SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 47450 47489 chr2L 52570 52603 jockey 17 5121 11.5 6.0 8.8 1.7 5153 chr2L 47450 intron Cda5 - chr2L 50026 intron Cda5 - chr2L 52603 intron Cda5 - chr2L_17_50001 chr2L_50001 RAL-492 2 chr2L 73775 73811 chr2L 73897 73939 8 122 8.5 2.5 5.5 1.2 164 chr2L 73775 3` UTR,intron CR44987 -,galectin + chr2L 73857 intron galectin + chr2L 73939 intron galectin + chr2L_8_70001 chr2L_70001 RAL-492 3 chr2L 172046 172077 chr2L 172145 172178 5 101 4.0 3.0 3.5 1.1 132 chr2L 172046 intron spen + chr2L 172112 intron spen + chr2L 172178 intron spen + chr2L_5_170001 chr2L_170001 RAL-492 4 chr2L 262719 262764 chr2L 262813 262861 15 95 3.5 6.5 5.0 2.5 142 chr2L 262719 intron,3` UTR,5` UTR CG3645 -,CG17075 -,CR44219 + chr2L 262790 intron,3` UTR,5` UTR CG3645 -,CG17075 -,CR44219 + chr2L 262861 intron,3` UTR,5` UTR CG3645 -,CG17075 -,CR44219 + chr2L_15_260001 chr2L_260001 RAL-492 5 chr2L 263279 263330 chr2L 263445 263496 15 161 1.0 4.0 2.5 4.3 217 chr2L 263279 intron,3` UTR CG3645 -,CG17075 - chr2L 263388 intron,3` UTR CG3645 -,CG17075 - chr2L 263496 intron,3` UTR CG3645 -,CG17075 - chr2L_15_260001 chr2L_260001 RAL-492 6 chr2L 347882 347918 chr2L 355387 355428 blood 12 7517 1.0 4.5 2.8 3.2 7546 chr2L 347882 3` UTR Plc21C + chr2L 351655 intron Plc21C + chr2L 355428 3` UTR Plc21C + chr2L_12_350001 chr2L_350001 RAL-492 7 chr2L 371429 371457 chr2L 371525 371556 8 98 2.5 5.5 4.0 1.6 127 chr2L 371429 intergenic not near genes chr2L 371492 intergenic not near genes chr2L 371556 intergenic not near genes chr2L_8_370001 chr2L_370001 RAL-492 8 chr2L 522523 522526 chr2L 522605 522624 4 90 0.0 9.0 4.5 0.7 101 chr2L 522523 intron ush + chr2L 522574 intron ush + chr2L 522624 intron ush + chr2L_4_520001 chr2L_520001 RAL-492 9 chr2L 590600 590652 chr2L 590720 590766 9 110 5.0 4.5 4.8 1.6 166 chr2L 590600 intron Gsc - chr2L 590683 intron Gsc - chr2L 590766 intron Gsc - chr2L_9_590001 chr2L_590001 RAL-492 10 chr2L 617338 617385 chr2L 617435 617482 4 96 2.5 0.0 1.2 1.8 144 chr2L 617338 intergenic not near genes chr2L 617410 intergenic not near genes chr2L 617482 intergenic not near genes chr2L_4_615001 chr2L_615001 RAL-492 11 chr2L 630304 630329 chr2L 630406 630430 9 108 3.5 3.0 3.2 2.1 126 chr2L 630304 intergenic not near genes chr2L 630367 intergenic not near genes chr2L 630430 intergenic not near genes chr2L_9_630001 chr2L_630001 RAL-492 12 chr2L 679706 679755 chr2L 679819 679869 16 115 3.0 2.5 2.8 4.2 163 chr2L 679706 intron ds - chr2L 679788 intron ds - chr2L 679869 intron ds - chr2L_16_675001 chr2L_675001 RAL-492 13 chr2L 686922 686940 chr2L 695958 696000 roo 6 9056 3.5 5.0 4.2 1.2 9078 chr2L 686922 intron ds - chr2L 691461 intron ds - chr2L 696000 intron ds - chr2L_6_690001 chr2L_690001 RAL-492 14 chr2L 705208 705258 chr2L 705318 705371 4 107 3.5 0.0 1.8 1.4 163 chr2L 705208 intron ds - chr2L 705290 intron ds - chr2L 705371 intron ds - chr2L_4_705001 chr2L_705001 RAL-492 15 chr2L 764542 764572 chr2L 764643 764673 9 100 5.5 4.0 4.8 1.6 131 chr2L 764542 intergenic not near genes chr2L 764608 intergenic not near genes chr2L 764673 intergenic not near genes chr2L_9_760001 chr2L_760001 RAL-492 16 chr2L 770447 770474 chr2L 772248 772275 Bari1 7 1798 4.0 5.5 4.8 1.2 1828 chr2L 770447 intergenic not near genes chr2L 771361 intergenic not near genes chr2L 772275 intergenic CR44614 + chr2L_7_770001 chr2L_770001 RAL-492 17 chr2L 770478 770494 chr2L 772244 772294 Bari1 5 1785 1.0 5.0 3.0 1.2 1816 chr2L 770478 intergenic not near genes chr2L 771386 intergenic not near genes chr2L 772294 intergenic CR44614 + chr2L_5_770001 chr2L_770001 RAL-492 18 chr2L 795907 795952 chr2L 796068 796114 8 156 3.0 4.0 3.5 1.8 207 chr2L 795907 intergenic not near genes chr2L 796010 intergenic not near genes chr2L 796114 intergenic not near genes chr2L_8_795001 chr2L_795001 RAL-492 19 chr2L 804033 804052 chr2L 804124 804150 7 109 0.0 6.5 3.2 1.7 117 chr2L 804033 intergenic not near genes chr2L 804092 intergenic not near genes chr2L 804150 intergenic not near genes chr2L_7_800001 chr2L_800001 RAL-492 20 chr2L 849453 849481 chr2L 849564 849575 7 106 6.5 4.0 5.2 1.1 122 chr2L 849453 intron drongo - chr2L 849514 intron drongo - chr2L 849575 intron drongo - chr2L_7_845001 chr2L_845001 RAL-492 21 chr2L 919912 919926 chr2L 920005 920022 8 94 0.5 4.5 2.5 2.3 110 chr2L 919912 intergenic not near genes chr2L 919967 intergenic not near genes chr2L 920022 intergenic not near genes chr2L_8_915001 chr2L_915001 RAL-492 22 chr2L 922450 922489 chr2L 922551 922590 15 100 0.5 4.0 2.2 4.7 140 chr2L 922450 intergenic CG4341 + chr2L 922520 intergenic CG4341 + chr2L 922590 intergenic CG4341 + chr2L_15_920001 chr2L_920001 RAL-492 23 chr2L 931629 931665 chr2L 931710 931764 13 95 4.0 6.5 5.2 2.1 135 chr2L 931629 intron CG4341 + chr2L 931696 intron CG4341 + chr2L 931764 intron CG4341 + chr2L_13_930001 chr2L_930001 RAL-492 24 chr2L 935371 935393 chr2L 935475 935497 4 104 2.5 0.0 1.2 1.8 126 chr2L 935371 intron CG4341 + chr2L 935434 intron CG4341 + chr2L 935497 intron CG4341 + chr2L_4_935001 chr2L_935001 RAL-492 25 chr2L 953477 953524 chr2L 953581 953610 11 92 4.0 7.5 5.8 1.6 133 chr2L 953477 exon CG4341 + chr2L 953544 intron CG4341 + chr2L 953610 intron CG4341 + chr2L_11_950001 chr2L_950001 RAL-492 26 chr2L 976859 976895 chr2L 984515 984546 roo 11 7655 3.0 3.5 3.2 2.6 7687 chr2L 976859 intergenic not near genes chr2L 980702 intergenic not near genes chr2L 984546 intergenic not near genes chr2L_11_980001 chr2L_980001 RAL-492 27 chr2L 996705 996748 chr2L 1005820 1005863 roo 6 9114 0.0 3.0 1.5 2.4 9158 chr2L 996705 intergenic not near genes chr2L 1001284 intergenic not near genes chr2L 1005863 intergenic not near genes chr2L_6_1000001 chr2L_1000001 RAL-492 28 chr2L 1089953 1089996 chr2L 1090168 1090212 9 208 5.5 2.0 3.8 1.9 259 chr2L 1089953 intron CG4629 - chr2L 1090082 intron CG4629 - chr2L 1090212 intron CG4629 - chr2L_9_1090001 chr2L_1090001 RAL-492 29 chr2L 1090364 1090380 chr2L 1090472 1090487 4 109 0.0 1.5 0.8 2.2 123 chr2L 1090364 intron CG4629 - chr2L 1090426 intron CG4629 - chr2L 1090487 intron CG4629 - chr2L_4_1090001 chr2L_1090001 RAL-492 30 chr2L 1127163 1127184 chr2L 1127262 1127280 5 98 7.0 8.0 7.5 0.6 117 chr2L 1127163 intron Pino - chr2L 1127222 intron Pino - chr2L 1127280 intron Pino - chr2L_5_1125001 chr2L_1125001 RAL-492 31 chr2L 1156840 1156894 chr2L 1156965 1156999 14 118 4.0 6.0 5.0 2.3 159 chr2L 1156840 intron capt - chr2L 1156920 intron capt - chr2L 1156999 intron capt - chr2L_14_1155001 chr2L_1155001 RAL-492 32 chr2L 1164239 1164282 chr2L 1164344 1164388 14 104 4.5 1.5 3.0 3.5 149 chr2L 1164239 intergenic IntS14 +,CG5080 - chr2L 1164314 intergenic IntS14 +,CG5080 - chr2L 1164388 intergenic IntS14 + chr2L_14_1160001 chr2L_1160001 RAL-492 33 chr2L 1220107 1220162 chr2L 1227593 1227648 blood 17 7485 4.0 3.5 3.8 3.5 7541 chr2L 1220107 intron CG42329 + chr2L 1223878 intron CG42329 + chr2L 1227648 intron CG42329 + chr2L_17_1220001 chr2L_1220001 RAL-492 34 chr2L 1261215 1261258 chr2L 1261313 1261335 7 94 0.0 0.0 0.0 7.0 120 chr2L 1261215 intron robo3 + chr2L 1261275 intron robo3 + chr2L 1261335 intron robo3 + chr2L_7_1260001 chr2L_1260001 RAL-492 35 chr2L 1301782 1301783 chr2L 1302300 1302340 gypsy 4 534 0.0 5.5 2.8 1.1 558 chr2L 1301782 intergenic not near genes chr2L 1302061 intergenic not near genes chr2L 1302340 intergenic not near genes chr2L_4_1300001 chr2L_1300001 RAL-492 36 chr2L 1322008 1322027 chr2L 1322112 1322134 5 105 6.0 2.0 4.0 1.0 126 chr2L 1322008 intergenic not near genes chr2L 1322071 intergenic not near genes chr2L 1322134 intergenic not near genes chr2L_5_1320001 chr2L_1320001 RAL-492 37 chr2L 1322029 1322050 chr2L 1322111 1322158 6 94 3.0 2.0 2.5 1.7 129 chr2L 1322029 intergenic not near genes chr2L 1322094 intergenic not near genes chr2L 1322158 intergenic not near genes chr2L_6_1320001 chr2L_1320001 RAL-492 38 chr2L 1331056 1331094 chr2L 1331153 1331191 5 92 1.5 1.5 1.5 2.0 135 chr2L 1331056 intergenic not near genes chr2L 1331124 intergenic not near genes chr2L 1331191 intergenic not near genes chr2L_5_1330001 chr2L_1330001 RAL-492 39 chr2L 1333748 1333758 chr2L 1333891 1333903 5 143 0.0 4.0 2.0 1.7 155 chr2L 1333748 intergenic CG5440 + chr2L 1333826 intergenic CG5440 + chr2L 1333903 intergenic CG5440 + chr2L_5_1330001 chr2L_1330001 RAL-492 40 chr2L 1457464 1457497 chr2L 1457611 1457646 7 139 0.0 1.0 0.5 4.7 182 chr2L 1457464 intergenic not near genes chr2L 1457555 intergenic not near genes chr2L 1457646 intergenic not near genes chr2L_7_1455001 chr2L_1455001 RAL-492 41 chr2L 1511961 1512001 chr2L 1512077 1512118 8 117 3.5 2.5 3.0 2.0 157 chr2L 1511961 intergenic not near genes chr2L 1512040 intergenic not near genes chr2L 1512118 intergenic not near genes chr2L_8_1510001 chr2L_1510001 RAL-492 42 chr2L 1536511 1536526 chr2L 1536632 1536643 7 132 0.0 5.5 2.8 1.8 132 chr2L 1536511 intergenic not near genes chr2L 1536577 intergenic not near genes chr2L 1536643 intergenic not near genes chr2L_7_1535001 chr2L_1535001 RAL-492 43 chr2L 1570672 1570715 chr2L 1573562 1573606 F-element 10 2892 5.0 2.5 3.8 2.1 2934 chr2L 1570672 intron haf + chr2L 1572139 intron haf + chr2L 1573606 intron haf + chr2L_10_1570001 chr2L_1570001 RAL-492 44 chr2L 1579563 1579588 chr2L 1579664 1579689 9 101 6.5 0.5 3.5 2.0 126 chr2L 1579563 intron haf + chr2L 1579626 intron haf + chr2L 1579689 intron haf + chr2L_9_1575001 chr2L_1575001 RAL-492 45 chr2L 1591861 1591867 chr2L 1591964 1591968 4 103 6.0 6.0 6.0 0.6 107 chr2L 1591861 intron haf + chr2L 1591914 intron haf + chr2L 1591968 intron haf + chr2L_4_1590001 chr2L_1590001 RAL-492 46 chr2L 1591870 1591892 chr2L 1591953 1591996 7 98 2.0 4.5 3.2 1.7 126 chr2L 1591870 intron haf + chr2L 1591933 intron haf + chr2L 1591996 intron haf + chr2L_7_1590001 chr2L_1590001 RAL-492 47 chr2L 1615376 1615414 chr2L 1615476 1615513 7 99 0.5 2.5 1.5 2.8 137 chr2L 1615376 intergenic not near genes chr2L 1615444 intergenic not near genes chr2L 1615513 intergenic not near genes chr2L_7_1615001 chr2L_1615001 RAL-492 48 chr2L 1628813 1628834 chr2L 1629160 1629183 6 349 5.0 2.0 3.5 1.3 370 chr2L 1628813 intergenic not near genes chr2L 1628998 intergenic not near genes chr2L 1629183 intergenic not near genes chr2L_6_1625001 chr2L_1625001 RAL-492 49 chr2L 1678963 1679006 chr2L 1686448 1686491 blood 4 7485 1.0 5.5 3.2 1.0 7528 chr2L 1678963 intron chinmo + chr2L 1682727 intron chinmo + chr2L 1686491 intron chinmo + chr2L_4_1680001 chr2L_1680001 RAL-492 50 chr2L 1707249 1707294 chr2L 1707345 1707390 6 94 3.5 2.5 3.0 1.5 141 chr2L 1707249 3` UTR CG17660 - chr2L 1707320 3` UTR CG17660 - chr2L 1707390 3` UTR CG17660 - chr2L_6_1705001 chr2L_1705001 RAL-492 51 chr2L 1711339 1711388 chr2L 1711683 1711686 mdg3 11 332 5.5 10.0 7.8 1.2 347 chr2L 1711339 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711512 3` UTR frtz - chr2L 1711686 3` UTR frtz - chr2L_11_1710001 chr2L_1710001 RAL-492 52 chr2L 1736008 1736043 chr2L 1736142 1736144 14 131 4.5 4.5 4.5 2.5 136 chr2L 1736008 intron CG17646 + chr2L 1736076 intron CG17646 + chr2L 1736144 intron CG17646 + chr2L_14_1735001 chr2L_1735001 RAL-492 53 chr2L 1753216 1753219 chr2L 1753318 1753326 4 106 0.0 5.0 2.5 1.1 110 chr2L 1753216 intergenic CG17648 + chr2L 1753271 intergenic CG17648 + chr2L 1753326 intergenic CG17648 + chr2L_4_1750001 chr2L_1750001 RAL-492 54 chr2L 1790697 1790745 chr2L 1791172 1791220 19 473 5.5 3.5 4.5 3.5 523 chr2L 1790697 exon Gr22c - chr2L 1790958 exon Gr22c - chr2L 1791220 exon Gr22c - chr2L_19_1790001 chr2L_1790001 RAL-492 55 chr2L 1795442 1795481 chr2L 1795539 1795588 11 98 2.0 3.0 2.5 3.1 146 chr2L 1795442 intergenic not near genes chr2L 1795515 intergenic not near genes chr2L 1795588 intergenic not near genes chr2L_11_1795001 chr2L_1795001 RAL-492 56 chr2L 1828961 1829005 chr2L 1829065 1829109 21 94 3.0 5.5 4.2 4.0 148 chr2L 1828961 intergenic not near genes chr2L 1829035 intergenic not near genes chr2L 1829109 intergenic not near genes chr2L_21_1825001 chr2L_1825001 RAL-492 57 chr2L 1849308 1849350 chr2L 1849419 1849431 10 103 2.5 0.5 1.5 4.0 123 chr2L 1849308 intron wry + chr2L 1849370 intron wry + chr2L 1849431 intron wry + chr2L_10_1845001 chr2L_1845001 RAL-492 58 chr2L 1852943 1852995 chr2L 1853047 1853095 4 99 4.0 0.0 2.0 1.3 152 chr2L 1852943 intron wry + chr2L 1853019 intron wry + chr2L 1853095 intron wry + chr2L_4_1850001 chr2L_1850001 RAL-492 59 chr2L 1879493 1879532 chr2L 1879613 1879650 7 119 3.0 3.5 3.2 1.7 157 chr2L 1879493 intron CG31663 - chr2L 1879572 intron CG31663 - chr2L 1879650 intron CG31663 - chr2L_7_1875001 chr2L_1875001 RAL-492 60 chr2L 1905065 1905110 chr2L 1905188 1905233 7 122 3.0 4.5 3.8 1.5 168 chr2L 1905065 intron CG7337 + chr2L 1905149 intron CG7337 + chr2L 1905233 intron CG7337 + chr2L_7_1905001 chr2L_1905001 RAL-492 61 chr2L 1912699 1912755 chr2L 1912796 1912821 6 89 1.0 2.5 1.8 2.1 122 chr2L 1912699 intron CG7337 + chr2L 1912760 intron CG7337 + chr2L 1912821 intron CG7337 + chr2L_6_1910001 chr2L_1910001 RAL-492 62 chr2L 1925479 1925499 chr2L 1925565 1925596 7 95 5.0 2.5 3.8 1.5 117 chr2L 1925479 intron CG7337 + chr2L 1925538 intron CG7337 + chr2L 1925596 intron CG7337 + chr2L_7_1925001 chr2L_1925001 RAL-492 63 chr2L 1948611 1948632 chr2L 1948738 1948759 5 127 0.0 0.0 0.0 5.0 148 chr2L 1948611 intergenic not near genes chr2L 1948685 intergenic not near genes chr2L 1948759 intergenic not near genes chr2L_5_1945001 chr2L_1945001 RAL-492 64 chr2L 1958732 1958769 chr2L 1958828 1958866 22 96 6.5 4.0 5.2 3.5 134 chr2L 1958732 intron erm - chr2L 1958799 intron erm - chr2L 1958866 intron erm - chr2L_22_1955001 chr2L_1955001 RAL-492 65 chr2L 1958770 1958779 chr2L 1958826 1958876 5 89 4.0 4.0 4.0 1.0 106 chr2L 1958770 intron erm - chr2L 1958823 intron erm - chr2L 1958876 intron erm - chr2L_5_1955001 chr2L_1955001 RAL-492 66 chr2L 2014062 2014077 chr2L 2014153 2014160 9 106 2.0 0.5 1.2 4.1 98 chr2L 2014062 intron CG4238 + chr2L 2014111 intron CG4238 + chr2L 2014160 intron CG4238 + chr2L_9_2010001 chr2L_2010001 RAL-492 67 chr2L 2100376 2100392 chr2L 2109546 2109547 roo 4 9163 8.5 11.0 9.8 0.4 9171 chr2L 2100376 intron dpr3 - chr2L 2104962 intron dpr3 - chr2L 2109547 intron dpr3 - chr2L_4_2100001 chr2L_2100001 RAL-492 68 chr2L 2100393 2100407 chr2L 2109537 2109546 roo 4 9152 4.5 8.5 6.5 0.5 9153 chr2L 2100393 intron dpr3 - chr2L 2104970 intron dpr3 - chr2L 2109546 intron dpr3 - chr2L_4_2100001 chr2L_2100001 RAL-492 69 chr2L 2112117 2112133 chr2L 2119781 2119792 opus 6 7667 4.5 5.5 5.0 1.0 7675 chr2L 2112117 intergenic not near genes chr2L 2115954 intergenic not near genes chr2L 2119792 intergenic not near genes chr2L_6_2115001 chr2L_2115001 RAL-492 70 chr2L 2112136 2112146 chr2L 2119773 2119775 opus 6 7645 3.5 3.5 3.5 1.3 7639 chr2L 2112136 intergenic not near genes chr2L 2115956 intergenic not near genes chr2L 2119775 intergenic not near genes chr2L_6_2115001 chr2L_2115001 RAL-492 71 chr2L 2207651 2207657 chr2L 2207747 2207750 4 96 15.0 6.5 10.8 0.3 99 chr2L 2207651 exon CG33124 - chr2L 2207700 exon CG33124 - chr2L 2207750 exon CG33124 - chr2L_4_2205001 chr2L_2205001 RAL-492 72 chr2L 2207674 2207698 chr2L 2207746 2207792 7 88 7.5 6.0 6.8 0.9 118 chr2L 2207674 exon CG33124 - chr2L 2207733 exon CG33124 - chr2L 2207792 exon CG33124 - chr2L_7_2205001 chr2L_2205001 RAL-492 73 chr2L 2250401 2250445 chr2L 2251188 2251211 8 771 5.5 0.0 2.8 2.1 810 chr2L 2250401 intergenic Ser12 - chr2L 2250806 exon Ser12 - chr2L 2251211 exon Ser12 - chr2L_8_2250001 chr2L_2250001 RAL-492 74 chr2L 2262309 2262316 chr2L 2262401 2262413 4 96 5.5 0.5 3.0 1.0 104 chr2L 2262309 intergenic not near genes chr2L 2262361 intergenic not near genes chr2L 2262413 intergenic not near genes chr2L_4_2260001 chr2L_2260001 RAL-492 75 chr2L 2290561 2290619 chr2L 2290657 2290680 8 84 2.0 2.5 2.2 2.5 119 chr2L 2290561 exon robl22E - chr2L 2290620 exon robl22E - chr2L 2290680 intron robl22E - chr2L_8_2290001 chr2L_2290001 RAL-492 76 chr2L 2293270 2293294 chr2L 2293382 2293396 8 109 4.5 6.5 5.5 1.2 126 chr2L 2293270 intergenic not near genes chr2L 2293333 intergenic not near genes chr2L 2293396 intergenic not near genes chr2L_8_2290001 chr2L_2290001 RAL-492 77 chr2L 2294065 2294073 chr2L 2299251 2299294 copia 5 5209 2.0 5.5 3.8 1.0 5229 chr2L 2294065 intergenic not near genes chr2L 2296680 intergenic not near genes chr2L 2299294 intergenic not near genes chr2L_5_2295001 chr2L_2295001 RAL-492 78 chr2L 2311053 2311079 chr2L 2311169 2311190 5 115 0.5 0.5 0.5 3.3 137 chr2L 2311053 intron CG9967 - chr2L 2311122 intron CG9967 - chr2L 2311190 intron CG9967 - chr2L_5_2310001 chr2L_2310001 RAL-492 79 chr2L 2330854 2330896 chr2L 2330963 2331005 10 109 2.5 5.5 4.0 2.0 151 chr2L 2330854 intron,intron CG9967 -,eys + chr2L 2330930 intron,intron CG9967 -,eys + chr2L 2331005 intron,intron CG9967 -,eys + chr2L_10_2330001 chr2L_2330001 RAL-492 80 chr2L 2355294 2355313 chr2L 2355411 2355422 6 117 9.5 0.0 4.8 1.0 128 chr2L 2355294 intron,intron CG9967 -,eys + chr2L 2355358 intron,intron CG9967 -,eys + chr2L 2355422 intron,intron CG9967 -,eys + chr2L_6_2355001 chr2L_2355001 RAL-492 81 chr2L 2396222 2396234 chr2L 2396352 2396364 5 129 1.5 0.5 1.0 2.5 142 chr2L 2396222 intron VGlut + chr2L 2396293 intron VGlut + chr2L 2396364 intron VGlut + chr2L_5_2395001 chr2L_2395001 RAL-492 82 chr2L 2427359 2427400 chr2L 2427465 2427506 11 105 3.5 2.0 2.8 2.9 147 chr2L 2427359 3` UTR CR44912 - chr2L 2427432 3` UTR CR44912 - chr2L 2427506 3` UTR CR44912 - chr2L_11_2425001 chr2L_2425001 RAL-492 83 chr2L 2541431 2541477 chr2L 2541534 2541575 9 102 3.5 2.0 2.8 2.4 144 chr2L 2541431 intergenic not near genes chr2L 2541503 intergenic not near genes chr2L 2541575 intergenic not near genes chr2L_9_2540001 chr2L_2540001 RAL-492 84 chr2L 2596051 2596097 chr2L 2596488 2596533 4 437 2.0 2.0 2.0 1.3 482 chr2L 2596051 intergenic not near genes chr2L 2596292 intergenic not near genes chr2L 2596533 intergenic not near genes chr2L_4_2595001 chr2L_2595001 RAL-492 85 chr2L 2637209 2637260 chr2L 2637327 2637375 14 113 3.0 4.5 3.8 2.9 166 chr2L 2637209 intergenic not near genes chr2L 2637292 intergenic not near genes chr2L 2637375 intergenic not near genes chr2L_14_2635001 chr2L_2635001 RAL-492 86 chr2L 2661218 2661227 chr2L 2663037 2663069 I-element 4 1836 1.0 1.5 1.2 1.8 1851 chr2L 2661218 intergenic not near genes chr2L 2662144 intergenic not near genes chr2L 2663069 intergenic not near genes chr2L_4_2660001 chr2L_2660001 RAL-492 87 chr2L 2667614 2667658 chr2L 2667702 2667730 10 86 6.5 3.5 5.0 1.7 116 chr2L 2667614 intergenic not near genes chr2L 2667672 intergenic not near genes chr2L 2667730 intergenic not near genes chr2L_10_2665001 chr2L_2665001 RAL-492 88 chr2L 2772599 2772617 chr2L 2779199 2779219 297 5 6600 5.0 8.0 6.5 0.7 6620 chr2L 2772599 3` UTR Syt1 - chr2L 2775909 intron Syt1 - chr2L 2779219 3` UTR Syt1 - chr2L_5_2775001 chr2L_2775001 RAL-492 89 chr2L 2803985 2804015 chr2L 2804082 2804111 8 95 2.5 2.5 2.5 2.3 126 chr2L 2803985 intergenic not near genes chr2L 2804048 intergenic not near genes chr2L 2804111 intergenic not near genes chr2L_8_2800001 chr2L_2800001 RAL-492 90 chr2L 2813161 2813195 chr2L 2813275 2813304 10 124 5.5 2.5 4.0 2.0 143 chr2L 2813161 exon CG2964 + chr2L 2813232 exon CG2964 + chr2L 2813304 exon CG2964 + chr2L_10_2810001 chr2L_2810001 RAL-492 91 chr2L 2830399 2830415 chr2L 2830548 2830565 4 150 2.5 1.0 1.8 1.4 166 chr2L 2830399 intergenic Duox - chr2L 2830482 intergenic Duox - chr2L 2830565 intergenic Duox - chr2L_4_2830001 chr2L_2830001 RAL-492 92 chr2L 2857800 2857834 chr2L 2857896 2857928 6 95 2.0 1.0 1.5 2.4 128 chr2L 2857800 intron CG2991 + chr2L 2857864 intron CG2991 + chr2L 2857928 intron CG2991 + chr2L_6_2855001 chr2L_2855001 RAL-492 93 chr2L 2885363 2885391 chr2L 2885459 2885488 4 96 2.0 3.5 2.8 1.1 125 chr2L 2885363 intron NTPase - chr2L 2885426 intron NTPase - chr2L 2885488 intron NTPase - chr2L_4_2885001 chr2L_2885001 RAL-492 94 chr2L 2911988 2912034 chr2L 2912125 2912158 13 130 2.5 0.5 1.5 5.2 170 chr2L 2911988 intron lilli + chr2L 2912073 intron lilli + chr2L 2912158 intron lilli + chr2L_13_2910001 chr2L_2910001 RAL-492 95 chr2L 2933278 2933314 chr2L 2935485 2935513 pogo 14 2199 3.0 4.0 3.5 3.1 2235 chr2L 2933278 intron lilli + chr2L 2934396 intron lilli + chr2L 2935513 intron lilli + chr2L_14_2930001 chr2L_2930001 RAL-492 96 chr2L 3072996 3073028 chr2L 3078239 3078271 copia 8 5243 1.0 5.0 3.0 2.0 5275 chr2L 3072996 intron toc - chr2L 3075634 intron toc - chr2L 3078271 intron toc - chr2L_8_3075001 chr2L_3075001 RAL-492 97 chr2L 3108868 3108893 chr2L 3108965 3108990 9 95 3.0 8.5 5.8 1.3 122 chr2L 3108868 intron toc - chr2L 3108929 intron toc - chr2L 3108990 intron toc - chr2L_9_3105001 chr2L_3105001 RAL-492 98 chr2L 3189762 3189784 chr2L 3189867 3189889 4 105 3.5 1.0 2.2 1.2 127 chr2L 3189762 intron CG34393 - chr2L 3189826 intron CG34393 - chr2L 3189889 intron CG34393 - chr2L_4_3185001 chr2L_3185001 RAL-492 99 chr2L 3192198 3192241 chr2L 3192326 3192355 14 121 3.5 5.0 4.2 2.7 157 chr2L 3192198 exon CG34393 - chr2L 3192276 intron CG34393 - chr2L 3192355 intron CG34393 - chr2L_14_3190001 chr2L_3190001 RAL-492 100 chr2L 3202719 3202768 chr2L 3210165 3210217 mdg1 12 7446 1.0 1.5 1.2 5.5 7498 chr2L 3202719 intergenic not near genes chr2L 3206468 intergenic not near genes chr2L 3210217 intergenic CR45336 + chr2L_12_3205001 chr2L_3205001 RAL-492 101 chr2L 3233623 3233660 chr2L 3233788 3233831 11 167 3.5 5.0 4.2 2.1 208 chr2L 3233623 intergenic not near genes chr2L 3233727 intergenic not near genes chr2L 3233831 intergenic not near genes chr2L_11_3230001 chr2L_3230001 RAL-492 102 chr2L 3236692 3236739 chr2L 3236797 3236844 18 102 6.0 5.0 5.5 2.8 152 chr2L 3236692 intergenic not near genes chr2L 3236768 intergenic not near genes chr2L 3236844 intergenic not near genes chr2L_18_3235001 chr2L_3235001 RAL-492 103 chr2L 3251475 3251524 chr2L 3259060 3259109 springer 13 7584 5.0 5.0 5.0 2.2 7634 chr2L 3251475 intergenic not near genes chr2L 3255292 intergenic not near genes chr2L 3259109 intergenic not near genes chr2L_13_3255001 chr2L_3255001 RAL-492 104 chr2L 3267595 3267608 chr2L 3267701 3267719 4 110 2.5 4.0 3.2 1.0 124 chr2L 3267595 intergenic not near genes chr2L 3267657 intergenic not near genes chr2L 3267719 intergenic not near genes chr2L_4_3265001 chr2L_3265001 RAL-492 105 chr2L 3348813 3348855 chr2L 3348931 3348973 6 117 2.5 2.0 2.2 1.9 160 chr2L 3348813 intron E23 - chr2L 3348893 intron E23 - chr2L 3348973 intron E23 - chr2L_6_3345001 chr2L_3345001 RAL-492 106 chr2L 3355331 3355345 chr2L 3358472 3358522 10 3154 18.0 46.5 32.2 0.3 3191 chr2L 3355331 intergenic not near genes chr2L 3356926 intergenic not near genes chr2L 3358522 3` UTR CG8838 + chr2L_10_3355001 chr2L_3355001 RAL-492 107 chr2L 3388578 3388629 chr2L 3388839 3388890 pogo 10 258 3.5 2.5 3.0 2.5 312 chr2L 3388578 intergenic CG42460 - chr2L 3388734 intergenic CG42460 - chr2L 3388890 intergenic CG42460 -,CR44791 + chr2L_10_3385001 chr2L_3385001 RAL-492 108 chr2L 3402485 3402539 chr2L 3402581 3402625 19 86 3.0 3.0 3.0 4.8 140 chr2L 3402485 intergenic not near genes chr2L 3402555 intergenic not near genes chr2L 3402625 intergenic not near genes chr2L_19_3400001 chr2L_3400001 RAL-492 109 chr2L 3415966 3416014 chr2L 3416079 3416125 14 112 5.0 2.5 3.8 2.9 159 chr2L 3415966 intron pgant2 - chr2L 3416046 intron pgant2 - chr2L 3416125 intron pgant2 - chr2L_14_3415001 chr2L_3415001 RAL-492 110 chr2L 3498707 3498749 chr2L 3498804 3498846 9 96 2.0 4.5 3.2 2.1 139 chr2L 3498707 intron tim - chr2L 3498776 intron tim - chr2L 3498846 intron tim - chr2L_9_3495001 chr2L_3495001 RAL-492 111 chr2L 3582888 3582912 chr2L 3582978 3582995 8 91 0.5 6.5 3.5 1.8 107 chr2L 3582888 intergenic not near genes chr2L 3582942 intergenic not near genes chr2L 3582995 intergenic not near genes chr2L_8_3580001 chr2L_3580001 RAL-492 112 chr2L 3627872 3627911 chr2L 3627974 3628019 11 105 4.0 2.5 3.2 2.6 147 chr2L 3627872 intron for - chr2L 3627946 intron for - chr2L 3628019 intron for - chr2L_11_3625001 chr2L_3625001 RAL-492 113 chr2L 3649780 3649812 chr2L 3655003 3655033 copia 6 5221 7.0 6.5 6.8 0.8 5253 chr2L 3649780 intron for - chr2L 3652406 intron for - chr2L 3655033 intron for - chr2L_6_3650001 chr2L_3650001 RAL-492 114 chr2L 3663292 3663342 chr2L 3663391 3663440 19 99 4.0 5.5 4.8 3.3 148 chr2L 3663292 5` UTR CG34340 + chr2L 3663366 intron CG34340 + chr2L 3663440 intron CG34340 + chr2L_19_3660001 chr2L_3660001 RAL-492 115 chr2L 3667949 3668057 chr2L 3668050 3668153 6 100 0.0 0.0 0.0 6.0 204 chr2L 3667949 intron CG34340 + chr2L 3668051 intron,3` UTR CG34340 +,Sfp24Ba - chr2L 3668153 intron,exon CG34340 +,Sfp24Ba - chr2L_6_3665001 chr2L_3665001 RAL-492 116 chr2L 3785588 3785615 chr2L 3786375 3786383 4 780 21.5 13.5 17.5 0.2 795 chr2L 3785588 3` UTR CG31960 + chr2L 3785986 exon CG31958 + chr2L 3786383 intergenic CG31958 + chr2L_4_3785001 chr2L_3785001 RAL-492 117 chr2L 3784704 3784721 chr2L 3786374 3786386 4 1653 30.0 13.5 21.8 0.2 1682 chr2L 3784704 intergenic CG31960 + chr2L 3785545 3` UTR CG31960 + chr2L 3786386 intergenic CG31958 + chr2L_4_3785001 chr2L_3785001 RAL-492 118 chr2L 3798058 3798095 chr2L 3803179 3803228 14 5125 43.0 27.0 35.0 0.4 5170 chr2L 3798058 exon CG3921 + chr2L 3800643 exon CG3921 + chr2L 3803228 intergenic Reph + chr2L_14_3800001 chr2L_3800001 RAL-492 119 chr2L 3889054 3889087 chr2L 3889163 3889196 11 109 3.0 3.5 3.2 2.6 142 chr2L 3889054 intron capu - chr2L 3889125 intron capu - chr2L 3889196 intron capu - chr2L_11_3885001 chr2L_3885001 RAL-492 120 chr2L 3897958 3898256 chr2L 3898165 3898361 7 168 5.5 4.0 4.8 1.2 403 chr2L 3897958 intron capu - chr2L 3898160 intron capu - chr2L 3898361 intron capu - chr2L_7_3895001 chr2L_3895001 RAL-492 121 chr2L 3898266 3898304 chr2L 3898371 3898402 4 102 0.0 7.5 3.8 0.8 136 chr2L 3898266 intron capu - chr2L 3898334 intron capu - chr2L 3898402 intron capu - chr2L_4_3895001 chr2L_3895001 RAL-492 122 chr2L 3943781 3943824 chr2L 3943887 3943935 11 110 1.0 0.5 0.8 6.1 154 chr2L 3943781 intron fred - chr2L 3943858 intron fred - chr2L 3943935 intron fred - chr2L_11_3940001 chr2L_3940001 RAL-492 123 chr2L 3963028 3963042 chr2L 3963470 3963485 4 443 5.0 4.0 4.5 0.7 457 chr2L 3963028 intron fred - chr2L 3963256 intron fred - chr2L 3963485 intron fred - chr2L_4_3960001 chr2L_3960001 RAL-492 124 chr2L 3985948 3985998 chr2L 3986045 3986096 12 97 3.0 2.5 2.8 3.2 148 chr2L 3985948 intron fred - chr2L 3986022 intron fred - chr2L 3986096 intron fred - chr2L_12_3985001 chr2L_3985001 RAL-492 125 chr2L 3987482 3987506 chr2L 3987559 3987602 6 87 3.5 1.5 2.5 1.7 120 chr2L 3987482 intron fred - chr2L 3987542 intron fred - chr2L 3987602 intron fred - chr2L_6_3985001 chr2L_3985001 RAL-492 126 chr2L 4008266 4008301 chr2L 4008355 4008377 6 97 3.5 3.5 3.5 1.3 111 chr2L 4008266 intergenic CG43773 +,CG43774 + chr2L 4008322 intergenic CG43774 +,CG43773 + chr2L 4008377 intergenic CG43774 +,CG43773 + chr2L_6_4005001 chr2L_4005001 RAL-492 127 chr2L 4059829 4059837 chr2L 4060041 4060080 7 239 0.5 6.0 3.2 1.7 251 chr2L 4059829 intron ed + chr2L 4059954 intron ed + chr2L 4060080 intron ed + chr2L_7_4055001 chr2L_4055001 RAL-492 128 chr2L 4060162 4060198 chr2L 4060244 4060292 10 93 3.5 2.0 2.8 2.6 130 chr2L 4060162 intron ed + chr2L 4060227 intron ed + chr2L 4060292 intron ed + chr2L_10_4060001 chr2L_4060001 RAL-492 129 chr2L 4072322 4072340 chr2L 4072432 4072450 4 108 0.0 0.5 0.2 3.3 128 chr2L 4072322 intron ed + chr2L 4072386 intron ed + chr2L 4072450 intron ed + chr2L_4_4070001 chr2L_4070001 RAL-492 130 chr2L 4124255 4124357 chr2L 4124355 4124470 8 116 0.0 0.0 0.0 8.0 215 chr2L 4124255 intergenic Sr-CI + chr2L 4124362 intergenic Sr-CI + chr2L 4124470 intergenic Sr-CI + chr2L_8_4120001 chr2L_4120001 RAL-492 131 chr2L 4152252 4152252 chr2L 16217660 16217660 5 12065408 12.0 23.5 17.8 0.3 12065408 chr2L 4152252 intergenic not near genes chr2L 10184956 exon Sur - chr2L 16217660 intergenic not near genes chr2L_5_10180001 chr2L_10180001 RAL-492 132 chr2L 4166355 4166411 chr2L 4166458 4166506 24 100 2.0 4.0 3.0 6.0 151 chr2L 4166355 intergenic Or24a - chr2L 4166430 intergenic Or24a - chr2L 4166506 intergenic Or24a - chr2L_24_4165001 chr2L_4165001 RAL-492 133 chr2L 4229611 4229644 chr2L 4229722 4229767 6 108 1.0 4.5 2.8 1.6 156 chr2L 4229611 intergenic CR44608 + chr2L 4229689 intergenic CR44608 + chr2L 4229767 intergenic CR44608 + chr2L_6_4225001 chr2L_4225001 RAL-492 134 chr2L 4233530 4233572 chr2L 4233631 4233638 12 95 3.0 2.5 2.8 3.2 108 chr2L 4233530 intergenic not near genes chr2L 4233584 intergenic not near genes chr2L 4233638 intergenic not near genes chr2L_12_4230001 chr2L_4230001 RAL-492 135 chr2L 4293906 4293922 chr2L 4294018 4294032 6 110 9.5 4.5 7.0 0.8 126 chr2L 4293906 intron tutl + chr2L 4293969 intron tutl + chr2L 4294032 intron tutl + chr2L_6_4290001 chr2L_4290001 RAL-492 136 chr2L 4317876 4317909 chr2L 4317959 4317991 14 94 7.5 2.5 5.0 2.3 115 chr2L 4317876 intron tutl + chr2L 4317934 intron tutl + chr2L 4317991 intron tutl + chr2L_14_4315001 chr2L_4315001 RAL-492 137 chr2L 4340697 4340705 chr2L 4340795 4340795 4 100 7.0 3.5 5.2 0.6 98 chr2L 4340697 intron Atet + chr2L 4340746 intron Atet + chr2L 4340795 intron Atet + chr2L_4_4340001 chr2L_4340001 RAL-492 138 chr2L 4340707 4340740 chr2L 4340794 4340800 14 95 6.0 3.5 4.8 2.4 93 chr2L 4340707 intron Atet + chr2L 4340754 intron Atet + chr2L 4340800 intron Atet + chr2L_14_4340001 chr2L_4340001 RAL-492 139 chr2L 4438997 4439031 chr2L 4439090 4439094 14 96 3.0 2.0 2.5 4.0 97 chr2L 4438997 intron CG15431 - chr2L 4439046 intron CG15431 - chr2L 4439094 intron CG15431 - chr2L_14_4435001 chr2L_4435001 RAL-492 140 chr2L 4477133 4477148 chr2L 4477306 4477355 15 184 26.5 21.0 23.8 0.6 222 chr2L 4477133 intergenic ine -,dp - chr2L 4477244 intergenic dp -,ine - chr2L 4477355 intergenic dp -,ine - chr2L_15_4475001 chr2L_4475001 RAL-492 141 chr2L 4595852 4595867 chr2L 4595962 4595976 4 110 2.0 0.0 1.0 2.0 124 chr2L 4595852 intron dp - chr2L 4595914 intron dp - chr2L 4595976 intron dp - chr2L_4_4595001 chr2L_4595001 RAL-492 142 chr2L 4601698 4601735 chr2L 4609143 4609196 mdg1 22 7458 5.0 4.0 4.5 4.0 7498 chr2L 4601698 intron dp - chr2L 4605447 intron dp - chr2L 4609196 intron dp - chr2L_22_4605001 chr2L_4605001 RAL-492 143 chr2L 4622040 4622066 chr2L 4622142 4622168 4 102 3.5 0.5 2.0 1.3 128 chr2L 4622040 intergenic not near genes chr2L 4622104 intergenic not near genes chr2L 4622168 intergenic not near genes chr2L_4_4620001 chr2L_4620001 RAL-492 144 chr2L 4693392 4693416 chr2L 4693578 4693603 6 186 4.5 4.0 4.2 1.2 211 chr2L 4693392 intergenic not near genes chr2L 4693498 intergenic not near genes chr2L 4693603 intergenic not near genes chr2L_6_4690001 chr2L_4690001 RAL-492 145 chr2L 4770107 4770138 chr2L 4770193 4770241 12 97 3.0 3.0 3.0 3.0 134 chr2L 4770107 intron CG15630 - chr2L 4770174 intron CG15630 - chr2L 4770241 intron CG15630 - chr2L_12_4770001 chr2L_4770001 RAL-492 146 chr2L 4777077 4777104 chr2L 4777179 4777206 9 100 5.5 1.5 3.5 2.0 129 chr2L 4777077 intron CG15630 - chr2L 4777142 intron CG15630 - chr2L 4777206 intron CG15630 - chr2L_9_4775001 chr2L_4775001 RAL-492 147 chr2L 4809647 4809693 chr2L 4809744 4809791 8 97 3.0 3.5 3.2 1.9 144 chr2L 4809647 intergenic not near genes chr2L 4809719 intergenic not near genes chr2L 4809791 intergenic not near genes chr2L_8_4805001 chr2L_4805001 RAL-492 148 chr2L 4819494 4819512 chr2L 4819637 4819655 6 143 3.0 8.5 5.8 0.9 161 chr2L 4819494 intergenic not near genes chr2L 4819574 intergenic not near genes chr2L 4819655 intergenic not near genes chr2L_6_4815001 chr2L_4815001 RAL-492 149 chr2L 4841066 4841104 chr2L 4841145 4841197 17 89 6.5 5.5 6.0 2.4 131 chr2L 4841066 intron CG12194 + chr2L 4841132 intron CG12194 + chr2L 4841197 3` UTR CG12194 + chr2L_17_4840001 chr2L_4840001 RAL-492 150 chr2L 4858441 4858472 chr2L 4858560 4858591 9 119 1.5 0.0 0.8 5.0 150 chr2L 4858441 intron pog + chr2L 4858516 intron pog + chr2L 4858591 intron pog + chr2L_9_4855001 chr2L_4855001 RAL-492 151 chr2L 4996075 4996116 chr2L 4996168 4996213 12 96 2.5 3.0 2.8 3.2 138 chr2L 4996075 intron Rtnl1 - chr2L 4996144 intron Rtnl1 - chr2L 4996213 intron Rtnl1 - chr2L_12_4995001 chr2L_4995001 RAL-492 152 chr2L 4998096 4998145 chr2L 4998226 4998248 19 124 7.5 6.5 7.0 2.4 152 chr2L 4998096 intron Rtnl1 - chr2L 4998172 intron Rtnl1 - chr2L 4998248 intron Rtnl1 - chr2L_19_4995001 chr2L_4995001 RAL-492 153 chr2L 5057559 5057599 chr2L 5057920 5057962 10 360 5.5 8.0 6.8 1.3 403 chr2L 5057559 exon CG31918 - chr2L 5057760 exon CG31918 - chr2L 5057962 exon CG31918 - chr2L_10_5055001 chr2L_5055001 RAL-492 154 chr2L 5088502 5088537 chr2L 5088601 5088608 7 89 10.0 0.0 5.0 1.2 106 chr2L 5088502 intron pgant5 - chr2L 5088555 intron pgant5 - chr2L 5088608 intron pgant5 - chr2L_7_5085001 chr2L_5085001 RAL-492 155 chr2L 5247421 5247450 chr2L 5247526 5247541 4 100 1.0 3.0 2.0 1.3 120 chr2L 5247421 intron tkv - chr2L 5247481 intron tkv - chr2L 5247541 intron tkv - chr2L_4_5245001 chr2L_5245001 RAL-492 156 chr2L 5276705 5276717 chr2L 5276809 5276821 4 104 1.0 6.0 3.5 0.9 116 chr2L 5276705 exon Bsg25D - chr2L 5276763 intron Bsg25D - chr2L 5276821 intron Bsg25D - chr2L_4_5275001 chr2L_5275001 RAL-492 157 chr2L 5276718 5276734 chr2L 5276803 5276838 4 99 0.5 6.0 3.2 1.0 120 chr2L 5276718 exon Bsg25D - chr2L 5276778 intron Bsg25D - chr2L 5276838 intron Bsg25D - chr2L_4_5275001 chr2L_5275001 RAL-492 158 chr2L 5339025 5339070 chr2L 5339129 5339173 5 103 2.0 0.0 1.0 2.5 148 chr2L 5339025 intergenic CG12512 - chr2L 5339099 intergenic CG12512 - chr2L 5339173 3` UTR CG12512 - chr2L_5_5335001 chr2L_5335001 RAL-492 159 chr2L 5433836 5433854 chr2L 5433953 5433971 4 117 2.5 7.5 5.0 0.7 135 chr2L 5433836 3` UTR CR43715 - chr2L 5433904 3` UTR CR43715 - chr2L 5433971 3` UTR CR43715 - chr2L_4_5430001 chr2L_5430001 RAL-492 160 chr2L 5455666 5455708 chr2L 5455765 5455796 8 95 4.5 5.5 5.0 1.3 130 chr2L 5455666 intergenic not near genes chr2L 5455731 intergenic not near genes chr2L 5455796 intergenic not near genes chr2L_8_5455001 chr2L_5455001 RAL-492 161 chr2L 5475143 5475161 chr2L 5475260 5475284 4 122 6.5 3.5 5.0 0.7 141 chr2L 5475143 intergenic not near genes chr2L 5475214 intergenic not near genes chr2L 5475284 intergenic not near genes chr2L_4_5475001 chr2L_5475001 RAL-492 162 chr2L 5500040 5500081 chr2L 5500146 5500165 11 102 2.5 5.0 3.8 2.3 125 chr2L 5500040 intergenic not near genes chr2L 5500102 intergenic not near genes chr2L 5500165 intergenic not near genes chr2L_11_5500001 chr2L_5500001 RAL-492 163 chr2L 5511303 5511356 chr2L 5511406 5511459 21 103 3.5 1.5 2.5 6.0 156 chr2L 5511303 intergenic not near genes chr2L 5511381 intergenic not near genes chr2L 5511459 intergenic not near genes chr2L_21_5510001 chr2L_5510001 RAL-492 164 chr2L 5582313 5582347 chr2L 5582423 5582453 11 108 3.5 2.5 3.0 2.8 140 chr2L 5582313 intergenic not near genes chr2L 5582383 intergenic not near genes chr2L 5582453 intergenic not near genes chr2L_11_5580001 chr2L_5580001 RAL-492 165 chr2L 5594305 5594352 chr2L 5594417 5594464 15 112 2.5 4.0 3.2 3.6 159 chr2L 5594305 intergenic not near genes chr2L 5594384 intergenic not near genes chr2L 5594464 intergenic not near genes chr2L_15_5590001 chr2L_5590001 RAL-492 166 chr2L 5666273 5666306 chr2L 5666381 5666416 4 109 7.5 2.0 4.8 0.7 143 chr2L 5666273 intron Hsp60C + chr2L 5666344 intron Hsp60C + chr2L 5666416 intron Hsp60C + chr2L_4_5665001 chr2L_5665001 RAL-492 167 chr2L 5668595 5668614 chr2L 5668691 5668692 11 96 2.0 7.5 4.8 1.9 97 chr2L 5668595 intron Hsp60C + chr2L 5668644 intron Hsp60C + chr2L 5668692 intron Hsp60C + chr2L_11_5665001 chr2L_5665001 RAL-492 168 chr2L 5784942 5784980 chr2L 5785038 5785083 7 101 2.0 3.5 2.8 1.8 141 chr2L 5784942 intron CG9171 - chr2L 5785012 intron CG9171 - chr2L 5785083 intron CG9171 - chr2L_7_5785001 chr2L_5785001 RAL-492 169 chr2L 5827696 5827708 chr2L 5836724 5836734 roo 4 9027 6.0 3.0 4.5 0.7 9038 chr2L 5827696 intron TrissinR + chr2L 5832215 intron TrissinR + chr2L 5836734 intron TrissinR + chr2L_4_5830001 chr2L_5830001 RAL-492 170 chr2L 5827718 5827741 chr2L 5836714 5836759 roo 6 9020 3.0 3.0 3.0 1.5 9041 chr2L 5827718 intron TrissinR + chr2L 5832238 intron TrissinR + chr2L 5836759 intron TrissinR + chr2L_6_5830001 chr2L_5830001 RAL-492 171 chr2L 5839071 5839122 chr2L 5839171 5839182 17 93 3.5 4.0 3.8 3.5 111 chr2L 5839071 intron TrissinR + chr2L 5839126 intron TrissinR + chr2L 5839182 intron TrissinR + chr2L_17_5835001 chr2L_5835001 RAL-492 172 chr2L 5976921 5976966 chr2L 5977027 5977072 6 106 3.5 1.0 2.2 1.9 151 chr2L 5976921 intron chic - chr2L 5976996 intron chic - chr2L 5977072 intron chic - chr2L_6_5975001 chr2L_5975001 RAL-492 173 chr2L 5989014 5989059 chr2L 5989109 5989149 13 94 7.0 0.5 3.8 2.7 135 chr2L 5989014 intergenic ifc +,lid - chr2L 5989082 intergenic ifc +,lid - chr2L 5989149 intergenic lid -,ifc + chr2L_13_5985001 chr2L_5985001 RAL-492 174 chr2L 6011344 6011382 chr2L 6011504 6011542 13 159 4.5 8.0 6.2 1.8 198 chr2L 6011344 intron CG9098 - chr2L 6011443 intron CG9098 - chr2L 6011542 intron CG9098 - chr2L_13_6010001 chr2L_6010001 RAL-492 175 chr2L 6070904 6070911 chr2L 6070991 6071005 4 92 0.5 5.5 3.0 1.0 101 chr2L 6070904 intergenic Kr-h2 +,CG9154 - chr2L 6070954 intergenic Kr-h2 +,CG9154 - chr2L 6071005 5` UTR Kr-h2 + chr2L_4_6070001 chr2L_6070001 RAL-492 176 chr2L 6070912 6070923 chr2L 6070986 6071031 4 98 0.5 5.5 3.0 1.0 119 chr2L 6070912 intergenic Kr-h2 +,CG9154 - chr2L 6070972 intergenic Kr-h2 +,CG9154 - chr2L 6071031 5` UTR Kr-h2 + chr2L_4_6070001 chr2L_6070001 RAL-492 177 chr2L 6074412 6074448 chr2L 6074559 6074578 8 146 5.5 10.0 7.8 0.9 166 chr2L 6074412 3` UTR CR43801 - chr2L 6074495 3` UTR CR43801 - chr2L 6074578 3` UTR CR43801 - chr2L_8_6070001 chr2L_6070001 RAL-492 178 chr2L 6093689 6093720 chr2L 6093775 6093793 10 86 1.5 2.5 2.0 3.3 104 chr2L 6093689 exon,3` UTR Kr-h1 +,CG45075 + chr2L 6093741 intron,intron Kr-h1 +,CG45075 + chr2L 6093793 exon,3` UTR Kr-h1 +,CG45075 + chr2L_10_6090001 chr2L_6090001 RAL-492 179 chr2L 6103202 6103246 chr2L 6103299 6103338 13 86 3.0 4.5 3.8 2.7 136 chr2L 6103202 intron stai + chr2L 6103270 intron stai + chr2L 6103338 intron stai + chr2L_13_6100001 chr2L_6100001 RAL-492 180 chr2L 6106233 6106241 chr2L 6106336 6106344 4 103 1.5 3.0 2.2 1.2 111 chr2L 6106233 intron stai + chr2L 6106288 intron stai + chr2L 6106344 intron stai + chr2L_4_6105001 chr2L_6105001 RAL-492 181 chr2L 6173848 6173879 chr2L 6173944 6173975 7 96 2.5 4.0 3.2 1.7 127 chr2L 6173848 intergenic not near genes chr2L 6173912 intergenic not near genes chr2L 6173975 intergenic not near genes chr2L_7_6170001 chr2L_6170001 RAL-492 182 chr2L 6261981 6261993 chr2L 6262042 6262089 8 84 8.0 4.5 6.2 1.1 108 chr2L 6261981 intron Ddr + chr2L 6262035 intron Ddr + chr2L 6262089 intron Ddr + chr2L_8_6260001 chr2L_6260001 RAL-492 183 chr2L 6286370 6286417 chr2L 6286485 6286531 9 112 3.5 4.5 4.0 1.8 161 chr2L 6286370 intron Ddr + chr2L 6286450 intron Ddr + chr2L 6286531 intron Ddr + chr2L_9_6285001 chr2L_6285001 RAL-492 184 chr2L 6300543 6300594 chr2L 6300644 6300688 8 98 3.5 5.5 4.5 1.5 145 chr2L 6300543 intron Ddr + chr2L 6300616 intron Ddr + chr2L 6300688 intron Ddr + chr2L_8_6300001 chr2L_6300001 RAL-492 185 chr2L 6349065 6349072 chr2L 6349158 6349170 5 97 2.5 0.0 1.2 2.3 105 chr2L 6349065 intergenic CG9498 - chr2L 6349118 intergenic CG9498 - chr2L 6349170 intergenic CG9498 - chr2L_5_6345001 chr2L_6345001 RAL-492 186 chr2L 6363136 6363172 chr2L 6366081 6366117 Burdock 14 2943 6.0 2.0 4.0 2.8 2981 chr2L 6363136 intergenic not near genes chr2L 6364626 intergenic not near genes chr2L 6366117 intergenic not near genes chr2L_14_6360001 chr2L_6360001 RAL-492 187 chr2L 6414726 6414762 chr2L 6414826 6414860 6 98 0.5 2.5 1.5 2.4 134 chr2L 6414726 3` UTR CG13982 + chr2L 6414793 3` UTR CG13982 + chr2L 6414860 3` UTR CG13982 + chr2L_6_6410001 chr2L_6410001 RAL-492 188 chr2L 6426845 6426880 chr2L 6445124 6445160 roo 17 18278 3.5 6.5 5.0 2.8 18315 chr2L 6426845 3` UTR CG9527 - chr2L 6436002 intron CG9527 - chr2L 6445160 exon CG9527 - chr2L_17_6435001 chr2L_6435001 RAL-492 189 chr2L 6564833 6564881 chr2L 6564945 6564989 4 111 1.0 1.5 1.2 1.8 156 chr2L 6564833 3` UTR CG13766 - chr2L 6564911 3` UTR CG13766 - chr2L 6564989 3` UTR CG13766 - chr2L_4_6560001 chr2L_6560001 RAL-492 190 chr2L 6590003 6590124 chr2L 6590113 6590210 6 82 0.0 0.0 0.0 6.0 207 chr2L 6590003 intron CG11319 - chr2L 6590106 intron CG11319 - chr2L 6590210 intron CG11319 - chr2L_6_6590001 chr2L_6590001 RAL-492 191 chr2L 6677647 6677679 chr2L 6677742 6677781 12 101 3.0 2.0 2.5 3.4 134 chr2L 6677647 intergenic CG11329 -,Nhe3 - chr2L 6677714 intergenic CG11329 -,Nhe3 - chr2L 6677781 intergenic Nhe3 -,CG11329 - chr2L_12_6675001 chr2L_6675001 RAL-492 192 chr2L 6694610 6694655 chr2L 6694706 6694748 9 92 3.5 4.5 4.0 1.8 138 chr2L 6694610 intron Tsp - chr2L 6694679 intron Tsp - chr2L 6694748 intron Tsp - chr2L_9_6690001 chr2L_6690001 RAL-492 193 chr2L 6702510 6702530 chr2L 6702615 6702633 7 105 4.0 5.0 4.5 1.3 123 chr2L 6702510 intron Tsp - chr2L 6702572 intron Tsp - chr2L 6702633 intron Tsp - chr2L_7_6700001 chr2L_6700001 RAL-492 194 chr2L 6746077 6746113 chr2L 6746173 6746209 15 96 5.0 3.0 4.0 3.0 132 chr2L 6746077 intron CG11221 + chr2L 6746143 intron CG11221 + chr2L 6746209 intron CG11221 + chr2L_15_6745001 chr2L_6745001 RAL-492 195 chr2L 6850379 6850426 chr2L 6850505 6850551 9 125 3.0 3.0 3.0 2.2 172 chr2L 6850379 intergenic not near genes chr2L 6850465 intergenic not near genes chr2L 6850551 intergenic not near genes chr2L_9_6850001 chr2L_6850001 RAL-492 196 chr2L 6876784 6876809 chr2L 6882969 6882988 diver 5 6194 7.5 5.0 6.2 0.7 6204 chr2L 6876784 intron Nlg2 + chr2L 6879886 intron Nlg2 + chr2L 6882988 intron Nlg2 + chr2L_5_6875001 chr2L_6875001 RAL-492 197 chr2L 6900729 6900762 chr2L 6900843 6900874 5 112 4.0 1.5 2.8 1.3 145 chr2L 6900729 intron Nlg2 + chr2L 6900802 intron Nlg2 + chr2L 6900874 intron Nlg2 + chr2L_5_6900001 chr2L_6900001 RAL-492 198 chr2L 6933921 6933932 chr2L 6934020 6934031 5 99 6.5 3.5 5.0 0.8 110 chr2L 6933921 exon CG18304 - chr2L 6933976 intron CG18304 - chr2L 6934031 intron CG18304 - chr2L_5_6930001 chr2L_6930001 RAL-492 199 chr2L 7051145 7051165 chr2L 7051229 7051235 4 86 0.0 0.5 0.2 3.3 90 chr2L 7051145 intron milt + chr2L 7051190 intron milt + chr2L 7051235 intron milt + chr2L_4_7050001 chr2L_7050001 RAL-492 200 chr2L 7125769 7125812 chr2L 7125905 7125944 5 135 4.0 2.0 3.0 1.2 175 chr2L 7125769 intron Pvf3 - chr2L 7125856 intron Pvf3 - chr2L 7125944 intron Pvf3 - chr2L_5_7125001 chr2L_7125001 RAL-492 201 chr2L 7143146 7143183 chr2L 7143247 7143284 9 101 1.5 2.0 1.8 3.2 138 chr2L 7143146 intron,5` UTR Pvf3 -,CR44612 + chr2L 7143215 intron,5` UTR Pvf3 -,CR44612 + chr2L 7143284 intron,5` UTR Pvf3 -,CR44612 + chr2L_9_7140001 chr2L_7140001 RAL-492 202 chr2L 7152188 7152200 chr2L 7152278 7152298 8 98 6.5 1.5 4.0 1.6 110 chr2L 7152188 intron Pvf3 - chr2L 7152243 intron Pvf3 - chr2L 7152298 intron Pvf3 - chr2L_8_7150001 chr2L_7150001 RAL-492 203 chr2L 7164549 7164589 chr2L 7164687 7164726 15 137 2.0 6.5 4.2 2.9 177 chr2L 7164549 intergenic not near genes chr2L 7164638 intergenic not near genes chr2L 7164726 intergenic not near genes chr2L_15_7160001 chr2L_7160001 RAL-492 204 chr2L 7330369 7330414 chr2L 7330466 7330512 11 97 1.5 5.0 3.2 2.6 143 chr2L 7330369 intergenic not near genes chr2L 7330440 intergenic not near genes chr2L 7330512 intergenic not near genes chr2L_11_7330001 chr2L_7330001 RAL-492 205 chr2L 7334172 7334203 chr2L 7334322 7334355 7 153 3.5 2.0 2.8 1.8 183 chr2L 7334172 5` UTR Wnt6 + chr2L 7334264 5` UTR Wnt6 + chr2L 7334355 5` UTR Wnt6 + chr2L_7_7330001 chr2L_7330001 RAL-492 206 chr2L 7335183 7335210 chr2L 7335300 7335327 8 117 4.0 1.5 2.8 2.1 144 chr2L 7335183 intron Wnt6 + chr2L 7335255 intron Wnt6 + chr2L 7335327 intron Wnt6 + chr2L_8_7335001 chr2L_7335001 RAL-492 207 chr2L 7343306 7343356 chr2L 7350441 7350492 roo 15 7128 4.5 4.5 4.5 2.7 7186 chr2L 7343306 intron Wnt6 + chr2L 7346899 intron Wnt6 + chr2L 7350492 intron Wnt6 + chr2L_15_7345001 chr2L_7345001 RAL-492 208 chr2L 7363501 7363553 chr2L 7363599 7363651 10 98 1.0 0.5 0.8 5.6 150 chr2L 7363501 5` UTR Wnt10 + chr2L 7363576 5` UTR Wnt10 + chr2L 7363651 5` UTR Wnt10 + chr2L_10_7360001 chr2L_7360001 RAL-492 209 chr2L 7374539 7374544 chr2L 7374643 7374648 4 104 0.0 6.5 3.2 1.0 109 chr2L 7374539 intron Wnt10 + chr2L 7374594 intron Wnt10 + chr2L 7374648 intron Wnt10 + chr2L_4_7370001 chr2L_7370001 RAL-492 210 chr2L 7377890 7377902 chr2L 7378007 7378019 4 117 0.0 4.5 2.2 1.2 129 chr2L 7377890 intron ninaC + chr2L 7377954 intron ninaC + chr2L 7378019 intron ninaC + chr2L_4_7375001 chr2L_7375001 RAL-492 211 chr2L 7399288 7399331 chr2L 7399678 7399724 11 388 0.0 6.0 3.0 2.8 436 chr2L 7399288 intergenic not near genes chr2L 7399506 intergenic not near genes chr2L 7399724 intergenic not near genes chr2L_11_7395001 chr2L_7395001 RAL-492 212 chr2L 7436198 7436221 chr2L 7436309 7436327 6 112 3.0 5.5 4.2 1.2 129 chr2L 7436198 intergenic not near genes chr2L 7436262 intergenic not near genes chr2L 7436327 intergenic not near genes chr2L_6_7435001 chr2L_7435001 RAL-492 213 chr2L 7493884 7493919 chr2L 7494012 7494040 11 124 3.5 6.5 5.0 1.8 156 chr2L 7493884 intron Ziz - chr2L 7493962 intron Ziz - chr2L 7494040 intron Ziz - chr2L_11_7490001 chr2L_7490001 RAL-492 214 chr2L 7513736 7513781 chr2L 7513849 7513893 14 112 3.5 2.0 2.8 3.7 157 chr2L 7513736 intron RapGAP1 - chr2L 7513814 intron RapGAP1 - chr2L 7513893 intron RapGAP1 - chr2L_14_7510001 chr2L_7510001 RAL-492 215 chr2L 7579184 7579208 chr2L 7579395 7579419 BS 5 211 2.5 0.0 1.2 2.3 235 chr2L 7579184 intergenic RapGAP1 - chr2L 7579302 intergenic RapGAP1 - chr2L 7579419 intergenic RapGAP1 - chr2L_5_7575001 chr2L_7575001 RAL-492 216 chr2L 7579882 7579917 chr2L 7579974 7580019 8 100 3.0 3.0 3.0 2.0 137 chr2L 7579882 intergenic not near genes chr2L 7579950 intergenic not near genes chr2L 7580019 intergenic not near genes chr2L_8_7575001 chr2L_7575001 RAL-492 217 chr2L 7640400 7640423 chr2L 7640501 7640524 10 99 5.0 1.5 3.2 2.4 124 chr2L 7640400 intergenic not near genes chr2L 7640462 intergenic not near genes chr2L 7640524 intergenic not near genes chr2L_10_7640001 chr2L_7640001 RAL-492 218 chr2L 7653026 7653053 chr2L 7653140 7653166 9 112 6.0 0.0 3.0 2.2 140 chr2L 7653026 intron Slob - chr2L 7653096 intron Slob - chr2L 7653166 intron Slob - chr2L_9_7650001 chr2L_7650001 RAL-492 219 chr2L 7701679 7701701 chr2L 7701769 7701804 4 100 1.0 5.5 3.2 1.0 125 chr2L 7701679 intergenic Tep2 - chr2L 7701742 intergenic Tep2 - chr2L 7701804 intergenic Tep2 - chr2L_4_7700001 chr2L_7700001 RAL-492 220 chr2L 7702533 7702569 chr2L 7702638 7702681 12 109 1.0 5.5 3.2 2.9 148 chr2L 7702533 intergenic Tep3 + chr2L 7702607 intergenic Tep3 + chr2L 7702681 intergenic Tep3 + chr2L_12_7700001 chr2L_7700001 RAL-492 221 chr2L 7769787 7769836 chr2L 7769885 7769935 9 96 2.0 1.0 1.5 3.6 148 chr2L 7769787 intron CG7191 + chr2L 7769861 intron CG7191 + chr2L 7769935 intron CG7191 + chr2L_9_7765001 chr2L_7765001 RAL-492 222 chr2L 7798823 7798869 chr2L 7798993 7799039 12 167 5.5 2.5 4.0 2.4 216 chr2L 7798823 intron Herp - chr2L 7798931 intron Herp - chr2L 7799039 intron Herp - chr2L_12_7795001 chr2L_7795001 RAL-492 223 chr2L 7922721 7922774 chr2L 7922822 7922875 17 100 5.5 8.0 6.8 2.2 154 chr2L 7922721 intron Snoo - chr2L 7922798 intron Snoo - chr2L 7922875 intron Snoo - chr2L_17_7920001 chr2L_7920001 RAL-492 224 chr2L 7959024 7959073 chr2L 7960454 7960504 pogo 11 1426 6.0 4.5 5.2 1.8 1480 chr2L 7959024 intron Snoo - chr2L 7959764 intron Snoo - chr2L 7960504 intron Snoo - chr2L_11_7955001 chr2L_7955001 RAL-492 225 chr2L 8003033 8003062 chr2L 8003134 8003162 9 100 0.5 1.5 1.0 4.5 129 chr2L 8003033 intron Wwox - chr2L 8003098 intron Wwox - chr2L 8003162 intron Wwox - chr2L_9_8000001 chr2L_8000001 RAL-492 226 chr2L 8044087 8044121 chr2L 8044185 8044215 10 97 2.5 3.0 2.8 2.6 128 chr2L 8044087 intron CG7466 + chr2L 8044151 intron CG7466 + chr2L 8044215 intron CG7466 + chr2L_10_8040001 chr2L_8040001 RAL-492 227 chr2L 8089702 8089711 chr2L 8105711 8105739 7 16024 22.5 19.0 20.8 0.3 16037 chr2L 8089702 exon Bsg + chr2L 8097720 intron Bsg + chr2L 8105739 exon Bsg + chr2L_7_8095001 chr2L_8095001 RAL-492 228 chr2L 8105758 8105789 chr2L 8106843 8106879 7 1094 16.0 21.5 18.8 0.4 1121 chr2L 8105758 exon Bsg + chr2L 8106318 intron Bsg + chr2L 8106879 exon Bsg + chr2L_7_8105001 chr2L_8105001 RAL-492 229 chr2L 8106929 8107131 chr2L 8107067 8107267 10 131 30.0 27.0 28.5 0.3 338 chr2L 8106929 exon Bsg + chr2L 8107098 exon Bsg + chr2L 8107267 exon Bsg + chr2L_10_8105001 chr2L_8105001 RAL-492 230 chr2L 8107398 8107418 chr2L 8107746 8107781 10 364 24.5 17.5 21.0 0.5 383 chr2L 8107398 exon Bsg + chr2L 8107590 intron Bsg + chr2L 8107781 exon Bsg + chr2L_10_8105001 chr2L_8105001 RAL-492 231 chr2L 8120538 8120561 chr2L 8120643 8120657 13 104 7.5 3.0 5.2 2.1 119 chr2L 8120538 exon mon2 - chr2L 8120598 intron mon2 - chr2L 8120657 intron mon2 - chr2L_13_8120001 chr2L_8120001 RAL-492 232 chr2L 8127168 8127201 chr2L 8130187 8130221 9 3023 39.5 28.5 34.0 0.3 3053 chr2L 8127168 5` UTR CG8668 + chr2L 8128694 intron CG8668 + chr2L 8130221 intron CG8668 + chr2L_9_8125001 chr2L_8125001 RAL-492 233 chr2L 8141917 8141964 chr2L 8142020 8142066 13 100 4.5 1.0 2.8 3.4 149 chr2L 8141917 intron CG8552 - chr2L 8141992 intron CG8552 - chr2L 8142066 intron CG8552 - chr2L_13_8140001 chr2L_8140001 RAL-492 234 chr2L 8167708 8167733 chr2L 8167799 8167831 12 97 5.5 5.0 5.2 1.9 123 chr2L 8167708 intron Piezo + chr2L 8167770 intron Piezo + chr2L 8167831 intron Piezo + chr2L_12_8165001 chr2L_8165001 RAL-492 235 chr2L 8171284 8171300 chr2L 8171384 8171401 7 101 0.0 5.0 2.5 2.0 117 chr2L 8171284 intron Piezo + chr2L 8171342 intron Piezo + chr2L 8171401 intron Piezo + chr2L_7_8170001 chr2L_8170001 RAL-492 236 chr2L 8271621 8271653 chr2L 8271717 8271740 4 94 1.0 2.0 1.5 1.6 119 chr2L 8271621 intron Btk29A - chr2L 8271680 intron Btk29A - chr2L 8271740 intron Btk29A - chr2L_4_8270001 chr2L_8270001 RAL-492 237 chr2L 8284999 8285035 chr2L 8285095 8285131 7 96 4.0 2.5 3.2 1.7 132 chr2L 8284999 intron Btk29A - chr2L 8285065 intron Btk29A - chr2L 8285131 intron Btk29A - chr2L_7_8285001 chr2L_8285001 RAL-492 238 chr2L 8286281 8286328 chr2L 8286388 8286433 9 96 3.5 5.5 4.5 1.6 152 chr2L 8286281 intron Btk29A - chr2L 8286357 intron Btk29A - chr2L 8286433 intron Btk29A - chr2L_9_8285001 chr2L_8285001 RAL-492 239 chr2L 8351546 8351576 chr2L 8351643 8351669 4 96 0.0 2.0 1.0 2.0 123 chr2L 8351546 intergenic CG7778 + chr2L 8351608 intergenic CG7778 + chr2L 8351669 intergenic not near genes chr2L_4_8350001 chr2L_8350001 RAL-492 240 chr2L 8411771 8411810 chr2L 8411942 8411982 5 172 2.0 2.5 2.2 1.6 211 chr2L 8411771 5` UTR CG13397 - chr2L 8411876 intergenic CG13397 -,CG13398 - chr2L 8411982 intergenic CG13397 -,CG13398 - chr2L_5_8410001 chr2L_8410001 RAL-492 241 chr2L 8412869 8412922 chr2L 8412976 8413028 8 106 3.5 4.5 4.0 1.6 159 chr2L 8412869 3` UTR CG13398 - chr2L 8412948 3` UTR CG13398 - chr2L 8413028 3` UTR CG13398 - chr2L_8_8410001 chr2L_8410001 RAL-492 242 chr2L 8452404 8452410 chr2L 8461594 8461600 roo 4 9190 6.5 5.5 6.0 0.6 9196 chr2L 8452404 intron fu12 - chr2L 8457002 intron fu12 - chr2L 8461600 intron fu12 - chr2L_4_8455001 chr2L_8455001 RAL-492 243 chr2L 8452411 8452446 chr2L 8461590 8461629 roo 12 9189 5.0 3.5 4.2 2.3 9218 chr2L 8452411 intron fu12 - chr2L 8457020 intron fu12 - chr2L 8461629 intron fu12 - chr2L_12_8455001 chr2L_8455001 RAL-492 244 chr2L 8477240 8477267 chr2L 8477696 8477712 12 453 3.0 6.0 4.5 2.2 472 chr2L 8477240 intron d + chr2L 8477476 intron,exon d +,CheA29a + chr2L 8477712 intron,exon d +,CheA29a + chr2L_12_8475001 chr2L_8475001 RAL-492 245 chr2L 8498185 8498238 chr2L 8498286 8498339 13 101 3.0 8.0 5.5 2.0 154 chr2L 8498185 intron Dh31 - chr2L 8498262 intron Dh31 - chr2L 8498339 intron Dh31 - chr2L_13_8495001 chr2L_8495001 RAL-492 246 chr2L 8503588 8503621 chr2L 8503690 8503724 9 103 4.5 2.5 3.5 2.0 136 chr2L 8503588 intron Dh31 - chr2L 8503656 intron Dh31 - chr2L 8503724 intron Dh31 - chr2L_9_8500001 chr2L_8500001 RAL-492 247 chr2L 8510116 8510169 chr2L 8510224 8510277 5 105 1.5 0.5 1.0 2.5 161 chr2L 8510116 exon CG13096 - chr2L 8510196 intron CG13096 - chr2L 8510277 intron CG13096 - chr2L_5_8510001 chr2L_8510001 RAL-492 248 chr2L 8534778 8534830 chr2L 8534891 8534944 21 110 8.0 1.5 4.8 3.6 166 chr2L 8534778 intron CG17834 + chr2L 8534861 intron CG17834 + chr2L 8534944 intron CG17834 + chr2L_21_8530001 chr2L_8530001 RAL-492 249 chr2L 8554344 8554359 chr2L 8554460 8554475 5 116 6.5 5.5 6.0 0.7 131 chr2L 8554344 intron Sema-1a + chr2L 8554410 intron Sema-1a + chr2L 8554475 intron Sema-1a + chr2L_5_8550001 chr2L_8550001 RAL-492 250 chr2L 8554360 8554377 chr2L 8554459 8554493 12 114 3.5 5.5 4.5 2.2 133 chr2L 8554360 intron Sema-1a + chr2L 8554426 intron Sema-1a + chr2L 8554493 intron Sema-1a + chr2L_12_8550001 chr2L_8550001 RAL-492 251 chr2L 8591170 8591184 chr2L 8591304 8591315 4 133 1.5 3.0 2.2 1.2 145 chr2L 8591170 intron,intron Sema-1a +,CR43855 - chr2L 8591242 intron,intron Sema-1a +,CR43855 - chr2L 8591315 intron,intron Sema-1a +,CR43855 - chr2L_4_8590001 chr2L_8590001 RAL-492 252 chr2L 8591919 8591952 chr2L 8592032 8592067 9 114 3.0 3.5 3.2 2.1 148 chr2L 8591919 intron,intron Sema-1a +,CR43855 - chr2L 8591993 intron,intron Sema-1a +,CR43855 - chr2L 8592067 intron,intron Sema-1a +,CR43855 - chr2L_9_8590001 chr2L_8590001 RAL-492 253 chr2L 8612835 8612868 chr2L 8612931 8612965 8 94 3.5 5.0 4.2 1.5 130 chr2L 8612835 intron Sema-1a + chr2L 8612900 intron Sema-1a + chr2L 8612965 intron Sema-1a + chr2L_8_8610001 chr2L_8610001 RAL-492 254 chr2L 8635243 8635294 chr2L 8635344 8635363 5 87 8.5 5.0 6.8 0.6 120 chr2L 8635243 intron Sema-1a + chr2L 8635303 intron Sema-1a + chr2L 8635363 intron Sema-1a + chr2L_5_8635001 chr2L_8635001 RAL-492 255 chr2L 8649909 8649961 chr2L 8650017 8650065 6 107 2.0 4.0 3.0 1.5 156 chr2L 8649909 intron Sema-1a + chr2L 8649987 intron Sema-1a + chr2L 8650065 intron Sema-1a + chr2L_6_8645001 chr2L_8645001 RAL-492 256 chr2L 8676828 8676870 chr2L 8676918 8676965 9 91 5.5 2.5 4.0 1.8 137 chr2L 8676828 3` UTR CG9287 - chr2L 8676896 exon CG9287 - chr2L 8676965 exon CG9287 - chr2L_9_8675001 chr2L_8675001 RAL-492 257 chr2L 8723109 8723147 chr2L 8731490 8731544 Tirant 23 8394 2.5 2.0 2.2 7.2 8435 chr2L 8723109 intron raw - chr2L 8727326 intron raw - chr2L 8731544 intron raw - chr2L_23_8725001 chr2L_8725001 RAL-492 258 chr2L 8765157 8765204 chr2L 8765264 8765308 16 102 4.0 3.0 3.5 3.6 151 chr2L 8765157 intergenic CG9463 - chr2L 8765232 intergenic CG9463 - chr2L 8765308 3` UTR CG9463 - chr2L_16_8765001 chr2L_8765001 RAL-492 259 chr2L 8794984 8795031 chr2L 8795093 8795134 17 108 3.5 5.5 4.5 3.1 150 chr2L 8794984 intergenic not near genes chr2L 8795059 intergenic not near genes chr2L 8795134 intergenic not near genes chr2L_17_8795001 chr2L_8795001 RAL-492 260 chr2L 8939648 8939697 chr2L 8939748 8939797 6 100 4.0 4.0 4.0 1.2 149 chr2L 8939648 3` UTR Tsp29Fb + chr2L 8939722 3` UTR Tsp29Fb + chr2L 8939797 3` UTR CG9510 - chr2L_6_8935001 chr2L_8935001 RAL-492 261 chr2L 9000257 9000306 chr2L 9007787 9007836 roo 19 7525 4.0 0.0 2.0 6.3 7579 chr2L 9000257 intergenic Try29F + chr2L 9004046 intergenic not near genes chr2L 9007836 intergenic not near genes chr2L_19_9000001 chr2L_9000001 RAL-492 262 chr2L 9007793 9007803 chr2L 9007892 9007898 7 98 0.0 0.0 0.0 7.0 105 chr2L 9007793 intergenic not near genes chr2L 9007846 intergenic not near genes chr2L 9007898 intergenic not near genes chr2L_7_9005001 chr2L_9005001 RAL-492 263 chr2L 9017906 9017955 chr2L 9018016 9018016 20 104 3.0 2.5 2.8 5.3 110 chr2L 9017906 intergenic not near genes chr2L 9017961 intergenic not near genes chr2L 9018016 intergenic not near genes chr2L_20_9015001 chr2L_9015001 RAL-492 264 chr2L 9070570 9070604 chr2L 9070766 9070800 5 196 3.0 1.0 2.0 1.7 230 chr2L 9070570 intron CG31708 - chr2L 9070685 intron CG31708 - chr2L 9070800 intron CG31708 - chr2L_5_9070001 chr2L_9070001 RAL-492 265 chr2L 9084337 9084340 chr2L 16217660 16217660 8 7133321 18.5 23.5 21.0 0.4 7133323 chr2L 9084337 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_8_12650001 chr2L_12650001 RAL-492 266 chr2L 9098621 9098639 chr2L 9098724 9098741 7 103 4.0 7.0 5.5 1.1 120 chr2L 9098621 intergenic CG31609 + chr2L 9098681 intergenic not near genes chr2L 9098741 intergenic not near genes chr2L_7_9095001 chr2L_9095001 RAL-492 267 chr2L 9098645 9098667 chr2L 9098718 9098770 15 101 2.5 6.0 4.2 2.9 125 chr2L 9098645 intergenic CG31609 + chr2L 9098708 intergenic not near genes chr2L 9098770 intergenic not near genes chr2L_15_9095001 chr2L_9095001 RAL-492 268 chr2L 9114081 9114126 chr2L 9114175 9114224 15 96 5.5 3.0 4.2 2.9 143 chr2L 9114081 intergenic not near genes chr2L 9114152 intergenic not near genes chr2L 9114224 intergenic not near genes chr2L_15_9110001 chr2L_9110001 RAL-492 269 chr2L 9150645 9150684 chr2L 9150771 9150772 9 124 4.0 5.5 4.8 1.6 127 chr2L 9150645 intron CG32982 + chr2L 9150708 intron CG32982 + chr2L 9150772 intron CG32982 + chr2L_9_9150001 chr2L_9150001 RAL-492 270 chr2L 9217950 9218003 chr2L 9222757 9222760 Doc 11 4800 2.0 4.0 3.0 2.8 4810 chr2L 9217950 intron tai + chr2L 9220355 intron tai + chr2L 9222760 intron tai + chr2L_11_9220001 chr2L_9220001 RAL-492 271 chr2L 9297358 9297394 chr2L 9297455 9297491 9 95 4.0 3.0 3.5 2.0 133 chr2L 9297358 3` UTR Ggamma30A + chr2L 9297424 3` UTR Ggamma30A + chr2L 9297491 3` UTR Ggamma30A + chr2L_9_9295001 chr2L_9295001 RAL-492 272 chr2L 9303341 9303489 chr2L 9303464 9303585 24 113 0.0 0.0 0.0 24.0 244 chr2L 9303341 intergenic not near genes chr2L 9303463 intergenic not near genes chr2L 9303585 intergenic not near genes chr2L_24_9300001 chr2L_9300001 RAL-492 273 chr2L 9304490 9304516 chr2L 9304589 9304615 8 98 2.5 4.0 3.2 1.9 125 chr2L 9304490 3` UTR CR42844 - chr2L 9304552 3` UTR CR42844 - chr2L 9304615 3` UTR CR42844 - chr2L_8_9300001 chr2L_9300001 RAL-492 274 chr2L 9364285 9364330 chr2L 9364404 9364439 9 114 0.0 4.5 2.2 2.8 154 chr2L 9364285 intergenic CR43404 + chr2L 9364362 intron CR43404 + chr2L 9364439 intron CR43404 + chr2L_9_9360001 chr2L_9360001 RAL-492 275 chr2L 9380225 9380252 chr2L 9380340 9380367 9 114 5.0 3.0 4.0 1.8 142 chr2L 9380225 exon Shawl - chr2L 9380296 intron Shawl - chr2L 9380367 intron Shawl - chr2L_9_9380001 chr2L_9380001 RAL-492 276 chr2L 9387246 9387274 chr2L 9387364 9387392 6 118 0.5 1.0 0.8 3.3 146 chr2L 9387246 intron Shawl - chr2L 9387319 intron Shawl - chr2L 9387392 intron,5` UTR Shawl -,Aldh + chr2L_6_9385001 chr2L_9385001 RAL-492 277 chr2L 9393491 9393512 chr2L 9396478 9396499 jockey 9 2985 5.0 7.5 6.2 1.2 3008 chr2L 9393491 intron Shawl - chr2L 9394995 intron Shawl - chr2L 9396499 intron Shawl - chr2L_9_9390001 chr2L_9390001 RAL-492 278 chr2L 9393513 9393527 chr2L 9396476 9396514 jockey 6 2979 3.0 7.5 5.2 1.0 3001 chr2L 9393513 intron Shawl - chr2L 9395014 intron Shawl - chr2L 9396514 intron Shawl - chr2L_6_9395001 chr2L_9395001 RAL-492 279 chr2L 9456911 9456931 chr2L 9457012 9457032 4 101 3.5 2.5 3.0 1.0 121 chr2L 9456911 intron numb + chr2L 9456972 intron numb + chr2L 9457032 intron numb + chr2L_4_9455001 chr2L_9455001 RAL-492 280 chr2L 9456943 9456953 chr2L 9457011 9457052 5 93 2.5 2.5 2.5 1.4 109 chr2L 9456943 intron numb + chr2L 9456998 intron numb + chr2L 9457052 intron numb + chr2L_5_9455001 chr2L_9455001 RAL-492 281 chr2L 9474766 9474809 chr2L 9474880 9474923 8 113 1.5 1.0 1.2 3.6 157 chr2L 9474766 intergenic not near genes chr2L 9474844 intergenic not near genes chr2L 9474923 intergenic not near genes chr2L_8_9470001 chr2L_9470001 RAL-492 282 chr2L 9527245 9527304 chr2L 9527342 9527406 11 97 0.0 0.0 0.0 11.0 161 chr2L 9527245 intron Oatp30B + chr2L 9527326 intron Oatp30B + chr2L 9527406 intron Oatp30B + chr2L_11_9525001 chr2L_9525001 RAL-492 283 chr2L 9532831 9532842 chr2L 9532966 9532977 4 133 4.5 5.5 5.0 0.7 146 chr2L 9532831 intron Oatp30B + chr2L 9532904 intron Oatp30B + chr2L 9532977 intron Oatp30B + chr2L_4_9530001 chr2L_9530001 RAL-492 284 chr2L 9601673 9601882 chr2L 9601782 9601982 6 106 3.0 3.5 3.2 1.4 309 chr2L 9601673 intergenic not near genes chr2L 9601828 intergenic not near genes chr2L 9601982 intergenic not near genes chr2L_6_9600001 chr2L_9600001 RAL-492 285 chr2L 9618874 9618916 chr2L 9618970 9619012 14 96 1.5 4.0 2.8 3.7 138 chr2L 9618874 intron GlcAT-S + chr2L 9618943 intron GlcAT-S + chr2L 9619012 intron GlcAT-S + chr2L_14_9615001 chr2L_9615001 RAL-492 286 chr2L 9655891 9655909 chr2L 9655967 9655986 5 96 4.5 2.0 3.2 1.2 95 chr2L 9655891 exon Apoltp + chr2L 9655938 3` UTR Apoltp + chr2L 9655986 3` UTR Apoltp + chr2L_5_9655001 chr2L_9655001 RAL-492 287 chr2L 9705199 9705218 chr2L 9705296 9705314 6 96 6.5 7.0 6.8 0.8 115 chr2L 9705199 intron,intron pelo +,CG31710 - chr2L 9705256 intron,intron pelo +,CG31710 - chr2L 9705314 intron,intron pelo +,CG31710 - chr2L_6_9705001 chr2L_9705001 RAL-492 288 chr2L 9705221 9705236 chr2L 9705295 9705333 6 91 6.0 7.0 6.5 0.8 112 chr2L 9705221 intron,intron pelo +,CG31710 - chr2L 9705277 intron,intron pelo +,CG31710 - chr2L 9705333 intron,intron pelo +,CG31710 - chr2L_6_9705001 chr2L_9705001 RAL-492 289 chr2L 9715025 9715036 chr2L 9715154 9715164 4 129 0.0 11.5 5.8 0.6 139 chr2L 9715025 3` UTR Nckx30C - chr2L 9715094 3` UTR Nckx30C - chr2L 9715164 3` UTR Nckx30C - chr2L_4_9715001 chr2L_9715001 RAL-492 290 chr2L 9831195 9831241 chr2L 9831292 9831320 10 93 5.0 2.5 3.8 2.1 125 chr2L 9831195 intron nAChRalpha6 - chr2L 9831258 intron nAChRalpha6 - chr2L 9831320 intron nAChRalpha6 - chr2L_10_9830001 chr2L_9830001 RAL-492 291 chr2L 9836381 9836428 chr2L 9836479 9836528 13 99 2.0 1.0 1.5 5.2 147 chr2L 9836381 intron nAChRalpha6 - chr2L 9836454 intron nAChRalpha6 - chr2L 9836528 intron nAChRalpha6 - chr2L_13_9835001 chr2L_9835001 RAL-492 292 chr2L 9837412 9837444 chr2L 9837510 9837542 13 97 2.0 0.5 1.2 5.9 130 chr2L 9837412 intron nAChRalpha6 - chr2L 9837477 intron nAChRalpha6 - chr2L 9837542 intron nAChRalpha6 - chr2L_13_9835001 chr2L_9835001 RAL-492 293 chr2L 9862339 9862358 chr2L 9862467 9862486 6 128 0.0 5.5 2.8 1.6 147 chr2L 9862339 intron nAChRalpha6 - chr2L 9862412 intron nAChRalpha6 - chr2L 9862486 intron nAChRalpha6 - chr2L_6_9860001 chr2L_9860001 RAL-492 294 chr2L 9883142 9883170 chr2L 9883258 9883285 5 116 6.5 1.0 3.8 1.0 143 chr2L 9883142 intron nAChRalpha6 - chr2L 9883214 intron nAChRalpha6 - chr2L 9883285 intron nAChRalpha6 - chr2L_5_9880001 chr2L_9880001 RAL-492 295 chr2L 9960706 9960759 chr2L 9960866 9960917 15 157 2.5 5.0 3.8 3.1 211 chr2L 9960706 3` UTR CG5850 - chr2L 9960812 3` UTR CG5850 - chr2L 9960917 3` UTR CG5850 - chr2L_15_9960001 chr2L_9960001 RAL-492 296 chr2L 9973714 9973757 chr2L 9980843 9980896 HMS-Beagle 18 7130 2.5 6.0 4.2 3.5 7182 chr2L 9973714 intergenic not near genes chr2L 9977305 intergenic not near genes chr2L 9980896 intergenic not near genes chr2L_18_9975001 chr2L_9975001 RAL-492 297 chr2L 9982196 9982228 chr2L 9982305 9982350 6 113 0.0 5.0 2.5 1.7 154 chr2L 9982196 intergenic not near genes chr2L 9982273 intergenic not near genes chr2L 9982350 intergenic not near genes chr2L_6_9980001 chr2L_9980001 RAL-492 298 chr2L 10023055 10023103 chr2L 10023160 10023202 24 101 3.0 7.0 5.0 4.0 147 chr2L 10023055 intergenic not near genes chr2L 10023128 intergenic not near genes chr2L 10023202 intergenic not near genes chr2L_24_10020001 chr2L_10020001 RAL-492 299 chr2L 10045406 10045416 chr2L 10045506 10045516 4 100 4.0 5.5 4.8 0.7 110 chr2L 10045406 intergenic not near genes chr2L 10045461 intergenic not near genes chr2L 10045516 intergenic not near genes chr2L_4_10045001 chr2L_10045001 RAL-492 300 chr2L 10045418 10045426 chr2L 10045498 10045508 4 90 3.5 5.0 4.2 0.8 90 chr2L 10045418 intergenic not near genes chr2L 10045463 intergenic not near genes chr2L 10045508 intergenic not near genes chr2L_4_10045001 chr2L_10045001 RAL-492 301 chr2L 10051727 10051747 chr2L 10051813 10051852 8 91 7.0 7.5 7.2 1.0 125 chr2L 10051727 5` UTR CR44874 + chr2L 10051790 5` UTR CR44874 + chr2L 10051852 5` UTR CR44874 + chr2L_8_10050001 chr2L_10050001 RAL-492 302 chr2L 10071463 10071487 chr2L 10071608 10071632 7 145 11.0 5.0 8.0 0.8 169 chr2L 10071463 intron CG44153 - chr2L 10071548 intron CG44153 - chr2L 10071632 intron CG44153 - chr2L_7_10070001 chr2L_10070001 RAL-492 303 chr2L 10085766 10085811 chr2L 10085864 10085909 16 98 5.5 3.0 4.2 3.1 143 chr2L 10085766 intron CG44153 - chr2L 10085838 intron CG44153 - chr2L 10085909 intron CG44153 - chr2L_16_10085001 chr2L_10085001 RAL-492 304 chr2L 10114982 10115005 chr2L 10115086 10115109 4 104 2.5 1.5 2.0 1.3 127 chr2L 10114982 intron,intron CG44153 -,CG34109 + chr2L 10115046 intron,intron CG44153 -,CG34109 + chr2L 10115109 intron,intron CG44153 -,CG34109 + chr2L_4_10115001 chr2L_10115001 RAL-492 305 chr2L 10138174 10138191 chr2L 10143438 10143445 Rt1c 4 5262 4.5 5.0 4.8 0.7 5271 chr2L 10138174 intron CG44153 - chr2L 10140810 intron CG44153 - chr2L 10143445 intron CG44153 - chr2L_4_10140001 chr2L_10140001 RAL-492 306 chr2L 10150401 10150426 chr2L 10150495 10150520 7 96 5.0 5.5 5.2 1.1 119 chr2L 10150401 intron,exon CG44153 -,CG4839 + chr2L 10150460 intron,intron CG44153 -,CG4839 + chr2L 10150520 intron,intron CG44153 -,CG4839 + chr2L_7_10150001 chr2L_10150001 RAL-492 307 chr2L 10153190 10153237 chr2L 10153286 10153305 14 89 2.0 2.5 2.2 4.4 115 chr2L 10153190 intron,exon CG44153 -,CG4839 + chr2L 10153248 intron,intron CG44153 -,CG4839 + chr2L 10153305 intron,intron CG44153 -,CG4839 + chr2L_14_10150001 chr2L_10150001 RAL-492 308 chr2L 10156350 10156354 chr2L 10163790 10163809 blood 4 7468 4.5 6.5 5.5 0.6 7459 chr2L 10156350 intron,3` UTR CG44153 -,CG4839 + chr2L 10160080 intron CG44153 - chr2L 10163809 intron CG44153 - chr2L_4_10160001 chr2L_10160001 RAL-492 309 chr2L 10176023 10176024 chr2L 16071771 16071771 8 5895747 24.5 20.0 22.2 0.3 5895748 chr2L 10176023 intron CG44153 - chr2L 13123897 intergenic not near genes chr2L 16071771 intron beat-Ia + chr2L_8_13120001 chr2L_13120001 RAL-492 310 chr2L 10191446 10191492 chr2L 10191548 10191596 6 103 0.0 4.0 2.0 2.0 150 chr2L 10191446 intron,5` UTR Sur -,CG31874 - chr2L 10191521 intron Sur - chr2L 10191596 intron Sur - chr2L_6_10190001 chr2L_10190001 RAL-492 311 chr2L 10281654 10281816 chr2L 10281769 10281926 6 113 0.0 0.0 0.0 6.0 272 chr2L 10281654 intergenic CG5604 - chr2L 10281790 intergenic CG5604 - chr2L 10281926 intergenic CG5604 - chr2L_6_10280001 chr2L_10280001 RAL-492 312 chr2L 10314493 10314517 chr2L 10314622 10314646 7 129 5.0 3.5 4.2 1.3 153 chr2L 10314493 intergenic CG5384 -,CG4972 + chr2L 10314570 intergenic CG5384 -,CG4972 + chr2L 10314646 intergenic CG4972 +,CG5384 - chr2L_7_10310001 chr2L_10310001 RAL-492 313 chr2L 10500039 10500073 chr2L 10500145 10500179 4 105 0.5 1.5 1.0 2.0 140 chr2L 10500039 intron Myo31DF - chr2L 10500109 intron Myo31DF - chr2L 10500179 intron Myo31DF - chr2L_4_10500001 chr2L_10500001 RAL-492 314 chr2L 10531599 10531622 chr2L 10531711 10531734 5 112 1.0 2.5 1.8 1.8 135 chr2L 10531599 3` UTR Lip4 + chr2L 10531666 3` UTR Lip4 + chr2L 10531734 3` UTR Lip4 + chr2L_5_10530001 chr2L_10530001 RAL-492 315 chr2L 10540854 10540879 chr2L 10540950 10540977 7 98 2.0 4.5 3.2 1.7 123 chr2L 10540854 intergenic not near genes chr2L 10540916 intergenic not near genes chr2L 10540977 intergenic not near genes chr2L_7_10540001 chr2L_10540001 RAL-492 316 chr2L 10563901 10563946 chr2L 10564006 10564038 8 108 1.5 5.0 3.2 1.9 137 chr2L 10563901 intron Trim9 + chr2L 10563970 intron Trim9 + chr2L 10564038 intron Trim9 + chr2L_8_10560001 chr2L_10560001 RAL-492 317 chr2L 10572687 10572704 chr2L 10572784 10572805 6 100 8.5 4.0 6.2 0.8 118 chr2L 10572687 intron Trim9 + chr2L 10572746 intron Trim9 + chr2L 10572805 intron Trim9 + chr2L_6_10570001 chr2L_10570001 RAL-492 318 chr2L 10572710 10572735 chr2L 10572783 10572835 14 98 4.0 4.0 4.0 2.8 125 chr2L 10572710 intron Trim9 + chr2L 10572772 intron Trim9 + chr2L 10572835 intron Trim9 + chr2L_14_10570001 chr2L_10570001 RAL-492 319 chr2L 10586495 10586526 chr2L 10586592 10586627 4 100 9.0 2.0 5.5 0.6 132 chr2L 10586495 intron Trim9 + chr2L 10586561 intron Trim9 + chr2L 10586627 intron Trim9 + chr2L_4_10585001 chr2L_10585001 RAL-492 320 chr2L 10592821 10592873 chr2L 10600503 10600555 opus 16 7680 1.5 2.0 1.8 5.7 7734 chr2L 10592821 intron Trim9 + chr2L 10596688 intron Trim9 + chr2L 10600555 intron Trim9 + chr2L_16_10595001 chr2L_10595001 RAL-492 321 chr2L 10727266 10727283 chr2L 10727397 10727413 6 131 6.5 0.0 3.2 1.4 147 chr2L 10727266 intron CG6431 + chr2L 10727340 intron CG6431 + chr2L 10727413 intron CG6431 + chr2L_6_10725001 chr2L_10725001 RAL-492 322 chr2L 10787904 10787911 chr2L 10787974 10788007 6 81 0.5 1.0 0.8 3.3 103 chr2L 10787904 intron CG31869 - chr2L 10787956 intron CG31869 - chr2L 10788007 intron CG31869 - chr2L_6_10785001 chr2L_10785001 RAL-492 323 chr2L 10793298 10793338 chr2L 10793392 10793435 17 96 5.0 3.5 4.2 3.3 137 chr2L 10793298 intron CG31869 - chr2L 10793366 intron CG31869 - chr2L 10793435 intron CG31869 - chr2L_17_10790001 chr2L_10790001 RAL-492 324 chr2L 10836739 10836780 chr2L 10836838 10836878 5 91 1.5 3.0 2.2 1.6 139 chr2L 10836739 intron Nos - chr2L 10836808 intron Nos - chr2L 10836878 intron Nos - chr2L_5_10835001 chr2L_10835001 RAL-492 325 chr2L 10850944 10850989 chr2L 10851044 10851091 4 100 4.0 0.0 2.0 1.3 147 chr2L 10850944 intron CG43129 + chr2L 10851018 intron CG43129 + chr2L 10851091 intron CG43129 + chr2L_4_10850001 chr2L_10850001 RAL-492 326 chr2L 10852158 10852171 chr2L 10852267 10852279 4 108 5.0 5.0 5.0 0.7 121 chr2L 10852158 intron CG43129 + chr2L 10852218 intron CG43129 + chr2L 10852279 intron CG43129 + chr2L_4_10850001 chr2L_10850001 RAL-492 327 chr2L 10862847 10862870 chr2L 10864457 10864499 Rt1c 14 1627 2.5 7.5 5.0 2.3 1652 chr2L 10862847 3` UTR CR43807 - chr2L 10863673 intron CR43807 - chr2L 10864499 3` UTR CR43807 - chr2L_14_10860001 chr2L_10860001 RAL-492 328 chr2L 10946940 10946968 chr2L 10956170 10956183 roo 7 9227 4.0 5.0 4.5 1.3 9243 chr2L 10946940 intron dpr2 - chr2L 10951562 intron dpr2 - chr2L 10956183 intron dpr2 - chr2L_7_10950001 chr2L_10950001 RAL-492 329 chr2L 11169331 11169342 chr2L 11169428 11169428 4 92 5.5 6.5 6.0 0.6 97 chr2L 11169331 intron Ca-beta - chr2L 11169380 intron Ca-beta - chr2L 11169428 intron Ca-beta - chr2L_4_11165001 chr2L_11165001 RAL-492 330 chr2L 11169353 11169356 chr2L 11169415 11169423 5 78 4.5 6.5 5.5 0.8 70 chr2L 11169353 intron Ca-beta - chr2L 11169388 intron Ca-beta - chr2L 11169423 intron Ca-beta - chr2L_5_11165001 chr2L_11165001 RAL-492 331 chr2L 11169361 11169501 chr2L 11169414 11169656 9 143 1.5 6.5 4.0 1.8 295 chr2L 11169361 intron Ca-beta - chr2L 11169508 intron Ca-beta - chr2L 11169656 intron Ca-beta - chr2L_9_11165001 chr2L_11165001 RAL-492 332 chr2L 11189250 11189252 chr2L 11189361 11189369 4 116 6.0 0.0 3.0 1.0 119 chr2L 11189250 intron Ca-beta - chr2L 11189310 intron Ca-beta - chr2L 11189369 intron Ca-beta - chr2L_4_11185001 chr2L_11185001 RAL-492 333 chr2L 11292356 11292405 chr2L 11292456 11292485 21 100 4.5 4.5 4.5 3.8 129 chr2L 11292356 intergenic not near genes chr2L 11292420 intergenic not near genes chr2L 11292485 intergenic not near genes chr2L_21_11290001 chr2L_11290001 RAL-492 334 chr2L 11293709 11293746 chr2L 11293857 11293902 16 154 6.0 3.0 4.5 2.9 193 chr2L 11293709 intergenic not near genes chr2L 11293806 intergenic not near genes chr2L 11293902 intergenic not near genes chr2L_16_11290001 chr2L_11290001 RAL-492 335 chr2L 11308985 11309038 chr2L 11309113 11309162 5 125 4.0 2.0 3.0 1.2 177 chr2L 11308985 intergenic not near genes chr2L 11309074 intergenic not near genes chr2L 11309162 intergenic not near genes chr2L_5_11305001 chr2L_11305001 RAL-492 336 chr2L 11360970 11361023 chr2L 11361075 11361108 24 102 4.0 10.0 7.0 3.0 138 chr2L 11360970 intron salr + chr2L 11361039 intron salr + chr2L 11361108 intron salr + chr2L_24_11360001 chr2L_11360001 RAL-492 337 chr2L 11390702 11390755 chr2L 11390822 11390878 7 120 3.0 2.5 2.8 1.8 176 chr2L 11390702 3` UTR CR43681 - chr2L 11390790 3` UTR CR43681 - chr2L 11390878 3` UTR CR43681 - chr2L_7_11390001 chr2L_11390001 RAL-492 338 chr2L 11444243 11444283 chr2L 11444343 11444383 9 85 3.0 3.5 3.2 2.1 140 chr2L 11444243 intron salm - chr2L 11444313 intron salm - chr2L 11444383 intron salm - chr2L_9_11440001 chr2L_11440001 RAL-492 339 chr2L 11469506 11469512 chr2L 11469608 11469614 5 102 3.5 4.5 4.0 1.0 108 chr2L 11469506 intergenic not near genes chr2L 11469560 intergenic not near genes chr2L 11469614 intergenic not near genes chr2L_5_11465001 chr2L_11465001 RAL-492 340 chr2L 11537168 11537186 chr2L 11537269 11537269 5 94 5.5 3.5 4.5 0.9 101 chr2L 11537168 intergenic CG43438 + chr2L 11537218 intergenic CG43438 + chr2L 11537269 intergenic CG43438 + chr2L_5_11535001 chr2L_11535001 RAL-492 341 chr2L 11540602 11540612 chr2L 11548024 11548034 Tabor 4 7421 3.0 3.5 3.2 1.0 7432 chr2L 11540602 intergenic not near genes chr2L 11544318 intergenic not near genes chr2L 11548034 intergenic not near genes chr2L_4_11540001 chr2L_11540001 RAL-492 342 chr2L 11563620 11563631 chr2L 11568843 11568855 copia 5 5224 11.0 4.5 7.8 0.6 5235 chr2L 11563620 intergenic not near genes chr2L 11566238 intergenic not near genes chr2L 11568855 intergenic not near genes chr2L_5_11565001 chr2L_11565001 RAL-492 343 chr2L 11563636 11563663 chr2L 11568838 11568884 copia 11 5218 5.0 3.0 4.0 2.2 5248 chr2L 11563636 intergenic not near genes chr2L 11566260 intergenic not near genes chr2L 11568884 intergenic not near genes chr2L_11_11565001 chr2L_11565001 RAL-492 344 chr2L 11618536 11618579 chr2L 11618647 11618685 10 110 2.0 4.0 3.0 2.5 149 chr2L 11618536 intron kek2 + chr2L 11618610 intron kek2 + chr2L 11618685 intron kek2 + chr2L_10_11615001 chr2L_11615001 RAL-492 345 chr2L 11676207 11676235 chr2L 11676500 11676528 8 289 2.5 4.5 3.5 1.8 321 chr2L 11676207 intergenic not near genes chr2L 11676368 intergenic not near genes chr2L 11676528 intergenic not near genes chr2L_8_11675001 chr2L_11675001 RAL-492 346 chr2L 11713491 11713533 chr2L 11720979 11721020 blood 12 7483 5.5 6.5 6.0 1.7 7529 chr2L 11713491 intergenic not near genes chr2L 11717256 intergenic not near genes chr2L 11721020 intergenic CR44143 + chr2L_12_11715001 chr2L_11715001 RAL-492 347 chr2L 11743724 11743768 chr2L 11743821 11743865 12 97 7.0 6.5 6.8 1.5 141 chr2L 11743724 exon Vha100-5 + chr2L 11743794 intron,3` UTR Vha100-5 +,CR44144 - chr2L 11743865 exon,3` UTR Vha100-5 +,CR44144 - chr2L_12_11740001 chr2L_11740001 RAL-492 348 chr2L 11752847 11752891 chr2L 11753156 11753201 13 309 2.5 4.5 3.5 2.9 354 chr2L 11752847 intergenic CG42470 - chr2L 11753024 3` UTR CG42470 - chr2L 11753201 exon CG42470 - chr2L_13_11750001 chr2L_11750001 RAL-492 349 chr2L 11862340 11862389 chr2L 11862451 11862502 12 111 3.5 4.5 4.0 2.4 162 chr2L 11862340 intron Pde1c - chr2L 11862421 intron Pde1c - chr2L 11862502 intron Pde1c - chr2L_12_11860001 chr2L_11860001 RAL-492 350 chr2L 11904649 11904699 chr2L 11904787 11904837 8 135 6.5 2.5 4.5 1.5 188 chr2L 11904649 intron Pde1c - chr2L 11904743 intron Pde1c - chr2L 11904837 intron Pde1c - chr2L_8_11900001 chr2L_11900001 RAL-492 351 chr2L 11906781 11906813 chr2L 11906863 11906915 9 99 2.5 1.5 2.0 3.0 134 chr2L 11906781 intron Pde1c - chr2L 11906848 intron Pde1c - chr2L 11906915 intron Pde1c - chr2L_9_11905001 chr2L_11905001 RAL-492 352 chr2L 11947359 11947391 chr2L 11947456 11947488 10 95 3.0 2.5 2.8 2.6 129 chr2L 11947359 intergenic Cry + chr2L 11947424 intergenic Cry + chr2L 11947488 intergenic Cry +,CG16964 + chr2L_10_11945001 chr2L_11945001 RAL-492 353 chr2L 11951316 11951362 chr2L 11951432 11951479 6 115 1.0 3.0 2.0 2.0 163 chr2L 11951316 intergenic not near genes chr2L 11951398 intergenic not near genes chr2L 11951479 intergenic not near genes chr2L_6_11950001 chr2L_11950001 RAL-492 354 chr2L 11976070 11976119 chr2L 11976167 11976216 12 96 5.0 0.0 2.5 3.4 146 chr2L 11976070 intergenic not near genes chr2L 11976143 intergenic not near genes chr2L 11976216 intergenic not near genes chr2L_12_11975001 chr2L_11975001 RAL-492 355 chr2L 12067311 12067343 chr2L 12074383 12074415 297 5 7072 4.0 2.5 3.2 1.2 7104 chr2L 12067311 intergenic not near genes chr2L 12070863 intergenic not near genes chr2L 12074415 intergenic not near genes chr2L_5_12070001 chr2L_12070001 RAL-492 356 chr2L 12092355 12092404 chr2L 12092511 12092560 10 155 2.5 4.5 3.5 2.2 205 chr2L 12092355 intron,3` UTR Pex19 +,CR44594 - chr2L 12092458 intron Pex19 + chr2L 12092560 intron Pex19 + chr2L_10_12090001 chr2L_12090001 RAL-492 357 chr2L 12117417 12117469 chr2L 12117518 12117570 11 101 4.5 1.5 3.0 2.8 153 chr2L 12117417 intron CG17211 + chr2L 12117494 intron CG17211 + chr2L 12117570 intron CG17211 + chr2L_11_12115001 chr2L_12115001 RAL-492 358 chr2L 12121883 12121917 chr2L 12121985 12121994 7 98 3.0 4.0 3.5 1.6 111 chr2L 12121883 intron CG17211 + chr2L 12121938 intron CG17211 + chr2L 12121994 intron CG17211 + chr2L_7_12120001 chr2L_12120001 RAL-492 359 chr2L 12131448 12131497 chr2L 12131564 12131613 15 116 4.0 3.5 3.8 3.1 165 chr2L 12131448 intron rho-6 - chr2L 12131530 intron rho-6 - chr2L 12131613 intron rho-6 - chr2L_15_12130001 chr2L_12130001 RAL-492 360 chr2L 12132702 12132745 chr2L 12132808 12132851 11 106 0.0 1.5 0.8 6.1 149 chr2L 12132702 intron rho-6 - chr2L 12132776 intron rho-6 - chr2L 12132851 intron rho-6 - chr2L_11_12130001 chr2L_12130001 RAL-492 361 chr2L 12179764 12179791 chr2L 12179855 12179897 8 102 2.5 3.0 2.8 2.1 133 chr2L 12179764 intron aret + chr2L 12179830 intron aret + chr2L 12179897 intron aret + chr2L_8_12175001 chr2L_12175001 RAL-492 362 chr2L 12294237 12294276 chr2L 12294339 12294377 4 102 1.0 1.5 1.2 1.8 140 chr2L 12294237 intron aret + chr2L 12294307 intron aret + chr2L 12294377 intron aret + chr2L_4_12290001 chr2L_12290001 RAL-492 363 chr2L 12299597 12299609 chr2L 12299694 12299706 4 97 8.5 3.5 6.0 0.6 109 chr2L 12299597 intron aret + chr2L 12299652 intron aret + chr2L 12299706 intron aret + chr2L_4_12295001 chr2L_12295001 RAL-492 364 chr2L 12337265 12337283 chr2L 12337373 12337391 5 108 1.0 0.0 0.5 3.3 126 chr2L 12337265 intergenic not near genes chr2L 12337328 intergenic not near genes chr2L 12337391 intergenic not near genes chr2L_5_12335001 chr2L_12335001 RAL-492 365 chr2L 12381434 12381475 chr2L 12381539 12381580 17 103 5.5 6.0 5.8 2.5 146 chr2L 12381434 intron bru-2 + chr2L 12381507 intron bru-2 + chr2L 12381580 intron bru-2 + chr2L_17_12380001 chr2L_12380001 RAL-492 366 chr2L 12387611 12387654 chr2L 12387711 12387755 9 100 1.0 2.5 1.8 3.2 144 chr2L 12387611 intron bru-2 + chr2L 12387683 intron bru-2 + chr2L 12387755 intron bru-2 + chr2L_9_12385001 chr2L_12385001 RAL-492 367 chr2L 12418853 12418901 chr2L 12418966 12419016 10 110 3.5 1.5 2.5 2.9 163 chr2L 12418853 intron vir-1 - chr2L 12418934 intron vir-1 - chr2L 12419016 intron vir-1 - chr2L_10_12415001 chr2L_12415001 RAL-492 368 chr2L 12470723 12470729 chr2L 12470820 12470825 4 96 16.0 3.0 9.5 0.4 102 chr2L 12470723 intron bun - chr2L 12470774 intron bun - chr2L 12470825 intron bun - chr2L_4_12470001 chr2L_12470001 RAL-492 369 chr2L 12487868 12487920 chr2L 12487967 12488021 18 98 2.5 5.0 3.8 3.8 153 chr2L 12487868 intron bun - chr2L 12487944 intron bun - chr2L 12488021 intron bun - chr2L_18_12485001 chr2L_12485001 RAL-492 370 chr2L 12491401 12491513 chr2L 12491509 12491623 9 134 0.0 0.0 0.0 9.0 222 chr2L 12491401 intron bun - chr2L 12491512 intron bun - chr2L 12491623 intron bun - chr2L_9_12490001 chr2L_12490001 RAL-492 371 chr2L 12510129 12510140 chr2L 12510213 12510239 8 92 17.0 14.0 15.5 0.5 110 chr2L 12510129 intron bun - chr2L 12510184 intron bun - chr2L 12510239 intron bun - chr2L_8_12510001 chr2L_12510001 RAL-492 372 chr2L 12523737 12523747 chr2L 12523969 12523978 5 232 4.0 4.5 4.2 1.0 241 chr2L 12523737 intron bun - chr2L 12523858 intron bun - chr2L 12523978 intron bun - chr2L_5_12520001 chr2L_12520001 RAL-492 373 chr2L 12551014 12551045 chr2L 12551110 12551141 9 96 3.5 2.5 3.0 2.2 127 chr2L 12551014 intergenic not near genes chr2L 12551078 intergenic not near genes chr2L 12551141 intergenic not near genes chr2L_9_12550001 chr2L_12550001 RAL-492 374 chr2L 12558306 12558339 chr2L 12565455 12565484 HMS-Beagle 9 7147 3.0 3.0 3.0 2.2 7178 chr2L 12558306 intergenic not near genes chr2L 12561895 intergenic not near genes chr2L 12565484 intergenic not near genes chr2L_9_12560001 chr2L_12560001 RAL-492 375 chr2L 12619882 12619906 chr2L 12619978 12619993 4 94 5.5 2.5 4.0 0.8 111 chr2L 12619882 intron,intron nub +,Ref2 - chr2L 12619938 intron,intron nub +,Ref2 - chr2L 12619993 intron,intron nub +,Ref2 - chr2L_4_12615001 chr2L_12615001 RAL-492 376 chr2L 12693829 12693864 chr2L 12693926 12693933 14 95 5.5 0.5 3.0 3.5 104 chr2L 12693829 exon CG6153 + chr2L 12693881 3` UTR,3` UTR CG6153 +,CG5780 - chr2L 12693933 3` UTR,3` UTR CG6153 +,CG5780 - chr2L_14_12690001 chr2L_12690001 RAL-492 377 chr2L 12728901 12728949 chr2L 12729161 12729209 pogo 17 260 4.5 3.0 3.8 3.5 308 chr2L 12728901 intron MRP + chr2L 12729055 intron MRP + chr2L 12729209 exon MRP + chr2L_17_12725001 chr2L_12725001 RAL-492 378 chr2L 12731054 12731086 chr2L 12735841 12735873 F-element 6 4787 2.5 3.5 3.0 1.5 4819 chr2L 12731054 intron MRP + chr2L 12733464 intron MRP + chr2L 12735873 intron MRP + chr2L_6_12730001 chr2L_12730001 RAL-492 379 chr2L 12739156 12739197 chr2L 12743957 12743998 Doc 13 4801 3.0 5.0 4.0 2.6 4842 chr2L 12739156 exon MRP + chr2L 12741577 intron MRP + chr2L 12743998 exon MRP + chr2L_13_12740001 chr2L_12740001 RAL-492 380 chr2L 12781783 12781811 chr2L 12789246 12789274 Quasimodo 7 7462 8.5 3.0 5.8 1.0 7491 chr2L 12781783 intergenic not near genes chr2L 12785528 intergenic not near genes chr2L 12789274 intergenic not near genes chr2L_7_12785001 chr2L_12785001 RAL-492 381 chr2L 12791592 12791632 chr2L 12795287 12795327 F-element 9 3683 3.0 6.0 4.5 1.6 3735 chr2L 12791592 intergenic not near genes chr2L 12793460 intergenic not near genes chr2L 12795327 intergenic not near genes chr2L_9_12790001 chr2L_12790001 RAL-492 382 chr2L 12838520 12838554 chr2L 12838623 12838657 8 103 3.0 4.5 3.8 1.7 137 chr2L 12838520 intergenic not near genes chr2L 12838588 intergenic not near genes chr2L 12838657 intergenic not near genes chr2L_8_12835001 chr2L_12835001 RAL-492 383 chr2L 12861679 12861729 chr2L 12863166 12863215 hobo 13 1485 5.0 4.0 4.5 2.4 1536 chr2L 12861679 intergenic not near genes chr2L 12862447 intergenic not near genes chr2L 12863215 intergenic not near genes chr2L_13_12860001 chr2L_12860001 RAL-492 384 chr2L 12930471 12930495 chr2L 12930567 12930580 9 92 4.0 2.0 3.0 2.2 109 chr2L 12930471 intergenic not near genes chr2L 12930526 intergenic not near genes chr2L 12930580 intergenic not near genes chr2L_9_12930001 chr2L_12930001 RAL-492 385 chr2L 12933847 12933875 chr2L 12941318 12941362 blood 6 7482 7.5 5.5 6.5 0.8 7515 chr2L 12933847 intergenic not near genes chr2L 12937604 intergenic not near genes chr2L 12941362 intergenic not near genes chr2L_6_12935001 chr2L_12935001 RAL-492 386 chr2L 12990517 12990538 chr2L 12990643 12990645 5 120 6.0 0.0 3.0 1.2 128 chr2L 12990517 intergenic not near genes chr2L 12990581 intergenic not near genes chr2L 12990645 intergenic not near genes chr2L_5_12990001 chr2L_12990001 RAL-492 387 chr2L 13036235 13036272 chr2L 13036497 13036534 X-element 12 262 4.5 4.5 4.5 2.2 299 chr2L 13036235 intron CG9932 - chr2L 13036384 intron CG9932 - chr2L 13036534 intron CG9932 - chr2L_12_13035001 chr2L_13035001 RAL-492 388 chr2L 13063384 13063416 chr2L 13063457 13063481 8 85 5.0 3.5 4.2 1.5 97 chr2L 13063384 intergenic not near genes chr2L 13063432 intergenic not near genes chr2L 13063481 intergenic not near genes chr2L_8_13060001 chr2L_13060001 RAL-492 389 chr2L 13147742 13147771 chr2L 13147824 13147866 13 91 3.5 5.5 4.5 2.4 124 chr2L 13147742 intergenic not near genes chr2L 13147804 intergenic not near genes chr2L 13147866 intergenic not near genes chr2L_13_13145001 chr2L_13145001 RAL-492 390 chr2L 13342043 13342063 chr2L 13342141 13342165 5 97 3.0 0.0 1.5 2.0 122 chr2L 13342043 intergenic not near genes chr2L 13342104 intergenic not near genes chr2L 13342165 intergenic not near genes chr2L_5_13340001 chr2L_13340001 RAL-492 391 chr2L 13405636 13405652 chr2L 13410452 13410469 Doc 6 4816 6.0 7.5 6.8 0.8 4833 chr2L 13405636 exon CG7110 + chr2L 13408052 intron CG7110 + chr2L 13410469 intron CG7110 + chr2L_6_13405001 chr2L_13405001 RAL-492 392 chr2L 13405654 13405658 chr2L 13410450 13410475 Doc 4 4810 4.5 7.0 5.8 0.6 4821 chr2L 13405654 exon CG7110 + chr2L 13408064 intron CG7110 + chr2L 13410475 intron CG7110 + chr2L_4_13405001 chr2L_13405001 RAL-492 393 chr2L 13405659 13405672 chr2L 13410445 13410489 Doc 9 4810 3.5 7.0 5.2 1.5 4830 chr2L 13405659 exon CG7110 + chr2L 13408074 intron CG7110 + chr2L 13410489 intron CG7110 + chr2L_9_13405001 chr2L_13405001 RAL-492 394 chr2L 13412307 13412338 chr2L 13412454 13412485 8 147 0.5 3.0 1.8 2.9 178 chr2L 13412307 intergenic CG16848 + chr2L 13412396 intergenic CG16848 + chr2L 13412485 intergenic CG16848 + chr2L_8_13410001 chr2L_13410001 RAL-492 395 chr2L 13422352 13422392 chr2L 13422449 13422489 10 97 0.5 3.5 2.0 3.3 137 chr2L 13422352 intron CG42784 + chr2L 13422420 intron CG42784 + chr2L 13422489 intron CG42784 + chr2L_10_13420001 chr2L_13420001 RAL-492 396 chr2L 13449474 13449495 chr2L 13456930 13456950 Quasimodo 7 7456 2.0 7.0 4.5 1.3 7476 chr2L 13449474 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453212 intron CG42784 + chr2L 13456950 intron CG42784 + chr2L_7_13450001 chr2L_13450001 RAL-492 397 chr2L 13460143 13460196 chr2L 13460256 13460308 9 106 4.5 2.0 3.2 2.1 165 chr2L 13460143 intron,exon CG42784 +,CG42810 + chr2L 13460226 intron CG42784 + chr2L 13460308 intron CG42784 + chr2L_9_13460001 chr2L_13460001 RAL-492 398 chr2L 13481443 13481481 chr2L 13482069 13482108 jockey 10 627 2.0 6.0 4.0 2.0 665 chr2L 13481443 intron CG42784 + chr2L 13481776 intron CG42784 + chr2L 13482108 intron CG42784 + chr2L_10_13480001 chr2L_13480001 RAL-492 399 chr2L 13513955 13513989 chr2L 13518556 13518590 7 4600 1.0 1.5 1.2 3.2 4635 chr2L 13513955 intron B4 - chr2L 13516272 intron B4 - chr2L 13518590 intron B4 - chr2L_7_13515001 chr2L_13515001 RAL-492 400 chr2L 13600382 13600388 chr2L 13600662 13600668 5 280 0.0 5.5 2.8 1.3 286 chr2L 13600382 intron kuz + chr2L 13600525 intron kuz + chr2L 13600668 intron kuz + chr2L_5_13600001 chr2L_13600001 RAL-492 401 chr2L 13600392 13600400 chr2L 13600648 13600680 5 272 0.0 5.0 2.5 1.4 288 chr2L 13600392 intron kuz + chr2L 13600536 intron kuz + chr2L 13600680 intron kuz + chr2L_5_13600001 chr2L_13600001 RAL-492 402 chr2L 13622206 13622227 chr2L 13622318 13622351 8 114 5.0 4.5 4.8 1.4 145 chr2L 13622206 intron kuz + chr2L 13622278 intron kuz + chr2L 13622351 intron kuz + chr2L_8_13620001 chr2L_13620001 RAL-492 403 chr2L 13622229 13622234 chr2L 13622314 13622324 6 100 3.0 4.5 3.8 1.2 95 chr2L 13622229 intron kuz + chr2L 13622276 intron kuz + chr2L 13622324 intron kuz + chr2L_6_13620001 chr2L_13620001 RAL-492 404 chr2L 13684249 13684288 chr2L 13684345 13684384 10 95 0.5 3.5 2.0 3.3 135 chr2L 13684249 exon CG31814 - chr2L 13684316 intron CG31814 - chr2L 13684384 exon CG31814 - chr2L_10_13680001 chr2L_13680001 RAL-492 405 chr2L 13692171 13692218 chr2L 13692296 13692343 15 125 5.0 3.5 4.2 2.9 172 chr2L 13692171 intron CG31814 - chr2L 13692257 intron CG31814 - chr2L 13692343 intron CG31814 - chr2L_15_13690001 chr2L_13690001 RAL-492 406 chr2L 13693008 13693037 chr2L 13693082 13693133 13 89 3.0 3.0 3.0 3.2 125 chr2L 13693008 intron CG31814 - chr2L 13693070 intron CG31814 - chr2L 13693133 intron CG31814 - chr2L_13_13690001 chr2L_13690001 RAL-492 407 chr2L 13713240 13713260 chr2L 13713372 13713392 8 131 5.5 3.5 4.5 1.5 152 chr2L 13713240 intron CG31814 - chr2L 13713316 intron CG31814 - chr2L 13713392 intron CG31814 - chr2L_8_13710001 chr2L_13710001 RAL-492 408 chr2L 13836790 13836827 chr2L 13837004 13837042 14 213 3.5 7.0 5.2 2.3 252 chr2L 13836790 intron CenG1A + chr2L 13836916 intron CenG1A + chr2L 13837042 intron CenG1A + chr2L_14_13835001 chr2L_13835001 RAL-492 409 chr2L 13842113 13842159 chr2L 13842216 13842263 9 104 3.0 1.0 2.0 3.0 150 chr2L 13842113 intron CenG1A + chr2L 13842188 intron CenG1A + chr2L 13842263 intron CenG1A + chr2L_9_13840001 chr2L_13840001 RAL-492 410 chr2L 13853075 13853115 chr2L 13862245 13862285 roo 14 9168 4.0 9.5 6.8 1.8 9210 chr2L 13853075 intron CenG1A + chr2L 13857680 intron CenG1A + chr2L 13862285 intron CenG1A + chr2L_14_13855001 chr2L_13855001 RAL-492 411 chr2L 13914794 13914840 chr2L 13914894 13914940 8 99 2.5 4.5 3.5 1.8 146 chr2L 13914794 5` UTR Ance-3 + chr2L 13914867 5` UTR Ance-3 + chr2L 13914940 5` UTR Ance-3 + chr2L_8_13910001 chr2L_13910001 RAL-492 412 chr2L 13972637 13972682 chr2L 13972744 13972789 7 107 1.0 2.0 1.5 2.8 152 chr2L 13972637 intron He - chr2L 13972713 intron He - chr2L 13972789 intron He - chr2L_7_13970001 chr2L_13970001 RAL-492 413 chr2L 13988268 13988302 chr2L 13988374 13988409 7 106 3.0 4.0 3.5 1.6 141 chr2L 13988268 intron rk - chr2L 13988338 intron rk - chr2L 13988409 intron rk - chr2L_7_13985001 chr2L_13985001 RAL-492 414 chr2L 13994236 13994246 chr2L 13994328 13994329 6 92 6.0 4.0 5.0 1.0 93 chr2L 13994236 intron rk - chr2L 13994282 intron rk - chr2L 13994329 intron rk - chr2L_6_13990001 chr2L_13990001 RAL-492 415 chr2L 14085816 14085816 chr2L 14085920 14085941 4 112 5.0 2.0 3.5 0.9 125 chr2L 14085816 intron nAChRalpha5 + chr2L 14085878 intron nAChRalpha5 + chr2L 14085941 intron nAChRalpha5 + chr2L_4_14085001 chr2L_14085001 RAL-492 416 chr2L 14096145 14096150 chr2L 14096255 14096261 4 110 9.5 0.0 4.8 0.7 116 chr2L 14096145 intergenic not near genes chr2L 14096203 intergenic not near genes chr2L 14096261 intergenic not near genes chr2L_4_14095001 chr2L_14095001 RAL-492 417 chr2L 14118653 14118691 chr2L 14118760 14118810 17 114 4.5 2.0 3.2 4.0 157 chr2L 14118653 intergenic not near genes chr2L 14118732 intergenic not near genes chr2L 14118810 intergenic not near genes chr2L_17_14115001 chr2L_14115001 RAL-492 418 chr2L 14135229 14135256 chr2L 14135311 14135355 8 96 4.5 0.0 2.2 2.5 126 chr2L 14135229 intron CG17341 + chr2L 14135292 intron CG17341 + chr2L 14135355 intron CG17341 + chr2L_8_14135001 chr2L_14135001 RAL-492 419 chr2L 14149715 14149745 chr2L 14149812 14149842 5 97 3.0 3.0 3.0 1.2 127 chr2L 14149715 intron CG17341 + chr2L 14149778 intron CG17341 + chr2L 14149842 intron CG17341 + chr2L_5_14145001 chr2L_14145001 RAL-492 420 chr2L 14160682 14160719 chr2L 14160775 14160824 8 104 0.0 3.5 1.8 2.9 142 chr2L 14160682 intergenic CG17341 +,CG43332 - chr2L 14160753 intergenic CG17341 +,CG43332 - chr2L 14160824 intergenic CG17341 +,CG43332 - chr2L_8_14160001 chr2L_14160001 RAL-492 421 chr2L 14180042 14180088 chr2L 14180138 14180184 21 95 4.5 4.5 4.5 3.8 142 chr2L 14180042 intron CG43333 - chr2L 14180113 intron CG43333 - chr2L 14180184 intron CG43333 - chr2L_21_14180001 chr2L_14180001 RAL-492 422 chr2L 14208961 14208970 chr2L 14209279 14209296 5 326 4.5 4.5 4.5 0.9 335 chr2L 14208961 intron Dyrk2 - chr2L 14209128 intron Dyrk2 - chr2L 14209296 intron Dyrk2 - chr2L_5_14205001 chr2L_14205001 RAL-492 423 chr2L 14229606 14229641 chr2L 14229719 14229737 12 110 0.0 2.0 1.0 6.0 131 chr2L 14229606 intron Dyrk2 - chr2L 14229672 intron Dyrk2 - chr2L 14229737 intron Dyrk2 - chr2L_12_14225001 chr2L_14225001 RAL-492 424 chr2L 14291642 14291683 chr2L 14291744 14291785 8 101 4.5 2.0 3.2 1.9 143 chr2L 14291642 intron,5` UTR wb +,CR43639 + chr2L 14291714 intron,5` UTR wb +,CR43639 + chr2L 14291785 intron,5` UTR wb +,CR43639 + chr2L_8_14290001 chr2L_14290001 RAL-492 425 chr2L 14374764 14374806 chr2L 14374872 14374917 10 110 4.5 2.0 3.2 2.4 153 chr2L 14374764 intergenic not near genes chr2L 14374840 intergenic not near genes chr2L 14374917 intergenic not near genes chr2L_10_14370001 chr2L_14370001 RAL-492 426 chr2L 14403122 14403143 chr2L 14403211 14403249 4 104 3.5 3.0 3.2 1.0 127 chr2L 14403122 intron elB - chr2L 14403186 intron elB - chr2L 14403249 intron elB - chr2L_4_14400001 chr2L_14400001 RAL-492 427 chr2L 14406934 14406974 chr2L 14407030 14407070 11 95 0.5 4.0 2.2 3.4 136 chr2L 14406934 intron elB - chr2L 14407002 intron elB - chr2L 14407070 intron elB - chr2L_11_14405001 chr2L_14405001 RAL-492 428 chr2L 14423954 14423995 chr2L 14424903 14424944 15 950 32.0 38.5 35.2 0.4 990 chr2L 14423954 intergenic Cpr35B - chr2L 14424449 exon Cpr35B - chr2L 14424944 exon Cpr35B - chr2L_15_14420001 chr2L_14420001 RAL-492 429 chr2L 14427784 14427837 chr2L 14428010 14428035 15 218 3.0 4.5 3.8 3.1 251 chr2L 14427784 intergenic not near genes chr2L 14427910 intergenic not near genes chr2L 14428035 intergenic not near genes chr2L_15_14425001 chr2L_14425001 RAL-492 430 chr2L 14465596 14465603 chr2L 14469093 14469100 hopper2 5 3497 6.0 1.0 3.5 1.1 3504 chr2L 14465596 intergenic not near genes chr2L 14467348 intergenic not near genes chr2L 14469100 intergenic not near genes chr2L_5_14465001 chr2L_14465001 RAL-492 431 chr2L 14525556 14525598 chr2L 14525657 14525700 6 102 5.5 3.0 4.2 1.2 144 chr2L 14525556 exon CG33648 + chr2L 14525628 3` UTR CG33648 + chr2L 14525700 intergenic CG33648 + chr2L_6_14525001 chr2L_14525001 RAL-492 432 chr2L 14549140 14549161 chr2L 14549233 14549257 10 94 6.5 9.0 7.8 1.1 117 chr2L 14549140 intergenic CG4218 - chr2L 14549198 intergenic CG4218 - chr2L 14549257 intergenic CG4218 - chr2L_10_14545001 chr2L_14545001 RAL-492 433 chr2L 14549163 14549175 chr2L 14549232 14549270 7 91 4.0 9.0 6.5 0.9 107 chr2L 14549163 intergenic CG4218 - chr2L 14549216 intergenic CG4218 - chr2L 14549270 intergenic CG4218 - chr2L_7_14545001 chr2L_14545001 RAL-492 434 chr2L 14588370 14588419 chr2L 14588544 14588593 15 172 4.5 2.5 3.5 3.3 223 chr2L 14588370 intergenic CG42680 - chr2L 14588482 intergenic CG42680 - chr2L 14588593 intergenic CG42680 - chr2L_15_14585001 chr2L_14585001 RAL-492 435 chr2L 14601968 14602003 chr2L 14602065 14602100 11 102 2.0 4.0 3.0 2.8 132 chr2L 14601968 exon osp - chr2L 14602034 intron osp - chr2L 14602100 intron osp - chr2L_11_14600001 chr2L_14600001 RAL-492 436 chr2L 14707194 14707236 chr2L 14707332 14707334 5 127 4.0 0.0 2.0 1.7 140 chr2L 14707194 intergenic not near genes chr2L 14707264 intergenic not near genes chr2L 14707334 intergenic not near genes chr2L_5_14705001 chr2L_14705001 RAL-492 437 chr2L 14716583 14716629 chr2L 14716681 14716686 12 88 4.0 4.5 4.2 2.3 103 chr2L 14716583 intergenic not near genes chr2L 14716634 intergenic not near genes chr2L 14716686 intergenic not near genes chr2L_12_14715001 chr2L_14715001 RAL-492 438 chr2L 14761890 14761908 chr2L 14762008 14762026 9 118 3.0 5.0 4.0 1.8 136 chr2L 14761890 3` UTR CG4691 + chr2L 14761958 intergenic CR44858 +,CG4691 + chr2L 14762026 5` UTR CR44858 + chr2L_9_14760001 chr2L_14760001 RAL-492 439 chr2L 14794284 14794316 chr2L 14794515 14794550 9 233 2.0 5.5 3.8 1.9 266 chr2L 14794284 intergenic CG18420 - chr2L 14794417 intergenic CG18420 - chr2L 14794550 3` UTR CG18420 - chr2L_9_14790001 chr2L_14790001 RAL-492 440 chr2L 14803863 14803911 chr2L 14809086 14809134 copia 14 5216 3.5 5.5 4.5 2.5 5271 chr2L 14803863 intergenic not near genes chr2L 14806498 intergenic not near genes chr2L 14809134 intergenic not near genes chr2L_14_14805001 chr2L_14805001 RAL-492 441 chr2L 14833779 14833789 chr2L 14833900 14833913 4 123 1.0 5.0 3.0 1.0 134 chr2L 14833779 intergenic not near genes chr2L 14833846 intergenic not near genes chr2L 14833913 intergenic not near genes chr2L_4_14830001 chr2L_14830001 RAL-492 442 chr2L 14833793 14833813 chr2L 14833897 14833937 5 120 1.0 4.0 2.5 1.4 144 chr2L 14833793 intergenic not near genes chr2L 14833865 intergenic not near genes chr2L 14833937 intergenic not near genes chr2L_5_14830001 chr2L_14830001 RAL-492 443 chr2L 14840973 14840987 chr2L 14841080 14841093 7 106 5.5 5.5 5.5 1.1 120 chr2L 14840973 3` UTR CR43805 - chr2L 14841033 3` UTR CR43805 - chr2L 14841093 3` UTR CR43805 - chr2L_7_14840001 chr2L_14840001 RAL-492 444 chr2L 14858542 14858585 chr2L 14858643 14858685 4 101 7.5 3.0 5.2 0.6 143 chr2L 14858542 intergenic not near genes chr2L 14858614 intergenic not near genes chr2L 14858685 intergenic not near genes chr2L_4_14855001 chr2L_14855001 RAL-492 445 chr2L 14884670 14884701 chr2L 14884766 14884798 6 96 1.5 5.0 3.2 1.4 128 chr2L 14884670 intergenic CR45302 + chr2L 14884734 intergenic CR45302 + chr2L 14884798 intergenic CR45302 + chr2L_6_14880001 chr2L_14880001 RAL-492 446 chr2L 14889936 14889976 chr2L 14890377 14890421 jockey 10 445 2.5 3.5 3.0 2.5 485 chr2L 14889936 intergenic not near genes chr2L 14890178 intergenic not near genes chr2L 14890421 intergenic not near genes chr2L_10_14890001 chr2L_14890001 RAL-492 447 chr2L 14902144 14902190 chr2L 14904205 14904220 5 2055 4.0 3.5 3.8 1.0 2076 chr2L 14902144 intergenic not near genes chr2L 14903182 intergenic not near genes chr2L 14904220 intergenic not near genes chr2L_5_14900001 chr2L_14900001 RAL-492 448 chr2L 14939632 14939639 chr2L 14939779 14939786 5 147 4.0 5.0 4.5 0.9 154 chr2L 14939632 intron CG42313 - chr2L 14939709 intron CG42313 - chr2L 14939786 intron CG42313 - chr2L_5_14935001 chr2L_14935001 RAL-492 449 chr2L 14939641 14939675 chr2L 14939778 14939822 7 142 2.0 4.5 3.2 1.7 181 chr2L 14939641 intron CG42313 - chr2L 14939732 intron CG42313 - chr2L 14939822 intron CG42313 - chr2L_7_14935001 chr2L_14935001 RAL-492 450 chr2L 14945423 14945447 chr2L 14945539 14945562 9 115 3.0 1.5 2.2 2.8 139 chr2L 14945423 intron CG42313 - chr2L 14945492 intron CG42313 - chr2L 14945562 intron CG42313 - chr2L_9_14945001 chr2L_14945001 RAL-492 451 chr2L 14984367 14984374 chr2L 14991989 14991994 opus 4 7622 8.0 4.5 6.2 0.6 7627 chr2L 14984367 intron mol - chr2L 14988180 intron mol - chr2L 14991994 intron mol - chr2L_4_14985001 chr2L_14985001 RAL-492 452 chr2L 14996408 14996459 chr2L 14996514 14996561 19 105 3.5 2.5 3.0 4.8 153 chr2L 14996408 intron mol - chr2L 14996484 intron mol - chr2L 14996561 intron mol - chr2L_19_14995001 chr2L_14995001 RAL-492 453 chr2L 14999956 15000006 chr2L 15000110 15000162 10 156 3.0 3.5 3.2 2.4 206 chr2L 14999956 intergenic not near genes chr2L 15000059 intergenic not near genes chr2L 15000162 intergenic not near genes chr2L_10_15000001 chr2L_15000001 RAL-492 454 chr2L 15024070 15024100 chr2L 15024166 15024196 6 96 2.5 2.0 2.2 1.9 126 chr2L 15024070 intron GABA-B-R1 + chr2L 15024133 intron GABA-B-R1 + chr2L 15024196 intron GABA-B-R1 + chr2L_6_15020001 chr2L_15020001 RAL-492 455 chr2L 15066593 15066603 chr2L 15066673 15066716 6 106 4.5 4.5 4.5 1.1 123 chr2L 15066593 intron,intron vas +,vig - chr2L 15066654 intron,intron vas +,vig - chr2L 15066716 intron,intron vas +,vig - chr2L_6_15065001 chr2L_15065001 RAL-492 456 chr2L 15087735 15087761 chr2L 15087865 15087891 11 129 4.0 4.5 4.2 2.1 156 chr2L 15087735 exon CG15270 + chr2L 15087813 intron CG15270 + chr2L 15087891 intron CG15270 + chr2L_11_15085001 chr2L_15085001 RAL-492 457 chr2L 15142018 15142055 chr2L 15142116 15142154 6 98 4.0 2.0 3.0 1.5 136 chr2L 15142018 intergenic not near genes chr2L 15142086 intergenic not near genes chr2L 15142154 intergenic not near genes chr2L_6_15140001 chr2L_15140001 RAL-492 458 chr2L 15226361 15226394 chr2L 15226454 15226489 7 82 1.0 4.0 2.5 2.0 128 chr2L 15226361 intergenic not near genes chr2L 15226425 intergenic not near genes chr2L 15226489 intergenic not near genes chr2L_7_15225001 chr2L_15225001 RAL-492 459 chr2L 15242630 15242658 chr2L 15242718 15242757 5 90 0.0 3.0 1.5 2.0 127 chr2L 15242630 intron ZnT35C - chr2L 15242694 intron ZnT35C - chr2L 15242757 intron ZnT35C - chr2L_5_15240001 chr2L_15240001 RAL-492 460 chr2L 15252962 15253003 chr2L 15253060 15253100 9 98 2.0 2.5 2.2 2.8 138 chr2L 15252962 intron dao + chr2L 15253031 intron dao + chr2L 15253100 intron dao + chr2L_9_15250001 chr2L_15250001 RAL-492 461 chr2L 15313735 15313754 chr2L 15313876 15313893 4 140 4.0 9.0 6.5 0.5 158 chr2L 15313735 intergenic not near genes chr2L 15313814 intergenic not near genes chr2L 15313893 intergenic not near genes chr2L_4_15310001 chr2L_15310001 RAL-492 462 chr2L 15313766 15313771 chr2L 15313865 15313898 5 123 2.5 7.5 5.0 0.8 132 chr2L 15313766 intergenic not near genes chr2L 15313832 intergenic not near genes chr2L 15313898 intergenic not near genes chr2L_5_15310001 chr2L_15310001 RAL-492 463 chr2L 15350883 15350928 chr2L 15350981 15351032 15 103 3.5 2.0 2.8 3.9 149 chr2L 15350883 intergenic not near genes chr2L 15350958 intergenic not near genes chr2L 15351032 intergenic not near genes chr2L_15_15350001 chr2L_15350001 RAL-492 464 chr2L 15375216 15375263 chr2L 15375350 15375396 12 124 3.5 2.0 2.8 3.2 180 chr2L 15375216 intergenic not near genes chr2L 15375306 intergenic not near genes chr2L 15375396 intergenic not near genes chr2L_12_15375001 chr2L_15375001 RAL-492 465 chr2L 15375817 15375834 chr2L 15375949 15375966 5 132 0.0 1.5 0.8 2.8 149 chr2L 15375817 intergenic not near genes chr2L 15375892 intergenic not near genes chr2L 15375966 intergenic not near genes chr2L_5_15375001 chr2L_15375001 RAL-492 466 chr2L 15385262 15385297 chr2L 15385533 15385568 7 268 5.0 0.0 2.5 2.0 306 chr2L 15385262 intergenic not near genes chr2L 15385415 intergenic not near genes chr2L 15385568 intergenic not near genes chr2L_7_15385001 chr2L_15385001 RAL-492 467 chr2L 15387352 15387404 chr2L 15387452 15387504 4 100 3.5 0.0 1.8 1.4 152 chr2L 15387352 intergenic not near genes chr2L 15387428 intergenic not near genes chr2L 15387504 intergenic not near genes chr2L_4_15385001 chr2L_15385001 RAL-492 468 chr2L 15394167 15394188 chr2L 15394273 15394294 6 104 3.5 0.0 1.8 2.1 127 chr2L 15394167 intergenic not near genes chr2L 15394230 intergenic not near genes chr2L 15394294 intergenic not near genes chr2L_6_15390001 chr2L_15390001 RAL-492 469 chr2L 15446042 15446077 chr2L 15453521 15453566 blood 9 7484 3.0 4.0 3.5 2.0 7524 chr2L 15446042 intergenic not near genes chr2L 15449804 intergenic not near genes chr2L 15453566 intergenic not near genes chr2L_9_15445001 chr2L_15445001 RAL-492 470 chr2L 15471237 15471275 chr2L 15471349 15471387 6 112 3.0 1.0 2.0 2.0 150 chr2L 15471237 intergenic not near genes chr2L 15471312 intergenic not near genes chr2L 15471387 intergenic not near genes chr2L_6_15470001 chr2L_15470001 RAL-492 471 chr2L 15476384 15476407 chr2L 15476563 15476585 4 179 3.0 2.5 2.8 1.1 201 chr2L 15476384 intergenic sna - chr2L 15476484 intergenic sna - chr2L 15476585 intergenic sna - chr2L_4_15475001 chr2L_15475001 RAL-492 472 chr2L 15483273 15483313 chr2L 15483377 15483418 5 105 2.0 0.5 1.2 2.3 145 chr2L 15483273 intergenic not near genes chr2L 15483346 intergenic not near genes chr2L 15483418 intergenic not near genes chr2L_5_15480001 chr2L_15480001 RAL-492 473 chr2L 15490027 15490044 chr2L 15490163 15490180 5 136 0.0 2.5 1.2 2.3 153 chr2L 15490027 intergenic not near genes chr2L 15490104 intergenic not near genes chr2L 15490180 intergenic not near genes chr2L_5_15490001 chr2L_15490001 RAL-492 474 chr2L 15499896 15499945 chr2L 15500004 15500046 5 106 1.5 2.5 2.0 1.7 150 chr2L 15499896 intron lace + chr2L 15499971 intron lace + chr2L 15500046 intron lace + chr2L_5_15495001 chr2L_15495001 RAL-492 475 chr2L 15521625 15521642 chr2L 15521715 15521745 5 97 4.5 2.5 3.5 1.1 120 chr2L 15521625 intergenic CR43761 + chr2L 15521685 intergenic CR43761 + chr2L 15521745 intergenic CR43761 + chr2L_5_15520001 chr2L_15520001 RAL-492 476 chr2L 15533246 15533288 chr2L 15533341 15533383 8 90 5.5 3.0 4.2 1.5 137 chr2L 15533246 intergenic not near genes chr2L 15533314 intergenic not near genes chr2L 15533383 intergenic not near genes chr2L_8_15530001 chr2L_15530001 RAL-492 477 chr2L 15541331 15541376 chr2L 15541433 15541478 9 100 3.5 3.0 3.2 2.1 147 chr2L 15541331 intergenic not near genes chr2L 15541404 intergenic not near genes chr2L 15541478 intergenic not near genes chr2L_9_15540001 chr2L_15540001 RAL-492 478 chr2L 15555178 15555201 chr2L 15555325 15555348 8 147 3.5 3.0 3.2 1.9 170 chr2L 15555178 intron kek3 + chr2L 15555263 intron kek3 + chr2L 15555348 intron kek3 + chr2L_8_15555001 chr2L_15555001 RAL-492 479 chr2L 15584286 15584310 chr2L 15584359 15584409 7 89 3.5 4.5 4.0 1.4 123 chr2L 15584286 intergenic kek3 + chr2L 15584348 intergenic kek3 + chr2L 15584409 intergenic kek3 + chr2L_7_15580001 chr2L_15580001 RAL-492 480 chr2L 15586393 15586424 chr2L 15593465 15593495 297 6 7072 4.5 3.5 4.0 1.2 7102 chr2L 15586393 intergenic not near genes chr2L 15589944 intergenic not near genes chr2L 15593495 intergenic not near genes chr2L_6_15585001 chr2L_15585001 RAL-492 481 chr2L 15790177 15790209 chr2L 15790270 15790302 5 95 1.5 5.0 3.2 1.2 125 chr2L 15790177 intergenic CG18109 + chr2L 15790240 intergenic CG18109 + chr2L 15790302 intergenic CG18109 + chr2L_5_15790001 chr2L_15790001 RAL-492 482 chr2L 15823340 15823372 chr2L 15823436 15823468 7 95 2.5 1.5 2.0 2.3 128 chr2L 15823340 intergenic CR44601 - chr2L 15823404 intergenic CR44601 - chr2L 15823468 intergenic not near genes chr2L_7_15820001 chr2L_15820001 RAL-492 483 chr2L 15917866 15917909 chr2L 15917965 15918006 9 95 18.5 14.5 16.5 0.5 140 chr2L 15917866 intron beat-Ib - chr2L 15917936 intron beat-Ib - chr2L 15918006 intron beat-Ib - chr2L_9_15915001 chr2L_15915001 RAL-492 484 chr2L 15935179 15935210 chr2L 15935282 15935320 4 107 2.5 2.5 2.5 1.1 141 chr2L 15935179 intron beat-Ib - chr2L 15935250 intron beat-Ib - chr2L 15935320 intron beat-Ib - chr2L_4_15935001 chr2L_15935001 RAL-492 485 chr2L 15956005 15956055 chr2L 15957492 15957525 hobo 8 1485 6.0 3.0 4.5 1.5 1520 chr2L 15956005 intron beat-Ib - chr2L 15956765 intron beat-Ib - chr2L 15957525 intron beat-Ib - chr2L_8_15955001 chr2L_15955001 RAL-492 486 chr2L 16005548 16005572 chr2L 16005670 16005694 4 122 4.0 4.0 4.0 0.8 146 chr2L 16005548 intron beat-Ic + chr2L 16005621 intron beat-Ic + chr2L 16005694 intron beat-Ic + chr2L_4_16005001 chr2L_16005001 RAL-492 487 chr2L 16069251 16069288 chr2L 16069352 16069367 5 93 5.0 6.5 5.8 0.7 116 chr2L 16069251 intron beat-Ia + chr2L 16069309 intron beat-Ia + chr2L 16069367 intron beat-Ia + chr2L_5_16065001 chr2L_16065001 RAL-492 488 chr2L 10176023 10176024 chr2L 16071771 16071771 4 5895747 24.5 20.0 22.2 0.2 5895748 chr2L 10176023 intron CG44153 - chr2L 13123897 intergenic not near genes chr2L 16071771 intron beat-Ia + chr2L_4_13120001 chr2L_13120001 RAL-492 489 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 26 145889 21.0 23.5 22.2 1.1 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_26_16140001 chr2L_16140001 RAL-492 490 chr2L 16098907 16098950 chr2L 16099013 16099056 13 107 4.0 4.5 4.2 2.5 149 chr2L 16098907 intergenic not near genes chr2L 16098982 intergenic not near genes chr2L 16099056 intergenic not near genes chr2L_13_16095001 chr2L_16095001 RAL-492 491 chr2L 16141148 16141186 chr2L 16146374 16146412 copia 5 5227 4.5 4.0 4.2 1.0 5264 chr2L 16141148 intergenic not near genes chr2L 16143780 intergenic not near genes chr2L 16146412 intergenic not near genes chr2L_5_16140001 chr2L_16140001 RAL-492 492 chr2L 16153744 16153760 chr2L 16160817 16160848 297 4 7078 4.5 4.0 4.2 0.8 7104 chr2L 16153744 intergenic not near genes chr2L 16157296 intergenic not near genes chr2L 16160848 intergenic not near genes chr2L_4_16155001 chr2L_16155001 RAL-492 493 chr2L 16210493 16210508 chr2L 16210592 16210598 4 97 0.0 5.0 2.5 1.1 105 chr2L 16210493 intergenic not near genes chr2L 16210546 intergenic not near genes chr2L 16210598 intergenic not near genes chr2L_4_16210001 chr2L_16210001 RAL-492 494 chr2L 9084336 9084340 chr2L 16217660 16217660 11 7133321 18.5 23.5 21.0 0.5 7133324 chr2L 9084336 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_11_12650001 chr2L_12650001 RAL-492 495 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 22 145889 21.0 23.5 22.2 0.9 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_22_16140001 chr2L_16140001 RAL-492 496 chr2L 16280236 16280287 chr2L 16281423 16281467 1360 18 1184 3.0 4.0 3.5 4.0 1231 chr2L 16280236 intron crp - chr2L 16280852 intron crp - chr2L 16281467 intron crp - chr2L_18_16280001 chr2L_16280001 RAL-492 497 chr2L 16363944 16363970 chr2L 16364210 16364232 8 264 1.5 5.0 3.2 1.9 288 chr2L 16363944 intergenic not near genes chr2L 16364088 intergenic not near genes chr2L 16364232 intergenic not near genes chr2L_8_16360001 chr2L_16360001 RAL-492 498 chr2L 16375374 16375398 chr2L 16375485 16375507 4 105 9.0 0.0 4.5 0.7 133 chr2L 16375374 intergenic not near genes chr2L 16375440 intergenic not near genes chr2L 16375507 intergenic not near genes chr2L_4_16375001 chr2L_16375001 RAL-492 499 chr2L 16391793 16391832 chr2L 16391889 16391928 4 96 3.0 0.5 1.8 1.4 135 chr2L 16391793 intergenic not near genes chr2L 16391860 intergenic not near genes chr2L 16391928 intergenic not near genes chr2L_4_16390001 chr2L_16390001 RAL-492 500 chr2L 16408105 16408154 chr2L 16408232 16408276 4 121 0.0 2.0 1.0 2.0 171 chr2L 16408105 intron CG5888 - chr2L 16408190 intron CG5888 - chr2L 16408276 intron CG5888 - chr2L_4_16405001 chr2L_16405001 RAL-492 501 chr2L 16487888 16487927 chr2L 16488018 16488056 8 130 2.5 5.5 4.0 1.6 168 chr2L 16487888 intergenic CG4580 + chr2L 16487972 intergenic CG4580 + chr2L 16488056 intergenic CG4580 + chr2L_8_16485001 chr2L_16485001 RAL-492 502 chr2L 16504979 16505015 chr2L 16505108 16505144 10 129 0.0 3.0 1.5 4.0 165 chr2L 16504979 intron Tpr2 + chr2L 16505062 intron Tpr2 + chr2L 16505144 intron Tpr2 + chr2L_10_16505001 chr2L_16505001 RAL-492 503 chr2L 16511943 16511992 chr2L 16519077 16519126 HMS-Beagle 4 7134 0.5 1.0 0.8 2.2 7183 chr2L 16511943 intron CG5953 - chr2L 16515534 intron CG5953 - chr2L 16519126 intron CG5953 - chr2L_4_16515001 chr2L_16515001 RAL-492 504 chr2L 16563582 16563620 chr2L 16563689 16563689 8 99 1.5 4.5 3.0 2.0 107 chr2L 16563582 intron CG42389 + chr2L 16563636 intron CG42389 + chr2L 16563689 intron CG42389 + chr2L_8_16560001 chr2L_16560001 RAL-492 505 chr2L 16570853 16570874 chr2L 16570925 16570970 4 90 0.5 1.5 1.0 2.0 117 chr2L 16570853 intron CG42389 + chr2L 16570912 intron CG42389 + chr2L 16570970 intron CG42389 + chr2L_4_16570001 chr2L_16570001 RAL-492 506 chr2L 16589806 16589822 chr2L 16589916 16589932 8 109 3.5 3.5 3.5 1.8 126 chr2L 16589806 intron CG42389 + chr2L 16589869 intron CG42389 + chr2L 16589932 intron CG42389 + chr2L_8_16585001 chr2L_16585001 RAL-492 507 chr2L 16600213 16600237 chr2L 16600354 16600378 8 141 6.5 5.0 5.8 1.2 165 chr2L 16600213 intron CG42389 + chr2L 16600296 intron CG42389 + chr2L 16600378 intron CG42389 + chr2L_8_16600001 chr2L_16600001 RAL-492 508 chr2L 16600241 16600259 chr2L 16600352 16600386 8 126 3.5 5.0 4.2 1.5 145 chr2L 16600241 intron CG42389 + chr2L 16600314 intron CG42389 + chr2L 16600386 intron CG42389 + chr2L_8_16600001 chr2L_16600001 RAL-492 509 chr2L 16616563 16616612 chr2L 16616666 16616716 13 98 6.0 7.0 6.5 1.7 153 chr2L 16616563 intron CG42389 + chr2L 16616640 intron CG42389 + chr2L 16616716 intron CG42389 + chr2L_13_16615001 chr2L_16615001 RAL-492 510 chr2L 16670413 16670429 chr2L 16670508 16670526 10 96 3.0 4.5 3.8 2.1 113 chr2L 16670413 intron Trpgamma - chr2L 16670470 intron Trpgamma - chr2L 16670526 intron Trpgamma - chr2L_10_16670001 chr2L_16670001 RAL-492 511 chr2L 16670437 16670449 chr2L 16670495 16670546 5 88 2.0 3.5 2.8 1.3 109 chr2L 16670437 intron Trpgamma - chr2L 16670492 intron Trpgamma - chr2L 16670546 intron Trpgamma - chr2L_5_16670001 chr2L_16670001 RAL-492 512 chr2L 16694125 16694164 chr2L 16694222 16694258 6 96 4.5 4.5 4.5 1.1 133 chr2L 16694125 intron grp + chr2L 16694192 intron grp + chr2L 16694258 intron grp + chr2L_6_16690001 chr2L_16690001 RAL-492 513 chr2L 16695257 16695276 chr2L 16695350 16695379 6 101 3.0 1.0 2.0 2.0 122 chr2L 16695257 intron grp + chr2L 16695318 intron grp + chr2L 16695379 intron grp + chr2L_6_16695001 chr2L_16695001 RAL-492 514 chr2L 16697052 16697068 chr2L 16697265 16697281 5 213 3.5 3.5 3.5 1.1 229 chr2L 16697052 intron grp + chr2L 16697166 intron grp + chr2L 16697281 intron grp + chr2L_5_16695001 chr2L_16695001 RAL-492 515 chr2L 16764948 16764997 chr2L 16765048 16765097 11 100 3.0 2.0 2.5 3.1 149 chr2L 16764948 intergenic not near genes chr2L 16765022 intergenic not near genes chr2L 16765097 intergenic not near genes chr2L_11_16765001 chr2L_16765001 RAL-492 516 chr2L 16809640 16809660 chr2L 16809788 16809808 5 148 0.0 0.0 0.0 5.0 168 chr2L 16809640 intron,intron CG13280 -,CG13272 + chr2L 16809724 intron,intron CG13280 -,CG13272 + chr2L 16809808 intron,intron CG13280 -,CG13272 + chr2L_5_16805001 chr2L_16805001 RAL-492 517 chr2L 16840998 16841042 chr2L 16841095 16841127 7 92 3.0 1.0 2.0 2.3 129 chr2L 16840998 intron,intron SclA +,SclB + chr2L 16841062 intron,intron SclA +,SclB + chr2L 16841127 intron,intron SclA +,SclB + chr2L_7_16840001 chr2L_16840001 RAL-492 518 chr2L 16217660 16217660 chr2L 16917619 16917619 4 699959 23.5 18.5 21.0 0.2 699959 chr2L 16217660 intergenic not near genes chr2L 16567640 intron CG42389 + chr2L 16917619 intergenic not near genes chr2L_4_16565001 chr2L_16565001 RAL-492 519 chr2L 16939994 16940014 chr2L 16940078 16940100 6 92 4.0 8.5 6.2 0.8 106 chr2L 16939994 intergenic not near genes chr2L 16940047 intergenic not near genes chr2L 16940100 intergenic not near genes chr2L_6_16940001 chr2L_16940001 RAL-492 520 chr2L 16958087 16958136 chr2L 16962895 16962941 Doc 9 4807 0.5 5.5 3.0 2.2 4854 chr2L 16958087 intergenic not near genes chr2L 16960514 intergenic not near genes chr2L 16962941 intergenic not near genes chr2L_9_16960001 chr2L_16960001 RAL-492 521 chr2L 17000102 17000152 chr2L 17000244 17000294 15 141 1.5 4.0 2.8 3.9 192 chr2L 17000102 intergenic not near genes chr2L 17000198 intergenic not near genes chr2L 17000294 intergenic not near genes chr2L_15_17000001 chr2L_17000001 RAL-492 522 chr2L 17018689 17018740 chr2L 17018784 17018836 6 95 2.5 1.5 2.0 2.0 147 chr2L 17018689 intergenic not near genes chr2L 17018762 intergenic not near genes chr2L 17018836 intergenic not near genes chr2L_6_17015001 chr2L_17015001 RAL-492 523 chr2L 17032483 17032521 chr2L 17032587 17032622 8 103 4.0 1.5 2.8 2.1 139 chr2L 17032483 intergenic not near genes chr2L 17032552 intergenic not near genes chr2L 17032622 intergenic not near genes chr2L_8_17030001 chr2L_17030001 RAL-492 524 chr2L 17087384 17087397 chr2L 17087499 17087518 4 118 1.5 2.0 1.8 1.4 134 chr2L 17087384 intergenic CG12620 + chr2L 17087451 intergenic CG12620 + chr2L 17087518 intergenic CG12620 + chr2L_4_17085001 chr2L_17085001 RAL-492 525 chr2L 17101886 17101907 chr2L 17101983 17102003 7 96 7.5 2.5 5.0 1.2 117 chr2L 17101886 intergenic not near genes chr2L 17101944 intergenic not near genes chr2L 17102003 intergenic not near genes chr2L_7_17100001 chr2L_17100001 RAL-492 526 chr2L 17120824 17120845 chr2L 17120923 17120944 9 97 6.5 3.5 5.0 1.5 120 chr2L 17120824 intergenic not near genes chr2L 17120884 intergenic not near genes chr2L 17120944 intergenic not near genes chr2L_9_17120001 chr2L_17120001 RAL-492 527 chr2L 17158728 17158752 chr2L 17158848 17158875 6 122 4.5 3.5 4.0 1.2 147 chr2L 17158728 5` UTR,exon CG34106 +,beat-IIIa + chr2L 17158802 intron,intron CG34106 +,beat-IIIa + chr2L 17158875 intron,intron CG34106 +,beat-IIIa + chr2L_6_17155001 chr2L_17155001 RAL-492 528 chr2L 17167550 17167595 chr2L 17167811 17167856 pogo 13 259 2.5 3.0 2.8 3.4 306 chr2L 17167550 intron,intron CG34106 +,beat-IIIa + chr2L 17167703 intron,intron CG34106 +,beat-IIIa + chr2L 17167856 intron,intron CG34106 +,beat-IIIa + chr2L_13_17165001 chr2L_17165001 RAL-492 529 chr2L 17199141 17199185 chr2L 17200628 17200672 hobo 9 1487 4.0 3.0 3.5 2.0 1531 chr2L 17199141 intron beat-IIIc - chr2L 17199906 intron beat-IIIc - chr2L 17200672 intron beat-IIIc - chr2L_9_17195001 chr2L_17195001 RAL-492 530 chr2L 17210643 17210672 chr2L 17210742 17210771 5 96 0.0 1.5 0.8 2.8 128 chr2L 17210643 intron beat-IIIc - chr2L 17210707 intron beat-IIIc - chr2L 17210771 intron beat-IIIc - chr2L_5_17210001 chr2L_17210001 RAL-492 531 chr2L 17226084 17226127 chr2L 17226183 17226223 4 98 4.0 2.0 3.0 1.0 139 chr2L 17226084 intron beat-IIIc - chr2L 17226154 intron beat-IIIc - chr2L 17226223 intron beat-IIIc - chr2L_4_17225001 chr2L_17225001 RAL-492 532 chr2L 17273198 17273221 chr2L 17277975 17278024 F-element 9 4796 5.5 4.0 4.8 1.6 4826 chr2L 17273198 intergenic not near genes chr2L 17275611 intergenic not near genes chr2L 17278024 intergenic not near genes chr2L_9_17275001 chr2L_17275001 RAL-492 533 chr2L 17289230 17289248 chr2L 17289329 17289347 4 98 5.0 0.0 2.5 1.1 117 chr2L 17289230 intergenic not near genes chr2L 17289288 intergenic not near genes chr2L 17289347 intergenic not near genes chr2L_4_17285001 chr2L_17285001 RAL-492 534 chr2L 17304960 17305011 chr2L 17305158 17305196 9 192 2.0 2.0 2.0 3.0 236 chr2L 17304960 intergenic not near genes chr2L 17305078 intergenic not near genes chr2L 17305196 intergenic not near genes chr2L_9_17305001 chr2L_17305001 RAL-492 535 chr2L 17310353 17310403 chr2L 17310467 17310505 8 112 0.5 2.0 1.2 3.6 152 chr2L 17310353 intergenic not near genes chr2L 17310429 intergenic not near genes chr2L 17310505 intergenic not near genes chr2L_8_17310001 chr2L_17310001 RAL-492 536 chr2L 17333570 17333611 chr2L 17333675 17333716 6 100 2.5 3.0 2.8 1.6 146 chr2L 17333570 intergenic not near genes chr2L 17333643 intergenic not near genes chr2L 17333716 intergenic not near genes chr2L_6_17330001 chr2L_17330001 RAL-492 537 chr2L 17339141 17339157 chr2L 17339238 17339254 4 97 2.0 4.0 3.0 1.0 113 chr2L 17339141 intergenic not near genes chr2L 17339198 intergenic not near genes chr2L 17339254 intergenic not near genes chr2L_4_17335001 chr2L_17335001 RAL-492 538 chr2L 17343554 17343567 chr2L 17343667 17343680 5 113 3.5 10.0 6.8 0.6 126 chr2L 17343554 intergenic not near genes chr2L 17343617 intergenic not near genes chr2L 17343680 intergenic not near genes chr2L_5_17340001 chr2L_17340001 RAL-492 539 chr2L 17415552 17415570 chr2L 17415639 17415680 12 108 4.5 2.0 3.2 2.9 128 chr2L 17415552 intron Dif - chr2L 17415616 intron Dif - chr2L 17415680 intron Dif - chr2L_12_17415001 chr2L_17415001 RAL-492 540 chr2L 17424708 17424724 chr2L 17424840 17424856 6 128 3.0 1.5 2.2 1.9 148 chr2L 17424708 intron Dif - chr2L 17424782 intron Dif - chr2L 17424856 intron Dif - chr2L_6_17420001 chr2L_17420001 RAL-492 541 chr2L 17432017 17432024 chr2L 17432144 17432151 1360 4 127 0.0 2.5 1.2 1.8 134 chr2L 17432017 intron Dif - chr2L 17432084 intron Dif - chr2L 17432151 intron Dif - chr2L_4_17430001 chr2L_17430001 RAL-492 542 chr2L 17543579 17543616 chr2L 17543689 17543726 17 108 6.0 5.5 5.8 2.5 147 chr2L 17543579 intergenic not near genes chr2L 17543652 intergenic not near genes chr2L 17543726 intergenic not near genes chr2L_17_17540001 chr2L_17540001 RAL-492 543 chr2L 17550126 17550169 chr2L 17550244 17550286 5 118 1.0 4.0 2.5 1.4 160 chr2L 17550126 intergenic not near genes chr2L 17550206 intergenic not near genes chr2L 17550286 intergenic not near genes chr2L_5_17550001 chr2L_17550001 RAL-492 544 chr2L 17562915 17562963 chr2L 17563014 17563044 9 94 1.5 1.5 1.5 3.6 129 chr2L 17562915 intergenic not near genes chr2L 17562980 intergenic not near genes chr2L 17563044 intergenic not near genes chr2L_9_17560001 chr2L_17560001 RAL-492 545 chr2L 17564142 17564168 chr2L 17564245 17564270 6 103 0.5 1.5 1.0 3.0 128 chr2L 17564142 intergenic not near genes chr2L 17564206 intergenic not near genes chr2L 17564270 intergenic not near genes chr2L_6_17560001 chr2L_17560001 RAL-492 546 chr2L 17580886 17580925 chr2L 17581760 17581799 7 866 2.0 3.0 2.5 2.0 913 chr2L 17580886 intergenic not near genes chr2L 17581342 intergenic not near genes chr2L 17581799 intergenic not near genes chr2L_7_17580001 chr2L_17580001 RAL-492 547 chr2L 17637123 17637176 chr2L 17637221 17637274 10 96 2.5 2.0 2.2 3.1 151 chr2L 17637123 intergenic not near genes chr2L 17637198 intergenic not near genes chr2L 17637274 intergenic not near genes chr2L_10_17635001 chr2L_17635001 RAL-492 548 chr2L 17687498 17687521 chr2L 17692263 17692286 F-element 10 4765 6.0 7.0 6.5 1.3 4788 chr2L 17687498 intron CadN - chr2L 17689892 intron CadN - chr2L 17692286 intron CadN - chr2L_10_17685001 chr2L_17685001 RAL-492 549 chr2L 17709099 17709152 chr2L 17709203 17709249 18 101 1.0 6.0 3.5 4.0 150 chr2L 17709099 intron CadN - chr2L 17709174 intron CadN - chr2L 17709249 intron CadN - chr2L_18_17705001 chr2L_17705001 RAL-492 550 chr2L 17710016 17710061 chr2L 17710127 17710176 14 115 2.5 3.0 2.8 3.7 160 chr2L 17710016 intron CadN - chr2L 17710096 intron CadN - chr2L 17710176 intron CadN - chr2L_14_17710001 chr2L_17710001 RAL-492 551 chr2L 17723773 17723792 chr2L 17723886 17723905 6 113 1.5 3.5 2.5 1.7 132 chr2L 17723773 intron CadN - chr2L 17723839 intron CadN - chr2L 17723905 intron CadN - chr2L_6_17720001 chr2L_17720001 RAL-492 552 chr2L 17727857 17727880 chr2L 17729344 17729344 hobo 4 1478 1.5 6.0 3.8 0.8 1487 chr2L 17727857 intron CadN - chr2L 17728600 intron CadN - chr2L 17729344 intron CadN - chr2L_4_17725001 chr2L_17725001 RAL-492 553 chr2L 17819906 17819953 chr2L 17825129 17825148 copia 5 5216 3.5 5.0 4.2 1.0 5242 chr2L 17819906 intron CadN2 - chr2L 17822527 intron CadN2 - chr2L 17825148 intron CadN2 - chr2L_5_17820001 chr2L_17820001 RAL-492 554 chr2L 17837139 17837151 chr2L 17837257 17837268 4 118 3.5 4.5 4.0 0.8 129 chr2L 17837139 intron CadN2 - chr2L 17837204 intron CadN2 - chr2L 17837268 intron CadN2 - chr2L_4_17835001 chr2L_17835001 RAL-492 555 chr2L 17837156 17837182 chr2L 17837252 17837263 6 109 1.5 3.5 2.5 1.7 107 chr2L 17837156 intron CadN2 - chr2L 17837210 intron CadN2 - chr2L 17837263 intron CadN2 - chr2L_6_17835001 chr2L_17835001 RAL-492 556 chr2L 17867870 17867912 chr2L 17868028 17868074 9 160 2.5 3.5 3.0 2.2 204 chr2L 17867870 intron CadN2 - chr2L 17867972 intron CadN2 - chr2L 17868074 intron CadN2 - chr2L_9_17865001 chr2L_17865001 RAL-492 557 chr2L 17898673 17898694 chr2L 17898841 17898862 8 167 3.5 6.0 4.8 1.4 189 chr2L 17898673 intergenic not near genes chr2L 17898768 intergenic not near genes chr2L 17898862 intergenic not near genes chr2L_8_17895001 chr2L_17895001 RAL-492 558 chr2L 17906763 17906781 chr2L 17906848 17906883 7 100 4.0 5.5 4.8 1.2 120 chr2L 17906763 intergenic not near genes chr2L 17906823 intergenic not near genes chr2L 17906883 intergenic not near genes chr2L_7_17905001 chr2L_17905001 RAL-492 559 chr2L 17911945 17911977 chr2L 17914143 17914175 pogo 8 2193 4.5 4.5 4.5 1.5 2230 chr2L 17911945 intergenic not near genes chr2L 17913060 intergenic not near genes chr2L 17914175 intergenic CG43271 - chr2L_8_17910001 chr2L_17910001 RAL-492 560 chr2L 17943590 17943628 chr2L 17943679 17943724 9 95 4.5 5.0 4.8 1.6 134 chr2L 17943590 intergenic not near genes chr2L 17943657 intergenic not near genes chr2L 17943724 intergenic not near genes chr2L_9_17940001 chr2L_17940001 RAL-492 561 chr2L 17951923 17951968 chr2L 17953410 17953455 hobo 13 1484 5.0 3.0 4.0 2.6 1532 chr2L 17951923 intergenic CR44398 -,CR44397 - chr2L 17952689 intergenic not near genes chr2L 17953455 intergenic not near genes chr2L_13_17950001 chr2L_17950001 RAL-492 562 chr2L 18044228 18044278 chr2L 18044573 18044626 9 344 2.5 2.5 2.5 2.6 398 chr2L 18044228 intron rdo + chr2L 18044427 intron rdo + chr2L 18044626 intron rdo + chr2L_9_18040001 chr2L_18040001 RAL-492 563 chr2L 18051854 18051901 chr2L 18061021 18061063 roo 8 9159 7.5 3.0 5.2 1.3 9209 chr2L 18051854 intron rdo + chr2L 18056458 intron rdo + chr2L 18061063 intron rdo + chr2L_8_18055001 chr2L_18055001 RAL-492 564 chr2L 18087604 18087639 chr2L 18087808 18087843 8 203 6.5 3.0 4.8 1.4 239 chr2L 18087604 intergenic not near genes chr2L 18087724 intergenic not near genes chr2L 18087843 intergenic not near genes chr2L_8_18085001 chr2L_18085001 RAL-492 565 chr2L 18095571 18095591 chr2L 18095672 18095681 12 100 8.0 3.5 5.8 1.8 110 chr2L 18095571 intergenic not near genes chr2L 18095626 intergenic not near genes chr2L 18095681 intergenic not near genes chr2L_12_18095001 chr2L_18095001 RAL-492 566 chr2L 18111223 18111244 chr2L 18111334 18111355 7 110 9.0 9.5 9.2 0.7 132 chr2L 18111223 intergenic not near genes chr2L 18111289 intergenic not near genes chr2L 18111355 intergenic not near genes chr2L_7_18110001 chr2L_18110001 RAL-492 567 chr2L 18143455 18143494 chr2L 18143549 18143550 4 87 6.5 5.5 6.0 0.6 95 chr2L 18143455 intron Socs36E - chr2L 18143502 intron Socs36E - chr2L 18143550 intron Socs36E - chr2L_4_18140001 chr2L_18140001 RAL-492 568 chr2L 18159719 18159750 chr2L 18162261 18162267 4 2524 13.0 11.5 12.2 0.3 2548 chr2L 18159719 intergenic CG42750 -,CG7200 - chr2L 18160993 3` UTR CG42750 - chr2L 18162267 intron CG42750 - chr2L_4_18160001 chr2L_18160001 RAL-492 569 chr2L 18281759 18281799 chr2L 18281866 18281901 4 103 2.5 2.5 2.5 1.1 142 chr2L 18281759 intergenic not near genes chr2L 18281830 intergenic not near genes chr2L 18281901 intergenic not near genes chr2L_4_18280001 chr2L_18280001 RAL-492 570 chr2L 18307878 18307916 chr2L 18307973 18308013 10 96 2.5 2.0 2.2 3.1 135 chr2L 18307878 intergenic CR43353 - chr2L 18307946 intergenic CR43353 - chr2L 18308013 intergenic CR43353 - chr2L_10_18305001 chr2L_18305001 RAL-492 571 chr2L 16217660 16217660 chr2L 18331928 18331928 F-element 4 2114268 23.5 6.5 15.0 0.2 2114268 chr2L 16217660 intergenic not near genes chr2L 17274794 intergenic not near genes chr2L 18331928 intron Fas3 + chr2L_4_17270001 chr2L_17270001 RAL-492 572 chr2L 18380202 18380241 chr2L 18380310 18380349 12 105 2.0 9.0 5.5 1.8 147 chr2L 18380202 intron Fas3 + chr2L 18380276 intron Fas3 + chr2L 18380349 intron Fas3 + chr2L_12_18380001 chr2L_18380001 RAL-492 573 chr2L 18408008 18408038 chr2L 18412812 18412841 Doc 9 4804 8.0 0.0 4.0 1.8 4833 chr2L 18408008 intergenic not near genes chr2L 18410424 intergenic not near genes chr2L 18412841 intergenic not near genes chr2L_9_18410001 chr2L_18410001 RAL-492 574 chr2L 18442344 18442376 chr2L 18442443 18442475 10 96 0.0 5.5 2.8 2.6 131 chr2L 18442344 3` UTR RpS26 - chr2L 18442410 3` UTR RpS26 - chr2L 18442475 3` UTR RpS26 - chr2L_10_18440001 chr2L_18440001 RAL-492 575 chr2L 18462346 18462478 chr2L 18462476 18462576 4 121 0.0 0.0 0.0 4.0 230 chr2L 18462346 intron let-7-C + chr2L 18462461 intron let-7-C + chr2L 18462576 intron let-7-C + chr2L_4_18460001 chr2L_18460001 RAL-492 576 chr2L 18480799 18480818 chr2L 18480883 18480921 8 95 8.0 9.0 8.5 0.8 122 chr2L 18480799 intron CG10283 - chr2L 18480860 intron CG10283 - chr2L 18480921 intron CG10283 - chr2L_8_18480001 chr2L_18480001 RAL-492 577 chr2L 18537919 18537947 chr2L 18538003 18538007 6 85 3.5 9.0 6.2 0.8 88 chr2L 18537919 intron Pde11 - chr2L 18537963 intron Pde11 - chr2L 18538007 intron Pde11 - chr2L_6_18535001 chr2L_18535001 RAL-492 578 chr2L 18554309 18554313 chr2L 18554404 18554415 4 97 6.5 4.0 5.2 0.6 106 chr2L 18554309 intron Pde11 - chr2L 18554362 intron Pde11 - chr2L 18554415 intron Pde11 - chr2L_4_18550001 chr2L_18550001 RAL-492 579 chr2L 16217660 16217660 chr2L 18622718 18622719 4 2405058 23.5 19.5 21.5 0.2 2405059 chr2L 16217660 intergenic not near genes chr2L 17420190 intron Dif - chr2L 18622719 intron MESR3 + chr2L_4_17420001 chr2L_17420001 RAL-492 580 chr2L 18659910 18659961 chr2L 18660013 18660046 11 101 4.0 5.0 4.5 2.0 136 chr2L 18659910 intron MESR3 + chr2L 18659978 intron MESR3 + chr2L 18660046 intron MESR3 + chr2L_11_18655001 chr2L_18655001 RAL-492 581 chr2L 18678373 18678400 chr2L 18678474 18678504 4 104 0.0 5.0 2.5 1.1 131 chr2L 18678373 intron CG31751 + chr2L 18678438 intron CG31751 + chr2L 18678504 intron CG31751 + chr2L_4_18675001 chr2L_18675001 RAL-492 582 chr2L 18816723 18816772 chr2L 18816875 18816922 21 150 5.5 6.5 6.0 3.0 199 chr2L 18816723 intergenic not near genes chr2L 18816822 intergenic not near genes chr2L 18816922 intergenic not near genes chr2L_21_18815001 chr2L_18815001 RAL-492 583 chr2L 18883833 18883850 chr2L 18883934 18883952 4 101 6.5 4.0 5.2 0.6 119 chr2L 18883833 intergenic not near genes chr2L 18883892 intergenic not near genes chr2L 18883952 intergenic not near genes chr2L_4_18880001 chr2L_18880001 RAL-492 584 chr2L 18883857 18883889 chr2L 18883933 18883944 11 94 4.5 4.0 4.2 2.1 87 chr2L 18883857 intergenic not near genes chr2L 18883900 intergenic not near genes chr2L 18883944 intergenic not near genes chr2L_11_18880001 chr2L_18880001 RAL-492 585 chr2L 18902625 18902644 chr2L 18902926 18902944 6 301 5.0 1.5 3.2 1.4 319 chr2L 18902625 intergenic not near genes chr2L 18902784 intergenic not near genes chr2L 18902944 intergenic not near genes chr2L_6_18900001 chr2L_18900001 RAL-492 586 chr2L 18903076 18903116 chr2L 18903193 18903233 10 114 6.0 3.0 4.5 1.8 157 chr2L 18903076 intergenic not near genes chr2L 18903154 intergenic not near genes chr2L 18903233 intergenic not near genes chr2L_10_18900001 chr2L_18900001 RAL-492 587 chr2L 18926570 18926592 chr2L 18926687 18926719 5 124 1.0 0.0 0.5 3.3 149 chr2L 18926570 intron ssp3 - chr2L 18926644 intron ssp3 - chr2L 18926719 intron ssp3 - chr2L_5_18925001 chr2L_18925001 RAL-492 588 chr2L 19024096 19024097 chr2L 21768291 21768292 4 2744195 14.5 33.0 23.8 0.2 2744196 chr2L 19024096 3` UTR CR43700 - chr2L 20396194 intron CG10947 - chr2L 21768292 intron CG31612 - chr2L_4_20395001 chr2L_20395001 RAL-492 589 chr2L 19070278 19070294 chr2L 19070361 19070406 5 88 3.5 1.5 2.5 1.4 128 chr2L 19070278 intergenic CG10702 - chr2L 19070342 intergenic CG10702 - chr2L 19070406 intergenic not near genes chr2L_5_19070001 chr2L_19070001 RAL-492 590 chr2L 19147353 19147402 chr2L 19154406 19154457 297 9 7053 2.5 4.5 3.5 2.0 7104 chr2L 19147353 intron brat + chr2L 19150905 intron brat + chr2L 19154457 intron brat + chr2L_9_19150001 chr2L_19150001 RAL-492 591 chr2L 19163506 19163557 chr2L 19163610 19163656 13 102 4.0 5.5 4.8 2.2 150 chr2L 19163506 intron brat + chr2L 19163581 intron brat + chr2L 19163656 intron brat + chr2L_13_19160001 chr2L_19160001 RAL-492 592 chr2L 19198510 19198564 chr2L 19198607 19198661 10 93 4.5 1.0 2.8 2.6 151 chr2L 19198510 intron drl + chr2L 19198586 intron drl + chr2L 19198661 intron drl + chr2L_10_19195001 chr2L_19195001 RAL-492 593 chr2L 19246813 19246852 chr2L 19246913 19246951 9 98 2.0 5.0 3.5 2.0 138 chr2L 19246813 intergenic not near genes chr2L 19246882 intergenic not near genes chr2L 19246951 intergenic not near genes chr2L_9_19245001 chr2L_19245001 RAL-492 594 chr2L 19270911 19270926 chr2L 19271020 19271036 7 109 0.0 11.5 5.8 1.0 125 chr2L 19270911 intron CR44190 - chr2L 19270974 intron CR44190 - chr2L 19271036 intron CR44190 - chr2L_7_19270001 chr2L_19270001 RAL-492 595 chr2L 19290965 19290979 chr2L 19291087 19291120 5 133 3.5 8.5 6.0 0.7 155 chr2L 19290965 intergenic not near genes chr2L 19291042 intergenic not near genes chr2L 19291120 intergenic not near genes chr2L_5_19290001 chr2L_19290001 RAL-492 596 chr2L 19345004 19345041 chr2L 19357230 19357270 blood 9 12223 6.0 6.0 6.0 1.3 12266 chr2L 19345004 intron dnt - chr2L 19351137 intron dnt - chr2L 19357270 intron dnt - chr2L_9_19350001 chr2L_19350001 RAL-492 597 chr2L 19357527 19357569 chr2L 19357635 19357678 16 106 6.0 6.0 6.0 2.3 151 chr2L 19357527 intron dnt - chr2L 19357602 intron dnt - chr2L 19357678 intron dnt - chr2L_16_19355001 chr2L_19355001 RAL-492 598 chr2L 19372702 19372738 chr2L 19372802 19372840 9 100 2.5 5.0 3.8 1.9 138 chr2L 19372702 3` UTR CG17349 + chr2L 19372771 intergenic CG17349 + chr2L 19372840 intergenic CG17349 + chr2L_9_19370001 chr2L_19370001 RAL-492 599 chr2L 19380490 19380524 chr2L 19380590 19380624 19 97 3.0 5.5 4.2 3.7 134 chr2L 19380490 intergenic CG17350 + chr2L 19380557 intergenic CG17350 + chr2L 19380624 intergenic CG17350 + chr2L_19_19380001 chr2L_19380001 RAL-492 600 chr2L 19405612 19405622 chr2L 19405721 19405732 4 110 3.0 1.0 2.0 1.3 120 chr2L 19405612 intron Pax - chr2L 19405672 intron Pax - chr2L 19405732 intron Pax - chr2L_4_19405001 chr2L_19405001 RAL-492 601 chr2L 19441055 19441075 chr2L 19441142 19441172 10 96 6.0 9.0 7.5 1.2 117 chr2L 19441055 intron CG10237 - chr2L 19441114 intron CG10237 - chr2L 19441172 5` UTR CG10237 - chr2L_10_19440001 chr2L_19440001 RAL-492 602 chr2L 19520163 19520193 chr2L 19520262 19520292 8 99 2.0 3.0 2.5 2.3 129 chr2L 19520163 intron CG10132 + chr2L 19520228 intron CG10132 + chr2L 19520292 intron CG10132 + chr2L_8_19520001 chr2L_19520001 RAL-492 603 chr2L 19543106 19543154 chr2L 19543210 19543258 22 101 4.5 1.5 3.0 5.5 152 chr2L 19543106 intron ref(2)P + chr2L 19543182 intron ref(2)P + chr2L 19543258 intron ref(2)P + chr2L_22_19540001 chr2L_19540001 RAL-492 604 chr2L 19559163 19559214 chr2L 19559271 19559320 22 103 5.5 4.0 4.8 3.8 157 chr2L 19559163 exon Tep5 + chr2L 19559242 exon Tep5 + chr2L 19559320 exon Tep5 + chr2L_22_19555001 chr2L_19555001 RAL-492 605 chr2L 19559990 19560034 chr2L 19560262 19560306 13 272 4.5 4.0 4.2 2.5 316 chr2L 19559990 exon Tep5 + chr2L 19560148 exon Tep5 + chr2L 19560306 intron Tep5 + chr2L_13_19560001 chr2L_19560001 RAL-492 606 chr2L 19562509 19562559 chr2L 19562609 19562659 22 94 5.5 5.5 5.5 3.4 150 chr2L 19562509 exon Tep5 + chr2L 19562584 intron Tep5 + chr2L 19562659 exon Tep5 + chr2L_22_19560001 chr2L_19560001 RAL-492 607 chr2L 19620080 19620100 chr2L 19621086 19621108 jockey 4 1004 13.0 3.5 8.2 0.4 1028 chr2L 19620080 intron Lar + chr2L 19620594 intron Lar + chr2L 19621108 intron Lar + chr2L_4_19620001 chr2L_19620001 RAL-492 608 chr2L 19620105 19620132 chr2L 19621081 19621132 jockey 6 995 4.5 3.5 4.0 1.2 1027 chr2L 19620105 intron Lar + chr2L 19620618 intron Lar + chr2L 19621132 intron Lar + chr2L_6_19620001 chr2L_19620001 RAL-492 609 chr2L 19638514 19638570 chr2L 19638622 19638678 24 107 5.5 5.0 5.2 3.9 164 chr2L 19638514 intron Lar + chr2L 19638596 intron Lar + chr2L 19638678 intron Lar + chr2L_24_19635001 chr2L_19635001 RAL-492 610 chr2L 19652549 19652603 chr2L 19674005 19674056 opus 12 21454 3.0 2.0 2.5 3.4 21507 chr2L 19652549 intron Lar + chr2L 19663302 intron Lar + chr2L 19674056 intron Lar + chr2L_12_19660001 chr2L_19660001 RAL-492 611 chr2L 19687537 19687563 chr2L 19687634 19687658 5 91 7.0 10.0 8.5 0.5 121 chr2L 19687537 intron Lar + chr2L 19687598 intron Lar + chr2L 19687658 intron Lar + chr2L_5_19685001 chr2L_19685001 RAL-492 612 chr2L 19703530 19703558 chr2L 19712686 19712714 roo 9 9154 8.5 7.0 7.8 1.0 9184 chr2L 19703530 intron Lar + chr2L 19708122 intron Lar + chr2L 19712714 intron Lar + chr2L_9_19705001 chr2L_19705001 RAL-492 613 chr2L 19737364 19737389 chr2L 19740820 19740839 1360 10 3461 5.0 2.0 3.5 2.2 3475 chr2L 19737364 intergenic Nf-YB + chr2L 19739102 intergenic not near genes chr2L 19740839 intergenic not near genes chr2L_10_19735001 chr2L_19735001 RAL-492 614 chr2L 19762798 19762827 chr2L 19763059 19763087 pogo 7 261 5.0 2.5 3.8 1.5 289 chr2L 19762798 5` UTR fbp - chr2L 19762942 intron fbp - chr2L 19763087 intron fbp - chr2L_7_19760001 chr2L_19760001 RAL-492 615 chr2L 19817513 19817564 chr2L 19817650 19817701 14 133 4.5 7.5 6.0 2.0 188 chr2L 19817513 intron sick + chr2L 19817607 intron sick + chr2L 19817701 intron sick + chr2L_14_19815001 chr2L_19815001 RAL-492 616 chr2L 19823244 19823287 chr2L 19823345 19823396 5 107 3.5 0.0 1.8 1.8 152 chr2L 19823244 intron sick + chr2L 19823320 intron sick + chr2L 19823396 intron sick + chr2L_5_19820001 chr2L_19820001 RAL-492 617 chr2L 19846265 19846270 chr2L 19846366 19846371 4 101 0.0 4.5 2.2 1.2 106 chr2L 19846265 intron sick + chr2L 19846318 intron sick + chr2L 19846371 intron sick + chr2L_4_19845001 chr2L_19845001 RAL-492 618 chr2L 19846273 19846277 chr2L 19846364 19846378 4 96 0.0 4.0 2.0 1.3 105 chr2L 19846273 intron sick + chr2L 19846326 intron sick + chr2L 19846378 intron sick + chr2L_4_19845001 chr2L_19845001 RAL-492 619 chr2L 19935233 19935245 chr2L 19935326 19935328 4 92 5.0 6.0 5.5 0.6 95 chr2L 19935233 intron sick + chr2L 19935280 intron sick + chr2L 19935328 intron sick + chr2L_4_19935001 chr2L_19935001 RAL-492 620 chr2L 19941496 19941516 chr2L 19941604 19941625 4 109 5.0 3.5 4.2 0.8 129 chr2L 19941496 intron sick + chr2L 19941560 intron sick + chr2L 19941625 intron sick + chr2L_4_19940001 chr2L_19940001 RAL-492 621 chr2L 20000039 20000067 chr2L 20000140 20000143 8 98 3.5 2.5 3.0 2.0 104 chr2L 20000039 intron CG43861 - chr2L 20000091 intron CG43861 - chr2L 20000143 intron,3` UTR CG43861 -,CR44908 - chr2L_8_20000001 chr2L_20000001 RAL-492 622 chr2L 20005870 20005905 chr2L 20010959 20011001 flea 12 5093 1.5 3.5 2.5 3.4 5131 chr2L 20005870 intron CG43861 - chr2L 20008436 intron CG43861 - chr2L 20011001 intron CG43861 - chr2L_12_20005001 chr2L_20005001 RAL-492 623 chr2L 20034603 20034640 chr2L 20034708 20034746 5 105 0.0 2.0 1.0 2.5 143 chr2L 20034603 intron sNPF + chr2L 20034674 intron sNPF + chr2L 20034746 intron sNPF + chr2L_5_20030001 chr2L_20030001 RAL-492 624 chr2L 20041160 20041208 chr2L 20041325 20041371 10 164 0.0 3.5 1.8 3.6 211 chr2L 20041160 intron sNPF + chr2L 20041266 intron sNPF + chr2L 20041371 intron sNPF + chr2L_10_20040001 chr2L_20040001 RAL-492 625 chr2L 20045192 20045202 chr2L 20045294 20045295 4 99 0.0 0.0 0.0 4.0 103 chr2L 20045192 intron sNPF + chr2L 20045244 intron sNPF + chr2L 20045295 intron sNPF + chr2L_4_20045001 chr2L_20045001 RAL-492 626 chr2L 20236495 20236537 chr2L 20236591 20236633 13 96 2.0 3.5 2.8 3.4 138 chr2L 20236495 intergenic not near genes chr2L 20236564 intergenic not near genes chr2L 20236633 intergenic not near genes chr2L_13_20235001 chr2L_20235001 RAL-492 627 chr2L 20272096 20272127 chr2L 20282827 20282858 copia 7 10731 6.5 6.5 6.5 0.9 10762 chr2L 20272096 intergenic not near genes chr2L 20277477 intergenic not near genes chr2L 20282858 intergenic not near genes chr2L_7_20275001 chr2L_20275001 RAL-492 628 chr2L 20272135 20272142 chr2L 20282821 20282873 copia 4 10720 5.5 5.5 5.5 0.6 10738 chr2L 20272135 intergenic not near genes chr2L 20277504 intergenic not near genes chr2L 20282873 intergenic not near genes chr2L_4_20275001 chr2L_20275001 RAL-492 629 chr2L 20296490 20296539 chr2L 20296591 20296634 12 99 0.0 0.0 0.0 12.0 144 chr2L 20296490 intergenic CR43414 - chr2L 20296562 intergenic CR43414 - chr2L 20296634 intergenic CR43414 - chr2L_12_20295001 chr2L_20295001 RAL-492 630 chr2L 20299400 20299438 chr2L 20299543 20299546 11 132 0.0 8.0 4.0 2.2 146 chr2L 20299400 intergenic not near genes chr2L 20299473 intergenic not near genes chr2L 20299546 intergenic not near genes chr2L_11_20295001 chr2L_20295001 RAL-492 631 chr2L 20303159 20303182 chr2L 20310647 20310669 blood 4 7486 2.5 5.5 4.0 0.8 7510 chr2L 20303159 intergenic not near genes chr2L 20306914 intergenic not near genes chr2L 20310669 intergenic not near genes chr2L_4_20305001 chr2L_20305001 RAL-492 632 chr2L 20326556 20326605 chr2L 20326656 20326669 15 92 3.0 4.0 3.5 3.3 113 chr2L 20326556 intron spir + chr2L 20326612 intron spir + chr2L 20326669 intron spir + chr2L_15_20325001 chr2L_20325001 RAL-492 633 chr2L 20327231 20327248 chr2L 20327329 20327346 5 98 0.0 3.5 1.8 1.8 115 chr2L 20327231 intron spir + chr2L 20327288 intron spir + chr2L 20327346 intron spir + chr2L_5_20325001 chr2L_20325001 RAL-492 634 chr2L 20372198 20372217 chr2L 20372468 20372487 pogo 6 270 1.5 4.5 3.0 1.5 289 chr2L 20372198 intergenic Ugt37a1 - chr2L 20372342 intergenic Ugt37a1 - chr2L 20372487 exon Ugt37a1 - chr2L_6_20370001 chr2L_20370001 RAL-492 635 chr2L 20393769 20393815 chr2L 20393955 20394001 14 184 4.5 6.0 5.2 2.3 232 chr2L 20393769 intron CG10947 - chr2L 20393885 intron CG10947 - chr2L 20394001 intron CG10947 - chr2L_14_20390001 chr2L_20390001 RAL-492 636 chr2L 20498669 20498706 chr2L 20498787 20498825 12 118 5.5 4.5 5.0 2.0 156 chr2L 20498669 intergenic not near genes chr2L 20498747 intergenic not near genes chr2L 20498825 intergenic not near genes chr2L_12_20495001 chr2L_20495001 RAL-492 637 chr2L 20546031 20546069 chr2L 20546128 20546166 10 97 4.0 7.0 5.5 1.5 135 chr2L 20546031 intergenic not near genes chr2L 20546098 intergenic not near genes chr2L 20546166 intergenic not near genes chr2L_10_20545001 chr2L_20545001 RAL-492 638 chr2L 20549119 20549148 chr2L 20549219 20549250 8 101 5.0 6.0 5.5 1.2 131 chr2L 20549119 intergenic not near genes chr2L 20549184 intergenic not near genes chr2L 20549250 intergenic not near genes chr2L_8_20545001 chr2L_20545001 RAL-492 639 chr2L 20549150 20549155 chr2L 20549218 20549257 6 96 4.0 6.0 5.0 1.0 107 chr2L 20549150 intergenic not near genes chr2L 20549204 intergenic not near genes chr2L 20549257 intergenic not near genes chr2L_6_20545001 chr2L_20545001 RAL-492 640 chr2L 20553165 20553217 chr2L 20553261 20553309 13 95 4.5 2.0 3.2 3.1 144 chr2L 20553165 intergenic not near genes chr2L 20553237 intergenic not near genes chr2L 20553309 intergenic not near genes chr2L_13_20550001 chr2L_20550001 RAL-492 641 chr2L 20567319 20567368 chr2L 20567471 20567509 13 151 5.0 8.5 6.8 1.7 190 chr2L 20567319 intron CR45347 + chr2L 20567414 intron CR45347 + chr2L 20567509 intron CR45347 + chr2L_13_20565001 chr2L_20565001 RAL-492 642 chr2L 20568641 20568682 chr2L 20569051 20569091 X-element 4 402 3.5 4.0 3.8 0.8 450 chr2L 20568641 intron CR45347 + chr2L 20568866 intron CR45347 + chr2L 20569091 intron CR45347 + chr2L_4_20565001 chr2L_20565001 RAL-492 643 chr2L 20576201 20576250 chr2L 20583685 20583735 blood 19 7480 5.0 2.5 3.8 4.0 7534 chr2L 20576201 intergenic CR45347 + chr2L 20579968 intergenic not near genes chr2L 20583735 3` UTR CR44909 - chr2L_19_20575001 chr2L_20575001 RAL-492 644 chr2L 20607646 20607664 chr2L 20607719 20607743 4 74 2.0 4.5 3.2 1.0 97 chr2L 20607646 intron,3` UTR CR44909 -,CR43608 - chr2L 20607694 intron,3` UTR CR44909 -,CR43608 - chr2L 20607743 intron,3` UTR CR44909 -,CR43608 - chr2L_4_20605001 chr2L_20605001 RAL-492 645 chr2L 20625636 20625685 chr2L 20625899 20625948 11 260 0.5 3.0 1.8 3.9 312 chr2L 20625636 intron CR44909 - chr2L 20625792 3` UTR CR44909 - chr2L 20625948 3` UTR CR44909 - chr2L_11_20625001 chr2L_20625001 RAL-492 646 chr2L 20817817 20817867 chr2L 20817914 20817960 14 90 4.5 2.5 3.5 3.1 143 chr2L 20817817 exon CheB38a - chr2L 20817888 exon CheB38a - chr2L 20817960 exon CheB38a - chr2L_14_20815001 chr2L_20815001 RAL-492 647 chr2L 20821481 20821515 chr2L 20821647 20821676 21 166 6.5 2.5 4.5 3.8 195 chr2L 20821481 intergenic not near genes chr2L 20821578 intergenic not near genes chr2L 20821676 intergenic not near genes chr2L_21_20820001 chr2L_20820001 RAL-492 648 chr2L 20835790 20835838 chr2L 20836527 20836575 Quasimodo 10 736 1.5 3.5 2.5 2.9 785 chr2L 20835790 5` UTR Oseg5 - chr2L 20836182 intergenic Oseg5 -,Spn38F - chr2L 20836575 intergenic Spn38F - chr2L_10_20835001 chr2L_20835001 RAL-492 649 chr2L 20840007 20840014 chr2L 20840239 20840245 5 231 17.0 3.0 10.0 0.5 238 chr2L 20840007 intergenic not near genes chr2L 20840126 intergenic not near genes chr2L 20840245 intergenic not near genes chr2L_5_20840001 chr2L_20840001 RAL-492 650 chr2L 20840024 20840057 chr2L 20840237 20840289 15 226 4.0 3.0 3.5 3.3 265 chr2L 20840024 intergenic not near genes chr2L 20840156 intergenic not near genes chr2L 20840289 intergenic CG31676 + chr2L_15_20840001 chr2L_20840001 RAL-492 651 chr2L 20891516 20891536 chr2L 20896637 20896646 jockey 7 5118 1.5 3.0 2.2 2.2 5130 chr2L 20891516 intron,intron CG43739 -,sky - chr2L 20894081 intron,intron CG43739 -,sky - chr2L 20896646 intron,intron CG43739 -,sky - chr2L_7_20890001 chr2L_20890001 RAL-492 652 chr2L 20901473 20901485 chr2L 20902657 20902668 1360 4 1182 0.5 6.5 3.5 0.9 1195 chr2L 20901473 intron,intron CG43739 -,sky - chr2L 20902070 intron,intron CG43739 -,sky - chr2L 20902668 intron,intron CG43739 -,sky - chr2L_4_20900001 chr2L_20900001 RAL-492 653 chr2L 20976632 20976660 chr2L 20981463 20981491 X-element 9 4834 5.5 3.0 4.2 1.7 4859 chr2L 20976632 intron CG42238 - chr2L 20979062 intron CG42238 - chr2L 20981491 intron CG42238 - chr2L_9_20975001 chr2L_20975001 RAL-492 654 chr2L 21020264 21020306 chr2L 21023961 21023987 NOF 9 3689 3.5 4.5 4.0 1.8 3723 chr2L 21020264 intron CG42238 - chr2L 21022126 intron CG42238 - chr2L 21023987 intron CG42238 - chr2L_9_21020001 chr2L_21020001 RAL-492 655 chr2L 21041119 21041165 chr2L 21049400 21049446 Tirant 21 8277 4.5 3.5 4.0 4.2 8327 chr2L 21041119 intron CG42238 - chr2L 21045282 intron CG42238 - chr2L 21049446 intron CG42238 - chr2L_21_21045001 chr2L_21045001 RAL-492 656 chr2L 21074906 21074952 chr2L 21075017 21075063 5 111 2.5 2.5 2.5 1.4 157 chr2L 21074906 intergenic tadr + chr2L 21074984 intergenic tadr + chr2L 21075063 intergenic tadr + chr2L_5_21070001 chr2L_21070001 RAL-492 657 chr2L 21113675 21113696 chr2L 21113788 21113809 9 112 8.0 7.0 7.5 1.1 134 chr2L 21113675 intron Nhe2 + chr2L 21113742 intron Nhe2 + chr2L 21113809 intron Nhe2 + chr2L_9_21110001 chr2L_21110001 RAL-492 658 chr2L 21113704 21113717 chr2L 21113784 21113830 9 106 6.0 6.0 6.0 1.3 126 chr2L 21113704 intron Nhe2 + chr2L 21113767 intron Nhe2 + chr2L 21113830 intron Nhe2 + chr2L_9_21110001 chr2L_21110001 RAL-492 659 chr2L 21152862 21152893 chr2L 21152964 21153008 19 112 3.5 6.0 4.8 3.3 146 chr2L 21152862 intergenic not near genes chr2L 21152935 intergenic not near genes chr2L 21153008 intergenic not near genes chr2L_19_21150001 chr2L_21150001 RAL-492 660 chr2L 21286586 21286620 chr2L 21286684 21286718 12 98 4.5 3.5 4.0 2.4 132 chr2L 21286586 exon Mio - chr2L 21286652 intron Mio - chr2L 21286718 intron Mio - chr2L_12_21285001 chr2L_21285001 RAL-492 661 chr2L 21307450 21307498 chr2L 21307551 21307600 5 96 3.0 3.0 3.0 1.2 150 chr2L 21307450 intron Mio - chr2L 21307525 intron Mio - chr2L 21307600 intron Mio - chr2L_5_21305001 chr2L_21305001 RAL-492 662 chr2L 21347542 21347572 chr2L 21355025 21355064 blood 6 7490 3.0 2.0 2.5 1.7 7522 chr2L 21347542 intron Tsp39D + chr2L 21351303 intron Tsp39D + chr2L 21355064 intron Tsp39D + chr2L_6_21350001 chr2L_21350001 RAL-492 663 chr2L 21597030 21597062 chr2L 21604785 21604795 roo 11 7760 0.5 3.5 2.0 3.7 7765 chr2L 21597030 intergenic not near genes chr2L 21600912 intergenic not near genes chr2L 21604795 intergenic not near genes chr2L_11_21600001 chr2L_21600001 RAL-492 664 chr2L 21653174 21653219 chr2L 21656498 21656543 invader4 9 3323 2.0 3.0 2.5 2.6 3369 chr2L 21653174 intergenic not near genes chr2L 21654858 intergenic not near genes chr2L 21656543 intergenic not near genes chr2L_9_21650001 chr2L_21650001 RAL-492 665 chr2L 21691809 21691834 chr2L 21698296 21698324 Burdock 5 6489 5.0 0.5 2.8 1.3 6515 chr2L 21691809 intron CG31619 + chr2L 21695066 intron CG31619 + chr2L 21698324 intron CG31619 + chr2L_5_21695001 chr2L_21695001 RAL-492 666 chr2L 21754641 21754678 chr2L 21754742 21754779 5 101 2.5 3.0 2.8 1.3 138 chr2L 21754641 intron step - chr2L 21754710 intron step - chr2L 21754779 intron step - chr2L_5_21750001 chr2L_21750001 RAL-492 667 chr2L 21755473 21755521 chr2L 21755617 21755665 18 140 4.5 4.5 4.5 3.3 192 chr2L 21755473 intron step - chr2L 21755569 intron step - chr2L 21755665 intron step - chr2L_18_21755001 chr2L_21755001 RAL-492 668 chr2L 21757561 21757595 chr2L 21757662 21757696 6 101 1.5 4.0 2.8 1.6 135 chr2L 21757561 intergenic step -,CG1416 + chr2L 21757628 intergenic step -,CG1416 + chr2L 21757696 intergenic step -,CG1416 + chr2L_6_21755001 chr2L_21755001 RAL-492 669 chr2L 21836393 21836425 chr2L 21836482 21836535 10 104 2.0 4.0 3.0 2.5 142 chr2L 21836393 3` UTR tsh + chr2L 21836464 3` UTR tsh + chr2L 21836535 3` UTR tsh + chr2L_10_21835001 chr2L_21835001 RAL-492 670 chr2L 21855460 21855501 chr2L 21855566 21855608 6 106 3.0 2.5 2.8 1.6 148 chr2L 21855460 intron CR44917 + chr2L 21855534 intron CR44917 + chr2L 21855608 intron CR44917 + chr2L_6_21855001 chr2L_21855001 RAL-492 671 chr2L 21859298 21859351 chr2L 21859398 21859409 23 93 2.5 2.5 2.5 6.6 111 chr2L 21859298 intron CR44917 + chr2L 21859354 intron CR44917 + chr2L 21859409 intron CR44917 + chr2L_23_21855001 chr2L_21855001 RAL-492 672 chr2L 21934548 21934589 chr2L 21934691 21934712 8 130 7.5 1.0 4.2 1.5 164 chr2L 21934548 intergenic not near genes chr2L 21934630 intergenic not near genes chr2L 21934712 intergenic not near genes chr2L_8_21930001 chr2L_21930001 RAL-492 673 chr2L 21953802 21953814 chr2L 21954686 21954695 4 882 26.0 40.0 33.0 0.1 893 chr2L 21953802 intergenic not near genes chr2L 21954248 intergenic not near genes chr2L 21954695 intergenic not near genes chr2L_4_21950001 chr2L_21950001 RAL-492 674 chr2L 21953795 21953840 chr2L 21954698 21954721 13 889 28.0 36.5 32.2 0.4 926 chr2L 21953795 intergenic not near genes chr2L 21954258 intergenic not near genes chr2L 21954721 intergenic not near genes chr2L_13_21950001 chr2L_21950001 RAL-492 675 chr2L 21981673 21981681 chr2L 21990855 21990866 roo 5 9184 11.0 11.0 11.0 0.4 9193 chr2L 21981673 exon CG2528 - chr2L 21986270 intron CG2528 - chr2L 21990866 exon CG2528 - chr2L_5_21985001 chr2L_21985001 RAL-492 676 chr2L 21981683 21981715 chr2L 21990853 21990888 roo 12 9178 4.0 9.5 6.8 1.5 9205 chr2L 21981683 exon CG2528 - chr2L 21986286 intron CG2528 - chr2L 21990888 exon CG2528 - chr2L_12_21985001 chr2L_21985001 RAL-492 677 chr2L 21994604 21994649 chr2L 21994699 21994745 16 95 2.0 3.0 2.5 4.6 141 chr2L 21994604 intergenic not near genes chr2L 21994674 intergenic not near genes chr2L 21994745 intergenic not near genes chr2L_16_21990001 chr2L_21990001 RAL-492 678 chr2L 22148558 22148591 chr2L 22148655 22148688 6 96 4.0 0.5 2.2 1.9 130 chr2L 22148558 intron CG42748 + chr2L 22148623 intron CG42748 + chr2L 22148688 intron CG42748 + chr2L_6_22145001 chr2L_22145001 RAL-492 679 chr2L 22165721 22165747 chr2L 22165823 22165845 4 101 1.5 2.5 2.0 1.3 124 chr2L 22165721 3` UTR,3` UTR CG42748 +,Clamp - chr2L 22165783 3` UTR,3` UTR CG42748 +,Clamp - chr2L 22165845 3` UTR,3` UTR CG42748 +,Clamp - chr2L_4_22165001 chr2L_22165001 RAL-492 680 chr2L 22178058 22178067 chr2L 22178127 22178172 4 96 3.5 4.0 3.8 0.8 114 chr2L 22178058 intron CG3635 + chr2L 22178115 intron CG3635 + chr2L 22178172 intron CG3635 + chr2L_4_22175001 chr2L_22175001 RAL-492 681 chr2L 22192011 22192055 chr2L 22192120 22192164 12 102 6.0 5.5 5.8 1.8 153 chr2L 22192011 intron Ir40a - chr2L 22192088 intron Ir40a - chr2L 22192164 intron Ir40a - chr2L_12_22190001 chr2L_22190001 RAL-492 682 chr2L 22199008 22199049 chr2L 22199115 22199159 14 108 2.5 6.0 4.2 2.7 151 chr2L 22199008 intron Ir40a - chr2L 22199084 intron Ir40a - chr2L 22199159 intron Ir40a - chr2L_14_22195001 chr2L_22195001 RAL-492 683 chr2L 22212116 22212162 chr2L 22212683 22212729 8 567 0.5 3.0 1.8 2.9 613 chr2L 22212116 intron Ir40a - chr2L 22212422 intron Ir40a - chr2L 22212729 exon Ir40a - chr2L_8_22210001 chr2L_22210001 RAL-492 684 chr2L 22214514 22214545 chr2L 22214624 22214654 8 110 3.0 4.0 3.5 1.8 140 chr2L 22214514 intergenic Ir40a - chr2L 22214584 intergenic Ir40a - chr2L 22214654 intergenic Ir40a - chr2L_8_22210001 chr2L_22210001 RAL-492 685 chr2L 22258594 22258634 chr2L 22260739 22260778 G6 6 2144 1.5 1.0 1.2 2.7 2184 chr2L 22258594 intergenic Tif-IA + chr2L 22259686 intergenic not near genes chr2L 22260778 intergenic not near genes chr2L_6_22255001 chr2L_22255001 RAL-492 686 chr2L 22545965 22546002 chr2L 22546074 22546107 19 108 7.5 1.5 4.5 3.5 142 chr2L 22545965 intron CG17490 + chr2L 22546036 intron CG17490 + chr2L 22546107 intron CG17490 + chr2L_19_22545001 chr2L_22545001 RAL-492 687 chr2L 22548921 22548931 chr2L 22550166 22550175 1360 5 1245 0.0 5.0 2.5 1.4 1254 chr2L 22548921 intergenic CG17490 + chr2L 22549548 intergenic not near genes chr2L 22550175 intergenic CG17493 + chr2L_5_22545001 chr2L_22545001 RAL-492 688 chr2L 22548932 22548944 chr2L 22550135 22550178 1360 7 1237 0.0 1.0 0.5 4.7 1246 chr2L 22548932 intergenic CG17490 + chr2L 22549555 intergenic not near genes chr2L 22550178 intergenic CG17493 + chr2L_7_22545001 chr2L_22545001 RAL-492 689 chr2L 22581956 22581983 chr2L 22583765 22583792 S-element 5 1809 4.0 2.0 3.0 1.2 1836 chr2L 22581956 intron CG17494 + chr2L 22582874 intron CG17494 + chr2L 22583792 intron CG17494 + chr2L_5_22580001 chr2L_22580001 RAL-492 690 chr2L 22676126 22676152 chr2L 22676369 22676410 6 255 2.5 5.5 4.0 1.2 284 chr2L 22676126 intron CG40006 - chr2L 22676268 intron CG40006 - chr2L 22676410 intron CG40006 - chr2L_6_22675001 chr2L_22675001 RAL-492 691 chr2L 22679800 22679804 chr2L 22684574 22684577 F-element 4 4780 4.0 9.5 6.8 0.5 4777 chr2L 22679800 intron CG40006 - chr2L 22682188 intron CG40006 - chr2L 22684577 intron CG40006 - chr2L_4_22680001 chr2L_22680001 RAL-492 692 chr2L 22693910 22693949 chr2L 22694005 22694053 22 102 0.0 4.5 2.2 6.9 143 chr2L 22693910 intron CG40006 - chr2L 22693982 intron CG40006 - chr2L 22694053 intron CG40006 - chr2L_22_22690001 chr2L_22690001 RAL-492 693 chr2L 22776405 22776450 chr2L 22778214 22778259 S-element 5 1809 1.0 1.0 1.0 2.5 1854 chr2L 22776405 intergenic not near genes chr2L 22777332 intergenic not near genes chr2L 22778259 intergenic not near genes chr2L_5_22775001 chr2L_22775001 RAL-492 694 chr2L 23168854 23168881 chr2L 23168932 23168977 11 85 4.5 3.5 4.0 2.2 123 chr2L 23168854 intron,5` UTR CG12567 -,mir-2490 + chr2L 23168916 intron CG12567 - chr2L 23168977 intron CG12567 - chr2L_11_23165001 chr2L_23165001 RAL-492 695 chr2R 529322 529350 chr2R 537967 537995 Max-element 6 8644 3.0 8.5 5.8 0.9 8673 chr2R 529322 intron CG40378 + chr2R 533658 intron CG40378 + chr2R 537995 intron CG40378 + chr2R_6_530001 chr2R_530001 RAL-492 696 chr2R 552740 552788 chr2R 553978 553986 1360 5 1213 2.0 2.0 2.0 1.7 1246 chr2R 552740 intron CG40378 + chr2R 553363 intron CG40378 + chr2R 553986 intron CG40378 + chr2R_5_550001 chr2R_550001 RAL-492 697 chr2R 1072743 1072784 chr2R 1075068 1075109 Cr1a 9 2325 28.0 11.0 19.5 0.4 2366 chr2R 1072743 intron rl + chr2R 1073926 intron rl + chr2R 1075109 intron rl + chr2R_9_1070001 chr2R_1070001 RAL-492 698 chr2R 1082372 1082373 chr2R 1087130 1087167 Doc 4 4780 6.5 5.5 6.0 0.6 4795 chr2R 1082372 intron rl + chr2R 1084770 intron rl + chr2R 1087167 intron rl + chr2R_4_1080001 chr2R_1080001 RAL-492 699 chr2R 1082374 1082382 chr2R 1087127 1087162 Doc 8 4764 4.5 5.5 5.0 1.3 4788 chr2R 1082374 intron rl + chr2R 1084768 intron rl + chr2R 1087162 intron rl + chr2R_8_1080001 chr2R_1080001 RAL-492 700 chr2R 1516591 1516603 chr2R 1521339 1521351 1731 5 4748 16.5 6.5 11.5 0.4 4760 chr2R 1516591 exon Maf1 - chr2R 1518971 intron Maf1 - chr2R 1521351 5` UTR Maf1 - chr2R_5_1515001 chr2R_1515001 RAL-492 701 chr2R 2015124 2015158 chr2R 2015214 2015255 6 95 2.5 2.5 2.5 1.7 131 chr2R 2015124 intron CG17684 - chr2R 2015190 intron CG17684 - chr2R 2015255 intron CG17684 - chr2R_6_2015001 chr2R_2015001 RAL-492 702 chr2R 2498967 2499014 chr2R 2508132 2508181 roo 9 9165 5.0 1.5 3.2 2.1 9214 chr2R 2498967 intron MFS17 - chr2R 2503574 intron MFS17 - chr2R 2508181 intron MFS17 - chr2R_9_2500001 chr2R_2500001 RAL-492 703 chr2R 2508288 2508340 chr2R 2508446 2508492 12 156 3.0 4.5 3.8 2.5 204 chr2R 2508288 intron MFS17 - chr2R 2508390 intron MFS17 - chr2R 2508492 intron MFS17 - chr2R_12_2505001 chr2R_2505001 RAL-492 704 chr2R 1373049 1373064 chr2R 2589328 2589346 Cr1a 4 1216280 13.0 6.0 9.5 0.4 1216297 chr2R 1373049 intron l(2)41Ab + chr2R 1981198 intron CG17684 - chr2R 2589346 intergenic not near genes chr2R_4_1980001 chr2R_1980001 RAL-492 705 chr2R 3130225 3130246 chr2R 3130315 3130328 9 101 5.0 4.5 4.8 1.6 103 chr2R 3130225 intron CG42596 + chr2R 3130276 intron CG42596 + chr2R 3130328 intron CG42596 + chr2R_9_3130001 chr2R_3130001 RAL-492 706 chr2R 3144069 3144097 chr2R 3393363 3393395 Doc 5 249297 23.5 27.0 25.2 0.2 249326 chr2R 3144069 intron CG42596 + chr2R 3268732 intergenic not near genes chr2R 3393395 intergenic not near genes chr2R_5_3265001 chr2R_3265001 RAL-492 707 chr2R 3291694 3291929 chr2R 3914843 3915118 6 623177 19.0 26.0 22.5 0.3 623424 chr2R 3291694 intergenic not near genes chr2R 3603406 intergenic not near genes chr2R 3915118 intron uex - chr2R_6_3600001 chr2R_3600001 RAL-492 708 chr2R 3293728 3293765 chr2R 3293826 3293849 8 91 2.0 2.0 2.0 2.7 121 chr2R 3293728 intergenic not near genes chr2R 3293788 intergenic not near genes chr2R 3293849 intergenic not near genes chr2R_8_3290001 chr2R_3290001 RAL-492 709 chr2R 3526633 3526638 chr2R 3531383 3531388 F-element 4 4750 1.5 2.0 1.8 1.4 4755 chr2R 3526633 intergenic not near genes chr2R 3529010 intergenic not near genes chr2R 3531388 intergenic not near genes chr2R_4_3525001 chr2R_3525001 RAL-492 710 chr2R 3583041 3583088 chr2R 3583136 3583170 7 91 1.5 0.5 1.0 3.5 129 chr2R 3583041 intergenic not near genes chr2R 3583106 intergenic not near genes chr2R 3583170 intergenic not near genes chr2R_7_3580001 chr2R_3580001 RAL-492 711 chr2R 4015296 4015347 chr2R 4015489 4015540 9 193 1.0 2.5 1.8 3.2 244 chr2R 4015296 intron Haspin + chr2R 4015418 intron Haspin + chr2R 4015540 intron Haspin + chr2R_9_4015001 chr2R_4015001 RAL-492 712 chr2R 4387296 4387309 chr2R 4387467 4387480 4 171 3.5 0.0 1.8 1.4 184 chr2R 4387296 intron Gprk1 - chr2R 4387388 intron Gprk1 - chr2R 4387480 intron Gprk1 - chr2R_4_4385001 chr2R_4385001 RAL-492 713 chr2R 4621296 4621341 chr2R 4621856 4621900 18 557 0.5 2.5 1.5 7.2 604 chr2R 4621296 3` UTR CR44101 - chr2R 4621598 3` UTR CR44101 - chr2R 4621900 3` UTR CR44101 - chr2R_18_4620001 chr2R_4620001 RAL-492 714 chr2R 4622932 4622987 chr2R 4624111 4624158 1360 11 1172 3.0 6.0 4.5 2.0 1226 chr2R 4622932 intergenic CR44101 - chr2R 4623545 intergenic not near genes chr2R 4624158 intergenic not near genes chr2R_11_4620001 chr2R_4620001 RAL-492 715 chr2R 5062758 5062804 chr2R 5062865 5062867 17 107 5.5 6.0 5.8 2.5 109 chr2R 5062758 intergenic not near genes chr2R 5062812 intergenic not near genes chr2R 5062867 intergenic not near genes chr2R_17_5060001 chr2R_5060001 RAL-492 716 chr2R 5192700 5192727 chr2R 5192797 5192824 9 97 6.0 3.0 4.5 1.6 124 chr2R 5192700 intron Nipped-A - chr2R 5192762 intron Nipped-A - chr2R 5192824 intron Nipped-A - chr2R_9_5190001 chr2R_5190001 RAL-492 717 chr2R 5209762 5209813 chr2R 5210315 5210366 19 553 2.5 2.0 2.2 5.9 604 chr2R 5209762 intron Nipped-A - chr2R 5210064 intron Nipped-A - chr2R 5210366 intron Nipped-A - chr2R_19_5210001 chr2R_5210001 RAL-492 718 chr2R 5240204 5240235 chr2R 5240300 5240330 7 90 10.0 8.5 9.2 0.7 126 chr2R 5240204 intron Nipped-A - chr2R 5240267 intron Nipped-A - chr2R 5240330 intron Nipped-A - chr2R_7_5240001 chr2R_5240001 RAL-492 719 chr2R 5363473 5363519 chr2R 5363566 5363617 14 96 3.0 2.0 2.5 4.0 144 chr2R 5363473 5` UTR CR42646 + chr2R 5363545 intron CR42646 + chr2R 5363617 intron CR42646 + chr2R_14_5360001 chr2R_5360001 RAL-492 720 chr2R 5396245 5396282 chr2R 5396502 5396539 14 257 15.0 21.0 18.0 0.7 294 chr2R 5396245 intergenic not near genes chr2R 5396392 intergenic not near genes chr2R 5396539 intergenic not near genes chr2R_14_5395001 chr2R_5395001 RAL-492 721 chr2R 5417980 5418027 chr2R 5420632 5420679 Burdock 6 2649 2.0 3.0 2.5 1.7 2699 chr2R 5417980 intron laccase2 + chr2R 5419330 intron laccase2 + chr2R 5420679 intron laccase2 + chr2R_6_5415001 chr2R_5415001 RAL-492 722 chr2R 5472369 5472380 chr2R 5472483 5472493 8 111 10.0 8.0 9.0 0.8 124 chr2R 5472369 intron CG30440 - chr2R 5472431 intron CG30440 - chr2R 5472493 intron CG30440 - chr2R_8_5470001 chr2R_5470001 RAL-492 723 chr2R 5473347 5473367 chr2R 5473462 5473482 6 114 6.5 2.0 4.2 1.2 135 chr2R 5473347 intron CG30440 - chr2R 5473414 intron CG30440 - chr2R 5473482 intron CG30440 - chr2R_6_5470001 chr2R_5470001 RAL-492 724 chr2R 5473371 5473391 chr2R 5473461 5473506 7 111 3.5 2.0 2.8 1.8 135 chr2R 5473371 intron CG30440 - chr2R 5473438 intron CG30440 - chr2R 5473506 intron CG30440 - chr2R_7_5470001 chr2R_5470001 RAL-492 725 chr2R 5581404 5581415 chr2R 5627633 5627644 6 46229 13.5 8.0 10.8 0.5 46240 chr2R 5581404 intergenic not near genes chr2R 5604524 intron Fis1 - chr2R 5627644 intergenic not near genes chr2R_6_5600001 chr2R_5600001 RAL-492 726 chr2R 5621381 5621403 chr2R 5621452 5621453 6 76 3.0 2.5 2.8 1.6 72 chr2R 5621381 intergenic not near genes chr2R 5621417 intergenic not near genes chr2R 5621453 intergenic not near genes chr2R_6_5620001 chr2R_5620001 RAL-492 727 chr2R 5682637 5682677 chr2R 5682748 5682789 18 106 10.5 5.5 8.0 2.0 152 chr2R 5682637 intron scaf - chr2R 5682713 intron scaf - chr2R 5682789 intron scaf - chr2R_18_5680001 chr2R_5680001 RAL-492 728 chr2R 5701735 5701782 chr2R 5701835 5701882 14 96 1.5 2.5 2.0 4.7 147 chr2R 5701735 intergenic vlc + chr2R 5701808 intergenic vlc + chr2R 5701882 intergenic vlc + chr2R_14_5700001 chr2R_5700001 RAL-492 729 chr2R 5848958 5848994 chr2R 5849078 5849096 6 116 2.0 7.0 4.5 1.1 138 chr2R 5848958 intron dpr12 + chr2R 5849027 intron dpr12 + chr2R 5849096 intron dpr12 + chr2R_6_5845001 chr2R_5845001 RAL-492 730 chr2R 5852017 5852054 chr2R 5852135 5852178 8 121 1.0 1.5 1.2 3.6 161 chr2R 5852017 intron dpr12 + chr2R 5852098 intron dpr12 + chr2R 5852178 intron dpr12 + chr2R_8_5850001 chr2R_5850001 RAL-492 731 chr2R 5861267 5861320 chr2R 5861408 5861449 12 125 3.0 3.0 3.0 3.0 182 chr2R 5861267 intergenic dpr12 + chr2R 5861358 intergenic not near genes chr2R 5861449 intergenic not near genes chr2R_12_5860001 chr2R_5860001 RAL-492 732 chr2R 5869258 5869308 chr2R 5874354 5874372 flea 17 5089 8.0 3.5 5.8 2.5 5114 chr2R 5869258 intergenic not near genes chr2R 5871815 intergenic not near genes chr2R 5874372 intergenic not near genes chr2R_17_5870001 chr2R_5870001 RAL-492 733 chr2R 5876849 5876901 chr2R 5876971 5877000 12 114 5.0 3.0 4.0 2.4 151 chr2R 5876849 intergenic not near genes chr2R 5876924 intergenic not near genes chr2R 5877000 intergenic not near genes chr2R_12_5875001 chr2R_5875001 RAL-492 734 chr2R 5878909 5878934 chr2R 5879009 5879033 8 100 2.5 5.0 3.8 1.7 124 chr2R 5878909 intergenic CG44438 - chr2R 5878971 intergenic CG44438 - chr2R 5879033 intergenic CG44438 - chr2R_8_5875001 chr2R_5875001 RAL-492 735 chr2R 5885354 5885366 chr2R 5885503 5885515 4 149 3.5 3.5 3.5 0.9 161 chr2R 5885354 5` UTR CR44125 + chr2R 5885434 5` UTR CR44125 + chr2R 5885515 5` UTR CR44125 + chr2R_4_5885001 chr2R_5885001 RAL-492 736 chr2R 5947917 5947928 chr2R 5948087 5948099 8 171 14.0 0.0 7.0 1.0 182 chr2R 5947917 intergenic not near genes chr2R 5948008 intergenic not near genes chr2R 5948099 intergenic not near genes chr2R_8_5945001 chr2R_5945001 RAL-492 737 chr2R 5947929 5947957 chr2R 5948086 5948089 9 159 6.5 0.0 3.2 2.1 160 chr2R 5947929 intergenic not near genes chr2R 5948009 intergenic not near genes chr2R 5948089 intergenic not near genes chr2R_9_5945001 chr2R_5945001 RAL-492 738 chr2R 5978971 5979011 chr2R 5979207 5979247 14 236 4.5 3.0 3.8 2.9 276 chr2R 5978971 intron mle - chr2R 5979109 intron mle - chr2R 5979247 intron mle - chr2R_14_5975001 chr2R_5975001 RAL-492 739 chr2R 6037440 6037469 chr2R 6037544 6037574 7 105 2.5 4.0 3.2 1.7 134 chr2R 6037440 intron CG14591 - chr2R 6037507 intron CG14591 - chr2R 6037574 intron CG14591 - chr2R_7_6035001 chr2R_6035001 RAL-492 740 chr2R 6086440 6086482 chr2R 6087328 6087369 9 887 0.5 3.5 2.0 3.0 929 chr2R 6086440 intergenic not near genes chr2R 6086904 intergenic not near genes chr2R 6087369 intergenic not near genes chr2R_9_6085001 chr2R_6085001 RAL-492 741 chr2R 6129315 6129355 chr2R 6129405 6129428 14 94 4.5 6.0 5.2 2.3 113 chr2R 6129315 intron EcR - chr2R 6129372 intron EcR - chr2R 6129428 intron EcR - chr2R_14_6125001 chr2R_6125001 RAL-492 742 chr2R 6144389 6144439 chr2R 6144492 6144543 15 102 3.5 4.5 4.0 3.0 154 chr2R 6144389 intron EcR - chr2R 6144466 intron EcR - chr2R 6144543 intron EcR - chr2R_15_6140001 chr2R_6140001 RAL-492 743 chr2R 6168195 6168222 chr2R 6168285 6168324 12 100 2.5 3.5 3.0 3.0 129 chr2R 6168195 intron EcR - chr2R 6168260 intron EcR - chr2R 6168324 intron EcR - chr2R_12_6165001 chr2R_6165001 RAL-492 744 chr2R 6178106 6178141 chr2R 6178251 6178287 6 146 1.0 4.5 2.8 1.6 181 chr2R 6178106 intergenic not near genes chr2R 6178196 intergenic not near genes chr2R 6178287 intergenic not near genes chr2R_6_6175001 chr2R_6175001 RAL-492 745 chr2R 6194669 6194698 chr2R 6194772 6194794 8 102 7.0 9.5 8.2 0.9 125 chr2R 6194669 intron Ptr - chr2R 6194732 intron Ptr - chr2R 6194794 intron Ptr - chr2R_8_6190001 chr2R_6190001 RAL-492 746 chr2R 6494513 6494549 chr2R 6499295 6499330 F-element 5 4777 2.5 1.0 1.8 1.8 4817 chr2R 6494513 intergenic not near genes chr2R 6496922 intergenic not near genes chr2R 6499330 intergenic not near genes chr2R_5_6495001 chr2R_6495001 RAL-492 747 chr2R 6530750 6530798 chr2R 6530850 6530898 8 100 1.0 3.5 2.2 2.5 148 chr2R 6530750 intron jing + chr2R 6530824 intron jing + chr2R 6530898 intron jing + chr2R_8_6530001 chr2R_6530001 RAL-492 748 chr2R 6541055 6541103 chr2R 6541151 6541199 11 94 4.0 2.0 3.0 2.8 144 chr2R 6541055 intron jing + chr2R 6541127 intron jing + chr2R 6541199 intron jing + chr2R_11_6540001 chr2R_6540001 RAL-492 749 chr2R 6551984 6552020 chr2R 6552098 6552133 9 112 2.5 3.0 2.8 2.4 149 chr2R 6551984 intron jing + chr2R 6552058 intron jing + chr2R 6552133 intron jing + chr2R_9_6550001 chr2R_6550001 RAL-492 750 chr2R 6579758 6579805 chr2R 6584863 6584911 flea 12 5106 2.0 2.5 2.2 3.8 5153 chr2R 6579758 intron jing + chr2R 6582334 intron jing + chr2R 6584911 intron jing + chr2R_12_6580001 chr2R_6580001 RAL-492 751 chr2R 6612113 6612159 chr2R 6612213 6612239 8 95 3.0 3.5 3.2 1.9 126 chr2R 6612113 intron jing + chr2R 6612176 intron jing + chr2R 6612239 intron jing + chr2R_8_6610001 chr2R_6610001 RAL-492 752 chr2R 6633188 6633225 chr2R 6633273 6633322 7 92 4.0 1.5 2.8 1.8 134 chr2R 6633188 intergenic Vha16-1 -,Trap1 - chr2R 6633255 intergenic Vha16-1 -,Trap1 - chr2R 6633322 intergenic Vha16-1 -,Trap1 - chr2R_7_6630001 chr2R_6630001 RAL-492 753 chr2R 6646802 6646829 chr2R 6647071 6647102 8 285 2.5 1.5 2.0 2.7 300 chr2R 6646802 intergenic not near genes chr2R 6646952 intergenic not near genes chr2R 6647102 intergenic not near genes chr2R_8_6645001 chr2R_6645001 RAL-492 754 chr2R 6647319 6647338 chr2R 6647415 6647434 5 96 9.0 3.0 6.0 0.7 115 chr2R 6647319 intergenic not near genes chr2R 6647376 intergenic not near genes chr2R 6647434 intergenic not near genes chr2R_5_6645001 chr2R_6645001 RAL-492 755 chr2R 6699570 6699622 chr2R 6699675 6699727 6 105 0.5 1.0 0.8 3.3 157 chr2R 6699570 intergenic Rab2 + chr2R 6699648 intergenic Rab2 + chr2R 6699727 intergenic Rab2 +,CG3409 -,CG45092 - chr2R_6_6695001 chr2R_6695001 RAL-492 756 chr2R 6895417 6895435 chr2R 6895485 6895534 8 78 1.5 3.5 2.5 2.3 117 chr2R 6895417 intron CG30158 + chr2R 6895476 intron CG30158 + chr2R 6895534 intron CG30158 + chr2R_8_6895001 chr2R_6895001 RAL-492 757 chr2R 6952159 6952185 chr2R 6959759 6959785 opus 4 7600 1.0 3.5 2.2 1.2 7626 chr2R 6952159 intron,intron mim -,CheB42c - chr2R 6955972 intron,intron mim -,CheB42c - chr2R 6959785 intron,intron mim -,CheB42c - chr2R_4_6955001 chr2R_6955001 RAL-492 758 chr2R 6964263 6964288 chr2R 6964359 6964385 10 97 4.0 5.0 4.5 1.8 122 chr2R 6964263 intron,intron mim -,CheB42c - chr2R 6964324 intron,intron mim -,CheB42c - chr2R 6964385 intron,intron mim -,CheB42c - chr2R_10_6960001 chr2R_6960001 RAL-492 759 chr2R 6978622 6978669 chr2R 6978825 6978872 15 200 2.0 3.0 2.5 4.3 250 chr2R 6978622 intron vimar - chr2R 6978747 intron vimar - chr2R 6978872 intron vimar - chr2R_15_6975001 chr2R_6975001 RAL-492 760 chr2R 7160533 7160585 chr2R 7160631 7160683 13 97 4.0 3.5 3.8 2.7 150 chr2R 7160533 intron pk + chr2R 7160608 intron pk + chr2R 7160683 intron pk + chr2R_13_7160001 chr2R_7160001 RAL-492 761 chr2R 7164250 7164282 chr2R 7164461 7164489 6 210 4.0 8.5 6.2 0.8 239 chr2R 7164250 intron pk + chr2R 7164370 intron pk + chr2R 7164489 intron pk + chr2R_6_7160001 chr2R_7160001 RAL-492 762 chr2R 7196567 7196586 chr2R 7201352 7201381 F-element 6 4791 6.0 3.0 4.5 1.1 4814 chr2R 7196567 intron pk + chr2R 7198974 intron pk + chr2R 7201381 intron pk + chr2R_6_7195001 chr2R_7195001 RAL-492 763 chr2R 7209854 7209866 chr2R 7217590 7217634 roo 5 7762 3.0 2.5 2.8 1.3 7780 chr2R 7209854 intron pk + chr2R 7213744 intron pk + chr2R 7217634 intron pk + chr2R_5_7210001 chr2R_7210001 RAL-492 764 chr2R 7254803 7254841 chr2R 7254920 7254959 6 123 2.0 7.0 4.5 1.1 156 chr2R 7254803 5` UTR CR45280 + chr2R 7254881 5` UTR CR45280 + chr2R 7254959 5` UTR CR45280 + chr2R_6_7250001 chr2R_7250001 RAL-492 765 chr2R 7310751 7310796 chr2R 7310847 7310889 10 97 7.5 3.5 5.5 1.5 138 chr2R 7310751 intergenic not near genes chr2R 7310820 intergenic not near genes chr2R 7310889 intergenic not near genes chr2R_10_7310001 chr2R_7310001 RAL-492 766 chr2R 7389559 7389597 chr2R 7389681 7389715 8 118 7.0 5.0 6.0 1.1 156 chr2R 7389559 intron CG11107 + chr2R 7389637 intron CG11107 + chr2R 7389715 intron CG11107 + chr2R_8_7385001 chr2R_7385001 RAL-492 767 chr2R 7417895 7418168 chr2R 7418001 7418267 20 98 3.5 6.0 4.8 3.4 372 chr2R 7417895 intergenic not near genes chr2R 7418081 intergenic not near genes chr2R 7418267 intergenic not near genes chr2R_20_7415001 chr2R_7415001 RAL-492 768 chr2R 7434884 7434908 chr2R 7439205 7439229 Juan 8 4318 5.5 4.0 4.8 1.4 4345 chr2R 7434884 intergenic so + chr2R 7437056 intergenic not near genes chr2R 7439229 intergenic not near genes chr2R_8_7435001 chr2R_7435001 RAL-492 769 chr2R 7459261 7459287 chr2R 7459369 7459392 4 107 7.0 3.5 5.2 0.6 131 chr2R 7459261 intergenic Inos -,CG11141 - chr2R 7459326 intergenic CG11141 -,Inos - chr2R 7459392 intergenic CG11141 - chr2R_4_7455001 chr2R_7455001 RAL-492 770 chr2R 7608388 7608435 chr2R 7613611 7613643 I-element 11 5220 4.0 6.5 5.2 1.8 5255 chr2R 7608388 intron CG1358 - chr2R 7611016 intron CG1358 - chr2R 7613643 intron CG1358 - chr2R_11_7610001 chr2R_7610001 RAL-492 771 chr2R 7642850 7642890 chr2R 7642947 7642990 16 98 5.5 3.5 4.5 2.9 140 chr2R 7642850 intron CG43340 + chr2R 7642920 intron CG43340 + chr2R 7642990 intron CG43340 + chr2R_16_7640001 chr2R_7640001 RAL-492 772 chr2R 7737894 7738193 chr2R 7737993 7738289 12 97 10.0 7.0 8.5 1.3 395 chr2R 7737894 intergenic not near genes chr2R 7738092 intergenic not near genes chr2R 7738289 intergenic not near genes chr2R_12_7735001 chr2R_7735001 RAL-492 773 chr2R 7750804 7750821 chr2R 7750868 7750891 6 64 3.5 7.0 5.2 1.0 87 chr2R 7750804 intron,intron CG30497 -,CG45093 - chr2R 7750848 intron,intron CG30497 -,CG45093 - chr2R 7750891 intron,intron CG30497 -,CG45093 - chr2R_6_7750001 chr2R_7750001 RAL-492 774 chr2R 7815668 7815696 chr2R 7822153 7822184 Burdock 5 6488 8.5 4.0 6.2 0.7 6516 chr2R 7815668 intergenic CG1882 + chr2R 7818926 intergenic not near genes chr2R 7822184 3` UTR cathD - chr2R_5_7815001 chr2R_7815001 RAL-492 775 chr2R 7869173 7869182 chr2R 7873979 7873987 Doc 4 4806 9.5 7.5 8.5 0.4 4814 chr2R 7869173 intron Dgk - chr2R 7871580 intron Dgk - chr2R 7873987 intron Dgk - chr2R_4_7870001 chr2R_7870001 RAL-492 776 chr2R 7869188 7869221 chr2R 7873974 7873990 Doc 5 4794 3.0 7.0 5.0 0.8 4802 chr2R 7869188 intron Dgk - chr2R 7871589 intron Dgk - chr2R 7873990 intron Dgk - chr2R_5_7870001 chr2R_7870001 RAL-492 777 chr2R 7942912 7942959 chr2R 7943189 7943207 13 271 0.5 4.5 2.5 3.7 295 chr2R 7942912 intron CG14764 - chr2R 7943060 intron CG14764 - chr2R 7943207 intron CG14764 - chr2R_13_7940001 chr2R_7940001 RAL-492 778 chr2R 8015634 8015681 chr2R 8017677 8017720 13 2037 3.0 3.0 3.0 3.2 2086 chr2R 8015634 intergenic mir-4981 + chr2R 8016677 intergenic not near genes chr2R 8017720 intergenic not near genes chr2R_13_8015001 chr2R_8015001 RAL-492 779 chr2R 8067044 8067094 chr2R 8067148 8067197 20 102 3.0 5.0 4.0 4.0 153 chr2R 8067044 intron CG17977 - chr2R 8067120 intron CG17977 - chr2R 8067197 exon CG17977 - chr2R_20_8065001 chr2R_8065001 RAL-492 780 chr2R 8076660 8076705 chr2R 8076760 8076805 18 97 9.5 3.0 6.2 2.5 145 chr2R 8076660 intron lig + chr2R 8076732 intron lig + chr2R 8076805 intron lig + chr2R_18_8075001 chr2R_8075001 RAL-492 781 chr2R 8089241 8089248 chr2R 8089347 8089354 4 106 7.5 5.0 6.2 0.6 113 chr2R 8089241 3` UTR sut2 + chr2R 8089298 intergenic sut2 +,sut3 + chr2R 8089354 intergenic sut2 +,sut3 + chr2R_4_8085001 chr2R_8085001 RAL-492 782 chr2R 8089251 8089273 chr2R 8089346 8089379 10 105 4.5 5.0 4.8 1.7 128 chr2R 8089251 3` UTR sut2 + chr2R 8089315 intergenic sut2 +,sut3 + chr2R 8089379 intergenic sut2 +,sut3 + chr2R_10_8085001 chr2R_8085001 RAL-492 783 chr2R 8155561 8155611 chr2R 8155670 8155693 14 101 2.0 2.0 2.0 4.7 132 chr2R 8155561 intron,intron Lpin -,kermit - chr2R 8155627 intron,intron Lpin -,kermit - chr2R 8155693 intron,intron Lpin -,kermit - chr2R_14_8155001 chr2R_8155001 RAL-492 784 chr2R 8166547 8166555 chr2R 8168716 8168755 14 2184 32.5 45.0 38.8 0.4 2208 chr2R 8166547 exon Rs1 + chr2R 8167651 exon Rs1 + chr2R 8168755 exon Gasz + chr2R_14_8165001 chr2R_8165001 RAL-492 785 chr2R 8188190 8188224 chr2R 8188304 8188339 10 115 6.0 7.0 6.5 1.3 149 chr2R 8188190 intron LRP1 + chr2R 8188264 intron LRP1 + chr2R 8188339 intron LRP1 + chr2R_10_8185001 chr2R_8185001 RAL-492 786 chr2R 8277616 8277651 chr2R 8277730 8277766 13 107 6.5 3.5 5.0 2.2 150 chr2R 8277616 5` UTR CR44280 + chr2R 8277691 5` UTR CR44280 + chr2R 8277766 5` UTR CR44280 + chr2R_13_8275001 chr2R_8275001 RAL-492 787 chr2R 8277658 8277667 chr2R 8277729 8277782 4 102 4.5 3.5 4.0 0.8 124 chr2R 8277658 5` UTR CR44280 + chr2R 8277720 5` UTR CR44280 + chr2R 8277782 5` UTR CR44280 + chr2R_4_8275001 chr2R_8275001 RAL-492 788 chr2R 8330852 8330890 chr2R 8331358 8331395 roo 16 505 5.5 4.0 4.8 2.8 543 chr2R 8330852 intron pdm3 + chr2R 8331124 intron pdm3 + chr2R 8331395 intron pdm3 + chr2R_16_8330001 chr2R_8330001 RAL-492 789 chr2R 8338625 8338667 chr2R 8338727 8338754 8 98 0.0 2.0 1.0 4.0 129 chr2R 8338625 intron pdm3 + chr2R 8338690 intron pdm3 + chr2R 8338754 intron pdm3 + chr2R_8_8335001 chr2R_8335001 RAL-492 790 chr2R 8398206 8398241 chr2R 8402995 8403042 Doc 10 4793 4.5 8.0 6.2 1.4 4836 chr2R 8398206 intron CG2121 - chr2R 8400624 intron CG2121 - chr2R 8403042 intron CG2121 - chr2R_10_8400001 chr2R_8400001 RAL-492 791 chr2R 8512761 8512771 chr2R 8512860 8512870 5 98 3.0 6.5 4.8 0.9 109 chr2R 8512761 intron mtt - chr2R 8512816 intron mtt - chr2R 8512870 intron mtt - chr2R_5_8510001 chr2R_8510001 RAL-492 792 chr2R 8512775 8512792 chr2R 8512855 8512890 7 93 1.5 5.5 3.5 1.6 115 chr2R 8512775 intron mtt - chr2R 8512832 intron mtt - chr2R 8512890 intron mtt - chr2R_7_8510001 chr2R_8510001 RAL-492 793 chr2R 8512794 8512799 chr2R 8512845 8512877 4 81 2.0 3.5 2.8 1.1 83 chr2R 8512794 intron mtt - chr2R 8512836 intron mtt - chr2R 8512877 intron mtt - chr2R_4_8510001 chr2R_8510001 RAL-492 794 chr2R 8517696 8517737 chr2R 8517818 8517859 7 120 2.5 2.5 2.5 2.0 163 chr2R 8517696 intron mtt - chr2R 8517778 intron mtt - chr2R 8517859 intron mtt - chr2R_7_8515001 chr2R_8515001 RAL-492 795 chr2R 8524950 8524980 chr2R 8525086 8525139 11 156 5.0 2.5 3.8 2.3 189 chr2R 8524950 intron mtt - chr2R 8525044 intron mtt - chr2R 8525139 intron mtt - chr2R_11_8525001 chr2R_8525001 RAL-492 796 chr2R 8565392 8565407 chr2R 8565463 8565495 9 86 4.0 0.5 2.2 2.8 103 chr2R 8565392 exon Cyp6a14 - chr2R 8565444 exon Cyp6a14 - chr2R 8565495 exon Cyp6a14 - chr2R_9_8565001 chr2R_8565001 RAL-492 797 chr2R 8600199 8600229 chr2R 8600296 8600326 8 96 2.5 2.5 2.5 2.3 127 chr2R 8600199 intergenic rgr +,CG8735 - chr2R 8600262 intergenic rgr +,CG8735 - chr2R 8600326 intergenic rgr +,CG8735 - chr2R_8_8600001 chr2R_8600001 RAL-492 798 chr2R 8600234 8600246 chr2R 8600289 8600343 5 88 2.5 2.0 2.2 1.6 109 chr2R 8600234 intergenic rgr +,CG8735 - chr2R 8600288 intergenic rgr +,CG8735 - chr2R 8600343 intergenic rgr +,CG8735 - chr2R_5_8600001 chr2R_8600001 RAL-492 799 chr2R 8612561 8612608 chr2R 8612658 8612705 7 97 2.0 1.0 1.5 2.8 144 chr2R 8612561 intron CG8642 - chr2R 8612633 intron CG8642 - chr2R 8612705 intron CG8642 - chr2R_7_8610001 chr2R_8610001 RAL-492 800 chr2R 8677553 8677593 chr2R 8677657 8677697 15 103 5.5 3.5 4.5 2.7 144 chr2R 8677553 intron,exon Acsl +,CG30354 + chr2R 8677625 intron,3` UTR Acsl +,CG30354 + chr2R 8677697 intron Acsl + chr2R_15_8675001 chr2R_8675001 RAL-492 801 chr2R 8722757 8722789 chr2R 8723003 8723023 pogo 16 254 6.0 5.5 5.8 2.4 266 chr2R 8722757 intron CG14767 - chr2R 8722890 intron CG14767 - chr2R 8723023 intron CG14767 - chr2R_16_8720001 chr2R_8720001 RAL-492 802 chr2R 8777930 8777937 chr2R 8784153 8784161 diver 5 6223 2.0 6.5 4.2 1.0 6231 chr2R 8777930 intergenic not near genes chr2R 8781046 intergenic not near genes chr2R 8784161 intergenic not near genes chr2R_5_8780001 chr2R_8780001 RAL-492 803 chr2R 8777939 8777946 chr2R 8784136 8784170 diver 4 6217 2.0 5.5 3.8 0.8 6231 chr2R 8777939 intergenic not near genes chr2R 8781054 intergenic not near genes chr2R 8784170 intergenic not near genes chr2R_4_8780001 chr2R_8780001 RAL-492 804 chr2R 8849211 8849254 chr2R 8849309 8849352 12 98 6.0 1.5 3.8 2.5 141 chr2R 8849211 intron sns + chr2R 8849282 intron sns + chr2R 8849352 intron sns + chr2R_12_8845001 chr2R_8845001 RAL-492 805 chr2R 8966136 8966178 chr2R 8966245 8966288 11 107 7.0 5.0 6.0 1.6 152 chr2R 8966136 intron CG8216 - chr2R 8966212 intron CG8216 - chr2R 8966288 intron CG8216 - chr2R_11_8965001 chr2R_8965001 RAL-492 806 chr2R 9031388 9031435 chr2R 9031483 9031521 10 91 3.5 0.0 1.8 3.6 133 chr2R 9031388 intergenic CG8170 - chr2R 9031454 intergenic CG8170 - chr2R 9031521 intergenic CG8170 - chr2R_10_9030001 chr2R_9030001 RAL-492 807 chr2R 9062017 9062051 chr2R 9062210 9062240 10 196 3.0 7.0 5.0 1.7 223 chr2R 9062017 intergenic CG8197 -,ana + chr2R 9062128 intergenic ana +,CG8197 - chr2R 9062240 intergenic ana +,CG8197 - chr2R_10_9060001 chr2R_9060001 RAL-492 808 chr2R 9065894 9065949 chr2R 9065996 9066051 20 99 3.0 1.5 2.2 6.2 157 chr2R 9065894 intron ana + chr2R 9065972 intron ana + chr2R 9066051 intron ana + chr2R_20_9065001 chr2R_9065001 RAL-492 809 chr2R 9151291 9151317 chr2R 9157771 9157807 Burdock 9 6486 9.0 2.5 5.8 1.3 6516 chr2R 9151291 exon CG30345 + chr2R 9154549 intergenic not near genes chr2R 9157807 intergenic CG8008 - chr2R_9_9150001 chr2R_9150001 RAL-492 810 chr2R 9183119 9183161 chr2R 9183221 9183263 7 101 2.0 4.5 3.2 1.7 144 chr2R 9183119 intron ltd - chr2R 9183191 intron ltd - chr2R 9183263 intron ltd - chr2R_7_9180001 chr2R_9180001 RAL-492 811 chr2R 9198817 9198829 chr2R 9198942 9198953 5 125 3.0 8.0 5.5 0.8 136 chr2R 9198817 intron unpg + chr2R 9198885 intron unpg + chr2R 9198953 intron unpg + chr2R_5_9195001 chr2R_9195001 RAL-492 812 chr2R 9212676 9212689 chr2R 9213182 9213195 roo 7 505 11.5 3.0 7.2 0.9 519 chr2R 9212676 intergenic CR45309 + chr2R 9212936 intergenic CR45309 + chr2R 9213195 5` UTR CR45309 + chr2R_7_9210001 chr2R_9210001 RAL-492 813 chr2R 9212695 9212717 chr2R 9213177 9213221 roo 9 497 5.5 3.0 4.2 1.7 526 chr2R 9212695 intergenic CR45309 + chr2R 9212958 intergenic CR45309 + chr2R 9213221 5` UTR CR45309 + chr2R_9_9210001 chr2R_9210001 RAL-492 814 chr2R 9230203 9230239 chr2R 9230303 9230336 10 94 6.5 0.5 3.5 2.2 133 chr2R 9230203 intron hig - chr2R 9230270 intron hig - chr2R 9230336 exon hig - chr2R_10_9230001 chr2R_9230001 RAL-492 815 chr2R 9270450 9270456 chr2R 9270536 9270560 4 101 3.5 5.5 4.5 0.7 110 chr2R 9270450 intron Pkn - chr2R 9270505 intron Pkn - chr2R 9270560 intron Pkn - chr2R_4_9270001 chr2R_9270001 RAL-492 816 chr2R 9270461 9270475 chr2R 9270532 9270582 8 87 1.0 4.5 2.8 2.1 121 chr2R 9270461 intron Pkn - chr2R 9270522 intron Pkn - chr2R 9270582 intron Pkn - chr2R_8_9270001 chr2R_9270001 RAL-492 817 chr2R 9368123 9368134 chr2R 9368202 9368230 5 83 6.5 1.5 4.0 1.0 107 chr2R 9368123 intron CG13954 - chr2R 9368176 intron CG13954 - chr2R 9368230 intron CG13954 - chr2R_5_9365001 chr2R_9365001 RAL-492 818 chr2R 9368140 9368147 chr2R 9368201 9368205 5 77 6.0 1.5 3.8 1.0 65 chr2R 9368140 intron CG13954 - chr2R 9368172 intron CG13954 - chr2R 9368205 intron CG13954 - chr2R_5_9365001 chr2R_9365001 RAL-492 819 chr2R 9378089 9378140 chr2R 9378191 9378237 18 92 3.5 4.5 4.0 3.6 148 chr2R 9378089 intron CG13954 - chr2R 9378163 intron CG13954 - chr2R 9378237 intron CG13954 - chr2R_18_9375001 chr2R_9375001 RAL-492 820 chr2R 9480068 9480100 chr2R 9490616 9490651 roo 9 10550 2.5 6.0 4.2 1.7 10583 chr2R 9480068 intergenic not near genes chr2R 9485360 intergenic not near genes chr2R 9490651 intergenic not near genes chr2R_9_9485001 chr2R_9485001 RAL-492 821 chr2R 9557043 9557087 chr2R 9557201 9557243 20 162 4.0 4.0 4.0 4.0 200 chr2R 9557043 intergenic not near genes chr2R 9557143 intergenic not near genes chr2R 9557243 intergenic not near genes chr2R_20_9555001 chr2R_9555001 RAL-492 822 chr2R 9561804 9561847 chr2R 9561911 9561955 9 108 0.0 0.0 0.0 9.0 151 chr2R 9561804 3` UTR,intron CR45281 -,CG1809 + chr2R 9561880 3` UTR,intron CR45281 -,CG1809 + chr2R 9561955 3` UTR,intron CR45281 -,CG1809 + chr2R_9_9560001 chr2R_9560001 RAL-492 823 chr2R 9616620 9616644 chr2R 9616745 9616769 8 124 10.5 3.5 7.0 1.0 149 chr2R 9616620 intron Mmp2 - chr2R 9616694 intron Mmp2 - chr2R 9616769 intron Mmp2 - chr2R_8_9615001 chr2R_9615001 RAL-492 824 chr2R 9672061 9672079 chr2R 9672183 9672202 7 123 2.5 5.0 3.8 1.5 141 chr2R 9672061 intron Mmp2 - chr2R 9672132 intron Mmp2 - chr2R 9672202 intron Mmp2 - chr2R_7_9670001 chr2R_9670001 RAL-492 825 chr2R 9680976 9681015 chr2R 9681160 9681199 12 185 7.5 5.0 6.2 1.7 223 chr2R 9680976 intron Mmp2 - chr2R 9681088 intron Mmp2 - chr2R 9681199 intron Mmp2 - chr2R_12_9680001 chr2R_9680001 RAL-492 826 chr2R 9770044 9770091 chr2R 9770156 9770168 6 100 2.0 1.5 1.8 2.1 124 chr2R 9770044 intron CG1688 - chr2R 9770106 intron CG1688 - chr2R 9770168 intron CG1688 - chr2R_6_9770001 chr2R_9770001 RAL-492 827 chr2R 9859198 9859233 chr2R 9861528 9861575 12 2332 33.5 20.5 27.0 0.4 2377 chr2R 9859198 intron CG1516 - chr2R 9860386 intron CG1516 - chr2R 9861575 intergenic CR44293 +,CG1516 - chr2R_12_9860001 chr2R_9860001 RAL-492 828 chr2R 9871039 9871060 chr2R 9871545 9871546 roo 8 502 3.0 5.0 4.0 1.6 507 chr2R 9871039 intron cbx - chr2R 9871292 intron cbx - chr2R 9871546 intron,5` UTR cbx -,CG18446 + chr2R_8_9870001 chr2R_9870001 RAL-492 829 chr2R 9871066 9871074 chr2R 9871541 9871577 roo 5 494 3.0 5.0 4.0 1.0 511 chr2R 9871066 intron cbx - chr2R 9871322 intron cbx - chr2R 9871577 intron,5` UTR cbx -,CG18446 + chr2R_5_9870001 chr2R_9870001 RAL-492 830 chr2R 9928400 9928450 chr2R 9928544 9928595 10 140 2.5 3.0 2.8 2.6 195 chr2R 9928400 intron Mef2 - chr2R 9928498 intron Mef2 - chr2R 9928595 intron Mef2 - chr2R_10_9925001 chr2R_9925001 RAL-492 831 chr2R 9935005 9935057 chr2R 9935107 9935159 9 102 3.0 3.5 3.2 2.1 154 chr2R 9935005 intron Mef2 - chr2R 9935082 intron Mef2 - chr2R 9935159 intron Mef2 - chr2R_9_9935001 chr2R_9935001 RAL-492 832 chr2R 9945418 9945472 chr2R 9945634 9945652 BS 15 213 3.5 4.5 4.0 3.0 234 chr2R 9945418 intron Mef2 - chr2R 9945535 intron Mef2 - chr2R 9945652 intron Mef2 - chr2R_15_9945001 chr2R_9945001 RAL-492 833 chr2R 9963353 9963366 chr2R 9963491 9963504 6 138 4.5 6.5 5.5 0.9 151 chr2R 9963353 exon Pal1 + chr2R 9963428 3` UTR Pal1 + chr2R 9963504 3` UTR Pal1 + chr2R_6_9960001 chr2R_9960001 RAL-492 834 chr2R 9963367 9963399 chr2R 9963488 9963531 11 135 1.5 5.5 3.5 2.4 164 chr2R 9963367 3` UTR Pal1 + chr2R 9963449 3` UTR Pal1 + chr2R 9963531 3` UTR Pal1 + chr2R_11_9960001 chr2R_9960001 RAL-492 835 chr2R 9966945 9966988 chr2R 9967066 9967109 13 117 3.0 4.0 3.5 2.9 164 chr2R 9966945 intergenic CG12133 + chr2R 9967027 intergenic CG12133 + chr2R 9967109 intergenic CG12133 + chr2R_13_9965001 chr2R_9965001 RAL-492 836 chr2R 9975913 9975925 chr2R 9976032 9976058 6 130 8.5 0.5 4.5 1.1 145 chr2R 9975913 intergenic not near genes chr2R 9975986 intergenic not near genes chr2R 9976058 intergenic not near genes chr2R_6_9975001 chr2R_9975001 RAL-492 837 chr2R 9975926 9975941 chr2R 9976031 9976038 5 113 5.5 0.5 3.0 1.2 112 chr2R 9975926 intergenic not near genes chr2R 9975982 intergenic not near genes chr2R 9976038 intergenic not near genes chr2R_5_9975001 chr2R_9975001 RAL-492 838 chr2R 10017645 10017681 chr2R 10017727 10017761 11 95 2.0 5.5 3.8 2.3 116 chr2R 10017645 intron Pka-R2 - chr2R 10017703 intron Pka-R2 - chr2R 10017761 intron Pka-R2 - chr2R_11_10015001 chr2R_10015001 RAL-492 839 chr2R 10132170 10132217 chr2R 10132270 10132317 9 100 4.0 4.0 4.0 1.8 147 chr2R 10132170 intron gem + chr2R 10132244 intron gem + chr2R 10132317 exon gem + chr2R_9_10130001 chr2R_10130001 RAL-492 840 chr2R 10155837 10155884 chr2R 10155951 10155998 11 113 2.0 1.5 1.8 3.9 161 chr2R 10155837 intron KCNQ - chr2R 10155918 intron,3` UTR KCNQ -,mlt - chr2R 10155998 intron,3` UTR KCNQ -,mlt - chr2R_11_10155001 chr2R_10155001 RAL-492 841 chr2R 10168338 10168361 chr2R 10168433 10168458 8 92 3.0 10.0 6.5 1.1 120 chr2R 10168338 intron KCNQ - chr2R 10168398 intron KCNQ - chr2R 10168458 intron KCNQ - chr2R_8_10165001 chr2R_10165001 RAL-492 842 chr2R 10176866 10176912 chr2R 10186053 10186099 roo 10 9185 4.0 1.5 2.8 2.6 9233 chr2R 10176866 intron KCNQ - chr2R 10181482 intron KCNQ - chr2R 10186099 intron KCNQ - chr2R_10_10180001 chr2R_10180001 RAL-492 843 chr2R 10189201 10189236 chr2R 10189299 10189334 9 97 1.0 1.0 1.0 4.5 133 chr2R 10189201 intron KCNQ - chr2R 10189268 intron KCNQ - chr2R 10189334 intron KCNQ - chr2R_9_10185001 chr2R_10185001 RAL-492 844 chr2R 10194379 10194396 chr2R 10194544 10194560 7 165 7.0 5.5 6.2 1.0 181 chr2R 10194379 intergenic not near genes chr2R 10194470 intergenic not near genes chr2R 10194560 intergenic not near genes chr2R_7_10190001 chr2R_10190001 RAL-492 845 chr2R 10197366 10197417 chr2R 10197472 10197523 12 103 1.0 3.0 2.0 4.0 157 chr2R 10197366 3` UTR CG34221 - chr2R 10197444 3` UTR CG34221 - chr2R 10197523 3` UTR CG34221 - chr2R_12_10195001 chr2R_10195001 RAL-492 846 chr2R 10290100 10290141 chr2R 10290201 10290242 14 99 1.5 3.0 2.2 4.4 142 chr2R 10290100 intron CAP + chr2R 10290171 intron CAP + chr2R 10290242 intron CAP + chr2R_14_10290001 chr2R_10290001 RAL-492 847 chr2R 10300628 10300676 chr2R 10300743 10300791 9 116 0.5 0.0 0.2 7.5 163 chr2R 10300628 intron CAP + chr2R 10300710 intron CAP + chr2R 10300791 intron CAP + chr2R_9_10300001 chr2R_10300001 RAL-492 848 chr2R 10313326 10313349 chr2R 10313415 10313457 5 98 1.0 4.5 2.8 1.3 131 chr2R 10313326 intergenic not near genes chr2R 10313392 intergenic Ndg + chr2R 10313457 intergenic Ndg + chr2R_5_10310001 chr2R_10310001 RAL-492 849 chr2R 10322069 10322079 chr2R 10322171 10322181 5 101 1.5 5.5 3.5 1.1 112 chr2R 10322069 3` UTR Ndg + chr2R 10322125 intergenic Ndg + chr2R 10322181 intergenic Ndg + chr2R_5_10320001 chr2R_10320001 RAL-492 850 chr2R 10352658 10352702 chr2R 10352749 10352799 15 92 5.0 5.5 5.2 2.4 141 chr2R 10352658 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352728 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352799 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_15_10350001 chr2R_10350001 RAL-492 851 chr2R 10409041 10409084 chr2R 10409139 10409180 11 96 0.5 0.0 0.2 9.2 139 chr2R 10409041 intron CG42732 - chr2R 10409110 intron CG42732 - chr2R 10409180 intron,exon CG42732 -,CG33477 - chr2R_11_10405001 chr2R_10405001 RAL-492 852 chr2R 10449179 10449222 chr2R 10449507 10449550 14 324 7.5 6.0 6.8 1.8 371 chr2R 10449179 intron Galphao + chr2R 10449364 intron,3` UTR Galphao +,Cyp49a1 - chr2R 10449550 intron,3` UTR Galphao +,Cyp49a1 - chr2R_14_10445001 chr2R_10445001 RAL-492 853 chr2R 10454084 10454117 chr2R 10454174 10454211 19 92 6.0 9.0 7.5 2.2 127 chr2R 10454084 intron,intron Galphao +,Cyp49a1 - chr2R 10454148 intron,intron Galphao +,Cyp49a1 - chr2R 10454211 intron,intron Galphao +,Cyp49a1 - chr2R_19_10450001 chr2R_10450001 RAL-492 854 chr2R 10454122 10454129 chr2R 10454172 10454225 9 87 6.0 8.5 7.2 1.1 103 chr2R 10454122 intron,intron Galphao +,Cyp49a1 - chr2R 10454174 intron,intron Galphao +,Cyp49a1 - chr2R 10454225 intron,intron Galphao +,Cyp49a1 - chr2R_9_10450001 chr2R_10450001 RAL-492 855 chr2R 10469002 10469052 chr2R 10469147 10469198 24 144 2.0 4.5 3.2 5.7 196 chr2R 10469002 intron CG11777 + chr2R 10469100 intron CG11777 + chr2R 10469198 intron CG11777 + chr2R_24_10465001 chr2R_10465001 RAL-492 856 chr2R 10743412 10743449 chr2R 10743515 10743551 13 96 4.0 5.0 4.5 2.4 139 chr2R 10743412 intron CG33144 - chr2R 10743482 intron CG33144 - chr2R 10743551 intron CG33144 - chr2R_13_10740001 chr2R_10740001 RAL-492 857 chr2R 10773259 10773274 chr2R 10773329 10773335 5 74 2.5 1.5 2.0 1.7 76 chr2R 10773259 intron CG33144 - chr2R 10773297 intron CG33144 - chr2R 10773335 intron CG33144 - chr2R_5_10770001 chr2R_10770001 RAL-492 858 chr2R 10791022 10791068 chr2R 10791125 10791169 10 103 3.0 1.0 2.0 3.3 147 chr2R 10791022 intron CG33144 - chr2R 10791096 intron CG33144 - chr2R 10791169 intron CG33144 - chr2R_10_10790001 chr2R_10790001 RAL-492 859 chr2R 10800095 10800143 chr2R 10800197 10800245 7 101 3.5 2.5 3.0 1.8 150 chr2R 10800095 intergenic wde - chr2R 10800170 intergenic wde - chr2R 10800245 intergenic wde - chr2R_7_10800001 chr2R_10800001 RAL-492 860 chr2R 10827345 10827355 chr2R 10827420 10827463 5 98 6.0 3.5 4.8 0.9 118 chr2R 10827345 exon CG12325 + chr2R 10827404 3` UTR CG12325 + chr2R 10827463 3` UTR,3` UTR CG12325 +,CG12344 - chr2R_5_10825001 chr2R_10825001 RAL-492 861 chr2R 10834239 10834271 chr2R 10834691 10834726 8 455 32.0 32.5 32.2 0.2 487 chr2R 10834239 intron CG12344 - chr2R 10834482 intron CG12344 - chr2R 10834726 intron CG12344 - chr2R_8_10830001 chr2R_10830001 RAL-492 862 chr2R 10860577 10860585 chr2R 10860668 10860681 4 94 0.0 2.0 1.0 2.0 104 chr2R 10860577 intron CG30015 - chr2R 10860629 intron CG30015 - chr2R 10860681 intron CG30015 - chr2R_4_10860001 chr2R_10860001 RAL-492 863 chr2R 10862576 10862603 chr2R 10862691 10862734 9 129 1.5 0.5 1.0 4.5 158 chr2R 10862576 intron CG30015 - chr2R 10862655 intron CG30015 - chr2R 10862734 intron CG30015 - chr2R_9_10860001 chr2R_10860001 RAL-492 864 chr2R 10937803 10937832 chr2R 10937941 10937989 14 156 0.0 4.5 2.2 4.4 186 chr2R 10937803 intergenic not near genes chr2R 10937896 intergenic not near genes chr2R 10937989 intergenic Spn47C - chr2R_14_10935001 chr2R_10935001 RAL-492 865 chr2R 10948029 10948062 chr2R 10955576 10955579 17.6 8 7550 1.0 5.0 3.0 2.0 7550 chr2R 10948029 intergenic not near genes chr2R 10951804 intergenic not near genes chr2R 10955579 intergenic not near genes chr2R_8_10950001 chr2R_10950001 RAL-492 866 chr2R 10959076 10959106 chr2R 10959172 10959205 6 98 3.0 2.5 2.8 1.6 129 chr2R 10959076 intergenic not near genes chr2R 10959140 intergenic not near genes chr2R 10959205 intergenic not near genes chr2R_6_10955001 chr2R_10955001 RAL-492 867 chr2R 10974720 10974748 chr2R 10974826 10974855 4 105 0.5 0.5 0.5 2.7 135 chr2R 10974720 intergenic not near genes chr2R 10974788 intergenic not near genes chr2R 10974855 intergenic not near genes chr2R_4_10970001 chr2R_10970001 RAL-492 868 chr2R 10985078 10985109 chr2R 10985182 10985212 5 104 3.5 3.5 3.5 1.1 134 chr2R 10985078 intron luna - chr2R 10985145 intron luna - chr2R 10985212 intron luna - chr2R_5_10985001 chr2R_10985001 RAL-492 869 chr2R 11009803 11009815 chr2R 11018997 11019008 roo 4 9194 8.0 8.0 8.0 0.4 9205 chr2R 11009803 intron luna - chr2R 11014406 intron luna - chr2R 11019008 intron luna - chr2R_4_11010001 chr2R_11010001 RAL-492 870 chr2R 11009821 11009843 chr2R 11018988 11019007 roo 4 9171 4.0 7.5 5.8 0.6 9186 chr2R 11009821 intron luna - chr2R 11014414 intron luna - chr2R 11019007 intron luna - chr2R_4_11010001 chr2R_11010001 RAL-492 871 chr2R 11019886 11019910 chr2R 11024944 11024945 jockey 4 5062 1.0 3.5 2.2 1.2 5059 chr2R 11019886 intron luna - chr2R 11022416 intron luna - chr2R 11024945 intron luna - chr2R_4_11020001 chr2R_11020001 RAL-492 872 chr2R 11032631 11032666 chr2R 11032740 11032777 11 109 3.5 3.5 3.5 2.4 146 chr2R 11032631 intron luna - chr2R 11032704 intron luna - chr2R 11032777 intron luna - chr2R_11_11030001 chr2R_11030001 RAL-492 873 chr2R 11179257 11179282 chr2R 11179363 11179388 6 106 3.5 7.0 5.2 1.0 131 chr2R 11179257 intron shn + chr2R 11179322 intron shn + chr2R 11179388 intron shn + chr2R_6_11175001 chr2R_11175001 RAL-492 874 chr2R 11207802 11207822 chr2R 11208015 11208035 BS 4 210 9.5 6.0 7.8 0.5 233 chr2R 11207802 intron shn + chr2R 11207918 intron shn + chr2R 11208035 intron shn + chr2R_4_11205001 chr2R_11205001 RAL-492 875 chr2R 11207826 11207845 chr2R 11208013 11208053 BS 6 203 6.5 6.0 6.2 0.8 227 chr2R 11207826 intron shn + chr2R 11207940 intron shn + chr2R 11208053 intron shn + chr2R_6_11205001 chr2R_11205001 RAL-492 876 chr2R 11292949 11292996 chr2R 11293047 11293113 7 96 2.0 0.5 1.2 3.2 164 chr2R 11292949 exon,3` UTR dare -,CG30033 + chr2R 11293031 5` UTR,3` UTR dare -,CG30033 + chr2R 11293113 5` UTR,3` UTR dare -,CG30033 + chr2R_7_11290001 chr2R_11290001 RAL-492 877 chr2R 11368009 11368039 chr2R 11368105 11368134 4 96 4.0 3.0 3.5 0.9 125 chr2R 11368009 intron CG13204 + chr2R 11368072 intron CG13204 + chr2R 11368134 intron CG13204 + chr2R_4_11365001 chr2R_11365001 RAL-492 878 chr2R 11415528 11415547 chr2R 11418677 11418715 opus 6 3165 2.5 10.0 6.2 0.8 3187 chr2R 11415528 intron Drip - chr2R 11417122 intron Drip - chr2R 11418715 intron Drip - chr2R_6_11415001 chr2R_11415001 RAL-492 879 chr2R 11472633 11472678 chr2R 11473845 11473894 pogo 18 1214 3.5 7.0 5.2 2.9 1261 chr2R 11472633 intergenic not near genes chr2R 11473264 intergenic not near genes chr2R 11473894 intergenic not near genes chr2R_18_11470001 chr2R_11470001 RAL-492 880 chr2R 11555376 11555422 chr2R 11555731 11555763 9 353 1.5 2.5 2.0 3.0 387 chr2R 11555376 intergenic not near genes chr2R 11555570 intergenic not near genes chr2R 11555763 intergenic not near genes chr2R_9_11555001 chr2R_11555001 RAL-492 881 chr2R 11614602 11614798 chr2R 11614710 11614898 14 107 1.5 1.5 1.5 5.6 296 chr2R 11614602 intron tou - chr2R 11614750 intron tou - chr2R 11614898 intron tou - chr2R_14_11610001 chr2R_11610001 RAL-492 882 chr2R 11660348 11660394 chr2R 11660485 11660531 7 137 0.0 2.0 1.0 3.5 183 chr2R 11660348 intron Roc2 - chr2R 11660440 intron Roc2 - chr2R 11660531 intron Roc2 - chr2R_7_11660001 chr2R_11660001 RAL-492 883 chr2R 11667369 11667401 chr2R 11667483 11667513 8 113 2.0 3.0 2.5 2.3 144 chr2R 11667369 intron,intron Roc2 -,Tret1-1 + chr2R 11667441 intron,intron Roc2 -,Tret1-1 + chr2R 11667513 intron,intron Roc2 -,Tret1-1 + chr2R_8_11665001 chr2R_11665001 RAL-492 884 chr2R 11677860 11677897 chr2R 11677957 11677994 6 97 6.0 3.0 4.5 1.1 134 chr2R 11677860 intron,exon Roc2 -,Tret1-2 + chr2R 11677927 intron,3` UTR Roc2 -,Tret1-2 + chr2R 11677994 intron,3` UTR Roc2 -,Tret1-2 + chr2R_6_11675001 chr2R_11675001 RAL-492 885 chr2R 11822961 11823004 chr2R 11823058 11823101 10 95 4.5 2.5 3.5 2.2 140 chr2R 11822961 intergenic not near genes chr2R 11823031 intergenic not near genes chr2R 11823101 intergenic not near genes chr2R_10_11820001 chr2R_11820001 RAL-492 886 chr2R 11863876 11863887 chr2R 11863947 11863994 4 96 2.5 1.5 2.0 1.3 118 chr2R 11863876 intergenic CG42531 + chr2R 11863935 intergenic CG42531 + chr2R 11863994 intergenic CG42531 + chr2R_4_11860001 chr2R_11860001 RAL-492 887 chr2R 12061036 12061075 chr2R 12061136 12061156 5 94 3.5 0.0 1.8 1.8 120 chr2R 12061036 intron Drep-3 + chr2R 12061096 intron Drep-3 + chr2R 12061156 intron Drep-3 + chr2R_5_12060001 chr2R_12060001 RAL-492 888 chr2R 12093930 12093978 chr2R 12094063 12094111 8 129 4.0 1.0 2.5 2.3 181 chr2R 12093930 intron jeb - chr2R 12094020 intron jeb - chr2R 12094111 intron jeb - chr2R_8_12090001 chr2R_12090001 RAL-492 889 chr2R 12145920 12145941 chr2R 12148595 12148615 5 2676 37.0 37.0 37.0 0.1 2695 chr2R 12145920 exon Hen1 + chr2R 12147268 intron,intron Hen1 +,CG8878 - chr2R 12148615 intron,exon Hen1 +,CG8878 - chr2R_5_12145001 chr2R_12145001 RAL-492 890 chr2R 12145915 12145924 chr2R 12148616 12148637 10 2689 32.5 33.5 33.0 0.3 2722 chr2R 12145915 exon Hen1 + chr2R 12147276 intron,intron Hen1 +,CG8878 - chr2R 12148637 intron,exon Hen1 +,CG8878 - chr2R_10_12145001 chr2R_12145001 RAL-492 891 chr2R 12185985 12186031 chr2R 12186100 12186122 14 108 0.5 2.0 1.2 6.4 137 chr2R 12185985 intron Cyp6g1 + chr2R 12186054 intron Cyp6g1 + chr2R 12186122 intron Cyp6g1 + chr2R_14_12185001 chr2R_12185001 RAL-492 892 chr2R 12185222 12185227 chr2R 12188127 12188140 7 2906 28.5 154.5 91.5 0.1 2918 chr2R 12185222 3` UTR,exon CG13175 +,CG33964 + chr2R 12186681 exon Cyp6g1 + chr2R 12188140 3` UTR Cyp6g1 + chr2R_7_12185001 chr2R_12185001 RAL-492 893 chr2R 12187475 12187484 chr2R 12190073 12190083 8 2597 81.5 82.5 82.0 0.1 2608 chr2R 12187475 exon Cyp6g1 + chr2R 12188779 exon Cyp6g2 - chr2R 12190083 exon Cyp6g2 - chr2R_8_12185001 chr2R_12185001 RAL-492 894 chr2R 12187473 12187508 chr2R 12190098 12190124 25 2617 102.5 69.5 86.0 0.3 2651 chr2R 12187473 exon Cyp6g1 + chr2R 12188798 exon Cyp6g2 - chr2R 12190124 exon Cyp6g2 - chr2R_25_12185001 chr2R_12185001 RAL-492 895 chr2R 12217563 12217600 chr2R 12217656 12217687 13 95 2.5 4.5 3.5 2.9 124 chr2R 12217563 intergenic not near genes chr2R 12217625 intergenic not near genes chr2R 12217687 intergenic not near genes chr2R_13_12215001 chr2R_12215001 RAL-492 896 chr2R 12279039 12279059 chr2R 12279172 12279192 7 133 2.5 4.5 3.5 1.6 153 chr2R 12279039 intergenic Cam + chr2R 12279116 intergenic Cam + chr2R 12279192 intergenic Cam + chr2R_7_12275001 chr2R_12275001 RAL-492 897 chr2R 12334867 12334895 chr2R 12334965 12334975 6 94 0.0 1.0 0.5 4.0 108 chr2R 12334867 intergenic CG8490 + chr2R 12334921 intergenic CG8490 + chr2R 12334975 intergenic CG8490 + chr2R_6_12330001 chr2R_12330001 RAL-492 898 chr2R 12363362 12363406 chr2R 12363814 12363857 16 449 7.5 0.5 4.0 3.2 495 chr2R 12363362 intergenic CG30043 + chr2R 12363610 intergenic CG30043 + chr2R 12363857 intergenic not near genes chr2R_16_12360001 chr2R_12360001 RAL-492 899 chr2R 12481154 12481159 chr2R 12482952 12482983 roo 5 1808 6.0 3.5 4.8 0.9 1829 chr2R 12481154 exon Dh44-R2 + chr2R 12482068 intron Dh44-R2 + chr2R 12482983 intron Dh44-R2 + chr2R_5_12480001 chr2R_12480001 RAL-492 900 chr2R 12501710 12501724 chr2R 12503877 12503901 Rt1c 5 2176 1.5 14.5 8.0 0.6 2191 chr2R 12501710 intron fdl - chr2R 12502806 intron fdl - chr2R 12503901 intron fdl - chr2R_5_12500001 chr2R_12500001 RAL-492 901 chr2R 12663317 12663376 chr2R 12663417 12663476 21 93 6.5 1.0 3.8 4.4 159 chr2R 12663317 intron nemy - chr2R 12663396 intron nemy - chr2R 12663476 intron nemy - chr2R_21_12660001 chr2R_12660001 RAL-492 902 chr2R 12677380 12677406 chr2R 12677484 12677489 4 99 0.0 5.0 2.5 1.1 109 chr2R 12677380 intron CG42708 - chr2R 12677434 intron CG42708 - chr2R 12677489 intron CG42708 - chr2R_4_12675001 chr2R_12675001 RAL-492 903 chr2R 12707511 12707543 chr2R 12715897 12715929 roo 4 8386 0.5 4.0 2.2 1.2 8418 chr2R 12707511 intron CG42663 + chr2R 12711720 intron CG42663 + chr2R 12715929 intron CG42663 + chr2R_4_12710001 chr2R_12710001 RAL-492 904 chr2R 12728852 12728905 chr2R 12728975 12729022 7 120 0.0 1.0 0.5 4.7 170 chr2R 12728852 intron CG42663 + chr2R 12728937 intron CG42663 + chr2R 12729022 intron CG42663 + chr2R_7_12725001 chr2R_12725001 RAL-492 905 chr2R 12789276 12789325 chr2R 12797659 12797668 roo 8 8373 2.0 2.5 2.2 2.5 8392 chr2R 12789276 intron,3` UTR sca +,CR45137 - chr2R 12793472 intron,intron sca +,CR45137 - chr2R 12797668 intron,3` UTR sca +,CR45137 - chr2R_8_12790001 chr2R_12790001 RAL-492 906 chr2R 12819432 12819468 chr2R 12824519 12824557 jockey 7 5089 5.0 3.5 4.2 1.3 5125 chr2R 12819432 intergenic not near genes chr2R 12821994 intergenic not near genes chr2R 12824557 intergenic not near genes chr2R_7_12820001 chr2R_12820001 RAL-492 907 chr2R 13089733 13089778 chr2R 13089861 13089904 8 119 1.5 4.0 2.8 2.1 171 chr2R 13089733 intergenic not near genes chr2R 13089818 intergenic not near genes chr2R 13089904 intergenic not near genes chr2R_8_13085001 chr2R_13085001 RAL-492 908 chr2R 13107850 13107854 chr2R 13107959 13107961 4 108 6.5 0.0 3.2 1.0 111 chr2R 13107850 intergenic not near genes chr2R 13107906 intergenic not near genes chr2R 13107961 intergenic not near genes chr2R_4_13105001 chr2R_13105001 RAL-492 909 chr2R 13136828 13136851 chr2R 13141646 13141667 Doc 9 4816 5.5 5.5 5.5 1.4 4839 chr2R 13136828 exon Cap-G + chr2R 13139248 intron Cap-G + chr2R 13141667 intron Cap-G + chr2R_9_13135001 chr2R_13135001 RAL-492 910 chr2R 13136856 13136865 chr2R 13141641 13141668 Doc 6 4808 3.5 5.0 4.2 1.2 4812 chr2R 13136856 exon Cap-G + chr2R 13139262 intron Cap-G + chr2R 13141668 intron Cap-G + chr2R_6_13135001 chr2R_13135001 RAL-492 911 chr2R 13167412 13167432 chr2R 13167526 13167546 5 114 7.0 0.0 3.5 1.1 134 chr2R 13167412 intron GLaz - chr2R 13167479 intron GLaz - chr2R 13167546 intron GLaz - chr2R_5_13165001 chr2R_13165001 RAL-492 912 chr2R 13220518 13220549 chr2R 13220616 13220655 9 115 0.0 1.5 0.8 5.0 137 chr2R 13220518 intron CG17059 + chr2R 13220586 intron CG17059 + chr2R 13220655 intron CG17059 + chr2R_9_13220001 chr2R_13220001 RAL-492 913 chr2R 13309657 13309671 chr2R 13309795 13309806 8 136 4.0 2.5 3.2 1.9 149 chr2R 13309657 intergenic not near genes chr2R 13309732 intergenic not near genes chr2R 13309806 intergenic not near genes chr2R_8_13305001 chr2R_13305001 RAL-492 914 chr2R 13309672 13309682 chr2R 13309787 13309820 4 132 2.5 2.5 2.5 1.1 148 chr2R 13309672 intergenic not near genes chr2R 13309746 intergenic not near genes chr2R 13309820 intergenic not near genes chr2R_4_13305001 chr2R_13305001 RAL-492 915 chr2R 13431468 13431503 chr2R 13431567 13431602 7 99 5.5 0.0 2.8 1.8 134 chr2R 13431468 intron CG42321 - chr2R 13431535 intron CG42321 - chr2R 13431602 intron CG42321 - chr2R_7_13430001 chr2R_13430001 RAL-492 916 chr2R 13436655 13436664 chr2R 13436748 13436758 8 98 1.0 2.0 1.5 3.2 103 chr2R 13436655 intron CG42321 - chr2R 13436706 intron CG42321 - chr2R 13436758 intron CG42321 - chr2R_8_13435001 chr2R_13435001 RAL-492 917 chr2R 13439100 13439134 chr2R 13439223 13439266 4 131 4.5 2.0 3.2 1.0 166 chr2R 13439100 intergenic CG42321 -,cnn - chr2R 13439183 intergenic cnn -,CG42321 - chr2R 13439266 intergenic cnn -,CG42321 - chr2R_4_13435001 chr2R_13435001 RAL-492 918 chr2R 13547061 13547087 chr2R 13547276 13547302 7 215 5.5 2.5 4.0 1.4 241 chr2R 13547061 intron CG6145 - chr2R 13547182 intron CG6145 - chr2R 13547302 intron CG6145 - chr2R_7_13545001 chr2R_13545001 RAL-492 919 chr2R 13566239 13566277 chr2R 13566339 13566377 10 100 4.0 0.0 2.0 3.3 138 chr2R 13566239 intergenic not near genes chr2R 13566308 intergenic not near genes chr2R 13566377 intergenic not near genes chr2R_10_13565001 chr2R_13565001 RAL-492 920 chr2R 13580493 13580514 chr2R 13580861 13580884 jockey 5 369 0.0 8.5 4.2 1.0 391 chr2R 13580493 3` UTR CG6191 - chr2R 13580688 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580884 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_5_13580001 chr2R_13580001 RAL-492 921 chr2R 13608262 13608299 chr2R 13608366 13608403 8 94 2.5 3.5 3.0 2.0 141 chr2R 13608262 intergenic CG12464 - chr2R 13608332 intergenic CG12464 - chr2R 13608403 intergenic CG12464 - chr2R_8_13605001 chr2R_13605001 RAL-492 922 chr2R 13644881 13644922 chr2R 13645264 13645306 5 377 2.0 6.0 4.0 1.0 425 chr2R 13644881 intron fas + chr2R 13645094 intron fas + chr2R 13645306 intron fas + chr2R_5_13645001 chr2R_13645001 RAL-492 923 chr2R 13652695 13652739 chr2R 13652788 13652836 7 87 3.0 2.0 2.5 2.0 141 chr2R 13652695 intron fas + chr2R 13652766 intron fas + chr2R 13652836 intron fas + chr2R_7_13650001 chr2R_13650001 RAL-492 924 chr2R 13684248 13684271 chr2R 13684346 13684369 6 98 3.5 3.0 3.2 1.4 121 chr2R 13684248 intron fas + chr2R 13684308 intron fas + chr2R 13684369 intron fas + chr2R_6_13680001 chr2R_13680001 RAL-492 925 chr2R 13738921 13738939 chr2R 13739044 13739062 5 123 2.5 3.5 3.0 1.2 141 chr2R 13738921 intron fas + chr2R 13738992 intron fas + chr2R 13739062 intron fas + chr2R_5_13735001 chr2R_13735001 RAL-492 926 chr2R 13768977 13769009 chr2R 13769094 13769124 13 115 5.5 6.0 5.8 1.9 147 chr2R 13768977 intergenic not near genes chr2R 13769050 intergenic not near genes chr2R 13769124 intergenic not near genes chr2R_13_13765001 chr2R_13765001 RAL-492 927 chr2R 13888744 13888794 chr2R 13888840 13888902 8 102 3.0 0.0 1.5 3.2 158 chr2R 13888744 intron shot - chr2R 13888823 intron shot - chr2R 13888902 intron shot - chr2R_8_13885001 chr2R_13885001 RAL-492 928 chr2R 13905576 13905630 chr2R 13907578 13907626 Rt1a 7 1997 0.5 2.0 1.2 3.2 2050 chr2R 13905576 intron shot - chr2R 13906601 intron shot - chr2R 13907626 intron shot - chr2R_7_13905001 chr2R_13905001 RAL-492 929 chr2R 13925830 13925872 chr2R 13926026 13926068 9 196 4.5 3.5 4.0 1.8 238 chr2R 13925830 intron shot - chr2R 13925949 intron shot - chr2R 13926068 intron shot - chr2R_9_13925001 chr2R_13925001 RAL-492 930 chr2R 13983352 13983389 chr2R 13983455 13983490 9 98 4.0 3.0 3.5 2.0 138 chr2R 13983352 intergenic Ctf4 -,CG8067 + chr2R 13983421 5` UTR CG8067 + chr2R 13983490 5` UTR CG8067 + chr2R_9_13980001 chr2R_13980001 RAL-492 931 chr2R 13993255 13993308 chr2R 13993354 13993406 7 85 6.5 3.5 5.0 1.2 151 chr2R 13993255 intron mam + chr2R 13993330 intron mam + chr2R 13993406 intron mam + chr2R_7_13990001 chr2R_13990001 RAL-492 932 chr2R 14018149 14018188 chr2R 14018252 14018292 11 104 3.0 5.5 4.2 2.1 143 chr2R 14018149 intron mam + chr2R 14018220 intron mam + chr2R 14018292 intron mam + chr2R_11_14015001 chr2R_14015001 RAL-492 933 chr2R 14029587 14029635 chr2R 14029765 14029813 16 177 4.0 8.5 6.2 2.2 226 chr2R 14029587 intron mam + chr2R 14029700 intron mam + chr2R 14029813 intron mam + chr2R_16_14025001 chr2R_14025001 RAL-492 934 chr2R 14054384 14054413 chr2R 14054478 14054512 8 98 3.5 3.5 3.5 1.8 128 chr2R 14054384 intron mam + chr2R 14054448 intron mam + chr2R 14054512 intron mam + chr2R_8_14050001 chr2R_14050001 RAL-492 935 chr2R 14141939 14141960 chr2R 14142064 14142085 4 125 6.5 2.5 4.5 0.7 146 chr2R 14141939 intergenic not near genes chr2R 14142012 intergenic not near genes chr2R 14142085 intergenic not near genes chr2R_4_14140001 chr2R_14140001 RAL-492 936 chr2R 14142428 14142474 chr2R 14142538 14142584 13 110 3.5 2.0 2.8 3.4 156 chr2R 14142428 intergenic not near genes chr2R 14142506 intergenic not near genes chr2R 14142584 intergenic not near genes chr2R_13_14140001 chr2R_14140001 RAL-492 937 chr2R 14265421 14265432 chr2R 14265517 14265527 6 94 9.0 5.0 7.0 0.8 106 chr2R 14265421 intron CG8547 - chr2R 14265474 intron CG8547 - chr2R 14265527 intron CG8547 - chr2R_6_14265001 chr2R_14265001 RAL-492 938 chr2R 14266742 14266794 chr2R 14266836 14266870 21 91 5.5 3.5 4.5 3.8 128 chr2R 14266742 intron CG8547 - chr2R 14266806 intron CG8547 - chr2R 14266870 intron CG8547 - chr2R_21_14265001 chr2R_14265001 RAL-492 939 chr2R 14294807 14294859 chr2R 14294907 14294959 20 96 5.5 6.5 6.0 2.9 152 chr2R 14294807 intron Ih + chr2R 14294883 intron Ih + chr2R 14294959 intron Ih + chr2R_20_14290001 chr2R_14290001 RAL-492 940 chr2R 14400503 14400548 chr2R 14400602 14400647 10 97 1.5 5.5 3.5 2.2 144 chr2R 14400503 intergenic not near genes chr2R 14400575 intergenic not near genes chr2R 14400647 intergenic not near genes chr2R_10_14400001 chr2R_14400001 RAL-492 941 chr2R 14444110 14444161 chr2R 14444214 14444223 5 91 7.5 5.0 6.2 0.7 113 chr2R 14444110 intron Oaz + chr2R 14444166 intron Oaz + chr2R 14444223 intron Oaz + chr2R_5_14440001 chr2R_14440001 RAL-492 942 chr2R 14467285 14467326 chr2R 14476443 14476498 roo 13 9166 1.5 5.5 3.5 2.9 9213 chr2R 14467285 intergenic not near genes chr2R 14471892 intergenic not near genes chr2R 14476498 5` UTR CR44462 + chr2R_13_14470001 chr2R_14470001 RAL-492 943 chr2R 14497382 14497414 chr2R 14498568 14498598 1360 6 1185 2.5 4.0 3.2 1.4 1216 chr2R 14497382 3` UTR Cpsf160 - chr2R 14497990 intron Cpsf160 - chr2R 14498598 3` UTR Cpsf160 - chr2R_6_14495001 chr2R_14495001 RAL-492 944 chr2R 14565552 14565588 chr2R 14565649 14565686 8 97 6.0 4.5 5.2 1.3 134 chr2R 14565552 intron ttv + chr2R 14565619 intron ttv + chr2R 14565686 intron ttv + chr2R_8_14565001 chr2R_14565001 RAL-492 945 chr2R 14766724 14766771 chr2R 14766828 14766875 6 104 1.5 1.5 1.5 2.4 151 chr2R 14766724 intron Spred - chr2R 14766800 intron Spred - chr2R 14766875 intron Spred - chr2R_6_14765001 chr2R_14765001 RAL-492 946 chr2R 14786014 14786053 chr2R 14786126 14786166 8 113 0.0 2.5 1.2 3.6 152 chr2R 14786014 intron kn - chr2R 14786090 intron kn - chr2R 14786166 intron kn - chr2R_8_14785001 chr2R_14785001 RAL-492 947 chr2R 14799867 14799897 chr2R 14799963 14799989 5 95 1.5 9.5 5.5 0.8 122 chr2R 14799867 intron kn - chr2R 14799928 intron kn - chr2R 14799989 intron kn - chr2R_5_14795001 chr2R_14795001 RAL-492 948 chr2R 14816095 14816137 chr2R 14816201 14816219 7 101 4.0 5.5 4.8 1.2 124 chr2R 14816095 intergenic not near genes chr2R 14816157 intergenic not near genes chr2R 14816219 intergenic not near genes chr2R_7_14815001 chr2R_14815001 RAL-492 949 chr2R 14855014 14855018 chr2R 14855126 14855130 4 112 6.5 0.0 3.2 1.0 116 chr2R 14855014 5` UTR Ciao1 - chr2R 14855072 intergenic Ciao1 -,HPS1 + chr2R 14855130 intergenic Ciao1 -,HPS1 + chr2R_4_14855001 chr2R_14855001 RAL-492 950 chr2R 14855020 14855052 chr2R 14855121 14855155 4 105 4.0 0.0 2.0 1.3 135 chr2R 14855020 5` UTR Ciao1 - chr2R 14855088 intergenic Ciao1 -,HPS1 + chr2R 14855155 intergenic Ciao1 -,HPS1 + chr2R_4_14855001 chr2R_14855001 RAL-492 951 chr2R 14889194 14889223 chr2R 14897822 14897833 Max-element 10 8626 9.0 0.0 4.5 1.8 8639 chr2R 14889194 intergenic Cyp6a8 - chr2R 14893514 intergenic not near genes chr2R 14897833 intergenic not near genes chr2R_10_14890001 chr2R_14890001 RAL-492 952 chr2R 14906470 14906513 chr2R 14906598 14906642 6 125 3.5 3.0 3.2 1.4 172 chr2R 14906470 intron CG10249 - chr2R 14906556 intron CG10249 - chr2R 14906642 intron CG10249 - chr2R_6_14905001 chr2R_14905001 RAL-492 953 chr2R 14911683 14911713 chr2R 14911823 14911856 9 142 5.5 3.5 4.5 1.6 173 chr2R 14911683 intron CG10249 - chr2R 14911770 intron CG10249 - chr2R 14911856 intron CG10249 - chr2R_9_14910001 chr2R_14910001 RAL-492 954 chr2R 14922128 14922169 chr2R 14922222 14922264 12 90 6.0 6.5 6.2 1.7 136 chr2R 14922128 intron CG10249 - chr2R 14922196 intron CG10249 - chr2R 14922264 intron CG10249 - chr2R_12_14920001 chr2R_14920001 RAL-492 955 chr2R 14998499 14998512 chr2R 14998659 14998672 6 160 3.0 3.0 3.0 1.5 173 chr2R 14998499 intergenic not near genes chr2R 14998586 intergenic not near genes chr2R 14998672 intergenic not near genes chr2R_6_14995001 chr2R_14995001 RAL-492 956 chr2R 15004723 15004753 chr2R 15005072 15005099 jockey 10 348 2.5 6.0 4.2 1.9 376 chr2R 15004723 intergenic not near genes chr2R 15004911 intergenic not near genes chr2R 15005099 intergenic not near genes chr2R_10_15000001 chr2R_15000001 RAL-492 957 chr2R 15015441 15015490 chr2R 15022882 15022934 mdg1 12 7441 4.0 4.0 4.0 2.4 7493 chr2R 15015441 intron hbs + chr2R 15019188 intron hbs + chr2R 15022934 intron hbs + chr2R_12_15015001 chr2R_15015001 RAL-492 958 chr2R 15065618 15065641 chr2R 15065700 15065739 4 87 2.0 3.0 2.5 1.1 121 chr2R 15065618 intergenic not near genes chr2R 15065678 intergenic not near genes chr2R 15065739 intergenic not near genes chr2R_4_15065001 chr2R_15065001 RAL-492 959 chr2R 15084969 15085002 chr2R 15092027 15092071 297 8 7068 4.5 4.0 4.2 1.5 7102 chr2R 15084969 intergenic not near genes chr2R 15088520 intergenic not near genes chr2R 15092071 5` UTR CR44457 + chr2R_8_15085001 chr2R_15085001 RAL-492 960 chr2R 15119299 15119351 chr2R 15127800 15127837 Tirant 5 8494 6.0 2.5 4.2 1.0 8538 chr2R 15119299 intron chn + chr2R 15123568 intron chn + chr2R 15127837 intron chn + chr2R_5_15120001 chr2R_15120001 RAL-492 961 chr2R 15133464 15133506 chr2R 15133563 15133605 14 98 8.5 7.5 8.0 1.6 141 chr2R 15133464 intron chn + chr2R 15133534 intron chn + chr2R 15133605 intron chn + chr2R_14_15130001 chr2R_15130001 RAL-492 962 chr2R 15137950 15137996 chr2R 15138050 15138087 10 97 3.0 0.0 1.5 4.0 137 chr2R 15137950 intron chn + chr2R 15138018 intron chn + chr2R 15138087 intron chn + chr2R_10_15135001 chr2R_15135001 RAL-492 963 chr2R 15187746 15187783 chr2R 15187838 15187880 16 95 2.0 3.5 2.8 4.2 134 chr2R 15187746 intron igl + chr2R 15187813 intron igl + chr2R 15187880 intron igl + chr2R_16_15185001 chr2R_15185001 RAL-492 964 chr2R 15196079 15196127 chr2R 15196190 15196198 17 111 6.0 3.5 4.8 2.9 119 chr2R 15196079 intergenic not near genes chr2R 15196138 intergenic not near genes chr2R 15196198 intergenic not near genes chr2R_17_15195001 chr2R_15195001 RAL-492 965 chr2R 15230363 15230369 chr2R 15230670 15230676 5 307 15.0 0.0 7.5 0.6 313 chr2R 15230363 intron,5` UTR Fs -,CR44370 + chr2R 15230520 intron,5` UTR Fs -,CR44370 + chr2R 15230676 intron,5` UTR Fs -,CR44370 + chr2R_5_15230001 chr2R_15230001 RAL-492 966 chr2R 15294655 15294708 chr2R 15294756 15294810 16 97 5.5 4.0 4.8 2.8 155 chr2R 15294655 intron,3` UTR Trpm -,CR44241 - chr2R 15294732 intron,3` UTR Trpm -,CR44241 - chr2R 15294810 intron,3` UTR Trpm -,CR44241 - chr2R_16_15290001 chr2R_15290001 RAL-492 967 chr2R 15296141 15296172 chr2R 15296243 15296274 8 100 5.0 5.0 5.0 1.3 133 chr2R 15296141 intron Trpm - chr2R 15296208 intron Trpm - chr2R 15296274 intron Trpm - chr2R_8_15295001 chr2R_15295001 RAL-492 968 chr2R 15336274 15336312 chr2R 15336372 15336409 8 89 5.0 9.0 7.0 1.0 135 chr2R 15336274 intron Hr51 + chr2R 15336342 intron Hr51 + chr2R 15336409 intron Hr51 + chr2R_8_15335001 chr2R_15335001 RAL-492 969 chr2R 15375056 15375079 chr2R 15375186 15375198 11 127 3.5 1.0 2.2 3.4 142 chr2R 15375056 intergenic not near genes chr2R 15375127 intergenic not near genes chr2R 15375198 intergenic not near genes chr2R_11_15375001 chr2R_15375001 RAL-492 970 chr2R 15537692 15537729 chr2R 15537794 15537831 6 102 2.5 0.5 1.5 2.4 139 chr2R 15537692 3` UTR CG30471 + chr2R 15537762 3` UTR CG30471 + chr2R 15537831 intergenic CG30471 +,CG30467 + chr2R_6_15535001 chr2R_15535001 RAL-492 971 chr2R 15606112 15606129 chr2R 15606209 15606226 4 96 5.5 2.0 3.8 0.8 114 chr2R 15606112 intergenic not near genes chr2R 15606169 intergenic not near genes chr2R 15606226 intergenic not near genes chr2R_4_15605001 chr2R_15605001 RAL-492 972 chr2R 15767212 15767253 chr2R 15767328 15767333 15 104 1.0 5.0 3.0 3.8 121 chr2R 15767212 intron Zasp52 - chr2R 15767272 intron Zasp52 - chr2R 15767333 intron Zasp52 - chr2R_15_15765001 chr2R_15765001 RAL-492 973 chr2R 15833508 15833553 chr2R 15833613 15833632 10 93 2.5 5.0 3.8 2.1 124 chr2R 15833508 intron,intron tun +,Poxn - chr2R 15833570 intron,intron tun +,Poxn - chr2R 15833632 intron,intron tun +,Poxn - chr2R_10_15830001 chr2R_15830001 RAL-492 974 chr2R 15845133 15845182 chr2R 15845229 15845281 5 89 0.0 3.0 1.5 2.0 148 chr2R 15845133 intron,intron tun +,CG8249 - chr2R 15845207 intron,intron tun +,CG8249 - chr2R 15845281 intron,intron tun +,CG8249 - chr2R_5_15845001 chr2R_15845001 RAL-492 975 chr2R 15877938 15877980 chr2R 15878044 15878093 4 111 4.0 0.0 2.0 1.3 155 chr2R 15877938 intron sli - chr2R 15878016 intron sli - chr2R 15878093 intron sli - chr2R_4_15875001 chr2R_15875001 RAL-492 976 chr2R 16106623 16106676 chr2R 16106856 16106895 14 224 29.5 26.0 27.8 0.5 272 chr2R 16106623 3` UTR Rho1 + chr2R 16106759 3` UTR Rho1 + chr2R 16106895 3` UTR Rho1 + chr2R_14_16105001 chr2R_16105001 RAL-492 977 chr2R 16224878 16224919 chr2R 16224979 16225011 12 98 4.5 7.0 5.8 1.8 133 chr2R 16224878 exon CG15706 - chr2R 16224944 intron CG15706 - chr2R 16225011 intron CG15706 - chr2R_12_16220001 chr2R_16220001 RAL-492 978 chr2R 16245611 16245657 chr2R 16245719 16245753 7 106 3.5 3.5 3.5 1.6 142 chr2R 16245611 intron CngA - chr2R 16245682 intron CngA - chr2R 16245753 intron CngA - chr2R_7_16245001 chr2R_16245001 RAL-492 979 chr2R 16279397 16279410 chr2R 16279499 16279514 4 104 0.0 6.5 3.2 1.0 117 chr2R 16279397 intergenic not near genes chr2R 16279456 intergenic not near genes chr2R 16279514 intergenic CG15704 + chr2R_4_16275001 chr2R_16275001 RAL-492 980 chr2R 16351969 16352004 chr2R 16352834 16352867 8 862 2.0 1.5 1.8 2.9 898 chr2R 16351969 intergenic not near genes chr2R 16352418 intergenic not near genes chr2R 16352867 intergenic not near genes chr2R_8_16350001 chr2R_16350001 RAL-492 981 chr2R 16357852 16357882 chr2R 16357928 16357959 7 80 6.0 3.0 4.5 1.3 107 chr2R 16357852 5` UTR CR43416 + chr2R 16357906 5` UTR CR43416 + chr2R 16357959 5` UTR CR43416 + chr2R_7_16355001 chr2R_16355001 RAL-492 982 chr2R 16460477 16460766 chr2R 16460575 16460868 5 101 2.5 1.5 2.0 1.7 391 chr2R 16460477 intergenic not near genes chr2R 16460672 intergenic not near genes chr2R 16460868 intergenic not near genes chr2R_5_16460001 chr2R_16460001 RAL-492 983 chr2R 16486851 16486880 chr2R 16486966 16486995 4 115 6.0 3.5 4.8 0.7 144 chr2R 16486851 exon CG33458 + chr2R 16486923 intron CG33458 + chr2R 16486995 intron CG33458 + chr2R_4_16485001 chr2R_16485001 RAL-492 984 chr2R 16489254 16489273 chr2R 16489358 16489377 5 104 8.0 6.0 7.0 0.6 123 chr2R 16489254 intergenic CG33459 + chr2R 16489316 intergenic CG33459 + chr2R 16489377 intergenic CG33459 + chr2R_5_16485001 chr2R_16485001 RAL-492 985 chr2R 16489275 16489298 chr2R 16489350 16489385 6 96 4.0 3.5 3.8 1.2 110 chr2R 16489275 intergenic CG33459 + chr2R 16489330 intergenic CG33459 + chr2R 16489385 intergenic CG33459 + chr2R_6_16485001 chr2R_16485001 RAL-492 986 chr2R 16520567 16520603 chr2R 16520732 16520774 9 170 4.0 5.5 4.8 1.6 207 chr2R 16520567 intron Sema-2a + chr2R 16520670 intron Sema-2a + chr2R 16520774 intron Sema-2a + chr2R_9_16520001 chr2R_16520001 RAL-492 987 chr2R 16539620 16539670 chr2R 16544849 16544899 copia 9 5229 2.5 2.0 2.2 2.8 5279 chr2R 16539620 intergenic not near genes chr2R 16542260 intergenic not near genes chr2R 16544899 intergenic not near genes chr2R_9_16540001 chr2R_16540001 RAL-492 988 chr2R 16618702 16618745 chr2R 16618798 16618841 6 95 0.0 7.0 3.5 1.3 139 chr2R 16618702 intron CG5065 + chr2R 16618772 intron CG5065 + chr2R 16618841 5` UTR CG5065 + chr2R_6_16615001 chr2R_16615001 RAL-492 989 chr2R 16775625 16775672 chr2R 16775909 16775951 14 280 4.5 3.0 3.8 2.9 326 chr2R 16775625 3` UTR Arp53D + chr2R 16775788 intergenic Arp53D + chr2R 16775951 intergenic Arp53D + chr2R_14_16775001 chr2R_16775001 RAL-492 990 chr2R 16784441 16784484 chr2R 16784537 16784592 16 106 3.0 4.5 3.8 3.3 151 chr2R 16784441 intron CG5522 + chr2R 16784516 intron CG5522 + chr2R 16784592 intron CG5522 + chr2R_16_16780001 chr2R_16780001 RAL-492 991 chr2R 16833810 16833836 chr2R 16833915 16833923 5 100 6.5 6.5 6.5 0.7 113 chr2R 16833810 5` UTR CR43650 + chr2R 16833866 5` UTR CR43650 + chr2R 16833923 5` UTR CR43650 + chr2R_5_16830001 chr2R_16830001 RAL-492 992 chr2R 16880021 16880065 chr2R 16880118 16880162 5 97 1.5 0.5 1.0 2.5 141 chr2R 16880021 intron CG8910 - chr2R 16880092 intron CG8910 - chr2R 16880162 intron CG8910 - chr2R_5_16880001 chr2R_16880001 RAL-492 993 chr2R 16972421 16972456 chr2R 16972537 16972566 10 116 0.5 8.0 4.2 1.9 145 chr2R 16972421 intergenic not near genes chr2R 16972494 intergenic not near genes chr2R 16972566 intergenic not near genes chr2R_10_16970001 chr2R_16970001 RAL-492 994 chr2R 16975187 16975220 chr2R 16975284 16975317 10 97 1.0 2.0 1.5 4.0 130 chr2R 16975187 intron Cbp53E + chr2R 16975252 intron Cbp53E + chr2R 16975317 intron Cbp53E + chr2R_10_16975001 chr2R_16975001 RAL-492 995 chr2R 16987026 16987071 chr2R 16987165 16987212 10 140 3.0 3.0 3.0 2.5 186 chr2R 16987026 intron Cbp53E + chr2R 16987119 intron Cbp53E + chr2R 16987212 intron Cbp53E + chr2R_10_16985001 chr2R_16985001 RAL-492 996 chr2R 16989146 16989176 chr2R 16989241 16989273 7 96 2.5 7.5 5.0 1.2 127 chr2R 16989146 intron Cbp53E + chr2R 16989210 intron Cbp53E + chr2R 16989273 intron Cbp53E + chr2R_7_16985001 chr2R_16985001 RAL-492 997 chr2R 17079034 17079087 chr2R 17079136 17079188 4 102 4.5 2.0 3.2 1.0 154 chr2R 17079034 intron CG30460 - chr2R 17079111 intron CG30460 - chr2R 17079188 intron CG30460 - chr2R_4_17075001 chr2R_17075001 RAL-492 998 chr2R 17120265 17120316 chr2R 17120383 17120392 13 111 2.5 1.0 1.8 4.6 127 chr2R 17120265 exon Amy-p - chr2R 17120328 intergenic Amy-p - chr2R 17120392 intergenic Amy-p - chr2R_13_17120001 chr2R_17120001 RAL-492 999 chr2R 17139394 17139402 chr2R 17139550 17139562 5 159 5.0 8.5 6.8 0.6 168 chr2R 17139394 3` UTR CG11395 + chr2R 17139478 3` UTR,3` UTR CG11395 +,CG43103 - chr2R 17139562 3` UTR,3` UTR CG11395 +,CG43103 - chr2R_5_17135001 chr2R_17135001 RAL-492 1000 chr2R 17147232 17147262 chr2R 17152283 17152313 jockey 15 5049 3.0 5.0 4.0 3.0 5081 chr2R 17147232 intergenic not near genes chr2R 17149772 intergenic not near genes chr2R 17152313 intergenic not near genes chr2R_15_17145001 chr2R_17145001 RAL-492 1001 chr2R 17161335 17161355 chr2R 17161562 17161565 6 222 7.0 0.0 3.5 1.3 230 chr2R 17161335 intergenic not near genes chr2R 17161450 intergenic not near genes chr2R 17161565 intergenic not near genes chr2R_6_17160001 chr2R_17160001 RAL-492 1002 chr2R 17176352 17176384 chr2R 17182562 17182594 diver 14 6210 0.0 5.5 2.8 3.7 6242 chr2R 17176352 intergenic not near genes chr2R 17179473 intergenic not near genes chr2R 17182594 intergenic not near genes chr2R_14_17175001 chr2R_17175001 RAL-492 1003 chr2R 17188717 17188736 chr2R 17188824 17188844 4 108 4.0 4.5 4.2 0.8 127 chr2R 17188717 intergenic CR44389 - chr2R 17188780 intergenic CR44389 - chr2R 17188844 3` UTR CR44389 - chr2R_4_17185001 chr2R_17185001 RAL-492 1004 chr2R 17210062 17210102 chr2R 17210163 17210202 6 98 2.5 2.0 2.2 1.9 140 chr2R 17210062 intergenic not near genes chr2R 17210132 intergenic not near genes chr2R 17210202 intergenic not near genes chr2R_6_17210001 chr2R_17210001 RAL-492 1005 chr2R 17236488 17236532 chr2R 17241711 17241740 copia 13 5223 6.0 6.5 6.2 1.8 5252 chr2R 17236488 intron mbl + chr2R 17239114 intron mbl + chr2R 17241740 intron mbl + chr2R_13_17235001 chr2R_17235001 RAL-492 1006 chr2R 17409665 17409706 chr2R 17409763 17409804 9 93 0.0 5.0 2.5 2.6 139 chr2R 17409665 intron CG30101 - chr2R 17409734 intron CG30101 - chr2R 17409804 exon CG30101 - chr2R_9_17405001 chr2R_17405001 RAL-492 1007 chr2R 17438002 17438049 chr2R 17438099 17438103 9 92 4.5 4.0 4.2 1.7 101 chr2R 17438002 intron EDTP - chr2R 17438052 intron EDTP - chr2R 17438103 intron EDTP - chr2R_9_17435001 chr2R_17435001 RAL-492 1008 chr2R 17443765 17443796 chr2R 17443861 17443891 7 96 2.5 2.5 2.5 2.0 126 chr2R 17443765 intron EDTP - chr2R 17443828 intron EDTP - chr2R 17443891 intron EDTP - chr2R_7_17440001 chr2R_17440001 RAL-492 1009 chr2R 17470322 17470353 chr2R 17470421 17470452 5 100 2.0 3.0 2.5 1.4 130 chr2R 17470322 intron qkr54B + chr2R 17470387 intron qkr54B + chr2R 17470452 intron qkr54B + chr2R_5_17470001 chr2R_17470001 RAL-492 1010 chr2R 17485899 17485953 chr2R 17490680 17490733 F-element 14 4780 1.0 0.0 0.5 9.3 4834 chr2R 17485899 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488316 intron NT5E-2 + chr2R 17490733 intron NT5E-2 + chr2R_14_17485001 chr2R_17485001 RAL-492 1011 chr2R 17709967 17710113 chr2R 17710078 17710211 10 99 0.0 0.0 0.0 10.0 244 chr2R 17709967 intron CG6424 - chr2R 17710089 intron CG6424 - chr2R 17710211 intron CG6424 - chr2R_10_17710001 chr2R_17710001 RAL-492 1012 chr2R 17720900 17720940 chr2R 17721003 17721043 7 101 2.5 3.0 2.8 1.8 143 chr2R 17720900 intergenic not near genes chr2R 17720972 intergenic not near genes chr2R 17721043 intergenic not near genes chr2R_7_17720001 chr2R_17720001 RAL-492 1013 chr2R 17730640 17730670 chr2R 17730738 17730768 5 97 2.5 1.0 1.8 1.8 128 chr2R 17730640 intron,intron CG4975 +,CG4984 + chr2R 17730704 intron,intron CG4975 +,CG4984 + chr2R 17730768 intron,intron CG4975 +,CG4984 + chr2R_5_17730001 chr2R_17730001 RAL-492 1014 chr2R 17784006 17784056 chr2R 17784267 17784309 pogo 20 258 7.5 6.5 7.0 2.5 303 chr2R 17784006 intergenic mir-31a - chr2R 17784158 intergenic mir-31a - chr2R 17784309 intergenic mir-31a - chr2R_20_17780001 chr2R_17780001 RAL-492 1015 chr2R 17886629 17886656 chr2R 17886728 17886748 6 99 5.0 5.5 5.2 1.0 119 chr2R 17886629 intron Elk + chr2R 17886688 intron Elk + chr2R 17886748 intron Elk + chr2R_6_17885001 chr2R_17885001 RAL-492 1016 chr2R 17920122 17920281 chr2R 17920221 17920503 13 127 7.0 5.0 6.0 1.9 381 chr2R 17920122 intron Elk + chr2R 17920312 intron Elk + chr2R 17920503 intron Elk + chr2R_13_17920001 chr2R_17920001 RAL-492 1017 chr2R 17929114 17929128 chr2R 17929225 17929236 4 111 6.0 6.5 6.2 0.6 122 chr2R 17929114 intergenic not near genes chr2R 17929175 intergenic not near genes chr2R 17929236 intergenic not near genes chr2R_4_17925001 chr2R_17925001 RAL-492 1018 chr2R 18045651 18045701 chr2R 18046023 18046073 jockey 8 372 1.5 1.5 1.5 3.2 422 chr2R 18045651 intergenic not near genes chr2R 18045862 intergenic not near genes chr2R 18046073 intergenic CG5767 - chr2R_8_18045001 chr2R_18045001 RAL-492 1019 chr2R 18074597 18074622 chr2R 18074693 18074716 5 95 3.0 2.5 2.8 1.3 119 chr2R 18074597 intron CG34386 + chr2R 18074656 intron CG34386 + chr2R 18074716 intron CG34386 + chr2R_5_18070001 chr2R_18070001 RAL-492 1020 chr2R 18111673 18111708 chr2R 18115557 18115596 F-element 5 3882 6.0 5.5 5.8 0.7 3923 chr2R 18111673 intergenic not near genes chr2R 18113634 intergenic not near genes chr2R 18115596 intergenic not near genes chr2R_5_18110001 chr2R_18110001 RAL-492 1021 chr2R 18124327 18124342 chr2R 18124424 18124439 4 96 6.5 5.5 6.0 0.6 112 chr2R 18124327 intron stau - chr2R 18124383 intron stau - chr2R 18124439 intron stau - chr2R_4_18120001 chr2R_18120001 RAL-492 1022 chr2R 18124344 18124371 chr2R 18124418 18124465 11 91 4.0 5.0 4.5 2.0 121 chr2R 18124344 intron stau - chr2R 18124404 intron stau - chr2R 18124465 intron stau - chr2R_11_18120001 chr2R_18120001 RAL-492 1023 chr2R 18185778 18185813 chr2R 18185880 18185912 15 101 7.5 5.0 6.2 2.1 134 chr2R 18185778 intron CG33958 - chr2R 18185845 intron CG33958 - chr2R 18185912 intron CG33958 - chr2R_15_18185001 chr2R_18185001 RAL-492 1024 chr2R 18197054 18197096 chr2R 18197152 18197194 10 98 1.0 2.5 1.8 3.6 140 chr2R 18197054 intergenic not near genes chr2R 18197124 intergenic not near genes chr2R 18197194 intergenic not near genes chr2R_10_18195001 chr2R_18195001 RAL-492 1025 chr2R 18358387 18358389 chr2R 18372607 18372617 roo 4 14228 11.5 7.0 9.2 0.4 14230 chr2R 18358387 intergenic not near genes chr2R 18365502 intergenic not near genes chr2R 18372617 intergenic not near genes chr2R_4_18365001 chr2R_18365001 RAL-492 1026 chr2R 18398142 18398193 chr2R 18398257 18398307 8 114 1.5 2.5 2.0 2.7 165 chr2R 18398142 intron GstE10 - chr2R 18398224 intron GstE10 - chr2R 18398307 intron GstE10 - chr2R_8_18395001 chr2R_18395001 RAL-492 1027 chr2R 18402479 18402528 chr2R 18402587 18402636 15 105 4.0 5.0 4.5 2.7 157 chr2R 18402479 intergenic not near genes chr2R 18402558 intergenic not near genes chr2R 18402636 intergenic not near genes chr2R_15_18400001 chr2R_18400001 RAL-492 1028 chr2R 18405758 18405780 chr2R 18405852 18405881 4 99 0.0 4.5 2.2 1.2 123 chr2R 18405758 intergenic GstE6 +,GstE5 + chr2R 18405820 intergenic GstE6 +,GstE5 + chr2R 18405881 intergenic GstE6 + chr2R_4_18405001 chr2R_18405001 RAL-492 1029 chr2R 18407227 18407259 chr2R 18407313 18407355 10 91 3.5 11.0 7.2 1.2 128 chr2R 18407227 exon GstE7 + chr2R 18407291 exon GstE7 + chr2R 18407355 exon GstE7 + chr2R_10_18405001 chr2R_18405001 RAL-492 1030 chr2R 18438029 18438075 chr2R 18438163 18438176 11 115 6.0 5.0 5.5 1.7 147 chr2R 18438029 intron CG30118 - chr2R 18438102 intron CG30118 - chr2R 18438176 intron CG30118 - chr2R_11_18435001 chr2R_18435001 RAL-492 1031 chr2R 18446133 18446182 chr2R 18446402 18446453 7 270 3.5 2.5 3.0 1.8 320 chr2R 18446133 intergenic CG30120 +,CG5189 + chr2R 18446293 intergenic CG30120 +,CG5189 + chr2R 18446453 intergenic CG30120 +,CG5189 + chr2R_7_18445001 chr2R_18445001 RAL-492 1032 chr2R 18471908 18471930 chr2R 18472000 18472026 4 95 2.0 0.5 1.2 1.8 118 chr2R 18471908 intron CG30116 - chr2R 18471967 intron CG30116 - chr2R 18472026 intron CG30116 - chr2R_4_18470001 chr2R_18470001 RAL-492 1033 chr2R 18484662 18484709 chr2R 18484798 18484845 14 136 4.0 6.0 5.0 2.3 183 chr2R 18484662 intron CG30116 - chr2R 18484754 intron CG30116 - chr2R 18484845 intron CG30116 - chr2R_14_18480001 chr2R_18480001 RAL-492 1034 chr2R 18486829 18486880 chr2R 18487111 18487162 18 276 7.5 5.5 6.5 2.4 333 chr2R 18486829 intron CG30116 - chr2R 18486996 intron CG30116 - chr2R 18487162 intron CG30116 - chr2R_18_18485001 chr2R_18485001 RAL-492 1035 chr2R 18487825 18487852 chr2R 18495293 18495342 blood 4 7482 0.5 3.0 1.8 1.4 7517 chr2R 18487825 intron CG30116 - chr2R 18491584 intron CG30116 - chr2R 18495342 intron CG30116 - chr2R_4_18490001 chr2R_18490001 RAL-492 1036 chr2R 18528174 18528218 chr2R 18528279 18528282 11 93 6.0 2.5 4.2 2.1 108 chr2R 18528174 intron CG10924 + chr2R 18528228 intron CG10924 + chr2R 18528282 intron CG10924 + chr2R_11_18525001 chr2R_18525001 RAL-492 1037 chr2R 18575139 18575159 chr2R 18575375 18575379 8 234 1.0 4.0 2.5 2.3 240 chr2R 18575139 intron GEFmeso - chr2R 18575259 intron GEFmeso - chr2R 18575379 intron GEFmeso - chr2R_8_18575001 chr2R_18575001 RAL-492 1038 chr2R 18575779 18575816 chr2R 18581986 18582022 3S18 11 6201 8.5 5.0 6.8 1.4 6243 chr2R 18575779 intron GEFmeso - chr2R 18578900 intron GEFmeso - chr2R 18582022 intron GEFmeso - chr2R_11_18575001 chr2R_18575001 RAL-492 1039 chr2R 18590850 18590900 chr2R 18600022 18600051 roo 14 9164 4.5 3.0 3.8 2.9 9201 chr2R 18590850 intron GEFmeso - chr2R 18595450 intron GEFmeso - chr2R 18600051 intron GEFmeso - chr2R_14_18595001 chr2R_18595001 RAL-492 1040 chr2R 18692880 18692920 chr2R 18692987 18693015 6 104 6.5 3.0 4.8 1.0 135 chr2R 18692880 intron Sik3 + chr2R 18692948 intron Sik3 + chr2R 18693015 intron Sik3 + chr2R_6_18690001 chr2R_18690001 RAL-492 1041 chr2R 18738190 18738236 chr2R 18738286 18738332 5 92 0.5 1.0 0.8 2.8 142 chr2R 18738190 intron Hs3st-A + chr2R 18738261 intron Hs3st-A + chr2R 18738332 intron Hs3st-A + chr2R_5_18735001 chr2R_18735001 RAL-492 1042 chr2R 18785896 18785948 chr2R 18785995 18786020 13 95 3.0 6.5 4.8 2.2 124 chr2R 18785896 intron CG15080 + chr2R 18785958 intron CG15080 + chr2R 18786020 intron CG15080 + chr2R_13_18785001 chr2R_18785001 RAL-492 1043 chr2R 18862289 18862409 chr2R 18862396 18862512 9 117 0.0 0.0 0.0 9.0 223 chr2R 18862289 intergenic Jheh3 - chr2R 18862400 intergenic Jheh3 -,CG43069 + chr2R 18862512 intergenic CG43069 +,Jheh3 - chr2R_9_18860001 chr2R_18860001 RAL-492 1044 chr2R 18926500 18926528 chr2R 18926605 18926632 12 106 1.5 1.0 1.2 5.5 132 chr2R 18926500 intron sano + chr2R 18926566 intron sano + chr2R 18926632 intron sano + chr2R_12_18925001 chr2R_18925001 RAL-492 1045 chr2R 18984448 18984492 chr2R 18984727 18984771 15 275 4.5 1.5 3.0 3.8 323 chr2R 18984448 intergenic not near genes chr2R 18984610 intergenic not near genes chr2R 18984771 intergenic not near genes chr2R_15_18980001 chr2R_18980001 RAL-492 1046 chr2R 19012923 19012968 chr2R 19013037 19013082 7 112 4.0 7.5 5.8 1.0 159 chr2R 19012923 intergenic not near genes chr2R 19013002 intergenic not near genes chr2R 19013082 intergenic not near genes chr2R_7_19010001 chr2R_19010001 RAL-492 1047 chr2R 19026037 19026054 chr2R 19026192 19026214 7 159 5.5 2.0 3.8 1.5 177 chr2R 19026037 intron 5-HT1B - chr2R 19026126 intron 5-HT1B - chr2R 19026214 intron 5-HT1B - chr2R_7_19025001 chr2R_19025001 RAL-492 1048 chr2R 19032787 19032835 chr2R 19032895 19032926 20 100 6.0 4.0 5.0 3.3 139 chr2R 19032787 intergenic 5-HT1B - chr2R 19032856 intergenic 5-HT1B - chr2R 19032926 intergenic 5-HT1B - chr2R_20_19030001 chr2R_19030001 RAL-492 1049 chr2R 19231214 19231259 chr2R 19231471 19231516 14 248 5.0 10.0 7.5 1.6 302 chr2R 19231214 intron cora + chr2R 19231365 intron cora + chr2R 19231516 intron cora + chr2R_14_19230001 chr2R_19230001 RAL-492 1050 chr2R 19352331 19352377 chr2R 19352428 19352476 9 98 1.5 1.5 1.5 3.6 145 chr2R 19352331 intron Rgk1 - chr2R 19352404 intron Rgk1 - chr2R 19352476 intron Rgk1 - chr2R_9_19350001 chr2R_19350001 RAL-492 1051 chr2R 19373759 19373785 chr2R 19373837 19373884 10 89 6.0 3.5 4.8 1.7 125 chr2R 19373759 intergenic CG9416 - chr2R 19373822 intergenic CG9416 - chr2R 19373884 intergenic CG9416 - chr2R_10_19370001 chr2R_19370001 RAL-492 1052 chr2R 19650136 19650185 chr2R 19650239 19650288 12 102 2.0 1.0 1.5 4.8 152 chr2R 19650136 intergenic not near genes chr2R 19650212 intergenic not near genes chr2R 19650288 intergenic not near genes chr2R_12_19650001 chr2R_19650001 RAL-492 1053 chr2R 19676660 19676712 chr2R 19676767 19676819 20 106 3.5 4.5 4.0 4.0 159 chr2R 19676660 intergenic not near genes chr2R 19676740 intergenic not near genes chr2R 19676819 intergenic not near genes chr2R_20_19675001 chr2R_19675001 RAL-492 1054 chr2R 19715839 19715856 chr2R 19723328 19723345 blood 5 7486 12.0 8.0 10.0 0.5 7506 chr2R 19715839 intergenic not near genes chr2R 19719592 intergenic not near genes chr2R 19723345 intergenic not near genes chr2R_5_19715001 chr2R_19715001 RAL-492 1055 chr2R 19773994 19774037 chr2R 19774127 19774169 6 132 2.0 3.0 2.5 1.7 175 chr2R 19773994 intergenic not near genes chr2R 19774082 intergenic not near genes chr2R 19774169 intergenic not near genes chr2R_6_19770001 chr2R_19770001 RAL-492 1056 chr2R 19776580 19776611 chr2R 19779923 19779954 jockey 9 3341 6.0 8.0 7.0 1.1 3374 chr2R 19776580 intergenic not near genes chr2R 19778267 intergenic not near genes chr2R 19779954 intergenic not near genes chr2R_9_19775001 chr2R_19775001 RAL-492 1057 chr2R 19776615 19776623 chr2R 19779920 19779966 jockey 5 3335 3.0 7.5 5.2 0.8 3351 chr2R 19776615 intergenic not near genes chr2R 19778290 intergenic not near genes chr2R 19779966 intergenic not near genes chr2R_5_19775001 chr2R_19775001 RAL-492 1058 chr2R 19816081 19816090 chr2R 19816214 19816223 4 133 0.0 0.0 0.0 4.0 142 chr2R 19816081 3` UTR Obp56h + chr2R 19816152 3` UTR Obp56h + chr2R 19816223 intergenic Obp56h + chr2R_4_19815001 chr2R_19815001 RAL-492 1059 chr2R 19837701 19837748 chr2R 19837820 19837859 8 118 1.0 5.5 3.2 1.9 158 chr2R 19837701 intergenic not near genes chr2R 19837780 intergenic not near genes chr2R 19837859 intergenic not near genes chr2R_8_19835001 chr2R_19835001 RAL-492 1060 chr2R 19914836 19914877 chr2R 19922268 19922309 mdg1 6 7432 2.5 2.0 2.2 1.9 7473 chr2R 19914836 intergenic not near genes chr2R 19918572 intergenic not near genes chr2R 19922309 intergenic not near genes chr2R_6_19915001 chr2R_19915001 RAL-492 1061 chr2R 19953729 19953766 chr2R 19953827 19953864 11 95 6.0 5.0 5.5 1.7 135 chr2R 19953729 intergenic CG44622 + chr2R 19953796 5` UTR CG44622 + chr2R 19953864 5` UTR CG44622 + chr2R_11_19950001 chr2R_19950001 RAL-492 1062 chr2R 19984449 19984492 chr2R 19985293 19985341 17 846 6.0 0.5 3.2 4.0 892 chr2R 19984449 3` UTR CG8654 + chr2R 19984895 3` UTR CG8654 + chr2R 19985341 intergenic CG8654 + chr2R_17_19980001 chr2R_19980001 RAL-492 1063 chr2R 20031888 20031921 chr2R 20032003 20032037 9 116 7.5 6.5 7.0 1.1 149 chr2R 20031888 intergenic not near genes chr2R 20031962 intergenic not near genes chr2R 20032037 intergenic not near genes chr2R_9_20030001 chr2R_20030001 RAL-492 1064 chr2R 20069234 20069255 chr2R 20071892 20071913 opus 5 2658 1.0 5.0 3.0 1.2 2679 chr2R 20069234 intergenic not near genes chr2R 20070574 intergenic not near genes chr2R 20071913 intergenic not near genes chr2R_5_20070001 chr2R_20070001 RAL-492 1065 chr2R 20080601 20080621 chr2R 20080698 20080716 5 95 0.0 6.5 3.2 1.2 115 chr2R 20080601 intergenic not near genes chr2R 20080658 intergenic not near genes chr2R 20080716 intergenic not near genes chr2R_5_20080001 chr2R_20080001 RAL-492 1066 chr2R 20118866 20118877 chr2R 20118972 20118981 7 106 2.0 3.5 2.8 1.8 115 chr2R 20118866 intergenic not near genes chr2R 20118924 intergenic not near genes chr2R 20118981 intergenic not near genes chr2R_7_20115001 chr2R_20115001 RAL-492 1067 chr2R 20118884 20118901 chr2R 20118966 20118974 8 95 1.0 3.5 2.2 2.5 90 chr2R 20118884 intergenic not near genes chr2R 20118929 intergenic not near genes chr2R 20118974 intergenic not near genes chr2R_8_20115001 chr2R_20115001 RAL-492 1068 chr2R 20352619 20352663 chr2R 20352858 20352902 14 238 5.5 2.5 4.0 2.8 283 chr2R 20352619 intergenic not near genes chr2R 20352760 intergenic not near genes chr2R 20352902 intergenic not near genes chr2R_14_20350001 chr2R_20350001 RAL-492 1069 chr2R 20395027 20395059 chr2R 20395194 20395254 7 190 7.0 0.0 3.5 1.6 227 chr2R 20395027 intergenic not near genes chr2R 20395140 intergenic not near genes chr2R 20395254 intergenic not near genes chr2R_7_20395001 chr2R_20395001 RAL-492 1070 chr2R 20408599 20408643 chr2R 20408697 20408719 12 90 5.5 2.5 4.0 2.4 120 chr2R 20408599 intergenic not near genes chr2R 20408659 intergenic not near genes chr2R 20408719 intergenic not near genes chr2R_12_20405001 chr2R_20405001 RAL-492 1071 chr2R 20434098 20434105 chr2R 20434197 20434204 4 98 0.0 3.5 1.8 1.4 106 chr2R 20434098 intron CG12484 + chr2R 20434151 intron CG12484 + chr2R 20434204 intron CG12484 + chr2R_4_20430001 chr2R_20430001 RAL-492 1072 chr2R 20502275 20502315 chr2R 20502406 20502448 8 133 3.0 8.0 5.5 1.2 173 chr2R 20502275 intergenic not near genes chr2R 20502362 intergenic not near genes chr2R 20502448 intergenic not near genes chr2R_8_20500001 chr2R_20500001 RAL-492 1073 chr2R 20523034 20523066 chr2R 20523149 20523170 10 116 8.0 3.5 5.8 1.5 136 chr2R 20523034 intergenic not near genes chr2R 20523102 intergenic not near genes chr2R 20523170 intergenic not near genes chr2R_10_20520001 chr2R_20520001 RAL-492 1074 chr2R 20541980 20542017 chr2R 20542078 20542086 12 95 5.5 3.5 4.5 2.2 106 chr2R 20541980 intergenic not near genes chr2R 20542033 intergenic not near genes chr2R 20542086 intergenic not near genes chr2R_12_20540001 chr2R_20540001 RAL-492 1075 chr2R 20652944 20652963 chr2R 20653023 20653061 6 87 3.5 7.5 5.5 0.9 117 chr2R 20652944 intron,3` UTR Lrt +,CG16799 - chr2R 20653002 intron,3` UTR Lrt +,CG16799 - chr2R 20653061 intron,3` UTR Lrt +,CG16799 - chr2R_6_20650001 chr2R_20650001 RAL-492 1076 chr2R 20665931 20665955 chr2R 20666013 20666020 6 88 4.5 1.0 2.8 1.6 89 chr2R 20665931 intron Fem-1 - chr2R 20665976 intron Fem-1 - chr2R 20666020 intron Fem-1 - chr2R_6_20665001 chr2R_20665001 RAL-492 1077 chr2R 20700713 20700719 chr2R 20700810 20700813 4 96 12.0 2.5 7.2 0.5 100 chr2R 20700713 intron dpr + chr2R 20700763 intron dpr + chr2R 20700813 intron dpr + chr2R_4_20700001 chr2R_20700001 RAL-492 1078 chr2R 20700722 20700753 chr2R 20700805 20700848 9 94 4.5 2.0 3.2 2.1 126 chr2R 20700722 intron dpr + chr2R 20700785 intron dpr + chr2R 20700848 intron dpr + chr2R_9_20700001 chr2R_20700001 RAL-492 1079 chr2R 20739424 20739479 chr2R 20744212 20744251 F-element 7 4775 2.5 2.5 2.5 2.0 4827 chr2R 20739424 intron dpr + chr2R 20741838 intron dpr + chr2R 20744251 intron dpr + chr2R_7_20740001 chr2R_20740001 RAL-492 1080 chr2R 20783291 20783330 chr2R 20788083 20788122 F-element 9 4791 3.0 5.0 4.0 1.8 4831 chr2R 20783291 intergenic not near genes chr2R 20785706 intergenic not near genes chr2R 20788122 intergenic CG43666 - chr2R_9_20785001 chr2R_20785001 RAL-492 1081 chr2R 20830527 20830570 chr2R 20830620 20830667 22 91 5.0 3.5 4.2 4.2 140 chr2R 20830527 intron,intron insc -,sktl - chr2R 20830597 intron,intron insc -,sktl - chr2R 20830667 intron,intron insc -,sktl - chr2R_22_20830001 chr2R_20830001 RAL-492 1082 chr2R 20908093 20908127 chr2R 20908208 20908249 6 118 8.0 0.0 4.0 1.2 156 chr2R 20908093 intergenic not near genes chr2R 20908171 intergenic not near genes chr2R 20908249 intergenic not near genes chr2R_6_20905001 chr2R_20905001 RAL-492 1083 chr2R 20908132 20908138 chr2R 20908206 20908261 6 107 5.5 0.0 2.8 1.6 129 chr2R 20908132 intergenic not near genes chr2R 20908196 intergenic not near genes chr2R 20908261 intergenic not near genes chr2R_6_20905001 chr2R_20905001 RAL-492 1084 chr2R 20967009 20967054 chr2R 20967106 20967151 7 97 3.0 0.0 1.5 2.8 142 chr2R 20967009 intergenic not near genes chr2R 20967080 intergenic not near genes chr2R 20967151 intergenic not near genes chr2R_7_20965001 chr2R_20965001 RAL-492 1085 chr2R 21057470 21057479 chr2R 21057571 21057580 4 101 5.0 0.0 2.5 1.1 110 chr2R 21057470 intergenic shg -,cpa + chr2R 21057525 intergenic cpa +,shg - chr2R 21057580 intergenic cpa +,shg - chr2R_4_21055001 chr2R_21055001 RAL-492 1086 chr2R 21103525 21103551 chr2R 21103625 21103651 7 97 2.5 0.0 1.2 3.2 126 chr2R 21103525 intron ktub + chr2R 21103588 intron ktub + chr2R 21103651 intron ktub + chr2R_7_21100001 chr2R_21100001 RAL-492 1087 chr2R 21182910 21182927 chr2R 21183156 21183172 4 245 4.0 3.0 3.5 0.9 262 chr2R 21182910 intergenic Pu +,tud + chr2R 21183041 intergenic tud +,Pu + chr2R 21183172 intergenic tud + chr2R_4_21180001 chr2R_21180001 RAL-492 1088 chr2R 21285413 21285435 chr2R 21285510 21285532 7 95 7.0 8.0 7.5 0.8 119 chr2R 21285413 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285472 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285532 3` UTR,3` UTR MFS16 +,CG10505 - chr2R_7_21285001 chr2R_21285001 RAL-492 1089 chr2R 21344425 21344467 chr2R 21344531 21344570 14 101 5.5 2.5 4.0 2.8 145 chr2R 21344425 exon CG15666 + chr2R 21344498 intron CG15666 + chr2R 21344570 intron CG15666 + chr2R_14_21340001 chr2R_21340001 RAL-492 1090 chr2R 21366505 21366539 chr2R 21366630 21366664 6 125 3.5 3.0 3.2 1.4 159 chr2R 21366505 intron cv-2 - chr2R 21366584 intron cv-2 - chr2R 21366664 exon cv-2 - chr2R_6_21365001 chr2R_21365001 RAL-492 1091 chr2R 21381130 21381158 chr2R 21381228 21381256 13 97 6.0 1.0 3.5 2.9 126 chr2R 21381130 intergenic not near genes chr2R 21381193 intergenic not near genes chr2R 21381256 intergenic not near genes chr2R_13_21380001 chr2R_21380001 RAL-492 1092 chr2R 21398422 21398451 chr2R 21398598 21398598 9 173 3.5 5.5 4.5 1.6 176 chr2R 21398422 exon Sdc - chr2R 21398510 exon Sdc - chr2R 21398598 intron Sdc - chr2R_9_21395001 chr2R_21395001 RAL-492 1093 chr2R 21418856 21418878 chr2R 21419253 21419296 8 410 6.0 5.0 5.5 1.2 440 chr2R 21418856 intron Sdc - chr2R 21419076 intron Sdc - chr2R 21419296 intron Sdc - chr2R_8_21415001 chr2R_21415001 RAL-492 1094 chr2R 21534437 21534492 chr2R 21534550 21534564 13 95 4.0 3.5 3.8 2.7 127 chr2R 21534437 intron Egfr + chr2R 21534500 intron Egfr + chr2R 21534564 intron Egfr + chr2R_13_21530001 chr2R_21530001 RAL-492 1095 chr2R 21612336 21612383 chr2R 21612440 21612489 17 104 4.5 4.0 4.2 3.3 153 chr2R 21612336 intron CG15673 - chr2R 21612412 intron CG15673 - chr2R 21612489 intron CG15673 - chr2R_17_21610001 chr2R_21610001 RAL-492 1096 chr2R 21625797 21625819 chr2R 21625893 21625915 6 96 6.5 8.0 7.2 0.7 118 chr2R 21625797 exon mahj + chr2R 21625856 intron mahj + chr2R 21625915 intron mahj + chr2R_6_21625001 chr2R_21625001 RAL-492 1097 chr2R 21721578 21721611 chr2R 21721673 21721718 5 102 2.5 0.0 1.2 2.3 140 chr2R 21721578 intron LBR + chr2R 21721648 intron LBR + chr2R 21721718 intron LBR + chr2R_5_21720001 chr2R_21720001 RAL-492 1098 chr2R 21730900 21730906 chr2R 21731023 21731032 4 124 3.0 10.0 6.5 0.5 132 chr2R 21730900 intergenic not near genes chr2R 21730966 intergenic not near genes chr2R 21731032 intergenic not near genes chr2R_4_21730001 chr2R_21730001 RAL-492 1099 chr2R 21738287 21738309 chr2R 21747437 21747481 roo 6 9160 3.5 2.5 3.0 1.5 9194 chr2R 21738287 intergenic not near genes chr2R 21742884 intergenic not near genes chr2R 21747481 intergenic not near genes chr2R_6_21740001 chr2R_21740001 RAL-492 1100 chr2R 21753068 21753109 chr2R 21753568 21753614 roo 17 501 3.0 5.0 4.0 3.4 546 chr2R 21753068 intergenic not near genes chr2R 21753341 intergenic not near genes chr2R 21753614 intergenic not near genes chr2R_17_21750001 chr2R_21750001 RAL-492 1101 chr2R 21795907 21795951 chr2R 21796015 21796059 8 107 1.5 3.0 2.2 2.5 152 chr2R 21795907 intergenic CG34204 + chr2R 21795983 intergenic CG34204 + chr2R 21796059 intergenic CG34204 + chr2R_8_21795001 chr2R_21795001 RAL-492 1102 chr2R 21809507 21809557 chr2R 21817767 21817797 roo 10 8257 2.5 5.0 3.8 2.1 8290 chr2R 21809507 intergenic not near genes chr2R 21813652 intergenic not near genes chr2R 21817797 intergenic not near genes chr2R_10_21810001 chr2R_21810001 RAL-492 1103 chr2R 21888297 21888322 chr2R 21888408 21888422 9 108 5.0 9.0 7.0 1.1 125 chr2R 21888297 intron Fili + chr2R 21888360 intron Fili + chr2R 21888422 intron Fili + chr2R_9_21885001 chr2R_21885001 RAL-492 1104 chr2R 21906255 21906303 chr2R 21906375 21906395 10 118 4.0 5.5 4.8 1.7 140 chr2R 21906255 intron Fili + chr2R 21906325 intron Fili + chr2R 21906395 intron Fili + chr2R_10_21905001 chr2R_21905001 RAL-492 1105 chr2R 21922581 21922624 chr2R 21922677 21922718 15 96 3.5 5.0 4.2 2.9 137 chr2R 21922581 intron Fili + chr2R 21922650 intron Fili + chr2R 21922718 intron Fili + chr2R_15_21920001 chr2R_21920001 RAL-492 1106 chr2R 22004276 22004320 chr2R 22004390 22004428 6 107 3.5 0.0 1.8 2.1 152 chr2R 22004276 intron CG34370 - chr2R 22004352 intron CG34370 - chr2R 22004428 intron CG34370 - chr2R_6_22000001 chr2R_22000001 RAL-492 1107 chr2R 22009791 22009808 chr2R 22009870 22009881 5 87 2.5 6.0 4.2 1.0 90 chr2R 22009791 intron CG34370 - chr2R 22009836 intron CG34370 - chr2R 22009881 intron CG34370 - chr2R_5_22005001 chr2R_22005001 RAL-492 1108 chr2R 22037755 22037801 chr2R 22037857 22037903 7 102 3.0 0.0 1.5 2.8 148 chr2R 22037755 intron CG34370 - chr2R 22037829 intron CG34370 - chr2R 22037903 intron CG34370 - chr2R_7_22035001 chr2R_22035001 RAL-492 1109 chr2R 22046018 22046034 chr2R 22046116 22046120 6 95 3.5 9.0 6.2 0.8 102 chr2R 22046018 intergenic not near genes chr2R 22046069 intergenic not near genes chr2R 22046120 intergenic not near genes chr2R_6_22045001 chr2R_22045001 RAL-492 1110 chr2R 22185669 22185694 chr2R 22185785 22185810 5 117 3.0 1.0 2.0 1.7 141 chr2R 22185669 3` UTR MED16 + chr2R 22185740 3` UTR MED16 + chr2R 22185810 3` UTR MED16 + chr2R_5_22185001 chr2R_22185001 RAL-492 1111 chr2R 22252386 22252430 chr2R 22252487 22252531 11 102 2.5 7.0 4.8 1.9 145 chr2R 22252386 intron dve + chr2R 22252458 intron dve + chr2R 22252531 intron dve + chr2R_11_22250001 chr2R_22250001 RAL-492 1112 chr2R 22272062 22272102 chr2R 22272183 22272224 14 121 7.5 7.5 7.5 1.6 162 chr2R 22272062 intron dve + chr2R 22272143 intron dve + chr2R 22272224 intron dve + chr2R_14_22270001 chr2R_22270001 RAL-492 1113 chr2R 22297703 22297724 chr2R 22297799 22297820 6 95 0.0 1.0 0.5 4.0 117 chr2R 22297703 intergenic not near genes chr2R 22297762 intergenic wdp - chr2R 22297820 intergenic wdp - chr2R_6_22295001 chr2R_22295001 RAL-492 1114 chr2R 22349708 22349727 chr2R 22351472 22351486 jockey 5 1775 5.0 7.0 6.0 0.7 1778 chr2R 22349708 intron Liprin-gamma - chr2R 22350597 intron Liprin-gamma - chr2R 22351486 intron Liprin-gamma - chr2R_5_22350001 chr2R_22350001 RAL-492 1115 chr2R 22360369 22360372 chr2R 22360814 22360823 jockey 4 450 13.0 3.0 8.0 0.4 454 chr2R 22360369 intron Liprin-gamma - chr2R 22360596 intron Liprin-gamma - chr2R 22360823 intron Liprin-gamma - chr2R_4_22360001 chr2R_22360001 RAL-492 1116 chr2R 22377811 22377834 chr2R 22377893 22377936 6 84 6.0 2.5 4.2 1.2 125 chr2R 22377811 3` UTR Rtf1 + chr2R 22377874 3` UTR Rtf1 + chr2R 22377936 3` UTR Rtf1 + chr2R_6_22375001 chr2R_22375001 RAL-492 1117 chr2R 22380345 22380379 chr2R 22380456 22380490 7 111 4.5 0.0 2.2 2.2 145 chr2R 22380345 intron wrapper + chr2R 22380418 intron wrapper + chr2R 22380490 intron wrapper + chr2R_7_22380001 chr2R_22380001 RAL-492 1118 chr2R 22460368 22460403 chr2R 22460467 22460502 4 99 2.5 7.0 4.8 0.7 134 chr2R 22460368 intron CG10384 + chr2R 22460435 intron CG10384 + chr2R 22460502 intron CG10384 + chr2R_4_22460001 chr2R_22460001 RAL-492 1119 chr2R 22503782 22503798 chr2R 22503897 22503914 6 116 2.0 2.0 2.0 2.0 132 chr2R 22503782 intron px - chr2R 22503848 intron px - chr2R 22503914 intron px - chr2R_6_22500001 chr2R_22500001 RAL-492 1120 chr2R 22525743 22525786 chr2R 22529321 22529359 jockey 8 3578 2.5 2.5 2.5 2.3 3616 chr2R 22525743 intron px - chr2R 22527551 intron px - chr2R 22529359 intron px - chr2R_8_22525001 chr2R_22525001 RAL-492 1121 chr2R 22580426 22580439 chr2R 22586590 22586603 diver 4 6162 4.0 4.0 4.0 0.8 6177 chr2R 22580426 intron dnr1 - chr2R 22583514 intron dnr1 - chr2R 22586603 intron dnr1 - chr2R_4_22580001 chr2R_22580001 RAL-492 1122 chr2R 22691748 22691770 chr2R 22691867 22691887 5 120 4.0 6.5 5.2 0.8 139 chr2R 22691748 5` UTR CR44764 + chr2R 22691818 5` UTR CR44764 + chr2R 22691887 5` UTR CR44764 + chr2R_5_22690001 chr2R_22690001 RAL-492 1123 chr2R 22735239 22735289 chr2R 22735335 22735353 7 91 4.0 2.5 3.2 1.7 114 chr2R 22735239 intron jbug - chr2R 22735296 intron jbug - chr2R 22735353 intron jbug - chr2R_7_22735001 chr2R_22735001 RAL-492 1124 chr2R 22834293 22834294 chr2R 22836312 22836321 5 2021 34.5 8.0 21.2 0.2 2028 chr2R 22834293 exon CG30265 + chr2R 22835307 exon CG12490 + chr2R 22836321 intron CG12490 + chr2R_5_22835001 chr2R_22835001 RAL-492 1125 chr2R 22839474 22839482 chr2R 22839571 22839581 7 98 5.0 0.0 2.5 2.0 107 chr2R 22839474 intergenic CG9825 + chr2R 22839528 intergenic CG9825 + chr2R 22839581 intergenic CG9825 + chr2R_7_22835001 chr2R_22835001 RAL-492 1126 chr2R 22843018 22843048 chr2R 22845000 22845030 flea 9 1982 8.0 3.5 5.8 1.3 2012 chr2R 22843018 intergenic CG9826 + chr2R 22844024 intergenic not near genes chr2R 22845030 intergenic not near genes chr2R_9_22840001 chr2R_22840001 RAL-492 1127 chr2R 22988301 22988323 chr2R 22988399 22988424 7 95 2.5 6.0 4.2 1.3 123 chr2R 22988301 intron twi + chr2R 22988362 intron twi + chr2R 22988424 intron twi + chr2R_7_22985001 chr2R_22985001 RAL-492 1128 chr2R 23008777 23008827 chr2R 23008891 23008926 11 103 1.0 5.0 3.0 2.8 149 chr2R 23008777 intron twi + chr2R 23008852 intron twi + chr2R 23008926 intron twi + chr2R_11_23005001 chr2R_23005001 RAL-492 1129 chr2R 23041185 23041200 chr2R 23041283 23041298 4 98 4.5 4.0 4.2 0.8 113 chr2R 23041185 intron,intron twi +,CG42741 - chr2R 23041242 intron,intron twi +,CG42741 - chr2R 23041298 intron,intron twi +,CG42741 - chr2R_4_23040001 chr2R_23040001 RAL-492 1130 chr2R 23052631 23052684 chr2R 23052727 23052780 13 94 4.0 4.5 4.2 2.5 149 chr2R 23052631 intergenic not near genes chr2R 23052706 intergenic not near genes chr2R 23052780 intergenic not near genes chr2R_13_23050001 chr2R_23050001 RAL-492 1131 chr2R 23061757 23061785 chr2R 23061869 23061899 7 110 5.0 8.0 6.5 0.9 142 chr2R 23061757 3` UTR l(2)06496 - chr2R 23061828 3` UTR l(2)06496 - chr2R 23061899 3` UTR l(2)06496 - chr2R_7_23060001 chr2R_23060001 RAL-492 1132 chr2R 23158328 23158348 chr2R 23158425 23158428 4 92 10.5 10.0 10.2 0.4 100 chr2R 23158328 intron CG9899 + chr2R 23158378 intron CG9899 + chr2R 23158428 intron CG9899 + chr2R_4_23155001 chr2R_23155001 RAL-492 1133 chr2R 23175018 23175068 chr2R 23175115 23175137 11 92 3.5 7.0 5.2 1.8 119 chr2R 23175018 intron CG34371 - chr2R 23175078 intron CG34371 - chr2R 23175137 intron CG34371 - chr2R_11_23175001 chr2R_23175001 RAL-492 1134 chr2R 23188548 23188584 chr2R 23188645 23188682 10 96 3.0 4.0 3.5 2.2 134 chr2R 23188548 intron CG34371 - chr2R 23188615 intron CG34371 - chr2R 23188682 intron CG34371 - chr2R_10_23185001 chr2R_23185001 RAL-492 1135 chr2R 23190004 23190019 chr2R 23190099 23190117 8 99 12.0 0.5 6.2 1.1 113 chr2R 23190004 intron CG34371 - chr2R 23190060 intron CG34371 - chr2R 23190117 intron CG34371 - chr2R_8_23190001 chr2R_23190001 RAL-492 1136 chr2R 23236797 23236990 chr2R 23236915 23237102 13 109 0.0 0.0 0.0 13.0 305 chr2R 23236797 intergenic not near genes chr2R 23236950 intergenic not near genes chr2R 23237102 intergenic not near genes chr2R_13_23235001 chr2R_23235001 RAL-492 1137 chr2R 23253919 23253923 chr2R 23254260 23254264 5 340 11.0 0.0 5.5 0.8 345 chr2R 23253919 intergenic not near genes chr2R 23254092 intergenic not near genes chr2R 23254264 intergenic not near genes chr2R_5_23250001 chr2R_23250001 RAL-492 1138 chr2R 23257508 23257529 chr2R 23257606 23257626 5 99 0.5 8.0 4.2 1.0 118 chr2R 23257508 intergenic not near genes chr2R 23257567 intergenic not near genes chr2R 23257626 intergenic not near genes chr2R_5_23255001 chr2R_23255001 RAL-492 1139 chr2R 23269502 23269521 chr2R 23269669 23269688 5 167 6.0 4.0 5.0 0.8 186 chr2R 23269502 intergenic not near genes chr2R 23269595 intergenic not near genes chr2R 23269688 intergenic not near genes chr2R_5_23265001 chr2R_23265001 RAL-492 1140 chr2R 23269522 23269544 chr2R 23269662 23269662 9 148 3.0 4.0 3.5 2.0 140 chr2R 23269522 intergenic not near genes chr2R 23269592 intergenic not near genes chr2R 23269662 intergenic not near genes chr2R_9_23265001 chr2R_23265001 RAL-492 1141 chr2R 23278241 23278290 chr2R 23278469 23278518 14 228 2.0 2.0 2.0 4.7 277 chr2R 23278241 intergenic not near genes chr2R 23278380 intergenic not near genes chr2R 23278518 intergenic not near genes chr2R_14_23275001 chr2R_23275001 RAL-492 1142 chr2R 23297916 23297965 chr2R 23298031 23298081 13 115 0.5 6.0 3.2 3.1 165 chr2R 23297916 intergenic not near genes chr2R 23297998 intergenic not near genes chr2R 23298081 intergenic not near genes chr2R_13_23295001 chr2R_23295001 RAL-492 1143 chr2R 23304258 23304309 chr2R 23304643 23304696 13 383 2.0 0.5 1.2 5.9 438 chr2R 23304258 intergenic not near genes chr2R 23304477 intergenic not near genes chr2R 23304696 intergenic not near genes chr2R_13_23300001 chr2R_23300001 RAL-492 1144 chr2R 23334656 23334688 chr2R 23335722 23335758 6 1066 6.5 5.5 6.0 0.9 1102 chr2R 23334656 intergenic not near genes chr2R 23335207 intergenic not near genes chr2R 23335758 intergenic not near genes chr2R_6_23335001 chr2R_23335001 RAL-492 1145 chr2R 23423718 23423773 chr2R 23423896 23423943 10 172 5.0 3.0 4.0 2.0 225 chr2R 23423718 intron CG9815 - chr2R 23423830 intron CG9815 - chr2R 23423943 intron CG9815 - chr2R_10_23420001 chr2R_23420001 RAL-492 1146 chr2R 23437210 23437242 chr2R 23437307 23437317 5 89 3.0 6.5 4.8 0.9 107 chr2R 23437210 intergenic not near genes chr2R 23437264 intergenic not near genes chr2R 23437317 intergenic not near genes chr2R_5_23435001 chr2R_23435001 RAL-492 1147 chr2R 23508911 23508938 chr2R 23509048 23509075 5 137 3.0 6.5 4.8 0.9 164 chr2R 23508911 intergenic not near genes chr2R 23508993 intergenic not near genes chr2R 23509075 intergenic not near genes chr2R_5_23505001 chr2R_23505001 RAL-492 1148 chr2R 23522420 23522447 chr2R 23522496 23522503 10 78 5.0 5.0 5.0 1.7 83 chr2R 23522420 intron RabX1 - chr2R 23522462 intron RabX1 - chr2R 23522503 intron RabX1 - chr2R_10_23520001 chr2R_23520001 RAL-492 1149 chr2R 23553712 23553747 chr2R 23553821 23553857 5 109 2.5 2.5 2.5 1.4 145 chr2R 23553712 intron pita - chr2R 23553784 intron pita - chr2R 23553857 intron pita - chr2R_5_23550001 chr2R_23550001 RAL-492 1150 chr2R 23607026 23607184 chr2R 23607117 23607289 24 103 2.0 2.0 2.0 8.0 263 chr2R 23607026 intron CG17664 - chr2R 23607158 intron CG17664 - chr2R 23607289 intron CG17664 - chr2R_24_23605001 chr2R_23605001 RAL-492 1151 chr2R 23674161 23674192 chr2R 23674261 23674272 11 95 7.0 5.5 6.2 1.5 111 chr2R 23674161 intron Pde8 + chr2R 23674216 intron Pde8 + chr2R 23674272 intron Pde8 + chr2R_11_23670001 chr2R_23670001 RAL-492 1152 chr2R 23748185 23748216 chr2R 23748320 23748355 15 137 4.0 4.0 4.0 3.0 170 chr2R 23748185 3` UTR CG13560 + chr2R 23748270 3` UTR CG13560 + chr2R 23748355 3` UTR CG13560 + chr2R_15_23745001 chr2R_23745001 RAL-492 1153 chr2R 23748217 23748222 chr2R 23748314 23748342 4 123 3.5 3.0 3.2 1.0 125 chr2R 23748217 3` UTR CG13560 + chr2R 23748280 3` UTR CG13560 + chr2R 23748342 3` UTR CG13560 + chr2R_4_23745001 chr2R_23745001 RAL-492 1154 chr2R 23771256 23771309 chr2R 23771357 23771407 4 99 3.5 0.0 1.8 1.4 151 chr2R 23771256 intron CG9850 - chr2R 23771332 intron CG9850 - chr2R 23771407 intron CG9850 - chr2R_4_23770001 chr2R_23770001 RAL-492 1155 chr2R 23914283 23914329 chr2R 23921926 23921972 412 14 7642 3.0 6.5 4.8 2.4 7689 chr2R 23914283 exon kcc + chr2R 23918128 intron kcc + chr2R 23921972 exon kcc + chr2R_14_23915001 chr2R_23915001 RAL-492 1156 chr2R 24058029 24058054 chr2R 24058128 24058155 16 99 6.5 7.0 6.8 2.1 126 chr2R 24058029 intron eIF-5A + chr2R 24058092 intron eIF-5A + chr2R 24058155 intron eIF-5A + chr2R_16_24055001 chr2R_24055001 RAL-492 1157 chr2R 24073436 24073481 chr2R 24073628 24073673 11 192 3.0 3.5 3.2 2.6 237 chr2R 24073436 3` UTR CG3209 + chr2R 24073554 intergenic CG3209 + chr2R 24073673 intergenic CG3209 + chr2R_11_24070001 chr2R_24070001 RAL-492 1158 chr2R 24147076 24147097 chr2R 24154644 24154665 412 13 7576 4.5 9.0 6.8 1.7 7589 chr2R 24147076 intron Dat + chr2R 24150870 intron Dat + chr2R 24154665 intron Dat + chr2R_13_24150001 chr2R_24150001 RAL-492 1159 chr2R 24177221 24177260 chr2R 24184722 24184762 412 9 7501 3.5 5.5 4.5 1.6 7541 chr2R 24177221 3` UTR Nop60B + chr2R 24180992 intron Nop60B + chr2R 24184762 3` UTR Nop60B + chr2R_9_24180001 chr2R_24180001 RAL-492 1160 chr2R 24226850 24226897 chr2R 24226938 24226992 21 90 7.0 4.5 5.8 3.1 142 chr2R 24226850 intron CG30419 - chr2R 24226921 intron CG30419 - chr2R 24226992 intron CG30419 - chr2R_21_24225001 chr2R_24225001 RAL-492 1161 chr2R 24353409 24353461 chr2R 24361788 24361824 roo 14 8378 1.5 4.5 3.0 3.5 8415 chr2R 24353409 intron,intron bs +,CR44811 - chr2R 24357616 intron,intron bs +,CR44811 - chr2R 24361824 intron,intron bs +,CR44811 - chr2R_14_24355001 chr2R_24355001 RAL-492 1162 chr2R 24430925 24430946 chr2R 24431010 24431049 11 104 0.0 4.5 2.2 3.4 124 chr2R 24430925 intergenic CG15873 -,Pgam5-2 - chr2R 24430987 intergenic CG15873 -,Pgam5-2 - chr2R 24431049 intergenic Pgam5-2 -,CG15873 - chr2R_11_24430001 chr2R_24430001 RAL-492 1163 chr2R 24590075 24590104 chr2R 24590203 24590228 4 127 4.5 6.5 5.5 0.6 153 chr2R 24590075 intron pio + chr2R 24590152 intron pio + chr2R 24590228 intron pio + chr2R_4_24590001 chr2R_24590001 RAL-492 1164 chr2R 24592931 24592956 chr2R 24593044 24593069 7 113 8.5 2.0 5.2 1.1 138 chr2R 24592931 intron pio + chr2R 24593000 intron pio + chr2R 24593069 intron pio + chr2R_7_24590001 chr2R_24590001 RAL-492 1165 chr2R 24647576 24647618 chr2R 24655151 24655193 412 8 7575 4.0 3.5 3.8 1.7 7617 chr2R 24647576 intergenic not near genes chr2R 24651384 intergenic not near genes chr2R 24655193 intergenic not near genes chr2R_8_24650001 chr2R_24650001 RAL-492 1166 chr2R 24719807 24719826 chr2R 24719920 24719942 4 123 4.0 13.5 8.8 0.4 135 chr2R 24719807 intron Mid1 - chr2R 24719874 intron Mid1 - chr2R 24719942 intron Mid1 - chr2R_4_24715001 chr2R_24715001 RAL-492 1167 chr2R 24727893 24727917 chr2R 24735405 24735428 mdg1 6 7521 1.5 8.5 5.0 1.0 7535 chr2R 24727893 intron Mid1 - chr2R 24731660 intron Mid1 - chr2R 24735428 intron Mid1 - chr2R_6_24730001 chr2R_24730001 RAL-492 1168 chr2R 24763605 24763641 chr2R 24765585 24765620 G2 6 1977 3.5 2.0 2.8 1.6 2015 chr2R 24763605 exon CG3894 + chr2R 24764612 intron CG3894 + chr2R 24765620 exon CG3894 + chr2R_6_24760001 chr2R_24760001 RAL-492 1169 chr2R 24844321 24844370 chr2R 24844427 24844476 10 104 3.0 3.5 3.2 2.4 155 chr2R 24844321 intergenic not near genes chr2R 24844398 intergenic not near genes chr2R 24844476 intergenic not near genes chr2R_10_24840001 chr2R_24840001 RAL-492 1170 chr2R 24847582 24847595 chr2R 24847698 24847699 6 114 7.5 1.0 4.2 1.2 117 chr2R 24847582 intergenic not near genes chr2R 24847640 intergenic not near genes chr2R 24847699 intergenic not near genes chr2R_6_24845001 chr2R_24845001 RAL-492 1171 chr2R 24884033 24884066 chr2R 24884135 24884168 16 102 6.0 3.0 4.5 2.9 135 chr2R 24884033 intron NKAIN + chr2R 24884100 intron NKAIN + chr2R 24884168 intron NKAIN + chr2R_16_24880001 chr2R_24880001 RAL-492 1172 chr2R 25101254 25101307 chr2R 25101376 25101426 16 121 5.0 3.0 4.0 3.2 172 chr2R 25101254 intron lov - chr2R 25101340 intron lov - chr2R 25101426 intron lov - chr2R_16_25100001 chr2R_25100001 RAL-492 1173 chr2R 25122943 25122993 chr2R 25123042 25123092 13 98 2.5 2.5 2.5 3.7 149 chr2R 25122943 intron lov - chr2R 25123018 intron lov - chr2R 25123092 intron lov - chr2R_13_25120001 chr2R_25120001 RAL-492 1174 chr2R 25141637 25141683 chr2R 25159347 25159387 roo 13 17709 2.5 7.5 5.0 2.2 17750 chr2R 25141637 intergenic not near genes chr2R 25150512 intergenic not near genes chr2R 25159387 intergenic not near genes chr2R_13_25150001 chr2R_25150001 RAL-492 1175 chr2R 25180752 25180794 chr2R 25180849 25180890 7 95 1.0 1.5 1.2 3.2 138 chr2R 25180752 intergenic not near genes chr2R 25180821 intergenic not near genes chr2R 25180890 intergenic not near genes chr2R_7_25180001 chr2R_25180001 RAL-492 1176 chr2R 25181101 25181130 chr2R 25181213 25181247 9 116 1.5 3.0 2.2 2.8 146 chr2R 25181101 intergenic not near genes chr2R 25181174 intergenic not near genes chr2R 25181247 intergenic not near genes chr2R_9_25180001 chr2R_25180001 RAL-492 1177 chr2R 25191710 25191719 chr2R 25191807 25191817 6 97 3.5 1.5 2.5 1.7 107 chr2R 25191710 intron CG9380 - chr2R 25191764 intron CG9380 - chr2R 25191817 intron CG9380 - chr2R_6_25190001 chr2R_25190001 RAL-492 1178 chr2R 25236014 25236031 chr2R 25236145 25236150 7 129 4.0 0.0 2.0 2.3 136 chr2R 25236014 intron CG9380 - chr2R 25236082 intron CG9380 - chr2R 25236150 intron CG9380 - chr2R_7_25235001 chr2R_25235001 RAL-492 1179 chr2R 25236034 25236044 chr2R 25236144 25236160 5 124 1.5 0.0 0.8 2.8 126 chr2R 25236034 intron CG9380 - chr2R 25236097 intron CG9380 - chr2R 25236160 intron CG9380 - chr2R_5_25235001 chr2R_25235001 RAL-492 1180 chr2R 25253427 25253471 chr2R 25253523 25253539 11 91 6.0 3.5 4.8 1.9 112 chr2R 25253427 intron,intron CG9380 -,CG30428 + chr2R 25253483 intron,intron CG9380 -,CG30428 + chr2R 25253539 intron,intron CG9380 -,CG30428 + chr2R_11_25250001 chr2R_25250001 RAL-492 1181 chr3L 34671 34714 chr3L 34788 34838 8 115 5.5 4.5 5.0 1.3 167 chr3L 34671 intergenic not near genes chr3L 34754 intergenic not near genes chr3L 34838 intergenic not near genes chr3L_8_30001 chr3L_30001 RAL-492 1182 chr3L 48744 48784 chr3L 48846 48873 13 99 4.5 4.5 4.5 2.4 129 chr3L 48744 intergenic not near genes chr3L 48808 intergenic not near genes chr3L 48873 intergenic not near genes chr3L_13_45001 chr3L_45001 RAL-492 1183 chr3L 68980 69015 chr3L 69068 69075 11 95 1.5 3.5 2.5 3.1 95 chr3L 68980 3` UTR Lsp1gamma + chr3L 69028 intergenic Lsp1gamma +,CR44510 + chr3L 69075 intergenic CR44510 +,Lsp1gamma + chr3L_11_65001 chr3L_65001 RAL-492 1184 chr3L 71914 71933 chr3L 72016 72035 7 102 12.5 5.5 9.0 0.7 121 chr3L 71914 intergenic CR43988 - chr3L 71974 intergenic CR43988 - chr3L 72035 intergenic CR43988 - chr3L_7_70001 chr3L_70001 RAL-492 1185 chr3L 71939 71958 chr3L 72012 72061 13 100 7.0 5.0 6.0 1.9 122 chr3L 71939 intergenic CR43988 - chr3L 72000 intergenic CR43988 - chr3L 72061 intergenic CR43988 - chr3L_13_70001 chr3L_70001 RAL-492 1186 chr3L 104631 104659 chr3L 104764 104792 6 132 4.0 2.0 3.0 1.5 161 chr3L 104631 intergenic not near genes chr3L 104712 intergenic not near genes chr3L 104792 intergenic not near genes chr3L_6_100001 chr3L_100001 RAL-492 1187 chr3L 107864 107905 chr3L 108175 108210 15 309 4.0 1.5 2.8 3.9 346 chr3L 107864 intergenic not near genes chr3L 108037 intergenic not near genes chr3L 108210 intergenic not near genes chr3L_15_105001 chr3L_105001 RAL-492 1188 chr3L 110196 110242 chr3L 119383 119428 roo 11 9185 4.5 5.5 5.0 1.8 9232 chr3L 110196 intergenic not near genes chr3L 114812 intergenic not near genes chr3L 119428 intergenic not near genes chr3L_11_110001 chr3L_110001 RAL-492 1189 chr3L 122097 122130 chr3L 122197 122229 10 96 3.0 2.5 2.8 2.6 132 chr3L 122097 intergenic not near genes chr3L 122163 intergenic not near genes chr3L 122229 intergenic not near genes chr3L_10_120001 chr3L_120001 RAL-492 1190 chr3L 164788 164827 chr3L 164940 164982 17 155 46.5 40.5 43.5 0.4 194 chr3L 164788 intron p130CAS + chr3L 164885 intron p130CAS + chr3L 164982 intron p130CAS + chr3L_17_160001 chr3L_160001 RAL-492 1191 chr3L 376013 376029 chr3L 376334 376351 6 321 3.5 5.5 4.5 1.1 338 chr3L 376013 intron trh - chr3L 376182 intron trh - chr3L 376351 intron trh - chr3L_6_375001 chr3L_375001 RAL-492 1192 chr3L 402669 402716 chr3L 409741 409748 297 23 7065 6.0 6.5 6.2 3.2 7079 chr3L 402669 intergenic not near genes chr3L 406208 intergenic not near genes chr3L 409748 intergenic not near genes chr3L_23_405001 chr3L_405001 RAL-492 1193 chr3L 564464 564515 chr3L 564575 564608 20 103 5.5 6.5 6.0 2.9 144 chr3L 564464 intron hipk + chr3L 564536 intron hipk + chr3L 564608 intron hipk + chr3L_20_560001 chr3L_560001 RAL-492 1194 chr3L 566776 566825 chr3L 567149 567189 16 370 1.5 2.0 1.8 5.7 413 chr3L 566776 intron hipk + chr3L 566982 intron hipk + chr3L 567189 intron hipk + chr3L_16_565001 chr3L_565001 RAL-492 1195 chr3L 592945 592964 chr3L 593041 593060 6 96 0.5 2.0 1.2 2.7 115 chr3L 592945 intergenic MED14 + chr3L 593002 intergenic MED14 + chr3L 593060 intergenic MED14 + chr3L_6_590001 chr3L_590001 RAL-492 1196 chr3L 603039 603050 chr3L 603141 603153 4 103 3.0 0.0 1.5 1.6 114 chr3L 603039 intron CG13893 - chr3L 603096 intron CG13893 - chr3L 603153 intron CG13893 - chr3L_4_600001 chr3L_600001 RAL-492 1197 chr3L 606878 606923 chr3L 606974 607022 9 96 3.5 1.0 2.2 2.8 144 chr3L 606878 intergenic Reg-2 - chr3L 606950 intergenic Reg-2 - chr3L 607022 intergenic Reg-2 - chr3L_9_605001 chr3L_605001 RAL-492 1198 chr3L 642470 642498 chr3L 642565 642574 6 102 3.5 4.5 4.0 1.2 104 chr3L 642470 5` UTR CR43334 + chr3L 642522 5` UTR CR43334 + chr3L 642574 5` UTR CR43334 + chr3L_6_640001 chr3L_640001 RAL-492 1199 chr3L 651371 651417 chr3L 651479 651525 15 107 2.0 6.5 4.2 2.9 154 chr3L 651371 intergenic Gale +,CG3402 - chr3L 651448 intergenic CG3402 -,Gale + chr3L 651525 intergenic CG3402 -,Gale + chr3L_15_650001 chr3L_650001 RAL-492 1200 chr3L 705885 705928 chr3L 706000 706044 11 115 4.0 2.0 3.0 2.8 159 chr3L 705885 intergenic CG13895 -,CR44514 + chr3L 705964 3` UTR CG13895 - chr3L 706044 3` UTR CG13895 - chr3L_11_705001 chr3L_705001 RAL-492 1201 chr3L 732803 732846 chr3L 733045 733065 5 236 5.5 4.5 5.0 0.8 262 chr3L 732803 intergenic not near genes chr3L 732934 intergenic not near genes chr3L 733065 intergenic not near genes chr3L_5_730001 chr3L_730001 RAL-492 1202 chr3L 789897 789946 chr3L 790402 790451 roo 13 505 2.0 5.5 3.8 2.7 554 chr3L 789897 intergenic not near genes chr3L 790174 intergenic not near genes chr3L 790451 intergenic not near genes chr3L_13_790001 chr3L_790001 RAL-492 1203 chr3L 824024 824043 chr3L 824123 824136 7 100 2.5 0.0 1.2 3.2 112 chr3L 824024 intergenic not near genes chr3L 824080 intergenic not near genes chr3L 824136 intergenic not near genes chr3L_7_820001 chr3L_820001 RAL-492 1204 chr3L 858016 858032 chr3L 866480 866492 Tirant 8 8466 3.0 5.0 4.0 1.6 8476 chr3L 858016 intergenic not near genes chr3L 862254 intergenic not near genes chr3L 866492 intergenic CG12502 + chr3L_8_860001 chr3L_860001 RAL-492 1205 chr3L 899985 900011 chr3L 900089 900115 10 104 0.0 13.0 6.5 1.3 130 chr3L 899985 intergenic not near genes chr3L 900050 intergenic not near genes chr3L 900115 intergenic not near genes chr3L_10_900001 chr3L_900001 RAL-492 1206 chr3L 922158 922182 chr3L 922253 922284 9 94 10.0 2.5 6.2 1.2 126 chr3L 922158 intron Glut1 + chr3L 922221 intron Glut1 + chr3L 922284 intron Glut1 + chr3L_9_920001 chr3L_920001 RAL-492 1207 chr3L 923337 923356 chr3L 923441 923445 4 111 4.0 4.0 4.0 0.8 108 chr3L 923337 intron Glut1 + chr3L 923391 intron Glut1 + chr3L 923445 intron Glut1 + chr3L_4_920001 chr3L_920001 RAL-492 1208 chr3L 925159 925206 chr3L 932604 932652 mdg1 21 7443 4.0 4.0 4.0 4.2 7493 chr3L 925159 intron Glut1 + chr3L 928906 intron Glut1 + chr3L 932652 intron Glut1 + chr3L_21_925001 chr3L_925001 RAL-492 1209 chr3L 933909 933941 chr3L 934032 934058 13 120 5.0 8.5 6.8 1.7 149 chr3L 933909 intron Glut1 + chr3L 933984 intron Glut1 + chr3L 934058 intron Glut1 + chr3L_13_930001 chr3L_930001 RAL-492 1210 chr3L 939756 939803 chr3L 940896 940916 jockey 21 1137 5.5 6.0 5.8 3.1 1160 chr3L 939756 intron Glut1 + chr3L 940336 intron Glut1 + chr3L 940916 intron Glut1 + chr3L_21_940001 chr3L_940001 RAL-492 1211 chr3L 949871 949922 chr3L 949976 950008 20 100 3.5 4.0 3.8 4.2 137 chr3L 949871 intron Glut1 + chr3L 949940 intron Glut1 + chr3L 950008 intron Glut1 + chr3L_20_945001 chr3L_945001 RAL-492 1212 chr3L 958294 958345 chr3L 958398 958448 18 97 5.5 3.5 4.5 3.3 154 chr3L 958294 intron Glut1 + chr3L 958371 intron Glut1 + chr3L 958448 intron Glut1 + chr3L_18_955001 chr3L_955001 RAL-492 1213 chr3L 961006 961041 chr3L 961119 961154 5 113 2.5 3.0 2.8 1.3 148 chr3L 961006 intron Glut1 + chr3L 961080 intron Glut1 + chr3L 961154 intron Glut1 + chr3L_5_960001 chr3L_960001 RAL-492 1214 chr3L 970678 970707 chr3L 971034 971074 7 360 7.5 4.5 6.0 1.0 396 chr3L 970678 intron Glut1 + chr3L 970876 intron Glut1 + chr3L 971074 intron Glut1 + chr3L_7_970001 chr3L_970001 RAL-492 1215 chr3L 1010978 1011212 chr3L 1011078 1011290 15 93 8.0 1.0 4.5 2.7 312 chr3L 1010978 intron trio - chr3L 1011134 intron trio - chr3L 1011290 intron trio - chr3L_15_1010001 chr3L_1010001 RAL-492 1216 chr3L 1021357 1021405 chr3L 1021457 1021504 17 96 6.5 3.5 5.0 2.8 147 chr3L 1021357 intron trio - chr3L 1021430 intron trio - chr3L 1021504 intron trio - chr3L_17_1020001 chr3L_1020001 RAL-492 1217 chr3L 1103972 1104012 chr3L 1104183 1104222 8 205 7.0 3.5 5.2 1.3 250 chr3L 1103972 intergenic not near genes chr3L 1104097 intergenic not near genes chr3L 1104222 intergenic not near genes chr3L_8_1100001 chr3L_1100001 RAL-492 1218 chr3L 1154119 1154162 chr3L 1163289 1163332 roo 20 9168 2.5 1.5 2.0 6.7 9213 chr3L 1154119 intron bab2 - chr3L 1158726 intron bab2 - chr3L 1163332 intron bab2 - chr3L_20_1155001 chr3L_1155001 RAL-492 1219 chr3L 1219576 1219595 chr3L 1227329 1227348 412 5 7751 5.0 4.5 4.8 0.9 7772 chr3L 1219576 intron mwh + chr3L 1223462 intron mwh + chr3L 1227348 intron mwh + chr3L_5_1220001 chr3L_1220001 RAL-492 1220 chr3L 1219596 1219624 chr3L 1227328 1227333 412 7 7738 3.0 4.5 3.8 1.5 7737 chr3L 1219596 intron mwh + chr3L 1223464 intron mwh + chr3L 1227333 intron mwh + chr3L_7_1220001 chr3L_1220001 RAL-492 1221 chr3L 1236225 1236238 chr3L 1236320 1236323 5 92 3.0 0.0 1.5 2.0 98 chr3L 1236225 intron CG9194 + chr3L 1236274 intron CG9194 + chr3L 1236323 intron CG9194 + chr3L_5_1235001 chr3L_1235001 RAL-492 1222 chr3L 1268136 1268166 chr3L 1268340 1268344 10 201 5.5 0.0 2.8 2.6 208 chr3L 1268136 intron CG9134 + chr3L 1268240 intron CG9134 + chr3L 1268344 intron CG9134 + chr3L_10_1265001 chr3L_1265001 RAL-492 1223 chr3L 1286899 1286943 chr3L 1287149 1287162 8 247 3.5 4.0 3.8 1.7 263 chr3L 1286899 intron CG32333 + chr3L 1287030 intron CG32333 + chr3L 1287162 intron CG32333 + chr3L_8_1285001 chr3L_1285001 RAL-492 1224 chr3L 1396746 1396757 chr3L 1396846 1396857 6 100 12.5 7.5 10.0 0.5 111 chr3L 1396746 intron Ptp61F - chr3L 1396802 intron Ptp61F - chr3L 1396857 intron Ptp61F - chr3L_6_1395001 chr3L_1395001 RAL-492 1225 chr3L 1415756 1415760 chr3L 1415859 1415881 6 114 2.5 5.5 4.0 1.2 125 chr3L 1415756 intron Ptp61F - chr3L 1415818 intron Ptp61F - chr3L 1415881 intron Ptp61F - chr3L_6_1415001 chr3L_1415001 RAL-492 1226 chr3L 1415763 1415774 chr3L 1415858 1415894 7 107 1.0 5.0 3.0 1.8 131 chr3L 1415763 intron Ptp61F - chr3L 1415828 intron Ptp61F - chr3L 1415894 intron Ptp61F - chr3L_7_1415001 chr3L_1415001 RAL-492 1227 chr3L 1485727 1485738 chr3L 1486912 1486928 1360 7 1189 6.5 12.0 9.2 0.7 1201 chr3L 1485727 intron stet - chr3L 1486328 intron stet - chr3L 1486928 intron stet - chr3L_7_1485001 chr3L_1485001 RAL-492 1228 chr3L 1501979 1501993 chr3L 1502080 1502093 8 100 1.5 4.5 3.0 2.0 114 chr3L 1501979 intron pUf68 - chr3L 1502036 intron pUf68 - chr3L 1502093 intron pUf68 - chr3L_8_1500001 chr3L_1500001 RAL-492 1229 chr3L 1502004 1502018 chr3L 1502078 1502119 7 95 1.5 4.5 3.0 1.8 115 chr3L 1502004 intron pUf68 - chr3L 1502062 intron pUf68 - chr3L 1502119 intron pUf68 - chr3L_7_1500001 chr3L_1500001 RAL-492 1230 chr3L 1505987 1506031 chr3L 1513604 1513643 17.6 12 7614 5.0 4.5 4.8 2.1 7656 chr3L 1505987 intron,intron Psa +,cue - chr3L 1509815 intron,intron Psa +,cue - chr3L 1513643 intron,intron Psa +,cue - chr3L_12_1505001 chr3L_1505001 RAL-492 1231 chr3L 1536837 1536885 chr3L 1536941 1536983 6 102 3.0 3.5 3.2 1.4 146 chr3L 1536837 intergenic CG12091 -,CG7852 + chr3L 1536910 intergenic CG12091 -,CG7852 + chr3L 1536983 intergenic CG12091 -,CG7852 + chr3L_6_1535001 chr3L_1535001 RAL-492 1232 chr3L 1585919 1585930 chr3L 1586020 1586031 6 101 3.0 4.5 3.8 1.2 112 chr3L 1585919 intron CG13917 + chr3L 1585975 intron CG13917 + chr3L 1586031 intron CG13917 + chr3L_6_1585001 chr3L_1585001 RAL-492 1233 chr3L 1647577 1647617 chr3L 1647675 1647715 12 98 5.0 5.0 5.0 2.0 138 chr3L 1647577 intergenic CG17249 -,Bro + chr3L 1647646 intergenic CG17249 -,Bro + chr3L 1647715 intergenic Bro +,CG17249 - chr3L_12_1645001 chr3L_1645001 RAL-492 1234 chr3L 1740840 1740871 chr3L 1741103 1741134 pogo 7 258 6.5 3.0 4.8 1.2 294 chr3L 1740840 intron Gk + chr3L 1740987 intron Gk + chr3L 1741134 intron Gk + chr3L_7_1740001 chr3L_1740001 RAL-492 1235 chr3L 1853027 1853055 chr3L 1853130 1853156 5 103 2.5 4.5 3.5 1.1 129 chr3L 1853027 intron CG13936 - chr3L 1853092 intron CG13936 - chr3L 1853156 intron CG13936 - chr3L_5_1850001 chr3L_1850001 RAL-492 1236 chr3L 1882345 1882381 chr3L 1882461 1882495 5 114 2.5 0.0 1.2 2.3 150 chr3L 1882345 intron CG13937 - chr3L 1882420 intron CG13937 - chr3L 1882495 intron CG13937 - chr3L_5_1880001 chr3L_1880001 RAL-492 1237 chr3L 1892991 1893031 chr3L 1893142 1893155 10 158 1.5 2.5 2.0 3.3 164 chr3L 1892991 intergenic CG1887 - chr3L 1893073 intergenic CG1887 - chr3L 1893155 intergenic CG1887 - chr3L_10_1890001 chr3L_1890001 RAL-492 1238 chr3L 1925072 1925090 chr3L 1925175 1925197 4 105 0.0 5.5 2.8 1.1 125 chr3L 1925072 intron Dbx + chr3L 1925134 intron Dbx + chr3L 1925197 intron Dbx + chr3L_4_1925001 chr3L_1925001 RAL-492 1239 chr3L 1975718 1975771 chr3L 1975817 1975870 14 98 2.5 4.0 3.2 3.3 152 chr3L 1975718 intergenic not near genes chr3L 1975794 intergenic not near genes chr3L 1975870 intergenic not near genes chr3L_14_1975001 chr3L_1975001 RAL-492 1240 chr3L 1988851 1988874 chr3L 1989022 1989049 7 187 1.5 4.0 2.8 1.8 198 chr3L 1988851 intergenic not near genes chr3L 1988950 intergenic not near genes chr3L 1989049 intergenic not near genes chr3L_7_1985001 chr3L_1985001 RAL-492 1241 chr3L 1991122 1991139 chr3L 1991215 1991237 7 97 7.0 0.0 3.5 1.6 115 chr3L 1991122 intergenic not near genes chr3L 1991180 intergenic not near genes chr3L 1991237 intergenic not near genes chr3L_7_1990001 chr3L_1990001 RAL-492 1242 chr3L 2108238 2108275 chr3L 2113462 2113499 copia 7 5224 1.0 3.0 2.0 2.3 5261 chr3L 2108238 intron sls - chr3L 2110868 intron sls - chr3L 2113499 intron sls - chr3L_7_2110001 chr3L_2110001 RAL-492 1243 chr3L 2168753 2168764 chr3L 2168864 2168875 5 110 18.5 3.0 10.8 0.4 122 chr3L 2168753 exon CG15879 - chr3L 2168814 intron CG15879 - chr3L 2168875 intron CG15879 - chr3L_5_2165001 chr3L_2165001 RAL-492 1244 chr3L 2168767 2168803 chr3L 2168863 2168914 14 104 8.0 3.0 5.5 2.2 147 chr3L 2168767 exon CG15879 - chr3L 2168840 intron CG15879 - chr3L 2168914 intron CG15879 - chr3L_14_2165001 chr3L_2165001 RAL-492 1245 chr3L 2199792 2199818 chr3L 2199888 2199913 8 94 0.5 7.0 3.8 1.7 121 chr3L 2199792 intergenic not near genes chr3L 2199852 intergenic not near genes chr3L 2199913 intergenic not near genes chr3L_8_2195001 chr3L_2195001 RAL-492 1246 chr3L 2216563 2216599 chr3L 2216810 2216829 7 239 5.0 1.5 3.2 1.7 266 chr3L 2216563 intergenic not near genes chr3L 2216696 intergenic not near genes chr3L 2216829 intergenic not near genes chr3L_7_2215001 chr3L_2215001 RAL-492 1247 chr3L 2277956 2278009 chr3L 2278172 2278223 11 214 4.5 2.0 3.2 2.6 267 chr3L 2277956 3` UTR yellow-g2 + chr3L 2278090 intergenic yellow-g2 + chr3L 2278223 intergenic yellow-g2 + chr3L_11_2275001 chr3L_2275001 RAL-492 1248 chr3L 2282973 2283022 chr3L 2283069 2283118 9 96 7.0 5.0 6.0 1.3 145 chr3L 2282973 5` UTR MsR2 + chr3L 2283046 5` UTR MsR2 + chr3L 2283118 5` UTR MsR2 + chr3L_9_2280001 chr3L_2280001 RAL-492 1249 chr3L 2300725 2300761 chr3L 2300836 2300872 6 108 3.0 1.0 2.0 2.0 147 chr3L 2300725 3` UTR MsR2 + chr3L 2300798 3` UTR MsR2 + chr3L 2300872 3` UTR MsR2 + chr3L_6_2300001 chr3L_2300001 RAL-492 1250 chr3L 2307985 2308032 chr3L 2308111 2308158 15 125 7.5 3.5 5.5 2.3 173 chr3L 2307985 intergenic not near genes chr3L 2308072 intergenic not near genes chr3L 2308158 intergenic not near genes chr3L_15_2305001 chr3L_2305001 RAL-492 1251 chr3L 2310381 2310429 chr3L 2310474 2310525 24 94 3.5 3.5 3.5 5.3 144 chr3L 2310381 intergenic not near genes chr3L 2310453 intergenic not near genes chr3L 2310525 intergenic not near genes chr3L_24_2310001 chr3L_2310001 RAL-492 1252 chr3L 2315955 2315986 chr3L 2316051 2316082 7 94 5.5 3.0 4.2 1.3 127 chr3L 2315955 intergenic not near genes chr3L 2316018 intergenic not near genes chr3L 2316082 intergenic not near genes chr3L_7_2315001 chr3L_2315001 RAL-492 1253 chr3L 2355435 2355465 chr3L 2355643 2355673 6 208 25.0 14.0 19.5 0.3 238 chr3L 2355435 intergenic not near genes chr3L 2355554 intergenic not near genes chr3L 2355673 intergenic not near genes chr3L_6_2355001 chr3L_2355001 RAL-492 1254 chr3L 2359949 2359966 chr3L 2360239 2360256 6 290 35.5 21.0 28.2 0.2 307 chr3L 2359949 intergenic not near genes chr3L 2360102 intergenic CG13801 + chr3L 2360256 intergenic CG13801 + chr3L_6_2360001 chr3L_2360001 RAL-492 1255 chr3L 2359967 2359996 chr3L 2360237 2360241 4 272 27.5 20.0 23.8 0.2 274 chr3L 2359967 intergenic not near genes chr3L 2360104 intergenic CG13801 + chr3L 2360241 intergenic CG13801 + chr3L_4_2360001 chr3L_2360001 RAL-492 1256 chr3L 2373486 2373532 chr3L 2373580 2373628 15 93 3.0 2.0 2.5 4.3 142 chr3L 2373486 intron mRpL23 - chr3L 2373557 intron mRpL23 - chr3L 2373628 intron mRpL23 - chr3L_15_2370001 chr3L_2370001 RAL-492 1257 chr3L 2411321 2411341 chr3L 2411419 2411438 5 97 0.0 3.5 1.8 1.8 117 chr3L 2411321 intron CG45186 + chr3L 2411380 intron CG45186 + chr3L 2411438 intron CG45186 + chr3L_5_2410001 chr3L_2410001 RAL-492 1258 chr3L 2447486 2447535 chr3L 2456661 2456706 roo 16 9170 2.0 6.5 4.2 3.1 9220 chr3L 2447486 intron CG45186 + chr3L 2452096 intron CG45186 + chr3L 2456706 intron CG45186 + chr3L_16_2450001 chr3L_2450001 RAL-492 1259 chr3L 2524310 2524324 chr3L 2524493 2524505 4 182 2.0 2.0 2.0 1.3 195 chr3L 2524310 intron Spn - chr3L 2524408 intron Spn - chr3L 2524505 intron Spn - chr3L_4_2520001 chr3L_2520001 RAL-492 1260 chr3L 2534618 2534641 chr3L 2534720 2534744 6 100 0.0 11.0 5.5 0.9 126 chr3L 2534618 intron Spn - chr3L 2534681 intron Spn - chr3L 2534744 exon Spn - chr3L_6_2530001 chr3L_2530001 RAL-492 1261 chr3L 2581880 2581901 chr3L 2581994 2582015 8 113 3.5 3.0 3.2 1.9 135 chr3L 2581880 intron msn - chr3L 2581948 intron msn - chr3L 2582015 intron msn - chr3L_8_2580001 chr3L_2580001 RAL-492 1262 chr3L 2609664 2609682 chr3L 2609759 2609778 5 95 5.0 0.0 2.5 1.4 114 chr3L 2609664 intron Pxn - chr3L 2609721 intron Pxn - chr3L 2609778 intron Pxn - chr3L_5_2605001 chr3L_2605001 RAL-492 1263 chr3L 2683929 2683961 chr3L 2684020 2684053 10 95 7.5 1.5 4.5 1.8 124 chr3L 2683929 intron Fife - chr3L 2683991 intron Fife - chr3L 2684053 intron Fife - chr3L_10_2680001 chr3L_2680001 RAL-492 1264 chr3L 2766715 2766762 chr3L 2766832 2766879 13 115 2.0 4.5 3.2 3.1 164 chr3L 2766715 intergenic Mrtf -,Non2 + chr3L 2766797 intergenic Non2 +,Mrtf - chr3L 2766879 intergenic Non2 +,Mrtf - chr3L_13_2765001 chr3L_2765001 RAL-492 1265 chr3L 2795710 2795723 chr3L 2795852 2795866 7 143 6.0 2.0 4.0 1.4 156 chr3L 2795710 intron CG43444 - chr3L 2795788 intron CG43444 - chr3L 2795866 intron CG43444 - chr3L_7_2795001 chr3L_2795001 RAL-492 1266 chr3L 2812736 2812765 chr3L 2813096 2813126 14 359 3.5 4.0 3.8 2.9 390 chr3L 2812736 intron CG43444 - chr3L 2812931 intron CG43444 - chr3L 2813126 intron CG43444 - chr3L_14_2810001 chr3L_2810001 RAL-492 1267 chr3L 2927823 2927868 chr3L 2936117 2936165 Tirant 4 8296 2.0 1.5 1.8 1.4 8342 chr3L 2927823 intron Shab + chr3L 2931994 intron Shab + chr3L 2936165 intron Shab + chr3L_4_2930001 chr3L_2930001 RAL-492 1268 chr3L 2966702 2966720 chr3L 2974147 2974165 mdg1 5 7444 5.5 2.5 4.0 1.0 7463 chr3L 2966702 intergenic not near genes chr3L 2970434 intergenic not near genes chr3L 2974165 intergenic not near genes chr3L_5_2970001 chr3L_2970001 RAL-492 1269 chr3L 3102817 3102846 chr3L 3102902 3102937 11 84 4.0 2.5 3.2 2.6 120 chr3L 3102817 intron Cht7 - chr3L 3102877 intron Cht7 - chr3L 3102937 intron Cht7 - chr3L_11_3100001 chr3L_3100001 RAL-492 1270 chr3L 3114975 3115003 chr3L 3115079 3115091 6 100 8.0 2.0 5.0 1.0 116 chr3L 3114975 3` UTR prominin-like - chr3L 3115033 3` UTR prominin-like - chr3L 3115091 3` UTR prominin-like - chr3L_6_3115001 chr3L_3115001 RAL-492 1271 chr3L 3124046 3124098 chr3L 3124142 3124194 8 94 2.0 0.0 1.0 4.0 148 chr3L 3124046 intron prominin-like - chr3L 3124120 intron prominin-like - chr3L 3124194 intron prominin-like - chr3L_8_3120001 chr3L_3120001 RAL-492 1272 chr3L 3254067 3254115 chr3L 3254178 3254226 13 110 0.0 6.5 3.2 3.1 159 chr3L 3254067 5` UTR CR43626 + chr3L 3254146 5` UTR CR43626 + chr3L 3254226 5` UTR CR43626 + chr3L_13_3250001 chr3L_3250001 RAL-492 1273 chr3L 3257076 3257118 chr3L 3257273 3257315 15 192 1.5 7.0 4.2 2.9 239 chr3L 3257076 intergenic not near genes chr3L 3257196 intergenic not near genes chr3L 3257315 intergenic not near genes chr3L_15_3255001 chr3L_3255001 RAL-492 1274 chr3L 3259600 3259634 chr3L 3259715 3259738 9 106 3.5 8.0 5.8 1.3 138 chr3L 3259600 intron ckd + chr3L 3259669 intron ckd + chr3L 3259738 intron ckd + chr3L_9_3255001 chr3L_3255001 RAL-492 1275 chr3L 3259637 3259833 chr3L 3259712 3259953 12 109 0.5 8.0 4.2 2.3 316 chr3L 3259637 intron ckd + chr3L 3259795 intron ckd + chr3L 3259953 intron ckd + chr3L_12_3255001 chr3L_3255001 RAL-492 1276 chr3L 3269085 3269128 chr3L 3269192 3269216 7 105 0.0 2.5 1.2 3.2 131 chr3L 3269085 intergenic CG34265 + chr3L 3269150 intergenic CG34265 + chr3L 3269216 intergenic CG34265 + chr3L_7_3265001 chr3L_3265001 RAL-492 1277 chr3L 3281427 3281451 chr3L 3281941 3281967 Doc 5 515 7.0 12.0 9.5 0.5 540 chr3L 3281427 intron CG12017 + chr3L 3281697 intron CG12017 + chr3L 3281967 intron CG12017 + chr3L_5_3280001 chr3L_3280001 RAL-492 1278 chr3L 3281454 3281470 chr3L 3281933 3281972 Doc 11 502 4.5 9.5 7.0 1.4 518 chr3L 3281454 intron CG12017 + chr3L 3281713 intron CG12017 + chr3L 3281972 intron CG12017 + chr3L_11_3280001 chr3L_3280001 RAL-492 1279 chr3L 3294115 3294146 chr3L 3294226 3294257 10 110 4.0 1.0 2.5 2.9 142 chr3L 3294115 intron CG12009 + chr3L 3294186 intron CG12009 + chr3L 3294257 intron CG12009 + chr3L_10_3290001 chr3L_3290001 RAL-492 1280 chr3L 3310283 3310324 chr3L 3310370 3310423 16 91 4.0 4.0 4.0 3.2 140 chr3L 3310283 intron ZnT63C + chr3L 3310353 intron ZnT63C + chr3L 3310423 intron ZnT63C + chr3L_16_3310001 chr3L_3310001 RAL-492 1281 chr3L 3317512 3317561 chr3L 3317610 3317660 11 98 1.0 4.0 2.5 3.1 148 chr3L 3317512 intergenic Drsl5 + chr3L 3317586 intergenic PIG-C -,Drsl5 + chr3L 3317660 intergenic PIG-C - chr3L_11_3315001 chr3L_3315001 RAL-492 1282 chr3L 3450900 3450948 chr3L 3451009 3451056 11 102 4.5 1.5 3.0 2.8 156 chr3L 3450900 intron eIF5B - chr3L 3450978 intron eIF5B - chr3L 3451056 intron eIF5B - chr3L_11_3450001 chr3L_3450001 RAL-492 1283 chr3L 3475068 3475103 chr3L 3475532 3475556 jockey 10 462 4.0 6.0 5.0 1.7 488 chr3L 3475068 intron CG42324 + chr3L 3475312 intron CG42324 + chr3L 3475556 intron CG42324 + chr3L_10_3475001 chr3L_3475001 RAL-492 1284 chr3L 3484398 3484447 chr3L 3484495 3484544 17 93 2.5 3.5 3.0 4.2 146 chr3L 3484398 intron,intron CG42324 +,CG43074 - chr3L 3484471 intron,exon CG42324 +,CG43074 - chr3L 3484544 intron,intron CG42324 +,CG43074 - chr3L_17_3480001 chr3L_3480001 RAL-492 1285 chr3L 3494179 3494195 chr3L 3494275 3494292 9 94 3.0 5.5 4.2 1.7 113 chr3L 3494179 intron CG42324 + chr3L 3494236 intron CG42324 + chr3L 3494292 intron CG42324 + chr3L_9_3490001 chr3L_3490001 RAL-492 1286 chr3L 3565933 3565972 chr3L 3566014 3566065 10 84 4.5 5.0 4.8 1.7 132 chr3L 3565933 intron Eip63E + chr3L 3565999 intron Eip63E + chr3L 3566065 intron Eip63E + chr3L_10_3565001 chr3L_3565001 RAL-492 1287 chr3L 3601281 3601331 chr3L 3606612 3606652 copia 12 5328 2.5 3.5 3.0 3.0 5371 chr3L 3601281 intron Eip63E + chr3L 3603966 intron Eip63E + chr3L 3606652 intron Eip63E + chr3L_12_3600001 chr3L_3600001 RAL-492 1288 chr3L 3619387 3619421 chr3L 3619500 3619535 9 114 7.0 2.0 4.5 1.6 148 chr3L 3619387 intergenic not near genes chr3L 3619461 intergenic not near genes chr3L 3619535 intergenic not near genes chr3L_9_3615001 chr3L_3615001 RAL-492 1289 chr3L 3766725 3766741 chr3L 3766831 3766845 4 106 3.5 0.5 2.0 1.3 120 chr3L 3766725 intron CG32264 - chr3L 3766785 intron CG32264 - chr3L 3766845 intron CG32264 - chr3L_4_3765001 chr3L_3765001 RAL-492 1290 chr3L 3768944 3768974 chr3L 3769064 3769095 5 121 3.5 2.5 3.0 1.2 151 chr3L 3768944 intron CG32264 - chr3L 3769020 intron CG32264 - chr3L 3769095 exon CG32264 - chr3L_5_3765001 chr3L_3765001 RAL-492 1291 chr3L 3795571 3795626 chr3L 3795668 3795723 15 96 3.5 3.0 3.2 3.6 152 chr3L 3795571 intron CG32264 - chr3L 3795647 intron CG32264 - chr3L 3795723 intron CG32264 - chr3L_15_3795001 chr3L_3795001 RAL-492 1292 chr3L 3797222 3797259 chr3L 3797325 3797361 7 101 0.0 1.5 0.8 3.9 139 chr3L 3797222 intron CG32264 - chr3L 3797292 intron CG32264 - chr3L 3797361 intron CG32264 - chr3L_7_3795001 chr3L_3795001 RAL-492 1293 chr3L 3833717 3833752 chr3L 3833978 3834013 pogo 7 261 3.0 1.0 2.0 2.3 296 chr3L 3833717 intron enc + chr3L 3833865 intron enc + chr3L 3834013 intron enc + chr3L_7_3830001 chr3L_3830001 RAL-492 1294 chr3L 3845537 3845577 chr3L 3845651 3845688 13 106 6.0 2.5 4.2 2.5 151 chr3L 3845537 intergenic not near genes chr3L 3845612 intergenic not near genes chr3L 3845688 intergenic not near genes chr3L_13_3845001 chr3L_3845001 RAL-492 1295 chr3L 3877440 3877465 chr3L 3877583 3877607 6 143 0.0 4.0 2.0 2.0 167 chr3L 3877440 intergenic not near genes chr3L 3877524 intergenic not near genes chr3L 3877607 intergenic not near genes chr3L_6_3875001 chr3L_3875001 RAL-492 1296 chr3L 3936910 3936941 chr3L 3937041 3937048 5 125 5.0 5.0 5.0 0.8 138 chr3L 3936910 3` UTR CG10866 - chr3L 3936979 3` UTR CG10866 - chr3L 3937048 exon CG10866 - chr3L_5_3935001 chr3L_3935001 RAL-492 1297 chr3L 3936942 3936948 chr3L 3937040 3937081 4 120 4.5 5.0 4.8 0.7 139 chr3L 3936942 3` UTR CG10866 - chr3L 3937012 3` UTR CG10866 - chr3L 3937081 exon CG10866 - chr3L_4_3935001 chr3L_3935001 RAL-492 1298 chr3L 4099464 4099490 chr3L 4099565 4099591 5 101 0.0 2.0 1.0 2.5 127 chr3L 4099464 intron CG14995 - chr3L 4099528 intron CG14995 - chr3L 4099591 intron CG14995 - chr3L_5_4095001 chr3L_4095001 RAL-492 1299 chr3L 4170152 4170163 chr3L 4170250 4170261 5 98 0.5 5.0 2.8 1.3 109 chr3L 4170152 intergenic Ero1L + chr3L 4170206 intergenic Ero1L + chr3L 4170261 intergenic Ero1L + chr3L_5_4170001 chr3L_4170001 RAL-492 1300 chr3L 4189007 4189051 chr3L 4189148 4189163 10 137 3.5 2.5 3.0 2.5 156 chr3L 4189007 intron,intron CG18675 +,tipE + chr3L 4189085 intron,intron CG18675 +,tipE + chr3L 4189163 intron,intron CG18675 +,tipE + chr3L_10_4185001 chr3L_4185001 RAL-492 1301 chr3L 4195115 4195171 chr3L 4195239 4195293 16 121 2.5 6.5 4.5 2.9 178 chr3L 4195115 exon CG43367 + chr3L 4195204 intron CG43367 + chr3L 4195293 intron CG43367 + chr3L_16_4195001 chr3L_4195001 RAL-492 1302 chr3L 4210892 4210940 chr3L 4210992 4211033 6 98 0.5 2.5 1.5 2.4 141 chr3L 4210892 intron,3` UTR CG43367 +,Cpr64Ab - chr3L 4210962 intron,3` UTR CG43367 +,Cpr64Ab - chr3L 4211033 intron,exon CG43367 +,Cpr64Ab - chr3L_6_4210001 chr3L_4210001 RAL-492 1303 chr3L 4232313 4232328 chr3L 4232372 4232392 7 62 5.0 5.0 5.0 1.2 79 chr3L 4232313 intron ImpL2 - chr3L 4232352 intron ImpL2 - chr3L 4232392 intron ImpL2 - chr3L_7_4230001 chr3L_4230001 RAL-492 1304 chr3L 4328740 4328760 chr3L 4336255 4336277 412 4 7516 4.0 1.5 2.8 1.1 7537 chr3L 4328740 intron Cip4 - chr3L 4332508 intron Cip4 - chr3L 4336277 exon Cip4 - chr3L_4_4330001 chr3L_4330001 RAL-492 1305 chr3L 4477578 4477608 chr3L 4478134 4478184 15 561 26.5 32.5 29.5 0.5 606 chr3L 4477578 intergenic not near genes chr3L 4477881 intergenic not near genes chr3L 4478184 intergenic not near genes chr3L_15_4475001 chr3L_4475001 RAL-492 1306 chr3L 4503892 4503906 chr3L 4503988 4504003 4 97 2.5 0.0 1.2 1.8 111 chr3L 4503892 intron NT1 - chr3L 4503948 intron NT1 - chr3L 4504003 intron NT1 - chr3L_4_4500001 chr3L_4500001 RAL-492 1307 chr3L 4519416 4519445 chr3L 4519509 4519542 7 96 6.5 0.5 3.5 1.6 126 chr3L 4519416 intron Tie - chr3L 4519479 intron Tie - chr3L 4519542 intron Tie - chr3L_7_4515001 chr3L_4515001 RAL-492 1308 chr3L 4572409 4572450 chr3L 4572592 4572633 15 183 2.0 3.0 2.5 4.3 224 chr3L 4572409 intron CG42540 + chr3L 4572521 intron CG42540 + chr3L 4572633 intron CG42540 + chr3L_15_4570001 chr3L_4570001 RAL-492 1309 chr3L 4573714 4573754 chr3L 4573820 4573860 9 105 3.5 2.5 3.0 2.2 146 chr3L 4573714 intron CG42540 + chr3L 4573787 intron CG42540 + chr3L 4573860 intron CG42540 + chr3L_9_4570001 chr3L_4570001 RAL-492 1310 chr3L 4632334 4632377 chr3L 4633037 4633077 9 702 3.0 0.0 1.5 3.6 743 chr3L 4632334 intron axo - chr3L 4632706 intron axo - chr3L 4633077 intron axo - chr3L_9_4630001 chr3L_4630001 RAL-492 1311 chr3L 4775441 4775470 chr3L 4775541 4775570 6 100 4.0 3.0 3.5 1.3 129 chr3L 4775441 intron RhoGEF64C + chr3L 4775506 intron RhoGEF64C + chr3L 4775570 intron RhoGEF64C + chr3L_6_4775001 chr3L_4775001 RAL-492 1312 chr3L 4782091 4782097 chr3L 4782211 4782214 5 118 9.0 5.0 7.0 0.6 123 chr3L 4782091 intron RhoGEF64C + chr3L 4782152 intron RhoGEF64C + chr3L 4782214 intron RhoGEF64C + chr3L_5_4780001 chr3L_4780001 RAL-492 1313 chr3L 4782098 4782124 chr3L 4782208 4782242 7 111 3.0 4.0 3.5 1.6 144 chr3L 4782098 intron RhoGEF64C + chr3L 4782170 intron RhoGEF64C + chr3L 4782242 intron RhoGEF64C + chr3L_7_4780001 chr3L_4780001 RAL-492 1314 chr3L 4858311 4858331 chr3L 4858394 4858441 9 98 6.5 5.5 6.0 1.3 130 chr3L 4858311 intergenic not near genes chr3L 4858376 intergenic not near genes chr3L 4858441 intergenic not near genes chr3L_9_4855001 chr3L_4855001 RAL-492 1315 chr3L 4901116 4901136 chr3L 4907325 4907345 diver 7 6208 2.0 4.5 3.2 1.7 6229 chr3L 4901116 intergenic CG13704 + chr3L 4904230 intergenic not near genes chr3L 4907345 intergenic not near genes chr3L_7_4900001 chr3L_4900001 RAL-492 1316 chr3L 4958400 4958445 chr3L 4958504 4958534 6 94 5.0 4.0 4.5 1.1 134 chr3L 4958400 intron Con - chr3L 4958467 intron Con - chr3L 4958534 intron Con - chr3L_6_4955001 chr3L_4955001 RAL-492 1317 chr3L 5034141 5034186 chr3L 5043312 5043358 roo 8 9170 0.5 2.0 1.2 3.6 9217 chr3L 5034141 intron Con - chr3L 5038750 intron Con - chr3L 5043358 intron Con - chr3L_8_5035001 chr3L_5035001 RAL-492 1318 chr3L 5045439 5045477 chr3L 5050240 5050278 Doc 9 4801 3.5 4.5 4.0 1.8 4839 chr3L 5045439 intron Con - chr3L 5047858 intron Con - chr3L 5050278 intron Con - chr3L_9_5045001 chr3L_5045001 RAL-492 1319 chr3L 5051816 5051850 chr3L 5052723 5052771 12 919 4.5 3.5 4.0 2.4 955 chr3L 5051816 intron Con - chr3L 5052294 intron Con - chr3L 5052771 intron Con - chr3L_12_5050001 chr3L_5050001 RAL-492 1320 chr3L 5081852 5081884 chr3L 5081938 5081981 6 96 4.0 3.0 3.5 1.3 129 chr3L 5081852 intergenic not near genes chr3L 5081916 intergenic not near genes chr3L 5081981 intergenic not near genes chr3L_6_5080001 chr3L_5080001 RAL-492 1321 chr3L 5101193 5101231 chr3L 5101292 5101331 12 100 1.5 5.5 3.5 2.7 138 chr3L 5101193 intergenic not near genes chr3L 5101262 intergenic not near genes chr3L 5101331 intergenic not near genes chr3L_12_5100001 chr3L_5100001 RAL-492 1322 chr3L 5104471 5104508 chr3L 5124625 5124662 12 20154 1.5 2.5 2.0 4.0 20191 chr3L 5104471 intergenic not near genes chr3L 5114566 intergenic not near genes chr3L 5124662 intergenic not near genes chr3L_12_5110001 chr3L_5110001 RAL-492 1323 chr3L 5164617 5164665 chr3L 5164713 5164760 7 95 3.5 2.0 2.8 1.8 143 chr3L 5164617 intron shep - chr3L 5164688 intron shep - chr3L 5164760 intron shep - chr3L_7_5160001 chr3L_5160001 RAL-492 1324 chr3L 5213253 5213267 chr3L 5213371 5213384 4 116 0.0 4.0 2.0 1.3 131 chr3L 5213253 intron shep - chr3L 5213318 intron shep - chr3L 5213384 intron shep - chr3L_4_5210001 chr3L_5210001 RAL-492 1325 chr3L 5220815 5220846 chr3L 5220930 5220961 12 115 6.0 2.0 4.0 2.4 146 chr3L 5220815 intron shep - chr3L 5220888 intron shep - chr3L 5220961 intron shep - chr3L_12_5220001 chr3L_5220001 RAL-492 1326 chr3L 5251848 5251866 chr3L 5251947 5251965 9 99 0.5 5.0 2.8 2.4 117 chr3L 5251848 intron shep - chr3L 5251906 intron shep - chr3L 5251965 intron shep - chr3L_9_5250001 chr3L_5250001 RAL-492 1327 chr3L 5257620 5257662 chr3L 5257927 5257970 9 307 4.0 7.5 5.8 1.3 350 chr3L 5257620 intron shep - chr3L 5257795 intron shep - chr3L 5257970 intron shep - chr3L_9_5255001 chr3L_5255001 RAL-492 1328 chr3L 5384296 5384324 chr3L 5384394 5384416 7 93 4.0 5.0 4.5 1.3 120 chr3L 5384296 intergenic not near genes chr3L 5384356 intergenic not near genes chr3L 5384416 intergenic not near genes chr3L_7_5380001 chr3L_5380001 RAL-492 1329 chr3L 5384325 5384342 chr3L 5384388 5384416 8 76 1.5 5.0 3.2 1.9 91 chr3L 5384325 intergenic not near genes chr3L 5384370 intergenic not near genes chr3L 5384416 intergenic not near genes chr3L_8_5380001 chr3L_5380001 RAL-492 1330 chr3L 5388183 5388233 chr3L 5388527 5388577 16 337 2.5 4.5 3.5 3.6 394 chr3L 5388183 intergenic not near genes chr3L 5388380 intergenic not near genes chr3L 5388577 intergenic not near genes chr3L_16_5385001 chr3L_5385001 RAL-492 1331 chr3L 5449518 5449558 chr3L 5449617 5449657 9 96 3.5 3.0 3.2 2.1 139 chr3L 5449518 intergenic not near genes chr3L 5449588 intergenic not near genes chr3L 5449657 intergenic not near genes chr3L_9_5445001 chr3L_5445001 RAL-492 1332 chr3L 5483155 5483253 chr3L 5483066 5483322 4 86 34.5 4.5 19.5 0.2 167 chr3L 5483155 exon CG4835 + chr3L 5483238 exon CG4835 + chr3L 5483322 exon CG4835 + chr3L_4_5480001 chr3L_5480001 RAL-492 1333 chr3L 5484759 5484794 chr3L 5485109 5485138 11 351 4.5 7.5 6.0 1.6 379 chr3L 5484759 intergenic not near genes chr3L 5484948 intergenic not near genes chr3L 5485138 intergenic not near genes chr3L_11_5480001 chr3L_5480001 RAL-492 1334 chr3L 5498368 5498426 chr3L 5498477 5498503 4 95 0.0 3.0 1.5 1.6 135 chr3L 5498368 exon blanks - chr3L 5498436 exon blanks - chr3L 5498503 exon blanks - chr3L_4_5495001 chr3L_5495001 RAL-492 1335 chr3L 5504541 5504569 chr3L 5504639 5504667 8 94 6.0 0.0 3.0 2.0 126 chr3L 5504541 intron CG34342 - chr3L 5504604 intron CG34342 - chr3L 5504667 intron CG34342 - chr3L_8_5500001 chr3L_5500001 RAL-492 1336 chr3L 5526947 5526989 chr3L 5527053 5527110 7 108 5.5 0.0 2.8 1.8 163 chr3L 5526947 intron Lkr - chr3L 5527028 intron Lkr - chr3L 5527110 intron Lkr - chr3L_7_5525001 chr3L_5525001 RAL-492 1337 chr3L 5531172 5531210 chr3L 5531273 5531304 11 99 5.0 4.5 4.8 1.9 132 chr3L 5531172 intergenic not near genes chr3L 5531238 intergenic not near genes chr3L 5531304 intergenic not near genes chr3L_11_5530001 chr3L_5530001 RAL-492 1338 chr3L 5613478 5613492 chr3L 5613625 5613639 4 147 1.5 2.0 1.8 1.4 161 chr3L 5613478 intergenic not near genes chr3L 5613558 intergenic not near genes chr3L 5613639 intergenic not near genes chr3L_4_5610001 chr3L_5610001 RAL-492 1339 chr3L 5910011 5910062 chr3L 5910272 5910323 pogo 13 261 3.5 4.5 4.0 2.6 312 chr3L 5910011 intron CG13288 + chr3L 5910167 intron CG13288 + chr3L 5910323 intron CG13288 + chr3L_13_5910001 chr3L_5910001 RAL-492 1340 chr3L 5926307 5926346 chr3L 5926502 5926545 BS 13 204 2.5 5.5 4.0 2.6 238 chr3L 5926307 intron Vap-33B + chr3L 5926426 intron Vap-33B + chr3L 5926545 intron Vap-33B + chr3L_13_5925001 chr3L_5925001 RAL-492 1341 chr3L 6001664 6001697 chr3L 6004384 6004417 jockey 5 2720 8.5 1.5 5.0 0.8 2753 chr3L 6001664 intron PVRAP + chr3L 6003040 intron PVRAP + chr3L 6004417 intron PVRAP + chr3L_5_6000001 chr3L_6000001 RAL-492 1342 chr3L 6022221 6022272 chr3L 6022324 6022376 20 95 2.0 1.0 1.5 8.0 155 chr3L 6022221 intron PVRAP + chr3L 6022298 intron PVRAP + chr3L 6022376 intron PVRAP + chr3L_20_6020001 chr3L_6020001 RAL-492 1343 chr3L 6040288 6040293 chr3L 6040388 6040393 5 100 4.5 0.0 2.2 1.6 105 chr3L 6040288 intergenic Jon65Aiv + chr3L 6040340 intergenic Jon65Aiv + chr3L 6040393 intergenic Jon65Aiv + chr3L_5_6040001 chr3L_6040001 RAL-492 1344 chr3L 6040354 6040389 chr3L 6042730 6042765 Doc 6 2376 0.5 8.0 4.2 1.2 2411 chr3L 6040354 intergenic Jon65Aiv + chr3L 6041560 intergenic not near genes chr3L 6042765 intergenic not near genes chr3L_6_6040001 chr3L_6040001 RAL-492 1345 chr3L 6052125 6052151 chr3L 6052231 6052257 7 106 0.0 6.0 3.0 1.8 132 chr3L 6052125 intergenic Jon65Aii +,Jon65Aiii + chr3L 6052191 intergenic Jon65Aii + chr3L 6052257 intergenic Jon65Aii + chr3L_7_6050001 chr3L_6050001 RAL-492 1346 chr3L 6052596 6052634 chr3L 6052743 6052755 7 138 5.0 5.0 5.0 1.2 159 chr3L 6052596 exon Jon65Aii + chr3L 6052676 intron Jon65Aii + chr3L 6052755 exon Jon65Aii + chr3L_7_6050001 chr3L_6050001 RAL-492 1347 chr3L 6085323 6085357 chr3L 6085461 6085497 9 138 2.5 2.0 2.2 2.8 174 chr3L 6085323 intron CG13293 + chr3L 6085410 intron CG13293 + chr3L 6085497 intron CG13293 + chr3L_9_6085001 chr3L_6085001 RAL-492 1348 chr3L 6116677 6116724 chr3L 6116781 6116828 11 104 3.5 4.0 3.8 2.3 151 chr3L 6116677 intron Ets65A + chr3L 6116752 intron Ets65A + chr3L 6116828 intron Ets65A + chr3L_11_6115001 chr3L_6115001 RAL-492 1349 chr3L 6119124 6119156 chr3L 6119221 6119252 8 96 3.5 0.0 1.8 2.9 128 chr3L 6119124 exon Ets65A + chr3L 6119188 intron Ets65A + chr3L 6119252 intron Ets65A + chr3L_8_6115001 chr3L_6115001 RAL-492 1350 chr3L 6155700 6155711 chr3L 6155806 6155815 5 105 3.0 0.0 1.5 2.0 115 chr3L 6155700 intergenic CR45421 - chr3L 6155758 intergenic not near genes chr3L 6155815 intergenic not near genes chr3L_5_6155001 chr3L_6155001 RAL-492 1351 chr3L 6162351 6162375 chr3L 6162433 6162456 4 81 1.5 0.5 1.0 2.0 105 chr3L 6162351 intergenic CR45744 - chr3L 6162404 intergenic CR45744 - chr3L 6162456 intergenic CR45744 - chr3L_4_6160001 chr3L_6160001 RAL-492 1352 chr3L 6185587 6185632 chr3L 6185685 6185730 14 96 5.5 6.5 6.0 2.0 143 chr3L 6185587 exon CG43293 + chr3L 6185658 intron CG43293 + chr3L 6185730 exon CG43293 + chr3L_14_6185001 chr3L_6185001 RAL-492 1353 chr3L 6220897 6220943 chr3L 6230069 6230115 roo 18 9171 3.5 7.0 5.2 2.9 9218 chr3L 6220897 5` UTR pncr008:3L + chr3L 6225506 intergenic not near genes chr3L 6230115 intergenic not near genes chr3L_18_6225001 chr3L_6225001 RAL-492 1354 chr3L 6334997 6335040 chr3L 6335485 6335530 297 7 482 3.5 6.5 5.0 1.2 533 chr3L 6334997 intron CG13300 - chr3L 6335264 intron CG13300 - chr3L 6335530 intron CG13300 - chr3L_7_6335001 chr3L_6335001 RAL-492 1355 chr3L 6530254 6530301 chr3L 6530354 6530399 8 97 2.5 7.0 4.8 1.4 145 chr3L 6530254 intron sfl + chr3L 6530326 intron sfl + chr3L 6530399 intron sfl + chr3L_8_6530001 chr3L_6530001 RAL-492 1356 chr3L 6620599 6620606 chr3L 6621057 6621066 Rt1c 5 459 6.0 17.0 11.5 0.4 467 chr3L 6620599 intergenic not near genes chr3L 6620832 intergenic not near genes chr3L 6621066 intergenic not near genes chr3L_5_6620001 chr3L_6620001 RAL-492 1357 chr3L 6623478 6623502 chr3L 6623576 6623618 8 102 4.0 1.5 2.8 2.1 140 chr3L 6623478 intergenic not near genes chr3L 6623548 intergenic GluRIA + chr3L 6623618 intergenic GluRIA + chr3L_8_6620001 chr3L_6620001 RAL-492 1358 chr3L 6655569 6655569 chr3L 18417066 18417066 4 11761497 15.5 22.5 19.0 0.2 11761497 chr3L 6655569 intergenic not near genes chr3L 12536318 exon CG4069 - chr3L 18417066 intergenic not near genes chr3L_4_12535001 chr3L_12535001 RAL-492 1359 chr3L 6704073 6704095 chr3L 6704178 6704200 6 101 1.0 4.0 2.5 1.7 127 chr3L 6704073 intergenic not near genes chr3L 6704136 intergenic not near genes chr3L 6704200 intergenic not near genes chr3L_6_6700001 chr3L_6700001 RAL-492 1360 chr3L 6781102 6781148 chr3L 6783135 6783181 Doc 12 2030 1.5 4.5 3.0 3.0 2079 chr3L 6781102 intergenic not near genes chr3L 6782142 intergenic not near genes chr3L 6783181 intergenic not near genes chr3L_12_6780001 chr3L_6780001 RAL-492 1361 chr3L 6786880 6786925 chr3L 6786985 6787021 16 111 4.0 4.5 4.2 3.1 141 chr3L 6786880 3` UTR CR45759 - chr3L 6786950 3` UTR CR45759 - chr3L 6787021 3` UTR CR45759 - chr3L_16_6785001 chr3L_6785001 RAL-492 1362 chr3L 6844350 6844389 chr3L 6844516 6844555 6 166 2.0 4.0 3.0 1.5 205 chr3L 6844350 intergenic not near genes chr3L 6844452 intergenic not near genes chr3L 6844555 intergenic not near genes chr3L_6_6840001 chr3L_6840001 RAL-492 1363 chr3L 6855921 6855947 chr3L 6860726 6860751 Doc 8 4804 4.5 8.5 6.5 1.1 4830 chr3L 6855921 intergenic not near genes chr3L 6858336 intergenic not near genes chr3L 6860751 intergenic not near genes chr3L_8_6855001 chr3L_6855001 RAL-492 1364 chr3L 6887499 6887540 chr3L 6895012 6895053 roo 5 7513 3.0 0.0 1.5 2.0 7554 chr3L 6887499 intergenic not near genes chr3L 6891276 intergenic not near genes chr3L 6895053 intergenic not near genes chr3L_5_6890001 chr3L_6890001 RAL-492 1365 chr3L 6934316 6934360 chr3L 6934447 6934491 4 131 3.0 0.0 1.5 1.6 175 chr3L 6934316 exon CG14820 + chr3L 6934404 intron CG14820 + chr3L 6934491 exon CG14820 + chr3L_4_6930001 chr3L_6930001 RAL-492 1366 chr3L 6980676 6980708 chr3L 6980786 6980818 5 110 3.0 1.0 2.0 1.7 142 chr3L 6980676 intergenic not near genes chr3L 6980747 intergenic not near genes chr3L 6980818 intergenic not near genes chr3L_5_6980001 chr3L_6980001 RAL-492 1367 chr3L 7013441 7013471 chr3L 7013549 7013594 5 117 2.0 0.0 1.0 2.5 153 chr3L 7013441 intron Mp + chr3L 7013518 intron Mp + chr3L 7013594 intron Mp + chr3L_5_7010001 chr3L_7010001 RAL-492 1368 chr3L 7130803 7130848 chr3L 7130901 7130949 15 101 5.5 3.5 4.5 2.7 146 chr3L 7130803 intergenic CG8628 + chr3L 7130876 5` UTR CG8628 + chr3L 7130949 intron CG8628 + chr3L_15_7130001 chr3L_7130001 RAL-492 1369 chr3L 7175808 7175842 chr3L 7175914 7175940 7 103 6.5 8.0 7.2 0.9 132 chr3L 7175808 intron Dscam2 - chr3L 7175874 intron Dscam2 - chr3L 7175940 intron Dscam2 - chr3L_7_7175001 chr3L_7175001 RAL-492 1370 chr3L 7244947 7244963 chr3L 7245021 7245062 5 87 3.5 3.0 3.2 1.2 115 chr3L 7244947 exon mei-P22 + chr3L 7245004 exon mei-P22 + chr3L 7245062 exon mei-P22 + chr3L_5_7240001 chr3L_7240001 RAL-492 1371 chr3L 7255428 7255471 chr3L 7255547 7255590 13 118 2.0 4.0 3.0 3.2 162 chr3L 7255428 intron CG14830 - chr3L 7255509 intron CG14830 - chr3L 7255590 intron CG14830 - chr3L_13_7255001 chr3L_7255001 RAL-492 1372 chr3L 7276167 7276171 chr3L 7276239 7276268 5 89 2.5 1.5 2.0 1.7 101 chr3L 7276167 intron unc-13-4A - chr3L 7276218 intron unc-13-4A - chr3L 7276268 intron unc-13-4A - chr3L_5_7275001 chr3L_7275001 RAL-492 1373 chr3L 7288385 7288410 chr3L 7288486 7288515 7 104 0.0 7.5 3.8 1.5 130 chr3L 7288385 intron unc-13-4A - chr3L 7288450 intron unc-13-4A - chr3L 7288515 intron unc-13-4A - chr3L_7_7285001 chr3L_7285001 RAL-492 1374 chr3L 7358282 7358325 chr3L 7359578 7359594 16 1293 27.0 21.0 24.0 0.6 1312 chr3L 7358282 exon pst - chr3L 7358938 exon pst - chr3L 7359594 exon pst - chr3L_16_7355001 chr3L_7355001 RAL-492 1375 chr3L 7371160 7371211 chr3L 7371263 7371315 9 100 0.5 1.5 1.0 4.5 155 chr3L 7371160 intron akirin + chr3L 7371238 intron akirin + chr3L 7371315 intron akirin + chr3L_9_7370001 chr3L_7370001 RAL-492 1376 chr3L 7375907 7375954 chr3L 7375999 7376050 13 92 6.0 5.0 5.5 2.0 143 chr3L 7375907 exon SMSr - chr3L 7375978 intron SMSr - chr3L 7376050 intron SMSr - chr3L_13_7375001 chr3L_7375001 RAL-492 1377 chr3L 7377306 7377348 chr3L 7380431 7380473 297 9 3124 1.5 3.5 2.5 2.6 3167 chr3L 7377306 intron SMSr - chr3L 7378890 intron SMSr - chr3L 7380473 intron SMSr - chr3L_9_7375001 chr3L_7375001 RAL-492 1378 chr3L 7444000 7444012 chr3L 7444118 7444130 4 118 8.0 0.0 4.0 0.8 130 chr3L 7444000 intron CG42458 + chr3L 7444065 intron CG42458 + chr3L 7444130 intron CG42458 + chr3L_4_7440001 chr3L_7440001 RAL-492 1379 chr3L 7498749 7498771 chr3L 7503546 7503567 F-element 5 4796 5.5 3.5 4.5 0.9 4818 chr3L 7498749 5` UTR CG8539 - chr3L 7501158 intergenic not near genes chr3L 7503567 intergenic not near genes chr3L_5_7500001 chr3L_7500001 RAL-492 1380 chr3L 7508671 7508704 chr3L 7508775 7508795 6 101 1.0 2.5 1.8 2.1 124 chr3L 7508671 intergenic not near genes chr3L 7508733 intergenic not near genes chr3L 7508795 intergenic not near genes chr3L_6_7505001 chr3L_7505001 RAL-492 1381 chr3L 7591138 7591181 chr3L 7591235 7591246 8 83 2.0 4.5 3.2 1.9 108 chr3L 7591138 intergenic CG7716 - chr3L 7591192 intergenic CG7716 - chr3L 7591246 intergenic CG7716 - chr3L_8_7590001 chr3L_7590001 RAL-492 1382 chr3L 7731959 7731998 chr3L 7732067 7732087 6 102 5.0 6.0 5.5 0.9 128 chr3L 7731959 intron,exon CG32373 +,CG8492 - chr3L 7732023 intron,5` UTR CG32373 +,CG8492 - chr3L 7732087 intron,5` UTR CG32373 +,CG8492 - chr3L_6_7730001 chr3L_7730001 RAL-492 1383 chr3L 7749470 7749471 chr3L 11777678 11777678 6 4028207 12.5 19.5 16.0 0.4 4028208 chr3L 7749470 intron,3` UTR CG32373 +,CG13685 + chr3L 9763574 5` UTR CG8177 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_6_9760001 chr3L_9760001 RAL-492 1384 chr3L 7791992 7792003 chr3L 7792113 7792123 6 121 7.0 4.5 5.8 0.9 131 chr3L 7791992 intron CG32369 - chr3L 7792058 intron CG32369 - chr3L 7792123 intron CG32369 - chr3L_6_7790001 chr3L_7790001 RAL-492 1385 chr3L 7792015 7792043 chr3L 7792117 7792164 12 114 2.5 5.5 4.0 2.4 149 chr3L 7792015 intron CG32369 - chr3L 7792090 intron CG32369 - chr3L 7792164 intron CG32369 - chr3L_12_7790001 chr3L_7790001 RAL-492 1386 chr3L 7793705 7793731 chr3L 7800774 7800803 297 6 7071 4.5 7.5 6.0 0.9 7098 chr3L 7793705 intron CG32369 - chr3L 7797254 intron CG32369 - chr3L 7800803 intron CG32369 - chr3L_6_7795001 chr3L_7795001 RAL-492 1387 chr3L 7829533 7829555 chr3L 7829635 7829657 5 98 5.5 7.5 6.5 0.7 124 chr3L 7829533 intron Pdp1 - chr3L 7829595 intron Pdp1 - chr3L 7829657 intron Pdp1 - chr3L_5_7825001 chr3L_7825001 RAL-492 1388 chr3L 7829558 7829576 chr3L 7829631 7829661 5 93 2.0 6.0 4.0 1.0 103 chr3L 7829558 intron Pdp1 - chr3L 7829610 intron Pdp1 - chr3L 7829661 intron Pdp1 - chr3L_5_7825001 chr3L_7825001 RAL-492 1389 chr3L 7886493 7886540 chr3L 7889031 7889078 Stalker4 13 2536 1.0 3.0 2.0 4.3 2585 chr3L 7886493 intron CG32365 + chr3L 7887786 intron CG32365 + chr3L 7889078 intron CG32365 + chr3L_13_7885001 chr3L_7885001 RAL-492 1390 chr3L 7916824 7916858 chr3L 7926013 7926034 roo 7 9189 2.0 3.0 2.5 2.0 9210 chr3L 7916824 3` UTR syd - chr3L 7921429 intron syd - chr3L 7926034 3` UTR syd - chr3L_7_7920001 chr3L_7920001 RAL-492 1391 chr3L 7985364 7985389 chr3L 7987703 7987737 NOF 8 2344 7.5 5.0 6.2 1.1 2373 chr3L 7985364 intron nmo + chr3L 7986550 intron nmo + chr3L 7987737 intron nmo + chr3L_8_7985001 chr3L_7985001 RAL-492 1392 chr3L 7998882 7998901 chr3L 7998984 7999004 9 101 0.0 6.5 3.2 2.1 122 chr3L 7998882 intron nmo + chr3L 7998943 intron nmo + chr3L 7999004 intron nmo + chr3L_9_7995001 chr3L_7995001 RAL-492 1393 chr3L 8041546 8041564 chr3L 8041644 8041661 4 95 9.5 7.5 8.5 0.4 115 chr3L 8041546 intron nmo + chr3L 8041604 intron nmo + chr3L 8041661 intron nmo + chr3L_4_8040001 chr3L_8040001 RAL-492 1394 chr3L 8046286 8046327 chr3L 8046386 8046428 7 99 1.5 4.5 3.0 1.8 142 chr3L 8046286 intron nmo + chr3L 8046357 intron nmo + chr3L 8046428 intron nmo + chr3L_7_8045001 chr3L_8045001 RAL-492 1395 chr3L 8158173 8158342 chr3L 8158274 8158456 10 102 0.0 0.0 0.0 10.0 283 chr3L 8158173 intron CG42445 - chr3L 8158314 intron CG42445 - chr3L 8158456 intron CG42445 - chr3L_10_8155001 chr3L_8155001 RAL-492 1396 chr3L 8165946 8165989 chr3L 8166050 8166093 6 104 2.0 2.0 2.0 2.0 147 chr3L 8165946 intergenic CG13675 - chr3L 8166020 intergenic not near genes chr3L 8166093 intergenic not near genes chr3L_6_8165001 chr3L_8165001 RAL-492 1397 chr3L 8233573 8233586 chr3L 8238855 8238867 Rt1a 7 5281 3.5 13.0 8.2 0.8 5294 chr3L 8233573 intron CG7213 - chr3L 8236220 intron CG7213 - chr3L 8238867 intron,intron CG7213 -,Dscam4 + chr3L_7_8235001 chr3L_8235001 RAL-492 1398 chr3L 8274820 8274830 chr3L 8274952 8274958 4 132 5.0 0.0 2.5 1.1 138 chr3L 8274820 intron Dscam4 + chr3L 8274889 intron Dscam4 + chr3L 8274958 intron Dscam4 + chr3L_4_8270001 chr3L_8270001 RAL-492 1399 chr3L 8295773 8295795 chr3L 8295951 8295971 7 177 7.0 4.0 5.5 1.1 198 chr3L 8295773 intergenic CG7201 - chr3L 8295872 intergenic not near genes chr3L 8295971 intergenic not near genes chr3L_7_8295001 chr3L_8295001 RAL-492 1400 chr3L 8295800 8295824 chr3L 8295948 8296002 5 171 3.5 3.5 3.5 1.1 202 chr3L 8295800 intergenic CG7201 - chr3L 8295901 intergenic not near genes chr3L 8296002 intergenic not near genes chr3L_5_8295001 chr3L_8295001 RAL-492 1401 chr3L 8314798 8314823 chr3L 8314899 8314920 9 101 1.5 5.0 3.2 2.1 122 chr3L 8314798 intron CG7185 - chr3L 8314859 intron CG7185 - chr3L 8314920 intron CG7185 - chr3L_9_8310001 chr3L_8310001 RAL-492 1402 chr3L 8392735 8392780 chr3L 8392841 8392869 9 102 2.5 3.5 3.0 2.2 134 chr3L 8392735 intergenic Jon66Cii -,Jon66Ci + chr3L 8392802 intergenic Jon66Cii -,Jon66Ci + chr3L 8392869 exon Jon66Cii - chr3L_9_8390001 chr3L_8390001 RAL-492 1403 chr3L 8395813 8395863 chr3L 8395929 8395932 9 106 2.5 2.5 2.5 2.6 119 chr3L 8395813 intergenic CG7120 + chr3L 8395872 intergenic CG7120 + chr3L 8395932 intergenic CG7120 + chr3L_9_8395001 chr3L_8395001 RAL-492 1404 chr3L 8442900 8442906 chr3L 8442996 8443002 4 96 0.0 3.0 1.5 1.6 102 chr3L 8442900 intergenic CG6983 - chr3L 8442951 intergenic CG6983 - chr3L 8443002 intergenic CG6983 - chr3L_4_8440001 chr3L_8440001 RAL-492 1405 chr3L 8456472 8456486 chr3L 8456568 8456585 6 101 11.0 18.0 14.5 0.4 113 chr3L 8456472 intron Gug + chr3L 8456528 intron Gug + chr3L 8456585 intron Gug + chr3L_6_8455001 chr3L_8455001 RAL-492 1406 chr3L 8498297 8498319 chr3L 8505781 8505804 blood 6 7486 2.5 3.5 3.0 1.5 7507 chr3L 8498297 intron CG43163 - chr3L 8502050 intron CG43163 - chr3L 8505804 intron CG43163 - chr3L_6_8500001 chr3L_8500001 RAL-492 1407 chr3L 8690580 8690629 chr3L 8690846 8690894 24 260 5.0 5.5 5.2 3.9 314 chr3L 8690580 intergenic not near genes chr3L 8690737 intergenic not near genes chr3L 8690894 intergenic not near genes chr3L_24_8690001 chr3L_8690001 RAL-492 1408 chr3L 8755466 8755517 chr3L 8755573 8755627 19 106 2.0 4.0 3.0 4.8 161 chr3L 8755466 intron Fhos + chr3L 8755546 intron Fhos + chr3L 8755627 intron Fhos + chr3L_19_8755001 chr3L_8755001 RAL-492 1409 chr3L 8791258 8791305 chr3L 8796698 8796744 I-element 8 5438 7.5 0.0 3.8 1.7 5486 chr3L 8791258 exon Fhos + chr3L 8794001 intron Fhos + chr3L 8796744 intron Fhos + chr3L_8_8790001 chr3L_8790001 RAL-492 1410 chr3L 8839724 8839748 chr3L 8839824 8839848 5 99 5.0 3.5 4.2 1.0 124 chr3L 8839724 intron dally + chr3L 8839786 intron dally + chr3L 8839848 intron dally + chr3L_5_8835001 chr3L_8835001 RAL-492 1411 chr3L 8846180 8846196 chr3L 8846280 8846297 8 101 2.5 0.5 1.5 3.2 117 chr3L 8846180 intron dally + chr3L 8846238 intron dally + chr3L 8846297 intron dally + chr3L_8_8845001 chr3L_8845001 RAL-492 1412 chr3L 8849192 8849243 chr3L 8849290 8849319 11 93 4.5 1.0 2.8 2.9 127 chr3L 8849192 intron dally + chr3L 8849256 intron dally + chr3L 8849319 intron dally + chr3L_11_8845001 chr3L_8845001 RAL-492 1413 chr3L 8859319 8859346 chr3L 8859406 8859432 6 85 9.0 4.0 6.5 0.8 113 chr3L 8859319 intron dally + chr3L 8859376 intron dally + chr3L 8859432 intron dally + chr3L_6_8855001 chr3L_8855001 RAL-492 1414 chr3L 8928253 8928295 chr3L 8928349 8928391 8 96 2.5 2.5 2.5 2.3 138 chr3L 8928253 intron Tsp66E + chr3L 8928322 intron Tsp66E + chr3L 8928391 intron Tsp66E + chr3L_8_8925001 chr3L_8925001 RAL-492 1415 chr3L 8949381 8949508 chr3L 8949498 8949609 5 129 0.5 0.0 0.2 4.2 228 chr3L 8949381 intron,intron CG43783 -,orb2 - chr3L 8949495 intron,intron CG43783 -,orb2 - chr3L 8949609 intron,intron CG43783 -,orb2 - chr3L_5_8945001 chr3L_8945001 RAL-492 1416 chr3L 9003932 9003974 chr3L 9004037 9004076 16 103 3.5 2.0 2.8 4.2 144 chr3L 9003932 intergenic not near genes chr3L 9004004 intergenic not near genes chr3L 9004076 intergenic not near genes chr3L_16_9000001 chr3L_9000001 RAL-492 1417 chr3L 9012209 9012251 chr3L 9012365 9012387 11 154 3.5 3.0 3.2 2.6 178 chr3L 9012209 intergenic Doc2 - chr3L 9012298 intergenic Doc2 - chr3L 9012387 intergenic Doc2 - chr3L_11_9010001 chr3L_9010001 RAL-492 1418 chr3L 9013690 9013691 chr3L 18417066 18417066 7 9403375 34.5 22.5 28.5 0.2 9403376 chr3L 9013690 intron Doc2 - chr3L 13715378 intron bru-3 - chr3L 18417066 intergenic not near genes chr3L_7_13715001 chr3L_13715001 RAL-492 1419 chr3L 9076912 9076958 chr3L 9084492 9084538 412 17 7577 8.5 12.0 10.2 1.5 7626 chr3L 9076912 exon Tequila + chr3L 9080725 intron Tequila + chr3L 9084538 exon Tequila + chr3L_17_9080001 chr3L_9080001 RAL-492 1420 chr3L 9115224 9115251 chr3L 9115327 9115353 10 102 5.0 1.5 3.2 2.4 129 chr3L 9115224 intron bol - chr3L 9115288 intron bol - chr3L 9115353 intron bol - chr3L_10_9115001 chr3L_9115001 RAL-492 1421 chr3L 9115252 9115273 chr3L 9115325 9115375 11 97 3.5 1.5 2.5 3.1 123 chr3L 9115252 intron bol - chr3L 9115314 intron bol - chr3L 9115375 intron bol - chr3L_11_9115001 chr3L_9115001 RAL-492 1422 chr3L 9130545 9130549 chr3L 9134323 9134330 412 4 3780 8.0 2.0 5.0 0.7 3785 chr3L 9130545 intergenic bol - chr3L 9132438 intergenic not near genes chr3L 9134330 intergenic Dhpr + chr3L_4_9130001 chr3L_9130001 RAL-492 1423 chr3L 9130552 9130581 chr3L 9134319 9134362 412 11 3776 5.0 1.5 3.2 2.6 3810 chr3L 9130552 intergenic bol - chr3L 9132457 intergenic not near genes chr3L 9134362 intergenic Dhpr + chr3L_11_9130001 chr3L_9130001 RAL-492 1424 chr3L 9164679 9164712 chr3L 9166162 9166199 hobo 12 1485 6.0 0.5 3.2 2.9 1520 chr3L 9164679 intron Rdl - chr3L 9165439 intron Rdl - chr3L 9166199 intron Rdl - chr3L_12_9165001 chr3L_9165001 RAL-492 1425 chr3L 9167268 9167303 chr3L 9167369 9167401 4 100 2.0 2.0 2.0 1.3 133 chr3L 9167268 intron Rdl - chr3L 9167334 intron Rdl - chr3L 9167401 intron Rdl - chr3L_4_9165001 chr3L_9165001 RAL-492 1426 chr3L 9194133 9194146 chr3L 9194268 9194281 5 135 5.0 0.0 2.5 1.4 148 chr3L 9194133 intergenic not near genes chr3L 9194207 intergenic not near genes chr3L 9194281 intergenic not near genes chr3L_5_9190001 chr3L_9190001 RAL-492 1427 chr3L 9213230 9213244 chr3L 9213330 9213340 4 99 5.0 5.5 5.2 0.6 110 chr3L 9213230 intron CG4476 + chr3L 9213285 intron CG4476 + chr3L 9213340 intron CG4476 + chr3L_4_9210001 chr3L_9210001 RAL-492 1428 chr3L 9219228 9219255 chr3L 9219920 9219947 jockey 8 687 11.0 6.5 8.8 0.8 719 chr3L 9219228 intergenic not near genes chr3L 9219588 intergenic not near genes chr3L 9219947 intergenic not near genes chr3L_8_9215001 chr3L_9215001 RAL-492 1429 chr3L 9219257 9219272 chr3L 9219918 9219931 jockey 4 660 8.0 6.0 7.0 0.5 674 chr3L 9219257 intergenic not near genes chr3L 9219594 intergenic not near genes chr3L 9219931 intergenic not near genes chr3L_4_9215001 chr3L_9215001 RAL-492 1430 chr3L 9237983 9238008 chr3L 9238055 9238108 8 92 2.0 4.5 3.2 1.9 125 chr3L 9237983 intergenic not near genes chr3L 9238046 intergenic not near genes chr3L 9238108 intergenic not near genes chr3L_8_9235001 chr3L_9235001 RAL-492 1431 chr3L 9241871 9241919 chr3L 9241984 9242032 12 112 2.5 3.0 2.8 3.2 161 chr3L 9241871 intergenic not near genes chr3L 9241952 intergenic not near genes chr3L 9242032 intergenic not near genes chr3L_12_9240001 chr3L_9240001 RAL-492 1432 chr3L 9270605 9270651 chr3L 9278370 9278396 roo 16 7765 3.0 4.5 3.8 3.3 7791 chr3L 9270605 intron GluRIB + chr3L 9274500 intron GluRIB + chr3L 9278396 exon GluRIB + chr3L_16_9270001 chr3L_9270001 RAL-492 1433 chr3L 9295269 9295313 chr3L 9295367 9295394 9 95 2.5 3.0 2.8 2.4 125 chr3L 9295269 intergenic not near genes chr3L 9295332 intergenic not near genes chr3L 9295394 intergenic not near genes chr3L_9_9295001 chr3L_9295001 RAL-492 1434 chr3L 9302456 9302483 chr3L 9302561 9302588 8 104 3.0 0.0 1.5 3.2 132 chr3L 9302456 intergenic not near genes chr3L 9302522 intergenic not near genes chr3L 9302588 intergenic not near genes chr3L_8_9300001 chr3L_9300001 RAL-492 1435 chr3L 9344207 9344224 chr3L 9344290 9344304 7 90 0.0 9.5 4.8 1.2 97 chr3L 9344207 intron PGRP-LC + chr3L 9344256 intron PGRP-LC + chr3L 9344304 intron PGRP-LC + chr3L_7_9340001 chr3L_9340001 RAL-492 1436 chr3L 9348457 9348474 chr3L 9348976 9348996 9 521 1.5 0.0 0.8 5.0 539 chr3L 9348457 intergenic PGRP-LC + chr3L 9348726 intergenic PGRP-LC + chr3L 9348996 intergenic not near genes chr3L_9_9345001 chr3L_9345001 RAL-492 1437 chr3L 9443495 9443535 chr3L 9445306 9445345 S-element 10 1808 6.0 3.5 4.8 1.7 1850 chr3L 9443495 intron CG33926 + chr3L 9444420 intron CG33926 + chr3L 9445345 intron CG33926 + chr3L_10_9440001 chr3L_9440001 RAL-492 1438 chr3L 9465470 9465484 chr3L 9465548 9465549 5 85 4.0 4.0 4.0 1.0 79 chr3L 9465470 intron CG44838 + chr3L 9465510 intron CG44838 + chr3L 9465549 intron CG44838 + chr3L_5_9465001 chr3L_9465001 RAL-492 1439 chr3L 9498180 9498190 chr3L 9498277 9498287 4 97 7.0 2.0 4.5 0.7 107 chr3L 9498180 intron path - chr3L 9498234 intron path - chr3L 9498287 intron path - chr3L_4_9495001 chr3L_9495001 RAL-492 1440 chr3L 9498204 9498231 chr3L 9498276 9498328 6 92 1.0 2.0 1.5 2.4 124 chr3L 9498204 intron path - chr3L 9498266 intron path - chr3L 9498328 intron path - chr3L_6_9495001 chr3L_9495001 RAL-492 1441 chr3L 9501684 9501731 chr3L 9502187 9502214 roo 6 500 7.0 3.0 5.0 1.0 530 chr3L 9501684 intron path - chr3L 9501949 intron path - chr3L 9502214 intron path - chr3L_6_9500001 chr3L_9500001 RAL-492 1442 chr3L 9502595 9502635 chr3L 9502695 9502735 6 100 4.5 2.5 3.5 1.3 140 chr3L 9502595 intron path - chr3L 9502665 intron path - chr3L 9502735 intron path - chr3L_6_9500001 chr3L_9500001 RAL-492 1443 chr3L 9503447 9503457 chr3L 9503556 9503566 4 109 8.5 7.5 8.0 0.4 119 chr3L 9503447 intron path - chr3L 9503506 intron path - chr3L 9503566 intron path - chr3L_4_9500001 chr3L_9500001 RAL-492 1444 chr3L 9510893 9510957 chr3L 9511003 9511053 9 104 0.0 2.5 1.2 4.1 160 chr3L 9510893 intron RpS9 - chr3L 9510973 intron RpS9 - chr3L 9511053 intron RpS9 - chr3L_9_9510001 chr3L_9510001 RAL-492 1445 chr3L 9557902 9557942 chr3L 9558247 9558264 4 337 3.0 4.0 3.5 0.9 362 chr3L 9557902 intron CG42673 + chr3L 9558083 intron CG42673 + chr3L 9558264 intron CG42673 + chr3L_4_9555001 chr3L_9555001 RAL-492 1446 chr3L 9575907 9575947 chr3L 9580990 9581001 jockey 10 5086 5.0 6.5 5.8 1.5 5094 chr3L 9575907 intron CG42673 + chr3L 9578454 intron CG42673 + chr3L 9581001 intron CG42673 + chr3L_10_9575001 chr3L_9575001 RAL-492 1447 chr3L 9635562 9635607 chr3L 9635659 9635704 14 97 1.5 2.5 2.0 4.7 142 chr3L 9635562 intron fry - chr3L 9635633 intron fry - chr3L 9635704 exon fry - chr3L_14_9635001 chr3L_9635001 RAL-492 1448 chr3L 9699908 9699963 chr3L 9700015 9700070 11 103 1.5 3.5 2.5 3.1 162 chr3L 9699908 3` UTR UbcD4 + chr3L 9699989 3` UTR UbcD4 + chr3L 9700070 3` UTR UbcD4 + chr3L_11_9695001 chr3L_9695001 RAL-492 1449 chr3L 9715587 9715622 chr3L 9715683 9715718 6 96 1.5 3.5 2.5 1.7 131 chr3L 9715587 intron vsg + chr3L 9715652 intron vsg + chr3L 9715718 intron vsg + chr3L_6_9715001 chr3L_9715001 RAL-492 1450 chr3L 9742865 9742896 chr3L 9743088 9743127 12 228 12.5 4.5 8.5 1.3 262 chr3L 9742865 intron,intron CG42268 -,CR44348 + chr3L 9742996 intron,intron CG42268 -,CR44348 + chr3L 9743127 intron,intron CG42268 -,CR44348 + chr3L_12_9740001 chr3L_9740001 RAL-492 1451 chr3L 9742897 9742910 chr3L 9743083 9743140 10 214 7.0 4.5 5.8 1.5 243 chr3L 9742897 intron,intron CG42268 -,CR44348 + chr3L 9743018 intron,intron CG42268 -,CR44348 + chr3L 9743140 intron,intron CG42268 -,CR44348 + chr3L_10_9740001 chr3L_9740001 RAL-492 1452 chr3L 9745466 9745517 chr3L 9745572 9745623 12 105 7.0 2.5 4.8 2.1 157 chr3L 9745466 intron CG42268 - chr3L 9745544 intron CG42268 - chr3L 9745623 intron CG42268 - chr3L_12_9745001 chr3L_9745001 RAL-492 1453 chr3L 9824139 9824164 chr3L 9824237 9824263 8 96 3.5 0.0 1.8 2.9 124 chr3L 9824139 intron CG43897 + chr3L 9824201 intron CG43897 + chr3L 9824263 intron CG43897 + chr3L_8_9820001 chr3L_9820001 RAL-492 1454 chr3L 9829028 9829080 chr3L 9829130 9829182 11 101 2.5 6.5 4.5 2.0 154 chr3L 9829028 intron CG43897 + chr3L 9829105 intron CG43897 + chr3L 9829182 intron CG43897 + chr3L_11_9825001 chr3L_9825001 RAL-492 1455 chr3L 9918861 9918913 chr3L 9918974 9919027 17 108 2.5 3.0 2.8 4.5 166 chr3L 9918861 intron CG34356 + chr3L 9918944 intron CG34356 + chr3L 9919027 intron CG34356 + chr3L_17_9915001 chr3L_9915001 RAL-492 1456 chr3L 9929652 9929688 chr3L 9938451 9938486 roo 11 8798 6.5 5.5 6.0 1.6 8834 chr3L 9929652 intron CG34356 + chr3L 9934069 intron CG34356 + chr3L 9938486 intron CG34356 + chr3L_11_9930001 chr3L_9930001 RAL-492 1457 chr3L 9987097 9987143 chr3L 9987194 9987241 8 88 3.5 3.0 3.2 1.9 144 chr3L 9987097 intron dpr6 + chr3L 9987169 intron dpr6 + chr3L 9987241 intron dpr6 + chr3L_8_9985001 chr3L_9985001 RAL-492 1458 chr3L 10060094 10060114 chr3L 10067693 10067712 17.6 6 7596 7.0 1.5 4.2 1.2 7618 chr3L 10060094 intron dpr6 + chr3L 10063903 intron dpr6 + chr3L 10067712 intron dpr6 + chr3L_6_10060001 chr3L_10060001 RAL-492 1459 chr3L 10214711 10214830 chr3L 10214818 10214951 8 110 0.0 0.0 0.0 8.0 240 chr3L 10214711 intergenic not near genes chr3L 10214831 intergenic not near genes chr3L 10214951 intergenic not near genes chr3L_8_10210001 chr3L_10210001 RAL-492 1460 chr3L 10222746 10222777 chr3L 10222846 10222877 11 99 1.5 3.0 2.2 3.4 131 chr3L 10222746 intron scramb1 - chr3L 10222812 intron scramb1 - chr3L 10222877 intron scramb1 - chr3L_11_10220001 chr3L_10220001 RAL-492 1461 chr3L 10298657 10298696 chr3L 10298764 10298803 8 107 0.5 1.5 1.0 4.0 146 chr3L 10298657 intergenic not near genes chr3L 10298730 intergenic not near genes chr3L 10298803 intergenic not near genes chr3L_8_10295001 chr3L_10295001 RAL-492 1462 chr3L 10308724 10308765 chr3L 10308817 10308862 17 95 1.5 3.0 2.2 5.3 138 chr3L 10308724 intergenic not near genes chr3L 10308793 intergenic not near genes chr3L 10308862 intergenic not near genes chr3L_17_10305001 chr3L_10305001 RAL-492 1463 chr3L 10397284 10397316 chr3L 10397383 10397415 6 99 9.5 0.0 4.8 1.0 131 chr3L 10397284 intergenic not near genes chr3L 10397350 intergenic not near genes chr3L 10397415 intergenic not near genes chr3L_6_10395001 chr3L_10395001 RAL-492 1464 chr3L 10414933 10414965 chr3L 10417325 10417357 Doc 7 2391 0.0 6.0 3.0 1.8 2424 chr3L 10414933 intergenic CG12362 + chr3L 10416145 intergenic not near genes chr3L 10417357 intergenic not near genes chr3L_7_10415001 chr3L_10415001 RAL-492 1465 chr3L 10417570 10417599 chr3L 10417647 10417681 14 78 5.5 4.5 5.0 2.3 111 chr3L 10417570 intergenic not near genes chr3L 10417626 intergenic not near genes chr3L 10417681 intergenic not near genes chr3L_14_10415001 chr3L_10415001 RAL-492 1466 chr3L 10439944 10439952 chr3L 10440050 10440055 5 105 5.5 4.5 5.0 0.8 111 chr3L 10439944 intergenic not near genes chr3L 10440000 intergenic not near genes chr3L 10440055 intergenic not near genes chr3L_5_10440001 chr3L_10440001 RAL-492 1467 chr3L 10439957 10439979 chr3L 10440039 10440084 5 102 1.5 3.0 2.2 1.6 127 chr3L 10439957 intergenic not near genes chr3L 10440020 intergenic not near genes chr3L 10440084 intergenic not near genes chr3L_5_10440001 chr3L_10440001 RAL-492 1468 chr3L 10485062 10485108 chr3L 10485243 10485290 11 178 2.5 4.0 3.2 2.6 228 chr3L 10485062 intron A2bp1 + chr3L 10485176 intron A2bp1 + chr3L 10485290 intron A2bp1 + chr3L_11_10485001 chr3L_10485001 RAL-492 1469 chr3L 10505622 10505673 chr3L 10505718 10505769 7 92 1.5 2.5 2.0 2.3 147 chr3L 10505622 intron A2bp1 + chr3L 10505696 intron A2bp1 + chr3L 10505769 intron A2bp1 + chr3L_7_10505001 chr3L_10505001 RAL-492 1470 chr3L 10544986 10544995 chr3L 10545082 10545091 5 96 9.5 4.0 6.8 0.6 105 chr3L 10544986 intron A2bp1 + chr3L 10545038 intron A2bp1 + chr3L 10545091 intron A2bp1 + chr3L_5_10545001 chr3L_10545001 RAL-492 1471 chr3L 10544997 10545038 chr3L 10545080 10545134 17 91 4.0 4.5 4.2 3.3 137 chr3L 10544997 intron A2bp1 + chr3L 10545066 intron A2bp1 + chr3L 10545134 intron A2bp1 + chr3L_17_10545001 chr3L_10545001 RAL-492 1472 chr3L 10621833 10621879 chr3L 10621940 10621985 12 105 2.0 2.5 2.2 3.8 152 chr3L 10621833 intergenic not near genes chr3L 10621909 intergenic not near genes chr3L 10621985 intergenic not near genes chr3L_12_10620001 chr3L_10620001 RAL-492 1473 chr3L 10658066 10658208 chr3L 10658162 10658355 20 126 0.0 0.0 0.0 20.0 289 chr3L 10658066 intron CG32066 - chr3L 10658210 intron CG32066 - chr3L 10658355 intron CG32066 - chr3L_20_10655001 chr3L_10655001 RAL-492 1474 chr3L 10812712 10812760 chr3L 10812830 10812848 15 115 3.0 2.0 2.5 4.3 136 chr3L 10812712 intergenic not near genes chr3L 10812780 intergenic not near genes chr3L 10812848 intergenic not near genes chr3L_15_10810001 chr3L_10810001 RAL-492 1475 chr3L 10881308 10881316 chr3L 10881473 10881488 4 165 9.5 23.5 16.5 0.2 180 chr3L 10881308 exon CG6409 - chr3L 10881398 exon CG6409 - chr3L 10881488 exon CG6409 - chr3L_4_10880001 chr3L_10880001 RAL-492 1476 chr3L 11018288 11018340 chr3L 11018477 11018517 10 183 2.5 2.0 2.2 3.1 229 chr3L 11018288 intergenic not near genes chr3L 11018402 intergenic not near genes chr3L 11018517 intergenic not near genes chr3L_10_11015001 chr3L_11015001 RAL-492 1477 chr3L 11042097 11042120 chr3L 11042256 11042279 5 159 6.0 0.0 3.0 1.2 182 chr3L 11042097 intron CG43693 - chr3L 11042188 intron CG43693 - chr3L 11042279 intron CG43693 - chr3L_5_11040001 chr3L_11040001 RAL-492 1478 chr3L 11087044 11087088 chr3L 11088850 11088897 S-element 7 1807 4.0 3.5 3.8 1.5 1853 chr3L 11087044 intron JIL-1 - chr3L 11087970 intron JIL-1 - chr3L 11088897 intron JIL-1 - chr3L_7_11085001 chr3L_11085001 RAL-492 1479 chr3L 11105279 11105315 chr3L 11107010 11107024 X-element 5 1726 3.5 1.0 2.2 1.6 1745 chr3L 11105279 intergenic not near genes chr3L 11106152 intergenic not near genes chr3L 11107024 3` UTR CG32073 - chr3L_5_11105001 chr3L_11105001 RAL-492 1480 chr3L 11135508 11135522 chr3L 11135758 11135772 4 250 2.5 1.0 1.8 1.4 264 chr3L 11135508 intergenic CG14143 + chr3L 11135640 intergenic CG14143 +,CG32082 + chr3L 11135772 intergenic CG32082 +,CG14143 + chr3L_4_11135001 chr3L_11135001 RAL-492 1481 chr3L 11241757 11241791 chr3L 11241859 11241892 8 102 1.5 1.0 1.2 3.6 135 chr3L 11241757 intergenic not near genes chr3L 11241824 intergenic not near genes chr3L 11241892 intergenic not near genes chr3L_8_11240001 chr3L_11240001 RAL-492 1482 chr3L 11249841 11249878 chr3L 11249944 11249978 7 102 3.0 2.5 2.8 1.8 137 chr3L 11249841 5` UTR CR44717 + chr3L 11249910 5` UTR CR44717 + chr3L 11249978 5` UTR CR44717 + chr3L_7_11245001 chr3L_11245001 RAL-492 1483 chr3L 11263174 11263212 chr3L 11263482 11263520 14 305 4.0 5.0 4.5 2.5 346 chr3L 11263174 intergenic not near genes chr3L 11263347 intergenic not near genes chr3L 11263520 intergenic not near genes chr3L_14_11260001 chr3L_11260001 RAL-492 1484 chr3L 11264479 11264499 chr3L 11271419 11271471 17.6 4 6963 2.0 2.5 2.2 1.2 6992 chr3L 11264479 intergenic not near genes chr3L 11267975 intergenic not near genes chr3L 11271471 intergenic not near genes chr3L_4_11265001 chr3L_11265001 RAL-492 1485 chr3L 11277450 11277484 chr3L 11278465 11278486 Rt1a 5 1012 1.0 4.5 2.8 1.3 1036 chr3L 11277450 intergenic not near genes chr3L 11277968 intergenic not near genes chr3L 11278486 intergenic not near genes chr3L_5_11275001 chr3L_11275001 RAL-492 1486 chr3L 11290604 11290656 chr3L 11290947 11290998 11 342 0.5 1.0 0.8 6.1 394 chr3L 11290604 intron CG6175 - chr3L 11290801 intron CG6175 - chr3L 11290998 intron CG6175 - chr3L_11_11290001 chr3L_11290001 RAL-492 1487 chr3L 11329673 11329718 chr3L 11332892 11332938 jockey 14 3214 7.5 3.5 5.5 2.2 3265 chr3L 11329673 intergenic not near genes chr3L 11331306 intergenic not near genes chr3L 11332938 intergenic not near genes chr3L_14_11330001 chr3L_11330001 RAL-492 1488 chr3L 11432885 11432935 chr3L 11432984 11433034 10 97 1.5 1.5 1.5 4.0 149 chr3L 11432885 intergenic not near genes chr3L 11432960 intergenic not near genes chr3L 11433034 intergenic not near genes chr3L_10_11430001 chr3L_11430001 RAL-492 1489 chr3L 11435541 11435588 chr3L 11435730 11435777 24 187 3.5 4.5 4.0 4.8 236 chr3L 11435541 intergenic CG6149 -,CR44548 + chr3L 11435659 5` UTR CR44548 + chr3L 11435777 5` UTR CR44548 + chr3L_24_11435001 chr3L_11435001 RAL-492 1490 chr3L 11453048 11453085 chr3L 11453152 11453189 15 103 4.0 5.0 4.5 2.7 141 chr3L 11453048 intergenic not near genes chr3L 11453118 intergenic not near genes chr3L 11453189 intergenic not near genes chr3L_15_11450001 chr3L_11450001 RAL-492 1491 chr3L 11456891 11456901 chr3L 11457010 11457018 7 118 4.5 2.5 3.5 1.6 127 chr3L 11456891 intergenic CG12289 - chr3L 11456954 intergenic CG12289 - chr3L 11457018 intergenic CG12289 - chr3L_7_11455001 chr3L_11455001 RAL-492 1492 chr3L 11553718 11553758 chr3L 11553839 11553880 5 121 1.5 3.0 2.2 1.6 162 chr3L 11553718 intron Mob2 - chr3L 11553799 intron Mob2 - chr3L 11553880 intron Mob2 - chr3L_5_11550001 chr3L_11550001 RAL-492 1493 chr3L 11564799 11564811 chr3L 11572409 11572428 412 4 7619 3.0 3.0 3.0 1.0 7629 chr3L 11564799 exon CG33267 + chr3L 11568614 intron CG33267 + chr3L 11572428 exon CG33267 + chr3L_4_11565001 chr3L_11565001 RAL-492 1494 chr3L 11579548 11579551 chr3L 11579664 11579677 4 122 6.0 2.0 4.0 0.8 129 chr3L 11579548 intergenic CG43390 - chr3L 11579612 intergenic CG43390 - chr3L 11579677 intergenic CG43390 - chr3L_4_11575001 chr3L_11575001 RAL-492 1495 chr3L 11579555 11579581 chr3L 11579663 11579707 10 124 1.0 2.0 1.5 4.0 152 chr3L 11579555 intergenic CG43390 - chr3L 11579631 intergenic CG43390 - chr3L 11579707 intergenic CG43390 - chr3L_10_11575001 chr3L_11575001 RAL-492 1496 chr3L 11648499 11648507 chr3L 11648602 11648610 7 103 13.0 0.0 6.5 0.9 111 chr3L 11648499 intergenic RIOK1 -,CG7339 + chr3L 11648554 intergenic RIOK1 -,CG7339 + chr3L 11648610 intergenic RIOK1 -,CG7339 + chr3L_7_11645001 chr3L_11645001 RAL-492 1497 chr3L 11659413 11659453 chr3L 11659758 11659798 9 344 2.5 4.5 3.5 2.0 385 chr3L 11659413 intron CG32085 - chr3L 11659606 intron CG32085 - chr3L 11659798 intron CG32085 - chr3L_9_11655001 chr3L_11655001 RAL-492 1498 chr3L 11663734 11663757 chr3L 11663879 11663902 5 145 1.5 0.0 0.8 2.8 168 chr3L 11663734 intron CG32085 - chr3L 11663818 intron CG32085 - chr3L 11663902 intron CG32085 - chr3L_5_11660001 chr3L_11660001 RAL-492 1499 chr3L 11673958 11673977 chr3L 11674053 11674073 4 96 6.0 0.0 3.0 1.0 115 chr3L 11673958 intron CG32085 - chr3L 11674016 intron CG32085 - chr3L 11674073 intron CG32085 - chr3L_4_11670001 chr3L_11670001 RAL-492 1500 chr3L 11723071 11723105 chr3L 11727886 11727920 Doc 14 4815 4.0 3.0 3.5 3.1 4849 chr3L 11723071 3` UTR Bmcp + chr3L 11725496 intron Bmcp + chr3L 11727920 3` UTR Bmcp + chr3L_14_11725001 chr3L_11725001 RAL-492 1501 chr3L 11743998 11744023 chr3L 11744125 11744149 8 124 5.5 2.0 3.8 1.7 151 chr3L 11743998 exon CG6024 - chr3L 11744074 intron CG6024 - chr3L 11744149 intron CG6024 - chr3L_8_11740001 chr3L_11740001 RAL-492 1502 chr3L 11757899 11757937 chr3L 11758014 11758054 5 116 2.0 0.0 1.0 2.5 155 chr3L 11757899 intron CG6024 - chr3L 11757976 intron CG6024 - chr3L 11758054 intron CG6024 - chr3L_5_11755001 chr3L_11755001 RAL-492 1503 chr3L 7749471 7749471 chr3L 11777678 11777678 8 4028207 12.5 19.5 16.0 0.5 4028207 chr3L 7749471 intron,3` UTR CG32373 +,CG13685 + chr3L 9763574 5` UTR CG8177 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_8_9760001 chr3L_9760001 RAL-492 1504 chr3L 9313026 9313027 chr3L 11777678 11777678 10 2464651 15.5 19.5 17.5 0.5 2464652 chr3L 9313026 intergenic not near genes chr3L 10545352 intron A2bp1 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_10_10545001 chr3L_10545001 RAL-492 1505 chr3L 11777678 11777678 chr3L 12163305 12163305 4 385627 21.5 25.0 23.2 0.2 385627 chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L 11970492 exon Muc68E - chr3L 12163305 intron CG9760 - chr3L_4_11970001 chr3L_11970001 RAL-492 1506 chr3L 11833728 11833752 chr3L 11834006 11834030 6 278 2.0 2.5 2.2 1.9 302 chr3L 11833728 intergenic CycA - chr3L 11833879 intergenic CycA - chr3L 11834030 intergenic CycA - chr3L_6_11830001 chr3L_11830001 RAL-492 1507 chr3L 11837164 11837169 chr3L 11837265 11837270 4 101 1.0 0.0 0.5 2.7 106 chr3L 11837164 intergenic CG43064 - chr3L 11837217 intergenic CG43064 - chr3L 11837270 intergenic not near genes chr3L_4_11835001 chr3L_11835001 RAL-492 1508 chr3L 11864536 11864585 chr3L 11865848 11865900 pogo 18 1314 1.0 5.5 3.2 4.3 1364 chr3L 11864536 intron CG44837 - chr3L 11865218 intron CG44837 - chr3L 11865900 intron CG44837 - chr3L_18_11865001 chr3L_11865001 RAL-492 1509 chr3L 11872649 11872680 chr3L 11873006 11873041 11 356 4.5 7.5 6.0 1.6 392 chr3L 11872649 intron CG44837 - chr3L 11872845 intron CG44837 - chr3L 11873041 intron CG44837 - chr3L_11_11870001 chr3L_11870001 RAL-492 1510 chr3L 11905104 11905139 chr3L 11905206 11905239 10 97 2.5 6.0 4.2 1.9 135 chr3L 11905104 intron CG44837 - chr3L 11905172 intron CG44837 - chr3L 11905239 intron CG44837 - chr3L_10_11905001 chr3L_11905001 RAL-492 1511 chr3L 11943482 11943520 chr3L 11943602 11943638 10 120 1.0 5.0 3.0 2.5 156 chr3L 11943482 3` UTR Rpt4R + chr3L 11943560 intergenic Rpt4R +,CG5883 - chr3L 11943638 intergenic CG5883 -,Rpt4R + chr3L_10_11940001 chr3L_11940001 RAL-492 1512 chr3L 11984545 11984600 chr3L 11984656 11984711 9 104 3.5 0.0 1.8 3.2 166 chr3L 11984545 intergenic CG6938 + chr3L 11984628 intergenic CG6938 + chr3L 11984711 intergenic CG6938 + chr3L_9_11980001 chr3L_11980001 RAL-492 1513 chr3L 12019316 12019341 chr3L 12019449 12019474 6 130 4.5 1.5 3.0 1.5 158 chr3L 12019316 intron rols - chr3L 12019395 intron rols - chr3L 12019474 intron rols - chr3L_6_12015001 chr3L_12015001 RAL-492 1514 chr3L 12075411 12075453 chr3L 12075520 12075557 6 108 6.0 0.0 3.0 1.5 146 chr3L 12075411 intron Sema-5c - chr3L 12075484 intron Sema-5c - chr3L 12075557 intron Sema-5c - chr3L_6_12075001 chr3L_12075001 RAL-492 1515 chr3L 12126379 12126390 chr3L 12126557 12126605 9 188 24.0 34.0 29.0 0.3 226 chr3L 12126379 exon Ir68b - chr3L 12126492 exon Ir68b - chr3L 12126605 exon Ir68b - chr3L_9_12125001 chr3L_12125001 RAL-492 1516 chr3L 12170771 12170823 chr3L 12170873 12170925 9 102 1.0 1.5 1.2 4.1 154 chr3L 12170771 intron Rh7 - chr3L 12170848 intron Rh7 - chr3L 12170925 intron Rh7 - chr3L_9_12170001 chr3L_12170001 RAL-492 1517 chr3L 12186384 12186399 chr3L 12186533 12186548 6 148 2.0 3.5 2.8 1.6 164 chr3L 12186384 intron CG6910 + chr3L 12186466 intron CG6910 + chr3L 12186548 exon CG6910 + chr3L_6_12185001 chr3L_12185001 RAL-492 1518 chr3L 12249992 12250010 chr3L 12250128 12250161 5 140 5.0 7.0 6.0 0.7 169 chr3L 12249992 intron app - chr3L 12250076 intron app - chr3L 12250161 intron app - chr3L_5_12250001 chr3L_12250001 RAL-492 1519 chr3L 12335365 12335414 chr3L 12335464 12335510 9 84 9.5 3.5 6.5 1.2 145 chr3L 12335365 exon CG32105 + chr3L 12335438 3` UTR CG32105 + chr3L 12335510 3` UTR CG32105 + chr3L_9_12335001 chr3L_12335001 RAL-492 1520 chr3L 12343747 12343769 chr3L 12344964 12344999 7 1229 5.5 5.0 5.2 1.1 1252 chr3L 12343747 intron CrzR - chr3L 12344373 intron CrzR - chr3L 12344999 intron CrzR - chr3L_7_12340001 chr3L_12340001 RAL-492 1521 chr3L 12369508 12369559 chr3L 12369702 12369754 4 194 2.5 0.0 1.2 1.8 246 chr3L 12369508 intron Ncc69 - chr3L 12369631 intron Ncc69 - chr3L 12369754 intron Ncc69 - chr3L_4_12365001 chr3L_12365001 RAL-492 1522 chr3L 12591630 12591642 chr3L 12591709 12591710 4 80 8.5 5.0 6.8 0.5 80 chr3L 12591630 intron ara + chr3L 12591670 intron ara + chr3L 12591710 intron ara + chr3L_4_12590001 chr3L_12590001 RAL-492 1523 chr3L 12626150 12626163 chr3L 12626279 12626292 4 129 0.5 3.5 2.0 1.3 142 chr3L 12626150 intergenic not near genes chr3L 12626221 intergenic not near genes chr3L 12626292 intergenic not near genes chr3L_4_12625001 chr3L_12625001 RAL-492 1524 chr3L 12706631 12706641 chr3L 12706778 12706787 5 147 7.5 0.0 3.8 1.0 156 chr3L 12706631 intron mirr + chr3L 12706709 intron mirr + chr3L 12706787 intron mirr + chr3L_5_12705001 chr3L_12705001 RAL-492 1525 chr3L 12857996 12858003 chr3L 12858111 12858118 4 115 0.5 1.0 0.8 2.2 122 chr3L 12857996 3` UTR CG32107 - chr3L 12858057 3` UTR CG32107 - chr3L 12858118 3` UTR CG32107 - chr3L_4_12855001 chr3L_12855001 RAL-492 1526 chr3L 12874915 12874959 chr3L 12877226 12877271 jockey 12 2312 3.0 3.0 3.0 3.0 2356 chr3L 12874915 intergenic not near genes chr3L 12876093 intergenic not near genes chr3L 12877271 intergenic not near genes chr3L_12_12875001 chr3L_12875001 RAL-492 1527 chr3L 12886478 12886633 chr3L 12886683 12886684 4 108 7.0 12.0 9.5 0.4 206 chr3L 12886478 exon CG14120 + chr3L 12886581 exon CG14120 + chr3L 12886684 exon CG14120 + chr3L_4_12885001 chr3L_12885001 RAL-492 1528 chr3L 12894784 12894815 chr3L 12894882 12894886 8 91 7.0 8.0 7.5 0.9 102 chr3L 12894784 intergenic CG14118 + chr3L 12894835 intergenic CG14118 + chr3L 12894886 intergenic CG14118 + chr3L_8_12890001 chr3L_12890001 RAL-492 1529 chr3L 12919263 12919304 chr3L 12924766 12924769 Rt1c 5 5495 6.0 5.0 5.5 0.8 5506 chr3L 12919263 intergenic not near genes chr3L 12922016 intergenic not near genes chr3L 12924769 intergenic not near genes chr3L_5_12920001 chr3L_12920001 RAL-492 1530 chr3L 12928197 12928207 chr3L 12928344 12928354 4 147 4.5 3.5 4.0 0.8 157 chr3L 12928197 intergenic not near genes chr3L 12928276 intergenic not near genes chr3L 12928354 intergenic not near genes chr3L_4_12925001 chr3L_12925001 RAL-492 1531 chr3L 12928208 12928229 chr3L 12928343 12928376 5 144 2.0 2.5 2.2 1.6 168 chr3L 12928208 intergenic not near genes chr3L 12928292 intergenic not near genes chr3L 12928376 intergenic not near genes chr3L_5_12925001 chr3L_12925001 RAL-492 1532 chr3L 12957782 12957815 chr3L 12962270 12962315 copia 17 4499 7.0 11.5 9.2 1.7 4533 chr3L 12957782 intergenic not near genes chr3L 12960048 intergenic not near genes chr3L 12962315 intergenic not near genes chr3L_17_12960001 chr3L_12960001 RAL-492 1533 chr3L 12966969 12967009 chr3L 12967611 12967637 10 641 2.0 8.0 5.0 1.7 668 chr3L 12966969 exon Or69a - chr3L 12967303 exon Or69a - chr3L 12967637 exon Or69a - chr3L_10_12965001 chr3L_12965001 RAL-492 1534 chr3L 12978736 12978782 chr3L 12978835 12978839 8 93 5.5 0.0 2.8 2.1 103 chr3L 12978736 intergenic not near genes chr3L 12978788 intergenic not near genes chr3L 12978839 intergenic not near genes chr3L_8_12975001 chr3L_12975001 RAL-492 1535 chr3L 12980498 12980552 chr3L 12980606 12980665 9 106 2.5 0.0 1.2 4.1 167 chr3L 12980498 intergenic not near genes chr3L 12980582 intergenic not near genes chr3L 12980665 intergenic not near genes chr3L_9_12980001 chr3L_12980001 RAL-492 1536 chr3L 13007679 13007949 chr3L 13007773 13008030 20 94 2.0 2.0 2.0 6.7 351 chr3L 13007679 exon CG11263 + chr3L 13007854 3` UTR CG11263 + chr3L 13008030 intergenic CG11263 +,CG14117 + chr3L_20_13005001 chr3L_13005001 RAL-492 1537 chr3L 13085055 13085082 chr3L 13085137 13085179 9 93 3.5 7.0 5.2 1.5 124 chr3L 13085055 intergenic not near genes chr3L 13085117 intergenic not near genes chr3L 13085179 intergenic not near genes chr3L_9_13085001 chr3L_13085001 RAL-492 1538 chr3L 13095802 13095833 chr3L 13095910 13095941 8 108 6.0 0.0 3.0 2.0 139 chr3L 13095802 intergenic not near genes chr3L 13095872 intergenic not near genes chr3L 13095941 intergenic not near genes chr3L_8_13095001 chr3L_13095001 RAL-492 1539 chr3L 13144104 13144144 chr3L 13144201 13144241 10 96 2.0 3.5 2.8 2.6 137 chr3L 13144104 intergenic not near genes chr3L 13144172 intergenic not near genes chr3L 13144241 intergenic not near genes chr3L_10_13140001 chr3L_13140001 RAL-492 1540 chr3L 13206228 13206261 chr3L 13206315 13206359 10 92 2.5 4.5 3.5 2.2 131 chr3L 13206228 intergenic not near genes chr3L 13206294 intergenic not near genes chr3L 13206359 intergenic not near genes chr3L_10_13205001 chr3L_13205001 RAL-492 1541 chr3L 13267266 13267317 chr3L 13267399 13267450 10 128 4.0 5.5 4.8 1.7 184 chr3L 13267266 intron caps + chr3L 13267358 intron caps + chr3L 13267450 intron caps + chr3L_10_13265001 chr3L_13265001 RAL-492 1542 chr3L 13400522 13400538 chr3L 13400618 13400634 7 95 1.0 4.5 2.8 1.8 112 chr3L 13400522 intron sens - chr3L 13400578 intron sens - chr3L 13400634 intron sens - chr3L_7_13400001 chr3L_13400001 RAL-492 1543 chr3L 13477003 13477035 chr3L 13477100 13477131 8 97 0.0 7.0 3.5 1.8 128 chr3L 13477003 intergenic not near genes chr3L 13477067 intergenic stv + chr3L 13477131 intergenic stv + chr3L_8_13475001 chr3L_13475001 RAL-492 1544 chr3L 13525145 13525186 chr3L 13532961 13532997 roo 9 7808 5.5 5.5 5.5 1.4 7852 chr3L 13525145 intergenic not near genes chr3L 13529071 intergenic not near genes chr3L 13532997 intergenic not near genes chr3L_9_13525001 chr3L_13525001 RAL-492 1545 chr3L 13629513 13629542 chr3L 13629644 13629662 9 129 5.5 7.5 6.5 1.2 149 chr3L 13629513 intron bru-3 - chr3L 13629588 intron bru-3 - chr3L 13629662 intron bru-3 - chr3L_9_13625001 chr3L_13625001 RAL-492 1546 chr3L 13738961 13739005 chr3L 13739059 13739114 19 105 3.5 3.5 3.5 4.2 153 chr3L 13738961 intron bru-3 - chr3L 13739038 intron bru-3 - chr3L 13739114 intron bru-3 - chr3L_19_13735001 chr3L_13735001 RAL-492 1547 chr3L 13804523 13804575 chr3L 13822829 13822860 roo 16 18304 2.5 7.0 4.8 2.8 18337 chr3L 13804523 intergenic not near genes chr3L 13813692 intergenic not near genes chr3L 13822860 intergenic not near genes chr3L_16_13810001 chr3L_13810001 RAL-492 1548 chr3L 13884359 13884378 chr3L 13884470 13884489 5 111 4.0 1.5 2.8 1.3 130 chr3L 13884359 intron dysc - chr3L 13884424 intron dysc - chr3L 13884489 intron dysc - chr3L_5_13880001 chr3L_13880001 RAL-492 1549 chr3L 13901552 13901592 chr3L 13901646 13901689 11 96 4.0 3.0 3.5 2.4 137 chr3L 13901552 intron dysc - chr3L 13901620 intron dysc - chr3L 13901689 5` UTR dysc - chr3L_11_13900001 chr3L_13900001 RAL-492 1550 chr3L 13920402 13920432 chr3L 13920502 13920532 7 100 0.0 3.0 1.5 2.8 130 chr3L 13920402 intron Rgl - chr3L 13920467 intron Rgl - chr3L 13920532 intron Rgl - chr3L_7_13920001 chr3L_13920001 RAL-492 1551 chr3L 14199325 14199367 chr3L 14199434 14199477 23 110 5.5 3.5 4.5 4.2 152 chr3L 14199325 intron nuf + chr3L 14199401 intron nuf + chr3L 14199477 intron nuf + chr3L_23_14195001 chr3L_14195001 RAL-492 1552 chr3L 14211422 14211464 chr3L 14211520 14211562 10 98 2.0 2.5 2.2 3.1 140 chr3L 14211422 intron nuf + chr3L 14211492 intron nuf + chr3L 14211562 intron nuf + chr3L_10_14210001 chr3L_14210001 RAL-492 1553 chr3L 14234828 14234856 chr3L 14234945 14234973 7 117 1.5 2.5 2.0 2.3 145 chr3L 14234828 intergenic CG7924 +,CG34244 - chr3L 14234900 intergenic CG34244 -,CG7924 + chr3L 14234973 intergenic CG34244 -,CG7924 + chr3L_7_14230001 chr3L_14230001 RAL-492 1554 chr3L 14239978 14240004 chr3L 14240095 14240121 10 116 2.5 3.0 2.8 2.6 143 chr3L 14239978 intergenic not near genes chr3L 14240050 intergenic not near genes chr3L 14240121 intergenic not near genes chr3L_10_14240001 chr3L_14240001 RAL-492 1555 chr3L 14245554 14245588 chr3L 14245668 14245702 1360 17 108 5.0 4.5 4.8 2.9 148 chr3L 14245554 3` UTR CR44561 - chr3L 14245628 3` UTR CR44561 - chr3L 14245702 intergenic CR44561 -,CR44560 + chr3L_17_14245001 chr3L_14245001 RAL-492 1556 chr3L 14276877 14276918 chr3L 14276984 14277025 11 104 7.5 3.5 5.5 1.7 148 chr3L 14276877 intron fz + chr3L 14276951 intron fz + chr3L 14277025 intron fz + chr3L_11_14275001 chr3L_14275001 RAL-492 1557 chr3L 14282580 14282603 chr3L 14282679 14282699 6 99 7.5 11.5 9.5 0.6 119 chr3L 14282580 intron fz + chr3L 14282640 intron fz + chr3L 14282699 intron fz + chr3L_6_14280001 chr3L_14280001 RAL-492 1558 chr3L 14286640 14286672 chr3L 14286737 14286771 6 98 2.0 3.0 2.5 1.7 131 chr3L 14286640 intron fz + chr3L 14286706 intron fz + chr3L 14286771 intron fz + chr3L_6_14285001 chr3L_14285001 RAL-492 1559 chr3L 14295964 14296011 chr3L 14296470 14296515 roo 16 502 4.5 2.5 3.5 3.6 551 chr3L 14295964 intron fz + chr3L 14296240 intron fz + chr3L 14296515 intron fz + chr3L_16_14295001 chr3L_14295001 RAL-492 1560 chr3L 14312029 14312060 chr3L 14316834 14316841 X-element 5 4807 1.0 3.5 2.2 1.6 4812 chr3L 14312029 exon fz + chr3L 14314435 intron fz + chr3L 14316841 intron fz + chr3L_5_14310001 chr3L_14310001 RAL-492 1561 chr3L 14318639 14318679 chr3L 14318751 14318791 10 111 4.0 0.0 2.0 3.3 152 chr3L 14318639 intron fz + chr3L 14318715 intron fz + chr3L 14318791 intron fz + chr3L_10_14315001 chr3L_14315001 RAL-492 1562 chr3L 14444702 14444747 chr3L 14444897 14444942 21 194 4.0 4.5 4.2 4.0 240 chr3L 14444702 intron bbg - chr3L 14444822 intron bbg - chr3L 14444942 intron bbg - chr3L_21_14440001 chr3L_14440001 RAL-492 1563 chr3L 14462878 14462910 chr3L 14462985 14463018 7 106 0.0 4.0 2.0 2.3 140 chr3L 14462878 intron bbg - chr3L 14462948 intron bbg - chr3L 14463018 intron bbg - chr3L_7_14460001 chr3L_14460001 RAL-492 1564 chr3L 14468433 14468456 chr3L 14473659 14473682 copia 5 5226 0.0 2.5 1.2 2.3 5249 chr3L 14468433 intron bbg - chr3L 14471058 intron bbg - chr3L 14473682 intron bbg - chr3L_5_14470001 chr3L_14470001 RAL-492 1565 chr3L 14502329 14502342 chr3L 14502489 14502501 5 160 5.5 1.5 3.5 1.1 172 chr3L 14502329 intron bbg - chr3L 14502415 intron bbg - chr3L 14502501 intron bbg - chr3L_5_14500001 chr3L_14500001 RAL-492 1566 chr3L 14534746 14534751 chr3L 14534843 14534848 4 97 5.0 4.5 4.8 0.7 102 chr3L 14534746 intron bbg - chr3L 14534797 intron bbg - chr3L 14534848 intron bbg - chr3L_4_14530001 chr3L_14530001 RAL-492 1567 chr3L 14545753 14545794 chr3L 14545849 14545889 5 96 1.5 5.0 3.2 1.2 136 chr3L 14545753 intron CG9238 - chr3L 14545821 intron CG9238 - chr3L 14545889 intron CG9238 - chr3L_5_14545001 chr3L_14545001 RAL-492 1568 chr3L 14546805 14546816 chr3L 14546926 14546936 4 120 0.0 5.0 2.5 1.1 131 chr3L 14546805 intron CG9238 - chr3L 14546870 intron CG9238 - chr3L 14546936 intron CG9238 - chr3L_4_14545001 chr3L_14545001 RAL-492 1569 chr3L 14565740 14565778 chr3L 14565850 14565889 9 111 2.0 0.0 1.0 4.5 149 chr3L 14565740 intergenic not near genes chr3L 14565814 intergenic not near genes chr3L 14565889 intergenic not near genes chr3L_9_14565001 chr3L_14565001 RAL-492 1570 chr3L 14633770 14633817 chr3L 14633886 14633932 7 114 2.0 5.0 3.5 1.6 162 chr3L 14633770 intron dlp + chr3L 14633851 intron dlp + chr3L 14633932 intron dlp + chr3L_7_14630001 chr3L_14630001 RAL-492 1571 chr3L 14721191 14721209 chr3L 14723023 14723072 Rt1c 5 1849 4.5 3.5 4.0 1.0 1881 chr3L 14721191 intron ome + chr3L 14722132 intron ome + chr3L 14723072 intron ome + chr3L_5_14720001 chr3L_14720001 RAL-492 1572 chr3L 14724811 14724831 chr3L 14724915 14724935 7 104 0.0 6.0 3.0 1.8 124 chr3L 14724811 intron ome + chr3L 14724873 intron ome + chr3L 14724935 intron ome + chr3L_7_14720001 chr3L_14720001 RAL-492 1573 chr3L 14725586 14725616 chr3L 14728600 14728618 Doc 5 3012 1.0 9.5 5.2 0.8 3032 chr3L 14725586 intron ome + chr3L 14727102 intron ome + chr3L 14728618 intron ome + chr3L_5_14725001 chr3L_14725001 RAL-492 1574 chr3L 14840345 14840385 chr3L 14840468 14840491 5 120 1.0 3.0 2.0 1.7 146 chr3L 14840345 intron CG17839 + chr3L 14840418 intron CG17839 + chr3L 14840491 intron CG17839 + chr3L_5_14840001 chr3L_14840001 RAL-492 1575 chr3L 14861784 14861833 chr3L 14861882 14861931 11 95 1.5 3.0 2.2 3.4 147 chr3L 14861784 intron CG17839 + chr3L 14861858 intron CG17839 + chr3L 14861931 intron CG17839 + chr3L_11_14860001 chr3L_14860001 RAL-492 1576 chr3L 14922102 14922135 chr3L 14922214 14922237 4 112 4.5 4.0 4.2 0.8 135 chr3L 14922102 intron DCX-EMAP + chr3L 14922170 intron DCX-EMAP + chr3L 14922237 intron DCX-EMAP + chr3L_4_14920001 chr3L_14920001 RAL-492 1577 chr3L 14933427 14933452 chr3L 14933528 14933552 7 102 2.0 6.0 4.0 1.4 125 chr3L 14933427 intron DCX-EMAP + chr3L 14933490 intron DCX-EMAP + chr3L 14933552 intron DCX-EMAP + chr3L_7_14930001 chr3L_14930001 RAL-492 1578 chr3L 14959312 14959335 chr3L 14959435 14959460 4 124 3.0 1.0 2.0 1.3 148 chr3L 14959312 intergenic not near genes chr3L 14959386 intergenic not near genes chr3L 14959460 intergenic not near genes chr3L_4_14955001 chr3L_14955001 RAL-492 1579 chr3L 15054566 15054613 chr3L 15054660 15054708 14 95 3.0 4.0 3.5 3.1 142 chr3L 15054566 intron Sytbeta - chr3L 15054637 intron Sytbeta - chr3L 15054708 intron Sytbeta - chr3L_14_15050001 chr3L_15050001 RAL-492 1580 chr3L 15085029 15085080 chr3L 15086215 15086263 1360 9 1175 0.5 2.0 1.2 4.1 1234 chr3L 15085029 intron cp309 - chr3L 15085646 intron cp309 - chr3L 15086263 intron cp309 - chr3L_9_15085001 chr3L_15085001 RAL-492 1581 chr3L 15094952 15094960 chr3L 15095068 15095076 4 116 4.5 2.5 3.5 0.9 124 chr3L 15094952 intergenic Aats-gly +,cp309 -,CG6945 - chr3L 15095014 intergenic Aats-gly +,cp309 -,CG6945 - chr3L 15095076 intergenic Aats-gly +,cp309 -,CG6945 - chr3L_4_15095001 chr3L_15095001 RAL-492 1582 chr3L 15193675 15193720 chr3L 15193864 15193909 12 188 4.5 3.0 3.8 2.5 234 chr3L 15193675 intergenic not near genes chr3L 15193792 intergenic not near genes chr3L 15193909 intergenic not near genes chr3L_12_15190001 chr3L_15190001 RAL-492 1583 chr3L 15216636 15216678 chr3L 15216724 15216772 14 86 7.0 12.0 9.5 1.3 136 chr3L 15216636 intergenic not near genes chr3L 15216704 intergenic not near genes chr3L 15216772 intergenic not near genes chr3L_14_15215001 chr3L_15215001 RAL-492 1584 chr3L 15219729 15219770 chr3L 15219830 15219870 4 101 4.5 5.0 4.8 0.7 141 chr3L 15219729 intergenic not near genes chr3L 15219800 intergenic not near genes chr3L 15219870 intergenic not near genes chr3L_4_15215001 chr3L_15215001 RAL-492 1585 chr3L 15264039 15264048 chr3L 15264136 15264145 5 97 0.0 0.0 0.0 5.0 106 chr3L 15264039 intergenic not near genes chr3L 15264092 intergenic not near genes chr3L 15264145 intergenic not near genes chr3L_5_15260001 chr3L_15260001 RAL-492 1586 chr3L 15291457 15291497 chr3L 15291557 15291603 15 103 5.5 2.0 3.8 3.1 146 chr3L 15291457 intergenic not near genes chr3L 15291530 intergenic not near genes chr3L 15291603 intergenic not near genes chr3L_15_15290001 chr3L_15290001 RAL-492 1587 chr3L 15295776 15295801 chr3L 15298614 15298664 gypsy5 4 2857 2.5 2.5 2.5 1.1 2888 chr3L 15295776 intergenic not near genes chr3L 15297220 intergenic not near genes chr3L 15298664 intergenic Best4 + chr3L_4_15295001 chr3L_15295001 RAL-492 1588 chr3L 15366662 15366692 chr3L 15366787 15366825 8 130 4.5 5.0 4.8 1.4 163 chr3L 15366662 intergenic not near genes chr3L 15366744 intergenic not near genes chr3L 15366825 intergenic not near genes chr3L_8_15365001 chr3L_15365001 RAL-492 1589 chr3L 15406002 15406049 chr3L 15406104 15406152 9 96 3.5 6.0 4.8 1.6 150 chr3L 15406002 intergenic not near genes chr3L 15406077 intergenic not near genes chr3L 15406152 intergenic not near genes chr3L_9_15405001 chr3L_15405001 RAL-492 1590 chr3L 15423743 15423760 chr3L 15426607 15426624 opus 5 2864 5.5 2.5 4.0 1.0 2881 chr3L 15423743 intergenic not near genes chr3L 15425184 intergenic not near genes chr3L 15426624 intergenic not near genes chr3L_5_15425001 chr3L_15425001 RAL-492 1591 chr3L 15444632 15444681 chr3L 15444743 15444762 13 104 8.5 3.0 5.8 1.9 130 chr3L 15444632 intergenic not near genes chr3L 15444697 intergenic not near genes chr3L 15444762 intergenic not near genes chr3L_13_15440001 chr3L_15440001 RAL-492 1592 chr3L 15466499 15466548 chr3L 15466603 15466651 7 104 3.0 2.5 2.8 1.8 152 chr3L 15466499 intergenic not near genes chr3L 15466575 intergenic not near genes chr3L 15466651 intergenic not near genes chr3L_7_15465001 chr3L_15465001 RAL-492 1593 chr3L 15472643 15472656 chr3L 15472730 15472753 4 94 7.5 15.5 11.5 0.3 110 chr3L 15472643 exon CG7804 - chr3L 15472698 exon CG7804 - chr3L 15472753 exon CG7804 - chr3L_4_15470001 chr3L_15470001 RAL-492 1594 chr3L 15541610 15541645 chr3L 15541721 15541756 5 111 5.0 2.0 3.5 1.1 146 chr3L 15541610 intron CrebA + chr3L 15541683 intron CrebA + chr3L 15541756 intron CrebA + chr3L_5_15540001 chr3L_15540001 RAL-492 1595 chr3L 15541927 15541971 chr3L 15542041 15542085 11 109 3.0 2.5 2.8 2.9 158 chr3L 15541927 intron CrebA + chr3L 15542006 intron CrebA + chr3L 15542085 intron CrebA + chr3L_11_15540001 chr3L_15540001 RAL-492 1596 chr3L 15629891 15629909 chr3L 15630034 15630053 8 144 3.5 4.0 3.8 1.7 162 chr3L 15629891 intron comm3 - chr3L 15629972 intron comm3 - chr3L 15630053 intron comm3 - chr3L_8_15625001 chr3L_15625001 RAL-492 1597 chr3L 15691409 15691443 chr3L 15691495 15691501 9 90 0.5 1.0 0.8 5.0 92 chr3L 15691409 intron CG34451 - chr3L 15691455 intron CG34451 - chr3L 15691501 intron CG34451 - chr3L_9_15690001 chr3L_15690001 RAL-492 1598 chr3L 15754467 15754613 chr3L 15754579 15754716 15 102 0.0 0.0 0.0 15.0 249 chr3L 15754467 intergenic not near genes chr3L 15754592 intergenic not near genes chr3L 15754716 intergenic not near genes chr3L_15_15750001 chr3L_15750001 RAL-492 1599 chr3L 15883173 15883224 chr3L 15883486 15883537 10 304 0.5 1.5 1.0 5.0 364 chr3L 15883173 intron pHCl - chr3L 15883355 intron pHCl - chr3L 15883537 intron pHCl - chr3L_10_15880001 chr3L_15880001 RAL-492 1600 chr3L 15899249 15899259 chr3L 15899785 15899830 jockey 5 554 1.0 1.0 1.0 2.5 581 chr3L 15899249 intergenic pHCl - chr3L 15899540 intergenic not near genes chr3L 15899830 intergenic sff - chr3L_5_15895001 chr3L_15895001 RAL-492 1601 chr3L 16070722 16070756 chr3L 16070819 16070853 9 97 1.0 2.5 1.8 3.2 131 chr3L 16070722 intron Mbs + chr3L 16070788 intron Mbs + chr3L 16070853 exon Mbs + chr3L_9_16070001 chr3L_16070001 RAL-492 1602 chr3L 16158805 16158836 chr3L 16158910 16158941 8 105 1.5 2.5 2.0 2.7 136 chr3L 16158805 intron CG5151 - chr3L 16158873 intron CG5151 - chr3L 16158941 intron CG5151 - chr3L_8_16155001 chr3L_16155001 RAL-492 1603 chr3L 16184088 16184136 chr3L 16188927 16188975 X-element 15 4834 3.0 1.5 2.2 4.7 4887 chr3L 16184088 intergenic not near genes chr3L 16186532 intergenic not near genes chr3L 16188975 intergenic not near genes chr3L_15_16185001 chr3L_16185001 RAL-492 1604 chr3L 16212795 16212840 chr3L 16212906 16212951 11 110 1.0 1.5 1.2 5.0 156 chr3L 16212795 intergenic CG13073 - chr3L 16212873 intergenic CG13073 - chr3L 16212951 intergenic CG13073 - chr3L_11_16210001 chr3L_16210001 RAL-492 1605 chr3L 16443828 16443873 chr3L 16446188 16446228 Doc 15 2357 2.5 6.5 4.5 2.7 2400 chr3L 16443828 intron,intron CG33158 +,dsx-c73A - chr3L 16445028 intron,intron CG33158 +,dsx-c73A - chr3L 16446228 intron,intron CG33158 +,dsx-c73A - chr3L_15_16445001 chr3L_16445001 RAL-492 1606 chr3L 16493958 16494010 chr3L 16494490 16494532 jockey 19 532 5.5 7.0 6.2 2.6 574 chr3L 16493958 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494245 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494532 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_19_16490001 chr3L_16490001 RAL-492 1607 chr3L 16533546 16533585 chr3L 16533676 16533716 8 130 2.0 4.5 3.2 1.9 170 chr3L 16533546 intron CG43373 - chr3L 16533631 intron CG43373 - chr3L 16533716 intron CG43373 - chr3L_8_16530001 chr3L_16530001 RAL-492 1608 chr3L 16616492 16616542 chr3L 16621839 16621890 297 12 5344 2.0 3.0 2.5 3.4 5398 chr3L 16616492 3` UTR Abl - chr3L 16619191 3` UTR Abl - chr3L 16621890 3` UTR Abl - chr3L_12_16615001 chr3L_16615001 RAL-492 1609 chr3L 16658289 16658315 chr3L 16658708 16658756 10 438 4.0 6.5 5.2 1.6 467 chr3L 16658289 intron Baldspot - chr3L 16658522 intron Baldspot - chr3L 16658756 intron Baldspot - chr3L_10_16655001 chr3L_16655001 RAL-492 1610 chr3L 16728076 16728106 chr3L 16728181 16728219 4 106 2.5 0.0 1.2 1.8 143 chr3L 16728076 intergenic PGRP-SB1 -,Dbp73D - chr3L 16728148 intergenic PGRP-SB1 -,Dbp73D - chr3L 16728219 intergenic PGRP-SB1 -,Dbp73D - chr3L_4_16725001 chr3L_16725001 RAL-492 1611 chr3L 16749188 16749234 chr3L 16749284 16749324 18 86 4.5 2.0 3.2 4.3 136 chr3L 16749188 intergenic not near genes chr3L 16749256 intergenic not near genes chr3L 16749324 intergenic not near genes chr3L_18_16745001 chr3L_16745001 RAL-492 1612 chr3L 16757624 16757665 chr3L 16757734 16757775 13 109 2.5 2.0 2.2 4.1 151 chr3L 16757624 intergenic not near genes chr3L 16757700 intergenic not near genes chr3L 16757775 intergenic not near genes chr3L_13_16755001 chr3L_16755001 RAL-492 1613 chr3L 16770452 16770475 chr3L 16770559 16770582 7 106 0.0 5.0 2.5 2.0 130 chr3L 16770452 intron Nrt + chr3L 16770517 intron Nrt + chr3L 16770582 intron Nrt + chr3L_7_16770001 chr3L_16770001 RAL-492 1614 chr3L 16808020 16808049 chr3L 16808116 16808145 4 96 4.0 0.5 2.2 1.2 125 chr3L 16808020 intron nudC + chr3L 16808082 intron nudC + chr3L 16808145 intron nudC + chr3L_4_16805001 chr3L_16805001 RAL-492 1615 chr3L 16815853 16815891 chr3L 16815946 16815994 8 102 0.0 4.0 2.0 2.7 141 chr3L 16815853 intron,intron nudC +,CG13024 - chr3L 16815924 intron,intron nudC +,CG13024 - chr3L 16815994 intron,intron nudC +,CG13024 - chr3L_8_16815001 chr3L_16815001 RAL-492 1616 chr3L 16818734 16818779 chr3L 16818825 16818875 14 95 7.5 4.5 6.0 2.0 141 chr3L 16818734 intron,intron nudC +,CG13024 - chr3L 16818804 intron,intron nudC +,CG13024 - chr3L 16818875 intron,intron nudC +,CG13024 - chr3L_14_16815001 chr3L_16815001 RAL-492 1617 chr3L 16830757 16830792 chr3L 16830860 16830886 5 98 5.0 2.0 3.5 1.1 129 chr3L 16830757 intergenic not near genes chr3L 16830822 intergenic not near genes chr3L 16830886 intergenic not near genes chr3L_5_16830001 chr3L_16830001 RAL-492 1618 chr3L 16836297 16836342 chr3L 16836409 16836454 8 111 2.0 0.0 1.0 4.0 157 chr3L 16836297 intergenic not near genes chr3L 16836376 intergenic not near genes chr3L 16836454 intergenic not near genes chr3L_8_16835001 chr3L_16835001 RAL-492 1619 chr3L 16845013 16845022 chr3L 16845146 16845155 4 132 6.5 6.0 6.2 0.6 142 chr3L 16845013 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845084 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845155 intergenic CG9669 -,CG9715 + chr3L_4_16845001 chr3L_16845001 RAL-492 1620 chr3L 16866189 16866240 chr3L 16866300 16866350 4 111 1.0 0.0 0.5 2.7 161 chr3L 16866189 intron Lmpt + chr3L 16866270 intron Lmpt + chr3L 16866350 intron Lmpt + chr3L_4_16865001 chr3L_16865001 RAL-492 1621 chr3L 16867546 16867564 chr3L 16867644 16867658 8 97 3.0 3.0 3.0 2.0 112 chr3L 16867546 intron Lmpt + chr3L 16867602 intron Lmpt + chr3L 16867658 intron Lmpt + chr3L_8_16865001 chr3L_16865001 RAL-492 1622 chr3L 16873339 16873359 chr3L 16873459 16873483 7 123 3.5 2.5 3.0 1.8 144 chr3L 16873339 intron Lmpt + chr3L 16873411 intron Lmpt + chr3L 16873483 intron Lmpt + chr3L_7_16870001 chr3L_16870001 RAL-492 1623 chr3L 16887615 16887652 chr3L 16887712 16887749 9 97 6.0 3.5 4.8 1.6 134 chr3L 16887615 intron Lmpt + chr3L 16887682 intron Lmpt + chr3L 16887749 intron Lmpt + chr3L_9_16885001 chr3L_16885001 RAL-492 1624 chr3L 16894950 16894974 chr3L 16895055 16895079 4 105 4.0 3.5 3.8 0.8 129 chr3L 16894950 intron Lmpt + chr3L 16895014 intron Lmpt + chr3L 16895079 intron Lmpt + chr3L_4_16895001 chr3L_16895001 RAL-492 1625 chr3L 16936656 16936694 chr3L 16940524 16940557 5 3867 34.5 29.0 31.8 0.2 3901 chr3L 16936656 intergenic not near genes chr3L 16938606 exon CG13022 - chr3L 16940557 exon Cpr73D - chr3L_5_16935001 chr3L_16935001 RAL-492 1626 chr3L 16945720 16945757 chr3L 16954880 16954891 roo 20 9158 2.0 3.5 2.8 5.3 9171 chr3L 16945720 exon Obp73a + chr3L 16950306 intergenic not near genes chr3L 16954891 5` UTR Nc73EF + chr3L_20_16950001 chr3L_16950001 RAL-492 1627 chr3L 17027373 17027423 chr3L 17027476 17027520 11 97 1.5 4.0 2.8 2.9 147 chr3L 17027373 intergenic CG7730 +,Fit2 + chr3L 17027446 intergenic CG7730 +,Fit2 + chr3L 17027520 5` UTR CG7730 + chr3L_11_17025001 chr3L_17025001 RAL-492 1628 chr3L 17032474 17032482 chr3L 17032572 17032618 4 123 2.0 3.0 2.5 1.1 144 chr3L 17032474 3` UTR CR45756 - chr3L 17032546 3` UTR CR45756 - chr3L 17032618 intergenic CR45756 -,CR43250 - chr3L_4_17030001 chr3L_17030001 RAL-492 1629 chr3L 17034914 17034947 chr3L 17035122 17035155 G2 4 208 3.0 2.0 2.5 1.1 241 chr3L 17034914 intergenic not near genes chr3L 17035034 intergenic not near genes chr3L 17035155 intergenic not near genes chr3L_4_17035001 chr3L_17035001 RAL-492 1630 chr3L 17084997 17085033 chr3L 17094161 17094202 roo 9 9168 4.5 9.0 6.8 1.2 9205 chr3L 17084997 intron Rbp6 - chr3L 17089600 intron Rbp6 - chr3L 17094202 intron Rbp6 - chr3L_9_17085001 chr3L_17085001 RAL-492 1631 chr3L 17120633 17120683 chr3L 17120729 17120779 18 94 2.0 3.0 2.5 5.1 146 chr3L 17120633 intron Rbp6 - chr3L 17120706 intron Rbp6 - chr3L 17120779 intron Rbp6 - chr3L_18_17120001 chr3L_17120001 RAL-492 1632 chr3L 17270573 17270620 chr3L 17271079 17271129 9 501 5.0 6.0 5.5 1.4 556 chr3L 17270573 intergenic not near genes chr3L 17270851 intergenic not near genes chr3L 17271129 intergenic not near genes chr3L_9_17270001 chr3L_17270001 RAL-492 1633 chr3L 17331056 17331097 chr3L 17331166 17331207 6 110 5.0 2.0 3.5 1.3 151 chr3L 17331056 intergenic not near genes chr3L 17331132 intergenic not near genes chr3L 17331207 intergenic not near genes chr3L_6_17330001 chr3L_17330001 RAL-492 1634 chr3L 17344613 17344643 chr3L 17344716 17344744 7 103 3.5 4.0 3.8 1.5 131 chr3L 17344613 exon brv2 - chr3L 17344678 5` UTR brv2 - chr3L 17344744 intergenic brv2 -,Mip - chr3L_7_17340001 chr3L_17340001 RAL-492 1635 chr3L 17386803 17386817 chr3L 17386888 17386900 5 86 4.5 5.0 4.8 0.9 97 chr3L 17386803 intron CG13731 - chr3L 17386852 intron CG13731 - chr3L 17386900 intron CG13731 - chr3L_5_17385001 chr3L_17385001 RAL-492 1636 chr3L 17386820 17386831 chr3L 17386887 17386909 5 78 1.5 5.0 3.2 1.2 89 chr3L 17386820 intron CG13731 - chr3L 17386864 intron CG13731 - chr3L 17386909 intron CG13731 - chr3L_5_17385001 chr3L_17385001 RAL-492 1637 chr3L 17492486 17492504 chr3L 17492788 17492818 7 319 3.0 1.5 2.2 2.2 332 chr3L 17492486 intron Oatp74D + chr3L 17492652 intron Oatp74D + chr3L 17492818 intron Oatp74D + chr3L_7_17490001 chr3L_17490001 RAL-492 1638 chr3L 17510736 17510766 chr3L 17510830 17510870 8 102 1.0 3.5 2.2 2.5 134 chr3L 17510736 exon Oatp74D + chr3L 17510803 intron Oatp74D + chr3L 17510870 intron Oatp74D + chr3L_8_17510001 chr3L_17510001 RAL-492 1639 chr3L 17516963 17516996 chr3L 17524540 17524574 412 6 7576 7.5 5.5 6.5 0.8 7611 chr3L 17516963 intron CG7564 + chr3L 17520768 intron CG7564 + chr3L 17524574 3` UTR CG7564 + chr3L_6_17520001 chr3L_17520001 RAL-492 1640 chr3L 17585349 17585361 chr3L 17585654 17585667 4 305 10.0 29.0 19.5 0.2 318 chr3L 17585349 intron Eip74EF - chr3L 17585508 intron Eip74EF - chr3L 17585667 intron Eip74EF - chr3L_4_17585001 chr3L_17585001 RAL-492 1641 chr3L 17592767 17592809 chr3L 17592878 17592920 8 111 4.0 3.0 3.5 1.8 153 chr3L 17592767 intron Eip74EF - chr3L 17592844 intron Eip74EF - chr3L 17592920 intron Eip74EF - chr3L_8_17590001 chr3L_17590001 RAL-492 1642 chr3L 17730836 17730872 chr3L 17738181 17738221 mdg1 7 7348 0.5 3.0 1.8 2.5 7385 chr3L 17730836 intron Ccn + chr3L 17734528 intron Ccn + chr3L 17738221 intron Ccn + chr3L_7_17730001 chr3L_17730001 RAL-492 1643 chr3L 17787666 17787690 chr3L 17787778 17787803 11 113 8.0 6.5 7.2 1.3 137 chr3L 17787666 intergenic not near genes chr3L 17787734 intergenic not near genes chr3L 17787803 intergenic not near genes chr3L_11_17785001 chr3L_17785001 RAL-492 1644 chr3L 17789829 17789870 chr3L 17789925 17789966 9 96 2.0 1.5 1.8 3.2 137 chr3L 17789829 intergenic not near genes chr3L 17789898 intergenic not near genes chr3L 17789966 intergenic not near genes chr3L_9_17785001 chr3L_17785001 RAL-492 1645 chr3L 17790600 17790620 chr3L 17790885 17790905 4 284 5.5 5.0 5.2 0.6 305 chr3L 17790600 intergenic CG42815 - chr3L 17790752 intergenic CG42815 - chr3L 17790905 intergenic CG42815 - chr3L_4_17790001 chr3L_17790001 RAL-492 1646 chr3L 17837604 17837655 chr3L 17837712 17837760 19 103 1.5 2.5 2.0 6.3 156 chr3L 17837604 exon Grd + chr3L 17837682 intron Grd + chr3L 17837760 exon Grd + chr3L_19_17835001 chr3L_17835001 RAL-492 1647 chr3L 17968119 17968167 chr3L 17968220 17968268 23 98 5.5 5.5 5.5 3.5 149 chr3L 17968119 intron Eip75B - chr3L 17968194 intron Eip75B - chr3L 17968268 intron Eip75B - chr3L_23_17965001 chr3L_17965001 RAL-492 1648 chr3L 17991571 17991587 chr3L 17991669 17991685 7 98 5.5 8.5 7.0 0.9 114 chr3L 17991571 intron Eip75B - chr3L 17991628 intron Eip75B - chr3L 17991685 intron Eip75B - chr3L_7_17990001 chr3L_17990001 RAL-492 1649 chr3L 18029941 18029963 chr3L 18030038 18030059 5 96 3.5 0.0 1.8 1.8 118 chr3L 18029941 intron Eip75B - chr3L 18030000 intron Eip75B - chr3L 18030059 intron Eip75B - chr3L_5_18030001 chr3L_18030001 RAL-492 1650 chr3L 18092763 18092788 chr3L 18092896 18092922 9 135 9.5 0.0 4.8 1.6 159 chr3L 18092763 intron CG13698 - chr3L 18092842 intron CG13698 - chr3L 18092922 intron CG13698 - chr3L_9_18090001 chr3L_18090001 RAL-492 1651 chr3L 18106238 18106274 chr3L 18106372 18106413 9 136 2.0 0.0 1.0 4.5 175 chr3L 18106238 intergenic CG13698 -,mRpS26 + chr3L 18106326 intergenic CG13698 -,mRpS26 + chr3L 18106413 intergenic mRpS26 +,CG13698 - chr3L_9_18105001 chr3L_18105001 RAL-492 1652 chr3L 18125681 18125722 chr3L 18125813 18125852 8 132 3.5 3.0 3.2 1.9 171 chr3L 18125681 intergenic not near genes chr3L 18125766 intergenic not near genes chr3L 18125852 intergenic not near genes chr3L_8_18125001 chr3L_18125001 RAL-492 1653 chr3L 18135733 18135745 chr3L 18135833 18135844 4 100 3.5 3.0 3.2 1.0 111 chr3L 18135733 intergenic CR44669 - chr3L 18135788 3` UTR CR44669 - chr3L 18135844 3` UTR CR44669 - chr3L_4_18135001 chr3L_18135001 RAL-492 1654 chr3L 18138596 18138622 chr3L 18138698 18138704 8 100 4.0 2.0 3.0 2.0 108 chr3L 18138596 intergenic not near genes chr3L 18138650 intergenic not near genes chr3L 18138704 intergenic not near genes chr3L_8_18135001 chr3L_18135001 RAL-492 1655 chr3L 18221091 18221121 chr3L 18221192 18221215 9 100 0.0 1.0 0.5 6.0 124 chr3L 18221091 intergenic not near genes chr3L 18221153 intergenic not near genes chr3L 18221215 intergenic not near genes chr3L_9_18220001 chr3L_18220001 RAL-492 1656 chr3L 18223145 18223188 chr3L 18223248 18223303 10 103 1.0 0.0 0.5 6.7 158 chr3L 18223145 intergenic not near genes chr3L 18223224 intergenic not near genes chr3L 18223303 intergenic not near genes chr3L_10_18220001 chr3L_18220001 RAL-492 1657 chr3L 18248955 18248978 chr3L 18249073 18249096 9 118 3.0 8.0 5.5 1.4 141 chr3L 18248955 intergenic not near genes chr3L 18249026 intergenic not near genes chr3L 18249096 intergenic not near genes chr3L_9_18245001 chr3L_18245001 RAL-492 1658 chr3L 18262453 18262468 chr3L 18262556 18262571 4 103 5.0 2.0 3.5 0.9 118 chr3L 18262453 intergenic not near genes chr3L 18262512 intergenic not near genes chr3L 18262571 intergenic not near genes chr3L_4_18260001 chr3L_18260001 RAL-492 1659 chr3L 18345076 18345126 chr3L 18345174 18345224 7 95 0.0 3.5 1.8 2.5 148 chr3L 18345076 intergenic not near genes chr3L 18345150 intergenic not near genes chr3L 18345224 intergenic not near genes chr3L_7_18345001 chr3L_18345001 RAL-492 1660 chr3L 18359583 18359625 chr3L 18359686 18359737 8 109 5.0 4.0 4.5 1.5 154 chr3L 18359583 intergenic not near genes chr3L 18359660 intergenic not near genes chr3L 18359737 intergenic not near genes chr3L_8_18355001 chr3L_18355001 RAL-492 1661 chr3L 9013689 9013693 chr3L 18417066 18417066 10 9403376 34.5 22.5 28.5 0.3 9403377 chr3L 9013689 intron Doc2 - chr3L 13715378 intron bru-3 - chr3L 18417066 intergenic not near genes chr3L_10_13715001 chr3L_13715001 RAL-492 1662 chr3L 18420051 18420061 chr3L 18420155 18420165 4 103 3.5 7.0 5.2 0.6 114 chr3L 18420051 intergenic not near genes chr3L 18420108 intergenic not near genes chr3L 18420165 intergenic not near genes chr3L_4_18420001 chr3L_18420001 RAL-492 1663 chr3L 18420064 18420092 chr3L 18420152 18420196 8 96 1.5 7.0 4.2 1.5 132 chr3L 18420064 intergenic not near genes chr3L 18420130 intergenic not near genes chr3L 18420196 intergenic not near genes chr3L_8_18420001 chr3L_18420001 RAL-492 1664 chr3L 18445231 18445268 chr3L 18445329 18445360 5 96 2.0 2.0 2.0 1.7 129 chr3L 18445231 intergenic not near genes chr3L 18445296 intergenic not near genes chr3L 18445360 intergenic not near genes chr3L_5_18445001 chr3L_18445001 RAL-492 1665 chr3L 18479256 18479259 chr3L 18479354 18479356 4 98 0.5 3.0 1.8 1.4 100 chr3L 18479256 intergenic CR44673 + chr3L 18479306 intergenic CR44673 + chr3L 18479356 intergenic CR44673 + chr3L_4_18475001 chr3L_18475001 RAL-492 1666 chr3L 18496467 18496488 chr3L 18499544 18499590 16 3079 26.5 28.0 27.2 0.6 3123 chr3L 18496467 intron AstC-R2 - chr3L 18498028 intron AstC-R2 - chr3L 18499590 intron AstC-R2 - chr3L_16_18495001 chr3L_18495001 RAL-492 1667 chr3L 18506122 18506156 chr3L 18509605 18509639 F-element 8 3482 6.0 4.0 5.0 1.3 3517 chr3L 18506122 intergenic not near genes chr3L 18507880 intergenic not near genes chr3L 18509639 intergenic not near genes chr3L_8_18505001 chr3L_18505001 RAL-492 1668 chr3L 18514877 18514941 chr3L 18520091 18520150 BS 5 5212 0.5 0.0 0.2 4.2 5273 chr3L 18514877 intergenic not near genes chr3L 18517514 intergenic not near genes chr3L 18520150 intergenic not near genes chr3L_5_18515001 chr3L_18515001 RAL-492 1669 chr3L 18528633 18528640 chr3L 18537837 18537844 roo 4 9204 5.5 3.0 4.2 0.8 9211 chr3L 18528633 intergenic not near genes chr3L 18533238 intergenic not near genes chr3L 18537844 intergenic not near genes chr3L_4_18530001 chr3L_18530001 RAL-492 1670 chr3L 18567005 18567052 chr3L 18567111 18567158 16 104 4.0 7.5 5.8 2.4 153 chr3L 18567005 intron AstC-R1 + chr3L 18567082 intron AstC-R1 + chr3L 18567158 intron AstC-R1 + chr3L_16_18565001 chr3L_18565001 RAL-492 1671 chr3L 18581323 18581359 chr3L 18581419 18581445 9 94 4.5 2.5 3.5 2.0 122 chr3L 18581323 intergenic not near genes chr3L 18581384 intergenic not near genes chr3L 18581445 intergenic not near genes chr3L_9_18580001 chr3L_18580001 RAL-492 1672 chr3L 18593932 18593947 chr3L 18595932 18595947 Doc 5 2000 6.0 0.5 3.2 1.2 2015 chr3L 18593932 intergenic term - chr3L 18594940 intergenic not near genes chr3L 18595947 intergenic CR45389 + chr3L_5_18590001 chr3L_18590001 RAL-492 1673 chr3L 18607826 18607857 chr3L 18607968 18607984 11 139 5.0 4.0 4.5 2.0 158 chr3L 18607826 intron,intron,exon CG13380 -,CG4174 -,CG18231 + chr3L 18607905 intron,intron,intron CG13380 -,CG4174 -,CG18231 + chr3L 18607984 intron,intron,intron CG13380 -,CG4174 -,CG18231 + chr3L_11_18605001 chr3L_18605001 RAL-492 1674 chr3L 18625354 18625392 chr3L 18625464 18625503 8 110 3.0 2.0 2.5 2.3 149 chr3L 18625354 intergenic not near genes chr3L 18625428 intergenic not near genes chr3L 18625503 intergenic MYPT-75D + chr3L_8_18625001 chr3L_18625001 RAL-492 1675 chr3L 18649636 18649642 chr3L 18650008 18650025 6 381 5.0 0.5 2.8 1.6 389 chr3L 18649636 intron MYPT-75D + chr3L 18649830 intron MYPT-75D + chr3L 18650025 intron MYPT-75D + chr3L_6_18645001 chr3L_18645001 RAL-492 1676 chr3L 18701114 18701153 chr3L 18701220 18701241 10 101 4.0 2.5 3.2 2.4 127 chr3L 18701114 intergenic not near genes chr3L 18701178 intergenic not near genes chr3L 18701241 intergenic not near genes chr3L_10_18700001 chr3L_18700001 RAL-492 1677 chr3L 18710744 18710781 chr3L 18718716 18718753 Stalker2 6 7971 3.5 3.0 3.2 1.4 8009 chr3L 18710744 intergenic not near genes chr3L 18714748 intergenic not near genes chr3L 18718753 intergenic not near genes chr3L_6_18710001 chr3L_18710001 RAL-492 1678 chr3L 18721761 18721798 chr3L 18721869 18721909 9 109 4.0 3.5 3.8 1.9 148 chr3L 18721761 intergenic CG12477 - chr3L 18721835 intergenic CG12477 - chr3L 18721909 3` UTR CG12477 - chr3L_9_18720001 chr3L_18720001 RAL-492 1679 chr3L 18729902 18729912 chr3L 18730000 18730009 5 98 5.5 3.0 4.2 1.0 107 chr3L 18729902 intergenic not near genes chr3L 18729956 intergenic not near genes chr3L 18730009 intergenic not near genes chr3L_5_18725001 chr3L_18725001 RAL-492 1680 chr3L 18729920 18729949 chr3L 18729995 18730016 6 70 2.5 3.0 2.8 1.6 96 chr3L 18729920 intergenic not near genes chr3L 18729968 intergenic not near genes chr3L 18730016 intergenic not near genes chr3L_6_18725001 chr3L_18725001 RAL-492 1681 chr3L 18772392 18772425 chr3L 18781093 18781126 roo 12 8701 6.5 6.5 6.5 1.6 8734 chr3L 18772392 intron ftz-f1 - chr3L 18776759 intron ftz-f1 - chr3L 18781126 intron ftz-f1 - chr3L_12_18775001 chr3L_18775001 RAL-492 1682 chr3L 18784375 18784406 chr3L 18784484 18784515 5 109 3.5 0.5 2.0 1.7 140 chr3L 18784375 intron ftz-f1 - chr3L 18784445 intron ftz-f1 - chr3L 18784515 intron ftz-f1 - chr3L_5_18780001 chr3L_18780001 RAL-492 1683 chr3L 18792551 18792605 chr3L 18792653 18792707 9 101 1.0 2.0 1.5 3.6 156 chr3L 18792551 intron ftz-f1 - chr3L 18792629 intron ftz-f1 - chr3L 18792707 intron ftz-f1 - chr3L_9_18790001 chr3L_18790001 RAL-492 1684 chr3L 18833765 18833799 chr3L 18834947 18834983 1360 14 1180 3.0 4.0 3.5 3.1 1218 chr3L 18833765 intron Indy - chr3L 18834374 intron Indy - chr3L 18834983 intron Indy - chr3L_14_18830001 chr3L_18830001 RAL-492 1685 chr3L 18839715 18839765 chr3L 18839818 18839864 20 102 1.5 4.5 3.0 5.0 149 chr3L 18839715 intron Indy - chr3L 18839790 intron Indy - chr3L 18839864 intron Indy - chr3L_20_18835001 chr3L_18835001 RAL-492 1686 chr3L 18868954 18868997 chr3L 18869055 18869098 7 101 1.5 0.5 1.0 3.5 144 chr3L 18868954 3` UTR Dysb + chr3L 18869026 3` UTR Dysb + chr3L 18869098 3` UTR Dysb + chr3L_7_18865001 chr3L_18865001 RAL-492 1687 chr3L 18896764 18896785 chr3L 18896916 18896916 7 150 2.0 4.5 3.2 1.7 152 chr3L 18896764 intron CG3902 - chr3L 18896840 intron CG3902 - chr3L 18896916 intron CG3902 - chr3L_7_18895001 chr3L_18895001 RAL-492 1688 chr3L 18929943 18929986 chr3L 18930040 18930090 11 99 2.0 1.0 1.5 4.4 147 chr3L 18929943 intron CG32204 - chr3L 18930016 intron CG32204 - chr3L 18930090 exon CG32204 - chr3L_11_18930001 chr3L_18930001 RAL-492 1689 chr3L 18933609 18933659 chr3L 18933723 18933770 11 113 2.5 4.0 3.2 2.6 161 chr3L 18933609 intron CG32204 - chr3L 18933690 intron CG32204 - chr3L 18933770 intron CG32204 - chr3L_11_18930001 chr3L_18930001 RAL-492 1690 chr3L 18957283 18957323 chr3L 18957381 18957422 12 95 2.5 6.5 4.5 2.2 139 chr3L 18957283 intergenic not near genes chr3L 18957352 intergenic not near genes chr3L 18957422 intergenic not near genes chr3L_12_18955001 chr3L_18955001 RAL-492 1691 chr3L 18969538 18969541 chr3L 18969633 18969635 4 94 5.5 7.0 6.2 0.6 97 chr3L 18969538 intergenic not near genes chr3L 18969586 intergenic not near genes chr3L 18969635 intergenic not near genes chr3L_4_18965001 chr3L_18965001 RAL-492 1692 chr3L 18969545 18969569 chr3L 18969628 18969665 9 93 4.5 6.0 5.2 1.5 120 chr3L 18969545 intergenic not near genes chr3L 18969605 intergenic not near genes chr3L 18969665 intergenic not near genes chr3L_9_18965001 chr3L_18965001 RAL-492 1693 chr3L 19008830 19008870 chr3L 19009187 19009228 jockey 11 357 4.5 6.0 5.2 1.8 398 chr3L 19008830 intron nkd - chr3L 19009029 intron nkd - chr3L 19009228 intron nkd - chr3L_11_19005001 chr3L_19005001 RAL-492 1694 chr3L 19015168 19015217 chr3L 19015272 19015317 7 103 0.0 4.5 2.2 2.2 149 chr3L 19015168 intron nkd - chr3L 19015242 intron nkd - chr3L 19015317 intron nkd - chr3L_7_19015001 chr3L_19015001 RAL-492 1695 chr3L 19090739 19090759 chr3L 19090814 19090861 7 90 5.0 6.0 5.5 1.1 122 chr3L 19090739 5` UTR CR45386 + chr3L 19090800 5` UTR CR45386 + chr3L 19090861 5` UTR CR45386 + chr3L_7_19090001 chr3L_19090001 RAL-492 1696 chr3L 19115621 19115625 chr3L 19115821 19115825 BS 4 200 12.0 3.5 7.8 0.5 204 chr3L 19115621 intron CG14082 - chr3L 19115723 intron CG14082 - chr3L 19115825 intron CG14082 - chr3L_4_19115001 chr3L_19115001 RAL-492 1697 chr3L 19115626 19115636 chr3L 19115820 19115836 BS 5 197 10.0 3.5 6.8 0.6 210 chr3L 19115626 intron CG14082 - chr3L 19115731 intron CG14082 - chr3L 19115836 intron CG14082 - chr3L_5_19115001 chr3L_19115001 RAL-492 1698 chr3L 19117022 19117074 chr3L 19124487 19124541 mdg1 24 7463 4.5 6.0 5.2 3.9 7519 chr3L 19117022 intron CG14082 - chr3L 19120782 intron CG14082 - chr3L 19124541 intron CG14082 - chr3L_24_19120001 chr3L_19120001 RAL-492 1699 chr3L 19182368 19182419 chr3L 19182469 19182507 10 98 1.5 3.0 2.2 3.1 139 chr3L 19182368 intron fz2 - chr3L 19182438 intron fz2 - chr3L 19182507 intron fz2 - chr3L_10_19180001 chr3L_19180001 RAL-492 1700 chr3L 19186922 19186976 chr3L 19187038 19187092 11 116 1.5 3.0 2.2 3.4 170 chr3L 19186922 intron fz2 - chr3L 19187007 intron fz2 - chr3L 19187092 intron fz2 - chr3L_11_19185001 chr3L_19185001 RAL-492 1701 chr3L 19208041 19208082 chr3L 19209435 19209476 Doc 11 1393 7.0 2.5 4.8 1.9 1435 chr3L 19208041 intron fz2 - chr3L 19208758 intron fz2 - chr3L 19209476 intron fz2 - chr3L_11_19205001 chr3L_19205001 RAL-492 1702 chr3L 9307795 9307796 chr3L 19220637 19220637 4 9912842 17.5 19.0 18.2 0.2 9912842 chr3L 9307795 intergenic not near genes chr3L 14264216 intergenic not near genes chr3L 19220637 intron fz2 - chr3L_4_14260001 chr3L_14260001 RAL-492 1703 chr3L 19238715 19238750 chr3L 19238842 19238876 9 126 1.5 2.0 1.8 3.2 161 chr3L 19238715 intergenic not near genes chr3L 19238796 intergenic not near genes chr3L 19238876 intergenic not near genes chr3L_9_19235001 chr3L_19235001 RAL-492 1704 chr3L 19262198 19262244 chr3L 19262300 19262337 5 100 3.5 4.0 3.8 1.0 139 chr3L 19262198 3` UTR Bet1 + chr3L 19262268 3` UTR,3` UTR Bet1 +,Max - chr3L 19262337 3` UTR,3` UTR Bet1 +,Max - chr3L_5_19260001 chr3L_19260001 RAL-492 1705 chr3L 19263218 19263255 chr3L 19263399 19263428 15 178 5.0 2.5 3.8 3.1 210 chr3L 19263218 intron Max - chr3L 19263323 intron Max - chr3L 19263428 exon Max - chr3L_15_19260001 chr3L_19260001 RAL-492 1706 chr3L 19274163 19274211 chr3L 19274261 19274277 7 90 3.0 5.0 4.0 1.4 114 chr3L 19274163 3` UTR CG14085 + chr3L 19274220 intergenic CG14085 + chr3L 19274277 intergenic CG14085 + chr3L_7_19270001 chr3L_19270001 RAL-492 1707 chr3L 19335722 19335771 chr3L 19335829 19335858 11 103 5.0 3.5 4.2 2.1 136 chr3L 19335722 intron pip - chr3L 19335790 intron pip - chr3L 19335858 intron pip - chr3L_11_19335001 chr3L_19335001 RAL-492 1708 chr3L 19342742 19342768 chr3L 19342853 19342879 11 110 1.5 1.5 1.5 4.4 137 chr3L 19342742 3` UTR CG32206 - chr3L 19342810 3` UTR CG32206 - chr3L 19342879 3` UTR CG32206 - chr3L_11_19340001 chr3L_19340001 RAL-492 1709 chr3L 19360114 19360151 chr3L 19360203 19360247 4 93 2.5 2.0 2.2 1.2 133 chr3L 19360114 intron CG32206 - chr3L 19360180 intron CG32206 - chr3L 19360247 intron CG32206 - chr3L_4_19360001 chr3L_19360001 RAL-492 1710 chr3L 19365918 19365924 chr3L 19366012 19366040 4 111 0.0 4.0 2.0 1.3 122 chr3L 19365918 intron CG32206 - chr3L 19365979 intron CG32206 - chr3L 19366040 intron CG32206 - chr3L_4_19365001 chr3L_19365001 RAL-492 1711 chr3L 19417797 19417834 chr3L 19417878 19417913 5 92 3.5 4.0 3.8 1.0 116 chr3L 19417797 intergenic not near genes chr3L 19417855 intergenic not near genes chr3L 19417913 intergenic not near genes chr3L_5_19415001 chr3L_19415001 RAL-492 1712 chr3L 19527910 19527926 chr3L 19528009 19528025 5 99 9.0 3.0 6.0 0.7 115 chr3L 19527910 intergenic not near genes chr3L 19527968 intergenic not near genes chr3L 19528025 intergenic not near genes chr3L_5_19525001 chr3L_19525001 RAL-492 1713 chr3L 19527928 19527954 chr3L 19528001 19528053 4 92 5.0 3.5 4.2 0.8 125 chr3L 19527928 intergenic not near genes chr3L 19527990 intergenic not near genes chr3L 19528053 intergenic not near genes chr3L_4_19525001 chr3L_19525001 RAL-492 1714 chr3L 19554835 19554847 chr3L 19554948 19554961 4 114 3.0 3.5 3.2 1.0 126 chr3L 19554835 intergenic CG9300 + chr3L 19554898 intergenic CG9300 + chr3L 19554961 intergenic CG9300 + chr3L_4_19550001 chr3L_19550001 RAL-492 1715 chr3L 19792351 19792373 chr3L 19792458 19792458 6 109 3.0 2.5 2.8 1.6 107 chr3L 19792351 intron,intron CG42637 -,Gyc76C - chr3L 19792404 intron,intron CG42637 -,Gyc76C - chr3L 19792458 intron,intron CG42637 -,Gyc76C - chr3L_6_19790001 chr3L_19790001 RAL-492 1716 chr3L 19848488 19848526 chr3L 19857698 19857736 roo 12 9204 3.0 3.0 3.0 3.0 9248 chr3L 19848488 intron Papss + chr3L 19853112 intron Papss + chr3L 19857736 intron Papss + chr3L_12_19850001 chr3L_19850001 RAL-492 1717 chr3L 19861805 19861850 chr3L 19863613 19863658 S-element 13 1808 4.0 2.5 3.2 3.1 1853 chr3L 19861805 5` UTR CR45433 + chr3L 19862732 intergenic not near genes chr3L 19863658 intergenic not near genes chr3L_13_19860001 chr3L_19860001 RAL-492 1718 chr3L 19932460 19932488 chr3L 19932557 19932584 5 92 8.0 10.0 9.0 0.5 124 chr3L 19932460 3` UTR RhoGDI + chr3L 19932522 3` UTR RhoGDI + chr3L 19932584 3` UTR RhoGDI + chr3L_5_19930001 chr3L_19930001 RAL-492 1719 chr3L 19960836 19960866 chr3L 19961508 19961551 5 675 2.5 6.5 4.5 0.9 715 chr3L 19960836 intron Ac76E + chr3L 19961194 intron Ac76E + chr3L 19961551 intron Ac76E + chr3L_5_19960001 chr3L_19960001 RAL-492 1720 chr3L 19981188 19981231 chr3L 19981283 19981302 13 97 4.5 1.5 3.0 3.2 114 chr3L 19981188 intergenic CG17732 + chr3L 19981245 intergenic CG17732 + chr3L 19981302 intergenic CG17732 + chr3L_13_19980001 chr3L_19980001 RAL-492 1721 chr3L 20057544 20057587 chr3L 20057677 20057720 14 129 3.5 4.5 4.0 2.8 176 chr3L 20057544 intergenic not near genes chr3L 20057632 intergenic not near genes chr3L 20057720 intergenic not near genes chr3L_14_20055001 chr3L_20055001 RAL-492 1722 chr3L 20081729 20081760 chr3L 20081830 20081863 7 101 4.5 2.5 3.5 1.6 134 chr3L 20081729 intron sNPF-R - chr3L 20081796 intron sNPF-R - chr3L 20081863 intron sNPF-R - chr3L_7_20080001 chr3L_20080001 RAL-492 1723 chr3L 20086777 20086816 chr3L 20086872 20086914 6 97 3.0 2.0 2.5 1.7 137 chr3L 20086777 intron sNPF-R - chr3L 20086846 intron sNPF-R - chr3L 20086914 intron sNPF-R - chr3L_6_20085001 chr3L_20085001 RAL-492 1724 chr3L 20096243 20096279 chr3L 20096371 20096407 10 124 1.5 4.5 3.0 2.5 164 chr3L 20096243 intergenic not near genes chr3L 20096325 intergenic not near genes chr3L 20096407 intergenic not near genes chr3L_10_20095001 chr3L_20095001 RAL-492 1725 chr3L 20113653 20113680 chr3L 20122930 20122957 roo 7 9277 3.5 2.0 2.8 1.8 9304 chr3L 20113653 intergenic not near genes chr3L 20118305 intergenic not near genes chr3L 20122957 intergenic not near genes chr3L_7_20115001 chr3L_20115001 RAL-492 1726 chr3L 20143068 20143112 chr3L 20143168 20143173 10 94 5.5 2.5 4.0 2.0 105 chr3L 20143068 intergenic not near genes chr3L 20143120 intergenic not near genes chr3L 20143173 intergenic not near genes chr3L_10_20140001 chr3L_20140001 RAL-492 1727 chr3L 20150721 20150755 chr3L 20150872 20150906 4 144 0.5 1.5 1.0 2.0 185 chr3L 20150721 3` UTR CG42674 - chr3L 20150814 3` UTR CG42674 - chr3L 20150906 3` UTR CG42674 - chr3L_4_20150001 chr3L_20150001 RAL-492 1728 chr3L 20166196 20166232 chr3L 20166306 20166341 10 109 1.5 5.0 3.2 2.4 145 chr3L 20166196 intron CG42674 - chr3L 20166268 intron CG42674 - chr3L 20166341 intron CG42674 - chr3L_10_20165001 chr3L_20165001 RAL-492 1729 chr3L 20257319 20257355 chr3L 20258458 20258494 pogo 17 1137 5.0 10.0 7.5 2.0 1175 chr3L 20257319 intron rdgC + chr3L 20257906 intron rdgC + chr3L 20258494 intron rdgC + chr3L_17_20255001 chr3L_20255001 RAL-492 1730 chr3L 20345593 20345638 chr3L 20345691 20345735 13 99 7.5 6.0 6.8 1.7 142 chr3L 20345593 intergenic Rbbp5 - chr3L 20345664 intergenic Rbbp5 - chr3L 20345735 3` UTR Rbbp5 - chr3L_13_20345001 chr3L_20345001 RAL-492 1731 chr3L 20386936 20386956 chr3L 20387058 20387078 8 122 7.0 4.0 5.5 1.2 142 chr3L 20386936 intron fbl + chr3L 20387007 intron fbl + chr3L 20387078 intron fbl + chr3L_8_20385001 chr3L_20385001 RAL-492 1732 chr3L 20386962 20386972 chr3L 20387040 20387094 5 113 4.0 2.0 3.0 1.2 132 chr3L 20386962 intron fbl + chr3L 20387028 intron fbl + chr3L 20387094 intron fbl + chr3L_5_20385001 chr3L_20385001 RAL-492 1733 chr3L 20406697 20406733 chr3L 20406884 20406895 16 185 4.0 4.5 4.2 3.1 198 chr3L 20406697 intergenic CG13248 - chr3L 20406796 intergenic CG13248 - chr3L 20406895 intergenic CG13248 - chr3L_16_20405001 chr3L_20405001 RAL-492 1734 chr3L 20451257 20451282 chr3L 20451518 20451543 8 261 7.5 3.5 5.5 1.2 286 chr3L 20451257 exon CG5199 - chr3L 20451400 intron CG5199 - chr3L 20451543 intron CG5199 - chr3L_8_20450001 chr3L_20450001 RAL-492 1735 chr3L 20476736 20476781 chr3L 20484355 20484400 springer 9 7619 2.0 2.5 2.2 2.8 7664 chr3L 20476736 3` UTR isoQC + chr3L 20480568 intergenic not near genes chr3L 20484400 3` UTR ZnT77C - chr3L_9_20480001 chr3L_20480001 RAL-492 1736 chr3L 20590083 20590092 chr3L 20590606 20590628 412 4 536 7.0 3.5 5.2 0.6 545 chr3L 20590083 intergenic not near genes chr3L 20590356 intergenic not near genes chr3L 20590628 intergenic not near genes chr3L_4_20590001 chr3L_20590001 RAL-492 1737 chr3L 20710750 20710792 chr3L 20710842 20710867 5 91 2.5 5.5 4.0 1.0 117 chr3L 20710750 intergenic not near genes chr3L 20710808 intergenic not near genes chr3L 20710867 intergenic not near genes chr3L_5_20710001 chr3L_20710001 RAL-492 1738 chr3L 20821275 20821295 chr3L 20824764 20824784 NOF 6 3489 3.0 6.5 4.8 1.0 3509 chr3L 20821275 intron Pka-R1 + chr3L 20823030 intron Pka-R1 + chr3L 20824784 intron Pka-R1 + chr3L_6_20820001 chr3L_20820001 RAL-492 1739 chr3L 20826306 20826356 chr3L 20826544 20826563 12 227 5.0 6.5 5.8 1.8 257 chr3L 20826306 intron Pka-R1 + chr3L 20826434 intron Pka-R1 + chr3L 20826563 intron Pka-R1 + chr3L_12_20825001 chr3L_20825001 RAL-492 1740 chr3L 20849251 20849299 chr3L 20849350 20849396 13 97 5.5 6.0 5.8 1.9 145 chr3L 20849251 intron CG32432 - chr3L 20849324 intron CG32432 - chr3L 20849396 intron CG32432 - chr3L_13_20845001 chr3L_20845001 RAL-492 1741 chr3L 20863588 20863627 chr3L 20863799 20863838 11 206 6.0 6.0 6.0 1.6 250 chr3L 20863588 intron CG32432 - chr3L 20863713 intron CG32432 - chr3L 20863838 intron CG32432 - chr3L_11_20860001 chr3L_20860001 RAL-492 1742 chr3L 20864644 20864672 chr3L 20864723 20864772 5 90 5.0 3.0 4.0 1.0 128 chr3L 20864644 intron CG32432 - chr3L 20864708 intron CG32432 - chr3L 20864772 intron CG32432 - chr3L_5_20860001 chr3L_20860001 RAL-492 1743 chr3L 20890500 20890521 chr3L 20890566 20890595 6 79 8.5 4.5 6.5 0.8 95 chr3L 20890500 intergenic not near genes chr3L 20890548 intergenic not near genes chr3L 20890595 intergenic not near genes chr3L_6_20890001 chr3L_20890001 RAL-492 1744 chr3L 20896908 20896930 chr3L 20897006 20897024 4 94 6.5 3.5 5.0 0.7 116 chr3L 20896908 3` UTR Sfp77F - chr3L 20896966 3` UTR Sfp77F - chr3L 20897024 3` UTR Sfp77F - chr3L_4_20895001 chr3L_20895001 RAL-492 1745 chr3L 20917074 20917090 chr3L 20917171 20917186 6 95 11.0 7.5 9.2 0.6 112 chr3L 20917074 intergenic not near genes chr3L 20917130 intergenic not near genes chr3L 20917186 intergenic not near genes chr3L_6_20915001 chr3L_20915001 RAL-492 1746 chr3L 20917092 20917119 chr3L 20917168 20917216 10 92 6.0 7.0 6.5 1.3 124 chr3L 20917092 intergenic not near genes chr3L 20917154 intergenic not near genes chr3L 20917216 intergenic not near genes chr3L_10_20915001 chr3L_20915001 RAL-492 1747 chr3L 20964607 20964649 chr3L 20964689 20964728 17 89 7.0 5.0 6.0 2.4 121 chr3L 20964607 3` UTR CG12983 - chr3L 20964668 3` UTR CG12983 - chr3L 20964728 3` UTR CG12983 - chr3L_17_20960001 chr3L_20960001 RAL-492 1748 chr3L 20977394 20977447 chr3L 20977540 20977572 15 136 5.5 9.0 7.2 1.8 178 chr3L 20977394 intergenic not near genes chr3L 20977483 intergenic not near genes chr3L 20977572 intergenic not near genes chr3L_15_20975001 chr3L_20975001 RAL-492 1749 chr3L 21010360 21010393 chr3L 21010487 21010521 6 127 4.0 4.0 4.0 1.2 161 chr3L 21010360 intron skd - chr3L 21010440 intron skd - chr3L 21010521 intron skd - chr3L_6_21010001 chr3L_21010001 RAL-492 1750 chr3L 21014899 21014943 chr3L 21023394 21023439 Tirant 12 8489 6.0 2.5 4.2 2.3 8540 chr3L 21014899 intron skd - chr3L 21019169 intron skd - chr3L 21023439 intron skd - chr3L_12_21015001 chr3L_21015001 RAL-492 1751 chr3L 21057121 21057156 chr3L 21057356 21057392 16 233 4.0 1.5 2.8 4.2 271 chr3L 21057121 intron siz + chr3L 21057256 intron siz + chr3L 21057392 intron siz + chr3L_16_21055001 chr3L_21055001 RAL-492 1752 chr3L 21067935 21067981 chr3L 21068035 21068073 16 94 2.0 5.0 3.5 3.6 138 chr3L 21067935 intron siz + chr3L 21068004 intron siz + chr3L 21068073 intron siz + chr3L_16_21065001 chr3L_21065001 RAL-492 1753 chr3L 21082221 21082240 chr3L 21082287 21082336 4 90 0.5 2.0 1.2 1.8 115 chr3L 21082221 intron ko - chr3L 21082278 intron ko - chr3L 21082336 intron ko - chr3L_4_21080001 chr3L_21080001 RAL-492 1754 chr3L 21150911 21150959 chr3L 21151067 21151115 16 152 4.5 2.0 3.2 3.8 204 chr3L 21150911 intron Ac78C - chr3L 21151013 intron Ac78C - chr3L 21151115 intron Ac78C - chr3L_16_21150001 chr3L_21150001 RAL-492 1755 chr3L 21151858 21151894 chr3L 21156955 21156998 flea 8 5103 5.5 3.0 4.2 1.5 5140 chr3L 21151858 intron Ac78C - chr3L 21154428 intron Ac78C - chr3L 21156998 intron Ac78C - chr3L_8_21150001 chr3L_21150001 RAL-492 1756 chr3L 21160951 21160992 chr3L 21161059 21161102 13 108 2.0 6.0 4.0 2.6 151 chr3L 21160951 5` UTR Ac78C - chr3L 21161026 intron Ac78C - chr3L 21161102 intron Ac78C - chr3L_13_21160001 chr3L_21160001 RAL-492 1757 chr3L 21170065 21170088 chr3L 21170283 21170334 12 230 3.5 7.0 5.2 1.9 269 chr3L 21170065 intron Ac78C - chr3L 21170200 intron Ac78C - chr3L 21170334 intron Ac78C - chr3L_12_21170001 chr3L_21170001 RAL-492 1758 chr3L 21274190 21274237 chr3L 21274381 21274428 10 186 2.5 6.0 4.2 1.9 238 chr3L 21274190 intron AcCoAS - chr3L 21274309 intron AcCoAS - chr3L 21274428 intron AcCoAS - chr3L_10_21270001 chr3L_21270001 RAL-492 1759 chr3L 21306133 21306167 chr3L 21315310 21315346 roo 17 9179 5.0 2.5 3.8 3.5 9213 chr3L 21306133 3` UTR CG7632 + chr3L 21310740 intron Pc - chr3L 21315346 3` UTR Pc - chr3L_17_21310001 chr3L_21310001 RAL-492 1760 chr3L 21319517 21319558 chr3L 21319624 21319666 16 107 4.5 4.5 4.5 2.9 149 chr3L 21319517 5` UTR Rab26 + chr3L 21319592 5` UTR Rab26 + chr3L 21319666 5` UTR Rab26 + chr3L_16_21315001 chr3L_21315001 RAL-492 1761 chr3L 21415129 21415164 chr3L 21415222 21415266 11 98 4.0 6.5 5.2 1.8 137 chr3L 21415129 intron rgn + chr3L 21415198 intron rgn + chr3L 21415266 intron rgn + chr3L_11_21415001 chr3L_21415001 RAL-492 1762 chr3L 21498830 21498865 chr3L 21500472 21500497 1360 8 1640 4.5 7.0 5.8 1.2 1667 chr3L 21498830 5` UTR,intron CR43933 +,Glg1 - chr3L 21499664 intron Glg1 - chr3L 21500497 intron Glg1 - chr3L_8_21495001 chr3L_21495001 RAL-492 1763 chr3L 21664429 21664465 chr3L 21664588 21664624 8 159 3.0 2.5 2.8 2.1 195 chr3L 21664429 exon CG43980 + chr3L 21664526 intron CG43980 + chr3L 21664624 intron CG43980 + chr3L_8_21660001 chr3L_21660001 RAL-492 1764 chr3L 21749299 21749331 chr3L 21754479 21754498 Doc 11 5173 7.5 3.5 5.5 1.7 5199 chr3L 21749299 intron Syn1 - chr3L 21751898 intron Syn1 - chr3L 21754498 intron Syn1 - chr3L_11_21750001 chr3L_21750001 RAL-492 1765 chr3L 21769037 21769085 chr3L 21769144 21769192 8 106 2.0 4.5 3.2 1.9 155 chr3L 21769037 intron,intron Syn1 -,CG42689 + chr3L 21769114 intron,intron Syn1 -,CG42689 + chr3L 21769192 intron,intron Syn1 -,CG42689 + chr3L_8_21765001 chr3L_21765001 RAL-492 1766 chr3L 21770021 21770039 chr3L 21770127 21770144 4 103 9.5 4.0 6.8 0.5 123 chr3L 21770021 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L 21770082 5` UTR,intron,intron Syn1 -,CG42689 +,CG7370 + chr3L 21770144 5` UTR,intron,intron Syn1 -,CG42689 +,CG7370 + chr3L_4_21770001 chr3L_21770001 RAL-492 1767 chr3L 21776667 21776703 chr3L 21776774 21776810 12 106 0.5 4.0 2.2 3.8 143 chr3L 21776667 intron,intron CG42689 +,CG42552 + chr3L 21776738 intron,intron CG42689 +,CG42552 + chr3L 21776810 intron,intron CG42689 +,CG42552 + chr3L_12_21775001 chr3L_21775001 RAL-492 1768 chr3L 21809957 21809970 chr3L 21810065 21810070 4 105 7.0 17.5 12.2 0.3 113 chr3L 21809957 intron eg + chr3L 21810014 intron eg + chr3L 21810070 intron eg + chr3L_4_21810001 chr3L_21810001 RAL-492 1769 chr3L 21836722 21836757 chr3L 21836828 21836848 7 103 2.5 5.5 4.0 1.4 126 chr3L 21836722 3` UTR P5CDh1 - chr3L 21836785 3` UTR P5CDh1 - chr3L 21836848 3` UTR P5CDh1 - chr3L_7_21835001 chr3L_21835001 RAL-492 1770 chr3L 21849490 21849520 chr3L 21849590 21849622 10 101 9.0 7.0 8.0 1.1 132 chr3L 21849490 intron mub + chr3L 21849556 intron mub + chr3L 21849622 intron mub + chr3L_10_21845001 chr3L_21845001 RAL-492 1771 chr3L 21849521 21849532 chr3L 21849580 21849633 5 93 5.5 2.0 3.8 1.0 112 chr3L 21849521 intron mub + chr3L 21849577 intron mub + chr3L 21849633 intron mub + chr3L_5_21845001 chr3L_21845001 RAL-492 1772 chr3L 21852257 21852284 chr3L 21852348 21852393 11 106 3.0 3.0 3.0 2.8 136 chr3L 21852257 intron mub + chr3L 21852325 intron mub + chr3L 21852393 intron mub + chr3L_11_21850001 chr3L_21850001 RAL-492 1773 chr3L 21874980 21874997 chr3L 21875157 21875174 4 177 2.0 2.0 2.0 1.3 194 chr3L 21874980 intron mub + chr3L 21875077 intron mub + chr3L 21875174 intron mub + chr3L_4_21875001 chr3L_21875001 RAL-492 1774 chr3L 21901009 21901044 chr3L 21901122 21901157 14 108 3.0 4.0 3.5 3.1 148 chr3L 21901009 intron mub + chr3L 21901083 intron mub + chr3L 21901157 intron mub + chr3L_14_21900001 chr3L_21900001 RAL-492 1775 chr3L 21952437 21952474 chr3L 21953196 21953237 transib1 5 761 2.0 4.5 3.2 1.2 800 chr3L 21952437 intergenic not near genes chr3L 21952837 intergenic not near genes chr3L 21953237 intergenic not near genes chr3L_5_21950001 chr3L_21950001 RAL-492 1776 chr3L 22016364 22016395 chr3L 22016494 22016496 7 128 4.0 7.0 5.5 1.1 132 chr3L 22016364 intergenic not near genes chr3L 22016430 intergenic not near genes chr3L 22016496 intergenic not near genes chr3L_7_22015001 chr3L_22015001 RAL-492 1777 chr3L 22033668 22033704 chr3L 22033766 22033801 12 97 4.5 3.0 3.8 2.5 133 chr3L 22033668 intergenic not near genes chr3L 22033734 intergenic not near genes chr3L 22033801 intergenic not near genes chr3L_12_22030001 chr3L_22030001 RAL-492 1778 chr3L 22046172 22046199 chr3L 22046295 22046318 12 121 4.0 5.0 4.5 2.2 146 chr3L 22046172 intron Oct-TyrR + chr3L 22046245 intron Oct-TyrR + chr3L 22046318 intron Oct-TyrR + chr3L_12_22045001 chr3L_22045001 RAL-492 1779 chr3L 22046203 22046213 chr3L 22046294 22046336 6 118 2.5 5.0 3.8 1.2 133 chr3L 22046203 intron Oct-TyrR + chr3L 22046270 intron Oct-TyrR + chr3L 22046336 intron Oct-TyrR + chr3L_6_22045001 chr3L_22045001 RAL-492 1780 chr3L 22099657 22099680 chr3L 22105863 22105886 3S18 6 6206 8.0 3.5 5.8 0.9 6229 chr3L 22099657 intergenic not near genes chr3L 22102772 intergenic not near genes chr3L 22105886 intergenic not near genes chr3L_6_22100001 chr3L_22100001 RAL-492 1781 chr3L 22124930 22124972 chr3L 22125106 22125148 18 175 3.5 4.5 4.0 3.6 218 chr3L 22124930 intergenic not near genes chr3L 22125039 intergenic not near genes chr3L 22125148 intergenic not near genes chr3L_18_22125001 chr3L_22125001 RAL-492 1782 chr3L 22130480 22130523 chr3L 22130646 22130689 4 156 0.5 1.5 1.0 2.0 209 chr3L 22130480 intergenic not near genes chr3L 22130584 intergenic not near genes chr3L 22130689 intergenic not near genes chr3L_4_22130001 chr3L_22130001 RAL-492 1783 chr3L 22361919 22361971 chr3L 22362016 22362067 8 97 5.5 3.5 4.5 1.5 148 chr3L 22361919 intron Ten-m - chr3L 22361993 intron Ten-m - chr3L 22362067 intron Ten-m - chr3L_8_22360001 chr3L_22360001 RAL-492 1784 chr3L 22395598 22395627 chr3L 22395677 22395727 6 78 2.0 2.5 2.2 1.9 129 chr3L 22395598 intron Ten-m - chr3L 22395662 intron Ten-m - chr3L 22395727 intron Ten-m - chr3L_6_22395001 chr3L_22395001 RAL-492 1785 chr3L 22522692 22522717 chr3L 22522788 22522814 8 97 5.0 5.5 5.2 1.3 122 chr3L 22522692 intergenic not near genes chr3L 22522753 intergenic not near genes chr3L 22522814 intergenic not near genes chr3L_8_22520001 chr3L_22520001 RAL-492 1786 chr3L 22555756 22555796 chr3L 22563246 22563270 blood 6 7486 2.5 3.5 3.0 1.5 7514 chr3L 22555756 intergenic not near genes chr3L 22559513 intergenic not near genes chr3L 22563270 intergenic not near genes chr3L_6_22555001 chr3L_22555001 RAL-492 1787 chr3L 22577630 22577641 chr3L 22582423 22582437 Doc 5 4802 4.0 6.5 5.2 0.8 4807 chr3L 22577630 intergenic not near genes chr3L 22580034 intergenic not near genes chr3L 22582437 3` UTR CG14459 - chr3L_5_22580001 chr3L_22580001 RAL-492 1788 chr3L 22587194 22587246 chr3L 22587311 22587363 19 115 3.0 3.5 3.2 4.5 169 chr3L 22587194 intron CG14459 - chr3L 22587278 intron CG14459 - chr3L 22587363 intron CG14459 - chr3L_19_22585001 chr3L_22585001 RAL-492 1789 chr3L 22617183 22617198 chr3L 22624655 22624669 blood 4 7472 7.5 6.5 7.0 0.5 7486 chr3L 22617183 intron CG14459 - chr3L 22620926 intron CG14459 - chr3L 22624669 intron CG14459 - chr3L_4_22620001 chr3L_22620001 RAL-492 1790 chr3L 22617204 22617223 chr3L 22624646 22624669 blood 6 7460 5.0 6.5 5.8 0.9 7465 chr3L 22617204 intron CG14459 - chr3L 22620936 intron CG14459 - chr3L 22624669 intron CG14459 - chr3L_6_22620001 chr3L_22620001 RAL-492 1791 chr3L 22659039 22659089 chr3L 22659137 22659186 13 94 5.0 8.5 6.8 1.7 147 chr3L 22659039 intergenic not near genes chr3L 22659112 intergenic not near genes chr3L 22659186 intergenic not near genes chr3L_13_22655001 chr3L_22655001 RAL-492 1792 chr3L 22663183 22663227 chr3L 22663295 22663339 11 109 2.0 3.5 2.8 2.9 156 chr3L 22663183 intergenic not near genes chr3L 22663261 intergenic not near genes chr3L 22663339 intergenic not near genes chr3L_11_22660001 chr3L_22660001 RAL-492 1793 chr3L 22749961 22750009 chr3L 22756631 22756666 7 6669 43.5 36.0 39.8 0.2 6705 chr3L 22749961 exon SPoCk + chr3L 22753314 intron SPoCk + chr3L 22756666 intron SPoCk + chr3L_7_22750001 chr3L_22750001 RAL-492 1794 chr3L 22761371 22761411 chr3L 22766822 22766861 Ivk 13 5452 2.5 5.5 4.0 2.6 5490 chr3L 22761371 intron SPoCk + chr3L 22764116 intron SPoCk + chr3L 22766861 intron SPoCk + chr3L_13_22760001 chr3L_22760001 RAL-492 1795 chr3L 22838565 22838616 chr3L 22838666 22838716 12 100 6.0 2.5 4.2 2.3 151 chr3L 22838565 intergenic CG11226 + chr3L 22838640 intergenic CG11226 + chr3L 22838716 intergenic not near genes chr3L_12_22835001 chr3L_22835001 RAL-492 1796 chr3L 22853443 22853716 chr3L 22853550 22853822 28 103 4.5 5.5 5.0 4.7 379 chr3L 22853443 5` UTR,5` UTR CR43426 +,CG32462 - chr3L 22853632 5` UTR CR43426 + chr3L 22853822 5` UTR CR43426 + chr3L_28_22850001 chr3L_22850001 RAL-492 1797 chr3L 22865974 22866005 chr3L 22867127 22867154 Doc 8 1152 5.5 6.0 5.8 1.2 1180 chr3L 22865974 intron CG33170 + chr3L 22866564 intron CG33170 + chr3L 22867154 intron CG33170 + chr3L_8_22865001 chr3L_22865001 RAL-492 1798 chr3L 22886568 22886591 chr3L 22886670 22886693 14 100 10.5 6.0 8.2 1.5 125 chr3L 22886568 intron slif + chr3L 22886630 intron slif + chr3L 22886693 intron slif + chr3L_14_22885001 chr3L_22885001 RAL-492 1799 chr3L 22886593 22886622 chr3L 22886669 22886692 12 92 4.5 5.5 5.0 2.0 99 chr3L 22886593 intron slif + chr3L 22886642 intron slif + chr3L 22886692 intron slif + chr3L_12_22885001 chr3L_22885001 RAL-492 1800 chr3L 22908067 22908067 chr3L 24821492 24821494 5 1913426 18.5 18.0 18.2 0.3 1913427 chr3L 22908067 intergenic not near genes chr3L 23864780 intron CG40470 - chr3L 24821494 intergenic not near genes chr3L_5_23860001 chr3L_23860001 RAL-492 1801 chr3L 22909006 22909048 chr3L 22909111 22909157 15 106 2.5 2.5 2.5 4.3 151 chr3L 22909006 intergenic CR45661 + chr3L 22909082 intergenic CR45661 + chr3L 22909157 intergenic CR45661 + chr3L_15_22905001 chr3L_22905001 RAL-492 1802 chr3L 22924954 22924973 chr3L 22925024 22925028 4 73 1.5 1.0 1.2 1.8 74 chr3L 22924954 intergenic not near genes chr3L 22924991 intergenic not near genes chr3L 22925028 intergenic not near genes chr3L_4_22920001 chr3L_22920001 RAL-492 1803 chr3L 22935724 22935726 chr3L 22935903 22935952 5 209 2.5 7.5 5.0 0.8 228 chr3L 22935724 intergenic not near genes chr3L 22935838 intergenic not near genes chr3L 22935952 intergenic not near genes chr3L_5_22935001 chr3L_22935001 RAL-492 1804 chr3L 22962432 22962476 chr3L 22963773 22963817 INE-1 17 1337 1.5 5.0 3.2 4.0 1385 chr3L 22962432 intergenic not near genes chr3L 22963124 intergenic not near genes chr3L 22963817 intergenic not near genes chr3L_17_22960001 chr3L_22960001 RAL-492 1805 chr3L 22985298 22985312 chr3L 22985401 22985413 4 102 6.0 6.0 6.0 0.6 115 chr3L 22985298 intergenic not near genes chr3L 22985356 intergenic not near genes chr3L 22985413 intergenic not near genes chr3L_4_22985001 chr3L_22985001 RAL-492 1806 chr3L 22989852 22989869 chr3L 22996845 22996863 297 9 6994 11.5 5.0 8.2 1.0 7011 chr3L 22989852 intergenic not near genes chr3L 22993358 intergenic not near genes chr3L 22996863 intergenic not near genes chr3L_9_22990001 chr3L_22990001 RAL-492 1807 chr3L 23096074 23096102 chr3L 23096157 23096180 5 88 4.5 2.5 3.5 1.1 106 chr3L 23096074 intergenic not near genes chr3L 23096127 intergenic not near genes chr3L 23096180 intergenic not near genes chr3L_5_23095001 chr3L_23095001 RAL-492 1808 chr3L 23183598 23183641 chr3L 23183708 23183724 13 105 1.5 0.5 1.0 6.5 126 chr3L 23183598 intron,3` UTR CG34031 +,CR43967 - chr3L 23183661 intron,3` UTR CG34031 +,CR43967 - chr3L 23183724 intron,3` UTR CG34031 +,CR43967 - chr3L_13_23180001 chr3L_23180001 RAL-492 1809 chr3L 23255296 23255340 chr3L 23255392 23255436 9 94 1.0 2.5 1.8 3.2 140 chr3L 23255296 intron nAChRalpha4 + chr3L 23255366 intron nAChRalpha4 + chr3L 23255436 intron nAChRalpha4 + chr3L_9_23255001 chr3L_23255001 RAL-492 1810 chr3L 23290471 23290475 chr3L 23295323 23295328 X-element 5 4852 20.5 11.5 16.0 0.3 4857 chr3L 23290471 intergenic not near genes chr3L 23292900 intergenic not near genes chr3L 23295328 intergenic not near genes chr3L_5_23290001 chr3L_23290001 RAL-492 1811 chr3L 23290478 23290508 chr3L 23295310 23295361 X-element 27 4851 12.5 9.5 11.0 2.2 4883 chr3L 23290478 intergenic not near genes chr3L 23292920 intergenic not near genes chr3L 23295361 intergenic not near genes chr3L_27_23290001 chr3L_23290001 RAL-492 1812 chr3L 23323466 23323493 chr3L 23324925 23324950 5 1453 7.0 2.5 4.8 0.9 1484 chr3L 23323466 intron alpha-Cat - chr3L 23324208 intron alpha-Cat - chr3L 23324950 intron alpha-Cat - chr3L_5_23320001 chr3L_23320001 RAL-492 1813 chr3L 23325229 23325282 chr3L 23325369 23325422 14 139 4.0 2.0 3.0 3.5 193 chr3L 23325229 intron alpha-Cat - chr3L 23325326 intron alpha-Cat - chr3L 23325422 intron alpha-Cat - chr3L_14_23325001 chr3L_23325001 RAL-492 1814 chr3L 23824007 23824037 chr3L 23824440 23824469 9 433 6.5 3.0 4.8 1.6 462 chr3L 23824007 intergenic not near genes chr3L 23824238 intergenic not near genes chr3L 23824469 intergenic not near genes chr3L_9_23820001 chr3L_23820001 RAL-492 1815 chr3L 23848822 23848833 chr3L 23849666 23849677 R1A1-element 4 841 9.0 5.5 7.2 0.5 855 chr3L 23848822 intron CG40470 - chr3L 23849250 intron CG40470 - chr3L 23849677 intron CG40470 - chr3L_4_23845001 chr3L_23845001 RAL-492 1816 chr3L 24012391 24012433 chr3L 24020752 24020782 roo 7 8358 2.0 4.5 3.2 1.7 8391 chr3L 24012391 intergenic not near genes chr3L 24016586 intergenic not near genes chr3L 24020782 intergenic not near genes chr3L_7_24015001 chr3L_24015001 RAL-492 1817 chr3L 24541725 24541759 chr3L 24541821 24541851 10 93 3.0 3.0 3.0 2.5 126 chr3L 24541725 intron mRpS5 + chr3L 24541788 intron mRpS5 + chr3L 24541851 intron mRpS5 + chr3L_10_24540001 chr3L_24540001 RAL-492 1818 chr3L 25008060 25008075 chr3L 25008132 25008171 5 86 3.0 4.0 3.5 1.1 111 chr3L 25008060 intergenic not near genes chr3L 25008116 intergenic not near genes chr3L 25008171 intergenic not near genes chr3L_5_25005001 chr3L_25005001 RAL-492 1819 chr3L 25190069 25190092 chr3L 25191238 25191261 1360 4 1170 22.5 27.5 25.0 0.2 1192 chr3L 25190069 intergenic not near genes chr3L 25190665 intergenic not near genes chr3L 25191261 intergenic not near genes chr3L_4_25190001 chr3L_25190001 RAL-492 1820 chr3L 25331645 25331653 chr3L 25331734 25331741 4 90 2.0 3.0 2.5 1.1 96 chr3L 25331645 intergenic not near genes chr3L 25331693 intergenic not near genes chr3L 25331741 intergenic not near genes chr3L_4_25330001 chr3L_25330001 RAL-492 1821 chr3L 25502197 25502230 chr3L 25502314 25502326 4 108 10.5 7.5 9.0 0.4 129 chr3L 25502197 intron CG41343 - chr3L 25502262 intron CG41343 - chr3L 25502326 intron CG41343 - chr3L_4_25500001 chr3L_25500001 RAL-492 1822 chr3L 26344998 26345017 chr3L 26345296 26345314 7 297 24.0 16.0 20.0 0.3 316 chr3L 26344998 intergenic not near genes chr3L 26345156 intergenic not near genes chr3L 26345314 intergenic not near genes chr3L_7_26345001 chr3L_26345001 RAL-492 1823 chr3L 26345018 26345043 chr3L 26345295 26345341 7 295 23.0 15.5 19.2 0.3 323 chr3L 26345018 intergenic not near genes chr3L 26345180 intergenic not near genes chr3L 26345341 intergenic not near genes chr3L_7_26345001 chr3L_26345001 RAL-492 1824 chr3L 27390440 27390707 chr3L 27390670 27390801 8 110 31.5 34.0 32.8 0.2 361 chr3L 27390440 intron Dbp80 + chr3L 27390620 intron Dbp80 + chr3L 27390801 intron Dbp80 + chr3L_8_27390001 chr3L_27390001 RAL-492 1825 chr3R 1424545 1424555 chr3R 1425072 1425076 Transib5 4 526 0.5 1.5 1.0 2.0 531 chr3R 1424545 intron CG40155 + chr3R 1424810 intron CG40155 + chr3R 1425076 intron CG40155 + chr3R_4_1420001 chr3R_1420001 RAL-492 1826 chr3R 1830789 1830829 chr3R 1830887 1830929 9 100 2.0 1.5 1.8 3.2 140 chr3R 1830789 intergenic not near genes chr3R 1830859 intergenic not near genes chr3R 1830929 intergenic not near genes chr3R_9_1830001 chr3R_1830001 RAL-492 1827 chr3R 2534133 2534164 chr3R 2541701 2541724 6 7572 16.0 17.0 16.5 0.3 7591 chr3R 2534133 intergenic not near genes chr3R 2537928 intergenic not near genes chr3R 2541724 intergenic not near genes chr3R_6_2535001 chr3R_2535001 RAL-492 1828 chr3R 2556889 2556926 chr3R 2557602 2557643 7 714 23.0 22.0 22.5 0.3 754 chr3R 2556889 intron CG41056 - chr3R 2557266 intron CG41056 - chr3R 2557643 intron CG41056 - chr3R_7_2555001 chr3R_2555001 RAL-492 1829 chr3R 4105056 4105069 chr3R 4110245 4110284 copia 5 5215 3.0 3.0 3.0 1.2 5228 chr3R 4105056 intergenic not near genes chr3R 4107670 intergenic not near genes chr3R 4110284 intergenic not near genes chr3R_5_4105001 chr3R_4105001 RAL-492 1830 chr3R 4132895 4132927 chr3R 4133069 4133094 7 173 1.0 3.0 2.0 2.3 199 chr3R 4132895 5` UTR Gfat1 + chr3R 4132994 intron Gfat1 + chr3R 4133094 intron Gfat1 + chr3R_7_4130001 chr3R_4130001 RAL-492 1831 chr3R 4206052 4206102 chr3R 4211646 4211696 mdg3 5 5594 3.5 3.5 3.5 1.1 5644 chr3R 4206052 intron CG14636 - chr3R 4208874 intron CG14636 - chr3R 4211696 intron CG14636 - chr3R_5_4205001 chr3R_4205001 RAL-492 1832 chr3R 4366742 4366773 chr3R 4375145 4375175 roo 8 8403 2.0 2.5 2.2 2.5 8433 chr3R 4366742 3` UTR CG1090 + chr3R 4370958 intergenic not near genes chr3R 4375175 5` UTR CR44922 + chr3R_8_4370001 chr3R_4370001 RAL-492 1833 chr3R 4408394 4408423 chr3R 4412718 4412747 Juan 8 4321 7.0 3.5 5.2 1.3 4353 chr3R 4408394 intron CG32944 - chr3R 4410570 intron CG32944 - chr3R 4412747 intron CG32944 - chr3R_8_4410001 chr3R_4410001 RAL-492 1834 chr3R 4474574 4474599 chr3R 4474859 4474884 4 285 1.0 1.0 1.0 2.0 310 chr3R 4474574 intron CG31523 - chr3R 4474729 intron CG31523 - chr3R 4474884 intron CG31523 - chr3R_4_4470001 chr3R_4470001 RAL-492 1835 chr3R 4609530 4609569 chr3R 4610714 4610726 1360 14 1180 7.5 10.5 9.0 1.4 1196 chr3R 4609530 intergenic not near genes chr3R 4610128 intergenic not near genes chr3R 4610726 intergenic not near genes chr3R_14_4610001 chr3R_4610001 RAL-492 1836 chr3R 4680686 4680741 chr3R 4680785 4680840 19 98 3.0 1.5 2.2 5.9 154 chr3R 4680686 intron CG43427 + chr3R 4680763 intron CG43427 + chr3R 4680840 intron CG43427 + chr3R_19_4680001 chr3R_4680001 RAL-492 1837 chr3R 4733656 4733702 chr3R 4733800 4733823 8 141 3.5 1.5 2.5 2.3 167 chr3R 4733656 intergenic not near genes chr3R 4733740 intergenic not near genes chr3R 4733823 intergenic not near genes chr3R_8_4730001 chr3R_4730001 RAL-492 1838 chr3R 4753225 4753242 chr3R 4757548 4757564 F-element 5 4321 7.0 10.0 8.5 0.5 4339 chr3R 4753225 intron,intron atms +,CG44098 - chr3R 4755394 intron,intron atms +,CG44098 - chr3R 4757564 intron,exon atms +,CG44098 - chr3R_5_4755001 chr3R_4755001 RAL-492 1839 chr3R 4769140 4769191 chr3R 4769238 4769289 22 94 3.0 4.0 3.5 4.9 149 chr3R 4769140 intron,intron atms +,CG44098 - chr3R 4769214 intron,intron atms +,CG44098 - chr3R 4769289 intron,intron atms +,CG44098 - chr3R_22_4765001 chr3R_4765001 RAL-492 1840 chr3R 4796101 4796144 chr3R 4796241 4796287 20 140 6.0 5.5 5.8 2.9 186 chr3R 4796101 intron ctrip - chr3R 4796194 intron ctrip - chr3R 4796287 intron ctrip - chr3R_20_4795001 chr3R_4795001 RAL-492 1841 chr3R 4887479 4887508 chr3R 4894856 4894900 rover 6 7377 3.5 4.5 4.0 1.2 7421 chr3R 4887479 intergenic not near genes chr3R 4891190 intergenic not near genes chr3R 4894900 intergenic not near genes chr3R_6_4890001 chr3R_4890001 RAL-492 1842 chr3R 4896288 4896321 chr3R 4896383 4896434 8 110 5.5 1.5 3.5 1.8 146 chr3R 4896288 intergenic CR45580 + chr3R 4896361 intergenic CR45580 + chr3R 4896434 5` UTR CR45580 + chr3R_8_4895001 chr3R_4895001 RAL-492 1843 chr3R 4942125 4942156 chr3R 4942241 4942271 11 114 4.0 4.5 4.2 2.1 146 chr3R 4942125 intron Cdep + chr3R 4942198 intron Cdep + chr3R 4942271 intron Cdep + chr3R_11_4940001 chr3R_4940001 RAL-492 1844 chr3R 4965998 4966037 chr3R 4966100 4966148 8 110 2.5 4.0 3.2 1.9 150 chr3R 4965998 intron CG1124 + chr3R 4966073 intron CG1124 + chr3R 4966148 intron CG1124 + chr3R_8_4965001 chr3R_4965001 RAL-492 1845 chr3R 4988085 4988122 chr3R 4990559 4990607 15 2477 33.5 20.5 27.0 0.5 2522 chr3R 4988085 intron CG2022 - chr3R 4989346 intron CG2022 - chr3R 4990607 intron CG2022 - chr3R_15_4985001 chr3R_4985001 RAL-492 1846 chr3R 5045823 5045876 chr3R 5052945 5052998 HMS-Beagle 9 7117 4.0 2.5 3.2 2.1 7175 chr3R 5045823 3` UTR CR43635 - chr3R 5049410 intergenic not near genes chr3R 5052998 intergenic CR45588 - chr3R_9_5045001 chr3R_5045001 RAL-492 1847 chr3R 5067964 5068014 chr3R 5073501 5073551 mdg3 27 5533 6.5 5.5 6.0 3.9 5587 chr3R 5067964 intergenic not near genes chr3R 5070758 intergenic not near genes chr3R 5073551 intergenic not near genes chr3R_27_5070001 chr3R_5070001 RAL-492 1848 chr3R 5250898 5250913 chr3R 5250995 5251043 8 125 6.5 5.0 5.8 1.2 145 chr3R 5250898 intron CG12163 - chr3R 5250970 intron CG12163 - chr3R 5251043 intron CG12163 - chr3R_8_5250001 chr3R_5250001 RAL-492 1849 chr3R 5278069 5278121 chr3R 5278170 5278222 13 97 3.0 4.5 3.8 2.7 153 chr3R 5278069 intron mtd - chr3R 5278146 intron mtd - chr3R 5278222 intron mtd - chr3R_13_5275001 chr3R_5275001 RAL-492 1850 chr3R 5338396 5338427 chr3R 5343575 5343606 Rt1c 14 5189 5.0 7.0 6.0 2.0 5210 chr3R 5338396 intron mtd - chr3R 5341001 intron mtd - chr3R 5343606 intron mtd - chr3R_14_5340001 chr3R_5340001 RAL-492 1851 chr3R 5445940 5445989 chr3R 5452420 5452427 Burdock 8 6475 5.5 4.5 5.0 1.3 6487 chr3R 5445940 intron CG14669 + chr3R 5449184 intron CG14669 + chr3R 5452427 intron CG14669 + chr3R_8_5445001 chr3R_5445001 RAL-492 1852 chr3R 5627127 5627174 chr3R 5627558 5627604 11 429 4.5 4.5 4.5 2.0 477 chr3R 5627127 intergenic not near genes chr3R 5627366 intergenic CG31551 + chr3R 5627604 intergenic CG31551 + chr3R_11_5625001 chr3R_5625001 RAL-492 1853 chr3R 5705432 5705480 chr3R 5705568 5705594 12 129 4.0 3.0 3.5 2.7 162 chr3R 5705432 intron plx + chr3R 5705513 intron plx + chr3R 5705594 intron plx + chr3R_12_5705001 chr3R_5705001 RAL-492 1854 chr3R 5715512 5715541 chr3R 5715602 5715646 11 103 0.0 1.0 0.5 7.3 134 chr3R 5715512 intron cas - chr3R 5715579 intron cas - chr3R 5715646 intron cas - chr3R_11_5715001 chr3R_5715001 RAL-492 1855 chr3R 5726074 5726120 chr3R 5726254 5726302 11 179 0.5 1.5 1.0 5.5 228 chr3R 5726074 intergenic not near genes chr3R 5726188 intergenic not near genes chr3R 5726302 intergenic not near genes chr3R_11_5725001 chr3R_5725001 RAL-492 1856 chr3R 5745994 5746045 chr3R 5746255 5746306 pogo 16 260 2.5 3.5 3.0 4.0 312 chr3R 5745994 3` UTR Madm + chr3R 5746150 3` UTR Madm + chr3R 5746306 3` UTR Madm + chr3R_16_5745001 chr3R_5745001 RAL-492 1857 chr3R 5747033 5747042 chr3R 5753223 5753252 diver 4 6205 1.0 1.0 1.0 2.0 6219 chr3R 5747033 intergenic Madm + chr3R 5750142 intergenic not near genes chr3R 5753252 intergenic CG2091 - chr3R_4_5750001 chr3R_5750001 RAL-492 1858 chr3R 5772357 5772405 chr3R 5772535 5772583 12 178 2.5 3.0 2.8 3.2 226 chr3R 5772357 intron CG2082 - chr3R 5772470 intron CG2082 - chr3R 5772583 intron CG2082 - chr3R_12_5770001 chr3R_5770001 RAL-492 1859 chr3R 5809092 5809136 chr3R 5809353 5809397 pogo 13 258 3.0 2.5 2.8 3.4 305 chr3R 5809092 3` UTR CG11000 + chr3R 5809244 3` UTR CG11000 + chr3R 5809397 3` UTR CG11000 + chr3R_13_5805001 chr3R_5805001 RAL-492 1860 chr3R 5822362 5822403 chr3R 5823548 5823590 1360 10 1187 4.5 4.0 4.2 1.9 1228 chr3R 5822362 3` UTR CG2023 - chr3R 5822976 3` UTR CG2023 - chr3R 5823590 3` UTR CG2023 - chr3R_10_5820001 chr3R_5820001 RAL-492 1861 chr3R 5927544 5927579 chr3R 5927804 5927839 pogo 11 260 3.5 6.0 4.8 1.9 295 chr3R 5927544 intron CG34113 - chr3R 5927692 intron CG34113 - chr3R 5927839 intron CG34113 - chr3R_11_5925001 chr3R_5925001 RAL-492 1862 chr3R 6015965 6015984 chr3R 6024459 6024485 Tirant 6 8499 3.5 4.0 3.8 1.2 8520 chr3R 6015965 intergenic not near genes chr3R 6020225 intergenic not near genes chr3R 6024485 intergenic not near genes chr3R_6_6020001 chr3R_6020001 RAL-492 1863 chr3R 6066726 6066774 chr3R 6066823 6066869 16 96 2.5 3.5 3.0 4.0 143 chr3R 6066726 intergenic not near genes chr3R 6066798 intergenic not near genes chr3R 6066869 intergenic not near genes chr3R_16_6065001 chr3R_6065001 RAL-492 1864 chr3R 6121003 6121055 chr3R 6121098 6121138 17 94 1.0 1.0 1.0 8.5 135 chr3R 6121003 intergenic not near genes chr3R 6121070 intergenic not near genes chr3R 6121138 intergenic not near genes chr3R_17_6120001 chr3R_6120001 RAL-492 1865 chr3R 6158490 6158542 chr3R 6167093 6167135 Tirant 10 8601 5.5 2.5 4.0 2.0 8645 chr3R 6158490 intergenic not near genes chr3R 6162812 intergenic not near genes chr3R 6167135 intergenic CG1077 + chr3R_10_6160001 chr3R_6160001 RAL-492 1866 chr3R 6175157 6175205 chr3R 6182449 6182463 HMS-Beagle2 14 7289 3.0 2.0 2.5 4.0 7306 chr3R 6175157 intergenic Osi1 + chr3R 6178810 intron CR45194 + chr3R 6182463 intergenic CR45194 + chr3R_14_6175001 chr3R_6175001 RAL-492 1867 chr3R 6189725 6189749 chr3R 6189806 6189845 9 94 3.5 2.5 3.0 2.2 120 chr3R 6189725 intron NPFR + chr3R 6189785 intron NPFR + chr3R 6189845 intron NPFR + chr3R_9_6185001 chr3R_6185001 RAL-492 1868 chr3R 6191148 6191199 chr3R 6191248 6191298 16 96 4.0 4.0 4.0 3.2 150 chr3R 6191148 intron NPFR + chr3R 6191223 intron NPFR + chr3R 6191298 intron NPFR + chr3R_16_6190001 chr3R_6190001 RAL-492 1869 chr3R 6206276 6206291 chr3R 6206513 6206528 BS 6 236 8.5 6.0 7.2 0.7 252 chr3R 6206276 exon Osi24 + chr3R 6206402 intron Osi24 + chr3R 6206528 intron Osi24 + chr3R_6_6205001 chr3R_6205001 RAL-492 1870 chr3R 6206292 6206317 chr3R 6206512 6206535 BS 8 225 5.0 6.0 5.5 1.2 243 chr3R 6206292 exon Osi24 + chr3R 6206414 intron Osi24 + chr3R 6206535 intron Osi24 + chr3R_8_6205001 chr3R_6205001 RAL-492 1871 chr3R 6434524 6434570 chr3R 6434664 6434711 13 140 3.0 4.0 3.5 2.9 187 chr3R 6434524 intron gpp + chr3R 6434618 intron gpp + chr3R 6434711 intron gpp + chr3R_13_6430001 chr3R_6430001 RAL-492 1872 chr3R 6461560 6461613 chr3R 6461660 6461713 13 100 4.0 1.5 2.8 3.4 153 chr3R 6461560 intergenic not near genes chr3R 6461636 intergenic not near genes chr3R 6461713 intergenic not near genes chr3R_13_6460001 chr3R_6460001 RAL-492 1873 chr3R 6494820 6494871 chr3R 6495033 6495083 11 213 3.0 2.0 2.5 3.1 263 chr3R 6494820 3` UTR CG15186 + chr3R 6494952 3` UTR CG15186 + chr3R 6495083 intergenic CG15186 + chr3R_11_6490001 chr3R_6490001 RAL-492 1874 chr3R 6510012 6510047 chr3R 6515110 6515148 jockey 7 5100 3.5 1.0 2.2 2.2 5136 chr3R 6510012 intergenic not near genes chr3R 6512580 intergenic not near genes chr3R 6515148 intergenic not near genes chr3R_7_6510001 chr3R_6510001 RAL-492 1875 chr3R 6737501 6737529 chr3R 6739286 6739322 Doc 7 1798 3.5 3.5 3.5 1.6 1821 chr3R 6737501 intron pb - chr3R 6738412 intron pb - chr3R 6739322 intron pb - chr3R_7_6735001 chr3R_6735001 RAL-492 1876 chr3R 6804209 6804230 chr3R 6804314 6804339 7 122 1.5 5.0 3.2 1.7 130 chr3R 6804209 intergenic not near genes chr3R 6804274 intergenic not near genes chr3R 6804339 intergenic not near genes chr3R_7_6800001 chr3R_6800001 RAL-492 1877 chr3R 6918049 6918095 chr3R 6918147 6918193 7 98 1.5 3.0 2.2 2.2 144 chr3R 6918049 intron Antp - chr3R 6918121 intron Antp - chr3R 6918193 intron Antp - chr3R_7_6915001 chr3R_6915001 RAL-492 1878 chr3R 7017587 7017623 chr3R 7017681 7017732 5 104 2.0 2.5 2.2 1.6 145 chr3R 7017587 intergenic not near genes chr3R 7017660 intergenic not near genes chr3R 7017732 intergenic not near genes chr3R_5_7015001 chr3R_7015001 RAL-492 1879 chr3R 7065718 7065743 chr3R 7065816 7065841 8 98 3.5 3.0 3.2 1.9 123 chr3R 7065718 exon CG1105 - chr3R 7065780 intron CG1105 - chr3R 7065841 intron CG1105 - chr3R_8_7065001 chr3R_7065001 RAL-492 1880 chr3R 7092764 7092811 chr3R 7093348 7093351 19 578 4.0 4.0 4.0 3.8 587 chr3R 7092764 3` UTR CR43685 - chr3R 7093058 intron CR43685 - chr3R 7093351 3` UTR CR43685 - chr3R_19_7090001 chr3R_7090001 RAL-492 1881 chr3R 7103285 7103295 chr3R 7103379 7103391 4 95 4.5 7.0 5.8 0.6 106 chr3R 7103285 intron Alh - chr3R 7103338 intron Alh - chr3R 7103391 intron Alh - chr3R_4_7100001 chr3R_7100001 RAL-492 1882 chr3R 7103296 7103318 chr3R 7103370 7103375 8 86 4.5 6.5 5.5 1.2 79 chr3R 7103296 intron Alh - chr3R 7103336 intron Alh - chr3R 7103375 intron Alh - chr3R_8_7100001 chr3R_7100001 RAL-492 1883 chr3R 7126489 7126524 chr3R 7126604 7126639 6 115 1.0 4.5 2.8 1.6 150 chr3R 7126489 3` UTR,3` UTR CG10098 +,CG10068 - chr3R 7126564 3` UTR CG10068 - chr3R 7126639 3` UTR CG10068 - chr3R_6_7125001 chr3R_7125001 RAL-492 1884 chr3R 7173662 7173700 chr3R 7173762 7173800 4 94 4.5 2.0 3.2 1.0 138 chr3R 7173662 intron sas + chr3R 7173731 intron sas + chr3R 7173800 intron sas + chr3R_4_7170001 chr3R_7170001 RAL-492 1885 chr3R 7217450 7217488 chr3R 7217690 7217729 11 241 2.0 8.0 5.0 1.8 279 chr3R 7217450 intergenic CG14605 -,CG14606 - chr3R 7217590 intergenic CG14605 - chr3R 7217729 exon CG14605 - chr3R_11_7215001 chr3R_7215001 RAL-492 1886 chr3R 7319778 7319788 chr3R 7319879 7319886 4 100 4.0 5.5 4.8 0.7 108 chr3R 7319778 intergenic not near genes chr3R 7319832 intergenic not near genes chr3R 7319886 intergenic not near genes chr3R_4_7315001 chr3R_7315001 RAL-492 1887 chr3R 7322207 7322227 chr3R 7322308 7322328 6 100 2.5 2.0 2.2 1.9 121 chr3R 7322207 intergenic not near genes chr3R 7322268 intergenic not near genes chr3R 7322328 intergenic not near genes chr3R_6_7320001 chr3R_7320001 RAL-492 1888 chr3R 7322228 7322241 chr3R 7322306 7322342 5 96 1.5 2.0 1.8 1.8 114 chr3R 7322228 intergenic not near genes chr3R 7322285 intergenic not near genes chr3R 7322342 intergenic not near genes chr3R_5_7320001 chr3R_7320001 RAL-492 1889 chr3R 7386980 7387012 chr3R 7387102 7387134 17 120 2.0 2.5 2.2 5.3 154 chr3R 7386980 intergenic CR45560 + chr3R 7387057 intergenic CR45560 + chr3R 7387134 intergenic CR45560 + chr3R_17_7385001 chr3R_7385001 RAL-492 1890 chr3R 7393307 7393355 chr3R 7393419 7393467 10 109 4.0 6.0 5.0 1.7 160 chr3R 7393307 intergenic not near genes chr3R 7393387 intergenic not near genes chr3R 7393467 intergenic not near genes chr3R_10_7390001 chr3R_7390001 RAL-492 1891 chr3R 7410573 7410617 chr3R 7410679 7410718 5 103 2.5 7.5 5.0 0.8 145 chr3R 7410573 intergenic not near genes chr3R 7410646 intergenic not near genes chr3R 7410718 intergenic not near genes chr3R_5_7410001 chr3R_7410001 RAL-492 1892 chr3R 7438910 7438938 chr3R 7439005 7439015 5 91 5.5 8.5 7.0 0.6 105 chr3R 7438910 intergenic not near genes chr3R 7438962 intergenic not near genes chr3R 7439015 intergenic not near genes chr3R_5_7435001 chr3R_7435001 RAL-492 1893 chr3R 7447971 7448005 chr3R 7448069 7448103 13 98 8.0 5.5 6.8 1.7 132 chr3R 7447971 intergenic not near genes chr3R 7448037 intergenic not near genes chr3R 7448103 intergenic not near genes chr3R_13_7445001 chr3R_7445001 RAL-492 1894 chr3R 7481817 7481854 chr3R 7481908 7481919 4 73 3.5 3.5 3.5 0.9 102 chr3R 7481817 intergenic not near genes chr3R 7481868 intergenic not near genes chr3R 7481919 intergenic not near genes chr3R_4_7480001 chr3R_7480001 RAL-492 1895 chr3R 7503745 7503795 chr3R 7503879 7503930 12 134 3.5 3.0 3.2 2.9 185 chr3R 7503745 intron alpha-Est9 - chr3R 7503838 intron alpha-Est9 - chr3R 7503930 intron alpha-Est9 - chr3R_12_7500001 chr3R_7500001 RAL-492 1896 chr3R 7552945 7552997 chr3R 7553052 7553105 20 106 3.0 3.5 3.2 4.8 160 chr3R 7552945 intergenic not near genes chr3R 7553025 intergenic not near genes chr3R 7553105 intergenic not near genes chr3R_20_7550001 chr3R_7550001 RAL-492 1897 chr3R 7621530 7621555 chr3R 7621638 7621649 5 106 3.0 4.5 3.8 1.0 119 chr3R 7621530 intron CG34127 - chr3R 7621590 intron CG34127 - chr3R 7621649 intron CG34127 - chr3R_5_7620001 chr3R_7620001 RAL-492 1898 chr3R 7622681 7622710 chr3R 7622785 7622836 8 111 1.5 5.0 3.2 1.9 155 chr3R 7622681 intron CG34127 - chr3R 7622758 intron CG34127 - chr3R 7622836 intron CG34127 - chr3R_8_7620001 chr3R_7620001 RAL-492 1899 chr3R 7654983 7655036 chr3R 7655085 7655134 15 98 4.5 6.0 5.2 2.4 151 chr3R 7654983 intergenic not near genes chr3R 7655058 intergenic not near genes chr3R 7655134 intergenic not near genes chr3R_15_7655001 chr3R_7655001 RAL-492 1900 chr3R 7694562 7694599 chr3R 7713643 7713644 invader3 9 19076 1.0 3.5 2.2 2.8 19082 chr3R 7694562 3` UTR Nlg1 + chr3R 7704103 intergenic not near genes chr3R 7713644 intergenic not near genes chr3R_9_7700001 chr3R_7700001 RAL-492 1901 chr3R 7729459 7729468 chr3R 7737415 7737426 Stalker2 4 7957 8.0 7.5 7.8 0.5 7967 chr3R 7729459 intergenic not near genes chr3R 7733442 intergenic not near genes chr3R 7737426 intergenic not near genes chr3R_4_7730001 chr3R_7730001 RAL-492 1902 chr3R 7729474 7729499 chr3R 7737404 7737409 Stalker2 13 7950 3.5 6.5 5.0 2.2 7935 chr3R 7729474 intergenic not near genes chr3R 7733442 intergenic not near genes chr3R 7737409 intergenic not near genes chr3R_13_7730001 chr3R_7730001 RAL-492 1903 chr3R 7849624 7849667 chr3R 7850811 7850854 1360 7 1186 3.5 4.5 4.0 1.4 1230 chr3R 7849624 intron CG34384 + chr3R 7850239 intron CG34384 + chr3R 7850854 intron CG34384 + chr3R_7_7850001 chr3R_7850001 RAL-492 1904 chr3R 7973305 7973338 chr3R 7974386 7974420 1360 7 1082 1.5 3.5 2.5 2.0 1115 chr3R 7973305 intergenic not near genes chr3R 7973862 intergenic not near genes chr3R 7974420 3` UTR CD98hc - chr3R_7_7970001 chr3R_7970001 RAL-492 1905 chr3R 8049378 8049396 chr3R 8049584 8049592 6 205 1.5 13.0 7.2 0.7 214 chr3R 8049378 intron,exon CG43060 +,CG43618 + chr3R 8049485 intron CG43060 + chr3R 8049592 intron CG43060 + chr3R_6_8045001 chr3R_8045001 RAL-492 1906 chr3R 8090548 8090567 chr3R 8094046 8094061 297 5 3494 5.0 14.5 9.8 0.5 3513 chr3R 8090548 intergenic CR44330 + chr3R 8092304 intergenic not near genes chr3R 8094061 intergenic CG7900 + chr3R_5_8090001 chr3R_8090001 RAL-492 1907 chr3R 8094407 8094434 chr3R 8099717 8099759 Transpac 7 5323 5.5 4.5 5.0 1.2 5352 chr3R 8094407 intron CG7900 + chr3R 8097083 intron CG7900 + chr3R 8099759 intron CG7900 + chr3R_7_8095001 chr3R_8095001 RAL-492 1908 chr3R 8101765 8101790 chr3R 8104846 8104893 G2 5 3096 2.5 2.0 2.2 1.6 3128 chr3R 8101765 exon CG7900 + chr3R 8103329 intron CG7900 + chr3R 8104893 3` UTR CG7900 + chr3R_5_8100001 chr3R_8100001 RAL-492 1909 chr3R 8107371 8107419 chr3R 8107520 8107556 15 150 2.5 1.0 1.8 5.4 185 chr3R 8107371 intron puc + chr3R 8107464 intron puc + chr3R 8107556 intron puc + chr3R_15_8105001 chr3R_8105001 RAL-492 1910 chr3R 8207567 8207588 chr3R 8208404 8208424 F-element 9 858 3.0 6.5 4.8 1.6 857 chr3R 8207567 intergenic not near genes chr3R 8207996 intergenic not near genes chr3R 8208424 intergenic not near genes chr3R_9_8205001 chr3R_8205001 RAL-492 1911 chr3R 8255490 8255525 chr3R 8255599 8255619 6 105 8.5 3.5 6.0 0.9 129 chr3R 8255490 intron mtg + chr3R 8255554 intron mtg + chr3R 8255619 intron mtg + chr3R_6_8255001 chr3R_8255001 RAL-492 1912 chr3R 8273714 8273765 chr3R 8273821 8273872 15 107 4.5 2.5 3.5 3.3 158 chr3R 8273714 intergenic not near genes chr3R 8273793 intergenic not near genes chr3R 8273872 intergenic not near genes chr3R_15_8270001 chr3R_8270001 RAL-492 1913 chr3R 8339246 8339247 chr3R 21907534 21907536 14 13568289 20.0 20.5 20.2 0.7 13568290 chr3R 8339246 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_14_15120001 chr3R_15120001 RAL-492 1914 chr3R 8402987 8403040 chr3R 8412172 8412207 roo 17 9176 5.0 8.0 6.5 2.3 9220 chr3R 8402987 intron CG45263 - chr3R 8407597 intron CG45263 - chr3R 8412207 intron CG45263 - chr3R_17_8405001 chr3R_8405001 RAL-492 1915 chr3R 8426198 8426223 chr3R 8426275 8426301 13 75 6.5 6.0 6.2 1.8 103 chr3R 8426198 intron CG45263 - chr3R 8426250 intron CG45263 - chr3R 8426301 intron CG45263 - chr3R_13_8425001 chr3R_8425001 RAL-492 1916 chr3R 8559887 8559911 chr3R 8559993 8560016 12 116 4.5 4.5 4.5 2.2 129 chr3R 8559887 3` UTR pch2 - chr3R 8559952 3` UTR pch2 - chr3R 8560016 3` UTR pch2 - chr3R_12_8555001 chr3R_8555001 RAL-492 1917 chr3R 8570473 8570509 chr3R 8575123 8575165 HMS-Beagle 10 4646 7.0 9.5 8.2 1.1 4692 chr3R 8570473 intergenic not near genes chr3R 8572819 intergenic not near genes chr3R 8575165 intergenic not near genes chr3R_10_8570001 chr3R_8570001 RAL-492 1918 chr3R 8601764 8601798 chr3R 8610926 8610945 roo 9 9166 4.5 5.5 5.0 1.5 9181 chr3R 8601764 intron 5-HT2B + chr3R 8606354 intron 5-HT2B + chr3R 8610945 intron 5-HT2B + chr3R_9_8605001 chr3R_8605001 RAL-492 1919 chr3R 8685282 8685313 chr3R 8685402 8685433 8 120 5.0 3.0 4.0 1.6 151 chr3R 8685282 intron CR44937 - chr3R 8685358 intron CR44937 - chr3R 8685433 intron CR44937 - chr3R_8_8685001 chr3R_8685001 RAL-492 1920 chr3R 8707344 8707381 chr3R 8709803 8709842 jockey 9 2460 4.5 3.5 4.0 1.8 2498 chr3R 8707344 intergenic not near genes chr3R 8708593 intergenic not near genes chr3R 8709842 intergenic not near genes chr3R_9_8705001 chr3R_8705001 RAL-492 1921 chr3R 8798657 8798682 chr3R 8798746 8798784 5 99 4.0 4.5 4.2 1.0 127 chr3R 8798657 intron,intron Pif1A -,Pif1B - chr3R 8798720 intron,intron Pif1A -,Pif1B - chr3R 8798784 intron,intron Pif1A -,Pif1B - chr3R_5_8795001 chr3R_8795001 RAL-492 1922 chr3R 8837674 8837699 chr3R 8837776 8837802 4 102 6.5 0.5 3.5 0.9 128 chr3R 8837674 intron pyd - chr3R 8837738 intron pyd - chr3R 8837802 intron pyd - chr3R_4_8835001 chr3R_8835001 RAL-492 1923 chr3R 8898201 8898210 chr3R 8913801 8913809 297 4 15600 11.5 3.0 7.2 0.5 15608 chr3R 8898201 intron pyd - chr3R 8906005 intron pyd - chr3R 8913809 intron pyd - chr3R_4_8905001 chr3R_8905001 RAL-492 1924 chr3R 8917239 8917279 chr3R 8917393 8917434 8 148 3.0 5.0 4.0 1.6 195 chr3R 8917239 intron pyd - chr3R 8917336 intron pyd - chr3R 8917434 intron pyd - chr3R_8_8915001 chr3R_8915001 RAL-492 1925 chr3R 9079562 9079575 chr3R 9079680 9079690 5 117 8.5 4.5 6.5 0.7 128 chr3R 9079562 intron pum - chr3R 9079626 intron pum - chr3R 9079690 intron pum - chr3R_5_9075001 chr3R_9075001 RAL-492 1926 chr3R 9108846 9108882 chr3R 9108941 9108978 13 96 3.0 1.5 2.2 4.1 132 chr3R 9108846 intron pum - chr3R 9108912 intron pum - chr3R 9108978 intron pum - chr3R_13_9105001 chr3R_9105001 RAL-492 1927 chr3R 9118852 9118879 chr3R 9119228 9119256 5 375 3.0 2.5 2.8 1.3 404 chr3R 9118852 intron pum - chr3R 9119054 intron pum - chr3R 9119256 intron pum - chr3R_5_9115001 chr3R_9115001 RAL-492 1928 chr3R 9191715 9191724 chr3R 9191919 9191933 5 205 8.5 2.0 5.2 0.8 218 chr3R 9191715 intron pum - chr3R 9191824 intron pum - chr3R 9191933 intron pum - chr3R_5_9190001 chr3R_9190001 RAL-492 1929 chr3R 9191725 9191751 chr3R 9191918 9191929 5 187 6.0 1.5 3.8 1.0 204 chr3R 9191725 intron pum - chr3R 9191827 intron pum - chr3R 9191929 intron pum - chr3R_5_9190001 chr3R_9190001 RAL-492 1930 chr3R 9242517 9242555 chr3R 9242647 9242685 7 130 2.0 2.5 2.2 2.2 168 chr3R 9242517 intron ird1 - chr3R 9242601 intron ird1 - chr3R 9242685 intron ird1 - chr3R_7_9240001 chr3R_9240001 RAL-492 1931 chr3R 9251413 9251459 chr3R 9251513 9251555 4 98 6.0 3.0 4.5 0.7 142 chr3R 9251413 3` UTR CG8420 + chr3R 9251484 intergenic CG8420 +,St2 + chr3R 9251555 intergenic CG8420 +,St2 + chr3R_4_9250001 chr3R_9250001 RAL-492 1932 chr3R 9289167 9289183 chr3R 9289422 9289468 7 279 3.5 2.0 2.8 1.8 301 chr3R 9289167 intergenic not near genes chr3R 9289318 intergenic not near genes chr3R 9289468 intergenic not near genes chr3R_7_9285001 chr3R_9285001 RAL-492 1933 chr3R 9319561 9319605 chr3R 9320015 9320057 jockey 11 452 3.5 3.5 3.5 2.4 496 chr3R 9319561 intron CG8861 - chr3R 9319809 intron CG8861 - chr3R 9320057 intron CG8861 - chr3R_11_9315001 chr3R_9315001 RAL-492 1934 chr3R 9361804 9361841 chr3R 9362065 9362102 pogo 8 260 0.5 4.5 2.5 2.3 298 chr3R 9361804 3` UTR CG45050 + chr3R 9361953 3` UTR CG45050 + chr3R 9362102 3` UTR CG45050 + chr3R_8_9360001 chr3R_9360001 RAL-492 1935 chr3R 9379124 9379175 chr3R 9379225 9379276 4 101 0.0 1.0 0.5 2.7 152 chr3R 9379124 intron FER - chr3R 9379200 intron FER - chr3R 9379276 intron FER - chr3R_4_9375001 chr3R_9375001 RAL-492 1936 chr3R 9699961 9700002 chr3R 9700067 9700097 1360 17 107 5.0 7.0 6.0 2.4 136 chr3R 9699961 intron Unc-115a - chr3R 9700029 intron Unc-115a - chr3R 9700097 intron Unc-115a - chr3R_17_9700001 chr3R_9700001 RAL-492 1937 chr3R 9740532 9740547 chr3R 9740638 9740653 6 106 5.0 2.0 3.5 1.3 121 chr3R 9740532 intergenic Pnn + chr3R 9740592 intergenic Pnn + chr3R 9740653 intergenic Pnn + chr3R_6_9740001 chr3R_9740001 RAL-492 1938 chr3R 9880171 9880195 chr3R 9883242 9883288 13 3074 31.5 32.5 32.0 0.4 3117 chr3R 9880171 intron Glut4EF + chr3R 9881730 intron Glut4EF + chr3R 9883288 intron Glut4EF + chr3R_13_9880001 chr3R_9880001 RAL-492 1939 chr3R 9888826 9888870 chr3R 9889104 9889148 17 275 2.5 5.5 4.0 3.4 322 chr3R 9888826 intron Glut4EF + chr3R 9888987 intron Glut4EF + chr3R 9889148 intron Glut4EF + chr3R_17_9885001 chr3R_9885001 RAL-492 1940 chr3R 9891448 9891484 chr3R 9891605 9891638 5 156 2.0 1.0 1.5 2.0 190 chr3R 9891448 intron Glut4EF + chr3R 9891543 intron Glut4EF + chr3R 9891638 intron Glut4EF + chr3R_5_9890001 chr3R_9890001 RAL-492 1941 chr3R 9997403 9997455 chr3R 9997508 9997549 16 90 7.5 3.0 5.2 2.6 146 chr3R 9997403 5` UTR Spn85F + chr3R 9997476 5` UTR Spn85F + chr3R 9997549 exon Spn85F + chr3R_16_9995001 chr3R_9995001 RAL-492 1942 chr3R 10183089 10183107 chr3R 10183186 10183204 5 97 2.5 2.5 2.5 1.4 115 chr3R 10183089 intron CG12814 - chr3R 10183146 intron CG12814 - chr3R 10183204 intron CG12814 - chr3R_5_10180001 chr3R_10180001 RAL-492 1943 chr3R 10231763 10231812 chr3R 10237359 10237404 mdg3 13 5595 2.0 3.5 2.8 3.4 5641 chr3R 10231763 intron CG42795 + chr3R 10234584 intron CG42795 + chr3R 10237404 intron CG42795 + chr3R_13_10230001 chr3R_10230001 RAL-492 1944 chr3R 10255370 10255387 chr3R 10260824 10260842 I-element 5 5458 4.0 4.5 4.2 1.0 5472 chr3R 10255370 3` UTR Sirt6 - chr3R 10258106 intron Sirt6 - chr3R 10260842 exon Sirt6 - chr3R_5_10255001 chr3R_10255001 RAL-492 1945 chr3R 10306954 10307003 chr3R 10312195 10312243 12 5240 34.5 19.5 27.0 0.4 5289 chr3R 10306954 exon CG43143 + chr3R 10309598 exon CG6293 - chr3R 10312243 3` UTR Bruce - chr3R_12_10305001 chr3R_10305001 RAL-492 1946 chr3R 10403040 10403054 chr3R 10403141 10403155 5 101 3.0 3.0 3.0 1.2 115 chr3R 10403040 3` UTR CG6325 - chr3R 10403098 3` UTR CG6325 - chr3R 10403155 3` UTR CG6325 - chr3R_5_10400001 chr3R_10400001 RAL-492 1947 chr3R 10417457 10417502 chr3R 10417812 10417857 8 354 5.0 2.5 3.8 1.7 400 chr3R 10417457 intergenic not near genes chr3R 10417657 intergenic not near genes chr3R 10417857 intergenic not near genes chr3R_8_10415001 chr3R_10415001 RAL-492 1948 chr3R 10553817 10553836 chr3R 10553926 10553941 6 107 9.0 5.5 7.2 0.7 124 chr3R 10553817 intron hth - chr3R 10553879 intron hth - chr3R 10553941 intron hth - chr3R_6_10550001 chr3R_10550001 RAL-492 1949 chr3R 10553837 10553865 chr3R 10553924 10553939 11 82 5.0 5.0 5.0 1.8 102 chr3R 10553837 intron hth - chr3R 10553888 intron hth - chr3R 10553939 intron hth - chr3R_11_10550001 chr3R_10550001 RAL-492 1950 chr3R 10606178 10606226 chr3R 10606273 10606322 9 91 4.5 4.5 4.5 1.6 144 chr3R 10606178 intron hth - chr3R 10606250 intron hth - chr3R 10606322 intron hth - chr3R_9_10605001 chr3R_10605001 RAL-492 1951 chr3R 10727624 10727679 chr3R 10727723 10727732 17 88 3.0 5.5 4.2 3.3 108 chr3R 10727624 intergenic not near genes chr3R 10727678 intergenic not near genes chr3R 10727732 intergenic not near genes chr3R_17_10725001 chr3R_10725001 RAL-492 1952 chr3R 10804184 10804200 chr3R 10811735 10811752 17.6 5 7552 3.5 5.5 4.5 0.9 7568 chr3R 10804184 intergenic CG14692 - chr3R 10807968 intergenic not near genes chr3R 10811752 3` UTR CG14693 - chr3R_5_10805001 chr3R_10805001 RAL-492 1953 chr3R 10927362 10927378 chr3R 10927598 10927625 7 252 1.5 2.5 2.0 2.3 263 chr3R 10927362 intergenic not near genes chr3R 10927494 intergenic not near genes chr3R 10927625 intergenic not near genes chr3R_7_10925001 chr3R_10925001 RAL-492 1954 chr3R 10968169 10968223 chr3R 10968275 10968292 10 96 5.5 3.0 4.2 1.9 123 chr3R 10968169 intergenic not near genes chr3R 10968230 intergenic not near genes chr3R 10968292 intergenic not near genes chr3R_10_10965001 chr3R_10965001 RAL-492 1955 chr3R 11035321 11035369 chr3R 11035445 11035494 9 120 1.0 6.0 3.5 2.0 173 chr3R 11035321 intron CG34114 + chr3R 11035408 intron CG34114 + chr3R 11035494 intron CG34114 + chr3R_9_11035001 chr3R_11035001 RAL-492 1956 chr3R 11085460 11085482 chr3R 11085554 11085570 9 94 2.5 6.5 4.5 1.6 110 chr3R 11085460 3` UTR CR44940 - chr3R 11085515 intergenic CR44940 - chr3R 11085570 intergenic CR44940 - chr3R_9_11085001 chr3R_11085001 RAL-492 1957 chr3R 11085759 11085801 chr3R 11086074 11086116 8 315 7.0 4.5 5.8 1.2 357 chr3R 11085759 intergenic CR44940 - chr3R 11085938 intergenic CR44940 - chr3R 11086116 intergenic not near genes chr3R_8_11085001 chr3R_11085001 RAL-492 1958 chr3R 11155028 11155069 chr3R 11155126 11155167 17 97 3.0 5.0 4.0 3.4 139 chr3R 11155028 intron Ugt86Dc + chr3R 11155098 intron Ugt86Dc + chr3R 11155167 intron Ugt86Dc + chr3R_17_11155001 chr3R_11155001 RAL-492 1959 chr3R 11172795 11172818 chr3R 11172902 11172929 8 110 5.0 4.5 4.8 1.4 134 chr3R 11172795 intergenic Ugt35a - chr3R 11172862 intergenic Ugt35a - chr3R 11172929 intergenic Ugt35a - chr3R_8_11170001 chr3R_11170001 RAL-492 1960 chr3R 11174573 11174614 chr3R 11175307 11175339 9 729 25.0 25.0 25.0 0.3 766 chr3R 11174573 exon Ugt86Dj - chr3R 11174956 intron Ugt86Dj - chr3R 11175339 exon Ugt86Dj - chr3R_9_11170001 chr3R_11170001 RAL-492 1961 chr3R 11197966 11198009 chr3R 11198085 11198128 11 118 4.0 4.5 4.2 2.1 162 chr3R 11197966 intron cu + chr3R 11198047 intron cu + chr3R 11198128 intron cu + chr3R_11_11195001 chr3R_11195001 RAL-492 1962 chr3R 11248860 11248912 chr3R 11248987 11249010 8 125 1.5 4.0 2.8 2.1 150 chr3R 11248860 3` UTR CR43283 - chr3R 11248935 3` UTR CR43283 - chr3R 11249010 3` UTR CR43283 - chr3R_8_11245001 chr3R_11245001 RAL-492 1963 chr3R 11379219 11379265 chr3R 11388394 11388412 roo 14 9169 4.5 4.0 4.2 2.7 9193 chr3R 11379219 intron pros + chr3R 11383816 intron pros + chr3R 11388412 intron pros + chr3R_14_11380001 chr3R_11380001 RAL-492 1964 chr3R 11398705 11398751 chr3R 11398801 11398845 13 93 1.0 6.0 3.5 2.9 140 chr3R 11398705 3` UTR pros + chr3R 11398775 3` UTR pros + chr3R 11398845 3` UTR pros + chr3R_13_11395001 chr3R_11395001 RAL-492 1965 chr3R 11438927 11438940 chr3R 11439026 11439063 5 108 6.5 10.0 8.2 0.5 136 chr3R 11438927 intron,intron sals -,CG17230 + chr3R 11438995 intron,intron sals -,CG17230 + chr3R 11439063 intron,intron sals -,CG17230 + chr3R_5_11435001 chr3R_11435001 RAL-492 1966 chr3R 11479357 11479406 chr3R 11479631 11479675 9 272 5.0 1.5 3.2 2.1 318 chr3R 11479357 intergenic not near genes chr3R 11479516 intergenic not near genes chr3R 11479675 intergenic not near genes chr3R_9_11475001 chr3R_11475001 RAL-492 1967 chr3R 11485536 11485584 chr3R 11485641 11485677 13 105 2.5 4.0 3.2 3.1 141 chr3R 11485536 intergenic not near genes chr3R 11485606 intergenic not near genes chr3R 11485677 intergenic not near genes chr3R_13_11485001 chr3R_11485001 RAL-492 1968 chr3R 11518800 11518841 chr3R 11518910 11518951 10 106 2.0 4.5 3.2 2.4 151 chr3R 11518800 intergenic not near genes chr3R 11518876 intergenic not near genes chr3R 11518951 intergenic not near genes chr3R_10_11515001 chr3R_11515001 RAL-492 1969 chr3R 11567781 11567800 chr3R 11567873 11567905 4 98 1.5 3.5 2.5 1.1 124 chr3R 11567781 intergenic not near genes chr3R 11567843 intergenic not near genes chr3R 11567905 intergenic not near genes chr3R_4_11565001 chr3R_11565001 RAL-492 1970 chr3R 11637664 11637706 chr3R 11638167 11638214 14 508 6.0 4.0 5.0 2.3 550 chr3R 11637664 intron,5` UTR Csk -,CR44137 + chr3R 11637939 intron,intron Csk -,CR44137 + chr3R 11638214 intron,5` UTR Csk -,CR44137 + chr3R_14_11635001 chr3R_11635001 RAL-492 1971 chr3R 11640487 11640542 chr3R 11640602 11640657 26 114 3.5 4.5 4.0 5.2 170 chr3R 11640487 intron Csk - chr3R 11640572 intron Csk - chr3R 11640657 intron Csk - chr3R_26_11640001 chr3R_11640001 RAL-492 1972 chr3R 11694704 11694737 chr3R 11694817 11694850 8 113 3.5 0.0 1.8 2.9 146 chr3R 11694704 intergenic Fer3 - chr3R 11694777 intergenic Fer3 - chr3R 11694850 intergenic not near genes chr3R_8_11690001 chr3R_11690001 RAL-492 1973 chr3R 11722008 11722058 chr3R 11722120 11722169 15 109 3.5 6.0 4.8 2.6 161 chr3R 11722008 5` UTR CG12594 + chr3R 11722088 5` UTR CG12594 + chr3R 11722169 5` UTR CG12594 + chr3R_15_11720001 chr3R_11720001 RAL-492 1974 chr3R 11723498 11723543 chr3R 11723599 11723623 11 93 4.5 4.0 4.2 2.1 125 chr3R 11723498 intron CG12594 + chr3R 11723560 intron CG12594 + chr3R 11723623 intron CG12594 + chr3R_11_11720001 chr3R_11720001 RAL-492 1975 chr3R 11841055 11841098 chr3R 11846254 11846276 BS 9 5196 3.5 2.5 3.0 2.2 5221 chr3R 11841055 intron CG6959 - chr3R 11843666 intron CG6959 - chr3R 11846276 intron CG6959 - chr3R_9_11840001 chr3R_11840001 RAL-492 1976 chr3R 11865826 11865870 chr3R 11865941 11865985 12 113 5.5 1.0 3.2 2.9 159 chr3R 11865826 intron CG6959 - chr3R 11865906 intron CG6959 - chr3R 11865985 intron CG6959 - chr3R_12_11865001 chr3R_11865001 RAL-492 1977 chr3R 11908365 11908417 chr3R 11908558 11908610 9 195 29.0 27.0 28.0 0.3 245 chr3R 11908365 intron Cad87A - chr3R 11908488 intron Cad87A - chr3R 11908610 intron Cad87A - chr3R_9_11905001 chr3R_11905001 RAL-492 1978 chr3R 11957836 11957867 chr3R 11958139 11958170 S-element 5 303 2.5 0.0 1.2 2.3 334 chr3R 11957836 intergenic not near genes chr3R 11958003 intergenic not near genes chr3R 11958170 intergenic not near genes chr3R_5_11955001 chr3R_11955001 RAL-492 1979 chr3R 12022870 12022912 chr3R 12025065 12025109 pogo 15 2196 4.5 5.0 4.8 2.6 2239 chr3R 12022870 intergenic not near genes chr3R 12023990 intergenic not near genes chr3R 12025109 intergenic not near genes chr3R_15_12020001 chr3R_12020001 RAL-492 1980 chr3R 12045154 12045172 chr3R 12045250 12045267 13 94 6.0 1.0 3.5 2.9 113 chr3R 12045154 intergenic not near genes chr3R 12045210 intergenic not near genes chr3R 12045267 intergenic not near genes chr3R_13_12045001 chr3R_12045001 RAL-492 1981 chr3R 12066055 12066099 chr3R 12066156 12066200 11 98 0.5 2.5 1.5 4.4 145 chr3R 12066055 intergenic not near genes chr3R 12066128 intergenic not near genes chr3R 12066200 intergenic not near genes chr3R_11_12065001 chr3R_12065001 RAL-492 1982 chr3R 12080844 12080898 chr3R 12080941 12080995 16 93 2.5 9.0 5.8 2.4 151 chr3R 12080844 intron CG14741 - chr3R 12080920 intron CG14741 - chr3R 12080995 intron CG14741 - chr3R_16_12080001 chr3R_12080001 RAL-492 1983 chr3R 12165855 12165895 chr3R 12165952 12165993 8 98 2.5 6.5 4.5 1.5 138 chr3R 12165855 intron Cpn - chr3R 12165924 intron Cpn - chr3R 12165993 intron Cpn - chr3R_8_12165001 chr3R_12165001 RAL-492 1984 chr3R 12267836 12267886 chr3R 12267936 12267986 11 99 3.0 0.5 1.8 3.9 150 chr3R 12267836 intron svp + chr3R 12267911 intron svp + chr3R 12267986 intron svp + chr3R_11_12265001 chr3R_12265001 RAL-492 1985 chr3R 12297631 12297645 chr3R 12297728 12297740 4 94 10.5 9.0 9.8 0.4 109 chr3R 12297631 intron svp + chr3R 12297686 intron svp + chr3R 12297740 intron svp + chr3R_4_12295001 chr3R_12295001 RAL-492 1986 chr3R 12392871 12392896 chr3R 12392990 12393000 7 113 6.0 10.5 8.2 0.8 129 chr3R 12392871 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12392936 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12393000 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R_7_12390001 chr3R_12390001 RAL-492 1987 chr3R 12394692 12394729 chr3R 12401209 12401248 13 6516 38.0 45.0 41.5 0.3 6556 chr3R 12394692 intron,5` UTR,exon CG34402 +,CG10096 -,CG10097 - chr3R 12397970 intron CG34402 + chr3R 12401248 intron,exon CG34402 +,lig3 - chr3R_13_12395001 chr3R_12395001 RAL-492 1988 chr3R 12406495 12406502 chr3R 12406587 12406606 4 101 8.5 5.0 6.8 0.5 111 chr3R 12406495 intergenic CG5167 +,Cyp9f2 - chr3R 12406550 5` UTR CG5167 + chr3R 12406606 5` UTR CG5167 + chr3R_4_12405001 chr3R_12405001 RAL-492 1989 chr3R 12406509 12406516 chr3R 12406583 12406611 4 90 6.0 5.0 5.5 0.6 102 chr3R 12406509 intergenic CG5167 +,Cyp9f2 - chr3R 12406560 5` UTR CG5167 + chr3R 12406611 5` UTR CG5167 + chr3R_4_12405001 chr3R_12405001 RAL-492 1990 chr3R 12538166 12538204 chr3R 12538265 12538302 4 98 2.0 1.5 1.8 1.4 136 chr3R 12538166 intron Octbeta3R - chr3R 12538234 intron Octbeta3R - chr3R 12538302 intron Octbeta3R - chr3R_4_12535001 chr3R_12535001 RAL-492 1991 chr3R 12599356 12599380 chr3R 12599459 12599471 4 100 4.5 5.0 4.8 0.7 115 chr3R 12599356 intergenic not near genes chr3R 12599414 intergenic not near genes chr3R 12599471 intergenic not near genes chr3R_4_12595001 chr3R_12595001 RAL-492 1992 chr3R 12599383 12599405 chr3R 12599456 12599459 4 76 3.0 4.5 3.8 0.8 76 chr3R 12599383 intergenic not near genes chr3R 12599421 intergenic not near genes chr3R 12599459 intergenic not near genes chr3R_4_12595001 chr3R_12595001 RAL-492 1993 chr3R 12706464 12706480 chr3R 12715788 12715811 4 9310 37.0 38.5 37.8 0.1 9347 chr3R 12706464 exon mus308 - chr3R 12711138 exon mus308 - chr3R 12715811 intron Men - chr3R_4_12710001 chr3R_12710001 RAL-492 1994 chr3R 12742463 12742505 chr3R 12742554 12742586 12 96 1.5 4.5 3.0 3.0 123 chr3R 12742463 exon CG5999 - chr3R 12742524 exon CG5999 - chr3R 12742586 exon CG5999 - chr3R_12_12740001 chr3R_12740001 RAL-492 1995 chr3R 12763113 12763148 chr3R 12763207 12763245 12 97 2.5 4.0 3.2 2.9 132 chr3R 12763113 intron beat-Vc - chr3R 12763179 intron beat-Vc - chr3R 12763245 intron beat-Vc - chr3R_12_12760001 chr3R_12760001 RAL-492 1996 chr3R 12787928 12787945 chr3R 12788031 12788048 5 103 4.0 4.0 4.0 1.0 120 chr3R 12787928 intergenic not near genes chr3R 12787988 intergenic not near genes chr3R 12788048 intergenic not near genes chr3R_5_12785001 chr3R_12785001 RAL-492 1997 chr3R 12805843 12805883 chr3R 12805949 12805989 7 105 2.0 1.0 1.5 2.8 146 chr3R 12805843 intergenic not near genes chr3R 12805916 intergenic not near genes chr3R 12805989 intergenic not near genes chr3R_7_12805001 chr3R_12805001 RAL-492 1998 chr3R 12819009 12819045 chr3R 12819109 12819148 9 102 3.5 3.0 3.2 2.1 139 chr3R 12819009 intergenic not near genes chr3R 12819078 intergenic not near genes chr3R 12819148 intergenic not near genes chr3R_9_12815001 chr3R_12815001 RAL-492 1999 chr3R 12825812 12825855 chr3R 12825908 12825954 16 92 3.5 3.0 3.2 3.8 142 chr3R 12825812 intergenic not near genes chr3R 12825883 intergenic not near genes chr3R 12825954 intergenic not near genes chr3R_16_12825001 chr3R_12825001 RAL-492 2000 chr3R 12858728 12858766 chr3R 12858828 12858867 8 101 4.5 5.0 4.8 1.4 139 chr3R 12858728 intron CG10126 - chr3R 12858798 intron CG10126 - chr3R 12858867 intron CG10126 - chr3R_8_12855001 chr3R_12855001 RAL-492 2001 chr3R 12866468 12866520 chr3R 12866639 12866691 20 170 3.0 4.5 3.8 4.2 223 chr3R 12866468 intergenic not near genes chr3R 12866580 intergenic not near genes chr3R 12866691 intergenic not near genes chr3R_20_12865001 chr3R_12865001 RAL-492 2002 chr3R 12920160 12920183 chr3R 12925381 12925403 copia 5 5218 4.0 6.5 5.2 0.8 5243 chr3R 12920160 intron beat-Vb + chr3R 12922782 intron beat-Vb + chr3R 12925403 intron beat-Vb + chr3R_5_12920001 chr3R_12920001 RAL-492 2003 chr3R 12930162 12930213 chr3R 12930414 12930464 17 250 3.0 4.5 3.8 3.5 302 chr3R 12930162 intron beat-Vb + chr3R 12930313 intron beat-Vb + chr3R 12930464 intron beat-Vb + chr3R_17_12930001 chr3R_12930001 RAL-492 2004 chr3R 12931214 12931245 chr3R 12931311 12931315 16 93 4.0 5.0 4.5 2.9 101 chr3R 12931214 intron,3` UTR beat-Vb +,CR44236 - chr3R 12931264 intron,3` UTR beat-Vb +,CR44236 - chr3R 12931315 intron,3` UTR beat-Vb +,CR44236 - chr3R_16_12930001 chr3R_12930001 RAL-492 2005 chr3R 13104419 13104420 chr3R 21907534 21907536 19 8803115 26.5 20.5 23.5 0.8 8803117 chr3R 13104419 intron timeout + chr3R 17505978 intergenic Dscam3 - chr3R 21907536 intergenic CG6678 + chr3R_19_17505001 chr3R_17505001 RAL-492 2006 chr3R 13120757 13120768 chr3R 13120854 13120865 5 95 9.0 1.5 5.2 0.8 108 chr3R 13120757 intron timeout + chr3R 13120811 intron timeout + chr3R 13120865 intron timeout + chr3R_5_13120001 chr3R_13120001 RAL-492 2007 chr3R 13128834 13128855 chr3R 13130650 13130670 5 1815 2.5 4.5 3.5 1.1 1836 chr3R 13128834 intron,intron timeout +,2mit - chr3R 13129752 intron,intron timeout +,2mit - chr3R 13130670 intron,intron timeout +,2mit - chr3R_5_13125001 chr3R_13125001 RAL-492 2008 chr3R 13135818 13135838 chr3R 13138003 13138021 pogo 8 2184 8.5 1.5 5.0 1.3 2203 chr3R 13135818 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136920 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138021 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_8_13135001 chr3R_13135001 RAL-492 2009 chr3R 13143020 13143064 chr3R 13148617 13148633 mdg3 10 5588 3.0 4.5 3.8 2.1 5613 chr3R 13143020 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145826 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148633 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_10_13145001 chr3R_13145001 RAL-492 2010 chr3R 13195943 13195984 chr3R 13196045 13196099 11 108 6.5 3.5 5.0 1.8 156 chr3R 13195943 intergenic not near genes chr3R 13196021 intergenic not near genes chr3R 13196099 intergenic not near genes chr3R_11_13195001 chr3R_13195001 RAL-492 2011 chr3R 13418647 13418670 chr3R 13418740 13418758 6 94 5.5 2.5 4.0 1.2 111 chr3R 13418647 intergenic not near genes chr3R 13418702 intergenic not near genes chr3R 13418758 intergenic not near genes chr3R_6_13415001 chr3R_13415001 RAL-492 2012 chr3R 13435370 13435399 chr3R 13435563 13435589 9 194 4.5 3.0 3.8 1.9 219 chr3R 13435370 intergenic yrt - chr3R 13435480 intergenic yrt - chr3R 13435589 intergenic not near genes chr3R_9_13435001 chr3R_13435001 RAL-492 2013 chr3R 13526677 13526708 chr3R 13526776 13526807 10 98 4.5 4.0 4.2 1.9 130 chr3R 13526677 intergenic not near genes chr3R 13526742 intergenic not near genes chr3R 13526807 intergenic not near genes chr3R_10_13525001 chr3R_13525001 RAL-492 2014 chr3R 13528042 13528077 chr3R 13528217 13528241 8 168 4.0 6.0 5.0 1.3 199 chr3R 13528042 intergenic not near genes chr3R 13528142 intergenic CG42778 - chr3R 13528241 intergenic CG42778 - chr3R_8_13525001 chr3R_13525001 RAL-492 2015 chr3R 13580823 13580830 chr3R 13580920 13580927 5 97 9.0 15.5 12.2 0.4 104 chr3R 13580823 intergenic not near genes chr3R 13580875 intergenic not near genes chr3R 13580927 intergenic not near genes chr3R_5_13580001 chr3R_13580001 RAL-492 2016 chr3R 13617657 13617681 chr3R 13617784 13617807 7 126 5.5 1.0 3.2 1.7 150 chr3R 13617657 intergenic CR45680 - chr3R 13617732 intergenic CR45680 - chr3R 13617807 3` UTR CR45680 - chr3R_7_13615001 chr3R_13615001 RAL-492 2017 chr3R 13617682 13617711 chr3R 13617782 13617837 7 119 3.0 0.5 1.8 2.5 155 chr3R 13617682 intergenic CR45680 - chr3R 13617760 3` UTR CR45680 - chr3R 13617837 3` UTR CR45680 - chr3R_7_13615001 chr3R_13615001 RAL-492 2018 chr3R 13683405 13683435 chr3R 13683516 13683531 7 108 0.0 2.5 1.2 3.2 126 chr3R 13683405 intron omd - chr3R 13683468 intron omd - chr3R 13683531 intron omd - chr3R_7_13680001 chr3R_13680001 RAL-492 2019 chr3R 13693026 13693028 chr3R 21907534 21907536 13 8214507 19.0 20.5 19.8 0.6 8214510 chr3R 13693026 3` UTR flfl + chr3R 17800281 exon CG17803 - chr3R 21907536 intergenic CG6678 + chr3R_13_17800001 chr3R_17800001 RAL-492 2020 chr3R 13714505 13714551 chr3R 13714664 13714710 11 158 0.0 2.0 1.0 5.5 205 chr3R 13714505 intergenic CR34044 - chr3R 13714608 intergenic CR34044 - chr3R 13714710 intergenic CG34383 + chr3R_11_13710001 chr3R_13710001 RAL-492 2021 chr3R 13830736 13830783 chr3R 13830920 13830967 7 182 0.5 2.0 1.2 3.2 231 chr3R 13830736 intergenic not near genes chr3R 13830852 intergenic not near genes chr3R 13830967 intergenic not near genes chr3R_7_13830001 chr3R_13830001 RAL-492 2022 chr3R 13863661 13863664 chr3R 13863769 13863772 5 107 13.5 3.0 8.2 0.5 111 chr3R 13863661 intergenic not near genes chr3R 13863716 intergenic not near genes chr3R 13863772 intergenic not near genes chr3R_5_13860001 chr3R_13860001 RAL-492 2023 chr3R 13863668 13863714 chr3R 13863768 13863807 14 104 3.0 3.0 3.0 3.5 139 chr3R 13863668 intergenic not near genes chr3R 13863738 intergenic not near genes chr3R 13863807 intergenic not near genes chr3R_14_13860001 chr3R_13860001 RAL-492 2024 chr3R 13948211 13948253 chr3R 13948306 13948350 7 97 3.5 3.5 3.5 1.6 139 chr3R 13948211 intergenic CG31517 + chr3R 13948280 intergenic CG31517 + chr3R 13948350 intergenic CG31517 + chr3R_7_13945001 chr3R_13945001 RAL-492 2025 chr3R 13975354 13975403 chr3R 13975452 13975501 11 96 3.5 3.5 3.5 2.4 147 chr3R 13975354 intron rdx - chr3R 13975428 intron rdx - chr3R 13975501 intron rdx - chr3R_11_13975001 chr3R_13975001 RAL-492 2026 chr3R 14037564 14037586 chr3R 14037665 14037670 6 98 4.5 5.5 5.0 1.0 106 chr3R 14037564 intergenic not near genes chr3R 14037617 intergenic not near genes chr3R 14037670 intergenic not near genes chr3R_6_14035001 chr3R_14035001 RAL-492 2027 chr3R 14062821 14062870 chr3R 14062918 14062964 12 94 2.0 5.0 3.5 2.7 143 chr3R 14062821 intron foxo + chr3R 14062892 intron foxo + chr3R 14062964 intron foxo + chr3R_12_14060001 chr3R_14060001 RAL-492 2028 chr3R 14067127 14067154 chr3R 14067226 14067252 6 98 4.5 2.0 3.2 1.4 125 chr3R 14067127 exon foxo + chr3R 14067190 intron foxo + chr3R 14067252 intron foxo + chr3R_6_14065001 chr3R_14065001 RAL-492 2029 chr3R 14077613 14077652 chr3R 14077710 14077749 7 92 5.0 1.5 3.2 1.7 136 chr3R 14077613 intron foxo + chr3R 14077681 intron foxo + chr3R 14077749 intron foxo + chr3R_7_14075001 chr3R_14075001 RAL-492 2030 chr3R 14117427 14117465 chr3R 14117523 14117561 8 94 4.0 3.0 3.5 1.8 134 chr3R 14117427 intron Kif19A - chr3R 14117494 intron Kif19A - chr3R 14117561 intron Kif19A - chr3R_8_14115001 chr3R_14115001 RAL-492 2031 chr3R 14174939 14174990 chr3R 14175044 14175097 27 99 5.0 4.0 4.5 4.9 158 chr3R 14174939 3` UTR Dop1R1 - chr3R 14175018 3` UTR Dop1R1 - chr3R 14175097 3` UTR Dop1R1 - chr3R_27_14175001 chr3R_14175001 RAL-492 2032 chr3R 14180800 14180833 chr3R 14185585 14185618 F-element 4 4784 3.0 3.0 3.0 1.0 4818 chr3R 14180800 intron Dop1R1 - chr3R 14183209 intron Dop1R1 - chr3R 14185618 intron Dop1R1 - chr3R_4_14180001 chr3R_14180001 RAL-492 2033 chr3R 14194422 14194456 chr3R 14203580 14203625 roo 9 9162 6.0 4.0 5.0 1.5 9203 chr3R 14194422 intron Dop1R1 - chr3R 14199024 intron Dop1R1 - chr3R 14203625 intron Dop1R1 - chr3R_9_14195001 chr3R_14195001 RAL-492 2034 chr3R 14210210 14210252 chr3R 14210311 14210353 13 100 4.0 1.0 2.5 3.7 143 chr3R 14210210 intron Dop1R1 - chr3R 14210282 intron Dop1R1 - chr3R 14210353 intron Dop1R1 - chr3R_13_14210001 chr3R_14210001 RAL-492 2035 chr3R 14235680 14235722 chr3R 14235783 14235825 11 103 3.0 3.5 3.2 2.6 145 chr3R 14235680 intergenic not near genes chr3R 14235752 intergenic not near genes chr3R 14235825 intergenic not near genes chr3R_11_14235001 chr3R_14235001 RAL-492 2036 chr3R 14246375 14246418 chr3R 14247891 14247891 jockey 10 1500 5.5 7.0 6.2 1.4 1516 chr3R 14246375 intergenic not near genes chr3R 14247133 intergenic not near genes chr3R 14247891 intergenic not near genes chr3R_10_14245001 chr3R_14245001 RAL-492 2037 chr3R 14258199 14258211 chr3R 14258259 14258310 7 87 1.5 4.0 2.8 1.8 111 chr3R 14258199 intron Aats-met - chr3R 14258254 intron Aats-met - chr3R 14258310 intron Aats-met - chr3R_7_14255001 chr3R_14255001 RAL-492 2038 chr3R 14294024 14294068 chr3R 14294122 14294165 12 95 2.0 8.0 5.0 2.0 141 chr3R 14294024 intron CG12207 + chr3R 14294094 intron CG12207 + chr3R 14294165 intron CG12207 + chr3R_12_14290001 chr3R_14290001 RAL-492 2039 chr3R 14363723 14363744 chr3R 14363825 14363846 5 101 7.5 7.5 7.5 0.6 123 chr3R 14363723 intron NK7.1 - chr3R 14363784 intron NK7.1 - chr3R 14363846 intron NK7.1 - chr3R_5_14360001 chr3R_14360001 RAL-492 2040 chr3R 14414680 14414726 chr3R 14414801 14414804 20 113 8.0 4.5 6.2 2.8 124 chr3R 14414680 intron cv-c - chr3R 14414742 intron cv-c - chr3R 14414804 intron cv-c - chr3R_20_14410001 chr3R_14410001 RAL-492 2041 chr3R 14458910 14458914 chr3R 14458982 14459014 4 88 0.0 6.5 3.2 1.0 104 chr3R 14458910 intron cv-c - chr3R 14458962 intron cv-c - chr3R 14459014 intron cv-c - chr3R_4_14455001 chr3R_14455001 RAL-492 2042 chr3R 14469778 14469828 chr3R 14469874 14469924 13 94 4.5 3.5 4.0 2.6 146 chr3R 14469778 intron cv-c - chr3R 14469851 intron cv-c - chr3R 14469924 intron cv-c - chr3R_13_14465001 chr3R_14465001 RAL-492 2043 chr3R 14497386 14497435 chr3R 14497486 14497536 20 100 5.0 2.5 3.8 4.2 150 chr3R 14497386 intron CR44177 + chr3R 14497461 intron CR44177 + chr3R 14497536 intron CR44177 + chr3R_20_14495001 chr3R_14495001 RAL-492 2044 chr3R 14527391 14527413 chr3R 14527485 14527507 13 96 8.0 6.0 7.0 1.6 116 chr3R 14527391 intron Pde6 - chr3R 14527449 intron Pde6 - chr3R 14527507 intron Pde6 - chr3R_13_14525001 chr3R_14525001 RAL-492 2045 chr3R 14546051 14546067 chr3R 14546148 14546163 7 95 3.5 2.5 3.0 1.8 112 chr3R 14546051 intron Pde6 - chr3R 14546107 intron Pde6 - chr3R 14546163 intron Pde6 - chr3R_7_14545001 chr3R_14545001 RAL-492 2046 chr3R 14549790 14549833 chr3R 14549884 14549929 16 93 3.0 8.0 5.5 2.5 139 chr3R 14549790 intron Pde6 - chr3R 14549860 intron Pde6 - chr3R 14549929 intron Pde6 - chr3R_16_14545001 chr3R_14545001 RAL-492 2047 chr3R 14608451 14608477 chr3R 14608563 14608589 8 112 5.0 5.0 5.0 1.3 138 chr3R 14608451 intergenic stumps + chr3R 14608520 intergenic stumps + chr3R 14608589 intergenic not near genes chr3R_8_14605001 chr3R_14605001 RAL-492 2048 chr3R 14694815 14694859 chr3R 14694925 14694969 14 109 5.5 4.0 4.8 2.4 154 chr3R 14694815 intron Meltrin - chr3R 14694892 intron Meltrin - chr3R 14694969 intron Meltrin - chr3R_14_14690001 chr3R_14690001 RAL-492 2049 chr3R 14704383 14704414 chr3R 14704460 14704505 13 94 3.5 4.5 4.0 2.6 122 chr3R 14704383 intron kibra - chr3R 14704444 intron kibra - chr3R 14704505 intron kibra - chr3R_13_14700001 chr3R_14700001 RAL-492 2050 chr3R 14764549 14764589 chr3R 14764667 14764709 5 119 0.5 1.0 0.8 2.8 160 chr3R 14764549 intron jvl + chr3R 14764629 intron jvl + chr3R 14764709 intron jvl + chr3R_5_14760001 chr3R_14760001 RAL-492 2051 chr3R 14787113 14787141 chr3R 14787547 14787575 12 431 10.0 3.5 6.8 1.5 462 chr3R 14787113 intron jvl + chr3R 14787344 intron jvl + chr3R 14787575 intron jvl + chr3R_12_14785001 chr3R_14785001 RAL-492 2052 chr3R 14806659 14806704 chr3R 14806754 14806801 24 91 5.5 3.0 4.2 4.6 142 chr3R 14806659 3` UTR btsz - chr3R 14806730 3` UTR btsz - chr3R 14806801 3` UTR btsz - chr3R_24_14805001 chr3R_14805001 RAL-492 2053 chr3R 14836678 14836730 chr3R 14836783 14836834 16 102 2.5 3.0 2.8 4.2 156 chr3R 14836678 intron btsz - chr3R 14836756 intron btsz - chr3R 14836834 intron btsz - chr3R_16_14835001 chr3R_14835001 RAL-492 2054 chr3R 14874795 14874840 chr3R 14874899 14874903 13 92 4.0 3.0 3.5 2.9 108 chr3R 14874795 intron btsz - chr3R 14874849 intron btsz - chr3R 14874903 intron btsz - chr3R_13_14870001 chr3R_14870001 RAL-492 2055 chr3R 14954785 14954836 chr3R 14955017 14955068 11 232 2.5 1.5 2.0 3.7 283 chr3R 14954785 intergenic not near genes chr3R 14954926 intergenic not near genes chr3R 14955068 intergenic not near genes chr3R_11_14950001 chr3R_14950001 RAL-492 2056 chr3R 15036533 15036575 chr3R 15036624 15036647 14 92 2.5 5.0 3.8 2.9 114 chr3R 15036533 intergenic not near genes chr3R 15036590 intergenic not near genes chr3R 15036647 intergenic not near genes chr3R_14_15035001 chr3R_15035001 RAL-492 2057 chr3R 15041417 15041450 chr3R 15045205 15045238 Doc 5 3788 0.0 6.0 3.0 1.2 3821 chr3R 15041417 intergenic not near genes chr3R 15043328 intergenic not near genes chr3R 15045238 intergenic not near genes chr3R_5_15040001 chr3R_15040001 RAL-492 2058 chr3R 15049444 15049486 chr3R 15049582 15049632 13 144 3.5 6.0 4.8 2.2 188 chr3R 15049444 intergenic not near genes chr3R 15049538 intergenic not near genes chr3R 15049632 intergenic not near genes chr3R_13_15045001 chr3R_15045001 RAL-492 2059 chr3R 15059260 15059480 chr3R 15059474 15059583 BS 10 167 0.0 0.0 0.0 10.0 323 chr3R 15059260 intron dpr9 - chr3R 15059422 intron dpr9 - chr3R 15059583 intron dpr9 - chr3R_10_15055001 chr3R_15055001 RAL-492 2060 chr3R 15061017 15061035 chr3R 15061117 15061136 4 101 3.0 3.0 3.0 1.0 119 chr3R 15061017 intron dpr9 - chr3R 15061076 intron dpr9 - chr3R 15061136 intron dpr9 - chr3R_4_15060001 chr3R_15060001 RAL-492 2061 chr3R 15067618 15067669 chr3R 15067839 15067889 13 220 2.5 3.5 3.0 3.2 271 chr3R 15067618 intron dpr9 - chr3R 15067754 intron dpr9 - chr3R 15067889 intron dpr9 - chr3R_13_15065001 chr3R_15065001 RAL-492 2062 chr3R 15076653 15076689 chr3R 15076736 15076774 9 93 2.5 8.0 5.2 1.5 121 chr3R 15076653 intron dpr9 - chr3R 15076714 intron dpr9 - chr3R 15076774 intron dpr9 - chr3R_9_15075001 chr3R_15075001 RAL-492 2063 chr3R 15078347 15078371 chr3R 15078424 15078471 13 94 3.0 4.0 3.5 2.9 124 chr3R 15078347 intergenic CG6974 - chr3R 15078409 intergenic CG6974 - chr3R 15078471 intergenic CG6974 - chr3R_13_15075001 chr3R_15075001 RAL-492 2064 chr3R 15079792 15079815 chr3R 15080053 15080074 pogo 5 260 7.0 0.5 3.8 1.0 282 chr3R 15079792 3` UTR CG6966 - chr3R 15079933 3` UTR CG6966 - chr3R 15080074 3` UTR CG6966 - chr3R_5_15075001 chr3R_15075001 RAL-492 2065 chr3R 15102492 15102519 chr3R 15109763 15109794 412 6 7272 2.5 1.5 2.0 2.0 7302 chr3R 15102492 intron CG42788 - chr3R 15106143 intron CG42788 - chr3R 15109794 intron CG42788 - chr3R_6_15105001 chr3R_15105001 RAL-492 2066 chr3R 15132045 15132076 chr3R 15135124 15135156 Juan 12 3077 8.5 11.5 10.0 1.1 3111 chr3R 15132045 intergenic CG42788 - chr3R 15133600 intergenic not near genes chr3R 15135156 3` UTR CG6912 - chr3R_12_15130001 chr3R_15130001 RAL-492 2067 chr3R 15156199 15156209 chr3R 15156365 15156376 5 167 8.5 0.0 4.2 1.0 177 chr3R 15156199 intron Gyc88E + chr3R 15156288 intron Gyc88E + chr3R 15156376 intron Gyc88E + chr3R_5_15155001 chr3R_15155001 RAL-492 2068 chr3R 15160544 15160587 chr3R 15160662 15160705 11 118 3.0 4.5 3.8 2.3 161 chr3R 15160544 intron Gyc88E + chr3R 15160624 intron Gyc88E + chr3R 15160705 intron Gyc88E + chr3R_11_15160001 chr3R_15160001 RAL-492 2069 chr3R 15162530 15162563 chr3R 15167318 15167351 F-element 9 4787 7.5 5.5 6.5 1.2 4821 chr3R 15162530 intron Gyc88E + chr3R 15164940 intron Gyc88E + chr3R 15167351 intron Gyc88E + chr3R_9_15160001 chr3R_15160001 RAL-492 2070 chr3R 15286987 15286989 chr3R 21907534 21907535 7 6620548 15.0 20.5 17.8 0.4 6620548 chr3R 15286987 intron Tm1 + chr3R 18597261 intron,exon qin +,CG14304 - chr3R 21907535 intergenic CG6678 + chr3R_7_18595001 chr3R_18595001 RAL-492 2071 chr3R 15445891 15445905 chr3R 15445996 15446008 7 105 4.5 0.0 2.2 2.2 117 chr3R 15445891 exon AdamTS-A - chr3R 15445950 intron AdamTS-A - chr3R 15446008 intron AdamTS-A - chr3R_7_15445001 chr3R_15445001 RAL-492 2072 chr3R 15592878 15592922 chr3R 15592982 15593026 9 103 1.5 2.0 1.8 3.2 148 chr3R 15592878 intergenic not near genes chr3R 15592952 intergenic not near genes chr3R 15593026 intergenic not near genes chr3R_9_15590001 chr3R_15590001 RAL-492 2073 chr3R 15594659 15594676 chr3R 15594762 15594778 7 102 0.0 10.5 5.2 1.1 119 chr3R 15594659 intergenic not near genes chr3R 15594718 intergenic not near genes chr3R 15594778 intergenic not near genes chr3R_7_15590001 chr3R_15590001 RAL-492 2074 chr3R 15601151 15601196 chr3R 15608692 15608737 412 12 7536 5.0 4.0 4.5 2.2 7586 chr3R 15601151 intergenic not near genes chr3R 15604944 intergenic not near genes chr3R 15608737 intergenic not near genes chr3R_12_15600001 chr3R_15600001 RAL-492 2075 chr3R 15618710 15618762 chr3R 15626204 15626256 blood 7 7489 2.0 7.0 4.5 1.3 7546 chr3R 15618710 intergenic not near genes chr3R 15622483 intergenic not near genes chr3R 15626256 intergenic not near genes chr3R_7_15620001 chr3R_15620001 RAL-492 2076 chr3R 15691168 15691331 chr3R 15691288 15691438 13 109 0.0 0.0 0.0 13.0 270 chr3R 15691168 intergenic not near genes chr3R 15691303 intergenic not near genes chr3R 15691438 intergenic not near genes chr3R_13_15690001 chr3R_15690001 RAL-492 2077 chr3R 15747780 15747833 chr3R 15747883 15747918 14 101 2.0 2.0 2.0 4.7 138 chr3R 15747780 intergenic not near genes chr3R 15747849 intergenic not near genes chr3R 15747918 intergenic not near genes chr3R_14_15745001 chr3R_15745001 RAL-492 2078 chr3R 15766331 15766345 chr3R 15766466 15766482 4 135 8.5 6.5 7.5 0.5 151 chr3R 15766331 3` UTR CG5623 - chr3R 15766406 3` UTR CG5623 - chr3R 15766482 exon CG5623 - chr3R_4_15765001 chr3R_15765001 RAL-492 2079 chr3R 15766354 15766376 chr3R 15766457 15766497 8 124 2.0 3.5 2.8 2.1 143 chr3R 15766354 3` UTR CG5623 - chr3R 15766426 3` UTR CG5623 - chr3R 15766497 exon CG5623 - chr3R_8_15765001 chr3R_15765001 RAL-492 2080 chr3R 15878071 15878094 chr3R 15878179 15878201 6 107 4.0 3.0 3.5 1.3 130 chr3R 15878071 intergenic not near genes chr3R 15878136 intergenic not near genes chr3R 15878201 intergenic not near genes chr3R_6_15875001 chr3R_15875001 RAL-492 2081 chr3R 16023846 16023891 chr3R 16023943 16023987 8 94 2.5 3.5 3.0 2.0 141 chr3R 16023846 intergenic not near genes chr3R 16023916 intergenic not near genes chr3R 16023987 intergenic not near genes chr3R_8_16020001 chr3R_16020001 RAL-492 2082 chr3R 16048842 16048882 chr3R 16048944 16048983 11 99 3.5 4.5 4.0 2.2 141 chr3R 16048842 intron ird5 - chr3R 16048912 intron ird5 - chr3R 16048983 intron ird5 - chr3R_11_16045001 chr3R_16045001 RAL-492 2083 chr3R 16189393 16189433 chr3R 16189816 16189856 invader4 11 423 4.5 3.0 3.8 2.3 463 chr3R 16189393 intron sra + chr3R 16189624 intron sra + chr3R 16189856 intron sra + chr3R_11_16185001 chr3R_16185001 RAL-492 2084 chr3R 16195540 16195582 chr3R 16195777 16195811 12 237 2.5 1.0 1.8 4.3 271 chr3R 16195540 intron sra + chr3R 16195676 intron sra + chr3R 16195811 intron sra + chr3R_12_16195001 chr3R_16195001 RAL-492 2085 chr3R 16246522 16246552 chr3R 16246614 16246635 8 93 0.0 5.5 2.8 2.1 113 chr3R 16246522 intron tara + chr3R 16246578 intron tara + chr3R 16246635 intron tara + chr3R_8_16245001 chr3R_16245001 RAL-492 2086 chr3R 16333742 16334010 chr3R 16333850 16334112 23 103 5.0 7.0 6.0 3.3 370 chr3R 16333742 intron Sulf1 - chr3R 16333927 intron Sulf1 - chr3R 16334112 intron Sulf1 - chr3R_23_16330001 chr3R_16330001 RAL-492 2087 chr3R 16374313 16374326 chr3R 16374423 16374463 7 132 1.5 1.5 1.5 2.8 150 chr3R 16374313 intergenic ss - chr3R 16374388 intergenic ss - chr3R 16374463 3` UTR ss - chr3R_7_16370001 chr3R_16370001 RAL-492 2088 chr3R 16704569 16704614 chr3R 16704664 16704713 9 95 5.5 3.0 4.2 1.7 144 chr3R 16704569 intron Ubx - chr3R 16704641 intron Ubx - chr3R 16704713 intron Ubx - chr3R_9_16700001 chr3R_16700001 RAL-492 2089 chr3R 16708677 16708716 chr3R 16708778 16708817 6 101 2.5 2.5 2.5 1.7 140 chr3R 16708677 intron Ubx - chr3R 16708747 intron Ubx - chr3R 16708817 intron Ubx - chr3R_6_16705001 chr3R_16705001 RAL-492 2090 chr3R 16732140 16732167 chr3R 16732256 16732283 5 114 0.5 2.5 1.5 2.0 143 chr3R 16732140 intron Ubx - chr3R 16732212 intron Ubx - chr3R 16732283 intron Ubx - chr3R_5_16730001 chr3R_16730001 RAL-492 2091 chr3R 16756300 16756352 chr3R 16762510 16762545 diver 14 6199 3.5 1.5 2.5 4.0 6245 chr3R 16756300 intron bxd - chr3R 16759422 intron bxd - chr3R 16762545 intron bxd - chr3R_14_16755001 chr3R_16755001 RAL-492 2092 chr3R 16812983 16812989 chr3R 16819955 16819959 5 6952 18.0 16.5 17.2 0.3 6976 chr3R 16812983 intron abd-A - chr3R 16816471 intron abd-A - chr3R 16819959 intron abd-A - chr3R_5_16815001 chr3R_16815001 RAL-492 2093 chr3R 16849713 16849743 chr3R 16849836 16849847 6 119 6.5 7.5 7.0 0.8 134 chr3R 16849713 intron iab-8 - chr3R 16849780 intron iab-8 - chr3R 16849847 intron iab-8 - chr3R_6_16845001 chr3R_16845001 RAL-492 2094 chr3R 16860326 16860355 chr3R 16860423 16860453 5 96 2.5 0.0 1.2 2.3 127 chr3R 16860326 intron iab-8 - chr3R 16860390 intron iab-8 - chr3R 16860453 intron iab-8 - chr3R_5_16860001 chr3R_16860001 RAL-492 2095 chr3R 16885463 16885515 chr3R 16885626 16885669 16 160 6.0 3.0 4.5 2.9 206 chr3R 16885463 intron iab-8 - chr3R 16885566 intron iab-8 - chr3R 16885669 intron iab-8 - chr3R_16_16885001 chr3R_16885001 RAL-492 2096 chr3R 17012939 17012983 chr3R 17013035 17013076 18 94 5.0 7.5 6.2 2.5 137 chr3R 17012939 intergenic CG8907 + chr3R 17013008 intergenic CG8907 + chr3R 17013076 intergenic not near genes chr3R_18_17010001 chr3R_17010001 RAL-492 2097 chr3R 17067493 17067533 chr3R 17067588 17067636 13 102 5.5 2.5 4.0 2.6 143 chr3R 17067493 intron Dad + chr3R 17067564 intron Dad + chr3R 17067636 intron Dad + chr3R_13_17065001 chr3R_17065001 RAL-492 2098 chr3R 17101124 17101130 chr3R 17101224 17101230 4 100 3.0 0.0 1.5 1.6 106 chr3R 17101124 intron cher - chr3R 17101177 intron cher - chr3R 17101230 intron cher - chr3R_4_17100001 chr3R_17100001 RAL-492 2099 chr3R 17121507 17121553 chr3R 17121721 17121768 13 214 2.0 1.0 1.5 5.2 261 chr3R 17121507 intron cher - chr3R 17121638 intron,exon cher -,CG42779 + chr3R 17121768 intron,exon cher -,CG42779 + chr3R_13_17120001 chr3R_17120001 RAL-492 2100 chr3R 17212965 17213000 chr3R 17213098 17213132 4 132 2.0 4.0 3.0 1.0 167 chr3R 17212965 intergenic not near genes chr3R 17213048 intergenic not near genes chr3R 17213132 intergenic not near genes chr3R_4_17210001 chr3R_17210001 RAL-492 2101 chr3R 17294653 17294694 chr3R 17295097 17295142 BS 8 446 2.5 4.5 3.5 1.8 489 chr3R 17294653 intergenic not near genes chr3R 17294898 intergenic not near genes chr3R 17295142 intergenic not near genes chr3R_8_17290001 chr3R_17290001 RAL-492 2102 chr3R 17393090 17393132 chr3R 17393224 17393266 6 131 3.0 5.0 4.0 1.2 176 chr3R 17393090 intergenic sds22 +,CREG - chr3R 17393178 intergenic CREG -,sds22 + chr3R 17393266 intergenic CREG -,sds22 + chr3R_6_17390001 chr3R_17390001 RAL-492 2103 chr3R 17461195 17461225 chr3R 17461297 17461327 7 102 2.0 6.5 4.2 1.3 132 chr3R 17461195 intergenic not near genes chr3R 17461261 intergenic not near genes chr3R 17461327 intergenic not near genes chr3R_7_17460001 chr3R_17460001 RAL-492 2104 chr3R 17497946 17497992 chr3R 17498051 17498098 8 106 3.0 1.0 2.0 2.7 152 chr3R 17497946 intron Dscam3 - chr3R 17498022 intron Dscam3 - chr3R 17498098 intron Dscam3 - chr3R_8_17495001 chr3R_17495001 RAL-492 2105 chr3R 17498849 17498862 chr3R 17499011 17499023 9 162 6.0 6.5 6.2 1.2 174 chr3R 17498849 intron Dscam3 - chr3R 17498936 intron Dscam3 - chr3R 17499023 intron Dscam3 - chr3R_9_17495001 chr3R_17495001 RAL-492 2106 chr3R 17498867 17498876 chr3R 17499007 17499038 8 159 3.5 5.0 4.2 1.5 171 chr3R 17498867 intron Dscam3 - chr3R 17498952 intron Dscam3 - chr3R 17499038 intron Dscam3 - chr3R_8_17495001 chr3R_17495001 RAL-492 2107 chr3R 17521581 17521590 chr3R 17521717 17521745 5 159 0.5 4.0 2.2 1.6 164 chr3R 17521581 intergenic not near genes chr3R 17521663 intergenic not near genes chr3R 17521745 intergenic not near genes chr3R_5_17520001 chr3R_17520001 RAL-492 2108 chr3R 17531557 17531593 chr3R 17531656 17531698 10 102 5.0 2.5 3.8 2.1 141 chr3R 17531557 intergenic not near genes chr3R 17531628 intergenic not near genes chr3R 17531698 intergenic not near genes chr3R_10_17530001 chr3R_17530001 RAL-492 2109 chr3R 17546063 17546104 chr3R 17546167 17546178 10 94 4.5 4.0 4.2 1.9 115 chr3R 17546063 intron Prx3 - chr3R 17546120 intron Prx3 - chr3R 17546178 intron Prx3 - chr3R_10_17545001 chr3R_17545001 RAL-492 2110 chr3R 17587191 17587237 chr3R 17587394 17587420 10 195 5.0 6.0 5.5 1.5 229 chr3R 17587191 intergenic not near genes chr3R 17587306 intergenic not near genes chr3R 17587420 intergenic not near genes chr3R_10_17585001 chr3R_17585001 RAL-492 2111 chr3R 17647238 17647268 chr3R 17647355 17647385 6 116 2.5 4.5 3.5 1.3 147 chr3R 17647238 intergenic CG14322 + chr3R 17647312 intergenic CG14322 + chr3R 17647385 intergenic CG14322 + chr3R_6_17645001 chr3R_17645001 RAL-492 2112 chr3R 17729710 17729740 chr3R 17729807 17729809 8 92 7.0 5.5 6.2 1.1 99 chr3R 17729710 intron Lgr1 + chr3R 17729760 intron Lgr1 + chr3R 17729809 intron Lgr1 + chr3R_8_17725001 chr3R_17725001 RAL-492 2113 chr3R 17734826 17734851 chr3R 17734960 17734985 4 134 4.0 1.0 2.5 1.1 159 chr3R 17734826 intergenic CG14321 + chr3R 17734906 intergenic not near genes chr3R 17734985 intergenic not near genes chr3R_4_17730001 chr3R_17730001 RAL-492 2114 chr3R 17773357 17773390 chr3R 17773472 17773505 11 113 4.0 6.5 5.2 1.8 148 chr3R 17773357 exon CG43102 - chr3R 17773431 intron CG43102 - chr3R 17773505 exon CG43102 - chr3R_11_17770001 chr3R_17770001 RAL-492 2115 chr3R 17823190 17823222 chr3R 17823287 17823319 9 93 2.0 5.5 3.8 1.9 129 chr3R 17823190 intron tinc + chr3R 17823254 intron tinc + chr3R 17823319 intron tinc + chr3R_9_17820001 chr3R_17820001 RAL-492 2116 chr3R 17919584 17919607 chr3R 17919660 17919701 7 92 5.5 8.5 7.0 0.9 117 chr3R 17919584 intergenic cpo + chr3R 17919642 intergenic cpo + chr3R 17919701 intergenic cpo + chr3R_7_17915001 chr3R_17915001 RAL-492 2117 chr3R 17925837 17925887 chr3R 17927324 17927350 hobo 16 1482 2.5 7.0 4.8 2.8 1513 chr3R 17925837 intron cpo + chr3R 17926594 intron cpo + chr3R 17927350 intron cpo + chr3R_16_17925001 chr3R_17925001 RAL-492 2118 chr3R 17938446 17938497 chr3R 17938548 17938596 23 99 0.5 4.0 2.2 7.2 150 chr3R 17938446 intron cpo + chr3R 17938521 intron cpo + chr3R 17938596 intron cpo + chr3R_23_17935001 chr3R_17935001 RAL-492 2119 chr3R 17955877 17955884 chr3R 17955996 17956003 4 119 0.0 6.0 3.0 1.0 126 chr3R 17955877 intron cpo + chr3R 17955940 intron cpo + chr3R 17956003 intron cpo + chr3R_4_17955001 chr3R_17955001 RAL-492 2120 chr3R 18025320 18025360 chr3R 18025421 18025461 8 101 2.0 4.5 3.2 1.9 141 chr3R 18025320 3` UTR CG7794 + chr3R 18025390 intergenic CG7794 + chr3R 18025461 intergenic CG7794 + chr3R_8_18025001 chr3R_18025001 RAL-492 2121 chr3R 18032762 18032785 chr3R 18040455 18040477 opus 9 7693 7.5 3.0 5.2 1.5 7715 chr3R 18032762 intergenic not near genes chr3R 18036620 intergenic not near genes chr3R 18040477 intergenic not near genes chr3R_9_18035001 chr3R_18035001 RAL-492 2122 chr3R 18061568 18061609 chr3R 18063156 18063197 F-element 4 1588 3.5 4.0 3.8 0.8 1629 chr3R 18061568 intergenic not near genes chr3R 18062382 intergenic not near genes chr3R 18063197 intergenic not near genes chr3R_4_18060001 chr3R_18060001 RAL-492 2123 chr3R 18122875 18122912 chr3R 18122972 18123009 4 96 0.5 1.0 0.8 2.2 134 chr3R 18122875 intron sr + chr3R 18122942 intron sr + chr3R 18123009 intron sr + chr3R_4_18120001 chr3R_18120001 RAL-492 2124 chr3R 18338987 18339012 chr3R 18339111 18339137 5 123 0.0 2.0 1.0 2.5 150 chr3R 18338987 intron CG15803 - chr3R 18339062 intron CG15803 - chr3R 18339137 intron CG15803 - chr3R_5_18335001 chr3R_18335001 RAL-492 2125 chr3R 18341993 18342040 chr3R 18342089 18342096 14 88 6.0 2.0 4.0 2.8 103 chr3R 18341993 intron CG15803 - chr3R 18342044 intron CG15803 - chr3R 18342096 intron CG15803 - chr3R_14_18340001 chr3R_18340001 RAL-492 2126 chr3R 18501579 18501623 chr3R 18501680 18501723 15 101 2.5 6.5 4.5 2.7 144 chr3R 18501579 intron fru - chr3R 18501651 intron fru - chr3R 18501723 intron fru - chr3R_15_18500001 chr3R_18500001 RAL-492 2127 chr3R 18562551 18562589 chr3R 18562690 18562729 6 139 2.0 3.5 2.8 1.6 178 chr3R 18562551 intergenic not near genes chr3R 18562640 intergenic not near genes chr3R 18562729 intergenic not near genes chr3R_6_18560001 chr3R_18560001 RAL-492 2128 chr3R 18606484 18606522 chr3R 18610735 18610774 F-element 10 4251 6.0 4.0 5.0 1.7 4290 chr3R 18606484 intron,intron qin +,CG14304 - chr3R 18608629 intron,intron qin +,CG14304 - chr3R 18610774 intron,intron qin +,CG14304 - chr3R_10_18605001 chr3R_18605001 RAL-492 2129 chr3R 18615352 18615390 chr3R 18615464 18615502 7 111 0.5 2.5 1.5 2.8 150 chr3R 18615352 intron,intron qin +,CG14304 - chr3R 18615427 intron,intron qin +,CG14304 - chr3R 18615502 intron,intron qin +,CG14304 - chr3R_7_18615001 chr3R_18615001 RAL-492 2130 chr3R 18618248 18618296 chr3R 18618353 18618401 9 105 0.0 2.5 1.2 4.1 153 chr3R 18618248 intron,intron qin +,CG14304 - chr3R 18618324 intron,intron qin +,CG14304 - chr3R 18618401 intron,intron qin +,CG14304 - chr3R_9_18615001 chr3R_18615001 RAL-492 2131 chr3R 18628858 18629034 chr3R 18629002 18629144 6 116 0.0 0.0 0.0 6.0 286 chr3R 18628858 intron qin + chr3R 18629001 intron qin + chr3R 18629144 intron qin + chr3R_6_18625001 chr3R_18625001 RAL-492 2132 chr3R 18670366 18670381 chr3R 18670478 18670494 4 112 12.0 7.5 9.8 0.4 128 chr3R 18670366 intron CG7702 + chr3R 18670430 intron CG7702 + chr3R 18670494 intron CG7702 + chr3R_4_18670001 chr3R_18670001 RAL-492 2133 chr3R 18670386 18670410 chr3R 18670475 18670493 9 102 5.0 7.5 6.2 1.2 107 chr3R 18670386 intron CG7702 + chr3R 18670440 intron CG7702 + chr3R 18670493 intron CG7702 + chr3R_9_18670001 chr3R_18670001 RAL-492 2134 chr3R 18807314 18807323 chr3R 18807410 18807418 4 95 2.0 0.0 1.0 2.0 104 chr3R 18807314 intron CG18208 - chr3R 18807366 intron CG18208 - chr3R 18807418 intron CG18208 - chr3R_4_18805001 chr3R_18805001 RAL-492 2135 chr3R 18812063 18812108 chr3R 18812160 18812200 17 97 4.0 6.0 5.0 2.8 137 chr3R 18812063 intron CG18208 - chr3R 18812132 intron CG18208 - chr3R 18812200 intron CG18208 - chr3R_17_18810001 chr3R_18810001 RAL-492 2136 chr3R 18817487 18817539 chr3R 18817605 18817657 12 118 0.0 0.0 0.0 12.0 170 chr3R 18817487 intron CG18208 - chr3R 18817572 intron CG18208 - chr3R 18817657 intron CG18208 - chr3R_12_18815001 chr3R_18815001 RAL-492 2137 chr3R 18887585 18887598 chr3R 18887683 18887699 5 98 8.5 7.0 7.8 0.6 114 chr3R 18887585 intergenic not near genes chr3R 18887642 intergenic not near genes chr3R 18887699 intergenic not near genes chr3R_5_18885001 chr3R_18885001 RAL-492 2138 chr3R 18961970 18961997 chr3R 18962062 18962071 11 95 7.5 2.5 5.0 1.8 101 chr3R 18961970 intron,intron CG42613 +,CG43732 + chr3R 18962020 intron,intron CG42613 +,CG43732 + chr3R 18962071 intron,intron CG42613 +,CG43732 + chr3R_11_18960001 chr3R_18960001 RAL-492 2139 chr3R 19013001 19013052 chr3R 19013105 19013156 13 101 1.0 3.5 2.2 4.1 155 chr3R 19013001 intron gukh + chr3R 19013078 intron gukh + chr3R 19013156 intron gukh + chr3R_13_19010001 chr3R_19010001 RAL-492 2140 chr3R 19106803 19106831 chr3R 19106913 19106917 6 98 9.5 0.0 4.8 1.0 114 chr3R 19106803 intron CG6040 + chr3R 19106860 intron CG6040 + chr3R 19106917 intron CG6040 + chr3R_6_19105001 chr3R_19105001 RAL-492 2141 chr3R 19136406 19136408 chr3R 19139782 19139808 Bari1 6 3382 66.5 20.0 43.2 0.1 3402 chr3R 19136406 exon Cyp12a4 + chr3R 19138107 intergenic not near genes chr3R 19139808 3` UTR Ppcs - chr3R_6_19135001 chr3R_19135001 RAL-492 2142 chr3R 19140259 19140295 chr3R 19140711 19140763 13 460 1.5 0.5 1.0 6.5 504 chr3R 19140259 3` UTR Ppcs - chr3R 19140511 3` UTR Ppcs - chr3R 19140763 3` UTR Ppcs - chr3R_13_19140001 chr3R_19140001 RAL-492 2143 chr3R 19150198 19150240 chr3R 19150301 19150343 17 102 4.5 1.0 2.8 4.5 145 chr3R 19150198 intron CG5835 - chr3R 19150270 intron CG5835 - chr3R 19150343 intron CG5835 - chr3R_17_19150001 chr3R_19150001 RAL-492 2144 chr3R 19276911 19276938 chr3R 19277011 19277038 9 100 3.5 0.5 2.0 3.0 127 chr3R 19276911 intergenic not near genes chr3R 19276974 intergenic not near genes chr3R 19277038 intergenic not near genes chr3R_9_19275001 chr3R_19275001 RAL-492 2145 chr3R 19348629 19348675 chr3R 19348728 19348774 10 99 1.0 1.0 1.0 5.0 145 chr3R 19348629 intergenic not near genes chr3R 19348702 intergenic not near genes chr3R 19348774 intergenic not near genes chr3R_10_19345001 chr3R_19345001 RAL-492 2146 chr3R 19561805 19561827 chr3R 19561902 19561924 4 96 11.0 4.5 7.8 0.5 119 chr3R 19561805 intron Dys + chr3R 19561864 intron Dys + chr3R 19561924 intron Dys + chr3R_4_19560001 chr3R_19560001 RAL-492 2147 chr3R 19561828 19561849 chr3R 19561901 19561926 6 78 7.0 4.0 5.5 0.9 98 chr3R 19561828 intron Dys + chr3R 19561877 intron Dys + chr3R 19561926 intron Dys + chr3R_6_19560001 chr3R_19560001 RAL-492 2148 chr3R 19581634 19581645 chr3R 19581734 19581745 4 98 8.0 0.0 4.0 0.8 111 chr3R 19581634 intron Dys + chr3R 19581690 intron Dys + chr3R 19581745 intron Dys + chr3R_4_19580001 chr3R_19580001 RAL-492 2149 chr3R 19587454 19587497 chr3R 19587551 19587582 6 94 2.0 1.0 1.5 2.4 128 chr3R 19587454 intron Dys + chr3R 19587518 intron Dys + chr3R 19587582 intron Dys + chr3R_6_19585001 chr3R_19585001 RAL-492 2150 chr3R 19593485 19593516 chr3R 19593589 19593613 10 102 7.5 6.5 7.0 1.2 128 chr3R 19593485 intron Dys + chr3R 19593549 intron Dys + chr3R 19593613 intron Dys + chr3R_10_19590001 chr3R_19590001 RAL-492 2151 chr3R 19633276 19633312 chr3R 19633381 19633418 4 104 0.0 0.5 0.2 3.3 142 chr3R 19633276 intergenic subdued - chr3R 19633347 intergenic subdued - chr3R 19633418 3` UTR subdued - chr3R_4_19630001 chr3R_19630001 RAL-492 2152 chr3R 19846947 19846968 chr3R 19847127 19847148 4 177 4.5 2.5 3.5 0.9 201 chr3R 19846947 intergenic CG4662 + chr3R 19847048 intergenic CG4662 + chr3R 19847148 intergenic CG4662 + chr3R_4_19845001 chr3R_19845001 RAL-492 2153 chr3R 19945952 19945998 chr3R 19946075 19946121 15 115 6.0 5.0 5.5 2.3 169 chr3R 19945952 intron Hs6st - chr3R 19946036 intron Hs6st - chr3R 19946121 intron Hs6st - chr3R_15_19945001 chr3R_19945001 RAL-492 2154 chr3R 19955327 19955380 chr3R 19955448 19955499 8 120 2.5 3.0 2.8 2.1 172 chr3R 19955327 intron Hs6st - chr3R 19955413 intron Hs6st - chr3R 19955499 intron Hs6st - chr3R_8_19955001 chr3R_19955001 RAL-492 2155 chr3R 20008804 20008848 chr3R 20008905 20008949 9 100 2.0 4.5 3.2 2.1 145 chr3R 20008804 intergenic MED25 +,Hs6st - chr3R 20008876 intergenic MED25 +,Hs6st - chr3R 20008949 5` UTR MED25 + chr3R_9_20005001 chr3R_20005001 RAL-492 2156 chr3R 20015803 20015820 chr3R 20015928 20015928 4 117 5.5 2.0 3.8 0.8 125 chr3R 20015803 exon CG4836 + chr3R 20015866 exon CG4836 + chr3R 20015928 exon CG4836 + chr3R_4_20015001 chr3R_20015001 RAL-492 2157 chr3R 20020144 20020178 chr3R 20020304 20020315 6 156 2.5 4.5 3.5 1.3 171 chr3R 20020144 intron CG4433 - chr3R 20020230 intron CG4433 - chr3R 20020315 intron CG4433 - chr3R_6_20020001 chr3R_20020001 RAL-492 2158 chr3R 20097513 20097563 chr3R 20097920 20097970 9 407 4.0 1.0 2.5 2.6 457 chr3R 20097513 intergenic not near genes chr3R 20097742 intergenic not near genes chr3R 20097970 intergenic not near genes chr3R_9_20095001 chr3R_20095001 RAL-492 2159 chr3R 20109522 20109562 chr3R 20114746 20114788 copia 10 5223 3.0 6.0 4.5 1.8 5266 chr3R 20109522 intergenic not near genes chr3R 20112155 intergenic not near genes chr3R 20114788 intergenic CG10887 + chr3R_10_20110001 chr3R_20110001 RAL-492 2160 chr3R 20156677 20156718 chr3R 20165867 20165908 roo 10 9186 5.0 3.0 4.0 2.0 9231 chr3R 20156677 intergenic not near genes chr3R 20161292 intergenic not near genes chr3R 20165908 intergenic not near genes chr3R_10_20160001 chr3R_20160001 RAL-492 2161 chr3R 20205546 20205595 chr3R 20205687 20205737 12 142 4.0 2.0 3.0 3.0 191 chr3R 20205546 intron Nlg4 + chr3R 20205642 intron Nlg4 + chr3R 20205737 intron Nlg4 + chr3R_12_20205001 chr3R_20205001 RAL-492 2162 chr3R 20245275 20245304 chr3R 20248905 20248934 F-element 4 3630 2.5 0.5 1.5 1.6 3659 chr3R 20245275 3` UTR Nlg4 + chr3R 20247104 intergenic not near genes chr3R 20248934 intergenic not near genes chr3R_4_20245001 chr3R_20245001 RAL-492 2163 chr3R 20252223 20252246 chr3R 20252321 20252344 4 97 0.0 0.0 0.0 4.0 121 chr3R 20252223 intergenic not near genes chr3R 20252284 intergenic cic + chr3R 20252344 intergenic cic + chr3R_4_20250001 chr3R_20250001 RAL-492 2164 chr3R 20256850 20256871 chr3R 20256943 20256969 5 95 0.5 8.0 4.2 1.0 119 chr3R 20256850 intron cic + chr3R 20256910 intron cic + chr3R 20256969 intron cic + chr3R_5_20255001 chr3R_20255001 RAL-492 2165 chr3R 20266500 20266546 chr3R 20272991 20273037 Burdock 11 6488 2.5 2.5 2.5 3.1 6537 chr3R 20266500 intron cic + chr3R 20269768 intron cic + chr3R 20273037 intron cic + chr3R_11_20265001 chr3R_20265001 RAL-492 2166 chr3R 20282263 20282306 chr3R 20282358 20282402 4 96 0.0 1.5 0.8 2.2 139 chr3R 20282263 intron cic + chr3R 20282332 intron cic + chr3R 20282402 intron cic + chr3R_4_20280001 chr3R_20280001 RAL-492 2167 chr3R 20330982 20331019 chr3R 20331487 20331525 roo 8 506 3.5 3.5 3.5 1.8 543 chr3R 20330982 intergenic Sirt2 + chr3R 20331254 intergenic Sirt2 + chr3R 20331525 intergenic not near genes chr3R_8_20330001 chr3R_20330001 RAL-492 2168 chr3R 20434827 20434836 chr3R 20435032 20435041 4 204 9.0 1.5 5.2 0.6 214 chr3R 20434827 intron Gfrl - chr3R 20434934 intron Gfrl - chr3R 20435041 intron Gfrl - chr3R_4_20430001 chr3R_20430001 RAL-492 2169 chr3R 20457993 20458015 chr3R 20458102 20458124 7 107 8.0 2.5 5.2 1.1 131 chr3R 20457993 intron Gfrl - chr3R 20458058 intron Gfrl - chr3R 20458124 intron Gfrl - chr3R_7_20455001 chr3R_20455001 RAL-492 2170 chr3R 20458016 20458043 chr3R 20458100 20458115 10 97 3.5 2.5 3.0 2.5 99 chr3R 20458016 intron Gfrl - chr3R 20458066 intron Gfrl - chr3R 20458115 intron Gfrl - chr3R_10_20455001 chr3R_20455001 RAL-492 2171 chr3R 20467078 20467089 chr3R 20467156 20467168 4 87 4.5 2.0 3.2 1.0 90 chr3R 20467078 intron Gfrl - chr3R 20467123 intron Gfrl - chr3R 20467168 intron Gfrl - chr3R_4_20465001 chr3R_20465001 RAL-492 2172 chr3R 20467099 20467114 chr3R 20467153 20467174 5 69 2.5 1.5 2.0 1.7 75 chr3R 20467099 intron Gfrl - chr3R 20467136 intron Gfrl - chr3R 20467174 intron Gfrl - chr3R_5_20465001 chr3R_20465001 RAL-492 2173 chr3R 20469287 20469443 chr3R 20469400 20469545 6 112 0.0 0.0 0.0 6.0 258 chr3R 20469287 intron Gfrl - chr3R 20469416 intron Gfrl - chr3R 20469545 intron Gfrl - chr3R_6_20465001 chr3R_20465001 RAL-492 2174 chr3R 20473965 20473987 chr3R 20474042 20474055 8 78 3.5 2.0 2.8 2.1 90 chr3R 20473965 intron Gfrl - chr3R 20474010 intron Gfrl - chr3R 20474055 intron Gfrl - chr3R_8_20470001 chr3R_20470001 RAL-492 2175 chr3R 20506587 20506609 chr3R 20507409 20507432 BS 7 821 5.0 9.5 7.2 0.9 845 chr3R 20506587 intergenic Or92a + chr3R 20507010 intergenic CG4288 - chr3R 20507432 3` UTR CG4288 - chr3R_7_20505001 chr3R_20505001 RAL-492 2176 chr3R 20512989 20513000 chr3R 20515717 20515732 opus 4 2731 1.5 0.0 0.8 2.2 2743 chr3R 20512989 intergenic not near genes chr3R 20514360 intergenic not near genes chr3R 20515732 intergenic not near genes chr3R_4_20510001 chr3R_20510001 RAL-492 2177 chr3R 20594465 20594513 chr3R 20594574 20594622 8 107 1.5 0.5 1.0 4.0 157 chr3R 20594465 intron bon + chr3R 20594544 intron bon + chr3R 20594622 intron bon + chr3R_8_20590001 chr3R_20590001 RAL-492 2178 chr3R 20596171 20596212 chr3R 20596278 20596308 11 104 3.0 3.0 3.0 2.8 137 chr3R 20596171 intron bon + chr3R 20596240 intron bon + chr3R 20596308 intron bon + chr3R_11_20595001 chr3R_20595001 RAL-492 2179 chr3R 20601598 20601614 chr3R 20601705 20601718 4 116 10.5 2.5 6.5 0.5 120 chr3R 20601598 intron bon + chr3R 20601658 intron bon + chr3R 20601718 intron bon + chr3R_4_20600001 chr3R_20600001 RAL-492 2180 chr3R 20684203 20684245 chr3R 20684307 20684349 4 104 2.5 3.5 3.0 1.0 146 chr3R 20684203 intergenic not near genes chr3R 20684276 intergenic not near genes chr3R 20684349 intergenic not near genes chr3R_4_20680001 chr3R_20680001 RAL-492 2181 chr3R 20703480 20703515 chr3R 20703894 20703928 9 413 2.0 6.5 4.2 1.7 448 chr3R 20703480 intron Oamb - chr3R 20703704 intron Oamb - chr3R 20703928 intron Oamb - chr3R_9_20700001 chr3R_20700001 RAL-492 2182 chr3R 20722840 20722880 chr3R 20722979 20722986 9 135 2.5 2.5 2.5 2.6 146 chr3R 20722840 intergenic not near genes chr3R 20722913 intergenic not near genes chr3R 20722986 intergenic not near genes chr3R_9_20720001 chr3R_20720001 RAL-492 2183 chr3R 20730924 20730948 chr3R 20731034 20731059 7 110 2.0 0.0 1.0 3.5 135 chr3R 20730924 intergenic not near genes chr3R 20730992 intergenic not near genes chr3R 20731059 intergenic not near genes chr3R_7_20730001 chr3R_20730001 RAL-492 2184 chr3R 20733766 20733781 chr3R 20733865 20733870 4 100 13.0 9.5 11.2 0.3 104 chr3R 20733766 intergenic not near genes chr3R 20733818 intergenic not near genes chr3R 20733870 intergenic not near genes chr3R_4_20730001 chr3R_20730001 RAL-492 2185 chr3R 20787424 20787453 chr3R 20787535 20787564 7 110 4.0 1.0 2.5 2.0 140 chr3R 20787424 intron Syp + chr3R 20787494 intron Syp + chr3R 20787564 intron Syp + chr3R_7_20785001 chr3R_20785001 RAL-492 2186 chr3R 20878241 20878267 chr3R 20878478 20878504 5 236 5.0 0.0 2.5 1.4 263 chr3R 20878241 exon TotZ + chr3R 20878372 intergenic TotZ +,CR44048 - chr3R 20878504 3` UTR CR44048 - chr3R_5_20875001 chr3R_20875001 RAL-492 2187 chr3R 20942791 20942842 chr3R 20942887 20942912 9 89 3.0 2.5 2.8 2.4 121 chr3R 20942791 intron CG31191 - chr3R 20942852 intron CG31191 - chr3R 20942912 intron CG31191 - chr3R_9_20940001 chr3R_20940001 RAL-492 2188 chr3R 20982299 20982322 chr3R 20982536 20982590 13 260 6.5 2.5 4.5 2.4 291 chr3R 20982299 intron Calx + chr3R 20982444 intron Calx + chr3R 20982590 intron Calx + chr3R_13_20980001 chr3R_20980001 RAL-492 2189 chr3R 21020387 21020433 chr3R 21020483 21020529 9 91 3.5 4.5 4.0 1.8 142 chr3R 21020387 3` UTR Rlip + chr3R 21020458 3` UTR Rlip + chr3R 21020529 3` UTR Rlip + chr3R_9_21020001 chr3R_21020001 RAL-492 2190 chr3R 21021819 21021856 chr3R 21022161 21022196 7 340 4.5 2.0 3.2 1.7 377 chr3R 21021819 intron CG17278 - chr3R 21022008 intron CG17278 - chr3R 21022196 intron CG17278 - chr3R_7_21020001 chr3R_21020001 RAL-492 2191 chr3R 21041087 21041096 chr3R 21041260 21041269 5 172 9.0 4.5 6.8 0.6 182 chr3R 21041087 exon Dhc93AB - chr3R 21041178 intron Dhc93AB - chr3R 21041269 intron Dhc93AB - chr3R_5_21040001 chr3R_21040001 RAL-492 2192 chr3R 21041101 21041130 chr3R 21041257 21041280 11 168 4.0 3.5 3.8 2.3 179 chr3R 21041101 exon Dhc93AB - chr3R 21041190 intron Dhc93AB - chr3R 21041280 intron Dhc93AB - chr3R_11_21040001 chr3R_21040001 RAL-492 2193 chr3R 21074808 21074821 chr3R 21075049 21075062 4 239 0.5 7.0 3.8 0.8 254 chr3R 21074808 intron dmrt93B + chr3R 21074935 intron dmrt93B + chr3R 21075062 intron dmrt93B + chr3R_4_21070001 chr3R_21070001 RAL-492 2194 chr3R 21108020 21108059 chr3R 21108301 21108340 7 281 1.5 1.5 1.5 2.8 320 chr3R 21108020 intergenic Sec15 -,rtet + chr3R 21108180 intergenic Sec15 -,rtet + chr3R 21108340 intergenic rtet +,Sec15 - chr3R_7_21105001 chr3R_21105001 RAL-492 2195 chr3R 21132613 21132644 chr3R 21132716 21132748 4 104 3.0 0.0 1.5 1.6 135 chr3R 21132613 3` UTR Ice2 + chr3R 21132680 3` UTR Ice2 + chr3R 21132748 3` UTR CG7009 - chr3R_4_21130001 chr3R_21130001 RAL-492 2196 chr3R 21141666 21141673 chr3R 21150157 21150170 Tirant 4 8496 10.5 3.0 6.8 0.5 8504 chr3R 21141666 intron SNF4Agamma + chr3R 21145918 intron SNF4Agamma + chr3R 21150170 intron SNF4Agamma + chr3R_4_21145001 chr3R_21145001 RAL-492 2197 chr3R 21141675 21141700 chr3R 21150154 21150157 Tirant 11 8483 5.5 2.5 4.0 2.2 8482 chr3R 21141675 intron SNF4Agamma + chr3R 21145916 intron SNF4Agamma + chr3R 21150157 intron SNF4Agamma + chr3R_11_21145001 chr3R_21145001 RAL-492 2198 chr3R 21150790 21150834 chr3R 21150945 21150989 8 153 2.0 4.5 3.2 1.9 199 chr3R 21150790 intron SNF4Agamma + chr3R 21150890 intron SNF4Agamma + chr3R 21150989 intron SNF4Agamma + chr3R_8_21150001 chr3R_21150001 RAL-492 2199 chr3R 21154568 21154585 chr3R 21154800 21154820 6 234 8.0 9.5 8.8 0.6 252 chr3R 21154568 intron SNF4Agamma + chr3R 21154694 intron SNF4Agamma + chr3R 21154820 intron SNF4Agamma + chr3R_6_21150001 chr3R_21150001 RAL-492 2200 chr3R 21163248 21163265 chr3R 21163345 21163362 7 97 4.0 7.0 5.5 1.1 114 chr3R 21163248 intron SNF4Agamma + chr3R 21163305 intron SNF4Agamma + chr3R 21163362 intron SNF4Agamma + chr3R_7_21160001 chr3R_21160001 RAL-492 2201 chr3R 21165100 21165117 chr3R 21165202 21165220 6 103 1.5 5.5 3.5 1.3 120 chr3R 21165100 intron,3` UTR SNF4Agamma +,CG5810 + chr3R 21165160 intron,3` UTR SNF4Agamma +,CG5810 + chr3R 21165220 intron,3` UTR SNF4Agamma +,Snmp1 - chr3R_6_21165001 chr3R_21165001 RAL-492 2202 chr3R 21383272 21383279 chr3R 21383370 21383376 4 97 0.0 0.5 0.2 3.3 104 chr3R 21383272 intergenic not near genes chr3R 21383324 intergenic not near genes chr3R 21383376 intergenic not near genes chr3R_4_21380001 chr3R_21380001 RAL-492 2203 chr3R 21385679 21385710 chr3R 21385776 21385811 9 94 3.0 0.0 1.5 3.6 132 chr3R 21385679 intergenic not near genes chr3R 21385745 intergenic not near genes chr3R 21385811 intergenic not near genes chr3R_9_21385001 chr3R_21385001 RAL-492 2204 chr3R 21464382 21464424 chr3R 21464488 21464528 5 106 0.5 0.5 0.5 3.3 146 chr3R 21464382 intergenic not near genes chr3R 21464455 intergenic not near genes chr3R 21464528 intergenic not near genes chr3R_5_21460001 chr3R_21460001 RAL-492 2205 chr3R 21471999 21472034 chr3R 21472098 21472135 12 97 7.5 4.5 6.0 1.7 136 chr3R 21471999 intergenic not near genes chr3R 21472067 intergenic not near genes chr3R 21472135 intergenic not near genes chr3R_12_21470001 chr3R_21470001 RAL-492 2206 chr3R 21506853 21506873 chr3R 21506959 21506979 4 105 3.0 1.5 2.2 1.2 126 chr3R 21506853 intron C15 + chr3R 21506916 intron C15 + chr3R 21506979 intron C15 + chr3R_4_21505001 chr3R_21505001 RAL-492 2207 chr3R 21519977 21520131 chr3R 21520098 21520245 13 118 0.0 0.0 0.0 13.0 268 chr3R 21519977 intergenic not near genes chr3R 21520111 intergenic not near genes chr3R 21520245 intergenic not near genes chr3R_13_21520001 chr3R_21520001 RAL-492 2208 chr3R 21662169 21662213 chr3R 21662316 21662364 22 151 5.5 2.5 4.0 4.4 195 chr3R 21662169 exon CG6353 - chr3R 21662266 intron CG6353 - chr3R 21662364 intron CG6353 - chr3R_22_21660001 chr3R_21660001 RAL-492 2209 chr3R 21725671 21725685 chr3R 21725827 21725841 6 156 0.0 5.5 2.8 1.6 170 chr3R 21725671 intergenic not near genes chr3R 21725756 intergenic not near genes chr3R 21725841 intergenic not near genes chr3R_6_21725001 chr3R_21725001 RAL-492 2210 chr3R 21731822 21731833 chr3R 21731949 21731960 5 126 3.5 9.0 6.2 0.7 138 chr3R 21731822 intergenic not near genes chr3R 21731891 intergenic not near genes chr3R 21731960 intergenic not near genes chr3R_5_21730001 chr3R_21730001 RAL-492 2211 chr3R 21761123 21761155 chr3R 21768509 21768534 mdg1 6 7381 9.5 6.5 8.0 0.7 7411 chr3R 21761123 exon CG42335 + chr3R 21764828 intron CG42335 + chr3R 21768534 exon CG42335 + chr3R_6_21760001 chr3R_21760001 RAL-492 2212 chr3R 21800471 21800516 chr3R 21800576 21800615 18 105 2.5 6.0 4.2 3.5 144 chr3R 21800471 intron CASK - chr3R 21800543 intron CASK - chr3R 21800615 intron CASK - chr3R_18_21800001 chr3R_21800001 RAL-492 2213 chr3R 21815242 21815284 chr3R 21815465 21815497 18 223 7.0 6.0 6.5 2.4 255 chr3R 21815242 intron CASK - chr3R 21815370 intron CASK - chr3R 21815497 intron CASK - chr3R_18_21815001 chr3R_21815001 RAL-492 2214 chr3R 17389054 17389054 chr3R 21907534 21907534 15 4518480 9.0 20.5 14.8 0.9 4518480 chr3R 17389054 intron,3` UTR Brf -,lute + chr3R 19648294 5` UTR CG6195 - chr3R 21907534 intergenic CG6678 + chr3R_15_19645001 chr3R_19645001 RAL-492 2215 chr3R 19457913 19457919 chr3R 21907534 21907534 4 2449618 8.0 20.5 14.2 0.3 2449621 chr3R 19457913 3` UTR CG31221 + chr3R 20682724 intergenic not near genes chr3R 21907534 intergenic CG6678 + chr3R_4_20680001 chr3R_20680001 RAL-492 2216 chr3R 21337429 21337429 chr3R 21907534 21907534 9 570105 10.0 20.5 15.2 0.6 570105 chr3R 21337429 intron CG16791 - chr3R 21622482 intron E2f - chr3R 21907534 intergenic CG6678 + chr3R_9_21620001 chr3R_21620001 RAL-492 2217 chr3R 21907534 21907534 chr3R 28831799 28831803 33 6924268 23.5 19.0 21.2 1.5 6924269 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831803 intron WASp - chr3R_33_25365001 chr3R_25365001 RAL-492 2218 chr3R 21907534 21907534 chr3R 29013339 29013340 5 7105806 23.5 31.5 27.5 0.2 7105806 chr3R 21907534 intergenic CG6678 + chr3R 25460437 intron Fur1 - chr3R 29013340 intron wat - chr3R_5_25460001 chr3R_25460001 RAL-492 2219 chr3R 17389054 17389054 chr3R 21907535 21907535 10 4518481 9.0 21.0 15.0 0.6 4518481 chr3R 17389054 intron,3` UTR Brf -,lute + chr3R 19648294 5` UTR CG6195 - chr3R 21907535 intergenic CG6678 + chr3R_10_19645001 chr3R_19645001 RAL-492 2220 chr3R 19457913 19457918 chr3R 21907535 21907535 5 2449620 8.5 21.0 14.8 0.3 2449622 chr3R 19457913 3` UTR CG31221 + chr3R 20682724 intergenic not near genes chr3R 21907535 intergenic CG6678 + chr3R_5_20680001 chr3R_20680001 RAL-492 2221 chr3R 20177845 20177845 chr3R 21907535 21907535 8 1729690 7.0 21.0 14.0 0.5 1729690 chr3R 20177845 intergenic not near genes chr3R 21042690 intergenic Dhc93AB - chr3R 21907535 intergenic CG6678 + chr3R_8_21040001 chr3R_21040001 RAL-492 2222 chr3R 21337429 21337429 chr3R 21907535 21907535 5 570106 10.0 21.0 15.5 0.3 570106 chr3R 21337429 intron CG16791 - chr3R 21622482 intron E2f - chr3R 21907535 intergenic CG6678 + chr3R_5_21620001 chr3R_21620001 RAL-492 2223 chr3R 21907535 21907535 chr3R 26659332 26659337 4 4751799 23.5 20.5 22.0 0.2 4751802 chr3R 21907535 intergenic CG6678 + chr3R 24283436 intergenic CR45662 - chr3R 26659337 intron beat-VII - chr3R_4_24280001 chr3R_24280001 RAL-492 2224 chr3R 21907535 21907535 chr3R 28831801 28831802 37 6924267 23.5 19.0 21.2 1.7 6924267 chr3R 21907535 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_37_25365001 chr3R_25365001 RAL-492 2225 chr3R 21907535 21907535 chr3R 29013339 29013340 9 7105805 23.5 31.5 27.5 0.3 7105805 chr3R 21907535 intergenic CG6678 + chr3R 25460438 intron Fur1 - chr3R 29013340 intron wat - chr3R_9_25460001 chr3R_25460001 RAL-492 2226 chr3R 17122371 17122555 chr3R 21907536 21907536 5 4785128 17.5 21.5 19.5 0.2 4785165 chr3R 17122371 intron cher - chr3R 19514954 intron Dys + chr3R 21907536 intergenic CG6678 + chr3R_5_19510001 chr3R_19510001 RAL-492 2227 chr3R 17389054 17389054 chr3R 21907536 21907536 6 4518482 9.0 21.5 15.2 0.4 4518482 chr3R 17389054 intron,3` UTR Brf -,lute + chr3R 19648295 5` UTR CG6195 - chr3R 21907536 intergenic CG6678 + chr3R_6_19645001 chr3R_19645001 RAL-492 2228 chr3R 19457915 19457919 chr3R 21907536 21907536 10 2449620 8.0 21.5 14.8 0.6 2449621 chr3R 19457915 3` UTR CG31221 + chr3R 20682726 intergenic not near genes chr3R 21907536 intergenic CG6678 + chr3R_10_20680001 chr3R_20680001 RAL-492 2229 chr3R 20177845 20177845 chr3R 21907536 21907536 7 1729691 7.0 21.5 14.2 0.5 1729691 chr3R 20177845 intergenic not near genes chr3R 21042690 intergenic Dhc93AB - chr3R 21907536 intergenic CG6678 + chr3R_7_21040001 chr3R_21040001 RAL-492 2230 chr3R 21337429 21337429 chr3R 21907536 21907536 6 570107 10.0 21.5 15.8 0.4 570107 chr3R 21337429 intron CG16791 - chr3R 21622482 intron E2f - chr3R 21907536 intergenic CG6678 + chr3R_6_21620001 chr3R_21620001 RAL-492 2231 chr3R 21907536 21907536 chr3R 28831801 28831802 56 6924266 24.0 19.0 21.5 2.5 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_56_25365001 chr3R_25365001 RAL-492 2232 chr3R 21907536 21907536 chr3R 29013339 29013340 13 7105804 24.0 31.5 27.8 0.5 7105804 chr3R 21907536 intergenic CG6678 + chr3R 25460438 intron Fur1 - chr3R 29013340 intron wat - chr3R_13_25460001 chr3R_25460001 RAL-492 2233 chr3R 21924024 21924047 chr3R 21924101 21924144 5 94 5.5 0.0 2.8 1.3 120 chr3R 21924024 intergenic not near genes chr3R 21924084 intergenic not near genes chr3R 21924144 intergenic not near genes chr3R_5_21920001 chr3R_21920001 RAL-492 2234 chr3R 22057508 22057532 chr3R 22057602 22057630 5 97 1.5 4.0 2.8 1.3 122 chr3R 22057508 intron how + chr3R 22057569 intron how + chr3R 22057630 intron how + chr3R_5_22055001 chr3R_22055001 RAL-492 2235 chr3R 22234700 22234711 chr3R 22236011 22236049 pogo 5 1333 1.5 5.0 3.2 1.2 1349 chr3R 22234700 intron SKIP + chr3R 22235374 intron SKIP + chr3R 22236049 intron SKIP + chr3R_5_22235001 chr3R_22235001 RAL-492 2236 chr3R 22239476 22239525 chr3R 22248556 22248559 roo 6 9064 2.5 0.5 1.5 2.4 9083 chr3R 22239476 intron SKIP + chr3R 22244018 intron SKIP + chr3R 22248559 intron SKIP + chr3R_6_22240001 chr3R_22240001 RAL-492 2237 chr3R 22428557 22428607 chr3R 22428653 22428701 14 92 2.5 2.5 2.5 4.0 144 chr3R 22428557 intron CG13847 - chr3R 22428629 intron CG13847 - chr3R 22428701 intron CG13847 - chr3R_14_22425001 chr3R_22425001 RAL-492 2238 chr3R 22430296 22430345 chr3R 22430401 22430450 11 102 0.5 6.0 3.2 2.6 154 chr3R 22430296 intron CG13847 - chr3R 22430373 intron CG13847 - chr3R 22430450 intron CG13847 - chr3R_11_22430001 chr3R_22430001 RAL-492 2239 chr3R 22433077 22433097 chr3R 22433194 22433210 5 114 10.0 6.5 8.2 0.5 133 chr3R 22433077 intron CG13847 - chr3R 22433144 intron CG13847 - chr3R 22433210 intron CG13847 - chr3R_5_22430001 chr3R_22430001 RAL-492 2240 chr3R 22450548 22450574 chr3R 22453189 22453234 NOF 8 2648 5.0 9.0 7.0 1.0 2686 chr3R 22450548 intron CG34376 + chr3R 22451891 intron CG34376 + chr3R 22453234 intron CG34376 + chr3R_8_22450001 chr3R_22450001 RAL-492 2241 chr3R 22507773 22507816 chr3R 22507876 22507920 11 98 4.5 6.5 5.5 1.7 147 chr3R 22507773 intron Octbeta1R + chr3R 22507846 intron Octbeta1R + chr3R 22507920 intron Octbeta1R + chr3R_11_22505001 chr3R_22505001 RAL-492 2242 chr3R 22538421 22538470 chr3R 22538526 22538575 8 105 1.0 5.5 3.2 1.9 154 chr3R 22538421 intron CG5326 - chr3R 22538498 intron CG5326 - chr3R 22538575 intron CG5326 - chr3R_8_22535001 chr3R_22535001 RAL-492 2243 chr3R 22797742 22797936 chr3R 22797845 22798051 16 102 0.5 0.0 0.2 13.3 309 chr3R 22797742 intergenic not near genes chr3R 22797896 intergenic not near genes chr3R 22798051 intergenic not near genes chr3R_16_22795001 chr3R_22795001 RAL-492 2244 chr3R 22840800 22840831 chr3R 22841281 22841294 12 476 7.5 6.5 7.0 1.5 494 chr3R 22840800 intergenic not near genes chr3R 22841047 intergenic not near genes chr3R 22841294 intergenic not near genes chr3R_12_22840001 chr3R_22840001 RAL-492 2245 chr3R 22840833 22840849 chr3R 22841276 22841305 6 460 3.0 6.5 4.8 1.0 472 chr3R 22840833 intergenic not near genes chr3R 22841069 intergenic not near genes chr3R 22841305 intergenic not near genes chr3R_6_22840001 chr3R_22840001 RAL-492 2246 chr3R 22974264 22974309 chr3R 22974368 22974407 12 101 0.0 1.5 0.8 6.7 143 chr3R 22974264 intergenic not near genes chr3R 22974336 intergenic not near genes chr3R 22974407 intergenic not near genes chr3R_12_22970001 chr3R_22970001 RAL-492 2247 chr3R 22993484 22993538 chr3R 22993639 22993676 14 144 1.5 3.5 2.5 4.0 192 chr3R 22993484 intron Nha2 - chr3R 22993580 intron Nha2 - chr3R 22993676 intron Nha2 - chr3R_14_22990001 chr3R_22990001 RAL-492 2248 chr3R 23090388 23090432 chr3R 23090488 23090535 13 100 5.0 6.0 5.5 2.0 147 chr3R 23090388 intron CG13830 - chr3R 23090462 intron CG13830 - chr3R 23090535 intron CG13830 - chr3R_13_23090001 chr3R_23090001 RAL-492 2249 chr3R 23101367 23101411 chr3R 23101472 23101523 11 106 3.0 2.0 2.5 3.1 156 chr3R 23101367 intron CG13830 - chr3R 23101445 intron CG13830 - chr3R 23101523 intron CG13830 - chr3R_11_23100001 chr3R_23100001 RAL-492 2250 chr3R 23242301 23242313 chr3R 23242381 23242393 4 78 9.0 3.5 6.2 0.6 92 chr3R 23242301 intron CG4467 - chr3R 23242347 intron CG4467 - chr3R 23242393 intron CG4467 - chr3R_4_23240001 chr3R_23240001 RAL-492 2251 chr3R 23291230 23291283 chr3R 23291336 23291363 14 96 4.0 6.5 5.2 2.3 133 chr3R 23291230 3` UTR pnt - chr3R 23291296 3` UTR pnt - chr3R 23291363 3` UTR pnt - chr3R_14_23290001 chr3R_23290001 RAL-492 2252 chr3R 23303068 23303098 chr3R 23303166 23303195 6 95 6.0 3.0 4.5 1.1 127 chr3R 23303068 intron pnt - chr3R 23303132 intron pnt - chr3R 23303195 intron pnt - chr3R_6_23300001 chr3R_23300001 RAL-492 2253 chr3R 23311660 23311703 chr3R 23311774 23311815 4 107 4.5 2.5 3.5 0.9 155 chr3R 23311660 intron pnt - chr3R 23311738 intron pnt - chr3R 23311815 intron pnt - chr3R_4_23310001 chr3R_23310001 RAL-492 2254 chr3R 23558382 23558418 chr3R 23560183 23560193 Bari1 8 1798 3.5 2.0 2.8 2.1 1811 chr3R 23558382 intron beat-IV + chr3R 23559288 intron beat-IV + chr3R 23560193 intron beat-IV + chr3R_8_23555001 chr3R_23555001 RAL-492 2255 chr3R 23564420 23564468 chr3R 23564584 23564625 11 163 2.5 2.0 2.2 3.4 205 chr3R 23564420 intron beat-IV + chr3R 23564522 intron beat-IV + chr3R 23564625 intron beat-IV + chr3R_11_23560001 chr3R_23560001 RAL-492 2256 chr3R 23640076 23640093 chr3R 23640150 23640194 9 95 0.0 7.0 3.5 2.0 118 chr3R 23640076 intron CG31145 - chr3R 23640135 intron CG31145 - chr3R 23640194 intron CG31145 - chr3R_9_23640001 chr3R_23640001 RAL-492 2257 chr3R 23684678 23684727 chr3R 23685183 23685203 roo 9 488 4.5 4.0 4.2 1.7 525 chr3R 23684678 exon CG18754 + chr3R 23684940 intron CG18754 + chr3R 23685203 exon CG18754 + chr3R_9_23680001 chr3R_23680001 RAL-492 2258 chr3R 23714061 23714068 chr3R 23714168 23714168 7 106 3.0 0.0 1.5 2.8 107 chr3R 23714061 intron nau - chr3R 23714114 intron nau - chr3R 23714168 intron nau - chr3R_7_23710001 chr3R_23710001 RAL-492 2259 chr3R 23828396 23828444 chr3R 23828491 23828530 12 92 2.5 6.5 4.5 2.2 134 chr3R 23828396 intron CG34355 + chr3R 23828463 intron CG34355 + chr3R 23828530 intron CG34355 + chr3R_12_23825001 chr3R_23825001 RAL-492 2260 chr3R 23835392 23835426 chr3R 23844562 23844596 roo 8 9170 6.5 3.0 4.8 1.4 9204 chr3R 23835392 intron CG34355 + chr3R 23839994 intron CG34355 + chr3R 23844596 intron CG34355 + chr3R_8_23835001 chr3R_23835001 RAL-492 2261 chr3R 23871239 23871279 chr3R 23871408 23871413 10 165 6.5 7.5 7.0 1.2 174 chr3R 23871239 intron Pli - chr3R 23871326 intron Pli - chr3R 23871413 intron Pli - chr3R_10_23870001 chr3R_23870001 RAL-492 2262 chr3R 23888083 23888114 chr3R 23888189 23888200 11 104 3.0 5.5 4.2 2.1 117 chr3R 23888083 intron Pli - chr3R 23888142 intron Pli - chr3R 23888200 intron Pli - chr3R_11_23885001 chr3R_23885001 RAL-492 2263 chr3R 23944890 23944932 chr3R 23944995 23945020 22 101 3.5 5.0 4.2 4.2 130 chr3R 23944890 intron CG12268 - chr3R 23944955 intron CG12268 - chr3R 23945020 exon CG12268 - chr3R_22_23940001 chr3R_23940001 RAL-492 2264 chr3R 23949025 23949064 chr3R 23949118 23949160 6 91 5.5 1.5 3.5 1.3 135 chr3R 23949025 intergenic not near genes chr3R 23949092 intergenic not near genes chr3R 23949160 intergenic not near genes chr3R_6_23945001 chr3R_23945001 RAL-492 2265 chr3R 24070770 24070804 chr3R 24070947 24070971 5 175 5.0 4.0 4.5 0.9 201 chr3R 24070770 intron 4EHP - chr3R 24070870 intron 4EHP - chr3R 24070971 intron 4EHP - chr3R_5_24070001 chr3R_24070001 RAL-492 2266 chr3R 24072075 24072120 chr3R 24072521 24072576 jockey 7 445 3.0 0.0 1.5 2.8 501 chr3R 24072075 intron 4EHP - chr3R 24072326 intron 4EHP - chr3R 24072576 intron 4EHP - chr3R_7_24070001 chr3R_24070001 RAL-492 2267 chr3R 24076902 24076932 chr3R 24078387 24078392 hobo 4 1480 6.0 4.5 5.2 0.6 1490 chr3R 24076902 intron 4EHP - chr3R 24077647 intron 4EHP - chr3R 24078392 intron 4EHP - chr3R_4_24075001 chr3R_24075001 RAL-492 2268 chr3R 24076934 24076946 chr3R 24078382 24078431 hobo 4 1475 3.0 4.5 3.8 0.8 1497 chr3R 24076934 intron 4EHP - chr3R 24077682 intron 4EHP - chr3R 24078431 intron 4EHP - chr3R_4_24075001 chr3R_24075001 RAL-492 2269 chr3R 24100437 24100484 chr3R 24100552 24100599 6 115 1.5 2.5 2.0 2.0 162 chr3R 24100437 intron 4EHP - chr3R 24100518 intron 4EHP - chr3R 24100599 intron 4EHP - chr3R_6_24100001 chr3R_24100001 RAL-492 2270 chr3R 24199721 24199771 chr3R 24199819 24199867 20 94 2.0 3.0 2.5 5.7 146 chr3R 24199721 intron twin - chr3R 24199794 intron twin - chr3R 24199867 intron twin - chr3R_20_24195001 chr3R_24195001 RAL-492 2271 chr3R 24207211 24207243 chr3R 24212295 24212339 flea 6 5091 6.0 10.5 8.2 0.7 5128 chr3R 24207211 intron twin - chr3R 24209775 intron twin - chr3R 24212339 intron twin - chr3R_6_24205001 chr3R_24205001 RAL-492 2272 chr3R 24421022 24421068 chr3R 24421121 24421172 10 99 4.5 3.0 3.8 2.1 150 chr3R 24421022 intron nAChRalpha1 - chr3R 24421097 intron nAChRalpha1 - chr3R 24421172 intron nAChRalpha1 - chr3R_10_24420001 chr3R_24420001 RAL-492 2273 chr3R 24431580 24431626 chr3R 24431679 24431725 12 98 5.0 0.0 2.5 3.4 145 chr3R 24431580 intron nAChRalpha1 - chr3R 24431652 intron nAChRalpha1 - chr3R 24431725 intron nAChRalpha1 - chr3R_12_24430001 chr3R_24430001 RAL-492 2274 chr3R 24434222 24434258 chr3R 24434320 24434356 6 96 3.0 3.0 3.0 1.5 134 chr3R 24434222 intron nAChRalpha1 - chr3R 24434289 intron nAChRalpha1 - chr3R 24434356 intron nAChRalpha1 - chr3R_6_24430001 chr3R_24430001 RAL-492 2275 chr3R 24441638 24441649 chr3R 24441901 24441918 4 266 2.5 3.0 2.8 1.1 280 chr3R 24441638 intron nAChRalpha1 - chr3R 24441778 intron nAChRalpha1 - chr3R 24441918 intron nAChRalpha1 - chr3R_4_24440001 chr3R_24440001 RAL-492 2276 chr3R 24493041 24493084 chr3R 24493147 24493189 12 105 5.5 6.0 5.8 1.8 148 chr3R 24493041 intergenic not near genes chr3R 24493115 intergenic not near genes chr3R 24493189 intergenic not near genes chr3R_12_24490001 chr3R_24490001 RAL-492 2277 chr3R 24493259 24493265 chr3R 24493508 24493514 BS 5 249 10.0 4.5 7.2 0.6 255 chr3R 24493259 intergenic not near genes chr3R 24493386 intergenic not near genes chr3R 24493514 intergenic not near genes chr3R_5_24490001 chr3R_24490001 RAL-492 2278 chr3R 24493270 24493284 chr3R 24493506 24493533 BS 7 245 7.5 4.5 6.0 1.0 263 chr3R 24493270 intergenic not near genes chr3R 24493402 intergenic not near genes chr3R 24493533 intergenic not near genes chr3R_7_24490001 chr3R_24490001 RAL-492 2279 chr3R 24493285 24493305 chr3R 24493502 24493550 BS 9 243 5.5 4.5 5.0 1.5 265 chr3R 24493285 intergenic not near genes chr3R 24493418 intergenic not near genes chr3R 24493550 intergenic not near genes chr3R_9_24490001 chr3R_24490001 RAL-492 2280 chr3R 24527783 24527827 chr3R 24527894 24527938 9 111 1.0 2.0 1.5 3.6 155 chr3R 24527783 intergenic CG13618 +,CG6607 + chr3R 24527860 intergenic CG6607 +,CG13618 + chr3R 24527938 intergenic CG6607 +,CG13618 + chr3R_9_24525001 chr3R_24525001 RAL-492 2281 chr3R 24594658 24594667 chr3R 24594918 24594927 pogo 4 260 4.5 6.0 5.2 0.6 269 chr3R 24594658 intron mld + chr3R 24594792 intron mld + chr3R 24594927 intron mld + chr3R_4_24590001 chr3R_24590001 RAL-492 2282 chr3R 24635640 24635681 chr3R 24635736 24635775 9 98 2.0 2.5 2.2 2.8 135 chr3R 24635640 3` UTR puf - chr3R 24635708 3` UTR puf - chr3R 24635775 3` UTR puf - chr3R_9_24635001 chr3R_24635001 RAL-492 2283 chr3R 24670141 24670194 chr3R 24670245 24670297 14 103 0.5 2.0 1.2 6.4 156 chr3R 24670141 intron slo + chr3R 24670219 intron slo + chr3R 24670297 intron slo + chr3R_14_24670001 chr3R_24670001 RAL-492 2284 chr3R 24671219 24671250 chr3R 24671298 24671344 8 83 4.5 2.0 3.2 1.9 125 chr3R 24671219 intron slo + chr3R 24671282 intron slo + chr3R 24671344 intron slo + chr3R_8_24670001 chr3R_24670001 RAL-492 2285 chr3R 24730075 24730092 chr3R 24732473 24732489 Doc 4 2398 12.0 0.5 6.2 0.6 2414 chr3R 24730075 intron tok + chr3R 24731282 intron tok + chr3R 24732489 intron tok + chr3R_4_24730001 chr3R_24730001 RAL-492 2286 chr3R 24730094 24730123 chr3R 24732468 24732474 Doc 5 2378 4.0 0.5 2.2 1.6 2380 chr3R 24730094 intron tok + chr3R 24731284 intron tok + chr3R 24732474 intron tok + chr3R_5_24730001 chr3R_24730001 RAL-492 2287 chr3R 24792034 24792041 chr3R 24792120 24792135 5 93 0.0 6.0 3.0 1.2 101 chr3R 24792034 intron Ets96B + chr3R 24792084 intron Ets96B + chr3R 24792135 intron Ets96B + chr3R_5_24790001 chr3R_24790001 RAL-492 2288 chr3R 24825598 24825638 chr3R 24825711 24825738 5 106 4.0 0.0 2.0 1.7 140 chr3R 24825598 5` UTR niki - chr3R 24825668 intergenic niki -,CG43166 - chr3R 24825738 intergenic CG43166 -,niki - chr3R_5_24825001 chr3R_24825001 RAL-492 2289 chr3R 24842082 24842136 chr3R 24842187 24842237 20 104 5.5 2.5 4.0 4.0 155 chr3R 24842082 5` UTR Esp + chr3R 24842160 5` UTR Esp + chr3R 24842237 5` UTR Esp + chr3R_20_24840001 chr3R_24840001 RAL-492 2290 chr3R 24845978 24846019 chr3R 24846088 24846117 7 108 4.0 6.0 5.0 1.2 139 chr3R 24845978 intron Esp + chr3R 24846048 intron Esp + chr3R 24846117 intron Esp + chr3R_7_24845001 chr3R_24845001 RAL-492 2291 chr3R 24893460 24893489 chr3R 24893560 24893589 5 100 3.0 3.5 3.2 1.2 129 chr3R 24893460 intron CG31121 - chr3R 24893524 intron CG31121 - chr3R 24893589 intron CG31121 - chr3R_5_24890001 chr3R_24890001 RAL-492 2292 chr3R 24927123 24927158 chr3R 24931918 24931940 Doc 11 4802 2.5 3.5 3.0 2.8 4817 chr3R 24927123 intergenic Trf4-2 + chr3R 24929532 intergenic not near genes chr3R 24931940 intergenic CG11771 + chr3R_11_24925001 chr3R_24925001 RAL-492 2293 chr3R 24973929 24973977 chr3R 24974024 24974073 20 93 3.5 6.0 4.8 3.4 144 chr3R 24973929 intergenic not near genes chr3R 24974001 intergenic not near genes chr3R 24974073 intergenic not near genes chr3R_20_24970001 chr3R_24970001 RAL-492 2294 chr3R 25046825 25046840 chr3R 25046898 25046916 5 86 5.0 6.5 5.8 0.7 91 chr3R 25046825 exon CG11786 + chr3R 25046870 exon CG11786 + chr3R 25046916 exon CG11786 + chr3R_5_25045001 chr3R_25045001 RAL-492 2295 chr3R 25064523 25064555 chr3R 25064641 25064673 8 115 0.0 6.0 3.0 2.0 150 chr3R 25064523 3` UTR veli - chr3R 25064598 3` UTR veli - chr3R 25064673 exon veli - chr3R_8_25060001 chr3R_25060001 RAL-492 2296 chr3R 25209585 25209595 chr3R 25209687 25209697 5 102 0.5 9.0 4.8 0.9 112 chr3R 25209585 intron CG13654 + chr3R 25209641 intron CG13654 + chr3R 25209697 intron CG13654 + chr3R_5_25205001 chr3R_25205001 RAL-492 2297 chr3R 25209600 25209627 chr3R 25209679 25209718 13 98 0.5 7.5 4.0 2.6 118 chr3R 25209600 intron CG13654 + chr3R 25209659 intron CG13654 + chr3R 25209718 intron CG13654 + chr3R_13_25205001 chr3R_25205001 RAL-492 2298 chr3R 25368453 25368493 chr3R 25368591 25368603 15 135 1.5 0.0 0.8 8.3 150 chr3R 25368453 intron Fur1 - chr3R 25368528 intron Fur1 - chr3R 25368603 intron Fur1 - chr3R_15_25365001 chr3R_25365001 RAL-492 2299 chr3R 7773344 7773344 chr3R 25538124 25538124 5 17764780 15.5 8.0 11.8 0.4 17764780 chr3R 7773344 intergenic not near genes chr3R 16655734 intergenic modSP - chr3R 25538124 intron msi + chr3R_5_16655001 chr3R_16655001 RAL-492 2300 chr3R 25671219 25671274 chr3R 25671337 25671394 14 118 2.5 1.5 2.0 4.7 175 chr3R 25671219 intron Lgr3 + chr3R 25671306 intron Lgr3 + chr3R 25671394 intron Lgr3 + chr3R_14_25670001 chr3R_25670001 RAL-492 2301 chr3R 25725817 25725860 chr3R 25734997 25735040 roo 7 9178 2.5 3.0 2.8 1.8 9223 chr3R 25725817 intron LpR2 - chr3R 25730428 intron LpR2 - chr3R 25735040 intron LpR2 - chr3R_7_25730001 chr3R_25730001 RAL-492 2302 chr3R 25801246 25801294 chr3R 25802249 25802288 10 1000 2.5 3.5 3.0 2.5 1042 chr3R 25801246 intergenic not near genes chr3R 25801767 intergenic not near genes chr3R 25802288 intergenic not near genes chr3R_10_25800001 chr3R_25800001 RAL-492 2303 chr3R 25810292 25810335 chr3R 25810411 25810440 10 115 6.0 2.5 4.2 1.9 148 chr3R 25810292 intergenic not near genes chr3R 25810366 intergenic not near genes chr3R 25810440 intergenic not near genes chr3R_10_25810001 chr3R_25810001 RAL-492 2304 chr3R 25832675 25832723 chr3R 25841877 25841900 roo 16 9197 3.5 7.5 5.5 2.5 9225 chr3R 25832675 exon alpha4GT2 + chr3R 25837288 intron alpha4GT2 + chr3R 25841900 exon alpha4GT2 + chr3R_16_25835001 chr3R_25835001 RAL-492 2305 chr3R 25843623 25843661 chr3R 25843773 25843811 7 149 0.5 3.5 2.0 2.3 188 chr3R 25843623 intergenic CR45653 + chr3R 25843717 intergenic CR45653 + chr3R 25843811 intergenic CR45653 + chr3R_7_25840001 chr3R_25840001 RAL-492 2306 chr3R 25847671 25847721 chr3R 25847855 25847900 14 178 2.5 3.0 2.8 3.7 229 chr3R 25847671 intergenic CR45656 -,CR45657 + chr3R 25847786 intergenic CR45656 -,CR45657 + chr3R 25847900 intergenic CR45657 +,CR45656 - chr3R_14_25845001 chr3R_25845001 RAL-492 2307 chr3R 25869195 25869204 chr3R 25869409 25869418 5 214 14.5 2.5 8.5 0.5 223 chr3R 25869195 intron CG5890 + chr3R 25869306 intron CG5890 + chr3R 25869418 intron CG5890 + chr3R_5_25865001 chr3R_25865001 RAL-492 2308 chr3R 25869206 25869236 chr3R 25869403 25869450 14 209 8.5 2.0 5.2 2.3 244 chr3R 25869206 intron CG5890 + chr3R 25869328 intron CG5890 + chr3R 25869450 intron CG5890 + chr3R_14_25865001 chr3R_25865001 RAL-492 2309 chr3R 25900880 25900929 chr3R 25903579 25903627 16 2698 44.0 33.0 38.5 0.4 2747 chr3R 25900880 exon CG31091 + chr3R 25902254 intergenic CG31091 +,CG31089 + chr3R 25903627 exon,intron CG31089 +,CR43259 - chr3R_16_25900001 chr3R_25900001 RAL-492 2310 chr3R 25948757 25948779 chr3R 25948844 25948870 4 99 8.0 2.5 5.2 0.6 113 chr3R 25948757 intron CCAP-R - chr3R 25948814 intron CCAP-R - chr3R 25948870 intron CCAP-R - chr3R_4_25945001 chr3R_25945001 RAL-492 2311 chr3R 26094618 26094643 chr3R 26094706 26094720 10 97 4.0 5.5 4.8 1.7 102 chr3R 26094618 intron dys - chr3R 26094669 intron dys - chr3R 26094720 intron dys - chr3R_10_26090001 chr3R_26090001 RAL-492 2312 chr3R 26122447 26122453 chr3R 26122543 26122548 4 96 7.0 7.5 7.2 0.5 101 chr3R 26122447 intron CG31324 + chr3R 26122498 intron CG31324 + chr3R 26122548 intron CG31324 + chr3R_4_26120001 chr3R_26120001 RAL-492 2313 chr3R 26122461 26122463 chr3R 26122540 26122558 4 92 6.0 7.0 6.5 0.5 97 chr3R 26122461 intron CG31324 + chr3R 26122510 intron CG31324 + chr3R 26122558 intron CG31324 + chr3R_4_26120001 chr3R_26120001 RAL-492 2314 chr3R 26126247 26126289 chr3R 26126372 26126409 10 122 3.5 4.0 3.8 2.1 162 chr3R 26126247 intron CG31324 + chr3R 26126328 intron CG31324 + chr3R 26126409 intron CG31324 + chr3R_10_26125001 chr3R_26125001 RAL-492 2315 chr3R 26215770 26215788 chr3R 26221744 26221762 297 4 5974 4.0 1.5 2.8 1.1 5992 chr3R 26215770 intergenic not near genes chr3R 26218766 intergenic not near genes chr3R 26221762 intergenic not near genes chr3R_4_26215001 chr3R_26215001 RAL-492 2316 chr3R 26235507 26235520 chr3R 26235575 26235576 4 73 3.0 6.0 4.5 0.7 69 chr3R 26235507 5` UTR CR42745 + chr3R 26235542 5` UTR CR42745 + chr3R 26235576 5` UTR CR42745 + chr3R_4_26235001 chr3R_26235001 RAL-492 2317 chr3R 26240450 26240488 chr3R 26240603 26240630 20 157 4.5 1.0 2.8 5.3 180 chr3R 26240450 intron CR42745 + chr3R 26240540 intron CR42745 + chr3R 26240630 intron CR42745 + chr3R_20_26240001 chr3R_26240001 RAL-492 2318 chr3R 26294697 26294749 chr3R 26294794 26294847 13 96 3.0 3.5 3.2 3.1 150 chr3R 26294697 intergenic not near genes chr3R 26294772 intergenic not near genes chr3R 26294847 intergenic not near genes chr3R_13_26290001 chr3R_26290001 RAL-492 2319 chr3R 26325346 26325385 chr3R 26325452 26325499 4 100 5.5 0.0 2.8 1.1 153 chr3R 26325346 intron CG33970 + chr3R 26325422 intron CG33970 + chr3R 26325499 intron CG33970 + chr3R_4_26325001 chr3R_26325001 RAL-492 2320 chr3R 26332540 26332580 chr3R 26332702 26332740 11 160 3.5 3.0 3.2 2.6 200 chr3R 26332540 intron CG33970 + chr3R 26332640 intron CG33970 + chr3R 26332740 intron CG33970 + chr3R_11_26330001 chr3R_26330001 RAL-492 2321 chr3R 26339209 26339258 chr3R 26339324 26339370 23 114 3.5 3.5 3.5 5.1 161 chr3R 26339209 intron CG33970 + chr3R 26339290 intron CG33970 + chr3R 26339370 intron CG33970 + chr3R_23_26335001 chr3R_26335001 RAL-492 2322 chr3R 26376303 26376358 chr3R 26385483 26385527 roo 17 9171 2.5 0.0 1.2 7.7 9224 chr3R 26376303 intergenic not near genes chr3R 26380915 intergenic not near genes chr3R 26385527 intergenic not near genes chr3R_17_26380001 chr3R_26380001 RAL-492 2323 chr3R 26390442 26390485 chr3R 26390548 26390591 14 110 4.0 1.0 2.5 4.0 149 chr3R 26390442 intergenic not near genes chr3R 26390516 intergenic not near genes chr3R 26390591 intergenic not near genes chr3R_14_26390001 chr3R_26390001 RAL-492 2324 chr3R 26510505 26510523 chr3R 26519580 26519597 roo 5 9075 5.5 5.5 5.5 0.8 9092 chr3R 26510505 intron plum - chr3R 26515051 intron plum - chr3R 26519597 intron,5` UTR plum -,CR45226 + chr3R_5_26515001 chr3R_26515001 RAL-492 2325 chr3R 26558316 26558360 chr3R 26565638 26565669 Stalker4 13 7319 6.5 1.5 4.0 2.6 7353 chr3R 26558316 intron scrib + chr3R 26561992 intron scrib + chr3R 26565669 intron scrib + chr3R_13_26560001 chr3R_26560001 RAL-492 2326 chr3R 26641617 26641662 chr3R 26641724 26641728 21 98 5.0 5.0 5.0 3.5 111 chr3R 26641617 intergenic not near genes chr3R 26641672 intergenic not near genes chr3R 26641728 intergenic not near genes chr3R_21_26640001 chr3R_26640001 RAL-492 2327 chr3R 26642722 26642752 chr3R 26643124 26643166 jockey 8 412 5.5 4.0 4.8 1.4 444 chr3R 26642722 intergenic not near genes chr3R 26642944 intergenic not near genes chr3R 26643166 intergenic not near genes chr3R_8_26640001 chr3R_26640001 RAL-492 2328 chr3R 26682593 26682643 chr3R 26682732 26682781 10 140 1.0 3.5 2.2 3.1 188 chr3R 26682593 intergenic not near genes chr3R 26682687 intergenic not near genes chr3R 26682781 intergenic not near genes chr3R_10_26680001 chr3R_26680001 RAL-492 2329 chr3R 26810536 26810580 chr3R 26811041 26811085 roo 17 503 2.5 3.5 3.0 4.2 549 chr3R 26810536 intron Tl + chr3R 26810810 intron Tl + chr3R 26811085 intron Tl + chr3R_17_26810001 chr3R_26810001 RAL-492 2330 chr3R 26845554 26845607 chr3R 26845654 26845671 19 93 4.5 7.0 5.8 2.8 117 chr3R 26845554 intron Lerp - chr3R 26845612 intron Lerp - chr3R 26845671 intron Lerp - chr3R_19_26845001 chr3R_26845001 RAL-492 2331 chr3R 26848042 26848073 chr3R 26848140 26848171 7 96 1.0 5.5 3.2 1.7 129 chr3R 26848042 intron Lerp - chr3R 26848106 intron Lerp - chr3R 26848171 intron Lerp - chr3R_7_26845001 chr3R_26845001 RAL-492 2332 chr3R 26852465 26852506 chr3R 26852564 26852613 5 102 0.0 2.5 1.2 2.3 148 chr3R 26852465 intron Lerp - chr3R 26852539 intron Lerp - chr3R 26852613 intron Lerp - chr3R_5_26850001 chr3R_26850001 RAL-492 2333 chr3R 26859744 26859760 chr3R 26859870 26859890 8 135 4.0 1.5 2.8 2.1 146 chr3R 26859744 intron Lerp - chr3R 26859817 intron Lerp - chr3R 26859890 intron Lerp - chr3R_8_26855001 chr3R_26855001 RAL-492 2334 chr3R 26983797 26983830 chr3R 26983900 26983933 4 103 0.0 4.5 2.2 1.2 136 chr3R 26983797 intron CG14253 + chr3R 26983865 intron CG14253 + chr3R 26983933 intron CG14253 + chr3R_4_26980001 chr3R_26980001 RAL-492 2335 chr3R 27007404 27007407 chr3R 27016543 27016562 roo 4 9147 6.0 3.0 4.5 0.7 9158 chr3R 27007404 intron RYa-R + chr3R 27011983 intron RYa-R + chr3R 27016562 intron RYa-R + chr3R_4_27010001 chr3R_27010001 RAL-492 2336 chr3R 27007410 27007436 chr3R 27016542 27016586 roo 4 9138 2.5 3.0 2.8 1.1 9176 chr3R 27007410 intron RYa-R + chr3R 27011998 intron RYa-R + chr3R 27016586 intron RYa-R + chr3R_4_27010001 chr3R_27010001 RAL-492 2337 chr3R 27019496 27019544 chr3R 27019607 27019660 11 106 4.0 4.0 4.0 2.2 164 chr3R 27019496 intron,exon RYa-R +,CG17191 - chr3R 27019578 intron,exon RYa-R +,CG17191 - chr3R 27019660 intron,intron RYa-R +,CG17191 - chr3R_11_27015001 chr3R_27015001 RAL-492 2338 chr3R 27028705 27028748 chr3R 27028804 27028845 9 99 2.5 2.5 2.5 2.6 140 chr3R 27028705 intron RYa-R + chr3R 27028775 intron RYa-R + chr3R 27028845 intron RYa-R + chr3R_9_27025001 chr3R_27025001 RAL-492 2339 chr3R 27051869 27051881 chr3R 27051967 27051975 5 96 3.5 3.5 3.5 1.1 106 chr3R 27051869 intron RYa-R + chr3R 27051922 intron RYa-R + chr3R 27051975 intron RYa-R + chr3R_5_27050001 chr3R_27050001 RAL-492 2340 chr3R 27073644 27073684 chr3R 27073747 27073787 6 96 3.5 2.5 3.0 1.5 143 chr3R 27073644 intergenic not near genes chr3R 27073716 intergenic not near genes chr3R 27073787 intergenic not near genes chr3R_6_27070001 chr3R_27070001 RAL-492 2341 chr3R 27140494 27140541 chr3R 27148124 27148171 412 17 7624 5.0 8.5 6.8 2.2 7677 chr3R 27140494 intron CG6051 - chr3R 27144332 intron CG6051 - chr3R 27148171 intron CG6051 - chr3R_17_27140001 chr3R_27140001 RAL-492 2342 chr3R 27292276 27292304 chr3R 27292390 27292411 10 119 2.0 4.0 3.0 2.5 135 chr3R 27292276 intergenic CG3348 - chr3R 27292344 intergenic CG3348 - chr3R 27292411 intergenic CG3348 - chr3R_10_27290001 chr3R_27290001 RAL-492 2343 chr3R 27315973 27316011 chr3R 27316068 27316089 14 92 3.5 2.0 2.8 3.7 116 chr3R 27315973 intron CG3339 - chr3R 27316031 intron CG3339 - chr3R 27316089 exon CG3339 - chr3R_14_27315001 chr3R_27315001 RAL-492 2344 chr3R 27317083 27317104 chr3R 27317183 27317193 7 96 11.0 5.5 8.2 0.8 110 chr3R 27317083 intron CG3339 - chr3R 27317138 intron CG3339 - chr3R 27317193 intron CG3339 - chr3R_7_27315001 chr3R_27315001 RAL-492 2345 chr3R 27329461 27329499 chr3R 27329558 27329596 5 97 3.0 3.0 3.0 1.2 135 chr3R 27329461 intergenic CG3330 - chr3R 27329528 intergenic CG3330 - chr3R 27329596 intergenic CG3330 - chr3R_5_27325001 chr3R_27325001 RAL-492 2346 chr3R 27342778 27342780 chr3R 27351377 27351381 Tirant 4 8600 13.5 3.0 8.2 0.4 8603 chr3R 27342778 intron CG42534 + chr3R 27347080 intron CG42534 + chr3R 27351381 intron CG42534 + chr3R_4_27345001 chr3R_27345001 RAL-492 2347 chr3R 27342792 27342826 chr3R 27351376 27351422 Tirant 11 8597 4.5 3.0 3.8 2.3 8630 chr3R 27342792 intron CG42534 + chr3R 27347107 intron CG42534 + chr3R 27351422 intron CG42534 + chr3R_11_27345001 chr3R_27345001 RAL-492 2348 chr3R 27377456 27377483 chr3R 27377561 27377591 7 105 9.0 4.5 6.8 0.9 135 chr3R 27377456 3` UTR side - chr3R 27377524 3` UTR side - chr3R 27377591 3` UTR side - chr3R_7_27375001 chr3R_27375001 RAL-492 2349 chr3R 27496577 27496601 chr3R 27496699 27496726 6 124 6.0 3.5 4.8 1.0 149 chr3R 27496577 intergenic not near genes chr3R 27496652 intergenic not near genes chr3R 27496726 intergenic not near genes chr3R_6_27495001 chr3R_27495001 RAL-492 2350 chr3R 27521137 27521182 chr3R 27530366 27530411 roo 5 9229 5.5 1.5 3.5 1.1 9274 chr3R 27521137 intron CG12885 + chr3R 27525774 intron CG12885 + chr3R 27530411 intron CG12885 + chr3R_5_27525001 chr3R_27525001 RAL-492 2351 chr3R 27535763 27535815 chr3R 27535880 27535885 14 100 2.0 2.5 2.2 4.4 122 chr3R 27535763 intergenic CR44289 - chr3R 27535824 intergenic CR44289 - chr3R 27535885 3` UTR CR44289 - chr3R_14_27535001 chr3R_27535001 RAL-492 2352 chr3R 27627070 27627115 chr3R 27627192 27627208 14 114 4.0 4.5 4.2 2.7 138 chr3R 27627070 intron Tusp + chr3R 27627139 intron Tusp + chr3R 27627208 intron Tusp + chr3R_14_27625001 chr3R_27625001 RAL-492 2353 chr3R 27648603 27648867 chr3R 27648680 27648964 23 86 7.0 0.0 3.5 5.1 361 chr3R 27648603 intron tau - chr3R 27648784 intron tau - chr3R 27648964 intron tau - chr3R_23_27645001 chr3R_27645001 RAL-492 2354 chr3R 27660700 27660747 chr3R 27660795 27660825 12 91 3.5 7.0 5.2 1.9 125 chr3R 27660700 intergenic not near genes chr3R 27660762 intergenic not near genes chr3R 27660825 intergenic not near genes chr3R_12_27660001 chr3R_27660001 RAL-492 2355 chr3R 27705365 27705392 chr3R 27705437 27705470 11 85 2.0 3.0 2.5 3.1 105 chr3R 27705365 exon CG12428 - chr3R 27705418 intron CG12428 - chr3R 27705470 exon CG12428 - chr3R_11_27705001 chr3R_27705001 RAL-492 2356 chr3R 27725549 27725584 chr3R 27731011 27731046 I-element 5 5462 4.5 4.0 4.2 1.0 5497 chr3R 27725549 intergenic not near genes chr3R 27728298 intergenic not near genes chr3R 27731046 intergenic not near genes chr3R_5_27725001 chr3R_27725001 RAL-492 2357 chr3R 27735467 27735509 chr3R 27735693 27735738 4 226 3.0 2.5 2.8 1.1 271 chr3R 27735467 intergenic not near genes chr3R 27735602 intergenic not near genes chr3R 27735738 intergenic not near genes chr3R_4_27735001 chr3R_27735001 RAL-492 2358 chr3R 27771518 27771525 chr3R 27771713 27771726 5 215 5.0 1.5 3.2 1.2 208 chr3R 27771518 intron CG34353 - chr3R 27771622 intron CG34353 - chr3R 27771726 intron CG34353 - chr3R_5_27770001 chr3R_27770001 RAL-492 2359 chr3R 27779258 27779284 chr3R 27779350 27779383 8 96 3.0 4.5 3.8 1.7 125 chr3R 27779258 exon CG34353 - chr3R 27779320 intron CG34353 - chr3R 27779383 intron CG34353 - chr3R_8_27775001 chr3R_27775001 RAL-492 2360 chr3R 27789063 27789109 chr3R 27789156 27789206 10 93 2.0 3.0 2.5 2.9 143 chr3R 27789063 exon CG34353 - chr3R 27789134 intron CG34353 - chr3R 27789206 intron CG34353 - chr3R_10_27785001 chr3R_27785001 RAL-492 2361 chr3R 27799919 27799962 chr3R 27800020 27800064 14 99 4.5 1.5 3.0 3.5 145 chr3R 27799919 intron CG34353 - chr3R 27799992 intron CG34353 - chr3R 27800064 intron CG34353 - chr3R_14_27795001 chr3R_27795001 RAL-492 2362 chr3R 27856744 27856775 chr3R 27858246 27858263 hopper2 7 1500 6.0 4.0 5.0 1.2 1519 chr3R 27856744 intron CG34353 - chr3R 27857504 intron CG34353 - chr3R 27858263 intron CG34353 - chr3R_7_27855001 chr3R_27855001 RAL-492 2363 chr3R 27856779 27856791 chr3R 27858245 27858285 hopper2 5 1482 3.5 4.0 3.8 1.0 1506 chr3R 27856779 intron CG34353 - chr3R 27857532 intron CG34353 - chr3R 27858285 intron CG34353 - chr3R_5_27855001 chr3R_27855001 RAL-492 2364 chr3R 27870274 27870322 chr3R 27870377 27870384 12 93 2.5 4.5 3.5 2.7 110 chr3R 27870274 intron CG34353 - chr3R 27870329 intron CG34353 - chr3R 27870384 intron CG34353 - chr3R_12_27870001 chr3R_27870001 RAL-492 2365 chr3R 27875692 27875725 chr3R 27882753 27882800 297 10 7070 3.5 6.0 4.8 1.7 7108 chr3R 27875692 intron CG34353 - chr3R 27879246 intron CG34353 - chr3R 27882800 intron CG34353 - chr3R_10_27875001 chr3R_27875001 RAL-492 2366 chr3R 27911230 27911260 chr3R 27911328 27911358 7 95 3.5 5.0 4.2 1.3 128 chr3R 27911230 intergenic not near genes chr3R 27911294 intergenic not near genes chr3R 27911358 intergenic not near genes chr3R_7_27910001 chr3R_27910001 RAL-492 2367 chr3R 28054432 28054475 chr3R 28054517 28054571 17 87 3.0 2.5 2.8 4.5 139 chr3R 28054432 intron CG34362 + chr3R 28054502 intron CG34362 + chr3R 28054571 intron CG34362 + chr3R_17_28050001 chr3R_28050001 RAL-492 2368 chr3R 28068484 28068523 chr3R 28073940 28073985 I-element 10 5458 1.5 3.5 2.5 2.9 5501 chr3R 28068484 intron CG34362 + chr3R 28071234 intron CG34362 + chr3R 28073985 intron CG34362 + chr3R_10_28070001 chr3R_28070001 RAL-492 2369 chr3R 28132484 28132495 chr3R 28132584 28132597 5 99 6.5 2.0 4.2 1.0 113 chr3R 28132484 intergenic not near genes chr3R 28132540 intergenic not near genes chr3R 28132597 intergenic not near genes chr3R_5_28130001 chr3R_28130001 RAL-492 2370 chr3R 28132503 28132519 chr3R 28132575 28132621 4 88 3.5 1.0 2.2 1.2 118 chr3R 28132503 intergenic not near genes chr3R 28132562 intergenic not near genes chr3R 28132621 intergenic not near genes chr3R_4_28130001 chr3R_28130001 RAL-492 2371 chr3R 28152328 28152360 chr3R 28152425 28152454 8 94 10.0 1.5 5.8 1.2 126 chr3R 28152328 intron CG34354 + chr3R 28152391 intron CG34354 + chr3R 28152454 intron CG34354 + chr3R_8_28150001 chr3R_28150001 RAL-492 2372 chr3R 28172953 28172976 chr3R 28173130 28173152 9 176 6.5 4.0 5.2 1.5 199 chr3R 28172953 intron CG34354 + chr3R 28173052 intron CG34354 + chr3R 28173152 intron CG34354 + chr3R_9_28170001 chr3R_28170001 RAL-492 2373 chr3R 28173652 28173703 chr3R 28181102 28181153 mdg1 11 7449 2.0 2.0 2.0 3.7 7501 chr3R 28173652 intron CG34354 + chr3R 28177402 intron CG34354 + chr3R 28181153 intron CG34354 + chr3R_11_28175001 chr3R_28175001 RAL-492 2374 chr3R 28253333 28253355 chr3R 28255861 28255885 jockey 5 2527 3.5 5.0 4.2 1.0 2552 chr3R 28253333 intergenic not near genes chr3R 28254609 intergenic not near genes chr3R 28255885 intergenic not near genes chr3R_5_28250001 chr3R_28250001 RAL-492 2375 chr3R 28352493 28352540 chr3R 28352852 28352894 14 359 4.0 11.0 7.5 1.6 401 chr3R 28352493 exon Or98b + chr3R 28352694 exon Or98b + chr3R 28352894 exon Or98b + chr3R_14_28350001 chr3R_28350001 RAL-492 2376 chr3R 28424228 28424277 chr3R 28424327 28424365 19 98 6.5 3.5 5.0 3.2 137 chr3R 28424228 intron beat-VI + chr3R 28424296 intron beat-VI + chr3R 28424365 intron beat-VI + chr3R_19_28420001 chr3R_28420001 RAL-492 2377 chr3R 28425234 28425249 chr3R 28425333 28425339 6 96 8.5 6.5 7.5 0.7 105 chr3R 28425234 intron beat-VI + chr3R 28425286 intron beat-VI + chr3R 28425339 intron beat-VI + chr3R_6_28425001 chr3R_28425001 RAL-492 2378 chr3R 28425252 28425270 chr3R 28425332 28425369 8 85 5.0 6.5 5.8 1.2 117 chr3R 28425252 intron beat-VI + chr3R 28425310 intron beat-VI + chr3R 28425369 intron beat-VI + chr3R_8_28425001 chr3R_28425001 RAL-492 2379 chr3R 28429442 28429642 chr3R 28429535 28429739 16 93 5.5 9.0 7.2 2.0 297 chr3R 28429442 intron beat-VI + chr3R 28429590 intron beat-VI + chr3R 28429739 intron beat-VI + chr3R_16_28425001 chr3R_28425001 RAL-492 2380 chr3R 28454187 28454206 chr3R 28454390 28454409 10 202 4.0 2.5 3.2 2.4 222 chr3R 28454187 intron beat-VI + chr3R 28454298 intron beat-VI + chr3R 28454409 intron beat-VI + chr3R_10_28450001 chr3R_28450001 RAL-492 2381 chr3R 28454208 28454232 chr3R 28454388 28454391 12 188 3.0 2.5 2.8 3.2 183 chr3R 28454208 intron beat-VI + chr3R 28454300 intron beat-VI + chr3R 28454391 intron beat-VI + chr3R_12_28450001 chr3R_28450001 RAL-492 2382 chr3R 28460783 28460814 chr3R 28460864 28460889 14 90 5.5 3.0 4.2 2.7 106 chr3R 28460783 intron beat-VI + chr3R 28460836 intron beat-VI + chr3R 28460889 intron beat-VI + chr3R_14_28460001 chr3R_28460001 RAL-492 2383 chr3R 28478423 28478447 chr3R 28478496 28478508 6 71 3.5 3.5 3.5 1.3 85 chr3R 28478423 intergenic not near genes chr3R 28478466 intergenic not near genes chr3R 28478508 intergenic not near genes chr3R_6_28475001 chr3R_28475001 RAL-492 2384 chr3R 28479143 28479166 chr3R 28479232 28479266 11 100 3.0 3.5 3.2 2.6 123 chr3R 28479143 intergenic not near genes chr3R 28479204 intergenic not near genes chr3R 28479266 intergenic not near genes chr3R_11_28475001 chr3R_28475001 RAL-492 2385 chr3R 28480306 28480354 chr3R 28480407 28480455 11 101 0.5 3.0 1.8 3.9 149 chr3R 28480306 intergenic not near genes chr3R 28480380 intergenic not near genes chr3R 28480455 intergenic not near genes chr3R_11_28480001 chr3R_28480001 RAL-492 2386 chr3R 28484353 28484378 chr3R 28486250 28486276 21 1898 41.0 87.5 64.2 0.3 1923 chr3R 28484353 intergenic CG1894 + chr3R 28485314 exon CG1894 + chr3R 28486276 intergenic CG1894 + chr3R_21_28485001 chr3R_28485001 RAL-492 2387 chr3R 28484380 28484394 chr3R 28486277 28486291 18 1898 47.0 50.0 48.5 0.4 1911 chr3R 28484380 intergenic CG1894 + chr3R 28485336 exon CG1894 + chr3R 28486291 intergenic CG1894 + chr3R_18_28485001 chr3R_28485001 RAL-492 2388 chr3R 28554680 28554726 chr3R 28554791 28554806 13 105 1.5 2.5 2.0 4.3 126 chr3R 28554680 intergenic not near genes chr3R 28554743 intergenic not near genes chr3R 28554806 intergenic not near genes chr3R_13_28550001 chr3R_28550001 RAL-492 2389 chr3R 28599357 28599388 chr3R 28599524 28599555 7 164 4.5 1.5 3.0 1.8 198 chr3R 28599357 intergenic Noa36 - chr3R 28599456 intergenic Noa36 - chr3R 28599555 intergenic Noa36 - chr3R_7_28595001 chr3R_28595001 RAL-492 2390 chr3R 28626178 28626185 chr3R 28626294 28626305 5 119 9.5 5.5 7.5 0.6 127 chr3R 28626178 intron CG10011 - chr3R 28626242 intron CG10011 - chr3R 28626305 intron CG10011 - chr3R_5_28625001 chr3R_28625001 RAL-492 2391 chr3R 28626186 28626227 chr3R 28626293 28626301 18 106 2.5 5.5 4.0 3.6 115 chr3R 28626186 intron CG10011 - chr3R 28626244 intron CG10011 - chr3R 28626301 intron CG10011 - chr3R_18_28625001 chr3R_28625001 RAL-492 2392 chr3R 21907534 21907536 chr3R 28831799 28831802 109 6924266 24.0 19.0 21.5 4.8 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_109_25365001 chr3R_25365001 RAL-492 2393 chr3R 28985047 28985085 chr3R 28985169 28985209 6 122 2.5 1.5 2.0 2.0 162 chr3R 28985047 intergenic not near genes chr3R 28985128 intergenic not near genes chr3R 28985209 intergenic not near genes chr3R_6_28985001 chr3R_28985001 RAL-492 2394 chr3R 21907534 21907536 chr3R 29013340 29013340 4 7105805 24.0 31.5 27.8 0.1 7105806 chr3R 21907534 intergenic CG6678 + chr3R 25460437 intron Fur1 - chr3R 29013340 intron wat - chr3R_4_25460001 chr3R_25460001 RAL-492 2395 chr3R 29047321 29047359 chr3R 29047420 29047458 5 99 0.5 3.0 1.8 1.8 137 chr3R 29047321 3` UTR Pkc98E + chr3R 29047390 3` UTR Pkc98E + chr3R 29047458 3` UTR Pkc98E + chr3R_5_29045001 chr3R_29045001 RAL-492 2396 chr3R 29070048 29070072 chr3R 29070149 29070172 10 101 4.0 3.5 3.8 2.1 124 chr3R 29070048 intron CG11873 + chr3R 29070110 intron CG11873 + chr3R 29070172 intron CG11873 + chr3R_10_29070001 chr3R_29070001 RAL-492 2397 chr3R 29079385 29079409 chr3R 29080777 29080801 NOF 12 1390 0.0 10.5 5.2 1.9 1416 chr3R 29079385 intron CG11873 + chr3R 29080093 intron CG11873 + chr3R 29080801 intron CG11873 + chr3R_12_29080001 chr3R_29080001 RAL-492 2398 chr3R 29151930 29151966 chr3R 29152038 29152078 11 110 0.0 3.5 1.8 3.9 148 chr3R 29151930 intergenic ligatin -,Slbp - chr3R 29152004 intergenic Slbp -,ligatin - chr3R 29152078 3` UTR Slbp - chr3R_11_29150001 chr3R_29150001 RAL-492 2399 chr3R 29164580 29164587 chr3R 29164679 29164686 5 99 13.0 5.0 9.0 0.5 106 chr3R 29164580 3` UTR CG11897 + chr3R 29164633 3` UTR CG11897 + chr3R 29164686 3` UTR CG11897 + chr3R_5_29160001 chr3R_29160001 RAL-492 2400 chr3R 29164593 29164622 chr3R 29164676 29164719 10 95 5.0 4.5 4.8 1.7 126 chr3R 29164593 3` UTR CG11897 + chr3R 29164656 3` UTR CG11897 + chr3R 29164719 3` UTR CG11897 + chr3R_10_29160001 chr3R_29160001 RAL-492 2401 chr3R 29213040 29213093 chr3R 29213142 29213195 22 101 4.5 5.0 4.8 3.8 155 chr3R 29213040 intergenic not near genes chr3R 29213118 intergenic not near genes chr3R 29213195 intergenic not near genes chr3R_22_29210001 chr3R_29210001 RAL-492 2402 chr3R 29238775 29238790 chr3R 29238890 29238924 10 130 3.5 3.5 3.5 2.2 149 chr3R 29238775 intergenic CG31427 -,CG11951 - chr3R 29238850 3` UTR CG31427 - chr3R 29238924 3` UTR CG31427 - chr3R_10_29235001 chr3R_29235001 RAL-492 2403 chr3R 29237524 29237535 chr3R 29239412 29239423 4 1890 25.0 11.5 18.2 0.2 1899 chr3R 29237524 exon CG11951 - chr3R 29238474 intron CG11951 - chr3R 29239423 exon CG31427 - chr3R_4_29235001 chr3R_29235001 RAL-492 2404 chr3R 29256264 29256300 chr3R 29256345 29256360 15 93 3.0 4.0 3.5 3.3 96 chr3R 29256264 intergenic CG45544 +,stg - chr3R 29256312 intergenic CG45544 + chr3R 29256360 intergenic CG45544 + chr3R_15_29255001 chr3R_29255001 RAL-492 2405 chr3R 29274322 29274336 chr3R 29274391 29274436 12 90 6.5 4.5 5.5 1.8 114 chr3R 29274322 intergenic not near genes chr3R 29274379 intergenic not near genes chr3R 29274436 intergenic not near genes chr3R_12_29270001 chr3R_29270001 RAL-492 2406 chr3R 29281688 29281735 chr3R 29281788 29281805 16 97 3.5 5.0 4.2 3.1 117 chr3R 29281688 intergenic not near genes chr3R 29281746 intergenic not near genes chr3R 29281805 intergenic not near genes chr3R_16_29280001 chr3R_29280001 RAL-492 2407 chr3R 29335386 29335417 chr3R 29335528 29335566 11 152 1.0 7.0 4.0 2.2 180 chr3R 29335386 intergenic not near genes chr3R 29335476 intergenic not near genes chr3R 29335566 intergenic not near genes chr3R_11_29335001 chr3R_29335001 RAL-492 2408 chr3R 29344098 29344148 chr3R 29344306 29344356 7 198 3.5 5.0 4.2 1.3 258 chr3R 29344098 intergenic not near genes chr3R 29344227 intergenic not near genes chr3R 29344356 intergenic not near genes chr3R_7_29340001 chr3R_29340001 RAL-492 2409 chr3R 29355936 29355989 chr3R 29356035 29356089 17 99 6.0 1.5 3.8 3.5 153 chr3R 29355936 intergenic CR45547 - chr3R 29356012 intergenic CR45547 - chr3R 29356089 intergenic CR45547 - chr3R_17_29355001 chr3R_29355001 RAL-492 2410 chr3R 29406605 29406639 chr3R 29407909 29407945 jockey 8 1303 5.5 9.5 7.5 0.9 1340 chr3R 29406605 intron Ptp99A + chr3R 29407275 intron Ptp99A + chr3R 29407945 intron Ptp99A + chr3R_8_29405001 chr3R_29405001 RAL-492 2411 chr3R 29429770 29429806 chr3R 29429866 29429885 8 88 2.0 2.0 2.0 2.7 115 chr3R 29429770 intron Ptp99A + chr3R 29429828 intron Ptp99A + chr3R 29429885 intron Ptp99A + chr3R_8_29425001 chr3R_29425001 RAL-492 2412 chr3R 29449339 29449389 chr3R 29449437 29449487 16 98 3.5 3.0 3.2 3.8 148 chr3R 29449339 intron Ptp99A + chr3R 29449413 intron Ptp99A + chr3R 29449487 intron Ptp99A + chr3R_16_29445001 chr3R_29445001 RAL-492 2413 chr3R 29472024 29472037 chr3R 29472106 29472138 7 95 4.5 3.5 4.0 1.4 114 chr3R 29472024 intron Ptp99A + chr3R 29472081 intron Ptp99A + chr3R 29472138 intron Ptp99A + chr3R_7_29470001 chr3R_29470001 RAL-492 2414 chr3R 29474415 29474451 chr3R 29474522 29474558 6 107 1.0 2.5 1.8 2.1 143 chr3R 29474415 intron Ptp99A + chr3R 29474486 intron Ptp99A + chr3R 29474558 intron Ptp99A + chr3R_6_29470001 chr3R_29470001 RAL-492 2415 chr3R 29539415 29539446 chr3R 29539506 29539537 8 94 2.0 0.0 1.0 4.0 122 chr3R 29539415 intergenic not near genes chr3R 29539476 intergenic not near genes chr3R 29539537 intergenic not near genes chr3R_8_29535001 chr3R_29535001 RAL-492 2416 chr3R 29563980 29563997 chr3R 29564070 29564093 5 94 0.0 9.5 4.8 0.9 113 chr3R 29563980 intron Dr + chr3R 29564036 intron Dr + chr3R 29564093 intron Dr + chr3R_5_29560001 chr3R_29560001 RAL-492 2417 chr3R 29566366 29566411 chr3R 29566462 29566508 15 96 3.0 2.0 2.5 4.3 142 chr3R 29566366 intergenic not near genes chr3R 29566437 intergenic not near genes chr3R 29566508 intergenic not near genes chr3R_15_29565001 chr3R_29565001 RAL-492 2418 chr3R 29590378 29590403 chr3R 29590474 29590516 5 100 2.5 4.5 3.5 1.1 138 chr3R 29590378 intron CG31041 - chr3R 29590447 intron CG31041 - chr3R 29590516 exon CG31041 - chr3R_5_29590001 chr3R_29590001 RAL-492 2419 chr3R 29606918 29606968 chr3R 29607015 29607066 16 97 2.5 1.5 2.0 5.3 148 chr3R 29606918 intron alph + chr3R 29606992 intron alph + chr3R 29607066 intron alph + chr3R_16_29605001 chr3R_29605001 RAL-492 2420 chr3R 29627555 29627577 chr3R 29627657 29627684 4 103 8.0 3.0 5.5 0.6 129 chr3R 29627555 intergenic not near genes chr3R 29627620 intergenic not near genes chr3R 29627684 intergenic not near genes chr3R_4_29625001 chr3R_29625001 RAL-492 2421 chr3R 29655640 29655654 chr3R 29655739 29655753 7 98 9.5 4.0 6.8 0.9 113 chr3R 29655640 intron Dop1R2 - chr3R 29655696 intron Dop1R2 - chr3R 29655753 intron Dop1R2 - chr3R_7_29655001 chr3R_29655001 RAL-492 2422 chr3R 29718128 29718176 chr3R 29718224 29718272 10 95 6.0 6.0 6.0 1.4 144 chr3R 29718128 intergenic not near genes chr3R 29718200 intergenic CG15506 + chr3R 29718272 intergenic CG15506 + chr3R_10_29715001 chr3R_29715001 RAL-492 2423 chr3R 29758927 29758967 chr3R 29759021 29759065 19 95 5.5 4.5 5.0 3.2 138 chr3R 29758927 3` UTR CR44953 - chr3R 29758996 3` UTR CR44953 - chr3R 29759065 intergenic CR44953 - chr3R_19_29755001 chr3R_29755001 RAL-492 2424 chr3R 29760344 29760387 chr3R 29761565 29761608 pogo 9 1221 2.0 3.0 2.5 2.6 1264 chr3R 29760344 intergenic not near genes chr3R 29760976 intergenic not near genes chr3R 29761608 intergenic not near genes chr3R_9_29760001 chr3R_29760001 RAL-492 2425 chr3R 29882004 29882050 chr3R 29891177 29891227 roo 14 9173 3.0 7.0 5.0 2.3 9223 chr3R 29882004 intron CG31038 + chr3R 29886616 intron CG31038 + chr3R 29891227 intron CG31038 + chr3R_14_29885001 chr3R_29885001 RAL-492 2426 chr3R 29950589 29950598 chr3R 29950652 29950695 5 78 7.5 1.5 4.5 0.9 106 chr3R 29950589 intergenic TkR99D - chr3R 29950642 intergenic TkR99D - chr3R 29950695 intergenic TkR99D - chr3R_5_29950001 chr3R_29950001 RAL-492 2427 chr3R 29963476 29963510 chr3R 29963577 29963632 13 115 4.0 3.0 3.5 2.9 156 chr3R 29963476 intron TkR99D - chr3R 29963554 intron TkR99D - chr3R 29963632 intron TkR99D - chr3R_13_29960001 chr3R_29960001 RAL-492 2428 chr3R 29982982 29983029 chr3R 29983130 29983177 12 145 3.5 3.0 3.2 2.9 195 chr3R 29982982 intergenic CG7896 + chr3R 29983080 intergenic CG7896 + chr3R 29983177 intergenic CG7896 + chr3R_12_29980001 chr3R_29980001 RAL-492 2429 chr3R 30026943 30026988 chr3R 30027041 30027086 10 95 5.0 0.0 2.5 2.9 143 chr3R 30026943 intron Axn + chr3R 30027014 intron Axn + chr3R 30027086 intron Axn + chr3R_10_30025001 chr3R_30025001 RAL-492 2430 chr3R 30050301 30050319 chr3R 30050409 30050446 7 124 1.5 2.0 1.8 2.5 145 chr3R 30050301 intron,intron CG15528 -,CR44046 + chr3R 30050374 intron,intron CG15528 -,CR44046 + chr3R 30050446 intron,intron CG15528 -,CR44046 + chr3R_7_30050001 chr3R_30050001 RAL-492 2431 chr3R 30084857 30084882 chr3R 30086329 30086331 hobo 13 1478 4.0 5.0 4.5 2.4 1474 chr3R 30084857 intron sima + chr3R 30085594 intron sima + chr3R 30086331 intron sima + chr3R_13_30085001 chr3R_30085001 RAL-492 2432 chr3R 30182739 30182788 chr3R 30182898 30182940 12 158 3.0 5.5 4.2 2.3 201 chr3R 30182739 intergenic not near genes chr3R 30182840 intergenic not near genes chr3R 30182940 intergenic not near genes chr3R_12_30180001 chr3R_30180001 RAL-492 2433 chr3R 30210664 30210672 chr3R 30210739 30210771 7 96 0.0 7.5 3.8 1.5 107 chr3R 30210664 intergenic CecA1 +,Anp + chr3R 30210718 intergenic CecA1 +,Anp + chr3R 30210771 intergenic CecA1 +,Anp + chr3R_7_30210001 chr3R_30210001 RAL-492 2434 chr3R 30238743 30238796 chr3R 30239927 30239958 1360 8 1175 0.0 2.0 1.0 4.0 1215 chr3R 30238743 intergenic not near genes chr3R 30239350 intergenic not near genes chr3R 30239958 intergenic not near genes chr3R_8_30235001 chr3R_30235001 RAL-492 2435 chr3R 30268394 30268429 chr3R 30268495 30268529 6 96 8.5 3.5 6.0 0.9 135 chr3R 30268394 intergenic not near genes chr3R 30268462 intergenic not near genes chr3R 30268529 intergenic not near genes chr3R_6_30265001 chr3R_30265001 RAL-492 2436 chr3R 30317306 30317357 chr3R 30324917 30324933 roo 6 7600 2.0 4.0 3.0 1.5 7627 chr3R 30317306 intron hdc + chr3R 30321120 intron hdc + chr3R 30324933 intron hdc + chr3R_6_30320001 chr3R_30320001 RAL-492 2437 chr3R 30396201 30396238 chr3R 30404487 30404523 roo 10 8285 5.0 7.5 6.2 1.4 8322 chr3R 30396201 intergenic not near genes chr3R 30400362 intergenic not near genes chr3R 30404523 5` UTR CR45570 + chr3R_10_30400001 chr3R_30400001 RAL-492 2438 chr3R 30456377 30456393 chr3R 30456476 30456492 8 99 1.0 6.0 3.5 1.8 115 chr3R 30456377 intergenic CG2224 - chr3R 30456434 intergenic CG2224 - chr3R 30456492 3` UTR CG2224 - chr3R_8_30455001 chr3R_30455001 RAL-492 2439 chr3R 30456395 30456419 chr3R 30456470 30456519 6 92 0.5 3.5 2.0 2.0 124 chr3R 30456395 intergenic CG2224 - chr3R 30456457 3` UTR CG2224 - chr3R 30456519 3` UTR CG2224 - chr3R_6_30455001 chr3R_30455001 RAL-492 2440 chr3R 30457995 30458044 chr3R 30458095 30458140 8 96 5.5 2.0 3.8 1.7 145 chr3R 30457995 intron CG2224 - chr3R 30458068 intron CG2224 - chr3R 30458140 intron CG2224 - chr3R_8_30455001 chr3R_30455001 RAL-492 2441 chr3R 30480453 30480504 chr3R 30482940 30482992 jockey 17 2479 7.0 5.0 6.0 2.4 2539 chr3R 30480453 intron PH4alphaEFB + chr3R 30481722 intron PH4alphaEFB + chr3R 30482992 intron PH4alphaEFB + chr3R_17_30480001 chr3R_30480001 RAL-492 2442 chr3R 30488103 30488120 chr3R 30488202 30488219 6 99 1.5 0.0 0.8 3.3 116 chr3R 30488103 intergenic Jon99Fii - chr3R 30488161 intergenic Jon99Fii - chr3R 30488219 intergenic Jon99Fii - chr3R_6_30485001 chr3R_30485001 RAL-492 2443 chr3R 30548319 30548328 chr3R 30548417 30548426 6 98 4.0 7.0 5.5 0.9 107 chr3R 30548319 intron tmod + chr3R 30548372 intron tmod + chr3R 30548426 intron tmod + chr3R_6_30545001 chr3R_30545001 RAL-492 2444 chr3R 30554400 30554424 chr3R 30554474 30554520 4 90 4.0 1.0 2.5 1.1 120 chr3R 30554400 intron tmod + chr3R 30554460 intron tmod + chr3R 30554520 intron tmod + chr3R_4_30550001 chr3R_30550001 RAL-492 2445 chr3R 30566726 30566774 chr3R 30566840 30566881 15 113 4.0 4.0 4.0 3.0 155 chr3R 30566726 intron tmod + chr3R 30566804 intron tmod + chr3R 30566881 intron tmod + chr3R_15_30565001 chr3R_30565001 RAL-492 2446 chr3R 30573815 30573848 chr3R 30573934 30573966 8 118 6.0 5.5 5.8 1.2 151 chr3R 30573815 intron tmod + chr3R 30573890 intron tmod + chr3R 30573966 intron tmod + chr3R_8_30570001 chr3R_30570001 RAL-492 2447 chr3R 30592502 30592536 chr3R 30592615 30592655 12 120 5.5 5.5 5.5 1.8 153 chr3R 30592502 intergenic CG2246 - chr3R 30592578 intergenic CG2246 - chr3R 30592655 intergenic CG2246 - chr3R_12_30590001 chr3R_30590001 RAL-492 2448 chr3R 30627598 30627621 chr3R 30627682 30627688 6 84 10.0 8.0 9.0 0.6 90 chr3R 30627598 3` UTR CG2267 - chr3R 30627643 exon CG2267 - chr3R 30627688 exon CG2267 - chr3R_6_30625001 chr3R_30625001 RAL-492 2449 chr3R 30627624 30627638 chr3R 30627681 30627720 11 85 5.5 8.0 6.8 1.4 96 chr3R 30627624 exon CG2267 - chr3R 30627672 exon CG2267 - chr3R 30627720 exon CG2267 - chr3R_11_30625001 chr3R_30625001 RAL-492 2450 chr3R 30679505 30679552 chr3R 30686990 30687041 blood 14 7486 1.5 5.0 3.2 3.3 7536 chr3R 30679505 intergenic not near genes chr3R 30683273 intergenic not near genes chr3R 30687041 intergenic not near genes chr3R_14_30680001 chr3R_30680001 RAL-492 2451 chr3R 30818791 30818829 chr3R 30820375 30820414 1360 12 1585 9.5 3.5 6.5 1.6 1623 chr3R 30818791 intron cindr + chr3R 30819602 intron cindr + chr3R 30820414 intron cindr + chr3R_12_30815001 chr3R_30815001 RAL-492 2452 chr3R 30859387 30859421 chr3R 30859485 30859519 14 98 4.0 1.5 2.8 3.7 132 chr3R 30859387 intergenic not near genes chr3R 30859453 intergenic not near genes chr3R 30859519 intergenic not near genes chr3R_14_30855001 chr3R_30855001 RAL-492 2453 chr3R 30868701 30868750 chr3R 30868797 30868846 16 94 1.5 3.5 2.5 4.6 145 chr3R 30868701 3` UTR Cpr100A + chr3R 30868774 3` UTR Cpr100A + chr3R 30868846 3` UTR Cpr100A + chr3R_16_30865001 chr3R_30865001 RAL-492 2454 chr3R 30948056 30948109 chr3R 30948265 30948319 13 203 2.5 4.0 3.2 3.1 263 chr3R 30948056 intergenic not near genes chr3R 30948188 intergenic not near genes chr3R 30948319 intergenic not near genes chr3R_13_30945001 chr3R_30945001 RAL-492 2455 chr3R 30973112 30973167 chr3R 30973292 30973295 15 177 1.5 1.5 1.5 6.0 183 chr3R 30973112 intron 5-HT7 - chr3R 30973204 intron 5-HT7 - chr3R 30973295 intron 5-HT7 - chr3R_15_30970001 chr3R_30970001 RAL-492 2456 chr3R 30982587 30982615 chr3R 30982688 30982727 5 93 4.0 1.5 2.8 1.3 140 chr3R 30982587 intron 5-HT7 - chr3R 30982657 intron 5-HT7 - chr3R 30982727 intron 5-HT7 - chr3R_5_30980001 chr3R_30980001 RAL-492 2457 chr3R 30996621 30996668 chr3R 30996865 30996912 16 240 3.5 2.5 3.0 4.0 291 chr3R 30996621 intron 5-HT7 - chr3R 30996766 intron 5-HT7 - chr3R 30996912 intron 5-HT7 - chr3R_16_30995001 chr3R_30995001 RAL-492 2458 chr3R 31026472 31026494 chr3R 31026572 31026595 7 99 6.0 6.0 6.0 1.0 123 chr3R 31026472 intergenic not near genes chr3R 31026534 intergenic not near genes chr3R 31026595 intergenic not near genes chr3R_7_31025001 chr3R_31025001 RAL-492 2459 chr3R 31026495 31026523 chr3R 31026569 31026620 11 89 3.5 5.0 4.2 2.1 125 chr3R 31026495 intergenic not near genes chr3R 31026558 intergenic not near genes chr3R 31026620 intergenic not near genes chr3R_11_31025001 chr3R_31025001 RAL-492 2460 chr3R 31073323 31073337 chr3R 31073424 31073438 4 98 6.0 6.0 6.0 0.6 115 chr3R 31073323 exon Sox100B + chr3R 31073380 intron Sox100B + chr3R 31073438 intron Sox100B + chr3R_4_31070001 chr3R_31070001 RAL-492 2461 chr3R 31074217 31074259 chr3R 31081835 31081876 springer 10 7617 6.0 4.5 5.2 1.6 7659 chr3R 31074217 intron Sox100B + chr3R 31078046 intron Sox100B + chr3R 31081876 intron Sox100B + chr3R_10_31075001 chr3R_31075001 RAL-492 2462 chr3R 31084894 31084934 chr3R 31084990 31085030 5 96 2.5 3.5 3.0 1.2 136 chr3R 31084894 intergenic not near genes chr3R 31084962 intergenic not near genes chr3R 31085030 intergenic not near genes chr3R_5_31080001 chr3R_31080001 RAL-492 2463 chr3R 31137137 31137184 chr3R 31137237 31137284 7 99 2.5 4.5 3.5 1.6 147 chr3R 31137137 intron Gycbeta100B + chr3R 31137210 intron Gycbeta100B + chr3R 31137284 intron Gycbeta100B + chr3R_7_31135001 chr3R_31135001 RAL-492 2464 chr3R 31146729 31146779 chr3R 31146827 31146877 21 95 5.0 8.0 6.5 2.8 148 chr3R 31146729 intron Gycbeta100B + chr3R 31146803 intron Gycbeta100B + chr3R 31146877 intron Gycbeta100B + chr3R_21_31145001 chr3R_31145001 RAL-492 2465 chr3R 31279351 31279409 chr3R 31285562 31285619 diver 15 6204 4.5 4.0 4.2 2.9 6268 chr3R 31279351 intergenic not near genes chr3R 31282485 intergenic not near genes chr3R 31285619 intergenic not near genes chr3R_15_31280001 chr3R_31280001 RAL-492 2466 chr3R 31412688 31412736 chr3R 31412800 31412849 8 112 1.0 2.5 1.8 2.9 161 chr3R 31412688 intron Gprk2 + chr3R 31412768 intron Gprk2 + chr3R 31412849 intron Gprk2 + chr3R_8_31410001 chr3R_31410001 RAL-492 2467 chr3R 31413075 31413119 chr3R 31418288 31418307 copia 20 5208 2.5 1.0 1.8 7.1 5232 chr3R 31413075 intron Gprk2 + chr3R 31415691 intron Gprk2 + chr3R 31418307 intron Gprk2 + chr3R_20_31415001 chr3R_31415001 RAL-492 2468 chr3R 31426865 31426910 chr3R 31426968 31427022 15 111 1.5 3.0 2.2 4.7 157 chr3R 31426865 intron Gprk2 + chr3R 31426944 intron Gprk2 + chr3R 31427022 intron Gprk2 + chr3R_15_31425001 chr3R_31425001 RAL-492 2469 chr3R 31435345 31435374 chr3R 31435517 31435546 16 171 8.0 3.5 5.8 2.4 201 chr3R 31435345 intron Gprk2 + chr3R 31435446 intron Gprk2 + chr3R 31435546 intron Gprk2 + chr3R_16_31435001 chr3R_31435001 RAL-492 2470 chr3R 31435375 31435388 chr3R 31435515 31435560 4 161 5.0 3.5 4.2 0.8 185 chr3R 31435375 intron Gprk2 + chr3R 31435468 intron Gprk2 + chr3R 31435560 intron Gprk2 + chr3R_4_31435001 chr3R_31435001 RAL-492 2471 chr3R 31486129 31486180 chr3R 31486230 31486263 9 94 6.5 4.0 5.2 1.5 134 chr3R 31486129 intergenic not near genes chr3R 31486196 intergenic not near genes chr3R 31486263 intergenic not near genes chr3R_9_31485001 chr3R_31485001 RAL-492 2472 chr3R 31600141 31600159 chr3R 31600210 31600260 11 92 3.0 3.5 3.2 2.6 119 chr3R 31600141 intron CycG - chr3R 31600200 intron CycG - chr3R 31600260 intron CycG - chr3R_11_31600001 chr3R_31600001 RAL-492 2473 chr3R 31627677 31627707 chr3R 31627756 31627781 7 76 2.0 3.5 2.8 1.8 104 chr3R 31627677 intron kek6 + chr3R 31627729 intron kek6 + chr3R 31627781 intron kek6 + chr3R_7_31625001 chr3R_31625001 RAL-492 2474 chr3R 31630045 31630085 chr3R 31630170 31630210 15 124 2.5 2.0 2.2 4.7 165 chr3R 31630045 intron kek6 + chr3R 31630128 intron kek6 + chr3R 31630210 intron kek6 + chr3R_15_31630001 chr3R_31630001 RAL-492 2475 chr3R 31691518 31691561 chr3R 31696304 31696330 Doc 16 4783 3.5 10.0 6.8 2.1 4812 chr3R 31691518 intergenic not near genes chr3R 31693924 intergenic not near genes chr3R 31696330 intergenic not near genes chr3R_16_31690001 chr3R_31690001 RAL-492 2476 chr3R 31758309 31758358 chr3R 31758655 31758700 18 341 3.5 6.0 4.8 3.1 391 chr3R 31758309 5` UTR CG2187 - chr3R 31758504 5` UTR CG2187 - chr3R 31758700 intergenic CR44263 +,CG2187 - chr3R_18_31755001 chr3R_31755001 RAL-492 2477 chr3R 31808596 31808637 chr3R 31808692 31808733 12 95 4.0 4.0 4.0 2.4 137 chr3R 31808596 intron CG11576 - chr3R 31808664 intron CG11576 - chr3R 31808733 intron CG11576 - chr3R_12_31805001 chr3R_31805001 RAL-492 2478 chr3R 31819293 31819343 chr3R 31819431 31819456 11 129 3.5 1.5 2.5 3.1 163 chr3R 31819293 intron RhoGAP100F + chr3R 31819374 intron RhoGAP100F + chr3R 31819456 intron RhoGAP100F + chr3R_11_31815001 chr3R_31815001 RAL-492 2479 chr3R 31827249 31827294 chr3R 31827347 31827372 11 92 5.0 3.5 4.2 2.1 123 chr3R 31827249 intron RhoGAP100F + chr3R 31827310 intron RhoGAP100F + chr3R 31827372 intron RhoGAP100F + chr3R_11_31825001 chr3R_31825001 RAL-492 2480 chr3R 31858195 31858205 chr3R 31858318 31858328 4 123 0.0 5.0 2.5 1.1 133 chr3R 31858195 intron heph - chr3R 31858262 intron heph - chr3R 31858328 intron heph - chr3R_4_31855001 chr3R_31855001 RAL-492 2481 chr3R 31911667 31911713 chr3R 31911773 31911798 14 98 0.0 3.0 1.5 5.6 131 chr3R 31911667 intron heph - chr3R 31911732 intron heph - chr3R 31911798 intron heph - chr3R_14_31910001 chr3R_31910001 RAL-492 2482 chr3R 31929462 31929484 chr3R 31930666 31930709 13 1208 9.5 33.0 21.2 0.6 1247 chr3R 31929462 intron heph - chr3R 31930086 intron heph - chr3R 31930709 intron heph - chr3R_13_31930001 chr3R_31930001 RAL-492 2483 chr3R 31931176 31931213 chr3R 31931279 31931315 7 102 4.0 4.0 4.0 1.4 139 chr3R 31931176 intron heph - chr3R 31931246 intron heph - chr3R 31931315 intron heph - chr3R_7_31930001 chr3R_31930001 RAL-492 2484 chr3R 31946004 31946051 chr3R 31946112 31946155 11 101 3.0 8.0 5.5 1.7 151 chr3R 31946004 intron heph - chr3R 31946080 intron heph - chr3R 31946155 intron heph - chr3R_11_31945001 chr3R_31945001 RAL-492 2485 chr3R 31954410 31954456 chr3R 31954508 31954563 16 103 1.5 5.0 3.2 3.8 153 chr3R 31954410 intron heph - chr3R 31954486 intron heph - chr3R 31954563 intron heph - chr3R_16_31950001 chr3R_31950001 RAL-492 2486 chr3R 31961327 31961365 chr3R 31961429 31961466 8 91 4.0 9.0 6.5 1.1 139 chr3R 31961327 intron heph - chr3R 31961396 intron heph - chr3R 31961466 intron heph - chr3R_8_31960001 chr3R_31960001 RAL-492 2487 chr3R 31997973 31998022 chr3R 32005463 32005511 blood 11 7488 0.0 5.0 2.5 3.1 7538 chr3R 31997973 intron heph - chr3R 32001742 intron heph - chr3R 32005511 intron heph - chr3R_11_32000001 chr3R_32000001 RAL-492 2488 chr4 76482 76507 chr4 81945 81946 I-element 7 5458 9.0 3.5 6.2 1.0 5464 chr4 76482 intron pan + chr4 79214 intron pan + chr4 81946 intron pan + chr4_7_75001 chr4_75001 RAL-492 2489 chr4 257396 257433 chr4 257586 257623 12 187 2.0 4.0 3.0 3.0 227 chr4 257396 exon RhoGAP102A + chr4 257510 intron RhoGAP102A + chr4 257623 intron RhoGAP102A + chr4_12_255001 chr4_255001 RAL-492 2490 chr4 671592 671628 chr4 680190 680231 Tirant 6 8600 6.0 8.0 7.0 0.8 8639 chr4 671592 intron CG11360 + chr4 675912 intron CG11360 + chr4 680231 intron CG11360 + chr4_6_675001 chr4_675001 RAL-492 2491 chr4 694888 694935 chr4 694989 695036 9 99 3.5 1.0 2.2 2.8 148 chr4 694888 intron myo - chr4 694962 intron myo - chr4 695036 intron myo - chr4_9_690001 chr4_690001 RAL-492 2492 chr4 959605 959639 chr4 959804 959838 8 198 4.5 3.0 3.8 1.7 233 chr4 959605 intergenic CR44030 +,CR45201 - chr4 959722 5` UTR CR44030 + chr4 959838 5` UTR CR44030 + chr4_8_955001 chr4_955001 RAL-492 2493 chrX 295839 295873 chrX 303479 303512 412 5 7640 2.5 7.5 5.0 0.8 7673 chrX 295839 intron CG3777 + chrX 299676 intron CG3777 + chrX 303512 intron CG3777 + chrX_5_295001 chrX_295001 RAL-492 2494 chrX 318456 318498 chrX 323561 323604 flea 10 5105 2.5 4.0 3.2 2.4 5148 chrX 318456 intron,intron CG3777 +,CG32816 - chrX 321030 intron,intron CG3777 +,CG32816 - chrX 323604 intron,intron CG3777 +,CG32816 - chrX_10_320001 chrX_320001 RAL-492 2495 chrX 428408 428451 chrX 434604 434656 3S18 15 6203 3.5 2.0 2.8 3.9 6248 chrX 428408 intron CG32816 - chrX 431532 intron CG32816 - chrX 434656 intron CG32816 - chrX_15_430001 chrX_430001 RAL-492 2496 chrX 550741 550788 chrX 551340 551387 10 589 4.5 6.0 5.2 1.6 646 chrX 550741 intron Appl + chrX 551064 intron Appl + chrX 551387 intron Appl + chrX_10_550001 chrX_550001 RAL-492 2497 chrX 551419 551448 chrX 559000 559030 412 9 7581 6.0 6.0 6.0 1.3 7611 chrX 551419 intron Appl + chrX 555224 intron Appl + chrX 559030 intron Appl + chrX_9_555001 chrX_555001 RAL-492 2498 chrX 726065 726115 chrX 726169 726209 12 97 2.5 6.5 4.5 2.2 144 chrX 726065 intron sdk + chrX 726137 intron sdk + chrX 726209 intron sdk + chrX_12_725001 chrX_725001 RAL-492 2499 chrX 802279 802311 chrX 802365 802407 10 88 4.0 7.0 5.5 1.5 128 chrX 802279 exon CG13359 - chrX 802343 exon CG13359 - chrX 802407 exon CG13359 - chrX_10_800001 chrX_800001 RAL-492 2500 chrX 802312 802318 chrX 802364 802398 4 74 2.5 6.5 4.5 0.7 86 chrX 802312 exon CG13359 - chrX 802355 exon CG13359 - chrX 802398 exon CG13359 - chrX_4_800001 chrX_800001 RAL-492 2501 chrX 812274 812281 chrX 817903 817931 297 4 5644 3.0 3.0 3.0 1.0 5657 chrX 812274 intron CG43867 - chrX 815102 intron CG43867 - chrX 817931 intron CG43867 - chrX_4_815001 chrX_815001 RAL-492 2502 chrX 827587 827630 chrX 835399 835437 roo 12 7808 5.5 3.5 4.5 2.2 7850 chrX 827587 intron CG43867 - chrX 831512 intron CG43867 - chrX 835437 intron CG43867 - chrX_12_830001 chrX_830001 RAL-492 2503 chrX 906687 906734 chrX 908496 908508 S-element 15 1805 3.5 8.0 5.8 2.2 1821 chrX 906687 intron CG43867 - chrX 907598 intron CG43867 - chrX 908508 intron CG43867 - chrX_15_905001 chrX_905001 RAL-492 2504 chrX 990201 990244 chrX 990302 990345 10 93 3.0 3.5 3.2 2.4 144 chrX 990201 intergenic CG18823 + chrX 990273 intergenic CG18823 + chrX 990345 intergenic CG18823 + chrX_10_990001 chrX_990001 RAL-492 2505 chrX 1053119 1053120 chrX 16983076 16983077 7 15929957 7.5 8.0 7.8 0.8 15929958 chrX 1053119 intron CR44779 + chrX 9018098 intron,intron rdgA +,CR43836 - chrX 16983077 intron CG45002 - chrX_7_9015001 chrX_9015001 RAL-492 2506 chrX 1253733 1253764 chrX 1253822 1253866 8 99 2.0 6.5 4.2 1.5 133 chrX 1253733 intron Atf3 - chrX 1253800 intron Atf3 - chrX 1253866 intron Atf3 - chrX_8_1250001 chrX_1250001 RAL-492 2507 chrX 1357775 1357795 chrX 1367965 1367984 Doc 7 10189 8.0 6.0 7.0 0.9 10209 chrX 1357775 intergenic png - chrX 1362880 intergenic not near genes chrX 1367984 intergenic not near genes chrX_7_1360001 chrX_1360001 RAL-492 2508 chrX 1518023 1518071 chrX 1523445 1523491 jockey 16 5416 3.5 8.0 5.8 2.4 5468 chrX 1518023 intergenic inc + chrX 1520757 intergenic not near genes chrX 1523491 intergenic not near genes chrX_16_1520001 chrX_1520001 RAL-492 2509 chrX 1674837 1674850 chrX 1674933 1674940 4 94 10.0 2.0 6.0 0.6 103 chrX 1674837 3` UTR CG32809 - chrX 1674888 3` UTR CG32809 - chrX 1674940 3` UTR CG32809 - chrX_4_1670001 chrX_1670001 RAL-492 2510 chrX 1930516 1930562 chrX 1938107 1938108 opus 6 7582 0.5 2.0 1.2 2.7 7592 chrX 1930516 3` UTR CG11596 + chrX 1934312 intergenic not near genes chrX 1938108 3` UTR CG3857 - chrX_6_1930001 chrX_1930001 RAL-492 2511 chrX 2069355 2069402 chrX 2069475 2069521 9 119 1.0 2.5 1.8 3.2 166 chrX 2069355 intron,exon CG4199 -,CG4194 + chrX 2069438 intron,3` UTR CG4199 -,CG4194 + chrX 2069521 intron,3` UTR CG4199 -,CG4194 + chrX_9_2065001 chrX_2065001 RAL-492 2512 chrX 2098585 2098635 chrX 2098684 2098697 9 88 5.0 9.0 7.0 1.1 112 chrX 2098585 intron csw + chrX 2098641 intron csw + chrX 2098697 intron csw + chrX_9_2095001 chrX_2095001 RAL-492 2513 chrX 2188637 2188645 chrX 2188739 2188747 4 102 6.0 3.0 4.5 0.7 110 chrX 2188637 3` UTR CG3457 + chrX 2188692 3` UTR CG3457 + chrX 2188747 3` UTR CG3457 + chrX_4_2185001 chrX_2185001 RAL-492 2514 chrX 2188654 2188676 chrX 2188735 2188778 6 97 1.5 2.0 1.8 2.1 124 chrX 2188654 3` UTR CG3457 + chrX 2188716 3` UTR CG3457 + chrX 2188778 3` UTR CG3457 + chrX_6_2185001 chrX_2185001 RAL-492 2515 chrX 2254449 2254457 chrX 2254545 2254550 4 94 12.5 6.0 9.2 0.4 101 chrX 2254449 3` UTR CG3078 - chrX 2254500 3` UTR CG3078 - chrX 2254550 3` UTR CG3078 - chrX_4_2250001 chrX_2250001 RAL-492 2516 chrX 2399833 2399871 chrX 2408188 2408213 roo 8 8342 3.0 0.5 1.8 2.9 8380 chrX 2399833 intergenic not near genes chrX 2404023 intergenic not near genes chrX 2408213 intergenic not near genes chrX_8_2400001 chrX_2400001 RAL-492 2517 chrX 2429651 2429667 chrX 2429752 2429768 4 100 0.0 3.5 1.8 1.4 117 chrX 2429651 intergenic not near genes chrX 2429710 intergenic not near genes chrX 2429768 intergenic not near genes chrX_4_2425001 chrX_2425001 RAL-492 2518 chrX 2460171 2460195 chrX 2460593 2460614 5 425 3.5 4.0 3.8 1.0 443 chrX 2460171 intron boi - chrX 2460392 intron boi - chrX 2460614 intron boi - chrX_5_2460001 chrX_2460001 RAL-492 2519 chrX 2578802 2578823 chrX 2578926 2578947 8 124 4.0 5.5 4.8 1.4 145 chrX 2578802 intergenic Pdfr +,Vha36-3 - chrX 2578874 intergenic Vha36-3 -,Pdfr + chrX 2578947 intergenic Vha36-3 -,Pdfr + chrX_8_2575001 chrX_2575001 RAL-492 2520 chrX 2578827 2578839 chrX 2578921 2578963 8 117 3.5 3.5 3.5 1.8 136 chrX 2578827 intergenic Pdfr +,Vha36-3 - chrX 2578895 intergenic Vha36-3 -,Pdfr + chrX 2578963 intergenic Vha36-3 -,Pdfr + chrX_8_2575001 chrX_2575001 RAL-492 2521 chrX 2664381 2664404 chrX 2665547 2665566 1360 5 1165 3.5 8.5 6.0 0.7 1185 chrX 2664381 intron sgg + chrX 2664974 intron sgg + chrX 2665566 intron sgg + chrX_5_2660001 chrX_2660001 RAL-492 2522 chrX 2684327 2684381 chrX 2684491 2684544 15 161 3.0 2.5 2.8 3.9 217 chrX 2684327 intergenic CR44470 - chrX 2684436 intergenic not near genes chrX 2684544 intergenic not near genes chrX_15_2680001 chrX_2680001 RAL-492 2523 chrX 2714792 2714833 chrX 2714909 2714954 7 115 5.0 1.5 3.2 1.7 162 chrX 2714792 5` UTR CG2694 + chrX 2714873 5` UTR CG2694 + chrX 2714954 exon CG2694 + chrX_7_2710001 chrX_2710001 RAL-492 2524 chrX 2844883 2844933 chrX 2852313 2852363 mdg1 11 7430 1.5 5.0 3.2 2.6 7480 chrX 2844883 intron kirre + chrX 2848623 intron kirre + chrX 2852363 intron kirre + chrX_11_2845001 chrX_2845001 RAL-492 2525 chrX 2888095 2888140 chrX 2888191 2888237 11 91 4.0 5.0 4.5 2.0 142 chrX 2888095 intron kirre + chrX 2888166 intron kirre + chrX 2888237 intron kirre + chrX_11_2885001 chrX_2885001 RAL-492 2526 chrX 3031139 3031189 chrX 3031240 3031263 11 94 1.5 1.5 1.5 4.4 124 chrX 3031139 intron kirre + chrX 3031201 intron kirre + chrX 3031263 intron kirre + chrX_11_3030001 chrX_3030001 RAL-492 2527 chrX 3058022 3058050 chrX 3058283 3058309 pogo 6 260 2.5 2.5 2.5 1.7 287 chrX 3058022 intron kirre + chrX 3058166 intron kirre + chrX 3058309 intron kirre + chrX_6_3055001 chrX_3055001 RAL-492 2528 chrX 3075623 3075657 chrX 3080949 3080983 Transpac 12 5325 5.5 6.5 6.0 1.7 5360 chrX 3075623 intron kirre + chrX 3078303 intron kirre + chrX 3080983 intron kirre + chrX_12_3075001 chrX_3075001 RAL-492 2529 chrX 3092842 3092892 chrX 3092989 3093041 12 142 3.5 1.5 2.5 3.4 199 chrX 3092842 intron kirre + chrX 3092942 intron kirre + chrX 3093041 intron kirre + chrX_12_3090001 chrX_3090001 RAL-492 2530 chrX 3109425 3109473 chrX 3109521 3109569 11 95 1.5 3.5 2.5 3.1 144 chrX 3109425 intron kirre + chrX 3109497 intron kirre + chrX 3109569 intron kirre + chrX_11_3105001 chrX_3105001 RAL-492 2531 chrX 3190031 3190070 chrX 3190116 3190168 9 93 3.5 2.5 3.0 2.2 137 chrX 3190031 5` UTR dnc + chrX 3190100 5` UTR dnc + chrX 3190168 5` UTR dnc + chrX_9_3190001 chrX_3190001 RAL-492 2532 chrX 3306329 3306373 chrX 3306430 3306475 5 102 2.5 3.5 3.0 1.2 146 chrX 3306329 intron dnc + chrX 3306402 intron dnc + chrX 3306475 intron dnc + chrX_5_3305001 chrX_3305001 RAL-492 2533 chrX 3516822 3516851 chrX 3516925 3516932 7 109 1.0 3.0 2.0 2.3 110 chrX 3516822 intron,intron CR44999 +,CG32791 - chrX 3516877 intron,intron CR44999 +,CG32791 - chrX 3516932 intron,intron CR44999 +,CG32791 - chrX_7_3515001 chrX_3515001 RAL-492 2534 chrX 3597091 3597112 chrX 3597199 3597220 4 108 1.0 4.5 2.8 1.1 129 chrX 3597091 intron AstA-R1 + chrX 3597156 intron AstA-R1 + chrX 3597220 intron AstA-R1 + chrX_4_3595001 chrX_3595001 RAL-492 2535 chrX 3597530 3597576 chrX 3619718 3619725 roo 11 22183 4.5 1.0 2.8 2.9 22195 chrX 3597530 intron AstA-R1 + chrX 3608628 intron AstA-R1 + chrX 3619725 intron AstA-R1 + chrX_11_3605001 chrX_3605001 RAL-492 2536 chrX 3703689 3703744 chrX 3703797 3703813 5 96 1.0 3.5 2.2 1.6 124 chrX 3703689 intergenic CR45102 + chrX 3703751 intergenic CR45102 + chrX 3703813 intergenic not near genes chrX_5_3700001 chrX_3700001 RAL-492 2537 chrX 3713089 3713136 chrX 3713211 3713264 8 128 0.5 1.0 0.8 4.4 175 chrX 3713089 intron Rala - chrX 3713176 intron Rala - chrX 3713264 intron Rala - chrX_8_3710001 chrX_3710001 RAL-492 2538 chrX 3752386 3752399 chrX 3764755 3764768 17.6 4 12369 9.5 2.5 6.0 0.6 12382 chrX 3752386 intron tlk + chrX 3758577 intron tlk + chrX 3764768 intron tlk + chrX_4_3755001 chrX_3755001 RAL-492 2539 chrX 3842300 3842350 chrX 3842561 3842611 pogo 18 260 2.0 3.5 2.8 4.7 311 chrX 3842300 intron ec + chrX 3842456 intron ec + chrX 3842611 intron ec + chrX_18_3840001 chrX_3840001 RAL-492 2540 chrX 3862798 3862843 chrX 3862901 3862947 9 104 3.0 2.5 2.8 2.4 149 chrX 3862798 intergenic yin - chrX 3862872 intergenic yin - chrX 3862947 intergenic yin - chrX_9_3860001 chrX_3860001 RAL-492 2541 chrX 3866086 3866123 chrX 3866184 3866219 16 95 2.5 1.0 1.8 5.7 133 chrX 3866086 intron yin - chrX 3866152 intron yin - chrX 3866219 intron yin - chrX_16_3865001 chrX_3865001 RAL-492 2542 chrX 3950655 3950710 chrX 3950987 3951037 17 331 4.0 4.0 4.0 3.4 382 chrX 3950655 intron Vap-33A + chrX 3950846 intron Vap-33A + chrX 3951037 intron Vap-33A + chrX_17_3950001 chrX_3950001 RAL-492 2543 chrX 3986844 3986892 chrX 3994497 3994545 412 10 7651 3.5 3.5 3.5 2.2 7701 chrX 3986844 intergenic not near genes chrX 3990694 intergenic not near genes chrX 3994545 intergenic not near genes chrX_10_3990001 chrX_3990001 RAL-492 2544 chrX 4029510 4029558 chrX 4029720 4029768 4 209 3.5 3.0 3.2 1.0 258 chrX 4029510 intergenic not near genes chrX 4029639 intergenic not near genes chrX 4029768 intergenic not near genes chrX_4_4025001 chrX_4025001 RAL-492 2545 chrX 4046335 4046357 chrX 4046409 4046461 6 88 4.0 2.0 3.0 1.5 126 chrX 4046335 intergenic not near genes chrX 4046398 intergenic not near genes chrX 4046461 intergenic not near genes chrX_6_4045001 chrX_4045001 RAL-492 2546 chrX 4047468 4047504 chrX 4047599 4047604 9 127 3.0 2.5 2.8 2.4 136 chrX 4047468 intergenic CR45482 - chrX 4047536 intergenic CR45482 - chrX 4047604 3` UTR CR45482 - chrX_9_4045001 chrX_4045001 RAL-492 2547 chrX 4048492 4048523 chrX 4048582 4048619 5 95 4.5 1.0 2.8 1.3 127 chrX 4048492 3` UTR CR45482 - chrX 4048556 3` UTR CR45482 - chrX 4048619 3` UTR CR45482 - chrX_5_4045001 chrX_4045001 RAL-492 2548 chrX 4091400 4091422 chrX 4091502 4091526 10 103 10.5 3.5 7.0 1.2 126 chrX 4091400 3` UTR CG43689 + chrX 4091463 3` UTR CG43689 + chrX 4091526 3` UTR CG43689 + chrX_10_4090001 chrX_4090001 RAL-492 2549 chrX 4091423 4091452 chrX 4091500 4091557 11 99 5.0 3.5 4.2 2.1 134 chrX 4091423 3` UTR CG43689 + chrX 4091490 3` UTR CG43689 + chrX 4091557 3` UTR CG43689 + chrX_11_4090001 chrX_4090001 RAL-492 2550 chrX 4101863 4101898 chrX 4101945 4101998 5 94 1.5 5.5 3.5 1.1 135 chrX 4101863 exon CG15375 + chrX 4101930 exon CG15375 + chrX 4101998 exon CG15375 + chrX_5_4100001 chrX_4100001 RAL-492 2551 chrX 4157882 4157918 chrX 4164949 4164990 297 8 7072 4.5 1.0 2.8 2.1 7108 chrX 4157882 intron Fas2 - chrX 4161436 intron Fas2 - chrX 4164990 intron Fas2 - chrX_8_4160001 chrX_4160001 RAL-492 2552 chrX 4324374 4324414 chrX 4324470 4324511 8 95 1.0 1.5 1.2 3.6 137 chrX 4324374 intron norpA + chrX 4324442 intron norpA + chrX 4324511 intron norpA + chrX_8_4320001 chrX_4320001 RAL-492 2553 chrX 4358070 4358108 chrX 4358192 4358230 8 122 3.0 0.0 1.5 3.2 160 chrX 4358070 intron norpA + chrX 4358150 intron norpA + chrX 4358230 intron norpA + chrX_8_4355001 chrX_4355001 RAL-492 2554 chrX 4361421 4361454 chrX 4361520 4361553 7 99 5.0 3.5 4.2 1.3 132 chrX 4361421 intron norpA + chrX 4361487 intron norpA + chrX 4361553 intron norpA + chrX_7_4360001 chrX_4360001 RAL-492 2555 chrX 4382474 4382480 chrX 4382910 4382917 4 437 0.0 1.0 0.5 2.7 443 chrX 4382474 intergenic CG12688 + chrX 4382696 intergenic CG12688 + chrX 4382917 intergenic CG12688 + chrX_4_4380001 chrX_4380001 RAL-492 2556 chrX 4396958 4397009 chrX 4397063 4397092 17 101 4.5 3.0 3.8 3.5 134 chrX 4396958 intron CR32773 - chrX 4397025 intron CR32773 - chrX 4397092 intron CR32773 - chrX_17_4395001 chrX_4395001 RAL-492 2557 chrX 4700376 4700417 chrX 4700734 4700777 jockey 8 361 0.5 1.0 0.8 4.4 401 chrX 4700376 3` UTR ctp + chrX 4700576 3` UTR ctp + chrX 4700777 3` UTR ctp + chrX_8_4700001 chrX_4700001 RAL-492 2558 chrX 4723568 4723577 chrX 4723659 4723676 6 97 10.0 4.5 7.2 0.7 108 chrX 4723568 intron Proc-R + chrX 4723622 intron Proc-R + chrX 4723676 intron Proc-R + chrX_6_4720001 chrX_4720001 RAL-492 2559 chrX 4731802 4731813 chrX 4736915 4736915 jockey 5 5110 3.0 4.0 3.5 1.1 5113 chrX 4731802 intergenic not near genes chrX 4734358 intergenic not near genes chrX 4736915 intergenic not near genes chrX_5_4730001 chrX_4730001 RAL-492 2560 chrX 4763250 4763278 chrX 4763739 4763785 Stalker4 6 504 3.5 1.5 2.5 1.7 535 chrX 4763250 intergenic not near genes chrX 4763518 intergenic not near genes chrX 4763785 intergenic not near genes chrX_6_4760001 chrX_4760001 RAL-492 2561 chrX 4792364 4792399 chrX 4792817 4792852 jockey 8 451 3.0 4.0 3.5 1.8 488 chrX 4792364 intergenic not near genes chrX 4792608 intergenic not near genes chrX 4792852 intergenic not near genes chrX_8_4790001 chrX_4790001 RAL-492 2562 chrX 4827991 4827997 chrX 4835339 4835356 Stalker4 5 7374 4.0 3.0 3.5 1.1 7365 chrX 4827991 intergenic not near genes chrX 4831674 intergenic not near genes chrX 4835356 intergenic not near genes chrX_5_4830001 chrX_4830001 RAL-492 2563 chrX 4885777 4885806 chrX 4885864 4885893 13 89 1.5 4.0 2.8 3.4 116 chrX 4885777 intron CG42594 + chrX 4885835 intron CG42594 + chrX 4885893 intron CG42594 + chrX_13_4885001 chrX_4885001 RAL-492 2564 chrX 4931329 4931381 chrX 4931442 4931469 11 109 26.0 20.0 23.0 0.5 140 chrX 4931329 intron CG44774 - chrX 4931399 intron CG44774 - chrX 4931469 intron CG44774 - chrX_11_4930001 chrX_4930001 RAL-492 2565 chrX 5096254 5096304 chrX 5103839 5103888 springer 8 7583 0.5 3.5 2.0 2.7 7634 chrX 5096254 intron,intron CG15465 +,rg + chrX 5100071 intron,intron CG15465 +,rg + chrX 5103888 intron,intron CG15465 +,rg + chrX_8_5100001 chrX_5100001 RAL-492 2566 chrX 5134800 5134825 chrX 5134900 5134930 12 115 5.5 1.5 3.5 2.7 130 chrX 5134800 intron,intron CG15465 +,rg + chrX 5134865 intron,intron CG15465 +,rg + chrX 5134930 intron,intron CG15465 +,rg + chrX_12_5130001 chrX_5130001 RAL-492 2567 chrX 5204439 5204453 chrX 5204660 5204675 6 222 5.0 7.0 6.0 0.9 236 chrX 5204439 intron,intron CG15465 +,rg + chrX 5204557 intron,intron CG15465 +,rg + chrX 5204675 intron,intron CG15465 +,rg + chrX_6_5200001 chrX_5200001 RAL-492 2568 chrX 5204455 5204480 chrX 5204654 5204703 9 217 3.0 6.0 4.5 1.6 248 chrX 5204455 intron,intron CG15465 +,rg + chrX 5204579 intron,intron CG15465 +,rg + chrX 5204703 intron,intron CG15465 +,rg + chrX_9_5200001 chrX_5200001 RAL-492 2569 chrX 5223709 5223719 chrX 5223807 5223817 5 98 4.5 13.5 9.0 0.5 108 chrX 5223709 intron,intron CG15465 +,rg + chrX 5223763 intron,intron CG15465 +,rg + chrX 5223817 intron,intron CG15465 +,rg + chrX_5_5220001 chrX_5220001 RAL-492 2570 chrX 5345431 5345472 chrX 5345563 5345604 8 132 1.5 4.5 3.0 2.0 173 chrX 5345431 intron SK + chrX 5345518 intron SK + chrX 5345604 intron SK + chrX_8_5345001 chrX_5345001 RAL-492 2571 chrX 5366288 5366333 chrX 5366436 5366481 7 147 0.5 1.0 0.8 3.9 193 chrX 5366288 intron SK + chrX 5366384 intron SK + chrX 5366481 intron SK + chrX_7_5365001 chrX_5365001 RAL-492 2572 chrX 5473566 5473617 chrX 5473662 5473665 14 87 3.5 3.0 3.2 3.3 99 chrX 5473566 intron SPR + chrX 5473616 intron SPR + chrX 5473665 intron SPR + chrX_14_5470001 chrX_5470001 RAL-492 2573 chrX 5524824 5524853 chrX 5528702 5528736 412 5 3881 5.5 0.5 3.0 1.2 3912 chrX 5524824 intergenic snoRNA:Psi28S-3342 - chrX 5526780 intergenic not near genes chrX 5528736 intergenic Vsx2 - chrX_5_5525001 chrX_5525001 RAL-492 2574 chrX 5798872 5798885 chrX 5799038 5799067 5 173 2.5 5.5 4.0 1.0 195 chrX 5798872 intergenic not near genes chrX 5798970 intergenic not near genes chrX 5799067 intergenic not near genes chrX_5_5795001 chrX_5795001 RAL-492 2575 chrX 5883801 5883835 chrX 5884062 5884096 pogo 8 261 3.5 5.0 4.2 1.5 295 chrX 5883801 intron CR45668 - chrX 5883948 intron CR45668 - chrX 5884096 intron CR45668 - chrX_8_5880001 chrX_5880001 RAL-492 2576 chrX 5884143 5884190 chrX 5884404 5884451 pogo 9 260 5.5 3.0 4.2 1.7 308 chrX 5884143 intron CR45668 - chrX 5884297 intron CR45668 - chrX 5884451 intron CR45668 - chrX_9_5880001 chrX_5880001 RAL-492 2577 chrX 5917480 5917502 chrX 5917578 5917602 6 100 4.0 3.0 3.5 1.3 122 chrX 5917480 5` UTR CG3726 + chrX 5917541 5` UTR CG3726 + chrX 5917602 5` UTR CG3726 + chrX_6_5915001 chrX_5915001 RAL-492 2578 chrX 6003279 6003310 chrX 6003380 6003411 5 100 0.5 5.5 3.0 1.2 132 chrX 6003279 intron CR44498 + chrX 6003345 intron CR44498 + chrX 6003411 intron CR44498 + chrX_5_6000001 chrX_6000001 RAL-492 2579 chrX 6009220 6009272 chrX 6009580 6009632 10 354 0.5 2.0 1.2 4.5 412 chrX 6009220 intron mab-21 - chrX 6009426 intron mab-21 - chrX 6009632 intron mab-21 - chrX_10_6005001 chrX_6005001 RAL-492 2580 chrX 6037530 6037584 chrX 6037733 6037787 15 202 4.0 5.5 4.8 2.6 257 chrX 6037530 intron rux - chrX 6037658 intron rux - chrX 6037787 5` UTR rux - chrX_15_6035001 chrX_6035001 RAL-492 2581 chrX 6077120 6077138 chrX 6077209 6077236 6 98 0.0 0.5 0.2 5.0 116 chrX 6077120 intron CG4666 - chrX 6077178 intron CG4666 - chrX 6077236 intron CG4666 - chrX_6_6075001 chrX_6075001 RAL-492 2582 chrX 6100227 6100259 chrX 6100804 6100836 10 576 4.0 7.0 5.5 1.5 609 chrX 6100227 intron Nep1 + chrX 6100532 intron Nep1 + chrX 6100836 intron Nep1 + chrX_10_6100001 chrX_6100001 RAL-492 2583 chrX 6171571 6171595 chrX 6179024 6179048 Quasimodo 4 7452 7.0 4.5 5.8 0.6 7477 chrX 6171571 intron Ca-alpha1T - chrX 6175310 intron Ca-alpha1T - chrX 6179048 intron Ca-alpha1T - chrX_4_6175001 chrX_6175001 RAL-492 2584 chrX 6171597 6171616 chrX 6179020 6179055 Quasimodo 5 7434 3.5 4.5 4.0 1.0 7458 chrX 6171597 intron Ca-alpha1T - chrX 6175326 intron Ca-alpha1T - chrX 6179055 intron Ca-alpha1T - chrX_5_6175001 chrX_6175001 RAL-492 2585 chrX 6312181 6312222 chrX 6312279 6312300 9 98 3.0 7.0 5.0 1.5 119 chrX 6312181 intron CG15894 + chrX 6312240 intron CG15894 + chrX 6312300 intron CG15894 + chrX_9_6310001 chrX_6310001 RAL-492 2586 chrX 6335221 6335242 chrX 6337762 6337783 Tirant 6 2540 0.5 3.0 1.8 2.1 2562 chrX 6335221 intergenic not near genes chrX 6336502 intergenic not near genes chrX 6337783 5` UTR CG3842 + chrX_6_6335001 chrX_6335001 RAL-492 2587 chrX 6388647 6388689 chrX 6388743 6388785 9 96 2.0 4.0 3.0 2.2 138 chrX 6388647 intergenic not near genes chrX 6388716 intergenic not near genes chrX 6388785 intergenic not near genes chrX_9_6385001 chrX_6385001 RAL-492 2588 chrX 6392872 6392876 chrX 6397653 6397661 Doc 4 4784 7.5 9.0 8.2 0.4 4789 chrX 6392872 intergenic not near genes chrX 6395266 intergenic not near genes chrX 6397661 intergenic not near genes chrX_4_6395001 chrX_6395001 RAL-492 2589 chrX 6392879 6392900 chrX 6397628 6397683 Doc 8 4771 3.0 5.5 4.2 1.5 4804 chrX 6392879 intergenic not near genes chrX 6395281 intergenic not near genes chrX 6397683 intergenic not near genes chrX_8_6395001 chrX_6395001 RAL-492 2590 chrX 6458001 6458050 chrX 6458098 6458147 9 96 2.5 3.5 3.0 2.2 146 chrX 6458001 intron CG42340 - chrX 6458074 intron CG42340 - chrX 6458147 intron CG42340 - chrX_9_6455001 chrX_6455001 RAL-492 2591 chrX 6470386 6470441 chrX 6470499 6470554 14 113 4.0 1.5 2.8 3.7 168 chrX 6470386 intron CG42340 - chrX 6470470 intron CG42340 - chrX 6470554 intron CG42340 - chrX_14_6470001 chrX_6470001 RAL-492 2592 chrX 6562806 6562813 chrX 6571308 6571314 Tirant 4 8500 14.5 5.0 9.8 0.4 8508 chrX 6562806 intron CG34417 + chrX 6567060 intron CG34417 + chrX 6571314 intron CG34417 + chrX_4_6565001 chrX_6565001 RAL-492 2593 chrX 6562820 6562849 chrX 6571303 6571342 Tirant 7 8489 8.0 4.5 6.2 1.0 8522 chrX 6562820 intron CG34417 + chrX 6567081 intron CG34417 + chrX 6571342 intron CG34417 + chrX_7_6565001 chrX_6565001 RAL-492 2594 chrX 6587730 6587745 chrX 6587842 6587857 6 114 7.5 5.0 6.2 0.8 127 chrX 6587730 intron CG34417 + chrX 6587794 intron CG34417 + chrX 6587857 intron CG34417 + chrX_6_6585001 chrX_6585001 RAL-492 2595 chrX 6587751 6587761 chrX 6587868 6587878 5 117 4.0 6.5 5.2 0.8 127 chrX 6587751 intron CG34417 + chrX 6587814 intron CG34417 + chrX 6587878 intron CG34417 + chrX_5_6585001 chrX_6585001 RAL-492 2596 chrX 6591835 6591873 chrX 6591940 6591978 5 105 1.0 0.0 0.5 3.3 143 chrX 6591835 intron Pat1 + chrX 6591906 intron Pat1 + chrX 6591978 intron Pat1 + chrX_5_6590001 chrX_6590001 RAL-492 2597 chrX 6605464 6605495 chrX 6608506 6608537 Burdock 5 3042 2.0 6.5 4.2 1.0 3073 chrX 6605464 intron pigs + chrX 6607000 intron pigs + chrX 6608537 intron pigs + chrX_5_6605001 chrX_6605001 RAL-492 2598 chrX 6629770 6629793 chrX 6629877 6629900 5 107 1.5 1.5 1.5 2.0 130 chrX 6629770 intron pigs + chrX 6629835 intron pigs + chrX 6629900 intron pigs + chrX_5_6625001 chrX_6625001 RAL-492 2599 chrX 6865771 6865796 chrX 6865872 6865900 10 101 8.5 6.0 7.2 1.2 129 chrX 6865771 intron CG14434 - chrX 6865836 intron CG14434 - chrX 6865900 intron CG14434 - chrX_10_6865001 chrX_6865001 RAL-492 2600 chrX 6897586 6897709 chrX 6897668 6897836 17 122 0.5 0.5 0.5 11.3 250 chrX 6897586 intergenic not near genes chrX 6897711 intergenic not near genes chrX 6897836 intergenic not near genes chrX_17_6895001 chrX_6895001 RAL-492 2601 chrX 6989484 6989534 chrX 6989591 6989641 14 105 3.5 5.5 4.5 2.5 157 chrX 6989484 intron ogre - chrX 6989562 intron ogre - chrX 6989641 intron ogre - chrX_14_6985001 chrX_6985001 RAL-492 2602 chrX 7023583 7023610 chrX 7030991 7030998 Tabor 5 7405 9.0 3.5 6.2 0.7 7415 chrX 7023583 intron CG12541 - chrX 7027290 intron CG12541 - chrX 7030998 intron CG12541 - chrX_5_7025001 chrX_7025001 RAL-492 2603 chrX 7023616 7023634 chrX 7030989 7031028 Tabor 7 7395 7.0 3.5 5.2 1.1 7412 chrX 7023616 intron CG12541 - chrX 7027322 intron CG12541 - chrX 7031028 intron CG12541 - chrX_7_7025001 chrX_7025001 RAL-492 2604 chrX 7125227 7125264 chrX 7134406 7134442 roo 12 9177 0.5 3.5 2.0 4.0 9215 chrX 7125227 intergenic not near genes chrX 7129834 intergenic not near genes chrX 7134442 intergenic not near genes chrX_12_7125001 chrX_7125001 RAL-492 2605 chrX 7322880 7322922 chrX 7322983 7323025 16 103 6.0 5.5 5.8 2.4 145 chrX 7322880 intron,intron,intron CR44357 -,CG1677 -,Atg5 - chrX 7322952 intron,intron,intron CR44357 -,CG1677 -,Atg5 - chrX 7323025 intron,intron,intron CR44357 -,CG1677 -,Atg5 - chrX_16_7320001 chrX_7320001 RAL-492 2606 chrX 7560141 7560186 chrX 7560243 7560281 11 98 4.5 1.0 2.8 2.9 140 chrX 7560141 intergenic not near genes chrX 7560211 intergenic not near genes chrX 7560281 intergenic not near genes chrX_11_7560001 chrX_7560001 RAL-492 2607 chrX 7570619 7570658 chrX 7570773 7570812 6 153 2.5 3.0 2.8 1.6 193 chrX 7570619 intergenic not near genes chrX 7570716 intergenic not near genes chrX 7570812 intergenic not near genes chrX_6_7570001 chrX_7570001 RAL-492 2608 chrX 7702890 7702939 chrX 7703348 7703365 jockey 14 455 6.0 5.5 5.8 2.1 475 chrX 7702890 intron CHES-1-like - chrX 7703128 intron CHES-1-like - chrX 7703365 intron CHES-1-like - chrX_14_7700001 chrX_7700001 RAL-492 2609 chrX 7784219 7784224 chrX 7784541 7784541 jockey 4 321 7.5 5.0 6.2 0.6 322 chrX 7784219 intergenic not near genes chrX 7784380 intergenic not near genes chrX 7784541 intergenic not near genes chrX_4_7780001 chrX_7780001 RAL-492 2610 chrX 7845705 7845755 chrX 7847215 7847264 hopper2 6 1510 4.5 5.5 5.0 1.0 1559 chrX 7845705 intergenic not near genes chrX 7846484 intergenic not near genes chrX 7847264 intergenic not near genes chrX_6_7845001 chrX_7845001 RAL-492 2611 chrX 7960873 7960882 chrX 7960982 7960991 4 108 3.5 4.0 3.8 0.8 118 chrX 7960873 intron,5` UTR sws -,CR45620 + chrX 7960932 intron sws - chrX 7960991 intron sws - chrX_4_7960001 chrX_7960001 RAL-492 2612 chrX 8085554 8085603 chrX 8085660 8085709 18 105 4.5 3.0 3.8 3.8 155 chrX 8085554 intron,5` UTR CG2256 -,CR45535 + chrX 8085632 intron,5` UTR CG2256 -,CR45535 + chrX 8085709 intron,5` UTR CG2256 -,CR45535 + chrX_18_8085001 chrX_8085001 RAL-492 2613 chrX 8092269 8092294 chrX 8092371 8092371 7 100 5.5 0.0 2.8 1.8 102 chrX 8092269 intron Ubc-E2H - chrX 8092320 intron Ubc-E2H - chrX 8092371 intron Ubc-E2H - chrX_7_8090001 chrX_8090001 RAL-492 2614 chrX 8190445 8190477 chrX 8190578 8190582 7 127 0.5 1.5 1.0 3.5 137 chrX 8190445 intron sdt + chrX 8190514 intron sdt + chrX 8190582 intron sdt + chrX_7_8190001 chrX_8190001 RAL-492 2615 chrX 8214396 8214434 chrX 8214504 8214515 13 105 5.5 2.5 4.0 2.6 119 chrX 8214396 intron sdt + chrX 8214456 intron sdt + chrX 8214515 intron sdt + chrX_13_8210001 chrX_8210001 RAL-492 2616 chrX 8364826 8364878 chrX 8365243 8365310 BS 4 429 2.0 0.0 1.0 2.0 484 chrX 8364826 intron nAChRalpha3 - chrX 8365068 intron nAChRalpha3 - chrX 8365310 intron nAChRalpha3 - chrX_4_8365001 chrX_8365001 RAL-492 2617 chrX 8450999 8451008 chrX 8451098 8451107 4 99 1.5 5.0 3.2 1.0 108 chrX 8450999 intron org-1 - chrX 8451053 intron org-1 - chrX 8451107 exon org-1 - chrX_4_8450001 chrX_8450001 RAL-492 2618 chrX 8506020 8506061 chrX 8506118 8506159 6 98 3.5 2.5 3.0 1.5 139 chrX 8506020 intron CG33181 + chrX 8506090 intron CG33181 + chrX 8506159 intron CG33181 + chrX_6_8505001 chrX_8505001 RAL-492 2619 chrX 8747995 8748024 chrX 8748097 8748124 5 98 2.5 2.5 2.5 1.4 129 chrX 8747995 intergenic not near genes chrX 8748060 intergenic not near genes chrX 8748124 intergenic not near genes chrX_5_8745001 chrX_8745001 RAL-492 2620 chrX 8772225 8772252 chrX 8772334 8772337 8 105 2.5 7.0 4.8 1.4 112 chrX 8772225 intron Lim1 - chrX 8772281 intron Lim1 - chrX 8772337 intron Lim1 - chrX_8_8770001 chrX_8770001 RAL-492 2621 chrX 8802508 8802552 chrX 8803111 8803158 7 596 3.5 3.0 3.2 1.7 650 chrX 8802508 intron Lim1 - chrX 8802833 intron Lim1 - chrX 8803158 intron Lim1 - chrX_7_8800001 chrX_8800001 RAL-492 2622 chrX 8860772 8860775 chrX 8860876 8860877 4 104 0.0 5.5 2.8 1.1 105 chrX 8860772 intron CG12075 + chrX 8860824 intron CG12075 + chrX 8860877 intron CG12075 + chrX_4_8860001 chrX_8860001 RAL-492 2623 chrX 8860776 8860802 chrX 8860863 8860905 6 100 0.0 3.5 1.8 2.1 129 chrX 8860776 intron CG12075 + chrX 8860840 intron CG12075 + chrX 8860905 intron CG12075 + chrX_6_8860001 chrX_8860001 RAL-492 2624 chrX 8885653 8885672 chrX 8885773 8885792 4 119 1.0 7.5 4.2 0.8 139 chrX 8885653 intron Moe - chrX 8885722 intron Moe - chrX 8885792 intron Moe - chrX_4_8885001 chrX_8885001 RAL-492 2625 chrX 8885674 8885700 chrX 8885770 8885781 7 110 1.0 7.0 4.0 1.4 107 chrX 8885674 intron Moe - chrX 8885728 intron Moe - chrX 8885781 intron Moe - chrX_7_8885001 chrX_8885001 RAL-492 2626 chrX 8893195 8893243 chrX 8893293 8893342 8 96 3.0 1.0 2.0 2.7 147 chrX 8893195 intron Moe - chrX 8893268 intron Moe - chrX 8893342 intron Moe - chrX_8_8890001 chrX_8890001 RAL-492 2627 chrX 8922316 8922327 chrX 8922770 8922781 jockey 4 454 14.5 6.5 10.5 0.3 465 chrX 8922316 intron rdgA + chrX 8922548 intron rdgA + chrX 8922781 intron rdgA + chrX_4_8920001 chrX_8920001 RAL-492 2628 chrX 8922346 8922359 chrX 8922757 8922808 jockey 8 435 7.0 4.0 5.5 1.2 462 chrX 8922346 intron rdgA + chrX 8922577 intron rdgA + chrX 8922808 intron rdgA + chrX_8_8920001 chrX_8920001 RAL-492 2629 chrX 8948750 8948777 chrX 8956280 8956306 roo 4 7530 6.0 3.0 4.5 0.7 7556 chrX 8948750 intron rdgA + chrX 8952528 intron rdgA + chrX 8956306 intron rdgA + chrX_4_8950001 chrX_8950001 RAL-492 2630 chrX 9220532 9220570 chrX 9220678 9220701 5 142 31.0 32.5 31.8 0.2 169 chrX 9220532 intron t - chrX 9220616 intron t - chrX 9220701 intron t - chrX_5_9220001 chrX_9220001 RAL-492 2631 chrX 9391558 9391601 chrX 9391724 9391767 12 164 3.5 3.5 3.5 2.7 209 chrX 9391558 intron mgl - chrX 9391662 intron mgl - chrX 9391767 intron mgl - chrX_12_9390001 chrX_9390001 RAL-492 2632 chrX 9508137 9508158 chrX 9509670 9509696 jockey 8 1537 4.0 4.0 4.0 1.6 1559 chrX 9508137 intron CG32700 - chrX 9508916 intron CG32700 - chrX 9509696 intron CG32700 - chrX_8_9505001 chrX_9505001 RAL-492 2633 chrX 9531639 9531672 chrX 9531739 9531772 4 100 6.0 0.5 3.2 1.0 133 chrX 9531639 intron CG32700 - chrX 9531706 intron CG32700 - chrX 9531772 intron CG32700 - chrX_4_9530001 chrX_9530001 RAL-492 2634 chrX 9543383 9543426 chrX 9543481 9543524 8 98 4.5 5.0 4.8 1.4 141 chrX 9543383 intron CG32700 - chrX 9543454 intron CG32700 - chrX 9543524 intron CG32700 - chrX_8_9540001 chrX_9540001 RAL-492 2635 chrX 9575792 9575820 chrX 9576115 9576164 mdg3 11 322 6.0 3.5 4.8 1.9 372 chrX 9575792 intron,exon CG32699 -,CG42395 - chrX 9575978 intron,intron CG32699 -,CG42395 - chrX 9576164 intron,5` UTR CG32699 -,CG42395 - chrX_11_9575001 chrX_9575001 RAL-492 2636 chrX 9577194 9577241 chrX 9577922 9577969 9 726 3.5 3.0 3.2 2.1 775 chrX 9577194 intron CG32699 - chrX 9577582 intron CG32699 - chrX 9577969 intron CG32699 - chrX_9_9575001 chrX_9575001 RAL-492 2637 chrX 9599155 9599202 chrX 9599253 9599300 12 90 2.5 4.5 3.5 2.7 145 chrX 9599155 intergenic not near genes chrX 9599228 intergenic not near genes chrX 9599300 intergenic not near genes chrX_12_9595001 chrX_9595001 RAL-492 2638 chrX 9633273 9633305 chrX 9633384 9633417 13 110 5.0 2.5 3.8 2.7 144 chrX 9633273 intron l(1)G0232 - chrX 9633345 intron l(1)G0232 - chrX 9633417 intron l(1)G0232 - chrX_13_9630001 chrX_9630001 RAL-492 2639 chrX 9758035 9758080 chrX 9758140 9758185 4 105 1.0 0.0 0.5 2.7 150 chrX 9758035 intergenic not near genes chrX 9758110 intergenic not near genes chrX 9758185 intergenic not near genes chrX_4_9755001 chrX_9755001 RAL-492 2640 chrX 9791854 9791888 chrX 9791970 9792005 9 115 4.0 4.5 4.2 1.7 151 chrX 9791854 intron CG32698 + chrX 9791930 intron CG32698 + chrX 9792005 intron CG32698 + chrX_9_9790001 chrX_9790001 RAL-492 2641 chrX 9993332 9993376 chrX 9993500 9993544 5 168 1.0 1.5 1.2 2.3 212 chrX 9993332 intron CG32694 + chrX 9993438 intron CG32694 + chrX 9993544 intron CG32694 + chrX_5_9990001 chrX_9990001 RAL-492 2642 chrX 9999003 9999045 chrX 9999102 9999144 11 95 4.0 0.5 2.2 3.4 141 chrX 9999003 intron CG32694 + chrX 9999074 intron CG32694 + chrX 9999144 intron CG32694 + chrX_11_9995001 chrX_9995001 RAL-492 2643 chrX 10138200 10138245 chrX 10145724 10145769 412 5 7523 2.5 0.0 1.2 2.3 7569 chrX 10138200 intron,intron RhoU +,CR44894 - chrX 10141984 intron,intron RhoU +,CR44894 - chrX 10145769 intron,intron RhoU +,CR44894 - chrX_5_10140001 chrX_10140001 RAL-492 2644 chrX 10154274 10154307 chrX 10154370 10154375 6 91 2.0 3.0 2.5 1.7 101 chrX 10154274 intron,intron CR44894 -,CG12645 + chrX 10154324 intron,intron CR44894 -,CG12645 + chrX 10154375 intron,intron CR44894 -,CG12645 + chrX_6_10150001 chrX_10150001 RAL-492 2645 chrX 10216827 10216843 chrX 10216928 10216940 4 96 12.0 11.0 11.5 0.3 113 chrX 10216827 3` UTR l(1)G0230 + chrX 10216884 3` UTR l(1)G0230 + chrX 10216940 3` UTR l(1)G0230 + chrX_4_10215001 chrX_10215001 RAL-492 2646 chrX 10295236 10295283 chrX 10295653 10295701 6 408 4.0 3.0 3.5 1.3 465 chrX 10295236 intron alpha-Man-I - chrX 10295468 intron alpha-Man-I - chrX 10295701 intron alpha-Man-I - chrX_6_10295001 chrX_10295001 RAL-492 2647 chrX 10317539 10317579 chrX 10317636 10317677 4 97 0.0 3.0 1.5 1.6 138 chrX 10317539 intron alpha-Man-I - chrX 10317608 intron alpha-Man-I - chrX 10317677 intron alpha-Man-I - chrX_4_10315001 chrX_10315001 RAL-492 2648 chrX 10348781 10348819 chrX 10356365 10356404 springer 5 7580 1.5 2.0 1.8 1.8 7623 chrX 10348781 intergenic snoRNA:U3:9B + chrX 10352592 intergenic not near genes chrX 10356404 intergenic l(1)G0289 - chrX_5_10350001 chrX_10350001 RAL-492 2649 chrX 10446682 10446711 chrX 10446784 10446791 6 94 4.5 3.0 3.8 1.2 109 chrX 10446682 intron CG32683 - chrX 10446736 intron CG32683 - chrX 10446791 intron CG32683 - chrX_6_10445001 chrX_10445001 RAL-492 2650 chrX 10453058 10453099 chrX 10453269 10453307 5 210 1.5 3.0 2.2 1.6 249 chrX 10453058 intron CG32683 - chrX 10453182 intron CG32683 - chrX 10453307 intron CG32683 - chrX_5_10450001 chrX_10450001 RAL-492 2651 chrX 10550837 10550877 chrX 10552323 10552364 hobo 7 1483 4.5 2.5 3.5 1.6 1527 chrX 10550837 intron spri - chrX 10551600 intron spri - chrX 10552364 intron spri - chrX_7_10550001 chrX_10550001 RAL-492 2652 chrX 10636273 10636285 chrX 10636405 10636417 4 131 4.5 4.0 4.2 0.8 144 chrX 10636273 intron X11Lbeta + chrX 10636345 intron X11Lbeta + chrX 10636417 intron X11Lbeta + chrX_4_10635001 chrX_10635001 RAL-492 2653 chrX 10686034 10686077 chrX 10691191 10691234 roo 5 5156 3.5 3.0 3.2 1.2 5200 chrX 10686034 intron X11Lbeta + chrX 10688634 intron X11Lbeta + chrX 10691234 intron X11Lbeta + chrX_5_10685001 chrX_10685001 RAL-492 2654 chrX 10719129 10719149 chrX 10719233 10719251 8 104 0.0 8.5 4.2 1.5 122 chrX 10719129 intron CG32676 - chrX 10719190 intron CG32676 - chrX 10719251 intron CG32676 - chrX_8_10715001 chrX_10715001 RAL-492 2655 chrX 10803018 10803047 chrX 10803119 10803133 12 101 8.0 5.5 6.8 1.5 115 chrX 10803018 intron Imp - chrX 10803076 intron Imp - chrX 10803133 intron Imp - chrX_12_10800001 chrX_10800001 RAL-492 2656 chrX 11026417 11026443 chrX 11026714 11026714 4 286 4.0 1.5 2.8 1.1 297 chrX 11026417 intron CG42339 - chrX 11026566 intron CG42339 - chrX 11026714 intron CG42339 - chrX_4_11025001 chrX_11025001 RAL-492 2657 chrX 11088559 11088601 chrX 11088670 11088712 7 111 3.0 3.5 3.2 1.7 153 chrX 11088559 intergenic not near genes chrX 11088636 intergenic not near genes chrX 11088712 intergenic not near genes chrX_7_11085001 chrX_11085001 RAL-492 2658 chrX 11095980 11096018 chrX 11103102 11103140 HMS-Beagle 5 7122 1.5 3.0 2.2 1.6 7160 chrX 11095980 intergenic not near genes chrX 11099560 intergenic not near genes chrX 11103140 intron CG42249 + chrX_5_11095001 chrX_11095001 RAL-492 2659 chrX 11152681 11152730 chrX 11152830 11152880 8 144 0.5 5.0 2.8 2.1 199 chrX 11152681 3` UTR rtv - chrX 11152780 3` UTR rtv - chrX 11152880 3` UTR rtv - chrX_8_11150001 chrX_11150001 RAL-492 2660 chrX 11166736 11166777 chrX 11166836 11166859 4 95 5.5 4.5 5.0 0.7 123 chrX 11166736 intergenic not near genes chrX 11166798 intergenic not near genes chrX 11166859 intergenic not near genes chrX_4_11165001 chrX_11165001 RAL-492 2661 chrX 11184244 11184276 chrX 11189338 11189369 flea 5 5094 3.5 3.5 3.5 1.1 5125 chrX 11184244 intergenic not near genes chrX 11186806 intergenic not near genes chrX 11189369 intergenic not near genes chrX_5_11185001 chrX_11185001 RAL-492 2662 chrX 11312065 11312089 chrX 11319409 11319458 Stalker2 6 7361 3.0 2.0 2.5 1.7 7393 chrX 11312065 intergenic not near genes chrX 11315762 intergenic not near genes chrX 11319458 intergenic not near genes chrX_6_11315001 chrX_11315001 RAL-492 2663 chrX 11379748 11379792 chrX 11379910 11379957 11 163 2.5 5.0 3.8 2.3 209 chrX 11379748 intron dlg1 + chrX 11379852 intron dlg1 + chrX 11379957 intron dlg1 + chrX_11_11375001 chrX_11375001 RAL-492 2664 chrX 11535026 11535045 chrX 11541515 11541535 Burdock 4 6488 9.0 2.0 5.5 0.6 6509 chrX 11535026 intron Drak + chrX 11538280 intron Drak + chrX 11541535 intron Drak + chrX_4_11535001 chrX_11535001 RAL-492 2665 chrX 11633400 11633441 chrX 11640473 11640515 297 9 7074 3.0 5.0 4.0 1.8 7115 chrX 11633400 intron Ptp10D + chrX 11636958 intron Ptp10D + chrX 11640515 intron Ptp10D + chrX_9_11635001 chrX_11635001 RAL-492 2666 chrX 11645091 11645127 chrX 11648280 11648312 NOF 4 3188 3.0 1.5 2.2 1.2 3221 chrX 11645091 intron Ptp10D + chrX 11646702 intron Ptp10D + chrX 11648312 intron Ptp10D + chrX_4_11645001 chrX_11645001 RAL-492 2667 chrX 11719851 11719898 chrX 11719951 11719998 6 99 1.0 1.5 1.2 2.7 147 chrX 11719851 3` UTR prtp + chrX 11719924 intergenic prtp +,Tango10 + chrX 11719998 intergenic prtp +,Tango10 + chrX_6_11715001 chrX_11715001 RAL-492 2668 chrX 11775841 11775863 chrX 11775941 11775956 8 99 7.5 2.0 4.8 1.4 115 chrX 11775841 intron dy - chrX 11775898 intron dy - chrX 11775956 intron dy - chrX_8_11775001 chrX_11775001 RAL-492 2669 chrX 11922343 11922383 chrX 11922496 11922536 10 153 3.5 4.0 3.8 2.1 193 chrX 11922343 exon Sclp - chrX 11922440 intron Sclp - chrX 11922536 intron Sclp - chrX_10_11920001 chrX_11920001 RAL-492 2670 chrX 12179179 12179223 chrX 12179683 12179720 8 503 1.5 2.5 2.0 2.7 541 chrX 12179179 intron Ten-a + chrX 12179450 intron Ten-a + chrX 12179720 intron Ten-a + chrX_8_12175001 chrX_12175001 RAL-492 2671 chrX 12277162 12277212 chrX 12277272 12277324 7 109 2.5 2.5 2.5 2.0 162 chrX 12277162 intron Ten-a + chrX 12277243 intron Ten-a + chrX 12277324 intron Ten-a + chrX_7_12275001 chrX_12275001 RAL-492 2672 chrX 12301963 12301979 chrX 12303261 12303289 X-element 6 1298 0.5 2.5 1.5 2.4 1326 chrX 12301963 intron Ten-a + chrX 12302626 intron Ten-a + chrX 12303289 intron Ten-a + chrX_6_12300001 chrX_12300001 RAL-492 2673 chrX 12465466 12465486 chrX 12465562 12465569 4 92 1.5 0.0 0.8 2.2 103 chrX 12465466 exon CG42258 + chrX 12465518 intron CG42258 + chrX 12465569 intron CG42258 + chrX_4_12465001 chrX_12465001 RAL-492 2674 chrX 12533769 12533816 chrX 12533866 12533912 6 97 0.0 2.5 1.2 2.7 143 chrX 12533769 intron CG43921 - chrX 12533840 intron CG43921 - chrX 12533912 intron CG43921 - chrX_6_12530001 chrX_12530001 RAL-492 2675 chrX 12557132 12557161 chrX 12557228 12557257 5 95 5.0 2.5 3.8 1.0 125 chrX 12557132 intron CG43921 - chrX 12557194 intron CG43921 - chrX 12557257 intron CG43921 - chrX_5_12555001 chrX_12555001 RAL-492 2676 chrX 12785412 12785439 chrX 12785509 12785536 5 97 1.0 2.0 1.5 2.0 124 chrX 12785412 intergenic Pde9 -,CG32647 - chrX 12785474 intergenic Pde9 - chrX 12785536 intergenic Pde9 - chrX_5_12785001 chrX_12785001 RAL-492 2677 chrX 12882139 12882166 chrX 12882228 12882246 7 88 2.0 3.0 2.5 2.0 107 chrX 12882139 intron Pde9 - chrX 12882192 intron Pde9 - chrX 12882246 intron Pde9 - chrX_7_12880001 chrX_12880001 RAL-492 2678 chrX 12930583 12930605 chrX 12937719 12937741 HMS-Beagle 4 7134 1.5 5.0 3.2 1.0 7158 chrX 12930583 intron fne + chrX 12934162 intron fne + chrX 12937741 intron fne + chrX_4_12930001 chrX_12930001 RAL-492 2679 chrX 13146587 13146629 chrX 13146695 13146737 7 107 2.5 3.0 2.8 1.8 150 chrX 13146587 intron CG32645 + chrX 13146662 intron CG32645 + chrX 13146737 intron CG32645 + chrX_7_13145001 chrX_13145001 RAL-492 2680 chrX 13172349 13172380 chrX 13172444 13172476 9 96 4.5 5.5 5.0 1.5 127 chrX 13172349 exon CG34411 - chrX 13172412 intron CG34411 - chrX 13172476 intron CG34411 - chrX_9_13170001 chrX_13170001 RAL-492 2681 chrX 13236885 13236899 chrX 13236989 13237004 5 104 1.0 6.0 3.5 1.1 119 chrX 13236885 intron mew - chrX 13236944 intron mew - chrX 13237004 intron mew - chrX_5_13235001 chrX_13235001 RAL-492 2682 chrX 13269197 13269236 chrX 13269293 13269315 6 93 0.5 0.0 0.2 5.0 118 chrX 13269197 intron HDAC4 - chrX 13269256 intron HDAC4 - chrX 13269315 intron HDAC4 - chrX_6_13265001 chrX_13265001 RAL-492 2683 chrX 13373383 13373395 chrX 13373478 13373491 5 96 9.0 0.0 4.5 0.9 108 chrX 13373383 intron CG1640 + chrX 13373437 intron CG1640 + chrX 13373491 intron CG1640 + chrX_5_13370001 chrX_13370001 RAL-492 2684 chrX 13383890 13383904 chrX 13383965 13383968 5 90 5.0 6.0 5.5 0.8 78 chrX 13383890 intron Rbp1-like - chrX 13383929 intron Rbp1-like - chrX 13383968 intron Rbp1-like - chrX_5_13380001 chrX_13380001 RAL-492 2685 chrX 13429445 13429491 chrX 13430614 13430660 jockey 16 1167 3.0 7.5 5.2 2.6 1215 chrX 13429445 intergenic not near genes chrX 13430052 intergenic not near genes chrX 13430660 intergenic not near genes chrX_16_13430001 chrX_13430001 RAL-492 2686 chrX 13463629 13463672 chrX 13469226 13469269 mdg3 11 5597 2.0 1.5 1.8 3.9 5640 chrX 13463629 intron Neto + chrX 13466449 intron Neto + chrX 13469269 intron Neto + chrX_11_13465001 chrX_13465001 RAL-492 2687 chrX 13734078 13734109 chrX 13734193 13734223 7 114 5.5 7.0 6.2 1.0 145 chrX 13734078 intron g - chrX 13734150 intron g - chrX 13734223 intron g - chrX_7_13730001 chrX_13730001 RAL-492 2688 chrX 13934283 13934313 chrX 13934386 13934416 6 103 1.0 3.5 2.2 1.9 133 chrX 13934283 intron mamo - chrX 13934350 intron mamo - chrX 13934416 intron mamo - chrX_6_13930001 chrX_13930001 RAL-492 2689 chrX 14105004 14105014 chrX 14114172 14114185 roo 5 9170 8.5 2.5 5.5 0.8 9181 chrX 14105004 intergenic not near genes chrX 14109594 intergenic not near genes chrX 14114185 5` UTR CR44657 + chrX_5_14105001 chrX_14105001 RAL-492 2690 chrX 14105016 14105056 chrX 14114171 14114195 roo 16 9157 2.5 2.5 2.5 4.6 9179 chrX 14105016 intergenic not near genes chrX 14109606 intergenic not near genes chrX 14114195 5` UTR CR44657 + chrX_16_14105001 chrX_14105001 RAL-492 2691 chrX 14131471 14131524 chrX 14131572 14131598 6 88 2.0 7.5 4.8 1.0 127 chrX 14131471 intergenic not near genes chrX 14131534 intergenic not near genes chrX 14131598 intergenic not near genes chrX_6_14130001 chrX_14130001 RAL-492 2692 chrX 14209456 14209478 chrX 14209566 14209589 4 110 7.0 6.0 6.5 0.5 133 chrX 14209456 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209522 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209589 intron,intron l(1)G0007 +,l(1)G0469 - chrX_4_14205001 chrX_14205001 RAL-492 2693 chrX 14330827 14330846 chrX 14330924 14330943 7 95 3.5 4.0 3.8 1.5 116 chrX 14330827 intron dpr8 + chrX 14330885 intron dpr8 + chrX 14330943 intron dpr8 + chrX_7_14330001 chrX_14330001 RAL-492 2694 chrX 14353429 14353449 chrX 14353532 14353535 4 98 3.0 2.5 2.8 1.1 106 chrX 14353429 intron dpr8 + chrX 14353482 intron dpr8 + chrX 14353535 intron dpr8 + chrX_4_14350001 chrX_14350001 RAL-492 2695 chrX 14353450 14353468 chrX 14353522 14353544 5 77 2.0 2.0 2.0 1.7 94 chrX 14353450 intron dpr8 + chrX 14353497 intron dpr8 + chrX 14353544 intron dpr8 + chrX_5_14350001 chrX_14350001 RAL-492 2696 chrX 14404993 14405022 chrX 14405091 14405120 6 98 1.0 4.0 2.5 1.7 127 chrX 14404993 intron dpr8 + chrX 14405056 intron dpr8 + chrX 14405120 intron dpr8 + chrX_6_14405001 chrX_14405001 RAL-492 2697 chrX 14407248 14407277 chrX 14407350 14407379 6 102 0.0 1.0 0.5 4.0 131 chrX 14407248 intron dpr8 + chrX 14407314 intron dpr8 + chrX 14407379 intron dpr8 + chrX_6_14405001 chrX_14405001 RAL-492 2698 chrX 14487830 14487848 chrX 14487936 14487963 4 113 3.5 6.0 4.8 0.7 133 chrX 14487830 intergenic not near genes chrX 14487896 intergenic not near genes chrX 14487963 intergenic not near genes chrX_4_14485001 chrX_14485001 RAL-492 2699 chrX 14597717 14597746 chrX 14597814 14597843 6 96 5.5 4.0 4.8 1.0 126 chrX 14597717 intron CG9413 - chrX 14597780 intron CG9413 - chrX 14597843 intron CG9413 - chrX_6_14595001 chrX_14595001 RAL-492 2700 chrX 14636451 14636491 chrX 14641906 14641923 I-element 12 5453 3.5 4.5 4.0 2.4 5472 chrX 14636451 intron NetA - chrX 14639187 intron NetA - chrX 14641923 intron NetA - chrX_12_14635001 chrX_14635001 RAL-492 2701 chrX 14714033 14714050 chrX 14714135 14714139 7 100 4.5 6.5 5.5 1.1 106 chrX 14714033 intron NetB - chrX 14714086 intron NetB - chrX 14714139 intron NetB - chrX_7_14710001 chrX_14710001 RAL-492 2702 chrX 14714051 14714062 chrX 14714128 14714164 5 96 3.0 5.5 4.2 1.0 113 chrX 14714051 intron NetB - chrX 14714108 intron NetB - chrX 14714164 intron NetB - chrX_5_14710001 chrX_14710001 RAL-492 2703 chrX 14778031 14778053 chrX 14782848 14782858 Doc 4 4814 2.5 3.5 3.0 1.0 4827 chrX 14778031 intergenic CG5347 + chrX 14780444 intergenic not near genes chrX 14782858 intergenic Ag5r2 - chrX_4_14780001 chrX_14780001 RAL-492 2704 chrX 14818762 14818794 chrX 14823969 14824005 copia 8 5216 3.0 1.5 2.2 2.5 5243 chrX 14818762 intron rut - chrX 14821384 intron rut - chrX 14824005 intron rut - chrX_8_14820001 chrX_14820001 RAL-492 2705 chrX 14888931 14888977 chrX 14889037 14889082 12 106 3.5 0.5 2.0 4.0 151 chrX 14888931 intron,intron Flo2 +,CG9514 - chrX 14889006 intron,intron Flo2 +,CG9514 - chrX 14889082 intron,intron Flo2 +,CG9514 - chrX_12_14885001 chrX_14885001 RAL-492 2706 chrX 14900832 14900879 chrX 14901044 14901088 17 210 3.0 2.0 2.5 4.9 256 chrX 14900832 intron Flo2 + chrX 14900960 intron Flo2 + chrX 14901088 intron Flo2 + chrX_17_14900001 chrX_14900001 RAL-492 2707 chrX 14936845 14936887 chrX 14946122 14946164 roo 5 9277 3.0 4.5 3.8 1.0 9319 chrX 14936845 intron pdgy - chrX 14941504 intron pdgy - chrX 14946164 intron pdgy - chrX_5_14940001 chrX_14940001 RAL-492 2708 chrX 15149508 15149542 chrX 15149606 15149638 7 96 2.0 2.5 2.2 2.2 130 chrX 15149508 intron CG9095 - chrX 15149573 intron CG9095 - chrX 15149638 intron CG9095 - chrX_7_15145001 chrX_15145001 RAL-492 2709 chrX 15273705 15273729 chrX 15274875 15274912 1360 7 1173 4.5 5.5 5.0 1.2 1207 chrX 15273705 intergenic not near genes chrX 15274308 intergenic not near genes chrX 15274912 intergenic not near genes chrX_7_15270001 chrX_15270001 RAL-492 2710 chrX 15351510 15351539 chrX 15351618 15351649 7 107 5.5 5.0 5.2 1.1 139 chrX 15351510 3` UTR acj6 - chrX 15351580 3` UTR acj6 - chrX 15351649 3` UTR acj6 - chrX_7_15350001 chrX_15350001 RAL-492 2711 chrX 15351548 15351554 chrX 15351612 15351633 7 78 4.0 3.0 3.5 1.6 85 chrX 15351548 3` UTR acj6 - chrX 15351590 3` UTR acj6 - chrX 15351633 3` UTR acj6 - chrX_7_15350001 chrX_15350001 RAL-492 2712 chrX 15369810 15369859 chrX 15369913 15369960 10 99 2.5 2.5 2.5 2.9 150 chrX 15369810 intron acj6 - chrX 15369885 intron acj6 - chrX 15369960 intron acj6 - chrX_10_15365001 chrX_15365001 RAL-492 2713 chrX 15413049 15413061 chrX 15417354 15417358 Juan 5 4313 11.0 6.0 8.5 0.5 4309 chrX 15413049 intron Cngl - chrX 15415204 intron Cngl - chrX 15417358 intron Cngl - chrX_5_15415001 chrX_15415001 RAL-492 2714 chrX 15413065 15413084 chrX 15417353 15417361 Juan 6 4305 6.5 6.0 6.2 0.8 4296 chrX 15413065 intron Cngl - chrX 15415213 intron Cngl - chrX 15417361 intron Cngl - chrX_6_15415001 chrX_15415001 RAL-492 2715 chrX 15435688 15435704 chrX 15436139 15436151 rover 8 451 0.0 8.5 4.2 1.5 463 chrX 15435688 intron Cngl - chrX 15435920 intron Cngl - chrX 15436151 intron Cngl - chrX_8_15435001 chrX_15435001 RAL-492 2716 chrX 15536654 15536702 chrX 15536783 15536815 18 115 5.5 5.5 5.5 2.8 161 chrX 15536654 intron Ac13E - chrX 15536734 intron Ac13E - chrX 15536815 intron Ac13E - chrX_18_15535001 chrX_15535001 RAL-492 2717 chrX 15565652 15565666 chrX 15565758 15565771 5 106 1.5 3.5 2.5 1.4 119 chrX 15565652 intergenic not near genes chrX 15565712 intergenic not near genes chrX 15565771 intergenic not near genes chrX_5_15565001 chrX_15565001 RAL-492 2718 chrX 15597047 15597053 chrX 15597185 15597192 4 138 8.0 0.0 4.0 0.8 145 chrX 15597047 intergenic not near genes chrX 15597120 intergenic not near genes chrX 15597192 intergenic not near genes chrX_4_15595001 chrX_15595001 RAL-492 2719 chrX 15633991 15634031 chrX 15634388 15634428 7 394 0.5 1.5 1.0 3.5 437 chrX 15633991 intergenic not near genes chrX 15634210 intergenic not near genes chrX 15634428 intergenic not near genes chrX_7_15630001 chrX_15630001 RAL-492 2720 chrX 15671178 15671193 chrX 15671285 15671300 5 107 4.5 0.0 2.2 1.6 122 chrX 15671178 intergenic CG15646 - chrX 15671239 intergenic CG15646 - chrX 15671300 intergenic CG15646 - chrX_5_15670001 chrX_15670001 RAL-492 2721 chrX 15759500 15759536 chrX 15759596 15759632 7 96 2.0 1.5 1.8 2.5 132 chrX 15759500 intron Graf - chrX 15759566 intron Graf - chrX 15759632 intron Graf - chrX_7_15755001 chrX_15755001 RAL-492 2722 chrX 15959518 15959556 chrX 15959626 15959664 7 108 3.0 0.0 1.5 2.8 146 chrX 15959518 intron mmd - chrX 15959591 intron mmd - chrX 15959664 intron mmd - chrX_7_15955001 chrX_15955001 RAL-492 2723 chrX 16134970 16134987 chrX 16135158 16135173 4 187 3.0 5.5 4.2 0.8 203 chrX 16134970 intron disco-r - chrX 16135072 intron disco-r - chrX 16135173 intron disco-r - chrX_4_16135001 chrX_16135001 RAL-492 2724 chrX 16340649 16340660 chrX 16349823 16349835 roo 4 9174 1.5 2.5 2.0 1.3 9186 chrX 16340649 intergenic Dsp1 + chrX 16345242 intergenic not near genes chrX 16349835 intergenic sl + chrX_4_16345001 chrX_16345001 RAL-492 2725 chrX 16437588 16437634 chrX 16437695 16437741 8 107 1.5 0.0 0.8 4.4 153 chrX 16437588 3` UTR,3` UTR hang +,CG9947 - chrX 16437664 3` UTR,3` UTR hang +,CG9947 - chrX 16437741 3` UTR,3` UTR hang +,CG9947 - chrX_8_16435001 chrX_16435001 RAL-492 2726 chrX 16492633 16492679 chrX 16498230 16498276 mdg3 21 5597 3.5 6.5 5.0 3.5 5643 chrX 16492633 intron para - chrX 16495454 intron para - chrX 16498276 exon para - chrX_21_16495001 chrX_16495001 RAL-492 2727 chrX 16570855 16570873 chrX 16570955 16570973 4 100 10.0 2.0 6.0 0.6 118 chrX 16570855 intron CanA-14F - chrX 16570914 intron CanA-14F - chrX 16570973 intron CanA-14F - chrX_4_16570001 chrX_16570001 RAL-492 2728 chrX 16650912 16650944 chrX 16651004 16651017 6 90 4.0 0.0 2.0 2.0 105 chrX 16650912 intergenic CG32573 +,CG42512 + chrX 16650964 intergenic CG32573 +,CG42512 + chrX 16651017 intergenic CG32573 +,CG42512 + chrX_6_16650001 chrX_16650001 RAL-492 2729 chrX 16689616 16689641 chrX 16689708 16689719 7 95 3.5 3.5 3.5 1.6 103 chrX 16689616 intron Sep4 - chrX 16689668 intron Sep4 - chrX 16689719 intron Sep4 - chrX_7_16685001 chrX_16685001 RAL-492 2730 chrX 16690454 16690472 chrX 16690538 16690541 5 85 2.5 4.5 3.5 1.1 87 chrX 16690454 intron Sep4 - chrX 16690498 intron Sep4 - chrX 16690541 intron Sep4 - chrX_5_16690001 chrX_16690001 RAL-492 2731 chrX 16785255 16785293 chrX 16785379 16785415 8 124 4.0 3.5 3.8 1.7 160 chrX 16785255 3` UTR CG9609 - chrX 16785335 3` UTR CG9609 - chrX 16785415 3` UTR CG9609 - chrX_8_16785001 chrX_16785001 RAL-492 2732 chrX 16805376 16805420 chrX 16808876 16808914 9 3500 10.5 23.5 17.0 0.5 3538 chrX 16805376 3` UTR CG13005 + chrX 16807145 3` UTR,exon CR44053 -,ppk28 + chrX 16808914 intron CR44053 - chrX_9_16805001 chrX_16805001 RAL-492 2733 chrX 16936003 16936028 chrX 16936441 16936447 jockey 4 433 1.0 4.5 2.8 1.1 444 chrX 16936003 intron CG4928 + chrX 16936225 intron CG4928 + chrX 16936447 intron CG4928 + chrX_4_16935001 chrX_16935001 RAL-492 2734 chrX 17037957 17037996 chrX 17038071 17038110 8 114 2.5 3.0 2.8 2.1 153 chrX 17037957 intron CG45002 - chrX 17038034 intron CG45002 - chrX 17038110 intron CG45002 - chrX_8_17035001 chrX_17035001 RAL-492 2735 chrX 17088188 17088196 chrX 17088785 17088809 5 610 0.0 2.0 1.0 2.5 621 chrX 17088188 intergenic not near genes chrX 17088498 intergenic not near genes chrX 17088809 intergenic not near genes chrX_5_17085001 chrX_17085001 RAL-492 2736 chrX 17195200 17195228 chrX 17200297 17200327 flea 8 5102 3.5 2.0 2.8 2.1 5127 chrX 17195200 3` UTR baz + chrX 17197764 3` UTR baz + chrX 17200327 3` UTR baz + chrX_8_17195001 chrX_17195001 RAL-492 2737 chrX 17229941 17229965 chrX 17230064 17230088 6 122 4.0 2.5 3.2 1.4 147 chrX 17229941 intergenic CG10597 - chrX 17230014 intergenic CG10597 - chrX 17230088 intergenic CG10597 - chrX_6_17230001 chrX_17230001 RAL-492 2738 chrX 17352578 17352619 chrX 17352692 17352742 10 121 0.0 2.0 1.0 5.0 164 chrX 17352578 intergenic not near genes chrX 17352660 intergenic not near genes chrX 17352742 intergenic not near genes chrX_10_17350001 chrX_17350001 RAL-492 2739 chrX 17545474 17545524 chrX 17545569 17545594 10 85 0.0 2.5 1.2 4.5 120 chrX 17545474 intron CG43658 - chrX 17545534 intron CG43658 - chrX 17545594 intron CG43658 - chrX_10_17545001 chrX_17545001 RAL-492 2740 chrX 17546961 17547003 chrX 17547114 17547156 4 153 1.0 3.5 2.2 1.2 195 chrX 17546961 intron CG43658 - chrX 17547058 intron CG43658 - chrX 17547156 intron CG43658 - chrX_4_17545001 chrX_17545001 RAL-492 2741 chrX 17555732 17555780 chrX 17555849 17555878 11 115 2.0 3.0 2.5 3.1 146 chrX 17555732 intron CG43658 - chrX 17555805 intron CG43658 - chrX 17555878 intron CG43658 - chrX_11_17555001 chrX_17555001 RAL-492 2742 chrX 17716563 17716595 chrX 17716672 17716701 4 106 4.5 3.0 3.8 0.8 138 chrX 17716563 intron CG42684 + chrX 17716632 intron CG42684 + chrX 17716701 intron CG42684 + chrX_4_17715001 chrX_17715001 RAL-492 2743 chrX 17766349 17766368 chrX 17766467 17766485 5 117 1.0 7.5 4.2 1.0 136 chrX 17766349 intergenic not near genes chrX 17766417 intergenic not near genes chrX 17766485 intergenic not near genes chrX_5_17765001 chrX_17765001 RAL-492 2744 chrX 17771277 17771329 chrX 17771374 17771420 9 98 1.5 1.5 1.5 3.6 143 chrX 17771277 intron unc-4 + chrX 17771348 intron unc-4 + chrX 17771420 intron unc-4 + chrX_9_17770001 chrX_17770001 RAL-492 2745 chrX 17966588 17966622 chrX 17966698 17966733 5 111 1.0 2.0 1.5 2.0 145 chrX 17966588 intron Sh - chrX 17966660 intron Sh - chrX 17966733 intron Sh - chrX_5_17965001 chrX_17965001 RAL-492 2746 chrX 18122810 18122851 chrX 18122906 18122946 7 95 2.5 4.0 3.2 1.7 136 chrX 18122810 5` UTR CR45606 + chrX 18122878 5` UTR CR45606 + chrX 18122946 intergenic CR45606 + chrX_7_18120001 chrX_18120001 RAL-492 2747 chrX 18177007 18177037 chrX 18177120 18177144 7 112 1.5 0.5 1.0 3.5 137 chrX 18177007 intergenic not near genes chrX 18177076 intergenic not near genes chrX 18177144 intergenic Frq2 + chrX_7_18175001 chrX_18175001 RAL-492 2748 chrX 18194070 18194097 chrX 18194614 18194652 BS 11 552 3.5 5.5 4.5 2.0 582 chrX 18194070 intron Frq2 + chrX 18194361 intron Frq2 + chrX 18194652 intron Frq2 + chrX_11_18190001 chrX_18190001 RAL-492 2749 chrX 18427360 18427405 chrX 18427791 18427836 17 431 3.5 2.5 3.0 4.2 476 chrX 18427360 intergenic CG42323 + chrX 18427598 intergenic not near genes chrX 18427836 intergenic not near genes chrX_17_18425001 chrX_18425001 RAL-492 2750 chrX 18429479 18429519 chrX 18434806 18434849 Transpac 12 5330 2.5 4.0 3.2 2.9 5370 chrX 18429479 intergenic not near genes chrX 18432164 intergenic not near genes chrX 18434849 intergenic not near genes chrX_12_18430001 chrX_18430001 RAL-492 2751 chrX 18558778 18558804 chrX 18558872 18558905 9 100 1.5 5.5 3.5 2.0 127 chrX 18558778 intron Bx + chrX 18558842 intron Bx + chrX 18558905 intron Bx + chrX_9_18555001 chrX_18555001 RAL-492 2752 chrX 12946234 12946235 chrX 18572525 18572527 6 5626291 6.5 4.5 5.5 0.9 5626293 chrX 12946234 3` UTR fne + chrX 15759380 intron Graf - chrX 18572527 intergenic not near genes chrX_6_15755001 chrX_15755001 RAL-492 2753 chrX 18574780 18574819 chrX 18574880 18574919 9 98 1.0 1.0 1.0 4.5 139 chrX 18574780 intergenic not near genes chrX 18574850 intergenic not near genes chrX 18574919 intergenic not near genes chrX_9_18570001 chrX_18570001 RAL-492 2754 chrX 18644996 18645046 chrX 18645114 18645161 14 117 2.0 2.0 2.0 4.7 165 chrX 18644996 intron Rip11 - chrX 18645078 intron Rip11 - chrX 18645161 intron Rip11 - chrX_14_18645001 chrX_18645001 RAL-492 2755 chrX 18698829 18698851 chrX 18698965 18698974 8 134 5.5 5.5 5.5 1.2 145 chrX 18698829 intergenic not near genes chrX 18698902 intergenic not near genes chrX 18698974 intergenic not near genes chrX_8_18695001 chrX_18695001 RAL-492 2756 chrX 18754318 18754342 chrX 18758005 18758031 297 4 3687 3.5 3.5 3.5 0.9 3713 chrX 18754318 intergenic not near genes chrX 18756174 intergenic not near genes chrX 18758031 intergenic not near genes chrX_4_18755001 chrX_18755001 RAL-492 2757 chrX 18764282 18764330 chrX 18764451 18764453 12 161 1.0 4.0 2.5 3.4 171 chrX 18764282 intergenic CCKLR-17D3 - chrX 18764368 intergenic CCKLR-17D3 - chrX 18764453 intergenic CCKLR-17D3 - chrX_12_18760001 chrX_18760001 RAL-492 2758 chrX 18774431 18774469 chrX 18774536 18774574 14 102 3.5 6.0 4.8 2.4 143 chrX 18774431 intergenic CCKLR-17D3 - chrX 18774502 intergenic CCKLR-17D3 - chrX 18774574 intergenic not near genes chrX_14_18770001 chrX_18770001 RAL-492 2759 chrX 18774470 18774470 chrX 18774533 18774574 4 89 3.5 6.0 4.8 0.7 104 chrX 18774470 intergenic CCKLR-17D3 - chrX 18774522 intergenic CCKLR-17D3 - chrX 18774574 intergenic not near genes chrX_4_18770001 chrX_18770001 RAL-492 2760 chrX 18957079 18957100 chrX 18965731 18965782 roo 4 8671 2.0 0.0 1.0 2.0 8703 chrX 18957079 intron CG43759 + chrX 18961430 intron CG43759 + chrX 18965782 intron CG43759 + chrX_4_18960001 chrX_18960001 RAL-492 2761 chrX 19014347 19014391 chrX 19014443 19014490 10 93 4.0 5.0 4.5 1.8 143 chrX 19014347 intron CG43759 + chrX 19014418 intron CG43759 + chrX 19014490 intron CG43759 + chrX_10_19010001 chrX_19010001 RAL-492 2762 chrX 19060391 19060433 chrX 19065195 19065237 Doc 14 4804 3.0 3.5 3.2 3.3 4846 chrX 19060391 intron CG14190 + chrX 19062814 intron CG14190 + chrX 19065237 intron CG14190 + chrX_14_19060001 chrX_19060001 RAL-492 2763 chrX 19073669 19073690 chrX 19073776 19073795 5 106 2.5 1.0 1.8 1.8 126 chrX 19073669 intergenic not near genes chrX 19073732 intergenic not near genes chrX 19073795 intergenic not near genes chrX_5_19070001 chrX_19070001 RAL-492 2764 chrX 19099633 19099684 chrX 19099736 19099787 18 102 4.0 2.5 3.2 4.3 154 chrX 19099633 intergenic not near genes chrX 19099710 intergenic not near genes chrX 19099787 intergenic not near genes chrX_18_19095001 chrX_19095001 RAL-492 2765 chrX 19124426 19124461 chrX 19124532 19124570 8 107 0.5 0.5 0.5 5.3 144 chrX 19124426 intergenic CG15882 - chrX 19124498 intergenic CG15882 - chrX 19124570 intergenic CG15882 -,tgy - chrX_8_19120001 chrX_19120001 RAL-492 2766 chrX 19125671 19125719 chrX 19125819 19125867 16 145 5.5 3.0 4.2 3.1 196 chrX 19125671 intron tgy - chrX 19125769 intron tgy - chrX 19125867 intron tgy - chrX_16_19125001 chrX_19125001 RAL-492 2767 chrX 19131976 19132001 chrX 19132065 19132104 9 96 3.0 9.0 6.0 1.3 128 chrX 19131976 intergenic not near genes chrX 19132040 intergenic not near genes chrX 19132104 intergenic not near genes chrX_9_19130001 chrX_19130001 RAL-492 2768 chrX 19136533 19136584 chrX 19143473 19143523 412 17 6937 3.0 3.0 3.0 4.2 6990 chrX 19136533 intergenic not near genes chrX 19140028 intergenic not near genes chrX 19143523 3` UTR RhoGAP18B - chrX_17_19140001 chrX_19140001 RAL-492 2769 chrX 19170587 19170602 chrX 19170669 19170696 7 89 8.0 8.5 8.2 0.8 109 chrX 19170587 5` UTR Inx5 - chrX 19170642 5` UTR Inx5 - chrX 19170696 5` UTR Inx5 - chrX_7_19170001 chrX_19170001 RAL-492 2770 chrX 19176197 19176234 chrX 19176301 19176327 9 95 3.5 3.5 3.5 2.0 130 chrX 19176197 3` UTR CG7556 - chrX 19176262 3` UTR CG7556 - chrX 19176327 3` UTR CG7556 - chrX_9_19175001 chrX_19175001 RAL-492 2771 chrX 19309658 19309667 chrX 19309735 19309765 4 88 10.0 5.5 7.8 0.5 107 chrX 19309658 intergenic not near genes chrX 19309712 intergenic not near genes chrX 19309765 intergenic not near genes chrX_4_19305001 chrX_19305001 RAL-492 2772 chrX 19324666 19324699 chrX 19325134 19325167 6 468 3.5 2.5 3.0 1.5 501 chrX 19324666 intergenic not near genes chrX 19324916 intergenic not near genes chrX 19325167 intergenic not near genes chrX_6_19320001 chrX_19320001 RAL-492 2773 chrX 19356969 19357023 chrX 19358430 19358502 NOF 8 1463 2.5 0.0 1.2 3.6 1533 chrX 19356969 intron kek5 + chrX 19357736 intron kek5 + chrX 19358502 intron kek5 + chrX_8_19355001 chrX_19355001 RAL-492 2774 chrX 19380150 19380182 chrX 19380411 19380441 pogo 10 259 6.0 3.0 4.5 1.8 291 chrX 19380150 intron kek5 + chrX 19380296 intron kek5 + chrX 19380441 intron kek5 + chrX_10_19380001 chrX_19380001 RAL-492 2775 chrX 19384812 19384850 chrX 19384914 19384954 6 99 4.5 2.5 3.5 1.3 142 chrX 19384812 intron kek5 + chrX 19384883 intron kek5 + chrX 19384954 intron kek5 + chrX_6_19380001 chrX_19380001 RAL-492 2776 chrX 16983076 16983076 chrX 19404963 19404965 7 2421887 7.5 11.5 9.5 0.7 2421889 chrX 16983076 intron CG45002 - chrX 18194020 intron Frq2 + chrX 19404965 intron kek5 + chrX_7_18190001 chrX_18190001 RAL-492 2777 chrX 19472137 19472155 chrX 19472700 19472725 jockey 6 562 1.5 8.5 5.0 1.0 588 chrX 19472137 intergenic kek5 + chrX 19472431 intergenic not near genes chrX 19472725 intergenic not near genes chrX_6_19470001 chrX_19470001 RAL-492 2778 chrX 19541408 19541427 chrX 19541508 19541527 5 100 1.5 3.0 2.2 1.6 119 chrX 19541408 intron CG32532 - chrX 19541468 intron CG32532 - chrX 19541527 intron CG32532 - chrX_5_19540001 chrX_19540001 RAL-492 2779 chrX 19595712 19595734 chrX 19595821 19595843 5 109 1.5 4.0 2.8 1.3 131 chrX 19595712 intergenic CG14205 + chrX 19595778 intergenic CG14205 + chrX 19595843 intergenic CG14205 + chrX_5_19595001 chrX_19595001 RAL-492 2780 chrX 19662022 19662057 chrX 19662265 19662299 8 242 0.5 4.5 2.5 2.3 277 chrX 19662022 intron CG14223 - chrX 19662160 intron CG14223 - chrX 19662299 intron CG14223 - chrX_8_19660001 chrX_19660001 RAL-492 2781 chrX 19689388 19689432 chrX 19689485 19689526 10 97 3.5 2.5 3.0 2.5 138 chrX 19689388 intergenic Mer -,CG14227 - chrX 19689457 intergenic Mer - chrX 19689526 intergenic Mer - chrX_10_19685001 chrX_19685001 RAL-492 2782 chrX 19693733 19693772 chrX 19693836 19693877 6 105 3.0 0.0 1.5 2.4 144 chrX 19693733 intergenic Mer -,CG14229 - chrX 19693805 intergenic CG14229 -,Mer - chrX 19693877 intergenic CG14229 -,Mer - chrX_6_19690001 chrX_19690001 RAL-492 2783 chrX 19710055 19710096 chrX 19711860 19711889 S-element 9 1802 7.0 5.0 6.0 1.3 1834 chrX 19710055 intron meso18E - chrX 19710972 intron meso18E - chrX 19711889 intron meso18E - chrX_9_19710001 chrX_19710001 RAL-492 2784 chrX 19756106 19756142 chrX 19756212 19756237 5 103 7.5 2.0 4.8 0.9 131 chrX 19756106 intron Pmp70 + chrX 19756172 intron Pmp70 + chrX 19756237 intron Pmp70 + chrX_5_19755001 chrX_19755001 RAL-492 2785 chrX 19773344 19773355 chrX 19773476 19773492 5 135 5.5 4.0 4.8 0.9 148 chrX 19773344 intron vfl - chrX 19773418 intron vfl - chrX 19773492 intron vfl - chrX_5_19770001 chrX_19770001 RAL-492 2786 chrX 19773361 19773384 chrX 19773470 19773494 4 113 3.0 3.0 3.0 1.0 133 chrX 19773361 intron vfl - chrX 19773428 intron vfl - chrX 19773494 intron vfl - chrX_4_19770001 chrX_19770001 RAL-492 2787 chrX 19822830 19822864 chrX 19822995 19823051 15 176 2.0 4.0 3.0 3.8 221 chrX 19822830 intergenic not near genes chrX 19822940 intergenic skpE - chrX 19823051 intergenic skpE - chrX_15_19820001 chrX_19820001 RAL-492 2788 chrX 19866019 19866072 chrX 19866121 19866173 13 91 2.0 5.0 3.5 2.9 154 chrX 19866019 intergenic Hers +,CG15618 - chrX 19866096 intergenic Hers + chrX 19866173 5` UTR Hers + chrX_13_19865001 chrX_19865001 RAL-492 2789 chrX 19881444 19881485 chrX 19881543 19881586 13 98 2.5 2.0 2.2 4.1 142 chrX 19881444 intron Hers + chrX 19881515 intron Hers + chrX 19881586 intron Hers + chrX_13_19880001 chrX_19880001 RAL-492 2790 chrX 19884088 19884115 chrX 19884171 19884184 4 74 4.0 3.0 3.5 0.9 96 chrX 19884088 intron Hers + chrX 19884136 intron Hers + chrX 19884184 intron Hers + chrX_4_19880001 chrX_19880001 RAL-492 2791 chrX 19897364 19897407 chrX 19897460 19897503 7 96 3.0 4.0 3.5 1.6 139 chrX 19897364 intron Hers + chrX 19897434 intron Hers + chrX 19897503 intron Hers + chrX_7_19895001 chrX_19895001 RAL-492 2792 chrX 19971803 19971815 chrX 19971900 19971911 4 97 6.0 8.5 7.2 0.5 108 chrX 19971803 intergenic not near genes chrX 19971857 intergenic not near genes chrX 19971911 intergenic not near genes chrX_4_19970001 chrX_19970001 RAL-492 2793 chrX 19981994 19982023 chrX 19982102 19982131 4 103 1.5 3.0 2.2 1.2 137 chrX 19981994 intergenic not near genes chrX 19982062 intergenic not near genes chrX 19982131 intergenic not near genes chrX_4_19980001 chrX_19980001 RAL-492 2794 chrX 19983847 19983894 chrX 19983947 19983994 7 100 0.0 2.5 1.2 3.2 147 chrX 19983847 intergenic not near genes chrX 19983920 intergenic not near genes chrX 19983994 intergenic not near genes chrX_7_19980001 chrX_19980001 RAL-492 2795 chrX 19992415 19992429 chrX 19992495 19992501 4 80 4.0 4.5 4.2 0.8 86 chrX 19992415 intergenic not near genes chrX 19992458 intergenic not near genes chrX 19992501 intergenic not near genes chrX_4_19990001 chrX_19990001 RAL-492 2796 chrX 20016212 20016257 chrX 20016325 20016341 10 108 1.0 1.0 1.0 5.0 129 chrX 20016212 intron Dop2R - chrX 20016276 intron Dop2R - chrX 20016341 intron Dop2R - chrX_10_20015001 chrX_20015001 RAL-492 2797 chrX 20041517 20041567 chrX 20041617 20041667 8 100 2.0 2.0 2.0 2.7 150 chrX 20041517 intron Dop2R - chrX 20041592 intron Dop2R - chrX 20041667 intron Dop2R - chrX_8_20040001 chrX_20040001 RAL-492 2798 chrX 20271488 20271528 chrX 20271600 20271612 6 107 3.5 0.0 1.8 2.1 124 chrX 20271488 intergenic not near genes chrX 20271550 intergenic not near genes chrX 20271612 intergenic not near genes chrX_6_20270001 chrX_20270001 RAL-492 2799 chrX 20312866 20312885 chrX 20312964 20312983 9 98 9.0 3.0 6.0 1.3 117 chrX 20312866 intron CG1504 - chrX 20312924 intron CG1504 - chrX 20312983 intron CG1504 - chrX_9_20310001 chrX_20310001 RAL-492 2800 chrX 20312887 20312909 chrX 20312958 20313007 9 95 3.5 2.5 3.0 2.2 120 chrX 20312887 intron CG1504 - chrX 20312947 intron CG1504 - chrX 20313007 intron CG1504 - chrX_9_20310001 chrX_20310001 RAL-492 2801 chrX 20319496 20319525 chrX 20319596 20319619 4 98 1.0 3.5 2.2 1.2 123 chrX 20319496 intron CG1504 - chrX 20319558 intron CG1504 - chrX 20319619 intron CG1504 - chrX_4_20315001 chrX_20315001 RAL-492 2802 chrX 20319526 20319543 chrX 20319589 20319618 5 85 1.0 2.5 1.8 1.8 92 chrX 20319526 intron CG1504 - chrX 20319572 intron CG1504 - chrX 20319618 intron CG1504 - chrX_5_20315001 chrX_20315001 RAL-492 2803 chrX 20362853 20362876 chrX 20362950 20362970 8 94 2.5 0.0 1.2 3.6 117 chrX 20362853 intergenic not near genes chrX 20362912 intergenic not near genes chrX 20362970 intergenic not near genes chrX_8_20360001 chrX_20360001 RAL-492 2804 chrX 20374071 20374126 chrX 20374167 20374214 7 92 1.0 2.5 1.8 2.5 143 chrX 20374071 intergenic not near genes chrX 20374142 intergenic not near genes chrX 20374214 intergenic not near genes chrX_7_20370001 chrX_20370001 RAL-492 2805 chrX 20377325 20377341 chrX 20378806 20378828 hobo 7 1484 7.5 5.5 6.5 0.9 1503 chrX 20377325 intergenic not near genes chrX 20378076 intergenic not near genes chrX 20378828 intergenic not near genes chrX_7_20375001 chrX_20375001 RAL-492 2806 chrX 20384961 20384971 chrX 20385466 20385472 4 504 0.0 1.5 0.8 2.2 511 chrX 20384961 intergenic not near genes chrX 20385216 intergenic not near genes chrX 20385472 intergenic not near genes chrX_4_20385001 chrX_20385001 RAL-492 2807 chrX 20435431 20435482 chrX 20435540 20435591 13 106 2.5 2.0 2.2 4.1 160 chrX 20435431 intron CG1695 + chrX 20435511 intron CG1695 + chrX 20435591 intron CG1695 + chrX_13_20435001 chrX_20435001 RAL-492 2808 chrX 20575136 20575186 chrX 20575234 20575283 19 95 3.0 1.5 2.2 5.9 147 chrX 20575136 intergenic CG42580 + chrX 20575210 intergenic not near genes chrX 20575283 intergenic not near genes chrX_19_20575001 chrX_20575001 RAL-492 2809 chrX 20587425 20587430 chrX 20587733 20587778 7 315 30.5 30.5 30.5 0.2 353 chrX 20587425 intergenic not near genes chrX 20587602 intergenic not near genes chrX 20587778 intergenic not near genes chrX_7_20585001 chrX_20585001 RAL-492 2810 chrX 20635414 20635446 chrX 20635599 20635631 7 184 2.0 5.0 3.5 1.6 217 chrX 20635414 intergenic not near genes chrX 20635522 intergenic not near genes chrX 20635631 intergenic not near genes chrX_7_20635001 chrX_20635001 RAL-492 2811 chrX 20703870 20703913 chrX 20703985 20704027 9 114 4.5 3.0 3.8 1.9 157 chrX 20703870 intergenic not near genes chrX 20703948 intergenic not near genes chrX 20704027 intergenic not near genes chrX_9_20700001 chrX_20700001 RAL-492 2812 chrX 20774565 20774591 chrX 20774668 20774694 4 103 3.5 3.0 3.2 1.0 129 chrX 20774565 intron shakB - chrX 20774630 intron shakB - chrX 20774694 intron shakB - chrX_4_20770001 chrX_20770001 RAL-492 2813 chrX 20836723 20836750 chrX 20844334 20844372 roo 6 7619 2.0 4.5 3.2 1.4 7649 chrX 20836723 intron shakB - chrX 20840548 intron shakB - chrX 20844372 intron shakB - chrX_6_20840001 chrX_20840001 RAL-492 2814 chrX 20915041 20915074 chrX 20915232 20915239 7 187 4.0 5.5 4.8 1.2 198 chrX 20915041 intron shakB - chrX 20915140 intron shakB - chrX 20915239 intron shakB - chrX_7_20915001 chrX_20915001 RAL-492 2815 chrX 20940703 20940746 chrX 20942192 20942211 hobo 14 1485 4.5 4.0 4.2 2.7 1508 chrX 20940703 intergenic not near genes chrX 20941457 intergenic not near genes chrX 20942211 intergenic not near genes chrX_14_20940001 chrX_20940001 RAL-492 2816 chrX 20974178 20974206 chrX 20974381 20974410 6 204 2.0 4.0 3.0 1.5 232 chrX 20974178 intergenic not near genes chrX 20974294 intergenic not near genes chrX 20974410 intergenic not near genes chrX_6_20970001 chrX_20970001 RAL-492 2817 chrX 21055674 21055726 chrX 21055769 21055822 7 89 3.0 3.5 3.2 1.7 148 chrX 21055674 intron bves + chrX 21055748 intron bves + chrX 21055822 intron bves + chrX_7_21055001 chrX_21055001 RAL-492 2818 chrX 21061856 21061897 chrX 21062361 21062401 roo 6 501 0.5 0.5 0.5 4.0 545 chrX 21061856 intron bves + chrX 21062128 intron bves + chrX 21062401 intron,3` UTR bves +,CG32512 - chrX_6_21060001 chrX_21060001 RAL-492 2819 chrX 21076308 21076352 chrX 21076407 21076451 5 99 2.5 0.0 1.2 2.3 143 chrX 21076308 intron bves + chrX 21076380 intron bves + chrX 21076451 intron bves + chrX_5_21075001 chrX_21075001 RAL-492 2820 chrX 21086135 21086162 chrX 21087175 21087203 jockey 8 1046 5.0 6.0 5.5 1.2 1068 chrX 21086135 intergenic not near genes chrX 21086669 intergenic not near genes chrX 21087203 intergenic not near genes chrX_8_21085001 chrX_21085001 RAL-492 2821 chrX 21088046 21088075 chrX 21088178 21088216 4 143 2.0 0.5 1.2 1.8 170 chrX 21088046 intergenic not near genes chrX 21088131 intergenic not near genes chrX 21088216 intergenic not near genes chrX_4_21085001 chrX_21085001 RAL-492 2822 chrX 21253274 21253299 chrX 21253364 21253394 6 92 4.5 7.5 6.0 0.9 120 chrX 21253274 intron CG32521 - chrX 21253334 intron CG32521 - chrX 21253394 intron CG32521 - chrX_6_21250001 chrX_21250001 RAL-492 2823 chrX 21255475 21255507 chrX 21255619 21255626 6 138 4.0 0.5 2.2 1.9 151 chrX 21255475 intron CG32521 - chrX 21255550 intron CG32521 - chrX 21255626 intron CG32521 - chrX_6_21255001 chrX_21255001 RAL-492 2824 chrX 21328120 21328143 chrX 21328251 21328274 4 130 1.0 3.5 2.2 1.2 154 chrX 21328120 3` UTR CG1486 + chrX 21328197 intergenic CG1486 +,tty - chrX 21328274 intergenic CG1486 +,tty - chrX_4_21325001 chrX_21325001 RAL-492 2825 chrX 21345104 21345144 chrX 21345203 21345209 17 95 3.0 1.5 2.2 5.3 105 chrX 21345104 intergenic fliI +,dod + chrX 21345156 intergenic fliI +,dod + chrX 21345209 intergenic fliI +,dod + chrX_17_21345001 chrX_21345001 RAL-492 2826 chrX 21358054 21358093 chrX 21358154 21358193 9 99 3.0 1.0 2.0 3.0 139 chrX 21358054 intergenic sol +,Sep1 + chrX 21358124 intergenic Sep1 +,sol + chrX 21358193 intergenic Sep1 +,sol + chrX_9_21355001 chrX_21355001 RAL-492 2827 chrX 21419206 21419243 chrX 21419311 21419344 6 104 1.0 5.0 3.0 1.5 138 chrX 21419206 intergenic not near genes chrX 21419275 intergenic not near genes chrX 21419344 intergenic not near genes chrX_6_21415001 chrX_21415001 RAL-492 2828 chrX 21419786 21419811 chrX 21419883 21419899 15 90 3.5 8.5 6.0 2.1 113 chrX 21419786 intergenic not near genes chrX 21419842 intergenic not near genes chrX 21419899 intergenic not near genes chrX_15_21415001 chrX_21415001 RAL-492 2829 chrX 21419812 21419831 chrX 21419874 21419921 6 84 4.0 7.5 5.8 0.9 109 chrX 21419812 intergenic not near genes chrX 21419866 intergenic not near genes chrX 21419921 intergenic not near genes chrX_6_21415001 chrX_21415001 RAL-492 2830 chrX 21455202 21455232 chrX 21455396 21455439 4 204 1.0 0.0 0.5 2.7 237 chrX 21455202 intron CG42343 - chrX 21455320 intron CG42343 - chrX 21455439 intron CG42343 - chrX_4_21455001 chrX_21455001 RAL-492 2831 chrX 21458683 21458703 chrX 21464138 21464159 Ivk 6 5455 6.0 7.0 6.5 0.8 5476 chrX 21458683 intergenic not near genes chrX 21461421 intergenic not near genes chrX 21464159 intergenic not near genes chrX_6_21460001 chrX_21460001 RAL-492 2832 chrX 21466998 21467028 chrX 21467102 21467132 5 104 3.5 3.0 3.2 1.2 134 chrX 21466998 intergenic CR45507 - chrX 21467065 intergenic CR45507 - chrX 21467132 3` UTR CR45507 - chrX_5_21465001 chrX_21465001 RAL-492 2833 chrX 21581536 21581574 chrX 21581637 21581673 6 100 1.5 0.0 0.8 3.3 137 chrX 21581536 intergenic not near genes chrX 21581604 intergenic not near genes chrX 21581673 intergenic not near genes chrX_6_21580001 chrX_21580001 RAL-492 2834 chrX 21624892 21624938 chrX 21625002 21625048 7 109 2.5 3.0 2.8 1.8 156 chrX 21624892 3` UTR DIP1 - chrX 21624970 3` UTR DIP1 - chrX 21625048 3` UTR DIP1 - chrX_7_21620001 chrX_21620001 RAL-492 2835 chrX 21631062 21631111 chrX 21631167 21631208 6 103 0.5 3.5 2.0 2.0 146 chrX 21631062 intron CR44712 + chrX 21631135 intron CR44712 + chrX 21631208 5` UTR CR44712 + chrX_6_21630001 chrX_21630001 RAL-492 2836 chrX 21668242 21668282 chrX 21668346 21668387 12 105 5.5 0.5 3.0 3.0 145 chrX 21668242 intergenic not near genes chrX 21668314 intergenic not near genes chrX 21668387 intergenic not near genes chrX_12_21665001 chrX_21665001 RAL-492 2837 chrX 22564574 22564585 chrX 22575128 22575137 jockey 4 10552 14.0 6.0 10.0 0.4 10563 chrX 22564574 intergenic not near genes chrX 22569856 intergenic not near genes chrX 22575137 intergenic not near genes chrX_4_22565001 chrX_22565001 RAL-492 2838 chrX 22677279 22677326 chrX 22677508 22677551 12 228 2.0 1.5 1.8 4.3 272 chrX 22677279 intron CR44997 + chrX 22677415 intron CR44997 + chrX 22677551 intron CR44997 + chrX_12_22675001 chrX_22675001 RAL-492 2839 chrX 22697481 22697521 chrX 22701798 22701838 Juan 14 4316 6.0 7.0 6.5 1.9 4357 chrX 22697481 intron CR44997 + chrX 22699660 intron CR44997 + chrX 22701838 intron CR44997 + chrX_14_22695001 chrX_22695001 RAL-492 2840 chrX 22771501 22771508 chrX 22774812 22774819 297 4 3310 9.5 6.5 8.0 0.4 3318 chrX 22771501 intron CR44997 + chrX 22773160 intron CR44997 + chrX 22774819 intron CR44997 + chrX_4_22770001 chrX_22770001 RAL-492 2841 chrX 22784063 22784100 chrX 22784166 22784203 7 103 2.0 1.5 1.8 2.5 140 chrX 22784063 intron CR44997 + chrX 22784133 intron CR44997 + chrX 22784203 intron CR44997 + chrX_7_22780001 chrX_22780001 RAL-492 2842 chrX 22798772 22798790 chrX 22798909 22798926 4 136 2.0 6.5 4.2 0.8 154 chrX 22798772 intergenic not near genes chrX 22798849 intergenic not near genes chrX 22798926 intergenic not near genes chrX_4_22795001 chrX_22795001 RAL-492 2843 chrX 22811977 22811998 chrX 22816770 22816791 F-element 8 4793 7.5 3.0 5.2 1.3 4814 chrX 22811977 intergenic CG12446 - chrX 22814384 intergenic not near genes chrX 22816791 intergenic not near genes chrX_8_22810001 chrX_22810001 RAL-492 2844 chrX 22824219 22824435 chrX 22824363 22824588 8 149 4.0 3.5 3.8 1.7 369 chrX 22824219 intergenic fog - chrX 22824404 3` UTR fog - chrX 22824588 3` UTR fog - chrX_8_22820001 chrX_22820001 RAL-492 2845 chrX 22987094 22987123 chrX 22989772 22989802 Burdock 4 2679 2.0 1.0 1.5 1.6 2708 chrX 22987094 intron,intron stnA -,stnB - chrX 22988448 intron,intron stnA -,stnB - chrX 22989802 intron,intron stnA -,stnB - chrX_4_22985001 chrX_22985001 RAL-492 2846 chrX 22996293 22996336 chrX 23003546 23003560 roo 9 7247 5.0 4.5 4.8 1.6 7267 chrX 22996293 intron,intron stnA -,stnB - chrX 22999926 intron,intron stnA -,stnB - chrX 23003560 intron,intron stnA -,stnB - chrX_9_22995001 chrX_22995001 RAL-492 2847 chrY 975618 975817 chrY 975723 975910 15 102 294.5 307.0 300.8 0.0 292 chrY 975618 intergenic not near genes chrY 975764 intergenic not near genes chrY 975910 intergenic not near genes chrY_15_975001 chrY_975001 RAL-492 2848 chrY 2761734 2761748 chrY 2761835 2761842 4 98 9.0 8.5 8.8 0.4 108 chrY 2761734 intergenic not near genes chrY 2761788 intergenic not near genes chrY 2761842 intergenic not near genes chrY_4_2760001 chrY_2760001 RAL-492 2849 chrY 3664969 3665003 chrY 3665093 3665127 5 124 0.5 0.0 0.2 4.2 158 chrY 3664969 intergenic CG40948 + chrY 3665048 intergenic CG40948 + chrY 3665127 intergenic not near genes chrY_5_3665001 chrY_3665001 RAL-492 2850 chrY 3666437 3666458 chrY 3666598 3666628 6 168 1.0 2.0 1.5 2.4 191 chrY 3666437 intergenic not near genes chrY 3666532 intergenic not near genes chrY 3666628 intergenic not near genes chrY_6_3665001 chrY_3665001 RAL-492