SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 47445 47488 chr2L 52570 52613 jockey 16 5121 7.5 6.5 7.0 2.0 5168 chr2L 47445 intron Cda5 - chr2L 50029 intron Cda5 - chr2L 52613 intron Cda5 - chr2L_16_50001 chr2L_50001 RAL-508 2 chr2L 73774 73787 chr2L 73903 73916 4 128 15.0 8.0 11.5 0.3 142 chr2L 73774 3` UTR,intron CR44987 -,galectin + chr2L 73845 intron galectin + chr2L 73916 intron galectin + chr2L_4_70001 chr2L_70001 RAL-508 3 chr2L 73788 73804 chr2L 73901 73928 6 123 10.0 7.5 8.8 0.6 140 chr2L 73788 3` UTR,intron CR44987 -,galectin + chr2L 73858 intron galectin + chr2L 73928 intron galectin + chr2L_6_70001 chr2L_70001 RAL-508 4 chr2L 263280 263318 chr2L 263446 263484 24 166 4.5 8.0 6.2 3.3 204 chr2L 263280 intron,3` UTR CG3645 -,CG17075 - chr2L 263382 intron,3` UTR CG3645 -,CG17075 - chr2L 263484 intron,3` UTR CG3645 -,CG17075 - chr2L_24_260001 chr2L_260001 RAL-508 5 chr2L 263065 263091 chr2L 267667 267705 10 4604 21.0 25.0 23.0 0.4 4640 chr2L 263065 intron,3` UTR CG3645 -,CG17075 - chr2L 265385 intron,exon CG3645 -,CG17075 - chr2L 267705 intron CG3645 - chr2L_10_265001 chr2L_265001 RAL-508 6 chr2L 347865 347919 chr2L 355385 355437 blood 18 7518 3.0 3.0 3.0 4.5 7572 chr2L 347865 3` UTR Plc21C + chr2L 351651 intron Plc21C + chr2L 355437 3` UTR Plc21C + chr2L_18_350001 chr2L_350001 RAL-508 7 chr2L 395734 395743 chr2L 395826 395845 7 100 9.0 4.0 6.5 0.9 111 chr2L 395734 intergenic CR43718 + chr2L 395790 intergenic CR43718 + chr2L 395845 intergenic CR43718 + chr2L_7_395001 chr2L_395001 RAL-508 8 chr2L 395744 395777 chr2L 395824 395879 17 90 3.0 4.0 3.5 3.8 135 chr2L 395744 intergenic CR43718 + chr2L 395812 intergenic CR43718 + chr2L 395879 intergenic CR43718 + chr2L_17_395001 chr2L_395001 RAL-508 9 chr2L 628472 628525 chr2L 628616 628661 12 137 6.0 3.0 4.5 2.2 189 chr2L 628472 intergenic CR45369 +,CG2839 + chr2L 628566 intergenic CR45369 +,CG2839 + chr2L 628661 intergenic CR45369 +,CG2839 + chr2L_12_625001 chr2L_625001 RAL-508 10 chr2L 763585 763622 chr2L 763680 763718 6 86 3.0 3.0 3.0 1.5 133 chr2L 763585 intergenic not near genes chr2L 763652 intergenic not near genes chr2L 763718 intergenic not near genes chr2L_6_760001 chr2L_760001 RAL-508 11 chr2L 770459 770494 chr2L 772245 772294 Bari1 14 1791 4.5 4.5 4.5 2.5 1835 chr2L 770459 intergenic not near genes chr2L 771376 intergenic not near genes chr2L 772294 intergenic CR44614 + chr2L_14_770001 chr2L_770001 RAL-508 12 chr2L 791435 791459 chr2L 791549 791569 4 112 4.0 3.0 3.5 0.9 134 chr2L 791435 intergenic not near genes chr2L 791502 intergenic not near genes chr2L 791569 intergenic not near genes chr2L_4_790001 chr2L_790001 RAL-508 13 chr2L 795242 795254 chr2L 795371 795381 5 129 9.0 0.0 4.5 0.9 139 chr2L 795242 intergenic not near genes chr2L 795312 intergenic not near genes chr2L 795381 intergenic not near genes chr2L_5_795001 chr2L_795001 RAL-508 14 chr2L 795256 795292 chr2L 795369 795432 8 130 2.5 0.0 1.2 3.6 176 chr2L 795256 intergenic not near genes chr2L 795344 intergenic not near genes chr2L 795432 intergenic not near genes chr2L_8_795001 chr2L_795001 RAL-508 15 chr2L 849458 849470 chr2L 849569 849581 4 111 7.0 1.0 4.0 0.8 123 chr2L 849458 intron drongo - chr2L 849520 intron drongo - chr2L 849581 intron drongo - chr2L_4_845001 chr2L_845001 RAL-508 16 chr2L 926893 926932 chr2L 927126 927168 10 237 4.0 2.5 3.2 2.4 275 chr2L 926893 intron CG4341 + chr2L 927030 intron CG4341 + chr2L 927168 intron CG4341 + chr2L_10_925001 chr2L_925001 RAL-508 17 chr2L 958138 958175 chr2L 958234 958270 4 95 7.5 5.0 6.2 0.6 132 chr2L 958138 intergenic CG4341 + chr2L 958204 intergenic CG4341 + chr2L 958270 intergenic CG4341 + chr2L_4_955001 chr2L_955001 RAL-508 18 chr2L 1042588 1042599 chr2L 1042699 1042709 6 111 0.0 0.0 0.0 6.0 121 chr2L 1042588 intron IA-2 - chr2L 1042648 intron IA-2 - chr2L 1042709 intron IA-2 - chr2L_6_1040001 chr2L_1040001 RAL-508 19 chr2L 1089949 1090002 chr2L 1090165 1090218 9 209 1.5 2.5 2.0 3.0 269 chr2L 1089949 intron CG4629 - chr2L 1090084 intron CG4629 - chr2L 1090218 intron CG4629 - chr2L_9_1090001 chr2L_1090001 RAL-508 20 chr2L 1090363 1090379 chr2L 1090473 1090478 4 107 0.0 2.0 1.0 2.0 115 chr2L 1090363 intron CG4629 - chr2L 1090420 intron CG4629 - chr2L 1090478 intron CG4629 - chr2L_4_1090001 chr2L_1090001 RAL-508 21 chr2L 1121130 1121167 chr2L 1121218 1121263 11 89 3.0 4.5 3.8 2.3 133 chr2L 1121130 intron Pino - chr2L 1121196 intron Pino - chr2L 1121263 intron Pino - chr2L_11_1120001 chr2L_1120001 RAL-508 22 chr2L 1137635 1137684 chr2L 1137833 1137884 11 199 7.5 5.5 6.5 1.5 249 chr2L 1137635 intron CG4577 + chr2L 1137760 intron CG4577 + chr2L 1137884 intron CG4577 + chr2L_11_1135001 chr2L_1135001 RAL-508 23 chr2L 1220115 1220157 chr2L 1227601 1227643 blood 8 7486 5.0 6.5 5.8 1.2 7528 chr2L 1220115 intron CG42329 + chr2L 1223879 intron CG42329 + chr2L 1227643 intron CG42329 + chr2L_8_1220001 chr2L_1220001 RAL-508 24 chr2L 1261139 1261255 chr2L 1261241 1261339 7 99 0.0 0.0 0.0 7.0 200 chr2L 1261139 intron robo3 + chr2L 1261239 intron robo3 + chr2L 1261339 intron robo3 + chr2L_7_1260001 chr2L_1260001 RAL-508 25 chr2L 1322004 1322047 chr2L 1322113 1322144 8 107 3.0 2.0 2.5 2.3 140 chr2L 1322004 intergenic not near genes chr2L 1322074 intergenic not near genes chr2L 1322144 intergenic not near genes chr2L_8_1320001 chr2L_1320001 RAL-508 26 chr2L 1512615 1512663 chr2L 1512894 1512942 14 277 3.5 5.0 4.2 2.7 327 chr2L 1512615 intergenic not near genes chr2L 1512778 intergenic not near genes chr2L 1512942 intergenic not near genes chr2L_14_1510001 chr2L_1510001 RAL-508 27 chr2L 1570672 1570703 chr2L 1573564 1573593 F-element 8 2892 6.0 3.0 4.5 1.5 2921 chr2L 1570672 intron haf + chr2L 1572132 intron haf + chr2L 1573593 intron haf + chr2L_8_1570001 chr2L_1570001 RAL-508 28 chr2L 1580290 1580325 chr2L 1580518 1580553 7 228 4.5 3.0 3.8 1.5 263 chr2L 1580290 intron haf + chr2L 1580422 intron haf + chr2L 1580553 intron haf + chr2L_7_1580001 chr2L_1580001 RAL-508 29 chr2L 1590620 1590674 chr2L 1590733 1590786 16 108 5.0 6.5 5.8 2.4 166 chr2L 1590620 intron haf + chr2L 1590703 intron haf + chr2L 1590786 intron haf + chr2L_16_1590001 chr2L_1590001 RAL-508 30 chr2L 1590944 1590991 chr2L 1591040 1591086 9 96 2.0 4.0 3.0 2.2 142 chr2L 1590944 intron haf + chr2L 1591015 intron haf + chr2L 1591086 intron haf + chr2L_9_1590001 chr2L_1590001 RAL-508 31 chr2L 1593103 1593143 chr2L 1593202 1593226 12 103 1.5 2.5 2.0 4.0 123 chr2L 1593103 intron haf + chr2L 1593164 intron haf + chr2L 1593226 intron haf + chr2L_12_1590001 chr2L_1590001 RAL-508 32 chr2L 1631260 1631303 chr2L 1631459 1631506 5 196 0.0 1.0 0.5 3.3 246 chr2L 1631260 intergenic not near genes chr2L 1631383 intergenic not near genes chr2L 1631506 intergenic not near genes chr2L_5_1630001 chr2L_1630001 RAL-508 33 chr2L 1646094 1646114 chr2L 1646193 1646195 4 94 4.0 3.5 3.8 0.8 101 chr2L 1646094 intergenic not near genes chr2L 1646144 intergenic not near genes chr2L 1646195 intergenic not near genes chr2L_4_1645001 chr2L_1645001 RAL-508 34 chr2L 1662004 1662020 chr2L 1662109 1662125 5 105 7.0 0.0 3.5 1.1 121 chr2L 1662004 intron chinmo + chr2L 1662064 intron chinmo + chr2L 1662125 intron chinmo + chr2L_5_1660001 chr2L_1660001 RAL-508 35 chr2L 1678956 1678990 chr2L 1686441 1686442 blood 12 7482 2.5 4.0 3.2 2.9 7486 chr2L 1678956 intron chinmo + chr2L 1682699 intron chinmo + chr2L 1686442 intron chinmo + chr2L_12_1680001 chr2L_1680001 RAL-508 36 chr2L 1721817 1721847 chr2L 1721913 1721940 4 99 0.0 3.0 1.5 1.6 123 chr2L 1721817 intron Rim2 - chr2L 1721878 intron Rim2 - chr2L 1721940 intron Rim2 - chr2L_4_1720001 chr2L_1720001 RAL-508 37 chr2L 1724791 1724832 chr2L 1724893 1724931 8 102 4.5 4.0 4.2 1.5 140 chr2L 1724791 3` UTR Eno - chr2L 1724861 3` UTR Eno - chr2L 1724931 3` UTR Eno - chr2L_8_1720001 chr2L_1720001 RAL-508 38 chr2L 1781107 1781126 chr2L 1781276 1781298 13 171 13.0 30.0 21.5 0.6 191 chr2L 1781107 intergenic not near genes chr2L 1781202 intergenic not near genes chr2L 1781298 intergenic not near genes chr2L_13_1780001 chr2L_1780001 RAL-508 39 chr2L 1841056 1841092 chr2L 1841160 1841196 5 102 3.5 5.0 4.2 1.0 140 chr2L 1841056 intron wry + chr2L 1841126 intron wry + chr2L 1841196 intron wry + chr2L_5_1840001 chr2L_1840001 RAL-508 40 chr2L 1856237 1856257 chr2L 1856375 1856396 7 139 2.0 5.0 3.5 1.6 159 chr2L 1856237 intron wry + chr2L 1856316 intron wry + chr2L 1856396 intron wry + chr2L_7_1855001 chr2L_1855001 RAL-508 41 chr2L 1883404 1883447 chr2L 1884006 1884041 9 600 1.0 4.0 2.5 2.6 637 chr2L 1883404 intron CG15358 - chr2L 1883722 intron CG15358 - chr2L 1884041 exon CG15358 - chr2L_9_1880001 chr2L_1880001 RAL-508 42 chr2L 2010483 2010518 chr2L 2010606 2010641 7 123 5.5 5.0 5.2 1.1 158 chr2L 2010483 intron CG4238 + chr2L 2010562 intron CG4238 + chr2L 2010641 intron CG4238 + chr2L_7_2010001 chr2L_2010001 RAL-508 43 chr2L 2100376 2100381 chr2L 2109546 2109552 roo 4 9170 5.0 3.0 4.0 0.8 9176 chr2L 2100376 intron dpr3 - chr2L 2104964 intron dpr3 - chr2L 2109552 intron dpr3 - chr2L_4_2100001 chr2L_2100001 RAL-508 44 chr2L 2100382 2100404 chr2L 2109528 2109552 roo 8 9158 3.0 1.0 2.0 2.7 9170 chr2L 2100382 intron dpr3 - chr2L 2104967 intron dpr3 - chr2L 2109552 intron dpr3 - chr2L_8_2100001 chr2L_2100001 RAL-508 45 chr2L 2256452 2256478 chr2L 2256552 2256578 6 100 0.5 3.5 2.0 2.0 126 chr2L 2256452 intergenic not near genes chr2L 2256515 intergenic not near genes chr2L 2256578 intergenic not near genes chr2L_6_2255001 chr2L_2255001 RAL-508 46 chr2L 2262292 2262324 chr2L 2262389 2262416 7 96 4.0 2.0 3.0 1.8 124 chr2L 2262292 intergenic not near genes chr2L 2262354 intergenic not near genes chr2L 2262416 intergenic not near genes chr2L_7_2260001 chr2L_2260001 RAL-508 47 chr2L 2290567 2290616 chr2L 2290656 2290670 10 90 2.5 3.5 3.0 2.5 103 chr2L 2290567 exon robl22E - chr2L 2290618 exon robl22E - chr2L 2290670 intron robl22E - chr2L_10_2290001 chr2L_2290001 RAL-508 48 chr2L 2317112 2317129 chr2L 2317303 2317320 5 190 21.0 21.0 21.0 0.2 208 chr2L 2317112 intron,intron CG9967 -,eys + chr2L 2317216 intron,intron CG9967 -,eys + chr2L 2317320 intron,intron CG9967 -,eys + chr2L_5_2315001 chr2L_2315001 RAL-508 49 chr2L 2318889 2318903 chr2L 2318961 2319000 6 88 3.5 6.0 4.8 1.0 111 chr2L 2318889 intron,intron CG9967 -,eys + chr2L 2318944 intron,intron CG9967 -,eys + chr2L 2319000 intron,intron CG9967 -,eys + chr2L_6_2315001 chr2L_2315001 RAL-508 50 chr2L 2372347 2372367 chr2L 2372450 2372473 6 103 4.0 1.5 2.8 1.6 126 chr2L 2372347 intergenic CG3609 - chr2L 2372410 intergenic CG3609 - chr2L 2372473 3` UTR CG3609 - chr2L_6_2370001 chr2L_2370001 RAL-508 51 chr2L 2398936 2398956 chr2L 2399010 2399023 7 82 0.5 4.5 2.5 2.0 87 chr2L 2398936 intron VGlut + chr2L 2398980 intron VGlut + chr2L 2399023 intron VGlut + chr2L_7_2395001 chr2L_2395001 RAL-508 52 chr2L 2503513 2503563 chr2L 2503629 2503677 12 110 5.5 5.5 5.5 1.8 164 chr2L 2503513 intergenic not near genes chr2L 2503595 intergenic not near genes chr2L 2503677 intergenic not near genes chr2L_12_2500001 chr2L_2500001 RAL-508 53 chr2L 2565519 2565566 chr2L 2571607 2571654 297 10 6087 3.0 2.0 2.5 2.9 6135 chr2L 2565519 exon Cyp309a2 - chr2L 2568586 intron Cyp309a2 - chr2L 2571654 exon Cyp309a2 - chr2L_10_2565001 chr2L_2565001 RAL-508 54 chr2L 2587804 2587848 chr2L 2587893 2587940 12 92 2.5 3.5 3.0 3.0 136 chr2L 2587804 intergenic not near genes chr2L 2587872 intergenic not near genes chr2L 2587940 intergenic not near genes chr2L_12_2585001 chr2L_2585001 RAL-508 55 chr2L 2605726 2605760 chr2L 2605835 2605856 9 108 5.5 3.5 4.5 1.6 130 chr2L 2605726 intergenic not near genes chr2L 2605791 intergenic not near genes chr2L 2605856 intergenic not near genes chr2L_9_2605001 chr2L_2605001 RAL-508 56 chr2L 2618016 2618048 chr2L 2618115 2618139 10 98 5.0 3.5 4.2 1.9 123 chr2L 2618016 intergenic not near genes chr2L 2618078 intergenic not near genes chr2L 2618139 intergenic not near genes chr2L_10_2615001 chr2L_2615001 RAL-508 57 chr2L 2620640 2620649 chr2L 2620761 2620773 5 124 0.0 3.5 1.8 1.8 133 chr2L 2620640 3` UTR CG43403 + chr2L 2620706 3` UTR CG43403 + chr2L 2620773 3` UTR CG43403 + chr2L_5_2620001 chr2L_2620001 RAL-508 58 chr2L 2661177 2661227 chr2L 2663034 2663068 I-element 6 1847 0.0 3.0 1.5 2.4 1891 chr2L 2661177 intergenic not near genes chr2L 2662122 intergenic not near genes chr2L 2663068 intergenic not near genes chr2L_6_2660001 chr2L_2660001 RAL-508 59 chr2L 2667604 2667660 chr2L 2667702 2667759 20 93 2.0 3.5 2.8 5.3 155 chr2L 2667604 intergenic not near genes chr2L 2667682 intergenic not near genes chr2L 2667759 intergenic not near genes chr2L_20_2665001 chr2L_2665001 RAL-508 60 chr2L 2698857 2698894 chr2L 2698953 2699001 7 103 0.5 3.0 1.8 2.5 144 chr2L 2698857 intron CG31690 + chr2L 2698929 intron CG31690 + chr2L 2699001 intron CG31690 + chr2L_7_2695001 chr2L_2695001 RAL-508 61 chr2L 2836141 2836168 chr2L 2836220 2836243 11 90 2.0 1.0 1.5 4.4 102 chr2L 2836141 intron CG3119 - chr2L 2836192 intron CG3119 - chr2L 2836243 intron CG3119 - chr2L_11_2835001 chr2L_2835001 RAL-508 62 chr2L 2873460 2873467 chr2L 2873555 2873564 4 96 0.0 14.0 7.0 0.5 104 chr2L 2873460 intron CG31694 - chr2L 2873512 intron CG31694 - chr2L 2873564 intron CG31694 - chr2L_4_2870001 chr2L_2870001 RAL-508 63 chr2L 2909879 2909932 chr2L 2909983 2910036 16 97 2.5 2.0 2.2 5.0 157 chr2L 2909879 intron lilli + chr2L 2909958 intron lilli + chr2L 2910036 intron lilli + chr2L_16_2905001 chr2L_2905001 RAL-508 64 chr2L 2932468 2932510 chr2L 2932784 2932825 12 310 3.5 4.0 3.8 2.5 357 chr2L 2932468 intron lilli + chr2L 2932646 intron lilli + chr2L 2932825 intron lilli + chr2L_12_2930001 chr2L_2930001 RAL-508 65 chr2L 2933290 2933316 chr2L 2935479 2935514 pogo 7 2195 2.0 2.5 2.2 2.2 2224 chr2L 2933290 intron lilli + chr2L 2934402 intron lilli + chr2L 2935514 intron lilli + chr2L_7_2930001 chr2L_2930001 RAL-508 66 chr2L 3008887 3008940 chr2L 3009015 3009055 15 128 4.0 5.5 4.8 2.6 168 chr2L 3008887 intron CG17265 + chr2L 3008971 intron CG17265 + chr2L 3009055 intron CG17265 + chr2L_15_3005001 chr2L_3005001 RAL-508 67 chr2L 3073010 3073064 chr2L 3078233 3078287 copia 15 5220 2.5 5.0 3.8 3.1 5277 chr2L 3073010 intron toc - chr2L 3075648 intron toc - chr2L 3078287 intron toc - chr2L_15_3075001 chr2L_3075001 RAL-508 68 chr2L 3108848 3108873 chr2L 3108945 3108966 15 96 5.0 3.5 4.2 2.9 118 chr2L 3108848 exon toc - chr2L 3108907 intron toc - chr2L 3108966 intron toc - chr2L_15_3105001 chr2L_3105001 RAL-508 69 chr2L 3108876 3108894 chr2L 3108944 3108991 8 93 3.0 3.5 3.2 1.9 115 chr2L 3108876 intron toc - chr2L 3108934 intron toc - chr2L 3108991 intron toc - chr2L_8_3105001 chr2L_3105001 RAL-508 70 chr2L 3134284 3134291 chr2L 3134380 3134387 5 96 5.0 8.5 6.8 0.6 103 chr2L 3134284 intron toc - chr2L 3134336 intron toc - chr2L 3134387 intron toc - chr2L_5_3130001 chr2L_3130001 RAL-508 71 chr2L 3134931 3134957 chr2L 3135028 3135054 9 95 2.5 4.0 3.2 2.1 123 chr2L 3134931 intron toc - chr2L 3134992 intron toc - chr2L 3135054 intron toc - chr2L_9_3130001 chr2L_3130001 RAL-508 72 chr2L 3147261 3147306 chr2L 3147350 3147372 11 91 5.0 2.0 3.5 2.4 111 chr2L 3147261 3` UTR Mad - chr2L 3147316 3` UTR Mad - chr2L 3147372 3` UTR Mad - chr2L_11_3145001 chr2L_3145001 RAL-508 73 chr2L 3192205 3192239 chr2L 3192336 3192367 10 127 3.0 7.5 5.2 1.6 162 chr2L 3192205 exon CG34393 - chr2L 3192286 intron CG34393 - chr2L 3192367 intron CG34393 - chr2L_10_3190001 chr2L_3190001 RAL-508 74 chr2L 3202719 3202769 chr2L 3210168 3210218 mdg1 14 7448 3.5 2.5 3.0 3.5 7499 chr2L 3202719 intergenic not near genes chr2L 3206468 intergenic not near genes chr2L 3210218 intergenic CR45336 + chr2L_14_3205001 chr2L_3205001 RAL-508 75 chr2L 3251481 3251514 chr2L 3259065 3259099 springer 18 7585 6.5 7.0 6.8 2.3 7618 chr2L 3251481 intergenic not near genes chr2L 3255290 intergenic not near genes chr2L 3259099 intergenic not near genes chr2L_18_3255001 chr2L_3255001 RAL-508 76 chr2L 3291228 3291267 chr2L 3291328 3291367 7 98 2.0 8.0 5.0 1.2 139 chr2L 3291228 intergenic CG9664 - chr2L 3291298 3` UTR CG9664 - chr2L 3291367 3` UTR CG9664 - chr2L_7_3290001 chr2L_3290001 RAL-508 77 chr2L 3312081 3312109 chr2L 3312206 3312234 6 124 0.0 7.0 3.5 1.3 153 chr2L 3312081 intron CG3277 + chr2L 3312158 intron CG3277 + chr2L 3312234 intron CG3277 + chr2L_6_3310001 chr2L_3310001 RAL-508 78 chr2L 3388588 3388628 chr2L 3388849 3388889 pogo 7 261 2.0 3.0 2.5 2.0 301 chr2L 3388588 intergenic CG42460 - chr2L 3388738 intergenic CG42460 - chr2L 3388889 intergenic CG42460 -,CR44791 + chr2L_7_3385001 chr2L_3385001 RAL-508 79 chr2L 3393528 3393579 chr2L 3393659 3393707 16 129 3.5 5.0 4.2 3.1 179 chr2L 3393528 intergenic not near genes chr2L 3393618 intergenic not near genes chr2L 3393707 intergenic not near genes chr2L_16_3390001 chr2L_3390001 RAL-508 80 chr2L 3470303 3470331 chr2L 3470398 3470430 6 88 6.5 6.0 6.2 0.8 127 chr2L 3470303 exon CG31776 + chr2L 3470366 exon CG31776 + chr2L 3470430 exon CG31776 + chr2L_6_3470001 chr2L_3470001 RAL-508 81 chr2L 3540433 3540450 chr2L 3540538 3540555 4 106 2.0 5.5 3.8 0.8 122 chr2L 3540433 intron drm + chr2L 3540494 intron drm + chr2L 3540555 intron drm + chr2L_4_3540001 chr2L_3540001 RAL-508 82 chr2L 3548570 3548612 chr2L 3548666 3548710 11 98 2.0 2.5 2.2 3.4 140 chr2L 3548570 intergenic drm + chr2L 3548640 intergenic drm + chr2L 3548710 intergenic drm + chr2L_11_3545001 chr2L_3545001 RAL-508 83 chr2L 3550214 3550254 chr2L 3550314 3550345 15 99 3.0 0.5 1.8 5.4 131 chr2L 3550214 intergenic not near genes chr2L 3550280 intergenic not near genes chr2L 3550345 intergenic not near genes chr2L_15_3550001 chr2L_3550001 RAL-508 84 chr2L 3603607 3603645 chr2L 3603723 3603761 19 114 6.0 3.5 4.8 3.3 154 chr2L 3603607 intergenic not near genes chr2L 3603684 intergenic not near genes chr2L 3603761 intergenic odd - chr2L_19_3600001 chr2L_3600001 RAL-508 85 chr2L 3632344 3632388 chr2L 3632487 3632526 23 142 5.0 7.0 6.0 3.3 182 chr2L 3632344 intron for - chr2L 3632435 intron for - chr2L 3632526 intron for - chr2L_23_3630001 chr2L_3630001 RAL-508 86 chr2L 3649773 3649797 chr2L 3654995 3655005 copia 6 5218 0.0 3.0 1.5 2.4 5232 chr2L 3649773 intron for - chr2L 3652389 intron for - chr2L 3655005 intron for - chr2L_6_3650001 chr2L_3650001 RAL-508 87 chr2L 3659770 3659789 chr2L 3659869 3659872 4 95 3.0 7.0 5.0 0.7 102 chr2L 3659770 intergenic not near genes chr2L 3659821 intergenic not near genes chr2L 3659872 intergenic not near genes chr2L_4_3655001 chr2L_3655001 RAL-508 88 chr2L 3784701 3784992 chr2L 3785632 3785678 4 804 6.5 16.5 11.5 0.3 977 chr2L 3784701 intergenic CG31960 + chr2L 3785190 exon CG31960 + chr2L 3785678 intergenic CG31960 +,CG31958 + chr2L_4_3785001 chr2L_3785001 RAL-508 89 chr2L 3844327 3844348 chr2L 3844459 3844464 5 127 5.0 4.5 4.8 0.9 137 chr2L 3844327 intergenic not near genes chr2L 3844396 intergenic not near genes chr2L 3844464 intergenic not near genes chr2L_5_3840001 chr2L_3840001 RAL-508 90 chr2L 3891876 3891927 chr2L 3891979 3892011 17 102 4.5 3.5 4.0 3.4 135 chr2L 3891876 intron capu - chr2L 3891944 intron capu - chr2L 3892011 intron capu - chr2L_17_3890001 chr2L_3890001 RAL-508 91 chr2L 3898253 3898308 chr2L 3898355 3898406 7 100 0.0 2.5 1.2 3.2 153 chr2L 3898253 intron capu - chr2L 3898330 intron capu - chr2L 3898406 intron capu - chr2L_7_3895001 chr2L_3895001 RAL-508 92 chr2L 3936604 3936650 chr2L 3936702 3936750 5 98 4.5 0.0 2.2 1.6 146 chr2L 3936604 intron fred - chr2L 3936677 intron fred - chr2L 3936750 intron fred - chr2L_5_3935001 chr2L_3935001 RAL-508 93 chr2L 3937149 3937197 chr2L 3937284 3937332 10 135 1.5 4.0 2.8 2.6 183 chr2L 3937149 intron fred - chr2L 3937240 intron fred - chr2L 3937332 intron fred - chr2L_10_3935001 chr2L_3935001 RAL-508 94 chr2L 3959153 3959201 chr2L 3959248 3959297 10 95 4.5 4.5 4.5 1.8 144 chr2L 3959153 intron fred - chr2L 3959225 intron fred - chr2L 3959297 intron fred - chr2L_10_3955001 chr2L_3955001 RAL-508 95 chr2L 4014635 4014684 chr2L 4014798 4014846 12 160 3.5 4.5 4.0 2.4 211 chr2L 4014635 intergenic not near genes chr2L 4014740 intergenic not near genes chr2L 4014846 intergenic not near genes chr2L_12_4010001 chr2L_4010001 RAL-508 96 chr2L 4037782 4037808 chr2L 4037889 4037909 7 106 4.0 4.0 4.0 1.4 127 chr2L 4037782 intron ed + chr2L 4037846 intron ed + chr2L 4037909 intron ed + chr2L_7_4035001 chr2L_4035001 RAL-508 97 chr2L 4066028 4066056 chr2L 4068873 4068901 Juan 4 2840 3.5 4.0 3.8 0.8 2873 chr2L 4066028 intron ed + chr2L 4067464 intron ed + chr2L 4068901 intron ed + chr2L_4_4065001 chr2L_4065001 RAL-508 98 chr2L 4152252 4152252 chr2L 16217660 16217660 6 12065408 12.0 32.0 22.0 0.3 12065408 chr2L 4152252 intergenic not near genes chr2L 10184956 exon Sur - chr2L 16217660 intergenic not near genes chr2L_6_10180001 chr2L_10180001 RAL-508 99 chr2L 4171492 4171530 chr2L 4171587 4171598 5 80 3.5 5.0 4.2 1.0 106 chr2L 4171492 intergenic not near genes chr2L 4171545 intergenic not near genes chr2L 4171598 intergenic not near genes chr2L_5_4170001 chr2L_4170001 RAL-508 100 chr2L 4180118 4180131 chr2L 4180207 4180227 8 94 2.0 1.5 1.8 2.9 109 chr2L 4180118 intergenic not near genes chr2L 4180172 intergenic not near genes chr2L 4180227 intergenic not near genes chr2L_8_4180001 chr2L_4180001 RAL-508 101 chr2L 4184456 4184506 chr2L 4184795 4184845 6 339 2.0 0.5 1.2 2.7 389 chr2L 4184456 intergenic not near genes chr2L 4184650 intergenic not near genes chr2L 4184845 intergenic not near genes chr2L_6_4180001 chr2L_4180001 RAL-508 102 chr2L 4244040 4244055 chr2L 4244139 4244153 4 99 3.0 6.0 4.5 0.7 113 chr2L 4244040 intergenic not near genes chr2L 4244096 intergenic not near genes chr2L 4244153 intergenic not near genes chr2L_4_4240001 chr2L_4240001 RAL-508 103 chr2L 4351458 4351478 chr2L 4351554 4351574 9 95 8.5 5.5 7.0 1.1 116 chr2L 4351458 intergenic CR44700 + chr2L 4351516 intergenic CR44700 + chr2L 4351574 intergenic CR44700 + chr2L_9_4350001 chr2L_4350001 RAL-508 104 chr2L 4351479 4351501 chr2L 4351551 4351597 10 86 4.0 5.0 4.5 1.8 118 chr2L 4351479 intergenic CR44700 + chr2L 4351538 intergenic CR44700 + chr2L 4351597 intergenic CR44700 + chr2L_10_4350001 chr2L_4350001 RAL-508 105 chr2L 4355469 4355474 chr2L 4355573 4355578 5 104 11.0 2.5 6.8 0.6 109 chr2L 4355469 intergenic not near genes chr2L 4355524 intergenic not near genes chr2L 4355578 intergenic not near genes chr2L_5_4355001 chr2L_4355001 RAL-508 106 chr2L 4355475 4355506 chr2L 4355570 4355608 5 100 3.5 1.5 2.5 1.4 133 chr2L 4355475 intergenic not near genes chr2L 4355542 intergenic not near genes chr2L 4355608 intergenic not near genes chr2L_5_4355001 chr2L_4355001 RAL-508 107 chr2L 4360019 4360035 chr2L 4360195 4360212 4 177 5.5 4.0 4.8 0.7 193 chr2L 4360019 intergenic not near genes chr2L 4360116 intergenic not near genes chr2L 4360212 intergenic not near genes chr2L_4_4360001 chr2L_4360001 RAL-508 108 chr2L 4386112 4386153 chr2L 4386239 4386278 7 122 1.0 1.5 1.2 3.2 166 chr2L 4386112 intergenic CG3338 -,Psf2 - chr2L 4386195 3` UTR Psf2 - chr2L 4386278 3` UTR Psf2 - chr2L_7_4385001 chr2L_4385001 RAL-508 109 chr2L 4438607 4438619 chr2L 4439060 4439070 5 451 0.0 3.0 1.5 2.0 463 chr2L 4438607 intron CG15431 - chr2L 4438838 intron CG15431 - chr2L 4439070 intron CG15431 - chr2L_5_4435001 chr2L_4435001 RAL-508 110 chr2L 4601686 4601736 chr2L 4609145 4609196 mdg1 12 7460 5.0 3.5 4.2 2.3 7510 chr2L 4601686 intron dp - chr2L 4605441 intron dp - chr2L 4609196 intron dp - chr2L_12_4605001 chr2L_4605001 RAL-508 111 chr2L 4661825 4661850 chr2L 4669425 4669449 opus 9 7599 3.0 7.0 5.0 1.5 7624 chr2L 4661825 intergenic not near genes chr2L 4665637 intergenic not near genes chr2L 4669449 intergenic not near genes chr2L_9_4665001 chr2L_4665001 RAL-508 112 chr2L 4676847 4676859 chr2L 4676945 4676958 4 98 9.0 7.0 8.0 0.4 111 chr2L 4676847 intergenic not near genes chr2L 4676902 intergenic not near genes chr2L 4676958 intergenic not near genes chr2L_4_4675001 chr2L_4675001 RAL-508 113 chr2L 4676860 4676887 chr2L 4676944 4676986 10 95 4.0 7.0 5.5 1.5 126 chr2L 4676860 intergenic not near genes chr2L 4676923 intergenic not near genes chr2L 4676986 intergenic not near genes chr2L_10_4675001 chr2L_4675001 RAL-508 114 chr2L 4748672 4748722 chr2L 4748771 4748820 17 97 4.0 5.0 4.5 3.1 148 chr2L 4748672 intron CG15630 - chr2L 4748746 intron CG15630 - chr2L 4748820 intron CG15630 - chr2L_17_4745001 chr2L_4745001 RAL-508 115 chr2L 4793289 4793317 chr2L 4793604 4793632 7 314 4.5 1.5 3.0 1.8 343 chr2L 4793289 intron CG15630 - chr2L 4793460 intron CG15630 - chr2L 4793632 intron CG15630 - chr2L_7_4790001 chr2L_4790001 RAL-508 116 chr2L 4819497 4819518 chr2L 4819640 4819661 9 142 2.5 4.0 3.2 2.1 164 chr2L 4819497 intergenic not near genes chr2L 4819579 intergenic not near genes chr2L 4819661 intergenic not near genes chr2L_9_4815001 chr2L_4815001 RAL-508 117 chr2L 4858470 4858478 chr2L 4858576 4858586 4 108 3.5 0.0 1.8 1.4 116 chr2L 4858470 intron pog + chr2L 4858528 intron pog + chr2L 4858586 intron pog + chr2L_4_4855001 chr2L_4855001 RAL-508 118 chr2L 4859217 4859264 chr2L 4859734 4859752 12 513 2.0 2.0 2.0 4.0 535 chr2L 4859217 intron pog + chr2L 4859484 intron pog + chr2L 4859752 intron pog + chr2L_12_4855001 chr2L_4855001 RAL-508 119 chr2L 4918147 4918193 chr2L 4923240 4923324 jockey 5 5101 5.0 0.0 2.5 1.4 5177 chr2L 4918147 intron hoe1 - chr2L 4920736 intron hoe1 - chr2L 4923324 intron hoe1 - chr2L_5_4920001 chr2L_4920001 RAL-508 120 chr2L 4923248 4923254 chr2L 4923359 4923365 5 111 0.0 2.0 1.0 2.5 117 chr2L 4923248 intron hoe1 - chr2L 4923306 intron hoe1 - chr2L 4923365 intron hoe1 - chr2L_5_4920001 chr2L_4920001 RAL-508 121 chr2L 4953499 4953531 chr2L 4953760 4953773 pogo 9 258 3.0 2.5 2.8 2.4 274 chr2L 4953499 intergenic Jon25Bii - chr2L 4953636 intergenic Jon25Bii - chr2L 4953773 intergenic not near genes chr2L_9_4950001 chr2L_4950001 RAL-508 122 chr2L 5025115 5025163 chr2L 5025211 5025259 6 96 5.0 0.0 2.5 1.7 144 chr2L 5025115 intron vkg - chr2L 5025187 intron vkg - chr2L 5025259 intron vkg - chr2L_6_5025001 chr2L_5025001 RAL-508 123 chr2L 5092395 5092434 chr2L 5092502 5092541 7 107 2.5 2.5 2.5 2.0 146 chr2L 5092395 intron pgant5 - chr2L 5092468 intron pgant5 - chr2L 5092541 intron pgant5 - chr2L_7_5090001 chr2L_5090001 RAL-508 124 chr2L 5117282 5117325 chr2L 5117384 5117427 10 101 2.5 8.5 5.5 1.5 145 chr2L 5117282 intron Msp300 + chr2L 5117354 intron Msp300 + chr2L 5117427 intron Msp300 + chr2L_10_5115001 chr2L_5115001 RAL-508 125 chr2L 5120960 5121000 chr2L 5121072 5121114 11 113 4.5 3.5 4.0 2.2 154 chr2L 5120960 intron Msp300 + chr2L 5121037 intron Msp300 + chr2L 5121114 intron Msp300 + chr2L_11_5120001 chr2L_5120001 RAL-508 126 chr2L 5242936 5242937 chr2L 16217660 16217660 4 10974724 20.0 32.0 26.0 0.1 10974724 chr2L 5242936 intron tkv - chr2L 10730298 3` UTR,5` UTR CG6443 +,CG17118 + chr2L 16217660 intergenic not near genes chr2L_4_10730001 chr2L_10730001 RAL-508 127 chr2L 5263722 5263735 chr2L 5263824 5263837 5 101 1.5 9.0 5.2 0.8 115 chr2L 5263722 intron tkv - chr2L 5263780 intron tkv - chr2L 5263837 intron tkv - chr2L_5_5260001 chr2L_5260001 RAL-508 128 chr2L 5342752 5342796 chr2L 5345152 5345196 Doc 15 2396 2.5 5.0 3.8 3.1 2444 chr2L 5342752 intergenic not near genes chr2L 5343974 intergenic not near genes chr2L 5345196 intergenic not near genes chr2L_15_5340001 chr2L_5340001 RAL-508 129 chr2L 5378413 5378452 chr2L 5378511 5378550 7 99 1.5 0.0 0.8 3.9 137 chr2L 5378413 intergenic not near genes chr2L 5378482 intergenic not near genes chr2L 5378550 intergenic not near genes chr2L_7_5375001 chr2L_5375001 RAL-508 130 chr2L 5410021 5410044 chr2L 5410137 5410160 4 112 2.5 4.5 3.5 0.9 139 chr2L 5410021 intron H15 + chr2L 5410090 intron H15 + chr2L 5410160 intron H15 + chr2L_4_5410001 chr2L_5410001 RAL-508 131 chr2L 5468683 5468713 chr2L 5468783 5468806 7 97 2.0 4.0 3.0 1.8 123 chr2L 5468683 intergenic not near genes chr2L 5468744 intergenic not near genes chr2L 5468806 intergenic not near genes chr2L_7_5465001 chr2L_5465001 RAL-508 132 chr2L 5666276 5666321 chr2L 5666383 5666430 6 107 3.0 3.5 3.2 1.4 154 chr2L 5666276 intron Hsp60C + chr2L 5666353 intron Hsp60C + chr2L 5666430 intron Hsp60C + chr2L_6_5665001 chr2L_5665001 RAL-508 133 chr2L 5695842 5695883 chr2L 5695953 5695995 10 107 4.0 4.0 4.0 2.0 153 chr2L 5695842 intergenic not near genes chr2L 5695918 intergenic not near genes chr2L 5695995 intergenic not near genes chr2L_10_5695001 chr2L_5695001 RAL-508 134 chr2L 5720244 5720294 chr2L 5720347 5720385 28 101 3.5 5.0 4.2 5.4 141 chr2L 5720244 intron CG11149 - chr2L 5720314 intron CG11149 - chr2L 5720385 intron CG11149 - chr2L_28_5720001 chr2L_5720001 RAL-508 135 chr2L 5790013 5790052 chr2L 5790112 5790151 5 98 2.5 5.5 4.0 1.0 138 chr2L 5790013 intron CG9171 - chr2L 5790082 intron CG9171 - chr2L 5790151 intron CG9171 - chr2L_5_5790001 chr2L_5790001 RAL-508 136 chr2L 5796886 5796932 chr2L 5796982 5797029 11 96 2.0 2.0 2.0 3.7 143 chr2L 5796886 intron CG9171 - chr2L 5796958 intron CG9171 - chr2L 5797029 intron CG9171 - chr2L_11_5795001 chr2L_5795001 RAL-508 137 chr2L 5819657 5819707 chr2L 5819761 5819811 13 104 3.0 3.5 3.2 3.1 154 chr2L 5819657 intergenic not near genes chr2L 5819734 intergenic not near genes chr2L 5819811 intergenic not near genes chr2L_13_5815001 chr2L_5815001 RAL-508 138 chr2L 5820377 5820425 chr2L 5820553 5820597 17 171 1.0 5.5 3.2 4.0 220 chr2L 5820377 intergenic not near genes chr2L 5820487 intergenic not near genes chr2L 5820597 intergenic not near genes chr2L_17_5820001 chr2L_5820001 RAL-508 139 chr2L 5827707 5827739 chr2L 5836734 5836767 roo 11 9026 5.0 2.5 3.8 2.3 9060 chr2L 5827707 intron TrissinR + chr2L 5832237 intron TrissinR + chr2L 5836767 intron TrissinR + chr2L_11_5830001 chr2L_5830001 RAL-508 140 chr2L 5883166 5883170 chr2L 5883221 5883270 4 88 0.5 3.5 2.0 1.3 104 chr2L 5883166 intergenic not near genes chr2L 5883218 intergenic not near genes chr2L 5883270 intergenic CG44574 + chr2L_4_5880001 chr2L_5880001 RAL-508 141 chr2L 5904440 5904473 chr2L 5904540 5904573 8 99 4.5 1.5 3.0 2.0 133 chr2L 5904440 exon CG9021 - chr2L 5904506 intron CG9021 - chr2L 5904573 intron CG9021 - chr2L_8_5900001 chr2L_5900001 RAL-508 142 chr2L 5942008 5942055 chr2L 5942120 5942129 13 105 3.5 1.0 2.2 4.1 121 chr2L 5942008 5` UTR CR45289 + chr2L 5942068 5` UTR CR45289 + chr2L 5942129 5` UTR CR45289 + chr2L_13_5940001 chr2L_5940001 RAL-508 143 chr2L 5944563 5944585 chr2L 5948985 5949009 7 4421 14.5 21.5 18.0 0.4 4446 chr2L 5944563 intron Gpdh + chr2L 5946786 intron Gpdh + chr2L 5949009 intergenic Gpdh +,CG9044 + chr2L_7_5945001 chr2L_5945001 RAL-508 144 chr2L 5989012 5989057 chr2L 5989108 5989152 10 95 4.5 0.5 2.5 2.9 140 chr2L 5989012 intergenic ifc +,lid - chr2L 5989082 intergenic ifc +,lid - chr2L 5989152 intergenic lid -,ifc + chr2L_10_5985001 chr2L_5985001 RAL-508 145 chr2L 5993308 5993362 chr2L 5993419 5993456 18 110 3.0 1.5 2.2 5.6 148 chr2L 5993308 exon lid - chr2L 5993382 intron lid - chr2L 5993456 intron lid - chr2L_18_5990001 chr2L_5990001 RAL-508 146 chr2L 6050423 6050468 chr2L 6050546 6050592 6 124 3.0 2.5 2.8 1.6 169 chr2L 6050423 3` UTR CG12393 + chr2L 6050508 intergenic CG12393 +,CG9135 + chr2L 6050592 intergenic CG12393 +,CG9135 + chr2L_6_6050001 chr2L_6050001 RAL-508 147 chr2L 6079944 6079992 chr2L 6080062 6080113 20 119 5.5 3.5 4.5 3.6 169 chr2L 6079944 5` UTR CR44773 + chr2L 6080028 5` UTR CR44773 + chr2L 6080113 5` UTR CR44773 + chr2L_20_6080001 chr2L_6080001 RAL-508 148 chr2L 6130750 6130764 chr2L 6130855 6130869 4 105 4.0 0.5 2.2 1.2 119 chr2L 6130750 intergenic CG42730 -,tectonic -,CG9222 + chr2L 6130810 intergenic CG42730 -,tectonic -,CG9222 + chr2L 6130869 intergenic CG9222 +,CG42730 -,tectonic - chr2L_4_6130001 chr2L_6130001 RAL-508 149 chr2L 6136537 6136582 chr2L 6136654 6136699 5 117 2.5 7.0 4.8 0.9 162 chr2L 6136537 intergenic not near genes chr2L 6136618 intergenic not near genes chr2L 6136699 intergenic not near genes chr2L_5_6135001 chr2L_6135001 RAL-508 150 chr2L 6185428 6185469 chr2L 6185518 6185567 10 96 3.0 8.0 5.5 1.5 139 chr2L 6185428 intron CG34380 + chr2L 6185498 intron CG34380 + chr2L 6185567 intron CG34380 + chr2L_10_6185001 chr2L_6185001 RAL-508 151 chr2L 6253599 6253635 chr2L 6253695 6253729 6 96 6.5 1.5 4.0 1.2 130 chr2L 6253599 intron Ddr + chr2L 6253664 intron Ddr + chr2L 6253729 intron Ddr + chr2L_6_6250001 chr2L_6250001 RAL-508 152 chr2L 6279627 6279639 chr2L 6279726 6279732 INE-1 4 97 4.5 1.0 2.8 1.1 105 chr2L 6279627 intron Ddr + chr2L 6279680 intron Ddr + chr2L 6279732 intron Ddr + chr2L_4_6275001 chr2L_6275001 RAL-508 153 chr2L 6286374 6286422 chr2L 6286489 6286536 14 113 3.5 3.5 3.5 3.1 162 chr2L 6286374 intron Ddr + chr2L 6286455 intron Ddr + chr2L 6286536 intron Ddr + chr2L_14_6285001 chr2L_6285001 RAL-508 154 chr2L 6363129 6363182 chr2L 6366071 6366091 Burdock 11 2937 3.0 2.0 2.5 3.1 2962 chr2L 6363129 intergenic not near genes chr2L 6364610 intergenic not near genes chr2L 6366091 intergenic not near genes chr2L_11_6360001 chr2L_6360001 RAL-508 155 chr2L 6426834 6426888 chr2L 6445113 6445132 roo 18 18275 6.5 6.0 6.2 2.5 18298 chr2L 6426834 3` UTR CG9527 - chr2L 6435983 intron CG9527 - chr2L 6445132 exon CG9527 - chr2L_18_6435001 chr2L_6435001 RAL-508 156 chr2L 6453587 6453629 chr2L 6453686 6453729 6 100 3.0 0.5 1.8 2.1 142 chr2L 6453587 intron retm - chr2L 6453658 intron retm - chr2L 6453729 intron retm - chr2L_6_6450001 chr2L_6450001 RAL-508 157 chr2L 6516031 6516067 chr2L 6516133 6516158 12 94 5.0 3.5 4.2 2.3 127 chr2L 6516031 intron CG31637 + chr2L 6516094 intron CG31637 + chr2L 6516158 intron CG31637 + chr2L_12_6515001 chr2L_6515001 RAL-508 158 chr2L 6527234 6527240 chr2L 6527333 6527339 4 99 2.0 1.5 1.8 1.4 105 chr2L 6527234 intergenic eya -,CG31637 + chr2L 6527286 intergenic eya -,CG31637 + chr2L 6527339 intergenic eya -,CG31637 + chr2L_4_6525001 chr2L_6525001 RAL-508 159 chr2L 6544356 6544381 chr2L 6544468 6544493 6 112 8.0 5.5 6.8 0.8 137 chr2L 6544356 intron eya - chr2L 6544424 intron eya - chr2L 6544493 intron eya - chr2L_6_6540001 chr2L_6540001 RAL-508 160 chr2L 6626878 6626915 chr2L 6626969 6627005 14 99 4.0 1.0 2.5 4.0 127 chr2L 6626878 intron Oatp26F - chr2L 6626942 intron Oatp26F - chr2L 6627005 intron Oatp26F - chr2L_14_6625001 chr2L_6625001 RAL-508 161 chr2L 6655507 6655542 chr2L 6655889 6655914 13 372 31.5 19.5 25.5 0.5 407 chr2L 6655507 exon CG31633 - chr2L 6655710 exon CG31633 - chr2L 6655914 exon CG31633 - chr2L_13_6655001 chr2L_6655001 RAL-508 162 chr2L 6746078 6746112 chr2L 6746173 6746208 12 94 4.5 6.0 5.2 1.9 130 chr2L 6746078 intron CG11221 + chr2L 6746143 intron CG11221 + chr2L 6746208 intron CG11221 + chr2L_12_6745001 chr2L_6745001 RAL-508 163 chr2L 6772576 6772597 chr2L 6772667 6772697 4 94 8.0 2.0 5.0 0.7 121 chr2L 6772576 5` UTR CG11321 - chr2L 6772636 5` UTR CG11321 - chr2L 6772697 5` UTR CG11321 - chr2L_4_6770001 chr2L_6770001 RAL-508 164 chr2L 6799523 6799572 chr2L 6799631 6799679 8 107 2.5 2.5 2.5 2.3 156 chr2L 6799523 5` UTR CR43610 + chr2L 6799601 intergenic CR43610 +,CG17376 - chr2L 6799679 intergenic CR43610 +,CG17376 - chr2L_8_6795001 chr2L_6795001 RAL-508 165 chr2L 6850359 6850402 chr2L 6850462 6850505 14 102 6.5 4.0 5.2 2.3 146 chr2L 6850359 intergenic not near genes chr2L 6850432 intergenic not near genes chr2L 6850505 intergenic not near genes chr2L_14_6850001 chr2L_6850001 RAL-508 166 chr2L 6876773 6876810 chr2L 6882972 6883012 diver 9 6200 5.5 5.5 5.5 1.4 6239 chr2L 6876773 intron Nlg2 + chr2L 6879892 intron Nlg2 + chr2L 6883012 intron Nlg2 + chr2L_9_6875001 chr2L_6875001 RAL-508 167 chr2L 6887478 6887525 chr2L 6887648 6887697 4 170 2.5 0.0 1.2 1.8 219 chr2L 6887478 intron Nlg2 + chr2L 6887588 intron Nlg2 + chr2L 6887697 intron Nlg2 + chr2L_4_6885001 chr2L_6885001 RAL-508 168 chr2L 6891443 6891472 chr2L 6891561 6891590 10 118 2.0 8.0 5.0 1.7 147 chr2L 6891443 intron Nlg2 + chr2L 6891516 intron Nlg2 + chr2L 6891590 intron Nlg2 + chr2L_10_6890001 chr2L_6890001 RAL-508 169 chr2L 6988713 6988760 chr2L 6988813 6988853 20 97 3.5 4.5 4.0 4.0 140 chr2L 6988713 intron uif - chr2L 6988783 intron uif - chr2L 6988853 intron uif - chr2L_20_6985001 chr2L_6985001 RAL-508 170 chr2L 7114976 7115030 chr2L 7115129 7115179 8 149 0.0 2.5 1.2 3.6 203 chr2L 7114976 intron Pvf3 - chr2L 7115078 intron Pvf3 - chr2L 7115179 intron Pvf3 - chr2L_8_7115001 chr2L_7115001 RAL-508 171 chr2L 7126747 7126873 chr2L 7126846 7126972 4 100 0.0 0.0 0.0 4.0 225 chr2L 7126747 intron Pvf3 - chr2L 7126860 intron Pvf3 - chr2L 7126972 intron Pvf3 - chr2L_4_7125001 chr2L_7125001 RAL-508 172 chr2L 7244707 7244754 chr2L 7244852 7244881 10 143 3.5 5.5 4.5 1.8 174 chr2L 7244707 intron Ndae1 - chr2L 7244794 intron Ndae1 - chr2L 7244881 intron Ndae1 - chr2L_10_7240001 chr2L_7240001 RAL-508 173 chr2L 7259374 7259413 chr2L 7259822 7259861 11 448 2.5 5.5 4.0 2.2 487 chr2L 7259374 intron Wnt4 - chr2L 7259618 intron Wnt4 - chr2L 7259861 intron Wnt4 - chr2L_11_7255001 chr2L_7255001 RAL-508 174 chr2L 7301293 7301328 chr2L 7301380 7301431 6 100 5.0 2.0 3.5 1.3 138 chr2L 7301293 intergenic not near genes chr2L 7301362 intergenic not near genes chr2L 7301431 intergenic not near genes chr2L_6_7300001 chr2L_7300001 RAL-508 175 chr2L 7335188 7335232 chr2L 7335304 7335349 5 104 2.5 1.5 2.0 1.7 161 chr2L 7335188 intron Wnt6 + chr2L 7335268 intron Wnt6 + chr2L 7335349 intron Wnt6 + chr2L_5_7335001 chr2L_7335001 RAL-508 176 chr2L 7343305 7343315 chr2L 7350441 7350451 roo 7 7135 10.0 0.0 5.0 1.2 7146 chr2L 7343305 intron Wnt6 + chr2L 7346878 intron Wnt6 + chr2L 7350451 intron Wnt6 + chr2L_7_7345001 chr2L_7345001 RAL-508 177 chr2L 7343317 7343350 chr2L 7350440 7350473 roo 11 7129 5.5 0.0 2.8 2.9 7156 chr2L 7343317 intron Wnt6 + chr2L 7346895 intron Wnt6 + chr2L 7350473 intron Wnt6 + chr2L_11_7345001 chr2L_7345001 RAL-508 178 chr2L 7405760 7405774 chr2L 7405859 7405868 4 98 6.0 0.0 3.0 1.0 108 chr2L 7405760 exon CG5177 + chr2L 7405814 intron CG5177 + chr2L 7405868 intron CG5177 + chr2L_4_7405001 chr2L_7405001 RAL-508 179 chr2L 7465238 7465259 chr2L 7465346 7465357 6 106 1.5 4.5 3.0 1.5 119 chr2L 7465238 intergenic not near genes chr2L 7465298 intergenic not near genes chr2L 7465357 intergenic not near genes chr2L_6_7465001 chr2L_7465001 RAL-508 180 chr2L 7502717 7502764 chr2L 7502813 7502858 20 92 2.0 1.5 1.8 7.1 141 chr2L 7502717 intron RapGAP1 - chr2L 7502788 intron RapGAP1 - chr2L 7502858 intron RapGAP1 - chr2L_20_7500001 chr2L_7500001 RAL-508 181 chr2L 7555200 7555221 chr2L 7555296 7555318 5 95 0.5 4.0 2.2 1.6 118 chr2L 7555200 intron RapGAP1 - chr2L 7555259 intron RapGAP1 - chr2L 7555318 intron RapGAP1 - chr2L_5_7555001 chr2L_7555001 RAL-508 182 chr2L 7555222 7555234 chr2L 7555294 7555330 5 91 0.5 4.0 2.2 1.6 108 chr2L 7555222 intron RapGAP1 - chr2L 7555276 intron RapGAP1 - chr2L 7555330 intron RapGAP1 - chr2L_5_7555001 chr2L_7555001 RAL-508 183 chr2L 7609511 7609743 chr2L 7609626 7609840 7 104 0.0 0.0 0.0 7.0 329 chr2L 7609511 intron CG6739 + chr2L 7609676 intron CG6739 + chr2L 7609840 intron CG6739 + chr2L_7_7605001 chr2L_7605001 RAL-508 184 chr2L 7650480 7650514 chr2L 7650589 7650623 12 109 5.0 3.5 4.2 2.3 143 chr2L 7650480 intron Slob - chr2L 7650552 intron Slob - chr2L 7650623 intron Slob - chr2L_12_7650001 chr2L_7650001 RAL-508 185 chr2L 7766625 7766654 chr2L 7766706 7766749 4 88 5.0 0.5 2.8 1.1 124 chr2L 7766625 intergenic not near genes chr2L 7766687 intergenic not near genes chr2L 7766749 intergenic not near genes chr2L_4_7765001 chr2L_7765001 RAL-508 186 chr2L 7775617 7775662 chr2L 7775729 7775774 6 110 3.0 2.0 2.5 1.7 157 chr2L 7775617 intergenic CG7179 - chr2L 7775696 intergenic CG7179 - chr2L 7775774 intergenic CG7179 - chr2L_6_7775001 chr2L_7775001 RAL-508 187 chr2L 7867554 7867569 chr2L 7867667 7867683 5 113 7.0 2.5 4.8 0.9 129 chr2L 7867554 intron Proc - chr2L 7867618 intron Proc - chr2L 7867683 intron Proc - chr2L_5_7865001 chr2L_7865001 RAL-508 188 chr2L 7867570 7867594 chr2L 7867665 7867707 12 112 5.0 2.5 3.8 2.5 137 chr2L 7867570 intron Proc - chr2L 7867638 intron Proc - chr2L 7867707 intron Proc - chr2L_12_7865001 chr2L_7865001 RAL-508 189 chr2L 7922728 7922772 chr2L 7922828 7922873 15 101 6.0 9.0 7.5 1.8 145 chr2L 7922728 intron Snoo - chr2L 7922800 intron Snoo - chr2L 7922873 intron Snoo - chr2L_15_7920001 chr2L_7920001 RAL-508 190 chr2L 7959025 7959073 chr2L 7960453 7960506 pogo 19 1428 3.5 2.5 3.0 4.8 1481 chr2L 7959025 intron Snoo - chr2L 7959766 intron Snoo - chr2L 7960506 intron Snoo - chr2L_19_7955001 chr2L_7955001 RAL-508 191 chr2L 7977059 7977102 chr2L 7984053 7984095 297 10 6989 4.0 2.5 3.2 2.4 7036 chr2L 7977059 intron Snoo - chr2L 7980577 intron Snoo - chr2L 7984095 intron,5` UTR Snoo -,CG7231 + chr2L_10_7980001 chr2L_7980001 RAL-508 192 chr2L 7997025 7997057 chr2L 7997145 7997175 5 119 0.0 3.0 1.5 2.0 150 chr2L 7997025 intron CG7227 - chr2L 7997100 intron CG7227 - chr2L 7997175 intron CG7227 - chr2L_5_7995001 chr2L_7995001 RAL-508 193 chr2L 8018817 8018836 chr2L 8023615 8023639 Doc 7 4803 0.0 6.5 3.2 1.7 4822 chr2L 8018817 intron Tg + chr2L 8021228 intron Tg + chr2L 8023639 intron Tg + chr2L_7_8020001 chr2L_8020001 RAL-508 194 chr2L 8044075 8044125 chr2L 8044174 8044195 13 92 3.0 3.5 3.2 3.1 120 chr2L 8044075 intron CG7466 + chr2L 8044135 intron CG7466 + chr2L 8044195 intron CG7466 + chr2L_13_8040001 chr2L_8040001 RAL-508 195 chr2L 8164563 8164616 chr2L 8164665 8164716 16 101 5.0 5.0 5.0 2.7 153 chr2L 8164563 intron Piezo + chr2L 8164640 intron Piezo + chr2L 8164716 intron Piezo + chr2L_16_8160001 chr2L_8160001 RAL-508 196 chr2L 8231949 8232021 chr2L 8232078 8232119 6 118 0.0 0.0 0.0 6.0 170 chr2L 8231949 intron Pvr - chr2L 8232034 intron Pvr - chr2L 8232119 intron Pvr - chr2L_6_8230001 chr2L_8230001 RAL-508 197 chr2L 8244717 8244748 chr2L 8244859 8244890 9 142 0.0 3.5 1.8 3.2 173 chr2L 8244717 intron CG8086 - chr2L 8244804 intron CG8086 - chr2L 8244890 intron CG8086 - chr2L_9_8240001 chr2L_8240001 RAL-508 198 chr2L 8284999 8285037 chr2L 8285095 8285133 8 96 3.0 2.5 2.8 2.1 134 chr2L 8284999 intron Btk29A - chr2L 8285066 intron Btk29A - chr2L 8285133 intron Btk29A - chr2L_8_8285001 chr2L_8285001 RAL-508 199 chr2L 8287304 8287344 chr2L 8287554 8287585 12 248 2.0 3.0 2.5 3.4 281 chr2L 8287304 intron Btk29A - chr2L 8287444 intron Btk29A - chr2L 8287585 intron Btk29A - chr2L_12_8285001 chr2L_8285001 RAL-508 200 chr2L 8330260 8330314 chr2L 8330365 8330419 7 105 2.5 2.0 2.2 2.2 159 chr2L 8330260 intron CG14275 + chr2L 8330340 intron CG14275 + chr2L 8330419 intron CG14275 + chr2L_7_8330001 chr2L_8330001 RAL-508 201 chr2L 8334315 8334355 chr2L 8334422 8334446 9 104 6.5 2.5 4.5 1.6 131 chr2L 8334315 intergenic not near genes chr2L 8334380 intergenic not near genes chr2L 8334446 intergenic not near genes chr2L_9_8330001 chr2L_8330001 RAL-508 202 chr2L 8336928 8336961 chr2L 8337027 8337046 8 97 0.0 3.5 1.8 2.9 118 chr2L 8336928 intergenic not near genes chr2L 8336987 intergenic not near genes chr2L 8337046 intergenic not near genes chr2L_8_8335001 chr2L_8335001 RAL-508 203 chr2L 8351546 8351578 chr2L 8351643 8351675 4 96 0.0 1.5 0.8 2.2 129 chr2L 8351546 intergenic CG7778 + chr2L 8351610 intergenic CG7778 + chr2L 8351675 intergenic not near genes chr2L_4_8350001 chr2L_8350001 RAL-508 204 chr2L 8392027 8392080 chr2L 8393278 8393329 8 1249 4.5 3.5 4.0 1.6 1302 chr2L 8392027 exon CG42820 - chr2L 8392678 exon Acp29AB - chr2L 8393329 intergenic Acp29AB -,lectin-29Ca - chr2L_8_8390001 chr2L_8390001 RAL-508 205 chr2L 8452407 8452445 chr2L 8461597 8461636 roo 13 9191 3.0 7.5 5.2 2.1 9229 chr2L 8452407 intron fu12 - chr2L 8457022 intron fu12 - chr2L 8461636 intron fu12 - chr2L_13_8455001 chr2L_8455001 RAL-508 206 chr2L 8538149 8538194 chr2L 8538245 8538300 4 98 4.0 0.0 2.0 1.3 151 chr2L 8538149 intron CG17834 + chr2L 8538224 intron CG17834 + chr2L 8538300 intron CG17834 + chr2L_4_8535001 chr2L_8535001 RAL-508 207 chr2L 8594448 8594486 chr2L 8601522 8601560 297 7 7073 5.0 0.0 2.5 2.0 7112 chr2L 8594448 intron,3` UTR Sema-1a +,CR43855 - chr2L 8598004 intron Sema-1a + chr2L 8601560 intron Sema-1a + chr2L_7_8595001 chr2L_8595001 RAL-508 208 chr2L 8612837 8612869 chr2L 8612934 8612966 12 97 4.0 8.0 6.0 1.7 129 chr2L 8612837 intron Sema-1a + chr2L 8612902 intron Sema-1a + chr2L 8612966 intron Sema-1a + chr2L_12_8610001 chr2L_8610001 RAL-508 209 chr2L 8723095 8723105 chr2L 8731492 8731502 Tirant 5 8397 6.0 4.5 5.2 0.8 8407 chr2L 8723095 intron raw - chr2L 8727298 intron raw - chr2L 8731502 intron raw - chr2L_5_8725001 chr2L_8725001 RAL-508 210 chr2L 8723106 8723136 chr2L 8731491 8731533 Tirant 12 8395 4.5 4.0 4.2 2.3 8427 chr2L 8723106 intron raw - chr2L 8727320 intron raw - chr2L 8731533 intron raw - chr2L_12_8725001 chr2L_8725001 RAL-508 211 chr2L 8759975 8760008 chr2L 8760134 8760186 4 165 1.5 0.0 0.8 2.2 211 chr2L 8759975 intergenic not near genes chr2L 8760080 intergenic not near genes chr2L 8760186 intergenic not near genes chr2L_4_8760001 chr2L_8760001 RAL-508 212 chr2L 8891855 8891897 chr2L 8891953 8891996 4 98 2.5 0.0 1.2 1.8 141 chr2L 8891855 3` UTR CG42713 + chr2L 8891926 3` UTR CG42713 + chr2L 8891996 3` UTR CG42713 + chr2L_4_8890001 chr2L_8890001 RAL-508 213 chr2L 8900386 8900414 chr2L 8900459 8900512 12 88 4.5 2.0 3.2 2.9 126 chr2L 8900386 intron CG34398 + chr2L 8900449 intron CG34398 + chr2L 8900512 intron CG34398 + chr2L_12_8900001 chr2L_8900001 RAL-508 214 chr2L 8938385 8938429 chr2L 8938486 8938530 15 99 2.5 3.5 3.0 3.8 145 chr2L 8938385 intron Tsp29Fb + chr2L 8938458 intron Tsp29Fb + chr2L 8938530 intron Tsp29Fb + chr2L_15_8935001 chr2L_8935001 RAL-508 215 chr2L 9000262 9000300 chr2L 9007792 9007829 roo 18 7527 7.0 6.0 6.5 2.4 7567 chr2L 9000262 intergenic Try29F + chr2L 9004046 intergenic not near genes chr2L 9007829 intergenic not near genes chr2L_18_9000001 chr2L_9000001 RAL-508 216 chr2L 9025809 9025838 chr2L 9025911 9025919 11 101 6.5 4.5 5.5 1.7 110 chr2L 9025809 intron,3` UTR CG9582 -,CR44352 - chr2L 9025864 intron,3` UTR CG9582 -,CR44352 - chr2L 9025919 intron,3` UTR CG9582 -,CR44352 - chr2L_11_9025001 chr2L_9025001 RAL-508 217 chr2L 9068157 9068176 chr2L 9068254 9068272 5 97 3.5 2.0 2.8 1.3 115 chr2L 9068157 intron CG31708 - chr2L 9068214 intron CG31708 - chr2L 9068272 intron CG31708 - chr2L_5_9065001 chr2L_9065001 RAL-508 218 chr2L 9080713 9080728 chr2L 9080801 9080846 6 101 2.5 3.0 2.8 1.6 133 chr2L 9080713 intergenic not near genes chr2L 9080780 intergenic not near genes chr2L 9080846 intergenic not near genes chr2L_6_9080001 chr2L_9080001 RAL-508 219 chr2L 9084337 9084340 chr2L 16217660 16217660 11 7133321 16.0 32.0 24.0 0.4 7133323 chr2L 9084337 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_11_12650001 chr2L_12650001 RAL-508 220 chr2L 9113790 9113803 chr2L 9113920 9113933 5 130 7.0 0.5 3.8 1.0 143 chr2L 9113790 intergenic not near genes chr2L 9113862 intergenic not near genes chr2L 9113933 intergenic not near genes chr2L_5_9110001 chr2L_9110001 RAL-508 221 chr2L 9156532 9156583 chr2L 9156630 9156678 15 95 4.0 5.5 4.8 2.6 146 chr2L 9156532 exon CG32982 + chr2L 9156605 intron CG32982 + chr2L 9156678 intron CG32982 + chr2L_15_9155001 chr2L_9155001 RAL-508 222 chr2L 9168445 9168496 chr2L 9168569 9168585 12 118 2.0 3.5 2.8 3.2 140 chr2L 9168445 intron tai + chr2L 9168515 intron tai + chr2L 9168585 intron tai + chr2L_12_9165001 chr2L_9165001 RAL-508 223 chr2L 9297357 9297405 chr2L 9297454 9297501 22 96 4.0 4.5 4.2 4.2 144 chr2L 9297357 3` UTR Ggamma30A + chr2L 9297429 3` UTR Ggamma30A + chr2L 9297501 3` UTR Ggamma30A + chr2L_22_9295001 chr2L_9295001 RAL-508 224 chr2L 9303496 9303544 chr2L 9303596 9303621 10 97 3.5 6.5 5.0 1.7 125 chr2L 9303496 intergenic not near genes chr2L 9303558 intergenic not near genes chr2L 9303621 intergenic not near genes chr2L_10_9300001 chr2L_9300001 RAL-508 225 chr2L 9308432 9308450 chr2L 9308496 9308538 6 78 1.0 5.5 3.2 1.4 106 chr2L 9308432 intergenic not near genes chr2L 9308485 intergenic not near genes chr2L 9308538 intergenic not near genes chr2L_6_9305001 chr2L_9305001 RAL-508 226 chr2L 9317405 9317424 chr2L 9317543 9317562 6 137 6.5 0.0 3.2 1.4 157 chr2L 9317405 intergenic not near genes chr2L 9317484 intergenic not near genes chr2L 9317562 intergenic not near genes chr2L_6_9315001 chr2L_9315001 RAL-508 227 chr2L 9334994 9335032 chr2L 9335091 9335130 10 99 3.0 3.0 3.0 2.5 136 chr2L 9334994 intron Eaat1 + chr2L 9335062 intron Eaat1 + chr2L 9335130 intron Eaat1 + chr2L_10_9335001 chr2L_9335001 RAL-508 228 chr2L 9380227 9380250 chr2L 9380342 9380362 7 114 4.5 1.0 2.8 1.8 135 chr2L 9380227 exon Shawl - chr2L 9380294 intron Shawl - chr2L 9380362 intron Shawl - chr2L_7_9380001 chr2L_9380001 RAL-508 229 chr2L 9393487 9393523 chr2L 9396466 9396510 jockey 20 2985 5.0 2.5 3.8 4.2 3023 chr2L 9393487 intron Shawl - chr2L 9394998 intron Shawl - chr2L 9396510 intron Shawl - chr2L_20_9390001 chr2L_9390001 RAL-508 230 chr2L 9407889 9407902 chr2L 9407991 9408004 4 102 1.5 7.0 4.2 0.8 115 chr2L 9407889 intron Shawl - chr2L 9407946 intron Shawl - chr2L 9408004 intron Shawl - chr2L_4_9405001 chr2L_9405001 RAL-508 231 chr2L 9412632 9412681 chr2L 9412796 9412845 6 164 1.5 2.5 2.0 2.0 213 chr2L 9412632 intron Shawl - chr2L 9412738 intron Shawl - chr2L 9412845 intron Shawl - chr2L_6_9410001 chr2L_9410001 RAL-508 232 chr2L 9464824 9464858 chr2L 9464936 9464970 7 111 2.5 3.0 2.8 1.8 146 chr2L 9464824 intergenic not near genes chr2L 9464897 intergenic not near genes chr2L 9464970 intergenic not near genes chr2L_7_9460001 chr2L_9460001 RAL-508 233 chr2L 9506346 9506371 chr2L 9506448 9506472 6 101 0.5 2.0 1.2 2.7 126 chr2L 9506346 intron CG33298 + chr2L 9506409 intron CG33298 + chr2L 9506472 intron CG33298 + chr2L_6_9505001 chr2L_9505001 RAL-508 234 chr2L 9619482 9619522 chr2L 9619836 9619874 8 351 2.0 1.0 1.5 3.2 392 chr2L 9619482 intron GlcAT-S + chr2L 9619678 intron GlcAT-S + chr2L 9619874 intron GlcAT-S + chr2L_8_9615001 chr2L_9615001 RAL-508 235 chr2L 9719757 9719783 chr2L 9719859 9719881 5 100 0.0 0.0 0.0 5.0 124 chr2L 9719757 intron Nckx30C - chr2L 9719819 intron Nckx30C - chr2L 9719881 intron Nckx30C - chr2L_5_9715001 chr2L_9715001 RAL-508 236 chr2L 9730958 9731005 chr2L 9731061 9731108 13 101 3.0 4.5 3.8 2.7 150 chr2L 9730958 intron Nckx30C - chr2L 9731033 intron Nckx30C - chr2L 9731108 intron Nckx30C - chr2L_13_9730001 chr2L_9730001 RAL-508 237 chr2L 9871514 9871525 chr2L 9871618 9871629 7 104 3.0 2.5 2.8 1.8 115 chr2L 9871514 intron nAChRalpha6 - chr2L 9871572 intron nAChRalpha6 - chr2L 9871629 intron nAChRalpha6 - chr2L_7_9870001 chr2L_9870001 RAL-508 238 chr2L 9973708 9973759 chr2L 9980846 9980864 HMS-Beagle 21 7135 4.0 5.5 4.8 3.6 7156 chr2L 9973708 intergenic not near genes chr2L 9977286 intergenic not near genes chr2L 9980864 intergenic not near genes chr2L_21_9975001 chr2L_9975001 RAL-508 239 chr2L 10051706 10051749 chr2L 10051811 10051852 12 97 4.0 5.5 4.8 2.1 146 chr2L 10051706 5` UTR CR44874 + chr2L 10051779 5` UTR CR44874 + chr2L 10051852 5` UTR CR44874 + chr2L_12_10050001 chr2L_10050001 RAL-508 240 chr2L 10105269 10105310 chr2L 10105365 10105406 15 92 2.0 6.5 4.2 2.9 137 chr2L 10105269 intron,intron CG44153 -,CG34109 + chr2L 10105338 intron,intron CG44153 -,CG34109 + chr2L 10105406 intron,intron CG44153 -,CG34109 + chr2L_15_10105001 chr2L_10105001 RAL-508 241 chr2L 10133030 10133085 chr2L 10133131 10133180 12 88 2.5 5.5 4.0 2.4 150 chr2L 10133030 intron CG44153 - chr2L 10133105 intron CG44153 - chr2L 10133180 intron CG44153 - chr2L_12_10130001 chr2L_10130001 RAL-508 242 chr2L 10153212 10153232 chr2L 10153287 10153331 10 87 1.5 1.0 1.2 4.5 119 chr2L 10153212 intron,exon CG44153 -,CG4839 + chr2L 10153272 intron,intron CG44153 -,CG4839 + chr2L 10153331 intron,exon CG44153 -,CG4839 + chr2L_10_10150001 chr2L_10150001 RAL-508 243 chr2L 10156305 10156338 chr2L 10163795 10163802 blood 6 7479 7.0 5.0 6.0 0.9 7497 chr2L 10156305 intron,3` UTR CG44153 -,CG4839 + chr2L 10160054 intron CG44153 - chr2L 10163802 intron CG44153 - chr2L_6_10160001 chr2L_10160001 RAL-508 244 chr2L 10176023 10176024 chr2L 16071771 16071771 9 5895748 22.5 20.5 21.5 0.4 5895748 chr2L 10176023 intron CG44153 - chr2L 13123897 intergenic not near genes chr2L 16071771 intron beat-Ia + chr2L_9_13120001 chr2L_13120001 RAL-508 245 chr2L 10180571 10180600 chr2L 10180677 10180703 8 106 2.0 0.5 1.2 3.6 132 chr2L 10180571 intergenic CG44153 - chr2L 10180637 intergenic CG44153 - chr2L 10180703 intergenic CG44153 - chr2L_8_10180001 chr2L_10180001 RAL-508 246 chr2L 10209829 10209854 chr2L 10209926 10209949 6 97 3.5 0.0 1.8 2.1 120 chr2L 10209829 intergenic CG5727 -,CR44845 +,CG5731 - chr2L 10209889 3` UTR CG5727 - chr2L 10209949 3` UTR CG5727 - chr2L_6_10205001 chr2L_10205001 RAL-508 247 chr2L 10294659 10294683 chr2L 10294765 10294789 4 106 2.0 1.5 1.8 1.4 130 chr2L 10294659 intron Hand - chr2L 10294724 intron Hand - chr2L 10294789 intron Hand - chr2L_4_10290001 chr2L_10290001 RAL-508 248 chr2L 10348366 10348414 chr2L 10348469 10348507 10 102 1.5 0.0 0.8 5.6 141 chr2L 10348366 intron CG34367 - chr2L 10348436 intron CG34367 - chr2L 10348507 intron CG34367 - chr2L_10_10345001 chr2L_10345001 RAL-508 249 chr2L 10474372 10474413 chr2L 10474466 10474501 7 92 2.5 2.0 2.2 2.2 129 chr2L 10474372 intergenic RluA-1 - chr2L 10474436 intergenic RluA-1 - chr2L 10474501 intergenic RluA-1 - chr2L_7_10470001 chr2L_10470001 RAL-508 250 chr2L 10495297 10495461 chr2L 10495394 10495567 15 102 0.0 0.0 0.0 15.0 270 chr2L 10495297 intron Myo31DF - chr2L 10495432 intron Myo31DF - chr2L 10495567 intron Myo31DF - chr2L_15_10495001 chr2L_10495001 RAL-508 251 chr2L 10531605 10531621 chr2L 10531716 10531733 4 112 0.5 2.5 1.5 1.6 128 chr2L 10531605 3` UTR Lip4 + chr2L 10531669 3` UTR Lip4 + chr2L 10531733 3` UTR Lip4 + chr2L_4_10530001 chr2L_10530001 RAL-508 252 chr2L 10563897 10563939 chr2L 10564005 10564052 7 107 4.0 3.0 3.5 1.6 155 chr2L 10563897 intron Trim9 + chr2L 10563974 intron Trim9 + chr2L 10564052 intron Trim9 + chr2L_7_10560001 chr2L_10560001 RAL-508 253 chr2L 10580673 10580713 chr2L 10580767 10580800 7 86 6.5 5.0 5.8 1.0 127 chr2L 10580673 intron Trim9 + chr2L 10580736 intron Trim9 + chr2L 10580800 intron Trim9 + chr2L_7_10580001 chr2L_10580001 RAL-508 254 chr2L 10592837 10592869 chr2L 10600509 10600551 opus 8 7676 0.5 3.0 1.8 2.9 7714 chr2L 10592837 intron Trim9 + chr2L 10596694 intron Trim9 + chr2L 10600551 intron Trim9 + chr2L_8_10595001 chr2L_10595001 RAL-508 255 chr2L 10726998 10727027 chr2L 10727111 10727127 9 114 3.5 6.0 4.8 1.6 129 chr2L 10726998 intron CG6431 + chr2L 10727062 intron CG6431 + chr2L 10727127 intron CG6431 + chr2L_9_10725001 chr2L_10725001 RAL-508 256 chr2L 10746464 10746482 chr2L 10746697 10746715 4 233 1.0 3.5 2.2 1.2 251 chr2L 10746464 intron CG17124 - chr2L 10746590 intron CG17124 - chr2L 10746715 intron CG17124 - chr2L_4_10745001 chr2L_10745001 RAL-508 257 chr2L 10836744 10836773 chr2L 10836842 10836871 4 98 2.5 1.0 1.8 1.4 127 chr2L 10836744 intron Nos - chr2L 10836808 intron Nos - chr2L 10836871 intron Nos - chr2L_4_10835001 chr2L_10835001 RAL-508 258 chr2L 10862847 10862862 chr2L 10864481 10864496 Rt1c 4 1632 11.0 9.5 10.2 0.4 1649 chr2L 10862847 3` UTR CR43807 - chr2L 10863672 intron CR43807 - chr2L 10864496 3` UTR CR43807 - chr2L_4_10860001 chr2L_10860001 RAL-508 259 chr2L 10862864 10862876 chr2L 10864460 10864479 Rt1c 9 1607 7.5 6.0 6.8 1.2 1615 chr2L 10862864 3` UTR CR43807 - chr2L 10863672 intron CR43807 - chr2L 10864479 3` UTR CR43807 - chr2L_9_10860001 chr2L_10860001 RAL-508 260 chr2L 10905584 10905629 chr2L 10905691 10905735 7 107 0.0 1.0 0.5 4.7 151 chr2L 10905584 intergenic not near genes chr2L 10905660 intergenic not near genes chr2L 10905735 intergenic not near genes chr2L_7_10905001 chr2L_10905001 RAL-508 261 chr2L 10912976 10913000 chr2L 10913074 10913099 12 97 10.0 7.5 8.8 1.2 123 chr2L 10912976 intergenic not near genes chr2L 10913038 intergenic not near genes chr2L 10913099 intergenic not near genes chr2L_12_10910001 chr2L_10910001 RAL-508 262 chr2L 10946953 10946974 chr2L 10956165 10956200 roo 5 9227 2.5 3.5 3.0 1.2 9247 chr2L 10946953 intron dpr2 - chr2L 10951576 intron dpr2 - chr2L 10956200 intron dpr2 - chr2L_5_10950001 chr2L_10950001 RAL-508 263 chr2L 11224039 11224091 chr2L 11224170 11224222 13 130 2.5 3.0 2.8 3.4 183 chr2L 11224039 intron ab + chr2L 11224130 intron ab + chr2L 11224222 intron ab + chr2L_13_11220001 chr2L_11220001 RAL-508 264 chr2L 11298804 11298852 chr2L 11298901 11298948 10 97 3.0 2.5 2.8 2.6 144 chr2L 11298804 intergenic not near genes chr2L 11298876 intergenic not near genes chr2L 11298948 intergenic not near genes chr2L_10_11295001 chr2L_11295001 RAL-508 265 chr2L 11303047 11303090 chr2L 11303147 11303191 13 97 5.0 4.5 4.8 2.2 144 chr2L 11303047 intergenic not near genes chr2L 11303119 intergenic not near genes chr2L 11303191 intergenic not near genes chr2L_13_11300001 chr2L_11300001 RAL-508 266 chr2L 11303659 11303703 chr2L 11303751 11303805 25 88 2.5 2.0 2.2 7.8 146 chr2L 11303659 intergenic not near genes chr2L 11303732 intergenic not near genes chr2L 11303805 intergenic not near genes chr2L_25_11300001 chr2L_11300001 RAL-508 267 chr2L 11315250 11315266 chr2L 11317674 11317676 G2 4 2420 5.0 3.0 4.0 0.8 2426 chr2L 11315250 intergenic not near genes chr2L 11316463 intergenic not near genes chr2L 11317676 intergenic not near genes chr2L_4_11315001 chr2L_11315001 RAL-508 268 chr2L 11380603 11380640 chr2L 11380700 11380709 8 93 2.0 5.0 3.5 1.8 106 chr2L 11380603 intergenic not near genes chr2L 11380656 intergenic not near genes chr2L 11380709 intergenic not near genes chr2L_8_11380001 chr2L_11380001 RAL-508 269 chr2L 11418641 11418683 chr2L 11418740 11418782 10 95 2.0 4.0 3.0 2.5 141 chr2L 11418641 intergenic not near genes chr2L 11418712 intergenic not near genes chr2L 11418782 intergenic not near genes chr2L_10_11415001 chr2L_11415001 RAL-508 270 chr2L 11450105 11450156 chr2L 11450210 11450255 8 102 0.0 3.0 1.5 3.2 150 chr2L 11450105 intergenic not near genes chr2L 11450180 intergenic not near genes chr2L 11450255 intergenic not near genes chr2L_8_11450001 chr2L_11450001 RAL-508 271 chr2L 11455144 11455184 chr2L 11455252 11455293 7 108 3.0 5.0 4.0 1.4 149 chr2L 11455144 intergenic not near genes chr2L 11455218 intergenic not near genes chr2L 11455293 intergenic not near genes chr2L_7_11455001 chr2L_11455001 RAL-508 272 chr2L 11563642 11563664 chr2L 11568852 11568887 copia 9 5222 6.0 8.0 7.0 1.1 5245 chr2L 11563642 intergenic not near genes chr2L 11566264 intergenic not near genes chr2L 11568887 intergenic not near genes chr2L_9_11565001 chr2L_11565001 RAL-508 273 chr2L 11610552 11610571 chr2L 11610650 11610669 9 96 2.5 4.5 3.5 2.0 117 chr2L 11610552 intron,3` UTR kek2 +,spag4 - chr2L 11610610 intron,3` UTR kek2 +,spag4 - chr2L 11610669 intron,exon kek2 +,spag4 - chr2L_9_11610001 chr2L_11610001 RAL-508 274 chr2L 11614077 11614085 chr2L 11615556 11615566 hopper2 8 1500 1.5 5.5 3.5 1.8 1489 chr2L 11614077 intron kek2 + chr2L 11614822 intron kek2 + chr2L 11615566 intron kek2 + chr2L_8_11610001 chr2L_11610001 RAL-508 275 chr2L 11661169 11661205 chr2L 11661277 11661313 8 108 4.0 5.0 4.5 1.5 144 chr2L 11661169 intergenic CR44497 - chr2L 11661241 intergenic CR44497 -,CR44479 - chr2L 11661313 intergenic CR44497 -,CR44479 - chr2L_8_11660001 chr2L_11660001 RAL-508 276 chr2L 11672126 11672167 chr2L 11672253 11672293 9 127 0.0 4.0 2.0 3.0 167 chr2L 11672126 intergenic not near genes chr2L 11672210 intergenic not near genes chr2L 11672293 intergenic not near genes chr2L_9_11670001 chr2L_11670001 RAL-508 277 chr2L 11713486 11713539 chr2L 11720974 11721004 blood 12 7485 4.0 5.0 4.5 2.2 7518 chr2L 11713486 intergenic not near genes chr2L 11717245 intergenic not near genes chr2L 11721004 intergenic CR44143 + chr2L_12_11715001 chr2L_11715001 RAL-508 278 chr2L 11781022 11781194 chr2L 11781126 11781289 9 98 0.5 0.0 0.2 7.5 267 chr2L 11781022 intergenic not near genes chr2L 11781156 intergenic not near genes chr2L 11781289 intergenic not near genes chr2L_9_11780001 chr2L_11780001 RAL-508 279 chr2L 11820426 11820446 chr2L 11820526 11820547 10 101 3.0 6.0 4.5 1.8 121 chr2L 11820426 intron Pde1c - chr2L 11820486 intron Pde1c - chr2L 11820547 intron Pde1c - chr2L_10_11820001 chr2L_11820001 RAL-508 280 chr2L 11841348 11841367 chr2L 11841446 11841464 5 98 2.5 0.0 1.2 2.3 116 chr2L 11841348 intron Pde1c - chr2L 11841406 intron Pde1c - chr2L 11841464 intron Pde1c - chr2L_5_11840001 chr2L_11840001 RAL-508 281 chr2L 11844178 11844186 chr2L 11844280 11844288 4 102 8.0 0.0 4.0 0.8 110 chr2L 11844178 intron Pde1c - chr2L 11844233 intron Pde1c - chr2L 11844288 intron Pde1c - chr2L_4_11840001 chr2L_11840001 RAL-508 282 chr2L 11883842 11883864 chr2L 11883962 11883983 7 119 3.5 0.0 1.8 2.5 141 chr2L 11883842 intron Pde1c - chr2L 11883912 intron Pde1c - chr2L 11883983 intron Pde1c - chr2L_7_11880001 chr2L_11880001 RAL-508 283 chr2L 11886434 11886449 chr2L 11886553 11886568 4 119 8.0 3.0 5.5 0.6 134 chr2L 11886434 intron Pde1c - chr2L 11886501 intron Pde1c - chr2L 11886568 intron Pde1c - chr2L_4_11885001 chr2L_11885001 RAL-508 284 chr2L 11894341 11894389 chr2L 11894452 11894490 12 107 6.5 6.0 6.2 1.7 149 chr2L 11894341 intron Pde1c - chr2L 11894416 intron Pde1c - chr2L 11894490 intron Pde1c - chr2L_12_11890001 chr2L_11890001 RAL-508 285 chr2L 11908194 11908228 chr2L 11908554 11908588 8 359 3.5 1.5 2.5 2.3 394 chr2L 11908194 intron Pde1c - chr2L 11908391 intron Pde1c - chr2L 11908588 intron Pde1c - chr2L_8_11905001 chr2L_11905001 RAL-508 286 chr2L 12029191 12029225 chr2L 12029291 12029324 6 99 2.5 0.5 1.5 2.4 133 chr2L 12029191 intron dmGlut + chr2L 12029258 intron dmGlut + chr2L 12029324 intron dmGlut + chr2L_6_12025001 chr2L_12025001 RAL-508 287 chr2L 12067315 12067353 chr2L 12074387 12074425 297 4 7072 5.0 5.5 5.2 0.6 7110 chr2L 12067315 intergenic not near genes chr2L 12070870 intergenic not near genes chr2L 12074425 intergenic not near genes chr2L_4_12070001 chr2L_12070001 RAL-508 288 chr2L 12147778 12147817 chr2L 12147883 12147929 13 111 1.5 3.0 2.2 4.1 151 chr2L 12147778 intron CG31760 + chr2L 12147854 intron CG31760 + chr2L 12147929 intron CG31760 + chr2L_13_12145001 chr2L_12145001 RAL-508 289 chr2L 12176204 12176238 chr2L 12176305 12176339 6 101 3.5 1.5 2.5 1.7 135 chr2L 12176204 intron,intron aret +,atilla - chr2L 12176272 intron,intron aret +,atilla - chr2L 12176339 intron,intron aret +,atilla - chr2L_6_12175001 chr2L_12175001 RAL-508 290 chr2L 12210040 12210044 chr2L 12210149 12210153 4 109 3.5 8.0 5.8 0.6 113 chr2L 12210040 intron aret + chr2L 12210096 intron aret + chr2L 12210153 intron aret + chr2L_4_12210001 chr2L_12210001 RAL-508 291 chr2L 12228168 12228214 chr2L 12228305 12228351 9 136 5.0 3.0 4.0 1.8 183 chr2L 12228168 intron aret + chr2L 12228260 intron aret + chr2L 12228351 intron aret + chr2L_9_12225001 chr2L_12225001 RAL-508 292 chr2L 12272164 12272195 chr2L 12272260 12272291 9 96 0.5 5.0 2.8 2.4 127 chr2L 12272164 intron aret + chr2L 12272228 intron aret + chr2L 12272291 intron aret + chr2L_9_12270001 chr2L_12270001 RAL-508 293 chr2L 12305205 12305235 chr2L 12305341 12305343 12 127 3.0 3.5 3.2 2.9 138 chr2L 12305205 intron aret + chr2L 12305274 intron aret + chr2L 12305343 intron aret + chr2L_12_12305001 chr2L_12305001 RAL-508 294 chr2L 12366842 12366886 chr2L 12366948 12366992 6 104 2.0 3.0 2.5 1.7 150 chr2L 12366842 intron bru-2 + chr2L 12366917 intron bru-2 + chr2L 12366992 intron bru-2 + chr2L_6_12365001 chr2L_12365001 RAL-508 295 chr2L 12454116 12454140 chr2L 12454216 12454229 5 92 7.5 6.5 7.0 0.6 113 chr2L 12454116 intergenic not near genes chr2L 12454172 intergenic not near genes chr2L 12454229 intergenic not near genes chr2L_5_12450001 chr2L_12450001 RAL-508 296 chr2L 12471137 12471140 chr2L 12471215 12471236 5 91 4.5 11.0 7.8 0.6 99 chr2L 12471137 intron bun - chr2L 12471186 intron bun - chr2L 12471236 intron bun - chr2L_5_12470001 chr2L_12470001 RAL-508 297 chr2L 12487876 12487917 chr2L 12487971 12488014 12 97 6.0 7.5 6.8 1.5 138 chr2L 12487876 intron bun - chr2L 12487945 intron bun - chr2L 12488014 intron bun - chr2L_12_12485001 chr2L_12485001 RAL-508 298 chr2L 12524106 12524129 chr2L 12524241 12524264 7 133 10.0 2.0 6.0 1.0 158 chr2L 12524106 intron bun - chr2L 12524185 intron bun - chr2L 12524264 intron bun - chr2L_7_12520001 chr2L_12520001 RAL-508 299 chr2L 12527189 12527197 chr2L 12527354 12527362 6 165 11.0 0.0 5.5 0.9 173 chr2L 12527189 intron bun - chr2L 12527276 intron bun - chr2L 12527362 intron bun - chr2L_6_12525001 chr2L_12525001 RAL-508 300 chr2L 12558300 12558351 chr2L 12565449 12565497 HMS-Beagle 11 7145 3.5 2.5 3.0 2.8 7197 chr2L 12558300 intergenic not near genes chr2L 12561898 intergenic not near genes chr2L 12565497 intergenic not near genes chr2L_11_12560001 chr2L_12560001 RAL-508 301 chr2L 12598185 12598198 chr2L 12598282 12598295 6 97 2.5 5.5 4.0 1.2 110 chr2L 12598185 intron nub + chr2L 12598240 intron nub + chr2L 12598295 intron nub + chr2L_6_12595001 chr2L_12595001 RAL-508 302 chr2L 12598987 12598996 chr2L 12599089 12599098 6 102 0.0 9.5 4.8 1.0 111 chr2L 12598987 intron nub + chr2L 12599042 intron nub + chr2L 12599098 intron nub + chr2L_6_12595001 chr2L_12595001 RAL-508 303 chr2L 12619887 12619905 chr2L 12619983 12620001 4 95 4.5 3.0 3.8 0.8 114 chr2L 12619887 intron,intron nub +,Ref2 - chr2L 12619944 intron,intron nub +,Ref2 - chr2L 12620001 intron,intron nub +,Ref2 - chr2L_4_12615001 chr2L_12615001 RAL-508 304 chr2L 12630015 12630062 chr2L 12631829 12631836 10 1809 1.0 7.5 4.2 1.9 1821 chr2L 12630015 intron Ref2 - chr2L 12630926 intron Ref2 - chr2L 12631836 intron Ref2 - chr2L_10_12630001 chr2L_12630001 RAL-508 305 chr2L 12638759 12638804 chr2L 12638882 12638927 16 123 1.5 0.5 1.0 8.0 168 chr2L 12638759 intron Ref2 - chr2L 12638843 intron Ref2 - chr2L 12638927 intron Ref2 - chr2L_16_12635001 chr2L_12635001 RAL-508 306 chr2L 12728906 12728949 chr2L 12729166 12729202 pogo 7 258 6.5 2.5 4.5 1.3 296 chr2L 12728906 intron MRP + chr2L 12729054 intron MRP + chr2L 12729202 exon MRP + chr2L_7_12725001 chr2L_12725001 RAL-508 307 chr2L 12731045 12731085 chr2L 12735832 12735872 F-element 8 4787 4.0 4.0 4.0 1.6 4827 chr2L 12731045 intron MRP + chr2L 12733458 intron MRP + chr2L 12735872 intron MRP + chr2L_8_12730001 chr2L_12730001 RAL-508 308 chr2L 12739156 12739198 chr2L 12743957 12743999 Doc 8 4800 4.5 7.5 6.0 1.1 4843 chr2L 12739156 exon MRP + chr2L 12741578 intron MRP + chr2L 12743999 exon MRP + chr2L_8_12740001 chr2L_12740001 RAL-508 309 chr2L 12751310 12751340 chr2L 12751397 12751443 10 99 1.5 4.0 2.8 2.6 133 chr2L 12751310 intergenic not near genes chr2L 12751376 intergenic not near genes chr2L 12751443 intergenic not near genes chr2L_10_12750001 chr2L_12750001 RAL-508 310 chr2L 12751667 12751709 chr2L 12751803 12751830 19 133 9.0 5.0 7.0 2.4 163 chr2L 12751667 intergenic not near genes chr2L 12751748 intergenic not near genes chr2L 12751830 intergenic not near genes chr2L_19_12750001 chr2L_12750001 RAL-508 311 chr2L 12763808 12763870 chr2L 12764040 12764090 BS 7 227 0.5 0.0 0.2 5.8 282 chr2L 12763808 intergenic not near genes chr2L 12763949 intergenic not near genes chr2L 12764090 intergenic not near genes chr2L_7_12760001 chr2L_12760001 RAL-508 312 chr2L 12781785 12781812 chr2L 12789254 12789281 Quasimodo 9 7470 6.0 6.5 6.2 1.2 7496 chr2L 12781785 intergenic not near genes chr2L 12785533 intergenic not near genes chr2L 12789281 intergenic not near genes chr2L_9_12785001 chr2L_12785001 RAL-508 313 chr2L 12791602 12791633 chr2L 12795281 12795308 F-element 15 3682 3.0 5.0 4.0 3.0 3706 chr2L 12791602 intergenic not near genes chr2L 12793455 intergenic not near genes chr2L 12795308 intergenic not near genes chr2L_15_12790001 chr2L_12790001 RAL-508 314 chr2L 12833031 12833077 chr2L 12833133 12833179 10 101 3.5 1.5 2.5 2.9 148 chr2L 12833031 intergenic not near genes chr2L 12833105 intergenic not near genes chr2L 12833179 intergenic not near genes chr2L_10_12830001 chr2L_12830001 RAL-508 315 chr2L 12861681 12861716 chr2L 12863168 12863203 hobo 12 1486 8.0 4.5 6.2 1.7 1522 chr2L 12861681 intergenic not near genes chr2L 12862442 intergenic not near genes chr2L 12863203 intergenic not near genes chr2L_12_12860001 chr2L_12860001 RAL-508 316 chr2L 12894027 12894051 chr2L 12895493 12895509 hobo 4 1465 5.5 9.0 7.2 0.5 1482 chr2L 12894027 intergenic not near genes chr2L 12894768 intergenic not near genes chr2L 12895509 intergenic not near genes chr2L_4_12890001 chr2L_12890001 RAL-508 317 chr2L 12905457 12905491 chr2L 12905560 12905595 7 104 6.5 2.5 4.5 1.3 138 chr2L 12905457 intergenic not near genes chr2L 12905526 intergenic not near genes chr2L 12905595 intergenic not near genes chr2L_7_12905001 chr2L_12905001 RAL-508 318 chr2L 12930472 12930496 chr2L 12930568 12930592 9 96 1.0 3.0 2.0 3.0 120 chr2L 12930472 intergenic not near genes chr2L 12930532 intergenic not near genes chr2L 12930592 intergenic not near genes chr2L_9_12930001 chr2L_12930001 RAL-508 319 chr2L 12933830 12933881 chr2L 12941317 12941368 blood 17 7482 5.5 2.0 3.8 3.5 7538 chr2L 12933830 intergenic not near genes chr2L 12937599 intergenic not near genes chr2L 12941368 intergenic not near genes chr2L_17_12935001 chr2L_12935001 RAL-508 320 chr2L 13152232 13152250 chr2L 13152316 13152326 6 91 6.5 7.5 7.0 0.8 94 chr2L 13152232 intergenic not near genes chr2L 13152279 intergenic not near genes chr2L 13152326 intergenic not near genes chr2L_6_13150001 chr2L_13150001 RAL-508 321 chr2L 13205581 13205619 chr2L 13205686 13205698 9 102 1.5 4.5 3.0 2.2 117 chr2L 13205581 intron Pect + chr2L 13205640 intron Pect + chr2L 13205698 intron Pect + chr2L_9_13205001 chr2L_13205001 RAL-508 322 chr2L 13323818 13323860 chr2L 13324362 13324405 16 542 6.0 5.0 5.5 2.5 587 chr2L 13323818 intron CG43778 - chr2L 13324112 intron CG43778 - chr2L 13324405 intron CG43778 - chr2L_16_13320001 chr2L_13320001 RAL-508 323 chr2L 13351802 13351848 chr2L 13351908 13351953 12 105 2.0 4.0 3.0 3.0 151 chr2L 13351802 exon CG9395 - chr2L 13351878 intron CG9395 - chr2L 13351953 exon CG9395 - chr2L_12_13350001 chr2L_13350001 RAL-508 324 chr2L 13398703 13398748 chr2L 13398801 13398848 6 100 3.0 1.0 2.0 2.0 145 chr2L 13398703 intergenic CG10859 -,CR44600 -,CG7110 + chr2L 13398776 intergenic CR44600 -,CG10859 -,CG7110 + chr2L 13398848 intergenic CR44600 -,CG7110 +,CG10859 - chr2L_6_13395001 chr2L_13395001 RAL-508 325 chr2L 13405632 13405676 chr2L 13410449 13410493 Doc 15 4814 3.5 5.0 4.2 2.9 4861 chr2L 13405632 exon CG7110 + chr2L 13408062 intron CG7110 + chr2L 13410493 intron CG7110 + chr2L_15_13405001 chr2L_13405001 RAL-508 326 chr2L 13449467 13449495 chr2L 13456923 13456949 Quasimodo 9 7455 1.0 3.5 2.2 2.8 7482 chr2L 13449467 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453208 intron CG42784 + chr2L 13456949 intron CG42784 + chr2L_9_13450001 chr2L_13450001 RAL-508 327 chr2L 13481439 13481469 chr2L 13482066 13482096 jockey 7 626 8.5 6.0 7.2 0.9 657 chr2L 13481439 intron CG42784 + chr2L 13481768 intron CG42784 + chr2L 13482096 intron CG42784 + chr2L_7_13480001 chr2L_13480001 RAL-508 328 chr2L 13522264 13522277 chr2L 13527589 13527603 Transpac 4 5323 4.0 7.5 5.8 0.6 5339 chr2L 13522264 intron B4 - chr2L 13524934 intron B4 - chr2L 13527603 intron B4 - chr2L_4_13520001 chr2L_13520001 RAL-508 329 chr2L 13536259 13536297 chr2L 13536371 13536409 6 109 2.0 3.5 2.8 1.6 150 chr2L 13536259 intron B4 - chr2L 13536334 intron B4 - chr2L 13536409 intron B4 - chr2L_6_13535001 chr2L_13535001 RAL-508 330 chr2L 13560397 13560420 chr2L 13565238 13565261 F-element 7 4840 1.5 2.5 2.0 2.3 4864 chr2L 13560397 intron kuz + chr2L 13562829 intron kuz + chr2L 13565261 intron kuz + chr2L_7_13560001 chr2L_13560001 RAL-508 331 chr2L 13605555 13605608 chr2L 13605657 13605710 17 93 3.0 2.5 2.8 4.5 155 chr2L 13605555 intron kuz + chr2L 13605632 intron kuz + chr2L 13605710 intron kuz + chr2L_17_13605001 chr2L_13605001 RAL-508 332 chr2L 13630241 13630291 chr2L 13630357 13630406 11 112 4.5 4.0 4.2 2.1 165 chr2L 13630241 intron kuz + chr2L 13630324 intron kuz + chr2L 13630406 intron kuz + chr2L_11_13630001 chr2L_13630001 RAL-508 333 chr2L 13693003 13693040 chr2L 13693099 13693117 7 84 4.0 4.5 4.2 1.3 114 chr2L 13693003 intron CG31814 - chr2L 13693060 intron CG31814 - chr2L 13693117 intron CG31814 - chr2L_7_13690001 chr2L_13690001 RAL-508 334 chr2L 13701865 13701913 chr2L 13701965 13702013 10 98 3.5 4.0 3.8 2.1 148 chr2L 13701865 intron CG31814 - chr2L 13701939 intron CG31814 - chr2L 13702013 intron CG31814 - chr2L_10_13700001 chr2L_13700001 RAL-508 335 chr2L 13721134 13721176 chr2L 13721235 13721236 16 102 5.0 3.5 4.2 3.1 102 chr2L 13721134 intergenic not near genes chr2L 13721185 intergenic not near genes chr2L 13721236 intergenic not near genes chr2L_16_13720001 chr2L_13720001 RAL-508 336 chr2L 13740891 13740936 chr2L 13741344 13741358 19 450 4.5 8.5 6.5 2.5 467 chr2L 13740891 intergenic not near genes chr2L 13741124 intergenic not near genes chr2L 13741358 intergenic not near genes chr2L_19_13740001 chr2L_13740001 RAL-508 337 chr2L 13761790 13761815 chr2L 13762919 13762945 Doc 5 1130 7.0 3.5 5.2 0.8 1155 chr2L 13761790 intron TM9SF4 + chr2L 13762368 intron TM9SF4 + chr2L 13762945 intron TM9SF4 + chr2L_5_13760001 chr2L_13760001 RAL-508 338 chr2L 13800171 13800206 chr2L 13800295 13800330 12 124 2.0 4.5 3.2 2.9 159 chr2L 13800171 intergenic Sec71 + chr2L 13800250 intergenic not near genes chr2L 13800330 intergenic not near genes chr2L_12_13800001 chr2L_13800001 RAL-508 339 chr2L 13803804 13803813 chr2L 13806566 13806578 5 2763 17.5 14.5 16.0 0.3 2774 chr2L 13803804 5` UTR CAH1 + chr2L 13805191 intron CAH1 + chr2L 13806578 intron CAH1 + chr2L_5_13805001 chr2L_13805001 RAL-508 340 chr2L 13842113 13842142 chr2L 13842217 13842245 11 103 1.0 0.0 0.5 7.3 132 chr2L 13842113 intron CenG1A + chr2L 13842179 intron CenG1A + chr2L 13842245 intron CenG1A + chr2L_11_13840001 chr2L_13840001 RAL-508 341 chr2L 13853096 13853111 chr2L 13862248 13862280 roo 6 9162 3.0 3.5 3.2 1.4 9184 chr2L 13853096 intron CenG1A + chr2L 13857688 intron CenG1A + chr2L 13862280 intron CenG1A + chr2L_6_13855001 chr2L_13855001 RAL-508 342 chr2L 13913571 13913603 chr2L 13913704 13913736 11 133 6.5 7.5 7.0 1.4 165 chr2L 13913571 intergenic not near genes chr2L 13913654 intergenic not near genes chr2L 13913736 intergenic not near genes chr2L_11_13910001 chr2L_13910001 RAL-508 343 chr2L 13928855 13928889 chr2L 13928977 13929024 12 125 1.0 2.5 1.8 4.3 169 chr2L 13928855 intron Ance-3 + chr2L 13928940 intron Ance-3 + chr2L 13929024 intron Ance-3 + chr2L_12_13925001 chr2L_13925001 RAL-508 344 chr2L 13981508 13981548 chr2L 13981619 13981660 11 111 5.5 5.5 5.5 1.7 152 chr2L 13981508 exon NimC2 + chr2L 13981584 intron NimC2 + chr2L 13981660 intron NimC2 + chr2L_11_13980001 chr2L_13980001 RAL-508 345 chr2L 13988269 13988304 chr2L 13988376 13988411 8 102 1.5 3.5 2.5 2.3 142 chr2L 13988269 intron rk - chr2L 13988340 intron rk - chr2L 13988411 intron rk - chr2L_8_13985001 chr2L_13985001 RAL-508 346 chr2L 13988610 13988642 chr2L 13988711 13988754 14 108 0.0 5.0 2.5 4.0 144 chr2L 13988610 intron rk - chr2L 13988682 intron rk - chr2L 13988754 intron rk - chr2L_14_13985001 chr2L_13985001 RAL-508 347 chr2L 14109497 14109545 chr2L 14109608 14109656 7 111 3.0 2.5 2.8 1.8 159 chr2L 14109497 intergenic CG15293 -,CG31769 - chr2L 14109576 intergenic CG31769 -,CG15293 - chr2L 14109656 3` UTR CG31769 - chr2L_7_14105001 chr2L_14105001 RAL-508 348 chr2L 14271926 14271975 chr2L 14272171 14272223 7 239 2.5 3.5 3.0 1.8 297 chr2L 14271926 intron wb + chr2L 14272074 intron wb + chr2L 14272223 intron wb + chr2L_7_14270001 chr2L_14270001 RAL-508 349 chr2L 14279739 14279784 chr2L 14281237 14281282 7 1500 26.0 13.0 19.5 0.3 1543 chr2L 14279739 intron wb + chr2L 14280510 intron wb + chr2L 14281282 intron wb + chr2L_7_14280001 chr2L_14280001 RAL-508 350 chr2L 14333920 14333929 chr2L 14334040 14334049 6 120 3.0 5.0 4.0 1.2 129 chr2L 14333920 intergenic ms(2)34Fe +,CG33090 + chr2L 14333984 intergenic ms(2)34Fe +,CG33090 + chr2L 14334049 intergenic CG33090 +,ms(2)34Fe + chr2L_6_14330001 chr2L_14330001 RAL-508 351 chr2L 14369112 14369160 chr2L 14369248 14369296 7 136 2.0 2.5 2.2 2.2 184 chr2L 14369112 intergenic not near genes chr2L 14369204 intergenic not near genes chr2L 14369296 intergenic not near genes chr2L_7_14365001 chr2L_14365001 RAL-508 352 chr2L 14378635 14378671 chr2L 14378734 14378767 10 97 4.5 0.0 2.2 3.1 132 chr2L 14378635 3` UTR ppk - chr2L 14378701 3` UTR ppk - chr2L 14378767 3` UTR ppk - chr2L_10_14375001 chr2L_14375001 RAL-508 353 chr2L 14395557 14395585 chr2L 14395662 14395690 4 104 2.5 5.0 3.8 0.8 133 chr2L 14395557 intron elB - chr2L 14395624 intron elB - chr2L 14395690 intron elB - chr2L_4_14395001 chr2L_14395001 RAL-508 354 chr2L 14532186 14532230 chr2L 14532280 14532329 7 93 4.5 4.5 4.5 1.3 143 chr2L 14532186 intergenic CR44852 - chr2L 14532258 intergenic CR44852 - chr2L 14532329 intergenic CR44852 - chr2L_7_14530001 chr2L_14530001 RAL-508 355 chr2L 14557232 14557278 chr2L 14557347 14557394 7 114 1.0 4.0 2.5 2.0 162 chr2L 14557232 intergenic not near genes chr2L 14557313 intergenic not near genes chr2L 14557394 intergenic not near genes chr2L_7_14555001 chr2L_14555001 RAL-508 356 chr2L 14575507 14575514 chr2L 14575773 14575780 4 265 2.0 8.0 5.0 0.7 273 chr2L 14575507 intergenic not near genes chr2L 14575644 intergenic not near genes chr2L 14575780 intergenic not near genes chr2L_4_14575001 chr2L_14575001 RAL-508 357 chr2L 14577899 14577953 chr2L 14578191 14578201 5 283 1.5 4.0 2.8 1.3 302 chr2L 14577899 intergenic not near genes chr2L 14578050 intergenic not near genes chr2L 14578201 intergenic not near genes chr2L_5_14575001 chr2L_14575001 RAL-508 358 chr2L 14588366 14588417 chr2L 14588540 14588591 16 170 5.5 1.0 3.2 3.8 225 chr2L 14588366 intergenic CG42680 - chr2L 14588478 intergenic CG42680 - chr2L 14588591 intergenic CG42680 - chr2L_16_14585001 chr2L_14585001 RAL-508 359 chr2L 14601962 14602002 chr2L 14602062 14602106 15 103 6.5 5.5 6.0 2.1 144 chr2L 14601962 exon osp - chr2L 14602034 intron osp - chr2L 14602106 intron osp - chr2L_15_14600001 chr2L_14600001 RAL-508 360 chr2L 14639166 14639189 chr2L 14639364 14639390 7 200 2.0 2.5 2.2 2.2 224 chr2L 14639166 intron osp - chr2L 14639278 intron osp - chr2L 14639390 intron osp - chr2L_7_14635001 chr2L_14635001 RAL-508 361 chr2L 14642553 14642556 chr2L 14651736 14651739 roo 4 9183 6.5 2.0 4.2 0.8 9186 chr2L 14642553 intron osp - chr2L 14647146 intron osp - chr2L 14651739 intron osp - chr2L_4_14645001 chr2L_14645001 RAL-508 362 chr2L 14658678 14658718 chr2L 14658779 14658819 9 101 2.0 2.0 2.0 3.0 141 chr2L 14658678 intron osp - chr2L 14658748 intron osp - chr2L 14658819 intron osp - chr2L_9_14655001 chr2L_14655001 RAL-508 363 chr2L 14680215 14680261 chr2L 14680844 14680889 18 628 2.0 3.0 2.5 5.1 674 chr2L 14680215 intron osp - chr2L 14680552 intron osp - chr2L 14680889 intron osp - chr2L_18_14680001 chr2L_14680001 RAL-508 364 chr2L 14686573 14686600 chr2L 14686832 14686859 4 259 2.5 3.5 3.0 1.0 286 chr2L 14686573 intron osp - chr2L 14686716 intron osp - chr2L 14686859 intron osp - chr2L_4_14685001 chr2L_14685001 RAL-508 365 chr2L 14692750 14692776 chr2L 14693019 14693049 11 271 3.0 3.5 3.2 2.6 299 chr2L 14692750 intergenic not near genes chr2L 14692900 intergenic not near genes chr2L 14693049 intergenic not near genes chr2L_11_14690001 chr2L_14690001 RAL-508 366 chr2L 14707188 14707238 chr2L 14707325 14707374 10 138 1.5 1.5 1.5 4.0 186 chr2L 14707188 intergenic not near genes chr2L 14707281 intergenic not near genes chr2L 14707374 intergenic not near genes chr2L_10_14705001 chr2L_14705001 RAL-508 367 chr2L 14712836 14712854 chr2L 14713588 14713633 12 762 17.5 39.5 28.5 0.4 797 chr2L 14712836 exon CG15282 + chr2L 14713234 intergenic CG15282 + chr2L 14713633 intergenic CG34165 + chr2L_12_14710001 chr2L_14710001 RAL-508 368 chr2L 14731985 14732030 chr2L 14732145 14732190 10 159 4.0 4.0 4.0 2.0 205 chr2L 14731985 intergenic not near genes chr2L 14732088 intergenic CR44857 - chr2L 14732190 intergenic CR44857 - chr2L_10_14730001 chr2L_14730001 RAL-508 369 chr2L 14803862 14803910 chr2L 14809083 14809123 copia 20 5218 7.5 6.5 7.0 2.5 5261 chr2L 14803862 intergenic not near genes chr2L 14806492 intergenic not near genes chr2L 14809123 intergenic not near genes chr2L_20_14805001 chr2L_14805001 RAL-508 370 chr2L 14840954 14841004 chr2L 14841062 14841109 11 106 1.0 4.0 2.5 3.1 155 chr2L 14840954 3` UTR CR43805 - chr2L 14841032 3` UTR CR43805 - chr2L 14841109 3` UTR CR43805 - chr2L_11_14840001 chr2L_14840001 RAL-508 371 chr2L 14843479 14843531 chr2L 14843803 14843853 18 323 4.5 5.0 4.8 3.1 374 chr2L 14843479 intergenic CG42682 + chr2L 14843666 intergenic not near genes chr2L 14843853 intergenic not near genes chr2L_18_14840001 chr2L_14840001 RAL-508 372 chr2L 14874900 14874907 chr2L 14874996 14875001 4 97 2.0 5.5 3.8 0.8 101 chr2L 14874900 3` UTR CG15278 - chr2L 14874950 3` UTR CG15278 - chr2L 14875001 3` UTR CG15278 - chr2L_4_14870001 chr2L_14870001 RAL-508 373 chr2L 14874908 14874932 chr2L 14874994 14875036 6 90 1.5 4.5 3.0 1.5 128 chr2L 14874908 3` UTR CG15278 - chr2L 14874972 3` UTR CG15278 - chr2L 14875036 3` UTR CG15278 - chr2L_6_14870001 chr2L_14870001 RAL-508 374 chr2L 14889940 14889981 chr2L 14890383 14890425 jockey 25 444 6.5 4.5 5.5 3.8 485 chr2L 14889940 intergenic not near genes chr2L 14890182 intergenic not near genes chr2L 14890425 intergenic not near genes chr2L_25_14890001 chr2L_14890001 RAL-508 375 chr2L 14905719 14905761 chr2L 14905836 14905878 7 115 1.0 0.0 0.5 4.7 159 chr2L 14905719 intergenic not near genes chr2L 14905798 intergenic not near genes chr2L 14905878 intergenic not near genes chr2L_7_14905001 chr2L_14905001 RAL-508 376 chr2L 14963384 14963435 chr2L 14964474 14964505 10 1084 15.5 27.0 21.2 0.5 1121 chr2L 14963384 intron CG42313 - chr2L 14963944 intron CG42313 - chr2L 14964505 intron CG42313 - chr2L_10_14960001 chr2L_14960001 RAL-508 377 chr2L 14984377 14984396 chr2L 14991983 14992018 opus 12 7617 7.5 4.5 6.0 1.7 7641 chr2L 14984377 intron mol - chr2L 14988198 intron mol - chr2L 14992018 intron mol - chr2L_12_14985001 chr2L_14985001 RAL-508 378 chr2L 15013136 15013178 chr2L 15013259 15013307 7 125 3.0 2.5 2.8 1.8 171 chr2L 15013136 intergenic CR43856 - chr2L 15013222 intergenic not near genes chr2L 15013307 intergenic not near genes chr2L_7_15010001 chr2L_15010001 RAL-508 379 chr2L 15021420 15021467 chr2L 15021516 15021563 15 96 4.0 3.0 3.5 3.3 143 chr2L 15021420 intron GABA-B-R1 + chr2L 15021492 intron GABA-B-R1 + chr2L 15021563 intron GABA-B-R1 + chr2L_15_15020001 chr2L_15020001 RAL-508 380 chr2L 15044698 15044726 chr2L 15044794 15044812 7 94 4.0 0.0 2.0 2.3 114 chr2L 15044698 intergenic ck - chr2L 15044755 intergenic ck - chr2L 15044812 intergenic ck - chr2L_7_15040001 chr2L_15040001 RAL-508 381 chr2L 15077874 15078083 chr2L 15077982 15078191 13 107 4.0 2.5 3.2 3.1 317 chr2L 15077874 intron CG15270 + chr2L 15078032 intron CG15270 + chr2L 15078191 intron CG15270 + chr2L_13_15075001 chr2L_15075001 RAL-508 382 chr2L 15080914 15080929 chr2L 15081029 15081045 5 116 4.5 3.5 4.0 1.0 131 chr2L 15080914 intron CG15270 + chr2L 15080980 intron CG15270 + chr2L 15081045 intron CG15270 + chr2L_5_15080001 chr2L_15080001 RAL-508 383 chr2L 15082640 15082690 chr2L 15082754 15082804 11 113 3.5 5.0 4.2 2.1 164 chr2L 15082640 intron CG15270 + chr2L 15082722 intron CG15270 + chr2L 15082804 intron CG15270 + chr2L_11_15080001 chr2L_15080001 RAL-508 384 chr2L 15103840 15103858 chr2L 15103957 15103975 7 116 1.5 3.5 2.5 2.0 135 chr2L 15103840 intergenic not near genes chr2L 15103908 intergenic not near genes chr2L 15103975 intergenic not near genes chr2L_7_15100001 chr2L_15100001 RAL-508 385 chr2L 15111930 15111935 chr2L 15112059 15112064 4 129 3.0 5.0 4.0 0.8 134 chr2L 15111930 intron CG15269 + chr2L 15111997 intron CG15269 + chr2L 15112064 intron CG15269 + chr2L_4_15110001 chr2L_15110001 RAL-508 386 chr2L 15122766 15122800 chr2L 15122860 15122900 5 99 1.5 1.5 1.5 2.0 134 chr2L 15122766 intergenic not near genes chr2L 15122833 intergenic not near genes chr2L 15122900 intergenic not near genes chr2L_5_15120001 chr2L_15120001 RAL-508 387 chr2L 15226365 15226390 chr2L 15226459 15226486 6 91 3.0 6.5 4.8 1.0 121 chr2L 15226365 intergenic not near genes chr2L 15226426 intergenic not near genes chr2L 15226486 intergenic not near genes chr2L_6_15225001 chr2L_15225001 RAL-508 388 chr2L 15283990 15284040 chr2L 15284087 15284134 7 96 1.0 3.5 2.2 2.2 144 chr2L 15283990 intergenic not near genes chr2L 15284062 intergenic not near genes chr2L 15284134 intergenic not near genes chr2L_7_15280001 chr2L_15280001 RAL-508 389 chr2L 15309332 15309379 chr2L 15309455 15309502 9 122 3.5 2.0 2.8 2.4 170 chr2L 15309332 intergenic not near genes chr2L 15309417 intergenic not near genes chr2L 15309502 intergenic not near genes chr2L_9_15305001 chr2L_15305001 RAL-508 390 chr2L 15342757 15342784 chr2L 15343286 15343299 8 535 5.0 4.5 4.8 1.4 542 chr2L 15342757 intergenic not near genes chr2L 15343028 intergenic not near genes chr2L 15343299 intergenic not near genes chr2L_8_15340001 chr2L_15340001 RAL-508 391 chr2L 15343518 15343541 chr2L 15343623 15343645 4 104 4.5 0.0 2.2 1.2 127 chr2L 15343518 intergenic not near genes chr2L 15343582 intergenic not near genes chr2L 15343645 intergenic not near genes chr2L_4_15340001 chr2L_15340001 RAL-508 392 chr2L 15347562 15347609 chr2L 15347662 15347709 15 97 4.5 4.5 4.5 2.7 147 chr2L 15347562 intergenic not near genes chr2L 15347636 intergenic not near genes chr2L 15347709 intergenic not near genes chr2L_15_15345001 chr2L_15345001 RAL-508 393 chr2L 15375796 15375836 chr2L 15375928 15375968 6 132 2.5 1.0 1.8 2.1 172 chr2L 15375796 intergenic not near genes chr2L 15375882 intergenic not near genes chr2L 15375968 intergenic not near genes chr2L_6_15375001 chr2L_15375001 RAL-508 394 chr2L 15394167 15394185 chr2L 15394273 15394295 4 109 2.5 0.5 1.5 1.6 128 chr2L 15394167 intergenic not near genes chr2L 15394231 intergenic not near genes chr2L 15394295 intergenic not near genes chr2L_4_15390001 chr2L_15390001 RAL-508 395 chr2L 15401236 15401287 chr2L 15401333 15401385 18 93 4.5 4.0 4.2 3.5 149 chr2L 15401236 intergenic not near genes chr2L 15401310 intergenic not near genes chr2L 15401385 intergenic not near genes chr2L_18_15400001 chr2L_15400001 RAL-508 396 chr2L 15435161 15435212 chr2L 15435271 15435322 4 110 2.5 2.5 2.5 1.1 161 chr2L 15435161 3` UTR CG4161 + chr2L 15435242 3` UTR CG4161 + chr2L 15435322 intergenic CG4161 +,CR44861 + chr2L_4_15435001 chr2L_15435001 RAL-508 397 chr2L 15446032 15446074 chr2L 15453518 15453563 blood 7 7487 4.0 3.0 3.5 1.6 7531 chr2L 15446032 intergenic not near genes chr2L 15449798 intergenic not near genes chr2L 15453563 intergenic not near genes chr2L_7_15445001 chr2L_15445001 RAL-508 398 chr2L 15490027 15490037 chr2L 15490163 15490173 4 136 0.0 5.0 2.5 1.1 146 chr2L 15490027 intergenic not near genes chr2L 15490100 intergenic not near genes chr2L 15490173 intergenic not near genes chr2L_4_15490001 chr2L_15490001 RAL-508 399 chr2L 15514318 15514323 chr2L 15514419 15514427 4 102 4.0 6.0 5.0 0.7 109 chr2L 15514318 intergenic not near genes chr2L 15514372 intergenic not near genes chr2L 15514427 intergenic not near genes chr2L_4_15510001 chr2L_15510001 RAL-508 400 chr2L 15586393 15586417 chr2L 15593465 15593489 297 4 7071 5.0 4.0 4.5 0.7 7096 chr2L 15586393 intergenic not near genes chr2L 15589941 intergenic not near genes chr2L 15593489 intergenic not near genes chr2L_4_15585001 chr2L_15585001 RAL-508 401 chr2L 15598773 15598798 chr2L 15598871 15598897 9 99 5.5 0.0 2.8 2.4 124 chr2L 15598773 intergenic not near genes chr2L 15598835 intergenic not near genes chr2L 15598897 intergenic not near genes chr2L_9_15595001 chr2L_15595001 RAL-508 402 chr2L 15751424 15751470 chr2L 15751520 15751566 4 96 1.0 3.0 2.0 1.3 142 chr2L 15751424 intergenic snRNA:U5:35D -,l(2)35Di - chr2L 15751495 intergenic snRNA:U5:35D -,l(2)35Di - chr2L 15751566 3` UTR snRNA:U5:35D - chr2L_4_15750001 chr2L_15750001 RAL-508 403 chr2L 15821065 15821072 chr2L 15821182 15821192 4 119 0.0 0.5 0.2 3.3 127 chr2L 15821065 intergenic not near genes chr2L 15821128 intergenic not near genes chr2L 15821192 intergenic not near genes chr2L_4_15820001 chr2L_15820001 RAL-508 404 chr2L 15852046 15852077 chr2L 15852133 15852181 7 94 4.5 8.0 6.2 1.0 135 chr2L 15852046 intergenic not near genes chr2L 15852114 intergenic CG13243 + chr2L 15852181 intergenic CG13243 + chr2L_7_15850001 chr2L_15850001 RAL-508 405 chr2L 15887696 15887745 chr2L 15887849 15887896 18 153 1.5 5.5 3.5 4.0 200 chr2L 15887696 intergenic not near genes chr2L 15887796 intergenic not near genes chr2L 15887896 intergenic not near genes chr2L_18_15885001 chr2L_15885001 RAL-508 406 chr2L 15912111 15912117 chr2L 15912224 15912230 4 113 2.5 6.0 4.2 0.8 119 chr2L 15912111 intron beat-Ib - chr2L 15912170 intron beat-Ib - chr2L 15912230 intron beat-Ib - chr2L_4_15910001 chr2L_15910001 RAL-508 407 chr2L 15954166 15954206 chr2L 15954265 15954307 7 98 3.0 2.5 2.8 1.8 141 chr2L 15954166 intron beat-Ib - chr2L 15954236 intron beat-Ib - chr2L 15954307 intron beat-Ib - chr2L_7_15950001 chr2L_15950001 RAL-508 408 chr2L 15956009 15956055 chr2L 15957494 15957540 hobo 18 1485 5.5 6.5 6.0 2.6 1531 chr2L 15956009 intron beat-Ib - chr2L 15956774 intron beat-Ib - chr2L 15957540 intron beat-Ib - chr2L_18_15955001 chr2L_15955001 RAL-508 409 chr2L 16001448 16001489 chr2L 16001554 16001589 8 106 0.0 2.5 1.2 3.6 141 chr2L 16001448 intron beat-Ic + chr2L 16001518 intron beat-Ic + chr2L 16001589 intron beat-Ic + chr2L_8_16000001 chr2L_16000001 RAL-508 410 chr2L 16008672 16008721 chr2L 16008770 16008819 6 98 1.5 0.5 1.0 3.0 147 chr2L 16008672 intron beat-Ic + chr2L 16008746 intron beat-Ic + chr2L 16008819 intron beat-Ic + chr2L_6_16005001 chr2L_16005001 RAL-508 411 chr2L 16058104 16058152 chr2L 16058265 16058313 13 161 2.5 3.0 2.8 3.4 209 chr2L 16058104 intron beat-Ia + chr2L 16058208 intron beat-Ia + chr2L 16058313 intron beat-Ia + chr2L_13_16055001 chr2L_16055001 RAL-508 412 chr2L 8578452 8578452 chr2L 16071771 16071771 6 7493319 15.0 20.5 17.8 0.3 7493319 chr2L 8578452 intron Sema-1a + chr2L 12325112 intergenic not near genes chr2L 16071771 intron beat-Ia + chr2L_6_12325001 chr2L_12325001 RAL-508 413 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 30 145889 21.0 32.0 26.5 1.1 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_30_16140001 chr2L_16140001 RAL-508 414 chr2L 16086664 16086703 chr2L 16086874 16086915 14 211 5.0 7.0 6.0 2.0 251 chr2L 16086664 intergenic not near genes chr2L 16086790 intergenic not near genes chr2L 16086915 intergenic not near genes chr2L_14_16085001 chr2L_16085001 RAL-508 415 chr2L 16134597 16134646 chr2L 16134716 16134763 14 118 2.0 3.5 2.8 3.7 166 chr2L 16134597 intergenic CG34168 -,CG4892 + chr2L 16134680 intergenic CG34168 -,CG4892 + chr2L 16134763 3` UTR CG34168 - chr2L_14_16130001 chr2L_16130001 RAL-508 416 chr2L 16137159 16137173 chr2L 16137681 16137694 5 522 0.5 3.0 1.8 1.8 535 chr2L 16137159 intergenic not near genes chr2L 16137426 intergenic not near genes chr2L 16137694 intergenic not near genes chr2L_5_16135001 chr2L_16135001 RAL-508 417 chr2L 16141151 16141172 chr2L 16146373 16146399 copia 5 5226 4.5 2.5 3.5 1.1 5248 chr2L 16141151 intergenic not near genes chr2L 16143775 intergenic not near genes chr2L 16146399 intergenic not near genes chr2L_5_16140001 chr2L_16140001 RAL-508 418 chr2L 16153721 16153744 chr2L 16160795 16160818 297 11 7074 8.0 4.0 6.0 1.6 7097 chr2L 16153721 intergenic not near genes chr2L 16157270 intergenic not near genes chr2L 16160818 intergenic not near genes chr2L_11_16155001 chr2L_16155001 RAL-508 419 chr2L 9084336 9084340 chr2L 16217660 16217660 8 7133322 16.0 32.0 24.0 0.3 7133324 chr2L 9084336 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_8_12650001 chr2L_12650001 RAL-508 420 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 20 145889 21.0 32.0 26.5 0.7 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_20_16140001 chr2L_16140001 RAL-508 421 chr2L 16242056 16242088 chr2L 16242168 16242200 5 112 2.0 0.0 1.0 2.5 144 chr2L 16242056 5` UTR CG42818 + chr2L 16242128 exon CG42818 + chr2L 16242200 exon CG42818 + chr2L_5_16240001 chr2L_16240001 RAL-508 422 chr2L 16243204 16243373 chr2L 16243301 16243473 17 98 2.0 2.0 2.0 5.7 269 chr2L 16243204 exon CG42818 + chr2L 16243338 exon CG42818 + chr2L 16243473 exon CG42818 + chr2L_17_16240001 chr2L_16240001 RAL-508 423 chr2L 16254871 16254912 chr2L 16255150 16255186 12 278 3.0 4.5 3.8 2.5 315 chr2L 16254871 intron PRL-1 - chr2L 16255028 intron PRL-1 - chr2L 16255186 intron PRL-1 - chr2L_12_16255001 chr2L_16255001 RAL-508 424 chr2L 16263967 16264020 chr2L 16264078 16264130 14 109 2.0 1.5 1.8 5.0 163 chr2L 16263967 3` UTR crp - chr2L 16264048 3` UTR crp - chr2L 16264130 3` UTR crp - chr2L_14_16260001 chr2L_16260001 RAL-508 425 chr2L 16280235 16280279 chr2L 16281426 16281469 1360 12 1184 4.0 3.0 3.5 2.7 1234 chr2L 16280235 intron crp - chr2L 16280852 intron crp - chr2L 16281469 intron crp - chr2L_12_16280001 chr2L_16280001 RAL-508 426 chr2L 16354767 16354786 chr2L 16354879 16354898 8 110 1.0 5.5 3.2 1.9 131 chr2L 16354767 intergenic CaBP1 -,CG4455 + chr2L 16354832 intergenic CaBP1 -,CG4455 + chr2L 16354898 3` UTR CaBP1 - chr2L_8_16350001 chr2L_16350001 RAL-508 427 chr2L 16363922 16363969 chr2L 16364188 16364235 6 266 0.0 3.5 1.8 2.1 313 chr2L 16363922 intergenic not near genes chr2L 16364078 intergenic not near genes chr2L 16364235 intergenic not near genes chr2L_6_16360001 chr2L_16360001 RAL-508 428 chr2L 16384763 16384795 chr2L 16384860 16384889 9 95 8.5 0.0 4.2 1.7 126 chr2L 16384763 intergenic not near genes chr2L 16384826 intergenic not near genes chr2L 16384889 intergenic not near genes chr2L_9_16380001 chr2L_16380001 RAL-508 429 chr2L 16432589 16432612 chr2L 16432706 16432728 5 117 0.0 2.0 1.0 2.5 139 chr2L 16432589 intron CG5888 - chr2L 16432658 intron CG5888 - chr2L 16432728 intron CG5888 - chr2L_5_16430001 chr2L_16430001 RAL-508 430 chr2L 16450410 16450457 chr2L 16450509 16450556 21 97 4.5 1.5 3.0 5.2 146 chr2L 16450410 exon Idgf2 + chr2L 16450483 3` UTR Idgf2 + chr2L 16450556 intergenic Idgf2 + chr2L_21_16450001 chr2L_16450001 RAL-508 431 chr2L 16504988 16505017 chr2L 16505106 16505147 7 128 0.0 3.0 1.5 2.8 159 chr2L 16504988 intron Tpr2 + chr2L 16505068 intron Tpr2 + chr2L 16505147 intron Tpr2 + chr2L_7_16505001 chr2L_16505001 RAL-508 432 chr2L 16511944 16511976 chr2L 16519078 16519109 HMS-Beagle 5 7134 2.5 1.0 1.8 1.8 7165 chr2L 16511944 intron CG5953 - chr2L 16515526 intron CG5953 - chr2L 16519109 intron CG5953 - chr2L_5_16515001 chr2L_16515001 RAL-508 433 chr2L 16572195 16572243 chr2L 16572307 16572358 15 109 4.0 2.5 3.2 3.6 163 chr2L 16572195 intron CG42389 + chr2L 16572276 intron CG42389 + chr2L 16572358 intron CG42389 + chr2L_15_16570001 chr2L_16570001 RAL-508 434 chr2L 16573489 16573524 chr2L 16577866 16577901 8 4377 22.5 8.0 15.2 0.5 4412 chr2L 16573489 intron CG42389 + chr2L 16575695 intron CG42389 + chr2L 16577901 intron CG42389 + chr2L_8_16575001 chr2L_16575001 RAL-508 435 chr2L 16572685 16572733 chr2L 16578660 16578708 11 5979 39.5 3.0 21.2 0.5 6023 chr2L 16572685 intron CG42389 + chr2L 16575696 intron CG42389 + chr2L 16578708 intron CG42389 + chr2L_11_16575001 chr2L_16575001 RAL-508 436 chr2L 16764952 16764999 chr2L 16765052 16765099 7 100 2.5 3.5 3.0 1.8 147 chr2L 16764952 intergenic not near genes chr2L 16765026 intergenic not near genes chr2L 16765099 intergenic not near genes chr2L_7_16765001 chr2L_16765001 RAL-508 437 chr2L 16873236 16873271 chr2L 16873340 16873363 7 102 4.5 0.5 2.5 2.0 127 chr2L 16873236 intron CR31781 + chr2L 16873300 intron CR31781 + chr2L 16873363 intron CR31781 + chr2L_7_16870001 chr2L_16870001 RAL-508 438 chr2L 16958089 16958127 chr2L 16962897 16962935 Doc 9 4808 2.5 5.0 3.8 1.9 4846 chr2L 16958089 intergenic not near genes chr2L 16960512 intergenic not near genes chr2L 16962935 intergenic not near genes chr2L_9_16960001 chr2L_16960001 RAL-508 439 chr2L 17000098 17000152 chr2L 17000240 17000279 22 140 3.5 3.0 3.2 5.2 181 chr2L 17000098 intergenic not near genes chr2L 17000188 intergenic not near genes chr2L 17000279 intergenic not near genes chr2L_22_17000001 chr2L_17000001 RAL-508 440 chr2L 17032484 17032516 chr2L 17032588 17032621 4 105 2.5 3.5 3.0 1.0 137 chr2L 17032484 intergenic not near genes chr2L 17032552 intergenic not near genes chr2L 17032621 intergenic not near genes chr2L_4_17030001 chr2L_17030001 RAL-508 441 chr2L 17053261 17053309 chr2L 17053691 17053739 7 430 1.0 3.5 2.2 2.2 478 chr2L 17053261 intergenic not near genes chr2L 17053500 intergenic not near genes chr2L 17053739 intergenic not near genes chr2L_7_17050001 chr2L_17050001 RAL-508 442 chr2L 17118683 17118713 chr2L 17118788 17118794 9 103 0.5 4.0 2.2 2.8 111 chr2L 17118683 intergenic not near genes chr2L 17118738 intergenic not near genes chr2L 17118794 intergenic not near genes chr2L_9_17115001 chr2L_17115001 RAL-508 443 chr2L 17122770 17122789 chr2L 17122869 17122894 4 102 4.0 4.0 4.0 0.8 124 chr2L 17122770 intergenic not near genes chr2L 17122832 intergenic CG31784 - chr2L 17122894 intergenic CG31784 - chr2L_4_17120001 chr2L_17120001 RAL-508 444 chr2L 17122801 17122809 chr2L 17122863 17122914 5 96 2.0 4.0 3.0 1.2 113 chr2L 17122801 intergenic not near genes chr2L 17122858 intergenic CG31784 - chr2L 17122914 intergenic CG31784 - chr2L_5_17120001 chr2L_17120001 RAL-508 445 chr2L 17167548 17167595 chr2L 17167809 17167856 pogo 12 257 4.0 2.5 3.2 2.9 308 chr2L 17167548 intron,intron CG34106 +,beat-IIIa + chr2L 17167702 intron,intron CG34106 +,beat-IIIa + chr2L 17167856 intron,intron CG34106 +,beat-IIIa + chr2L_12_17165001 chr2L_17165001 RAL-508 446 chr2L 17199140 17199159 chr2L 17200627 17200645 hobo 6 1485 8.0 3.0 5.5 0.9 1505 chr2L 17199140 intron beat-IIIc - chr2L 17199892 intron beat-IIIc - chr2L 17200645 intron beat-IIIc - chr2L_6_17195001 chr2L_17195001 RAL-508 447 chr2L 17199163 17199185 chr2L 17200625 17200668 hobo 7 1483 4.5 3.0 3.8 1.5 1505 chr2L 17199163 intron beat-IIIc - chr2L 17199916 intron beat-IIIc - chr2L 17200668 intron beat-IIIc - chr2L_7_17195001 chr2L_17195001 RAL-508 448 chr2L 17226078 17226127 chr2L 17226177 17226218 10 98 5.0 4.0 4.5 1.8 140 chr2L 17226078 intron beat-IIIc - chr2L 17226148 intron beat-IIIc - chr2L 17226218 intron beat-IIIc - chr2L_10_17225001 chr2L_17225001 RAL-508 449 chr2L 17264723 17264778 chr2L 17264822 17264868 11 98 1.5 2.5 2.0 3.7 145 chr2L 17264723 intergenic not near genes chr2L 17264796 intergenic not near genes chr2L 17264868 intergenic not near genes chr2L_11_17260001 chr2L_17260001 RAL-508 450 chr2L 17273181 17273216 chr2L 17277971 17278019 F-element 6 4801 3.5 5.5 4.5 1.1 4838 chr2L 17273181 intergenic not near genes chr2L 17275600 intergenic not near genes chr2L 17278019 intergenic not near genes chr2L_6_17275001 chr2L_17275001 RAL-508 451 chr2L 17292864 17292903 chr2L 17292962 17293001 5 96 5.5 3.5 4.5 0.9 137 chr2L 17292864 intergenic not near genes chr2L 17292932 intergenic not near genes chr2L 17293001 intergenic not near genes chr2L_5_17290001 chr2L_17290001 RAL-508 452 chr2L 17294256 17294303 chr2L 17294544 17294591 7 290 5.5 4.5 5.0 1.2 335 chr2L 17294256 intergenic not near genes chr2L 17294424 intergenic not near genes chr2L 17294591 intergenic not near genes chr2L_7_17290001 chr2L_17290001 RAL-508 453 chr2L 17319120 17319125 chr2L 17319202 17319203 4 85 5.0 6.0 5.5 0.6 83 chr2L 17319120 3` UTR CR45696 - chr2L 17319162 3` UTR CR45696 - chr2L 17319203 3` UTR CR45696 - chr2L_4_17315001 chr2L_17315001 RAL-508 454 chr2L 17327900 17327928 chr2L 17328000 17328034 14 104 6.5 8.5 7.5 1.6 134 chr2L 17327900 intergenic not near genes chr2L 17327967 intergenic not near genes chr2L 17328034 intergenic not near genes chr2L_14_17325001 chr2L_17325001 RAL-508 455 chr2L 17360002 17360046 chr2L 17360200 17360244 7 197 3.5 0.0 1.8 2.5 242 chr2L 17360002 intergenic not near genes chr2L 17360123 intergenic not near genes chr2L 17360244 intergenic not near genes chr2L_7_17360001 chr2L_17360001 RAL-508 456 chr2L 17380438 17380482 chr2L 17380728 17380772 15 288 1.5 2.5 2.0 5.0 334 chr2L 17380438 intron Lrch - chr2L 17380605 intron Lrch - chr2L 17380772 intron Lrch - chr2L_15_17380001 chr2L_17380001 RAL-508 457 chr2L 17432014 17432041 chr2L 17432141 17432167 1360 7 127 0.0 1.5 0.8 3.9 153 chr2L 17432014 intron Dif - chr2L 17432090 intron Dif - chr2L 17432167 intron Dif - chr2L_7_17430001 chr2L_17430001 RAL-508 458 chr2L 17466423 17466451 chr2L 17466528 17466564 10 110 1.0 6.5 3.8 2.1 141 chr2L 17466423 intron BicD - chr2L 17466494 intron BicD - chr2L 17466564 intron BicD - chr2L_10_17465001 chr2L_17465001 RAL-508 459 chr2L 7134598 7134602 chr2L 17564107 17564107 4 10429506 6.5 7.5 7.0 0.5 10429509 chr2L 7134598 intron Pvf3 - chr2L 12349352 intron bru-2 + chr2L 17564107 intergenic not near genes chr2L_4_12345001 chr2L_12345001 RAL-508 460 chr2L 17571148 17571156 chr2L 17571250 17571259 4 103 0.0 5.5 2.8 1.1 111 chr2L 17571148 intergenic not near genes chr2L 17571204 intergenic not near genes chr2L 17571259 intergenic not near genes chr2L_4_17570001 chr2L_17570001 RAL-508 461 chr2L 17578252 17578283 chr2L 17578417 17578424 14 160 8.5 3.0 5.8 2.1 172 chr2L 17578252 intergenic not near genes chr2L 17578338 intergenic not near genes chr2L 17578424 intergenic not near genes chr2L_14_17575001 chr2L_17575001 RAL-508 462 chr2L 17613435 17613487 chr2L 17613652 17613704 13 217 4.5 2.5 3.5 2.9 269 chr2L 17613435 intergenic not near genes chr2L 17613570 intergenic not near genes chr2L 17613704 intergenic not near genes chr2L_13_17610001 chr2L_17610001 RAL-508 463 chr2L 17687508 17687522 chr2L 17692273 17692287 F-element 8 4765 2.5 4.5 3.5 1.8 4779 chr2L 17687508 intron CadN - chr2L 17689898 intron CadN - chr2L 17692287 intron CadN - chr2L_8_17685001 chr2L_17685001 RAL-508 464 chr2L 17723773 17723797 chr2L 17723885 17723910 8 113 1.0 2.5 1.8 2.9 137 chr2L 17723773 intron CadN - chr2L 17723842 intron CadN - chr2L 17723910 intron CadN - chr2L_8_17720001 chr2L_17720001 RAL-508 465 chr2L 17727859 17727872 chr2L 17729346 17729359 hobo 4 1484 6.0 8.0 7.0 0.5 1500 chr2L 17727859 intron CadN - chr2L 17728609 intron CadN - chr2L 17729359 intron CadN - chr2L_4_17725001 chr2L_17725001 RAL-508 466 chr2L 17819915 17819951 chr2L 17825138 17825174 copia 15 5222 4.0 4.0 4.0 3.0 5259 chr2L 17819915 intron CadN2 - chr2L 17822544 intron CadN2 - chr2L 17825174 intron CadN2 - chr2L_15_17820001 chr2L_17820001 RAL-508 467 chr2L 17855480 17855524 chr2L 17855577 17855622 13 98 4.5 5.5 5.0 2.2 142 chr2L 17855480 intron CadN2 - chr2L 17855551 intron CadN2 - chr2L 17855622 intron CadN2 - chr2L_13_17855001 chr2L_17855001 RAL-508 468 chr2L 17869800 17869835 chr2L 17869906 17869932 5 103 3.0 9.0 6.0 0.7 132 chr2L 17869800 intron CadN2 - chr2L 17869866 intron CadN2 - chr2L 17869932 intron CadN2 - chr2L_5_17865001 chr2L_17865001 RAL-508 469 chr2L 17893367 17893414 chr2L 17894099 17894101 15 729 1.5 2.0 1.8 5.4 734 chr2L 17893367 intergenic CR43420 + chr2L 17893734 intergenic CR43420 + chr2L 17894101 5` UTR CR43420 + chr2L_15_17890001 chr2L_17890001 RAL-508 470 chr2L 17911959 17911982 chr2L 17914139 17914158 pogo 6 2190 3.5 5.0 4.2 1.2 2199 chr2L 17911959 intergenic not near genes chr2L 17913058 intergenic not near genes chr2L 17914158 intergenic CG43271 - chr2L_6_17910001 chr2L_17910001 RAL-508 471 chr2L 17951923 17951971 chr2L 17953410 17953458 hobo 20 1487 6.5 2.5 4.5 3.6 1535 chr2L 17951923 intergenic CR44398 -,CR44397 - chr2L 17952690 intergenic not near genes chr2L 17953458 intergenic not near genes chr2L_20_17950001 chr2L_17950001 RAL-508 472 chr2L 17987317 17987348 chr2L 17991501 17991532 13 4186 30.5 21.0 25.8 0.5 4215 chr2L 17987317 exon CG5681 + chr2L 17989424 intergenic not near genes chr2L 17991532 3` UTR Prosbeta5R2 + chr2L_13_17985001 chr2L_17985001 RAL-508 473 chr2L 18051865 18051902 chr2L 18061030 18061069 roo 11 9160 6.0 8.0 7.0 1.4 9204 chr2L 18051865 intron rdo + chr2L 18056467 intron rdo + chr2L 18061069 intron rdo + chr2L_11_18055001 chr2L_18055001 RAL-508 474 chr2L 18095575 18095588 chr2L 18095676 18095689 4 101 6.5 1.5 4.0 0.8 114 chr2L 18095575 intergenic not near genes chr2L 18095632 intergenic not near genes chr2L 18095689 intergenic not near genes chr2L_4_18095001 chr2L_18095001 RAL-508 475 chr2L 18111222 18111243 chr2L 18111333 18111352 11 111 7.5 6.0 6.8 1.4 130 chr2L 18111222 intergenic not near genes chr2L 18111287 intergenic not near genes chr2L 18111352 intergenic not near genes chr2L_11_18110001 chr2L_18110001 RAL-508 476 chr2L 18254795 18254834 chr2L 18254915 18254926 11 117 1.0 4.0 2.5 3.1 131 chr2L 18254795 intron CG42750 - chr2L 18254860 intron CG42750 - chr2L 18254926 intron CG42750 - chr2L_11_18250001 chr2L_18250001 RAL-508 477 chr2L 18264042 18264083 chr2L 18264139 18264180 11 97 2.5 3.5 3.0 2.8 138 chr2L 18264042 intron CG42750 - chr2L 18264111 intron CG42750 - chr2L 18264180 intron CG42750 - chr2L_11_18260001 chr2L_18260001 RAL-508 478 chr2L 18274020 18274068 chr2L 18274126 18274174 15 106 9.0 5.0 7.0 1.9 154 chr2L 18274020 intron CG42750 - chr2L 18274097 intron CG42750 - chr2L 18274174 intron CG42750 - chr2L_15_18270001 chr2L_18270001 RAL-508 479 chr2L 18303960 18304007 chr2L 18304071 18304118 9 107 3.0 2.0 2.5 2.6 158 chr2L 18303960 intergenic not near genes chr2L 18304039 intergenic not near genes chr2L 18304118 intergenic not near genes chr2L_9_18300001 chr2L_18300001 RAL-508 480 chr2L 16217660 16217660 chr2L 18331928 18331928 F-element 4 2114268 30.0 1.5 15.8 0.2 2114268 chr2L 16217660 intergenic not near genes chr2L 17274794 intergenic not near genes chr2L 18331928 intron Fas3 + chr2L_4_17270001 chr2L_17270001 RAL-508 481 chr2L 18334594 18334639 chr2L 18334699 18334728 12 102 3.5 4.0 3.8 2.5 134 chr2L 18334594 intron Fas3 + chr2L 18334661 intron Fas3 + chr2L 18334728 intron Fas3 + chr2L_12_18330001 chr2L_18330001 RAL-508 482 chr2L 18408013 18408035 chr2L 18412815 18412839 Doc 12 4803 4.0 0.0 2.0 4.0 4826 chr2L 18408013 intergenic not near genes chr2L 18410426 intergenic not near genes chr2L 18412839 intergenic not near genes chr2L_12_18410001 chr2L_18410001 RAL-508 483 chr2L 18538557 18538594 chr2L 18538659 18538676 5 97 0.0 3.5 1.8 1.8 119 chr2L 18538557 intron Pde11 - chr2L 18538616 intron Pde11 - chr2L 18538676 intron Pde11 - chr2L_5_18535001 chr2L_18535001 RAL-508 484 chr2L 16217660 16217660 chr2L 18622718 18622719 4 2405058 30.0 21.5 25.8 0.1 2405059 chr2L 16217660 intergenic not near genes chr2L 17420190 intron Dif - chr2L 18622719 intron MESR3 + chr2L_4_17420001 chr2L_17420001 RAL-508 485 chr2L 18664560 18664613 chr2L 18664656 18664685 16 91 4.0 4.5 4.2 3.1 125 chr2L 18664560 intergenic not near genes chr2L 18664622 intergenic not near genes chr2L 18664685 intergenic not near genes chr2L_16_18660001 chr2L_18660001 RAL-508 486 chr2L 18811418 18811433 chr2L 18811520 18811535 4 102 4.0 1.0 2.5 1.1 117 chr2L 18811418 intergenic CG10570 -,CG42502 - chr2L 18811476 intergenic CG10570 -,CG42502 - chr2L 18811535 intergenic not near genes chr2L_4_18810001 chr2L_18810001 RAL-508 487 chr2L 18812537 18812583 chr2L 18812819 18812853 9 281 1.0 4.5 2.8 2.4 316 chr2L 18812537 intergenic CG17325 +,CG42305 + chr2L 18812695 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812853 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_9_18810001 chr2L_18810001 RAL-508 488 chr2L 18898381 18898391 chr2L 18898482 18898493 6 100 7.0 0.0 3.5 1.3 112 chr2L 18898381 intergenic not near genes chr2L 18898437 intergenic not near genes chr2L 18898493 intergenic not near genes chr2L_6_18895001 chr2L_18895001 RAL-508 489 chr2L 18898394 18898420 chr2L 18898480 18898522 9 98 6.0 0.0 3.0 2.2 128 chr2L 18898394 intergenic not near genes chr2L 18898458 intergenic not near genes chr2L 18898522 intergenic not near genes chr2L_9_18895001 chr2L_18895001 RAL-508 490 chr2L 18926568 18926589 chr2L 18926695 18926710 5 125 4.5 4.5 4.5 0.9 142 chr2L 18926568 intron ssp3 - chr2L 18926639 intron ssp3 - chr2L 18926710 intron ssp3 - chr2L_5_18925001 chr2L_18925001 RAL-508 491 chr2L 19016225 19016270 chr2L 19016341 19016386 5 111 3.5 0.5 2.0 1.7 161 chr2L 19016225 intergenic not near genes chr2L 19016306 intergenic not near genes chr2L 19016386 intergenic not near genes chr2L_5_19015001 chr2L_19015001 RAL-508 492 chr2L 19024096 19024097 chr2L 21768291 21768291 4 2744194 5.5 25.0 15.2 0.2 2744195 chr2L 19024096 3` UTR CR43700 - chr2L 20396194 intron CG10947 - chr2L 21768291 intron CG31612 - chr2L_4_20395001 chr2L_20395001 RAL-508 493 chr2L 19122752 19122806 chr2L 19122851 19122885 14 96 2.5 3.0 2.8 3.7 133 chr2L 19122752 exon l(2)37Cc - chr2L 19122818 intron l(2)37Cc - chr2L 19122885 intron l(2)37Cc - chr2L_14_19120001 chr2L_19120001 RAL-508 494 chr2L 19147363 19147402 chr2L 19154406 19154412 297 10 7043 3.0 5.0 4.0 2.0 7049 chr2L 19147363 intron brat + chr2L 19150888 intron brat + chr2L 19154412 intron brat + chr2L_10_19150001 chr2L_19150001 RAL-508 495 chr2L 19237292 19237337 chr2L 19237411 19237451 9 116 3.0 5.5 4.2 1.7 159 chr2L 19237292 intergenic not near genes chr2L 19237372 intergenic not near genes chr2L 19237451 intergenic not near genes chr2L_9_19235001 chr2L_19235001 RAL-508 496 chr2L 19246813 19246852 chr2L 19246912 19246951 8 99 4.5 5.5 5.0 1.3 138 chr2L 19246813 intergenic not near genes chr2L 19246882 intergenic not near genes chr2L 19246951 intergenic not near genes chr2L_8_19245001 chr2L_19245001 RAL-508 497 chr2L 19256033 19256081 chr2L 19256236 19256284 15 203 38.0 9.0 23.5 0.6 251 chr2L 19256033 intergenic not near genes chr2L 19256158 intergenic not near genes chr2L 19256284 intergenic not near genes chr2L_15_19255001 chr2L_19255001 RAL-508 498 chr2L 19337980 19338030 chr2L 19338090 19338132 15 100 5.5 5.0 5.2 2.4 152 chr2L 19337980 intergenic not near genes chr2L 19338056 intergenic not near genes chr2L 19338132 intergenic not near genes chr2L_15_19335001 chr2L_19335001 RAL-508 499 chr2L 19345007 19345039 chr2L 19357236 19357268 blood 9 12227 5.0 7.5 6.2 1.2 12261 chr2L 19345007 intron dnt - chr2L 19351138 intron dnt - chr2L 19357268 intron dnt - chr2L_9_19350001 chr2L_19350001 RAL-508 500 chr2L 19357534 19357565 chr2L 19357636 19357674 15 105 6.0 7.5 6.8 1.9 140 chr2L 19357534 intron dnt - chr2L 19357604 intron dnt - chr2L 19357674 intron dnt - chr2L_15_19355001 chr2L_19355001 RAL-508 501 chr2L 19405601 19405642 chr2L 19405711 19405744 10 107 0.5 0.5 0.5 6.7 143 chr2L 19405601 intron Pax - chr2L 19405672 intron Pax - chr2L 19405744 intron Pax - chr2L_10_19405001 chr2L_19405001 RAL-508 502 chr2L 19441047 19441085 chr2L 19441144 19441180 13 96 6.5 4.5 5.5 2.0 133 chr2L 19441047 intron CG10237 - chr2L 19441114 intron CG10237 - chr2L 19441180 5` UTR CG10237 - chr2L_13_19440001 chr2L_19440001 RAL-508 503 chr2L 19558499 19558505 chr2L 19558623 19558629 4 124 2.0 4.5 3.2 1.0 130 chr2L 19558499 intron Tep5 + chr2L 19558564 intron Tep5 + chr2L 19558629 intron Tep5 + chr2L_4_19555001 chr2L_19555001 RAL-508 504 chr2L 19558507 19558546 chr2L 19558622 19558670 16 122 2.0 4.0 3.0 4.0 163 chr2L 19558507 intron Tep5 + chr2L 19558588 intron Tep5 + chr2L 19558670 intron Tep5 + chr2L_16_19555001 chr2L_19555001 RAL-508 505 chr2L 19560817 19560853 chr2L 19560917 19560953 10 100 5.0 0.0 2.5 2.9 136 chr2L 19560817 exon Tep5 + chr2L 19560885 exon Tep5 + chr2L 19560953 exon Tep5 + chr2L_10_19560001 chr2L_19560001 RAL-508 506 chr2L 19562508 19562560 chr2L 19562609 19562660 8 89 0.0 3.0 1.5 3.2 152 chr2L 19562508 exon Tep5 + chr2L 19562584 intron Tep5 + chr2L 19562660 exon Tep5 + chr2L_8_19560001 chr2L_19560001 RAL-508 507 chr2L 19608588 19608611 chr2L 19608699 19608719 8 110 4.5 6.0 5.2 1.3 131 chr2L 19608588 intron Lar + chr2L 19608654 intron Lar + chr2L 19608719 intron Lar + chr2L_8_19605001 chr2L_19605001 RAL-508 508 chr2L 19612961 19612985 chr2L 19613063 19613070 5 104 5.0 6.0 5.5 0.8 109 chr2L 19612961 intron Lar + chr2L 19613016 intron Lar + chr2L 19613070 intron Lar + chr2L_5_19610001 chr2L_19610001 RAL-508 509 chr2L 19620076 19620094 chr2L 19621085 19621103 jockey 4 1009 9.0 1.5 5.2 0.6 1027 chr2L 19620076 intron Lar + chr2L 19620590 intron Lar + chr2L 19621103 intron Lar + chr2L_4_19620001 chr2L_19620001 RAL-508 510 chr2L 19620097 19620120 chr2L 19621079 19621099 jockey 10 993 4.0 1.5 2.8 2.6 1002 chr2L 19620097 intron Lar + chr2L 19620598 intron Lar + chr2L 19621099 intron Lar + chr2L_10_19620001 chr2L_19620001 RAL-508 511 chr2L 19652556 19652570 chr2L 19674010 19674023 opus 5 21453 12.5 6.0 9.2 0.5 21467 chr2L 19652556 intron Lar + chr2L 19663290 intron Lar + chr2L 19674023 intron Lar + chr2L_5_19660001 chr2L_19660001 RAL-508 512 chr2L 19652571 19652601 chr2L 19674008 19674054 opus 10 21452 6.0 5.5 5.8 1.5 21483 chr2L 19652571 intron Lar + chr2L 19663312 intron Lar + chr2L 19674054 intron Lar + chr2L_10_19660001 chr2L_19660001 RAL-508 513 chr2L 19703520 19703564 chr2L 19712675 19712720 roo 16 9153 5.0 5.0 5.0 2.7 9200 chr2L 19703520 intron Lar + chr2L 19708120 intron Lar + chr2L 19712720 intron Lar + chr2L_16_19705001 chr2L_19705001 RAL-508 514 chr2L 19718497 19718520 chr2L 19718624 19718647 6 125 4.0 6.5 5.2 1.0 150 chr2L 19718497 intron Lar + chr2L 19718572 intron Lar + chr2L 19718647 intron Lar + chr2L_6_19715001 chr2L_19715001 RAL-508 515 chr2L 19762791 19762824 chr2L 19763053 19763086 pogo 4 261 2.0 3.0 2.5 1.1 295 chr2L 19762791 5` UTR fbp - chr2L 19762938 intron fbp - chr2L 19763086 intron fbp - chr2L_4_19760001 chr2L_19760001 RAL-508 516 chr2L 19837257 19837303 chr2L 19837357 19837402 17 99 5.5 3.5 4.5 3.1 145 chr2L 19837257 intron sick + chr2L 19837330 intron sick + chr2L 19837402 intron sick + chr2L_17_19835001 chr2L_19835001 RAL-508 517 chr2L 20005856 20005897 chr2L 20010952 20010990 flea 5 5095 3.0 4.0 3.5 1.1 5134 chr2L 20005856 intron CG43861 - chr2L 20008423 intron CG43861 - chr2L 20010990 intron CG43861 - chr2L_5_20005001 chr2L_20005001 RAL-508 518 chr2L 20041413 20041459 chr2L 20041518 20041563 13 102 5.0 4.0 4.5 2.4 150 chr2L 20041413 intron sNPF + chr2L 20041488 intron sNPF + chr2L 20041563 intron sNPF + chr2L_13_20040001 chr2L_20040001 RAL-508 519 chr2L 20079499 20079548 chr2L 20079640 20079687 7 140 1.0 0.0 0.5 4.7 188 chr2L 20079499 intron,intron neb +,fok - chr2L 20079593 intron,intron neb +,fok - chr2L 20079687 intron,intron neb +,fok - chr2L_7_20075001 chr2L_20075001 RAL-508 520 chr2L 20122617 20122645 chr2L 20122727 20122756 5 110 3.5 3.5 3.5 1.1 139 chr2L 20122617 intergenic not near genes chr2L 20122686 intergenic not near genes chr2L 20122756 intergenic not near genes chr2L_5_20120001 chr2L_20120001 RAL-508 521 chr2L 20272095 20272142 chr2L 20282826 20282873 copia 18 10730 5.0 5.0 5.0 3.0 10778 chr2L 20272095 intergenic not near genes chr2L 20277484 intergenic not near genes chr2L 20282873 intergenic not near genes chr2L_18_20275001 chr2L_20275001 RAL-508 522 chr2L 20296498 20296529 chr2L 20296589 20296630 7 99 1.5 2.5 2.0 2.3 132 chr2L 20296498 intergenic CR43414 - chr2L 20296564 intergenic CR43414 - chr2L 20296630 intergenic CR43414 - chr2L_7_20295001 chr2L_20295001 RAL-508 523 chr2L 20322617 20322665 chr2L 20322720 20322767 13 98 4.0 3.0 3.5 2.9 150 chr2L 20322617 intron spir + chr2L 20322692 intron spir + chr2L 20322767 intron spir + chr2L_13_20320001 chr2L_20320001 RAL-508 524 chr2L 20372209 20372246 chr2L 20372470 20372507 pogo 10 260 1.0 4.5 2.8 2.6 298 chr2L 20372209 intergenic Ugt37a1 - chr2L 20372358 intergenic Ugt37a1 - chr2L 20372507 exon Ugt37a1 - chr2L_10_20370001 chr2L_20370001 RAL-508 525 chr2L 20398354 20398363 chr2L 20398539 20398549 5 185 11.5 8.0 9.8 0.5 195 chr2L 20398354 intron CG10947 - chr2L 20398452 intron CG10947 - chr2L 20398549 intron CG10947 - chr2L_5_20395001 chr2L_20395001 RAL-508 526 chr2L 20398365 20398404 chr2L 20398536 20398550 16 181 7.0 7.5 7.2 2.0 185 chr2L 20398365 intron CG10947 - chr2L 20398458 intron CG10947 - chr2L 20398550 intron CG10947 - chr2L_16_20395001 chr2L_20395001 RAL-508 527 chr2L 20435914 20435955 chr2L 20436739 20436781 12 825 4.0 9.0 6.5 1.6 867 chr2L 20435914 intron CG31688 + chr2L 20436348 intron CG31688 + chr2L 20436781 intron CG31688 + chr2L_12_20435001 chr2L_20435001 RAL-508 528 chr2L 20498676 20498692 chr2L 20498795 20498811 4 119 7.0 4.5 5.8 0.6 135 chr2L 20498676 intergenic not near genes chr2L 20498744 intergenic not near genes chr2L 20498811 intergenic not near genes chr2L_4_20495001 chr2L_20495001 RAL-508 529 chr2L 20538050 20538101 chr2L 20538146 20538190 12 91 2.0 3.0 2.5 3.4 140 chr2L 20538050 intergenic not near genes chr2L 20538120 intergenic not near genes chr2L 20538190 intergenic not near genes chr2L_12_20535001 chr2L_20535001 RAL-508 530 chr2L 20568643 20568683 chr2L 20569053 20569084 X-element 15 409 4.5 4.0 4.2 2.9 441 chr2L 20568643 intron CR45347 + chr2L 20568864 intron CR45347 + chr2L 20569084 intron CR45347 + chr2L_15_20565001 chr2L_20565001 RAL-508 531 chr2L 20576199 20576246 chr2L 20583687 20583733 blood 11 7485 7.5 6.0 6.8 1.4 7534 chr2L 20576199 intergenic CR45347 + chr2L 20579966 intergenic not near genes chr2L 20583733 3` UTR CR44909 - chr2L_11_20575001 chr2L_20575001 RAL-508 532 chr2L 20588548 20588565 chr2L 20588631 20588669 4 92 4.5 2.0 3.2 1.0 121 chr2L 20588548 intron CR44909 - chr2L 20588608 intron CR44909 - chr2L 20588669 intron CR44909 - chr2L_4_20585001 chr2L_20585001 RAL-508 533 chr2L 20639482 20639532 chr2L 20639777 20639827 INE-1 12 291 1.5 1.5 1.5 4.8 345 chr2L 20639482 intergenic not near genes chr2L 20639654 intergenic CG31680 + chr2L 20639827 intergenic CG31680 + chr2L_12_20635001 chr2L_20635001 RAL-508 534 chr2L 20793042 20793112 chr2L 20793206 20793258 6 154 0.0 4.0 2.0 2.0 216 chr2L 20793042 intron vari - chr2L 20793150 intron vari - chr2L 20793258 intron vari - chr2L_6_20790001 chr2L_20790001 RAL-508 535 chr2L 20835817 20835835 chr2L 20836530 20836572 Quasimodo 6 731 2.5 4.0 3.2 1.4 755 chr2L 20835817 5` UTR Oseg5 - chr2L 20836194 intergenic Oseg5 -,Spn38F - chr2L 20836572 intergenic Spn38F - chr2L_6_20835001 chr2L_20835001 RAL-508 536 chr2L 20911016 20911061 chr2L 20911112 20911150 18 93 6.0 7.5 6.8 2.3 134 chr2L 20911016 intron,intron CG43739 -,sky - chr2L 20911083 intron,intron CG43739 -,sky - chr2L 20911150 intron,intron CG43739 -,sky - chr2L_18_20910001 chr2L_20910001 RAL-508 537 chr2L 20932404 20932447 chr2L 20934607 20934649 17 2203 55.0 28.0 41.5 0.4 2245 chr2L 20932404 exon CG9270 - chr2L 20933526 exon CG9270 - chr2L 20934649 intergenic not near genes chr2L_17_20930001 chr2L_20930001 RAL-508 538 chr2L 20939076 20939120 chr2L 20939174 20939218 8 98 3.0 1.5 2.2 2.5 142 chr2L 20939076 intergenic not near genes chr2L 20939147 intergenic not near genes chr2L 20939218 intergenic not near genes chr2L_8_20935001 chr2L_20935001 RAL-508 539 chr2L 20946928 20946962 chr2L 20947032 20947069 12 103 5.0 5.5 5.2 1.9 141 chr2L 20946928 intergenic CR44606 - chr2L 20946998 intergenic CR44606 - chr2L 20947069 intergenic CR44606 - chr2L_12_20945001 chr2L_20945001 RAL-508 540 chr2L 20961189 20961234 chr2L 20961299 20961344 15 109 3.0 6.5 4.8 2.6 155 chr2L 20961189 intergenic not near genes chr2L 20961266 intergenic not near genes chr2L 20961344 intergenic not near genes chr2L_15_20960001 chr2L_20960001 RAL-508 541 chr2L 20968294 20968337 chr2L 20968476 20968519 9 182 3.5 5.5 4.5 1.6 225 chr2L 20968294 intron CG42238 - chr2L 20968406 intron CG42238 - chr2L 20968519 intron CG42238 - chr2L_9_20965001 chr2L_20965001 RAL-508 542 chr2L 20976632 20976660 chr2L 20981467 20981490 X-element 11 4829 7.0 6.0 6.5 1.5 4858 chr2L 20976632 intron CG42238 - chr2L 20979061 intron CG42238 - chr2L 20981490 intron CG42238 - chr2L_11_20975001 chr2L_20975001 RAL-508 543 chr2L 20984718 20984772 chr2L 20984829 20984884 21 105 4.5 4.0 4.2 4.0 166 chr2L 20984718 intron CG42238 - chr2L 20984801 intron CG42238 - chr2L 20984884 intron CG42238 - chr2L_21_20980001 chr2L_20980001 RAL-508 544 chr2L 21020259 21020305 chr2L 21023956 21023983 NOF 14 3695 5.5 1.5 3.5 3.1 3724 chr2L 21020259 intron CG42238 - chr2L 21022121 intron CG42238 - chr2L 21023983 intron CG42238 - chr2L_14_21020001 chr2L_21020001 RAL-508 545 chr2L 21041117 21041162 chr2L 21049398 21049442 Tirant 9 8280 4.5 5.0 4.8 1.6 8325 chr2L 21041117 intron CG42238 - chr2L 21045280 intron CG42238 - chr2L 21049442 intron CG42238 - chr2L_9_21045001 chr2L_21045001 RAL-508 546 chr2L 2299697 2299742 chr2L 21110011 21110053 15 18810312 17.0 13.0 15.0 0.9 18810356 chr2L 2299697 intergenic CG31949 + chr2L 11704875 intergenic not near genes chr2L 21110053 intron Nhe2 + chr2L_15_11700001 chr2L_11700001 RAL-508 547 chr2L 21193332 21193371 chr2L 21193432 21193475 8 101 4.0 4.5 4.2 1.5 143 chr2L 21193332 intron Ret - chr2L 21193404 intron Ret - chr2L 21193475 intron Ret - chr2L_8_21190001 chr2L_21190001 RAL-508 548 chr2L 21222211 21222254 chr2L 21222331 21222366 20 120 1.0 5.5 3.2 4.8 155 chr2L 21222211 intron CG8677 + chr2L 21222288 intron CG8677 + chr2L 21222366 intron CG8677 + chr2L_20_21220001 chr2L_21220001 RAL-508 549 chr2L 21286585 21286621 chr2L 21286683 21286719 8 98 4.0 1.5 2.8 2.1 134 chr2L 21286585 exon Mio - chr2L 21286652 intron Mio - chr2L 21286719 intron Mio - chr2L_8_21285001 chr2L_21285001 RAL-508 550 chr2L 21377384 21377424 chr2L 21377481 21377521 9 96 4.0 4.5 4.2 1.7 137 chr2L 21377384 3` UTR CG8665 + chr2L 21377452 3` UTR CG8665 + chr2L 21377521 3` UTR CG8665 + chr2L_9_21375001 chr2L_21375001 RAL-508 551 chr2L 21597034 21597060 chr2L 21604798 21604824 roo 11 7763 2.0 9.5 5.8 1.6 7790 chr2L 21597034 intergenic not near genes chr2L 21600929 intergenic not near genes chr2L 21604824 intergenic not near genes chr2L_11_21600001 chr2L_21600001 RAL-508 552 chr2L 21653179 21653221 chr2L 21656495 21656544 invader4 7 3322 4.0 4.0 4.0 1.4 3365 chr2L 21653179 intergenic not near genes chr2L 21654862 intergenic not near genes chr2L 21656544 intergenic not near genes chr2L_7_21650001 chr2L_21650001 RAL-508 553 chr2L 21771207 21771253 chr2L 21771334 21771380 19 125 4.5 5.0 4.8 3.3 173 chr2L 21771207 intron CG31612 - chr2L 21771294 intron CG31612 - chr2L 21771380 intron CG31612 - chr2L_19_21770001 chr2L_21770001 RAL-508 554 chr2L 21771964 21772011 chr2L 21772063 21772110 13 97 3.5 3.0 3.2 3.1 146 chr2L 21771964 intron CG31612 - chr2L 21772037 intron CG31612 - chr2L 21772110 intron CG31612 - chr2L_13_21770001 chr2L_21770001 RAL-508 555 chr2L 21819313 21819356 chr2L 21819415 21819464 11 101 4.5 2.0 3.2 2.6 151 chr2L 21819313 intergenic CR44786 + chr2L 21819388 intergenic CR44786 + chr2L 21819464 intergenic CR44786 + chr2L_11_21815001 chr2L_21815001 RAL-508 556 chr2L 21855458 21855513 chr2L 21855564 21855587 8 102 2.5 2.5 2.5 2.3 129 chr2L 21855458 intron CR44917 + chr2L 21855522 intron CR44917 + chr2L 21855587 intron CR44917 + chr2L_8_21855001 chr2L_21855001 RAL-508 557 chr2L 21882560 21882610 chr2L 21882662 21882711 8 101 3.0 1.0 2.0 2.7 151 chr2L 21882560 intergenic not near genes chr2L 21882636 intergenic not near genes chr2L 21882711 intergenic not near genes chr2L_8_21880001 chr2L_21880001 RAL-508 558 chr2L 21981672 21981698 chr2L 21990857 21990871 roo 9 9181 5.0 9.0 7.0 1.1 9199 chr2L 21981672 exon CG2528 - chr2L 21986272 intron CG2528 - chr2L 21990871 exon CG2528 - chr2L_9_21985001 chr2L_21985001 RAL-508 559 chr2L 21994870 21994908 chr2L 21994966 21995003 8 94 2.5 1.0 1.8 2.9 133 chr2L 21994870 intergenic not near genes chr2L 21994936 intergenic not near genes chr2L 21995003 intergenic not near genes chr2L_8_21990001 chr2L_21990001 RAL-508 560 chr2L 21996921 21996953 chr2L 21997022 21997054 11 100 1.0 1.5 1.2 5.0 133 chr2L 21996921 intergenic not near genes chr2L 21996988 intergenic not near genes chr2L 21997054 intergenic not near genes chr2L_11_21995001 chr2L_21995001 RAL-508 561 chr2L 22545977 22546011 chr2L 22546075 22546108 10 102 5.5 1.0 3.2 2.4 131 chr2L 22545977 intron CG17490 + chr2L 22546042 intron CG17490 + chr2L 22546108 intron CG17490 + chr2L_10_22545001 chr2L_22545001 RAL-508 562 chr2L 22548922 22548944 chr2L 22550166 22550189 1360 10 1244 0.5 12.5 6.5 1.3 1267 chr2L 22548922 intergenic CG17490 + chr2L 22549556 intergenic not near genes chr2L 22550189 intergenic CG17493 + chr2L_10_22545001 chr2L_22545001 RAL-508 563 chr2L 22581958 22581989 chr2L 22583766 22583798 S-element 4 1809 5.0 3.0 4.0 0.8 1840 chr2L 22581958 intron CG17494 + chr2L 22582878 intron CG17494 + chr2L 22583798 intron CG17494 + chr2L_4_22580001 chr2L_22580001 RAL-508 564 chr2L 22676110 22676156 chr2L 22676368 22676414 5 257 2.5 3.5 3.0 1.2 304 chr2L 22676110 intron CG40006 - chr2L 22676262 intron CG40006 - chr2L 22676414 intron CG40006 - chr2L_5_22675001 chr2L_22675001 RAL-508 565 chr2L 22679803 22679821 chr2L 22684576 22684613 F-element 7 4786 1.5 6.5 4.0 1.4 4810 chr2L 22679803 intron CG40006 - chr2L 22682208 intron CG40006 - chr2L 22684613 intron CG40006 - chr2L_7_22680001 chr2L_22680001 RAL-508 566 chr2L 22693917 22693949 chr2L 22694008 22694056 9 100 0.5 4.5 2.5 2.6 139 chr2L 22693917 intron CG40006 - chr2L 22693986 intron CG40006 - chr2L 22694056 intron CG40006 - chr2L_9_22690001 chr2L_22690001 RAL-508 567 chr2L 22776403 22776439 chr2L 22778212 22778248 S-element 9 1809 3.0 1.0 2.0 3.0 1845 chr2L 22776403 intergenic not near genes chr2L 22777326 intergenic not near genes chr2L 22778248 intergenic not near genes chr2L_9_22775001 chr2L_22775001 RAL-508 568 chr2L 22983935 22983967 chr2L 22984031 22984062 6 95 2.0 5.0 3.5 1.3 127 chr2L 22983935 intron cta + chr2L 22983998 intron cta + chr2L 22984062 intron cta + chr2L_6_22980001 chr2L_22980001 RAL-508 569 chr2R 529315 529337 chr2R 537957 537981 Max-element 8 8644 9.0 12.0 10.5 0.7 8666 chr2R 529315 intron CG40378 + chr2R 533648 intron CG40378 + chr2R 537981 intron CG40378 + chr2R_8_530001 chr2R_530001 RAL-508 570 chr2R 1072740 1072784 chr2R 1075065 1075109 Cr1a 8 2325 31.5 7.5 19.5 0.4 2369 chr2R 1072740 intron rl + chr2R 1073924 intron rl + chr2R 1075109 intron rl + chr2R_8_1070001 chr2R_1070001 RAL-508 571 chr2R 1320204 1320204 chr2R 21358403 21358403 4 20038199 14.5 7.0 10.8 0.3 20038199 chr2R 1320204 intergenic not near genes chr2R 11339304 exon zetaTry - chr2R 21358403 intron cv-2 - chr2R_4_11335001 chr2R_11335001 RAL-508 572 chr2R 1516586 1516597 chr2R 1521334 1521345 1731 11 4748 26.0 8.5 17.2 0.6 4759 chr2R 1516586 exon Maf1 - chr2R 1518966 intron Maf1 - chr2R 1521345 5` UTR Maf1 - chr2R_11_1515001 chr2R_1515001 RAL-508 573 chr2R 2015114 2015160 chr2R 2015211 2015257 9 96 3.5 3.5 3.5 2.0 143 chr2R 2015114 intron CG17684 - chr2R 2015186 intron CG17684 - chr2R 2015257 intron CG17684 - chr2R_9_2015001 chr2R_2015001 RAL-508 574 chr2R 2498965 2499016 chr2R 2508132 2508182 roo 15 9165 2.0 7.0 4.5 2.7 9217 chr2R 2498965 intron MFS17 - chr2R 2503574 intron MFS17 - chr2R 2508182 intron MFS17 - chr2R_15_2500001 chr2R_2500001 RAL-508 575 chr2R 2508290 2508334 chr2R 2508445 2508492 11 156 2.0 3.0 2.5 3.1 202 chr2R 2508290 intron MFS17 - chr2R 2508391 intron MFS17 - chr2R 2508492 intron MFS17 - chr2R_11_2505001 chr2R_2505001 RAL-508 576 chr2R 3030125 3030137 chr2R 3030232 3030245 7 105 23.0 13.5 18.2 0.4 120 chr2R 3030125 intergenic not near genes chr2R 3030185 intergenic not near genes chr2R 3030245 intergenic not near genes chr2R_7_3030001 chr2R_3030001 RAL-508 577 chr2R 3130211 3130233 chr2R 3130317 3130340 6 105 5.0 3.5 4.2 1.2 129 chr2R 3130211 intron CG42596 + chr2R 3130276 intron CG42596 + chr2R 3130340 intron CG42596 + chr2R_6_3130001 chr2R_3130001 RAL-508 578 chr2R 3130235 3130250 chr2R 3130316 3130356 6 102 3.5 3.5 3.5 1.3 121 chr2R 3130235 intron CG42596 + chr2R 3130296 intron CG42596 + chr2R 3130356 intron CG42596 + chr2R_6_3130001 chr2R_3130001 RAL-508 579 chr2R 3293726 3293755 chr2R 3293824 3293853 5 98 6.0 3.0 4.5 0.9 127 chr2R 3293726 intergenic not near genes chr2R 3293790 intergenic not near genes chr2R 3293853 intergenic not near genes chr2R_5_3290001 chr2R_3290001 RAL-508 580 chr2R 3583041 3583091 chr2R 3583134 3583187 9 91 4.0 4.5 4.2 1.7 146 chr2R 3583041 intergenic not near genes chr2R 3583114 intergenic not near genes chr2R 3583187 intergenic not near genes chr2R_9_3580001 chr2R_3580001 RAL-508 581 chr2R 3291826 3291952 chr2R 3914905 3915031 4 623078 13.0 25.5 19.2 0.2 623205 chr2R 3291826 intergenic not near genes chr2R 3603428 intergenic not near genes chr2R 3915031 intron uex - chr2R_4_3600001 chr2R_3600001 RAL-508 582 chr2R 4015299 4015348 chr2R 4015492 4015531 11 191 3.0 5.0 4.0 2.2 232 chr2R 4015299 intron Haspin + chr2R 4015415 intron Haspin + chr2R 4015531 intron Haspin + chr2R_11_4015001 chr2R_4015001 RAL-508 583 chr2R 4387297 4387308 chr2R 4387468 4387479 6 170 2.0 0.0 1.0 3.0 182 chr2R 4387297 intron Gprk1 - chr2R 4387388 intron Gprk1 - chr2R 4387479 intron Gprk1 - chr2R_6_4385001 chr2R_4385001 RAL-508 584 chr2R 4621300 4621346 chr2R 4621859 4621906 16 554 2.5 5.0 3.8 3.3 606 chr2R 4621300 3` UTR CR44101 - chr2R 4621603 3` UTR CR44101 - chr2R 4621906 3` UTR CR44101 - chr2R_16_4620001 chr2R_4620001 RAL-508 585 chr2R 4622937 4622985 chr2R 4624116 4624122 1360 17 1171 3.5 3.0 3.2 4.0 1185 chr2R 4622937 intergenic CR44101 - chr2R 4623530 intergenic not near genes chr2R 4624122 intergenic not near genes chr2R_17_4620001 chr2R_4620001 RAL-508 586 chr2R 4731945 4731983 chr2R 4732040 4732086 5 101 3.5 8.5 6.0 0.7 141 chr2R 4731945 intergenic not near genes chr2R 4732016 intergenic not near genes chr2R 4732086 intergenic not near genes chr2R_5_4730001 chr2R_4730001 RAL-508 587 chr2R 4940943 4940958 chr2R 4943413 4943427 5 2469 62.0 46.0 54.0 0.1 2484 chr2R 4940943 intron Ir41a + chr2R 4942185 intron Ir41a + chr2R 4943427 intron Ir41a + chr2R_5_4940001 chr2R_4940001 RAL-508 588 chr2R 5019260 5019312 chr2R 5019366 5019418 35 104 5.5 10.0 7.8 4.0 158 chr2R 5019260 intron Ir41a + chr2R 5019339 intron Ir41a + chr2R 5019418 intron Ir41a + chr2R_35_5015001 chr2R_5015001 RAL-508 589 chr2R 5075209 5075245 chr2R 5075349 5075372 8 142 6.0 0.5 3.2 1.9 163 chr2R 5075209 intergenic not near genes chr2R 5075290 intergenic not near genes chr2R 5075372 intergenic not near genes chr2R_8_5075001 chr2R_5075001 RAL-508 590 chr2R 5075250 5075373 chr2R 5075761 5075809 10 480 0.5 7.5 4.0 2.0 559 chr2R 5075250 intergenic not near genes chr2R 5075530 intergenic not near genes chr2R 5075809 intergenic not near genes chr2R_10_5075001 chr2R_5075001 RAL-508 591 chr2R 5080802 5080818 chr2R 5080878 5080929 15 100 3.5 4.5 4.0 3.0 127 chr2R 5080802 intergenic not near genes chr2R 5080866 intergenic not near genes chr2R 5080929 intergenic not near genes chr2R_15_5080001 chr2R_5080001 RAL-508 592 chr2R 5192701 5192718 chr2R 5192798 5192814 8 97 5.0 5.5 5.2 1.3 113 chr2R 5192701 intron Nipped-A - chr2R 5192758 intron Nipped-A - chr2R 5192814 intron Nipped-A - chr2R_8_5190001 chr2R_5190001 RAL-508 593 chr2R 5237339 5237373 chr2R 5237436 5237473 16 98 2.0 0.5 1.2 7.3 134 chr2R 5237339 intron Nipped-A - chr2R 5237406 intron Nipped-A - chr2R 5237473 intron Nipped-A - chr2R_16_5235001 chr2R_5235001 RAL-508 594 chr2R 5240211 5240225 chr2R 5240286 5240321 6 89 12.0 7.0 9.5 0.6 110 chr2R 5240211 intron Nipped-A - chr2R 5240266 intron Nipped-A - chr2R 5240321 intron Nipped-A - chr2R_6_5240001 chr2R_5240001 RAL-508 595 chr2R 5303479 5303515 chr2R 5303580 5303623 11 107 2.0 3.5 2.8 2.9 144 chr2R 5303479 intergenic not near genes chr2R 5303551 intergenic not near genes chr2R 5303623 intergenic not near genes chr2R_11_5300001 chr2R_5300001 RAL-508 596 chr2R 5363473 5363519 chr2R 5363568 5363617 11 96 3.0 5.0 4.0 2.2 144 chr2R 5363473 5` UTR CR42646 + chr2R 5363545 intron CR42646 + chr2R 5363617 intron CR42646 + chr2R_11_5360001 chr2R_5360001 RAL-508 597 chr2R 5396240 5396287 chr2R 5396497 5396540 16 256 17.5 19.0 18.2 0.8 300 chr2R 5396240 intergenic not near genes chr2R 5396390 intergenic not near genes chr2R 5396540 intergenic not near genes chr2R_16_5395001 chr2R_5395001 RAL-508 598 chr2R 5417974 5418026 chr2R 5420626 5420678 Burdock 15 2652 2.5 5.0 3.8 3.1 2704 chr2R 5417974 intron laccase2 + chr2R 5419326 intron laccase2 + chr2R 5420678 intron laccase2 + chr2R_15_5415001 chr2R_5415001 RAL-508 599 chr2R 5472348 5472394 chr2R 5472462 5472502 11 106 4.0 4.5 4.2 2.1 154 chr2R 5472348 intron CG30440 - chr2R 5472425 intron CG30440 - chr2R 5472502 intron CG30440 - chr2R_11_5470001 chr2R_5470001 RAL-508 600 chr2R 5473354 5473399 chr2R 5473463 5473500 15 109 4.5 5.0 4.8 2.6 146 chr2R 5473354 intron CG30440 - chr2R 5473427 intron CG30440 - chr2R 5473500 intron CG30440 - chr2R_15_5470001 chr2R_5470001 RAL-508 601 chr2R 5581404 5581417 chr2R 5627602 5627646 8 46221 2.5 6.5 4.5 1.5 46242 chr2R 5581404 intergenic not near genes chr2R 5604525 intron Fis1 - chr2R 5627646 intergenic not near genes chr2R_8_5600001 chr2R_5600001 RAL-508 602 chr2R 5621009 5621048 chr2R 5621158 5621167 9 145 7.5 4.0 5.8 1.3 158 chr2R 5621009 intergenic not near genes chr2R 5621088 intergenic not near genes chr2R 5621167 intergenic not near genes chr2R_9_5620001 chr2R_5620001 RAL-508 603 chr2R 5621351 5621402 chr2R 5621451 5621487 7 97 1.5 1.5 1.5 2.8 136 chr2R 5621351 intergenic not near genes chr2R 5621419 intergenic not near genes chr2R 5621487 intergenic not near genes chr2R_7_5620001 chr2R_5620001 RAL-508 604 chr2R 5640023 5640029 chr2R 5640104 5640126 4 91 8.5 6.5 7.5 0.5 103 chr2R 5640023 intergenic not near genes chr2R 5640074 intergenic not near genes chr2R 5640126 intergenic not near genes chr2R_4_5640001 chr2R_5640001 RAL-508 605 chr2R 5640030 5640044 chr2R 5640101 5640140 9 91 5.5 6.5 6.0 1.3 110 chr2R 5640030 intergenic not near genes chr2R 5640085 intergenic not near genes chr2R 5640140 intergenic not near genes chr2R_9_5640001 chr2R_5640001 RAL-508 606 chr2R 5640456 5640471 chr2R 5640561 5640583 10 109 6.5 10.0 8.2 1.1 127 chr2R 5640456 intergenic CG11665 - chr2R 5640520 intergenic CG11665 - chr2R 5640583 intergenic CG11665 - chr2R_10_5640001 chr2R_5640001 RAL-508 607 chr2R 5640473 5640493 chr2R 5640556 5640604 6 98 5.5 8.0 6.8 0.8 131 chr2R 5640473 intergenic CG11665 - chr2R 5640538 intergenic CG11665 - chr2R 5640604 intergenic CG11665 - chr2R_6_5640001 chr2R_5640001 RAL-508 608 chr2R 5647030 5647055 chr2R 5649516 5649524 INE-1 6 2485 16.0 17.5 16.8 0.3 2494 chr2R 5647030 intron CG11665 - chr2R 5648277 intron CG11665 - chr2R 5649524 intron CG11665 - chr2R_6_5645001 chr2R_5645001 RAL-508 609 chr2R 5655399 5655447 chr2R 5655495 5655525 20 96 6.0 6.5 6.2 2.8 126 chr2R 5655399 exon CG1344 + chr2R 5655462 exon CG1344 + chr2R 5655525 exon CG1344 + chr2R_20_5655001 chr2R_5655001 RAL-508 610 chr2R 5655864 5655903 chr2R 5655972 5656011 13 104 5.0 5.0 5.0 2.2 147 chr2R 5655864 3` UTR CG1344 + chr2R 5655938 3` UTR CG1344 + chr2R 5656011 3` UTR CG1344 + chr2R_13_5655001 chr2R_5655001 RAL-508 611 chr2R 5750429 5750454 chr2R 5750541 5750564 8 111 6.0 6.5 6.2 1.1 135 chr2R 5750429 intergenic not near genes chr2R 5750496 intergenic not near genes chr2R 5750564 intergenic not near genes chr2R_8_5750001 chr2R_5750001 RAL-508 612 chr2R 5772520 5772637 chr2R 5772632 5772795 7 148 0.0 0.0 0.0 7.0 275 chr2R 5772520 3` UTR Gp210 + chr2R 5772658 3` UTR Gp210 + chr2R 5772795 3` UTR Gp210 + chr2R_7_5770001 chr2R_5770001 RAL-508 613 chr2R 5869262 5869304 chr2R 5874358 5874393 flea 13 5093 5.5 8.0 6.8 1.7 5131 chr2R 5869262 intergenic not near genes chr2R 5871828 intergenic not near genes chr2R 5874393 intergenic not near genes chr2R_13_5870001 chr2R_5870001 RAL-508 614 chr2R 5876862 5876900 chr2R 5876981 5877022 6 120 8.0 6.0 7.0 0.8 160 chr2R 5876862 intergenic not near genes chr2R 5876942 intergenic not near genes chr2R 5877022 intergenic not near genes chr2R_6_5875001 chr2R_5875001 RAL-508 615 chr2R 5878904 5878957 chr2R 5879004 5879036 19 94 2.5 4.0 3.2 4.5 132 chr2R 5878904 intergenic CG44438 - chr2R 5878970 intergenic CG44438 - chr2R 5879036 intergenic CG44438 - chr2R_19_5875001 chr2R_5875001 RAL-508 616 chr2R 5885347 5885376 chr2R 5885495 5885524 7 148 3.5 5.0 4.2 1.3 177 chr2R 5885347 5` UTR CR44125 + chr2R 5885436 5` UTR CR44125 + chr2R 5885524 5` UTR CR44125 + chr2R_7_5885001 chr2R_5885001 RAL-508 617 chr2R 5902146 5902167 chr2R 5909714 5909746 17.6 8 7577 3.5 3.5 3.5 1.8 7600 chr2R 5902146 intron CG43366 + chr2R 5905946 intron CG43366 + chr2R 5909746 intron CG43366 + chr2R_8_5905001 chr2R_5905001 RAL-508 618 chr2R 6096719 6096743 chr2R 6101909 6101935 BS 7 5201 4.0 4.0 4.0 1.4 5216 chr2R 6096719 intron EcR - chr2R 6099327 intron EcR - chr2R 6101935 intron EcR - chr2R_7_6095001 chr2R_6095001 RAL-508 619 chr2R 6127461 6127495 chr2R 6127596 6127631 13 132 2.0 8.0 5.0 2.2 170 chr2R 6127461 intron EcR - chr2R 6127546 intron EcR - chr2R 6127631 intron EcR - chr2R_13_6125001 chr2R_6125001 RAL-508 620 chr2R 6178111 6178132 chr2R 6178256 6178278 9 146 5.5 2.0 3.8 1.9 167 chr2R 6178111 intergenic not near genes chr2R 6178194 intergenic not near genes chr2R 6178278 intergenic not near genes chr2R_9_6175001 chr2R_6175001 RAL-508 621 chr2R 3998867 3998875 chr2R 6486823 6486832 4 2487956 26.0 16.0 21.0 0.2 2487965 chr2R 3998867 intergenic not near genes chr2R 5242850 intron Nipped-A - chr2R 6486832 intergenic not near genes chr2R_4_5240001 chr2R_5240001 RAL-508 622 chr2R 6492538 6492555 chr2R 6492633 6492650 5 95 0.0 13.0 6.5 0.7 112 chr2R 6492538 intergenic not near genes chr2R 6492594 intergenic not near genes chr2R 6492650 intergenic not near genes chr2R_5_6490001 chr2R_6490001 RAL-508 623 chr2R 6579758 6579782 chr2R 6584864 6584888 flea 5 5104 2.5 2.5 2.5 1.4 5130 chr2R 6579758 intron jing + chr2R 6582323 intron jing + chr2R 6584888 intron jing + chr2R_5_6580001 chr2R_6580001 RAL-508 624 chr2R 6712574 6712601 chr2R 6712690 6712717 9 116 10.5 4.0 7.2 1.1 143 chr2R 6712574 intron,intron CG3409 -,CG45092 - chr2R 6712646 intron,intron CG3409 -,CG45092 - chr2R 6712717 intron,intron CG3409 -,CG45092 - chr2R_9_6710001 chr2R_6710001 RAL-508 625 chr2R 6952166 6952182 chr2R 6959760 6959782 opus 4 7598 4.5 4.0 4.2 0.8 7616 chr2R 6952166 intron,intron mim -,CheB42c - chr2R 6955974 intron,intron mim -,CheB42c - chr2R 6959782 intron,intron mim -,CheB42c - chr2R_4_6955001 chr2R_6955001 RAL-508 626 chr2R 7025880 7025928 chr2R 7025989 7026035 14 104 6.0 5.0 5.5 2.2 155 chr2R 7025880 intron Tsp42Ef + chr2R 7025958 intron Tsp42Ef + chr2R 7026035 intron Tsp42Ef + chr2R_14_7025001 chr2R_7025001 RAL-508 627 chr2R 7076365 7076416 chr2R 7076470 7076521 11 104 1.5 2.5 2.0 3.7 156 chr2R 7076365 intergenic not near genes chr2R 7076443 intergenic not near genes chr2R 7076521 intergenic not near genes chr2R_11_7075001 chr2R_7075001 RAL-508 628 chr2R 7180992 7181008 chr2R 7181088 7181089 5 93 4.5 3.5 4.0 1.0 97 chr2R 7180992 intron pk + chr2R 7181040 intron pk + chr2R 7181089 intron pk + chr2R_5_7180001 chr2R_7180001 RAL-508 629 chr2R 7181013 7181023 chr2R 7181081 7181103 6 86 1.0 3.0 2.0 2.0 90 chr2R 7181013 intron pk + chr2R 7181058 intron pk + chr2R 7181103 intron pk + chr2R_6_7180001 chr2R_7180001 RAL-508 630 chr2R 7235816 7235849 chr2R 7240911 7240961 jockey 5 5105 3.0 2.0 2.5 1.4 5145 chr2R 7235816 intergenic not near genes chr2R 7238388 intergenic not near genes chr2R 7240961 intergenic not near genes chr2R_5_7235001 chr2R_7235001 RAL-508 631 chr2R 7328109 7328144 chr2R 7328240 7328275 7 131 4.0 4.0 4.0 1.4 166 chr2R 7328109 intron,intron Dscam1 -,CR45129 + chr2R 7328192 intron,intron Dscam1 -,CR45129 + chr2R 7328275 intron,intron Dscam1 -,CR45129 + chr2R_7_7325001 chr2R_7325001 RAL-508 632 chr2R 7353366 7353419 chr2R 7353492 7353543 12 125 4.0 2.5 3.2 2.9 177 chr2R 7353366 intron Dscam1 - chr2R 7353454 intron Dscam1 - chr2R 7353543 intron Dscam1 - chr2R_12_7350001 chr2R_7350001 RAL-508 633 chr2R 7532115 7532149 chr2R 7532336 7532342 7 216 6.0 4.5 5.2 1.1 227 chr2R 7532115 intron Drat - chr2R 7532228 intron Drat - chr2R 7532342 intron Drat - chr2R_7_7530001 chr2R_7530001 RAL-508 634 chr2R 7608389 7608444 chr2R 7613612 7613666 I-element 11 5221 0.0 0.0 0.0 11.0 5277 chr2R 7608389 intron CG1358 - chr2R 7611028 intron CG1358 - chr2R 7613666 intron CG1358 - chr2R_11_7610001 chr2R_7610001 RAL-508 635 chr2R 7642852 7642888 chr2R 7642952 7642988 14 99 5.5 2.5 4.0 2.8 136 chr2R 7642852 intron CG43340 + chr2R 7642920 intron CG43340 + chr2R 7642988 intron CG43340 + chr2R_14_7640001 chr2R_7640001 RAL-508 636 chr2R 7769720 7769764 chr2R 7769816 7769861 9 97 4.0 2.5 3.2 2.1 141 chr2R 7769720 intron,intron CG30497 -,CG45093 - chr2R 7769790 intron,intron CG30497 -,CG45093 - chr2R 7769861 intron,intron CG30497 -,CG45093 - chr2R_9_7765001 chr2R_7765001 RAL-508 637 chr2R 7815653 7815700 chr2R 7822141 7822189 Burdock 12 6487 5.5 2.0 3.8 2.5 6536 chr2R 7815653 intergenic CG1882 + chr2R 7818921 intergenic not near genes chr2R 7822189 3` UTR cathD - chr2R_12_7815001 chr2R_7815001 RAL-508 638 chr2R 7869175 7869221 chr2R 7873981 7873997 Doc 12 4802 7.5 7.0 7.2 1.5 4822 chr2R 7869175 intron Dgk - chr2R 7871586 intron Dgk - chr2R 7873997 intron Dgk - chr2R_12_7870001 chr2R_7870001 RAL-508 639 chr2R 7916403 7916457 chr2R 7916508 7916561 14 102 4.5 5.5 5.0 2.3 158 chr2R 7916403 5` UTR CG12159 - chr2R 7916482 intergenic CG12159 -,Cul1 + chr2R 7916561 intergenic CG12159 -,Cul1 + chr2R_14_7915001 chr2R_7915001 RAL-508 640 chr2R 7922487 7922498 chr2R 7922612 7922619 5 124 6.0 5.0 5.5 0.8 132 chr2R 7922487 exon Or43b - chr2R 7922553 5` UTR Or43b - chr2R 7922619 intergenic Or43b -,Kdm4A - chr2R_5_7920001 chr2R_7920001 RAL-508 641 chr2R 7922500 7922512 chr2R 7922592 7922592 9 102 5.0 3.0 4.0 1.8 92 chr2R 7922500 exon Or43b - chr2R 7922546 5` UTR Or43b - chr2R 7922592 5` UTR Or43b - chr2R_9_7920001 chr2R_7920001 RAL-508 642 chr2R 7942913 7942943 chr2R 7943190 7943220 5 275 6.0 5.5 5.8 0.7 307 chr2R 7942913 intron CG14764 - chr2R 7943066 intron CG14764 - chr2R 7943220 intron CG14764 - chr2R_5_7940001 chr2R_7940001 RAL-508 643 chr2R 7956427 7956454 chr2R 7956512 7956551 14 94 4.0 4.0 4.0 2.8 124 chr2R 7956427 intron CG2906 + chr2R 7956489 intron CG2906 + chr2R 7956551 intron CG2906 + chr2R_14_7955001 chr2R_7955001 RAL-508 644 chr2R 7997428 7997453 chr2R 7997549 7997561 8 123 0.5 4.0 2.2 2.5 133 chr2R 7997428 intron Hey - chr2R 7997494 intron Hey - chr2R 7997561 intron Hey - chr2R_8_7995001 chr2R_7995001 RAL-508 645 chr2R 8015644 8015680 chr2R 8017687 8017713 13 2032 3.5 4.5 4.0 2.6 2069 chr2R 8015644 intergenic mir-4981 + chr2R 8016678 intergenic not near genes chr2R 8017713 intergenic not near genes chr2R_13_8015001 chr2R_8015001 RAL-508 646 chr2R 8067052 8067089 chr2R 8067156 8067184 10 102 3.5 6.0 4.8 1.7 132 chr2R 8067052 intron CG17977 - chr2R 8067118 intron CG17977 - chr2R 8067184 exon CG17977 - chr2R_10_8065001 chr2R_8065001 RAL-508 647 chr2R 8076662 8076710 chr2R 8076761 8076810 17 99 3.5 2.5 3.0 4.2 148 chr2R 8076662 intron lig + chr2R 8076736 intron lig + chr2R 8076810 intron lig + chr2R_17_8075001 chr2R_8075001 RAL-508 648 chr2R 8114022 8114048 chr2R 8114122 8114156 8 106 0.0 2.5 1.2 3.6 134 chr2R 8114022 intergenic Asap - chr2R 8114089 intergenic Asap - chr2R 8114156 intergenic Asap - chr2R_8_8110001 chr2R_8110001 RAL-508 649 chr2R 8151615 8151630 chr2R 8151687 8151725 10 88 3.5 1.5 2.5 2.9 110 chr2R 8151615 intron,intron Lpin -,kermit - chr2R 8151670 intron,intron Lpin -,kermit - chr2R 8151725 intron,intron Lpin -,kermit - chr2R_10_8150001 chr2R_8150001 RAL-508 650 chr2R 8153784 8153819 chr2R 8154136 8154171 10 350 4.0 2.5 3.2 2.4 387 chr2R 8153784 intron,intron Lpin -,kermit - chr2R 8153978 intron,intron Lpin -,kermit - chr2R 8154171 intron,intron Lpin -,kermit - chr2R_10_8150001 chr2R_8150001 RAL-508 651 chr2R 8155561 8155597 chr2R 8155670 8155704 8 108 3.5 5.0 4.2 1.5 143 chr2R 8155561 intron,intron Lpin -,kermit - chr2R 8155632 intron,intron Lpin -,kermit - chr2R 8155704 intron,intron Lpin -,kermit - chr2R_8_8155001 chr2R_8155001 RAL-508 652 chr2R 8160923 8160946 chr2R 8161031 8161055 1360 11 109 4.5 11.5 8.0 1.2 132 chr2R 8160923 exon CG8708 - chr2R 8160989 intron CG8708 - chr2R 8161055 intron CG8708 - chr2R_11_8160001 chr2R_8160001 RAL-508 653 chr2R 8166539 8166555 chr2R 8168710 8168758 13 2184 31.5 27.5 29.5 0.4 2219 chr2R 8166539 exon Rs1 + chr2R 8167648 exon Rs1 + chr2R 8168758 exon Gasz + chr2R_13_8165001 chr2R_8165001 RAL-508 654 chr2R 8203739 8203777 chr2R 8203851 8203889 15 111 4.5 3.5 4.0 3.0 150 chr2R 8203739 intron LRP1 + chr2R 8203814 intron LRP1 + chr2R 8203889 intron LRP1 + chr2R_15_8200001 chr2R_8200001 RAL-508 655 chr2R 8236017 8236059 chr2R 8236118 8236159 6 100 2.0 1.0 1.5 2.4 142 chr2R 8236017 intergenic not near genes chr2R 8236088 intergenic not near genes chr2R 8236159 intergenic not near genes chr2R_6_8235001 chr2R_8235001 RAL-508 656 chr2R 8329435 8329479 chr2R 8329539 8329570 19 97 5.0 1.5 3.2 4.5 135 chr2R 8329435 intron pdm3 + chr2R 8329502 intron pdm3 + chr2R 8329570 intron pdm3 + chr2R_19_8325001 chr2R_8325001 RAL-508 657 chr2R 8330860 8330879 chr2R 8331351 8331385 roo 11 502 1.5 3.0 2.2 3.4 525 chr2R 8330860 intron pdm3 + chr2R 8331122 intron pdm3 + chr2R 8331385 intron pdm3 + chr2R_11_8330001 chr2R_8330001 RAL-508 658 chr2R 8338634 8338667 chr2R 8338734 8338769 5 101 0.0 2.0 1.0 2.5 135 chr2R 8338634 intron pdm3 + chr2R 8338702 intron pdm3 + chr2R 8338769 intron pdm3 + chr2R_5_8335001 chr2R_8335001 RAL-508 659 chr2R 8398226 8398243 chr2R 8402996 8403014 Doc 5 4784 3.5 4.0 3.8 1.0 4788 chr2R 8398226 intron CG2121 - chr2R 8400620 intron CG2121 - chr2R 8403014 intron CG2121 - chr2R_5_8400001 chr2R_8400001 RAL-508 660 chr2R 8489965 8489969 chr2R 8490071 8490075 4 106 1.0 5.0 3.0 1.0 110 chr2R 8489965 intron mtt - chr2R 8490020 intron mtt - chr2R 8490075 intron mtt - chr2R_4_8490001 chr2R_8490001 RAL-508 661 chr2R 8508744 8508794 chr2R 8508843 8508894 5 94 1.0 6.5 3.8 1.0 150 chr2R 8508744 intron mtt - chr2R 8508819 intron mtt - chr2R 8508894 intron mtt - chr2R_5_8505001 chr2R_8505001 RAL-508 662 chr2R 8536236 8536253 chr2R 8536444 8536457 5 208 9.0 5.0 7.0 0.6 221 chr2R 8536236 intergenic not near genes chr2R 8536346 intergenic not near genes chr2R 8536457 intergenic not near genes chr2R_5_8535001 chr2R_8535001 RAL-508 663 chr2R 8536255 8536257 chr2R 8536437 8536466 5 203 8.5 3.0 5.8 0.7 211 chr2R 8536255 intergenic not near genes chr2R 8536360 intergenic not near genes chr2R 8536466 intergenic not near genes chr2R_5_8535001 chr2R_8535001 RAL-508 664 chr2R 8566012 8566066 chr2R 8566984 8567032 1360 9 965 6.0 0.0 3.0 2.2 1020 chr2R 8566012 5` UTR Cyp6a14 - chr2R 8566522 5` UTR Cyp6a14 - chr2R 8567032 5` UTR Cyp6a14 - chr2R_9_8565001 chr2R_8565001 RAL-508 665 chr2R 8612563 8612598 chr2R 8612660 8612695 7 97 2.5 1.0 1.8 2.5 132 chr2R 8612563 intron CG8642 - chr2R 8612629 intron CG8642 - chr2R 8612695 intron CG8642 - chr2R_7_8610001 chr2R_8610001 RAL-508 666 chr2R 8654149 8654186 chr2R 8654251 8654288 7 101 4.0 0.0 2.0 2.3 139 chr2R 8654149 intron ptc + chr2R 8654218 intron ptc + chr2R 8654288 intron ptc + chr2R_7_8650001 chr2R_8650001 RAL-508 667 chr2R 8668416 8668456 chr2R 8668524 8668564 4 108 0.5 2.0 1.2 1.8 148 chr2R 8668416 intron Acsl + chr2R 8668490 intron Acsl + chr2R 8668564 intron Acsl + chr2R_4_8665001 chr2R_8665001 RAL-508 668 chr2R 8722744 8722753 chr2R 8723005 8723012 pogo 4 260 7.0 3.0 5.0 0.7 268 chr2R 8722744 intron CG14767 - chr2R 8722878 intron CG14767 - chr2R 8723012 intron CG14767 - chr2R_4_8720001 chr2R_8720001 RAL-508 669 chr2R 8722757 8722794 chr2R 8723004 8723032 pogo 12 250 4.0 3.0 3.5 2.7 275 chr2R 8722757 intron CG14767 - chr2R 8722894 intron CG14767 - chr2R 8723032 intron CG14767 - chr2R_12_8720001 chr2R_8720001 RAL-508 670 chr2R 8742676 8742704 chr2R 8742788 8742818 5 113 1.0 2.5 1.8 1.8 142 chr2R 8742676 intron CG8740 + chr2R 8742747 intron CG8740 + chr2R 8742818 intron CG8740 + chr2R_5_8740001 chr2R_8740001 RAL-508 671 chr2R 8777933 8777942 chr2R 8784157 8784166 diver 9 6223 1.5 5.5 3.5 2.0 6233 chr2R 8777933 intergenic not near genes chr2R 8781050 intergenic not near genes chr2R 8784166 intergenic not near genes chr2R_9_8780001 chr2R_8780001 RAL-508 672 chr2R 8789466 8789492 chr2R 8789549 8789594 5 86 1.0 2.5 1.8 1.8 128 chr2R 8789466 intergenic not near genes chr2R 8789530 intergenic not near genes chr2R 8789594 intergenic not near genes chr2R_5_8785001 chr2R_8785001 RAL-508 673 chr2R 8805416 8805429 chr2R 8805504 8805526 4 95 0.0 3.0 1.5 1.6 110 chr2R 8805416 intron sns + chr2R 8805471 intron sns + chr2R 8805526 intron sns + chr2R_4_8805001 chr2R_8805001 RAL-508 674 chr2R 9026836 9026839 chr2R 9026976 9026979 4 140 6.0 7.0 6.5 0.5 143 chr2R 9026836 intron CG8170 - chr2R 9026908 intron CG8170 - chr2R 9026979 intron CG8170 - chr2R_4_9025001 chr2R_9025001 RAL-508 675 chr2R 9026841 9026852 chr2R 9026960 9026989 7 135 4.5 4.0 4.2 1.3 148 chr2R 9026841 intron CG8170 - chr2R 9026915 intron CG8170 - chr2R 9026989 intron CG8170 - chr2R_7_9025001 chr2R_9025001 RAL-508 676 chr2R 9031956 9032010 chr2R 9032054 9032108 24 97 5.5 13.0 9.2 2.4 152 chr2R 9031956 intergenic not near genes chr2R 9032032 intergenic not near genes chr2R 9032108 intergenic not near genes chr2R_24_9030001 chr2R_9030001 RAL-508 677 chr2R 9110130 9110158 chr2R 9110239 9110267 10 108 2.0 2.5 2.2 3.1 137 chr2R 9110130 intergenic Pmm45A - chr2R 9110198 intergenic Pmm45A - chr2R 9110267 intergenic not near genes chr2R_10_9110001 chr2R_9110001 RAL-508 678 chr2R 9151286 9151328 chr2R 9157773 9157806 Burdock 8 6488 5.5 3.0 4.2 1.5 6520 chr2R 9151286 exon CG30345 + chr2R 9154546 intergenic not near genes chr2R 9157806 intergenic CG8008 - chr2R_8_9150001 chr2R_9150001 RAL-508 679 chr2R 9212695 9212713 chr2R 9213177 9213178 roo 5 487 5.5 2.5 4.0 1.0 483 chr2R 9212695 intergenic CR45309 + chr2R 9212936 intergenic CR45309 + chr2R 9213178 5` UTR CR45309 + chr2R_5_9210001 chr2R_9210001 RAL-508 680 chr2R 9236494 9236544 chr2R 9237286 9237337 20 792 4.0 2.0 3.0 5.0 843 chr2R 9236494 intron hig - chr2R 9236916 intron hig - chr2R 9237337 intron hig - chr2R_20_9235001 chr2R_9235001 RAL-508 681 chr2R 9364373 9364392 chr2R 9364448 9364456 4 82 2.0 4.5 3.2 1.0 83 chr2R 9364373 intron CG13954 - chr2R 9364414 intron CG13954 - chr2R 9364456 intron CG13954 - chr2R_4_9360001 chr2R_9360001 RAL-508 682 chr2R 9368117 9368144 chr2R 9368204 9368239 8 88 3.5 0.0 1.8 2.9 122 chr2R 9368117 intron CG13954 - chr2R 9368178 intron CG13954 - chr2R 9368239 intron CG13954 - chr2R_8_9365001 chr2R_9365001 RAL-508 683 chr2R 9378094 9378138 chr2R 9378196 9378240 11 101 2.0 4.0 3.0 2.8 146 chr2R 9378094 intron CG13954 - chr2R 9378167 intron CG13954 - chr2R 9378240 intron CG13954 - chr2R_11_9375001 chr2R_9375001 RAL-508 684 chr2R 9415846 9415891 chr2R 9415950 9415997 14 105 3.0 1.5 2.2 4.4 151 chr2R 9415846 intron wun2 + chr2R 9415922 intron wun2 + chr2R 9415997 intron wun2 + chr2R_14_9415001 chr2R_9415001 RAL-508 685 chr2R 9480069 9480102 chr2R 9490620 9490652 roo 6 10546 2.0 1.5 1.8 2.1 10583 chr2R 9480069 intergenic not near genes chr2R 9485360 intergenic not near genes chr2R 9490652 intergenic not near genes chr2R_6_9485001 chr2R_9485001 RAL-508 686 chr2R 9510665 9510697 chr2R 9510800 9510833 9 135 1.5 4.0 2.8 2.4 168 chr2R 9510665 intron brp + chr2R 9510749 intron brp + chr2R 9510833 exon brp + chr2R_9_9510001 chr2R_9510001 RAL-508 687 chr2R 9547582 9547628 chr2R 9547679 9547693 8 93 1.5 1.0 1.2 3.6 111 chr2R 9547582 intergenic not near genes chr2R 9547638 intergenic not near genes chr2R 9547693 intergenic not near genes chr2R_8_9545001 chr2R_9545001 RAL-508 688 chr2R 9584440 9584477 chr2R 9584539 9584546 8 93 1.5 4.5 3.0 2.0 106 chr2R 9584440 intron CG1868 - chr2R 9584493 5` UTR CG1868 - chr2R 9584546 intergenic CG1868 -,Updo + chr2R_8_9580001 chr2R_9580001 RAL-508 689 chr2R 9653243 9653288 chr2R 9653347 9653392 8 104 1.5 2.0 1.8 2.9 149 chr2R 9653243 intron Mmp2 - chr2R 9653318 intron Mmp2 - chr2R 9653392 intron Mmp2 - chr2R_8_9650001 chr2R_9650001 RAL-508 690 chr2R 9726607 9726621 chr2R 9734178 9734191 17.6 4 7570 7.5 3.0 5.2 0.6 7584 chr2R 9726607 intron sqa - chr2R 9730399 intron sqa - chr2R 9734191 intron sqa - chr2R_4_9730001 chr2R_9730001 RAL-508 691 chr2R 9782424 9782475 chr2R 9782533 9782584 9 105 3.0 5.5 4.2 1.7 160 chr2R 9782424 intron CG1688 - chr2R 9782504 intron CG1688 - chr2R 9782584 intron CG1688 - chr2R_9_9780001 chr2R_9780001 RAL-508 692 chr2R 9830259 9830299 chr2R 9830357 9830401 7 101 3.0 5.0 4.0 1.4 142 chr2R 9830259 intron hebe - chr2R 9830330 intron hebe - chr2R 9830401 intron hebe - chr2R_7_9830001 chr2R_9830001 RAL-508 693 chr2R 9871024 9871067 chr2R 9871527 9871572 roo 12 502 2.0 4.0 3.0 3.0 548 chr2R 9871024 intron cbx - chr2R 9871298 intron cbx - chr2R 9871572 intron,5` UTR cbx -,CG18446 + chr2R_12_9870001 chr2R_9870001 RAL-508 694 chr2R 9928402 9928452 chr2R 9928547 9928596 17 141 3.0 3.0 3.0 4.2 194 chr2R 9928402 intron Mef2 - chr2R 9928499 intron Mef2 - chr2R 9928596 intron Mef2 - chr2R_17_9925001 chr2R_9925001 RAL-508 695 chr2R 9935019 9935060 chr2R 9935119 9935160 8 99 3.5 5.5 4.5 1.5 141 chr2R 9935019 intron Mef2 - chr2R 9935090 intron Mef2 - chr2R 9935160 intron Mef2 - chr2R_8_9935001 chr2R_9935001 RAL-508 696 chr2R 9945437 9945458 chr2R 9945643 9945674 BS 7 213 6.5 3.5 5.0 1.2 237 chr2R 9945437 intron Mef2 - chr2R 9945556 intron Mef2 - chr2R 9945674 intron Mef2 - chr2R_7_9945001 chr2R_9945001 RAL-508 697 chr2R 9945463 9945468 chr2R 9945636 9945684 BS 7 208 5.5 2.0 3.8 1.5 221 chr2R 9945463 intron Mef2 - chr2R 9945574 intron Mef2 - chr2R 9945684 intron Mef2 - chr2R_7_9945001 chr2R_9945001 RAL-508 698 chr2R 9948366 9948407 chr2R 9948462 9948467 5 86 1.5 2.5 2.0 1.7 101 chr2R 9948366 intron Mef2 - chr2R 9948416 intron Mef2 - chr2R 9948467 intron Mef2 - chr2R_5_9945001 chr2R_9945001 RAL-508 699 chr2R 9956044 9956092 chr2R 9956141 9956143 17 92 5.0 4.0 4.5 3.1 99 chr2R 9956044 intron Mef2 - chr2R 9956094 intron Mef2 - chr2R 9956143 intron Mef2 - chr2R_17_9955001 chr2R_9955001 RAL-508 700 chr2R 9975912 9975942 chr2R 9976031 9976054 12 121 5.0 0.0 2.5 3.4 142 chr2R 9975912 intergenic not near genes chr2R 9975983 intergenic not near genes chr2R 9976054 intergenic not near genes chr2R_12_9975001 chr2R_9975001 RAL-508 701 chr2R 10017628 10017672 chr2R 10017727 10017768 14 97 4.5 4.0 4.2 2.7 140 chr2R 10017628 intron Pka-R2 - chr2R 10017698 intron Pka-R2 - chr2R 10017768 intron Pka-R2 - chr2R_14_10015001 chr2R_10015001 RAL-508 702 chr2R 10087742 10087754 chr2R 10087849 10087861 5 107 6.5 4.5 5.5 0.8 119 chr2R 10087742 intron CG2269 + chr2R 10087802 intron CG2269 + chr2R 10087861 intron CG2269 + chr2R_5_10085001 chr2R_10085001 RAL-508 703 chr2R 10168335 10168362 chr2R 10168432 10168459 7 95 5.0 5.0 5.0 1.2 124 chr2R 10168335 intron KCNQ - chr2R 10168397 intron KCNQ - chr2R 10168459 intron KCNQ - chr2R_7_10165001 chr2R_10165001 RAL-508 704 chr2R 10176876 10176910 chr2R 10186063 10186097 roo 7 9187 4.0 2.0 3.0 1.8 9221 chr2R 10176876 intron KCNQ - chr2R 10181486 intron KCNQ - chr2R 10186097 intron KCNQ - chr2R_7_10180001 chr2R_10180001 RAL-508 705 chr2R 10274810 10274822 chr2R 10274906 10274917 7 95 7.0 0.0 3.5 1.6 107 chr2R 10274810 intron CAP + chr2R 10274864 intron CAP + chr2R 10274917 intron CAP + chr2R_7_10270001 chr2R_10270001 RAL-508 706 chr2R 10300627 10300672 chr2R 10300743 10300788 8 116 0.5 0.0 0.2 6.7 161 chr2R 10300627 intron CAP + chr2R 10300708 intron CAP + chr2R 10300788 intron CAP + chr2R_8_10300001 chr2R_10300001 RAL-508 707 chr2R 10313303 10313334 chr2R 10313408 10313410 4 98 0.0 4.5 2.2 1.2 107 chr2R 10313303 intergenic not near genes chr2R 10313356 intergenic not near genes chr2R 10313410 intergenic Ndg + chr2R_4_10310001 chr2R_10310001 RAL-508 708 chr2R 10352652 10352699 chr2R 10352749 10352796 11 93 2.5 6.0 4.2 2.1 144 chr2R 10352652 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352724 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352796 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_11_10350001 chr2R_10350001 RAL-508 709 chr2R 10417440 10417452 chr2R 10417546 10417556 4 104 16.0 8.5 12.2 0.3 116 chr2R 10417440 intergenic CG42732 - chr2R 10417498 intergenic not near genes chr2R 10417556 intergenic not near genes chr2R_4_10415001 chr2R_10415001 RAL-508 710 chr2R 10454077 10454119 chr2R 10454174 10454216 17 96 5.0 2.5 3.8 3.5 139 chr2R 10454077 intron,intron Galphao +,Cyp49a1 - chr2R 10454146 intron,intron Galphao +,Cyp49a1 - chr2R 10454216 intron,intron Galphao +,Cyp49a1 - chr2R_17_10450001 chr2R_10450001 RAL-508 711 chr2R 10454122 10454129 chr2R 10454172 10454225 5 84 3.5 2.5 3.0 1.2 103 chr2R 10454122 intron,intron Galphao +,Cyp49a1 - chr2R 10454174 intron,intron Galphao +,Cyp49a1 - chr2R 10454225 intron,intron Galphao +,Cyp49a1 - chr2R_5_10450001 chr2R_10450001 RAL-508 712 chr2R 10466118 10466152 chr2R 10466223 10466257 9 102 5.0 3.0 4.0 1.8 139 chr2R 10466118 3` UTR Caf1-105 - chr2R 10466188 exon Caf1-105 - chr2R 10466257 exon Caf1-105 - chr2R_9_10465001 chr2R_10465001 RAL-508 713 chr2R 10469002 10469049 chr2R 10469148 10469195 20 142 7.5 3.0 5.2 3.2 193 chr2R 10469002 intron CG11777 + chr2R 10469098 intron CG11777 + chr2R 10469195 intron CG11777 + chr2R_20_10465001 chr2R_10465001 RAL-508 714 chr2R 10563563 10563582 chr2R 10563635 10563682 7 95 3.5 8.5 6.0 1.0 119 chr2R 10563563 intron psq + chr2R 10563622 intron psq + chr2R 10563682 intron psq + chr2R_7_10560001 chr2R_10560001 RAL-508 715 chr2R 10574605 10574644 chr2R 10574707 10574746 8 101 7.0 5.0 6.0 1.1 141 chr2R 10574605 intron psq + chr2R 10574676 intron psq + chr2R 10574746 intron psq + chr2R_8_10570001 chr2R_10570001 RAL-508 716 chr2R 10582096 10582126 chr2R 10582211 10582241 6 115 7.0 0.0 3.5 1.3 145 chr2R 10582096 intron psq + chr2R 10582168 intron psq + chr2R 10582241 intron psq + chr2R_6_10580001 chr2R_10580001 RAL-508 717 chr2R 10644044 10644069 chr2R 10644142 10644167 6 98 3.0 0.5 1.8 2.1 123 chr2R 10644044 intron Git - chr2R 10644106 intron Git - chr2R 10644167 intron Git - chr2R_6_10640001 chr2R_10640001 RAL-508 718 chr2R 10827319 10827358 chr2R 10827427 10827466 17 105 6.5 5.5 6.0 2.4 147 chr2R 10827319 exon CG12325 + chr2R 10827392 3` UTR CG12325 + chr2R 10827466 3` UTR,3` UTR CG12325 +,CG12344 - chr2R_17_10825001 chr2R_10825001 RAL-508 719 chr2R 10937829 10937878 chr2R 10938028 10938053 18 194 3.0 3.5 3.2 4.3 224 chr2R 10937829 intergenic not near genes chr2R 10937941 intergenic Spn47C - chr2R 10938053 intergenic Spn47C - chr2R_18_10935001 chr2R_10935001 RAL-508 720 chr2R 10947072 10947123 chr2R 10947179 10947221 4 102 1.5 0.0 0.8 2.2 149 chr2R 10947072 5` UTR CR45228 + chr2R 10947146 intergenic CR45228 + chr2R 10947221 intergenic CR45228 + chr2R_4_10945001 chr2R_10945001 RAL-508 721 chr2R 10948024 10948061 chr2R 10955576 10955632 17.6 8 7555 1.0 3.0 2.0 2.7 7608 chr2R 10948024 intergenic not near genes chr2R 10951828 intergenic not near genes chr2R 10955632 intergenic not near genes chr2R_8_10950001 chr2R_10950001 RAL-508 722 chr2R 11009806 11009841 chr2R 11018993 11019021 roo 9 9190 4.0 5.5 4.8 1.6 9215 chr2R 11009806 intron luna - chr2R 11014414 intron luna - chr2R 11019021 intron luna - chr2R_9_11010001 chr2R_11010001 RAL-508 723 chr2R 11019862 11019910 chr2R 11024945 11024945 jockey 6 5072 2.0 5.5 3.8 1.2 5083 chr2R 11019862 intron luna - chr2R 11022404 intron luna - chr2R 11024945 intron luna - chr2R_6_11020001 chr2R_11020001 RAL-508 724 chr2R 11102865 11102884 chr2R 11102951 11102976 7 97 4.0 0.0 2.0 2.3 111 chr2R 11102865 intron luna - chr2R 11102920 intron luna - chr2R 11102976 intron luna - chr2R_7_11100001 chr2R_11100001 RAL-508 725 chr2R 11158184 11158236 chr2R 11158575 11158627 12 390 1.5 2.5 2.0 4.0 443 chr2R 11158184 intron CG13229 - chr2R 11158406 intron CG13229 - chr2R 11158627 intron CG13229 - chr2R_12_11155001 chr2R_11155001 RAL-508 726 chr2R 11277814 11277841 chr2R 11277901 11277945 10 101 3.5 5.0 4.2 1.9 131 chr2R 11277814 intergenic Cpr47Eg - chr2R 11277880 intergenic Cpr47Eg - chr2R 11277945 intergenic Cpr47Eg - chr2R_10_11275001 chr2R_11275001 RAL-508 727 chr2R 11292971 11293049 chr2R 11293049 11293152 6 102 0.0 0.0 0.0 6.0 181 chr2R 11292971 exon,3` UTR dare -,CG30033 + chr2R 11293062 5` UTR,3` UTR dare -,CG30033 + chr2R 11293152 5` UTR,3` UTR dare -,CG30033 + chr2R_6_11290001 chr2R_11290001 RAL-508 728 chr2R 11297612 11297643 chr2R 11301953 11301982 flea 13 4340 7.0 3.5 5.2 2.1 4370 chr2R 11297612 intergenic CG42336 - chr2R 11299797 intergenic not near genes chr2R 11301982 5` UTR CG7741 + chr2R_13_11295001 chr2R_11295001 RAL-508 729 chr2R 11344146 11344153 chr2R 11344259 11344268 5 115 0.0 1.5 0.8 2.8 122 chr2R 11344146 intergenic alphaTry - chr2R 11344207 intergenic alphaTry - chr2R 11344268 3` UTR alphaTry - chr2R_5_11340001 chr2R_11340001 RAL-508 730 chr2R 11415518 11415548 chr2R 11418666 11418717 opus 10 3160 3.5 5.0 4.2 1.9 3199 chr2R 11415518 intron Drip - chr2R 11417118 intron Drip - chr2R 11418717 intron Drip - chr2R_10_11415001 chr2R_11415001 RAL-508 731 chr2R 11472626 11472679 chr2R 11473845 11473894 pogo 10 1213 4.0 6.0 5.0 1.7 1268 chr2R 11472626 intergenic not near genes chr2R 11473260 intergenic not near genes chr2R 11473894 intergenic not near genes chr2R_10_11470001 chr2R_11470001 RAL-508 732 chr2R 11555376 11555414 chr2R 11555731 11555769 4 355 3.0 2.5 2.8 1.1 393 chr2R 11555376 intergenic not near genes chr2R 11555572 intergenic not near genes chr2R 11555769 intergenic not near genes chr2R_4_11555001 chr2R_11555001 RAL-508 733 chr2R 11631386 11631410 chr2R 11631485 11631508 7 99 0.0 2.5 1.2 3.2 122 chr2R 11631386 intron CG9005 - chr2R 11631447 intron CG9005 - chr2R 11631508 intron CG9005 - chr2R_7_11630001 chr2R_11630001 RAL-508 734 chr2R 11674998 11675012 chr2R 11675091 11675112 8 97 2.5 9.5 6.0 1.1 114 chr2R 11674998 intron Roc2 - chr2R 11675055 intron Roc2 - chr2R 11675112 intron Roc2 - chr2R_8_11675001 chr2R_11675001 RAL-508 735 chr2R 11675016 11675023 chr2R 11675076 11675110 4 86 2.5 7.0 4.8 0.7 94 chr2R 11675016 intron Roc2 - chr2R 11675063 intron Roc2 - chr2R 11675110 intron Roc2 - chr2R_4_11675001 chr2R_11675001 RAL-508 736 chr2R 11672704 11672712 chr2R 11676132 11676151 5 3432 22.5 11.5 17.0 0.3 3447 chr2R 11672704 intron,intron Roc2 -,Tret1-1 + chr2R 11674428 intron,exon Roc2 -,Tret1-1 + chr2R 11676151 intron,intron Roc2 -,Tret1-2 + chr2R_5_11670001 chr2R_11670001 RAL-508 737 chr2R 11677868 11677877 chr2R 11677954 11677972 4 94 7.0 4.0 5.5 0.6 104 chr2R 11677868 intron,exon Roc2 -,Tret1-2 + chr2R 11677920 intron,3` UTR Roc2 -,Tret1-2 + chr2R 11677972 intron,3` UTR Roc2 -,Tret1-2 + chr2R_4_11675001 chr2R_11675001 RAL-508 738 chr2R 11677880 11677885 chr2R 11677949 11677981 7 80 6.0 3.0 4.5 1.3 101 chr2R 11677880 intron,exon Roc2 -,Tret1-2 + chr2R 11677930 intron,3` UTR Roc2 -,Tret1-2 + chr2R 11677981 intron,3` UTR Roc2 -,Tret1-2 + chr2R_7_11675001 chr2R_11675001 RAL-508 739 chr2R 11863842 11863885 chr2R 11863946 11863991 10 106 3.0 2.0 2.5 2.9 149 chr2R 11863842 intergenic CG42531 + chr2R 11863916 intergenic CG42531 + chr2R 11863991 intergenic CG42531 + chr2R_10_11860001 chr2R_11860001 RAL-508 740 chr2R 11934079 11934109 chr2R 11934181 11934211 9 99 2.5 4.0 3.2 2.1 132 chr2R 11934079 intergenic not near genes chr2R 11934145 intergenic not near genes chr2R 11934211 intergenic not near genes chr2R_9_11930001 chr2R_11930001 RAL-508 741 chr2R 11952656 11952690 chr2R 11952738 11952787 7 94 2.0 4.5 3.2 1.7 131 chr2R 11952656 intron CG13188 + chr2R 11952722 intron CG13188 + chr2R 11952787 intron CG13188 + chr2R_7_11950001 chr2R_11950001 RAL-508 742 chr2R 12045996 12046027 chr2R 12046264 12046295 6 268 2.5 1.0 1.8 2.1 299 chr2R 12045996 intron Drep-1 + chr2R 12046146 intron Drep-1 + chr2R 12046295 intron Drep-1 + chr2R_6_12045001 chr2R_12045001 RAL-508 743 chr2R 12104670 12104690 chr2R 12104769 12104789 5 98 9.0 5.0 7.0 0.6 119 chr2R 12104670 intron jeb - chr2R 12104730 intron jeb - chr2R 12104789 intron jeb - chr2R_5_12100001 chr2R_12100001 RAL-508 744 chr2R 12185985 12186031 chr2R 12186100 12186128 13 109 1.5 3.0 2.2 4.1 143 chr2R 12185985 intron Cyp6g1 + chr2R 12186056 intron Cyp6g1 + chr2R 12186128 intron Cyp6g1 + chr2R_13_12185001 chr2R_12185001 RAL-508 745 chr2R 12185223 12185229 chr2R 12188128 12188138 4 2906 25.5 46.0 35.8 0.1 2915 chr2R 12185223 3` UTR,exon CG13175 +,CG33964 + chr2R 12186680 exon Cyp6g1 + chr2R 12188138 3` UTR Cyp6g1 + chr2R_4_12185001 chr2R_12185001 RAL-508 746 chr2R 12217560 12217572 chr2R 12217661 12217673 4 100 7.5 5.0 6.2 0.6 113 chr2R 12217560 intergenic not near genes chr2R 12217616 intergenic not near genes chr2R 12217673 intergenic not near genes chr2R_4_12215001 chr2R_12215001 RAL-508 747 chr2R 12217577 12217602 chr2R 12217659 12217703 9 98 0.5 5.0 2.8 2.4 126 chr2R 12217577 intergenic not near genes chr2R 12217640 intergenic not near genes chr2R 12217703 intergenic not near genes chr2R_9_12215001 chr2R_12215001 RAL-508 748 chr2R 12228354 12228404 chr2R 12228493 12228543 12 138 0.0 2.5 1.2 5.5 189 chr2R 12228354 intron CG8854 - chr2R 12228448 intron CG8854 - chr2R 12228543 intron CG8854 - chr2R_12_12225001 chr2R_12225001 RAL-508 749 chr2R 12284294 12284327 chr2R 12284398 12284431 4 104 0.0 2.5 1.2 1.8 137 chr2R 12284294 intron CG42700 + chr2R 12284362 intron CG42700 + chr2R 12284431 intron CG42700 + chr2R_4_12280001 chr2R_12280001 RAL-508 750 chr2R 12320708 12320728 chr2R 12320987 12321008 9 279 0.0 6.0 3.0 2.2 300 chr2R 12320708 3` UTR CR44316 - chr2R 12320858 intron CR44316 - chr2R 12321008 intergenic CR44316 -,CG13163 + chr2R_9_12320001 chr2R_12320001 RAL-508 751 chr2R 12363363 12363410 chr2R 12363814 12363859 21 450 5.5 3.0 4.2 4.0 496 chr2R 12363363 intergenic CG30043 + chr2R 12363611 intergenic CG30043 + chr2R 12363859 intergenic not near genes chr2R_21_12360001 chr2R_12360001 RAL-508 752 chr2R 12417455 12417484 chr2R 12417542 12417543 8 80 3.0 5.5 4.2 1.5 88 chr2R 12417455 exon CG13157 + chr2R 12417499 exon CG13157 + chr2R 12417543 exon CG13157 + chr2R_8_12415001 chr2R_12415001 RAL-508 753 chr2R 12492080 12492121 chr2R 12492185 12492228 8 109 3.0 2.0 2.5 2.3 148 chr2R 12492080 intron fdl - chr2R 12492154 intron fdl - chr2R 12492228 intron fdl - chr2R_8_12490001 chr2R_12490001 RAL-508 754 chr2R 12501688 12501727 chr2R 12503848 12503885 Rt1c 6 2171 1.0 2.0 1.5 2.4 2197 chr2R 12501688 intron fdl - chr2R 12502786 intron fdl - chr2R 12503885 intron fdl - chr2R_6_12500001 chr2R_12500001 RAL-508 755 chr2R 12504131 12504141 chr2R 12504228 12504238 5 97 14.5 7.0 10.8 0.4 107 chr2R 12504131 intron fdl - chr2R 12504184 intron fdl - chr2R 12504238 intron fdl - chr2R_5_12500001 chr2R_12500001 RAL-508 756 chr2R 12504152 12504178 chr2R 12504222 12504275 13 91 7.5 7.0 7.2 1.6 123 chr2R 12504152 intron fdl - chr2R 12504214 intron fdl - chr2R 12504275 intron fdl - chr2R_13_12500001 chr2R_12500001 RAL-508 757 chr2R 12565277 12565310 chr2R 12565381 12565412 6 104 5.0 0.0 2.5 1.7 135 chr2R 12565277 intergenic CG33775 - chr2R 12565344 intergenic CG33775 - chr2R 12565412 intergenic not near genes chr2R_6_12565001 chr2R_12565001 RAL-508 758 chr2R 12565548 12565594 chr2R 12565946 12565963 4 388 0.0 2.0 1.0 2.0 415 chr2R 12565548 intergenic not near genes chr2R 12565756 intergenic Cyp301a1 + chr2R 12565963 intergenic Cyp301a1 + chr2R_4_12565001 chr2R_12565001 RAL-508 759 chr2R 12611766 12611800 chr2R 12611871 12611909 7 108 5.0 3.0 4.0 1.4 143 chr2R 12611766 3` UTR Amph + chr2R 12611838 3` UTR Amph + chr2R 12611909 3` UTR Amph + chr2R_7_12610001 chr2R_12610001 RAL-508 760 chr2R 12643775 12643791 chr2R 12643872 12643888 6 96 2.0 2.0 2.0 2.0 113 chr2R 12643775 intron CG8785 - chr2R 12643832 intron CG8785 - chr2R 12643888 exon CG8785 - chr2R_6_12640001 chr2R_12640001 RAL-508 761 chr2R 12643794 12643813 chr2R 12643871 12643906 5 90 2.0 2.0 2.0 1.7 112 chr2R 12643794 intron CG8785 - chr2R 12643850 intron CG8785 - chr2R 12643906 exon CG8785 - chr2R_5_12640001 chr2R_12640001 RAL-508 762 chr2R 12663320 12663373 chr2R 12663420 12663473 20 97 4.0 0.5 2.2 6.2 153 chr2R 12663320 intron nemy - chr2R 12663396 intron nemy - chr2R 12663473 intron nemy - chr2R_20_12660001 chr2R_12660001 RAL-508 763 chr2R 12677378 12677408 chr2R 12677482 12677512 5 104 0.0 8.5 4.2 1.0 134 chr2R 12677378 intron CG42708 - chr2R 12677445 intron CG42708 - chr2R 12677512 intron CG42708 - chr2R_5_12675001 chr2R_12675001 RAL-508 764 chr2R 12707516 12707536 chr2R 12715900 12715922 roo 6 8386 1.0 3.0 2.0 2.0 8406 chr2R 12707516 intron CG42663 + chr2R 12711719 intron CG42663 + chr2R 12715922 intron CG42663 + chr2R_6_12710001 chr2R_12710001 RAL-508 765 chr2R 12728852 12728904 chr2R 12728975 12729022 5 119 0.0 2.5 1.2 2.3 170 chr2R 12728852 intron CG42663 + chr2R 12728937 intron CG42663 + chr2R 12729022 intron CG42663 + chr2R_5_12725001 chr2R_12725001 RAL-508 766 chr2R 12739115 12739137 chr2R 12739209 12739220 6 92 8.0 4.5 6.2 0.8 105 chr2R 12739115 intron CG42663 + chr2R 12739168 intron CG42663 + chr2R 12739220 intron CG42663 + chr2R_6_12735001 chr2R_12735001 RAL-508 767 chr2R 12789281 12789328 chr2R 12797663 12797666 roo 6 8370 5.0 3.0 4.0 1.2 8385 chr2R 12789281 intron,3` UTR sca +,CR45137 - chr2R 12793474 intron,intron sca +,CR45137 - chr2R 12797666 intron,3` UTR sca +,CR45137 - chr2R_6_12790001 chr2R_12790001 RAL-508 768 chr2R 12897458 12897477 chr2R 12897557 12897588 9 110 1.0 0.0 0.5 6.0 130 chr2R 12897458 intron vg + chr2R 12897523 intron vg + chr2R 12897588 intron vg + chr2R_9_12895001 chr2R_12895001 RAL-508 769 chr2R 13017717 13017744 chr2R 13017807 13017853 11 108 3.0 0.0 1.5 4.4 136 chr2R 13017717 intergenic not near genes chr2R 13017785 intergenic not near genes chr2R 13017853 intergenic not near genes chr2R_11_13015001 chr2R_13015001 RAL-508 770 chr2R 13078737 13078780 chr2R 13078854 13078877 13 115 3.5 3.5 3.5 2.9 140 chr2R 13078737 intron Drl-2 - chr2R 13078807 intron Drl-2 - chr2R 13078877 intron Drl-2 - chr2R_13_13075001 chr2R_13075001 RAL-508 771 chr2R 13136823 13136868 chr2R 13141640 13141685 Doc 19 4815 4.5 3.0 3.8 4.0 4862 chr2R 13136823 exon Cap-G + chr2R 13139254 intron Cap-G + chr2R 13141685 intron Cap-G + chr2R_19_13135001 chr2R_13135001 RAL-508 772 chr2R 13167410 13167444 chr2R 13167524 13167558 8 114 5.5 0.0 2.8 2.1 148 chr2R 13167410 intron GLaz - chr2R 13167484 intron GLaz - chr2R 13167558 intron GLaz - chr2R_8_13165001 chr2R_13165001 RAL-508 773 chr2R 13364710 13364733 chr2R 13364815 13364839 7 106 3.5 7.0 5.2 1.1 129 chr2R 13364710 intergenic not near genes chr2R 13364774 intergenic not near genes chr2R 13364839 intergenic not near genes chr2R_7_13360001 chr2R_13360001 RAL-508 774 chr2R 13403914 13403919 chr2R 13404015 13404023 5 104 3.5 0.5 2.0 1.7 109 chr2R 13403914 intergenic not near genes chr2R 13403968 intergenic not near genes chr2R 13404023 intergenic not near genes chr2R_5_13400001 chr2R_13400001 RAL-508 775 chr2R 13431836 13431869 chr2R 13431950 13431996 12 125 3.5 6.0 4.8 2.1 160 chr2R 13431836 intron CG42321 - chr2R 13431916 intron CG42321 - chr2R 13431996 intron CG42321 - chr2R_12_13430001 chr2R_13430001 RAL-508 776 chr2R 13439089 13439135 chr2R 13439224 13439269 9 134 3.5 3.0 3.2 2.1 180 chr2R 13439089 intergenic CG42321 -,cnn - chr2R 13439179 intergenic CG42321 -,cnn - chr2R 13439269 intergenic cnn -,CG42321 - chr2R_9_13435001 chr2R_13435001 RAL-508 777 chr2R 13446669 13446704 chr2R 13446770 13446793 6 99 4.5 0.0 2.2 1.9 124 chr2R 13446669 intron cnn - chr2R 13446731 intron cnn - chr2R 13446793 intron cnn - chr2R_6_13445001 chr2R_13445001 RAL-508 778 chr2R 13566238 13566286 chr2R 13566338 13566364 11 97 4.5 0.0 2.2 3.4 126 chr2R 13566238 intergenic not near genes chr2R 13566301 intergenic not near genes chr2R 13566364 intergenic not near genes chr2R_11_13565001 chr2R_13565001 RAL-508 779 chr2R 13573770 13573813 chr2R 13573958 13573988 7 180 6.5 5.0 5.8 1.0 218 chr2R 13573770 3` UTR CG42808 - chr2R 13573879 exon CG42808 - chr2R 13573988 exon CG42808 - chr2R_7_13570001 chr2R_13570001 RAL-508 780 chr2R 13580505 13580519 chr2R 13580852 13580889 jockey 4 358 0.0 6.0 3.0 1.0 384 chr2R 13580505 3` UTR CG6191 - chr2R 13580697 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580889 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_4_13580001 chr2R_13580001 RAL-508 781 chr2R 13631067 13631094 chr2R 13631189 13631216 7 121 4.0 10.5 7.2 0.9 149 chr2R 13631067 intron fas + chr2R 13631142 intron fas + chr2R 13631216 intron fas + chr2R_7_13630001 chr2R_13630001 RAL-508 782 chr2R 13670299 13670348 chr2R 13670498 13670527 28 198 4.5 12.5 8.5 2.9 228 chr2R 13670299 intron,exon fas +,CG18368 + chr2R 13670413 intron,exon fas +,CG18368 + chr2R 13670527 intron,exon fas +,CG18368 + chr2R_28_13670001 chr2R_13670001 RAL-508 783 chr2R 13684246 13684272 chr2R 13684342 13684370 4 92 1.0 1.5 1.2 1.8 124 chr2R 13684246 intron fas + chr2R 13684308 intron fas + chr2R 13684370 intron fas + chr2R_4_13680001 chr2R_13680001 RAL-508 784 chr2R 13709828 13709847 chr2R 13709941 13709958 5 112 5.0 0.5 2.8 1.3 130 chr2R 13709828 intron fas + chr2R 13709893 intron fas + chr2R 13709958 intron fas + chr2R_5_13705001 chr2R_13705001 RAL-508 785 chr2R 13721216 13721226 chr2R 13721289 13721307 5 87 4.0 5.0 4.5 0.9 91 chr2R 13721216 intron fas + chr2R 13721262 intron fas + chr2R 13721307 intron fas + chr2R_5_13720001 chr2R_13720001 RAL-508 786 chr2R 13728115 13728157 chr2R 13735792 13735834 opus 8 7676 3.5 2.5 3.0 2.0 7719 chr2R 13728115 intron fas + chr2R 13731974 intron fas + chr2R 13735834 intron fas + chr2R_8_13730001 chr2R_13730001 RAL-508 787 chr2R 13793130 13793160 chr2R 13793225 13793252 6 94 3.0 4.5 3.8 1.2 122 chr2R 13793130 intergenic not near genes chr2R 13793191 intergenic not near genes chr2R 13793252 intergenic not near genes chr2R_6_13790001 chr2R_13790001 RAL-508 788 chr2R 14000208 14000262 chr2R 14000456 14000510 11 248 1.0 1.0 1.0 5.5 302 chr2R 14000208 intron mam + chr2R 14000359 intron mam + chr2R 14000510 intron mam + chr2R_11_14000001 chr2R_14000001 RAL-508 789 chr2R 14037269 14037298 chr2R 14037372 14037401 4 103 0.0 5.0 2.5 1.1 132 chr2R 14037269 intron mam + chr2R 14037335 intron mam + chr2R 14037401 intron mam + chr2R_4_14035001 chr2R_14035001 RAL-508 790 chr2R 14168346 14168360 chr2R 14168455 14168469 4 108 2.5 0.5 1.5 1.6 123 chr2R 14168346 intergenic CG18327 +,CG18324 +,CR44368 - chr2R 14168408 intergenic CG18327 +,CG18324 +,CR44368 - chr2R 14168469 intergenic CG18327 +,CG18324 +,CR44368 - chr2R_4_14165001 chr2R_14165001 RAL-508 791 chr2R 14438822 14438847 chr2R 14438925 14438951 5 102 3.5 3.0 3.2 1.2 129 chr2R 14438822 intron Oaz + chr2R 14438886 intron Oaz + chr2R 14438951 intron Oaz + chr2R_5_14435001 chr2R_14435001 RAL-508 792 chr2R 14443817 14443830 chr2R 14443919 14443932 7 101 5.0 0.0 2.5 2.0 115 chr2R 14443817 intron Oaz + chr2R 14443874 intron Oaz + chr2R 14443932 intron Oaz + chr2R_7_14440001 chr2R_14440001 RAL-508 793 chr2R 14443831 14443929 chr2R 14443917 14444013 5 96 0.0 0.0 0.0 5.0 182 chr2R 14443831 intron Oaz + chr2R 14443922 intron Oaz + chr2R 14444013 intron Oaz + chr2R_5_14440001 chr2R_14440001 RAL-508 794 chr2R 14467287 14467325 chr2R 14476465 14476503 roo 19 9176 2.5 4.5 3.5 4.2 9216 chr2R 14467287 intergenic not near genes chr2R 14471895 intergenic not near genes chr2R 14476503 5` UTR CR44462 + chr2R_19_14470001 chr2R_14470001 RAL-508 795 chr2R 14497370 14497418 chr2R 14498552 14498577 1360 8 1179 0.0 3.0 1.5 3.2 1207 chr2R 14497370 3` UTR Cpsf160 - chr2R 14497974 intron Cpsf160 - chr2R 14498577 3` UTR Cpsf160 - chr2R_8_14495001 chr2R_14495001 RAL-508 796 chr2R 14530351 14530379 chr2R 14530459 14530488 6 109 6.0 4.5 5.2 1.0 137 chr2R 14530351 intron ttv + chr2R 14530420 intron ttv + chr2R 14530488 intron ttv + chr2R_6_14530001 chr2R_14530001 RAL-508 797 chr2R 14538939 14538983 chr2R 14539034 14539065 6 88 4.0 7.5 5.8 0.9 126 chr2R 14538939 intron ttv + chr2R 14539002 intron ttv + chr2R 14539065 intron ttv + chr2R_6_14535001 chr2R_14535001 RAL-508 798 chr2R 14556143 14556195 chr2R 14556240 14556293 17 96 4.5 4.5 4.5 3.1 150 chr2R 14556143 intron ttv + chr2R 14556218 intron ttv + chr2R 14556293 intron ttv + chr2R_17_14555001 chr2R_14555001 RAL-508 799 chr2R 14565542 14565591 chr2R 14565639 14565688 13 96 1.0 4.5 2.8 3.4 146 chr2R 14565542 intron ttv + chr2R 14565615 intron ttv + chr2R 14565688 intron ttv + chr2R_13_14565001 chr2R_14565001 RAL-508 800 chr2R 14566426 14566476 chr2R 14566533 14566583 19 106 4.0 3.0 3.5 4.2 157 chr2R 14566426 intron ttv + chr2R 14566504 intron ttv + chr2R 14566583 intron ttv + chr2R_19_14565001 chr2R_14565001 RAL-508 801 chr2R 14623878 14623891 chr2R 14623994 14624007 6 116 0.0 7.5 3.8 1.2 129 chr2R 14623878 intron Uhg5 + chr2R 14623942 5` UTR Uhg5 + chr2R 14624007 intron,5` UTR Uhg5 +,snoRNA:Me28S-G2703c + chr2R_6_14620001 chr2R_14620001 RAL-508 802 chr2R 14707050 14707096 chr2R 14707150 14707196 8 100 1.0 0.0 0.5 5.3 146 chr2R 14707050 intron mspo - chr2R 14707123 intron mspo - chr2R 14707196 intron mspo - chr2R_8_14705001 chr2R_14705001 RAL-508 803 chr2R 14728195 14728240 chr2R 14728298 14728332 14 102 2.5 4.0 3.2 3.3 137 chr2R 14728195 intergenic not near genes chr2R 14728264 intergenic not near genes chr2R 14728332 intergenic not near genes chr2R_14_14725001 chr2R_14725001 RAL-508 804 chr2R 14729944 14729968 chr2R 14730048 14730072 5 104 2.5 1.5 2.0 1.7 128 chr2R 14729944 intergenic not near genes chr2R 14730008 intergenic not near genes chr2R 14730072 intergenic not near genes chr2R_5_14730001 chr2R_14730001 RAL-508 805 chr2R 14799870 14799893 chr2R 14799966 14799989 4 96 1.0 6.0 3.5 0.9 119 chr2R 14799870 intron kn - chr2R 14799930 intron kn - chr2R 14799989 intron kn - chr2R_4_14795001 chr2R_14795001 RAL-508 806 chr2R 14820881 14820932 chr2R 14820988 14821039 10 107 4.5 5.0 4.8 1.7 158 chr2R 14820881 intergenic not near genes chr2R 14820960 intergenic not near genes chr2R 14821039 intergenic not near genes chr2R_10_14820001 chr2R_14820001 RAL-508 807 chr2R 14850056 14850086 chr2R 14850173 14850212 13 124 22.0 24.0 23.0 0.5 156 chr2R 14850056 exon SMC2 - chr2R 14850134 intron SMC2 - chr2R 14850212 exon SMC2 - chr2R_13_14850001 chr2R_14850001 RAL-508 808 chr2R 14889195 14889220 chr2R 14897823 14897843 Max-element 15 8627 11.0 0.0 5.5 2.3 8648 chr2R 14889195 intergenic Cyp6a8 - chr2R 14893519 intergenic not near genes chr2R 14897843 intergenic not near genes chr2R_15_14890001 chr2R_14890001 RAL-508 809 chr2R 14911682 14911726 chr2R 14911824 14911867 10 143 3.0 1.0 2.0 3.3 185 chr2R 14911682 intron CG10249 - chr2R 14911774 intron CG10249 - chr2R 14911867 intron CG10249 - chr2R_10_14910001 chr2R_14910001 RAL-508 810 chr2R 14917222 14917268 chr2R 14917333 14917374 6 106 7.0 1.0 4.0 1.2 152 chr2R 14917222 intron CG10249 - chr2R 14917298 intron CG10249 - chr2R 14917374 intron CG10249 - chr2R_6_14915001 chr2R_14915001 RAL-508 811 chr2R 14917633 14917686 chr2R 14917836 14917878 9 196 2.0 2.5 2.2 2.8 245 chr2R 14917633 intron CG10249 - chr2R 14917756 intron CG10249 - chr2R 14917878 intron CG10249 - chr2R_9_14915001 chr2R_14915001 RAL-508 812 chr2R 14922130 14922173 chr2R 14922226 14922268 15 95 3.0 6.0 4.5 2.7 138 chr2R 14922130 intron CG10249 - chr2R 14922199 intron CG10249 - chr2R 14922268 intron CG10249 - chr2R_15_14920001 chr2R_14920001 RAL-508 813 chr2R 14968044 14968085 chr2R 14968143 14968182 5 98 0.0 0.5 0.2 4.2 138 chr2R 14968044 intron ckn + chr2R 14968113 intron ckn + chr2R 14968182 intron ckn + chr2R_5_14965001 chr2R_14965001 RAL-508 814 chr2R 14968453 14968472 chr2R 14968535 14968565 11 93 4.0 9.0 6.5 1.5 112 chr2R 14968453 intron ckn + chr2R 14968509 intron ckn + chr2R 14968565 intron ckn + chr2R_11_14965001 chr2R_14965001 RAL-508 815 chr2R 14987775 14987815 chr2R 14987908 14987951 14 136 38.0 39.5 38.8 0.4 176 chr2R 14987775 intron,3` UTR pcs +,CG7639 - chr2R 14987863 intron,3` UTR pcs +,CG7639 - chr2R 14987951 intron,exon pcs +,CG7639 - chr2R_14_14985001 chr2R_14985001 RAL-508 816 chr2R 15068160 15068199 chr2R 15068284 15068291 12 117 3.0 3.5 3.2 2.9 131 chr2R 15068160 intergenic not near genes chr2R 15068226 intergenic not near genes chr2R 15068291 intergenic not near genes chr2R_12_15065001 chr2R_15065001 RAL-508 817 chr2R 15084967 15085003 chr2R 15092033 15092072 297 6 7068 3.0 4.0 3.5 1.3 7105 chr2R 15084967 intergenic not near genes chr2R 15088520 intergenic not near genes chr2R 15092072 5` UTR CR44457 + chr2R_6_15085001 chr2R_15085001 RAL-508 818 chr2R 15094866 15094915 chr2R 15094963 15095012 13 96 4.5 5.0 4.8 2.2 146 chr2R 15094866 intergenic not near genes chr2R 15094939 intergenic not near genes chr2R 15095012 intergenic not near genes chr2R_13_15090001 chr2R_15090001 RAL-508 819 chr2R 15119317 15119340 chr2R 15127818 15127827 Tirant 5 8494 6.5 2.5 4.5 0.9 8510 chr2R 15119317 intron chn + chr2R 15123572 intron chn + chr2R 15127827 intron chn + chr2R_5_15120001 chr2R_15120001 RAL-508 820 chr2R 15133418 15133460 chr2R 15133554 15133581 17 134 2.5 5.0 3.8 3.5 163 chr2R 15133418 intron chn + chr2R 15133500 intron chn + chr2R 15133581 intron chn + chr2R_17_15130001 chr2R_15130001 RAL-508 821 chr2R 15137951 15137996 chr2R 15138050 15138093 11 99 5.0 0.0 2.5 3.1 142 chr2R 15137951 intron chn + chr2R 15138022 intron chn + chr2R 15138093 intron chn + chr2R_11_15135001 chr2R_15135001 RAL-508 822 chr2R 15196072 15196116 chr2R 15196187 15196229 17 115 3.5 3.0 3.2 4.0 157 chr2R 15196072 intergenic not near genes chr2R 15196150 intergenic not near genes chr2R 15196229 intergenic not near genes chr2R_17_15195001 chr2R_15195001 RAL-508 823 chr2R 15333936 15333954 chr2R 15334096 15334134 5 176 0.5 3.5 2.0 1.7 198 chr2R 15333936 exon Hr51 + chr2R 15334035 intron Hr51 + chr2R 15334134 intron Hr51 + chr2R_5_15330001 chr2R_15330001 RAL-508 824 chr2R 15375059 15375070 chr2R 15375187 15375199 5 129 3.0 0.0 1.5 2.0 140 chr2R 15375059 intergenic not near genes chr2R 15375129 intergenic not near genes chr2R 15375199 intergenic not near genes chr2R_5_15375001 chr2R_15375001 RAL-508 825 chr2R 15375341 15375359 chr2R 15376178 15376196 4 837 2.5 5.0 3.8 0.8 855 chr2R 15375341 intergenic not near genes chr2R 15375768 intergenic not near genes chr2R 15376196 intergenic dup - chr2R_4_15375001 chr2R_15375001 RAL-508 826 chr2R 15410760 15410796 chr2R 15410972 15411007 6 208 6.0 3.5 4.8 1.0 247 chr2R 15410760 intron CG43729 + chr2R 15410884 intron CG43729 + chr2R 15411007 intron CG43729 + chr2R_6_15410001 chr2R_15410001 RAL-508 827 chr2R 15534659 15534692 chr2R 15534758 15534791 7 97 4.5 0.5 2.5 2.0 132 chr2R 15534659 intron CG30471 + chr2R 15534725 intron CG30471 + chr2R 15534791 intron CG30471 + chr2R_7_15530001 chr2R_15530001 RAL-508 828 chr2R 15573010 15573049 chr2R 15573141 15573154 4 125 4.0 0.0 2.0 1.3 144 chr2R 15573010 3` UTR CG30466 + chr2R 15573082 3` UTR CG30466 + chr2R 15573154 3` UTR,3` UTR CG30466 +,CG8204 - chr2R_4_15570001 chr2R_15570001 RAL-508 829 chr2R 15606117 15606124 chr2R 15606214 15606217 4 96 7.0 3.5 5.2 0.6 100 chr2R 15606117 intergenic not near genes chr2R 15606167 intergenic not near genes chr2R 15606217 intergenic not near genes chr2R_4_15605001 chr2R_15605001 RAL-508 830 chr2R 15645765 15645808 chr2R 15645960 15646004 11 195 26.0 25.5 25.8 0.4 239 chr2R 15645765 intron CG42524 + chr2R 15645884 intron CG42524 + chr2R 15646004 intron CG42524 + chr2R_11_15645001 chr2R_15645001 RAL-508 831 chr2R 15679099 15679130 chr2R 15679203 15679234 5 104 2.5 1.0 1.8 1.8 135 chr2R 15679099 intergenic CG8207 -,Vha14-1 - chr2R 15679166 intergenic CG8207 -,Vha14-1 - chr2R 15679234 intergenic Vha14-1 -,CG8207 - chr2R_5_15675001 chr2R_15675001 RAL-508 832 chr2R 15700236 15700272 chr2R 15700351 15700387 10 114 4.5 4.0 4.2 1.9 151 chr2R 15700236 intron,5` UTR CG30080 -,CG42662 - chr2R 15700312 intron,5` UTR CG30080 -,CG42662 - chr2R 15700387 intron,5` UTR CG30080 -,CG42662 - chr2R_10_15700001 chr2R_15700001 RAL-508 833 chr2R 15723580 15723627 chr2R 15723695 15723742 14 112 3.0 2.5 2.8 3.7 162 chr2R 15723580 intergenic not near genes chr2R 15723661 intergenic not near genes chr2R 15723742 intergenic not near genes chr2R_14_15720001 chr2R_15720001 RAL-508 834 chr2R 15833506 15833558 chr2R 15833613 15833628 18 96 3.0 4.5 3.8 3.8 122 chr2R 15833506 intron,intron tun +,Poxn - chr2R 15833567 intron,intron tun +,Poxn - chr2R 15833628 intron,intron tun +,Poxn - chr2R_18_15830001 chr2R_15830001 RAL-508 835 chr2R 15891799 15891834 chr2R 15891895 15891930 5 96 1.5 3.0 2.2 1.6 131 chr2R 15891799 intron sli - chr2R 15891864 intron sli - chr2R 15891930 intron sli - chr2R_5_15890001 chr2R_15890001 RAL-508 836 chr2R 15951836 15951853 chr2R 15951931 15951947 5 95 0.0 4.0 2.0 1.7 111 chr2R 15951836 intron Strn-Mlck - chr2R 15951892 intron Strn-Mlck - chr2R 15951947 intron Strn-Mlck - chr2R_5_15950001 chr2R_15950001 RAL-508 837 chr2R 16033486 16033510 chr2R 16033593 16033617 5 107 6.0 0.0 3.0 1.2 131 chr2R 16033486 intron SP2353 + chr2R 16033552 intron SP2353 + chr2R 16033617 intron SP2353 + chr2R_5_16030001 chr2R_16030001 RAL-508 838 chr2R 16245406 16245427 chr2R 16245519 16245541 6 114 3.5 5.0 4.2 1.2 135 chr2R 16245406 intron CngA - chr2R 16245474 intron CngA - chr2R 16245541 intron CngA - chr2R_6_16245001 chr2R_16245001 RAL-508 839 chr2R 16380103 16380144 chr2R 16380221 16380262 17 115 3.5 1.0 2.2 5.3 159 chr2R 16380103 5` UTR,3` UTR CR45316 +,CR45317 - chr2R 16380182 3` UTR CR45317 - chr2R 16380262 intergenic CR45317 -,CR45316 +,CG43187 + chr2R_17_16380001 chr2R_16380001 RAL-508 840 chr2R 16518031 16518035 chr2R 16518127 16518131 4 96 4.5 3.5 4.0 0.8 100 chr2R 16518031 intron Sema-2a + chr2R 16518081 intron Sema-2a + chr2R 16518131 intron Sema-2a + chr2R_4_16515001 chr2R_16515001 RAL-508 841 chr2R 16518037 16518067 chr2R 16518125 16518163 5 94 3.0 3.5 3.2 1.2 126 chr2R 16518037 intron Sema-2a + chr2R 16518100 intron Sema-2a + chr2R 16518163 intron Sema-2a + chr2R_5_16515001 chr2R_16515001 RAL-508 842 chr2R 16544847 16544865 chr2R 16544952 16544970 4 105 0.0 0.0 0.0 4.0 123 chr2R 16544847 intergenic not near genes chr2R 16544908 intergenic not near genes chr2R 16544970 intergenic not near genes chr2R_4_16540001 chr2R_16540001 RAL-508 843 chr2R 16614116 16614152 chr2R 16614354 16614391 9 239 4.0 5.0 4.5 1.6 275 chr2R 16614116 intron CG5065 + chr2R 16614254 intron CG5065 + chr2R 16614391 intron CG5065 + chr2R_9_16610001 chr2R_16610001 RAL-508 844 chr2R 16618699 16618705 chr2R 16618794 16618801 5 96 0.0 4.5 2.2 1.6 102 chr2R 16618699 intron CG5065 + chr2R 16618750 intron CG5065 + chr2R 16618801 intron CG5065 + chr2R_5_16615001 chr2R_16615001 RAL-508 845 chr2R 16618725 16618746 chr2R 16618792 16618839 11 92 0.5 4.0 2.2 3.4 114 chr2R 16618725 intron CG5065 + chr2R 16618782 intron CG5065 + chr2R 16618839 5` UTR CG5065 + chr2R_11_16615001 chr2R_16615001 RAL-508 846 chr2R 16723909 16723942 chr2R 16724009 16724042 6 100 3.0 2.0 2.5 1.7 133 chr2R 16723909 intron CG30463 - chr2R 16723976 intron CG30463 - chr2R 16724042 intron CG30463 - chr2R_6_16720001 chr2R_16720001 RAL-508 847 chr2R 16737120 16737165 chr2R 16737240 16737285 10 119 5.0 5.5 5.2 1.6 165 chr2R 16737120 3` UTR CG43104 - chr2R 16737202 3` UTR CG43104 - chr2R 16737285 exon CG43104 - chr2R_10_16735001 chr2R_16735001 RAL-508 848 chr2R 16740873 16740918 chr2R 16740987 16741024 7 103 4.0 5.0 4.5 1.3 151 chr2R 16740873 intergenic not near genes chr2R 16740948 intergenic not near genes chr2R 16741024 intergenic not near genes chr2R_7_16740001 chr2R_16740001 RAL-508 849 chr2R 16902740 16902792 chr2R 16902881 16902932 20 140 4.0 5.5 4.8 3.4 192 chr2R 16902740 intergenic not near genes chr2R 16902836 intergenic not near genes chr2R 16902932 intergenic not near genes chr2R_20_16900001 chr2R_16900001 RAL-508 850 chr2R 16933318 16933360 chr2R 16933437 16933479 9 118 3.0 2.5 2.8 2.4 161 chr2R 16933318 intron Pkc53E + chr2R 16933398 intron Pkc53E + chr2R 16933479 intron Pkc53E + chr2R_9_16930001 chr2R_16930001 RAL-508 851 chr2R 16960765 16960801 chr2R 16960897 16960921 8 129 4.0 3.5 3.8 1.7 156 chr2R 16960765 intergenic not near genes chr2R 16960843 intergenic not near genes chr2R 16960921 intergenic not near genes chr2R_8_16960001 chr2R_16960001 RAL-508 852 chr2R 16966136 16966186 chr2R 16966234 16966284 18 97 8.0 5.0 6.5 2.4 148 chr2R 16966136 intergenic not near genes chr2R 16966210 intergenic not near genes chr2R 16966284 intergenic not near genes chr2R_18_16965001 chr2R_16965001 RAL-508 853 chr2R 16966385 16966397 chr2R 16967254 16967266 4 870 5.5 4.0 4.8 0.7 881 chr2R 16966385 intergenic not near genes chr2R 16966826 intergenic not near genes chr2R 16967266 intergenic not near genes chr2R_4_16965001 chr2R_16965001 RAL-508 854 chr2R 17000076 17000130 chr2R 17000181 17000236 12 100 1.5 2.5 2.0 4.0 160 chr2R 17000076 exon ste24b - chr2R 17000156 intergenic ste24b -,ste24a - chr2R 17000236 intergenic ste24a -,ste24b - chr2R_12_17000001 chr2R_17000001 RAL-508 855 chr2R 17048627 17048652 chr2R 17048725 17048750 6 98 3.5 2.5 3.0 1.5 123 chr2R 17048627 3` UTR CG9642 + chr2R 17048688 3` UTR CG9642 + chr2R 17048750 3` UTR CG9642 + chr2R_6_17045001 chr2R_17045001 RAL-508 856 chr2R 17147224 17147263 chr2R 17152275 17152313 jockey 10 5049 3.5 7.5 5.5 1.5 5089 chr2R 17147224 intergenic not near genes chr2R 17149768 intergenic not near genes chr2R 17152313 intergenic not near genes chr2R_10_17145001 chr2R_17145001 RAL-508 857 chr2R 17161334 17161355 chr2R 17161561 17161579 4 226 3.0 0.0 1.5 1.6 245 chr2R 17161334 intergenic not near genes chr2R 17161456 intergenic not near genes chr2R 17161579 intergenic not near genes chr2R_4_17160001 chr2R_17160001 RAL-508 858 chr2R 17183435 17183459 chr2R 17183533 17183571 5 100 4.0 0.0 2.0 1.7 136 chr2R 17183435 intergenic not near genes chr2R 17183503 intergenic not near genes chr2R 17183571 intergenic not near genes chr2R_5_17180001 chr2R_17180001 RAL-508 859 chr2R 17236488 17236529 chr2R 17241710 17241752 copia 8 5222 5.0 3.0 4.0 1.6 5264 chr2R 17236488 intron mbl + chr2R 17239120 intron mbl + chr2R 17241752 intron mbl + chr2R_8_17235001 chr2R_17235001 RAL-508 860 chr2R 17252246 17252293 chr2R 17252352 17252399 17 103 3.5 7.0 5.2 2.7 153 chr2R 17252246 intron mbl + chr2R 17252322 intron mbl + chr2R 17252399 intron mbl + chr2R_17_17250001 chr2R_17250001 RAL-508 861 chr2R 17389261 17389277 chr2R 17389362 17389371 5 103 6.5 6.0 6.2 0.7 110 chr2R 17389261 intergenic CR44344 - chr2R 17389316 intergenic CR44344 - chr2R 17389371 intergenic CR44344 - chr2R_5_17385001 chr2R_17385001 RAL-508 862 chr2R 17389280 17389304 chr2R 17389357 17389388 4 94 3.5 6.0 4.8 0.7 108 chr2R 17389280 intergenic CR44344 - chr2R 17389334 intergenic CR44344 - chr2R 17389388 intergenic CR44344 - chr2R_4_17385001 chr2R_17385001 RAL-508 863 chr2R 17419918 17419923 chr2R 17420022 17420027 4 104 1.0 2.5 1.8 1.4 109 chr2R 17419918 5` UTR cnk - chr2R 17419972 5` UTR cnk - chr2R 17420027 intergenic cnk -,l(2)k01209 + chr2R_4_17415001 chr2R_17415001 RAL-508 864 chr2R 17443771 17443803 chr2R 17443867 17443899 5 96 2.0 4.0 3.0 1.2 128 chr2R 17443771 intron EDTP - chr2R 17443835 intron EDTP - chr2R 17443899 intron EDTP - chr2R_5_17440001 chr2R_17440001 RAL-508 865 chr2R 17470308 17470332 chr2R 17470407 17470432 4 100 4.0 1.5 2.8 1.1 124 chr2R 17470308 intron qkr54B + chr2R 17470370 intron qkr54B + chr2R 17470432 intron qkr54B + chr2R_4_17470001 chr2R_17470001 RAL-508 866 chr2R 17470335 17470349 chr2R 17470399 17470448 4 90 3.0 1.0 2.0 1.3 113 chr2R 17470335 intron qkr54B + chr2R 17470392 intron qkr54B + chr2R 17470448 intron qkr54B + chr2R_4_17470001 chr2R_17470001 RAL-508 867 chr2R 17485895 17485951 chr2R 17490677 17490730 F-element 11 4780 3.5 0.0 1.8 3.9 4835 chr2R 17485895 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488312 intron NT5E-2 + chr2R 17490730 intron NT5E-2 + chr2R_11_17485001 chr2R_17485001 RAL-508 868 chr2R 17510848 17510858 chr2R 17511060 17511070 5 212 2.5 3.5 3.0 1.2 222 chr2R 17510848 3` UTR CG34193 + chr2R 17510959 3` UTR CG34193 + chr2R 17511070 3` UTR CG34193 + chr2R_5_17510001 chr2R_17510001 RAL-508 869 chr2R 17616961 17617006 chr2R 17617059 17617104 17 97 2.5 3.0 2.8 4.5 143 chr2R 17616961 intron,3` UTR CG10936 -,CG44403 - chr2R 17617032 intron,3` UTR CG10936 -,CG44403 - chr2R 17617104 intron,3` UTR CG10936 -,CG44403 - chr2R_17_17615001 chr2R_17615001 RAL-508 870 chr2R 17627731 17627785 chr2R 17628078 17628132 16 346 3.0 5.0 4.0 3.2 401 chr2R 17627731 intron CG10936 - chr2R 17627932 intron CG10936 - chr2R 17628132 intron CG10936 - chr2R_16_17625001 chr2R_17625001 RAL-508 871 chr2R 17635581 17635632 chr2R 17635752 17635803 10 170 0.0 2.5 1.2 4.5 222 chr2R 17635581 intron CG10936 - chr2R 17635692 intron CG10936 - chr2R 17635803 intron CG10936 - chr2R_10_17635001 chr2R_17635001 RAL-508 872 chr2R 17708378 17708405 chr2R 17708478 17708506 5 100 2.5 2.5 2.5 1.4 128 chr2R 17708378 intron CG6424 - chr2R 17708442 intron CG6424 - chr2R 17708506 intron CG6424 - chr2R_5_17705001 chr2R_17705001 RAL-508 873 chr2R 17709975 17710115 chr2R 17710086 17710213 13 101 1.0 1.0 1.0 6.5 238 chr2R 17709975 intron CG6424 - chr2R 17710094 intron CG6424 - chr2R 17710213 intron CG6424 - chr2R_13_17710001 chr2R_17710001 RAL-508 874 chr2R 17745269 17745311 chr2R 17745670 17745713 6 396 3.5 6.5 5.0 1.0 444 chr2R 17745269 exon Ir54a + chr2R 17745491 exon Ir54a + chr2R 17745713 exon,3` UTR Ir54a +,sub - chr2R_6_17745001 chr2R_17745001 RAL-508 875 chr2R 17782346 17782377 chr2R 17783569 17783592 pogo 7 1222 2.0 4.5 3.2 1.7 1246 chr2R 17782346 intergenic CG33981 -,fab1 - chr2R 17782969 intergenic not near genes chr2R 17783592 intergenic mir-31a - chr2R_7_17780001 chr2R_17780001 RAL-508 876 chr2R 17784006 17784053 chr2R 17784267 17784287 pogo 15 256 3.5 4.0 3.8 3.1 281 chr2R 17784006 intergenic mir-31a - chr2R 17784146 intergenic mir-31a - chr2R 17784287 intergenic mir-31a - chr2R_15_17780001 chr2R_17780001 RAL-508 877 chr2R 17807941 17807962 chr2R 17808059 17808078 4 116 3.0 6.0 4.5 0.7 137 chr2R 17807941 intron grh + chr2R 17808010 intron grh + chr2R 17808078 intron grh + chr2R_4_17805001 chr2R_17805001 RAL-508 878 chr2R 17835011 17835062 chr2R 17835124 17835176 8 106 1.5 4.5 3.0 2.0 165 chr2R 17835011 intron grh + chr2R 17835094 intron grh + chr2R 17835176 intron grh + chr2R_8_17835001 chr2R_17835001 RAL-508 879 chr2R 17843187 17843237 chr2R 17843294 17843345 5 108 0.0 1.0 0.5 3.3 158 chr2R 17843187 intergenic olf186-F + chr2R 17843266 intergenic olf186-F + chr2R 17843345 intergenic olf186-F + chr2R_5_17840001 chr2R_17840001 RAL-508 880 chr2R 17849777 17849827 chr2R 17849962 17850004 5 176 0.0 3.5 1.8 1.8 227 chr2R 17849777 intron olf186-F + chr2R 17849890 intron olf186-F + chr2R 17850004 intron olf186-F + chr2R_5_17845001 chr2R_17845001 RAL-508 881 chr2R 17872895 17872938 chr2R 17873272 17873316 25 377 5.0 6.5 5.8 3.7 421 chr2R 17872895 intergenic not near genes chr2R 17873106 intergenic not near genes chr2R 17873316 intergenic not near genes chr2R_25_17870001 chr2R_17870001 RAL-508 882 chr2R 17898725 17898771 chr2R 17898834 17898877 5 107 0.5 1.0 0.8 2.8 152 chr2R 17898725 intron Elk + chr2R 17898801 intron Elk + chr2R 17898877 intron Elk + chr2R_5_17895001 chr2R_17895001 RAL-508 883 chr2R 17929111 17929149 chr2R 17929223 17929254 9 107 1.5 4.0 2.8 2.4 143 chr2R 17929111 intergenic not near genes chr2R 17929182 intergenic not near genes chr2R 17929254 intergenic not near genes chr2R_9_17925001 chr2R_17925001 RAL-508 884 chr2R 17971028 17971038 chr2R 17971204 17971207 6 174 4.0 3.0 3.5 1.3 179 chr2R 17971028 intergenic not near genes chr2R 17971118 intergenic not near genes chr2R 17971207 intergenic not near genes chr2R_6_17970001 chr2R_17970001 RAL-508 885 chr2R 17982912 17982917 chr2R 17983017 17983022 4 105 7.0 4.0 5.5 0.6 110 chr2R 17982912 intron dpr13 - chr2R 17982967 intron dpr13 - chr2R 17983022 intron dpr13 - chr2R_4_17980001 chr2R_17980001 RAL-508 886 chr2R 17982919 17982953 chr2R 17983009 17983056 18 97 2.5 3.0 2.8 4.7 137 chr2R 17982919 intron dpr13 - chr2R 17982988 intron dpr13 - chr2R 17983056 intron dpr13 - chr2R_18_17980001 chr2R_17980001 RAL-508 887 chr2R 18013947 18013978 chr2R 18014026 18014073 18 90 1.0 3.5 2.2 5.6 126 chr2R 18013947 intergenic not near genes chr2R 18014010 intergenic not near genes chr2R 18014073 intergenic not near genes chr2R_18_18010001 chr2R_18010001 RAL-508 888 chr2R 18045653 18045689 chr2R 18046025 18046059 jockey 7 371 2.0 2.0 2.0 2.3 406 chr2R 18045653 intergenic not near genes chr2R 18045856 intergenic not near genes chr2R 18046059 intergenic CG5767 - chr2R_7_18045001 chr2R_18045001 RAL-508 889 chr2R 18076036 18076064 chr2R 18076134 18076188 5 107 2.5 3.5 3.0 1.2 152 chr2R 18076036 intron CG34386 + chr2R 18076112 intron CG34386 + chr2R 18076188 intron CG34386 + chr2R_5_18075001 chr2R_18075001 RAL-508 890 chr2R 18111691 18111713 chr2R 18115579 18115601 F-element 7 3888 2.0 2.5 2.2 2.2 3910 chr2R 18111691 intergenic not near genes chr2R 18113646 intergenic not near genes chr2R 18115601 intergenic not near genes chr2R_7_18110001 chr2R_18110001 RAL-508 891 chr2R 18171477 18171520 chr2R 18171636 18171679 14 158 9.5 3.5 6.5 1.9 202 chr2R 18171477 intron Dgp-1 - chr2R 18171578 intron Dgp-1 - chr2R 18171679 intron Dgp-1 - chr2R_14_18170001 chr2R_18170001 RAL-508 892 chr2R 18265617 18265652 chr2R 18265727 18265751 9 108 1.5 2.5 2.0 3.0 134 chr2R 18265617 intergenic not near genes chr2R 18265684 intergenic not near genes chr2R 18265751 intergenic not near genes chr2R_9_18265001 chr2R_18265001 RAL-508 893 chr2R 18289413 18289456 chr2R 18289532 18289555 8 111 1.0 2.0 1.5 3.2 142 chr2R 18289413 intron,intron sbb -,CG14502 + chr2R 18289484 intron,intron sbb -,CG14502 + chr2R 18289555 exon,intron sbb -,CG14502 + chr2R_8_18285001 chr2R_18285001 RAL-508 894 chr2R 18358374 18358417 chr2R 18372605 18372649 roo 8 14231 5.0 6.5 5.8 1.2 14275 chr2R 18358374 intergenic not near genes chr2R 18365512 intergenic not near genes chr2R 18372649 intergenic not near genes chr2R_8_18365001 chr2R_18365001 RAL-508 895 chr2R 18390849 18390864 chr2R 18390957 18390972 6 107 0.5 1.5 1.0 3.0 123 chr2R 18390849 intergenic CG15068 - chr2R 18390910 intergenic CG15068 - chr2R 18390972 intergenic CG15068 - chr2R_6_18390001 chr2R_18390001 RAL-508 896 chr2R 18398143 18398191 chr2R 18398257 18398305 4 114 1.5 1.0 1.2 1.8 162 chr2R 18398143 intron GstE10 - chr2R 18398224 intron GstE10 - chr2R 18398305 intron GstE10 - chr2R_4_18395001 chr2R_18395001 RAL-508 897 chr2R 18405731 18405781 chr2R 18405832 18405882 4 101 2.5 2.5 2.5 1.1 151 chr2R 18405731 intergenic GstE6 +,GstE5 + chr2R 18405806 intergenic GstE6 +,GstE5 + chr2R 18405882 intergenic GstE6 + chr2R_4_18405001 chr2R_18405001 RAL-508 898 chr2R 18407218 18407258 chr2R 18407319 18407340 13 97 4.5 7.0 5.8 1.9 122 chr2R 18407218 exon GstE7 + chr2R 18407279 exon GstE7 + chr2R 18407340 exon GstE7 + chr2R_13_18405001 chr2R_18405001 RAL-508 899 chr2R 18487827 18487853 chr2R 18495289 18495342 blood 5 7475 0.5 4.5 2.5 1.4 7515 chr2R 18487827 intron CG30116 - chr2R 18491584 intron CG30116 - chr2R 18495342 intron CG30116 - chr2R_5_18490001 chr2R_18490001 RAL-508 900 chr2R 18528172 18528212 chr2R 18528277 18528278 12 98 6.0 3.0 4.5 2.2 106 chr2R 18528172 intron CG10924 + chr2R 18528225 intron CG10924 + chr2R 18528278 intron CG10924 + chr2R_12_18525001 chr2R_18525001 RAL-508 901 chr2R 18575803 18575828 chr2R 18581984 18582036 3S18 7 6184 2.5 5.0 3.8 1.5 6233 chr2R 18575803 intron GEFmeso - chr2R 18578920 intron GEFmeso - chr2R 18582036 intron GEFmeso - chr2R_7_18575001 chr2R_18575001 RAL-508 902 chr2R 18590848 18590901 chr2R 18600018 18600071 roo 9 9170 4.0 2.5 3.2 2.1 9223 chr2R 18590848 intron GEFmeso - chr2R 18595460 intron GEFmeso - chr2R 18600071 intron GEFmeso - chr2R_9_18595001 chr2R_18595001 RAL-508 903 chr2R 18608612 18608654 chr2R 18608707 18608750 8 85 5.5 3.5 4.5 1.5 138 chr2R 18608612 intron GEFmeso - chr2R 18608681 intron GEFmeso - chr2R 18608750 intron GEFmeso - chr2R_8_18605001 chr2R_18605001 RAL-508 904 chr2R 18675159 18675163 chr2R 18675257 18675261 4 98 0.0 9.5 4.8 0.7 102 chr2R 18675159 intergenic not near genes chr2R 18675210 intergenic not near genes chr2R 18675261 intergenic not near genes chr2R_4_18675001 chr2R_18675001 RAL-508 905 chr2R 18692881 18692910 chr2R 18692988 18692993 8 103 4.0 1.0 2.5 2.3 112 chr2R 18692881 intron Sik3 + chr2R 18692937 intron Sik3 + chr2R 18692993 intron Sik3 + chr2R_8_18690001 chr2R_18690001 RAL-508 906 chr2R 18713224 18713260 chr2R 18713319 18713337 7 88 4.0 3.5 3.8 1.5 113 chr2R 18713224 intergenic not near genes chr2R 18713280 intergenic not near genes chr2R 18713337 intergenic not near genes chr2R_7_18710001 chr2R_18710001 RAL-508 907 chr2R 18726876 18727078 chr2R 18726970 18727269 20 123 10.5 1.5 6.0 2.9 393 chr2R 18726876 intron Hs3st-A + chr2R 18727072 intron Hs3st-A + chr2R 18727269 intron Hs3st-A + chr2R_20_18725001 chr2R_18725001 RAL-508 908 chr2R 18727078 18727106 chr2R 18727270 18727298 7 192 4.5 2.5 3.5 1.6 220 chr2R 18727078 intron Hs3st-A + chr2R 18727188 intron Hs3st-A + chr2R 18727298 intron Hs3st-A + chr2R_7_18725001 chr2R_18725001 RAL-508 909 chr2R 18738198 18738239 chr2R 18738294 18738335 14 96 0.0 1.0 0.5 9.3 137 chr2R 18738198 intron Hs3st-A + chr2R 18738266 intron Hs3st-A + chr2R 18738335 intron Hs3st-A + chr2R_14_18735001 chr2R_18735001 RAL-508 910 chr2R 18827695 18827715 chr2R 18827795 18827812 4 99 4.5 4.5 4.5 0.7 117 chr2R 18827695 intron CG15097 - chr2R 18827754 intron CG15097 - chr2R 18827812 intron CG15097 - chr2R_4_18825001 chr2R_18825001 RAL-508 911 chr2R 18830385 18830410 chr2R 18830465 18830484 6 86 3.5 5.0 4.2 1.2 99 chr2R 18830385 5` UTR CG15082 + chr2R 18830434 5` UTR CG15082 + chr2R 18830484 5` UTR CG15082 + chr2R_6_18830001 chr2R_18830001 RAL-508 912 chr2R 18835882 18835897 chr2R 18835980 18835999 5 101 7.5 0.0 3.8 1.0 117 chr2R 18835882 intron CG15083 + chr2R 18835940 intron CG15083 + chr2R 18835999 intron CG15083 + chr2R_5_18835001 chr2R_18835001 RAL-508 913 chr2R 18862292 18862406 chr2R 18862399 18862511 5 108 0.0 0.0 0.0 5.0 219 chr2R 18862292 intergenic Jheh3 - chr2R 18862402 intergenic Jheh3 -,CG43069 + chr2R 18862511 intergenic CG43069 +,Jheh3 - chr2R_5_18860001 chr2R_18860001 RAL-508 914 chr2R 18871629 18871671 chr2R 18871734 18871744 12 102 4.0 2.5 3.2 2.9 115 chr2R 18871629 intergenic not near genes chr2R 18871686 intergenic not near genes chr2R 18871744 intergenic not near genes chr2R_12_18870001 chr2R_18870001 RAL-508 915 chr2R 18930432 18930464 chr2R 18930545 18930577 10 113 4.5 2.0 3.2 2.4 145 chr2R 18930432 intron sano + chr2R 18930504 intron sano + chr2R 18930577 intron sano + chr2R_10_18930001 chr2R_18930001 RAL-508 916 chr2R 18988796 18989044 chr2R 18988906 18989142 10 99 0.5 0.0 0.2 8.3 346 chr2R 18988796 intron tn + chr2R 18988969 intron tn + chr2R 18989142 intron tn + chr2R_10_18985001 chr2R_18985001 RAL-508 917 chr2R 19016898 19016943 chr2R 19017002 19017048 8 105 4.5 0.0 2.2 2.5 150 chr2R 19016898 intergenic not near genes chr2R 19016973 intergenic not near genes chr2R 19017048 intergenic not near genes chr2R_8_19015001 chr2R_19015001 RAL-508 918 chr2R 19071247 19071290 chr2R 19071344 19071387 10 97 8.0 3.5 5.8 1.5 140 chr2R 19071247 intron 5-HT1A + chr2R 19071317 intron 5-HT1A + chr2R 19071387 intron 5-HT1A + chr2R_10_19070001 chr2R_19070001 RAL-508 919 chr2R 19255580 19255589 chr2R 19255696 19255703 4 116 6.0 13.5 9.8 0.4 123 chr2R 19255580 intergenic not near genes chr2R 19255642 intergenic not near genes chr2R 19255703 intergenic not near genes chr2R_4_19255001 chr2R_19255001 RAL-508 920 chr2R 19363166 19363218 chr2R 19363262 19363312 7 95 1.0 4.0 2.5 2.0 146 chr2R 19363166 intergenic CG10051 + chr2R 19363239 intergenic CG10051 + chr2R 19363312 intergenic CG10051 + chr2R_7_19360001 chr2R_19360001 RAL-508 921 chr2R 19533536 19533582 chr2R 19533632 19533658 6 87 4.0 3.0 3.5 1.3 122 chr2R 19533536 intron sm - chr2R 19533597 intron sm - chr2R 19533658 intron sm - chr2R_6_19530001 chr2R_19530001 RAL-508 922 chr2R 19537559 19537612 chr2R 19537676 19537728 14 116 4.5 4.5 4.5 2.5 169 chr2R 19537559 intron sm - chr2R 19537644 intron sm - chr2R 19537728 intron sm - chr2R_14_19535001 chr2R_19535001 RAL-508 923 chr2R 19575550 19575576 chr2R 19575648 19575674 7 98 1.5 1.5 1.5 2.8 124 chr2R 19575550 intron sm - chr2R 19575612 intron sm - chr2R 19575674 intron sm - chr2R_7_19575001 chr2R_19575001 RAL-508 924 chr2R 19657098 19657143 chr2R 19657202 19657247 14 104 7.0 5.0 6.0 2.0 149 chr2R 19657098 3` UTR CR44214 - chr2R 19657172 3` UTR CR44214 - chr2R 19657247 3` UTR CR44214 - chr2R_14_19655001 chr2R_19655001 RAL-508 925 chr2R 19715836 19715854 chr2R 19723325 19723341 blood 6 7488 14.5 6.5 10.5 0.5 7505 chr2R 19715836 intergenic not near genes chr2R 19719588 intergenic not near genes chr2R 19723341 intergenic not near genes chr2R_6_19715001 chr2R_19715001 RAL-508 926 chr2R 19773992 19774034 chr2R 19774125 19774167 13 133 5.0 1.5 3.2 3.1 175 chr2R 19773992 intergenic not near genes chr2R 19774080 intergenic not near genes chr2R 19774167 intergenic not near genes chr2R_13_19770001 chr2R_19770001 RAL-508 927 chr2R 19776576 19776623 chr2R 19779918 19779966 jockey 15 3342 3.5 6.5 5.0 2.5 3390 chr2R 19776576 intergenic not near genes chr2R 19778271 intergenic not near genes chr2R 19779966 intergenic not near genes chr2R_15_19775001 chr2R_19775001 RAL-508 928 chr2R 19907772 19907810 chr2R 19908221 19908259 5 442 2.5 7.0 4.8 0.9 487 chr2R 19907772 intergenic not near genes chr2R 19908016 intergenic not near genes chr2R 19908259 intergenic not near genes chr2R_5_19905001 chr2R_19905001 RAL-508 929 chr2R 19957433 19957457 chr2R 19962631 19962638 copia 5 5200 4.5 1.0 2.8 1.3 5205 chr2R 19957433 intergenic CG44623 + chr2R 19960036 intergenic not near genes chr2R 19962638 intergenic not near genes chr2R_5_19960001 chr2R_19960001 RAL-508 930 chr2R 20004752 20004788 chr2R 20004852 20004890 16 100 4.5 3.5 4.0 3.2 138 chr2R 20004752 exon CG16898 - chr2R 20004821 exon CG16898 - chr2R 20004890 exon CG16898 - chr2R_16_20000001 chr2R_20000001 RAL-508 931 chr2R 20044533 20044583 chr2R 20045006 20045028 15 468 1.5 2.5 2.0 5.0 495 chr2R 20044533 intergenic not near genes chr2R 20044780 intergenic not near genes chr2R 20045028 intergenic not near genes chr2R_15_20040001 chr2R_20040001 RAL-508 932 chr2R 20069231 20069245 chr2R 20071872 20071901 opus 4 2653 1.5 3.0 2.2 1.2 2670 chr2R 20069231 intergenic not near genes chr2R 20070566 intergenic not near genes chr2R 20071901 intergenic not near genes chr2R_4_20070001 chr2R_20070001 RAL-508 933 chr2R 20080610 20080625 chr2R 20080689 20080719 7 92 0.0 12.0 6.0 1.0 109 chr2R 20080610 intergenic not near genes chr2R 20080664 intergenic not near genes chr2R 20080719 intergenic not near genes chr2R_7_20080001 chr2R_20080001 RAL-508 934 chr2R 20125730 20125749 chr2R 20125826 20125845 5 96 1.5 6.0 3.8 1.0 115 chr2R 20125730 intergenic not near genes chr2R 20125788 intergenic not near genes chr2R 20125845 intergenic not near genes chr2R_5_20125001 chr2R_20125001 RAL-508 935 chr2R 20142433 20142484 chr2R 20142532 20142579 8 97 0.5 4.0 2.2 2.5 146 chr2R 20142433 intergenic not near genes chr2R 20142506 intergenic not near genes chr2R 20142579 intergenic not near genes chr2R_8_20140001 chr2R_20140001 RAL-508 936 chr2R 20161885 20161900 chr2R 20161983 20161998 9 97 0.5 4.0 2.2 2.8 113 chr2R 20161885 intergenic not near genes chr2R 20161942 intergenic not near genes chr2R 20161998 intergenic not near genes chr2R_9_20160001 chr2R_20160001 RAL-508 937 chr2R 20227664 20227671 chr2R 20227783 20227786 4 118 8.5 7.0 7.8 0.5 122 chr2R 20227664 intergenic not near genes chr2R 20227725 intergenic not near genes chr2R 20227786 intergenic not near genes chr2R_4_20225001 chr2R_20225001 RAL-508 938 chr2R 20523092 20523126 chr2R 20523175 20523209 13 88 4.0 6.0 5.0 2.2 117 chr2R 20523092 intergenic not near genes chr2R 20523150 intergenic not near genes chr2R 20523209 intergenic not near genes chr2R_13_20520001 chr2R_20520001 RAL-508 939 chr2R 20572553 20572585 chr2R 20572663 20572695 6 110 5.0 2.5 3.8 1.2 142 chr2R 20572553 intron qsm - chr2R 20572624 intron qsm - chr2R 20572695 intron qsm - chr2R_6_20570001 chr2R_20570001 RAL-508 940 chr2R 20601729 20601752 chr2R 20601809 20601849 7 95 1.0 3.0 2.0 2.3 120 chr2R 20601729 intron bl + chr2R 20601789 intron bl + chr2R 20601849 intron bl + chr2R_7_20600001 chr2R_20600001 RAL-508 941 chr2R 20707378 20707397 chr2R 20707558 20707573 4 177 2.5 6.5 4.5 0.7 195 chr2R 20707378 intron dpr + chr2R 20707476 intron dpr + chr2R 20707573 intron dpr + chr2R_4_20705001 chr2R_20705001 RAL-508 942 chr2R 20707398 20707401 chr2R 20707541 20707559 4 154 2.5 4.5 3.5 0.9 161 chr2R 20707398 intron dpr + chr2R 20707478 intron dpr + chr2R 20707559 intron dpr + chr2R_4_20705001 chr2R_20705001 RAL-508 943 chr2R 20739423 20739473 chr2R 20744210 20744237 F-element 14 4782 5.0 2.5 3.8 2.9 4814 chr2R 20739423 intron dpr + chr2R 20741830 intron dpr + chr2R 20744237 intron dpr + chr2R_14_20740001 chr2R_20740001 RAL-508 944 chr2R 20783292 20783328 chr2R 20788084 20788120 F-element 14 4791 3.0 4.5 3.8 2.9 4828 chr2R 20783292 intergenic not near genes chr2R 20785706 intergenic not near genes chr2R 20788120 intergenic CG43666 - chr2R_14_20785001 chr2R_20785001 RAL-508 945 chr2R 20962888 20962935 chr2R 20963006 20963053 17 117 3.0 4.0 3.5 3.8 165 chr2R 20962888 intergenic not near genes chr2R 20962970 intergenic not near genes chr2R 20963053 intergenic not near genes chr2R_17_20960001 chr2R_20960001 RAL-508 946 chr2R 20980074 20980123 chr2R 20980193 20980235 9 116 4.0 1.0 2.5 2.6 161 chr2R 20980074 intron CG9313 + chr2R 20980154 intron CG9313 + chr2R 20980235 intron CG9313 + chr2R_9_20980001 chr2R_20980001 RAL-508 947 chr2R 21057477 21057508 chr2R 21057576 21057608 5 101 2.0 0.0 1.0 2.5 131 chr2R 21057477 intergenic shg -,cpa + chr2R 21057542 intergenic cpa +,shg - chr2R 21057608 intergenic cpa +,shg - chr2R_5_21055001 chr2R_21055001 RAL-508 948 chr2R 21075667 21075710 chr2R 21075771 21075812 8 102 2.5 3.5 3.0 2.0 145 chr2R 21075667 intron Treh + chr2R 21075740 intron Treh + chr2R 21075812 intron Treh + chr2R_8_21075001 chr2R_21075001 RAL-508 949 chr2R 21113459 21113483 chr2R 21113568 21113592 9 108 10.0 3.0 6.5 1.2 133 chr2R 21113459 intron ktub + chr2R 21113526 intron ktub + chr2R 21113592 intron ktub + chr2R_9_21110001 chr2R_21110001 RAL-508 950 chr2R 21136882 21136910 chr2R 21136986 21137014 8 104 2.5 0.5 1.5 3.2 132 chr2R 21136882 intron Magi - chr2R 21136948 intron Magi - chr2R 21137014 intron Magi - chr2R_8_21135001 chr2R_21135001 RAL-508 951 chr2R 21136911 21136940 chr2R 21136984 21137038 4 93 0.0 0.5 0.2 3.3 127 chr2R 21136911 intron Magi - chr2R 21136974 intron Magi - chr2R 21137038 intron Magi - chr2R_4_21135001 chr2R_21135001 RAL-508 952 chr2R 21151141 21151146 chr2R 21153794 21153799 opus 6 2653 0.0 2.0 1.0 3.0 2658 chr2R 21151141 intron CG30389 - chr2R 21152470 intron CG30389 - chr2R 21153799 intron CG30389 - chr2R_6_21150001 chr2R_21150001 RAL-508 953 chr2R 21285419 21285435 chr2R 21285515 21285519 6 95 6.5 8.0 7.2 0.7 100 chr2R 21285419 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285469 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285519 3` UTR,3` UTR MFS16 +,CG10505 - chr2R_6_21285001 chr2R_21285001 RAL-508 954 chr2R 21301240 21301257 chr2R 21301443 21301470 5 201 5.5 4.5 5.0 0.8 230 chr2R 21301240 intron CG42672 + chr2R 21301355 intron CG42672 + chr2R 21301470 intron CG42672 + chr2R_5_21300001 chr2R_21300001 RAL-508 955 chr2R 21429924 21429970 chr2R 21430021 21430068 5 98 3.0 4.0 3.5 1.1 144 chr2R 21429924 intron Sdc - chr2R 21429996 intron Sdc - chr2R 21430068 intron Sdc - chr2R_5_21425001 chr2R_21425001 RAL-508 956 chr2R 21447098 21447121 chr2R 21447223 21447245 6 122 2.0 0.0 1.0 3.0 147 chr2R 21447098 intron Sdc - chr2R 21447172 intron Sdc - chr2R 21447245 intron Sdc - chr2R_6_21445001 chr2R_21445001 RAL-508 957 chr2R 21455048 21455067 chr2R 21455124 21455140 7 79 2.0 1.0 1.5 2.8 92 chr2R 21455048 intron Sdc - chr2R 21455094 intron Sdc - chr2R 21455140 intron Sdc - chr2R_7_21455001 chr2R_21455001 RAL-508 958 chr2R 21467507 21467532 chr2R 21467614 21467634 6 104 4.5 2.0 3.2 1.4 127 chr2R 21467507 intron Sdc - chr2R 21467570 intron Sdc - chr2R 21467634 intron Sdc - chr2R_6_21465001 chr2R_21465001 RAL-508 959 chr2R 21469919 21469969 chr2R 21470026 21470076 4 106 2.5 2.5 2.5 1.1 157 chr2R 21469919 intron Sdc - chr2R 21469998 intron Sdc - chr2R 21470076 intron Sdc - chr2R_4_21465001 chr2R_21465001 RAL-508 960 chr2R 21481199 21481236 chr2R 21481364 21481407 9 170 3.0 4.0 3.5 2.0 208 chr2R 21481199 intergenic Sdc - chr2R 21481303 intergenic Sdc - chr2R 21481407 intergenic Sdc - chr2R_9_21480001 chr2R_21480001 RAL-508 961 chr2R 21642010 21642029 chr2R 21642079 21642099 10 83 2.0 3.0 2.5 2.9 89 chr2R 21642010 intergenic not near genes chr2R 21642054 intergenic not near genes chr2R 21642099 intergenic not near genes chr2R_10_21640001 chr2R_21640001 RAL-508 962 chr2R 21659662 21659679 chr2R 21659900 21659911 4 246 12.5 15.5 14.0 0.3 249 chr2R 21659662 exon Rae1 - chr2R 21659786 exon Rae1 - chr2R 21659911 exon Rae1 - chr2R_4_21655001 chr2R_21655001 RAL-508 963 chr2R 21738258 21738297 chr2R 21747437 21747472 roo 9 9168 5.5 2.5 4.0 1.8 9214 chr2R 21738258 intergenic not near genes chr2R 21742865 intergenic not near genes chr2R 21747472 intergenic not near genes chr2R_9_21740001 chr2R_21740001 RAL-508 964 chr2R 21753062 21753115 chr2R 21753567 21753618 roo 27 503 4.5 5.0 4.8 4.7 556 chr2R 21753062 intergenic not near genes chr2R 21753340 intergenic not near genes chr2R 21753618 intergenic not near genes chr2R_27_21750001 chr2R_21750001 RAL-508 965 chr2R 21759553 21759589 chr2R 21759648 21759693 13 97 5.0 3.0 4.0 2.6 140 chr2R 21759553 intergenic not near genes chr2R 21759623 intergenic not near genes chr2R 21759693 intergenic not near genes chr2R_13_21755001 chr2R_21755001 RAL-508 966 chr2R 21803453 21803497 chr2R 21803549 21803595 10 96 0.0 6.0 3.0 2.5 142 chr2R 21803453 5` UTR CR9284 + chr2R 21803524 5` UTR CR9284 + chr2R 21803595 intron CR9284 + chr2R_10_21800001 chr2R_21800001 RAL-508 967 chr2R 21805824 21805861 chr2R 21805904 21805958 16 93 4.0 2.5 3.2 3.8 134 chr2R 21805824 intergenic not near genes chr2R 21805891 intergenic not near genes chr2R 21805958 intergenic not near genes chr2R_16_21805001 chr2R_21805001 RAL-508 968 chr2R 21809527 21809555 chr2R 21817786 21817790 roo 6 8255 1.0 7.0 4.0 1.2 8263 chr2R 21809527 intergenic not near genes chr2R 21813658 intergenic not near genes chr2R 21817790 intergenic not near genes chr2R_6_21810001 chr2R_21810001 RAL-508 969 chr2R 21906261 21906299 chr2R 21906382 21906418 5 120 4.0 8.0 6.0 0.7 157 chr2R 21906261 intron Fili + chr2R 21906340 intron Fili + chr2R 21906418 intron Fili + chr2R_5_21905001 chr2R_21905001 RAL-508 970 chr2R 21908648 21908695 chr2R 21908753 21908800 10 100 3.5 5.0 4.2 1.9 152 chr2R 21908648 intron Fili + chr2R 21908724 intron Fili + chr2R 21908800 intron Fili + chr2R_10_21905001 chr2R_21905001 RAL-508 971 chr2R 21917599 21917640 chr2R 21917835 21917874 14 231 3.5 2.5 3.0 3.5 275 chr2R 21917599 intron Fili + chr2R 21917736 intron Fili + chr2R 21917874 intron Fili + chr2R_14_21915001 chr2R_21915001 RAL-508 972 chr2R 21958671 21958710 chr2R 21958763 21958787 12 94 4.5 4.5 4.5 2.2 116 chr2R 21958671 intergenic not near genes chr2R 21958729 intergenic not near genes chr2R 21958787 intergenic not near genes chr2R_12_21955001 chr2R_21955001 RAL-508 973 chr2R 21985521 21985561 chr2R 21985622 21985662 14 101 3.5 6.0 4.8 2.4 141 chr2R 21985521 intergenic CG30401 - chr2R 21985592 intergenic CG30401 - chr2R 21985662 3` UTR CG30401 - chr2R_14_21985001 chr2R_21985001 RAL-508 974 chr2R 21992397 21992429 chr2R 21992494 21992525 6 97 1.0 5.5 3.2 1.4 128 chr2R 21992397 intron CG34370 - chr2R 21992461 intron CG34370 - chr2R 21992525 intron CG34370 - chr2R_6_21990001 chr2R_21990001 RAL-508 975 chr2R 22004276 22004313 chr2R 22004390 22004427 8 114 5.0 1.0 3.0 2.0 151 chr2R 22004276 intron CG34370 - chr2R 22004352 intron CG34370 - chr2R 22004427 intron CG34370 - chr2R_8_22000001 chr2R_22000001 RAL-508 976 chr2R 22029463 22029506 chr2R 22029621 22029664 9 158 0.5 3.0 1.8 3.2 201 chr2R 22029463 intron CG34370 - chr2R 22029564 intron CG34370 - chr2R 22029664 intron CG34370 - chr2R_9_22025001 chr2R_22025001 RAL-508 977 chr2R 22035521 22035574 chr2R 22035628 22035662 24 106 2.5 6.0 4.2 4.6 141 chr2R 22035521 intron,exon CG34370 -,CG9308 + chr2R 22035592 intron,3` UTR CG34370 -,CG9308 + chr2R 22035662 intron,3` UTR CG34370 -,CG9308 + chr2R_24_22035001 chr2R_22035001 RAL-508 978 chr2R 22124287 22124337 chr2R 22124396 22124444 6 109 3.0 3.5 3.2 1.4 157 chr2R 22124287 3` UTR mei-S332 + chr2R 22124366 3` UTR mei-S332 + chr2R 22124444 intergenic mei-S332 +,GM130 - chr2R_6_22120001 chr2R_22120001 RAL-508 979 chr2R 22127342 22127374 chr2R 22127439 22127455 7 94 2.5 0.0 1.2 3.2 113 chr2R 22127342 exon GM130 - chr2R 22127398 5` UTR GM130 - chr2R 22127455 5` UTR GM130 - chr2R_7_22125001 chr2R_22125001 RAL-508 980 chr2R 22185676 22185683 chr2R 22185795 22185799 7 118 2.0 0.5 1.2 3.2 123 chr2R 22185676 3` UTR MED16 + chr2R 22185738 3` UTR MED16 + chr2R 22185799 3` UTR MED16 + chr2R_7_22185001 chr2R_22185001 RAL-508 981 chr2R 22189445 22189472 chr2R 22189587 22189619 8 142 5.5 2.0 3.8 1.7 174 chr2R 22189445 3` UTR Vps35 + chr2R 22189532 3` UTR Vps35 + chr2R 22189619 3` UTR Vps35 + chr2R_8_22185001 chr2R_22185001 RAL-508 982 chr2R 22252384 22252387 chr2R 22252487 22252489 4 102 7.0 5.0 6.0 0.6 105 chr2R 22252384 intron dve + chr2R 22252436 intron dve + chr2R 22252489 intron dve + chr2R_4_22250001 chr2R_22250001 RAL-508 983 chr2R 22252389 22252433 chr2R 22252484 22252532 16 100 3.0 4.5 3.8 3.3 143 chr2R 22252389 intron dve + chr2R 22252460 intron dve + chr2R 22252532 intron dve + chr2R_16_22250001 chr2R_22250001 RAL-508 984 chr2R 22272059 22272073 chr2R 22272181 22272195 7 121 10.5 7.5 9.0 0.7 136 chr2R 22272059 intron dve + chr2R 22272127 intron dve + chr2R 22272195 intron dve + chr2R_7_22270001 chr2R_22270001 RAL-508 985 chr2R 22290069 22290078 chr2R 22290163 22290182 4 102 6.0 5.0 5.5 0.6 113 chr2R 22290069 intergenic not near genes chr2R 22290126 intergenic not near genes chr2R 22290182 intergenic not near genes chr2R_4_22290001 chr2R_22290001 RAL-508 986 chr2R 22349674 22349721 chr2R 22351478 22351525 jockey 7 1804 2.5 6.0 4.2 1.3 1851 chr2R 22349674 intron Liprin-gamma - chr2R 22350600 intron Liprin-gamma - chr2R 22351525 intron Liprin-gamma - chr2R_7_22350001 chr2R_22350001 RAL-508 987 chr2R 22362643 22362678 chr2R 22362740 22362776 8 94 5.0 4.5 4.8 1.4 133 chr2R 22362643 intron Liprin-gamma - chr2R 22362710 intron Liprin-gamma - chr2R 22362776 intron Liprin-gamma - chr2R_8_22360001 chr2R_22360001 RAL-508 988 chr2R 22380345 22380384 chr2R 22380456 22380495 7 111 3.0 0.0 1.5 2.8 150 chr2R 22380345 intron wrapper + chr2R 22380420 intron wrapper + chr2R 22380495 intron wrapper + chr2R_7_22380001 chr2R_22380001 RAL-508 989 chr2R 22430418 22430468 chr2R 22430513 22430563 14 88 0.0 2.5 1.2 6.4 145 chr2R 22430418 intergenic not near genes chr2R 22430490 intergenic not near genes chr2R 22430563 intergenic not near genes chr2R_14_22430001 chr2R_22430001 RAL-508 990 chr2R 22460361 22460406 chr2R 22460460 22460505 14 98 4.5 2.5 3.5 3.1 144 chr2R 22460361 intron CG10384 + chr2R 22460433 intron CG10384 + chr2R 22460505 intron CG10384 + chr2R_14_22460001 chr2R_22460001 RAL-508 991 chr2R 22525738 22525781 chr2R 22529313 22529341 jockey 14 3572 6.0 4.5 5.2 2.3 3603 chr2R 22525738 intron px - chr2R 22527540 intron px - chr2R 22529341 intron px - chr2R_14_22525001 chr2R_22525001 RAL-508 992 chr2R 22540919 22540932 chr2R 22541018 22541031 5 99 4.0 1.5 2.8 1.3 112 chr2R 22540919 exon px - chr2R 22540975 exon px - chr2R 22541031 intron px - chr2R_5_22540001 chr2R_22540001 RAL-508 993 chr2R 22540934 22540964 chr2R 22541015 22541063 12 94 1.5 1.5 1.5 4.8 129 chr2R 22540934 exon px - chr2R 22540998 intron px - chr2R 22541063 intron px - chr2R_12_22540001 chr2R_22540001 RAL-508 994 chr2R 22654363 22654399 chr2R 22654449 22654500 9 93 0.5 3.5 2.0 3.0 137 chr2R 22654363 exon Cyp6d2 - chr2R 22654432 5` UTR Cyp6d2 - chr2R 22654500 5` UTR Cyp6d2 - chr2R_9_22650001 chr2R_22650001 RAL-508 995 chr2R 22756606 22756649 chr2R 22756710 22756747 9 100 4.0 0.0 2.0 3.0 141 chr2R 22756606 intron,intron CG42260 -,CR30267 + chr2R 22756676 intron,intron CG42260 -,CR30267 + chr2R 22756747 intron,intron CG42260 -,CR30267 + chr2R_9_22755001 chr2R_22755001 RAL-508 996 chr2R 22760973 22761009 chr2R 22761071 22761107 10 98 4.5 4.0 4.2 1.9 134 chr2R 22760973 intron CG42260 - chr2R 22761040 intron CG42260 - chr2R 22761107 intron CG42260 - chr2R_10_22760001 chr2R_22760001 RAL-508 997 chr2R 22774954 22775002 chr2R 22775393 22775441 jockey 12 433 3.5 9.5 6.5 1.6 487 chr2R 22774954 intron CG42260 - chr2R 22775198 intron CG42260 - chr2R 22775441 intron CG42260 - chr2R_12_22775001 chr2R_22775001 RAL-508 998 chr2R 22785713 22785759 chr2R 22785807 22785857 8 97 2.5 2.0 2.2 2.5 144 chr2R 22785713 intron CG42260 - chr2R 22785785 intron CG42260 - chr2R 22785857 intron CG42260 - chr2R_8_22785001 chr2R_22785001 RAL-508 999 chr2R 22835513 22835536 chr2R 22835646 22835649 5 129 6.5 5.5 6.0 0.7 136 chr2R 22835513 exon CG12490 + chr2R 22835581 exon CG12490 + chr2R 22835649 exon CG12490 + chr2R_5_22835001 chr2R_22835001 RAL-508 1000 chr2R 22938803 22938837 chr2R 22938916 22938949 7 110 3.5 3.5 3.5 1.6 146 chr2R 22938803 3` UTR CG9849 + chr2R 22938876 3` UTR CG9849 + chr2R 22938949 3` UTR CG9849 + chr2R_7_22935001 chr2R_22935001 RAL-508 1001 chr2R 22951821 22951865 chr2R 22951925 22951971 14 106 6.5 5.0 5.8 2.1 150 chr2R 22951821 3` UTR CR32835 - chr2R 22951896 3` UTR CR32835 - chr2R 22951971 intron CR32835 - chr2R_14_22950001 chr2R_22950001 RAL-508 1002 chr2R 22953371 22953374 chr2R 22953484 22953487 4 113 6.0 0.0 3.0 1.0 116 chr2R 22953371 intron CR32835 - chr2R 22953429 3` UTR CR32835 - chr2R 22953487 3` UTR CR32835 - chr2R_4_22950001 chr2R_22950001 RAL-508 1003 chr2R 22988292 22988322 chr2R 22988392 22988421 8 99 3.0 4.0 3.5 1.8 129 chr2R 22988292 intron twi + chr2R 22988356 intron twi + chr2R 22988421 intron twi + chr2R_8_22985001 chr2R_22985001 RAL-508 1004 chr2R 23122888 23122941 chr2R 23122988 23123040 17 99 1.0 3.0 2.0 5.7 152 chr2R 23122888 intergenic not near genes chr2R 23122964 intergenic not near genes chr2R 23123040 intergenic not near genes chr2R_17_23120001 chr2R_23120001 RAL-508 1005 chr2R 23158326 23158354 chr2R 23158423 23158447 9 96 9.5 8.5 9.0 0.9 121 chr2R 23158326 intron CG9899 + chr2R 23158386 intron CG9899 + chr2R 23158447 intron CG9899 + chr2R_9_23155001 chr2R_23155001 RAL-508 1006 chr2R 23175040 23175058 chr2R 23175136 23175154 4 96 6.5 5.0 5.8 0.6 114 chr2R 23175040 intron CG34371 - chr2R 23175097 intron CG34371 - chr2R 23175154 intron CG34371 - chr2R_4_23175001 chr2R_23175001 RAL-508 1007 chr2R 23184289 23184297 chr2R 23184361 23184402 7 95 0.0 2.5 1.2 3.2 113 chr2R 23184289 intron,intron CG34371 -,CG13539 + chr2R 23184346 intron,intron CG34371 -,CG13539 + chr2R 23184402 intron,intron CG34371 -,CG13539 + chr2R_7_23180001 chr2R_23180001 RAL-508 1008 chr2R 23190002 23190059 chr2R 23190102 23190131 4 93 4.0 0.0 2.0 1.3 129 chr2R 23190002 intron CG34371 - chr2R 23190066 intron CG34371 - chr2R 23190131 intron CG34371 - chr2R_4_23190001 chr2R_23190001 RAL-508 1009 chr2R 23218988 23219003 chr2R 23219247 23219261 5 257 7.0 0.0 3.5 1.1 273 chr2R 23218988 intergenic not near genes chr2R 23219124 intergenic not near genes chr2R 23219261 intergenic not near genes chr2R_5_23215001 chr2R_23215001 RAL-508 1010 chr2R 23236796 23236852 chr2R 23236914 23236962 5 110 0.0 0.0 0.0 5.0 166 chr2R 23236796 intergenic not near genes chr2R 23236879 intergenic not near genes chr2R 23236962 intergenic not near genes chr2R_5_23235001 chr2R_23235001 RAL-508 1011 chr2R 23291309 23291340 chr2R 23291407 23291437 11 97 6.0 0.5 3.2 2.6 128 chr2R 23291309 3` UTR CR44783 - chr2R 23291373 3` UTR CR44783 - chr2R 23291437 intergenic CR44783 - chr2R_11_23290001 chr2R_23290001 RAL-508 1012 chr2R 23343375 23343424 chr2R 23343725 23343774 13 349 4.5 4.0 4.2 2.5 399 chr2R 23343375 intergenic CG3502 - chr2R 23343574 exon CG3502 - chr2R 23343774 exon CG3502 - chr2R_13_23340001 chr2R_23340001 RAL-508 1013 chr2R 23492987 23493039 chr2R 23493089 23493140 10 95 3.5 1.5 2.5 2.9 153 chr2R 23492987 intergenic not near genes chr2R 23493064 intergenic not near genes chr2R 23493140 intergenic not near genes chr2R_10_23490001 chr2R_23490001 RAL-508 1014 chr2R 23607018 23607187 chr2R 23607119 23607300 27 106 2.0 2.0 2.0 9.0 282 chr2R 23607018 intron CG17664 - chr2R 23607159 intron CG17664 - chr2R 23607300 intron CG17664 - chr2R_27_23605001 chr2R_23605001 RAL-508 1015 chr2R 23637593 23637625 chr2R 23637949 23637951 4 350 3.5 2.5 3.0 1.0 358 chr2R 23637593 intron retn + chr2R 23637772 intron retn + chr2R 23637951 intron retn + chr2R_4_23635001 chr2R_23635001 RAL-508 1016 chr2R 23653977 23654003 chr2R 23654055 23654100 11 88 6.0 8.0 7.0 1.4 123 chr2R 23653977 3` UTR retn + chr2R 23654038 3` UTR retn + chr2R 23654100 3` UTR retn + chr2R_11_23650001 chr2R_23650001 RAL-508 1017 chr2R 23726216 23726241 chr2R 23726313 23726334 8 104 6.5 2.5 4.5 1.5 118 chr2R 23726216 intron Sesn + chr2R 23726275 intron Sesn + chr2R 23726334 intron Sesn + chr2R_8_23725001 chr2R_23725001 RAL-508 1018 chr2R 23784455 23784488 chr2R 23784553 23784585 12 93 8.0 6.0 7.0 1.5 130 chr2R 23784455 intron CG9850 - chr2R 23784520 intron CG9850 - chr2R 23784585 intron CG9850 - chr2R_12_23780001 chr2R_23780001 RAL-508 1019 chr2R 23784489 23784505 chr2R 23784548 23784603 8 86 5.0 7.0 6.0 1.1 114 chr2R 23784489 intron CG9850 - chr2R 23784546 intron CG9850 - chr2R 23784603 intron CG9850 - chr2R_8_23780001 chr2R_23780001 RAL-508 1020 chr2R 23914287 23914324 chr2R 23921931 23921960 412 12 7640 4.0 6.5 5.2 1.9 7673 chr2R 23914287 exon kcc + chr2R 23918124 intron kcc + chr2R 23921960 intron kcc + chr2R_12_23915001 chr2R_23915001 RAL-508 1021 chr2R 23986498 23986545 chr2R 23986597 23986645 13 100 2.0 3.5 2.8 3.4 147 chr2R 23986498 intron Phm - chr2R 23986572 intron Phm - chr2R 23986645 intron,5` UTR Phm -,CG30178 + chr2R_13_23985001 chr2R_23985001 RAL-508 1022 chr2R 24031367 24031378 chr2R 24031471 24031482 4 104 12.5 5.0 8.8 0.4 115 chr2R 24031367 5` UTR CG30172 - chr2R 24031424 5` UTR CG30172 - chr2R 24031482 intergenic CG30172 -,Chi - chr2R_4_24030001 chr2R_24030001 RAL-508 1023 chr2R 24031379 24031412 chr2R 24031466 24031516 11 100 4.0 5.0 4.5 2.0 137 chr2R 24031379 5` UTR CG30172 - chr2R 24031448 intergenic CG30172 -,Chi - chr2R 24031516 intergenic Chi -,CG30172 - chr2R_11_24030001 chr2R_24030001 RAL-508 1024 chr2R 24147067 24147095 chr2R 24154644 24154682 412 7 7582 1.5 5.0 3.2 1.7 7615 chr2R 24147067 intron Dat + chr2R 24150874 intron Dat + chr2R 24154682 intron Dat + chr2R_7_24150001 chr2R_24150001 RAL-508 1025 chr2R 24177222 24177261 chr2R 24184727 24184766 412 12 7505 4.5 6.5 5.5 1.8 7544 chr2R 24177222 3` UTR Nop60B + chr2R 24180994 intron Nop60B + chr2R 24184766 3` UTR Nop60B + chr2R_12_24180001 chr2R_24180001 RAL-508 1026 chr2R 24278307 24278333 chr2R 24278411 24278437 7 103 0.5 6.0 3.2 1.7 130 chr2R 24278307 intron nvy + chr2R 24278372 intron nvy + chr2R 24278437 intron nvy + chr2R_7_24275001 chr2R_24275001 RAL-508 1027 chr2R 24278335 24278354 chr2R 24278409 24278452 4 86 0.0 5.5 2.8 1.1 117 chr2R 24278335 intron nvy + chr2R 24278394 intron nvy + chr2R 24278452 intron nvy + chr2R_4_24275001 chr2R_24275001 RAL-508 1028 chr2R 24292491 24292536 chr2R 24292593 24292641 5 100 3.0 1.5 2.2 1.6 150 chr2R 24292491 intergenic not near genes chr2R 24292566 intergenic not near genes chr2R 24292641 intergenic not near genes chr2R_5_24290001 chr2R_24290001 RAL-508 1029 chr2R 24320174 24320191 chr2R 24320271 24320282 4 94 3.0 4.0 3.5 0.9 108 chr2R 24320174 intergenic not near genes chr2R 24320228 intergenic not near genes chr2R 24320282 intergenic not near genes chr2R_4_24320001 chr2R_24320001 RAL-508 1030 chr2R 24353423 24353451 chr2R 24361800 24361823 roo 10 8377 3.5 3.5 3.5 2.2 8400 chr2R 24353423 intron,intron bs +,CR44811 - chr2R 24357623 intron,intron bs +,CR44811 - chr2R 24361823 intron,intron bs +,CR44811 - chr2R_10_24355001 chr2R_24355001 RAL-508 1031 chr2R 24430792 24430838 chr2R 24430893 24430939 8 101 4.5 4.5 4.5 1.5 147 chr2R 24430792 intergenic CG15873 - chr2R 24430866 intergenic CG15873 -,Pgam5-2 - chr2R 24430939 intergenic CG15873 -,Pgam5-2 - chr2R_8_24430001 chr2R_24430001 RAL-508 1032 chr2R 24493071 24493089 chr2R 24493176 24493197 8 106 5.0 4.5 4.8 1.4 126 chr2R 24493071 intergenic CG13590 -,CG13589 - chr2R 24493134 intergenic CG13590 -,CG13589 - chr2R 24493197 intergenic CG13590 -,CG13589 - chr2R_8_24490001 chr2R_24490001 RAL-508 1033 chr2R 24630533 24630576 chr2R 24630748 24630793 11 216 6.0 6.5 6.2 1.5 260 chr2R 24630533 intron CG13594 - chr2R 24630663 intron CG13594 - chr2R 24630793 intron CG13594 - chr2R_11_24630001 chr2R_24630001 RAL-508 1034 chr2R 24644700 24644711 chr2R 24644938 24644945 4 236 7.0 5.0 6.0 0.6 245 chr2R 24644700 intergenic not near genes chr2R 24644822 intergenic not near genes chr2R 24644945 intergenic not near genes chr2R_4_24640001 chr2R_24640001 RAL-508 1035 chr2R 24644716 24644744 chr2R 24644934 24644974 8 234 3.0 4.5 3.8 1.7 258 chr2R 24644716 intergenic not near genes chr2R 24644845 intergenic not near genes chr2R 24644974 intergenic not near genes chr2R_8_24640001 chr2R_24640001 RAL-508 1036 chr2R 24647571 24647617 chr2R 24655148 24655192 412 11 7575 4.0 2.5 3.2 2.6 7621 chr2R 24647571 intergenic not near genes chr2R 24651382 intergenic not near genes chr2R 24655192 intergenic not near genes chr2R_11_24650001 chr2R_24650001 RAL-508 1037 chr2R 24665999 24666042 chr2R 24666112 24666155 12 112 7.0 3.5 5.2 1.9 156 chr2R 24665999 5` UTR CG34214 - chr2R 24666077 intergenic CG34214 -,CG4806 - chr2R 24666155 intergenic CG4806 -,CG34214 - chr2R_12_24665001 chr2R_24665001 RAL-508 1038 chr2R 24722350 24722396 chr2R 24722452 24722498 20 101 5.0 3.0 4.0 4.0 148 chr2R 24722350 intron Mid1 - chr2R 24722424 intron Mid1 - chr2R 24722498 intron Mid1 - chr2R_20_24720001 chr2R_24720001 RAL-508 1039 chr2R 24727875 24727904 chr2R 24735403 24735408 mdg1 7 7519 3.0 6.5 4.8 1.2 7533 chr2R 24727875 intron Mid1 - chr2R 24731642 intron Mid1 - chr2R 24735408 intron Mid1 - chr2R_7_24730001 chr2R_24730001 RAL-508 1040 chr2R 24737127 24737170 chr2R 24737267 24737303 8 133 5.0 5.0 5.0 1.3 176 chr2R 24737127 intergenic Mid1 - chr2R 24737215 intergenic not near genes chr2R 24737303 intergenic not near genes chr2R_8_24735001 chr2R_24735001 RAL-508 1041 chr2R 24859820 24859866 chr2R 24859925 24859972 17 100 1.5 1.0 1.2 7.7 152 chr2R 24859820 5` UTR CR44829 + chr2R 24859896 5` UTR CR44829 + chr2R 24859972 5` UTR CR44829 + chr2R_17_24855001 chr2R_24855001 RAL-508 1042 chr2R 24884033 24884076 chr2R 24884135 24884178 13 102 4.0 3.0 3.5 2.9 145 chr2R 24884033 intron NKAIN + chr2R 24884106 intron NKAIN + chr2R 24884178 intron NKAIN + chr2R_13_24880001 chr2R_24880001 RAL-508 1043 chr2R 25004873 25004906 chr2R 25004971 25004986 10 96 5.5 4.0 4.8 1.7 113 chr2R 25004873 intron zip - chr2R 25004930 intron zip - chr2R 25004986 intron zip - chr2R_10_25000001 chr2R_25000001 RAL-508 1044 chr2R 25004908 25004921 chr2R 25004970 25005003 10 83 5.0 3.5 4.2 1.9 95 chr2R 25004908 intron zip - chr2R 25004956 intron zip - chr2R 25005003 intron zip - chr2R_10_25000001 chr2R_25000001 RAL-508 1045 chr2R 25014533 25014544 chr2R 25014627 25014632 4 94 3.5 5.5 4.5 0.7 99 chr2R 25014533 intron uzip + chr2R 25014582 intron uzip + chr2R 25014632 intron uzip + chr2R_4_25010001 chr2R_25010001 RAL-508 1046 chr2R 25014551 25014574 chr2R 25014625 25014669 8 89 2.0 5.0 3.5 1.8 118 chr2R 25014551 intron uzip + chr2R 25014610 intron uzip + chr2R 25014669 intron uzip + chr2R_8_25010001 chr2R_25010001 RAL-508 1047 chr2R 25018321 25018376 chr2R 25018442 25018494 14 116 1.5 2.5 2.0 4.7 173 chr2R 25018321 intron uzip + chr2R 25018408 intron uzip + chr2R 25018494 intron uzip + chr2R_14_25015001 chr2R_25015001 RAL-508 1048 chr2R 25022624 25022669 chr2R 25022727 25022734 9 100 2.5 4.0 3.2 2.1 110 chr2R 25022624 intron uzip + chr2R 25022679 intron uzip + chr2R 25022734 intron uzip + chr2R_9_25020001 chr2R_25020001 RAL-508 1049 chr2R 25061986 25062010 chr2R 25062072 25062109 7 92 1.5 3.0 2.2 2.2 123 chr2R 25061986 5` UTR gsb + chr2R 25062048 5` UTR gsb + chr2R 25062109 5` UTR gsb + chr2R_7_25060001 chr2R_25060001 RAL-508 1050 chr2R 25080286 25080339 chr2R 25080676 25080733 18 388 3.0 1.5 2.2 5.6 447 chr2R 25080286 intron gol - chr2R 25080510 intron gol - chr2R 25080733 intron gol - chr2R_18_25080001 chr2R_25080001 RAL-508 1051 chr2R 25081592 25081624 chr2R 25082701 25082717 8 1105 6.5 4.5 5.5 1.2 1125 chr2R 25081592 intron gol - chr2R 25082154 intron gol - chr2R 25082717 intron gol - chr2R_8_25080001 chr2R_25080001 RAL-508 1052 chr2R 25101257 25101309 chr2R 25101377 25101410 8 118 4.5 5.5 5.0 1.3 153 chr2R 25101257 intron lov - chr2R 25101334 intron lov - chr2R 25101410 intron lov - chr2R_8_25100001 chr2R_25100001 RAL-508 1053 chr2R 25122941 25122986 chr2R 25123040 25123085 8 98 5.5 2.5 4.0 1.6 144 chr2R 25122941 intron lov - chr2R 25123013 intron lov - chr2R 25123085 intron lov - chr2R_8_25120001 chr2R_25120001 RAL-508 1054 chr2R 25141656 25141680 chr2R 25159358 25159389 roo 8 17709 0.0 3.0 1.5 3.2 17733 chr2R 25141656 intergenic not near genes chr2R 25150522 intergenic not near genes chr2R 25159389 intergenic not near genes chr2R_8_25150001 chr2R_25150001 RAL-508 1055 chr2R 25176880 25176918 chr2R 25177167 25177204 4 287 5.5 3.0 4.2 0.8 324 chr2R 25176880 intergenic Peb - chr2R 25177042 intergenic Peb - chr2R 25177204 intergenic Peb - chr2R_4_25175001 chr2R_25175001 RAL-508 1056 chr2R 25181100 25181133 chr2R 25181217 25181250 6 116 3.5 2.0 2.8 1.6 150 chr2R 25181100 intergenic not near genes chr2R 25181175 intergenic not near genes chr2R 25181250 intergenic not near genes chr2R_6_25180001 chr2R_25180001 RAL-508 1057 chr2R 25236016 25236045 chr2R 25236145 25236172 8 130 1.5 2.5 2.0 2.7 156 chr2R 25236016 intron CG9380 - chr2R 25236094 intron CG9380 - chr2R 25236172 intron CG9380 - chr2R_8_25235001 chr2R_25235001 RAL-508 1058 chr2R 25253429 25253478 chr2R 25253525 25253575 18 93 4.0 5.5 4.8 3.1 146 chr2R 25253429 intron,intron CG9380 -,CG30428 + chr2R 25253502 intron,intron CG9380 -,CG30428 + chr2R 25253575 intron,intron CG9380 -,CG30428 + chr2R_18_25250001 chr2R_25250001 RAL-508 1059 chr3L 33164 33191 chr3L 33381 33411 4 224 3.5 2.5 3.0 1.0 247 chr3L 33164 intergenic not near genes chr3L 33288 intergenic not near genes chr3L 33411 intergenic not near genes chr3L_4_30001 chr3L_30001 RAL-508 1060 chr3L 36409 36451 chr3L 36715 36754 4 305 0.0 3.0 1.5 1.6 345 chr3L 36409 intergenic not near genes chr3L 36582 intergenic not near genes chr3L 36754 intergenic not near genes chr3L_4_35001 chr3L_35001 RAL-508 1061 chr3L 68982 69015 chr3L 69070 69119 12 100 2.5 3.5 3.0 3.0 137 chr3L 68982 3` UTR Lsp1gamma + chr3L 69050 intergenic Lsp1gamma +,CR44510 + chr3L 69119 intergenic CR44510 +,Lsp1gamma + chr3L_12_65001 chr3L_65001 RAL-508 1062 chr3L 71912 71960 chr3L 72012 72060 23 101 5.5 5.0 5.2 3.7 148 chr3L 71912 intergenic CR43988 - chr3L 71986 intergenic CR43988 - chr3L 72060 intergenic CR43988 - chr3L_23_70001 chr3L_70001 RAL-508 1063 chr3L 99392 99436 chr3L 99527 99571 6 135 2.0 2.5 2.2 1.9 179 chr3L 99392 intergenic not near genes chr3L 99482 intergenic not near genes chr3L 99571 intergenic not near genes chr3L_6_95001 chr3L_95001 RAL-508 1064 chr3L 110194 110239 chr3L 119381 119425 roo 14 9182 3.5 2.5 3.0 3.5 9231 chr3L 110194 intergenic not near genes chr3L 114810 intergenic not near genes chr3L 119425 intergenic not near genes chr3L_14_110001 chr3L_110001 RAL-508 1065 chr3L 226840 226886 chr3L 226953 226998 11 112 5.5 3.0 4.2 2.1 158 chr3L 226840 5` UTR CR42862 + chr3L 226919 5` UTR CR42862 + chr3L 226998 5` UTR CR42862 + chr3L_11_225001 chr3L_225001 RAL-508 1066 chr3L 309204 309238 chr3L 309295 309331 4 94 9.5 3.0 6.2 0.6 127 chr3L 309204 exon fwd - chr3L 309268 exon fwd - chr3L 309331 exon fwd - chr3L_4_305001 chr3L_305001 RAL-508 1067 chr3L 366987 367034 chr3L 367095 367142 10 108 3.0 1.5 2.2 3.1 155 chr3L 366987 3` UTR trh - chr3L 367064 3` UTR trh - chr3L 367142 3` UTR trh - chr3L_10_365001 chr3L_365001 RAL-508 1068 chr3L 369853 369892 chr3L 369941 369993 14 97 2.0 3.5 2.8 3.7 140 chr3L 369853 intron trh - chr3L 369923 intron trh - chr3L 369993 intron trh - chr3L_14_365001 chr3L_365001 RAL-508 1069 chr3L 375243 375274 chr3L 375345 375348 6 96 0.0 7.0 3.5 1.3 105 chr3L 375243 intron trh - chr3L 375296 intron trh - chr3L 375348 intron trh - chr3L_6_375001 chr3L_375001 RAL-508 1070 chr3L 390941 390978 chr3L 391065 391077 11 120 4.0 6.0 5.0 1.8 136 chr3L 390941 intron trh - chr3L 391009 intron trh - chr3L 391077 intron trh - chr3L_11_390001 chr3L_390001 RAL-508 1071 chr3L 402670 402717 chr3L 409743 409782 297 20 7070 3.5 5.0 4.2 3.8 7112 chr3L 402670 intergenic not near genes chr3L 406226 intergenic not near genes chr3L 409782 intergenic not near genes chr3L_20_405001 chr3L_405001 RAL-508 1072 chr3L 498496 498506 chr3L 498594 498603 4 98 4.5 5.0 4.8 0.7 107 chr3L 498496 intron klar - chr3L 498550 intron klar - chr3L 498603 intron klar - chr3L_4_495001 chr3L_495001 RAL-508 1073 chr3L 534760 534807 chr3L 535035 535083 11 274 2.5 3.0 2.8 2.9 323 chr3L 534760 intron klar - chr3L 534922 intron klar - chr3L 535083 intron klar - chr3L_11_530001 chr3L_530001 RAL-508 1074 chr3L 603034 603053 chr3L 603137 603155 6 102 4.5 0.0 2.2 1.9 121 chr3L 603034 intron CG13893 - chr3L 603094 intron CG13893 - chr3L 603155 intron CG13893 - chr3L_6_600001 chr3L_600001 RAL-508 1075 chr3L 606883 606917 chr3L 606979 607016 4 98 5.0 3.0 4.0 0.8 133 chr3L 606883 intergenic Reg-2 - chr3L 606950 intergenic Reg-2 - chr3L 607016 intergenic Reg-2 - chr3L_4_605001 chr3L_605001 RAL-508 1076 chr3L 651369 651414 chr3L 651477 651522 16 107 6.0 3.5 4.8 2.8 153 chr3L 651369 intergenic Gale +,CG3402 - chr3L 651446 intergenic CG3402 -,Gale + chr3L 651522 intergenic CG3402 -,Gale + chr3L_16_650001 chr3L_650001 RAL-508 1077 chr3L 717907 717914 chr3L 717977 718023 5 86 0.0 2.0 1.0 2.5 116 chr3L 717907 intergenic not near genes chr3L 717965 intergenic not near genes chr3L 718023 intergenic not near genes chr3L_5_715001 chr3L_715001 RAL-508 1078 chr3L 732804 732814 chr3L 733054 733062 4 248 6.0 5.5 5.8 0.6 258 chr3L 732804 intergenic not near genes chr3L 732933 intergenic not near genes chr3L 733062 intergenic not near genes chr3L_4_730001 chr3L_730001 RAL-508 1079 chr3L 732820 732842 chr3L 733051 733093 8 243 3.0 5.5 4.2 1.5 273 chr3L 732820 intergenic not near genes chr3L 732956 intergenic not near genes chr3L 733093 intergenic not near genes chr3L_8_730001 chr3L_730001 RAL-508 1080 chr3L 789894 789904 chr3L 790399 790409 roo 7 505 1.5 0.0 0.8 3.9 515 chr3L 789894 intergenic not near genes chr3L 790152 intergenic not near genes chr3L 790409 intergenic not near genes chr3L_7_790001 chr3L_790001 RAL-508 1081 chr3L 832586 832600 chr3L 832686 832699 4 100 8.5 1.0 4.8 0.7 113 chr3L 832586 intron,3` UTR CG13900 -,snoRNA:Psi28S-3308 - chr3L 832642 intron CG13900 - chr3L 832699 intron CG13900 - chr3L_4_830001 chr3L_830001 RAL-508 1082 chr3L 832601 832630 chr3L 832684 832715 8 92 3.5 1.0 2.2 2.5 114 chr3L 832601 intron,3` UTR CG13900 -,snoRNA:Psi28S-3308 - chr3L 832658 intron CG13900 - chr3L 832715 exon CG13900 - chr3L_8_830001 chr3L_830001 RAL-508 1083 chr3L 925159 925208 chr3L 932605 932654 mdg1 9 7446 2.5 2.5 2.5 2.6 7495 chr3L 925159 intron Glut1 + chr3L 928906 intron Glut1 + chr3L 932654 intron Glut1 + chr3L_9_925001 chr3L_925001 RAL-508 1084 chr3L 933906 933943 chr3L 934029 934066 10 119 1.5 5.5 3.5 2.2 160 chr3L 933906 intron Glut1 + chr3L 933986 intron Glut1 + chr3L 934066 intron Glut1 + chr3L_10_930001 chr3L_930001 RAL-508 1085 chr3L 939766 939800 chr3L 940893 940918 jockey 6 1129 8.0 4.5 6.2 0.8 1152 chr3L 939766 intron Glut1 + chr3L 940342 intron Glut1 + chr3L 940918 intron Glut1 + chr3L_6_940001 chr3L_940001 RAL-508 1086 chr3L 947729 947755 chr3L 947830 947860 8 102 5.0 3.0 4.0 1.6 131 chr3L 947729 intron Glut1 + chr3L 947794 intron Glut1 + chr3L 947860 intron Glut1 + chr3L_8_945001 chr3L_945001 RAL-508 1087 chr3L 961001 961042 chr3L 961114 961155 8 113 2.0 1.5 1.8 2.9 154 chr3L 961001 intron Glut1 + chr3L 961078 intron Glut1 + chr3L 961155 intron Glut1 + chr3L_8_960001 chr3L_960001 RAL-508 1088 chr3L 1011211 1011224 chr3L 1011325 1011334 7 113 2.0 4.0 3.0 1.8 123 chr3L 1011211 intron trio - chr3L 1011272 intron trio - chr3L 1011334 intron trio - chr3L_7_1010001 chr3L_1010001 RAL-508 1089 chr3L 1015006 1015054 chr3L 1015138 1015139 6 109 4.0 6.0 5.0 1.0 133 chr3L 1015006 intron trio - chr3L 1015072 intron trio - chr3L 1015139 intron trio - chr3L_6_1015001 chr3L_1015001 RAL-508 1090 chr3L 1021574 1021630 chr3L 1021669 1021708 17 85 4.0 5.5 4.8 2.9 134 chr3L 1021574 intron trio - chr3L 1021641 intron trio - chr3L 1021708 intron trio - chr3L_17_1020001 chr3L_1020001 RAL-508 1091 chr3L 1047343 1047385 chr3L 1055168 1055217 412 6 7825 3.5 5.5 4.5 1.1 7874 chr3L 1047343 intron bab1 - chr3L 1051280 intron bab1 - chr3L 1055217 intron bab1 - chr3L_6_1050001 chr3L_1050001 RAL-508 1092 chr3L 1089448 1089494 chr3L 1089575 1089619 19 128 2.5 1.0 1.8 6.8 171 chr3L 1089448 intron bab1 - chr3L 1089534 intron bab1 - chr3L 1089619 intron bab1 - chr3L_19_1085001 chr3L_1085001 RAL-508 1093 chr3L 1103980 1104013 chr3L 1104188 1104222 14 207 5.5 6.0 5.8 2.1 242 chr3L 1103980 intergenic not near genes chr3L 1104101 intergenic not near genes chr3L 1104222 intergenic not near genes chr3L_14_1100001 chr3L_1100001 RAL-508 1094 chr3L 1145226 1145254 chr3L 1145325 1145351 5 99 4.5 0.0 2.2 1.6 125 chr3L 1145226 intron bab2 - chr3L 1145288 intron bab2 - chr3L 1145351 intron bab2 - chr3L_5_1145001 chr3L_1145001 RAL-508 1095 chr3L 1154122 1154161 chr3L 1163292 1163331 roo 9 9170 2.5 4.5 3.5 2.0 9209 chr3L 1154122 intron bab2 - chr3L 1158726 intron bab2 - chr3L 1163331 intron bab2 - chr3L_9_1155001 chr3L_1155001 RAL-508 1096 chr3L 1219576 1219620 chr3L 1227329 1227351 412 12 7743 2.0 3.0 2.5 3.4 7775 chr3L 1219576 intron mwh + chr3L 1223464 intron mwh + chr3L 1227351 intron mwh + chr3L_12_1220001 chr3L_1220001 RAL-508 1097 chr3L 1310981 1311012 chr3L 1315821 1315873 8 4848 24.5 32.5 28.5 0.3 4892 chr3L 1310981 exon CG2469 + chr3L 1313427 intergenic CG9186 -,CG9153 + chr3L 1315873 exon CG9153 + chr3L_8_1310001 chr3L_1310001 RAL-508 1098 chr3L 1324604 1324642 chr3L 1324701 1324740 5 98 1.0 3.0 2.0 1.7 136 chr3L 1324604 intron Myo61F + chr3L 1324672 intron Myo61F + chr3L 1324740 intron Myo61F + chr3L_5_1320001 chr3L_1320001 RAL-508 1099 chr3L 1347156 1347189 chr3L 1347257 1347286 11 96 3.0 4.0 3.5 2.4 130 chr3L 1347156 intron Ptp61F - chr3L 1347221 intron Ptp61F - chr3L 1347286 intron Ptp61F - chr3L_11_1345001 chr3L_1345001 RAL-508 1100 chr3L 1357115 1357152 chr3L 1357197 1357251 7 85 4.5 3.0 3.8 1.5 136 chr3L 1357115 intron Ptp61F - chr3L 1357183 intron Ptp61F - chr3L 1357251 intron Ptp61F - chr3L_7_1355001 chr3L_1355001 RAL-508 1101 chr3L 1364014 1364066 chr3L 1364120 1364172 9 105 0.0 4.5 2.2 2.8 158 chr3L 1364014 intron Ptp61F - chr3L 1364093 intron Ptp61F - chr3L 1364172 intron Ptp61F - chr3L_9_1360001 chr3L_1360001 RAL-508 1102 chr3L 1396732 1396756 chr3L 1396836 1396860 8 102 22.0 25.0 23.5 0.3 128 chr3L 1396732 intron Ptp61F - chr3L 1396796 intron Ptp61F - chr3L 1396860 intron Ptp61F - chr3L_8_1395001 chr3L_1395001 RAL-508 1103 chr3L 1415737 1415771 chr3L 1415857 1415886 9 116 1.5 4.0 2.8 2.4 149 chr3L 1415737 intron Ptp61F - chr3L 1415812 intron Ptp61F - chr3L 1415886 intron Ptp61F - chr3L_9_1415001 chr3L_1415001 RAL-508 1104 chr3L 1485729 1485742 chr3L 1486914 1486932 1360 4 1185 5.0 8.5 6.8 0.5 1203 chr3L 1485729 intron stet - chr3L 1486330 intron stet - chr3L 1486932 intron stet - chr3L_4_1485001 chr3L_1485001 RAL-508 1105 chr3L 1505980 1506016 chr3L 1513596 1513633 17.6 9 7615 6.5 7.0 6.8 1.2 7653 chr3L 1505980 intron,intron Psa +,cue - chr3L 1509806 intron,intron Psa +,cue - chr3L 1513633 intron,intron Psa +,cue - chr3L_9_1505001 chr3L_1505001 RAL-508 1106 chr3L 1585923 1585938 chr3L 1586024 1586039 5 101 3.0 0.0 1.5 2.0 116 chr3L 1585923 intron CG13917 + chr3L 1585981 intron CG13917 + chr3L 1586039 intron CG13917 + chr3L_5_1585001 chr3L_1585001 RAL-508 1107 chr3L 1625994 1626038 chr3L 1626128 1626172 10 130 4.0 2.0 3.0 2.5 178 chr3L 1625994 intron,3` UTR GC -,CG13928 - chr3L 1626083 intron,3` UTR GC -,CG13928 - chr3L 1626172 intron,3` UTR GC -,CG13928 - chr3L_10_1625001 chr3L_1625001 RAL-508 1108 chr3L 1632890 1632914 chr3L 1632986 1633010 5 96 1.0 10.5 5.8 0.7 120 chr3L 1632890 intron nSyb - chr3L 1632950 intron nSyb - chr3L 1633010 intron nSyb - chr3L_5_1630001 chr3L_1630001 RAL-508 1109 chr3L 1688229 1688265 chr3L 1688378 1688414 7 148 3.0 0.0 1.5 2.8 185 chr3L 1688229 intron CG7991 + chr3L 1688322 intron CG7991 + chr3L 1688414 intron CG7991 + chr3L_7_1685001 chr3L_1685001 RAL-508 1110 chr3L 1740846 1740879 chr3L 1741109 1741125 pogo 11 261 4.5 6.0 5.2 1.8 279 chr3L 1740846 intron Gk + chr3L 1740986 intron Gk + chr3L 1741125 intron Gk + chr3L_11_1740001 chr3L_1740001 RAL-508 1111 chr3L 1754675 1754716 chr3L 1754808 1754844 14 135 5.0 5.0 5.0 2.3 169 chr3L 1754675 intron Cht2 - chr3L 1754760 intron Cht2 - chr3L 1754844 intron Cht2 - chr3L_14_1750001 chr3L_1750001 RAL-508 1112 chr3L 1853025 1853043 chr3L 1853129 1853146 5 104 5.5 3.5 4.5 0.9 121 chr3L 1853025 intron CG13936 - chr3L 1853086 intron CG13936 - chr3L 1853146 intron CG13936 - chr3L_5_1850001 chr3L_1850001 RAL-508 1113 chr3L 1882345 1882382 chr3L 1882461 1882496 6 115 4.0 5.5 4.8 1.0 151 chr3L 1882345 intron CG13937 - chr3L 1882420 intron CG13937 - chr3L 1882496 intron CG13937 - chr3L_6_1880001 chr3L_1880001 RAL-508 1114 chr3L 1905356 1905373 chr3L 1905470 1905487 4 110 2.5 10.0 6.2 0.6 131 chr3L 1905356 intron CG1887 - chr3L 1905422 intron CG1887 - chr3L 1905487 intron CG1887 - chr3L_4_1905001 chr3L_1905001 RAL-508 1115 chr3L 1922431 1922444 chr3L 1922531 1922544 5 99 6.0 7.5 6.8 0.6 113 chr3L 1922431 intron Dbx + chr3L 1922488 intron Dbx + chr3L 1922544 intron Dbx + chr3L_5_1920001 chr3L_1920001 RAL-508 1116 chr3L 1989682 1989705 chr3L 1989814 1989836 7 131 7.5 4.0 5.8 1.0 154 chr3L 1989682 intergenic not near genes chr3L 1989759 intergenic not near genes chr3L 1989836 intergenic not near genes chr3L_7_1985001 chr3L_1985001 RAL-508 1117 chr3L 2023898 2023945 chr3L 2024002 2024033 6 100 4.0 4.0 4.0 1.2 135 chr3L 2023898 intergenic not near genes chr3L 2023966 intergenic not near genes chr3L 2024033 intergenic not near genes chr3L_6_2020001 chr3L_2020001 RAL-508 1118 chr3L 2139189 2139233 chr3L 2139289 2139328 12 100 3.0 7.5 5.2 1.9 139 chr3L 2139189 intron zormin - chr3L 2139258 intron zormin - chr3L 2139328 intron zormin - chr3L_12_2135001 chr3L_2135001 RAL-508 1119 chr3L 2186335 2186362 chr3L 2186430 2186449 7 94 4.0 9.5 6.8 0.9 114 chr3L 2186335 exon CG13810 + chr3L 2186392 intron CG13810 + chr3L 2186449 intron CG13810 + chr3L_7_2185001 chr3L_2185001 RAL-508 1120 chr3L 2186363 2186377 chr3L 2186426 2186473 7 90 2.5 8.5 5.5 1.1 110 chr3L 2186363 exon CG13810 + chr3L 2186418 intron CG13810 + chr3L 2186473 intron CG13810 + chr3L_7_2185001 chr3L_2185001 RAL-508 1121 chr3L 2272910 2272932 chr3L 2272981 2273030 4 77 2.5 3.0 2.8 1.1 120 chr3L 2272910 intergenic yellow-g - chr3L 2272970 intergenic yellow-g - chr3L 2273030 intergenic yellow-g - chr3L_4_2270001 chr3L_2270001 RAL-508 1122 chr3L 2282974 2283021 chr3L 2283067 2283117 8 95 1.5 4.5 3.0 2.0 143 chr3L 2282974 5` UTR MsR2 + chr3L 2283046 5` UTR MsR2 + chr3L 2283117 5` UTR MsR2 + chr3L_8_2280001 chr3L_2280001 RAL-508 1123 chr3L 2293375 2293415 chr3L 2293470 2293488 14 90 6.0 4.0 5.0 2.3 113 chr3L 2293375 intron MsR2 + chr3L 2293432 intron MsR2 + chr3L 2293488 intron MsR2 + chr3L_14_2290001 chr3L_2290001 RAL-508 1124 chr3L 2307982 2308035 chr3L 2308108 2308137 12 120 7.0 2.5 4.8 2.1 155 chr3L 2307982 intergenic not near genes chr3L 2308060 intergenic not near genes chr3L 2308137 intergenic not near genes chr3L_12_2305001 chr3L_2305001 RAL-508 1125 chr3L 2311979 2312009 chr3L 2314549 2314580 11 2570 4.0 2.5 3.2 2.6 2601 chr3L 2311979 intergenic not near genes chr3L 2313280 intergenic not near genes chr3L 2314580 intergenic not near genes chr3L_11_2310001 chr3L_2310001 RAL-508 1126 chr3L 2331562 2331573 chr3L 2331659 2331660 5 94 8.0 2.5 5.2 0.8 98 chr3L 2331562 intron MsR1 + chr3L 2331611 intron MsR1 + chr3L 2331660 intron MsR1 + chr3L_5_2330001 chr3L_2330001 RAL-508 1127 chr3L 2331578 2331615 chr3L 2331658 2331710 11 93 2.0 2.5 2.2 3.4 132 chr3L 2331578 intron MsR1 + chr3L 2331644 intron MsR1 + chr3L 2331710 intron MsR1 + chr3L_11_2330001 chr3L_2330001 RAL-508 1128 chr3L 2447485 2447527 chr3L 2456661 2456703 roo 6 9171 6.5 5.0 5.8 0.9 9218 chr3L 2447485 intron CG45186 + chr3L 2452094 intron CG45186 + chr3L 2456703 intron CG45186 + chr3L_6_2450001 chr3L_2450001 RAL-508 1129 chr3L 2493805 2493847 chr3L 2493903 2493953 9 103 2.0 0.0 1.0 4.5 148 chr3L 2493805 intron CG45186 + chr3L 2493879 intron CG45186 + chr3L 2493953 intron CG45186 + chr3L_9_2490001 chr3L_2490001 RAL-508 1130 chr3L 2515402 2515416 chr3L 2515504 2515515 4 101 4.0 10.0 7.0 0.5 113 chr3L 2515402 intron Spn - chr3L 2515458 intron Spn - chr3L 2515515 intron Spn - chr3L_4_2515001 chr3L_2515001 RAL-508 1131 chr3L 2533636 2533678 chr3L 2533738 2533758 10 96 3.0 10.0 6.5 1.3 122 chr3L 2533636 intron Spn - chr3L 2533697 intron Spn - chr3L 2533758 intron Spn - chr3L_10_2530001 chr3L_2530001 RAL-508 1132 chr3L 2581878 2581904 chr3L 2581992 2582018 6 114 4.0 4.0 4.0 1.2 140 chr3L 2581878 intron msn - chr3L 2581948 intron msn - chr3L 2582018 intron msn - chr3L_6_2580001 chr3L_2580001 RAL-508 1133 chr3L 2595573 2595609 chr3L 2595679 2595714 10 105 4.0 7.5 5.8 1.5 141 chr3L 2595573 3` UTR dos + chr3L 2595644 intergenic dos +,CG16984 +,CG12182 - chr3L 2595714 intergenic CG16984 +,dos +,CG12182 - chr3L_10_2595001 chr3L_2595001 RAL-508 1134 chr3L 2617249 2617257 chr3L 2617349 2617362 6 105 2.0 5.0 3.5 1.3 113 chr3L 2617249 intron Pxn - chr3L 2617306 intron Pxn - chr3L 2617362 intron Pxn - chr3L_6_2615001 chr3L_2615001 RAL-508 1135 chr3L 2621173 2621180 chr3L 2621266 2621276 5 95 8.5 1.5 5.0 0.8 103 chr3L 2621173 intron Pxn - chr3L 2621224 intron Pxn - chr3L 2621276 intron Pxn - chr3L_5_2620001 chr3L_2620001 RAL-508 1136 chr3L 2683929 2683976 chr3L 2684020 2684072 15 95 7.0 2.5 4.8 2.6 143 chr3L 2683929 intron Fife - chr3L 2684000 intron Fife - chr3L 2684072 intron Fife - chr3L_15_2680001 chr3L_2680001 RAL-508 1137 chr3L 2719516 2719560 chr3L 2719637 2719676 11 121 2.0 2.0 2.0 3.7 160 chr3L 2719516 3` UTR Mrtf - chr3L 2719596 3` UTR Mrtf - chr3L 2719676 3` UTR Mrtf - chr3L_11_2715001 chr3L_2715001 RAL-508 1138 chr3L 2795704 2795748 chr3L 2795847 2795891 10 141 2.0 2.0 2.0 3.3 187 chr3L 2795704 intron CG43444 - chr3L 2795798 intron CG43444 - chr3L 2795891 intron CG43444 - chr3L_10_2795001 chr3L_2795001 RAL-508 1139 chr3L 2854475 2854502 chr3L 2854555 2854573 7 81 4.5 1.0 2.8 1.8 98 chr3L 2854475 intron CG43444 - chr3L 2854524 intron CG43444 - chr3L 2854573 intron CG43444 - chr3L_7_2850001 chr3L_2850001 RAL-508 1140 chr3L 2910096 2910102 chr3L 18097007 18097012 4 15186910 5.5 17.0 11.2 0.3 15186916 chr3L 2910096 intron Shab + chr3L 10503554 intron A2bp1 + chr3L 18097012 intron CG13698 - chr3L_4_10500001 chr3L_10500001 RAL-508 1141 chr3L 2927819 2927864 chr3L 2936116 2936141 Tirant 10 8294 3.5 1.5 2.5 2.9 8322 chr3L 2927819 intron Shab + chr3L 2931980 intron Shab + chr3L 2936141 intron Shab + chr3L_10_2930001 chr3L_2930001 RAL-508 1142 chr3L 3027019 3027025 chr3L 3027399 3027440 5 401 1.5 3.5 2.5 1.4 421 chr3L 3027019 intergenic aly - chr3L 3027230 intergenic not near genes chr3L 3027440 intergenic not near genes chr3L_5_3025001 chr3L_3025001 RAL-508 1143 chr3L 3040308 3040342 chr3L 3042116 3042151 S-element 7 1808 4.0 0.5 2.2 2.2 1843 chr3L 3040308 3` UTR CG2162 + chr3L 3041230 intergenic not near genes chr3L 3042151 intergenic Jafrac2 + chr3L_7_3040001 chr3L_3040001 RAL-508 1144 chr3L 3051727 3051750 chr3L 3051988 3052012 pogo 6 262 6.0 6.0 6.0 0.9 285 chr3L 3051727 3` UTR CG32485 + chr3L 3051870 intergenic CG32485 + chr3L 3052012 intergenic CG32485 + chr3L_6_3050001 chr3L_3050001 RAL-508 1145 chr3L 3259821 3259831 chr3L 3259941 3259951 5 120 0.0 9.5 4.8 0.9 130 chr3L 3259821 intron ckd + chr3L 3259886 intron ckd + chr3L 3259951 intron ckd + chr3L_5_3255001 chr3L_3255001 RAL-508 1146 chr3L 3281444 3281467 chr3L 3281932 3281983 Doc 8 511 3.5 3.5 3.5 1.8 539 chr3L 3281444 intron CG12017 + chr3L 3281714 intron CG12017 + chr3L 3281983 intron CG12017 + chr3L_8_3280001 chr3L_3280001 RAL-508 1147 chr3L 3310277 3310326 chr3L 3310376 3310421 20 94 4.0 4.5 4.2 3.8 144 chr3L 3310277 intron ZnT63C + chr3L 3310349 intron ZnT63C + chr3L 3310421 intron ZnT63C + chr3L_20_3310001 chr3L_3310001 RAL-508 1148 chr3L 3317515 3317552 chr3L 3317614 3317640 8 96 0.5 2.5 1.5 3.2 125 chr3L 3317515 intergenic Drsl5 + chr3L 3317578 intergenic Drsl5 +,PIG-C - chr3L 3317640 intergenic PIG-C -,Drsl5 + chr3L_8_3315001 chr3L_3315001 RAL-508 1149 chr3L 3392976 3393026 chr3L 3393079 3393127 9 99 4.0 4.0 4.0 1.8 151 chr3L 3392976 intergenic not near genes chr3L 3393052 intergenic not near genes chr3L 3393127 intergenic not near genes chr3L_9_3390001 chr3L_3390001 RAL-508 1150 chr3L 3436271 3436314 chr3L 3436370 3436413 9 99 3.0 2.5 2.8 2.4 142 chr3L 3436271 intron eIF5B - chr3L 3436342 intron eIF5B - chr3L 3436413 intron eIF5B - chr3L_9_3435001 chr3L_3435001 RAL-508 1151 chr3L 3451362 3451382 chr3L 3451482 3451502 4 118 1.5 3.5 2.5 1.1 140 chr3L 3451362 intron eIF5B - chr3L 3451432 intron eIF5B - chr3L 3451502 intron eIF5B - chr3L_4_3450001 chr3L_3450001 RAL-508 1152 chr3L 3475055 3475103 chr3L 3475518 3475548 jockey 6 460 2.0 3.5 2.8 1.6 493 chr3L 3475055 intron CG42324 + chr3L 3475302 intron CG42324 + chr3L 3475548 intron CG42324 + chr3L_6_3475001 chr3L_3475001 RAL-508 1153 chr3L 3484362 3484404 chr3L 3484557 3484600 16 195 4.0 6.5 5.2 2.6 238 chr3L 3484362 intron,exon CG42324 +,CG43074 - chr3L 3484481 intron,exon CG42324 +,CG43074 - chr3L 3484600 intron,exon CG42324 +,CG43074 - chr3L_16_3480001 chr3L_3480001 RAL-508 1154 chr3L 3512312 3512349 chr3L 3512448 3512479 13 131 8.5 6.5 7.5 1.5 167 chr3L 3512312 exon ImpE2 - chr3L 3512396 exon ImpE2 - chr3L 3512479 exon ImpE2 - chr3L_13_3510001 chr3L_3510001 RAL-508 1155 chr3L 3565930 3565961 chr3L 3566024 3566038 7 86 4.0 11.0 7.5 0.8 108 chr3L 3565930 intron Eip63E + chr3L 3565984 intron Eip63E + chr3L 3566038 intron Eip63E + chr3L_7_3565001 chr3L_3565001 RAL-508 1156 chr3L 3577716 3577763 chr3L 3577814 3577861 19 97 3.0 4.0 3.5 4.2 145 chr3L 3577716 intron Eip63E + chr3L 3577788 intron Eip63E + chr3L 3577861 intron Eip63E + chr3L_19_3575001 chr3L_3575001 RAL-508 1157 chr3L 3596465 3596513 chr3L 3596652 3596703 26 185 2.5 4.0 3.2 6.2 238 chr3L 3596465 intron Eip63E + chr3L 3596584 intron Eip63E + chr3L 3596703 intron Eip63E + chr3L_26_3595001 chr3L_3595001 RAL-508 1158 chr3L 3601278 3601328 chr3L 3606609 3606659 copia 13 5330 4.5 5.5 5.0 2.2 5381 chr3L 3601278 intron Eip63E + chr3L 3603968 intron Eip63E + chr3L 3606659 intron Eip63E + chr3L_13_3600001 chr3L_3600001 RAL-508 1159 chr3L 3627216 3627260 chr3L 3627341 3627385 11 125 3.0 3.0 3.0 2.8 169 chr3L 3627216 intron dar1 + chr3L 3627300 intron dar1 + chr3L 3627385 intron dar1 + chr3L_11_3625001 chr3L_3625001 RAL-508 1160 chr3L 3656982 3657031 chr3L 3657080 3657129 9 93 3.5 3.0 3.2 2.1 147 chr3L 3656982 intergenic not near genes chr3L 3657056 intergenic not near genes chr3L 3657129 intergenic not near genes chr3L_9_3655001 chr3L_3655001 RAL-508 1161 chr3L 3682605 3682618 chr3L 3682694 3682738 9 102 6.5 3.5 5.0 1.5 133 chr3L 3682605 intergenic not near genes chr3L 3682672 intergenic not near genes chr3L 3682738 intergenic not near genes chr3L_9_3680001 chr3L_3680001 RAL-508 1162 chr3L 3766727 3766738 chr3L 3766833 3766844 4 106 5.0 0.0 2.5 1.1 117 chr3L 3766727 intron CG32264 - chr3L 3766786 intron CG32264 - chr3L 3766844 intron CG32264 - chr3L_4_3765001 chr3L_3765001 RAL-508 1163 chr3L 3783252 3783269 chr3L 3783348 3783363 6 96 5.0 1.5 3.2 1.4 111 chr3L 3783252 intron CG32264 - chr3L 3783308 intron CG32264 - chr3L 3783363 intron CG32264 - chr3L_6_3780001 chr3L_3780001 RAL-508 1164 chr3L 3795482 3795532 chr3L 3795675 3795724 12 193 3.5 3.5 3.5 2.7 242 chr3L 3795482 intron CG32264 - chr3L 3795603 intron CG32264 - chr3L 3795724 intron CG32264 - chr3L_12_3795001 chr3L_3795001 RAL-508 1165 chr3L 3797239 3797266 chr3L 3797321 3797369 4 98 1.0 1.0 1.0 2.0 130 chr3L 3797239 intron CG32264 - chr3L 3797304 intron CG32264 - chr3L 3797369 intron CG32264 - chr3L_4_3795001 chr3L_3795001 RAL-508 1166 chr3L 3815033 3815078 chr3L 3815134 3815179 13 98 2.5 2.0 2.2 4.1 146 chr3L 3815033 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815106 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815179 intron,intron Scsalpha +,CR43932 - chr3L_13_3815001 chr3L_3815001 RAL-508 1167 chr3L 3833729 3833741 chr3L 3833989 3834002 pogo 5 261 2.5 1.0 1.8 1.8 273 chr3L 3833729 intron enc + chr3L 3833866 intron enc + chr3L 3834002 intron enc + chr3L_5_3830001 chr3L_3830001 RAL-508 1168 chr3L 3890944 3890986 chr3L 3891042 3891087 10 99 3.5 0.0 1.8 3.6 143 chr3L 3890944 intergenic not near genes chr3L 3891016 intergenic not near genes chr3L 3891087 intergenic not near genes chr3L_10_3890001 chr3L_3890001 RAL-508 1169 chr3L 4146803 4146840 chr3L 4146905 4146942 6 100 0.0 3.5 1.8 2.1 139 chr3L 4146803 intergenic not near genes chr3L 4146872 intergenic not near genes chr3L 4146942 intergenic not near genes chr3L_6_4145001 chr3L_4145001 RAL-508 1170 chr3L 4299732 4299783 chr3L 4300129 4300181 15 396 2.5 3.5 3.0 3.8 449 chr3L 4299732 intron dyl - chr3L 4299956 intron dyl - chr3L 4300181 intron dyl - chr3L_15_4295001 chr3L_4295001 RAL-508 1171 chr3L 4328734 4328765 chr3L 4336243 4336259 412 9 7514 3.0 6.0 4.5 1.6 7525 chr3L 4328734 intron Cip4 - chr3L 4332496 intron Cip4 - chr3L 4336259 intron Cip4 - chr3L_9_4330001 chr3L_4330001 RAL-508 1172 chr3L 4342388 4342435 chr3L 4342487 4342515 11 95 7.0 1.0 4.0 2.2 127 chr3L 4342388 intron Cip4 - chr3L 4342452 intron Cip4 - chr3L 4342515 intron Cip4 - chr3L_11_4340001 chr3L_4340001 RAL-508 1173 chr3L 4441813 4441860 chr3L 4441912 4441958 9 97 10.5 3.5 7.0 1.1 145 chr3L 4441813 intergenic not near genes chr3L 4441886 intergenic not near genes chr3L 4441958 intergenic not near genes chr3L_9_4440001 chr3L_4440001 RAL-508 1174 chr3L 4516828 4516857 chr3L 4516923 4516954 8 97 2.5 2.5 2.5 2.3 126 chr3L 4516828 intron Tie - chr3L 4516891 intron Tie - chr3L 4516954 intron Tie - chr3L_8_4515001 chr3L_4515001 RAL-508 1175 chr3L 4519411 4519443 chr3L 4519508 4519539 16 96 10.5 2.0 6.2 2.2 128 chr3L 4519411 intron Tie - chr3L 4519475 intron Tie - chr3L 4519539 intron Tie - chr3L_16_4515001 chr3L_4515001 RAL-508 1176 chr3L 4580284 4580320 chr3L 4580390 4580404 7 102 5.5 2.0 3.8 1.5 120 chr3L 4580284 intron CG42540 + chr3L 4580344 intron CG42540 + chr3L 4580404 intron CG42540 + chr3L_7_4580001 chr3L_4580001 RAL-508 1177 chr3L 4580330 4580335 chr3L 4580416 4580441 4 95 3.0 8.0 5.5 0.6 111 chr3L 4580330 intron CG42540 + chr3L 4580386 intron CG42540 + chr3L 4580441 intron CG42540 + chr3L_4_4580001 chr3L_4580001 RAL-508 1178 chr3L 4597196 4597244 chr3L 4597298 4597346 11 97 3.0 3.5 3.2 2.6 150 chr3L 4597196 intron Src64B - chr3L 4597271 intron Src64B - chr3L 4597346 intron Src64B - chr3L_11_4595001 chr3L_4595001 RAL-508 1179 chr3L 4607247 4607292 chr3L 4607358 4607403 9 110 3.5 3.5 3.5 2.0 156 chr3L 4607247 intron Src64B - chr3L 4607325 intron Src64B - chr3L 4607403 intron Src64B - chr3L_9_4605001 chr3L_4605001 RAL-508 1180 chr3L 4744384 4744407 chr3L 4744484 4744506 7 96 10.5 0.0 5.2 1.1 122 chr3L 4744384 intron RhoGEF64C + chr3L 4744445 intron RhoGEF64C + chr3L 4744506 intron RhoGEF64C + chr3L_7_4740001 chr3L_4740001 RAL-508 1181 chr3L 4858289 4858331 chr3L 4858399 4858437 9 102 5.5 2.5 4.0 1.8 148 chr3L 4858289 intergenic not near genes chr3L 4858363 intergenic not near genes chr3L 4858437 intergenic not near genes chr3L_9_4855001 chr3L_4855001 RAL-508 1182 chr3L 4876361 4876374 chr3L 4876465 4876478 6 104 10.5 5.5 8.0 0.7 117 chr3L 4876361 intron CG17150 + chr3L 4876420 intron CG17150 + chr3L 4876478 intron CG17150 + chr3L_6_4875001 chr3L_4875001 RAL-508 1183 chr3L 4901110 4901137 chr3L 4907320 4907345 diver 9 6209 3.5 3.0 3.2 2.1 6235 chr3L 4901110 intergenic CG13704 + chr3L 4904228 intergenic not near genes chr3L 4907345 intergenic not near genes chr3L_9_4900001 chr3L_4900001 RAL-508 1184 chr3L 4901146 4901159 chr3L 4907314 4907368 diver 4 6196 3.5 3.0 3.2 1.0 6222 chr3L 4901146 intergenic CG13704 + chr3L 4904257 intergenic not near genes chr3L 4907368 intergenic not near genes chr3L_4_4900001 chr3L_4900001 RAL-508 1185 chr3L 4908897 4908928 chr3L 4909025 4909055 12 128 2.5 7.0 4.8 2.1 158 chr3L 4908897 intergenic not near genes chr3L 4908976 intergenic not near genes chr3L 4909055 intergenic not near genes chr3L_12_4905001 chr3L_4905001 RAL-508 1186 chr3L 4990739 4990770 chr3L 4990857 4990883 11 118 5.5 1.5 3.5 2.4 144 chr3L 4990739 intron Con - chr3L 4990811 intron Con - chr3L 4990883 intron Con - chr3L_11_4990001 chr3L_4990001 RAL-508 1187 chr3L 5034148 5034191 chr3L 5043320 5043362 roo 6 9172 2.5 4.5 3.5 1.3 9214 chr3L 5034148 intron Con - chr3L 5038755 intron Con - chr3L 5043362 intron Con - chr3L_6_5035001 chr3L_5035001 RAL-508 1188 chr3L 5045444 5045468 chr3L 5050240 5050269 Doc 5 4796 5.5 3.0 4.2 1.0 4825 chr3L 5045444 intron Con - chr3L 5047856 intron Con - chr3L 5050269 intron Con - chr3L_5_5045001 chr3L_5045001 RAL-508 1189 chr3L 5054930 5054942 chr3L 5055027 5055042 5 96 3.0 8.0 5.5 0.8 112 chr3L 5054930 intron Con - chr3L 5054986 intron Con - chr3L 5055042 intron Con - chr3L_5_5050001 chr3L_5050001 RAL-508 1190 chr3L 5101191 5101229 chr3L 5101290 5101328 9 100 1.5 3.5 2.5 2.6 137 chr3L 5101191 intergenic not near genes chr3L 5101260 intergenic not near genes chr3L 5101328 intergenic not near genes chr3L_9_5100001 chr3L_5100001 RAL-508 1191 chr3L 5104462 5104510 chr3L 5124616 5124664 19 20153 2.0 2.5 2.2 5.9 20202 chr3L 5104462 intergenic not near genes chr3L 5114563 intergenic not near genes chr3L 5124664 intergenic not near genes chr3L_19_5110001 chr3L_5110001 RAL-508 1192 chr3L 5130908 5130952 chr3L 5131031 5131068 17 117 8.5 3.0 5.8 2.5 160 chr3L 5130908 intergenic not near genes chr3L 5130988 intergenic not near genes chr3L 5131068 intergenic CG15212 + chr3L_17_5130001 chr3L_5130001 RAL-508 1193 chr3L 5212223 5212262 chr3L 5212325 5212365 14 95 4.5 2.5 3.5 3.1 142 chr3L 5212223 intron shep - chr3L 5212294 intron shep - chr3L 5212365 intron shep - chr3L_14_5210001 chr3L_5210001 RAL-508 1194 chr3L 5246130 5246180 chr3L 5246228 5246281 15 100 7.0 4.0 5.5 2.3 151 chr3L 5246130 intron shep - chr3L 5246206 intron shep - chr3L 5246281 intron shep - chr3L_15_5245001 chr3L_5245001 RAL-508 1195 chr3L 5251845 5251865 chr3L 5251944 5251963 4 98 1.5 3.5 2.5 1.1 118 chr3L 5251845 intron shep - chr3L 5251904 intron shep - chr3L 5251963 intron shep - chr3L_4_5250001 chr3L_5250001 RAL-508 1196 chr3L 5261152 5261175 chr3L 5261251 5261273 6 99 3.0 5.0 4.0 1.2 121 chr3L 5261152 intron shep - chr3L 5261212 intron shep - chr3L 5261273 intron shep - chr3L_6_5260001 chr3L_5260001 RAL-508 1197 chr3L 5327442 5327476 chr3L 5327547 5327581 10 105 4.0 4.0 4.0 2.0 139 chr3L 5327442 intergenic not near genes chr3L 5327512 intergenic not near genes chr3L 5327581 intergenic not near genes chr3L_10_5325001 chr3L_5325001 RAL-508 1198 chr3L 5393456 5393474 chr3L 5393638 5393647 4 180 2.0 0.0 1.0 2.0 191 chr3L 5393456 intergenic not near genes chr3L 5393552 intergenic not near genes chr3L 5393647 intergenic not near genes chr3L_4_5390001 chr3L_5390001 RAL-508 1199 chr3L 5396457 5396497 chr3L 5396564 5396600 7 106 3.5 3.5 3.5 1.6 143 chr3L 5396457 intergenic not near genes chr3L 5396528 intergenic not near genes chr3L 5396600 intergenic not near genes chr3L_7_5395001 chr3L_5395001 RAL-508 1200 chr3L 5449513 5449554 chr3L 5449612 5449638 8 97 3.5 3.0 3.2 1.9 125 chr3L 5449513 intergenic not near genes chr3L 5449576 intergenic not near genes chr3L 5449638 intergenic not near genes chr3L_8_5445001 chr3L_5445001 RAL-508 1201 chr3L 5482947 5482978 chr3L 5483159 5483183 5 212 2.0 28.5 15.2 0.3 236 chr3L 5482947 exon CG4835 + chr3L 5483065 exon CG4835 + chr3L 5483183 exon CG4835 + chr3L_5_5480001 chr3L_5480001 RAL-508 1202 chr3L 5485031 5485070 chr3L 5485131 5485172 13 100 2.5 3.0 2.8 3.4 141 chr3L 5485031 intergenic not near genes chr3L 5485102 intergenic not near genes chr3L 5485172 intergenic not near genes chr3L_13_5485001 chr3L_5485001 RAL-508 1203 chr3L 5521949 5522000 chr3L 5522206 5522257 34 254 5.0 10.0 7.5 4.0 308 chr3L 5521949 intron Lkr - chr3L 5522103 intron Lkr - chr3L 5522257 intron Lkr - chr3L_34_5520001 chr3L_5520001 RAL-508 1204 chr3L 5521618 5521659 chr3L 5526194 5526240 17 4585 29.0 24.5 26.8 0.6 4622 chr3L 5521618 intron Lkr - chr3L 5523929 intron Lkr - chr3L 5526240 intron Lkr - chr3L_17_5520001 chr3L_5520001 RAL-508 1205 chr3L 5537704 5537751 chr3L 5538066 5538088 jockey 7 358 3.5 6.0 4.8 1.2 384 chr3L 5537704 intergenic not near genes chr3L 5537896 intergenic not near genes chr3L 5538088 intergenic CG10625 - chr3L_7_5535001 chr3L_5535001 RAL-508 1206 chr3L 5614019 5614068 chr3L 5614121 5614166 17 100 3.0 2.0 2.5 4.9 147 chr3L 5614019 intergenic not near genes chr3L 5614092 intergenic not near genes chr3L 5614166 intergenic not near genes chr3L_17_5610001 chr3L_5610001 RAL-508 1207 chr3L 5847675 5847716 chr3L 5847864 5847896 9 184 3.0 3.0 3.0 2.2 221 chr3L 5847675 intergenic not near genes chr3L 5847786 intergenic not near genes chr3L 5847896 intergenic not near genes chr3L_9_5845001 chr3L_5845001 RAL-508 1208 chr3L 5908066 5908099 chr3L 5908166 5908198 4 100 0.0 5.0 2.5 1.1 132 chr3L 5908066 intron CG13288 + chr3L 5908132 intron CG13288 + chr3L 5908198 intron CG13288 + chr3L_4_5905001 chr3L_5905001 RAL-508 1209 chr3L 5926321 5926351 chr3L 5926504 5926518 BS 6 194 5.0 5.0 5.0 1.0 197 chr3L 5926321 intron Vap-33B + chr3L 5926420 intron Vap-33B + chr3L 5926518 intron Vap-33B + chr3L_6_5925001 chr3L_5925001 RAL-508 1210 chr3L 5983812 5983859 chr3L 5983953 5984000 12 135 2.0 0.5 1.2 5.5 188 chr3L 5983812 3` UTR CR45439 - chr3L 5983906 intergenic CR45439 -,CR45440 - chr3L 5984000 intergenic CR45440 -,CR45439 - chr3L_12_5980001 chr3L_5980001 RAL-508 1211 chr3L 6040346 6040389 chr3L 6042722 6042746 Doc 10 2372 4.0 5.5 4.8 1.7 2400 chr3L 6040346 intergenic Jon65Aiv + chr3L 6041546 intergenic not near genes chr3L 6042746 intergenic not near genes chr3L_10_6040001 chr3L_6040001 RAL-508 1212 chr3L 6052636 6052652 chr3L 6052732 6052757 6 102 7.5 5.5 6.5 0.8 121 chr3L 6052636 exon Jon65Aii + chr3L 6052696 intron Jon65Aii + chr3L 6052757 exon Jon65Aii + chr3L_6_6050001 chr3L_6050001 RAL-508 1213 chr3L 6063302 6063346 chr3L 6063447 6063484 9 145 0.0 4.0 2.0 3.0 182 chr3L 6063302 intergenic CG10472 - chr3L 6063393 intergenic CG10472 - chr3L 6063484 intergenic not near genes chr3L_9_6060001 chr3L_6060001 RAL-508 1214 chr3L 6102934 6102964 chr3L 6103037 6103066 4 103 3.5 0.5 2.0 1.3 132 chr3L 6102934 intron Ets65A + chr3L 6103000 intron Ets65A + chr3L 6103066 intron Ets65A + chr3L_4_6100001 chr3L_6100001 RAL-508 1215 chr3L 6116675 6116717 chr3L 6116779 6116793 9 100 5.5 2.5 4.0 1.8 118 chr3L 6116675 intron Ets65A + chr3L 6116734 intron Ets65A + chr3L 6116793 intron Ets65A + chr3L_9_6115001 chr3L_6115001 RAL-508 1216 chr3L 6119135 6119154 chr3L 6119232 6119251 5 97 1.5 0.0 0.8 2.8 116 chr3L 6119135 exon Ets65A + chr3L 6119193 intron Ets65A + chr3L 6119251 intron Ets65A + chr3L_5_6115001 chr3L_6115001 RAL-508 1217 chr3L 6159851 6159896 chr3L 6159961 6160002 14 108 4.0 2.0 3.0 3.5 151 chr3L 6159851 intergenic not near genes chr3L 6159926 intergenic not near genes chr3L 6160002 intergenic not near genes chr3L_14_6155001 chr3L_6155001 RAL-508 1218 chr3L 6220900 6220946 chr3L 6230066 6230117 roo 17 9168 9.0 5.0 7.0 2.1 9217 chr3L 6220900 5` UTR pncr008:3L + chr3L 6225508 intergenic not near genes chr3L 6230117 intergenic not near genes chr3L_17_6225001 chr3L_6225001 RAL-508 1219 chr3L 6334989 6335037 chr3L 6335479 6335528 297 14 488 2.5 5.0 3.8 2.9 539 chr3L 6334989 intron CG13300 - chr3L 6335258 intron CG13300 - chr3L 6335528 intron CG13300 - chr3L_14_6335001 chr3L_6335001 RAL-508 1220 chr3L 6405643 6405677 chr3L 6432125 6432161 roo 9 26484 5.0 2.5 3.8 1.9 26518 chr3L 6405643 intron CG42747 + chr3L 6418902 intron CG42747 + chr3L 6432161 intron CG42747 + chr3L_9_6415001 chr3L_6415001 RAL-508 1221 chr3L 6530269 6530303 chr3L 6530369 6530394 8 99 2.0 3.0 2.5 2.3 125 chr3L 6530269 intron sfl + chr3L 6530332 intron sfl + chr3L 6530394 intron sfl + chr3L_8_6530001 chr3L_6530001 RAL-508 1222 chr3L 6540248 6540297 chr3L 6540354 6540403 11 104 3.5 2.0 2.8 2.9 155 chr3L 6540248 intron sfl + chr3L 6540326 intron sfl + chr3L 6540403 intron sfl + chr3L_11_6540001 chr3L_6540001 RAL-508 1223 chr3L 6610201 6610214 chr3L 6610307 6610339 5 120 8.0 9.5 8.8 0.5 138 chr3L 6610201 intron CG8398 + chr3L 6610270 intron CG8398 + chr3L 6610339 intron CG8398 + chr3L_5_6610001 chr3L_6610001 RAL-508 1224 chr3L 6652063 6652101 chr3L 6652158 6652198 21 97 5.5 4.5 5.0 3.5 135 chr3L 6652063 intergenic not near genes chr3L 6652130 intergenic not near genes chr3L 6652198 intergenic not near genes chr3L_21_6650001 chr3L_6650001 RAL-508 1225 chr3L 6781102 6781141 chr3L 6783135 6783174 Doc 7 2033 2.0 3.0 2.5 2.0 2072 chr3L 6781102 intergenic not near genes chr3L 6782138 intergenic not near genes chr3L 6783174 intergenic not near genes chr3L_7_6780001 chr3L_6780001 RAL-508 1226 chr3L 6788930 6788960 chr3L 6789029 6789059 6 98 1.5 3.5 2.5 1.7 129 chr3L 6788930 intergenic not near genes chr3L 6788994 intergenic not near genes chr3L 6789059 intergenic not near genes chr3L_6_6785001 chr3L_6785001 RAL-508 1227 chr3L 6835910 6835922 chr3L 6836008 6836020 6 98 6.0 2.0 4.0 1.2 110 chr3L 6835910 intergenic not near genes chr3L 6835965 intergenic not near genes chr3L 6836020 intergenic not near genes chr3L_6_6835001 chr3L_6835001 RAL-508 1228 chr3L 6855912 6855955 chr3L 6860715 6860758 Doc 11 4803 3.0 1.5 2.2 3.4 4846 chr3L 6855912 intergenic not near genes chr3L 6858335 intergenic not near genes chr3L 6860758 intergenic not near genes chr3L_11_6855001 chr3L_6855001 RAL-508 1229 chr3L 6868708 6868737 chr3L 6868803 6868835 4 97 0.0 6.0 3.0 1.0 127 chr3L 6868708 intergenic not near genes chr3L 6868772 intergenic not near genes chr3L 6868835 intergenic not near genes chr3L_4_6865001 chr3L_6865001 RAL-508 1230 chr3L 6887498 6887529 chr3L 6895010 6895040 roo 8 7512 6.5 2.5 4.5 1.5 7542 chr3L 6887498 intergenic not near genes chr3L 6891269 intergenic not near genes chr3L 6895040 intergenic not near genes chr3L_8_6890001 chr3L_6890001 RAL-508 1231 chr3L 6907993 6908044 chr3L 6908098 6908140 7 102 6.0 0.0 3.0 1.8 147 chr3L 6907993 intergenic not near genes chr3L 6908066 intergenic not near genes chr3L 6908140 intergenic not near genes chr3L_7_6905001 chr3L_6905001 RAL-508 1232 chr3L 6934316 6934361 chr3L 6934446 6934492 7 130 3.5 3.5 3.5 1.6 176 chr3L 6934316 exon CG14820 + chr3L 6934404 intron CG14820 + chr3L 6934492 exon CG14820 + chr3L_7_6930001 chr3L_6930001 RAL-508 1233 chr3L 6942059 6942078 chr3L 6942178 6942197 5 119 5.5 9.5 7.5 0.6 138 chr3L 6942059 intergenic not near genes chr3L 6942128 intergenic not near genes chr3L 6942197 intergenic not near genes chr3L_5_6940001 chr3L_6940001 RAL-508 1234 chr3L 6990703 6990751 chr3L 6990799 6990815 17 95 3.0 3.0 3.0 4.2 112 chr3L 6990703 5` UTR bin + chr3L 6990759 5` UTR bin + chr3L 6990815 5` UTR bin + chr3L_17_6990001 chr3L_6990001 RAL-508 1235 chr3L 6994894 6994913 chr3L 6995524 6995543 BS 4 630 0.0 0.5 0.2 3.3 649 chr3L 6994894 intergenic bin + chr3L 6995218 intergenic not near genes chr3L 6995543 intergenic not near genes chr3L_4_6995001 chr3L_6995001 RAL-508 1236 chr3L 7035985 7036021 chr3L 7036081 7036123 4 99 0.0 0.0 0.0 4.0 138 chr3L 7035985 intron Mp + chr3L 7036054 intron Mp + chr3L 7036123 intron Mp + chr3L_4_7035001 chr3L_7035001 RAL-508 1237 chr3L 7244917 7244964 chr3L 7245028 7245055 11 101 4.5 3.0 3.8 2.3 138 chr3L 7244917 exon mei-P22 + chr3L 7244986 exon mei-P22 + chr3L 7245055 exon mei-P22 + chr3L_11_7240001 chr3L_7240001 RAL-508 1238 chr3L 7285453 7285476 chr3L 7285529 7285574 10 93 4.5 2.5 3.5 2.2 121 chr3L 7285453 intron unc-13-4A - chr3L 7285514 intron unc-13-4A - chr3L 7285574 intron unc-13-4A - chr3L_10_7285001 chr3L_7285001 RAL-508 1239 chr3L 7288381 7288411 chr3L 7288486 7288514 9 102 0.0 7.0 3.5 2.0 133 chr3L 7288381 intron unc-13-4A - chr3L 7288448 intron unc-13-4A - chr3L 7288514 intron unc-13-4A - chr3L_9_7285001 chr3L_7285001 RAL-508 1240 chr3L 7308171 7308219 chr3L 7308267 7308315 8 96 1.5 5.5 3.5 1.8 144 chr3L 7308171 intron unc-13-4A - chr3L 7308243 intron unc-13-4A - chr3L 7308315 intron unc-13-4A - chr3L_8_7305001 chr3L_7305001 RAL-508 1241 chr3L 7311574 7311617 chr3L 7311678 7311728 14 110 7.0 2.5 4.8 2.4 154 chr3L 7311574 intron unc-13-4A - chr3L 7311651 intron unc-13-4A - chr3L 7311728 intron unc-13-4A - chr3L_14_7310001 chr3L_7310001 RAL-508 1242 chr3L 7377295 7377346 chr3L 7380420 7380468 297 7 3125 1.5 3.0 2.2 2.2 3173 chr3L 7377295 intron SMSr - chr3L 7378882 intron SMSr - chr3L 7380468 intron SMSr - chr3L_7_7375001 chr3L_7375001 RAL-508 1243 chr3L 7445355 7445391 chr3L 7445437 7445454 5 77 6.0 3.5 4.8 0.9 99 chr3L 7445355 5` UTR CG42458 + chr3L 7445404 5` UTR CG42458 + chr3L 7445454 5` UTR CG42458 + chr3L_5_7445001 chr3L_7445001 RAL-508 1244 chr3L 7449438 7449454 chr3L 7449538 7449551 5 99 0.0 6.5 3.2 1.2 113 chr3L 7449438 intron CG42458 + chr3L 7449494 intron CG42458 + chr3L 7449551 intron CG42458 + chr3L_5_7445001 chr3L_7445001 RAL-508 1245 chr3L 7461655 7461693 chr3L 7461758 7461814 9 115 4.0 0.0 2.0 3.0 159 chr3L 7461655 intergenic not near genes chr3L 7461734 intergenic not near genes chr3L 7461814 intergenic not near genes chr3L_9_7460001 chr3L_7460001 RAL-508 1246 chr3L 7462927 7462940 chr3L 7463055 7463066 4 128 0.5 3.5 2.0 1.3 139 chr3L 7462927 intergenic not near genes chr3L 7462996 intergenic not near genes chr3L 7463066 intergenic not near genes chr3L_4_7460001 chr3L_7460001 RAL-508 1247 chr3L 7480032 7480072 chr3L 7480141 7480181 12 108 2.5 2.5 2.5 3.4 149 chr3L 7480032 intergenic not near genes chr3L 7480106 intergenic not near genes chr3L 7480181 intergenic not near genes chr3L_12_7480001 chr3L_7480001 RAL-508 1248 chr3L 7498742 7498780 chr3L 7503539 7503571 F-element 11 4795 4.0 2.5 3.2 2.6 4829 chr3L 7498742 5` UTR CG8539 - chr3L 7501156 intergenic not near genes chr3L 7503571 intergenic not near genes chr3L_11_7500001 chr3L_7500001 RAL-508 1249 chr3L 7505422 7505432 chr3L 7505518 7505528 5 96 0.5 5.5 3.0 1.2 106 chr3L 7505422 intergenic CG7548 - chr3L 7505475 intergenic CG7548 - chr3L 7505528 intergenic CG7548 - chr3L_5_7505001 chr3L_7505001 RAL-508 1250 chr3L 7572042 7572072 chr3L 7572144 7572184 7 107 2.0 1.5 1.8 2.5 142 chr3L 7572042 intergenic not near genes chr3L 7572113 intergenic not near genes chr3L 7572184 intergenic not near genes chr3L_7_7570001 chr3L_7570001 RAL-508 1251 chr3L 7650522 7650562 chr3L 7650701 7650738 14 177 4.5 0.0 2.2 4.4 216 chr3L 7650522 intergenic CG32373 + chr3L 7650630 5` UTR CG32373 + chr3L 7650738 5` UTR CG32373 + chr3L_14_7650001 chr3L_7650001 RAL-508 1252 chr3L 7711974 7712005 chr3L 7712086 7712116 4 112 3.0 0.0 1.5 1.6 142 chr3L 7711974 intron,intron CG32373 +,Ank2 - chr3L 7712045 intron,intron CG32373 +,Ank2 - chr3L 7712116 intron,intron CG32373 +,Ank2 - chr3L_4_7710001 chr3L_7710001 RAL-508 1253 chr3L 7792656 7792674 chr3L 7792777 7792824 5 140 4.5 7.0 5.8 0.7 168 chr3L 7792656 intron CG32369 - chr3L 7792740 intron CG32369 - chr3L 7792824 intron CG32369 - chr3L_5_7790001 chr3L_7790001 RAL-508 1254 chr3L 7793697 7793736 chr3L 7800769 7800808 297 12 7072 5.5 3.5 4.5 2.2 7111 chr3L 7793697 intron CG32369 - chr3L 7797252 intron CG32369 - chr3L 7800808 intron CG32369 - chr3L_12_7795001 chr3L_7795001 RAL-508 1255 chr3L 7814686 7814727 chr3L 7814790 7814831 15 104 3.0 3.0 3.0 3.8 145 chr3L 7814686 3` UTR Pdp1 - chr3L 7814758 3` UTR Pdp1 - chr3L 7814831 3` UTR Pdp1 - chr3L_15_7810001 chr3L_7810001 RAL-508 1256 chr3L 7869649 7869662 chr3L 7869745 7869756 4 95 9.0 3.5 6.2 0.6 107 chr3L 7869649 exon CG32365 + chr3L 7869702 exon CG32365 + chr3L 7869756 exon CG32365 + chr3L_4_7865001 chr3L_7865001 RAL-508 1257 chr3L 7886517 7886547 chr3L 7889036 7889085 Stalker4 15 2535 0.5 2.0 1.2 6.8 2568 chr3L 7886517 intron CG32365 + chr3L 7887801 intron CG32365 + chr3L 7889085 intron CG32365 + chr3L_15_7885001 chr3L_7885001 RAL-508 1258 chr3L 7916816 7916854 chr3L 7926007 7926045 roo 10 9189 3.5 4.5 4.0 2.0 9229 chr3L 7916816 3` UTR syd - chr3L 7921430 intron syd - chr3L 7926045 3` UTR syd - chr3L_10_7920001 chr3L_7920001 RAL-508 1259 chr3L 7985354 7985392 chr3L 7987695 7987733 NOF 11 2344 3.0 8.5 5.8 1.6 2379 chr3L 7985354 intron nmo + chr3L 7986544 intron nmo + chr3L 7987733 intron nmo + chr3L_11_7985001 chr3L_7985001 RAL-508 1260 chr3L 8019684 8019732 chr3L 8024118 8024163 NOF 4 4430 3.0 3.0 3.0 1.0 4479 chr3L 8019684 intron nmo + chr3L 8021924 intron nmo + chr3L 8024163 intron nmo + chr3L_4_8020001 chr3L_8020001 RAL-508 1261 chr3L 8057175 8057219 chr3L 8057283 8057317 15 105 4.5 1.0 2.8 3.9 142 chr3L 8057175 intron bip1 - chr3L 8057246 intron bip1 - chr3L 8057317 intron bip1 - chr3L_15_8055001 chr3L_8055001 RAL-508 1262 chr3L 8062836 8062857 chr3L 8062934 8062956 5 98 4.0 4.5 4.2 1.0 120 chr3L 8062836 intergenic not near genes chr3L 8062896 intergenic not near genes chr3L 8062956 intergenic not near genes chr3L_5_8060001 chr3L_8060001 RAL-508 1263 chr3L 8064578 8064596 chr3L 8064812 8064830 4 234 7.0 0.0 3.5 0.9 252 chr3L 8064578 intron Ect4 + chr3L 8064704 intron Ect4 + chr3L 8064830 intron Ect4 + chr3L_4_8060001 chr3L_8060001 RAL-508 1264 chr3L 8149748 8149775 chr3L 8149874 8149897 5 125 2.5 5.0 3.8 1.0 149 chr3L 8149748 intron CG13676 - chr3L 8149822 intron CG13676 - chr3L 8149897 intron CG13676 - chr3L_5_8145001 chr3L_8145001 RAL-508 1265 chr3L 8166100 8166139 chr3L 8166338 8166377 7 236 1.0 2.0 1.5 2.8 277 chr3L 8166100 intergenic not near genes chr3L 8166238 intergenic not near genes chr3L 8166377 intergenic not near genes chr3L_7_8165001 chr3L_8165001 RAL-508 1266 chr3L 8210788 8210808 chr3L 8210923 8210943 9 134 2.0 6.0 4.0 1.8 155 chr3L 8210788 intergenic CG32364 - chr3L 8210866 intergenic CG32364 - chr3L 8210943 intergenic CG32364 - chr3L_9_8210001 chr3L_8210001 RAL-508 1267 chr3L 8214721 8214752 chr3L 8214827 8214858 5 105 2.5 6.5 4.5 0.9 137 chr3L 8214721 intergenic not near genes chr3L 8214790 intergenic CG8012 + chr3L 8214858 intergenic CG8012 + chr3L_5_8210001 chr3L_8210001 RAL-508 1268 chr3L 8226694 8226721 chr3L 8226813 8226836 4 118 1.5 0.0 0.8 2.2 142 chr3L 8226694 intergenic not near genes chr3L 8226765 intergenic not near genes chr3L 8226836 intergenic not near genes chr3L_4_8225001 chr3L_8225001 RAL-508 1269 chr3L 8233574 8233593 chr3L 8238854 8238857 Rt1a 4 5276 2.0 11.5 6.8 0.5 5283 chr3L 8233574 intron CG7213 - chr3L 8236216 intron CG7213 - chr3L 8238857 intron,intron CG7213 -,Dscam4 + chr3L_4_8235001 chr3L_8235001 RAL-508 1270 chr3L 8243797 8243846 chr3L 8243900 8243947 13 101 3.5 7.0 5.2 2.1 150 chr3L 8243797 intron Dscam4 + chr3L 8243872 intron Dscam4 + chr3L 8243947 intron Dscam4 + chr3L_13_8240001 chr3L_8240001 RAL-508 1271 chr3L 8273036 8273087 chr3L 8273155 8273201 6 116 4.0 3.5 3.8 1.2 165 chr3L 8273036 intron Dscam4 + chr3L 8273118 intron Dscam4 + chr3L 8273201 exon Dscam4 + chr3L_6_8270001 chr3L_8270001 RAL-508 1272 chr3L 8274820 8274839 chr3L 8274952 8274964 4 130 5.0 0.0 2.5 1.1 144 chr3L 8274820 intron Dscam4 + chr3L 8274892 intron Dscam4 + chr3L 8274964 intron Dscam4 + chr3L_4_8270001 chr3L_8270001 RAL-508 1273 chr3L 8284852 8284885 chr3L 8284946 8284982 9 96 2.0 3.0 2.5 2.6 130 chr3L 8284852 intron cert - chr3L 8284917 intron cert - chr3L 8284982 intron cert - chr3L_9_8280001 chr3L_8280001 RAL-508 1274 chr3L 8364520 8364535 chr3L 8364631 8364646 5 111 3.0 1.0 2.0 1.7 126 chr3L 8364520 intergenic not near genes chr3L 8364583 intergenic not near genes chr3L 8364646 intergenic not near genes chr3L_5_8360001 chr3L_8360001 RAL-508 1275 chr3L 8371732 8371741 chr3L 8371838 8371847 4 106 0.0 4.0 2.0 1.3 115 chr3L 8371732 intergenic not near genes chr3L 8371790 intergenic not near genes chr3L 8371847 intergenic not near genes chr3L_4_8370001 chr3L_8370001 RAL-508 1276 chr3L 8375744 8375781 chr3L 8375902 8375930 8 157 3.0 1.5 2.2 2.5 186 chr3L 8375744 intron ImpE1 + chr3L 8375837 intron ImpE1 + chr3L 8375930 intron ImpE1 + chr3L_8_8375001 chr3L_8375001 RAL-508 1277 chr3L 8442919 8442929 chr3L 8443020 8443030 4 100 0.0 3.5 1.8 1.4 111 chr3L 8442919 intergenic CG6983 - chr3L 8442974 intergenic CG6983 - chr3L 8443030 intergenic CG6983 - chr3L_4_8440001 chr3L_8440001 RAL-508 1278 chr3L 8498306 8498323 chr3L 8505780 8505808 blood 5 7484 3.0 6.5 4.8 0.9 7502 chr3L 8498306 intron CG43163 - chr3L 8502057 intron CG43163 - chr3L 8505808 intron CG43163 - chr3L_5_8500001 chr3L_8500001 RAL-508 1279 chr3L 8643554 8643600 chr3L 8643650 8643694 10 96 5.5 1.0 3.2 2.4 140 chr3L 8643554 3` UTR Cpr66D + chr3L 8643624 intergenic Cpr66D + chr3L 8643694 intergenic Cpr66D + chr3L_10_8640001 chr3L_8640001 RAL-508 1280 chr3L 8688267 8688274 chr3L 8688367 8688378 5 103 0.0 9.5 4.8 0.9 111 chr3L 8688267 intergenic not near genes chr3L 8688322 intergenic not near genes chr3L 8688378 intergenic not near genes chr3L_5_8685001 chr3L_8685001 RAL-508 1281 chr3L 8707890 8707905 chr3L 8707991 8708011 5 103 0.5 3.0 1.8 1.8 121 chr3L 8707890 intergenic not near genes chr3L 8707950 intergenic not near genes chr3L 8708011 intergenic not near genes chr3L_5_8705001 chr3L_8705001 RAL-508 1282 chr3L 8791257 8791271 chr3L 8796697 8796711 I-element 6 5440 9.5 0.0 4.8 1.0 5454 chr3L 8791257 exon Fhos + chr3L 8793984 intron Fhos + chr3L 8796711 intron Fhos + chr3L_6_8790001 chr3L_8790001 RAL-508 1283 chr3L 8849195 8849203 chr3L 8849295 8849303 5 99 13.5 4.0 8.8 0.5 108 chr3L 8849195 intron dally + chr3L 8849249 intron dally + chr3L 8849303 intron dally + chr3L_5_8845001 chr3L_8845001 RAL-508 1284 chr3L 8849205 8849239 chr3L 8849292 8849316 10 92 7.0 3.0 5.0 1.7 111 chr3L 8849205 intron dally + chr3L 8849260 intron dally + chr3L 8849316 intron dally + chr3L_10_8845001 chr3L_8845001 RAL-508 1285 chr3L 8884392 8884418 chr3L 8884610 8884637 4 218 2.5 0.0 1.2 1.8 245 chr3L 8884392 intron dally + chr3L 8884514 intron dally + chr3L 8884637 intron dally + chr3L_4_8880001 chr3L_8880001 RAL-508 1286 chr3L 9008636 9008674 chr3L 9008739 9008777 5 103 5.0 7.5 6.2 0.7 141 chr3L 9008636 3` UTR CG5194 - chr3L 9008706 3` UTR CG5194 - chr3L 9008777 exon CG5194 - chr3L_5_9005001 chr3L_9005001 RAL-508 1287 chr3L 9010632 9010683 chr3L 9010728 9010763 13 86 3.5 1.0 2.2 4.1 131 chr3L 9010632 intergenic not near genes chr3L 9010698 intergenic not near genes chr3L 9010763 intergenic not near genes chr3L_13_9010001 chr3L_9010001 RAL-508 1288 chr3L 9024488 9024535 chr3L 9024588 9024633 18 100 1.0 4.5 2.8 4.7 145 chr3L 9024488 intergenic not near genes chr3L 9024560 intergenic not near genes chr3L 9024633 intergenic not near genes chr3L_18_9020001 chr3L_9020001 RAL-508 1289 chr3L 9030411 9030447 chr3L 9030510 9030546 7 99 3.0 1.5 2.2 2.2 135 chr3L 9030411 intergenic not near genes chr3L 9030478 intergenic not near genes chr3L 9030546 intergenic not near genes chr3L_7_9030001 chr3L_9030001 RAL-508 1290 chr3L 9076907 9076955 chr3L 9084487 9084525 412 13 7578 4.0 5.0 4.5 2.4 7618 chr3L 9076907 exon Tequila + chr3L 9080716 intron Tequila + chr3L 9084525 exon Tequila + chr3L_13_9080001 chr3L_9080001 RAL-508 1291 chr3L 9109740 9109777 chr3L 9110365 9110402 7 625 2.5 6.0 4.2 1.3 662 chr3L 9109740 intron bol - chr3L 9110071 intron bol - chr3L 9110402 intron bol - chr3L_7_9110001 chr3L_9110001 RAL-508 1292 chr3L 9128186 9128198 chr3L 9128291 9128303 4 105 9.5 6.0 7.8 0.5 117 chr3L 9128186 intron bol - chr3L 9128244 intron bol - chr3L 9128303 intron bol - chr3L_4_9125001 chr3L_9125001 RAL-508 1293 chr3L 9128199 9128220 chr3L 9128286 9128324 9 103 5.0 4.0 4.5 1.6 125 chr3L 9128199 intron bol - chr3L 9128262 intron bol - chr3L 9128324 intron bol - chr3L_9_9125001 chr3L_9125001 RAL-508 1294 chr3L 9130538 9130581 chr3L 9134319 9134339 412 12 3771 5.5 1.5 3.5 2.7 3801 chr3L 9130538 intergenic bol - chr3L 9132438 intergenic not near genes chr3L 9134339 intergenic Dhpr + chr3L_12_9130001 chr3L_9130001 RAL-508 1295 chr3L 9164680 9164695 chr3L 9166167 9166182 hobo 6 1487 11.0 0.5 5.8 0.9 1502 chr3L 9164680 intron Rdl - chr3L 9165431 intron Rdl - chr3L 9166182 intron Rdl - chr3L_6_9165001 chr3L_9165001 RAL-508 1296 chr3L 9164697 9164703 chr3L 9166163 9166190 hobo 7 1483 9.0 0.5 4.8 1.2 1493 chr3L 9164697 intron Rdl - chr3L 9165444 intron Rdl - chr3L 9166190 intron Rdl - chr3L_7_9165001 chr3L_9165001 RAL-508 1297 chr3L 9164706 9164717 chr3L 9166160 9166199 hobo 6 1480 6.5 0.5 3.5 1.3 1493 chr3L 9164706 intron Rdl - chr3L 9165452 intron Rdl - chr3L 9166199 intron Rdl - chr3L_6_9165001 chr3L_9165001 RAL-508 1298 chr3L 9219226 9219255 chr3L 9219918 9219946 jockey 9 689 8.0 6.5 7.2 1.1 720 chr3L 9219226 intergenic not near genes chr3L 9219586 intergenic not near genes chr3L 9219946 intergenic not near genes chr3L_9_9215001 chr3L_9215001 RAL-508 1299 chr3L 9219256 9219275 chr3L 9219917 9219935 jockey 6 670 5.0 6.0 5.5 0.9 679 chr3L 9219256 intergenic not near genes chr3L 9219596 intergenic not near genes chr3L 9219935 intergenic not near genes chr3L_6_9215001 chr3L_9215001 RAL-508 1300 chr3L 9242121 9242163 chr3L 9242230 9242272 18 108 0.0 0.0 0.0 18.0 151 chr3L 9242121 intergenic not near genes chr3L 9242196 intergenic not near genes chr3L 9242272 intergenic not near genes chr3L_18_9240001 chr3L_9240001 RAL-508 1301 chr3L 9270610 9270651 chr3L 9278381 9278422 roo 10 7767 2.5 5.0 3.8 2.1 7812 chr3L 9270610 intron GluRIB + chr3L 9274516 intron GluRIB + chr3L 9278422 exon GluRIB + chr3L_10_9270001 chr3L_9270001 RAL-508 1302 chr3L 9307796 9307796 chr3L 22908066 22908067 4 13600270 26.0 26.0 26.0 0.1 13600271 chr3L 9307796 intergenic not near genes chr3L 16107932 intron Zn72D - chr3L 22908067 intergenic not near genes chr3L_4_16105001 chr3L_16105001 RAL-508 1303 chr3L 9443499 9443544 chr3L 9445306 9445351 S-element 12 1806 3.0 5.0 4.0 2.4 1852 chr3L 9443499 intron CG33926 + chr3L 9444425 intron CG33926 + chr3L 9445351 intron CG33926 + chr3L_12_9440001 chr3L_9440001 RAL-508 1304 chr3L 9502590 9502619 chr3L 9502695 9502724 12 104 7.5 3.0 5.2 1.9 134 chr3L 9502590 intron path - chr3L 9502657 intron path - chr3L 9502724 intron path - chr3L_12_9500001 chr3L_9500001 RAL-508 1305 chr3L 9510907 9510951 chr3L 9511020 9511047 8 100 0.0 3.5 1.8 2.9 140 chr3L 9510907 intron RpS9 - chr3L 9510977 intron RpS9 - chr3L 9511047 intron RpS9 - chr3L_8_9510001 chr3L_9510001 RAL-508 1306 chr3L 9524011 9524067 chr3L 9524111 9524167 15 96 2.0 7.0 4.5 2.7 156 chr3L 9524011 intron CG33700 - chr3L 9524089 intron CG33700 - chr3L 9524167 intron CG33700 - chr3L_15_9520001 chr3L_9520001 RAL-508 1307 chr3L 9533753 9533785 chr3L 9541325 9541356 412 6 7570 3.5 9.0 6.2 0.8 7603 chr3L 9533753 intergenic not near genes chr3L 9537554 intergenic not near genes chr3L 9541356 intergenic not near genes chr3L_6_9535001 chr3L_9535001 RAL-508 1308 chr3L 9575902 9575919 chr3L 9580985 9580994 jockey 4 5087 7.0 5.5 6.2 0.6 5092 chr3L 9575902 intron CG42673 + chr3L 9578448 intron CG42673 + chr3L 9580994 intron CG42673 + chr3L_4_9575001 chr3L_9575001 RAL-508 1309 chr3L 9575928 9575943 chr3L 9580984 9581033 jockey 5 5083 5.5 5.0 5.2 0.8 5105 chr3L 9575928 intron CG42673 + chr3L 9578480 intron CG42673 + chr3L 9581033 intron CG42673 + chr3L_5_9575001 chr3L_9575001 RAL-508 1310 chr3L 9637841 9637882 chr3L 9637939 9637983 10 101 5.0 3.0 4.0 2.0 142 chr3L 9637841 intron fry - chr3L 9637912 intron fry - chr3L 9637983 intron fry - chr3L_10_9635001 chr3L_9635001 RAL-508 1311 chr3L 9639009 9639061 chr3L 9639114 9639166 12 105 0.0 4.5 2.2 3.8 157 chr3L 9639009 intron,3` UTR fry -,CG8329 + chr3L 9639088 intron fry - chr3L 9639166 intron fry - chr3L_12_9635001 chr3L_9635001 RAL-508 1312 chr3L 9665827 9665857 chr3L 9666063 9666093 7 235 2.0 3.5 2.8 1.8 266 chr3L 9665827 intron fry - chr3L 9665960 intron fry - chr3L 9666093 intron fry - chr3L_7_9665001 chr3L_9665001 RAL-508 1313 chr3L 9697778 9697799 chr3L 9697864 9697908 9 108 4.0 4.0 4.0 1.8 130 chr3L 9697778 intergenic not near genes chr3L 9697843 intergenic UbcD4 + chr3L 9697908 intergenic UbcD4 + chr3L_9_9695001 chr3L_9695001 RAL-508 1314 chr3L 9715585 9715624 chr3L 9715678 9715721 5 95 4.5 2.5 3.5 1.1 136 chr3L 9715585 intron vsg + chr3L 9715653 intron vsg + chr3L 9715721 intron vsg + chr3L_5_9715001 chr3L_9715001 RAL-508 1315 chr3L 9871177 9871212 chr3L 9871293 9871325 6 115 1.0 2.5 1.8 2.1 148 chr3L 9871177 intergenic not near genes chr3L 9871251 intergenic not near genes chr3L 9871325 intergenic not near genes chr3L_6_9870001 chr3L_9870001 RAL-508 1316 chr3L 9924915 9924958 chr3L 9925018 9925063 11 104 4.5 1.5 3.0 2.8 148 chr3L 9924915 intron CG34356 + chr3L 9924989 intron CG34356 + chr3L 9925063 intron CG34356 + chr3L_11_9920001 chr3L_9920001 RAL-508 1317 chr3L 9929649 9929701 chr3L 9938448 9938464 roo 9 8787 4.5 7.0 5.8 1.3 8815 chr3L 9929649 intron CG34356 + chr3L 9934056 intron CG34356 + chr3L 9938464 intron CG34356 + chr3L_9_9930001 chr3L_9930001 RAL-508 1318 chr3L 9951176 9951230 chr3L 9951283 9951334 11 103 2.5 2.5 2.5 3.1 158 chr3L 9951176 intron CG34356 + chr3L 9951255 intron CG34356 + chr3L 9951334 intron CG34356 + chr3L_11_9950001 chr3L_9950001 RAL-508 1319 chr3L 10103878 10103883 chr3L 10103933 10103983 8 84 2.5 4.0 3.2 1.9 105 chr3L 10103878 intron dpr6 + chr3L 10103930 intron dpr6 + chr3L 10103983 intron dpr6 + chr3L_8_10100001 chr3L_10100001 RAL-508 1320 chr3L 10204059 10204094 chr3L 10204219 10204254 6 160 2.0 0.5 1.2 2.7 195 chr3L 10204059 intergenic not near genes chr3L 10204156 intergenic not near genes chr3L 10204254 intergenic not near genes chr3L_6_10200001 chr3L_10200001 RAL-508 1321 chr3L 10219216 10219263 chr3L 10219333 10219380 19 116 4.0 5.0 4.5 3.5 164 chr3L 10219216 exon CG32055 - chr3L 10219298 exon CG32055 - chr3L 10219380 exon CG32055 - chr3L_19_10215001 chr3L_10215001 RAL-508 1322 chr3L 10255364 10255400 chr3L 10255482 10255518 5 118 0.0 5.5 2.8 1.3 154 chr3L 10255364 intergenic not near genes chr3L 10255441 intergenic not near genes chr3L 10255518 intergenic not near genes chr3L_5_10255001 chr3L_10255001 RAL-508 1323 chr3L 10300036 10300070 chr3L 10300148 10300157 7 108 3.5 3.5 3.5 1.6 121 chr3L 10300036 intergenic not near genes chr3L 10300096 intergenic not near genes chr3L 10300157 intergenic not near genes chr3L_7_10300001 chr3L_10300001 RAL-508 1324 chr3L 10308721 10308768 chr3L 10308818 10308855 23 95 2.5 2.0 2.2 7.2 134 chr3L 10308721 intergenic not near genes chr3L 10308788 intergenic not near genes chr3L 10308855 intergenic not near genes chr3L_23_10305001 chr3L_10305001 RAL-508 1325 chr3L 10314112 10314153 chr3L 10314218 10314254 8 105 3.0 3.5 3.2 1.9 142 chr3L 10314112 intergenic not near genes chr3L 10314183 intergenic not near genes chr3L 10314254 intergenic not near genes chr3L_8_10310001 chr3L_10310001 RAL-508 1326 chr3L 10314469 10314501 chr3L 10314568 10314601 6 98 5.0 3.5 4.2 1.2 132 chr3L 10314469 intergenic not near genes chr3L 10314535 intergenic not near genes chr3L 10314601 intergenic not near genes chr3L_6_10310001 chr3L_10310001 RAL-508 1327 chr3L 10381710 10381742 chr3L 10381796 10381818 5 85 3.0 3.5 3.2 1.2 108 chr3L 10381710 intergenic not near genes chr3L 10381764 intergenic not near genes chr3L 10381818 intergenic not near genes chr3L_5_10380001 chr3L_10380001 RAL-508 1328 chr3L 10395686 10395703 chr3L 10395932 10395946 4 242 4.0 3.0 3.5 0.9 260 chr3L 10395686 intergenic not near genes chr3L 10395816 intergenic not near genes chr3L 10395946 intergenic not near genes chr3L_4_10395001 chr3L_10395001 RAL-508 1329 chr3L 10395704 10395727 chr3L 10395925 10395950 8 231 1.5 3.0 2.2 2.5 246 chr3L 10395704 intergenic not near genes chr3L 10395827 intergenic not near genes chr3L 10395950 intergenic not near genes chr3L_8_10395001 chr3L_10395001 RAL-508 1330 chr3L 10414936 10414969 chr3L 10417312 10417361 Doc 8 2386 0.5 4.5 2.5 2.3 2425 chr3L 10414936 intergenic CG12362 + chr3L 10416148 intergenic not near genes chr3L 10417361 intergenic not near genes chr3L_8_10415001 chr3L_10415001 RAL-508 1331 chr3L 10417552 10417600 chr3L 10417649 10417677 8 85 5.5 2.5 4.0 1.6 125 chr3L 10417552 intergenic not near genes chr3L 10417614 intergenic not near genes chr3L 10417677 intergenic not near genes chr3L_8_10415001 chr3L_10415001 RAL-508 1332 chr3L 10600439 10600475 chr3L 10600537 10600577 5 99 2.5 2.5 2.5 1.4 138 chr3L 10600439 intergenic not near genes chr3L 10600508 intergenic not near genes chr3L 10600577 intergenic not near genes chr3L_5_10600001 chr3L_10600001 RAL-508 1333 chr3L 10611289 10611342 chr3L 10611384 10611438 17 96 5.5 5.0 5.2 2.7 149 chr3L 10611289 intergenic not near genes chr3L 10611364 intergenic not near genes chr3L 10611438 intergenic not near genes chr3L_17_10610001 chr3L_10610001 RAL-508 1334 chr3L 10621827 10621873 chr3L 10621934 10621980 10 104 1.5 2.0 1.8 3.6 153 chr3L 10621827 intergenic not near genes chr3L 10621904 intergenic not near genes chr3L 10621980 intergenic not near genes chr3L_10_10620001 chr3L_10620001 RAL-508 1335 chr3L 10658057 10658207 chr3L 10658154 10658354 16 125 0.0 0.0 0.0 16.0 297 chr3L 10658057 intron CG32066 - chr3L 10658206 intron CG32066 - chr3L 10658354 intron CG32066 - chr3L_16_10655001 chr3L_10655001 RAL-508 1336 chr3L 10694901 10694932 chr3L 10695012 10695044 8 110 0.0 4.5 2.2 2.5 143 chr3L 10694901 intron NijA - chr3L 10694972 intron NijA - chr3L 10695044 exon NijA - chr3L_8_10690001 chr3L_10690001 RAL-508 1337 chr3L 10762824 10762855 chr3L 10762915 10762931 7 83 7.0 4.5 5.8 1.0 107 chr3L 10762824 intergenic not near genes chr3L 10762878 intergenic not near genes chr3L 10762931 intergenic not near genes chr3L_7_10760001 chr3L_10760001 RAL-508 1338 chr3L 10868796 10868823 chr3L 10868898 10868925 6 102 0.0 5.0 2.5 1.7 129 chr3L 10868796 intron tna + chr3L 10868860 intron tna + chr3L 10868925 intron tna + chr3L_6_10865001 chr3L_10865001 RAL-508 1339 chr3L 10937833 10937875 chr3L 10937930 10937972 17 97 4.5 4.0 4.2 3.3 139 chr3L 10937833 intergenic not near genes chr3L 10937902 intergenic not near genes chr3L 10937972 intergenic not near genes chr3L_17_10935001 chr3L_10935001 RAL-508 1340 chr3L 10942064 10942072 chr3L 10942144 10942167 4 88 4.5 6.5 5.5 0.6 103 chr3L 10942064 intergenic not near genes chr3L 10942116 intergenic not near genes chr3L 10942167 intergenic not near genes chr3L_4_10940001 chr3L_10940001 RAL-508 1341 chr3L 10956983 10957033 chr3L 10957079 10957129 8 94 6.5 4.0 5.2 1.3 146 chr3L 10956983 intergenic not near genes chr3L 10957056 intergenic not near genes chr3L 10957129 intergenic not near genes chr3L_8_10955001 chr3L_10955001 RAL-508 1342 chr3L 11029417 11029442 chr3L 11029548 11029573 7 131 2.5 1.0 1.8 2.5 156 chr3L 11029417 3` UTR CG32081 + chr3L 11029495 intergenic CG32081 + chr3L 11029573 intergenic CG32081 + chr3L_7_11025001 chr3L_11025001 RAL-508 1343 chr3L 11083488 11083499 chr3L 11083606 11083617 4 118 7.0 2.5 4.8 0.7 129 chr3L 11083488 intron JIL-1 - chr3L 11083552 intron JIL-1 - chr3L 11083617 intron JIL-1 - chr3L_4_11080001 chr3L_11080001 RAL-508 1344 chr3L 11085667 11085701 chr3L 11085770 11085804 9 102 2.5 4.5 3.5 2.0 137 chr3L 11085667 exon JIL-1 - chr3L 11085736 intron JIL-1 - chr3L 11085804 intron JIL-1 - chr3L_9_11085001 chr3L_11085001 RAL-508 1345 chr3L 11087023 11087084 chr3L 11088849 11088893 S-element 12 1808 0.5 3.5 2.0 4.0 1870 chr3L 11087023 intron JIL-1 - chr3L 11087958 intron JIL-1 - chr3L 11088893 intron JIL-1 - chr3L_12_11085001 chr3L_11085001 RAL-508 1346 chr3L 11090075 11090087 chr3L 11090183 11090195 5 107 3.5 4.5 4.0 1.0 120 chr3L 11090075 intron JIL-1 - chr3L 11090135 intron JIL-1 - chr3L 11090195 intron JIL-1 - chr3L_5_11090001 chr3L_11090001 RAL-508 1347 chr3L 11131794 11131801 chr3L 11132075 11132085 5 283 5.0 4.0 4.5 0.9 291 chr3L 11131794 intron CG42575 + chr3L 11131940 intron,3` UTR CG42575 +,CG32074 - chr3L 11132085 intron,exon CG42575 +,CG32074 - chr3L_5_11130001 chr3L_11130001 RAL-508 1348 chr3L 11135512 11135798 chr3L 11135761 11135902 11 170 0.0 0.0 0.0 11.0 390 chr3L 11135512 intergenic CG14143 + chr3L 11135707 intergenic CG14143 +,CG32082 + chr3L 11135902 intergenic CG32082 +,CG14143 + chr3L_11_11135001 chr3L_11135001 RAL-508 1349 chr3L 11229976 11230018 chr3L 11230088 11230135 6 111 3.5 1.0 2.2 1.9 159 chr3L 11229976 intergenic CG42671 + chr3L 11230056 intergenic CG42671 + chr3L 11230135 intergenic CG42671 + chr3L_6_11230001 chr3L_11230001 RAL-508 1350 chr3L 11241760 11241787 chr3L 11241862 11241889 5 102 2.5 2.0 2.2 1.6 129 chr3L 11241760 intergenic not near genes chr3L 11241824 intergenic not near genes chr3L 11241889 intergenic not near genes chr3L_5_11240001 chr3L_11240001 RAL-508 1351 chr3L 11249840 11249887 chr3L 11249943 11249980 7 101 4.0 4.0 4.0 1.4 140 chr3L 11249840 5` UTR CR44717 + chr3L 11249910 5` UTR CR44717 + chr3L 11249980 5` UTR CR44717 + chr3L_7_11245001 chr3L_11245001 RAL-508 1352 chr3L 11264458 11264492 chr3L 11271430 11271459 17.6 6 6967 3.0 3.5 3.2 1.4 7001 chr3L 11264458 intergenic not near genes chr3L 11267958 intergenic not near genes chr3L 11271459 intergenic not near genes chr3L_6_11265001 chr3L_11265001 RAL-508 1353 chr3L 11277464 11277471 chr3L 11278453 11278473 Rt1a 4 998 1.5 2.0 1.8 1.4 1009 chr3L 11277464 intergenic not near genes chr3L 11277968 intergenic not near genes chr3L 11278473 intergenic not near genes chr3L_4_11275001 chr3L_11275001 RAL-508 1354 chr3L 11303031 11303041 chr3L 11303137 11303147 5 106 3.5 0.0 1.8 1.8 116 chr3L 11303031 intergenic not near genes chr3L 11303089 intergenic not near genes chr3L 11303147 intergenic not near genes chr3L_5_11300001 chr3L_11300001 RAL-508 1355 chr3L 11329689 11329722 chr3L 11332895 11332938 jockey 5 3209 8.0 7.5 7.8 0.6 3249 chr3L 11329689 intergenic not near genes chr3L 11331314 intergenic not near genes chr3L 11332938 intergenic not near genes chr3L_5_11330001 chr3L_11330001 RAL-508 1356 chr3L 11404800 11404846 chr3L 11404935 11404981 14 134 3.0 0.5 1.8 5.0 181 chr3L 11404800 intergenic not near genes chr3L 11404890 intergenic not near genes chr3L 11404981 intergenic not near genes chr3L_14_11400001 chr3L_11400001 RAL-508 1357 chr3L 11474611 11474658 chr3L 11474720 11474767 6 109 3.5 0.5 2.0 2.0 156 chr3L 11474611 intergenic Vha16-2 + chr3L 11474689 intergenic Vha16-2 + chr3L 11474767 intergenic Vha16-2 + chr3L_6_11470001 chr3L_11470001 RAL-508 1358 chr3L 11475612 11475643 chr3L 11475720 11475750 9 108 0.0 2.5 1.2 4.1 138 chr3L 11475612 intergenic Vha16-2 + chr3L 11475681 intergenic Vha16-2 + chr3L 11475750 intergenic Vha16-2 + chr3L_9_11475001 chr3L_11475001 RAL-508 1359 chr3L 11493144 11493187 chr3L 11493246 11493287 7 101 0.0 1.0 0.5 4.7 143 chr3L 11493144 intron chrb + chr3L 11493216 intron chrb + chr3L 11493287 intron chrb + chr3L_7_11490001 chr3L_11490001 RAL-508 1360 chr3L 11564799 11564810 chr3L 11572405 11572443 412 4 7617 4.5 3.0 3.8 0.8 7644 chr3L 11564799 exon CG33267 + chr3L 11568621 intron CG33267 + chr3L 11572443 exon CG33267 + chr3L_4_11565001 chr3L_11565001 RAL-508 1361 chr3L 11579540 11579583 chr3L 11579663 11579709 8 126 3.0 2.0 2.5 2.3 169 chr3L 11579540 intergenic CG43390 - chr3L 11579624 intergenic CG43390 - chr3L 11579709 intergenic CG43390 - chr3L_8_11575001 chr3L_11575001 RAL-508 1362 chr3L 11587900 11587948 chr3L 11587996 11588044 6 95 3.0 2.5 2.8 1.6 144 chr3L 11587900 intergenic rt - chr3L 11587972 intergenic rt - chr3L 11588044 intergenic rt - chr3L_6_11585001 chr3L_11585001 RAL-508 1363 chr3L 11590743 11590778 chr3L 11590845 11590880 9 100 1.5 4.5 3.0 2.2 137 chr3L 11590743 intergenic CG33268 - chr3L 11590812 intergenic CG33268 - chr3L 11590880 3` UTR CG33268 - chr3L_9_11590001 chr3L_11590001 RAL-508 1364 chr3L 11648494 11648508 chr3L 11648597 11648611 7 103 12.0 0.0 6.0 1.0 117 chr3L 11648494 intergenic RIOK1 -,CG7339 + chr3L 11648552 intergenic RIOK1 -,CG7339 + chr3L 11648611 intergenic RIOK1 -,CG7339 + chr3L_7_11645001 chr3L_11645001 RAL-508 1365 chr3L 11659409 11659453 chr3L 11659754 11659798 12 337 4.0 4.5 4.2 2.3 389 chr3L 11659409 intron CG32085 - chr3L 11659604 intron CG32085 - chr3L 11659798 intron CG32085 - chr3L_12_11655001 chr3L_11655001 RAL-508 1366 chr3L 11678079 11678125 chr3L 11678185 11678231 11 106 0.0 1.5 0.8 6.1 152 chr3L 11678079 intron CG32085 - chr3L 11678155 intron CG32085 - chr3L 11678231 intron CG32085 - chr3L_11_11675001 chr3L_11675001 RAL-508 1367 chr3L 11701987 11702025 chr3L 11702084 11702088 6 83 4.5 4.5 4.5 1.1 101 chr3L 11701987 intron CG11658 - chr3L 11702038 intron CG11658 - chr3L 11702088 intron CG11658 - chr3L_6_11700001 chr3L_11700001 RAL-508 1368 chr3L 11723068 11723113 chr3L 11727883 11727928 Doc 14 4815 3.0 3.5 3.2 3.3 4860 chr3L 11723068 3` UTR Bmcp + chr3L 11725498 intron Bmcp + chr3L 11727928 3` UTR Bmcp + chr3L_14_11725001 chr3L_11725001 RAL-508 1369 chr3L 11739850 11739888 chr3L 11739972 11740010 5 122 20.0 15.5 17.8 0.3 160 chr3L 11739850 intron CG6024 - chr3L 11739930 intron CG6024 - chr3L 11740010 intron CG6024 - chr3L_5_11735001 chr3L_11735001 RAL-508 1370 chr3L 11771430 11771482 chr3L 11771526 11771585 6 95 4.5 0.0 2.2 1.9 155 chr3L 11771430 exon Muc68D - chr3L 11771508 exon Muc68D - chr3L 11771585 exon Muc68D - chr3L_6_11770001 chr3L_11770001 RAL-508 1371 chr3L 7749470 7749471 chr3L 11777678 11777678 11 4028207 15.0 11.5 13.2 0.8 4028208 chr3L 7749470 intron,3` UTR CG32373 +,CG13685 + chr3L 9763574 5` UTR CG8177 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_11_9760001 chr3L_9760001 RAL-508 1372 chr3L 9313026 9313027 chr3L 11777678 11777678 6 2464651 11.0 11.5 11.2 0.5 2464652 chr3L 9313026 intergenic not near genes chr3L 10545352 intron A2bp1 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_6_10545001 chr3L_10545001 RAL-508 1373 chr3L 11777678 11777678 chr3L 12163305 12163305 8 385627 11.5 18.5 15.0 0.5 385627 chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L 11970492 exon Muc68E - chr3L 12163305 intron CG9760 - chr3L_8_11970001 chr3L_11970001 RAL-508 1374 chr3L 11810536 11810555 chr3L 11810634 11810653 7 98 0.0 2.0 1.0 3.5 117 chr3L 11810536 intron CG42255 - chr3L 11810594 intron CG42255 - chr3L 11810653 exon CG42255 - chr3L_7_11810001 chr3L_11810001 RAL-508 1375 chr3L 11849340 11849355 chr3L 11849441 11849475 7 117 3.0 6.5 4.8 1.2 135 chr3L 11849340 intergenic not near genes chr3L 11849408 intergenic not near genes chr3L 11849475 intergenic not near genes chr3L_7_11845001 chr3L_11845001 RAL-508 1376 chr3L 11864537 11864579 chr3L 11865849 11865889 pogo 21 1314 2.5 7.5 5.0 3.5 1352 chr3L 11864537 intron CG44837 - chr3L 11865213 intron CG44837 - chr3L 11865889 intron CG44837 - chr3L_21_11865001 chr3L_11865001 RAL-508 1377 chr3L 11887240 11887286 chr3L 11887357 11887411 5 118 4.0 0.0 2.0 1.7 171 chr3L 11887240 intron CG44837 - chr3L 11887326 intron,3` UTR CG44837 -,CG5897 - chr3L 11887411 intron,3` UTR CG44837 -,CG5897 - chr3L_5_11885001 chr3L_11885001 RAL-508 1378 chr3L 11915971 11915989 chr3L 11916073 11916090 5 102 4.0 2.5 3.2 1.2 119 chr3L 11915971 intron CG44837 - chr3L 11916030 intron CG44837 - chr3L 11916090 intron CG44837 - chr3L_5_11915001 chr3L_11915001 RAL-508 1379 chr3L 12075415 12075457 chr3L 12075524 12075561 5 108 2.5 0.0 1.2 2.3 146 chr3L 12075415 intron Sema-5c - chr3L 12075488 intron Sema-5c - chr3L 12075561 intron Sema-5c - chr3L_5_12075001 chr3L_12075001 RAL-508 1380 chr3L 12092380 12092408 chr3L 12092477 12092503 7 97 2.5 5.0 3.8 1.5 123 chr3L 12092380 intergenic not near genes chr3L 12092442 intergenic not near genes chr3L 12092503 intergenic not near genes chr3L_7_12090001 chr3L_12090001 RAL-508 1381 chr3L 12324227 12324277 chr3L 12324336 12324386 20 104 5.0 3.0 4.0 4.0 159 chr3L 12324227 intergenic not near genes chr3L 12324306 intergenic not near genes chr3L 12324386 intergenic not near genes chr3L_20_12320001 chr3L_12320001 RAL-508 1382 chr3L 12364159 12364175 chr3L 12364316 12364332 7 157 1.5 1.0 1.2 3.2 173 chr3L 12364159 intergenic not near genes chr3L 12364246 intergenic not near genes chr3L 12364332 intergenic not near genes chr3L_7_12360001 chr3L_12360001 RAL-508 1383 chr3L 12369521 12369568 chr3L 12369631 12369678 11 110 2.5 4.0 3.2 2.6 157 chr3L 12369521 intron Ncc69 - chr3L 12369600 intron Ncc69 - chr3L 12369678 intron Ncc69 - chr3L_11_12365001 chr3L_12365001 RAL-508 1384 chr3L 12626134 12626164 chr3L 12626262 12626291 13 129 2.0 0.0 1.0 6.5 157 chr3L 12626134 intergenic not near genes chr3L 12626212 intergenic not near genes chr3L 12626291 intergenic not near genes chr3L_13_12625001 chr3L_12625001 RAL-508 1385 chr3L 12647933 12647956 chr3L 12648028 12648051 5 92 4.0 0.0 2.0 1.7 118 chr3L 12647933 5` UTR CR32111 + chr3L 12647992 5` UTR CR32111 + chr3L 12648051 5` UTR CR32111 + chr3L_5_12645001 chr3L_12645001 RAL-508 1386 chr3L 12768677 12768726 chr3L 12768803 12768820 12 124 2.0 4.0 3.0 3.0 143 chr3L 12768677 3` UTR Hip1 - chr3L 12768748 3` UTR Hip1 - chr3L 12768820 3` UTR Hip1 - chr3L_12_12765001 chr3L_12765001 RAL-508 1387 chr3L 12793660 12793708 chr3L 12797295 12797346 15 3637 35.5 27.0 31.2 0.5 3686 chr3L 12793660 intron,intron Atg1 -,CG42709 + chr3L 12795503 intron,exon Atg1 -,CG42709 + chr3L 12797346 intron Atg1 - chr3L_15_12795001 chr3L_12795001 RAL-508 1388 chr3L 12801971 12802006 chr3L 12802062 12802102 12 93 3.0 5.5 4.2 2.3 131 chr3L 12801971 intron Atg1 - chr3L 12802036 intron Atg1 - chr3L 12802102 intron Atg1 - chr3L_12_12800001 chr3L_12800001 RAL-508 1389 chr3L 12874917 12874943 chr3L 12877229 12877250 jockey 11 2311 5.5 3.5 4.5 2.0 2333 chr3L 12874917 intergenic not near genes chr3L 12876084 intergenic not near genes chr3L 12877250 intergenic not near genes chr3L_11_12875001 chr3L_12875001 RAL-508 1390 chr3L 12894789 12894804 chr3L 12894887 12894902 8 97 9.5 9.5 9.5 0.8 113 chr3L 12894789 intergenic CG14118 + chr3L 12894846 intergenic CG14118 + chr3L 12894902 intergenic CG14118 + chr3L_8_12890001 chr3L_12890001 RAL-508 1391 chr3L 12919261 12919280 chr3L 12924754 12924765 Rt1c 4 5491 11.5 4.0 7.8 0.5 5504 chr3L 12919261 intergenic not near genes chr3L 12922013 intergenic not near genes chr3L 12924765 intergenic not near genes chr3L_4_12920001 chr3L_12920001 RAL-508 1392 chr3L 12928196 12928236 chr3L 12928343 12928379 14 146 3.5 4.0 3.8 2.9 183 chr3L 12928196 intergenic not near genes chr3L 12928288 intergenic not near genes chr3L 12928379 intergenic not near genes chr3L_14_12925001 chr3L_12925001 RAL-508 1393 chr3L 12955111 12955162 chr3L 12955205 12955258 15 93 2.5 5.0 3.8 3.1 147 chr3L 12955111 intergenic CG10752 - chr3L 12955184 intergenic not near genes chr3L 12955258 intergenic not near genes chr3L_15_12955001 chr3L_12955001 RAL-508 1394 chr3L 12957782 12957816 chr3L 12962271 12962318 copia 15 4498 5.0 4.5 4.8 2.6 4536 chr3L 12957782 intergenic not near genes chr3L 12960050 intergenic not near genes chr3L 12962318 intergenic not near genes chr3L_15_12960001 chr3L_12960001 RAL-508 1395 chr3L 12977729 12977777 chr3L 12977852 12977899 11 119 4.0 5.5 4.8 1.9 170 chr3L 12977729 intergenic not near genes chr3L 12977814 intergenic not near genes chr3L 12977899 intergenic not near genes chr3L_11_12975001 chr3L_12975001 RAL-508 1396 chr3L 12978510 12978548 chr3L 12978609 12978652 4 102 2.5 4.5 3.5 0.9 142 chr3L 12978510 intergenic not near genes chr3L 12978581 intergenic not near genes chr3L 12978652 intergenic not near genes chr3L_4_12975001 chr3L_12975001 RAL-508 1397 chr3L 13000988 13001037 chr3L 13001097 13001146 9 109 2.0 3.0 2.5 2.6 158 chr3L 13000988 intergenic not near genes chr3L 13001067 intergenic not near genes chr3L 13001146 intergenic not near genes chr3L_9_13000001 chr3L_13000001 RAL-508 1398 chr3L 13085041 13085085 chr3L 13085137 13085184 11 92 1.5 6.0 3.8 2.3 143 chr3L 13085041 intergenic not near genes chr3L 13085112 intergenic not near genes chr3L 13085184 intergenic not near genes chr3L_11_13085001 chr3L_13085001 RAL-508 1399 chr3L 13095797 13095823 chr3L 13095905 13095929 5 107 9.0 0.0 4.5 0.9 132 chr3L 13095797 intergenic not near genes chr3L 13095863 intergenic not near genes chr3L 13095929 intergenic not near genes chr3L_5_13095001 chr3L_13095001 RAL-508 1400 chr3L 13182428 13182474 chr3L 13182526 13182568 8 97 2.0 0.5 1.2 3.6 140 chr3L 13182428 intergenic not near genes chr3L 13182498 intergenic not near genes chr3L 13182568 intergenic not near genes chr3L_8_13180001 chr3L_13180001 RAL-508 1401 chr3L 13198285 13198329 chr3L 13198404 13198441 16 112 3.5 2.0 2.8 4.2 156 chr3L 13198285 intergenic not near genes chr3L 13198363 intergenic not near genes chr3L 13198441 intergenic not near genes chr3L_16_13195001 chr3L_13195001 RAL-508 1402 chr3L 13229401 13229408 chr3L 13229517 13229524 4 116 3.5 3.0 3.2 1.0 123 chr3L 13229401 intron caps + chr3L 13229462 intron caps + chr3L 13229524 intron caps + chr3L_4_13225001 chr3L_13225001 RAL-508 1403 chr3L 13311000 13311047 chr3L 13311101 13311119 7 95 3.5 3.0 3.2 1.7 119 chr3L 13311000 intergenic not near genes chr3L 13311060 intergenic not near genes chr3L 13311119 intergenic not near genes chr3L_7_13310001 chr3L_13310001 RAL-508 1404 chr3L 13315852 13315862 chr3L 13315959 13315969 4 107 3.0 3.0 3.0 1.0 117 chr3L 13315852 intergenic not near genes chr3L 13315910 intergenic not near genes chr3L 13315969 intergenic not near genes chr3L_4_13315001 chr3L_13315001 RAL-508 1405 chr3L 13375893 13375908 chr3L 13375993 13376008 4 100 7.5 2.0 4.8 0.7 115 chr3L 13375893 intergenic not near genes chr3L 13375950 intergenic not near genes chr3L 13376008 intergenic not near genes chr3L_4_13375001 chr3L_13375001 RAL-508 1406 chr3L 13392745 13392761 chr3L 13392848 13392864 7 102 7.5 0.0 3.8 1.5 119 chr3L 13392745 intergenic not near genes chr3L 13392804 intergenic not near genes chr3L 13392864 intergenic not near genes chr3L_7_13390001 chr3L_13390001 RAL-508 1407 chr3L 13525144 13525190 chr3L 13532960 13532966 roo 13 7810 6.5 6.0 6.2 1.8 7822 chr3L 13525144 intergenic not near genes chr3L 13529055 intergenic not near genes chr3L 13532966 intergenic not near genes chr3L_13_13525001 chr3L_13525001 RAL-508 1408 chr3L 13574606 13574618 chr3L 13580137 13580149 Rt1c 6 5531 4.5 2.0 3.2 1.4 5543 chr3L 13574606 intron bru-3 - chr3L 13577378 intron bru-3 - chr3L 13580149 intron bru-3 - chr3L_6_13575001 chr3L_13575001 RAL-508 1409 chr3L 13740027 13740044 chr3L 13740130 13740156 10 111 3.0 4.5 3.8 2.1 129 chr3L 13740027 intron bru-3 - chr3L 13740092 intron bru-3 - chr3L 13740156 intron bru-3 - chr3L_10_13740001 chr3L_13740001 RAL-508 1410 chr3L 13785139 13785191 chr3L 13785393 13785444 10 253 2.5 4.0 3.2 2.4 305 chr3L 13785139 intron bru-3 - chr3L 13785292 intron bru-3 - chr3L 13785444 intron bru-3 - chr3L_10_13785001 chr3L_13785001 RAL-508 1411 chr3L 13804536 13804572 chr3L 13822842 13822878 roo 15 18306 3.0 5.5 4.2 2.9 18342 chr3L 13804536 intergenic not near genes chr3L 13813707 intergenic not near genes chr3L 13822878 intergenic not near genes chr3L_15_13810001 chr3L_13810001 RAL-508 1412 chr3L 13834328 13834341 chr3L 13834446 13834464 4 125 4.5 3.5 4.0 0.8 136 chr3L 13834328 intergenic not near genes chr3L 13834396 intergenic not near genes chr3L 13834464 intergenic not near genes chr3L_4_13830001 chr3L_13830001 RAL-508 1413 chr3L 13919697 13919745 chr3L 13919800 13919841 17 99 2.0 0.5 1.2 7.7 144 chr3L 13919697 intron Rgl - chr3L 13919769 intron Rgl - chr3L 13919841 intron Rgl - chr3L_17_13915001 chr3L_13915001 RAL-508 1414 chr3L 13941626 13941646 chr3L 13941737 13941760 4 112 1.0 0.0 0.5 2.7 134 chr3L 13941626 intron CG32137 + chr3L 13941693 intron CG32137 + chr3L 13941760 intron CG32137 + chr3L_4_13940001 chr3L_13940001 RAL-508 1415 chr3L 14165172 14165215 chr3L 14165270 14165294 5 94 4.5 2.5 3.5 1.1 122 chr3L 14165172 intergenic not near genes chr3L 14165233 intergenic not near genes chr3L 14165294 intergenic not near genes chr3L_5_14165001 chr3L_14165001 RAL-508 1416 chr3L 14194704 14194742 chr3L 14194799 14194835 5 95 1.5 3.0 2.2 1.6 131 chr3L 14194704 intron nuf + chr3L 14194770 intron nuf + chr3L 14194835 intron nuf + chr3L_5_14190001 chr3L_14190001 RAL-508 1417 chr3L 14245556 14245593 chr3L 14245670 14245707 1360 8 114 5.0 2.5 3.8 1.7 151 chr3L 14245556 3` UTR CR44561 - chr3L 14245632 3` UTR CR44561 - chr3L 14245707 intergenic CR44561 -,CR44560 + chr3L_8_14245001 chr3L_14245001 RAL-508 1418 chr3L 14282567 14282604 chr3L 14282667 14282704 8 98 4.0 6.0 5.0 1.3 137 chr3L 14282567 intron fz + chr3L 14282636 intron fz + chr3L 14282704 intron fz + chr3L_8_14280001 chr3L_14280001 RAL-508 1419 chr3L 14295976 14296008 chr3L 14296467 14296508 roo 13 502 2.0 5.0 3.5 2.9 532 chr3L 14295976 intron fz + chr3L 14296242 intron fz + chr3L 14296508 intron fz + chr3L_13_14295001 chr3L_14295001 RAL-508 1420 chr3L 14302928 14302966 chr3L 14303016 14303064 14 95 1.5 3.5 2.5 4.0 136 chr3L 14302928 intron fz + chr3L 14302996 intron fz + chr3L 14303064 intron fz + chr3L_14_14300001 chr3L_14300001 RAL-508 1421 chr3L 14341420 14341439 chr3L 14341575 14341591 8 154 0.0 7.5 3.8 1.7 171 chr3L 14341420 intron fz + chr3L 14341506 intron fz + chr3L 14341591 intron fz + chr3L_8_14340001 chr3L_14340001 RAL-508 1422 chr3L 14439238 14439245 chr3L 14439421 14439427 4 183 2.5 6.5 4.5 0.7 189 chr3L 14439238 intron bbg - chr3L 14439332 intron bbg - chr3L 14439427 intron bbg - chr3L_4_14435001 chr3L_14435001 RAL-508 1423 chr3L 14468432 14468475 chr3L 14473658 14473700 copia 4 5226 1.0 2.5 1.8 1.4 5268 chr3L 14468432 intron bbg - chr3L 14471066 intron bbg - chr3L 14473700 intron bbg - chr3L_4_14470001 chr3L_14470001 RAL-508 1424 chr3L 14486008 14486045 chr3L 14486105 14486146 9 100 7.5 3.5 5.5 1.4 138 chr3L 14486008 intron bbg - chr3L 14486077 intron bbg - chr3L 14486146 intron bbg - chr3L_9_14485001 chr3L_14485001 RAL-508 1425 chr3L 14522082 14522128 chr3L 14522201 14522245 10 117 2.5 2.5 2.5 2.9 163 chr3L 14522082 intron bbg - chr3L 14522164 intron bbg - chr3L 14522245 intron bbg - chr3L_10_14520001 chr3L_14520001 RAL-508 1426 chr3L 14587559 14587600 chr3L 14587861 14587878 17 299 4.5 3.0 3.8 3.5 319 chr3L 14587559 intron HGTX - chr3L 14587718 intron HGTX - chr3L 14587878 intron HGTX - chr3L_17_14585001 chr3L_14585001 RAL-508 1427 chr3L 14603064 14603075 chr3L 14603161 14603172 4 97 0.0 3.5 1.8 1.4 108 chr3L 14603064 intergenic not near genes chr3L 14603118 intergenic not near genes chr3L 14603172 intergenic not near genes chr3L_4_14600001 chr3L_14600001 RAL-508 1428 chr3L 14606394 14606433 chr3L 14606511 14606543 9 114 3.5 4.0 3.8 1.9 149 chr3L 14606394 intergenic not near genes chr3L 14606468 intergenic not near genes chr3L 14606543 intergenic not near genes chr3L_9_14605001 chr3L_14605001 RAL-508 1429 chr3L 14633766 14633812 chr3L 14633882 14633928 8 116 1.5 0.5 1.0 4.0 162 chr3L 14633766 intron dlp + chr3L 14633847 intron dlp + chr3L 14633928 intron dlp + chr3L_8_14630001 chr3L_14630001 RAL-508 1430 chr3L 14652627 14652670 chr3L 14652726 14652769 10 98 4.0 4.5 4.2 1.9 142 chr3L 14652627 intron dlp + chr3L 14652698 intron dlp + chr3L 14652769 intron dlp + chr3L_10_14650001 chr3L_14650001 RAL-508 1431 chr3L 14693544 14693553 chr3L 14693645 14693657 6 109 8.5 3.0 5.8 0.9 113 chr3L 14693544 intron ome + chr3L 14693600 intron ome + chr3L 14693657 intron ome + chr3L_6_14690001 chr3L_14690001 RAL-508 1432 chr3L 14693558 14693572 chr3L 14693643 14693691 8 110 4.0 3.0 3.5 1.8 133 chr3L 14693558 intron ome + chr3L 14693624 intron ome + chr3L 14693691 intron ome + chr3L_8_14690001 chr3L_14690001 RAL-508 1433 chr3L 14702005 14702020 chr3L 14702101 14702119 4 98 0.0 3.5 1.8 1.4 114 chr3L 14702005 intron ome + chr3L 14702062 intron ome + chr3L 14702119 intron ome + chr3L_4_14700001 chr3L_14700001 RAL-508 1434 chr3L 14721194 14721209 chr3L 14723022 14723044 Rt1c 4 1842 5.5 3.0 4.2 0.8 1850 chr3L 14721194 intron ome + chr3L 14722119 intron ome + chr3L 14723044 intron ome + chr3L_4_14720001 chr3L_14720001 RAL-508 1435 chr3L 14725188 14725221 chr3L 14725513 14725545 7 323 3.5 0.0 1.8 2.5 357 chr3L 14725188 intron ome + chr3L 14725366 intron ome + chr3L 14725545 intron ome + chr3L_7_14725001 chr3L_14725001 RAL-508 1436 chr3L 14725591 14725622 chr3L 14728605 14728634 Doc 4 3014 0.5 7.0 3.8 0.8 3043 chr3L 14725591 intron ome + chr3L 14727112 intron ome + chr3L 14728634 intron ome + chr3L_4_14725001 chr3L_14725001 RAL-508 1437 chr3L 14731208 14731242 chr3L 14731418 14731452 12 209 3.5 5.5 4.5 2.2 244 chr3L 14731208 intron ome + chr3L 14731330 intron ome + chr3L 14731452 intron ome + chr3L_12_14730001 chr3L_14730001 RAL-508 1438 chr3L 14741122 14741162 chr3L 14741219 14741259 15 97 9.0 3.5 6.2 2.1 137 chr3L 14741122 intron ome + chr3L 14741190 intron ome + chr3L 14741259 intron ome + chr3L_15_14740001 chr3L_14740001 RAL-508 1439 chr3L 15085027 15085081 chr3L 15086213 15086264 1360 9 1183 1.0 1.0 1.0 4.5 1237 chr3L 15085027 intron cp309 - chr3L 15085646 intron cp309 - chr3L 15086264 intron cp309 - chr3L_9_15085001 chr3L_15085001 RAL-508 1440 chr3L 15257413 15257437 chr3L 15257646 15257670 6 232 3.5 2.0 2.8 1.6 257 chr3L 15257413 intergenic not near genes chr3L 15257542 intergenic not near genes chr3L 15257670 intergenic not near genes chr3L_6_15255001 chr3L_15255001 RAL-508 1441 chr3L 15295747 15295780 chr3L 15298610 15298640 gypsy5 4 2862 6.5 3.0 4.8 0.7 2893 chr3L 15295747 intergenic not near genes chr3L 15297194 intergenic not near genes chr3L 15298640 intergenic Best4 + chr3L_4_15295001 chr3L_15295001 RAL-508 1442 chr3L 15350750 15350796 chr3L 15350842 15350892 12 95 3.5 6.0 4.8 2.1 142 chr3L 15350750 intergenic not near genes chr3L 15350821 intergenic not near genes chr3L 15350892 intergenic not near genes chr3L_12_15350001 chr3L_15350001 RAL-508 1443 chr3L 15353348 15353394 chr3L 15353570 15353621 10 223 0.5 3.5 2.0 3.3 273 chr3L 15353348 intergenic not near genes chr3L 15353484 intergenic not near genes chr3L 15353621 intergenic not near genes chr3L_10_15350001 chr3L_15350001 RAL-508 1444 chr3L 15384951 15384987 chr3L 15385097 15385110 10 142 5.5 1.5 3.5 2.2 159 chr3L 15384951 intergenic not near genes chr3L 15385030 intergenic not near genes chr3L 15385110 intergenic not near genes chr3L_10_15385001 chr3L_15385001 RAL-508 1445 chr3L 15405999 15406040 chr3L 15406101 15406138 6 101 2.0 5.0 3.5 1.3 139 chr3L 15405999 intergenic not near genes chr3L 15406068 intergenic not near genes chr3L 15406138 intergenic not near genes chr3L_6_15405001 chr3L_15405001 RAL-508 1446 chr3L 15466017 15466125 chr3L 15466119 15466241 6 106 0.0 0.0 0.0 6.0 224 chr3L 15466017 intergenic not near genes chr3L 15466129 intergenic not near genes chr3L 15466241 intergenic not near genes chr3L_6_15465001 chr3L_15465001 RAL-508 1447 chr3L 15701035 15701058 chr3L 15701184 15701198 7 147 7.0 2.5 4.8 1.2 163 chr3L 15701035 intergenic not near genes chr3L 15701116 intergenic not near genes chr3L 15701198 intergenic not near genes chr3L_7_15700001 chr3L_15700001 RAL-508 1448 chr3L 15701059 15701072 chr3L 15701179 15701220 7 142 5.0 1.5 3.2 1.7 161 chr3L 15701059 intergenic not near genes chr3L 15701140 intergenic not near genes chr3L 15701220 intergenic not near genes chr3L_7_15700001 chr3L_15700001 RAL-508 1449 chr3L 15731996 15732046 chr3L 15732096 15732146 15 98 4.0 0.5 2.2 4.7 150 chr3L 15731996 intergenic not near genes chr3L 15732071 intergenic not near genes chr3L 15732146 intergenic not near genes chr3L_15_15730001 chr3L_15730001 RAL-508 1450 chr3L 15737370 15737402 chr3L 15737471 15737512 9 109 1.5 0.5 1.0 4.5 142 chr3L 15737370 intergenic not near genes chr3L 15737441 intergenic not near genes chr3L 15737512 intergenic not near genes chr3L_9_15735001 chr3L_15735001 RAL-508 1451 chr3L 15744587 15744609 chr3L 15745042 15745066 6 458 24.0 16.5 20.2 0.3 479 chr3L 15744587 intergenic not near genes chr3L 15744826 intergenic not near genes chr3L 15745066 intergenic not near genes chr3L_6_15740001 chr3L_15740001 RAL-508 1452 chr3L 15754367 15754377 chr3L 15754482 15754492 4 114 7.5 2.0 4.8 0.7 125 chr3L 15754367 intergenic not near genes chr3L 15754430 intergenic not near genes chr3L 15754492 intergenic not near genes chr3L_4_15750001 chr3L_15750001 RAL-508 1453 chr3L 15756869 15756895 chr3L 15756962 15756996 6 98 7.5 0.0 3.8 1.2 127 chr3L 15756869 intergenic not near genes chr3L 15756932 intergenic not near genes chr3L 15756996 intergenic not near genes chr3L_6_15755001 chr3L_15755001 RAL-508 1454 chr3L 15791889 15791928 chr3L 15792202 15792240 10 307 5.0 6.0 5.5 1.5 351 chr3L 15791889 intergenic not near genes chr3L 15792064 intergenic not near genes chr3L 15792240 intergenic not near genes chr3L_10_15790001 chr3L_15790001 RAL-508 1455 chr3L 15929183 15929226 chr3L 15938350 15938393 roo 10 9167 3.0 5.0 4.0 2.0 9210 chr3L 15929183 intron Pka-C3 - chr3L 15933788 intron Pka-C3 - chr3L 15938393 intron Pka-C3 - chr3L_10_15930001 chr3L_15930001 RAL-508 1456 chr3L 15951065 15951112 chr3L 15951164 15951169 21 95 6.5 8.5 7.5 2.5 104 chr3L 15951065 intron Pka-C3 - chr3L 15951117 intron Pka-C3 - chr3L 15951169 intron Pka-C3 - chr3L_21_15950001 chr3L_15950001 RAL-508 1457 chr3L 15956245 15956288 chr3L 15956349 15956392 9 103 5.5 4.5 5.0 1.5 147 chr3L 15956245 3` UTR GXIVsPLA2 + chr3L 15956318 3` UTR GXIVsPLA2 + chr3L 15956392 3` UTR GXIVsPLA2 + chr3L_9_15955001 chr3L_15955001 RAL-508 1458 chr3L 15979087 15979120 chr3L 15979207 15979254 14 131 3.5 6.0 4.8 2.4 167 chr3L 15979087 intron,intron brm -,CG17028 + chr3L 15979170 intron,intron brm -,CG17028 + chr3L 15979254 intron,intron brm -,CG17028 + chr3L_14_15975001 chr3L_15975001 RAL-508 1459 chr3L 16070744 16070759 chr3L 16070841 16070856 6 97 5.0 5.5 5.2 1.0 112 chr3L 16070744 intron Mbs + chr3L 16070800 intron Mbs + chr3L 16070856 exon Mbs + chr3L_6_16070001 chr3L_16070001 RAL-508 1460 chr3L 16092146 16092199 chr3L 16092260 16092311 7 113 2.0 3.0 2.5 2.0 165 chr3L 16092146 intron ClC-c + chr3L 16092228 intron ClC-c + chr3L 16092311 intron ClC-c + chr3L_7_16090001 chr3L_16090001 RAL-508 1461 chr3L 16158786 16158837 chr3L 16158891 16158942 12 103 2.0 2.0 2.0 4.0 156 chr3L 16158786 intron CG5151 - chr3L 16158864 intron CG5151 - chr3L 16158942 intron CG5151 - chr3L_12_16155001 chr3L_16155001 RAL-508 1462 chr3L 16184089 16184132 chr3L 16188927 16188971 X-element 15 4837 4.5 2.5 3.5 3.3 4882 chr3L 16184089 intergenic not near genes chr3L 16186530 intergenic not near genes chr3L 16188971 intergenic not near genes chr3L_15_16185001 chr3L_16185001 RAL-508 1463 chr3L 16198372 16198401 chr3L 16198477 16198504 10 104 3.5 5.0 4.2 1.9 132 chr3L 16198372 intron CG33687 + chr3L 16198438 exon CG33687 + chr3L 16198504 exon CG33687 + chr3L_10_16195001 chr3L_16195001 RAL-508 1464 chr3L 16198402 16198414 chr3L 16198475 16198515 5 91 1.5 5.0 3.2 1.2 113 chr3L 16198402 intron CG33687 + chr3L 16198458 exon CG33687 + chr3L 16198515 exon CG33687 + chr3L_5_16195001 chr3L_16195001 RAL-508 1465 chr3L 16212583 16212821 chr3L 16212679 16212932 16 100 2.5 0.5 1.5 6.4 349 chr3L 16212583 intergenic CG13073 - chr3L 16212758 intergenic CG13073 - chr3L 16212932 intergenic CG13073 - chr3L_16_16210001 chr3L_16210001 RAL-508 1466 chr3L 16239921 16239944 chr3L 16240017 16240040 7 96 6.5 5.5 6.0 1.0 119 chr3L 16239921 intergenic l(3)72Dr + chr3L 16239980 intergenic not near genes chr3L 16240040 intergenic not near genes chr3L_7_16235001 chr3L_16235001 RAL-508 1467 chr3L 16310537 16310588 chr3L 16311090 16311142 16 550 2.5 3.5 3.0 4.0 605 chr3L 16310537 5` UTR CR32160 + chr3L 16310840 5` UTR CR32160 + chr3L 16311142 5` UTR CR32160 + chr3L_16_16310001 chr3L_16310001 RAL-508 1468 chr3L 16443827 16443876 chr3L 16446187 16446211 Doc 16 2358 3.5 5.0 4.2 3.1 2384 chr3L 16443827 intron,intron CG33158 +,dsx-c73A - chr3L 16445019 intron,intron CG33158 +,dsx-c73A - chr3L 16446211 intron,intron CG33158 +,dsx-c73A - chr3L_16_16445001 chr3L_16445001 RAL-508 1469 chr3L 16493959 16493977 chr3L 16494493 16494514 jockey 6 536 11.5 12.5 12.0 0.5 555 chr3L 16493959 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494236 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494514 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_6_16490001 chr3L_16490001 RAL-508 1470 chr3L 16493982 16494008 chr3L 16494490 16494524 jockey 10 528 6.0 11.0 8.5 1.1 542 chr3L 16493982 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494253 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494524 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_10_16490001 chr3L_16490001 RAL-508 1471 chr3L 16533543 16533587 chr3L 16533674 16533718 7 129 0.5 2.5 1.5 2.8 175 chr3L 16533543 intron CG43373 - chr3L 16533630 intron CG43373 - chr3L 16533718 intron CG43373 - chr3L_7_16530001 chr3L_16530001 RAL-508 1472 chr3L 16540037 16540087 chr3L 16540144 16540153 16 105 3.5 4.5 4.0 3.2 116 chr3L 16540037 intron CG43373 - chr3L 16540095 intron CG43373 - chr3L 16540153 intron CG43373 - chr3L_16_16540001 chr3L_16540001 RAL-508 1473 chr3L 16616516 16616540 chr3L 16621857 16621888 297 6 5344 3.5 3.5 3.5 1.3 5372 chr3L 16616516 3` UTR Abl - chr3L 16619202 3` UTR Abl - chr3L 16621888 3` UTR Abl - chr3L_6_16615001 chr3L_16615001 RAL-508 1474 chr3L 16650982 16651027 chr3L 16651080 16651109 13 94 3.5 3.0 3.2 3.1 127 chr3L 16650982 intron Baldspot - chr3L 16651046 intron Baldspot - chr3L 16651109 intron Baldspot - chr3L_13_16650001 chr3L_16650001 RAL-508 1475 chr3L 16653290 16653342 chr3L 16653631 16653681 10 341 2.0 5.5 3.8 2.1 391 chr3L 16653290 intron Baldspot - chr3L 16653486 intron Baldspot - chr3L 16653681 intron Baldspot - chr3L_10_16650001 chr3L_16650001 RAL-508 1476 chr3L 16664567 16664583 chr3L 16664692 16664737 6 144 3.5 4.0 3.8 1.2 170 chr3L 16664567 intron Galphaf - chr3L 16664652 intron Galphaf - chr3L 16664737 intron Galphaf - chr3L_6_16660001 chr3L_16660001 RAL-508 1477 chr3L 16684009 16684036 chr3L 16689249 16689277 copia 4 5241 0.5 1.5 1.0 2.0 5268 chr3L 16684009 intron,intron Lasp -,CG43954 - chr3L 16686643 intron,intron Lasp -,CG43954 - chr3L 16689277 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_4_16685001 chr3L_16685001 RAL-508 1478 chr3L 16698363 16698404 chr3L 16698480 16698520 4 116 2.5 3.5 3.0 1.0 157 chr3L 16698363 intron,intron Lasp -,CG43954 - chr3L 16698442 intron,intron Lasp -,CG43954 - chr3L 16698520 intron,intron Lasp -,CG43954 - chr3L_4_16695001 chr3L_16695001 RAL-508 1479 chr3L 16714823 16714869 chr3L 16714927 16714973 9 104 2.5 0.0 1.2 4.1 150 chr3L 16714823 intron Dab + chr3L 16714898 intron Dab + chr3L 16714973 intron Dab + chr3L_9_16710001 chr3L_16710001 RAL-508 1480 chr3L 16728077 16728104 chr3L 16728182 16728217 11 107 3.5 0.0 1.8 3.9 140 chr3L 16728077 intergenic PGRP-SB1 -,Dbp73D - chr3L 16728147 intergenic PGRP-SB1 -,Dbp73D - chr3L 16728217 intergenic PGRP-SB1 -,Dbp73D - chr3L_11_16725001 chr3L_16725001 RAL-508 1481 chr3L 16757622 16757668 chr3L 16757732 16757778 8 109 0.0 5.0 2.5 2.3 156 chr3L 16757622 intergenic not near genes chr3L 16757700 intergenic not near genes chr3L 16757778 intergenic not near genes chr3L_8_16755001 chr3L_16755001 RAL-508 1482 chr3L 16772472 16772507 chr3L 16772582 16772616 11 108 6.0 6.0 6.0 1.6 144 chr3L 16772472 intron Nrt + chr3L 16772544 intron Nrt + chr3L 16772616 intron Nrt + chr3L_11_16770001 chr3L_16770001 RAL-508 1483 chr3L 16786974 16786995 chr3L 16787066 16787089 8 94 0.0 6.5 3.2 1.9 115 chr3L 16786974 intergenic Int6 - chr3L 16787032 intergenic Int6 - chr3L 16787089 intergenic Int6 -,CG9674 - chr3L_8_16785001 chr3L_16785001 RAL-508 1484 chr3L 16786999 16787003 chr3L 16787044 16787049 4 56 0.5 5.0 2.8 1.1 50 chr3L 16786999 intergenic Int6 - chr3L 16787024 intergenic Int6 - chr3L 16787049 intergenic Int6 - chr3L_4_16785001 chr3L_16785001 RAL-508 1485 chr3L 16818733 16818780 chr3L 16818826 16818874 14 95 4.0 3.5 3.8 2.9 141 chr3L 16818733 intron,intron nudC +,CG13024 - chr3L 16818804 intron,intron nudC +,CG13024 - chr3L 16818874 intron,intron nudC +,CG13024 - chr3L_14_16815001 chr3L_16815001 RAL-508 1486 chr3L 16845004 16845013 chr3L 16845137 16845144 6 132 5.5 3.0 4.2 1.2 140 chr3L 16845004 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845074 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845144 intergenic CG9669 -,CG9715 + chr3L_6_16845001 chr3L_16845001 RAL-508 1487 chr3L 16867552 16867561 chr3L 16867650 16867658 4 98 6.0 7.5 6.8 0.5 106 chr3L 16867552 intron Lmpt + chr3L 16867605 intron Lmpt + chr3L 16867658 intron Lmpt + chr3L_4_16865001 chr3L_16865001 RAL-508 1488 chr3L 16873325 16873375 chr3L 16873450 16873497 11 125 4.5 4.0 4.2 2.1 172 chr3L 16873325 intron Lmpt + chr3L 16873411 intron Lmpt + chr3L 16873497 intron Lmpt + chr3L_11_16870001 chr3L_16870001 RAL-508 1489 chr3L 16912919 16912944 chr3L 16913017 16913042 6 98 0.0 1.0 0.5 4.0 123 chr3L 16912919 intron Lmpt + chr3L 16912980 intron Lmpt + chr3L 16913042 intron Lmpt + chr3L_6_16910001 chr3L_16910001 RAL-508 1490 chr3L 16945715 16945721 chr3L 16954888 16954889 roo 4 9170 8.5 10.0 9.2 0.4 9174 chr3L 16945715 exon Obp73a + chr3L 16950302 intergenic not near genes chr3L 16954889 5` UTR Nc73EF + chr3L_4_16950001 chr3L_16950001 RAL-508 1491 chr3L 16945734 16945760 chr3L 16954884 16954886 roo 9 9155 4.5 10.0 7.2 1.1 9152 chr3L 16945734 exon Obp73a + chr3L 16950310 intergenic not near genes chr3L 16954886 5` UTR Nc73EF + chr3L_9_16950001 chr3L_16950001 RAL-508 1492 chr3L 17026781 17026804 chr3L 17026881 17026901 4 97 8.5 5.0 6.8 0.5 120 chr3L 17026781 exon Fit2 + chr3L 17026841 3` UTR Fit2 + chr3L 17026901 3` UTR Fit2 + chr3L_4_17025001 chr3L_17025001 RAL-508 1493 chr3L 17026807 17026823 chr3L 17026871 17026923 5 93 5.0 3.5 4.2 1.0 116 chr3L 17026807 3` UTR Fit2 + chr3L 17026865 3` UTR Fit2 + chr3L 17026923 3` UTR Fit2 + chr3L_5_17025001 chr3L_17025001 RAL-508 1494 chr3L 17027148 17027173 chr3L 17027258 17027285 6 112 0.5 0.0 0.2 5.0 137 chr3L 17027148 intergenic Fit2 +,CG7730 + chr3L 17027216 intergenic Fit2 +,CG7730 + chr3L 17027285 intergenic Fit2 +,CG7730 + chr3L_6_17025001 chr3L_17025001 RAL-508 1495 chr3L 17034928 17034955 chr3L 17035136 17035163 G2 5 208 1.0 0.5 0.8 2.8 235 chr3L 17034928 intergenic not near genes chr3L 17035046 intergenic not near genes chr3L 17035163 intergenic not near genes chr3L_5_17035001 chr3L_17035001 RAL-508 1496 chr3L 17084989 17085028 chr3L 17094158 17094197 roo 7 9169 6.0 5.0 5.5 1.1 9208 chr3L 17084989 intron Rbp6 - chr3L 17089593 intron Rbp6 - chr3L 17094197 intron Rbp6 - chr3L_7_17085001 chr3L_17085001 RAL-508 1497 chr3L 17113849 17113900 chr3L 17113954 17114004 13 100 4.0 4.0 4.0 2.6 155 chr3L 17113849 intron Rbp6 - chr3L 17113926 intron Rbp6 - chr3L 17114004 intron Rbp6 - chr3L_13_17110001 chr3L_17110001 RAL-508 1498 chr3L 17120632 17120683 chr3L 17120728 17120777 13 96 5.5 4.5 5.0 2.2 145 chr3L 17120632 intron Rbp6 - chr3L 17120704 intron Rbp6 - chr3L 17120777 intron Rbp6 - chr3L_13_17120001 chr3L_17120001 RAL-508 1499 chr3L 17222449 17222458 chr3L 17222642 17222651 5 193 2.0 2.0 2.0 1.7 202 chr3L 17222449 intron Rbp6 - chr3L 17222550 intron Rbp6 - chr3L 17222651 intron Rbp6 - chr3L_5_17220001 chr3L_17220001 RAL-508 1500 chr3L 17510714 17510741 chr3L 17510818 17510845 12 101 6.0 3.0 4.5 2.2 131 chr3L 17510714 exon Oatp74D + chr3L 17510780 intron Oatp74D + chr3L 17510845 intron Oatp74D + chr3L_12_17510001 chr3L_17510001 RAL-508 1501 chr3L 17510742 17510761 chr3L 17510817 17510865 7 97 4.0 3.0 3.5 1.6 123 chr3L 17510742 exon Oatp74D + chr3L 17510804 intron Oatp74D + chr3L 17510865 intron Oatp74D + chr3L_7_17510001 chr3L_17510001 RAL-508 1502 chr3L 17516958 17517005 chr3L 17524536 17524575 412 8 7572 4.0 3.0 3.5 1.8 7617 chr3L 17516958 intron CG7564 + chr3L 17520766 intron CG7564 + chr3L 17524575 3` UTR CG7564 + chr3L_8_17520001 chr3L_17520001 RAL-508 1503 chr3L 17583533 17583544 chr3L 17583643 17583658 8 113 1.5 9.5 5.5 1.2 125 chr3L 17583533 intron Eip74EF - chr3L 17583596 intron Eip74EF - chr3L 17583658 intron Eip74EF - chr3L_8_17580001 chr3L_17580001 RAL-508 1504 chr3L 17586950 17586999 chr3L 17587104 17587153 5 154 1.5 3.0 2.2 1.6 203 chr3L 17586950 intron Eip74EF - chr3L 17587052 intron Eip74EF - chr3L 17587153 intron Eip74EF - chr3L_5_17585001 chr3L_17585001 RAL-508 1505 chr3L 17592769 17592816 chr3L 17592879 17592924 14 110 2.5 0.5 1.5 5.6 155 chr3L 17592769 intron Eip74EF - chr3L 17592846 intron Eip74EF - chr3L 17592924 intron Eip74EF - chr3L_14_17590001 chr3L_17590001 RAL-508 1506 chr3L 17594221 17594263 chr3L 17594322 17594364 11 99 2.0 5.0 3.5 2.4 143 chr3L 17594221 intron Eip74EF - chr3L 17594292 intron Eip74EF - chr3L 17594364 intron Eip74EF - chr3L_11_17590001 chr3L_17590001 RAL-508 1507 chr3L 17690831 17690882 chr3L 17690931 17690978 5 99 0.0 0.5 0.2 4.2 147 chr3L 17690831 intron Ccn + chr3L 17690904 intron Ccn + chr3L 17690978 intron Ccn + chr3L_5_17690001 chr3L_17690001 RAL-508 1508 chr3L 17702332 17702380 chr3L 17702436 17702484 8 102 2.0 2.0 2.0 2.7 152 chr3L 17702332 intron Ccn + chr3L 17702408 intron Ccn + chr3L 17702484 intron Ccn + chr3L_8_17700001 chr3L_17700001 RAL-508 1509 chr3L 17730836 17730867 chr3L 17738186 17738217 mdg1 6 7350 3.0 5.0 4.0 1.2 7381 chr3L 17730836 intron Ccn + chr3L 17734526 intron Ccn + chr3L 17738217 intron Ccn + chr3L_6_17730001 chr3L_17730001 RAL-508 1510 chr3L 17789844 17789873 chr3L 17789939 17789969 11 95 2.0 7.5 4.8 1.9 125 chr3L 17789844 intergenic not near genes chr3L 17789906 intergenic not near genes chr3L 17789969 intergenic not near genes chr3L_11_17785001 chr3L_17785001 RAL-508 1511 chr3L 17790606 17790633 chr3L 17790891 17790908 8 282 2.5 2.5 2.5 2.3 302 chr3L 17790606 intergenic CG42815 - chr3L 17790757 intergenic CG42815 - chr3L 17790908 intergenic CG42815 - chr3L_8_17790001 chr3L_17790001 RAL-508 1512 chr3L 17799794 17799840 chr3L 17801601 17801647 S-element 8 1806 0.5 0.5 0.5 5.3 1853 chr3L 17799794 intron NUCB1 - chr3L 17800720 intron NUCB1 - chr3L 17801647 intron NUCB1 - chr3L_8_17800001 chr3L_17800001 RAL-508 1513 chr3L 17836195 17836234 chr3L 17836292 17836331 8 97 3.5 2.5 3.0 2.0 136 chr3L 17836195 intron Grd + chr3L 17836263 intron Grd + chr3L 17836331 intron Grd + chr3L_8_17835001 chr3L_17835001 RAL-508 1514 chr3L 17906564 17906608 chr3L 17906685 17906729 11 119 4.0 3.0 3.5 2.4 165 chr3L 17906564 intron Prestin - chr3L 17906646 intron Prestin - chr3L 17906729 intron Prestin - chr3L_11_17905001 chr3L_17905001 RAL-508 1515 chr3L 17918352 17918403 chr3L 17921175 17921226 opus 9 2821 2.0 2.0 2.0 3.0 2874 chr3L 17918352 intergenic not near genes chr3L 17919789 intergenic not near genes chr3L 17921226 intergenic not near genes chr3L_9_17915001 chr3L_17915001 RAL-508 1516 chr3L 17991563 17991598 chr3L 17991661 17991688 11 96 2.5 3.0 2.8 2.9 125 chr3L 17991563 intron Eip75B - chr3L 17991626 intron Eip75B - chr3L 17991688 intron Eip75B - chr3L_11_17990001 chr3L_17990001 RAL-508 1517 chr3L 18000655 18000704 chr3L 18000752 18000766 19 94 3.0 4.5 3.8 4.0 111 chr3L 18000655 intron Eip75B - chr3L 18000710 intron Eip75B - chr3L 18000766 intron Eip75B - chr3L_19_18000001 chr3L_18000001 RAL-508 1518 chr3L 18047686 18047738 chr3L 18056762 18056815 roo 6 9076 2.5 1.0 1.8 2.1 9129 chr3L 18047686 intron Eip75B - chr3L 18052250 intron Eip75B - chr3L 18056815 intron Eip75B - chr3L_6_18050001 chr3L_18050001 RAL-508 1519 chr3L 18150298 18150337 chr3L 18150414 18150454 8 117 3.0 1.5 2.2 2.5 156 chr3L 18150298 intron CG7330 + chr3L 18150376 intron CG7330 + chr3L 18150454 intron CG7330 + chr3L_8_18150001 chr3L_18150001 RAL-508 1520 chr3L 18172672 18172699 chr3L 18172767 18172795 6 96 5.0 0.5 2.8 1.6 123 chr3L 18172672 intron W - chr3L 18172734 intron W - chr3L 18172795 intron W - chr3L_6_18170001 chr3L_18170001 RAL-508 1521 chr3L 18248935 18248987 chr3L 18249053 18249096 7 117 2.5 4.5 3.5 1.6 161 chr3L 18248935 intergenic not near genes chr3L 18249016 intergenic not near genes chr3L 18249096 intergenic not near genes chr3L_7_18245001 chr3L_18245001 RAL-508 1522 chr3L 18258837 18258878 chr3L 18258983 18258999 10 143 3.0 4.0 3.5 2.2 162 chr3L 18258837 intergenic not near genes chr3L 18258918 intergenic not near genes chr3L 18258999 intergenic not near genes chr3L_10_18255001 chr3L_18255001 RAL-508 1523 chr3L 18262463 18262479 chr3L 18262566 18262582 7 103 2.0 3.5 2.8 1.8 119 chr3L 18262463 intergenic not near genes chr3L 18262522 intergenic not near genes chr3L 18262582 intergenic not near genes chr3L_7_18260001 chr3L_18260001 RAL-508 1524 chr3L 18279763 18279815 chr3L 18279859 18279910 12 95 2.0 3.5 2.8 3.2 147 chr3L 18279763 intergenic not near genes chr3L 18279836 intergenic not near genes chr3L 18279910 intergenic not near genes chr3L_12_18275001 chr3L_18275001 RAL-508 1525 chr3L 18301335 18301370 chr3L 18301444 18301479 4 109 1.0 2.0 1.5 1.6 144 chr3L 18301335 intergenic CG13700 - chr3L 18301407 intergenic CG13700 - chr3L 18301479 intergenic CG13700 - chr3L_4_18300001 chr3L_18300001 RAL-508 1526 chr3L 18374583 18374616 chr3L 18374696 18374729 5 112 5.0 6.0 5.5 0.8 146 chr3L 18374583 intergenic not near genes chr3L 18374656 intergenic not near genes chr3L 18374729 intergenic not near genes chr3L_5_18370001 chr3L_18370001 RAL-508 1527 chr3L 18420075 18420098 chr3L 18420148 18420202 7 99 1.5 4.0 2.8 1.8 127 chr3L 18420075 intergenic not near genes chr3L 18420138 intergenic not near genes chr3L 18420202 intergenic not near genes chr3L_7_18420001 chr3L_18420001 RAL-508 1528 chr3L 18450573 18450591 chr3L 18450669 18450686 5 95 2.0 1.0 1.5 2.0 113 chr3L 18450573 intergenic not near genes chr3L 18450630 intergenic not near genes chr3L 18450686 intergenic not near genes chr3L_5_18450001 chr3L_18450001 RAL-508 1529 chr3L 18456257 18456275 chr3L 18456360 18456380 4 106 4.0 2.5 3.2 1.0 123 chr3L 18456257 intergenic CR44670 - chr3L 18456318 intergenic CR44670 - chr3L 18456380 intergenic CR44670 - chr3L_4_18455001 chr3L_18455001 RAL-508 1530 chr3L 18506131 18506149 chr3L 18509607 18509630 F-element 8 3481 5.0 2.5 3.8 1.7 3499 chr3L 18506131 intergenic not near genes chr3L 18507880 intergenic not near genes chr3L 18509630 intergenic not near genes chr3L_8_18505001 chr3L_18505001 RAL-508 1531 chr3L 18514887 18514934 chr3L 18520098 18520144 BS 13 5207 5.0 4.5 4.8 2.2 5257 chr3L 18514887 intergenic not near genes chr3L 18517516 intergenic not near genes chr3L 18520144 intergenic not near genes chr3L_13_18515001 chr3L_18515001 RAL-508 1532 chr3L 18528636 18528657 chr3L 18537840 18537861 roo 4 9204 2.5 0.5 1.5 1.6 9225 chr3L 18528636 intergenic not near genes chr3L 18533248 intergenic not near genes chr3L 18537861 intergenic not near genes chr3L_4_18530001 chr3L_18530001 RAL-508 1533 chr3L 18593939 18593959 chr3L 18595939 18595958 Doc 7 2000 6.5 0.0 3.2 1.7 2019 chr3L 18593939 intergenic term - chr3L 18594948 intergenic not near genes chr3L 18595958 intergenic CR45389 + chr3L_7_18590001 chr3L_18590001 RAL-508 1534 chr3L 18638562 18638603 chr3L 18638675 18638717 8 114 1.5 2.5 2.0 2.7 155 chr3L 18638562 intron MYPT-75D + chr3L 18638640 intron MYPT-75D + chr3L 18638717 intron MYPT-75D + chr3L_8_18635001 chr3L_18635001 RAL-508 1535 chr3L 18678537 18678547 chr3L 18678780 18678794 6 247 0.0 9.5 4.8 1.0 257 chr3L 18678537 intergenic not near genes chr3L 18678666 intergenic not near genes chr3L 18678794 intergenic not near genes chr3L_6_18675001 chr3L_18675001 RAL-508 1536 chr3L 18701116 18701154 chr3L 18701224 18701261 10 106 4.0 3.5 3.8 2.1 145 chr3L 18701116 intergenic not near genes chr3L 18701188 intergenic not near genes chr3L 18701261 intergenic not near genes chr3L_10_18700001 chr3L_18700001 RAL-508 1537 chr3L 18710771 18710785 chr3L 18718741 18718754 Stalker2 4 7970 1.5 0.5 1.0 2.0 7983 chr3L 18710771 intergenic not near genes chr3L 18714762 intergenic not near genes chr3L 18718754 intergenic not near genes chr3L_4_18710001 chr3L_18710001 RAL-508 1538 chr3L 18721752 18721801 chr3L 18721863 18721912 18 109 4.0 3.5 3.8 3.8 160 chr3L 18721752 intergenic CG12477 - chr3L 18721832 intergenic CG12477 - chr3L 18721912 3` UTR CG12477 - chr3L_18_18720001 chr3L_18720001 RAL-508 1539 chr3L 18738666 18738698 chr3L 18738774 18738806 11 108 2.0 8.0 5.0 1.8 140 chr3L 18738666 intergenic not near genes chr3L 18738736 intergenic not near genes chr3L 18738806 intergenic not near genes chr3L_11_18735001 chr3L_18735001 RAL-508 1540 chr3L 18739356 18739405 chr3L 18739475 18739524 7 119 2.5 4.0 3.2 1.7 168 chr3L 18739356 intergenic not near genes chr3L 18739440 intergenic not near genes chr3L 18739524 intergenic not near genes chr3L_7_18735001 chr3L_18735001 RAL-508 1541 chr3L 18772389 18772434 chr3L 18781090 18781135 roo 14 8701 3.5 5.5 4.5 2.5 8746 chr3L 18772389 intron ftz-f1 - chr3L 18776762 intron ftz-f1 - chr3L 18781135 intron ftz-f1 - chr3L_14_18775001 chr3L_18775001 RAL-508 1542 chr3L 18784375 18784405 chr3L 18784484 18784514 8 109 2.5 2.0 2.2 2.5 139 chr3L 18784375 intron ftz-f1 - chr3L 18784444 intron ftz-f1 - chr3L 18784514 intron ftz-f1 - chr3L_8_18780001 chr3L_18780001 RAL-508 1543 chr3L 18810131 18810177 chr3L 18810227 18810278 10 101 2.5 0.5 1.5 4.0 147 chr3L 18810131 intron CG14073 - chr3L 18810204 intron CG14073 - chr3L 18810278 intron CG14073 - chr3L_10_18810001 chr3L_18810001 RAL-508 1544 chr3L 18833547 18833581 chr3L 18833653 18833691 16 106 3.5 3.5 3.5 3.6 144 chr3L 18833547 intron Indy - chr3L 18833619 intron Indy - chr3L 18833691 intron Indy - chr3L_16_18830001 chr3L_18830001 RAL-508 1545 chr3L 18833781 18833810 chr3L 18834953 18834982 1360 9 1175 2.5 6.0 4.2 1.7 1201 chr3L 18833781 intron Indy - chr3L 18834382 intron Indy - chr3L 18834982 intron Indy - chr3L_9_18830001 chr3L_18830001 RAL-508 1546 chr3L 18861777 18861781 chr3L 18861863 18861863 4 94 5.0 4.5 4.8 0.7 86 chr3L 18861777 intergenic not near genes chr3L 18861820 intergenic not near genes chr3L 18861863 intergenic not near genes chr3L_4_18860001 chr3L_18860001 RAL-508 1547 chr3L 18861785 18861798 chr3L 18861862 18861885 4 92 2.5 4.0 3.2 1.0 100 chr3L 18861785 intergenic not near genes chr3L 18861835 intergenic not near genes chr3L 18861885 intergenic not near genes chr3L_4_18860001 chr3L_18860001 RAL-508 1548 chr3L 18888438 18888462 chr3L 18888540 18888563 7 102 3.0 1.5 2.2 2.2 125 chr3L 18888438 intron CG3961 - chr3L 18888500 intron CG3961 - chr3L 18888563 intron CG3961 - chr3L_7_18885001 chr3L_18885001 RAL-508 1549 chr3L 18933616 18933650 chr3L 18933723 18933763 7 109 5.0 3.5 4.2 1.3 147 chr3L 18933616 intron CG32204 - chr3L 18933690 intron CG32204 - chr3L 18933763 intron CG32204 - chr3L_7_18930001 chr3L_18930001 RAL-508 1550 chr3L 18935821 18935864 chr3L 18935930 18935973 6 109 0.5 2.0 1.2 2.7 152 chr3L 18935821 intron CG32204 - chr3L 18935897 intron CG32204 - chr3L 18935973 intron CG32204 - chr3L_6_18935001 chr3L_18935001 RAL-508 1551 chr3L 18948867 18948909 chr3L 18949113 18949155 7 243 0.5 3.5 2.0 2.3 288 chr3L 18948867 intergenic not near genes chr3L 18949011 intergenic not near genes chr3L 18949155 intergenic not near genes chr3L_7_18945001 chr3L_18945001 RAL-508 1552 chr3L 18958580 18958617 chr3L 18958676 18958713 6 95 2.0 2.5 2.2 1.9 133 chr3L 18958580 intergenic not near genes chr3L 18958646 intergenic not near genes chr3L 18958713 intergenic not near genes chr3L_6_18955001 chr3L_18955001 RAL-508 1553 chr3L 19008832 19008864 chr3L 19009185 19009218 jockey 5 355 1.5 5.0 3.2 1.2 386 chr3L 19008832 intron nkd - chr3L 19009025 intron nkd - chr3L 19009218 intron nkd - chr3L_5_19005001 chr3L_19005001 RAL-508 1554 chr3L 19029469 19029474 chr3L 19029565 19029584 4 110 2.5 7.5 5.0 0.7 115 chr3L 19029469 intron nkd - chr3L 19029526 intron nkd - chr3L 19029584 intron nkd - chr3L_4_19025001 chr3L_19025001 RAL-508 1555 chr3L 19109557 19109575 chr3L 19109629 19109650 6 85 5.0 3.5 4.2 1.2 93 chr3L 19109557 intron CG14082 - chr3L 19109604 intron CG14082 - chr3L 19109650 intron CG14082 - chr3L_6_19105001 chr3L_19105001 RAL-508 1556 chr3L 19115622 19115665 chr3L 19115819 19115825 BS 9 195 6.5 3.5 5.0 1.5 203 chr3L 19115622 intron CG14082 - chr3L 19115724 intron CG14082 - chr3L 19115825 intron CG14082 - chr3L_9_19115001 chr3L_19115001 RAL-508 1557 chr3L 19117030 19117072 chr3L 19124491 19124539 mdg1 18 7461 7.5 6.0 6.8 2.3 7509 chr3L 19117030 intron CG14082 - chr3L 19120784 intron CG14082 - chr3L 19124539 intron CG14082 - chr3L_18_19120001 chr3L_19120001 RAL-508 1558 chr3L 19135077 19135102 chr3L 19135249 19135274 5 171 8.0 4.0 6.0 0.7 197 chr3L 19135077 intron CG14082 - chr3L 19135176 intron CG14082 - chr3L 19135274 intron CG14082 - chr3L_5_19135001 chr3L_19135001 RAL-508 1559 chr3L 19135103 19135124 chr3L 19135245 19135296 9 165 4.0 4.0 4.0 1.8 193 chr3L 19135103 intron CG14082 - chr3L 19135200 intron CG14082 - chr3L 19135296 intron CG14082 - chr3L_9_19135001 chr3L_19135001 RAL-508 1560 chr3L 19136304 19136349 chr3L 19136409 19136432 10 99 7.0 4.5 5.8 1.5 128 chr3L 19136304 intron CG14082 - chr3L 19136368 intron CG14082 - chr3L 19136432 intron CG14082 - chr3L_10_19135001 chr3L_19135001 RAL-508 1561 chr3L 19182392 19182410 chr3L 19182493 19182511 4 101 3.5 6.0 4.8 0.7 119 chr3L 19182392 intron fz2 - chr3L 19182452 intron fz2 - chr3L 19182511 intron fz2 - chr3L_4_19180001 chr3L_19180001 RAL-508 1562 chr3L 19208044 19208090 chr3L 19209434 19209477 Doc 12 1387 2.0 2.5 2.2 3.8 1433 chr3L 19208044 intron fz2 - chr3L 19208760 intron fz2 - chr3L 19209477 intron fz2 - chr3L_12_19205001 chr3L_19205001 RAL-508 1563 chr3L 19210108 19210137 chr3L 19210224 19210253 6 116 0.0 2.0 1.0 3.0 145 chr3L 19210108 intron fz2 - chr3L 19210180 intron fz2 - chr3L 19210253 intron fz2 - chr3L_6_19210001 chr3L_19210001 RAL-508 1564 chr3L 19216500 19216512 chr3L 19216597 19216609 5 97 5.0 2.5 3.8 1.0 109 chr3L 19216500 intron fz2 - chr3L 19216554 intron fz2 - chr3L 19216609 intron fz2 - chr3L_5_19215001 chr3L_19215001 RAL-508 1565 chr3L 19228390 19228430 chr3L 19228503 19228527 12 111 3.5 4.5 4.0 2.4 137 chr3L 19228390 intron fz2 - chr3L 19228458 intron fz2 - chr3L 19228527 intron fz2 - chr3L_12_19225001 chr3L_19225001 RAL-508 1566 chr3L 19231337 19231376 chr3L 19231444 19231472 11 104 2.0 5.0 3.5 2.4 135 chr3L 19231337 intron fz2 - chr3L 19231404 intron fz2 - chr3L 19231472 intron fz2 - chr3L_11_19230001 chr3L_19230001 RAL-508 1567 chr3L 19232840 19232883 chr3L 19232942 19232977 8 100 6.0 4.0 5.0 1.3 137 chr3L 19232840 intron fz2 - chr3L 19232908 intron fz2 - chr3L 19232977 intron fz2 - chr3L_8_19230001 chr3L_19230001 RAL-508 1568 chr3L 19390705 19390760 chr3L 19390823 19390877 9 114 3.5 4.5 4.0 1.8 172 chr3L 19390705 intron CG32206 - chr3L 19390791 intron CG32206 - chr3L 19390877 intron CG32206 - chr3L_9_19390001 chr3L_19390001 RAL-508 1569 chr3L 19426733 19426776 chr3L 19426831 19426834 7 86 6.0 8.0 7.0 0.9 101 chr3L 19426733 intergenic not near genes chr3L 19426784 intergenic not near genes chr3L 19426834 intergenic not near genes chr3L_7_19425001 chr3L_19425001 RAL-508 1570 chr3L 19439284 19439288 chr3L 19439380 19439394 4 103 1.0 7.0 4.0 0.8 110 chr3L 19439284 intergenic not near genes chr3L 19439339 intergenic not near genes chr3L 19439394 intergenic not near genes chr3L_4_19435001 chr3L_19435001 RAL-508 1571 chr3L 19488491 19488497 chr3L 19488593 19488599 4 102 9.5 3.5 6.5 0.5 108 chr3L 19488491 intergenic pncr009:3L -,CG32212 + chr3L 19488545 intergenic pncr009:3L -,CG32212 + chr3L 19488599 intergenic pncr009:3L -,CG32212 + chr3L_4_19485001 chr3L_19485001 RAL-508 1572 chr3L 19567551 19567597 chr3L 19567653 19567699 10 102 0.5 2.0 1.2 4.5 148 chr3L 19567551 3` UTR Shal - chr3L 19567625 3` UTR Shal - chr3L 19567699 3` UTR Shal - chr3L_10_19565001 chr3L_19565001 RAL-508 1573 chr3L 19636849 19636851 chr3L 19636971 19636973 4 122 11.0 7.0 9.0 0.4 124 chr3L 19636849 intergenic CG8786 - chr3L 19636911 intergenic CG8786 - chr3L 19636973 intergenic CG8786 - chr3L_4_19635001 chr3L_19635001 RAL-508 1574 chr3L 19695408 19695457 chr3L 19695507 19695553 11 95 4.0 6.0 5.0 1.8 145 chr3L 19695408 intergenic verm - chr3L 19695480 intergenic verm - chr3L 19695553 intergenic verm - chr3L_11_19695001 chr3L_19695001 RAL-508 1575 chr3L 19820283 19820318 chr3L 19827852 19827887 412 9 7569 1.0 3.5 2.2 2.8 7604 chr3L 19820283 intron Deaf1 + chr3L 19824085 intron Deaf1 + chr3L 19827887 intron Deaf1 + chr3L_9_19820001 chr3L_19820001 RAL-508 1576 chr3L 19848492 19848523 chr3L 19857702 19857733 roo 9 9209 4.5 5.0 4.8 1.6 9241 chr3L 19848492 intron Papss + chr3L 19853112 intron Papss + chr3L 19857733 intron Papss + chr3L_9_19850001 chr3L_19850001 RAL-508 1577 chr3L 19861808 19861819 chr3L 19863616 19863626 S-element 8 1807 9.5 3.0 6.2 1.1 1818 chr3L 19861808 5` UTR CR45433 + chr3L 19862717 intergenic not near genes chr3L 19863626 intergenic not near genes chr3L_8_19860001 chr3L_19860001 RAL-508 1578 chr3L 19861822 19861850 chr3L 19863612 19863641 S-element 6 1802 4.5 3.0 3.8 1.2 1819 chr3L 19861822 5` UTR CR45433 + chr3L 19862732 intergenic not near genes chr3L 19863641 intergenic not near genes chr3L_6_19860001 chr3L_19860001 RAL-508 1579 chr3L 19933525 19933561 chr3L 19934359 19934402 15 841 4.0 2.5 3.2 3.6 877 chr3L 19933525 intergenic CR45678 + chr3L 19933964 5` UTR CR45678 + chr3L 19934402 intergenic CR45678 + chr3L_15_19930001 chr3L_19930001 RAL-508 1580 chr3L 19981183 19981236 chr3L 19981283 19981336 13 99 2.0 0.5 1.2 5.9 153 chr3L 19981183 intergenic not near genes chr3L 19981260 intergenic CG17732 + chr3L 19981336 intergenic CG17732 + chr3L_13_19980001 chr3L_19980001 RAL-508 1581 chr3L 20057547 20057583 chr3L 20057680 20057716 12 131 7.0 6.5 6.8 1.5 169 chr3L 20057547 intergenic not near genes chr3L 20057632 intergenic not near genes chr3L 20057716 intergenic not near genes chr3L_12_20055001 chr3L_20055001 RAL-508 1582 chr3L 20081728 20081740 chr3L 20081831 20081843 5 103 5.0 3.0 4.0 1.0 115 chr3L 20081728 intron sNPF-R - chr3L 20081786 intron sNPF-R - chr3L 20081843 intron sNPF-R - chr3L_5_20080001 chr3L_20080001 RAL-508 1583 chr3L 20081748 20081767 chr3L 20081830 20081870 6 100 3.0 3.0 3.0 1.5 122 chr3L 20081748 intron sNPF-R - chr3L 20081809 intron sNPF-R - chr3L 20081870 intron sNPF-R - chr3L_6_20080001 chr3L_20080001 RAL-508 1584 chr3L 20096242 20096284 chr3L 20096370 20096412 8 128 3.5 2.0 2.8 2.1 170 chr3L 20096242 intergenic not near genes chr3L 20096327 intergenic not near genes chr3L 20096412 intergenic not near genes chr3L_8_20095001 chr3L_20095001 RAL-508 1585 chr3L 20157947 20157983 chr3L 20158065 20158101 7 116 7.5 0.5 4.0 1.4 154 chr3L 20157947 intron CG42674 - chr3L 20158024 intron CG42674 - chr3L 20158101 intron CG42674 - chr3L_7_20155001 chr3L_20155001 RAL-508 1586 chr3L 20257326 20257359 chr3L 20258457 20258499 pogo 10 1135 5.0 5.0 5.0 1.7 1173 chr3L 20257326 intron rdgC + chr3L 20257912 intron rdgC + chr3L 20258499 intron rdgC + chr3L_10_20255001 chr3L_20255001 RAL-508 1587 chr3L 20321100 20321124 chr3L 20342900 20342910 17.6 4 21790 9.0 18.5 13.8 0.3 21810 chr3L 20321100 exon Spn77Bb + chr3L 20332005 intergenic not near genes chr3L 20342910 exon Spn77Bc + chr3L_4_20330001 chr3L_20330001 RAL-508 1588 chr3L 20422993 20423039 chr3L 20423228 20423274 13 226 7.0 1.5 4.2 2.5 281 chr3L 20422993 exon zye + chr3L 20423134 exon zye + chr3L 20423274 exon zye + chr3L_13_20420001 chr3L_20420001 RAL-508 1589 chr3L 20476735 20476784 chr3L 20484354 20484403 springer 15 7618 3.0 4.0 3.5 3.3 7668 chr3L 20476735 3` UTR isoQC + chr3L 20480569 intergenic not near genes chr3L 20484403 3` UTR ZnT77C - chr3L_15_20480001 chr3L_20480001 RAL-508 1590 chr3L 20710755 20710781 chr3L 20710852 20710878 7 95 4.0 2.5 3.2 1.7 123 chr3L 20710755 intergenic not near genes chr3L 20710816 intergenic not near genes chr3L 20710878 intergenic not near genes chr3L_7_20710001 chr3L_20710001 RAL-508 1591 chr3L 20821273 20821311 chr3L 20824762 20824800 NOF 10 3487 3.0 4.0 3.5 2.2 3527 chr3L 20821273 intron Pka-R1 + chr3L 20823036 intron Pka-R1 + chr3L 20824800 intron Pka-R1 + chr3L_10_20820001 chr3L_20820001 RAL-508 1592 chr3L 20849251 20849293 chr3L 20849350 20849392 13 98 6.5 3.0 4.8 2.2 141 chr3L 20849251 intron CG32432 - chr3L 20849322 intron CG32432 - chr3L 20849392 intron CG32432 - chr3L_13_20845001 chr3L_20845001 RAL-508 1593 chr3L 20872562 20872599 chr3L 20872696 20872734 5 135 2.5 2.5 2.5 1.4 172 chr3L 20872562 intron CG32432 - chr3L 20872648 intron CG32432 - chr3L 20872734 intron CG32432 - chr3L_5_20870001 chr3L_20870001 RAL-508 1594 chr3L 20890507 20890524 chr3L 20890571 20890578 5 68 6.0 6.0 6.0 0.7 71 chr3L 20890507 intergenic not near genes chr3L 20890542 intergenic not near genes chr3L 20890578 intergenic not near genes chr3L_5_20890001 chr3L_20890001 RAL-508 1595 chr3L 20890890 20890932 chr3L 20891014 20891052 6 123 6.0 4.0 5.0 1.0 162 chr3L 20890890 intergenic not near genes chr3L 20890971 intergenic not near genes chr3L 20891052 intergenic not near genes chr3L_6_20890001 chr3L_20890001 RAL-508 1596 chr3L 20913749 20913780 chr3L 20913833 20913860 9 90 2.0 5.0 3.5 2.0 111 chr3L 20913749 intergenic CR43930 - chr3L 20913804 intergenic CR43930 - chr3L 20913860 intergenic CR43930 - chr3L_9_20910001 chr3L_20910001 RAL-508 1597 chr3L 20917072 20917119 chr3L 20917169 20917204 20 92 4.0 9.0 6.5 2.7 132 chr3L 20917072 intergenic not near genes chr3L 20917138 intergenic not near genes chr3L 20917204 intergenic not near genes chr3L_20_20915001 chr3L_20915001 RAL-508 1598 chr3L 20948648 20948700 chr3L 20948759 20948811 17 109 0.5 2.0 1.2 7.7 163 chr3L 20948648 intron fng - chr3L 20948730 intron fng - chr3L 20948811 intron fng - chr3L_17_20945001 chr3L_20945001 RAL-508 1599 chr3L 20979134 20979144 chr3L 20979536 20979537 5 397 9.5 5.5 7.5 0.6 403 chr3L 20979134 intergenic not near genes chr3L 20979336 intergenic not near genes chr3L 20979537 intergenic not near genes chr3L_5_20975001 chr3L_20975001 RAL-508 1600 chr3L 20979145 20979178 chr3L 20979533 20979535 15 394 2.5 5.5 4.0 3.0 390 chr3L 20979145 intergenic not near genes chr3L 20979340 intergenic not near genes chr3L 20979535 intergenic not near genes chr3L_15_20975001 chr3L_20975001 RAL-508 1601 chr3L 20986741 20986791 chr3L 20986838 20986861 11 95 2.5 2.5 2.5 3.1 120 chr3L 20986741 intergenic not near genes chr3L 20986801 intergenic not near genes chr3L 20986861 intergenic not near genes chr3L_11_20985001 chr3L_20985001 RAL-508 1602 chr3L 21014898 21014946 chr3L 21023398 21023426 Tirant 9 8494 2.0 3.5 2.8 2.4 8528 chr3L 21014898 intron skd - chr3L 21019162 intron skd - chr3L 21023426 intron skd - chr3L_9_21015001 chr3L_21015001 RAL-508 1603 chr3L 21110161 21110211 chr3L 21110435 21110485 23 273 4.0 4.5 4.2 4.4 324 chr3L 21110161 intron ko - chr3L 21110323 intron ko - chr3L 21110485 intron ko - chr3L_23_21110001 chr3L_21110001 RAL-508 1604 chr3L 21151845 21151887 chr3L 21156949 21156992 flea 5 5104 3.5 0.5 2.0 1.7 5147 chr3L 21151845 intron Ac78C - chr3L 21154418 intron Ac78C - chr3L 21156992 intron Ac78C - chr3L_5_21150001 chr3L_21150001 RAL-508 1605 chr3L 21158575 21158620 chr3L 21158671 21158694 13 86 4.5 3.5 4.0 2.6 119 chr3L 21158575 intron Ac78C - chr3L 21158634 intron Ac78C - chr3L 21158694 intron Ac78C - chr3L_13_21155001 chr3L_21155001 RAL-508 1606 chr3L 21172816 21172868 chr3L 21172936 21172967 6 118 4.5 5.5 5.0 1.0 151 chr3L 21172816 intergenic chb +,asparagine-synthetase + chr3L 21172892 5` UTR chb + chr3L 21172967 5` UTR chb + chr3L_6_21170001 chr3L_21170001 RAL-508 1607 chr3L 21186039 21186071 chr3L 21186127 21186156 5 88 11.0 6.0 8.5 0.5 117 chr3L 21186039 intron CG42337 - chr3L 21186098 intron CG42337 - chr3L 21186156 intron CG42337 - chr3L_5_21185001 chr3L_21185001 RAL-508 1608 chr3L 21256524 21256564 chr3L 21256624 21256649 9 95 4.0 3.0 3.5 2.0 125 chr3L 21256524 intron Eip78C + chr3L 21256586 intron Eip78C + chr3L 21256649 intron Eip78C + chr3L_9_21255001 chr3L_21255001 RAL-508 1609 chr3L 21303693 21303736 chr3L 21303800 21303830 9 105 1.0 5.0 3.0 2.2 137 chr3L 21303693 intron CG11309 - chr3L 21303762 intron CG11309 - chr3L 21303830 intron CG11309 - chr3L_9_21300001 chr3L_21300001 RAL-508 1610 chr3L 21306132 21306180 chr3L 21315309 21315359 roo 16 9178 2.5 1.5 2.0 5.3 9227 chr3L 21306132 3` UTR CG7632 + chr3L 21310746 intron Pc - chr3L 21315359 3` UTR Pc - chr3L_16_21310001 chr3L_21310001 RAL-508 1611 chr3L 21361706 21361748 chr3L 21362680 21362722 G2 13 972 3.5 3.5 3.5 2.9 1016 chr3L 21361706 intergenic CG32440 + chr3L 21362214 intergenic not near genes chr3L 21362722 intergenic not near genes chr3L_13_21360001 chr3L_21360001 RAL-508 1612 chr3L 21406983 21407027 chr3L 21407082 21407126 22 97 5.0 5.0 5.0 3.7 143 chr3L 21406983 intron rgn + chr3L 21407054 intron rgn + chr3L 21407126 intron rgn + chr3L_22_21405001 chr3L_21405001 RAL-508 1613 chr3L 21414525 21414542 chr3L 21414618 21414636 6 94 2.0 2.0 2.0 2.0 111 chr3L 21414525 intron rgn + chr3L 21414580 intron rgn + chr3L 21414636 intron rgn + chr3L_6_21410001 chr3L_21410001 RAL-508 1614 chr3L 21437586 21437631 chr3L 21437713 21437756 8 126 1.5 3.5 2.5 2.3 170 chr3L 21437586 3` UTR Aef1 + chr3L 21437671 3` UTR Aef1 + chr3L 21437756 3` UTR Aef1 + chr3L_8_21435001 chr3L_21435001 RAL-508 1615 chr3L 21498834 21498862 chr3L 21500481 21500517 1360 4 1653 5.0 8.0 6.5 0.5 1683 chr3L 21498834 intron Glg1 - chr3L 21499676 intron Glg1 - chr3L 21500517 intron Glg1 - chr3L_4_21495001 chr3L_21495001 RAL-508 1616 chr3L 21501152 21501171 chr3L 21501266 21501281 1360 5 113 2.5 7.0 4.8 0.9 129 chr3L 21501152 intron Glg1 - chr3L 21501216 intron Glg1 - chr3L 21501281 intron Glg1 - chr3L_5_21500001 chr3L_21500001 RAL-508 1617 chr3L 21509642 21509653 chr3L 21509739 21509750 4 97 7.5 7.5 7.5 0.5 108 chr3L 21509642 intron M6 + chr3L 21509696 intron M6 + chr3L 21509750 intron M6 + chr3L_4_21505001 chr3L_21505001 RAL-508 1618 chr3L 21509663 21509687 chr3L 21509730 21509784 14 87 6.0 9.0 7.5 1.6 121 chr3L 21509663 intron M6 + chr3L 21509724 intron M6 + chr3L 21509784 intron M6 + chr3L_14_21505001 chr3L_21505001 RAL-508 1619 chr3L 21637303 21637345 chr3L 21637410 21637452 8 104 5.5 4.5 5.0 1.3 149 chr3L 21637303 exon CG32444 + chr3L 21637378 intron CG32444 + chr3L 21637452 intron CG32444 + chr3L_8_21635001 chr3L_21635001 RAL-508 1620 chr3L 21649756 21649804 chr3L 21650000 21650048 15 244 1.0 5.5 3.2 3.6 292 chr3L 21649756 intron CG43980 + chr3L 21649902 intron CG43980 + chr3L 21650048 intron CG43980 + chr3L_15_21645001 chr3L_21645001 RAL-508 1621 chr3L 21671040 21671065 chr3L 21671208 21671233 12 167 5.5 6.0 5.8 1.8 193 chr3L 21671040 intergenic not near genes chr3L 21671136 intergenic not near genes chr3L 21671233 intergenic not near genes chr3L_12_21670001 chr3L_21670001 RAL-508 1622 chr3L 21671066 21671087 chr3L 21671205 21671252 7 161 1.5 5.5 3.5 1.6 186 chr3L 21671066 intergenic not near genes chr3L 21671159 intergenic not near genes chr3L 21671252 intergenic not near genes chr3L_7_21670001 chr3L_21670001 RAL-508 1623 chr3L 21736344 21736360 chr3L 21736545 21736581 5 216 0.5 6.5 3.5 1.1 237 chr3L 21736344 intergenic CR43888 + chr3L 21736462 intergenic CR43888 + chr3L 21736581 intergenic CR43888 + chr3L_5_21735001 chr3L_21735001 RAL-508 1624 chr3L 21749304 21749319 chr3L 21754479 21754497 Doc 5 5178 6.0 5.0 5.5 0.8 5193 chr3L 21749304 intron Syn1 - chr3L 21751900 intron Syn1 - chr3L 21754497 intron Syn1 - chr3L_5_21750001 chr3L_21750001 RAL-508 1625 chr3L 21749320 21749334 chr3L 21754478 21754510 Doc 4 5164 6.0 5.0 5.5 0.6 5190 chr3L 21749320 intron Syn1 - chr3L 21751915 intron Syn1 - chr3L 21754510 intron Syn1 - chr3L_4_21750001 chr3L_21750001 RAL-508 1626 chr3L 21769041 21769065 chr3L 21769148 21769172 5 107 3.5 3.5 3.5 1.1 131 chr3L 21769041 intron,intron Syn1 -,CG42689 + chr3L 21769106 intron,intron Syn1 -,CG42689 + chr3L 21769172 intron,intron Syn1 -,CG42689 + chr3L_5_21765001 chr3L_21765001 RAL-508 1627 chr3L 21770029 21770039 chr3L 21770134 21770146 4 106 5.0 5.0 5.0 0.7 117 chr3L 21770029 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L 21770088 5` UTR,intron,intron Syn1 -,CG42689 +,CG7370 + chr3L 21770146 5` UTR,intron,intron Syn1 -,CG42689 +,CG7370 + chr3L_4_21770001 chr3L_21770001 RAL-508 1628 chr3L 21836710 21836762 chr3L 21836816 21836859 10 104 1.5 4.5 3.0 2.5 149 chr3L 21836710 3` UTR P5CDh1 - chr3L 21836784 3` UTR P5CDh1 - chr3L 21836859 3` UTR P5CDh1 - chr3L_10_21835001 chr3L_21835001 RAL-508 1629 chr3L 21849480 21849533 chr3L 21849582 21849635 13 100 4.5 6.5 5.5 2.0 155 chr3L 21849480 intron mub + chr3L 21849558 intron mub + chr3L 21849635 intron mub + chr3L_13_21845001 chr3L_21845001 RAL-508 1630 chr3L 21852242 21852284 chr3L 21852348 21852384 12 99 4.5 3.0 3.8 2.5 142 chr3L 21852242 intron mub + chr3L 21852313 intron mub + chr3L 21852384 intron mub + chr3L_12_21850001 chr3L_21850001 RAL-508 1631 chr3L 21901006 21901037 chr3L 21901119 21901150 4 106 2.5 5.0 3.8 0.8 144 chr3L 21901006 intron mub + chr3L 21901078 intron mub + chr3L 21901150 intron mub + chr3L_4_21900001 chr3L_21900001 RAL-508 1632 chr3L 21952432 21952484 chr3L 21953195 21953247 transib1 12 760 4.0 4.5 4.2 2.3 815 chr3L 21952432 intergenic not near genes chr3L 21952840 intergenic not near genes chr3L 21953247 intergenic not near genes chr3L_12_21950001 chr3L_21950001 RAL-508 1633 chr3L 22016375 22016399 chr3L 22016483 22016497 6 118 7.5 1.5 4.5 1.1 122 chr3L 22016375 intergenic not near genes chr3L 22016436 intergenic not near genes chr3L 22016497 intergenic not near genes chr3L_6_22015001 chr3L_22015001 RAL-508 1634 chr3L 22033671 22033719 chr3L 22033769 22033817 18 96 4.0 2.0 3.0 4.5 146 chr3L 22033671 intergenic not near genes chr3L 22033744 intergenic not near genes chr3L 22033817 intergenic not near genes chr3L_18_22030001 chr3L_22030001 RAL-508 1635 chr3L 22046168 22046215 chr3L 22046290 22046338 17 121 3.5 7.0 5.2 2.7 170 chr3L 22046168 intron Oct-TyrR + chr3L 22046253 intron Oct-TyrR + chr3L 22046338 intron Oct-TyrR + chr3L_17_22045001 chr3L_22045001 RAL-508 1636 chr3L 22099658 22099705 chr3L 22105864 22105892 3S18 6 6196 4.5 4.0 4.2 1.2 6234 chr3L 22099658 intergenic not near genes chr3L 22102775 intergenic not near genes chr3L 22105892 intergenic not near genes chr3L_6_22100001 chr3L_22100001 RAL-508 1637 chr3L 22124792 22124839 chr3L 22124895 22124942 9 102 5.5 2.5 4.0 1.8 150 chr3L 22124792 intergenic not near genes chr3L 22124867 intergenic not near genes chr3L 22124942 intergenic not near genes chr3L_9_22120001 chr3L_22120001 RAL-508 1638 chr3L 22137523 22137555 chr3L 22137613 22137652 11 95 3.5 3.0 3.2 2.6 129 chr3L 22137523 intron olf413 + chr3L 22137588 intron olf413 + chr3L 22137652 intron olf413 + chr3L_11_22135001 chr3L_22135001 RAL-508 1639 chr3L 22166433 22166446 chr3L 22166531 22166544 6 98 4.5 1.5 3.0 1.5 111 chr3L 22166433 intron olf413 + chr3L 22166488 intron olf413 + chr3L 22166544 intron olf413 + chr3L_6_22165001 chr3L_22165001 RAL-508 1640 chr3L 22166450 22166476 chr3L 22166525 22166541 7 90 2.5 1.5 2.0 2.3 91 chr3L 22166450 intron olf413 + chr3L 22166496 intron olf413 + chr3L 22166541 intron olf413 + chr3L_7_22165001 chr3L_22165001 RAL-508 1641 chr3L 22169434 22169489 chr3L 22169547 22169602 16 110 1.5 3.5 2.5 4.6 168 chr3L 22169434 intron olf413 + chr3L 22169518 intron olf413 + chr3L 22169602 intron olf413 + chr3L_16_22165001 chr3L_22165001 RAL-508 1642 chr3L 22411373 22411391 chr3L 22411447 22411455 5 74 2.5 1.0 1.8 1.8 82 chr3L 22411373 intergenic not near genes chr3L 22411414 intergenic not near genes chr3L 22411455 intergenic not near genes chr3L_5_22410001 chr3L_22410001 RAL-508 1643 chr3L 22447182 22447227 chr3L 22447293 22447338 12 110 3.5 2.0 2.8 3.2 156 chr3L 22447182 intergenic not near genes chr3L 22447260 intergenic not near genes chr3L 22447338 intergenic not near genes chr3L_12_22445001 chr3L_22445001 RAL-508 1644 chr3L 22554403 22554454 chr3L 22554499 22554549 16 96 3.5 6.5 5.0 2.7 146 chr3L 22554403 intergenic not near genes chr3L 22554476 intergenic not near genes chr3L 22554549 intergenic not near genes chr3L_16_22550001 chr3L_22550001 RAL-508 1645 chr3L 22555772 22555788 chr3L 22563242 22563277 blood 4 7482 3.5 1.5 2.5 1.1 7505 chr3L 22555772 intergenic not near genes chr3L 22559524 intergenic not near genes chr3L 22563277 intergenic not near genes chr3L_4_22555001 chr3L_22555001 RAL-508 1646 chr3L 22569561 22569604 chr3L 22569679 22569709 14 113 1.5 4.5 3.0 3.5 148 chr3L 22569561 intergenic not near genes chr3L 22569635 intergenic not near genes chr3L 22569709 intergenic not near genes chr3L_14_22565001 chr3L_22565001 RAL-508 1647 chr3L 22577625 22577640 chr3L 22582401 22582443 Doc 5 4784 4.0 1.5 2.8 1.3 4818 chr3L 22577625 intergenic not near genes chr3L 22580034 intergenic not near genes chr3L 22582443 3` UTR CG14459 - chr3L_5_22580001 chr3L_22580001 RAL-508 1648 chr3L 22617172 22617222 chr3L 22624641 22624661 blood 13 7463 3.0 6.5 4.8 2.2 7489 chr3L 22617172 intron CG14459 - chr3L 22620916 intron CG14459 - chr3L 22624661 intron CG14459 - chr3L_13_22620001 chr3L_22620001 RAL-508 1649 chr3L 22732447 22732494 chr3L 22732548 22732595 19 99 1.5 4.0 2.8 5.0 148 chr3L 22732447 intron CG11367 + chr3L 22732521 intron CG11367 + chr3L 22732595 exon CG11367 + chr3L_19_22730001 chr3L_22730001 RAL-508 1650 chr3L 22756409 22756430 chr3L 22756479 22756527 14 89 4.0 6.0 5.0 2.3 118 chr3L 22756409 intron SPoCk + chr3L 22756468 intron SPoCk + chr3L 22756527 intron SPoCk + chr3L_14_22755001 chr3L_22755001 RAL-508 1651 chr3L 22761370 22761418 chr3L 22766824 22766862 Ivk 20 5452 1.5 5.0 3.2 4.8 5492 chr3L 22761370 intron SPoCk + chr3L 22764116 intron SPoCk + chr3L 22766862 intron SPoCk + chr3L_20_22760001 chr3L_22760001 RAL-508 1652 chr3L 22771655 22771666 chr3L 22771725 22771751 6 84 4.5 6.0 5.2 1.0 96 chr3L 22771655 intron SPoCk + chr3L 22771703 intron SPoCk + chr3L 22771751 intron SPoCk + chr3L_6_22770001 chr3L_22770001 RAL-508 1653 chr3L 22853673 22853722 chr3L 22853778 22853828 14 104 5.5 3.5 4.5 2.5 155 chr3L 22853673 5` UTR CR43426 + chr3L 22853750 5` UTR CR43426 + chr3L 22853828 5` UTR CR43426 + chr3L_14_22850001 chr3L_22850001 RAL-508 1654 chr3L 22865968 22866007 chr3L 22867121 22867160 Doc 11 1153 6.5 8.5 7.5 1.3 1192 chr3L 22865968 intron CG33170 + chr3L 22866564 intron CG33170 + chr3L 22867160 intron CG33170 + chr3L_11_22865001 chr3L_22865001 RAL-508 1655 chr3L 22897177 22897219 chr3L 22897278 22897316 10 99 5.0 4.0 4.5 1.8 139 chr3L 22897177 intergenic not near genes chr3L 22897246 intergenic not near genes chr3L 22897316 intergenic not near genes chr3L_10_22895001 chr3L_22895001 RAL-508 1656 chr3L 19220632 19220637 chr3L 22908066 22908066 5 3687431 21.5 26.0 23.8 0.2 3687434 chr3L 19220632 intron fz2 - chr3L 21064349 intron siz + chr3L 22908066 intergenic not near genes chr3L_5_21060001 chr3L_21060001 RAL-508 1657 chr3L 22908066 22908066 chr3L 24821494 24821495 5 1913428 26.0 11.0 18.5 0.3 1913429 chr3L 22908066 intergenic not near genes chr3L 23864780 intron CG40470 - chr3L 24821495 intergenic not near genes chr3L_5_23860001 chr3L_23860001 RAL-508 1658 chr3L 9102757 9102786 chr3L 22908067 22908067 4 13805298 21.5 26.0 23.8 0.2 13805310 chr3L 9102757 exon bol - chr3L 16005412 exon mRpS31 + chr3L 22908067 intergenic not near genes chr3L_4_16005001 chr3L_16005001 RAL-508 1659 chr3L 22989851 22989890 chr3L 22996844 22996880 297 5 6992 3.0 4.5 3.8 1.0 7029 chr3L 22989851 intergenic not near genes chr3L 22993366 intergenic not near genes chr3L 22996880 intergenic not near genes chr3L_5_22990001 chr3L_22990001 RAL-508 1660 chr3L 23042208 23042255 chr3L 23048981 23049028 gypsy6 14 6769 5.0 4.5 4.8 2.4 6820 chr3L 23042208 intergenic not near genes chr3L 23045618 intergenic not near genes chr3L 23049028 intergenic not near genes chr3L_14_23045001 chr3L_23045001 RAL-508 1661 chr3L 23096054 23096107 chr3L 23096157 23096163 12 97 2.5 3.5 3.0 3.0 109 chr3L 23096054 intergenic not near genes chr3L 23096108 intergenic not near genes chr3L 23096163 intergenic not near genes chr3L_12_23095001 chr3L_23095001 RAL-508 1662 chr3L 23251924 23251973 chr3L 23252056 23252109 15 135 3.5 3.0 3.2 3.6 185 chr3L 23251924 intron nAChRalpha4 + chr3L 23252016 intron nAChRalpha4 + chr3L 23252109 intron nAChRalpha4 + chr3L_15_23250001 chr3L_23250001 RAL-508 1663 chr3L 23288930 23288961 chr3L 23289072 23289109 7 147 2.5 3.5 3.0 1.8 179 chr3L 23288930 intergenic not near genes chr3L 23289020 intergenic not near genes chr3L 23289109 intergenic not near genes chr3L_7_23285001 chr3L_23285001 RAL-508 1664 chr3L 23449677 23449730 chr3L 23449772 23449803 10 85 4.5 4.0 4.2 1.9 126 chr3L 23449677 intergenic not near genes chr3L 23449740 intergenic not near genes chr3L 23449803 intergenic not near genes chr3L_10_23445001 chr3L_23445001 RAL-508 1665 chr3L 23665514 23665529 chr3L 23665624 23665639 gypsy8 5 109 32.5 28.5 30.5 0.2 125 chr3L 23665514 intron AGO3 + chr3L 23665576 intron AGO3 + chr3L 23665639 intron AGO3 + chr3L_5_23665001 chr3L_23665001 RAL-508 1666 chr3L 23848824 23848838 chr3L 23849668 23849682 R1A1-element 6 844 6.0 5.0 5.5 0.9 858 chr3L 23848824 intron CG40470 - chr3L 23849253 intron CG40470 - chr3L 23849682 intron CG40470 - chr3L_6_23845001 chr3L_23845001 RAL-508 1667 chr3L 23854287 23854317 chr3L 23854404 23854419 7 114 5.0 5.5 5.2 1.1 132 chr3L 23854287 intron CG40470 - chr3L 23854353 intron CG40470 - chr3L 23854419 intron CG40470 - chr3L_7_23850001 chr3L_23850001 RAL-508 1668 chr3L 23868801 23868815 chr3L 23869132 23869148 4 332 29.0 24.0 26.5 0.1 347 chr3L 23868801 intron CG40470 - chr3L 23868974 intron CG40470 - chr3L 23869148 intron CG40470 - chr3L_4_23865001 chr3L_23865001 RAL-508 1669 chr3L 24012394 24012418 chr3L 24020753 24020779 roo 6 8360 3.0 4.0 3.5 1.3 8385 chr3L 24012394 intergenic not near genes chr3L 24016586 intergenic not near genes chr3L 24020779 intergenic not near genes chr3L_6_24015001 chr3L_24015001 RAL-508 1670 chr3L 24021266 24021314 chr3L 24022443 24022486 1360 12 1175 2.5 3.0 2.8 3.2 1220 chr3L 24021266 intergenic not near genes chr3L 24021876 intergenic not near genes chr3L 24022486 intergenic not near genes chr3L_12_24020001 chr3L_24020001 RAL-508 1671 chr3L 24036768 24036811 chr3L 24036879 24036922 9 111 5.0 6.5 5.8 1.3 154 chr3L 24036768 intergenic not near genes chr3L 24036845 intergenic not near genes chr3L 24036922 intergenic not near genes chr3L_9_24035001 chr3L_24035001 RAL-508 1672 chr3L 24401543 24401564 chr3L 24401643 24401667 5 102 1.0 3.0 2.0 1.7 124 chr3L 24401543 3` UTR nvd + chr3L 24401605 3` UTR nvd + chr3L 24401667 intergenic nvd + chr3L_5_24400001 chr3L_24400001 RAL-508 1673 chr3L 25106567 25106584 chr3L 25106674 25106687 11 106 9.5 7.0 8.2 1.2 120 chr3L 25106567 intergenic not near genes chr3L 25106627 intergenic not near genes chr3L 25106687 intergenic not near genes chr3L_11_25105001 chr3L_25105001 RAL-508 1674 chr3L 25106586 25106614 chr3L 25106673 25106721 12 104 3.0 7.0 5.0 2.0 135 chr3L 25106586 intergenic not near genes chr3L 25106654 intergenic not near genes chr3L 25106721 intergenic not near genes chr3L_12_25105001 chr3L_25105001 RAL-508 1675 chr3L 25268545 25268586 chr3L 25268646 25268681 9 100 3.0 1.5 2.2 2.8 136 chr3L 25268545 intron CG40467 - chr3L 25268613 intron CG40467 - chr3L 25268681 intron CG40467 - chr3L_9_25265001 chr3L_25265001 RAL-508 1676 chr3L 25513556 25513598 chr3L 25513655 25513697 10 99 3.0 1.5 2.2 3.1 141 chr3L 25513556 intron CG41343 - chr3L 25513626 intron CG41343 - chr3L 25513697 intron CG41343 - chr3L_10_25510001 chr3L_25510001 RAL-508 1677 chr3L 25628488 25628502 chr3L 25633274 25633290 F-element 6 4789 4.5 4.5 4.5 1.1 4802 chr3L 25628488 intron CG41343 - chr3L 25630889 intron CG41343 - chr3L 25633290 intron CG41343 - chr3L_6_25630001 chr3L_25630001 RAL-508 1678 chr3L 25628503 25628525 chr3L 25633270 25633316 F-element 8 4786 3.0 4.0 3.5 1.8 4813 chr3L 25628503 intron CG41343 - chr3L 25630910 intron CG41343 - chr3L 25633316 intron CG41343 - chr3L_8_25630001 chr3L_25630001 RAL-508 1679 chr3L 25886874 25886895 chr3L 25887277 25887318 5 419 1.5 2.5 2.0 1.7 444 chr3L 25886874 intron CG40178 - chr3L 25887096 intron CG40178 - chr3L 25887318 intron CG40178 - chr3L_5_25885001 chr3L_25885001 RAL-508 1680 chr3L 26737979 26738014 chr3L 26738485 26738518 6 505 3.0 5.5 4.2 1.2 539 chr3L 26737979 intergenic not near genes chr3L 26738248 intergenic not near genes chr3L 26738518 intergenic not near genes chr3L_6_26735001 chr3L_26735001 RAL-508 1681 chr3L 27167954 27167983 chr3L 27168071 27168095 15 129 5.5 5.5 5.5 2.3 141 chr3L 27167954 intergenic not near genes chr3L 27168024 intergenic not near genes chr3L 27168095 intergenic not near genes chr3L_15_27165001 chr3L_27165001 RAL-508 1682 chr3L 27368863 27368902 chr3L 27369427 27369467 11 565 7.5 2.0 4.8 1.9 604 chr3L 27368863 intron Dbp80 + chr3L 27369165 intron Dbp80 + chr3L 27369467 intron Dbp80 + chr3L_11_27365001 chr3L_27365001 RAL-508 1683 chr3L 27390673 27390712 chr3L 27390772 27390811 8 96 28.5 26.0 27.2 0.3 138 chr3L 27390673 intron Dbp80 + chr3L 27390742 intron Dbp80 + chr3L 27390811 intron Dbp80 + chr3L_8_27390001 chr3L_27390001 RAL-508 1684 chr3L 27980678 27980724 chr3L 27985495 27985537 Doc 8 4816 4.0 2.0 3.0 2.0 4859 chr3L 27980678 intron CG17514 - chr3L 27983108 intron CG17514 - chr3L 27985537 intron CG17514 - chr3L_8_27980001 chr3L_27980001 RAL-508 1685 chr3R 97110 97111 chr3R 99846 99850 6 2737 12.5 6.0 9.2 0.6 2740 chr3R 97110 intergenic not near genes chr3R 98480 intergenic not near genes chr3R 99850 intergenic not near genes chr3R_6_95001 chr3R_95001 RAL-508 1686 chr3R 1062371 1062405 chr3R 1062549 1062583 4 178 2.0 1.5 1.8 1.4 212 chr3R 1062371 intron CG15831 + chr3R 1062477 intron CG15831 + chr3R 1062583 intron CG15831 + chr3R_4_1060001 chr3R_1060001 RAL-508 1687 chr3R 1850875 1850895 chr3R 1853515 1853540 INE-1 5 2640 1.0 2.5 1.8 1.8 2665 chr3R 1850875 intron CG42623 + chr3R 1852208 intron CG42623 + chr3R 1853540 intron CG42623 + chr3R_5_1850001 chr3R_1850001 RAL-508 1688 chr3R 1939032 1939083 chr3R 1939145 1939197 11 114 1.0 4.0 2.5 3.1 165 chr3R 1939032 intergenic not near genes chr3R 1939114 intergenic not near genes chr3R 1939197 intergenic not near genes chr3R_11_1935001 chr3R_1935001 RAL-508 1689 chr3R 2534148 2534162 chr3R 2541717 2541739 5 7577 15.0 17.0 16.0 0.3 7591 chr3R 2534148 intergenic not near genes chr3R 2537944 intergenic not near genes chr3R 2541739 intergenic not near genes chr3R_5_2535001 chr3R_2535001 RAL-508 1690 chr3R 2859832 2859853 chr3R 2859961 2859982 5 129 4.0 4.0 4.0 1.0 150 chr3R 2859832 intergenic not near genes chr3R 2859907 intergenic not near genes chr3R 2859982 intergenic not near genes chr3R_5_2855001 chr3R_2855001 RAL-508 1691 chr3R 3580986 3581022 chr3R 3581233 3581269 4 247 3.0 0.0 1.5 1.6 283 chr3R 3580986 intron Parp - chr3R 3581128 intron Parp - chr3R 3581269 intron Parp - chr3R_4_3580001 chr3R_3580001 RAL-508 1692 chr3R 3877487 3877505 chr3R 3877616 3877655 7 142 2.5 4.5 3.5 1.6 168 chr3R 3877487 intergenic not near genes chr3R 3877571 intergenic not near genes chr3R 3877655 intergenic not near genes chr3R_7_3875001 chr3R_3875001 RAL-508 1693 chr3R 4105031 4105067 chr3R 4110253 4110291 copia 6 5222 2.0 5.0 3.5 1.3 5260 chr3R 4105031 intergenic not near genes chr3R 4107661 intergenic not near genes chr3R 4110291 intergenic not near genes chr3R_6_4105001 chr3R_4105001 RAL-508 1694 chr3R 4206049 4206102 chr3R 4211644 4211697 mdg3 13 5593 2.0 2.0 2.0 4.3 5648 chr3R 4206049 intron CG14636 - chr3R 4208873 intron CG14636 - chr3R 4211697 intron CG14636 - chr3R_13_4205001 chr3R_4205001 RAL-508 1695 chr3R 4366740 4366781 chr3R 4375143 4375184 roo 12 8403 5.0 4.5 4.8 2.1 8444 chr3R 4366740 3` UTR CG1090 + chr3R 4370962 intergenic not near genes chr3R 4375184 5` UTR CR44922 + chr3R_12_4370001 chr3R_4370001 RAL-508 1696 chr3R 4408395 4408441 chr3R 4412716 4412762 Juan 14 4323 3.0 3.5 3.2 3.3 4367 chr3R 4408395 intron CG32944 - chr3R 4410578 intron CG32944 - chr3R 4412762 intron CG32944 - chr3R_14_4410001 chr3R_4410001 RAL-508 1697 chr3R 4501959 4501993 chr3R 4502053 4502089 13 94 6.0 0.5 3.2 3.1 130 chr3R 4501959 intron CG34357 - chr3R 4502024 intron CG34357 - chr3R 4502089 intron CG34357 - chr3R_13_4500001 chr3R_4500001 RAL-508 1698 chr3R 4545864 4545888 chr3R 4547274 4547287 7 1408 10.0 5.0 7.5 0.8 1423 chr3R 4545864 intron CG34357 - chr3R 4546576 intron CG34357 - chr3R 4547287 intron CG34357 - chr3R_7_4545001 chr3R_4545001 RAL-508 1699 chr3R 4609526 4609577 chr3R 4610710 4610755 1360 24 1182 9.5 6.5 8.0 2.7 1229 chr3R 4609526 intergenic not near genes chr3R 4610140 intergenic not near genes chr3R 4610755 intergenic not near genes chr3R_24_4610001 chr3R_4610001 RAL-508 1700 chr3R 4683157 4683202 chr3R 4684936 4684955 S-element 15 1774 5.5 2.0 3.8 3.1 1798 chr3R 4683157 intron CG43427 + chr3R 4684056 intron CG43427 + chr3R 4684955 intron CG43427 + chr3R_15_4680001 chr3R_4680001 RAL-508 1701 chr3R 4753225 4753268 chr3R 4757547 4757565 F-element 13 4319 4.5 7.0 5.8 1.9 4340 chr3R 4753225 intron,intron atms +,CG44098 - chr3R 4755395 intron,intron atms +,CG44098 - chr3R 4757565 intron,exon atms +,CG44098 - chr3R_13_4755001 chr3R_4755001 RAL-508 1702 chr3R 4759712 4759745 chr3R 4761229 4761262 hopper2 14 1516 2.5 13.5 8.0 1.6 1550 chr3R 4759712 intron,intron atms +,CG44098 - chr3R 4760487 intron,intron atms +,CG44098 - chr3R 4761262 intron,intron atms +,CG44098 - chr3R_14_4760001 chr3R_4760001 RAL-508 1703 chr3R 4769154 4769191 chr3R 4769244 4769267 13 93 1.0 4.0 2.5 3.7 113 chr3R 4769154 intron,intron atms +,CG44098 - chr3R 4769210 intron,intron atms +,CG44098 - chr3R 4769267 intron,intron atms +,CG44098 - chr3R_13_4765001 chr3R_4765001 RAL-508 1704 chr3R 4861573 4861597 chr3R 4861650 4861698 11 90 4.5 4.5 4.5 2.0 125 chr3R 4861573 intron opa + chr3R 4861636 intron opa + chr3R 4861698 intron opa + chr3R_11_4860001 chr3R_4860001 RAL-508 1705 chr3R 4887481 4887500 chr3R 4894862 4894897 rover 4 7387 3.5 7.0 5.2 0.6 7416 chr3R 4887481 intergenic not near genes chr3R 4891189 intergenic not near genes chr3R 4894897 intergenic not near genes chr3R_4_4890001 chr3R_4890001 RAL-508 1706 chr3R 4896274 4896317 chr3R 4896387 4896430 10 113 1.0 1.0 1.0 5.0 156 chr3R 4896274 intergenic CR45580 + chr3R 4896352 intergenic CR45580 + chr3R 4896430 5` UTR CR45580 + chr3R_10_4895001 chr3R_4895001 RAL-508 1707 chr3R 4948363 4948387 chr3R 4949002 4949016 7 639 13.5 21.5 17.5 0.4 653 chr3R 4948363 intergenic snRNA:U1:82Eb -,UbcD6 - chr3R 4948690 intergenic UbcD6 - chr3R 4949016 3` UTR UbcD6 - chr3R_7_4945001 chr3R_4945001 RAL-508 1708 chr3R 4965988 4966034 chr3R 4966100 4966146 11 111 3.0 1.5 2.2 3.4 158 chr3R 4965988 intron CG1124 + chr3R 4966067 intron CG1124 + chr3R 4966146 intron CG1124 + chr3R_11_4965001 chr3R_4965001 RAL-508 1709 chr3R 5000271 5000320 chr3R 5000398 5000447 12 125 2.5 0.5 1.5 4.8 176 chr3R 5000271 intron CG2022 - chr3R 5000359 intron CG2022 - chr3R 5000447 intron CG2022 - chr3R_12_5000001 chr3R_5000001 RAL-508 1710 chr3R 5038723 5038777 chr3R 5038825 5038878 17 100 5.0 4.0 4.5 3.1 155 chr3R 5038723 intergenic not near genes chr3R 5038800 intergenic not near genes chr3R 5038878 intergenic not near genes chr3R_17_5035001 chr3R_5035001 RAL-508 1711 chr3R 5045823 5045878 chr3R 5052945 5052998 HMS-Beagle 9 7122 5.0 2.5 3.8 1.9 7175 chr3R 5045823 3` UTR CR43635 - chr3R 5049410 intergenic not near genes chr3R 5052998 intergenic CR45588 - chr3R_9_5045001 chr3R_5045001 RAL-508 1712 chr3R 5055356 5055394 chr3R 5055585 5055628 10 233 2.5 5.0 3.8 2.1 272 chr3R 5055356 intergenic not near genes chr3R 5055492 intergenic not near genes chr3R 5055628 intergenic not near genes chr3R_10_5055001 chr3R_5055001 RAL-508 1713 chr3R 5067961 5068014 chr3R 5073498 5073551 mdg3 19 5536 4.0 4.5 4.2 3.7 5590 chr3R 5067961 intergenic not near genes chr3R 5070756 intergenic not near genes chr3R 5073551 intergenic not near genes chr3R_19_5070001 chr3R_5070001 RAL-508 1714 chr3R 5236217 5236240 chr3R 5236346 5236388 8 145 2.5 4.0 3.2 1.9 171 chr3R 5236217 3` UTR,3` UTR Mms19 +,rtp - chr3R 5236302 3` UTR rtp - chr3R 5236388 3` UTR rtp - chr3R_8_5235001 chr3R_5235001 RAL-508 1715 chr3R 5250865 5250912 chr3R 5250997 5251042 12 130 3.5 10.5 7.0 1.5 177 chr3R 5250865 intron CG12163 - chr3R 5250954 intron CG12163 - chr3R 5251042 intron CG12163 - chr3R_12_5250001 chr3R_5250001 RAL-508 1716 chr3R 5278073 5278115 chr3R 5278174 5278216 19 99 7.0 8.5 7.8 2.2 143 chr3R 5278073 intron mtd - chr3R 5278144 intron mtd - chr3R 5278216 intron mtd - chr3R_19_5275001 chr3R_5275001 RAL-508 1717 chr3R 5338378 5338422 chr3R 5343575 5343593 Rt1c 13 5193 6.0 6.0 6.0 1.9 5215 chr3R 5338378 intron mtd - chr3R 5340986 intron mtd - chr3R 5343593 intron mtd - chr3R_13_5340001 chr3R_5340001 RAL-508 1718 chr3R 5365321 5365340 chr3R 5367009 5367028 NOF 8 1687 10.0 9.5 9.8 0.7 1707 chr3R 5365321 intron Cerk - chr3R 5366174 intron Cerk - chr3R 5367028 intron Cerk - chr3R_8_5365001 chr3R_5365001 RAL-508 1719 chr3R 5367129 5367176 chr3R 5367275 5367321 14 144 2.0 4.0 3.0 3.5 192 chr3R 5367129 intron Cerk - chr3R 5367225 intron Cerk - chr3R 5367321 intron Cerk - chr3R_14_5365001 chr3R_5365001 RAL-508 1720 chr3R 5385958 5386000 chr3R 5386149 5386166 11 188 3.5 5.0 4.2 2.1 208 chr3R 5385958 intron kkv - chr3R 5386062 intron kkv - chr3R 5386166 intron kkv - chr3R_11_5385001 chr3R_5385001 RAL-508 1721 chr3R 5445942 5445994 chr3R 5452422 5452455 Burdock 13 6477 2.0 6.0 4.0 2.6 6513 chr3R 5445942 intron CG14669 + chr3R 5449198 intron CG14669 + chr3R 5452455 intron CG14669 + chr3R_13_5445001 chr3R_5445001 RAL-508 1722 chr3R 5453334 5453349 chr3R 5453445 5453468 5 120 3.5 6.5 5.0 0.8 134 chr3R 5453334 intron CG14669 + chr3R 5453401 intron CG14669 + chr3R 5453468 intron CG14669 + chr3R_5_5450001 chr3R_5450001 RAL-508 1723 chr3R 5626990 5627041 chr3R 5627126 5627177 10 136 2.0 0.0 1.0 5.0 187 chr3R 5626990 intergenic not near genes chr3R 5627084 intergenic not near genes chr3R 5627177 intergenic not near genes chr3R_10_5625001 chr3R_5625001 RAL-508 1724 chr3R 5662893 5662943 chr3R 5663004 5663051 13 110 2.0 3.5 2.8 3.4 158 chr3R 5662893 intron CG1109 + chr3R 5662972 intron CG1109 + chr3R 5663051 intron CG1109 + chr3R_13_5660001 chr3R_5660001 RAL-508 1725 chr3R 5698091 5698131 chr3R 5698204 5698245 10 110 5.0 6.5 5.8 1.5 154 chr3R 5698091 intron plx + chr3R 5698168 intron plx + chr3R 5698245 intron plx + chr3R_10_5695001 chr3R_5695001 RAL-508 1726 chr3R 5712078 5712115 chr3R 5712174 5712222 7 106 4.0 3.0 3.5 1.6 144 chr3R 5712078 3` UTR plx + chr3R 5712150 3` UTR plx + chr3R 5712222 3` UTR plx + chr3R_7_5710001 chr3R_5710001 RAL-508 1727 chr3R 5726148 5726165 chr3R 5726251 5726268 5 104 3.0 3.5 3.2 1.2 120 chr3R 5726148 intergenic not near genes chr3R 5726208 intergenic not near genes chr3R 5726268 intergenic not near genes chr3R_5_5725001 chr3R_5725001 RAL-508 1728 chr3R 5745994 5746038 chr3R 5746255 5746298 pogo 15 260 2.5 4.0 3.2 3.6 304 chr3R 5745994 3` UTR Madm + chr3R 5746146 3` UTR Madm + chr3R 5746298 3` UTR Madm + chr3R_15_5745001 chr3R_5745001 RAL-508 1729 chr3R 5747004 5747043 chr3R 5753215 5753254 diver 5 6211 2.0 2.0 2.0 1.7 6250 chr3R 5747004 intergenic Madm + chr3R 5750129 intergenic not near genes chr3R 5753254 intergenic CG2091 - chr3R_5_5750001 chr3R_5750001 RAL-508 1730 chr3R 5809094 5809144 chr3R 5809355 5809405 pogo 15 260 3.5 5.0 4.2 2.9 311 chr3R 5809094 3` UTR CG11000 + chr3R 5809250 3` UTR CG11000 + chr3R 5809405 3` UTR CG11000 + chr3R_15_5805001 chr3R_5805001 RAL-508 1731 chr3R 5822362 5822412 chr3R 5823549 5823577 1360 13 1185 5.0 6.5 5.8 1.9 1215 chr3R 5822362 3` UTR CG2023 - chr3R 5822970 3` UTR CG2023 - chr3R 5823577 3` UTR CG2023 - chr3R_13_5820001 chr3R_5820001 RAL-508 1732 chr3R 5846874 5846908 chr3R 5846969 5847003 4 96 3.0 0.5 1.8 1.4 129 chr3R 5846874 intergenic CG1213 +,CG14676 + chr3R 5846938 intergenic CG14676 +,CG1213 + chr3R 5847003 intergenic CG14676 +,CG1213 + chr3R_4_5845001 chr3R_5845001 RAL-508 1733 chr3R 5896953 5896988 chr3R 5897324 5897363 9 373 4.0 1.5 2.8 2.4 410 chr3R 5896953 intron CG34113 - chr3R 5897158 intron CG34113 - chr3R 5897363 intron CG34113 - chr3R_9_5895001 chr3R_5895001 RAL-508 1734 chr3R 5927565 5927579 chr3R 5927811 5927839 pogo 11 257 2.5 3.0 2.8 2.9 274 chr3R 5927565 intron CG34113 - chr3R 5927702 intron CG34113 - chr3R 5927839 intron CG34113 - chr3R_11_5925001 chr3R_5925001 RAL-508 1735 chr3R 6015571 6015581 chr3R 6015668 6015678 4 96 0.5 14.0 7.2 0.5 107 chr3R 6015571 intergenic not near genes chr3R 6015624 intergenic not near genes chr3R 6015678 intergenic not near genes chr3R_4_6015001 chr3R_6015001 RAL-508 1736 chr3R 6035125 6035177 chr3R 6035225 6035277 26 97 5.5 5.5 5.5 4.0 152 chr3R 6035125 intergenic not near genes chr3R 6035201 intergenic not near genes chr3R 6035277 intergenic not near genes chr3R_26_6035001 chr3R_6035001 RAL-508 1737 chr3R 6036816 6036818 chr3R 6036888 6036891 5 79 4.0 3.0 3.5 1.1 75 chr3R 6036816 intergenic not near genes chr3R 6036854 intergenic not near genes chr3R 6036891 intergenic not near genes chr3R_5_6035001 chr3R_6035001 RAL-508 1738 chr3R 6062132 6062184 chr3R 6062269 6062295 15 135 1.0 3.5 2.2 4.7 163 chr3R 6062132 intergenic not near genes chr3R 6062214 intergenic not near genes chr3R 6062295 intergenic not near genes chr3R_15_6060001 chr3R_6060001 RAL-508 1739 chr3R 6101298 6101337 chr3R 6101403 6101442 5 94 3.5 3.0 3.2 1.2 144 chr3R 6101298 intergenic Gasp - chr3R 6101370 intergenic Gasp - chr3R 6101442 intergenic not near genes chr3R_5_6100001 chr3R_6100001 RAL-508 1740 chr3R 6158504 6158539 chr3R 6167097 6167119 Tirant 6 8595 8.5 3.5 6.0 0.9 8615 chr3R 6158504 intergenic not near genes chr3R 6162812 intergenic not near genes chr3R 6167119 intergenic CG1077 + chr3R_6_6160001 chr3R_6160001 RAL-508 1741 chr3R 6175153 6175202 chr3R 6182445 6182494 HMS-Beagle2 11 7291 2.5 3.5 3.0 2.8 7341 chr3R 6175153 intergenic Osi1 + chr3R 6178824 intron CR45194 + chr3R 6182494 intergenic CR45194 + chr3R_11_6175001 chr3R_6175001 RAL-508 1742 chr3R 6206275 6206282 chr3R 6206507 6206519 BS 4 236 13.5 7.5 10.5 0.3 244 chr3R 6206275 exon Osi24 + chr3R 6206397 intron Osi24 + chr3R 6206519 intron Osi24 + chr3R_4_6205001 chr3R_6205001 RAL-508 1743 chr3R 6206285 6206319 chr3R 6206501 6206535 BS 12 231 5.5 6.5 6.0 1.7 250 chr3R 6206285 exon Osi24 + chr3R 6206410 intron Osi24 + chr3R 6206535 intron Osi24 + chr3R_12_6205001 chr3R_6205001 RAL-508 1744 chr3R 6283289 6283324 chr3R 6283397 6283431 5 107 1.5 1.0 1.2 2.3 142 chr3R 6283289 intergenic not near genes chr3R 6283360 intergenic not near genes chr3R 6283431 intergenic not near genes chr3R_5_6280001 chr3R_6280001 RAL-508 1745 chr3R 6361384 6361424 chr3R 6361500 6361538 6 114 3.5 1.0 2.2 1.9 154 chr3R 6361384 3` UTR Pak + chr3R 6361461 3` UTR Pak + chr3R 6361538 3` UTR Pak + chr3R_6_6360001 chr3R_6360001 RAL-508 1746 chr3R 6427356 6427395 chr3R 6427660 6427700 11 304 3.5 5.0 4.2 2.1 344 chr3R 6427356 intron gpp + chr3R 6427528 intron gpp + chr3R 6427700 intron gpp + chr3R_11_6425001 chr3R_6425001 RAL-508 1747 chr3R 6484044 6484090 chr3R 6484157 6484203 12 112 4.0 6.0 5.0 2.0 159 chr3R 6484044 intron CG15186 + chr3R 6484124 intron CG15186 + chr3R 6484203 intron CG15186 + chr3R_12_6480001 chr3R_6480001 RAL-508 1748 chr3R 6496641 6496681 chr3R 6496746 6496787 14 107 7.0 5.0 6.0 2.0 146 chr3R 6496641 intergenic not near genes chr3R 6496714 intergenic not near genes chr3R 6496787 intergenic not near genes chr3R_14_6495001 chr3R_6495001 RAL-508 1749 chr3R 6510011 6510048 chr3R 6515112 6515146 jockey 9 5100 5.0 3.0 4.0 1.8 5135 chr3R 6510011 intergenic not near genes chr3R 6512578 intergenic not near genes chr3R 6515146 intergenic not near genes chr3R_9_6510001 chr3R_6510001 RAL-508 1750 chr3R 6598353 6598391 chr3R 6598761 6598810 9 417 1.5 4.0 2.8 2.4 457 chr3R 6598353 intergenic CG1138 - chr3R 6598582 intergenic not near genes chr3R 6598810 intergenic not near genes chr3R_9_6595001 chr3R_6595001 RAL-508 1751 chr3R 6624239 6624282 chr3R 6624340 6624384 8 102 1.0 0.5 0.8 4.4 145 chr3R 6624239 intergenic not near genes chr3R 6624312 intergenic not near genes chr3R 6624384 intergenic not near genes chr3R_8_6620001 chr3R_6620001 RAL-508 1752 chr3R 6635965 6635978 chr3R 6636061 6636074 4 96 7.5 1.5 4.5 0.7 109 chr3R 6635965 intergenic not near genes chr3R 6636020 intergenic not near genes chr3R 6636074 intergenic not near genes chr3R_4_6635001 chr3R_6635001 RAL-508 1753 chr3R 6689323 6689352 chr3R 6689422 6689454 4 101 6.0 3.0 4.5 0.7 131 chr3R 6689323 intergenic Ccp84Af - chr3R 6689388 intergenic Ccp84Af - chr3R 6689454 intergenic Ccp84Af - chr3R_4_6685001 chr3R_6685001 RAL-508 1754 chr3R 6689353 6689370 chr3R 6689420 6689472 6 86 3.5 3.0 3.2 1.4 119 chr3R 6689353 intergenic Ccp84Af - chr3R 6689412 intergenic Ccp84Af - chr3R 6689472 intergenic Ccp84Af - chr3R_6_6685001 chr3R_6685001 RAL-508 1755 chr3R 6705670 6705706 chr3R 6705910 6705949 10 243 0.5 2.5 1.5 4.0 279 chr3R 6705670 intergenic not near genes chr3R 6705810 intergenic not near genes chr3R 6705949 intergenic not near genes chr3R_10_6705001 chr3R_6705001 RAL-508 1756 chr3R 6737486 6737507 chr3R 6739293 6739311 Doc 4 1804 4.5 4.0 4.2 0.8 1825 chr3R 6737486 intron pb - chr3R 6738398 intron pb - chr3R 6739311 intron pb - chr3R_4_6735001 chr3R_6735001 RAL-508 1757 chr3R 6737508 6737525 chr3R 6739285 6739329 Doc 6 1790 2.0 3.0 2.5 1.7 1821 chr3R 6737508 intron pb - chr3R 6738418 intron pb - chr3R 6739329 intron pb - chr3R_6_6735001 chr3R_6735001 RAL-508 1758 chr3R 6777618 6777665 chr3R 6777737 6777786 13 121 2.0 2.5 2.2 4.1 168 chr3R 6777618 intron CR42721 + chr3R 6777702 intron CR42721 + chr3R 6777786 intron CR42721 + chr3R_13_6775001 chr3R_6775001 RAL-508 1759 chr3R 6781656 6781696 chr3R 6781897 6781933 15 240 4.5 5.0 4.8 2.6 277 chr3R 6781656 intergenic not near genes chr3R 6781794 intergenic not near genes chr3R 6781933 intergenic not near genes chr3R_15_6780001 chr3R_6780001 RAL-508 1760 chr3R 6784225 6784269 chr3R 6784370 6784415 12 145 2.0 1.5 1.8 4.3 190 chr3R 6784225 intergenic not near genes chr3R 6784320 intergenic not near genes chr3R 6784415 intergenic not near genes chr3R_12_6780001 chr3R_6780001 RAL-508 1761 chr3R 6799820 6799851 chr3R 6799918 6799949 9 97 4.5 0.0 2.2 2.8 129 chr3R 6799820 intron Dfd + chr3R 6799884 intron Dfd + chr3R 6799949 intron Dfd + chr3R_9_6795001 chr3R_6795001 RAL-508 1762 chr3R 6807579 6807629 chr3R 6807898 6807948 10 316 2.0 4.0 3.0 2.5 369 chr3R 6807579 intergenic not near genes chr3R 6807764 intergenic not near genes chr3R 6807948 intergenic not near genes chr3R_10_6805001 chr3R_6805001 RAL-508 1763 chr3R 6819618 6819655 chr3R 6819722 6819759 8 104 1.0 4.0 2.5 2.3 141 chr3R 6819618 intergenic not near genes chr3R 6819688 intergenic 7SLRNA:CR32864 -,7SLRNA:CR42652 - chr3R 6819759 intergenic 7SLRNA:CR32864 -,7SLRNA:CR42652 - chr3R_8_6815001 chr3R_6815001 RAL-508 1764 chr3R 6828014 6828034 chr3R 6828110 6828129 9 96 2.5 1.5 2.0 3.0 115 chr3R 6828014 intron Scr - chr3R 6828072 intron Scr - chr3R 6828129 intron Scr - chr3R_9_6825001 chr3R_6825001 RAL-508 1765 chr3R 6891218 6891270 chr3R 6891313 6891365 5 82 4.0 1.5 2.8 1.3 147 chr3R 6891218 intergenic not near genes chr3R 6891292 intergenic not near genes chr3R 6891365 intergenic not near genes chr3R_5_6890001 chr3R_6890001 RAL-508 1766 chr3R 6905937 6905972 chr3R 6906018 6906070 10 94 3.0 2.0 2.5 2.9 133 chr3R 6905937 intron Antp - chr3R 6906004 intron Antp - chr3R 6906070 intron Antp - chr3R_10_6905001 chr3R_6905001 RAL-508 1767 chr3R 6933213 6933243 chr3R 6933450 6933480 4 237 2.5 1.0 1.8 1.4 267 chr3R 6933213 intron Antp - chr3R 6933346 intron Antp - chr3R 6933480 intron Antp - chr3R_4_6930001 chr3R_6930001 RAL-508 1768 chr3R 6969763 6969812 chr3R 6969860 6969889 18 94 4.0 1.0 2.5 5.1 126 chr3R 6969763 intron Antp - chr3R 6969826 intron Antp - chr3R 6969889 intron Antp - chr3R_18_6965001 chr3R_6965001 RAL-508 1769 chr3R 6981928 6981980 chr3R 6982037 6982088 13 105 5.5 5.0 5.2 2.1 160 chr3R 6981928 intron Antp - chr3R 6982008 intron Antp - chr3R 6982088 intron Antp - chr3R_13_6980001 chr3R_6980001 RAL-508 1770 chr3R 7030681 7030726 chr3R 7030777 7030822 7 95 4.0 2.0 3.0 1.8 141 chr3R 7030681 intergenic not near genes chr3R 7030752 intergenic not near genes chr3R 7030822 intergenic not near genes chr3R_7_7030001 chr3R_7030001 RAL-508 1771 chr3R 7049528 7049576 chr3R 7049632 7049679 14 104 1.5 4.0 2.8 3.7 151 chr3R 7049528 intergenic not near genes chr3R 7049604 intergenic not near genes chr3R 7049679 intergenic not near genes chr3R_14_7045001 chr3R_7045001 RAL-508 1772 chr3R 7060242 7060283 chr3R 7060336 7060384 7 100 5.0 2.0 3.5 1.6 142 chr3R 7060242 3` UTR dj + chr3R 7060313 3` UTR dj + chr3R 7060384 3` UTR dj + chr3R_7_7060001 chr3R_7060001 RAL-508 1773 chr3R 7076419 7076468 chr3R 7076527 7076577 13 108 3.0 3.0 3.0 3.2 158 chr3R 7076419 intron CG1943 + chr3R 7076498 intron CG1943 + chr3R 7076577 intron CG1943 + chr3R_13_7075001 chr3R_7075001 RAL-508 1774 chr3R 7103911 7103962 chr3R 7104029 7104081 24 118 5.0 4.5 4.8 4.1 170 chr3R 7103911 intron Alh - chr3R 7103996 intron Alh - chr3R 7104081 intron Alh - chr3R_24_7100001 chr3R_7100001 RAL-508 1775 chr3R 7121733 7121877 chr3R 7121831 7122000 5 114 0.5 0.5 0.5 3.3 267 chr3R 7121733 exon Alh - chr3R 7121866 intron Alh - chr3R 7122000 intron Alh - chr3R_5_7120001 chr3R_7120001 RAL-508 1776 chr3R 7173678 7173703 chr3R 7173778 7173803 6 99 2.5 1.5 2.0 2.0 125 chr3R 7173678 intron sas + chr3R 7173740 intron sas + chr3R 7173803 intron sas + chr3R_6_7170001 chr3R_7170001 RAL-508 1777 chr3R 7175985 7176011 chr3R 7176114 7176130 7 130 7.5 2.0 4.8 1.2 145 chr3R 7175985 intron sas + chr3R 7176058 intron sas + chr3R 7176130 intron sas + chr3R_7_7175001 chr3R_7175001 RAL-508 1778 chr3R 7213255 7213297 chr3R 7213350 7213380 14 89 5.0 8.0 6.5 1.9 125 chr3R 7213255 intergenic not near genes chr3R 7213318 intergenic not near genes chr3R 7213380 intergenic not near genes chr3R_14_7210001 chr3R_7210001 RAL-508 1779 chr3R 7271858 7271908 chr3R 7272207 7272245 16 336 6.5 5.5 6.0 2.3 387 chr3R 7271858 exon CG10032 + chr3R 7272052 exon CG10032 + chr3R 7272245 intron CG10032 + chr3R_16_7270001 chr3R_7270001 RAL-508 1780 chr3R 7277699 7277736 chr3R 7277810 7277847 6 111 1.0 3.5 2.2 1.9 148 chr3R 7277699 intron rn - chr3R 7277773 intron rn - chr3R 7277847 intron rn - chr3R_6_7275001 chr3R_7275001 RAL-508 1781 chr3R 7320402 7320433 chr3R 7320510 7320541 6 108 1.0 5.0 3.0 1.5 139 chr3R 7320402 intergenic not near genes chr3R 7320472 intergenic not near genes chr3R 7320541 intergenic not near genes chr3R_6_7320001 chr3R_7320001 RAL-508 1782 chr3R 7348691 7348700 chr3R 7348794 7348805 6 105 1.5 3.0 2.2 1.9 114 chr3R 7348691 intergenic CG43290 - chr3R 7348748 intergenic CG43290 - chr3R 7348805 intergenic CG43290 - chr3R_6_7345001 chr3R_7345001 RAL-508 1783 chr3R 7364012 7364061 chr3R 7364119 7364159 12 105 4.5 0.5 2.5 3.4 147 chr3R 7364012 intergenic Mst84Dd -,Mst84Dc - chr3R 7364086 intergenic Mst84Dc -,Mst84Dd - chr3R 7364159 intergenic Mst84Dc -,Mst84Dd - chr3R_12_7360001 chr3R_7360001 RAL-508 1784 chr3R 7393257 7393277 chr3R 7393353 7393374 13 96 3.5 6.0 4.8 2.2 117 chr3R 7393257 intergenic not near genes chr3R 7393316 intergenic not near genes chr3R 7393374 intergenic not near genes chr3R_13_7390001 chr3R_7390001 RAL-508 1785 chr3R 7393284 7393300 chr3R 7393352 7393397 5 87 2.0 5.5 3.8 1.0 113 chr3R 7393284 intergenic not near genes chr3R 7393340 intergenic not near genes chr3R 7393397 intergenic not near genes chr3R_5_7390001 chr3R_7390001 RAL-508 1786 chr3R 7396035 7396085 chr3R 7396150 7396200 20 114 1.5 2.0 1.8 7.1 165 chr3R 7396035 intergenic not near genes chr3R 7396118 intergenic not near genes chr3R 7396200 intergenic not near genes chr3R_20_7395001 chr3R_7395001 RAL-508 1787 chr3R 7396353 7396389 chr3R 7396476 7396512 13 120 1.0 3.5 2.2 4.1 159 chr3R 7396353 intergenic not near genes chr3R 7396432 intergenic not near genes chr3R 7396512 intergenic not near genes chr3R_13_7395001 chr3R_7395001 RAL-508 1788 chr3R 7404940 7404970 chr3R 7405034 7405066 8 95 0.0 2.5 1.2 3.6 126 chr3R 7404940 intergenic not near genes chr3R 7405003 intergenic not near genes chr3R 7405066 intergenic not near genes chr3R_8_7405001 chr3R_7405001 RAL-508 1789 chr3R 7410359 7410386 chr3R 7410520 7410548 7 161 9.5 4.5 7.0 0.9 189 chr3R 7410359 intergenic not near genes chr3R 7410454 intergenic not near genes chr3R 7410548 intergenic not near genes chr3R_7_7410001 chr3R_7410001 RAL-508 1790 chr3R 7437654 7437694 chr3R 7437929 7437963 11 280 3.5 0.5 2.0 3.7 309 chr3R 7437654 intergenic not near genes chr3R 7437808 intergenic not near genes chr3R 7437963 intergenic not near genes chr3R_11_7435001 chr3R_7435001 RAL-508 1791 chr3R 7447976 7448010 chr3R 7448073 7448107 6 98 7.0 3.5 5.2 1.0 131 chr3R 7447976 intergenic not near genes chr3R 7448042 intergenic not near genes chr3R 7448107 intergenic not near genes chr3R_6_7445001 chr3R_7445001 RAL-508 1792 chr3R 7509544 7509592 chr3R 7509676 7509683 16 125 2.0 3.0 2.5 4.6 139 chr3R 7509544 3` UTR alpha-Est8 - chr3R 7509614 3` UTR alpha-Est8 - chr3R 7509683 3` UTR alpha-Est8 - chr3R_16_7505001 chr3R_7505001 RAL-508 1793 chr3R 7548585 7548634 chr3R 7548680 7548733 17 98 4.0 0.0 2.0 5.7 148 chr3R 7548585 intron alpha-Est1 - chr3R 7548659 intron alpha-Est1 - chr3R 7548733 intron alpha-Est1 - chr3R_17_7545001 chr3R_7545001 RAL-508 1794 chr3R 7574604 7574653 chr3R 7574701 7574755 13 97 1.5 1.0 1.2 5.9 151 chr3R 7574604 intron CG34127 - chr3R 7574680 intron CG34127 - chr3R 7574755 intron CG34127 - chr3R_13_7570001 chr3R_7570001 RAL-508 1795 chr3R 7656993 7657044 chr3R 7657327 7657378 10 334 2.5 1.5 2.0 3.3 385 chr3R 7656993 intergenic not near genes chr3R 7657186 intergenic not near genes chr3R 7657378 intergenic not near genes chr3R_10_7655001 chr3R_7655001 RAL-508 1796 chr3R 7677897 7677940 chr3R 7678030 7678073 12 131 3.0 5.5 4.2 2.3 176 chr3R 7677897 intron Nlg1 + chr3R 7677985 intron Nlg1 + chr3R 7678073 intron Nlg1 + chr3R_12_7675001 chr3R_7675001 RAL-508 1797 chr3R 7684925 7684971 chr3R 7685257 7685303 14 325 1.5 7.5 4.5 2.5 378 chr3R 7684925 intron Nlg1 + chr3R 7685114 intron Nlg1 + chr3R 7685303 intron Nlg1 + chr3R_14_7685001 chr3R_7685001 RAL-508 1798 chr3R 7694567 7694591 chr3R 7713648 7713672 invader3 4 19081 2.0 6.5 4.2 0.8 19105 chr3R 7694567 3` UTR Nlg1 + chr3R 7704120 intergenic not near genes chr3R 7713672 intergenic not near genes chr3R_4_7700001 chr3R_7700001 RAL-508 1799 chr3R 7729449 7729499 chr3R 7737407 7737440 Stalker2 20 7955 5.5 5.5 5.5 3.1 7991 chr3R 7729449 intergenic not near genes chr3R 7733444 intergenic not near genes chr3R 7737440 intergenic not near genes chr3R_20_7730001 chr3R_7730001 RAL-508 1800 chr3R 7809905 7809944 chr3R 7810000 7810027 7 96 2.0 5.0 3.5 1.6 122 chr3R 7809905 5` UTR CG2993 - chr3R 7809966 5` UTR CG2993 - chr3R 7810027 intergenic CG2993 - chr3R_7_7805001 chr3R_7805001 RAL-508 1801 chr3R 7973299 7973344 chr3R 7974381 7974418 1360 10 1081 3.5 1.5 2.5 2.9 1119 chr3R 7973299 intergenic not near genes chr3R 7973858 intergenic not near genes chr3R 7974418 3` UTR CD98hc - chr3R_10_7970001 chr3R_7970001 RAL-508 1802 chr3R 8013887 8013895 chr3R 8022836 8022877 7 8960 13.0 29.5 21.2 0.3 8990 chr3R 8013887 exon Pbp95 + chr3R 8018382 exon CG2747 - chr3R 8022877 exon CG2747 - chr3R_7_8015001 chr3R_8015001 RAL-508 1803 chr3R 8049032 8049063 chr3R 8049624 8049657 15 592 6.5 2.5 4.5 2.7 625 chr3R 8049032 intron CG43060 + chr3R 8049344 intron,intron CG43060 +,CG43618 + chr3R 8049657 intron CG43060 + chr3R_15_8045001 chr3R_8045001 RAL-508 1804 chr3R 8082566 8082595 chr3R 8082663 8082692 7 97 5.5 5.5 5.5 1.1 126 chr3R 8082566 intron mAChR-B + chr3R 8082629 intron mAChR-B + chr3R 8082692 intron mAChR-B + chr3R_7_8080001 chr3R_8080001 RAL-508 1805 chr3R 8090251 8090302 chr3R 8090448 8090499 16 194 3.5 9.5 6.5 2.1 248 chr3R 8090251 5` UTR CR44330 + chr3R 8090375 intergenic CR44330 + chr3R 8090499 intergenic CR44330 + chr3R_16_8090001 chr3R_8090001 RAL-508 1806 chr3R 8090553 8090569 chr3R 8094049 8094066 297 5 3496 4.0 12.5 8.2 0.5 3513 chr3R 8090553 intergenic CR44330 + chr3R 8092310 intergenic not near genes chr3R 8094066 intergenic CG7900 + chr3R_5_8090001 chr3R_8090001 RAL-508 1807 chr3R 8094391 8094416 chr3R 8099716 8099741 Transpac 4 5325 5.0 5.5 5.2 0.6 5350 chr3R 8094391 intron CG7900 + chr3R 8097066 intron CG7900 + chr3R 8099741 intron CG7900 + chr3R_4_8095001 chr3R_8095001 RAL-508 1808 chr3R 8101750 8101785 chr3R 8104854 8104873 G2 9 3098 2.0 2.5 2.2 2.8 3123 chr3R 8101750 exon CG7900 + chr3R 8103312 intron CG7900 + chr3R 8104873 3` UTR CG7900 + chr3R_9_8100001 chr3R_8100001 RAL-508 1809 chr3R 8207563 8207582 chr3R 8208421 8208435 F-element 4 855 5.5 5.5 5.5 0.6 872 chr3R 8207563 intergenic not near genes chr3R 8207999 intergenic not near genes chr3R 8208435 intergenic not near genes chr3R_4_8205001 chr3R_8205001 RAL-508 1810 chr3R 8255496 8255537 chr3R 8255604 8255640 9 106 4.0 10.5 7.2 1.1 144 chr3R 8255496 intron mtg + chr3R 8255568 intron mtg + chr3R 8255640 intron mtg + chr3R_9_8255001 chr3R_8255001 RAL-508 1811 chr3R 8273728 8273761 chr3R 8273832 8273868 11 107 4.0 4.5 4.2 2.1 140 chr3R 8273728 intergenic not near genes chr3R 8273798 intergenic not near genes chr3R 8273868 intergenic not near genes chr3R_11_8270001 chr3R_8270001 RAL-508 1812 chr3R 8304226 8304272 chr3R 8304342 8304382 8 115 4.5 2.5 3.5 1.8 156 chr3R 8304226 3` UTR Sgt1 - chr3R 8304304 3` UTR Sgt1 - chr3R 8304382 3` UTR Sgt1 - chr3R_8_8300001 chr3R_8300001 RAL-508 1813 chr3R 8339246 8339247 chr3R 21907534 21907536 11 13568288 10.5 22.0 16.2 0.6 13568290 chr3R 8339246 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_11_15120001 chr3R_15120001 RAL-508 1814 chr3R 8403005 8403036 chr3R 8412171 8412221 roo 12 9179 3.0 3.5 3.2 2.9 9216 chr3R 8403005 intron CG45263 - chr3R 8407613 intron CG45263 - chr3R 8412221 intron CG45263 - chr3R_12_8405001 chr3R_8405001 RAL-508 1815 chr3R 8534759 8534813 chr3R 8535036 8535090 21 275 2.0 2.5 2.2 6.6 331 chr3R 8534759 intergenic not near genes chr3R 8534924 intergenic not near genes chr3R 8535090 intergenic not near genes chr3R_21_8530001 chr3R_8530001 RAL-508 1816 chr3R 8570461 8570509 chr3R 8575147 8575162 HMS-Beagle 12 4676 1.0 4.5 2.8 3.2 4701 chr3R 8570461 intergenic not near genes chr3R 8572812 intergenic not near genes chr3R 8575162 intergenic not near genes chr3R_12_8570001 chr3R_8570001 RAL-508 1817 chr3R 8601761 8601792 chr3R 8610930 8610944 roo 6 9164 4.5 3.5 4.0 1.2 9183 chr3R 8601761 intron 5-HT2B + chr3R 8606352 intron 5-HT2B + chr3R 8610944 intron 5-HT2B + chr3R_6_8605001 chr3R_8605001 RAL-508 1818 chr3R 8614773 8614815 chr3R 8614995 8615036 11 217 1.0 8.5 4.8 1.9 263 chr3R 8614773 intron 5-HT2B + chr3R 8614904 intron 5-HT2B + chr3R 8615036 intron 5-HT2B + chr3R_11_8610001 chr3R_8610001 RAL-508 1819 chr3R 8621531 8621572 chr3R 8621617 8621628 4 70 2.5 5.5 4.0 0.8 97 chr3R 8621531 intron 5-HT2B + chr3R 8621580 intron 5-HT2B + chr3R 8621628 intron 5-HT2B + chr3R_4_8620001 chr3R_8620001 RAL-508 1820 chr3R 8639668 8639717 chr3R 8639769 8639819 17 99 1.5 0.5 1.0 8.5 151 chr3R 8639668 intergenic not near genes chr3R 8639744 intergenic not near genes chr3R 8639819 intergenic not near genes chr3R_17_8635001 chr3R_8635001 RAL-508 1821 chr3R 8685276 8685315 chr3R 8685396 8685434 12 120 4.0 2.5 3.2 2.9 158 chr3R 8685276 intron CR44937 - chr3R 8685355 intron CR44937 - chr3R 8685434 intron CR44937 - chr3R_12_8685001 chr3R_8685001 RAL-508 1822 chr3R 8707347 8707375 chr3R 8709807 8709836 jockey 11 2461 2.5 3.0 2.8 2.9 2489 chr3R 8707347 intergenic not near genes chr3R 8708592 intergenic not near genes chr3R 8709836 intergenic not near genes chr3R_11_8705001 chr3R_8705001 RAL-508 1823 chr3R 8758451 8758471 chr3R 8758562 8758582 7 110 9.5 0.0 4.8 1.2 131 chr3R 8758451 intron,intron CG11768 -,CG34135 - chr3R 8758516 intron,intron CG11768 -,CG34135 - chr3R 8758582 intron,intron CG11768 -,CG34135 - chr3R_7_8755001 chr3R_8755001 RAL-508 1824 chr3R 8811204 8811256 chr3R 8811316 8811336 8 108 2.5 1.5 2.0 2.7 132 chr3R 8811204 intron CG9837 - chr3R 8811270 intron CG9837 - chr3R 8811336 intron CG9837 - chr3R_8_8810001 chr3R_8810001 RAL-508 1825 chr3R 8821226 8821274 chr3R 8821346 8821394 10 119 1.5 1.5 1.5 4.0 168 chr3R 8821226 intergenic CR43130 + chr3R 8821310 intergenic CR43130 + chr3R 8821394 intergenic CR43130 + chr3R_10_8820001 chr3R_8820001 RAL-508 1826 chr3R 8894859 8894902 chr3R 8896032 8896078 1360 10 1173 1.0 5.0 3.0 2.5 1219 chr3R 8894859 intron pyd - chr3R 8895468 intron pyd - chr3R 8896078 intron pyd - chr3R_10_8895001 chr3R_8895001 RAL-508 1827 chr3R 8898207 8898213 chr3R 8913806 8913809 297 6 15600 9.5 2.5 6.0 0.9 15602 chr3R 8898207 intron pyd - chr3R 8906008 intron pyd - chr3R 8913809 intron pyd - chr3R_6_8905001 chr3R_8905001 RAL-508 1828 chr3R 8948282 8948306 chr3R 8948412 8948435 5 129 4.0 4.5 4.2 1.0 153 chr3R 8948282 intergenic not near genes chr3R 8948358 intergenic not near genes chr3R 8948435 intergenic not near genes chr3R_5_8945001 chr3R_8945001 RAL-508 1829 chr3R 8948307 8948329 chr3R 8948408 8948429 9 122 3.0 4.0 3.5 2.0 122 chr3R 8948307 intergenic not near genes chr3R 8948368 intergenic not near genes chr3R 8948429 intergenic not near genes chr3R_9_8945001 chr3R_8945001 RAL-508 1830 chr3R 9036354 9036405 chr3R 9036452 9036503 6 97 5.0 1.5 3.2 1.4 149 chr3R 9036354 intron neur - chr3R 9036428 intron neur - chr3R 9036503 intron neur - chr3R_6_9035001 chr3R_9035001 RAL-508 1831 chr3R 9101819 9101865 chr3R 9101937 9101977 8 117 2.0 3.5 2.8 2.1 158 chr3R 9101819 intron pum - chr3R 9101898 intron pum - chr3R 9101977 intron pum - chr3R_8_9100001 chr3R_9100001 RAL-508 1832 chr3R 9104460 9104480 chr3R 9104570 9104587 7 108 8.0 3.5 5.8 1.0 127 chr3R 9104460 intron pum - chr3R 9104524 intron pum - chr3R 9104587 intron pum - chr3R_7_9100001 chr3R_9100001 RAL-508 1833 chr3R 9104486 9104499 chr3R 9104565 9104609 6 97 2.0 2.0 2.0 2.0 123 chr3R 9104486 intron pum - chr3R 9104548 intron pum - chr3R 9104609 intron pum - chr3R_6_9100001 chr3R_9100001 RAL-508 1834 chr3R 9108849 9108877 chr3R 9108945 9108973 4 96 0.5 4.5 2.5 1.1 124 chr3R 9108849 intron pum - chr3R 9108911 intron pum - chr3R 9108973 intron pum - chr3R_4_9105001 chr3R_9105001 RAL-508 1835 chr3R 9278771 9278799 chr3R 9284049 9284079 Rt1a 5 5280 1.0 6.5 3.8 1.0 5308 chr3R 9278771 intergenic not near genes chr3R 9281425 intergenic not near genes chr3R 9284079 intergenic not near genes chr3R_5_9280001 chr3R_9280001 RAL-508 1836 chr3R 9278801 9278808 chr3R 9284046 9284088 Rt1a 4 5270 1.0 7.0 4.0 0.8 5287 chr3R 9278801 intergenic not near genes chr3R 9281444 intergenic not near genes chr3R 9284088 intergenic not near genes chr3R_4_9280001 chr3R_9280001 RAL-508 1837 chr3R 9295003 9295037 chr3R 9295101 9295135 5 96 1.0 1.5 1.2 2.3 132 chr3R 9295003 3` UTR CG8861 - chr3R 9295069 3` UTR CG8861 - chr3R 9295135 3` UTR CG8861 - chr3R_5_9295001 chr3R_9295001 RAL-508 1838 chr3R 9319556 9319603 chr3R 9320010 9320049 jockey 18 454 1.5 4.5 3.0 4.5 493 chr3R 9319556 intron CG8861 - chr3R 9319802 intron CG8861 - chr3R 9320049 intron CG8861 - chr3R_18_9315001 chr3R_9315001 RAL-508 1839 chr3R 9361814 9361843 chr3R 9362075 9362102 pogo 9 260 2.0 3.0 2.5 2.6 288 chr3R 9361814 3` UTR CG45050 + chr3R 9361958 3` UTR CG45050 + chr3R 9362102 3` UTR CG45050 + chr3R_9_9360001 chr3R_9360001 RAL-508 1840 chr3R 9601454 9601493 chr3R 9601592 9601631 15 137 2.5 4.5 3.5 3.3 177 chr3R 9601454 intron CG8312 + chr3R 9601542 intron CG8312 + chr3R 9601631 intron CG8312 + chr3R_15_9600001 chr3R_9600001 RAL-508 1841 chr3R 9734663 9734709 chr3R 9734772 9734818 15 108 2.0 1.5 1.8 5.4 155 chr3R 9734663 3` UTR CG12950 - chr3R 9734740 3` UTR CG12950 - chr3R 9734818 3` UTR CG12950 - chr3R_15_9730001 chr3R_9730001 RAL-508 1842 chr3R 9878006 9878017 chr3R 9878113 9878125 4 107 3.5 1.0 2.2 1.2 119 chr3R 9878006 intron,intron Glut4EF +,CR45029 - chr3R 9878066 intron,intron Glut4EF +,CR45029 - chr3R 9878125 intron,intron Glut4EF +,CR45029 - chr3R_4_9875001 chr3R_9875001 RAL-508 1843 chr3R 9880173 9880219 chr3R 9883245 9883290 17 3074 26.0 24.0 25.0 0.7 3117 chr3R 9880173 intron Glut4EF + chr3R 9881732 intron Glut4EF + chr3R 9883290 intron Glut4EF + chr3R_17_9880001 chr3R_9880001 RAL-508 1844 chr3R 9891450 9891473 chr3R 9891610 9891628 5 159 1.5 0.5 1.0 2.5 178 chr3R 9891450 intron Glut4EF + chr3R 9891539 intron Glut4EF + chr3R 9891628 intron Glut4EF + chr3R_5_9890001 chr3R_9890001 RAL-508 1845 chr3R 9898767 9898816 chr3R 9898879 9898928 15 110 4.5 5.0 4.8 2.6 161 chr3R 9898767 intron Glut4EF + chr3R 9898848 intron Glut4EF + chr3R 9898928 intron Glut4EF + chr3R_15_9895001 chr3R_9895001 RAL-508 1846 chr3R 9936857 9936911 chr3R 9936949 9937007 20 92 3.0 3.0 3.0 5.0 150 chr3R 9936857 intron Glut4EF + chr3R 9936932 intron Glut4EF + chr3R 9937007 intron Glut4EF + chr3R_20_9935001 chr3R_9935001 RAL-508 1847 chr3R 9942534 9942548 chr3R 9942868 9942881 4 334 4.5 5.5 5.0 0.7 347 chr3R 9942534 intron Glut4EF + chr3R 9942708 intron Glut4EF + chr3R 9942881 intron Glut4EF + chr3R_4_9940001 chr3R_9940001 RAL-508 1848 chr3R 10140423 10140457 chr3R 10140526 10140566 6 109 5.0 5.5 5.2 1.0 143 chr3R 10140423 3` UTR TAF1B - chr3R 10140494 3` UTR TAF1B - chr3R 10140566 3` UTR TAF1B - chr3R_6_10140001 chr3R_10140001 RAL-508 1849 chr3R 10147430 10147446 chr3R 10147643 10147664 4 217 2.5 3.5 3.0 1.0 234 chr3R 10147430 intron Invadolysin + chr3R 10147547 intron Invadolysin + chr3R 10147664 intron Invadolysin + chr3R_4_10145001 chr3R_10145001 RAL-508 1850 chr3R 10147447 10147468 chr3R 10147640 10147685 6 212 1.0 3.5 2.2 1.9 238 chr3R 10147447 intron Invadolysin + chr3R 10147566 intron Invadolysin + chr3R 10147685 intron Invadolysin + chr3R_6_10145001 chr3R_10145001 RAL-508 1851 chr3R 10158465 10158518 chr3R 10158567 10158619 10 100 6.0 2.0 4.0 2.0 154 chr3R 10158465 3` UTR Invadolysin + chr3R 10158542 3` UTR Invadolysin + chr3R 10158619 3` UTR Invadolysin + chr3R_10_10155001 chr3R_10155001 RAL-508 1852 chr3R 10231778 10231807 chr3R 10237375 10237403 mdg3 7 5596 2.5 6.0 4.2 1.3 5625 chr3R 10231778 intron CG42795 + chr3R 10234590 intron CG42795 + chr3R 10237403 intron CG42795 + chr3R_7_10230001 chr3R_10230001 RAL-508 1853 chr3R 10255362 10255386 chr3R 10260822 10260841 I-element 7 5459 7.5 2.5 5.0 1.2 5479 chr3R 10255362 3` UTR Sirt6 - chr3R 10258102 intron Sirt6 - chr3R 10260841 exon Sirt6 - chr3R_7_10255001 chr3R_10255001 RAL-508 1854 chr3R 10277114 10277163 chr3R 10277213 10277263 14 98 3.5 4.5 4.0 2.8 149 chr3R 10277114 intron CG43143 + chr3R 10277188 intron CG43143 + chr3R 10277263 intron CG43143 + chr3R_14_10275001 chr3R_10275001 RAL-508 1855 chr3R 10289046 10289092 chr3R 10289193 10289231 15 141 3.0 3.5 3.2 3.6 185 chr3R 10289046 intron CG43143 + chr3R 10289138 intron CG43143 + chr3R 10289231 intron CG43143 + chr3R_15_10285001 chr3R_10285001 RAL-508 1856 chr3R 10403017 10403062 chr3R 10403111 10403160 5 99 3.0 1.5 2.2 1.6 143 chr3R 10403017 3` UTR CG6325 - chr3R 10403088 3` UTR CG6325 - chr3R 10403160 3` UTR CG6325 - chr3R_5_10400001 chr3R_10400001 RAL-508 1857 chr3R 10428562 10428589 chr3R 10428771 10428810 4 218 8.5 0.0 4.2 0.8 248 chr3R 10428562 intergenic not near genes chr3R 10428686 intergenic not near genes chr3R 10428810 intergenic not near genes chr3R_4_10425001 chr3R_10425001 RAL-508 1858 chr3R 10531854 10531888 chr3R 10531955 10531989 10 100 5.0 0.0 2.5 2.9 135 chr3R 10531854 intron hth - chr3R 10531922 intron hth - chr3R 10531989 intron hth - chr3R_10_10530001 chr3R_10530001 RAL-508 1859 chr3R 10535314 10535342 chr3R 10535427 10535449 7 112 1.5 0.0 0.8 3.9 135 chr3R 10535314 intron hth - chr3R 10535382 intron hth - chr3R 10535449 intron hth - chr3R_7_10535001 chr3R_10535001 RAL-508 1860 chr3R 10609354 10609365 chr3R 10609457 10609473 5 106 3.0 0.5 1.8 1.8 119 chr3R 10609354 intron hth - chr3R 10609414 intron hth - chr3R 10609473 intron hth - chr3R_5_10605001 chr3R_10605001 RAL-508 1861 chr3R 10641573 10641623 chr3R 10641673 10641707 9 97 2.0 4.0 3.0 2.2 134 chr3R 10641573 5` UTR CR44018 + chr3R 10641640 5` UTR CR44018 + chr3R 10641707 5` UTR CR44018 + chr3R_9_10640001 chr3R_10640001 RAL-508 1862 chr3R 10651789 10651844 chr3R 10651907 10651935 12 115 2.5 0.0 1.2 5.5 146 chr3R 10651789 intergenic not near genes chr3R 10651862 intergenic not near genes chr3R 10651935 intergenic not near genes chr3R_12_10650001 chr3R_10650001 RAL-508 1863 chr3R 10724937 10724979 chr3R 10725035 10725041 17 92 2.5 6.0 4.2 3.3 104 chr3R 10724937 intergenic not near genes chr3R 10724989 intergenic not near genes chr3R 10725041 intergenic not near genes chr3R_17_10720001 chr3R_10720001 RAL-508 1864 chr3R 10727627 10727678 chr3R 10727724 10727764 17 88 3.5 5.0 4.2 3.3 137 chr3R 10727627 intergenic not near genes chr3R 10727696 intergenic not near genes chr3R 10727764 intergenic not near genes chr3R_17_10725001 chr3R_10725001 RAL-508 1865 chr3R 10730928 10730978 chr3R 10731242 10731292 12 312 3.5 2.5 3.0 3.0 364 chr3R 10730928 intergenic not near genes chr3R 10731110 intergenic not near genes chr3R 10731292 intergenic not near genes chr3R_12_10730001 chr3R_10730001 RAL-508 1866 chr3R 10737548 10737593 chr3R 10737934 10737979 8 386 6.0 2.0 4.0 1.6 431 chr3R 10737548 intergenic TkR86C - chr3R 10737764 3` UTR TkR86C - chr3R 10737979 3` UTR TkR86C - chr3R_8_10735001 chr3R_10735001 RAL-508 1867 chr3R 10752709 10752754 chr3R 10752813 10752856 10 95 0.0 7.5 3.8 2.1 147 chr3R 10752709 intergenic not near genes chr3R 10752782 intergenic not near genes chr3R 10752856 intergenic CG14691 - chr3R_10_10750001 chr3R_10750001 RAL-508 1868 chr3R 10804153 10804199 chr3R 10811705 10811751 17.6 4 7552 2.5 4.0 3.2 1.0 7598 chr3R 10804153 intergenic CG14692 - chr3R 10807952 intergenic not near genes chr3R 10811751 3` UTR CG14693 - chr3R_4_10805001 chr3R_10805001 RAL-508 1869 chr3R 10870848 10870897 chr3R 10870948 10870996 24 98 6.0 6.5 6.2 3.3 148 chr3R 10870848 intergenic Fdh -,Tsp86D + chr3R 10870922 3` UTR Fdh - chr3R 10870996 3` UTR Fdh - chr3R_24_10870001 chr3R_10870001 RAL-508 1870 chr3R 10919677 10919716 chr3R 10919775 10919813 11 97 5.0 1.5 3.2 2.6 136 chr3R 10919677 intergenic not near genes chr3R 10919745 intergenic not near genes chr3R 10919813 intergenic not near genes chr3R_11_10915001 chr3R_10915001 RAL-508 1871 chr3R 10920036 10920079 chr3R 10920133 10920173 12 96 4.5 2.0 3.2 2.9 137 chr3R 10920036 intergenic not near genes chr3R 10920104 intergenic not near genes chr3R 10920173 intergenic not near genes chr3R_12_10920001 chr3R_10920001 RAL-508 1872 chr3R 10927352 10927377 chr3R 10927615 10927633 5 262 2.0 3.5 2.8 1.3 281 chr3R 10927352 intergenic not near genes chr3R 10927492 intergenic not near genes chr3R 10927633 intergenic not near genes chr3R_5_10925001 chr3R_10925001 RAL-508 1873 chr3R 10938958 10938997 chr3R 10939072 10939116 9 112 0.5 5.0 2.8 2.4 158 chr3R 10938958 intergenic not near genes chr3R 10939037 intergenic not near genes chr3R 10939116 intergenic not near genes chr3R_9_10935001 chr3R_10935001 RAL-508 1874 chr3R 11025165 11025216 chr3R 11025335 11025349 13 164 1.5 1.5 1.5 5.2 184 chr3R 11025165 intron CG34114 + chr3R 11025257 intron CG34114 + chr3R 11025349 intron CG34114 + chr3R_13_11025001 chr3R_11025001 RAL-508 1875 chr3R 11054563 11054586 chr3R 11054671 11054703 4 114 3.5 2.5 3.0 1.0 140 chr3R 11054563 intergenic not near genes chr3R 11054633 intergenic not near genes chr3R 11054703 intergenic not near genes chr3R_4_11050001 chr3R_11050001 RAL-508 1876 chr3R 11056874 11056894 chr3R 11056972 11056992 4 98 6.0 0.0 3.0 1.0 118 chr3R 11056874 intergenic not near genes chr3R 11056933 intergenic not near genes chr3R 11056992 intergenic not near genes chr3R_4_11055001 chr3R_11055001 RAL-508 1877 chr3R 11058989 11059032 chr3R 11059113 11059128 7 119 1.0 5.0 3.0 1.8 139 chr3R 11058989 intergenic not near genes chr3R 11059058 intergenic not near genes chr3R 11059128 intergenic not near genes chr3R_7_11055001 chr3R_11055001 RAL-508 1878 chr3R 11059425 11059475 chr3R 11059521 11059533 10 90 5.5 3.0 4.2 1.9 108 chr3R 11059425 intergenic not near genes chr3R 11059479 intergenic not near genes chr3R 11059533 intergenic not near genes chr3R_10_11055001 chr3R_11055001 RAL-508 1879 chr3R 11065572 11065598 chr3R 11071246 11071272 297 4 5672 4.0 4.5 4.2 0.8 5700 chr3R 11065572 intergenic not near genes chr3R 11068422 intergenic not near genes chr3R 11071272 intergenic not near genes chr3R_4_11065001 chr3R_11065001 RAL-508 1880 chr3R 11085462 11085477 chr3R 11085540 11085573 5 92 3.0 0.5 1.8 1.8 111 chr3R 11085462 3` UTR CR44940 - chr3R 11085518 intergenic CR44940 - chr3R 11085573 intergenic CR44940 - chr3R_5_11085001 chr3R_11085001 RAL-508 1881 chr3R 11085760 11085804 chr3R 11086072 11086116 7 311 5.5 3.0 4.2 1.3 356 chr3R 11085760 intergenic CR44940 - chr3R 11085938 intergenic CR44940 - chr3R 11086116 intergenic not near genes chr3R_7_11085001 chr3R_11085001 RAL-508 1882 chr3R 11151105 11151151 chr3R 11151317 11151332 4 206 3.0 4.5 3.8 0.8 227 chr3R 11151105 3` UTR Ugt86Di - chr3R 11151218 3` UTR Ugt86Di - chr3R 11151332 3` UTR Ugt86Di - chr3R_4_11150001 chr3R_11150001 RAL-508 1883 chr3R 11155023 11155068 chr3R 11155121 11155163 10 97 2.0 5.0 3.5 2.2 140 chr3R 11155023 intron Ugt86Dc + chr3R 11155093 intron Ugt86Dc + chr3R 11155163 intron Ugt86Dc + chr3R_10_11155001 chr3R_11155001 RAL-508 1884 chr3R 11197972 11198010 chr3R 11198091 11198129 10 116 4.0 1.5 2.8 2.6 157 chr3R 11197972 intron cu + chr3R 11198050 intron cu + chr3R 11198129 intron cu + chr3R_10_11195001 chr3R_11195001 RAL-508 1885 chr3R 11258837 11258878 chr3R 11259277 11259308 15 438 5.5 3.5 4.5 2.7 471 chr3R 11258837 intergenic not near genes chr3R 11259072 intergenic not near genes chr3R 11259308 intergenic not near genes chr3R_15_11255001 chr3R_11255001 RAL-508 1886 chr3R 11379218 11379254 chr3R 11388393 11388393 roo 9 9171 9.0 4.0 6.5 1.2 9175 chr3R 11379218 intron pros + chr3R 11383806 intron pros + chr3R 11388393 intron pros + chr3R_9_11380001 chr3R_11380001 RAL-508 1887 chr3R 11545975 11546001 chr3R 11546088 11546115 5 114 1.5 3.0 2.2 1.6 140 chr3R 11545975 intergenic not near genes chr3R 11546045 intergenic not near genes chr3R 11546115 intergenic not near genes chr3R_5_11545001 chr3R_11545001 RAL-508 1888 chr3R 11612424 11612471 chr3R 11612520 11612568 11 96 3.0 4.0 3.5 2.4 144 chr3R 11612424 intron Jupiter - chr3R 11612496 intron Jupiter - chr3R 11612568 intron Jupiter - chr3R_11_11610001 chr3R_11610001 RAL-508 1889 chr3R 11625631 11625684 chr3R 11625740 11625780 13 103 4.5 3.0 3.8 2.7 149 chr3R 11625631 5` UTR,3` UTR CG6808 -,CG6813 - chr3R 11625706 exon CG6813 - chr3R 11625780 exon CG6813 - chr3R_13_11625001 chr3R_11625001 RAL-508 1890 chr3R 11670975 11671014 chr3R 11671073 11671102 6 96 2.0 5.0 3.5 1.3 127 chr3R 11670975 exon CG42327 + chr3R 11671038 intron CG42327 + chr3R 11671102 intron CG42327 + chr3R_6_11670001 chr3R_11670001 RAL-508 1891 chr3R 11694706 11694748 chr3R 11694817 11694858 10 111 5.5 1.0 3.2 2.4 152 chr3R 11694706 intergenic Fer3 - chr3R 11694782 intergenic Fer3 - chr3R 11694858 intergenic not near genes chr3R_10_11690001 chr3R_11690001 RAL-508 1892 chr3R 11695720 11695770 chr3R 11695821 11695871 21 99 2.5 2.5 2.5 6.0 151 chr3R 11695720 intergenic not near genes chr3R 11695796 intergenic not near genes chr3R 11695871 intergenic not near genes chr3R_21_11695001 chr3R_11695001 RAL-508 1893 chr3R 11708613 11708663 chr3R 11708841 11708887 13 227 4.0 1.0 2.5 3.7 274 chr3R 11708613 intergenic not near genes chr3R 11708750 intergenic not near genes chr3R 11708887 intergenic not near genes chr3R_13_11705001 chr3R_11705001 RAL-508 1894 chr3R 11710191 11710233 chr3R 11710287 11710327 14 96 6.5 5.5 6.0 2.0 136 chr3R 11710191 intergenic not near genes chr3R 11710259 intergenic not near genes chr3R 11710327 intergenic not near genes chr3R_14_11710001 chr3R_11710001 RAL-508 1895 chr3R 11728175 11728205 chr3R 11728272 11728304 6 96 0.0 4.0 2.0 2.0 129 chr3R 11728175 intron CG12594 + chr3R 11728240 intron CG12594 + chr3R 11728304 intron CG12594 + chr3R_6_11725001 chr3R_11725001 RAL-508 1896 chr3R 11830331 11830358 chr3R 11830435 11830462 9 104 3.0 4.5 3.8 1.9 131 chr3R 11830331 intron CG6959 - chr3R 11830396 intron CG6959 - chr3R 11830462 intron CG6959 - chr3R_9_11830001 chr3R_11830001 RAL-508 1897 chr3R 11841088 11841099 chr3R 11846258 11846280 BS 5 5191 2.0 4.0 3.0 1.2 5192 chr3R 11841088 intron CG6959 - chr3R 11843684 intron CG6959 - chr3R 11846280 intron CG6959 - chr3R_5_11840001 chr3R_11840001 RAL-508 1898 chr3R 11853414 11853466 chr3R 11853583 11853633 19 168 0.5 5.0 2.8 5.0 219 chr3R 11853414 intron CG6959 - chr3R 11853524 intron CG6959 - chr3R 11853633 intron CG6959 - chr3R_19_11850001 chr3R_11850001 RAL-508 1899 chr3R 11853750 11853800 chr3R 11853875 11853925 20 124 2.5 3.5 3.0 5.0 175 chr3R 11853750 intron CG6959 - chr3R 11853838 intron CG6959 - chr3R 11853925 intron CG6959 - chr3R_20_11850001 chr3R_11850001 RAL-508 1900 chr3R 11957833 11957871 chr3R 11958136 11958139 S-element 7 296 0.5 0.5 0.5 4.7 306 chr3R 11957833 intergenic not near genes chr3R 11957986 intergenic not near genes chr3R 11958139 intergenic not near genes chr3R_7_11955001 chr3R_11955001 RAL-508 1901 chr3R 12022864 12022916 chr3R 12025061 12025113 pogo 23 2196 2.5 3.5 3.0 5.8 2249 chr3R 12022864 intergenic not near genes chr3R 12023988 intergenic not near genes chr3R 12025113 intergenic not near genes chr3R_23_12020001 chr3R_12020001 RAL-508 1902 chr3R 12029924 12029949 chr3R 12030031 12030056 6 105 2.0 2.0 2.0 2.0 132 chr3R 12029924 3` UTR,5` UTR,5` UTR CG31358 -,CG42504 -,CG42505 - chr3R 12029990 3` UTR,5` UTR,5` UTR CG31358 -,CG42504 -,CG42505 - chr3R 12030056 exon,5` UTR,5` UTR CG31358 -,CG42504 -,CG42505 - chr3R_6_12025001 chr3R_12025001 RAL-508 1903 chr3R 12045156 12045164 chr3R 12045251 12045260 4 96 8.0 3.0 5.5 0.6 104 chr3R 12045156 intergenic not near genes chr3R 12045208 intergenic not near genes chr3R 12045260 intergenic not near genes chr3R_4_12045001 chr3R_12045001 RAL-508 1904 chr3R 12097236 12097274 chr3R 12097354 12097388 8 122 6.0 2.5 4.2 1.5 152 chr3R 12097236 intron dpr17 + chr3R 12097312 intron dpr17 + chr3R 12097388 intron dpr17 + chr3R_8_12095001 chr3R_12095001 RAL-508 1905 chr3R 12098731 12098775 chr3R 12098843 12098881 6 107 4.5 4.5 4.5 1.1 150 chr3R 12098731 intron dpr17 + chr3R 12098806 intron dpr17 + chr3R 12098881 intron dpr17 + chr3R_6_12095001 chr3R_12095001 RAL-508 1906 chr3R 12105530 12105580 chr3R 12105627 12105652 16 95 3.5 5.0 4.2 3.1 122 chr3R 12105530 intron dpr17 + chr3R 12105591 intron dpr17 + chr3R 12105652 intron dpr17 + chr3R_16_12105001 chr3R_12105001 RAL-508 1907 chr3R 12214355 12214366 chr3R 12214444 12214465 6 96 8.0 2.5 5.2 1.0 110 chr3R 12214355 3` UTR CG4848 - chr3R 12214410 3` UTR CG4848 - chr3R 12214465 3` UTR CG4848 - chr3R_6_12210001 chr3R_12210001 RAL-508 1908 chr3R 12257425 12257474 chr3R 12257517 12257567 12 91 3.5 3.5 3.5 2.7 142 chr3R 12257425 intergenic not near genes chr3R 12257496 intergenic not near genes chr3R 12257567 intergenic not near genes chr3R_12_12255001 chr3R_12255001 RAL-508 1909 chr3R 12267849 12267873 chr3R 12267949 12267973 4 100 2.0 4.5 3.2 1.0 124 chr3R 12267849 intron svp + chr3R 12267911 intron svp + chr3R 12267973 intron svp + chr3R_4_12265001 chr3R_12265001 RAL-508 1910 chr3R 12392870 12392894 chr3R 12392990 12393013 6 116 3.5 8.5 6.0 0.9 143 chr3R 12392870 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12392942 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12393013 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R_6_12390001 chr3R_12390001 RAL-508 1911 chr3R 12406638 12406687 chr3R 12409771 12409819 13 3135 25.5 24.5 25.0 0.5 3181 chr3R 12406638 5` UTR CG5167 + chr3R 12408228 intergenic CG5196 +,CG5167 + chr3R 12409819 intron CG5196 + chr3R_13_12405001 chr3R_12405001 RAL-508 1912 chr3R 12532244 12532295 chr3R 12532345 12532397 12 101 2.0 4.0 3.0 3.0 153 chr3R 12532244 intron Octbeta3R - chr3R 12532320 intron Octbeta3R - chr3R 12532397 intron Octbeta3R - chr3R_12_12530001 chr3R_12530001 RAL-508 1913 chr3R 12555429 12555442 chr3R 12555521 12555541 5 96 5.0 1.0 3.0 1.2 112 chr3R 12555429 intron Octbeta2R - chr3R 12555485 intron Octbeta2R - chr3R 12555541 intron Octbeta2R - chr3R_5_12555001 chr3R_12555001 RAL-508 1914 chr3R 12574806 12574837 chr3R 12575574 12575604 INE-1 10 770 3.5 5.5 4.5 1.8 798 chr3R 12574806 intron Octbeta2R - chr3R 12575205 intron Octbeta2R - chr3R 12575604 intron Octbeta2R - chr3R_10_12575001 chr3R_12575001 RAL-508 1915 chr3R 12598994 12599021 chr3R 12599153 12599168 4 156 7.0 8.5 7.8 0.5 174 chr3R 12598994 intergenic not near genes chr3R 12599081 intergenic not near genes chr3R 12599168 intergenic not near genes chr3R_4_12595001 chr3R_12595001 RAL-508 1916 chr3R 12599352 12599377 chr3R 12599454 12599477 5 102 8.0 3.5 5.8 0.7 125 chr3R 12599352 intergenic not near genes chr3R 12599414 intergenic not near genes chr3R 12599477 intergenic not near genes chr3R_5_12595001 chr3R_12595001 RAL-508 1917 chr3R 12720709 12720759 chr3R 12720898 12720922 16 185 6.5 4.5 5.5 2.5 213 chr3R 12720709 intron Men - chr3R 12720816 intron Men - chr3R 12720922 intron Men - chr3R_16_12720001 chr3R_12720001 RAL-508 1918 chr3R 12735162 12735171 chr3R 12735432 12735440 6 270 3.0 2.0 2.5 1.7 278 chr3R 12735162 intergenic not near genes chr3R 12735301 intergenic not near genes chr3R 12735440 intergenic not near genes chr3R_6_12735001 chr3R_12735001 RAL-508 1919 chr3R 12735785 12735826 chr3R 12735897 12735926 7 110 2.0 2.5 2.2 2.2 141 chr3R 12735785 intergenic not near genes chr3R 12735856 intergenic not near genes chr3R 12735926 intergenic not near genes chr3R_7_12735001 chr3R_12735001 RAL-508 1920 chr3R 12763122 12763136 chr3R 12763217 12763233 4 96 0.0 2.0 1.0 2.0 111 chr3R 12763122 intron beat-Vc - chr3R 12763178 intron beat-Vc - chr3R 12763233 intron beat-Vc - chr3R_4_12760001 chr3R_12760001 RAL-508 1921 chr3R 12766388 12766437 chr3R 12766492 12766535 8 96 2.0 1.5 1.8 2.9 147 chr3R 12766388 intron beat-Vc - chr3R 12766462 intron beat-Vc - chr3R 12766535 intron beat-Vc - chr3R_8_12765001 chr3R_12765001 RAL-508 1922 chr3R 12819011 12819047 chr3R 12819114 12819150 12 103 4.0 4.5 4.2 2.3 139 chr3R 12819011 intergenic not near genes chr3R 12819080 intergenic not near genes chr3R 12819150 intergenic not near genes chr3R_12_12815001 chr3R_12815001 RAL-508 1923 chr3R 12825838 12825855 chr3R 12825906 12825936 8 80 1.0 2.5 1.8 2.9 98 chr3R 12825838 intergenic not near genes chr3R 12825887 intergenic not near genes chr3R 12825936 intergenic not near genes chr3R_8_12825001 chr3R_12825001 RAL-508 1924 chr3R 12866473 12866518 chr3R 12866644 12866689 19 170 3.5 5.5 4.5 3.5 216 chr3R 12866473 intergenic not near genes chr3R 12866581 intergenic not near genes chr3R 12866689 intergenic not near genes chr3R_19_12865001 chr3R_12865001 RAL-508 1925 chr3R 12885086 12885133 chr3R 12885213 12885249 15 125 4.0 6.0 5.0 2.5 163 chr3R 12885086 intergenic not near genes chr3R 12885168 intergenic not near genes chr3R 12885249 intergenic not near genes chr3R_15_12885001 chr3R_12885001 RAL-508 1926 chr3R 12894591 12894623 chr3R 12894723 12894756 4 133 0.0 0.0 0.0 4.0 165 chr3R 12894591 intergenic not near genes chr3R 12894674 intergenic not near genes chr3R 12894756 intergenic not near genes chr3R_4_12890001 chr3R_12890001 RAL-508 1927 chr3R 12920138 12920185 chr3R 12925357 12925404 copia 8 5216 3.5 4.5 4.0 1.6 5266 chr3R 12920138 intron beat-Vb + chr3R 12922771 intron beat-Vb + chr3R 12925404 intron beat-Vb + chr3R_8_12920001 chr3R_12920001 RAL-508 1928 chr3R 13073959 13073965 chr3R 13074058 13074060 4 96 1.5 4.0 2.8 1.1 101 chr3R 13073959 intron sim + chr3R 13074010 intron sim + chr3R 13074060 intron sim + chr3R_4_13070001 chr3R_13070001 RAL-508 1929 chr3R 13073968 13074002 chr3R 13074056 13074101 7 97 1.5 2.5 2.0 2.3 133 chr3R 13073968 intron sim + chr3R 13074034 intron sim + chr3R 13074101 exon sim + chr3R_7_13070001 chr3R_13070001 RAL-508 1930 chr3R 13075342 13075369 chr3R 13075443 13075470 8 100 6.0 4.0 5.0 1.3 128 chr3R 13075342 intron sim + chr3R 13075406 intron sim + chr3R 13075470 intron sim + chr3R_8_13075001 chr3R_13075001 RAL-508 1931 chr3R 13104419 13104420 chr3R 21907534 21907536 13 8803115 21.5 22.0 21.8 0.6 8803117 chr3R 13104419 intron timeout + chr3R 17505978 intergenic Dscam3 - chr3R 21907536 intergenic CG6678 + chr3R_13_17505001 chr3R_17505001 RAL-508 1932 chr3R 13135818 13135852 chr3R 13138003 13138037 pogo 5 2184 5.0 4.5 4.8 0.9 2219 chr3R 13135818 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136928 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138037 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_5_13135001 chr3R_13135001 RAL-508 1933 chr3R 13143011 13143059 chr3R 13148608 13148646 mdg3 13 5591 3.0 4.5 3.8 2.7 5635 chr3R 13143011 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145828 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148646 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_13_13145001 chr3R_13145001 RAL-508 1934 chr3R 13210750 13210798 chr3R 13210844 13210895 11 95 2.5 3.5 3.0 2.8 145 chr3R 13210750 intron CG8483 - chr3R 13210822 intron CG8483 - chr3R 13210895 intron CG8483 - chr3R_11_13210001 chr3R_13210001 RAL-508 1935 chr3R 13248637 13248679 chr3R 13248755 13248798 18 118 6.5 4.5 5.5 2.8 161 chr3R 13248637 intron Ace - chr3R 13248718 intron Ace - chr3R 13248798 intron Ace - chr3R_18_13245001 chr3R_13245001 RAL-508 1936 chr3R 13319134 13319188 chr3R 13319357 13319400 10 212 2.5 3.0 2.8 2.6 266 chr3R 13319134 exon CG45080 - chr3R 13319267 5` UTR CG45080 - chr3R 13319400 intergenic CG45080 - chr3R_10_13315001 chr3R_13315001 RAL-508 1937 chr3R 13418656 13418681 chr3R 13418752 13418777 7 96 5.0 3.0 4.0 1.4 121 chr3R 13418656 intergenic not near genes chr3R 13418716 intergenic not near genes chr3R 13418777 intergenic not near genes chr3R_7_13415001 chr3R_13415001 RAL-508 1938 chr3R 13496609 13496661 chr3R 13496708 13496760 8 99 5.5 1.0 3.2 1.9 151 chr3R 13496609 intergenic not near genes chr3R 13496684 intergenic not near genes chr3R 13496760 intergenic not near genes chr3R_8_13495001 chr3R_13495001 RAL-508 1939 chr3R 13505835 13505865 chr3R 13505931 13505961 9 96 6.5 2.5 4.5 1.6 126 chr3R 13505835 intergenic not near genes chr3R 13505898 intergenic not near genes chr3R 13505961 intergenic not near genes chr3R_9_13505001 chr3R_13505001 RAL-508 1940 chr3R 13517209 13517259 chr3R 13520046 13520096 jockey 5 2837 5.0 0.5 2.8 1.3 2887 chr3R 13517209 intergenic not near genes chr3R 13518652 intergenic not near genes chr3R 13520096 intergenic not near genes chr3R_5_13515001 chr3R_13515001 RAL-508 1941 chr3R 13575639 13575683 chr3R 13575916 13575959 10 272 5.0 4.0 4.5 1.8 320 chr3R 13575639 intergenic CR43848 + chr3R 13575799 intergenic CR43848 + chr3R 13575959 intergenic CR43848 + chr3R_10_13575001 chr3R_13575001 RAL-508 1942 chr3R 13598067 13598115 chr3R 13598165 13598213 28 96 3.0 5.5 4.2 5.4 146 chr3R 13598067 intergenic not near genes chr3R 13598140 intergenic not near genes chr3R 13598213 intergenic not near genes chr3R_28_13595001 chr3R_13595001 RAL-508 1943 chr3R 13603035 13603076 chr3R 13603146 13603174 10 110 4.0 3.5 3.8 2.1 139 chr3R 13603035 intergenic not near genes chr3R 13603104 intergenic not near genes chr3R 13603174 intergenic not near genes chr3R_10_13600001 chr3R_13600001 RAL-508 1944 chr3R 13619013 13619062 chr3R 13619137 13619186 16 123 1.0 2.5 1.8 5.7 173 chr3R 13619013 intergenic CR45680 - chr3R 13619100 intergenic not near genes chr3R 13619186 intergenic not near genes chr3R_16_13615001 chr3R_13615001 RAL-508 1945 chr3R 13672924 13672973 chr3R 13673022 13673063 12 96 3.0 4.5 3.8 2.5 139 chr3R 13672924 intron Task6 - chr3R 13672994 intron Task6 - chr3R 13673063 intron Task6 - chr3R_12_13670001 chr3R_13670001 RAL-508 1946 chr3R 13693027 13693028 chr3R 21907534 21907536 14 8214507 13.5 22.0 17.8 0.7 8214509 chr3R 13693027 3` UTR flfl + chr3R 17800282 exon CG17803 - chr3R 21907536 intergenic CG6678 + chr3R_14_17800001 chr3R_17800001 RAL-508 1947 chr3R 13714505 13714537 chr3R 13714664 13714696 5 158 0.0 2.5 1.2 2.3 191 chr3R 13714505 intergenic CR34044 - chr3R 13714600 intergenic CR34044 - chr3R 13714696 intergenic CR34044 - chr3R_5_13710001 chr3R_13710001 RAL-508 1948 chr3R 13738746 13738791 chr3R 13739156 13739202 14 409 4.0 6.0 5.0 2.3 456 chr3R 13738746 intron CG34383 + chr3R 13738974 intron CG34383 + chr3R 13739202 intron CG34383 + chr3R_14_13735001 chr3R_13735001 RAL-508 1949 chr3R 13863665 13863709 chr3R 13863769 13863816 12 98 5.5 3.5 4.5 2.2 151 chr3R 13863665 intergenic not near genes chr3R 13863740 intergenic not near genes chr3R 13863816 intergenic not near genes chr3R_12_13860001 chr3R_13860001 RAL-508 1950 chr3R 14021623 14021656 chr3R 14023466 14023501 S-element 5 1843 7.0 3.0 5.0 0.8 1878 chr3R 14021623 intron rdx - chr3R 14022562 intron rdx - chr3R 14023501 intron rdx - chr3R_5_14020001 chr3R_14020001 RAL-508 1951 chr3R 14029811 14029861 chr3R 14029919 14029969 7 108 3.5 0.0 1.8 2.5 158 chr3R 14029811 intron,exon rdx -,Cyp6d5 + chr3R 14029890 intron,intron rdx -,Cyp6d5 + chr3R 14029969 intron,intron rdx -,Cyp6d5 + chr3R_7_14025001 chr3R_14025001 RAL-508 1952 chr3R 14067127 14067155 chr3R 14067225 14067254 6 99 3.0 0.5 1.8 2.1 127 chr3R 14067127 exon foxo + chr3R 14067190 intron foxo + chr3R 14067254 intron foxo + chr3R_6_14065001 chr3R_14065001 RAL-508 1953 chr3R 14083392 14083414 chr3R 14083511 14083535 8 119 2.5 1.0 1.8 2.9 143 chr3R 14083392 intron foxo + chr3R 14083464 intron foxo + chr3R 14083535 intron foxo + chr3R_8_14080001 chr3R_14080001 RAL-508 1954 chr3R 14093752 14093789 chr3R 14093848 14093884 12 95 2.5 3.5 3.0 3.0 132 chr3R 14093752 intron CCHa1 - chr3R 14093818 intron CCHa1 - chr3R 14093884 intron CCHa1 - chr3R_12_14090001 chr3R_14090001 RAL-508 1955 chr3R 14117426 14117460 chr3R 14117522 14117555 9 95 4.0 4.5 4.2 1.7 129 chr3R 14117426 intron Kif19A - chr3R 14117490 intron Kif19A - chr3R 14117555 intron Kif19A - chr3R_9_14115001 chr3R_14115001 RAL-508 1956 chr3R 14132415 14132444 chr3R 14132548 14132578 4 134 0.0 2.5 1.2 1.8 163 chr3R 14132415 intergenic CG14356 - chr3R 14132496 intergenic CG14356 - chr3R 14132578 intergenic not near genes chr3R_4_14130001 chr3R_14130001 RAL-508 1957 chr3R 14174943 14174949 chr3R 14175044 14175046 4 101 9.5 4.0 6.8 0.5 103 chr3R 14174943 3` UTR Dop1R1 - chr3R 14174994 3` UTR Dop1R1 - chr3R 14175046 3` UTR Dop1R1 - chr3R_4_14170001 chr3R_14170001 RAL-508 1958 chr3R 14174952 14174993 chr3R 14175041 14175081 19 97 3.0 4.0 3.5 4.2 129 chr3R 14174952 3` UTR Dop1R1 - chr3R 14175016 3` UTR Dop1R1 - chr3R 14175081 3` UTR Dop1R1 - chr3R_19_14175001 chr3R_14175001 RAL-508 1959 chr3R 14180792 14180835 chr3R 14185575 14185619 F-element 13 4785 3.0 2.0 2.5 3.7 4827 chr3R 14180792 intron Dop1R1 - chr3R 14183206 intron Dop1R1 - chr3R 14185619 intron Dop1R1 - chr3R_13_14180001 chr3R_14180001 RAL-508 1960 chr3R 14194413 14194427 chr3R 14203582 14203594 roo 7 9169 12.0 4.0 8.0 0.8 9181 chr3R 14194413 intron Dop1R1 - chr3R 14199004 intron Dop1R1 - chr3R 14203594 intron Dop1R1 - chr3R_7_14195001 chr3R_14195001 RAL-508 1961 chr3R 14194430 14194457 chr3R 14203580 14203621 roo 6 9164 5.0 4.0 4.5 1.1 9191 chr3R 14194430 intron Dop1R1 - chr3R 14199026 intron Dop1R1 - chr3R 14203621 intron Dop1R1 - chr3R_6_14195001 chr3R_14195001 RAL-508 1962 chr3R 14246405 14246418 chr3R 14247884 14247933 jockey 8 1501 1.0 4.5 2.8 2.1 1528 chr3R 14246405 intergenic not near genes chr3R 14247169 intergenic not near genes chr3R 14247933 intergenic not near genes chr3R_8_14245001 chr3R_14245001 RAL-508 1963 chr3R 14253686 14253721 chr3R 14253784 14253820 11 96 2.0 5.0 3.5 2.4 134 chr3R 14253686 intron Aats-met - chr3R 14253753 intron Aats-met - chr3R 14253820 intron Aats-met - chr3R_11_14250001 chr3R_14250001 RAL-508 1964 chr3R 14354792 14354841 chr3R 14354903 14354951 5 105 0.0 2.0 1.0 2.5 159 chr3R 14354792 intron NK7.1 - chr3R 14354872 intron NK7.1 - chr3R 14354951 intron NK7.1 - chr3R_5_14350001 chr3R_14350001 RAL-508 1965 chr3R 14527381 14527413 chr3R 14527478 14527510 10 94 7.0 3.0 5.0 1.7 129 chr3R 14527381 intron Pde6 - chr3R 14527446 intron Pde6 - chr3R 14527510 intron Pde6 - chr3R_10_14525001 chr3R_14525001 RAL-508 1966 chr3R 14546056 14546062 chr3R 14546149 14546158 4 96 3.5 1.0 2.2 1.2 102 chr3R 14546056 intron Pde6 - chr3R 14546107 intron Pde6 - chr3R 14546158 intron Pde6 - chr3R_4_14545001 chr3R_14545001 RAL-508 1967 chr3R 14594881 14594930 chr3R 14594989 14595033 19 96 4.5 1.5 3.0 4.8 152 chr3R 14594881 intron stumps + chr3R 14594957 intron stumps + chr3R 14595033 intron stumps + chr3R_19_14590001 chr3R_14590001 RAL-508 1968 chr3R 14608452 14608474 chr3R 14608564 14608586 6 112 2.0 7.5 4.8 1.0 134 chr3R 14608452 intergenic stumps + chr3R 14608519 intergenic stumps + chr3R 14608586 intergenic not near genes chr3R_6_14605001 chr3R_14605001 RAL-508 1969 chr3R 14632035 14632078 chr3R 14632133 14632173 6 98 3.5 2.5 3.0 1.5 138 chr3R 14632035 intron,intron CG7886 -,Cad88C + chr3R 14632104 intron,intron CG7886 -,Cad88C + chr3R 14632173 intron,intron CG7886 -,Cad88C + chr3R_6_14630001 chr3R_14630001 RAL-508 1970 chr3R 14632687 14632703 chr3R 14632772 14632812 6 110 3.0 0.5 1.8 2.1 125 chr3R 14632687 intron,intron CG7886 -,Cad88C + chr3R 14632750 intron,intron CG7886 -,Cad88C + chr3R 14632812 intron,intron CG7886 -,Cad88C + chr3R_6_14630001 chr3R_14630001 RAL-508 1971 chr3R 14704372 14704416 chr3R 14704466 14704492 12 95 4.0 5.5 4.8 2.1 120 chr3R 14704372 intron kibra - chr3R 14704432 intron kibra - chr3R 14704492 intron kibra - chr3R_12_14700001 chr3R_14700001 RAL-508 1972 chr3R 14768966 14768992 chr3R 14769090 14769116 5 122 13.5 11.5 12.5 0.4 150 chr3R 14768966 intron jvl + chr3R 14769041 intron jvl + chr3R 14769116 intron jvl + chr3R_5_14765001 chr3R_14765001 RAL-508 1973 chr3R 14779042 14779095 chr3R 14779143 14779195 14 96 1.5 1.0 1.2 6.4 153 chr3R 14779042 intron jvl + chr3R 14779118 intron jvl + chr3R 14779195 intron jvl + chr3R_14_14775001 chr3R_14775001 RAL-508 1974 chr3R 14806700 14806750 chr3R 14806827 14806879 24 126 4.0 7.5 5.8 3.5 179 chr3R 14806700 3` UTR btsz - chr3R 14806790 3` UTR btsz - chr3R 14806879 3` UTR btsz - chr3R_24_14805001 chr3R_14805001 RAL-508 1975 chr3R 14851733 14851779 chr3R 14851830 14851880 8 100 2.5 0.5 1.5 3.2 147 chr3R 14851733 intron btsz - chr3R 14851806 intron btsz - chr3R 14851880 intron btsz - chr3R_8_14850001 chr3R_14850001 RAL-508 1976 chr3R 14869849 14869856 chr3R 14869960 14869967 4 111 10.5 6.0 8.2 0.4 118 chr3R 14869849 intron btsz - chr3R 14869908 intron btsz - chr3R 14869967 intron btsz - chr3R_4_14865001 chr3R_14865001 RAL-508 1977 chr3R 14869860 14869895 chr3R 14869955 14870006 16 109 3.5 3.5 3.5 3.6 146 chr3R 14869860 intron btsz - chr3R 14869933 intron btsz - chr3R 14870006 intron btsz - chr3R_16_14865001 chr3R_14865001 RAL-508 1978 chr3R 14898456 14898494 chr3R 14898596 14898634 8 140 3.5 4.0 3.8 1.7 178 chr3R 14898456 intergenic Nup93-2 -,CG3817 + chr3R 14898545 intergenic Nup93-2 -,CG3817 + chr3R 14898634 intergenic CG3817 +,Nup93-2 - chr3R_8_14895001 chr3R_14895001 RAL-508 1979 chr3R 14923694 14923743 chr3R 14923789 14923838 12 95 4.5 4.0 4.2 2.3 144 chr3R 14923694 3` UTR CR45598 - chr3R 14923766 intergenic CR45598 - chr3R 14923838 intergenic CR45598 - chr3R_12_14920001 chr3R_14920001 RAL-508 1980 chr3R 14954792 14954838 chr3R 14955022 14955070 11 231 3.0 0.5 1.8 3.9 278 chr3R 14954792 intergenic not near genes chr3R 14954931 intergenic not near genes chr3R 14955070 intergenic not near genes chr3R_11_14950001 chr3R_14950001 RAL-508 1981 chr3R 14995715 14995727 chr3R 14995816 14995832 4 103 3.0 6.0 4.5 0.7 117 chr3R 14995715 intergenic not near genes chr3R 14995774 intergenic not near genes chr3R 14995832 intergenic not near genes chr3R_4_14995001 chr3R_14995001 RAL-508 1982 chr3R 15041398 15041418 chr3R 15045202 15045221 Doc 5 3804 0.0 4.0 2.0 1.7 3823 chr3R 15041398 intergenic not near genes chr3R 15043310 intergenic not near genes chr3R 15045221 intergenic not near genes chr3R_5_15040001 chr3R_15040001 RAL-508 1983 chr3R 15059273 15059479 chr3R 15059470 15059586 BS 10 171 0.0 0.0 0.0 10.0 313 chr3R 15059273 intron dpr9 - chr3R 15059430 intron dpr9 - chr3R 15059586 intron dpr9 - chr3R_10_15055001 chr3R_15055001 RAL-508 1984 chr3R 15075224 15075268 chr3R 15075321 15075371 19 102 3.0 2.5 2.8 5.0 147 chr3R 15075224 intron dpr9 - chr3R 15075298 intron dpr9 - chr3R 15075371 intron dpr9 - chr3R_19_15075001 chr3R_15075001 RAL-508 1985 chr3R 15078327 15078369 chr3R 15078423 15078466 18 99 1.0 0.0 0.5 12.0 139 chr3R 15078327 intergenic CG6974 - chr3R 15078396 intergenic CG6974 - chr3R 15078466 intergenic CG6974 - chr3R_18_15075001 chr3R_15075001 RAL-508 1986 chr3R 15102501 15102528 chr3R 15109779 15109802 412 4 7276 3.0 5.0 4.0 0.8 7301 chr3R 15102501 intron CG42788 - chr3R 15106152 intron CG42788 - chr3R 15109802 intron CG42788 - chr3R_4_15105001 chr3R_15105001 RAL-508 1987 chr3R 15120281 15120315 chr3R 15120843 15120874 7 562 4.0 5.5 4.8 1.2 593 chr3R 15120281 intron CG42788 - chr3R 15120578 intron CG42788 - chr3R 15120874 intron CG42788 - chr3R_7_15120001 chr3R_15120001 RAL-508 1988 chr3R 15132045 15132081 chr3R 15135125 15135161 Juan 15 3080 8.0 10.0 9.0 1.5 3116 chr3R 15132045 intergenic CG42788 - chr3R 15133603 intergenic not near genes chr3R 15135161 3` UTR CG6912 - chr3R_15_15130001 chr3R_15130001 RAL-508 1989 chr3R 15160544 15160590 chr3R 15160662 15160708 10 118 5.0 2.0 3.5 2.2 164 chr3R 15160544 intron Gyc88E + chr3R 15160626 intron Gyc88E + chr3R 15160708 intron Gyc88E + chr3R_10_15160001 chr3R_15160001 RAL-508 1990 chr3R 15190649 15190667 chr3R 15190794 15190812 7 144 0.5 2.5 1.5 2.8 163 chr3R 15190649 3` UTR Gyc88E + chr3R 15190730 3` UTR Gyc88E + chr3R 15190812 3` UTR Gyc88E + chr3R_7_15190001 chr3R_15190001 RAL-508 1991 chr3R 15406130 15406171 chr3R 15406230 15406272 9 99 16.5 13.5 15.0 0.6 142 chr3R 15406130 intron CG6125 - chr3R 15406201 intron CG6125 - chr3R 15406272 intron CG6125 - chr3R_9_15405001 chr3R_15405001 RAL-508 1992 chr3R 15401219 15401238 chr3R 15407861 15407881 5 6642 31.5 24.5 28.0 0.2 6662 chr3R 15401219 3` UTR Rbp + chr3R 15404550 intron CG6125 - chr3R 15407881 intergenic not near genes chr3R_5_15400001 chr3R_15400001 RAL-508 1993 chr3R 15401210 15401264 chr3R 15407886 15407906 6 6649 34.0 24.5 29.2 0.2 6696 chr3R 15401210 3` UTR Rbp + chr3R 15404558 intron CG6125 - chr3R 15407906 intergenic not near genes chr3R_6_15400001 chr3R_15400001 RAL-508 1994 chr3R 15416246 15416274 chr3R 15416328 15416374 12 95 1.5 5.5 3.5 2.7 128 chr3R 15416246 3` UTR Atx2 + chr3R 15416310 3` UTR Atx2 + chr3R 15416374 3` UTR Atx2 + chr3R_12_15415001 chr3R_15415001 RAL-508 1995 chr3R 15473606 15473621 chr3R 15473703 15473718 5 96 12.0 9.0 10.5 0.4 112 chr3R 15473606 intron AdamTS-A - chr3R 15473662 intron AdamTS-A - chr3R 15473718 intron AdamTS-A - chr3R_5_15470001 chr3R_15470001 RAL-508 1996 chr3R 15581032 15581054 chr3R 15581142 15581165 4 110 6.0 4.5 5.2 0.6 133 chr3R 15581032 intergenic not near genes chr3R 15581098 intergenic not near genes chr3R 15581165 intergenic not near genes chr3R_4_15580001 chr3R_15580001 RAL-508 1997 chr3R 15592882 15592923 chr3R 15592985 15593027 15 104 2.5 1.5 2.0 5.0 145 chr3R 15592882 intergenic not near genes chr3R 15592954 intergenic not near genes chr3R 15593027 intergenic not near genes chr3R_15_15590001 chr3R_15590001 RAL-508 1998 chr3R 15594657 15594674 chr3R 15594760 15594776 7 101 0.0 6.5 3.2 1.7 119 chr3R 15594657 intergenic not near genes chr3R 15594716 intergenic not near genes chr3R 15594776 intergenic not near genes chr3R_7_15590001 chr3R_15590001 RAL-508 1999 chr3R 15601172 15601177 chr3R 15608692 15608718 412 8 7538 9.0 5.5 7.2 1.0 7546 chr3R 15601172 intergenic not near genes chr3R 15604945 intergenic not near genes chr3R 15608718 intergenic not near genes chr3R_8_15600001 chr3R_15600001 RAL-508 2000 chr3R 15601178 15601196 chr3R 15608687 15608720 412 10 7535 5.5 4.5 5.0 1.7 7542 chr3R 15601178 intergenic not near genes chr3R 15604949 intergenic not near genes chr3R 15608720 intergenic not near genes chr3R_10_15600001 chr3R_15600001 RAL-508 2001 chr3R 15618716 15618760 chr3R 15626210 15626254 blood 14 7492 3.0 9.0 6.0 2.0 7538 chr3R 15618716 intergenic not near genes chr3R 15622485 intergenic not near genes chr3R 15626254 intergenic not near genes chr3R_14_15620001 chr3R_15620001 RAL-508 2002 chr3R 15635189 15635234 chr3R 15635330 15635366 7 137 0.0 4.0 2.0 2.3 177 chr3R 15635189 intergenic CG43335 + chr3R 15635278 intergenic CG43335 + chr3R 15635366 intergenic CG43335 + chr3R_7_15635001 chr3R_15635001 RAL-508 2003 chr3R 15646775 15646798 chr3R 15646878 15646901 9 103 3.5 4.0 3.8 1.9 126 chr3R 15646775 intergenic not near genes chr3R 15646838 intergenic not near genes chr3R 15646901 intergenic not near genes chr3R_9_15645001 chr3R_15645001 RAL-508 2004 chr3R 15691167 15691325 chr3R 15691286 15691432 23 112 0.0 0.0 0.0 23.0 265 chr3R 15691167 intergenic not near genes chr3R 15691300 intergenic not near genes chr3R 15691432 intergenic not near genes chr3R_23_15690001 chr3R_15690001 RAL-508 2005 chr3R 15715786 15715833 chr3R 15715890 15715938 12 102 6.0 5.0 5.5 1.8 152 chr3R 15715786 exon CG31294 - chr3R 15715862 intron CG31294 - chr3R 15715938 exon CG31294 - chr3R_12_15715001 chr3R_15715001 RAL-508 2006 chr3R 15779634 15779679 chr3R 15779735 15779779 8 100 2.5 3.5 3.0 2.0 145 chr3R 15779634 intergenic CG5614 + chr3R 15779706 intergenic CG5614 + chr3R 15779779 intergenic CG5614 + chr3R_8_15775001 chr3R_15775001 RAL-508 2007 chr3R 15783723 15783762 chr3R 15784019 15784062 21 299 3.0 4.0 3.5 4.7 339 chr3R 15783723 intergenic not near genes chr3R 15783892 intergenic not near genes chr3R 15784062 intergenic not near genes chr3R_21_15780001 chr3R_15780001 RAL-508 2008 chr3R 15868919 15868936 chr3R 15869019 15869036 6 100 5.5 0.0 2.8 1.6 117 chr3R 15868919 intron CG31183 - chr3R 15868978 intron CG31183 - chr3R 15869036 intron CG31183 - chr3R_6_15865001 chr3R_15865001 RAL-508 2009 chr3R 16189391 16189421 chr3R 16189814 16189844 invader4 8 422 5.5 2.5 4.0 1.6 453 chr3R 16189391 intron sra + chr3R 16189618 intron sra + chr3R 16189844 intron sra + chr3R_8_16185001 chr3R_16185001 RAL-508 2010 chr3R 16225072 16225119 chr3R 16225177 16225224 7 103 3.5 3.0 3.2 1.7 152 chr3R 16225072 intergenic not near genes chr3R 16225148 intergenic not near genes chr3R 16225224 intergenic tara + chr3R_7_16225001 chr3R_16225001 RAL-508 2011 chr3R 16241764 16241819 chr3R 16242045 16242102 19 281 4.0 2.5 3.2 4.5 338 chr3R 16241764 intron tara + chr3R 16241933 intron tara + chr3R 16242102 intron tara + chr3R_19_16240001 chr3R_16240001 RAL-508 2012 chr3R 16246525 16246543 chr3R 16246621 16246639 5 96 0.0 6.5 3.2 1.2 114 chr3R 16246525 intron tara + chr3R 16246582 intron tara + chr3R 16246639 intron tara + chr3R_5_16245001 chr3R_16245001 RAL-508 2013 chr3R 16374282 16374317 chr3R 16374419 16374454 8 136 4.5 4.5 4.5 1.5 172 chr3R 16374282 intergenic ss - chr3R 16374368 intergenic ss - chr3R 16374454 3` UTR ss - chr3R_8_16370001 chr3R_16370001 RAL-508 2014 chr3R 16517498 16517548 chr3R 16517802 16517834 8 298 1.5 2.5 2.0 2.7 336 chr3R 16517498 intron CG42342 + chr3R 16517666 intron CG42342 + chr3R 16517834 intron CG42342 + chr3R_8_16515001 chr3R_16515001 RAL-508 2015 chr3R 16582889 16582916 chr3R 16582988 16583015 4 98 8.5 5.0 6.8 0.5 126 chr3R 16582889 intron Scp2 - chr3R 16582952 intron Scp2 - chr3R 16583015 intron Scp2 - chr3R_4_16580001 chr3R_16580001 RAL-508 2016 chr3R 16701954 16701985 chr3R 16702063 16702088 5 105 0.5 4.0 2.2 1.6 134 chr3R 16701954 intron Ubx - chr3R 16702021 intron Ubx - chr3R 16702088 intron Ubx - chr3R_5_16700001 chr3R_16700001 RAL-508 2017 chr3R 16732129 16732175 chr3R 16732245 16732291 11 116 0.5 2.0 1.2 5.0 162 chr3R 16732129 intron Ubx - chr3R 16732210 intron Ubx - chr3R 16732291 intron Ubx - chr3R_11_16730001 chr3R_16730001 RAL-508 2018 chr3R 16756306 16756321 chr3R 16762517 16762517 diver 4 6207 6.5 2.0 4.2 0.8 6211 chr3R 16756306 intron bxd - chr3R 16759412 intron bxd - chr3R 16762517 intron bxd - chr3R_4_16755001 chr3R_16755001 RAL-508 2019 chr3R 16756336 16756350 chr3R 16762512 16762544 diver 7 6190 3.0 2.0 2.5 2.0 6208 chr3R 16756336 intron bxd - chr3R 16759440 intron bxd - chr3R 16762544 intron bxd - chr3R_7_16755001 chr3R_16755001 RAL-508 2020 chr3R 16836943 16836987 chr3R 16837292 16837335 20 347 3.5 2.5 3.0 5.0 392 chr3R 16836943 intron iab-8 - chr3R 16837139 intron iab-8 - chr3R 16837335 intron iab-8 - chr3R_20_16835001 chr3R_16835001 RAL-508 2021 chr3R 17121510 17121556 chr3R 17121725 17121759 15 213 3.5 1.5 2.5 4.3 249 chr3R 17121510 intron cher - chr3R 17121634 intron,exon cher -,CG42779 + chr3R 17121759 intron,exon cher -,CG42779 + chr3R_15_17120001 chr3R_17120001 RAL-508 2022 chr3R 17290429 17290470 chr3R 17290535 17290576 12 104 2.5 5.0 3.8 2.5 147 chr3R 17290429 intergenic not near genes chr3R 17290502 intergenic not near genes chr3R 17290576 intergenic not near genes chr3R_12_17290001 chr3R_17290001 RAL-508 2023 chr3R 17294654 17294702 chr3R 17295102 17295128 BS 9 443 1.0 5.5 3.2 2.1 474 chr3R 17294654 intergenic not near genes chr3R 17294891 intergenic not near genes chr3R 17295128 intergenic not near genes chr3R_9_17290001 chr3R_17290001 RAL-508 2024 chr3R 17346686 17346705 chr3R 17348267 17348288 F-element 8 1583 2.0 9.0 5.5 1.2 1602 chr3R 17346686 intron beat-IIa - chr3R 17347487 intron beat-IIa - chr3R 17348288 intron beat-IIa - chr3R_8_17345001 chr3R_17345001 RAL-508 2025 chr3R 17355471 17355521 chr3R 17355567 17355600 12 95 7.0 4.5 5.8 1.8 129 chr3R 17355471 intron beat-IIa - chr3R 17355536 intron beat-IIa - chr3R 17355600 intron beat-IIa - chr3R_12_17355001 chr3R_17355001 RAL-508 2026 chr3R 17461180 17461229 chr3R 17461282 17461331 11 102 1.0 2.5 1.8 3.9 151 chr3R 17461180 intergenic not near genes chr3R 17461256 intergenic not near genes chr3R 17461331 intergenic not near genes chr3R_11_17460001 chr3R_17460001 RAL-508 2027 chr3R 17497925 17497992 chr3R 17498051 17498098 11 122 0.0 3.5 1.8 3.9 173 chr3R 17497925 intron Dscam3 - chr3R 17498012 intron Dscam3 - chr3R 17498098 intron Dscam3 - chr3R_11_17495001 chr3R_17495001 RAL-508 2028 chr3R 17521582 17521589 chr3R 17521738 17521768 6 169 0.0 5.5 2.8 1.6 186 chr3R 17521582 intergenic not near genes chr3R 17521675 intergenic not near genes chr3R 17521768 intergenic not near genes chr3R_6_17520001 chr3R_17520001 RAL-508 2029 chr3R 17522195 17522206 chr3R 17522308 17522319 5 112 8.0 0.0 4.0 1.0 124 chr3R 17522195 intergenic not near genes chr3R 17522257 intergenic not near genes chr3R 17522319 intergenic not near genes chr3R_5_17520001 chr3R_17520001 RAL-508 2030 chr3R 17560285 17560319 chr3R 17560664 17560698 14 377 1.5 6.0 3.8 2.9 413 chr3R 17560285 intron Hmx + chr3R 17560492 intron Hmx + chr3R 17560698 intron Hmx + chr3R_14_17560001 chr3R_17560001 RAL-508 2031 chr3R 17584837 17584881 chr3R 17585025 17585028 10 182 5.0 3.5 4.2 1.9 191 chr3R 17584837 intergenic not near genes chr3R 17584932 intergenic not near genes chr3R 17585028 intergenic not near genes chr3R_10_17580001 chr3R_17580001 RAL-508 2032 chr3R 17591282 17591323 chr3R 17591721 17591735 F-element 7 443 4.0 5.5 4.8 1.2 453 chr3R 17591282 intergenic not near genes chr3R 17591508 intergenic not near genes chr3R 17591735 intergenic not near genes chr3R_7_17590001 chr3R_17590001 RAL-508 2033 chr3R 17734105 17734131 chr3R 17734214 17734240 5 109 4.5 4.0 4.2 1.0 135 chr3R 17734105 3` UTR CG14321 + chr3R 17734172 3` UTR CG14321 + chr3R 17734240 3` UTR CG14321 + chr3R_5_17730001 chr3R_17730001 RAL-508 2034 chr3R 17811185 17811205 chr3R 17811285 17811305 4 99 7.0 0.0 3.5 0.9 120 chr3R 17811185 intergenic CG18012 -,tinc + chr3R 17811245 intergenic CG18012 -,tinc + chr3R 17811305 intergenic CG18012 -,tinc + chr3R_4_17810001 chr3R_17810001 RAL-508 2035 chr3R 17823189 17823220 chr3R 17823294 17823325 5 105 2.5 3.0 2.8 1.3 136 chr3R 17823189 intron tinc + chr3R 17823257 intron tinc + chr3R 17823325 intron tinc + chr3R_5_17820001 chr3R_17820001 RAL-508 2036 chr3R 17913108 17913138 chr3R 17913218 17913253 9 114 6.0 2.0 4.0 1.8 145 chr3R 17913108 intron Rim - chr3R 17913180 intron Rim - chr3R 17913253 intron Rim - chr3R_9_17910001 chr3R_17910001 RAL-508 2037 chr3R 17925845 17925866 chr3R 17927326 17927350 hobo 7 1485 11.0 6.0 8.5 0.7 1505 chr3R 17925845 intron cpo + chr3R 17926598 intron cpo + chr3R 17927350 intron cpo + chr3R_7_17925001 chr3R_17925001 RAL-508 2038 chr3R 17925868 17925887 chr3R 17927328 17927328 hobo 8 1477 5.5 6.0 5.8 1.2 1460 chr3R 17925868 intron cpo + chr3R 17926598 intron cpo + chr3R 17927328 intron cpo + chr3R_8_17925001 chr3R_17925001 RAL-508 2039 chr3R 17978731 17978785 chr3R 17978831 17978857 19 94 2.5 4.5 3.5 4.2 126 chr3R 17978731 intron cpo + chr3R 17978794 intron cpo + chr3R 17978857 intron cpo + chr3R_19_17975001 chr3R_17975001 RAL-508 2040 chr3R 18061426 18061441 chr3R 18061537 18061553 5 110 3.0 0.0 1.5 2.0 127 chr3R 18061426 intergenic not near genes chr3R 18061490 intergenic not near genes chr3R 18061553 intergenic not near genes chr3R_5_18060001 chr3R_18060001 RAL-508 2041 chr3R 18061553 18061616 chr3R 18063146 18063202 F-element 5 1591 0.0 0.0 0.0 5.0 1649 chr3R 18061553 intergenic not near genes chr3R 18062378 intergenic not near genes chr3R 18063202 intergenic not near genes chr3R_5_18060001 chr3R_18060001 RAL-508 2042 chr3R 18068007 18068014 chr3R 18068107 18068116 4 101 0.0 3.0 1.5 1.6 109 chr3R 18068007 intergenic not near genes chr3R 18068062 intergenic not near genes chr3R 18068116 intergenic not near genes chr3R_4_18065001 chr3R_18065001 RAL-508 2043 chr3R 18078138 18078184 chr3R 18078237 18078283 12 99 2.5 2.5 2.5 3.4 145 chr3R 18078138 intergenic not near genes chr3R 18078210 intergenic not near genes chr3R 18078283 intergenic not near genes chr3R_12_18075001 chr3R_18075001 RAL-508 2044 chr3R 18112352 18112394 chr3R 18112455 18112497 9 103 1.5 1.0 1.2 4.1 145 chr3R 18112352 intron sr + chr3R 18112424 intron sr + chr3R 18112497 intron sr + chr3R_9_18110001 chr3R_18110001 RAL-508 2045 chr3R 18140422 18140437 chr3R 18140520 18140535 7 96 8.0 6.5 7.2 0.9 113 chr3R 18140422 intergenic not near genes chr3R 18140478 intergenic not near genes chr3R 18140535 intergenic not near genes chr3R_7_18140001 chr3R_18140001 RAL-508 2046 chr3R 18140444 18140474 chr3R 18140519 18140570 6 89 1.5 6.5 4.0 1.2 126 chr3R 18140444 intergenic not near genes chr3R 18140507 intergenic not near genes chr3R 18140570 intergenic not near genes chr3R_6_18140001 chr3R_18140001 RAL-508 2047 chr3R 18215753 18215758 chr3R 18215933 18215946 4 186 0.5 6.0 3.2 1.0 193 chr3R 18215753 intergenic CG14314 + chr3R 18215850 intergenic CG14314 + chr3R 18215946 intergenic CG14314 + chr3R_4_18215001 chr3R_18215001 RAL-508 2048 chr3R 18235197 18235245 chr3R 18235390 18235439 15 187 3.5 3.5 3.5 3.3 242 chr3R 18235197 intergenic not near genes chr3R 18235318 intergenic not near genes chr3R 18235439 intergenic not near genes chr3R_15_18235001 chr3R_18235001 RAL-508 2049 chr3R 18338980 18339013 chr3R 18339103 18339137 5 123 0.0 0.0 0.0 5.0 157 chr3R 18338980 intron CG15803 - chr3R 18339058 intron CG15803 - chr3R 18339137 intron CG15803 - chr3R_5_18335001 chr3R_18335001 RAL-508 2050 chr3R 18341174 18341219 chr3R 18341296 18341318 8 114 0.5 5.0 2.8 2.1 144 chr3R 18341174 intron CG15803 - chr3R 18341246 intron CG15803 - chr3R 18341318 intron CG15803 - chr3R_8_18340001 chr3R_18340001 RAL-508 2051 chr3R 18498168 18498188 chr3R 18498264 18498284 6 95 0.5 2.0 1.2 2.7 116 chr3R 18498168 intron fru - chr3R 18498226 intron fru - chr3R 18498284 intron fru - chr3R_6_18495001 chr3R_18495001 RAL-508 2052 chr3R 18615351 18615400 chr3R 18615460 18615509 10 109 1.5 1.5 1.5 4.0 158 chr3R 18615351 intron,intron qin +,CG14304 - chr3R 18615430 intron,intron qin +,CG14304 - chr3R 18615509 intron,intron qin +,CG14304 - chr3R_10_18615001 chr3R_18615001 RAL-508 2053 chr3R 18628863 18629034 chr3R 18629006 18629144 11 125 0.0 0.0 0.0 11.0 281 chr3R 18628863 intron qin + chr3R 18629004 intron qin + chr3R 18629144 intron qin + chr3R_11_18625001 chr3R_18625001 RAL-508 2054 chr3R 18635212 18635225 chr3R 18635309 18635347 6 117 4.0 3.0 3.5 1.3 135 chr3R 18635212 intron,intron qin +,CG14301 - chr3R 18635280 intron,intron qin +,CG14301 - chr3R 18635347 intron,intron qin +,CG14301 - chr3R_6_18635001 chr3R_18635001 RAL-508 2055 chr3R 18695740 18695755 chr3R 18695845 18695858 7 103 3.5 0.0 1.8 2.5 118 chr3R 18695740 3` UTR CG34282 + chr3R 18695799 intergenic CG34282 + chr3R 18695858 intergenic CG34282 + chr3R_7_18695001 chr3R_18695001 RAL-508 2056 chr3R 18703270 18703289 chr3R 18703398 18703417 4 128 4.5 0.0 2.2 1.2 147 chr3R 18703270 intergenic not near genes chr3R 18703344 intergenic not near genes chr3R 18703417 intergenic not near genes chr3R_4_18700001 chr3R_18700001 RAL-508 2057 chr3R 18730022 18730035 chr3R 18730104 18730113 5 86 3.5 1.5 2.5 1.4 91 chr3R 18730022 intron Cha + chr3R 18730068 intron Cha + chr3R 18730113 exon Cha + chr3R_5_18730001 chr3R_18730001 RAL-508 2058 chr3R 18766756 18766805 chr3R 18766854 18766903 15 97 4.0 2.5 3.2 3.6 147 chr3R 18766756 intron CG7720 - chr3R 18766830 intron CG7720 - chr3R 18766903 intron CG7720 - chr3R_15_18765001 chr3R_18765001 RAL-508 2059 chr3R 18770280 18770322 chr3R 18770380 18770423 12 101 2.0 3.0 2.5 3.4 143 chr3R 18770280 intron CG7720 - chr3R 18770352 intron CG7720 - chr3R 18770423 intron CG7720 - chr3R_12_18770001 chr3R_18770001 RAL-508 2060 chr3R 18784905 18784938 chr3R 18785019 18785052 5 113 2.0 5.0 3.5 1.1 147 chr3R 18784905 intron CG7720 - chr3R 18784978 intron CG7720 - chr3R 18785052 intron CG7720 - chr3R_5_18780001 chr3R_18780001 RAL-508 2061 chr3R 18802116 18802154 chr3R 18802221 18802259 17 104 6.0 6.0 6.0 2.4 143 chr3R 18802116 3` UTR CG18208 - chr3R 18802188 3` UTR CG18208 - chr3R 18802259 3` UTR CG18208 - chr3R_17_18800001 chr3R_18800001 RAL-508 2062 chr3R 18807313 18807329 chr3R 18807410 18807426 7 96 1.5 0.0 0.8 3.9 113 chr3R 18807313 intron CG18208 - chr3R 18807370 intron CG18208 - chr3R 18807426 intron CG18208 - chr3R_7_18805001 chr3R_18805001 RAL-508 2063 chr3R 18812072 18812105 chr3R 18812170 18812202 14 98 4.5 8.5 6.5 1.9 130 chr3R 18812072 intron CG18208 - chr3R 18812137 intron CG18208 - chr3R 18812202 intron CG18208 - chr3R_14_18810001 chr3R_18810001 RAL-508 2064 chr3R 18817498 18817527 chr3R 18817614 18817645 11 116 0.0 0.0 0.0 11.0 147 chr3R 18817498 intron CG18208 - chr3R 18817572 intron CG18208 - chr3R 18817645 intron CG18208 - chr3R_11_18815001 chr3R_18815001 RAL-508 2065 chr3R 18822542 18822582 chr3R 18822806 18822815 5 258 8.5 3.5 6.0 0.7 273 chr3R 18822542 intron CG18208 - chr3R 18822678 intron CG18208 - chr3R 18822815 intron CG18208 - chr3R_5_18820001 chr3R_18820001 RAL-508 2066 chr3R 18877997 18878040 chr3R 18878142 18878169 7 142 0.5 2.0 1.2 3.2 172 chr3R 18877997 intergenic not near genes chr3R 18878083 intergenic not near genes chr3R 18878169 intergenic not near genes chr3R_7_18875001 chr3R_18875001 RAL-508 2067 chr3R 18887582 18887597 chr3R 18887683 18887698 6 99 8.0 3.5 5.8 0.9 116 chr3R 18887582 intergenic not near genes chr3R 18887640 intergenic not near genes chr3R 18887698 intergenic not near genes chr3R_6_18885001 chr3R_18885001 RAL-508 2068 chr3R 18965200 18965235 chr3R 18965393 18965448 14 200 2.5 4.5 3.5 3.1 248 chr3R 18965200 intron,intron CG42613 +,CG43732 + chr3R 18965324 intron,intron CG42613 +,CG43732 + chr3R 18965448 intron,intron CG42613 +,CG43732 + chr3R_14_18965001 chr3R_18965001 RAL-508 2069 chr3R 19013003 19013052 chr3R 19013107 19013155 10 103 4.5 1.0 2.8 2.6 152 chr3R 19013003 intron gukh + chr3R 19013079 intron gukh + chr3R 19013155 intron gukh + chr3R_10_19010001 chr3R_19010001 RAL-508 2070 chr3R 19272548 19272563 chr3R 19272795 19272810 8 246 9.0 3.0 6.0 1.1 262 chr3R 19272548 intergenic not near genes chr3R 19272679 intergenic not near genes chr3R 19272810 intergenic not near genes chr3R_8_19270001 chr3R_19270001 RAL-508 2071 chr3R 19272578 19272595 chr3R 19272792 19272839 6 239 4.5 2.0 3.2 1.4 261 chr3R 19272578 intergenic not near genes chr3R 19272708 intergenic not near genes chr3R 19272839 intergenic not near genes chr3R_6_19270001 chr3R_19270001 RAL-508 2072 chr3R 19276922 19276936 chr3R 19277022 19277036 4 100 6.0 0.5 3.2 1.0 114 chr3R 19276922 intergenic not near genes chr3R 19276979 intergenic not near genes chr3R 19277036 intergenic not near genes chr3R_4_19275001 chr3R_19275001 RAL-508 2073 chr3R 19344647 19344698 chr3R 19344802 19344853 9 154 2.0 1.5 1.8 3.2 206 chr3R 19344647 intergenic not near genes chr3R 19344750 intergenic not near genes chr3R 19344853 intergenic not near genes chr3R_9_19340001 chr3R_19340001 RAL-508 2074 chr3R 19570292 19570338 chr3R 19570386 19570434 16 94 4.0 6.0 5.0 2.7 142 chr3R 19570292 intron Dys + chr3R 19570363 intron Dys + chr3R 19570434 intron Dys + chr3R_16_19570001 chr3R_19570001 RAL-508 2075 chr3R 19604656 19604709 chr3R 19604809 19604862 16 149 4.5 4.5 4.5 2.9 206 chr3R 19604656 exon CG7342 + chr3R 19604759 intron CG7342 + chr3R 19604862 intron CG7342 + chr3R_16_19600001 chr3R_19600001 RAL-508 2076 chr3R 19611993 19612011 chr3R 19616010 19616040 6 4017 21.5 18.5 20.0 0.3 4047 chr3R 19611993 exon CG17752 + chr3R 19614016 exon CG16727 + chr3R 19616040 3` UTR CG6231 - chr3R_6_19610001 chr3R_19610001 RAL-508 2077 chr3R 19702301 19702352 chr3R 19702403 19702421 9 98 2.0 5.5 3.8 1.9 120 chr3R 19702301 intergenic not near genes chr3R 19702361 intergenic not near genes chr3R 19702421 intergenic not near genes chr3R_9_19700001 chr3R_19700001 RAL-508 2078 chr3R 19718929 19718935 chr3R 19719029 19719035 4 100 0.0 3.5 1.8 1.4 106 chr3R 19718929 intergenic not near genes chr3R 19718982 intergenic not near genes chr3R 19719035 intergenic not near genes chr3R_4_19715001 chr3R_19715001 RAL-508 2079 chr3R 19827506 19827557 chr3R 19827612 19827663 10 106 2.5 1.0 1.8 3.6 157 chr3R 19827506 intron bnl - chr3R 19827584 intron bnl - chr3R 19827663 exon bnl - chr3R_10_19825001 chr3R_19825001 RAL-508 2080 chr3R 19846940 19846969 chr3R 19847120 19847149 7 179 5.5 0.0 2.8 1.8 209 chr3R 19846940 intergenic CG4662 + chr3R 19847044 intergenic CG4662 + chr3R 19847149 intergenic CG4662 + chr3R_7_19845001 chr3R_19845001 RAL-508 2081 chr3R 19859949 19859994 chr3R 19860046 19860088 15 96 2.5 5.0 3.8 3.1 139 chr3R 19859949 intron Ire1 - chr3R 19860018 intron Ire1 - chr3R 19860088 intron Ire1 - chr3R_15_19860001 chr3R_19860001 RAL-508 2082 chr3R 19913992 19914045 chr3R 19914105 19914158 22 113 5.5 3.0 4.2 4.2 166 chr3R 19913992 3` UTR RhoGAP92B + chr3R 19914075 3` UTR RhoGAP92B + chr3R 19914158 3` UTR RhoGAP92B + chr3R_22_19910001 chr3R_19910001 RAL-508 2083 chr3R 19920534 19920568 chr3R 19921880 19921903 5 1341 3.5 4.0 3.8 1.0 1369 chr3R 19920534 3` UTR CG4770 + chr3R 19921218 3` UTR CR43282 - chr3R 19921903 3` UTR CG4462 - chr3R_5_19920001 chr3R_19920001 RAL-508 2084 chr3R 20041122 20041147 chr3R 20041213 20041218 7 108 0.5 4.0 2.2 2.2 96 chr3R 20041122 intron CG17193 - chr3R 20041170 intron CG17193 - chr3R 20041218 intron CG17193 - chr3R_7_20040001 chr3R_20040001 RAL-508 2085 chr3R 20109517 20109567 chr3R 20114741 20114766 copia 6 5216 1.0 4.0 2.5 1.7 5249 chr3R 20109517 intergenic not near genes chr3R 20112142 intergenic not near genes chr3R 20114766 intergenic CG10887 + chr3R_6_20110001 chr3R_20110001 RAL-508 2086 chr3R 20156677 20156719 chr3R 20165867 20165909 roo 7 9190 7.0 9.0 8.0 0.8 9232 chr3R 20156677 intergenic not near genes chr3R 20161293 intergenic not near genes chr3R 20165909 intergenic not near genes chr3R_7_20160001 chr3R_20160001 RAL-508 2087 chr3R 20205547 20205595 chr3R 20205689 20205737 7 142 2.5 2.5 2.5 2.0 190 chr3R 20205547 intron Nlg4 + chr3R 20205642 intron Nlg4 + chr3R 20205737 intron Nlg4 + chr3R_7_20205001 chr3R_20205001 RAL-508 2088 chr3R 20237181 20237222 chr3R 20237275 20237314 11 92 2.5 2.5 2.5 3.1 133 chr3R 20237181 intron Nlg4 + chr3R 20237248 intron Nlg4 + chr3R 20237314 intron Nlg4 + chr3R_11_20235001 chr3R_20235001 RAL-508 2089 chr3R 20245270 20245300 chr3R 20248895 20248929 F-element 5 3629 1.0 0.0 0.5 3.3 3659 chr3R 20245270 3` UTR Nlg4 + chr3R 20247100 intergenic not near genes chr3R 20248929 intergenic not near genes chr3R_5_20245001 chr3R_20245001 RAL-508 2090 chr3R 20252229 20252240 chr3R 20252327 20252338 5 98 0.0 0.0 0.0 5.0 109 chr3R 20252229 intergenic not near genes chr3R 20252284 intergenic cic + chr3R 20252338 intergenic cic + chr3R_5_20250001 chr3R_20250001 RAL-508 2091 chr3R 20256846 20256869 chr3R 20256944 20256967 4 98 0.0 10.5 5.2 0.6 121 chr3R 20256846 intron cic + chr3R 20256906 intron cic + chr3R 20256967 intron cic + chr3R_4_20255001 chr3R_20255001 RAL-508 2092 chr3R 20266501 20266544 chr3R 20272992 20273034 Burdock 13 6490 5.0 6.5 5.8 1.9 6533 chr3R 20266501 intron cic + chr3R 20269768 intron cic + chr3R 20273034 intron cic + chr3R_13_20265001 chr3R_20265001 RAL-508 2093 chr3R 20282259 20282303 chr3R 20282355 20282399 10 96 0.0 4.5 2.2 3.1 140 chr3R 20282259 intron cic + chr3R 20282329 intron cic + chr3R 20282399 intron cic + chr3R_10_20280001 chr3R_20280001 RAL-508 2094 chr3R 20308963 20309012 chr3R 20309058 20309086 10 92 4.5 4.0 4.2 1.9 123 chr3R 20308963 intergenic CG42668 + chr3R 20309024 intergenic CG42668 + chr3R 20309086 intergenic CG42668 + chr3R_10_20305001 chr3R_20305001 RAL-508 2095 chr3R 20330987 20331019 chr3R 20331492 20331525 roo 5 506 4.0 0.5 2.2 1.6 538 chr3R 20330987 intergenic Sirt2 + chr3R 20331256 intergenic Sirt2 + chr3R 20331525 intergenic not near genes chr3R_5_20330001 chr3R_20330001 RAL-508 2096 chr3R 20465590 20465637 chr3R 20465712 20465758 13 121 2.5 4.5 3.5 2.9 168 chr3R 20465590 intron Gfrl - chr3R 20465674 intron Gfrl - chr3R 20465758 intron Gfrl - chr3R_13_20465001 chr3R_20465001 RAL-508 2097 chr3R 20469266 20469446 chr3R 20469383 20469544 5 108 1.0 0.0 0.5 3.3 278 chr3R 20469266 intron Gfrl - chr3R 20469405 intron Gfrl - chr3R 20469544 intron Gfrl - chr3R_5_20465001 chr3R_20465001 RAL-508 2098 chr3R 20472726 20472755 chr3R 20472798 20472829 7 81 0.5 5.5 3.0 1.8 103 chr3R 20472726 intron Gfrl - chr3R 20472778 intron Gfrl - chr3R 20472829 intron Gfrl - chr3R_7_20470001 chr3R_20470001 RAL-508 2099 chr3R 20498461 20498497 chr3R 20498563 20498599 11 102 2.5 0.5 1.5 4.4 138 chr3R 20498461 intergenic not near genes chr3R 20498530 intergenic not near genes chr3R 20498599 intergenic not near genes chr3R_11_20495001 chr3R_20495001 RAL-508 2100 chr3R 20506572 20506612 chr3R 20507395 20507429 BS 18 821 4.0 2.0 3.0 4.5 857 chr3R 20506572 intergenic Or92a + chr3R 20507000 intergenic CG4288 - chr3R 20507429 3` UTR CG4288 - chr3R_18_20505001 chr3R_20505001 RAL-508 2101 chr3R 20512991 20513028 chr3R 20515715 20515751 opus 5 2724 0.5 0.5 0.5 3.3 2760 chr3R 20512991 intergenic not near genes chr3R 20514371 intergenic not near genes chr3R 20515751 intergenic not near genes chr3R_5_20510001 chr3R_20510001 RAL-508 2102 chr3R 20594461 20594512 chr3R 20594571 20594622 5 110 1.5 0.0 0.8 2.8 161 chr3R 20594461 intron bon + chr3R 20594542 intron bon + chr3R 20594622 intron bon + chr3R_5_20590001 chr3R_20590001 RAL-508 2103 chr3R 20739577 20739586 chr3R 20739715 20739723 5 138 1.5 5.0 3.2 1.2 146 chr3R 20739577 intergenic CG17267 - chr3R 20739650 intergenic CG42322 + chr3R 20739723 intergenic CG42322 + chr3R_5_20735001 chr3R_20735001 RAL-508 2104 chr3R 20771709 20771731 chr3R 20771799 20771837 7 100 0.0 5.5 2.8 1.8 128 chr3R 20771709 intron,intron Syp +,Takl1 - chr3R 20771773 intron,intron Syp +,Takl1 - chr3R 20771837 intron,exon Syp +,Takl1 - chr3R_7_20770001 chr3R_20770001 RAL-508 2105 chr3R 20787424 20787447 chr3R 20787535 20787558 7 110 6.0 4.5 5.2 1.1 134 chr3R 20787424 intron Syp + chr3R 20787491 intron Syp + chr3R 20787558 intron Syp + chr3R_7_20785001 chr3R_20785001 RAL-508 2106 chr3R 20787452 20787458 chr3R 20787531 20787569 4 103 3.5 3.5 3.5 0.9 117 chr3R 20787452 intron Syp + chr3R 20787510 intron Syp + chr3R 20787569 intron Syp + chr3R_4_20785001 chr3R_20785001 RAL-508 2107 chr3R 20854464 20854508 chr3R 20859268 20859307 Doc 5 4801 1.5 4.5 3.0 1.2 4843 chr3R 20854464 intron Ir93a - chr3R 20856886 intron Ir93a - chr3R 20859307 exon Ir93a - chr3R_5_20855001 chr3R_20855001 RAL-508 2108 chr3R 20870237 20870263 chr3R 20870342 20870368 12 104 2.0 4.0 3.0 3.0 131 chr3R 20870237 intergenic not near genes chr3R 20870302 intergenic not near genes chr3R 20870368 intergenic not near genes chr3R_12_20870001 chr3R_20870001 RAL-508 2109 chr3R 20870264 20870283 chr3R 20870337 20870388 6 97 0.5 3.0 1.8 2.1 124 chr3R 20870264 intergenic not near genes chr3R 20870326 intergenic not near genes chr3R 20870388 intergenic not near genes chr3R_6_20870001 chr3R_20870001 RAL-508 2110 chr3R 20901332 20901373 chr3R 20901438 20901479 6 101 2.5 6.5 4.5 1.1 147 chr3R 20901332 intergenic not near genes chr3R 20901406 intergenic not near genes chr3R 20901479 intergenic CG5621 + chr3R_6_20900001 chr3R_20900001 RAL-508 2111 chr3R 20929624 20929663 chr3R 20929979 20930004 22 354 2.5 3.5 3.0 5.5 380 chr3R 20929624 intron CG31191 - chr3R 20929814 intron CG31191 - chr3R 20930004 intron CG31191 - chr3R_22_20925001 chr3R_20925001 RAL-508 2112 chr3R 20942798 20942815 chr3R 20942892 20942896 9 92 4.0 1.5 2.8 2.4 98 chr3R 20942798 intron CG31191 - chr3R 20942847 intron CG31191 - chr3R 20942896 intron CG31191 - chr3R_9_20940001 chr3R_20940001 RAL-508 2113 chr3R 20952756 20952803 chr3R 20952855 20952881 12 92 3.5 5.5 4.5 2.2 125 chr3R 20952756 intron Atpalpha + chr3R 20952818 intron Atpalpha + chr3R 20952881 intron Atpalpha + chr3R_12_20950001 chr3R_20950001 RAL-508 2114 chr3R 20956939 20956962 chr3R 20957038 20957061 7 95 6.5 5.0 5.8 1.0 122 chr3R 20956939 intron Atpalpha + chr3R 20957000 intron Atpalpha + chr3R 20957061 intron Atpalpha + chr3R_7_20955001 chr3R_20955001 RAL-508 2115 chr3R 20981987 20982017 chr3R 20984474 20984504 11 2488 33.0 5.0 19.0 0.6 2517 chr3R 20981987 intron Calx + chr3R 20983246 intron Calx + chr3R 20984504 intron Calx + chr3R_11_20980001 chr3R_20980001 RAL-508 2116 chr3R 20990707 20990749 chr3R 20990809 20990851 11 100 4.5 2.0 3.2 2.6 144 chr3R 20990707 intron Calx + chr3R 20990779 intron Calx + chr3R 20990851 intron Calx + chr3R_11_20990001 chr3R_20990001 RAL-508 2117 chr3R 21015246 21015270 chr3R 21015353 21015376 6 105 5.5 6.5 6.0 0.9 130 chr3R 21015246 3` UTR Calx + chr3R 21015311 3` UTR Calx + chr3R 21015376 3` UTR Calx + chr3R_6_21015001 chr3R_21015001 RAL-508 2118 chr3R 21015274 21015300 chr3R 21015350 21015369 9 95 3.0 5.5 4.2 1.7 95 chr3R 21015274 3` UTR Calx + chr3R 21015322 3` UTR Calx + chr3R 21015369 3` UTR Calx + chr3R_9_21015001 chr3R_21015001 RAL-508 2119 chr3R 21108026 21108046 chr3R 21108307 21108327 8 280 4.5 4.5 4.5 1.5 301 chr3R 21108026 intergenic Sec15 -,rtet + chr3R 21108176 intergenic Sec15 -,rtet + chr3R 21108327 intergenic rtet +,Sec15 - chr3R_8_21105001 chr3R_21105001 RAL-508 2120 chr3R 21163250 21163271 chr3R 21163348 21163369 4 98 3.0 8.0 5.5 0.6 119 chr3R 21163250 intron SNF4Agamma + chr3R 21163310 intron SNF4Agamma + chr3R 21163369 intron SNF4Agamma + chr3R_4_21160001 chr3R_21160001 RAL-508 2121 chr3R 21189675 21189715 chr3R 21189772 21189812 7 97 1.5 2.5 2.0 2.3 137 chr3R 21189675 intron SNF4Agamma + chr3R 21189744 intron SNF4Agamma + chr3R 21189812 intron SNF4Agamma + chr3R_7_21185001 chr3R_21185001 RAL-508 2122 chr3R 21239787 21239958 chr3R 21239901 21240054 7 91 0.0 0.0 0.0 7.0 267 chr3R 21239787 intergenic not near genes chr3R 21239920 intergenic not near genes chr3R 21240054 intergenic not near genes chr3R_7_21235001 chr3R_21235001 RAL-508 2123 chr3R 21240433 21240463 chr3R 21240545 21240574 7 112 7.0 4.5 5.8 1.0 141 chr3R 21240433 intergenic not near genes chr3R 21240504 intergenic not near genes chr3R 21240574 intergenic not near genes chr3R_7_21240001 chr3R_21240001 RAL-508 2124 chr3R 21369967 21370018 chr3R 21370062 21370115 11 94 5.5 8.0 6.8 1.4 148 chr3R 21369967 intron mod(mdg4) - chr3R 21370041 intron mod(mdg4) - chr3R 21370115 intron mod(mdg4) - chr3R_11_21370001 chr3R_21370001 RAL-508 2125 chr3R 21383267 21383301 chr3R 21383367 21383376 5 89 0.0 1.0 0.5 3.3 109 chr3R 21383267 intergenic not near genes chr3R 21383322 intergenic not near genes chr3R 21383376 intergenic not near genes chr3R_5_21380001 chr3R_21380001 RAL-508 2126 chr3R 21385674 21385710 chr3R 21385776 21385812 8 102 4.5 0.0 2.2 2.5 138 chr3R 21385674 intergenic not near genes chr3R 21385743 intergenic not near genes chr3R 21385812 intergenic not near genes chr3R_8_21385001 chr3R_21385001 RAL-508 2127 chr3R 21385724 21385958 chr3R 21385774 21386055 11 86 2.5 0.0 1.2 5.0 331 chr3R 21385724 intergenic not near genes chr3R 21385890 intergenic not near genes chr3R 21386055 intergenic not near genes chr3R_11_21385001 chr3R_21385001 RAL-508 2128 chr3R 21464382 21464399 chr3R 21464488 21464505 4 105 3.5 1.0 2.2 1.2 123 chr3R 21464382 intergenic not near genes chr3R 21464444 intergenic not near genes chr3R 21464505 intergenic not near genes chr3R_4_21460001 chr3R_21460001 RAL-508 2129 chr3R 21471997 21472032 chr3R 21472096 21472131 10 99 6.5 4.5 5.5 1.5 134 chr3R 21471997 intergenic not near genes chr3R 21472064 intergenic not near genes chr3R 21472131 intergenic not near genes chr3R_10_21470001 chr3R_21470001 RAL-508 2130 chr3R 21519973 21520124 chr3R 21520094 21520238 16 117 0.0 0.0 0.0 16.0 265 chr3R 21519973 intergenic not near genes chr3R 21520106 intergenic not near genes chr3R 21520238 intergenic not near genes chr3R_16_21520001 chr3R_21520001 RAL-508 2131 chr3R 21594647 21594669 chr3R 21597319 21597357 8 2676 4.0 5.0 4.5 1.5 2710 chr3R 21594647 intron,5` UTR InR -,CR43653 + chr3R 21596002 intron InR - chr3R 21597357 intron InR - chr3R_8_21595001 chr3R_21595001 RAL-508 2132 chr3R 21761100 21761155 chr3R 21768512 21768533 mdg1 14 7397 6.0 2.5 4.2 2.7 7433 chr3R 21761100 exon CG42335 + chr3R 21764816 intron CG42335 + chr3R 21768533 exon CG42335 + chr3R_14_21760001 chr3R_21760001 RAL-508 2133 chr3R 17389054 17389054 chr3R 21907534 21907534 8 4518480 5.5 22.0 13.8 0.5 4518480 chr3R 17389054 intron,3` UTR Brf -,lute + chr3R 19648294 5` UTR CG6195 - chr3R 21907534 intergenic CG6678 + chr3R_8_19645001 chr3R_19645001 RAL-508 2134 chr3R 21907534 21907534 chr3R 28831801 28831802 28 6924268 22.0 18.0 20.0 1.3 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_28_25365001 chr3R_25365001 RAL-508 2135 chr3R 21907534 21907534 chr3R 29013340 29013340 4 7105806 22.0 21.5 21.8 0.2 7105806 chr3R 21907534 intergenic CG6678 + chr3R 25460437 intron Fur1 - chr3R 29013340 intron wat - chr3R_4_25460001 chr3R_25460001 RAL-508 2136 chr3R 17389054 17389054 chr3R 21907535 21907535 9 4518481 5.5 22.5 14.0 0.6 4518481 chr3R 17389054 intron,3` UTR Brf -,lute + chr3R 19648294 5` UTR CG6195 - chr3R 21907535 intergenic CG6678 + chr3R_9_19645001 chr3R_19645001 RAL-508 2137 chr3R 20177844 20177845 chr3R 21907535 21907535 7 1729690 11.0 22.5 16.8 0.4 1729691 chr3R 20177844 intergenic not near genes chr3R 21042690 intergenic Dhc93AB - chr3R 21907535 intergenic CG6678 + chr3R_7_21040001 chr3R_21040001 RAL-508 2138 chr3R 21337428 21337429 chr3R 21907535 21907535 4 570106 15.0 22.5 18.8 0.2 570107 chr3R 21337428 intron CG16791 - chr3R 21622482 intron E2f - chr3R 21907535 intergenic CG6678 + chr3R_4_21620001 chr3R_21620001 RAL-508 2139 chr3R 21907535 21907535 chr3R 26659333 26659337 5 4751800 22.5 7.5 15.0 0.3 4751802 chr3R 21907535 intergenic CG6678 + chr3R 24283436 intergenic CR45662 - chr3R 26659337 intron beat-VII - chr3R_5_24280001 chr3R_24280001 RAL-508 2140 chr3R 21907535 21907535 chr3R 28831801 28831805 51 6924267 22.5 18.0 20.2 2.4 6924270 chr3R 21907535 intergenic CG6678 + chr3R 25369670 intron Fur1 - chr3R 28831805 intron WASp - chr3R_51_25365001 chr3R_25365001 RAL-508 2141 chr3R 21907535 21907535 chr3R 29013339 29013380 11 7105808 22.5 21.5 22.0 0.5 7105845 chr3R 21907535 intergenic CG6678 + chr3R 25460458 intron Fur1 - chr3R 29013380 intron wat - chr3R_11_25460001 chr3R_25460001 RAL-508 2142 chr3R 17389054 17389055 chr3R 21907536 21907536 12 4518482 5.5 22.5 14.0 0.8 4518482 chr3R 17389054 intron,3` UTR Brf -,lute + chr3R 19648295 5` UTR CG6195 - chr3R 21907536 intergenic CG6678 + chr3R_12_19645001 chr3R_19645001 RAL-508 2143 chr3R 19457915 19457921 chr3R 21907536 21907536 5 2449620 14.0 22.5 18.2 0.3 2449621 chr3R 19457915 3` UTR CG31221 + chr3R 20682726 intergenic not near genes chr3R 21907536 intergenic CG6678 + chr3R_5_20680001 chr3R_20680001 RAL-508 2144 chr3R 21907536 21907536 chr3R 26659332 26659337 5 4751798 22.0 8.0 15.0 0.3 4751801 chr3R 21907536 intergenic CG6678 + chr3R 24283436 intergenic CR45662 - chr3R 26659337 intron beat-VII - chr3R_5_24280001 chr3R_24280001 RAL-508 2145 chr3R 21907536 21907536 chr3R 28831801 28831803 51 6924266 22.0 18.0 20.0 2.4 6924267 chr3R 21907536 intergenic CG6678 + chr3R 25369670 intron Fur1 - chr3R 28831803 intron WASp - chr3R_51_25365001 chr3R_25365001 RAL-508 2146 chr3R 21907536 21907536 chr3R 29013339 29013340 9 7105804 22.0 21.5 21.8 0.4 7105804 chr3R 21907536 intergenic CG6678 + chr3R 25460438 intron Fur1 - chr3R 29013340 intron wat - chr3R_9_25460001 chr3R_25460001 RAL-508 2147 chr3R 21923999 21924049 chr3R 21924099 21924158 8 107 6.0 2.0 4.0 1.6 159 chr3R 21923999 intergenic not near genes chr3R 21924078 intergenic not near genes chr3R 21924158 intergenic not near genes chr3R_8_21920001 chr3R_21920001 RAL-508 2148 chr3R 21936321 21936352 chr3R 21936430 21936459 10 108 7.5 4.5 6.0 1.4 138 chr3R 21936321 intergenic not near genes chr3R 21936390 intergenic not near genes chr3R 21936459 intergenic not near genes chr3R_10_21935001 chr3R_21935001 RAL-508 2149 chr3R 21936355 21936372 chr3R 21936426 21936431 9 81 2.5 2.5 2.5 2.6 76 chr3R 21936355 intergenic not near genes chr3R 21936393 intergenic not near genes chr3R 21936431 intergenic not near genes chr3R_9_21935001 chr3R_21935001 RAL-508 2150 chr3R 21985211 21985254 chr3R 21985336 21985379 10 123 3.0 4.0 3.5 2.2 168 chr3R 21985211 intron Eip93F + chr3R 21985295 intron Eip93F + chr3R 21985379 intron Eip93F + chr3R_10_21985001 chr3R_21985001 RAL-508 2151 chr3R 22080958 22081002 chr3R 22081057 22081088 6 94 5.5 4.5 5.0 1.0 130 chr3R 22080958 intron CG13408 + chr3R 22081023 intron CG13408 + chr3R 22081088 intron CG13408 + chr3R_6_22080001 chr3R_22080001 RAL-508 2152 chr3R 22084608 22084621 chr3R 22084717 22084730 4 109 1.0 4.5 2.8 1.1 122 chr3R 22084608 intergenic not near genes chr3R 22084669 intergenic not near genes chr3R 22084730 intergenic not near genes chr3R_4_22080001 chr3R_22080001 RAL-508 2153 chr3R 22163016 22163055 chr3R 22163138 22163173 11 121 6.0 7.5 6.8 1.4 157 chr3R 22163016 intron SKIP + chr3R 22163094 intron SKIP + chr3R 22163173 intron SKIP + chr3R_11_22160001 chr3R_22160001 RAL-508 2154 chr3R 22234662 22234714 chr3R 22236001 22236030 pogo 13 1334 5.5 2.0 3.8 2.7 1368 chr3R 22234662 intron SKIP + chr3R 22235346 intron SKIP + chr3R 22236030 intron SKIP + chr3R_13_22235001 chr3R_22235001 RAL-508 2155 chr3R 22239471 22239523 chr3R 22248551 22248591 roo 11 9075 3.5 0.0 1.8 3.9 9120 chr3R 22239471 intron SKIP + chr3R 22244031 intron SKIP + chr3R 22248591 intron SKIP + chr3R_11_22240001 chr3R_22240001 RAL-508 2156 chr3R 22251793 22251821 chr3R 22251932 22251960 6 138 3.5 2.5 3.0 1.5 167 chr3R 22251793 intron SKIP + chr3R 22251876 intron SKIP + chr3R 22251960 intron SKIP + chr3R_6_22250001 chr3R_22250001 RAL-508 2157 chr3R 22251822 22251841 chr3R 22251930 22251947 8 123 2.0 1.5 1.8 2.9 125 chr3R 22251822 intron SKIP + chr3R 22251884 intron SKIP + chr3R 22251947 intron SKIP + chr3R_8_22250001 chr3R_22250001 RAL-508 2158 chr3R 22424996 22425016 chr3R 22425242 22425259 6 244 22.5 21.0 21.8 0.3 263 chr3R 22424996 intergenic pinta -,CG13847 - chr3R 22425128 intergenic CG13847 -,pinta - chr3R 22425259 3` UTR CG13847 - chr3R_6_22425001 chr3R_22425001 RAL-508 2159 chr3R 22428570 22428609 chr3R 22428653 22428704 9 90 8.0 4.0 6.0 1.3 134 chr3R 22428570 intron CG13847 - chr3R 22428637 intron CG13847 - chr3R 22428704 intron CG13847 - chr3R_9_22425001 chr3R_22425001 RAL-508 2160 chr3R 22429964 22429979 chr3R 22430064 22430078 7 100 9.0 2.0 5.5 1.1 114 chr3R 22429964 intron CG13847 - chr3R 22430021 intron CG13847 - chr3R 22430078 intron CG13847 - chr3R_7_22430001 chr3R_22430001 RAL-508 2161 chr3R 22433076 22433100 chr3R 22433196 22433200 5 114 10.5 12.0 11.2 0.4 124 chr3R 22433076 intron CG13847 - chr3R 22433138 intron CG13847 - chr3R 22433200 intron CG13847 - chr3R_5_22430001 chr3R_22430001 RAL-508 2162 chr3R 22450549 22450577 chr3R 22453190 22453235 NOF 9 2652 2.5 6.0 4.2 1.7 2686 chr3R 22450549 intron CG34376 + chr3R 22451892 intron CG34376 + chr3R 22453235 intron CG34376 + chr3R_9_22450001 chr3R_22450001 RAL-508 2163 chr3R 22493830 22493850 chr3R 22493925 22493946 7 94 16.5 4.0 10.2 0.6 116 chr3R 22493830 intergenic CG7046 + chr3R 22493888 intergenic CG7046 + chr3R 22493946 intergenic CG7046 + chr3R_7_22490001 chr3R_22490001 RAL-508 2164 chr3R 22493857 22493882 chr3R 22493924 22493967 8 84 9.5 4.0 6.8 1.0 110 chr3R 22493857 intergenic CG7046 + chr3R 22493912 intergenic CG7046 + chr3R 22493967 intergenic CG7046 + chr3R_8_22490001 chr3R_22490001 RAL-508 2165 chr3R 22510420 22510457 chr3R 22510525 22510542 9 102 6.0 1.0 3.5 2.0 122 chr3R 22510420 intron Octbeta1R + chr3R 22510481 intron Octbeta1R + chr3R 22510542 intron Octbeta1R + chr3R_9_22510001 chr3R_22510001 RAL-508 2166 chr3R 22531694 22531722 chr3R 22531801 22531831 6 109 0.0 0.0 0.0 6.0 137 chr3R 22531694 intron CG33093 - chr3R 22531762 exon CG33093 - chr3R 22531831 exon CG33093 - chr3R_6_22530001 chr3R_22530001 RAL-508 2167 chr3R 22623508 22623559 chr3R 22623621 22623658 18 106 4.5 2.5 3.5 4.0 150 chr3R 22623508 intron loco - chr3R 22623583 intron loco - chr3R 22623658 intron loco - chr3R_18_22620001 chr3R_22620001 RAL-508 2168 chr3R 22632087 22632125 chr3R 22632190 22632228 10 100 0.5 0.0 0.2 8.3 141 chr3R 22632087 intron loco - chr3R 22632158 intron loco - chr3R 22632228 intron loco - chr3R_10_22630001 chr3R_22630001 RAL-508 2169 chr3R 22672280 22672320 chr3R 22672393 22672433 8 113 4.0 3.5 3.8 1.7 153 chr3R 22672280 intron wake + chr3R 22672356 intron wake + chr3R 22672433 intron wake + chr3R_8_22670001 chr3R_22670001 RAL-508 2170 chr3R 22769074 22769125 chr3R 22769171 22769222 14 94 5.5 5.5 5.5 2.2 148 chr3R 22769074 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769148 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769222 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_14_22765001 chr3R_22765001 RAL-508 2171 chr3R 22803423 22803455 chr3R 22803633 22803664 11 209 6.0 2.5 4.2 2.1 241 chr3R 22803423 intergenic not near genes chr3R 22803544 intergenic not near genes chr3R 22803664 intergenic not near genes chr3R_11_22800001 chr3R_22800001 RAL-508 2172 chr3R 22867418 22867460 chr3R 22867569 22867595 4 147 6.0 2.0 4.0 0.8 177 chr3R 22867418 intergenic not near genes chr3R 22867506 intergenic not near genes chr3R 22867595 intergenic not near genes chr3R_4_22865001 chr3R_22865001 RAL-508 2173 chr3R 22880585 22880611 chr3R 22880682 22880683 4 91 6.5 9.5 8.0 0.4 98 chr3R 22880585 intergenic not near genes chr3R 22880634 intergenic not near genes chr3R 22880683 intergenic not near genes chr3R_4_22880001 chr3R_22880001 RAL-508 2174 chr3R 22880928 22880960 chr3R 22881086 22881117 7 157 2.0 2.5 2.2 2.2 189 chr3R 22880928 intergenic not near genes chr3R 22881022 intergenic not near genes chr3R 22881117 intergenic not near genes chr3R_7_22880001 chr3R_22880001 RAL-508 2175 chr3R 22881183 22881230 chr3R 22884909 22884955 Doc 6 3719 1.0 5.0 3.0 1.5 3772 chr3R 22881183 intergenic not near genes chr3R 22883069 intergenic not near genes chr3R 22884955 intergenic not near genes chr3R_6_22880001 chr3R_22880001 RAL-508 2176 chr3R 22919144 22919186 chr3R 22919253 22919263 8 99 3.0 3.0 3.0 2.0 119 chr3R 22919144 intron klg + chr3R 22919204 intron klg + chr3R 22919263 intron klg + chr3R_8_22915001 chr3R_22915001 RAL-508 2177 chr3R 23064159 23064203 chr3R 23064282 23064332 15 124 4.0 0.5 2.2 4.7 173 chr3R 23064159 exon CG17111 - chr3R 23064246 intron CG17111 - chr3R 23064332 exon CG17111 - chr3R_15_23060001 chr3R_23060001 RAL-508 2178 chr3R 23073639 23073681 chr3R 23073743 23073789 9 99 7.0 1.0 4.0 1.8 150 chr3R 23073639 intron CG13830 - chr3R 23073714 intron CG13830 - chr3R 23073789 intron CG13830 - chr3R_9_23070001 chr3R_23070001 RAL-508 2179 chr3R 23079038 23079079 chr3R 23079178 23079219 10 140 3.5 4.5 4.0 2.0 181 chr3R 23079038 intron CG13830 - chr3R 23079128 intron CG13830 - chr3R 23079219 intron CG13830 - chr3R_10_23075001 chr3R_23075001 RAL-508 2180 chr3R 23090383 23090435 chr3R 23090486 23090531 9 102 2.0 4.5 3.2 2.1 148 chr3R 23090383 intron CG13830 - chr3R 23090457 intron CG13830 - chr3R 23090531 intron CG13830 - chr3R_9_23090001 chr3R_23090001 RAL-508 2181 chr3R 23091244 23091288 chr3R 23091348 23091393 13 105 5.0 3.0 4.0 2.6 149 chr3R 23091244 intron CG13830 - chr3R 23091318 intron CG13830 - chr3R 23091393 intron CG13830 - chr3R_13_23090001 chr3R_23090001 RAL-508 2182 chr3R 23245702 23245756 chr3R 23245809 23245863 9 106 5.0 1.0 3.0 2.2 161 chr3R 23245702 5` UTR CG4467 - chr3R 23245782 intron CG4467 - chr3R 23245863 intron CG4467 - chr3R_9_23245001 chr3R_23245001 RAL-508 2183 chr3R 23246529 23246538 chr3R 23246636 23246645 4 107 6.0 0.0 3.0 1.0 116 chr3R 23246529 intron CG4467 - chr3R 23246587 intron CG4467 - chr3R 23246645 intron CG4467 - chr3R_4_23245001 chr3R_23245001 RAL-508 2184 chr3R 23269709 23269755 chr3R 23269809 23269827 16 94 7.5 6.0 6.8 2.1 118 chr3R 23269709 intron orb - chr3R 23269768 intron orb - chr3R 23269827 intron orb - chr3R_16_23265001 chr3R_23265001 RAL-508 2185 chr3R 23346555 23346571 chr3R 23346654 23346669 4 99 5.5 4.0 4.8 0.7 114 chr3R 23346555 intergenic pnt - chr3R 23346612 intergenic pnt - chr3R 23346669 intergenic not near genes chr3R_4_23345001 chr3R_23345001 RAL-508 2186 chr3R 23390945 23390955 chr3R 23391047 23391056 4 102 5.0 0.0 2.5 1.1 111 chr3R 23390945 intergenic CR43387 + chr3R 23391000 intergenic CR43387 + chr3R 23391056 intergenic CR43387 + chr3R_4_23390001 chr3R_23390001 RAL-508 2187 chr3R 23453668 23453706 chr3R 23453766 23453805 8 94 3.0 1.5 2.2 2.5 137 chr3R 23453668 intron CG4374 - chr3R 23453736 intron CG4374 - chr3R 23453805 intron CG4374 - chr3R_8_23450001 chr3R_23450001 RAL-508 2188 chr3R 23558382 23558426 chr3R 23560183 23560226 Bari1 10 1800 4.5 3.5 4.0 2.0 1844 chr3R 23558382 intron beat-IV + chr3R 23559304 intron beat-IV + chr3R 23560226 intron beat-IV + chr3R_10_23555001 chr3R_23555001 RAL-508 2189 chr3R 23684685 23684724 chr3R 23685182 23685212 roo 9 490 4.0 4.0 4.0 1.8 527 chr3R 23684685 exon CG18754 + chr3R 23684948 intron CG18754 + chr3R 23685212 exon CG18754 + chr3R_9_23680001 chr3R_23680001 RAL-508 2190 chr3R 23733802 23733809 chr3R 23734035 23734042 5 232 9.0 4.5 6.8 0.6 240 chr3R 23733802 5` UTR Hmgcr + chr3R 23733922 intron Hmgcr + chr3R 23734042 intron Hmgcr + chr3R_5_23730001 chr3R_23730001 RAL-508 2191 chr3R 23733827 23733842 chr3R 23734034 23734071 4 225 3.5 4.5 4.0 0.8 244 chr3R 23733827 5` UTR Hmgcr + chr3R 23733949 intron Hmgcr + chr3R 23734071 intron Hmgcr + chr3R_4_23730001 chr3R_23730001 RAL-508 2192 chr3R 23835388 23835403 chr3R 23844558 23844573 roo 6 9170 6.5 0.0 3.2 1.4 9185 chr3R 23835388 intron CG34355 + chr3R 23839980 intron CG34355 + chr3R 23844573 intron CG34355 + chr3R_6_23835001 chr3R_23835001 RAL-508 2193 chr3R 23872477 23872524 chr3R 23872643 23872681 11 164 3.0 4.5 3.8 2.3 204 chr3R 23872477 intron Pli - chr3R 23872579 intron Pli - chr3R 23872681 intron Pli - chr3R_11_23870001 chr3R_23870001 RAL-508 2194 chr3R 23875931 23875979 chr3R 23876191 23876208 15 253 1.5 3.5 2.5 4.3 277 chr3R 23875931 intron Pli - chr3R 23876070 intron Pli - chr3R 23876208 intron Pli - chr3R_15_23875001 chr3R_23875001 RAL-508 2195 chr3R 23883600 23883643 chr3R 23883701 23883719 8 94 3.5 2.5 3.0 2.0 119 chr3R 23883600 intron Pli - chr3R 23883660 intron Pli - chr3R 23883719 intron Pli - chr3R_8_23880001 chr3R_23880001 RAL-508 2196 chr3R 23944890 23944933 chr3R 23944995 23945038 16 104 2.5 2.5 2.5 4.6 148 chr3R 23944890 intron CG12268 - chr3R 23944964 intron CG12268 - chr3R 23945038 exon CG12268 - chr3R_16_23940001 chr3R_23940001 RAL-508 2197 chr3R 23949023 23949070 chr3R 23949118 23949167 14 97 3.0 1.0 2.0 4.7 144 chr3R 23949023 intergenic not near genes chr3R 23949095 intergenic not near genes chr3R 23949167 intergenic not near genes chr3R_14_23945001 chr3R_23945001 RAL-508 2198 chr3R 24072079 24072122 chr3R 24072536 24072578 jockey 5 450 4.5 0.0 2.2 1.6 499 chr3R 24072079 intron 4EHP - chr3R 24072328 intron 4EHP - chr3R 24072578 intron 4EHP - chr3R_5_24070001 chr3R_24070001 RAL-508 2199 chr3R 24076905 24076948 chr3R 24078392 24078417 hobo 8 1482 4.0 2.5 3.2 1.9 1512 chr3R 24076905 intron 4EHP - chr3R 24077661 intron 4EHP - chr3R 24078417 intron 4EHP - chr3R_8_24075001 chr3R_24075001 RAL-508 2200 chr3R 24100438 24100481 chr3R 24100552 24100596 9 113 2.0 1.5 1.8 3.2 158 chr3R 24100438 intron 4EHP - chr3R 24100517 intron 4EHP - chr3R 24100596 intron 4EHP - chr3R_9_24100001 chr3R_24100001 RAL-508 2201 chr3R 24199721 24199762 chr3R 24199821 24199861 7 100 2.5 4.0 3.2 1.7 140 chr3R 24199721 intron twin - chr3R 24199791 intron twin - chr3R 24199861 intron twin - chr3R_7_24195001 chr3R_24195001 RAL-508 2202 chr3R 24207218 24207234 chr3R 24212314 24212330 flea 6 5096 4.0 10.0 7.0 0.8 5112 chr3R 24207218 intron twin - chr3R 24209774 intron twin - chr3R 24212330 intron twin - chr3R_6_24205001 chr3R_24205001 RAL-508 2203 chr3R 24431582 24431625 chr3R 24431681 24431724 15 96 2.5 1.0 1.8 5.4 142 chr3R 24431582 intron nAChRalpha1 - chr3R 24431653 intron nAChRalpha1 - chr3R 24431724 intron nAChRalpha1 - chr3R_15_24430001 chr3R_24430001 RAL-508 2204 chr3R 24434233 24434249 chr3R 24434331 24434347 4 97 6.5 4.0 5.2 0.6 114 chr3R 24434233 intron nAChRalpha1 - chr3R 24434290 intron nAChRalpha1 - chr3R 24434347 intron nAChRalpha1 - chr3R_4_24430001 chr3R_24430001 RAL-508 2205 chr3R 24434251 24434266 chr3R 24434328 24434362 8 94 2.5 3.0 2.8 2.1 111 chr3R 24434251 intron nAChRalpha1 - chr3R 24434306 intron nAChRalpha1 - chr3R 24434362 intron nAChRalpha1 - chr3R_8_24430001 chr3R_24430001 RAL-508 2206 chr3R 24493258 24493307 chr3R 24493507 24493556 BS 17 247 5.5 6.0 5.8 2.5 298 chr3R 24493258 intergenic not near genes chr3R 24493407 intergenic not near genes chr3R 24493556 intergenic not near genes chr3R_17_24490001 chr3R_24490001 RAL-508 2207 chr3R 24527805 24527830 chr3R 24527916 24527941 6 111 1.0 3.5 2.2 1.9 136 chr3R 24527805 intergenic CG6607 +,CG13618 + chr3R 24527873 intergenic CG6607 +,CG13618 + chr3R 24527941 intergenic CG6607 +,CG13618 + chr3R_6_24525001 chr3R_24525001 RAL-508 2208 chr3R 24730076 24730111 chr3R 24732474 24732481 Doc 7 2391 5.0 1.0 3.0 1.8 2405 chr3R 24730076 intron tok + chr3R 24731278 intron tok + chr3R 24732481 intron tok + chr3R_7_24730001 chr3R_24730001 RAL-508 2209 chr3R 24743009 24743061 chr3R 24743114 24743166 10 100 2.0 2.5 2.2 3.1 157 chr3R 24743009 intron tok + chr3R 24743088 intron tok + chr3R 24743166 exon tok + chr3R_10_24740001 chr3R_24740001 RAL-508 2210 chr3R 24810379 24810406 chr3R 24810495 24810522 7 116 4.5 8.0 6.2 1.0 143 chr3R 24810379 intron CG5807 - chr3R 24810450 intron CG5807 - chr3R 24810522 intron CG5807 - chr3R_7_24810001 chr3R_24810001 RAL-508 2211 chr3R 24925309 24925352 chr3R 24925410 24925454 16 99 2.0 6.0 4.0 3.2 145 chr3R 24925309 5` UTR Trf4-2 + chr3R 24925382 5` UTR Trf4-2 + chr3R 24925454 5` UTR Trf4-2 + chr3R_16_24925001 chr3R_24925001 RAL-508 2212 chr3R 24927084 24927156 chr3R 24931918 24931928 Doc 8 4811 0.0 0.5 0.2 6.7 4844 chr3R 24927084 3` UTR Trf4-2 + chr3R 24929506 intergenic not near genes chr3R 24931928 intergenic CG11771 + chr3R_8_24925001 chr3R_24925001 RAL-508 2213 chr3R 25182149 25182185 chr3R 25182579 25182617 4 420 2.5 3.5 3.0 1.0 468 chr3R 25182149 intron lobo - chr3R 25182383 intron lobo - chr3R 25182617 intron lobo - chr3R_4_25180001 chr3R_25180001 RAL-508 2214 chr3R 25235698 25235716 chr3R 25235785 25235826 6 106 1.5 0.0 0.8 3.3 128 chr3R 25235698 intergenic CG10420 - chr3R 25235762 intergenic CG10420 - chr3R 25235826 intergenic CG10420 - chr3R_6_25235001 chr3R_25235001 RAL-508 2215 chr3R 25236164 25236209 chr3R 25236322 25236322 13 150 6.0 2.0 4.0 2.6 158 chr3R 25236164 intergenic not near genes chr3R 25236243 intergenic not near genes chr3R 25236322 intergenic not near genes chr3R_13_25235001 chr3R_25235001 RAL-508 2216 chr3R 25239205 25239253 chr3R 25239335 25239384 15 129 5.0 5.5 5.2 2.4 179 chr3R 25239205 intergenic CG11852 + chr3R 25239294 intergenic CG11852 + chr3R 25239384 intergenic CG11852 + chr3R_15_25235001 chr3R_25235001 RAL-508 2217 chr3R 25267707 25267748 chr3R 25267843 25267884 11 136 2.0 3.0 2.5 3.1 177 chr3R 25267707 3` UTR,intron RIOK2 +,CR45214 - chr3R 25267796 intron CR45214 - chr3R 25267884 intron CR45214 - chr3R_11_25265001 chr3R_25265001 RAL-508 2218 chr3R 25296148 25296193 chr3R 25296249 25296288 11 100 2.5 10.0 6.2 1.5 140 chr3R 25296148 3` UTR CG31097 - chr3R 25296218 3` UTR CG31097 - chr3R 25296288 3` UTR CG31097 - chr3R_11_25295001 chr3R_25295001 RAL-508 2219 chr3R 25527119 25527150 chr3R 25527233 25527264 5 114 4.5 13.5 9.0 0.5 145 chr3R 25527119 intron msi + chr3R 25527192 intron msi + chr3R 25527264 intron msi + chr3R_5_25525001 chr3R_25525001 RAL-508 2220 chr3R 25561401 25561430 chr3R 25561498 25561545 11 113 2.0 2.0 2.0 3.7 144 chr3R 25561401 intron msi + chr3R 25561473 intron msi + chr3R 25561545 intron msi + chr3R_11_25560001 chr3R_25560001 RAL-508 2221 chr3R 25576820 25576867 chr3R 25576939 25576986 16 116 3.5 3.5 3.5 3.6 166 chr3R 25576820 intron msi + chr3R 25576903 intron msi + chr3R 25576986 intron msi + chr3R_16_25575001 chr3R_25575001 RAL-508 2222 chr3R 25597191 25597240 chr3R 25597288 25597337 20 94 4.5 4.5 4.5 3.6 146 chr3R 25597191 intron,intron msi +,ymp - chr3R 25597264 intron,intron msi +,ymp - chr3R 25597337 intron,intron msi +,ymp - chr3R_20_25595001 chr3R_25595001 RAL-508 2223 chr3R 25612814 25612862 chr3R 25612938 25612989 16 123 1.5 3.0 2.2 5.0 175 chr3R 25612814 intron Npl4 - chr3R 25612902 intron Npl4 - chr3R 25612989 intron Npl4 - chr3R_16_25610001 chr3R_25610001 RAL-508 2224 chr3R 25652305 25652347 chr3R 25652395 25652444 12 94 0.5 2.5 1.5 4.8 139 chr3R 25652305 intergenic not near genes chr3R 25652374 intergenic not near genes chr3R 25652444 intergenic not near genes chr3R_12_25650001 chr3R_25650001 RAL-508 2225 chr3R 25669047 25669085 chr3R 25669160 25669198 8 112 3.0 1.0 2.0 2.7 151 chr3R 25669047 intron Lgr3 + chr3R 25669122 intron Lgr3 + chr3R 25669198 exon Lgr3 + chr3R_8_25665001 chr3R_25665001 RAL-508 2226 chr3R 25671219 25671272 chr3R 25671337 25671390 16 117 3.0 2.0 2.5 4.6 171 chr3R 25671219 intron Lgr3 + chr3R 25671304 intron Lgr3 + chr3R 25671390 intron Lgr3 + chr3R_16_25670001 chr3R_25670001 RAL-508 2227 chr3R 25687389 25687413 chr3R 25687511 25687530 4 121 2.0 0.5 1.2 1.8 141 chr3R 25687389 intergenic CLS - chr3R 25687460 intergenic CLS - chr3R 25687530 intergenic CLS - chr3R_4_25685001 chr3R_25685001 RAL-508 2228 chr3R 25720787 25720833 chr3R 25720899 25720938 8 106 0.0 4.5 2.2 2.5 151 chr3R 25720787 intron LpR2 - chr3R 25720862 intron LpR2 - chr3R 25720938 intron LpR2 - chr3R_8_25720001 chr3R_25720001 RAL-508 2229 chr3R 25725819 25725852 chr3R 25734999 25735032 roo 6 9178 2.0 5.5 3.8 1.2 9213 chr3R 25725819 intron LpR2 - chr3R 25730426 intron LpR2 - chr3R 25735032 intron LpR2 - chr3R_6_25730001 chr3R_25730001 RAL-508 2230 chr3R 25755183 25755227 chr3R 25756062 25756106 19 876 3.0 4.0 3.5 4.2 923 chr3R 25755183 intron LpR1 - chr3R 25755644 intron LpR1 - chr3R 25756106 intron LpR1 - chr3R_19_25755001 chr3R_25755001 RAL-508 2231 chr3R 25765857 25765911 chr3R 25765955 25765987 19 88 5.0 1.5 3.2 4.5 130 chr3R 25765857 intergenic not near genes chr3R 25765922 intergenic not near genes chr3R 25765987 intergenic not near genes chr3R_19_25765001 chr3R_25765001 RAL-508 2232 chr3R 25832678 25832721 chr3R 25841877 25841923 roo 10 9196 3.0 5.0 4.0 2.0 9245 chr3R 25832678 exon alpha4GT2 + chr3R 25837300 intron alpha4GT2 + chr3R 25841923 exon alpha4GT2 + chr3R_10_25835001 chr3R_25835001 RAL-508 2233 chr3R 25857135 25857165 chr3R 25857232 25857260 9 96 3.0 7.0 5.0 1.5 125 chr3R 25857135 intron CG5890 + chr3R 25857198 intron CG5890 + chr3R 25857260 intron CG5890 + chr3R_9_25855001 chr3R_25855001 RAL-508 2234 chr3R 25861815 25861848 chr3R 25861907 25861945 7 96 2.0 3.5 2.8 1.8 130 chr3R 25861815 intron CG5890 + chr3R 25861880 intron CG5890 + chr3R 25861945 intron CG5890 + chr3R_7_25860001 chr3R_25860001 RAL-508 2235 chr3R 25900879 25900920 chr3R 25903577 25903630 18 2700 38.0 46.5 42.2 0.4 2751 chr3R 25900879 exon CG31091 + chr3R 25902254 intergenic CG31091 +,CG31089 + chr3R 25903630 exon,intron CG31089 +,CR43259 - chr3R_18_25900001 chr3R_25900001 RAL-508 2236 chr3R 25932727 25932756 chr3R 25933137 25933168 10 411 6.0 2.5 4.2 1.9 441 chr3R 25932727 intron CCAP-R - chr3R 25932948 intron CCAP-R - chr3R 25933168 intron CCAP-R - chr3R_10_25930001 chr3R_25930001 RAL-508 2237 chr3R 25974675 25974700 chr3R 25974784 25974817 5 115 5.0 4.5 4.8 0.9 142 chr3R 25974675 intron CG42261 + chr3R 25974746 intron CG42261 + chr3R 25974817 intron CG42261 + chr3R_5_25970001 chr3R_25970001 RAL-508 2238 chr3R 25974702 25974711 chr3R 25974783 25974828 6 99 4.5 4.0 4.2 1.2 126 chr3R 25974702 intron CG42261 + chr3R 25974765 intron CG42261 + chr3R 25974828 intron CG42261 + chr3R_6_25970001 chr3R_25970001 RAL-508 2239 chr3R 25997232 25997266 chr3R 25997339 25997373 6 107 3.0 3.0 3.0 1.5 141 chr3R 25997232 intergenic CG43116 -,E(spl)mdelta-HLH + chr3R 25997302 intergenic CG43116 -,E(spl)mdelta-HLH + chr3R 25997373 intergenic E(spl)mdelta-HLH +,CG43116 - chr3R_6_25995001 chr3R_25995001 RAL-508 2240 chr3R 26122443 26122480 chr3R 26122538 26122576 19 91 8.0 5.5 6.8 2.4 133 chr3R 26122443 intron CG31324 + chr3R 26122510 intron CG31324 + chr3R 26122576 intron CG31324 + chr3R_19_26120001 chr3R_26120001 RAL-508 2241 chr3R 26126448 26126502 chr3R 26126622 26126676 15 173 2.5 5.0 3.8 3.1 228 chr3R 26126448 intron CG31324 + chr3R 26126562 intron CG31324 + chr3R 26126676 intron,5` UTR CG31324 +,CG14556 + chr3R_15_26125001 chr3R_26125001 RAL-508 2242 chr3R 26239808 26239849 chr3R 26240138 26240178 6 330 5.5 2.5 4.0 1.2 370 chr3R 26239808 intron CR42745 + chr3R 26239993 intron CR42745 + chr3R 26240178 intron CR42745 + chr3R_6_26235001 chr3R_26235001 RAL-508 2243 chr3R 26263964 26264016 chr3R 26264068 26264100 10 90 2.0 2.5 2.2 3.1 136 chr3R 26263964 intron CG6154 + chr3R 26264032 intron CG6154 + chr3R 26264100 intron CG6154 + chr3R_10_26260001 chr3R_26260001 RAL-508 2244 chr3R 26294697 26294750 chr3R 26294795 26294843 18 97 6.0 4.0 5.0 3.0 146 chr3R 26294697 intergenic not near genes chr3R 26294770 intergenic not near genes chr3R 26294843 intergenic not near genes chr3R_18_26290001 chr3R_26290001 RAL-508 2245 chr3R 26376313 26376352 chr3R 26385488 26385510 roo 8 9174 7.5 0.5 4.0 1.6 9197 chr3R 26376313 intergenic not near genes chr3R 26380912 intergenic not near genes chr3R 26385510 intergenic not near genes chr3R_8_26380001 chr3R_26380001 RAL-508 2246 chr3R 26394536 26394561 chr3R 26394704 26394725 5 166 4.0 5.5 4.8 0.9 189 chr3R 26394536 intergenic not near genes chr3R 26394630 intergenic not near genes chr3R 26394725 intergenic not near genes chr3R_5_26390001 chr3R_26390001 RAL-508 2247 chr3R 26405900 26405926 chr3R 26405996 26406022 6 96 1.0 1.0 1.0 3.0 122 chr3R 26405900 intergenic not near genes chr3R 26405961 intergenic not near genes chr3R 26406022 intergenic not near genes chr3R_6_26405001 chr3R_26405001 RAL-508 2248 chr3R 26409902 26409941 chr3R 26410008 26410038 6 104 2.0 2.5 2.2 1.9 136 chr3R 26409902 intergenic not near genes chr3R 26409970 intergenic not near genes chr3R 26410038 intergenic not near genes chr3R_6_26405001 chr3R_26405001 RAL-508 2249 chr3R 26456628 26456671 chr3R 26456718 26456765 10 90 2.0 4.5 3.2 2.4 137 chr3R 26456628 intergenic CG14237 +,Pdf - chr3R 26456696 intergenic CG14237 + chr3R 26456765 intergenic CG14237 + chr3R_10_26455001 chr3R_26455001 RAL-508 2250 chr3R 26461813 26461834 chr3R 26461938 26461967 8 131 3.5 7.0 5.2 1.3 154 chr3R 26461813 intron CG5455 + chr3R 26461890 intron CG5455 + chr3R 26461967 intron CG5455 + chr3R_8_26460001 chr3R_26460001 RAL-508 2251 chr3R 26510485 26510527 chr3R 26519566 26519608 roo 12 9080 7.0 3.0 5.0 2.0 9123 chr3R 26510485 intron plum - chr3R 26515046 intron plum - chr3R 26519608 intron,5` UTR plum -,CR45226 + chr3R_12_26515001 chr3R_26515001 RAL-508 2252 chr3R 26558323 26558358 chr3R 26565639 26565664 Stalker4 12 7321 4.0 1.5 2.8 3.2 7341 chr3R 26558323 intron scrib + chr3R 26561994 intron scrib + chr3R 26565664 intron scrib + chr3R_12_26560001 chr3R_26560001 RAL-508 2253 chr3R 26641618 26641662 chr3R 26641725 26641736 17 99 8.5 3.0 5.8 2.5 118 chr3R 26641618 intergenic not near genes chr3R 26641677 intergenic not near genes chr3R 26641736 intergenic not near genes chr3R_17_26640001 chr3R_26640001 RAL-508 2254 chr3R 26642712 26642760 chr3R 26643124 26643174 jockey 8 412 7.5 5.5 6.5 1.1 462 chr3R 26642712 intergenic not near genes chr3R 26642943 intergenic not near genes chr3R 26643174 intergenic not near genes chr3R_8_26640001 chr3R_26640001 RAL-508 2255 chr3R 26659922 26659965 chr3R 26660043 26660086 13 120 1.5 2.5 2.0 4.3 164 chr3R 26659922 intron beat-VII - chr3R 26660004 intron beat-VII - chr3R 26660086 intron beat-VII - chr3R_13_26660001 chr3R_26660001 RAL-508 2256 chr3R 26669657 26669682 chr3R 26669759 26669783 8 102 3.0 2.5 2.8 2.1 126 chr3R 26669657 intron beat-VII - chr3R 26669720 intron beat-VII - chr3R 26669783 intron beat-VII - chr3R_8_26665001 chr3R_26665001 RAL-508 2257 chr3R 26710810 26710857 chr3R 26710912 26710961 21 103 3.5 6.0 4.8 3.6 151 chr3R 26710810 intron amon - chr3R 26710886 intron amon - chr3R 26710961 intron amon - chr3R_21_26710001 chr3R_26710001 RAL-508 2258 chr3R 26810539 26810579 chr3R 26811044 26811083 roo 11 503 2.5 2.5 2.5 3.1 544 chr3R 26810539 intron Tl + chr3R 26810811 intron Tl + chr3R 26811083 intron Tl + chr3R_11_26810001 chr3R_26810001 RAL-508 2259 chr3R 26845575 26845596 chr3R 26845651 26845696 5 93 3.0 6.0 4.5 0.9 121 chr3R 26845575 intron Lerp - chr3R 26845636 intron Lerp - chr3R 26845696 intron Lerp - chr3R_5_26845001 chr3R_26845001 RAL-508 2260 chr3R 26848042 26848072 chr3R 26848139 26848169 10 95 1.5 5.0 3.2 2.4 127 chr3R 26848042 intron Lerp - chr3R 26848106 intron Lerp - chr3R 26848169 intron Lerp - chr3R_10_26845001 chr3R_26845001 RAL-508 2261 chr3R 26920189 26920233 chr3R 26920455 26920499 15 264 7.0 4.0 5.5 2.3 310 chr3R 26920189 intron sda + chr3R 26920344 intron sda + chr3R 26920499 intron sda + chr3R_15_26920001 chr3R_26920001 RAL-508 2262 chr3R 27007388 27007425 chr3R 27016543 27016580 roo 12 9152 2.5 2.0 2.2 3.8 9192 chr3R 27007388 intron RYa-R + chr3R 27011984 intron RYa-R + chr3R 27016580 intron RYa-R + chr3R_12_27010001 chr3R_27010001 RAL-508 2263 chr3R 27019516 27019544 chr3R 27019608 27019660 11 110 6.5 10.0 8.2 1.2 144 chr3R 27019516 intron,exon RYa-R +,CG17191 - chr3R 27019588 intron,exon RYa-R +,CG17191 - chr3R 27019660 intron,intron RYa-R +,CG17191 - chr3R_11_27015001 chr3R_27015001 RAL-508 2264 chr3R 27027663 27027691 chr3R 27027766 27027793 6 98 6.0 2.0 4.0 1.2 130 chr3R 27027663 intron RYa-R + chr3R 27027728 intron RYa-R + chr3R 27027793 intron RYa-R + chr3R_6_27025001 chr3R_27025001 RAL-508 2265 chr3R 27028709 27028755 chr3R 27028808 27028854 9 99 2.0 4.0 3.0 2.2 145 chr3R 27028709 intron RYa-R + chr3R 27028782 intron RYa-R + chr3R 27028854 intron RYa-R + chr3R_9_27025001 chr3R_27025001 RAL-508 2266 chr3R 27051657 27051677 chr3R 27051767 27051788 5 110 6.0 0.0 3.0 1.2 131 chr3R 27051657 intron RYa-R + chr3R 27051722 intron RYa-R + chr3R 27051788 intron RYa-R + chr3R_5_27050001 chr3R_27050001 RAL-508 2267 chr3R 27101530 27101562 chr3R 27101655 27101688 12 126 2.5 3.5 3.0 3.0 158 chr3R 27101530 exon CG17189 + chr3R 27101609 intron CG17189 + chr3R 27101688 exon CG17189 + chr3R_12_27100001 chr3R_27100001 RAL-508 2268 chr3R 27107144 27107195 chr3R 27107387 27107411 13 241 4.5 4.5 4.5 2.4 267 chr3R 27107144 intergenic not near genes chr3R 27107278 intergenic not near genes chr3R 27107411 intergenic not near genes chr3R_13_27105001 chr3R_27105001 RAL-508 2269 chr3R 27109970 27110023 chr3R 27110066 27110119 13 95 5.0 6.5 5.8 1.9 149 chr3R 27109970 intron,5` UTR gb -,CR45209 + chr3R 27110044 intron,5` UTR gb -,CR45209 + chr3R 27110119 intron,5` UTR gb -,CR45209 + chr3R_13_27110001 chr3R_27110001 RAL-508 2270 chr3R 27140497 27140548 chr3R 27148127 27148178 412 14 7626 4.0 4.5 4.2 2.7 7681 chr3R 27140497 intron CG6051 - chr3R 27144338 intron CG6051 - chr3R 27148178 intron CG6051 - chr3R_14_27140001 chr3R_27140001 RAL-508 2271 chr3R 27200143 27200186 chr3R 27200246 27200269 12 102 6.5 5.0 5.8 1.8 126 chr3R 27200143 intergenic not near genes chr3R 27200206 intergenic not near genes chr3R 27200269 intergenic not near genes chr3R_12_27200001 chr3R_27200001 RAL-508 2272 chr3R 27275829 27275875 chr3R 27275933 27275963 12 102 5.0 2.5 3.8 2.5 134 chr3R 27275829 intron CG5938 + chr3R 27275896 intron CG5938 + chr3R 27275963 intron CG5938 + chr3R_12_27275001 chr3R_27275001 RAL-508 2273 chr3R 27282122 27282137 chr3R 27282255 27282266 4 133 7.0 4.0 5.5 0.6 144 chr3R 27282122 intron mrt - chr3R 27282194 intron mrt - chr3R 27282266 intron mrt - chr3R_4_27280001 chr3R_27280001 RAL-508 2274 chr3R 27300841 27300872 chr3R 27300953 27300984 9 109 5.0 3.5 4.2 1.7 143 chr3R 27300841 intron CG3339 - chr3R 27300912 intron CG3339 - chr3R 27300984 intron CG3339 - chr3R_9_27300001 chr3R_27300001 RAL-508 2275 chr3R 27315977 27315991 chr3R 27316071 27316087 6 96 11.5 3.0 7.2 0.7 110 chr3R 27315977 intron CG3339 - chr3R 27316032 intron CG3339 - chr3R 27316087 exon CG3339 - chr3R_6_27315001 chr3R_27315001 RAL-508 2276 chr3R 27315992 27316012 chr3R 27316068 27316080 8 84 8.0 2.0 5.0 1.3 88 chr3R 27315992 intron CG3339 - chr3R 27316036 intron CG3339 - chr3R 27316080 intron CG3339 - chr3R_8_27315001 chr3R_27315001 RAL-508 2277 chr3R 27317083 27317103 chr3R 27317183 27317200 12 98 11.0 6.5 8.8 1.2 117 chr3R 27317083 intron CG3339 - chr3R 27317142 intron CG3339 - chr3R 27317200 intron CG3339 - chr3R_12_27315001 chr3R_27315001 RAL-508 2278 chr3R 27329475 27329482 chr3R 27329571 27329579 4 97 6.0 3.0 4.5 0.7 104 chr3R 27329475 intergenic CG3330 - chr3R 27329527 intergenic CG3330 - chr3R 27329579 intergenic CG3330 - chr3R_4_27325001 chr3R_27325001 RAL-508 2279 chr3R 27335930 27335958 chr3R 27336031 27336059 11 100 1.0 0.0 0.5 7.3 129 chr3R 27335930 intergenic not near genes chr3R 27335994 intergenic not near genes chr3R 27336059 intergenic not near genes chr3R_11_27335001 chr3R_27335001 RAL-508 2280 chr3R 27342776 27342817 chr3R 27351377 27351418 Tirant 15 8598 10.5 6.5 8.5 1.6 8642 chr3R 27342776 intron CG42534 + chr3R 27347097 intron CG42534 + chr3R 27351418 intron CG42534 + chr3R_15_27345001 chr3R_27345001 RAL-508 2281 chr3R 27377450 27377500 chr3R 27377558 27377602 6 103 3.0 3.5 3.2 1.4 152 chr3R 27377450 3` UTR side - chr3R 27377526 3` UTR side - chr3R 27377602 3` UTR side - chr3R_6_27375001 chr3R_27375001 RAL-508 2282 chr3R 27420152 27420171 chr3R 27420259 27420278 5 105 3.5 5.5 4.5 0.9 126 chr3R 27420152 intron side - chr3R 27420215 intron side - chr3R 27420278 intron side - chr3R_5_27420001 chr3R_27420001 RAL-508 2283 chr3R 27430193 27430239 chr3R 27430336 27430381 15 142 2.0 2.0 2.0 5.0 188 chr3R 27430193 intron side - chr3R 27430287 intron side - chr3R 27430381 intron side - chr3R_15_27430001 chr3R_27430001 RAL-508 2284 chr3R 27492358 27492406 chr3R 27492465 27492513 8 101 3.5 1.5 2.5 2.3 155 chr3R 27492358 intergenic not near genes chr3R 27492436 intergenic not near genes chr3R 27492513 intergenic not near genes chr3R_8_27490001 chr3R_27490001 RAL-508 2285 chr3R 27496578 27496601 chr3R 27496697 27496722 6 123 7.5 3.0 5.2 1.0 144 chr3R 27496578 intergenic not near genes chr3R 27496650 intergenic not near genes chr3R 27496722 intergenic not near genes chr3R_6_27495001 chr3R_27495001 RAL-508 2286 chr3R 27506281 27506293 chr3R 27506382 27506395 5 100 2.0 3.5 2.8 1.3 114 chr3R 27506281 intergenic not near genes chr3R 27506338 intergenic not near genes chr3R 27506395 intergenic not near genes chr3R_5_27505001 chr3R_27505001 RAL-508 2287 chr3R 27511236 27511242 chr3R 27511343 27511347 4 105 11.0 4.0 7.5 0.5 111 chr3R 27511236 intergenic not near genes chr3R 27511292 intergenic not near genes chr3R 27511347 intergenic not near genes chr3R_4_27510001 chr3R_27510001 RAL-508 2288 chr3R 27511245 27511279 chr3R 27511341 27511386 11 106 6.5 3.5 5.0 1.8 141 chr3R 27511245 intergenic not near genes chr3R 27511316 intergenic not near genes chr3R 27511386 intergenic not near genes chr3R_11_27510001 chr3R_27510001 RAL-508 2289 chr3R 27521147 27521168 chr3R 27530376 27530397 roo 4 9229 6.5 3.5 5.0 0.7 9250 chr3R 27521147 intron CG12885 + chr3R 27525772 intron CG12885 + chr3R 27530397 intron CG12885 + chr3R_4_27525001 chr3R_27525001 RAL-508 2290 chr3R 27595031 27595085 chr3R 27595134 27595182 17 99 4.5 3.5 4.0 3.4 151 chr3R 27595031 intron CG5639 - chr3R 27595106 intron CG5639 - chr3R 27595182 intron CG5639 - chr3R_17_27595001 chr3R_27595001 RAL-508 2291 chr3R 27646202 27646212 chr3R 27646302 27646312 5 99 5.5 0.5 3.0 1.2 110 chr3R 27646202 exon tau - chr3R 27646257 intron tau - chr3R 27646312 intron tau - chr3R_5_27645001 chr3R_27645001 RAL-508 2292 chr3R 27646213 27646256 chr3R 27646301 27646348 12 92 3.0 0.5 1.8 4.3 135 chr3R 27646213 exon tau - chr3R 27646280 intron tau - chr3R 27646348 exon tau - chr3R_12_27645001 chr3R_27645001 RAL-508 2293 chr3R 27648608 27648865 chr3R 27648678 27648944 16 87 7.0 2.5 4.8 2.8 336 chr3R 27648608 intron tau - chr3R 27648776 intron tau - chr3R 27648944 intron tau - chr3R_16_27645001 chr3R_27645001 RAL-508 2294 chr3R 27666514 27666564 chr3R 27666711 27666761 15 195 4.5 7.0 5.8 2.2 247 chr3R 27666514 exon unc80 + chr3R 27666638 intron unc80 + chr3R 27666761 intron unc80 + chr3R_15_27665001 chr3R_27665001 RAL-508 2295 chr3R 27706763 27706796 chr3R 27706860 27706888 8 96 4.0 3.5 3.8 1.7 125 chr3R 27706763 intergenic CG12428 -,CG12877 + chr3R 27706826 intergenic CG12428 -,CG12877 + chr3R 27706888 intergenic CG12428 -,CG12877 + chr3R_8_27705001 chr3R_27705001 RAL-508 2296 chr3R 27725557 27725591 chr3R 27731018 27731053 I-element 7 5462 4.5 7.0 5.8 1.0 5496 chr3R 27725557 intergenic not near genes chr3R 27728305 intergenic not near genes chr3R 27731053 intergenic not near genes chr3R_7_27725001 chr3R_27725001 RAL-508 2297 chr3R 27823676 27823726 chr3R 27823815 27823865 12 124 7.5 2.5 5.0 2.0 189 chr3R 27823676 intron CG34353 - chr3R 27823770 intron CG34353 - chr3R 27823865 intron CG34353 - chr3R_12_27820001 chr3R_27820001 RAL-508 2298 chr3R 27832171 27832207 chr3R 27832268 27832314 8 101 2.5 3.0 2.8 2.1 143 chr3R 27832171 intron CG34353 - chr3R 27832242 intron CG34353 - chr3R 27832314 intron CG34353 - chr3R_8_27830001 chr3R_27830001 RAL-508 2299 chr3R 27841091 27841130 chr3R 27841189 27841195 6 91 6.0 7.5 6.8 0.8 104 chr3R 27841091 intron CG34353 - chr3R 27841143 intron CG34353 - chr3R 27841195 intron CG34353 - chr3R_6_27840001 chr3R_27840001 RAL-508 2300 chr3R 27856742 27856785 chr3R 27858244 27858288 hopper2 11 1501 6.0 3.0 4.5 2.0 1546 chr3R 27856742 intron CG34353 - chr3R 27857515 intron CG34353 - chr3R 27858288 intron CG34353 - chr3R_11_27855001 chr3R_27855001 RAL-508 2301 chr3R 27860854 27860879 chr3R 27861263 27861281 13 417 4.0 1.5 2.8 3.4 427 chr3R 27860854 intron CG34353 - chr3R 27861068 intron CG34353 - chr3R 27861281 intron CG34353 - chr3R_13_27860001 chr3R_27860001 RAL-508 2302 chr3R 27862950 27862986 chr3R 27868266 27868279 Transpac 8 5320 5.0 8.0 6.5 1.1 5329 chr3R 27862950 intron CG34353 - chr3R 27865614 intron CG34353 - chr3R 27868279 intron CG34353 - chr3R_8_27865001 chr3R_27865001 RAL-508 2303 chr3R 27871036 27871074 chr3R 27871157 27871191 11 118 5.0 3.0 4.0 2.2 155 chr3R 27871036 intron CG34353 - chr3R 27871114 intron CG34353 - chr3R 27871191 intron CG34353 - chr3R_11_27870001 chr3R_27870001 RAL-508 2304 chr3R 27871075 27871084 chr3R 27871156 27871180 6 101 3.5 3.0 3.2 1.4 105 chr3R 27871075 intron CG34353 - chr3R 27871128 intron CG34353 - chr3R 27871180 intron CG34353 - chr3R_6_27870001 chr3R_27870001 RAL-508 2305 chr3R 27875683 27875726 chr3R 27882756 27882801 297 9 7074 5.0 7.0 6.0 1.3 7118 chr3R 27875683 intron CG34353 - chr3R 27879242 intron CG34353 - chr3R 27882801 intron CG34353 - chr3R_9_27875001 chr3R_27875001 RAL-508 2306 chr3R 28068487 28068518 chr3R 28073938 28073968 I-element 11 5459 1.0 2.5 1.8 3.9 5481 chr3R 28068487 intron CG34362 + chr3R 28071228 intron CG34362 + chr3R 28073968 intron CG34362 + chr3R_11_28070001 chr3R_28070001 RAL-508 2307 chr3R 28118838 28118877 chr3R 28118939 28118976 6 94 5.0 5.5 5.2 1.0 138 chr3R 28118838 intergenic not near genes chr3R 28118907 intergenic not near genes chr3R 28118976 intergenic not near genes chr3R_6_28115001 chr3R_28115001 RAL-508 2308 chr3R 28157187 28157230 chr3R 28157285 28157328 14 92 3.5 4.5 4.0 2.8 141 chr3R 28157187 intron CG34354 + chr3R 28157258 intron CG34354 + chr3R 28157328 intron CG34354 + chr3R_14_28155001 chr3R_28155001 RAL-508 2309 chr3R 28173655 28173680 chr3R 28181105 28181130 mdg1 8 7449 6.5 4.5 5.5 1.2 7475 chr3R 28173655 intron CG34354 + chr3R 28177392 intron CG34354 + chr3R 28181130 intron CG34354 + chr3R_8_28175001 chr3R_28175001 RAL-508 2310 chr3R 28228413 28228455 chr3R 28228526 28228568 11 112 4.0 4.5 4.2 2.1 155 chr3R 28228413 intron CG34354 + chr3R 28228490 intron CG34354 + chr3R 28228568 intron CG34354 + chr3R_11_28225001 chr3R_28225001 RAL-508 2311 chr3R 28231018 28231024 chr3R 28231114 28231122 5 97 5.5 4.0 4.8 0.9 104 chr3R 28231018 intron CG34354 + chr3R 28231070 intron CG34354 + chr3R 28231122 intron CG34354 + chr3R_5_28230001 chr3R_28230001 RAL-508 2312 chr3R 28231026 28231033 chr3R 28231121 28231131 4 97 4.0 7.0 5.5 0.6 105 chr3R 28231026 intron CG34354 + chr3R 28231078 intron CG34354 + chr3R 28231131 intron CG34354 + chr3R_4_28230001 chr3R_28230001 RAL-508 2313 chr3R 28231037 28231048 chr3R 28231104 28231146 5 85 3.0 3.5 3.2 1.2 109 chr3R 28231037 intron CG34354 + chr3R 28231092 intron CG34354 + chr3R 28231146 intron CG34354 + chr3R_5_28230001 chr3R_28230001 RAL-508 2314 chr3R 28253334 28253365 chr3R 28255861 28255895 jockey 10 2528 6.5 2.5 4.5 1.8 2561 chr3R 28253334 intergenic not near genes chr3R 28254614 intergenic not near genes chr3R 28255895 intergenic not near genes chr3R_10_28250001 chr3R_28250001 RAL-508 2315 chr3R 28302086 28302112 chr3R 28302548 28302574 jockey 6 459 4.5 6.0 5.2 1.0 488 chr3R 28302086 intergenic not near genes chr3R 28302330 intergenic not near genes chr3R 28302574 intergenic not near genes chr3R_6_28300001 chr3R_28300001 RAL-508 2316 chr3R 28382141 28382164 chr3R 28382245 28382267 6 101 6.5 7.5 7.0 0.8 126 chr3R 28382141 intergenic not near genes chr3R 28382204 intergenic not near genes chr3R 28382267 intergenic not near genes chr3R_6_28380001 chr3R_28380001 RAL-508 2317 chr3R 28393690 28393731 chr3R 28393806 28393851 10 120 1.5 2.5 2.0 3.3 161 chr3R 28393690 intergenic not near genes chr3R 28393770 intergenic not near genes chr3R 28393851 intergenic not near genes chr3R_10_28390001 chr3R_28390001 RAL-508 2318 chr3R 28445620 28445640 chr3R 28445696 28445749 10 104 3.0 7.0 5.0 1.7 129 chr3R 28445620 intron beat-VI + chr3R 28445684 intron beat-VI + chr3R 28445749 intron beat-VI + chr3R_10_28445001 chr3R_28445001 RAL-508 2319 chr3R 28455011 28455059 chr3R 28455295 28455343 11 283 6.5 7.0 6.8 1.4 332 chr3R 28455011 intron beat-VI + chr3R 28455177 intron beat-VI + chr3R 28455343 intron beat-VI + chr3R_11_28455001 chr3R_28455001 RAL-508 2320 chr3R 28518189 28518236 chr3R 28518289 28518336 7 96 0.0 3.0 1.5 2.8 147 chr3R 28518189 intron Dhc98D + chr3R 28518262 intron Dhc98D + chr3R 28518336 intron Dhc98D + chr3R_7_28515001 chr3R_28515001 RAL-508 2321 chr3R 28616453 28616501 chr3R 28616567 28616615 15 113 3.5 3.0 3.2 3.6 162 chr3R 28616453 intron CG10011 - chr3R 28616534 intron CG10011 - chr3R 28616615 intron CG10011 - chr3R_15_28615001 chr3R_28615001 RAL-508 2322 chr3R 28677410 28677464 chr3R 28677520 28677564 13 107 0.0 3.5 1.8 4.6 154 chr3R 28677410 intron CG9990 + chr3R 28677487 intron CG9990 + chr3R 28677564 intron CG9990 + chr3R_13_28675001 chr3R_28675001 RAL-508 2323 chr3R 28758274 28758301 chr3R 28763910 28763938 roo 7 5636 5.0 4.0 4.5 1.3 5664 chr3R 28758274 intergenic aqrs - chr3R 28761106 intergenic not near genes chr3R 28763938 intergenic not near genes chr3R_7_28760001 chr3R_28760001 RAL-508 2324 chr3R 28792878 28792902 chr3R 28797962 28798017 jockey 4 5107 3.5 3.5 3.5 0.9 5139 chr3R 28792878 intergenic not near genes chr3R 28795448 intergenic not near genes chr3R 28798017 intergenic not near genes chr3R_4_28795001 chr3R_28795001 RAL-508 2325 chr3R 28811584 28811595 chr3R 28811749 28811756 4 164 3.5 5.0 4.2 0.8 172 chr3R 28811584 intergenic wdn - chr3R 28811670 intergenic wdn -,CG1646 + chr3R 28811756 intergenic CG1646 +,wdn - chr3R_4_28810001 chr3R_28810001 RAL-508 2326 chr3R 21907534 21907536 chr3R 28831798 28831802 122 6924266 22.0 18.5 20.2 5.8 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_122_25365001 chr3R_25365001 RAL-508 2327 chr3R 28843062 28843074 chr3R 28843197 28843209 4 135 3.0 2.0 2.5 1.1 147 chr3R 28843062 intron Apc - chr3R 28843136 intron Apc - chr3R 28843209 intron Apc - chr3R_4_28840001 chr3R_28840001 RAL-508 2328 chr3R 28862130 28862171 chr3R 28862227 28862268 10 95 3.5 3.0 3.2 2.4 138 chr3R 28862130 intron spg + chr3R 28862199 intron spg + chr3R 28862268 intron spg + chr3R_10_28860001 chr3R_28860001 RAL-508 2329 chr3R 21907534 21907535 chr3R 29013340 29013340 5 7105806 22.5 21.5 22.0 0.2 7105806 chr3R 21907534 intergenic CG6678 + chr3R 25460437 intron Fur1 - chr3R 29013340 intron wat - chr3R_5_25460001 chr3R_25460001 RAL-508 2330 chr3R 29016651 29016683 chr3R 29016856 29016888 9 204 8.5 2.0 5.2 1.5 237 chr3R 29016651 intron wat - chr3R 29016770 intron wat - chr3R 29016888 intron wat - chr3R_9_29015001 chr3R_29015001 RAL-508 2331 chr3R 29054011 29054048 chr3R 29054106 29054144 14 95 5.0 5.0 5.0 2.3 133 chr3R 29054011 intergenic CG11842 +,CG11843 + chr3R 29054078 intergenic CG11842 +,CG11843 + chr3R 29054144 intergenic CG11843 +,CG11842 + chr3R_14_29050001 chr3R_29050001 RAL-508 2332 chr3R 29079369 29079410 chr3R 29080761 29080788 NOF 12 1389 4.5 4.5 4.5 2.2 1419 chr3R 29079369 intron CG11873 + chr3R 29080078 intron CG11873 + chr3R 29080788 intron CG11873 + chr3R_12_29080001 chr3R_29080001 RAL-508 2333 chr3R 29203834 29203851 chr3R 29203932 29203951 5 100 6.0 0.0 3.0 1.2 117 chr3R 29203834 5` UTR CG14508 - chr3R 29203892 intron CG14508 - chr3R 29203951 intron CG14508 - chr3R_5_29200001 chr3R_29200001 RAL-508 2334 chr3R 29213039 29213088 chr3R 29213142 29213191 14 102 6.0 2.5 4.2 2.7 152 chr3R 29213039 intergenic not near genes chr3R 29213115 intergenic not near genes chr3R 29213191 intergenic not near genes chr3R_14_29210001 chr3R_29210001 RAL-508 2335 chr3R 29237239 29237270 chr3R 29239276 29239307 8 2038 26.5 4.0 15.2 0.5 2068 chr3R 29237239 exon CG11951 - chr3R 29238273 intron CG11951 - chr3R 29239307 exon CG31427 - chr3R_8_29235001 chr3R_29235001 RAL-508 2336 chr3R 29240307 29240344 chr3R 29240411 29240420 4 97 1.5 0.0 0.8 2.2 113 chr3R 29240307 5` UTR CG31427 - chr3R 29240364 intergenic CG31427 -,CG31445 - chr3R 29240420 intergenic CG31427 -,CG31445 - chr3R_4_29240001 chr3R_29240001 RAL-508 2337 chr3R 29265696 29265729 chr3R 29265815 29265852 7 123 3.0 3.5 3.2 1.7 156 chr3R 29265696 intergenic not near genes chr3R 29265774 intergenic not near genes chr3R 29265852 intergenic not near genes chr3R_7_29265001 chr3R_29265001 RAL-508 2338 chr3R 29282803 29282821 chr3R 29282906 29282909 5 101 1.5 11.5 6.5 0.7 106 chr3R 29282803 intergenic not near genes chr3R 29282856 intergenic not near genes chr3R 29282909 intergenic not near genes chr3R_5_29280001 chr3R_29280001 RAL-508 2339 chr3R 29288318 29288347 chr3R 29288463 29288491 10 142 1.5 1.0 1.2 4.5 173 chr3R 29288318 intergenic not near genes chr3R 29288404 intergenic not near genes chr3R 29288491 intergenic not near genes chr3R_10_29285001 chr3R_29285001 RAL-508 2340 chr3R 29319811 29319843 chr3R 29320150 29320182 jockey 10 339 3.0 5.5 4.2 1.9 371 chr3R 29319811 intergenic Cnx99A - chr3R 29319996 intergenic Cnx99A - chr3R 29320182 intergenic not near genes chr3R_10_29315001 chr3R_29315001 RAL-508 2341 chr3R 29335128 29335164 chr3R 29335306 29335335 8 174 4.0 1.5 2.8 2.1 207 chr3R 29335128 intergenic not near genes chr3R 29335232 intergenic not near genes chr3R 29335335 intergenic not near genes chr3R_8_29335001 chr3R_29335001 RAL-508 2342 chr3R 29355942 29355990 chr3R 29356041 29356079 13 98 3.5 2.5 3.0 3.2 137 chr3R 29355942 intergenic CR45547 - chr3R 29356010 intergenic CR45547 - chr3R 29356079 intergenic CR45547 - chr3R_13_29355001 chr3R_29355001 RAL-508 2343 chr3R 29365368 29365406 chr3R 29365470 29365508 10 99 4.5 3.0 3.8 2.1 140 chr3R 29365368 intergenic not near genes chr3R 29365438 intergenic not near genes chr3R 29365508 intergenic not near genes chr3R_10_29365001 chr3R_29365001 RAL-508 2344 chr3R 29406603 29406637 chr3R 29407904 29407927 jockey 7 1302 4.5 2.0 3.2 1.7 1324 chr3R 29406603 intron Ptp99A + chr3R 29407265 intron Ptp99A + chr3R 29407927 intron Ptp99A + chr3R_7_29405001 chr3R_29405001 RAL-508 2345 chr3R 29429771 29429802 chr3R 29429869 29429891 9 94 4.5 3.5 4.0 1.8 120 chr3R 29429771 intron Ptp99A + chr3R 29429831 intron Ptp99A + chr3R 29429891 intron Ptp99A + chr3R_9_29425001 chr3R_29425001 RAL-508 2346 chr3R 29449338 29449384 chr3R 29449436 29449482 16 97 5.0 3.0 4.0 3.2 144 chr3R 29449338 intron Ptp99A + chr3R 29449410 intron Ptp99A + chr3R 29449482 intron Ptp99A + chr3R_16_29445001 chr3R_29445001 RAL-508 2347 chr3R 29471990 29472019 chr3R 29472102 29472132 5 105 6.5 5.5 6.0 0.7 142 chr3R 29471990 intron Ptp99A + chr3R 29472061 intron Ptp99A + chr3R 29472132 intron Ptp99A + chr3R_5_29470001 chr3R_29470001 RAL-508 2348 chr3R 29518285 29518334 chr3R 29518384 29518402 25 95 4.0 7.0 5.5 3.8 117 chr3R 29518285 intergenic not near genes chr3R 29518344 intergenic not near genes chr3R 29518402 intergenic not near genes chr3R_25_29515001 chr3R_29515001 RAL-508 2349 chr3R 29566372 29566412 chr3R 29566469 29566509 6 97 2.5 4.5 3.5 1.3 137 chr3R 29566372 intergenic not near genes chr3R 29566440 intergenic not near genes chr3R 29566509 intergenic not near genes chr3R_6_29565001 chr3R_29565001 RAL-508 2350 chr3R 29581532 29581557 chr3R 29581633 29581658 7 101 2.0 6.0 4.0 1.4 126 chr3R 29581532 intergenic not near genes chr3R 29581595 intergenic not near genes chr3R 29581658 intergenic not near genes chr3R_7_29580001 chr3R_29580001 RAL-508 2351 chr3R 29590357 29590371 chr3R 29590470 29590484 5 113 2.0 3.0 2.5 1.4 127 chr3R 29590357 exon CG31041 - chr3R 29590420 intron CG31041 - chr3R 29590484 intron CG31041 - chr3R_5_29590001 chr3R_29590001 RAL-508 2352 chr3R 29590377 29590395 chr3R 29590469 29590508 5 106 1.5 3.0 2.2 1.6 131 chr3R 29590377 intron CG31041 - chr3R 29590442 intron CG31041 - chr3R 29590508 exon CG31041 - chr3R_5_29590001 chr3R_29590001 RAL-508 2353 chr3R 29595349 29595398 chr3R 29595466 29595515 10 114 2.5 3.5 3.0 2.5 166 chr3R 29595349 intron alph + chr3R 29595432 intron alph + chr3R 29595515 intron alph + chr3R_10_29595001 chr3R_29595001 RAL-508 2354 chr3R 29655637 29655670 chr3R 29655732 29655769 16 97 7.5 3.0 5.2 2.6 132 chr3R 29655637 intron Dop1R2 - chr3R 29655703 intron Dop1R2 - chr3R 29655769 intron Dop1R2 - chr3R_16_29655001 chr3R_29655001 RAL-508 2355 chr3R 29738246 29738296 chr3R 29739732 29739776 hobo 14 1484 5.0 1.0 3.0 3.5 1530 chr3R 29738246 intergenic CG1969 +,CG7598 + chr3R 29739011 intron CG1969 + chr3R 29739776 5` UTR CG1969 + chr3R_14_29735001 chr3R_29735001 RAL-508 2356 chr3R 29758919 29758962 chr3R 29759017 29759026 9 88 6.0 0.0 3.0 2.2 107 chr3R 29758919 3` UTR CR44953 - chr3R 29758972 3` UTR CR44953 - chr3R 29759026 3` UTR CR44953 - chr3R_9_29755001 chr3R_29755001 RAL-508 2357 chr3R 29760355 29760390 chr3R 29761576 29761609 pogo 7 1218 2.0 2.5 2.2 2.2 1254 chr3R 29760355 intergenic not near genes chr3R 29760982 intergenic not near genes chr3R 29761609 intergenic not near genes chr3R_7_29760001 chr3R_29760001 RAL-508 2358 chr3R 29773882 29773892 chr3R 29773989 29773989 6 108 2.0 0.0 1.0 3.0 107 chr3R 29773882 intron kay + chr3R 29773936 intron kay + chr3R 29773989 intron kay + chr3R_6_29770001 chr3R_29770001 RAL-508 2359 chr3R 29882000 29882051 chr3R 29891177 29891228 roo 15 9177 6.0 3.0 4.5 2.7 9228 chr3R 29882000 intron CG31038 + chr3R 29886614 intron CG31038 + chr3R 29891228 intron CG31038 + chr3R_15_29885001 chr3R_29885001 RAL-508 2360 chr3R 29950556 29950591 chr3R 29950653 29950687 7 89 7.5 7.0 7.2 0.9 131 chr3R 29950556 intergenic TkR99D - chr3R 29950622 intergenic TkR99D - chr3R 29950687 intergenic TkR99D - chr3R_7_29950001 chr3R_29950001 RAL-508 2361 chr3R 30030432 30030462 chr3R 30030514 30030534 9 81 2.0 2.0 2.0 3.0 102 chr3R 30030432 intron Axn + chr3R 30030483 intron Axn + chr3R 30030534 intron Axn + chr3R_9_30030001 chr3R_30030001 RAL-508 2362 chr3R 30084849 30084865 chr3R 30086334 30086352 hobo 4 1483 2.5 4.0 3.2 1.0 1503 chr3R 30084849 intron sima + chr3R 30085600 intron sima + chr3R 30086352 intron sima + chr3R_4_30085001 chr3R_30085001 RAL-508 2363 chr3R 30136955 30136971 chr3R 30137049 30137067 5 97 2.0 4.5 3.2 1.2 112 chr3R 30136955 exon AdoR - chr3R 30137011 intron AdoR - chr3R 30137067 intron AdoR - chr3R_5_30135001 chr3R_30135001 RAL-508 2364 chr3R 30182737 30182786 chr3R 30182896 30182945 15 158 4.0 6.0 5.0 2.5 208 chr3R 30182737 intergenic not near genes chr3R 30182841 intergenic not near genes chr3R 30182945 intergenic not near genes chr3R_15_30180001 chr3R_30180001 RAL-508 2365 chr3R 30183686 30183730 chr3R 30183797 30183840 10 110 3.0 0.0 1.5 4.0 154 chr3R 30183686 intergenic CR44262 - chr3R 30183763 intergenic CR44262 - chr3R 30183840 intergenic CR44262 - chr3R_10_30180001 chr3R_30180001 RAL-508 2366 chr3R 30257605 30257638 chr3R 30257855 30257886 16 250 5.5 4.0 4.8 2.8 281 chr3R 30257605 intergenic not near genes chr3R 30257746 intergenic not near genes chr3R 30257886 intergenic not near genes chr3R_16_30255001 chr3R_30255001 RAL-508 2367 chr3R 30268226 30268448 chr3R 30268323 30268499 20 93 3.0 3.0 3.0 5.0 273 chr3R 30268226 intergenic not near genes chr3R 30268362 intergenic not near genes chr3R 30268499 intergenic not near genes chr3R_20_30265001 chr3R_30265001 RAL-508 2368 chr3R 30283945 30283962 chr3R 30284139 30284156 5 193 5.0 1.0 3.0 1.2 211 chr3R 30283945 intron hdc + chr3R 30284050 intron hdc + chr3R 30284156 intron hdc + chr3R_5_30280001 chr3R_30280001 RAL-508 2369 chr3R 30307132 30307147 chr3R 30307207 30307247 4 77 5.0 6.0 5.5 0.6 115 chr3R 30307132 intron hdc + chr3R 30307190 intron hdc + chr3R 30307247 intron hdc + chr3R_4_30305001 chr3R_30305001 RAL-508 2370 chr3R 30315611 30315621 chr3R 30315714 30315722 7 101 9.0 10.0 9.5 0.7 111 chr3R 30315611 intron hdc + chr3R 30315666 intron hdc + chr3R 30315722 intron hdc + chr3R_7_30315001 chr3R_30315001 RAL-508 2371 chr3R 30317303 30317343 chr3R 30324915 30324955 roo 5 7612 1.0 6.0 3.5 1.1 7652 chr3R 30317303 intron hdc + chr3R 30321129 intron hdc + chr3R 30324955 intron hdc + chr3R_5_30320001 chr3R_30320001 RAL-508 2372 chr3R 30375534 30375572 chr3R 30383169 30383215 412 5 7641 1.5 3.0 2.2 1.6 7681 chr3R 30375534 intergenic not near genes chr3R 30379374 intergenic not near genes chr3R 30383215 intergenic not near genes chr3R_5_30375001 chr3R_30375001 RAL-508 2373 chr3R 30425473 30425515 chr3R 30425594 30425637 6 122 2.0 3.0 2.5 1.7 164 chr3R 30425473 3` UTR CG2218 - chr3R 30425555 3` UTR CG2218 - chr3R 30425637 3` UTR CG2218 - chr3R_6_30425001 chr3R_30425001 RAL-508 2374 chr3R 30456371 30456422 chr3R 30456471 30456521 10 100 1.0 4.0 2.5 2.9 150 chr3R 30456371 intergenic CG2224 - chr3R 30456446 3` UTR CG2224 - chr3R 30456521 3` UTR CG2224 - chr3R_10_30455001 chr3R_30455001 RAL-508 2375 chr3R 30480461 30480481 chr3R 30482945 30482960 jockey 6 2481 7.5 7.5 7.5 0.7 2499 chr3R 30480461 intron PH4alphaEFB + chr3R 30481710 intron PH4alphaEFB + chr3R 30482960 intron PH4alphaEFB + chr3R_6_30480001 chr3R_30480001 RAL-508 2376 chr3R 30480482 30480505 chr3R 30482942 30482993 jockey 8 2477 3.5 6.0 4.8 1.4 2511 chr3R 30480482 intron PH4alphaEFB + chr3R 30481738 intron PH4alphaEFB + chr3R 30482993 intron PH4alphaEFB + chr3R_8_30480001 chr3R_30480001 RAL-508 2377 chr3R 30488105 30488122 chr3R 30488204 30488221 4 99 2.5 0.0 1.2 1.8 116 chr3R 30488105 intergenic Jon99Fii - chr3R 30488163 intergenic Jon99Fii - chr3R 30488221 intergenic Jon99Fii - chr3R_4_30485001 chr3R_30485001 RAL-508 2378 chr3R 30495305 30495341 chr3R 30495405 30495421 13 96 2.0 4.5 3.2 3.1 116 chr3R 30495305 intron PH4alphaMP - chr3R 30495363 intron PH4alphaMP - chr3R 30495421 intron PH4alphaMP - chr3R_13_30495001 chr3R_30495001 RAL-508 2379 chr3R 30544647 30544684 chr3R 30544734 30544737 16 71 1.5 2.5 2.0 5.3 90 chr3R 30544647 intron tmod + chr3R 30544692 intron tmod + chr3R 30544737 intron tmod + chr3R_16_30540001 chr3R_30540001 RAL-508 2380 chr3R 30558131 30558148 chr3R 30558232 30558249 4 99 4.5 3.5 4.0 0.8 118 chr3R 30558131 intron,intron tmod +,CG34155 - chr3R 30558190 intron,intron tmod +,CG34155 - chr3R 30558249 intron,intron tmod +,CG34155 - chr3R_4_30555001 chr3R_30555001 RAL-508 2381 chr3R 30600784 30600813 chr3R 30600893 30600928 13 115 6.0 5.5 5.8 1.9 144 chr3R 30600784 intron CG2246 - chr3R 30600856 intron CG2246 - chr3R 30600928 intron CG2246 - chr3R_13_30600001 chr3R_30600001 RAL-508 2382 chr3R 30627597 30627613 chr3R 30627691 30627692 4 91 5.0 6.0 5.5 0.6 95 chr3R 30627597 3` UTR CG2267 - chr3R 30627644 exon CG2267 - chr3R 30627692 exon CG2267 - chr3R_4_30625001 chr3R_30625001 RAL-508 2383 chr3R 30627625 30627638 chr3R 30627689 30627701 6 74 2.5 5.5 4.0 1.2 76 chr3R 30627625 exon CG2267 - chr3R 30627663 exon CG2267 - chr3R 30627701 exon CG2267 - chr3R_6_30625001 chr3R_30625001 RAL-508 2384 chr3R 30679503 30679549 chr3R 30686991 30687038 blood 9 7484 2.5 5.0 3.8 1.9 7535 chr3R 30679503 intergenic not near genes chr3R 30683270 intergenic not near genes chr3R 30687038 intergenic not near genes chr3R_9_30680001 chr3R_30680001 RAL-508 2385 chr3R 30798298 30798346 chr3R 30798400 30798448 19 100 4.0 6.0 5.0 3.2 150 chr3R 30798298 intron wts - chr3R 30798373 intron wts - chr3R 30798448 intron wts - chr3R_19_30795001 chr3R_30795001 RAL-508 2386 chr3R 30818796 30818846 chr3R 30820381 30820415 1360 12 1582 4.5 3.0 3.8 2.5 1619 chr3R 30818796 intron cindr + chr3R 30819606 intron cindr + chr3R 30820415 intron cindr + chr3R_12_30815001 chr3R_30815001 RAL-508 2387 chr3R 30823395 30823415 chr3R 30823509 30823512 5 109 2.0 5.5 3.8 1.0 117 chr3R 30823395 intron cindr + chr3R 30823454 intron cindr + chr3R 30823512 intron cindr + chr3R_5_30820001 chr3R_30820001 RAL-508 2388 chr3R 30850230 30850269 chr3R 30850342 30850381 12 112 5.0 5.0 5.0 2.0 151 chr3R 30850230 intergenic not near genes chr3R 30850306 intergenic not near genes chr3R 30850381 intergenic not near genes chr3R_12_30850001 chr3R_30850001 RAL-508 2389 chr3R 30888920 30888949 chr3R 30893431 30893472 17 4510 33.5 36.5 35.0 0.5 4552 chr3R 30888920 exon Sap-r - chr3R 30891196 intergenic not near genes chr3R 30893472 intergenic not near genes chr3R_17_30890001 chr3R_30890001 RAL-508 2390 chr3R 31029671 31029720 chr3R 31029776 31029825 10 103 5.5 11.5 8.5 1.1 154 chr3R 31029671 intergenic not near genes chr3R 31029748 intergenic not near genes chr3R 31029825 intergenic not near genes chr3R_10_31025001 chr3R_31025001 RAL-508 2391 chr3R 31042100 31042117 chr3R 31042207 31042222 9 105 13.0 6.0 9.5 0.9 122 chr3R 31042100 intron CanA1 + chr3R 31042161 intron CanA1 + chr3R 31042222 intron CanA1 + chr3R_9_31040001 chr3R_31040001 RAL-508 2392 chr3R 31042118 31042142 chr3R 31042198 31042222 7 96 8.0 5.0 6.5 0.9 104 chr3R 31042118 intron CanA1 + chr3R 31042170 intron CanA1 + chr3R 31042222 intron CanA1 + chr3R_7_31040001 chr3R_31040001 RAL-508 2393 chr3R 31043263 31043270 chr3R 31043388 31043395 6 125 8.0 3.5 5.8 0.9 132 chr3R 31043263 intron CanA1 + chr3R 31043329 intron CanA1 + chr3R 31043395 exon CanA1 + chr3R_6_31040001 chr3R_31040001 RAL-508 2394 chr3R 31043274 31043292 chr3R 31043386 31043416 15 121 6.0 3.0 4.5 2.7 142 chr3R 31043274 intron CanA1 + chr3R 31043345 intron CanA1 + chr3R 31043416 exon CanA1 + chr3R_15_31040001 chr3R_31040001 RAL-508 2395 chr3R 31047194 31047235 chr3R 31047508 31047549 10 314 4.5 4.5 4.5 1.8 355 chr3R 31047194 intergenic CanA1 + chr3R 31047372 intergenic not near genes chr3R 31047549 intergenic not near genes chr3R_10_31045001 chr3R_31045001 RAL-508 2396 chr3R 31047820 31047830 chr3R 31047934 31047946 8 115 3.0 1.5 2.2 2.5 126 chr3R 31047820 intergenic not near genes chr3R 31047883 intergenic not near genes chr3R 31047946 intergenic not near genes chr3R_8_31045001 chr3R_31045001 RAL-508 2397 chr3R 31069637 31069670 chr3R 31069742 31069782 10 113 2.0 3.5 2.8 2.6 145 chr3R 31069637 intron Sox100B + chr3R 31069710 intron Sox100B + chr3R 31069782 intron Sox100B + chr3R_10_31065001 chr3R_31065001 RAL-508 2398 chr3R 31074211 31074254 chr3R 31081839 31081886 springer 8 7625 2.5 0.0 1.2 3.6 7675 chr3R 31074211 intron Sox100B + chr3R 31078048 intron Sox100B + chr3R 31081886 intron Sox100B + chr3R_8_31075001 chr3R_31075001 RAL-508 2399 chr3R 31102031 31102076 chr3R 31102131 31102156 9 93 0.0 5.0 2.5 2.6 125 chr3R 31102031 intergenic not near genes chr3R 31102094 intergenic not near genes chr3R 31102156 intergenic not near genes chr3R_9_31100001 chr3R_31100001 RAL-508 2400 chr3R 31274342 31274396 chr3R 31274440 31274493 20 93 2.5 3.5 3.0 5.0 151 chr3R 31274342 intergenic not near genes chr3R 31274418 intergenic not near genes chr3R 31274493 intergenic not near genes chr3R_20_31270001 chr3R_31270001 RAL-508 2401 chr3R 31279362 31279393 chr3R 31285569 31285604 diver 7 6209 3.5 0.5 2.0 2.3 6242 chr3R 31279362 intergenic not near genes chr3R 31282483 intergenic not near genes chr3R 31285604 intergenic not near genes chr3R_7_31280001 chr3R_31280001 RAL-508 2402 chr3R 31413088 31413095 chr3R 31418294 31418315 copia 5 5216 4.0 1.0 2.5 1.4 5227 chr3R 31413088 intron Gprk2 + chr3R 31415702 intron Gprk2 + chr3R 31418315 intron Gprk2 + chr3R_5_31415001 chr3R_31415001 RAL-508 2403 chr3R 31413096 31413123 chr3R 31418288 31418306 copia 5 5201 1.0 1.0 1.0 2.5 5210 chr3R 31413096 intron Gprk2 + chr3R 31415701 intron Gprk2 + chr3R 31418306 intron Gprk2 + chr3R_5_31415001 chr3R_31415001 RAL-508 2404 chr3R 31424984 31425004 chr3R 31425090 31425094 4 99 5.5 5.5 5.5 0.6 110 chr3R 31424984 intron Gprk2 + chr3R 31425039 intron Gprk2 + chr3R 31425094 intron Gprk2 + chr3R_4_31425001 chr3R_31425001 RAL-508 2405 chr3R 31426860 31426912 chr3R 31426972 31426975 16 109 2.0 4.0 3.0 4.0 115 chr3R 31426860 intron Gprk2 + chr3R 31426918 intron Gprk2 + chr3R 31426975 intron Gprk2 + chr3R_16_31425001 chr3R_31425001 RAL-508 2406 chr3R 31435343 31435354 chr3R 31435515 31435526 6 172 18.5 6.5 12.5 0.4 183 chr3R 31435343 intron Gprk2 + chr3R 31435434 intron Gprk2 + chr3R 31435526 intron Gprk2 + chr3R_6_31435001 chr3R_31435001 RAL-508 2407 chr3R 31435356 31435391 chr3R 31435513 31435563 12 169 5.5 6.5 6.0 1.7 207 chr3R 31435356 intron Gprk2 + chr3R 31435460 intron Gprk2 + chr3R 31435563 intron Gprk2 + chr3R_12_31435001 chr3R_31435001 RAL-508 2408 chr3R 31448353 31448395 chr3R 31448462 31448516 13 112 2.5 3.0 2.8 3.4 163 chr3R 31448353 intron Gprk2 + chr3R 31448434 intron Gprk2 + chr3R 31448516 intron Gprk2 + chr3R_13_31445001 chr3R_31445001 RAL-508 2409 chr3R 31453204 31453249 chr3R 31453300 31453347 18 93 5.0 8.0 6.5 2.4 143 chr3R 31453204 intron Gprk2 + chr3R 31453276 intron Gprk2 + chr3R 31453347 exon Gprk2 + chr3R_18_31450001 chr3R_31450001 RAL-508 2410 chr3R 31522653 31522698 chr3R 31522763 31522787 15 107 0.0 7.5 3.8 3.1 134 chr3R 31522653 3` UTR CR45573 - chr3R 31522720 3` UTR CR45573 - chr3R 31522787 3` UTR CR45573 - chr3R_15_31520001 chr3R_31520001 RAL-508 2411 chr3R 31599770 31599811 chr3R 31599870 31599910 13 102 3.5 3.0 3.2 3.1 140 chr3R 31599770 intron CycG - chr3R 31599840 intron CycG - chr3R 31599910 intron CycG - chr3R_13_31595001 chr3R_31595001 RAL-508 2412 chr3R 31627029 31627060 chr3R 31627543 31627546 10 516 2.5 3.5 3.0 2.5 517 chr3R 31627029 intron kek6 + chr3R 31627288 intron kek6 + chr3R 31627546 intron kek6 + chr3R_10_31625001 chr3R_31625001 RAL-508 2413 chr3R 31691517 31691558 chr3R 31696303 31696342 Doc 14 4784 5.0 6.5 5.8 2.1 4825 chr3R 31691517 intergenic not near genes chr3R 31693930 intergenic not near genes chr3R 31696342 intergenic not near genes chr3R_14_31690001 chr3R_31690001 RAL-508 2414 chr3R 31831516 31831569 chr3R 31831614 31831668 19 97 6.0 7.0 6.5 2.5 152 chr3R 31831516 intron RhoGAP100F + chr3R 31831592 intron RhoGAP100F + chr3R 31831668 intron RhoGAP100F + chr3R_19_31830001 chr3R_31830001 RAL-508 2415 chr3R 31865027 31865064 chr3R 31865125 31865174 7 106 0.0 1.0 0.5 4.7 147 chr3R 31865027 intron heph - chr3R 31865100 intron heph - chr3R 31865174 exon heph - chr3R_7_31865001 chr3R_31865001 RAL-508 2416 chr3R 31924554 31924606 chr3R 31924653 31924707 9 99 0.0 3.5 1.8 3.2 153 chr3R 31924554 intron heph - chr3R 31924630 intron heph - chr3R 31924707 intron heph - chr3R_9_31920001 chr3R_31920001 RAL-508 2417 chr3R 31925671 31925721 chr3R 31925767 31925812 9 95 2.0 5.5 3.8 1.9 141 chr3R 31925671 intron heph - chr3R 31925742 intron heph - chr3R 31925812 intron heph - chr3R_9_31925001 chr3R_31925001 RAL-508 2418 chr3R 31931175 31931215 chr3R 31931277 31931318 14 101 2.0 2.5 2.2 4.4 143 chr3R 31931175 intron heph - chr3R 31931246 intron heph - chr3R 31931318 intron heph - chr3R_14_31930001 chr3R_31930001 RAL-508 2419 chr3R 31960661 31960704 chr3R 31961868 31961914 12 1208 5.0 5.0 5.0 2.0 1253 chr3R 31960661 intron heph - chr3R 31961288 intron heph - chr3R 31961914 intron heph - chr3R_12_31960001 chr3R_31960001 RAL-508 2420 chr3R 31998006 31998023 chr3R 32005476 32005502 blood 12 7486 4.5 7.5 6.0 1.7 7496 chr3R 31998006 intron heph - chr3R 32001754 intron heph - chr3R 32005502 intron heph - chr3R_12_32000001 chr3R_32000001 RAL-508 2421 chr3R 32034256 32034291 chr3R 32034342 32034372 12 98 3.5 5.5 4.5 2.2 116 chr3R 32034256 intergenic not near genes chr3R 32034314 intergenic not near genes chr3R 32034372 intergenic not near genes chr3R_12_32030001 chr3R_32030001 RAL-508 2422 chr3R 32061685 32061728 chr3R 32062009 32062052 10 325 17.0 15.0 16.0 0.6 367 chr3R 32061685 intron Map205 - chr3R 32061868 intron Map205 - chr3R 32062052 intron Map205 - chr3R_10_32060001 chr3R_32060001 RAL-508 2423 chr4 76477 76515 chr4 81940 81978 I-element 15 5457 8.5 4.0 6.2 2.1 5501 chr4 76477 intron pan + chr4 79228 intron pan + chr4 81978 intron pan + chr4_15_75001 chr4_75001 RAL-508 2424 chr4 280785 280835 chr4 281435 281463 6 646 1.0 2.0 1.5 2.4 678 chr4 280785 intron Syt7 - chr4 281124 intron Syt7 - chr4 281463 intron Syt7 - chr4_6_280001 chr4_280001 RAL-508 2425 chr4 314499 314516 chr4 314597 314614 4 98 0.5 1.0 0.8 2.2 115 chr4 314499 intergenic Zip102B -,CG32850 + chr4 314556 intergenic CG32850 +,Zip102B - chr4 314614 intergenic CG32850 + chr4_4_310001 chr4_310001 RAL-508 2426 chr4 368695 368710 chr4 368847 368862 5 152 2.5 3.0 2.8 1.3 167 chr4 368695 intron Hcf + chr4 368778 intron Hcf + chr4 368862 intron Hcf + chr4_5_365001 chr4_365001 RAL-508 2427 chr4 671584 671631 chr4 680187 680234 Tirant 9 8603 4.5 6.5 5.5 1.4 8650 chr4 671584 intron CG11360 + chr4 675909 intron CG11360 + chr4 680234 intron CG11360 + chr4_9_675001 chr4_675001 RAL-508 2428 chr4 959606 959651 chr4 959804 959850 10 198 2.0 2.0 2.0 3.3 244 chr4 959606 intergenic CR44030 +,CR45201 - chr4 959728 5` UTR CR44030 + chr4 959850 5` UTR CR44030 + chr4_10_955001 chr4_955001 RAL-508 2429 chr4 972480 972525 chr4 972582 972627 8 101 2.0 2.0 2.0 2.7 147 chr4 972480 intron fuss - chr4 972554 intron fuss - chr4 972627 intron fuss - chr4_8_970001 chr4_970001 RAL-508 2430 chrX 295838 295876 chrX 303478 303516 412 11 7639 1.5 8.0 4.8 1.9 7678 chrX 295838 intron CG3777 + chrX 299677 intron CG3777 + chrX 303516 intron CG3777 + chrX_11_295001 chrX_295001 RAL-508 2431 chrX 318454 318485 chrX 323560 323587 flea 10 5105 2.5 3.0 2.8 2.6 5133 chrX 318454 intron,intron CG3777 +,CG32816 - chrX 321020 intron,intron CG3777 +,CG32816 - chrX 323587 intron,intron CG3777 +,CG32816 - chrX_10_320001 chrX_320001 RAL-508 2432 chrX 428409 428447 chrX 434614 434652 3S18 11 6203 6.5 2.5 4.5 2.0 6243 chrX 428409 intron CG32816 - chrX 431530 intron CG32816 - chrX 434652 intron CG32816 - chrX_11_430001 chrX_430001 RAL-508 2433 chrX 494612 494635 chrX 494688 494740 9 104 4.0 4.0 4.0 1.8 128 chrX 494612 intergenic CG17778 + chrX 494676 5` UTR CG17778 + chrX 494740 intron CG17778 + chrX_9_490001 chrX_490001 RAL-508 2434 chrX 547614 547665 chrX 547878 547929 17 261 3.5 7.5 5.5 2.6 315 chrX 547614 intron Appl + chrX 547772 intron Appl + chrX 547929 intron Appl + chrX_17_545001 chrX_545001 RAL-508 2435 chrX 551411 551454 chrX 558988 559033 412 14 7575 4.0 2.5 3.2 3.3 7622 chrX 551411 intron Appl + chrX 555222 intron Appl + chrX 559033 intron Appl + chrX_14_555001 chrX_555001 RAL-508 2436 chrX 726079 726114 chrX 726173 726180 10 90 0.5 3.5 2.0 3.3 101 chrX 726079 intron sdk + chrX 726130 intron sdk + chrX 726180 intron sdk + chrX_10_725001 chrX_725001 RAL-508 2437 chrX 802283 802319 chrX 802365 802404 14 92 6.0 2.5 4.2 2.7 121 chrX 802283 exon CG13359 - chrX 802344 exon CG13359 - chrX 802404 exon CG13359 - chrX_14_800001 chrX_800001 RAL-508 2438 chrX 812256 812298 chrX 817905 817949 297 6 5650 1.5 5.0 3.2 1.4 5693 chrX 812256 intron CG43867 - chrX 815102 intron CG43867 - chrX 817949 intron CG43867 - chrX_6_815001 chrX_815001 RAL-508 2439 chrX 826366 826411 chrX 826547 826592 13 175 5.5 5.0 5.2 2.1 226 chrX 826366 intron CG43867 - chrX 826479 intron CG43867 - chrX 826592 intron CG43867 - chrX_13_825001 chrX_825001 RAL-508 2440 chrX 827591 827631 chrX 835393 835442 roo 15 7807 4.5 4.5 4.5 2.7 7851 chrX 827591 intron CG43867 - chrX 831516 intron CG43867 - chrX 835442 intron CG43867 - chrX_15_830001 chrX_830001 RAL-508 2441 chrX 837427 837449 chrX 837516 837560 7 110 2.0 2.0 2.0 2.3 133 chrX 837427 intron CG43867 - chrX 837494 intron CG43867 - chrX 837560 intron CG43867 - chrX_7_835001 chrX_835001 RAL-508 2442 chrX 857674 857717 chrX 857776 857819 12 99 1.5 1.5 1.5 4.8 145 chrX 857674 intron CG43867 - chrX 857746 intron CG43867 - chrX 857819 intron CG43867 - chrX_12_855001 chrX_855001 RAL-508 2443 chrX 906688 906733 chrX 908490 908542 S-element 16 1804 4.0 3.0 3.5 3.6 1854 chrX 906688 intron CG43867 - chrX 907615 intron CG43867 - chrX 908542 intron CG43867 - chrX_16_905001 chrX_905001 RAL-508 2444 chrX 1051071 1051086 chrX 1051168 1051184 4 97 7.0 11.0 9.0 0.4 113 chrX 1051071 intron CR44779 + chrX 1051128 intron CR44779 + chrX 1051184 intron CR44779 + chrX_4_1050001 chrX_1050001 RAL-508 2445 chrX 1053117 1053120 chrX 16983076 16983077 11 15929958 14.0 9.0 11.5 0.9 15929960 chrX 1053117 intron CR44779 + chrX 9018097 intron,intron rdgA +,CR43836 - chrX 16983077 intron CG45002 - chrX_11_9015001 chrX_9015001 RAL-508 2446 chrX 1163276 1163329 chrX 1163374 1163427 15 97 3.5 3.5 3.5 3.3 151 chrX 1163276 intergenic CG34320 - chrX 1163352 intergenic CG34320 - chrX 1163427 intergenic CG34320 - chrX_15_1160001 chrX_1160001 RAL-508 2447 chrX 1169759 1169770 chrX 1169847 1169875 5 98 7.0 5.0 6.0 0.7 116 chrX 1169759 intergenic not near genes chrX 1169817 intergenic not near genes chrX 1169875 intergenic not near genes chrX_5_1165001 chrX_1165001 RAL-508 2448 chrX 1169771 1169788 chrX 1169839 1169864 6 92 4.5 3.5 4.0 1.2 93 chrX 1169771 intergenic not near genes chrX 1169818 intergenic not near genes chrX 1169864 intergenic not near genes chrX_6_1165001 chrX_1165001 RAL-508 2449 chrX 1238778 1238818 chrX 1240967 1241007 14 2186 12.5 21.5 17.0 0.8 2229 chrX 1238778 exon CG11403 - chrX 1239892 intergenic CG11403 - chrX 1241007 intergenic not near genes chrX_14_1235001 chrX_1235001 RAL-508 2450 chrX 1335133 1335176 chrX 1335244 1335287 9 111 2.5 7.5 5.0 1.5 154 chrX 1335133 intron CG11409 - chrX 1335210 intron CG11409 - chrX 1335287 intron CG11409 - chrX_9_1335001 chrX_1335001 RAL-508 2451 chrX 1357765 1357804 chrX 1367953 1367993 Doc 14 10189 5.5 2.5 4.0 2.8 10228 chrX 1357765 intergenic png - chrX 1362879 intergenic not near genes chrX 1367993 intergenic not near genes chrX_14_1360001 chrX_1360001 RAL-508 2452 chrX 1515212 1515218 chrX 1515309 1515313 4 96 5.5 3.5 4.5 0.7 101 chrX 1515212 intron inc + chrX 1515262 intron inc + chrX 1515313 intron inc + chrX_4_1515001 chrX_1515001 RAL-508 2453 chrX 1515220 1515246 chrX 1515305 1515343 4 91 2.5 2.5 2.5 1.1 123 chrX 1515220 intron inc + chrX 1515282 intron inc + chrX 1515343 intron inc + chrX_4_1515001 chrX_1515001 RAL-508 2454 chrX 1572057 1572076 chrX 1572177 1572214 8 134 0.5 1.5 1.0 4.0 157 chrX 1572057 intron Mur2B - chrX 1572136 intron Mur2B - chrX 1572214 intron Mur2B - chrX_8_1570001 chrX_1570001 RAL-508 2455 chrX 1627964 1627999 chrX 1635447 1635453 gtwin 6 7480 4.0 4.5 4.2 1.2 7489 chrX 1627964 intron,intron Mur2B -,br + chrX 1631708 intron,intron Mur2B -,br + chrX 1635453 intron,intron Mur2B -,br + chrX_6_1630001 chrX_1630001 RAL-508 2456 chrX 2069354 2069366 chrX 2069474 2069484 6 119 2.0 2.0 2.0 2.0 130 chrX 2069354 intron,exon CG4199 -,CG4194 + chrX 2069419 intron,3` UTR CG4199 -,CG4194 + chrX 2069484 intron,3` UTR CG4199 -,CG4194 + chrX_6_2065001 chrX_2065001 RAL-508 2457 chrX 2146636 2146683 chrX 2146747 2146756 8 103 4.5 4.0 4.2 1.5 120 chrX 2146636 intron Pgd + chrX 2146696 intron Pgd + chrX 2146756 intron Pgd + chrX_8_2145001 chrX_2145001 RAL-508 2458 chrX 2399832 2399844 chrX 2408188 2408213 roo 5 8361 7.5 3.5 5.5 0.8 8381 chrX 2399832 intergenic not near genes chrX 2404022 intergenic not near genes chrX 2408213 intergenic not near genes chrX_5_2400001 chrX_2400001 RAL-508 2459 chrX 2578806 2578831 chrX 2578930 2578955 8 124 3.5 5.5 4.5 1.5 149 chrX 2578806 intergenic Pdfr +,Vha36-3 - chrX 2578880 intergenic Vha36-3 -,Pdfr + chrX 2578955 intergenic Vha36-3 -,Pdfr + chrX_8_2575001 chrX_2575001 RAL-508 2460 chrX 2635356 2635375 chrX 2635481 2635504 7 127 2.5 4.0 3.2 1.7 148 chrX 2635356 intron sgg + chrX 2635430 intron sgg + chrX 2635504 intron sgg + chrX_7_2635001 chrX_2635001 RAL-508 2461 chrX 2803474 2803522 chrX 2803637 2803685 11 160 3.5 0.0 1.8 3.9 211 chrX 2803474 intron kirre + chrX 2803580 intron kirre + chrX 2803685 intron kirre + chrX_11_2800001 chrX_2800001 RAL-508 2462 chrX 2844882 2844932 chrX 2852311 2852361 mdg1 7 7428 2.5 1.5 2.0 2.3 7479 chrX 2844882 intron kirre + chrX 2848622 intron kirre + chrX 2852361 intron kirre + chrX_7_2845001 chrX_2845001 RAL-508 2463 chrX 2888114 2888132 chrX 2888191 2888219 5 91 5.0 3.0 4.0 1.0 105 chrX 2888114 intron kirre + chrX 2888166 intron kirre + chrX 2888219 intron kirre + chrX_5_2885001 chrX_2885001 RAL-508 2464 chrX 3075625 3075665 chrX 3080951 3080991 Transpac 6 5326 6.0 8.0 7.0 0.8 5366 chrX 3075625 intron kirre + chrX 3078308 intron kirre + chrX 3080991 intron kirre + chrX_6_3075001 chrX_3075001 RAL-508 2465 chrX 3243616 3243637 chrX 3243726 3243746 6 110 4.0 2.0 3.0 1.5 130 chrX 3243616 intron dnc + chrX 3243681 intron dnc + chrX 3243746 intron dnc + chrX_6_3240001 chrX_3240001 RAL-508 2466 chrX 3306323 3306329 chrX 3306425 3306429 4 102 7.0 1.5 4.2 0.8 106 chrX 3306323 intron dnc + chrX 3306376 intron dnc + chrX 3306429 intron dnc + chrX_4_3305001 chrX_3305001 RAL-508 2467 chrX 3309645 3309665 chrX 3311906 3311950 13 2264 26.0 24.5 25.2 0.5 2305 chrX 3309645 intron dnc + chrX 3310798 intron dnc + chrX 3311950 intron dnc + chrX_13_3310001 chrX_3310001 RAL-508 2468 chrX 3322638 3322647 chrX 3322734 3322737 4 94 2.0 6.0 4.0 0.8 99 chrX 3322638 intron,intron dnc +,CR44886 - chrX 3322688 intron,intron dnc +,CR44886 - chrX 3322737 intron,intron dnc +,CR44886 - chrX_4_3320001 chrX_3320001 RAL-508 2469 chrX 3322656 3322659 chrX 3322731 3322755 4 89 1.5 4.5 3.0 1.0 99 chrX 3322656 intron,intron dnc +,CR44886 - chrX 3322706 intron,intron dnc +,CR44886 - chrX 3322755 intron,intron dnc +,CR44886 - chrX_4_3320001 chrX_3320001 RAL-508 2470 chrX 3415022 3415048 chrX 3421226 3421253 3S18 4 6204 3.5 8.5 6.0 0.6 6231 chrX 3415022 intron,intron CR44999 +,CG12535 - chrX 3418138 intron,intron CR44999 +,CG12535 - chrX 3421253 intron,intron CR44999 +,CG12535 - chrX_4_3415001 chrX_3415001 RAL-508 2471 chrX 3493075 3493115 chrX 3502254 3502274 roo 8 9172 2.5 1.0 1.8 2.9 9199 chrX 3493075 intron,intron CR44999 +,Gas8 - chrX 3497674 intron,intron CR44999 +,Gas8 - chrX 3502274 intron,intron CR44999 +,Gas8 - chrX_8_3495001 chrX_3495001 RAL-508 2472 chrX 3513747 3513790 chrX 3513850 3513893 12 102 4.5 3.5 4.0 2.4 146 chrX 3513747 intron,intron CR44999 +,CG32791 - chrX 3513820 intron,intron CR44999 +,CG32791 - chrX 3513893 intron,intron CR44999 +,CG32791 - chrX_12_3510001 chrX_3510001 RAL-508 2473 chrX 3595026 3595040 chrX 3595124 3595133 4 96 1.5 10.5 6.0 0.6 107 chrX 3595026 intron AstA-R1 + chrX 3595080 intron AstA-R1 + chrX 3595133 intron AstA-R1 + chrX_4_3595001 chrX_3595001 RAL-508 2474 chrX 3597095 3597129 chrX 3597203 3597236 6 107 1.0 4.0 2.5 1.7 141 chrX 3597095 intron AstA-R1 + chrX 3597166 intron AstA-R1 + chrX 3597236 intron AstA-R1 + chrX_6_3595001 chrX_3595001 RAL-508 2475 chrX 3597534 3597580 chrX 3619722 3619768 roo 21 22185 2.5 3.5 3.0 5.2 22234 chrX 3597534 intron AstA-R1 + chrX 3608651 intron AstA-R1 + chrX 3619768 intron AstA-R1 + chrX_21_3605001 chrX_3605001 RAL-508 2476 chrX 3662467 3662490 chrX 3662569 3662590 8 100 9.5 0.0 4.8 1.4 123 chrX 3662467 intron AstA-R1 + chrX 3662528 intron AstA-R1 + chrX 3662590 intron AstA-R1 + chrX_8_3660001 chrX_3660001 RAL-508 2477 chrX 3713114 3713134 chrX 3713243 3713263 8 128 3.0 3.0 3.0 2.0 149 chrX 3713114 intron Rala - chrX 3713188 intron Rala - chrX 3713263 intron Rala - chrX_8_3710001 chrX_3710001 RAL-508 2478 chrX 3842334 3842353 chrX 3842572 3842591 pogo 4 238 4.5 3.5 4.0 0.8 257 chrX 3842334 intron ec + chrX 3842462 intron ec + chrX 3842591 intron ec + chrX_4_3840001 chrX_3840001 RAL-508 2479 chrX 3881252 3881300 chrX 3881411 3881459 12 158 4.0 5.0 4.5 2.2 207 chrX 3881252 intron VhaAC39-1 + chrX 3881356 intron VhaAC39-1 + chrX 3881459 exon VhaAC39-1 + chrX_12_3880001 chrX_3880001 RAL-508 2480 chrX 3916132 3916155 chrX 3916207 3916259 5 92 3.0 4.0 3.5 1.1 127 chrX 3916132 intron CG42541 - chrX 3916196 intron CG42541 - chrX 3916259 intron CG42541 - chrX_5_3915001 chrX_3915001 RAL-508 2481 chrX 3986844 3986886 chrX 3994494 3994539 412 11 7649 5.5 6.0 5.8 1.6 7695 chrX 3986844 intergenic not near genes chrX 3990692 intergenic not near genes chrX 3994539 intergenic not near genes chrX_11_3990001 chrX_3990001 RAL-508 2482 chrX 4027990 4028024 chrX 4028477 4028515 9 483 3.0 4.5 3.8 1.9 525 chrX 4027990 intergenic not near genes chrX 4028252 intergenic not near genes chrX 4028515 intergenic not near genes chrX_9_4025001 chrX_4025001 RAL-508 2483 chrX 4029519 4029560 chrX 4029719 4029770 6 208 3.0 2.5 2.8 1.6 251 chrX 4029519 intergenic not near genes chrX 4029644 intergenic not near genes chrX 4029770 intergenic not near genes chrX_6_4025001 chrX_4025001 RAL-508 2484 chrX 4047464 4047505 chrX 4047597 4047618 9 130 3.0 4.0 3.5 2.0 154 chrX 4047464 intergenic CR45482 - chrX 4047541 intergenic CR45482 - chrX 4047618 3` UTR CR45482 - chrX_9_4045001 chrX_4045001 RAL-508 2485 chrX 4048480 4048523 chrX 4048576 4048619 16 96 3.0 2.5 2.8 4.2 139 chrX 4048480 3` UTR CR45482 - chrX 4048550 3` UTR CR45482 - chrX 4048619 3` UTR CR45482 - chrX_16_4045001 chrX_4045001 RAL-508 2486 chrX 4055643 4055660 chrX 4055740 4055746 7 97 7.5 9.5 8.5 0.7 103 chrX 4055643 intergenic not near genes chrX 4055694 intergenic not near genes chrX 4055746 intergenic not near genes chrX_7_4055001 chrX_4055001 RAL-508 2487 chrX 4101849 4101899 chrX 4101948 4101993 13 96 1.0 4.0 2.5 3.7 144 chrX 4101849 exon CG15375 + chrX 4101921 exon CG15375 + chrX 4101993 exon CG15375 + chrX_13_4100001 chrX_4100001 RAL-508 2488 chrX 4132661 4132696 chrX 4132850 4132885 5 189 3.0 4.0 3.5 1.1 224 chrX 4132661 3` UTR GlcAT-I + chrX 4132773 3` UTR GlcAT-I + chrX 4132885 intergenic Fas2 -,GlcAT-I + chrX_5_4130001 chrX_4130001 RAL-508 2489 chrX 4145038 4145060 chrX 4145181 4145201 7 142 4.0 3.0 3.5 1.6 163 chrX 4145038 intron Fas2 - chrX 4145120 intron Fas2 - chrX 4145201 intron Fas2 - chrX_7_4145001 chrX_4145001 RAL-508 2490 chrX 4157881 4157914 chrX 4164953 4164986 297 6 7073 1.0 2.0 1.5 2.4 7105 chrX 4157881 intron Fas2 - chrX 4161434 intron Fas2 - chrX 4164986 intron Fas2 - chrX_6_4160001 chrX_4160001 RAL-508 2491 chrX 4276460 4276505 chrX 4276557 4276596 14 98 2.5 3.0 2.8 3.7 136 chrX 4276460 intergenic CG15577 -,CR45483 - chrX 4276528 3` UTR CG15577 - chrX 4276596 3` UTR CG15577 - chrX_14_4275001 chrX_4275001 RAL-508 2492 chrX 4324372 4324398 chrX 4324469 4324477 5 92 2.0 1.0 1.5 2.0 105 chrX 4324372 intron norpA + chrX 4324424 intron norpA + chrX 4324477 intron norpA + chrX_5_4320001 chrX_4320001 RAL-508 2493 chrX 4396957 4397005 chrX 4397060 4397110 12 102 1.5 3.0 2.2 3.8 153 chrX 4396957 intron CR32773 - chrX 4397034 intron CR32773 - chrX 4397110 intron CR32773 - chrX_12_4395001 chrX_4395001 RAL-508 2494 chrX 4477919 4477933 chrX 4477993 4478021 7 87 7.5 5.5 6.5 0.9 102 chrX 4477919 intron,intron CR32773 -,bi + chrX 4477970 intron,intron CR32773 -,bi + chrX 4478021 intron,intron CR32773 -,bi + chrX_7_4475001 chrX_4475001 RAL-508 2495 chrX 4700395 4700425 chrX 4700740 4700785 jockey 9 358 2.5 3.5 3.0 2.2 390 chrX 4700395 3` UTR ctp + chrX 4700590 3` UTR ctp + chrX 4700785 3` UTR ctp + chrX_9_4700001 chrX_4700001 RAL-508 2496 chrX 4731796 4731827 chrX 4736909 4736910 jockey 5 5107 4.5 0.5 2.5 1.4 5114 chrX 4731796 intergenic not near genes chrX 4734353 intergenic not near genes chrX 4736910 intergenic not near genes chrX_5_4730001 chrX_4730001 RAL-508 2497 chrX 4744138 4744169 chrX 4744256 4744287 5 117 2.5 1.5 2.0 1.7 149 chrX 4744138 intergenic not near genes chrX 4744212 intergenic not near genes chrX 4744287 intergenic not near genes chrX_5_4740001 chrX_4740001 RAL-508 2498 chrX 4757371 4757410 chrX 4757470 4757509 5 98 0.0 2.0 1.0 2.5 138 chrX 4757371 intergenic not near genes chrX 4757440 intergenic not near genes chrX 4757509 intergenic not near genes chrX_5_4755001 chrX_4755001 RAL-508 2499 chrX 4763243 4763284 chrX 4763745 4763789 Stalker4 4 504 2.0 0.5 1.2 1.8 546 chrX 4763243 intergenic not near genes chrX 4763516 intergenic not near genes chrX 4763789 intergenic not near genes chrX_4_4760001 chrX_4760001 RAL-508 2500 chrX 4787068 4787076 chrX 4787186 4787194 4 117 5.0 5.5 5.2 0.6 126 chrX 4787068 intergenic not near genes chrX 4787131 intergenic not near genes chrX 4787194 intergenic not near genes chrX_4_4785001 chrX_4785001 RAL-508 2501 chrX 4787084 4787091 chrX 4787185 4787209 4 113 3.5 5.0 4.2 0.8 125 chrX 4787084 intergenic not near genes chrX 4787146 intergenic not near genes chrX 4787209 intergenic not near genes chrX_4_4785001 chrX_4785001 RAL-508 2502 chrX 4792366 4792386 chrX 4792818 4792833 jockey 7 450 2.5 4.0 3.2 1.7 467 chrX 4792366 intergenic not near genes chrX 4792600 intergenic not near genes chrX 4792833 intergenic not near genes chrX_7_4790001 chrX_4790001 RAL-508 2503 chrX 4827207 4827244 chrX 4827313 4827348 13 106 2.0 4.5 3.2 3.1 141 chrX 4827207 intergenic CG12682 + chrX 4827278 intergenic CG12682 + chrX 4827348 intergenic not near genes chrX_13_4825001 chrX_4825001 RAL-508 2504 chrX 4827979 4827997 chrX 4835347 4835351 Stalker4 9 7376 5.0 4.5 4.8 1.6 7372 chrX 4827979 intergenic not near genes chrX 4831665 intergenic not near genes chrX 4835351 intergenic not near genes chrX_9_4830001 chrX_4830001 RAL-508 2505 chrX 4844496 4844525 chrX 4844625 4844655 5 130 0.0 0.0 0.0 5.0 159 chrX 4844496 intron CG42594 + chrX 4844576 intron CG42594 + chrX 4844655 intron CG42594 + chrX_5_4840001 chrX_4840001 RAL-508 2506 chrX 4931327 4931374 chrX 4931441 4931483 17 109 24.5 12.5 18.5 0.9 156 chrX 4931327 intron CG44774 - chrX 4931405 intron CG44774 - chrX 4931483 intron CG44774 - chrX_17_4930001 chrX_4930001 RAL-508 2507 chrX 4990028 4990074 chrX 4997257 4997308 roo 10 7233 2.0 2.5 2.2 3.1 7280 chrX 4990028 intron CR44833 - chrX 4993668 intron CR44833 - chrX 4997308 intron CR44833 - chrX_10_4990001 chrX_4990001 RAL-508 2508 chrX 5147839 5147886 chrX 5147964 5147973 4 116 2.0 1.0 1.5 1.6 134 chrX 5147839 intron,intron CG15465 +,rg + chrX 5147906 intron,intron CG15465 +,rg + chrX 5147973 intron,intron CG15465 +,rg + chrX_4_5145001 chrX_5145001 RAL-508 2509 chrX 5167303 5167338 chrX 5167506 5167540 7 203 1.0 2.0 1.5 2.8 237 chrX 5167303 intron,intron CG15465 +,rg + chrX 5167422 intron,intron CG15465 +,rg + chrX 5167540 intron,intron CG15465 +,rg + chrX_7_5165001 chrX_5165001 RAL-508 2510 chrX 5338692 5338729 chrX 5339964 5339991 jockey 9 1269 1.5 1.5 1.5 3.6 1299 chrX 5338692 intergenic not near genes chrX 5339342 intergenic not near genes chrX 5339991 intergenic SK + chrX_9_5335001 chrX_5335001 RAL-508 2511 chrX 5434580 5434622 chrX 5434872 5434914 4 286 2.0 3.0 2.5 1.1 334 chrX 5434580 intron CR44471 + chrX 5434747 intron CR44471 + chrX 5434914 intron CR44471 + chrX_4_5430001 chrX_5430001 RAL-508 2512 chrX 5473566 5473617 chrX 5473662 5473675 20 88 1.5 1.5 1.5 8.0 109 chrX 5473566 intron SPR + chrX 5473620 intron SPR + chrX 5473675 intron SPR + chrX_20_5470001 chrX_5470001 RAL-508 2513 chrX 5883793 5883841 chrX 5884054 5884102 pogo 10 257 1.5 4.5 3.0 2.5 309 chrX 5883793 intron CR45668 - chrX 5883948 intron CR45668 - chrX 5884102 intron CR45668 - chrX_10_5880001 chrX_5880001 RAL-508 2514 chrX 5884143 5884191 chrX 5884403 5884452 pogo 11 260 3.5 3.5 3.5 2.4 309 chrX 5884143 intron CR45668 - chrX 5884298 intron CR45668 - chrX 5884452 intron CR45668 - chrX_11_5880001 chrX_5880001 RAL-508 2515 chrX 6003285 6003309 chrX 6003364 6003410 5 96 0.5 3.0 1.8 1.8 125 chrX 6003285 intron CR44498 + chrX 6003348 intron CR44498 + chrX 6003410 intron CR44498 + chrX_5_6000001 chrX_6000001 RAL-508 2516 chrX 6168079 6168121 chrX 6168184 6168210 10 96 5.0 4.0 4.5 1.8 131 chrX 6168079 intron Ca-alpha1T - chrX 6168144 intron Ca-alpha1T - chrX 6168210 intron Ca-alpha1T - chrX_10_6165001 chrX_6165001 RAL-508 2517 chrX 6171570 6171613 chrX 6179023 6179059 Quasimodo 10 7452 2.5 1.5 2.0 3.3 7489 chrX 6171570 intron Ca-alpha1T - chrX 6175314 intron Ca-alpha1T - chrX 6179059 intron Ca-alpha1T - chrX_10_6175001 chrX_6175001 RAL-508 2518 chrX 6215509 6215520 chrX 6215609 6215614 4 96 5.5 7.0 6.2 0.6 105 chrX 6215509 intergenic not near genes chrX 6215562 intergenic not near genes chrX 6215614 intergenic not near genes chrX_4_6215001 chrX_6215001 RAL-508 2519 chrX 6263818 6263851 chrX 6263919 6263949 7 100 5.5 3.5 4.5 1.3 131 chrX 6263818 intron schlank - chrX 6263884 intron schlank - chrX 6263949 intron schlank - chrX_7_6260001 chrX_6260001 RAL-508 2520 chrX 6315174 6315210 chrX 6315272 6315306 8 98 2.0 4.5 3.2 1.9 132 chrX 6315174 intron CG15894 + chrX 6315240 intron CG15894 + chrX 6315306 intron CG15894 + chrX_8_6315001 chrX_6315001 RAL-508 2521 chrX 6335212 6335244 chrX 6337719 6337774 Tirant 9 2527 0.0 3.5 1.8 3.2 2562 chrX 6335212 intergenic not near genes chrX 6336493 intergenic not near genes chrX 6337774 5` UTR CG3842 + chrX_9_6335001 chrX_6335001 RAL-508 2522 chrX 6388650 6388688 chrX 6388746 6388784 5 96 3.0 4.0 3.5 1.1 134 chrX 6388650 intergenic not near genes chrX 6388717 intergenic not near genes chrX 6388784 intergenic not near genes chrX_5_6385001 chrX_6385001 RAL-508 2523 chrX 6392856 6392884 chrX 6397636 6397669 Doc 7 4783 7.0 1.0 4.0 1.4 4813 chrX 6392856 intergenic not near genes chrX 6395262 intergenic not near genes chrX 6397669 intergenic not near genes chrX_7_6395001 chrX_6395001 RAL-508 2524 chrX 6445323 6445330 chrX 6451101 6451108 297 4 5778 2.0 3.0 2.5 1.1 5785 chrX 6445323 intron CG42340 - chrX 6448216 intron CG42340 - chrX 6451108 intron CG42340 - chrX_4_6445001 chrX_6445001 RAL-508 2525 chrX 6539901 6539931 chrX 6540022 6540050 9 121 2.5 7.0 4.8 1.6 149 chrX 6539901 intergenic not near genes chrX 6539976 intergenic not near genes chrX 6540050 intergenic not near genes chrX_9_6535001 chrX_6535001 RAL-508 2526 chrX 6562807 6562820 chrX 6571309 6571319 Tirant 4 8501 9.5 6.0 7.8 0.5 8512 chrX 6562807 intron CG34417 + chrX 6567063 intron CG34417 + chrX 6571319 intron CG34417 + chrX_4_6565001 chrX_6565001 RAL-508 2527 chrX 6562822 6562850 chrX 6571305 6571335 Tirant 7 8493 4.5 6.0 5.2 1.1 8513 chrX 6562822 intron CG34417 + chrX 6567078 intron CG34417 + chrX 6571335 intron CG34417 + chrX_7_6565001 chrX_6565001 RAL-508 2528 chrX 6581571 6581580 chrX 6581638 6581657 7 91 2.5 2.5 2.5 2.0 86 chrX 6581571 intron CG34417 + chrX 6581614 intron CG34417 + chrX 6581657 intron CG34417 + chrX_7_6580001 chrX_6580001 RAL-508 2529 chrX 6591839 6591853 chrX 6591944 6591958 6 104 6.0 0.5 3.2 1.4 119 chrX 6591839 intron Pat1 + chrX 6591898 intron Pat1 + chrX 6591958 intron Pat1 + chrX_6_6590001 chrX_6590001 RAL-508 2530 chrX 6737503 6737551 chrX 6737604 6737653 12 93 2.5 4.5 3.5 2.7 150 chrX 6737503 intron CG3168 - chrX 6737578 intron CG3168 - chrX 6737653 intron CG3168 - chrX_12_6735001 chrX_6735001 RAL-508 2531 chrX 6792075 6792085 chrX 6792186 6792188 6 109 3.5 4.0 3.8 1.2 113 chrX 6792075 intron C3G - chrX 6792132 intron C3G - chrX 6792188 intron C3G - chrX_6_6790001 chrX_6790001 RAL-508 2532 chrX 6814277 6814300 chrX 6814364 6814388 5 92 1.5 2.5 2.0 1.7 111 chrX 6814277 intron iav + chrX 6814332 intron iav + chrX 6814388 intron iav + chrX_5_6810001 chrX_6810001 RAL-508 2533 chrX 6897563 6897709 chrX 6897661 6897836 12 115 1.0 2.0 1.5 4.8 273 chrX 6897563 intergenic not near genes chrX 6897700 intergenic not near genes chrX 6897836 intergenic not near genes chrX_12_6895001 chrX_6895001 RAL-508 2534 chrX 6901366 6901385 chrX 6901462 6901467 4 92 1.5 5.0 3.2 1.0 101 chrX 6901366 intergenic not near genes chrX 6901416 intergenic not near genes chrX 6901467 intergenic not near genes chrX_4_6900001 chrX_6900001 RAL-508 2535 chrX 6950405 6950427 chrX 6950499 6950522 4 90 1.5 9.0 5.2 0.6 117 chrX 6950405 intron CG14431 + chrX 6950464 intron CG14431 + chrX 6950522 intron CG14431 + chrX_4_6950001 chrX_6950001 RAL-508 2536 chrX 6989482 6989528 chrX 6989588 6989628 7 105 3.0 1.0 2.0 2.3 146 chrX 6989482 intron ogre - chrX 6989555 intron ogre - chrX 6989628 intron ogre - chrX_7_6985001 chrX_6985001 RAL-508 2537 chrX 7023587 7023634 chrX 7030996 7031044 Tabor 8 7406 4.5 3.5 4.0 1.6 7457 chrX 7023587 intron CG12541 - chrX 7027316 intron CG12541 - chrX 7031044 intron CG12541 - chrX_8_7025001 chrX_7025001 RAL-508 2538 chrX 7125230 7125264 chrX 7134406 7134443 roo 11 9178 2.0 1.5 1.8 3.9 9213 chrX 7125230 intergenic not near genes chrX 7129836 intergenic not near genes chrX 7134443 intergenic not near genes chrX_11_7125001 chrX_7125001 RAL-508 2539 chrX 7606697 7606722 chrX 7606798 7606823 6 101 0.0 2.0 1.0 3.0 126 chrX 7606697 intergenic not near genes chrX 7606760 intergenic not near genes chrX 7606823 intergenic not near genes chrX_6_7605001 chrX_7605001 RAL-508 2540 chrX 7702514 7702520 chrX 7702606 7702629 4 104 0.0 4.0 2.0 1.3 115 chrX 7702514 intron CHES-1-like - chrX 7702572 intron CHES-1-like - chrX 7702629 intron CHES-1-like - chrX_4_7700001 chrX_7700001 RAL-508 2541 chrX 7702896 7702919 chrX 7703344 7703378 jockey 9 456 11.0 2.0 6.5 1.2 482 chrX 7702896 intron CHES-1-like - chrX 7703137 intron CHES-1-like - chrX 7703378 intron CHES-1-like - chrX_9_7700001 chrX_7700001 RAL-508 2542 chrX 7810662 7810694 chrX 7810792 7810795 6 120 3.0 4.5 3.8 1.2 133 chrX 7810662 intergenic not near genes chrX 7810728 intergenic not near genes chrX 7810795 intergenic not near genes chrX_6_7810001 chrX_7810001 RAL-508 2543 chrX 8092278 8092293 chrX 8092383 8092397 7 104 3.5 2.5 3.0 1.8 119 chrX 8092278 intron Ubc-E2H - chrX 8092338 intron Ubc-E2H - chrX 8092397 intron Ubc-E2H - chrX_7_8090001 chrX_8090001 RAL-508 2544 chrX 8092295 8092319 chrX 8092381 8092424 6 102 2.0 2.0 2.0 2.0 129 chrX 8092295 intron Ubc-E2H - chrX 8092360 intron Ubc-E2H - chrX 8092424 intron Ubc-E2H - chrX_6_8090001 chrX_8090001 RAL-508 2545 chrX 8214390 8214433 chrX 8214501 8214545 8 112 3.5 3.5 3.5 1.8 155 chrX 8214390 intron sdt + chrX 8214468 intron sdt + chrX 8214545 intron sdt + chrX_8_8210001 chrX_8210001 RAL-508 2546 chrX 8371168 8371174 chrX 8371318 8371348 4 158 0.5 0.0 0.2 3.3 180 chrX 8371168 intergenic not near genes chrX 8371258 intergenic not near genes chrX 8371348 intergenic not near genes chrX_4_8370001 chrX_8370001 RAL-508 2547 chrX 8500919 8500946 chrX 8501103 8501130 4 184 3.5 0.0 1.8 1.4 211 chrX 8500919 intron CG33181 + chrX 8501024 intron CG33181 + chrX 8501130 intron CG33181 + chrX_4_8500001 chrX_8500001 RAL-508 2548 chrX 8536744 8536777 chrX 8536840 8536870 17 94 11.0 6.0 8.5 1.8 126 chrX 8536744 intron Nrg + chrX 8536807 intron Nrg + chrX 8536870 intron Nrg + chrX_17_8535001 chrX_8535001 RAL-508 2549 chrX 8834947 8834964 chrX 8835062 8835082 4 118 0.0 4.5 2.2 1.2 135 chrX 8834947 intergenic CR45537 + chrX 8835014 intergenic CR45537 + chrX 8835082 intergenic CR45537 + chrX_4_8835001 chrX_8835001 RAL-508 2550 chrX 8885647 8885697 chrX 8885767 8885817 12 120 2.5 4.5 3.5 2.7 170 chrX 8885647 intron Moe - chrX 8885732 intron Moe - chrX 8885817 intron Moe - chrX_12_8885001 chrX_8885001 RAL-508 2551 chrX 8922329 8922363 chrX 8922760 8922761 jockey 16 446 1.5 1.5 1.5 6.4 432 chrX 8922329 intron rdgA + chrX 8922545 intron rdgA + chrX 8922761 intron rdgA + chrX_16_8920001 chrX_8920001 RAL-508 2552 chrX 8948743 8948785 chrX 8956272 8956314 roo 12 7530 1.5 1.5 1.5 4.8 7571 chrX 8948743 intron rdgA + chrX 8952528 intron rdgA + chrX 8956314 intron rdgA + chrX_12_8950001 chrX_8950001 RAL-508 2553 chrX 8968848 8968856 chrX 8968945 8968952 4 96 7.5 5.5 6.5 0.5 104 chrX 8968848 intron rdgA + chrX 8968900 intron rdgA + chrX 8968952 intron rdgA + chrX_4_8965001 chrX_8965001 RAL-508 2554 chrX 9062714 9062751 chrX 9062812 9062849 7 98 1.5 0.0 0.8 3.9 135 chrX 9062714 intron CG15365 - chrX 9062782 intron CG15365 - chrX 9062849 intron CG15365 - chrX_7_9060001 chrX_9060001 RAL-508 2555 chrX 9337937 9337972 chrX 9338049 9338052 8 106 2.0 6.5 4.2 1.5 115 chrX 9337937 intron CG34449 - chrX 9337994 intron CG34449 - chrX 9338052 exon CG34449 - chrX_8_9335001 chrX_9335001 RAL-508 2556 chrX 9383995 9384018 chrX 9384062 9384091 6 77 1.5 1.0 1.2 2.7 96 chrX 9383995 intron mgl - chrX 9384043 intron mgl - chrX 9384091 intron mgl - chrX_6_9380001 chrX_9380001 RAL-508 2557 chrX 9508123 9508157 chrX 9509661 9509695 jockey 7 1538 3.5 3.0 3.2 1.7 1572 chrX 9508123 intron CG32700 - chrX 9508909 intron CG32700 - chrX 9509695 intron CG32700 - chrX_7_9505001 chrX_9505001 RAL-508 2558 chrX 9537090 9537137 chrX 9537362 9537381 20 271 5.0 5.0 5.0 3.3 291 chrX 9537090 intron CG32700 - chrX 9537236 intron CG32700 - chrX 9537381 intron CG32700 - chrX_20_9535001 chrX_9535001 RAL-508 2559 chrX 9575813 9575824 chrX 9576118 9576165 mdg3 4 333 2.0 8.5 5.2 0.6 352 chrX 9575813 intron,exon CG32699 -,CG42395 - chrX 9575989 intron,intron CG32699 -,CG42395 - chrX 9576165 intron,5` UTR CG32699 -,CG42395 - chrX_4_9575001 chrX_9575001 RAL-508 2560 chrX 9599162 9599201 chrX 9599255 9599277 12 89 3.5 7.0 5.2 1.9 115 chrX 9599162 intergenic not near genes chrX 9599220 intergenic not near genes chrX 9599277 intergenic not near genes chrX_12_9595001 chrX_9595001 RAL-508 2561 chrX 9656878 9656927 chrX 9656993 9657034 9 113 4.5 3.5 4.0 1.8 156 chrX 9656878 intron l(1)G0232 - chrX 9656956 intron l(1)G0232 - chrX 9657034 intron l(1)G0232 - chrX_9_9655001 chrX_9655001 RAL-508 2562 chrX 9663947 9663964 chrX 9664236 9664273 7 305 4.5 4.0 4.2 1.3 326 chrX 9663947 intergenic not near genes chrX 9664110 intergenic not near genes chrX 9664273 intergenic not near genes chrX_7_9660001 chrX_9660001 RAL-508 2563 chrX 9758032 9758067 chrX 9758136 9758172 4 105 1.5 0.0 0.8 2.2 140 chrX 9758032 intergenic not near genes chrX 9758102 intergenic not near genes chrX 9758172 intergenic not near genes chrX_4_9755001 chrX_9755001 RAL-508 2564 chrX 9839319 9839370 chrX 9839422 9839472 6 102 0.0 3.5 1.8 2.1 153 chrX 9839319 intron CG32698 + chrX 9839396 intron CG32698 + chrX 9839472 intron CG32698 + chrX_6_9835001 chrX_9835001 RAL-508 2565 chrX 7995775 7995775 chrX 9845361 9845361 8 1849586 8.0 18.0 13.0 0.6 1849586 chrX 7995775 5` UTR Tbh + chrX 8920568 intron rdgA + chrX 9845361 intron CG32698 + chrX_8_8920001 chrX_8920001 RAL-508 2566 chrX 9925510 9925567 chrX 9925612 9925648 11 98 4.5 4.5 4.5 2.0 138 chrX 9925510 intergenic not near genes chrX 9925579 intergenic not near genes chrX 9925648 intergenic not near genes chrX_11_9925001 chrX_9925001 RAL-508 2567 chrX 10138204 10138245 chrX 10145720 10145769 412 9 7521 3.5 2.0 2.8 2.4 7565 chrX 10138204 intron,intron RhoU +,CR44894 - chrX 10141986 intron,intron RhoU +,CR44894 - chrX 10145769 intron,intron RhoU +,CR44894 - chrX_9_10140001 chrX_10140001 RAL-508 2568 chrX 10151906 10151933 chrX 10152003 10152003 10 93 5.0 6.5 5.8 1.5 97 chrX 10151906 intron CR44894 - chrX 10151954 intron CR44894 - chrX 10152003 intron CR44894 - chrX_10_10150001 chrX_10150001 RAL-508 2569 chrX 10348782 10348817 chrX 10356367 10356399 springer 6 7582 3.0 4.0 3.5 1.3 7617 chrX 10348782 intergenic snoRNA:U3:9B + chrX 10352590 intergenic not near genes chrX 10356399 intergenic l(1)G0289 - chrX_6_10350001 chrX_10350001 RAL-508 2570 chrX 10369104 10369123 chrX 10369282 10369310 6 182 1.5 4.0 2.8 1.6 206 chrX 10369104 intron CG17841 + chrX 10369207 intron CG17841 + chrX 10369310 intron CG17841 + chrX_6_10365001 chrX_10365001 RAL-508 2571 chrX 10506484 10506524 chrX 10506591 10506605 7 93 2.5 3.0 2.8 1.8 121 chrX 10506484 intron spri - chrX 10506544 intron spri - chrX 10506605 intron spri - chrX_7_10505001 chrX_10505001 RAL-508 2572 chrX 10525048 10525069 chrX 10532137 10532158 297 5 7089 7.5 1.5 4.5 0.9 7110 chrX 10525048 intron spri - chrX 10528603 intron spri - chrX 10532158 intron spri - chrX_5_10525001 chrX_10525001 RAL-508 2573 chrX 10550318 10550364 chrX 10550416 10550462 13 97 3.0 3.0 3.0 3.2 144 chrX 10550318 intron spri - chrX 10550390 intron spri - chrX 10550462 intron spri - chrX_13_10550001 chrX_10550001 RAL-508 2574 chrX 10678675 10678710 chrX 10682010 10682053 8 3336 11.0 32.5 21.8 0.4 3378 chrX 10678675 intron X11Lbeta + chrX 10680364 intron X11Lbeta + chrX 10682053 intron X11Lbeta + chrX_8_10680001 chrX_10680001 RAL-508 2575 chrX 10686034 10686084 chrX 10691191 10691234 roo 10 5155 1.0 5.0 3.0 2.5 5200 chrX 10686034 intron X11Lbeta + chrX 10688634 intron X11Lbeta + chrX 10691234 intron X11Lbeta + chrX_10_10685001 chrX_10685001 RAL-508 2576 chrX 10719129 10719146 chrX 10719221 10719238 5 91 0.0 3.0 1.5 2.0 109 chrX 10719129 intron CG32676 - chrX 10719184 intron CG32676 - chrX 10719238 intron CG32676 - chrX_5_10715001 chrX_10715001 RAL-508 2577 chrX 10817584 10817631 chrX 10817689 10817736 9 102 2.5 0.5 1.5 3.6 152 chrX 10817584 intron Imp - chrX 10817660 intron Imp - chrX 10817736 intron Imp - chrX_9_10815001 chrX_10815001 RAL-508 2578 chrX 10876605 10876652 chrX 10876703 10876725 4 85 0.0 4.0 2.0 1.3 120 chrX 10876605 intron CG1637 - chrX 10876665 intron CG1637 - chrX 10876725 intron CG1637 - chrX_4_10875001 chrX_10875001 RAL-508 2579 chrX 11034268 11034320 chrX 11034618 11034670 9 347 0.0 1.5 0.8 5.0 402 chrX 11034268 intron CG42339 - chrX 11034469 intron CG42339 - chrX 11034670 intron CG42339 - chrX_9_11030001 chrX_11030001 RAL-508 2580 chrX 11095988 11096023 chrX 11103110 11103145 HMS-Beagle 4 7122 0.5 4.0 2.2 1.2 7157 chrX 11095988 intergenic not near genes chrX 11099566 intergenic not near genes chrX 11103145 intron CG42249 + chrX_4_11095001 chrX_11095001 RAL-508 2581 chrX 11109417 11109417 chrX 12946233 12946234 4 1836816 7.0 7.0 7.0 0.5 1836817 chrX 11109417 intron Hsp60 + chrX 12027826 exon Usp7 - chrX 12946234 3` UTR fne + chrX_4_12025001 chrX_12025001 RAL-508 2582 chrX 11165886 11165898 chrX 11166237 11166250 4 351 3.5 2.5 3.0 1.0 364 chrX 11165886 intergenic not near genes chrX 11166068 intergenic not near genes chrX 11166250 intergenic not near genes chrX_4_11165001 chrX_11165001 RAL-508 2583 chrX 11184235 11184272 chrX 11189331 11189368 flea 10 5095 2.5 2.5 2.5 2.9 5133 chrX 11184235 intergenic not near genes chrX 11186802 intergenic not near genes chrX 11189368 intergenic not near genes chrX_10_11185001 chrX_11185001 RAL-508 2584 chrX 11191892 11191924 chrX 11191980 11192022 8 96 3.0 2.5 2.8 2.1 130 chrX 11191892 intergenic not near genes chrX 11191957 intergenic not near genes chrX 11192022 intergenic not near genes chrX_8_11190001 chrX_11190001 RAL-508 2585 chrX 11254147 11254202 chrX 11254278 11254297 13 127 2.5 3.0 2.8 3.4 150 chrX 11254147 intron CG44422 - chrX 11254222 intron CG44422 - chrX 11254297 intron CG44422 - chrX_13_11250001 chrX_11250001 RAL-508 2586 chrX 11268542 11268595 chrX 11270053 11270105 hopper2 9 1503 3.0 2.5 2.8 2.4 1563 chrX 11268542 intron CG44422 - chrX 11269324 intron CG44422 - chrX 11270105 intron CG44422 - chrX_9_11265001 chrX_11265001 RAL-508 2587 chrX 11287164 11287171 chrX 11287270 11287277 4 106 3.5 0.5 2.0 1.3 113 chrX 11287164 intron CG44422 - chrX 11287220 intron CG44422 - chrX 11287277 intron CG44422 - chrX_4_11285001 chrX_11285001 RAL-508 2588 chrX 11312045 11312080 chrX 11319412 11319453 Stalker2 5 7367 2.5 3.0 2.8 1.3 7408 chrX 11312045 intergenic not near genes chrX 11315749 intergenic not near genes chrX 11319453 intergenic not near genes chrX_5_11315001 chrX_11315001 RAL-508 2589 chrX 11312081 11312088 chrX 11319411 11319461 Stalker2 4 7348 2.5 3.0 2.8 1.1 7380 chrX 11312081 intergenic not near genes chrX 11315771 intergenic not near genes chrX 11319461 intergenic not near genes chrX_4_11315001 chrX_11315001 RAL-508 2590 chrX 11409490 11409537 chrX 11409595 11409623 11 101 1.5 0.5 1.0 5.5 133 chrX 11409490 3` UTR dlg1 + chrX 11409556 3` UTR dlg1 + chrX 11409623 3` UTR dlg1 + chrX_11_11405001 chrX_11405001 RAL-508 2591 chrX 11535030 11535046 chrX 11541520 11541536 Burdock 4 6490 7.0 5.0 6.0 0.6 6506 chrX 11535030 intron Drak + chrX 11538283 intron Drak + chrX 11541536 intron Drak + chrX_4_11535001 chrX_11535001 RAL-508 2592 chrX 11554860 11554911 chrX 11555256 11555307 9 396 5.5 22.5 14.0 0.6 447 chrX 11554860 3` UTR Drak + chrX 11555084 3` UTR CG1572 - chrX 11555307 3` UTR CG1572 - chrX_9_11555001 chrX_11555001 RAL-508 2593 chrX 11633405 11633445 chrX 11640479 11640519 297 7 7070 1.5 5.5 3.5 1.6 7114 chrX 11633405 intron Ptp10D + chrX 11636962 intron Ptp10D + chrX 11640519 intron Ptp10D + chrX_7_11635001 chrX_11635001 RAL-508 2594 chrX 11645089 11645114 chrX 11648277 11648302 NOF 5 3188 2.5 1.5 2.0 1.7 3213 chrX 11645089 intron Ptp10D + chrX 11646696 intron Ptp10D + chrX 11648302 intron Ptp10D + chrX_5_11645001 chrX_11645001 RAL-508 2595 chrX 11651595 11651624 chrX 11651706 11651741 5 115 5.5 1.0 3.2 1.2 146 chrX 11651595 intron Ptp10D + chrX 11651668 intron Ptp10D + chrX 11651741 intron Ptp10D + chrX_5_11650001 chrX_11650001 RAL-508 2596 chrX 11684869 11684895 chrX 11685013 11685041 5 141 8.5 0.0 4.2 1.0 172 chrX 11684869 intron bif + chrX 11684955 intron bif + chrX 11685041 intron bif + chrX_5_11680001 chrX_11680001 RAL-508 2597 chrX 11799001 11799033 chrX 11799107 11799138 5 106 4.0 2.0 3.0 1.2 137 chrX 11799001 intron CkIIbeta + chrX 11799070 intron CkIIbeta + chrX 11799138 intron CkIIbeta + chrX_5_11795001 chrX_11795001 RAL-508 2598 chrX 11922346 11922379 chrX 11922499 11922532 12 152 2.5 1.5 2.0 4.0 186 chrX 11922346 exon Sclp - chrX 11922439 intron Sclp - chrX 11922532 intron Sclp - chrX_12_11920001 chrX_11920001 RAL-508 2599 chrX 12029368 12029415 chrX 12029468 12029515 5 99 1.5 0.5 1.0 2.5 147 chrX 12029368 intergenic Usp7 -,Cyp311a1 - chrX 12029442 intergenic Cyp311a1 -,Usp7 - chrX 12029515 intergenic Cyp311a1 -,Usp7 - chrX_5_12025001 chrX_12025001 RAL-508 2600 chrX 12168122 12168151 chrX 12173584 12173613 I-element 8 5461 1.5 1.0 1.2 3.6 5491 chrX 12168122 intron Ten-a + chrX 12170868 intron Ten-a + chrX 12173613 intron Ten-a + chrX_8_12170001 chrX_12170001 RAL-508 2601 chrX 12270354 12270380 chrX 12270483 12270516 12 135 0.5 4.0 2.2 3.8 162 chrX 12270354 intron Ten-a + chrX 12270435 intron Ten-a + chrX 12270516 intron Ten-a + chrX_12_12270001 chrX_12270001 RAL-508 2602 chrX 12272841 12272867 chrX 12272923 12272966 6 92 2.0 2.0 2.0 2.0 125 chrX 12272841 intron Ten-a + chrX 12272904 intron Ten-a + chrX 12272966 intron Ten-a + chrX_6_12270001 chrX_12270001 RAL-508 2603 chrX 12277181 12277205 chrX 12277273 12277316 5 106 2.5 3.5 3.0 1.2 135 chrX 12277181 intron Ten-a + chrX 12277248 intron Ten-a + chrX 12277316 intron Ten-a + chrX_5_12275001 chrX_12275001 RAL-508 2604 chrX 12301952 12301973 chrX 12303261 12303270 X-element 10 1313 3.0 0.5 1.8 3.6 1318 chrX 12301952 intron Ten-a + chrX 12302611 intron Ten-a + chrX 12303270 intron Ten-a + chrX_10_12300001 chrX_12300001 RAL-508 2605 chrX 12303804 12303840 chrX 12303926 12303962 9 120 3.0 1.0 2.0 3.0 158 chrX 12303804 intron Ten-a + chrX 12303883 intron Ten-a + chrX 12303962 intron Ten-a + chrX_9_12300001 chrX_12300001 RAL-508 2606 chrX 12423618 12423662 chrX 12423722 12423767 11 101 1.5 1.0 1.2 5.0 149 chrX 12423618 intergenic not near genes chrX 12423692 intergenic not near genes chrX 12423767 intergenic not near genes chrX_11_12420001 chrX_12420001 RAL-508 2607 chrX 12533772 12533814 chrX 12533869 12533910 6 97 0.0 1.0 0.5 4.0 138 chrX 12533772 intron CG43921 - chrX 12533841 intron CG43921 - chrX 12533910 intron CG43921 - chrX_6_12530001 chrX_12530001 RAL-508 2608 chrX 12808471 12808476 chrX 12808570 12808586 5 107 3.0 3.0 3.0 1.2 115 chrX 12808471 intron Pde9 - chrX 12808528 intron Pde9 - chrX 12808586 intron Pde9 - chrX_5_12805001 chrX_12805001 RAL-508 2609 chrX 12930578 12930606 chrX 12937713 12937738 HMS-Beagle 6 7134 1.5 4.5 3.0 1.5 7160 chrX 12930578 intron fne + chrX 12934158 intron fne + chrX 12937738 intron fne + chrX_6_12930001 chrX_12930001 RAL-508 2610 chrX 12971691 12971708 chrX 12971767 12971772 5 73 3.5 8.0 5.8 0.7 81 chrX 12971691 intron,exon CR43636 -,CG15721 + chrX 12971732 intron,exon CR43636 -,CG15721 + chrX 12971772 intron,exon CR43636 -,CG15721 + chrX_5_12970001 chrX_12970001 RAL-508 2611 chrX 13146575 13146621 chrX 13146683 13146729 5 108 2.0 2.5 2.2 1.6 154 chrX 13146575 intron CG32645 + chrX 13146652 intron CG32645 + chrX 13146729 intron CG32645 + chrX_5_13145001 chrX_13145001 RAL-508 2612 chrX 13236886 13236894 chrX 13236961 13236999 4 97 0.5 2.0 1.2 1.8 113 chrX 13236886 intron mew - chrX 13236942 intron mew - chrX 13236999 intron mew - chrX_4_13235001 chrX_13235001 RAL-508 2613 chrX 13278162 13278173 chrX 13278262 13278274 7 101 9.0 7.5 8.2 0.8 112 chrX 13278162 intron HDAC4 - chrX 13278218 intron HDAC4 - chrX 13278274 intron HDAC4 - chrX_7_13275001 chrX_13275001 RAL-508 2614 chrX 13405157 13405177 chrX 13405241 13405272 5 91 1.5 6.0 3.8 1.0 115 chrX 13405157 intron GstT4 + chrX 13405214 intron GstT4 + chrX 13405272 intron GstT4 + chrX_5_13405001 chrX_13405001 RAL-508 2615 chrX 13429468 13429490 chrX 13430637 13430644 jockey 10 1167 5.0 9.0 7.0 1.2 1176 chrX 13429468 intergenic not near genes chrX 13430056 intergenic not near genes chrX 13430644 intergenic not near genes chrX_10_13430001 chrX_13430001 RAL-508 2616 chrX 13463643 13463675 chrX 13469237 13469272 mdg3 10 5596 4.5 2.5 3.5 2.2 5629 chrX 13463643 intron Neto + chrX 13466458 intron Neto + chrX 13469272 intron Neto + chrX_10_13465001 chrX_13465001 RAL-508 2617 chrX 13563404 13563426 chrX 13563504 13563526 8 100 4.5 0.5 2.5 2.3 122 chrX 13563404 intergenic CG32633 +,Tango13 + chrX 13563465 intergenic CG32633 +,Tango13 + chrX 13563526 intergenic CG32633 +,Tango13 + chrX_8_13560001 chrX_13560001 RAL-508 2618 chrX 13628425 13628465 chrX 13628529 13628565 5 103 3.0 1.5 2.2 1.6 140 chrX 13628425 intron NFAT + chrX 13628495 intron NFAT + chrX 13628565 intron NFAT + chrX_5_13625001 chrX_13625001 RAL-508 2619 chrX 13669505 13669547 chrX 13670291 13670333 15 787 18.5 32.0 25.2 0.6 828 chrX 13669505 3` UTR CG11164 + chrX 13669919 intron CG15760 + chrX 13670333 5` UTR CG15760 + chrX_15_13665001 chrX_13665001 RAL-508 2620 chrX 13706667 13706708 chrX 13706767 13706804 9 98 5.0 4.5 4.8 1.6 137 chrX 13706667 intron,intron CG9940 -,NnaD + chrX 13706736 intron,intron CG9940 -,NnaD + chrX 13706804 intron,intron CG9940 -,NnaD + chrX_9_13705001 chrX_13705001 RAL-508 2621 chrX 13791148 13791179 chrX 13791306 13791350 4 168 2.0 0.0 1.0 2.0 202 chrX 13791148 intron inaE + chrX 13791249 intron inaE + chrX 13791350 intron inaE + chrX_4_13790001 chrX_13790001 RAL-508 2622 chrX 13821457 13821470 chrX 13821548 13821567 4 92 4.5 5.5 5.0 0.7 110 chrX 13821457 intron Clic - chrX 13821512 intron Clic - chrX 13821567 intron Clic - chrX_4_13820001 chrX_13820001 RAL-508 2623 chrX 13934287 13934314 chrX 13934390 13934417 7 102 2.5 7.0 4.8 1.2 130 chrX 13934287 intron mamo - chrX 13934352 intron mamo - chrX 13934417 intron mamo - chrX_7_13930001 chrX_13930001 RAL-508 2624 chrX 13935498 13935525 chrX 13935598 13935628 7 101 2.5 8.0 5.2 1.1 130 chrX 13935498 intron mamo - chrX 13935563 intron mamo - chrX 13935628 intron mamo - chrX_7_13935001 chrX_13935001 RAL-508 2625 chrX 13937978 13938008 chrX 13941267 13941299 I-element 6 3291 0.5 0.5 0.5 4.0 3321 chrX 13937978 intron mamo - chrX 13939638 intron mamo - chrX 13941299 intron mamo - chrX_6_13935001 chrX_13935001 RAL-508 2626 chrX 13943278 13943301 chrX 13943367 13943410 6 105 0.5 5.0 2.8 1.6 132 chrX 13943278 intron mamo - chrX 13943344 intron mamo - chrX 13943410 intron mamo - chrX_6_13940001 chrX_13940001 RAL-508 2627 chrX 14064145 14064167 chrX 14064244 14064284 7 114 0.0 1.0 0.5 4.7 139 chrX 14064145 intergenic not near genes chrX 14064214 intergenic not near genes chrX 14064284 intergenic not near genes chrX_7_14060001 chrX_14060001 RAL-508 2628 chrX 14105030 14105032 chrX 14114201 14114201 roo 4 9170 8.5 6.0 7.2 0.5 9171 chrX 14105030 intergenic not near genes chrX 14109616 intergenic not near genes chrX 14114201 5` UTR CR44657 + chrX_4_14105001 chrX_14105001 RAL-508 2629 chrX 14167386 14167433 chrX 14167501 14167547 4 114 1.5 4.5 3.0 1.0 161 chrX 14167386 intergenic not near genes chrX 14167466 intergenic not near genes chrX 14167547 intergenic not near genes chrX_4_14165001 chrX_14165001 RAL-508 2630 chrX 14209443 14209490 chrX 14209554 14209600 9 111 3.0 2.0 2.5 2.6 157 chrX 14209443 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209522 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209600 intron,intron l(1)G0007 +,l(1)G0469 - chrX_9_14205001 chrX_14205001 RAL-508 2631 chrX 14312077 14312115 chrX 14312256 14312295 16 179 2.0 1.5 1.8 5.7 218 chrX 14312077 intergenic not near genes chrX 14312186 intergenic not near genes chrX 14312295 intergenic not near genes chrX_16_14310001 chrX_14310001 RAL-508 2632 chrX 14381393 14381409 chrX 14381567 14381583 5 174 1.5 2.0 1.8 1.8 190 chrX 14381393 intron,3` UTR dpr8 +,betaNACtes4 + chrX 14381488 intron dpr8 + chrX 14381583 intron dpr8 + chrX_5_14380001 chrX_14380001 RAL-508 2633 chrX 14416285 14416318 chrX 14421073 14421106 F-element 6 4788 2.5 1.5 2.0 2.0 4821 chrX 14416285 intron dpr8 + chrX 14418696 intron dpr8 + chrX 14421106 intron dpr8 + chrX_6_14415001 chrX_14415001 RAL-508 2634 chrX 14597734 14597752 chrX 14597818 14597849 4 93 6.5 5.0 5.8 0.6 115 chrX 14597734 intron CG9413 - chrX 14597792 intron CG9413 - chrX 14597849 intron CG9413 - chrX_4_14595001 chrX_14595001 RAL-508 2635 chrX 14628739 14628784 chrX 14628832 14628876 9 96 1.5 2.5 2.0 3.0 137 chrX 14628739 intron NetA - chrX 14628808 intron NetA - chrX 14628876 intron NetA - chrX_9_14625001 chrX_14625001 RAL-508 2636 chrX 14636448 14636486 chrX 14641908 14641943 I-element 12 5459 3.5 3.0 3.2 2.9 5495 chrX 14636448 intron NetA - chrX 14639196 intron NetA - chrX 14641943 intron NetA - chrX_12_14635001 chrX_14635001 RAL-508 2637 chrX 14774982 14775008 chrX 14775063 14775106 4 94 2.5 5.0 3.8 0.8 124 chrX 14774982 intergenic CG5334 + chrX 14775044 intergenic CG5334 + chrX 14775106 intergenic CG5334 + chrX_4_14775001 chrX_14775001 RAL-508 2638 chrX 14778023 14778054 chrX 14782838 14782871 Doc 7 4817 2.5 5.0 3.8 1.5 4848 chrX 14778023 intergenic CG5347 + chrX 14780447 intergenic not near genes chrX 14782871 intergenic Ag5r2 - chrX_7_14780001 chrX_14780001 RAL-508 2639 chrX 14818756 14818796 chrX 14823980 14824019 copia 6 5216 2.5 3.5 3.0 1.5 5263 chrX 14818756 intron rut - chrX 14821388 intron rut - chrX 14824019 intron rut - chrX_6_14820001 chrX_14820001 RAL-508 2640 chrX 14936843 14936871 chrX 14946120 14946148 roo 6 9277 3.5 3.0 3.2 1.4 9305 chrX 14936843 intron pdgy - chrX 14941496 intron pdgy - chrX 14946148 intron pdgy - chrX_6_14940001 chrX_14940001 RAL-508 2641 chrX 14968053 14968094 chrX 14968152 14968193 6 99 0.0 6.0 3.0 1.5 140 chrX 14968053 intron eag + chrX 14968123 intron eag + chrX 14968193 intron eag + chrX_6_14965001 chrX_14965001 RAL-508 2642 chrX 15049548 15049592 chrX 15049677 15049721 10 128 1.5 0.0 0.8 5.6 173 chrX 15049548 intron,intron hiw -,CG5541 + chrX 15049634 intron,intron hiw -,CG5541 + chrX 15049721 intron,intron hiw -,CG5541 + chrX_10_15045001 chrX_15045001 RAL-508 2643 chrX 15070163 15070312 chrX 15070276 15070428 7 115 0.0 0.0 0.0 7.0 265 chrX 15070163 3` UTR Lsd-2 - chrX 15070296 3` UTR Lsd-2 - chrX 15070428 3` UTR Lsd-2 - chrX_7_15070001 chrX_15070001 RAL-508 2644 chrX 15212250 15212282 chrX 15212372 15212403 5 117 3.5 1.5 2.5 1.4 153 chrX 15212250 intergenic not near genes chrX 15212326 intergenic not near genes chrX 15212403 intergenic not near genes chrX_5_15210001 chrX_15210001 RAL-508 2645 chrX 15248267 15248290 chrX 15248343 15248386 9 90 2.5 1.0 1.8 3.2 119 chrX 15248267 intergenic not near genes chrX 15248326 intergenic not near genes chrX 15248386 intergenic not near genes chrX_9_15245001 chrX_15245001 RAL-508 2646 chrX 15273689 15273737 chrX 15274876 15274892 1360 8 1176 3.0 2.0 2.5 2.3 1203 chrX 15273689 intergenic not near genes chrX 15274290 intergenic not near genes chrX 15274892 intergenic not near genes chrX_8_15270001 chrX_15270001 RAL-508 2647 chrX 15334356 15334384 chrX 15334471 15334496 5 114 3.0 7.0 5.0 0.8 140 chrX 15334356 intron HDAC6 + chrX 15334426 intron HDAC6 + chrX 15334496 intron,3` UTR HDAC6 +,CR44998 - chrX_5_15330001 chrX_15330001 RAL-508 2648 chrX 15358293 15358337 chrX 15358400 15358445 9 107 0.5 6.0 3.2 2.1 152 chrX 15358293 intron acj6 - chrX 15358369 intron acj6 - chrX 15358445 intron acj6 - chrX_9_15355001 chrX_15355001 RAL-508 2649 chrX 15369817 15369857 chrX 15369912 15369960 6 102 5.0 4.0 4.5 1.1 143 chrX 15369817 intron acj6 - chrX 15369888 intron acj6 - chrX 15369960 intron acj6 - chrX_6_15365001 chrX_15365001 RAL-508 2650 chrX 15413059 15413080 chrX 15417367 15417402 Juan 4 4316 5.5 7.0 6.2 0.6 4343 chrX 15413059 intron Cngl - chrX 15415230 intron Cngl - chrX 15417402 intron Cngl - chrX_4_15415001 chrX_15415001 RAL-508 2651 chrX 15426167 15426196 chrX 15426283 15426310 4 115 2.5 2.0 2.2 1.2 143 chrX 15426167 intron Cngl - chrX 15426238 intron Cngl - chrX 15426310 intron Cngl - chrX_4_15425001 chrX_15425001 RAL-508 2652 chrX 15429216 15429260 chrX 15429318 15429362 10 99 2.0 3.0 2.5 2.9 146 chrX 15429216 intron Cngl - chrX 15429289 intron Cngl - chrX 15429362 intron Cngl - chrX_10_15425001 chrX_15425001 RAL-508 2653 chrX 15671185 15671193 chrX 15671292 15671300 5 107 2.5 0.0 1.2 2.3 115 chrX 15671185 intergenic CG15646 - chrX 15671242 intergenic CG15646 - chrX 15671300 intergenic CG15646 - chrX_5_15670001 chrX_15670001 RAL-508 2654 chrX 15678018 15678068 chrX 15678113 15678165 13 92 1.5 2.0 1.8 4.6 147 chrX 15678018 intergenic CG12708 + chrX 15678092 intergenic CG12708 + chrX 15678165 intergenic CG12708 + chrX_13_15675001 chrX_15675001 RAL-508 2655 chrX 15749646 15749673 chrX 15749768 15749796 10 123 2.0 4.0 3.0 2.5 150 chrX 15749646 intron CG8239 + chrX 15749721 intron CG8239 + chrX 15749796 intron CG8239 + chrX_10_15745001 chrX_15745001 RAL-508 2656 chrX 16100537 16100590 chrX 16100636 16100689 6 99 1.0 1.5 1.2 2.7 152 chrX 16100537 intron,intron CG42353 -,CG42354 - chrX 16100613 intron,intron CG42353 -,CG42354 - chrX 16100689 intron,intron CG42353 -,CG42354 - chrX_6_16100001 chrX_16100001 RAL-508 2657 chrX 16222762 16222806 chrX 16231132 16231176 roo 5 8370 2.5 3.5 3.0 1.2 8414 chrX 16222762 intergenic not near genes chrX 16226969 intergenic not near genes chrX 16231176 intergenic not near genes chrX_5_16225001 chrX_16225001 RAL-508 2658 chrX 16295513 16295528 chrX 16295617 16295632 4 104 3.0 0.0 1.5 1.6 119 chrX 16295513 intron CG9911 - chrX 16295572 intron CG9911 - chrX 16295632 intron CG9911 - chrX_4_16295001 chrX_16295001 RAL-508 2659 chrX 16329404 16329442 chrX 16329503 16329545 6 100 0.0 4.0 2.0 2.0 141 chrX 16329404 intron CG9919 - chrX 16329474 intron CG9919 - chrX 16329545 exon CG9919 - chrX_6_16325001 chrX_16325001 RAL-508 2660 chrX 16407169 16407213 chrX 16407266 16407295 16 95 4.0 6.0 5.0 2.7 126 chrX 16407169 intron CG4301 + chrX 16407232 intron CG4301 + chrX 16407295 intron CG4301 + chrX_16_16405001 chrX_16405001 RAL-508 2661 chrX 16492631 16492677 chrX 16498227 16498243 mdg3 8 5593 2.0 2.5 2.2 2.5 5612 chrX 16492631 intron para - chrX 16495437 intron para - chrX 16498243 intron para - chrX_8_16495001 chrX_16495001 RAL-508 2662 chrX 16529425 16529441 chrX 16529556 16529569 6 130 0.5 5.0 2.8 1.6 144 chrX 16529425 intron para - chrX 16529497 intron para - chrX 16529569 intron para - chrX_6_16525001 chrX_16525001 RAL-508 2663 chrX 16573106 16573128 chrX 16573203 16573225 8 95 6.0 0.5 3.2 1.9 119 chrX 16573106 intron CanA-14F - chrX 16573166 intron CanA-14F - chrX 16573225 intron CanA-14F - chrX_8_16570001 chrX_16570001 RAL-508 2664 chrX 16623467 16623481 chrX 16623572 16623587 4 106 4.5 1.5 3.0 1.0 120 chrX 16623467 intergenic not near genes chrX 16623527 intergenic Rok - chrX 16623587 intergenic Rok - chrX_4_16620001 chrX_16620001 RAL-508 2665 chrX 16650909 16650949 chrX 16651006 16651007 7 91 6.0 0.5 3.2 1.7 98 chrX 16650909 intergenic CG32573 +,CG42512 + chrX 16650958 intergenic CG32573 +,CG42512 + chrX 16651007 intergenic CG32573 +,CG42512 + chrX_7_16650001 chrX_16650001 RAL-508 2666 chrX 16700508 16700553 chrX 16700611 16700654 10 102 0.0 4.0 2.0 3.3 146 chrX 16700508 intron,3` UTR CG4678 +,spheroide - chrX 16700581 intron,3` UTR CG4678 +,spheroide - chrX 16700654 intron,3` UTR CG4678 +,spheroide - chrX_10_16700001 chrX_16700001 RAL-508 2667 chrX 16723184 16723209 chrX 16723291 16723316 6 105 6.0 0.0 3.0 1.5 132 chrX 16723184 intron CG32572 + chrX 16723250 intron CG32572 + chrX 16723316 intron CG32572 + chrX_6_16720001 chrX_16720001 RAL-508 2668 chrX 16821216 16821254 chrX 16821316 16821355 4 100 4.0 0.0 2.0 1.3 139 chrX 16821216 intron CG4829 + chrX 16821286 intron CG4829 + chrX 16821355 intron CG4829 + chrX_4_16820001 chrX_16820001 RAL-508 2669 chrX 16935991 16936037 chrX 16936428 16936475 jockey 5 435 0.0 3.5 1.8 1.8 484 chrX 16935991 intron CG4928 + chrX 16936233 intron CG4928 + chrX 16936475 intron CG4928 + chrX_5_16935001 chrX_16935001 RAL-508 2670 chrX 1053117 1053123 chrX 16983076 16983076 5 15929956 13.5 9.0 11.2 0.4 15929959 chrX 1053117 intron CR44779 + chrX 9018096 intron,intron rdgA +,CR43836 - chrX 16983076 intron CG45002 - chrX_5_9015001 chrX_9015001 RAL-508 2671 chrX 16983076 16983076 chrX 19404962 19404964 4 2421887 7.0 11.5 9.2 0.4 2421888 chrX 16983076 intron CG45002 - chrX 18194020 intron Frq2 + chrX 19404964 intron kek5 + chrX_4_18190001 chrX_18190001 RAL-508 2672 chrX 17011955 17011994 chrX 17012057 17012068 5 93 1.5 6.0 3.8 1.0 113 chrX 17011955 intron CG45002 - chrX 17012012 intron CG45002 - chrX 17012068 intron CG45002 - chrX_5_17010001 chrX_17010001 RAL-508 2673 chrX 17012473 17012506 chrX 17012584 17012612 8 110 5.5 0.0 2.8 2.1 139 chrX 17012473 intron CG45002 - chrX 17012542 intron CG45002 - chrX 17012612 intron CG45002 - chrX_8_17010001 chrX_17010001 RAL-508 2674 chrX 17057922 17057965 chrX 17058183 17058226 pogo 4 261 1.5 0.0 0.8 2.2 304 chrX 17057922 intron CG45002 - chrX 17058074 intron CG45002 - chrX 17058226 intron CG45002 - chrX_4_17055001 chrX_17055001 RAL-508 2675 chrX 17063176 17063208 chrX 17063283 17063309 6 106 1.0 3.0 2.0 2.0 133 chrX 17063176 intron CG45002 - chrX 17063242 intron CG45002 - chrX 17063309 intron CG45002 - chrX_6_17060001 chrX_17060001 RAL-508 2676 chrX 17100155 17100170 chrX 17100286 17100301 4 130 4.0 1.0 2.5 1.1 146 chrX 17100155 intron CG4991 + chrX 17100228 intron CG4991 + chrX 17100301 intron CG4991 + chrX_4_17100001 chrX_17100001 RAL-508 2677 chrX 17121533 17121552 chrX 17121636 17121655 5 103 2.5 0.5 1.5 2.0 122 chrX 17121533 intron CG5004 + chrX 17121594 intron CG5004 + chrX 17121655 intron CG5004 + chrX_5_17120001 chrX_17120001 RAL-508 2678 chrX 17195200 17195222 chrX 17200296 17200327 flea 6 5103 7.5 2.5 5.0 1.0 5127 chrX 17195200 3` UTR baz + chrX 17197764 3` UTR baz + chrX 17200327 3` UTR baz + chrX_6_17195001 chrX_17195001 RAL-508 2679 chrX 17205829 17205859 chrX 17205939 17205969 5 109 5.5 3.5 4.5 0.9 140 chrX 17205829 intergenic not near genes chrX 17205899 intergenic not near genes chrX 17205969 intergenic CG32564 + chrX_5_17205001 chrX_17205001 RAL-508 2680 chrX 17210753 17210802 chrX 17210876 17210925 5 123 0.0 3.0 1.5 2.0 172 chrX 17210753 intergenic not near genes chrX 17210839 intergenic not near genes chrX 17210925 intergenic not near genes chrX_5_17210001 chrX_17210001 RAL-508 2681 chrX 17229941 17229958 chrX 17230064 17230081 11 123 5.5 2.5 4.0 2.2 140 chrX 17229941 intergenic CG10597 - chrX 17230011 intergenic CG10597 - chrX 17230081 intergenic CG10597 - chrX_11_17230001 chrX_17230001 RAL-508 2682 chrX 17237513 17237536 chrX 17237617 17237631 8 102 1.5 2.0 1.8 2.9 118 chrX 17237513 intron f + chrX 17237572 intron f + chrX 17237631 intron f + chrX_8_17235001 chrX_17235001 RAL-508 2683 chrX 17282855 17282901 chrX 17282952 17282965 14 92 6.5 1.5 4.0 2.8 110 chrX 17282855 intron CG5445 + chrX 17282910 5` UTR CG5445 + chrX 17282965 5` UTR CG5445 + chrX_14_17280001 chrX_17280001 RAL-508 2684 chrX 17352578 17352621 chrX 17352691 17352744 7 119 0.0 2.5 1.2 3.2 166 chrX 17352578 intergenic not near genes chrX 17352661 intergenic not near genes chrX 17352744 intergenic not near genes chrX_7_17350001 chrX_17350001 RAL-508 2685 chrX 17357518 17357535 chrX 17357631 17357649 4 114 2.0 1.5 1.8 1.4 131 chrX 17357518 intergenic not near genes chrX 17357584 intergenic not near genes chrX 17357649 intergenic not near genes chrX_4_17355001 chrX_17355001 RAL-508 2686 chrX 17502353 17502368 chrX 17502442 17502468 4 97 1.5 3.0 2.2 1.2 115 chrX 17502353 intron CG43658 - chrX 17502410 intron CG43658 - chrX 17502468 intron CG43658 - chrX_4_17500001 chrX_17500001 RAL-508 2687 chrX 17544993 17545025 chrX 17545095 17545127 6 102 1.5 2.5 2.0 2.0 134 chrX 17544993 intron CG43658 - chrX 17545060 intron CG43658 - chrX 17545127 intron CG43658 - chrX_6_17545001 chrX_17545001 RAL-508 2688 chrX 17546996 17547003 chrX 17547149 17547155 4 153 1.0 7.5 4.2 0.8 159 chrX 17546996 intron CG43658 - chrX 17547076 intron CG43658 - chrX 17547155 intron CG43658 - chrX_4_17545001 chrX_17545001 RAL-508 2689 chrX 17740385 17740406 chrX 17740451 17740494 4 76 2.0 3.0 2.5 1.1 109 chrX 17740385 intron CG42684 + chrX 17740440 intron CG42684 + chrX 17740494 intron CG42684 + chrX_4_17740001 chrX_17740001 RAL-508 2690 chrX 17771312 17771328 chrX 17771411 17771414 6 96 6.0 7.5 6.8 0.8 102 chrX 17771312 intron unc-4 + chrX 17771363 intron unc-4 + chrX 17771414 intron unc-4 + chrX_6_17770001 chrX_17770001 RAL-508 2691 chrX 17792948 17792983 chrX 17796251 17796253 flea 4 3302 1.5 1.0 1.2 1.8 3305 chrX 17792948 intron OdsH + chrX 17794600 intron OdsH + chrX 17796253 intron OdsH + chrX_4_17790001 chrX_17790001 RAL-508 2692 chrX 17911847 17911877 chrX 17911950 17911985 4 107 1.0 3.0 2.0 1.3 138 chrX 17911847 intron CG6847 + chrX 17911916 intron CG6847 + chrX 17911985 intron CG6847 + chrX_4_17910001 chrX_17910001 RAL-508 2693 chrX 18093647 18093665 chrX 18093874 18093891 5 224 8.5 6.0 7.2 0.6 244 chrX 18093647 5` UTR RhoGAP16F + chrX 18093769 5` UTR RhoGAP16F + chrX 18093891 5` UTR RhoGAP16F + chrX_5_18090001 chrX_18090001 RAL-508 2694 chrX 18093667 18093690 chrX 18093870 18093897 5 209 3.0 5.5 4.2 1.0 230 chrX 18093667 5` UTR RhoGAP16F + chrX 18093782 5` UTR RhoGAP16F + chrX 18093897 5` UTR RhoGAP16F + chrX_5_18090001 chrX_18090001 RAL-508 2695 chrX 18122820 18122844 chrX 18122916 18122938 6 95 3.5 3.0 3.2 1.4 118 chrX 18122820 5` UTR CR45606 + chrX 18122879 5` UTR CR45606 + chrX 18122938 intergenic CR45606 + chrX_6_18120001 chrX_18120001 RAL-508 2696 chrX 18194045 18194102 chrX 18194600 18194612 BS 21 551 1.0 5.5 3.2 5.0 567 chrX 18194045 intron Frq2 + chrX 18194328 intron Frq2 + chrX 18194612 intron Frq2 + chrX_21_18190001 chrX_18190001 RAL-508 2697 chrX 18205350 18205394 chrX 18206090 18206115 7 734 1.5 1.5 1.5 2.8 765 chrX 18205350 intergenic Her - chrX 18205732 intergenic not near genes chrX 18206115 intergenic not near genes chrX_7_18205001 chrX_18205001 RAL-508 2698 chrX 18218017 18218067 chrX 18218153 18218204 9 136 2.5 1.5 2.0 3.0 187 chrX 18218017 intron CG33639 - chrX 18218110 intron CG33639 - chrX 18218204 intron CG33639 - chrX_9_18215001 chrX_18215001 RAL-508 2699 chrX 18427369 18427405 chrX 18427791 18427836 12 426 6.5 3.5 5.0 2.0 467 chrX 18427369 intergenic CG42323 + chrX 18427602 intergenic not near genes chrX 18427836 intergenic not near genes chrX_12_18425001 chrX_18425001 RAL-508 2700 chrX 18429478 18429519 chrX 18434808 18434849 Transpac 8 5329 2.5 3.5 3.0 2.0 5371 chrX 18429478 intergenic not near genes chrX 18432164 intergenic not near genes chrX 18434849 intergenic not near genes chrX_8_18430001 chrX_18430001 RAL-508 2701 chrX 18455213 18455233 chrX 18455313 18455333 5 100 3.5 1.5 2.5 1.4 120 chrX 18455213 intron CG32547 - chrX 18455273 intron CG32547 - chrX 18455333 intron CG32547 - chrX_5_18455001 chrX_18455001 RAL-508 2702 chrX 18490025 18490056 chrX 18490199 18490219 6 169 3.5 1.5 2.5 1.7 194 chrX 18490025 intergenic CG15046 - chrX 18490122 intergenic not near genes chrX 18490219 intergenic not near genes chrX_6_18490001 chrX_18490001 RAL-508 2703 chrX 18524340 18524373 chrX 18524438 18524472 10 96 2.0 2.0 2.0 3.3 132 chrX 18524340 intron Bx + chrX 18524406 intron Bx + chrX 18524472 intron Bx + chrX_10_18520001 chrX_18520001 RAL-508 2704 chrX 18558777 18558800 chrX 18558863 18558897 10 99 6.0 5.0 5.5 1.5 120 chrX 18558777 intron Bx + chrX 18558837 intron Bx + chrX 18558897 intron Bx + chrX_10_18555001 chrX_18555001 RAL-508 2705 chrX 18574776 18574806 chrX 18574876 18574906 7 99 2.5 0.5 1.5 2.8 130 chrX 18574776 intergenic not near genes chrX 18574841 intergenic not near genes chrX 18574906 intergenic not near genes chrX_7_18570001 chrX_18570001 RAL-508 2706 chrX 18576084 18576100 chrX 18576182 18576198 4 98 0.0 5.5 2.8 1.1 114 chrX 18576084 intergenic not near genes chrX 18576141 intergenic not near genes chrX 18576198 intergenic not near genes chrX_4_18575001 chrX_18575001 RAL-508 2707 chrX 18621739 18621771 chrX 18621859 18621892 8 120 4.5 1.5 3.0 2.0 153 chrX 18621739 intron CR43289 + chrX 18621816 5` UTR CR43289 + chrX 18621892 intergenic CR43289 + chrX_8_18620001 chrX_18620001 RAL-508 2708 chrX 18645018 18645041 chrX 18645115 18645150 8 114 2.0 2.0 2.0 2.7 132 chrX 18645018 intron Rip11 - chrX 18645084 intron Rip11 - chrX 18645150 intron Rip11 - chrX_8_18645001 chrX_18645001 RAL-508 2709 chrX 18774431 18774472 chrX 18774532 18774577 16 102 1.0 2.5 1.8 5.7 146 chrX 18774431 intergenic CCKLR-17D3 - chrX 18774504 intergenic CCKLR-17D3 - chrX 18774577 intergenic not near genes chrX_16_18770001 chrX_18770001 RAL-508 2710 chrX 18896502 18896549 chrX 18896633 18896680 5 131 0.5 2.0 1.2 2.3 178 chrX 18896502 3` UTR CG7349 + chrX 18896591 intergenic CG7349 + chrX 18896680 intergenic CG7349 + chrX_5_18895001 chrX_18895001 RAL-508 2711 chrX 18957049 18957095 chrX 18965732 18965775 roo 7 8681 1.5 2.0 1.8 2.5 8726 chrX 18957049 intron CG43759 + chrX 18961412 intron CG43759 + chrX 18965775 intron CG43759 + chrX_7_18960001 chrX_18960001 RAL-508 2712 chrX 19020593 19020609 chrX 19020691 19020707 5 97 0.0 3.0 1.5 2.0 114 chrX 19020593 intron CG43759 + chrX 19020650 intron CG43759 + chrX 19020707 intron CG43759 + chrX_5_19020001 chrX_19020001 RAL-508 2713 chrX 19047938 19047964 chrX 19050109 19050126 5 2165 22.0 23.5 22.8 0.2 2188 chrX 19047938 intergenic not near genes chrX 19049032 intergenic not near genes chrX 19050126 intergenic Diedel3 + chrX_5_19045001 chrX_19045001 RAL-508 2714 chrX 19060393 19060437 chrX 19065197 19065240 Doc 11 4803 1.0 3.5 2.2 3.4 4847 chrX 19060393 intron CG14190 + chrX 19062816 intron CG14190 + chrX 19065240 intron CG14190 + chrX_11_19060001 chrX_19060001 RAL-508 2715 chrX 19073668 19073696 chrX 19073774 19073792 4 104 7.5 4.0 5.8 0.6 124 chrX 19073668 intergenic not near genes chrX 19073730 intergenic not near genes chrX 19073792 intergenic not near genes chrX_4_19070001 chrX_19070001 RAL-508 2716 chrX 19098761 19098778 chrX 19098859 19098876 5 98 1.0 4.0 2.5 1.4 115 chrX 19098761 intergenic not near genes chrX 19098818 intergenic not near genes chrX 19098876 intergenic not near genes chrX_5_19095001 chrX_19095001 RAL-508 2717 chrX 19106014 19106026 chrX 19106250 19106262 5 235 3.0 5.0 4.0 1.0 248 chrX 19106014 intergenic not near genes chrX 19106138 intergenic not near genes chrX 19106262 intergenic not near genes chrX_5_19105001 chrX_19105001 RAL-508 2718 chrX 19106034 19106038 chrX 19106247 19106275 4 227 2.0 4.5 3.2 1.0 241 chrX 19106034 intergenic not near genes chrX 19106154 intergenic not near genes chrX 19106275 intergenic not near genes chrX_4_19105001 chrX_19105001 RAL-508 2719 chrX 19125660 19125680 chrX 19125764 19125764 4 99 8.0 4.0 6.0 0.6 104 chrX 19125660 intron tgy - chrX 19125712 intron tgy - chrX 19125764 intron tgy - chrX_4_19125001 chrX_19125001 RAL-508 2720 chrX 19125681 19125696 chrX 19125763 19125800 9 98 6.5 4.0 5.2 1.5 119 chrX 19125681 intron tgy - chrX 19125740 intron tgy - chrX 19125800 intron tgy - chrX_9_19125001 chrX_19125001 RAL-508 2721 chrX 19131969 19131975 chrX 19132066 19132070 6 101 4.5 4.5 4.5 1.1 101 chrX 19131969 intergenic not near genes chrX 19132020 intergenic not near genes chrX 19132070 intergenic not near genes chrX_6_19130001 chrX_19130001 RAL-508 2722 chrX 19136536 19136584 chrX 19143475 19143494 412 5 6933 1.0 1.0 1.0 2.5 6958 chrX 19136536 intergenic not near genes chrX 19140015 intergenic not near genes chrX 19143494 3` UTR RhoGAP18B - chrX_5_19140001 chrX_19140001 RAL-508 2723 chrX 19176199 19176234 chrX 19176291 19176321 10 98 0.0 2.5 1.2 4.5 122 chrX 19176199 3` UTR CG7556 - chrX 19176260 3` UTR CG7556 - chrX 19176321 3` UTR CG7556 - chrX_10_19175001 chrX_19175001 RAL-508 2724 chrX 19309656 19309673 chrX 19309728 19309750 4 86 8.5 2.0 5.2 0.6 94 chrX 19309656 intergenic not near genes chrX 19309703 intergenic not near genes chrX 19309750 intergenic not near genes chrX_4_19305001 chrX_19305001 RAL-508 2725 chrX 19318438 19318487 chrX 19318593 19318596 17 149 3.0 4.0 3.5 3.8 158 chrX 19318438 intron out - chrX 19318517 intron out - chrX 19318596 intron out - chrX_17_19315001 chrX_19315001 RAL-508 2726 chrX 19339730 19339761 chrX 19339826 19339857 4 96 0.5 0.5 0.5 2.7 127 chrX 19339730 intron nAChRalpha7 - chrX 19339794 intron nAChRalpha7 - chrX 19339857 intron nAChRalpha7 - chrX_4_19335001 chrX_19335001 RAL-508 2727 chrX 19357007 19357023 chrX 19358427 19358502 NOF 4 1453 2.5 0.0 1.2 1.8 1495 chrX 19357007 intron kek5 + chrX 19357754 intron kek5 + chrX 19358502 intron kek5 + chrX_4_19355001 chrX_19355001 RAL-508 2728 chrX 19380137 19380183 chrX 19380398 19380444 pogo 10 261 3.0 4.0 3.5 2.2 307 chrX 19380137 intron kek5 + chrX 19380290 intron kek5 + chrX 19380444 intron kek5 + chrX_10_19380001 chrX_19380001 RAL-508 2729 chrX 19461127 19461165 chrX 19461243 19461280 12 115 2.0 5.5 3.8 2.5 153 chrX 19461127 intron kek5 + chrX 19461204 intron kek5 + chrX 19461280 intron kek5 + chrX_12_19460001 chrX_19460001 RAL-508 2730 chrX 19472107 19472155 chrX 19472697 19472744 jockey 11 583 3.5 7.0 5.2 1.8 637 chrX 19472107 intergenic kek5 + chrX 19472426 intergenic not near genes chrX 19472744 intergenic not near genes chrX_11_19470001 chrX_19470001 RAL-508 2731 chrX 19500541 19500742 chrX 19500636 19500849 29 100 4.0 3.5 3.8 6.0 308 chrX 19500541 intron,intron CG14200 +,Pfrx + chrX 19500695 intron,intron CG14200 +,Pfrx + chrX 19500849 intron,intron CG14200 +,Pfrx + chrX_29_19500001 chrX_19500001 RAL-508 2732 chrX 19593933 19593972 chrX 19594033 19594072 13 104 4.0 5.0 4.5 2.4 139 chrX 19593933 exon CG14205 + chrX 19594002 intron CG14205 + chrX 19594072 intron CG14205 + chrX_13_19590001 chrX_19590001 RAL-508 2733 chrX 19595727 19595742 chrX 19595836 19595851 4 109 0.0 1.5 0.8 2.2 124 chrX 19595727 intergenic CG14205 + chrX 19595789 intergenic CG14205 + chrX 19595851 intergenic CG14205 + chrX_4_19595001 chrX_19595001 RAL-508 2734 chrX 19662031 19662049 chrX 19662253 19662292 5 239 7.0 4.0 5.5 0.8 261 chrX 19662031 intron CG14223 - chrX 19662162 intron CG14223 - chrX 19662292 intron CG14223 - chrX_5_19660001 chrX_19660001 RAL-508 2735 chrX 19755510 19755553 chrX 19755621 19755664 8 110 1.0 3.0 2.0 2.7 154 chrX 19755510 intron Pmp70 + chrX 19755587 intron Pmp70 + chrX 19755664 intron Pmp70 + chrX_8_19755001 chrX_19755001 RAL-508 2736 chrX 19881439 19881484 chrX 19881534 19881563 9 95 2.5 2.5 2.5 2.6 124 chrX 19881439 intron Hers + chrX 19881501 intron Hers + chrX 19881563 intron Hers + chrX_9_19880001 chrX_19880001 RAL-508 2737 chrX 19971802 19971819 chrX 19971899 19971911 7 95 7.5 8.5 8.0 0.8 109 chrX 19971802 intergenic not near genes chrX 19971856 intergenic not near genes chrX 19971911 intergenic not near genes chrX_7_19970001 chrX_19970001 RAL-508 2738 chrX 19983862 19983894 chrX 19983947 19983994 7 98 0.0 1.0 0.5 4.7 132 chrX 19983862 intergenic not near genes chrX 19983928 intergenic not near genes chrX 19983994 intergenic not near genes chrX_7_19980001 chrX_19980001 RAL-508 2739 chrX 19992413 19992429 chrX 19992491 19992525 5 92 5.0 5.0 5.0 0.8 112 chrX 19992413 intergenic not near genes chrX 19992469 intergenic not near genes chrX 19992525 intergenic not near genes chrX_5_19990001 chrX_19990001 RAL-508 2740 chrX 20037609 20037643 chrX 20037707 20037741 8 96 4.5 3.5 4.0 1.6 132 chrX 20037609 intron Dop2R - chrX 20037675 intron Dop2R - chrX 20037741 intron Dop2R - chrX_8_20035001 chrX_20035001 RAL-508 2741 chrX 20041511 20041561 chrX 20041611 20041660 18 99 2.0 4.0 3.0 4.5 149 chrX 20041511 intron Dop2R - chrX 20041586 intron Dop2R - chrX 20041660 intron Dop2R - chrX_18_20040001 chrX_20040001 RAL-508 2742 chrX 20123018 20123047 chrX 20123155 20123163 6 133 4.5 2.0 3.2 1.4 145 chrX 20123018 intron CG34331 + chrX 20123090 intron CG34331 + chrX 20123163 intron CG34331 + chrX_6_20120001 chrX_20120001 RAL-508 2743 chrX 20144828 20144871 chrX 20145018 20145054 14 189 4.0 4.0 4.0 2.8 226 chrX 20144828 intergenic not near genes chrX 20144941 intergenic not near genes chrX 20145054 intergenic not near genes chrX_14_20140001 chrX_20140001 RAL-508 2744 chrX 20312864 20312904 chrX 20312962 20313002 13 97 2.5 2.0 2.2 4.1 138 chrX 20312864 intron CG1504 - chrX 20312933 intron CG1504 - chrX 20313002 intron CG1504 - chrX_13_20310001 chrX_20310001 RAL-508 2745 chrX 20362854 20362877 chrX 20362951 20362968 7 95 2.0 0.0 1.0 3.5 114 chrX 20362854 intergenic not near genes chrX 20362911 intergenic not near genes chrX 20362968 intergenic not near genes chrX_7_20360001 chrX_20360001 RAL-508 2746 chrX 20374104 20374123 chrX 20374200 20374219 4 96 0.0 8.0 4.0 0.8 115 chrX 20374104 intergenic not near genes chrX 20374162 intergenic not near genes chrX 20374219 intergenic not near genes chrX_4_20370001 chrX_20370001 RAL-508 2747 chrX 20377327 20377351 chrX 20378791 20378811 hobo 7 1474 3.5 5.5 4.5 1.3 1484 chrX 20377327 intergenic not near genes chrX 20378069 intergenic not near genes chrX 20378811 intergenic not near genes chrX_7_20375001 chrX_20375001 RAL-508 2748 chrX 20386802 20386845 chrX 20386908 20386951 14 105 2.5 1.0 1.8 5.0 149 chrX 20386802 intergenic not near genes chrX 20386876 intergenic not near genes chrX 20386951 intergenic not near genes chrX_14_20385001 chrX_20385001 RAL-508 2749 chrX 20443170 20443205 chrX 20443266 20443301 7 96 2.5 2.5 2.5 2.0 131 chrX 20443170 exon CG1695 + chrX 20443236 intron CG1695 + chrX 20443301 intron CG1695 + chrX_7_20440001 chrX_20440001 RAL-508 2750 chrX 20460247 20460289 chrX 20460358 20460402 9 112 4.0 2.5 3.2 2.1 155 chrX 20460247 intron CG32506 + chrX 20460324 intron CG32506 + chrX 20460402 intron CG32506 + chrX_9_20460001 chrX_20460001 RAL-508 2751 chrX 20484371 20484405 chrX 20484496 20484530 12 125 2.5 4.0 3.2 2.9 159 chrX 20484371 intron RhoGAP19D - chrX 20484450 intron RhoGAP19D - chrX 20484530 intron RhoGAP19D - chrX_12_20480001 chrX_20480001 RAL-508 2752 chrX 20575138 20575186 chrX 20575236 20575284 15 96 2.0 2.0 2.0 5.0 146 chrX 20575138 intergenic CG42580 + chrX 20575211 intergenic not near genes chrX 20575284 intergenic not near genes chrX_15_20575001 chrX_20575001 RAL-508 2753 chrX 20578063 20578108 chrX 20578162 20578192 5 94 1.5 3.0 2.2 1.6 129 chrX 20578063 intergenic not near genes chrX 20578128 intergenic not near genes chrX 20578192 intergenic not near genes chrX_5_20575001 chrX_20575001 RAL-508 2754 chrX 20710414 20710442 chrX 20710511 20710539 8 97 1.5 0.0 0.8 4.4 125 chrX 20710414 intergenic not near genes chrX 20710476 intergenic not near genes chrX 20710539 intergenic not near genes chrX_8_20710001 chrX_20710001 RAL-508 2755 chrX 20774573 20774594 chrX 20774673 20774688 5 101 2.5 1.0 1.8 1.8 115 chrX 20774573 intron shakB - chrX 20774630 intron shakB - chrX 20774688 intron shakB - chrX_5_20770001 chrX_20770001 RAL-508 2756 chrX 20836714 20836756 chrX 20844335 20844378 roo 11 7619 2.0 2.5 2.2 3.4 7664 chrX 20836714 intron shakB - chrX 20840546 intron shakB - chrX 20844378 intron shakB - chrX_11_20840001 chrX_20840001 RAL-508 2757 chrX 20897934 20897943 chrX 20898043 20898053 4 108 4.5 0.5 2.5 1.1 119 chrX 20897934 intron shakB - chrX 20897994 intron shakB - chrX 20898053 intron shakB - chrX_4_20895001 chrX_20895001 RAL-508 2758 chrX 20940704 20940738 chrX 20942193 20942227 hobo 12 1488 5.0 0.5 2.8 3.2 1523 chrX 20940704 intergenic not near genes chrX 20941466 intergenic not near genes chrX 20942227 intergenic not near genes chrX_12_20940001 chrX_20940001 RAL-508 2759 chrX 20956941 20956948 chrX 20962435 20962442 I-element 5 5494 3.5 2.0 2.8 1.3 5501 chrX 20956941 intergenic not near genes chrX 20959692 intergenic not near genes chrX 20962442 intergenic Ser6 - chrX_5_20955001 chrX_20955001 RAL-508 2760 chrX 20971096 20971139 chrX 20971301 20971345 8 206 13.0 18.5 15.8 0.5 249 chrX 20971096 intergenic not near genes chrX 20971220 intergenic not near genes chrX 20971345 intergenic not near genes chrX_8_20970001 chrX_20970001 RAL-508 2761 chrX 20144554 20144592 chrX 21085249 21085285 5 940699 9.0 16.5 12.8 0.4 940731 chrX 20144554 intergenic not near genes chrX 20614920 intron RunxA - chrX 21085285 intergenic not near genes chrX_5_20610001 chrX_20610001 RAL-508 2762 chrX 21086120 21086160 chrX 21087169 21087209 jockey 11 1048 4.0 0.5 2.2 3.4 1089 chrX 21086120 intergenic not near genes chrX 21086664 intergenic not near genes chrX 21087209 intergenic not near genes chrX_11_21085001 chrX_21085001 RAL-508 2763 chrX 21088021 21088073 chrX 21088173 21088225 12 148 2.5 0.5 1.5 4.8 204 chrX 21088021 intergenic not near genes chrX 21088123 intergenic not near genes chrX 21088225 intergenic not near genes chrX_12_21085001 chrX_21085001 RAL-508 2764 chrX 21247865 21247913 chrX 21247991 21248044 10 125 1.5 4.0 2.8 2.6 179 chrX 21247865 intron CG32521 - chrX 21247954 intron CG32521 - chrX 21248044 intron CG32521 - chrX_10_21245001 chrX_21245001 RAL-508 2765 chrX 21253289 21253306 chrX 21253364 21253377 4 84 3.0 4.0 3.5 0.9 88 chrX 21253289 intron CG32521 - chrX 21253333 intron CG32521 - chrX 21253377 intron CG32521 - chrX_4_21250001 chrX_21250001 RAL-508 2766 chrX 21264710 21264754 chrX 21264805 21264849 6 94 2.0 4.0 3.0 1.5 139 chrX 21264710 intron CG32521 - chrX 21264780 intron CG32521 - chrX 21264849 intron CG32521 - chrX_6_21260001 chrX_21260001 RAL-508 2767 chrX 21330791 21330845 chrX 21330887 21330941 13 95 5.0 3.5 4.2 2.5 150 chrX 21330791 3` UTR tty - chrX 21330866 3` UTR tty - chrX 21330941 3` UTR tty - chrX_13_21330001 chrX_21330001 RAL-508 2768 chrX 21367505 21367548 chrX 21367604 21367648 9 99 1.5 1.5 1.5 3.6 143 chrX 21367505 intron,intron bbx +,waw + chrX 21367576 intron,intron bbx +,waw + chrX 21367648 intron,intron bbx +,waw + chrX_9_21365001 chrX_21365001 RAL-508 2769 chrX 21410640 21410666 chrX 21410739 21410765 4 99 0.0 1.0 0.5 2.7 125 chrX 21410640 intergenic CR45003 - chrX 21410702 intergenic CR45003 - chrX 21410765 intergenic CR45003 - chrX_4_21410001 chrX_21410001 RAL-508 2770 chrX 21419195 21419235 chrX 21419300 21419340 5 105 0.0 1.0 0.5 3.3 145 chrX 21419195 intergenic not near genes chrX 21419268 intergenic not near genes chrX 21419340 intergenic not near genes chrX_5_21415001 chrX_21415001 RAL-508 2771 chrX 21458702 21458725 chrX 21464156 21464181 Ivk 7 5455 0.0 7.0 3.5 1.6 5479 chrX 21458702 intergenic not near genes chrX 21461442 intergenic not near genes chrX 21464181 intergenic not near genes chrX_7_21460001 chrX_21460001 RAL-508 2772 chrX 21500553 21500570 chrX 21500774 21500791 6 221 1.0 1.5 1.2 2.7 238 chrX 21500553 intron CR45082 - chrX 21500672 intron CR45082 - chrX 21500791 intron CR45082 - chrX_6_21500001 chrX_21500001 RAL-508 2773 chrX 21565395 21565439 chrX 21565493 21565537 9 98 1.5 4.5 3.0 2.2 142 chrX 21565395 intergenic not near genes chrX 21565466 intergenic not near genes chrX 21565537 intergenic not near genes chrX_9_21565001 chrX_21565001 RAL-508 2774 chrX 21573878 21573900 chrX 21573985 21573997 5 105 2.5 2.5 2.5 1.4 119 chrX 21573878 intergenic not near genes chrX 21573938 intergenic not near genes chrX 21573997 intergenic not near genes chrX_5_21570001 chrX_21570001 RAL-508 2775 chrX 21575523 21575546 chrX 21575622 21575645 5 98 2.5 1.0 1.8 1.8 122 chrX 21575523 intergenic not near genes chrX 21575584 intergenic not near genes chrX 21575645 intergenic not near genes chrX_5_21575001 chrX_21575001 RAL-508 2776 chrX 21581539 21581571 chrX 21581639 21581671 4 100 1.0 0.0 0.5 2.7 132 chrX 21581539 intergenic not near genes chrX 21581605 intergenic not near genes chrX 21581671 intergenic not near genes chrX_4_21580001 chrX_21580001 RAL-508 2777 chrX 21668237 21668288 chrX 21668342 21668393 16 102 28.0 21.0 24.5 0.6 156 chrX 21668237 intergenic not near genes chrX 21668315 intergenic not near genes chrX 21668393 intergenic not near genes chrX_16_21665001 chrX_21665001 RAL-508 2778 chrX 22259785 22259791 chrX 22260223 22260231 rover 4 440 99.0 18.5 58.8 0.1 446 chrX 22259785 intergenic not near genes chrX 22260008 intergenic not near genes chrX 22260231 intergenic not near genes chrX_4_22260001 chrX_22260001 RAL-508 2779 chrX 22478871 22478893 chrX 22479024 22479046 11 153 0.0 1.0 0.5 7.3 175 chrX 22478871 intron CG12576 - chrX 22478958 intron CG12576 - chrX 22479046 intron CG12576 - chrX_11_22475001 chrX_22475001 RAL-508 2780 chrX 22492465 22492510 chrX 22492998 22493043 8 530 4.5 4.5 4.5 1.5 578 chrX 22492465 intron l(1)G0196 + chrX 22492754 intron l(1)G0196 + chrX 22493043 intron l(1)G0196 + chrX_8_22490001 chrX_22490001 RAL-508 2781 chrX 22522617 22522659 chrX 22525457 22525481 NOF 6 2837 4.0 2.0 3.0 1.5 2864 chrX 22522617 intron CG17600 + chrX 22524049 intron CG17600 + chrX 22525481 intron CG17600 + chrX_6_22520001 chrX_22520001 RAL-508 2782 chrX 22564556 22564584 chrX 22575124 22575145 jockey 10 10555 12.5 12.0 12.2 0.8 10589 chrX 22564556 intergenic not near genes chrX 22569850 intergenic not near genes chrX 22575145 intergenic not near genes chrX_10_22565001 chrX_22565001 RAL-508 2783 chrX 22585505 22585534 chrX 22585600 22585637 4 101 3.0 4.0 3.5 0.9 132 chrX 22585505 intron Cda4 - chrX 22585571 intron Cda4 - chrX 22585637 intron Cda4 - chrX_4_22585001 chrX_22585001 RAL-508 2784 chrX 22646513 22646527 chrX 22646633 22646648 4 120 3.5 0.0 1.8 1.4 135 chrX 22646513 intergenic not near genes chrX 22646580 intergenic not near genes chrX 22646648 intergenic not near genes chrX_4_22645001 chrX_22645001 RAL-508 2785 chrX 22658520 22658544 chrX 22658642 22658662 8 122 0.5 1.0 0.8 4.4 142 chrX 22658520 intron CR44997 + chrX 22658591 intron CR44997 + chrX 22658662 intron CR44997 + chrX_8_22655001 chrX_22655001 RAL-508 2786 chrX 22697479 22697521 chrX 22701796 22701838 Juan 17 4316 4.0 5.5 4.8 2.9 4359 chrX 22697479 intron CR44997 + chrX 22699658 intron CR44997 + chrX 22701838 intron CR44997 + chrX_17_22695001 chrX_22695001 RAL-508 2787 chrX 22764361 22764397 chrX 22764477 22764513 6 114 2.5 4.0 3.2 1.4 152 chrX 22764361 intron CR44997 + chrX 22764437 intron CR44997 + chrX 22764513 intron CR44997 + chrX_6_22760001 chrX_22760001 RAL-508 2788 chrX 22771505 22771535 chrX 22774805 22774843 297 14 3308 4.5 6.0 5.2 2.3 3338 chrX 22771505 intron CR44997 + chrX 22773174 intron CR44997 + chrX 22774843 intron CR44997 + chrX_14_22770001 chrX_22770001 RAL-508 2789 chrX 22820940 22820989 chrX 22821148 22821197 8 208 2.0 2.0 2.0 2.7 257 chrX 22820940 intergenic not near genes chrX 22821068 intergenic not near genes chrX 22821197 intergenic not near genes chrX_8_22820001 chrX_22820001 RAL-508 2790 chrX 22870853 22870900 chrX 22870963 22871011 8 99 0.5 3.5 2.0 2.7 158 chrX 22870853 intron,3` UTR CG42346 +,CR43656 - chrX 22870932 intron,3` UTR CG42346 +,CR43656 - chrX 22871011 intron,3` UTR CG42346 +,CR43656 - chrX_8_22870001 chrX_22870001 RAL-508 2791 chrX 22922519 22922537 chrX 22922619 22922637 5 99 5.5 5.0 5.2 0.8 118 chrX 22922519 intergenic not near genes chrX 22922578 intergenic not near genes chrX 22922637 intergenic not near genes chrX_5_22920001 chrX_22920001 RAL-508 2792 chrX 22963047 22963097 chrX 22963143 22963193 14 94 1.5 1.5 1.5 5.6 146 chrX 22963047 intergenic not near genes chrX 22963120 intergenic not near genes chrX 22963193 intergenic not near genes chrX_14_22960001 chrX_22960001 RAL-508 2793 chrX 22982818 22982873 chrX 22983021 22983061 17 200 2.5 1.5 2.0 5.7 243 chrX 22982818 3` UTR,exon stnA -,stnB - chrX 22982940 intron,intron stnA -,stnB - chrX 22983061 intron,intron stnA -,stnB - chrX_17_22980001 chrX_22980001 RAL-508 2794 chrX 22987100 22987127 chrX 22989778 22989806 Burdock 6 2677 1.5 1.0 1.2 2.7 2706 chrX 22987100 intron,intron stnA -,stnB - chrX 22988453 intron,intron stnA -,stnB - chrX 22989806 intron,intron stnA -,stnB - chrX_6_22985001 chrX_22985001 RAL-508 2795 chrX 22996299 22996338 chrX 23003551 23003588 roo 12 7252 3.5 2.5 3.0 3.0 7289 chrX 22996299 intron,intron stnA -,stnB - chrX 22999944 intron,intron stnA -,stnB - chrX 23003588 intron,intron stnA -,stnB - chrX_12_22995001 chrX_22995001 RAL-508 2796 chrY 975809 975828 chrY 975878 975906 5 112 118.5 141.0 129.8 0.0 97 chrY 975809 intergenic not near genes chrY 975858 intergenic not near genes chrY 975906 intergenic not near genes chrY_5_975001 chrY_975001 RAL-508 2797 chrY 3666427 3666449 chrY 3666597 3666622 4 172 3.0 2.0 2.5 1.1 195 chrY 3666427 intergenic not near genes chrY 3666524 intergenic not near genes chrY 3666622 intergenic not near genes chrY_4_3665001 chrY_3665001 RAL-508