SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 47450 47482 chr2L 52575 52598 jockey 12 5123 8.5 6.5 7.5 1.4 5148 chr2L 47450 intron Cda5 - chr2L 50024 intron Cda5 - chr2L 52598 intron Cda5 - chr2L_12_50001 chr2L_50001 RAL-513 2 chr2L 137597 137629 chr2L 137735 137768 8 139 3.0 5.0 4.0 1.6 171 chr2L 137597 intron CG11455 + chr2L 137682 intron CG11455 + chr2L 137768 intron CG11455 + chr2L_8_135001 chr2L_135001 RAL-513 3 chr2L 263281 263317 chr2L 263447 263450 17 160 2.5 3.5 3.0 4.2 169 chr2L 263281 intron,3` UTR CG3645 -,CG17075 - chr2L 263366 intron,3` UTR CG3645 -,CG17075 - chr2L 263450 intron,3` UTR CG3645 -,CG17075 - chr2L_17_260001 chr2L_260001 RAL-513 4 chr2L 325142 325156 chr2L 325213 325218 5 72 7.5 8.5 8.0 0.6 76 chr2L 325142 intron Plc21C + chr2L 325180 intron Plc21C + chr2L 325218 intron Plc21C + chr2L_5_325001 chr2L_325001 RAL-513 5 chr2L 347880 347908 chr2L 355400 355428 blood 8 7519 3.0 3.5 3.2 1.9 7548 chr2L 347880 3` UTR Plc21C + chr2L 351654 intron Plc21C + chr2L 355428 3` UTR Plc21C + chr2L_8_350001 chr2L_350001 RAL-513 6 chr2L 371430 371453 chr2L 371529 371552 6 99 4.5 7.5 6.0 0.9 122 chr2L 371430 intergenic not near genes chr2L 371491 intergenic not near genes chr2L 371552 intergenic not near genes chr2L_6_370001 chr2L_370001 RAL-513 7 chr2L 407928 407973 chr2L 408029 408048 12 97 3.5 4.0 3.8 2.5 120 chr2L 407928 3` UTR RpI135 + chr2L 407988 intergenic RpI135 +,AP-2alpha - chr2L 408048 3` UTR AP-2alpha - chr2L_12_405001 chr2L_405001 RAL-513 8 chr2L 467363 467494 chr2L 467453 467601 16 99 3.0 2.5 2.8 4.2 238 chr2L 467363 intron CG4297 - chr2L 467482 intron CG4297 - chr2L 467601 intron CG4297 - chr2L_16_465001 chr2L_465001 RAL-513 9 chr2L 590313 590341 chr2L 590425 590450 17 110 4.0 5.5 4.8 2.9 137 chr2L 590313 intron Gsc - chr2L 590382 intron Gsc - chr2L 590450 intron Gsc - chr2L_17_590001 chr2L_590001 RAL-513 10 chr2L 634987 635000 chr2L 635090 635107 4 106 4.5 8.0 6.2 0.6 120 chr2L 634987 intergenic not near genes chr2L 635047 intergenic not near genes chr2L 635107 intergenic not near genes chr2L_4_635001 chr2L_635001 RAL-513 11 chr2L 666277 666302 chr2L 666361 666396 4 92 2.0 0.5 1.2 1.8 119 chr2L 666277 intron ds - chr2L 666336 intron ds - chr2L 666396 intron ds - chr2L_4_665001 chr2L_665001 RAL-513 12 chr2L 686916 686948 chr2L 695963 696008 roo 5 9052 3.0 7.0 5.0 0.8 9092 chr2L 686916 intron ds - chr2L 691462 intron ds - chr2L 696008 intron ds - chr2L_5_690001 chr2L_690001 RAL-513 13 chr2L 764538 764576 chr2L 764658 764693 13 118 3.0 4.0 3.5 2.9 155 chr2L 764538 intergenic not near genes chr2L 764616 intergenic not near genes chr2L 764693 intergenic not near genes chr2L_13_760001 chr2L_760001 RAL-513 14 chr2L 778818 778861 chr2L 778916 778940 11 89 3.0 4.5 3.8 2.3 122 chr2L 778818 intergenic CG13947 + chr2L 778879 intergenic CG13947 + chr2L 778940 intergenic CG13947 + chr2L_11_775001 chr2L_775001 RAL-513 15 chr2L 922447 922494 chr2L 922545 922595 10 100 1.0 4.0 2.5 2.9 148 chr2L 922447 intergenic CG4341 + chr2L 922521 intergenic CG4341 + chr2L 922595 intergenic CG4341 + chr2L_10_920001 chr2L_920001 RAL-513 16 chr2L 927857 927880 chr2L 928005 928052 9 159 7.5 4.0 5.8 1.3 195 chr2L 927857 intron CG4341 + chr2L 927954 intron CG4341 + chr2L 928052 intron CG4341 + chr2L_9_925001 chr2L_925001 RAL-513 17 chr2L 936572 936584 chr2L 936682 936690 4 109 1.0 1.0 1.0 2.0 118 chr2L 936572 intron CG4341 + chr2L 936631 intron CG4341 + chr2L 936690 intron CG4341 + chr2L_4_935001 chr2L_935001 RAL-513 18 chr2L 976861 976890 chr2L 984517 984541 roo 6 7654 4.0 2.5 3.2 1.4 7680 chr2L 976861 intergenic not near genes chr2L 980701 intergenic not near genes chr2L 984541 intergenic not near genes chr2L_6_980001 chr2L_980001 RAL-513 19 chr2L 996718 996753 chr2L 1005832 1005842 roo 8 9110 2.0 4.0 3.0 2.0 9124 chr2L 996718 intergenic not near genes chr2L 1001280 intergenic not near genes chr2L 1005842 intergenic not near genes chr2L_8_1000001 chr2L_1000001 RAL-513 20 chr2L 1035545 1035594 chr2L 1035641 1035688 13 94 4.5 3.5 4.0 2.6 143 chr2L 1035545 intron IA-2 - chr2L 1035616 intron IA-2 - chr2L 1035688 intron IA-2 - chr2L_13_1035001 chr2L_1035001 RAL-513 21 chr2L 1156838 1156890 chr2L 1156963 1157013 11 119 5.5 3.5 4.5 2.0 175 chr2L 1156838 intron capt - chr2L 1156926 intron capt - chr2L 1157013 intron capt - chr2L_11_1155001 chr2L_1155001 RAL-513 22 chr2L 1220107 1220160 chr2L 1227593 1227616 blood 18 7479 2.0 2.5 2.2 5.6 7509 chr2L 1220107 intron CG42329 + chr2L 1223862 intron CG42329 + chr2L 1227616 intron CG42329 + chr2L_18_1220001 chr2L_1220001 RAL-513 23 chr2L 1261135 1261142 chr2L 1261237 1261244 4 102 0.0 0.0 0.0 4.0 109 chr2L 1261135 intron robo3 + chr2L 1261190 intron robo3 + chr2L 1261244 intron robo3 + chr2L_4_1260001 chr2L_1260001 RAL-513 24 chr2L 1261143 1261249 chr2L 1261215 1261342 9 89 0.0 0.0 0.0 9.0 199 chr2L 1261143 intron robo3 + chr2L 1261242 intron robo3 + chr2L 1261342 intron robo3 + chr2L_9_1260001 chr2L_1260001 RAL-513 25 chr2L 1336922 1336956 chr2L 1337181 1337219 7 256 2.0 6.5 4.2 1.3 297 chr2L 1336922 intergenic not near genes chr2L 1337070 intergenic not near genes chr2L 1337219 intergenic not near genes chr2L_7_1335001 chr2L_1335001 RAL-513 26 chr2L 1343510 1343558 chr2L 1343720 1343767 11 208 4.0 3.5 3.8 2.3 257 chr2L 1343510 exon CG33922 - chr2L 1343638 intron CG33922 - chr2L 1343767 exon CG33922 - chr2L_11_1340001 chr2L_1340001 RAL-513 27 chr2L 1503413 1503458 chr2L 1503505 1503552 14 93 3.0 6.0 4.5 2.5 139 chr2L 1503413 intron CR44064 + chr2L 1503482 intron CR44064 + chr2L 1503552 intron CR44064 + chr2L_14_1500001 chr2L_1500001 RAL-513 28 chr2L 1568803 1568817 chr2L 1568921 1568922 9 117 16.0 5.0 10.5 0.8 119 chr2L 1568803 intron haf + chr2L 1568862 intron haf + chr2L 1568922 intron haf + chr2L_9_1565001 chr2L_1565001 RAL-513 29 chr2L 1568818 1568855 chr2L 1568920 1568971 14 111 7.0 5.0 6.0 2.0 153 chr2L 1568818 intron haf + chr2L 1568894 intron haf + chr2L 1568971 intron haf + chr2L_14_1565001 chr2L_1565001 RAL-513 30 chr2L 1570674 1570717 chr2L 1573566 1573605 F-element 9 2889 3.0 4.5 3.8 1.9 2931 chr2L 1570674 intron haf + chr2L 1572140 intron haf + chr2L 1573605 intron haf + chr2L_9_1570001 chr2L_1570001 RAL-513 31 chr2L 1580291 1580339 chr2L 1580518 1580536 9 221 3.0 2.5 2.8 2.4 245 chr2L 1580291 intron haf + chr2L 1580414 intron haf + chr2L 1580536 intron haf + chr2L_9_1580001 chr2L_1580001 RAL-513 32 chr2L 1635419 1635432 chr2L 1635537 1635555 10 142 2.0 6.5 4.2 1.9 136 chr2L 1635419 intergenic not near genes chr2L 1635487 intergenic not near genes chr2L 1635555 intergenic not near genes chr2L_10_1635001 chr2L_1635001 RAL-513 33 chr2L 1678953 1679008 chr2L 1686456 1686490 blood 6 7490 0.0 8.5 4.2 1.2 7537 chr2L 1678953 intron chinmo + chr2L 1682722 intron chinmo + chr2L 1686490 intron chinmo + chr2L_6_1680001 chr2L_1680001 RAL-513 34 chr2L 1711347 1711382 chr2L 1711679 1711725 mdg3 6 336 3.5 3.0 3.2 1.4 378 chr2L 1711347 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711536 3` UTR frtz - chr2L 1711725 3` UTR frtz - chr2L_6_1710001 chr2L_1710001 RAL-513 35 chr2L 1721838 1721852 chr2L 1721908 1721955 5 96 0.5 2.5 1.5 2.0 117 chr2L 1721838 intron Rim2 - chr2L 1721896 intron Rim2 - chr2L 1721955 intron Rim2 - chr2L_5_1720001 chr2L_1720001 RAL-513 36 chr2L 1724797 1724831 chr2L 1724899 1724932 10 102 5.0 6.5 5.8 1.5 135 chr2L 1724797 3` UTR Eno - chr2L 1724864 3` UTR Eno - chr2L 1724932 3` UTR Eno - chr2L_10_1720001 chr2L_1720001 RAL-513 37 chr2L 1883400 1883450 chr2L 1884002 1884037 10 596 0.5 4.5 2.5 2.9 637 chr2L 1883400 intron CG15358 - chr2L 1883718 intron CG15358 - chr2L 1884037 exon CG15358 - chr2L_10_1880001 chr2L_1880001 RAL-513 38 chr2L 1930587 1930628 chr2L 1930684 1930725 16 94 3.0 4.5 3.8 3.3 138 chr2L 1930587 intron CG7337 + chr2L 1930656 intron CG7337 + chr2L 1930725 intron CG7337 + chr2L_16_1930001 chr2L_1930001 RAL-513 39 chr2L 2001798 2001816 chr2L 2001860 2001898 12 93 3.5 4.5 4.0 2.4 100 chr2L 2001798 intron,5` UTR CG33543 -,CR43464 + chr2L 2001848 intron,5` UTR CG33543 -,CR43464 + chr2L 2001898 intron,5` UTR CG33543 -,CR43464 + chr2L_12_2000001 chr2L_2000001 RAL-513 40 chr2L 2016117 2016159 chr2L 2016210 2016258 9 99 3.5 4.5 4.0 1.8 141 chr2L 2016117 intron CG4238 + chr2L 2016188 intron CG4238 + chr2L 2016258 intron CG4238 + chr2L_9_2015001 chr2L_2015001 RAL-513 41 chr2L 2047797 2047831 chr2L 2047998 2048015 7 206 3.0 0.5 1.8 2.5 218 chr2L 2047797 3` UTR Kebab + chr2L 2047906 3` UTR Kebab + chr2L 2048015 3` UTR Kebab + chr2L_7_2045001 chr2L_2045001 RAL-513 42 chr2L 2068799 2068835 chr2L 2068990 2069038 7 192 4.5 4.0 4.2 1.3 239 chr2L 2068799 intron dpr3 - chr2L 2068918 intron dpr3 - chr2L 2069038 intron dpr3 - chr2L_7_2065001 chr2L_2065001 RAL-513 43 chr2L 2100384 2100408 chr2L 2109527 2109547 roo 11 9151 4.0 6.0 5.0 1.8 9163 chr2L 2100384 intron dpr3 - chr2L 2104966 intron dpr3 - chr2L 2109547 intron dpr3 - chr2L_11_2100001 chr2L_2100001 RAL-513 44 chr2L 2112128 2112135 chr2L 2119775 2119777 opus 4 7656 1.5 4.0 2.8 1.1 7649 chr2L 2112128 intergenic not near genes chr2L 2115952 intergenic not near genes chr2L 2119777 intergenic not near genes chr2L_4_2115001 chr2L_2115001 RAL-513 45 chr2L 2121937 2121966 chr2L 2122108 2122113 14 166 3.5 3.0 3.2 3.3 176 chr2L 2121937 intergenic not near genes chr2L 2122025 intergenic not near genes chr2L 2122113 intergenic not near genes chr2L_14_2120001 chr2L_2120001 RAL-513 46 chr2L 2175935 2175981 chr2L 2176033 2176075 8 94 1.5 5.0 3.2 1.9 140 chr2L 2175935 intron aop - chr2L 2176005 intron aop - chr2L 2176075 intron aop - chr2L_8_2175001 chr2L_2175001 RAL-513 47 chr2L 2184330 2184380 chr2L 2184565 2184614 13 226 3.0 5.5 4.2 2.5 284 chr2L 2184330 intron CR43751 + chr2L 2184472 5` UTR CR43751 + chr2L 2184614 5` UTR CR43751 + chr2L_13_2180001 chr2L_2180001 RAL-513 48 chr2L 2260786 2260823 chr2L 2260892 2260929 7 106 5.5 2.0 3.8 1.5 143 chr2L 2260786 intergenic not near genes chr2L 2260858 intergenic not near genes chr2L 2260929 intergenic not near genes chr2L_7_2260001 chr2L_2260001 RAL-513 49 chr2L 2282965 2283013 chr2L 2283145 2283192 15 175 3.5 3.0 3.2 3.6 227 chr2L 2282965 intergenic not near genes chr2L 2283078 intergenic not near genes chr2L 2283192 intergenic not near genes chr2L_15_2280001 chr2L_2280001 RAL-513 50 chr2L 2321683 2321707 chr2L 2321750 2321790 12 82 1.0 2.5 1.8 4.3 107 chr2L 2321683 intron,intron CG9967 -,eys + chr2L 2321736 intron,intron CG9967 -,eys + chr2L 2321790 intron,intron CG9967 -,eys + chr2L_12_2320001 chr2L_2320001 RAL-513 51 chr2L 2331607 2331622 chr2L 2331703 2331718 8 96 6.5 8.0 7.2 1.0 111 chr2L 2331607 intron,intron CG9967 -,eys + chr2L 2331662 intron,intron CG9967 -,eys + chr2L 2331718 intron,intron CG9967 -,eys + chr2L_8_2330001 chr2L_2330001 RAL-513 52 chr2L 2372343 2372403 chr2L 2372449 2372483 5 101 0.0 5.5 2.8 1.3 140 chr2L 2372343 intergenic CG3609 - chr2L 2372413 intergenic CG3609 - chr2L 2372483 3` UTR CG3609 - chr2L_5_2370001 chr2L_2370001 RAL-513 53 chr2L 2398939 2398955 chr2L 2399018 2399053 8 86 1.0 6.5 3.8 1.7 114 chr2L 2398939 intron VGlut + chr2L 2398996 intron VGlut + chr2L 2399053 intron VGlut + chr2L_8_2395001 chr2L_2395001 RAL-513 54 chr2L 2453275 2453299 chr2L 2453387 2453411 5 110 10.5 7.0 8.8 0.5 136 chr2L 2453275 intron dpp + chr2L 2453343 intron dpp + chr2L 2453411 intron dpp + chr2L_5_2450001 chr2L_2450001 RAL-513 55 chr2L 2453310 2453321 chr2L 2453386 2453433 4 103 5.5 7.0 6.2 0.6 123 chr2L 2453310 intron dpp + chr2L 2453372 intron dpp + chr2L 2453433 intron dpp + chr2L_4_2450001 chr2L_2450001 RAL-513 56 chr2L 2472552 2472604 chr2L 2472750 2472801 17 191 2.0 4.0 3.0 4.2 249 chr2L 2472552 3` UTR CR45286 - chr2L 2472676 3` UTR CR45286 - chr2L 2472801 3` UTR CR45286 - chr2L_17_2470001 chr2L_2470001 RAL-513 57 chr2L 2560046 2560081 chr2L 2560156 2560173 5 103 3.5 7.0 5.2 0.8 127 chr2L 2560046 intergenic not near genes chr2L 2560110 intergenic not near genes chr2L 2560173 intergenic not near genes chr2L_5_2560001 chr2L_2560001 RAL-513 58 chr2L 2565537 2565563 chr2L 2571630 2571652 297 7 6092 4.5 7.0 5.8 1.0 6115 chr2L 2565537 exon Cyp309a2 - chr2L 2568594 intron Cyp309a2 - chr2L 2571652 exon Cyp309a2 - chr2L_7_2565001 chr2L_2565001 RAL-513 59 chr2L 2587801 2587845 chr2L 2587900 2587941 9 92 3.5 5.0 4.2 1.7 140 chr2L 2587801 intergenic not near genes chr2L 2587871 intergenic not near genes chr2L 2587941 intergenic not near genes chr2L_9_2585001 chr2L_2585001 RAL-513 60 chr2L 2618016 2618064 chr2L 2618115 2618142 14 94 3.0 3.5 3.2 3.3 126 chr2L 2618016 intergenic not near genes chr2L 2618079 intergenic not near genes chr2L 2618142 intergenic not near genes chr2L_14_2615001 chr2L_2615001 RAL-513 61 chr2L 2661224 2661231 chr2L 2663033 2663057 I-element 5 1829 1.5 2.0 1.8 1.8 1833 chr2L 2661224 intergenic not near genes chr2L 2662140 intergenic not near genes chr2L 2663057 intergenic not near genes chr2L_5_2660001 chr2L_2660001 RAL-513 62 chr2L 2713511 2713545 chr2L 2713614 2713647 14 108 6.5 4.5 5.5 2.2 136 chr2L 2713511 intron CG31690 + chr2L 2713579 intron CG31690 + chr2L 2713647 intron CG31690 + chr2L_14_2710001 chr2L_2710001 RAL-513 63 chr2L 2724417 2724439 chr2L 2724487 2724534 7 90 3.0 1.0 2.0 2.3 117 chr2L 2724417 intergenic not near genes chr2L 2724476 intergenic not near genes chr2L 2724534 intergenic not near genes chr2L_7_2720001 chr2L_2720001 RAL-513 64 chr2L 2826517 2826575 chr2L 2826629 2826691 15 109 0.0 0.0 0.0 15.0 174 chr2L 2826517 intron Duox - chr2L 2826604 intron Duox - chr2L 2826691 intron Duox - chr2L_15_2825001 chr2L_2825001 RAL-513 65 chr2L 2864336 2864352 chr2L 2864609 2864638 13 283 2.5 6.5 4.5 2.4 302 chr2L 2864336 intron CG2991 + chr2L 2864487 intron CG2991 + chr2L 2864638 intron CG2991 + chr2L_13_2860001 chr2L_2860001 RAL-513 66 chr2L 2933280 2933289 chr2L 2935485 2935489 pogo 5 2205 4.0 5.5 4.8 0.9 2209 chr2L 2933280 intron lilli + chr2L 2934384 intron lilli + chr2L 2935489 intron lilli + chr2L_5_2930001 chr2L_2930001 RAL-513 67 chr2L 2937401 2937451 chr2L 2937498 2937547 17 95 5.0 4.0 4.5 3.1 146 chr2L 2937401 intron lilli + chr2L 2937474 intron lilli + chr2L 2937547 intron lilli + chr2L_17_2935001 chr2L_2935001 RAL-513 68 chr2L 2964629 2964649 chr2L 2964722 2964741 5 102 0.5 5.0 2.8 1.3 112 chr2L 2964629 3` UTR Rbp9 + chr2L 2964685 3` UTR Rbp9 + chr2L 2964741 3` UTR Rbp9 + chr2L_5_2960001 chr2L_2960001 RAL-513 69 chr2L 3073010 3073058 chr2L 3078233 3078281 copia 17 5220 4.5 3.5 4.0 3.4 5271 chr2L 3073010 intron toc - chr2L 3075646 intron toc - chr2L 3078281 intron toc - chr2L_17_3075001 chr2L_3075001 RAL-513 70 chr2L 3108855 3108892 chr2L 3108945 3108989 6 94 1.5 0.5 1.0 3.0 134 chr2L 3108855 exon toc - chr2L 3108922 intron toc - chr2L 3108989 intron toc - chr2L_6_3105001 chr2L_3105001 RAL-513 71 chr2L 3112459 3112495 chr2L 3112556 3112564 7 94 4.5 2.0 3.2 1.7 105 chr2L 3112459 intron toc - chr2L 3112512 intron toc - chr2L 3112564 intron toc - chr2L_7_3110001 chr2L_3110001 RAL-513 72 chr2L 3134276 3134291 chr2L 3134372 3134387 6 96 4.5 9.5 7.0 0.8 111 chr2L 3134276 intron toc - chr2L 3134332 intron toc - chr2L 3134387 intron toc - chr2L_6_3130001 chr2L_3130001 RAL-513 73 chr2L 3147256 3147304 chr2L 3147351 3147401 18 90 5.0 3.0 4.0 3.6 145 chr2L 3147256 3` UTR Mad - chr2L 3147328 3` UTR Mad - chr2L 3147401 3` UTR Mad - chr2L_18_3145001 chr2L_3145001 RAL-513 74 chr2L 3156533 3156560 chr2L 3156650 3156677 8 114 0.5 7.5 4.0 1.6 144 chr2L 3156533 intron Mad - chr2L 3156605 intron Mad - chr2L 3156677 intron Mad - chr2L_8_3155001 chr2L_3155001 RAL-513 75 chr2L 3175887 3175933 chr2L 3175986 3176032 12 97 3.5 4.0 3.8 2.5 145 chr2L 3175887 intron CG34393 - chr2L 3175960 intron CG34393 - chr2L 3176032 intron CG34393 - chr2L_12_3175001 chr2L_3175001 RAL-513 76 chr2L 3186451 3186499 chr2L 3186557 3186577 8 101 3.5 3.5 3.5 1.8 126 chr2L 3186451 intron CG34393 - chr2L 3186514 intron CG34393 - chr2L 3186577 intron CG34393 - chr2L_8_3185001 chr2L_3185001 RAL-513 77 chr2L 3202721 3202767 chr2L 3210170 3210215 mdg1 7 7448 2.0 1.5 1.8 2.5 7494 chr2L 3202721 intergenic not near genes chr2L 3206468 intergenic not near genes chr2L 3210215 intergenic CR45336 + chr2L_7_3205001 chr2L_3205001 RAL-513 78 chr2L 3211648 3211684 chr2L 3212613 3212656 5 969 7.5 3.0 5.2 0.8 1008 chr2L 3211648 intergenic CR45336 + chr2L 3212152 intergenic not near genes chr2L 3212656 intergenic not near genes chr2L_5_3210001 chr2L_3210001 RAL-513 79 chr2L 3251482 3251497 chr2L 3259067 3259082 springer 6 7585 8.5 9.0 8.8 0.6 7600 chr2L 3251482 intergenic not near genes chr2L 3255282 intergenic not near genes chr2L 3259082 intergenic not near genes chr2L_6_3255001 chr2L_3255001 RAL-513 80 chr2L 3251501 3251522 chr2L 3259065 3259106 springer 5 7576 6.5 8.0 7.2 0.6 7605 chr2L 3251501 intergenic not near genes chr2L 3255304 intergenic not near genes chr2L 3259106 intergenic not near genes chr2L_5_3255001 chr2L_3255001 RAL-513 81 chr2L 3291227 3291270 chr2L 3291326 3291370 12 98 2.0 4.0 3.0 3.0 143 chr2L 3291227 intergenic CG9664 - chr2L 3291298 3` UTR CG9664 - chr2L 3291370 3` UTR CG9664 - chr2L_12_3290001 chr2L_3290001 RAL-513 82 chr2L 3312083 3312113 chr2L 3312188 3312222 8 117 0.0 1.0 0.5 5.3 139 chr2L 3312083 intron CG3277 + chr2L 3312152 intron CG3277 + chr2L 3312222 intron CG3277 + chr2L_8_3310001 chr2L_3310001 RAL-513 83 chr2L 3323238 3323284 chr2L 3323365 3323411 18 121 3.5 5.5 4.5 3.3 173 chr2L 3323238 intergenic CG8837 + chr2L 3323324 intergenic CG8837 + chr2L 3323411 intergenic CG8837 + chr2L_18_3320001 chr2L_3320001 RAL-513 84 chr2L 3388578 3388627 chr2L 3388839 3388888 pogo 6 260 4.5 4.0 4.2 1.2 310 chr2L 3388578 intergenic CG42460 - chr2L 3388733 intergenic CG42460 - chr2L 3388888 intergenic CG42460 -,CR44791 + chr2L_6_3385001 chr2L_3385001 RAL-513 85 chr2L 3556933 3556963 chr2L 3557029 3557051 5 86 0.0 3.5 1.8 1.8 118 chr2L 3556933 intergenic not near genes chr2L 3556992 intergenic not near genes chr2L 3557051 intergenic not near genes chr2L_5_3555001 chr2L_3555001 RAL-513 86 chr2L 3634101 3634128 chr2L 3634203 3634230 8 101 5.5 9.0 7.2 1.0 129 chr2L 3634101 intron for - chr2L 3634166 intron for - chr2L 3634230 intron for - chr2L_8_3630001 chr2L_3630001 RAL-513 87 chr2L 3647177 3647196 chr2L 3647460 3647479 9 300 5.0 2.0 3.5 2.0 302 chr2L 3647177 intron for - chr2L 3647328 intron for - chr2L 3647479 intron for - chr2L_9_3645001 chr2L_3645001 RAL-513 88 chr2L 3649786 3649802 chr2L 3654993 3655024 copia 6 5220 0.0 5.0 2.5 1.7 5238 chr2L 3649786 intron for - chr2L 3652405 intron for - chr2L 3655024 intron for - chr2L_6_3650001 chr2L_3650001 RAL-513 89 chr2L 3686028 3686045 chr2L 3686132 3686153 6 107 1.5 4.0 2.8 1.6 125 chr2L 3686028 intron CG34340 + chr2L 3686090 intron CG34340 + chr2L 3686153 intron CG34340 + chr2L_6_3685001 chr2L_3685001 RAL-513 90 chr2L 3740107 3740142 chr2L 3740540 3740574 10 428 5.0 5.0 5.0 1.7 467 chr2L 3740107 intron CG10019 + chr2L 3740340 intron CG10019 + chr2L 3740574 intron CG10019 + chr2L_10_3740001 chr2L_3740001 RAL-513 91 chr2L 3819010 3819058 chr2L 3819112 3819160 9 101 3.5 0.0 1.8 3.2 150 chr2L 3819010 intergenic CR44077 + chr2L 3819085 intergenic not near genes chr2L 3819160 intergenic not near genes chr2L_9_3815001 chr2L_3815001 RAL-513 92 chr2L 3939232 3939271 chr2L 3939328 3939351 4 92 5.0 7.0 6.0 0.6 119 chr2L 3939232 intron fred - chr2L 3939292 intron fred - chr2L 3939351 intron fred - chr2L_4_3935001 chr2L_3935001 RAL-513 93 chr2L 3950082 3950102 chr2L 3950158 3950198 7 88 3.5 1.5 2.5 2.0 116 chr2L 3950082 intron fred - chr2L 3950140 intron fred - chr2L 3950198 intron fred - chr2L_7_3950001 chr2L_3950001 RAL-513 94 chr2L 3952115 3952154 chr2L 3952256 3952279 6 138 4.0 3.5 3.8 1.2 164 chr2L 3952115 intron fred - chr2L 3952197 intron fred - chr2L 3952279 intron fred - chr2L_6_3950001 chr2L_3950001 RAL-513 95 chr2L 3997526 3997575 chr2L 3997635 3997682 4 108 0.0 6.0 3.0 1.0 156 chr2L 3997526 intergenic not near genes chr2L 3997604 intergenic not near genes chr2L 3997682 intergenic not near genes chr2L_4_3995001 chr2L_3995001 RAL-513 96 chr2L 4008246 4008293 chr2L 4008351 4008377 13 99 3.0 4.0 3.5 2.9 131 chr2L 4008246 intergenic CG43773 +,CG43774 + chr2L 4008312 intergenic CG43773 +,CG43774 + chr2L 4008377 intergenic CG43774 +,CG43773 + chr2L_13_4005001 chr2L_4005001 RAL-513 97 chr2L 4014634 4014684 chr2L 4014797 4014827 11 156 2.5 2.0 2.2 3.4 193 chr2L 4014634 intergenic not near genes chr2L 4014730 intergenic not near genes chr2L 4014827 intergenic not near genes chr2L_11_4010001 chr2L_4010001 RAL-513 98 chr2L 4037781 4037801 chr2L 4037888 4037908 6 107 4.5 2.0 3.2 1.4 127 chr2L 4037781 intron ed + chr2L 4037844 intron ed + chr2L 4037908 intron ed + chr2L_6_4035001 chr2L_4035001 RAL-513 99 chr2L 4039006 4039012 chr2L 4039102 4039107 4 96 2.0 5.0 3.5 0.9 101 chr2L 4039006 intron ed + chr2L 4039056 intron ed + chr2L 4039107 intron ed + chr2L_4_4035001 chr2L_4035001 RAL-513 100 chr2L 4066024 4066061 chr2L 4068866 4068875 Juan 7 2833 8.0 4.0 6.0 1.0 2851 chr2L 4066024 intron ed + chr2L 4067450 intron ed + chr2L 4068875 intron ed + chr2L_7_4065001 chr2L_4065001 RAL-513 101 chr2L 4166357 4166408 chr2L 4166459 4166507 24 100 5.0 3.0 4.0 4.8 150 chr2L 4166357 intergenic Or24a - chr2L 4166432 intergenic Or24a - chr2L 4166507 intergenic Or24a - chr2L_24_4165001 chr2L_4165001 RAL-513 102 chr2L 4184466 4184500 chr2L 4184805 4184839 5 339 0.5 2.5 1.5 2.0 373 chr2L 4184466 intergenic not near genes chr2L 4184652 intergenic not near genes chr2L 4184839 intergenic not near genes chr2L_5_4180001 chr2L_4180001 RAL-513 103 chr2L 4192967 4193008 chr2L 4193065 4193079 15 97 4.5 6.0 5.2 2.4 112 chr2L 4192967 intron CG3714 - chr2L 4193023 intron CG3714 - chr2L 4193079 intron CG3714 - chr2L_15_4190001 chr2L_4190001 RAL-513 104 chr2L 4262567 4262616 chr2L 4262847 4262895 21 277 6.0 1.5 3.8 4.4 328 chr2L 4262567 intergenic not near genes chr2L 4262731 intergenic not near genes chr2L 4262895 intergenic not near genes chr2L_21_4260001 chr2L_4260001 RAL-513 105 chr2L 4266521 4266554 chr2L 4266612 4266653 6 88 0.5 0.0 0.2 5.0 132 chr2L 4266521 intergenic not near genes chr2L 4266587 intergenic not near genes chr2L 4266653 intergenic not near genes chr2L_6_4265001 chr2L_4265001 RAL-513 106 chr2L 4288292 4288322 chr2L 4288394 4288407 7 105 0.0 2.5 1.2 3.2 115 chr2L 4288292 intron tutl + chr2L 4288350 intron tutl + chr2L 4288407 intron tutl + chr2L_7_4285001 chr2L_4285001 RAL-513 107 chr2L 4325617 4325632 chr2L 4325826 4325840 5 209 3.0 2.5 2.8 1.3 223 chr2L 4325617 intron CG16857 + chr2L 4325728 intron CG16857 + chr2L 4325840 intron CG16857 + chr2L_5_4325001 chr2L_4325001 RAL-513 108 chr2L 4351455 4351502 chr2L 4351551 4351577 18 92 6.0 6.0 6.0 2.6 122 chr2L 4351455 intergenic CR44700 + chr2L 4351516 intergenic CR44700 + chr2L 4351577 intergenic CR44700 + chr2L_18_4350001 chr2L_4350001 RAL-513 109 chr2L 4586954 4586995 chr2L 4587062 4587107 13 110 1.5 2.0 1.8 4.6 153 chr2L 4586954 intron dp - chr2L 4587030 intron dp - chr2L 4587107 intron dp - chr2L_13_4585001 chr2L_4585001 RAL-513 110 chr2L 4601715 4601735 chr2L 4609160 4609196 mdg1 5 7448 2.0 7.0 4.5 0.9 7481 chr2L 4601715 intron dp - chr2L 4605456 intron dp - chr2L 4609196 intron dp - chr2L_5_4605001 chr2L_4605001 RAL-513 111 chr2L 4661826 4661852 chr2L 4669426 4669452 opus 8 7600 3.5 5.5 4.5 1.5 7626 chr2L 4661826 intergenic not near genes chr2L 4665639 intergenic not near genes chr2L 4669452 intergenic not near genes chr2L_8_4665001 chr2L_4665001 RAL-513 112 chr2L 4681280 4681322 chr2L 4681561 4681599 10 280 4.5 4.5 4.5 1.8 319 chr2L 4681280 intergenic not near genes chr2L 4681440 intergenic not near genes chr2L 4681599 intergenic not near genes chr2L_10_4680001 chr2L_4680001 RAL-513 113 chr2L 4725005 4725061 chr2L 4725517 4725574 16 512 3.0 4.5 3.8 3.3 569 chr2L 4725005 intergenic not near genes chr2L 4725290 intergenic not near genes chr2L 4725574 intergenic not near genes chr2L_16_4725001 chr2L_4725001 RAL-513 114 chr2L 4792708 4792757 chr2L 4792835 4792884 7 126 3.0 5.0 4.0 1.4 176 chr2L 4792708 intron CG15630 - chr2L 4792796 intron CG15630 - chr2L 4792884 intron CG15630 - chr2L_7_4790001 chr2L_4790001 RAL-513 115 chr2L 4803750 4803769 chr2L 4803945 4803956 7 191 13.0 7.0 10.0 0.6 206 chr2L 4803750 intergenic not near genes chr2L 4803853 intergenic not near genes chr2L 4803956 intergenic not near genes chr2L_7_4800001 chr2L_4800001 RAL-513 116 chr2L 4803778 4803799 chr2L 4803943 4803962 6 176 6.5 7.0 6.8 0.8 184 chr2L 4803778 intergenic not near genes chr2L 4803870 intergenic not near genes chr2L 4803962 intergenic not near genes chr2L_6_4800001 chr2L_4800001 RAL-513 117 chr2L 4819472 4819511 chr2L 4819615 4819654 9 136 4.0 4.5 4.2 1.7 182 chr2L 4819472 intergenic not near genes chr2L 4819563 intergenic not near genes chr2L 4819654 intergenic not near genes chr2L_9_4815001 chr2L_4815001 RAL-513 118 chr2L 4862277 4862311 chr2L 4862363 4862368 15 85 6.5 4.0 5.2 2.4 91 chr2L 4862277 intron pog + chr2L 4862322 intron pog + chr2L 4862368 intron pog + chr2L_15_4860001 chr2L_4860001 RAL-513 119 chr2L 4896426 4896478 chr2L 4896538 4896579 12 109 5.5 2.0 3.8 2.5 153 chr2L 4896426 intron CG3036 + chr2L 4896502 intron CG3036 + chr2L 4896579 intron CG3036 + chr2L_12_4895001 chr2L_4895001 RAL-513 120 chr2L 4918150 4918192 chr2L 4923239 4923323 jockey 5 5094 3.0 1.5 2.2 1.6 5173 chr2L 4918150 intron hoe1 - chr2L 4920736 intron hoe1 - chr2L 4923323 intron hoe1 - chr2L_5_4920001 chr2L_4920001 RAL-513 121 chr2L 4953504 4953536 chr2L 4953765 4953781 pogo 7 258 4.5 4.0 4.2 1.3 277 chr2L 4953504 intergenic Jon25Bii - chr2L 4953642 intergenic not near genes chr2L 4953781 intergenic Jon25Bi - chr2L_7_4950001 chr2L_4950001 RAL-513 122 chr2L 5092392 5092443 chr2L 5092498 5092550 6 104 1.5 1.0 1.2 2.7 158 chr2L 5092392 intron pgant5 - chr2L 5092471 intron pgant5 - chr2L 5092550 intron pgant5 - chr2L_6_5090001 chr2L_5090001 RAL-513 123 chr2L 5117282 5117311 chr2L 5117384 5117386 7 93 7.5 6.5 7.0 0.9 104 chr2L 5117282 intron Msp300 + chr2L 5117334 intron Msp300 + chr2L 5117386 intron Msp300 + chr2L_7_5115001 chr2L_5115001 RAL-513 124 chr2L 5262522 5262533 chr2L 5262612 5262630 5 93 4.5 3.0 3.8 1.0 108 chr2L 5262522 intron tkv - chr2L 5262576 intron tkv - chr2L 5262630 intron tkv - chr2L_5_5260001 chr2L_5260001 RAL-513 125 chr2L 5297875 5297880 chr2L 5297956 5297964 4 86 0.0 8.0 4.0 0.8 89 chr2L 5297875 intron,3` UTR vri +,CR45730 - chr2L 5297920 intron,3` UTR vri +,CR45730 - chr2L 5297964 intron vri + chr2L_4_5295001 chr2L_5295001 RAL-513 126 chr2L 5342767 5342796 chr2L 5345167 5345183 Doc 7 2394 4.5 6.0 5.2 1.1 2416 chr2L 5342767 intergenic not near genes chr2L 5343975 intergenic not near genes chr2L 5345183 intergenic not near genes chr2L_7_5340001 chr2L_5340001 RAL-513 127 chr2L 5500046 5500065 chr2L 5500152 5500171 4 105 5.5 4.0 4.8 0.7 125 chr2L 5500046 intergenic not near genes chr2L 5500108 intergenic not near genes chr2L 5500171 intergenic not near genes chr2L_4_5500001 chr2L_5500001 RAL-513 128 chr2L 5500066 5500079 chr2L 5500142 5500179 5 98 5.0 2.5 3.8 1.0 113 chr2L 5500066 intergenic not near genes chr2L 5500122 intergenic not near genes chr2L 5500179 intergenic not near genes chr2L_5_5500001 chr2L_5500001 RAL-513 129 chr2L 5515202 5515244 chr2L 5515324 5515366 13 121 4.5 1.5 3.0 3.2 164 chr2L 5515202 intergenic not near genes chr2L 5515284 intergenic not near genes chr2L 5515366 intergenic not near genes chr2L_13_5515001 chr2L_5515001 RAL-513 130 chr2L 5516639 5516669 chr2L 5516738 5516768 6 99 4.0 3.5 3.8 1.2 129 chr2L 5516639 intergenic not near genes chr2L 5516704 intergenic not near genes chr2L 5516768 intergenic not near genes chr2L_6_5515001 chr2L_5515001 RAL-513 131 chr2L 5695873 5695892 chr2L 5695955 5695986 5 94 2.5 5.5 4.0 1.0 113 chr2L 5695873 intergenic not near genes chr2L 5695930 intergenic not near genes chr2L 5695986 intergenic not near genes chr2L_5_5695001 chr2L_5695001 RAL-513 132 chr2L 5758324 5758369 chr2L 5758587 5758605 11 259 4.0 5.0 4.5 2.0 281 chr2L 5758324 intron CG11030 + chr2L 5758464 intron CG11030 + chr2L 5758605 intron CG11030 + chr2L_11_5755001 chr2L_5755001 RAL-513 133 chr2L 5819655 5819673 chr2L 5819759 5819777 4 104 8.5 3.0 5.8 0.6 122 chr2L 5819655 intergenic not near genes chr2L 5819716 intergenic not near genes chr2L 5819777 intergenic not near genes chr2L_4_5815001 chr2L_5815001 RAL-513 134 chr2L 5819674 5819699 chr2L 5819757 5819802 10 97 3.0 3.0 3.0 2.5 128 chr2L 5819674 intergenic not near genes chr2L 5819738 intergenic not near genes chr2L 5819802 intergenic not near genes chr2L_10_5815001 chr2L_5815001 RAL-513 135 chr2L 5827699 5827741 chr2L 5836721 5836764 roo 13 9020 6.5 9.0 7.8 1.5 9065 chr2L 5827699 intron TrissinR + chr2L 5832232 intron TrissinR + chr2L 5836764 intron TrissinR + chr2L_13_5830001 chr2L_5830001 RAL-513 136 chr2L 5887594 5887634 chr2L 5887687 5887735 16 95 2.0 6.5 4.2 3.1 141 chr2L 5887594 3` UTR CR44577 - chr2L 5887664 3` UTR CR44577 - chr2L 5887735 3` UTR CR44577 - chr2L_16_5885001 chr2L_5885001 RAL-513 137 chr2L 5904452 5904475 chr2L 5904540 5904540 8 93 3.0 0.5 1.8 2.9 88 chr2L 5904452 exon CG9021 - chr2L 5904496 intron CG9021 - chr2L 5904540 intron CG9021 - chr2L_8_5900001 chr2L_5900001 RAL-513 138 chr2L 5926591 5926627 chr2L 5926690 5926726 4 99 1.5 0.5 1.0 2.0 135 chr2L 5926591 intron dsf + chr2L 5926658 intron dsf + chr2L 5926726 intron dsf + chr2L_4_5925001 chr2L_5925001 RAL-513 139 chr2L 5962249 5962299 chr2L 5962345 5962395 7 89 4.0 3.5 3.8 1.5 146 chr2L 5962249 intergenic not near genes chr2L 5962322 intergenic not near genes chr2L 5962395 intergenic not near genes chr2L_7_5960001 chr2L_5960001 RAL-513 140 chr2L 5981277 5981310 chr2L 5981386 5981419 5 106 4.0 3.0 3.5 1.1 142 chr2L 5981277 intergenic chic -,eIF-4a + chr2L 5981348 intergenic chic -,eIF-4a + chr2L 5981419 intergenic eIF-4a +,chic - chr2L_5_5980001 chr2L_5980001 RAL-513 141 chr2L 6007098 6007104 chr2L 6007185 6007199 5 92 5.0 1.0 3.0 1.2 101 chr2L 6007098 intergenic CG9098 -,Gal - chr2L 6007148 intergenic CG9098 -,Gal - chr2L 6007199 intergenic CG9098 -,Gal - chr2L_5_6005001 chr2L_6005001 RAL-513 142 chr2L 6050437 6050464 chr2L 6050559 6050588 8 122 4.5 3.5 4.0 1.6 151 chr2L 6050437 3` UTR CG12393 + chr2L 6050512 intergenic CG12393 +,CG9135 + chr2L 6050588 intergenic CG12393 +,CG9135 + chr2L_8_6050001 chr2L_6050001 RAL-513 143 chr2L 6086214 6086246 chr2L 6086341 6086363 11 126 2.5 4.5 3.5 2.4 149 chr2L 6086214 intron Kr-h1 + chr2L 6086288 intron Kr-h1 + chr2L 6086363 intron Kr-h1 + chr2L_11_6085001 chr2L_6085001 RAL-513 144 chr2L 6130753 6130794 chr2L 6130858 6130898 5 99 2.0 0.0 1.0 2.5 145 chr2L 6130753 intergenic CG42730 -,tectonic -,CG9222 + chr2L 6130826 intergenic CG42730 -,tectonic -,CG9222 + chr2L 6130898 intergenic CG9222 +,CG42730 -,tectonic - chr2L_5_6130001 chr2L_6130001 RAL-513 145 chr2L 6136534 6136580 chr2L 6136650 6136695 5 108 1.0 3.5 2.2 1.6 161 chr2L 6136534 intergenic not near genes chr2L 6136614 intergenic not near genes chr2L 6136695 intergenic not near genes chr2L_5_6135001 chr2L_6135001 RAL-513 146 chr2L 6213676 6213709 chr2L 6213759 6213811 17 82 3.5 5.5 4.5 3.1 135 chr2L 6213676 intergenic not near genes chr2L 6213744 intergenic not near genes chr2L 6213811 intergenic not near genes chr2L_17_6210001 chr2L_6210001 RAL-513 147 chr2L 6243927 6243960 chr2L 6246292 6246324 7 2364 1.0 4.0 2.5 2.0 2397 chr2L 6243927 intergenic not near genes chr2L 6245126 intergenic not near genes chr2L 6246324 intergenic not near genes chr2L_7_6245001 chr2L_6245001 RAL-513 148 chr2L 6253606 6253634 chr2L 6253702 6253730 4 95 6.0 2.5 4.2 0.8 124 chr2L 6253606 intron Ddr + chr2L 6253668 intron Ddr + chr2L 6253730 intron Ddr + chr2L_4_6250001 chr2L_6250001 RAL-513 149 chr2L 6279623 6279649 chr2L 6279721 6279748 INE-1 7 98 6.0 0.5 3.2 1.7 125 chr2L 6279623 intron Ddr + chr2L 6279686 intron Ddr + chr2L 6279748 intron Ddr + chr2L_7_6275001 chr2L_6275001 RAL-513 150 chr2L 6283922 6283979 chr2L 6284053 6284084 10 121 0.5 1.5 1.0 5.0 162 chr2L 6283922 intron Ddr + chr2L 6284003 intron Ddr + chr2L 6284084 intron Ddr + chr2L_10_6280001 chr2L_6280001 RAL-513 151 chr2L 6349061 6349071 chr2L 6349158 6349169 4 98 1.5 2.5 2.0 1.3 108 chr2L 6349061 intergenic CG9498 - chr2L 6349115 intergenic CG9498 - chr2L 6349169 intergenic CG9498 - chr2L_4_6345001 chr2L_6345001 RAL-513 152 chr2L 6363130 6363151 chr2L 6366071 6366093 Burdock 4 2942 2.5 7.5 5.0 0.7 2963 chr2L 6363130 intergenic not near genes chr2L 6364612 intergenic not near genes chr2L 6366093 intergenic not near genes chr2L_4_6360001 chr2L_6360001 RAL-513 153 chr2L 6363158 6363179 chr2L 6366070 6366118 Burdock 7 2926 2.0 7.0 4.5 1.3 2960 chr2L 6363158 intergenic not near genes chr2L 6364638 intergenic not near genes chr2L 6366118 intergenic not near genes chr2L_7_6360001 chr2L_6360001 RAL-513 154 chr2L 6426839 6426887 chr2L 6445116 6445166 roo 14 18271 5.0 3.0 4.0 2.8 18327 chr2L 6426839 3` UTR CG9527 - chr2L 6436002 intron CG9527 - chr2L 6445166 exon CG9527 - chr2L_14_6435001 chr2L_6435001 RAL-513 155 chr2L 6470648 6470672 chr2L 6470761 6470785 10 109 6.5 1.0 3.8 2.1 137 chr2L 6470648 intron mmy - chr2L 6470716 intron mmy - chr2L 6470785 intron mmy - chr2L_10_6470001 chr2L_6470001 RAL-513 156 chr2L 6470677 6470700 chr2L 6470759 6470784 10 103 4.0 0.5 2.2 3.1 107 chr2L 6470677 intron mmy - chr2L 6470730 intron mmy - chr2L 6470784 intron mmy - chr2L_10_6470001 chr2L_6470001 RAL-513 157 chr2L 6504956 6504991 chr2L 6505065 6505085 10 105 4.5 2.0 3.2 2.4 129 chr2L 6504956 intron CG31637 + chr2L 6505020 intron CG31637 + chr2L 6505085 intron CG31637 + chr2L_10_6505001 chr2L_6505001 RAL-513 158 chr2L 6537123 6537164 chr2L 6537221 6537262 9 95 1.5 1.0 1.2 4.1 139 chr2L 6537123 intron eya - chr2L 6537192 intron eya - chr2L 6537262 intron eya - chr2L_9_6535001 chr2L_6535001 RAL-513 159 chr2L 6626879 6626915 chr2L 6626969 6627019 15 96 7.5 4.0 5.8 2.2 140 chr2L 6626879 intron Oatp26F - chr2L 6626949 intron Oatp26F - chr2L 6627019 intron Oatp26F - chr2L_15_6625001 chr2L_6625001 RAL-513 160 chr2L 6655513 6655538 chr2L 6655888 6655920 6 377 5.0 4.0 4.5 1.1 407 chr2L 6655513 exon CG31633 - chr2L 6655716 exon CG31633 - chr2L 6655920 exon CG31633 - chr2L_6_6655001 chr2L_6655001 RAL-513 161 chr2L 6771990 6772017 chr2L 6772071 6772103 7 91 6.5 4.0 5.2 1.1 113 chr2L 6771990 intron CG11321 - chr2L 6772046 intron CG11321 - chr2L 6772103 intron CG11321 - chr2L_7_6770001 chr2L_6770001 RAL-513 162 chr2L 6772571 6772597 chr2L 6772674 6772684 6 98 6.5 8.0 7.2 0.7 113 chr2L 6772571 5` UTR CG11321 - chr2L 6772628 5` UTR CG11321 - chr2L 6772684 5` UTR CG11321 - chr2L_6_6770001 chr2L_6770001 RAL-513 163 chr2L 7041257 7041277 chr2L 7041366 7041386 4 109 0.0 2.0 1.0 2.0 129 chr2L 7041257 intron milt + chr2L 7041322 intron milt + chr2L 7041386 intron milt + chr2L_4_7040001 chr2L_7040001 RAL-513 164 chr2L 7077144 7077183 chr2L 7077309 7077347 4 164 2.0 7.5 4.8 0.7 203 chr2L 7077144 intron Pvf2 - chr2L 7077246 intron Pvf2 - chr2L 7077347 intron Pvf2 - chr2L_4_7075001 chr2L_7075001 RAL-513 165 chr2L 7125774 7125800 chr2L 7125910 7125934 5 135 2.5 2.0 2.2 1.6 160 chr2L 7125774 intron Pvf3 - chr2L 7125854 intron Pvf3 - chr2L 7125934 intron Pvf3 - chr2L_5_7125001 chr2L_7125001 RAL-513 166 chr2L 7197978 7198019 chr2L 7198076 7198118 11 96 3.5 4.0 3.8 2.3 140 chr2L 7197978 intron CG4502 - chr2L 7198048 intron CG4502 - chr2L 7198118 intron CG4502 - chr2L_11_7195001 chr2L_7195001 RAL-513 167 chr2L 7254525 7254539 chr2L 7254623 7254637 5 98 0.0 6.0 3.0 1.2 112 chr2L 7254525 intergenic not near genes chr2L 7254581 intergenic not near genes chr2L 7254637 intergenic not near genes chr2L_5_7250001 chr2L_7250001 RAL-513 168 chr2L 7325902 7325927 chr2L 7325998 7326005 4 95 4.5 2.5 3.5 0.9 103 chr2L 7325902 intergenic not near genes chr2L 7325954 intergenic not near genes chr2L 7326005 intergenic not near genes chr2L_4_7325001 chr2L_7325001 RAL-513 169 chr2L 7343331 7343358 chr2L 7350447 7350479 roo 6 7129 3.0 3.5 3.2 1.4 7148 chr2L 7343331 intron Wnt6 + chr2L 7346905 intron Wnt6 + chr2L 7350479 intron Wnt6 + chr2L_6_7345001 chr2L_7345001 RAL-513 170 chr2L 7405759 7405764 chr2L 7405859 7405864 5 100 6.5 0.5 3.5 1.1 105 chr2L 7405759 exon CG5177 + chr2L 7405812 intron CG5177 + chr2L 7405864 intron CG5177 + chr2L_5_7405001 chr2L_7405001 RAL-513 171 chr2L 7406949 7406969 chr2L 7407053 7407094 4 112 0.5 0.5 0.5 2.7 145 chr2L 7406949 intron CG5177 + chr2L 7407022 intron CG5177 + chr2L 7407094 intron CG5177 + chr2L_4_7405001 chr2L_7405001 RAL-513 172 chr2L 7489688 7489716 chr2L 7489791 7489796 5 98 5.5 3.0 4.2 1.0 108 chr2L 7489688 intron Ziz - chr2L 7489742 intron Ziz - chr2L 7489796 intron Ziz - chr2L_5_7485001 chr2L_7485001 RAL-513 173 chr2L 7502733 7502770 chr2L 7502829 7502838 21 90 4.5 10.5 7.5 2.5 105 chr2L 7502733 intron RapGAP1 - chr2L 7502786 intron RapGAP1 - chr2L 7502838 intron RapGAP1 - chr2L_21_7500001 chr2L_7500001 RAL-513 174 chr2L 7555710 7555758 chr2L 7555814 7555861 16 102 5.5 4.0 4.8 2.8 151 chr2L 7555710 intron RapGAP1 - chr2L 7555786 intron RapGAP1 - chr2L 7555861 intron RapGAP1 - chr2L_16_7555001 chr2L_7555001 RAL-513 175 chr2L 7567495 7567540 chr2L 7567608 7567618 11 104 3.0 5.5 4.2 2.1 123 chr2L 7567495 intron RapGAP1 - chr2L 7567556 intron RapGAP1 - chr2L 7567618 intron RapGAP1 - chr2L_11_7565001 chr2L_7565001 RAL-513 176 chr2L 7585487 7585500 chr2L 7585606 7585616 4 118 4.5 1.5 3.0 1.0 129 chr2L 7585487 intergenic not near genes chr2L 7585552 intergenic not near genes chr2L 7585616 intergenic not near genes chr2L_4_7585001 chr2L_7585001 RAL-513 177 chr2L 7609666 7609697 chr2L 7609762 7609793 6 92 1.0 1.0 1.0 3.0 127 chr2L 7609666 intron CG6739 + chr2L 7609730 intron CG6739 + chr2L 7609793 intron CG6739 + chr2L_6_7605001 chr2L_7605001 RAL-513 178 chr2L 7636350 7636376 chr2L 7636474 7636500 6 123 1.5 2.5 2.0 2.0 150 chr2L 7636350 5` UTR CR44799 + chr2L 7636425 intron CR44799 + chr2L 7636500 5` UTR CR44799 + chr2L_6_7635001 chr2L_7635001 RAL-513 179 chr2L 7768839 7768879 chr2L 7768935 7768974 12 92 0.0 5.0 2.5 3.4 135 chr2L 7768839 intron CG7191 + chr2L 7768906 intron CG7191 + chr2L 7768974 intron CG7191 + chr2L_12_7765001 chr2L_7765001 RAL-513 180 chr2L 7839278 7839320 chr2L 7841919 7841963 4 2642 3.5 15.0 9.2 0.4 2685 chr2L 7839278 intergenic not near genes chr2L 7840620 exon CG14537 + chr2L 7841963 intergenic not near genes chr2L_4_7840001 chr2L_7840001 RAL-513 181 chr2L 7839002 7839027 chr2L 7842578 7842603 4 3578 20.5 29.0 24.8 0.2 3601 chr2L 7839002 intergenic not near genes chr2L 7840802 exon CG14537 + chr2L 7842603 intergenic not near genes chr2L_4_7840001 chr2L_7840001 RAL-513 182 chr2L 7838995 7839052 chr2L 7842604 7842628 4 3586 25.0 29.5 27.2 0.1 3633 chr2L 7838995 intergenic not near genes chr2L 7840812 exon CG14537 + chr2L 7842628 intergenic not near genes chr2L_4_7840001 chr2L_7840001 RAL-513 183 chr2L 7916146 7916193 chr2L 7916427 7916474 12 276 2.0 3.5 2.8 3.2 328 chr2L 7916146 intron Snoo - chr2L 7916310 intron Snoo - chr2L 7916474 intron Snoo - chr2L_12_7915001 chr2L_7915001 RAL-513 184 chr2L 7977084 7977101 chr2L 7984079 7984097 297 4 6995 4.5 6.0 5.2 0.6 7013 chr2L 7977084 intron Snoo - chr2L 7980590 intron Snoo - chr2L 7984097 intron,5` UTR Snoo -,CG7231 + chr2L_4_7980001 chr2L_7980001 RAL-513 185 chr2L 8013605 8013611 chr2L 8018828 8018828 copia 4 5222 5.0 0.0 2.5 1.1 5223 chr2L 8013605 intron Tg + chr2L 8016216 intron Tg + chr2L 8018828 intron Tg + chr2L_4_8015001 chr2L_8015001 RAL-513 186 chr2L 8044080 8044126 chr2L 8044177 8044205 16 94 3.0 4.0 3.5 3.6 125 chr2L 8044080 intron CG7466 + chr2L 8044142 intron CG7466 + chr2L 8044205 intron CG7466 + chr2L_16_8040001 chr2L_8040001 RAL-513 187 chr2L 8165102 8165138 chr2L 8165205 8165222 5 97 0.5 6.0 3.2 1.2 120 chr2L 8165102 intron Piezo + chr2L 8165162 intron Piezo + chr2L 8165222 intron Piezo + chr2L_5_8165001 chr2L_8165001 RAL-513 188 chr2L 8167125 8167179 chr2L 8167235 8167289 16 104 3.0 3.0 3.0 4.0 164 chr2L 8167125 intron Piezo + chr2L 8167207 intron Piezo + chr2L 8167289 intron Piezo + chr2L_16_8165001 chr2L_8165001 RAL-513 189 chr2L 8205593 8205611 chr2L 8205710 8205726 7 116 3.5 2.5 3.0 1.8 133 chr2L 8205593 3` UTR CR44120 - chr2L 8205660 intergenic CR44120 -,CR44121 -,CR44119 + chr2L 8205726 intergenic CR44121 -,CR44120 -,CR44119 +,CG8419 + chr2L_7_8205001 chr2L_8205001 RAL-513 190 chr2L 8244718 8244743 chr2L 8244855 8244882 4 140 2.0 2.5 2.2 1.2 164 chr2L 8244718 intron CG8086 - chr2L 8244800 intron CG8086 - chr2L 8244882 intron CG8086 - chr2L_4_8240001 chr2L_8240001 RAL-513 191 chr2L 8285007 8285015 chr2L 8285103 8285110 4 96 4.5 5.0 4.8 0.7 103 chr2L 8285007 intron Btk29A - chr2L 8285058 intron Btk29A - chr2L 8285110 intron Btk29A - chr2L_4_8285001 chr2L_8285001 RAL-513 192 chr2L 8287299 8287344 chr2L 8287549 8287569 13 243 2.5 4.5 3.5 2.9 270 chr2L 8287299 intron Btk29A - chr2L 8287434 intron Btk29A - chr2L 8287569 intron Btk29A - chr2L_13_8285001 chr2L_8285001 RAL-513 193 chr2L 8336932 8336967 chr2L 8337031 8337066 5 98 0.5 5.0 2.8 1.3 134 chr2L 8336932 intergenic not near genes chr2L 8336999 intergenic not near genes chr2L 8337066 intergenic not near genes chr2L_5_8335001 chr2L_8335001 RAL-513 194 chr2L 8371093 8371136 chr2L 8371265 8371275 7 162 3.0 5.5 4.2 1.3 182 chr2L 8371093 intron CG17292 + chr2L 8371184 intron CG17292 + chr2L 8371275 intron CG17292 + chr2L_7_8370001 chr2L_8370001 RAL-513 195 chr2L 8426355 8426375 chr2L 8426436 8426472 7 98 4.0 0.0 2.0 2.3 117 chr2L 8426355 intron Akap200 + chr2L 8426414 intron Akap200 + chr2L 8426472 intron Akap200 + chr2L_7_8425001 chr2L_8425001 RAL-513 196 chr2L 8452399 8452448 chr2L 8461590 8461638 roo 12 9189 4.5 4.5 4.5 2.2 9239 chr2L 8452399 intron fu12 - chr2L 8457018 intron fu12 - chr2L 8461638 intron fu12 - chr2L_12_8455001 chr2L_8455001 RAL-513 197 chr2L 8498185 8498237 chr2L 8498286 8498338 19 96 2.5 4.0 3.2 4.5 153 chr2L 8498185 intron Dh31 - chr2L 8498262 intron Dh31 - chr2L 8498338 intron Dh31 - chr2L_19_8495001 chr2L_8495001 RAL-513 198 chr2L 8508970 8509005 chr2L 8509092 8509126 14 118 0.0 1.0 0.5 9.3 156 chr2L 8508970 intergenic CG13096 - chr2L 8509048 intergenic CG13096 - chr2L 8509126 3` UTR CG13096 - chr2L_14_8505001 chr2L_8505001 RAL-513 199 chr2L 8562564 8562602 chr2L 8562833 8562853 10 261 5.5 4.0 4.8 1.7 289 chr2L 8562564 intron Sema-1a + chr2L 8562708 intron Sema-1a + chr2L 8562853 intron Sema-1a + chr2L_10_8560001 chr2L_8560001 RAL-513 200 chr2L 8587284 8587299 chr2L 8587383 8587395 8 97 8.0 8.0 8.0 0.9 111 chr2L 8587284 intron Sema-1a + chr2L 8587340 intron Sema-1a + chr2L 8587395 intron Sema-1a + chr2L_8_8585001 chr2L_8585001 RAL-513 201 chr2L 8594456 8594493 chr2L 8601527 8601566 297 8 7069 2.5 3.5 3.0 2.0 7110 chr2L 8594456 intron,3` UTR Sema-1a +,CR43855 - chr2L 8598011 intron Sema-1a + chr2L 8601566 intron Sema-1a + chr2L_8_8595001 chr2L_8595001 RAL-513 202 chr2L 8719192 8719235 chr2L 8719287 8719301 15 87 5.5 2.0 3.8 3.1 109 chr2L 8719192 intron raw - chr2L 8719246 intron raw - chr2L 8719301 intron raw - chr2L_15_8715001 chr2L_8715001 RAL-513 203 chr2L 8723098 8723148 chr2L 8731494 8731529 Tirant 17 8393 2.0 4.5 3.2 4.0 8431 chr2L 8723098 intron raw - chr2L 8727314 intron raw - chr2L 8731529 intron raw - chr2L_17_8725001 chr2L_8725001 RAL-513 204 chr2L 8742928 8742936 chr2L 8743026 8743034 4 97 0.0 4.5 2.2 1.2 106 chr2L 8742928 intergenic not near genes chr2L 8742981 intergenic not near genes chr2L 8743034 intergenic not near genes chr2L_4_8740001 chr2L_8740001 RAL-513 205 chr2L 8786539 8786567 chr2L 8786646 8786661 9 106 1.5 5.5 3.5 2.0 122 chr2L 8786539 intergenic not near genes chr2L 8786600 intergenic not near genes chr2L 8786661 intergenic not near genes chr2L_9_8785001 chr2L_8785001 RAL-513 206 chr2L 8788749 8788789 chr2L 8788845 8788900 8 109 1.5 1.0 1.2 3.6 151 chr2L 8788749 intergenic not near genes chr2L 8788824 intergenic not near genes chr2L 8788900 intergenic not near genes chr2L_8_8785001 chr2L_8785001 RAL-513 207 chr2L 8799784 8799828 chr2L 8799916 8799945 11 129 6.0 3.5 4.8 1.9 161 chr2L 8799784 intergenic not near genes chr2L 8799864 intergenic not near genes chr2L 8799945 intergenic not near genes chr2L_11_8795001 chr2L_8795001 RAL-513 208 chr2L 8818044 8818073 chr2L 8818124 8818173 7 94 3.5 4.5 4.0 1.4 129 chr2L 8818044 intergenic not near genes chr2L 8818108 intergenic not near genes chr2L 8818173 intergenic not near genes chr2L_7_8815001 chr2L_8815001 RAL-513 209 chr2L 8976205 8976254 chr2L 8976315 8976346 7 103 0.5 2.5 1.5 2.8 141 chr2L 8976205 intergenic not near genes chr2L 8976276 intergenic not near genes chr2L 8976346 intergenic not near genes chr2L_7_8975001 chr2L_8975001 RAL-513 210 chr2L 8985649 8985675 chr2L 8985824 8985850 4 175 2.5 0.5 1.5 1.6 201 chr2L 8985649 intergenic rost - chr2L 8985750 intergenic rost - chr2L 8985850 intergenic rost - chr2L_4_8985001 chr2L_8985001 RAL-513 211 chr2L 8987974 8988006 chr2L 8988075 8988102 7 99 2.5 1.5 2.0 2.3 128 chr2L 8987974 intron rost - chr2L 8988038 intron rost - chr2L 8988102 intron rost - chr2L_7_8985001 chr2L_8985001 RAL-513 212 chr2L 8997259 8997294 chr2L 8997603 8997658 17 351 28.5 32.5 30.5 0.5 399 chr2L 8997259 exon alien - chr2L 8997458 intergenic alien -,CG18661 + chr2L 8997658 5` UTR CG18661 + chr2L_17_8995001 chr2L_8995001 RAL-513 213 chr2L 9000270 9000311 chr2L 9007800 9007825 roo 10 7525 8.5 8.0 8.2 1.1 7555 chr2L 9000270 intergenic Try29F + chr2L 9004048 intergenic not near genes chr2L 9007825 intergenic not near genes chr2L_10_9000001 chr2L_9000001 RAL-513 214 chr2L 9084336 9084340 chr2L 16217660 16217660 4 7133322 26.0 24.0 25.0 0.2 7133324 chr2L 9084336 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_4_12650001 chr2L_12650001 RAL-513 215 chr2L 9202051 9202083 chr2L 9202131 9202135 8 72 5.5 6.5 6.0 1.1 84 chr2L 9202051 intron tai + chr2L 9202093 intron tai + chr2L 9202135 intron tai + chr2L_8_9200001 chr2L_9200001 RAL-513 216 chr2L 9217953 9218001 chr2L 9222759 9222788 Doc 21 4798 5.0 7.5 6.2 2.9 4835 chr2L 9217953 intron tai + chr2L 9220370 intron tai + chr2L 9222788 intron tai + chr2L_21_9220001 chr2L_9220001 RAL-513 217 chr2L 9225835 9225866 chr2L 9225945 9225976 9 109 3.5 4.0 3.8 1.9 141 chr2L 9225835 intron tai + chr2L 9225906 intron tai + chr2L 9225976 intron tai + chr2L_9_9225001 chr2L_9225001 RAL-513 218 chr2L 9262115 9262142 chr2L 9262240 9262241 6 121 2.0 8.0 5.0 1.0 126 chr2L 9262115 intron,3` UTR Ggamma30A +,CR45262 - chr2L 9262178 intron,3` UTR Ggamma30A +,CR45262 - chr2L 9262241 intron,3` UTR Ggamma30A +,CR45262 - chr2L_6_9260001 chr2L_9260001 RAL-513 219 chr2L 9285115 9285154 chr2L 9285221 9285261 4 98 6.5 3.0 4.8 0.7 146 chr2L 9285115 intron Ggamma30A + chr2L 9285188 intron Ggamma30A + chr2L 9285261 intron Ggamma30A + chr2L_4_9285001 chr2L_9285001 RAL-513 220 chr2L 9297367 9297405 chr2L 9297455 9297501 15 91 3.0 5.0 4.0 3.0 134 chr2L 9297367 3` UTR Ggamma30A + chr2L 9297434 3` UTR Ggamma30A + chr2L 9297501 3` UTR Ggamma30A + chr2L_15_9295001 chr2L_9295001 RAL-513 221 chr2L 9300686 9300700 chr2L 9300788 9300796 4 101 0.5 0.0 0.2 3.3 110 chr2L 9300686 3` UTR Ggamma30A + chr2L 9300741 3` UTR Ggamma30A + chr2L 9300796 3` UTR Ggamma30A + chr2L_4_9300001 chr2L_9300001 RAL-513 222 chr2L 9364279 9364332 chr2L 9364398 9364424 5 113 0.0 4.0 2.0 1.7 145 chr2L 9364279 intergenic CR43404 + chr2L 9364352 5` UTR CR43404 + chr2L 9364424 intron CR43404 + chr2L_5_9360001 chr2L_9360001 RAL-513 223 chr2L 9385100 9385140 chr2L 9385210 9385247 19 107 8.0 4.0 6.0 2.7 147 chr2L 9385100 intron Shawl - chr2L 9385174 intron Shawl - chr2L 9385247 intron Shawl - chr2L_19_9385001 chr2L_9385001 RAL-513 224 chr2L 9387252 9387277 chr2L 9387370 9387395 6 116 2.0 0.5 1.2 2.7 143 chr2L 9387252 intron Shawl - chr2L 9387324 intron Shawl - chr2L 9387395 intron,5` UTR Shawl -,Aldh + chr2L_6_9385001 chr2L_9385001 RAL-513 225 chr2L 9407890 9407895 chr2L 9407992 9407995 4 101 8.0 1.5 4.8 0.7 105 chr2L 9407890 intron Shawl - chr2L 9407942 intron Shawl - chr2L 9407995 intron Shawl - chr2L_4_9405001 chr2L_9405001 RAL-513 226 chr2L 9415798 9415816 chr2L 9415895 9415898 8 93 0.5 4.5 2.5 2.3 100 chr2L 9415798 intergenic not near genes chr2L 9415848 intergenic not near genes chr2L 9415898 intergenic not near genes chr2L_8_9415001 chr2L_9415001 RAL-513 227 chr2L 9415822 9415831 chr2L 9415888 9415927 4 79 0.5 2.5 1.5 1.6 105 chr2L 9415822 intergenic not near genes chr2L 9415874 intergenic not near genes chr2L 9415927 intergenic not near genes chr2L_4_9415001 chr2L_9415001 RAL-513 228 chr2L 9454968 9455004 chr2L 9455082 9455125 12 117 1.5 0.0 0.8 6.7 157 chr2L 9454968 intron numb + chr2L 9455046 intron numb + chr2L 9455125 intron numb + chr2L_12_9455001 chr2L_9455001 RAL-513 229 chr2L 9456917 9456955 chr2L 9457018 9457024 10 92 2.0 3.5 2.8 2.6 107 chr2L 9456917 intron numb + chr2L 9456970 intron numb + chr2L 9457024 intron numb + chr2L_10_9455001 chr2L_9455001 RAL-513 230 chr2L 9464826 9464878 chr2L 9464937 9464990 6 105 4.0 2.0 3.0 1.5 164 chr2L 9464826 intergenic not near genes chr2L 9464908 intergenic not near genes chr2L 9464990 intergenic not near genes chr2L_6_9460001 chr2L_9460001 RAL-513 231 chr2L 9474762 9474810 chr2L 9474876 9474922 8 106 1.0 1.5 1.2 3.6 160 chr2L 9474762 intergenic not near genes chr2L 9474842 intergenic not near genes chr2L 9474922 intergenic not near genes chr2L_8_9470001 chr2L_9470001 RAL-513 232 chr2L 9543753 9543766 chr2L 9543850 9543863 5 97 0.5 1.5 1.0 2.5 110 chr2L 9543753 intergenic Cpr30B +,CG13113 + chr2L 9543808 intergenic Cpr30B +,CG13113 + chr2L 9543863 intergenic Cpr30B +,CG13113 + chr2L_5_9540001 chr2L_9540001 RAL-513 233 chr2L 9619491 9619520 chr2L 9619835 9619877 4 350 0.5 2.5 1.5 1.6 386 chr2L 9619491 intron GlcAT-S + chr2L 9619684 intron GlcAT-S + chr2L 9619877 intron GlcAT-S + chr2L_4_9615001 chr2L_9615001 RAL-513 234 chr2L 9665839 9665931 chr2L 9665918 9666033 11 99 0.0 0.0 0.0 11.0 194 chr2L 9665839 intergenic not near genes chr2L 9665936 intergenic not near genes chr2L 9666033 intergenic not near genes chr2L_11_9665001 chr2L_9665001 RAL-513 235 chr2L 9672589 9672636 chr2L 9672691 9672743 10 104 5.0 3.5 4.2 1.9 154 chr2L 9672589 intergenic not near genes chr2L 9672666 intergenic not near genes chr2L 9672743 intergenic not near genes chr2L_10_9670001 chr2L_9670001 RAL-513 236 chr2L 9730957 9730973 chr2L 9731060 9731076 9 102 5.5 6.5 6.0 1.3 119 chr2L 9730957 intron Nckx30C - chr2L 9731016 intron Nckx30C - chr2L 9731076 intron Nckx30C - chr2L_9_9730001 chr2L_9730001 RAL-513 237 chr2L 9730983 9731004 chr2L 9731057 9731072 7 86 3.0 6.0 4.5 1.3 89 chr2L 9730983 intron Nckx30C - chr2L 9731028 intron Nckx30C - chr2L 9731072 intron Nckx30C - chr2L_7_9730001 chr2L_9730001 RAL-513 238 chr2L 9770758 9770762 chr2L 9770877 9770887 1360 5 124 2.5 6.5 4.5 0.9 129 chr2L 9770758 intron ppk18 - chr2L 9770822 intron ppk18 - chr2L 9770887 exon ppk18 - chr2L_5_9770001 chr2L_9770001 RAL-513 239 chr2L 9837424 9837444 chr2L 9837513 9837525 6 88 3.5 3.5 3.5 1.3 101 chr2L 9837424 intron nAChRalpha6 - chr2L 9837474 intron nAChRalpha6 - chr2L 9837525 intron nAChRalpha6 - chr2L_6_9835001 chr2L_9835001 RAL-513 240 chr2L 9871506 9871532 chr2L 9871609 9871636 5 102 3.0 2.5 2.8 1.3 130 chr2L 9871506 intron nAChRalpha6 - chr2L 9871571 intron nAChRalpha6 - chr2L 9871636 intron nAChRalpha6 - chr2L_5_9870001 chr2L_9870001 RAL-513 241 chr2L 9873412 9873450 chr2L 9873966 9874005 7 553 4.0 3.5 3.8 1.5 593 chr2L 9873412 intron nAChRalpha6 - chr2L 9873708 intron nAChRalpha6 - chr2L 9874005 intron nAChRalpha6 - chr2L_7_9870001 chr2L_9870001 RAL-513 242 chr2L 9943361 9943379 chr2L 9943439 9943448 8 84 1.5 5.0 3.2 1.9 87 chr2L 9943361 intron CG5853 - chr2L 9943404 intron CG5853 - chr2L 9943448 intron CG5853 - chr2L_8_9940001 chr2L_9940001 RAL-513 243 chr2L 9973721 9973736 chr2L 9980850 9980862 HMS-Beagle 7 7135 10.5 5.5 8.0 0.8 7141 chr2L 9973721 intergenic not near genes chr2L 9977292 intergenic not near genes chr2L 9980862 intergenic not near genes chr2L_7_9975001 chr2L_9975001 RAL-513 244 chr2L 9973737 9973759 chr2L 9980845 9980898 HMS-Beagle 11 7125 5.0 5.0 5.0 1.8 7161 chr2L 9973737 intergenic not near genes chr2L 9977318 intergenic not near genes chr2L 9980898 intergenic not near genes chr2L_11_9975001 chr2L_9975001 RAL-513 245 chr2L 9986353 9986384 chr2L 9986446 9986494 5 97 4.0 4.5 4.2 1.0 141 chr2L 9986353 intron bib + chr2L 9986424 intron bib + chr2L 9986494 intron bib + chr2L_5_9985001 chr2L_9985001 RAL-513 246 chr2L 10153199 10153229 chr2L 10153284 10153328 9 82 2.5 6.0 4.2 1.7 129 chr2L 10153199 intron,exon CG44153 -,CG4839 + chr2L 10153264 intron,intron CG44153 -,CG4839 + chr2L 10153328 intron,exon CG44153 -,CG4839 + chr2L_9_10150001 chr2L_10150001 RAL-513 247 chr2L 10156307 10156351 chr2L 10163796 10163809 blood 10 7485 4.0 4.5 4.2 1.9 7502 chr2L 10156307 intron,3` UTR CG44153 -,CG4839 + chr2L 10160058 intron CG44153 - chr2L 10163809 intron CG44153 - chr2L_10_10160001 chr2L_10160001 RAL-513 248 chr2L 10176023 10176024 chr2L 16071771 16071771 5 5895747 24.5 11.5 18.0 0.3 5895748 chr2L 10176023 intron CG44153 - chr2L 13123897 intergenic not near genes chr2L 16071771 intron beat-Ia + chr2L_5_13120001 chr2L_13120001 RAL-513 249 chr2L 10294654 10294679 chr2L 10294760 10294784 5 106 7.0 4.0 5.5 0.8 130 chr2L 10294654 intron Hand - chr2L 10294719 intron Hand - chr2L 10294784 intron Hand - chr2L_5_10290001 chr2L_10290001 RAL-513 250 chr2L 10395506 10395551 chr2L 10395611 10395656 8 105 2.5 2.0 2.2 2.5 150 chr2L 10395506 intron Mdh1 - chr2L 10395581 intron Mdh1 - chr2L 10395656 intron Mdh1 - chr2L_8_10395001 chr2L_10395001 RAL-513 251 chr2L 10458195 10458215 chr2L 10458310 10458330 5 112 0.5 1.0 0.8 2.8 135 chr2L 10458195 intron LM408 + chr2L 10458262 intron LM408 + chr2L 10458330 intron LM408 + chr2L_5_10455001 chr2L_10455001 RAL-513 252 chr2L 10490272 10490296 chr2L 10490359 10490395 8 96 4.5 3.5 4.0 1.6 123 chr2L 10490272 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490334 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490395 3` UTR,3` UTR CG6144 +,CG13144 - chr2L_8_10490001 chr2L_10490001 RAL-513 253 chr2L 10515347 10515385 chr2L 10515460 10515495 5 112 1.5 2.5 2.0 1.7 148 chr2L 10515347 intron,intron CG45083 -,Fatp - chr2L 10515421 intron,intron CG45083 -,Fatp - chr2L 10515495 intron,intron CG45083 -,Fatp - chr2L_5_10515001 chr2L_10515001 RAL-513 254 chr2L 10563909 10563933 chr2L 10564021 10564045 4 111 4.0 6.5 5.2 0.6 136 chr2L 10563909 intron Trim9 + chr2L 10563977 intron Trim9 + chr2L 10564045 intron Trim9 + chr2L_4_10560001 chr2L_10560001 RAL-513 255 chr2L 10563936 10563937 chr2L 10564010 10564042 4 94 4.0 5.5 4.8 0.7 106 chr2L 10563936 intron Trim9 + chr2L 10563989 intron Trim9 + chr2L 10564042 intron Trim9 + chr2L_4_10560001 chr2L_10560001 RAL-513 256 chr2L 10572682 10572726 chr2L 10572782 10572826 10 98 6.0 4.0 5.0 1.7 144 chr2L 10572682 intron Trim9 + chr2L 10572754 intron Trim9 + chr2L 10572826 intron Trim9 + chr2L_10_10570001 chr2L_10570001 RAL-513 257 chr2L 10580779 10580812 chr2L 10580875 10580913 13 95 5.5 3.5 4.5 2.4 134 chr2L 10580779 intron Trim9 + chr2L 10580846 intron Trim9 + chr2L 10580913 intron Trim9 + chr2L_13_10580001 chr2L_10580001 RAL-513 258 chr2L 10592822 10592863 chr2L 10600502 10600545 opus 9 7681 1.5 6.5 4.0 1.8 7723 chr2L 10592822 intron Trim9 + chr2L 10596684 intron Trim9 + chr2L 10600545 intron Trim9 + chr2L_9_10595001 chr2L_10595001 RAL-513 259 chr2L 10604175 10604220 chr2L 10604279 10604321 5 102 3.5 0.5 2.0 1.7 146 chr2L 10604175 intron Trim9 + chr2L 10604248 intron Trim9 + chr2L 10604321 intron Trim9 + chr2L_5_10600001 chr2L_10600001 RAL-513 260 chr2L 10653245 10653293 chr2L 10653360 10653409 14 115 3.0 3.5 3.2 3.3 164 chr2L 10653245 exon CG17098 + chr2L 10653327 intron CG17098 + chr2L 10653409 intron CG17098 + chr2L_14_10650001 chr2L_10650001 RAL-513 261 chr2L 10689965 10689986 chr2L 10690082 10690101 5 114 6.5 6.0 6.2 0.7 136 chr2L 10689965 intergenic not near genes chr2L 10690033 intergenic not near genes chr2L 10690101 intergenic not near genes chr2L_5_10690001 chr2L_10690001 RAL-513 262 chr2L 10689987 10690016 chr2L 10690081 10690133 7 104 4.0 5.5 4.8 1.2 146 chr2L 10689987 intergenic not near genes chr2L 10690060 intergenic not near genes chr2L 10690133 intergenic not near genes chr2L_7_10690001 chr2L_10690001 RAL-513 263 chr2L 10793299 10793349 chr2L 10793395 10793443 12 94 4.5 2.5 3.5 2.7 144 chr2L 10793299 intron CG31869 - chr2L 10793371 intron CG31869 - chr2L 10793443 intron CG31869 - chr2L_12_10790001 chr2L_10790001 RAL-513 264 chr2L 10793769 10793785 chr2L 10793878 10793906 6 116 3.0 6.0 4.5 1.1 137 chr2L 10793769 intron CG31869 - chr2L 10793838 intron CG31869 - chr2L 10793906 intron CG31869 - chr2L_6_10790001 chr2L_10790001 RAL-513 265 chr2L 10812038 10812063 chr2L 10812152 10812156 8 110 3.0 3.0 3.0 2.0 118 chr2L 10812038 intron Nos - chr2L 10812097 intron Nos - chr2L 10812156 intron Nos - chr2L_8_10810001 chr2L_10810001 RAL-513 266 chr2L 10826154 10826203 chr2L 10826269 10826285 14 111 4.0 7.0 5.5 2.2 131 chr2L 10826154 intron Nos - chr2L 10826220 intron Nos - chr2L 10826285 intron Nos - chr2L_14_10825001 chr2L_10825001 RAL-513 267 chr2L 10862833 10862872 chr2L 10864465 10864506 Rt1c 11 1625 4.0 6.0 5.0 1.8 1673 chr2L 10862833 3` UTR CR43807 - chr2L 10863670 intron CR43807 - chr2L 10864506 3` UTR CR43807 - chr2L_11_10860001 chr2L_10860001 RAL-513 268 chr2L 10905585 10905627 chr2L 10905692 10905734 5 107 0.5 2.0 1.2 2.3 149 chr2L 10905585 intergenic not near genes chr2L 10905660 intergenic not near genes chr2L 10905734 intergenic not near genes chr2L_5_10905001 chr2L_10905001 RAL-513 269 chr2L 10945062 10945093 chr2L 10945332 10945351 7 274 3.0 4.0 3.5 1.6 289 chr2L 10945062 intron dpr2 - chr2L 10945206 intron dpr2 - chr2L 10945351 intron dpr2 - chr2L_7_10945001 chr2L_10945001 RAL-513 270 chr2L 10946959 10946976 chr2L 10956157 10956202 roo 11 9218 3.5 5.0 4.2 2.1 9243 chr2L 10946959 intron dpr2 - chr2L 10951580 intron dpr2 - chr2L 10956202 intron dpr2 - chr2L_11_10950001 chr2L_10950001 RAL-513 271 chr2L 11055027 11055069 chr2L 11055132 11055167 10 101 3.5 3.0 3.2 2.4 140 chr2L 11055027 intron Samuel - chr2L 11055097 intron Samuel - chr2L 11055167 intron Samuel - chr2L_10_11055001 chr2L_11055001 RAL-513 272 chr2L 11056556 11056579 chr2L 11056657 11056681 5 102 4.0 0.0 2.0 1.7 125 chr2L 11056556 intron Samuel - chr2L 11056618 intron Samuel - chr2L 11056681 intron Samuel - chr2L_5_11055001 chr2L_11055001 RAL-513 273 chr2L 11056581 11056595 chr2L 11056652 11056688 4 92 2.5 0.0 1.2 1.8 107 chr2L 11056581 intron Samuel - chr2L 11056634 intron Samuel - chr2L 11056688 intron Samuel - chr2L_4_11055001 chr2L_11055001 RAL-513 274 chr2L 11169463 11169489 chr2L 11169618 11169642 5 151 4.0 1.5 2.8 1.3 179 chr2L 11169463 intron Ca-beta - chr2L 11169552 intron Ca-beta - chr2L 11169642 intron Ca-beta - chr2L_5_11165001 chr2L_11165001 RAL-513 275 chr2L 11292368 11292399 chr2L 11292465 11292500 6 100 7.0 3.5 5.2 1.0 132 chr2L 11292368 intergenic not near genes chr2L 11292434 intergenic not near genes chr2L 11292500 intergenic not near genes chr2L_6_11290001 chr2L_11290001 RAL-513 276 chr2L 11357966 11358003 chr2L 11358064 11358099 6 98 1.5 0.5 1.0 3.0 133 chr2L 11357966 intergenic not near genes chr2L 11358032 intergenic not near genes chr2L 11358099 intergenic not near genes chr2L_6_11355001 chr2L_11355001 RAL-513 277 chr2L 11379932 11379981 chr2L 11380033 11380083 6 99 2.5 0.0 1.2 2.7 151 chr2L 11379932 intergenic not near genes chr2L 11380008 intergenic not near genes chr2L 11380083 intergenic not near genes chr2L_6_11380001 chr2L_11380001 RAL-513 278 chr2L 11380612 11380635 chr2L 11380693 11380727 5 80 2.5 3.0 2.8 1.3 115 chr2L 11380612 intergenic not near genes chr2L 11380670 intergenic not near genes chr2L 11380727 intergenic not near genes chr2L_5_11380001 chr2L_11380001 RAL-513 279 chr2L 11395037 11395049 chr2L 11395138 11395143 5 100 1.5 1.0 1.2 2.3 106 chr2L 11395037 intergenic not near genes chr2L 11395090 intergenic not near genes chr2L 11395143 intergenic not near genes chr2L_5_11395001 chr2L_11395001 RAL-513 280 chr2L 11404770 11404797 chr2L 11404865 11404893 10 95 0.5 3.5 2.0 3.3 123 chr2L 11404770 intergenic not near genes chr2L 11404832 intergenic not near genes chr2L 11404893 intergenic not near genes chr2L_10_11400001 chr2L_11400001 RAL-513 281 chr2L 11418637 11418688 chr2L 11418736 11418784 9 93 2.5 4.0 3.2 2.1 147 chr2L 11418637 intergenic not near genes chr2L 11418710 intergenic not near genes chr2L 11418784 intergenic not near genes chr2L_9_11415001 chr2L_11415001 RAL-513 282 chr2L 11563623 11563648 chr2L 11568847 11568866 copia 7 5222 5.0 3.5 4.2 1.3 5243 chr2L 11563623 intergenic not near genes chr2L 11566244 intergenic not near genes chr2L 11568866 intergenic not near genes chr2L_7_11565001 chr2L_11565001 RAL-513 283 chr2L 11563649 11563669 chr2L 11568843 11568879 copia 4 5212 3.0 2.5 2.8 1.1 5230 chr2L 11563649 intergenic not near genes chr2L 11566264 intergenic not near genes chr2L 11568879 intergenic not near genes chr2L_4_11565001 chr2L_11565001 RAL-513 284 chr2L 11614074 11614083 chr2L 11615552 11615583 hopper2 6 1493 4.5 4.0 4.2 1.2 1509 chr2L 11614074 intron kek2 + chr2L 11614828 intron kek2 + chr2L 11615583 intron kek2 + chr2L_6_11610001 chr2L_11610001 RAL-513 285 chr2L 11672119 11672144 chr2L 11672246 11672271 6 127 3.0 2.5 2.8 1.6 152 chr2L 11672119 intergenic not near genes chr2L 11672195 intergenic not near genes chr2L 11672271 intergenic not near genes chr2L_6_11670001 chr2L_11670001 RAL-513 286 chr2L 11685414 11685461 chr2L 11685543 11685577 10 125 4.0 2.5 3.2 2.4 163 chr2L 11685414 intergenic not near genes chr2L 11685496 intergenic not near genes chr2L 11685577 intergenic not near genes chr2L_10_11685001 chr2L_11685001 RAL-513 287 chr2L 11713492 11713505 chr2L 11720979 11720979 blood 4 7484 7.0 5.5 6.2 0.6 7487 chr2L 11713492 intergenic not near genes chr2L 11717236 intergenic not near genes chr2L 11720979 intergenic CR44143 + chr2L_4_11715001 chr2L_11715001 RAL-513 288 chr2L 11713510 11713539 chr2L 11720974 11721026 blood 10 7474 2.0 5.5 3.8 2.1 7516 chr2L 11713510 intergenic not near genes chr2L 11717268 intergenic not near genes chr2L 11721026 intergenic CR44143 + chr2L_10_11715001 chr2L_11715001 RAL-513 289 chr2L 11747551 11747603 chr2L 11747935 11747983 11 380 1.5 3.0 2.2 3.4 432 chr2L 11747551 intergenic not near genes chr2L 11747767 intergenic not near genes chr2L 11747983 intergenic not near genes chr2L_11_11745001 chr2L_11745001 RAL-513 290 chr2L 11770582 11770631 chr2L 11770684 11770736 20 102 3.0 1.5 2.2 6.2 154 chr2L 11770582 intergenic not near genes chr2L 11770659 intergenic not near genes chr2L 11770736 intergenic not near genes chr2L_20_11770001 chr2L_11770001 RAL-513 291 chr2L 11787096 11787115 chr2L 11787196 11787221 5 104 6.0 5.5 5.8 0.7 125 chr2L 11787096 intergenic not near genes chr2L 11787158 intergenic not near genes chr2L 11787221 intergenic not near genes chr2L_5_11785001 chr2L_11785001 RAL-513 292 chr2L 11828426 11828465 chr2L 11828522 11828561 12 95 3.0 6.0 4.5 2.2 135 chr2L 11828426 intron,intron Pde1c -,esc - chr2L 11828494 intron,intron Pde1c -,esc - chr2L 11828561 intron,intron Pde1c -,esc - chr2L_12_11825001 chr2L_11825001 RAL-513 293 chr2L 11841328 11841371 chr2L 11841445 11841498 7 113 3.5 0.0 1.8 2.5 170 chr2L 11841328 intron Pde1c - chr2L 11841413 intron Pde1c - chr2L 11841498 intron Pde1c - chr2L_7_11840001 chr2L_11840001 RAL-513 294 chr2L 11862339 11862367 chr2L 11862452 11862480 10 113 7.0 6.0 6.5 1.3 141 chr2L 11862339 intron Pde1c - chr2L 11862410 intron Pde1c - chr2L 11862480 intron Pde1c - chr2L_10_11860001 chr2L_11860001 RAL-513 295 chr2L 12031374 12031419 chr2L 12031468 12031520 8 98 0.5 3.0 1.8 2.9 146 chr2L 12031374 intron dmGlut + chr2L 12031447 intron dmGlut + chr2L 12031520 intron dmGlut + chr2L_8_12030001 chr2L_12030001 RAL-513 296 chr2L 12067342 12067356 chr2L 12074388 12074428 297 5 7060 3.0 4.5 3.8 1.0 7086 chr2L 12067342 intergenic not near genes chr2L 12070885 intergenic not near genes chr2L 12074428 intergenic not near genes chr2L_5_12070001 chr2L_12070001 RAL-513 297 chr2L 12131450 12131497 chr2L 12131566 12131578 12 112 3.0 2.0 2.5 3.4 128 chr2L 12131450 intron rho-6 - chr2L 12131514 intron rho-6 - chr2L 12131578 intron rho-6 - chr2L_12_12130001 chr2L_12130001 RAL-513 298 chr2L 12132714 12132749 chr2L 12132817 12132823 7 95 0.5 0.5 0.5 4.7 109 chr2L 12132714 intron rho-6 - chr2L 12132768 intron rho-6 - chr2L 12132823 intron rho-6 - chr2L_7_12130001 chr2L_12130001 RAL-513 299 chr2L 12157590 12157624 chr2L 12157689 12157689 10 86 8.0 1.5 4.8 1.7 99 chr2L 12157590 intron CG31760 + chr2L 12157640 intron CG31760 + chr2L 12157689 intron CG31760 + chr2L_10_12155001 chr2L_12155001 RAL-513 300 chr2L 12158532 12158542 chr2L 12158709 12158754 9 201 5.0 2.0 3.5 2.0 222 chr2L 12158532 intron CG31760 + chr2L 12158643 intron CG31760 + chr2L 12158754 intron CG31760 + chr2L_9_12155001 chr2L_12155001 RAL-513 301 chr2L 12254014 12254034 chr2L 12254126 12254146 12 112 6.5 0.5 3.5 2.7 132 chr2L 12254014 intron aret + chr2L 12254080 intron aret + chr2L 12254146 intron aret + chr2L_12_12250001 chr2L_12250001 RAL-513 302 chr2L 12272419 12272467 chr2L 12272526 12272574 8 102 2.5 3.5 3.0 2.0 155 chr2L 12272419 intron aret + chr2L 12272496 intron aret + chr2L 12272574 intron aret + chr2L_8_12270001 chr2L_12270001 RAL-513 303 chr2L 12305389 12305437 chr2L 12305497 12305525 8 105 5.0 3.0 4.0 1.6 136 chr2L 12305389 intron aret + chr2L 12305457 intron aret + chr2L 12305525 intron aret + chr2L_8_12305001 chr2L_12305001 RAL-513 304 chr2L 12366844 12366888 chr2L 12366950 12366994 5 106 0.5 5.5 3.0 1.2 150 chr2L 12366844 intron bru-2 + chr2L 12366919 intron bru-2 + chr2L 12366994 intron bru-2 + chr2L_5_12365001 chr2L_12365001 RAL-513 305 chr2L 12444810 12444815 chr2L 12444878 12444916 4 92 1.5 5.0 3.2 1.0 106 chr2L 12444810 intron Oatp33Ea - chr2L 12444863 intron Oatp33Ea - chr2L 12444916 intron Oatp33Ea - chr2L_4_12440001 chr2L_12440001 RAL-513 306 chr2L 12487869 12487893 chr2L 12487970 12487982 5 98 9.0 7.0 8.0 0.6 113 chr2L 12487869 intron bun - chr2L 12487926 intron bun - chr2L 12487982 intron bun - chr2L_5_12485001 chr2L_12485001 RAL-513 307 chr2L 12487895 12487919 chr2L 12487967 12487978 9 91 3.5 6.5 5.0 1.5 83 chr2L 12487895 intron bun - chr2L 12487936 intron bun - chr2L 12487978 intron bun - chr2L_9_12485001 chr2L_12485001 RAL-513 308 chr2L 12529231 12529241 chr2L 12529388 12529413 5 168 5.0 3.5 4.2 1.0 182 chr2L 12529231 intron bun - chr2L 12529322 intron bun - chr2L 12529413 intron bun - chr2L_5_12525001 chr2L_12525001 RAL-513 309 chr2L 12638759 12638791 chr2L 12638882 12638914 7 118 3.5 2.5 3.0 1.8 155 chr2L 12638759 intron Ref2 - chr2L 12638836 intron Ref2 - chr2L 12638914 intron Ref2 - chr2L_7_12635001 chr2L_12635001 RAL-513 310 chr2L 12731053 12731092 chr2L 12735824 12735851 F-element 11 4781 2.5 3.0 2.8 2.9 4798 chr2L 12731053 intron MRP + chr2L 12733452 intron MRP + chr2L 12735851 intron MRP + chr2L_11_12730001 chr2L_12730001 RAL-513 311 chr2L 12739157 12739198 chr2L 12743957 12743998 Doc 11 4800 3.0 7.0 5.0 1.8 4841 chr2L 12739157 exon MRP + chr2L 12741578 intron MRP + chr2L 12743998 exon MRP + chr2L_11_12740001 chr2L_12740001 RAL-513 312 chr2L 12751289 12751340 chr2L 12751392 12751442 7 98 3.0 3.5 3.2 1.7 153 chr2L 12751289 intergenic not near genes chr2L 12751366 intergenic not near genes chr2L 12751442 intergenic not near genes chr2L_7_12750001 chr2L_12750001 RAL-513 313 chr2L 12759189 12759238 chr2L 12759301 12759345 13 106 1.0 3.0 2.0 4.3 156 chr2L 12759189 intergenic not near genes chr2L 12759267 intergenic not near genes chr2L 12759345 intergenic not near genes chr2L_13_12755001 chr2L_12755001 RAL-513 314 chr2L 12791603 12791622 chr2L 12795298 12795316 F-element 4 3694 5.5 7.0 6.2 0.6 3713 chr2L 12791603 intergenic not near genes chr2L 12793460 intergenic not near genes chr2L 12795316 intergenic not near genes chr2L_4_12790001 chr2L_12790001 RAL-513 315 chr2L 12791624 12791638 chr2L 12795278 12795303 F-element 6 3668 5.0 4.5 4.8 1.0 3679 chr2L 12791624 intergenic not near genes chr2L 12793464 intergenic not near genes chr2L 12795303 intergenic not near genes chr2L_6_12790001 chr2L_12790001 RAL-513 316 chr2L 12835536 12835576 chr2L 12835665 12835705 7 128 2.5 1.0 1.8 2.5 169 chr2L 12835536 intergenic not near genes chr2L 12835620 intergenic not near genes chr2L 12835705 intergenic not near genes chr2L_7_12835001 chr2L_12835001 RAL-513 317 chr2L 12861696 12861729 chr2L 12863163 12863214 hobo 6 1480 2.0 1.5 1.8 2.1 1518 chr2L 12861696 intergenic not near genes chr2L 12862455 intergenic not near genes chr2L 12863214 intergenic not near genes chr2L_6_12860001 chr2L_12860001 RAL-513 318 chr2L 12891918 12891963 chr2L 12892015 12892039 8 94 1.5 5.5 3.5 1.8 121 chr2L 12891918 intergenic not near genes chr2L 12891978 intergenic not near genes chr2L 12892039 intergenic not near genes chr2L_8_12890001 chr2L_12890001 RAL-513 319 chr2L 12894012 12894053 chr2L 12895491 12895501 hobo 8 1474 4.0 6.0 5.0 1.3 1489 chr2L 12894012 intergenic not near genes chr2L 12894756 intergenic not near genes chr2L 12895501 intergenic not near genes chr2L_8_12890001 chr2L_12890001 RAL-513 320 chr2L 12905459 12905475 chr2L 12905563 12905579 6 102 6.0 3.0 4.5 1.1 120 chr2L 12905459 intergenic not near genes chr2L 12905519 intergenic not near genes chr2L 12905579 intergenic not near genes chr2L_6_12905001 chr2L_12905001 RAL-513 321 chr2L 12905489 12905509 chr2L 12905560 12905598 6 92 2.0 2.0 2.0 2.0 109 chr2L 12905489 intergenic not near genes chr2L 12905544 intergenic not near genes chr2L 12905598 intergenic not near genes chr2L_6_12905001 chr2L_12905001 RAL-513 322 chr2L 12933831 12933876 chr2L 12941318 12941363 blood 11 7481 7.0 5.0 6.0 1.6 7532 chr2L 12933831 intergenic not near genes chr2L 12937597 intergenic not near genes chr2L 12941363 intergenic not near genes chr2L_11_12935001 chr2L_12935001 RAL-513 323 chr2L 13036232 13036275 chr2L 13036494 13036537 X-element 12 257 5.0 5.0 5.0 2.0 305 chr2L 13036232 intron CG9932 - chr2L 13036384 intron CG9932 - chr2L 13036537 intron CG9932 - chr2L_12_13035001 chr2L_13035001 RAL-513 324 chr2L 13093834 13093863 chr2L 13093930 13093961 8 93 6.5 1.5 4.0 1.6 127 chr2L 13093834 intergenic not near genes chr2L 13093898 intergenic not near genes chr2L 13093961 intergenic not near genes chr2L_8_13090001 chr2L_13090001 RAL-513 325 chr2L 13122384 13122397 chr2L 13122513 13122513 4 124 10.0 2.5 6.2 0.6 129 chr2L 13122384 intergenic not near genes chr2L 13122448 intergenic not near genes chr2L 13122513 intergenic not near genes chr2L_4_13120001 chr2L_13120001 RAL-513 326 chr2L 13154103 13154112 chr2L 13154199 13154209 5 96 3.5 0.0 1.8 1.8 106 chr2L 13154103 intergenic not near genes chr2L 13154156 intergenic not near genes chr2L 13154209 intergenic not near genes chr2L_5_13150001 chr2L_13150001 RAL-513 327 chr2L 13266368 13266410 chr2L 13266476 13266503 6 98 1.5 6.5 4.0 1.2 135 chr2L 13266368 intron CG44085 + chr2L 13266436 intron CG44085 + chr2L 13266503 intron CG44085 + chr2L_6_13265001 chr2L_13265001 RAL-513 328 chr2L 13320418 13320465 chr2L 13320700 13320733 13 277 2.0 3.0 2.5 3.7 315 chr2L 13320418 intron CG43778 - chr2L 13320576 intron CG43778 - chr2L 13320733 intron CG43778 - chr2L_13_13320001 chr2L_13320001 RAL-513 329 chr2L 13322112 13322129 chr2L 13322250 13322268 6 136 3.5 8.0 5.8 0.9 156 chr2L 13322112 intron CG43778 - chr2L 13322190 intron CG43778 - chr2L 13322268 intron CG43778 - chr2L_6_13320001 chr2L_13320001 RAL-513 330 chr2L 13374305 13374350 chr2L 13374412 13374448 15 99 4.5 2.0 3.2 3.6 143 chr2L 13374305 5` UTR CG6565 + chr2L 13374376 5` UTR CG6565 + chr2L 13374448 5` UTR CG6565 + chr2L_15_13370001 chr2L_13370001 RAL-513 331 chr2L 13405631 13405677 chr2L 13410447 13410482 Doc 14 4810 1.5 6.5 4.0 2.8 4851 chr2L 13405631 exon CG7110 + chr2L 13408056 intron CG7110 + chr2L 13410482 intron CG7110 + chr2L_14_13405001 chr2L_13405001 RAL-513 332 chr2L 13434577 13434613 chr2L 13435058 13435095 8 481 4.0 10.5 7.2 1.0 518 chr2L 13434577 intron CG42784 + chr2L 13434836 intron CG42784 + chr2L 13435095 intron CG42784 + chr2L_8_13430001 chr2L_13430001 RAL-513 333 chr2L 13435425 13435469 chr2L 13435550 13435570 6 108 2.0 3.0 2.5 1.7 145 chr2L 13435425 intron CG42784 + chr2L 13435498 intron CG42784 + chr2L 13435570 intron CG42784 + chr2L_6_13435001 chr2L_13435001 RAL-513 334 chr2L 13440211 13440257 chr2L 13440324 13440347 14 109 4.0 4.5 4.2 2.7 136 chr2L 13440211 intron,3` UTR CG42784 +,CR45683 - chr2L 13440279 intron,3` UTR CG42784 +,CR45683 - chr2L 13440347 intron,3` UTR CG42784 +,CR45683 - chr2L_14_13440001 chr2L_13440001 RAL-513 335 chr2L 13449456 13449479 chr2L 13456912 13456934 Quasimodo 6 7455 5.5 3.5 4.5 1.1 7478 chr2L 13449456 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453195 intron CG42784 + chr2L 13456934 intron CG42784 + chr2L_6_13450001 chr2L_13450001 RAL-513 336 chr2L 13449480 13449490 chr2L 13456902 13456924 Quasimodo 7 7444 4.0 3.0 3.5 1.6 7444 chr2L 13449480 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453202 intron CG42784 + chr2L 13456924 intron CG42784 + chr2L_7_13450001 chr2L_13450001 RAL-513 337 chr2L 13481438 13481470 chr2L 13482065 13482080 jockey 6 624 7.5 8.0 7.8 0.7 642 chr2L 13481438 intron CG42784 + chr2L 13481759 intron CG42784 + chr2L 13482080 intron CG42784 + chr2L_6_13480001 chr2L_13480001 RAL-513 338 chr2L 13493713 13493751 chr2L 13493806 13493836 14 99 2.5 2.0 2.2 4.4 123 chr2L 13493713 intron CG42784 + chr2L 13493774 intron CG42784 + chr2L 13493836 intron CG42784 + chr2L_14_13490001 chr2L_13490001 RAL-513 339 chr2L 13515361 13515372 chr2L 13515458 13515467 5 96 11.5 6.0 8.8 0.5 106 chr2L 13515361 intron B4 - chr2L 13515414 intron B4 - chr2L 13515467 intron B4 - chr2L_5_13515001 chr2L_13515001 RAL-513 340 chr2L 13522263 13522290 chr2L 13527589 13527617 Transpac 15 5326 3.0 8.0 5.5 2.3 5354 chr2L 13522263 intron B4 - chr2L 13524940 intron B4 - chr2L 13527617 intron B4 - chr2L_15_13520001 chr2L_13520001 RAL-513 341 chr2L 13622114 13622169 chr2L 13622233 13622271 17 109 5.5 0.5 3.0 4.2 157 chr2L 13622114 intron kuz + chr2L 13622192 intron kuz + chr2L 13622271 intron kuz + chr2L_17_13620001 chr2L_13620001 RAL-513 342 chr2L 13713540 13713570 chr2L 13713633 13713666 4 95 4.0 0.0 2.0 1.3 126 chr2L 13713540 intron CG31814 - chr2L 13713603 intron CG31814 - chr2L 13713666 intron CG31814 - chr2L_4_13710001 chr2L_13710001 RAL-513 343 chr2L 13725763 13725771 chr2L 13725838 13725877 4 98 0.0 3.0 1.5 1.6 114 chr2L 13725763 intergenic not near genes chr2L 13725820 intergenic not near genes chr2L 13725877 intergenic not near genes chr2L_4_13725001 chr2L_13725001 RAL-513 344 chr2L 13730287 13730314 chr2L 13730426 13730455 10 136 2.0 3.5 2.8 2.6 168 chr2L 13730287 intergenic not near genes chr2L 13730371 intergenic not near genes chr2L 13730455 intergenic not near genes chr2L_10_13730001 chr2L_13730001 RAL-513 345 chr2L 13742147 13742164 chr2L 13742221 13742238 5 89 3.5 1.0 2.2 1.6 91 chr2L 13742147 intergenic not near genes chr2L 13742192 intergenic not near genes chr2L 13742238 intergenic not near genes chr2L_5_13740001 chr2L_13740001 RAL-513 346 chr2L 13752800 13752833 chr2L 13752922 13752935 9 125 2.0 3.0 2.5 2.6 135 chr2L 13752800 intron,intron CR44846 +,TM9SF4 + chr2L 13752868 intron,intron CR44846 +,TM9SF4 + chr2L 13752935 intron,intron CR44846 +,TM9SF4 + chr2L_9_13750001 chr2L_13750001 RAL-513 347 chr2L 13761797 13761832 chr2L 13762923 13762963 Doc 8 1128 5.5 3.5 4.5 1.5 1166 chr2L 13761797 intron TM9SF4 + chr2L 13762380 intron TM9SF4 + chr2L 13762963 intron TM9SF4 + chr2L_8_13760001 chr2L_13760001 RAL-513 348 chr2L 13800160 13800207 chr2L 13800284 13800330 14 118 2.5 4.0 3.2 3.3 170 chr2L 13800160 intergenic Sec71 + chr2L 13800245 intergenic not near genes chr2L 13800330 intergenic not near genes chr2L_14_13800001 chr2L_13800001 RAL-513 349 chr2L 13851723 13851749 chr2L 13851819 13851846 10 95 4.5 3.5 4.0 2.0 123 chr2L 13851723 intron CenG1A + chr2L 13851784 intron CenG1A + chr2L 13851846 intron CenG1A + chr2L_10_13850001 chr2L_13850001 RAL-513 350 chr2L 13853069 13853116 chr2L 13862239 13862269 roo 15 9165 3.0 2.5 2.8 3.9 9200 chr2L 13853069 intron CenG1A + chr2L 13857669 intron CenG1A + chr2L 13862269 intron CenG1A + chr2L_15_13855001 chr2L_13855001 RAL-513 351 chr2L 13972339 13972360 chr2L 13972884 13972904 6 545 4.0 5.5 4.8 1.0 565 chr2L 13972339 exon He - chr2L 13972622 intron He - chr2L 13972904 5` UTR He - chr2L_6_13970001 chr2L_13970001 RAL-513 352 chr2L 14085490 14085493 chr2L 14085712 14085726 4 224 19.0 12.0 15.5 0.2 236 chr2L 14085490 intron nAChRalpha5 + chr2L 14085608 intron nAChRalpha5 + chr2L 14085726 intron nAChRalpha5 + chr2L_4_14085001 chr2L_14085001 RAL-513 353 chr2L 14126620 14126667 chr2L 14126711 14126763 9 83 3.0 2.0 2.5 2.6 143 chr2L 14126620 intergenic not near genes chr2L 14126692 intergenic not near genes chr2L 14126763 intergenic not near genes chr2L_9_14125001 chr2L_14125001 RAL-513 354 chr2L 14148653 14148687 chr2L 14148791 14148824 8 138 2.5 4.5 3.5 1.8 171 chr2L 14148653 intron CG17341 + chr2L 14148738 intron CG17341 + chr2L 14148824 intron CG17341 + chr2L_8_14145001 chr2L_14145001 RAL-513 355 chr2L 14180043 14180093 chr2L 14180139 14180189 19 93 7.5 5.0 6.2 2.6 146 chr2L 14180043 intron CG43333 - chr2L 14180116 intron CG43333 - chr2L 14180189 intron CG43333 - chr2L_19_14180001 chr2L_14180001 RAL-513 356 chr2L 14198173 14198219 chr2L 14198416 14198462 14 241 5.0 2.0 3.5 3.1 289 chr2L 14198173 intron Dyrk2 - chr2L 14198318 intron Dyrk2 - chr2L 14198462 intron Dyrk2 - chr2L_14_14195001 chr2L_14195001 RAL-513 357 chr2L 14300165 14300206 chr2L 14300262 14300299 14 95 6.0 5.0 5.5 2.2 134 chr2L 14300165 intron wb + chr2L 14300232 intron wb + chr2L 14300299 intron wb + chr2L_14_14300001 chr2L_14300001 RAL-513 358 chr2L 14494076 14494121 chr2L 14494460 14494505 10 381 6.0 5.0 5.5 1.5 429 chr2L 14494076 intergenic noc + chr2L 14494290 intergenic noc + chr2L 14494505 intergenic noc + chr2L_10_14490001 chr2L_14490001 RAL-513 359 chr2L 14564691 14564694 chr2L 14564795 14564797 4 104 9.0 0.0 4.5 0.7 106 chr2L 14564691 intergenic not near genes chr2L 14564744 intergenic not near genes chr2L 14564797 intergenic not near genes chr2L_4_14560001 chr2L_14560001 RAL-513 360 chr2L 14564695 14564722 chr2L 14564793 14564826 4 102 6.0 0.0 3.0 1.0 131 chr2L 14564695 intergenic not near genes chr2L 14564760 intergenic not near genes chr2L 14564826 intergenic not near genes chr2L_4_14560001 chr2L_14560001 RAL-513 361 chr2L 14601959 14601997 chr2L 14602063 14602100 12 102 5.0 2.5 3.8 2.5 141 chr2L 14601959 exon osp - chr2L 14602030 intron osp - chr2L 14602100 intron osp - chr2L_12_14600001 chr2L_14600001 RAL-513 362 chr2L 14605625 14605646 chr2L 14605726 14605747 4 99 9.0 7.0 8.0 0.4 122 chr2L 14605625 intron osp - chr2L 14605686 intron osp - chr2L 14605747 intron osp - chr2L_4_14605001 chr2L_14605001 RAL-513 363 chr2L 14658668 14658716 chr2L 14658769 14658811 6 99 1.5 2.0 1.8 2.1 143 chr2L 14658668 intron osp - chr2L 14658740 intron osp - chr2L 14658811 intron osp - chr2L_6_14655001 chr2L_14655001 RAL-513 364 chr2L 14778794 14778812 chr2L 14779101 14779103 4 302 6.0 4.0 5.0 0.7 309 chr2L 14778794 intergenic not near genes chr2L 14778948 intergenic not near genes chr2L 14779103 intergenic not near genes chr2L_4_14775001 chr2L_14775001 RAL-513 365 chr2L 14778820 14778834 chr2L 14779098 14779114 6 288 3.5 4.0 3.8 1.2 294 chr2L 14778820 intergenic not near genes chr2L 14778967 intergenic not near genes chr2L 14779114 intergenic not near genes chr2L_6_14775001 chr2L_14775001 RAL-513 366 chr2L 14784521 14784556 chr2L 14784627 14784671 8 103 5.5 4.0 4.8 1.4 150 chr2L 14784521 exon CG18636 - chr2L 14784596 5` UTR CG18636 - chr2L 14784671 intergenic CG18636 - chr2L_8_14780001 chr2L_14780001 RAL-513 367 chr2L 14803859 14803909 chr2L 14809082 14809126 copia 12 5215 8.5 4.5 6.5 1.6 5267 chr2L 14803859 intergenic not near genes chr2L 14806492 intergenic not near genes chr2L 14809126 intergenic not near genes chr2L_12_14805001 chr2L_14805001 RAL-513 368 chr2L 14840983 14841008 chr2L 14841088 14841114 5 98 1.5 4.5 3.0 1.2 131 chr2L 14840983 3` UTR CR43805 - chr2L 14841048 3` UTR CR43805 - chr2L 14841114 3` UTR CR43805 - chr2L_5_14840001 chr2L_14840001 RAL-513 369 chr2L 14889931 14889974 chr2L 14890376 14890418 jockey 12 441 5.0 4.0 4.5 2.2 487 chr2L 14889931 intergenic not near genes chr2L 14890174 intergenic not near genes chr2L 14890418 intergenic not near genes chr2L_12_14890001 chr2L_14890001 RAL-513 370 chr2L 14945426 14945462 chr2L 14945542 14945576 5 112 2.0 0.5 1.2 2.3 150 chr2L 14945426 intron CG42313 - chr2L 14945501 intron CG42313 - chr2L 14945576 intron CG42313 - chr2L_5_14945001 chr2L_14945001 RAL-513 371 chr2L 14984365 14984402 chr2L 14991987 14992020 opus 7 7616 8.5 5.5 7.0 0.9 7655 chr2L 14984365 intron mol - chr2L 14988192 intron mol - chr2L 14992020 intron mol - chr2L_7_14985001 chr2L_14985001 RAL-513 372 chr2L 15000854 15000901 chr2L 15000960 15001008 13 110 27.5 25.5 26.5 0.5 154 chr2L 15000854 intergenic not near genes chr2L 15000931 intergenic not near genes chr2L 15001008 intergenic not near genes chr2L_13_15000001 chr2L_15000001 RAL-513 373 chr2L 15013144 15013177 chr2L 15013264 15013306 5 127 1.5 3.5 2.5 1.4 162 chr2L 15013144 intergenic CR43856 - chr2L 15013225 intergenic not near genes chr2L 15013306 intergenic not near genes chr2L_5_15010001 chr2L_15010001 RAL-513 374 chr2L 15044705 15044740 chr2L 15044787 15044826 7 86 2.0 0.5 1.2 3.2 121 chr2L 15044705 intergenic ck - chr2L 15044766 intergenic ck - chr2L 15044826 intergenic ck - chr2L_7_15040001 chr2L_15040001 RAL-513 375 chr2L 15056702 15056740 chr2L 15056811 15056849 12 106 2.0 3.5 2.8 3.2 147 chr2L 15056702 intron ck - chr2L 15056776 intron ck - chr2L 15056849 intron ck - chr2L_12_15055001 chr2L_15055001 RAL-513 376 chr2L 15078055 15078100 chr2L 15078163 15078192 15 105 2.5 4.0 3.2 3.6 137 chr2L 15078055 intron CG15270 + chr2L 15078124 intron CG15270 + chr2L 15078192 intron CG15270 + chr2L_15_15075001 chr2L_15075001 RAL-513 377 chr2L 15079888 15079930 chr2L 15079997 15080042 11 111 5.0 6.5 5.8 1.6 154 chr2L 15079888 intron CG15270 + chr2L 15079965 intron CG15270 + chr2L 15080042 intron CG15270 + chr2L_11_15075001 chr2L_15075001 RAL-513 378 chr2L 15082649 15082690 chr2L 15082762 15082804 11 110 3.0 1.0 2.0 3.7 155 chr2L 15082649 intron CG15270 + chr2L 15082726 intron CG15270 + chr2L 15082804 intron CG15270 + chr2L_11_15080001 chr2L_15080001 RAL-513 379 chr2L 15098528 15098532 chr2L 15098620 15098631 4 96 12.0 5.0 8.5 0.4 103 chr2L 15098528 intergenic not near genes chr2L 15098580 intergenic not near genes chr2L 15098631 intergenic not near genes chr2L_4_15095001 chr2L_15095001 RAL-513 380 chr2L 15138758 15138804 chr2L 15138861 15138908 5 102 0.0 2.5 1.2 2.3 150 chr2L 15138758 intergenic not near genes chr2L 15138833 intergenic not near genes chr2L 15138908 intergenic not near genes chr2L_5_15135001 chr2L_15135001 RAL-513 381 chr2L 15186987 15187032 chr2L 15187211 15187257 13 215 1.5 3.0 2.2 4.1 270 chr2L 15186987 intron CG4168 - chr2L 15187122 intron CG4168 - chr2L 15187257 intron CG4168 - chr2L_13_15185001 chr2L_15185001 RAL-513 382 chr2L 15226351 15226395 chr2L 15226446 15226475 7 91 3.0 3.5 3.2 1.7 124 chr2L 15226351 intergenic not near genes chr2L 15226413 intergenic not near genes chr2L 15226475 intergenic not near genes chr2L_7_15225001 chr2L_15225001 RAL-513 383 chr2L 15332238 15332253 chr2L 15332598 15332603 5 358 1.5 0.0 0.8 2.8 365 chr2L 15332238 intergenic not near genes chr2L 15332420 intergenic not near genes chr2L 15332603 intergenic not near genes chr2L_5_15330001 chr2L_15330001 RAL-513 384 chr2L 15443310 15443353 chr2L 15443408 15443455 23 96 4.5 3.5 4.0 4.6 145 chr2L 15443310 intergenic not near genes chr2L 15443382 intergenic not near genes chr2L 15443455 intergenic not near genes chr2L_23_15440001 chr2L_15440001 RAL-513 385 chr2L 15446040 15446068 chr2L 15453529 15453557 blood 6 7489 5.0 2.0 3.5 1.3 7517 chr2L 15446040 intergenic not near genes chr2L 15449798 intergenic not near genes chr2L 15453557 intergenic not near genes chr2L_6_15445001 chr2L_15445001 RAL-513 386 chr2L 15482559 15482606 chr2L 15482715 15482760 9 151 1.5 4.5 3.0 2.2 201 chr2L 15482559 intergenic not near genes chr2L 15482660 intergenic not near genes chr2L 15482760 intergenic not near genes chr2L_9_15480001 chr2L_15480001 RAL-513 387 chr2L 15499897 15499945 chr2L 15500005 15500052 4 108 0.5 3.0 1.8 1.4 155 chr2L 15499897 intron lace + chr2L 15499974 intron lace + chr2L 15500052 intron lace + chr2L_4_15495001 chr2L_15495001 RAL-513 388 chr2L 15514305 15514327 chr2L 15514409 15514431 6 102 3.5 8.5 6.0 0.9 126 chr2L 15514305 intergenic not near genes chr2L 15514368 intergenic not near genes chr2L 15514431 intergenic not near genes chr2L_6_15510001 chr2L_15510001 RAL-513 389 chr2L 15586404 15586437 chr2L 15593476 15593509 297 7 7068 3.5 2.5 3.0 1.8 7105 chr2L 15586404 intergenic not near genes chr2L 15589956 intergenic not near genes chr2L 15593509 intergenic not near genes chr2L_7_15585001 chr2L_15585001 RAL-513 390 chr2L 15598749 15598776 chr2L 15598847 15598875 4 98 4.5 0.0 2.2 1.2 126 chr2L 15598749 intergenic not near genes chr2L 15598812 intergenic not near genes chr2L 15598875 intergenic not near genes chr2L_4_15595001 chr2L_15595001 RAL-513 391 chr2L 15785921 15785969 chr2L 15786011 15786030 20 91 5.5 3.5 4.5 3.6 109 chr2L 15785921 exon CG18109 + chr2L 15785976 exon CG18109 + chr2L 15786030 exon CG18109 + chr2L_20_15785001 chr2L_15785001 RAL-513 392 chr2L 15819320 15819345 chr2L 15819389 15819402 5 82 1.5 1.0 1.2 2.3 82 chr2L 15819320 intergenic not near genes chr2L 15819361 intergenic not near genes chr2L 15819402 intergenic not near genes chr2L_5_15815001 chr2L_15815001 RAL-513 393 chr2L 15843188 15843241 chr2L 15845880 15845933 8 2698 16.5 7.5 12.0 0.6 2745 chr2L 15843188 intergenic not near genes chr2L 15844560 intergenic not near genes chr2L 15845933 intergenic not near genes chr2L_8_15840001 chr2L_15840001 RAL-513 394 chr2L 15935180 15935219 chr2L 15935289 15935309 4 104 3.5 1.0 2.2 1.2 129 chr2L 15935180 intron beat-Ib - chr2L 15935244 intron beat-Ib - chr2L 15935309 intron beat-Ib - chr2L_4_15935001 chr2L_15935001 RAL-513 395 chr2L 15954169 15954209 chr2L 15954268 15954308 4 100 3.5 6.5 5.0 0.7 139 chr2L 15954169 intron beat-Ib - chr2L 15954238 intron beat-Ib - chr2L 15954308 intron beat-Ib - chr2L_4_15950001 chr2L_15950001 RAL-513 396 chr2L 15956012 15956058 chr2L 15957491 15957526 hobo 8 1476 2.5 5.0 3.8 1.7 1514 chr2L 15956012 intron beat-Ib - chr2L 15956769 intron beat-Ib - chr2L 15957526 intron beat-Ib - chr2L_8_15955001 chr2L_15955001 RAL-513 397 chr2L 16058105 16058142 chr2L 16058266 16058303 7 161 4.5 2.0 3.2 1.7 198 chr2L 16058105 intron beat-Ia + chr2L 16058204 intron beat-Ia + chr2L 16058303 intron beat-Ia + chr2L_7_16055001 chr2L_16055001 RAL-513 398 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 16 145889 12.5 24.0 18.2 0.8 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_16_16140001 chr2L_16140001 RAL-513 399 chr2L 16141153 16141162 chr2L 16146372 16146379 copia 4 5222 11.0 3.0 7.0 0.5 5226 chr2L 16141153 intergenic not near genes chr2L 16143766 intergenic not near genes chr2L 16146379 intergenic not near genes chr2L_4_16140001 chr2L_16140001 RAL-513 400 chr2L 16141172 16141191 chr2L 16146368 16146417 copia 6 5222 5.5 3.0 4.2 1.2 5245 chr2L 16141172 intergenic not near genes chr2L 16143794 intergenic not near genes chr2L 16146417 intergenic not near genes chr2L_6_16140001 chr2L_16140001 RAL-513 401 chr2L 9084336 9084340 chr2L 16217660 16217660 6 7133322 26.0 24.0 25.0 0.2 7133324 chr2L 9084336 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_6_12650001 chr2L_12650001 RAL-513 402 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 7 145889 12.5 24.0 18.2 0.4 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_7_16140001 chr2L_16140001 RAL-513 403 chr2L 16226162 16226209 chr2L 16226269 16226316 11 104 1.0 2.5 1.8 3.9 154 chr2L 16226162 intergenic not near genes chr2L 16226239 intergenic not near genes chr2L 16226316 intergenic not near genes chr2L_11_16225001 chr2L_16225001 RAL-513 404 chr2L 16243684 16243694 chr2L 16243784 16243797 4 102 0.0 4.0 2.0 1.3 113 chr2L 16243684 exon CG42818 + chr2L 16243740 exon CG42818 + chr2L 16243797 exon CG42818 + chr2L_4_16240001 chr2L_16240001 RAL-513 405 chr2L 16243695 16243859 chr2L 16243777 16243969 12 106 3.0 3.0 3.0 3.0 274 chr2L 16243695 exon CG42818 + chr2L 16243832 exon CG42818 + chr2L 16243969 exon CG42818 + chr2L_12_16240001 chr2L_16240001 RAL-513 406 chr2L 16254872 16254916 chr2L 16255151 16255195 11 279 3.0 6.5 4.8 1.9 323 chr2L 16254872 intron PRL-1 - chr2L 16255034 intron PRL-1 - chr2L 16255195 intron PRL-1 - chr2L_11_16255001 chr2L_16255001 RAL-513 407 chr2L 16263998 16264001 chr2L 16264087 16264112 4 103 8.5 3.5 6.0 0.6 114 chr2L 16263998 3` UTR crp - chr2L 16264055 3` UTR crp - chr2L 16264112 3` UTR crp - chr2L_4_16260001 chr2L_16260001 RAL-513 408 chr2L 16280250 16280286 chr2L 16281424 16281469 1360 7 1182 4.5 3.5 4.0 1.4 1219 chr2L 16280250 intron crp - chr2L 16280860 intron crp - chr2L 16281469 intron crp - chr2L_7_16280001 chr2L_16280001 RAL-513 409 chr2L 16391785 16391805 chr2L 16391880 16391901 7 95 2.5 0.5 1.5 2.8 116 chr2L 16391785 intergenic not near genes chr2L 16391843 intergenic not near genes chr2L 16391901 intergenic not near genes chr2L_7_16390001 chr2L_16390001 RAL-513 410 chr2L 16458813 16458854 chr2L 16459028 16459070 4 216 0.0 1.0 0.5 2.7 257 chr2L 16458813 intergenic not near genes chr2L 16458942 intergenic not near genes chr2L 16459070 intergenic not near genes chr2L_4_16455001 chr2L_16455001 RAL-513 411 chr2L 16511947 16511980 chr2L 16519080 16519113 HMS-Beagle 4 7134 5.5 2.5 4.0 0.8 7166 chr2L 16511947 intron CG5953 - chr2L 16515530 intron CG5953 - chr2L 16519113 intron CG5953 - chr2L_4_16515001 chr2L_16515001 RAL-513 412 chr2L 16537317 16537334 chr2L 16537395 16537413 7 90 3.0 3.5 3.2 1.7 96 chr2L 16537317 intergenic not near genes chr2L 16537365 intergenic not near genes chr2L 16537413 intergenic not near genes chr2L_7_16535001 chr2L_16535001 RAL-513 413 chr2L 16570856 16570867 chr2L 16570921 16570953 7 85 1.5 4.0 2.8 1.8 97 chr2L 16570856 intron CG42389 + chr2L 16570904 intron CG42389 + chr2L 16570953 intron CG42389 + chr2L_7_16570001 chr2L_16570001 RAL-513 414 chr2L 16573614 16573642 chr2L 16573721 16573723 8 102 3.0 7.0 5.0 1.3 109 chr2L 16573614 intron CG42389 + chr2L 16573668 intron CG42389 + chr2L 16573723 intron CG42389 + chr2L_8_16570001 chr2L_16570001 RAL-513 415 chr2L 16573644 16573663 chr2L 16573717 16573772 7 96 3.0 5.5 4.2 1.3 128 chr2L 16573644 intron CG42389 + chr2L 16573708 intron CG42389 + chr2L 16573772 intron CG42389 + chr2L_7_16570001 chr2L_16570001 RAL-513 416 chr2L 16585770 16585815 chr2L 16585879 16585924 14 107 5.0 4.0 4.5 2.5 154 chr2L 16585770 intron CG42389 + chr2L 16585847 intron CG42389 + chr2L 16585924 intron CG42389 + chr2L_14_16585001 chr2L_16585001 RAL-513 417 chr2L 16697077 16697250 chr2L 16697247 16697359 4 139 0.0 0.0 0.0 4.0 282 chr2L 16697077 intron grp + chr2L 16697218 intron grp + chr2L 16697359 intron,3` UTR grp +,CR44975 - chr2L_4_16695001 chr2L_16695001 RAL-513 418 chr2L 16764953 16764998 chr2L 16765052 16765098 8 96 1.0 1.0 1.0 4.0 145 chr2L 16764953 intergenic not near genes chr2L 16765026 intergenic not near genes chr2L 16765098 intergenic not near genes chr2L_8_16765001 chr2L_16765001 RAL-513 419 chr2L 16791226 16791243 chr2L 16791321 16791349 5 103 4.0 6.0 5.0 0.8 123 chr2L 16791226 intergenic CG17928 + chr2L 16791288 intergenic CG17928 + chr2L 16791349 intergenic CG17928 + chr2L_5_16790001 chr2L_16790001 RAL-513 420 chr2L 16796086 16796109 chr2L 16796190 16796230 5 112 0.5 3.5 2.0 1.7 144 chr2L 16796086 intergenic Ugt36Ba + chr2L 16796158 intergenic Ugt36Ba +,Ugt36Bb + chr2L 16796230 intergenic Ugt36Ba +,Ugt36Bb + chr2L_5_16795001 chr2L_16795001 RAL-513 421 chr2L 16840999 16841040 chr2L 16841095 16841133 6 95 2.0 4.0 3.0 1.5 134 chr2L 16840999 intron,intron SclA +,SclB + chr2L 16841066 intron,intron SclA +,SclB + chr2L 16841133 intron,intron SclA +,SclB + chr2L_6_16840001 chr2L_16840001 RAL-513 422 chr2L 16850549 16850558 chr2L 16850655 16850667 5 109 4.5 4.5 4.5 0.9 118 chr2L 16850549 intron CG31810 - chr2L 16850608 intron CG31810 - chr2L 16850667 intron CG31810 - chr2L_5_16850001 chr2L_16850001 RAL-513 423 chr2L 16867005 16867036 chr2L 16867120 16867150 11 114 3.0 2.5 2.8 2.9 145 chr2L 16867005 intergenic not near genes chr2L 16867078 intergenic not near genes chr2L 16867150 intergenic not near genes chr2L_11_16865001 chr2L_16865001 RAL-513 424 chr2L 16958087 16958129 chr2L 16962895 16962937 Doc 7 4806 2.0 0.5 1.2 3.2 4850 chr2L 16958087 intergenic not near genes chr2L 16960512 intergenic not near genes chr2L 16962937 intergenic not near genes chr2L_7_16960001 chr2L_16960001 RAL-513 425 chr2L 16968228 16968264 chr2L 16968327 16968366 9 105 2.5 4.0 3.2 2.1 138 chr2L 16968228 intergenic not near genes chr2L 16968297 intergenic not near genes chr2L 16968366 intergenic not near genes chr2L_9_16965001 chr2L_16965001 RAL-513 426 chr2L 16974624 16974658 chr2L 16974747 16974780 6 123 1.0 1.0 1.0 3.0 156 chr2L 16974624 intron beat-IIIb + chr2L 16974702 intron beat-IIIb + chr2L 16974780 intron beat-IIIb + chr2L_6_16970001 chr2L_16970001 RAL-513 427 chr2L 17018705 17018733 chr2L 17018787 17018820 8 90 3.5 2.0 2.8 2.1 115 chr2L 17018705 intergenic not near genes chr2L 17018762 intergenic not near genes chr2L 17018820 intergenic not near genes chr2L_8_17015001 chr2L_17015001 RAL-513 428 chr2L 17032486 17032504 chr2L 17032591 17032609 5 103 5.0 4.0 4.5 0.9 123 chr2L 17032486 intergenic not near genes chr2L 17032548 intergenic not near genes chr2L 17032609 intergenic not near genes chr2L_5_17030001 chr2L_17030001 RAL-513 429 chr2L 17102985 17103025 chr2L 17103093 17103101 6 102 2.5 2.0 2.2 1.9 116 chr2L 17102985 intergenic not near genes chr2L 17103043 intergenic not near genes chr2L 17103101 intergenic not near genes chr2L_6_17100001 chr2L_17100001 RAL-513 430 chr2L 17165056 17165073 chr2L 17165697 17165737 5 652 3.0 4.5 3.8 1.0 681 chr2L 17165056 intron,intron CG34106 +,beat-IIIa + chr2L 17165396 intron,intron CG34106 +,beat-IIIa + chr2L 17165737 intron,intron CG34106 +,beat-IIIa + chr2L_5_17165001 chr2L_17165001 RAL-513 431 chr2L 17167548 17167583 chr2L 17167805 17167844 pogo 6 260 4.5 4.0 4.2 1.2 296 chr2L 17167548 intron,intron CG34106 +,beat-IIIa + chr2L 17167696 intron,intron CG34106 +,beat-IIIa + chr2L 17167844 intron,intron CG34106 +,beat-IIIa + chr2L_6_17165001 chr2L_17165001 RAL-513 432 chr2L 17168177 17168224 chr2L 17168974 17169013 5 787 2.5 2.0 2.2 1.6 836 chr2L 17168177 intron,intron CG34106 +,beat-IIIa + chr2L 17168595 intron,intron CG34106 +,beat-IIIa + chr2L 17169013 intron,intron CG34106 +,beat-IIIa + chr2L_5_17165001 chr2L_17165001 RAL-513 433 chr2L 17199156 17199185 chr2L 17200631 17200672 hobo 6 1484 7.0 2.0 4.5 1.1 1516 chr2L 17199156 intron beat-IIIc - chr2L 17199914 intron beat-IIIc - chr2L 17200672 intron beat-IIIc - chr2L_6_17195001 chr2L_17195001 RAL-513 434 chr2L 17233498 17233507 chr2L 17233599 17233609 4 102 2.5 6.5 4.5 0.7 111 chr2L 17233498 intron beat-IIIc - chr2L 17233554 intron beat-IIIc - chr2L 17233609 intron beat-IIIc - chr2L_4_17230001 chr2L_17230001 RAL-513 435 chr2L 17261198 17261238 chr2L 17261308 17261349 7 110 1.0 4.5 2.8 1.8 151 chr2L 17261198 intergenic beat-IIIc - chr2L 17261274 intergenic not near genes chr2L 17261349 intergenic not near genes chr2L_7_17260001 chr2L_17260001 RAL-513 436 chr2L 17264722 17264771 chr2L 17264822 17264871 7 96 4.5 2.0 3.2 1.7 149 chr2L 17264722 intergenic not near genes chr2L 17264796 intergenic not near genes chr2L 17264871 intergenic not near genes chr2L_7_17260001 chr2L_17260001 RAL-513 437 chr2L 17273183 17273215 chr2L 17277985 17278017 F-element 9 4798 8.5 4.0 6.2 1.2 4834 chr2L 17273183 intergenic not near genes chr2L 17275600 intergenic not near genes chr2L 17278017 intergenic not near genes chr2L_9_17275001 chr2L_17275001 RAL-513 438 chr2L 17292869 17292876 chr2L 17292965 17292973 4 97 8.5 3.5 6.0 0.6 104 chr2L 17292869 intergenic not near genes chr2L 17292921 intergenic not near genes chr2L 17292973 intergenic not near genes chr2L_4_17290001 chr2L_17290001 RAL-513 439 chr2L 17292882 17292912 chr2L 17292962 17292987 9 90 4.5 3.0 3.8 1.9 105 chr2L 17292882 intergenic not near genes chr2L 17292934 intergenic not near genes chr2L 17292987 intergenic not near genes chr2L_9_17290001 chr2L_17290001 RAL-513 440 chr2L 17294257 17294271 chr2L 17294546 17294582 7 298 11.0 9.0 10.0 0.6 325 chr2L 17294257 intergenic not near genes chr2L 17294420 intergenic not near genes chr2L 17294582 intergenic not near genes chr2L_7_17290001 chr2L_17290001 RAL-513 441 chr2L 17327897 17327924 chr2L 17328002 17328030 5 105 3.5 5.0 4.2 1.0 133 chr2L 17327897 intergenic not near genes chr2L 17327964 intergenic not near genes chr2L 17328030 intergenic not near genes chr2L_5_17325001 chr2L_17325001 RAL-513 442 chr2L 17329072 17329106 chr2L 17329202 17329254 11 144 3.0 1.5 2.2 3.4 182 chr2L 17329072 intergenic not near genes chr2L 17329163 intergenic not near genes chr2L 17329254 intergenic not near genes chr2L_11_17325001 chr2L_17325001 RAL-513 443 chr2L 17335557 17335577 chr2L 17336716 17336761 1360 6 1176 3.5 4.0 3.8 1.2 1204 chr2L 17335557 intergenic not near genes chr2L 17336159 intergenic not near genes chr2L 17336761 intergenic not near genes chr2L_6_17335001 chr2L_17335001 RAL-513 444 chr2L 17344860 17344906 chr2L 17344957 17345003 9 92 2.0 2.0 2.0 3.0 143 chr2L 17344860 intergenic not near genes chr2L 17344932 intergenic not near genes chr2L 17345003 intergenic not near genes chr2L_9_17340001 chr2L_17340001 RAL-513 445 chr2L 17353043 17353073 chr2L 17353131 17353171 6 90 6.0 0.5 3.2 1.4 128 chr2L 17353043 intergenic not near genes chr2L 17353107 intergenic not near genes chr2L 17353171 intergenic not near genes chr2L_6_17350001 chr2L_17350001 RAL-513 446 chr2L 17399309 17399318 chr2L 17399479 17399488 4 169 8.0 4.5 6.2 0.6 179 chr2L 17399309 intron CLIP-190 + chr2L 17399398 intron CLIP-190 + chr2L 17399488 intron CLIP-190 + chr2L_4_17395001 chr2L_17395001 RAL-513 447 chr2L 17399324 17399356 chr2L 17399477 17399495 7 160 3.0 4.5 3.8 1.5 171 chr2L 17399324 intron CLIP-190 + chr2L 17399410 intron CLIP-190 + chr2L 17399495 intron CLIP-190 + chr2L_7_17395001 chr2L_17395001 RAL-513 448 chr2L 17425748 17425795 chr2L 17425895 17425942 11 147 3.0 4.5 3.8 2.3 194 chr2L 17425748 intron Dif - chr2L 17425845 intron Dif - chr2L 17425942 intron Dif - chr2L_11_17425001 chr2L_17425001 RAL-513 449 chr2L 17432013 17432042 chr2L 17432140 17432169 1360 5 126 0.0 3.5 1.8 1.8 156 chr2L 17432013 intron Dif - chr2L 17432091 intron Dif - chr2L 17432169 intron Dif - chr2L_5_17430001 chr2L_17430001 RAL-513 450 chr2L 17517839 17517879 chr2L 17517942 17517982 9 95 3.0 0.0 1.5 3.6 143 chr2L 17517839 intron Dhc36C + chr2L 17517910 intron Dhc36C + chr2L 17517982 intron Dhc36C + chr2L_9_17515001 chr2L_17515001 RAL-513 451 chr2L 17623650 17623700 chr2L 17623900 17623950 10 248 4.0 2.0 3.0 2.5 300 chr2L 17623650 intergenic not near genes chr2L 17623800 intergenic not near genes chr2L 17623950 intergenic not near genes chr2L_10_17620001 chr2L_17620001 RAL-513 452 chr2L 17662739 17662773 chr2L 17662827 17662835 6 78 4.0 3.5 3.8 1.2 96 chr2L 17662739 intron CadN - chr2L 17662787 intron CadN - chr2L 17662835 intron CadN - chr2L_6_17660001 chr2L_17660001 RAL-513 453 chr2L 17675948 17675968 chr2L 17676024 17676067 4 88 2.0 1.5 1.8 1.4 119 chr2L 17675948 intron CadN - chr2L 17676008 intron CadN - chr2L 17676067 intron CadN - chr2L_4_17675001 chr2L_17675001 RAL-513 454 chr2L 17692927 17692977 chr2L 17693060 17693111 16 132 1.5 1.0 1.2 7.3 184 chr2L 17692927 intron CadN - chr2L 17693019 intron CadN - chr2L 17693111 intron CadN - chr2L_16_17690001 chr2L_17690001 RAL-513 455 chr2L 17703634 17703675 chr2L 17703741 17703786 8 108 5.0 4.5 4.8 1.4 152 chr2L 17703634 intron CadN - chr2L 17703710 intron CadN - chr2L 17703786 intron CadN - chr2L_8_17700001 chr2L_17700001 RAL-513 456 chr2L 17709104 17709114 chr2L 17709207 17709218 4 103 4.5 2.0 3.2 1.0 114 chr2L 17709104 intron CadN - chr2L 17709161 intron CadN - chr2L 17709218 intron CadN - chr2L_4_17705001 chr2L_17705001 RAL-513 457 chr2L 17709118 17709148 chr2L 17709206 17709250 9 98 2.5 2.0 2.2 2.8 132 chr2L 17709118 intron CadN - chr2L 17709184 intron CadN - chr2L 17709250 intron CadN - chr2L_9_17705001 chr2L_17705001 RAL-513 458 chr2L 17727851 17727879 chr2L 17729342 17729364 hobo 4 1483 3.5 7.5 5.5 0.6 1513 chr2L 17727851 intron CadN - chr2L 17728608 intron CadN - chr2L 17729364 intron CadN - chr2L_4_17725001 chr2L_17725001 RAL-513 459 chr2L 17741952 17741990 chr2L 17742048 17742070 12 92 4.0 5.0 4.5 2.2 118 chr2L 17741952 intron CadN - chr2L 17742011 intron CadN - chr2L 17742070 intron CadN - chr2L_12_17740001 chr2L_17740001 RAL-513 460 chr2L 17747976 17747998 chr2L 17748072 17748095 6 96 9.5 3.5 6.5 0.8 119 chr2L 17747976 intron CadN - chr2L 17748036 intron CadN - chr2L 17748095 intron CadN - chr2L_6_17745001 chr2L_17745001 RAL-513 461 chr2L 17748005 17748022 chr2L 17748071 17748105 4 79 5.0 3.5 4.2 0.8 100 chr2L 17748005 intron CadN - chr2L 17748055 intron CadN - chr2L 17748105 intron CadN - chr2L_4_17745001 chr2L_17745001 RAL-513 462 chr2L 17796030 17796045 chr2L 17796114 17796145 5 97 2.0 3.0 2.5 1.4 115 chr2L 17796030 intron CadN2 - chr2L 17796088 intron CadN2 - chr2L 17796145 intron CadN2 - chr2L_5_17795001 chr2L_17795001 RAL-513 463 chr2L 17819899 17819931 chr2L 17825123 17825154 copia 7 5224 5.0 4.5 4.8 1.2 5255 chr2L 17819899 intron CadN2 - chr2L 17822526 intron CadN2 - chr2L 17825154 intron CadN2 - chr2L_7_17820001 chr2L_17820001 RAL-513 464 chr2L 17863594 17863640 chr2L 17863695 17863740 6 93 1.5 2.5 2.0 2.0 146 chr2L 17863594 intron CadN2 - chr2L 17863667 intron CadN2 - chr2L 17863740 intron CadN2 - chr2L_6_17860001 chr2L_17860001 RAL-513 465 chr2L 17898666 17898694 chr2L 17898834 17898835 5 162 5.0 6.0 5.5 0.8 169 chr2L 17898666 intergenic not near genes chr2L 17898750 intergenic not near genes chr2L 17898835 intergenic not near genes chr2L_5_17895001 chr2L_17895001 RAL-513 466 chr2L 17906740 17906783 chr2L 17906841 17906885 7 98 4.0 2.0 3.0 1.8 145 chr2L 17906740 intergenic not near genes chr2L 17906812 intergenic not near genes chr2L 17906885 intergenic not near genes chr2L_7_17905001 chr2L_17905001 RAL-513 467 chr2L 17943588 17943607 chr2L 17943683 17943702 4 96 6.0 5.5 5.8 0.6 114 chr2L 17943588 intergenic not near genes chr2L 17943645 intergenic not near genes chr2L 17943702 intergenic not near genes chr2L_4_17940001 chr2L_17940001 RAL-513 468 chr2L 17943609 17943632 chr2L 17943675 17943710 6 85 6.5 3.5 5.0 1.0 101 chr2L 17943609 intergenic not near genes chr2L 17943660 intergenic not near genes chr2L 17943710 intergenic not near genes chr2L_6_17940001 chr2L_17940001 RAL-513 469 chr2L 17951926 17951948 chr2L 17953413 17953433 hobo 8 1484 6.5 6.0 6.2 1.1 1507 chr2L 17951926 intergenic CR44398 -,CR44397 - chr2L 17952680 intergenic not near genes chr2L 17953433 intergenic not near genes chr2L_8_17950001 chr2L_17950001 RAL-513 470 chr2L 17951954 17951974 chr2L 17953410 17953461 hobo 9 1478 3.0 4.5 3.8 1.9 1507 chr2L 17951954 intergenic CR44398 -,CR44397 - chr2L 17952708 intergenic not near genes chr2L 17953461 intergenic not near genes chr2L_9_17950001 chr2L_17950001 RAL-513 471 chr2L 18044249 18044278 chr2L 18044573 18044617 5 335 1.5 1.0 1.2 2.3 368 chr2L 18044249 intron rdo + chr2L 18044433 intron rdo + chr2L 18044617 intron rdo + chr2L_5_18040001 chr2L_18040001 RAL-513 472 chr2L 18051881 18051901 chr2L 18061023 18061054 roo 5 9152 6.0 4.5 5.2 0.8 9173 chr2L 18051881 intron rdo + chr2L 18056468 intron rdo + chr2L 18061054 intron rdo + chr2L_5_18055001 chr2L_18055001 RAL-513 473 chr2L 18090679 18090699 chr2L 18090761 18090807 7 99 6.0 3.0 4.5 1.3 128 chr2L 18090679 intergenic CG15153 - chr2L 18090743 3` UTR CG15153 - chr2L 18090807 3` UTR CG15153 - chr2L_7_18090001 chr2L_18090001 RAL-513 474 chr2L 18130442 18130493 chr2L 18130553 18130576 9 106 2.0 2.5 2.2 2.8 134 chr2L 18130442 3` UTR kel - chr2L 18130509 3` UTR kel - chr2L 18130576 3` UTR kel - chr2L_9_18130001 chr2L_18130001 RAL-513 475 chr2L 18184983 18185000 chr2L 18185121 18185137 4 138 2.5 3.0 2.8 1.1 154 chr2L 18184983 intron,5` UTR CG42750 -,CG7180 - chr2L 18185060 intron CG42750 - chr2L 18185137 intron CG42750 - chr2L_4_18185001 chr2L_18185001 RAL-513 476 chr2L 18221611 18221653 chr2L 18221708 18221750 4 93 2.5 5.0 3.8 0.8 139 chr2L 18221611 intron CG42750 - chr2L 18221680 intron CG42750 - chr2L 18221750 intron CG42750 - chr2L_4_18220001 chr2L_18220001 RAL-513 477 chr2L 18239940 18239988 chr2L 18240043 18240091 5 99 3.5 0.0 1.8 1.8 151 chr2L 18239940 intron CG42750 - chr2L 18240016 intron CG42750 - chr2L 18240091 intron CG42750 - chr2L_5_18240001 chr2L_18240001 RAL-513 478 chr2L 18243353 18243390 chr2L 18243449 18243486 8 95 5.5 4.0 4.8 1.4 133 chr2L 18243353 intron CG42750 - chr2L 18243420 intron CG42750 - chr2L 18243486 intron CG42750 - chr2L_8_18240001 chr2L_18240001 RAL-513 479 chr2L 18309464 18309514 chr2L 18309630 18309650 4 158 1.5 1.0 1.2 1.8 186 chr2L 18309464 intergenic CG43354 -,CR44694 + chr2L 18309557 intergenic CR44694 +,CG43354 - chr2L 18309650 5` UTR CR44694 + chr2L_4_18305001 chr2L_18305001 RAL-513 480 chr2L 18315235 18315282 chr2L 18315334 18315380 10 92 1.5 3.0 2.2 3.1 145 chr2L 18315235 intergenic not near genes chr2L 18315308 intergenic not near genes chr2L 18315380 intergenic not near genes chr2L_10_18315001 chr2L_18315001 RAL-513 481 chr2L 18393962 18394010 chr2L 18394062 18394110 6 100 2.5 2.5 2.5 1.7 148 chr2L 18393962 intergenic not near genes chr2L 18394036 intergenic not near genes chr2L 18394110 intergenic not near genes chr2L_6_18390001 chr2L_18390001 RAL-513 482 chr2L 18398404 18398433 chr2L 18398502 18398517 4 94 0.5 2.0 1.2 1.8 113 chr2L 18398404 intergenic not near genes chr2L 18398460 intergenic not near genes chr2L 18398517 intergenic not near genes chr2L_4_18395001 chr2L_18395001 RAL-513 483 chr2L 18408012 18408031 chr2L 18412814 18412835 Doc 6 4800 8.0 0.0 4.0 1.2 4823 chr2L 18408012 intergenic not near genes chr2L 18410424 intergenic not near genes chr2L 18412835 intergenic not near genes chr2L_6_18410001 chr2L_18410001 RAL-513 484 chr2L 18462342 18462381 chr2L 18462472 18462536 4 136 0.5 0.0 0.2 3.3 194 chr2L 18462342 intron let-7-C + chr2L 18462439 intron let-7-C + chr2L 18462536 intron let-7-C + chr2L_4_18460001 chr2L_18460001 RAL-513 485 chr2L 18573636 18573674 chr2L 18573938 18573977 13 306 22.5 29.0 25.8 0.5 341 chr2L 18573636 intron Pde11 - chr2L 18573806 intron Pde11 - chr2L 18573977 intron Pde11 - chr2L_13_18570001 chr2L_18570001 RAL-513 486 chr2L 18584756 18584778 chr2L 18584858 18584883 5 104 1.0 7.0 4.0 1.0 127 chr2L 18584756 intron Pde11 - chr2L 18584820 intron Pde11 - chr2L 18584883 intron Pde11 - chr2L_5_18580001 chr2L_18580001 RAL-513 487 chr2L 18587796 18587807 chr2L 18587929 18587949 7 137 1.5 0.5 1.0 3.5 153 chr2L 18587796 intron Pde11 - chr2L 18587872 intron Pde11 - chr2L 18587949 intron Pde11 - chr2L_7_18585001 chr2L_18585001 RAL-513 488 chr2L 18653984 18654025 chr2L 18654153 18654197 11 166 5.0 5.5 5.2 1.8 213 chr2L 18653984 intron MESR3 + chr2L 18654090 intron MESR3 + chr2L 18654197 intron MESR3 + chr2L_11_18650001 chr2L_18650001 RAL-513 489 chr2L 18671979 18672023 chr2L 18672082 18672122 9 97 4.5 6.0 5.2 1.5 143 chr2L 18671979 exon CG43339 - chr2L 18672050 exon CG43339 - chr2L 18672122 exon CG43339 - chr2L_9_18670001 chr2L_18670001 RAL-513 490 chr2L 18816724 18816768 chr2L 18816874 18816889 18 145 3.5 5.5 4.5 3.3 165 chr2L 18816724 intergenic not near genes chr2L 18816806 intergenic not near genes chr2L 18816889 intergenic not near genes chr2L_18_18815001 chr2L_18815001 RAL-513 491 chr2L 18883835 18883853 chr2L 18883934 18883951 10 101 10.0 5.0 7.5 1.2 116 chr2L 18883835 intergenic not near genes chr2L 18883893 intergenic not near genes chr2L 18883951 intergenic not near genes chr2L_10_18880001 chr2L_18880001 RAL-513 492 chr2L 18883859 18883884 chr2L 18883933 18883985 9 92 5.5 5.0 5.2 1.5 126 chr2L 18883859 intergenic not near genes chr2L 18883922 intergenic not near genes chr2L 18883985 intergenic not near genes chr2L_9_18880001 chr2L_18880001 RAL-513 493 chr2L 18902606 18902655 chr2L 18902907 18902956 17 297 1.5 4.0 2.8 4.5 350 chr2L 18902606 intergenic not near genes chr2L 18902781 intergenic not near genes chr2L 18902956 intergenic not near genes chr2L_17_18900001 chr2L_18900001 RAL-513 494 chr2L 18981734 18981763 chr2L 18981831 18981851 7 93 7.5 5.5 6.5 0.9 117 chr2L 18981734 intron Swip-1 - chr2L 18981792 intron Swip-1 - chr2L 18981851 intron Swip-1 - chr2L_7_18980001 chr2L_18980001 RAL-513 495 chr2L 18981765 18981783 chr2L 18981828 18981851 5 83 4.5 5.0 4.8 0.9 86 chr2L 18981765 intron Swip-1 - chr2L 18981808 intron Swip-1 - chr2L 18981851 intron Swip-1 - chr2L_5_18980001 chr2L_18980001 RAL-513 496 chr2L 19016232 19016269 chr2L 19016341 19016374 5 113 3.5 2.0 2.8 1.3 142 chr2L 19016232 intergenic not near genes chr2L 19016303 intergenic not near genes chr2L 19016374 intergenic not near genes chr2L_5_19015001 chr2L_19015001 RAL-513 497 chr2L 19024096 19024097 chr2L 21768291 21768291 6 2744194 9.5 18.0 13.8 0.4 2744195 chr2L 19024096 3` UTR CR43700 - chr2L 20396194 intron CG10947 - chr2L 21768291 intron CG31612 - chr2L_6_20395001 chr2L_20395001 RAL-513 498 chr2L 19035912 19035942 chr2L 19036019 19036025 4 101 5.0 6.0 5.5 0.6 113 chr2L 19035912 intron mib2 + chr2L 19035968 intron mib2 + chr2L 19036025 intron mib2 + chr2L_4_19035001 chr2L_19035001 RAL-513 499 chr2L 19147356 19147402 chr2L 19154409 19154440 297 16 7045 4.5 7.0 5.8 2.4 7084 chr2L 19147356 intron brat + chr2L 19150898 intron brat + chr2L 19154440 intron brat + chr2L_16_19150001 chr2L_19150001 RAL-513 500 chr2L 19237287 19237338 chr2L 19237405 19237458 10 113 4.5 4.0 4.2 1.9 171 chr2L 19237287 intergenic not near genes chr2L 19237372 intergenic not near genes chr2L 19237458 intergenic not near genes chr2L_10_19235001 chr2L_19235001 RAL-513 501 chr2L 19345017 19345029 chr2L 19357234 19357258 blood 8 12226 5.5 4.5 5.0 1.3 12241 chr2L 19345017 intron dnt - chr2L 19351138 intron dnt - chr2L 19357258 intron dnt - chr2L_8_19350001 chr2L_19350001 RAL-513 502 chr2L 19345032 19345046 chr2L 19357231 19357243 blood 9 12216 3.0 4.0 3.5 2.0 12211 chr2L 19345032 intron dnt - chr2L 19351138 intron dnt - chr2L 19357243 intron dnt - chr2L_9_19350001 chr2L_19350001 RAL-513 503 chr2L 19357526 19357569 chr2L 19357636 19357679 17 107 5.0 9.5 7.2 2.1 153 chr2L 19357526 intron dnt - chr2L 19357602 intron dnt - chr2L 19357679 intron dnt - chr2L_17_19355001 chr2L_19355001 RAL-513 504 chr2L 19374481 19374508 chr2L 19374609 19374637 4 128 5.0 2.0 3.5 0.9 156 chr2L 19374481 intergenic not near genes chr2L 19374559 intergenic not near genes chr2L 19374637 intergenic not near genes chr2L_4_19370001 chr2L_19370001 RAL-513 505 chr2L 19405605 19405614 chr2L 19405715 19405724 4 108 6.5 0.5 3.5 0.9 119 chr2L 19405605 intron Pax - chr2L 19405664 intron Pax - chr2L 19405724 intron Pax - chr2L_4_19405001 chr2L_19405001 RAL-513 506 chr2L 19407708 19407737 chr2L 19407915 19407953 11 209 6.0 4.0 5.0 1.8 245 chr2L 19407708 intron Pax - chr2L 19407830 intron Pax - chr2L 19407953 intron Pax - chr2L_11_19405001 chr2L_19405001 RAL-513 507 chr2L 19441045 19441089 chr2L 19441142 19441185 11 95 9.5 6.0 7.8 1.2 140 chr2L 19441045 intron CG10237 - chr2L 19441115 intron CG10237 - chr2L 19441185 5` UTR CG10237 - chr2L_11_19440001 chr2L_19440001 RAL-513 508 chr2L 19557817 19557852 chr2L 19557918 19557957 6 106 0.5 1.0 0.8 3.3 140 chr2L 19557817 intergenic Tep5 + chr2L 19557887 intergenic Tep5 + chr2L 19557957 intergenic Tep5 + chr2L_6_19555001 chr2L_19555001 RAL-513 509 chr2L 19558509 19558547 chr2L 19558633 19558670 11 123 2.0 6.0 4.0 2.2 161 chr2L 19558509 intron Tep5 + chr2L 19558590 intron Tep5 + chr2L 19558670 intron Tep5 + chr2L_11_19555001 chr2L_19555001 RAL-513 510 chr2L 19559984 19560035 chr2L 19560257 19560306 12 270 4.0 5.0 4.5 2.2 322 chr2L 19559984 exon Tep5 + chr2L 19560145 exon Tep5 + chr2L 19560306 intron Tep5 + chr2L_12_19560001 chr2L_19560001 RAL-513 511 chr2L 19560822 19560862 chr2L 19560918 19560919 15 94 5.0 0.0 2.5 4.3 97 chr2L 19560822 exon Tep5 + chr2L 19560870 intron Tep5 + chr2L 19560919 exon Tep5 + chr2L_15_19560001 chr2L_19560001 RAL-513 512 chr2L 19561343 19561367 chr2L 19561483 19561526 7 155 2.5 2.0 2.2 2.2 183 chr2L 19561343 exon Tep5 + chr2L 19561434 exon Tep5 + chr2L 19561526 exon Tep5 + chr2L_7_19560001 chr2L_19560001 RAL-513 513 chr2L 19601555 19601581 chr2L 19601652 19601677 9 94 5.0 3.0 4.0 1.8 122 chr2L 19601555 intron,intron Lar +,CR44978 - chr2L 19601616 intron,intron Lar +,CR44978 - chr2L 19601677 intron,intron Lar +,CR44978 - chr2L_9_19600001 chr2L_19600001 RAL-513 514 chr2L 19601586 19601600 chr2L 19601650 19601695 7 86 2.5 2.5 2.5 2.0 109 chr2L 19601586 intron,intron Lar +,CR44978 - chr2L 19601640 intron,intron Lar +,CR44978 - chr2L 19601695 intron,intron Lar +,CR44978 - chr2L_7_19600001 chr2L_19600001 RAL-513 515 chr2L 19620081 19620120 chr2L 19621086 19621128 jockey 6 1001 4.5 4.5 4.5 1.1 1047 chr2L 19620081 intron Lar + chr2L 19620604 intron Lar + chr2L 19621128 intron Lar + chr2L_6_19620001 chr2L_19620001 RAL-513 516 chr2L 19652555 19652602 chr2L 19674009 19674055 opus 16 21448 3.0 3.0 3.0 4.0 21500 chr2L 19652555 intron Lar + chr2L 19663305 intron Lar + chr2L 19674055 intron Lar + chr2L_16_19660001 chr2L_19660001 RAL-513 517 chr2L 19689038 19689088 chr2L 19689162 19689212 14 118 6.0 1.5 3.8 2.9 174 chr2L 19689038 intron Lar + chr2L 19689125 intron Lar + chr2L 19689212 intron Lar + chr2L_14_19685001 chr2L_19685001 RAL-513 518 chr2L 19697120 19697165 chr2L 19697228 19697278 14 107 4.0 4.0 4.0 2.8 158 chr2L 19697120 intron Lar + chr2L 19697199 intron Lar + chr2L 19697278 intron Lar + chr2L_14_19695001 chr2L_19695001 RAL-513 519 chr2L 19703520 19703548 chr2L 19712676 19712703 roo 10 9155 8.0 0.5 4.2 1.9 9183 chr2L 19703520 intron Lar + chr2L 19708112 intron Lar + chr2L 19712703 intron Lar + chr2L_10_19705001 chr2L_19705001 RAL-513 520 chr2L 19703559 19703568 chr2L 19712674 19712702 roo 5 9135 3.0 0.5 1.8 1.8 9143 chr2L 19703559 intron Lar + chr2L 19708130 intron Lar + chr2L 19712702 intron Lar + chr2L_5_19705001 chr2L_19705001 RAL-513 521 chr2L 19712686 19712721 chr2L 19712771 19712807 8 78 1.0 5.0 3.0 2.0 121 chr2L 19712686 intron Lar + chr2L 19712746 intron Lar + chr2L 19712807 intron Lar + chr2L_8_19710001 chr2L_19710001 RAL-513 522 chr2L 19737364 19737388 chr2L 19740829 19740861 1360 7 3476 3.5 3.5 3.5 1.6 3497 chr2L 19737364 intergenic Nf-YB + chr2L 19739112 intergenic not near genes chr2L 19740861 intergenic not near genes chr2L_7_19735001 chr2L_19735001 RAL-513 523 chr2L 19762803 19762840 chr2L 19763051 19763093 pogo 11 258 1.5 2.0 1.8 3.9 290 chr2L 19762803 5` UTR fbp - chr2L 19762948 intron fbp - chr2L 19763093 intron fbp - chr2L_11_19760001 chr2L_19760001 RAL-513 524 chr2L 19773146 19773190 chr2L 19773253 19773285 10 104 2.0 4.0 3.0 2.5 139 chr2L 19773146 intergenic not near genes chr2L 19773216 intergenic not near genes chr2L 19773285 intergenic not near genes chr2L_10_19770001 chr2L_19770001 RAL-513 525 chr2L 19824404 19824432 chr2L 19824506 19824535 5 102 4.0 4.0 4.0 1.0 131 chr2L 19824404 intron sick + chr2L 19824470 intron sick + chr2L 19824535 intron sick + chr2L_5_19820001 chr2L_19820001 RAL-513 526 chr2L 19935224 19935261 chr2L 19935320 19935330 5 91 4.5 5.0 4.8 0.9 106 chr2L 19935224 intron sick + chr2L 19935277 intron sick + chr2L 19935330 intron sick + chr2L_5_19935001 chr2L_19935001 RAL-513 527 chr2L 20000029 20000058 chr2L 20000138 20000148 5 105 4.5 3.0 3.8 1.0 119 chr2L 20000029 intron CG43861 - chr2L 20000088 intron CG43861 - chr2L 20000148 intron,3` UTR CG43861 -,CR44908 - chr2L_5_20000001 chr2L_20000001 RAL-513 528 chr2L 20005854 20005904 chr2L 20010950 20010994 flea 8 5095 3.0 4.5 3.8 1.7 5140 chr2L 20005854 intron CG43861 - chr2L 20008424 intron CG43861 - chr2L 20010994 intron CG43861 - chr2L_8_20005001 chr2L_20005001 RAL-513 529 chr2L 20022069 20022103 chr2L 20022202 20022207 10 128 2.5 3.5 3.0 2.5 138 chr2L 20022069 intergenic not near genes chr2L 20022138 intergenic not near genes chr2L 20022207 intergenic not near genes chr2L_10_20020001 chr2L_20020001 RAL-513 530 chr2L 20057033 20057071 chr2L 20057129 20057139 5 82 4.5 2.5 3.5 1.1 106 chr2L 20057033 intergenic not near genes chr2L 20057086 intergenic not near genes chr2L 20057139 intergenic not near genes chr2L_5_20055001 chr2L_20055001 RAL-513 531 chr2L 20124316 20124350 chr2L 20124414 20124448 5 95 2.5 3.5 3.0 1.2 132 chr2L 20124316 intergenic not near genes chr2L 20124382 intergenic not near genes chr2L 20124448 intergenic not near genes chr2L_5_20120001 chr2L_20120001 RAL-513 532 chr2L 20272095 20272143 chr2L 20282826 20282869 copia 18 10725 6.5 7.0 6.8 2.3 10774 chr2L 20272095 intergenic not near genes chr2L 20277482 intergenic not near genes chr2L 20282869 intergenic not near genes chr2L_18_20275001 chr2L_20275001 RAL-513 533 chr2L 20296488 20296541 chr2L 20296589 20296642 12 97 0.5 3.0 1.8 4.3 154 chr2L 20296488 intergenic CR43414 - chr2L 20296565 intergenic CR43414 - chr2L 20296642 3` UTR CR43414 - chr2L_12_20295001 chr2L_20295001 RAL-513 534 chr2L 20298806 20298853 chr2L 20298909 20298943 12 100 3.5 3.5 3.5 2.7 137 chr2L 20298806 intergenic not near genes chr2L 20298874 intergenic not near genes chr2L 20298943 intergenic not near genes chr2L_12_20295001 chr2L_20295001 RAL-513 535 chr2L 20303159 20303187 chr2L 20310641 20310654 blood 10 7482 0.5 7.5 4.0 2.0 7495 chr2L 20303159 intergenic not near genes chr2L 20306906 intergenic not near genes chr2L 20310654 intergenic not near genes chr2L_10_20305001 chr2L_20305001 RAL-513 536 chr2L 20310884 20310916 chr2L 20310965 20311014 4 90 0.0 5.5 2.8 1.1 130 chr2L 20310884 intergenic spir + chr2L 20310949 intergenic spir + chr2L 20311014 intergenic spir + chr2L_4_20310001 chr2L_20310001 RAL-513 537 chr2L 20320022 20320061 chr2L 20320145 20320199 6 128 7.5 0.0 3.8 1.2 177 chr2L 20320022 intron spir + chr2L 20320110 intron spir + chr2L 20320199 intron spir + chr2L_6_20320001 chr2L_20320001 RAL-513 538 chr2L 20367543 20367580 chr2L 20367689 20367714 9 145 5.5 5.5 5.5 1.4 171 chr2L 20367543 intergenic not near genes chr2L 20367628 intergenic not near genes chr2L 20367714 intergenic not near genes chr2L_9_20365001 chr2L_20365001 RAL-513 539 chr2L 20372200 20372213 chr2L 20372470 20372472 pogo 4 267 6.5 6.5 6.5 0.5 272 chr2L 20372200 intergenic Ugt37a1 - chr2L 20372336 intergenic Ugt37a1 - chr2L 20372472 3` UTR Ugt37a1 - chr2L_4_20370001 chr2L_20370001 RAL-513 540 chr2L 20372842 20372861 chr2L 20372937 20372950 4 95 6.5 3.0 4.8 0.7 108 chr2L 20372842 exon Ugt37a1 - chr2L 20372896 exon Ugt37a1 - chr2L 20372950 exon Ugt37a1 - chr2L_4_20370001 chr2L_20370001 RAL-513 541 chr2L 20372864 20372878 chr2L 20372929 20372962 6 86 4.0 1.5 2.8 1.6 98 chr2L 20372864 exon Ugt37a1 - chr2L 20372913 exon Ugt37a1 - chr2L 20372962 exon Ugt37a1 - chr2L_6_20370001 chr2L_20370001 RAL-513 542 chr2L 20498673 20498703 chr2L 20498788 20498820 10 112 3.5 5.0 4.2 1.9 147 chr2L 20498673 intergenic not near genes chr2L 20498746 intergenic not near genes chr2L 20498820 intergenic not near genes chr2L_10_20495001 chr2L_20495001 RAL-513 543 chr2L 20500395 20500444 chr2L 20500495 20500543 13 96 6.0 4.5 5.2 2.1 148 chr2L 20500395 intergenic not near genes chr2L 20500469 intergenic not near genes chr2L 20500543 intergenic not near genes chr2L_13_20500001 chr2L_20500001 RAL-513 544 chr2L 20568651 20568684 chr2L 20569061 20569087 X-element 7 403 3.5 8.0 5.8 1.0 436 chr2L 20568651 intron CR45347 + chr2L 20568869 intron CR45347 + chr2L 20569087 intron CR45347 + chr2L_7_20565001 chr2L_20565001 RAL-513 545 chr2L 20576202 20576252 chr2L 20583686 20583715 blood 15 7479 6.5 4.0 5.2 2.4 7513 chr2L 20576202 intergenic CR45347 + chr2L 20579958 intergenic not near genes chr2L 20583715 3` UTR CR44909 - chr2L_15_20575001 chr2L_20575001 RAL-513 546 chr2L 20601766 20601811 chr2L 20601864 20601909 11 96 3.5 1.5 2.5 3.1 143 chr2L 20601766 intron CR44909 - chr2L 20601838 intron CR44909 - chr2L 20601909 intron CR44909 - chr2L_11_20600001 chr2L_20600001 RAL-513 547 chr2L 20602713 20602743 chr2L 20602821 20602851 10 108 1.5 3.0 2.2 3.1 138 chr2L 20602713 intron CR44909 - chr2L 20602782 intron CR44909 - chr2L 20602851 intron CR44909 - chr2L_10_20600001 chr2L_20600001 RAL-513 548 chr2L 20643322 20643338 chr2L 20643474 20643490 4 151 4.5 3.5 4.0 0.8 168 chr2L 20643322 intergenic phr6-4 -,CG17470 - chr2L 20643406 3` UTR phr6-4 - chr2L 20643490 3` UTR phr6-4 - chr2L_4_20640001 chr2L_20640001 RAL-513 549 chr2L 20674810 20674864 chr2L 20674915 20674962 9 99 7.0 0.5 3.8 1.9 152 chr2L 20674810 intron CG31678 - chr2L 20674886 intron CG31678 - chr2L 20674962 intron CG31678 - chr2L_9_20670001 chr2L_20670001 RAL-513 550 chr2L 20778218 20778254 chr2L 20778318 20778356 12 98 3.5 6.0 4.8 2.1 138 chr2L 20778218 intron cad + chr2L 20778287 intron cad + chr2L 20778356 intron cad + chr2L_12_20775001 chr2L_20775001 RAL-513 551 chr2L 20778256 20778265 chr2L 20778317 20778368 6 88 1.0 6.0 3.5 1.3 112 chr2L 20778256 intron cad + chr2L 20778312 intron cad + chr2L 20778368 intron cad + chr2L_6_20775001 chr2L_20775001 RAL-513 552 chr2L 20818495 20818541 chr2L 20818591 20818643 13 95 6.0 6.0 6.0 1.9 148 chr2L 20818495 exon CheB38a - chr2L 20818569 intergenic CheB38a - chr2L 20818643 intergenic CheB38a - chr2L_13_20815001 chr2L_20815001 RAL-513 553 chr2L 20840010 20840055 chr2L 20840241 20840287 12 228 2.0 3.0 2.5 3.4 277 chr2L 20840010 intergenic not near genes chr2L 20840148 intergenic not near genes chr2L 20840287 intergenic CG31676 + chr2L_12_20840001 chr2L_20840001 RAL-513 554 chr2L 20891521 20891545 chr2L 20896642 20896664 jockey 9 5119 3.0 5.5 4.2 1.7 5143 chr2L 20891521 intron,intron CG43739 -,sky - chr2L 20894092 intron,intron CG43739 -,sky - chr2L 20896664 intron,intron CG43739 -,sky - chr2L_9_20890001 chr2L_20890001 RAL-513 555 chr2L 20906803 20906850 chr2L 20907006 20907022 12 193 6.0 3.0 4.5 2.2 219 chr2L 20906803 intron,intron CG43739 -,sky - chr2L 20906912 intron,intron CG43739 -,sky - chr2L 20907022 intron,intron CG43739 -,sky - chr2L_12_20905001 chr2L_20905001 RAL-513 556 chr2L 20946924 20946960 chr2L 20947031 20947036 14 103 5.0 4.0 4.5 2.5 112 chr2L 20946924 intergenic CR44606 - chr2L 20946980 intergenic CR44606 - chr2L 20947036 intergenic CR44606 - chr2L_14_20945001 chr2L_20945001 RAL-513 557 chr2L 20967063 20967107 chr2L 20967168 20967198 8 104 4.0 3.0 3.5 1.8 135 chr2L 20967063 3` UTR CG42238 - chr2L 20967130 3` UTR CG42238 - chr2L 20967198 3` UTR CG42238 - chr2L_8_20965001 chr2L_20965001 RAL-513 558 chr2L 20976637 20976678 chr2L 20981472 20981483 X-element 21 4829 3.5 3.5 3.5 4.7 4846 chr2L 20976637 intron CG42238 - chr2L 20979060 intron CG42238 - chr2L 20981483 intron CG42238 - chr2L_21_20975001 chr2L_20975001 RAL-513 559 chr2L 20984719 20984734 chr2L 20984831 20984845 5 111 10.5 6.5 8.5 0.5 126 chr2L 20984719 intron CG42238 - chr2L 20984782 intron CG42238 - chr2L 20984845 intron CG42238 - chr2L_5_20980001 chr2L_20980001 RAL-513 560 chr2L 20984739 20984768 chr2L 20984829 20984872 7 102 5.0 6.0 5.5 1.1 133 chr2L 20984739 intron CG42238 - chr2L 20984806 intron CG42238 - chr2L 20984872 intron CG42238 - chr2L_7_20980001 chr2L_20980001 RAL-513 561 chr2L 20986884 20986931 chr2L 20987241 20987288 16 354 3.5 4.0 3.8 3.3 404 chr2L 20986884 intron CG42238 - chr2L 20987086 intron CG42238 - chr2L 20987288 intron CG42238 - chr2L_16_20985001 chr2L_20985001 RAL-513 562 chr2L 20991028 20991041 chr2L 20991126 20991138 7 97 8.5 6.5 7.5 0.8 110 chr2L 20991028 intron CG42238 - chr2L 20991083 intron CG42238 - chr2L 20991138 intron CG42238 - chr2L_7_20990001 chr2L_20990001 RAL-513 563 chr2L 20991044 20991068 chr2L 20991123 20991165 8 87 4.5 6.5 5.5 1.2 121 chr2L 20991044 intron CG42238 - chr2L 20991104 intron CG42238 - chr2L 20991165 intron CG42238 - chr2L_8_20990001 chr2L_20990001 RAL-513 564 chr2L 21020256 21020307 chr2L 21023953 21023996 NOF 5 3687 4.0 4.5 4.2 1.0 3740 chr2L 21020256 intron CG42238 - chr2L 21022126 intron CG42238 - chr2L 21023996 intron CG42238 - chr2L_5_21020001 chr2L_21020001 RAL-513 565 chr2L 21041122 21041166 chr2L 21049402 21049430 Tirant 12 8277 6.0 4.0 5.0 2.0 8308 chr2L 21041122 intron CG42238 - chr2L 21045276 intron CG42238 - chr2L 21049430 intron CG42238 - chr2L_12_21045001 chr2L_21045001 RAL-513 566 chr2L 21074906 21074946 chr2L 21075016 21075057 11 102 1.5 2.0 1.8 3.9 151 chr2L 21074906 intergenic tadr + chr2L 21074982 intergenic tadr + chr2L 21075057 intergenic tadr + chr2L_11_21070001 chr2L_21070001 RAL-513 567 chr2L 21113673 21113693 chr2L 21113785 21113806 5 112 8.5 5.5 7.0 0.6 133 chr2L 21113673 intron Nhe2 + chr2L 21113740 intron Nhe2 + chr2L 21113806 intron Nhe2 + chr2L_5_21110001 chr2L_21110001 RAL-513 568 chr2L 21113694 21113718 chr2L 21113779 21113831 14 106 3.0 5.0 4.0 2.8 137 chr2L 21113694 intron Nhe2 + chr2L 21113762 intron Nhe2 + chr2L 21113831 intron Nhe2 + chr2L_14_21110001 chr2L_21110001 RAL-513 569 chr2L 21286585 21286624 chr2L 21286683 21286722 11 93 5.0 2.0 3.5 2.4 137 chr2L 21286585 exon Mio - chr2L 21286654 intron Mio - chr2L 21286722 intron Mio - chr2L_11_21285001 chr2L_21285001 RAL-513 570 chr2L 21769961 21769967 chr2L 21770038 21770066 4 93 5.5 2.0 3.8 0.8 105 chr2L 21769961 intron CG31612 - chr2L 21770014 intron CG31612 - chr2L 21770066 intron CG31612 - chr2L_4_21770001 chr2L_21770001 RAL-513 571 chr2L 21825218 21825244 chr2L 21825303 21825344 6 101 6.5 2.0 4.2 1.2 126 chr2L 21825218 intergenic not near genes chr2L 21825281 intergenic not near genes chr2L 21825344 intergenic not near genes chr2L_6_21825001 chr2L_21825001 RAL-513 572 chr2L 21836399 21836407 chr2L 21836491 21836494 4 100 8.0 5.0 6.5 0.5 95 chr2L 21836399 3` UTR tsh + chr2L 21836446 3` UTR tsh + chr2L 21836494 3` UTR tsh + chr2L_4_21835001 chr2L_21835001 RAL-513 573 chr2L 21981665 21981710 chr2L 21990850 21990868 roo 10 9181 4.5 8.5 6.5 1.3 9203 chr2L 21981665 exon CG2528 - chr2L 21986266 intron CG2528 - chr2L 21990868 exon CG2528 - chr2L_10_21985001 chr2L_21985001 RAL-513 574 chr2L 22037354 22037390 chr2L 22037676 22037712 INE-1 8 321 4.0 1.0 2.5 2.3 358 chr2L 22037354 intergenic not near genes chr2L 22037533 intergenic CG41434 + chr2L 22037712 intergenic CG41434 + chr2L_8_22035001 chr2L_22035001 RAL-513 575 chr2L 22581950 22582000 chr2L 22583759 22583797 S-element 10 1803 1.5 4.0 2.8 2.6 1847 chr2L 22581950 intron CG17494 + chr2L 22582874 intron CG17494 + chr2L 22583797 intron CG17494 + chr2L_10_22580001 chr2L_22580001 RAL-513 576 chr2L 22776411 22776442 chr2L 22778220 22778251 S-element 4 1809 3.5 2.0 2.8 1.1 1840 chr2L 22776411 intergenic not near genes chr2L 22777331 intergenic not near genes chr2L 22778251 intergenic not near genes chr2L_4_22775001 chr2L_22775001 RAL-513 577 chr2L 22997012 22997040 chr2L 22997398 22997426 4 384 3.5 2.5 3.0 1.0 414 chr2L 22997012 intergenic not near genes chr2L 22997219 intergenic not near genes chr2L 22997426 intergenic not near genes chr2L_4_22995001 chr2L_22995001 RAL-513 578 chr2L 23233888 23233929 chr2L 23233986 23234028 4 91 23.5 20.0 21.8 0.2 140 chr2L 23233888 intergenic not near genes chr2L 23233958 intergenic not near genes chr2L 23234028 intergenic not near genes chr2L_4_23230001 chr2L_23230001 RAL-513 579 chr2R 469955 469978 chr2R 473216 473216 F-element 7 3257 4.0 4.0 4.0 1.4 3261 chr2R 469955 intergenic not near genes chr2R 471586 intergenic not near genes chr2R 473216 intergenic not near genes chr2R_7_470001 chr2R_470001 RAL-513 580 chr2R 529342 529353 chr2R 537968 537977 Max-element 4 8632 2.0 4.5 3.2 1.0 8635 chr2R 529342 intron CG40378 + chr2R 533660 intron CG40378 + chr2R 537977 intron CG40378 + chr2R_4_530001 chr2R_530001 RAL-513 581 chr2R 576711 576723 chr2R 576801 576819 7 94 2.5 3.5 3.0 1.8 108 chr2R 576711 intron CG40378 + chr2R 576765 intron CG40378 + chr2R 576819 intron CG40378 + chr2R_7_575001 chr2R_575001 RAL-513 582 chr2R 672932 672983 chr2R 673029 673051 5 87 1.5 3.0 2.2 1.6 119 chr2R 672932 intergenic not near genes chr2R 672992 intergenic not near genes chr2R 673051 intergenic not near genes chr2R_5_670001 chr2R_670001 RAL-513 583 chr2R 952417 952455 chr2R 952559 952568 5 136 3.5 2.5 3.0 1.2 151 chr2R 952417 intergenic not near genes chr2R 952492 intergenic not near genes chr2R 952568 intergenic not near genes chr2R_5_950001 chr2R_950001 RAL-513 584 chr2R 1082369 1082384 chr2R 1087130 1087177 Doc 5 4772 1.0 3.0 2.0 1.7 4808 chr2R 1082369 intron rl + chr2R 1084773 intron rl + chr2R 1087177 intron rl + chr2R_5_1080001 chr2R_1080001 RAL-513 585 chr2R 1365845 1365894 chr2R 1365973 1366026 12 128 5.0 3.5 4.2 2.3 181 chr2R 1365845 intron l(2)41Ab + chr2R 1365936 intron l(2)41Ab + chr2R 1366026 intron l(2)41Ab + chr2R_12_1365001 chr2R_1365001 RAL-513 586 chr2R 1516586 1516601 chr2R 1521334 1521349 1731 5 4748 11.5 4.5 8.0 0.6 4763 chr2R 1516586 exon Maf1 - chr2R 1518968 intron Maf1 - chr2R 1521349 5` UTR Maf1 - chr2R_5_1515001 chr2R_1515001 RAL-513 587 chr2R 1600554 1600580 chr2R 1600956 1600992 10 411 21.0 20.0 20.5 0.5 438 chr2R 1600554 intergenic not near genes chr2R 1600773 intergenic not near genes chr2R 1600992 intergenic not near genes chr2R_10_1600001 chr2R_1600001 RAL-513 588 chr2R 1685458 1685498 chr2R 1685566 1685606 11 106 1.5 2.5 2.0 3.7 148 chr2R 1685458 intron CG41520 + chr2R 1685532 intron CG41520 + chr2R 1685606 intron CG41520 + chr2R_11_1685001 chr2R_1685001 RAL-513 589 chr2R 2015115 2015161 chr2R 2015212 2015239 7 93 2.5 3.0 2.8 1.8 124 chr2R 2015115 intron CG17684 - chr2R 2015177 intron CG17684 - chr2R 2015239 intron CG17684 - chr2R_7_2015001 chr2R_2015001 RAL-513 590 chr2R 2047739 2047771 chr2R 2047989 2048021 4 250 3.5 0.5 2.0 1.3 282 chr2R 2047739 intron CG17684 - chr2R 2047880 intron CG17684 - chr2R 2048021 intron CG17684 - chr2R_4_2045001 chr2R_2045001 RAL-513 591 chr2R 2498966 2499018 chr2R 2508132 2508152 roo 10 9161 4.0 6.0 5.0 1.7 9186 chr2R 2498966 intron MFS17 - chr2R 2503559 intron MFS17 - chr2R 2508152 intron MFS17 - chr2R_10_2500001 chr2R_2500001 RAL-513 592 chr2R 2508287 2508339 chr2R 2508445 2508489 13 155 3.0 5.5 4.2 2.5 202 chr2R 2508287 intron MFS17 - chr2R 2508388 intron MFS17 - chr2R 2508489 intron MFS17 - chr2R_13_2505001 chr2R_2505001 RAL-513 593 chr2R 2942275 2942295 chr2R 2942396 2942417 8 121 5.0 4.5 4.8 1.4 142 chr2R 2942275 intron Scp1 - chr2R 2942346 intron Scp1 - chr2R 2942417 intron Scp1 - chr2R_8_2940001 chr2R_2940001 RAL-513 594 chr2R 2942296 2942321 chr2R 2942392 2942419 9 117 2.0 4.0 3.0 2.2 123 chr2R 2942296 intron Scp1 - chr2R 2942358 intron Scp1 - chr2R 2942419 intron Scp1 - chr2R_9_2940001 chr2R_2940001 RAL-513 595 chr2R 2950418 2950465 chr2R 2950560 2950606 8 138 2.0 3.5 2.8 2.1 188 chr2R 2950418 intron Scp1 - chr2R 2950512 intron Scp1 - chr2R 2950606 intron Scp1 - chr2R_8_2950001 chr2R_2950001 RAL-513 596 chr2R 3291843 3292102 chr2R 3915027 3915282 6 623184 11.5 24.5 18.0 0.3 623439 chr2R 3291843 intergenic not near genes chr2R 3603562 intergenic not near genes chr2R 3915282 intron uex - chr2R_6_3600001 chr2R_3600001 RAL-513 597 chr2R 3293726 3293761 chr2R 3293824 3293844 6 94 2.0 2.0 2.0 2.0 118 chr2R 3293726 intergenic not near genes chr2R 3293785 intergenic not near genes chr2R 3293844 intergenic not near genes chr2R_6_3290001 chr2R_3290001 RAL-513 598 chr2R 3399212 3399257 chr2R 3399317 3399349 8 98 1.5 3.5 2.5 2.3 137 chr2R 3399212 intergenic not near genes chr2R 3399280 intergenic not near genes chr2R 3399349 intergenic not near genes chr2R_8_3395001 chr2R_3395001 RAL-513 599 chr2R 3532614 3532642 chr2R 3536059 3536105 Doc 5 3459 0.5 2.0 1.2 2.3 3491 chr2R 3532614 intergenic not near genes chr2R 3534360 intergenic not near genes chr2R 3536105 intergenic not near genes chr2R_5_3530001 chr2R_3530001 RAL-513 600 chr2R 4138627 4138662 chr2R 4138724 4138759 9 96 6.0 6.5 6.2 1.2 132 chr2R 4138627 intergenic not near genes chr2R 4138693 intergenic not near genes chr2R 4138759 intergenic not near genes chr2R_9_4135001 chr2R_4135001 RAL-513 601 chr2R 4138664 4138674 chr2R 4138723 4138771 4 85 4.5 6.0 5.2 0.6 107 chr2R 4138664 intergenic not near genes chr2R 4138718 intergenic not near genes chr2R 4138771 intergenic not near genes chr2R_4_4135001 chr2R_4135001 RAL-513 602 chr2R 4312936 4312986 chr2R 4313040 4313090 12 98 1.0 3.0 2.0 4.0 154 chr2R 4312936 intergenic not near genes chr2R 4313013 intergenic not near genes chr2R 4313090 intergenic not near genes chr2R_12_4310001 chr2R_4310001 RAL-513 603 chr2R 4430367 4430400 chr2R 4430460 4430465 10 97 4.0 5.5 4.8 1.7 98 chr2R 4430367 intron Gprk1 - chr2R 4430416 intron Gprk1 - chr2R 4430465 intron Gprk1 - chr2R_10_4430001 chr2R_4430001 RAL-513 604 chr2R 4602958 4602994 chr2R 4603058 4603086 8 100 5.5 6.5 6.0 1.1 128 chr2R 4602958 intron p120ctn + chr2R 4603022 intron p120ctn + chr2R 4603086 intron p120ctn + chr2R_8_4600001 chr2R_4600001 RAL-513 605 chr2R 4622962 4622986 chr2R 4624112 4624137 1360 8 1165 6.5 4.5 5.5 1.2 1175 chr2R 4622962 intergenic CR44101 - chr2R 4623550 intergenic not near genes chr2R 4624137 intergenic not near genes chr2R_8_4620001 chr2R_4620001 RAL-513 606 chr2R 4688103 4688126 chr2R 4688216 4688233 4 112 2.5 4.0 3.2 1.0 130 chr2R 4688103 intergenic not near genes chr2R 4688168 intergenic not near genes chr2R 4688233 intergenic not near genes chr2R_4_4685001 chr2R_4685001 RAL-513 607 chr2R 4704803 4704849 chr2R 4705135 4705182 16 326 4.5 5.0 4.8 2.8 379 chr2R 4704803 intron Nipped-B - chr2R 4704992 intron Nipped-B - chr2R 4705182 intron Nipped-B - chr2R_16_4700001 chr2R_4700001 RAL-513 608 chr2R 4746212 4746251 chr2R 4746858 4746892 11 644 6.5 3.5 5.0 1.8 680 chr2R 4746212 intron conu + chr2R 4746552 intron conu + chr2R 4746892 intron conu + chr2R_11_4745001 chr2R_4745001 RAL-513 609 chr2R 4838855 4838905 chr2R 4840398 4840447 transib2 8 1542 3.5 5.5 4.5 1.5 1592 chr2R 4838855 intergenic not near genes chr2R 4839651 intergenic not near genes chr2R 4840447 intergenic not near genes chr2R_8_4835001 chr2R_4835001 RAL-513 610 chr2R 4870726 4870742 chr2R 4871256 4871273 R1A1-element 7 530 5.0 4.5 4.8 1.2 547 chr2R 4870726 intergenic not near genes chr2R 4871000 intergenic not near genes chr2R 4871273 intergenic not near genes chr2R_7_4870001 chr2R_4870001 RAL-513 611 chr2R 4887599 4887648 chr2R 4887815 4887848 13 213 2.0 1.5 1.8 4.6 249 chr2R 4887599 intergenic not near genes chr2R 4887724 intergenic not near genes chr2R 4887848 intergenic not near genes chr2R_13_4885001 chr2R_4885001 RAL-513 612 chr2R 4888583 4888602 chr2R 4888690 4888709 5 107 5.0 2.0 3.5 1.1 126 chr2R 4888583 intergenic not near genes chr2R 4888646 intergenic not near genes chr2R 4888709 intergenic not near genes chr2R_5_4885001 chr2R_4885001 RAL-513 613 chr2R 4916078 4916119 chr2R 4916176 4916213 12 94 5.0 4.0 4.5 2.2 135 chr2R 4916078 intergenic not near genes chr2R 4916146 intergenic not near genes chr2R 4916213 intergenic not near genes chr2R_12_4915001 chr2R_4915001 RAL-513 614 chr2R 4933362 4933389 chr2R 4933923 4933954 6 566 2.0 1.0 1.5 2.4 592 chr2R 4933362 intron Ir41a + chr2R 4933658 intron Ir41a + chr2R 4933954 intron Ir41a + chr2R_6_4930001 chr2R_4930001 RAL-513 615 chr2R 4956998 4957043 chr2R 4957120 4957166 6 122 1.5 2.5 2.0 2.0 168 chr2R 4956998 intron Ir41a + chr2R 4957082 intron Ir41a + chr2R 4957166 intron Ir41a + chr2R_6_4955001 chr2R_4955001 RAL-513 616 chr2R 5059804 5059822 chr2R 5059902 5059906 5 94 7.0 5.5 6.2 0.7 102 chr2R 5059804 intergenic not near genes chr2R 5059855 intergenic not near genes chr2R 5059906 intergenic not near genes chr2R_5_5055001 chr2R_5055001 RAL-513 617 chr2R 5075930 5075971 chr2R 5076072 5076115 8 144 30.0 29.5 29.8 0.3 185 chr2R 5075930 intergenic not near genes chr2R 5076022 intergenic not near genes chr2R 5076115 intergenic not near genes chr2R_8_5075001 chr2R_5075001 RAL-513 618 chr2R 5125234 5125276 chr2R 5125570 5125614 6 336 2.5 4.5 3.5 1.3 380 chr2R 5125234 intron gus - chr2R 5125424 intron gus - chr2R 5125614 intron gus - chr2R_6_5125001 chr2R_5125001 RAL-513 619 chr2R 5209760 5209811 chr2R 5210313 5210364 11 550 2.5 3.5 3.0 2.8 604 chr2R 5209760 intron Nipped-A - chr2R 5210062 intron Nipped-A - chr2R 5210364 intron Nipped-A - chr2R_11_5210001 chr2R_5210001 RAL-513 620 chr2R 5237332 5237372 chr2R 5237432 5237455 7 95 1.5 0.0 0.8 3.9 123 chr2R 5237332 intron Nipped-A - chr2R 5237394 intron Nipped-A - chr2R 5237455 intron Nipped-A - chr2R_7_5235001 chr2R_5235001 RAL-513 621 chr2R 5356370 5356387 chr2R 5356438 5356460 7 85 2.5 4.0 3.2 1.7 90 chr2R 5356370 intergenic not near genes chr2R 5356415 intergenic not near genes chr2R 5356460 intergenic not near genes chr2R_7_5355001 chr2R_5355001 RAL-513 622 chr2R 5417975 5418021 chr2R 5420627 5420643 Burdock 6 2647 1.0 4.5 2.8 1.6 2668 chr2R 5417975 intron laccase2 + chr2R 5419309 intron laccase2 + chr2R 5420643 intron laccase2 + chr2R_6_5415001 chr2R_5415001 RAL-513 623 chr2R 5441873 5441914 chr2R 5441973 5442015 5 101 2.5 6.0 4.2 1.0 142 chr2R 5441873 intron laccase2 + chr2R 5441944 intron laccase2 + chr2R 5442015 intron laccase2 + chr2R_5_5440001 chr2R_5440001 RAL-513 624 chr2R 5472358 5472394 chr2R 5472480 5472494 5 109 4.5 5.0 4.8 0.9 136 chr2R 5472358 intron CG30440 - chr2R 5472426 intron CG30440 - chr2R 5472494 intron CG30440 - chr2R_5_5470001 chr2R_5470001 RAL-513 625 chr2R 5476339 5476385 chr2R 5476898 5476925 12 560 6.0 5.0 5.5 1.8 586 chr2R 5476339 intron CG30440 - chr2R 5476632 intron CG30440 - chr2R 5476925 intron CG30440 - chr2R_12_5475001 chr2R_5475001 RAL-513 626 chr2R 5581402 5581412 chr2R 5627631 5627640 5 46228 7.0 17.0 12.0 0.4 46238 chr2R 5581402 intergenic not near genes chr2R 5604521 intron Fis1 - chr2R 5627640 intergenic not near genes chr2R_5_5600001 chr2R_5600001 RAL-513 627 chr2R 5581416 5581422 chr2R 5627619 5627650 4 46220 4.0 16.0 10.0 0.4 46234 chr2R 5581416 intergenic not near genes chr2R 5604533 intron Fis1 - chr2R 5627650 intergenic not near genes chr2R_4_5600001 chr2R_5600001 RAL-513 628 chr2R 5621004 5621052 chr2R 5621163 5621210 13 143 5.0 2.5 3.8 2.7 206 chr2R 5621004 intergenic not near genes chr2R 5621107 intergenic not near genes chr2R 5621210 intergenic not near genes chr2R_13_5620001 chr2R_5620001 RAL-513 629 chr2R 5640031 5640045 chr2R 5640093 5640110 7 83 2.5 7.0 4.8 1.2 79 chr2R 5640031 intergenic not near genes chr2R 5640070 intergenic not near genes chr2R 5640110 intergenic not near genes chr2R_7_5640001 chr2R_5640001 RAL-513 630 chr2R 5640445 5640477 chr2R 5640557 5640586 11 107 4.0 3.5 3.8 2.3 141 chr2R 5640445 intergenic CG11665 - chr2R 5640516 intergenic CG11665 - chr2R 5640586 intergenic CG11665 - chr2R_11_5640001 chr2R_5640001 RAL-513 631 chr2R 5655404 5655422 chr2R 5655499 5655521 11 96 13.5 6.5 10.0 1.0 117 chr2R 5655404 exon CG1344 + chr2R 5655462 exon CG1344 + chr2R 5655521 exon CG1344 + chr2R_11_5655001 chr2R_5655001 RAL-513 632 chr2R 5655429 5655445 chr2R 5655498 5655543 8 92 6.5 6.5 6.5 1.1 114 chr2R 5655429 exon CG1344 + chr2R 5655486 exon CG1344 + chr2R 5655543 exon CG1344 + chr2R_8_5655001 chr2R_5655001 RAL-513 633 chr2R 5655856 5655905 chr2R 5655964 5656013 20 102 1.5 5.0 3.2 4.8 157 chr2R 5655856 3` UTR CG1344 + chr2R 5655934 3` UTR CG1344 + chr2R 5656013 3` UTR CG1344 + chr2R_20_5655001 chr2R_5655001 RAL-513 634 chr2R 5606758 5606814 chr2R 5736690 5736805 6 129970 10.0 17.0 13.5 0.4 130047 chr2R 5606758 intergenic not near genes chr2R 5671782 5` UTR kune + chr2R 5736805 intergenic not near genes chr2R_6_5670001 chr2R_5670001 RAL-513 635 chr2R 5772536 5772550 chr2R 5772611 5772641 4 91 2.0 4.5 3.2 1.0 105 chr2R 5772536 3` UTR Gp210 + chr2R 5772588 3` UTR Gp210 + chr2R 5772641 3` UTR Gp210 + chr2R_4_5770001 chr2R_5770001 RAL-513 636 chr2R 5790451 5790495 chr2R 5790555 5790600 4 105 1.5 0.5 1.0 2.0 149 chr2R 5790451 intergenic not near genes chr2R 5790526 intergenic not near genes chr2R 5790600 intergenic not near genes chr2R_4_5790001 chr2R_5790001 RAL-513 637 chr2R 5812149 5812168 chr2R 5812240 5812264 6 92 6.0 5.5 5.8 0.9 115 chr2R 5812149 intron dpr12 + chr2R 5812206 intron dpr12 + chr2R 5812264 intron dpr12 + chr2R_6_5810001 chr2R_5810001 RAL-513 638 chr2R 5852027 5852053 chr2R 5852135 5852157 6 113 2.0 3.0 2.5 1.7 130 chr2R 5852027 intron dpr12 + chr2R 5852092 intron dpr12 + chr2R 5852157 intron dpr12 + chr2R_6_5850001 chr2R_5850001 RAL-513 639 chr2R 5859974 5860002 chr2R 5860087 5860134 11 118 6.5 2.5 4.5 2.0 160 chr2R 5859974 3` UTR dpr12 + chr2R 5860054 3` UTR dpr12 + chr2R 5860134 3` UTR dpr12 + chr2R_11_5860001 chr2R_5860001 RAL-513 640 chr2R 5868057 5868089 chr2R 5868184 5868229 6 130 2.0 1.5 1.8 2.1 172 chr2R 5868057 intergenic not near genes chr2R 5868143 intergenic not near genes chr2R 5868229 intergenic not near genes chr2R_6_5865001 chr2R_5865001 RAL-513 641 chr2R 5869255 5869299 chr2R 5874351 5874372 flea 15 5090 5.5 4.0 4.8 2.6 5117 chr2R 5869255 intergenic not near genes chr2R 5871814 intergenic not near genes chr2R 5874372 intergenic not near genes chr2R_15_5870001 chr2R_5870001 RAL-513 642 chr2R 5885217 5885235 chr2R 5885320 5885337 7 102 6.0 2.5 4.2 1.3 120 chr2R 5885217 5` UTR CR44125 + chr2R 5885277 5` UTR CR44125 + chr2R 5885337 5` UTR CR44125 + chr2R_7_5885001 chr2R_5885001 RAL-513 643 chr2R 5885236 5885368 chr2R 5885318 5885516 13 128 3.5 2.5 3.0 3.2 280 chr2R 5885236 5` UTR CR44125 + chr2R 5885376 5` UTR CR44125 + chr2R 5885516 5` UTR CR44125 + chr2R_13_5885001 chr2R_5885001 RAL-513 644 chr2R 5902150 5902165 chr2R 5909728 5909744 17.6 4 7579 5.5 3.0 4.2 0.8 7594 chr2R 5902150 intron CG43366 + chr2R 5905947 intron CG43366 + chr2R 5909744 intron CG43366 + chr2R_4_5905001 chr2R_5905001 RAL-513 645 chr2R 5947050 5947074 chr2R 5947191 5947215 4 138 3.5 2.0 2.8 1.1 165 chr2R 5947050 intergenic not near genes chr2R 5947132 intergenic not near genes chr2R 5947215 intergenic not near genes chr2R_4_5945001 chr2R_5945001 RAL-513 646 chr2R 6016779 6016812 chr2R 6016883 6016906 4 101 1.0 4.5 2.8 1.1 127 chr2R 6016779 intergenic not near genes chr2R 6016842 intergenic not near genes chr2R 6016906 intergenic not near genes chr2R_4_6015001 chr2R_6015001 RAL-513 647 chr2R 6050290 6050298 chr2R 6050402 6050411 4 112 10.0 0.0 5.0 0.7 121 chr2R 6050290 intergenic CG34212 - chr2R 6050350 intergenic CG34212 - chr2R 6050411 intergenic CG34212 - chr2R_4_6050001 chr2R_6050001 RAL-513 648 chr2R 6088356 6088387 chr2R 6088469 6088500 11 112 4.5 3.5 4.0 2.2 144 chr2R 6088356 intergenic not near genes chr2R 6088428 intergenic not near genes chr2R 6088500 intergenic not near genes chr2R_11_6085001 chr2R_6085001 RAL-513 649 chr2R 6126920 6126964 chr2R 6127048 6127083 13 123 3.5 3.0 3.2 3.1 163 chr2R 6126920 intron EcR - chr2R 6127002 intron EcR - chr2R 6127083 intron EcR - chr2R_13_6125001 chr2R_6125001 RAL-513 650 chr2R 6168194 6168215 chr2R 6168278 6168317 13 94 3.0 2.0 2.5 3.7 123 chr2R 6168194 intron EcR - chr2R 6168256 intron EcR - chr2R 6168317 intron EcR - chr2R_13_6165001 chr2R_6165001 RAL-513 651 chr2R 6178100 6178143 chr2R 6178246 6178288 9 145 2.5 6.0 4.2 1.7 188 chr2R 6178100 intergenic not near genes chr2R 6178194 intergenic not near genes chr2R 6178288 intergenic not near genes chr2R_9_6175001 chr2R_6175001 RAL-513 652 chr2R 6494543 6494555 chr2R 6499291 6499326 F-element 4 4771 2.5 3.0 2.8 1.1 4783 chr2R 6494543 intergenic not near genes chr2R 6496934 intergenic not near genes chr2R 6499326 intergenic not near genes chr2R_4_6495001 chr2R_6495001 RAL-513 653 chr2R 6530527 6530570 chr2R 6530680 6530722 11 148 4.0 2.5 3.2 2.6 195 chr2R 6530527 intron jing + chr2R 6530624 intron jing + chr2R 6530722 intron jing + chr2R_11_6530001 chr2R_6530001 RAL-513 654 chr2R 6538358 6538409 chr2R 6538456 6538507 13 96 3.0 3.5 3.2 3.1 149 chr2R 6538358 intron jing + chr2R 6538432 intron jing + chr2R 6538507 intron jing + chr2R_13_6535001 chr2R_6535001 RAL-513 655 chr2R 6539804 6539852 chr2R 6539947 6539977 11 135 1.5 2.0 1.8 3.9 173 chr2R 6539804 intron jing + chr2R 6539890 intron jing + chr2R 6539977 intron jing + chr2R_11_6535001 chr2R_6535001 RAL-513 656 chr2R 6685868 6685890 chr2R 6685961 6685977 6 96 6.5 5.0 5.8 0.9 109 chr2R 6685868 intron,intron CG9422 +,Tdc2 - chr2R 6685922 intron,intron CG9422 +,Tdc2 - chr2R 6685977 intron,intron CG9422 +,Tdc2 - chr2R_6_6685001 chr2R_6685001 RAL-513 657 chr2R 6688887 6688914 chr2R 6689175 6689202 4 288 3.0 3.0 3.0 1.0 315 chr2R 6688887 intron,intron CG9422 +,Tdc2 - chr2R 6689044 intron,intron CG9422 +,Tdc2 - chr2R 6689202 intron,intron CG9422 +,Tdc2 - chr2R_4_6685001 chr2R_6685001 RAL-513 658 chr2R 6699591 6699618 chr2R 6699695 6699722 4 104 3.0 3.5 3.2 1.0 131 chr2R 6699591 intergenic Rab2 + chr2R 6699656 intergenic Rab2 + chr2R 6699722 intergenic Rab2 +,CG3409 -,CG45092 - chr2R_4_6695001 chr2R_6695001 RAL-513 659 chr2R 6712569 6712597 chr2R 6712683 6712705 10 113 5.0 2.5 3.8 2.1 136 chr2R 6712569 intron,intron CG3409 -,CG45092 - chr2R 6712637 intron,intron CG3409 -,CG45092 - chr2R 6712705 intron,intron CG3409 -,CG45092 - chr2R_10_6710001 chr2R_6710001 RAL-513 660 chr2R 6797076 6797084 chr2R 6797187 6797189 4 109 7.5 7.0 7.2 0.5 113 chr2R 6797076 5` UTR Epac - chr2R 6797132 5` UTR Epac - chr2R 6797189 5` UTR Epac - chr2R_4_6795001 chr2R_6795001 RAL-513 661 chr2R 6797086 6797105 chr2R 6797177 6797218 10 106 4.5 5.0 4.8 1.7 132 chr2R 6797086 5` UTR Epac - chr2R 6797152 5` UTR Epac - chr2R 6797218 5` UTR Epac - chr2R_10_6795001 chr2R_6795001 RAL-513 662 chr2R 6822388 6822434 chr2R 6822480 6822531 10 88 2.5 3.5 3.0 2.5 143 chr2R 6822388 3` UTR CR44442 - chr2R 6822460 3` UTR CR44442 - chr2R 6822531 3` UTR CR44442 - chr2R_10_6820001 chr2R_6820001 RAL-513 663 chr2R 6869688 6869733 chr2R 6869869 6869910 10 177 4.0 4.0 4.0 2.0 222 chr2R 6869688 intron coro - chr2R 6869799 intron coro - chr2R 6869910 intron coro - chr2R_10_6865001 chr2R_6865001 RAL-513 664 chr2R 6876210 6876227 chr2R 6876312 6876326 8 99 5.5 6.0 5.8 1.2 116 chr2R 6876210 intron,intron CR44169 +,Spn42Da - chr2R 6876268 intron,intron CR44169 +,Spn42Da - chr2R 6876326 5` UTR,intron CR44169 +,Spn42Da - chr2R_8_6875001 chr2R_6875001 RAL-513 665 chr2R 6876232 6876237 chr2R 6876311 6876327 5 91 5.0 5.5 5.2 0.8 95 chr2R 6876232 intron,intron CR44169 +,Spn42Da - chr2R 6876280 5` UTR,intron CR44169 +,Spn42Da - chr2R 6876327 5` UTR,intron CR44169 +,Spn42Da - chr2R_5_6875001 chr2R_6875001 RAL-513 666 chr2R 6952149 6952166 chr2R 6959749 6959766 opus 5 7600 7.0 2.5 4.8 0.9 7617 chr2R 6952149 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R 6955958 intron,intron mim -,CheB42c - chr2R 6959766 intron,intron mim -,CheB42c - chr2R_5_6955001 chr2R_6955001 RAL-513 667 chr2R 6964295 6964314 chr2R 6964360 6964411 6 92 1.5 3.5 2.5 1.7 116 chr2R 6964295 intron,intron mim -,CheB42c - chr2R 6964353 intron,intron mim -,CheB42c - chr2R 6964411 intron,intron mim -,CheB42c - chr2R_6_6960001 chr2R_6960001 RAL-513 668 chr2R 7009278 7009324 chr2R 7009631 7009678 9 349 6.5 2.0 4.2 1.7 400 chr2R 7009278 intergenic Tsp42Ed - chr2R 7009478 intergenic Tsp42Ed - chr2R 7009678 3` UTR Tsp42Ed - chr2R_9_7005001 chr2R_7005001 RAL-513 669 chr2R 7029691 7029733 chr2R 7029801 7029830 12 106 3.0 3.5 3.2 2.9 139 chr2R 7029691 intron Tsp42Eg + chr2R 7029760 intron Tsp42Eg + chr2R 7029830 intron Tsp42Eg + chr2R_12_7025001 chr2R_7025001 RAL-513 670 chr2R 7180996 7181023 chr2R 7181082 7181119 10 86 2.0 2.0 2.0 3.3 123 chr2R 7180996 intron pk + chr2R 7181058 intron pk + chr2R 7181119 intron pk + chr2R_10_7180001 chr2R_7180001 RAL-513 671 chr2R 7196552 7196589 chr2R 7201347 7201372 F-element 9 4789 4.0 1.0 2.5 2.6 4820 chr2R 7196552 intron pk + chr2R 7198962 intron pk + chr2R 7201372 intron pk + chr2R_9_7195001 chr2R_7195001 RAL-513 672 chr2R 7235825 7235851 chr2R 7240907 7240930 jockey 6 5094 5.0 2.5 3.8 1.2 5105 chr2R 7235825 intergenic not near genes chr2R 7238378 intergenic not near genes chr2R 7240930 intergenic not near genes chr2R_6_7235001 chr2R_7235001 RAL-513 673 chr2R 7250709 7250745 chr2R 7250827 7250861 5 107 3.0 4.0 3.5 1.1 152 chr2R 7250709 intergenic Gadd45 + chr2R 7250785 intergenic Gadd45 + chr2R 7250861 intergenic Gadd45 + chr2R_5_7250001 chr2R_7250001 RAL-513 674 chr2R 7272268 7272288 chr2R 7272356 7272389 6 93 0.5 4.0 2.2 1.9 121 chr2R 7272268 intergenic Br140 - chr2R 7272328 3` UTR Br140 - chr2R 7272389 3` UTR Br140 - chr2R_6_7270001 chr2R_7270001 RAL-513 675 chr2R 7417899 7418167 chr2R 7418005 7418240 18 97 5.5 11.5 8.5 1.9 341 chr2R 7417899 intergenic not near genes chr2R 7418070 intergenic not near genes chr2R 7418240 intergenic not near genes chr2R_18_7415001 chr2R_7415001 RAL-513 676 chr2R 7434885 7434904 chr2R 7439206 7439216 Juan 5 4317 6.0 6.0 6.0 0.7 4331 chr2R 7434885 intergenic so + chr2R 7437050 intergenic not near genes chr2R 7439216 intergenic not near genes chr2R_5_7435001 chr2R_7435001 RAL-513 677 chr2R 7459259 7459284 chr2R 7459367 7459392 8 107 6.5 3.5 5.0 1.3 133 chr2R 7459259 intergenic Inos -,CG11141 - chr2R 7459326 intergenic CG11141 -,Inos - chr2R 7459392 intergenic CG11141 - chr2R_8_7455001 chr2R_7455001 RAL-513 678 chr2R 7471996 7472012 chr2R 7472069 7472094 7 79 6.0 5.5 5.8 1.0 98 chr2R 7471996 intron Aldh-III - chr2R 7472045 intron Aldh-III - chr2R 7472094 intron Aldh-III - chr2R_7_7470001 chr2R_7470001 RAL-513 679 chr2R 7608397 7608403 chr2R 7613619 7613626 I-element 4 5223 6.0 0.0 3.0 1.0 5229 chr2R 7608397 intron CG1358 - chr2R 7611012 intron CG1358 - chr2R 7613626 intron CG1358 - chr2R_4_7610001 chr2R_7610001 RAL-513 680 chr2R 7608405 7608440 chr2R 7613610 7613612 I-element 10 5210 3.0 0.0 1.5 4.0 5207 chr2R 7608405 intron CG1358 - chr2R 7611008 intron CG1358 - chr2R 7613612 intron CG1358 - chr2R_10_7610001 chr2R_7610001 RAL-513 681 chr2R 7691994 7692038 chr2R 7692095 7692114 5 96 1.0 7.0 4.0 1.0 120 chr2R 7691994 intron CG1399 - chr2R 7692054 intron CG1399 - chr2R 7692114 intron CG1399 - chr2R_5_7690001 chr2R_7690001 RAL-513 682 chr2R 7815660 7815700 chr2R 7822140 7822189 Burdock 13 6485 3.5 1.0 2.2 4.1 6529 chr2R 7815660 intergenic CG1882 + chr2R 7818924 intergenic not near genes chr2R 7822189 3` UTR cathD - chr2R_13_7815001 chr2R_7815001 RAL-513 683 chr2R 7861935 7861946 chr2R 7862152 7862160 4 216 12.0 7.0 9.5 0.4 225 chr2R 7861935 intron Dgk - chr2R 7862048 intron Dgk - chr2R 7862160 intron Dgk - chr2R_4_7860001 chr2R_7860001 RAL-513 684 chr2R 7862215 7862245 chr2R 7867346 7867378 flea 4 5132 4.0 3.0 3.5 0.9 5163 chr2R 7862215 intron Dgk - chr2R 7864796 intron Dgk - chr2R 7867378 intron Dgk - chr2R_4_7860001 chr2R_7860001 RAL-513 685 chr2R 7869177 7869200 chr2R 7873983 7874006 Doc 5 4805 9.5 8.0 8.8 0.5 4829 chr2R 7869177 intron Dgk - chr2R 7871592 intron Dgk - chr2R 7874006 intron Dgk - chr2R_5_7870001 chr2R_7870001 RAL-513 686 chr2R 7916409 7916458 chr2R 7916514 7916562 20 102 0.5 4.5 2.5 5.7 153 chr2R 7916409 5` UTR CG12159 - chr2R 7916486 intergenic CG12159 -,Cul1 + chr2R 7916562 intergenic CG12159 -,Cul1 + chr2R_20_7915001 chr2R_7915001 RAL-513 687 chr2R 7997420 7997456 chr2R 7997546 7997572 11 122 2.5 2.5 2.5 3.1 152 chr2R 7997420 intron Hey - chr2R 7997496 intron Hey - chr2R 7997572 intron Hey - chr2R_11_7995001 chr2R_7995001 RAL-513 688 chr2R 8014404 8014455 chr2R 8014509 8014559 15 102 4.0 1.5 2.8 3.9 155 chr2R 8014404 intergenic not near genes chr2R 8014482 intergenic not near genes chr2R 8014559 intergenic not near genes chr2R_15_8010001 chr2R_8010001 RAL-513 689 chr2R 8015657 8015666 chr2R 8017672 8017708 4 2032 6.0 2.5 4.2 0.8 2051 chr2R 8015657 intergenic mir-4981 + chr2R 8016682 intergenic not near genes chr2R 8017708 intergenic not near genes chr2R_4_8015001 chr2R_8015001 RAL-513 690 chr2R 8036231 8036286 chr2R 8036333 8036387 6 100 1.5 2.0 1.8 2.1 156 chr2R 8036231 intron Optix + chr2R 8036309 intron Optix + chr2R 8036387 intron Optix + chr2R_6_8035001 chr2R_8035001 RAL-513 691 chr2R 8067055 8067068 chr2R 8067159 8067172 6 103 6.0 11.5 8.8 0.6 117 chr2R 8067055 intron CG17977 - chr2R 8067114 intron CG17977 - chr2R 8067172 exon CG17977 - chr2R_6_8065001 chr2R_8065001 RAL-513 692 chr2R 8067081 8067093 chr2R 8067148 8067175 7 94 3.5 7.5 5.5 1.1 94 chr2R 8067081 intron CG17977 - chr2R 8067128 exon CG17977 - chr2R 8067175 exon CG17977 - chr2R_7_8065001 chr2R_8065001 RAL-513 693 chr2R 8076667 8076710 chr2R 8076766 8076810 15 96 5.5 5.0 5.2 2.4 143 chr2R 8076667 intron lig + chr2R 8076738 intron lig + chr2R 8076810 intron lig + chr2R_15_8075001 chr2R_8075001 RAL-513 694 chr2R 8089243 8089261 chr2R 8089348 8089367 6 105 8.5 5.0 6.8 0.8 124 chr2R 8089243 3` UTR sut2 + chr2R 8089305 intergenic sut2 +,sut3 + chr2R 8089367 intergenic sut2 +,sut3 + chr2R_6_8085001 chr2R_8085001 RAL-513 695 chr2R 8089264 8089279 chr2R 8089346 8089385 5 97 6.5 5.0 5.8 0.7 121 chr2R 8089264 3` UTR sut2 + chr2R 8089324 intergenic sut2 +,sut3 + chr2R 8089385 intergenic sut2 +,sut3 + chr2R_5_8085001 chr2R_8085001 RAL-513 696 chr2R 8151595 8151640 chr2R 8151695 8151740 9 95 3.0 3.0 3.0 2.2 145 chr2R 8151595 intron,intron Lpin -,kermit - chr2R 8151668 intron,intron Lpin -,kermit - chr2R 8151740 intron,intron Lpin -,kermit - chr2R_9_8150001 chr2R_8150001 RAL-513 697 chr2R 8157888 8157911 chr2R 8157989 8158019 7 96 5.5 8.5 7.0 0.9 131 chr2R 8157888 5` UTR CR44068 + chr2R 8157954 5` UTR CR44068 + chr2R 8158019 5` UTR CR44068 + chr2R_7_8155001 chr2R_8155001 RAL-513 698 chr2R 8209035 8209064 chr2R 8209139 8209155 8 98 6.0 1.5 3.8 1.7 120 chr2R 8209035 intron LRP1 + chr2R 8209095 intron LRP1 + chr2R 8209155 intron LRP1 + chr2R_8_8205001 chr2R_8205001 RAL-513 699 chr2R 8209068 8209082 chr2R 8209138 8209179 5 86 4.0 1.5 2.8 1.3 111 chr2R 8209068 intron LRP1 + chr2R 8209124 intron LRP1 + chr2R 8209179 intron LRP1 + chr2R_5_8205001 chr2R_8205001 RAL-513 700 chr2R 8231678 8231714 chr2R 8231777 8231804 6 97 4.0 4.0 4.0 1.2 126 chr2R 8231678 exon dpn - chr2R 8231741 intron dpn - chr2R 8231804 intron dpn - chr2R_6_8230001 chr2R_8230001 RAL-513 701 chr2R 8236044 8236063 chr2R 8236144 8236150 6 97 2.5 3.5 3.0 1.5 106 chr2R 8236044 intergenic not near genes chr2R 8236097 intergenic not near genes chr2R 8236150 intergenic not near genes chr2R_6_8235001 chr2R_8235001 RAL-513 702 chr2R 8270359 8270403 chr2R 8270452 8270492 9 89 4.0 3.5 3.8 1.9 133 chr2R 8270359 intergenic not near genes chr2R 8270426 intergenic not near genes chr2R 8270492 intergenic not near genes chr2R_9_8270001 chr2R_8270001 RAL-513 703 chr2R 8330842 8330895 chr2R 8331348 8331372 roo 9 500 2.5 2.5 2.5 2.6 530 chr2R 8330842 intron pdm3 + chr2R 8331107 intron pdm3 + chr2R 8331372 intron pdm3 + chr2R_9_8330001 chr2R_8330001 RAL-513 704 chr2R 8355226 8355274 chr2R 8355330 8355377 8 103 6.5 3.5 5.0 1.3 151 chr2R 8355226 intron pdm3 + chr2R 8355302 intron pdm3 + chr2R 8355377 intron pdm3 + chr2R_8_8355001 chr2R_8355001 RAL-513 705 chr2R 8398227 8398240 chr2R 8402995 8403041 Doc 5 4794 4.0 3.0 3.5 1.1 4814 chr2R 8398227 intron CG2121 - chr2R 8400634 intron CG2121 - chr2R 8403041 intron CG2121 - chr2R_5_8400001 chr2R_8400001 RAL-513 706 chr2R 8452020 8452064 chr2R 8452122 8452166 14 99 2.5 3.0 2.8 3.7 146 chr2R 8452020 intergenic Mal-A1 - chr2R 8452093 intergenic Mal-A1 - chr2R 8452166 intergenic Mal-A1 - chr2R_14_8450001 chr2R_8450001 RAL-513 707 chr2R 8508746 8508770 chr2R 8508848 8508854 7 99 6.0 4.5 5.2 1.1 108 chr2R 8508746 intron mtt - chr2R 8508800 intron mtt - chr2R 8508854 intron mtt - chr2R_7_8505001 chr2R_8505001 RAL-513 708 chr2R 8525085 8525111 chr2R 8525162 8525178 6 87 0.0 2.5 1.2 2.7 93 chr2R 8525085 intron mtt - chr2R 8525132 intron mtt - chr2R 8525178 intron mtt - chr2R_6_8525001 chr2R_8525001 RAL-513 709 chr2R 8612564 8612607 chr2R 8612661 8612704 9 95 3.0 2.5 2.8 2.4 140 chr2R 8612564 intron CG8642 - chr2R 8612634 intron CG8642 - chr2R 8612704 intron CG8642 - chr2R_9_8610001 chr2R_8610001 RAL-513 710 chr2R 8656461 8656501 chr2R 8656598 8656637 11 133 5.5 2.0 3.8 2.3 176 chr2R 8656461 intron ptc + chr2R 8656549 intron ptc + chr2R 8656637 intron ptc + chr2R_11_8655001 chr2R_8655001 RAL-513 711 chr2R 8714706 8714721 chr2R 8714777 8714822 4 96 0.0 4.0 2.0 1.3 116 chr2R 8714706 3` UTR PGRP-SC1b + chr2R 8714764 3` UTR PGRP-SC1b + chr2R 8714822 3` UTR PGRP-SC1b + chr2R_4_8710001 chr2R_8710001 RAL-513 712 chr2R 8722748 8722790 chr2R 8723008 8723032 pogo 9 251 7.5 4.5 6.0 1.3 284 chr2R 8722748 intron CG14767 - chr2R 8722890 intron CG14767 - chr2R 8723032 intron CG14767 - chr2R_9_8720001 chr2R_8720001 RAL-513 713 chr2R 8755163 8755215 chr2R 8755644 8755697 12 480 3.5 4.5 4.0 2.4 534 chr2R 8755163 intron CG8740 + chr2R 8755430 intron CG8740 + chr2R 8755697 intron CG8740 + chr2R_12_8755001 chr2R_8755001 RAL-513 714 chr2R 8759745 8759788 chr2R 8759844 8759878 8 94 2.5 3.5 3.0 2.0 133 chr2R 8759745 intergenic CG8740 + chr2R 8759812 intergenic CG8740 + chr2R 8759878 intergenic CG8740 + chr2R_8_8755001 chr2R_8755001 RAL-513 715 chr2R 8777938 8777943 chr2R 8784143 8784150 diver 4 6214 1.5 7.0 4.2 0.8 6212 chr2R 8777938 intergenic not near genes chr2R 8781044 intergenic not near genes chr2R 8784150 intergenic not near genes chr2R_4_8780001 chr2R_8780001 RAL-513 716 chr2R 8833409 8833430 chr2R 8833510 8833532 9 100 7.5 3.0 5.2 1.5 123 chr2R 8833409 intron sns + chr2R 8833470 intron sns + chr2R 8833532 intron sns + chr2R_9_8830001 chr2R_8830001 RAL-513 717 chr2R 8833431 8833450 chr2R 8833507 8833520 16 91 4.0 3.0 3.5 3.6 89 chr2R 8833431 intron sns + chr2R 8833476 intron sns + chr2R 8833520 intron sns + chr2R_16_8830001 chr2R_8830001 RAL-513 718 chr2R 8850612 8850655 chr2R 8850987 8851030 4 368 6.0 2.0 4.0 0.8 418 chr2R 8850612 intron sns + chr2R 8850821 intron sns + chr2R 8851030 intron sns + chr2R_4_8850001 chr2R_8850001 RAL-513 719 chr2R 8976184 8976225 chr2R 8976293 8976323 11 98 4.0 3.5 3.8 2.3 139 chr2R 8976184 intron CG8213 - chr2R 8976254 intron CG8213 - chr2R 8976323 intron CG8213 - chr2R_11_8975001 chr2R_8975001 RAL-513 720 chr2R 9047407 9047429 chr2R 9047522 9047544 8 115 4.5 3.5 4.0 1.6 137 chr2R 9047407 intron CG13743 - chr2R 9047476 intron CG13743 - chr2R 9047544 intron CG13743 - chr2R_8_9045001 chr2R_9045001 RAL-513 721 chr2R 9063367 9063394 chr2R 9063650 9063681 8 289 2.5 1.0 1.8 2.9 314 chr2R 9063367 intron ana + chr2R 9063524 intron ana + chr2R 9063681 intron ana + chr2R_8_9060001 chr2R_9060001 RAL-513 722 chr2R 9065905 9065949 chr2R 9065995 9066051 14 100 3.0 4.5 3.8 2.9 146 chr2R 9065905 intron ana + chr2R 9065978 intron ana + chr2R 9066051 intron ana + chr2R_14_9065001 chr2R_9065001 RAL-513 723 chr2R 9151282 9151319 chr2R 9157772 9157809 Burdock 7 6486 7.5 4.0 5.8 1.0 6527 chr2R 9151282 exon CG30345 + chr2R 9154546 intergenic not near genes chr2R 9157809 intergenic CG8008 - chr2R_7_9150001 chr2R_9150001 RAL-513 724 chr2R 9212676 9212710 chr2R 9213182 9213201 roo 9 495 6.5 4.5 5.5 1.4 525 chr2R 9212676 intergenic CR45309 + chr2R 9212938 intergenic CR45309 + chr2R 9213201 5` UTR CR45309 + chr2R_9_9210001 chr2R_9210001 RAL-513 725 chr2R 9212711 9212722 chr2R 9213181 9213192 roo 5 492 5.0 4.5 4.8 0.9 481 chr2R 9212711 intergenic CR45309 + chr2R 9212952 intergenic CR45309 + chr2R 9213192 5` UTR CR45309 + chr2R_5_9210001 chr2R_9210001 RAL-513 726 chr2R 9352253 9352256 chr2R 9361385 9361385 roo 4 9144 1.5 3.5 2.5 1.1 9132 chr2R 9352253 intron CG13954 - chr2R 9356819 intron CG13954 - chr2R 9361385 intron CG13954 - chr2R_4_9355001 chr2R_9355001 RAL-513 727 chr2R 9368129 9368154 chr2R 9368204 9368225 5 78 3.5 0.0 1.8 1.8 96 chr2R 9368129 intron CG13954 - chr2R 9368177 intron CG13954 - chr2R 9368225 intron CG13954 - chr2R_5_9365001 chr2R_9365001 RAL-513 728 chr2R 9378096 9378117 chr2R 9378198 9378218 4 100 7.5 2.5 5.0 0.7 122 chr2R 9378096 intron CG13954 - chr2R 9378157 intron CG13954 - chr2R 9378218 intron CG13954 - chr2R_4_9375001 chr2R_9375001 RAL-513 729 chr2R 9378126 9378142 chr2R 9378196 9378244 9 95 3.0 2.5 2.8 2.4 118 chr2R 9378126 intron CG13954 - chr2R 9378185 intron CG13954 - chr2R 9378244 intron CG13954 - chr2R_9_9375001 chr2R_9375001 RAL-513 730 chr2R 9425897 9425943 chr2R 9425996 9426014 14 97 5.5 4.0 4.8 2.4 117 chr2R 9425897 3` UTR prel + chr2R 9425956 3` UTR prel + chr2R 9426014 3` UTR prel + chr2R_14_9425001 chr2R_9425001 RAL-513 731 chr2R 9561834 9561844 chr2R 9561912 9561952 4 100 0.0 0.5 0.2 3.3 118 chr2R 9561834 3` UTR,intron CR45281 -,CG1809 + chr2R 9561893 3` UTR,intron CR45281 -,CG1809 + chr2R 9561952 3` UTR,intron CR45281 -,CG1809 + chr2R_4_9560001 chr2R_9560001 RAL-513 732 chr2R 9616618 9616646 chr2R 9616743 9616771 4 125 12.0 2.5 7.2 0.5 153 chr2R 9616618 intron Mmp2 - chr2R 9616694 intron Mmp2 - chr2R 9616771 intron Mmp2 - chr2R_4_9615001 chr2R_9615001 RAL-513 733 chr2R 9653253 9653284 chr2R 9653343 9653388 14 98 4.5 3.0 3.8 2.9 135 chr2R 9653253 intron Mmp2 - chr2R 9653320 intron Mmp2 - chr2R 9653388 intron Mmp2 - chr2R_14_9650001 chr2R_9650001 RAL-513 734 chr2R 9699394 9699437 chr2R 9699500 9699542 14 105 7.0 7.0 7.0 1.8 148 chr2R 9699394 intergenic not near genes chr2R 9699468 intergenic not near genes chr2R 9699542 intergenic not near genes chr2R_14_9695001 chr2R_9695001 RAL-513 735 chr2R 9726611 9726638 chr2R 9734174 9734209 17.6 5 7569 5.0 4.5 4.8 0.9 7598 chr2R 9726611 intron sqa - chr2R 9730410 intron sqa - chr2R 9734209 intron sqa - chr2R_5_9730001 chr2R_9730001 RAL-513 736 chr2R 9869957 9869969 chr2R 9870050 9870065 6 94 11.5 4.5 8.0 0.7 108 chr2R 9869957 intron cbx - chr2R 9870011 intron cbx - chr2R 9870065 intron cbx - chr2R_6_9870001 chr2R_9870001 RAL-513 737 chr2R 9869975 9869997 chr2R 9870045 9870079 5 74 6.5 4.0 5.2 0.8 104 chr2R 9869975 intron cbx - chr2R 9870027 intron cbx - chr2R 9870079 intron cbx - chr2R_5_9870001 chr2R_9870001 RAL-513 738 chr2R 9871030 9871074 chr2R 9871525 9871579 roo 15 499 4.0 5.0 4.5 2.7 549 chr2R 9871030 intron cbx - chr2R 9871304 intron cbx - chr2R 9871579 intron,5` UTR cbx -,CG18446 + chr2R_15_9870001 chr2R_9870001 RAL-513 739 chr2R 9896804 9896842 chr2R 9896952 9896990 10 143 3.5 4.0 3.8 2.1 186 chr2R 9896804 exon CG30007 + chr2R 9896897 exon CG30007 + chr2R 9896990 exon CG30007 + chr2R_10_9895001 chr2R_9895001 RAL-513 740 chr2R 9945439 9945460 chr2R 9945635 9945671 BS 4 206 5.5 2.5 4.0 0.8 232 chr2R 9945439 intron Mef2 - chr2R 9945555 intron Mef2 - chr2R 9945671 intron Mef2 - chr2R_4_9945001 chr2R_9945001 RAL-513 741 chr2R 10005834 10005854 chr2R 10007018 10007039 1360 5 1184 9.5 6.0 7.8 0.6 1205 chr2R 10005834 intron Pka-R2 - chr2R 10006436 intron Pka-R2 - chr2R 10007039 intron Pka-R2 - chr2R_5_10005001 chr2R_10005001 RAL-513 742 chr2R 10005865 10005884 chr2R 10007016 10007029 1360 4 1159 3.0 5.0 4.0 0.8 1164 chr2R 10005865 intron Pka-R2 - chr2R 10006447 intron Pka-R2 - chr2R 10007029 intron Pka-R2 - chr2R_4_10005001 chr2R_10005001 RAL-513 743 chr2R 10047799 10047843 chr2R 10047902 10047946 8 100 2.5 3.5 3.0 2.0 147 chr2R 10047799 intron oys - chr2R 10047872 intron oys - chr2R 10047946 intron oys - chr2R_8_10045001 chr2R_10045001 RAL-513 744 chr2R 10132170 10132222 chr2R 10132269 10132323 10 98 2.0 2.0 2.0 3.3 153 chr2R 10132170 intron gem + chr2R 10132246 intron gem + chr2R 10132323 exon gem + chr2R_10_10130001 chr2R_10130001 RAL-513 745 chr2R 10176858 10176905 chr2R 10186045 10186092 roo 10 9187 2.5 1.5 2.0 3.3 9234 chr2R 10176858 intron KCNQ - chr2R 10181475 intron KCNQ - chr2R 10186092 intron KCNQ - chr2R_10_10180001 chr2R_10180001 RAL-513 746 chr2R 10203623 10203661 chr2R 10203728 10203766 8 104 4.0 4.0 4.0 1.6 143 chr2R 10203623 intergenic not near genes chr2R 10203694 intergenic not near genes chr2R 10203766 intergenic not near genes chr2R_8_10200001 chr2R_10200001 RAL-513 747 chr2R 10216192 10216219 chr2R 10216266 10216317 8 90 3.5 5.0 4.2 1.5 125 chr2R 10216192 intron,intron CG12912 -,Hr46 - chr2R 10216254 intron,intron CG12912 -,Hr46 - chr2R 10216317 intron,intron CG12912 -,Hr46 - chr2R_8_10215001 chr2R_10215001 RAL-513 748 chr2R 10225724 10225742 chr2R 10225826 10225839 5 101 3.0 3.0 3.0 1.2 115 chr2R 10225724 intron,intron CG12912 -,Hr46 - chr2R 10225782 intron,intron CG12912 -,Hr46 - chr2R 10225839 intron,intron CG12912 -,Hr46 - chr2R_5_10225001 chr2R_10225001 RAL-513 749 chr2R 10348043 10348064 chr2R 10348192 10348233 11 157 4.5 4.5 4.5 2.0 190 chr2R 10348043 intron CG42732 - chr2R 10348138 intron CG42732 - chr2R 10348233 intron CG42732 - chr2R_11_10345001 chr2R_10345001 RAL-513 750 chr2R 10352667 10352704 chr2R 10352749 10352800 15 92 3.0 0.5 1.8 5.4 133 chr2R 10352667 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352734 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352800 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_15_10350001 chr2R_10350001 RAL-513 751 chr2R 10376711 10376908 chr2R 10376859 10377012 6 137 0.0 0.0 0.0 6.0 301 chr2R 10376711 intron CG42732 - chr2R 10376862 intron CG42732 - chr2R 10377012 intron CG42732 - chr2R_6_10375001 chr2R_10375001 RAL-513 752 chr2R 10387985 10387999 chr2R 10388075 10388114 6 111 0.0 3.5 1.8 2.1 129 chr2R 10387985 intron CG42732 - chr2R 10388050 intron CG42732 - chr2R 10388114 intron CG42732 - chr2R_6_10385001 chr2R_10385001 RAL-513 753 chr2R 10409040 10409084 chr2R 10409137 10409170 8 93 0.0 3.0 1.5 3.2 130 chr2R 10409040 intron CG42732 - chr2R 10409105 intron CG42732 - chr2R 10409170 intron,exon CG42732 -,CG33477 - chr2R_8_10405001 chr2R_10405001 RAL-513 754 chr2R 10411785 10411836 chr2R 10411886 10411938 13 100 3.5 5.5 4.5 2.4 153 chr2R 10411785 intron CG42732 - chr2R 10411862 intron CG42732 - chr2R 10411938 intron CG42732 - chr2R_13_10410001 chr2R_10410001 RAL-513 755 chr2R 10644047 10644070 chr2R 10644145 10644168 5 98 4.5 0.5 2.5 1.4 121 chr2R 10644047 intron Git - chr2R 10644108 intron Git - chr2R 10644168 intron Git - chr2R_5_10640001 chr2R_10640001 RAL-513 756 chr2R 10644072 10644091 chr2R 10644144 10644189 7 89 2.5 0.5 1.5 2.8 117 chr2R 10644072 intron Git - chr2R 10644130 intron Git - chr2R 10644189 intron Git - chr2R_7_10640001 chr2R_10640001 RAL-513 757 chr2R 10775198 10775234 chr2R 10775288 10775308 4 89 1.5 1.0 1.2 1.8 110 chr2R 10775198 intron CG33144 - chr2R 10775253 intron CG33144 - chr2R 10775308 intron CG33144 - chr2R_4_10775001 chr2R_10775001 RAL-513 758 chr2R 10790129 10790151 chr2R 10790237 10790259 9 108 7.5 9.0 8.2 1.0 130 chr2R 10790129 intron CG33144 - chr2R 10790194 intron CG33144 - chr2R 10790259 intron CG33144 - chr2R_9_10790001 chr2R_10790001 RAL-513 759 chr2R 10790152 10790173 chr2R 10790233 10790265 7 97 3.5 7.5 5.5 1.1 113 chr2R 10790152 intron CG33144 - chr2R 10790208 intron CG33144 - chr2R 10790265 intron CG33144 - chr2R_7_10790001 chr2R_10790001 RAL-513 760 chr2R 10848256 10848319 chr2R 10848393 10848440 5 122 0.0 0.0 0.0 5.0 184 chr2R 10848256 intron CG30015 - chr2R 10848348 intron CG30015 - chr2R 10848440 intron CG30015 - chr2R_5_10845001 chr2R_10845001 RAL-513 761 chr2R 10947073 10947127 chr2R 10947180 10947221 5 93 3.0 0.0 1.5 2.0 148 chr2R 10947073 5` UTR CR45228 + chr2R 10947147 intergenic CR45228 + chr2R 10947221 intergenic CR45228 + chr2R_5_10945001 chr2R_10945001 RAL-513 762 chr2R 10948021 10948061 chr2R 10955586 10955600 17.6 6 7554 1.5 4.5 3.0 1.5 7579 chr2R 10948021 intergenic not near genes chr2R 10951810 intergenic not near genes chr2R 10955600 intergenic not near genes chr2R_6_10950001 chr2R_10950001 RAL-513 763 chr2R 10959079 10959096 chr2R 10959175 10959192 6 98 1.0 2.0 1.5 2.4 113 chr2R 10959079 intergenic not near genes chr2R 10959136 intergenic not near genes chr2R 10959192 intergenic not near genes chr2R_6_10955001 chr2R_10955001 RAL-513 764 chr2R 11009808 11009847 chr2R 11018990 11019022 roo 10 9185 6.5 6.5 6.5 1.3 9214 chr2R 11009808 intron luna - chr2R 11014415 intron luna - chr2R 11019022 intron luna - chr2R_10_11010001 chr2R_11010001 RAL-513 765 chr2R 11019858 11019908 chr2R 11024944 11024976 jockey 9 5080 2.5 1.5 2.0 3.0 5118 chr2R 11019858 intron luna - chr2R 11022417 intron luna - chr2R 11024976 intron luna - chr2R_9_11020001 chr2R_11020001 RAL-513 766 chr2R 11064698 11064731 chr2R 11064792 11064834 12 96 5.5 3.0 4.2 2.3 136 chr2R 11064698 intron luna - chr2R 11064766 intron luna - chr2R 11064834 intron luna - chr2R_12_11060001 chr2R_11060001 RAL-513 767 chr2R 11102853 11102860 chr2R 11102954 11102962 4 102 7.5 0.0 3.8 0.8 109 chr2R 11102853 intron luna - chr2R 11102908 intron luna - chr2R 11102962 intron luna - chr2R_4_11100001 chr2R_11100001 RAL-513 768 chr2R 11118145 11118183 chr2R 11118242 11118280 6 91 0.0 3.5 1.8 2.1 135 chr2R 11118145 3` UTR Cyp12d1-p - chr2R 11118212 3` UTR Cyp12d1-p - chr2R 11118280 3` UTR Cyp12d1-p - chr2R_6_11115001 chr2R_11115001 RAL-513 769 chr2R 11134095 11134142 chr2R 11134356 11134373 pogo 8 257 1.0 4.5 2.8 2.1 278 chr2R 11134095 intergenic not near genes chr2R 11134234 intergenic not near genes chr2R 11134373 intergenic not near genes chr2R_8_11130001 chr2R_11130001 RAL-513 770 chr2R 11161645 11161656 chr2R 11161802 11161815 6 159 6.5 5.5 6.0 0.9 170 chr2R 11161645 intron,intron CG13229 -,shn + chr2R 11161730 intron,intron CG13229 -,shn + chr2R 11161815 intron,intron CG13229 -,shn + chr2R_6_11160001 chr2R_11160001 RAL-513 771 chr2R 11207803 11207845 chr2R 11208007 11208058 BS 12 206 4.0 4.5 4.2 2.3 255 chr2R 11207803 intron shn + chr2R 11207930 intron shn + chr2R 11208058 intron shn + chr2R_12_11205001 chr2R_11205001 RAL-513 772 chr2R 11276786 11276816 chr2R 11276974 11277002 9 184 2.0 1.5 1.8 3.2 216 chr2R 11276786 intergenic not near genes chr2R 11276894 intergenic not near genes chr2R 11277002 intergenic not near genes chr2R_9_11275001 chr2R_11275001 RAL-513 773 chr2R 11285630 11285639 chr2R 11285739 11285747 4 109 2.0 4.5 3.2 1.0 117 chr2R 11285630 3` UTR fbl6 - chr2R 11285688 3` UTR fbl6 - chr2R 11285747 3` UTR fbl6 - chr2R_4_11285001 chr2R_11285001 RAL-513 774 chr2R 11297620 11297649 chr2R 11301946 11301980 flea 9 4335 6.5 2.5 4.5 1.6 4360 chr2R 11297620 intergenic CG42336 - chr2R 11299800 intergenic not near genes chr2R 11301980 5` UTR CG7741 + chr2R_9_11295001 chr2R_11295001 RAL-513 775 chr2R 11415518 11415550 chr2R 11418673 11418719 opus 10 3158 2.5 10.0 6.2 1.4 3201 chr2R 11415518 intron Drip - chr2R 11417118 intron Drip - chr2R 11418719 intron Drip - chr2R_10_11415001 chr2R_11415001 RAL-513 776 chr2R 11463891 11463914 chr2R 11463987 11464010 5 95 4.0 3.0 3.5 1.1 119 chr2R 11463891 3` UTR E(Pc) + chr2R 11463950 3` UTR E(Pc) + chr2R 11464010 3` UTR E(Pc) + chr2R_5_11460001 chr2R_11460001 RAL-513 777 chr2R 11464827 11464872 chr2R 11465992 11466024 16 1159 5.0 10.5 7.8 1.8 1197 chr2R 11464827 3` UTR E(Pc) + chr2R 11465426 intergenic E(Pc) + chr2R 11466024 intergenic not near genes chr2R_16_11465001 chr2R_11465001 RAL-513 778 chr2R 11464821 11464875 chr2R 11465906 11465960 15 1088 5.0 15.0 10.0 1.4 1139 chr2R 11464821 3` UTR E(Pc) + chr2R 11465390 intergenic E(Pc) + chr2R 11465960 intergenic not near genes chr2R_15_11465001 chr2R_11465001 RAL-513 779 chr2R 11472628 11472678 chr2R 11473845 11473894 pogo 15 1215 5.5 6.0 5.8 2.2 1266 chr2R 11472628 intergenic not near genes chr2R 11473261 intergenic not near genes chr2R 11473894 intergenic not near genes chr2R_15_11470001 chr2R_11470001 RAL-513 780 chr2R 11494296 11494586 chr2R 11494399 11494689 10 103 10.5 2.5 6.5 1.3 393 chr2R 11494296 intron inv + chr2R 11494492 intron inv + chr2R 11494689 intron inv + chr2R_10_11490001 chr2R_11490001 RAL-513 781 chr2R 11494597 11494631 chr2R 11494693 11494739 10 106 4.0 5.5 4.8 1.7 142 chr2R 11494597 intron inv + chr2R 11494668 intron inv + chr2R 11494739 intron inv + chr2R_10_11490001 chr2R_11490001 RAL-513 782 chr2R 11555379 11555421 chr2R 11555733 11555776 20 353 4.0 5.5 4.8 3.4 397 chr2R 11555379 intergenic not near genes chr2R 11555578 intergenic not near genes chr2R 11555776 intergenic not near genes chr2R_20_11555001 chr2R_11555001 RAL-513 783 chr2R 11614613 11614797 chr2R 11614721 11614890 10 104 1.0 2.0 1.5 4.0 277 chr2R 11614613 intron tou - chr2R 11614752 intron tou - chr2R 11614890 intron tou - chr2R_10_11610001 chr2R_11610001 RAL-513 784 chr2R 11863838 11863883 chr2R 11863945 11863990 8 106 5.0 1.5 3.2 1.9 152 chr2R 11863838 intergenic CG42531 + chr2R 11863914 intergenic CG42531 + chr2R 11863990 intergenic CG42531 + chr2R_8_11860001 chr2R_11860001 RAL-513 785 chr2R 11955368 11955371 chr2R 11955467 11955470 4 98 6.0 0.0 3.0 1.0 102 chr2R 11955368 intron CG13188 + chr2R 11955419 intron CG13188 + chr2R 11955470 intron CG13188 + chr2R_4_11955001 chr2R_11955001 RAL-513 786 chr2R 12093945 12093981 chr2R 12094068 12094114 8 124 2.0 2.5 2.2 2.5 169 chr2R 12093945 intron jeb - chr2R 12094030 intron jeb - chr2R 12094114 intron jeb - chr2R_8_12090001 chr2R_12090001 RAL-513 787 chr2R 12146481 12146503 chr2R 12147594 12147601 5 1104 25.5 18.0 21.8 0.2 1120 chr2R 12146481 intron,3` UTR Hen1 +,CG8878 - chr2R 12147041 intron,exon Hen1 +,CG8878 - chr2R 12147601 intron,exon Hen1 +,CG8878 - chr2R_5_12145001 chr2R_12145001 RAL-513 788 chr2R 12145912 12145966 chr2R 12148598 12148639 17 2678 35.5 33.0 34.2 0.5 2727 chr2R 12145912 exon Hen1 + chr2R 12147276 intron,intron Hen1 +,CG8878 - chr2R 12148639 intron,exon Hen1 +,CG8878 - chr2R_17_12145001 chr2R_12145001 RAL-513 789 chr2R 12185986 12186035 chr2R 12186101 12186150 17 111 3.0 4.0 3.5 3.8 164 chr2R 12185986 intron Cyp6g1 + chr2R 12186068 intron Cyp6g1 + chr2R 12186150 intron Cyp6g1 + chr2R_17_12185001 chr2R_12185001 RAL-513 790 chr2R 12185222 12185234 chr2R 12188128 12188142 5 2908 36.0 78.5 57.2 0.1 2920 chr2R 12185222 3` UTR,exon CG13175 +,CG33964 + chr2R 12186682 exon Cyp6g1 + chr2R 12188142 3` UTR Cyp6g1 + chr2R_5_12185001 chr2R_12185001 RAL-513 791 chr2R 12187474 12187484 chr2R 12190075 12190094 10 2600 42.0 59.5 50.8 0.2 2620 chr2R 12187474 exon Cyp6g1 + chr2R 12188784 exon Cyp6g2 - chr2R 12190094 exon Cyp6g2 - chr2R_10_12185001 chr2R_12185001 RAL-513 792 chr2R 12187473 12187509 chr2R 12190099 12190123 12 2617 55.0 50.0 52.5 0.2 2650 chr2R 12187473 exon Cyp6g1 + chr2R 12188798 exon Cyp6g2 - chr2R 12190123 exon Cyp6g2 - chr2R_12_12185001 chr2R_12185001 RAL-513 793 chr2R 12210119 12210162 chr2R 12210220 12210263 17 95 5.5 6.0 5.8 2.5 144 chr2R 12210119 exon Sr-CII - chr2R 12210191 intron Sr-CII - chr2R 12210263 exon Sr-CII - chr2R_17_12210001 chr2R_12210001 RAL-513 794 chr2R 12236211 12236223 chr2R 12236322 12236333 4 110 13.0 5.0 9.0 0.4 122 chr2R 12236211 intergenic not near genes chr2R 12236272 intergenic not near genes chr2R 12236333 intergenic not near genes chr2R_4_12235001 chr2R_12235001 RAL-513 795 chr2R 12244964 12244975 chr2R 12245032 12245060 6 91 0.0 2.0 1.0 3.0 96 chr2R 12244964 intergenic CG43244 - chr2R 12245012 intergenic CG43244 - chr2R 12245060 intergenic CG43244 - chr2R_6_12245001 chr2R_12245001 RAL-513 796 chr2R 12255697 12255752 chr2R 12255836 12255889 11 136 4.0 1.0 2.5 3.1 192 chr2R 12255697 3` UTR CG13168 + chr2R 12255793 intergenic CG13168 + chr2R 12255889 intergenic CG13168 + chr2R_11_12255001 chr2R_12255001 RAL-513 797 chr2R 12279040 12279058 chr2R 12279173 12279175 4 129 4.0 6.5 5.2 0.6 135 chr2R 12279040 intergenic Cam + chr2R 12279108 intergenic Cam + chr2R 12279175 intergenic Cam + chr2R_4_12275001 chr2R_12275001 RAL-513 798 chr2R 12284305 12284329 chr2R 12284401 12284431 4 101 0.0 5.5 2.8 1.1 126 chr2R 12284305 intron CG42700 + chr2R 12284368 intron CG42700 + chr2R 12284431 intron CG42700 + chr2R_4_12280001 chr2R_12280001 RAL-513 799 chr2R 12383025 12383058 chr2R 12383267 12383315 9 250 4.0 2.0 3.0 2.2 290 chr2R 12383025 intergenic CG8501 + chr2R 12383170 5` UTR CG8501 + chr2R 12383315 intron CG8501 + chr2R_9_12380001 chr2R_12380001 RAL-513 800 chr2R 12501682 12501726 chr2R 12503864 12503886 Rt1c 5 2169 1.0 7.0 4.0 1.0 2204 chr2R 12501682 intron fdl - chr2R 12502784 intron fdl - chr2R 12503886 intron fdl - chr2R_5_12500001 chr2R_12500001 RAL-513 801 chr2R 12527256 12527300 chr2R 12527483 12527528 7 227 3.5 5.0 4.2 1.3 272 chr2R 12527256 intergenic not near genes chr2R 12527392 intergenic not near genes chr2R 12527528 intergenic not near genes chr2R_7_12525001 chr2R_12525001 RAL-513 802 chr2R 12529265 12529293 chr2R 12529538 12529558 6 266 4.0 2.0 3.0 1.5 293 chr2R 12529265 5` UTR fra + chr2R 12529412 5` UTR fra + chr2R 12529558 5` UTR fra + chr2R_6_12525001 chr2R_12525001 RAL-513 803 chr2R 12540456 12540494 chr2R 12540557 12540562 5 82 5.0 2.5 3.8 1.0 106 chr2R 12540456 intron fra + chr2R 12540509 intron fra + chr2R 12540562 intron fra + chr2R_5_12540001 chr2R_12540001 RAL-513 804 chr2R 12548503 12548553 chr2R 12548600 12548649 5 91 0.0 4.0 2.0 1.7 146 chr2R 12548503 intron fra + chr2R 12548576 intron fra + chr2R 12548649 intron fra + chr2R_5_12545001 chr2R_12545001 RAL-513 805 chr2R 12627487 12627498 chr2R 12627600 12627611 5 113 0.0 8.0 4.0 1.0 124 chr2R 12627487 intron CG17760 + chr2R 12627549 intron CG17760 + chr2R 12627611 exon CG17760 + chr2R_5_12625001 chr2R_12625001 RAL-513 806 chr2R 12643774 12643812 chr2R 12643864 12643909 8 93 4.0 2.5 3.2 1.9 135 chr2R 12643774 intron CG8785 - chr2R 12643842 intron CG8785 - chr2R 12643909 exon CG8785 - chr2R_8_12640001 chr2R_12640001 RAL-513 807 chr2R 12702297 12702323 chr2R 12702418 12702460 6 134 2.0 2.0 2.0 2.0 163 chr2R 12702297 intergenic not near genes chr2R 12702378 intergenic not near genes chr2R 12702460 intergenic not near genes chr2R_6_12700001 chr2R_12700001 RAL-513 808 chr2R 12707497 12707544 chr2R 12715883 12715907 roo 7 8378 1.5 3.0 2.2 2.2 8410 chr2R 12707497 intron CG42663 + chr2R 12711702 intron CG42663 + chr2R 12715907 intron CG42663 + chr2R_7_12710001 chr2R_12710001 RAL-513 809 chr2R 12728854 12728904 chr2R 12728977 12729021 9 116 0.0 1.5 0.8 5.0 167 chr2R 12728854 intron CG42663 + chr2R 12728938 intron CG42663 + chr2R 12729021 intron CG42663 + chr2R_9_12725001 chr2R_12725001 RAL-513 810 chr2R 12771318 12771357 chr2R 12771447 12771486 4 123 2.5 3.0 2.8 1.1 168 chr2R 12771318 intergenic not near genes chr2R 12771402 intergenic not near genes chr2R 12771486 intergenic not near genes chr2R_4_12770001 chr2R_12770001 RAL-513 811 chr2R 12789276 12789322 chr2R 12797659 12797679 roo 8 8367 3.0 3.0 3.0 2.0 8403 chr2R 12789276 intron,3` UTR sca +,CR45137 - chr2R 12793478 intron,intron sca +,CR45137 - chr2R 12797679 intron,3` UTR sca +,CR45137 - chr2R_8_12790001 chr2R_12790001 RAL-513 812 chr2R 13017698 13017747 chr2R 13017808 13017838 14 106 1.5 1.0 1.2 6.4 140 chr2R 13017698 intergenic not near genes chr2R 13017768 intergenic not near genes chr2R 13017838 intergenic not near genes chr2R_14_13015001 chr2R_13015001 RAL-513 813 chr2R 13043030 13043042 chr2R 13043146 13043159 5 116 1.0 3.0 2.0 1.7 129 chr2R 13043030 intergenic not near genes chr2R 13043094 intergenic not near genes chr2R 13043159 intergenic not near genes chr2R_5_13040001 chr2R_13040001 RAL-513 814 chr2R 13078374 13078416 chr2R 13078527 13078569 10 149 0.5 2.0 1.2 4.5 195 chr2R 13078374 intron Drl-2 - chr2R 13078472 intron Drl-2 - chr2R 13078569 intron Drl-2 - chr2R_10_13075001 chr2R_13075001 RAL-513 815 chr2R 13089760 13089783 chr2R 13089873 13089912 8 113 4.0 6.0 5.0 1.3 152 chr2R 13089760 intergenic not near genes chr2R 13089836 intergenic not near genes chr2R 13089912 intergenic not near genes chr2R_8_13085001 chr2R_13085001 RAL-513 816 chr2R 13136823 13136861 chr2R 13141641 13141675 Doc 12 4814 3.5 3.5 3.5 2.7 4852 chr2R 13136823 exon Cap-G + chr2R 13139249 intron Cap-G + chr2R 13141675 intron Cap-G + chr2R_12_13135001 chr2R_13135001 RAL-513 817 chr2R 13167411 13167440 chr2R 13167525 13167554 7 113 2.0 0.0 1.0 3.5 143 chr2R 13167411 intron GLaz - chr2R 13167482 intron GLaz - chr2R 13167554 intron GLaz - chr2R_7_13165001 chr2R_13165001 RAL-513 818 chr2R 13174649 13174677 chr2R 13174740 13174773 16 102 2.5 3.5 3.0 4.0 124 chr2R 13174649 exon AGBE + chr2R 13174711 3` UTR AGBE + chr2R 13174773 3` UTR AGBE + chr2R_16_13170001 chr2R_13170001 RAL-513 819 chr2R 13248339 13248570 chr2R 13248447 13248671 15 102 2.5 1.5 2.0 5.0 332 chr2R 13248339 intron Mp20 + chr2R 13248505 intron Mp20 + chr2R 13248671 intron Mp20 + chr2R_15_13245001 chr2R_13245001 RAL-513 820 chr2R 13431469 13431517 chr2R 13431568 13431616 10 91 3.0 2.5 2.8 2.6 147 chr2R 13431469 intron CG42321 - chr2R 13431542 intron CG42321 - chr2R 13431616 intron CG42321 - chr2R_10_13430001 chr2R_13430001 RAL-513 821 chr2R 13470909 13470914 chr2R 13470989 13471013 4 94 6.5 3.5 5.0 0.7 104 chr2R 13470909 intron arr - chr2R 13470961 intron arr - chr2R 13471013 intron arr - chr2R_4_13470001 chr2R_13470001 RAL-513 822 chr2R 13470916 13470940 chr2R 13470988 13471032 11 89 2.5 3.5 3.0 2.8 116 chr2R 13470916 intron arr - chr2R 13470974 intron arr - chr2R 13471032 intron arr - chr2R_11_13470001 chr2R_13470001 RAL-513 823 chr2R 13566240 13566290 chr2R 13566340 13566390 17 99 2.5 1.0 1.8 6.1 150 chr2R 13566240 intergenic not near genes chr2R 13566315 intergenic not near genes chr2R 13566390 intergenic not near genes chr2R_17_13565001 chr2R_13565001 RAL-513 824 chr2R 13580491 13580533 chr2R 13580848 13580875 jockey 14 361 3.0 4.5 3.8 2.9 384 chr2R 13580491 3` UTR CG6191 - chr2R 13580683 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580875 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_14_13580001 chr2R_13580001 RAL-513 825 chr2R 13684252 13684264 chr2R 13684350 13684352 4 95 4.5 1.5 3.0 1.0 100 chr2R 13684252 intron fas + chr2R 13684302 intron fas + chr2R 13684352 intron fas + chr2R_4_13680001 chr2R_13680001 RAL-513 826 chr2R 13768977 13769007 chr2R 13769079 13769126 9 108 2.0 3.5 2.8 2.4 149 chr2R 13768977 intergenic not near genes chr2R 13769052 intergenic not near genes chr2R 13769126 intergenic not near genes chr2R_9_13765001 chr2R_13765001 RAL-513 827 chr2R 13790306 13790325 chr2R 13790402 13790421 7 96 4.0 0.0 2.0 2.3 115 chr2R 13790306 intergenic not near genes chr2R 13790364 intergenic not near genes chr2R 13790421 intergenic not near genes chr2R_7_13790001 chr2R_13790001 RAL-513 828 chr2R 13793145 13793161 chr2R 13793234 13793247 4 88 2.5 7.0 4.8 0.7 102 chr2R 13793145 intergenic not near genes chr2R 13793196 intergenic not near genes chr2R 13793247 intergenic not near genes chr2R_4_13790001 chr2R_13790001 RAL-513 829 chr2R 13817645 13817690 chr2R 13817741 13817792 6 100 3.0 0.0 1.5 2.4 147 chr2R 13817645 intron stj + chr2R 13817718 intron stj + chr2R 13817792 intron stj + chr2R_6_13815001 chr2R_13815001 RAL-513 830 chr2R 13888759 13888792 chr2R 13888837 13888902 8 86 4.5 1.0 2.8 2.1 143 chr2R 13888759 intron shot - chr2R 13888830 intron shot - chr2R 13888902 intron shot - chr2R_8_13885001 chr2R_13885001 RAL-513 831 chr2R 13905588 13905628 chr2R 13907586 13907601 Rt1a 4 1994 0.0 3.5 1.8 1.4 2013 chr2R 13905588 intron shot - chr2R 13906594 intron shot - chr2R 13907601 intron shot - chr2R_4_13905001 chr2R_13905001 RAL-513 832 chr2R 13925829 13925867 chr2R 13926025 13926062 6 196 5.0 2.5 3.8 1.2 233 chr2R 13925829 intron shot - chr2R 13925946 intron shot - chr2R 13926062 intron shot - chr2R_6_13925001 chr2R_13925001 RAL-513 833 chr2R 14018149 14018186 chr2R 14018253 14018286 6 103 2.0 2.0 2.0 2.0 137 chr2R 14018149 intron mam + chr2R 14018218 intron mam + chr2R 14018286 intron mam + chr2R_6_14015001 chr2R_14015001 RAL-513 834 chr2R 14142424 14142474 chr2R 14142534 14142583 12 105 4.5 4.5 4.5 2.2 159 chr2R 14142424 intergenic not near genes chr2R 14142504 intergenic not near genes chr2R 14142583 intergenic not near genes chr2R_12_14140001 chr2R_14140001 RAL-513 835 chr2R 14168356 14168396 chr2R 14168460 14168505 7 103 1.5 4.0 2.8 1.8 149 chr2R 14168356 intergenic CG18327 +,CG18324 +,CR44368 - chr2R 14168430 intergenic CG18327 +,CG18324 +,CR44368 - chr2R 14168505 intergenic CG18327 +,CG18324 +,CR44368 - chr2R_7_14165001 chr2R_14165001 RAL-513 836 chr2R 14277571 14277605 chr2R 14277673 14277707 11 98 6.5 10.5 8.5 1.2 136 chr2R 14277571 5` UTR Ih + chr2R 14277639 5` UTR Ih + chr2R 14277707 5` UTR Ih + chr2R_11_14275001 chr2R_14275001 RAL-513 837 chr2R 14378972 14379014 chr2R 14379448 14379496 10 479 4.5 4.5 4.5 1.8 524 chr2R 14378972 intron Dh44-R1 + chr2R 14379234 intron Dh44-R1 + chr2R 14379496 intron Dh44-R1 + chr2R_10_14375001 chr2R_14375001 RAL-513 838 chr2R 14405542 14405584 chr2R 14405899 14405941 8 349 4.0 9.5 6.8 1.0 399 chr2R 14405542 intergenic not near genes chr2R 14405742 intergenic not near genes chr2R 14405941 intergenic not near genes chr2R_8_14405001 chr2R_14405001 RAL-513 839 chr2R 14467297 14467325 chr2R 14476444 14476497 roo 15 9163 2.5 6.5 4.5 2.7 9200 chr2R 14467297 intergenic not near genes chr2R 14471897 intergenic not near genes chr2R 14476497 5` UTR CR44462 + chr2R_15_14470001 chr2R_14470001 RAL-513 840 chr2R 14497370 14497419 chr2R 14498553 14498604 1360 7 1183 0.0 5.0 2.5 2.0 1234 chr2R 14497370 3` UTR Cpsf160 - chr2R 14497987 intron Cpsf160 - chr2R 14498604 3` UTR Cpsf160 - chr2R_7_14495001 chr2R_14495001 RAL-513 841 chr2R 14514477 14514500 chr2R 14514590 14514613 4 113 2.0 2.0 2.0 1.3 136 chr2R 14514477 intron,intron Cpr51A -,CG30197 + chr2R 14514545 intron,intron Cpr51A -,CG30197 + chr2R 14514613 intron,intron Cpr51A -,CG30197 + chr2R_4_14510001 chr2R_14510001 RAL-513 842 chr2R 14530346 14530373 chr2R 14530455 14530482 10 107 6.0 5.0 5.5 1.5 136 chr2R 14530346 intron ttv + chr2R 14530414 intron ttv + chr2R 14530482 intron ttv + chr2R_10_14530001 chr2R_14530001 RAL-513 843 chr2R 14530728 14530772 chr2R 14530828 14530862 4 98 3.5 3.0 3.2 1.0 134 chr2R 14530728 intron ttv + chr2R 14530795 intron ttv + chr2R 14530862 intron ttv + chr2R_4_14530001 chr2R_14530001 RAL-513 844 chr2R 14718125 14718145 chr2R 14718200 14718225 4 76 3.5 5.0 4.2 0.8 100 chr2R 14718125 intergenic not near genes chr2R 14718175 intergenic not near genes chr2R 14718225 intergenic not near genes chr2R_4_14715001 chr2R_14715001 RAL-513 845 chr2R 14816086 14816136 chr2R 14816202 14816224 6 106 1.5 4.0 2.8 1.6 138 chr2R 14816086 intergenic not near genes chr2R 14816155 intergenic not near genes chr2R 14816224 intergenic not near genes chr2R_6_14815001 chr2R_14815001 RAL-513 846 chr2R 14855037 14855061 chr2R 14855122 14855153 4 98 0.0 0.5 0.2 3.3 116 chr2R 14855037 5` UTR Ciao1 - chr2R 14855095 intergenic Ciao1 -,HPS1 + chr2R 14855153 intergenic Ciao1 -,HPS1 + chr2R_4_14855001 chr2R_14855001 RAL-513 847 chr2R 14884688 14884724 chr2R 14884810 14884845 4 121 4.5 1.5 3.0 1.0 157 chr2R 14884688 intergenic not near genes chr2R 14884766 intergenic Cyp6a21 - chr2R 14884845 intergenic Cyp6a21 - chr2R_4_14880001 chr2R_14880001 RAL-513 848 chr2R 14889195 14889232 chr2R 14897823 14897844 Max-element 8 8621 4.5 0.5 2.5 2.3 8649 chr2R 14889195 intergenic Cyp6a8 - chr2R 14893520 intergenic not near genes chr2R 14897844 intergenic not near genes chr2R_8_14890001 chr2R_14890001 RAL-513 849 chr2R 14911682 14911715 chr2R 14911824 14911857 7 143 3.5 3.5 3.5 1.6 175 chr2R 14911682 intron CG10249 - chr2R 14911770 intron CG10249 - chr2R 14911857 intron CG10249 - chr2R_7_14910001 chr2R_14910001 RAL-513 850 chr2R 14968430 14968471 chr2R 14968525 14968529 10 85 6.0 3.5 4.8 1.7 99 chr2R 14968430 intron ckn + chr2R 14968480 intron ckn + chr2R 14968529 intron ckn + chr2R_10_14965001 chr2R_14965001 RAL-513 851 chr2R 14979746 14979767 chr2R 14979842 14979859 5 95 6.0 3.5 4.8 0.9 113 chr2R 14979746 3` UTR ckn + chr2R 14979802 3` UTR ckn + chr2R 14979859 3` UTR ckn + chr2R_5_14975001 chr2R_14975001 RAL-513 852 chr2R 14979772 14979793 chr2R 14979840 14979869 6 84 3.5 3.0 3.2 1.4 97 chr2R 14979772 3` UTR ckn + chr2R 14979820 3` UTR ckn + chr2R 14979869 3` UTR ckn + chr2R_6_14975001 chr2R_14975001 RAL-513 853 chr2R 14998497 14998512 chr2R 14998657 14998671 8 160 1.5 5.0 3.2 1.9 174 chr2R 14998497 intergenic not near genes chr2R 14998584 intergenic not near genes chr2R 14998671 intergenic not near genes chr2R_8_14995001 chr2R_14995001 RAL-513 854 chr2R 15015439 15015487 chr2R 15022882 15022927 mdg1 15 7438 4.0 5.5 4.8 2.6 7488 chr2R 15015439 intron hbs + chr2R 15019183 intron hbs + chr2R 15022927 intron hbs + chr2R_15_15015001 chr2R_15015001 RAL-513 855 chr2R 15053395 15053423 chr2R 15053657 15053699 13 274 3.0 3.5 3.2 3.1 304 chr2R 15053395 intergenic not near genes chr2R 15053547 intergenic not near genes chr2R 15053699 intergenic not near genes chr2R_13_15050001 chr2R_15050001 RAL-513 856 chr2R 15054729 15054765 chr2R 15054823 15054843 6 90 6.5 4.0 5.2 1.0 114 chr2R 15054729 intergenic not near genes chr2R 15054786 intergenic not near genes chr2R 15054843 intergenic not near genes chr2R_6_15050001 chr2R_15050001 RAL-513 857 chr2R 15119298 15119328 chr2R 15127798 15127828 Tirant 5 8500 7.0 1.5 4.2 1.0 8530 chr2R 15119298 intron chn + chr2R 15123563 intron chn + chr2R 15127828 intron chn + chr2R_5_15120001 chr2R_15120001 RAL-513 858 chr2R 15119330 15119345 chr2R 15127797 15127841 Tirant 6 8487 4.0 1.5 2.8 1.6 8511 chr2R 15119330 intron chn + chr2R 15123586 intron chn + chr2R 15127841 intron chn + chr2R_6_15120001 chr2R_15120001 RAL-513 859 chr2R 15133465 15133492 chr2R 15133562 15133591 4 98 10.5 4.5 7.5 0.5 126 chr2R 15133465 intron chn + chr2R 15133528 intron chn + chr2R 15133591 intron chn + chr2R_4_15130001 chr2R_15130001 RAL-513 860 chr2R 15133496 15133513 chr2R 15133556 15133577 5 68 5.5 4.0 4.8 0.9 81 chr2R 15133496 intron chn + chr2R 15133536 intron chn + chr2R 15133577 intron chn + chr2R_5_15130001 chr2R_15130001 RAL-513 861 chr2R 15137955 15137994 chr2R 15138055 15138096 6 100 3.5 1.0 2.2 1.9 141 chr2R 15137955 intron chn + chr2R 15138026 intron chn + chr2R 15138096 intron chn + chr2R_6_15135001 chr2R_15135001 RAL-513 862 chr2R 15196079 15196122 chr2R 15196195 15196238 14 111 6.5 5.5 6.0 2.0 159 chr2R 15196079 intergenic not near genes chr2R 15196158 intergenic not near genes chr2R 15196238 intergenic not near genes chr2R_14_15195001 chr2R_15195001 RAL-513 863 chr2R 15247835 15247876 chr2R 15248011 15248049 9 178 3.5 4.5 4.0 1.8 214 chr2R 15247835 intergenic not near genes chr2R 15247942 intergenic not near genes chr2R 15248049 intergenic not near genes chr2R_9_15245001 chr2R_15245001 RAL-513 864 chr2R 15296141 15296171 chr2R 15296244 15296274 9 101 2.5 4.5 3.5 2.0 133 chr2R 15296141 intron Trpm - chr2R 15296208 intron Trpm - chr2R 15296274 intron Trpm - chr2R_9_15295001 chr2R_15295001 RAL-513 865 chr2R 15308770 15308803 chr2R 15308860 15308888 6 91 4.0 4.5 4.2 1.2 118 chr2R 15308770 intron Trpm - chr2R 15308829 intron Trpm - chr2R 15308888 intron Trpm - chr2R_6_15305001 chr2R_15305001 RAL-513 866 chr2R 15363652 15363669 chr2R 15363751 15363756 4 94 3.0 2.0 2.5 1.1 104 chr2R 15363652 intron unc-5 + chr2R 15363704 intron unc-5 + chr2R 15363756 intron unc-5 + chr2R_4_15360001 chr2R_15360001 RAL-513 867 chr2R 15624832 15624882 chr2R 15624931 15624979 12 92 1.0 3.0 2.0 4.0 147 chr2R 15624832 intron CG42524 + chr2R 15624906 intron CG42524 + chr2R 15624979 intron CG42524 + chr2R_12_15620001 chr2R_15620001 RAL-513 868 chr2R 15685343 15685395 chr2R 15685466 15685515 12 120 3.0 3.0 3.0 3.0 172 chr2R 15685343 intron,exon Ranbp11 +,CG30082 - chr2R 15685429 intron,intron Ranbp11 +,CG30082 - chr2R 15685515 intron,intron Ranbp11 +,CG30082 - chr2R_12_15685001 chr2R_15685001 RAL-513 869 chr2R 15697878 15697905 chr2R 15697978 15698004 5 96 6.0 0.0 3.0 1.2 126 chr2R 15697878 exon CG33462 + chr2R 15697941 3` UTR CG33462 + chr2R 15698004 3` UTR CG33462 + chr2R_5_15695001 chr2R_15695001 RAL-513 870 chr2R 15877945 15877990 chr2R 15878050 15878073 7 98 4.0 1.0 2.5 2.0 128 chr2R 15877945 intron sli - chr2R 15878009 intron sli - chr2R 15878073 intron sli - chr2R_7_15875001 chr2R_15875001 RAL-513 871 chr2R 15889584 15889598 chr2R 15889694 15889719 7 114 2.0 1.5 1.8 2.5 135 chr2R 15889584 intron sli - chr2R 15889652 intron sli - chr2R 15889719 intron sli - chr2R_7_15885001 chr2R_15885001 RAL-513 872 chr2R 15891803 15891835 chr2R 15891899 15891916 6 89 1.5 5.0 3.2 1.4 113 chr2R 15891803 intron sli - chr2R 15891860 intron sli - chr2R 15891916 intron sli - chr2R_6_15890001 chr2R_15890001 RAL-513 873 chr2R 15902295 15902326 chr2R 15902391 15902402 7 93 4.5 0.0 2.2 2.2 107 chr2R 15902295 intron sli - chr2R 15902348 intron sli - chr2R 15902402 intron sli - chr2R_7_15900001 chr2R_15900001 RAL-513 874 chr2R 15914262 15914301 chr2R 15914366 15914381 10 99 7.5 4.0 5.8 1.5 119 chr2R 15914262 intron sli - chr2R 15914322 intron sli - chr2R 15914381 intron sli - chr2R_10_15910001 chr2R_15910001 RAL-513 875 chr2R 16245399 16245431 chr2R 16245513 16245536 4 109 4.5 4.0 4.2 0.8 137 chr2R 16245399 intron CngA - chr2R 16245468 intron CngA - chr2R 16245536 intron CngA - chr2R_4_16245001 chr2R_16245001 RAL-513 876 chr2R 16474321 16474373 chr2R 16474427 16474478 10 100 1.5 2.5 2.0 3.3 157 chr2R 16474321 intergenic not near genes chr2R 16474400 intergenic not near genes chr2R 16474478 intergenic not near genes chr2R_10_16470001 chr2R_16470001 RAL-513 877 chr2R 16518028 16518066 chr2R 16518124 16518162 6 96 2.0 4.5 3.2 1.4 134 chr2R 16518028 intron Sema-2a + chr2R 16518095 intron Sema-2a + chr2R 16518162 intron Sema-2a + chr2R_6_16515001 chr2R_16515001 RAL-513 878 chr2R 16539624 16539661 chr2R 16544852 16544868 copia 10 5224 4.0 0.5 2.2 3.1 5244 chr2R 16539624 intergenic not near genes chr2R 16542246 intergenic not near genes chr2R 16544868 intergenic not near genes chr2R_10_16540001 chr2R_16540001 RAL-513 879 chr2R 16571852 16571906 chr2R 16571967 16572021 14 112 3.5 4.5 4.0 2.8 169 chr2R 16571852 intergenic CG4927 + chr2R 16571936 intergenic CG4927 + chr2R 16572021 intergenic CG4927 + chr2R_14_16570001 chr2R_16570001 RAL-513 880 chr2R 16618727 16618745 chr2R 16618792 16618824 8 82 0.5 3.5 2.0 2.7 97 chr2R 16618727 intron CG5065 + chr2R 16618776 intron CG5065 + chr2R 16618824 5` UTR CG5065 + chr2R_8_16615001 chr2R_16615001 RAL-513 881 chr2R 16723914 16723950 chr2R 16724013 16724050 12 96 4.0 3.0 3.5 2.7 136 chr2R 16723914 intron CG30463 - chr2R 16723982 intron CG30463 - chr2R 16724050 intron CG30463 - chr2R_12_16720001 chr2R_16720001 RAL-513 882 chr2R 16775638 16775674 chr2R 16775925 16775930 9 279 0.5 4.0 2.2 2.8 292 chr2R 16775638 3` UTR Arp53D + chr2R 16775784 intergenic Arp53D + chr2R 16775930 intergenic Arp53D + chr2R_9_16775001 chr2R_16775001 RAL-513 883 chr2R 16893761 16893768 chr2R 16893864 16893864 4 101 7.5 3.5 5.5 0.6 103 chr2R 16893761 intron CG8910 - chr2R 16893812 intron CG8910 - chr2R 16893864 intron CG8910 - chr2R_4_16890001 chr2R_16890001 RAL-513 884 chr2R 16893772 16893804 chr2R 16893859 16893906 11 97 3.0 3.0 3.0 2.8 134 chr2R 16893772 intron CG8910 - chr2R 16893839 intron CG8910 - chr2R 16893906 intron CG8910 - chr2R_11_16890001 chr2R_16890001 RAL-513 885 chr2R 16902753 16902787 chr2R 16902881 16902927 11 130 4.5 7.0 5.8 1.6 174 chr2R 16902753 intergenic not near genes chr2R 16902840 intergenic not near genes chr2R 16902927 intergenic not near genes chr2R_11_16900001 chr2R_16900001 RAL-513 886 chr2R 16975183 16975222 chr2R 16975280 16975319 7 97 1.5 2.5 2.0 2.3 136 chr2R 16975183 intron Cbp53E + chr2R 16975251 intron Cbp53E + chr2R 16975319 intron Cbp53E + chr2R_7_16975001 chr2R_16975001 RAL-513 887 chr2R 17079044 17079089 chr2R 17079146 17079190 6 96 1.5 4.0 2.8 1.6 146 chr2R 17079044 intron CG30460 - chr2R 17079117 intron CG30460 - chr2R 17079190 intron CG30460 - chr2R_6_17075001 chr2R_17075001 RAL-513 888 chr2R 17139392 17139406 chr2R 17139552 17139565 6 160 3.5 7.0 5.2 1.0 173 chr2R 17139392 3` UTR CG11395 + chr2R 17139478 3` UTR,3` UTR CG11395 +,CG43103 - chr2R 17139565 3` UTR,3` UTR CG11395 +,CG43103 - chr2R_6_17135001 chr2R_17135001 RAL-513 889 chr2R 17147243 17147265 chr2R 17152278 17152316 jockey 11 5046 6.5 8.5 7.5 1.3 5073 chr2R 17147243 intergenic not near genes chr2R 17149780 intergenic not near genes chr2R 17152316 intergenic not near genes chr2R_11_17145001 chr2R_17145001 RAL-513 890 chr2R 17176375 17176385 chr2R 17182557 17182595 diver 5 6197 1.5 5.5 3.5 1.1 6220 chr2R 17176375 intergenic not near genes chr2R 17179485 intergenic not near genes chr2R 17182595 intergenic not near genes chr2R_5_17175001 chr2R_17175001 RAL-513 891 chr2R 17236506 17236534 chr2R 17241718 17241757 copia 9 5218 3.5 2.5 3.0 2.2 5251 chr2R 17236506 intron mbl + chr2R 17239132 intron mbl + chr2R 17241757 intron mbl + chr2R_9_17235001 chr2R_17235001 RAL-513 892 chr2R 17259115 17259161 chr2R 17259253 17259276 5 124 1.5 1.0 1.2 2.3 161 chr2R 17259115 intron mbl + chr2R 17259196 intron mbl + chr2R 17259276 intron mbl + chr2R_5_17255001 chr2R_17255001 RAL-513 893 chr2R 17389275 17389298 chr2R 17389361 17389409 7 103 5.5 3.5 4.5 1.3 134 chr2R 17389275 intergenic CR44344 - chr2R 17389342 intergenic CR44344 - chr2R 17389409 intergenic CR44344 - chr2R_7_17385001 chr2R_17385001 RAL-513 894 chr2R 17469254 17469301 chr2R 17469513 17469543 10 255 2.0 4.5 3.2 2.4 289 chr2R 17469254 intergenic Tes -,qkr54B + chr2R 17469398 intergenic Tes -,qkr54B + chr2R 17469543 intergenic qkr54B +,Tes - chr2R_10_17465001 chr2R_17465001 RAL-513 895 chr2R 17485899 17485940 chr2R 17490688 17490700 F-element 6 4781 6.0 4.5 5.2 1.0 4801 chr2R 17485899 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488300 intron NT5E-2 + chr2R 17490700 intron NT5E-2 + chr2R_6_17485001 chr2R_17485001 RAL-513 896 chr2R 17616974 17616986 chr2R 17617059 17617075 5 91 6.5 2.0 4.2 1.0 101 chr2R 17616974 intron,3` UTR CG10936 -,CG44403 - chr2R 17617024 intron,3` UTR CG10936 -,CG44403 - chr2R 17617075 intron,3` UTR CG10936 -,CG44403 - chr2R_5_17615001 chr2R_17615001 RAL-513 897 chr2R 17616988 17617011 chr2R 17617058 17617090 10 86 3.0 2.0 2.5 2.9 102 chr2R 17616988 intron,3` UTR CG10936 -,CG44403 - chr2R 17617039 intron,3` UTR CG10936 -,CG44403 - chr2R 17617090 intron,3` UTR CG10936 -,CG44403 - chr2R_10_17615001 chr2R_17615001 RAL-513 898 chr2R 17629603 17629631 chr2R 17629697 17629716 9 91 4.0 8.0 6.0 1.3 113 chr2R 17629603 intron,intron CG10936 -,rhi - chr2R 17629660 intron,intron CG10936 -,rhi - chr2R 17629716 intron,intron CG10936 -,rhi - chr2R_9_17625001 chr2R_17625001 RAL-513 899 chr2R 17708404 17708416 chr2R 17708478 17708517 4 94 0.5 0.5 0.5 2.7 113 chr2R 17708404 intron CG6424 - chr2R 17708460 intron CG6424 - chr2R 17708517 intron CG6424 - chr2R_4_17705001 chr2R_17705001 RAL-513 900 chr2R 17760653 17760699 chr2R 17760799 17760846 8 143 1.5 4.0 2.8 2.1 193 chr2R 17760653 intergenic HLH54F +,CG5009 + chr2R 17760750 intergenic CG5009 +,HLH54F + chr2R 17760846 intergenic CG5009 +,HLH54F + chr2R_8_17760001 chr2R_17760001 RAL-513 901 chr2R 17784007 17784053 chr2R 17784268 17784313 pogo 13 254 3.5 2.5 3.0 3.2 306 chr2R 17784007 intergenic mir-31a - chr2R 17784160 intergenic mir-31a - chr2R 17784313 intergenic mir-31a - chr2R_13_17780001 chr2R_17780001 RAL-513 902 chr2R 17794652 17794767 chr2R 17794763 17794866 15 104 0.0 0.0 0.0 15.0 214 chr2R 17794652 intron Dhit + chr2R 17794759 intron Dhit + chr2R 17794866 intron Dhit + chr2R_15_17790001 chr2R_17790001 RAL-513 903 chr2R 17807950 17807968 chr2R 17808064 17808086 5 117 1.5 6.0 3.8 1.0 136 chr2R 17807950 intron grh + chr2R 17808018 intron grh + chr2R 17808086 intron grh + chr2R_5_17805001 chr2R_17805001 RAL-513 904 chr2R 17846771 17846807 chr2R 17846863 17846901 13 96 6.0 3.0 4.5 2.4 130 chr2R 17846771 intron,5` UTR olf186-F +,olf186-M + chr2R 17846836 intron,5` UTR olf186-F +,olf186-M + chr2R 17846901 intron,5` UTR olf186-F +,olf186-M + chr2R_13_17845001 chr2R_17845001 RAL-513 905 chr2R 17872078 17872120 chr2R 17872185 17872227 13 104 3.0 2.5 2.8 3.4 149 chr2R 17872078 intergenic Mapmodulin - chr2R 17872152 intergenic Mapmodulin - chr2R 17872227 intergenic Mapmodulin - chr2R_13_17870001 chr2R_17870001 RAL-513 906 chr2R 17918164 17918189 chr2R 17918245 17918255 9 76 4.5 1.0 2.8 2.4 91 chr2R 17918164 intron Elk + chr2R 17918210 intron Elk + chr2R 17918255 intron Elk + chr2R_9_17915001 chr2R_17915001 RAL-513 907 chr2R 17929134 17929148 chr2R 17929225 17929261 6 108 5.0 4.0 4.5 1.1 127 chr2R 17929134 intergenic not near genes chr2R 17929198 intergenic not near genes chr2R 17929261 intergenic not near genes chr2R_6_17925001 chr2R_17925001 RAL-513 908 chr2R 17960152 17960174 chr2R 17960238 17960278 5 99 2.0 6.0 4.0 1.0 126 chr2R 17960152 intergenic not near genes chr2R 17960215 intergenic not near genes chr2R 17960278 intergenic not near genes chr2R_5_17960001 chr2R_17960001 RAL-513 909 chr2R 17970245 17970292 chr2R 17970354 17970403 12 113 29.0 31.5 30.2 0.4 158 chr2R 17970245 intergenic not near genes chr2R 17970324 intergenic not near genes chr2R 17970403 intergenic not near genes chr2R_12_17970001 chr2R_17970001 RAL-513 910 chr2R 17982905 17982946 chr2R 17983008 17983050 6 99 2.5 3.0 2.8 1.6 145 chr2R 17982905 intron dpr13 - chr2R 17982978 intron dpr13 - chr2R 17983050 intron dpr13 - chr2R_6_17980001 chr2R_17980001 RAL-513 911 chr2R 18045665 18045698 chr2R 18046035 18046070 jockey 5 372 4.0 5.5 4.8 0.9 405 chr2R 18045665 intergenic not near genes chr2R 18045868 intergenic not near genes chr2R 18046070 intergenic CG5767 - chr2R_5_18045001 chr2R_18045001 RAL-513 912 chr2R 18074586 18074623 chr2R 18074679 18074718 8 91 4.0 2.5 3.2 1.9 132 chr2R 18074586 intron CG34386 + chr2R 18074652 intron CG34386 + chr2R 18074718 intron CG34386 + chr2R_8_18070001 chr2R_18070001 RAL-513 913 chr2R 18075963 18075999 chr2R 18076076 18076112 9 110 3.5 7.5 5.5 1.4 149 chr2R 18075963 intron CG34386 + chr2R 18076038 intron CG34386 + chr2R 18076112 intron CG34386 + chr2R_9_18075001 chr2R_18075001 RAL-513 914 chr2R 18111693 18111708 chr2R 18115581 18115596 F-element 4 3888 7.0 6.5 6.8 0.5 3903 chr2R 18111693 intergenic not near genes chr2R 18113644 intergenic not near genes chr2R 18115596 intergenic not near genes chr2R_4_18110001 chr2R_18110001 RAL-513 915 chr2R 18193259 18193273 chr2R 18196378 18196387 5 3115 4.0 10.5 7.2 0.6 3128 chr2R 18193259 intergenic CG33958 - chr2R 18194823 intergenic not near genes chr2R 18196387 intergenic not near genes chr2R_5_18190001 chr2R_18190001 RAL-513 916 chr2R 18308280 18308296 chr2R 18308406 18308421 6 126 6.5 7.0 6.8 0.8 141 chr2R 18308280 intron sbb - chr2R 18308350 intron sbb - chr2R 18308421 intron sbb - chr2R_6_18305001 chr2R_18305001 RAL-513 917 chr2R 18308298 18308314 chr2R 18308401 18308440 4 105 6.0 4.5 5.2 0.6 142 chr2R 18308298 intron sbb - chr2R 18308369 intron sbb - chr2R 18308440 intron sbb - chr2R_4_18305001 chr2R_18305001 RAL-513 918 chr2R 18314392 18314407 chr2R 18314489 18314505 4 97 1.0 5.0 3.0 1.0 113 chr2R 18314392 intron sbb - chr2R 18314448 intron sbb - chr2R 18314505 intron sbb - chr2R_4_18310001 chr2R_18310001 RAL-513 919 chr2R 18358373 18358388 chr2R 18372605 18372620 roo 6 14231 8.0 6.5 7.2 0.7 14247 chr2R 18358373 intergenic not near genes chr2R 18365496 intergenic not near genes chr2R 18372620 intergenic not near genes chr2R_6_18365001 chr2R_18365001 RAL-513 920 chr2R 18358389 18358412 chr2R 18372603 18372608 roo 9 14220 5.0 5.5 5.2 1.5 14219 chr2R 18358389 intergenic not near genes chr2R 18365498 intergenic not near genes chr2R 18372608 intergenic not near genes chr2R_9_18365001 chr2R_18365001 RAL-513 921 chr2R 18398154 18398189 chr2R 18398256 18398293 6 109 1.0 1.5 1.2 2.7 139 chr2R 18398154 intron GstE10 - chr2R 18398224 intron GstE10 - chr2R 18398293 intron GstE10 - chr2R_6_18395001 chr2R_18395001 RAL-513 922 chr2R 18408267 18408313 chr2R 18408402 18408429 17 128 3.5 4.0 3.8 3.5 162 chr2R 18408267 exon GstE8 + chr2R 18408348 exon GstE8 + chr2R 18408429 exon GstE8 + chr2R_17_18405001 chr2R_18405001 RAL-513 923 chr2R 18480440 18480487 chr2R 18480567 18480614 6 127 0.0 0.0 0.0 6.0 174 chr2R 18480440 intron CG30116 - chr2R 18480527 intron CG30116 - chr2R 18480614 intron CG30116 - chr2R_6_18480001 chr2R_18480001 RAL-513 924 chr2R 18550566 18550585 chr2R 18550675 18550692 4 108 6.0 7.5 6.8 0.5 126 chr2R 18550566 intergenic not near genes chr2R 18550629 intergenic not near genes chr2R 18550692 intergenic not near genes chr2R_4_18550001 chr2R_18550001 RAL-513 925 chr2R 18550586 18550608 chr2R 18550671 18550693 11 99 2.5 6.0 4.2 2.1 107 chr2R 18550586 intergenic not near genes chr2R 18550640 intergenic not near genes chr2R 18550693 intergenic not near genes chr2R_11_18550001 chr2R_18550001 RAL-513 926 chr2R 18575805 18575831 chr2R 18581984 18582039 3S18 11 6184 2.5 4.0 3.2 2.6 6234 chr2R 18575805 intron GEFmeso - chr2R 18578922 intron GEFmeso - chr2R 18582039 intron GEFmeso - chr2R_11_18575001 chr2R_18575001 RAL-513 927 chr2R 18590853 18590894 chr2R 18600025 18600048 roo 7 9168 4.5 6.0 5.2 1.1 9195 chr2R 18590853 intron GEFmeso - chr2R 18595450 intron GEFmeso - chr2R 18600048 intron GEFmeso - chr2R_7_18595001 chr2R_18595001 RAL-513 928 chr2R 18646386 18646395 chr2R 18646550 18646559 6 163 9.5 2.5 6.0 0.9 173 chr2R 18646386 intron SP2637 - chr2R 18646472 intron SP2637 - chr2R 18646559 intron SP2637 - chr2R_6_18645001 chr2R_18645001 RAL-513 929 chr2R 18646405 18646433 chr2R 18646548 18646597 9 159 2.5 2.0 2.2 2.8 192 chr2R 18646405 intron SP2637 - chr2R 18646501 intron SP2637 - chr2R 18646597 intron SP2637 - chr2R_9_18645001 chr2R_18645001 RAL-513 930 chr2R 18692899 18692915 chr2R 18692989 18693021 7 101 3.5 3.0 3.2 1.7 122 chr2R 18692899 intron Sik3 + chr2R 18692960 intron Sik3 + chr2R 18693021 intron Sik3 + chr2R_7_18690001 chr2R_18690001 RAL-513 931 chr2R 18769632 18769735 chr2R 18769913 18769962 6 245 0.0 3.0 1.5 2.4 330 chr2R 18769632 intron Mctp + chr2R 18769797 intron Mctp + chr2R 18769962 intron Mctp + chr2R_6_18765001 chr2R_18765001 RAL-513 932 chr2R 18785911 18785918 chr2R 18786008 18786017 5 98 6.0 4.5 5.2 0.8 106 chr2R 18785911 intron CG15080 + chr2R 18785964 intron CG15080 + chr2R 18786017 intron CG15080 + chr2R_5_18785001 chr2R_18785001 RAL-513 933 chr2R 18785924 18785948 chr2R 18786005 18786010 5 86 2.5 4.5 3.5 1.1 86 chr2R 18785924 intron CG15080 + chr2R 18785967 intron CG15080 + chr2R 18786010 intron CG15080 + chr2R_5_18785001 chr2R_18785001 RAL-513 934 chr2R 18819020 18819063 chr2R 18819118 18819148 4 90 0.5 0.0 0.2 3.3 128 chr2R 18819020 intergenic Phb2 + chr2R 18819084 intergenic Phb2 + chr2R 18819148 intergenic Phb2 + chr2R_4_18815001 chr2R_18815001 RAL-513 935 chr2R 18862300 18862405 chr2R 18862401 18862508 6 100 0.0 0.0 0.0 6.0 208 chr2R 18862300 intergenic Jheh3 - chr2R 18862404 intergenic Jheh3 -,CG43069 + chr2R 18862508 intergenic CG43069 +,Jheh3 - chr2R_6_18860001 chr2R_18860001 RAL-513 936 chr2R 18943622 18943639 chr2R 18943737 18943745 5 112 3.5 5.5 4.5 0.9 123 chr2R 18943622 intron sano + chr2R 18943684 intron sano + chr2R 18943745 intron sano + chr2R_5_18940001 chr2R_18940001 RAL-513 937 chr2R 18953142 18953188 chr2R 18953245 18953286 10 105 4.5 4.0 4.2 1.9 144 chr2R 18953142 intron sano + chr2R 18953214 intron sano + chr2R 18953286 intron sano + chr2R_10_18950001 chr2R_18950001 RAL-513 938 chr2R 18980996 18981019 chr2R 18981262 18981278 6 264 5.5 2.0 3.8 1.2 282 chr2R 18980996 intergenic not near genes chr2R 18981137 intergenic not near genes chr2R 18981278 intergenic not near genes chr2R_6_18980001 chr2R_18980001 RAL-513 939 chr2R 18992002 18992028 chr2R 18992131 18992175 11 140 3.5 5.5 4.5 2.0 173 chr2R 18992002 intron tn + chr2R 18992088 intron tn + chr2R 18992175 intron tn + chr2R_11_18990001 chr2R_18990001 RAL-513 940 chr2R 19012932 19012967 chr2R 19013031 19013081 17 110 5.0 6.0 5.5 2.6 149 chr2R 19012932 intergenic not near genes chr2R 19013006 intergenic not near genes chr2R 19013081 intergenic not near genes chr2R_17_19010001 chr2R_19010001 RAL-513 941 chr2R 19015417 19015455 chr2R 19015523 19015542 8 101 4.5 2.0 3.2 1.9 125 chr2R 19015417 intergenic not near genes chr2R 19015480 intergenic not near genes chr2R 19015542 intergenic not near genes chr2R_8_19015001 chr2R_19015001 RAL-513 942 chr2R 19026034 19026043 chr2R 19026155 19026163 4 120 9.0 1.0 5.0 0.7 129 chr2R 19026034 intron 5-HT1B - chr2R 19026098 intron 5-HT1B - chr2R 19026163 intron 5-HT1B - chr2R_4_19025001 chr2R_19025001 RAL-513 943 chr2R 19042682 19042694 chr2R 19042779 19042792 4 98 6.5 6.5 6.5 0.5 110 chr2R 19042682 intergenic not near genes chr2R 19042737 intergenic not near genes chr2R 19042792 intergenic not near genes chr2R_4_19040001 chr2R_19040001 RAL-513 944 chr2R 19168718 19168763 chr2R 19168819 19168866 9 99 5.5 0.5 3.0 2.2 148 chr2R 19168718 intron CG10737 + chr2R 19168792 intron CG10737 + chr2R 19168866 intron CG10737 + chr2R_9_19165001 chr2R_19165001 RAL-513 945 chr2R 19246008 19246019 chr2R 19246212 19246223 5 203 7.5 5.0 6.2 0.7 215 chr2R 19246008 intergenic not near genes chr2R 19246116 intergenic not near genes chr2R 19246223 intergenic not near genes chr2R_5_19245001 chr2R_19245001 RAL-513 946 chr2R 19246021 19246056 chr2R 19246210 19246256 16 196 3.0 5.0 4.0 3.2 235 chr2R 19246021 intergenic not near genes chr2R 19246138 intergenic not near genes chr2R 19246256 intergenic not near genes chr2R_16_19245001 chr2R_19245001 RAL-513 947 chr2R 19300945 19300984 chr2R 19301044 19301057 18 100 4.5 3.0 3.8 3.8 112 chr2R 19300945 intron Tab2 + chr2R 19301001 intron Tab2 + chr2R 19301057 intron Tab2 + chr2R_18_19300001 chr2R_19300001 RAL-513 948 chr2R 19385097 19385139 chr2R 19385660 19385702 5 562 0.0 1.0 0.5 3.3 605 chr2R 19385097 intergenic CG10073 + chr2R 19385400 intergenic CG10073 + chr2R 19385702 intergenic CG10081 + chr2R_5_19385001 chr2R_19385001 RAL-513 949 chr2R 19603962 19604003 chr2R 19604057 19604106 5 98 1.0 1.5 1.2 2.3 144 chr2R 19603962 intron sm - chr2R 19604034 intron sm - chr2R 19604106 intron sm - chr2R_5_19600001 chr2R_19600001 RAL-513 950 chr2R 19684794 19684830 chr2R 19684982 19684999 5 184 4.0 3.0 3.5 1.1 205 chr2R 19684794 intergenic not near genes chr2R 19684896 intergenic not near genes chr2R 19684999 intergenic not near genes chr2R_5_19680001 chr2R_19680001 RAL-513 951 chr2R 19773995 19774038 chr2R 19774122 19774168 7 127 3.0 4.5 3.8 1.5 173 chr2R 19773995 intergenic not near genes chr2R 19774082 intergenic not near genes chr2R 19774168 intergenic not near genes chr2R_7_19770001 chr2R_19770001 RAL-513 952 chr2R 19776582 19776622 chr2R 19779923 19779965 jockey 12 3337 3.0 4.5 3.8 2.5 3383 chr2R 19776582 intergenic not near genes chr2R 19778274 intergenic not near genes chr2R 19779965 intergenic not near genes chr2R_12_19775001 chr2R_19775001 RAL-513 953 chr2R 19802005 19802055 chr2R 19802237 19802287 5 231 0.5 0.0 0.2 4.2 282 chr2R 19802005 intergenic not near genes chr2R 19802146 intergenic not near genes chr2R 19802287 intergenic not near genes chr2R_5_19800001 chr2R_19800001 RAL-513 954 chr2R 19837696 19837742 chr2R 19837814 19837861 13 116 3.0 3.0 3.0 3.2 165 chr2R 19837696 intergenic not near genes chr2R 19837778 intergenic not near genes chr2R 19837861 intergenic not near genes chr2R_13_19835001 chr2R_19835001 RAL-513 955 chr2R 19914833 19914878 chr2R 19922263 19922310 mdg1 7 7431 6.5 5.0 5.8 1.0 7477 chr2R 19914833 intergenic not near genes chr2R 19918572 intergenic not near genes chr2R 19922310 intergenic not near genes chr2R_7_19915001 chr2R_19915001 RAL-513 956 chr2R 19943265 19943280 chr2R 19943394 19943410 6 130 1.0 2.0 1.5 2.4 145 chr2R 19943265 intergenic not near genes chr2R 19943338 intergenic not near genes chr2R 19943410 intergenic not near genes chr2R_6_19940001 chr2R_19940001 RAL-513 957 chr2R 19953758 19953773 chr2R 19953834 19953871 5 87 5.5 4.5 5.0 0.8 113 chr2R 19953758 intergenic CG44622 + chr2R 19953814 5` UTR CG44622 + chr2R 19953871 5` UTR CG44622 + chr2R_5_19950001 chr2R_19950001 RAL-513 958 chr2R 19957438 19957454 chr2R 19962634 19962672 copia 5 5205 5.0 3.0 4.0 1.0 5234 chr2R 19957438 intergenic CG44623 + chr2R 19960055 intergenic not near genes chr2R 19962672 intergenic not near genes chr2R_5_19960001 chr2R_19960001 RAL-513 959 chr2R 19984443 19984492 chr2R 19985291 19985325 12 843 3.0 3.0 3.0 3.0 882 chr2R 19984443 3` UTR CG8654 + chr2R 19984884 3` UTR CG8654 + chr2R 19985325 intergenic CG8654 + chr2R_12_19980001 chr2R_19980001 RAL-513 960 chr2R 20031890 20031940 chr2R 20032003 20032043 15 114 3.0 2.0 2.5 4.3 153 chr2R 20031890 intergenic not near genes chr2R 20031966 intergenic not near genes chr2R 20032043 intergenic not near genes chr2R_15_20030001 chr2R_20030001 RAL-513 961 chr2R 20069228 20069272 chr2R 20071876 20071922 opus 13 2645 6.0 2.0 4.0 2.6 2694 chr2R 20069228 intergenic not near genes chr2R 20070575 intergenic not near genes chr2R 20071922 intergenic not near genes chr2R_13_20070001 chr2R_20070001 RAL-513 962 chr2R 20080600 20080623 chr2R 20080687 20080704 6 92 0.0 6.5 3.2 1.4 104 chr2R 20080600 intergenic not near genes chr2R 20080652 intergenic not near genes chr2R 20080704 intergenic not near genes chr2R_6_20080001 chr2R_20080001 RAL-513 963 chr2R 20326739 20326787 chr2R 20326836 20326860 13 90 4.0 2.0 3.0 3.2 121 chr2R 20326739 5` UTR MED8 - chr2R 20326800 5` UTR MED8 - chr2R 20326860 intergenic MED8 -,CG8929 + chr2R_13_20325001 chr2R_20325001 RAL-513 964 chr2R 20391568 20391617 chr2R 20391672 20391689 12 100 5.0 4.5 4.8 2.1 121 chr2R 20391568 intergenic not near genes chr2R 20391628 intergenic not near genes chr2R 20391689 intergenic not near genes chr2R_12_20390001 chr2R_20390001 RAL-513 965 chr2R 20395043 20395053 chr2R 20395192 20395245 6 184 5.0 0.0 2.5 1.7 202 chr2R 20395043 intergenic not near genes chr2R 20395144 intergenic not near genes chr2R 20395245 intergenic not near genes chr2R_6_20395001 chr2R_20395001 RAL-513 966 chr2R 20422543 20422594 chr2R 20422642 20422693 7 99 4.0 4.0 4.0 1.4 150 chr2R 20422543 intergenic not near genes chr2R 20422618 intergenic not near genes chr2R 20422693 intergenic not near genes chr2R_7_20420001 chr2R_20420001 RAL-513 967 chr2R 20523022 20523069 chr2R 20523152 20523198 12 127 1.0 4.0 2.5 3.4 176 chr2R 20523022 intergenic not near genes chr2R 20523110 intergenic not near genes chr2R 20523198 intergenic not near genes chr2R_12_20520001 chr2R_20520001 RAL-513 968 chr2R 20578638 20578682 chr2R 20578747 20578791 6 109 5.5 6.0 5.8 0.9 153 chr2R 20578638 intron qsm - chr2R 20578714 intron qsm - chr2R 20578791 intron qsm - chr2R_6_20575001 chr2R_20575001 RAL-513 969 chr2R 20601728 20601752 chr2R 20601807 20601847 12 94 2.5 5.0 3.8 2.5 119 chr2R 20601728 intron bl + chr2R 20601788 intron bl + chr2R 20601847 intron bl + chr2R_12_20600001 chr2R_20600001 RAL-513 970 chr2R 20678184 20678234 chr2R 20678334 20678382 5 149 0.5 5.0 2.8 1.3 198 chr2R 20678184 intergenic not near genes chr2R 20678283 intergenic not near genes chr2R 20678382 intergenic not near genes chr2R_5_20675001 chr2R_20675001 RAL-513 971 chr2R 20739433 20739475 chr2R 20744210 20744224 F-element 13 4782 2.5 4.5 3.5 2.9 4791 chr2R 20739433 intron dpr + chr2R 20741828 intron dpr + chr2R 20744224 intron dpr + chr2R_13_20740001 chr2R_20740001 RAL-513 972 chr2R 20772258 20772310 chr2R 20772361 20772409 18 99 2.5 2.0 2.2 5.6 151 chr2R 20772258 intergenic not near genes chr2R 20772334 intergenic not near genes chr2R 20772409 intergenic not near genes chr2R_18_20770001 chr2R_20770001 RAL-513 973 chr2R 20783300 20783328 chr2R 20788092 20788119 F-element 9 4791 4.0 7.0 5.5 1.4 4819 chr2R 20783300 intergenic not near genes chr2R 20785710 intergenic not near genes chr2R 20788119 intergenic CG43666 - chr2R_9_20785001 chr2R_20785001 RAL-513 974 chr2R 20814344 20814350 chr2R 20815274 20815280 5 931 5.0 0.0 2.5 1.4 936 chr2R 20814344 intergenic not near genes chr2R 20814812 intergenic not near genes chr2R 20815280 intergenic not near genes chr2R_5_20810001 chr2R_20810001 RAL-513 975 chr2R 20962886 20962933 chr2R 20963004 20963042 15 115 4.0 3.0 3.5 3.3 156 chr2R 20962886 intergenic not near genes chr2R 20962964 intergenic not near genes chr2R 20963042 intergenic not near genes chr2R_15_20960001 chr2R_20960001 RAL-513 976 chr2R 21018418 21018460 chr2R 21018515 21018556 7 94 2.5 2.5 2.5 2.0 138 chr2R 21018418 intron RIC-3 + chr2R 21018487 intron RIC-3 + chr2R 21018556 intron RIC-3 + chr2R_7_21015001 chr2R_21015001 RAL-513 977 chr2R 21029520 21029545 chr2R 21029599 21029605 10 82 4.0 4.0 4.0 2.0 85 chr2R 21029520 3` UTR CR45148 - chr2R 21029562 3` UTR CR45148 - chr2R 21029605 3` UTR CR45148 - chr2R_10_21025001 chr2R_21025001 RAL-513 978 chr2R 21136902 21136908 chr2R 21136986 21137012 4 98 8.0 2.0 5.0 0.7 110 chr2R 21136902 intron Magi - chr2R 21136957 intron Magi - chr2R 21137012 intron Magi - chr2R_4_21135001 chr2R_21135001 RAL-513 979 chr2R 21136909 21136940 chr2R 21136983 21137003 7 92 0.0 2.0 1.0 3.5 94 chr2R 21136909 intron Magi - chr2R 21136956 intron Magi - chr2R 21137003 intron Magi - chr2R_7_21135001 chr2R_21135001 RAL-513 980 chr2R 21151105 21151145 chr2R 21153749 21153798 opus 12 2651 6.0 5.0 5.5 1.8 2693 chr2R 21151105 intron CG30389 - chr2R 21152452 intron CG30389 - chr2R 21153798 intron CG30389 - chr2R_12_21150001 chr2R_21150001 RAL-513 981 chr2R 21182921 21182930 chr2R 21183149 21183176 6 243 2.5 3.0 2.8 1.6 255 chr2R 21182921 intergenic Pu +,tud + chr2R 21183048 intergenic tud +,Pu + chr2R 21183176 intergenic tud + chr2R_6_21180001 chr2R_21180001 RAL-513 982 chr2R 21259654 21259660 chr2R 21259743 21259759 4 94 5.0 3.0 4.0 0.8 105 chr2R 21259654 intron Rgk3 + chr2R 21259706 intron Rgk3 + chr2R 21259759 intron Rgk3 + chr2R_4_21255001 chr2R_21255001 RAL-513 983 chr2R 21323849 21323879 chr2R 21323931 21323976 8 88 7.0 8.0 7.5 0.9 127 chr2R 21323849 intron dom + chr2R 21323912 intron dom + chr2R 21323976 intron dom + chr2R_8_21320001 chr2R_21320001 RAL-513 984 chr2R 21344425 21344468 chr2R 21344531 21344574 9 102 2.5 4.5 3.5 2.0 149 chr2R 21344425 exon CG15666 + chr2R 21344500 intron CG15666 + chr2R 21344574 intron CG15666 + chr2R_9_21340001 chr2R_21340001 RAL-513 985 chr2R 21363117 21363177 chr2R 21363235 21363285 5 115 0.0 0.0 0.0 5.0 168 chr2R 21363117 intron cv-2 - chr2R 21363201 intron cv-2 - chr2R 21363285 intron cv-2 - chr2R_5_21360001 chr2R_21360001 RAL-513 986 chr2R 21648699 21648715 chr2R 21648941 21648956 4 242 6.5 5.5 6.0 0.6 257 chr2R 21648699 intron CG10082 + chr2R 21648828 intron CG10082 + chr2R 21648956 intron CG10082 + chr2R_4_21645001 chr2R_21645001 RAL-513 987 chr2R 21648725 21648746 chr2R 21648938 21648960 6 226 4.5 4.5 4.5 1.1 235 chr2R 21648725 intron CG10082 + chr2R 21648842 intron CG10082 + chr2R 21648960 intron CG10082 + chr2R_6_21645001 chr2R_21645001 RAL-513 988 chr2R 21721592 21721610 chr2R 21721670 21721717 5 101 1.5 0.5 1.0 2.5 125 chr2R 21721592 intron LBR + chr2R 21721654 intron LBR + chr2R 21721717 intron LBR + chr2R_5_21720001 chr2R_21720001 RAL-513 989 chr2R 21738257 21738311 chr2R 21747437 21747449 roo 8 9168 0.5 4.5 2.5 2.3 9192 chr2R 21738257 intergenic not near genes chr2R 21742853 intergenic not near genes chr2R 21747449 intergenic not near genes chr2R_8_21740001 chr2R_21740001 RAL-513 990 chr2R 21753065 21753112 chr2R 21753569 21753617 roo 17 500 6.5 5.5 6.0 2.4 552 chr2R 21753065 intergenic not near genes chr2R 21753341 intergenic not near genes chr2R 21753617 intergenic not near genes chr2R_17_21750001 chr2R_21750001 RAL-513 991 chr2R 21809511 21809557 chr2R 21817768 21817799 roo 5 8255 4.0 2.5 3.2 1.2 8288 chr2R 21809511 intergenic not near genes chr2R 21813655 intergenic not near genes chr2R 21817799 intergenic not near genes chr2R_5_21810001 chr2R_21810001 RAL-513 992 chr2R 21857333 21857345 chr2R 21857444 21857452 4 110 8.0 4.5 6.2 0.6 119 chr2R 21857333 intergenic not near genes chr2R 21857392 intergenic not near genes chr2R 21857452 intergenic not near genes chr2R_4_21855001 chr2R_21855001 RAL-513 993 chr2R 21857357 21857368 chr2R 21857436 21857478 7 98 3.5 4.0 3.8 1.5 121 chr2R 21857357 intergenic not near genes chr2R 21857418 intergenic not near genes chr2R 21857478 intergenic not near genes chr2R_7_21855001 chr2R_21855001 RAL-513 994 chr2R 21867004 21867017 chr2R 21867102 21867125 4 104 3.5 4.0 3.8 0.8 121 chr2R 21867004 intergenic comr - chr2R 21867064 intergenic comr - chr2R 21867125 intergenic comr - chr2R_4_21865001 chr2R_21865001 RAL-513 995 chr2R 21886114 21886152 chr2R 21886211 21886236 8 94 4.0 0.5 2.2 2.5 122 chr2R 21886114 intron Fili + chr2R 21886175 intron Fili + chr2R 21886236 intron Fili + chr2R_8_21885001 chr2R_21885001 RAL-513 996 chr2R 21906256 21906297 chr2R 21906378 21906418 4 121 2.5 3.0 2.8 1.1 162 chr2R 21906256 intron Fili + chr2R 21906337 intron Fili + chr2R 21906418 intron Fili + chr2R_4_21905001 chr2R_21905001 RAL-513 997 chr2R 21919852 21919901 chr2R 21919960 21919988 19 99 6.0 4.5 5.2 3.1 136 chr2R 21919852 intron Fili + chr2R 21919920 intron Fili + chr2R 21919988 intron Fili + chr2R_19_21915001 chr2R_21915001 RAL-513 998 chr2R 21936449 21936490 chr2R 21936895 21936937 10 444 6.0 7.0 6.5 1.3 488 chr2R 21936449 intron,exon Fili +,CG43742 - chr2R 21936693 intron,exon Fili +,CG43742 - chr2R 21936937 intron Fili + chr2R_10_21935001 chr2R_21935001 RAL-513 999 chr2R 22002304 22002331 chr2R 22002401 22002434 7 99 3.0 5.0 4.0 1.4 130 chr2R 22002304 intron CG34370 - chr2R 22002369 intron CG34370 - chr2R 22002434 intron CG34370 - chr2R_7_22000001 chr2R_22000001 RAL-513 1000 chr2R 22003091 22003121 chr2R 22003181 22003224 10 90 2.5 5.5 4.0 2.0 133 chr2R 22003091 intron CG34370 - chr2R 22003158 intron CG34370 - chr2R 22003224 intron CG34370 - chr2R_10_22000001 chr2R_22000001 RAL-513 1001 chr2R 22025636 22025676 chr2R 22025739 22025789 12 112 5.0 3.5 4.2 2.3 153 chr2R 22025636 intron CG34370 - chr2R 22025712 intron CG34370 - chr2R 22025789 intron CG34370 - chr2R_12_22025001 chr2R_22025001 RAL-513 1002 chr2R 22029516 22029526 chr2R 22029604 22029624 6 96 3.5 0.0 1.8 2.1 108 chr2R 22029516 intron CG34370 - chr2R 22029570 intron CG34370 - chr2R 22029624 intron CG34370 - chr2R_6_22025001 chr2R_22025001 RAL-513 1003 chr2R 22095574 22095615 chr2R 22095673 22095715 10 92 5.0 3.0 4.0 2.0 141 chr2R 22095574 intron CG11073 - chr2R 22095644 intron CG11073 - chr2R 22095715 intron CG11073 - chr2R_10_22095001 chr2R_22095001 RAL-513 1004 chr2R 22118427 22118449 chr2R 22118508 22118547 8 94 4.0 4.0 4.0 1.6 120 chr2R 22118427 intron Vrp1 - chr2R 22118487 intron Vrp1 - chr2R 22118547 intron Vrp1 - chr2R_8_22115001 chr2R_22115001 RAL-513 1005 chr2R 22124286 22124336 chr2R 22124395 22124445 21 100 6.0 5.5 5.8 3.1 159 chr2R 22124286 3` UTR mei-S332 + chr2R 22124366 3` UTR mei-S332 + chr2R 22124445 intergenic mei-S332 +,GM130 - chr2R_21_22120001 chr2R_22120001 RAL-513 1006 chr2R 22185673 22185692 chr2R 22185792 22185806 7 118 3.5 1.5 2.5 2.0 133 chr2R 22185673 3` UTR MED16 + chr2R 22185740 3` UTR MED16 + chr2R 22185806 3` UTR MED16 + chr2R_7_22185001 chr2R_22185001 RAL-513 1007 chr2R 22189443 22189457 chr2R 22189589 22189598 4 145 4.5 2.5 3.5 0.9 155 chr2R 22189443 3` UTR Vps35 + chr2R 22189520 3` UTR Vps35 + chr2R 22189598 3` UTR Vps35 + chr2R_4_22185001 chr2R_22185001 RAL-513 1008 chr2R 22189461 22189474 chr2R 22189574 22189620 5 140 3.0 2.5 2.8 1.3 159 chr2R 22189461 3` UTR Vps35 + chr2R 22189540 3` UTR Vps35 + chr2R 22189620 3` UTR Vps35 + chr2R_5_22185001 chr2R_22185001 RAL-513 1009 chr2R 22292060 22292103 chr2R 22292161 22292177 14 101 1.0 4.5 2.8 3.7 117 chr2R 22292060 5` UTR CR43422 + chr2R 22292118 5` UTR CR43422 + chr2R 22292177 5` UTR CR43422 + chr2R_14_22290001 chr2R_22290001 RAL-513 1010 chr2R 22306899 22306927 chr2R 22307048 22307084 14 159 6.0 6.0 6.0 2.0 185 chr2R 22306899 intron wdp - chr2R 22306992 intron wdp - chr2R 22307084 intron wdp - chr2R_14_22305001 chr2R_22305001 RAL-513 1011 chr2R 22349684 22349718 chr2R 22351474 22351522 jockey 12 1792 3.5 3.0 3.2 2.9 1838 chr2R 22349684 intron Liprin-gamma - chr2R 22350603 intron Liprin-gamma - chr2R 22351522 intron Liprin-gamma - chr2R_12_22350001 chr2R_22350001 RAL-513 1012 chr2R 22360367 22360380 chr2R 22360820 22360821 jockey 4 450 12.0 3.5 7.8 0.5 454 chr2R 22360367 intron Liprin-gamma - chr2R 22360594 intron Liprin-gamma - chr2R 22360821 intron Liprin-gamma - chr2R_4_22360001 chr2R_22360001 RAL-513 1013 chr2R 22362648 22362675 chr2R 22362744 22362774 7 97 3.5 3.5 3.5 1.6 126 chr2R 22362648 intron Liprin-gamma - chr2R 22362711 intron Liprin-gamma - chr2R 22362774 intron Liprin-gamma - chr2R_7_22360001 chr2R_22360001 RAL-513 1014 chr2R 22380354 22380357 chr2R 22380462 22380467 4 110 9.0 0.0 4.5 0.7 113 chr2R 22380354 intron wrapper + chr2R 22380410 intron wrapper + chr2R 22380467 intron wrapper + chr2R_4_22380001 chr2R_22380001 RAL-513 1015 chr2R 22471676 22471727 chr2R 22471773 22471824 13 91 6.5 3.5 5.0 2.2 148 chr2R 22471676 3` UTR CG10384 + chr2R 22471750 3` UTR CG10384 + chr2R 22471824 3` UTR CG10384 + chr2R_13_22470001 chr2R_22470001 RAL-513 1016 chr2R 22516000 22516042 chr2R 22516156 22516170 4 137 1.5 4.5 3.0 1.0 170 chr2R 22516000 intron px - chr2R 22516085 intron px - chr2R 22516170 intron px - chr2R_4_22515001 chr2R_22515001 RAL-513 1017 chr2R 22525739 22525781 chr2R 22529313 22529336 jockey 11 3567 3.5 6.0 4.8 1.9 3597 chr2R 22525739 intron px - chr2R 22527538 intron px - chr2R 22529336 intron px - chr2R_11_22525001 chr2R_22525001 RAL-513 1018 chr2R 22545604 22545645 chr2R 22545703 22545744 8 92 3.0 4.5 3.8 1.7 140 chr2R 22545604 intron px - chr2R 22545674 intron px - chr2R 22545744 intron px - chr2R_8_22545001 chr2R_22545001 RAL-513 1019 chr2R 22646450 22646469 chr2R 22646561 22646566 7 109 5.5 0.5 3.0 1.8 116 chr2R 22646450 intergenic CG2852 -,CG30195 - chr2R 22646508 intergenic CG30195 -,CG2852 - chr2R 22646566 intergenic CG30195 -,CG2852 - chr2R_7_22645001 chr2R_22645001 RAL-513 1020 chr2R 22654359 22654402 chr2R 22654460 22654502 7 100 1.5 9.5 5.5 1.1 143 chr2R 22654359 exon Cyp6d2 - chr2R 22654430 5` UTR Cyp6d2 - chr2R 22654502 5` UTR Cyp6d2 - chr2R_7_22650001 chr2R_22650001 RAL-513 1021 chr2R 22680606 22680617 chr2R 22680704 22680712 5 97 8.0 0.0 4.0 1.0 106 chr2R 22680606 intergenic not near genes chr2R 22680659 intergenic not near genes chr2R 22680712 intergenic not near genes chr2R_5_22680001 chr2R_22680001 RAL-513 1022 chr2R 22683752 22683801 chr2R 22683891 22683924 16 128 6.0 3.5 4.8 2.8 172 chr2R 22683752 intergenic not near genes chr2R 22683838 intergenic not near genes chr2R 22683924 intergenic not near genes chr2R_16_22680001 chr2R_22680001 RAL-513 1023 chr2R 22756624 22756645 chr2R 22756711 22756743 4 95 7.5 0.5 4.0 0.8 119 chr2R 22756624 intron,intron CG42260 -,CR30267 + chr2R 22756684 intron,intron CG42260 -,CR30267 + chr2R 22756743 intron,intron CG42260 -,CR30267 + chr2R_4_22755001 chr2R_22755001 RAL-513 1024 chr2R 22766481 22766509 chr2R 22766630 22766634 7 141 2.5 4.0 3.2 1.7 153 chr2R 22766481 intron CG42260 - chr2R 22766558 intron CG42260 - chr2R 22766634 intron CG42260 - chr2R_7_22765001 chr2R_22765001 RAL-513 1025 chr2R 22774947 22774994 chr2R 22775386 22775433 jockey 17 437 9.0 5.5 7.2 2.1 486 chr2R 22774947 intron CG42260 - chr2R 22775190 intron CG42260 - chr2R 22775433 intron CG42260 - chr2R_17_22775001 chr2R_22775001 RAL-513 1026 chr2R 22810548 22810602 chr2R 22810684 22810738 4 136 1.5 0.0 0.8 2.2 190 chr2R 22810548 intron stl + chr2R 22810643 intron stl + chr2R 22810738 intron stl + chr2R_4_22810001 chr2R_22810001 RAL-513 1027 chr2R 22843026 22843050 chr2R 22844989 22845030 flea 4 1974 6.0 6.0 6.0 0.6 2004 chr2R 22843026 intergenic CG9826 + chr2R 22844028 intergenic not near genes chr2R 22845030 intergenic not near genes chr2R_4_22840001 chr2R_22840001 RAL-513 1028 chr2R 22945039 22945082 chr2R 22945173 22945195 8 131 5.5 3.0 4.2 1.5 156 chr2R 22945039 exon CG42694 + chr2R 22945117 3` UTR CG42694 + chr2R 22945195 intergenic CG42694 + chr2R_8_22945001 chr2R_22945001 RAL-513 1029 chr2R 22957033 22957062 chr2R 22957132 22957159 7 95 2.5 5.0 3.8 1.5 126 chr2R 22957033 intergenic CR44780 - chr2R 22957096 intergenic CR44780 - chr2R 22957159 intergenic CR44780 - chr2R_7_22955001 chr2R_22955001 RAL-513 1030 chr2R 22978266 22978316 chr2R 22978363 22978416 7 98 1.5 4.5 3.0 1.8 150 chr2R 22978266 intergenic not near genes chr2R 22978341 intergenic not near genes chr2R 22978416 intergenic not near genes chr2R_7_22975001 chr2R_22975001 RAL-513 1031 chr2R 22982235 22982241 chr2R 22982304 22982338 5 90 2.0 2.5 2.2 1.6 103 chr2R 22982235 intergenic CG32834 - chr2R 22982286 intergenic CG32834 - chr2R 22982338 intergenic CG32834 - chr2R_5_22980001 chr2R_22980001 RAL-513 1032 chr2R 23061731 23061761 chr2R 23061840 23061876 13 132 2.5 4.0 3.2 3.1 145 chr2R 23061731 3` UTR l(2)06496 - chr2R 23061804 3` UTR l(2)06496 - chr2R 23061876 3` UTR l(2)06496 - chr2R_13_23060001 chr2R_23060001 RAL-513 1033 chr2R 23070401 23070440 chr2R 23070508 23070528 20 104 4.0 3.5 3.8 4.2 127 chr2R 23070401 intron l(2)k09913 + chr2R 23070464 intron l(2)k09913 + chr2R 23070528 intron l(2)k09913 + chr2R_20_23070001 chr2R_23070001 RAL-513 1034 chr2R 23115487 23115532 chr2R 23116021 23116066 8 533 3.0 3.0 3.0 2.0 579 chr2R 23115487 intergenic not near genes chr2R 23115776 intergenic not near genes chr2R 23116066 intergenic not near genes chr2R_8_23115001 chr2R_23115001 RAL-513 1035 chr2R 23122895 23122942 chr2R 23122995 23123044 7 96 3.5 1.5 2.5 2.0 149 chr2R 23122895 intergenic not near genes chr2R 23122970 intergenic not near genes chr2R 23123044 intergenic not near genes chr2R_7_23120001 chr2R_23120001 RAL-513 1036 chr2R 23138428 23138459 chr2R 23138531 23138564 11 104 7.0 2.5 4.8 1.9 136 chr2R 23138428 intergenic CG30192 + chr2R 23138496 intergenic CG30192 + chr2R 23138564 intergenic CG30192 + chr2R_11_23135001 chr2R_23135001 RAL-513 1037 chr2R 23186074 23186116 chr2R 23186238 23186281 6 164 3.0 5.5 4.2 1.2 207 chr2R 23186074 intron CG34371 - chr2R 23186178 intron CG34371 - chr2R 23186281 intron CG34371 - chr2R_6_23185001 chr2R_23185001 RAL-513 1038 chr2R 23275640 23275683 chr2R 23275745 23275776 7 100 2.0 4.0 3.0 1.8 136 chr2R 23275640 intergenic ord - chr2R 23275708 intergenic ord - chr2R 23275776 intergenic ord - chr2R_7_23275001 chr2R_23275001 RAL-513 1039 chr2R 23402588 23402636 chr2R 23407684 23407730 flea 14 5094 4.5 8.0 6.2 1.9 5142 chr2R 23402588 intergenic CG3520 - chr2R 23405159 intergenic not near genes chr2R 23407730 intergenic not near genes chr2R_14_23405001 chr2R_23405001 RAL-513 1040 chr2R 23421067 23421117 chr2R 23421163 23421212 15 96 3.0 4.5 3.8 3.1 145 chr2R 23421067 intergenic CG9815 - chr2R 23421140 intergenic CG9815 - chr2R 23421212 intergenic CG9815 - chr2R_15_23420001 chr2R_23420001 RAL-513 1041 chr2R 23437232 23437241 chr2R 23437312 23437313 5 80 3.0 5.0 4.0 1.0 81 chr2R 23437232 intergenic not near genes chr2R 23437272 intergenic not near genes chr2R 23437313 intergenic not near genes chr2R_5_23435001 chr2R_23435001 RAL-513 1042 chr2R 23481655 23481661 chr2R 23481760 23481766 4 106 0.0 8.0 4.0 0.8 111 chr2R 23481655 intron CG43795 + chr2R 23481710 intron CG43795 + chr2R 23481766 intron CG43795 + chr2R_4_23480001 chr2R_23480001 RAL-513 1043 chr2R 23481662 23481667 chr2R 23481745 23481774 5 101 0.0 6.5 3.2 1.2 112 chr2R 23481662 intron CG43795 + chr2R 23481718 intron CG43795 + chr2R 23481774 intron CG43795 + chr2R_5_23480001 chr2R_23480001 RAL-513 1044 chr2R 23487430 23487478 chr2R 23487531 23487550 13 96 5.5 7.0 6.2 1.8 120 chr2R 23487430 intron CG43795 + chr2R 23487490 intron CG43795 + chr2R 23487550 intron CG43795 + chr2R_13_23485001 chr2R_23485001 RAL-513 1045 chr2R 23508904 23508944 chr2R 23509041 23509081 10 134 1.5 3.0 2.2 3.1 177 chr2R 23508904 intergenic not near genes chr2R 23508992 intergenic not near genes chr2R 23509081 intergenic not near genes chr2R_10_23505001 chr2R_23505001 RAL-513 1046 chr2R 23512585 23512625 chr2R 23512865 23512908 5 272 0.5 1.5 1.0 2.5 323 chr2R 23512585 intergenic CG3906 - chr2R 23512746 intergenic not near genes chr2R 23512908 intergenic not near genes chr2R_5_23510001 chr2R_23510001 RAL-513 1047 chr2R 23553728 23553746 chr2R 23553837 23553855 7 110 6.5 7.0 6.8 0.9 127 chr2R 23553728 intron pita - chr2R 23553792 intron pita - chr2R 23553855 intron pita - chr2R_7_23550001 chr2R_23550001 RAL-513 1048 chr2R 23595886 23595925 chr2R 23595982 23596021 6 94 0.5 3.5 2.0 2.0 135 chr2R 23595886 intron apt + chr2R 23595954 intron apt + chr2R 23596021 intron apt + chr2R_6_23595001 chr2R_23595001 RAL-513 1049 chr2R 23607016 23607191 chr2R 23607117 23607293 12 104 4.0 5.0 4.5 2.2 277 chr2R 23607016 intron CG17664 - chr2R 23607154 intron CG17664 - chr2R 23607293 intron CG17664 - chr2R_12_23605001 chr2R_23605001 RAL-513 1050 chr2R 23636712 23636742 chr2R 23636797 23636821 11 94 3.0 1.5 2.2 3.4 109 chr2R 23636712 intron retn + chr2R 23636766 intron retn + chr2R 23636821 intron retn + chr2R_11_23635001 chr2R_23635001 RAL-513 1051 chr2R 23784453 23784505 chr2R 23784551 23784602 18 93 4.5 5.5 5.0 3.0 149 chr2R 23784453 intron CG9850 - chr2R 23784528 intron CG9850 - chr2R 23784602 intron CG9850 - chr2R_18_23780001 chr2R_23780001 RAL-513 1052 chr2R 23802275 23802307 chr2R 23802398 23802426 4 118 6.0 8.0 7.0 0.5 151 chr2R 23802275 3` UTR CG30177 + chr2R 23802350 3` UTR CG30177 + chr2R 23802426 3` UTR CG30177 + chr2R_4_23800001 chr2R_23800001 RAL-513 1053 chr2R 23824126 23824166 chr2R 23824223 23824277 5 108 4.0 0.5 2.2 1.6 151 chr2R 23824126 intron,intron CG5549 +,CG4763 - chr2R 23824202 intron,intron CG5549 +,CG4763 - chr2R 23824277 intron,intron CG5549 +,CG4763 - chr2R_5_23820001 chr2R_23820001 RAL-513 1054 chr2R 23914300 23914310 chr2R 23921944 23921945 412 4 7642 6.0 3.0 4.5 0.7 7645 chr2R 23914300 exon kcc + chr2R 23918122 intron kcc + chr2R 23921945 intron kcc + chr2R_4_23915001 chr2R_23915001 RAL-513 1055 chr2R 23914312 23914326 chr2R 23921935 23921963 412 4 7633 3.0 2.5 2.8 1.1 7651 chr2R 23914312 exon kcc + chr2R 23918138 intron kcc + chr2R 23921963 intron kcc + chr2R_4_23915001 chr2R_23915001 RAL-513 1056 chr2R 23994132 23994147 chr2R 23994228 23994240 4 95 7.0 3.5 5.2 0.6 108 chr2R 23994132 intron CG3860 - chr2R 23994186 intron CG3860 - chr2R 23994240 intron CG3860 - chr2R_4_23990001 chr2R_23990001 RAL-513 1057 chr2R 23994151 23994164 chr2R 23994227 23994249 7 87 3.5 3.0 3.2 1.7 98 chr2R 23994151 intron CG3860 - chr2R 23994200 intron CG3860 - chr2R 23994249 exon CG3860 - chr2R_7_23990001 chr2R_23990001 RAL-513 1058 chr2R 24008389 24008443 chr2R 24008495 24008549 18 102 5.5 7.5 6.5 2.4 160 chr2R 24008389 intron Unc-89 - chr2R 24008469 intron Unc-89 - chr2R 24008549 intron Unc-89 - chr2R_18_24005001 chr2R_24005001 RAL-513 1059 chr2R 24031364 24031398 chr2R 24031468 24031487 8 101 5.0 5.5 5.2 1.3 123 chr2R 24031364 5` UTR CG30172 - chr2R 24031426 5` UTR CG30172 - chr2R 24031487 intergenic Chi -,CG30172 - chr2R_8_24030001 chr2R_24030001 RAL-513 1060 chr2R 24031401 24031412 chr2R 24031466 24031516 4 94 3.0 5.5 4.2 0.8 115 chr2R 24031401 5` UTR CG30172 - chr2R 24031458 intergenic CG30172 -,Chi - chr2R 24031516 intergenic Chi -,CG30172 - chr2R_4_24030001 chr2R_24030001 RAL-513 1061 chr2R 24147057 24147092 chr2R 24154651 24154665 412 4 7582 1.5 7.0 4.2 0.8 7608 chr2R 24147057 intron Dat + chr2R 24150861 intron Dat + chr2R 24154665 intron Dat + chr2R_4_24150001 chr2R_24150001 RAL-513 1062 chr2R 24177214 24177269 chr2R 24184719 24184774 412 12 7496 2.0 0.5 1.2 5.5 7560 chr2R 24177214 3` UTR Nop60B + chr2R 24180994 intron Nop60B + chr2R 24184774 3` UTR Nop60B + chr2R_12_24180001 chr2R_24180001 RAL-513 1063 chr2R 24353423 24353448 chr2R 24361791 24361799 roo 10 8371 5.5 5.5 5.5 1.5 8376 chr2R 24353423 intron,intron bs +,CR44811 - chr2R 24357611 intron,intron bs +,CR44811 - chr2R 24361799 intron,intron bs +,CR44811 - chr2R_10_24355001 chr2R_24355001 RAL-513 1064 chr2R 24383807 24383851 chr2R 24383908 24383924 16 98 2.5 4.0 3.2 3.8 117 chr2R 24383807 intron mAChR-A - chr2R 24383866 intron mAChR-A - chr2R 24383924 exon mAChR-A - chr2R_16_24380001 chr2R_24380001 RAL-513 1065 chr2R 24415299 24415317 chr2R 24415402 24415419 7 104 11.0 6.0 8.5 0.7 120 chr2R 24415299 intergenic CG45068 +,CG45069 +,prom - chr2R 24415359 intergenic prom -,CG45068 +,CG45069 + chr2R 24415419 3` UTR prom - chr2R_7_24415001 chr2R_24415001 RAL-513 1066 chr2R 24415323 24415345 chr2R 24415400 24415450 9 98 4.5 6.0 5.2 1.5 127 chr2R 24415323 intergenic CG45068 +,CG45069 +,prom - chr2R 24415386 intergenic prom -,CG45068 +,CG45069 + chr2R 24415450 3` UTR prom - chr2R_9_24415001 chr2R_24415001 RAL-513 1067 chr2R 24430702 24430950 chr2R 24430850 24431051 13 108 0.0 0.0 0.0 13.0 349 chr2R 24430702 intergenic CG15873 - chr2R 24430876 intergenic CG15873 -,Pgam5-2 - chr2R 24431051 intergenic Pgam5-2 -,CG15873 - chr2R_13_24430001 chr2R_24430001 RAL-513 1068 chr2R 24442668 24442714 chr2R 24442821 24442866 15 148 4.5 2.5 3.5 3.3 198 chr2R 24442668 intergenic not near genes chr2R 24442767 intergenic not near genes chr2R 24442866 intergenic not near genes chr2R_15_24440001 chr2R_24440001 RAL-513 1069 chr2R 24456050 24456095 chr2R 24456150 24456195 13 96 5.0 2.5 3.8 2.7 145 chr2R 24456050 intron CG13579 + chr2R 24456122 intron CG13579 + chr2R 24456195 intron CG13579 + chr2R_13_24455001 chr2R_24455001 RAL-513 1070 chr2R 24513804 24513844 chr2R 24513889 24513939 16 94 2.0 3.5 2.8 4.2 135 chr2R 24513804 intron Letm1 - chr2R 24513872 intron Letm1 - chr2R 24513939 intron Letm1 - chr2R_16_24510001 chr2R_24510001 RAL-513 1071 chr2R 24590119 24590145 chr2R 24590208 24590233 6 89 2.0 4.0 3.0 1.5 114 chr2R 24590119 intron pio + chr2R 24590176 intron pio + chr2R 24590233 intron pio + chr2R_6_24590001 chr2R_24590001 RAL-513 1072 chr2R 24636892 24636909 chr2R 24636991 24637015 7 103 7.0 0.0 3.5 1.6 123 chr2R 24636892 intron CG13594 - chr2R 24636954 intron CG13594 - chr2R 24637015 intron CG13594 - chr2R_7_24635001 chr2R_24635001 RAL-513 1073 chr2R 24647571 24647582 chr2R 24655148 24655159 412 5 7577 13.0 5.5 9.2 0.5 7588 chr2R 24647571 intergenic not near genes chr2R 24651365 intergenic not near genes chr2R 24655159 intergenic not near genes chr2R_5_24650001 chr2R_24650001 RAL-513 1074 chr2R 24647591 24647618 chr2R 24655147 24655195 412 11 7567 4.0 5.5 4.8 1.9 7604 chr2R 24647591 intergenic not near genes chr2R 24651393 intergenic not near genes chr2R 24655195 intergenic not near genes chr2R_11_24650001 chr2R_24650001 RAL-513 1075 chr2R 24719797 24719825 chr2R 24719910 24719936 8 120 0.5 5.5 3.0 2.0 139 chr2R 24719797 intron Mid1 - chr2R 24719866 intron Mid1 - chr2R 24719936 intron Mid1 - chr2R_8_24715001 chr2R_24715001 RAL-513 1076 chr2R 24727867 24727918 chr2R 24735393 24735417 mdg1 7 7513 1.5 5.5 3.5 1.6 7550 chr2R 24727867 intron Mid1 - chr2R 24731642 intron Mid1 - chr2R 24735417 intron Mid1 - chr2R_7_24730001 chr2R_24730001 RAL-513 1077 chr2R 24763614 24763641 chr2R 24765585 24765617 G2 5 1974 3.0 1.5 2.2 1.6 2003 chr2R 24763614 exon CG3894 + chr2R 24764616 intron CG3894 + chr2R 24765617 exon CG3894 + chr2R_5_24760001 chr2R_24760001 RAL-513 1078 chr2R 24823804 24823833 chr2R 24823918 24823936 7 116 5.0 5.0 5.0 1.2 132 chr2R 24823804 intron Dll + chr2R 24823870 intron Dll + chr2R 24823936 intron Dll + chr2R_7_24820001 chr2R_24820001 RAL-513 1079 chr2R 24859835 24859870 chr2R 24859932 24859944 12 100 2.5 4.0 3.2 2.9 109 chr2R 24859835 5` UTR CR44829 + chr2R 24859890 5` UTR CR44829 + chr2R 24859944 5` UTR CR44829 + chr2R_12_24855001 chr2R_24855001 RAL-513 1080 chr2R 24884034 24884077 chr2R 24884136 24884179 14 99 6.0 2.5 4.2 2.7 145 chr2R 24884034 intron NKAIN + chr2R 24884106 intron NKAIN + chr2R 24884179 intron NKAIN + chr2R_14_24880001 chr2R_24880001 RAL-513 1081 chr2R 24939999 24940049 chr2R 24940409 24940457 21 402 5.0 3.5 4.2 4.0 458 chr2R 24939999 exon CG2811 - chr2R 24940228 exon CG2811 - chr2R 24940457 5` UTR CG2811 - chr2R_21_24940001 chr2R_24940001 RAL-513 1082 chr2R 25014532 25014575 chr2R 25014619 25014660 12 87 3.5 2.5 3.0 3.0 128 chr2R 25014532 intron uzip + chr2R 25014596 intron uzip + chr2R 25014660 intron uzip + chr2R_12_25010001 chr2R_25010001 RAL-513 1083 chr2R 25018322 25018359 chr2R 25018443 25018479 8 117 3.0 2.5 2.8 2.1 157 chr2R 25018322 intron uzip + chr2R 25018400 intron uzip + chr2R 25018479 intron uzip + chr2R_8_25015001 chr2R_25015001 RAL-513 1084 chr2R 25018363 25018371 chr2R 25018439 25018478 4 104 1.5 2.0 1.8 1.4 115 chr2R 25018363 intron uzip + chr2R 25018420 intron uzip + chr2R 25018478 intron uzip + chr2R_4_25015001 chr2R_25015001 RAL-513 1085 chr2R 25022620 25022673 chr2R 25022724 25022777 7 103 3.5 2.5 3.0 1.8 157 chr2R 25022620 intron uzip + chr2R 25022698 intron uzip + chr2R 25022777 intron uzip + chr2R_7_25020001 chr2R_25020001 RAL-513 1086 chr2R 25052007 25052047 chr2R 25052101 25052151 11 100 3.0 3.5 3.2 2.6 144 chr2R 25052007 exon gsb-n - chr2R 25052079 5` UTR gsb-n - chr2R 25052151 5` UTR gsb-n - chr2R_11_25050001 chr2R_25050001 RAL-513 1087 chr2R 25081603 25081609 chr2R 25082704 25082724 4 1106 5.5 5.5 5.5 0.6 1121 chr2R 25081603 intron gol - chr2R 25082164 intron gol - chr2R 25082724 intron gol - chr2R_4_25080001 chr2R_25080001 RAL-513 1088 chr2R 25081615 25081638 chr2R 25082702 25082729 6 1097 2.0 5.0 3.5 1.3 1114 chr2R 25081615 intron gol - chr2R 25082172 intron gol - chr2R 25082729 intron gol - chr2R_6_25080001 chr2R_25080001 RAL-513 1089 chr2R 25101256 25101306 chr2R 25101378 25101425 19 118 4.0 3.0 3.5 4.2 169 chr2R 25101256 intron lov - chr2R 25101340 intron lov - chr2R 25101425 intron lov - chr2R_19_25100001 chr2R_25100001 RAL-513 1090 chr2R 25104762 25104805 chr2R 25104906 25104941 8 141 6.0 6.0 6.0 1.1 179 chr2R 25104762 intron lov - chr2R 25104852 intron lov - chr2R 25104941 intron lov - chr2R_8_25100001 chr2R_25100001 RAL-513 1091 chr2R 25130996 25131033 chr2R 25131093 25131128 9 94 2.0 6.5 4.2 1.7 132 chr2R 25130996 intron lov - chr2R 25131062 intron lov - chr2R 25131128 intron lov - chr2R_9_25130001 chr2R_25130001 RAL-513 1092 chr2R 25141633 25141677 chr2R 25159342 25159386 roo 12 17708 6.0 4.0 5.0 2.0 17753 chr2R 25141633 intergenic not near genes chr2R 25150510 intergenic not near genes chr2R 25159386 intergenic not near genes chr2R_12_25150001 chr2R_25150001 RAL-513 1093 chr2R 25167664 25167700 chr2R 25167766 25167802 9 101 3.0 3.5 3.2 2.1 138 chr2R 25167664 5` UTR CG34038 + chr2R 25167733 5` UTR CG34038 + chr2R 25167802 5` UTR CG34038 + chr2R_9_25165001 chr2R_25165001 RAL-513 1094 chr2R 25201218 25201235 chr2R 25201364 25201380 8 144 7.5 2.5 5.0 1.3 162 chr2R 25201218 intron CG9380 - chr2R 25201299 intron CG9380 - chr2R 25201380 intron CG9380 - chr2R_8_25200001 chr2R_25200001 RAL-513 1095 chr2R 25201238 25201247 chr2R 25201363 25201386 5 136 4.5 2.0 3.2 1.2 148 chr2R 25201238 intron CG9380 - chr2R 25201312 intron CG9380 - chr2R 25201386 intron CG9380 - chr2R_5_25200001 chr2R_25200001 RAL-513 1096 chr3L 110192 110234 chr3L 119378 119420 roo 16 9183 4.0 6.0 5.0 2.7 9228 chr3L 110192 intergenic not near genes chr3L 114806 intergenic not near genes chr3L 119420 intergenic not near genes chr3L_16_110001 chr3L_110001 RAL-513 1097 chr3L 130200 130214 chr3L 130314 130328 4 114 0.0 0.0 0.0 4.0 128 chr3L 130200 intron Pdk1 + chr3L 130264 intron Pdk1 + chr3L 130328 intron Pdk1 + chr3L_4_130001 chr3L_130001 RAL-513 1098 chr3L 299337 299355 chr3L 299462 299481 6 125 10.0 6.5 8.2 0.7 144 chr3L 299337 intron RhoGEF3 + chr3L 299409 intron RhoGEF3 + chr3L 299481 intron RhoGEF3 + chr3L_6_295001 chr3L_295001 RAL-513 1099 chr3L 299356 299382 chr3L 299460 299492 12 119 5.0 6.0 5.5 1.8 136 chr3L 299356 intron RhoGEF3 + chr3L 299424 intron RhoGEF3 + chr3L 299492 intron RhoGEF3 + chr3L_12_295001 chr3L_295001 RAL-513 1100 chr3L 349428 349473 chr3L 349525 349569 12 88 7.0 8.0 7.5 1.4 141 chr3L 349428 intron Ptpmeg + chr3L 349498 intron Ptpmeg + chr3L 349569 intron Ptpmeg + chr3L_12_345001 chr3L_345001 RAL-513 1101 chr3L 380400 380448 chr3L 380777 380820 9 369 3.0 5.0 4.0 1.8 420 chr3L 380400 intron trh - chr3L 380610 intron trh - chr3L 380820 intron trh - chr3L_9_380001 chr3L_380001 RAL-513 1102 chr3L 402671 402678 chr3L 409744 409751 297 4 7072 10.0 7.0 8.5 0.4 7080 chr3L 402671 intergenic not near genes chr3L 406211 intergenic not near genes chr3L 409751 intergenic not near genes chr3L_4_405001 chr3L_405001 RAL-513 1103 chr3L 402686 402713 chr3L 409741 409786 297 9 7062 6.0 6.5 6.2 1.2 7100 chr3L 402686 intergenic not near genes chr3L 406236 intergenic not near genes chr3L 409786 intergenic not near genes chr3L_9_405001 chr3L_405001 RAL-513 1104 chr3L 437127 437149 chr3L 437253 437297 6 130 6.0 2.0 4.0 1.2 170 chr3L 437127 intron klar - chr3L 437212 intron klar - chr3L 437297 intron klar - chr3L_6_435001 chr3L_435001 RAL-513 1105 chr3L 438845 438876 chr3L 438937 438961 13 94 3.0 2.5 2.8 3.4 116 chr3L 438845 intron klar - chr3L 438903 intron klar - chr3L 438961 intron klar - chr3L_13_435001 chr3L_435001 RAL-513 1106 chr3L 456201 456222 chr3L 456296 456321 10 98 8.0 8.0 8.0 1.1 120 chr3L 456201 intron klar - chr3L 456261 intron klar - chr3L 456321 intron klar - chr3L_10_455001 chr3L_455001 RAL-513 1107 chr3L 456234 456239 chr3L 456292 456338 6 92 2.0 7.5 4.8 1.0 104 chr3L 456234 intron klar - chr3L 456286 intron klar - chr3L 456338 intron klar - chr3L_6_455001 chr3L_455001 RAL-513 1108 chr3L 459975 459979 chr3L 460063 460075 5 93 10.5 4.5 7.5 0.6 100 chr3L 459975 intron klar - chr3L 460025 intron klar - chr3L 460075 intron klar - chr3L_5_460001 chr3L_460001 RAL-513 1109 chr3L 459982 460006 chr3L 460058 460103 11 92 5.5 4.5 5.0 1.8 121 chr3L 459982 intron klar - chr3L 460042 intron klar - chr3L 460103 intron klar - chr3L_11_460001 chr3L_460001 RAL-513 1110 chr3L 467725 467774 chr3L 467829 467852 16 100 4.0 8.0 6.0 2.3 127 chr3L 467725 intron klar - chr3L 467788 intron klar - chr3L 467852 intron klar - chr3L_16_465001 chr3L_465001 RAL-513 1111 chr3L 515002 515016 chr3L 515100 515131 5 116 5.0 2.5 3.8 1.0 129 chr3L 515002 intron klar - chr3L 515066 intron klar - chr3L 515131 intron klar - chr3L_5_515001 chr3L_515001 RAL-513 1112 chr3L 523635 523673 chr3L 523780 523819 9 144 4.0 5.0 4.5 1.6 184 chr3L 523635 intron klar - chr3L 523727 intron klar - chr3L 523819 intron klar - chr3L_9_520001 chr3L_520001 RAL-513 1113 chr3L 526759 526808 chr3L 526859 526895 12 98 5.0 3.0 4.0 2.4 136 chr3L 526759 intron klar - chr3L 526827 intron klar - chr3L 526895 intron klar - chr3L_12_525001 chr3L_525001 RAL-513 1114 chr3L 592947 592964 chr3L 593043 593060 7 96 2.0 1.0 1.5 2.8 113 chr3L 592947 intergenic MED14 + chr3L 593004 intergenic MED14 + chr3L 593060 intergenic MED14 + chr3L_7_590001 chr3L_590001 RAL-513 1115 chr3L 606880 606923 chr3L 606976 607022 7 98 6.0 0.0 3.0 1.8 142 chr3L 606880 intergenic Reg-2 - chr3L 606951 intergenic Reg-2 - chr3L 607022 intergenic Reg-2 - chr3L_7_605001 chr3L_605001 RAL-513 1116 chr3L 651394 651424 chr3L 651489 651502 14 99 3.5 8.5 6.0 2.0 108 chr3L 651394 intergenic Gale +,CG3402 - chr3L 651448 intergenic CG3402 -,Gale + chr3L 651502 intergenic CG3402 -,Gale + chr3L_14_650001 chr3L_650001 RAL-513 1117 chr3L 705889 705928 chr3L 706005 706044 4 116 3.0 5.0 4.0 0.8 155 chr3L 705889 intergenic CG13895 -,CR44514 + chr3L 705966 3` UTR CG13895 - chr3L 706044 3` UTR CG13895 - chr3L_4_705001 chr3L_705001 RAL-513 1118 chr3L 824021 824042 chr3L 824122 824125 5 96 4.0 0.0 2.0 1.7 104 chr3L 824021 intergenic not near genes chr3L 824073 intergenic not near genes chr3L 824125 intergenic not near genes chr3L_5_820001 chr3L_820001 RAL-513 1119 chr3L 925180 925206 chr3L 932602 932652 mdg1 10 7438 4.5 4.5 4.5 1.8 7472 chr3L 925180 intron Glut1 + chr3L 928916 intron Glut1 + chr3L 932652 intron Glut1 + chr3L_10_925001 chr3L_925001 RAL-513 1120 chr3L 933890 933940 chr3L 934014 934034 14 119 1.0 2.5 1.8 5.0 144 chr3L 933890 intron Glut1 + chr3L 933962 intron Glut1 + chr3L 934034 intron Glut1 + chr3L_14_930001 chr3L_930001 RAL-513 1121 chr3L 939768 939803 chr3L 940892 940927 jockey 8 1136 6.0 6.0 6.0 1.1 1159 chr3L 939768 intron Glut1 + chr3L 940348 intron Glut1 + chr3L 940927 intron Glut1 + chr3L_8_940001 chr3L_940001 RAL-513 1122 chr3L 947598 947614 chr3L 947802 947818 4 204 6.5 5.0 5.8 0.6 220 chr3L 947598 intron Glut1 + chr3L 947708 intron Glut1 + chr3L 947818 intron Glut1 + chr3L_4_945001 chr3L_945001 RAL-513 1123 chr3L 947618 947650 chr3L 947801 947806 12 191 4.0 5.0 4.5 2.2 188 chr3L 947618 intron Glut1 + chr3L 947712 intron Glut1 + chr3L 947806 intron Glut1 + chr3L_12_945001 chr3L_945001 RAL-513 1124 chr3L 949886 949907 chr3L 949988 950012 7 102 7.0 2.5 4.8 1.2 126 chr3L 949886 intron Glut1 + chr3L 949949 intron Glut1 + chr3L 950012 intron Glut1 + chr3L_7_945001 chr3L_945001 RAL-513 1125 chr3L 949908 949923 chr3L 949976 950028 13 95 6.0 2.0 4.0 2.6 120 chr3L 949908 intron Glut1 + chr3L 949968 intron Glut1 + chr3L 950028 intron Glut1 + chr3L_13_945001 chr3L_945001 RAL-513 1126 chr3L 960426 960458 chr3L 960529 960580 12 118 3.5 1.5 2.5 3.4 154 chr3L 960426 intron Glut1 + chr3L 960503 intron Glut1 + chr3L 960580 intron Glut1 + chr3L_12_960001 chr3L_960001 RAL-513 1127 chr3L 1010987 1011023 chr3L 1011086 1011111 8 95 2.5 1.5 2.0 2.7 124 chr3L 1010987 intron trio - chr3L 1011049 intron trio - chr3L 1011111 intron trio - chr3L_8_1010001 chr3L_1010001 RAL-513 1128 chr3L 1015028 1015054 chr3L 1015141 1015181 8 109 2.5 4.0 3.2 1.9 153 chr3L 1015028 intron trio - chr3L 1015104 intron trio - chr3L 1015181 intron trio - chr3L_8_1015001 chr3L_1015001 RAL-513 1129 chr3L 1040533 1040581 chr3L 1040636 1040685 16 98 5.5 2.0 3.8 3.3 152 chr3L 1040533 intron bab1 - chr3L 1040609 intron bab1 - chr3L 1040685 intron bab1 - chr3L_16_1040001 chr3L_1040001 RAL-513 1130 chr3L 1089445 1089493 chr3L 1089573 1089619 14 126 5.5 8.0 6.8 1.8 174 chr3L 1089445 intron bab1 - chr3L 1089532 intron bab1 - chr3L 1089619 intron bab1 - chr3L_14_1085001 chr3L_1085001 RAL-513 1131 chr3L 1103968 1104012 chr3L 1104065 1104221 9 192 3.0 0.0 1.5 3.6 253 chr3L 1103968 intergenic not near genes chr3L 1104094 intergenic not near genes chr3L 1104221 intergenic not near genes chr3L_9_1100001 chr3L_1100001 RAL-513 1132 chr3L 1109648 1109658 chr3L 1109739 1109764 5 98 0.0 7.0 3.5 1.1 116 chr3L 1109648 intergenic not near genes chr3L 1109706 intergenic not near genes chr3L 1109764 intergenic not near genes chr3L_5_1105001 chr3L_1105001 RAL-513 1133 chr3L 1109659 1109667 chr3L 1109723 1109765 6 96 0.0 4.5 2.2 1.9 106 chr3L 1109659 intergenic not near genes chr3L 1109712 intergenic not near genes chr3L 1109765 intergenic not near genes chr3L_6_1105001 chr3L_1105001 RAL-513 1134 chr3L 1145235 1145267 chr3L 1145319 1145347 5 86 2.5 1.5 2.0 1.7 112 chr3L 1145235 intron bab2 - chr3L 1145291 intron bab2 - chr3L 1145347 intron bab2 - chr3L_5_1145001 chr3L_1145001 RAL-513 1135 chr3L 1154122 1154134 chr3L 1163292 1163304 roo 5 9170 9.0 4.5 6.8 0.6 9182 chr3L 1154122 intron bab2 - chr3L 1158713 intron bab2 - chr3L 1163304 intron bab2 - chr3L_5_1155001 chr3L_1155001 RAL-513 1136 chr3L 1219580 1219625 chr3L 1227327 1227375 412 17 7744 2.5 5.0 3.8 3.5 7795 chr3L 1219580 intron mwh + chr3L 1223478 intron mwh + chr3L 1227375 intron mwh + chr3L_17_1220001 chr3L_1220001 RAL-513 1137 chr3L 1268149 1268170 chr3L 1268348 1268360 5 200 3.5 0.5 2.0 1.7 211 chr3L 1268149 intron CG9134 + chr3L 1268254 intron CG9134 + chr3L 1268360 intron CG9134 + chr3L_5_1265001 chr3L_1265001 RAL-513 1138 chr3L 1285326 1285363 chr3L 1285429 1285475 4 101 0.0 2.0 1.0 2.0 149 chr3L 1285326 intron CG32333 + chr3L 1285400 intron CG32333 + chr3L 1285475 intron CG32333 + chr3L_4_1285001 chr3L_1285001 RAL-513 1139 chr3L 1310983 1310999 chr3L 1315842 1315871 6 4855 23.5 30.0 26.8 0.2 4888 chr3L 1310983 exon CG2469 + chr3L 1313427 intergenic CG9186 -,CG9153 + chr3L 1315871 exon CG9153 + chr3L_6_1310001 chr3L_1310001 RAL-513 1140 chr3L 1321548 1321584 chr3L 1321768 1321803 6 219 5.0 4.5 4.8 1.0 255 chr3L 1321548 intron Myo61F + chr3L 1321676 intron Myo61F + chr3L 1321803 intron,3` UTR Myo61F +,CG9184 - chr3L_6_1320001 chr3L_1320001 RAL-513 1141 chr3L 1323835 1323866 chr3L 1323926 1323974 8 101 0.5 2.0 1.2 3.6 139 chr3L 1323835 intron,intron Myo61F +,CR45166 - chr3L 1323904 intron,intron Myo61F +,CR45166 - chr3L 1323974 intron,3` UTR Myo61F +,CR45166 - chr3L_8_1320001 chr3L_1320001 RAL-513 1142 chr3L 1324633 1324658 chr3L 1324704 1324756 9 91 1.5 4.0 2.8 2.4 123 chr3L 1324633 intron Myo61F + chr3L 1324694 intron Myo61F + chr3L 1324756 intron Myo61F + chr3L_9_1320001 chr3L_1320001 RAL-513 1143 chr3L 1389974 1390006 chr3L 1390072 1390098 10 95 6.0 6.0 6.0 1.4 124 chr3L 1389974 intron Ptp61F - chr3L 1390036 intron Ptp61F - chr3L 1390098 intron Ptp61F - chr3L_10_1390001 chr3L_1390001 RAL-513 1144 chr3L 1394893 1394907 chr3L 1394966 1394983 5 89 3.0 3.5 3.2 1.2 90 chr3L 1394893 intron Ptp61F - chr3L 1394938 intron Ptp61F - chr3L 1394983 intron Ptp61F - chr3L_5_1390001 chr3L_1390001 RAL-513 1145 chr3L 1463401 1463448 chr3L 1463500 1463539 15 89 6.0 4.0 5.0 2.5 138 chr3L 1463401 intron Ptp61F - chr3L 1463470 intron Ptp61F - chr3L 1463539 intron Ptp61F - chr3L_15_1460001 chr3L_1460001 RAL-513 1146 chr3L 1505988 1506032 chr3L 1513596 1513623 17.6 12 7611 4.0 2.0 3.0 3.0 7635 chr3L 1505988 intron,intron Psa +,cue - chr3L 1509806 intron,intron Psa +,cue - chr3L 1513623 intron,intron Psa +,cue - chr3L_12_1505001 chr3L_1505001 RAL-513 1147 chr3L 1571227 1571484 chr3L 1571328 1571576 16 101 1.5 2.0 1.8 5.7 349 chr3L 1571227 intron CG12004 + chr3L 1571402 intron CG12004 + chr3L 1571576 intron CG12004 + chr3L_16_1570001 chr3L_1570001 RAL-513 1148 chr3L 1639209 1639237 chr3L 1639403 1639438 6 198 3.0 4.0 3.5 1.3 229 chr3L 1639209 5` UTR metl - chr3L 1639324 intergenic metl -,Bgb + chr3L 1639438 intergenic metl -,Bgb + chr3L_6_1635001 chr3L_1635001 RAL-513 1149 chr3L 1688234 1688240 chr3L 1688383 1688389 4 149 5.0 0.0 2.5 1.1 155 chr3L 1688234 intron CG7991 + chr3L 1688312 intron CG7991 + chr3L 1688389 intron CG7991 + chr3L_4_1685001 chr3L_1685001 RAL-513 1150 chr3L 1740845 1740885 chr3L 1741098 1741128 pogo 14 254 6.5 7.0 6.8 1.8 283 chr3L 1740845 intron Gk + chr3L 1740986 intron Gk + chr3L 1741128 intron Gk + chr3L_14_1740001 chr3L_1740001 RAL-513 1151 chr3L 1848643 1848667 chr3L 1848726 1848765 7 96 3.5 2.0 2.8 1.8 122 chr3L 1848643 intergenic not near genes chr3L 1848704 intergenic not near genes chr3L 1848765 intergenic not near genes chr3L_7_1845001 chr3L_1845001 RAL-513 1152 chr3L 1853030 1853041 chr3L 1853134 1853143 4 103 6.5 3.5 5.0 0.7 113 chr3L 1853030 intron CG13936 - chr3L 1853086 intron CG13936 - chr3L 1853143 intron CG13936 - chr3L_4_1850001 chr3L_1850001 RAL-513 1153 chr3L 1881541 1881546 chr3L 1881846 1881877 4 310 17.0 17.5 17.2 0.2 336 chr3L 1881541 5` UTR CG13937 - chr3L 1881709 intron CG13937 - chr3L 1881877 intron CG13937 - chr3L_4_1880001 chr3L_1880001 RAL-513 1154 chr3L 1905350 1905374 chr3L 1905464 1905487 4 114 3.0 8.5 5.8 0.6 137 chr3L 1905350 intron CG1887 - chr3L 1905418 intron CG1887 - chr3L 1905487 intron CG1887 - chr3L_4_1905001 chr3L_1905001 RAL-513 1155 chr3L 1924943 1924964 chr3L 1925101 1925122 5 158 3.5 3.0 3.2 1.2 179 chr3L 1924943 exon Dbx + chr3L 1925032 intron Dbx + chr3L 1925122 intron Dbx + chr3L_5_1925001 chr3L_1925001 RAL-513 1156 chr3L 1991129 1991152 chr3L 1991202 1991244 7 81 4.5 3.0 3.8 1.5 115 chr3L 1991129 intergenic not near genes chr3L 1991186 intergenic not near genes chr3L 1991244 intergenic not near genes chr3L_7_1990001 chr3L_1990001 RAL-513 1157 chr3L 2007404 2007453 chr3L 2007512 2007558 4 106 1.0 0.0 0.5 2.7 154 chr3L 2007404 intergenic not near genes chr3L 2007481 intergenic not near genes chr3L 2007558 intergenic not near genes chr3L_4_2005001 chr3L_2005001 RAL-513 1158 chr3L 2058587 2058595 chr3L 2058735 2058742 4 147 28.5 39.5 34.0 0.1 155 chr3L 2058587 exon sls - chr3L 2058664 exon sls - chr3L 2058742 exon sls - chr3L_4_2055001 chr3L_2055001 RAL-513 1159 chr3L 2058577 2058597 chr3L 2058755 2058780 10 158 30.0 36.5 33.2 0.3 203 chr3L 2058577 exon sls - chr3L 2058678 exon sls - chr3L 2058780 exon sls - chr3L_10_2055001 chr3L_2055001 RAL-513 1160 chr3L 2108232 2108279 chr3L 2113456 2113503 copia 6 5224 2.0 2.5 2.2 1.9 5271 chr3L 2108232 intron sls - chr3L 2110868 intron sls - chr3L 2113503 intron sls - chr3L_6_2110001 chr3L_2110001 RAL-513 1161 chr3L 2139190 2139225 chr3L 2139291 2139326 15 95 2.5 4.0 3.2 3.6 136 chr3L 2139190 intron zormin - chr3L 2139258 intron zormin - chr3L 2139326 intron zormin - chr3L_15_2135001 chr3L_2135001 RAL-513 1162 chr3L 2168767 2168800 chr3L 2168866 2168885 9 101 4.0 5.0 4.5 1.6 118 chr3L 2168767 exon CG15879 - chr3L 2168826 intron CG15879 - chr3L 2168885 intron CG15879 - chr3L_9_2165001 chr3L_2165001 RAL-513 1163 chr3L 2176671 2176710 chr3L 2177099 2177127 6 423 6.0 8.0 7.0 0.8 456 chr3L 2176671 intergenic not near genes chr3L 2176899 intergenic not near genes chr3L 2177127 intergenic not near genes chr3L_6_2175001 chr3L_2175001 RAL-513 1164 chr3L 2199794 2199821 chr3L 2199889 2199905 7 94 0.0 7.0 3.5 1.6 111 chr3L 2199794 intergenic not near genes chr3L 2199850 intergenic not near genes chr3L 2199905 intergenic not near genes chr3L_7_2195001 chr3L_2195001 RAL-513 1165 chr3L 2279016 2279068 chr3L 2279186 2279199 10 154 0.5 3.5 2.0 3.3 183 chr3L 2279016 intergenic not near genes chr3L 2279108 intergenic not near genes chr3L 2279199 intergenic not near genes chr3L_10_2275001 chr3L_2275001 RAL-513 1166 chr3L 2290260 2290275 chr3L 2290361 2290376 4 100 0.0 7.0 3.5 0.9 116 chr3L 2290260 intron MsR2 + chr3L 2290318 intron MsR2 + chr3L 2290376 intron MsR2 + chr3L_4_2290001 chr3L_2290001 RAL-513 1167 chr3L 2303025 2303055 chr3L 2303173 2303205 7 151 4.5 7.0 5.8 1.0 180 chr3L 2303025 intergenic not near genes chr3L 2303115 intergenic not near genes chr3L 2303205 intergenic not near genes chr3L_7_2300001 chr3L_2300001 RAL-513 1168 chr3L 2303553 2303575 chr3L 2303709 2303717 8 154 11.5 4.0 7.8 0.9 164 chr3L 2303553 intergenic not near genes chr3L 2303635 intergenic not near genes chr3L 2303717 intergenic not near genes chr3L_8_2300001 chr3L_2300001 RAL-513 1169 chr3L 2303578 2303597 chr3L 2303705 2303754 12 149 6.5 3.5 5.0 2.0 176 chr3L 2303578 intergenic not near genes chr3L 2303666 intergenic not near genes chr3L 2303754 intergenic not near genes chr3L_12_2300001 chr3L_2300001 RAL-513 1170 chr3L 2308001 2308031 chr3L 2308127 2308157 13 124 5.5 6.0 5.8 1.9 156 chr3L 2308001 intergenic not near genes chr3L 2308079 intergenic not near genes chr3L 2308157 intergenic not near genes chr3L_13_2305001 chr3L_2305001 RAL-513 1171 chr3L 2411318 2411343 chr3L 2411417 2411440 9 96 2.5 1.5 2.0 3.0 122 chr3L 2411318 intron CG45186 + chr3L 2411379 intron CG45186 + chr3L 2411440 intron CG45186 + chr3L_9_2410001 chr3L_2410001 RAL-513 1172 chr3L 2447514 2447534 chr3L 2456661 2456710 roo 8 9166 2.5 3.5 3.0 2.0 9196 chr3L 2447514 intron CG45186 + chr3L 2452112 intron CG45186 + chr3L 2456710 intron CG45186 + chr3L_8_2450001 chr3L_2450001 RAL-513 1173 chr3L 2469621 2469666 chr3L 2470065 2470081 13 438 5.5 5.5 5.5 2.0 460 chr3L 2469621 intron CG45186 + chr3L 2469851 intron CG45186 + chr3L 2470081 intron CG45186 + chr3L_13_2465001 chr3L_2465001 RAL-513 1174 chr3L 2493807 2493844 chr3L 2493904 2493951 5 100 2.0 0.0 1.0 2.5 144 chr3L 2493807 intron CG45186 + chr3L 2493879 intron CG45186 + chr3L 2493951 intron CG45186 + chr3L_5_2490001 chr3L_2490001 RAL-513 1175 chr3L 2533641 2533674 chr3L 2533742 2533775 6 101 7.0 5.5 6.2 0.8 134 chr3L 2533641 intron Spn - chr3L 2533708 intron Spn - chr3L 2533775 intron Spn - chr3L_6_2530001 chr3L_2530001 RAL-513 1176 chr3L 2591692 2591743 chr3L 2591798 2591850 9 98 1.5 3.5 2.5 2.6 158 chr3L 2591692 intron dos + chr3L 2591771 intron dos + chr3L 2591850 intron dos + chr3L_9_2590001 chr3L_2590001 RAL-513 1177 chr3L 2609660 2609679 chr3L 2609755 2609774 8 96 4.0 0.5 2.2 2.5 114 chr3L 2609660 intron Pxn - chr3L 2609717 intron Pxn - chr3L 2609774 intron Pxn - chr3L_8_2605001 chr3L_2605001 RAL-513 1178 chr3L 2617244 2617260 chr3L 2617350 2617355 6 102 3.5 4.0 3.8 1.2 111 chr3L 2617244 intron Pxn - chr3L 2617300 intron Pxn - chr3L 2617355 intron Pxn - chr3L_6_2615001 chr3L_2615001 RAL-513 1179 chr3L 2683926 2683966 chr3L 2684022 2684062 8 96 4.5 3.5 4.0 1.6 136 chr3L 2683926 intron Fife - chr3L 2683994 intron Fife - chr3L 2684062 intron Fife - chr3L_8_2680001 chr3L_2680001 RAL-513 1180 chr3L 2719530 2719559 chr3L 2719650 2719681 8 122 4.5 7.0 5.8 1.2 151 chr3L 2719530 3` UTR Mrtf - chr3L 2719606 3` UTR Mrtf - chr3L 2719681 3` UTR Mrtf - chr3L_8_2715001 chr3L_2715001 RAL-513 1181 chr3L 2751443 2751455 chr3L 2755757 2755770 F-element 5 4314 11.0 8.5 9.8 0.5 4327 chr3L 2751443 intron Mrtf - chr3L 2753606 intron Mrtf - chr3L 2755770 intron Mrtf - chr3L_5_2750001 chr3L_2750001 RAL-513 1182 chr3L 2795702 2795748 chr3L 2795845 2795891 14 140 3.5 2.0 2.8 3.7 189 chr3L 2795702 intron CG43444 - chr3L 2795796 intron CG43444 - chr3L 2795891 intron CG43444 - chr3L_14_2795001 chr3L_2795001 RAL-513 1183 chr3L 2835558 2835598 chr3L 2835655 2835695 10 93 6.5 3.5 5.0 1.7 137 chr3L 2835558 intron CG43444 - chr3L 2835626 intron CG43444 - chr3L 2835695 intron CG43444 - chr3L_10_2835001 chr3L_2835001 RAL-513 1184 chr3L 2835861 2835868 chr3L 2835969 2835975 4 108 2.5 8.5 5.5 0.6 114 chr3L 2835861 intron CG43444 - chr3L 2835918 intron CG43444 - chr3L 2835975 intron CG43444 - chr3L_4_2835001 chr3L_2835001 RAL-513 1185 chr3L 2899555 2899605 chr3L 2899687 2899738 13 127 3.0 5.0 4.0 2.6 183 chr3L 2899555 intron Shab + chr3L 2899646 intron Shab + chr3L 2899738 intron Shab + chr3L_13_2895001 chr3L_2895001 RAL-513 1186 chr3L 2927820 2927870 chr3L 2936117 2936166 Tirant 7 8295 2.5 2.5 2.5 2.0 8346 chr3L 2927820 intron Shab + chr3L 2931993 intron Shab + chr3L 2936166 intron Shab + chr3L_7_2930001 chr3L_2930001 RAL-513 1187 chr3L 2943065 2943099 chr3L 2943192 2943234 5 125 0.0 1.5 0.8 2.8 169 chr3L 2943065 intron Shab + chr3L 2943150 intron Shab + chr3L 2943234 intron Shab + chr3L_5_2940001 chr3L_2940001 RAL-513 1188 chr3L 2974321 2974339 chr3L 2974400 2974430 4 89 0.0 4.0 2.0 1.3 109 chr3L 2974321 intergenic not near genes chr3L 2974376 intergenic not near genes chr3L 2974430 intergenic not near genes chr3L_4_2970001 chr3L_2970001 RAL-513 1189 chr3L 2985276 2985313 chr3L 2985374 2985412 10 98 3.5 7.5 5.5 1.5 136 chr3L 2985276 intergenic not near genes chr3L 2985344 intergenic not near genes chr3L 2985412 intergenic not near genes chr3L_10_2985001 chr3L_2985001 RAL-513 1190 chr3L 3040303 3040341 chr3L 3042112 3042149 S-element 11 1806 6.5 3.0 4.8 1.9 1846 chr3L 3040303 3` UTR CG2162 + chr3L 3041226 intergenic not near genes chr3L 3042149 intergenic Jafrac2 + chr3L_11_3040001 chr3L_3040001 RAL-513 1191 chr3L 3050892 3050930 chr3L 3050986 3051037 10 100 4.0 0.5 2.2 3.1 145 chr3L 3050892 intron CG32485 + chr3L 3050964 intron CG32485 + chr3L 3051037 exon CG32485 + chr3L_10_3050001 chr3L_3050001 RAL-513 1192 chr3L 3281446 3281476 chr3L 3281949 3281969 Doc 4 498 1.0 10.5 5.8 0.6 523 chr3L 3281446 intron CG12017 + chr3L 3281708 intron CG12017 + chr3L 3281969 intron CG12017 + chr3L_4_3280001 chr3L_3280001 RAL-513 1193 chr3L 3284451 3284470 chr3L 3284524 3284553 6 87 3.0 4.5 3.8 1.2 102 chr3L 3284451 intron CG12017 + chr3L 3284502 intron CG12017 + chr3L 3284553 intron CG12017 + chr3L_6_3280001 chr3L_3280001 RAL-513 1194 chr3L 3335709 3335746 chr3L 3335874 3335911 11 163 6.0 2.5 4.2 2.1 202 chr3L 3335709 exon Drsl1 - chr3L 3335810 intergenic Drsl1 -,Drsl6 - chr3L 3335911 intergenic Drsl6 -,Drsl1 - chr3L_11_3335001 chr3L_3335001 RAL-513 1195 chr3L 3341247 3341291 chr3L 3341347 3341391 12 97 3.5 4.0 3.8 2.5 144 chr3L 3341247 intron kst + chr3L 3341319 intron kst + chr3L 3341391 intron kst + chr3L_12_3340001 chr3L_3340001 RAL-513 1196 chr3L 3475063 3475108 chr3L 3475526 3475557 jockey 9 458 3.0 5.5 4.2 1.7 494 chr3L 3475063 intron CG42324 + chr3L 3475310 intron CG42324 + chr3L 3475557 intron CG42324 + chr3L_9_3475001 chr3L_3475001 RAL-513 1197 chr3L 3494754 3494778 chr3L 3494851 3494861 4 93 5.5 8.5 7.0 0.5 107 chr3L 3494754 intron CG42324 + chr3L 3494808 intron CG42324 + chr3L 3494861 intron CG42324 + chr3L_4_3490001 chr3L_3490001 RAL-513 1198 chr3L 3512965 3512978 chr3L 3513046 3513060 5 90 1.5 2.5 2.0 1.7 95 chr3L 3512965 intergenic ImpE2 - chr3L 3513012 intergenic ImpE2 - chr3L 3513060 intergenic ImpE2 - chr3L_5_3510001 chr3L_3510001 RAL-513 1199 chr3L 3539968 3539988 chr3L 3540075 3540096 8 108 2.0 3.0 2.5 2.3 128 chr3L 3539968 intron Eip63E + chr3L 3540032 intron Eip63E + chr3L 3540096 intron Eip63E + chr3L_8_3540001 chr3L_3540001 RAL-513 1200 chr3L 3601294 3601328 chr3L 3606607 3606639 copia 7 5319 2.5 4.0 3.2 1.7 5345 chr3L 3601294 intron Eip63E + chr3L 3603966 intron Eip63E + chr3L 3606639 intron Eip63E + chr3L_7_3600001 chr3L_3600001 RAL-513 1201 chr3L 3627218 3627260 chr3L 3627343 3627385 9 125 1.5 2.5 2.0 3.0 167 chr3L 3627218 intron dar1 + chr3L 3627302 intron dar1 + chr3L 3627385 intron dar1 + chr3L_9_3625001 chr3L_3625001 RAL-513 1202 chr3L 3752942 3752992 chr3L 3753048 3753098 12 100 2.5 3.5 3.0 3.0 156 chr3L 3752942 intron CG32264 - chr3L 3753020 intron CG32264 - chr3L 3753098 intron CG32264 - chr3L_12_3750001 chr3L_3750001 RAL-513 1203 chr3L 3763736 3763767 chr3L 3763837 3763866 10 97 2.5 0.0 1.2 4.5 130 chr3L 3763736 intron CG32264 - chr3L 3763801 intron CG32264 - chr3L 3763866 intron CG32264 - chr3L_10_3760001 chr3L_3760001 RAL-513 1204 chr3L 3766717 3766736 chr3L 3766823 3766826 6 103 4.0 1.5 2.8 1.6 109 chr3L 3766717 intron CG32264 - chr3L 3766772 intron CG32264 - chr3L 3766826 intron CG32264 - chr3L_6_3765001 chr3L_3765001 RAL-513 1205 chr3L 3772436 3772478 chr3L 3772532 3772567 13 91 4.0 4.0 4.0 2.6 131 chr3L 3772436 intron CG32264 - chr3L 3772502 intron CG32264 - chr3L 3772567 intron CG32264 - chr3L_13_3770001 chr3L_3770001 RAL-513 1206 chr3L 3783255 3783286 chr3L 3783352 3783354 6 88 5.5 1.5 3.5 1.3 99 chr3L 3783255 intron CG32264 - chr3L 3783304 intron CG32264 - chr3L 3783354 intron CG32264 - chr3L_6_3780001 chr3L_3780001 RAL-513 1207 chr3L 3797223 3797253 chr3L 3797326 3797345 5 101 2.0 5.0 3.5 1.1 122 chr3L 3797223 intron CG32264 - chr3L 3797284 intron CG32264 - chr3L 3797345 intron CG32264 - chr3L_5_3795001 chr3L_3795001 RAL-513 1208 chr3L 3833720 3833769 chr3L 3833980 3834029 pogo 12 257 2.5 2.5 2.5 3.4 309 chr3L 3833720 intron enc + chr3L 3833874 intron enc + chr3L 3834029 intron enc + chr3L_12_3830001 chr3L_3830001 RAL-513 1209 chr3L 3877444 3877468 chr3L 3877587 3877602 7 141 0.0 3.0 1.5 2.8 158 chr3L 3877444 intergenic not near genes chr3L 3877523 intergenic not near genes chr3L 3877602 intergenic not near genes chr3L_7_3875001 chr3L_3875001 RAL-513 1210 chr3L 3890943 3890985 chr3L 3891043 3891086 10 100 2.5 0.5 1.5 4.0 143 chr3L 3890943 intergenic not near genes chr3L 3891014 intergenic not near genes chr3L 3891086 intergenic not near genes chr3L_10_3890001 chr3L_3890001 RAL-513 1211 chr3L 3913184 3913212 chr3L 3913281 3913309 10 97 2.5 3.5 3.0 2.5 125 chr3L 3913184 intron Eip63F-1 - chr3L 3913246 intron Eip63F-1 - chr3L 3913309 intron Eip63F-1 - chr3L_10_3910001 chr3L_3910001 RAL-513 1212 chr3L 4052231 4052264 chr3L 4052327 4052359 9 92 3.0 2.0 2.5 2.6 128 chr3L 4052231 intron CG1136 + chr3L 4052295 intron CG1136 + chr3L 4052359 intron CG1136 + chr3L_9_4050001 chr3L_4050001 RAL-513 1213 chr3L 4058823 4058873 chr3L 4058923 4058947 15 97 4.0 4.5 4.2 2.9 124 chr3L 4058823 3` UTR CG1136 + chr3L 4058885 3` UTR CG1136 + chr3L 4058947 3` UTR CG1136 + chr3L_15_4055001 chr3L_4055001 RAL-513 1214 chr3L 4099470 4099492 chr3L 4099571 4099593 5 99 4.5 2.0 3.2 1.2 123 chr3L 4099470 intron CG14995 - chr3L 4099532 intron CG14995 - chr3L 4099593 intron CG14995 - chr3L_5_4095001 chr3L_4095001 RAL-513 1215 chr3L 4146125 4146160 chr3L 4146234 4146265 8 106 1.0 3.5 2.2 2.5 140 chr3L 4146125 intergenic CG32260 + chr3L 4146195 intergenic CG32260 + chr3L 4146265 intergenic CG32260 + chr3L_8_4145001 chr3L_4145001 RAL-513 1216 chr3L 4209820 4209845 chr3L 4209918 4209943 10 97 1.0 2.5 1.8 3.6 123 chr3L 4209820 intron CG43367 + chr3L 4209882 intron CG43367 + chr3L 4209943 intron CG43367 + chr3L_10_4205001 chr3L_4205001 RAL-513 1217 chr3L 4328738 4328757 chr3L 4336254 4336274 412 4 7517 3.0 3.5 3.2 1.0 7536 chr3L 4328738 intron Cip4 - chr3L 4332506 intron Cip4 - chr3L 4336274 exon Cip4 - chr3L_4_4330001 chr3L_4330001 RAL-513 1218 chr3L 4342406 4342432 chr3L 4342488 4342531 7 91 4.5 1.0 2.8 1.8 125 chr3L 4342406 intron Cip4 - chr3L 4342468 intron Cip4 - chr3L 4342531 intron Cip4 - chr3L_7_4340001 chr3L_4340001 RAL-513 1219 chr3L 4344869 4345064 chr3L 4344996 4345160 15 107 0.0 0.0 0.0 15.0 291 chr3L 4344869 intron Cip4 - chr3L 4345014 intron Cip4 - chr3L 4345160 intron Cip4 - chr3L_15_4345001 chr3L_4345001 RAL-513 1220 chr3L 4385171 4385211 chr3L 4385344 4385352 11 166 3.0 2.0 2.5 3.1 181 chr3L 4385171 intron slow + chr3L 4385262 intron slow + chr3L 4385352 intron slow + chr3L_11_4385001 chr3L_4385001 RAL-513 1221 chr3L 4390010 4390036 chr3L 4390116 4390143 5 105 2.0 1.5 1.8 1.8 133 chr3L 4390010 intron slow + chr3L 4390076 intron slow + chr3L 4390143 intron slow + chr3L_5_4390001 chr3L_4390001 RAL-513 1222 chr3L 4422356 4422381 chr3L 4422434 4422477 6 91 1.5 4.0 2.8 1.6 121 chr3L 4422356 intron CG15020 + chr3L 4422416 intron CG15020 + chr3L 4422477 intron CG15020 + chr3L_6_4420001 chr3L_4420001 RAL-513 1223 chr3L 4580287 4580335 chr3L 4580391 4580422 11 100 3.5 5.5 4.5 2.0 135 chr3L 4580287 intron CG42540 + chr3L 4580354 intron CG42540 + chr3L 4580422 intron CG42540 + chr3L_11_4580001 chr3L_4580001 RAL-513 1224 chr3L 4607252 4607284 chr3L 4607363 4607394 6 106 4.5 5.0 4.8 1.0 142 chr3L 4607252 intron Src64B - chr3L 4607323 intron Src64B - chr3L 4607394 intron Src64B - chr3L_6_4605001 chr3L_4605001 RAL-513 1225 chr3L 4672960 4673004 chr3L 4673071 4673118 11 110 5.0 8.0 6.5 1.5 158 chr3L 4672960 intron axo - chr3L 4673039 intron axo - chr3L 4673118 intron axo - chr3L_11_4670001 chr3L_4670001 RAL-513 1226 chr3L 4775447 4775471 chr3L 4775545 4775565 7 98 3.5 1.5 2.5 2.0 118 chr3L 4775447 intron RhoGEF64C + chr3L 4775506 intron RhoGEF64C + chr3L 4775565 intron RhoGEF64C + chr3L_7_4775001 chr3L_4775001 RAL-513 1227 chr3L 4782086 4782122 chr3L 4782205 4782242 7 116 2.0 3.5 2.8 1.8 156 chr3L 4782086 intron RhoGEF64C + chr3L 4782164 intron RhoGEF64C + chr3L 4782242 intron RhoGEF64C + chr3L_7_4780001 chr3L_4780001 RAL-513 1228 chr3L 4858283 4858335 chr3L 4858393 4858423 17 97 5.5 5.0 5.2 2.7 140 chr3L 4858283 intergenic not near genes chr3L 4858353 intergenic not near genes chr3L 4858423 intergenic not near genes chr3L_17_4855001 chr3L_4855001 RAL-513 1229 chr3L 4927543 4927584 chr3L 4927768 4927780 10 221 3.0 5.5 4.2 1.9 237 chr3L 4927543 intergenic not near genes chr3L 4927662 intergenic not near genes chr3L 4927780 intergenic not near genes chr3L_10_4925001 chr3L_4925001 RAL-513 1230 chr3L 4941032 4941075 chr3L 4941360 4941388 9 326 3.0 1.5 2.2 2.8 356 chr3L 4941032 intron Con - chr3L 4941210 intron Con - chr3L 4941388 intron Con - chr3L_9_4940001 chr3L_4940001 RAL-513 1231 chr3L 5045436 5045484 chr3L 5050237 5050272 Doc 9 4796 5.5 5.0 5.2 1.5 4836 chr3L 5045436 intron Con - chr3L 5047854 intron Con - chr3L 5050272 intron Con - chr3L_9_5045001 chr3L_5045001 RAL-513 1232 chr3L 5203091 5203116 chr3L 5203206 5203241 7 121 1.0 3.5 2.2 2.2 150 chr3L 5203091 intron shep - chr3L 5203166 intron shep - chr3L 5203241 intron shep - chr3L_7_5200001 chr3L_5200001 RAL-513 1233 chr3L 5256679 5256724 chr3L 5256785 5256815 17 100 7.5 6.0 6.8 2.2 136 chr3L 5256679 intron shep - chr3L 5256747 intron shep - chr3L 5256815 intron shep - chr3L_17_5255001 chr3L_5255001 RAL-513 1234 chr3L 5299142 5299179 chr3L 5306598 5306635 Quasimodo 4 7454 2.5 2.5 2.5 1.1 7493 chr3L 5299142 intergenic not near genes chr3L 5302888 intergenic not near genes chr3L 5306635 intergenic not near genes chr3L_4_5300001 chr3L_5300001 RAL-513 1235 chr3L 5449527 5449550 chr3L 5449612 5449649 5 90 6.0 2.0 4.0 1.0 122 chr3L 5449527 intergenic not near genes chr3L 5449588 intergenic not near genes chr3L 5449649 intergenic not near genes chr3L_5_5445001 chr3L_5445001 RAL-513 1236 chr3L 5482939 5483092 chr3L 5483156 5483194 4 218 11.0 20.5 15.8 0.2 255 chr3L 5482939 exon CG4835 + chr3L 5483066 exon CG4835 + chr3L 5483194 exon CG4835 + chr3L_4_5480001 chr3L_5480001 RAL-513 1237 chr3L 5498368 5498431 chr3L 5498477 5498528 6 99 1.0 3.0 2.0 2.0 160 chr3L 5498368 exon blanks - chr3L 5498448 exon blanks - chr3L 5498528 exon blanks - chr3L_6_5495001 chr3L_5495001 RAL-513 1238 chr3L 5514727 5514763 chr3L 5514823 5514860 7 96 7.0 5.5 6.2 1.0 133 chr3L 5514727 intron Lkr - chr3L 5514794 intron Lkr - chr3L 5514860 intron Lkr - chr3L_7_5510001 chr3L_5510001 RAL-513 1239 chr3L 5531595 5531645 chr3L 5532253 5532303 12 653 11.5 12.5 12.0 0.9 708 chr3L 5531595 intergenic not near genes chr3L 5531949 intergenic not near genes chr3L 5532303 intergenic not near genes chr3L_12_5530001 chr3L_5530001 RAL-513 1240 chr3L 5537144 5537167 chr3L 5537269 5537294 6 127 10.5 6.0 8.2 0.7 150 chr3L 5537144 intergenic not near genes chr3L 5537219 intergenic not near genes chr3L 5537294 intergenic not near genes chr3L_6_5535001 chr3L_5535001 RAL-513 1241 chr3L 5537724 5537735 chr3L 5538086 5538093 jockey 4 361 6.5 6.5 6.5 0.5 369 chr3L 5537724 intergenic not near genes chr3L 5537908 intergenic not near genes chr3L 5538093 intergenic CG10625 - chr3L_4_5535001 chr3L_5535001 RAL-513 1242 chr3L 5558347 5558379 chr3L 5558448 5558485 5 104 19.5 17.0 18.2 0.3 138 chr3L 5558347 intergenic not near genes chr3L 5558416 intergenic not near genes chr3L 5558485 intergenic not near genes chr3L_5_5555001 chr3L_5555001 RAL-513 1243 chr3L 5613478 5613493 chr3L 5613625 5613640 5 146 3.5 3.5 3.5 1.1 162 chr3L 5613478 intergenic not near genes chr3L 5613559 intergenic not near genes chr3L 5613640 intergenic not near genes chr3L_5_5610001 chr3L_5610001 RAL-513 1244 chr3L 5666927 5666961 chr3L 5667025 5667060 7 93 9.0 6.0 7.5 0.8 133 chr3L 5666927 intron sif + chr3L 5666994 intron sif + chr3L 5667060 intron sif + chr3L_7_5665001 chr3L_5665001 RAL-513 1245 chr3L 5926335 5926347 chr3L 5926511 5926536 BS 6 197 5.0 6.0 5.5 0.9 201 chr3L 5926335 intron Vap-33B + chr3L 5926436 intron Vap-33B + chr3L 5926536 intron Vap-33B + chr3L_6_5925001 chr3L_5925001 RAL-513 1246 chr3L 6001665 6001706 chr3L 6004385 6004420 jockey 9 2714 4.5 2.0 3.2 2.1 2755 chr3L 6001665 intron PVRAP + chr3L 6003042 intron PVRAP + chr3L 6004420 intron PVRAP + chr3L_9_6000001 chr3L_6000001 RAL-513 1247 chr3L 6040349 6040394 chr3L 6042724 6042770 Doc 12 2375 3.0 6.5 4.8 2.1 2421 chr3L 6040349 intergenic Jon65Aiv + chr3L 6041560 intergenic not near genes chr3L 6042770 intergenic not near genes chr3L_12_6040001 chr3L_6040001 RAL-513 1248 chr3L 6052127 6052152 chr3L 6052233 6052253 9 102 0.0 5.0 2.5 2.6 126 chr3L 6052127 intergenic Jon65Aii +,Jon65Aiii + chr3L 6052190 intergenic Jon65Aii +,Jon65Aiii + chr3L 6052253 intergenic Jon65Aii + chr3L_9_6050001 chr3L_6050001 RAL-513 1249 chr3L 6052640 6052665 chr3L 6052745 6052755 4 99 5.0 9.0 7.0 0.5 115 chr3L 6052640 exon Jon65Aii + chr3L 6052698 intron Jon65Aii + chr3L 6052755 exon Jon65Aii + chr3L_4_6050001 chr3L_6050001 RAL-513 1250 chr3L 6064999 6065042 chr3L 6065095 6065139 4 97 4.0 4.0 4.0 0.8 140 chr3L 6064999 intergenic not near genes chr3L 6065069 intergenic not near genes chr3L 6065139 intergenic not near genes chr3L_4_6065001 chr3L_6065001 RAL-513 1251 chr3L 6119122 6119172 chr3L 6119218 6119269 4 97 1.5 0.5 1.0 2.0 147 chr3L 6119122 exon Ets65A + chr3L 6119196 intron Ets65A + chr3L 6119269 intron Ets65A + chr3L_4_6115001 chr3L_6115001 RAL-513 1252 chr3L 6132476 6132512 chr3L 6132575 6132583 4 92 5.0 3.0 4.0 0.8 107 chr3L 6132476 intergenic Cpr65Au - chr3L 6132530 intergenic Cpr65Au -,Lcp65Ag2 - chr3L 6132583 intergenic Lcp65Ag2 -,Cpr65Au - chr3L_4_6130001 chr3L_6130001 RAL-513 1253 chr3L 6155676 6155707 chr3L 6155780 6155796 8 103 6.0 3.0 4.5 1.5 120 chr3L 6155676 intergenic CR45421 - chr3L 6155736 intergenic not near genes chr3L 6155796 intergenic not near genes chr3L_8_6155001 chr3L_6155001 RAL-513 1254 chr3L 6220897 6220947 chr3L 6230069 6230113 roo 12 9170 5.0 2.5 3.8 2.5 9216 chr3L 6220897 5` UTR pncr008:3L + chr3L 6225505 intergenic not near genes chr3L 6230113 intergenic not near genes chr3L_12_6225001 chr3L_6225001 RAL-513 1255 chr3L 6335028 6335036 chr3L 6335504 6335524 297 6 484 6.5 8.5 7.5 0.7 496 chr3L 6335028 intron CG13300 - chr3L 6335276 intron CG13300 - chr3L 6335524 intron CG13300 - chr3L_6_6335001 chr3L_6335001 RAL-513 1256 chr3L 6401257 6401292 chr3L 6401355 6401391 11 96 12.5 9.0 10.8 0.9 134 chr3L 6401257 intron CG42747 + chr3L 6401324 intron CG42747 + chr3L 6401391 intron CG42747 + chr3L_11_6400001 chr3L_6400001 RAL-513 1257 chr3L 6401293 6401308 chr3L 6401353 6401407 6 87 10.5 9.5 10.0 0.5 114 chr3L 6401293 intron CG42747 + chr3L 6401350 intron CG42747 + chr3L 6401407 intron CG42747 + chr3L_6_6400001 chr3L_6400001 RAL-513 1258 chr3L 6405644 6405660 chr3L 6432128 6432144 roo 5 26483 4.0 5.0 4.5 0.9 26500 chr3L 6405644 intron CG42747 + chr3L 6418894 intron CG42747 + chr3L 6432144 intron CG42747 + chr3L_5_6415001 chr3L_6415001 RAL-513 1259 chr3L 6569420 6569467 chr3L 6569525 6569571 7 104 7.0 2.5 4.8 1.2 151 chr3L 6569420 intron,intron CG18769 +,jv - chr3L 6569496 intron,intron CG18769 +,jv - chr3L 6569571 intron,intron CG18769 +,jv - chr3L_7_6565001 chr3L_6565001 RAL-513 1260 chr3L 6642866 6643165 chr3L 6642966 6643254 9 102 6.0 1.0 3.5 2.0 388 chr3L 6642866 intergenic CR45239 + chr3L 6643060 intergenic CR45239 + chr3L 6643254 intergenic CR45239 + chr3L_9_6640001 chr3L_6640001 RAL-513 1261 chr3L 6643167 6643172 chr3L 6643247 6643280 5 97 4.0 4.5 4.2 1.0 113 chr3L 6643167 intergenic CR45239 + chr3L 6643224 intergenic CR45239 + chr3L 6643280 intergenic CR45239 + chr3L_5_6640001 chr3L_6640001 RAL-513 1262 chr3L 6654230 6654251 chr3L 6654470 6654505 6 255 2.5 5.0 3.8 1.2 275 chr3L 6654230 intergenic not near genes chr3L 6654368 intergenic not near genes chr3L 6654505 intergenic not near genes chr3L_6_6650001 chr3L_6650001 RAL-513 1263 chr3L 6781104 6781147 chr3L 6783136 6783178 Doc 8 2031 6.5 4.0 5.2 1.3 2074 chr3L 6781104 intergenic not near genes chr3L 6782141 intergenic not near genes chr3L 6783178 intergenic not near genes chr3L_8_6780001 chr3L_6780001 RAL-513 1264 chr3L 6855914 6855955 chr3L 6860718 6860740 Doc 8 4801 3.0 3.0 3.0 2.0 4826 chr3L 6855914 intergenic not near genes chr3L 6858327 intergenic not near genes chr3L 6860740 intergenic not near genes chr3L_8_6855001 chr3L_6855001 RAL-513 1265 chr3L 6887501 6887533 chr3L 6895013 6895041 roo 12 7510 6.0 3.0 4.5 2.2 7540 chr3L 6887501 intergenic not near genes chr3L 6891271 intergenic not near genes chr3L 6895041 intergenic not near genes chr3L_12_6890001 chr3L_6890001 RAL-513 1266 chr3L 6934323 6934362 chr3L 6934452 6934479 8 126 5.0 4.0 4.5 1.5 156 chr3L 6934323 exon CG14820 + chr3L 6934401 intron CG14820 + chr3L 6934479 intron CG14820 + chr3L_8_6930001 chr3L_6930001 RAL-513 1267 chr3L 6974508 6974515 chr3L 6974592 6974636 5 113 3.5 4.5 4.0 1.0 128 chr3L 6974508 intron Galphai - chr3L 6974572 intron Galphai - chr3L 6974636 intron Galphai - chr3L_5_6970001 chr3L_6970001 RAL-513 1268 chr3L 6994872 6994909 chr3L 6995503 6995539 BS 6 630 3.0 5.5 4.2 1.2 667 chr3L 6994872 intergenic bin + chr3L 6995206 intergenic not near genes chr3L 6995539 intergenic not near genes chr3L_6_6995001 chr3L_6995001 RAL-513 1269 chr3L 7079787 7079832 chr3L 7079918 7079964 10 130 6.0 7.0 6.5 1.3 177 chr3L 7079787 intergenic not near genes chr3L 7079876 intergenic not near genes chr3L 7079964 intergenic not near genes chr3L_10_7075001 chr3L_7075001 RAL-513 1270 chr3L 7100160 7100180 chr3L 7100254 7100276 7 95 5.0 3.0 4.0 1.4 116 chr3L 7100160 intron form3 + chr3L 7100218 intron form3 + chr3L 7100276 intron form3 + chr3L_7_7100001 chr3L_7100001 RAL-513 1271 chr3L 7112577 7112603 chr3L 7112674 7112710 8 99 2.0 4.5 3.2 1.9 133 chr3L 7112577 intron form3 + chr3L 7112644 intron form3 + chr3L 7112710 intron form3 + chr3L_8_7110001 chr3L_7110001 RAL-513 1272 chr3L 7150874 7150901 chr3L 7150950 7150997 5 87 2.0 3.5 2.8 1.3 123 chr3L 7150874 intron corn - chr3L 7150936 intron corn - chr3L 7150997 intron corn - chr3L_5_7150001 chr3L_7150001 RAL-513 1273 chr3L 7201575 7201587 chr3L 7201847 7201859 5 271 7.5 6.5 7.0 0.6 284 chr3L 7201575 intergenic not near genes chr3L 7201717 intergenic not near genes chr3L 7201859 intergenic not near genes chr3L_5_7200001 chr3L_7200001 RAL-513 1274 chr3L 7201589 7201609 chr3L 7201832 7201879 16 263 4.5 4.0 4.2 3.1 290 chr3L 7201589 intergenic not near genes chr3L 7201734 intergenic not near genes chr3L 7201879 intergenic not near genes chr3L_16_7200001 chr3L_7200001 RAL-513 1275 chr3L 7264873 7264884 chr3L 7264976 7264987 4 103 0.0 3.0 1.5 1.6 114 chr3L 7264873 intergenic not near genes chr3L 7264930 intergenic not near genes chr3L 7264987 intergenic not near genes chr3L_4_7260001 chr3L_7260001 RAL-513 1276 chr3L 7277087 7277135 chr3L 7277209 7277257 12 121 4.5 2.0 3.2 2.9 170 chr3L 7277087 exon unc-13-4A - chr3L 7277172 intron unc-13-4A - chr3L 7277257 intron unc-13-4A - chr3L_12_7275001 chr3L_7275001 RAL-513 1277 chr3L 7288391 7288408 chr3L 7288482 7288511 4 101 0.0 10.5 5.2 0.6 120 chr3L 7288391 intron unc-13-4A - chr3L 7288451 intron unc-13-4A - chr3L 7288511 intron unc-13-4A - chr3L_4_7285001 chr3L_7285001 RAL-513 1278 chr3L 7308167 7308221 chr3L 7308263 7308308 19 91 4.0 5.5 4.8 3.3 141 chr3L 7308167 intron unc-13-4A - chr3L 7308238 intron unc-13-4A - chr3L 7308308 intron unc-13-4A - chr3L_19_7305001 chr3L_7305001 RAL-513 1279 chr3L 7318166 7318216 chr3L 7318278 7318318 13 108 3.5 2.5 3.0 3.2 152 chr3L 7318166 intergenic not near genes chr3L 7318242 intergenic not near genes chr3L 7318318 intergenic not near genes chr3L_13_7315001 chr3L_7315001 RAL-513 1280 chr3L 7393132 7393154 chr3L 7393301 7393330 9 182 6.0 2.0 4.0 1.8 198 chr3L 7393132 intron CG8563 + chr3L 7393231 intron CG8563 + chr3L 7393330 intron CG8563 + chr3L_9_7390001 chr3L_7390001 RAL-513 1281 chr3L 7426004 7426014 chr3L 7426405 7426415 6 401 12.5 6.0 9.2 0.6 411 chr3L 7426004 intron CG42458 + chr3L 7426210 intron CG42458 + chr3L 7426415 intron CG42458 + chr3L_6_7425001 chr3L_7425001 RAL-513 1282 chr3L 7426019 7426040 chr3L 7426397 7426441 11 396 7.5 5.0 6.2 1.5 422 chr3L 7426019 intron CG42458 + chr3L 7426230 intron CG42458 + chr3L 7426441 intron CG42458 + chr3L_11_7425001 chr3L_7425001 RAL-513 1283 chr3L 7449450 7449455 chr3L 7449529 7449553 4 88 0.0 8.5 4.2 0.8 103 chr3L 7449450 intron CG42458 + chr3L 7449502 intron CG42458 + chr3L 7449553 intron CG42458 + chr3L_4_7445001 chr3L_7445001 RAL-513 1284 chr3L 7451377 7451417 chr3L 7451472 7451523 11 96 2.5 3.5 3.0 2.8 146 chr3L 7451377 intron,exon CG42458 +,CG33278 + chr3L 7451450 intron,exon CG42458 +,CG33278 + chr3L 7451523 intron,exon CG42458 +,CG33278 + chr3L_11_7450001 chr3L_7450001 RAL-513 1285 chr3L 7505396 7505439 chr3L 7505492 7505534 5 95 4.5 3.5 4.0 1.0 138 chr3L 7505396 intergenic CG7548 - chr3L 7505465 intergenic CG7548 - chr3L 7505534 intergenic CG7548 - chr3L_5_7505001 chr3L_7505001 RAL-513 1286 chr3L 7520982 7521031 chr3L 7521088 7521116 15 99 6.0 7.0 6.5 2.0 134 chr3L 7520982 intron ltl + chr3L 7521049 intron ltl + chr3L 7521116 intron ltl + chr3L_15_7520001 chr3L_7520001 RAL-513 1287 chr3L 7524134 7524169 chr3L 7524230 7524271 6 98 4.0 0.0 2.0 2.0 137 chr3L 7524134 intron ltl + chr3L 7524202 intron ltl + chr3L 7524271 intron ltl + chr3L_6_7520001 chr3L_7520001 RAL-513 1288 chr3L 7568930 7568949 chr3L 7569027 7569048 8 96 5.0 2.0 3.5 1.8 118 chr3L 7568930 exon frac + chr3L 7568989 intron frac + chr3L 7569048 intron frac + chr3L_8_7565001 chr3L_7565001 RAL-513 1289 chr3L 7568953 7568979 chr3L 7569023 7569079 7 89 3.0 2.0 2.5 2.0 126 chr3L 7568953 exon frac + chr3L 7569016 intron frac + chr3L 7569079 exon frac + chr3L_7_7565001 chr3L_7565001 RAL-513 1290 chr3L 7575280 7575311 chr3L 7575366 7575404 9 95 3.0 4.5 3.8 1.9 124 chr3L 7575280 intergenic not near genes chr3L 7575342 intergenic not near genes chr3L 7575404 intergenic not near genes chr3L_9_7575001 chr3L_7575001 RAL-513 1291 chr3L 7576223 7576243 chr3L 7576302 7576344 8 97 5.0 1.0 3.0 2.0 121 chr3L 7576223 intergenic not near genes chr3L 7576284 intergenic not near genes chr3L 7576344 intergenic not near genes chr3L_8_7575001 chr3L_7575001 RAL-513 1292 chr3L 7581624 7581652 chr3L 7581714 7581753 5 100 3.5 3.5 3.5 1.1 129 chr3L 7581624 intergenic not near genes chr3L 7581688 intergenic not near genes chr3L 7581753 intergenic not near genes chr3L_5_7580001 chr3L_7580001 RAL-513 1293 chr3L 7591128 7591181 chr3L 7591239 7591271 7 101 4.0 4.5 4.2 1.3 143 chr3L 7591128 intergenic CG7716 - chr3L 7591200 intergenic CG7716 - chr3L 7591271 intergenic CG7716 - chr3L_7_7590001 chr3L_7590001 RAL-513 1294 chr3L 7640696 7640745 chr3L 7640839 7640889 13 141 4.0 5.5 4.8 2.2 193 chr3L 7640696 intergenic CG7506 -,CG33276 - chr3L 7640792 intergenic CG7506 -,CG33276 - chr3L 7640889 exon CG7506 - chr3L_13_7640001 chr3L_7640001 RAL-513 1295 chr3L 7793695 7793742 chr3L 7800767 7800804 297 13 7071 4.5 9.5 7.0 1.6 7109 chr3L 7793695 intron CG32369 - chr3L 7797250 intron CG32369 - chr3L 7800804 intron CG32369 - chr3L_13_7795001 chr3L_7795001 RAL-513 1296 chr3L 7822285 7822308 chr3L 7822403 7822426 5 118 1.0 1.0 1.0 2.5 141 chr3L 7822285 intron Pdp1 - chr3L 7822356 intron Pdp1 - chr3L 7822426 intron Pdp1 - chr3L_5_7820001 chr3L_7820001 RAL-513 1297 chr3L 7842683 7842722 chr3L 7842859 7842866 6 166 6.0 0.5 3.2 1.4 183 chr3L 7842683 intron Pdp1 - chr3L 7842774 intron Pdp1 - chr3L 7842866 intron Pdp1 - chr3L_6_7840001 chr3L_7840001 RAL-513 1298 chr3L 7875052 7875062 chr3L 7876870 7876912 4 1842 7.0 18.0 12.5 0.3 1860 chr3L 7875052 intron CG32365 + chr3L 7875982 intron CG32365 + chr3L 7876912 intron CG32365 + chr3L_4_7875001 chr3L_7875001 RAL-513 1299 chr3L 7886495 7886547 chr3L 7889033 7889085 Stalker4 12 2537 3.0 3.0 3.0 3.0 2590 chr3L 7886495 intron CG32365 + chr3L 7887790 intron CG32365 + chr3L 7889085 intron CG32365 + chr3L_12_7885001 chr3L_7885001 RAL-513 1300 chr3L 7916818 7916825 chr3L 7926009 7926016 roo 4 9191 6.0 2.5 4.2 0.8 9198 chr3L 7916818 3` UTR syd - chr3L 7921417 intron syd - chr3L 7926016 3` UTR syd - chr3L_4_7920001 chr3L_7920001 RAL-513 1301 chr3L 7970302 7970345 chr3L 7970409 7970451 7 104 5.0 2.5 3.8 1.5 149 chr3L 7970302 intergenic RNaseX25 + chr3L 7970376 intergenic RNaseX25 + chr3L 7970451 intergenic RNaseX25 + chr3L_7_7970001 chr3L_7970001 RAL-513 1302 chr3L 7985356 7985367 chr3L 7987697 7987707 NOF 4 2341 8.0 5.5 6.8 0.5 2351 chr3L 7985356 intron nmo + chr3L 7986532 intron nmo + chr3L 7987707 intron nmo + chr3L_4_7985001 chr3L_7985001 RAL-513 1303 chr3L 7985368 7985401 chr3L 7987690 7987693 NOF 8 2333 1.5 5.0 3.2 1.9 2325 chr3L 7985368 intron nmo + chr3L 7986530 intron nmo + chr3L 7987693 intron nmo + chr3L_8_7985001 chr3L_7985001 RAL-513 1304 chr3L 7995346 7995362 chr3L 7995507 7995546 4 178 1.5 4.5 3.0 1.0 200 chr3L 7995346 intron nmo + chr3L 7995446 intron nmo + chr3L 7995546 intron nmo + chr3L_4_7995001 chr3L_7995001 RAL-513 1305 chr3L 8019684 8019735 chr3L 8024117 8024167 NOF 9 4420 2.5 3.0 2.8 2.4 4483 chr3L 8019684 intron nmo + chr3L 8021926 intron nmo + chr3L 8024167 intron nmo + chr3L_9_8020001 chr3L_8020001 RAL-513 1306 chr3L 8051297 8051341 chr3L 8051390 8051438 6 90 1.5 2.5 2.0 2.0 141 chr3L 8051297 3` UTR nmo + chr3L 8051368 3` UTR nmo + chr3L 8051438 3` UTR nmo + chr3L_6_8050001 chr3L_8050001 RAL-513 1307 chr3L 8149754 8149776 chr3L 8149866 8149901 6 122 1.5 3.5 2.5 1.7 147 chr3L 8149754 intron CG13676 - chr3L 8149828 intron CG13676 - chr3L 8149901 intron CG13676 - chr3L_6_8145001 chr3L_8145001 RAL-513 1308 chr3L 8178505 8178521 chr3L 8178602 8178618 6 96 2.0 0.0 1.0 3.0 113 chr3L 8178505 intergenic Nmt -,mthl7 - chr3L 8178562 intergenic mthl7 -,Nmt - chr3L 8178618 intergenic mthl7 -,Nmt - chr3L_6_8175001 chr3L_8175001 RAL-513 1309 chr3L 8211736 8211764 chr3L 8211829 8211865 7 97 4.5 5.5 5.0 1.2 129 chr3L 8211736 intergenic CG8006 + chr3L 8211800 intergenic CG8006 + chr3L 8211865 intergenic CG8006 + chr3L_7_8210001 chr3L_8210001 RAL-513 1310 chr3L 8226696 8226737 chr3L 8226815 8226841 4 114 1.0 0.0 0.5 2.7 145 chr3L 8226696 intergenic not near genes chr3L 8226768 intergenic not near genes chr3L 8226841 intergenic not near genes chr3L_4_8225001 chr3L_8225001 RAL-513 1311 chr3L 8243447 8243480 chr3L 8243554 8243560 5 99 4.0 7.0 5.5 0.8 113 chr3L 8243447 intron Dscam4 + chr3L 8243504 intron Dscam4 + chr3L 8243560 intron Dscam4 + chr3L_5_8240001 chr3L_8240001 RAL-513 1312 chr3L 8243795 8243844 chr3L 8243899 8243946 14 100 3.0 4.5 3.8 2.9 151 chr3L 8243795 intron Dscam4 + chr3L 8243870 intron Dscam4 + chr3L 8243946 intron Dscam4 + chr3L_14_8240001 chr3L_8240001 RAL-513 1313 chr3L 8364501 8364526 chr3L 8364612 8364637 9 109 4.5 0.5 2.5 2.6 136 chr3L 8364501 intergenic not near genes chr3L 8364569 intergenic not near genes chr3L 8364637 intergenic not near genes chr3L_9_8360001 chr3L_8360001 RAL-513 1314 chr3L 8451370 8451413 chr3L 8451468 8451485 8 94 0.5 3.5 2.0 2.7 115 chr3L 8451370 intron Gug + chr3L 8451428 intron Gug + chr3L 8451485 intron Gug + chr3L_8_8450001 chr3L_8450001 RAL-513 1315 chr3L 8481782 8481805 chr3L 8490935 8490969 roo 6 9155 2.0 5.0 3.5 1.3 9187 chr3L 8481782 intron CG43163 - chr3L 8486376 intron CG43163 - chr3L 8490969 intron CG43163 - chr3L_6_8485001 chr3L_8485001 RAL-513 1316 chr3L 8498283 8498307 chr3L 8505767 8505794 blood 4 7486 3.0 4.0 3.5 0.9 7511 chr3L 8498283 intron CG43163 - chr3L 8502038 intron CG43163 - chr3L 8505794 intron CG43163 - chr3L_4_8500001 chr3L_8500001 RAL-513 1317 chr3L 8498310 8498327 chr3L 8505766 8505779 blood 6 7466 2.0 4.0 3.0 1.5 7469 chr3L 8498310 intron CG43163 - chr3L 8502044 intron CG43163 - chr3L 8505779 intron CG43163 - chr3L_6_8500001 chr3L_8500001 RAL-513 1318 chr3L 8582932 8582959 chr3L 8583032 8583045 4 96 6.0 0.5 3.2 1.0 113 chr3L 8582932 intron CG43078 + chr3L 8582988 intron CG43078 + chr3L 8583045 intron CG43078 + chr3L_4_8580001 chr3L_8580001 RAL-513 1319 chr3L 8615024 8615056 chr3L 8615122 8615143 9 94 2.0 7.5 4.8 1.6 119 chr3L 8615024 exon CG6282 + chr3L 8615084 intron CG6282 + chr3L 8615143 intron CG6282 + chr3L_9_8615001 chr3L_8615001 RAL-513 1320 chr3L 8773635 8773642 chr3L 8773740 8773753 7 110 4.0 7.5 5.8 1.0 118 chr3L 8773635 intron Fhos + chr3L 8773694 intron Fhos + chr3L 8773753 intron Fhos + chr3L_7_8770001 chr3L_8770001 RAL-513 1321 chr3L 8774000 8774025 chr3L 8774152 8774178 12 150 4.5 7.0 5.8 1.8 178 chr3L 8774000 intron Fhos + chr3L 8774089 intron Fhos + chr3L 8774178 intron Fhos + chr3L_12_8770001 chr3L_8770001 RAL-513 1322 chr3L 8791263 8791279 chr3L 8796702 8796713 I-element 4 5438 6.0 8.0 7.0 0.5 5450 chr3L 8791263 exon Fhos + chr3L 8793988 intron Fhos + chr3L 8796713 intron Fhos + chr3L_4_8790001 chr3L_8790001 RAL-513 1323 chr3L 8791287 8791301 chr3L 8796690 8796741 I-element 8 5434 3.0 5.5 4.2 1.5 5454 chr3L 8791287 exon Fhos + chr3L 8794014 intron Fhos + chr3L 8796741 intron Fhos + chr3L_8_8790001 chr3L_8790001 RAL-513 1324 chr3L 8846184 8846206 chr3L 8846285 8846305 5 101 3.0 0.0 1.5 2.0 121 chr3L 8846184 intron dally + chr3L 8846244 intron dally + chr3L 8846305 intron dally + chr3L_5_8845001 chr3L_8845001 RAL-513 1325 chr3L 8887302 8887355 chr3L 8887405 8887452 16 100 0.0 5.0 2.5 4.6 150 chr3L 8887302 intron dally + chr3L 8887377 intron dally + chr3L 8887452 intron dally + chr3L_16_8885001 chr3L_8885001 RAL-513 1326 chr3L 8959339 8959382 chr3L 8959452 8959487 4 106 4.5 3.5 4.0 0.8 148 chr3L 8959339 intron CG13313 + chr3L 8959413 intron CG13313 + chr3L 8959487 intron CG13313 + chr3L_4_8955001 chr3L_8955001 RAL-513 1327 chr3L 9013690 9013692 chr3L 18417066 18417066 5 9403375 24.5 15.0 19.8 0.2 9403376 chr3L 9013690 intron Doc2 - chr3L 13715378 intron bru-3 - chr3L 18417066 intergenic not near genes chr3L_5_13715001 chr3L_13715001 RAL-513 1328 chr3L 9067298 9067341 chr3L 9067397 9067440 11 99 5.0 2.5 3.8 2.3 142 chr3L 9067298 3` UTR CG4911 - chr3L 9067369 3` UTR CG4911 - chr3L 9067440 3` UTR CG4911 - chr3L_11_9065001 chr3L_9065001 RAL-513 1329 chr3L 9076935 9076953 chr3L 9084491 9084507 412 9 7571 4.5 5.5 5.0 1.5 7572 chr3L 9076935 exon Tequila + chr3L 9080721 intron Tequila + chr3L 9084507 exon Tequila + chr3L_9_9080001 chr3L_9080001 RAL-513 1330 chr3L 9113520 9113565 chr3L 9113615 9113649 15 91 3.0 3.5 3.2 3.6 129 chr3L 9113520 intron bol - chr3L 9113584 intron bol - chr3L 9113649 intron bol - chr3L_15_9110001 chr3L_9110001 RAL-513 1331 chr3L 9130540 9130580 chr3L 9134318 9134361 412 8 3775 6.5 5.5 6.0 1.1 3821 chr3L 9130540 intergenic bol - chr3L 9132450 intergenic not near genes chr3L 9134361 intergenic Dhpr + chr3L_8_9130001 chr3L_9130001 RAL-513 1332 chr3L 9164688 9164706 chr3L 9166172 9166192 hobo 6 1486 8.5 1.5 5.0 1.0 1504 chr3L 9164688 intron Rdl - chr3L 9165440 intron Rdl - chr3L 9166192 intron Rdl - chr3L_6_9165001 chr3L_9165001 RAL-513 1333 chr3L 9191386 9191436 chr3L 9191585 9191635 19 192 2.0 3.5 2.8 5.0 249 chr3L 9191386 intergenic not near genes chr3L 9191510 intergenic not near genes chr3L 9191635 intergenic not near genes chr3L_19_9190001 chr3L_9190001 RAL-513 1334 chr3L 9219237 9219251 chr3L 9219915 9219942 jockey 5 684 8.0 2.5 5.2 0.8 705 chr3L 9219237 intergenic not near genes chr3L 9219590 intergenic not near genes chr3L 9219942 intergenic not near genes chr3L_5_9215001 chr3L_9215001 RAL-513 1335 chr3L 9219253 9219268 chr3L 9219909 9219959 jockey 6 679 5.5 2.0 3.8 1.2 706 chr3L 9219253 intergenic not near genes chr3L 9219606 intergenic not near genes chr3L 9219959 intergenic not near genes chr3L_6_9215001 chr3L_9215001 RAL-513 1336 chr3L 9220194 9220239 chr3L 9220295 9220340 12 98 3.5 2.5 3.0 3.0 146 chr3L 9220194 intergenic not near genes chr3L 9220267 intergenic not near genes chr3L 9220340 intergenic not near genes chr3L_12_9220001 chr3L_9220001 RAL-513 1337 chr3L 9270604 9270647 chr3L 9278378 9278395 roo 5 7768 1.0 2.5 1.8 1.8 7791 chr3L 9270604 intron GluRIB + chr3L 9274500 intron GluRIB + chr3L 9278395 exon GluRIB + chr3L_5_9270001 chr3L_9270001 RAL-513 1338 chr3L 9314046 9314058 chr3L 9314143 9314156 5 98 0.5 1.5 1.0 2.5 110 chr3L 9314046 intergenic not near genes chr3L 9314101 intergenic not near genes chr3L 9314156 intergenic not near genes chr3L_5_9310001 chr3L_9310001 RAL-513 1339 chr3L 9348449 9348488 chr3L 9348969 9348987 11 513 3.0 0.5 1.8 3.9 538 chr3L 9348449 intergenic PGRP-LC + chr3L 9348718 intergenic PGRP-LC + chr3L 9348987 intergenic not near genes chr3L_11_9345001 chr3L_9345001 RAL-513 1340 chr3L 9359572 9359612 chr3L 9359682 9359722 13 110 3.0 3.5 3.2 3.1 150 chr3L 9359572 3` UTR CG32039 + chr3L 9359647 3` UTR CG32039 + chr3L 9359722 3` UTR CG32039 + chr3L_13_9355001 chr3L_9355001 RAL-513 1341 chr3L 9443490 9443539 chr3L 9445301 9445335 S-element 11 1804 3.5 6.0 4.8 1.9 1845 chr3L 9443490 intron CG33926 + chr3L 9444412 intron CG33926 + chr3L 9445335 intron CG33926 + chr3L_11_9440001 chr3L_9440001 RAL-513 1342 chr3L 9498183 9498233 chr3L 9498279 9498330 13 93 3.5 2.0 2.8 3.4 147 chr3L 9498183 intron path - chr3L 9498256 intron path - chr3L 9498330 intron path - chr3L_13_9495001 chr3L_9495001 RAL-513 1343 chr3L 9503444 9503463 chr3L 9503552 9503571 5 109 5.0 5.5 5.2 0.8 127 chr3L 9503444 intron path - chr3L 9503508 intron path - chr3L 9503571 intron path - chr3L_5_9500001 chr3L_9500001 RAL-513 1344 chr3L 9526463 9526514 chr3L 9528163 9528213 Doc 9 1695 1.5 3.0 2.2 2.8 1750 chr3L 9526463 intergenic not near genes chr3L 9527338 intergenic not near genes chr3L 9528213 intergenic not near genes chr3L_9_9525001 chr3L_9525001 RAL-513 1345 chr3L 9533741 9533784 chr3L 9541321 9541363 412 5 7568 3.0 9.0 6.0 0.7 7622 chr3L 9533741 intergenic not near genes chr3L 9537552 intergenic not near genes chr3L 9541363 intergenic not near genes chr3L_5_9535001 chr3L_9535001 RAL-513 1346 chr3L 9548645 9548687 chr3L 9548825 9548865 7 179 3.0 1.5 2.2 2.2 220 chr3L 9548645 intron CG42673 + chr3L 9548755 intron CG42673 + chr3L 9548865 intron CG42673 + chr3L_7_9545001 chr3L_9545001 RAL-513 1347 chr3L 9571886 9571925 chr3L 9572254 9572261 jockey 10 362 1.5 0.5 1.0 5.0 375 chr3L 9571886 intron CG42673 + chr3L 9572074 intron CG42673 + chr3L 9572261 intron CG42673 + chr3L_10_9570001 chr3L_9570001 RAL-513 1348 chr3L 9575894 9575941 chr3L 9580991 9581001 jockey 10 5084 6.0 5.5 5.8 1.5 5107 chr3L 9575894 intron CG42673 + chr3L 9578448 intron CG42673 + chr3L 9581001 intron CG42673 + chr3L_10_9575001 chr3L_9575001 RAL-513 1349 chr3L 9589333 9589379 chr3L 9589507 9589552 10 171 4.0 4.0 4.0 2.0 219 chr3L 9589333 intron CG42673 + chr3L 9589442 intron CG42673 + chr3L 9589552 intron CG42673 + chr3L_10_9585001 chr3L_9585001 RAL-513 1350 chr3L 9637836 9637885 chr3L 9637937 9637950 20 96 3.0 0.0 1.5 8.0 114 chr3L 9637836 intron fry - chr3L 9637893 intron fry - chr3L 9637950 intron fry - chr3L_20_9635001 chr3L_9635001 RAL-513 1351 chr3L 9639041 9639060 chr3L 9639126 9639133 5 90 0.0 7.0 3.5 1.1 92 chr3L 9639041 intron fry - chr3L 9639087 intron fry - chr3L 9639133 intron fry - chr3L_5_9635001 chr3L_9635001 RAL-513 1352 chr3L 9646484 9646502 chr3L 9646591 9646605 6 124 4.5 0.0 2.2 1.9 121 chr3L 9646484 intron,intron fry -,CG33696 + chr3L 9646544 intron,intron fry -,CG33696 + chr3L 9646605 intron,intron fry -,CG33696 + chr3L_6_9645001 chr3L_9645001 RAL-513 1353 chr3L 9834576 9834617 chr3L 9834792 9834835 13 219 5.0 4.5 4.8 2.2 259 chr3L 9834576 3` UTR I-2 - chr3L 9834706 3` UTR I-2 - chr3L 9834835 3` UTR I-2 - chr3L_13_9830001 chr3L_9830001 RAL-513 1354 chr3L 9907866 9907894 chr3L 9907962 9907987 5 91 2.0 2.5 2.2 1.6 121 chr3L 9907866 intergenic CG34356 + chr3L 9907926 intergenic CG34356 + chr3L 9907987 intergenic CG34356 + chr3L_5_9905001 chr3L_9905001 RAL-513 1355 chr3L 9913880 9913932 chr3L 9913979 9913983 16 93 3.5 5.0 4.2 3.1 103 chr3L 9913880 intron CG34356 + chr3L 9913932 intron CG34356 + chr3L 9913983 intron CG34356 + chr3L_16_9910001 chr3L_9910001 RAL-513 1356 chr3L 9929662 9929701 chr3L 9938447 9938485 roo 11 8787 3.0 5.0 4.0 2.2 8823 chr3L 9929662 intron CG34356 + chr3L 9934074 intron CG34356 + chr3L 9938485 intron CG34356 + chr3L_11_9930001 chr3L_9930001 RAL-513 1357 chr3L 9987116 9987122 chr3L 9987192 9987193 4 74 8.0 5.0 6.5 0.5 77 chr3L 9987116 intron dpr6 + chr3L 9987154 intron dpr6 + chr3L 9987193 intron dpr6 + chr3L_4_9985001 chr3L_9985001 RAL-513 1358 chr3L 10003130 10003175 chr3L 10003247 10003288 11 115 3.5 2.5 3.0 2.8 158 chr3L 10003130 intron dpr6 + chr3L 10003209 intron dpr6 + chr3L 10003288 intron dpr6 + chr3L_11_10000001 chr3L_10000001 RAL-513 1359 chr3L 10007178 10007206 chr3L 10007300 10007325 10 122 2.5 4.5 3.5 2.2 147 chr3L 10007178 intron dpr6 + chr3L 10007252 intron dpr6 + chr3L 10007325 intron dpr6 + chr3L_10_10005001 chr3L_10005001 RAL-513 1360 chr3L 10049530 10049571 chr3L 10049623 10049624 5 86 4.5 3.0 3.8 1.0 94 chr3L 10049530 intron dpr6 + chr3L 10049577 intron dpr6 + chr3L 10049624 intron dpr6 + chr3L_5_10045001 chr3L_10045001 RAL-513 1361 chr3L 10182243 10182252 chr3L 10182342 10182349 5 101 8.0 4.5 6.2 0.7 106 chr3L 10182243 exon dpr10 - chr3L 10182296 5` UTR dpr10 - chr3L 10182349 5` UTR dpr10 - chr3L_5_10180001 chr3L_10180001 RAL-513 1362 chr3L 10182253 10182283 chr3L 10182341 10182382 17 94 3.0 4.0 3.5 3.8 129 chr3L 10182253 exon dpr10 - chr3L 10182318 5` UTR dpr10 - chr3L 10182382 5` UTR dpr10 - chr3L_17_10180001 chr3L_10180001 RAL-513 1363 chr3L 10222754 10222775 chr3L 10222823 10222873 10 95 1.5 5.5 3.5 2.2 119 chr3L 10222754 intron scramb1 - chr3L 10222814 intron scramb1 - chr3L 10222873 intron scramb1 - chr3L_10_10220001 chr3L_10220001 RAL-513 1364 chr3L 10269758 10269768 chr3L 10269862 10269872 5 101 6.0 7.5 6.8 0.6 114 chr3L 10269758 5` UTR CR45242 + chr3L 10269815 5` UTR CR45242 + chr3L 10269872 5` UTR CR45242 + chr3L_5_10265001 chr3L_10265001 RAL-513 1365 chr3L 10269772 10269786 chr3L 10269861 10269889 7 99 2.5 7.0 4.8 1.2 117 chr3L 10269772 5` UTR CR45242 + chr3L 10269830 5` UTR CR45242 + chr3L 10269889 5` UTR CR45242 + chr3L_7_10265001 chr3L_10265001 RAL-513 1366 chr3L 10298649 10298692 chr3L 10298754 10298798 7 106 0.5 1.0 0.8 3.9 149 chr3L 10298649 intergenic not near genes chr3L 10298724 intergenic not near genes chr3L 10298798 intergenic not near genes chr3L_7_10295001 chr3L_10295001 RAL-513 1367 chr3L 10300035 10300073 chr3L 10300147 10300184 8 111 3.5 4.5 4.0 1.6 149 chr3L 10300035 intergenic not near genes chr3L 10300110 intergenic not near genes chr3L 10300184 intergenic not near genes chr3L_8_10300001 chr3L_10300001 RAL-513 1368 chr3L 10308733 10308771 chr3L 10308830 10308864 8 93 2.0 4.5 3.2 1.9 131 chr3L 10308733 intergenic not near genes chr3L 10308798 intergenic not near genes chr3L 10308864 intergenic not near genes chr3L_8_10305001 chr3L_10305001 RAL-513 1369 chr3L 10348638 10348674 chr3L 10348769 10348811 10 136 3.0 0.0 1.5 4.0 173 chr3L 10348638 intron CR44327 + chr3L 10348724 intron CR44327 + chr3L 10348811 intron CR44327 + chr3L_10_10345001 chr3L_10345001 RAL-513 1370 chr3L 10414939 10414964 chr3L 10417313 10417356 Doc 5 2386 0.5 2.5 1.5 2.0 2417 chr3L 10414939 intergenic CG12362 + chr3L 10416148 intergenic not near genes chr3L 10417356 intergenic not near genes chr3L_5_10415001 chr3L_10415001 RAL-513 1371 chr3L 10414967 10414978 chr3L 10417311 10417345 Doc 4 2364 0.0 2.5 1.2 1.8 2378 chr3L 10414967 intergenic CG12362 + chr3L 10416156 intergenic not near genes chr3L 10417345 intergenic not near genes chr3L_4_10415001 chr3L_10415001 RAL-513 1372 chr3L 10417555 10417601 chr3L 10417652 10417671 7 82 4.5 5.5 5.0 1.2 116 chr3L 10417555 intergenic not near genes chr3L 10417613 intergenic not near genes chr3L 10417671 intergenic not near genes chr3L_7_10415001 chr3L_10415001 RAL-513 1373 chr3L 10455990 10456023 chr3L 10456201 10456236 8 198 5.5 2.0 3.8 1.7 246 chr3L 10455990 intergenic not near genes chr3L 10456113 intergenic not near genes chr3L 10456236 intergenic not near genes chr3L_8_10455001 chr3L_10455001 RAL-513 1374 chr3L 10456729 10456766 chr3L 10456837 10456877 11 109 0.5 1.5 1.0 5.5 148 chr3L 10456729 intergenic not near genes chr3L 10456803 intergenic not near genes chr3L 10456877 intergenic not near genes chr3L_11_10455001 chr3L_10455001 RAL-513 1375 chr3L 10466051 10466056 chr3L 10466152 10466157 4 101 4.5 6.0 5.2 0.6 106 chr3L 10466051 intron S-Lap3 + chr3L 10466104 intron S-Lap3 + chr3L 10466157 intron S-Lap3 + chr3L_4_10465001 chr3L_10465001 RAL-513 1376 chr3L 10553079 10553125 chr3L 10553181 10553226 12 92 2.0 3.5 2.8 3.2 147 chr3L 10553079 intron A2bp1 + chr3L 10553152 intron A2bp1 + chr3L 10553226 intron A2bp1 + chr3L_12_10550001 chr3L_10550001 RAL-513 1377 chr3L 10584258 10584301 chr3L 10584365 10584408 8 105 1.5 0.0 0.8 4.4 150 chr3L 10584258 intron A2bp1 + chr3L 10584333 intron A2bp1 + chr3L 10584408 intron A2bp1 + chr3L_8_10580001 chr3L_10580001 RAL-513 1378 chr3L 10600437 10600476 chr3L 10600539 10600577 7 101 2.0 3.0 2.5 2.0 140 chr3L 10600437 intergenic not near genes chr3L 10600507 intergenic not near genes chr3L 10600577 intergenic not near genes chr3L_7_10600001 chr3L_10600001 RAL-513 1379 chr3L 10617271 10617314 chr3L 10617716 10617758 9 445 2.0 3.0 2.5 2.6 487 chr3L 10617271 intergenic not near genes chr3L 10617514 intergenic not near genes chr3L 10617758 intergenic not near genes chr3L_9_10615001 chr3L_10615001 RAL-513 1380 chr3L 10621840 10621871 chr3L 10621947 10621969 7 103 3.5 4.5 4.0 1.4 129 chr3L 10621840 intergenic not near genes chr3L 10621904 intergenic not near genes chr3L 10621969 intergenic not near genes chr3L_7_10620001 chr3L_10620001 RAL-513 1381 chr3L 10694901 10694925 chr3L 10695011 10695035 11 110 0.5 1.0 0.8 6.1 134 chr3L 10694901 intron NijA - chr3L 10694968 intron NijA - chr3L 10695035 exon NijA - chr3L_11_10690001 chr3L_10690001 RAL-513 1382 chr3L 10727915 10727959 chr3L 10728026 10728039 10 106 2.5 2.0 2.2 3.1 124 chr3L 10727915 intergenic not near genes chr3L 10727977 intergenic not near genes chr3L 10728039 intergenic not near genes chr3L_10_10725001 chr3L_10725001 RAL-513 1383 chr3L 10729785 10729824 chr3L 10729883 10729920 10 93 4.5 0.0 2.2 3.1 135 chr3L 10729785 intergenic not near genes chr3L 10729852 intergenic not near genes chr3L 10729920 intergenic not near genes chr3L_10_10725001 chr3L_10725001 RAL-513 1384 chr3L 10745534 10745567 chr3L 10745634 10745667 6 100 4.0 4.5 4.2 1.2 133 chr3L 10745534 intergenic not near genes chr3L 10745600 intergenic not near genes chr3L 10745667 intergenic not near genes chr3L_6_10745001 chr3L_10745001 RAL-513 1385 chr3L 10818494 10818526 chr3L 10818585 10818626 5 98 4.0 5.0 4.5 0.9 132 chr3L 10818494 intergenic not near genes chr3L 10818560 intergenic not near genes chr3L 10818626 intergenic not near genes chr3L_5_10815001 chr3L_10815001 RAL-513 1386 chr3L 10820482 10820517 chr3L 10820651 10820664 4 158 2.5 0.0 1.2 1.8 182 chr3L 10820482 intergenic not near genes chr3L 10820573 intergenic not near genes chr3L 10820664 intergenic not near genes chr3L_4_10820001 chr3L_10820001 RAL-513 1387 chr3L 10937257 10937263 chr3L 10937359 10937365 5 102 2.0 0.0 1.0 2.5 108 chr3L 10937257 intergenic not near genes chr3L 10937311 intergenic not near genes chr3L 10937365 intergenic not near genes chr3L_5_10935001 chr3L_10935001 RAL-513 1388 chr3L 11105283 11105328 chr3L 11107014 11107044 X-element 12 1726 1.5 4.5 3.0 3.0 1761 chr3L 11105283 intergenic not near genes chr3L 11106164 intergenic not near genes chr3L 11107044 exon CG32073 - chr3L_12_11105001 chr3L_11105001 RAL-513 1389 chr3L 11135513 11135801 chr3L 11135759 11135906 13 159 1.0 2.0 1.5 5.2 393 chr3L 11135513 intergenic CG14143 + chr3L 11135710 intergenic CG14143 +,CG32082 + chr3L 11135906 intergenic CG32082 +,CG14143 + chr3L_13_11135001 chr3L_11135001 RAL-513 1390 chr3L 11145536 11145557 chr3L 11145636 11145666 6 108 0.0 4.5 2.2 1.9 130 chr3L 11145536 intron CG32082 + chr3L 11145601 intron CG32082 + chr3L 11145666 intron CG32082 + chr3L_6_11145001 chr3L_11145001 RAL-513 1391 chr3L 11154841 11154872 chr3L 11155144 11155165 9 297 1.0 3.5 2.2 2.8 324 chr3L 11154841 intron CG32082 + chr3L 11155003 intron CG32082 + chr3L 11155165 intron CG32082 + chr3L_9_11155001 chr3L_11155001 RAL-513 1392 chr3L 11245069 11245120 chr3L 11245179 11245218 13 102 5.0 7.0 6.0 1.9 149 chr3L 11245069 intergenic not near genes chr3L 11245144 intergenic not near genes chr3L 11245218 intergenic not near genes chr3L_13_11245001 chr3L_11245001 RAL-513 1393 chr3L 11264459 11264497 chr3L 11271417 11271447 17.6 14 6959 3.0 2.0 2.5 4.0 6988 chr3L 11264459 intergenic not near genes chr3L 11267953 intergenic not near genes chr3L 11271447 intergenic not near genes chr3L_14_11265001 chr3L_11265001 RAL-513 1394 chr3L 11290616 11290653 chr3L 11290958 11290996 9 338 4.0 6.5 5.2 1.5 380 chr3L 11290616 intron CG6175 - chr3L 11290806 intron CG6175 - chr3L 11290996 intron CG6175 - chr3L_9_11290001 chr3L_11290001 RAL-513 1395 chr3L 11304820 11304835 chr3L 11304936 11304952 5 116 3.0 0.5 1.8 1.8 132 chr3L 11304820 intergenic not near genes chr3L 11304886 intergenic not near genes chr3L 11304952 intergenic not near genes chr3L_5_11300001 chr3L_11300001 RAL-513 1396 chr3L 11329681 11329698 chr3L 11332905 11332922 jockey 4 3224 11.5 5.5 8.5 0.4 3241 chr3L 11329681 intergenic not near genes chr3L 11331302 intergenic not near genes chr3L 11332922 intergenic not near genes chr3L_4_11330001 chr3L_11330001 RAL-513 1397 chr3L 11329703 11329723 chr3L 11332899 11332943 jockey 8 3209 7.5 3.5 5.5 1.2 3240 chr3L 11329703 intergenic not near genes chr3L 11331323 intergenic not near genes chr3L 11332943 intergenic not near genes chr3L_8_11330001 chr3L_11330001 RAL-513 1398 chr3L 11335822 11335848 chr3L 11336002 11336018 4 172 4.0 0.0 2.0 1.3 196 chr3L 11335822 intergenic not near genes chr3L 11335920 intergenic not near genes chr3L 11336018 intergenic not near genes chr3L_4_11335001 chr3L_11335001 RAL-513 1399 chr3L 11379317 11379340 chr3L 11379415 11379438 4 98 4.5 3.5 4.0 0.8 121 chr3L 11379317 intergenic not near genes chr3L 11379378 intergenic not near genes chr3L 11379438 intergenic not near genes chr3L_4_11375001 chr3L_11375001 RAL-513 1400 chr3L 11379347 11379358 chr3L 11379408 11379417 5 74 2.0 2.0 2.0 1.7 70 chr3L 11379347 intergenic not near genes chr3L 11379382 intergenic not near genes chr3L 11379417 intergenic not near genes chr3L_5_11375001 chr3L_11375001 RAL-513 1401 chr3L 11445032 11445061 chr3L 11445129 11445158 6 97 0.0 3.5 1.8 2.1 126 chr3L 11445032 3` UTR CR44549 - chr3L 11445095 3` UTR CR44549 - chr3L 11445158 intergenic CG7557 +,CR44549 - chr3L_6_11445001 chr3L_11445001 RAL-513 1402 chr3L 11579538 11579584 chr3L 11579662 11579710 11 121 2.0 2.0 2.0 3.7 172 chr3L 11579538 intergenic CG43390 - chr3L 11579624 intergenic CG43390 - chr3L 11579710 intergenic CG43390 - chr3L_11_11575001 chr3L_11575001 RAL-513 1403 chr3L 11723065 11723115 chr3L 11727880 11727930 Doc 17 4810 3.5 4.0 3.8 3.5 4865 chr3L 11723065 3` UTR Bmcp + chr3L 11725498 intron Bmcp + chr3L 11727930 3` UTR Bmcp + chr3L_17_11725001 chr3L_11725001 RAL-513 1404 chr3L 11739844 11739878 chr3L 11739966 11740001 8 126 22.0 23.5 22.8 0.3 157 chr3L 11739844 intron CG6024 - chr3L 11739922 intron CG6024 - chr3L 11740001 intron CG6024 - chr3L_8_11735001 chr3L_11735001 RAL-513 1405 chr3L 11740137 11740153 chr3L 11740241 11740262 4 106 7.0 6.5 6.8 0.5 125 chr3L 11740137 intron CG6024 - chr3L 11740200 intron CG6024 - chr3L 11740262 intron CG6024 - chr3L_4_11740001 chr3L_11740001 RAL-513 1406 chr3L 7749470 7749471 chr3L 11777678 11777678 8 4028207 16.5 8.0 12.2 0.6 4028208 chr3L 7749470 intron,3` UTR CG32373 +,CG13685 + chr3L 9763574 5` UTR CG8177 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_8_9760001 chr3L_9760001 RAL-513 1407 chr3L 11777678 11777678 chr3L 12163305 12163305 5 385627 9.5 18.0 13.8 0.3 385627 chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L 11970492 exon Muc68E - chr3L 12163305 intron CG9760 - chr3L_5_11970001 chr3L_11970001 RAL-513 1408 chr3L 11843358 11843376 chr3L 11843457 11843462 4 96 3.0 5.0 4.0 0.8 104 chr3L 11843358 intergenic not near genes chr3L 11843410 intergenic not near genes chr3L 11843462 intergenic not near genes chr3L_4_11840001 chr3L_11840001 RAL-513 1409 chr3L 11846409 11846420 chr3L 11846520 11846548 5 121 0.0 3.0 1.5 2.0 139 chr3L 11846409 intergenic not near genes chr3L 11846478 intergenic not near genes chr3L 11846548 intergenic not near genes chr3L_5_11845001 chr3L_11845001 RAL-513 1410 chr3L 11849316 11849356 chr3L 11849435 11849461 7 118 3.5 5.5 4.5 1.3 145 chr3L 11849316 intergenic not near genes chr3L 11849388 intergenic not near genes chr3L 11849461 intergenic not near genes chr3L_7_11845001 chr3L_11845001 RAL-513 1411 chr3L 11864547 11864584 chr3L 11865861 11865883 pogo 10 1309 4.0 3.5 3.8 2.1 1336 chr3L 11864547 intron CG44837 - chr3L 11865215 intron CG44837 - chr3L 11865883 intron CG44837 - chr3L_10_11865001 chr3L_11865001 RAL-513 1412 chr3L 11872262 11872273 chr3L 11872348 11872390 6 102 3.0 8.0 5.5 0.9 128 chr3L 11872262 intron CG44837 - chr3L 11872326 intron CG44837 - chr3L 11872390 intron CG44837 - chr3L_6_11870001 chr3L_11870001 RAL-513 1413 chr3L 11887260 11887286 chr3L 11887365 11887376 9 108 3.0 0.0 1.5 3.6 116 chr3L 11887260 intron,3` UTR CG44837 -,CG5897 - chr3L 11887318 intron,3` UTR CG44837 -,CG5897 - chr3L 11887376 intron,3` UTR CG44837 -,CG5897 - chr3L_9_11885001 chr3L_11885001 RAL-513 1414 chr3L 11984546 11984595 chr3L 11984657 11984670 11 94 4.5 1.0 2.8 2.9 124 chr3L 11984546 intergenic CG6938 + chr3L 11984608 intergenic CG6938 + chr3L 11984670 intergenic CG6938 + chr3L_11_11980001 chr3L_11980001 RAL-513 1415 chr3L 12013897 12013931 chr3L 12014005 12014023 9 106 5.5 1.0 3.2 2.1 126 chr3L 12013897 intron rols - chr3L 12013960 intron rols - chr3L 12014023 intron rols - chr3L_9_12010001 chr3L_12010001 RAL-513 1416 chr3L 12037498 12037550 chr3L 12037905 12037938 5 391 2.0 0.0 1.0 2.5 440 chr3L 12037498 intron rols - chr3L 12037718 intron rols - chr3L 12037938 intron rols - chr3L_5_12035001 chr3L_12035001 RAL-513 1417 chr3L 12091783 12091807 chr3L 12091914 12091963 9 136 4.5 2.5 3.5 2.0 180 chr3L 12091783 intergenic not near genes chr3L 12091873 intergenic not near genes chr3L 12091963 intergenic not near genes chr3L_9_12090001 chr3L_12090001 RAL-513 1418 chr3L 12304075 12304117 chr3L 12304170 12304210 6 92 7.5 6.5 7.0 0.8 135 chr3L 12304075 intergenic not near genes chr3L 12304142 intergenic not near genes chr3L 12304210 intergenic not near genes chr3L_6_12300001 chr3L_12300001 RAL-513 1419 chr3L 12353932 12353948 chr3L 12354028 12354057 6 101 2.5 5.0 3.8 1.2 125 chr3L 12353932 intergenic not near genes chr3L 12353994 intergenic not near genes chr3L 12354057 intergenic not near genes chr3L_6_12350001 chr3L_12350001 RAL-513 1420 chr3L 12388008 12388011 chr3L 12388103 12388108 4 96 1.0 5.0 3.0 1.0 100 chr3L 12388008 intron Ncc69 - chr3L 12388058 intron Ncc69 - chr3L 12388108 intron Ncc69 - chr3L_4_12385001 chr3L_12385001 RAL-513 1421 chr3L 12460308 12460325 chr3L 12460405 12460412 6 94 0.5 5.0 2.8 1.6 104 chr3L 12460308 intergenic not near genes chr3L 12460360 intergenic not near genes chr3L 12460412 intergenic not near genes chr3L_6_12460001 chr3L_12460001 RAL-513 1422 chr3L 12476282 12476318 chr3L 12476379 12476414 5 96 2.0 4.5 3.2 1.2 132 chr3L 12476282 intron CG10663 - chr3L 12476348 intron CG10663 - chr3L 12476414 intron CG10663 - chr3L_5_12475001 chr3L_12475001 RAL-513 1423 chr3L 12596731 12596778 chr3L 12596905 12596951 21 168 3.5 3.0 3.2 5.0 220 chr3L 12596731 intergenic not near genes chr3L 12596841 intergenic not near genes chr3L 12596951 intergenic not near genes chr3L_21_12595001 chr3L_12595001 RAL-513 1424 chr3L 12610989 12611027 chr3L 12611255 12611266 5 259 0.0 1.5 0.8 2.8 277 chr3L 12610989 intron caup + chr3L 12611128 intron caup + chr3L 12611266 intron caup + chr3L_5_12610001 chr3L_12610001 RAL-513 1425 chr3L 12615723 12615749 chr3L 12615817 12615817 4 81 6.0 4.5 5.2 0.6 94 chr3L 12615723 intron caup + chr3L 12615770 intron caup + chr3L 12615817 intron caup + chr3L_4_12615001 chr3L_12615001 RAL-513 1426 chr3L 12615750 12615768 chr3L 12615815 12615834 6 72 3.0 4.0 3.5 1.3 84 chr3L 12615750 intron caup + chr3L 12615792 intron caup + chr3L 12615834 intron caup + chr3L_6_12615001 chr3L_12615001 RAL-513 1427 chr3L 12626136 12626156 chr3L 12626265 12626283 9 128 2.0 2.0 2.0 3.0 147 chr3L 12626136 intergenic not near genes chr3L 12626210 intergenic not near genes chr3L 12626283 intergenic not near genes chr3L_9_12625001 chr3L_12625001 RAL-513 1428 chr3L 12720306 12720360 chr3L 12720410 12720465 10 101 3.0 1.5 2.2 3.1 159 chr3L 12720306 intergenic not near genes chr3L 12720386 intergenic not near genes chr3L 12720465 intergenic not near genes chr3L_10_12720001 chr3L_12720001 RAL-513 1429 chr3L 12801959 12802013 chr3L 12802055 12802083 13 91 3.0 4.0 3.5 2.9 124 chr3L 12801959 intron Atg1 - chr3L 12802021 intron Atg1 - chr3L 12802083 intron Atg1 - chr3L_13_12800001 chr3L_12800001 RAL-513 1430 chr3L 12874903 12874956 chr3L 12877215 12877268 jockey 10 2312 1.5 1.5 1.5 4.0 2365 chr3L 12874903 intergenic not near genes chr3L 12876086 intergenic not near genes chr3L 12877268 intergenic not near genes chr3L_10_12875001 chr3L_12875001 RAL-513 1431 chr3L 12894793 12894817 chr3L 12894891 12894892 4 92 6.5 7.5 7.0 0.5 99 chr3L 12894793 intergenic CG14118 + chr3L 12894842 intergenic CG14118 + chr3L 12894892 intergenic CG14118 + chr3L_4_12890001 chr3L_12890001 RAL-513 1432 chr3L 12919262 12919306 chr3L 12924766 12924775 Rt1c 7 5495 6.0 2.5 4.2 1.3 5513 chr3L 12919262 intergenic not near genes chr3L 12922018 intergenic not near genes chr3L 12924775 intergenic not near genes chr3L_7_12920001 chr3L_12920001 RAL-513 1433 chr3L 12941956 12941988 chr3L 12942083 12942114 4 120 2.0 3.5 2.8 1.1 158 chr3L 12941956 intergenic not near genes chr3L 12942035 intergenic not near genes chr3L 12942114 intergenic not near genes chr3L_4_12940001 chr3L_12940001 RAL-513 1434 chr3L 12955109 12955163 chr3L 12955205 12955259 13 95 5.5 8.5 7.0 1.6 150 chr3L 12955109 intergenic CG10752 - chr3L 12955184 intergenic not near genes chr3L 12955259 intergenic not near genes chr3L_13_12955001 chr3L_12955001 RAL-513 1435 chr3L 12957777 12957818 chr3L 12962267 12962305 copia 9 4495 6.0 4.5 5.2 1.5 4528 chr3L 12957777 intergenic not near genes chr3L 12960041 intergenic not near genes chr3L 12962305 intergenic not near genes chr3L_9_12960001 chr3L_12960001 RAL-513 1436 chr3L 12978298 12978349 chr3L 12978414 12978455 11 109 2.0 3.0 2.5 3.1 157 chr3L 12978298 intergenic not near genes chr3L 12978376 intergenic not near genes chr3L 12978455 intergenic not near genes chr3L_11_12975001 chr3L_12975001 RAL-513 1437 chr3L 13007680 13007704 chr3L 13007775 13007797 9 97 6.0 1.0 3.5 2.0 117 chr3L 13007680 exon CG11263 + chr3L 13007738 3` UTR CG11263 + chr3L 13007797 3` UTR CG11263 + chr3L_9_13005001 chr3L_13005001 RAL-513 1438 chr3L 13069539 13069588 chr3L 13069638 13069687 16 98 0.5 3.0 1.8 5.7 148 chr3L 13069539 intergenic not near genes chr3L 13069613 intergenic not near genes chr3L 13069687 intergenic not near genes chr3L_16_13065001 chr3L_13065001 RAL-513 1439 chr3L 13161779 13161796 chr3L 13161866 13161891 7 94 3.0 4.5 3.8 1.5 112 chr3L 13161779 intergenic not near genes chr3L 13161835 intergenic not near genes chr3L 13161891 intergenic not near genes chr3L_7_13160001 chr3L_13160001 RAL-513 1440 chr3L 13174246 13174273 chr3L 13174356 13174385 9 111 4.5 2.0 3.2 2.1 139 chr3L 13174246 intergenic snky + chr3L 13174316 intergenic snky + chr3L 13174385 intergenic snky + chr3L_9_13170001 chr3L_13170001 RAL-513 1441 chr3L 13182428 13182468 chr3L 13182526 13182566 5 98 6.0 0.0 3.0 1.2 138 chr3L 13182428 intergenic not near genes chr3L 13182497 intergenic not near genes chr3L 13182566 intergenic not near genes chr3L_5_13180001 chr3L_13180001 RAL-513 1442 chr3L 13197083 13197116 chr3L 13197227 13197253 4 138 0.0 7.0 3.5 0.9 170 chr3L 13197083 intergenic not near genes chr3L 13197168 intergenic not near genes chr3L 13197253 intergenic not near genes chr3L_4_13195001 chr3L_13195001 RAL-513 1443 chr3L 13205252 13205270 chr3L 13205321 13205361 8 86 4.0 3.0 3.5 1.8 109 chr3L 13205252 intergenic not near genes chr3L 13205306 intergenic not near genes chr3L 13205361 intergenic not near genes chr3L_8_13205001 chr3L_13205001 RAL-513 1444 chr3L 13241604 13241622 chr3L 13241700 13241701 4 88 7.5 11.5 9.5 0.4 97 chr3L 13241604 intron caps + chr3L 13241652 intron caps + chr3L 13241701 intron caps + chr3L_4_13240001 chr3L_13240001 RAL-513 1445 chr3L 13314592 13314607 chr3L 13314695 13314710 5 103 7.5 2.5 5.0 0.8 118 chr3L 13314592 intergenic not near genes chr3L 13314651 intergenic not near genes chr3L 13314710 intergenic not near genes chr3L_5_13310001 chr3L_13310001 RAL-513 1446 chr3L 13320595 13320637 chr3L 13320699 13320724 9 102 5.0 5.5 5.2 1.5 129 chr3L 13320595 intergenic not near genes chr3L 13320660 intergenic not near genes chr3L 13320724 intergenic not near genes chr3L_9_13320001 chr3L_13320001 RAL-513 1447 chr3L 13324635 13324688 chr3L 13324748 13324781 10 108 3.0 1.0 2.0 3.3 146 chr3L 13324635 3` UTR CR44558 - chr3L 13324708 3` UTR CR44558 - chr3L 13324781 3` UTR CR44558 - chr3L_10_13320001 chr3L_13320001 RAL-513 1448 chr3L 13337149 13337154 chr3L 13337260 13337265 4 110 0.0 3.0 1.5 1.6 116 chr3L 13337149 intergenic not near genes chr3L 13337207 intergenic not near genes chr3L 13337265 intergenic not near genes chr3L_4_13335001 chr3L_13335001 RAL-513 1449 chr3L 13386274 13386317 chr3L 13386610 13386654 8 332 2.0 6.0 4.0 1.6 380 chr3L 13386274 3` UTR CG10171 - chr3L 13386464 3` UTR CG10171 - chr3L 13386654 3` UTR CG10171 - chr3L_8_13385001 chr3L_13385001 RAL-513 1450 chr3L 13400529 13400543 chr3L 13400605 13400639 4 86 1.0 2.5 1.8 1.4 110 chr3L 13400529 intron sens - chr3L 13400584 intron sens - chr3L 13400639 intron sens - chr3L_4_13400001 chr3L_13400001 RAL-513 1451 chr3L 13422883 13422900 chr3L 13422989 13423022 5 124 1.5 6.0 3.8 1.0 139 chr3L 13422883 intergenic CG33263 - chr3L 13422952 intergenic CG33263 - chr3L 13423022 intergenic CG33263 - chr3L_5_13420001 chr3L_13420001 RAL-513 1452 chr3L 13477001 13477037 chr3L 13477096 13477127 11 95 0.0 3.5 1.8 3.9 126 chr3L 13477001 intergenic not near genes chr3L 13477064 intergenic stv + chr3L 13477127 intergenic stv + chr3L_11_13475001 chr3L_13475001 RAL-513 1453 chr3L 13525154 13525185 chr3L 13532956 13533001 roo 8 7809 5.5 9.0 7.2 1.0 7847 chr3L 13525154 intergenic not near genes chr3L 13529078 intergenic not near genes chr3L 13533001 intergenic not near genes chr3L_8_13525001 chr3L_13525001 RAL-513 1454 chr3L 13574606 13574619 chr3L 13580136 13580149 Rt1c 4 5530 4.0 5.0 4.5 0.7 5543 chr3L 13574606 intron bru-3 - chr3L 13577378 intron bru-3 - chr3L 13580149 intron bru-3 - chr3L_4_13575001 chr3L_13575001 RAL-513 1455 chr3L 13629507 13629543 chr3L 13629638 13629672 9 129 3.0 4.0 3.5 2.0 165 chr3L 13629507 intron bru-3 - chr3L 13629590 intron bru-3 - chr3L 13629672 intron bru-3 - chr3L_9_13625001 chr3L_13625001 RAL-513 1456 chr3L 13648895 13648919 chr3L 13648975 13649029 8 96 5.0 3.0 4.0 1.6 134 chr3L 13648895 intron bru-3 - chr3L 13648962 intron bru-3 - chr3L 13649029 intron bru-3 - chr3L_8_13645001 chr3L_13645001 RAL-513 1457 chr3L 13677515 13677560 chr3L 13677609 13677657 4 96 2.0 4.0 3.0 1.0 142 chr3L 13677515 intron bru-3 - chr3L 13677586 intron bru-3 - chr3L 13677657 intron bru-3 - chr3L_4_13675001 chr3L_13675001 RAL-513 1458 chr3L 13726207 13726250 chr3L 13726318 13726346 4 103 1.5 4.0 2.8 1.1 139 chr3L 13726207 intron bru-3 - chr3L 13726276 intron bru-3 - chr3L 13726346 intron bru-3 - chr3L_4_13725001 chr3L_13725001 RAL-513 1459 chr3L 13745281 13745305 chr3L 13745390 13745414 8 109 3.0 7.0 5.0 1.3 133 chr3L 13745281 intron bru-3 - chr3L 13745348 intron bru-3 - chr3L 13745414 intron bru-3 - chr3L_8_13745001 chr3L_13745001 RAL-513 1460 chr3L 13804529 13804575 chr3L 13822835 13822861 roo 9 18300 3.5 5.0 4.2 1.7 18332 chr3L 13804529 intergenic not near genes chr3L 13813695 intergenic not near genes chr3L 13822861 intergenic not near genes chr3L_9_13810001 chr3L_13810001 RAL-513 1461 chr3L 13884366 13884380 chr3L 13884479 13884493 4 114 7.0 0.0 3.5 0.9 127 chr3L 13884366 intron dysc - chr3L 13884430 intron dysc - chr3L 13884493 intron dysc - chr3L_4_13880001 chr3L_13880001 RAL-513 1462 chr3L 13941606 13941647 chr3L 13941720 13941742 7 107 2.5 2.0 2.2 2.2 136 chr3L 13941606 intron CG32137 + chr3L 13941674 intron CG32137 + chr3L 13941742 intron CG32137 + chr3L_7_13940001 chr3L_13940001 RAL-513 1463 chr3L 13964941 13964984 chr3L 13965123 13965142 7 179 0.0 5.5 2.8 1.8 201 chr3L 13964941 intergenic Meics -,Nxf3 +,ssp2 + chr3L 13965042 intergenic Nxf3 +,ssp2 +,Meics - chr3L 13965142 intergenic Nxf3 +,ssp2 +,Meics - chr3L_7_13965001 chr3L_13965001 RAL-513 1464 chr3L 14061647 14061690 chr3L 14061754 14061796 4 108 4.5 1.5 3.0 1.0 149 chr3L 14061647 intron CG32138 + chr3L 14061722 intron CG32138 + chr3L 14061796 intron CG32138 + chr3L_4_14060001 chr3L_14060001 RAL-513 1465 chr3L 14211424 14211449 chr3L 14211522 14211547 5 98 3.0 3.0 3.0 1.2 123 chr3L 14211424 intron nuf + chr3L 14211486 intron nuf + chr3L 14211547 intron nuf + chr3L_5_14210001 chr3L_14210001 RAL-513 1466 chr3L 14239974 14240006 chr3L 14240085 14240120 8 112 1.0 4.0 2.5 2.3 146 chr3L 14239974 intergenic not near genes chr3L 14240047 intergenic not near genes chr3L 14240120 intergenic not near genes chr3L_8_14240001 chr3L_14240001 RAL-513 1467 chr3L 14245570 14245594 chr3L 14245665 14245698 1360 9 106 7.5 3.0 5.2 1.5 128 chr3L 14245570 3` UTR CR44561 - chr3L 14245634 3` UTR CR44561 - chr3L 14245698 intergenic CR44561 -,CR44560 + chr3L_9_14245001 chr3L_14245001 RAL-513 1468 chr3L 14260937 14260980 chr3L 14261035 14261075 6 97 3.5 4.0 3.8 1.2 138 chr3L 14260937 intergenic not near genes chr3L 14261006 intergenic not near genes chr3L 14261075 intergenic not near genes chr3L_6_14260001 chr3L_14260001 RAL-513 1469 chr3L 14282577 14282600 chr3L 14282673 14282700 6 97 6.0 5.0 5.5 0.9 123 chr3L 14282577 intron fz + chr3L 14282638 intron fz + chr3L 14282700 intron fz + chr3L_6_14280001 chr3L_14280001 RAL-513 1470 chr3L 14295965 14296014 chr3L 14296471 14296519 roo 7 501 1.5 1.5 1.5 2.8 554 chr3L 14295965 intron fz + chr3L 14296242 intron fz + chr3L 14296519 intron fz + chr3L_7_14295001 chr3L_14295001 RAL-513 1471 chr3L 14312036 14312054 chr3L 14316850 14316850 X-element 4 4818 1.5 7.5 4.5 0.7 4814 chr3L 14312036 exon fz + chr3L 14314443 intron fz + chr3L 14316850 intron fz + chr3L_4_14310001 chr3L_14310001 RAL-513 1472 chr3L 14341428 14341436 chr3L 14341575 14341588 4 146 0.5 4.5 2.5 1.1 160 chr3L 14341428 intron fz + chr3L 14341508 intron fz + chr3L 14341588 intron fz + chr3L_4_14340001 chr3L_14340001 RAL-513 1473 chr3L 14356516 14356547 chr3L 14356601 14356621 9 85 7.0 3.0 5.0 1.5 105 chr3L 14356516 intron fz + chr3L 14356568 intron fz + chr3L 14356621 intron fz + chr3L_9_14355001 chr3L_14355001 RAL-513 1474 chr3L 14439195 14439247 chr3L 14439377 14439430 7 180 2.0 3.0 2.5 2.0 235 chr3L 14439195 intron bbg - chr3L 14439312 intron bbg - chr3L 14439430 intron bbg - chr3L_7_14435001 chr3L_14435001 RAL-513 1475 chr3L 14462880 14462911 chr3L 14462972 14463019 7 102 0.0 0.5 0.2 5.8 139 chr3L 14462880 intron bbg - chr3L 14462950 intron bbg - chr3L 14463019 intron bbg - chr3L_7_14460001 chr3L_14460001 RAL-513 1476 chr3L 14468464 14468474 chr3L 14473672 14473700 copia 4 5221 1.5 4.0 2.8 1.1 5236 chr3L 14468464 intron bbg - chr3L 14471082 intron bbg - chr3L 14473700 intron bbg - chr3L_4_14470001 chr3L_14470001 RAL-513 1477 chr3L 14485997 14486037 chr3L 14486098 14486133 11 97 7.0 1.5 4.2 2.1 136 chr3L 14485997 intron bbg - chr3L 14486065 intron bbg - chr3L 14486133 intron bbg - chr3L_11_14485001 chr3L_14485001 RAL-513 1478 chr3L 14522081 14522124 chr3L 14522200 14522242 12 112 5.5 3.0 4.2 2.3 161 chr3L 14522081 intron bbg - chr3L 14522162 intron bbg - chr3L 14522242 intron bbg - chr3L_12_14520001 chr3L_14520001 RAL-513 1479 chr3L 14555599 14555625 chr3L 14555727 14555728 5 126 3.0 2.5 2.8 1.3 129 chr3L 14555599 intergenic not near genes chr3L 14555664 intergenic not near genes chr3L 14555728 intergenic not near genes chr3L_5_14555001 chr3L_14555001 RAL-513 1480 chr3L 14565729 14565776 chr3L 14565840 14565887 8 111 5.0 1.0 3.0 2.0 158 chr3L 14565729 intergenic not near genes chr3L 14565808 intergenic not near genes chr3L 14565887 intergenic not near genes chr3L_8_14565001 chr3L_14565001 RAL-513 1481 chr3L 14584115 14584168 chr3L 14584286 14584317 15 168 2.5 5.5 4.0 3.0 202 chr3L 14584115 intron HGTX - chr3L 14584216 intron HGTX - chr3L 14584317 intron HGTX - chr3L_15_14580001 chr3L_14580001 RAL-513 1482 chr3L 14602970 14603071 chr3L 14603068 14603168 4 97 0.0 0.0 0.0 4.0 198 chr3L 14602970 intergenic not near genes chr3L 14603069 intergenic not near genes chr3L 14603168 intergenic not near genes chr3L_4_14600001 chr3L_14600001 RAL-513 1483 chr3L 14633776 14633818 chr3L 14633891 14633934 10 112 1.0 3.5 2.2 3.1 158 chr3L 14633776 intron dlp + chr3L 14633855 intron dlp + chr3L 14633934 intron dlp + chr3L_10_14630001 chr3L_14630001 RAL-513 1484 chr3L 14635688 14635721 chr3L 14635787 14635819 5 99 10.0 6.5 8.2 0.5 131 chr3L 14635688 intron dlp + chr3L 14635754 intron dlp + chr3L 14635819 intron dlp + chr3L_5_14635001 chr3L_14635001 RAL-513 1485 chr3L 14693284 14693316 chr3L 14693583 14693616 5 296 4.0 4.5 4.2 1.0 332 chr3L 14693284 intron ome + chr3L 14693450 intron ome + chr3L 14693616 intron ome + chr3L_5_14690001 chr3L_14690001 RAL-513 1486 chr3L 14721183 14721200 chr3L 14723027 14723056 Rt1c 5 1847 7.5 9.0 8.2 0.5 1873 chr3L 14721183 intron ome + chr3L 14722120 intron ome + chr3L 14723056 intron ome + chr3L_5_14720001 chr3L_14720001 RAL-513 1487 chr3L 14740877 14740922 chr3L 14740986 14741031 6 107 3.0 2.5 2.8 1.6 154 chr3L 14740877 intron ome + chr3L 14740954 intron ome + chr3L 14741031 intron ome + chr3L_6_14740001 chr3L_14740001 RAL-513 1488 chr3L 14839025 14839050 chr3L 14839126 14839159 5 104 0.5 2.0 1.2 2.3 134 chr3L 14839025 intron CG17839 + chr3L 14839092 intron CG17839 + chr3L 14839159 intron CG17839 + chr3L_5_14835001 chr3L_14835001 RAL-513 1489 chr3L 14861807 14861836 chr3L 14861884 14861936 16 90 6.5 6.5 6.5 2.1 129 chr3L 14861807 intron CG17839 + chr3L 14861872 intron CG17839 + chr3L 14861936 intron CG17839 + chr3L_16_14860001 chr3L_14860001 RAL-513 1490 chr3L 14922085 14922115 chr3L 14922213 14922225 6 119 5.0 2.0 3.5 1.3 140 chr3L 14922085 intron DCX-EMAP + chr3L 14922155 intron DCX-EMAP + chr3L 14922225 intron DCX-EMAP + chr3L_6_14920001 chr3L_14920001 RAL-513 1491 chr3L 14973623 14973664 chr3L 14973714 14973764 7 92 4.5 5.5 5.0 1.2 141 chr3L 14973623 intergenic Brd + chr3L 14973694 intergenic Brd + chr3L 14973764 intergenic not near genes chr3L_7_14970001 chr3L_14970001 RAL-513 1492 chr3L 15053397 15053449 chr3L 15053756 15053808 10 357 1.5 4.5 3.0 2.5 411 chr3L 15053397 intron Sytbeta - chr3L 15053602 intron,3` UTR Sytbeta -,CG18649 - chr3L 15053808 intron,3` UTR Sytbeta -,CG18649 - chr3L_10_15050001 chr3L_15050001 RAL-513 1493 chr3L 15085032 15085081 chr3L 15086217 15086267 1360 7 1180 4.5 2.5 3.5 1.6 1235 chr3L 15085032 intron cp309 - chr3L 15085650 intron cp309 - chr3L 15086267 intron cp309 - chr3L_7_15085001 chr3L_15085001 RAL-513 1494 chr3L 15125651 15125671 chr3L 15126094 15126104 5 438 2.5 1.5 2.0 1.7 453 chr3L 15125651 intron Cep135 + chr3L 15125878 intron Cep135 + chr3L 15126104 intron Cep135 + chr3L_5_15125001 chr3L_15125001 RAL-513 1495 chr3L 15125672 15125683 chr3L 15126091 15126096 4 432 1.5 1.5 1.5 1.6 424 chr3L 15125672 intron Cep135 + chr3L 15125884 intron Cep135 + chr3L 15126096 intron Cep135 + chr3L_4_15125001 chr3L_15125001 RAL-513 1496 chr3L 15146143 15146173 chr3L 15146240 15146282 5 98 0.0 1.5 0.8 2.8 139 chr3L 15146143 3` UTR Pex3 + chr3L 15146212 3` UTR Pex3 + chr3L 15146282 3` UTR Pex3 + chr3L_5_15145001 chr3L_15145001 RAL-513 1497 chr3L 15151202 15151242 chr3L 15151402 15151446 17 197 3.0 5.0 4.0 3.4 244 chr3L 15151202 intron FucTA + chr3L 15151324 intron FucTA + chr3L 15151446 intron FucTA + chr3L_17_15150001 chr3L_15150001 RAL-513 1498 chr3L 15209052 15209098 chr3L 15209154 15209172 10 96 3.5 3.0 3.2 2.4 120 chr3L 15209052 intergenic CG6888 + chr3L 15209112 intergenic not near genes chr3L 15209172 intergenic not near genes chr3L_10_15205001 chr3L_15205001 RAL-513 1499 chr3L 15233538 15233564 chr3L 15233638 15233665 6 99 3.0 1.5 2.2 1.9 127 chr3L 15233538 intergenic not near genes chr3L 15233602 intergenic not near genes chr3L 15233665 intergenic not near genes chr3L_6_15230001 chr3L_15230001 RAL-513 1500 chr3L 15265761 15265803 chr3L 15265848 15265893 9 91 3.0 4.5 3.8 1.9 132 chr3L 15265761 intergenic not near genes chr3L 15265827 intergenic not near genes chr3L 15265893 intergenic not near genes chr3L_9_15265001 chr3L_15265001 RAL-513 1501 chr3L 15295778 15295792 chr3L 15298611 15298654 gypsy5 5 2852 5.5 1.5 3.5 1.1 2876 chr3L 15295778 intergenic not near genes chr3L 15297216 intergenic not near genes chr3L 15298654 intergenic Best4 + chr3L_5_15295001 chr3L_15295001 RAL-513 1502 chr3L 15320898 15320906 chr3L 15320947 15321001 5 69 3.0 2.5 2.8 1.3 103 chr3L 15320898 intergenic not near genes chr3L 15320950 intergenic not near genes chr3L 15321001 intergenic not near genes chr3L_5_15320001 chr3L_15320001 RAL-513 1503 chr3L 15358344 15358362 chr3L 15358493 15358513 9 149 5.0 4.0 4.5 1.6 169 chr3L 15358344 intergenic not near genes chr3L 15358428 intergenic not near genes chr3L 15358513 intergenic not near genes chr3L_9_15355001 chr3L_15355001 RAL-513 1504 chr3L 15358372 15358393 chr3L 15358491 15358543 5 139 4.0 4.0 4.0 1.0 171 chr3L 15358372 intergenic not near genes chr3L 15358458 intergenic not near genes chr3L 15358543 intergenic not near genes chr3L_5_15355001 chr3L_15355001 RAL-513 1505 chr3L 15384947 15384988 chr3L 15385084 15385108 8 138 3.0 1.5 2.2 2.5 161 chr3L 15384947 intergenic not near genes chr3L 15385028 intergenic not near genes chr3L 15385108 intergenic not near genes chr3L_8_15385001 chr3L_15385001 RAL-513 1506 chr3L 15393649 15393682 chr3L 15393867 15393904 7 218 6.0 4.0 5.0 1.2 255 chr3L 15393649 intergenic not near genes chr3L 15393776 intergenic not near genes chr3L 15393904 intergenic not near genes chr3L_7_15390001 chr3L_15390001 RAL-513 1507 chr3L 15406003 15406052 chr3L 15406105 15406139 10 95 2.5 4.5 3.5 2.2 136 chr3L 15406003 intergenic not near genes chr3L 15406071 intergenic not near genes chr3L 15406139 intergenic not near genes chr3L_10_15405001 chr3L_15405001 RAL-513 1508 chr3L 15423746 15423783 chr3L 15426610 15426647 opus 5 2861 5.0 2.0 3.5 1.1 2901 chr3L 15423746 intergenic not near genes chr3L 15425196 intergenic not near genes chr3L 15426647 intergenic not near genes chr3L_5_15425001 chr3L_15425001 RAL-513 1509 chr3L 15444636 15444685 chr3L 15444747 15444751 10 103 6.0 3.0 4.5 1.8 115 chr3L 15444636 intergenic not near genes chr3L 15444694 intergenic not near genes chr3L 15444751 intergenic not near genes chr3L_10_15440001 chr3L_15440001 RAL-513 1510 chr3L 15466030 15466137 chr3L 15466129 15466253 6 104 0.0 0.0 0.0 6.0 223 chr3L 15466030 intergenic not near genes chr3L 15466142 intergenic not near genes chr3L 15466253 intergenic not near genes chr3L_6_15465001 chr3L_15465001 RAL-513 1511 chr3L 15482587 15482628 chr3L 15482683 15482728 16 95 2.5 2.5 2.5 4.6 141 chr3L 15482587 intergenic not near genes chr3L 15482658 intergenic not near genes chr3L 15482728 intergenic not near genes chr3L_16_15480001 chr3L_15480001 RAL-513 1512 chr3L 15489046 15489095 chr3L 15489346 15489375 13 291 3.5 4.5 4.0 2.6 329 chr3L 15489046 intergenic not near genes chr3L 15489210 intergenic not near genes chr3L 15489375 intergenic not near genes chr3L_13_15485001 chr3L_15485001 RAL-513 1513 chr3L 15531976 15532013 chr3L 15532119 15532138 7 127 13.0 14.0 13.5 0.5 162 chr3L 15531976 intergenic not near genes chr3L 15532057 intergenic not near genes chr3L 15532138 intergenic not near genes chr3L_7_15530001 chr3L_15530001 RAL-513 1514 chr3L 15600178 15600197 chr3L 15600299 15600318 4 121 5.0 4.5 4.8 0.7 140 chr3L 15600178 intron RhoGAP71E + chr3L 15600248 intron RhoGAP71E + chr3L 15600318 intron RhoGAP71E + chr3L_4_15600001 chr3L_15600001 RAL-513 1515 chr3L 15633190 15633206 chr3L 15633261 15633306 4 88 6.0 1.5 3.8 0.8 116 chr3L 15633190 intron comm3 - chr3L 15633248 intron comm3 - chr3L 15633306 intron comm3 - chr3L_4_15630001 chr3L_15630001 RAL-513 1516 chr3L 15641791 15641812 chr3L 15641896 15641899 4 100 0.0 4.0 2.0 1.3 108 chr3L 15641791 intron comm3 - chr3L 15641845 intron comm3 - chr3L 15641899 intron comm3 - chr3L_4_15640001 chr3L_15640001 RAL-513 1517 chr3L 15754472 15754610 chr3L 15754584 15754713 14 100 0.0 0.0 0.0 14.0 241 chr3L 15754472 intergenic not near genes chr3L 15754592 intergenic not near genes chr3L 15754713 intergenic not near genes chr3L_14_15750001 chr3L_15750001 RAL-513 1518 chr3L 15836246 15836269 chr3L 15836338 15836375 8 103 3.5 5.5 4.5 1.5 129 chr3L 15836246 exon CG15715 - chr3L 15836310 intron CG15715 - chr3L 15836375 intron CG15715 - chr3L_8_15835001 chr3L_15835001 RAL-513 1519 chr3L 15840419 15840465 chr3L 15840523 15840567 7 103 0.0 2.0 1.0 3.5 148 chr3L 15840419 intron CG32150 - chr3L 15840493 intron CG32150 - chr3L 15840567 intron CG32150 - chr3L_7_15840001 chr3L_15840001 RAL-513 1520 chr3L 15871595 15871614 chr3L 15871699 15871718 6 104 3.5 1.5 2.5 1.7 123 chr3L 15871595 intron pHCl - chr3L 15871656 intron pHCl - chr3L 15871718 intron pHCl - chr3L_6_15870001 chr3L_15870001 RAL-513 1521 chr3L 15899235 15899258 chr3L 15899790 15899807 jockey 4 560 2.5 3.5 3.0 1.0 572 chr3L 15899235 intergenic pHCl - chr3L 15899521 intergenic pHCl - chr3L 15899807 intergenic sff - chr3L_4_15895001 chr3L_15895001 RAL-513 1522 chr3L 15912536 15912576 chr3L 15912632 15912672 9 95 4.5 2.5 3.5 2.0 136 chr3L 15912536 intron sff - chr3L 15912604 intron sff - chr3L 15912672 intron sff - chr3L_9_15910001 chr3L_15910001 RAL-513 1523 chr3L 16070731 16070761 chr3L 16070828 16070857 6 96 3.5 2.0 2.8 1.6 126 chr3L 16070731 intron Mbs + chr3L 16070794 intron Mbs + chr3L 16070857 exon Mbs + chr3L_6_16070001 chr3L_16070001 RAL-513 1524 chr3L 16162597 16162628 chr3L 16162682 16162731 12 96 3.0 3.0 3.0 3.0 134 chr3L 16162597 intron CG5151 - chr3L 16162664 intron CG5151 - chr3L 16162731 intron CG5151 - chr3L_12_16160001 chr3L_16160001 RAL-513 1525 chr3L 16184091 16184127 chr3L 16188929 16188962 X-element 7 4836 3.5 4.5 4.0 1.4 4871 chr3L 16184091 intergenic not near genes chr3L 16186526 intergenic not near genes chr3L 16188962 intergenic not near genes chr3L_7_16185001 chr3L_16185001 RAL-513 1526 chr3L 16217008 16217027 chr3L 16217085 16217121 6 90 1.0 1.0 1.0 3.0 113 chr3L 16217008 intron CG13073 - chr3L 16217064 intron CG13073 - chr3L 16217121 5` UTR CG13073 - chr3L_6_16215001 chr3L_16215001 RAL-513 1527 chr3L 16239926 16239947 chr3L 16240022 16240042 5 93 2.5 7.5 5.0 0.8 116 chr3L 16239926 intergenic l(3)72Dr + chr3L 16239984 intergenic not near genes chr3L 16240042 intergenic not near genes chr3L_5_16235001 chr3L_16235001 RAL-513 1528 chr3L 16345246 16345258 chr3L 16345358 16345370 5 112 2.5 0.0 1.2 2.3 124 chr3L 16345246 intergenic CG4998 + chr3L 16345308 intergenic CG4998 + chr3L 16345370 intergenic CG4998 + chr3L_5_16345001 chr3L_16345001 RAL-513 1529 chr3L 16431811 16431862 chr3L 16431925 16431961 4 111 2.0 0.0 1.0 2.0 150 chr3L 16431811 intron,intron CG33158 +,dsx-c73A - chr3L 16431886 intron,intron CG33158 +,dsx-c73A - chr3L 16431961 intron,intron CG33158 +,dsx-c73A - chr3L_4_16430001 chr3L_16430001 RAL-513 1530 chr3L 16443837 16443879 chr3L 16446189 16446235 Doc 10 2355 1.5 4.5 3.0 2.5 2398 chr3L 16443837 intron,intron CG33158 +,dsx-c73A - chr3L 16445036 intron,intron CG33158 +,dsx-c73A - chr3L 16446235 intron,intron CG33158 +,dsx-c73A - chr3L_10_16445001 chr3L_16445001 RAL-513 1531 chr3L 16450004 16450052 chr3L 16450109 16450157 13 101 0.5 2.5 1.5 5.2 153 chr3L 16450004 intron,intron CG33158 +,dsx-c73A - chr3L 16450080 intron,intron CG33158 +,dsx-c73A - chr3L 16450157 intron,exon CG33158 +,dsx-c73A - chr3L_13_16450001 chr3L_16450001 RAL-513 1532 chr3L 16489854 16489862 chr3L 16489958 16489966 5 104 3.0 0.5 1.8 1.8 112 chr3L 16489854 intron CG33158 + chr3L 16489910 intron CG33158 + chr3L 16489966 intron CG33158 + chr3L_5_16485001 chr3L_16485001 RAL-513 1533 chr3L 16493964 16494012 chr3L 16494494 16494531 jockey 18 530 4.0 8.0 6.0 2.6 567 chr3L 16493964 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494248 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494531 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_18_16490001 chr3L_16490001 RAL-513 1534 chr3L 16533545 16533586 chr3L 16533675 16533700 6 119 1.5 3.5 2.5 1.7 155 chr3L 16533545 intron CG43373 - chr3L 16533622 intron CG43373 - chr3L 16533700 intron CG43373 - chr3L_6_16530001 chr3L_16530001 RAL-513 1535 chr3L 16540041 16540078 chr3L 16540141 16540186 9 104 3.5 4.5 4.0 1.8 145 chr3L 16540041 intron CG43373 - chr3L 16540114 intron CG43373 - chr3L 16540186 intron CG43373 - chr3L_9_16540001 chr3L_16540001 RAL-513 1536 chr3L 16610668 16610716 chr3L 16610773 16610821 11 103 2.5 5.5 4.0 2.2 153 chr3L 16610668 3` UTR Su(P) - chr3L 16610744 exon Su(P) - chr3L 16610821 exon Su(P) - chr3L_11_16610001 chr3L_16610001 RAL-513 1537 chr3L 16616495 16616505 chr3L 16621840 16621850 297 6 5346 11.0 10.0 10.5 0.5 5355 chr3L 16616495 3` UTR Abl - chr3L 16619172 3` UTR Abl - chr3L 16621850 3` UTR Abl - chr3L_6_16615001 chr3L_16615001 RAL-513 1538 chr3L 16616508 16616543 chr3L 16621837 16621869 297 10 5333 5.0 9.0 7.0 1.2 5361 chr3L 16616508 3` UTR Abl - chr3L 16619188 3` UTR Abl - chr3L 16621869 3` UTR Abl - chr3L_10_16615001 chr3L_16615001 RAL-513 1539 chr3L 16684005 16684035 chr3L 16689245 16689276 copia 6 5241 2.0 2.5 2.2 1.9 5271 chr3L 16684005 intron,intron Lasp -,CG43954 - chr3L 16686640 intron,intron Lasp -,CG43954 - chr3L 16689276 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_6_16685001 chr3L_16685001 RAL-513 1540 chr3L 16746840 16746851 chr3L 16746919 16746932 5 90 3.5 2.5 3.0 1.2 92 chr3L 16746840 intergenic not near genes chr3L 16746886 intergenic not near genes chr3L 16746932 intergenic not near genes chr3L_5_16745001 chr3L_16745001 RAL-513 1541 chr3L 16772473 16772513 chr3L 16772583 16772614 13 105 5.0 2.5 3.8 2.7 141 chr3L 16772473 intron Nrt + chr3L 16772544 intron Nrt + chr3L 16772614 intron Nrt + chr3L_13_16770001 chr3L_16770001 RAL-513 1542 chr3L 16808019 16808047 chr3L 16808115 16808143 5 94 4.0 1.0 2.5 1.4 124 chr3L 16808019 intron nudC + chr3L 16808081 intron nudC + chr3L 16808143 intron nudC + chr3L_5_16805001 chr3L_16805001 RAL-513 1543 chr3L 16818728 16818780 chr3L 16818824 16818876 10 93 6.0 4.0 5.0 1.7 148 chr3L 16818728 intron,intron nudC +,CG13024 - chr3L 16818802 intron,intron nudC +,CG13024 - chr3L 16818876 intron,intron nudC +,CG13024 - chr3L_10_16815001 chr3L_16815001 RAL-513 1544 chr3L 16845001 16845041 chr3L 16845134 16845173 9 132 4.5 3.0 3.8 1.9 172 chr3L 16845001 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845087 intergenic CG9669 -,CG9715 + chr3L 16845173 intergenic CG9669 -,CG9715 + chr3L_9_16845001 chr3L_16845001 RAL-513 1545 chr3L 16869562 16869571 chr3L 16869665 16869674 5 102 7.0 5.0 6.0 0.7 112 chr3L 16869562 intron Lmpt + chr3L 16869618 intron Lmpt + chr3L 16869674 intron Lmpt + chr3L_5_16865001 chr3L_16865001 RAL-513 1546 chr3L 16869576 16869608 chr3L 16869661 16869711 11 94 1.0 4.5 2.8 2.9 135 chr3L 16869576 intron Lmpt + chr3L 16869644 intron Lmpt + chr3L 16869711 intron Lmpt + chr3L_11_16865001 chr3L_16865001 RAL-513 1547 chr3L 16941382 16941405 chr3L 16941503 16941526 8 121 8.0 0.5 4.2 1.5 144 chr3L 16941382 intron Cpr73D - chr3L 16941454 intron Cpr73D - chr3L 16941526 intron Cpr73D - chr3L_8_16940001 chr3L_16940001 RAL-513 1548 chr3L 16945715 16945749 chr3L 16954887 16954922 roo 11 9164 4.5 3.5 4.0 2.2 9207 chr3L 16945715 exon Obp73a + chr3L 16950318 intergenic not near genes chr3L 16954922 5` UTR Nc73EF + chr3L_11_16950001 chr3L_16950001 RAL-513 1549 chr3L 17026771 17026822 chr3L 17026872 17026904 6 91 5.5 1.0 3.2 1.4 133 chr3L 17026771 exon Fit2 + chr3L 17026838 3` UTR Fit2 + chr3L 17026904 3` UTR Fit2 + chr3L_6_17025001 chr3L_17025001 RAL-513 1550 chr3L 17027146 17027186 chr3L 17027258 17027275 7 105 1.5 1.0 1.2 3.2 129 chr3L 17027146 intergenic Fit2 +,CG7730 + chr3L 17027210 intergenic Fit2 +,CG7730 + chr3L 17027275 intergenic Fit2 +,CG7730 + chr3L_7_17025001 chr3L_17025001 RAL-513 1551 chr3L 17034918 17034947 chr3L 17035124 17035155 G2 6 206 2.0 1.0 1.5 2.4 237 chr3L 17034918 intergenic not near genes chr3L 17035036 intergenic not near genes chr3L 17035155 intergenic not near genes chr3L_6_17035001 chr3L_17035001 RAL-513 1552 chr3L 17084998 17085010 chr3L 17094167 17094179 roo 4 9168 8.5 5.5 7.0 0.5 9181 chr3L 17084998 intron Rbp6 - chr3L 17089588 intron Rbp6 - chr3L 17094179 intron Rbp6 - chr3L_4_17085001 chr3L_17085001 RAL-513 1553 chr3L 17085011 17085033 chr3L 17094166 17094176 roo 5 9160 5.5 5.5 5.5 0.8 9165 chr3L 17085011 intron Rbp6 - chr3L 17089594 intron Rbp6 - chr3L 17094176 intron Rbp6 - chr3L_5_17085001 chr3L_17085001 RAL-513 1554 chr3L 17149146 17149181 chr3L 17149246 17149252 6 93 6.5 0.0 3.2 1.4 106 chr3L 17149146 intron Rbp6 - chr3L 17149199 intron Rbp6 - chr3L 17149252 intron Rbp6 - chr3L_6_17145001 chr3L_17145001 RAL-513 1555 chr3L 17195519 17195535 chr3L 17195850 17195853 7 345 3.5 3.0 3.2 1.7 334 chr3L 17195519 intron Rbp6 - chr3L 17195686 intron Rbp6 - chr3L 17195853 intron Rbp6 - chr3L_7_17195001 chr3L_17195001 RAL-513 1556 chr3L 17272228 17272235 chr3L 17272379 17272388 4 152 3.0 4.5 3.8 0.8 160 chr3L 17272228 intergenic not near genes chr3L 17272308 intergenic not near genes chr3L 17272388 intergenic not near genes chr3L_4_17270001 chr3L_17270001 RAL-513 1557 chr3L 17272236 17272263 chr3L 17272377 17272412 6 147 0.0 3.5 1.8 2.1 176 chr3L 17272236 intergenic not near genes chr3L 17272324 intergenic not near genes chr3L 17272412 intergenic not near genes chr3L_6_17270001 chr3L_17270001 RAL-513 1558 chr3L 17510737 17510764 chr3L 17510841 17510867 4 104 2.5 4.0 3.2 1.0 130 chr3L 17510737 exon Oatp74D + chr3L 17510802 intron Oatp74D + chr3L 17510867 intron Oatp74D + chr3L_4_17510001 chr3L_17510001 RAL-513 1559 chr3L 17516966 17516993 chr3L 17524539 17524571 412 7 7573 10.0 3.0 6.5 0.9 7605 chr3L 17516966 intron CG7564 + chr3L 17520768 intron CG7564 + chr3L 17524571 3` UTR CG7564 + chr3L_7_17520001 chr3L_17520001 RAL-513 1560 chr3L 17516994 17517012 chr3L 17524538 17524566 412 12 7562 6.5 3.0 4.8 2.1 7572 chr3L 17516994 intron CG7564 + chr3L 17520780 intron CG7564 + chr3L 17524566 3` UTR CG7564 + chr3L_12_17520001 chr3L_17520001 RAL-513 1561 chr3L 17585329 17585341 chr3L 17585635 17585674 5 311 13.0 34.5 23.8 0.2 345 chr3L 17585329 intron Eip74EF - chr3L 17585502 intron Eip74EF - chr3L 17585674 intron Eip74EF - chr3L_5_17585001 chr3L_17585001 RAL-513 1562 chr3L 17612214 17612246 chr3L 17612300 17612351 12 94 4.0 1.5 2.8 3.2 137 chr3L 17612214 intron Eip74EF - chr3L 17612282 intron Eip74EF - chr3L 17612351 intron Eip74EF - chr3L_12_17610001 chr3L_17610001 RAL-513 1563 chr3L 17634351 17634405 chr3L 17634464 17634482 13 101 4.0 2.0 3.0 3.2 131 chr3L 17634351 intron CG7497 + chr3L 17634416 intron CG7497 + chr3L 17634482 intron CG7497 + chr3L_13_17630001 chr3L_17630001 RAL-513 1564 chr3L 17645299 17645335 chr3L 17645378 17645432 6 85 3.5 2.0 2.8 1.6 133 chr3L 17645299 intergenic CG43085 -,Pep - chr3L 17645366 intergenic CG43085 -,Pep - chr3L 17645432 intergenic CG43085 -,Pep - chr3L_6_17645001 chr3L_17645001 RAL-513 1565 chr3L 17730834 17730859 chr3L 17738184 17738209 mdg1 7 7349 3.5 5.0 4.2 1.3 7375 chr3L 17730834 intron Ccn + chr3L 17734522 intron Ccn + chr3L 17738209 intron Ccn + chr3L_7_17730001 chr3L_17730001 RAL-513 1566 chr3L 17789828 17789844 chr3L 17789924 17789940 7 96 7.0 2.0 4.5 1.3 112 chr3L 17789828 intergenic not near genes chr3L 17789884 intergenic not near genes chr3L 17789940 intergenic not near genes chr3L_7_17785001 chr3L_17785001 RAL-513 1567 chr3L 17789853 17789871 chr3L 17789923 17789962 4 84 4.5 2.0 3.2 1.0 109 chr3L 17789853 intergenic not near genes chr3L 17789908 intergenic not near genes chr3L 17789962 intergenic not near genes chr3L_4_17785001 chr3L_17785001 RAL-513 1568 chr3L 17799797 17799834 chr3L 17801604 17801641 S-element 4 1800 3.0 3.5 3.2 1.0 1844 chr3L 17799797 intron NUCB1 - chr3L 17800719 intron NUCB1 - chr3L 17801641 intron NUCB1 - chr3L_4_17800001 chr3L_17800001 RAL-513 1569 chr3L 17834318 17834354 chr3L 17834501 17834537 6 182 0.0 3.0 1.5 2.4 219 chr3L 17834318 intron Grd + chr3L 17834428 intron Grd + chr3L 17834537 intron Grd + chr3L_6_17830001 chr3L_17830001 RAL-513 1570 chr3L 17837617 17837656 chr3L 17837713 17837746 10 103 1.0 3.5 2.2 3.1 129 chr3L 17837617 exon Grd + chr3L 17837682 intron Grd + chr3L 17837746 exon Grd + chr3L_10_17835001 chr3L_17835001 RAL-513 1571 chr3L 17918377 17918400 chr3L 17921173 17921222 opus 4 2816 3.5 2.5 3.0 1.0 2845 chr3L 17918377 intergenic not near genes chr3L 17919800 intergenic not near genes chr3L 17921222 intergenic not near genes chr3L_4_17915001 chr3L_17915001 RAL-513 1572 chr3L 17991565 17991578 chr3L 17991662 17991674 7 97 6.5 3.5 5.0 1.2 109 chr3L 17991565 intron Eip75B - chr3L 17991620 intron Eip75B - chr3L 17991674 intron Eip75B - chr3L_7_17990001 chr3L_17990001 RAL-513 1573 chr3L 17991586 17991589 chr3L 17991661 17991685 5 92 5.0 3.5 4.2 1.0 99 chr3L 17991586 intron Eip75B - chr3L 17991636 intron Eip75B - chr3L 17991685 intron Eip75B - chr3L_5_17990001 chr3L_17990001 RAL-513 1574 chr3L 18047718 18047736 chr3L 18056795 18056804 roo 5 9075 0.5 3.5 2.0 1.7 9086 chr3L 18047718 intron Eip75B - chr3L 18052261 intron Eip75B - chr3L 18056804 intron Eip75B - chr3L_5_18050001 chr3L_18050001 RAL-513 1575 chr3L 18087585 18087619 chr3L 18087705 18087721 8 116 2.0 5.0 3.5 1.8 136 chr3L 18087585 intergenic CG34253 - chr3L 18087653 intergenic CG34253 - chr3L 18087721 intergenic CG34253 - chr3L_8_18085001 chr3L_18085001 RAL-513 1576 chr3L 18092764 18092788 chr3L 18092899 18092908 4 131 7.0 0.0 3.5 0.9 144 chr3L 18092764 intron CG13698 - chr3L 18092836 intron CG13698 - chr3L 18092908 intron CG13698 - chr3L_4_18090001 chr3L_18090001 RAL-513 1577 chr3L 18119657 18119681 chr3L 18119745 18119751 6 98 0.0 4.5 2.2 1.9 94 chr3L 18119657 intron CG7341 + chr3L 18119704 intron CG7341 + chr3L 18119751 intron CG7341 + chr3L_6_18115001 chr3L_18115001 RAL-513 1578 chr3L 18124397 18124430 chr3L 18124499 18124534 6 102 0.5 1.5 1.0 3.0 137 chr3L 18124397 intergenic not near genes chr3L 18124466 intergenic not near genes chr3L 18124534 intergenic not near genes chr3L_6_18120001 chr3L_18120001 RAL-513 1579 chr3L 18138223 18138256 chr3L 18138314 18138360 7 99 4.0 2.5 3.2 1.7 137 chr3L 18138223 intergenic not near genes chr3L 18138292 intergenic not near genes chr3L 18138360 intergenic not near genes chr3L_7_18135001 chr3L_18135001 RAL-513 1580 chr3L 18152729 18152754 chr3L 18152846 18152855 6 119 7.5 4.5 6.0 0.9 126 chr3L 18152729 intron CG7330 + chr3L 18152792 intron CG7330 + chr3L 18152855 intron CG7330 + chr3L_6_18150001 chr3L_18150001 RAL-513 1581 chr3L 18172563 18172591 chr3L 18172678 18172702 5 108 1.5 0.0 0.8 2.8 139 chr3L 18172563 intron W - chr3L 18172632 intron W - chr3L 18172702 intron W - chr3L_5_18170001 chr3L_18170001 RAL-513 1582 chr3L 18203580 18203624 chr3L 18203695 18203727 8 108 3.0 0.0 1.5 3.2 147 chr3L 18203580 3` UTR CG7320 + chr3L 18203654 intergenic CG7320 + chr3L 18203727 intergenic CG7320 + chr3L_8_18200001 chr3L_18200001 RAL-513 1583 chr3L 18223153 18223183 chr3L 18223256 18223295 6 101 4.0 0.0 2.0 2.0 142 chr3L 18223153 intergenic not near genes chr3L 18223224 intergenic not near genes chr3L 18223295 intergenic not near genes chr3L_6_18220001 chr3L_18220001 RAL-513 1584 chr3L 18248934 18248988 chr3L 18249051 18249075 9 106 0.5 2.0 1.2 4.1 141 chr3L 18248934 intergenic not near genes chr3L 18249004 intergenic not near genes chr3L 18249075 intergenic not near genes chr3L_9_18245001 chr3L_18245001 RAL-513 1585 chr3L 18262453 18262488 chr3L 18262556 18262591 10 97 1.0 3.0 2.0 3.3 138 chr3L 18262453 intergenic not near genes chr3L 18262522 intergenic not near genes chr3L 18262591 intergenic not near genes chr3L_10_18260001 chr3L_18260001 RAL-513 1586 chr3L 18359587 18359616 chr3L 18359690 18359695 5 98 8.0 3.0 5.5 0.8 108 chr3L 18359587 intergenic not near genes chr3L 18359641 intergenic not near genes chr3L 18359695 intergenic not near genes chr3L_5_18355001 chr3L_18355001 RAL-513 1587 chr3L 18408713 18408748 chr3L 18408818 18408853 10 105 1.5 0.5 1.0 5.0 140 chr3L 18408713 intergenic not near genes chr3L 18408783 intergenic not near genes chr3L 18408853 intergenic not near genes chr3L_10_18405001 chr3L_18405001 RAL-513 1588 chr3L 9013689 9013694 chr3L 18417066 18417066 9 9403375 24.5 15.0 19.8 0.4 9403377 chr3L 9013689 intron Doc2 - chr3L 13715378 intron bru-3 - chr3L 18417066 intergenic not near genes chr3L_9_13715001 chr3L_13715001 RAL-513 1589 chr3L 18436040 18436079 chr3L 18436158 18436197 7 116 3.0 0.5 1.8 2.5 157 chr3L 18436040 intergenic not near genes chr3L 18436118 intergenic not near genes chr3L 18436197 intergenic not near genes chr3L_7_18435001 chr3L_18435001 RAL-513 1590 chr3L 18437326 18437376 chr3L 18437433 18437483 11 103 2.5 3.5 3.0 2.8 157 chr3L 18437326 intergenic not near genes chr3L 18437404 intergenic not near genes chr3L 18437483 intergenic not near genes chr3L_11_18435001 chr3L_18435001 RAL-513 1591 chr3L 18448605 18448620 chr3L 18448714 18448732 5 111 2.0 1.0 1.5 2.0 127 chr3L 18448605 intergenic not near genes chr3L 18448668 intergenic not near genes chr3L 18448732 intergenic not near genes chr3L_5_18445001 chr3L_18445001 RAL-513 1592 chr3L 18456255 18456302 chr3L 18456363 18456408 10 102 4.0 4.0 4.0 2.0 153 chr3L 18456255 intergenic CR44670 - chr3L 18456332 intergenic CR44670 - chr3L 18456408 3` UTR CR44670 - chr3L_10_18455001 chr3L_18455001 RAL-513 1593 chr3L 18464466 18464515 chr3L 18464572 18464613 10 97 4.5 4.0 4.2 1.9 147 chr3L 18464466 intergenic not near genes chr3L 18464540 intergenic not near genes chr3L 18464613 intergenic not near genes chr3L_10_18460001 chr3L_18460001 RAL-513 1594 chr3L 18506135 18506163 chr3L 18509597 18509613 F-element 11 3472 2.5 2.0 2.2 3.4 3478 chr3L 18506135 intergenic not near genes chr3L 18507874 intergenic not near genes chr3L 18509613 intergenic not near genes chr3L_11_18505001 chr3L_18505001 RAL-513 1595 chr3L 18528605 18528653 chr3L 18537786 18537831 roo 10 9179 4.0 1.5 2.8 2.6 9226 chr3L 18528605 intergenic not near genes chr3L 18533218 intergenic not near genes chr3L 18537831 intergenic not near genes chr3L_10_18530001 chr3L_18530001 RAL-513 1596 chr3L 18546686 18546736 chr3L 18546798 18546849 12 108 2.0 5.5 3.8 2.5 163 chr3L 18546686 intergenic not near genes chr3L 18546768 intergenic not near genes chr3L 18546849 intergenic not near genes chr3L_12_18545001 chr3L_18545001 RAL-513 1597 chr3L 18585529 18585557 chr3L 18585625 18585649 5 95 5.5 3.5 4.5 0.9 120 chr3L 18585529 intergenic not near genes chr3L 18585589 intergenic not near genes chr3L 18585649 intergenic not near genes chr3L_5_18585001 chr3L_18585001 RAL-513 1598 chr3L 18590248 18590289 chr3L 18590350 18590364 14 96 2.5 5.5 4.0 2.8 116 chr3L 18590248 intergenic CG7271 + chr3L 18590306 intergenic CG7271 + chr3L 18590364 intergenic CG7271 + chr3L_14_18590001 chr3L_18590001 RAL-513 1599 chr3L 18593940 18593949 chr3L 18595939 18595947 Doc 6 2000 4.0 0.0 2.0 2.0 2007 chr3L 18593940 intergenic term - chr3L 18594944 intergenic not near genes chr3L 18595947 intergenic CR45389 + chr3L_6_18590001 chr3L_18590001 RAL-513 1600 chr3L 18665193 18665214 chr3L 18665296 18665303 5 101 7.5 0.0 3.8 1.0 110 chr3L 18665193 intron MYPT-75D + chr3L 18665248 intron MYPT-75D + chr3L 18665303 intron MYPT-75D + chr3L_5_18665001 chr3L_18665001 RAL-513 1601 chr3L 18692678 18692695 chr3L 18692783 18692783 4 98 3.5 2.0 2.8 1.1 105 chr3L 18692678 intergenic not near genes chr3L 18692730 intergenic not near genes chr3L 18692783 intergenic not near genes chr3L_4_18690001 chr3L_18690001 RAL-513 1602 chr3L 18710775 18710792 chr3L 18718745 18718762 Stalker2 6 7968 2.5 1.5 2.0 2.0 7987 chr3L 18710775 intergenic not near genes chr3L 18714768 intergenic not near genes chr3L 18718762 intergenic not near genes chr3L_6_18710001 chr3L_18710001 RAL-513 1603 chr3L 18721770 18721800 chr3L 18721881 18721884 7 106 3.0 5.5 4.2 1.3 114 chr3L 18721770 intergenic CG12477 - chr3L 18721827 intergenic CG12477 - chr3L 18721884 intergenic CG12477 - chr3L_7_18720001 chr3L_18720001 RAL-513 1604 chr3L 18730357 18730402 chr3L 18730556 18730602 13 195 3.0 4.0 3.5 2.9 245 chr3L 18730357 intergenic not near genes chr3L 18730480 intergenic not near genes chr3L 18730602 intergenic not near genes chr3L_13_18730001 chr3L_18730001 RAL-513 1605 chr3L 18753527 18753567 chr3L 18753629 18753635 5 95 3.5 3.0 3.2 1.2 108 chr3L 18753527 intron ftz-f1 - chr3L 18753581 intron ftz-f1 - chr3L 18753635 intron ftz-f1 - chr3L_5_18750001 chr3L_18750001 RAL-513 1606 chr3L 18772391 18772411 chr3L 18781092 18781111 roo 7 8700 6.0 7.5 6.8 0.9 8720 chr3L 18772391 intron ftz-f1 - chr3L 18776751 intron ftz-f1 - chr3L 18781111 intron ftz-f1 - chr3L_7_18775001 chr3L_18775001 RAL-513 1607 chr3L 18772424 18772438 chr3L 18781091 18781139 roo 7 8682 2.0 7.5 4.8 1.2 8715 chr3L 18772424 intron ftz-f1 - chr3L 18776782 intron ftz-f1 - chr3L 18781139 intron ftz-f1 - chr3L_7_18775001 chr3L_18775001 RAL-513 1608 chr3L 18797310 18797326 chr3L 18797414 18797414 5 100 2.5 5.0 3.8 1.0 104 chr3L 18797310 intron ftz-f1 - chr3L 18797362 intron ftz-f1 - chr3L 18797414 intron ftz-f1 - chr3L_5_18795001 chr3L_18795001 RAL-513 1609 chr3L 18809621 18809664 chr3L 18809766 18809808 14 144 1.5 4.0 2.8 3.7 187 chr3L 18809621 intron CG14073 - chr3L 18809714 intron CG14073 - chr3L 18809808 intron CG14073 - chr3L_14_18805001 chr3L_18805001 RAL-513 1610 chr3L 18810106 18810126 chr3L 18810254 18810274 8 146 7.5 3.0 5.2 1.3 168 chr3L 18810106 intron CG14073 - chr3L 18810190 intron CG14073 - chr3L 18810274 intron CG14073 - chr3L_8_18810001 chr3L_18810001 RAL-513 1611 chr3L 18810136 18810151 chr3L 18810248 18810296 6 141 3.0 3.0 3.0 1.5 160 chr3L 18810136 intron CG14073 - chr3L 18810216 intron CG14073 - chr3L 18810296 intron CG14073 - chr3L_6_18810001 chr3L_18810001 RAL-513 1612 chr3L 18843847 18843884 chr3L 18843963 18843977 7 107 3.0 1.5 2.2 2.2 130 chr3L 18843847 intron Indy - chr3L 18843912 intron Indy - chr3L 18843977 intron Indy - chr3L_7_18840001 chr3L_18840001 RAL-513 1613 chr3L 18924468 18924479 chr3L 18924557 18924574 4 94 2.5 0.0 1.2 1.8 106 chr3L 18924468 intron CG32204 - chr3L 18924521 intron CG32204 - chr3L 18924574 intron CG32204 - chr3L_4_18920001 chr3L_18920001 RAL-513 1614 chr3L 18932335 18932371 chr3L 18932487 18932487 8 140 4.0 0.5 2.2 2.5 152 chr3L 18932335 intron CG32204 - chr3L 18932411 intron CG32204 - chr3L 18932487 intron CG32204 - chr3L_8_18930001 chr3L_18930001 RAL-513 1615 chr3L 18935820 18935853 chr3L 18935929 18935962 8 105 1.0 1.0 1.0 4.0 142 chr3L 18935820 intron CG32204 - chr3L 18935891 intron CG32204 - chr3L 18935962 intron CG32204 - chr3L_8_18935001 chr3L_18935001 RAL-513 1616 chr3L 18950997 18951047 chr3L 18951094 18951138 14 92 7.0 4.5 5.8 2.1 141 chr3L 18950997 intron CG6836 + chr3L 18951068 intron CG6836 + chr3L 18951138 intron CG6836 + chr3L_14_18950001 chr3L_18950001 RAL-513 1617 chr3L 18969533 18969577 chr3L 18969628 18969673 15 89 2.0 5.0 3.5 3.3 140 chr3L 18969533 intergenic not near genes chr3L 18969603 intergenic not near genes chr3L 18969673 intergenic not near genes chr3L_15_18965001 chr3L_18965001 RAL-513 1618 chr3L 19008835 19008876 chr3L 19009176 19009181 jockey 14 348 1.0 3.5 2.2 4.4 346 chr3L 19008835 intron nkd - chr3L 19009008 intron nkd - chr3L 19009181 intron nkd - chr3L_14_19005001 chr3L_19005001 RAL-513 1619 chr3L 19015181 19015217 chr3L 19015265 19015314 8 99 1.0 0.5 0.8 4.4 133 chr3L 19015181 intron nkd - chr3L 19015248 intron nkd - chr3L 19015314 intron nkd - chr3L_8_19015001 chr3L_19015001 RAL-513 1620 chr3L 19115625 19115657 chr3L 19115817 19115857 BS 12 195 6.5 1.5 4.0 2.4 232 chr3L 19115625 intron CG14082 - chr3L 19115741 intron CG14082 - chr3L 19115857 intron CG14082 - chr3L_12_19115001 chr3L_19115001 RAL-513 1621 chr3L 19117025 19117050 chr3L 19124492 19124517 mdg1 4 7467 8.5 4.5 6.5 0.5 7492 chr3L 19117025 intron CG14082 - chr3L 19120771 intron CG14082 - chr3L 19124517 intron CG14082 - chr3L_4_19120001 chr3L_19120001 RAL-513 1622 chr3L 19117052 19117076 chr3L 19124487 19124543 mdg1 18 7453 4.0 4.0 4.0 3.6 7491 chr3L 19117052 intron CG14082 - chr3L 19120798 intron CG14082 - chr3L 19124543 intron CG14082 - chr3L_18_19120001 chr3L_19120001 RAL-513 1623 chr3L 19127359 19127377 chr3L 19127445 19127451 7 84 9.0 7.0 8.0 0.8 92 chr3L 19127359 intron CG14082 - chr3L 19127405 intron CG14082 - chr3L 19127451 intron CG14082 - chr3L_7_19125001 chr3L_19125001 RAL-513 1624 chr3L 19127379 19127394 chr3L 19127442 19127456 4 67 5.0 7.5 6.2 0.6 77 chr3L 19127379 intron CG14082 - chr3L 19127418 intron CG14082 - chr3L 19127456 intron CG14082 - chr3L_4_19125001 chr3L_19125001 RAL-513 1625 chr3L 19127713 19127765 chr3L 19127818 19127819 15 97 2.0 7.5 4.8 2.6 106 chr3L 19127713 intron CG14082 - chr3L 19127766 intron CG14082 - chr3L 19127819 intron CG14082 - chr3L_15_19125001 chr3L_19125001 RAL-513 1626 chr3L 19135079 19135114 chr3L 19135251 19135286 11 169 1.0 3.5 2.2 3.4 207 chr3L 19135079 intron CG14082 - chr3L 19135182 intron CG14082 - chr3L 19135286 intron CG14082 - chr3L_11_19135001 chr3L_19135001 RAL-513 1627 chr3L 19182368 19182396 chr3L 19182468 19182497 6 101 5.5 3.0 4.2 1.2 129 chr3L 19182368 intron fz2 - chr3L 19182432 intron fz2 - chr3L 19182497 intron fz2 - chr3L_6_19180001 chr3L_19180001 RAL-513 1628 chr3L 19182399 19182418 chr3L 19182466 19182511 7 85 3.5 2.5 3.0 1.8 112 chr3L 19182399 intron fz2 - chr3L 19182455 intron fz2 - chr3L 19182511 intron fz2 - chr3L_7_19180001 chr3L_19180001 RAL-513 1629 chr3L 19184949 19184975 chr3L 19185046 19185074 8 97 6.0 4.5 5.2 1.3 125 chr3L 19184949 intron fz2 - chr3L 19185012 intron fz2 - chr3L 19185074 intron fz2 - chr3L_8_19185001 chr3L_19185001 RAL-513 1630 chr3L 19184976 19184983 chr3L 19185042 19185081 4 90 4.0 4.0 4.0 0.8 105 chr3L 19184976 intron fz2 - chr3L 19185028 intron fz2 - chr3L 19185081 intron fz2 - chr3L_4_19185001 chr3L_19185001 RAL-513 1631 chr3L 19208043 19208090 chr3L 19209437 19209480 Doc 10 1390 7.5 5.0 6.2 1.4 1437 chr3L 19208043 intron fz2 - chr3L 19208762 intron fz2 - chr3L 19209480 intron fz2 - chr3L_10_19205001 chr3L_19205001 RAL-513 1632 chr3L 19220633 19220637 chr3L 22908066 22908066 6 3687431 16.0 14.5 15.2 0.4 3687433 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_6_21060001 chr3L_21060001 RAL-513 1633 chr3L 19228394 19228432 chr3L 19228504 19228545 12 111 3.5 4.0 3.8 2.5 151 chr3L 19228394 intron fz2 - chr3L 19228470 intron fz2 - chr3L 19228545 intron fz2 - chr3L_12_19225001 chr3L_19225001 RAL-513 1634 chr3L 19231334 19231386 chr3L 19231441 19231465 6 98 2.0 3.0 2.5 1.7 131 chr3L 19231334 intron fz2 - chr3L 19231400 intron fz2 - chr3L 19231465 intron fz2 - chr3L_6_19230001 chr3L_19230001 RAL-513 1635 chr3L 19248829 19248864 chr3L 19248939 19248940 4 101 3.0 2.5 2.8 1.1 111 chr3L 19248829 intergenic not near genes chr3L 19248884 intergenic not near genes chr3L 19248940 intergenic not near genes chr3L_4_19245001 chr3L_19245001 RAL-513 1636 chr3L 19269828 19269849 chr3L 19270019 19270055 10 206 2.0 3.0 2.5 2.9 227 chr3L 19269828 intron,exon CG14085 +,CG14088 - chr3L 19269942 intron,exon CG14085 +,CG14088 - chr3L 19270055 intron,exon CG14085 +,CG14088 - chr3L_10_19265001 chr3L_19265001 RAL-513 1637 chr3L 19328801 19328823 chr3L 19328981 19329014 11 188 7.0 4.0 5.5 1.7 213 chr3L 19328801 intron pip - chr3L 19328908 intron pip - chr3L 19329014 intron pip - chr3L_11_19325001 chr3L_19325001 RAL-513 1638 chr3L 19342747 19342777 chr3L 19342858 19342882 7 110 0.0 1.0 0.5 4.7 135 chr3L 19342747 3` UTR CG32206 - chr3L 19342814 3` UTR CG32206 - chr3L 19342882 3` UTR CG32206 - chr3L_7_19340001 chr3L_19340001 RAL-513 1639 chr3L 19365919 19365929 chr3L 19366007 19366046 5 103 0.0 3.5 1.8 1.8 127 chr3L 19365919 intron CG32206 - chr3L 19365982 intron CG32206 - chr3L 19366046 intron CG32206 - chr3L_5_19365001 chr3L_19365001 RAL-513 1640 chr3L 19417798 19417826 chr3L 19417898 19417925 5 95 5.5 6.5 6.0 0.7 127 chr3L 19417798 intergenic not near genes chr3L 19417862 intergenic not near genes chr3L 19417925 intergenic not near genes chr3L_5_19415001 chr3L_19415001 RAL-513 1641 chr3L 19426768 19426780 chr3L 19426826 19426871 6 85 3.5 6.0 4.8 1.0 103 chr3L 19426768 intergenic not near genes chr3L 19426820 intergenic not near genes chr3L 19426871 intergenic not near genes chr3L_6_19425001 chr3L_19425001 RAL-513 1642 chr3L 19462006 19462049 chr3L 19462141 19462183 6 132 4.0 4.5 4.2 1.2 177 chr3L 19462006 intergenic not near genes chr3L 19462094 intergenic not near genes chr3L 19462183 intergenic not near genes chr3L_6_19460001 chr3L_19460001 RAL-513 1643 chr3L 19462494 19462531 chr3L 19462973 19463010 6 472 3.5 1.5 2.5 1.7 516 chr3L 19462494 intergenic not near genes chr3L 19462752 intergenic not near genes chr3L 19463010 intergenic not near genes chr3L_6_19460001 chr3L_19460001 RAL-513 1644 chr3L 19498429 19498476 chr3L 19503658 19503682 8 5214 31.5 27.5 29.5 0.3 5253 chr3L 19498429 3` UTR CG9451 - chr3L 19501056 3` UTR CG9452 - chr3L 19503682 5` UTR CG9452 - chr3L_8_19500001 chr3L_19500001 RAL-513 1645 chr3L 19527911 19527955 chr3L 19528010 19528054 9 99 6.0 3.0 4.5 1.6 143 chr3L 19527911 intergenic not near genes chr3L 19527982 intergenic not near genes chr3L 19528054 intergenic not near genes chr3L_9_19525001 chr3L_19525001 RAL-513 1646 chr3L 19670094 19670133 chr3L 19670208 19670246 12 111 5.0 2.0 3.5 2.7 152 chr3L 19670094 intergenic not near genes chr3L 19670170 intergenic not near genes chr3L 19670246 intergenic not near genes chr3L_12_19670001 chr3L_19670001 RAL-513 1647 chr3L 19861803 19861844 chr3L 19863611 19863637 S-element 10 1803 5.0 4.5 4.8 1.7 1834 chr3L 19861803 5` UTR CR45433 + chr3L 19862720 intergenic not near genes chr3L 19863637 intergenic not near genes chr3L_10_19860001 chr3L_19860001 RAL-513 1648 chr3L 19905159 19905210 chr3L 19905507 19905558 16 347 3.0 2.5 2.8 4.2 399 chr3L 19905159 intron,intron Mi-2 -,Su(Tpl) - chr3L 19905358 intron,intron Mi-2 -,Su(Tpl) - chr3L 19905558 intron,intron Mi-2 -,Su(Tpl) - chr3L_16_19905001 chr3L_19905001 RAL-513 1649 chr3L 19933522 19933562 chr3L 19934363 19934403 12 839 7.0 2.5 4.8 2.1 881 chr3L 19933522 intergenic CR45678 + chr3L 19933962 5` UTR CR45678 + chr3L 19934403 intergenic CR45678 + chr3L_12_19930001 chr3L_19930001 RAL-513 1650 chr3L 19949742 19949784 chr3L 19949840 19949878 7 97 5.5 1.5 3.5 1.6 136 chr3L 19949742 intron Ac76E + chr3L 19949810 intron Ac76E + chr3L 19949878 intron Ac76E + chr3L_7_19945001 chr3L_19945001 RAL-513 1651 chr3L 19961246 19961274 chr3L 19961342 19961371 8 94 6.5 1.0 3.8 1.7 125 chr3L 19961246 intron Ac76E + chr3L 19961308 intron Ac76E + chr3L 19961371 intron Ac76E + chr3L_8_19960001 chr3L_19960001 RAL-513 1652 chr3L 19961275 19961381 chr3L 19961341 19961477 11 85 1.0 1.0 1.0 5.5 202 chr3L 19961275 intron Ac76E + chr3L 19961376 intron Ac76E + chr3L 19961477 intron Ac76E + chr3L_11_19960001 chr3L_19960001 RAL-513 1653 chr3L 19981186 19981229 chr3L 19981286 19981300 13 94 5.0 4.5 4.8 2.2 114 chr3L 19981186 intergenic CG17732 + chr3L 19981243 intergenic CG17732 + chr3L 19981300 intergenic CG17732 + chr3L_13_19980001 chr3L_19980001 RAL-513 1654 chr3L 20101877 20101898 chr3L 20101974 20101974 6 88 3.5 7.5 5.5 0.9 97 chr3L 20101877 intron CG14186 - chr3L 20101926 intron CG14186 - chr3L 20101974 intron CG14186 - chr3L_6_20100001 chr3L_20100001 RAL-513 1655 chr3L 20101902 20101908 chr3L 20101972 20101989 4 81 4.0 7.0 5.5 0.6 87 chr3L 20101902 intron CG14186 - chr3L 20101946 intron CG14186 - chr3L 20101989 intron CG14186 - chr3L_4_20100001 chr3L_20100001 RAL-513 1656 chr3L 20113656 20113688 chr3L 20122919 20122960 roo 5 9266 2.0 3.0 2.5 1.4 9304 chr3L 20113656 intergenic not near genes chr3L 20118308 intergenic not near genes chr3L 20122960 intergenic not near genes chr3L_5_20115001 chr3L_20115001 RAL-513 1657 chr3L 20143069 20143077 chr3L 20143169 20143177 7 100 8.5 4.0 6.2 1.0 108 chr3L 20143069 intergenic not near genes chr3L 20143123 intergenic not near genes chr3L 20143177 intergenic not near genes chr3L_7_20140001 chr3L_20140001 RAL-513 1658 chr3L 20143079 20143107 chr3L 20143167 20143207 7 93 4.0 3.5 3.8 1.5 128 chr3L 20143079 intergenic not near genes chr3L 20143143 intergenic not near genes chr3L 20143207 intergenic not near genes chr3L_7_20140001 chr3L_20140001 RAL-513 1659 chr3L 20150721 20150743 chr3L 20150872 20150894 4 150 3.5 1.5 2.5 1.1 173 chr3L 20150721 3` UTR CG42674 - chr3L 20150808 3` UTR CG42674 - chr3L 20150894 3` UTR CG42674 - chr3L_4_20150001 chr3L_20150001 RAL-513 1660 chr3L 20177247 20177273 chr3L 20177329 20177378 11 99 1.5 3.5 2.5 3.1 131 chr3L 20177247 intron CG42674 - chr3L 20177312 intron CG42674 - chr3L 20177378 intron CG42674 - chr3L_11_20175001 chr3L_20175001 RAL-513 1661 chr3L 20187449 20187478 chr3L 20187546 20187577 4 96 20.0 23.0 21.5 0.2 128 chr3L 20187449 intron CG42674 - chr3L 20187513 intron CG42674 - chr3L 20187577 intron CG42674 - chr3L_4_20185001 chr3L_20185001 RAL-513 1662 chr3L 20257334 20257343 chr3L 20258461 20258477 pogo 4 1133 7.0 6.0 6.5 0.5 1143 chr3L 20257334 intron rdgC + chr3L 20257906 intron rdgC + chr3L 20258477 intron rdgC + chr3L_4_20255001 chr3L_20255001 RAL-513 1663 chr3L 20257346 20257358 chr3L 20258454 20258493 pogo 4 1127 4.5 4.0 4.2 0.8 1147 chr3L 20257346 intron rdgC + chr3L 20257920 intron rdgC + chr3L 20258493 intron rdgC + chr3L_4_20255001 chr3L_20255001 RAL-513 1664 chr3L 20290304 20290345 chr3L 20290405 20290446 10 95 3.5 6.0 4.8 1.7 142 chr3L 20290304 intron gogo - chr3L 20290375 intron gogo - chr3L 20290446 intron gogo - chr3L_10_20290001 chr3L_20290001 RAL-513 1665 chr3L 20423006 20423040 chr3L 20423224 20423258 10 224 3.0 4.5 3.8 2.1 252 chr3L 20423006 exon zye + chr3L 20423132 exon zye + chr3L 20423258 exon zye + chr3L_10_20420001 chr3L_20420001 RAL-513 1666 chr3L 20462566 20462601 chr3L 20462667 20462701 6 101 2.5 1.5 2.0 2.0 135 chr3L 20462566 intron atk - chr3L 20462634 intron atk - chr3L 20462701 intron atk - chr3L_6_20460001 chr3L_20460001 RAL-513 1667 chr3L 20476734 20476785 chr3L 20484353 20484389 springer 16 7616 3.0 3.0 3.0 4.0 7655 chr3L 20476734 3` UTR isoQC + chr3L 20480562 intergenic not near genes chr3L 20484389 3` UTR ZnT77C - chr3L_16_20480001 chr3L_20480001 RAL-513 1668 chr3L 20590076 20590097 chr3L 20590602 20590619 412 4 532 1.0 2.5 1.8 1.4 543 chr3L 20590076 intergenic not near genes chr3L 20590348 intergenic not near genes chr3L 20590619 intergenic not near genes chr3L_4_20590001 chr3L_20590001 RAL-513 1669 chr3L 20695361 20695392 chr3L 20695450 20695454 12 92 7.0 6.0 6.5 1.6 93 chr3L 20695361 5` UTR kni - chr3L 20695408 intergenic kni - chr3L 20695454 intergenic kni - chr3L_12_20695001 chr3L_20695001 RAL-513 1670 chr3L 20795300 20795338 chr3L 20795388 20795439 13 102 2.5 2.0 2.2 4.1 139 chr3L 20795300 3` UTR CR43705 - chr3L 20795370 intron CR43705 - chr3L 20795439 intron CR43705 - chr3L_13_20795001 chr3L_20795001 RAL-513 1671 chr3L 20821287 20821307 chr3L 20824776 20824933 NOF 7 3508 3.0 9.0 6.0 1.0 3646 chr3L 20821287 intron Pka-R1 + chr3L 20823110 intron Pka-R1 + chr3L 20824933 intron Pka-R1 + chr3L_7_20820001 chr3L_20820001 RAL-513 1672 chr3L 20849258 20849301 chr3L 20849357 20849369 9 94 2.5 3.0 2.8 2.4 111 chr3L 20849258 intron CG32432 - chr3L 20849314 intron CG32432 - chr3L 20849369 intron CG32432 - chr3L_9_20845001 chr3L_20845001 RAL-513 1673 chr3L 20858053 20858103 chr3L 20858171 20858202 14 116 2.0 0.0 1.0 7.0 149 chr3L 20858053 intron CG32432 - chr3L 20858128 intron CG32432 - chr3L 20858202 intron CG32432 - chr3L_14_20855001 chr3L_20855001 RAL-513 1674 chr3L 21014902 21014943 chr3L 21023403 21023417 Tirant 9 8491 3.0 4.5 3.8 1.9 8515 chr3L 21014902 intron skd - chr3L 21019160 intron skd - chr3L 21023417 intron skd - chr3L_9_21015001 chr3L_21015001 RAL-513 1675 chr3L 21057125 21057161 chr3L 21057360 21057397 10 236 3.0 5.0 4.0 2.0 272 chr3L 21057125 intron siz + chr3L 21057261 intron siz + chr3L 21057397 intron siz + chr3L_10_21055001 chr3L_21055001 RAL-513 1676 chr3L 21067940 21067981 chr3L 21068031 21068077 13 95 3.5 2.5 3.0 3.2 137 chr3L 21067940 intron siz + chr3L 21068008 intron siz + chr3L 21068077 intron siz + chr3L_13_21065001 chr3L_21065001 RAL-513 1677 chr3L 21082211 21082240 chr3L 21082290 21082338 8 92 1.0 3.0 2.0 2.7 127 chr3L 21082211 intron ko - chr3L 21082274 intron ko - chr3L 21082338 intron ko - chr3L_8_21080001 chr3L_21080001 RAL-513 1678 chr3L 21087910 21087935 chr3L 21088097 21088105 4 182 4.0 5.0 4.5 0.7 195 chr3L 21087910 intron ko - chr3L 21088008 intron ko - chr3L 21088105 intron ko - chr3L_4_21085001 chr3L_21085001 RAL-513 1679 chr3L 21151851 21151896 chr3L 21156955 21157000 flea 10 5104 3.5 3.5 3.5 2.2 5149 chr3L 21151851 intron Ac78C - chr3L 21154426 intron Ac78C - chr3L 21157000 intron Ac78C - chr3L_10_21150001 chr3L_21150001 RAL-513 1680 chr3L 21243741 21243752 chr3L 21251320 21251330 412 4 7579 5.0 5.5 5.2 0.6 7589 chr3L 21243741 intron Eip78C + chr3L 21247536 intron Eip78C + chr3L 21251330 intron Eip78C + chr3L_4_21245001 chr3L_21245001 RAL-513 1681 chr3L 21301714 21301764 chr3L 21301820 21301829 17 96 6.5 3.5 5.0 2.8 115 chr3L 21301714 5` UTR CR45432 + chr3L 21301772 5` UTR CR45432 + chr3L 21301829 5` UTR,3` UTR CR45432 +,CG11309 - chr3L_17_21300001 chr3L_21300001 RAL-513 1682 chr3L 21306133 21306167 chr3L 21315312 21315344 roo 8 9176 2.0 4.5 3.2 1.9 9211 chr3L 21306133 3` UTR CG7632 + chr3L 21310738 intron Pc - chr3L 21315344 3` UTR Pc - chr3L_8_21310001 chr3L_21310001 RAL-513 1683 chr3L 21319512 21319556 chr3L 21319617 21319650 10 105 7.0 4.0 5.5 1.5 138 chr3L 21319512 5` UTR Rab26 + chr3L 21319581 5` UTR Rab26 + chr3L 21319650 5` UTR Rab26 + chr3L_10_21315001 chr3L_21315001 RAL-513 1684 chr3L 21361732 21361751 chr3L 21362700 21362724 G2 8 973 4.5 6.5 5.5 1.2 992 chr3L 21361732 intergenic not near genes chr3L 21362228 intergenic not near genes chr3L 21362724 intergenic not near genes chr3L_8_21360001 chr3L_21360001 RAL-513 1685 chr3L 21362835 21362886 chr3L 21362938 21362990 16 99 7.0 5.5 6.2 2.2 155 chr3L 21362835 intergenic not near genes chr3L 21362912 intergenic not near genes chr3L 21362990 intergenic not near genes chr3L_16_21360001 chr3L_21360001 RAL-513 1686 chr3L 21395124 21395138 chr3L 21395232 21395233 10 106 9.0 6.0 7.5 1.2 109 chr3L 21395124 intron rgn + chr3L 21395178 intron rgn + chr3L 21395233 intron rgn + chr3L_10_21395001 chr3L_21395001 RAL-513 1687 chr3L 21395144 21395179 chr3L 21395230 21395256 11 92 6.0 6.0 6.0 1.6 112 chr3L 21395144 intron rgn + chr3L 21395200 intron rgn + chr3L 21395256 intron rgn + chr3L_11_21395001 chr3L_21395001 RAL-513 1688 chr3L 21406979 21407028 chr3L 21407078 21407099 10 93 5.0 4.5 4.8 1.7 120 chr3L 21406979 intron rgn + chr3L 21407039 intron rgn + chr3L 21407099 intron rgn + chr3L_10_21405001 chr3L_21405001 RAL-513 1689 chr3L 21412740 21412779 chr3L 21412821 21412830 10 83 4.5 5.5 5.0 1.7 90 chr3L 21412740 intron rgn + chr3L 21412785 intron rgn + chr3L 21412830 intron rgn + chr3L_10_21410001 chr3L_21410001 RAL-513 1690 chr3L 21770028 21770039 chr3L 21770129 21770146 5 98 4.5 5.0 4.8 0.9 118 chr3L 21770028 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L 21770087 5` UTR,intron,intron Syn1 -,CG42689 +,CG7370 + chr3L 21770146 5` UTR,intron,intron Syn1 -,CG42689 +,CG7370 + chr3L_5_21770001 chr3L_21770001 RAL-513 1691 chr3L 21770993 21771039 chr3L 21771281 21771299 19 283 4.0 3.0 3.5 4.2 306 chr3L 21770993 intron,3` UTR CG42689 +,CG7370 + chr3L 21771146 intron,3` UTR CG42689 +,CG7370 + chr3L 21771299 intron,3` UTR CG42689 +,CG7370 + chr3L_19_21770001 chr3L_21770001 RAL-513 1692 chr3L 21776665 21776703 chr3L 21776771 21776809 7 106 0.5 1.0 0.8 3.9 144 chr3L 21776665 intron,intron CG42689 +,CG42552 + chr3L 21776737 intron,intron CG42689 +,CG42552 + chr3L 21776809 intron,intron CG42689 +,CG42552 + chr3L_7_21775001 chr3L_21775001 RAL-513 1693 chr3L 22099661 22099706 chr3L 22105863 22105887 3S18 8 6197 3.0 4.5 3.8 1.7 6226 chr3L 22099661 intergenic not near genes chr3L 22102774 intergenic not near genes chr3L 22105887 intergenic not near genes chr3L_8_22100001 chr3L_22100001 RAL-513 1694 chr3L 22122149 22122198 chr3L 22122511 22122547 12 353 5.0 4.5 4.8 2.1 398 chr3L 22122149 5` UTR CR45236 + chr3L 22122348 intergenic CR45236 +,CR45235 + chr3L 22122547 intergenic CR45235 +,CR45236 + chr3L_12_22120001 chr3L_22120001 RAL-513 1695 chr3L 22130493 22130523 chr3L 22130658 22130689 6 164 0.5 2.5 1.5 2.4 196 chr3L 22130493 intergenic not near genes chr3L 22130591 intergenic not near genes chr3L 22130689 intergenic not near genes chr3L_6_22130001 chr3L_22130001 RAL-513 1696 chr3L 22137503 22137548 chr3L 22137599 22137627 12 95 2.0 4.0 3.0 3.0 124 chr3L 22137503 intron olf413 + chr3L 22137565 intron olf413 + chr3L 22137627 intron olf413 + chr3L_12_22135001 chr3L_22135001 RAL-513 1697 chr3L 22170045 22170059 chr3L 22170162 22170187 4 118 2.5 3.5 3.0 1.0 142 chr3L 22170045 intron olf413 + chr3L 22170116 intron olf413 + chr3L 22170187 intron olf413 + chr3L_4_22170001 chr3L_22170001 RAL-513 1698 chr3L 22241273 22241323 chr3L 22241375 22241379 12 88 5.5 3.0 4.2 2.3 106 chr3L 22241273 intron olf413 + chr3L 22241326 intron olf413 + chr3L 22241379 intron olf413 + chr3L_12_22240001 chr3L_22240001 RAL-513 1699 chr3L 22250976 22251027 chr3L 22251091 22251092 6 105 7.0 5.0 6.0 0.9 116 chr3L 22250976 intergenic not near genes chr3L 22251034 intergenic not near genes chr3L 22251092 intergenic not near genes chr3L_6_22250001 chr3L_22250001 RAL-513 1700 chr3L 22328059 22328092 chr3L 22328160 22328210 8 103 0.0 5.5 2.8 2.1 151 chr3L 22328059 intron Ten-m - chr3L 22328134 intron Ten-m - chr3L 22328210 intron Ten-m - chr3L_8_22325001 chr3L_22325001 RAL-513 1701 chr3L 22333414 22333464 chr3L 22333572 22333606 10 148 3.0 6.0 4.5 1.8 192 chr3L 22333414 intron Ten-m - chr3L 22333510 intron Ten-m - chr3L 22333606 intron Ten-m - chr3L_10_22330001 chr3L_22330001 RAL-513 1702 chr3L 22361919 22361963 chr3L 22362016 22362060 5 96 4.5 3.5 4.0 1.0 141 chr3L 22361919 intron Ten-m - chr3L 22361990 intron Ten-m - chr3L 22362060 intron Ten-m - chr3L_5_22360001 chr3L_22360001 RAL-513 1703 chr3L 22382127 22382170 chr3L 22382233 22382276 17 95 4.0 5.0 4.5 3.1 149 chr3L 22382127 intron Ten-m - chr3L 22382202 intron Ten-m - chr3L 22382276 intron Ten-m - chr3L_17_22380001 chr3L_22380001 RAL-513 1704 chr3L 22413869 22413900 chr3L 22413964 22413982 8 93 2.5 3.5 3.0 2.0 113 chr3L 22413869 intergenic not near genes chr3L 22413926 intergenic not near genes chr3L 22413982 intergenic not near genes chr3L_8_22410001 chr3L_22410001 RAL-513 1705 chr3L 22507121 22507138 chr3L 22507217 22507242 4 97 3.0 6.5 4.8 0.7 121 chr3L 22507121 intergenic not near genes chr3L 22507182 intergenic not near genes chr3L 22507242 intergenic not near genes chr3L_4_22505001 chr3L_22505001 RAL-513 1706 chr3L 22522680 22522729 chr3L 22522776 22522824 8 89 1.5 1.5 1.5 3.2 144 chr3L 22522680 intergenic not near genes chr3L 22522752 intergenic not near genes chr3L 22522824 intergenic not near genes chr3L_8_22520001 chr3L_22520001 RAL-513 1707 chr3L 22536676 22536681 chr3L 22536771 22536780 4 97 12.5 9.5 11.0 0.3 104 chr3L 22536676 intergenic not near genes chr3L 22536728 intergenic not near genes chr3L 22536780 intergenic not near genes chr3L_4_22535001 chr3L_22535001 RAL-513 1708 chr3L 22536682 22536713 chr3L 22536769 22536815 13 94 5.5 9.5 7.5 1.5 133 chr3L 22536682 intergenic not near genes chr3L 22536748 intergenic not near genes chr3L 22536815 intergenic not near genes chr3L_13_22535001 chr3L_22535001 RAL-513 1709 chr3L 22542044 22542076 chr3L 22542155 22542187 9 111 3.5 5.0 4.2 1.7 143 chr3L 22542044 intergenic not near genes chr3L 22542116 intergenic not near genes chr3L 22542187 intergenic not near genes chr3L_9_22540001 chr3L_22540001 RAL-513 1710 chr3L 22545046 22545072 chr3L 22545233 22545247 7 182 4.0 7.0 5.5 1.1 201 chr3L 22545046 intergenic not near genes chr3L 22545146 intergenic not near genes chr3L 22545247 intergenic not near genes chr3L_7_22545001 chr3L_22545001 RAL-513 1711 chr3L 22545074 22545087 chr3L 22545229 22545274 4 179 2.0 6.0 4.0 0.8 200 chr3L 22545074 intergenic not near genes chr3L 22545174 intergenic not near genes chr3L 22545274 intergenic not near genes chr3L_4_22545001 chr3L_22545001 RAL-513 1712 chr3L 22555756 22555803 chr3L 22563246 22563263 blood 11 7480 3.5 4.0 3.8 2.3 7507 chr3L 22555756 intergenic not near genes chr3L 22559510 intergenic not near genes chr3L 22563263 intergenic not near genes chr3L_11_22555001 chr3L_22555001 RAL-513 1713 chr3L 22577613 22577650 chr3L 22582402 22582414 Doc 11 4796 2.0 3.5 2.8 2.9 4801 chr3L 22577613 intergenic not near genes chr3L 22580014 intergenic not near genes chr3L 22582414 3` UTR CG14459 - chr3L_11_22580001 chr3L_22580001 RAL-513 1714 chr3L 22595995 22596046 chr3L 22596101 22596152 18 97 2.5 5.0 3.8 3.8 157 chr3L 22595995 intron CG14459 - chr3L 22596074 intron CG14459 - chr3L 22596152 intron CG14459 - chr3L_18_22595001 chr3L_22595001 RAL-513 1715 chr3L 22617178 22617200 chr3L 22624648 22624649 blood 5 7467 3.5 3.0 3.2 1.2 7471 chr3L 22617178 intron CG14459 - chr3L 22620914 intron CG14459 - chr3L 22624649 intron CG14459 - chr3L_5_22620001 chr3L_22620001 RAL-513 1716 chr3L 22644822 22644845 chr3L 22645068 22645093 7 247 6.5 4.5 5.5 1.1 271 chr3L 22644822 intergenic CR45381 + chr3L 22644958 intergenic CR45381 + chr3L 22645093 intergenic not near genes chr3L_7_22640001 chr3L_22640001 RAL-513 1717 chr3L 22644846 22644864 chr3L 22645060 22645079 7 238 4.0 3.5 3.8 1.5 233 chr3L 22644846 intergenic CR45381 + chr3L 22644962 intergenic CR45381 + chr3L 22645079 intergenic not near genes chr3L_7_22640001 chr3L_22640001 RAL-513 1718 chr3L 22682202 22682248 chr3L 22682321 22682368 21 112 2.5 6.5 4.5 3.8 166 chr3L 22682202 intergenic not near genes chr3L 22682285 intergenic not near genes chr3L 22682368 intergenic not near genes chr3L_21_22680001 chr3L_22680001 RAL-513 1719 chr3L 22761370 22761413 chr3L 22766818 22766848 Ivk 14 5447 4.5 5.5 5.0 2.3 5478 chr3L 22761370 intron SPoCk + chr3L 22764109 intron SPoCk + chr3L 22766848 intron SPoCk + chr3L_14_22760001 chr3L_22760001 RAL-513 1720 chr3L 22771798 22771853 chr3L 22771901 22771956 17 101 4.0 3.5 3.8 3.5 158 chr3L 22771798 intron SPoCk + chr3L 22771877 intron SPoCk + chr3L 22771956 intron SPoCk + chr3L_17_22770001 chr3L_22770001 RAL-513 1721 chr3L 22774666 22774713 chr3L 22774761 22774792 13 88 3.5 1.0 2.2 4.1 126 chr3L 22774666 intron SPoCk + chr3L 22774729 intron SPoCk + chr3L 22774792 intron SPoCk + chr3L_13_22770001 chr3L_22770001 RAL-513 1722 chr3L 22835429 22835477 chr3L 22835538 22835573 10 108 2.0 7.0 4.5 1.8 144 chr3L 22835429 intergenic jim - chr3L 22835501 intergenic jim - chr3L 22835573 intergenic jim - chr3L_10_22835001 chr3L_22835001 RAL-513 1723 chr3L 22865971 22865996 chr3L 22867124 22867149 Doc 10 1152 5.5 8.0 6.8 1.3 1178 chr3L 22865971 intron CG33170 + chr3L 22866560 intron CG33170 + chr3L 22867149 intron CG33170 + chr3L_10_22865001 chr3L_22865001 RAL-513 1724 chr3L 22865998 22866012 chr3L 22867120 22867151 Doc 6 1143 3.5 7.0 5.2 1.0 1153 chr3L 22865998 intron CG33170 + chr3L 22866574 intron CG33170 + chr3L 22867151 intron CG33170 + chr3L_6_22865001 chr3L_22865001 RAL-513 1725 chr3L 22908066 22908066 chr3L 24821493 24821494 5 1913428 15.5 14.0 14.8 0.3 1913428 chr3L 22908066 intergenic not near genes chr3L 23864780 intron CG40470 - chr3L 24821494 intergenic not near genes chr3L_5_23860001 chr3L_23860001 RAL-513 1726 chr3L 22974929 22974941 chr3L 22975431 22975443 4 502 4.0 11.5 7.8 0.5 514 chr3L 22974929 intergenic not near genes chr3L 22975186 intergenic not near genes chr3L 22975443 intergenic not near genes chr3L_4_22975001 chr3L_22975001 RAL-513 1727 chr3L 22989845 22989862 chr3L 22996837 22996856 297 4 6994 5.5 1.0 3.2 1.0 7011 chr3L 22989845 intergenic not near genes chr3L 22993350 intergenic not near genes chr3L 22996856 intergenic not near genes chr3L_4_22990001 chr3L_22990001 RAL-513 1728 chr3L 22989867 22989888 chr3L 22996835 22996882 297 9 6988 3.5 1.0 2.2 2.8 7015 chr3L 22989867 intergenic not near genes chr3L 22993374 intergenic not near genes chr3L 22996882 intergenic not near genes chr3L_9_22990001 chr3L_22990001 RAL-513 1729 chr3L 23218021 23218071 chr3L 23218520 23218561 19 495 2.5 2.0 2.2 5.9 540 chr3L 23218021 intron nAChRalpha4 + chr3L 23218291 intron nAChRalpha4 + chr3L 23218561 intron nAChRalpha4 + chr3L_19_23215001 chr3L_23215001 RAL-513 1730 chr3L 23246403 23246418 chr3L 23246487 23246498 5 92 3.5 6.0 4.8 0.9 95 chr3L 23246403 intron nAChRalpha4 + chr3L 23246450 intron nAChRalpha4 + chr3L 23246498 intron nAChRalpha4 + chr3L_5_23245001 chr3L_23245001 RAL-513 1731 chr3L 23468009 23468026 chr3L 23468157 23468173 5 148 31.0 22.0 26.5 0.2 164 chr3L 23468009 intergenic not near genes chr3L 23468091 intergenic not near genes chr3L 23468173 intergenic not near genes chr3L_5_23465001 chr3L_23465001 RAL-513 1732 chr3L 24008371 24008417 chr3L 24008620 24008660 17 245 7.5 4.5 6.0 2.4 289 chr3L 24008371 intergenic not near genes chr3L 24008516 intergenic not near genes chr3L 24008660 intergenic not near genes chr3L_17_24005001 chr3L_24005001 RAL-513 1733 chr3L 24012422 24012438 chr3L 24020757 24020780 roo 5 8342 1.0 4.0 2.5 1.4 8358 chr3L 24012422 intergenic not near genes chr3L 24016601 intergenic not near genes chr3L 24020780 intergenic not near genes chr3L_5_24015001 chr3L_24015001 RAL-513 1734 chr3L 24022518 24022552 chr3L 24022681 24022687 11 158 3.0 3.5 3.2 2.6 169 chr3L 24022518 intergenic not near genes chr3L 24022602 intergenic not near genes chr3L 24022687 intergenic not near genes chr3L_11_24020001 chr3L_24020001 RAL-513 1735 chr3L 24168771 24168805 chr3L 24176117 24176121 ZAM 5 7334 7.0 2.0 4.5 0.9 7350 chr3L 24168771 intron Snap25 + chr3L 24172446 intron Snap25 + chr3L 24176121 intron Snap25 + chr3L_5_24170001 chr3L_24170001 RAL-513 1736 chr3L 24791880 24791916 chr3L 24796679 24796701 Doc 4 4796 2.5 3.5 3.0 1.0 4821 chr3L 24791880 intergenic not near genes chr3L 24794290 intergenic not near genes chr3L 24796701 intergenic not near genes chr3L_4_24790001 chr3L_24790001 RAL-513 1737 chr3L 26290095 26290128 chr3L 26290269 26290307 8 165 1.0 2.0 1.5 3.2 212 chr3L 26290095 intergenic not near genes chr3L 26290201 intergenic not near genes chr3L 26290307 intergenic not near genes chr3L_8_26290001 chr3L_26290001 RAL-513 1738 chr3L 27390682 27390711 chr3L 27390781 27390810 4 99 26.5 25.0 25.8 0.1 128 chr3L 27390682 intron Dbp80 + chr3L 27390746 intron Dbp80 + chr3L 27390810 intron Dbp80 + chr3L_4_27390001 chr3L_27390001 RAL-513 1739 chr3R 1521175 1521179 chr3R 1521245 1521287 4 93 12.5 10.0 11.2 0.3 112 chr3R 1521175 intergenic not near genes chr3R 1521231 intergenic not near genes chr3R 1521287 intergenic not near genes chr3R_4_1520001 chr3R_1520001 RAL-513 1740 chr3R 1511854 1511859 chr3R 2516753 2516778 297 4 1004906 14.5 20.5 17.5 0.2 1004924 chr3R 1511854 intergenic not near genes chr3R 2014316 intergenic not near genes chr3R 2516778 intergenic not near genes chr3R_4_2010001 chr3R_2010001 RAL-513 1741 chr3R 2534145 2534162 chr3R 2541709 2541740 6 7580 14.0 20.0 17.0 0.3 7595 chr3R 2534145 intergenic not near genes chr3R 2537942 intergenic not near genes chr3R 2541740 intergenic not near genes chr3R_6_2535001 chr3R_2535001 RAL-513 1742 chr3R 2556883 2556917 chr3R 2557596 2557643 5 721 23.0 16.0 19.5 0.2 760 chr3R 2556883 intron CG41056 - chr3R 2557263 intron CG41056 - chr3R 2557643 intron CG41056 - chr3R_5_2555001 chr3R_2555001 RAL-513 1743 chr3R 3178700 3178709 chr3R 3595184 3595213 4 416494 11.0 14.0 12.5 0.3 416513 chr3R 3178700 intron CG42617 - chr3R 3386956 intergenic not near genes chr3R 3595213 intergenic not near genes chr3R_4_3385001 chr3R_3385001 RAL-513 1744 chr3R 4105037 4105066 chr3R 4110247 4110290 copia 5 5220 3.0 3.5 3.2 1.2 5253 chr3R 4105037 intergenic not near genes chr3R 4107664 intergenic not near genes chr3R 4110290 intergenic not near genes chr3R_5_4105001 chr3R_4105001 RAL-513 1745 chr3R 4132891 4132922 chr3R 4133065 4133096 8 174 2.5 3.0 2.8 2.1 205 chr3R 4132891 5` UTR Gfat1 + chr3R 4132994 intron Gfat1 + chr3R 4133096 intron Gfat1 + chr3R_8_4130001 chr3R_4130001 RAL-513 1746 chr3R 4206054 4206099 chr3R 4211649 4211676 mdg3 5 5591 3.0 1.0 2.0 1.7 5622 chr3R 4206054 intron CG14636 - chr3R 4208865 intron CG14636 - chr3R 4211676 intron CG14636 - chr3R_5_4205001 chr3R_4205001 RAL-513 1747 chr3R 4366759 4366788 chr3R 4375150 4375191 roo 7 8398 3.0 5.0 4.0 1.4 8432 chr3R 4366759 3` UTR CG1090 + chr3R 4370975 intergenic not near genes chr3R 4375191 5` UTR CR44922 + chr3R_7_4370001 chr3R_4370001 RAL-513 1748 chr3R 4408421 4408440 chr3R 4412723 4412737 Juan 8 4313 5.0 4.5 4.8 1.4 4316 chr3R 4408421 intron CG32944 - chr3R 4410579 intron CG32944 - chr3R 4412737 intron CG32944 - chr3R_8_4410001 chr3R_4410001 RAL-513 1749 chr3R 4609532 4609578 chr3R 4610711 4610762 1360 13 1179 9.5 6.0 7.8 1.5 1230 chr3R 4609532 intergenic not near genes chr3R 4610147 intergenic not near genes chr3R 4610762 intergenic not near genes chr3R_13_4610001 chr3R_4610001 RAL-513 1750 chr3R 4722322 4722374 chr3R 4722478 4722530 24 153 3.5 4.0 3.8 5.0 208 chr3R 4722322 intron Nep2 - chr3R 4722426 intron Nep2 - chr3R 4722530 intron Nep2 - chr3R_24_4720001 chr3R_4720001 RAL-513 1751 chr3R 4739096 4739145 chr3R 4739193 4739242 20 94 5.0 5.0 5.0 3.3 146 chr3R 4739096 intron tacc - chr3R 4739169 intron tacc - chr3R 4739242 intron tacc - chr3R_20_4735001 chr3R_4735001 RAL-513 1752 chr3R 4769139 4769190 chr3R 4769236 4769287 17 93 5.5 4.5 5.0 2.8 148 chr3R 4769139 intron,intron atms +,CG44098 - chr3R 4769213 intron,intron atms +,CG44098 - chr3R 4769287 intron,intron atms +,CG44098 - chr3R_17_4765001 chr3R_4765001 RAL-513 1753 chr3R 4887461 4887511 chr3R 4894857 4894883 rover 9 7389 3.0 4.0 3.5 2.0 7422 chr3R 4887461 intergenic not near genes chr3R 4891172 intergenic not near genes chr3R 4894883 intergenic not near genes chr3R_9_4890001 chr3R_4890001 RAL-513 1754 chr3R 4975924 4975961 chr3R 4976044 4976082 6 120 4.5 4.5 4.5 1.1 158 chr3R 4975924 intergenic not near genes chr3R 4976003 intergenic not near genes chr3R 4976082 intergenic not near genes chr3R_6_4975001 chr3R_4975001 RAL-513 1755 chr3R 5045845 5045878 chr3R 5052947 5053000 HMS-Beagle 7 7119 5.0 4.0 4.5 1.3 7155 chr3R 5045845 intron CR43635 - chr3R 5049422 intergenic not near genes chr3R 5053000 intergenic CR45588 - chr3R_7_5045001 chr3R_5045001 RAL-513 1756 chr3R 5067972 5068014 chr3R 5073500 5073533 mdg3 14 5533 2.0 1.5 1.8 5.0 5561 chr3R 5067972 intergenic not near genes chr3R 5070752 intergenic not near genes chr3R 5073533 intergenic not near genes chr3R_14_5070001 chr3R_5070001 RAL-513 1757 chr3R 5278075 5278110 chr3R 5278173 5278193 11 93 5.0 4.0 4.5 2.0 118 chr3R 5278075 intron mtd - chr3R 5278134 intron mtd - chr3R 5278193 intron mtd - chr3R_11_5275001 chr3R_5275001 RAL-513 1758 chr3R 5306135 5306161 chr3R 5306216 5306264 7 95 2.5 6.0 4.2 1.3 129 chr3R 5306135 intron mtd - chr3R 5306200 intron mtd - chr3R 5306264 intron mtd - chr3R_7_5305001 chr3R_5305001 RAL-513 1759 chr3R 5338382 5338417 chr3R 5343578 5343612 Rt1c 8 5193 2.0 8.5 5.2 1.3 5230 chr3R 5338382 intron mtd - chr3R 5340997 intron mtd - chr3R 5343612 intron mtd - chr3R_8_5340001 chr3R_5340001 RAL-513 1760 chr3R 5422827 5422829 chr3R 5423132 5423167 4 329 0.5 2.0 1.2 1.8 340 chr3R 5422827 intron CG14669 + chr3R 5422997 intron CG14669 + chr3R 5423167 intron CG14669 + chr3R_4_5420001 chr3R_5420001 RAL-513 1761 chr3R 5428560 5428574 chr3R 5428659 5428670 6 98 7.5 5.0 6.2 0.8 110 chr3R 5428560 intron CG14669 + chr3R 5428615 intron CG14669 + chr3R 5428670 intron CG14669 + chr3R_6_5425001 chr3R_5425001 RAL-513 1762 chr3R 5428575 5428606 chr3R 5428655 5428685 10 88 3.0 4.5 3.8 2.1 110 chr3R 5428575 intron CG14669 + chr3R 5428630 intron CG14669 + chr3R 5428685 intron CG14669 + chr3R_10_5425001 chr3R_5425001 RAL-513 1763 chr3R 5445952 5445979 chr3R 5452429 5452453 Burdock 4 6478 6.0 8.0 7.0 0.5 6501 chr3R 5445952 intron CG14669 + chr3R 5449202 intron CG14669 + chr3R 5452453 intron CG14669 + chr3R_4_5445001 chr3R_5445001 RAL-513 1764 chr3R 5506819 5506866 chr3R 5506971 5507017 9 144 4.5 1.5 3.0 2.2 198 chr3R 5506819 intergenic not near genes chr3R 5506918 intergenic not near genes chr3R 5507017 intergenic not near genes chr3R_9_5505001 chr3R_5505001 RAL-513 1765 chr3R 5627128 5627176 chr3R 5627559 5627590 11 423 4.5 5.5 5.0 1.8 462 chr3R 5627128 intergenic not near genes chr3R 5627359 intergenic CG31551 + chr3R 5627590 intergenic CG31551 + chr3R_11_5625001 chr3R_5625001 RAL-513 1766 chr3R 5746004 5746046 chr3R 5746265 5746307 pogo 13 256 2.0 8.0 5.0 2.2 303 chr3R 5746004 3` UTR Madm + chr3R 5746156 3` UTR Madm + chr3R 5746307 3` UTR Madm + chr3R_13_5745001 chr3R_5745001 RAL-513 1767 chr3R 5747006 5747042 chr3R 5753202 5753234 diver 8 6205 5.0 2.5 3.8 1.7 6228 chr3R 5747006 intergenic Madm + chr3R 5750120 intergenic not near genes chr3R 5753234 intergenic CG2091 - chr3R_8_5750001 chr3R_5750001 RAL-513 1768 chr3R 5763020 5763058 chr3R 5763130 5763169 13 103 4.0 5.0 4.5 2.4 149 chr3R 5763020 intron CG2082 - chr3R 5763094 intron CG2082 - chr3R 5763169 intron CG2082 - chr3R_13_5760001 chr3R_5760001 RAL-513 1769 chr3R 5772366 5772396 chr3R 5772544 5772573 7 177 3.0 3.0 3.0 1.8 207 chr3R 5772366 intron CG2082 - chr3R 5772470 intron CG2082 - chr3R 5772573 intron CG2082 - chr3R_7_5770001 chr3R_5770001 RAL-513 1770 chr3R 5809101 5809118 chr3R 5809356 5809359 pogo 7 255 6.0 4.5 5.2 1.1 258 chr3R 5809101 3` UTR CG11000 + chr3R 5809230 3` UTR CG11000 + chr3R 5809359 3` UTR CG11000 + chr3R_7_5805001 chr3R_5805001 RAL-513 1771 chr3R 5809120 5809139 chr3R 5809353 5809400 pogo 7 250 2.5 4.0 3.2 1.7 280 chr3R 5809120 3` UTR CG11000 + chr3R 5809260 3` UTR CG11000 + chr3R 5809400 3` UTR CG11000 + chr3R_7_5805001 chr3R_5805001 RAL-513 1772 chr3R 5822388 5822403 chr3R 5823556 5823588 1360 7 1182 3.5 7.0 5.2 1.1 1200 chr3R 5822388 3` UTR CG2023 - chr3R 5822988 3` UTR CG2023 - chr3R 5823588 3` UTR CG2023 - chr3R_7_5820001 chr3R_5820001 RAL-513 1773 chr3R 5882664 5882696 chr3R 5882824 5882872 12 173 7.0 8.0 7.5 1.4 208 chr3R 5882664 intron CG34113 - chr3R 5882768 intron CG34113 - chr3R 5882872 intron CG34113 - chr3R_12_5880001 chr3R_5880001 RAL-513 1774 chr3R 5895951 5895973 chr3R 5896185 5896201 7 231 1.5 3.5 2.5 2.0 250 chr3R 5895951 intron CG34113 - chr3R 5896076 intron CG34113 - chr3R 5896201 intron CG34113 - chr3R_7_5895001 chr3R_5895001 RAL-513 1775 chr3R 5896959 5896999 chr3R 5897330 5897374 12 370 3.0 5.5 4.2 2.3 415 chr3R 5896959 intron CG34113 - chr3R 5897166 intron CG34113 - chr3R 5897374 intron CG34113 - chr3R_12_5895001 chr3R_5895001 RAL-513 1776 chr3R 5927553 5927588 chr3R 5927799 5927835 pogo 9 252 3.5 5.0 4.2 1.7 282 chr3R 5927553 intron CG34113 - chr3R 5927694 intron CG34113 - chr3R 5927835 intron CG34113 - chr3R_9_5925001 chr3R_5925001 RAL-513 1777 chr3R 6015956 6015992 chr3R 6024443 6024490 Tirant 4 8490 3.5 3.0 3.2 1.0 8534 chr3R 6015956 intergenic not near genes chr3R 6020223 intergenic not near genes chr3R 6024490 intergenic not near genes chr3R_4_6020001 chr3R_6020001 RAL-513 1778 chr3R 6048439 6048458 chr3R 6048538 6048543 7 98 10.5 6.0 8.2 0.8 104 chr3R 6048439 intergenic not near genes chr3R 6048491 intergenic not near genes chr3R 6048543 intergenic not near genes chr3R_7_6045001 chr3R_6045001 RAL-513 1779 chr3R 6121164 6121186 chr3R 6121371 6121388 BS 5 225 0.5 1.5 1.0 2.5 224 chr3R 6121164 intergenic not near genes chr3R 6121276 intergenic not near genes chr3R 6121388 intergenic not near genes chr3R_5_6120001 chr3R_6120001 RAL-513 1780 chr3R 6158514 6158534 chr3R 6167094 6167109 Tirant 5 8588 7.5 4.5 6.0 0.7 8595 chr3R 6158514 intergenic not near genes chr3R 6162812 intergenic not near genes chr3R 6167109 intergenic CG1077 + chr3R_5_6160001 chr3R_6160001 RAL-513 1781 chr3R 6175153 6175202 chr3R 6182445 6182489 HMS-Beagle2 15 7287 3.5 3.0 3.2 3.6 7336 chr3R 6175153 intergenic Osi1 + chr3R 6178821 intron CR45194 + chr3R 6182489 intergenic CR45194 + chr3R_15_6175001 chr3R_6175001 RAL-513 1782 chr3R 6206267 6206315 chr3R 6206504 6206552 BS 9 229 4.5 4.0 4.2 1.7 285 chr3R 6206267 exon Osi24 + chr3R 6206410 intron Osi24 + chr3R 6206552 intron Osi24 + chr3R_9_6205001 chr3R_6205001 RAL-513 1783 chr3R 6428790 6428843 chr3R 6428911 6428965 17 118 3.0 2.0 2.5 4.9 175 chr3R 6428790 intron gpp + chr3R 6428878 intron gpp + chr3R 6428965 intron gpp + chr3R_17_6425001 chr3R_6425001 RAL-513 1784 chr3R 6444795 6444844 chr3R 6444892 6444932 8 94 4.5 2.0 3.2 1.9 137 chr3R 6444795 intron gpp + chr3R 6444864 intron gpp + chr3R 6444932 intron gpp + chr3R_8_6440001 chr3R_6440001 RAL-513 1785 chr3R 6461573 6461611 chr3R 6461658 6461711 16 98 4.0 4.0 4.0 3.2 138 chr3R 6461573 intergenic not near genes chr3R 6461642 intergenic not near genes chr3R 6461711 intergenic not near genes chr3R_16_6460001 chr3R_6460001 RAL-513 1786 chr3R 6479916 6479968 chr3R 6480012 6480064 5 93 1.0 0.5 0.8 2.8 148 chr3R 6479916 intron CG15186 + chr3R 6479990 intron CG15186 + chr3R 6480064 intron CG15186 + chr3R_5_6475001 chr3R_6475001 RAL-513 1787 chr3R 6510016 6510035 chr3R 6515115 6515134 jockey 5 5100 5.0 4.0 4.5 0.9 5118 chr3R 6510016 intergenic not near genes chr3R 6512575 intergenic not near genes chr3R 6515134 intergenic not near genes chr3R_5_6510001 chr3R_6510001 RAL-513 1788 chr3R 6523304 6523325 chr3R 6523699 6523717 7 394 4.0 4.5 4.2 1.3 413 chr3R 6523304 intergenic not near genes chr3R 6523510 intergenic not near genes chr3R 6523717 intergenic not near genes chr3R_7_6520001 chr3R_6520001 RAL-513 1789 chr3R 6523326 6523335 chr3R 6523692 6523731 4 383 3.5 3.5 3.5 0.9 405 chr3R 6523326 intergenic not near genes chr3R 6523528 intergenic not near genes chr3R 6523731 intergenic not near genes chr3R_4_6520001 chr3R_6520001 RAL-513 1790 chr3R 6532089 6532138 chr3R 6532477 6532511 11 384 2.5 2.5 2.5 3.1 422 chr3R 6532089 intron dpr11 - chr3R 6532300 intron dpr11 - chr3R 6532511 intron dpr11 - chr3R_11_6530001 chr3R_6530001 RAL-513 1791 chr3R 6550325 6550338 chr3R 6550404 6550436 8 92 3.5 5.0 4.2 1.5 111 chr3R 6550325 intron dpr11 - chr3R 6550380 intron dpr11 - chr3R 6550436 intron dpr11 - chr3R_8_6550001 chr3R_6550001 RAL-513 1792 chr3R 6551106 6551133 chr3R 6551220 6551247 9 112 3.5 8.5 6.0 1.3 141 chr3R 6551106 intron dpr11 - chr3R 6551176 intron dpr11 - chr3R 6551247 intron dpr11 - chr3R_9_6550001 chr3R_6550001 RAL-513 1793 chr3R 6624240 6624267 chr3R 6624341 6624369 4 97 4.0 1.0 2.5 1.1 129 chr3R 6624240 intergenic not near genes chr3R 6624304 intergenic not near genes chr3R 6624369 intergenic not near genes chr3R_4_6620001 chr3R_6620001 RAL-513 1794 chr3R 6639891 6639926 chr3R 6639988 6640016 10 97 4.0 0.0 2.0 3.3 125 chr3R 6639891 intergenic not near genes chr3R 6639954 intergenic not near genes chr3R 6640016 intergenic not near genes chr3R_10_6635001 chr3R_6635001 RAL-513 1795 chr3R 6698000 6698035 chr3R 6698098 6698134 6 97 3.0 3.0 3.0 1.5 134 chr3R 6698000 intergenic not near genes chr3R 6698067 intergenic not near genes chr3R 6698134 intergenic not near genes chr3R_6_6695001 chr3R_6695001 RAL-513 1796 chr3R 6737477 6737524 chr3R 6739284 6739303 Doc 4 1800 2.0 1.0 1.5 1.6 1826 chr3R 6737477 intron pb - chr3R 6738390 intron pb - chr3R 6739303 intron pb - chr3R_4_6735001 chr3R_6735001 RAL-513 1797 chr3R 6743138 6743167 chr3R 6743241 6743270 7 103 3.5 1.0 2.2 2.2 132 chr3R 6743138 3` UTR zen2 - chr3R 6743204 3` UTR zen2 - chr3R 6743270 exon zen2 - chr3R_7_6740001 chr3R_6740001 RAL-513 1798 chr3R 6773537 6773584 chr3R 6773645 6773646 5 90 3.5 4.5 4.0 1.0 109 chr3R 6773537 intron CR42721 + chr3R 6773592 intron CR42721 + chr3R 6773646 intron CR42721 + chr3R_5_6770001 chr3R_6770001 RAL-513 1799 chr3R 6780428 6780480 chr3R 6780531 6780568 11 100 4.5 0.0 2.2 3.4 140 chr3R 6780428 intergenic not near genes chr3R 6780498 intergenic not near genes chr3R 6780568 intergenic not near genes chr3R_11_6780001 chr3R_6780001 RAL-513 1800 chr3R 6782423 6782427 chr3R 6782515 6782526 5 97 6.0 7.0 6.5 0.7 103 chr3R 6782423 intergenic not near genes chr3R 6782474 intergenic not near genes chr3R 6782526 intergenic not near genes chr3R_5_6780001 chr3R_6780001 RAL-513 1801 chr3R 6782429 6782468 chr3R 6782513 6782567 17 93 2.5 7.5 5.0 2.8 138 chr3R 6782429 intergenic not near genes chr3R 6782498 intergenic not near genes chr3R 6782567 intergenic not near genes chr3R_17_6780001 chr3R_6780001 RAL-513 1802 chr3R 6807249 6807292 chr3R 6807351 6807392 6 99 2.5 2.5 2.5 1.7 143 chr3R 6807249 intergenic not near genes chr3R 6807320 intergenic not near genes chr3R 6807392 intergenic not near genes chr3R_6_6805001 chr3R_6805001 RAL-513 1803 chr3R 6828011 6828031 chr3R 6828106 6828127 4 94 3.5 4.0 3.8 0.8 116 chr3R 6828011 intron Scr - chr3R 6828069 intron Scr - chr3R 6828127 intron Scr - chr3R_4_6825001 chr3R_6825001 RAL-513 1804 chr3R 6828034 6828039 chr3R 6828101 6828135 4 89 3.5 3.0 3.2 1.0 101 chr3R 6828034 intron Scr - chr3R 6828084 intron Scr - chr3R 6828135 intron Scr - chr3R_4_6825001 chr3R_6825001 RAL-513 1805 chr3R 6856365 6856399 chr3R 6856502 6856536 4 137 3.0 3.0 3.0 1.0 171 chr3R 6856365 intergenic not near genes chr3R 6856450 intergenic not near genes chr3R 6856536 intergenic not near genes chr3R_4_6855001 chr3R_6855001 RAL-513 1806 chr3R 6862199 6862252 chr3R 6862306 6862356 13 104 3.0 3.5 3.2 3.1 157 chr3R 6862199 intergenic not near genes chr3R 6862278 intergenic not near genes chr3R 6862356 intergenic not near genes chr3R_13_6860001 chr3R_6860001 RAL-513 1807 chr3R 6891240 6891270 chr3R 6891315 6891366 4 89 3.0 5.5 4.2 0.8 126 chr3R 6891240 intergenic not near genes chr3R 6891303 intergenic not near genes chr3R 6891366 intergenic not near genes chr3R_4_6890001 chr3R_6890001 RAL-513 1808 chr3R 6923561 6923617 chr3R 6923668 6923695 8 101 3.0 3.5 3.2 1.9 134 chr3R 6923561 intron Antp - chr3R 6923628 intron Antp - chr3R 6923695 intron Antp - chr3R_8_6920001 chr3R_6920001 RAL-513 1809 chr3R 6961181 6961203 chr3R 6961258 6961302 4 94 2.5 3.0 2.8 1.1 121 chr3R 6961181 intron Antp - chr3R 6961242 intron Antp - chr3R 6961302 intron Antp - chr3R_4_6960001 chr3R_6960001 RAL-513 1810 chr3R 7012187 7012227 chr3R 7012280 7012324 11 92 3.0 5.5 4.2 2.1 137 chr3R 7012187 intergenic not near genes chr3R 7012256 intergenic not near genes chr3R 7012324 intergenic not near genes chr3R_11_7010001 chr3R_7010001 RAL-513 1811 chr3R 7026851 7026887 chr3R 7026940 7026993 13 91 5.0 2.0 3.5 2.9 142 chr3R 7026851 intergenic not near genes chr3R 7026922 intergenic not near genes chr3R 7026993 intergenic not near genes chr3R_13_7025001 chr3R_7025001 RAL-513 1812 chr3R 7103289 7103318 chr3R 7103361 7103386 13 86 8.0 5.0 6.5 1.7 97 chr3R 7103289 intron Alh - chr3R 7103338 intron Alh - chr3R 7103386 intron Alh - chr3R_13_7100001 chr3R_7100001 RAL-513 1813 chr3R 7126484 7126528 chr3R 7126599 7126642 6 115 1.0 1.5 1.2 2.7 158 chr3R 7126484 3` UTR,3` UTR CG10098 +,CG10068 - chr3R 7126563 3` UTR CG10068 - chr3R 7126642 3` UTR CG10068 - chr3R_6_7125001 chr3R_7125001 RAL-513 1814 chr3R 7173679 7173707 chr3R 7173779 7173807 8 99 1.5 4.0 2.8 2.1 128 chr3R 7173679 intron sas + chr3R 7173743 intron sas + chr3R 7173807 intron sas + chr3R_8_7170001 chr3R_7170001 RAL-513 1815 chr3R 7217447 7217488 chr3R 7217687 7217728 10 239 2.5 4.0 3.2 2.4 281 chr3R 7217447 intergenic CG14605 -,CG14606 - chr3R 7217588 intergenic CG14605 - chr3R 7217728 3` UTR CG14605 - chr3R_10_7215001 chr3R_7215001 RAL-513 1816 chr3R 7252400 7252424 chr3R 7252507 7252531 8 105 1.5 3.0 2.2 2.5 131 chr3R 7252400 3` UTR Gld - chr3R 7252466 3` UTR Gld - chr3R 7252531 3` UTR Gld - chr3R_8_7250001 chr3R_7250001 RAL-513 1817 chr3R 7269898 7269913 chr3R 7270010 7270027 5 114 2.5 3.0 2.8 1.3 129 chr3R 7269898 3` UTR Syt4 + chr3R 7269962 3` UTR Syt4 + chr3R 7270027 3` UTR Syt4 + chr3R_5_7265001 chr3R_7265001 RAL-513 1818 chr3R 7269915 7269936 chr3R 7270009 7270032 4 101 2.0 3.0 2.5 1.1 117 chr3R 7269915 3` UTR Syt4 + chr3R 7269974 3` UTR Syt4 + chr3R 7270032 3` UTR Syt4 + chr3R_4_7265001 chr3R_7265001 RAL-513 1819 chr3R 7335080 7335120 chr3R 7335244 7335274 6 165 2.0 4.0 3.0 1.5 194 chr3R 7335080 intergenic not near genes chr3R 7335177 intergenic not near genes chr3R 7335274 intergenic not near genes chr3R_6_7335001 chr3R_7335001 RAL-513 1820 chr3R 7447971 7448000 chr3R 7448069 7448097 13 97 7.5 5.0 6.2 1.8 126 chr3R 7447971 intergenic not near genes chr3R 7448034 intergenic not near genes chr3R 7448097 intergenic not near genes chr3R_13_7445001 chr3R_7445001 RAL-513 1821 chr3R 7497896 7497912 chr3R 7498009 7498020 5 112 5.0 4.5 4.8 0.9 124 chr3R 7497896 intron alpha-Est9 - chr3R 7497958 intron alpha-Est9 - chr3R 7498020 intron alpha-Est9 - chr3R_5_7495001 chr3R_7495001 RAL-513 1822 chr3R 7552944 7552997 chr3R 7553052 7553105 10 104 3.0 1.5 2.2 3.1 161 chr3R 7552944 intergenic not near genes chr3R 7553024 intergenic not near genes chr3R 7553105 intergenic not near genes chr3R_10_7550001 chr3R_7550001 RAL-513 1823 chr3R 7664587 7664634 chr3R 7664689 7664736 11 95 3.5 6.5 5.0 1.8 149 chr3R 7664587 intron Nlg1 + chr3R 7664662 intron Nlg1 + chr3R 7664736 intron Nlg1 + chr3R_11_7660001 chr3R_7660001 RAL-513 1824 chr3R 7677907 7677937 chr3R 7678038 7678070 5 128 3.5 4.0 3.8 1.0 163 chr3R 7677907 intron Nlg1 + chr3R 7677988 intron Nlg1 + chr3R 7678070 intron Nlg1 + chr3R_5_7675001 chr3R_7675001 RAL-513 1825 chr3R 7677940 7677947 chr3R 7678030 7678070 5 105 2.5 3.0 2.8 1.3 130 chr3R 7677940 intron Nlg1 + chr3R 7678005 intron Nlg1 + chr3R 7678070 intron Nlg1 + chr3R_5_7675001 chr3R_7675001 RAL-513 1826 chr3R 7680860 7680870 chr3R 7681479 7681512 4 625 3.5 2.5 3.0 1.0 652 chr3R 7680860 intron Nlg1 + chr3R 7681186 intron Nlg1 + chr3R 7681512 intron Nlg1 + chr3R_4_7680001 chr3R_7680001 RAL-513 1827 chr3R 7694558 7694597 chr3R 7713639 7713663 invader3 4 19077 0.5 2.0 1.2 1.8 19105 chr3R 7694558 3` UTR Nlg1 + chr3R 7704110 intergenic not near genes chr3R 7713663 intergenic not near genes chr3R_4_7700001 chr3R_7700001 RAL-513 1828 chr3R 7729446 7729485 chr3R 7737403 7737440 Stalker2 13 7955 7.0 5.5 6.2 1.8 7994 chr3R 7729446 intergenic not near genes chr3R 7733443 intergenic not near genes chr3R 7737440 intergenic not near genes chr3R_13_7730001 chr3R_7730001 RAL-513 1829 chr3R 7729488 7729493 chr3R 7737402 7737444 Stalker2 4 7935 6.5 5.0 5.8 0.6 7956 chr3R 7729488 intergenic not near genes chr3R 7733466 intergenic not near genes chr3R 7737444 intergenic not near genes chr3R_4_7730001 chr3R_7730001 RAL-513 1830 chr3R 7849625 7849676 chr3R 7850812 7850858 1360 12 1180 1.5 5.0 3.2 2.9 1233 chr3R 7849625 intron CG34384 + chr3R 7850242 intron CG34384 + chr3R 7850858 intron CG34384 + chr3R_12_7850001 chr3R_7850001 RAL-513 1831 chr3R 7857623 7857673 chr3R 7857726 7857759 12 98 3.0 2.0 2.5 3.4 136 chr3R 7857623 3` UTR CG17816 - chr3R 7857691 3` UTR CG17816 - chr3R 7857759 3` UTR CG17816 - chr3R_12_7855001 chr3R_7855001 RAL-513 1832 chr3R 7883126 7883157 chr3R 7883224 7883254 7 92 2.5 4.5 3.5 1.6 128 chr3R 7883126 intron CG17816 - chr3R 7883190 intron CG17816 - chr3R 7883254 intron CG17816 - chr3R_7_7880001 chr3R_7880001 RAL-513 1833 chr3R 7948433 7948462 chr3R 7948530 7948558 4 93 6.5 4.5 5.5 0.6 125 chr3R 7948433 intron dsx - chr3R 7948496 intron dsx - chr3R 7948558 intron dsx - chr3R_4_7945001 chr3R_7945001 RAL-513 1834 chr3R 7953323 7953366 chr3R 7953426 7953468 10 100 5.0 3.5 4.2 1.9 145 chr3R 7953323 intron dsx - chr3R 7953396 intron dsx - chr3R 7953468 intron dsx - chr3R_10_7950001 chr3R_7950001 RAL-513 1835 chr3R 7955914 7955968 chr3R 7956011 7956056 19 91 2.0 1.5 1.8 6.8 142 chr3R 7955914 intron dsx - chr3R 7955985 intron dsx - chr3R 7956056 intron dsx - chr3R_19_7955001 chr3R_7955001 RAL-513 1836 chr3R 7965293 7965344 chr3R 7965400 7965420 14 103 2.5 2.5 2.5 4.0 127 chr3R 7965293 intron dsx - chr3R 7965356 intron dsx - chr3R 7965420 intron dsx - chr3R_14_7965001 chr3R_7965001 RAL-513 1837 chr3R 7973298 7973344 chr3R 7974379 7974418 1360 7 1082 2.5 3.0 2.8 1.8 1120 chr3R 7973298 intergenic not near genes chr3R 7973858 intergenic not near genes chr3R 7974418 3` UTR CD98hc - chr3R_7_7970001 chr3R_7970001 RAL-513 1838 chr3R 8094397 8094432 chr3R 8099722 8099754 Transpac 5 5324 3.5 8.5 6.0 0.7 5357 chr3R 8094397 intron CG7900 + chr3R 8097076 intron CG7900 + chr3R 8099754 intron CG7900 + chr3R_5_8095001 chr3R_8095001 RAL-513 1839 chr3R 8101749 8101790 chr3R 8104846 8104873 G2 4 3092 2.5 4.5 3.5 0.9 3124 chr3R 8101749 exon CG7900 + chr3R 8103311 intron CG7900 + chr3R 8104873 3` UTR CG7900 + chr3R_4_8100001 chr3R_8100001 RAL-513 1840 chr3R 8126281 8126315 chr3R 8126385 8126418 6 104 2.5 4.0 3.2 1.4 137 chr3R 8126281 intron CG9667 - chr3R 8126350 5` UTR CG9667 - chr3R 8126418 intergenic CG9667 -,Gie + chr3R_6_8125001 chr3R_8125001 RAL-513 1841 chr3R 8207555 8207588 chr3R 8208404 8208425 F-element 8 859 6.5 5.5 6.0 1.1 870 chr3R 8207555 intergenic not near genes chr3R 8207990 intergenic not near genes chr3R 8208425 intergenic not near genes chr3R_8_8205001 chr3R_8205001 RAL-513 1842 chr3R 8339246 8339247 chr3R 21907534 21907536 19 13568288 13.0 18.5 15.8 1.1 13568290 chr3R 8339246 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_19_15120001 chr3R_15120001 RAL-513 1843 chr3R 8393565 8393603 chr3R 8393664 8393688 7 86 3.0 3.0 3.0 1.8 123 chr3R 8393565 intron CG45263 - chr3R 8393626 intron CG45263 - chr3R 8393688 intron CG45263 - chr3R_7_8390001 chr3R_8390001 RAL-513 1844 chr3R 8402995 8403015 chr3R 8412179 8412200 roo 6 9184 6.5 3.0 4.8 1.0 9205 chr3R 8402995 intron CG45263 - chr3R 8407598 intron CG45263 - chr3R 8412200 intron CG45263 - chr3R_6_8405001 chr3R_8405001 RAL-513 1845 chr3R 8403020 8403040 chr3R 8412176 8412193 roo 7 9167 3.5 2.5 3.0 1.8 9173 chr3R 8403020 intron CG45263 - chr3R 8407606 intron CG45263 - chr3R 8412193 intron CG45263 - chr3R_7_8405001 chr3R_8405001 RAL-513 1846 chr3R 8460528 8460536 chr3R 8463581 8463590 4 3054 26.5 33.0 29.8 0.1 3062 chr3R 8460528 intron CG45263 - chr3R 8462059 intron CG45263 - chr3R 8463590 intron CG45263 - chr3R_4_8460001 chr3R_8460001 RAL-513 1847 chr3R 8460523 8460544 chr3R 8463594 8463614 8 3067 29.0 32.0 30.5 0.3 3091 chr3R 8460523 intron CG45263 - chr3R 8462068 intron CG45263 - chr3R 8463614 intron CG45263 - chr3R_8_8460001 chr3R_8460001 RAL-513 1848 chr3R 8478086 8478110 chr3R 8478161 8478205 6 95 1.5 5.0 3.2 1.4 119 chr3R 8478086 intergenic CG45263 - chr3R 8478146 intergenic not near genes chr3R 8478205 intergenic not near genes chr3R_6_8475001 chr3R_8475001 RAL-513 1849 chr3R 8570477 8570506 chr3R 8575112 8575128 HMS-Beagle 7 4647 5.5 5.5 5.5 1.1 4651 chr3R 8570477 intergenic not near genes chr3R 8572802 intergenic not near genes chr3R 8575128 intergenic not near genes chr3R_7_8570001 chr3R_8570001 RAL-513 1850 chr3R 8601761 8601797 chr3R 8610934 8610970 roo 8 9169 3.5 6.5 5.0 1.3 9209 chr3R 8601761 intron 5-HT2B + chr3R 8606366 intron 5-HT2B + chr3R 8610970 intron 5-HT2B + chr3R_8_8605001 chr3R_8605001 RAL-513 1851 chr3R 8614793 8614806 chr3R 8614995 8614997 6 210 0.5 4.5 2.5 1.7 204 chr3R 8614793 intron 5-HT2B + chr3R 8614895 intron 5-HT2B + chr3R 8614997 intron 5-HT2B + chr3R_6_8610001 chr3R_8610001 RAL-513 1852 chr3R 8621525 8621563 chr3R 8621619 8621624 9 86 4.0 6.0 5.0 1.5 99 chr3R 8621525 intron 5-HT2B + chr3R 8621574 intron 5-HT2B + chr3R 8621624 intron 5-HT2B + chr3R_9_8620001 chr3R_8620001 RAL-513 1853 chr3R 8636931 8636959 chr3R 8637254 8637281 5 321 3.0 12.5 7.8 0.6 350 chr3R 8636931 intergenic not near genes chr3R 8637106 intergenic not near genes chr3R 8637281 intergenic not near genes chr3R_5_8635001 chr3R_8635001 RAL-513 1854 chr3R 8642420 8642444 chr3R 8642505 8642541 5 89 5.5 5.5 5.5 0.8 121 chr3R 8642420 intergenic not near genes chr3R 8642480 intergenic not near genes chr3R 8642541 intergenic not near genes chr3R_5_8640001 chr3R_8640001 RAL-513 1855 chr3R 8707350 8707359 chr3R 8709811 8709818 jockey 6 2459 6.0 10.5 8.2 0.7 2468 chr3R 8707350 intergenic not near genes chr3R 8708584 intergenic not near genes chr3R 8709818 intergenic not near genes chr3R_6_8705001 chr3R_8705001 RAL-513 1856 chr3R 8707368 8707384 chr3R 8709808 8709845 jockey 7 2453 3.0 10.5 6.8 0.9 2477 chr3R 8707368 intergenic not near genes chr3R 8708606 intergenic not near genes chr3R 8709845 intergenic not near genes chr3R_7_8705001 chr3R_8705001 RAL-513 1857 chr3R 8798632 8798682 chr3R 8798734 8798785 18 100 1.5 3.5 2.5 5.1 153 chr3R 8798632 intron,intron Pif1A -,Pif1B - chr3R 8798708 intron,intron Pif1A -,Pif1B - chr3R 8798785 intron,intron Pif1A -,Pif1B - chr3R_18_8795001 chr3R_8795001 RAL-513 1858 chr3R 8894867 8894905 chr3R 8896043 8896079 1360 15 1175 2.0 5.5 3.8 3.1 1212 chr3R 8894867 intron pyd - chr3R 8895473 intron pyd - chr3R 8896079 intron pyd - chr3R_15_8895001 chr3R_8895001 RAL-513 1859 chr3R 8917876 8917892 chr3R 8917975 8917992 10 100 5.0 3.0 4.0 2.0 116 chr3R 8917876 intron pyd - chr3R 8917934 intron pyd - chr3R 8917992 intron pyd - chr3R_10_8915001 chr3R_8915001 RAL-513 1860 chr3R 8917896 8917912 chr3R 8917973 8918000 6 93 1.5 3.0 2.2 1.9 104 chr3R 8917896 intron pyd - chr3R 8917948 intron pyd - chr3R 8918000 intron pyd - chr3R_6_8915001 chr3R_8915001 RAL-513 1861 chr3R 8966659 8966681 chr3R 8966802 8966821 6 152 6.0 7.0 6.5 0.8 162 chr3R 8966659 intergenic not near genes chr3R 8966740 intergenic not near genes chr3R 8966821 intergenic not near genes chr3R_6_8965001 chr3R_8965001 RAL-513 1862 chr3R 8969895 8969943 chr3R 8970006 8970038 12 106 7.5 5.0 6.2 1.7 143 chr3R 8969895 intergenic not near genes chr3R 8969966 intergenic not near genes chr3R 8970038 intergenic not near genes chr3R_12_8965001 chr3R_8965001 RAL-513 1863 chr3R 9101844 9101872 chr3R 9101941 9101971 8 108 3.5 2.5 3.0 2.0 127 chr3R 9101844 intron pum - chr3R 9101908 intron pum - chr3R 9101971 intron pum - chr3R_8_9100001 chr3R_9100001 RAL-513 1864 chr3R 9108847 9108881 chr3R 9108943 9108975 8 95 5.0 2.0 3.5 1.8 128 chr3R 9108847 intron pum - chr3R 9108911 intron pum - chr3R 9108975 intron pum - chr3R_8_9105001 chr3R_9105001 RAL-513 1865 chr3R 9141119 9141173 chr3R 9141223 9141228 14 97 1.5 4.0 2.8 3.7 109 chr3R 9141119 intron pum - chr3R 9141174 intron pum - chr3R 9141228 intron pum - chr3R_14_9140001 chr3R_9140001 RAL-513 1866 chr3R 9319558 9319609 chr3R 9320011 9320042 jockey 7 448 5.5 4.0 4.8 1.2 484 chr3R 9319558 intron CG8861 - chr3R 9319800 intron CG8861 - chr3R 9320042 intron CG8861 - chr3R_7_9315001 chr3R_9315001 RAL-513 1867 chr3R 9361824 9361844 chr3R 9362060 9362086 pogo 4 244 1.0 3.5 2.2 1.2 262 chr3R 9361824 3` UTR CG45050 + chr3R 9361955 3` UTR CG45050 + chr3R 9362086 3` UTR CG45050 + chr3R_4_9360001 chr3R_9360001 RAL-513 1868 chr3R 9382795 9382838 chr3R 9382940 9382982 14 140 3.5 4.0 3.8 2.9 187 chr3R 9382795 intron FER - chr3R 9382888 intron FER - chr3R 9382982 intron FER - chr3R_14_9380001 chr3R_9380001 RAL-513 1869 chr3R 9614089 9614136 chr3R 9614250 9614301 20 157 3.5 2.5 3.0 5.0 212 chr3R 9614089 intron CG8312 + chr3R 9614195 intron CG8312 + chr3R 9614301 intron CG8312 + chr3R_20_9610001 chr3R_9610001 RAL-513 1870 chr3R 9700230 9700247 chr3R 9700327 9700342 4 96 11.5 4.5 8.0 0.4 112 chr3R 9700230 intron Unc-115a - chr3R 9700286 intron Unc-115a - chr3R 9700342 intron Unc-115a - chr3R_4_9700001 chr3R_9700001 RAL-513 1871 chr3R 9891460 9891475 chr3R 9891620 9891634 6 158 4.5 1.0 2.8 1.6 174 chr3R 9891460 intron Glut4EF + chr3R 9891547 intron Glut4EF + chr3R 9891634 intron Glut4EF + chr3R_6_9890001 chr3R_9890001 RAL-513 1872 chr3R 9898994 9899047 chr3R 9899112 9899162 15 106 1.5 6.0 3.8 3.1 168 chr3R 9898994 intron Glut4EF + chr3R 9899078 intron Glut4EF + chr3R 9899162 intron Glut4EF + chr3R_15_9895001 chr3R_9895001 RAL-513 1873 chr3R 9899854 9899855 chr3R 9902646 9902654 4 2789 25.5 21.5 23.5 0.2 2800 chr3R 9899854 intron Glut4EF + chr3R 9901254 intron Glut4EF + chr3R 9902654 intron Glut4EF + chr3R_4_9900001 chr3R_9900001 RAL-513 1874 chr3R 9899853 9899875 chr3R 9902658 9902674 4 2800 28.0 23.0 25.5 0.2 2821 chr3R 9899853 intron Glut4EF + chr3R 9901264 intron Glut4EF + chr3R 9902674 intron Glut4EF + chr3R_4_9900001 chr3R_9900001 RAL-513 1875 chr3R 9905241 9905250 chr3R 9905595 9905600 4 354 4.0 8.0 6.0 0.6 359 chr3R 9905241 intron Glut4EF + chr3R 9905420 intron Glut4EF + chr3R 9905600 intron Glut4EF + chr3R_4_9905001 chr3R_9905001 RAL-513 1876 chr3R 9927997 9928019 chr3R 9928096 9928119 6 100 5.5 0.5 3.0 1.5 122 chr3R 9927997 intron Glut4EF + chr3R 9928058 intron Glut4EF + chr3R 9928119 intron Glut4EF + chr3R_6_9925001 chr3R_9925001 RAL-513 1877 chr3R 9936853 9936911 chr3R 9936949 9937006 14 93 3.5 1.5 2.5 4.0 153 chr3R 9936853 intron Glut4EF + chr3R 9936930 intron Glut4EF + chr3R 9937006 intron Glut4EF + chr3R_14_9935001 chr3R_9935001 RAL-513 1878 chr3R 9937481 9937501 chr3R 9937686 9937703 5 205 6.0 5.0 5.5 0.8 222 chr3R 9937481 intron Glut4EF + chr3R 9937592 intron Glut4EF + chr3R 9937703 intron Glut4EF + chr3R_5_9935001 chr3R_9935001 RAL-513 1879 chr3R 9954284 9954299 chr3R 9954380 9954426 4 119 0.0 4.0 2.0 1.3 142 chr3R 9954284 intron Glut4EF + chr3R 9954355 intron Glut4EF + chr3R 9954426 intron Glut4EF + chr3R_4_9950001 chr3R_9950001 RAL-513 1880 chr3R 10062226 10062273 chr3R 10062369 10062416 13 141 6.0 7.0 6.5 1.7 190 chr3R 10062226 intergenic CR45205 -,CG33630 + chr3R 10062321 intergenic CG33630 +,CR45205 - chr3R 10062416 intergenic CG33630 +,CR45205 - chr3R_13_10060001 chr3R_10060001 RAL-513 1881 chr3R 10073750 10073803 chr3R 10073879 10073932 13 126 1.0 6.5 3.8 2.7 182 chr3R 10073750 3` UTR nerfin-2 + chr3R 10073841 3` UTR CG5361 - chr3R 10073932 exon CG5361 - chr3R_13_10070001 chr3R_10070001 RAL-513 1882 chr3R 10192268 10192304 chr3R 10192474 10192485 11 198 1.0 8.0 4.5 2.0 217 chr3R 10192268 intron Syn + chr3R 10192376 intron Syn + chr3R 10192485 intron Syn + chr3R_11_10190001 chr3R_10190001 RAL-513 1883 chr3R 10231767 10231813 chr3R 10237364 10237387 mdg3 8 5594 3.5 4.0 3.8 1.7 5620 chr3R 10231767 intron CG42795 + chr3R 10234577 intron CG42795 + chr3R 10237387 intron CG42795 + chr3R_8_10230001 chr3R_10230001 RAL-513 1884 chr3R 10255363 10255387 chr3R 10260821 10260847 I-element 4 5456 6.0 6.0 6.0 0.6 5484 chr3R 10255363 3` UTR Sirt6 - chr3R 10258105 intron Sirt6 - chr3R 10260847 exon Sirt6 - chr3R_4_10255001 chr3R_10255001 RAL-513 1885 chr3R 10275564 10275580 chr3R 10275633 10275657 6 89 2.5 6.5 4.5 1.1 93 chr3R 10275564 intron CG43143 + chr3R 10275610 intron CG43143 + chr3R 10275657 intron CG43143 + chr3R_6_10275001 chr3R_10275001 RAL-513 1886 chr3R 10306956 10307007 chr3R 10312195 10312246 15 5240 27.0 15.5 21.2 0.7 5290 chr3R 10306956 exon CG43143 + chr3R 10309601 exon CG6293 - chr3R 10312246 3` UTR Bruce - chr3R_15_10305001 chr3R_10305001 RAL-513 1887 chr3R 10401889 10401926 chr3R 10402084 10402107 16 200 5.0 3.5 4.2 3.1 218 chr3R 10401889 exon mthl11 + chr3R 10401998 intron mthl11 + chr3R 10402107 exon mthl11 + chr3R_16_10400001 chr3R_10400001 RAL-513 1888 chr3R 10434463 10434478 chr3R 10434621 10434654 6 173 5.0 1.5 3.2 1.4 191 chr3R 10434463 intergenic Cyp12e1 + chr3R 10434558 intergenic Cyp12e1 + chr3R 10434654 intergenic Cyp12e1 + chr3R_6_10430001 chr3R_10430001 RAL-513 1889 chr3R 10531858 10531881 chr3R 10531955 10531969 5 96 6.5 1.0 3.8 1.0 111 chr3R 10531858 intron hth - chr3R 10531914 intron hth - chr3R 10531969 intron hth - chr3R_5_10530001 chr3R_10530001 RAL-513 1890 chr3R 10531891 10531899 chr3R 10531948 10531967 4 82 5.0 0.5 2.8 1.1 76 chr3R 10531891 intron hth - chr3R 10531929 intron hth - chr3R 10531967 intron hth - chr3R_4_10530001 chr3R_10530001 RAL-513 1891 chr3R 10535326 10535332 chr3R 10535439 10535445 5 113 2.5 0.0 1.2 2.3 119 chr3R 10535326 intron hth - chr3R 10535386 intron hth - chr3R 10535445 intron hth - chr3R_5_10535001 chr3R_10535001 RAL-513 1892 chr3R 10723755 10723778 chr3R 10723865 10723890 11 111 6.0 0.5 3.2 2.6 135 chr3R 10723755 intergenic not near genes chr3R 10723822 intergenic not near genes chr3R 10723890 intergenic not near genes chr3R_11_10720001 chr3R_10720001 RAL-513 1893 chr3R 10723781 10723794 chr3R 10723856 10723878 6 96 2.0 0.5 1.2 2.7 97 chr3R 10723781 intergenic not near genes chr3R 10723830 intergenic not near genes chr3R 10723878 intergenic not near genes chr3R_6_10720001 chr3R_10720001 RAL-513 1894 chr3R 10727625 10727677 chr3R 10727724 10727777 9 94 4.0 3.5 3.8 1.9 152 chr3R 10727625 intergenic not near genes chr3R 10727701 intergenic not near genes chr3R 10727777 intergenic not near genes chr3R_9_10725001 chr3R_10725001 RAL-513 1895 chr3R 10732307 10732346 chr3R 10733198 10733236 12 887 3.0 3.0 3.0 3.0 929 chr3R 10732307 intergenic not near genes chr3R 10732772 intergenic not near genes chr3R 10733236 intergenic not near genes chr3R_12_10730001 chr3R_10730001 RAL-513 1896 chr3R 10804158 10804199 chr3R 10811710 10811751 17.6 8 7543 2.5 2.0 2.2 2.5 7593 chr3R 10804158 intergenic CG14692 - chr3R 10807954 intergenic not near genes chr3R 10811751 3` UTR CG14693 - chr3R_8_10805001 chr3R_10805001 RAL-513 1897 chr3R 10886867 10886906 chr3R 10886954 10887000 9 92 4.5 4.0 4.2 1.7 133 chr3R 10886867 intron Leash + chr3R 10886934 intron Leash + chr3R 10887000 intron Leash + chr3R_9_10885001 chr3R_10885001 RAL-513 1898 chr3R 10919664 10919718 chr3R 10919762 10919816 15 93 5.5 3.5 4.5 2.7 152 chr3R 10919664 intergenic not near genes chr3R 10919740 intergenic not near genes chr3R 10919816 intergenic not near genes chr3R_15_10915001 chr3R_10915001 RAL-513 1899 chr3R 10920052 10920079 chr3R 10920122 10920177 6 90 5.5 6.5 6.0 0.9 125 chr3R 10920052 intergenic not near genes chr3R 10920114 intergenic not near genes chr3R 10920177 intergenic not near genes chr3R_6_10920001 chr3R_10920001 RAL-513 1900 chr3R 10944221 10944254 chr3R 10944321 10944364 5 108 2.5 1.0 1.8 1.8 143 chr3R 10944221 intergenic not near genes chr3R 10944292 intergenic not near genes chr3R 10944364 intergenic not near genes chr3R_5_10940001 chr3R_10940001 RAL-513 1901 chr3R 10963541 10963587 chr3R 10963655 10963701 10 107 2.5 3.0 2.8 2.6 160 chr3R 10963541 intergenic not near genes chr3R 10963621 intergenic not near genes chr3R 10963701 intergenic not near genes chr3R_10_10960001 chr3R_10960001 RAL-513 1902 chr3R 10971464 10971511 chr3R 10971574 10971592 8 98 3.5 5.0 4.2 1.5 128 chr3R 10971464 intergenic not near genes chr3R 10971528 intergenic not near genes chr3R 10971592 intergenic not near genes chr3R_8_10970001 chr3R_10970001 RAL-513 1903 chr3R 10987270 10987299 chr3R 10988141 10988186 16 882 1.5 2.5 2.0 5.3 916 chr3R 10987270 intron CG34114 + chr3R 10987728 intron CG34114 + chr3R 10988186 intron CG34114 + chr3R_16_10985001 chr3R_10985001 RAL-513 1904 chr3R 11043075 11043125 chr3R 11043199 11043249 6 119 1.5 1.5 1.5 2.4 174 chr3R 11043075 intron CG34114 + chr3R 11043162 intron CG34114 + chr3R 11043249 intron CG34114 + chr3R_6_11040001 chr3R_11040001 RAL-513 1905 chr3R 11085468 11085484 chr3R 11085537 11085551 9 89 1.5 3.0 2.2 2.8 83 chr3R 11085468 3` UTR CR44940 - chr3R 11085510 intergenic CR44940 - chr3R 11085551 intergenic CR44940 - chr3R_9_11085001 chr3R_11085001 RAL-513 1906 chr3R 11102315 11102350 chr3R 11102408 11102438 9 86 5.0 3.0 4.0 1.8 123 chr3R 11102315 intergenic not near genes chr3R 11102376 intergenic not near genes chr3R 11102438 intergenic not near genes chr3R_9_11100001 chr3R_11100001 RAL-513 1907 chr3R 11103150 11103170 chr3R 11103252 11103256 7 100 0.0 0.0 0.0 7.0 106 chr3R 11103150 intergenic not near genes chr3R 11103203 intergenic not near genes chr3R 11103256 intergenic not near genes chr3R_7_11100001 chr3R_11100001 RAL-513 1908 chr3R 11130788 11130836 chr3R 11130980 11131028 15 191 4.5 4.0 4.2 2.9 240 chr3R 11130788 intergenic not near genes chr3R 11130908 intergenic not near genes chr3R 11131028 intergenic not near genes chr3R_15_11130001 chr3R_11130001 RAL-513 1909 chr3R 11144161 11144203 chr3R 11144557 11144601 6 395 3.5 4.5 4.0 1.2 440 chr3R 11144161 intergenic CheA86a - chr3R 11144381 3` UTR CheA86a - chr3R 11144601 exon CheA86a - chr3R_6_11140001 chr3R_11140001 RAL-513 1910 chr3R 11151665 11151699 chr3R 11156538 11156588 28 4878 44.5 32.0 38.2 0.7 4923 chr3R 11151665 3` UTR Ugt86Di - chr3R 11154126 intergenic Ugt86Di -,Ugt86Dc + chr3R 11156588 intergenic Ugt86Dc + chr3R_28_11150001 chr3R_11150001 RAL-513 1911 chr3R 11174574 11174615 chr3R 11175308 11175348 6 732 21.0 19.0 20.0 0.3 774 chr3R 11174574 exon Ugt86Dj - chr3R 11174961 intron Ugt86Dj - chr3R 11175348 exon Ugt86Dj - chr3R_6_11170001 chr3R_11170001 RAL-513 1912 chr3R 11197975 11198018 chr3R 11198084 11198105 8 105 3.0 3.0 3.0 2.0 130 chr3R 11197975 intron cu + chr3R 11198040 intron cu + chr3R 11198105 intron cu + chr3R_8_11195001 chr3R_11195001 RAL-513 1913 chr3R 11220047 11220065 chr3R 11220243 11220259 4 192 1.5 3.5 2.5 1.1 212 chr3R 11220047 5` UTR CG6689 - chr3R 11220153 intergenic CG6689 -,CG6693 - chr3R 11220259 intergenic CG6693 -,CG6689 - chr3R_4_11220001 chr3R_11220001 RAL-513 1914 chr3R 11269453 11269478 chr3R 11269597 11269621 5 141 1.0 5.5 3.2 1.2 168 chr3R 11269453 3` UTR CR31386 - chr3R 11269537 3` UTR CR31386 - chr3R 11269621 3` UTR CR31386 - chr3R_5_11265001 chr3R_11265001 RAL-513 1915 chr3R 11291445 11291474 chr3R 11291653 11291682 6 208 1.5 2.5 2.0 2.0 237 chr3R 11291445 intron CR31386 - chr3R 11291564 intron CR31386 - chr3R 11291682 intron CR31386 - chr3R_6_11290001 chr3R_11290001 RAL-513 1916 chr3R 11379219 11379233 chr3R 11388394 11388406 roo 4 9174 13.5 3.0 8.2 0.4 9187 chr3R 11379219 intron pros + chr3R 11383812 intron pros + chr3R 11388406 intron pros + chr3R_4_11380001 chr3R_11380001 RAL-513 1917 chr3R 11379235 11379269 chr3R 11388389 11388432 roo 13 9166 6.0 3.0 4.5 2.4 9197 chr3R 11379235 intron pros + chr3R 11383834 intron pros + chr3R 11388432 intron pros + chr3R_13_11380001 chr3R_11380001 RAL-513 1918 chr3R 11612600 11612648 chr3R 11612697 11612715 9 91 3.0 6.0 4.5 1.6 115 chr3R 11612600 intron Jupiter - chr3R 11612658 intron Jupiter - chr3R 11612715 intron Jupiter - chr3R_9_11610001 chr3R_11610001 RAL-513 1919 chr3R 11694726 11694753 chr3R 11694825 11694865 11 110 4.0 7.5 5.8 1.6 139 chr3R 11694726 intergenic Fer3 - chr3R 11694796 intergenic Fer3 - chr3R 11694865 intergenic not near genes chr3R_11_11690001 chr3R_11690001 RAL-513 1920 chr3R 11695718 11695772 chr3R 11695819 11695840 20 94 4.5 6.5 5.5 3.1 122 chr3R 11695718 intergenic not near genes chr3R 11695779 intergenic not near genes chr3R 11695840 intergenic not near genes chr3R_20_11695001 chr3R_11695001 RAL-513 1921 chr3R 11710185 11710231 chr3R 11710283 11710323 11 89 4.0 3.5 3.8 2.3 138 chr3R 11710185 intergenic not near genes chr3R 11710254 intergenic not near genes chr3R 11710323 intergenic not near genes chr3R_11_11710001 chr3R_11710001 RAL-513 1922 chr3R 11734147 11734171 chr3R 11734284 11734309 5 138 8.5 4.0 6.2 0.7 162 chr3R 11734147 intergenic not near genes chr3R 11734228 intergenic not near genes chr3R 11734309 intergenic not near genes chr3R_5_11730001 chr3R_11730001 RAL-513 1923 chr3R 11734172 11734187 chr3R 11734280 11734300 10 123 6.0 3.0 4.5 1.8 128 chr3R 11734172 intergenic not near genes chr3R 11734236 intergenic not near genes chr3R 11734300 intergenic not near genes chr3R_10_11730001 chr3R_11730001 RAL-513 1924 chr3R 11811084 11811120 chr3R 11811200 11811234 13 112 5.5 7.5 6.5 1.7 150 chr3R 11811084 5` UTR ClC-a - chr3R 11811159 intron ClC-a - chr3R 11811234 intron ClC-a - chr3R_13_11810001 chr3R_11810001 RAL-513 1925 chr3R 11841061 11841098 chr3R 11846255 11846277 BS 9 5196 3.0 6.5 4.8 1.6 5216 chr3R 11841061 intron CG6959 - chr3R 11843669 intron CG6959 - chr3R 11846277 intron CG6959 - chr3R_9_11840001 chr3R_11840001 RAL-513 1926 chr3R 11957842 11957877 chr3R 11958144 11958171 S-element 10 294 4.5 0.0 2.2 3.1 329 chr3R 11957842 intergenic not near genes chr3R 11958006 intergenic not near genes chr3R 11958171 intergenic not near genes chr3R_10_11955001 chr3R_11955001 RAL-513 1927 chr3R 11977842 11977867 chr3R 11977984 11978021 21 131 40.0 44.0 42.0 0.5 179 chr3R 11977842 3` UTR CR44135 - chr3R 11977932 3` UTR CR44135 - chr3R 11978021 3` UTR CR44135 - chr3R_21_11975001 chr3R_11975001 RAL-513 1928 chr3R 11981649 11981665 chr3R 11987262 11987272 5 5607 22.0 27.5 24.8 0.2 5623 chr3R 11981649 exon CG12224 - chr3R 11984460 exon CG3397 - chr3R 11987272 exon mfas - chr3R_5_11980001 chr3R_11980001 RAL-513 1929 chr3R 11981641 11981682 chr3R 11987273 11987287 7 5612 22.5 26.5 24.5 0.3 5646 chr3R 11981641 exon CG12224 - chr3R 11984464 exon CG3397 - chr3R 11987287 exon mfas - chr3R_7_11980001 chr3R_11980001 RAL-513 1930 chr3R 11992444 11992457 chr3R 11992533 11992558 8 97 0.0 8.0 4.0 1.6 114 chr3R 11992444 intron mfas - chr3R 11992501 intron mfas - chr3R 11992558 intron mfas - chr3R_8_11990001 chr3R_11990001 RAL-513 1931 chr3R 12022864 12022915 chr3R 12025061 12025111 pogo 19 2194 3.5 8.0 5.8 2.8 2247 chr3R 12022864 intergenic not near genes chr3R 12023988 intergenic not near genes chr3R 12025111 intergenic not near genes chr3R_19_12020001 chr3R_12020001 RAL-513 1932 chr3R 12080853 12080896 chr3R 12080949 12080994 7 90 6.5 2.0 4.2 1.3 141 chr3R 12080853 intron CG14741 - chr3R 12080924 intron CG14741 - chr3R 12080994 intron CG14741 - chr3R_7_12080001 chr3R_12080001 RAL-513 1933 chr3R 12116122 12116160 chr3R 12116230 12116266 6 108 3.0 6.0 4.5 1.1 144 chr3R 12116122 intergenic not near genes chr3R 12116194 intergenic not near genes chr3R 12116266 intergenic not near genes chr3R_6_12115001 chr3R_12115001 RAL-513 1934 chr3R 12149406 12149434 chr3R 12149490 12149511 5 90 1.0 4.0 2.5 1.4 105 chr3R 12149406 intron dpr15 - chr3R 12149458 intron dpr15 - chr3R 12149511 intron dpr15 - chr3R_5_12145001 chr3R_12145001 RAL-513 1935 chr3R 12183164 12183169 chr3R 12183270 12183275 4 106 9.5 6.5 8.0 0.4 111 chr3R 12183164 intergenic not near genes chr3R 12183220 intergenic not near genes chr3R 12183275 intergenic not near genes chr3R_4_12180001 chr3R_12180001 RAL-513 1936 chr3R 12183171 12183207 chr3R 12183264 12183268 12 100 2.5 4.5 3.5 2.7 97 chr3R 12183171 intergenic not near genes chr3R 12183220 intergenic not near genes chr3R 12183268 intergenic not near genes chr3R_12_12180001 chr3R_12180001 RAL-513 1937 chr3R 12247146 12247174 chr3R 12247230 12247279 9 98 2.0 4.5 3.2 2.1 133 chr3R 12247146 intergenic not near genes chr3R 12247212 intergenic not near genes chr3R 12247279 intergenic not near genes chr3R_9_12245001 chr3R_12245001 RAL-513 1938 chr3R 12267856 12267888 chr3R 12267955 12267988 10 96 1.5 4.5 3.0 2.5 132 chr3R 12267856 intron svp + chr3R 12267922 intron svp + chr3R 12267988 intron svp + chr3R_10_12265001 chr3R_12265001 RAL-513 1939 chr3R 12344116 12344139 chr3R 12344206 12344218 7 91 6.5 3.0 4.8 1.2 102 chr3R 12344116 intergenic not near genes chr3R 12344167 intergenic not near genes chr3R 12344218 intergenic not near genes chr3R_7_12340001 chr3R_12340001 RAL-513 1940 chr3R 12374313 12374332 chr3R 12374551 12374579 6 243 7.5 1.5 4.5 1.1 266 chr3R 12374313 exon GstD4 + chr3R 12374446 exon GstD4 + chr3R 12374579 exon GstD4 + chr3R_6_12370001 chr3R_12370001 RAL-513 1941 chr3R 12582796 12582826 chr3R 12582902 12582939 10 108 5.5 2.0 3.8 2.1 143 chr3R 12582796 intron Octbeta2R - chr3R 12582868 intron Octbeta2R - chr3R 12582939 intron Octbeta2R - chr3R_10_12580001 chr3R_12580001 RAL-513 1942 chr3R 12599378 12599390 chr3R 12599481 12599493 5 101 6.0 5.5 5.8 0.7 115 chr3R 12599378 intergenic not near genes chr3R 12599436 intergenic not near genes chr3R 12599493 intergenic not near genes chr3R_5_12595001 chr3R_12595001 RAL-513 1943 chr3R 12602375 12602412 chr3R 12602473 12602510 7 93 6.5 3.5 5.0 1.2 135 chr3R 12602375 intergenic not near genes chr3R 12602442 intergenic not near genes chr3R 12602510 intergenic not near genes chr3R_7_12600001 chr3R_12600001 RAL-513 1944 chr3R 12669356 12669401 chr3R 12669492 12669536 13 128 4.5 7.0 5.8 1.9 180 chr3R 12669356 intron CG14395 + chr3R 12669446 intron CG14395 + chr3R 12669536 intron CG14395 + chr3R_13_12665001 chr3R_12665001 RAL-513 1945 chr3R 12733462 12733495 chr3R 12733559 12733591 7 92 4.0 5.5 4.8 1.2 129 chr3R 12733462 intergenic not near genes chr3R 12733526 intergenic not near genes chr3R 12733591 intergenic not near genes chr3R_7_12730001 chr3R_12730001 RAL-513 1946 chr3R 12733498 12733507 chr3R 12733555 12733578 6 65 3.0 5.0 4.0 1.2 80 chr3R 12733498 intergenic not near genes chr3R 12733538 intergenic not near genes chr3R 12733578 intergenic not near genes chr3R_6_12730001 chr3R_12730001 RAL-513 1947 chr3R 12787922 12787949 chr3R 12788025 12788052 7 103 5.5 5.5 5.5 1.1 130 chr3R 12787922 intergenic not near genes chr3R 12787987 intergenic not near genes chr3R 12788052 intergenic not near genes chr3R_7_12785001 chr3R_12785001 RAL-513 1948 chr3R 12880115 12880123 chr3R 12880208 12880219 4 95 6.0 7.0 6.5 0.5 104 chr3R 12880115 intergenic not near genes chr3R 12880167 intergenic not near genes chr3R 12880219 intergenic not near genes chr3R_4_12880001 chr3R_12880001 RAL-513 1949 chr3R 12880137 12880150 chr3R 12880196 12880246 6 89 3.0 5.5 4.2 1.2 109 chr3R 12880137 intergenic not near genes chr3R 12880192 intergenic not near genes chr3R 12880246 intergenic not near genes chr3R_6_12880001 chr3R_12880001 RAL-513 1950 chr3R 12886906 12886956 chr3R 12887005 12887058 19 100 2.5 6.0 4.2 3.7 152 chr3R 12886906 intergenic not near genes chr3R 12886982 intergenic not near genes chr3R 12887058 intergenic not near genes chr3R_19_12885001 chr3R_12885001 RAL-513 1951 chr3R 12920146 12920176 chr3R 12925356 12925399 copia 6 5213 5.0 4.0 4.5 1.1 5253 chr3R 12920146 intron beat-Vb + chr3R 12922772 intron beat-Vb + chr3R 12925399 intron beat-Vb + chr3R_6_12920001 chr3R_12920001 RAL-513 1952 chr3R 12953182 12953232 chr3R 12953566 12953585 9 377 0.5 1.0 0.8 5.0 403 chr3R 12953182 intron grsm - chr3R 12953384 intron grsm - chr3R 12953585 intron grsm - chr3R_9_12950001 chr3R_12950001 RAL-513 1953 chr3R 12975314 12975339 chr3R 12975862 12975887 6 546 2.0 0.5 1.2 2.7 573 chr3R 12975314 intron CG7381 - chr3R 12975600 intron CG7381 - chr3R 12975887 intron CG7381 - chr3R_6_12975001 chr3R_12975001 RAL-513 1954 chr3R 12975341 12975349 chr3R 12975851 12975897 4 531 2.0 0.5 1.2 1.8 556 chr3R 12975341 intron CG7381 - chr3R 12975619 intron CG7381 - chr3R 12975897 intron CG7381 - chr3R_4_12975001 chr3R_12975001 RAL-513 1955 chr3R 13075338 13075370 chr3R 13075439 13075470 7 99 1.5 4.5 3.0 1.8 132 chr3R 13075338 intron sim + chr3R 13075404 intron sim + chr3R 13075470 intron sim + chr3R_7_13075001 chr3R_13075001 RAL-513 1956 chr3R 13120753 13120799 chr3R 13120848 13120890 8 91 3.0 3.0 3.0 2.0 137 chr3R 13120753 intron timeout + chr3R 13120822 intron timeout + chr3R 13120890 intron timeout + chr3R_8_13120001 chr3R_13120001 RAL-513 1957 chr3R 13135810 13135858 chr3R 13138004 13138053 pogo 11 2191 3.0 2.0 2.5 3.1 2243 chr3R 13135810 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136932 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138053 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_11_13135001 chr3R_13135001 RAL-513 1958 chr3R 13143023 13143053 chr3R 13148619 13148648 mdg3 4 5596 7.0 6.0 6.5 0.5 5625 chr3R 13143023 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145836 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148648 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_4_13145001 chr3R_13145001 RAL-513 1959 chr3R 13143054 13143065 chr3R 13148615 13148661 mdg3 5 5581 6.0 5.5 5.8 0.7 5607 chr3R 13143054 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145858 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148661 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_5_13145001 chr3R_13145001 RAL-513 1960 chr3R 13189991 13190035 chr3R 13190139 13190183 12 146 6.5 5.0 5.8 1.8 192 chr3R 13189991 intergenic CG14380 + chr3R 13190087 intergenic not near genes chr3R 13190183 intergenic not near genes chr3R_12_13190001 chr3R_13190001 RAL-513 1961 chr3R 13195936 13195982 chr3R 13196046 13196072 7 106 3.5 1.5 2.5 2.0 136 chr3R 13195936 intergenic not near genes chr3R 13196004 intergenic not near genes chr3R 13196072 intergenic not near genes chr3R_7_13195001 chr3R_13195001 RAL-513 1962 chr3R 13245214 13245250 chr3R 13245393 13245426 7 179 3.0 2.5 2.8 1.8 212 chr3R 13245214 intron Ace - chr3R 13245320 intron Ace - chr3R 13245426 intron Ace - chr3R_7_13245001 chr3R_13245001 RAL-513 1963 chr3R 13248639 13248677 chr3R 13248757 13248795 9 113 4.5 1.0 2.8 2.4 156 chr3R 13248639 intron Ace - chr3R 13248717 intron Ace - chr3R 13248795 intron Ace - chr3R_9_13245001 chr3R_13245001 RAL-513 1964 chr3R 13274196 13274246 chr3R 13274295 13274345 12 92 3.5 7.5 5.5 1.8 149 chr3R 13274196 intergenic not near genes chr3R 13274270 intergenic not near genes chr3R 13274345 intergenic not near genes chr3R_12_13270001 chr3R_13270001 RAL-513 1965 chr3R 13442350 13442370 chr3R 13442586 13442586 5 240 3.5 4.5 4.0 1.0 236 chr3R 13442350 intergenic not near genes chr3R 13442468 intergenic not near genes chr3R 13442586 intergenic CR45679 - chr3R_5_13440001 chr3R_13440001 RAL-513 1966 chr3R 13496652 13496662 chr3R 13496749 13496761 4 98 2.5 7.5 5.0 0.7 109 chr3R 13496652 intergenic not near genes chr3R 13496706 intergenic not near genes chr3R 13496761 intergenic not near genes chr3R_4_13495001 chr3R_13495001 RAL-513 1967 chr3R 13526672 13526705 chr3R 13526771 13526801 8 97 2.0 3.0 2.5 2.3 129 chr3R 13526672 intergenic not near genes chr3R 13526736 intergenic not near genes chr3R 13526801 intergenic not near genes chr3R_8_13525001 chr3R_13525001 RAL-513 1968 chr3R 13528046 13528086 chr3R 13528221 13528259 6 171 4.0 4.0 4.0 1.2 213 chr3R 13528046 intergenic not near genes chr3R 13528152 intergenic CG42778 - chr3R 13528259 intergenic CG42778 - chr3R_6_13525001 chr3R_13525001 RAL-513 1969 chr3R 13554829 13554842 chr3R 13554908 13554941 4 89 0.0 3.5 1.8 1.4 112 chr3R 13554829 intergenic not near genes chr3R 13554885 intergenic not near genes chr3R 13554941 intergenic not near genes chr3R_4_13550001 chr3R_13550001 RAL-513 1970 chr3R 13571356 13571386 chr3R 13571455 13571470 4 94 3.5 1.5 2.5 1.1 114 chr3R 13571356 intergenic not near genes chr3R 13571413 intergenic not near genes chr3R 13571470 intergenic not near genes chr3R_4_13570001 chr3R_13570001 RAL-513 1971 chr3R 13617660 13617702 chr3R 13617787 13617828 10 124 3.5 4.0 3.8 2.1 168 chr3R 13617660 intergenic CR45680 - chr3R 13617744 intergenic CR45680 - chr3R 13617828 3` UTR CR45680 - chr3R_10_13615001 chr3R_13615001 RAL-513 1972 chr3R 13683407 13683431 chr3R 13683518 13683542 7 109 1.5 2.0 1.8 2.5 135 chr3R 13683407 intron omd - chr3R 13683474 intron omd - chr3R 13683542 intron omd - chr3R_7_13680001 chr3R_13680001 RAL-513 1973 chr3R 13693028 13693028 chr3R 21907534 21907536 5 8214507 21.0 18.5 19.8 0.2 8214508 chr3R 13693028 3` UTR flfl + chr3R 17800282 exon CG17803 - chr3R 21907536 intergenic CG6678 + chr3R_5_17800001 chr3R_17800001 RAL-513 1974 chr3R 13714518 13714550 chr3R 13714664 13714708 6 151 0.0 6.0 3.0 1.5 190 chr3R 13714518 intergenic CR34044 - chr3R 13714613 intergenic CR34044 - chr3R 13714708 intergenic CG34383 + chr3R_6_13710001 chr3R_13710001 RAL-513 1975 chr3R 13863662 13863715 chr3R 13863769 13863808 14 105 1.5 2.5 2.0 4.7 146 chr3R 13863662 intergenic not near genes chr3R 13863735 intergenic not near genes chr3R 13863808 intergenic not near genes chr3R_14_13860001 chr3R_13860001 RAL-513 1976 chr3R 13948208 13948254 chr3R 13948306 13948321 14 94 2.5 5.5 4.0 2.8 113 chr3R 13948208 intergenic CG31517 + chr3R 13948264 intergenic CG31517 + chr3R 13948321 intergenic CG31517 + chr3R_14_13945001 chr3R_13945001 RAL-513 1977 chr3R 13975358 13975404 chr3R 13975457 13975504 13 96 4.5 2.5 3.5 2.9 146 chr3R 13975358 intron rdx - chr3R 13975431 intron rdx - chr3R 13975504 intron rdx - chr3R_13_13975001 chr3R_13975001 RAL-513 1978 chr3R 14037575 14037587 chr3R 14037676 14037685 6 99 7.5 9.0 8.2 0.7 110 chr3R 14037575 intergenic not near genes chr3R 14037630 intergenic not near genes chr3R 14037685 intergenic not near genes chr3R_6_14035001 chr3R_14035001 RAL-513 1979 chr3R 14062822 14062864 chr3R 14062917 14062961 10 92 6.5 3.0 4.8 1.7 139 chr3R 14062822 intron foxo + chr3R 14062892 intron foxo + chr3R 14062961 intron foxo + chr3R_10_14060001 chr3R_14060001 RAL-513 1980 chr3R 14067122 14067155 chr3R 14067221 14067254 8 99 5.0 1.0 3.0 2.0 132 chr3R 14067122 exon foxo + chr3R 14067188 intron foxo + chr3R 14067254 intron foxo + chr3R_8_14065001 chr3R_14065001 RAL-513 1981 chr3R 14083393 14083414 chr3R 14083513 14083535 5 121 5.0 0.0 2.5 1.4 142 chr3R 14083393 intron foxo + chr3R 14083464 intron foxo + chr3R 14083535 intron foxo + chr3R_5_14080001 chr3R_14080001 RAL-513 1982 chr3R 14117435 14117468 chr3R 14117513 14117564 6 93 3.5 3.0 3.2 1.4 129 chr3R 14117435 intron Kif19A - chr3R 14117500 intron Kif19A - chr3R 14117564 intron Kif19A - chr3R_6_14115001 chr3R_14115001 RAL-513 1983 chr3R 14132423 14132445 chr3R 14132556 14132578 5 133 0.0 1.5 0.8 2.8 155 chr3R 14132423 intergenic CG14356 - chr3R 14132500 intergenic CG14356 - chr3R 14132578 intergenic not near genes chr3R_5_14130001 chr3R_14130001 RAL-513 1984 chr3R 14180799 14180825 chr3R 14185576 14185594 F-element 7 4778 5.5 0.0 2.8 1.8 4795 chr3R 14180799 intron Dop1R1 - chr3R 14183196 intron Dop1R1 - chr3R 14185594 intron Dop1R1 - chr3R_7_14180001 chr3R_14180001 RAL-513 1985 chr3R 14194441 14194461 chr3R 14203592 14203612 roo 4 9152 4.5 0.0 2.2 1.2 9171 chr3R 14194441 intron Dop1R1 - chr3R 14199026 intron Dop1R1 - chr3R 14203612 intron Dop1R1 - chr3R_4_14195001 chr3R_14195001 RAL-513 1986 chr3R 14246386 14246413 chr3R 14247887 14247889 jockey 4 1500 4.5 3.5 4.0 0.8 1503 chr3R 14246386 intergenic not near genes chr3R 14247138 intergenic not near genes chr3R 14247889 intergenic not near genes chr3R_4_14245001 chr3R_14245001 RAL-513 1987 chr3R 14497400 14497434 chr3R 14497485 14497534 12 94 5.0 1.5 3.2 2.9 134 chr3R 14497400 intron CR44177 + chr3R 14497467 intron CR44177 + chr3R 14497534 intron CR44177 + chr3R_12_14495001 chr3R_14495001 RAL-513 1988 chr3R 14526330 14526357 chr3R 14526530 14526557 8 200 4.0 4.0 4.0 1.6 227 chr3R 14526330 intron Pde6 - chr3R 14526444 intron Pde6 - chr3R 14526557 intron Pde6 - chr3R_8_14525001 chr3R_14525001 RAL-513 1989 chr3R 14565779 14565825 chr3R 14565873 14565889 18 95 2.0 4.0 3.0 4.5 110 chr3R 14565779 intergenic CG14852 + chr3R 14565834 intergenic CG14852 + chr3R 14565889 intergenic CG14852 + chr3R_18_14565001 chr3R_14565001 RAL-513 1990 chr3R 14624697 14624739 chr3R 14624880 14624914 16 181 5.0 6.0 5.5 2.5 217 chr3R 14624697 intron put - chr3R 14624806 intron put - chr3R 14624914 intron put - chr3R_16_14620001 chr3R_14620001 RAL-513 1991 chr3R 14662294 14662340 chr3R 14662394 14662441 13 98 5.0 2.5 3.8 2.7 147 chr3R 14662294 exon Rad17 - chr3R 14662368 intron Rad17 - chr3R 14662441 exon Rad17 - chr3R_13_14660001 chr3R_14660001 RAL-513 1992 chr3R 14688107 14688151 chr3R 14688208 14688252 4 99 2.5 0.0 1.2 1.8 145 chr3R 14688107 intron Meltrin - chr3R 14688180 intron Meltrin - chr3R 14688252 intron Meltrin - chr3R_4_14685001 chr3R_14685001 RAL-513 1993 chr3R 14779050 14779083 chr3R 14779147 14779147 13 91 5.0 4.5 4.8 2.2 97 chr3R 14779050 intron jvl + chr3R 14779098 intron jvl + chr3R 14779147 intron jvl + chr3R_13_14775001 chr3R_14775001 RAL-513 1994 chr3R 14779085 14779091 chr3R 14779144 14779167 5 87 3.0 4.0 3.5 1.1 82 chr3R 14779085 intron jvl + chr3R 14779126 intron jvl + chr3R 14779167 intron jvl + chr3R_5_14775001 chr3R_14775001 RAL-513 1995 chr3R 14787116 14787131 chr3R 14787549 14787565 7 431 10.0 3.0 6.5 0.9 449 chr3R 14787116 intron jvl + chr3R 14787340 intron jvl + chr3R 14787565 intron jvl + chr3R_7_14785001 chr3R_14785001 RAL-513 1996 chr3R 14869716 14869722 chr3R 14869807 14869815 4 98 2.5 6.0 4.2 0.8 99 chr3R 14869716 intron btsz - chr3R 14869766 intron btsz - chr3R 14869815 intron btsz - chr3R_4_14865001 chr3R_14865001 RAL-513 1997 chr3R 14872529 14872572 chr3R 14872750 14872784 13 220 5.0 3.0 4.0 2.6 255 chr3R 14872529 intron btsz - chr3R 14872656 intron btsz - chr3R 14872784 intron btsz - chr3R_13_14870001 chr3R_14870001 RAL-513 1998 chr3R 14898461 14898498 chr3R 14898601 14898637 9 138 2.0 1.0 1.5 3.6 176 chr3R 14898461 intergenic Nup93-2 -,CG3817 + chr3R 14898549 intergenic Nup93-2 -,CG3817 + chr3R 14898637 intergenic CG3817 +,Nup93-2 - chr3R_9_14895001 chr3R_14895001 RAL-513 1999 chr3R 14959014 14959037 chr3R 14959211 14959212 9 198 5.0 0.5 2.8 2.4 198 chr3R 14959014 intergenic not near genes chr3R 14959113 intergenic not near genes chr3R 14959212 intergenic not near genes chr3R_9_14955001 chr3R_14955001 RAL-513 2000 chr3R 15009370 15009377 chr3R 15009456 15009484 8 102 6.0 6.0 6.0 1.1 114 chr3R 15009370 intergenic not near genes chr3R 15009427 intergenic not near genes chr3R 15009484 intergenic not near genes chr3R_8_15005001 chr3R_15005001 RAL-513 2001 chr3R 15041412 15041450 chr3R 15045200 15045238 Doc 8 3786 2.0 6.5 4.2 1.5 3826 chr3R 15041412 intergenic not near genes chr3R 15043325 intergenic not near genes chr3R 15045238 intergenic not near genes chr3R_8_15040001 chr3R_15040001 RAL-513 2002 chr3R 15058199 15058247 chr3R 15058304 15058352 8 103 3.0 2.5 2.8 2.1 153 chr3R 15058199 intron dpr9 - chr3R 15058276 intron dpr9 - chr3R 15058352 intron dpr9 - chr3R_8_15055001 chr3R_15055001 RAL-513 2003 chr3R 15059269 15059478 chr3R 15059471 15059585 BS 4 166 0.0 0.0 0.0 4.0 316 chr3R 15059269 intron dpr9 - chr3R 15059427 intron dpr9 - chr3R 15059585 intron dpr9 - chr3R_4_15055001 chr3R_15055001 RAL-513 2004 chr3R 15061025 15061034 chr3R 15061123 15061132 4 99 4.5 5.5 5.0 0.7 107 chr3R 15061025 intron dpr9 - chr3R 15061078 intron dpr9 - chr3R 15061132 intron dpr9 - chr3R_4_15060001 chr3R_15060001 RAL-513 2005 chr3R 15079793 15079829 chr3R 15080047 15080090 pogo 11 260 6.5 5.5 6.0 1.6 297 chr3R 15079793 3` UTR CG6966 - chr3R 15079942 3` UTR CG6966 - chr3R 15080090 3` UTR CG6966 - chr3R_11_15075001 chr3R_15075001 RAL-513 2006 chr3R 15102480 15102529 chr3R 15109757 15109804 412 8 7274 1.5 1.0 1.2 3.6 7324 chr3R 15102480 intron CG42788 - chr3R 15106142 intron CG42788 - chr3R 15109804 intron CG42788 - chr3R_8_15105001 chr3R_15105001 RAL-513 2007 chr3R 15132047 15132055 chr3R 15135127 15135135 Juan 6 3079 13.5 16.5 15.0 0.4 3088 chr3R 15132047 intergenic CG42788 - chr3R 15133591 intergenic not near genes chr3R 15135135 intergenic CG6912 - chr3R_6_15130001 chr3R_15130001 RAL-513 2008 chr3R 15132058 15132076 chr3R 15135119 15135156 Juan 11 3070 12.5 13.0 12.8 0.8 3098 chr3R 15132058 intergenic CG42788 - chr3R 15133607 intergenic not near genes chr3R 15135156 3` UTR CG6912 - chr3R_11_15130001 chr3R_15130001 RAL-513 2009 chr3R 15130875 15130898 chr3R 15141216 15141245 12 10344 22.0 23.5 22.8 0.5 10370 chr3R 15130875 intron CG42788 - chr3R 15136060 exon CG6912 - chr3R 15141245 exon CG3987 + chr3R_12_15135001 chr3R_15135001 RAL-513 2010 chr3R 15162524 15162560 chr3R 15167312 15167336 F-element 11 4785 7.5 3.0 5.2 1.8 4812 chr3R 15162524 intron Gyc88E + chr3R 15164930 intron Gyc88E + chr3R 15167336 intron Gyc88E + chr3R_11_15160001 chr3R_15160001 RAL-513 2011 chr3R 15190632 15190674 chr3R 15190776 15190787 8 135 1.5 2.0 1.8 2.9 155 chr3R 15190632 3` UTR Gyc88E + chr3R 15190710 3` UTR Gyc88E + chr3R 15190787 3` UTR Gyc88E + chr3R_8_15190001 chr3R_15190001 RAL-513 2012 chr3R 15286987 15286988 chr3R 21907534 21907536 8 6620547 16.0 18.5 17.2 0.4 6620549 chr3R 15286987 intron Tm1 + chr3R 18597262 intron,exon qin +,CG14304 - chr3R 21907536 intergenic CG6678 + chr3R_8_18595001 chr3R_18595001 RAL-513 2013 chr3R 15498542 15498575 chr3R 15498658 15498690 5 114 3.0 6.0 4.5 0.9 148 chr3R 15498542 intergenic not near genes chr3R 15498616 intergenic not near genes chr3R 15498690 intergenic not near genes chr3R_5_15495001 chr3R_15495001 RAL-513 2014 chr3R 15566407 15566440 chr3R 15566509 15566527 7 100 2.0 3.0 2.5 2.0 120 chr3R 15566407 intergenic not near genes chr3R 15566467 intergenic not near genes chr3R 15566527 intergenic not near genes chr3R_7_15565001 chr3R_15565001 RAL-513 2015 chr3R 15594656 15594675 chr3R 15594739 15594778 8 98 0.0 7.0 3.5 1.8 122 chr3R 15594656 intergenic not near genes chr3R 15594717 intergenic not near genes chr3R 15594778 intergenic not near genes chr3R_8_15590001 chr3R_15590001 RAL-513 2016 chr3R 15601150 15601196 chr3R 15608692 15608722 412 8 7540 5.5 7.0 6.2 1.1 7572 chr3R 15601150 intergenic not near genes chr3R 15604936 intergenic not near genes chr3R 15608722 intergenic not near genes chr3R_8_15600001 chr3R_15600001 RAL-513 2017 chr3R 15608775 15608821 chr3R 15609024 15609065 23 243 3.5 5.5 4.5 4.2 290 chr3R 15608775 intergenic not near genes chr3R 15608920 intergenic not near genes chr3R 15609065 intergenic not near genes chr3R_23_15605001 chr3R_15605001 RAL-513 2018 chr3R 15667991 15668044 chr3R 15668099 15668128 16 106 4.0 4.0 4.0 3.2 137 chr3R 15667991 intron,5` UTR pxb +,CR43849 + chr3R 15668060 intron,5` UTR pxb +,CR43849 + chr3R 15668128 intron,5` UTR pxb +,CR43849 + chr3R_16_15665001 chr3R_15665001 RAL-513 2019 chr3R 15676538 15676581 chr3R 15676634 15676635 12 91 2.5 4.0 3.2 2.9 97 chr3R 15676538 intron pxb + chr3R 15676586 intron pxb + chr3R 15676635 intron pxb + chr3R_12_15675001 chr3R_15675001 RAL-513 2020 chr3R 15702869 15702881 chr3R 15703079 15703091 4 210 0.0 8.0 4.0 0.8 222 chr3R 15702869 intergenic not near genes chr3R 15702980 intergenic not near genes chr3R 15703091 intergenic not near genes chr3R_4_15700001 chr3R_15700001 RAL-513 2021 chr3R 15715784 15715830 chr3R 15715889 15715899 15 101 2.0 4.0 3.0 3.8 115 chr3R 15715784 exon CG31294 - chr3R 15715842 intron CG31294 - chr3R 15715899 intron CG31294 - chr3R_15_15715001 chr3R_15715001 RAL-513 2022 chr3R 15743849 15743890 chr3R 15743981 15744021 12 131 10.5 4.5 7.5 1.4 172 chr3R 15743849 intergenic not near genes chr3R 15743935 intergenic not near genes chr3R 15744021 intergenic not near genes chr3R_12_15740001 chr3R_15740001 RAL-513 2023 chr3R 15790120 15790130 chr3R 15790247 15790258 4 128 26.5 15.0 20.8 0.2 138 chr3R 15790120 exon c(3)G - chr3R 15790189 intron c(3)G - chr3R 15790258 exon c(3)G - chr3R_4_15790001 chr3R_15790001 RAL-513 2024 chr3R 15790132 15790281 chr3R 15790246 15790403 20 127 11.0 15.0 13.0 1.4 271 chr3R 15790132 exon c(3)G - chr3R 15790268 exon c(3)G - chr3R 15790403 exon c(3)G - chr3R_20_15790001 chr3R_15790001 RAL-513 2025 chr3R 15790288 15790401 chr3R 15790579 15790627 11 231 17.5 26.5 22.0 0.5 339 chr3R 15790288 exon c(3)G - chr3R 15790458 exon c(3)G - chr3R 15790627 exon c(3)G - chr3R_11_15790001 chr3R_15790001 RAL-513 2026 chr3R 15790838 15790872 chr3R 15790953 15790985 10 122 21.0 26.0 23.5 0.4 147 chr3R 15790838 exon c(3)G - chr3R 15790912 intron c(3)G - chr3R 15790985 exon c(3)G - chr3R_10_15790001 chr3R_15790001 RAL-513 2027 chr3R 15811494 15811519 chr3R 15811749 15811780 13 257 5.0 6.5 5.8 1.9 286 chr3R 15811494 intron alpha-Man-IIb + chr3R 15811637 intron alpha-Man-IIb + chr3R 15811780 intron,3` UTR alpha-Man-IIb +,CR45211 - chr3R_13_15810001 chr3R_15810001 RAL-513 2028 chr3R 15991771 15991817 chr3R 15991993 15992036 14 230 35.0 29.5 32.2 0.4 265 chr3R 15991771 intron,intron srp +,CR44133 + chr3R 15991904 intron,intron srp +,CR44133 + chr3R 15992036 intron,intron srp +,CR44133 + chr3R_14_15990001 chr3R_15990001 RAL-513 2029 chr3R 15997951 15997994 chr3R 15998054 15998084 12 99 3.5 3.5 3.5 2.7 133 chr3R 15997951 intron srp + chr3R 15998018 intron srp + chr3R 15998084 intron srp + chr3R_12_15995001 chr3R_15995001 RAL-513 2030 chr3R 16033403 16033429 chr3R 16033504 16033530 8 101 3.5 3.0 3.2 1.9 127 chr3R 16033403 intron pnr + chr3R 16033466 intron pnr + chr3R 16033530 intron pnr + chr3R_8_16030001 chr3R_16030001 RAL-513 2031 chr3R 16048834 16048883 chr3R 16048940 16048989 6 101 1.0 4.5 2.8 1.6 155 chr3R 16048834 intron ird5 - chr3R 16048912 intron ird5 - chr3R 16048989 intron ird5 - chr3R_6_16045001 chr3R_16045001 RAL-513 2032 chr3R 16225069 16225114 chr3R 16225174 16225219 12 99 3.0 3.5 3.2 2.9 150 chr3R 16225069 intergenic not near genes chr3R 16225144 intergenic not near genes chr3R 16225219 intergenic tara + chr3R_12_16225001 chr3R_16225001 RAL-513 2033 chr3R 16246526 16246555 chr3R 16246622 16246650 4 95 0.0 6.5 3.2 1.0 124 chr3R 16246526 intron tara + chr3R 16246588 intron tara + chr3R 16246650 intron tara + chr3R_4_16245001 chr3R_16245001 RAL-513 2034 chr3R 16340336 16340384 chr3R 16340447 16340495 14 107 4.0 5.5 4.8 2.4 159 chr3R 16340336 3` UTR SF2 - chr3R 16340416 3` UTR SF2 - chr3R 16340495 3` UTR SF2 - chr3R_14_16340001 chr3R_16340001 RAL-513 2035 chr3R 16633679 16633682 chr3R 16633797 16633802 5 119 9.5 9.5 9.5 0.5 123 chr3R 16633679 intron Fas1 + chr3R 16633740 intron Fas1 + chr3R 16633802 intron Fas1 + chr3R_5_16630001 chr3R_16630001 RAL-513 2036 chr3R 16731910 16731940 chr3R 16732011 16732038 5 97 5.0 3.5 4.2 1.0 128 chr3R 16731910 intron Ubx - chr3R 16731974 intron Ubx - chr3R 16732038 intron Ubx - chr3R_5_16730001 chr3R_16730001 RAL-513 2037 chr3R 16734859 16734878 chr3R 16734962 16734981 4 103 0.0 1.0 0.5 2.7 122 chr3R 16734859 intergenic Ubx - chr3R 16734920 intergenic Ubx - chr3R 16734981 intergenic not near genes chr3R_4_16730001 chr3R_16730001 RAL-513 2038 chr3R 16771599 16771640 chr3R 16771690 16771732 8 93 6.0 2.5 4.2 1.5 133 chr3R 16771599 intron bxd - chr3R 16771666 intron bxd - chr3R 16771732 intron bxd - chr3R_8_16770001 chr3R_16770001 RAL-513 2039 chr3R 16853100 16853147 chr3R 16853552 16853609 14 456 4.0 2.5 3.2 3.3 509 chr3R 16853100 intron,intron iab-8 -,iab-4 + chr3R 16853354 intron,intron iab-8 -,iab-4 + chr3R 16853609 intron,intron iab-8 -,iab-4 + chr3R_14_16850001 chr3R_16850001 RAL-513 2040 chr3R 16860325 16860362 chr3R 16860422 16860460 6 98 2.5 0.5 1.5 2.4 135 chr3R 16860325 intron iab-8 - chr3R 16860392 intron iab-8 - chr3R 16860460 intron iab-8 - chr3R_6_16860001 chr3R_16860001 RAL-513 2041 chr3R 16864244 16864266 chr3R 16864673 16864689 6 431 5.0 1.5 3.2 1.4 445 chr3R 16864244 intron iab-8 - chr3R 16864466 intron iab-8 - chr3R 16864689 intron iab-8 - chr3R_6_16860001 chr3R_16860001 RAL-513 2042 chr3R 16889953 16889991 chr3R 16890038 16890069 10 90 0.5 3.0 1.8 3.6 116 chr3R 16889953 intron iab-8 - chr3R 16890011 intron iab-8 - chr3R 16890069 intron iab-8 - chr3R_10_16890001 chr3R_16890001 RAL-513 2043 chr3R 16902659 16902708 chr3R 16902762 16902792 8 96 2.0 5.5 3.8 1.7 133 chr3R 16902659 intron iab-8 - chr3R 16902726 intron iab-8 - chr3R 16902792 intron iab-8 - chr3R_8_16900001 chr3R_16900001 RAL-513 2044 chr3R 16914444 16914470 chr3R 16914576 16914602 6 129 22.5 29.0 25.8 0.2 158 chr3R 16914444 intron iab-8 - chr3R 16914523 intron iab-8 - chr3R 16914602 intron iab-8 - chr3R_6_16910001 chr3R_16910001 RAL-513 2045 chr3R 17077741 17077771 chr3R 17077900 17077930 10 157 3.0 2.5 2.8 2.6 189 chr3R 17077741 intron Keap1 - chr3R 17077836 intron Keap1 - chr3R 17077930 intron Keap1 - chr3R_10_17075001 chr3R_17075001 RAL-513 2046 chr3R 17120485 17120528 chr3R 17120725 17120761 10 239 4.5 5.0 4.8 1.7 276 chr3R 17120485 intron,exon cher -,CG34278 + chr3R 17120623 intron,exon cher -,CG34278 + chr3R 17120761 intron,3` UTR cher -,CG34278 + chr3R_10_17120001 chr3R_17120001 RAL-513 2047 chr3R 17128578 17128605 chr3R 17128657 17128699 4 80 3.5 5.5 4.5 0.7 121 chr3R 17128578 exon CG31265 + chr3R 17128638 exon CG31265 + chr3R 17128699 exon CG31265 + chr3R_4_17125001 chr3R_17125001 RAL-513 2048 chr3R 17175925 17175977 chr3R 17176024 17176076 15 95 5.0 5.5 5.2 2.4 151 chr3R 17175925 intron Mur89F - chr3R 17176000 intron Mur89F - chr3R 17176076 intron Mur89F - chr3R_15_17175001 chr3R_17175001 RAL-513 2049 chr3R 17184723 17184744 chr3R 17184819 17184828 7 94 1.5 3.0 2.2 2.2 105 chr3R 17184723 intron Mur89F - chr3R 17184776 intron Mur89F - chr3R 17184828 intron Mur89F - chr3R_7_17180001 chr3R_17180001 RAL-513 2050 chr3R 17184750 17184755 chr3R 17184816 17184849 4 88 1.0 3.0 2.0 1.3 99 chr3R 17184750 intron Mur89F - chr3R 17184800 intron Mur89F - chr3R 17184849 intron Mur89F - chr3R_4_17180001 chr3R_17180001 RAL-513 2051 chr3R 17225996 17226047 chr3R 17226115 17226149 10 113 1.5 5.5 3.5 2.2 153 chr3R 17225996 intergenic not near genes chr3R 17226072 intergenic not near genes chr3R 17226149 intergenic not near genes chr3R_10_17225001 chr3R_17225001 RAL-513 2052 chr3R 17250214 17250262 chr3R 17250371 17250411 11 156 4.0 6.5 5.2 1.8 197 chr3R 17250214 intron beat-IIb - chr3R 17250312 intron beat-IIb - chr3R 17250411 intron beat-IIb - chr3R_11_17250001 chr3R_17250001 RAL-513 2053 chr3R 17299434 17299464 chr3R 17299726 17299746 11 293 2.0 6.0 4.0 2.2 312 chr3R 17299434 intergenic not near genes chr3R 17299590 intergenic not near genes chr3R 17299746 intergenic not near genes chr3R_11_17295001 chr3R_17295001 RAL-513 2054 chr3R 17346675 17346711 chr3R 17348257 17348257 F-element 8 1576 1.0 4.5 2.8 2.1 1582 chr3R 17346675 intron beat-IIa - chr3R 17347466 intron beat-IIa - chr3R 17348257 intron beat-IIa - chr3R_8_17345001 chr3R_17345001 RAL-513 2055 chr3R 17420934 17420985 chr3R 17425521 17425549 6 4579 16.0 24.0 20.0 0.3 4615 chr3R 17420934 exon CG42835 + chr3R 17423242 intergenic not near genes chr3R 17425549 intergenic CG5873 + chr3R_6_17420001 chr3R_17420001 RAL-513 2056 chr3R 17461187 17461232 chr3R 17461282 17461334 13 97 4.0 4.0 4.0 2.6 147 chr3R 17461187 intergenic not near genes chr3R 17461260 intergenic not near genes chr3R 17461334 intergenic not near genes chr3R_13_17460001 chr3R_17460001 RAL-513 2057 chr3R 17521571 17521579 chr3R 17521721 17521744 5 162 0.0 5.0 2.5 1.4 173 chr3R 17521571 intergenic not near genes chr3R 17521658 intergenic not near genes chr3R 17521744 intergenic not near genes chr3R_5_17520001 chr3R_17520001 RAL-513 2058 chr3R 17591289 17591327 chr3R 17591718 17591735 F-element 6 433 2.5 1.5 2.0 2.0 446 chr3R 17591289 intergenic not near genes chr3R 17591512 intergenic not near genes chr3R 17591735 intergenic not near genes chr3R_6_17590001 chr3R_17590001 RAL-513 2059 chr3R 17645683 17645722 chr3R 17645832 17645854 12 143 4.0 4.5 4.2 2.3 171 chr3R 17645683 intergenic CG43175 + chr3R 17645768 intergenic not near genes chr3R 17645854 intergenic not near genes chr3R_12_17645001 chr3R_17645001 RAL-513 2060 chr3R 17653062 17653114 chr3R 17653171 17653204 10 97 4.5 7.5 6.0 1.4 142 chr3R 17653062 intron,intron CG14322 +,CR45223 - chr3R 17653133 intron,intron CG14322 +,CR45223 - chr3R 17653204 intron,intron CG14322 +,CR45223 - chr3R_10_17650001 chr3R_17650001 RAL-513 2061 chr3R 17658442 17658469 chr3R 17658647 17658672 5 204 6.5 7.0 6.8 0.6 230 chr3R 17658442 intron CG14322 + chr3R 17658557 intron CG14322 + chr3R 17658672 intron CG14322 + chr3R_5_17655001 chr3R_17655001 RAL-513 2062 chr3R 17658472 17658490 chr3R 17658646 17658672 6 196 3.5 7.0 5.2 1.0 200 chr3R 17658472 intron CG14322 + chr3R 17658572 intron CG14322 + chr3R 17658672 intron CG14322 + chr3R_6_17655001 chr3R_17655001 RAL-513 2063 chr3R 17734108 17734137 chr3R 17734215 17734246 5 108 4.5 4.0 4.2 1.0 138 chr3R 17734108 3` UTR CG14321 + chr3R 17734177 3` UTR CG14321 + chr3R 17734246 3` UTR CG14321 + chr3R_5_17730001 chr3R_17730001 RAL-513 2064 chr3R 17734835 17734860 chr3R 17734969 17734994 5 134 2.0 1.0 1.5 2.0 159 chr3R 17734835 intergenic CG14321 + chr3R 17734914 intergenic not near genes chr3R 17734994 intergenic not near genes chr3R_5_17730001 chr3R_17730001 RAL-513 2065 chr3R 17773378 17773390 chr3R 17773478 17773488 4 99 5.0 4.5 4.8 0.7 110 chr3R 17773378 intron CG43102 - chr3R 17773433 intron CG43102 - chr3R 17773488 exon CG43102 - chr3R_4_17770001 chr3R_17770001 RAL-513 2066 chr3R 17817074 17817094 chr3R 17817215 17817234 5 141 2.0 3.0 2.5 1.4 160 chr3R 17817074 intron tinc + chr3R 17817154 intron tinc + chr3R 17817234 intron tinc + chr3R_5_17815001 chr3R_17815001 RAL-513 2067 chr3R 17823205 17823232 chr3R 17823309 17823324 4 102 1.5 2.5 2.0 1.3 119 chr3R 17823205 intron tinc + chr3R 17823264 intron tinc + chr3R 17823324 intron tinc + chr3R_4_17820001 chr3R_17820001 RAL-513 2068 chr3R 17845103 17845216 chr3R 17845211 17845313 7 95 1.0 1.0 1.0 3.5 210 chr3R 17845103 intron tinc + chr3R 17845208 intron tinc + chr3R 17845313 intron tinc + chr3R_7_17845001 chr3R_17845001 RAL-513 2069 chr3R 17899070 17899116 chr3R 17899168 17899184 5 83 1.0 4.0 2.5 1.4 114 chr3R 17899070 intron Rim - chr3R 17899127 intron Rim - chr3R 17899184 intron Rim - chr3R_5_17895001 chr3R_17895001 RAL-513 2070 chr3R 17925861 17925884 chr3R 17927325 17927346 hobo 8 1473 7.5 7.0 7.2 1.0 1485 chr3R 17925861 intron cpo + chr3R 17926604 intron cpo + chr3R 17927346 intron cpo + chr3R_8_17925001 chr3R_17925001 RAL-513 2071 chr3R 17964206 17964248 chr3R 17964332 17964373 10 118 6.5 3.0 4.8 1.7 167 chr3R 17964206 intron cpo + chr3R 17964290 intron cpo + chr3R 17964373 intron cpo + chr3R_10_17960001 chr3R_17960001 RAL-513 2072 chr3R 17995832 17995862 chr3R 17995943 17995943 5 101 1.5 5.0 3.2 1.2 111 chr3R 17995832 intron cpo + chr3R 17995888 intron cpo + chr3R 17995943 intron cpo + chr3R_5_17995001 chr3R_17995001 RAL-513 2073 chr3R 18025323 18025360 chr3R 18025424 18025461 10 100 5.5 5.5 5.5 1.5 138 chr3R 18025323 3` UTR CG7794 + chr3R 18025392 intergenic CG7794 + chr3R 18025461 intergenic CG7794 + chr3R_10_18025001 chr3R_18025001 RAL-513 2074 chr3R 18107121 18107139 chr3R 18107224 18107242 6 101 0.0 5.0 2.5 1.7 121 chr3R 18107121 intron sr + chr3R 18107182 intron sr + chr3R 18107242 intron sr + chr3R_6_18105001 chr3R_18105001 RAL-513 2075 chr3R 18136231 18136257 chr3R 18136350 18136381 5 129 1.0 2.0 1.5 2.0 150 chr3R 18136231 intergenic not near genes chr3R 18136306 intergenic not near genes chr3R 18136381 intergenic not near genes chr3R_5_18135001 chr3R_18135001 RAL-513 2076 chr3R 18379618 18379625 chr3R 18379944 18379951 6 325 7.5 8.5 8.0 0.7 333 chr3R 18379618 intron CG7675 - chr3R 18379784 intron CG7675 - chr3R 18379951 intron CG7675 - chr3R_6_18375001 chr3R_18375001 RAL-513 2077 chr3R 18379631 18379659 chr3R 18379942 18379982 7 318 3.0 8.0 5.5 1.1 351 chr3R 18379631 intron CG7675 - chr3R 18379806 intron CG7675 - chr3R 18379982 intron CG7675 - chr3R_7_18375001 chr3R_18375001 RAL-513 2078 chr3R 18394455 18394495 chr3R 18394552 18394592 8 92 8.0 5.0 6.5 1.1 137 chr3R 18394455 intron Vha100-2 - chr3R 18394524 intron Vha100-2 - chr3R 18394592 intron Vha100-2 - chr3R_8_18390001 chr3R_18390001 RAL-513 2079 chr3R 18464291 18464339 chr3R 18464449 18464498 5 148 0.0 2.0 1.0 2.5 207 chr3R 18464291 intron fru - chr3R 18464394 intron fru - chr3R 18464498 intron fru - chr3R_5_18460001 chr3R_18460001 RAL-513 2080 chr3R 18472288 18472296 chr3R 18472409 18472417 7 121 4.0 2.5 3.2 1.7 129 chr3R 18472288 intron fru - chr3R 18472352 intron fru - chr3R 18472417 intron fru - chr3R_7_18470001 chr3R_18470001 RAL-513 2081 chr3R 18501591 18501623 chr3R 18501673 18501724 7 97 4.0 2.0 3.0 1.8 133 chr3R 18501591 intron fru - chr3R 18501658 intron fru - chr3R 18501724 intron fru - chr3R_7_18500001 chr3R_18500001 RAL-513 2082 chr3R 18537233 18537245 chr3R 18537336 18537337 6 101 5.5 6.0 5.8 0.9 104 chr3R 18537233 intron fru - chr3R 18537285 intron fru - chr3R 18537337 intron fru - chr3R_6_18535001 chr3R_18535001 RAL-513 2083 chr3R 18537250 18537266 chr3R 18537324 18537370 8 92 3.0 5.5 4.2 1.5 120 chr3R 18537250 intron fru - chr3R 18537310 intron fru - chr3R 18537370 intron fru - chr3R_8_18535001 chr3R_18535001 RAL-513 2084 chr3R 18606515 18606531 chr3R 18610741 18610783 F-element 6 4244 3.5 3.0 3.2 1.4 4268 chr3R 18606515 intron,intron qin +,CG14304 - chr3R 18608649 intron,intron qin +,CG14304 - chr3R 18610783 intron,intron qin +,CG14304 - chr3R_6_18605001 chr3R_18605001 RAL-513 2085 chr3R 18615360 18615383 chr3R 18615466 18615492 5 104 4.5 2.5 3.5 1.1 132 chr3R 18615360 intron,intron qin +,CG14304 - chr3R 18615426 intron,intron qin +,CG14304 - chr3R 18615492 intron,intron qin +,CG14304 - chr3R_5_18615001 chr3R_18615001 RAL-513 2086 chr3R 18615385 18615392 chr3R 18615464 18615487 4 98 4.5 2.5 3.5 0.9 102 chr3R 18615385 intron,intron qin +,CG14304 - chr3R 18615436 intron,intron qin +,CG14304 - chr3R 18615487 intron,intron qin +,CG14304 - chr3R_4_18615001 chr3R_18615001 RAL-513 2087 chr3R 18630505 18630543 chr3R 18630673 18630699 5 175 4.0 6.0 5.0 0.8 194 chr3R 18630505 intron,intron qin +,CG14301 - chr3R 18630602 intron,intron qin +,CG14301 - chr3R 18630699 intron,intron qin +,CG14301 - chr3R_5_18630001 chr3R_18630001 RAL-513 2088 chr3R 18695741 18695752 chr3R 18695844 18695855 5 103 6.0 0.0 3.0 1.2 114 chr3R 18695741 3` UTR CG34282 + chr3R 18695798 intergenic CG34282 + chr3R 18695855 intergenic CG34282 + chr3R_5_18695001 chr3R_18695001 RAL-513 2089 chr3R 18781697 18781718 chr3R 18781767 18781799 4 78 5.5 3.5 4.5 0.7 102 chr3R 18781697 intron CG7720 - chr3R 18781748 intron CG7720 - chr3R 18781799 intron CG7720 - chr3R_4_18780001 chr3R_18780001 RAL-513 2090 chr3R 18808476 18808504 chr3R 18808552 18808562 5 75 1.5 4.5 3.0 1.2 86 chr3R 18808476 intron CG18208 - chr3R 18808519 intron CG18208 - chr3R 18808562 intron CG18208 - chr3R_5_18805001 chr3R_18805001 RAL-513 2091 chr3R 18812061 18812106 chr3R 18812159 18812203 15 91 3.0 5.5 4.2 2.9 142 chr3R 18812061 intron CG18208 - chr3R 18812132 intron CG18208 - chr3R 18812203 intron CG18208 - chr3R_15_18810001 chr3R_18810001 RAL-513 2092 chr3R 18817551 18817573 chr3R 18817995 18817995 4 438 5.0 0.5 2.8 1.1 444 chr3R 18817551 intron CG18208 - chr3R 18817773 intron CG18208 - chr3R 18817995 intron CG18208 - chr3R_4_18815001 chr3R_18815001 RAL-513 2093 chr3R 18830059 18830082 chr3R 18830214 18830240 7 157 6.0 9.0 7.5 0.8 181 chr3R 18830059 intron CG18208 - chr3R 18830150 intron CG18208 - chr3R 18830240 intron CG18208 - chr3R_7_18830001 chr3R_18830001 RAL-513 2094 chr3R 18856339 18856372 chr3R 18856624 18856648 10 290 3.0 4.5 3.8 2.1 309 chr3R 18856339 intergenic not near genes chr3R 18856494 intergenic not near genes chr3R 18856648 intergenic not near genes chr3R_10_18855001 chr3R_18855001 RAL-513 2095 chr3R 18890065 18890084 chr3R 18890141 18890178 6 89 3.0 5.0 4.0 1.2 113 chr3R 18890065 intergenic not near genes chr3R 18890122 intergenic not near genes chr3R 18890178 intergenic not near genes chr3R_6_18890001 chr3R_18890001 RAL-513 2096 chr3R 19013000 19013046 chr3R 19013104 19013150 10 100 4.5 3.0 3.8 2.1 150 chr3R 19013000 intron gukh + chr3R 19013075 intron gukh + chr3R 19013150 intron gukh + chr3R_10_19010001 chr3R_19010001 RAL-513 2097 chr3R 19077654 19077705 chr3R 19077790 19077842 10 129 4.0 3.0 3.5 2.2 188 chr3R 19077654 intron cdi - chr3R 19077748 intron cdi - chr3R 19077842 intron cdi - chr3R_10_19075001 chr3R_19075001 RAL-513 2098 chr3R 19140244 19140275 chr3R 19140712 19140718 6 462 5.0 2.5 3.8 1.2 474 chr3R 19140244 3` UTR Ppcs - chr3R 19140481 3` UTR Ppcs - chr3R 19140718 3` UTR Ppcs - chr3R_6_19140001 chr3R_19140001 RAL-513 2099 chr3R 19274304 19274341 chr3R 19274408 19274413 7 94 0.0 1.0 0.5 4.7 109 chr3R 19274304 intergenic not near genes chr3R 19274358 intergenic not near genes chr3R 19274413 intergenic not near genes chr3R_7_19270001 chr3R_19270001 RAL-513 2100 chr3R 19344664 19344698 chr3R 19344803 19344853 5 152 2.5 1.5 2.0 1.7 189 chr3R 19344664 intergenic not near genes chr3R 19344758 intergenic not near genes chr3R 19344853 intergenic not near genes chr3R_5_19340001 chr3R_19340001 RAL-513 2101 chr3R 19364435 19364452 chr3R 19364586 19364618 8 165 3.5 4.0 3.8 1.7 183 chr3R 19364435 intergenic not near genes chr3R 19364526 intergenic not near genes chr3R 19364618 intergenic not near genes chr3R_8_19360001 chr3R_19360001 RAL-513 2102 chr3R 19407733 19407780 chr3R 19408248 19408273 14 512 2.0 3.0 2.5 4.0 540 chr3R 19407733 intergenic not near genes chr3R 19408003 intergenic not near genes chr3R 19408273 intergenic not near genes chr3R_14_19405001 chr3R_19405001 RAL-513 2103 chr3R 19418397 19418424 chr3R 19418509 19418536 7 112 6.0 0.5 3.2 1.7 139 chr3R 19418397 intron CG31221 + chr3R 19418466 intron CG31221 + chr3R 19418536 intron CG31221 + chr3R_7_19415001 chr3R_19415001 RAL-513 2104 chr3R 19602745 19602782 chr3R 19602843 19602879 9 96 2.5 3.5 3.0 2.2 134 chr3R 19602745 intergenic CG7333 + chr3R 19602812 intergenic CG7333 + chr3R 19602879 intergenic CG7333 +,CG7342 + chr3R_9_19600001 chr3R_19600001 RAL-513 2105 chr3R 19702300 19702355 chr3R 19702402 19702454 19 100 5.5 0.5 3.0 4.8 154 chr3R 19702300 intergenic not near genes chr3R 19702377 intergenic not near genes chr3R 19702454 intergenic not near genes chr3R_19_19700001 chr3R_19700001 RAL-513 2106 chr3R 19716219 19716245 chr3R 19716294 19716317 9 86 0.0 0.0 0.0 9.0 98 chr3R 19716219 intergenic CG34286 - chr3R 19716268 intergenic CG34286 - chr3R 19716317 intergenic CG34286 - chr3R_9_19715001 chr3R_19715001 RAL-513 2107 chr3R 19720396 19720446 chr3R 19720553 19720604 17 155 7.0 4.0 5.5 2.6 208 chr3R 19720396 intergenic not near genes chr3R 19720500 intergenic not near genes chr3R 19720604 intergenic not near genes chr3R_17_19720001 chr3R_19720001 RAL-513 2108 chr3R 19824491 19824541 chr3R 19824604 19824633 8 109 3.5 4.5 4.0 1.6 142 chr3R 19824491 intron bnl - chr3R 19824562 intron bnl - chr3R 19824633 intron bnl - chr3R_8_19820001 chr3R_19820001 RAL-513 2109 chr3R 19846944 19846994 chr3R 19847123 19847151 4 174 1.5 0.5 1.0 2.0 207 chr3R 19846944 intergenic CG4662 + chr3R 19847048 intergenic CG4662 + chr3R 19847151 intergenic CG4662 + chr3R_4_19845001 chr3R_19845001 RAL-513 2110 chr3R 19866111 19866146 chr3R 19866367 19866411 13 261 5.5 3.5 4.5 2.4 300 chr3R 19866111 intron,3` UTR CG4686 +,CG4562 - chr3R 19866261 intron,3` UTR CG4686 +,CG4562 - chr3R 19866411 intron,3` UTR CG4686 +,CG4562 - chr3R_13_19865001 chr3R_19865001 RAL-513 2111 chr3R 19908298 19908302 chr3R 19908388 19908405 4 100 0.0 7.0 3.5 0.9 107 chr3R 19908298 intron RhoGAP92B + chr3R 19908352 intron RhoGAP92B + chr3R 19908405 intron,3` UTR RhoGAP92B +,CR45048 - chr3R_4_19905001 chr3R_19905001 RAL-513 2112 chr3R 20008805 20008855 chr3R 20008906 20008956 9 100 3.5 4.5 4.0 1.8 151 chr3R 20008805 intergenic MED25 +,Hs6st - chr3R 20008880 intergenic MED25 +,Hs6st - chr3R 20008956 5` UTR MED25 + chr3R_9_20005001 chr3R_20005001 RAL-513 2113 chr3R 20059450 20059493 chr3R 20059549 20059589 12 96 5.0 8.0 6.5 1.6 139 chr3R 20059450 intron CG4390 - chr3R 20059520 intron CG4390 - chr3R 20059589 exon CG4390 - chr3R_12_20055001 chr3R_20055001 RAL-513 2114 chr3R 20077018 20077066 chr3R 20077123 20077172 6 104 0.5 2.5 1.5 2.4 154 chr3R 20077018 intergenic not near genes chr3R 20077095 intergenic not near genes chr3R 20077172 intergenic not near genes chr3R_6_20075001 chr3R_20075001 RAL-513 2115 chr3R 20109546 20109556 chr3R 20114772 20114782 copia 4 5226 3.0 8.0 5.5 0.6 5236 chr3R 20109546 intergenic not near genes chr3R 20112164 intergenic not near genes chr3R 20114782 intergenic CG10887 + chr3R_4_20110001 chr3R_20110001 RAL-513 2116 chr3R 20156683 20156715 chr3R 20165864 20165905 roo 15 9182 5.0 4.5 4.8 2.6 9222 chr3R 20156683 intergenic not near genes chr3R 20161294 intergenic not near genes chr3R 20165905 intergenic not near genes chr3R_15_20160001 chr3R_20160001 RAL-513 2117 chr3R 20245279 20245306 chr3R 20248905 20248936 F-element 5 3629 3.0 0.5 1.8 1.8 3657 chr3R 20245279 3` UTR Nlg4 + chr3R 20247108 intergenic not near genes chr3R 20248936 intergenic not near genes chr3R_5_20245001 chr3R_20245001 RAL-513 2118 chr3R 20266510 20266544 chr3R 20273001 20273031 Burdock 14 6485 5.5 4.0 4.8 2.4 6521 chr3R 20266510 intron cic + chr3R 20269770 intron cic + chr3R 20273031 intron cic + chr3R_14_20265001 chr3R_20265001 RAL-513 2119 chr3R 20282289 20282306 chr3R 20282385 20282402 5 96 2.0 6.5 4.2 1.0 113 chr3R 20282289 intron cic + chr3R 20282346 intron cic + chr3R 20282402 intron cic + chr3R_5_20280001 chr3R_20280001 RAL-513 2120 chr3R 20308171 20308211 chr3R 20308276 20308329 5 109 1.5 0.0 0.8 2.8 158 chr3R 20308171 intergenic not near genes chr3R 20308250 intergenic not near genes chr3R 20308329 intergenic not near genes chr3R_5_20305001 chr3R_20305001 RAL-513 2121 chr3R 20330983 20331027 chr3R 20331489 20331499 roo 6 500 1.5 4.5 3.0 1.5 516 chr3R 20330983 intergenic Sirt2 + chr3R 20331241 intergenic Sirt2 + chr3R 20331499 intergenic not near genes chr3R_6_20330001 chr3R_20330001 RAL-513 2122 chr3R 20345360 20345395 chr3R 20345469 20345503 6 109 0.0 3.0 1.5 2.4 143 chr3R 20345360 intergenic not near genes chr3R 20345432 intergenic not near genes chr3R 20345503 intergenic not near genes chr3R_6_20345001 chr3R_20345001 RAL-513 2123 chr3R 20434826 20434864 chr3R 20435030 20435069 6 205 3.5 1.0 2.2 1.9 243 chr3R 20434826 intron Gfrl - chr3R 20434948 intron Gfrl - chr3R 20435069 intron Gfrl - chr3R_6_20430001 chr3R_20430001 RAL-513 2124 chr3R 20460093 20460114 chr3R 20460209 20460223 4 116 1.0 1.0 1.0 2.0 130 chr3R 20460093 intron Gfrl - chr3R 20460158 intron Gfrl - chr3R 20460223 intron Gfrl - chr3R_4_20460001 chr3R_20460001 RAL-513 2125 chr3R 20489003 20489019 chr3R 20489099 20489112 5 95 3.5 2.0 2.8 1.3 109 chr3R 20489003 intergenic not near genes chr3R 20489058 intergenic not near genes chr3R 20489112 intergenic not near genes chr3R_5_20485001 chr3R_20485001 RAL-513 2126 chr3R 20489025 20489045 chr3R 20489091 20489141 5 87 2.0 2.0 2.0 1.7 116 chr3R 20489025 intergenic not near genes chr3R 20489083 intergenic not near genes chr3R 20489141 intergenic not near genes chr3R_5_20485001 chr3R_20485001 RAL-513 2127 chr3R 20512344 20512367 chr3R 20512429 20512435 6 78 7.0 5.0 6.0 0.9 91 chr3R 20512344 5` UTR CG4288 - chr3R 20512390 5` UTR CG4288 - chr3R 20512435 5` UTR CG4288 - chr3R_6_20510001 chr3R_20510001 RAL-513 2128 chr3R 20513007 20513014 chr3R 20515730 20515737 opus 4 2723 4.5 3.0 3.8 0.8 2730 chr3R 20513007 intergenic not near genes chr3R 20514372 intergenic not near genes chr3R 20515737 intergenic not near genes chr3R_4_20510001 chr3R_20510001 RAL-513 2129 chr3R 20592768 20592811 chr3R 20592884 20592898 5 110 0.0 1.5 0.8 2.8 130 chr3R 20592768 intergenic CG4159 -,bon + chr3R 20592833 intergenic CG4159 -,bon + chr3R 20592898 intergenic CG4159 -,bon + chr3R_5_20590001 chr3R_20590001 RAL-513 2130 chr3R 20687240 20687286 chr3R 20687336 20687380 10 93 4.5 3.0 3.8 2.1 140 chr3R 20687240 intergenic not near genes chr3R 20687310 intergenic not near genes chr3R 20687380 intergenic not near genes chr3R_10_20685001 chr3R_20685001 RAL-513 2131 chr3R 20730917 20731060 chr3R 20731037 20731158 12 109 0.0 0.0 0.0 12.0 241 chr3R 20730917 intergenic not near genes chr3R 20731038 intergenic not near genes chr3R 20731158 intergenic CG31205 + chr3R_12_20730001 chr3R_20730001 RAL-513 2132 chr3R 20771711 20771730 chr3R 20771781 20771800 12 93 0.0 5.5 2.8 3.2 89 chr3R 20771711 intron,intron Syp +,Takl1 - chr3R 20771756 intron,intron Syp +,Takl1 - chr3R 20771800 intron,exon Syp +,Takl1 - chr3R_12_20770001 chr3R_20770001 RAL-513 2133 chr3R 20787422 20787440 chr3R 20787533 20787534 4 107 7.0 3.0 5.0 0.7 112 chr3R 20787422 intron Syp + chr3R 20787478 intron Syp + chr3R 20787534 intron Syp + chr3R_4_20785001 chr3R_20785001 RAL-513 2134 chr3R 20804914 20804958 chr3R 20805034 20805074 20 108 9.0 6.5 7.8 2.3 160 chr3R 20804914 intron Syp + chr3R 20804994 intron Syp + chr3R 20805074 intron Syp + chr3R_20_20800001 chr3R_20800001 RAL-513 2135 chr3R 20854476 20854520 chr3R 20859267 20859285 Doc 9 4784 0.5 2.5 1.5 3.6 4809 chr3R 20854476 intron Ir93a - chr3R 20856880 intron Ir93a - chr3R 20859285 exon Ir93a - chr3R_9_20855001 chr3R_20855001 RAL-513 2136 chr3R 20870244 20870283 chr3R 20870349 20870388 11 99 3.0 4.5 3.8 2.3 144 chr3R 20870244 intergenic not near genes chr3R 20870316 intergenic not near genes chr3R 20870388 intergenic not near genes chr3R_11_20870001 chr3R_20870001 RAL-513 2137 chr3R 20901325 20901373 chr3R 20901428 20901479 15 94 3.5 6.0 4.8 2.6 154 chr3R 20901325 intergenic not near genes chr3R 20901402 intergenic not near genes chr3R 20901479 intergenic CG5621 + chr3R_15_20900001 chr3R_20900001 RAL-513 2138 chr3R 20942813 20942842 chr3R 20942887 20942908 10 87 5.5 2.5 4.0 2.0 95 chr3R 20942813 intron CG31191 - chr3R 20942860 intron CG31191 - chr3R 20942908 intron CG31191 - chr3R_10_20940001 chr3R_20940001 RAL-513 2139 chr3R 20999949 20999993 chr3R 21000394 21000439 10 436 2.0 4.0 3.0 2.5 490 chr3R 20999949 intron Calx + chr3R 21000194 intron Calx + chr3R 21000439 intron Calx + chr3R_10_21000001 chr3R_21000001 RAL-513 2140 chr3R 21108021 21108062 chr3R 21108302 21108318 8 277 2.0 2.5 2.2 2.5 297 chr3R 21108021 intergenic Sec15 -,rtet + chr3R 21108170 intergenic Sec15 -,rtet + chr3R 21108318 intergenic rtet +,Sec15 - chr3R_8_21105001 chr3R_21105001 RAL-513 2141 chr3R 21141678 21141694 chr3R 21150154 21150173 Tirant 4 8475 4.5 2.5 3.5 0.9 8495 chr3R 21141678 intron SNF4Agamma + chr3R 21145926 intron SNF4Agamma + chr3R 21150173 intron SNF4Agamma + chr3R_4_21145001 chr3R_21145001 RAL-513 2142 chr3R 21252698 21252723 chr3R 21252794 21252816 10 103 1.5 3.5 2.5 2.9 118 chr3R 21252698 intron ETHR + chr3R 21252757 intron ETHR + chr3R 21252816 intron ETHR + chr3R_10_21250001 chr3R_21250001 RAL-513 2143 chr3R 21322954 21322988 chr3R 21323052 21323073 8 94 3.0 1.5 2.2 2.5 119 chr3R 21322954 exon CG16791 - chr3R 21323014 intron CG16791 - chr3R 21323073 intron CG16791 - chr3R_8_21320001 chr3R_21320001 RAL-513 2144 chr3R 21464386 21464422 chr3R 21464492 21464526 7 106 2.5 2.5 2.5 2.0 140 chr3R 21464386 intergenic not near genes chr3R 21464456 intergenic not near genes chr3R 21464526 intergenic not near genes chr3R_7_21460001 chr3R_21460001 RAL-513 2145 chr3R 21471996 21472034 chr3R 21472097 21472134 7 98 5.5 3.5 4.5 1.3 138 chr3R 21471996 intergenic not near genes chr3R 21472065 intergenic not near genes chr3R 21472134 intergenic not near genes chr3R_7_21470001 chr3R_21470001 RAL-513 2146 chr3R 21505202 21505254 chr3R 21505304 21505355 11 90 2.5 3.0 2.8 2.9 153 chr3R 21505202 intron C15 + chr3R 21505278 intron C15 + chr3R 21505355 intron C15 + chr3R_11_21505001 chr3R_21505001 RAL-513 2147 chr3R 21519974 21520133 chr3R 21520095 21520247 12 116 1.5 1.5 1.5 4.8 273 chr3R 21519974 intergenic not near genes chr3R 21520110 intergenic not near genes chr3R 21520247 intergenic not near genes chr3R_12_21520001 chr3R_21520001 RAL-513 2148 chr3R 21532761 21532863 chr3R 21532861 21532967 4 101 0.0 0.0 0.0 4.0 206 chr3R 21532761 3` UTR CR43372 - chr3R 21532864 intron CR43372 - chr3R 21532967 3` UTR CR43372 - chr3R_4_21530001 chr3R_21530001 RAL-513 2149 chr3R 21761104 21761152 chr3R 21768513 21768542 mdg1 11 7399 4.0 4.5 4.2 2.1 7438 chr3R 21761104 exon CG42335 + chr3R 21764823 intron CG42335 + chr3R 21768542 exon CG42335 + chr3R_11_21760001 chr3R_21760001 RAL-513 2150 chr3R 21845877 21845918 chr3R 21846064 21846109 8 189 4.0 1.0 2.5 2.3 232 chr3R 21845877 5` UTR,exon CR44087 +,Gr93d - chr3R 21845993 intron,exon CR44087 +,Gr93d - chr3R 21846109 5` UTR,exon CR44087 +,Gr93d - chr3R_8_21845001 chr3R_21845001 RAL-513 2151 chr3R 21903617 21903631 chr3R 21903734 21903747 5 117 0.0 6.0 3.0 1.2 130 chr3R 21903617 intron CG6678 + chr3R 21903682 intron CG6678 + chr3R 21903747 intron CG6678 + chr3R_5_21900001 chr3R_21900001 RAL-513 2152 chr3R 17389054 17389054 chr3R 21907534 21907534 5 4518480 10.0 18.5 14.2 0.3 4518480 chr3R 17389054 intron,3` UTR Brf -,lute + chr3R 19648294 5` UTR CG6195 - chr3R 21907534 intergenic CG6678 + chr3R_5_19645001 chr3R_19645001 RAL-513 2153 chr3R 21907534 21907534 chr3R 28831801 28831802 29 6924268 22.5 16.0 19.2 1.4 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_29_25365001 chr3R_25365001 RAL-513 2154 chr3R 9620954 9620956 chr3R 21907535 21907535 5 12286580 22.0 19.0 20.5 0.2 12286581 chr3R 9620954 intron CG8312 + chr3R 15764244 intergenic not near genes chr3R 21907535 intergenic CG6678 + chr3R_5_15760001 chr3R_15760001 RAL-513 2155 chr3R 21907535 21907535 chr3R 28831801 28831803 31 6924267 23.0 16.0 19.5 1.5 6924268 chr3R 21907535 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831803 intron WASp - chr3R_31_25365001 chr3R_25365001 RAL-513 2156 chr3R 21907536 21907536 chr3R 26659333 26659337 4 4751800 23.0 1.0 12.0 0.3 4751801 chr3R 21907536 intergenic CG6678 + chr3R 24283436 intergenic CR45662 - chr3R 26659337 intron beat-VII - chr3R_4_24280001 chr3R_24280001 RAL-513 2157 chr3R 21907536 21907536 chr3R 28831799 28831803 32 6924266 23.0 16.0 19.5 1.6 6924267 chr3R 21907536 intergenic CG6678 + chr3R 25369670 intron Fur1 - chr3R 28831803 intron WASp - chr3R_32_25365001 chr3R_25365001 RAL-513 2158 chr3R 21907536 21907536 chr3R 29013339 29013340 7 7105804 23.0 14.0 18.5 0.4 7105804 chr3R 21907536 intergenic CG6678 + chr3R 25460438 intron Fur1 - chr3R 29013340 intron wat - chr3R_7_25460001 chr3R_25460001 RAL-513 2159 chr3R 21939683 21939716 chr3R 21939811 21939843 5 128 5.0 4.5 4.8 0.9 160 chr3R 21939683 intergenic not near genes chr3R 21939763 intergenic not near genes chr3R 21939843 intergenic not near genes chr3R_5_21935001 chr3R_21935001 RAL-513 2160 chr3R 22055562 22055588 chr3R 22055747 22055777 10 202 3.0 1.5 2.2 3.1 215 chr3R 22055562 intron how + chr3R 22055670 intron how + chr3R 22055777 intron how + chr3R_10_22055001 chr3R_22055001 RAL-513 2161 chr3R 22084608 22084618 chr3R 22084702 22084727 4 96 0.0 5.5 2.8 1.1 119 chr3R 22084608 intergenic not near genes chr3R 22084668 intergenic not near genes chr3R 22084727 intergenic not near genes chr3R_4_22080001 chr3R_22080001 RAL-513 2162 chr3R 22108365 22108387 chr3R 22108600 22108619 5 241 1.0 2.0 1.5 2.0 254 chr3R 22108365 intron CG5778 - chr3R 22108492 intron CG5778 - chr3R 22108619 intron CG5778 - chr3R_5_22105001 chr3R_22105001 RAL-513 2163 chr3R 22168130 22168147 chr3R 22168266 22168299 4 148 1.5 3.0 2.2 1.2 169 chr3R 22168130 intron SKIP + chr3R 22168214 intron SKIP + chr3R 22168299 intron SKIP + chr3R_4_22165001 chr3R_22165001 RAL-513 2164 chr3R 22234068 22234098 chr3R 22234165 22234195 9 94 2.5 8.5 5.5 1.4 127 chr3R 22234068 intron SKIP + chr3R 22234132 intron SKIP + chr3R 22234195 intron SKIP + chr3R_9_22230001 chr3R_22230001 RAL-513 2165 chr3R 22234679 22234709 chr3R 22236007 22236048 pogo 7 1329 2.0 4.0 3.0 1.8 1369 chr3R 22234679 intron SKIP + chr3R 22235364 intron SKIP + chr3R 22236048 intron SKIP + chr3R_7_22235001 chr3R_22235001 RAL-513 2166 chr3R 22321645 22321684 chr3R 22321745 22321777 4 97 0.0 3.0 1.5 1.6 132 chr3R 22321645 intron CG34377 - chr3R 22321711 intron CG34377 - chr3R 22321777 intron CG34377 - chr3R_4_22320001 chr3R_22320001 RAL-513 2167 chr3R 22428579 22428609 chr3R 22428660 22428704 8 85 7.0 3.5 5.2 1.3 125 chr3R 22428579 intron CG13847 - chr3R 22428642 intron CG13847 - chr3R 22428704 intron CG13847 - chr3R_8_22425001 chr3R_22425001 RAL-513 2168 chr3R 22450533 22450543 chr3R 22453187 22453201 NOF 7 2656 6.5 3.5 5.0 1.2 2668 chr3R 22450533 intron CG34376 + chr3R 22451867 intron CG34376 + chr3R 22453201 intron CG34376 + chr3R_7_22450001 chr3R_22450001 RAL-513 2169 chr3R 22450544 22450569 chr3R 22453185 22453229 NOF 8 2648 3.5 3.0 3.2 1.9 2685 chr3R 22450544 intron CG34376 + chr3R 22451886 intron CG34376 + chr3R 22453229 intron CG34376 + chr3R_8_22450001 chr3R_22450001 RAL-513 2170 chr3R 22507798 22507820 chr3R 22507876 22507924 10 87 1.0 5.5 3.2 2.4 126 chr3R 22507798 intron Octbeta1R + chr3R 22507861 intron Octbeta1R + chr3R 22507924 intron Octbeta1R + chr3R_10_22505001 chr3R_22505001 RAL-513 2171 chr3R 22684216 22684239 chr3R 22684286 22684334 9 86 4.5 7.0 5.8 1.3 118 chr3R 22684216 intergenic not near genes chr3R 22684275 intergenic not near genes chr3R 22684334 intergenic not near genes chr3R_9_22680001 chr3R_22680001 RAL-513 2172 chr3R 22794504 22794549 chr3R 22794600 22794638 5 92 1.5 4.5 3.0 1.2 134 chr3R 22794504 intergenic CG7029 + chr3R 22794571 intergenic not near genes chr3R 22794638 intergenic not near genes chr3R_5_22790001 chr3R_22790001 RAL-513 2173 chr3R 22797739 22797933 chr3R 22797844 22798049 23 103 0.0 0.0 0.0 23.0 310 chr3R 22797739 intergenic not near genes chr3R 22797894 intergenic not near genes chr3R 22798049 intergenic not near genes chr3R_23_22795001 chr3R_22795001 RAL-513 2174 chr3R 22853271 22853298 chr3R 22853368 22853395 8 90 3.0 2.0 2.5 2.3 124 chr3R 22853271 intergenic not near genes chr3R 22853333 intergenic not near genes chr3R 22853395 intergenic not near genes chr3R_8_22850001 chr3R_22850001 RAL-513 2175 chr3R 22860133 22860156 chr3R 22860245 22860268 5 111 4.0 2.5 3.2 1.2 135 chr3R 22860133 intergenic not near genes chr3R 22860200 intergenic not near genes chr3R 22860268 intergenic not near genes chr3R_5_22860001 chr3R_22860001 RAL-513 2176 chr3R 22863908 22863931 chr3R 22864001 22864020 6 89 4.0 5.0 4.5 1.1 112 chr3R 22863908 intergenic not near genes chr3R 22863964 intergenic not near genes chr3R 22864020 intergenic not near genes chr3R_6_22860001 chr3R_22860001 RAL-513 2177 chr3R 22867420 22867460 chr3R 22867567 22867603 14 144 2.5 2.0 2.2 4.4 183 chr3R 22867420 intergenic not near genes chr3R 22867512 intergenic not near genes chr3R 22867603 intergenic not near genes chr3R_14_22865001 chr3R_22865001 RAL-513 2178 chr3R 22881215 22881230 chr3R 22884912 22884925 Doc 7 3705 2.0 6.0 4.0 1.4 3710 chr3R 22881215 intergenic not near genes chr3R 22883070 intergenic not near genes chr3R 22884925 intergenic not near genes chr3R_7_22880001 chr3R_22880001 RAL-513 2179 chr3R 22927882 22927885 chr3R 22927965 22927999 5 108 7.5 5.0 6.2 0.7 117 chr3R 22927882 intron klg + chr3R 22927940 intron klg + chr3R 22927999 intron klg + chr3R_5_22925001 chr3R_22925001 RAL-513 2180 chr3R 22927887 22927905 chr3R 22927963 22927980 5 95 3.5 5.0 4.2 1.0 93 chr3R 22927887 intron klg + chr3R 22927934 intron klg + chr3R 22927980 intron klg + chr3R_5_22925001 chr3R_22925001 RAL-513 2181 chr3R 22971224 22971267 chr3R 22971338 22971350 15 108 5.0 6.5 5.8 2.2 126 chr3R 22971224 intergenic not near genes chr3R 22971287 intergenic not near genes chr3R 22971350 intergenic not near genes chr3R_15_22970001 chr3R_22970001 RAL-513 2182 chr3R 23073673 23073678 chr3R 23073742 23073787 4 93 5.0 1.0 3.0 1.0 114 chr3R 23073673 intron CG13830 - chr3R 23073730 intron CG13830 - chr3R 23073787 intron CG13830 - chr3R_4_23070001 chr3R_23070001 RAL-513 2183 chr3R 23101366 23101411 chr3R 23101477 23101523 19 97 4.5 3.0 3.8 4.0 157 chr3R 23101366 intron CG13830 - chr3R 23101444 intron CG13830 - chr3R 23101523 intron CG13830 - chr3R_19_23100001 chr3R_23100001 RAL-513 2184 chr3R 23182694 23182705 chr3R 23182774 23182808 4 97 2.0 1.5 1.8 1.4 114 chr3R 23182694 intron Irk1 + chr3R 23182751 intron Irk1 + chr3R 23182808 intron Irk1 + chr3R_4_23180001 chr3R_23180001 RAL-513 2185 chr3R 23291243 23291256 chr3R 23291336 23291338 8 96 6.5 4.5 5.5 1.2 95 chr3R 23291243 3` UTR pnt - chr3R 23291290 3` UTR pnt - chr3R 23291338 3` UTR pnt - chr3R_8_23290001 chr3R_23290001 RAL-513 2186 chr3R 23291257 23291282 chr3R 23291335 23291379 8 90 4.0 4.5 4.2 1.5 122 chr3R 23291257 3` UTR pnt - chr3R 23291318 3` UTR pnt - chr3R 23291379 exon pnt - chr3R_8_23290001 chr3R_23290001 RAL-513 2187 chr3R 23335421 23335465 chr3R 23335518 23335562 6 90 3.5 4.5 4.0 1.2 141 chr3R 23335421 intron pnt - chr3R 23335492 intron pnt - chr3R 23335562 intron pnt - chr3R_6_23335001 chr3R_23335001 RAL-513 2188 chr3R 23453667 23453697 chr3R 23453763 23453773 9 90 2.0 3.5 2.8 2.4 106 chr3R 23453667 intron CG4374 - chr3R 23453720 intron CG4374 - chr3R 23453773 intron CG4374 - chr3R_9_23450001 chr3R_23450001 RAL-513 2189 chr3R 23497937 23497966 chr3R 23498038 23498069 4 97 2.0 5.0 3.5 0.9 132 chr3R 23497937 intergenic not near genes chr3R 23498003 intergenic not near genes chr3R 23498069 intergenic not near genes chr3R_4_23495001 chr3R_23495001 RAL-513 2190 chr3R 23563433 23563469 chr3R 23563537 23563558 9 101 3.0 7.0 5.0 1.5 125 chr3R 23563433 intron beat-IV + chr3R 23563496 intron beat-IV + chr3R 23563558 intron beat-IV + chr3R_9_23560001 chr3R_23560001 RAL-513 2191 chr3R 23564421 23564471 chr3R 23564585 23564616 10 160 3.0 3.0 3.0 2.5 195 chr3R 23564421 intron beat-IV + chr3R 23564518 intron beat-IV + chr3R 23564616 intron beat-IV + chr3R_10_23560001 chr3R_23560001 RAL-513 2192 chr3R 23626119 23626136 chr3R 23626233 23626244 5 110 2.5 2.0 2.2 1.6 125 chr3R 23626119 intron CG31145 - chr3R 23626182 intron CG31145 - chr3R 23626244 intron CG31145 - chr3R_5_23625001 chr3R_23625001 RAL-513 2193 chr3R 23626147 23626159 chr3R 23626232 23626273 5 98 0.0 2.0 1.0 2.5 126 chr3R 23626147 intron CG31145 - chr3R 23626210 intron CG31145 - chr3R 23626273 intron CG31145 - chr3R_5_23625001 chr3R_23625001 RAL-513 2194 chr3R 23684690 23684726 chr3R 23685195 23685205 roo 4 495 1.0 8.0 4.5 0.7 515 chr3R 23684690 exon CG18754 + chr3R 23684948 intron CG18754 + chr3R 23685205 exon CG18754 + chr3R_4_23680001 chr3R_23680001 RAL-513 2195 chr3R 23721002 23721050 chr3R 23721140 23721188 15 142 37.0 36.5 36.8 0.4 186 chr3R 23721002 exon CG10232 - chr3R 23721095 exon CG10232 - chr3R 23721188 intron CG10232 - chr3R_15_23720001 chr3R_23720001 RAL-513 2196 chr3R 23733108 23733155 chr3R 23733242 23733258 7 130 1.5 2.0 1.8 2.5 150 chr3R 23733108 intron Rpn9 - chr3R 23733183 intron Rpn9 - chr3R 23733258 5` UTR Rpn9 - chr3R_7_23730001 chr3R_23730001 RAL-513 2197 chr3R 23823329 23823379 chr3R 23823454 23823490 16 121 4.0 4.0 4.0 3.2 161 chr3R 23823329 intron CG34355 + chr3R 23823410 intron CG34355 + chr3R 23823490 intron CG34355 + chr3R_16_23820001 chr3R_23820001 RAL-513 2198 chr3R 23835383 23835433 chr3R 23844553 23844570 roo 13 9167 3.5 1.0 2.2 4.1 9187 chr3R 23835383 intron CG34355 + chr3R 23839976 intron CG34355 + chr3R 23844570 intron CG34355 + chr3R_13_23835001 chr3R_23835001 RAL-513 2199 chr3R 23851069 23851082 chr3R 23858755 23858765 opus 4 7685 3.0 6.5 4.8 0.7 7696 chr3R 23851069 3` UTR CG34355 + chr3R 23854917 intergenic not near genes chr3R 23858765 intergenic not near genes chr3R_4_23850001 chr3R_23850001 RAL-513 2200 chr3R 23868208 23868230 chr3R 23868306 23868324 8 95 5.0 4.5 4.8 1.4 116 chr3R 23868208 intron Pli - chr3R 23868266 intron Pli - chr3R 23868324 intron Pli - chr3R_8_23865001 chr3R_23865001 RAL-513 2201 chr3R 23884990 23885036 chr3R 23885116 23885160 11 122 3.0 1.5 2.2 3.4 170 chr3R 23884990 intron Pli - chr3R 23885075 intron Pli - chr3R 23885160 intron Pli - chr3R_11_23885001 chr3R_23885001 RAL-513 2202 chr3R 23888067 23888102 chr3R 23888173 23888179 6 101 3.5 2.0 2.8 1.6 112 chr3R 23888067 intron Pli - chr3R 23888123 intron Pli - chr3R 23888179 intron Pli - chr3R_6_23885001 chr3R_23885001 RAL-513 2203 chr3R 23893784 23893814 chr3R 23893894 23893922 9 118 4.5 8.0 6.2 1.2 138 chr3R 23893784 intergenic sba -,tbrd-1 - chr3R 23893853 intergenic sba -,tbrd-1 - chr3R 23893922 intergenic sba - chr3R_9_23890001 chr3R_23890001 RAL-513 2204 chr3R 23944891 23944936 chr3R 23944995 23945037 21 101 1.0 5.0 3.0 5.2 146 chr3R 23944891 intron CG12268 - chr3R 23944964 intron CG12268 - chr3R 23945037 exon CG12268 - chr3R_21_23940001 chr3R_23940001 RAL-513 2205 chr3R 23949027 23949074 chr3R 23949124 23949171 7 95 1.0 2.5 1.8 2.5 144 chr3R 23949027 intergenic not near genes chr3R 23949099 intergenic not near genes chr3R 23949171 intergenic not near genes chr3R_7_23945001 chr3R_23945001 RAL-513 2206 chr3R 24042001 24042008 chr3R 24042129 24042139 4 131 1.0 6.5 3.8 0.8 138 chr3R 24042001 3` UTR spas + chr3R 24042070 3` UTR spas + chr3R 24042139 3` UTR spas + chr3R_4_24040001 chr3R_24040001 RAL-513 2207 chr3R 24042012 24042022 chr3R 24042120 24042154 5 127 0.5 5.0 2.8 1.3 142 chr3R 24042012 3` UTR spas + chr3R 24042083 3` UTR spas + chr3R 24042154 3` UTR spas + chr3R_5_24040001 chr3R_24040001 RAL-513 2208 chr3R 24042024 24042028 chr3R 24042115 24042154 5 120 0.5 4.0 2.2 1.6 130 chr3R 24042024 3` UTR spas + chr3R 24042089 3` UTR spas + chr3R 24042154 3` UTR spas + chr3R_5_24040001 chr3R_24040001 RAL-513 2209 chr3R 24072069 24072122 chr3R 24072526 24072528 jockey 8 435 4.5 4.0 4.2 1.5 459 chr3R 24072069 intron 4EHP - chr3R 24072298 intron 4EHP - chr3R 24072528 intron 4EHP - chr3R_8_24070001 chr3R_24070001 RAL-513 2210 chr3R 24076911 24076945 chr3R 24078383 24078431 hobo 7 1478 7.0 5.5 6.2 1.0 1520 chr3R 24076911 intron 4EHP - chr3R 24077671 intron 4EHP - chr3R 24078431 intron 4EHP - chr3R_7_24075001 chr3R_24075001 RAL-513 2211 chr3R 24100437 24100458 chr3R 24100552 24100573 5 114 6.5 2.0 4.2 1.0 136 chr3R 24100437 intron 4EHP - chr3R 24100505 intron 4EHP - chr3R 24100573 intron 4EHP - chr3R_5_24100001 chr3R_24100001 RAL-513 2212 chr3R 24173536 24173580 chr3R 24173638 24173681 8 97 1.5 2.0 1.8 2.9 145 chr3R 24173536 intron CG13606 + chr3R 24173608 intron CG13606 + chr3R 24173681 intron CG13606 + chr3R_8_24170001 chr3R_24170001 RAL-513 2213 chr3R 24199717 24199771 chr3R 24199817 24199852 13 97 3.0 3.0 3.0 3.2 135 chr3R 24199717 intron twin - chr3R 24199784 intron twin - chr3R 24199852 intron twin - chr3R_13_24195001 chr3R_24195001 RAL-513 2214 chr3R 24207197 24207230 chr3R 24212293 24212326 flea 7 5095 6.0 7.5 6.8 0.9 5129 chr3R 24207197 intron twin - chr3R 24209762 intron twin - chr3R 24212326 intron twin - chr3R_7_24205001 chr3R_24205001 RAL-513 2215 chr3R 24413290 24413331 chr3R 24413581 24413600 12 283 4.0 4.5 4.2 2.3 310 chr3R 24413290 intron nAChRalpha1 - chr3R 24413445 intron nAChRalpha1 - chr3R 24413600 intron nAChRalpha1 - chr3R_12_24410001 chr3R_24410001 RAL-513 2216 chr3R 24431583 24431622 chr3R 24431681 24431720 10 97 4.0 1.0 2.5 2.9 137 chr3R 24431583 intron nAChRalpha1 - chr3R 24431652 intron nAChRalpha1 - chr3R 24431720 intron nAChRalpha1 - chr3R_10_24430001 chr3R_24430001 RAL-513 2217 chr3R 24433469 24433476 chr3R 24433567 24433569 4 97 4.5 6.5 5.5 0.6 100 chr3R 24433469 intron nAChRalpha1 - chr3R 24433519 intron nAChRalpha1 - chr3R 24433569 intron nAChRalpha1 - chr3R_4_24430001 chr3R_24430001 RAL-513 2218 chr3R 24433477 24433503 chr3R 24433563 24433588 12 95 4.0 6.0 5.0 2.0 111 chr3R 24433477 intron nAChRalpha1 - chr3R 24433532 intron nAChRalpha1 - chr3R 24433588 intron nAChRalpha1 - chr3R_12_24430001 chr3R_24430001 RAL-513 2219 chr3R 24434220 24434274 chr3R 24434318 24434371 16 92 4.5 3.5 4.0 3.2 151 chr3R 24434220 intron nAChRalpha1 - chr3R 24434296 intron nAChRalpha1 - chr3R 24434371 intron nAChRalpha1 - chr3R_16_24430001 chr3R_24430001 RAL-513 2220 chr3R 24466445 24466497 chr3R 24466542 24466595 11 97 4.0 3.5 3.8 2.3 150 chr3R 24466445 intergenic not near genes chr3R 24466520 intergenic not near genes chr3R 24466595 intergenic not near genes chr3R_11_24465001 chr3R_24465001 RAL-513 2221 chr3R 24493045 24493087 chr3R 24493151 24493192 9 104 3.5 5.0 4.2 1.7 147 chr3R 24493045 intergenic not near genes chr3R 24493118 intergenic not near genes chr3R 24493192 intergenic not near genes chr3R_9_24490001 chr3R_24490001 RAL-513 2222 chr3R 24493284 24493311 chr3R 24493531 24493551 BS 13 246 5.0 6.5 5.8 1.9 267 chr3R 24493284 intergenic not near genes chr3R 24493418 intergenic not near genes chr3R 24493551 intergenic not near genes chr3R_13_24490001 chr3R_24490001 RAL-513 2223 chr3R 24527781 24527830 chr3R 24527892 24527941 13 105 2.5 0.5 1.5 5.2 160 chr3R 24527781 intergenic CG13618 +,CG6607 + chr3R 24527861 intergenic CG6607 +,CG13618 + chr3R 24527941 intergenic CG6607 +,CG13618 + chr3R_13_24525001 chr3R_24525001 RAL-513 2224 chr3R 24566350 24566368 chr3R 24566444 24566475 7 103 8.5 2.5 5.5 1.1 125 chr3R 24566350 intron CG13624 - chr3R 24566412 intron CG13624 - chr3R 24566475 intron CG13624 - chr3R_7_24565001 chr3R_24565001 RAL-513 2225 chr3R 24572109 24572138 chr3R 24572198 24572250 13 106 7.0 3.5 5.2 2.1 141 chr3R 24572109 intron CG13624 - chr3R 24572180 intron CG13624 - chr3R 24572250 intron CG13624 - chr3R_13_24570001 chr3R_24570001 RAL-513 2226 chr3R 24594660 24594668 chr3R 24594919 24594928 pogo 4 260 3.5 5.5 4.5 0.7 268 chr3R 24594660 intron mld + chr3R 24594794 intron mld + chr3R 24594928 intron mld + chr3R_4_24590001 chr3R_24590001 RAL-513 2227 chr3R 24670164 24670175 chr3R 24670268 24670280 8 105 1.5 2.0 1.8 2.9 116 chr3R 24670164 intron slo + chr3R 24670222 intron slo + chr3R 24670280 intron slo + chr3R_8_24670001 chr3R_24670001 RAL-513 2228 chr3R 24671203 24671242 chr3R 24671300 24671300 4 82 4.0 2.0 3.0 1.0 97 chr3R 24671203 intron slo + chr3R 24671252 intron slo + chr3R 24671300 intron slo + chr3R_4_24670001 chr3R_24670001 RAL-513 2229 chr3R 24730083 24730096 chr3R 24732470 24732493 Doc 5 2393 9.0 0.0 4.5 0.9 2410 chr3R 24730083 intron tok + chr3R 24731288 intron tok + chr3R 24732493 intron tok + chr3R_5_24730001 chr3R_24730001 RAL-513 2230 chr3R 24743013 24743063 chr3R 24743118 24743142 11 98 4.5 3.5 4.0 2.2 129 chr3R 24743013 intron tok + chr3R 24743078 intron tok + chr3R 24743142 intron tok + chr3R_11_24740001 chr3R_24740001 RAL-513 2231 chr3R 24789989 24790006 chr3R 24790137 24790145 6 155 1.5 2.5 2.0 2.0 156 chr3R 24789989 intron,5` UTR Ets96B +,CG13634 - chr3R 24790067 intron,5` UTR Ets96B +,CG13634 - chr3R 24790145 intron Ets96B + chr3R_6_24790001 chr3R_24790001 RAL-513 2232 chr3R 24854873 24854906 chr3R 24854975 24855003 4 101 1.5 5.0 3.2 1.0 130 chr3R 24854873 3` UTR HdacX - chr3R 24854938 3` UTR HdacX - chr3R 24855003 3` UTR HdacX - chr3R_4_24850001 chr3R_24850001 RAL-513 2233 chr3R 24927115 24927159 chr3R 24931916 24931933 Doc 9 4802 2.0 4.0 3.0 2.2 4818 chr3R 24927115 intergenic Trf4-2 + chr3R 24929524 intergenic not near genes chr3R 24931933 intergenic CG11771 + chr3R_9_24925001 chr3R_24925001 RAL-513 2234 chr3R 25001234 25001254 chr3R 25001334 25001346 8 99 8.0 2.0 5.0 1.3 112 chr3R 25001234 intron tnc + chr3R 25001290 intron tnc + chr3R 25001346 intron tnc + chr3R_8_25000001 chr3R_25000001 RAL-513 2235 chr3R 25001259 25001283 chr3R 25001331 25001369 7 89 2.5 2.0 2.2 2.2 110 chr3R 25001259 intron tnc + chr3R 25001314 intron tnc + chr3R 25001369 intron tnc + chr3R_7_25000001 chr3R_25000001 RAL-513 2236 chr3R 25004897 25004922 chr3R 25005000 25005025 10 101 1.5 7.0 4.2 1.9 128 chr3R 25004897 intron tnc + chr3R 25004961 intron tnc + chr3R 25005025 intron tnc + chr3R_10_25000001 chr3R_25000001 RAL-513 2237 chr3R 25027531 25027549 chr3R 25027763 25027778 10 230 10.0 8.0 9.0 1.0 247 chr3R 25027531 intron Hr96 + chr3R 25027654 intron Hr96 + chr3R 25027778 intron Hr96 + chr3R_10_25025001 chr3R_25025001 RAL-513 2238 chr3R 25027553 25027570 chr3R 25027754 25027789 7 218 4.0 6.0 5.0 1.2 236 chr3R 25027553 intron Hr96 + chr3R 25027671 intron Hr96 + chr3R 25027789 intron Hr96 + chr3R_7_25025001 chr3R_25025001 RAL-513 2239 chr3R 25296156 25296197 chr3R 25296250 25296298 13 100 4.5 5.0 4.8 2.2 142 chr3R 25296156 3` UTR CG31097 - chr3R 25296227 3` UTR CG31097 - chr3R 25296298 3` UTR CG31097 - chr3R_13_25295001 chr3R_25295001 RAL-513 2240 chr3R 25368456 25368492 chr3R 25368593 25368611 5 133 3.0 0.0 1.5 2.0 155 chr3R 25368456 intron Fur1 - chr3R 25368534 intron Fur1 - chr3R 25368611 intron Fur1 - chr3R_5_25365001 chr3R_25365001 RAL-513 2241 chr3R 25394076 25394100 chr3R 25394177 25394187 5 97 12.0 5.5 8.8 0.5 111 chr3R 25394076 intron Fur1 - chr3R 25394132 intron Fur1 - chr3R 25394187 intron Fur1 - chr3R_5_25390001 chr3R_25390001 RAL-513 2242 chr3R 25422046 25422091 chr3R 25422146 25422175 10 98 3.5 1.0 2.2 3.1 129 chr3R 25422046 intron Fur1 - chr3R 25422110 intron Fur1 - chr3R 25422175 intron Fur1 - chr3R_10_25420001 chr3R_25420001 RAL-513 2243 chr3R 25669066 25669097 chr3R 25669160 25669175 11 100 4.0 4.5 4.2 2.1 109 chr3R 25669066 intron Lgr3 + chr3R 25669120 intron Lgr3 + chr3R 25669175 intron Lgr3 + chr3R_11_25665001 chr3R_25665001 RAL-513 2244 chr3R 25689110 25689164 chr3R 25689238 25689254 10 121 7.0 5.5 6.2 1.4 144 chr3R 25689110 intergenic not near genes chr3R 25689182 intergenic not near genes chr3R 25689254 intergenic not near genes chr3R_10_25685001 chr3R_25685001 RAL-513 2245 chr3R 25698523 25698553 chr3R 25698635 25698667 7 110 4.5 2.0 3.2 1.7 144 chr3R 25698523 intergenic LpR2 - chr3R 25698595 intergenic LpR2 - chr3R 25698667 intergenic LpR2 - chr3R_7_25695001 chr3R_25695001 RAL-513 2246 chr3R 25725823 25725852 chr3R 25734988 25735032 roo 5 9165 2.5 2.0 2.2 1.6 9209 chr3R 25725823 intron LpR2 - chr3R 25730428 intron LpR2 - chr3R 25735032 intron LpR2 - chr3R_5_25730001 chr3R_25730001 RAL-513 2247 chr3R 25832675 25832722 chr3R 25841877 25841909 roo 10 9195 3.5 4.5 4.0 2.0 9234 chr3R 25832675 exon alpha4GT2 + chr3R 25837292 intron alpha4GT2 + chr3R 25841909 exon alpha4GT2 + chr3R_10_25835001 chr3R_25835001 RAL-513 2248 chr3R 25843619 25843668 chr3R 25843768 25843816 7 149 4.5 3.0 3.8 1.5 197 chr3R 25843619 intergenic CR45653 + chr3R 25843718 intergenic CR45653 + chr3R 25843816 intergenic CR45653 + chr3R_7_25840001 chr3R_25840001 RAL-513 2249 chr3R 25847675 25847719 chr3R 25847853 25847903 12 182 4.0 2.0 3.0 3.0 228 chr3R 25847675 intergenic CR45656 -,CR45657 + chr3R 25847789 intergenic CR45656 -,CR45657 + chr3R 25847903 intergenic CR45657 +,CR45656 - chr3R_12_25845001 chr3R_25845001 RAL-513 2250 chr3R 25905626 25905654 chr3R 25905748 25905777 7 122 1.5 2.0 1.8 2.5 151 chr3R 25905626 intron CR43259 - chr3R 25905702 intron CR43259 - chr3R 25905777 intron CR43259 - chr3R_7_25905001 chr3R_25905001 RAL-513 2251 chr3R 25927483 25927516 chr3R 25927585 25927612 12 98 7.0 0.0 3.5 2.7 129 chr3R 25927483 intron CCAP-R - chr3R 25927548 intron CCAP-R - chr3R 25927612 intron CCAP-R - chr3R_12_25925001 chr3R_25925001 RAL-513 2252 chr3R 26038785 26038823 chr3R 26039136 26039174 8 350 3.0 2.0 2.5 2.3 389 chr3R 26038785 intergenic not near genes chr3R 26038980 intergenic not near genes chr3R 26039174 intergenic not near genes chr3R_8_26035001 chr3R_26035001 RAL-513 2253 chr3R 26104065 26104098 chr3R 26105124 26105175 13 1062 27.5 32.5 30.0 0.4 1110 chr3R 26104065 intergenic not near genes chr3R 26104620 intergenic not near genes chr3R 26105175 intergenic not near genes chr3R_13_26100001 chr3R_26100001 RAL-513 2254 chr3R 26121928 26121980 chr3R 26122044 26122086 15 112 0.5 6.5 3.5 3.3 158 chr3R 26121928 intron CG31324 + chr3R 26122007 intron CG31324 + chr3R 26122086 intron CG31324 + chr3R_15_26120001 chr3R_26120001 RAL-513 2255 chr3R 26122443 26122479 chr3R 26122539 26122556 15 92 14.0 12.0 13.0 1.1 113 chr3R 26122443 intron CG31324 + chr3R 26122500 intron CG31324 + chr3R 26122556 intron CG31324 + chr3R_15_26120001 chr3R_26120001 RAL-513 2256 chr3R 26119144 26119153 chr3R 26122641 26122667 9 3485 35.0 33.5 34.2 0.3 3523 chr3R 26119144 intron CG31324 + chr3R 26120906 intron CG31324 + chr3R 26122667 intron CG31324 + chr3R_9_26120001 chr3R_26120001 RAL-513 2257 chr3R 26126272 26126289 chr3R 26126385 26126410 4 121 3.5 4.5 4.0 0.8 138 chr3R 26126272 intron CG31324 + chr3R 26126341 intron CG31324 + chr3R 26126410 intron CG31324 + chr3R_4_26125001 chr3R_26125001 RAL-513 2258 chr3R 26132469 26132504 chr3R 26132750 26132785 10 277 26.0 19.5 22.8 0.4 316 chr3R 26132469 intergenic not near genes chr3R 26132627 intergenic not near genes chr3R 26132785 intergenic CG6142 + chr3R_10_26130001 chr3R_26130001 RAL-513 2259 chr3R 26131193 26131195 chr3R 26135269 26135285 5 4080 24.5 28.5 26.5 0.2 4092 chr3R 26131193 intergenic not near genes chr3R 26133239 5` UTR CG6142 + chr3R 26135285 exon CG6142 + chr3R_5_26130001 chr3R_26130001 RAL-513 2260 chr3R 26131189 26131221 chr3R 26135296 26135318 8 4089 27.5 24.0 25.8 0.3 4129 chr3R 26131189 intergenic not near genes chr3R 26133254 5` UTR CG6142 + chr3R 26135318 exon CG6142 + chr3R_8_26130001 chr3R_26130001 RAL-513 2261 chr3R 26235500 26235522 chr3R 26235568 26235624 6 86 3.0 4.0 3.5 1.3 124 chr3R 26235500 5` UTR CR42745 + chr3R 26235562 5` UTR CR42745 + chr3R 26235624 intron CR42745 + chr3R_6_26235001 chr3R_26235001 RAL-513 2262 chr3R 26370329 26370357 chr3R 26370419 26370460 9 99 0.0 3.5 1.8 3.2 131 chr3R 26370329 intergenic not near genes chr3R 26370394 intergenic not near genes chr3R 26370460 intergenic not near genes chr3R_9_26370001 chr3R_26370001 RAL-513 2263 chr3R 26373940 26373990 chr3R 26374057 26374107 8 116 4.5 4.5 4.5 1.5 167 chr3R 26373940 intergenic not near genes chr3R 26374024 intergenic not near genes chr3R 26374107 intergenic not near genes chr3R_8_26370001 chr3R_26370001 RAL-513 2264 chr3R 26376326 26376338 chr3R 26385505 26385516 roo 5 9178 7.5 7.5 7.5 0.6 9190 chr3R 26376326 intergenic not near genes chr3R 26380921 intergenic not near genes chr3R 26385516 intergenic not near genes chr3R_5_26380001 chr3R_26380001 RAL-513 2265 chr3R 26376339 26376356 chr3R 26385499 26385516 roo 9 9169 4.5 7.0 5.8 1.3 9177 chr3R 26376339 intergenic not near genes chr3R 26380928 intergenic not near genes chr3R 26385516 intergenic not near genes chr3R_9_26380001 chr3R_26380001 RAL-513 2266 chr3R 26510503 26510530 chr3R 26519578 26519605 roo 7 9075 4.0 6.0 5.0 1.2 9102 chr3R 26510503 intron plum - chr3R 26515054 intron plum - chr3R 26519605 intron,5` UTR plum -,CR45226 + chr3R_7_26515001 chr3R_26515001 RAL-513 2267 chr3R 26540977 26541031 chr3R 26541077 26541117 9 89 2.5 2.5 2.5 2.6 140 chr3R 26540977 intron scrib + chr3R 26541047 intron scrib + chr3R 26541117 intron scrib + chr3R_9_26540001 chr3R_26540001 RAL-513 2268 chr3R 26542040 26542078 chr3R 26542151 26542162 16 105 2.5 4.5 3.5 3.6 122 chr3R 26542040 intron scrib + chr3R 26542101 intron scrib + chr3R 26542162 intron scrib + chr3R_16_26540001 chr3R_26540001 RAL-513 2269 chr3R 26558309 26558360 chr3R 26565641 26565665 Stalker4 16 7319 4.5 3.0 3.8 3.3 7356 chr3R 26558309 intron scrib + chr3R 26561987 intron scrib + chr3R 26565665 intron scrib + chr3R_16_26560001 chr3R_26560001 RAL-513 2270 chr3R 26574994 26575038 chr3R 26575093 26575132 8 97 3.0 3.5 3.2 1.9 138 chr3R 26574994 exon scrib + chr3R 26575063 intron scrib + chr3R 26575132 intron scrib + chr3R_8_26575001 chr3R_26575001 RAL-513 2271 chr3R 26611327 26611348 chr3R 26611421 26611429 7 93 5.5 4.5 5.0 1.2 102 chr3R 26611327 intergenic not near genes chr3R 26611378 intergenic not near genes chr3R 26611429 intergenic not near genes chr3R_7_26610001 chr3R_26610001 RAL-513 2272 chr3R 26611351 26611372 chr3R 26611417 26611468 10 83 1.5 4.0 2.8 2.6 117 chr3R 26611351 intergenic not near genes chr3R 26611410 intergenic not near genes chr3R 26611468 intergenic not near genes chr3R_10_26610001 chr3R_26610001 RAL-513 2273 chr3R 26641626 26641663 chr3R 26641723 26641738 8 96 3.5 3.5 3.5 1.8 112 chr3R 26641626 intergenic not near genes chr3R 26641682 intergenic not near genes chr3R 26641738 intergenic not near genes chr3R_8_26640001 chr3R_26640001 RAL-513 2274 chr3R 26642719 26642744 chr3R 26643132 26643153 jockey 6 412 8.0 6.0 7.0 0.8 434 chr3R 26642719 intergenic not near genes chr3R 26642936 intergenic not near genes chr3R 26643153 intergenic not near genes chr3R_6_26640001 chr3R_26640001 RAL-513 2275 chr3R 26659265 26659280 chr3R 26659479 26659483 4 212 5.5 3.5 4.5 0.7 218 chr3R 26659265 intron beat-VII - chr3R 26659374 intron beat-VII - chr3R 26659483 intron beat-VII - chr3R_4_26655001 chr3R_26655001 RAL-513 2276 chr3R 26659291 26659298 chr3R 26659476 26659505 4 202 3.0 3.5 3.2 1.0 214 chr3R 26659291 intron beat-VII - chr3R 26659398 intron beat-VII - chr3R 26659505 intron beat-VII - chr3R_4_26655001 chr3R_26655001 RAL-513 2277 chr3R 26675692 26675731 chr3R 26675792 26675801 11 102 5.0 3.0 4.0 2.2 109 chr3R 26675692 intron beat-VII - chr3R 26675746 intron beat-VII - chr3R 26675801 intron beat-VII - chr3R_11_26675001 chr3R_26675001 RAL-513 2278 chr3R 26710808 26710854 chr3R 26710912 26710958 19 95 3.0 7.5 5.2 3.1 150 chr3R 26710808 intron amon - chr3R 26710883 intron amon - chr3R 26710958 intron amon - chr3R_19_26710001 chr3R_26710001 RAL-513 2279 chr3R 26770222 26770246 chr3R 26770318 26770343 10 95 6.0 4.5 5.2 1.6 121 chr3R 26770222 intergenic CR45563 + chr3R 26770282 intergenic CR45563 + chr3R 26770343 intergenic not near genes chr3R_10_26770001 chr3R_26770001 RAL-513 2280 chr3R 26770252 26770271 chr3R 26770317 26770354 10 89 2.0 4.5 3.2 2.4 102 chr3R 26770252 intergenic CR45563 + chr3R 26770303 intergenic CR45563 + chr3R 26770354 intergenic not near genes chr3R_10_26770001 chr3R_26770001 RAL-513 2281 chr3R 26781771 26781804 chr3R 26781849 26781898 8 88 6.5 4.0 5.2 1.3 127 chr3R 26781771 intergenic not near genes chr3R 26781834 intergenic not near genes chr3R 26781898 intergenic not near genes chr3R_8_26780001 chr3R_26780001 RAL-513 2282 chr3R 26810558 26810578 chr3R 26811057 26811076 roo 6 502 4.5 11.0 7.8 0.7 518 chr3R 26810558 intron Tl + chr3R 26810817 intron Tl + chr3R 26811076 intron Tl + chr3R_6_26810001 chr3R_26810001 RAL-513 2283 chr3R 26828646 26828676 chr3R 26828739 26828772 4 94 3.0 1.0 2.0 1.3 126 chr3R 26828646 intron Tl + chr3R 26828709 intron Tl + chr3R 26828772 intron Tl + chr3R_4_26825001 chr3R_26825001 RAL-513 2284 chr3R 26901493 26901533 chr3R 26901594 26901636 4 104 4.0 0.0 2.0 1.3 143 chr3R 26901493 intron T48 + chr3R 26901564 intron T48 + chr3R 26901636 intron T48 + chr3R_4_26900001 chr3R_26900001 RAL-513 2285 chr3R 26908036 26908065 chr3R 26908131 26908154 7 100 3.0 5.0 4.0 1.4 118 chr3R 26908036 intron T48 + chr3R 26908095 intron T48 + chr3R 26908154 intron T48 + chr3R_7_26905001 chr3R_26905001 RAL-513 2286 chr3R 26960720 26960725 chr3R 26960829 26960834 4 108 8.5 2.5 5.5 0.6 114 chr3R 26960720 intergenic Tsp97E - chr3R 26960777 intergenic Tsp97E - chr3R 26960834 intergenic Tsp97E - chr3R_4_26960001 chr3R_26960001 RAL-513 2287 chr3R 26960748 26960755 chr3R 26960822 26960822 4 86 4.0 2.0 3.0 1.0 74 chr3R 26960748 intergenic Tsp97E - chr3R 26960785 intergenic Tsp97E - chr3R 26960822 intergenic Tsp97E - chr3R_4_26960001 chr3R_26960001 RAL-513 2288 chr3R 27007392 27007404 chr3R 27016547 27016558 roo 6 9154 8.0 4.0 6.0 0.9 9166 chr3R 27007392 intron RYa-R + chr3R 27011975 intron RYa-R + chr3R 27016558 intron RYa-R + chr3R_6_27010001 chr3R_27010001 RAL-513 2289 chr3R 27007406 27007433 chr3R 27016538 27016588 roo 8 9146 3.0 1.5 2.2 2.5 9182 chr3R 27007406 intron RYa-R + chr3R 27011997 intron RYa-R + chr3R 27016588 intron RYa-R + chr3R_8_27010001 chr3R_27010001 RAL-513 2290 chr3R 27028721 27028756 chr3R 27028800 27028852 9 90 2.0 2.5 2.2 2.8 131 chr3R 27028721 intron RYa-R + chr3R 27028786 intron RYa-R + chr3R 27028852 intron RYa-R + chr3R_9_27025001 chr3R_27025001 RAL-513 2291 chr3R 27030201 27030249 chr3R 27030350 27030385 11 140 2.0 0.5 1.2 5.0 184 chr3R 27030201 intron RYa-R + chr3R 27030293 intron RYa-R + chr3R 27030385 intron RYa-R + chr3R_11_27030001 chr3R_27030001 RAL-513 2292 chr3R 27109966 27110020 chr3R 27110062 27110116 10 85 4.0 3.0 3.5 2.2 150 chr3R 27109966 intron,5` UTR gb -,CR45209 + chr3R 27110041 intron,5` UTR gb -,CR45209 + chr3R 27110116 intron,5` UTR gb -,CR45209 + chr3R_10_27110001 chr3R_27110001 RAL-513 2293 chr3R 27133500 27133542 chr3R 27133637 27133675 9 134 1.5 3.0 2.2 2.8 175 chr3R 27133500 intron CG6051 - chr3R 27133588 intron CG6051 - chr3R 27133675 intron CG6051 - chr3R_9_27130001 chr3R_27130001 RAL-513 2294 chr3R 27140496 27140548 chr3R 27148126 27148175 412 21 7623 5.0 4.5 4.8 3.6 7679 chr3R 27140496 intron CG6051 - chr3R 27144336 intron CG6051 - chr3R 27148175 intron CG6051 - chr3R_21_27140001 chr3R_27140001 RAL-513 2295 chr3R 27315974 27316011 chr3R 27316070 27316107 16 93 4.0 2.5 3.2 3.8 133 chr3R 27315974 intron CG3339 - chr3R 27316040 intron CG3339 - chr3R 27316107 exon CG3339 - chr3R_16_27315001 chr3R_27315001 RAL-513 2296 chr3R 27317087 27317104 chr3R 27317184 27317188 7 96 6.5 11.0 8.8 0.7 101 chr3R 27317087 intron CG3339 - chr3R 27317138 intron CG3339 - chr3R 27317188 intron CG3339 - chr3R_7_27315001 chr3R_27315001 RAL-513 2297 chr3R 27329453 27329502 chr3R 27329550 27329599 12 96 3.5 3.0 3.2 2.9 146 chr3R 27329453 intergenic CG3330 - chr3R 27329526 intergenic CG3330 - chr3R 27329599 intergenic CG3330 - chr3R_12_27325001 chr3R_27325001 RAL-513 2298 chr3R 27342796 27342824 chr3R 27351381 27351425 Tirant 10 8598 3.0 6.5 4.8 1.7 8629 chr3R 27342796 intron CG42534 + chr3R 27347110 intron CG42534 + chr3R 27351425 intron CG42534 + chr3R_10_27345001 chr3R_27345001 RAL-513 2299 chr3R 27492361 27492410 chr3R 27492468 27492494 9 103 4.0 2.0 3.0 2.2 133 chr3R 27492361 intergenic not near genes chr3R 27492428 intergenic not near genes chr3R 27492494 intergenic not near genes chr3R_9_27490001 chr3R_27490001 RAL-513 2300 chr3R 27496575 27496627 chr3R 27496698 27496744 6 120 2.5 3.0 2.8 1.6 169 chr3R 27496575 intergenic not near genes chr3R 27496660 intergenic not near genes chr3R 27496744 intergenic not near genes chr3R_6_27495001 chr3R_27495001 RAL-513 2301 chr3R 27511238 27511263 chr3R 27511345 27511361 5 105 5.5 3.5 4.5 0.9 123 chr3R 27511238 intergenic not near genes chr3R 27511300 intergenic not near genes chr3R 27511361 intergenic not near genes chr3R_5_27510001 chr3R_27510001 RAL-513 2302 chr3R 27511266 27511281 chr3R 27511342 27511385 9 94 5.0 3.0 4.0 1.8 119 chr3R 27511266 intergenic not near genes chr3R 27511326 intergenic not near genes chr3R 27511385 intergenic not near genes chr3R_9_27510001 chr3R_27510001 RAL-513 2303 chr3R 27648604 27648859 chr3R 27648688 27648956 14 94 8.0 0.5 4.2 2.7 352 chr3R 27648604 intron tau - chr3R 27648780 intron tau - chr3R 27648956 intron tau - chr3R_14_27645001 chr3R_27645001 RAL-513 2304 chr3R 27706770 27706803 chr3R 27706854 27706900 6 92 5.0 3.0 4.0 1.2 130 chr3R 27706770 intergenic CG12428 -,CG12877 + chr3R 27706835 intergenic CG12428 -,CG12877 + chr3R 27706900 intergenic CG12428 -,CG12877 + chr3R_6_27705001 chr3R_27705001 RAL-513 2305 chr3R 27718558 27718599 chr3R 27718656 27718687 7 93 3.0 0.5 1.8 2.5 129 chr3R 27718558 intergenic not near genes chr3R 27718622 intergenic not near genes chr3R 27718687 intergenic not near genes chr3R_7_27715001 chr3R_27715001 RAL-513 2306 chr3R 27725551 27725581 chr3R 27731013 27731014 I-element 9 5455 6.0 5.5 5.8 1.3 5463 chr3R 27725551 intergenic not near genes chr3R 27728282 intergenic not near genes chr3R 27731014 intergenic not near genes chr3R_9_27725001 chr3R_27725001 RAL-513 2307 chr3R 27733040 27733057 chr3R 27733140 27733154 4 94 29.0 31.5 30.2 0.1 114 chr3R 27733040 intergenic not near genes chr3R 27733097 intergenic not near genes chr3R 27733154 intergenic not near genes chr3R_4_27730001 chr3R_27730001 RAL-513 2308 chr3R 27779260 27779289 chr3R 27779353 27779369 5 92 4.5 7.5 6.0 0.7 109 chr3R 27779260 exon CG34353 - chr3R 27779314 intron CG34353 - chr3R 27779369 intron CG34353 - chr3R_5_27775001 chr3R_27775001 RAL-513 2309 chr3R 27799931 27799964 chr3R 27800025 27800066 11 100 5.5 2.5 4.0 2.2 135 chr3R 27799931 intron CG34353 - chr3R 27799998 intron CG34353 - chr3R 27800066 intron CG34353 - chr3R_11_27795001 chr3R_27795001 RAL-513 2310 chr3R 27856742 27856787 chr3R 27858245 27858290 hopper2 13 1499 3.5 3.5 3.5 2.9 1548 chr3R 27856742 intron CG34353 - chr3R 27857516 intron CG34353 - chr3R 27858290 intron CG34353 - chr3R_13_27855001 chr3R_27855001 RAL-513 2311 chr3R 27862942 27862984 chr3R 27868259 27868308 Transpac 11 5321 5.5 1.5 3.5 2.4 5366 chr3R 27862942 intron CG34353 - chr3R 27865625 intron CG34353 - chr3R 27868308 intron CG34353 - chr3R_11_27865001 chr3R_27865001 RAL-513 2312 chr3R 27871041 27871088 chr3R 27871157 27871209 15 112 2.5 5.0 3.8 3.1 168 chr3R 27871041 intron CG34353 - chr3R 27871125 intron CG34353 - chr3R 27871209 intron CG34353 - chr3R_15_27870001 chr3R_27870001 RAL-513 2313 chr3R 27875679 27875731 chr3R 27882754 27882792 297 21 7069 5.5 5.0 5.2 3.4 7113 chr3R 27875679 intron CG34353 - chr3R 27879236 intron CG34353 - chr3R 27882792 intron CG34353 - chr3R_21_27875001 chr3R_27875001 RAL-513 2314 chr3R 27904021 27904061 chr3R 27904127 27904166 10 103 3.0 3.0 3.0 2.5 145 chr3R 27904021 intron CG34353 - chr3R 27904094 intron CG34353 - chr3R 27904166 intron CG34353 - chr3R_10_27900001 chr3R_27900001 RAL-513 2315 chr3R 27972218 27972258 chr3R 27972326 27972329 6 97 1.5 3.0 2.2 1.9 111 chr3R 27972218 intron betaTub97EF - chr3R 27972274 intron betaTub97EF - chr3R 27972329 intron betaTub97EF - chr3R_6_27970001 chr3R_27970001 RAL-513 2316 chr3R 28039967 28040007 chr3R 28040060 28040099 13 93 4.0 3.5 3.8 2.7 132 chr3R 28039967 intron CG34362 + chr3R 28040033 intron CG34362 + chr3R 28040099 intron CG34362 + chr3R_13_28040001 chr3R_28040001 RAL-513 2317 chr3R 28068486 28068529 chr3R 28073936 28073966 I-element 4 5447 1.0 2.5 1.8 1.4 5480 chr3R 28068486 intron CG34362 + chr3R 28071226 intron CG34362 + chr3R 28073966 intron CG34362 + chr3R_4_28070001 chr3R_28070001 RAL-513 2318 chr3R 28173652 28173699 chr3R 28181102 28181148 mdg1 7 7445 2.0 3.0 2.5 2.0 7496 chr3R 28173652 intron CG34354 + chr3R 28177400 intron CG34354 + chr3R 28181148 intron CG34354 + chr3R_7_28175001 chr3R_28175001 RAL-513 2319 chr3R 28201830 28201844 chr3R 28201924 28201936 4 98 6.0 5.5 5.8 0.6 106 chr3R 28201830 intron CG34354 + chr3R 28201883 intron CG34354 + chr3R 28201936 intron CG34354 + chr3R_4_28200001 chr3R_28200001 RAL-513 2320 chr3R 28253340 28253366 chr3R 28255856 28255886 jockey 7 2517 5.5 8.0 6.8 0.9 2546 chr3R 28253340 intergenic not near genes chr3R 28254613 intergenic not near genes chr3R 28255886 intergenic not near genes chr3R_7_28250001 chr3R_28250001 RAL-513 2321 chr3R 28275160 28275189 chr3R 28275248 28275257 9 84 1.5 3.5 2.5 2.6 97 chr3R 28275160 intergenic not near genes chr3R 28275208 intergenic not near genes chr3R 28275257 intergenic not near genes chr3R_9_28275001 chr3R_28275001 RAL-513 2322 chr3R 28302090 28302122 chr3R 28302549 28302581 jockey 13 456 8.0 6.5 7.2 1.6 491 chr3R 28302090 intergenic not near genes chr3R 28302336 intergenic not near genes chr3R 28302581 intergenic not near genes chr3R_13_28300001 chr3R_28300001 RAL-513 2323 chr3R 28345628 28345674 chr3R 28345724 28345770 7 91 2.5 3.5 3.0 1.8 142 chr3R 28345628 intergenic Moca-cyp + chr3R 28345699 intergenic not near genes chr3R 28345770 intergenic not near genes chr3R_7_28345001 chr3R_28345001 RAL-513 2324 chr3R 28393688 28393691 chr3R 28393808 28393811 4 120 9.5 3.5 6.5 0.5 123 chr3R 28393688 intergenic not near genes chr3R 28393750 intergenic not near genes chr3R 28393811 intergenic not near genes chr3R_4_28390001 chr3R_28390001 RAL-513 2325 chr3R 28393707 28393729 chr3R 28393797 28393848 11 109 2.0 3.0 2.5 3.1 141 chr3R 28393707 intergenic not near genes chr3R 28393778 intergenic not near genes chr3R 28393848 intergenic not near genes chr3R_11_28390001 chr3R_28390001 RAL-513 2326 chr3R 28407689 28407738 chr3R 28407795 28407840 9 101 1.0 3.5 2.2 2.8 151 chr3R 28407689 intergenic not near genes chr3R 28407764 intergenic not near genes chr3R 28407840 intergenic not near genes chr3R_9_28405001 chr3R_28405001 RAL-513 2327 chr3R 28410882 28410890 chr3R 28410983 28410991 5 100 0.5 7.5 4.0 1.0 109 chr3R 28410882 intergenic not near genes chr3R 28410936 intergenic not near genes chr3R 28410991 intergenic not near genes chr3R_5_28410001 chr3R_28410001 RAL-513 2328 chr3R 28480308 28480328 chr3R 28480409 28480429 6 101 2.0 2.5 2.2 1.9 121 chr3R 28480308 intergenic not near genes chr3R 28480368 intergenic not near genes chr3R 28480429 intergenic not near genes chr3R_6_28480001 chr3R_28480001 RAL-513 2329 chr3R 28484354 28484384 chr3R 28486263 28486282 22 1901 53.0 63.0 58.0 0.4 1928 chr3R 28484354 intergenic CG1894 + chr3R 28485318 exon CG1894 + chr3R 28486282 intergenic CG1894 + chr3R_22_28485001 chr3R_28485001 RAL-513 2330 chr3R 28484353 28484395 chr3R 28486284 28486292 10 1906 58.0 47.5 52.8 0.2 1939 chr3R 28484353 intergenic CG1894 + chr3R 28485322 exon CG1894 + chr3R 28486292 intergenic CG1894 + chr3R_10_28485001 chr3R_28485001 RAL-513 2331 chr3R 28505609 28505642 chr3R 28505701 28505705 5 79 3.0 2.5 2.8 1.3 96 chr3R 28505609 intron Dhc98D + chr3R 28505657 intron Dhc98D + chr3R 28505705 intron Dhc98D + chr3R_5_28505001 chr3R_28505001 RAL-513 2332 chr3R 28558188 28558219 chr3R 28558293 28558297 14 102 3.5 3.5 3.5 3.1 109 chr3R 28558188 intergenic not near genes chr3R 28558242 intergenic not near genes chr3R 28558297 intergenic not near genes chr3R_14_28555001 chr3R_28555001 RAL-513 2333 chr3R 28616460 28616499 chr3R 28616572 28616611 11 111 2.5 1.0 1.8 3.9 151 chr3R 28616460 intron CG10011 - chr3R 28616536 intron CG10011 - chr3R 28616611 intron CG10011 - chr3R_11_28615001 chr3R_28615001 RAL-513 2334 chr3R 28643416 28643437 chr3R 28643580 28643610 7 171 2.0 13.0 7.5 0.8 194 chr3R 28643416 intergenic not near genes chr3R 28643513 intergenic not near genes chr3R 28643610 intergenic not near genes chr3R_7_28640001 chr3R_28640001 RAL-513 2335 chr3R 28662385 28662390 chr3R 28662527 28662532 4 150 4.0 3.5 3.8 0.8 147 chr3R 28662385 intergenic not near genes chr3R 28662458 intergenic not near genes chr3R 28662532 intergenic not near genes chr3R_4_28660001 chr3R_28660001 RAL-513 2336 chr3R 28686710 28686749 chr3R 28686812 28686850 13 100 7.0 5.5 6.2 1.8 140 chr3R 28686710 intron CG9990 + chr3R 28686780 intron CG9990 + chr3R 28686850 intron CG9990 + chr3R_13_28685001 chr3R_28685001 RAL-513 2337 chr3R 28736201 28736234 chr3R 28736294 28736335 5 90 3.0 1.0 2.0 1.7 134 chr3R 28736201 intergenic not near genes chr3R 28736268 intergenic not near genes chr3R 28736335 intergenic not near genes chr3R_5_28735001 chr3R_28735001 RAL-513 2338 chr3R 28749510 28749548 chr3R 28749607 28749638 15 102 1.5 4.0 2.8 3.9 128 chr3R 28749510 exon CG10000 - chr3R 28749574 exon CG10000 - chr3R 28749638 intron CG10000 - chr3R_15_28745001 chr3R_28745001 RAL-513 2339 chr3R 28758268 28758304 chr3R 28763905 28763915 roo 4 5624 2.5 0.0 1.2 1.8 5647 chr3R 28758268 intergenic aqrs - chr3R 28761092 intergenic not near genes chr3R 28763915 intergenic not near genes chr3R_4_28760001 chr3R_28760001 RAL-513 2340 chr3R 28763905 28763915 chr3R 28771348 28771352 Stalker4 5 7454 0.0 3.0 1.5 2.0 7447 chr3R 28763905 intergenic not near genes chr3R 28767628 intergenic not near genes chr3R 28771352 intergenic not near genes chr3R_5_28765001 chr3R_28765001 RAL-513 2341 chr3R 28792852 28792897 chr3R 28797965 28797987 jockey 12 5107 3.0 4.5 3.8 2.5 5135 chr3R 28792852 intergenic not near genes chr3R 28795420 intergenic not near genes chr3R 28797987 intergenic not near genes chr3R_12_28795001 chr3R_28795001 RAL-513 2342 chr3R 28830868 28830918 chr3R 28830966 28831016 14 90 4.0 4.5 4.2 2.7 148 chr3R 28830868 intron WASp - chr3R 28830942 intron WASp - chr3R 28831016 intron WASp - chr3R_14_28830001 chr3R_28830001 RAL-513 2343 chr3R 21907534 21907536 chr3R 28831801 28831802 32 6924267 23.0 16.0 19.5 1.6 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_32_25365001 chr3R_25365001 RAL-513 2344 chr3R 28947956 28947979 chr3R 28948088 28948111 7 131 9.0 5.0 7.0 0.9 155 chr3R 28947956 intron CG14521 - chr3R 28948034 intron CG14521 - chr3R 28948111 intron CG14521 - chr3R_7_28945001 chr3R_28945001 RAL-513 2345 chr3R 28947983 28947990 chr3R 28948087 28948118 5 117 6.0 5.0 5.5 0.8 135 chr3R 28947983 intron CG14521 - chr3R 28948050 intron CG14521 - chr3R 28948118 intron CG14521 - chr3R_5_28945001 chr3R_28945001 RAL-513 2346 chr3R 28960495 28960542 chr3R 28960598 28960646 13 99 1.5 3.5 2.5 3.7 151 chr3R 28960495 intron CG14521 - chr3R 28960570 intron CG14521 - chr3R 28960646 intron CG14521 - chr3R_13_28960001 chr3R_28960001 RAL-513 2347 chr3R 21907534 21907536 chr3R 29013340 29013340 8 7105805 23.0 13.5 18.2 0.4 7105806 chr3R 21907534 intergenic CG6678 + chr3R 25460437 intron Fur1 - chr3R 29013340 intron wat - chr3R_8_25460001 chr3R_25460001 RAL-513 2348 chr3R 29019364 29019395 chr3R 29019496 29019522 10 128 1.0 6.0 3.5 2.2 158 chr3R 29019364 intron wat - chr3R 29019443 intron wat - chr3R 29019522 intron wat - chr3R_10_29015001 chr3R_29015001 RAL-513 2349 chr3R 29032723 29032778 chr3R 29032820 29032856 15 86 3.0 4.5 3.8 3.1 133 chr3R 29032723 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032790 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032856 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R_15_29030001 chr3R_29030001 RAL-513 2350 chr3R 29034057 29034097 chr3R 29034461 29034512 4 412 1.5 3.0 2.2 1.2 455 chr3R 29034057 5` UTR CR45044 + chr3R 29034284 intergenic CR45044 +,beta4GalNAcTB -,Cpsf100 + chr3R 29034512 intergenic Cpsf100 +,CR45044 + chr3R_4_29030001 chr3R_29030001 RAL-513 2351 chr3R 29079364 29079407 chr3R 29080756 29080763 NOF 21 1389 3.0 7.5 5.2 3.4 1399 chr3R 29079364 intron CG11873 + chr3R 29080064 intron CG11873 + chr3R 29080763 intron CG11873 + chr3R_21_29080001 chr3R_29080001 RAL-513 2352 chr3R 29177814 29177819 chr3R 29178513 29178525 4 706 3.0 4.0 3.5 0.9 711 chr3R 29177814 intron CG14509 - chr3R 29178170 intron CG14509 - chr3R 29178525 intron CG14509 - chr3R_4_29175001 chr3R_29175001 RAL-513 2353 chr3R 29237236 29237279 chr3R 29239276 29239286 10 2035 14.5 7.5 11.0 0.8 2050 chr3R 29237236 exon CG11951 - chr3R 29238261 intron CG11951 - chr3R 29239286 exon CG31427 - chr3R_10_29235001 chr3R_29235001 RAL-513 2354 chr3R 29237327 29237536 chr3R 29239273 29239433 4 1905 15.5 7.5 11.5 0.3 2106 chr3R 29237327 exon CG11951 - chr3R 29238380 intron CG11951 - chr3R 29239433 exon CG31427 - chr3R_4_29235001 chr3R_29235001 RAL-513 2355 chr3R 29240456 29240497 chr3R 29240559 29240601 9 103 2.5 1.0 1.8 3.2 145 chr3R 29240456 intergenic CG31427 -,CG31445 - chr3R 29240528 intergenic CG31445 -,CG31427 - chr3R 29240601 3` UTR CG31445 - chr3R_9_29240001 chr3R_29240001 RAL-513 2356 chr3R 29249619 29249636 chr3R 29249725 29249742 8 106 3.5 4.5 4.0 1.6 123 chr3R 29249619 intron SP1029 - chr3R 29249680 intron SP1029 - chr3R 29249742 intron SP1029 - chr3R_8_29245001 chr3R_29245001 RAL-513 2357 chr3R 29249640 29249649 chr3R 29249723 29249725 4 93 2.0 4.5 3.2 1.0 85 chr3R 29249640 intron SP1029 - chr3R 29249682 intron SP1029 - chr3R 29249725 intron SP1029 - chr3R_4_29245001 chr3R_29245001 RAL-513 2358 chr3R 29250732 29250774 chr3R 29250838 29250849 15 101 3.0 3.5 3.2 3.6 117 chr3R 29250732 intergenic SP1029 - chr3R 29250790 intergenic SP1029 - chr3R 29250849 intergenic SP1029 - chr3R_15_29250001 chr3R_29250001 RAL-513 2359 chr3R 29264173 29264196 chr3R 29264295 29264318 5 116 1.0 4.5 2.8 1.3 145 chr3R 29264173 intergenic not near genes chr3R 29264246 intergenic not near genes chr3R 29264318 intergenic not near genes chr3R_5_29260001 chr3R_29260001 RAL-513 2360 chr3R 29294889 29294930 chr3R 29294983 29295010 5 93 0.5 5.5 3.0 1.2 121 chr3R 29294889 3` UTR CG14506 - chr3R 29294950 3` UTR CG14506 - chr3R 29295010 3` UTR CG14506 - chr3R_5_29290001 chr3R_29290001 RAL-513 2361 chr3R 29319808 29319858 chr3R 29320147 29320169 jockey 12 329 1.5 4.5 3.0 3.0 361 chr3R 29319808 intergenic Cnx99A - chr3R 29319988 intergenic Cnx99A - chr3R 29320169 intergenic not near genes chr3R_12_29315001 chr3R_29315001 RAL-513 2362 chr3R 29346159 29346195 chr3R 29346269 29346303 12 104 5.5 3.5 4.5 2.2 144 chr3R 29346159 intergenic not near genes chr3R 29346231 intergenic not near genes chr3R 29346303 intergenic not near genes chr3R_12_29345001 chr3R_29345001 RAL-513 2363 chr3R 29453756 29453785 chr3R 29453834 29453881 15 85 1.0 8.0 4.5 2.7 125 chr3R 29453756 intron Ptp99A + chr3R 29453818 intron Ptp99A + chr3R 29453881 intron Ptp99A + chr3R_15_29450001 chr3R_29450001 RAL-513 2364 chr3R 29539415 29539461 chr3R 29539510 29539529 8 87 2.0 1.5 1.8 2.9 114 chr3R 29539415 intergenic not near genes chr3R 29539472 intergenic not near genes chr3R 29539529 intergenic not near genes chr3R_8_29535001 chr3R_29535001 RAL-513 2365 chr3R 29573053 29573077 chr3R 29573238 29573285 7 195 3.0 2.0 2.5 2.0 232 chr3R 29573053 intergenic not near genes chr3R 29573169 intergenic not near genes chr3R 29573285 intergenic not near genes chr3R_7_29570001 chr3R_29570001 RAL-513 2366 chr3R 29627264 29627308 chr3R 29627696 29627696 6 418 5.5 4.5 5.0 1.0 432 chr3R 29627264 intergenic not near genes chr3R 29627480 intergenic not near genes chr3R 29627696 intergenic not near genes chr3R_6_29625001 chr3R_29625001 RAL-513 2367 chr3R 29738252 29738292 chr3R 29739730 29739778 hobo 13 1481 4.5 3.0 3.8 2.7 1526 chr3R 29738252 intergenic CG1969 +,CG7598 + chr3R 29739015 intron CG1969 + chr3R 29739778 5` UTR CG1969 + chr3R_13_29735001 chr3R_29735001 RAL-513 2368 chr3R 29758928 29758971 chr3R 29759023 29759069 18 93 1.5 4.5 3.0 4.5 141 chr3R 29758928 3` UTR CR44953 - chr3R 29758998 3` UTR CR44953 - chr3R 29759069 intergenic CR44953 - chr3R_18_29755001 chr3R_29755001 RAL-513 2369 chr3R 29760367 29760388 chr3R 29761588 29761607 pogo 7 1219 4.5 1.5 3.0 1.8 1240 chr3R 29760367 intergenic not near genes chr3R 29760987 intergenic not near genes chr3R 29761607 intergenic not near genes chr3R_7_29760001 chr3R_29760001 RAL-513 2370 chr3R 29882005 29882026 chr3R 29891182 29891201 roo 4 9176 7.5 4.5 6.0 0.6 9196 chr3R 29882005 intron CG31038 + chr3R 29886603 intron CG31038 + chr3R 29891201 intron CG31038 + chr3R_4_29885001 chr3R_29885001 RAL-513 2371 chr3R 29882032 29882051 chr3R 29891176 29891223 roo 7 9168 6.0 4.5 5.2 1.1 9191 chr3R 29882032 intron CG31038 + chr3R 29886628 intron CG31038 + chr3R 29891223 intron CG31038 + chr3R_7_29885001 chr3R_29885001 RAL-513 2372 chr3R 29950554 29950592 chr3R 29950651 29950683 4 90 4.0 3.0 3.5 0.9 129 chr3R 29950554 intergenic TkR99D - chr3R 29950618 intergenic TkR99D - chr3R 29950683 intergenic TkR99D - chr3R_4_29950001 chr3R_29950001 RAL-513 2373 chr3R 30032152 30032160 chr3R 30032251 30032258 4 98 5.5 3.5 4.5 0.7 106 chr3R 30032152 intron Axn + chr3R 30032205 intron Axn + chr3R 30032258 intron Axn + chr3R_4_30030001 chr3R_30030001 RAL-513 2374 chr3R 30084851 30084880 chr3R 30086317 30086361 hobo 11 1472 1.5 5.0 3.2 2.6 1510 chr3R 30084851 intron sima + chr3R 30085606 intron sima + chr3R 30086361 intron sima + chr3R_11_30085001 chr3R_30085001 RAL-513 2375 chr3R 30097501 30097661 chr3R 30097590 30097798 15 139 3.0 5.5 4.2 2.9 297 chr3R 30097501 intron sima + chr3R 30097650 intron sima + chr3R 30097798 intron sima + chr3R_15_30095001 chr3R_30095001 RAL-513 2376 chr3R 30177725 30177773 chr3R 30177862 30177910 11 126 3.0 4.0 3.5 2.4 185 chr3R 30177725 intergenic CG1983 -,CG15530 + chr3R 30177818 intergenic CG15530 +,CG1983 - chr3R 30177910 5` UTR CG15530 + chr3R_11_30175001 chr3R_30175001 RAL-513 2377 chr3R 30181106 30181134 chr3R 30181177 30181230 11 72 2.5 3.5 3.0 2.8 124 chr3R 30181106 3` UTR Bet5 + chr3R 30181168 3` UTR Bet5 + chr3R 30181230 3` UTR Bet5 + chr3R_11_30180001 chr3R_30180001 RAL-513 2378 chr3R 30183199 30183236 chr3R 30183328 30183335 8 124 3.5 5.5 4.5 1.5 136 chr3R 30183199 intergenic not near genes chr3R 30183267 intergenic not near genes chr3R 30183335 intergenic not near genes chr3R_8_30180001 chr3R_30180001 RAL-513 2379 chr3R 30210594 30210673 chr3R 30210727 30210773 4 107 0.0 5.0 2.5 1.1 179 chr3R 30210594 intergenic Anp +,CecA1 + chr3R 30210684 intergenic CecA1 +,Anp + chr3R 30210773 intergenic CecA1 +,Anp + chr3R_4_30210001 chr3R_30210001 RAL-513 2380 chr3R 30224373 30224418 chr3R 30224480 30224531 15 100 3.5 4.0 3.8 3.1 158 chr3R 30224373 intergenic not near genes chr3R 30224452 intergenic not near genes chr3R 30224531 intergenic not near genes chr3R_15_30220001 chr3R_30220001 RAL-513 2381 chr3R 30238749 30238778 chr3R 30239933 30239937 1360 4 1178 2.0 0.0 1.0 2.0 1188 chr3R 30238749 intergenic not near genes chr3R 30239343 intergenic not near genes chr3R 30239937 intergenic not near genes chr3R_4_30235001 chr3R_30235001 RAL-513 2382 chr3R 30246314 30246336 chr3R 30246384 30246435 5 93 0.0 3.0 1.5 2.0 121 chr3R 30246314 intron CG9733 - chr3R 30246374 intron CG9733 - chr3R 30246435 intron CG9733 - chr3R_5_30245001 chr3R_30245001 RAL-513 2383 chr3R 30317326 30317354 chr3R 30324917 30324935 roo 5 7590 1.0 4.0 2.5 1.4 7609 chr3R 30317326 intron hdc + chr3R 30321130 intron hdc + chr3R 30324935 intron hdc + chr3R_5_30320001 chr3R_30320001 RAL-513 2384 chr3R 30330505 30330523 chr3R 30330569 30330621 7 91 5.0 4.0 4.5 1.3 116 chr3R 30330505 intron hdc + chr3R 30330563 intron hdc + chr3R 30330621 intron hdc + chr3R_7_30330001 chr3R_30330001 RAL-513 2385 chr3R 30375519 30375569 chr3R 30383164 30383214 412 14 7640 3.0 3.5 3.2 3.3 7695 chr3R 30375519 intergenic not near genes chr3R 30379366 intergenic not near genes chr3R 30383214 intergenic not near genes chr3R_14_30375001 chr3R_30375001 RAL-513 2386 chr3R 30396200 30396226 chr3R 30404483 30404512 roo 9 8285 2.5 3.0 2.8 2.4 8312 chr3R 30396200 intergenic not near genes chr3R 30400356 intergenic not near genes chr3R 30404512 5` UTR CR45570 + chr3R_9_30400001 chr3R_30400001 RAL-513 2387 chr3R 30407957 30407987 chr3R 30408487 30408520 13 539 3.0 7.5 5.2 2.1 563 chr3R 30407957 intergenic not near genes chr3R 30408238 intergenic not near genes chr3R 30408520 intergenic not near genes chr3R_13_30405001 chr3R_30405001 RAL-513 2388 chr3R 30445492 30445538 chr3R 30445601 30445615 12 108 4.5 2.0 3.2 2.9 123 chr3R 30445492 intergenic aralar1 -,Osi23 - chr3R 30445554 intergenic aralar1 - chr3R 30445615 intergenic aralar1 - chr3R_12_30445001 chr3R_30445001 RAL-513 2389 chr3R 30456372 30456419 chr3R 30456472 30456519 16 94 2.0 3.0 2.5 4.6 147 chr3R 30456372 intergenic CG2224 - chr3R 30456446 3` UTR CG2224 - chr3R 30456519 3` UTR CG2224 - chr3R_16_30455001 chr3R_30455001 RAL-513 2390 chr3R 30466697 30466727 chr3R 30466797 30466804 11 97 1.0 3.5 2.2 3.4 107 chr3R 30466697 intron PH4alphaEFB + chr3R 30466750 intron PH4alphaEFB + chr3R 30466804 intron PH4alphaEFB + chr3R_11_30465001 chr3R_30465001 RAL-513 2391 chr3R 30480455 30480511 chr3R 30482942 30482968 jockey 15 2480 1.5 5.0 3.2 3.6 2513 chr3R 30480455 intron PH4alphaEFB + chr3R 30481712 intron PH4alphaEFB + chr3R 30482968 intron PH4alphaEFB + chr3R_15_30480001 chr3R_30480001 RAL-513 2392 chr3R 30485021 30485033 chr3R 30485116 30485129 5 96 7.0 4.0 5.5 0.8 108 chr3R 30485021 intron PH4alphaEFB + chr3R 30485075 intron PH4alphaEFB + chr3R 30485129 intron PH4alphaEFB + chr3R_5_30485001 chr3R_30485001 RAL-513 2393 chr3R 30485038 30485068 chr3R 30485115 30485164 9 90 3.0 4.0 3.5 2.0 126 chr3R 30485038 intron PH4alphaEFB + chr3R 30485101 intron PH4alphaEFB + chr3R 30485164 intron PH4alphaEFB + chr3R_9_30485001 chr3R_30485001 RAL-513 2394 chr3R 30548997 30549037 chr3R 30549108 30549149 10 108 6.0 3.5 4.8 1.7 152 chr3R 30548997 intron tmod + chr3R 30549073 intron tmod + chr3R 30549149 intron tmod + chr3R_10_30545001 chr3R_30545001 RAL-513 2395 chr3R 30571692 30571716 chr3R 30571792 30571815 4 97 0.5 3.5 2.0 1.3 123 chr3R 30571692 intron tmod + chr3R 30571754 intron tmod + chr3R 30571815 exon tmod + chr3R_4_30570001 chr3R_30570001 RAL-513 2396 chr3R 30591316 30591338 chr3R 30591435 30591449 6 119 3.0 4.5 3.8 1.2 133 chr3R 30591316 intergenic not near genes chr3R 30591382 intergenic not near genes chr3R 30591449 intergenic not near genes chr3R_6_30590001 chr3R_30590001 RAL-513 2397 chr3R 30627618 30627639 chr3R 30627681 30627692 9 79 6.5 5.0 5.8 1.3 74 chr3R 30627618 exon CG2267 - chr3R 30627655 exon CG2267 - chr3R 30627692 exon CG2267 - chr3R_9_30625001 chr3R_30625001 RAL-513 2398 chr3R 30634192 30634231 chr3R 30634293 30634342 13 101 3.5 5.0 4.2 2.5 150 chr3R 30634192 intergenic not near genes chr3R 30634267 intergenic not near genes chr3R 30634342 intergenic not near genes chr3R_13_30630001 chr3R_30630001 RAL-513 2399 chr3R 30679506 30679510 chr3R 30686988 30686997 blood 4 7485 13.0 7.0 10.0 0.4 7491 chr3R 30679506 intergenic not near genes chr3R 30683252 intergenic not near genes chr3R 30686997 intergenic not near genes chr3R_4_30680001 chr3R_30680001 RAL-513 2400 chr3R 30679512 30679550 chr3R 30686987 30687039 blood 12 7485 6.0 7.0 6.5 1.6 7527 chr3R 30679512 intergenic not near genes chr3R 30683276 intergenic not near genes chr3R 30687039 intergenic not near genes chr3R_12_30680001 chr3R_30680001 RAL-513 2401 chr3R 30700850 30700879 chr3R 30700993 30701022 7 141 4.0 0.5 2.2 2.2 172 chr3R 30700850 intergenic not near genes chr3R 30700936 intergenic not near genes chr3R 30701022 intergenic not near genes chr3R_7_30700001 chr3R_30700001 RAL-513 2402 chr3R 30737928 30737967 chr3R 30738041 30738075 12 110 2.5 2.5 2.5 3.4 147 chr3R 30737928 intergenic not near genes chr3R 30738002 intergenic not near genes chr3R 30738075 intergenic not near genes chr3R_12_30735001 chr3R_30735001 RAL-513 2403 chr3R 30818798 30818833 chr3R 30820383 30820417 1360 11 1582 4.0 4.5 4.2 2.1 1619 chr3R 30818798 intron cindr + chr3R 30819608 intron cindr + chr3R 30820417 intron cindr + chr3R_11_30815001 chr3R_30815001 RAL-513 2404 chr3R 30835665 30835688 chr3R 30835736 30835736 5 72 6.0 3.5 4.8 0.9 71 chr3R 30835665 intron CG15544 + chr3R 30835700 intron CG15544 + chr3R 30835736 intron CG15544 + chr3R_5_30835001 chr3R_30835001 RAL-513 2405 chr3R 30843825 30843859 chr3R 30843955 30843989 9 129 3.5 1.5 2.5 2.6 164 chr3R 30843825 intergenic not near genes chr3R 30843907 intergenic not near genes chr3R 30843989 intergenic not near genes chr3R_9_30840001 chr3R_30840001 RAL-513 2406 chr3R 30900503 30900551 chr3R 30900603 30900651 16 94 4.5 2.0 3.2 3.8 148 chr3R 30900503 exon Cyp4c3 + chr3R 30900577 3` UTR Cyp4c3 + chr3R 30900651 3` UTR Cyp4c3 + chr3R_16_30900001 chr3R_30900001 RAL-513 2407 chr3R 30985667 30985703 chr3R 30985772 30985807 10 102 4.5 3.0 3.8 2.1 140 chr3R 30985667 intron 5-HT7 - chr3R 30985737 intron 5-HT7 - chr3R 30985807 intron 5-HT7 - chr3R_10_30985001 chr3R_30985001 RAL-513 2408 chr3R 30993646 30993657 chr3R 30993747 30993758 4 101 3.5 6.0 4.8 0.7 112 chr3R 30993646 intron 5-HT7 - chr3R 30993702 intron 5-HT7 - chr3R 30993758 intron 5-HT7 - chr3R_4_30990001 chr3R_30990001 RAL-513 2409 chr3R 30996629 30996663 chr3R 30996858 30996907 11 234 2.5 4.5 3.5 2.4 278 chr3R 30996629 intron 5-HT7 - chr3R 30996768 intron 5-HT7 - chr3R 30996907 intron 5-HT7 - chr3R_11_30995001 chr3R_30995001 RAL-513 2410 chr3R 31001225 31001268 chr3R 31001327 31001348 12 97 5.0 4.5 4.8 2.1 123 chr3R 31001225 intron 5-HT7 - chr3R 31001286 intron 5-HT7 - chr3R 31001348 intron 5-HT7 - chr3R_12_31000001 chr3R_31000001 RAL-513 2411 chr3R 31029682 31029725 chr3R 31029783 31029823 13 94 3.0 6.0 4.5 2.4 141 chr3R 31029682 intergenic not near genes chr3R 31029752 intergenic not near genes chr3R 31029823 intergenic not near genes chr3R_13_31025001 chr3R_31025001 RAL-513 2412 chr3R 31049464 31049517 chr3R 31049575 31049595 15 106 5.5 6.5 6.0 2.1 131 chr3R 31049464 intron Aph-4 + chr3R 31049530 intron Aph-4 + chr3R 31049595 intron Aph-4 + chr3R_15_31045001 chr3R_31045001 RAL-513 2413 chr3R 31074220 31074261 chr3R 31081837 31081884 springer 5 7617 2.5 0.5 1.5 2.0 7664 chr3R 31074220 intron Sox100B + chr3R 31078052 intron Sox100B + chr3R 31081884 intron Sox100B + chr3R_5_31075001 chr3R_31075001 RAL-513 2414 chr3R 31105222 31105225 chr3R 31105481 31105502 4 272 7.5 9.0 8.2 0.4 280 chr3R 31105222 intergenic not near genes chr3R 31105362 intergenic not near genes chr3R 31105502 intergenic not near genes chr3R_4_31105001 chr3R_31105001 RAL-513 2415 chr3R 31105230 31105242 chr3R 31105475 31105481 4 250 4.5 7.0 5.8 0.6 251 chr3R 31105230 intergenic not near genes chr3R 31105356 intergenic not near genes chr3R 31105481 intergenic not near genes chr3R_4_31105001 chr3R_31105001 RAL-513 2416 chr3R 31137145 31137184 chr3R 31137239 31137285 12 96 6.5 6.0 6.2 1.7 140 chr3R 31137145 intron Gycbeta100B + chr3R 31137215 intron Gycbeta100B + chr3R 31137285 intron Gycbeta100B + chr3R_12_31135001 chr3R_31135001 RAL-513 2417 chr3R 31220137 31220139 chr3R 31220602 31220618 4 475 0.0 2.0 1.0 2.0 481 chr3R 31220137 intergenic not near genes chr3R 31220378 intergenic CG12054 + chr3R 31220618 intergenic CG12054 + chr3R_4_31220001 chr3R_31220001 RAL-513 2418 chr3R 31220140 31220173 chr3R 31220599 31220649 8 473 0.0 2.0 1.0 4.0 509 chr3R 31220140 intergenic not near genes chr3R 31220394 intergenic CG12054 + chr3R 31220649 intergenic CG12054 + chr3R_8_31220001 chr3R_31220001 RAL-513 2419 chr3R 31245758 31245786 chr3R 31245865 31245893 4 102 8.0 3.5 5.8 0.6 135 chr3R 31245758 intron qless - chr3R 31245826 intron qless - chr3R 31245893 intron qless - chr3R_4_31245001 chr3R_31245001 RAL-513 2420 chr3R 31279371 31279409 chr3R 31285565 31285587 diver 14 6201 5.0 3.0 4.0 2.8 6216 chr3R 31279371 intergenic not near genes chr3R 31282479 intergenic not near genes chr3R 31285587 intergenic not near genes chr3R_14_31280001 chr3R_31280001 RAL-513 2421 chr3R 31413084 31413091 chr3R 31418291 31418308 copia 4 5212 6.5 2.5 4.5 0.7 5224 chr3R 31413084 intron Gprk2 + chr3R 31415696 intron Gprk2 + chr3R 31418308 intron Gprk2 + chr3R_4_31415001 chr3R_31415001 RAL-513 2422 chr3R 31413095 31413120 chr3R 31418290 31418318 copia 6 5205 4.0 2.5 3.2 1.4 5223 chr3R 31413095 intron Gprk2 + chr3R 31415706 intron Gprk2 + chr3R 31418318 intron Gprk2 + chr3R_6_31415001 chr3R_31415001 RAL-513 2423 chr3R 31422526 31422557 chr3R 31422635 31422644 8 103 5.0 9.0 7.0 1.0 118 chr3R 31422526 intron Gprk2 + chr3R 31422585 intron Gprk2 + chr3R 31422644 intron Gprk2 + chr3R_8_31420001 chr3R_31420001 RAL-513 2424 chr3R 31426861 31426911 chr3R 31426973 31427014 9 107 5.0 3.5 4.2 1.7 153 chr3R 31426861 intron Gprk2 + chr3R 31426938 intron Gprk2 + chr3R 31427014 intron Gprk2 + chr3R_9_31425001 chr3R_31425001 RAL-513 2425 chr3R 31435343 31435390 chr3R 31435513 31435561 8 170 4.5 1.5 3.0 2.0 218 chr3R 31435343 intron Gprk2 + chr3R 31435452 intron Gprk2 + chr3R 31435561 intron Gprk2 + chr3R_8_31435001 chr3R_31435001 RAL-513 2426 chr3R 31442251 31442297 chr3R 31442356 31442402 15 99 4.5 4.0 4.2 2.9 151 chr3R 31442251 intron Gprk2 + chr3R 31442326 intron Gprk2 + chr3R 31442402 intron Gprk2 + chr3R_15_31440001 chr3R_31440001 RAL-513 2427 chr3R 31448587 31448624 chr3R 31448682 31448695 9 91 7.5 5.0 6.2 1.2 108 chr3R 31448587 intron Gprk2 + chr3R 31448641 intron Gprk2 + chr3R 31448695 intron Gprk2 + chr3R_9_31445001 chr3R_31445001 RAL-513 2428 chr3R 31539322 31539351 chr3R 31539427 31539456 10 101 4.0 7.0 5.5 1.5 134 chr3R 31539322 intergenic not near genes chr3R 31539389 intergenic not near genes chr3R 31539456 intergenic not near genes chr3R_10_31535001 chr3R_31535001 RAL-513 2429 chr3R 31539843 31539885 chr3R 31539948 31539989 12 102 4.0 3.5 3.8 2.5 146 chr3R 31539843 intergenic not near genes chr3R 31539916 intergenic not near genes chr3R 31539989 intergenic not near genes chr3R_12_31535001 chr3R_31535001 RAL-513 2430 chr3R 31691513 31691564 chr3R 31696296 31696315 Doc 15 4777 3.0 5.0 4.0 3.0 4802 chr3R 31691513 intergenic not near genes chr3R 31693914 intergenic not near genes chr3R 31696315 intergenic not near genes chr3R_15_31690001 chr3R_31690001 RAL-513 2431 chr3R 31718538 31718559 chr3R 31718612 31718623 6 72 4.5 5.0 4.8 1.0 85 chr3R 31718538 intron ttk + chr3R 31718580 intron ttk + chr3R 31718623 intron ttk + chr3R_6_31715001 chr3R_31715001 RAL-513 2432 chr3R 31820545 31820556 chr3R 31820636 31820644 7 89 7.0 9.5 8.2 0.8 99 chr3R 31820545 intron RhoGAP100F + chr3R 31820594 intron RhoGAP100F + chr3R 31820644 intron RhoGAP100F + chr3R_7_31820001 chr3R_31820001 RAL-513 2433 chr3R 31820560 31820575 chr3R 31820630 31820673 6 81 4.5 8.5 6.5 0.8 113 chr3R 31820560 intron RhoGAP100F + chr3R 31820616 intron RhoGAP100F + chr3R 31820673 intron RhoGAP100F + chr3R_6_31820001 chr3R_31820001 RAL-513 2434 chr3R 31876185 31876209 chr3R 31876250 31876261 6 67 3.5 3.5 3.5 1.3 76 chr3R 31876185 intron heph - chr3R 31876223 intron heph - chr3R 31876261 intron heph - chr3R_6_31875001 chr3R_31875001 RAL-513 2435 chr3R 31961345 31961368 chr3R 31961423 31961471 8 88 2.0 3.0 2.5 2.3 126 chr3R 31961345 intron heph - chr3R 31961408 intron heph - chr3R 31961471 intron heph - chr3R_8_31960001 chr3R_31960001 RAL-513 2436 chr3R 31962071 31962090 chr3R 31962383 31962415 4 322 4.5 1.0 2.8 1.1 344 chr3R 31962071 intron heph - chr3R 31962243 intron heph - chr3R 31962415 intron heph - chr3R_4_31960001 chr3R_31960001 RAL-513 2437 chr3R 31976540 31976566 chr3R 31976841 31976867 6 297 0.5 0.5 0.5 4.0 327 chr3R 31976540 intron heph - chr3R 31976704 intron heph - chr3R 31976867 intron heph - chr3R_6_31975001 chr3R_31975001 RAL-513 2438 chr3R 31997977 31998025 chr3R 32005462 32005468 blood 15 7483 7.0 4.5 5.8 2.2 7491 chr3R 31997977 intron heph - chr3R 32001722 intron heph - chr3R 32005468 intron heph - chr3R_15_32000001 chr3R_32000001 RAL-513 2439 chr3R 32014825 32014868 chr3R 32015118 32015157 10 288 7.0 5.0 6.0 1.4 332 chr3R 32014825 5` UTR heph - chr3R 32014991 5` UTR heph - chr3R 32015157 5` UTR heph - chr3R_10_32010001 chr3R_32010001 RAL-513 2440 chr4 76478 76501 chr4 81940 81963 I-element 6 5458 5.0 6.5 5.8 0.9 5485 chr4 76478 intron pan + chr4 79220 intron pan + chr4 81963 intron pan + chr4_6_75001 chr4_75001 RAL-513 2441 chr4 135223 135247 chr4 135423 135448 5 200 2.5 5.5 4.0 1.0 225 chr4 135223 intron CG32000 + chr4 135336 intron CG32000 + chr4 135448 intron CG32000 + chr4_5_135001 chr4_135001 RAL-513 2442 chr4 189380 189399 chr4 189477 189498 5 98 2.0 2.0 2.0 1.7 118 chr4 189380 intron CG2316 - chr4 189439 intron CG2316 - chr4 189498 intron CG2316 - chr4_5_185001 chr4_185001 RAL-513 2443 chr4 280786 280836 chr4 281435 281464 5 645 3.0 4.0 3.5 1.1 678 chr4 280786 intron Syt7 - chr4 281125 intron Syt7 - chr4 281464 intron Syt7 - chr4_5_280001 chr4_280001 RAL-513 2444 chr4 319970 320017 chr4 328166 328203 Stalker2 5 8193 2.0 0.5 1.2 2.3 8233 chr4 319970 3` UTR CG32850 + chr4 324086 intron CG32850 + chr4 328203 3` UTR,3` UTR CG32850 +,PMCA - chr4_5_320001 chr4_320001 RAL-513 2445 chr4 368682 368709 chr4 368834 368860 4 152 1.5 3.0 2.2 1.2 178 chr4 368682 intron Hcf + chr4 368771 intron Hcf + chr4 368860 intron Hcf + chr4_4_365001 chr4_365001 RAL-513 2446 chr4 671593 671627 chr4 680195 680230 Tirant 13 8600 4.0 9.0 6.5 1.7 8637 chr4 671593 intron CG11360 + chr4 675912 intron CG11360 + chr4 680230 intron CG11360 + chr4_13_675001 chr4_675001 RAL-513 2447 chr4 959608 959655 chr4 959806 959818 14 196 1.5 5.5 3.5 3.1 210 chr4 959608 intergenic CR44030 +,CR45201 - chr4 959713 5` UTR CR44030 + chr4 959818 5` UTR CR44030 + chr4_14_955001 chr4_955001 RAL-513 2448 chr4 972486 972527 chr4 972587 972627 5 101 1.5 5.0 3.2 1.2 141 chr4 972486 intron fuss - chr4 972556 intron fuss - chr4 972627 intron fuss - chr4_5_970001 chr4_970001 RAL-513 2449 chrX 188380 188426 chrX 188476 188504 8 88 2.0 1.5 1.8 2.9 124 chrX 188380 intron tyn + chrX 188442 intron tyn + chrX 188504 intron tyn + chrX_8_185001 chrX_185001 RAL-513 2450 chrX 295868 295881 chrX 303507 303521 412 7 7639 6.0 13.0 9.5 0.7 7653 chrX 295868 intron CG3777 + chrX 299694 intron CG3777 + chrX 303521 intron CG3777 + chrX_7_295001 chrX_295001 RAL-513 2451 chrX 318464 318498 chrX 323568 323604 flea 6 5105 5.0 5.0 5.0 1.0 5140 chrX 318464 intron,intron CG3777 +,CG32816 - chrX 321034 intron,intron CG3777 +,CG32816 - chrX 323604 intron,intron CG3777 +,CG32816 - chrX_6_320001 chrX_320001 RAL-513 2452 chrX 428401 428420 chrX 434605 434608 3S18 4 6196 6.5 1.5 4.0 0.8 6207 chrX 428401 intron CG32816 - chrX 431504 intron CG32816 - chrX 434608 intron CG32816 - chrX_4_430001 chrX_430001 RAL-513 2453 chrX 440978 441023 chrX 441076 441101 15 96 2.5 2.0 2.2 4.7 123 chrX 440978 intron CG32816 - chrX 441040 intron CG32816 - chrX 441101 intron CG32816 - chrX_15_440001 chrX_440001 RAL-513 2454 chrX 450356 450394 chrX 450454 450492 9 96 4.5 3.5 4.0 1.8 136 chrX 450356 intron CG32816 - chrX 450424 intron CG32816 - chrX 450492 intron CG32816 - chrX_9_450001 chrX_450001 RAL-513 2455 chrX 494600 494638 chrX 494700 494717 8 100 5.0 5.0 5.0 1.3 117 chrX 494600 intergenic CG17778 + chrX 494658 5` UTR CG17778 + chrX 494717 intron CG17778 + chrX_8_490001 chrX_490001 RAL-513 2456 chrX 547613 547662 chrX 547877 547908 14 257 5.0 4.0 4.5 2.5 295 chrX 547613 intron Appl + chrX 547760 intron Appl + chrX 547908 intron Appl + chrX_14_545001 chrX_545001 RAL-513 2457 chrX 550736 550783 chrX 551335 551364 11 589 3.5 2.0 2.8 2.9 628 chrX 550736 intron Appl + chrX 551050 intron Appl + chrX 551364 intron Appl + chrX_11_550001 chrX_550001 RAL-513 2458 chrX 551406 551453 chrX 558988 559018 412 7 7570 6.5 5.0 5.8 1.0 7612 chrX 551406 intron Appl + chrX 555212 intron Appl + chrX 559018 intron Appl + chrX_7_555001 chrX_555001 RAL-513 2459 chrX 718315 718359 chrX 718413 718458 7 99 2.5 1.5 2.0 2.3 143 chrX 718315 intron sdk + chrX 718386 intron sdk + chrX 718458 intron sdk + chrX_7_715001 chrX_715001 RAL-513 2460 chrX 778105 778160 chrX 778215 778269 11 103 5.5 0.0 2.8 2.9 164 chrX 778105 intron fz3 + chrX 778187 intron fz3 + chrX 778269 intron fz3 + chrX_11_775001 chrX_775001 RAL-513 2461 chrX 806768 806814 chrX 806884 806914 7 108 3.0 2.0 2.5 2.0 146 chrX 806768 intron Sec22 + chrX 806841 intron Sec22 + chrX 806914 intron Sec22 + chrX_7_805001 chrX_805001 RAL-513 2462 chrX 826364 826417 chrX 826545 826570 9 173 3.0 2.5 2.8 2.4 206 chrX 826364 intron CG43867 - chrX 826467 intron CG43867 - chrX 826570 intron CG43867 - chrX_9_825001 chrX_825001 RAL-513 2463 chrX 827592 827601 chrX 835403 835413 roo 4 7811 6.0 0.0 3.0 1.0 7821 chrX 827592 intron CG43867 - chrX 831502 intron CG43867 - chrX 835413 intron CG43867 - chrX_4_830001 chrX_830001 RAL-513 2464 chrX 827612 827634 chrX 835394 835466 roo 5 7810 1.0 0.0 0.5 3.3 7854 chrX 827612 intron CG43867 - chrX 831539 intron CG43867 - chrX 835466 intron CG43867 - chrX_5_830001 chrX_830001 RAL-513 2465 chrX 906681 906724 chrX 908490 908516 S-element 15 1804 4.5 6.5 5.5 2.3 1835 chrX 906681 intron CG43867 - chrX 907598 intron CG43867 - chrX 908516 intron CG43867 - chrX_15_905001 chrX_905001 RAL-513 2466 chrX 1053117 1053120 chrX 16983076 16983077 8 15929957 10.5 15.5 13.0 0.6 15929960 chrX 1053117 intron CR44779 + chrX 9018097 intron,intron rdgA +,CR43836 - chrX 16983077 intron CG45002 - chrX_8_9015001 chrX_9015001 RAL-513 2467 chrX 1185546 1185594 chrX 1185645 1185674 11 97 1.5 3.0 2.2 3.4 128 chrX 1185546 intron CG14626 + chrX 1185610 intron CG14626 + chrX 1185674 intron CG14626 + chrX_11_1185001 chrX_1185001 RAL-513 2468 chrX 1357784 1357803 chrX 1367942 1367964 Doc 9 10182 3.5 2.5 3.0 2.2 10180 chrX 1357784 intergenic png - chrX 1362874 intergenic not near genes chrX 1367964 intergenic not near genes chrX_9_1360001 chrX_1360001 RAL-513 2469 chrX 1428576 1428624 chrX 1428682 1428712 15 101 2.0 6.0 4.0 3.0 136 chrX 1428576 intron futsch + chrX 1428644 intron futsch + chrX 1428712 intron futsch + chrX_15_1425001 chrX_1425001 RAL-513 2470 chrX 1560646 1560665 chrX 1560753 1560776 6 108 2.0 3.0 2.5 1.7 130 chrX 1560646 intron Mur2B - chrX 1560711 intron Mur2B - chrX 1560776 intron Mur2B - chrX_6_1560001 chrX_1560001 RAL-513 2471 chrX 1930528 1930566 chrX 1938117 1938157 opus 6 7583 0.5 1.5 1.0 3.0 7629 chrX 1930528 intergenic CG11596 + chrX 1934342 intergenic not near genes chrX 1938157 3` UTR CG3857 - chrX_6_1930001 chrX_1930001 RAL-513 2472 chrX 1987468 1987503 chrX 1987592 1987627 5 121 5.0 3.5 4.2 1.0 159 chrX 1987468 intron Hr4 + chrX 1987548 intron Hr4 + chrX 1987627 intron Hr4 + chrX_5_1985001 chrX_1985001 RAL-513 2473 chrX 2146646 2146686 chrX 2146745 2146797 5 107 4.0 4.0 4.0 1.0 151 chrX 2146646 intron Pgd + chrX 2146722 intron Pgd + chrX 2146797 intron Pgd + chrX_5_2145001 chrX_2145001 RAL-513 2474 chrX 2385718 2385754 chrX 2385811 2385852 7 96 2.5 1.0 1.8 2.5 134 chrX 2385718 exon PsGEF - chrX 2385785 intron PsGEF - chrX 2385852 intron PsGEF - chrX_7_2385001 chrX_2385001 RAL-513 2475 chrX 2578803 2578837 chrX 2578927 2578961 17 117 2.5 7.0 4.8 2.9 158 chrX 2578803 intergenic Pdfr +,Vha36-3 - chrX 2578882 intergenic Vha36-3 -,Pdfr + chrX 2578961 intergenic Vha36-3 -,Pdfr + chrX_17_2575001 chrX_2575001 RAL-513 2476 chrX 2610373 2610413 chrX 2617509 2617550 HMS-Beagle 4 7136 3.5 0.5 2.0 1.3 7177 chrX 2610373 intergenic CG8636 - chrX 2613962 intergenic not near genes chrX 2617550 intergenic Tsp3A - chrX_4_2610001 chrX_2610001 RAL-513 2477 chrX 2664386 2664402 chrX 2665551 2665568 1360 6 1165 4.5 7.5 6.0 0.9 1182 chrX 2664386 intron sgg + chrX 2664977 intron sgg + chrX 2665568 intron sgg + chrX_6_2660001 chrX_2660001 RAL-513 2478 chrX 2664403 2664416 chrX 2665540 2665582 1360 5 1160 3.5 5.5 4.5 0.9 1179 chrX 2664403 intron sgg + chrX 2664992 intron sgg + chrX 2665582 intron sgg + chrX_5_2660001 chrX_2660001 RAL-513 2479 chrX 2844881 2844926 chrX 2852310 2852356 mdg1 8 7428 3.5 3.5 3.5 1.8 7475 chrX 2844881 intron kirre + chrX 2848618 intron kirre + chrX 2852356 intron kirre + chrX_8_2845001 chrX_2845001 RAL-513 2480 chrX 3058019 3058041 chrX 3058272 3058302 pogo 4 259 3.0 3.0 3.0 1.0 283 chrX 3058019 intron kirre + chrX 3058160 intron kirre + chrX 3058302 intron kirre + chrX_4_3055001 chrX_3055001 RAL-513 2481 chrX 3075630 3075637 chrX 3080956 3080963 Transpac 4 5326 4.5 6.0 5.2 0.6 5333 chrX 3075630 intron kirre + chrX 3078296 intron kirre + chrX 3080963 intron kirre + chrX_4_3075001 chrX_3075001 RAL-513 2482 chrX 3075640 3075658 chrX 3080943 3080984 Transpac 4 5320 2.5 5.0 3.8 0.8 5344 chrX 3075640 intron kirre + chrX 3078312 intron kirre + chrX 3080984 intron kirre + chrX_4_3075001 chrX_3075001 RAL-513 2483 chrX 3243631 3243654 chrX 3243717 3243741 7 98 1.0 1.5 1.2 3.2 110 chrX 3243631 intron dnc + chrX 3243686 intron dnc + chrX 3243741 intron dnc + chrX_7_3240001 chrX_3240001 RAL-513 2484 chrX 3493073 3493122 chrX 3502252 3502255 roo 9 9171 4.0 1.5 2.8 2.4 9182 chrX 3493073 intron,intron CR44999 +,Gas8 - chrX 3497664 intron,intron CR44999 +,Gas8 - chrX 3502255 intron,intron CR44999 +,Gas8 - chrX_9_3495001 chrX_3495001 RAL-513 2485 chrX 3597095 3597129 chrX 3597203 3597205 6 102 1.5 5.0 3.2 1.4 110 chrX 3597095 intron AstA-R1 + chrX 3597150 intron AstA-R1 + chrX 3597205 intron AstA-R1 + chrX_6_3595001 chrX_3595001 RAL-513 2486 chrX 3597532 3597581 chrX 3619720 3619748 roo 6 22178 5.0 2.5 3.8 1.2 22216 chrX 3597532 intron AstA-R1 + chrX 3608640 intron AstA-R1 + chrX 3619748 intron AstA-R1 + chrX_6_3605001 chrX_3605001 RAL-513 2487 chrX 3629832 3629883 chrX 3629934 3629988 11 104 1.5 0.0 0.8 6.1 156 chrX 3629832 intron AstA-R1 + chrX 3629910 intron AstA-R1 + chrX 3629988 intron AstA-R1 + chrX_11_3625001 chrX_3625001 RAL-513 2488 chrX 3630527 3630572 chrX 3630623 3630668 10 90 2.0 3.0 2.5 2.9 141 chrX 3630527 intron AstA-R1 + chrX 3630598 intron AstA-R1 + chrX 3630668 intron AstA-R1 + chrX_10_3630001 chrX_3630001 RAL-513 2489 chrX 3657405 3657446 chrX 3657492 3657528 12 92 3.5 4.0 3.8 2.5 123 chrX 3657405 intron AstA-R1 + chrX 3657466 intron AstA-R1 + chrX 3657528 intron AstA-R1 + chrX_12_3655001 chrX_3655001 RAL-513 2490 chrX 3713094 3713137 chrX 3713211 3713261 7 124 3.5 2.0 2.8 1.8 167 chrX 3713094 intron Rala - chrX 3713178 intron Rala - chrX 3713261 intron Rala - chrX_7_3710001 chrX_3710001 RAL-513 2491 chrX 3726747 3726782 chrX 3730165 3730199 NOF 7 3417 6.5 6.5 6.5 0.9 3452 chrX 3726747 intron tlk + chrX 3728473 intron tlk + chrX 3730199 intron tlk + chrX_7_3725001 chrX_3725001 RAL-513 2492 chrX 3817571 3817600 chrX 3817657 3817676 4 86 2.0 2.5 2.2 1.2 105 chrX 3817571 intron ec + chrX 3817624 intron ec + chrX 3817676 intron ec + chrX_4_3815001 chrX_3815001 RAL-513 2493 chrX 3840231 3840252 chrX 3840332 3840353 4 100 8.0 3.5 5.8 0.6 122 chrX 3840231 intron ec + chrX 3840292 intron ec + chrX 3840353 intron ec + chrX_4_3840001 chrX_3840001 RAL-513 2494 chrX 3862797 3862844 chrX 3862901 3862947 11 104 2.0 1.5 1.8 3.9 150 chrX 3862797 intergenic yin - chrX 3862872 intergenic yin - chrX 3862947 intergenic yin - chrX_11_3860001 chrX_3860001 RAL-513 2495 chrX 3866100 3866122 chrX 3866189 3866220 8 96 5.0 0.0 2.5 2.3 120 chrX 3866100 intron yin - chrX 3866160 intron yin - chrX 3866220 intron yin - chrX_8_3865001 chrX_3865001 RAL-513 2496 chrX 3880470 3880484 chrX 3880564 3880588 4 102 2.0 3.5 2.8 1.1 118 chrX 3880470 intergenic VhaAC39-1 + chrX 3880529 intergenic VhaAC39-1 + chrX 3880588 intergenic VhaAC39-1 + chrX_4_3880001 chrX_3880001 RAL-513 2497 chrX 3881253 3881290 chrX 3881411 3881448 11 156 7.0 2.5 4.8 1.9 195 chrX 3881253 intron VhaAC39-1 + chrX 3881350 intron VhaAC39-1 + chrX 3881448 intron VhaAC39-1 + chrX_11_3880001 chrX_3880001 RAL-513 2498 chrX 3950780 3950817 chrX 3950880 3950917 4 100 2.5 5.0 3.8 0.8 137 chrX 3950780 intron Vap-33A + chrX 3950848 intron Vap-33A + chrX 3950917 intron Vap-33A + chrX_4_3950001 chrX_3950001 RAL-513 2499 chrX 3986862 3986894 chrX 3994514 3994532 412 7 7649 5.0 3.5 4.2 1.3 7670 chrX 3986862 intergenic not near genes chrX 3990697 intergenic not near genes chrX 3994532 intergenic not near genes chrX_7_3990001 chrX_3990001 RAL-513 2500 chrX 4157882 4157922 chrX 4164937 4164965 297 11 7049 2.0 1.0 1.5 4.4 7083 chrX 4157882 intron Fas2 - chrX 4161424 intron Fas2 - chrX 4164965 intron Fas2 - chrX_11_4160001 chrX_4160001 RAL-513 2501 chrX 4203495 4203545 chrX 4203595 4203634 7 94 1.5 4.0 2.8 1.8 139 chrX 4203495 intron Fas2 - chrX 4203564 intron Fas2 - chrX 4203634 intron Fas2 - chrX_7_4200001 chrX_4200001 RAL-513 2502 chrX 4252932 4252941 chrX 4253040 4253044 5 107 12.0 2.5 7.2 0.6 112 chrX 4252932 intergenic CG15576 - chrX 4252988 intergenic CG15576 - chrX 4253044 intergenic CG15576 - chrX_5_4250001 chrX_4250001 RAL-513 2503 chrX 4252947 4252978 chrX 4253034 4253075 8 97 7.0 2.0 4.5 1.5 128 chrX 4252947 intergenic CG15576 - chrX 4253011 intergenic CG15576 - chrX 4253075 intergenic CG15576 - chrX_8_4250001 chrX_4250001 RAL-513 2504 chrX 4293144 4293160 chrX 4293355 4293362 5 210 0.5 0.5 0.5 3.3 218 chrX 4293144 intergenic not near genes chrX 4293253 intergenic not near genes chrX 4293362 intergenic not near genes chrX_5_4290001 chrX_4290001 RAL-513 2505 chrX 4515826 4515831 chrX 4515923 4515929 4 98 4.0 3.0 3.5 0.9 103 chrX 4515826 intron CR32773 - chrX 4515878 intron CR32773 - chrX 4515929 intron CR32773 - chrX_4_4515001 chrX_4515001 RAL-513 2506 chrX 4515835 4515853 chrX 4515914 4515931 5 85 1.0 2.5 1.8 1.8 96 chrX 4515835 intron CR32773 - chrX 4515883 intron CR32773 - chrX 4515931 intron CR32773 - chrX_5_4515001 chrX_4515001 RAL-513 2507 chrX 4700402 4700426 chrX 4700738 4700776 jockey 8 349 2.5 1.5 2.0 2.7 374 chrX 4700402 3` UTR ctp + chrX 4700589 3` UTR ctp + chrX 4700776 3` UTR ctp + chrX_8_4700001 chrX_4700001 RAL-513 2508 chrX 4723554 4723579 chrX 4723654 4723674 4 97 2.5 3.0 2.8 1.1 120 chrX 4723554 exon Proc-R + chrX 4723614 intron Proc-R + chrX 4723674 intron Proc-R + chrX_4_4720001 chrX_4720001 RAL-513 2509 chrX 4731797 4731809 chrX 4736907 4736922 jockey 4 5112 10.5 3.0 6.8 0.5 5125 chrX 4731797 intergenic not near genes chrX 4734360 intergenic not near genes chrX 4736922 intergenic not near genes chrX_4_4730001 chrX_4730001 RAL-513 2510 chrX 4763237 4763269 chrX 4763744 4763774 Stalker4 6 507 4.5 3.0 3.8 1.2 537 chrX 4763237 intergenic not near genes chrX 4763506 intergenic not near genes chrX 4763774 intergenic not near genes chrX_6_4760001 chrX_4760001 RAL-513 2511 chrX 4827990 4827998 chrX 4835345 4835354 Stalker4 4 7354 3.0 5.0 4.0 0.8 7364 chrX 4827990 intergenic not near genes chrX 4831672 intergenic not near genes chrX 4835354 intergenic not near genes chrX_4_4830001 chrX_4830001 RAL-513 2512 chrX 4871217 4871230 chrX 4871307 4871350 8 115 3.0 1.5 2.2 2.5 133 chrX 4871217 intron CG42594 + chrX 4871284 intron CG42594 + chrX 4871350 intron CG42594 + chrX_8_4870001 chrX_4870001 RAL-513 2513 chrX 4931330 4931333 chrX 4931444 4931447 4 114 25.0 19.5 22.2 0.2 117 chrX 4931330 intron CG44774 - chrX 4931388 intron CG44774 - chrX 4931447 intron CG44774 - chrX_4_4930001 chrX_4930001 RAL-513 2514 chrX 4931335 4931379 chrX 4931439 4931485 17 108 17.0 18.5 17.8 0.9 150 chrX 4931335 intron CG44774 - chrX 4931410 intron CG44774 - chrX 4931485 intron CG44774 - chrX_17_4930001 chrX_4930001 RAL-513 2515 chrX 4946561 4946605 chrX 4946660 4946695 14 92 4.0 2.5 3.2 3.3 134 chrX 4946561 intron Ptp4E + chrX 4946628 intron Ptp4E + chrX 4946695 intron Ptp4E + chrX_14_4945001 chrX_4945001 RAL-513 2516 chrX 4990021 4990044 chrX 4997256 4997277 roo 9 7233 3.0 1.0 2.0 3.0 7256 chrX 4990021 intron CR44833 - chrX 4993649 intron CR44833 - chrX 4997277 intron CR44833 - chrX_9_4990001 chrX_4990001 RAL-513 2517 chrX 5096261 5096306 chrX 5103846 5103890 springer 9 7584 2.5 4.5 3.5 2.0 7629 chrX 5096261 intron,intron CG15465 +,rg + chrX 5100076 intron,intron CG15465 +,rg + chrX 5103890 intron,intron CG15465 +,rg + chrX_9_5100001 chrX_5100001 RAL-513 2518 chrX 5134792 5134823 chrX 5134898 5134944 9 107 1.5 1.5 1.5 3.6 152 chrX 5134792 intron,intron CG15465 +,rg + chrX 5134868 intron,intron CG15465 +,rg + chrX 5134944 intron,intron CG15465 +,rg + chrX_9_5130001 chrX_5130001 RAL-513 2519 chrX 5159709 5159747 chrX 5159824 5159844 6 112 1.5 1.0 1.2 2.7 135 chrX 5159709 intron,intron CG15465 +,rg + chrX 5159776 intron,intron CG15465 +,rg + chrX 5159844 intron,intron CG15465 +,rg + chrX_6_5155001 chrX_5155001 RAL-513 2520 chrX 5272815 5272848 chrX 5272917 5272955 6 105 2.0 2.5 2.2 1.9 140 chrX 5272815 intergenic not near genes chrX 5272885 intergenic not near genes chrX 5272955 intergenic not near genes chrX_6_5270001 chrX_5270001 RAL-513 2521 chrX 5338687 5338722 chrX 5339960 5339993 jockey 6 1272 2.5 2.0 2.2 1.9 1306 chrX 5338687 intergenic not near genes chrX 5339340 intergenic not near genes chrX 5339993 intergenic SK + chrX_6_5335001 chrX_5335001 RAL-513 2522 chrX 5349279 5349305 chrX 5349375 5349402 5 93 4.5 5.0 4.8 0.9 123 chrX 5349279 intron SK + chrX 5349340 intron SK + chrX 5349402 intron SK + chrX_5_5345001 chrX_5345001 RAL-513 2523 chrX 5441984 5442018 chrX 5442093 5442143 11 112 1.5 3.0 2.2 3.4 159 chrX 5441984 intergenic not near genes chrX 5442064 intergenic not near genes chrX 5442143 intergenic not near genes chrX_11_5440001 chrX_5440001 RAL-513 2524 chrX 5473568 5473619 chrX 5473663 5473692 12 87 2.5 2.0 2.2 3.8 124 chrX 5473568 intron SPR + chrX 5473630 intron SPR + chrX 5473692 intron SPR + chrX_12_5470001 chrX_5470001 RAL-513 2525 chrX 5798877 5798887 chrX 5799031 5799051 4 166 2.5 4.0 3.2 1.0 174 chrX 5798877 intergenic not near genes chrX 5798964 intergenic not near genes chrX 5799051 intergenic not near genes chrX_4_5795001 chrX_5795001 RAL-513 2526 chrX 5849665 5849674 chrX 5849763 5849773 4 97 5.5 3.0 4.2 0.8 108 chrX 5849665 intergenic not near genes chrX 5849719 intergenic not near genes chrX 5849773 intergenic not near genes chrX_4_5845001 chrX_5845001 RAL-513 2527 chrX 5849692 5849702 chrX 5849762 5849801 4 84 3.0 3.0 3.0 1.0 109 chrX 5849692 intergenic not near genes chrX 5849746 intergenic not near genes chrX 5849801 intergenic not near genes chrX_4_5845001 chrX_5845001 RAL-513 2528 chrX 5883801 5883839 chrX 5884059 5884100 pogo 7 255 3.0 5.0 4.0 1.4 299 chrX 5883801 intron CR45668 - chrX 5883950 intron CR45668 - chrX 5884100 intron CR45668 - chrX_7_5880001 chrX_5880001 RAL-513 2529 chrX 5884152 5884192 chrX 5884403 5884433 pogo 10 256 2.5 3.5 3.0 2.5 281 chrX 5884152 intron CR45668 - chrX 5884292 intron CR45668 - chrX 5884433 intron CR45668 - chrX_10_5880001 chrX_5880001 RAL-513 2530 chrX 6080814 6080823 chrX 6080915 6080923 6 101 9.5 2.5 6.0 0.9 109 chrX 6080814 intron CG4660 - chrX 6080868 intron CG4660 - chrX 6080923 intron CG4660 - chrX_6_6080001 chrX_6080001 RAL-513 2531 chrX 6118706 6118732 chrX 6118808 6118817 7 95 2.0 7.0 4.5 1.3 111 chrX 6118706 intron Ca-alpha1T - chrX 6118762 intron Ca-alpha1T - chrX 6118817 intron Ca-alpha1T - chrX_7_6115001 chrX_6115001 RAL-513 2532 chrX 6171605 6171614 chrX 6179016 6179066 Quasimodo 4 7438 3.5 5.0 4.2 0.8 7461 chrX 6171605 intron Ca-alpha1T - chrX 6175336 intron Ca-alpha1T - chrX 6179066 intron Ca-alpha1T - chrX_4_6175001 chrX_6175001 RAL-513 2533 chrX 6306536 6306581 chrX 6306631 6306663 9 90 3.5 3.0 3.2 2.1 127 chrX 6306536 3` UTR CG3823 + chrX 6306600 3` UTR CG3823 + chrX 6306663 3` UTR CG3823 + chrX_9_6305001 chrX_6305001 RAL-513 2534 chrX 6312190 6312221 chrX 6312277 6312313 7 93 2.5 4.5 3.5 1.6 123 chrX 6312190 intron CG15894 + chrX 6312252 intron CG15894 + chrX 6312313 intron CG15894 + chrX_7_6310001 chrX_6310001 RAL-513 2535 chrX 6314406 6314449 chrX 6314502 6314531 15 91 4.5 4.0 4.2 2.9 125 chrX 6314406 intron CG15894 + chrX 6314468 intron CG15894 + chrX 6314531 intron CG15894 + chrX_15_6310001 chrX_6310001 RAL-513 2536 chrX 6335219 6335241 chrX 6337732 6337752 Tirant 10 2518 1.0 5.0 3.0 2.5 2533 chrX 6335219 intergenic not near genes chrX 6336486 intergenic not near genes chrX 6337752 intergenic CG3842 + chrX_10_6335001 chrX_6335001 RAL-513 2537 chrX 6388649 6388690 chrX 6388745 6388784 9 95 1.5 3.0 2.2 2.8 135 chrX 6388649 intergenic not near genes chrX 6388716 intergenic not near genes chrX 6388784 intergenic not near genes chrX_9_6385001 chrX_6385001 RAL-513 2538 chrX 6392875 6392892 chrX 6397636 6397677 Doc 5 4777 4.5 4.0 4.2 1.0 4802 chrX 6392875 intergenic not near genes chrX 6395276 intergenic not near genes chrX 6397677 intergenic not near genes chrX_5_6395001 chrX_6395001 RAL-513 2539 chrX 6404774 6404818 chrX 6405560 6405585 11 776 1.0 3.0 2.0 3.7 811 chrX 6404774 intergenic not near genes chrX 6405180 intergenic not near genes chrX 6405585 intergenic not near genes chrX_11_6405001 chrX_6405001 RAL-513 2540 chrX 6487963 6487982 chrX 6488065 6488083 8 101 6.0 6.5 6.2 1.1 120 chrX 6487963 intron CG42340 - chrX 6488023 intron CG42340 - chrX 6488083 intron CG42340 - chrX_8_6485001 chrX_6485001 RAL-513 2541 chrX 6562813 6562848 chrX 6571303 6571320 Tirant 7 8490 3.0 4.5 3.8 1.5 8507 chrX 6562813 intron CG34417 + chrX 6567066 intron CG34417 + chrX 6571320 intron CG34417 + chrX_7_6565001 chrX_6565001 RAL-513 2542 chrX 6605462 6605507 chrX 6608504 6608549 Burdock 6 3041 1.5 5.0 3.2 1.4 3087 chrX 6605462 intron pigs + chrX 6607006 intron pigs + chrX 6608549 intron pigs + chrX_6_6605001 chrX_6605001 RAL-513 2543 chrX 6737515 6737549 chrX 6737603 6737651 10 91 2.5 3.5 3.0 2.5 136 chrX 6737515 intron CG3168 - chrX 6737583 intron CG3168 - chrX 6737651 intron CG3168 - chrX_10_6735001 chrX_6735001 RAL-513 2544 chrX 6792069 6792087 chrX 6792175 6792193 5 105 2.5 3.0 2.8 1.3 124 chrX 6792069 intron C3G - chrX 6792131 intron C3G - chrX 6792193 intron C3G - chrX_5_6790001 chrX_6790001 RAL-513 2545 chrX 6859543 6859564 chrX 6859976 6859977 4 428 4.0 1.5 2.8 1.1 434 chrX 6859543 intron CG14434 - chrX 6859760 intron CG14434 - chrX 6859977 intron CG14434 - chrX_4_6855001 chrX_6855001 RAL-513 2546 chrX 6883166 6883181 chrX 6883240 6883261 4 88 1.5 3.5 2.5 1.1 95 chrX 6883166 intergenic not near genes chrX 6883214 intergenic not near genes chrX 6883261 intergenic not near genes chrX_4_6880001 chrX_6880001 RAL-513 2547 chrX 6897578 6897709 chrX 6897676 6897813 13 116 1.5 2.0 1.8 4.6 235 chrX 6897578 intergenic not near genes chrX 6897696 intergenic not near genes chrX 6897813 intergenic not near genes chrX_13_6895001 chrX_6895001 RAL-513 2548 chrX 6984604 6984651 chrX 6984700 6984746 9 97 1.0 2.0 1.5 3.6 142 chrX 6984604 intron ogre - chrX 6984675 intron ogre - chrX 6984746 intron ogre - chrX_9_6980001 chrX_6980001 RAL-513 2549 chrX 6989499 6989530 chrX 6989592 6989633 7 100 2.0 4.0 3.0 1.8 134 chrX 6989499 intron ogre - chrX 6989566 intron ogre - chrX 6989633 intron ogre - chrX_7_6985001 chrX_6985001 RAL-513 2550 chrX 7023585 7023633 chrX 7030993 7031037 Tabor 17 7407 5.5 4.0 4.8 2.9 7452 chrX 7023585 intron CG12541 - chrX 7027311 intron CG12541 - chrX 7031037 intron CG12541 - chrX_17_7025001 chrX_7025001 RAL-513 2551 chrX 7125225 7125270 chrX 7134402 7134449 roo 7 9175 3.0 4.5 3.8 1.5 9224 chrX 7125225 intergenic not near genes chrX 7129837 intergenic not near genes chrX 7134449 intergenic not near genes chrX_7_7125001 chrX_7125001 RAL-513 2552 chrX 7543266 7543293 chrX 7543346 7543389 7 87 3.0 5.5 4.2 1.3 123 chrX 7543266 intron CG32719 - chrX 7543328 intron CG32719 - chrX 7543389 intron CG32719 - chrX_7_7540001 chrX_7540001 RAL-513 2553 chrX 7570642 7570664 chrX 7570768 7570818 8 147 1.5 3.0 2.2 2.5 176 chrX 7570642 intergenic not near genes chrX 7570730 intergenic not near genes chrX 7570818 intergenic not near genes chrX_8_7570001 chrX_7570001 RAL-513 2554 chrX 7702890 7702923 chrX 7703349 7703351 jockey 17 454 8.0 3.5 5.8 2.5 461 chrX 7702890 intron CHES-1-like - chrX 7703120 intron CHES-1-like - chrX 7703351 intron CHES-1-like - chrX_17_7700001 chrX_7700001 RAL-513 2555 chrX 7718960 7718975 chrX 7719115 7719144 5 164 0.0 3.5 1.8 1.8 184 chrX 7718960 intergenic not near genes chrX 7719052 intergenic not near genes chrX 7719144 intergenic not near genes chrX_5_7715001 chrX_7715001 RAL-513 2556 chrX 7845711 7845757 chrX 7847214 7847268 hopper2 8 1504 2.0 2.5 2.2 2.5 1557 chrX 7845711 intergenic not near genes chrX 7846490 intergenic not near genes chrX 7847268 intergenic not near genes chrX_8_7845001 chrX_7845001 RAL-513 2557 chrX 7881851 7881880 chrX 7881952 7881982 7 99 1.5 3.0 2.2 2.2 131 chrX 7881851 intergenic Ir7f -,Ir7e - chrX 7881916 intergenic Ir7f -,Ir7e - chrX 7881982 3` UTR Ir7f - chrX_7_7880001 chrX_7880001 RAL-513 2558 chrX 7883902 7883935 chrX 7884019 7884067 10 129 0.5 2.0 1.2 4.5 165 chrX 7883902 exon Ir7f - chrX 7883984 exon Ir7f - chrX 7884067 intergenic Ir7f - chrX_10_7880001 chrX_7880001 RAL-513 2559 chrX 7999461 7999464 chrX 7999535 7999564 4 93 2.5 6.0 4.2 0.8 103 chrX 7999461 exon Tbh + chrX 7999512 exon Tbh + chrX 7999564 exon Tbh + chrX_4_7995001 chrX_7995001 RAL-513 2560 chrX 8063718 8063767 chrX 8063833 8063883 8 115 3.0 0.5 1.8 2.9 165 chrX 8063718 intron mys + chrX 8063800 intron mys + chrX 8063883 5` UTR mys + chrX_8_8060001 chrX_8060001 RAL-513 2561 chrX 8066559 8066596 chrX 8066661 8066705 6 104 0.5 0.0 0.2 5.0 146 chrX 8066559 intron mys + chrX 8066632 intron mys + chrX 8066705 intron mys + chrX_6_8065001 chrX_8065001 RAL-513 2562 chrX 8364831 8364867 chrX 8365246 8365301 BS 8 417 2.5 0.0 1.2 3.6 470 chrX 8364831 intron nAChRalpha3 - chrX 8365066 intron nAChRalpha3 - chrX 8365301 intron nAChRalpha3 - chrX_8_8365001 chrX_8365001 RAL-513 2563 chrX 8421468 8421492 chrX 8421561 8421603 6 102 3.0 3.5 3.2 1.4 135 chrX 8421468 intron Trf2 + chrX 8421536 intron Trf2 + chrX 8421603 intron Trf2 + chrX_6_8420001 chrX_8420001 RAL-513 2564 chrX 8450995 8451011 chrX 8451093 8451104 4 97 4.5 5.0 4.8 0.7 109 chrX 8450995 intron org-1 - chrX 8451050 intron org-1 - chrX 8451104 exon org-1 - chrX_4_8450001 chrX_8450001 RAL-513 2565 chrX 8605296 8605324 chrX 8605393 8605421 8 96 7.5 5.5 6.5 1.1 125 chrX 8605296 exon Caf1-180 - chrX 8605358 exon Caf1-180 - chrX 8605421 exon Caf1-180 - chrX_8_8605001 chrX_8605001 RAL-513 2566 chrX 8605331 8605343 chrX 8605392 8605406 4 76 4.5 4.5 4.5 0.7 75 chrX 8605331 exon Caf1-180 - chrX 8605368 exon Caf1-180 - chrX 8605406 exon Caf1-180 - chrX_4_8605001 chrX_8605001 RAL-513 2567 chrX 8888619 8888662 chrX 8888715 8888759 11 92 1.5 2.5 2.0 3.7 140 chrX 8888619 intron Moe - chrX 8888689 intron Moe - chrX 8888759 intron Moe - chrX_11_8885001 chrX_8885001 RAL-513 2568 chrX 8922310 8922358 chrX 8922764 8922809 jockey 11 446 3.0 3.5 3.2 2.6 499 chrX 8922310 intron rdgA + chrX 8922560 intron rdgA + chrX 8922809 intron rdgA + chrX_11_8920001 chrX_8920001 RAL-513 2569 chrX 8948739 8948788 chrX 8956269 8956295 roo 11 7525 2.0 3.5 2.8 2.9 7556 chrX 8948739 intron rdgA + chrX 8952517 intron rdgA + chrX 8956295 intron rdgA + chrX_11_8950001 chrX_8950001 RAL-513 2570 chrX 9218065 9218082 chrX 9218176 9218190 4 110 5.0 1.5 3.2 1.0 125 chrX 9218065 3` UTR t - chrX 9218128 3` UTR t - chrX 9218190 3` UTR t - chrX_4_9215001 chrX_9215001 RAL-513 2571 chrX 9337921 9337967 chrX 9338033 9338077 9 106 2.0 2.5 2.2 2.8 156 chrX 9337921 intron CG34449 - chrX 9337999 intron CG34449 - chrX 9338077 exon CG34449 - chrX_9_9335001 chrX_9335001 RAL-513 2572 chrX 9470871 9470914 chrX 9470991 9471034 5 120 2.5 1.5 2.0 1.7 163 chrX 9470871 intron mgl - chrX 9470952 intron mgl - chrX 9471034 intron mgl - chrX_5_9470001 chrX_9470001 RAL-513 2573 chrX 9470917 9470923 chrX 9470988 9471044 4 96 2.5 1.0 1.8 1.4 127 chrX 9470917 intron mgl - chrX 9470980 intron mgl - chrX 9471044 intron mgl - chrX_4_9470001 chrX_9470001 RAL-513 2574 chrX 9508118 9508162 chrX 9509656 9509675 jockey 6 1531 3.5 4.5 4.0 1.2 1557 chrX 9508118 intron CG32700 - chrX 9508896 intron CG32700 - chrX 9509675 intron CG32700 - chrX_6_9505001 chrX_9505001 RAL-513 2575 chrX 9531635 9531673 chrX 9531735 9531772 6 98 5.0 1.0 3.0 1.5 137 chrX 9531635 intron CG32700 - chrX 9531704 intron CG32700 - chrX 9531772 intron CG32700 - chrX_6_9530001 chrX_9530001 RAL-513 2576 chrX 9575777 9575813 chrX 9576113 9576156 mdg3 8 332 6.0 3.0 4.5 1.5 379 chrX 9575777 intron,exon CG32699 -,CG42395 - chrX 9575966 intron,intron CG32699 -,CG42395 - chrX 9576156 intron,5` UTR CG32699 -,CG42395 - chrX_8_9575001 chrX_9575001 RAL-513 2577 chrX 9595348 9595385 chrX 9595442 9595481 5 97 5.5 3.0 4.2 1.0 133 chrX 9595348 5` UTR CR45543 + chrX 9595414 5` UTR CR45543 + chrX 9595481 intergenic CR45543 + chrX_5_9595001 chrX_9595001 RAL-513 2578 chrX 9633342 9633355 chrX 9633439 9633443 4 95 1.0 2.5 1.8 1.4 101 chrX 9633342 intron l(1)G0232 - chrX 9633392 intron l(1)G0232 - chrX 9633443 intron l(1)G0232 - chrX_4_9630001 chrX_9630001 RAL-513 2579 chrX 9791850 9791890 chrX 9791959 9792007 10 113 2.0 3.0 2.5 2.9 157 chrX 9791850 intron CG32698 + chrX 9791928 intron CG32698 + chrX 9792007 intron CG32698 + chrX_10_9790001 chrX_9790001 RAL-513 2580 chrX 9923404 9923421 chrX 9923481 9923521 8 98 1.0 1.0 1.0 4.0 117 chrX 9923404 intergenic not near genes chrX 9923462 intergenic not near genes chrX 9923521 intergenic not near genes chrX_8_9920001 chrX_9920001 RAL-513 2581 chrX 10035423 10035464 chrX 10035527 10035550 7 97 2.5 6.5 4.5 1.3 127 chrX 10035423 exon Cht6 + chrX 10035486 exon Cht6 + chrX 10035550 exon Cht6 + chrX_7_10035001 chrX_10035001 RAL-513 2582 chrX 10154265 10154310 chrX 10154360 10154401 4 94 1.0 0.5 0.8 2.2 136 chrX 10154265 intron,intron CR44894 -,CG12645 + chrX 10154333 intron,intron CR44894 -,CG12645 + chrX 10154401 intron,exon CR44894 -,CG12645 + chrX_4_10150001 chrX_10150001 RAL-513 2583 chrX 10248618 10248656 chrX 10248715 10248735 5 93 2.5 2.5 2.5 1.4 117 chrX 10248618 intron Hk - chrX 10248676 intron Hk - chrX 10248735 intron Hk - chrX_5_10245001 chrX_10245001 RAL-513 2584 chrX 10371416 10371460 chrX 10372338 10372352 10 918 6.5 13.0 9.8 0.9 936 chrX 10371416 intron CG17841 + chrX 10371884 intron,3` UTR CG17841 +,CG32686 - chrX 10372352 intron,exon CG17841 +,CG32686 - chrX_10_10370001 chrX_10370001 RAL-513 2585 chrX 10550330 10550354 chrX 10550414 10550452 6 96 4.5 2.0 3.2 1.4 122 chrX 10550330 intron spri - chrX 10550391 intron spri - chrX 10550452 intron spri - chrX_6_10550001 chrX_10550001 RAL-513 2586 chrX 10550855 10550869 chrX 10552327 10552337 hobo 5 1473 6.5 2.5 4.5 0.9 1482 chrX 10550855 intron spri - chrX 10551596 intron spri - chrX 10552337 intron spri - chrX_5_10550001 chrX_10550001 RAL-513 2587 chrX 10686031 10686054 chrX 10691188 10691211 roo 6 5156 4.0 1.5 2.8 1.6 5180 chrX 10686031 intron X11Lbeta + chrX 10688621 intron X11Lbeta + chrX 10691211 intron X11Lbeta + chrX_6_10685001 chrX_10685001 RAL-513 2588 chrX 10772672 10772681 chrX 10772763 10772784 Tirant 4 100 3.5 5.0 4.2 0.8 112 chrX 10772672 intron CG15211 + chrX 10772728 intron CG15211 + chrX 10772784 intron CG15211 + chrX_4_10770001 chrX_10770001 RAL-513 2589 chrX 11034289 11034322 chrX 11034624 11034672 7 345 4.0 3.5 3.8 1.5 383 chrX 11034289 intron CG42339 - chrX 11034480 intron CG42339 - chrX 11034672 intron CG42339 - chrX_7_11030001 chrX_11030001 RAL-513 2590 chrX 11062428 11062472 chrX 11062543 11062586 6 113 5.0 3.0 4.0 1.2 158 chrX 11062428 exon CG1537 - chrX 11062507 intron CG1537 - chrX 11062586 intron CG1537 - chrX_6_11060001 chrX_11060001 RAL-513 2591 chrX 11082168 11082217 chrX 11082541 11082568 12 364 2.0 3.0 2.5 3.4 400 chrX 11082168 intron sev - chrX 11082368 intron sev - chrX 11082568 intron sev - chrX_12_11080001 chrX_11080001 RAL-513 2592 chrX 11088555 11088597 chrX 11088666 11088708 5 111 1.5 0.0 0.8 2.8 153 chrX 11088555 intergenic not near genes chrX 11088632 intergenic not near genes chrX 11088708 intergenic not near genes chrX_5_11085001 chrX_11085001 RAL-513 2593 chrX 11096001 11096013 chrX 11103122 11103135 HMS-Beagle 4 7122 1.0 4.0 2.5 1.1 7134 chrX 11096001 intergenic not near genes chrX 11099568 intergenic not near genes chrX 11103135 intron CG42249 + chrX_4_11095001 chrX_11095001 RAL-513 2594 chrX 11184226 11184254 chrX 11189325 11189342 flea 6 5096 1.5 3.5 2.5 1.7 5116 chrX 11184226 intergenic not near genes chrX 11186784 intergenic not near genes chrX 11189342 intergenic not near genes chrX_6_11185001 chrX_11185001 RAL-513 2595 chrX 11194449 11194461 chrX 11201872 11201902 gypsy5 4 7432 1.0 2.5 1.8 1.4 7453 chrX 11194449 intergenic not near genes chrX 11198176 intergenic not near genes chrX 11201902 intergenic CG11106 + chrX_4_11195001 chrX_11195001 RAL-513 2596 chrX 11286133 11286187 chrX 11286460 11286498 11 320 0.0 1.5 0.8 6.1 365 chrX 11286133 intron CG44422 - chrX 11286316 intron CG44422 - chrX 11286498 intron CG44422 - chrX_11_11285001 chrX_11285001 RAL-513 2597 chrX 11312041 11312052 chrX 11319413 11319422 Stalker2 4 7370 4.0 2.0 3.0 1.0 7381 chrX 11312041 intergenic not near genes chrX 11315732 intergenic not near genes chrX 11319422 intergenic not near genes chrX_4_11315001 chrX_11315001 RAL-513 2598 chrX 11312073 11312086 chrX 11319410 11319435 Stalker2 4 7348 1.5 2.0 1.8 1.4 7362 chrX 11312073 intergenic not near genes chrX 11315754 intergenic not near genes chrX 11319435 intergenic not near genes chrX_4_11315001 chrX_11315001 RAL-513 2599 chrX 11558261 11558281 chrX 11558364 11558385 5 104 6.0 0.0 3.0 1.2 124 chrX 11558261 intron CG1572 - chrX 11558323 intron CG1572 - chrX 11558385 intron CG1572 - chrX_5_11555001 chrX_11555001 RAL-513 2600 chrX 11572546 11572589 chrX 11572675 11572718 5 129 19.5 20.0 19.8 0.2 172 chrX 11572546 intergenic Kmn1 -,CG11697 + chrX 11572632 intergenic CG11697 +,Kmn1 - chrX 11572718 5` UTR CG11697 + chrX_5_11570001 chrX_11570001 RAL-513 2601 chrX 11633407 11633446 chrX 11640471 11640520 297 17 7069 4.0 5.0 4.5 3.1 7113 chrX 11633407 intron Ptp10D + chrX 11636964 intron Ptp10D + chrX 11640520 intron Ptp10D + chrX_17_11635001 chrX_11635001 RAL-513 2602 chrX 11719869 11719889 chrX 11719956 11719988 6 95 4.5 3.0 3.8 1.2 119 chrX 11719869 3` UTR prtp + chrX 11719928 intergenic prtp +,Tango10 + chrX 11719988 intergenic prtp +,Tango10 + chrX_6_11715001 chrX_11715001 RAL-513 2603 chrX 11922346 11922381 chrX 11922502 11922535 10 151 4.0 4.0 4.0 2.0 189 chrX 11922346 exon Sclp - chrX 11922440 intron Sclp - chrX 11922535 intron Sclp - chrX_10_11920001 chrX_11920001 RAL-513 2604 chrX 12043818 12043865 chrX 12043926 12043933 8 98 1.5 3.5 2.5 2.3 115 chrX 12043818 5` UTR,5` UTR CR43960 +,Ten-a + chrX 12043876 5` UTR,5` UTR CR43960 +,Ten-a + chrX 12043933 5` UTR,5` UTR CR43960 +,Ten-a + chrX_8_12040001 chrX_12040001 RAL-513 2605 chrX 12157399 12157416 chrX 12157487 12157512 4 94 3.0 0.0 1.5 1.6 113 chrX 12157399 intron Ten-a + chrX 12157456 intron Ten-a + chrX 12157512 intron Ten-a + chrX_4_12155001 chrX_12155001 RAL-513 2606 chrX 12168124 12168154 chrX 12173586 12173615 I-element 4 5461 1.5 2.0 1.8 1.4 5491 chrX 12168124 intron Ten-a + chrX 12170870 intron Ten-a + chrX 12173615 intron Ten-a + chrX_4_12170001 chrX_12170001 RAL-513 2607 chrX 12176735 12176762 chrX 12176819 12176857 9 87 0.5 4.0 2.2 2.8 122 chrX 12176735 intron,3` UTR Ten-a +,CG1924 - chrX 12176796 intron,3` UTR Ten-a +,CG1924 - chrX 12176857 intron,3` UTR Ten-a +,CG1924 - chrX_9_12175001 chrX_12175001 RAL-513 2608 chrX 12375474 12375513 chrX 12375591 12375631 8 115 3.0 1.5 2.2 2.5 157 chrX 12375474 intergenic Ir11a - chrX 12375552 intergenic Ir11a - chrX 12375631 exon Ir11a - chrX_8_12375001 chrX_12375001 RAL-513 2609 chrX 12694893 12694938 chrX 12694991 12695036 6 96 2.5 4.5 3.5 1.3 143 chrX 12694893 intron Smr - chrX 12694964 intron Smr - chrX 12695036 intron Smr - chrX_6_12690001 chrX_12690001 RAL-513 2610 chrX 12919698 12919745 chrX 12919807 12919855 10 107 3.0 5.0 4.0 2.0 157 chrX 12919698 5` UTR fne + chrX 12919776 intron fne + chrX 12919855 intron fne + chrX_10_12915001 chrX_12915001 RAL-513 2611 chrX 12930599 12930605 chrX 12937734 12937740 HMS-Beagle 4 7134 3.5 3.0 3.2 1.0 7141 chrX 12930599 intron fne + chrX 12934170 intron fne + chrX 12937740 intron fne + chrX_4_12930001 chrX_12930001 RAL-513 2612 chrX 13018499 13018531 chrX 13018603 13018635 4 104 1.0 1.5 1.2 1.8 136 chrX 13018499 intron rad + chrX 13018567 intron rad + chrX 13018635 intron rad + chrX_4_13015001 chrX_13015001 RAL-513 2613 chrX 13172352 13172380 chrX 13172425 13172476 12 89 4.5 6.0 5.2 1.9 124 chrX 13172352 exon CG34411 - chrX 13172414 intron CG34411 - chrX 13172476 intron CG34411 - chrX_12_13170001 chrX_13170001 RAL-513 2614 chrX 13269193 13269215 chrX 13269289 13269311 4 95 0.0 0.5 0.2 3.3 118 chrX 13269193 intron HDAC4 - chrX 13269252 intron HDAC4 - chrX 13269311 intron HDAC4 - chrX_4_13265001 chrX_13265001 RAL-513 2615 chrX 13429445 13429484 chrX 13430614 13430647 jockey 6 1158 8.5 8.5 8.5 0.6 1202 chrX 13429445 intergenic not near genes chrX 13430046 intergenic not near genes chrX 13430647 intergenic not near genes chrX_6_13430001 chrX_13430001 RAL-513 2616 chrX 13463626 13463675 chrX 13469223 13469237 mdg3 9 5588 3.0 2.5 2.8 2.4 5611 chrX 13463626 intron Neto + chrX 13466432 intron Neto + chrX 13469237 intron Neto + chrX_9_13465001 chrX_13465001 RAL-513 2617 chrX 13934279 13934315 chrX 13934382 13934384 7 98 2.5 4.0 3.2 1.7 105 chrX 13934279 intron mamo - chrX 13934332 intron mamo - chrX 13934384 intron mamo - chrX_7_13930001 chrX_13930001 RAL-513 2618 chrX 13935501 13935518 chrX 13935598 13935599 4 96 5.5 7.0 6.2 0.6 98 chrX 13935501 intron mamo - chrX 13935550 intron mamo - chrX 13935599 intron mamo - chrX_4_13935001 chrX_13935001 RAL-513 2619 chrX 13937960 13938006 chrX 13941251 13941297 I-element 5 3291 2.0 1.0 1.5 2.0 3337 chrX 13937960 intron mamo - chrX 13939628 intron mamo - chrX 13941297 intron mamo - chrX_5_13935001 chrX_13935001 RAL-513 2620 chrX 13057298 13057304 chrX 13966949 13966949 4 909647 8.5 8.5 8.5 0.4 909651 chrX 13057298 intron rad + chrX 13512124 intron Neto + chrX 13966949 intron mamo - chrX_4_13510001 chrX_13510001 RAL-513 2621 chrX 14105015 14105048 chrX 14114186 14114202 roo 5 9167 4.0 5.5 4.8 0.9 9187 chrX 14105015 intergenic not near genes chrX 14109608 intergenic not near genes chrX 14114202 5` UTR CR44657 + chrX_5_14105001 chrX_14105001 RAL-513 2622 chrX 14328455 14328494 chrX 14328594 14328607 13 136 2.5 4.0 3.2 3.1 152 chrX 14328455 intron dpr8 + chrX 14328531 intron dpr8 + chrX 14328607 intron dpr8 + chrX_13_14325001 chrX_14325001 RAL-513 2623 chrX 14395096 14395128 chrX 14395215 14395247 4 116 1.5 3.0 2.2 1.2 151 chrX 14395096 intron dpr8 + chrX 14395172 intron dpr8 + chrX 14395247 intron dpr8 + chrX_4_14395001 chrX_14395001 RAL-513 2624 chrX 14404999 14405028 chrX 14405097 14405110 6 95 1.0 1.5 1.2 2.7 111 chrX 14404999 intron dpr8 + chrX 14405054 intron dpr8 + chrX 14405110 intron dpr8 + chrX_6_14405001 chrX_14405001 RAL-513 2625 chrX 14411251 14411291 chrX 14411340 14411384 8 93 1.5 2.5 2.0 2.7 133 chrX 14411251 intron dpr8 + chrX 14411318 intron dpr8 + chrX 14411384 intron dpr8 + chrX_8_14410001 chrX_14410001 RAL-513 2626 chrX 14416298 14416333 chrX 14421085 14421116 F-element 7 4781 1.5 5.5 3.5 1.6 4818 chrX 14416298 intron dpr8 + chrX 14418707 intron dpr8 + chrX 14421116 intron dpr8 + chrX_7_14415001 chrX_14415001 RAL-513 2627 chrX 14455563 14455612 chrX 14457146 14457185 6 1575 14.0 20.0 17.0 0.3 1622 chrX 14455563 intron dpr8 + chrX 14456374 intron dpr8 + chrX 14457185 intron dpr8 + chrX_6_14455001 chrX_14455001 RAL-513 2628 chrX 14570054 14570104 chrX 14570155 14570187 7 91 1.5 0.5 1.0 3.5 133 chrX 14570054 intergenic not near genes chrX 14570120 intergenic not near genes chrX 14570187 intergenic not near genes chrX_7_14570001 chrX_14570001 RAL-513 2629 chrX 14597726 14597740 chrX 14597814 14597827 5 91 0.0 1.5 0.8 2.8 101 chrX 14597726 intron CG9413 - chrX 14597776 intron CG9413 - chrX 14597827 intron CG9413 - chrX_5_14595001 chrX_14595001 RAL-513 2630 chrX 14621225 14621269 chrX 14621321 14621361 8 92 4.0 2.5 3.2 1.9 136 chrX 14621225 intron NetA - chrX 14621293 intron NetA - chrX 14621361 intron NetA - chrX_8_14620001 chrX_14620001 RAL-513 2631 chrX 14628170 14628214 chrX 14628274 14628324 6 109 4.0 1.5 2.8 1.6 154 chrX 14628170 intron NetA - chrX 14628247 intron NetA - chrX 14628324 intron NetA - chrX_6_14625001 chrX_14625001 RAL-513 2632 chrX 14714025 14714064 chrX 14714127 14714163 6 96 3.0 5.0 4.0 1.2 138 chrX 14714025 intron NetB - chrX 14714094 intron NetB - chrX 14714163 intron NetB - chrX_6_14710001 chrX_14710001 RAL-513 2633 chrX 14778034 14778054 chrX 14782825 14782871 Doc 6 4812 4.0 3.0 3.5 1.3 4837 chrX 14778034 intergenic CG5347 + chrX 14780452 intergenic not near genes chrX 14782871 intergenic Ag5r2 - chrX_6_14780001 chrX_14780001 RAL-513 2634 chrX 14881714 14881754 chrX 14881823 14881861 9 104 0.5 0.0 0.2 7.5 147 chrX 14881714 intron,intron,intron Flo2 +,CG45064 -,CG45065 - chrX 14881788 intron,intron,intron Flo2 +,CG45064 -,CG45065 - chrX 14881861 intron,intron,intron Flo2 +,CG45064 -,CG45065 - chrX_9_14880001 chrX_14880001 RAL-513 2635 chrX 14883577 14883619 chrX 14883673 14883715 4 96 2.5 0.5 1.5 1.6 138 chrX 14883577 intron Flo2 + chrX 14883646 intron Flo2 + chrX 14883715 intron Flo2 + chrX_4_14880001 chrX_14880001 RAL-513 2636 chrX 14936825 14936888 chrX 14946115 14946165 roo 9 9283 1.0 1.5 1.2 4.1 9340 chrX 14936825 intron pdgy - chrX 14941495 intron pdgy - chrX 14946165 intron pdgy - chrX_9_14940001 chrX_14940001 RAL-513 2637 chrX 14968057 14968099 chrX 14968156 14968198 7 92 0.5 4.0 2.2 2.2 141 chrX 14968057 intron eag + chrX 14968128 intron eag + chrX 14968198 intron eag + chrX_7_14965001 chrX_14965001 RAL-513 2638 chrX 15204466 15204489 chrX 15205048 15205073 5 579 5.0 4.5 4.8 0.9 607 chrX 15204466 intergenic not near genes chrX 15204770 intergenic not near genes chrX 15205073 intergenic not near genes chrX_5_15200001 chrX_15200001 RAL-513 2639 chrX 15273715 15273727 chrX 15274897 15274908 1360 4 1182 5.0 4.5 4.8 0.7 1193 chrX 15273715 intergenic not near genes chrX 15274312 intergenic not near genes chrX 15274908 intergenic not near genes chrX_4_15270001 chrX_15270001 RAL-513 2640 chrX 15277615 15277667 chrX 15277720 15277771 10 100 1.5 1.0 1.2 4.5 156 chrX 15277615 intergenic not near genes chrX 15277693 intergenic not near genes chrX 15277771 intergenic not near genes chrX_10_15275001 chrX_15275001 RAL-513 2641 chrX 15413040 15413075 chrX 15417358 15417397 Juan 9 4312 3.5 5.0 4.2 1.7 4357 chrX 15413040 intron Cngl - chrX 15415218 intron Cngl - chrX 15417397 intron Cngl - chrX_9_15415001 chrX_15415001 RAL-513 2642 chrX 15435691 15435695 chrX 15436131 15436142 rover 5 445 0.5 7.5 4.0 1.0 451 chrX 15435691 intron Cngl - chrX 15435916 intron Cngl - chrX 15436142 intron Cngl - chrX_5_15435001 chrX_15435001 RAL-513 2643 chrX 15648198 15648226 chrX 15648737 15648765 8 538 4.0 2.5 3.2 1.9 567 chrX 15648198 intergenic not near genes chrX 15648482 intergenic not near genes chrX 15648765 intergenic not near genes chrX_8_15645001 chrX_15645001 RAL-513 2644 chrX 15678025 15678066 chrX 15678122 15678163 4 91 4.5 6.5 5.5 0.6 138 chrX 15678025 intergenic CG12708 + chrX 15678094 intergenic CG12708 + chrX 15678163 intergenic CG12708 + chrX_4_15675001 chrX_15675001 RAL-513 2645 chrX 15686665 15686694 chrX 15687158 15687187 4 492 5.0 4.5 4.8 0.7 522 chrX 15686665 exon CG15599 - chrX 15686926 exon CG15599 - chrX 15687187 exon CG15599 - chrX_4_15685001 chrX_15685001 RAL-513 2646 chrX 16100540 16100591 chrX 16100639 16100684 5 96 1.0 1.0 1.0 2.5 144 chrX 16100540 intron,intron CG42353 -,CG42354 - chrX 16100612 intron,intron CG42353 -,CG42354 - chrX 16100684 intron,intron CG42353 -,CG42354 - chrX_5_16100001 chrX_16100001 RAL-513 2647 chrX 16218572 16218586 chrX 16218905 16218922 6 336 7.0 3.0 5.0 1.0 350 chrX 16218572 intergenic not near genes chrX 16218747 intergenic not near genes chrX 16218922 intergenic not near genes chrX_6_16215001 chrX_16215001 RAL-513 2648 chrX 16218588 16218617 chrX 16218902 16218951 7 331 4.5 2.0 3.2 1.7 363 chrX 16218588 intergenic not near genes chrX 16218770 intergenic not near genes chrX 16218951 intergenic not near genes chrX_7_16215001 chrX_16215001 RAL-513 2649 chrX 16329440 16329449 chrX 16329514 16329519 4 86 0.0 5.0 2.5 1.1 79 chrX 16329440 intron CG9919 - chrX 16329480 intron CG9919 - chrX 16329519 exon CG9919 - chrX_4_16325001 chrX_16325001 RAL-513 2650 chrX 16340647 16340695 chrX 16349824 16349868 roo 6 9176 4.0 2.0 3.0 1.5 9221 chrX 16340647 intergenic Dsp1 + chrX 16345258 intergenic not near genes chrX 16349868 intergenic sl + chrX_6_16345001 chrX_16345001 RAL-513 2651 chrX 16492625 16492669 chrX 16498222 16498264 mdg3 12 5595 3.0 1.5 2.2 3.8 5639 chrX 16492625 intron para - chrX 16495444 intron para - chrX 16498264 intron para - chrX_12_16495001 chrX_16495001 RAL-513 2652 chrX 16623466 16623483 chrX 16623572 16623572 4 101 7.0 0.0 3.5 0.9 106 chrX 16623466 intergenic not near genes chrX 16623519 intergenic Rok - chrX 16623572 intergenic Rok - chrX_4_16620001 chrX_16620001 RAL-513 2653 chrX 16700508 16700556 chrX 16700611 16700657 10 95 0.0 2.0 1.0 5.0 149 chrX 16700508 intron,3` UTR CG4678 +,spheroide - chrX 16700582 intron,3` UTR CG4678 +,spheroide - chrX 16700657 intron,3` UTR CG4678 +,spheroide - chrX_10_16700001 chrX_16700001 RAL-513 2654 chrX 16764726 16764735 chrX 16764823 16764828 4 96 3.5 0.0 1.8 1.4 102 chrX 16764726 intron if - chrX 16764777 intron if - chrX 16764828 intron if - chrX_4_16760001 chrX_16760001 RAL-513 2655 chrX 16858652 16858683 chrX 16859198 16859249 7 555 3.0 3.5 3.2 1.7 597 chrX 16858652 intron CG13003 - chrX 16858950 intron CG13003 - chrX 16859249 intron CG13003 - chrX_7_16855001 chrX_16855001 RAL-513 2656 chrX 16870066 16870089 chrX 16870168 16870192 4 102 0.5 3.0 1.8 1.4 126 chrX 16870066 intron CG13003 - chrX 16870129 intron CG13003 - chrX 16870192 intron CG13003 - chrX_4_16870001 chrX_16870001 RAL-513 2657 chrX 16898084 16898118 chrX 16898183 16898199 5 91 6.5 1.0 3.8 1.0 115 chrX 16898084 intergenic not near genes chrX 16898142 intergenic not near genes chrX 16898199 intergenic not near genes chrX_5_16895001 chrX_16895001 RAL-513 2658 chrX 16906661 16906679 chrX 16906738 16906786 5 99 1.5 2.0 1.8 1.8 125 chrX 16906661 intron CR44754 - chrX 16906724 intron CR44754 - chrX 16906786 intron CR44754 - chrX_5_16905001 chrX_16905001 RAL-513 2659 chrX 16936002 16936033 chrX 16936420 16936466 jockey 6 426 0.0 1.5 0.8 3.3 464 chrX 16936002 intron CG4928 + chrX 16936234 intron CG4928 + chrX 16936466 intron CG4928 + chrX_6_16935001 chrX_16935001 RAL-513 2660 chrX 1053117 1053123 chrX 16983076 16983076 5 15929956 11.0 15.5 13.2 0.4 15929959 chrX 1053117 intron CR44779 + chrX 9018096 intron,intron rdgA +,CR43836 - chrX 16983076 intron CG45002 - chrX_5_9015001 chrX_9015001 RAL-513 2661 chrX 17063180 17063208 chrX 17063270 17063311 5 101 1.5 2.5 2.0 1.7 131 chrX 17063180 intron CG45002 - chrX 17063246 intron CG45002 - chrX 17063311 intron CG45002 - chrX_5_17060001 chrX_17060001 RAL-513 2662 chrX 17113550 17113564 chrX 17113649 17113656 4 98 0.0 5.0 2.5 1.1 106 chrX 17113550 intron CG5004 + chrX 17113603 intron CG5004 + chrX 17113656 intron CG5004 + chrX_4_17110001 chrX_17110001 RAL-513 2663 chrX 17122637 17122657 chrX 17122729 17122746 4 100 1.0 3.0 2.0 1.3 109 chrX 17122637 intron CG5004 + chrX 17122692 intron CG5004 + chrX 17122746 intron CG5004 + chrX_4_17120001 chrX_17120001 RAL-513 2664 chrX 17195195 17195232 chrX 17200293 17200316 flea 15 5103 3.5 4.5 4.0 3.0 5121 chrX 17195195 3` UTR baz + chrX 17197756 3` UTR baz + chrX 17200316 3` UTR baz + chrX_15_17195001 chrX_17195001 RAL-513 2665 chrX 17205839 17205852 chrX 17205939 17205962 4 108 3.5 6.0 4.8 0.7 123 chrX 17205839 intergenic not near genes chrX 17205900 intergenic not near genes chrX 17205962 intergenic CG32564 + chrX_4_17205001 chrX_17205001 RAL-513 2666 chrX 17316168 17316387 chrX 17316280 17316491 5 104 2.0 2.5 2.2 1.6 323 chrX 17316168 intron B-H2 + chrX 17316330 intron B-H2 + chrX 17316491 intron B-H2 + chrX_5_17315001 chrX_17315001 RAL-513 2667 chrX 17352592 17352616 chrX 17352710 17352739 11 119 0.0 4.5 2.2 3.4 147 chrX 17352592 intergenic not near genes chrX 17352666 intergenic not near genes chrX 17352739 intergenic not near genes chrX_11_17350001 chrX_17350001 RAL-513 2668 chrX 17502339 17502356 chrX 17502439 17502456 5 100 3.0 3.0 3.0 1.2 117 chrX 17502339 intron CG43658 - chrX 17502398 intron CG43658 - chrX 17502456 intron CG43658 - chrX_5_17500001 chrX_17500001 RAL-513 2669 chrX 17680875 17680899 chrX 17680968 17680993 6 92 7.0 3.0 5.0 1.0 118 chrX 17680875 intron chas - chrX 17680934 intron chas - chrX 17680993 intron chas - chrX_6_17680001 chrX_17680001 RAL-513 2670 chrX 17680905 17680921 chrX 17680966 17680988 5 68 3.0 2.5 2.8 1.3 83 chrX 17680905 intron chas - chrX 17680946 intron chas - chrX 17680988 intron chas - chrX_5_17680001 chrX_17680001 RAL-513 2671 chrX 17716569 17716588 chrX 17716674 17716692 4 106 4.0 6.0 5.0 0.7 123 chrX 17716569 intron CG42684 + chrX 17716630 intron CG42684 + chrX 17716692 intron CG42684 + chrX_4_17715001 chrX_17715001 RAL-513 2672 chrX 17792940 17792980 chrX 17796249 17796297 flea 6 3316 1.5 2.0 1.8 2.1 3357 chrX 17792940 intron OdsH + chrX 17794618 intron OdsH + chrX 17796297 intron OdsH + chrX_6_17790001 chrX_17790001 RAL-513 2673 chrX 17849757 17849794 chrX 17850459 17850511 9 710 20.0 26.0 23.0 0.4 754 chrX 17849757 intron CG15814 - chrX 17850134 5` UTR CG15814 - chrX 17850511 5` UTR CG6506 + chrX_9_17850001 chrX_17850001 RAL-513 2674 chrX 17914539 17914592 chrX 17914655 17914700 12 113 4.5 4.5 4.5 2.2 161 chrX 17914539 intron CG6847 + chrX 17914620 intron CG6847 + chrX 17914700 intron CG6847 + chrX_12_17910001 chrX_17910001 RAL-513 2675 chrX 18194050 18194095 chrX 18194600 18194619 BS 14 545 4.0 6.0 5.0 2.3 569 chrX 18194050 intron Frq2 + chrX 18194334 intron Frq2 + chrX 18194619 intron Frq2 + chrX_14_18190001 chrX_18190001 RAL-513 2676 chrX 18218042 18218063 chrX 18218177 18218200 5 136 2.5 8.0 5.2 0.8 158 chrX 18218042 intron CG33639 - chrX 18218121 intron CG33639 - chrX 18218200 intron CG33639 - chrX_5_18215001 chrX_18215001 RAL-513 2677 chrX 18362933 18362944 chrX 18363030 18363041 4 97 0.0 3.0 1.5 1.6 108 chrX 18362933 intergenic CG6106 + chrX 18362987 intergenic CG6106 + chrX 18363041 intergenic not near genes chrX_4_18360001 chrX_18360001 RAL-513 2678 chrX 18429481 18429498 chrX 18434812 18434828 Transpac 4 5331 2.5 3.0 2.8 1.1 5347 chrX 18429481 intergenic not near genes chrX 18432154 intergenic not near genes chrX 18434828 intergenic not near genes chrX_4_18430001 chrX_18430001 RAL-513 2679 chrX 18558760 18558808 chrX 18558858 18558910 10 95 2.0 2.5 2.2 3.1 150 chrX 18558760 intron Bx + chrX 18558835 intron Bx + chrX 18558910 intron Bx + chrX_10_18555001 chrX_18555001 RAL-513 2680 chrX 18645010 18645043 chrX 18645110 18645161 9 114 4.0 5.5 4.8 1.6 151 chrX 18645010 intron Rip11 - chrX 18645086 intron Rip11 - chrX 18645161 intron Rip11 - chrX_9_18645001 chrX_18645001 RAL-513 2681 chrX 18698835 18698877 chrX 18698968 18699013 7 129 1.5 3.0 2.2 2.2 178 chrX 18698835 intergenic not near genes chrX 18698924 intergenic not near genes chrX 18699013 intergenic not near genes chrX_7_18695001 chrX_18695001 RAL-513 2682 chrX 18896509 18896545 chrX 18896640 18896676 7 130 1.0 1.0 1.0 3.5 167 chrX 18896509 3` UTR CG7349 + chrX 18896592 intergenic CG7349 + chrX 18896676 intergenic CG7349 + chrX_7_18895001 chrX_18895001 RAL-513 2683 chrX 18957050 18957090 chrX 18965733 18965749 roo 6 8674 2.5 0.5 1.5 2.4 8699 chrX 18957050 intron CG43759 + chrX 18961400 intron CG43759 + chrX 18965749 intron CG43759 + chrX_6_18960001 chrX_18960001 RAL-513 2684 chrX 19014354 19014391 chrX 19014438 19014475 8 83 5.0 2.0 3.5 1.8 121 chrX 19014354 intron CG43759 + chrX 19014414 intron CG43759 + chrX 19014475 intron CG43759 + chrX_8_19010001 chrX_19010001 RAL-513 2685 chrX 19037974 19037999 chrX 19038103 19038139 5 133 4.0 1.5 2.8 1.3 165 chrX 19037974 intergenic not near genes chrX 19038056 intergenic not near genes chrX 19038139 intergenic not near genes chrX_5_19035001 chrX_19035001 RAL-513 2686 chrX 19060399 19060425 chrX 19065203 19065224 Doc 10 4799 4.0 3.0 3.5 2.2 4825 chrX 19060399 intron CG14190 + chrX 19062812 intron CG14190 + chrX 19065224 intron CG14190 + chrX_10_19060001 chrX_19060001 RAL-513 2687 chrX 19080308 19080358 chrX 19080433 19080449 9 122 2.5 4.5 3.5 2.0 141 chrX 19080308 intergenic not near genes chrX 19080378 intergenic not near genes chrX 19080449 intergenic not near genes chrX_9_19080001 chrX_19080001 RAL-513 2688 chrX 19099636 19099686 chrX 19099739 19099788 8 99 3.5 4.0 3.8 1.7 152 chrX 19099636 intergenic not near genes chrX 19099712 intergenic not near genes chrX 19099788 intergenic not near genes chrX_8_19095001 chrX_19095001 RAL-513 2689 chrX 19124435 19124460 chrX 19124523 19124566 4 102 3.0 2.0 2.5 1.1 131 chrX 19124435 intergenic CG15882 - chrX 19124500 intergenic CG15882 - chrX 19124566 intergenic CG15882 -,tgy - chrX_4_19120001 chrX_19120001 RAL-513 2690 chrX 19125673 19125721 chrX 19125821 19125839 15 145 2.5 2.5 2.5 4.3 166 chrX 19125673 intron tgy - chrX 19125756 intron tgy - chrX 19125839 intron tgy - chrX_15_19125001 chrX_19125001 RAL-513 2691 chrX 19131969 19132001 chrX 19132050 19132101 11 93 1.0 2.5 1.8 3.9 132 chrX 19131969 intergenic not near genes chrX 19132035 intergenic not near genes chrX 19132101 intergenic not near genes chrX_11_19130001 chrX_19130001 RAL-513 2692 chrX 19136537 19136550 chrX 19143476 19143476 412 4 6934 3.5 0.5 2.0 1.3 6939 chrX 19136537 intergenic not near genes chrX 19140006 intergenic not near genes chrX 19143476 3` UTR RhoGAP18B - chrX_4_19140001 chrX_19140001 RAL-513 2693 chrX 19136551 19136585 chrX 19143472 19143524 412 4 6924 0.0 0.5 0.2 3.3 6973 chrX 19136551 intergenic not near genes chrX 19140038 intergenic not near genes chrX 19143524 3` UTR RhoGAP18B - chrX_4_19140001 chrX_19140001 RAL-513 2694 chrX 19170590 19170602 chrX 19170678 19170683 4 90 4.0 4.5 4.2 0.8 93 chrX 19170590 5` UTR Inx5 - chrX 19170636 5` UTR Inx5 - chrX 19170683 5` UTR Inx5 - chrX_4_19170001 chrX_19170001 RAL-513 2695 chrX 19176200 19176240 chrX 19176304 19176328 6 93 1.5 4.5 3.0 1.5 128 chrX 19176200 3` UTR CG7556 - chrX 19176264 3` UTR CG7556 - chrX 19176328 3` UTR CG7556 - chrX_6_19175001 chrX_19175001 RAL-513 2696 chrX 19182006 19182040 chrX 19182138 19182167 6 129 0.0 1.5 0.8 3.3 161 chrX 19182006 3` UTR CG7453 + chrX 19182086 intergenic CG7453 + chrX 19182167 intergenic CG7453 + chrX_6_19180001 chrX_19180001 RAL-513 2697 chrX 19225296 19225318 chrX 19225361 19225411 5 70 2.5 2.0 2.2 1.6 115 chrX 19225296 intron CG7884 + chrX 19225354 intron CG7884 + chrX 19225411 intron CG7884 + chrX_5_19225001 chrX_19225001 RAL-513 2698 chrX 19280994 19281020 chrX 19281135 19281169 4 146 0.5 1.5 1.0 2.0 175 chrX 19280994 intergenic CG8034 - chrX 19281082 intergenic CG8034 - chrX 19281169 intergenic CG8034 - chrX_4_19280001 chrX_19280001 RAL-513 2699 chrX 19320207 19320251 chrX 19320314 19320359 14 100 2.5 5.0 3.8 2.9 152 chrX 19320207 intron out - chrX 19320283 intron out - chrX 19320359 intron out - chrX_14_19320001 chrX_19320001 RAL-513 2700 chrX 19380147 19380183 chrX 19380396 19380437 pogo 7 252 3.0 2.5 2.8 1.8 290 chrX 19380147 intron kek5 + chrX 19380292 intron kek5 + chrX 19380437 intron kek5 + chrX_7_19380001 chrX_19380001 RAL-513 2701 chrX 16983076 16983077 chrX 19404963 19404965 5 2421887 15.5 10.5 13.0 0.4 2421889 chrX 16983076 intron CG45002 - chrX 18194020 intron Frq2 + chrX 19404965 intron kek5 + chrX_5_18190001 chrX_18190001 RAL-513 2702 chrX 19472106 19472156 chrX 19472696 19472726 jockey 10 574 4.0 2.5 3.2 2.4 620 chrX 19472106 intergenic kek5 + chrX 19472416 intergenic not near genes chrX 19472726 intergenic not near genes chrX_10_19470001 chrX_19470001 RAL-513 2703 chrX 19530057 19530073 chrX 19530156 19530172 5 100 10.0 3.5 6.8 0.6 115 chrX 19530057 3` UTR CoRest + chrX 19530114 3` UTR CoRest + chrX 19530172 3` UTR CoRest + chrX_5_19530001 chrX_19530001 RAL-513 2704 chrX 19530081 19530107 chrX 19530155 19530204 8 90 3.0 3.5 3.2 1.9 123 chrX 19530081 3` UTR CoRest + chrX 19530142 3` UTR CoRest + chrX 19530204 3` UTR CoRest + chrX_8_19530001 chrX_19530001 RAL-513 2705 chrX 19710052 19710095 chrX 19711857 19711866 S-element 12 1799 4.0 2.0 3.0 3.0 1814 chrX 19710052 intron meso18E - chrX 19710959 intron meso18E - chrX 19711866 intron meso18E - chrX_12_19710001 chrX_19710001 RAL-513 2706 chrX 19791256 19791278 chrX 19791370 19791392 6 114 3.0 2.5 2.8 1.6 136 chrX 19791256 intergenic not near genes chrX 19791324 intergenic not near genes chrX 19791392 intergenic not near genes chrX_6_19790001 chrX_19790001 RAL-513 2707 chrX 19849810 19849843 chrX 19850140 19850180 7 336 1.5 3.5 2.5 2.0 370 chrX 19849810 intron pico - chrX 19849995 intron pico - chrX 19850180 intron pico - chrX_7_19845001 chrX_19845001 RAL-513 2708 chrX 19881438 19881478 chrX 19881538 19881540 8 92 3.0 1.0 2.0 2.7 102 chrX 19881438 intron Hers + chrX 19881489 intron Hers + chrX 19881540 intron Hers + chrX_8_19880001 chrX_19880001 RAL-513 2709 chrX 19983870 19983898 chrX 19983949 19983963 7 87 0.0 2.5 1.2 3.2 93 chrX 19983870 intergenic not near genes chrX 19983916 intergenic not near genes chrX 19983963 intergenic not near genes chrX_7_19980001 chrX_19980001 RAL-513 2710 chrX 19992399 19992428 chrX 19992495 19992523 6 89 4.0 5.0 4.5 1.1 124 chrX 19992399 intergenic not near genes chrX 19992461 intergenic not near genes chrX 19992523 intergenic not near genes chrX_6_19990001 chrX_19990001 RAL-513 2711 chrX 20041513 20041552 chrX 20041613 20041650 10 94 3.0 2.5 2.8 2.6 137 chrX 20041513 intron Dop2R - chrX 20041582 intron Dop2R - chrX 20041650 intron Dop2R - chrX_10_20040001 chrX_20040001 RAL-513 2712 chrX 20082758 20082774 chrX 20082833 20082838 5 84 3.0 2.5 2.8 1.3 80 chrX 20082758 intergenic not near genes chrX 20082798 intergenic not near genes chrX 20082838 intergenic not near genes chrX_5_20080001 chrX_20080001 RAL-513 2713 chrX 20132285 20132291 chrX 20132388 20132394 4 102 7.0 4.5 5.8 0.6 109 chrX 20132285 intergenic not near genes chrX 20132340 intergenic not near genes chrX 20132394 intergenic not near genes chrX_4_20130001 chrX_20130001 RAL-513 2714 chrX 20144292 20144313 chrX 20144392 20144410 7 96 3.0 4.5 3.8 1.5 118 chrX 20144292 intergenic not near genes chrX 20144351 intergenic not near genes chrX 20144410 intergenic not near genes chrX_7_20140001 chrX_20140001 RAL-513 2715 chrX 20269933 20269943 chrX 20270022 20270031 4 95 3.0 1.0 2.0 1.3 98 chrX 20269933 intergenic Inx6 - chrX 20269982 intergenic Inx6 - chrX 20270031 intergenic Inx6 - chrX_4_20265001 chrX_20265001 RAL-513 2716 chrX 20271500 20271525 chrX 20271611 20271632 6 106 1.5 0.0 0.8 3.3 132 chrX 20271500 intergenic not near genes chrX 20271566 intergenic not near genes chrX 20271632 intergenic not near genes chrX_6_20270001 chrX_20270001 RAL-513 2717 chrX 20312864 20312908 chrX 20312962 20313006 20 93 3.0 2.5 2.8 5.3 142 chrX 20312864 intron CG1504 - chrX 20312935 intron CG1504 - chrX 20313006 intron CG1504 - chrX_20_20310001 chrX_20310001 RAL-513 2718 chrX 20359128 20359172 chrX 20359215 20359243 15 85 2.0 2.5 2.2 4.7 115 chrX 20359128 intergenic not near genes chrX 20359186 intergenic not near genes chrX 20359243 intergenic not near genes chrX_15_20355001 chrX_20355001 RAL-513 2719 chrX 20374105 20374128 chrX 20374201 20374224 6 93 0.0 5.5 2.8 1.6 119 chrX 20374105 intergenic not near genes chrX 20374164 intergenic not near genes chrX 20374224 intergenic not near genes chrX_6_20370001 chrX_20370001 RAL-513 2720 chrX 20377327 20377345 chrX 20378786 20378793 hobo 6 1473 4.5 5.5 5.0 1.0 1466 chrX 20377327 intergenic not near genes chrX 20378060 intergenic not near genes chrX 20378793 intergenic not near genes chrX_6_20375001 chrX_20375001 RAL-513 2721 chrX 20384241 20384248 chrX 20384344 20384351 5 103 5.0 2.0 3.5 1.1 110 chrX 20384241 intergenic not near genes chrX 20384296 intergenic not near genes chrX 20384351 intergenic not near genes chrX_5_20380001 chrX_20380001 RAL-513 2722 chrX 20384260 20384287 chrX 20384336 20384370 6 85 4.0 1.5 2.8 1.6 110 chrX 20384260 intergenic not near genes chrX 20384315 intergenic not near genes chrX 20384370 intergenic not near genes chrX_6_20380001 chrX_20380001 RAL-513 2723 chrX 20578059 20578101 chrX 20578157 20578184 6 96 1.5 1.5 1.5 2.4 125 chrX 20578059 intergenic not near genes chrX 20578122 intergenic not near genes chrX 20578184 intergenic not near genes chrX_6_20575001 chrX_20575001 RAL-513 2724 chrX 20622846 20622877 chrX 20622961 20622970 6 112 1.5 3.0 2.2 1.9 124 chrX 20622846 intron RunxA - chrX 20622908 intron RunxA - chrX 20622970 intron RunxA - chrX_6_20620001 chrX_20620001 RAL-513 2725 chrX 20635413 20635435 chrX 20635599 20635613 5 182 3.0 3.0 3.0 1.2 200 chrX 20635413 intergenic not near genes chrX 20635513 intergenic not near genes chrX 20635613 intergenic not near genes chrX_5_20635001 chrX_20635001 RAL-513 2726 chrX 20710417 20710427 chrX 20710507 20710513 4 89 1.5 1.0 1.2 1.8 96 chrX 20710417 intergenic not near genes chrX 20710465 intergenic not near genes chrX 20710513 intergenic not near genes chrX_4_20710001 chrX_20710001 RAL-513 2727 chrX 20791558 20791813 chrX 20791664 20791909 4 109 2.5 1.5 2.0 1.3 351 chrX 20791558 intron shakB - chrX 20791734 intron shakB - chrX 20791909 intron shakB - chrX_4_20790001 chrX_20790001 RAL-513 2728 chrX 20915030 20915066 chrX 20915221 20915256 7 183 3.5 0.5 2.0 2.3 226 chrX 20915030 intron shakB - chrX 20915143 intron shakB - chrX 20915256 intron shakB - chrX_7_20915001 chrX_20915001 RAL-513 2729 chrX 20940707 20940736 chrX 20942196 20942222 hobo 10 1484 3.5 2.5 3.0 2.5 1515 chrX 20940707 intergenic not near genes chrX 20941464 intergenic not near genes chrX 20942222 intergenic not near genes chrX_10_20940001 chrX_20940001 RAL-513 2730 chrX 20974179 20974207 chrX 20974383 20974399 7 202 2.5 6.0 4.2 1.3 220 chrX 20974179 intergenic not near genes chrX 20974289 intergenic not near genes chrX 20974399 intergenic not near genes chrX_7_20970001 chrX_20970001 RAL-513 2731 chrX 20981020 20981058 chrX 20981133 20981162 12 118 2.0 3.5 2.8 3.2 142 chrX 20981020 intergenic not near genes chrX 20981091 intergenic not near genes chrX 20981162 intergenic not near genes chrX_12_20980001 chrX_20980001 RAL-513 2732 chrX 21029793 21029810 chrX 21029954 21029971 5 161 3.0 3.5 3.2 1.2 178 chrX 21029793 3` UTR CG1529 - chrX 21029882 3` UTR CG1529 - chrX 21029971 3` UTR CG1529 - chrX_5_21025001 chrX_21025001 RAL-513 2733 chrX 21055683 21055714 chrX 21055778 21055794 4 88 1.5 2.0 1.8 1.4 111 chrX 21055683 intron bves + chrX 21055738 intron bves + chrX 21055794 intron bves + chrX_4_21055001 chrX_21055001 RAL-513 2734 chrX 21061847 21061886 chrX 21062351 21062390 roo 4 504 1.5 4.5 3.0 1.0 543 chrX 21061847 intron bves + chrX 21062118 intron bves + chrX 21062390 intron,3` UTR bves +,CG32512 - chrX_4_21060001 chrX_21060001 RAL-513 2735 chrX 21076326 21076354 chrX 21076409 21076453 7 92 3.5 0.0 1.8 2.5 127 chrX 21076326 intron bves + chrX 21076390 intron bves + chrX 21076453 intron bves + chrX_7_21075001 chrX_21075001 RAL-513 2736 chrX 21086116 21086159 chrX 21087165 21087207 jockey 7 1048 4.5 7.5 6.0 1.0 1091 chrX 21086116 intergenic not near genes chrX 21086662 intergenic not near genes chrX 21087207 intergenic not near genes chrX_7_21085001 chrX_21085001 RAL-513 2737 chrX 21088023 21088072 chrX 21088175 21088224 12 142 3.5 3.0 3.2 2.9 201 chrX 21088023 intergenic not near genes chrX 21088124 intergenic not near genes chrX 21088224 intergenic not near genes chrX_12_21085001 chrX_21085001 RAL-513 2738 chrX 21166128 21166141 chrX 21166225 21166236 4 97 5.0 2.5 3.8 0.8 108 chrX 21166128 intergenic not near genes chrX 21166182 intergenic not near genes chrX 21166236 intergenic not near genes chrX_4_21165001 chrX_21165001 RAL-513 2739 chrX 21176152 21176174 chrX 21177153 21177176 4 1005 23.5 23.5 23.5 0.2 1024 chrX 21176152 intergenic not near genes chrX 21176664 intergenic not near genes chrX 21177176 intergenic not near genes chrX_4_21175001 chrX_21175001 RAL-513 2740 chrX 21176137 21176160 chrX 21177177 21177188 9 1022 21.5 21.0 21.2 0.4 1051 chrX 21176137 intergenic not near genes chrX 21176662 intergenic not near genes chrX 21177188 intergenic not near genes chrX_9_21175001 chrX_21175001 RAL-513 2741 chrX 21358054 21358095 chrX 21358154 21358194 13 97 4.5 3.5 4.0 2.6 140 chrX 21358054 intergenic sol +,Sep1 + chrX 21358124 intergenic Sep1 +,sol + chrX 21358194 intergenic Sep1 +,sol + chrX_13_21355001 chrX_21355001 RAL-513 2742 chrX 21428348 21428368 chrX 21428528 21428578 4 195 2.0 2.0 2.0 1.3 230 chrX 21428348 intron CG42343 - chrX 21428463 intron CG42343 - chrX 21428578 intron CG42343 - chrX_4_21425001 chrX_21425001 RAL-513 2743 chrX 21458678 21458726 chrX 21464134 21464161 Ivk 10 5453 6.0 4.5 5.2 1.6 5483 chrX 21458678 intergenic not near genes chrX 21461420 intergenic not near genes chrX 21464161 intergenic not near genes chrX_10_21460001 chrX_21460001 RAL-513 2744 chrX 21474385 21474430 chrX 21474771 21474815 1731 8 384 2.0 0.5 1.2 3.6 430 chrX 21474385 intergenic not near genes chrX 21474600 intergenic not near genes chrX 21474815 intergenic not near genes chrX_8_21470001 chrX_21470001 RAL-513 2745 chrX 21500556 21500583 chrX 21500776 21500785 5 217 0.0 0.5 0.2 4.2 229 chrX 21500556 intron CR45082 - chrX 21500670 intron CR45082 - chrX 21500785 intron CR45082 - chrX_5_21500001 chrX_21500001 RAL-513 2746 chrX 21516983 21517021 chrX 21517072 21517109 10 90 2.5 3.0 2.8 2.6 126 chrX 21516983 intron CR45082 - chrX 21517046 intron CR45082 - chrX 21517109 intron CR45082 - chrX_10_21515001 chrX_21515001 RAL-513 2747 chrX 21565393 21565438 chrX 21565491 21565536 11 94 4.5 3.0 3.8 2.3 143 chrX 21565393 intergenic not near genes chrX 21565464 intergenic not near genes chrX 21565536 intergenic not near genes chrX_11_21565001 chrX_21565001 RAL-513 2748 chrX 21581545 21581556 chrX 21581642 21581657 4 99 3.0 1.0 2.0 1.3 112 chrX 21581545 intergenic not near genes chrX 21581601 intergenic not near genes chrX 21581657 intergenic not near genes chrX_4_21580001 chrX_21580001 RAL-513 2749 chrX 21668255 21668289 chrX 21668348 21668394 8 92 18.0 16.5 17.2 0.4 139 chrX 21668255 intergenic not near genes chrX 21668324 intergenic not near genes chrX 21668394 intergenic not near genes chrX_8_21665001 chrX_21665001 RAL-513 2750 chrX 22448268 22448295 chrX 22448408 22448454 4 150 2.0 2.0 2.0 1.3 186 chrX 22448268 intron CG14615 - chrX 22448361 intron CG14615 - chrX 22448454 intron CG14615 - chrX_4_22445001 chrX_22445001 RAL-513 2751 chrX 22478877 22478898 chrX 22479030 22479051 6 150 0.0 1.0 0.5 4.0 174 chrX 22478877 intron CG12576 - chrX 22478964 intron CG12576 - chrX 22479051 intron CG12576 - chrX_6_22475001 chrX_22475001 RAL-513 2752 chrX 22522626 22522653 chrX 22525466 22525467 NOF 4 2833 6.0 1.0 3.5 0.9 2841 chrX 22522626 intron CG17600 + chrX 22524046 intron CG17600 + chrX 22525467 intron CG17600 + chrX_4_22520001 chrX_22520001 RAL-513 2753 chrX 22564562 22564572 chrX 22575114 22575149 jockey 10 10558 10.5 8.0 9.2 1.0 10587 chrX 22564562 intergenic not near genes chrX 22569856 intergenic not near genes chrX 22575149 intergenic not near genes chrX_10_22565001 chrX_22565001 RAL-513 2754 chrX 22585509 22585538 chrX 22585605 22585642 4 101 2.0 4.5 3.2 1.0 133 chrX 22585509 intron Cda4 - chrX 22585576 intron Cda4 - chrX 22585642 intron Cda4 - chrX_4_22585001 chrX_22585001 RAL-513 2755 chrX 22660553 22660567 chrX 22660657 22660671 4 104 10.5 0.5 5.5 0.6 118 chrX 22660553 intron CR44997 + chrX 22660612 intron CR44997 + chrX 22660671 intron CR44997 + chrX_4_22660001 chrX_22660001 RAL-513 2756 chrX 22660568 22660584 chrX 22660653 22660673 4 92 7.0 0.5 3.8 0.8 105 chrX 22660568 intron CR44997 + chrX 22660620 intron CR44997 + chrX 22660673 intron CR44997 + chrX_4_22660001 chrX_22660001 RAL-513 2757 chrX 22661976 22662007 chrX 22662089 22662124 5 109 0.0 1.0 0.5 3.3 148 chrX 22661976 intron CR44997 + chrX 22662050 intron CR44997 + chrX 22662124 intron CR44997 + chrX_5_22660001 chrX_22660001 RAL-513 2758 chrX 22697485 22697520 chrX 22701800 22701836 Juan 8 4315 4.5 6.0 5.2 1.3 4351 chrX 22697485 intron CR44997 + chrX 22699660 intron CR44997 + chrX 22701836 intron CR44997 + chrX_8_22695001 chrX_22695001 RAL-513 2759 chrX 22797013 22797025 chrX 22797088 22797123 4 96 0.5 3.0 1.8 1.4 110 chrX 22797013 intron CR44997 + chrX 22797068 intron CR44997 + chrX 22797123 intron CR44997 + chrX_4_22795001 chrX_22795001 RAL-513 2760 chrX 22811990 22812004 chrX 22816768 22816797 F-element 5 4789 7.5 5.5 6.5 0.7 4807 chrX 22811990 intergenic CG12446 - chrX 22814394 intergenic not near genes chrX 22816797 intergenic not near genes chrX_5_22810001 chrX_22810001 RAL-513 2761 chrX 22891119 22891125 chrX 22891222 22891228 4 103 2.0 1.0 1.5 1.6 109 chrX 22891119 intergenic not near genes chrX 22891174 intergenic not near genes chrX 22891228 intergenic not near genes chrX_4_22890001 chrX_22890001 RAL-513 2762 chrX 22922498 22922539 chrX 22922598 22922609 7 83 3.5 5.0 4.2 1.3 111 chrX 22922498 intergenic not near genes chrX 22922554 intergenic not near genes chrX 22922609 intergenic not near genes chrX_7_22920001 chrX_22920001 RAL-513 2763 chrX 22987102 22987133 chrX 22989767 22989786 Burdock 5 2671 2.5 3.5 3.0 1.2 2684 chrX 22987102 intron,intron stnA -,stnB - chrX 22988444 intron,intron stnA -,stnB - chrX 22989786 intron,intron stnA -,stnB - chrX_5_22985001 chrX_22985001 RAL-513 2764 chrX 22992374 22992426 chrX 22992525 22992571 7 141 1.0 1.0 1.0 3.5 197 chrX 22992374 intron,intron stnA -,stnB - chrX 22992472 intron,intron stnA -,stnB - chrX 22992571 3` UTR,exon stnA -,stnB - chrX_7_22990001 chrX_22990001 RAL-513 2765 chrX 22996303 22996339 chrX 23003550 23003591 roo 12 7251 4.5 1.0 2.8 3.2 7288 chrX 22996303 intron,intron stnA -,stnB - chrX 22999947 intron,intron stnA -,stnB - chrX 23003591 intron,intron stnA -,stnB - chrX_12_22995001 chrX_22995001 RAL-513 2766 chrY 655963 655968 chrY 656131 656135 4 182 1.0 0.5 0.8 2.2 172 chrY 655963 intron kl-2 + chrY 656049 intron kl-2 + chrY 656135 exon kl-2 + chrY_4_655001 chrY_655001 RAL-513 2767 chrY 975805 975821 chrY 975871 975946 6 100 122.0 130.5 126.2 0.0 141 chrY 975805 intergenic not near genes chrY 975876 intergenic not near genes chrY 975946 intergenic not near genes chrY_6_975001 chrY_975001 RAL-513