SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 47458 47488 chr2L 52563 52593 jockey 8 5105 4.0 3.5 3.8 1.7 5135 chr2L 47458 intron Cda5 - chr2L 50026 intron Cda5 - chr2L 52593 intron Cda5 - chr2L_8_50001 chr2L_50001 RAL-45 2 chr2L 179461 179470 chr2L 179544 179553 5 83 6.0 0.5 3.2 1.2 92 chr2L 179461 intron spen + chr2L 179507 intron spen + chr2L 179553 intron spen + chr2L_5_175001 chr2L_175001 RAL-45 3 chr2L 297684 297719 chr2L 297784 297819 9 100 0.5 1.5 1.0 4.5 135 chr2L 297684 intergenic Pi3K21B +,Hop + chr2L 297752 intergenic Pi3K21B +,Hop + chr2L 297819 intergenic Pi3K21B +,Hop + chr2L_9_295001 chr2L_295001 RAL-45 4 chr2L 374028 374054 chr2L 374138 374164 5 104 0.0 0.5 0.2 4.2 136 chr2L 374028 intergenic not near genes chr2L 374096 intergenic not near genes chr2L 374164 intergenic not near genes chr2L_5_370001 chr2L_370001 RAL-45 5 chr2L 525261 525279 chr2L 525344 525362 7 83 2.5 3.0 2.8 1.8 101 chr2L 525261 intron ush + chr2L 525312 intron ush + chr2L 525362 intron ush + chr2L_7_525001 chr2L_525001 RAL-45 6 chr2L 590627 590654 chr2L 590728 590755 7 100 3.5 5.5 4.5 1.3 128 chr2L 590627 intron Gsc - chr2L 590691 intron Gsc - chr2L 590755 intron Gsc - chr2L_7_590001 chr2L_590001 RAL-45 7 chr2L 630308 630323 chr2L 630400 630415 4 91 1.5 3.0 2.2 1.2 107 chr2L 630308 intergenic not near genes chr2L 630362 intergenic not near genes chr2L 630415 intergenic not near genes chr2L_4_630001 chr2L_630001 RAL-45 8 chr2L 686916 686948 chr2L 695956 695986 roo 8 9039 4.0 3.0 3.5 1.8 9070 chr2L 686916 intron ds - chr2L 691451 intron ds - chr2L 695986 intron ds - chr2L_8_690001 chr2L_690001 RAL-45 9 chr2L 770473 770492 chr2L 772244 772273 Bari1 7 1779 3.0 1.5 2.2 2.2 1800 chr2L 770473 intergenic not near genes chr2L 771373 intergenic not near genes chr2L 772273 intergenic CR44614 + chr2L_7_770001 chr2L_770001 RAL-45 10 chr2L 795920 795945 chr2L 796061 796086 5 141 0.5 0.0 0.2 4.2 166 chr2L 795920 intergenic not near genes chr2L 796003 intergenic not near genes chr2L 796086 intergenic not near genes chr2L_5_795001 chr2L_795001 RAL-45 11 chr2L 844941 844953 chr2L 845027 845040 7 86 5.5 2.5 4.0 1.4 99 chr2L 844941 intron drongo - chr2L 844990 intron drongo - chr2L 845040 intron drongo - chr2L_7_840001 chr2L_840001 RAL-45 12 chr2L 931632 931666 chr2L 931710 931745 6 76 4.5 5.0 4.8 1.0 113 chr2L 931632 intron CG4341 + chr2L 931688 intron CG4341 + chr2L 931745 intron CG4341 + chr2L_6_930001 chr2L_930001 RAL-45 13 chr2L 964554 964572 chr2L 964637 964656 4 84 2.0 3.5 2.8 1.1 102 chr2L 964554 intergenic not near genes chr2L 964605 intergenic not near genes chr2L 964656 intergenic not near genes chr2L_4_960001 chr2L_960001 RAL-45 14 chr2L 976878 976911 chr2L 984514 984547 roo 6 7636 0.5 0.5 0.5 4.0 7669 chr2L 976878 intergenic not near genes chr2L 980712 intergenic not near genes chr2L 984547 intergenic not near genes chr2L_6_980001 chr2L_980001 RAL-45 15 chr2L 1023019 1023037 chr2L 1023099 1023117 10 80 4.5 4.0 4.2 1.9 98 chr2L 1023019 intron IA-2 - chr2L 1023068 intron IA-2 - chr2L 1023117 intron IA-2 - chr2L_10_1020001 chr2L_1020001 RAL-45 16 chr2L 1035565 1035590 chr2L 1035641 1035667 6 77 2.5 5.5 4.0 1.2 102 chr2L 1035565 intron IA-2 - chr2L 1035616 intron IA-2 - chr2L 1035667 intron IA-2 - chr2L_6_1035001 chr2L_1035001 RAL-45 17 chr2L 1066099 1066123 chr2L 1066180 1066204 4 81 4.5 3.5 4.0 0.8 105 chr2L 1066099 intron S - chr2L 1066152 intron S - chr2L 1066204 intron S - chr2L_4_1065001 chr2L_1065001 RAL-45 18 chr2L 1121131 1121163 chr2L 1121217 1121250 10 85 2.0 2.0 2.0 3.3 119 chr2L 1121131 intron Pino - chr2L 1121190 intron Pino - chr2L 1121250 intron Pino - chr2L_10_1120001 chr2L_1120001 RAL-45 19 chr2L 1220135 1220162 chr2L 1227601 1227628 blood 8 7466 2.0 1.5 1.8 2.9 7493 chr2L 1220135 intron CG42329 + chr2L 1223882 intron CG42329 + chr2L 1227628 intron CG42329 + chr2L_8_1220001 chr2L_1220001 RAL-45 20 chr2L 1261251 1261260 chr2L 1261313 1261341 4 72 0.0 2.5 1.2 1.8 90 chr2L 1261251 intron robo3 + chr2L 1261296 intron robo3 + chr2L 1261341 intron robo3 + chr2L_4_1260001 chr2L_1260001 RAL-45 21 chr2L 1390235 1390261 chr2L 1390490 1390517 6 256 4.0 1.0 2.5 1.7 282 chr2L 1390235 intron lea - chr2L 1390376 intron lea - chr2L 1390517 intron lea - chr2L_6_1390001 chr2L_1390001 RAL-45 22 chr2L 1464160 1464175 chr2L 1464392 1464402 4 231 4.5 2.0 3.2 1.0 242 chr2L 1464160 intergenic not near genes chr2L 1464281 intergenic not near genes chr2L 1464402 intergenic not near genes chr2L_4_1460001 chr2L_1460001 RAL-45 23 chr2L 1467508 1467533 chr2L 1467588 1467613 7 80 1.0 6.5 3.8 1.5 105 chr2L 1467508 intergenic not near genes chr2L 1467560 intergenic not near genes chr2L 1467613 intergenic not near genes chr2L_7_1465001 chr2L_1465001 RAL-45 24 chr2L 1541620 1541655 chr2L 1541729 1541764 4 108 2.0 3.0 2.5 1.1 144 chr2L 1541620 intergenic not near genes chr2L 1541692 intergenic not near genes chr2L 1541764 intergenic not near genes chr2L_4_1540001 chr2L_1540001 RAL-45 25 chr2L 1570685 1570708 chr2L 1573557 1573580 F-element 4 2872 1.5 0.5 1.0 2.0 2895 chr2L 1570685 intron haf + chr2L 1572132 intron haf + chr2L 1573580 intron haf + chr2L_4_1570001 chr2L_1570001 RAL-45 26 chr2L 1580327 1580340 chr2L 1580534 1580547 4 207 0.0 1.5 0.8 2.2 220 chr2L 1580327 intron haf + chr2L 1580437 intron haf + chr2L 1580547 intron haf + chr2L_4_1580001 chr2L_1580001 RAL-45 27 chr2L 1590955 1590991 chr2L 1591031 1591064 5 75 1.0 2.0 1.5 2.0 109 chr2L 1590955 intron haf + chr2L 1591010 intron haf + chr2L 1591064 intron haf + chr2L_5_1590001 chr2L_1590001 RAL-45 28 chr2L 1699093 1699119 chr2L 1699183 1699209 9 89 1.5 4.5 3.0 2.2 116 chr2L 1699093 3` UTR chinmo + chr2L 1699151 3` UTR chinmo + chr2L 1699209 3` UTR chinmo + chr2L_9_1695001 chr2L_1695001 RAL-45 29 chr2L 1711373 1711384 chr2L 1711697 1711708 mdg3 5 323 2.5 11.0 6.8 0.6 335 chr2L 1711373 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711540 3` UTR frtz - chr2L 1711708 3` UTR frtz - chr2L_5_1710001 chr2L_1710001 RAL-45 30 chr2L 1721823 1721856 chr2L 1721907 1721940 11 84 0.5 1.5 1.0 5.5 117 chr2L 1721823 intron Rim2 - chr2L 1721882 intron Rim2 - chr2L 1721940 intron Rim2 - chr2L_11_1720001 chr2L_1720001 RAL-45 31 chr2L 1722743 1722755 chr2L 20140901 20140903 4 18418155 0.5 8.5 4.5 0.7 18418160 chr2L 1722743 intron Rim2 - chr2L 10931823 intron dpr2 - chr2L 20140903 intergenic not near genes chr2L_4_10930001 chr2L_10930001 RAL-45 32 chr2L 1910538 1910569 chr2L 1910626 1910658 8 89 2.0 2.5 2.2 2.5 120 chr2L 1910538 intron CG7337 + chr2L 1910598 intron CG7337 + chr2L 1910658 intron CG7337 + chr2L_8_1910001 chr2L_1910001 RAL-45 33 chr2L 1946728 1946757 chr2L 1946804 1946832 8 76 0.5 0.5 0.5 5.3 104 chr2L 1946728 5` UTR CG33673 - chr2L 1946780 intergenic CG33673 - chr2L 1946832 intergenic CG33673 - chr2L_8_1945001 chr2L_1945001 RAL-45 34 chr2L 2073006 2073013 chr2L 2073084 2073092 6 78 4.5 0.0 2.2 1.9 86 chr2L 2073006 intron dpr3 - chr2L 2073049 intron dpr3 - chr2L 2073092 intron dpr3 - chr2L_6_2070001 chr2L_2070001 RAL-45 35 chr2L 2083984 2084000 chr2L 2084280 2084296 6 296 2.5 1.5 2.0 2.0 312 chr2L 2083984 intron,5` UTR dpr3 -,CR44055 + chr2L 2084140 intron,5` UTR dpr3 -,CR44055 + chr2L 2084296 intron,5` UTR dpr3 -,CR44055 + chr2L_6_2080001 chr2L_2080001 RAL-45 36 chr2L 2100378 2100399 chr2L 2109529 2109548 roo 11 9151 3.5 5.0 4.2 2.1 9170 chr2L 2100378 intron dpr3 - chr2L 2104963 intron dpr3 - chr2L 2109548 intron dpr3 - chr2L_11_2100001 chr2L_2100001 RAL-45 37 chr2L 2112135 2112144 chr2L 2119776 2119806 opus 6 7658 2.0 4.0 3.0 1.5 7671 chr2L 2112135 intergenic not near genes chr2L 2115970 intergenic not near genes chr2L 2119806 intergenic not near genes chr2L_6_2115001 chr2L_2115001 RAL-45 38 chr2L 2294054 2294073 chr2L 2299251 2299278 copia 6 5203 2.0 2.0 2.0 2.0 5224 chr2L 2294054 intergenic not near genes chr2L 2296666 intergenic not near genes chr2L 2299278 intergenic not near genes chr2L_6_2295001 chr2L_2295001 RAL-45 39 chr2L 2318877 2318906 chr2L 2318954 2318962 17 70 4.0 4.5 4.2 3.3 85 chr2L 2318877 intron,intron CG9967 -,eys + chr2L 2318920 intron,intron CG9967 -,eys + chr2L 2318962 intron,intron CG9967 -,eys + chr2L_17_2315001 chr2L_2315001 RAL-45 40 chr2L 2427377 2427397 chr2L 2427463 2427482 7 86 6.5 1.5 4.0 1.4 105 chr2L 2427377 3` UTR CR44912 - chr2L 2427430 3` UTR CR44912 - chr2L 2427482 3` UTR CR44912 - chr2L_7_2425001 chr2L_2425001 RAL-45 41 chr2L 2439272 2439281 chr2L 2439349 2439358 4 74 9.0 6.5 7.8 0.5 86 chr2L 2439272 intron dpp + chr2L 2439315 intron dpp + chr2L 2439358 intron dpp + chr2L_4_2435001 chr2L_2435001 RAL-45 42 chr2L 2633125 2633147 chr2L 2633205 2633227 4 80 4.0 0.5 2.2 1.2 102 chr2L 2633125 intergenic not near genes chr2L 2633176 intergenic not near genes chr2L 2633227 intergenic not near genes chr2L_4_2630001 chr2L_2630001 RAL-45 43 chr2L 2661212 2661233 chr2L 2663050 2663060 I-element 5 1836 0.5 2.5 1.5 2.0 1848 chr2L 2661212 intergenic not near genes chr2L 2662136 intergenic not near genes chr2L 2663060 intergenic not near genes chr2L_5_2660001 chr2L_2660001 RAL-45 44 chr2L 2667623 2667645 chr2L 2667702 2667724 8 79 5.5 3.0 4.2 1.5 101 chr2L 2667623 intergenic not near genes chr2L 2667674 intergenic not near genes chr2L 2667724 intergenic not near genes chr2L_8_2665001 chr2L_2665001 RAL-45 45 chr2L 3073035 3073063 chr2L 3078238 3078266 copia 9 5203 2.5 3.5 3.0 2.2 5231 chr2L 3073035 intron toc - chr2L 3075650 intron toc - chr2L 3078266 intron toc - chr2L_9_3075001 chr2L_3075001 RAL-45 46 chr2L 3367015 3367043 chr2L 3367164 3367193 6 150 3.0 3.5 3.2 1.4 178 chr2L 3367015 intron CG34394 - chr2L 3367104 intron CG34394 - chr2L 3367193 intron CG34394 - chr2L_6_3365001 chr2L_3365001 RAL-45 47 chr2L 3508352 3508375 chr2L 3508429 3508452 5 77 0.0 1.5 0.8 2.8 100 chr2L 3508352 intergenic tim -,CR45299 + chr2L 3508402 intergenic CR45299 +,tim - chr2L 3508452 intergenic CR45299 +,tim - chr2L_5_3505001 chr2L_3505001 RAL-45 48 chr2L 3523039 3523055 chr2L 3523152 3523168 5 113 3.0 5.5 4.2 1.0 129 chr2L 3523039 exon Sr-CIV - chr2L 3523104 intron Sr-CIV - chr2L 3523168 exon Sr-CIV - chr2L_5_3520001 chr2L_3520001 RAL-45 49 chr2L 3582883 3582912 chr2L 3582960 3582989 8 76 0.0 2.5 1.2 3.6 106 chr2L 3582883 intergenic not near genes chr2L 3582936 intergenic not near genes chr2L 3582989 intergenic not near genes chr2L_8_3580001 chr2L_3580001 RAL-45 50 chr2L 3610425 3610452 chr2L 3610575 3610594 5 147 3.5 5.0 4.2 1.0 169 chr2L 3610425 intergenic not near genes chr2L 3610510 intergenic not near genes chr2L 3610594 intergenic not near genes chr2L_5_3610001 chr2L_3610001 RAL-45 51 chr2L 3634125 3634139 chr2L 3634184 3634219 4 76 1.5 3.0 2.2 1.2 94 chr2L 3634125 intron for - chr2L 3634172 intron for - chr2L 3634219 intron for - chr2L_4_3630001 chr2L_3630001 RAL-45 52 chr2L 3649803 3649821 chr2L 3655006 3655024 copia 5 5202 1.0 3.5 2.2 1.6 5221 chr2L 3649803 intron for - chr2L 3652414 intron for - chr2L 3655024 intron for - chr2L_5_3650001 chr2L_3650001 RAL-45 53 chr2L 3783251 3783276 chr2L 3783342 3783367 6 91 1.5 1.0 1.2 2.7 116 chr2L 3783251 exon bowl + chr2L 3783309 3` UTR bowl + chr2L 3783367 3` UTR bowl + chr2L_6_3780001 chr2L_3780001 RAL-45 54 chr2L 3785604 3785607 chr2L 3786377 3786380 5 773 6.0 10.0 8.0 0.6 776 chr2L 3785604 3` UTR CG31960 + chr2L 3785992 exon CG31958 + chr2L 3786380 intergenic CG31958 + chr2L_5_3785001 chr2L_3785001 RAL-45 55 chr2L 3819039 3819061 chr2L 3819121 3819143 4 82 2.5 0.0 1.2 1.8 104 chr2L 3819039 intergenic not near genes chr2L 3819091 intergenic not near genes chr2L 3819143 intergenic not near genes chr2L_4_3815001 chr2L_3815001 RAL-45 56 chr2L 3891896 3891915 chr2L 3891981 3892000 8 85 3.0 3.5 3.2 1.9 104 chr2L 3891896 intron capu - chr2L 3891948 intron capu - chr2L 3892000 intron capu - chr2L_8_3890001 chr2L_3890001 RAL-45 57 chr2L 3915477 3915488 chr2L 3915559 3915568 5 82 0.0 3.0 1.5 2.0 91 chr2L 3915477 intron fred - chr2L 3915522 intron fred - chr2L 3915568 intron fred - chr2L_5_3915001 chr2L_3915001 RAL-45 58 chr2L 4066042 4066057 chr2L 4068866 4068882 Juan 7 2823 3.5 1.0 2.2 2.2 2840 chr2L 4066042 intron ed + chr2L 4067462 intron ed + chr2L 4068882 intron ed + chr2L_7_4065001 chr2L_4065001 RAL-45 59 chr2L 4082887 4082917 chr2L 4082991 4083010 8 102 5.0 2.5 3.8 1.7 123 chr2L 4082887 intron ed + chr2L 4082948 intron ed + chr2L 4083010 intron ed + chr2L_8_4080001 chr2L_4080001 RAL-45 60 chr2L 4144774 4144799 chr2L 4145519 4145543 6 744 2.0 5.0 3.5 1.3 769 chr2L 4144774 intergenic not near genes chr2L 4145158 intergenic not near genes chr2L 4145543 intergenic not near genes chr2L_6_4145001 chr2L_4145001 RAL-45 61 chr2L 4150640 4150655 chr2L 4150707 4150715 7 71 0.0 2.0 1.0 3.5 75 chr2L 4150640 exon CG2955 + chr2L 4150678 exon CG2955 + chr2L 4150715 exon CG2955 + chr2L_7_4150001 chr2L_4150001 RAL-45 62 chr2L 4160504 4160529 chr2L 4160915 4160932 12 410 2.0 4.5 3.2 2.9 428 chr2L 4160504 intergenic not near genes chr2L 4160718 intergenic not near genes chr2L 4160932 intergenic not near genes chr2L_12_4160001 chr2L_4160001 RAL-45 63 chr2L 4188852 4188883 chr2L 4189710 4189744 8 860 19.0 9.0 14.0 0.5 892 chr2L 4188852 exon lectin-24Db + chr2L 4189298 intergenic lectin-24Db +,CG3714 - chr2L 4189744 3` UTR CG3714 - chr2L_8_4185001 chr2L_4185001 RAL-45 64 chr2L 4224443 4224475 chr2L 4224519 4224551 5 76 0.5 0.0 0.2 4.2 108 chr2L 4224443 intergenic CG3702 - chr2L 4224497 intergenic CG3702 - chr2L 4224551 intergenic CG3702 - chr2L_5_4220001 chr2L_4220001 RAL-45 65 chr2L 4317894 4317910 chr2L 4317967 4317988 6 77 1.5 3.5 2.5 1.7 94 chr2L 4317894 intron tutl + chr2L 4317941 intron tutl + chr2L 4317988 intron tutl + chr2L_6_4315001 chr2L_4315001 RAL-45 66 chr2L 4351474 4351502 chr2L 4351550 4351578 13 75 5.0 3.5 4.2 2.5 104 chr2L 4351474 intergenic CR44700 + chr2L 4351526 intergenic CR44700 + chr2L 4351578 intergenic CR44700 + chr2L_13_4350001 chr2L_4350001 RAL-45 67 chr2L 4362216 4362223 chr2L 4362333 4362341 4 117 5.0 3.0 4.0 0.8 125 chr2L 4362216 5` UTR Traf4 + chr2L 4362278 5` UTR Traf4 + chr2L 4362341 5` UTR Traf4 + chr2L_4_4360001 chr2L_4360001 RAL-45 68 chr2L 4586967 4586995 chr2L 4587059 4587086 9 92 1.5 2.5 2.0 3.0 119 chr2L 4586967 intron dp - chr2L 4587026 intron dp - chr2L 4587086 intron dp - chr2L_9_4585001 chr2L_4585001 RAL-45 69 chr2L 4601703 4601727 chr2L 4609143 4609168 mdg1 10 7441 6.0 1.0 3.5 2.2 7465 chr2L 4601703 intron dp - chr2L 4605436 intron dp - chr2L 4609168 intron dp - chr2L_10_4605001 chr2L_4605001 RAL-45 70 chr2L 4720627 4720649 chr2L 4720710 4720732 4 83 3.0 1.5 2.2 1.2 105 chr2L 4720627 3` UTR CG34351 + chr2L 4720680 3` UTR CG34351 + chr2L 4720732 3` UTR CG34351 + chr2L_4_4720001 chr2L_4720001 RAL-45 71 chr2L 4774176 4774210 chr2L 4774742 4774774 5 565 0.0 0.5 0.2 4.2 598 chr2L 4774176 intron CG15630 - chr2L 4774475 intron CG15630 - chr2L 4774774 intron CG15630 - chr2L_5_4770001 chr2L_4770001 RAL-45 72 chr2L 4858467 4858479 chr2L 4858555 4858567 5 87 2.0 0.0 1.0 2.5 100 chr2L 4858467 intron pog + chr2L 4858517 intron pog + chr2L 4858567 intron pog + chr2L_5_4855001 chr2L_4855001 RAL-45 73 chr2L 4869466 4869496 chr2L 4869546 4869576 6 80 1.0 2.0 1.5 2.4 110 chr2L 4869466 intron pog + chr2L 4869521 intron pog + chr2L 4869576 intron pog + chr2L_6_4865001 chr2L_4865001 RAL-45 74 chr2L 4953512 4953544 chr2L 4953753 4953777 pogo 5 239 2.0 0.0 1.0 2.5 265 chr2L 4953512 intergenic Jon25Bii - chr2L 4953644 intergenic not near genes chr2L 4953777 intergenic not near genes chr2L_5_4950001 chr2L_4950001 RAL-45 75 chr2L 5083224 5083257 chr2L 5083304 5083337 14 81 34.5 34.5 34.5 0.4 113 chr2L 5083224 intron pgant5 - chr2L 5083280 intron pgant5 - chr2L 5083337 intron pgant5 - chr2L_14_5080001 chr2L_5080001 RAL-45 76 chr2L 5092411 5092434 chr2L 5092498 5092521 4 87 2.0 1.0 1.5 1.6 110 chr2L 5092411 intron pgant5 - chr2L 5092466 intron pgant5 - chr2L 5092521 intron pgant5 - chr2L_4_5090001 chr2L_5090001 RAL-45 77 chr2L 5342769 5342790 chr2L 5345149 5345170 Doc 4 2380 2.0 1.0 1.5 1.6 2401 chr2L 5342769 intergenic not near genes chr2L 5343970 intergenic not near genes chr2L 5345170 intergenic not near genes chr2L_4_5340001 chr2L_5340001 RAL-45 78 chr2L 5651406 5651435 chr2L 5651530 5651559 4 124 1.5 1.5 1.5 1.6 153 chr2L 5651406 intron CG31646 - chr2L 5651482 intron CG31646 - chr2L 5651559 intron CG31646 - chr2L_4_5650001 chr2L_5650001 RAL-45 79 chr2L 5682283 5682317 chr2L 5682367 5682401 7 83 1.5 1.5 1.5 2.8 118 chr2L 5682283 intergenic not near genes chr2L 5682342 intergenic not near genes chr2L 5682401 intergenic not near genes chr2L_7_5680001 chr2L_5680001 RAL-45 80 chr2L 5695866 5695886 chr2L 5695958 5695978 6 92 0.0 2.5 1.2 2.7 112 chr2L 5695866 intergenic not near genes chr2L 5695922 intergenic not near genes chr2L 5695978 intergenic not near genes chr2L_6_5695001 chr2L_5695001 RAL-45 81 chr2L 5749894 5749930 chr2L 5749973 5749981 11 68 5.5 4.0 4.8 1.9 87 chr2L 5749894 intron CG11030 + chr2L 5749938 intron CG11030 + chr2L 5749981 intron CG11030 + chr2L_11_5745001 chr2L_5745001 RAL-45 82 chr2L 5827715 5827740 chr2L 5836723 5836748 roo 7 9008 2.5 5.0 3.8 1.5 9033 chr2L 5827715 intron TrissinR + chr2L 5832232 intron TrissinR + chr2L 5836748 intron TrissinR + chr2L_7_5830001 chr2L_5830001 RAL-45 83 chr2L 6363149 6363178 chr2L 6366071 6366072 Burdock 10 2918 0.5 3.0 1.8 3.6 2923 chr2L 6363149 intergenic not near genes chr2L 6364610 intergenic not near genes chr2L 6366072 intergenic not near genes chr2L_10_6360001 chr2L_6360001 RAL-45 84 chr2L 6426862 6426883 chr2L 6445122 6445142 roo 6 18260 2.0 1.0 1.5 2.4 18280 chr2L 6426862 3` UTR CG9527 - chr2L 6436002 intron CG9527 - chr2L 6445142 exon CG9527 - chr2L_6_6435001 chr2L_6435001 RAL-45 85 chr2L 6544372 6544395 chr2L 6544464 6544487 7 91 2.5 4.5 3.5 1.6 115 chr2L 6544372 intron eya - chr2L 6544430 intron eya - chr2L 6544487 intron eya - chr2L_7_6540001 chr2L_6540001 RAL-45 86 chr2L 6590103 6590124 chr2L 6590171 6590202 11 75 1.0 5.0 3.0 2.8 99 chr2L 6590103 intron CG11319 - chr2L 6590152 intron CG11319 - chr2L 6590202 intron CG11319 - chr2L_11_6590001 chr2L_6590001 RAL-45 87 chr2L 6626888 6626913 chr2L 6626972 6626998 8 85 4.0 2.0 3.0 2.0 110 chr2L 6626888 intron Oatp26F - chr2L 6626943 intron Oatp26F - chr2L 6626998 intron Oatp26F - chr2L_8_6625001 chr2L_6625001 RAL-45 88 chr2L 6724534 6724556 chr2L 6724617 6724639 5 83 0.5 1.5 1.0 2.5 105 chr2L 6724534 intron Liprin-alpha + chr2L 6724586 intron Liprin-alpha + chr2L 6724639 intron Liprin-alpha + chr2L_5_6720001 chr2L_6720001 RAL-45 89 chr2L 6746100 6746115 chr2L 6746173 6746191 4 75 2.5 1.5 2.0 1.3 91 chr2L 6746100 intron CG11221 + chr2L 6746146 intron CG11221 + chr2L 6746191 intron CG11221 + chr2L_4_6745001 chr2L_6745001 RAL-45 90 chr2L 6771990 6772020 chr2L 6772076 6772096 7 81 2.0 4.0 3.0 1.8 106 chr2L 6771990 intron CG11321 - chr2L 6772043 intron CG11321 - chr2L 6772096 intron CG11321 - chr2L_7_6770001 chr2L_6770001 RAL-45 91 chr2L 6969285 6969308 chr2L 6969356 6969387 7 78 3.0 4.0 3.5 1.6 102 chr2L 6969285 3` UTR snRNP-U1-70K - chr2L 6969336 3` UTR snRNP-U1-70K - chr2L 6969387 3` UTR snRNP-U1-70K - chr2L_7_6965001 chr2L_6965001 RAL-45 92 chr2L 7019569 7019595 chr2L 7019645 7019671 7 76 1.5 0.5 1.0 3.5 102 chr2L 7019569 intron ade3 - chr2L 7019620 intron ade3 - chr2L 7019671 intron ade3 - chr2L_7_7015001 chr2L_7015001 RAL-45 93 chr2L 7051155 7051166 chr2L 7051230 7051242 6 76 0.0 0.5 0.2 5.0 87 chr2L 7051155 intron milt + chr2L 7051198 intron milt + chr2L 7051242 intron milt + chr2L_6_7050001 chr2L_7050001 RAL-45 94 chr2L 7140843 7140868 chr2L 7140925 7140950 7 82 1.5 3.5 2.5 2.0 107 chr2L 7140843 intron Pvf3 - chr2L 7140896 intron Pvf3 - chr2L 7140950 intron Pvf3 - chr2L_7_7140001 chr2L_7140001 RAL-45 95 chr2L 7249620 7249649 chr2L 7249703 7249732 10 83 3.0 5.0 4.0 2.0 112 chr2L 7249620 intergenic Ndae1 - chr2L 7249676 intergenic Ndae1 - chr2L 7249732 intergenic Ndae1 - chr2L_10_7245001 chr2L_7245001 RAL-45 96 chr2L 7325915 7325924 chr2L 7326000 7326004 4 83 4.0 2.0 3.0 1.0 89 chr2L 7325915 intergenic not near genes chr2L 7325960 intergenic not near genes chr2L 7326004 intergenic not near genes chr2L_4_7325001 chr2L_7325001 RAL-45 97 chr2L 7343326 7343351 chr2L 7350442 7350467 roo 11 7116 7.0 6.5 6.8 1.4 7141 chr2L 7343326 intron Wnt6 + chr2L 7346896 intron Wnt6 + chr2L 7350467 intron Wnt6 + chr2L_11_7345001 chr2L_7345001 RAL-45 98 chr2L 7468203 7468231 chr2L 7468290 7468318 6 87 0.5 1.0 0.8 3.3 115 chr2L 7468203 intron CG6055 + chr2L 7468260 intron CG6055 + chr2L 7468318 intron CG6055 + chr2L_6_7465001 chr2L_7465001 RAL-45 99 chr2L 7502747 7502770 chr2L 7502813 7502846 8 72 0.5 2.5 1.5 3.2 99 chr2L 7502747 intron RapGAP1 - chr2L 7502796 intron RapGAP1 - chr2L 7502846 intron RapGAP1 - chr2L_8_7500001 chr2L_7500001 RAL-45 100 chr2L 7629156 7629188 chr2L 7629243 7629275 6 87 0.5 3.5 2.0 2.0 119 chr2L 7629156 intergenic not near genes chr2L 7629216 intergenic not near genes chr2L 7629275 intergenic not near genes chr2L_6_7625001 chr2L_7625001 RAL-45 101 chr2L 7867570 7867602 chr2L 7867664 7867696 5 94 1.0 0.5 0.8 2.8 126 chr2L 7867570 intron Proc - chr2L 7867633 intron Proc - chr2L 7867696 intron Proc - chr2L_5_7865001 chr2L_7865001 RAL-45 102 chr2L 7959048 7959054 chr2L 7960454 7960465 pogo 5 1410 4.5 0.0 2.2 1.6 1417 chr2L 7959048 intron Snoo - chr2L 7959756 intron Snoo - chr2L 7960465 intron Snoo - chr2L_5_7955001 chr2L_7955001 RAL-45 103 chr2L 7977093 7977112 chr2L 7984069 7984088 297 4 6976 1.5 3.5 2.5 1.1 6995 chr2L 7977093 intron Snoo - chr2L 7980590 intron Snoo - chr2L 7984088 intron,5` UTR Snoo -,CG7231 + chr2L_4_7980001 chr2L_7980001 RAL-45 104 chr2L 8044101 8044131 chr2L 8044180 8044210 4 79 2.0 4.5 3.2 1.0 109 chr2L 8044101 intron CG7466 + chr2L 8044156 intron CG7466 + chr2L 8044210 intron CG7466 + chr2L_4_8040001 chr2L_8040001 RAL-45 105 chr2L 8167148 8167178 chr2L 8167239 8167269 5 91 0.0 4.5 2.2 1.6 121 chr2L 8167148 intron Piezo + chr2L 8167208 intron Piezo + chr2L 8167269 intron Piezo + chr2L_5_8165001 chr2L_8165001 RAL-45 106 chr2L 8258165 8258200 chr2L 8258262 8258297 7 97 3.0 1.0 2.0 2.3 132 chr2L 8258165 intergenic Btk29A -,mir-2b-1 - chr2L 8258231 intergenic Btk29A -,mir-2b-1 - chr2L 8258297 intergenic Btk29A -,mir-2b-1 - chr2L_7_8255001 chr2L_8255001 RAL-45 107 chr2L 8604966 8604996 chr2L 8605064 8605093 4 96 2.0 1.0 1.5 1.6 127 chr2L 8604966 intron Sema-1a + chr2L 8605030 intron Sema-1a + chr2L 8605093 intron Sema-1a + chr2L_4_8605001 chr2L_8605001 RAL-45 108 chr2L 8689700 8689733 chr2L 8689797 8689830 10 97 5.0 4.5 4.8 1.7 130 chr2L 8689700 intron Hnf4 - chr2L 8689765 intron Hnf4 - chr2L 8689830 exon Hnf4 - chr2L_10_8685001 chr2L_8685001 RAL-45 109 chr2L 8723117 8723143 chr2L 8731494 8731519 Tirant 6 8376 2.0 2.0 2.0 2.0 8402 chr2L 8723117 intron raw - chr2L 8727318 intron raw - chr2L 8731519 intron raw - chr2L_6_8725001 chr2L_8725001 RAL-45 110 chr2L 8857983 8857999 chr2L 8858060 8858062 6 75 9.5 2.0 5.8 0.9 79 chr2L 8857983 intergenic not near genes chr2L 8858022 intergenic not near genes chr2L 8858062 intergenic not near genes chr2L_6_8855001 chr2L_8855001 RAL-45 111 chr2L 9000277 9000308 chr2L 9007787 9007817 roo 8 7510 5.5 2.5 4.0 1.6 7540 chr2L 9000277 intergenic Try29F + chr2L 9004047 intergenic not near genes chr2L 9007817 intergenic not near genes chr2L_8_9000001 chr2L_9000001 RAL-45 112 chr2L 9023153 9023184 chr2L 9023250 9023281 6 96 4.0 3.5 3.8 1.2 128 chr2L 9023153 intergenic not near genes chr2L 9023217 intergenic not near genes chr2L 9023281 intergenic not near genes chr2L_6_9020001 chr2L_9020001 RAL-45 113 chr2L 9040031 9040054 chr2L 9040118 9040141 4 86 3.5 1.0 2.2 1.2 110 chr2L 9040031 intergenic not near genes chr2L 9040086 intergenic not near genes chr2L 9040141 intergenic not near genes chr2L_4_9040001 chr2L_9040001 RAL-45 114 chr2L 9084336 9084340 chr2L 16217660 16217660 17 7133321 15.0 18.5 16.8 1.0 7133324 chr2L 9084336 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_17_12650001 chr2L_12650001 RAL-45 115 chr2L 9156686 9156713 chr2L 9156762 9156791 7 73 3.0 4.0 3.5 1.6 105 chr2L 9156686 intron CG32982 + chr2L 9156738 intron CG32982 + chr2L 9156791 intron CG32982 + chr2L_7_9155001 chr2L_9155001 RAL-45 116 chr2L 9202055 9202088 chr2L 9202131 9202164 14 74 2.5 3.0 2.8 3.7 109 chr2L 9202055 intron tai + chr2L 9202110 intron tai + chr2L 9202164 intron tai + chr2L_14_9200001 chr2L_9200001 RAL-45 117 chr2L 9258554 9258570 chr2L 9258633 9258649 5 79 1.5 5.5 3.5 1.1 95 chr2L 9258554 intron Ggamma30A + chr2L 9258602 intron Ggamma30A + chr2L 9258649 intron Ggamma30A + chr2L_5_9255001 chr2L_9255001 RAL-45 118 chr2L 9259219 9259238 chr2L 9259312 9259331 4 93 1.0 2.5 1.8 1.4 112 chr2L 9259219 intron Ggamma30A + chr2L 9259275 intron Ggamma30A + chr2L 9259331 intron Ggamma30A + chr2L_4_9255001 chr2L_9255001 RAL-45 119 chr2L 9297382 9297394 chr2L 9297457 9297471 7 76 3.5 4.5 4.0 1.4 89 chr2L 9297382 3` UTR Ggamma30A + chr2L 9297426 3` UTR Ggamma30A + chr2L 9297471 3` UTR Ggamma30A + chr2L_7_9295001 chr2L_9295001 RAL-45 120 chr2L 9302214 9302237 chr2L 9302310 9302334 7 96 0.5 3.0 1.8 2.5 120 chr2L 9302214 3` UTR Ggamma30A + chr2L 9302274 3` UTR Ggamma30A + chr2L 9302334 3` UTR Ggamma30A + chr2L_7_9300001 chr2L_9300001 RAL-45 121 chr2L 9317544 9317560 chr2L 9317820 9317837 5 277 0.0 6.5 3.2 1.2 293 chr2L 9317544 intergenic not near genes chr2L 9317690 intergenic not near genes chr2L 9317837 intergenic not near genes chr2L_5_9315001 chr2L_9315001 RAL-45 122 chr2L 9490522 9490549 chr2L 9490602 9490629 13 79 3.5 3.5 3.5 2.9 107 chr2L 9490522 intergenic not near genes chr2L 9490576 intergenic not near genes chr2L 9490629 intergenic not near genes chr2L_13_9490001 chr2L_9490001 RAL-45 123 chr2L 9581754 9581784 chr2L 9581844 9581856 6 84 7.0 2.0 4.5 1.1 102 chr2L 9581754 intergenic gcm - chr2L 9581805 intergenic gcm - chr2L 9581856 intergenic gcm - chr2L_6_9580001 chr2L_9580001 RAL-45 124 chr2L 9630999 9631020 chr2L 9631087 9631108 6 88 3.5 1.5 2.5 1.7 109 chr2L 9630999 intergenic not near genes chr2L 9631054 intergenic not near genes chr2L 9631108 intergenic not near genes chr2L_6_9630001 chr2L_9630001 RAL-45 125 chr2L 9873129 9873159 chr2L 9873405 9873435 10 276 3.5 3.0 3.2 2.4 306 chr2L 9873129 intron nAChRalpha6 - chr2L 9873282 intron nAChRalpha6 - chr2L 9873435 intron nAChRalpha6 - chr2L_10_9870001 chr2L_9870001 RAL-45 126 chr2L 9973726 9973759 chr2L 9980845 9980878 HMS-Beagle 14 7119 4.5 9.0 6.8 1.8 7152 chr2L 9973726 intergenic not near genes chr2L 9977302 intergenic not near genes chr2L 9980878 intergenic not near genes chr2L_14_9975001 chr2L_9975001 RAL-45 127 chr2L 10042649 10042678 chr2L 10042829 10042859 5 181 1.5 1.5 1.5 2.0 210 chr2L 10042649 intergenic not near genes chr2L 10042754 intergenic not near genes chr2L 10042859 intergenic not near genes chr2L_5_10040001 chr2L_10040001 RAL-45 128 chr2L 10156327 10156341 chr2L 10163797 10163811 blood 4 7470 6.5 3.0 4.8 0.7 7484 chr2L 10156327 intron,3` UTR CG44153 -,CG4839 + chr2L 10160069 intron CG44153 - chr2L 10163811 intron CG44153 - chr2L_4_10160001 chr2L_10160001 RAL-45 129 chr2L 10156344 10156355 chr2L 10163795 10163825 blood 5 7466 4.0 2.5 3.2 1.2 7481 chr2L 10156344 intron,3` UTR CG44153 -,CG4839 + chr2L 10160084 intron CG44153 - chr2L 10163825 intron CG44153 - chr2L_5_10160001 chr2L_10160001 RAL-45 130 chr2L 10518952 10518968 chr2L 10519030 10519046 4 78 2.0 0.5 1.2 1.8 94 chr2L 10518952 3` UTR Lrr47 + chr2L 10518999 3` UTR Lrr47 + chr2L 10519046 3` UTR Lrr47 + chr2L_4_10515001 chr2L_10515001 RAL-45 131 chr2L 10579054 10579081 chr2L 10579144 10579168 10 89 1.0 2.0 1.5 4.0 114 chr2L 10579054 intron Trim9 + chr2L 10579111 intron Trim9 + chr2L 10579168 intron Trim9 + chr2L_10_10575001 chr2L_10575001 RAL-45 132 chr2L 10580790 10580813 chr2L 10580871 10580891 7 81 5.0 4.5 4.8 1.2 101 chr2L 10580790 intron Trim9 + chr2L 10580840 intron Trim9 + chr2L 10580891 intron Trim9 + chr2L_7_10580001 chr2L_10580001 RAL-45 133 chr2L 10647599 10647609 chr2L 10647724 10647733 4 124 8.0 19.5 13.8 0.3 134 chr2L 10647599 exon CG17097 + chr2L 10647666 exon CG17097 + chr2L 10647733 exon CG17097 + chr2L_4_10645001 chr2L_10645001 RAL-45 134 chr2L 10701708 10701738 chr2L 10701788 10701818 9 78 1.0 0.5 0.8 5.0 110 chr2L 10701708 intergenic Lip1 -,Lip2 - chr2L 10701763 intergenic Lip2 -,Lip1 - chr2L 10701818 intergenic Lip2 -,Lip1 - chr2L_9_10700001 chr2L_10700001 RAL-45 135 chr2L 10740325 10740355 chr2L 10740418 10740450 8 95 1.5 1.0 1.2 3.6 125 chr2L 10740325 3` UTR CG12299 + chr2L 10740388 3` UTR CG12299 + chr2L 10740450 3` UTR CG12299 + chr2L_8_10740001 chr2L_10740001 RAL-45 136 chr2L 10777220 10777251 chr2L 10777332 10777363 5 112 1.0 1.0 1.0 2.5 143 chr2L 10777220 intron CG31869 - chr2L 10777292 intron CG31869 - chr2L 10777363 intron CG31869 - chr2L_5_10775001 chr2L_10775001 RAL-45 137 chr2L 10862857 10862875 chr2L 10864454 10864489 Rt1c 11 1610 5.0 4.0 4.5 2.0 1632 chr2L 10862857 3` UTR CR43807 - chr2L 10863673 intron CR43807 - chr2L 10864489 3` UTR CR43807 - chr2L_11_10860001 chr2L_10860001 RAL-45 138 chr2L 10919796 10919825 chr2L 10919885 10919914 4 89 1.5 2.0 1.8 1.4 118 chr2L 10919796 intron dpr2 - chr2L 10919855 intron dpr2 - chr2L 10919914 intron dpr2 - chr2L_4_10915001 chr2L_10915001 RAL-45 139 chr2L 10936512 10936519 chr2L 10936646 10936653 5 134 3.0 1.0 2.0 1.7 141 chr2L 10936512 intron dpr2 - chr2L 10936582 intron dpr2 - chr2L 10936653 intron dpr2 - chr2L_5_10935001 chr2L_10935001 RAL-45 140 chr2L 10945088 10945101 chr2L 10945165 10945176 6 76 3.0 5.5 4.2 1.2 88 chr2L 10945088 intron dpr2 - chr2L 10945132 intron dpr2 - chr2L 10945176 intron dpr2 - chr2L_6_10945001 chr2L_10945001 RAL-45 141 chr2L 10946949 10946975 chr2L 10956163 10956190 roo 9 9215 2.0 5.0 3.5 2.0 9241 chr2L 10946949 intron dpr2 - chr2L 10951570 intron dpr2 - chr2L 10956190 intron dpr2 - chr2L_9_10950001 chr2L_10950001 RAL-45 142 chr2L 11339738 11339741 chr2L 11339815 11339818 4 77 7.0 3.0 5.0 0.7 80 chr2L 11339738 intergenic not near genes chr2L 11339778 intergenic not near genes chr2L 11339818 intergenic not near genes chr2L_4_11335001 chr2L_11335001 RAL-45 143 chr2L 11380616 11380639 chr2L 11380693 11380716 5 77 1.0 1.0 1.0 2.5 100 chr2L 11380616 intergenic not near genes chr2L 11380666 intergenic not near genes chr2L 11380716 intergenic not near genes chr2L_5_11380001 chr2L_11380001 RAL-45 144 chr2L 11409642 11409672 chr2L 11410151 11410183 7 511 2.0 6.0 4.0 1.4 541 chr2L 11409642 intergenic not near genes chr2L 11409912 intergenic not near genes chr2L 11410183 intergenic not near genes chr2L_7_11405001 chr2L_11405001 RAL-45 145 chr2L 11455565 11455595 chr2L 11455649 11455680 15 84 3.0 3.0 3.0 3.8 115 chr2L 11455565 intergenic not near genes chr2L 11455622 intergenic not near genes chr2L 11455680 intergenic not near genes chr2L_15_11455001 chr2L_11455001 RAL-45 146 chr2L 11537983 11538006 chr2L 11538070 11538099 10 91 0.5 1.0 0.8 5.6 116 chr2L 11537983 intergenic not near genes chr2L 11538041 intergenic not near genes chr2L 11538099 intergenic not near genes chr2L_10_11535001 chr2L_11535001 RAL-45 147 chr2L 11563644 11563669 chr2L 11568846 11568873 copia 7 5203 3.0 2.5 2.8 1.8 5229 chr2L 11563644 intergenic not near genes chr2L 11566258 intergenic not near genes chr2L 11568873 intergenic not near genes chr2L_7_11565001 chr2L_11565001 RAL-45 148 chr2L 11612671 11612696 chr2L 11612759 11612784 5 88 1.0 5.0 3.0 1.2 113 chr2L 11612671 intron kek2 + chr2L 11612728 intron kek2 + chr2L 11612784 intron kek2 + chr2L_5_11610001 chr2L_11610001 RAL-45 149 chr2L 11614052 11614084 chr2L 11615547 11615579 hopper2 8 1495 3.0 1.0 2.0 2.7 1527 chr2L 11614052 intron kek2 + chr2L 11614816 intron kek2 + chr2L 11615579 intron kek2 + chr2L_8_11610001 chr2L_11610001 RAL-45 150 chr2L 11713507 11713535 chr2L 11720975 11721003 blood 14 7468 3.5 3.0 3.2 3.3 7496 chr2L 11713507 intergenic not near genes chr2L 11717255 intergenic not near genes chr2L 11721003 intergenic CR44143 + chr2L_14_11715001 chr2L_11715001 RAL-45 151 chr2L 11820432 11820461 chr2L 11820513 11820542 7 81 1.5 1.5 1.5 2.8 110 chr2L 11820432 intron Pde1c - chr2L 11820487 intron Pde1c - chr2L 11820542 intron Pde1c - chr2L_7_11820001 chr2L_11820001 RAL-45 152 chr2L 11889423 11889451 chr2L 11889763 11889794 9 342 1.5 2.5 2.0 3.0 371 chr2L 11889423 intron Pde1c - chr2L 11889608 intron Pde1c - chr2L 11889794 intron Pde1c - chr2L_9_11885001 chr2L_11885001 RAL-45 153 chr2L 12153941 12153961 chr2L 12154018 12154038 6 77 2.5 3.0 2.8 1.6 97 chr2L 12153941 exon CG31760 + chr2L 12153990 intron CG31760 + chr2L 12154038 intron CG31760 + chr2L_6_12150001 chr2L_12150001 RAL-45 154 chr2L 12156119 12156130 chr2L 12156207 12156219 4 89 0.5 1.0 0.8 2.2 100 chr2L 12156119 intron CG31760 + chr2L 12156169 intron CG31760 + chr2L 12156219 intron CG31760 + chr2L_4_12155001 chr2L_12155001 RAL-45 155 chr2L 12157612 12157641 chr2L 12157691 12157720 7 79 3.5 2.5 3.0 1.8 108 chr2L 12157612 intron CG31760 + chr2L 12157666 intron CG31760 + chr2L 12157720 intron CG31760 + chr2L_7_12155001 chr2L_12155001 RAL-45 156 chr2L 12205004 12205016 chr2L 12205117 12205129 4 113 0.0 1.5 0.8 2.2 125 chr2L 12205004 intron aret + chr2L 12205066 intron aret + chr2L 12205129 intron aret + chr2L_4_12205001 chr2L_12205001 RAL-45 157 chr2L 12487888 12487912 chr2L 12487969 12487993 7 81 7.0 2.0 4.5 1.3 105 chr2L 12487888 intron bun - chr2L 12487940 intron bun - chr2L 12487993 intron bun - chr2L_7_12485001 chr2L_12485001 RAL-45 158 chr2L 12529244 12529435 chr2L 12529377 12529511 6 95 0.5 0.5 0.5 4.0 267 chr2L 12529244 intron bun - chr2L 12529378 intron bun - chr2L 12529511 intron bun - chr2L_6_12525001 chr2L_12525001 RAL-45 159 chr2L 12584364 12584390 chr2L 12584448 12584474 7 84 2.0 0.0 1.0 3.5 110 chr2L 12584364 intergenic not near genes chr2L 12584419 intergenic not near genes chr2L 12584474 intergenic not near genes chr2L_7_12580001 chr2L_12580001 RAL-45 160 chr2L 12728930 12728945 chr2L 12729170 12729185 pogo 5 240 3.5 5.0 4.2 1.0 255 chr2L 12728930 intron MRP + chr2L 12729058 intron MRP + chr2L 12729185 exon MRP + chr2L_5_12725001 chr2L_12725001 RAL-45 161 chr2L 12731075 12731092 chr2L 12735842 12735859 F-element 4 4767 0.5 5.0 2.8 1.1 4784 chr2L 12731075 intron MRP + chr2L 12733467 intron MRP + chr2L 12735859 intron MRP + chr2L_4_12730001 chr2L_12730001 RAL-45 162 chr2L 12739172 12739204 chr2L 12743953 12743983 Doc 11 4780 3.5 3.0 3.2 2.6 4811 chr2L 12739172 exon MRP + chr2L 12741578 intron MRP + chr2L 12743983 exon MRP + chr2L_11_12740001 chr2L_12740001 RAL-45 163 chr2L 12751309 12751340 chr2L 12751392 12751423 12 83 2.0 4.5 3.2 2.9 114 chr2L 12751309 intergenic not near genes chr2L 12751366 intergenic not near genes chr2L 12751423 intergenic not near genes chr2L_12_12750001 chr2L_12750001 RAL-45 164 chr2L 12781809 12781815 chr2L 12789252 12789258 Quasimodo 5 7442 5.0 2.0 3.5 1.1 7449 chr2L 12781809 intergenic not near genes chr2L 12785534 intergenic not near genes chr2L 12789258 intergenic not near genes chr2L_5_12785001 chr2L_12785001 RAL-45 165 chr2L 12861695 12861717 chr2L 12863162 12863183 hobo 9 1466 3.5 4.0 3.8 1.9 1488 chr2L 12861695 intergenic not near genes chr2L 12862439 intergenic not near genes chr2L 12863183 intergenic not near genes chr2L_9_12860001 chr2L_12860001 RAL-45 166 chr2L 12905476 12905507 chr2L 12905560 12905591 5 84 0.5 0.5 0.5 3.3 115 chr2L 12905476 intergenic not near genes chr2L 12905534 intergenic not near genes chr2L 12905591 intergenic not near genes chr2L_5_12905001 chr2L_12905001 RAL-45 167 chr2L 12933850 12933880 chr2L 12941317 12941341 blood 12 7465 5.5 5.0 5.2 1.9 7491 chr2L 12933850 intergenic not near genes chr2L 12937596 intergenic not near genes chr2L 12941341 intergenic not near genes chr2L_12_12935001 chr2L_12935001 RAL-45 168 chr2L 13204322 13204335 chr2L 13204420 13204433 10 98 8.5 4.5 6.5 1.3 111 chr2L 13204322 intron Pect + chr2L 13204378 intron Pect + chr2L 13204433 intron Pect + chr2L_10_13200001 chr2L_13200001 RAL-45 169 chr2L 13215389 13215402 chr2L 13215664 13215677 4 275 1.0 2.0 1.5 1.6 288 chr2L 13215389 intergenic kek4 -,snRNA:U2:34ABb +,snRNA:U2:34ABc + chr2L 13215533 intergenic kek4 -,snRNA:U2:34ABb +,snRNA:U2:34ABc + chr2L 13215677 intergenic snRNA:U2:34ABb +,snRNA:U2:34ABc +,kek4 - chr2L_4_13215001 chr2L_13215001 RAL-45 170 chr2L 13351821 13351849 chr2L 13351906 13351935 7 86 1.5 2.5 2.0 2.3 114 chr2L 13351821 exon CG9395 - chr2L 13351878 intron CG9395 - chr2L 13351935 exon CG9395 - chr2L_7_13350001 chr2L_13350001 RAL-45 171 chr2L 13374325 13374355 chr2L 13374412 13374440 19 86 4.0 4.0 4.0 3.8 115 chr2L 13374325 5` UTR CG6565 + chr2L 13374382 5` UTR CG6565 + chr2L 13374440 5` UTR CG6565 + chr2L_19_13370001 chr2L_13370001 RAL-45 172 chr2L 13405648 13405671 chr2L 13410444 13410468 Doc 7 4797 7.5 0.5 4.0 1.4 4820 chr2L 13405648 exon CG7110 + chr2L 13408058 intron CG7110 + chr2L 13410468 intron CG7110 + chr2L_7_13405001 chr2L_13405001 RAL-45 173 chr2L 13481450 13481470 chr2L 13482057 13482077 jockey 9 607 4.0 3.5 3.8 1.9 627 chr2L 13481450 intron CG42784 + chr2L 13481764 intron CG42784 + chr2L 13482077 intron CG42784 + chr2L_9_13480001 chr2L_13480001 RAL-45 174 chr2L 13680240 13680265 chr2L 13680377 13680402 7 136 2.5 6.0 4.2 1.3 162 chr2L 13680240 intron CG31814 - chr2L 13680321 intron CG31814 - chr2L 13680402 intron CG31814 - chr2L_7_13680001 chr2L_13680001 RAL-45 175 chr2L 13853087 13853118 chr2L 13862232 13862267 roo 7 9149 4.0 2.5 3.2 1.7 9180 chr2L 13853087 intron CenG1A + chr2L 13857677 intron CenG1A + chr2L 13862267 intron CenG1A + chr2L_7_13855001 chr2L_13855001 RAL-45 176 chr2L 13924145 13924163 chr2L 13924264 13924280 5 119 1.0 0.5 0.8 2.8 135 chr2L 13924145 intron Ance-3 + chr2L 13924212 intron Ance-3 + chr2L 13924280 intron Ance-3 + chr2L_5_13920001 chr2L_13920001 RAL-45 177 chr2L 13971805 13971816 chr2L 13971910 13971921 5 105 4.0 1.5 2.8 1.3 116 chr2L 13971805 exon NimB5 + chr2L 13971863 3` UTR NimB5 + chr2L 13971921 3` UTR NimB5 + chr2L_5_13970001 chr2L_13970001 RAL-45 178 chr2L 14007208 14007235 chr2L 14011505 14011534 6 4299 27.5 23.0 25.2 0.2 4326 chr2L 14007208 intergenic not near genes chr2L 14009371 intergenic not near genes chr2L 14011534 intergenic not near genes chr2L_6_14005001 chr2L_14005001 RAL-45 179 chr2L 14068605 14068615 chr2L 14068684 14068695 6 80 5.5 0.0 2.8 1.6 90 chr2L 14068605 intron nAChRalpha5 + chr2L 14068650 intron nAChRalpha5 + chr2L 14068695 intron nAChRalpha5 + chr2L_6_14065001 chr2L_14065001 RAL-45 180 chr2L 14369124 14369150 chr2L 14369240 14369266 8 116 3.0 2.0 2.5 2.3 142 chr2L 14369124 intergenic not near genes chr2L 14369195 intergenic not near genes chr2L 14369266 intergenic not near genes chr2L_8_14365001 chr2L_14365001 RAL-45 181 chr2L 14564202 14564214 chr2L 14564272 14564277 5 67 5.0 0.5 2.8 1.3 75 chr2L 14564202 intergenic CG3473 - chr2L 14564240 intergenic not near genes chr2L 14564277 intergenic not near genes chr2L_5_14560001 chr2L_14560001 RAL-45 182 chr2L 14564219 14564227 chr2L 14564271 14564277 6 59 2.5 0.5 1.5 2.4 58 chr2L 14564219 intergenic CG3473 - chr2L 14564248 intergenic not near genes chr2L 14564277 intergenic not near genes chr2L_6_14560001 chr2L_14560001 RAL-45 183 chr2L 14586202 14586232 chr2L 14586278 14586312 19 77 3.0 6.0 4.5 3.5 110 chr2L 14586202 intergenic not near genes chr2L 14586257 intergenic not near genes chr2L 14586312 intergenic not near genes chr2L_19_14585001 chr2L_14585001 RAL-45 184 chr2L 14705492 14705510 chr2L 14705575 14705593 6 83 0.5 1.5 1.0 3.0 101 chr2L 14705492 intergenic not near genes chr2L 14705542 intergenic not near genes chr2L 14705593 intergenic not near genes chr2L_6_14705001 chr2L_14705001 RAL-45 185 chr2L 14707208 14707240 chr2L 14707327 14707359 6 117 0.5 0.0 0.2 5.0 151 chr2L 14707208 intergenic not near genes chr2L 14707284 intergenic not near genes chr2L 14707359 intergenic not near genes chr2L_6_14705001 chr2L_14705001 RAL-45 186 chr2L 14747531 14747563 chr2L 14747618 14747649 5 87 1.5 2.0 1.8 1.8 118 chr2L 14747531 intergenic not near genes chr2L 14747590 intergenic not near genes chr2L 14747649 intergenic not near genes chr2L_5_14745001 chr2L_14745001 RAL-45 187 chr2L 14778812 14778836 chr2L 14779096 14779108 7 280 1.5 11.0 6.2 1.0 296 chr2L 14778812 intergenic not near genes chr2L 14778960 intergenic not near genes chr2L 14779108 intergenic not near genes chr2L_7_14775001 chr2L_14775001 RAL-45 188 chr2L 14803877 14803911 chr2L 14809080 14809114 copia 8 5201 2.0 1.5 1.8 2.9 5237 chr2L 14803877 intergenic not near genes chr2L 14806496 intergenic not near genes chr2L 14809114 intergenic not near genes chr2L_8_14805001 chr2L_14805001 RAL-45 189 chr2L 14813407 14813439 chr2L 14813581 14813613 9 172 3.0 2.0 2.5 2.6 206 chr2L 14813407 intergenic not near genes chr2L 14813510 intergenic not near genes chr2L 14813613 intergenic not near genes chr2L_9_14810001 chr2L_14810001 RAL-45 190 chr2L 14889951 14889986 chr2L 14890376 14890411 jockey 13 425 2.5 2.0 2.2 4.1 460 chr2L 14889951 intergenic not near genes chr2L 14890181 intergenic not near genes chr2L 14890411 intergenic not near genes chr2L_13_14890001 chr2L_14890001 RAL-45 191 chr2L 15003553 15003570 chr2L 15003637 15003654 5 84 1.5 3.0 2.2 1.6 101 chr2L 15003553 intergenic not near genes chr2L 15003604 intergenic not near genes chr2L 15003654 intergenic not near genes chr2L_5_15000001 chr2L_15000001 RAL-45 192 chr2L 15111377 15111412 chr2L 15111453 15111488 8 76 2.0 5.0 3.5 1.8 111 chr2L 15111377 intron CG15269 + chr2L 15111432 intron CG15269 + chr2L 15111488 intron CG15269 + chr2L_8_15110001 chr2L_15110001 RAL-45 193 chr2L 15240222 15240251 chr2L 15240333 15240362 6 111 0.0 4.5 2.2 1.9 140 chr2L 15240222 intron ZnT35C - chr2L 15240292 intron ZnT35C - chr2L 15240362 intron ZnT35C - chr2L_6_15240001 chr2L_15240001 RAL-45 194 chr2L 15283882 15283901 chr2L 15284174 15284193 13 292 4.5 2.5 3.5 2.9 311 chr2L 15283882 intergenic not near genes chr2L 15284038 intergenic not near genes chr2L 15284193 intergenic not near genes chr2L_13_15280001 chr2L_15280001 RAL-45 195 chr2L 15309352 15309383 chr2L 15309455 15309486 9 103 1.0 1.0 1.0 4.5 134 chr2L 15309352 intergenic not near genes chr2L 15309419 intergenic not near genes chr2L 15309486 intergenic not near genes chr2L_9_15305001 chr2L_15305001 RAL-45 196 chr2L 15341097 15341122 chr2L 15341178 15341203 6 81 2.0 1.5 1.8 2.1 106 chr2L 15341097 intergenic not near genes chr2L 15341150 intergenic not near genes chr2L 15341203 intergenic not near genes chr2L_6_15340001 chr2L_15340001 RAL-45 197 chr2L 15500635 15500666 chr2L 15506145 15506175 6 5512 5.0 34.5 19.8 0.3 5540 chr2L 15500635 intron lace + chr2L 15503405 exon lace + chr2L 15506175 intergenic not near genes chr2L_6_15500001 chr2L_15500001 RAL-45 198 chr2L 15510935 15510967 chr2L 15511029 15511061 10 93 1.0 5.5 3.2 2.4 126 chr2L 15510935 intergenic not near genes chr2L 15510998 intergenic not near genes chr2L 15511061 intergenic not near genes chr2L_10_15510001 chr2L_15510001 RAL-45 199 chr2L 15535884 15535918 chr2L 15535974 15536008 9 90 4.0 2.0 3.0 2.2 124 chr2L 15535884 intergenic not near genes chr2L 15535946 intergenic not near genes chr2L 15536008 intergenic not near genes chr2L_9_15535001 chr2L_15535001 RAL-45 200 chr2L 15626368 15626385 chr2L 15626446 15626460 5 78 1.5 4.5 3.0 1.2 92 chr2L 15626368 intergenic not near genes chr2L 15626414 intergenic not near genes chr2L 15626460 intergenic not near genes chr2L_5_15625001 chr2L_15625001 RAL-45 201 chr2L 15817780 15817811 chr2L 15818953 15818982 10 1173 16.0 6.0 11.0 0.8 1202 chr2L 15817780 intergenic not near genes chr2L 15818381 intergenic not near genes chr2L 15818982 intergenic not near genes chr2L_10_15815001 chr2L_15815001 RAL-45 202 chr2L 15817032 15817058 chr2L 15819164 15819190 5 2132 22.0 18.0 20.0 0.2 2158 chr2L 15817032 intergenic not near genes chr2L 15818111 intergenic not near genes chr2L 15819190 intergenic not near genes chr2L_5_15815001 chr2L_15815001 RAL-45 203 chr2L 15956026 15956057 chr2L 15957490 15957520 hobo 5 1461 3.0 3.0 3.0 1.2 1494 chr2L 15956026 intron beat-Ib - chr2L 15956773 intron beat-Ib - chr2L 15957520 intron beat-Ib - chr2L_5_15955001 chr2L_15955001 RAL-45 204 chr2L 15960853 15960860 chr2L 15961174 15961181 4 321 6.5 3.5 5.0 0.7 328 chr2L 15960853 intron,5` UTR beat-Ib -,CR43803 + chr2L 15961017 intron,5` UTR beat-Ib -,CR43803 + chr2L 15961181 intron,5` UTR beat-Ib -,CR43803 + chr2L_4_15960001 chr2L_15960001 RAL-45 205 chr2L 16016431 16016460 chr2L 16016508 16016535 8 77 3.5 3.5 3.5 1.8 104 chr2L 16016431 intron beat-Ic + chr2L 16016483 intron beat-Ic + chr2L 16016535 intron beat-Ic + chr2L_8_16015001 chr2L_16015001 RAL-45 206 chr2L 16058128 16058145 chr2L 16058269 16058286 4 141 1.5 1.0 1.2 1.8 158 chr2L 16058128 intron beat-Ia + chr2L 16058207 intron beat-Ia + chr2L 16058286 intron beat-Ia + chr2L_4_16055001 chr2L_16055001 RAL-45 207 chr2L 16071771 16071771 chr2L 16217660 16217661 copia 8 145889 21.5 18.5 20.0 0.4 145890 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217661 intergenic not near genes chr2L_8_16140001 chr2L_16140001 RAL-45 208 chr2L 16141165 16141196 chr2L 16146372 16146403 copia 7 5207 1.0 0.5 0.8 3.9 5238 chr2L 16141165 intergenic not near genes chr2L 16143784 intergenic not near genes chr2L 16146403 intergenic not near genes chr2L_7_16140001 chr2L_16140001 RAL-45 209 chr2L 16204567 16204583 chr2L 16204648 16204663 5 81 2.0 1.0 1.5 2.0 96 chr2L 16204567 intergenic not near genes chr2L 16204615 intergenic not near genes chr2L 16204663 intergenic not near genes chr2L_5_16200001 chr2L_16200001 RAL-45 210 chr2L 9084339 9084340 chr2L 16217660 16217660 11 7133320 15.0 18.5 16.8 0.6 7133321 chr2L 9084339 intron Toll-4 + chr2L 12651000 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_11_12650001 chr2L_12650001 RAL-45 211 chr2L 16071771 16071771 chr2L 16217660 16217661 copia 17 145889 21.5 18.5 20.0 0.8 145890 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217661 intergenic not near genes chr2L_17_16140001 chr2L_16140001 RAL-45 212 chr2L 16226185 16226211 chr2L 16226272 16226298 4 87 2.0 1.0 1.5 1.6 113 chr2L 16226185 intergenic not near genes chr2L 16226242 intergenic not near genes chr2L 16226298 intergenic not near genes chr2L_4_16225001 chr2L_16225001 RAL-45 213 chr2L 16280266 16280291 chr2L 16281431 16281455 1360 8 1165 7.0 7.5 7.2 1.0 1189 chr2L 16280266 intron crp - chr2L 16280860 intron crp - chr2L 16281455 intron crp - chr2L_8_16280001 chr2L_16280001 RAL-45 214 chr2L 16455811 16455840 chr2L 16455894 16455923 10 83 1.0 0.5 0.8 5.6 112 chr2L 16455811 intergenic not near genes chr2L 16455867 intergenic not near genes chr2L 16455923 intergenic not near genes chr2L_10_16455001 chr2L_16455001 RAL-45 215 chr2L 16504109 16504124 chr2L 16504342 16504357 7 233 2.0 0.5 1.2 3.2 248 chr2L 16504109 intron Tpr2 + chr2L 16504233 intron Tpr2 + chr2L 16504357 intron Tpr2 + chr2L_7_16500001 chr2L_16500001 RAL-45 216 chr2L 16952692 16952713 chr2L 16952801 16952822 7 109 4.0 2.0 3.0 1.8 130 chr2L 16952692 intergenic not near genes chr2L 16952757 intergenic not near genes chr2L 16952822 intergenic not near genes chr2L_7_16950001 chr2L_16950001 RAL-45 217 chr2L 17000117 17000148 chr2L 17000239 17000270 6 122 0.0 2.0 1.0 3.0 153 chr2L 17000117 intergenic not near genes chr2L 17000194 intergenic not near genes chr2L 17000270 intergenic not near genes chr2L_6_17000001 chr2L_17000001 RAL-45 218 chr2L 17053284 17053300 chr2L 17053694 17053709 7 410 2.0 1.5 1.8 2.5 425 chr2L 17053284 intergenic not near genes chr2L 17053496 intergenic not near genes chr2L 17053709 intergenic not near genes chr2L_7_17050001 chr2L_17050001 RAL-45 219 chr2L 17122783 17122806 chr2L 17122868 17122891 7 84 2.0 2.0 2.0 2.3 108 chr2L 17122783 intergenic not near genes chr2L 17122837 intergenic CG31784 - chr2L 17122891 intergenic CG31784 - chr2L_7_17120001 chr2L_17120001 RAL-45 220 chr2L 17264741 17264772 chr2L 17264821 17264852 5 80 1.5 1.0 1.2 2.3 111 chr2L 17264741 intergenic not near genes chr2L 17264796 intergenic not near genes chr2L 17264852 intergenic not near genes chr2L_5_17260001 chr2L_17260001 RAL-45 221 chr2L 17273189 17273226 chr2L 17277972 17278008 F-element 10 4783 5.0 3.0 4.0 2.0 4819 chr2L 17273189 intergenic not near genes chr2L 17275598 intergenic not near genes chr2L 17278008 intergenic not near genes chr2L_10_17275001 chr2L_17275001 RAL-45 222 chr2L 17292903 17292912 chr2L 17292980 17292990 5 78 2.5 2.5 2.5 1.4 87 chr2L 17292903 intergenic not near genes chr2L 17292946 intergenic not near genes chr2L 17292990 intergenic not near genes chr2L_5_17290001 chr2L_17290001 RAL-45 223 chr2L 17319112 17319147 chr2L 17319188 17319222 16 75 1.5 1.5 1.5 6.4 110 chr2L 17319112 3` UTR CR45696 - chr2L 17319167 3` UTR CR45696 - chr2L 17319222 3` UTR CR45696 - chr2L_16_17315001 chr2L_17315001 RAL-45 224 chr2L 17380450 17380480 chr2L 17380720 17380749 6 268 1.5 0.5 1.0 3.0 299 chr2L 17380450 intron Lrch - chr2L 17380600 intron Lrch - chr2L 17380749 intron Lrch - chr2L_6_17380001 chr2L_17380001 RAL-45 225 chr2L 17466429 17466454 chr2L 17466522 17466547 4 93 0.0 5.5 2.8 1.1 118 chr2L 17466429 intron BicD - chr2L 17466488 intron BicD - chr2L 17466547 intron BicD - chr2L_4_17465001 chr2L_17465001 RAL-45 226 chr2L 17578270 17578293 chr2L 17578415 17578438 7 144 2.0 4.0 3.0 1.8 168 chr2L 17578270 intergenic not near genes chr2L 17578354 intergenic not near genes chr2L 17578438 intergenic not near genes chr2L_7_17575001 chr2L_17575001 RAL-45 227 chr2L 17613454 17613479 chr2L 17613651 17613676 7 197 2.0 1.5 1.8 2.5 222 chr2L 17613454 intergenic not near genes chr2L 17613565 intergenic not near genes chr2L 17613676 intergenic not near genes chr2L_7_17610001 chr2L_17610001 RAL-45 228 chr2L 17727870 17727882 chr2L 17729337 17729349 hobo 6 1467 2.5 3.0 2.8 1.6 1479 chr2L 17727870 intron CadN - chr2L 17728610 intron CadN - chr2L 17729349 intron CadN - chr2L_6_17725001 chr2L_17725001 RAL-45 229 chr2L 17819921 17819954 chr2L 17825124 17825157 copia 4 5203 1.0 4.0 2.5 1.1 5236 chr2L 17819921 intron CadN2 - chr2L 17822539 intron CadN2 - chr2L 17825157 intron CadN2 - chr2L_4_17820001 chr2L_17820001 RAL-45 230 chr2L 17855517 17855528 chr2L 17855595 17855600 5 75 4.0 1.0 2.5 1.4 83 chr2L 17855517 intron CadN2 - chr2L 17855558 intron CadN2 - chr2L 17855600 intron CadN2 - chr2L_5_17855001 chr2L_17855001 RAL-45 231 chr2L 17911957 17911986 chr2L 17914135 17914164 pogo 8 2178 3.5 2.5 3.0 2.0 2207 chr2L 17911957 intergenic not near genes chr2L 17913060 intergenic not near genes chr2L 17914164 intergenic CG43271 - chr2L_8_17910001 chr2L_17910001 RAL-45 232 chr2L 18051878 18051905 chr2L 18061025 18061038 roo 8 9145 1.5 1.5 1.5 3.2 9160 chr2L 18051878 intron rdo + chr2L 18056458 intron rdo + chr2L 18061038 intron rdo + chr2L_8_18055001 chr2L_18055001 RAL-45 233 chr2L 18254811 18254839 chr2L 18254911 18254939 7 99 2.5 1.0 1.8 2.5 128 chr2L 18254811 intron CG42750 - chr2L 18254875 intron CG42750 - chr2L 18254939 intron CG42750 - chr2L_7_18250001 chr2L_18250001 RAL-45 234 chr2L 18274041 18274075 chr2L 18274126 18274161 9 82 0.5 2.5 1.5 3.6 120 chr2L 18274041 intron CG42750 - chr2L 18274101 intron CG42750 - chr2L 18274161 intron CG42750 - chr2L_9_18270001 chr2L_18270001 RAL-45 235 chr2L 18303981 18304006 chr2L 18304072 18304073 6 87 0.5 1.0 0.8 3.3 92 chr2L 18303981 intergenic not near genes chr2L 18304027 intergenic not near genes chr2L 18304073 intergenic not near genes chr2L_6_18300001 chr2L_18300001 RAL-45 236 chr2L 18334617 18334640 chr2L 18334701 18334725 8 85 2.0 2.0 2.0 2.7 108 chr2L 18334617 intron Fas3 + chr2L 18334671 intron Fas3 + chr2L 18334725 intron Fas3 + chr2L_8_18330001 chr2L_18330001 RAL-45 237 chr2L 18408028 18408055 chr2L 18412812 18412839 Doc 7 4784 2.0 0.0 1.0 3.5 4811 chr2L 18408028 intergenic not near genes chr2L 18410434 intergenic not near genes chr2L 18412839 intergenic not near genes chr2L_7_18410001 chr2L_18410001 RAL-45 238 chr2L 18664579 18664607 chr2L 18664652 18664683 6 76 0.0 2.0 1.0 3.0 104 chr2L 18664579 intergenic not near genes chr2L 18664631 intergenic not near genes chr2L 18664683 intergenic not near genes chr2L_6_18660001 chr2L_18660001 RAL-45 239 chr2L 18812569 18812581 chr2L 18812832 18812843 5 263 4.0 5.5 4.8 0.9 274 chr2L 18812569 intergenic CG17325 +,CG42305 + chr2L 18812706 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812843 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_5_18810001 chr2L_18810001 RAL-45 240 chr2L 18898396 18898423 chr2L 18898478 18898504 8 80 4.0 0.5 2.2 2.5 108 chr2L 18898396 intergenic not near genes chr2L 18898450 intergenic not near genes chr2L 18898504 intergenic not near genes chr2L_8_18895001 chr2L_18895001 RAL-45 241 chr2L 19024096 19024097 chr2L 21768291 21768294 7 2744195 8.0 16.5 12.2 0.5 2744198 chr2L 19024096 3` UTR CR43700 - chr2L 20396195 intron CG10947 - chr2L 21768294 intron CG31612 - chr2L_7_20395001 chr2L_20395001 RAL-45 242 chr2L 19122770 19122806 chr2L 19122849 19122885 11 78 2.0 1.5 1.8 3.9 115 chr2L 19122770 exon l(2)37Cc - chr2L 19122828 intron l(2)37Cc - chr2L 19122885 intron l(2)37Cc - chr2L_11_19120001 chr2L_19120001 RAL-45 243 chr2L 19147378 19147386 chr2L 19154413 19154421 297 4 7035 3.0 3.0 3.0 1.0 7043 chr2L 19147378 intron brat + chr2L 19150900 intron brat + chr2L 19154421 intron brat + chr2L_4_19150001 chr2L_19150001 RAL-45 244 chr2L 19237303 19237339 chr2L 19237403 19237403 10 96 3.0 3.0 3.0 2.5 100 chr2L 19237303 intergenic not near genes chr2L 19237353 intergenic not near genes chr2L 19237403 intergenic not near genes chr2L_10_19235001 chr2L_19235001 RAL-45 245 chr2L 19246827 19246847 chr2L 19246907 19246927 6 80 1.0 2.0 1.5 2.4 100 chr2L 19246827 intergenic not near genes chr2L 19246877 intergenic not near genes chr2L 19246927 intergenic not near genes chr2L_6_19245001 chr2L_19245001 RAL-45 246 chr2L 19256036 19256059 chr2L 19256259 19256282 6 224 12.0 4.5 8.2 0.7 246 chr2L 19256036 intergenic not near genes chr2L 19256159 intergenic not near genes chr2L 19256282 intergenic not near genes chr2L_6_19255001 chr2L_19255001 RAL-45 247 chr2L 19338009 19338034 chr2L 19338092 19338110 13 80 5.0 5.0 5.0 2.2 101 chr2L 19338009 intergenic not near genes chr2L 19338060 intergenic not near genes chr2L 19338110 intergenic not near genes chr2L_13_19335001 chr2L_19335001 RAL-45 248 chr2L 19357545 19357569 chr2L 19357635 19357659 5 90 2.5 1.0 1.8 1.8 114 chr2L 19357545 intron dnt - chr2L 19357602 intron dnt - chr2L 19357659 intron dnt - chr2L_5_19355001 chr2L_19355001 RAL-45 249 chr2L 19441066 19441089 chr2L 19441143 19441166 4 77 3.0 3.0 3.0 1.0 100 chr2L 19441066 intron CG10237 - chr2L 19441116 intron CG10237 - chr2L 19441166 5` UTR CG10237 - chr2L_4_19440001 chr2L_19440001 RAL-45 250 chr2L 19558524 19558543 chr2L 19558628 19558647 5 104 2.0 0.0 1.0 2.5 123 chr2L 19558524 intron Tep5 + chr2L 19558586 intron Tep5 + chr2L 19558647 intron Tep5 + chr2L_5_19555001 chr2L_19555001 RAL-45 251 chr2L 19560847 19560860 chr2L 19560927 19560940 5 80 3.0 0.0 1.5 2.0 93 chr2L 19560847 intron Tep5 + chr2L 19560894 exon Tep5 + chr2L 19560940 exon Tep5 + chr2L_5_19560001 chr2L_19560001 RAL-45 252 chr2L 19562544 19562562 chr2L 19562624 19562642 11 80 0.0 8.0 4.0 2.2 98 chr2L 19562544 intron Tep5 + chr2L 19562593 intron Tep5 + chr2L 19562642 exon Tep5 + chr2L_11_19560001 chr2L_19560001 RAL-45 253 chr2L 19612966 19612992 chr2L 19613058 19613080 9 90 2.5 3.5 3.0 2.2 114 chr2L 19612966 intron Lar + chr2L 19613023 intron Lar + chr2L 19613080 intron Lar + chr2L_9_19610001 chr2L_19610001 RAL-45 254 chr2L 19620091 19620131 chr2L 19621080 19621105 jockey 16 986 4.0 4.5 4.2 3.1 1014 chr2L 19620091 intron Lar + chr2L 19620598 intron Lar + chr2L 19621105 intron Lar + chr2L_16_19620001 chr2L_19620001 RAL-45 255 chr2L 19652573 19652593 chr2L 19674007 19674027 opus 4 21434 2.0 0.5 1.2 1.8 21454 chr2L 19652573 intron Lar + chr2L 19663300 intron Lar + chr2L 19674027 intron Lar + chr2L_4_19660001 chr2L_19660001 RAL-45 256 chr2L 19689071 19689089 chr2L 19689172 19689193 5 103 1.5 2.5 2.0 1.7 122 chr2L 19689071 intron Lar + chr2L 19689132 intron Lar + chr2L 19689193 intron Lar + chr2L_5_19685001 chr2L_19685001 RAL-45 257 chr2L 19697134 19697169 chr2L 19697227 19697260 13 93 2.0 4.0 3.0 3.2 126 chr2L 19697134 intron Lar + chr2L 19697197 intron Lar + chr2L 19697260 intron Lar + chr2L_13_19695001 chr2L_19695001 RAL-45 258 chr2L 19703554 19703570 chr2L 19712690 19712704 roo 4 9135 3.0 1.5 2.2 1.2 9150 chr2L 19703554 intron Lar + chr2L 19708129 intron Lar + chr2L 19712704 intron Lar + chr2L_4_19705001 chr2L_19705001 RAL-45 259 chr2L 19712691 19712705 chr2L 19712775 19712782 6 81 2.0 3.5 2.8 1.6 91 chr2L 19712691 intron Lar + chr2L 19712736 intron Lar + chr2L 19712782 intron Lar + chr2L_6_19710001 chr2L_19710001 RAL-45 260 chr2L 19712707 19712720 chr2L 19712772 19712803 10 79 2.0 2.5 2.2 3.1 96 chr2L 19712707 intron Lar + chr2L 19712755 intron Lar + chr2L 19712803 intron Lar + chr2L_10_19710001 chr2L_19710001 RAL-45 261 chr2L 19716696 19716719 chr2L 19716806 19716828 11 109 2.0 5.0 3.5 2.4 132 chr2L 19716696 intron Lar + chr2L 19716762 intron Lar + chr2L 19716828 intron Lar + chr2L_11_19715001 chr2L_19715001 RAL-45 262 chr2L 19730667 19730683 chr2L 19730731 19730754 5 75 3.5 2.0 2.8 1.3 87 chr2L 19730667 3` UTR Lar + chr2L 19730710 3` UTR Lar + chr2L 19730754 3` UTR Lar + chr2L_5_19730001 chr2L_19730001 RAL-45 263 chr2L 19737359 19737388 chr2L 19740823 19740842 1360 11 3465 2.5 3.5 3.0 2.8 3483 chr2L 19737359 intergenic Nf-YB + chr2L 19739100 intergenic not near genes chr2L 19740842 intergenic not near genes chr2L_11_19735001 chr2L_19735001 RAL-45 264 chr2L 19773062 19773067 chr2L 19773252 19773256 4 190 0.5 1.0 0.8 2.2 194 chr2L 19773062 intergenic not near genes chr2L 19773159 intergenic not near genes chr2L 19773256 intergenic not near genes chr2L_4_19770001 chr2L_19770001 RAL-45 265 chr2L 19837278 19837310 chr2L 19837358 19837390 15 80 4.5 0.5 2.5 4.3 112 chr2L 19837278 intron sick + chr2L 19837334 intron sick + chr2L 19837390 intron sick + chr2L_15_19835001 chr2L_19835001 RAL-45 266 chr2L 19848526 19848542 chr2L 19848635 19848652 7 108 4.5 4.0 4.2 1.3 126 chr2L 19848526 intron sick + chr2L 19848589 intron sick + chr2L 19848652 intron sick + chr2L_7_19845001 chr2L_19845001 RAL-45 267 chr2L 19963481 19963515 chr2L 19963559 19963588 11 76 1.0 2.0 1.5 4.4 107 chr2L 19963481 exon CG16772 + chr2L 19963534 exon CG16772 + chr2L 19963588 exon CG16772 + chr2L_11_19960001 chr2L_19960001 RAL-45 268 chr2L 19994657 19994687 chr2L 19994731 19994766 5 79 2.0 2.0 2.0 1.7 109 chr2L 19994657 intron CG43861 - chr2L 19994712 intron CG43861 - chr2L 19994766 intron CG43861 - chr2L_5_19990001 chr2L_19990001 RAL-45 269 chr2L 20085464 20085490 chr2L 20085556 20085564 17 91 1.0 3.0 2.0 5.7 100 chr2L 20085464 intron neb + chr2L 20085514 intron neb + chr2L 20085564 intron neb + chr2L_17_20085001 chr2L_20085001 RAL-45 270 chr2L 20268929 20268948 chr2L 20269063 20269091 7 142 2.5 1.5 2.0 2.3 162 chr2L 20268929 intergenic not near genes chr2L 20269010 intergenic not near genes chr2L 20269091 intergenic not near genes chr2L_7_20265001 chr2L_20265001 RAL-45 271 chr2L 20498694 20498699 chr2L 20498793 20498798 5 99 3.0 4.0 3.5 1.1 104 chr2L 20498694 intergenic not near genes chr2L 20498746 intergenic not near genes chr2L 20498798 intergenic not near genes chr2L_5_20495001 chr2L_20495001 RAL-45 272 chr2L 20575053 20575079 chr2L 20575338 20575364 6 284 0.5 0.5 0.5 4.0 311 chr2L 20575053 intron CR45347 + chr2L 20575208 intron CR45347 + chr2L 20575364 intron CR45347 + chr2L_6_20575001 chr2L_20575001 RAL-45 273 chr2L 20576220 20576242 chr2L 20583688 20583710 blood 8 7468 2.0 2.0 2.0 2.7 7490 chr2L 20576220 intergenic CR45347 + chr2L 20579965 intergenic not near genes chr2L 20583710 3` UTR CR44909 - chr2L_8_20575001 chr2L_20575001 RAL-45 274 chr2L 20607648 20607672 chr2L 20607723 20607751 10 77 1.5 3.0 2.2 3.1 103 chr2L 20607648 intron,3` UTR CR44909 -,CR43608 - chr2L 20607700 intron,3` UTR CR44909 -,CR43608 - chr2L 20607751 intron,3` UTR CR44909 -,CR43608 - chr2L_10_20605001 chr2L_20605001 RAL-45 275 chr2L 20639522 20639531 chr2L 20639793 20639807 INE-1 4 275 1.0 5.0 3.0 1.0 285 chr2L 20639522 intergenic not near genes chr2L 20639664 intergenic CG31680 + chr2L 20639807 intergenic CG31680 + chr2L_4_20635001 chr2L_20635001 RAL-45 276 chr2L 20818516 20818530 chr2L 20818597 20818611 4 79 3.0 3.0 3.0 1.0 95 chr2L 20818516 exon CheB38a - chr2L 20818564 intergenic CheB38a - chr2L 20818611 intergenic CheB38a - chr2L_4_20815001 chr2L_20815001 RAL-45 277 chr2L 20879813 20879842 chr2L 20879895 20879925 8 82 4.0 5.0 4.5 1.5 112 chr2L 20879813 intron,intron CG43739 -,sky - chr2L 20879869 intron,intron CG43739 -,sky - chr2L 20879925 intron,intron CG43739 -,sky - chr2L_8_20875001 chr2L_20875001 RAL-45 278 chr2L 20901476 20901486 chr2L 20902640 20902650 1360 4 1164 1.0 4.5 2.8 1.1 1174 chr2L 20901476 intron,intron CG43739 -,sky - chr2L 20902063 intron,intron CG43739 -,sky - chr2L 20902650 intron,intron CG43739 -,sky - chr2L_4_20900001 chr2L_20900001 RAL-45 279 chr2L 20976649 20976673 chr2L 20981464 20981488 X-element 5 4815 1.0 3.0 2.0 1.7 4839 chr2L 20976649 intron CG42238 - chr2L 20979068 intron CG42238 - chr2L 20981488 intron CG42238 - chr2L_5_20975001 chr2L_20975001 RAL-45 280 chr2L 21020272 21020301 chr2L 21023949 21023977 NOF 5 3677 4.0 1.5 2.8 1.3 3705 chr2L 21020272 intron CG42238 - chr2L 21022124 intron CG42238 - chr2L 21023977 intron CG42238 - chr2L_5_21020001 chr2L_21020001 RAL-45 281 chr2L 21041135 21041168 chr2L 21049396 21049429 Tirant 10 8261 1.5 4.0 2.8 2.6 8294 chr2L 21041135 intron CG42238 - chr2L 21045282 intron CG42238 - chr2L 21049429 intron CG42238 - chr2L_10_21045001 chr2L_21045001 RAL-45 282 chr2L 21154165 21154188 chr2L 21154242 21154265 5 77 0.0 0.5 0.2 4.2 100 chr2L 21154165 intergenic E2f2 - chr2L 21154215 intergenic E2f2 - chr2L 21154265 intergenic E2f2 - chr2L_5_21150001 chr2L_21150001 RAL-45 283 chr2L 21193042 21193065 chr2L 21193238 21193261 9 195 1.5 1.5 1.5 3.6 219 chr2L 21193042 intron Ret - chr2L 21193152 intron Ret - chr2L 21193261 intron Ret - chr2L_9_21190001 chr2L_21190001 RAL-45 284 chr2L 21573808 21573835 chr2L 21573891 21573924 4 88 1.5 1.0 1.2 1.8 116 chr2L 21573808 intron Lamp1 + chr2L 21573866 intron Lamp1 + chr2L 21573924 intron Lamp1 + chr2L_4_21570001 chr2L_21570001 RAL-45 285 chr2L 21806225 21806248 chr2L 21806328 21806350 4 103 0.0 1.0 0.5 2.7 125 chr2L 21806225 intergenic not near genes chr2L 21806288 intergenic not near genes chr2L 21806350 intergenic not near genes chr2L_4_21805001 chr2L_21805001 RAL-45 286 chr2L 21855481 21855514 chr2L 21855567 21855601 5 87 0.5 1.5 1.0 2.5 120 chr2L 21855481 intron CR44917 + chr2L 21855541 intron CR44917 + chr2L 21855601 intron CR44917 + chr2L_5_21855001 chr2L_21855001 RAL-45 287 chr2L 21859320 21859347 chr2L 21859400 21859426 14 79 5.5 4.5 5.0 2.3 106 chr2L 21859320 intron CR44917 + chr2L 21859373 intron CR44917 + chr2L 21859426 intron CR44917 + chr2L_14_21855001 chr2L_21855001 RAL-45 288 chr2L 21950928 21950955 chr2L 21951342 21951361 10 415 4.5 4.5 4.5 1.8 433 chr2L 21950928 5` UTR CR45703 + chr2L 21951144 5` UTR CR45703 + chr2L 21951361 intergenic CR45703 + chr2L_10_21950001 chr2L_21950001 RAL-45 289 chr2L 21981683 21981713 chr2L 21990848 21990873 roo 7 9164 2.5 5.5 4.0 1.4 9190 chr2L 21981683 exon CG2528 - chr2L 21986278 intron CG2528 - chr2L 21990873 exon CG2528 - chr2L_7_21985001 chr2L_21985001 RAL-45 290 chr2L 22192022 22192054 chr2L 22192111 22192143 5 87 2.5 1.5 2.0 1.7 121 chr2L 22192022 intron Ir40a - chr2L 22192082 intron Ir40a - chr2L 22192143 intron Ir40a - chr2L_5_22190001 chr2L_22190001 RAL-45 291 chr2L 22239428 22239461 chr2L 22239509 22239542 5 81 2.0 0.5 1.2 2.3 114 chr2L 22239428 3` UTR CR43765 - chr2L 22239485 3` UTR CR43765 - chr2L 22239542 3` UTR CR43765 - chr2L_5_22235001 chr2L_22235001 RAL-45 292 chr2L 22258615 22258648 chr2L 22260739 22260771 G6 6 2124 1.5 2.0 1.8 2.1 2156 chr2L 22258615 intergenic Tif-IA + chr2L 22259693 intergenic not near genes chr2L 22260771 intergenic not near genes chr2L_6_22255001 chr2L_22255001 RAL-45 293 chr2L 22357061 22357084 chr2L 22357207 22357213 4 142 3.5 2.5 3.0 1.0 152 chr2L 22357061 intron CG17018 + chr2L 22357137 intron CG17018 + chr2L 22357213 intron CG17018 + chr2L_4_22355001 chr2L_22355001 RAL-45 294 chr2L 22548921 22548934 chr2L 22550145 22550159 1360 6 1225 0.0 1.0 0.5 4.0 1238 chr2L 22548921 intergenic CG17490 + chr2L 22549540 intergenic not near genes chr2L 22550159 intergenic CG17493 + chr2L_6_22545001 chr2L_22545001 RAL-45 295 chr2R 529323 529356 chr2R 537948 537981 Max-element 7 8622 2.0 3.5 2.8 1.8 8658 chr2R 529323 intron CG40378 + chr2R 533652 intron CG40378 + chr2R 537981 intron CG40378 + chr2R_7_530001 chr2R_530001 RAL-45 296 chr2R 552754 552789 chr2R 553971 553988 1360 11 1212 1.5 3.0 2.2 3.4 1234 chr2R 552754 intron CG40378 + chr2R 553371 intron CG40378 + chr2R 553988 intron CG40378 + chr2R_11_550001 chr2R_550001 RAL-45 297 chr2R 1082365 1082377 chr2R 1087130 1087153 Doc 5 4774 6.0 3.0 4.5 0.9 4788 chr2R 1082365 intron rl + chr2R 1084759 intron rl + chr2R 1087153 intron rl + chr2R_5_1080001 chr2R_1080001 RAL-45 298 chr2R 2508311 2508336 chr2R 2508449 2508474 4 138 0.5 3.5 2.0 1.3 163 chr2R 2508311 intron MFS17 - chr2R 2508392 intron MFS17 - chr2R 2508474 intron MFS17 - chr2R_4_2505001 chr2R_2505001 RAL-45 299 chr2R 3144095 3144105 chr2R 3393373 3393383 Doc 4 249277 6.0 9.5 7.8 0.5 249288 chr2R 3144095 intron CG42596 + chr2R 3268739 intergenic not near genes chr2R 3393383 intergenic not near genes chr2R_4_3265001 chr2R_3265001 RAL-45 300 chr2R 3291928 3292102 chr2R 3915097 3915263 8 623167 7.5 11.5 9.5 0.8 623335 chr2R 3291928 intergenic not near genes chr2R 3603596 intergenic not near genes chr2R 3915263 intron uex - chr2R_8_3600001 chr2R_3600001 RAL-45 301 chr2R 4621317 4621345 chr2R 4621857 4621885 9 540 0.5 2.0 1.2 4.1 568 chr2R 4621317 3` UTR CR44101 - chr2R 4621601 3` UTR CR44101 - chr2R 4621885 3` UTR CR44101 - chr2R_9_4620001 chr2R_4620001 RAL-45 302 chr2R 4622954 4622988 chr2R 4624112 4624147 1360 9 1159 1.5 2.0 1.8 3.2 1193 chr2R 4622954 intergenic CR44101 - chr2R 4623550 intergenic not near genes chr2R 4624147 intergenic not near genes chr2R_9_4620001 chr2R_4620001 RAL-45 303 chr2R 4690639 4690669 chr2R 4690729 4690759 17 88 1.5 2.5 2.0 5.7 120 chr2R 4690639 intergenic not near genes chr2R 4690699 intergenic not near genes chr2R 4690759 intergenic not near genes chr2R_17_4690001 chr2R_4690001 RAL-45 304 chr2R 4745524 4745533 chr2R 4747119 4747137 4 1602 2.5 1.0 1.8 1.4 1613 chr2R 4745524 intron conu + chr2R 4746330 intron conu + chr2R 4747137 intron conu + chr2R_4_4745001 chr2R_4745001 RAL-45 305 chr2R 4782779 4782794 chr2R 4782879 4782895 4 101 0.0 3.0 1.5 1.6 116 chr2R 4782779 intergenic not near genes chr2R 4782837 intergenic not near genes chr2R 4782895 intergenic not near genes chr2R_4_4780001 chr2R_4780001 RAL-45 306 chr2R 4815767 4815798 chr2R 4815852 4815883 14 84 5.0 5.0 5.0 2.3 116 chr2R 4815767 3` UTR CG17528 - chr2R 4815825 3` UTR CG17528 - chr2R 4815883 3` UTR CG17528 - chr2R_14_4815001 chr2R_4815001 RAL-45 307 chr2R 4933373 4933389 chr2R 4933925 4933952 7 559 2.0 2.0 2.0 2.3 579 chr2R 4933373 intron Ir41a + chr2R 4933662 intron Ir41a + chr2R 4933952 intron Ir41a + chr2R_7_4930001 chr2R_4930001 RAL-45 308 chr2R 5019275 5019302 chr2R 5019361 5019388 6 86 1.5 1.0 1.2 2.7 113 chr2R 5019275 intron Ir41a + chr2R 5019332 intron Ir41a + chr2R 5019388 intron Ir41a + chr2R_6_5015001 chr2R_5015001 RAL-45 309 chr2R 5038530 5038534 chr2R 5039324 5039331 4 796 1.5 2.5 2.0 1.3 801 chr2R 5038530 intergenic not near genes chr2R 5038930 intergenic not near genes chr2R 5039331 intergenic not near genes chr2R_4_5035001 chr2R_5035001 RAL-45 310 chr2R 5075223 5075237 chr2R 5075350 5075365 9 127 5.0 0.0 2.5 2.6 142 chr2R 5075223 intergenic not near genes chr2R 5075294 intergenic not near genes chr2R 5075365 intergenic not near genes chr2R_9_5075001 chr2R_5075001 RAL-45 311 chr2R 5080792 5080818 chr2R 5080882 5080909 10 90 0.5 1.5 1.0 5.0 117 chr2R 5080792 intergenic not near genes chr2R 5080850 intergenic not near genes chr2R 5080909 intergenic not near genes chr2R_10_5080001 chr2R_5080001 RAL-45 312 chr2R 5476352 5476385 chr2R 5476896 5476929 14 544 4.5 5.0 4.8 2.4 577 chr2R 5476352 intron CG30440 - chr2R 5476640 intron CG30440 - chr2R 5476929 intron CG30440 - chr2R_14_5475001 chr2R_5475001 RAL-45 313 chr2R 5484873 5484890 chr2R 5484960 5484977 5 87 0.0 2.5 1.2 2.3 104 chr2R 5484873 intron CG30440 - chr2R 5484925 intron CG30440 - chr2R 5484977 intron CG30440 - chr2R_5_5480001 chr2R_5480001 RAL-45 314 chr2R 5581397 5581423 chr2R 5627605 5627616 4 46205 1.0 4.5 2.8 1.1 46219 chr2R 5581397 intergenic not near genes chr2R 5604506 exon Fis1 - chr2R 5627616 intergenic not near genes chr2R_4_5600001 chr2R_5600001 RAL-45 315 chr2R 5621373 5621381 chr2R 5621452 5621461 5 79 6.0 0.5 3.2 1.2 88 chr2R 5621373 intergenic not near genes chr2R 5621417 intergenic not near genes chr2R 5621461 intergenic not near genes chr2R_5_5620001 chr2R_5620001 RAL-45 316 chr2R 5741433 5741462 chr2R 5741519 5741550 10 87 2.0 1.5 1.8 3.6 117 chr2R 5741433 intergenic not near genes chr2R 5741492 intergenic not near genes chr2R 5741550 intergenic not near genes chr2R_10_5740001 chr2R_5740001 RAL-45 317 chr2R 5837281 5837288 chr2R 5837361 5837368 4 80 8.0 7.0 7.5 0.5 87 chr2R 5837281 intron dpr12 + chr2R 5837324 intron dpr12 + chr2R 5837368 intron dpr12 + chr2R_4_5835001 chr2R_5835001 RAL-45 318 chr2R 5844590 5844618 chr2R 5844694 5844725 13 107 4.5 3.5 4.0 2.6 135 chr2R 5844590 intron dpr12 + chr2R 5844658 intron dpr12 + chr2R 5844725 intron dpr12 + chr2R_13_5840001 chr2R_5840001 RAL-45 319 chr2R 5869283 5869306 chr2R 5874351 5874382 flea 7 5075 2.0 1.0 1.5 2.8 5099 chr2R 5869283 intergenic not near genes chr2R 5871832 intergenic not near genes chr2R 5874382 intergenic not near genes chr2R_7_5870001 chr2R_5870001 RAL-45 320 chr2R 6096721 6096742 chr2R 6101918 6101934 BS 7 5191 8.0 4.5 6.2 1.0 5213 chr2R 6096721 intron EcR - chr2R 6099328 intron EcR - chr2R 6101934 intron EcR - chr2R_7_6095001 chr2R_6095001 RAL-45 321 chr2R 6129142 6129176 chr2R 6129674 6129708 14 532 2.0 1.0 1.5 5.6 566 chr2R 6129142 intron EcR - chr2R 6129425 intron EcR - chr2R 6129708 intron EcR - chr2R_14_6125001 chr2R_6125001 RAL-45 322 chr2R 6538379 6538415 chr2R 6538457 6538493 9 78 2.5 3.0 2.8 2.4 114 chr2R 6538379 intron jing + chr2R 6538436 intron jing + chr2R 6538493 intron jing + chr2R_9_6535001 chr2R_6535001 RAL-45 323 chr2R 6806791 6806818 chr2R 6806875 6806903 14 84 1.0 2.0 1.5 5.6 112 chr2R 6806791 intergenic not near genes chr2R 6806847 intergenic not near genes chr2R 6806903 intergenic not near genes chr2R_14_6805001 chr2R_6805001 RAL-45 324 chr2R 7139944 7139952 chr2R 7141427 7141443 hopper2 5 1490 3.0 6.0 4.5 0.9 1499 chr2R 7139944 intergenic not near genes chr2R 7140694 intergenic not near genes chr2R 7141443 intergenic not near genes chr2R_5_7140001 chr2R_7140001 RAL-45 325 chr2R 7160571 7160581 chr2R 7160649 7160659 5 78 4.0 4.0 4.0 1.0 88 chr2R 7160571 intron pk + chr2R 7160615 intron pk + chr2R 7160659 intron pk + chr2R_5_7160001 chr2R_7160001 RAL-45 326 chr2R 7235820 7235844 chr2R 7240912 7240936 jockey 6 5092 5.0 3.0 4.0 1.2 5116 chr2R 7235820 intergenic not near genes chr2R 7238378 intergenic not near genes chr2R 7240936 intergenic not near genes chr2R_6_7235001 chr2R_7235001 RAL-45 327 chr2R 7376485 7376501 chr2R 7376565 7376581 4 80 0.0 2.5 1.2 1.8 96 chr2R 7376485 intron Dscam1 - chr2R 7376533 intron Dscam1 - chr2R 7376581 intron Dscam1 - chr2R_4_7375001 chr2R_7375001 RAL-45 328 chr2R 7417905 7418168 chr2R 7417991 7418247 4 80 0.0 1.5 0.8 2.2 342 chr2R 7417905 intergenic not near genes chr2R 7418076 intergenic not near genes chr2R 7418247 intergenic not near genes chr2R_4_7415001 chr2R_7415001 RAL-45 329 chr2R 7459278 7459302 chr2R 7459366 7459390 4 88 0.0 0.5 0.2 3.3 112 chr2R 7459278 intergenic Inos -,CG11141 - chr2R 7459334 intergenic CG11141 -,Inos - chr2R 7459390 intergenic CG11141 - chr2R_4_7455001 chr2R_7455001 RAL-45 330 chr2R 7599468 7599490 chr2R 7599703 7599721 6 234 0.5 3.0 1.8 2.1 253 chr2R 7599468 intron CG1358 - chr2R 7599594 intron CG1358 - chr2R 7599721 intron CG1358 - chr2R_6_7595001 chr2R_7595001 RAL-45 331 chr2R 7608407 7608436 chr2R 7613609 7613637 I-element 7 5199 1.0 1.5 1.2 3.2 5230 chr2R 7608407 intron CG1358 - chr2R 7611022 intron CG1358 - chr2R 7613637 intron CG1358 - chr2R_7_7610001 chr2R_7610001 RAL-45 332 chr2R 7773486 7773512 chr2R 7773565 7773593 10 80 2.5 5.0 3.8 2.1 107 chr2R 7773486 intron,intron CG30497 -,CG45093 - chr2R 7773540 intron,intron CG30497 -,CG45093 - chr2R 7773593 intron,intron CG30497 -,CG45093 - chr2R_10_7770001 chr2R_7770001 RAL-45 333 chr2R 7867973 7868004 chr2R 7868096 7868128 7 120 3.0 4.0 3.5 1.6 155 chr2R 7867973 intron Dgk - chr2R 7868050 intron Dgk - chr2R 7868128 intron Dgk - chr2R_7_7865001 chr2R_7865001 RAL-45 334 chr2R 7869192 7869220 chr2R 7873978 7874002 Doc 7 4785 1.0 3.0 2.0 2.3 4810 chr2R 7869192 intron Dgk - chr2R 7871597 intron Dgk - chr2R 7874002 intron Dgk - chr2R_7_7870001 chr2R_7870001 RAL-45 335 chr2R 7915720 7915728 chr2R 7915812 7915816 4 91 2.0 2.0 2.0 1.3 96 chr2R 7915720 intron CG12159 - chr2R 7915768 intron CG12159 - chr2R 7915816 intron CG12159 - chr2R_4_7915001 chr2R_7915001 RAL-45 336 chr2R 8015648 8015682 chr2R 8017671 8017672 12 2018 1.5 4.0 2.8 3.2 2024 chr2R 8015648 intergenic mir-4981 + chr2R 8016660 intergenic not near genes chr2R 8017672 intergenic not near genes chr2R_12_8015001 chr2R_8015001 RAL-45 337 chr2R 8036261 8036290 chr2R 8036343 8036372 5 82 3.0 1.5 2.2 1.6 111 chr2R 8036261 intron Optix + chr2R 8036316 intron Optix + chr2R 8036372 intron Optix + chr2R_5_8035001 chr2R_8035001 RAL-45 338 chr2R 8076681 8076702 chr2R 8076761 8076782 5 80 5.5 1.5 3.5 1.1 101 chr2R 8076681 intron lig + chr2R 8076732 intron lig + chr2R 8076782 intron lig + chr2R_5_8075001 chr2R_8075001 RAL-45 339 chr2R 8089258 8089283 chr2R 8089344 8089369 5 86 2.0 1.5 1.8 1.8 111 chr2R 8089258 3` UTR sut2 + chr2R 8089314 intergenic sut2 +,sut3 + chr2R 8089369 intergenic sut2 +,sut3 + chr2R_5_8085001 chr2R_8085001 RAL-45 340 chr2R 8157900 8157911 chr2R 8157988 8157999 7 88 2.0 4.0 3.0 1.8 99 chr2R 8157900 5` UTR CR44068 + chr2R 8157950 5` UTR CR44068 + chr2R 8157999 5` UTR CR44068 + chr2R_7_8155001 chr2R_8155001 RAL-45 341 chr2R 8249564 8249846 chr2R 8249646 8249940 10 88 0.5 1.0 0.8 5.6 376 chr2R 8249564 5` UTR CG44439 - chr2R 8249752 intergenic CG44439 - chr2R 8249940 intergenic CG44439 - chr2R_10_8245001 chr2R_8245001 RAL-45 342 chr2R 8266557 8266568 chr2R 8266655 8266658 4 100 5.5 3.0 4.2 0.8 101 chr2R 8266557 exon CG30375 - chr2R 8266608 exon CG30375 - chr2R 8266658 exon CG30375 - chr2R_4_8265001 chr2R_8265001 RAL-45 343 chr2R 8277635 8277669 chr2R 8277730 8277764 21 95 7.5 0.5 4.0 4.2 129 chr2R 8277635 5` UTR CR44280 + chr2R 8277700 5` UTR CR44280 + chr2R 8277764 5` UTR CR44280 + chr2R_21_8275001 chr2R_8275001 RAL-45 344 chr2R 8330862 8330894 chr2R 8331348 8331380 roo 5 486 2.5 2.0 2.2 1.6 518 chr2R 8330862 intron pdm3 + chr2R 8331121 intron pdm3 + chr2R 8331380 intron pdm3 + chr2R_5_8330001 chr2R_8330001 RAL-45 345 chr2R 8398218 8398235 chr2R 8402995 8403016 Doc 5 4778 8.0 4.0 6.0 0.7 4798 chr2R 8398218 intron CG2121 - chr2R 8400617 intron CG2121 - chr2R 8403016 intron CG2121 - chr2R_5_8400001 chr2R_8400001 RAL-45 346 chr2R 8419770 8419780 chr2R 8419883 8419902 5 120 3.5 3.5 3.5 1.1 132 chr2R 8419770 intergenic not near genes chr2R 8419836 intergenic not near genes chr2R 8419902 intergenic not near genes chr2R_5_8415001 chr2R_8415001 RAL-45 347 chr2R 8615779 8615805 chr2R 8615892 8615918 5 113 0.5 2.5 1.5 2.0 139 chr2R 8615779 intron Cirl + chr2R 8615848 intron Cirl + chr2R 8615918 5` UTR Cirl + chr2R_5_8615001 chr2R_8615001 RAL-45 348 chr2R 8658236 8658263 chr2R 8658309 8658335 9 74 2.0 3.0 2.5 2.6 99 chr2R 8658236 intron ptc + chr2R 8658286 intron ptc + chr2R 8658335 intron ptc + chr2R_9_8655001 chr2R_8655001 RAL-45 349 chr2R 8691128 8691144 chr2R 8691596 8691613 7 469 1.5 3.0 2.2 2.2 485 chr2R 8691128 intergenic Jon44E + chr2R 8691370 intergenic Jon44E + chr2R 8691613 exon Jon44E + chr2R_7_8690001 chr2R_8690001 RAL-45 350 chr2R 8722765 8722790 chr2R 8723006 8723031 pogo 10 240 5.0 4.5 4.8 1.7 266 chr2R 8722765 intron CG14767 - chr2R 8722898 intron CG14767 - chr2R 8723031 intron CG14767 - chr2R_10_8720001 chr2R_8720001 RAL-45 351 chr2R 8806325 8806358 chr2R 8806524 8806557 9 197 1.0 4.5 2.8 2.4 232 chr2R 8806325 intron sns + chr2R 8806441 intron sns + chr2R 8806557 intron sns + chr2R_9_8805001 chr2R_8805001 RAL-45 352 chr2R 8846187 8846207 chr2R 8846263 8846280 10 76 3.0 3.0 3.0 2.5 93 chr2R 8846187 intron sns + chr2R 8846234 intron sns + chr2R 8846280 intron sns + chr2R_10_8845001 chr2R_8845001 RAL-45 353 chr2R 9065914 9065946 chr2R 9065996 9066028 10 82 1.5 1.5 1.5 4.0 114 chr2R 9065914 intron ana + chr2R 9065971 intron ana + chr2R 9066028 intron ana + chr2R_10_9065001 chr2R_9065001 RAL-45 354 chr2R 9091820 9091846 chr2R 9091920 9091951 5 104 1.0 0.5 0.8 2.8 131 chr2R 9091820 intron CG8080 - chr2R 9091886 intron CG8080 - chr2R 9091951 intron CG8080 - chr2R_5_9090001 chr2R_9090001 RAL-45 355 chr2R 9151300 9151332 chr2R 9157770 9157802 Burdock 4 6470 1.0 1.0 1.0 2.0 6502 chr2R 9151300 exon CG30345 + chr2R 9154551 intergenic not near genes chr2R 9157802 intergenic CG8008 - chr2R_4_9150001 chr2R_9150001 RAL-45 356 chr2R 9178075 9178106 chr2R 9178157 9178188 10 80 2.0 2.5 2.2 3.1 113 chr2R 9178075 3` UTR ltd - chr2R 9178132 3` UTR ltd - chr2R 9178188 3` UTR ltd - chr2R_10_9175001 chr2R_9175001 RAL-45 357 chr2R 9212692 9212723 chr2R 9213177 9213208 roo 10 485 6.0 2.5 4.2 1.9 516 chr2R 9212692 intergenic CR45309 + chr2R 9212950 intergenic CR45309 + chr2R 9213208 5` UTR CR45309 + chr2R_10_9210001 chr2R_9210001 RAL-45 358 chr2R 9230223 9230241 chr2R 9230303 9230321 6 80 3.5 2.5 3.0 1.5 98 chr2R 9230223 intron hig - chr2R 9230272 intron hig - chr2R 9230321 exon hig - chr2R_6_9230001 chr2R_9230001 RAL-45 359 chr2R 9236520 9236535 chr2R 9237290 9237308 4 772 2.5 2.0 2.2 1.2 788 chr2R 9236520 intron hig - chr2R 9236914 intron hig - chr2R 9237308 intron hig - chr2R_4_9235001 chr2R_9235001 RAL-45 360 chr2R 9300032 9300056 chr2R 9300119 9300143 7 83 2.0 1.0 1.5 2.8 111 chr2R 9300032 3` UTR Drep-2 + chr2R 9300088 3` UTR Drep-2 + chr2R 9300143 3` UTR Drep-2 + chr2R_7_9300001 chr2R_9300001 RAL-45 361 chr2R 9324401 9324425 chr2R 9327397 9327421 8 2996 27.0 32.0 29.5 0.3 3020 chr2R 9324401 intron,intron CG13739 -,CG13954 - chr2R 9325911 intron,intron CG13739 -,CG13954 - chr2R 9327421 intron,intron CG13739 -,CG13954 - chr2R_8_9325001 chr2R_9325001 RAL-45 362 chr2R 9330004 9330024 chr2R 9330090 9330110 10 85 3.0 3.5 3.2 2.4 106 chr2R 9330004 intron,intron CG13739 -,CG13954 - chr2R 9330057 intron,intron CG13739 -,CG13954 - chr2R 9330110 intron,intron CG13739 -,CG13954 - chr2R_10_9330001 chr2R_9330001 RAL-45 363 chr2R 9368130 9368155 chr2R 9368206 9368231 9 76 3.0 0.0 1.5 3.6 101 chr2R 9368130 intron CG13954 - chr2R 9368180 intron CG13954 - chr2R 9368231 intron CG13954 - chr2R_9_9365001 chr2R_9365001 RAL-45 364 chr2R 9510665 9510692 chr2R 9510781 9510808 12 116 4.0 2.0 3.0 3.0 143 chr2R 9510665 intron brp + chr2R 9510736 intron brp + chr2R 9510808 intron brp + chr2R_12_9510001 chr2R_9510001 RAL-45 365 chr2R 9871060 9871073 chr2R 9871537 9871559 roo 4 481 0.5 5.0 2.8 1.1 499 chr2R 9871060 intron cbx - chr2R 9871310 intron cbx - chr2R 9871559 intron,5` UTR cbx -,CG18446 + chr2R_4_9870001 chr2R_9870001 RAL-45 366 chr2R 9945439 9945471 chr2R 9945631 9945666 BS 9 194 2.0 1.5 1.8 3.2 227 chr2R 9945439 intron Mef2 - chr2R 9945552 intron Mef2 - chr2R 9945666 intron Mef2 - chr2R_9_9945001 chr2R_9945001 RAL-45 367 chr2R 10044117 10044152 chr2R 10044371 10044406 11 253 0.5 1.0 0.8 6.1 289 chr2R 10044117 intron,5` UTR oys -,CR44295 + chr2R 10044262 intron,5` UTR oys -,CR44295 + chr2R 10044406 intron,5` UTR oys -,CR44295 + chr2R_11_10040001 chr2R_10040001 RAL-45 368 chr2R 10047818 10047824 chr2R 10047901 10047907 4 83 0.0 1.5 0.8 2.2 89 chr2R 10047818 intron oys - chr2R 10047862 intron oys - chr2R 10047907 intron oys - chr2R_4_10045001 chr2R_10045001 RAL-45 369 chr2R 10132202 10132219 chr2R 10132282 10132299 6 80 1.5 4.5 3.0 1.5 97 chr2R 10132202 intron gem + chr2R 10132250 intron gem + chr2R 10132299 intron gem + chr2R_6_10130001 chr2R_10130001 RAL-45 370 chr2R 10167109 10167141 chr2R 10167184 10167217 10 76 3.5 2.5 3.0 2.5 108 chr2R 10167109 intron KCNQ - chr2R 10167163 intron KCNQ - chr2R 10167217 intron KCNQ - chr2R_10_10165001 chr2R_10165001 RAL-45 371 chr2R 10168355 10168364 chr2R 10168432 10168441 4 77 2.0 0.0 1.0 2.0 86 chr2R 10168355 intron KCNQ - chr2R 10168398 intron KCNQ - chr2R 10168441 intron KCNQ - chr2R_4_10165001 chr2R_10165001 RAL-45 372 chr2R 10176122 10176153 chr2R 10176201 10176232 10 79 2.0 5.0 3.5 2.2 110 chr2R 10176122 intron KCNQ - chr2R 10176177 intron KCNQ - chr2R 10176232 intron KCNQ - chr2R_10_10175001 chr2R_10175001 RAL-45 373 chr2R 10190442 10190454 chr2R 10190525 10190538 7 84 6.0 4.5 5.2 1.1 96 chr2R 10190442 intron KCNQ - chr2R 10190490 intron KCNQ - chr2R 10190538 intron KCNQ - chr2R_7_10190001 chr2R_10190001 RAL-45 374 chr2R 10216206 10216214 chr2R 10216284 10216292 4 78 1.5 2.0 1.8 1.4 86 chr2R 10216206 intron,intron CG12912 -,Hr46 - chr2R 10216249 intron,intron CG12912 -,Hr46 - chr2R 10216292 intron,intron CG12912 -,Hr46 - chr2R_4_10215001 chr2R_10215001 RAL-45 375 chr2R 10270568 10270599 chr2R 10270657 10270688 4 86 2.0 2.0 2.0 1.3 120 chr2R 10270568 intron CAP + chr2R 10270628 intron CAP + chr2R 10270688 intron CAP + chr2R_4_10270001 chr2R_10270001 RAL-45 376 chr2R 10429018 10429048 chr2R 10429095 10429121 5 76 1.5 1.0 1.2 2.3 103 chr2R 10429018 intergenic not near genes chr2R 10429070 intergenic not near genes chr2R 10429121 intergenic not near genes chr2R_5_10425001 chr2R_10425001 RAL-45 377 chr2R 10454114 10454130 chr2R 10454172 10454194 5 71 1.5 2.5 2.0 1.7 80 chr2R 10454114 intron,intron Galphao +,Cyp49a1 - chr2R 10454154 intron,intron Galphao +,Cyp49a1 - chr2R 10454194 intron,intron Galphao +,Cyp49a1 - chr2R_5_10450001 chr2R_10450001 RAL-45 378 chr2R 10457302 10457330 chr2R 10457387 10457415 10 84 3.5 1.5 2.5 2.9 113 chr2R 10457302 intron,intron Galphao +,Cyp49a1 - chr2R 10457358 intron,intron Galphao +,Cyp49a1 - chr2R 10457415 intron,intron Galphao +,Cyp49a1 - chr2R_10_10455001 chr2R_10455001 RAL-45 379 chr2R 10469023 10469056 chr2R 10469149 10469182 10 126 1.5 2.0 1.8 3.6 159 chr2R 10469023 intron CG11777 + chr2R 10469102 intron CG11777 + chr2R 10469182 intron CG11777 + chr2R_10_10465001 chr2R_10465001 RAL-45 380 chr2R 10582116 10582137 chr2R 10582211 10582232 5 95 1.0 0.5 0.8 2.8 116 chr2R 10582116 intron psq + chr2R 10582174 intron psq + chr2R 10582232 intron psq + chr2R_5_10580001 chr2R_10580001 RAL-45 381 chr2R 10621241 10621264 chr2R 10621356 10621356 7 112 2.5 3.0 2.8 1.8 115 chr2R 10621241 intron CG11883 + chr2R 10621298 intron CG11883 + chr2R 10621356 intron CG11883 + chr2R_7_10620001 chr2R_10620001 RAL-45 382 chr2R 10644058 10644078 chr2R 10644136 10644156 4 78 0.5 1.5 1.0 2.0 98 chr2R 10644058 intron Git - chr2R 10644107 intron Git - chr2R 10644156 intron Git - chr2R_4_10640001 chr2R_10640001 RAL-45 383 chr2R 10755157 10755180 chr2R 10755240 10755243 6 81 4.5 4.0 4.2 1.2 86 chr2R 10755157 exon CG33144 - chr2R 10755200 exon CG33144 - chr2R 10755243 exon CG33144 - chr2R_6_10755001 chr2R_10755001 RAL-45 384 chr2R 10827334 10827358 chr2R 10827421 10827446 9 86 4.0 2.0 3.0 2.2 112 chr2R 10827334 exon CG12325 + chr2R 10827390 3` UTR CG12325 + chr2R 10827446 3` UTR,3` UTR CG12325 +,CG12344 - chr2R_9_10825001 chr2R_10825001 RAL-45 385 chr2R 10922782 10922788 chr2R 10922868 10922874 4 86 0.0 2.5 1.2 1.8 92 chr2R 10922782 intergenic not near genes chr2R 10922828 intergenic not near genes chr2R 10922874 intergenic not near genes chr2R_4_10920001 chr2R_10920001 RAL-45 386 chr2R 10948025 10948056 chr2R 10955576 10955607 17.6 13 7549 4.5 3.5 4.0 2.6 7582 chr2R 10948025 intergenic not near genes chr2R 10951816 intergenic not near genes chr2R 10955607 intergenic not near genes chr2R_13_10950001 chr2R_10950001 RAL-45 387 chr2R 11009813 11009831 chr2R 11018986 11019005 roo 4 9174 1.0 2.0 1.5 1.6 9192 chr2R 11009813 intron luna - chr2R 11014409 intron luna - chr2R 11019005 intron luna - chr2R_4_11010001 chr2R_11010001 RAL-45 388 chr2R 11019880 11019909 chr2R 11024946 11024975 jockey 5 5066 5.0 4.0 4.5 0.9 5095 chr2R 11019880 intron luna - chr2R 11022428 intron luna - chr2R 11024975 intron luna - chr2R_5_11020001 chr2R_11020001 RAL-45 389 chr2R 11102864 11102893 chr2R 11102946 11102975 10 82 2.5 0.5 1.5 4.0 111 chr2R 11102864 intron luna - chr2R 11102920 intron luna - chr2R 11102975 intron luna - chr2R_10_11100001 chr2R_11100001 RAL-45 390 chr2R 11119709 11119725 chr2R 11119833 11119856 9 129 3.5 0.0 1.8 3.2 147 chr2R 11119709 3` UTR Cyp12d1-p - chr2R 11119782 3` UTR Cyp12d1-p - chr2R 11119856 3` UTR Cyp12d1-p - chr2R_9_11115001 chr2R_11115001 RAL-45 391 chr2R 11207817 11207837 chr2R 11208009 11208029 BS 5 189 6.0 0.5 3.2 1.2 212 chr2R 11207817 intron shn + chr2R 11207923 intron shn + chr2R 11208029 intron shn + chr2R_5_11205001 chr2R_11205001 RAL-45 392 chr2R 11260517 11260551 chr2R 11260623 11260657 12 106 1.5 1.5 1.5 4.8 140 chr2R 11260517 intergenic not near genes chr2R 11260587 intergenic Cpr47Ed - chr2R 11260657 intergenic Cpr47Ed - chr2R_12_11260001 chr2R_11260001 RAL-45 393 chr2R 11336583 11336608 chr2R 11336666 11336691 6 83 1.0 1.5 1.2 2.7 108 chr2R 11336583 intergenic sha +,lambdaTry + chr2R 11336637 intergenic sha +,lambdaTry + chr2R 11336691 intergenic lambdaTry +,sha + chr2R_6_11335001 chr2R_11335001 RAL-45 394 chr2R 11415530 11415545 chr2R 11418679 11418694 opus 4 3149 2.5 2.0 2.2 1.2 3164 chr2R 11415530 intron Drip - chr2R 11417112 intron Drip - chr2R 11418694 intron Drip - chr2R_4_11415001 chr2R_11415001 RAL-45 395 chr2R 11472648 11472680 chr2R 11473845 11473877 pogo 12 1197 3.0 2.5 2.8 3.2 1229 chr2R 11472648 intergenic not near genes chr2R 11473262 intergenic not near genes chr2R 11473877 intergenic not near genes chr2R_12_11470001 chr2R_11470001 RAL-45 396 chr2R 11494597 11494633 chr2R 11494685 11494721 15 88 2.5 3.0 2.8 3.9 124 chr2R 11494597 intron inv + chr2R 11494659 intron inv + chr2R 11494721 intron inv + chr2R_15_11490001 chr2R_11490001 RAL-45 397 chr2R 11932560 11932592 chr2R 11932677 11932709 6 117 1.5 1.0 1.2 2.7 149 chr2R 11932560 intergenic not near genes chr2R 11932634 intergenic not near genes chr2R 11932709 intergenic not near genes chr2R_6_11930001 chr2R_11930001 RAL-45 398 chr2R 8518780 8518803 chr2R 12066174 12066197 6 3547395 3.0 14.0 8.5 0.6 3547417 chr2R 8518780 intron mtt - chr2R 10292488 intron CAP + chr2R 12066197 intron CG8888 - chr2R_6_10290001 chr2R_10290001 RAL-45 399 chr2R 12187472 12187494 chr2R 12190088 12190124 53 2618 98.5 90.5 94.5 0.6 2652 chr2R 12187472 exon Cyp6g1 + chr2R 12188798 exon Cyp6g2 - chr2R 12190124 exon Cyp6g2 - chr2R_53_12185001 chr2R_12185001 RAL-45 400 chr2R 12217577 12217599 chr2R 12217658 12217680 5 81 1.5 1.5 1.5 2.0 103 chr2R 12217577 intergenic not near genes chr2R 12217628 intergenic not near genes chr2R 12217680 intergenic not near genes chr2R_5_12215001 chr2R_12215001 RAL-45 401 chr2R 12481140 12481168 chr2R 12482938 12482968 roo 8 1800 1.5 6.0 3.8 1.7 1828 chr2R 12481140 exon Dh44-R2 + chr2R 12482054 intron Dh44-R2 + chr2R 12482968 intron Dh44-R2 + chr2R_8_12480001 chr2R_12480001 RAL-45 402 chr2R 12501694 12501710 chr2R 12503854 12503870 Rt1c 4 2161 7.0 3.5 5.2 0.6 2176 chr2R 12501694 intron fdl - chr2R 12502782 intron fdl - chr2R 12503870 intron fdl - chr2R_4_12500001 chr2R_12500001 RAL-45 403 chr2R 12501711 12501725 chr2R 12503848 12503887 Rt1c 6 2150 3.0 2.0 2.5 1.7 2176 chr2R 12501711 intron fdl - chr2R 12502799 intron fdl - chr2R 12503887 intron fdl - chr2R_6_12500001 chr2R_12500001 RAL-45 404 chr2R 12663336 12663375 chr2R 12663416 12663455 19 77 3.0 2.0 2.5 5.4 119 chr2R 12663336 intron nemy - chr2R 12663396 intron nemy - chr2R 12663455 intron nemy - chr2R_19_12660001 chr2R_12660001 RAL-45 405 chr2R 12789301 12789328 chr2R 12797664 12797690 roo 15 8361 1.0 2.5 1.8 5.4 8389 chr2R 12789301 intron,3` UTR sca +,CR45137 - chr2R 12793496 intron,intron sca +,CR45137 - chr2R 12797690 intron,3` UTR sca +,CR45137 - chr2R_15_12790001 chr2R_12790001 RAL-45 406 chr2R 12819453 12819478 chr2R 12824522 12824547 jockey 8 5068 1.5 4.0 2.8 2.1 5094 chr2R 12819453 intergenic not near genes chr2R 12822000 intergenic not near genes chr2R 12824547 intergenic not near genes chr2R_8_12820001 chr2R_12820001 RAL-45 407 chr2R 12834166 12834178 chr2R 12834249 12834261 4 83 2.0 0.5 1.2 1.8 95 chr2R 12834166 intergenic not near genes chr2R 12834214 intergenic not near genes chr2R 12834261 intergenic not near genes chr2R_4_12830001 chr2R_12830001 RAL-45 408 chr2R 13078757 13078781 chr2R 13078854 13078878 9 97 1.5 1.0 1.2 4.1 121 chr2R 13078757 intron Drl-2 - chr2R 13078818 intron Drl-2 - chr2R 13078878 intron Drl-2 - chr2R_9_13075001 chr2R_13075001 RAL-45 409 chr2R 13106407 13106430 chr2R 13106505 13106527 5 97 4.0 7.5 5.8 0.7 120 chr2R 13106407 intergenic not near genes chr2R 13106467 intergenic not near genes chr2R 13106527 intergenic not near genes chr2R_5_13105001 chr2R_13105001 RAL-45 410 chr2R 13136832 13136870 chr2R 13141630 13141668 Doc 17 4798 3.0 2.0 2.5 4.9 4836 chr2R 13136832 exon Cap-G + chr2R 13139250 intron Cap-G + chr2R 13141668 intron Cap-G + chr2R_17_13135001 chr2R_13135001 RAL-45 411 chr2R 13431489 13431504 chr2R 13431568 13431583 4 78 2.5 1.0 1.8 1.4 94 chr2R 13431489 intron CG42321 - chr2R 13431536 intron CG42321 - chr2R 13431583 intron CG42321 - chr2R_4_13430001 chr2R_13430001 RAL-45 412 chr2R 13432934 13432958 chr2R 13433010 13433034 4 76 1.5 0.5 1.0 2.0 100 chr2R 13432934 intron CG42321 - chr2R 13432984 intron CG42321 - chr2R 13433034 intron,5` UTR CG42321 -,CG30065 + chr2R_4_13430001 chr2R_13430001 RAL-45 413 chr2R 13439111 13439140 chr2R 13439226 13439278 5 132 3.0 0.0 1.5 2.0 167 chr2R 13439111 intergenic CG42321 -,cnn - chr2R 13439194 intergenic cnn -,CG42321 - chr2R 13439278 intergenic cnn -,CG42321 - chr2R_5_13435001 chr2R_13435001 RAL-45 414 chr2R 13574401 13574430 chr2R 13574482 13574511 9 81 1.5 0.5 1.0 4.5 110 chr2R 13574401 intergenic CG42808 - chr2R 13574456 intergenic CG42808 -,CR44365 + chr2R 13574511 intergenic CG42808 -,CR44365 + chr2R_9_13570001 chr2R_13570001 RAL-45 415 chr2R 13580504 13580523 chr2R 13580854 13580873 jockey 5 350 1.0 6.5 3.8 1.0 369 chr2R 13580504 3` UTR CG6191 - chr2R 13580688 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580873 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_5_13580001 chr2R_13580001 RAL-45 416 chr2R 13663609 13663635 chr2R 13663687 13663713 7 77 3.0 4.0 3.5 1.6 104 chr2R 13663609 intron fas + chr2R 13663661 intron fas + chr2R 13663713 intron fas + chr2R_7_13660001 chr2R_13660001 RAL-45 417 chr2R 13768983 13768999 chr2R 13769082 13769098 4 99 2.0 4.0 3.0 1.0 115 chr2R 13768983 intergenic not near genes chr2R 13769040 intergenic not near genes chr2R 13769098 intergenic not near genes chr2R_4_13765001 chr2R_13765001 RAL-45 418 chr2R 13905605 13905635 chr2R 13907587 13907595 Rt1a 9 1979 3.5 4.5 4.0 1.8 1990 chr2R 13905605 intron shot - chr2R 13906600 intron shot - chr2R 13907595 intron shot - chr2R_9_13905001 chr2R_13905001 RAL-45 419 chr2R 13925872 13925893 chr2R 13926026 13926047 5 154 3.5 1.5 2.5 1.4 175 chr2R 13925872 intron shot - chr2R 13925960 intron shot - chr2R 13926047 intron shot - chr2R_5_13925001 chr2R_13925001 RAL-45 420 chr2R 14037274 14037298 chr2R 14037357 14037379 4 82 0.0 0.0 0.0 4.0 105 chr2R 14037274 intron mam + chr2R 14037326 intron mam + chr2R 14037379 intron mam + chr2R_4_14035001 chr2R_14035001 RAL-45 421 chr2R 14054578 14054607 chr2R 14054665 14054695 17 88 0.5 5.0 2.8 4.5 117 chr2R 14054578 intron mam + chr2R 14054636 intron mam + chr2R 14054695 intron mam + chr2R_17_14050001 chr2R_14050001 RAL-45 422 chr2R 14130057 14130081 chr2R 14130222 14130247 8 166 1.5 1.5 1.5 3.2 190 chr2R 14130057 intron Prosap - chr2R 14130152 intron Prosap - chr2R 14130247 intron Prosap - chr2R_8_14130001 chr2R_14130001 RAL-45 423 chr2R 14132108 14132115 chr2R 14132198 14132198 4 88 4.5 1.5 3.0 1.0 90 chr2R 14132108 intron Prosap - chr2R 14132153 intron Prosap - chr2R 14132198 intron Prosap - chr2R_4_14130001 chr2R_14130001 RAL-45 424 chr2R 14393866 14393899 chr2R 14393951 14393984 19 83 1.0 3.0 2.0 6.3 118 chr2R 14393866 intergenic not near genes chr2R 14393925 intergenic not near genes chr2R 14393984 intergenic not near genes chr2R_19_14390001 chr2R_14390001 RAL-45 425 chr2R 14467312 14467327 chr2R 14476470 14476485 roo 7 9158 3.5 4.0 3.8 1.5 9173 chr2R 14467312 intergenic not near genes chr2R 14471898 intergenic not near genes chr2R 14476485 5` UTR CR44462 + chr2R_7_14470001 chr2R_14470001 RAL-45 426 chr2R 14565559 14565592 chr2R 14565636 14565665 5 76 0.5 2.0 1.2 2.3 106 chr2R 14565559 intron ttv + chr2R 14565612 intron ttv + chr2R 14565665 intron ttv + chr2R_5_14565001 chr2R_14565001 RAL-45 427 chr2R 14653903 14653925 chr2R 14654003 14654025 6 100 5.0 1.5 3.2 1.4 122 chr2R 14653903 intergenic not near genes chr2R 14653964 intergenic not near genes chr2R 14654025 intergenic not near genes chr2R_6_14650001 chr2R_14650001 RAL-45 428 chr2R 14655167 14655193 chr2R 14655246 14655272 11 78 4.0 1.5 2.8 2.9 105 chr2R 14655167 intergenic not near genes chr2R 14655220 intergenic not near genes chr2R 14655272 intergenic not near genes chr2R_11_14655001 chr2R_14655001 RAL-45 429 chr2R 14850055 14850081 chr2R 14850161 14850185 7 105 25.5 23.0 24.2 0.3 130 chr2R 14850055 exon SMC2 - chr2R 14850120 intron SMC2 - chr2R 14850185 exon SMC2 - chr2R_7_14850001 chr2R_14850001 RAL-45 430 chr2R 14855029 14855063 chr2R 14855121 14855155 14 91 2.5 1.5 2.0 4.7 126 chr2R 14855029 5` UTR Ciao1 - chr2R 14855092 intergenic Ciao1 -,HPS1 + chr2R 14855155 intergenic Ciao1 -,HPS1 + chr2R_14_14855001 chr2R_14855001 RAL-45 431 chr2R 14911710 14911726 chr2R 14911833 14911849 4 123 0.5 2.5 1.5 1.6 139 chr2R 14911710 intron CG10249 - chr2R 14911780 intron CG10249 - chr2R 14911849 intron CG10249 - chr2R_4_14910001 chr2R_14910001 RAL-45 432 chr2R 14968452 14968471 chr2R 14968522 14968539 9 77 2.5 2.5 2.5 2.6 87 chr2R 14968452 intron ckn + chr2R 14968496 intron ckn + chr2R 14968539 intron ckn + chr2R_9_14965001 chr2R_14965001 RAL-45 433 chr2R 15004724 15004751 chr2R 15005053 15005080 jockey 5 329 3.5 1.5 2.5 1.4 356 chr2R 15004724 intergenic not near genes chr2R 15004902 intergenic not near genes chr2R 15005080 intergenic not near genes chr2R_5_15000001 chr2R_15000001 RAL-45 434 chr2R 15015454 15015490 chr2R 15022878 15022914 mdg1 13 7424 2.0 2.0 2.0 4.3 7460 chr2R 15015454 intron hbs + chr2R 15019184 intron hbs + chr2R 15022914 intron hbs + chr2R_13_15015001 chr2R_15015001 RAL-45 435 chr2R 15051083 15051107 chr2R 15051165 15051189 8 82 1.0 2.0 1.5 3.2 106 chr2R 15051083 intergenic not near genes chr2R 15051136 intergenic not near genes chr2R 15051189 intergenic not near genes chr2R_8_15050001 chr2R_15050001 RAL-45 436 chr2R 15117453 15117464 chr2R 15117547 15117557 4 94 2.5 6.0 4.2 0.8 104 chr2R 15117453 intron chn + chr2R 15117505 intron chn + chr2R 15117557 intron chn + chr2R_4_15115001 chr2R_15115001 RAL-45 437 chr2R 15119316 15119340 chr2R 15127797 15127821 Tirant 5 8479 4.5 3.0 3.8 1.0 8505 chr2R 15119316 intron chn + chr2R 15123568 intron chn + chr2R 15127821 intron chn + chr2R_5_15120001 chr2R_15120001 RAL-45 438 chr2R 15137967 15138002 chr2R 15138047 15138084 9 79 2.5 0.0 1.2 4.1 117 chr2R 15137967 intron chn + chr2R 15138026 intron chn + chr2R 15138084 intron chn + chr2R_9_15135001 chr2R_15135001 RAL-45 439 chr2R 15259069 15259085 chr2R 15259153 15259169 4 84 0.0 1.5 0.8 2.2 100 chr2R 15259069 intron ItgalphaPS4 + chr2R 15259119 intron ItgalphaPS4 + chr2R 15259169 intron ItgalphaPS4 + chr2R_4_15255001 chr2R_15255001 RAL-45 440 chr2R 15363663 15363680 chr2R 15363744 15363761 4 80 4.0 4.0 4.0 0.8 98 chr2R 15363663 intron unc-5 + chr2R 15363712 intron unc-5 + chr2R 15363761 intron unc-5 + chr2R_4_15360001 chr2R_15360001 RAL-45 441 chr2R 15652723 15652747 chr2R 15652803 15652828 7 80 3.0 5.0 4.0 1.4 105 chr2R 15652723 intron CG42524 + chr2R 15652776 intron CG42524 + chr2R 15652828 intron CG42524 + chr2R_7_15650001 chr2R_15650001 RAL-45 442 chr2R 15655980 15656010 chr2R 15656060 15656090 5 80 2.5 1.5 2.0 1.7 110 chr2R 15655980 intron CG42524 + chr2R 15656035 intron CG42524 + chr2R 15656090 intron CG42524 + chr2R_5_15655001 chr2R_15655001 RAL-45 443 chr2R 15685363 15685395 chr2R 15685466 15685498 6 103 2.5 1.5 2.0 2.0 135 chr2R 15685363 intron,exon Ranbp11 +,CG30082 - chr2R 15685430 intron,intron Ranbp11 +,CG30082 - chr2R 15685498 intron,intron Ranbp11 +,CG30082 - chr2R_6_15685001 chr2R_15685001 RAL-45 444 chr2R 15755223 15755250 chr2R 15755306 15755333 8 82 3.5 8.5 6.0 1.1 110 chr2R 15755223 intron CG30089 + chr2R 15755278 intron CG30089 + chr2R 15755333 intron CG30089 + chr2R_8_15755001 chr2R_15755001 RAL-45 445 chr2R 15951840 15951866 chr2R 15951916 15951941 6 75 0.5 5.0 2.8 1.6 101 chr2R 15951840 intron Strn-Mlck - chr2R 15951890 intron Strn-Mlck - chr2R 15951941 intron Strn-Mlck - chr2R_6_15950001 chr2R_15950001 RAL-45 446 chr2R 16039217 16039251 chr2R 16039329 16039363 14 110 4.0 4.5 4.2 2.7 146 chr2R 16039217 intron SP2353 + chr2R 16039290 intron SP2353 + chr2R 16039363 intron SP2353 + chr2R_14_16035001 chr2R_16035001 RAL-45 447 chr2R 16245636 16245661 chr2R 16245724 16245749 4 87 1.0 1.5 1.2 1.8 113 chr2R 16245636 intron CngA - chr2R 16245692 intron CngA - chr2R 16245749 intron CngA - chr2R_4_16245001 chr2R_16245001 RAL-45 448 chr2R 16387509 16387543 chr2R 16387990 16388023 14 480 2.0 3.0 2.5 4.0 514 chr2R 16387509 intron Sema-2b + chr2R 16387766 intron Sema-2b + chr2R 16388023 intron Sema-2b + chr2R_14_16385001 chr2R_16385001 RAL-45 449 chr2R 16617060 16617086 chr2R 16617139 16617165 6 79 0.5 2.5 1.5 2.4 105 chr2R 16617060 intron CG5065 + chr2R 16617112 intron CG5065 + chr2R 16617165 intron CG5065 + chr2R_6_16615001 chr2R_16615001 RAL-45 450 chr2R 16688793 16688822 chr2R 16689154 16689183 13 361 3.0 2.5 2.8 3.4 390 chr2R 16688793 intron CG30463 - chr2R 16688988 intron CG30463 - chr2R 16689183 intron CG30463 - chr2R_13_16685001 chr2R_16685001 RAL-45 451 chr2R 16732620 16732654 chr2R 16732707 16732741 9 84 1.0 2.5 1.8 3.2 121 chr2R 16732620 5` UTR CG30463 - chr2R 16732680 5` UTR CG30463 - chr2R 16732741 5` UTR CG30463 - chr2R_9_16730001 chr2R_16730001 RAL-45 452 chr2R 16775294 16775320 chr2R 16778285 16778311 9 2991 44.5 13.5 29.0 0.3 3017 chr2R 16775294 exon Arp53D + chr2R 16776802 intergenic not near genes chr2R 16778311 intergenic Vkor + chr2R_9_16775001 chr2R_16775001 RAL-45 453 chr2R 16972441 16972453 chr2R 16972538 16972550 5 96 0.5 2.5 1.5 2.0 109 chr2R 16972441 intergenic not near genes chr2R 16972496 intergenic not near genes chr2R 16972550 intergenic not near genes chr2R_5_16970001 chr2R_16970001 RAL-45 454 chr2R 17015003 17015018 chr2R 17015089 17015105 5 85 7.0 4.5 5.8 0.7 102 chr2R 17015003 exon Ehbp1 - chr2R 17015054 5` UTR Ehbp1 - chr2R 17015105 5` UTR Ehbp1 - chr2R_5_17015001 chr2R_17015001 RAL-45 455 chr2R 17176362 17176387 chr2R 17182552 17182577 diver 6 6190 0.5 2.0 1.2 2.7 6215 chr2R 17176362 intergenic not near genes chr2R 17179470 intergenic not near genes chr2R 17182577 intergenic not near genes chr2R_6_17175001 chr2R_17175001 RAL-45 456 chr2R 17225294 17225303 chr2R 17225373 17225382 5 79 7.5 6.0 6.8 0.6 88 chr2R 17225294 intron mbl + chr2R 17225338 intron mbl + chr2R 17225382 intron mbl + chr2R_5_17225001 chr2R_17225001 RAL-45 457 chr2R 17381586 17381616 chr2R 17381674 17381702 6 87 2.5 1.0 1.8 2.1 116 chr2R 17381586 intergenic not near genes chr2R 17381644 intergenic not near genes chr2R 17381702 intergenic not near genes chr2R_6_17380001 chr2R_17380001 RAL-45 458 chr2R 17500679 17500690 chr2R 17500755 17500766 4 76 0.0 0.0 0.0 4.0 87 chr2R 17500679 intergenic not near genes chr2R 17500722 intergenic not near genes chr2R 17500766 intergenic not near genes chr2R_4_17500001 chr2R_17500001 RAL-45 459 chr2R 17655202 17655232 chr2R 17655279 17655309 8 70 2.0 6.5 4.2 1.5 107 chr2R 17655202 intron CCHa1-R - chr2R 17655256 intron CCHa1-R - chr2R 17655309 intron CCHa1-R - chr2R_8_17655001 chr2R_17655001 RAL-45 460 chr2R 17784033 17784054 chr2R 17784274 17784295 pogo 9 241 4.0 9.0 6.5 1.2 262 chr2R 17784033 intergenic mir-31a - chr2R 17784164 intergenic mir-31a - chr2R 17784295 intergenic mir-31a - chr2R_9_17780001 chr2R_17780001 RAL-45 461 chr2R 17835040 17835058 chr2R 17835130 17835152 8 93 4.0 4.0 4.0 1.6 112 chr2R 17835040 intron grh + chr2R 17835096 intron grh + chr2R 17835152 intron grh + chr2R_8_17835001 chr2R_17835001 RAL-45 462 chr2R 17846776 17846810 chr2R 17846860 17846894 13 84 4.0 2.0 3.0 3.2 118 chr2R 17846776 intron,5` UTR olf186-F +,olf186-M + chr2R 17846835 intron,5` UTR olf186-F +,olf186-M + chr2R 17846894 intron,5` UTR olf186-F +,olf186-M + chr2R_13_17845001 chr2R_17845001 RAL-45 463 chr2R 17934131 17934159 chr2R 17934235 17934264 11 105 2.5 2.0 2.2 3.4 133 chr2R 17934131 intergenic not near genes chr2R 17934198 intergenic not near genes chr2R 17934264 intergenic not near genes chr2R_11_17930001 chr2R_17930001 RAL-45 464 chr2R 17971328 17971356 chr2R 17972060 17972087 7 731 1.5 0.5 1.0 3.5 759 chr2R 17971328 intergenic not near genes chr2R 17971708 intergenic not near genes chr2R 17972087 intergenic not near genes chr2R_7_17970001 chr2R_17970001 RAL-45 465 chr2R 17982923 17982953 chr2R 17983008 17983038 5 85 1.0 3.0 2.0 1.7 115 chr2R 17982923 intron dpr13 - chr2R 17982980 intron dpr13 - chr2R 17983038 intron dpr13 - chr2R_5_17980001 chr2R_17980001 RAL-45 466 chr2R 18289442 18289462 chr2R 18289544 18289564 5 101 0.0 6.0 3.0 1.2 122 chr2R 18289442 intron,intron sbb -,CG14502 + chr2R 18289503 intron,intron sbb -,CG14502 + chr2R 18289564 exon,intron sbb -,CG14502 + chr2R_5_18285001 chr2R_18285001 RAL-45 467 chr2R 18308282 18308314 chr2R 18308388 18308419 10 106 5.5 1.5 3.5 2.2 137 chr2R 18308282 intron sbb - chr2R 18308350 intron sbb - chr2R 18308419 intron sbb - chr2R_10_18305001 chr2R_18305001 RAL-45 468 chr2R 18358395 18358420 chr2R 18372607 18372632 roo 4 14212 1.5 0.5 1.0 2.0 14237 chr2R 18358395 intergenic not near genes chr2R 18365514 intergenic not near genes chr2R 18372632 intergenic not near genes chr2R_4_18365001 chr2R_18365001 RAL-45 469 chr2R 18376736 18376756 chr2R 18376826 18376846 6 90 0.5 2.0 1.2 2.7 110 chr2R 18376736 intergenic not near genes chr2R 18376791 intergenic not near genes chr2R 18376846 intergenic not near genes chr2R_6_18375001 chr2R_18375001 RAL-45 470 chr2R 18407234 18407260 chr2R 18407319 18407344 10 84 2.5 6.0 4.2 1.9 110 chr2R 18407234 exon GstE7 + chr2R 18407289 exon GstE7 + chr2R 18407344 exon GstE7 + chr2R_10_18405001 chr2R_18405001 RAL-45 471 chr2R 18408285 18408313 chr2R 18408406 18408430 16 121 2.5 3.0 2.8 4.2 145 chr2R 18408285 exon GstE8 + chr2R 18408358 exon GstE8 + chr2R 18408430 exon GstE8 + chr2R_16_18405001 chr2R_18405001 RAL-45 472 chr2R 18473256 18473287 chr2R 18473340 18473369 11 83 4.0 1.5 2.8 2.9 113 chr2R 18473256 intron CG30116 - chr2R 18473312 intron CG30116 - chr2R 18473369 intron CG30116 - chr2R_11_18470001 chr2R_18470001 RAL-45 473 chr2R 18526601 18526622 chr2R 18526683 18526704 10 81 2.5 1.5 2.0 3.3 103 chr2R 18526601 intergenic CG43066 + chr2R 18526652 intergenic CG43066 + chr2R 18526704 intergenic CG43066 + chr2R_10_18525001 chr2R_18525001 RAL-45 474 chr2R 18575805 18575829 chr2R 18581991 18582017 3S18 7 6187 3.0 1.5 2.2 2.2 6212 chr2R 18575805 intron GEFmeso - chr2R 18578911 intron GEFmeso - chr2R 18582017 intron GEFmeso - chr2R_7_18575001 chr2R_18575001 RAL-45 475 chr2R 18590866 18590901 chr2R 18600018 18600053 roo 12 9152 1.5 3.5 2.5 3.4 9187 chr2R 18590866 intron GEFmeso - chr2R 18595460 intron GEFmeso - chr2R 18600053 intron GEFmeso - chr2R_12_18595001 chr2R_18595001 RAL-45 476 chr2R 18645816 18645826 chr2R 18646158 18646169 5 343 0.5 0.5 0.5 3.3 353 chr2R 18645816 intron SP2637 - chr2R 18645992 intron SP2637 - chr2R 18646169 intron SP2637 - chr2R_5_18645001 chr2R_18645001 RAL-45 477 chr2R 18692908 18692914 chr2R 18692995 18692995 4 85 5.5 0.5 3.0 1.0 87 chr2R 18692908 intron Sik3 + chr2R 18692952 intron Sik3 + chr2R 18692995 intron Sik3 + chr2R_4_18690001 chr2R_18690001 RAL-45 478 chr2R 18785914 18785949 chr2R 18785993 18786028 13 79 3.5 1.5 2.5 3.7 114 chr2R 18785914 intron CG15080 + chr2R 18785971 intron CG15080 + chr2R 18786028 intron CG15080 + chr2R_13_18785001 chr2R_18785001 RAL-45 479 chr2R 18862314 18862406 chr2R 18862401 18862477 4 83 0.0 0.0 0.0 4.0 163 chr2R 18862314 intergenic Jheh3 - chr2R 18862396 intergenic Jheh3 -,CG43069 + chr2R 18862477 intergenic CG43069 +,Jheh3 - chr2R_4_18860001 chr2R_18860001 RAL-45 480 chr2R 18926506 18926529 chr2R 18926593 18926616 7 87 1.5 1.5 1.5 2.8 110 chr2R 18926506 intron sano + chr2R 18926561 intron sano + chr2R 18926616 intron sano + chr2R_7_18925001 chr2R_18925001 RAL-45 481 chr2R 18953158 18953190 chr2R 18953245 18953277 7 87 0.0 2.0 1.0 3.5 119 chr2R 18953158 intron sano + chr2R 18953218 intron sano + chr2R 18953277 intron sano + chr2R_7_18950001 chr2R_18950001 RAL-45 482 chr2R 19012936 19012970 chr2R 19013030 19013064 9 94 2.5 2.5 2.5 2.6 128 chr2R 19012936 intergenic not near genes chr2R 19013000 intergenic not near genes chr2R 19013064 intergenic not near genes chr2R_9_19010001 chr2R_19010001 RAL-45 483 chr2R 19185641 19185671 chr2R 19185851 19185881 8 205 0.5 5.0 2.8 2.1 240 chr2R 19185641 intron hppy + chr2R 19185761 intron hppy + chr2R 19185881 intron hppy + chr2R_8_19185001 chr2R_19185001 RAL-45 484 chr2R 19209793 19209821 chr2R 19209871 19209897 6 76 5.5 4.5 5.0 1.0 104 chr2R 19209793 intron hppy + chr2R 19209845 intron hppy + chr2R 19209897 intron hppy + chr2R_6_19205001 chr2R_19205001 RAL-45 485 chr2R 19254633 19254669 chr2R 19254759 19254795 4 126 1.0 1.5 1.2 1.8 162 chr2R 19254633 intergenic not near genes chr2R 19254714 intergenic not near genes chr2R 19254795 intergenic not near genes chr2R_4_19250001 chr2R_19250001 RAL-45 486 chr2R 19300963 19300992 chr2R 19301046 19301074 12 83 0.5 1.5 1.0 6.0 111 chr2R 19300963 intron Tab2 + chr2R 19301018 intron Tab2 + chr2R 19301074 intron Tab2 + chr2R_12_19300001 chr2R_19300001 RAL-45 487 chr2R 19384019 19384048 chr2R 19384126 19384156 11 108 3.0 3.0 3.0 2.8 137 chr2R 19384019 exon CG10073 + chr2R 19384088 exon CG10073 + chr2R 19384156 intron CG10073 + chr2R_11_19380001 chr2R_19380001 RAL-45 488 chr2R 19528581 19528593 chr2R 19528661 19528672 4 79 0.5 2.5 1.5 1.6 91 chr2R 19528581 3` UTR sm - chr2R 19528626 3` UTR sm - chr2R 19528672 3` UTR sm - chr2R_4_19525001 chr2R_19525001 RAL-45 489 chr2R 19557243 19557260 chr2R 19557551 19557568 10 308 2.0 4.0 3.0 2.5 325 chr2R 19557243 intron sm - chr2R 19557406 intron sm - chr2R 19557568 intron sm - chr2R_10_19555001 chr2R_19555001 RAL-45 490 chr2R 19781338 19781365 chr2R 19781412 19781444 8 77 1.5 4.0 2.8 2.1 106 chr2R 19781338 intergenic not near genes chr2R 19781391 intergenic not near genes chr2R 19781444 intergenic not near genes chr2R_8_19780001 chr2R_19780001 RAL-45 491 chr2R 19816091 19816109 chr2R 19816204 19816222 8 113 0.0 0.0 0.0 8.0 131 chr2R 19816091 3` UTR Obp56h + chr2R 19816156 3` UTR Obp56h + chr2R 19816222 intergenic Obp56h + chr2R_8_19815001 chr2R_19815001 RAL-45 492 chr2R 19922609 19922629 chr2R 19922686 19922706 8 76 1.0 4.0 2.5 2.3 97 chr2R 19922609 intergenic not near genes chr2R 19922658 intergenic not near genes chr2R 19922706 intergenic not near genes chr2R_8_19920001 chr2R_19920001 RAL-45 493 chr2R 19957429 19957454 chr2R 19962631 19962656 copia 7 5200 5.0 0.5 2.8 1.8 5227 chr2R 19957429 intergenic CG44623 + chr2R 19960042 intergenic not near genes chr2R 19962656 intergenic not near genes chr2R_7_19960001 chr2R_19960001 RAL-45 494 chr2R 20010238 20010258 chr2R 20010315 20010335 4 77 0.5 2.5 1.5 1.6 97 chr2R 20010238 intergenic not near genes chr2R 20010286 intergenic not near genes chr2R 20010335 intergenic not near genes chr2R_4_20010001 chr2R_20010001 RAL-45 495 chr2R 20031908 20031940 chr2R 20032004 20032036 7 96 1.5 1.5 1.5 2.8 128 chr2R 20031908 intergenic not near genes chr2R 20031972 intergenic not near genes chr2R 20032036 intergenic not near genes chr2R_7_20030001 chr2R_20030001 RAL-45 496 chr2R 20326759 20326793 chr2R 20326836 20326870 7 76 1.0 1.0 1.0 3.5 111 chr2R 20326759 5` UTR MED8 - chr2R 20326814 intergenic MED8 -,CG8929 + chr2R 20326870 intergenic MED8 -,CG8929 + chr2R_7_20325001 chr2R_20325001 RAL-45 497 chr2R 20430703 20430734 chr2R 20430791 20430822 9 88 2.0 4.0 3.0 2.2 119 chr2R 20430703 intron CG12484 + chr2R 20430762 intron CG12484 + chr2R 20430822 intron CG12484 + chr2R_9_20430001 chr2R_20430001 RAL-45 498 chr2R 20571298 20571300 chr2R 20571397 20571399 4 98 6.0 0.0 3.0 1.0 101 chr2R 20571298 intron qsm - chr2R 20571348 intron qsm - chr2R 20571399 intron qsm - chr2R_4_20570001 chr2R_20570001 RAL-45 499 chr2R 20601718 20601750 chr2R 20601803 20601835 4 85 0.5 0.0 0.2 3.3 117 chr2R 20601718 intron bl + chr2R 20601776 intron bl + chr2R 20601835 intron bl + chr2R_4_20600001 chr2R_20600001 RAL-45 500 chr2R 20739444 20739478 chr2R 20744212 20744246 F-element 9 4766 4.0 3.5 3.8 1.9 4802 chr2R 20739444 intron dpr + chr2R 20741845 intron dpr + chr2R 20744246 intron dpr + chr2R_9_20740001 chr2R_20740001 RAL-45 501 chr2R 20863124 20863139 chr2R 20863210 20863225 11 85 1.5 4.5 3.0 2.8 101 chr2R 20863124 intergenic not near genes chr2R 20863174 intergenic not near genes chr2R 20863225 intergenic not near genes chr2R_11_20860001 chr2R_20860001 RAL-45 502 chr2R 21103543 21103552 chr2R 21103623 21103632 5 79 2.0 0.0 1.0 2.5 89 chr2R 21103543 intron ktub + chr2R 21103588 intron ktub + chr2R 21103632 intron ktub + chr2R_5_21100001 chr2R_21100001 RAL-45 503 chr2R 21113482 21113485 chr2R 21113571 21113574 4 89 1.0 1.0 1.0 2.0 92 chr2R 21113482 intron ktub + chr2R 21113528 intron ktub + chr2R 21113574 intron ktub + chr2R_4_21110001 chr2R_21110001 RAL-45 504 chr2R 21136898 21136915 chr2R 21136982 21136999 4 84 1.5 1.0 1.2 1.8 101 chr2R 21136898 intron Magi - chr2R 21136948 intron Magi - chr2R 21136999 intron Magi - chr2R_4_21135001 chr2R_21135001 RAL-45 505 chr2R 21151130 21151136 chr2R 21153763 21153769 opus 4 2633 0.0 1.0 0.5 2.7 2639 chr2R 21151130 intron CG30389 - chr2R 21152450 intron CG30389 - chr2R 21153769 intron CG30389 - chr2R_4_21150001 chr2R_21150001 RAL-45 506 chr2R 21188229 21188250 chr2R 21188299 21188331 11 77 0.0 3.0 1.5 4.4 102 chr2R 21188229 exon tud + chr2R 21188280 intron tud + chr2R 21188331 intron tud + chr2R_11_21185001 chr2R_21185001 RAL-45 507 chr2R 21415284 21415319 chr2R 21415374 21415408 21 89 4.0 1.5 2.8 5.5 124 chr2R 21415284 intron Sdc - chr2R 21415346 intron Sdc - chr2R 21415408 intron Sdc - chr2R_21_21415001 chr2R_21415001 RAL-45 508 chr2R 21449251 21449279 chr2R 21449331 21449359 4 80 1.0 1.5 1.2 1.8 108 chr2R 21449251 intron Sdc - chr2R 21449305 intron Sdc - chr2R 21449359 intron Sdc - chr2R_4_21445001 chr2R_21445001 RAL-45 509 chr2R 21469956 21469969 chr2R 21470039 21470056 5 86 0.0 3.0 1.5 2.0 100 chr2R 21469956 intron Sdc - chr2R 21470006 intron Sdc - chr2R 21470056 intron Sdc - chr2R_5_21470001 chr2R_21470001 RAL-45 510 chr2R 21592848 21592858 chr2R 21592931 21592940 5 83 6.5 7.5 7.0 0.6 92 chr2R 21592848 intergenic not near genes chr2R 21592894 intergenic not near genes chr2R 21592940 intergenic not near genes chr2R_5_21590001 chr2R_21590001 RAL-45 511 chr2R 21738275 21738305 chr2R 21747435 21747458 roo 8 9158 2.0 5.5 3.8 1.7 9183 chr2R 21738275 intergenic not near genes chr2R 21742866 intergenic not near genes chr2R 21747458 intergenic not near genes chr2R_8_21740001 chr2R_21740001 RAL-45 512 chr2R 21886130 21886167 chr2R 21886209 21886244 8 76 2.0 0.0 1.0 4.0 114 chr2R 21886130 intron Fili + chr2R 21886187 intron Fili + chr2R 21886244 intron Fili + chr2R_8_21885001 chr2R_21885001 RAL-45 513 chr2R 21985544 21985556 chr2R 21985625 21985637 4 81 3.0 3.5 3.2 1.0 93 chr2R 21985544 intergenic CG30401 - chr2R 21985590 intergenic CG30401 - chr2R 21985637 3` UTR CG30401 - chr2R_4_21985001 chr2R_21985001 RAL-45 514 chr2R 22003089 22003110 chr2R 22003175 22003196 7 85 5.0 0.5 2.8 1.8 107 chr2R 22003089 intron CG34370 - chr2R 22003142 intron CG34370 - chr2R 22003196 intron CG34370 - chr2R_7_22000001 chr2R_22000001 RAL-45 515 chr2R 22072685 22072715 chr2R 22072770 22072800 8 85 1.5 5.0 3.2 1.9 115 chr2R 22072685 intron CG11474 - chr2R 22072742 intron CG11474 - chr2R 22072800 exon CG11474 - chr2R_8_22070001 chr2R_22070001 RAL-45 516 chr2R 22102115 22102159 chr2R 22102203 22102237 8 87 0.0 2.5 1.2 3.6 122 chr2R 22102115 intergenic not near genes chr2R 22102176 intergenic not near genes chr2R 22102237 intergenic not near genes chr2R_8_22100001 chr2R_22100001 RAL-45 517 chr2R 22115252 22115266 chr2R 22115555 22115569 5 302 1.0 2.5 1.8 1.8 317 chr2R 22115252 intron,intron Vrp1 -,CG30281 + chr2R 22115410 intron,exon Vrp1 -,CG30281 + chr2R 22115569 intron,exon Vrp1 -,CG30281 + chr2R_5_22115001 chr2R_22115001 RAL-45 518 chr2R 22222396 22222426 chr2R 22222484 22222517 13 88 4.0 2.5 3.2 3.1 121 chr2R 22222396 exon Oatp58Db - chr2R 22222456 exon Oatp58Db - chr2R 22222517 exon Oatp58Db - chr2R_13_22220001 chr2R_22220001 RAL-45 519 chr2R 22272092 22272102 chr2R 22272194 22272204 4 102 3.0 4.5 3.8 0.8 112 chr2R 22272092 intron dve + chr2R 22272148 intron dve + chr2R 22272204 intron dve + chr2R_4_22270001 chr2R_22270001 RAL-45 520 chr2R 22349692 22349710 chr2R 22351476 22351494 jockey 4 1783 3.5 3.5 3.5 0.9 1802 chr2R 22349692 intron Liprin-gamma - chr2R 22350593 intron Liprin-gamma - chr2R 22351494 intron Liprin-gamma - chr2R_4_22350001 chr2R_22350001 RAL-45 521 chr2R 22360386 22360396 chr2R 22360819 22360829 jockey 4 433 5.5 3.5 4.5 0.7 443 chr2R 22360386 intron Liprin-gamma - chr2R 22360608 intron Liprin-gamma - chr2R 22360829 intron Liprin-gamma - chr2R_4_22360001 chr2R_22360001 RAL-45 522 chr2R 22411489 22411529 chr2R 22411567 22411582 7 74 1.5 0.0 0.8 3.9 93 chr2R 22411489 5` UTR qkr58E-3 - chr2R 22411536 5` UTR qkr58E-3 - chr2R 22411582 intergenic qkr58E-3 -,Mes4 + chr2R_7_22410001 chr2R_22410001 RAL-45 523 chr2R 22499854 22499887 chr2R 22499930 22499963 9 76 1.0 4.5 2.8 2.4 109 chr2R 22499854 intron px - chr2R 22499908 intron px - chr2R 22499963 intron px - chr2R_9_22495001 chr2R_22495001 RAL-45 524 chr2R 22507423 22507447 chr2R 22507504 22507513 16 79 4.5 8.5 6.5 2.1 90 chr2R 22507423 intron px - chr2R 22507468 intron px - chr2R 22507513 intron px - chr2R_16_22505001 chr2R_22505001 RAL-45 525 chr2R 22525747 22525778 chr2R 22529302 22529333 jockey 13 3555 3.0 3.0 3.0 3.2 3586 chr2R 22525747 intron px - chr2R 22527540 intron px - chr2R 22529333 intron px - chr2R_13_22525001 chr2R_22525001 RAL-45 526 chr2R 22540941 22540961 chr2R 22541020 22541040 5 79 3.5 3.5 3.5 1.1 99 chr2R 22540941 exon px - chr2R 22540990 intron px - chr2R 22541040 intron px - chr2R_5_22540001 chr2R_22540001 RAL-45 527 chr2R 22679752 22679771 chr2R 22679829 22679845 11 76 9.0 2.5 5.8 1.6 93 chr2R 22679752 intergenic not near genes chr2R 22679798 intergenic not near genes chr2R 22679845 intergenic not near genes chr2R_11_22675001 chr2R_22675001 RAL-45 528 chr2R 22679773 22679785 chr2R 22679826 22679857 6 61 6.0 2.5 4.2 1.2 84 chr2R 22679773 intergenic not near genes chr2R 22679815 intergenic not near genes chr2R 22679857 intergenic not near genes chr2R_6_22675001 chr2R_22675001 RAL-45 529 chr2R 22774967 22774995 chr2R 22775386 22775414 jockey 11 419 3.5 1.0 2.2 3.4 447 chr2R 22774967 intron CG42260 - chr2R 22775190 intron CG42260 - chr2R 22775414 intron CG42260 - chr2R_11_22775001 chr2R_22775001 RAL-45 530 chr2R 22868262 22868285 chr2R 22868367 22868396 13 109 3.0 4.0 3.5 2.9 134 chr2R 22868262 5` UTR fd59A + chr2R 22868329 5` UTR fd59A + chr2R 22868396 5` UTR fd59A + chr2R_13_22865001 chr2R_22865001 RAL-45 531 chr2R 22907401 22907436 chr2R 22907494 22907529 19 87 4.5 3.0 3.8 4.0 128 chr2R 22907401 intron nahoda + chr2R 22907465 intron nahoda + chr2R 22907529 intron nahoda + chr2R_19_22905001 chr2R_22905001 RAL-45 532 chr2R 22971497 22971529 chr2R 22971575 22971608 13 79 3.5 0.5 2.0 4.3 111 chr2R 22971497 intergenic not near genes chr2R 22971552 intergenic not near genes chr2R 22971608 intergenic not near genes chr2R_13_22970001 chr2R_22970001 RAL-45 533 chr2R 22991629 22991650 chr2R 22991721 22991742 4 92 4.5 1.0 2.8 1.1 113 chr2R 22991629 intron twi + chr2R 22991686 intron twi + chr2R 22991742 intron twi + chr2R_4_22990001 chr2R_22990001 RAL-45 534 chr2R 23052662 23052689 chr2R 23052738 23052765 4 76 1.0 4.0 2.5 1.1 103 chr2R 23052662 intergenic not near genes chr2R 23052714 intergenic not near genes chr2R 23052765 intergenic not near genes chr2R_4_23050001 chr2R_23050001 RAL-45 535 chr2R 23356274 23356310 chr2R 23356362 23356392 8 88 0.5 1.5 1.0 4.0 118 chr2R 23356274 3` UTR Rpi + chr2R 23356333 3` UTR Rpi + chr2R 23356392 3` UTR,3` UTR Rpi +,CG3500 - chr2R_8_23355001 chr2R_23355001 RAL-45 536 chr2R 23402616 23402639 chr2R 23407692 23407715 flea 7 5074 1.5 0.5 1.0 3.5 5099 chr2R 23402616 intergenic CG3520 - chr2R 23405166 intergenic not near genes chr2R 23407715 intergenic not near genes chr2R_7_23405001 chr2R_23405001 RAL-45 537 chr2R 23429212 23429239 chr2R 23429437 23429463 9 225 1.0 1.5 1.2 4.1 251 chr2R 23429212 intron CG9815 - chr2R 23429338 intron CG9815 - chr2R 23429463 intron CG9815 - chr2R_9_23425001 chr2R_23425001 RAL-45 538 chr2R 23482679 23482682 chr2R 23482983 23482986 4 304 1.5 3.0 2.2 1.2 307 chr2R 23482679 intron CG43795 + chr2R 23482832 intron CG43795 + chr2R 23482986 intron CG43795 + chr2R_4_23480001 chr2R_23480001 RAL-45 539 chr2R 23529582 23529604 chr2R 23537148 23537176 412 7 7569 4.0 5.0 4.5 1.3 7594 chr2R 23529582 intron bw - chr2R 23533379 intron bw - chr2R 23537176 exon bw - chr2R_7_23530001 chr2R_23530001 RAL-45 540 chr2R 23589179 23589191 chr2R 23589256 23589268 5 77 3.5 2.0 2.8 1.3 89 chr2R 23589179 intron apt + chr2R 23589224 intron apt + chr2R 23589268 intron apt + chr2R_5_23585001 chr2R_23585001 RAL-45 541 chr2R 23607036 23607060 chr2R 23607117 23607141 7 81 2.0 2.5 2.2 2.2 105 chr2R 23607036 intron CG17664 - chr2R 23607088 intron CG17664 - chr2R 23607141 intron CG17664 - chr2R_7_23605001 chr2R_23605001 RAL-45 542 chr2R 23653973 23654001 chr2R 23654049 23654078 11 76 4.0 0.5 2.2 3.4 105 chr2R 23653973 3` UTR retn + chr2R 23654026 3` UTR retn + chr2R 23654078 3` UTR retn + chr2R_11_23650001 chr2R_23650001 RAL-45 543 chr2R 23671431 23671435 chr2R 23671526 23671530 5 95 0.5 2.0 1.2 2.3 99 chr2R 23671431 intron Pde8 + chr2R 23671480 intron Pde8 + chr2R 23671530 intron Pde8 + chr2R_5_23670001 chr2R_23670001 RAL-45 544 chr2R 23758326 23758357 chr2R 23758401 23758433 10 74 4.5 3.5 4.0 2.0 107 chr2R 23758326 intron CG9850 - chr2R 23758380 intron CG9850 - chr2R 23758433 intron CG9850 - chr2R_10_23755001 chr2R_23755001 RAL-45 545 chr2R 23817625 23817640 chr2R 23817804 23817820 5 178 5.0 4.5 4.8 0.9 195 chr2R 23817625 intron CG4797 - chr2R 23817722 intron CG4797 - chr2R 23817820 intron CG4797 - chr2R_5_23815001 chr2R_23815001 RAL-45 546 chr2R 23986512 23986540 chr2R 23986592 23986620 11 80 1.0 1.0 1.0 5.5 108 chr2R 23986512 intron Phm - chr2R 23986566 intron Phm - chr2R 23986620 intron,5` UTR Phm -,CG30178 + chr2R_11_23985001 chr2R_23985001 RAL-45 547 chr2R 24031380 24031410 chr2R 24031464 24031494 12 83 1.0 2.0 1.5 4.8 114 chr2R 24031380 5` UTR CG30172 - chr2R 24031437 intergenic CG30172 -,Chi - chr2R 24031494 intergenic Chi -,CG30172 - chr2R_12_24030001 chr2R_24030001 RAL-45 548 chr2R 24147070 24147096 chr2R 24154647 24154674 412 9 7574 2.0 4.0 3.0 2.2 7604 chr2R 24147070 intron Dat + chr2R 24150872 intron Dat + chr2R 24154674 intron Dat + chr2R_9_24150001 chr2R_24150001 RAL-45 549 chr2R 24204559 24204592 chr2R 24204641 24204674 6 82 2.0 2.5 2.2 1.9 115 chr2R 24204559 intron CG11406 - chr2R 24204616 intron CG11406 - chr2R 24204674 intron CG11406 - chr2R_6_24200001 chr2R_24200001 RAL-45 550 chr2R 24303522 24303537 chr2R 24303601 24303608 4 77 5.0 3.5 4.2 0.8 86 chr2R 24303522 intergenic not near genes chr2R 24303565 intergenic not near genes chr2R 24303608 intergenic not near genes chr2R_4_24300001 chr2R_24300001 RAL-45 551 chr2R 24353440 24353458 chr2R 24361802 24361819 roo 6 8362 2.0 6.5 4.2 1.2 8379 chr2R 24353440 intron,intron bs +,CR44811 - chr2R 24357630 intron,intron bs +,CR44811 - chr2R 24361819 intron,intron bs +,CR44811 - chr2R_6_24355001 chr2R_24355001 RAL-45 552 chr2R 24362022 24362054 chr2R 24362101 24362133 12 79 5.5 3.0 4.2 2.3 111 chr2R 24362022 intron,intron bs +,CR44811 - chr2R 24362078 intron,intron bs +,CR44811 - chr2R 24362133 intron,intron bs +,CR44811 - chr2R_12_24360001 chr2R_24360001 RAL-45 553 chr2R 24430810 24430819 chr2R 24430891 24430900 4 81 1.0 2.0 1.5 1.6 90 chr2R 24430810 intergenic CG15873 - chr2R 24430855 intergenic CG15873 -,Pgam5-2 - chr2R 24430900 intergenic CG15873 -,Pgam5-2 - chr2R_4_24430001 chr2R_24430001 RAL-45 554 chr2R 24490889 24490916 chr2R 24492637 24492662 10 1750 19.0 23.5 21.2 0.5 1773 chr2R 24490889 intergenic CG13579 + chr2R 24491776 intergenic CG13589 - chr2R 24492662 exon CG13589 - chr2R_10_24490001 chr2R_24490001 RAL-45 555 chr2R 24590110 24590140 chr2R 24590202 24590230 11 91 5.0 3.0 4.0 2.2 120 chr2R 24590110 intron pio + chr2R 24590170 intron pio + chr2R 24590230 intron pio + chr2R_11_24590001 chr2R_24590001 RAL-45 556 chr2R 24629081 24629114 chr2R 24629285 24629311 11 202 4.5 2.0 3.2 2.6 230 chr2R 24629081 intron CG13594 - chr2R 24629196 intron CG13594 - chr2R 24629311 intron CG13594 - chr2R_11_24625001 chr2R_24625001 RAL-45 557 chr2R 24713989 24714021 chr2R 24714250 24714281 5 261 3.0 2.0 2.5 1.4 292 chr2R 24713989 intron Mid1 - chr2R 24714135 intron Mid1 - chr2R 24714281 intron Mid1 - chr2R_5_24710001 chr2R_24710001 RAL-45 558 chr2R 24727886 24727916 chr2R 24735392 24735404 mdg1 11 7506 4.0 3.5 3.8 2.3 7518 chr2R 24727886 intron Mid1 - chr2R 24731645 intron Mid1 - chr2R 24735404 intron Mid1 - chr2R_11_24730001 chr2R_24730001 RAL-45 559 chr2R 24763615 24763641 chr2R 24765585 24765616 G2 14 1973 2.0 4.5 3.2 3.3 2001 chr2R 24763615 exon CG3894 + chr2R 24764616 intron CG3894 + chr2R 24765616 exon CG3894 + chr2R_14_24760001 chr2R_24760001 RAL-45 560 chr2R 25101282 25101301 chr2R 25101384 25101402 10 102 3.0 3.0 3.0 2.5 120 chr2R 25101282 intron lov - chr2R 25101342 intron lov - chr2R 25101402 intron lov - chr2R_10_25100001 chr2R_25100001 RAL-45 561 chr2R 25169287 25169298 chr2R 25169875 25169884 5 588 22.5 12.5 17.5 0.3 597 chr2R 25169287 exon CG34038 + chr2R 25169586 intron CG34038 + chr2R 25169884 intergenic CG34038 + chr2R_5_25165001 chr2R_25165001 RAL-45 562 chr2R 25201370 25201380 chr2R 25205393 25205402 4 4022 13.5 7.5 10.5 0.3 4032 chr2R 25201370 intron CG9380 - chr2R 25203386 intron CG9380 - chr2R 25205402 intron CG9380 - chr2R_4_25200001 chr2R_25200001 RAL-45 563 chr3L 127534 127564 chr3L 127620 127650 7 86 1.0 1.0 1.0 3.5 116 chr3L 127534 3` UTR CR45400 - chr3L 127592 3` UTR CR45400 - chr3L 127650 3` UTR CR45400 - chr3L_7_125001 chr3L_125001 RAL-45 564 chr3L 315664 315699 chr3L 315745 315781 5 82 1.5 6.0 3.8 1.0 117 chr3L 315664 intron fwd - chr3L 315722 intron fwd - chr3L 315781 intron fwd - chr3L_5_315001 chr3L_315001 RAL-45 565 chr3L 375269 375276 chr3L 375338 375360 5 79 0.0 5.0 2.5 1.4 91 chr3L 375269 intron trh - chr3L 375314 intron trh - chr3L 375360 intron trh - chr3L_5_375001 chr3L_375001 RAL-45 566 chr3L 402692 402710 chr3L 409741 409763 297 6 7052 7.0 4.5 5.8 0.9 7071 chr3L 402692 intergenic not near genes chr3L 406228 intergenic not near genes chr3L 409763 intergenic not near genes chr3L_6_405001 chr3L_405001 RAL-45 567 chr3L 421052 421087 chr3L 421148 421183 11 95 1.0 3.5 2.2 3.4 131 chr3L 421052 intergenic not near genes chr3L 421118 intergenic not near genes chr3L 421183 intergenic not near genes chr3L_11_420001 chr3L_420001 RAL-45 568 chr3L 514277 514304 chr3L 514354 514381 12 77 2.5 1.5 2.0 4.0 104 chr3L 514277 intron klar - chr3L 514329 intron klar - chr3L 514381 intron klar - chr3L_12_510001 chr3L_510001 RAL-45 569 chr3L 651405 651422 chr3L 651493 651510 4 88 3.0 5.0 4.0 0.8 105 chr3L 651405 intergenic Gale +,CG3402 - chr3L 651458 intergenic CG3402 -,Gale + chr3L 651510 intergenic CG3402 -,Gale + chr3L_4_650001 chr3L_650001 RAL-45 570 chr3L 746493 746524 chr3L 746578 746609 8 84 2.0 1.0 1.5 3.2 116 chr3L 746493 intron hng3 - chr3L 746551 intron hng3 - chr3L 746609 intron hng3 - chr3L_8_745001 chr3L_745001 RAL-45 571 chr3L 789915 789945 chr3L 790400 790430 roo 8 485 0.0 2.5 1.2 3.6 515 chr3L 789915 intergenic not near genes chr3L 790172 intergenic not near genes chr3L 790430 intergenic not near genes chr3L_8_790001 chr3L_790001 RAL-45 572 chr3L 857997 858026 chr3L 866478 866507 Tirant 12 8477 4.0 3.5 3.8 2.5 8510 chr3L 857997 intergenic not near genes chr3L 862252 intergenic not near genes chr3L 866507 5` UTR CG12502 + chr3L_12_860001 chr3L_860001 RAL-45 573 chr3L 922171 922184 chr3L 922246 922261 8 76 3.0 1.0 2.0 2.7 90 chr3L 922171 intron Glut1 + chr3L 922216 intron Glut1 + chr3L 922261 intron Glut1 + chr3L_8_920001 chr3L_920001 RAL-45 574 chr3L 925176 925206 chr3L 932602 932632 mdg1 4 7426 4.0 1.5 2.8 1.1 7456 chr3L 925176 intron Glut1 + chr3L 928904 intron Glut1 + chr3L 932632 intron Glut1 + chr3L_4_925001 chr3L_925001 RAL-45 575 chr3L 933909 933930 chr3L 934012 934033 4 103 1.0 3.0 2.0 1.3 124 chr3L 933909 intron Glut1 + chr3L 933971 intron Glut1 + chr3L 934033 intron Glut1 + chr3L_4_930001 chr3L_930001 RAL-45 576 chr3L 958318 958345 chr3L 958402 958429 6 84 2.0 0.5 1.2 2.7 111 chr3L 958318 intron Glut1 + chr3L 958374 intron Glut1 + chr3L 958429 intron Glut1 + chr3L_6_955001 chr3L_955001 RAL-45 577 chr3L 1008506 1008519 chr3L 1008582 1008594 4 76 2.5 1.5 2.0 1.3 88 chr3L 1008506 intron trio - chr3L 1008550 intron trio - chr3L 1008594 intron trio - chr3L_4_1005001 chr3L_1005001 RAL-45 578 chr3L 1015144 1015168 chr3L 1015232 1015251 5 85 2.5 4.5 3.5 1.1 107 chr3L 1015144 intron trio - chr3L 1015198 intron trio - chr3L 1015251 intron trio - chr3L_5_1015001 chr3L_1015001 RAL-45 579 chr3L 1031576 1031612 chr3L 1031652 1031686 8 74 1.5 4.0 2.8 2.1 110 chr3L 1031576 intron trio - chr3L 1031631 intron trio - chr3L 1031686 intron trio - chr3L_8_1030001 chr3L_1030001 RAL-45 580 chr3L 1039315 1039327 chr3L 1039759 1039784 6 455 2.5 3.0 2.8 1.6 469 chr3L 1039315 intron bab1 - chr3L 1039550 intron bab1 - chr3L 1039784 intron bab1 - chr3L_6_1035001 chr3L_1035001 RAL-45 581 chr3L 1040550 1040580 chr3L 1040634 1040664 7 84 2.0 2.0 2.0 2.3 114 chr3L 1040550 intron bab1 - chr3L 1040607 intron bab1 - chr3L 1040664 intron bab1 - chr3L_7_1040001 chr3L_1040001 RAL-45 582 chr3L 1047359 1047382 chr3L 1055167 1055182 412 4 7807 2.0 2.5 2.2 1.2 7823 chr3L 1047359 intron bab1 - chr3L 1051270 intron bab1 - chr3L 1055182 intron bab1 - chr3L_4_1050001 chr3L_1050001 RAL-45 583 chr3L 1103995 1104010 chr3L 1104186 1104201 4 190 2.5 5.0 3.8 0.8 206 chr3L 1103995 intergenic not near genes chr3L 1104098 intergenic not near genes chr3L 1104201 intergenic not near genes chr3L_4_1100001 chr3L_1100001 RAL-45 584 chr3L 1145242 1145268 chr3L 1145321 1145347 4 79 1.0 0.0 0.5 2.7 105 chr3L 1145242 intron bab2 - chr3L 1145294 intron bab2 - chr3L 1145347 intron bab2 - chr3L_4_1145001 chr3L_1145001 RAL-45 585 chr3L 1219596 1219625 chr3L 1227329 1227338 412 11 7729 3.0 4.5 3.8 2.3 7742 chr3L 1219596 intron mwh + chr3L 1223467 intron mwh + chr3L 1227338 intron mwh + chr3L_11_1220001 chr3L_1220001 RAL-45 586 chr3L 1288338 1288341 chr3L 1288428 1288431 4 90 0.0 3.5 1.8 1.4 93 chr3L 1288338 intron CG32333 + chr3L 1288384 intron CG32333 + chr3L 1288431 intron CG32333 + chr3L_4_1285001 chr3L_1285001 RAL-45 587 chr3L 1310981 1311014 chr3L 1315841 1315875 19 4862 52.0 47.0 49.5 0.4 4894 chr3L 1310981 exon CG2469 + chr3L 1313428 intergenic CG9186 -,CG9153 + chr3L 1315875 exon CG9153 + chr3L_19_1310001 chr3L_1310001 RAL-45 588 chr3L 1361290 1361324 chr3L 1361366 1361398 8 71 3.0 2.5 2.8 2.1 108 chr3L 1361290 intron Ptp61F - chr3L 1361344 intron Ptp61F - chr3L 1361398 intron Ptp61F - chr3L_8_1360001 chr3L_1360001 RAL-45 589 chr3L 1374433 1374445 chr3L 1374509 1374522 4 74 6.0 1.0 3.5 0.9 89 chr3L 1374433 intron,intron Ptp61F -,ru + chr3L 1374478 intron,intron Ptp61F -,ru + chr3L 1374522 intron,intron Ptp61F -,ru + chr3L_4_1370001 chr3L_1370001 RAL-45 590 chr3L 1415773 1415808 chr3L 1415855 1415890 14 81 5.5 3.5 4.5 2.5 117 chr3L 1415773 intron Ptp61F - chr3L 1415832 intron Ptp61F - chr3L 1415890 intron Ptp61F - chr3L_14_1415001 chr3L_1415001 RAL-45 591 chr3L 1505995 1506033 chr3L 1513592 1513630 17.6 10 7595 5.0 0.5 2.8 2.6 7635 chr3L 1505995 intron,intron Psa +,cue - chr3L 1509812 intron,intron Psa +,cue - chr3L 1513630 intron,intron Psa +,cue - chr3L_10_1505001 chr3L_1505001 RAL-45 592 chr3L 1924963 1924976 chr3L 1925101 1925114 5 138 2.0 2.5 2.2 1.6 151 chr3L 1924963 exon Dbx + chr3L 1925038 intron Dbx + chr3L 1925114 intron Dbx + chr3L_5_1925001 chr3L_1925001 RAL-45 593 chr3L 2139209 2139234 chr3L 2139290 2139315 7 81 1.0 3.0 2.0 2.3 106 chr3L 2139209 intron zormin - chr3L 2139262 intron zormin - chr3L 2139315 intron zormin - chr3L_7_2135001 chr3L_2135001 RAL-45 594 chr3L 2168770 2168802 chr3L 2168861 2168893 14 91 5.0 1.0 3.0 3.5 123 chr3L 2168770 exon CG15879 - chr3L 2168832 intron CG15879 - chr3L 2168893 intron CG15879 - chr3L_14_2165001 chr3L_2165001 RAL-45 595 chr3L 2308007 2308034 chr3L 2308112 2308140 6 106 1.0 3.0 2.0 2.0 133 chr3L 2308007 intergenic not near genes chr3L 2308074 intergenic not near genes chr3L 2308140 intergenic not near genes chr3L_6_2305001 chr3L_2305001 RAL-45 596 chr3L 2411337 2411342 chr3L 2411417 2411422 7 79 2.0 3.5 2.8 1.8 85 chr3L 2411337 intron CG45186 + chr3L 2411380 intron CG45186 + chr3L 2411422 intron CG45186 + chr3L_7_2410001 chr3L_2410001 RAL-45 597 chr3L 2447502 2447537 chr3L 2456658 2456693 roo 10 9152 3.5 5.0 4.2 1.9 9191 chr3L 2447502 intron CG45186 + chr3L 2452098 intron CG45186 + chr3L 2456693 intron CG45186 + chr3L_10_2450001 chr3L_2450001 RAL-45 598 chr3L 2517785 2517807 chr3L 2517908 2517944 8 132 1.5 4.0 2.8 2.1 159 chr3L 2517785 intron,5` UTR Spn -,CR45170 + chr3L 2517864 intron,5` UTR Spn -,CR45170 + chr3L 2517944 intron,5` UTR Spn -,CR45170 + chr3L_8_2515001 chr3L_2515001 RAL-45 599 chr3L 2533658 2533682 chr3L 2533735 2533763 6 76 0.0 8.0 4.0 1.2 105 chr3L 2533658 intron Spn - chr3L 2533710 intron Spn - chr3L 2533763 intron Spn - chr3L_6_2530001 chr3L_2530001 RAL-45 600 chr3L 2534621 2534643 chr3L 2534704 2534726 4 83 0.0 4.5 2.2 1.2 105 chr3L 2534621 intron Spn - chr3L 2534674 intron Spn - chr3L 2534726 exon Spn - chr3L_4_2530001 chr3L_2530001 RAL-45 601 chr3L 2703976 2703995 chr3L 2704065 2704065 5 85 2.5 5.0 3.8 1.0 89 chr3L 2703976 intron Fife - chr3L 2704020 intron Fife - chr3L 2704065 intron Fife - chr3L_5_2700001 chr3L_2700001 RAL-45 602 chr3L 2772306 2772334 chr3L 2772513 2772541 6 207 4.5 3.5 4.0 1.2 235 chr3L 2772306 5` UTR CG9977 - chr3L 2772424 intergenic CG9977 -,CG12093 - chr3L 2772541 intergenic CG12093 -,CG9977 - chr3L_6_2770001 chr3L_2770001 RAL-45 603 chr3L 2854609 2854636 chr3L 2854685 2854713 10 77 2.0 0.5 1.2 4.5 104 chr3L 2854609 intron CG43444 - chr3L 2854661 intron CG43444 - chr3L 2854713 intron CG43444 - chr3L_10_2850001 chr3L_2850001 RAL-45 604 chr3L 2873627 2873657 chr3L 2873714 2873744 7 87 1.5 0.0 0.8 3.9 117 chr3L 2873627 intron CG43444 - chr3L 2873686 intron CG43444 - chr3L 2873744 intron CG43444 - chr3L_7_2870001 chr3L_2870001 RAL-45 605 chr3L 2881511 2881540 chr3L 2881588 2881616 5 77 3.0 4.0 3.5 1.1 105 chr3L 2881511 intergenic not near genes chr3L 2881564 intergenic not near genes chr3L 2881616 intergenic not near genes chr3L_5_2880001 chr3L_2880001 RAL-45 606 chr3L 3028341 3028371 chr3L 3028420 3028450 10 77 3.5 3.5 3.5 2.2 109 chr3L 3028341 intergenic not near genes chr3L 3028396 intergenic not near genes chr3L 3028450 intergenic not near genes chr3L_10_3025001 chr3L_3025001 RAL-45 607 chr3L 3057251 3057277 chr3L 3057395 3057421 6 144 5.0 3.0 4.0 1.2 170 chr3L 3057251 exon CG32486 - chr3L 3057336 intron CG32486 - chr3L 3057421 intron CG32486 - chr3L_6_3055001 chr3L_3055001 RAL-45 608 chr3L 3061283 3061317 chr3L 3069865 3069885 Tirant 6 8574 2.0 5.0 3.5 1.3 8602 chr3L 3061283 intron CG32486 - chr3L 3065584 intron CG32486 - chr3L 3069885 intron CG32486 - chr3L_6_3065001 chr3L_3065001 RAL-45 609 chr3L 3102816 3102848 chr3L 3102902 3102934 10 86 1.5 5.5 3.5 2.2 118 chr3L 3102816 intron Cht7 - chr3L 3102875 intron Cht7 - chr3L 3102934 intron Cht7 - chr3L_10_3100001 chr3L_3100001 RAL-45 610 chr3L 3125780 3125808 chr3L 3125861 3125889 4 81 1.0 1.5 1.2 1.8 109 chr3L 3125780 intron prominin-like - chr3L 3125834 intron prominin-like - chr3L 3125889 intron prominin-like - chr3L_4_3125001 chr3L_3125001 RAL-45 611 chr3L 3154202 3154211 chr3L 3154325 3154334 4 122 2.0 0.5 1.2 1.8 132 chr3L 3154202 intron BtbVII + chr3L 3154268 intron BtbVII + chr3L 3154334 intron BtbVII + chr3L_4_3150001 chr3L_3150001 RAL-45 612 chr3L 3178731 3178758 chr3L 3178814 3178841 6 83 2.0 0.5 1.2 2.7 110 chr3L 3178731 intergenic CG14964 -,Girdin + chr3L 3178786 intergenic Girdin +,CG14964 - chr3L 3178841 intergenic Girdin +,CG14964 - chr3L_6_3175001 chr3L_3175001 RAL-45 613 chr3L 3281442 3281468 chr3L 3281938 3281964 Doc 15 495 4.5 7.5 6.0 2.1 522 chr3L 3281442 intron CG12017 + chr3L 3281703 intron CG12017 + chr3L 3281964 intron CG12017 + chr3L_15_3280001 chr3L_3280001 RAL-45 614 chr3L 3314168 3314203 chr3L 3314277 3314312 16 108 4.0 3.0 3.5 3.6 144 chr3L 3314168 intergenic ZnT63C +,Drsl2 + chr3L 3314240 intergenic Drsl2 +,ZnT63C + chr3L 3314312 intergenic Drsl2 +,ZnT63C + chr3L_16_3310001 chr3L_3310001 RAL-45 615 chr3L 3408940 3408946 chr3L 3409017 3409023 4 76 5.5 8.0 6.8 0.5 83 chr3L 3408940 intron sty - chr3L 3408982 intron sty - chr3L 3409023 intron sty - chr3L_4_3405001 chr3L_3405001 RAL-45 616 chr3L 3431942 3431963 chr3L 3432039 3432059 4 96 1.0 3.0 2.0 1.3 117 chr3L 3431942 intron eIF5B - chr3L 3432000 intron eIF5B - chr3L 3432059 intron eIF5B - chr3L_4_3430001 chr3L_3430001 RAL-45 617 chr3L 3475077 3475110 chr3L 3475521 3475554 jockey 9 444 1.0 3.0 2.0 3.0 477 chr3L 3475077 intron CG42324 + chr3L 3475316 intron CG42324 + chr3L 3475554 intron CG42324 + chr3L_9_3475001 chr3L_3475001 RAL-45 618 chr3L 3490298 3490322 chr3L 3490406 3490430 6 107 4.0 0.5 2.2 1.9 132 chr3L 3490298 intron CG42324 + chr3L 3490364 intron CG42324 + chr3L 3490430 intron CG42324 + chr3L_6_3490001 chr3L_3490001 RAL-45 619 chr3L 3565943 3565968 chr3L 3566014 3566041 6 74 2.5 2.5 2.5 1.7 98 chr3L 3565943 intron Eip63E + chr3L 3565992 intron Eip63E + chr3L 3566041 intron Eip63E + chr3L_6_3565001 chr3L_3565001 RAL-45 620 chr3L 3601297 3601328 chr3L 3606608 3606639 copia 11 5310 4.5 3.0 3.8 2.3 5342 chr3L 3601297 intron Eip63E + chr3L 3603968 intron Eip63E + chr3L 3606639 intron Eip63E + chr3L_11_3600001 chr3L_3600001 RAL-45 621 chr3L 3619398 3619420 chr3L 3619492 3619514 7 93 2.0 0.0 1.0 3.5 116 chr3L 3619398 intergenic not near genes chr3L 3619456 intergenic not near genes chr3L 3619514 intergenic not near genes chr3L_7_3615001 chr3L_3615001 RAL-45 622 chr3L 3890964 3890986 chr3L 3891045 3891067 5 81 2.5 0.0 1.2 2.3 103 chr3L 3890964 intergenic not near genes chr3L 3891016 intergenic not near genes chr3L 3891067 intergenic not near genes chr3L_5_3890001 chr3L_3890001 RAL-45 623 chr3L 3921395 3921424 chr3L 3921659 3921672 5 261 1.0 5.5 3.2 1.2 277 chr3L 3921395 intron Eip63F-1 - chr3L 3921534 intron Eip63F-1 - chr3L 3921672 intron Eip63F-1 - chr3L_5_3920001 chr3L_3920001 RAL-45 624 chr3L 4038035 4038058 chr3L 4038116 4038140 4 82 1.5 1.5 1.5 1.6 105 chr3L 4038035 3` UTR CG11593 - chr3L 4038088 3` UTR CG11593 - chr3L 4038140 3` UTR CG11593 - chr3L_4_4035001 chr3L_4035001 RAL-45 625 chr3L 4538372 4538390 chr3L 4541470 4541488 5 3098 24.0 4.5 14.2 0.3 3116 chr3L 4538372 exon CG11353 + chr3L 4539930 exon CG32243 - chr3L 4541488 intergenic CG32243 - chr3L_5_4535001 chr3L_4535001 RAL-45 626 chr3L 4597219 4597245 chr3L 4597301 4597327 9 80 0.5 4.0 2.2 2.8 108 chr3L 4597219 intron Src64B - chr3L 4597273 intron Src64B - chr3L 4597327 intron Src64B - chr3L_9_4595001 chr3L_4595001 RAL-45 627 chr3L 4597246 4597248 chr3L 4597299 4597330 4 75 0.5 4.0 2.2 1.2 84 chr3L 4597246 intron Src64B - chr3L 4597288 intron Src64B - chr3L 4597330 intron Src64B - chr3L_4_4595001 chr3L_4595001 RAL-45 628 chr3L 4607278 4607282 chr3L 4607369 4607373 5 91 1.0 1.5 1.2 2.3 95 chr3L 4607278 intron Src64B - chr3L 4607326 intron Src64B - chr3L 4607373 intron Src64B - chr3L_5_4605001 chr3L_4605001 RAL-45 629 chr3L 4744401 4744421 chr3L 4744481 4744501 7 80 6.5 0.0 3.2 1.7 100 chr3L 4744401 intron RhoGEF64C + chr3L 4744451 intron RhoGEF64C + chr3L 4744501 intron RhoGEF64C + chr3L_7_4740001 chr3L_4740001 RAL-45 630 chr3L 4797623 4797653 chr3L 4797702 4797732 8 79 0.5 2.5 1.5 3.2 109 chr3L 4797623 intergenic not near genes chr3L 4797678 intergenic not near genes chr3L 4797732 intergenic not near genes chr3L_8_4795001 chr3L_4795001 RAL-45 631 chr3L 4858301 4858333 chr3L 4858391 4858423 15 87 5.5 2.0 3.8 3.1 122 chr3L 4858301 intergenic not near genes chr3L 4858362 intergenic not near genes chr3L 4858423 intergenic not near genes chr3L_15_4855001 chr3L_4855001 RAL-45 632 chr3L 4901137 4901156 chr3L 4907327 4907346 diver 5 6190 3.5 0.0 1.8 1.8 6209 chr3L 4901137 intergenic CG13704 + chr3L 4904242 intergenic not near genes chr3L 4907346 intergenic not near genes chr3L_5_4900001 chr3L_4900001 RAL-45 633 chr3L 5104482 5104511 chr3L 5124616 5124645 6 20134 0.5 0.0 0.2 5.0 20163 chr3L 5104482 intergenic not near genes chr3L 5114564 intergenic not near genes chr3L 5124645 intergenic not near genes chr3L_6_5110001 chr3L_5110001 RAL-45 634 chr3L 5164648 5164664 chr3L 5164724 5164740 4 76 1.0 0.5 0.8 2.2 92 chr3L 5164648 intron shep - chr3L 5164694 intron shep - chr3L 5164740 intron shep - chr3L_4_5160001 chr3L_5160001 RAL-45 635 chr3L 5176092 5176094 chr3L 7032330 7032332 4 1856238 5.0 6.5 5.8 0.6 1856240 chr3L 5176092 intron shep - chr3L 6104212 intron Ets65A + chr3L 7032332 intron Mp + chr3L_4_6100001 chr3L_6100001 RAL-45 636 chr3L 5212244 5212269 chr3L 5212323 5212352 11 80 2.5 2.0 2.2 3.4 108 chr3L 5212244 intron shep - chr3L 5212298 intron shep - chr3L 5212352 intron shep - chr3L_11_5210001 chr3L_5210001 RAL-45 637 chr3L 5342656 5342682 chr3L 5342762 5342789 7 104 2.0 3.0 2.5 2.0 133 chr3L 5342656 intergenic not near genes chr3L 5342722 intergenic not near genes chr3L 5342789 intergenic not near genes chr3L_7_5340001 chr3L_5340001 RAL-45 638 chr3L 5388210 5388221 chr3L 5388523 5388545 5 322 7.5 3.0 5.2 0.8 335 chr3L 5388210 intergenic not near genes chr3L 5388378 intergenic not near genes chr3L 5388545 intergenic not near genes chr3L_5_5385001 chr3L_5385001 RAL-45 639 chr3L 5498386 5498425 chr3L 5498475 5498501 4 76 0.0 3.0 1.5 1.6 115 chr3L 5498386 exon blanks - chr3L 5498444 exon blanks - chr3L 5498501 exon blanks - chr3L_4_5495001 chr3L_5495001 RAL-45 640 chr3L 5522005 5522037 chr3L 5522273 5522303 8 268 2.5 2.0 2.2 2.5 298 chr3L 5522005 intron Lkr - chr3L 5522154 intron Lkr - chr3L 5522303 intron Lkr - chr3L_8_5520001 chr3L_5520001 RAL-45 641 chr3L 5558355 5558385 chr3L 5558444 5558472 13 89 3.5 3.0 3.2 3.1 117 chr3L 5558355 intergenic not near genes chr3L 5558414 intergenic not near genes chr3L 5558472 intergenic not near genes chr3L_13_5555001 chr3L_5555001 RAL-45 642 chr3L 5572147 5572150 chr3L 5572249 5572260 4 107 2.5 8.0 5.2 0.6 113 chr3L 5572147 intron Msr-110 - chr3L 5572204 intron Msr-110 - chr3L 5572260 intron Msr-110 - chr3L_4_5570001 chr3L_5570001 RAL-45 643 chr3L 5836152 5836181 chr3L 5836282 5836306 8 129 1.5 3.5 2.5 2.3 154 chr3L 5836152 intron vn - chr3L 5836229 intron vn - chr3L 5836306 intron vn - chr3L_8_5835001 chr3L_5835001 RAL-45 644 chr3L 5910034 5910062 chr3L 5910275 5910303 pogo 4 241 1.0 2.0 1.5 1.6 269 chr3L 5910034 intron CG13288 + chr3L 5910168 intron CG13288 + chr3L 5910303 intron CG13288 + chr3L_4_5910001 chr3L_5910001 RAL-45 645 chr3L 5926316 5926322 chr3L 5926506 5926512 BS 4 190 5.5 3.0 4.2 0.8 196 chr3L 5926316 intron Vap-33B + chr3L 5926414 intron Vap-33B + chr3L 5926512 intron Vap-33B + chr3L_4_5925001 chr3L_5925001 RAL-45 646 chr3L 5926329 5926351 chr3L 5926505 5926511 BS 7 180 2.0 3.0 2.5 2.0 182 chr3L 5926329 intron Vap-33B + chr3L 5926420 intron Vap-33B + chr3L 5926511 intron Vap-33B + chr3L_7_5925001 chr3L_5925001 RAL-45 647 chr3L 6052652 6052667 chr3L 6052737 6052752 13 85 8.5 13.0 10.8 1.1 100 chr3L 6052652 exon Jon65Aii + chr3L 6052702 intron Jon65Aii + chr3L 6052752 exon Jon65Aii + chr3L_13_6050001 chr3L_6050001 RAL-45 648 chr3L 6220915 6220938 chr3L 6230067 6230090 roo 7 9152 3.5 5.5 4.5 1.3 9175 chr3L 6220915 5` UTR pncr008:3L + chr3L 6225502 intergenic not near genes chr3L 6230090 intergenic not near genes chr3L_7_6225001 chr3L_6225001 RAL-45 649 chr3L 6261837 6261852 chr3L 6262099 6262113 7 262 4.0 3.5 3.8 1.5 276 chr3L 6261837 intron ImpL3 - chr3L 6261975 intron ImpL3 - chr3L 6262113 intron ImpL3 - chr3L_7_6260001 chr3L_6260001 RAL-45 650 chr3L 6335009 6335035 chr3L 6335479 6335506 297 6 470 4.0 1.5 2.8 1.6 497 chr3L 6335009 intron CG13300 - chr3L 6335258 intron CG13300 - chr3L 6335506 intron CG13300 - chr3L_6_6335001 chr3L_6335001 RAL-45 651 chr3L 6483856 6483891 chr3L 6483933 6483968 4 77 0.5 0.5 0.5 2.7 112 chr3L 6483856 intron CG42747 + chr3L 6483912 intron CG42747 + chr3L 6483968 intron CG42747 + chr3L_4_6480001 chr3L_6480001 RAL-45 652 chr3L 6637655 6637682 chr3L 6638078 6638106 7 424 3.0 2.0 2.5 2.0 451 chr3L 6637655 intergenic not near genes chr3L 6637880 intergenic not near genes chr3L 6638106 intergenic not near genes chr3L_7_6635001 chr3L_6635001 RAL-45 653 chr3L 6855920 6855955 chr3L 6860703 6860739 Doc 6 4784 4.5 0.5 2.5 1.7 4819 chr3L 6855920 intergenic not near genes chr3L 6858330 intergenic not near genes chr3L 6860739 intergenic not near genes chr3L_6_6855001 chr3L_6855001 RAL-45 654 chr3L 6887517 6887547 chr3L 6895009 6895037 roo 6 7492 2.0 0.0 1.0 3.0 7520 chr3L 6887517 intergenic not near genes chr3L 6891277 intergenic not near genes chr3L 6895037 intergenic not near genes chr3L_6_6890001 chr3L_6890001 RAL-45 655 chr3L 6915810 6915834 chr3L 6916091 6916114 4 281 1.0 0.5 0.8 2.2 304 chr3L 6915810 intergenic not near genes chr3L 6915962 intergenic not near genes chr3L 6916114 intergenic not near genes chr3L_4_6915001 chr3L_6915001 RAL-45 656 chr3L 6958981 6959004 chr3L 6963561 6963583 9 4581 26.5 28.5 27.5 0.3 4602 chr3L 6958981 exon Surf1 + chr3L 6961282 exon sgl - chr3L 6963583 intron sgl - chr3L_9_6960001 chr3L_6960001 RAL-45 657 chr3L 6974503 6974522 chr3L 6974604 6974623 12 100 0.0 6.5 3.2 2.9 120 chr3L 6974503 intron Galphai - chr3L 6974563 intron Galphai - chr3L 6974623 intron Galphai - chr3L_12_6970001 chr3L_6970001 RAL-45 658 chr3L 6982864 6982884 chr3L 6983032 6983052 4 168 4.0 2.0 3.0 1.0 188 chr3L 6982864 intergenic not near genes chr3L 6982958 intergenic not near genes chr3L 6983052 intergenic CG32388 -,CG43439 - chr3L_4_6980001 chr3L_6980001 RAL-45 659 chr3L 7042160 7042190 chr3L 7042266 7042292 11 106 2.5 6.0 4.2 2.1 132 chr3L 7042160 intron Mp + chr3L 7042226 intron Mp + chr3L 7042292 intron Mp + chr3L_11_7040001 chr3L_7040001 RAL-45 660 chr3L 7192414 7192446 chr3L 7192499 7192531 10 84 2.0 1.5 1.8 3.6 117 chr3L 7192414 intergenic not near genes chr3L 7192472 intergenic not near genes chr3L 7192531 intergenic not near genes chr3L_10_7190001 chr3L_7190001 RAL-45 661 chr3L 7201271 7201505 chr3L 7201353 7201611 15 95 2.5 4.5 3.5 3.3 340 chr3L 7201271 intergenic not near genes chr3L 7201441 intergenic not near genes chr3L 7201611 intergenic not near genes chr3L_15_7200001 chr3L_7200001 RAL-45 662 chr3L 7277106 7277134 chr3L 7277208 7277236 7 102 4.5 1.0 2.8 1.8 130 chr3L 7277106 exon unc-13-4A - chr3L 7277171 intron unc-13-4A - chr3L 7277236 intron unc-13-4A - chr3L_7_7275001 chr3L_7275001 RAL-45 663 chr3L 7377315 7377347 chr3L 7380420 7380452 297 5 3104 0.5 3.0 1.8 1.8 3137 chr3L 7377315 intron SMSr - chr3L 7378884 intron SMSr - chr3L 7380452 intron SMSr - chr3L_5_7375001 chr3L_7375001 RAL-45 664 chr3L 7445368 7445389 chr3L 7445440 7445464 7 75 5.0 6.5 5.8 1.0 96 chr3L 7445368 5` UTR CG42458 + chr3L 7445416 5` UTR CG42458 + chr3L 7445464 exon CG42458 + chr3L_7_7445001 chr3L_7445001 RAL-45 665 chr3L 7498761 7498780 chr3L 7503538 7503557 F-element 4 4777 1.5 1.5 1.5 1.6 4796 chr3L 7498761 5` UTR CG8539 - chr3L 7501159 intergenic not near genes chr3L 7503557 intergenic not near genes chr3L_4_7500001 chr3L_7500001 RAL-45 666 chr3L 7572286 7572314 chr3L 7572372 7572401 10 87 1.5 3.0 2.2 3.1 115 chr3L 7572286 intergenic not near genes chr3L 7572344 intergenic not near genes chr3L 7572401 intergenic not near genes chr3L_10_7570001 chr3L_7570001 RAL-45 667 chr3L 7591144 7591180 chr3L 7591235 7591250 8 87 2.0 5.0 3.5 1.8 106 chr3L 7591144 intergenic CG7716 - chr3L 7591197 intergenic CG7716 - chr3L 7591250 intergenic CG7716 - chr3L_8_7590001 chr3L_7590001 RAL-45 668 chr3L 7691838 7691862 chr3L 7691930 7691954 5 92 1.0 1.5 1.2 2.3 116 chr3L 7691838 intron,intron,intron CG32373 +,Ank2 -,CG44195 - chr3L 7691896 intron,intron,intron CG32373 +,Ank2 -,CG44195 - chr3L 7691954 intron,intron,intron CG32373 +,Ank2 -,CG44195 - chr3L_5_7690001 chr3L_7690001 RAL-45 669 chr3L 7801746 7801774 chr3L 7801985 7802013 7 239 1.0 2.5 1.8 2.5 267 chr3L 7801746 intron CG32369 - chr3L 7801880 intron CG32369 - chr3L 7802013 intron CG32369 - chr3L_7_7800001 chr3L_7800001 RAL-45 670 chr3L 7865570 7865581 chr3L 7865710 7865721 4 140 2.5 0.0 1.2 1.8 151 chr3L 7865570 intron Pdp1 - chr3L 7865646 intron Pdp1 - chr3L 7865721 intron Pdp1 - chr3L_4_7865001 chr3L_7865001 RAL-45 671 chr3L 7886523 7886543 chr3L 7889041 7889061 Stalker4 5 2517 2.5 0.5 1.5 2.0 2538 chr3L 7886523 intron CG32365 + chr3L 7887792 intron CG32365 + chr3L 7889061 intron CG32365 + chr3L_5_7885001 chr3L_7885001 RAL-45 672 chr3L 8206586 8206594 chr3L 8206677 8206684 4 91 3.5 1.0 2.2 1.2 98 chr3L 8206586 intergenic not near genes chr3L 8206635 intergenic not near genes chr3L 8206684 intergenic not near genes chr3L_4_8205001 chr3L_8205001 RAL-45 673 chr3L 8214733 8214749 chr3L 8214818 8214835 6 86 5.0 2.5 3.8 1.2 102 chr3L 8214733 intergenic not near genes chr3L 8214784 intergenic CG8012 + chr3L 8214835 intergenic CG8012 + chr3L_6_8210001 chr3L_8210001 RAL-45 674 chr3L 8248315 8248343 chr3L 8248398 8248429 6 88 3.0 1.0 2.0 2.0 114 chr3L 8248315 intron Dscam4 + chr3L 8248372 intron Dscam4 + chr3L 8248429 intron Dscam4 + chr3L_6_8245001 chr3L_8245001 RAL-45 675 chr3L 8295789 8295823 chr3L 8295947 8295981 7 158 2.0 4.5 3.2 1.7 192 chr3L 8295789 intergenic CG7201 - chr3L 8295885 intergenic not near genes chr3L 8295981 intergenic not near genes chr3L_7_8295001 chr3L_8295001 RAL-45 676 chr3L 8319447 8319468 chr3L 8319521 8319544 7 74 2.5 2.0 2.2 2.2 97 chr3L 8319447 intergenic CG43059 - chr3L 8319496 intergenic not near genes chr3L 8319544 intergenic not near genes chr3L_7_8315001 chr3L_8315001 RAL-45 677 chr3L 8383978 8384009 chr3L 8384059 8384065 11 68 3.0 4.0 3.5 2.4 87 chr3L 8383978 intron ImpE1 + chr3L 8384022 intron ImpE1 + chr3L 8384065 intron ImpE1 + chr3L_11_8380001 chr3L_8380001 RAL-45 678 chr3L 8481800 8481801 chr3L 8490946 8490960 roo 4 9156 4.0 6.0 5.0 0.7 9160 chr3L 8481800 intron CG43163 - chr3L 8486380 intron CG43163 - chr3L 8490960 intron CG43163 - chr3L_4_8485001 chr3L_8485001 RAL-45 679 chr3L 8606780 8606804 chr3L 8607218 8607242 8 438 2.0 3.5 2.8 2.1 462 chr3L 8606780 intron CG6282 + chr3L 8607011 intron CG6282 + chr3L 8607242 intron CG6282 + chr3L_8_8605001 chr3L_8605001 RAL-45 680 chr3L 8683362 8683374 chr3L 8683527 8683539 6 165 5.5 1.5 3.5 1.3 177 chr3L 8683362 intergenic not near genes chr3L 8683450 intergenic not near genes chr3L 8683539 intergenic not near genes chr3L_6_8680001 chr3L_8680001 RAL-45 681 chr3L 8700982 8701010 chr3L 8701065 8701093 9 82 3.0 3.0 3.0 2.2 111 chr3L 8700982 intergenic not near genes chr3L 8701038 intergenic not near genes chr3L 8701093 intergenic not near genes chr3L_9_8700001 chr3L_8700001 RAL-45 682 chr3L 8791283 8791300 chr3L 8796695 8796720 I-element 6 5418 3.5 1.0 2.2 1.9 5437 chr3L 8791283 exon Fhos + chr3L 8794002 intron Fhos + chr3L 8796720 intron Fhos + chr3L_6_8790001 chr3L_8790001 RAL-45 683 chr3L 8832402 8832432 chr3L 8832495 8832525 8 93 0.5 4.0 2.2 2.5 123 chr3L 8832402 intron dally + chr3L 8832464 intron dally + chr3L 8832525 intron dally + chr3L_8_8830001 chr3L_8830001 RAL-45 684 chr3L 9003952 9003971 chr3L 9004037 9004056 4 85 1.5 1.0 1.2 1.8 104 chr3L 9003952 intergenic not near genes chr3L 9004004 intergenic not near genes chr3L 9004056 intergenic not near genes chr3L_4_9000001 chr3L_9000001 RAL-45 685 chr3L 9076925 9076946 chr3L 9084485 9084506 412 6 7560 5.5 1.5 3.5 1.3 7581 chr3L 9076925 exon Tequila + chr3L 9080716 intron Tequila + chr3L 9084506 exon Tequila + chr3L_6_9080001 chr3L_9080001 RAL-45 686 chr3L 9109752 9109773 chr3L 9110357 9110378 6 605 2.0 1.5 1.8 2.1 626 chr3L 9109752 intron bol - chr3L 9110065 intron bol - chr3L 9110378 intron bol - chr3L_6_9110001 chr3L_9110001 RAL-45 687 chr3L 9130556 9130582 chr3L 9134317 9134332 412 9 3760 5.0 3.0 4.0 1.8 3776 chr3L 9130556 intergenic bol - chr3L 9132444 intergenic not near genes chr3L 9134332 intergenic Dhpr + chr3L_9_9130001 chr3L_9130001 RAL-45 688 chr3L 9219242 9219281 chr3L 9219914 9219937 jockey 9 666 4.5 3.5 4.0 1.8 695 chr3L 9219242 intergenic not near genes chr3L 9219590 intergenic not near genes chr3L 9219937 intergenic not near genes chr3L_9_9215001 chr3L_9215001 RAL-45 689 chr3L 9232874 9232900 chr3L 9232956 9232982 6 81 0.5 1.0 0.8 3.3 108 chr3L 9232874 intergenic not near genes chr3L 9232928 intergenic not near genes chr3L 9232982 intergenic not near genes chr3L_6_9230001 chr3L_9230001 RAL-45 690 chr3L 9320406 9320426 chr3L 9320486 9320507 7 80 4.5 6.0 5.2 1.1 101 chr3L 9320406 intergenic not near genes chr3L 9320456 intergenic not near genes chr3L 9320507 intergenic not near genes chr3L_7_9320001 chr3L_9320001 RAL-45 691 chr3L 9513460 9513468 chr3L 9513529 9513555 4 76 1.0 0.5 0.8 2.2 95 chr3L 9513460 intergenic CG33702 - chr3L 9513508 intergenic CG33702 - chr3L 9513555 intergenic CG33702 - chr3L_4_9510001 chr3L_9510001 RAL-45 692 chr3L 9559381 9559411 chr3L 9559515 9559546 5 134 3.5 4.5 4.0 1.0 165 chr3L 9559381 intron CG42673 + chr3L 9559464 intron CG42673 + chr3L 9559546 intron CG42673 + chr3L_5_9555001 chr3L_9555001 RAL-45 693 chr3L 9639290 9639315 chr3L 9639583 9639595 6 288 2.5 4.5 3.5 1.3 305 chr3L 9639290 intron,exon fry -,CG18179 + chr3L 9639442 intron,exon fry -,CG18179 + chr3L 9639595 intron,exon fry -,CG18179 + chr3L_6_9635001 chr3L_9635001 RAL-45 694 chr3L 9766249 9766275 chr3L 9766515 9766542 5 267 2.5 4.0 3.2 1.2 293 chr3L 9766249 intron CG8177 + chr3L 9766396 intron CG8177 + chr3L 9766542 intron CG8177 + chr3L_5_9765001 chr3L_9765001 RAL-45 695 chr3L 9829050 9829079 chr3L 9829131 9829161 7 79 2.0 2.5 2.2 2.2 111 chr3L 9829050 intron CG43897 + chr3L 9829106 intron CG43897 + chr3L 9829161 intron CG43897 + chr3L_7_9825001 chr3L_9825001 RAL-45 696 chr3L 9918879 9918906 chr3L 9918974 9919000 16 95 3.0 2.0 2.5 4.6 121 chr3L 9918879 intron CG34356 + chr3L 9918940 intron CG34356 + chr3L 9919000 intron CG34356 + chr3L_16_9915001 chr3L_9915001 RAL-45 697 chr3L 9966782 9966812 chr3L 9970292 9970321 18 3510 17.0 40.5 28.8 0.6 3539 chr3L 9966782 3` UTR,3` UTR CG34356 +,CG6685 - chr3L 9968552 5` UTR Nc + chr3L 9970321 exon Nc + chr3L_18_9965001 chr3L_9965001 RAL-45 698 chr3L 10003159 10003173 chr3L 10003256 10003270 5 97 3.0 2.5 2.8 1.3 111 chr3L 10003159 intron dpr6 + chr3L 10003214 intron dpr6 + chr3L 10003270 intron dpr6 + chr3L_5_10000001 chr3L_10000001 RAL-45 699 chr3L 10052897 10052928 chr3L 10052999 10053031 10 102 2.0 2.5 2.2 3.1 134 chr3L 10052897 intron dpr6 + chr3L 10052964 intron dpr6 + chr3L 10053031 intron dpr6 + chr3L_10_10050001 chr3L_10050001 RAL-45 700 chr3L 10214734 10214831 chr3L 10214821 10214933 5 99 0.0 0.0 0.0 5.0 199 chr3L 10214734 intergenic not near genes chr3L 10214834 intergenic not near genes chr3L 10214933 intergenic not near genes chr3L_5_10210001 chr3L_10210001 RAL-45 701 chr3L 10222741 10222768 chr3L 10222821 10222848 5 80 1.5 1.5 1.5 2.0 107 chr3L 10222741 intron scramb1 - chr3L 10222794 intron scramb1 - chr3L 10222848 intron scramb1 - chr3L_5_10220001 chr3L_10220001 RAL-45 702 chr3L 10250334 10250360 chr3L 10250425 10250451 6 91 0.0 0.5 0.2 5.0 117 chr3L 10250334 intergenic not near genes chr3L 10250392 intergenic not near genes chr3L 10250451 intergenic not near genes chr3L_6_10250001 chr3L_10250001 RAL-45 703 chr3L 10298673 10298698 chr3L 10298760 10298785 5 87 0.0 0.0 0.0 5.0 112 chr3L 10298673 intergenic not near genes chr3L 10298729 intergenic not near genes chr3L 10298785 intergenic not near genes chr3L_5_10295001 chr3L_10295001 RAL-45 704 chr3L 10308755 10308775 chr3L 10308832 10308850 6 77 2.5 3.5 3.0 1.5 95 chr3L 10308755 intergenic not near genes chr3L 10308802 intergenic not near genes chr3L 10308850 intergenic not near genes chr3L_6_10305001 chr3L_10305001 RAL-45 705 chr3L 10381321 10381338 chr3L 10381400 10381417 6 79 5.5 0.0 2.8 1.6 96 chr3L 10381321 intergenic not near genes chr3L 10381369 intergenic not near genes chr3L 10381417 intergenic not near genes chr3L_6_10380001 chr3L_10380001 RAL-45 706 chr3L 10417567 10417604 chr3L 10417644 10417681 17 77 5.5 2.5 4.0 3.4 114 chr3L 10417567 intergenic not near genes chr3L 10417624 intergenic not near genes chr3L 10417681 intergenic not near genes chr3L_17_10415001 chr3L_10415001 RAL-45 707 chr3L 10559489 10559519 chr3L 10559836 10559866 7 346 3.0 2.0 2.5 2.0 377 chr3L 10559489 intron A2bp1 + chr3L 10559678 intron A2bp1 + chr3L 10559866 intron A2bp1 + chr3L_7_10555001 chr3L_10555001 RAL-45 708 chr3L 10601212 10601230 chr3L 10601303 10601323 7 92 1.0 2.0 1.5 2.8 111 chr3L 10601212 intergenic not near genes chr3L 10601268 intergenic not near genes chr3L 10601323 intergenic not near genes chr3L_7_10600001 chr3L_10600001 RAL-45 709 chr3L 10658082 10658207 chr3L 10658159 10658332 9 115 0.0 0.0 0.0 9.0 250 chr3L 10658082 intron CG32066 - chr3L 10658207 intron CG32066 - chr3L 10658332 intron CG32066 - chr3L_9_10655001 chr3L_10655001 RAL-45 710 chr3L 10748750 10748769 chr3L 10748832 10748861 6 90 0.5 1.5 1.0 3.0 111 chr3L 10748750 intergenic not near genes chr3L 10748806 intergenic not near genes chr3L 10748861 intergenic not near genes chr3L_6_10745001 chr3L_10745001 RAL-45 711 chr3L 10762831 10762846 chr3L 10762913 10762930 5 83 6.0 1.5 3.8 1.0 99 chr3L 10762831 intergenic not near genes chr3L 10762880 intergenic not near genes chr3L 10762930 intergenic not near genes chr3L_5_10760001 chr3L_10760001 RAL-45 712 chr3L 10880276 10880287 chr3L 10880416 10880427 4 140 1.0 0.5 0.8 2.2 151 chr3L 10880276 intergenic Blos4 +,CG6409 - chr3L 10880352 intergenic Blos4 +,CG6409 - chr3L 10880427 intergenic Blos4 +,CG6409 - chr3L_4_10880001 chr3L_10880001 RAL-45 713 chr3L 11087058 11087089 chr3L 11088847 11088878 S-element 12 1789 2.0 4.0 3.0 3.0 1820 chr3L 11087058 intron JIL-1 - chr3L 11087968 intron JIL-1 - chr3L 11088878 intron JIL-1 - chr3L_12_11085001 chr3L_11085001 RAL-45 714 chr3L 11135772 11135803 chr3L 11135857 11135887 8 85 0.5 2.0 1.2 3.6 115 chr3L 11135772 intergenic CG32082 +,CG14143 + chr3L 11135830 intergenic CG32082 +,CG14143 + chr3L 11135887 intergenic CG32082 +,CG14143 + chr3L_8_11135001 chr3L_11135001 RAL-45 715 chr3L 11153576 11153582 chr3L 11154046 11154051 4 470 0.0 4.5 2.2 1.2 475 chr3L 11153576 intron CG32082 + chr3L 11153814 intron CG32082 + chr3L 11154051 intron CG32082 + chr3L_4_11150001 chr3L_11150001 RAL-45 716 chr3L 11264466 11264493 chr3L 11271418 11271445 17.6 5 6952 1.0 0.5 0.8 2.8 6979 chr3L 11264466 intergenic not near genes chr3L 11267956 intergenic not near genes chr3L 11271445 intergenic not near genes chr3L_5_11265001 chr3L_11265001 RAL-45 717 chr3L 11329696 11329711 chr3L 11332900 11332900 jockey 5 3199 4.5 1.5 3.0 1.2 3204 chr3L 11329696 intergenic not near genes chr3L 11331298 intergenic not near genes chr3L 11332900 intergenic not near genes chr3L_5_11330001 chr3L_11330001 RAL-45 718 chr3L 11329714 11329727 chr3L 11332894 11332932 jockey 7 3196 2.5 1.5 2.0 2.3 3218 chr3L 11329714 intergenic not near genes chr3L 11331323 intergenic not near genes chr3L 11332932 intergenic not near genes chr3L_7_11330001 chr3L_11330001 RAL-45 719 chr3L 11383987 11383993 chr3L 11384040 11384051 6 71 3.0 3.0 3.0 1.5 64 chr3L 11383987 3` UTR CR42755 - chr3L 11384019 3` UTR CR42755 - chr3L 11384051 3` UTR CR42755 - chr3L_6_11380001 chr3L_11380001 RAL-45 720 chr3L 11435563 11435583 chr3L 11435732 11435752 11 169 3.0 2.5 2.8 2.9 189 chr3L 11435563 intergenic CR44548 +,CG6149 - chr3L 11435658 5` UTR CR44548 + chr3L 11435752 5` UTR CR44548 + chr3L_11_11435001 chr3L_11435001 RAL-45 721 chr3L 11560791 11560812 chr3L 11560869 11560890 5 78 0.5 2.0 1.2 2.3 99 chr3L 11560791 intron Mob2 - chr3L 11560840 intron Mob2 - chr3L 11560890 intron Mob2 - chr3L_5_11560001 chr3L_11560001 RAL-45 722 chr3L 11564792 11564811 chr3L 11572411 11572436 412 5 7621 3.0 2.5 2.8 1.3 7644 chr3L 11564792 exon CG33267 + chr3L 11568614 intron CG33267 + chr3L 11572436 exon CG33267 + chr3L_5_11565001 chr3L_11565001 RAL-45 723 chr3L 11588742 11588758 chr3L 11588898 11588914 4 156 0.0 3.5 1.8 1.4 172 chr3L 11588742 intergenic not near genes chr3L 11588828 intergenic not near genes chr3L 11588914 intergenic not near genes chr3L_4_11585001 chr3L_11585001 RAL-45 724 chr3L 11849335 11849353 chr3L 11849435 11849453 9 100 0.5 1.5 1.0 4.5 118 chr3L 11849335 intergenic not near genes chr3L 11849394 intergenic not near genes chr3L 11849453 intergenic not near genes chr3L_9_11845001 chr3L_11845001 RAL-45 725 chr3L 11850148 11850156 chr3L 11850243 11850251 4 94 2.0 0.0 1.0 2.0 103 chr3L 11850148 intergenic CG44837 - chr3L 11850200 intergenic CG44837 - chr3L 11850251 intergenic CG44837 - chr3L_4_11850001 chr3L_11850001 RAL-45 726 chr3L 11864552 11864579 chr3L 11865847 11865874 pogo 6 1295 2.5 3.5 3.0 1.5 1322 chr3L 11864552 intron CG44837 - chr3L 11865213 intron CG44837 - chr3L 11865874 intron CG44837 - chr3L_6_11865001 chr3L_11865001 RAL-45 727 chr3L 11901579 11901593 chr3L 11901709 11901722 7 128 5.5 7.5 6.5 0.9 143 chr3L 11901579 intron CG44837 - chr3L 11901650 intron CG44837 - chr3L 11901722 intron CG44837 - chr3L_7_11900001 chr3L_11900001 RAL-45 728 chr3L 11936614 11936630 chr3L 11936683 11936709 5 73 0.5 3.0 1.8 1.8 95 chr3L 11936614 intron CG44837 - chr3L 11936662 intron CG44837 - chr3L 11936709 intron CG44837 - chr3L_5_11935001 chr3L_11935001 RAL-45 729 chr3L 11943494 11943509 chr3L 11943595 11943610 4 100 1.0 1.0 1.0 2.0 116 chr3L 11943494 intergenic Rpt4R +,CG5883 - chr3L 11943552 intergenic Rpt4R +,CG5883 - chr3L 11943610 intergenic CG5883 -,Rpt4R + chr3L_4_11940001 chr3L_11940001 RAL-45 730 chr3L 12013915 12013935 chr3L 12014006 12014026 5 91 4.5 4.0 4.2 1.0 111 chr3L 12013915 intron rols - chr3L 12013970 intron rols - chr3L 12014026 intron rols - chr3L_5_12010001 chr3L_12010001 RAL-45 731 chr3L 12158503 12158523 chr3L 12158724 12158742 6 220 17.0 32.0 24.5 0.2 239 chr3L 12158503 intron CG9760 - chr3L 12158622 intron CG9760 - chr3L 12158742 intron CG9760 - chr3L_6_12155001 chr3L_12155001 RAL-45 732 chr3L 12158780 12158809 chr3L 12160250 12160279 10 1470 49.0 21.0 35.0 0.3 1499 chr3L 12158780 intron CG9760 - chr3L 12159530 exon CG9760 - chr3L 12160279 intron CG9760 - chr3L_10_12155001 chr3L_12155001 RAL-45 733 chr3L 12156431 12156461 chr3L 12160316 12160346 11 3885 8.0 30.5 19.2 0.5 3915 chr3L 12156431 3` UTR Nrx-IV + chr3L 12158388 intron CG9760 - chr3L 12160346 intron CG9760 - chr3L_11_12155001 chr3L_12155001 RAL-45 734 chr3L 12304090 12304114 chr3L 12304166 12304169 8 73 6.0 6.5 6.2 1.1 79 chr3L 12304090 intergenic not near genes chr3L 12304130 intergenic not near genes chr3L 12304169 intergenic not near genes chr3L_8_12300001 chr3L_12300001 RAL-45 735 chr3L 12326759 12326776 chr3L 12326834 12326852 5 76 2.0 2.5 2.2 1.6 93 chr3L 12326759 intergenic not near genes chr3L 12326806 intergenic not near genes chr3L 12326852 intergenic not near genes chr3L_5_12325001 chr3L_12325001 RAL-45 736 chr3L 12412735 12412747 chr3L 12412820 12412832 6 85 2.0 1.5 1.8 2.1 97 chr3L 12412735 intron CG32103 - chr3L 12412784 intron CG32103 - chr3L 12412832 intron CG32103 - chr3L_6_12410001 chr3L_12410001 RAL-45 737 chr3L 12565414 12565441 chr3L 12565494 12565521 6 80 2.0 2.5 2.2 1.9 107 chr3L 12565414 intron sowah - chr3L 12565468 intron sowah - chr3L 12565521 intron sowah - chr3L_6_12565001 chr3L_12565001 RAL-45 738 chr3L 12801980 12802012 chr3L 12802056 12802088 6 76 1.5 1.5 1.5 2.4 108 chr3L 12801980 intron Atg1 - chr3L 12802034 intron Atg1 - chr3L 12802088 intron Atg1 - chr3L_6_12800001 chr3L_12800001 RAL-45 739 chr3L 12874941 12874959 chr3L 12877233 12877251 jockey 4 2292 1.5 1.0 1.2 1.8 2310 chr3L 12874941 intergenic not near genes chr3L 12876096 intergenic not near genes chr3L 12877251 intergenic not near genes chr3L_4_12875001 chr3L_12875001 RAL-45 740 chr3L 12894802 12894822 chr3L 12894880 12894881 9 74 1.5 3.5 2.5 2.6 79 chr3L 12894802 intergenic CG14118 + chr3L 12894842 intergenic CG14118 + chr3L 12894881 intergenic CG14118 + chr3L_9_12890001 chr3L_12890001 RAL-45 741 chr3L 12919285 12919313 chr3L 12924755 12924761 Rt1c 6 5467 1.5 2.5 2.0 2.0 5476 chr3L 12919285 intergenic not near genes chr3L 12922023 intergenic not near genes chr3L 12924761 intergenic not near genes chr3L_6_12920001 chr3L_12920001 RAL-45 742 chr3L 12980839 12980869 chr3L 12980931 12980961 8 92 0.0 2.0 1.0 4.0 122 chr3L 12980839 intergenic not near genes chr3L 12980900 intergenic not near genes chr3L 12980961 intergenic not near genes chr3L_8_12980001 chr3L_12980001 RAL-45 743 chr3L 13007695 13007727 chr3L 13007774 13007806 6 78 1.5 2.5 2.0 2.0 111 chr3L 13007695 exon CG11263 + chr3L 13007750 3` UTR CG11263 + chr3L 13007806 3` UTR CG11263 + chr3L_6_13005001 chr3L_13005001 RAL-45 744 chr3L 13056458 13056735 chr3L 13056616 13056819 4 103 0.0 0.0 0.0 4.0 361 chr3L 13056458 intergenic not near genes chr3L 13056638 intergenic not near genes chr3L 13056819 intergenic not near genes chr3L_4_13055001 chr3L_13055001 RAL-45 745 chr3L 13267285 13267308 chr3L 13267398 13267421 10 112 4.0 2.0 3.0 2.5 136 chr3L 13267285 intron caps + chr3L 13267353 intron caps + chr3L 13267421 intron caps + chr3L_10_13265001 chr3L_13265001 RAL-45 746 chr3L 13329984 13329993 chr3L 13330066 13330080 4 88 3.5 3.0 3.2 1.0 96 chr3L 13329984 intergenic CG14113 + chr3L 13330032 intergenic CG14113 + chr3L 13330080 intergenic CG14113 + chr3L_4_13330001 chr3L_13330001 RAL-45 747 chr3L 13375424 13375433 chr3L 13375534 13375541 4 110 3.5 3.0 3.2 1.0 117 chr3L 13375424 intergenic not near genes chr3L 13375482 intergenic not near genes chr3L 13375541 intergenic not near genes chr3L_4_13375001 chr3L_13375001 RAL-45 748 chr3L 13400529 13400541 chr3L 13400605 13400616 4 74 1.0 0.0 0.5 2.7 87 chr3L 13400529 intron sens - chr3L 13400572 intron sens - chr3L 13400616 intron sens - chr3L_4_13400001 chr3L_13400001 RAL-45 749 chr3L 13525155 13525187 chr3L 13532951 13532955 roo 7 7792 1.0 3.0 2.0 2.3 7800 chr3L 13525155 intergenic not near genes chr3L 13529055 intergenic not near genes chr3L 13532955 intergenic not near genes chr3L_7_13525001 chr3L_13525001 RAL-45 750 chr3L 13626689 13626717 chr3L 13626773 13626801 5 84 4.5 1.5 3.0 1.2 112 chr3L 13626689 intron bru-3 - chr3L 13626745 intron bru-3 - chr3L 13626801 intron bru-3 - chr3L_5_13625001 chr3L_13625001 RAL-45 751 chr3L 13633416 13633441 chr3L 13633767 13633795 9 352 1.5 3.5 2.5 2.6 379 chr3L 13633416 intron bru-3 - chr3L 13633606 intron bru-3 - chr3L 13633795 intron bru-3 - chr3L_9_13630001 chr3L_13630001 RAL-45 752 chr3L 13648885 13648920 chr3L 13648975 13649010 10 90 1.0 2.0 1.5 4.0 125 chr3L 13648885 intron bru-3 - chr3L 13648948 intron bru-3 - chr3L 13649010 intron bru-3 - chr3L_10_13645001 chr3L_13645001 RAL-45 753 chr3L 13659514 13659544 chr3L 13659593 13659620 4 78 2.5 0.5 1.5 1.6 106 chr3L 13659514 intron bru-3 - chr3L 13659567 intron bru-3 - chr3L 13659620 intron bru-3 - chr3L_4_13655001 chr3L_13655001 RAL-45 754 chr3L 13677537 13677559 chr3L 13677613 13677633 4 76 0.5 1.0 0.8 2.2 96 chr3L 13677537 intron bru-3 - chr3L 13677585 intron bru-3 - chr3L 13677633 intron bru-3 - chr3L_4_13675001 chr3L_13675001 RAL-45 755 chr3L 13774634 13774668 chr3L 13774720 13774754 5 86 2.5 2.5 2.5 1.4 120 chr3L 13774634 intron bru-3 - chr3L 13774694 intron bru-3 - chr3L 13774754 intron bru-3 - chr3L_5_13770001 chr3L_13770001 RAL-45 756 chr3L 13871737 13871754 chr3L 13871814 13871832 4 78 0.5 1.0 0.8 2.2 95 chr3L 13871737 3` UTR dysc - chr3L 13871784 3` UTR dysc - chr3L 13871832 3` UTR dysc - chr3L_4_13870001 chr3L_13870001 RAL-45 757 chr3L 14063051 14063089 chr3L 14063321 14063359 5 270 1.0 0.5 0.8 2.8 308 chr3L 14063051 intron CG32138 + chr3L 14063205 intron CG32138 + chr3L 14063359 intron CG32138 + chr3L_5_14060001 chr3L_14060001 RAL-45 758 chr3L 14245568 14245591 chr3L 14245662 14245684 1360 10 94 8.5 2.5 5.5 1.5 116 chr3L 14245568 3` UTR CR44561 - chr3L 14245626 3` UTR CR44561 - chr3L 14245684 3` UTR CR44561 - chr3L_10_14245001 chr3L_14245001 RAL-45 759 chr3L 14282589 14282600 chr3L 14282669 14282680 5 80 5.0 4.5 4.8 0.9 91 chr3L 14282589 intron fz + chr3L 14282634 intron fz + chr3L 14282680 intron fz + chr3L_5_14280001 chr3L_14280001 RAL-45 760 chr3L 14295993 14296002 chr3L 14296479 14296484 roo 5 485 7.5 4.0 5.8 0.7 491 chr3L 14295993 intron fz + chr3L 14296238 intron fz + chr3L 14296484 intron fz + chr3L_5_14295001 chr3L_14295001 RAL-45 761 chr3L 14312023 14312055 chr3L 14316834 14316869 X-element 6 4812 2.0 2.5 2.2 1.9 4846 chr3L 14312023 exon fz + chr3L 14314446 intron fz + chr3L 14316869 intron fz + chr3L_6_14310001 chr3L_14310001 RAL-45 762 chr3L 14356524 14356553 chr3L 14356604 14356633 8 80 2.0 1.5 1.8 2.9 109 chr3L 14356524 intron fz + chr3L 14356578 intron fz + chr3L 14356633 intron fz + chr3L_8_14355001 chr3L_14355001 RAL-45 763 chr3L 14468447 14468473 chr3L 14473653 14473679 copia 7 5203 2.0 2.0 2.0 2.3 5232 chr3L 14468447 intron bbg - chr3L 14471063 intron bbg - chr3L 14473679 intron bbg - chr3L_7_14470001 chr3L_14470001 RAL-45 764 chr3L 14486019 14486037 chr3L 14486100 14486118 5 81 2.0 0.5 1.2 2.3 99 chr3L 14486019 intron bbg - chr3L 14486068 intron bbg - chr3L 14486118 intron bbg - chr3L_5_14485001 chr3L_14485001 RAL-45 765 chr3L 14633792 14633819 chr3L 14633888 14633915 4 96 0.5 0.5 0.5 2.7 123 chr3L 14633792 intron dlp + chr3L 14633854 intron dlp + chr3L 14633915 intron dlp + chr3L_4_14630001 chr3L_14630001 RAL-45 766 chr3L 14647706 14647735 chr3L 14648532 14648559 4 826 1.0 4.0 2.5 1.1 853 chr3L 14647706 intron dlp + chr3L 14648132 intron dlp + chr3L 14648559 intron dlp + chr3L_4_14645001 chr3L_14645001 RAL-45 767 chr3L 14721188 14721208 chr3L 14723026 14723051 Rt1c 6 1840 5.0 2.5 3.8 1.2 1863 chr3L 14721188 intron ome + chr3L 14722120 intron ome + chr3L 14723051 intron ome + chr3L_6_14720001 chr3L_14720001 RAL-45 768 chr3L 14870053 14870073 chr3L 14870129 14870149 6 76 2.0 2.0 2.0 2.0 96 chr3L 14870053 intron CG17839 + chr3L 14870101 intron CG17839 + chr3L 14870149 intron CG17839 + chr3L_6_14870001 chr3L_14870001 RAL-45 769 chr3L 14893662 14893683 chr3L 14893747 14893768 7 85 3.5 4.0 3.8 1.5 106 chr3L 14893662 intergenic CG34245 - chr3L 14893715 intergenic CG34245 - chr3L 14893768 3` UTR CG34245 - chr3L_7_14890001 chr3L_14890001 RAL-45 770 chr3L 14913904 14913933 chr3L 14913981 14914010 7 75 1.0 0.5 0.8 3.9 106 chr3L 14913904 intron DCX-EMAP + chr3L 14913957 intron DCX-EMAP + chr3L 14914010 intron DCX-EMAP + chr3L_7_14910001 chr3L_14910001 RAL-45 771 chr3L 14947890 14947919 chr3L 14947973 14948001 12 82 2.0 1.5 1.8 4.3 111 chr3L 14947890 intergenic not near genes chr3L 14947946 intergenic not near genes chr3L 14948001 intergenic not near genes chr3L_12_14945001 chr3L_14945001 RAL-45 772 chr3L 15085061 15085083 chr3L 15086217 15086248 1360 5 1164 1.5 3.0 2.2 1.6 1187 chr3L 15085061 intron cp309 - chr3L 15085654 intron cp309 - chr3L 15086248 intron cp309 - chr3L_5_15085001 chr3L_15085001 RAL-45 773 chr3L 15384958 15384985 chr3L 15385086 15385113 9 128 1.0 0.0 0.5 6.0 155 chr3L 15384958 intergenic not near genes chr3L 15385036 intergenic not near genes chr3L 15385113 intergenic not near genes chr3L_9_15385001 chr3L_15385001 RAL-45 774 chr3L 15406019 15406050 chr3L 15406101 15406133 4 82 0.0 1.0 0.5 2.7 114 chr3L 15406019 intergenic not near genes chr3L 15406076 intergenic not near genes chr3L 15406133 intergenic not near genes chr3L_4_15405001 chr3L_15405001 RAL-45 775 chr3L 15444649 15444680 chr3L 15444743 15444774 18 90 1.5 3.0 2.2 5.6 125 chr3L 15444649 intergenic not near genes chr3L 15444712 intergenic not near genes chr3L 15444774 intergenic not near genes chr3L_18_15440001 chr3L_15440001 RAL-45 776 chr3L 15463459 15463484 chr3L 15463549 15463574 4 90 2.0 4.0 3.0 1.0 115 chr3L 15463459 intergenic not near genes chr3L 15463516 intergenic not near genes chr3L 15463574 intergenic not near genes chr3L_4_15460001 chr3L_15460001 RAL-45 777 chr3L 15466046 15466134 chr3L 15466127 15466230 5 90 0.0 0.0 0.0 5.0 184 chr3L 15466046 intergenic not near genes chr3L 15466138 intergenic not near genes chr3L 15466230 intergenic not near genes chr3L_5_15465001 chr3L_15465001 RAL-45 778 chr3L 15615927 15615960 chr3L 15616023 15616056 7 96 2.0 1.5 1.8 2.5 129 chr3L 15615927 intron comm3 - chr3L 15615992 intron comm3 - chr3L 15616056 intron comm3 - chr3L_7_15615001 chr3L_15615001 RAL-45 779 chr3L 15643593 15643623 chr3L 15643880 15643910 4 287 0.5 5.5 3.0 1.0 317 chr3L 15643593 intron comm3 - chr3L 15643752 intron comm3 - chr3L 15643910 intron comm3 - chr3L_4_15640001 chr3L_15640001 RAL-45 780 chr3L 15742961 15742987 chr3L 15743121 15743147 4 159 2.5 0.0 1.2 1.8 186 chr3L 15742961 intergenic not near genes chr3L 15743054 intergenic not near genes chr3L 15743147 intergenic not near genes chr3L_4_15740001 chr3L_15740001 RAL-45 781 chr3L 15748455 15748476 chr3L 15748540 15748561 6 83 7.5 3.5 5.5 0.9 106 chr3L 15748455 5` UTR CR45240 + chr3L 15748508 5` UTR CR45240 + chr3L 15748561 5` UTR CR45240 + chr3L_6_15745001 chr3L_15745001 RAL-45 782 chr3L 15748478 15748487 chr3L 15748537 15748569 5 66 5.5 2.0 3.8 1.0 91 chr3L 15748478 5` UTR CR45240 + chr3L 15748524 5` UTR CR45240 + chr3L 15748569 5` UTR CR45240 + chr3L_5_15745001 chr3L_15745001 RAL-45 783 chr3L 15809166 15809198 chr3L 15809250 15809282 7 83 0.5 1.0 0.8 3.9 116 chr3L 15809166 intergenic CG6244 +,CG13445 + chr3L 15809224 intergenic CG13445 +,CG6244 + chr3L 15809282 intergenic CG13445 +,CG6244 + chr3L_7_15805001 chr3L_15805001 RAL-45 784 chr3L 15832252 15832286 chr3L 15832333 15832362 11 79 1.0 3.5 2.2 3.4 110 chr3L 15832252 intergenic CG12713 +,dbo + chr3L 15832307 intergenic CG12713 +,dbo + chr3L 15832362 intergenic CG12713 +,dbo + chr3L_11_15830001 chr3L_15830001 RAL-45 785 chr3L 15899240 15899248 chr3L 15899791 15899815 jockey 4 557 1.0 2.5 1.8 1.4 575 chr3L 15899240 intergenic pHCl - chr3L 15899528 intergenic pHCl - chr3L 15899815 intergenic sff - chr3L_4_15895001 chr3L_15895001 RAL-45 786 chr3L 15998418 15998439 chr3L 16002596 16002620 5 4179 20.0 11.5 15.8 0.3 4202 chr3L 15998418 intron CG5830 - chr3L 16000519 intron CG5830 - chr3L 16002620 intron CG5830 - chr3L_5_16000001 chr3L_16000001 RAL-45 787 chr3L 16037165 16037169 chr3L 16037246 16037248 4 80 2.5 1.0 1.8 1.4 83 chr3L 16037165 3` UTR CG5895 + chr3L 16037206 3` UTR CG5895 + chr3L 16037248 intergenic CG5895 + chr3L_4_16035001 chr3L_16035001 RAL-45 788 chr3L 16154678 16154707 chr3L 16154769 16154798 12 90 3.0 2.0 2.5 3.4 120 chr3L 16154678 intron CG5151 - chr3L 16154738 intron CG5151 - chr3L 16154798 intron CG5151 - chr3L_12_16150001 chr3L_16150001 RAL-45 789 chr3L 16162602 16162629 chr3L 16162686 16162713 8 84 2.5 1.5 2.0 2.7 111 chr3L 16162602 intron CG5151 - chr3L 16162658 intron CG5151 - chr3L 16162713 intron CG5151 - chr3L_8_16160001 chr3L_16160001 RAL-45 790 chr3L 16180352 16180369 chr3L 16180454 16180468 7 101 2.5 2.5 2.5 2.0 116 chr3L 16180352 intergenic not near genes chr3L 16180410 intergenic not near genes chr3L 16180468 intergenic not near genes chr3L_7_16180001 chr3L_16180001 RAL-45 791 chr3L 16304866 16304893 chr3L 16304944 16304968 9 77 1.5 1.0 1.2 4.1 102 chr3L 16304866 intergenic CG43249 +,CG13043 - chr3L 16304917 intergenic CG43249 +,CG13043 - chr3L 16304968 intergenic CG13043 -,CG43249 + chr3L_9_16300001 chr3L_16300001 RAL-45 792 chr3L 16322823 16322858 chr3L 16322913 16322946 10 89 0.0 3.0 1.5 4.0 123 chr3L 16322823 intergenic not near genes chr3L 16322884 intergenic not near genes chr3L 16322946 intergenic not near genes chr3L_10_16320001 chr3L_16320001 RAL-45 793 chr3L 16443863 16443878 chr3L 16446203 16446216 Doc 7 2340 0.0 3.0 1.5 2.8 2353 chr3L 16443863 intron,intron CG33158 +,dsx-c73A - chr3L 16445040 intron,intron CG33158 +,dsx-c73A - chr3L 16446216 intron,intron CG33158 +,dsx-c73A - chr3L_7_16445001 chr3L_16445001 RAL-45 794 chr3L 16493989 16494011 chr3L 16494506 16494528 jockey 4 517 2.5 3.5 3.0 1.0 539 chr3L 16493989 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494258 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494528 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_4_16490001 chr3L_16490001 RAL-45 795 chr3L 16550106 16550137 chr3L 16550269 16550300 6 162 0.0 2.5 1.2 2.7 194 chr3L 16550106 intergenic not near genes chr3L 16550203 intergenic not near genes chr3L 16550300 intergenic not near genes chr3L_6_16550001 chr3L_16550001 RAL-45 796 chr3L 16786974 16787001 chr3L 16787050 16787077 8 76 0.0 1.0 0.5 5.3 103 chr3L 16786974 intergenic Int6 - chr3L 16787026 intergenic Int6 - chr3L 16787077 intergenic Int6 -,CG9674 - chr3L_8_16785001 chr3L_16785001 RAL-45 797 chr3L 16817876 16817889 chr3L 16818016 16818028 8 139 6.0 4.0 5.0 1.3 152 chr3L 16817876 intron,intron nudC +,CG13024 - chr3L 16817952 intron,intron nudC +,CG13024 - chr3L 16818028 intron,intron nudC +,CG13024 - chr3L_8_16815001 chr3L_16815001 RAL-45 798 chr3L 16861028 16861049 chr3L 16861130 16861146 5 101 3.5 4.0 3.8 1.0 118 chr3L 16861028 intron,exon Rh4 -,CG13029 + chr3L 16861087 intron,intron Rh4 -,CG13029 + chr3L 16861146 intron,intron Rh4 -,CG13029 + chr3L_5_16860001 chr3L_16860001 RAL-45 799 chr3L 16945729 16945759 chr3L 16954882 16954912 roo 10 9152 5.0 0.5 2.8 2.6 9183 chr3L 16945729 exon Obp73a + chr3L 16950320 intergenic not near genes chr3L 16954912 5` UTR Nc73EF + chr3L_10_16950001 chr3L_16950001 RAL-45 800 chr3L 17026795 17026822 chr3L 17026876 17026903 7 80 1.5 3.0 2.2 2.2 108 chr3L 17026795 exon Fit2 + chr3L 17026849 3` UTR Fit2 + chr3L 17026903 3` UTR Fit2 + chr3L_7_17025001 chr3L_17025001 RAL-45 801 chr3L 17107357 17107378 chr3L 17107446 17107464 5 85 4.5 4.0 4.2 1.0 107 chr3L 17107357 intron Rbp6 - chr3L 17107410 intron Rbp6 - chr3L 17107464 intron Rbp6 - chr3L_5_17105001 chr3L_17105001 RAL-45 802 chr3L 17149170 17149185 chr3L 17149250 17149266 4 81 4.5 0.0 2.2 1.2 96 chr3L 17149170 intron Rbp6 - chr3L 17149218 intron Rbp6 - chr3L 17149266 intron Rbp6 - chr3L_4_17145001 chr3L_17145001 RAL-45 803 chr3L 17222246 17222269 chr3L 17222324 17222346 7 76 4.5 0.5 2.5 2.0 100 chr3L 17222246 intron Rbp6 - chr3L 17222296 intron Rbp6 - chr3L 17222346 intron Rbp6 - chr3L_7_17220001 chr3L_17220001 RAL-45 804 chr3L 17309085 17309090 chr3L 17309157 17309158 5 78 10.0 2.5 6.2 0.7 73 chr3L 17309085 intergenic not near genes chr3L 17309122 intergenic not near genes chr3L 17309158 intergenic not near genes chr3L_5_17305001 chr3L_17305001 RAL-45 805 chr3L 17510744 17510765 chr3L 17510828 17510849 5 84 3.5 2.0 2.8 1.3 105 chr3L 17510744 exon Oatp74D + chr3L 17510796 intron Oatp74D + chr3L 17510849 intron Oatp74D + chr3L_5_17510001 chr3L_17510001 RAL-45 806 chr3L 17516980 17517013 chr3L 17524536 17524571 412 9 7557 1.5 3.5 2.5 2.6 7591 chr3L 17516980 intron CG7564 + chr3L 17520776 intron CG7564 + chr3L 17524571 3` UTR CG7564 + chr3L_9_17520001 chr3L_17520001 RAL-45 807 chr3L 17594262 17594271 chr3L 17594341 17594352 5 80 0.5 4.0 2.2 1.6 90 chr3L 17594262 intron Eip74EF - chr3L 17594307 intron Eip74EF - chr3L 17594352 intron Eip74EF - chr3L_5_17590001 chr3L_17590001 RAL-45 808 chr3L 17659734 17659750 chr3L 17659811 17659827 4 77 0.0 1.0 0.5 2.7 93 chr3L 17659734 intergenic Crtc - chr3L 17659780 intergenic Crtc - chr3L 17659827 3` UTR Crtc - chr3L_4_17655001 chr3L_17655001 RAL-45 809 chr3L 17946333 17946352 chr3L 17946410 17946430 6 78 1.5 2.0 1.8 2.1 97 chr3L 17946333 intergenic CG43174 + chr3L 17946382 intergenic CG43174 + chr3L 17946430 intergenic CG43174 + chr3L_6_17945001 chr3L_17945001 RAL-45 810 chr3L 17957056 17957084 chr3L 17957143 17957174 10 90 3.5 1.5 2.5 2.9 118 chr3L 17957056 intron Eip75B - chr3L 17957115 intron Eip75B - chr3L 17957174 intron Eip75B - chr3L_10_17955001 chr3L_17955001 RAL-45 811 chr3L 17957421 17957446 chr3L 17957502 17957527 8 81 3.5 3.5 3.5 1.8 106 chr3L 17957421 intron Eip75B - chr3L 17957474 intron Eip75B - chr3L 17957527 intron Eip75B - chr3L_8_17955001 chr3L_17955001 RAL-45 812 chr3L 18021354 18021382 chr3L 18021446 18021474 8 92 5.0 1.0 3.0 2.0 120 chr3L 18021354 intron Eip75B - chr3L 18021414 intron Eip75B - chr3L 18021474 intron Eip75B - chr3L_8_18020001 chr3L_18020001 RAL-45 813 chr3L 18077946 18077956 chr3L 18078043 18078050 7 95 11.5 2.5 7.0 0.9 104 chr3L 18077946 5` UTR CR45392 + chr3L 18077998 5` UTR CR45392 + chr3L 18078050 5` UTR CR45392 + chr3L_7_18075001 chr3L_18075001 RAL-45 814 chr3L 18138228 18138255 chr3L 18138314 18138340 6 85 1.5 0.0 0.8 3.3 112 chr3L 18138228 intergenic not near genes chr3L 18138284 intergenic not near genes chr3L 18138340 intergenic not near genes chr3L_6_18135001 chr3L_18135001 RAL-45 815 chr3L 18248960 18248979 chr3L 18249058 18249077 4 98 1.0 3.5 2.2 1.2 117 chr3L 18248960 intergenic not near genes chr3L 18249018 intergenic not near genes chr3L 18249077 intergenic not near genes chr3L_4_18245001 chr3L_18245001 RAL-45 816 chr3L 18321086 18321102 chr3L 18321172 18321186 4 86 2.5 0.5 1.5 1.6 100 chr3L 18321086 intergenic not near genes chr3L 18321136 intergenic not near genes chr3L 18321186 intergenic not near genes chr3L_4_18320001 chr3L_18320001 RAL-45 817 chr3L 18418036 18418063 chr3L 18420040 18420078 6 2006 5.5 0.5 3.0 1.5 2042 chr3L 18418036 intergenic not near genes chr3L 18419057 intergenic not near genes chr3L 18420078 intergenic not near genes chr3L_6_18415001 chr3L_18415001 RAL-45 818 chr3L 18457352 18457379 chr3L 18457473 18457485 14 119 2.5 1.0 1.8 5.0 133 chr3L 18457352 3` UTR CR44671 - chr3L 18457418 3` UTR CR44671 - chr3L 18457485 3` UTR CR44671 - chr3L_14_18455001 chr3L_18455001 RAL-45 819 chr3L 18546702 18546729 chr3L 18546796 18546823 14 93 2.0 3.0 2.5 4.0 121 chr3L 18546702 intergenic not near genes chr3L 18546762 intergenic not near genes chr3L 18546823 intergenic not near genes chr3L_14_18545001 chr3L_18545001 RAL-45 820 chr3L 18656182 18656218 chr3L 18656267 18656303 11 84 4.0 3.0 3.5 2.4 121 chr3L 18656182 intron MYPT-75D + chr3L 18656242 intron MYPT-75D + chr3L 18656303 intron MYPT-75D + chr3L_11_18655001 chr3L_18655001 RAL-45 821 chr3L 18705095 18705127 chr3L 18705176 18705207 6 82 4.5 2.0 3.2 1.4 112 chr3L 18705095 intergenic not near genes chr3L 18705151 intergenic not near genes chr3L 18705207 intergenic not near genes chr3L_6_18705001 chr3L_18705001 RAL-45 822 chr3L 18721773 18721802 chr3L 18721864 18721893 7 88 3.5 1.0 2.2 2.2 120 chr3L 18721773 intergenic CG12477 - chr3L 18721833 intergenic CG12477 - chr3L 18721893 3` UTR CG12477 - chr3L_7_18720001 chr3L_18720001 RAL-45 823 chr3L 18772411 18772442 chr3L 18781092 18781123 roo 11 8681 1.5 4.5 3.0 2.8 8712 chr3L 18772411 intron ftz-f1 - chr3L 18776767 intron ftz-f1 - chr3L 18781123 intron ftz-f1 - chr3L_11_18775001 chr3L_18775001 RAL-45 824 chr3L 18896763 18896788 chr3L 18896897 18896923 7 133 3.5 1.0 2.2 2.2 160 chr3L 18896763 intron CG3902 - chr3L 18896843 intron CG3902 - chr3L 18896923 intron CG3902 - chr3L_7_18895001 chr3L_18895001 RAL-45 825 chr3L 18929963 18929984 chr3L 18930047 18930058 5 82 0.5 2.5 1.5 2.0 95 chr3L 18929963 intron CG32204 - chr3L 18930010 intron CG32204 - chr3L 18930058 intron CG32204 - chr3L_5_18930001 chr3L_18930001 RAL-45 826 chr3L 18969619 18969631 chr3L 18969690 18969727 4 86 4.0 2.0 3.0 1.0 108 chr3L 18969619 intergenic not near genes chr3L 18969673 intergenic not near genes chr3L 18969727 intergenic not near genes chr3L_4_18965001 chr3L_18965001 RAL-45 827 chr3L 18972391 18972408 chr3L 18972467 18972475 9 75 6.5 9.5 8.0 1.0 84 chr3L 18972391 intergenic not near genes chr3L 18972433 intergenic not near genes chr3L 18972475 intergenic not near genes chr3L_9_18970001 chr3L_18970001 RAL-45 828 chr3L 18972413 18972419 chr3L 18972466 18972495 6 72 4.0 9.0 6.5 0.8 82 chr3L 18972413 intergenic not near genes chr3L 18972454 intergenic not near genes chr3L 18972495 intergenic not near genes chr3L_6_18970001 chr3L_18970001 RAL-45 829 chr3L 19115633 19115669 chr3L 19115813 19115849 BS 5 180 8.5 0.5 4.5 0.9 216 chr3L 19115633 intron CG14082 - chr3L 19115741 intron CG14082 - chr3L 19115849 intron CG14082 - chr3L_5_19115001 chr3L_19115001 RAL-45 830 chr3L 19117045 19117073 chr3L 19124492 19124520 mdg1 12 7446 5.0 7.5 6.2 1.7 7475 chr3L 19117045 intron CG14082 - chr3L 19120782 intron CG14082 - chr3L 19124520 intron CG14082 - chr3L_12_19120001 chr3L_19120001 RAL-45 831 chr3L 19186943 19186973 chr3L 19187039 19187069 4 96 1.5 0.5 1.0 2.0 126 chr3L 19186943 intron fz2 - chr3L 19187006 intron fz2 - chr3L 19187069 intron fz2 - chr3L_4_19185001 chr3L_19185001 RAL-45 832 chr3L 19208059 19208087 chr3L 19209432 19209452 Doc 11 1373 0.5 5.5 3.0 2.8 1393 chr3L 19208059 intron fz2 - chr3L 19208756 intron fz2 - chr3L 19209452 intron fz2 - chr3L_11_19205001 chr3L_19205001 RAL-45 833 chr3L 19226055 19226081 chr3L 19226153 19226178 6 98 2.0 2.0 2.0 2.0 123 chr3L 19226055 intron fz2 - chr3L 19226116 intron fz2 - chr3L 19226178 intron fz2 - chr3L_6_19225001 chr3L_19225001 RAL-45 834 chr3L 19245617 19245650 chr3L 19245693 19245726 8 76 1.5 2.0 1.8 2.9 109 chr3L 19245617 intergenic not near genes chr3L 19245672 intergenic not near genes chr3L 19245726 intergenic not near genes chr3L_8_19245001 chr3L_19245001 RAL-45 835 chr3L 19269822 19269844 chr3L 19270026 19270045 10 202 2.5 4.5 3.5 2.2 223 chr3L 19269822 intron,exon CG14085 +,CG14088 - chr3L 19269934 intron,exon CG14085 +,CG14088 - chr3L 19270045 intron,exon CG14085 +,CG14088 - chr3L_10_19265001 chr3L_19265001 RAL-45 836 chr3L 19426748 19426777 chr3L 19426826 19426855 9 75 3.5 5.0 4.2 1.7 107 chr3L 19426748 intergenic not near genes chr3L 19426802 intergenic not near genes chr3L 19426855 intergenic not near genes chr3L_9_19425001 chr3L_19425001 RAL-45 837 chr3L 19846602 19846637 chr3L 19846700 19846735 7 98 1.0 1.5 1.2 3.2 133 chr3L 19846602 intron Papss + chr3L 19846668 intron Papss + chr3L 19846735 intron Papss + chr3L_7_19845001 chr3L_19845001 RAL-45 838 chr3L 20143083 20143107 chr3L 20143163 20143183 7 79 2.0 1.0 1.5 2.8 100 chr3L 20143083 intergenic not near genes chr3L 20143133 intergenic not near genes chr3L 20143183 intergenic not near genes chr3L_7_20140001 chr3L_20140001 RAL-45 839 chr3L 20148282 20148310 chr3L 20148372 20148400 8 90 5.0 0.5 2.8 2.1 118 chr3L 20148282 intergenic not near genes chr3L 20148341 intergenic not near genes chr3L 20148400 intergenic not near genes chr3L_8_20145001 chr3L_20145001 RAL-45 840 chr3L 20256637 20256664 chr3L 20256747 20256774 5 110 4.0 0.5 2.2 1.6 137 chr3L 20256637 exon rdgC + chr3L 20256706 intron rdgC + chr3L 20256774 intron rdgC + chr3L_5_20255001 chr3L_20255001 RAL-45 841 chr3L 20257344 20257360 chr3L 20258460 20258476 pogo 4 1116 1.5 4.0 2.8 1.1 1132 chr3L 20257344 intron rdgC + chr3L 20257910 intron rdgC + chr3L 20258476 intron rdgC + chr3L_4_20255001 chr3L_20255001 RAL-45 842 chr3L 20386938 20386958 chr3L 20387040 20387060 4 102 1.0 2.0 1.5 1.6 122 chr3L 20386938 intron fbl + chr3L 20386999 intron fbl + chr3L 20387060 intron fbl + chr3L_4_20385001 chr3L_20385001 RAL-45 843 chr3L 20590070 20590096 chr3L 20590604 20590626 412 5 536 3.5 5.0 4.2 1.0 556 chr3L 20590070 intergenic not near genes chr3L 20590348 intergenic not near genes chr3L 20590626 intergenic not near genes chr3L_5_20590001 chr3L_20590001 RAL-45 844 chr3L 21014915 21014947 chr3L 21023394 21023398 Tirant 12 8477 2.0 3.5 2.8 3.2 8483 chr3L 21014915 intron skd - chr3L 21019156 intron skd - chr3L 21023398 intron skd - chr3L_12_21015001 chr3L_21015001 RAL-45 845 chr3L 21100214 21100234 chr3L 21100317 21100338 4 104 2.5 6.5 4.5 0.7 124 chr3L 21100214 intron ko - chr3L 21100276 intron ko - chr3L 21100338 intron ko - chr3L_4_21100001 chr3L_21100001 RAL-45 846 chr3L 21151864 21151896 chr3L 21156948 21156980 flea 6 5084 2.5 0.5 1.5 2.4 5116 chr3L 21151864 intron Ac78C - chr3L 21154422 intron Ac78C - chr3L 21156980 intron Ac78C - chr3L_6_21150001 chr3L_21150001 RAL-45 847 chr3L 21243747 21243762 chr3L 21251310 21251323 412 5 7562 3.0 5.0 4.0 1.0 7576 chr3L 21243747 intron Eip78C + chr3L 21247535 intron Eip78C + chr3L 21251323 intron Eip78C + chr3L_5_21245001 chr3L_21245001 RAL-45 848 chr3L 21306145 21306158 chr3L 21315304 21315317 roo 4 9159 2.5 0.5 1.5 1.6 9172 chr3L 21306145 3` UTR,3` UTR CG7632 +,Pc - chr3L 21310731 intron Pc - chr3L 21315317 3` UTR Pc - chr3L_4_21310001 chr3L_21310001 RAL-45 849 chr3L 21407008 21407026 chr3L 21407074 21407105 9 77 1.5 3.5 2.5 2.6 97 chr3L 21407008 intron rgn + chr3L 21407056 intron rgn + chr3L 21407105 intron rgn + chr3L_9_21405001 chr3L_21405001 RAL-45 850 chr3L 21415454 21415482 chr3L 21415532 21415551 8 77 3.0 2.5 2.8 2.1 97 chr3L 21415454 intron rgn + chr3L 21415502 intron rgn + chr3L 21415551 intron rgn + chr3L_8_21415001 chr3L_21415001 RAL-45 851 chr3L 21498837 21498863 chr3L 21500471 21500499 1360 9 1635 8.0 3.0 5.5 1.4 1662 chr3L 21498837 intron Glg1 - chr3L 21499668 intron Glg1 - chr3L 21500499 intron Glg1 - chr3L_9_21495001 chr3L_21495001 RAL-45 852 chr3L 21689436 21689453 chr3L 21689518 21689534 5 80 4.0 2.0 3.0 1.2 98 chr3L 21689436 intergenic not near genes chr3L 21689485 intergenic not near genes chr3L 21689534 intergenic not near genes chr3L_5_21685001 chr3L_21685001 RAL-45 853 chr3L 21749313 21749350 chr3L 21754472 21754476 Doc 8 5148 0.0 2.0 1.0 4.0 5163 chr3L 21749313 intron Syn1 - chr3L 21751894 intron Syn1 - chr3L 21754476 intron Syn1 - chr3L_8_21750001 chr3L_21750001 RAL-45 854 chr3L 21767037 21767068 chr3L 21767118 21767147 4 80 0.0 2.5 1.2 1.8 110 chr3L 21767037 intron Syn1 - chr3L 21767092 intron Syn1 - chr3L 21767147 intron Syn1 - chr3L_4_21765001 chr3L_21765001 RAL-45 855 chr3L 21776677 21776701 chr3L 21776764 21776788 4 86 0.5 1.0 0.8 2.2 111 chr3L 21776677 intron,intron CG42689 +,CG42552 + chr3L 21776732 intron,intron CG42689 +,CG42552 + chr3L 21776788 intron,intron CG42689 +,CG42552 + chr3L_4_21775001 chr3L_21775001 RAL-45 856 chr3L 21881607 21881633 chr3L 21885036 21885062 4 3429 22.0 18.0 20.0 0.2 3455 chr3L 21881607 intron mub + chr3L 21883334 intron mub + chr3L 21885062 intron,intron mub +,CR43878 - chr3L_4_21880001 chr3L_21880001 RAL-45 857 chr3L 21890013 21890043 chr3L 21890510 21890540 6 497 2.5 3.5 3.0 1.5 527 chr3L 21890013 intron mub + chr3L 21890276 intron mub + chr3L 21890540 intron mub + chr3L_6_21890001 chr3L_21890001 RAL-45 858 chr3L 21901025 21901045 chr3L 21901117 21901138 7 93 6.0 4.0 5.0 1.2 113 chr3L 21901025 intron mub + chr3L 21901082 intron mub + chr3L 21901138 intron mub + chr3L_7_21900001 chr3L_21900001 RAL-45 859 chr3L 22034614 22034634 chr3L 22034716 22034736 4 102 0.0 2.5 1.2 1.8 122 chr3L 22034614 intergenic Oct-TyrR + chr3L 22034675 intergenic Oct-TyrR + chr3L 22034736 intergenic Oct-TyrR + chr3L_4_22030001 chr3L_22030001 RAL-45 860 chr3L 22099674 22099709 chr3L 22105860 22105895 3S18 8 6186 1.5 0.5 1.0 4.0 6221 chr3L 22099674 intergenic not near genes chr3L 22102784 intergenic not near genes chr3L 22105895 intergenic not near genes chr3L_8_22100001 chr3L_22100001 RAL-45 861 chr3L 22122169 22122200 chr3L 22122513 22122542 7 343 2.5 3.0 2.8 1.8 373 chr3L 22122169 5` UTR CR45236 + chr3L 22122356 intergenic CR45236 +,CR45235 + chr3L 22122542 intergenic CR45235 +,CR45236 + chr3L_7_22120001 chr3L_22120001 RAL-45 862 chr3L 22137529 22137548 chr3L 22137606 22137625 7 77 0.0 2.0 1.0 3.5 96 chr3L 22137529 intron olf413 + chr3L 22137577 intron olf413 + chr3L 22137625 intron olf413 + chr3L_7_22135001 chr3L_22135001 RAL-45 863 chr3L 22241298 22241322 chr3L 22241379 22241404 7 80 2.5 5.0 3.8 1.5 106 chr3L 22241298 intron olf413 + chr3L 22241351 intron olf413 + chr3L 22241404 intron olf413 + chr3L_7_22240001 chr3L_22240001 RAL-45 864 chr3L 22251000 22251016 chr3L 22251095 22251111 4 95 11.5 4.0 7.8 0.5 111 chr3L 22251000 intergenic not near genes chr3L 22251056 intergenic not near genes chr3L 22251111 intergenic not near genes chr3L_4_22250001 chr3L_22250001 RAL-45 865 chr3L 22335485 22335510 chr3L 22335611 22335634 9 125 6.0 7.0 6.5 1.2 149 chr3L 22335485 intron Ten-m - chr3L 22335560 intron Ten-m - chr3L 22335634 intron Ten-m - chr3L_9_22335001 chr3L_22335001 RAL-45 866 chr3L 22447197 22447226 chr3L 22447288 22447317 7 91 5.0 1.5 3.2 1.7 120 chr3L 22447197 intergenic not near genes chr3L 22447257 intergenic not near genes chr3L 22447317 intergenic not near genes chr3L_7_22445001 chr3L_22445001 RAL-45 867 chr3L 22555788 22555803 chr3L 22563239 22563272 blood 4 7458 1.0 1.5 1.2 1.8 7484 chr3L 22555788 intergenic not near genes chr3L 22559530 intergenic not near genes chr3L 22563272 intergenic not near genes chr3L_4_22555001 chr3L_22555001 RAL-45 868 chr3L 22570428 22570454 chr3L 22570571 22570598 9 143 1.0 5.5 3.2 2.1 170 chr3L 22570428 intergenic not near genes chr3L 22570513 intergenic not near genes chr3L 22570598 intergenic not near genes chr3L_9_22570001 chr3L_22570001 RAL-45 869 chr3L 22577615 22577648 chr3L 22582402 22582435 Doc 13 4788 2.5 4.5 3.5 2.9 4820 chr3L 22577615 intergenic not near genes chr3L 22580025 intergenic not near genes chr3L 22582435 3` UTR CG14459 - chr3L_13_22580001 chr3L_22580001 RAL-45 870 chr3L 22612283 22612297 chr3L 22612453 22612468 9 171 7.0 3.0 5.0 1.5 185 chr3L 22612283 intron CG14459 - chr3L 22612376 intron CG14459 - chr3L 22612468 intron CG14459 - chr3L_9_22610001 chr3L_22610001 RAL-45 871 chr3L 22617199 22617217 chr3L 22624650 22624669 blood 5 7452 4.0 1.0 2.5 1.4 7470 chr3L 22617199 intron CG14459 - chr3L 22620934 intron CG14459 - chr3L 22624669 intron CG14459 - chr3L_5_22620001 chr3L_22620001 RAL-45 872 chr3L 22630751 22630771 chr3L 22630830 22630850 5 79 2.0 3.5 2.8 1.3 99 chr3L 22630751 intron CG14459 - chr3L 22630800 intron CG14459 - chr3L 22630850 intron CG14459 - chr3L_5_22630001 chr3L_22630001 RAL-45 873 chr3L 22652319 22652354 chr3L 22652457 22652492 13 138 0.0 2.0 1.0 6.5 173 chr3L 22652319 exon CG33772 - chr3L 22652406 intron CG33772 - chr3L 22652492 exon CG33772 - chr3L_13_22650001 chr3L_22650001 RAL-45 874 chr3L 22853696 22853719 chr3L 22853782 22853805 5 86 2.0 3.5 2.8 1.3 109 chr3L 22853696 5` UTR CR43426 + chr3L 22853750 5` UTR CR43426 + chr3L 22853805 5` UTR CR43426 + chr3L_5_22850001 chr3L_22850001 RAL-45 875 chr3L 22989869 22989892 chr3L 22996835 22996866 297 6 6972 1.0 1.5 1.2 2.7 6997 chr3L 22989869 intergenic not near genes chr3L 22993368 intergenic not near genes chr3L 22996866 intergenic not near genes chr3L_6_22990001 chr3L_22990001 RAL-45 876 chr3L 23042227 23042253 chr3L 23048979 23049005 gypsy6 9 6752 3.5 3.5 3.5 2.0 6778 chr3L 23042227 intergenic not near genes chr3L 23045616 intergenic not near genes chr3L 23049005 intergenic not near genes chr3L_9_23045001 chr3L_23045001 RAL-45 877 chr3L 23088288 23088312 chr3L 23088369 23088394 18 81 6.0 2.5 4.2 3.5 106 chr3L 23088288 intergenic not near genes chr3L 23088341 intergenic not near genes chr3L 23088394 intergenic not near genes chr3L_18_23085001 chr3L_23085001 RAL-45 878 chr3L 23603172 23603186 chr3L 23603266 23603280 4 94 1.5 1.5 1.5 1.6 108 chr3L 23603172 intron AGO3 + chr3L 23603226 intron AGO3 + chr3L 23603280 intron AGO3 + chr3L_4_23600001 chr3L_23600001 RAL-45 879 chr3L 24168786 24168822 chr3L 24176114 24176149 ZAM 20 7323 9.5 7.5 8.5 2.1 7363 chr3L 24168786 intron Snap25 + chr3L 24172468 intron Snap25 + chr3L 24176149 intron Snap25 + chr3L_20_24170001 chr3L_24170001 RAL-45 880 chr3L 25331637 25331651 chr3L 25331727 25331742 4 90 4.5 3.5 4.0 0.8 105 chr3L 25331637 intergenic not near genes chr3L 25331690 intergenic not near genes chr3L 25331742 intergenic not near genes chr3L_4_25330001 chr3L_25330001 RAL-45 881 chr3L 26374898 26374909 chr3L 26375036 26375047 4 138 4.0 4.0 4.0 0.8 149 chr3L 26374898 intergenic not near genes chr3L 26374972 intergenic not near genes chr3L 26375047 intergenic not near genes chr3L_4_26370001 chr3L_26370001 RAL-45 882 chr3L 27390690 27390712 chr3L 27390769 27390791 4 79 29.5 22.0 25.8 0.1 101 chr3L 27390690 intron Dbp80 + chr3L 27390740 intron Dbp80 + chr3L 27390791 intron Dbp80 + chr3L_4_27390001 chr3L_27390001 RAL-45 883 chr3R 1521169 1521180 chr3R 1521256 1521267 4 88 9.0 11.0 10.0 0.4 98 chr3R 1521169 intergenic not near genes chr3R 1521218 intergenic not near genes chr3R 1521267 intergenic not near genes chr3R_4_1520001 chr3R_1520001 RAL-45 884 chr3R 2490906 2490927 chr3R 2491001 2491031 4 92 2.5 2.0 2.2 1.2 125 chr3R 2490906 intergenic not near genes chr3R 2490968 intergenic not near genes chr3R 2491031 intergenic not near genes chr3R_4_2490001 chr3R_2490001 RAL-45 885 chr3R 2534138 2534165 chr3R 2541704 2541718 8 7566 8.5 10.5 9.5 0.8 7580 chr3R 2534138 intergenic not near genes chr3R 2537928 intergenic not near genes chr3R 2541718 intergenic not near genes chr3R_8_2535001 chr3R_2535001 RAL-45 886 chr3R 3178703 3178709 chr3R 3595186 3595193 4 416484 7.5 13.5 10.5 0.3 416490 chr3R 3178703 intron CG42617 - chr3R 3386948 intergenic not near genes chr3R 3595193 intergenic not near genes chr3R_4_3385001 chr3R_3385001 RAL-45 887 chr3R 3796835 3796862 chr3R 3797261 3797289 9 426 5.0 3.0 4.0 1.8 454 chr3R 3796835 intergenic not near genes chr3R 3797062 intergenic not near genes chr3R 3797289 intergenic not near genes chr3R_9_3795001 chr3R_3795001 RAL-45 888 chr3R 4408406 4408435 chr3R 4412710 4412739 Juan 5 4302 2.5 0.5 1.5 2.0 4333 chr3R 4408406 intron CG32944 - chr3R 4410572 intron CG32944 - chr3R 4412739 intron CG32944 - chr3R_5_4410001 chr3R_4410001 RAL-45 889 chr3R 4599307 4599332 chr3R 4599384 4599412 6 82 0.5 0.0 0.2 5.0 105 chr3R 4599307 intron CR44317 - chr3R 4599360 intron CR44317 - chr3R 4599412 intron CR44317 - chr3R_6_4595001 chr3R_4595001 RAL-45 890 chr3R 4753245 4753261 chr3R 4757548 4757564 F-element 5 4303 9.0 7.0 8.0 0.6 4319 chr3R 4753245 intron,intron atms +,CG44098 - chr3R 4755404 intron,intron atms +,CG44098 - chr3R 4757564 intron,exon atms +,CG44098 - chr3R_5_4755001 chr3R_4755001 RAL-45 891 chr3R 4769158 4769180 chr3R 4769236 4769258 6 78 6.5 2.0 4.2 1.2 100 chr3R 4769158 intron,intron atms +,CG44098 - chr3R 4769208 intron,intron atms +,CG44098 - chr3R 4769258 intron,intron atms +,CG44098 - chr3R_6_4765001 chr3R_4765001 RAL-45 892 chr3R 4784520 4784546 chr3R 4791394 4791421 13 6875 31.0 39.0 35.0 0.4 6901 chr3R 4784520 exon CG17387 - chr3R 4787970 exon ctrip - chr3R 4791421 exon ctrip - chr3R_13_4785001 chr3R_4785001 RAL-45 893 chr3R 4824336 4824356 chr3R 4824416 4824436 5 77 1.0 3.0 2.0 1.7 100 chr3R 4824336 intergenic not near genes chr3R 4824386 intergenic not near genes chr3R 4824436 intergenic not near genes chr3R_5_4820001 chr3R_4820001 RAL-45 894 chr3R 4887486 4887504 chr3R 4894863 4894881 rover 4 7377 2.5 5.0 3.8 0.8 7395 chr3R 4887486 intergenic not near genes chr3R 4891184 intergenic not near genes chr3R 4894881 intergenic not near genes chr3R_4_4890001 chr3R_4890001 RAL-45 895 chr3R 4922342 4922363 chr3R 4922421 4922442 5 79 3.5 3.5 3.5 1.1 100 chr3R 4922342 intron Cdep + chr3R 4922392 intron Cdep + chr3R 4922442 intron Cdep + chr3R_5_4920001 chr3R_4920001 RAL-45 896 chr3R 4966004 4966035 chr3R 4966096 4966127 6 92 1.5 3.5 2.5 1.7 123 chr3R 4966004 intron CG1124 + chr3R 4966066 intron CG1124 + chr3R 4966127 intron CG1124 + chr3R_6_4965001 chr3R_4965001 RAL-45 897 chr3R 4979990 4980016 chr3R 4980068 4980099 11 82 2.5 1.0 1.8 3.9 109 chr3R 4979990 intergenic not near genes chr3R 4980044 intergenic not near genes chr3R 4980099 intergenic not near genes chr3R_11_4980001 chr3R_4980001 RAL-45 898 chr3R 5036849 5036880 chr3R 5037225 5037254 9 375 3.0 3.0 3.0 2.2 405 chr3R 5036849 intergenic not near genes chr3R 5037052 intergenic not near genes chr3R 5037254 intergenic not near genes chr3R_9_5035001 chr3R_5035001 RAL-45 899 chr3R 5045844 5045863 chr3R 5052946 5052965 HMS-Beagle 4 7102 5.5 1.0 3.2 1.0 7121 chr3R 5045844 intron CR43635 - chr3R 5049404 intergenic not near genes chr3R 5052965 intergenic CR45588 - chr3R_4_5045001 chr3R_5045001 RAL-45 900 chr3R 5067991 5068009 chr3R 5073508 5073526 mdg3 4 5517 2.5 2.0 2.2 1.2 5535 chr3R 5067991 intergenic not near genes chr3R 5070758 intergenic not near genes chr3R 5073526 intergenic not near genes chr3R_4_5070001 chr3R_5070001 RAL-45 901 chr3R 5158147 5158171 chr3R 5158240 5158264 7 93 1.5 1.5 1.5 2.8 117 chr3R 5158147 intron dpr16 + chr3R 5158206 intron dpr16 + chr3R 5158264 intron dpr16 + chr3R_7_5155001 chr3R_5155001 RAL-45 902 chr3R 5191369 5191398 chr3R 5191646 5191674 9 276 21.0 23.5 22.2 0.4 305 chr3R 5191369 intron cno - chr3R 5191522 intron cno - chr3R 5191674 intron cno - chr3R_9_5190001 chr3R_5190001 RAL-45 903 chr3R 5306056 5306066 chr3R 5306197 5306226 5 156 1.0 1.0 1.0 2.5 170 chr3R 5306056 intron mtd - chr3R 5306141 intron mtd - chr3R 5306226 intron mtd - chr3R_5_5305001 chr3R_5305001 RAL-45 904 chr3R 5338400 5338427 chr3R 5343577 5343590 Rt1c 12 5175 1.5 3.5 2.5 3.4 5190 chr3R 5338400 intron mtd - chr3R 5340995 intron mtd - chr3R 5343590 intron mtd - chr3R_12_5340001 chr3R_5340001 RAL-45 905 chr3R 5445967 5445977 chr3R 5452426 5452437 Burdock 5 6460 2.5 2.0 2.2 1.6 6470 chr3R 5445967 intron CG14669 + chr3R 5449202 intron CG14669 + chr3R 5452437 intron CG14669 + chr3R_5_5445001 chr3R_5445001 RAL-45 906 chr3R 5463892 5463930 chr3R 5464033 5464071 19 141 3.5 4.5 4.0 3.8 179 chr3R 5463892 intron PEK - chr3R 5463982 intron PEK - chr3R 5464071 intron PEK - chr3R_19_5460001 chr3R_5460001 RAL-45 907 chr3R 5688786 5688809 chr3R 5688906 5688930 8 120 4.0 4.0 4.0 1.6 144 chr3R 5688786 intron plx + chr3R 5688858 intron plx + chr3R 5688930 intron plx + chr3R_8_5685001 chr3R_5685001 RAL-45 908 chr3R 5746020 5746043 chr3R 5746260 5746284 pogo 6 240 2.0 4.0 3.0 1.5 264 chr3R 5746020 3` UTR Madm + chr3R 5746152 3` UTR Madm + chr3R 5746284 3` UTR Madm + chr3R_6_5745001 chr3R_5745001 RAL-45 909 chr3R 5765631 5765658 chr3R 5765715 5765737 11 83 3.5 2.5 3.0 2.8 106 chr3R 5765631 intron CG2082 - chr3R 5765684 intron CG2082 - chr3R 5765737 intron CG2082 - chr3R_11_5765001 chr3R_5765001 RAL-45 910 chr3R 5809113 5809142 chr3R 5809354 5809383 pogo 6 237 3.5 1.5 2.5 1.7 270 chr3R 5809113 3` UTR CG11000 + chr3R 5809248 3` UTR CG11000 + chr3R 5809383 3` UTR CG11000 + chr3R_6_5805001 chr3R_5805001 RAL-45 911 chr3R 5822387 5822411 chr3R 5823554 5823578 1360 4 1167 2.0 3.5 2.8 1.1 1191 chr3R 5822387 3` UTR CG2023 - chr3R 5822982 3` UTR CG2023 - chr3R 5823578 3` UTR CG2023 - chr3R_4_5820001 chr3R_5820001 RAL-45 912 chr3R 5927569 5927591 chr3R 5927806 5927831 pogo 8 239 3.5 1.5 2.5 2.3 262 chr3R 5927569 intron CG34113 - chr3R 5927700 intron CG34113 - chr3R 5927831 intron CG34113 - chr3R_8_5925001 chr3R_5925001 RAL-45 913 chr3R 5947966 5947999 chr3R 5948061 5948092 10 94 2.0 4.5 3.2 2.4 126 chr3R 5947966 intron CG34113 - chr3R 5948029 intron CG34113 - chr3R 5948092 intron CG34113 - chr3R_10_5945001 chr3R_5945001 RAL-45 914 chr3R 6015964 6015992 chr3R 6024445 6024460 Tirant 12 8478 1.5 3.5 2.5 3.4 8496 chr3R 6015964 intergenic not near genes chr3R 6020212 intergenic not near genes chr3R 6024460 intergenic not near genes chr3R_12_6020001 chr3R_6020001 RAL-45 915 chr3R 6059870 6059899 chr3R 6059954 6059962 5 78 3.5 2.0 2.8 1.3 92 chr3R 6059870 intergenic not near genes chr3R 6059916 intergenic not near genes chr3R 6059962 intergenic not near genes chr3R_5_6055001 chr3R_6055001 RAL-45 916 chr3R 6158514 6158525 chr3R 6167097 6167104 Tirant 5 8582 4.5 6.5 5.5 0.8 8590 chr3R 6158514 intergenic not near genes chr3R 6162809 intergenic not near genes chr3R 6167104 intergenic CG1077 + chr3R_5_6160001 chr3R_6160001 RAL-45 917 chr3R 6158528 6158539 chr3R 6167096 6167122 Tirant 4 8579 3.0 6.5 4.8 0.7 8594 chr3R 6158528 intergenic not near genes chr3R 6162825 intergenic not near genes chr3R 6167122 intergenic CG1077 + chr3R_4_6160001 chr3R_6160001 RAL-45 918 chr3R 6175182 6175196 chr3R 6182448 6182468 HMS-Beagle2 5 7271 0.5 1.0 0.8 2.8 7286 chr3R 6175182 intergenic Osi1 + chr3R 6178825 intron CR45194 + chr3R 6182468 intergenic CR45194 + chr3R_5_6175001 chr3R_6175001 RAL-45 919 chr3R 6553024 6553048 chr3R 6553102 6553126 9 78 4.5 5.0 4.8 1.6 102 chr3R 6553024 intron dpr11 - chr3R 6553075 intron dpr11 - chr3R 6553126 intron dpr11 - chr3R_9_6550001 chr3R_6550001 RAL-45 920 chr3R 6560753 6560787 chr3R 6560885 6560919 10 132 1.5 4.0 2.8 2.6 166 chr3R 6560753 intron dpr11 - chr3R 6560836 intron dpr11 - chr3R 6560919 intron dpr11 - chr3R_10_6560001 chr3R_6560001 RAL-45 921 chr3R 6616877 6616893 chr3R 6616954 6616970 4 77 0.5 4.0 2.2 1.2 93 chr3R 6616877 intergenic not near genes chr3R 6616924 intergenic not near genes chr3R 6616970 intergenic not near genes chr3R_4_6615001 chr3R_6615001 RAL-45 922 chr3R 6639909 6639929 chr3R 6639987 6640007 9 76 3.5 0.0 1.8 3.2 98 chr3R 6639909 intergenic not near genes chr3R 6639958 intergenic not near genes chr3R 6640007 intergenic not near genes chr3R_9_6635001 chr3R_6635001 RAL-45 923 chr3R 6737499 6737529 chr3R 6739286 6739312 Doc 13 1786 1.0 2.5 1.8 4.6 1813 chr3R 6737499 intron pb - chr3R 6738406 intron pb - chr3R 6739312 intron pb - chr3R_13_6735001 chr3R_6735001 RAL-45 924 chr3R 6773765 6773782 chr3R 6773843 6773862 4 80 1.0 7.0 4.0 0.8 97 chr3R 6773765 intron CR42721 + chr3R 6773814 intron CR42721 + chr3R 6773862 intron CR42721 + chr3R_4_6770001 chr3R_6770001 RAL-45 925 chr3R 6812078 6812103 chr3R 6812163 6812173 5 81 1.5 1.0 1.2 2.3 95 chr3R 6812078 intron CR42651 - chr3R 6812126 intron CR42651 - chr3R 6812173 intron CR42651 - chr3R_5_6810001 chr3R_6810001 RAL-45 926 chr3R 6842776 6842810 chr3R 6842859 6842893 10 82 0.0 2.5 1.2 4.5 117 chr3R 6842776 intron Scr - chr3R 6842834 intron Scr - chr3R 6842893 intron Scr - chr3R_10_6840001 chr3R_6840001 RAL-45 927 chr3R 6991176 6991200 chr3R 6991252 6991275 15 75 3.5 1.0 2.2 4.7 99 chr3R 6991176 intron Antp - chr3R 6991226 intron Antp - chr3R 6991275 intron Antp - chr3R_15_6990001 chr3R_6990001 RAL-45 928 chr3R 7092783 7092818 chr3R 7093347 7093382 6 564 0.5 1.5 1.0 3.0 599 chr3R 7092783 3` UTR CR43685 - chr3R 7093082 intron CR43685 - chr3R 7093382 3` UTR CR43685 - chr3R_6_7090001 chr3R_7090001 RAL-45 929 chr3R 7103292 7103314 chr3R 7103368 7103390 10 76 4.0 3.5 3.8 2.1 98 chr3R 7103292 intron Alh - chr3R 7103341 intron Alh - chr3R 7103390 intron Alh - chr3R_10_7100001 chr3R_7100001 RAL-45 930 chr3R 7259963 7259985 chr3R 7260679 7260698 5 715 1.0 3.5 2.2 1.6 735 chr3R 7259963 intron Gld - chr3R 7260330 intron Gld - chr3R 7260698 intron Gld - chr3R_5_7260001 chr3R_7260001 RAL-45 931 chr3R 7565002 7565032 chr3R 7565086 7565099 6 80 2.0 1.5 1.8 2.1 97 chr3R 7565002 intergenic not near genes chr3R 7565050 intergenic not near genes chr3R 7565099 intergenic not near genes chr3R_6_7565001 chr3R_7565001 RAL-45 932 chr3R 7574622 7574644 chr3R 7574702 7574726 4 81 0.0 0.0 0.0 4.0 104 chr3R 7574622 intron CG34127 - chr3R 7574674 intron CG34127 - chr3R 7574726 intron CG34127 - chr3R_4_7570001 chr3R_7570001 RAL-45 933 chr3R 7721665 7721674 chr3R 7721794 7721803 4 128 4.5 2.0 3.2 1.0 138 chr3R 7721665 intergenic not near genes chr3R 7721734 intergenic not near genes chr3R 7721803 intergenic not near genes chr3R_4_7720001 chr3R_7720001 RAL-45 934 chr3R 7726153 7726188 chr3R 7726230 7726265 15 77 3.0 4.0 3.5 3.3 112 chr3R 7726153 intergenic not near genes chr3R 7726209 intergenic not near genes chr3R 7726265 intergenic not near genes chr3R_15_7725001 chr3R_7725001 RAL-45 935 chr3R 8013890 8013919 chr3R 8022854 8022883 6 8968 29.5 35.0 32.2 0.2 8993 chr3R 8013890 exon Pbp95 + chr3R 8018386 exon CG2747 - chr3R 8022883 exon CG2747 - chr3R_6_8015001 chr3R_8015001 RAL-45 936 chr3R 8094410 8094437 chr3R 8099715 8099742 Transpac 5 5305 2.0 2.5 2.2 1.6 5332 chr3R 8094410 intron CG7900 + chr3R 8097076 intron CG7900 + chr3R 8099742 intron CG7900 + chr3R_5_8095001 chr3R_8095001 RAL-45 937 chr3R 8207555 8207588 chr3R 8208398 8208433 F-element 4 844 1.5 3.0 2.2 1.2 878 chr3R 8207555 intergenic not near genes chr3R 8207994 intergenic not near genes chr3R 8208433 intergenic not near genes chr3R_4_8205001 chr3R_8205001 RAL-45 938 chr3R 8339246 8339247 chr3R 21907534 21907536 18 13568288 16.0 21.0 18.5 0.9 13568290 chr3R 8339246 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_18_15120001 chr3R_15120001 RAL-45 939 chr3R 8403010 8403040 chr3R 8412176 8412206 roo 11 9166 4.0 5.0 4.5 2.0 9196 chr3R 8403010 intron CG45263 - chr3R 8407608 intron CG45263 - chr3R 8412206 intron CG45263 - chr3R_11_8405001 chr3R_8405001 RAL-45 940 chr3R 8570483 8570510 chr3R 8575112 8575146 HMS-Beagle 14 4634 4.5 5.0 4.8 2.4 4663 chr3R 8570483 intergenic not near genes chr3R 8572814 intergenic not near genes chr3R 8575146 intergenic not near genes chr3R_14_8570001 chr3R_8570001 RAL-45 941 chr3R 8579541 8579567 chr3R 8579804 8579839 7 271 3.0 5.5 4.2 1.3 298 chr3R 8579541 intron 5-HT2B + chr3R 8579690 intron 5-HT2B + chr3R 8579839 intron 5-HT2B + chr3R_7_8575001 chr3R_8575001 RAL-45 942 chr3R 8601773 8601791 chr3R 8610923 8610944 roo 4 9152 2.5 2.5 2.5 1.1 9171 chr3R 8601773 intron 5-HT2B + chr3R 8606358 intron 5-HT2B + chr3R 8610944 intron 5-HT2B + chr3R_4_8605001 chr3R_8605001 RAL-45 943 chr3R 8811377 8811413 chr3R 8811510 8811510 6 126 3.0 1.5 2.2 1.9 133 chr3R 8811377 intron CG9837 - chr3R 8811444 intron CG9837 - chr3R 8811510 intron CG9837 - chr3R_6_8810001 chr3R_8810001 RAL-45 944 chr3R 8894873 8894894 chr3R 8896029 8896050 1360 4 1156 1.5 2.0 1.8 1.4 1177 chr3R 8894873 intron pyd - chr3R 8895462 intron pyd - chr3R 8896050 intron pyd - chr3R_4_8895001 chr3R_8895001 RAL-45 945 chr3R 8917896 8917912 chr3R 8917975 8917992 4 80 0.0 2.5 1.2 1.8 96 chr3R 8917896 intron pyd - chr3R 8917944 intron pyd - chr3R 8917992 intron pyd - chr3R_4_8915001 chr3R_8915001 RAL-45 946 chr3R 8945912 8945938 chr3R 8945996 8946022 8 83 2.0 2.0 2.0 2.7 110 chr3R 8945912 intergenic not near genes chr3R 8945967 intergenic not near genes chr3R 8946022 intergenic not near genes chr3R_8_8945001 chr3R_8945001 RAL-45 947 chr3R 9000466 9000494 chr3R 9005488 9005516 7 5026 13.5 24.0 18.8 0.4 5050 chr3R 9000466 intron CG31100 - chr3R 9002991 intron CG31100 - chr3R 9005516 exon Prosbeta3 - chr3R_7_9000001 chr3R_9000001 RAL-45 948 chr3R 9101837 9101869 chr3R 9101935 9101962 4 97 1.0 1.0 1.0 2.0 125 chr3R 9101837 intron pum - chr3R 9101900 intron pum - chr3R 9101962 intron pum - chr3R_4_9100001 chr3R_9100001 RAL-45 949 chr3R 9196160 9196190 chr3R 9196251 9196281 14 88 2.0 3.5 2.8 3.7 121 chr3R 9196160 intron pum - chr3R 9196220 intron pum - chr3R 9196281 intron pum - chr3R_14_9195001 chr3R_9195001 RAL-45 950 chr3R 9204543 9204551 chr3R 9204634 9204651 5 98 4.0 4.5 4.2 1.0 108 chr3R 9204543 intron pum - chr3R 9204597 intron pum - chr3R 9204651 intron pum - chr3R_5_9200001 chr3R_9200001 RAL-45 951 chr3R 9251433 9251461 chr3R 9251513 9251541 4 80 0.5 2.0 1.2 1.8 108 chr3R 9251433 intergenic CG8420 +,St2 + chr3R 9251487 intergenic CG8420 +,St2 + chr3R 9251541 intergenic CG8420 +,St2 + chr3R_4_9250001 chr3R_9250001 RAL-45 952 chr3R 9278794 9278808 chr3R 9284054 9284068 Rt1a 4 5260 0.5 6.5 3.5 0.9 5274 chr3R 9278794 intergenic not near genes chr3R 9281431 intergenic not near genes chr3R 9284068 intergenic not near genes chr3R_4_9280001 chr3R_9280001 RAL-45 953 chr3R 9319581 9319605 chr3R 9320016 9320026 jockey 6 432 1.5 2.0 1.8 2.1 445 chr3R 9319581 intron CG8861 - chr3R 9319804 intron CG8861 - chr3R 9320026 intron CG8861 - chr3R_6_9315001 chr3R_9315001 RAL-45 954 chr3R 9401875 9401906 chr3R 9402186 9402217 9 311 6.0 5.5 5.8 1.3 342 chr3R 9401875 exon CG8132 + chr3R 9402046 exon CG8132 + chr3R 9402217 exon CG8132 + chr3R_9_9400001 chr3R_9400001 RAL-45 955 chr3R 9898796 9898819 chr3R 9898880 9898911 4 90 1.5 1.0 1.2 1.8 115 chr3R 9898796 intron Glut4EF + chr3R 9898854 intron Glut4EF + chr3R 9898911 intron Glut4EF + chr3R_4_9895001 chr3R_9895001 RAL-45 956 chr3R 10073770 10073801 chr3R 10073879 10073910 10 109 1.5 1.0 1.2 4.5 140 chr3R 10073770 intergenic nerfin-2 +,CG5361 - chr3R 10073840 3` UTR CG5361 - chr3R 10073910 exon CG5361 - chr3R_10_10070001 chr3R_10070001 RAL-45 957 chr3R 10192285 10192304 chr3R 10192471 10192490 11 185 4.0 3.0 3.5 2.4 205 chr3R 10192285 intron Syn + chr3R 10192388 intron Syn + chr3R 10192490 intron Syn + chr3R_11_10190001 chr3R_10190001 RAL-45 958 chr3R 10231786 10231814 chr3R 10237363 10237391 mdg3 4 5577 0.5 0.5 0.5 2.7 5605 chr3R 10231786 intron CG42795 + chr3R 10234588 intron CG42795 + chr3R 10237391 intron CG42795 + chr3R_4_10230001 chr3R_10230001 RAL-45 959 chr3R 10512367 10512396 chr3R 10512474 10512503 6 107 4.5 1.0 2.8 1.6 136 chr3R 10512367 intron hth - chr3R 10512435 intron hth - chr3R 10512503 intron hth - chr3R_6_10510001 chr3R_10510001 RAL-45 960 chr3R 10563456 10563492 chr3R 10563554 10563590 12 97 2.5 2.0 2.2 3.8 134 chr3R 10563456 intron hth - chr3R 10563523 intron hth - chr3R 10563590 intron hth - chr3R_12_10560001 chr3R_10560001 RAL-45 961 chr3R 10641591 10641625 chr3R 10641671 10641702 9 80 2.5 4.5 3.5 2.0 111 chr3R 10641591 5` UTR CR44018 + chr3R 10641646 5` UTR CR44018 + chr3R 10641702 5` UTR CR44018 + chr3R_9_10640001 chr3R_10640001 RAL-45 962 chr3R 10646105 10646138 chr3R 10646256 10646289 5 151 0.0 2.0 1.0 2.5 184 chr3R 10646105 intergenic CR44018 + chr3R 10646197 intergenic CR44018 + chr3R 10646289 intergenic not near genes chr3R_5_10645001 chr3R_10645001 RAL-45 963 chr3R 10723766 10723793 chr3R 10723858 10723885 6 92 1.0 0.5 0.8 3.3 119 chr3R 10723766 intergenic not near genes chr3R 10723826 intergenic not near genes chr3R 10723885 intergenic not near genes chr3R_6_10720001 chr3R_10720001 RAL-45 964 chr3R 10727644 10727679 chr3R 10727722 10727759 15 79 2.5 5.0 3.8 3.1 115 chr3R 10727644 intergenic not near genes chr3R 10727702 intergenic not near genes chr3R 10727759 intergenic not near genes chr3R_15_10725001 chr3R_10725001 RAL-45 965 chr3R 10757335 10757345 chr3R 10757433 10757433 5 96 8.5 9.0 8.8 0.5 98 chr3R 10757335 intron,intron CG31272 -,CR45015 + chr3R 10757384 intron,intron CG31272 -,CR45015 + chr3R 10757433 intron,intron CG31272 -,CR45015 + chr3R_5_10755001 chr3R_10755001 RAL-45 966 chr3R 10870876 10870897 chr3R 10870957 10870978 5 81 2.0 5.5 3.8 1.0 102 chr3R 10870876 intergenic Fdh -,Tsp86D + chr3R 10870927 3` UTR Fdh - chr3R 10870978 3` UTR Fdh - chr3R_5_10870001 chr3R_10870001 RAL-45 967 chr3R 10919689 10919718 chr3R 10919767 10919791 6 77 3.0 0.0 1.5 2.4 102 chr3R 10919689 intergenic not near genes chr3R 10919740 intergenic not near genes chr3R 10919791 intergenic not near genes chr3R_6_10915001 chr3R_10915001 RAL-45 968 chr3R 10963559 10963576 chr3R 10963653 10963670 5 94 3.0 0.5 1.8 1.8 111 chr3R 10963559 intergenic not near genes chr3R 10963614 intergenic not near genes chr3R 10963670 intergenic not near genes chr3R_5_10960001 chr3R_10960001 RAL-45 969 chr3R 11078947 11078980 chr3R 11079027 11079060 10 80 0.5 2.5 1.5 4.0 113 chr3R 11078947 intergenic not near genes chr3R 11079004 intergenic not near genes chr3R 11079060 intergenic not near genes chr3R_10_11075001 chr3R_11075001 RAL-45 970 chr3R 11102681 11102716 chr3R 11102770 11102805 14 86 2.0 2.5 2.2 4.4 124 chr3R 11102681 intergenic not near genes chr3R 11102743 intergenic not near genes chr3R 11102805 intergenic not near genes chr3R_14_11100001 chr3R_11100001 RAL-45 971 chr3R 11379235 11379260 chr3R 11388390 11388414 roo 4 9154 0.0 2.0 1.0 2.0 9179 chr3R 11379235 intron pros + chr3R 11383824 intron pros + chr3R 11388414 intron pros + chr3R_4_11380001 chr3R_11380001 RAL-45 972 chr3R 11443679 11443712 chr3R 11443771 11443804 8 91 1.5 1.0 1.2 3.6 125 chr3R 11443679 intron,intron sals -,CG17230 + chr3R 11443742 intron,intron sals -,CG17230 + chr3R 11443804 intron,intron sals -,CG17230 + chr3R_8_11440001 chr3R_11440001 RAL-45 973 chr3R 11518816 11518847 chr3R 11518907 11518938 7 90 1.5 3.5 2.5 2.0 122 chr3R 11518816 intergenic not near genes chr3R 11518877 intergenic not near genes chr3R 11518938 intergenic not near genes chr3R_7_11515001 chr3R_11515001 RAL-45 974 chr3R 11691230 11691246 chr3R 11691554 11691581 10 331 2.5 1.0 1.8 3.6 351 chr3R 11691230 exon CG18765 - chr3R 11691406 exon CG18765 - chr3R 11691581 intron CG18765 - chr3R_10_11690001 chr3R_11690001 RAL-45 975 chr3R 11710210 11710236 chr3R 11710288 11710314 13 77 5.0 5.0 5.0 2.2 104 chr3R 11710210 intergenic not near genes chr3R 11710262 intergenic not near genes chr3R 11710314 intergenic not near genes chr3R_13_11710001 chr3R_11710001 RAL-45 976 chr3R 11717965 11717992 chr3R 11718417 11718442 4 452 3.5 3.0 3.2 1.0 477 chr3R 11717965 intergenic not near genes chr3R 11718204 intergenic not near genes chr3R 11718442 intergenic not near genes chr3R_4_11715001 chr3R_11715001 RAL-45 977 chr3R 11734177 11734187 chr3R 11734296 11734306 4 119 3.0 5.0 4.0 0.8 129 chr3R 11734177 intergenic not near genes chr3R 11734242 intergenic not near genes chr3R 11734306 intergenic not near genes chr3R_4_11730001 chr3R_11730001 RAL-45 978 chr3R 11771831 11771861 chr3R 11771914 11771944 4 83 1.5 1.5 1.5 1.6 113 chr3R 11771831 intron l(3)neo38 - chr3R 11771888 intron l(3)neo38 - chr3R 11771944 intron l(3)neo38 - chr3R_4_11770001 chr3R_11770001 RAL-45 979 chr3R 11840062 11840087 chr3R 11840159 11840179 9 94 1.5 0.0 0.8 5.0 117 chr3R 11840062 intron CG6959 - chr3R 11840120 intron CG6959 - chr3R 11840179 intron CG6959 - chr3R_9_11840001 chr3R_11840001 RAL-45 980 chr3R 11841065 11841096 chr3R 11846256 11846280 BS 6 5189 4.0 1.5 2.8 1.6 5215 chr3R 11841065 intron CG6959 - chr3R 11843672 intron CG6959 - chr3R 11846280 intron CG6959 - chr3R_6_11840001 chr3R_11840001 RAL-45 981 chr3R 12022885 12022912 chr3R 12025062 12025089 pogo 4 2177 2.0 0.5 1.2 1.8 2204 chr3R 12022885 intergenic not near genes chr3R 12023987 intergenic not near genes chr3R 12025089 intergenic not near genes chr3R_4_12020001 chr3R_12020001 RAL-45 982 chr3R 12047032 12047057 chr3R 12047125 12047150 4 93 2.0 3.0 2.5 1.1 118 chr3R 12047032 intergenic not near genes chr3R 12047091 intergenic not near genes chr3R 12047150 intergenic not near genes chr3R_4_12045001 chr3R_12045001 RAL-45 983 chr3R 12116129 12116155 chr3R 12116224 12116250 5 94 4.0 2.0 3.0 1.2 121 chr3R 12116129 intergenic not near genes chr3R 12116190 intergenic not near genes chr3R 12116250 intergenic not near genes chr3R_5_12115001 chr3R_12115001 RAL-45 984 chr3R 12560938 12560953 chr3R 12561001 12561036 8 74 1.0 3.0 2.0 2.7 98 chr3R 12560938 exon Octbeta2R - chr3R 12560987 5` UTR Octbeta2R - chr3R 12561036 5` UTR Octbeta2R - chr3R_8_12560001 chr3R_12560001 RAL-45 985 chr3R 12646735 12646754 chr3R 12647027 12647050 8 294 3.5 0.5 2.0 2.7 315 chr3R 12646735 intergenic not near genes chr3R 12646892 intergenic not near genes chr3R 12647050 intergenic not near genes chr3R_8_12645001 chr3R_12645001 RAL-45 986 chr3R 12669221 12669251 chr3R 12669299 12669326 10 77 3.0 5.5 4.2 1.9 105 chr3R 12669221 intron CG14395 + chr3R 12669274 intron CG14395 + chr3R 12669326 intron CG14395 + chr3R_10_12665001 chr3R_12665001 RAL-45 987 chr3R 12706478 12706496 chr3R 12715790 12715809 5 9312 40.5 19.5 30.0 0.2 9331 chr3R 12706478 exon mus308 - chr3R 12711144 exon mus308 - chr3R 12715809 intron Men - chr3R_5_12710001 chr3R_12710001 RAL-45 988 chr3R 12733487 12733502 chr3R 12733551 12733578 7 73 4.5 2.0 3.2 1.7 91 chr3R 12733487 intergenic not near genes chr3R 12733532 intergenic not near genes chr3R 12733578 intergenic not near genes chr3R_7_12730001 chr3R_12730001 RAL-45 989 chr3R 12814240 12814268 chr3R 12814317 12814344 5 77 2.5 1.5 2.0 1.7 104 chr3R 12814240 intron CG31345 - chr3R 12814292 intron CG31345 - chr3R 12814344 intron CG31345 - chr3R_5_12810001 chr3R_12810001 RAL-45 990 chr3R 12866493 12866516 chr3R 12866644 12866667 5 151 1.5 1.5 1.5 2.0 174 chr3R 12866493 intergenic not near genes chr3R 12866580 intergenic not near genes chr3R 12866667 intergenic not near genes chr3R_5_12865001 chr3R_12865001 RAL-45 991 chr3R 12920154 12920185 chr3R 12925357 12925384 copia 13 5202 1.5 2.0 1.8 4.6 5230 chr3R 12920154 intron beat-Vb + chr3R 12922769 intron beat-Vb + chr3R 12925384 intron beat-Vb + chr3R_13_12920001 chr3R_12920001 RAL-45 992 chr3R 12931214 12931245 chr3R 12931291 12931322 6 77 3.0 1.0 2.0 2.0 108 chr3R 12931214 intron,3` UTR beat-Vb +,CR44236 - chr3R 12931268 intron,3` UTR beat-Vb +,CR44236 - chr3R 12931322 intron,3` UTR beat-Vb +,CR44236 - chr3R_6_12930001 chr3R_12930001 RAL-45 993 chr3R 13059963 13059974 chr3R 13060158 13060169 4 195 2.5 0.0 1.2 1.8 206 chr3R 13059963 intron sim + chr3R 13060066 intron sim + chr3R 13060169 intron sim + chr3R_4_13060001 chr3R_13060001 RAL-45 994 chr3R 13143043 13143065 chr3R 13148615 13148641 mdg3 15 5574 4.0 4.0 4.0 3.0 5598 chr3R 13143043 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145842 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148641 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_15_13145001 chr3R_13145001 RAL-45 995 chr3R 13173443 13173471 chr3R 13173525 13173553 8 81 1.5 1.5 1.5 3.2 110 chr3R 13173443 intergenic not near genes chr3R 13173498 intergenic not near genes chr3R 13173553 intergenic not near genes chr3R_8_13170001 chr3R_13170001 RAL-45 996 chr3R 13205409 13205437 chr3R 13205490 13205518 9 81 3.5 3.5 3.5 2.0 109 chr3R 13205409 intergenic not near genes chr3R 13205464 intergenic not near genes chr3R 13205518 intergenic not near genes chr3R_9_13205001 chr3R_13205001 RAL-45 997 chr3R 13248653 13248663 chr3R 13248752 13248762 4 99 0.5 0.5 0.5 2.7 109 chr3R 13248653 intron Ace - chr3R 13248708 intron Ace - chr3R 13248762 intron Ace - chr3R_4_13245001 chr3R_13245001 RAL-45 998 chr3R 13252262 13252295 chr3R 13252338 13252371 11 74 0.0 3.5 1.8 3.9 109 chr3R 13252262 intron Ace - chr3R 13252316 intron Ace - chr3R 13252371 intron Ace - chr3R_11_13250001 chr3R_13250001 RAL-45 999 chr3R 13303915 13303948 chr3R 13303998 13304030 8 82 2.5 3.0 2.8 2.1 115 chr3R 13303915 intron CG32473 + chr3R 13303972 intron CG32473 + chr3R 13304030 intron CG32473 + chr3R_8_13300001 chr3R_13300001 RAL-45 1000 chr3R 13435395 13435412 chr3R 13435570 13435587 4 175 0.0 1.5 0.8 2.2 192 chr3R 13435395 intergenic yrt - chr3R 13435491 intergenic not near genes chr3R 13435587 intergenic not near genes chr3R_4_13435001 chr3R_13435001 RAL-45 1001 chr3R 13456382 13456399 chr3R 13456471 13456471 5 86 0.5 1.0 0.8 2.8 89 chr3R 13456382 intron,intron CG14372 +,CR17025 - chr3R 13456426 intron,intron CG14372 +,CR17025 - chr3R 13456471 intron,intron CG14372 +,CR17025 - chr3R_5_13455001 chr3R_13455001 RAL-45 1002 chr3R 13571356 13571387 chr3R 13571456 13571479 7 99 1.5 0.0 0.8 3.9 123 chr3R 13571356 intergenic not near genes chr3R 13571418 intergenic not near genes chr3R 13571479 intergenic not near genes chr3R_7_13570001 chr3R_13570001 RAL-45 1003 chr3R 13574591 13574604 chr3R 13574680 13574692 4 88 1.0 7.5 4.2 0.8 101 chr3R 13574591 intergenic CR43848 + chr3R 13574642 intergenic CR43848 + chr3R 13574692 intergenic CR43848 + chr3R_4_13570001 chr3R_13570001 RAL-45 1004 chr3R 13693028 13693028 chr3R 21907534 21907535 5 8214507 7.5 21.0 14.2 0.3 8214507 chr3R 13693028 3` UTR flfl + chr3R 17800282 exon CG17803 - chr3R 21907535 intergenic CG6678 + chr3R_5_17800001 chr3R_17800001 RAL-45 1005 chr3R 13782071 13782081 chr3R 13782152 13782162 5 81 1.0 4.5 2.8 1.3 91 chr3R 13782071 3` UTR CG9286 + chr3R 13782116 intergenic CG9286 +,Dip-B + chr3R 13782162 intergenic CG9286 +,Dip-B + chr3R_5_13780001 chr3R_13780001 RAL-45 1006 chr3R 13835606 13835620 chr3R 13835698 13835712 5 92 0.5 4.5 2.5 1.4 106 chr3R 13835606 intron Nsf2 - chr3R 13835659 intron Nsf2 - chr3R 13835712 intron Nsf2 - chr3R_5_13835001 chr3R_13835001 RAL-45 1007 chr3R 13863679 13863715 chr3R 13863766 13863802 8 86 1.0 2.5 1.8 2.9 123 chr3R 13863679 intergenic not near genes chr3R 13863740 intergenic not near genes chr3R 13863802 intergenic not near genes chr3R_8_13860001 chr3R_13860001 RAL-45 1008 chr3R 13880555 13880578 chr3R 13880674 13880694 7 120 1.5 2.0 1.8 2.5 139 chr3R 13880555 intergenic not near genes chr3R 13880624 intergenic not near genes chr3R 13880694 intergenic not near genes chr3R_7_13880001 chr3R_13880001 RAL-45 1009 chr3R 14083407 14083438 chr3R 14083508 14083539 5 101 1.0 0.0 0.5 3.3 132 chr3R 14083407 intron foxo + chr3R 14083473 intron foxo + chr3R 14083539 intron foxo + chr3R_5_14080001 chr3R_14080001 RAL-45 1010 chr3R 14166679 14166699 chr3R 14167319 14167327 12 643 5.5 6.0 5.8 1.8 648 chr3R 14166679 3` UTR Dop1R1 - chr3R 14167003 3` UTR Dop1R1 - chr3R 14167327 3` UTR Dop1R1 - chr3R_12_14165001 chr3R_14165001 RAL-45 1011 chr3R 14193731 14193762 chr3R 14193808 14193838 11 78 1.0 2.0 1.5 4.4 107 chr3R 14193731 intron Dop1R1 - chr3R 14193784 intron Dop1R1 - chr3R 14193838 intron Dop1R1 - chr3R_11_14190001 chr3R_14190001 RAL-45 1012 chr3R 14246404 14246416 chr3R 14247888 14247901 jockey 4 1488 2.5 4.5 3.5 0.9 1497 chr3R 14246404 intergenic not near genes chr3R 14247152 intergenic not near genes chr3R 14247901 intergenic not near genes chr3R_4_14245001 chr3R_14245001 RAL-45 1013 chr3R 14527411 14527415 chr3R 14527484 14527492 4 76 3.5 2.5 3.0 1.0 81 chr3R 14527411 intron Pde6 - chr3R 14527452 intron Pde6 - chr3R 14527492 intron Pde6 - chr3R_4_14525001 chr3R_14525001 RAL-45 1014 chr3R 14853304 14853333 chr3R 14853668 14853697 8 364 2.0 2.0 2.0 2.7 393 chr3R 14853304 intron btsz - chr3R 14853500 intron btsz - chr3R 14853697 intron btsz - chr3R_8_14850001 chr3R_14850001 RAL-45 1015 chr3R 14869875 14869895 chr3R 14869964 14869986 4 90 2.5 4.5 3.5 0.9 111 chr3R 14869875 intron btsz - chr3R 14869930 intron btsz - chr3R 14869986 intron btsz - chr3R_4_14865001 chr3R_14865001 RAL-45 1016 chr3R 15114913 15114947 chr3R 15114990 15115024 4 77 1.0 0.0 0.5 2.7 111 chr3R 15114913 intron CG42788 - chr3R 15114968 intron CG42788 - chr3R 15115024 intron CG42788 - chr3R_4_15110001 chr3R_15110001 RAL-45 1017 chr3R 15162548 15162567 chr3R 15167315 15167334 F-element 5 4766 1.5 2.5 2.0 1.7 4786 chr3R 15162548 intron Gyc88E + chr3R 15164941 intron Gyc88E + chr3R 15167334 intron Gyc88E + chr3R_5_15160001 chr3R_15160001 RAL-45 1018 chr3R 15470992 15471010 chr3R 15471070 15471088 4 78 6.5 2.0 4.2 0.8 96 chr3R 15470992 intron AdamTS-A - chr3R 15471040 intron AdamTS-A - chr3R 15471088 intron AdamTS-A - chr3R_4_15470001 chr3R_15470001 RAL-45 1019 chr3R 15601167 15601196 chr3R 15608689 15608718 412 8 7522 7.0 3.0 5.0 1.3 7551 chr3R 15601167 intergenic not near genes chr3R 15604942 intergenic not near genes chr3R 15608718 intergenic not near genes chr3R_8_15600001 chr3R_15600001 RAL-45 1020 chr3R 15618752 15618764 chr3R 15626226 15626238 blood 4 7474 2.0 3.0 2.5 1.1 7486 chr3R 15618752 intergenic not near genes chr3R 15622495 intergenic not near genes chr3R 15626238 intergenic not near genes chr3R_4_15620001 chr3R_15620001 RAL-45 1021 chr3R 15644110 15644136 chr3R 15644190 15644224 11 86 0.5 2.5 1.5 4.4 114 chr3R 15644110 intergenic not near genes chr3R 15644167 intergenic not near genes chr3R 15644224 intergenic not near genes chr3R_11_15640001 chr3R_15640001 RAL-45 1022 chr3R 15691180 15691328 chr3R 15691285 15691415 4 100 0.0 0.0 0.0 4.0 235 chr3R 15691180 intergenic not near genes chr3R 15691298 intergenic not near genes chr3R 15691415 intergenic not near genes chr3R_4_15690001 chr3R_15690001 RAL-45 1023 chr3R 15891672 15891685 chr3R 15892063 15892075 4 391 1.5 3.5 2.5 1.1 403 chr3R 15891672 intron CG14877 - chr3R 15891874 intron CG14877 - chr3R 15892075 intron CG14877 - chr3R_4_15890001 chr3R_15890001 RAL-45 1024 chr3R 15892652 15892671 chr3R 15892732 15892752 5 81 3.5 0.5 2.0 1.7 100 chr3R 15892652 intron CG14877 - chr3R 15892702 intron CG14877 - chr3R 15892752 intron CG14877 - chr3R_5_15890001 chr3R_15890001 RAL-45 1025 chr3R 15938846 15938877 chr3R 15938924 15938955 4 78 2.0 1.0 1.5 1.6 109 chr3R 15938846 intron Sap47 + chr3R 15938900 intron Sap47 + chr3R 15938955 intron Sap47 + chr3R_4_15935001 chr3R_15935001 RAL-45 1026 chr3R 16011039 16011075 chr3R 16011158 16011194 10 118 2.0 2.0 2.0 3.3 155 chr3R 16011039 intron GATAe + chr3R 16011116 intron GATAe + chr3R 16011194 intron GATAe + chr3R_10_16010001 chr3R_16010001 RAL-45 1027 chr3R 16238504 16238530 chr3R 16238582 16238608 7 78 1.0 3.0 2.0 2.3 104 chr3R 16238504 intron tara + chr3R 16238556 intron tara + chr3R 16238608 intron tara + chr3R_7_16235001 chr3R_16235001 RAL-45 1028 chr3R 16246543 16246553 chr3R 16246619 16246629 4 76 0.0 3.5 1.8 1.4 86 chr3R 16246543 intron tara + chr3R 16246586 intron tara + chr3R 16246629 intron tara + chr3R_4_16245001 chr3R_16245001 RAL-45 1029 chr3R 16285241 16285276 chr3R 16285317 16285352 9 76 2.5 1.0 1.8 3.2 111 chr3R 16285241 intron gish + chr3R 16285296 intron gish + chr3R 16285352 intron gish + chr3R_9_16285001 chr3R_16285001 RAL-45 1030 chr3R 16594752 16594775 chr3R 16594830 16594853 7 75 3.0 2.5 2.8 1.8 101 chr3R 16594752 5` UTR CG14892 + chr3R 16594802 5` UTR CG14892 + chr3R 16594853 5` UTR CG14892 + chr3R_7_16590001 chr3R_16590001 RAL-45 1031 chr3R 16756317 16756354 chr3R 16762508 16762543 diver 10 6190 5.0 2.0 3.5 2.2 6226 chr3R 16756317 intron bxd - chr3R 16759430 intron bxd - chr3R 16762543 intron bxd - chr3R_10_16755001 chr3R_16755001 RAL-45 1032 chr3R 17120497 17120535 chr3R 17120722 17120760 5 225 2.5 0.0 1.2 2.3 263 chr3R 17120497 intron,exon cher -,CG34278 + chr3R 17120628 intron,exon cher -,CG34278 + chr3R 17120760 intron,3` UTR cher -,CG34278 + chr3R_5_17120001 chr3R_17120001 RAL-45 1033 chr3R 17273968 17273998 chr3R 17274075 17274104 6 107 2.0 2.0 2.0 2.0 136 chr3R 17273968 intergenic not near genes chr3R 17274036 intergenic not near genes chr3R 17274104 intergenic not near genes chr3R_6_17270001 chr3R_17270001 RAL-45 1034 chr3R 17335158 17335172 chr3R 17335234 17335240 5 73 7.0 2.5 4.8 0.9 82 chr3R 17335158 intron beat-IIa - chr3R 17335199 intron beat-IIa - chr3R 17335240 intron beat-IIa - chr3R_5_17335001 chr3R_17335001 RAL-45 1035 chr3R 17346246 17346247 chr3R 21907534 21907535 4 4561288 19.0 21.0 20.0 0.2 4561289 chr3R 17346246 intron beat-IIa - chr3R 19626890 intron CG6231 - chr3R 21907535 intergenic CG6678 + chr3R_4_19625001 chr3R_19625001 RAL-45 1036 chr3R 17351842 17351869 chr3R 17351922 17351948 6 80 1.5 3.0 2.2 1.9 106 chr3R 17351842 intron beat-IIa - chr3R 17351895 intron beat-IIa - chr3R 17351948 intron beat-IIa - chr3R_6_17350001 chr3R_17350001 RAL-45 1037 chr3R 17415808 17415840 chr3R 17415893 17415925 10 85 2.0 5.5 3.8 2.1 117 chr3R 17415808 exon CG5866 + chr3R 17415866 exon CG5866 + chr3R 17415925 exon CG5866 + chr3R_10_17415001 chr3R_17415001 RAL-45 1038 chr3R 17423876 17423903 chr3R 17423972 17423999 8 96 2.0 2.0 2.0 2.7 123 chr3R 17423876 intergenic not near genes chr3R 17423938 intergenic not near genes chr3R 17423999 intergenic not near genes chr3R_8_17420001 chr3R_17420001 RAL-45 1039 chr3R 17461198 17461232 chr3R 17461280 17461314 4 82 2.0 2.0 2.0 1.3 116 chr3R 17461198 intergenic not near genes chr3R 17461256 intergenic not near genes chr3R 17461314 intergenic not near genes chr3R_4_17460001 chr3R_17460001 RAL-45 1040 chr3R 17497964 17497978 chr3R 17498050 17498063 5 86 2.0 1.0 1.5 2.0 99 chr3R 17497964 intron Dscam3 - chr3R 17498014 intron Dscam3 - chr3R 17498063 intron Dscam3 - chr3R_5_17495001 chr3R_17495001 RAL-45 1041 chr3R 17521583 17521590 chr3R 17521726 17521735 5 153 0.5 7.0 3.8 1.0 152 chr3R 17521583 intergenic not near genes chr3R 17521659 intergenic not near genes chr3R 17521735 intergenic not near genes chr3R_5_17520001 chr3R_17520001 RAL-45 1042 chr3R 17584854 17584875 chr3R 17585026 17585041 6 168 2.0 1.5 1.8 2.1 187 chr3R 17584854 intergenic not near genes chr3R 17584948 intergenic not near genes chr3R 17585041 intergenic not near genes chr3R_6_17580001 chr3R_17580001 RAL-45 1043 chr3R 17591287 17591323 chr3R 17591723 17591759 F-element 4 432 2.0 1.0 1.5 1.6 472 chr3R 17591287 intergenic not near genes chr3R 17591523 intergenic not near genes chr3R 17591759 intergenic not near genes chr3R_4_17590001 chr3R_17590001 RAL-45 1044 chr3R 17734120 17734136 chr3R 17734208 17734225 5 85 4.5 4.5 4.5 0.9 105 chr3R 17734120 3` UTR CG14321 + chr3R 17734172 3` UTR CG14321 + chr3R 17734225 3` UTR CG14321 + chr3R_5_17730001 chr3R_17730001 RAL-45 1045 chr3R 17826770 17826798 chr3R 17827101 17827129 9 331 2.0 2.5 2.2 2.8 359 chr3R 17826770 intron tinc + chr3R 17826950 intron tinc + chr3R 17827129 intron tinc + chr3R_9_17825001 chr3R_17825001 RAL-45 1046 chr3R 17881889 17881902 chr3R 17881982 17881995 6 92 4.0 0.5 2.2 1.9 106 chr3R 17881889 exon Rim - chr3R 17881942 intron Rim - chr3R 17881995 intron Rim - chr3R_6_17880001 chr3R_17880001 RAL-45 1047 chr3R 17925852 17925889 chr3R 17927318 17927356 hobo 11 1465 2.0 3.0 2.5 3.1 1504 chr3R 17925852 intron cpo + chr3R 17926604 intron cpo + chr3R 17927356 intron cpo + chr3R_11_17925001 chr3R_17925001 RAL-45 1048 chr3R 18126211 18126214 chr3R 18126288 18126292 4 78 9.0 2.0 5.5 0.6 81 chr3R 18126211 intron sr + chr3R 18126252 intron sr + chr3R 18126292 intron sr + chr3R_4_18125001 chr3R_18125001 RAL-45 1049 chr3R 18126216 18126225 chr3R 18126287 18126304 4 77 8.0 2.0 5.0 0.7 88 chr3R 18126216 intron sr + chr3R 18126260 intron sr + chr3R 18126304 intron sr + chr3R_4_18125001 chr3R_18125001 RAL-45 1050 chr3R 18320736 18320763 chr3R 18320873 18320900 5 137 1.5 3.5 2.5 1.4 164 chr3R 18320736 intron CG31235 - chr3R 18320818 intron CG31235 - chr3R 18320900 intron CG31235 - chr3R_5_18320001 chr3R_18320001 RAL-45 1051 chr3R 18413838 18413865 chr3R 18415887 18415914 4 2049 20.0 9.5 14.8 0.3 2076 chr3R 18413838 intergenic fru - chr3R 18414876 3` UTR fru - chr3R 18415914 3` UTR fru - chr3R_4_18410001 chr3R_18410001 RAL-45 1052 chr3R 18501590 18501629 chr3R 18501671 18501710 5 81 0.5 2.5 1.5 2.0 120 chr3R 18501590 intron fru - chr3R 18501650 intron fru - chr3R 18501710 intron fru - chr3R_5_18500001 chr3R_18500001 RAL-45 1053 chr3R 18622800 18622808 chr3R 18622874 18622882 4 75 1.0 0.5 0.8 2.2 82 chr3R 18622800 intron qin + chr3R 18622841 intron qin + chr3R 18622882 intron qin + chr3R_4_18620001 chr3R_18620001 RAL-45 1054 chr3R 18720315 18720342 chr3R 18720402 18720435 8 94 2.5 3.5 3.0 2.0 120 chr3R 18720315 intron Cha + chr3R 18720375 intron Cha + chr3R 18720435 intron Cha + chr3R_8_18720001 chr3R_18720001 RAL-45 1055 chr3R 18791511 18791524 chr3R 18791575 18791596 4 69 0.0 1.5 0.8 2.2 85 chr3R 18791511 intron CG7720 - chr3R 18791554 intron CG7720 - chr3R 18791596 intron CG7720 - chr3R_4_18790001 chr3R_18790001 RAL-45 1056 chr3R 18808497 18808507 chr3R 18808557 18808584 4 67 3.0 5.5 4.2 0.8 87 chr3R 18808497 intron CG18208 - chr3R 18808540 intron CG18208 - chr3R 18808584 intron CG18208 - chr3R_4_18805001 chr3R_18805001 RAL-45 1057 chr3R 18812081 18812105 chr3R 18812159 18812183 12 78 3.5 5.0 4.2 2.3 102 chr3R 18812081 intron CG18208 - chr3R 18812132 intron CG18208 - chr3R 18812183 intron CG18208 - chr3R_12_18810001 chr3R_18810001 RAL-45 1058 chr3R 19060275 19060309 chr3R 19060363 19060388 13 87 0.0 1.5 0.8 7.2 113 chr3R 19060275 intron cdi - chr3R 19060332 intron cdi - chr3R 19060388 intron cdi - chr3R_13_19060001 chr3R_19060001 RAL-45 1059 chr3R 19106820 19106830 chr3R 19106910 19106920 4 90 5.0 0.0 2.5 1.1 100 chr3R 19106820 intron CG6040 + chr3R 19106870 intron CG6040 + chr3R 19106920 intron CG6040 + chr3R_4_19105001 chr3R_19105001 RAL-45 1060 chr3R 19278774 19278787 chr3R 19278850 19278863 4 76 0.5 3.5 2.0 1.3 89 chr3R 19278774 3` UTR CR44173 - chr3R 19278818 3` UTR CR44173 - chr3R 19278863 3` UTR CR44173 - chr3R_4_19275001 chr3R_19275001 RAL-45 1061 chr3R 19533375 19533402 chr3R 19533452 19533477 14 76 3.0 2.5 2.8 3.7 102 chr3R 19533375 intron Dys + chr3R 19533426 intron Dys + chr3R 19533477 intron Dys + chr3R_14_19530001 chr3R_19530001 RAL-45 1062 chr3R 19604683 19604707 chr3R 19604815 19604840 10 133 5.0 2.0 3.5 2.2 157 chr3R 19604683 exon CG7342 + chr3R 19604762 intron CG7342 + chr3R 19604840 intron CG7342 + chr3R_10_19600001 chr3R_19600001 RAL-45 1063 chr3R 19611998 19612007 chr3R 19616031 19616040 4 4033 12.0 5.5 8.8 0.4 4042 chr3R 19611998 exon CG17752 + chr3R 19614019 exon CG16727 + chr3R 19616040 3` UTR CG6231 - chr3R_4_19610001 chr3R_19610001 RAL-45 1064 chr3R 19678486 19678518 chr3R 19678578 19678610 12 92 0.0 1.5 0.8 6.7 124 chr3R 19678486 intron Naam + chr3R 19678548 intron Naam + chr3R 19678610 intron Naam + chr3R_12_19675001 chr3R_19675001 RAL-45 1065 chr3R 19825894 19825919 chr3R 19826538 19826563 10 644 5.5 0.5 3.0 2.5 669 chr3R 19825894 intron bnl - chr3R 19826228 intron bnl - chr3R 19826563 intron bnl - chr3R_10_19825001 chr3R_19825001 RAL-45 1066 chr3R 20020150 20020175 chr3R 20020292 20020306 7 138 1.5 1.5 1.5 2.8 156 chr3R 20020150 intron CG4433 - chr3R 20020228 intron CG4433 - chr3R 20020306 intron CG4433 - chr3R_7_20020001 chr3R_20020001 RAL-45 1067 chr3R 20109535 20109569 chr3R 20114741 20114775 copia 6 5206 0.5 0.5 0.5 4.0 5240 chr3R 20109535 intergenic not near genes chr3R 20112155 intergenic not near genes chr3R 20114775 intergenic CG10887 + chr3R_6_20110001 chr3R_20110001 RAL-45 1068 chr3R 20156705 20156710 chr3R 20165864 20165880 roo 5 9168 4.5 2.0 3.2 1.2 9175 chr3R 20156705 intergenic not near genes chr3R 20161292 intergenic not near genes chr3R 20165880 intergenic not near genes chr3R_5_20160001 chr3R_20160001 RAL-45 1069 chr3R 20175097 20175119 chr3R 20175173 20175202 4 81 1.5 1.5 1.5 1.6 105 chr3R 20175097 intergenic CG5023 + chr3R 20175150 intergenic CG5023 + chr3R 20175202 intergenic CG5023 + chr3R_4_20175001 chr3R_20175001 RAL-45 1070 chr3R 20201354 20201379 chr3R 20201440 20201464 10 85 1.5 1.0 1.2 4.5 110 chr3R 20201354 intergenic not near genes chr3R 20201409 intergenic not near genes chr3R 20201464 intergenic not near genes chr3R_10_20200001 chr3R_20200001 RAL-45 1071 chr3R 20237195 20237222 chr3R 20237274 20237297 7 77 4.0 4.0 4.0 1.4 102 chr3R 20237195 intron Nlg4 + chr3R 20237246 intron Nlg4 + chr3R 20237297 intron Nlg4 + chr3R_7_20235001 chr3R_20235001 RAL-45 1072 chr3R 20282291 20282307 chr3R 20282367 20282383 4 76 0.0 3.0 1.5 1.6 92 chr3R 20282291 intron cic + chr3R 20282337 intron cic + chr3R 20282383 intron cic + chr3R_4_20280001 chr3R_20280001 RAL-45 1073 chr3R 20286151 20286174 chr3R 20286258 20286281 4 106 3.5 0.0 1.8 1.4 130 chr3R 20286151 intron cic + chr3R 20286216 intron cic + chr3R 20286281 intron cic + chr3R_4_20285001 chr3R_20285001 RAL-45 1074 chr3R 20367364 20367378 chr3R 20367440 20367454 4 76 2.5 3.5 3.0 1.0 90 chr3R 20367364 intergenic not near genes chr3R 20367409 intergenic not near genes chr3R 20367454 intergenic not near genes chr3R_4_20365001 chr3R_20365001 RAL-45 1075 chr3R 20472726 20472754 chr3R 20472803 20472832 7 78 0.5 5.5 3.0 1.8 106 chr3R 20472726 intron Gfrl - chr3R 20472779 intron Gfrl - chr3R 20472832 intron Gfrl - chr3R_7_20470001 chr3R_20470001 RAL-45 1076 chr3R 20512348 20512366 chr3R 20512430 20512446 9 81 3.0 3.5 3.2 2.1 98 chr3R 20512348 5` UTR CG4288 - chr3R 20512397 5` UTR CG4288 - chr3R 20512446 5` UTR CG4288 - chr3R_9_20510001 chr3R_20510001 RAL-45 1077 chr3R 20722852 20722886 chr3R 20722979 20723013 8 127 1.0 2.5 1.8 2.9 161 chr3R 20722852 intergenic not near genes chr3R 20722932 intergenic not near genes chr3R 20723013 intergenic not near genes chr3R_8_20720001 chr3R_20720001 RAL-45 1078 chr3R 20870258 20870282 chr3R 20870343 20870367 11 84 1.5 3.5 2.5 3.1 109 chr3R 20870258 intergenic not near genes chr3R 20870312 intergenic not near genes chr3R 20870367 intergenic not near genes chr3R_11_20870001 chr3R_20870001 RAL-45 1079 chr3R 20929287 20929312 chr3R 20929379 20929404 4 92 0.0 1.0 0.5 2.7 117 chr3R 20929287 intron CG31191 - chr3R 20929346 intron CG31191 - chr3R 20929404 intron CG31191 - chr3R_4_20925001 chr3R_20925001 RAL-45 1080 chr3R 20966130 20966153 chr3R 20966213 20966236 5 83 0.0 0.5 0.2 4.2 106 chr3R 20966130 intron Atpalpha + chr3R 20966183 intron Atpalpha + chr3R 20966236 intron Atpalpha + chr3R_5_20965001 chr3R_20965001 RAL-45 1081 chr3R 21014012 21014043 chr3R 21014089 21014121 5 78 3.0 1.0 2.0 1.7 109 chr3R 21014012 3` UTR Calx + chr3R 21014066 3` UTR Calx + chr3R 21014121 3` UTR Calx + chr3R_5_21010001 chr3R_21010001 RAL-45 1082 chr3R 21141675 21141706 chr3R 21150154 21150180 Tirant 7 8479 2.5 4.0 3.2 1.7 8505 chr3R 21141675 intron SNF4Agamma + chr3R 21145928 intron SNF4Agamma + chr3R 21150180 intron SNF4Agamma + chr3R_7_21145001 chr3R_21145001 RAL-45 1083 chr3R 21154550 21154583 chr3R 21154755 21154798 4 212 1.5 0.0 0.8 2.2 248 chr3R 21154550 intron SNF4Agamma + chr3R 21154674 intron SNF4Agamma + chr3R 21154798 intron SNF4Agamma + chr3R_4_21150001 chr3R_21150001 RAL-45 1084 chr3R 21239806 21239959 chr3R 21239900 21240020 4 77 0.0 0.0 0.0 4.0 214 chr3R 21239806 intergenic not near genes chr3R 21239913 intergenic not near genes chr3R 21240020 intergenic not near genes chr3R_4_21235001 chr3R_21235001 RAL-45 1085 chr3R 21347027 21347056 chr3R 21347134 21347163 15 109 4.5 2.5 3.5 3.3 136 chr3R 21347027 intron CG16791 - chr3R 21347095 intron CG16791 - chr3R 21347163 intron CG16791 - chr3R_15_21345001 chr3R_21345001 RAL-45 1086 chr3R 21385698 21385961 chr3R 21385780 21386038 6 75 3.0 0.0 1.5 2.4 340 chr3R 21385698 intergenic not near genes chr3R 21385868 intergenic not near genes chr3R 21386038 intergenic not near genes chr3R_6_21385001 chr3R_21385001 RAL-45 1087 chr3R 21475999 21476020 chr3R 21476087 21476108 5 88 3.0 2.0 2.5 1.4 109 chr3R 21475999 intergenic not near genes chr3R 21476054 intergenic not near genes chr3R 21476108 intergenic not near genes chr3R_5_21475001 chr3R_21475001 RAL-45 1088 chr3R 21527820 21527828 chr3R 21528160 21528168 4 340 2.5 1.5 2.0 1.3 348 chr3R 21527820 3` UTR CG7956 + chr3R 21527994 3` UTR CG7956 + chr3R 21528168 3` UTR CG7956 + chr3R_4_21525001 chr3R_21525001 RAL-45 1089 chr3R 21759897 21759912 chr3R 21759997 21760023 6 107 2.5 4.0 3.2 1.4 126 chr3R 21759897 exon CG42335 + chr3R 21759960 exon CG42335 + chr3R 21760023 exon CG42335 + chr3R_6_21755001 chr3R_21755001 RAL-45 1090 chr3R 21761118 21761149 chr3R 21768510 21768540 mdg1 17 7388 4.5 5.0 4.8 2.9 7422 chr3R 21761118 exon CG42335 + chr3R 21764829 intron CG42335 + chr3R 21768540 exon CG42335 + chr3R_17_21760001 chr3R_21760001 RAL-45 1091 chr3R 21784861 21784872 chr3R 21784959 21784970 6 98 3.0 0.0 1.5 2.4 109 chr3R 21784861 3` UTR,3` UTR CASK -,CRG - chr3R 21784916 3` UTR,3` UTR CASK -,CRG - chr3R 21784970 3` UTR,3` UTR CASK -,CRG - chr3R_6_21780001 chr3R_21780001 RAL-45 1092 chr3R 21845892 21845900 chr3R 21846063 21846071 6 171 4.5 2.5 3.5 1.3 179 chr3R 21845892 5` UTR,exon CR44087 +,Gr93d - chr3R 21845982 intron,exon CR44087 +,Gr93d - chr3R 21846071 intron,exon CR44087 +,Gr93d - chr3R_6_21845001 chr3R_21845001 RAL-45 1093 chr3R 8339246 8339247 chr3R 21907534 21907534 9 13568288 16.0 21.0 18.5 0.5 13568288 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907534 intergenic CG6678 + chr3R_9_15120001 chr3R_15120001 RAL-45 1094 chr3R 21907534 21907534 chr3R 28831801 28831802 4 6924268 22.5 11.0 16.8 0.2 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_4_25365001 chr3R_25365001 RAL-45 1095 chr3R 8339246 8339247 chr3R 21907535 21907535 10 13568288 16.0 21.0 18.5 0.5 13568289 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907535 intergenic CG6678 + chr3R_10_15120001 chr3R_15120001 RAL-45 1096 chr3R 9620956 9620957 chr3R 21907535 21907535 6 12286579 8.5 21.0 14.8 0.4 12286579 chr3R 9620956 intron CG8312 + chr3R 15764246 intergenic not near genes chr3R 21907535 intergenic CG6678 + chr3R_6_15760001 chr3R_15760001 RAL-45 1097 chr3R 21907535 21907535 chr3R 28831801 28831802 20 6924266 22.0 11.0 16.5 1.1 6924267 chr3R 21907535 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_20_25365001 chr3R_25365001 RAL-45 1098 chr3R 21907536 21907536 chr3R 28831801 28831802 18 6924266 22.0 11.0 16.5 1.0 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_18_25365001 chr3R_25365001 RAL-45 1099 chr3R 21952140 21952166 chr3R 21952225 21952251 7 85 0.5 2.0 1.2 3.2 111 chr3R 21952140 intron Eip93F + chr3R 21952196 intron Eip93F + chr3R 21952251 intron Eip93F + chr3R_7_21950001 chr3R_21950001 RAL-45 1100 chr3R 22055566 22055589 chr3R 22055755 22055778 7 185 1.0 2.0 1.5 2.8 212 chr3R 22055566 intron how + chr3R 22055672 intron how + chr3R 22055778 intron how + chr3R_7_22055001 chr3R_22055001 RAL-45 1101 chr3R 22450552 22450578 chr3R 22453191 22453217 NOF 11 2640 2.0 4.0 3.0 2.8 2665 chr3R 22450552 intron CG34376 + chr3R 22451884 intron CG34376 + chr3R 22453217 intron CG34376 + chr3R_11_22450001 chr3R_22450001 RAL-45 1102 chr3R 22580651 22580674 chr3R 22580731 22580757 5 82 0.5 3.0 1.8 1.8 106 chr3R 22580651 intergenic CSN6 +,CG33110 + chr3R 22580704 intergenic CSN6 +,CG33110 + chr3R 22580757 intergenic CSN6 +,CG33110 + chr3R_5_22580001 chr3R_22580001 RAL-45 1103 chr3R 22769089 22769126 chr3R 22769166 22769203 5 76 2.0 2.0 2.0 1.7 114 chr3R 22769089 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769146 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769203 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_5_22765001 chr3R_22765001 RAL-45 1104 chr3R 22797763 22797774 chr3R 22797848 22797859 4 86 3.5 0.0 1.8 1.4 96 chr3R 22797763 intergenic not near genes chr3R 22797811 intergenic not near genes chr3R 22797859 intergenic not near genes chr3R_4_22795001 chr3R_22795001 RAL-45 1105 chr3R 22797775 22797934 chr3R 22797844 22798030 15 86 0.0 0.0 0.0 15.0 255 chr3R 22797775 intergenic not near genes chr3R 22797902 intergenic not near genes chr3R 22798030 intergenic not near genes chr3R_15_22795001 chr3R_22795001 RAL-45 1106 chr3R 22827414 22827449 chr3R 22827489 22827525 5 76 5.0 3.5 4.2 1.0 111 chr3R 22827414 intergenic CR44350 - chr3R 22827470 intergenic CR44350 - chr3R 22827525 intergenic CR44350 - chr3R_5_22825001 chr3R_22825001 RAL-45 1107 chr3R 22853293 22853297 chr3R 22853369 22853374 5 77 7.5 4.5 6.0 0.7 81 chr3R 22853293 intergenic not near genes chr3R 22853334 intergenic not near genes chr3R 22853374 intergenic not near genes chr3R_5_22850001 chr3R_22850001 RAL-45 1108 chr3R 22880938 22880959 chr3R 22881076 22881095 7 137 2.0 0.0 1.0 3.5 157 chr3R 22880938 intergenic not near genes chr3R 22881016 intergenic not near genes chr3R 22881095 intergenic not near genes chr3R_7_22880001 chr3R_22880001 RAL-45 1109 chr3R 22890424 22890444 chr3R 22890517 22890523 7 87 3.5 4.0 3.8 1.5 99 chr3R 22890424 intergenic not near genes chr3R 22890474 intergenic not near genes chr3R 22890523 intergenic not near genes chr3R_7_22890001 chr3R_22890001 RAL-45 1110 chr3R 22968664 22968695 chr3R 22968767 22968797 9 100 2.0 4.5 3.2 2.1 133 chr3R 22968664 intergenic not near genes chr3R 22968730 intergenic not near genes chr3R 22968797 intergenic not near genes chr3R_9_22965001 chr3R_22965001 RAL-45 1111 chr3R 22971243 22971271 chr3R 22971337 22971365 5 92 3.0 4.0 3.5 1.1 122 chr3R 22971243 intergenic not near genes chr3R 22971304 intergenic not near genes chr3R 22971365 intergenic not near genes chr3R_5_22970001 chr3R_22970001 RAL-45 1112 chr3R 22979767 22979773 chr3R 22979834 22979849 5 75 7.5 3.0 5.2 0.8 82 chr3R 22979767 intergenic not near genes chr3R 22979808 intergenic not near genes chr3R 22979849 intergenic not near genes chr3R_5_22975001 chr3R_22975001 RAL-45 1113 chr3R 23073654 23073680 chr3R 23073743 23073769 8 89 2.0 1.5 1.8 2.9 115 chr3R 23073654 intron CG13830 - chr3R 23073712 intron CG13830 - chr3R 23073769 intron CG13830 - chr3R_8_23070001 chr3R_23070001 RAL-45 1114 chr3R 23242297 23242320 chr3R 23242377 23242398 5 79 6.0 3.0 4.5 0.9 101 chr3R 23242297 intron CG4467 - chr3R 23242348 intron CG4467 - chr3R 23242398 intron CG4467 - chr3R_5_23240001 chr3R_23240001 RAL-45 1115 chr3R 23246007 23246026 chr3R 23246078 23246097 7 76 0.5 2.5 1.5 2.8 90 chr3R 23246007 intron CG4467 - chr3R 23246052 intron CG4467 - chr3R 23246097 intron CG4467 - chr3R_7_23245001 chr3R_23245001 RAL-45 1116 chr3R 23421979 23422009 chr3R 23422063 23422094 9 82 1.0 3.0 2.0 3.0 115 chr3R 23421979 intron CG4374 - chr3R 23422036 intron CG4374 - chr3R 23422094 intron CG4374 - chr3R_9_23420001 chr3R_23420001 RAL-45 1117 chr3R 23572760 23572780 chr3R 23572880 23572893 8 119 3.5 2.5 3.0 2.0 133 chr3R 23572760 intron beat-IV + chr3R 23572826 intron beat-IV + chr3R 23572893 intron beat-IV + chr3R_8_23570001 chr3R_23570001 RAL-45 1118 chr3R 23582797 23582830 chr3R 23582883 23582912 7 85 2.5 3.5 3.0 1.8 115 chr3R 23582797 intergenic not near genes chr3R 23582854 intergenic not near genes chr3R 23582912 intergenic not near genes chr3R_7_23580001 chr3R_23580001 RAL-45 1119 chr3R 23626141 23626159 chr3R 23626235 23626253 5 94 2.0 1.0 1.5 2.0 112 chr3R 23626141 intron CG31145 - chr3R 23626197 intron CG31145 - chr3R 23626253 intron CG31145 - chr3R_5_23625001 chr3R_23625001 RAL-45 1120 chr3R 23684707 23684720 chr3R 23685190 23685197 roo 7 481 5.0 8.5 6.8 0.9 490 chr3R 23684707 intron CG18754 + chr3R 23684952 intron CG18754 + chr3R 23685197 exon CG18754 + chr3R_7_23680001 chr3R_23680001 RAL-45 1121 chr3R 23784903 23785194 chr3R 23784973 23785272 22 76 3.5 4.0 3.8 4.6 369 chr3R 23784903 intron mbc + chr3R 23785088 intron mbc + chr3R 23785272 intron mbc + chr3R_22_23785001 chr3R_23785001 RAL-45 1122 chr3R 23884293 23884326 chr3R 23884377 23884410 7 84 4.5 3.0 3.8 1.5 117 chr3R 23884293 intron Pli - chr3R 23884352 intron Pli - chr3R 23884410 intron Pli - chr3R_7_23880001 chr3R_23880001 RAL-45 1123 chr3R 23938681 23938695 chr3R 23939111 23939126 4 428 3.5 2.5 3.0 1.0 445 chr3R 23938681 intron Gdh - chr3R 23938904 intron Gdh - chr3R 23939126 intron Gdh - chr3R_4_23935001 chr3R_23935001 RAL-45 1124 chr3R 23944923 23944935 chr3R 23945008 23945020 8 85 2.0 9.0 5.5 1.2 97 chr3R 23944923 intron CG12268 - chr3R 23944972 intron CG12268 - chr3R 23945020 exon CG12268 - chr3R_8_23940001 chr3R_23940001 RAL-45 1125 chr3R 24072085 24072101 chr3R 24072523 24072539 jockey 7 437 9.0 0.5 4.8 1.2 454 chr3R 24072085 intron 4EHP - chr3R 24072312 intron 4EHP - chr3R 24072539 intron 4EHP - chr3R_7_24070001 chr3R_24070001 RAL-45 1126 chr3R 24074577 24074584 chr3R 24074653 24074659 5 76 2.5 2.5 2.5 1.4 82 chr3R 24074577 intron 4EHP - chr3R 24074618 intron 4EHP - chr3R 24074659 intron 4EHP - chr3R_5_24070001 chr3R_24070001 RAL-45 1127 chr3R 24076914 24076948 chr3R 24078381 24078415 hobo 7 1467 2.0 4.0 3.0 1.8 1501 chr3R 24076914 intron 4EHP - chr3R 24077664 intron 4EHP - chr3R 24078415 intron 4EHP - chr3R_7_24075001 chr3R_24075001 RAL-45 1128 chr3R 24199748 24199765 chr3R 24199828 24199845 5 80 1.5 3.0 2.2 1.6 97 chr3R 24199748 intron twin - chr3R 24199796 intron twin - chr3R 24199845 intron twin - chr3R_5_24195001 chr3R_24195001 RAL-45 1129 chr3R 24207217 24207238 chr3R 24212292 24212314 flea 9 5076 7.0 2.5 4.8 1.6 5097 chr3R 24207217 intron twin - chr3R 24209766 intron twin - chr3R 24212314 intron twin - chr3R_9_24205001 chr3R_24205001 RAL-45 1130 chr3R 24496478 24496491 chr3R 24496560 24496564 6 79 9.5 4.5 7.0 0.8 86 chr3R 24496478 intergenic not near genes chr3R 24496521 intergenic not near genes chr3R 24496564 intergenic not near genes chr3R_6_24495001 chr3R_24495001 RAL-45 1131 chr3R 24496492 24496509 chr3R 24496559 24496567 5 68 4.0 3.5 3.8 1.0 75 chr3R 24496492 intergenic not near genes chr3R 24496530 intergenic not near genes chr3R 24496567 intergenic not near genes chr3R_5_24495001 chr3R_24495001 RAL-45 1132 chr3R 24730090 24730125 chr3R 24732468 24732469 Doc 12 2375 2.0 0.5 1.2 5.5 2379 chr3R 24730090 intron tok + chr3R 24731280 intron tok + chr3R 24732469 intron tok + chr3R_12_24730001 chr3R_24730001 RAL-45 1133 chr3R 24961257 24961281 chr3R 24961374 24961398 5 117 1.0 1.0 1.0 2.5 141 chr3R 24961257 intergenic not near genes chr3R 24961328 intergenic not near genes chr3R 24961398 intergenic not near genes chr3R_5_24960001 chr3R_24960001 RAL-45 1134 chr3R 24974914 24974936 chr3R 24974993 24975015 8 79 2.5 4.5 3.5 1.8 101 chr3R 24974914 intergenic not near genes chr3R 24974964 intergenic not near genes chr3R 24975015 intergenic not near genes chr3R_8_24970001 chr3R_24970001 RAL-45 1135 chr3R 25004900 25004921 chr3R 25004983 25004984 7 79 0.0 3.5 1.8 2.5 84 chr3R 25004900 intron tnc + chr3R 25004942 intron tnc + chr3R 25004984 intron tnc + chr3R_7_25000001 chr3R_25000001 RAL-45 1136 chr3R 25268059 25268067 chr3R 25272649 25272656 5 4590 13.0 28.0 20.5 0.2 4597 chr3R 25268059 intron CR45214 - chr3R 25270358 exon,5` UTR CG11889 +,CG11891 + chr3R 25272656 3` UTR,exon CG11889 +,CG11891 + chr3R_5_25270001 chr3R_25270001 RAL-45 1137 chr3R 25296168 25296192 chr3R 25296249 25296273 7 81 1.5 1.0 1.2 3.2 105 chr3R 25296168 3` UTR CG31097 - chr3R 25296220 3` UTR CG31097 - chr3R 25296273 3` UTR CG31097 - chr3R_7_25295001 chr3R_25295001 RAL-45 1138 chr3R 25422061 25422092 chr3R 25422142 25422173 5 81 0.0 0.0 0.0 5.0 112 chr3R 25422061 intron Fur1 - chr3R 25422117 intron Fur1 - chr3R 25422173 intron Fur1 - chr3R_5_25420001 chr3R_25420001 RAL-45 1139 chr3R 25464492 25464520 chr3R 25464809 25464837 4 317 1.0 3.0 2.0 1.3 345 chr3R 25464492 intron Fur1 - chr3R 25464664 intron Fur1 - chr3R 25464837 intron Fur1 - chr3R_4_25460001 chr3R_25460001 RAL-45 1140 chr3R 25573658 25573686 chr3R 25573750 25573778 7 91 3.0 2.5 2.8 1.8 120 chr3R 25573658 intron msi + chr3R 25573718 intron msi + chr3R 25573778 intron msi + chr3R_7_25570001 chr3R_25570001 RAL-45 1141 chr3R 25723360 25723388 chr3R 25723455 25723483 8 95 4.0 1.0 2.5 2.3 123 chr3R 25723360 intron LpR2 - chr3R 25723422 intron LpR2 - chr3R 25723483 intron LpR2 - chr3R_8_25720001 chr3R_25720001 RAL-45 1142 chr3R 25755741 25755774 chr3R 25755829 25755862 6 88 0.5 1.0 0.8 3.3 121 chr3R 25755741 intron LpR1 - chr3R 25755802 intron LpR1 - chr3R 25755862 intron LpR1 - chr3R_6_25755001 chr3R_25755001 RAL-45 1143 chr3R 25801267 25801283 chr3R 25802251 25802267 4 984 1.0 4.5 2.8 1.1 1000 chr3R 25801267 intergenic not near genes chr3R 25801767 intergenic not near genes chr3R 25802267 intergenic not near genes chr3R_4_25800001 chr3R_25800001 RAL-45 1144 chr3R 25832696 25832716 chr3R 25841878 25841898 roo 9 9182 6.0 6.0 6.0 1.3 9202 chr3R 25832696 exon alpha4GT2 + chr3R 25837297 intron alpha4GT2 + chr3R 25841898 exon alpha4GT2 + chr3R_9_25835001 chr3R_25835001 RAL-45 1145 chr3R 26010181 26010204 chr3R 26010251 26010280 15 76 4.5 5.5 5.0 2.5 99 chr3R 26010181 intergenic not near genes chr3R 26010230 intergenic not near genes chr3R 26010280 intergenic not near genes chr3R_15_26010001 chr3R_26010001 RAL-45 1146 chr3R 26060406 26060434 chr3R 26060492 26060520 7 86 4.5 1.5 3.0 1.8 114 chr3R 26060406 intron CG14544 + chr3R 26060463 intron CG14544 + chr3R 26060520 intron CG14544 + chr3R_7_26060001 chr3R_26060001 RAL-45 1147 chr3R 26108824 26108844 chr3R 26117407 26117423 Tirant 7 8582 4.0 0.0 2.0 2.3 8599 chr3R 26108824 5` UTR CG31324 + chr3R 26113124 intron CG31324 + chr3R 26117423 intron CG31324 + chr3R_7_26110001 chr3R_26110001 RAL-45 1148 chr3R 26122470 26122479 chr3R 26122546 26122555 6 76 3.5 3.0 3.2 1.4 85 chr3R 26122470 intron CG31324 + chr3R 26122512 intron CG31324 + chr3R 26122555 intron CG31324 + chr3R_6_26120001 chr3R_26120001 RAL-45 1149 chr3R 26235492 26235521 chr3R 26235571 26235602 8 80 2.5 2.5 2.5 2.3 110 chr3R 26235492 5` UTR CR42745 + chr3R 26235547 5` UTR CR42745 + chr3R 26235602 5` UTR CR42745 + chr3R_8_26235001 chr3R_26235001 RAL-45 1150 chr3R 26294715 26294742 chr3R 26294793 26294820 7 78 1.0 0.5 0.8 3.9 105 chr3R 26294715 intergenic not near genes chr3R 26294768 intergenic not near genes chr3R 26294820 intergenic not near genes chr3R_7_26290001 chr3R_26290001 RAL-45 1151 chr3R 26376325 26376358 chr3R 26385485 26385516 roo 9 9160 4.0 0.0 2.0 3.0 9191 chr3R 26376325 intergenic not near genes chr3R 26380920 intergenic not near genes chr3R 26385516 intergenic not near genes chr3R_9_26380001 chr3R_26380001 RAL-45 1152 chr3R 26542044 26542079 chr3R 26542135 26542170 10 88 2.0 3.5 2.8 2.6 126 chr3R 26542044 intron scrib + chr3R 26542107 intron scrib + chr3R 26542170 intron scrib + chr3R_10_26540001 chr3R_26540001 RAL-45 1153 chr3R 26623649 26623671 chr3R 26623733 26623737 5 77 2.0 1.5 1.8 1.8 88 chr3R 26623649 intergenic TwdlB - chr3R 26623693 intergenic TwdlB - chr3R 26623737 intergenic TwdlB - chr3R_5_26620001 chr3R_26620001 RAL-45 1154 chr3R 26642733 26642757 chr3R 26643126 26643151 jockey 5 394 0.5 1.0 0.8 2.8 418 chr3R 26642733 intergenic not near genes chr3R 26642942 intergenic not near genes chr3R 26643151 intergenic not near genes chr3R_5_26640001 chr3R_26640001 RAL-45 1155 chr3R 26651534 26651548 chr3R 26651619 26651633 6 84 0.0 1.0 0.5 4.0 99 chr3R 26651534 intron beat-VII - chr3R 26651584 intron beat-VII - chr3R 26651633 intron beat-VII - chr3R_6_26650001 chr3R_26650001 RAL-45 1156 chr3R 26810552 26810579 chr3R 26811037 26811064 roo 7 485 4.0 3.5 3.8 1.5 512 chr3R 26810552 intron Tl + chr3R 26810808 intron Tl + chr3R 26811064 intron Tl + chr3R_7_26810001 chr3R_26810001 RAL-45 1157 chr3R 27019516 27019543 chr3R 27019606 27019606 10 92 1.5 3.0 2.2 3.1 90 chr3R 27019516 intron,exon RYa-R +,CG17191 - chr3R 27019561 intron,exon RYa-R +,CG17191 - chr3R 27019606 intron,exon RYa-R +,CG17191 - chr3R_10_27015001 chr3R_27015001 RAL-45 1158 chr3R 27073663 27073684 chr3R 27073746 27073767 4 82 2.0 0.5 1.2 1.8 104 chr3R 27073663 intergenic not near genes chr3R 27073715 intergenic not near genes chr3R 27073767 intergenic not near genes chr3R_4_27070001 chr3R_27070001 RAL-45 1159 chr3R 27101551 27101563 chr3R 27101657 27101669 6 106 0.5 3.0 1.8 2.1 118 chr3R 27101551 exon CG17189 + chr3R 27101610 intron CG17189 + chr3R 27101669 intron CG17189 + chr3R_6_27100001 chr3R_27100001 RAL-45 1160 chr3R 27140522 27140531 chr3R 27148132 27148141 412 4 7610 3.5 3.5 3.5 0.9 7619 chr3R 27140522 intron CG6051 - chr3R 27144332 intron CG6051 - chr3R 27148141 intron CG6051 - chr3R_4_27140001 chr3R_27140001 RAL-45 1161 chr3R 27140533 27140541 chr3R 27148124 27148150 412 6 7606 2.0 2.0 2.0 2.0 7617 chr3R 27140533 intron CG6051 - chr3R 27144342 intron CG6051 - chr3R 27148150 intron CG6051 - chr3R_6_27140001 chr3R_27140001 RAL-45 1162 chr3R 27200158 27200176 chr3R 27200245 27200263 8 86 7.5 5.0 6.2 1.1 105 chr3R 27200158 intergenic not near genes chr3R 27200210 intergenic not near genes chr3R 27200263 intergenic not near genes chr3R_8_27200001 chr3R_27200001 RAL-45 1163 chr3R 27200178 27200191 chr3R 27200242 27200279 11 82 3.5 4.5 4.0 2.2 101 chr3R 27200178 intergenic not near genes chr3R 27200228 intergenic not near genes chr3R 27200279 intergenic not near genes chr3R_11_27200001 chr3R_27200001 RAL-45 1164 chr3R 27279629 27279646 chr3R 27279705 27279712 8 77 3.5 2.0 2.8 2.1 83 chr3R 27279629 exon mrt - chr3R 27279670 exon mrt - chr3R 27279712 exon mrt - chr3R_8_27275001 chr3R_27275001 RAL-45 1165 chr3R 27292284 27292291 chr3R 27292396 27292403 5 112 4.5 4.5 4.5 0.9 119 chr3R 27292284 intergenic CG3348 - chr3R 27292344 intergenic CG3348 - chr3R 27292403 intergenic CG3348 - chr3R_5_27290001 chr3R_27290001 RAL-45 1166 chr3R 27327426 27327458 chr3R 27327505 27327537 11 78 0.5 2.0 1.2 5.0 111 chr3R 27327426 intergenic not near genes chr3R 27327482 intergenic not near genes chr3R 27327537 intergenic not near genes chr3R_11_27325001 chr3R_27325001 RAL-45 1167 chr3R 27342798 27342804 chr3R 27351379 27351385 Tirant 5 8581 6.0 2.0 4.0 1.0 8587 chr3R 27342798 intron CG42534 + chr3R 27347092 intron CG42534 + chr3R 27351385 intron CG42534 + chr3R_5_27345001 chr3R_27345001 RAL-45 1168 chr3R 27460278 27460299 chr3R 27460373 27460383 6 95 2.0 8.5 5.2 1.0 105 chr3R 27460278 intergenic not near genes chr3R 27460330 intergenic not near genes chr3R 27460383 intergenic not near genes chr3R_6_27460001 chr3R_27460001 RAL-45 1169 chr3R 27492381 27492410 chr3R 27492468 27492497 7 87 2.0 0.0 1.0 3.5 116 chr3R 27492381 intergenic not near genes chr3R 27492439 intergenic not near genes chr3R 27492497 intergenic not near genes chr3R_7_27490001 chr3R_27490001 RAL-45 1170 chr3R 27570269 27570294 chr3R 27570354 27570379 7 84 4.0 1.5 2.8 1.8 110 chr3R 27570269 intron wdb - chr3R 27570324 intron wdb - chr3R 27570379 intron wdb - chr3R_7_27570001 chr3R_27570001 RAL-45 1171 chr3R 27574108 27574131 chr3R 27574499 27574530 7 397 3.0 2.5 2.8 1.8 422 chr3R 27574108 intron wdb - chr3R 27574319 intron wdb - chr3R 27574530 intron wdb - chr3R_7_27570001 chr3R_27570001 RAL-45 1172 chr3R 27594735 27594769 chr3R 27594820 27594853 12 85 0.5 2.5 1.5 4.8 118 chr3R 27594735 intron CG5639 - chr3R 27594794 intron CG5639 - chr3R 27594853 intron CG5639 - chr3R_12_27590001 chr3R_27590001 RAL-45 1173 chr3R 27619702 27619731 chr3R 27619817 27619846 10 115 2.0 1.5 1.8 3.6 144 chr3R 27619702 intron Tusp + chr3R 27619774 intron Tusp + chr3R 27619846 intron Tusp + chr3R_10_27615001 chr3R_27615001 RAL-45 1174 chr3R 27679941 27679964 chr3R 27680063 27680087 4 122 6.0 2.5 4.2 0.8 146 chr3R 27679941 exon CG12883 + chr3R 27680014 3` UTR CG12883 + chr3R 27680087 3` UTR CG12883 + chr3R_4_27680001 chr3R_27680001 RAL-45 1175 chr3R 27705358 27705391 chr3R 27705438 27705471 15 79 3.0 2.5 2.8 3.9 113 chr3R 27705358 exon CG12428 - chr3R 27705414 intron CG12428 - chr3R 27705471 exon CG12428 - chr3R_15_27705001 chr3R_27705001 RAL-45 1176 chr3R 27731204 27731230 chr3R 27731278 27731311 17 77 1.5 5.5 3.5 3.8 107 chr3R 27731204 intergenic not near genes chr3R 27731258 intergenic not near genes chr3R 27731311 intergenic not near genes chr3R_17_27730001 chr3R_27730001 RAL-45 1177 chr3R 27779271 27779285 chr3R 27779351 27779363 4 80 3.0 9.0 6.0 0.6 92 chr3R 27779271 exon CG34353 - chr3R 27779317 intron CG34353 - chr3R 27779363 intron CG34353 - chr3R_4_27775001 chr3R_27775001 RAL-45 1178 chr3R 27799939 27799964 chr3R 27800021 27800046 6 82 2.0 2.0 2.0 2.0 107 chr3R 27799939 intron CG34353 - chr3R 27799992 intron CG34353 - chr3R 27800046 intron CG34353 - chr3R_6_27795001 chr3R_27795001 RAL-45 1179 chr3R 27840253 27840255 chr3R 27840375 27840377 4 122 0.0 0.0 0.0 4.0 124 chr3R 27840253 intron CG34353 - chr3R 27840315 intron CG34353 - chr3R 27840377 intron CG34353 - chr3R_4_27840001 chr3R_27840001 RAL-45 1180 chr3R 27856758 27856781 chr3R 27858240 27858264 hopper2 8 1483 4.0 3.0 3.5 1.8 1506 chr3R 27856758 intron CG34353 - chr3R 27857511 intron CG34353 - chr3R 27858264 intron CG34353 - chr3R_8_27855001 chr3R_27855001 RAL-45 1181 chr3R 27875709 27875726 chr3R 27882764 27882781 297 7 7055 5.0 2.5 3.8 1.5 7072 chr3R 27875709 intron CG34353 - chr3R 27879245 intron CG34353 - chr3R 27882781 intron CG34353 - chr3R_7_27875001 chr3R_27875001 RAL-45 1182 chr3R 28061401 28061432 chr3R 28061481 28061485 13 71 3.0 3.0 3.0 3.2 84 chr3R 28061401 intron CG34362 + chr3R 28061443 intron CG34362 + chr3R 28061485 intron CG34362 + chr3R_13_28060001 chr3R_28060001 RAL-45 1183 chr3R 28068490 28068531 chr3R 28073932 28073973 I-element 7 5442 1.0 1.0 1.0 3.5 5483 chr3R 28068490 intron CG34362 + chr3R 28071232 intron CG34362 + chr3R 28073973 intron CG34362 + chr3R_7_28070001 chr3R_28070001 RAL-45 1184 chr3R 28103332 28103354 chr3R 28103415 28103447 6 91 1.5 3.5 2.5 1.7 115 chr3R 28103332 intergenic not near genes chr3R 28103390 intergenic not near genes chr3R 28103447 intergenic not near genes chr3R_6_28100001 chr3R_28100001 RAL-45 1185 chr3R 28118857 28118879 chr3R 28118938 28118960 5 81 1.5 1.5 1.5 2.0 103 chr3R 28118857 intergenic not near genes chr3R 28118908 intergenic not near genes chr3R 28118960 intergenic not near genes chr3R_5_28115001 chr3R_28115001 RAL-45 1186 chr3R 28139663 28139672 chr3R 28139749 28139757 4 86 4.0 2.5 3.2 1.0 94 chr3R 28139663 intergenic not near genes chr3R 28139710 intergenic not near genes chr3R 28139757 intergenic not near genes chr3R_4_28135001 chr3R_28135001 RAL-45 1187 chr3R 28173682 28173703 chr3R 28181112 28181133 mdg1 9 7430 2.0 0.5 1.2 4.1 7451 chr3R 28173682 intron CG34354 + chr3R 28177408 intron CG34354 + chr3R 28181133 intron CG34354 + chr3R_9_28175001 chr3R_28175001 RAL-45 1188 chr3R 28210943 28210960 chr3R 28211280 28211297 4 337 0.5 3.5 2.0 1.3 354 chr3R 28210943 intron CG34354 + chr3R 28211120 intron CG34354 + chr3R 28211297 intron CG34354 + chr3R_4_28210001 chr3R_28210001 RAL-45 1189 chr3R 28253333 28253355 chr3R 28255841 28255865 jockey 7 2510 5.0 2.5 3.8 1.5 2532 chr3R 28253333 intergenic not near genes chr3R 28254599 intergenic not near genes chr3R 28255865 intergenic not near genes chr3R_7_28250001 chr3R_28250001 RAL-45 1190 chr3R 28368979 28369014 chr3R 28369057 28369098 5 83 4.0 0.0 2.0 1.7 119 chr3R 28368979 intergenic not near genes chr3R 28369038 intergenic not near genes chr3R 28369098 intergenic not near genes chr3R_5_28365001 chr3R_28365001 RAL-45 1191 chr3R 28390116 28390140 chr3R 28390194 28390218 6 78 3.5 2.5 3.0 1.5 102 chr3R 28390116 intergenic not near genes chr3R 28390167 intergenic not near genes chr3R 28390218 intergenic not near genes chr3R_6_28390001 chr3R_28390001 RAL-45 1192 chr3R 28393704 28393732 chr3R 28393804 28393831 7 100 1.0 1.0 1.0 3.5 127 chr3R 28393704 intergenic not near genes chr3R 28393768 intergenic not near genes chr3R 28393831 intergenic not near genes chr3R_7_28390001 chr3R_28390001 RAL-45 1193 chr3R 28407710 28407740 chr3R 28407796 28407826 10 86 2.0 5.0 3.5 2.2 116 chr3R 28407710 intergenic not near genes chr3R 28407768 intergenic not near genes chr3R 28407826 intergenic not near genes chr3R_10_28405001 chr3R_28405001 RAL-45 1194 chr3R 28484354 28484374 chr3R 28486271 28486292 26 1918 22.0 50.0 36.0 0.7 1938 chr3R 28484354 intergenic CG1894 + chr3R 28485323 exon CG1894 + chr3R 28486292 intergenic CG1894 + chr3R_26_28485001 chr3R_28485001 RAL-45 1195 chr3R 28625478 28625511 chr3R 28625569 28625601 13 88 4.5 3.0 3.8 2.7 123 chr3R 28625478 intron CG10011 - chr3R 28625540 intron CG10011 - chr3R 28625601 intron CG10011 - chr3R_13_28625001 chr3R_28625001 RAL-45 1196 chr3R 28702938 28702960 chr3R 28703022 28703044 7 84 4.0 8.0 6.0 1.0 106 chr3R 28702938 intron htt + chr3R 28702991 intron htt + chr3R 28703044 intron htt + chr3R_7_28700001 chr3R_28700001 RAL-45 1197 chr3R 28753313 28753330 chr3R 28755104 28755133 7 1801 5.5 1.0 3.2 1.7 1820 chr3R 28753313 intergenic not near genes chr3R 28754223 intergenic not near genes chr3R 28755133 intergenic CG9997 - chr3R_7_28750001 chr3R_28750001 RAL-45 1198 chr3R 28758283 28758304 chr3R 28763900 28763921 roo 5 5617 2.0 1.0 1.5 2.0 5638 chr3R 28758283 intergenic aqrs - chr3R 28761102 intergenic not near genes chr3R 28763921 intergenic not near genes chr3R_5_28760001 chr3R_28760001 RAL-45 1199 chr3R 28785387 28785402 chr3R 28785471 28785487 6 84 4.5 1.5 3.0 1.5 100 chr3R 28785387 intergenic not near genes chr3R 28785437 intergenic not near genes chr3R 28785487 intergenic not near genes chr3R_6_28785001 chr3R_28785001 RAL-45 1200 chr3R 28785403 28785413 chr3R 28785467 28785496 6 80 2.5 1.0 1.8 2.1 93 chr3R 28785403 intergenic not near genes chr3R 28785450 intergenic not near genes chr3R 28785496 intergenic not near genes chr3R_6_28785001 chr3R_28785001 RAL-45 1201 chr3R 28792884 28792898 chr3R 28797969 28797993 jockey 5 5093 2.5 3.5 3.0 1.2 5109 chr3R 28792884 intergenic not near genes chr3R 28795438 intergenic not near genes chr3R 28797993 intergenic not near genes chr3R_5_28795001 chr3R_28795001 RAL-45 1202 chr3R 28830885 28830922 chr3R 28830963 28830999 4 78 0.5 1.5 1.0 2.0 114 chr3R 28830885 intron WASp - chr3R 28830942 intron WASp - chr3R 28830999 intron WASp - chr3R_4_28830001 chr3R_28830001 RAL-45 1203 chr3R 21907534 21907535 chr3R 28831798 28831803 50 6924266 22.0 11.0 16.5 2.9 6924269 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831803 intron WASp - chr3R_50_25365001 chr3R_25365001 RAL-45 1204 chr3R 28947973 28947999 chr3R 28948085 28948104 9 111 2.0 2.5 2.2 2.8 131 chr3R 28947973 intron CG14521 - chr3R 28948038 intron CG14521 - chr3R 28948104 intron CG14521 - chr3R_9_28945001 chr3R_28945001 RAL-45 1205 chr3R 29034482 29034493 chr3R 29034565 29034576 4 82 0.0 7.0 3.5 0.9 94 chr3R 29034482 intergenic Cpsf100 +,CR45044 +,beta4GalNAcTB - chr3R 29034529 intergenic Cpsf100 +,CR45044 + chr3R 29034576 5` UTR Cpsf100 + chr3R_4_29030001 chr3R_29030001 RAL-45 1206 chr3R 29237250 29237280 chr3R 29239270 29239301 7 2021 9.5 6.5 8.0 0.8 2051 chr3R 29237250 exon CG11951 - chr3R 29238276 intron CG11951 - chr3R 29239301 exon CG31427 - chr3R_7_29235001 chr3R_29235001 RAL-45 1207 chr3R 29242595 29242650 chr3R 29247169 29247250 4 4587 22.5 25.0 23.8 0.2 4655 chr3R 29242595 exon CG31445 - chr3R 29244922 intergenic SP1029 -,CG31445 - chr3R 29247250 exon SP1029 - chr3R_4_29240001 chr3R_29240001 RAL-45 1208 chr3R 29351732 29351751 chr3R 29351816 29351836 9 85 5.0 2.5 3.8 1.9 104 chr3R 29351732 intergenic not near genes chr3R 29351784 intergenic not near genes chr3R 29351836 intergenic not near genes chr3R_9_29350001 chr3R_29350001 RAL-45 1209 chr3R 29406630 29406645 chr3R 29407898 29407931 jockey 9 1282 3.0 3.5 3.2 2.1 1301 chr3R 29406630 intron Ptp99A + chr3R 29407280 intron Ptp99A + chr3R 29407931 intron Ptp99A + chr3R_9_29405001 chr3R_29405001 RAL-45 1210 chr3R 29472007 29472038 chr3R 29472100 29472127 9 92 2.0 2.5 2.2 2.8 120 chr3R 29472007 intron Ptp99A + chr3R 29472067 intron Ptp99A + chr3R 29472127 intron Ptp99A + chr3R_9_29470001 chr3R_29470001 RAL-45 1211 chr3R 29539445 29539455 chr3R 29539521 29539531 6 76 2.0 0.0 1.0 3.0 86 chr3R 29539445 intergenic not near genes chr3R 29539488 intergenic not near genes chr3R 29539531 intergenic not near genes chr3R_6_29535001 chr3R_29535001 RAL-45 1212 chr3R 29552082 29552119 chr3R 29552197 29552205 7 111 2.0 3.5 2.8 1.8 123 chr3R 29552082 intergenic not near genes chr3R 29552144 intergenic not near genes chr3R 29552205 intergenic not near genes chr3R_7_29550001 chr3R_29550001 RAL-45 1213 chr3R 29573055 29573083 chr3R 29573237 29573271 10 186 3.0 2.0 2.5 2.9 216 chr3R 29573055 intergenic not near genes chr3R 29573163 intergenic not near genes chr3R 29573271 intergenic not near genes chr3R_10_29570001 chr3R_29570001 RAL-45 1214 chr3R 29609164 29609199 chr3R 29609253 29609288 8 89 3.0 1.5 2.2 2.5 124 chr3R 29609164 intron alph + chr3R 29609226 intron alph + chr3R 29609288 intron alph + chr3R_8_29605001 chr3R_29605001 RAL-45 1215 chr3R 29621075 29621078 chr3R 29621161 29621163 4 86 2.5 4.0 3.2 1.0 88 chr3R 29621075 intergenic CG1907 + chr3R 29621119 intergenic CG1907 + chr3R 29621163 intergenic CG1907 + chr3R_4_29620001 chr3R_29620001 RAL-45 1216 chr3R 29623599 29623624 chr3R 29623683 29623708 7 83 3.5 2.5 3.0 1.8 109 chr3R 29623599 intergenic not near genes chr3R 29623654 intergenic not near genes chr3R 29623708 intergenic not near genes chr3R_7_29620001 chr3R_29620001 RAL-45 1217 chr3R 29831810 29831840 chr3R 29831894 29831924 14 84 3.0 2.5 2.8 3.7 114 chr3R 29831810 exon Atg16 - chr3R 29831867 intron Atg16 - chr3R 29831924 exon Atg16 - chr3R_14_29830001 chr3R_29830001 RAL-45 1218 chr3R 29880583 29880608 chr3R 29880668 29880693 4 82 4.0 1.0 2.5 1.1 110 chr3R 29880583 intron CG31038 + chr3R 29880638 intron CG31038 + chr3R 29880693 intron CG31038 + chr3R_4_29880001 chr3R_29880001 RAL-45 1219 chr3R 29950576 29950598 chr3R 29950651 29950657 6 70 2.0 1.0 1.5 2.4 81 chr3R 29950576 intergenic TkR99D - chr3R 29950616 intergenic TkR99D - chr3R 29950657 intergenic TkR99D - chr3R_6_29950001 chr3R_29950001 RAL-45 1220 chr3R 29966065 29966074 chr3R 29966142 29966148 6 75 1.5 6.0 3.8 1.2 83 chr3R 29966065 intron TkR99D - chr3R 29966106 intron TkR99D - chr3R 29966148 intron TkR99D - chr3R_6_29965001 chr3R_29965001 RAL-45 1221 chr3R 30084856 30084882 chr3R 30086316 30086348 hobo 15 1465 3.5 5.5 4.5 2.7 1492 chr3R 30084856 intron sima + chr3R 30085602 intron sima + chr3R 30086348 intron sima + chr3R_15_30085001 chr3R_30085001 RAL-45 1222 chr3R 30264472 30264505 chr3R 30264658 30264690 7 183 1.0 0.0 0.5 4.7 218 chr3R 30264472 intergenic not near genes chr3R 30264581 intergenic not near genes chr3R 30264690 intergenic not near genes chr3R_7_30260001 chr3R_30260001 RAL-45 1223 chr3R 30298566 30298572 chr3R 30298643 30298663 4 88 0.0 3.0 1.5 1.6 97 chr3R 30298566 intron hdc + chr3R 30298614 intron hdc + chr3R 30298663 intron hdc + chr3R_4_30295001 chr3R_30295001 RAL-45 1224 chr3R 30317327 30317354 chr3R 30324919 30324946 roo 7 7592 0.5 1.0 0.8 3.9 7619 chr3R 30317327 intron hdc + chr3R 30321136 intron hdc + chr3R 30324946 intron hdc + chr3R_7_30320001 chr3R_30320001 RAL-45 1225 chr3R 30332029 30332057 chr3R 30332108 30332123 11 78 6.0 2.0 4.0 2.2 94 chr3R 30332029 intron hdc + chr3R 30332076 intron hdc + chr3R 30332123 intron hdc + chr3R_11_30330001 chr3R_30330001 RAL-45 1226 chr3R 30407009 30407039 chr3R 30407089 30407120 13 79 1.0 1.5 1.2 5.9 111 chr3R 30407009 intergenic not near genes chr3R 30407064 intergenic not near genes chr3R 30407120 intergenic not near genes chr3R_13_30405001 chr3R_30405001 RAL-45 1227 chr3R 30456395 30456425 chr3R 30456475 30456505 4 79 0.0 1.5 0.8 2.2 110 chr3R 30456395 intergenic CG2224 - chr3R 30456450 3` UTR CG2224 - chr3R 30456505 3` UTR CG2224 - chr3R_4_30455001 chr3R_30455001 RAL-45 1228 chr3R 30458010 30458047 chr3R 30458090 30458127 10 80 1.0 2.0 1.5 4.0 117 chr3R 30458010 intron CG2224 - chr3R 30458068 intron CG2224 - chr3R 30458127 intron CG2224 - chr3R_10_30455001 chr3R_30455001 RAL-45 1229 chr3R 30480477 30480512 chr3R 30482945 30482980 jockey 13 2468 1.5 3.5 2.5 3.7 2503 chr3R 30480477 intron PH4alphaEFB + chr3R 30481728 intron PH4alphaEFB + chr3R 30482980 intron PH4alphaEFB + chr3R_13_30480001 chr3R_30480001 RAL-45 1230 chr3R 30544727 30544758 chr3R 30544819 30544848 10 90 2.0 1.0 1.5 4.0 121 chr3R 30544727 intron tmod + chr3R 30544788 intron tmod + chr3R 30544848 intron tmod + chr3R_10_30540001 chr3R_30540001 RAL-45 1231 chr3R 30571703 30571716 chr3R 30571783 30571796 5 80 0.5 3.0 1.8 1.8 93 chr3R 30571703 intron tmod + chr3R 30571750 intron tmod + chr3R 30571796 intron tmod + chr3R_5_30570001 chr3R_30570001 RAL-45 1232 chr3R 30622348 30622368 chr3R 30622897 30622917 8 550 15.0 17.0 16.0 0.5 569 chr3R 30622348 intergenic CG44954 - chr3R 30622632 intergenic not near genes chr3R 30622917 intergenic not near genes chr3R_8_30620001 chr3R_30620001 RAL-45 1233 chr3R 30627604 30627638 chr3R 30627684 30627718 10 79 2.0 5.5 3.8 2.1 114 chr3R 30627604 3` UTR CG2267 - chr3R 30627661 exon CG2267 - chr3R 30627718 exon CG2267 - chr3R_10_30625001 chr3R_30625001 RAL-45 1234 chr3R 30649850 30649878 chr3R 30649930 30649958 7 80 1.5 3.0 2.2 2.2 108 chr3R 30649850 3` UTR CG34432 + chr3R 30649904 intergenic CG34432 +,CG34433 + chr3R 30649958 intergenic CG34433 +,CG34432 + chr3R_7_30645001 chr3R_30645001 RAL-45 1235 chr3R 30679517 30679552 chr3R 30686986 30687021 blood 8 7469 3.0 1.5 2.2 2.5 7504 chr3R 30679517 intergenic not near genes chr3R 30683269 intergenic not near genes chr3R 30687021 intergenic not near genes chr3R_8_30680001 chr3R_30680001 RAL-45 1236 chr3R 30818809 30818837 chr3R 30820374 30820402 1360 4 1565 1.5 1.0 1.2 1.8 1593 chr3R 30818809 intron cindr + chr3R 30819606 intron cindr + chr3R 30820402 intron cindr + chr3R_4_30815001 chr3R_30815001 RAL-45 1237 chr3R 31025346 31025357 chr3R 31025436 31025447 8 90 1.5 8.0 4.8 1.4 101 chr3R 31025346 intergenic not near genes chr3R 31025396 intergenic not near genes chr3R 31025447 intergenic not near genes chr3R_8_31025001 chr3R_31025001 RAL-45 1238 chr3R 31042112 31042144 chr3R 31042199 31042231 11 85 1.5 2.5 2.0 3.7 119 chr3R 31042112 intron CanA1 + chr3R 31042172 intron CanA1 + chr3R 31042231 intron CanA1 + chr3R_11_31040001 chr3R_31040001 RAL-45 1239 chr3R 31102054 31102076 chr3R 31102136 31102157 9 81 0.0 5.0 2.5 2.6 103 chr3R 31102054 intergenic not near genes chr3R 31102106 intergenic not near genes chr3R 31102157 intergenic not near genes chr3R_9_31100001 chr3R_31100001 RAL-45 1240 chr3R 31279377 31279408 chr3R 31285568 31285599 diver 9 6190 2.5 4.5 3.5 2.0 6222 chr3R 31279377 intergenic not near genes chr3R 31282488 intergenic not near genes chr3R 31285599 intergenic not near genes chr3R_9_31280001 chr3R_31280001 RAL-45 1241 chr3R 31413094 31413121 chr3R 31418294 31418321 copia 4 5200 6.0 3.0 4.5 0.7 5227 chr3R 31413094 intron Gprk2 + chr3R 31415708 intron Gprk2 + chr3R 31418321 intron Gprk2 + chr3R_4_31415001 chr3R_31415001 RAL-45 1242 chr3R 31426878 31426906 chr3R 31426970 31426998 7 90 2.0 2.5 2.2 2.2 120 chr3R 31426878 intron Gprk2 + chr3R 31426938 intron Gprk2 + chr3R 31426998 intron Gprk2 + chr3R_7_31425001 chr3R_31425001 RAL-45 1243 chr3R 31435367 31435388 chr3R 31435519 31435540 10 152 0.5 1.5 1.0 5.0 173 chr3R 31435367 intron Gprk2 + chr3R 31435454 intron Gprk2 + chr3R 31435540 intron Gprk2 + chr3R_10_31435001 chr3R_31435001 RAL-45 1244 chr3R 31442274 31442287 chr3R 31442359 31442372 6 85 2.0 3.0 2.5 1.7 98 chr3R 31442274 intron Gprk2 + chr3R 31442323 intron Gprk2 + chr3R 31442372 intron Gprk2 + chr3R_6_31440001 chr3R_31440001 RAL-45 1245 chr3R 31448607 31448631 chr3R 31448683 31448699 7 74 3.5 4.0 3.8 1.5 92 chr3R 31448607 intron Gprk2 + chr3R 31448653 intron Gprk2 + chr3R 31448699 intron Gprk2 + chr3R_7_31445001 chr3R_31445001 RAL-45 1246 chr3R 31539865 31539883 chr3R 31539950 31539968 4 85 3.5 4.5 4.0 0.8 103 chr3R 31539865 intergenic not near genes chr3R 31539916 intergenic not near genes chr3R 31539968 intergenic not near genes chr3R_4_31535001 chr3R_31535001 RAL-45 1247 chr3R 31627903 31627930 chr3R 31628051 31628078 10 148 3.5 2.0 2.8 2.6 175 chr3R 31627903 intron kek6 + chr3R 31627990 intron kek6 + chr3R 31628078 intron kek6 + chr3R_10_31625001 chr3R_31625001 RAL-45 1248 chr3R 31643221 31643242 chr3R 31643300 31643321 7 78 2.5 0.5 1.5 2.8 100 chr3R 31643221 intron kek6 + chr3R 31643271 intron kek6 + chr3R 31643321 intron kek6 + chr3R_7_31640001 chr3R_31640001 RAL-45 1249 chr3R 31691530 31691562 chr3R 31696296 31696315 Doc 19 4761 4.0 6.0 5.0 3.2 4785 chr3R 31691530 intergenic not near genes chr3R 31693922 intergenic not near genes chr3R 31696315 intergenic not near genes chr3R_19_31690001 chr3R_31690001 RAL-45 1250 chr3R 31699719 31699745 chr3R 31699800 31699827 15 80 4.5 3.0 3.8 3.1 108 chr3R 31699719 intergenic not near genes chr3R 31699773 intergenic not near genes chr3R 31699827 intergenic not near genes chr3R_15_31695001 chr3R_31695001 RAL-45 1251 chr3R 31831536 31831570 chr3R 31831615 31831649 17 77 2.5 5.0 3.8 3.5 113 chr3R 31831536 intron RhoGAP100F + chr3R 31831592 intron RhoGAP100F + chr3R 31831649 intron RhoGAP100F + chr3R_17_31830001 chr3R_31830001 RAL-45 1252 chr3R 31897847 31897878 chr3R 31897987 31898014 7 138 2.5 1.5 2.0 2.3 167 chr3R 31897847 intron heph - chr3R 31897930 intron heph - chr3R 31898014 intron heph - chr3R_7_31895001 chr3R_31895001 RAL-45 1253 chr3R 31930558 31930592 chr3R 31930640 31930673 12 79 5.5 2.0 3.8 2.5 115 chr3R 31930558 intron heph - chr3R 31930616 intron heph - chr3R 31930673 intron heph - chr3R_12_31930001 chr3R_31930001 RAL-45 1254 chr3R 31949543 31949550 chr3R 31949889 31949894 4 346 5.0 7.5 6.2 0.6 351 chr3R 31949543 intron heph - chr3R 31949718 intron heph - chr3R 31949894 intron heph - chr3R_4_31945001 chr3R_31945001 RAL-45 1255 chr3R 31958685 31958716 chr3R 31958790 31958820 7 104 3.0 5.0 4.0 1.4 135 chr3R 31958685 intron heph - chr3R 31958752 intron heph - chr3R 31958820 intron heph - chr3R_7_31955001 chr3R_31955001 RAL-45 1256 chr3R 31997990 31998025 chr3R 32005460 32005462 blood 8 7466 1.5 3.0 2.2 2.5 7472 chr3R 31997990 intron heph - chr3R 32001726 intron heph - chr3R 32005462 intron heph - chr3R_8_32000001 chr3R_32000001 RAL-45 1257 chr3R 32034259 32034293 chr3R 32034342 32034370 7 82 3.0 3.0 3.0 1.8 111 chr3R 32034259 intergenic not near genes chr3R 32034314 intergenic not near genes chr3R 32034370 intergenic not near genes chr3R_7_32030001 chr3R_32030001 RAL-45 1258 chr4 76492 76508 chr4 81935 81951 I-element 6 5443 3.5 1.0 2.2 1.9 5459 chr4 76492 intron pan + chr4 79222 intron pan + chr4 81951 intron pan + chr4_6_75001 chr4_75001 RAL-45 1259 chrX 428429 428450 chrX 434608 434635 3S18 4 6184 2.5 0.0 1.2 1.8 6206 chrX 428429 intron CG32816 - chrX 431532 intron CG32816 - chrX 434635 intron CG32816 - chrX_4_430001 chrX_430001 RAL-45 1260 chrX 440998 441024 chrX 441075 441102 12 78 1.0 3.5 2.2 3.8 104 chrX 440998 intron CG32816 - chrX 441050 intron CG32816 - chrX 441102 intron CG32816 - chrX_12_440001 chrX_440001 RAL-45 1261 chrX 494608 494632 chrX 494688 494724 8 88 3.0 2.5 2.8 2.1 116 chrX 494608 intergenic CG17778 + chrX 494666 5` UTR CG17778 + chrX 494724 intron CG17778 + chrX_8_490001 chrX_490001 RAL-45 1262 chrX 547634 547656 chrX 547875 547900 4 243 2.5 1.5 2.0 1.3 266 chrX 547634 intron Appl + chrX 547767 intron Appl + chrX 547900 intron Appl + chrX_4_545001 chrX_545001 RAL-45 1263 chrX 551423 551453 chrX 558985 559013 412 12 7561 2.0 2.0 2.0 4.0 7590 chrX 551423 intron Appl + chrX 555218 intron Appl + chrX 559013 intron Appl + chrX_12_555001 chrX_555001 RAL-45 1264 chrX 611140 611166 chrX 611227 611256 10 89 0.5 2.0 1.2 4.5 116 chrX 611140 intron CG13366 - chrX 611198 intron CG13366 - chrX 611256 intron CG13366 - chrX_10_610001 chrX_610001 RAL-45 1265 chrX 667658 667681 chrX 667742 667765 4 84 1.0 1.0 1.0 2.0 107 chrX 667658 intergenic not near genes chrX 667712 intergenic not near genes chrX 667765 intergenic not near genes chrX_4_665001 chrX_665001 RAL-45 1266 chrX 670264 670296 chrX 670344 670373 4 78 0.0 2.5 1.2 1.8 109 chrX 670264 intergenic not near genes chrX 670318 intergenic not near genes chrX 670373 intergenic not near genes chrX_4_670001 chrX_670001 RAL-45 1267 chrX 680846 680868 chrX 680925 680951 9 82 3.0 1.5 2.2 2.8 105 chrX 680846 intergenic not near genes chrX 680898 intergenic not near genes chrX 680951 intergenic not near genes chrX_9_680001 chrX_680001 RAL-45 1268 chrX 695309 695322 chrX 695371 695399 4 73 1.5 1.5 1.5 1.6 90 chrX 695309 intron sdk + chrX 695354 intron sdk + chrX 695399 intron sdk + chrX_4_695001 chrX_695001 RAL-45 1269 chrX 706803 706823 chrX 707167 707187 4 364 0.0 2.0 1.0 2.0 384 chrX 706803 intron sdk + chrX 706995 intron sdk + chrX 707187 intron sdk + chrX_4_705001 chrX_705001 RAL-45 1270 chrX 715284 715316 chrX 715360 715368 4 70 2.0 3.0 2.5 1.1 84 chrX 715284 intron sdk + chrX 715326 intron sdk + chrX 715368 intron sdk + chrX_4_715001 chrX_715001 RAL-45 1271 chrX 778128 778144 chrX 778218 778234 5 90 5.5 1.0 3.2 1.2 106 chrX 778128 intron fz3 + chrX 778181 intron fz3 + chrX 778234 intron fz3 + chrX_5_775001 chrX_775001 RAL-45 1272 chrX 778146 778155 chrX 778216 778245 8 87 4.5 1.0 2.8 2.1 99 chrX 778146 intron fz3 + chrX 778196 intron fz3 + chrX 778245 intron fz3 + chrX_8_775001 chrX_775001 RAL-45 1273 chrX 806789 806818 chrX 806885 806914 16 95 4.5 3.5 4.0 3.2 125 chrX 806789 intron Sec22 + chrX 806852 intron Sec22 + chrX 806914 intron Sec22 + chrX_16_805001 chrX_805001 RAL-45 1274 chrX 906703 906720 chrX 908492 908509 S-element 4 1789 1.0 6.0 3.5 0.9 1806 chrX 906703 intron CG43867 - chrX 907606 intron CG43867 - chrX 908509 intron CG43867 - chrX_4_905001 chrX_905001 RAL-45 1275 chrX 912027 912051 chrX 912112 912139 7 86 3.5 3.0 3.2 1.7 112 chrX 912027 intron CG43867 - chrX 912083 intron CG43867 - chrX 912139 intron CG43867 - chrX_7_910001 chrX_910001 RAL-45 1276 chrX 1253731 1253758 chrX 1253811 1253840 15 81 2.0 1.5 1.8 5.4 109 chrX 1253731 intron Atf3 - chrX 1253786 intron Atf3 - chrX 1253840 intron Atf3 - chrX_15_1250001 chrX_1250001 RAL-45 1277 chrX 1416396 1416425 chrX 1416475 1416504 6 76 1.5 2.0 1.8 2.1 108 chrX 1416396 intron futsch + chrX 1416450 intron futsch + chrX 1416504 intron futsch + chrX_6_1415001 chrX_1415001 RAL-45 1278 chrX 1518040 1518069 chrX 1523442 1523453 jockey 8 5399 2.5 4.5 3.5 1.8 5413 chrX 1518040 intergenic inc + chrX 1520746 intergenic not near genes chrX 1523453 intergenic not near genes chrX_8_1520001 chrX_1520001 RAL-45 1279 chrX 1627974 1628002 chrX 1635442 1635470 gtwin 5 7467 2.0 5.0 3.5 1.1 7496 chrX 1627974 intron,intron Mur2B -,br + chrX 1631722 intron,intron Mur2B -,br + chrX 1635470 intron,intron Mur2B -,br + chrX_5_1630001 chrX_1630001 RAL-45 1280 chrX 1674863 1674872 chrX 1674938 1674942 5 74 1.0 1.0 1.0 2.5 79 chrX 1674863 3` UTR CG32809 - chrX 1674902 3` UTR CG32809 - chrX 1674942 3` UTR CG32809 - chrX_5_1670001 chrX_1670001 RAL-45 1281 chrX 1954886 1954913 chrX 1962826 1962853 Stalker2 5 7938 1.5 2.0 1.8 1.8 7967 chrX 1954886 intron Hr4 + chrX 1958870 intron Hr4 + chrX 1962853 intron Hr4 + chrX_5_1955001 chrX_1955001 RAL-45 1282 chrX 2399836 2399869 chrX 2408189 2408208 roo 9 8348 4.0 3.0 3.5 2.0 8372 chrX 2399836 intergenic not near genes chrX 2404022 intergenic not near genes chrX 2408208 intergenic not near genes chrX_9_2400001 chrX_2400001 RAL-45 1283 chrX 2559359 2559388 chrX 2559447 2559475 7 88 3.0 1.5 2.2 2.2 116 chrX 2559359 intron Pdfr + chrX 2559417 intron Pdfr + chrX 2559475 intron Pdfr + chrX_7_2555001 chrX_2555001 RAL-45 1284 chrX 2578811 2578838 chrX 2578903 2578930 6 92 0.5 0.5 0.5 4.0 119 chrX 2578811 intergenic Pdfr +,Vha36-3 - chrX 2578870 intergenic Vha36-3 -,Pdfr + chrX 2578930 intergenic Vha36-3 -,Pdfr + chrX_6_2575001 chrX_2575001 RAL-45 1285 chrX 2803494 2803519 chrX 2803637 2803662 5 143 0.5 2.5 1.5 2.0 168 chrX 2803494 intron kirre + chrX 2803578 intron kirre + chrX 2803662 intron kirre + chrX_5_2800001 chrX_2800001 RAL-45 1286 chrX 2886659 2886673 chrX 2886749 2886763 5 90 1.0 2.0 1.5 2.0 104 chrX 2886659 intron kirre + chrX 2886711 intron kirre + chrX 2886763 intron kirre + chrX_5_2885001 chrX_2885001 RAL-45 1287 chrX 3058028 3058039 chrX 3058269 3058280 pogo 5 241 1.0 1.0 1.0 2.5 252 chrX 3058028 intron kirre + chrX 3058154 intron kirre + chrX 3058280 intron kirre + chrX_5_3055001 chrX_3055001 RAL-45 1288 chrX 3075633 3075666 chrX 3080939 3080970 Transpac 4 5306 1.5 1.5 1.5 1.6 5337 chrX 3075633 intron kirre + chrX 3078302 intron kirre + chrX 3080970 intron kirre + chrX_4_3075001 chrX_3075001 RAL-45 1289 chrX 3203469 3203493 chrX 3203668 3203692 4 199 2.5 2.5 2.5 1.1 223 chrX 3203469 intron dnc + chrX 3203580 intron dnc + chrX 3203692 intron dnc + chrX_4_3200001 chrX_3200001 RAL-45 1290 chrX 3408997 3409014 chrX 3409074 3409091 6 77 0.5 3.5 2.0 2.0 94 chrX 3408997 intron,intron CR44999 +,CG12535 - chrX 3409044 intron,intron CR44999 +,CG12535 - chrX 3409091 intron,intron CR44999 +,CG12535 - chrX_6_3405001 chrX_3405001 RAL-45 1291 chrX 3597564 3597579 chrX 3619732 3619747 roo 7 22166 1.0 6.5 3.8 1.5 22183 chrX 3597564 intron AstA-R1 + chrX 3608656 intron AstA-R1 + chrX 3619747 intron AstA-R1 + chrX_7_3605001 chrX_3605001 RAL-45 1292 chrX 3726781 3726791 chrX 3730178 3730188 NOF 4 3397 2.0 5.0 3.5 0.9 3407 chrX 3726781 intron tlk + chrX 3728484 intron tlk + chrX 3730188 intron tlk + chrX_4_3725001 chrX_3725001 RAL-45 1293 chrX 3866104 3866134 chrX 3866182 3866212 4 78 0.0 0.5 0.2 3.3 108 chrX 3866104 intron yin - chrX 3866158 intron yin - chrX 3866212 intron yin - chrX_4_3865001 chrX_3865001 RAL-45 1294 chrX 3881277 3881300 chrX 3881416 3881439 6 139 2.5 3.5 3.0 1.5 162 chrX 3881277 intron VhaAC39-1 + chrX 3881358 intron VhaAC39-1 + chrX 3881439 intron VhaAC39-1 + chrX_6_3880001 chrX_3880001 RAL-45 1295 chrX 3986864 3986878 chrX 3994497 3994511 412 4 7633 2.5 3.0 2.8 1.1 7647 chrX 3986864 intergenic not near genes chrX 3990688 intergenic not near genes chrX 3994511 intergenic not near genes chrX_4_3990001 chrX_3990001 RAL-45 1296 chrX 4021174 4021191 chrX 4021266 4021289 6 97 2.5 1.5 2.0 2.0 115 chrX 4021174 intergenic not near genes chrX 4021232 intergenic not near genes chrX 4021289 intergenic not near genes chrX_6_4020001 chrX_4020001 RAL-45 1297 chrX 4157896 4157918 chrX 4164949 4164971 297 5 7053 3.0 1.0 2.0 1.7 7075 chrX 4157896 intron Fas2 - chrX 4161434 intron Fas2 - chrX 4164971 intron Fas2 - chrX_5_4160001 chrX_4160001 RAL-45 1298 chrX 4262754 4262784 chrX 4262852 4262883 8 99 0.5 2.0 1.2 3.6 129 chrX 4262754 intergenic not near genes chrX 4262818 intergenic not near genes chrX 4262883 intergenic not near genes chrX_8_4260001 chrX_4260001 RAL-45 1299 chrX 4396978 4397003 chrX 4397063 4397087 5 85 2.5 2.5 2.5 1.4 109 chrX 4396978 intron CR32773 - chrX 4397032 intron CR32773 - chrX 4397087 intron CR32773 - chrX_5_4395001 chrX_4395001 RAL-45 1300 chrX 4436458 4436466 chrX 4436534 4436542 4 76 3.5 0.5 2.0 1.3 84 chrX 4436458 intron,intron CR32773 -,bi + chrX 4436500 intron,intron CR32773 -,bi + chrX 4436542 intron,intron CR32773 -,bi + chrX_4_4435001 chrX_4435001 RAL-45 1301 chrX 4717354 4717385 chrX 4717875 4717906 8 520 0.0 1.0 0.5 5.3 552 chrX 4717354 intron Proc-R + chrX 4717630 intron Proc-R + chrX 4717906 intron Proc-R + chrX_8_4715001 chrX_4715001 RAL-45 1302 chrX 4731816 4731826 chrX 4736909 4736919 jockey 4 5093 3.5 2.0 2.8 1.1 5103 chrX 4731816 intergenic not near genes chrX 4734368 intergenic not near genes chrX 4736919 intergenic not near genes chrX_4_4730001 chrX_4730001 RAL-45 1303 chrX 4763254 4763282 chrX 4763740 4763770 Stalker4 9 487 4.0 0.5 2.2 2.8 516 chrX 4763254 intergenic not near genes chrX 4763512 intergenic not near genes chrX 4763770 intergenic not near genes chrX_9_4760001 chrX_4760001 RAL-45 1304 chrX 4792385 4792403 chrX 4792818 4792836 jockey 5 433 3.0 6.5 4.8 0.9 451 chrX 4792385 intergenic not near genes chrX 4792610 intergenic not near genes chrX 4792836 intergenic not near genes chrX_5_4790001 chrX_4790001 RAL-45 1305 chrX 4827990 4827998 chrX 4835338 4835369 Stalker4 10 7362 3.5 2.0 2.8 2.6 7379 chrX 4827990 intergenic not near genes chrX 4831680 intergenic not near genes chrX 4835369 intergenic not near genes chrX_10_4830001 chrX_4830001 RAL-45 1306 chrX 4885786 4885808 chrX 4885868 4885901 9 86 2.0 3.5 2.8 2.4 115 chrX 4885786 intron CG42594 + chrX 4885844 intron CG42594 + chrX 4885901 intron CG42594 + chrX_9_4885001 chrX_4885001 RAL-45 1307 chrX 4946579 4946607 chrX 4946658 4946686 12 79 2.0 2.0 2.0 4.0 107 chrX 4946579 intron Ptp4E + chrX 4946632 intron Ptp4E + chrX 4946686 intron Ptp4E + chrX_12_4945001 chrX_4945001 RAL-45 1308 chrX 4965561 4965578 chrX 4965639 4965655 4 79 3.0 2.5 2.8 1.1 94 chrX 4965561 intron CR44833 - chrX 4965608 intron CR44833 - chrX 4965655 intron CR44833 - chrX_4_4965001 chrX_4965001 RAL-45 1309 chrX 5096275 5096306 chrX 5103840 5103871 springer 4 7565 1.0 2.5 1.8 1.4 7596 chrX 5096275 intron,intron CG15465 +,rg + chrX 5100073 intron,intron CG15465 +,rg + chrX 5103871 intron,intron CG15465 +,rg + chrX_4_5100001 chrX_5100001 RAL-45 1310 chrX 5147861 5147887 chrX 5147967 5147983 5 104 0.5 0.5 0.5 3.3 122 chrX 5147861 intron,intron CG15465 +,rg + chrX 5147922 intron,intron CG15465 +,rg + chrX 5147983 intron,intron CG15465 +,rg + chrX_5_5145001 chrX_5145001 RAL-45 1311 chrX 5220400 5220416 chrX 5220641 5220653 5 240 0.5 5.5 3.0 1.2 253 chrX 5220400 intron,intron CG15465 +,rg + chrX 5220526 intron,intron CG15465 +,rg + chrX 5220653 intron,intron CG15465 +,rg + chrX_5_5220001 chrX_5220001 RAL-45 1312 chrX 5514453 5514477 chrX 5514601 5514622 7 148 0.5 3.5 2.0 2.3 169 chrX 5514453 intergenic not near genes chrX 5514538 intergenic not near genes chrX 5514622 intergenic not near genes chrX_7_5510001 chrX_5510001 RAL-45 1313 chrX 5792557 5792738 chrX 5792703 5792821 5 119 3.0 0.5 1.8 1.8 264 chrX 5792557 exon CG12239 + chrX 5792689 exon CG12239 + chrX 5792821 exon CG12239 + chrX_5_5790001 chrX_5790001 RAL-45 1314 chrX 5798872 5798886 chrX 5799033 5799048 6 162 0.5 5.0 2.8 1.6 176 chrX 5798872 intergenic not near genes chrX 5798960 intergenic not near genes chrX 5799048 intergenic not near genes chrX_6_5795001 chrX_5795001 RAL-45 1315 chrX 5938420 5938456 chrX 5938507 5938543 6 87 0.5 1.0 0.8 3.3 123 chrX 5938420 intron CG3726 + chrX 5938482 intron CG3726 + chrX 5938543 intron CG3726 + chrX_6_5935001 chrX_5935001 RAL-45 1316 chrX 6171581 6171610 chrX 6179014 6179043 Quasimodo 6 7433 2.5 0.5 1.5 2.4 7462 chrX 6171581 intron Ca-alpha1T - chrX 6175312 intron Ca-alpha1T - chrX 6179043 intron Ca-alpha1T - chrX_6_6175001 chrX_6175001 RAL-45 1317 chrX 6215351 6215364 chrX 6215433 6215447 5 83 1.0 3.0 2.0 1.7 96 chrX 6215351 intergenic not near genes chrX 6215399 intergenic not near genes chrX 6215447 intergenic not near genes chrX_5_6215001 chrX_6215001 RAL-45 1318 chrX 6392868 6392902 chrX 6397633 6397667 Doc 7 4764 0.5 3.5 2.0 2.3 4799 chrX 6392868 intergenic not near genes chrX 6395268 intergenic not near genes chrX 6397667 intergenic not near genes chrX_7_6395001 chrX_6395001 RAL-45 1319 chrX 6459903 6459937 chrX 6459990 6460006 5 81 1.0 1.0 1.0 2.5 103 chrX 6459903 intron CG42340 - chrX 6459954 intron CG42340 - chrX 6460006 intron CG42340 - chrX_5_6455001 chrX_6455001 RAL-45 1320 chrX 6562817 6562851 chrX 6571299 6571333 Tirant 15 8480 4.0 4.0 4.0 3.0 8516 chrX 6562817 intron CG34417 + chrX 6567075 intron CG34417 + chrX 6571333 intron CG34417 + chrX_15_6565001 chrX_6565001 RAL-45 1321 chrX 6605479 6605493 chrX 6608501 6608515 Burdock 4 3022 2.5 2.5 2.5 1.1 3036 chrX 6605479 intron pigs + chrX 6606997 intron pigs + chrX 6608515 intron pigs + chrX_4_6605001 chrX_6605001 RAL-45 1322 chrX 6795008 6795026 chrX 6795093 6795108 6 85 2.0 3.5 2.8 1.6 100 chrX 6795008 intron C3G - chrX 6795058 intron C3G - chrX 6795108 intron C3G - chrX_6_6795001 chrX_6795001 RAL-45 1323 chrX 6883152 6883182 chrX 6883234 6883264 6 82 2.5 1.0 1.8 2.1 112 chrX 6883152 intergenic not near genes chrX 6883208 intergenic not near genes chrX 6883264 intergenic not near genes chrX_6_6880001 chrX_6880001 RAL-45 1324 chrX 6897695 6897710 chrX 6897805 6897820 7 110 0.0 2.0 1.0 3.5 125 chrX 6897695 intergenic not near genes chrX 6897758 intergenic not near genes chrX 6897820 intergenic not near genes chrX_7_6895001 chrX_6895001 RAL-45 1325 chrX 6979532 6979557 chrX 6979974 6979996 8 439 1.0 2.5 1.8 2.9 464 chrX 6979532 intron ogre - chrX 6979764 intron ogre - chrX 6979996 intron ogre - chrX_8_6975001 chrX_6975001 RAL-45 1326 chrX 7023603 7023627 chrX 7030992 7031016 Tabor 9 7389 4.5 1.5 3.0 2.2 7413 chrX 7023603 intron CG12541 - chrX 7027310 intron CG12541 - chrX 7031016 intron CG12541 - chrX_9_7025001 chrX_7025001 RAL-45 1327 chrX 7113730 7113752 chrX 7113809 7113831 4 79 2.0 2.5 2.2 1.2 101 chrX 7113730 intergenic not near genes chrX 7113780 intergenic not near genes chrX 7113831 intergenic not near genes chrX_4_7110001 chrX_7110001 RAL-45 1328 chrX 7125250 7125278 chrX 7134405 7134437 roo 6 9158 0.0 1.5 0.8 3.3 9187 chrX 7125250 intergenic not near genes chrX 7129844 intergenic not near genes chrX 7134437 intergenic not near genes chrX_6_7125001 chrX_7125001 RAL-45 1329 chrX 7203153 7203183 chrX 7203235 7203265 5 82 1.5 3.5 2.5 1.4 112 chrX 7203153 intron,intron CG9650 +,CR44357 - chrX 7203209 intron,intron CG9650 +,CR44357 - chrX 7203265 intron,intron CG9650 +,CR44357 - chrX_5_7200001 chrX_7200001 RAL-45 1330 chrX 7294515 7294529 chrX 7294613 7294616 4 95 4.0 3.5 3.8 0.8 101 chrX 7294515 intron,intron CR44357 -,CG1677 - chrX 7294566 intron,intron CR44357 -,CG1677 - chrX 7294616 intron,intron CR44357 -,CG1677 - chrX_4_7290001 chrX_7290001 RAL-45 1331 chrX 7488024 7488041 chrX 7488151 7488168 9 127 2.0 8.0 5.0 1.5 144 chrX 7488024 5` UTR CR45534 + chrX 7488096 5` UTR CR45534 + chrX 7488168 5` UTR CR45534 + chrX_9_7485001 chrX_7485001 RAL-45 1332 chrX 7702909 7702921 chrX 7703348 7703360 jockey 6 439 2.5 1.0 1.8 2.1 451 chrX 7702909 intron CHES-1-like - chrX 7703134 intron CHES-1-like - chrX 7703360 intron CHES-1-like - chrX_6_7700001 chrX_7700001 RAL-45 1333 chrX 7702924 7702932 chrX 7703343 7703371 jockey 5 435 1.5 1.0 1.2 2.3 447 chrX 7702924 intron CHES-1-like - chrX 7703148 intron CHES-1-like - chrX 7703371 intron CHES-1-like - chrX_5_7700001 chrX_7700001 RAL-45 1334 chrX 7999461 7999468 chrX 7999538 7999544 4 76 4.5 5.5 5.0 0.7 83 chrX 7999461 exon Tbh + chrX 7999502 exon Tbh + chrX 7999544 exon Tbh + chrX_4_7995001 chrX_7995001 RAL-45 1335 chrX 8085575 8085602 chrX 8085661 8085688 9 84 3.5 0.5 2.0 3.0 113 chrX 8085575 intron,5` UTR CG2256 -,CR45535 + chrX 8085632 intron,5` UTR CG2256 -,CR45535 + chrX 8085688 intron,5` UTR CG2256 -,CR45535 + chrX_9_8085001 chrX_8085001 RAL-45 1336 chrX 8305194 8305220 chrX 8305275 8305300 7 81 4.5 2.5 3.5 1.6 106 chrX 8305194 intron nAChRalpha3 - chrX 8305247 intron nAChRalpha3 - chrX 8305300 intron nAChRalpha3 - chrX_7_8305001 chrX_8305001 RAL-45 1337 chrX 8421474 8421491 chrX 8421563 8421583 4 91 2.5 4.0 3.2 1.0 109 chrX 8421474 intron Trf2 + chrX 8421528 intron Trf2 + chrX 8421583 intron Trf2 + chrX_4_8420001 chrX_8420001 RAL-45 1338 chrX 8772247 8772251 chrX 8772326 8772330 4 79 4.0 5.0 4.5 0.7 83 chrX 8772247 intron Lim1 - chrX 8772288 intron Lim1 - chrX 8772330 intron Lim1 - chrX_4_8770001 chrX_8770001 RAL-45 1339 chrX 8787489 8787503 chrX 8787586 8787597 4 96 1.5 2.5 2.0 1.3 108 chrX 8787489 intron Lim1 - chrX 8787543 intron Lim1 - chrX 8787597 intron Lim1 - chrX_4_8785001 chrX_8785001 RAL-45 1340 chrX 8894102 8894126 chrX 8894203 8894227 6 101 1.0 1.5 1.2 2.7 125 chrX 8894102 intron Moe - chrX 8894164 intron Moe - chrX 8894227 intron Moe - chrX_6_8890001 chrX_8890001 RAL-45 1341 chrX 8922328 8922363 chrX 8922760 8922796 jockey 6 433 1.5 1.5 1.5 2.4 468 chrX 8922328 intron rdgA + chrX 8922562 intron rdgA + chrX 8922796 intron rdgA + chrX_6_8920001 chrX_8920001 RAL-45 1342 chrX 9473848 9473887 chrX 9474083 9474122 10 233 1.0 2.0 1.5 4.0 274 chrX 9473848 intron mgl - chrX 9473985 intron mgl - chrX 9474122 intron mgl - chrX_10_9470001 chrX_9470001 RAL-45 1343 chrX 9508132 9508164 chrX 9509650 9509682 jockey 7 1518 1.5 3.5 2.5 2.0 1550 chrX 9508132 intron CG32700 - chrX 9508907 intron CG32700 - chrX 9509682 intron CG32700 - chrX_7_9505001 chrX_9505001 RAL-45 1344 chrX 9575791 9575823 chrX 9576115 9576147 mdg3 10 324 3.0 2.5 2.8 2.6 356 chrX 9575791 intron,exon CG32699 -,CG42395 - chrX 9575969 intron,intron CG32699 -,CG42395 - chrX 9576147 intron,5` UTR CG32699 -,CG42395 - chrX_10_9575001 chrX_9575001 RAL-45 1345 chrX 9599174 9599187 chrX 9599251 9599263 5 77 4.5 2.5 3.5 1.1 89 chrX 9599174 intergenic not near genes chrX 9599218 intergenic not near genes chrX 9599263 intergenic not near genes chrX_5_9595001 chrX_9595001 RAL-45 1346 chrX 9791872 9791896 chrX 9791969 9791993 4 97 0.5 5.0 2.8 1.1 121 chrX 9791872 intron CG32698 + chrX 9791932 intron CG32698 + chrX 9791993 intron CG32698 + chrX_4_9790001 chrX_9790001 RAL-45 1347 chrX 9923394 9923423 chrX 9923485 9923514 9 91 2.0 1.0 1.5 3.6 120 chrX 9923394 intergenic not near genes chrX 9923454 intergenic not near genes chrX 9923514 intergenic not near genes chrX_9_9920001 chrX_9920001 RAL-45 1348 chrX 10027176 10027200 chrX 10027256 10027280 4 79 1.5 4.0 2.8 1.1 104 chrX 10027176 intron Cht6 + chrX 10027228 intron Cht6 + chrX 10027280 intron Cht6 + chrX_4_10025001 chrX_10025001 RAL-45 1349 chrX 10154288 10154309 chrX 10154364 10154385 5 75 2.5 2.5 2.5 1.4 97 chrX 10154288 intron,intron CR44894 -,CG12645 + chrX 10154336 intron,intron CR44894 -,CG12645 + chrX 10154385 intron,exon CR44894 -,CG12645 + chrX_5_10150001 chrX_10150001 RAL-45 1350 chrX 10550340 10550366 chrX 10550418 10550444 6 78 1.5 1.0 1.2 2.7 104 chrX 10550340 intron spri - chrX 10550392 intron spri - chrX 10550444 intron spri - chrX_6_10550001 chrX_10550001 RAL-45 1351 chrX 10550853 10550889 chrX 10552320 10552356 hobo 8 1467 3.0 4.0 3.5 1.8 1503 chrX 10550853 intron spri - chrX 10551604 intron spri - chrX 10552356 intron spri - chrX_8_10550001 chrX_10550001 RAL-45 1352 chrX 10685130 10685156 chrX 10685228 10685254 5 98 1.0 1.0 1.0 2.5 124 chrX 10685130 intron X11Lbeta + chrX 10685192 intron X11Lbeta + chrX 10685254 intron X11Lbeta + chrX_5_10685001 chrX_10685001 RAL-45 1353 chrX 10717540 10717571 chrX 10717629 10717660 5 87 1.0 3.5 2.2 1.6 120 chrX 10717540 intron CG32676 - chrX 10717600 intron CG32676 - chrX 10717660 intron CG32676 - chrX_5_10715001 chrX_10715001 RAL-45 1354 chrX 10811866 10811899 chrX 10811958 10811990 15 91 1.0 0.5 0.8 8.3 124 chrX 10811866 intron Imp - chrX 10811928 intron Imp - chrX 10811990 intron Imp - chrX_15_10810001 chrX_10810001 RAL-45 1355 chrX 10933919 10933944 chrX 10934007 10934032 5 88 1.0 1.5 1.2 2.3 113 chrX 10933919 intron Myo10A + chrX 10933976 intron Myo10A + chrX 10934032 intron Myo10A + chrX_5_10930001 chrX_10930001 RAL-45 1356 chrX 11166765 11166787 chrX 11166846 11166868 4 81 1.0 0.0 0.5 2.7 103 chrX 11166765 intergenic not near genes chrX 11166816 intergenic not near genes chrX 11166868 intergenic not near genes chrX_4_11165001 chrX_11165001 RAL-45 1357 chrX 11184259 11184273 chrX 11189335 11189348 flea 5 5076 1.5 1.5 1.5 2.0 5089 chrX 11184259 intergenic not near genes chrX 11186804 intergenic not near genes chrX 11189348 intergenic not near genes chrX_5_11185001 chrX_11185001 RAL-45 1358 chrX 11194449 11194457 chrX 11201870 11201878 gypsy5 6 7420 5.0 6.5 5.8 0.9 7429 chrX 11194449 intergenic not near genes chrX 11198164 intergenic not near genes chrX 11201878 intergenic CG11106 + chrX_6_11195001 chrX_11195001 RAL-45 1359 chrX 11254173 11254197 chrX 11254284 11254308 9 111 4.0 5.5 4.8 1.6 135 chrX 11254173 intron CG44422 - chrX 11254240 intron CG44422 - chrX 11254308 intron CG44422 - chrX_9_11250001 chrX_11250001 RAL-45 1360 chrX 11312073 11312091 chrX 11319415 11319428 Stalker2 4 7344 0.5 3.5 2.0 1.3 7355 chrX 11312073 intergenic not near genes chrX 11315750 intergenic not near genes chrX 11319428 intergenic not near genes chrX_4_11315001 chrX_11315001 RAL-45 1361 chrX 11633417 11633428 chrX 11640471 11640482 297 4 7054 2.0 2.0 2.0 1.3 7065 chrX 11633417 intron Ptp10D + chrX 11636950 intron Ptp10D + chrX 11640482 intron Ptp10D + chrX_4_11635001 chrX_11635001 RAL-45 1362 chrX 11880936 11880956 chrX 11881018 11881038 5 82 1.5 2.5 2.0 1.7 102 chrX 11880936 intron CG10353 - chrX 11880987 intron CG10353 - chrX 11881038 intron CG10353 - chrX_5_11880001 chrX_11880001 RAL-45 1363 chrX 12301954 12301987 chrX 12303260 12303284 X-element 9 1303 0.5 1.5 1.0 4.5 1330 chrX 12301954 intron Ten-a + chrX 12302619 intron Ten-a + chrX 12303284 intron Ten-a + chrX_9_12300001 chrX_12300001 RAL-45 1364 chrX 12985979 12986004 chrX 12986075 12986100 6 96 1.5 2.5 2.0 2.0 121 chrX 12985979 intergenic not near genes chrX 12986040 intergenic not near genes chrX 12986100 intergenic not near genes chrX_6_12985001 chrX_12985001 RAL-45 1365 chrX 13061352 13061375 chrX 13061462 13061486 6 111 1.5 1.0 1.2 2.7 134 chrX 13061352 intron rad + chrX 13061419 intron rad + chrX 13061486 intron rad + chrX_6_13060001 chrX_13060001 RAL-45 1366 chrX 13172351 13172371 chrX 13172427 13172447 7 76 3.5 2.0 2.8 1.8 96 chrX 13172351 exon CG34411 - chrX 13172399 intron CG34411 - chrX 13172447 intron CG34411 - chrX_7_13170001 chrX_13170001 RAL-45 1367 chrX 13429464 13429495 chrX 13430613 13430644 jockey 4 1149 0.0 1.0 0.5 2.7 1180 chrX 13429464 intergenic not near genes chrX 13430054 intergenic not near genes chrX 13430644 intergenic not near genes chrX_4_13430001 chrX_13430001 RAL-45 1368 chrX 13560564 13560585 chrX 13560645 13560657 10 80 3.0 2.5 2.8 2.6 93 chrX 13560564 intergenic not near genes chrX 13560610 intergenic not near genes chrX 13560657 intergenic not near genes chrX_10_13560001 chrX_13560001 RAL-45 1369 chrX 13937989 13938008 chrX 13941260 13941279 I-element 4 3268 0.5 1.5 1.0 2.0 3290 chrX 13937989 intron mamo - chrX 13939634 intron mamo - chrX 13941279 intron mamo - chrX_4_13935001 chrX_13935001 RAL-45 1370 chrX 14105020 14105050 chrX 14114171 14114200 roo 7 9150 0.0 4.0 2.0 2.3 9180 chrX 14105020 intergenic not near genes chrX 14109610 intergenic not near genes chrX 14114200 5` UTR CR44657 + chrX_7_14105001 chrX_14105001 RAL-45 1371 chrX 14187613 14187647 chrX 14187744 14187778 14 129 3.0 2.0 2.5 4.0 165 chrX 14187613 exon CG12481 + chrX 14187696 3` UTR CG12481 + chrX 14187778 3` UTR CG12481 + chrX_14_14185001 chrX_14185001 RAL-45 1372 chrX 14333828 14333845 chrX 14333924 14333943 4 98 2.5 0.5 1.5 1.6 115 chrX 14333828 intron dpr8 + chrX 14333886 intron dpr8 + chrX 14333943 intron dpr8 + chrX_4_14330001 chrX_14330001 RAL-45 1373 chrX 14448717 14448733 chrX 14448943 14448966 4 230 2.0 0.5 1.2 1.8 249 chrX 14448717 intron dpr8 + chrX 14448842 intron dpr8 + chrX 14448966 intron dpr8 + chrX_4_14445001 chrX_14445001 RAL-45 1374 chrX 14484974 14484986 chrX 14485063 14485075 6 89 0.0 4.0 2.0 2.0 101 chrX 14484974 intergenic not near genes chrX 14485024 intergenic not near genes chrX 14485075 intergenic not near genes chrX_6_14485001 chrX_14485001 RAL-45 1375 chrX 14501977 14501986 chrX 14502060 14502069 4 83 3.5 3.0 3.2 1.0 92 chrX 14501977 intergenic not near genes chrX 14502023 intergenic not near genes chrX 14502069 intergenic not near genes chrX_4_14500001 chrX_14500001 RAL-45 1376 chrX 14512137 14512161 chrX 14512214 14512234 4 77 3.0 4.0 3.5 0.9 97 chrX 14512137 intergenic not near genes chrX 14512186 intergenic not near genes chrX 14512234 intergenic not near genes chrX_4_14510001 chrX_14510001 RAL-45 1377 chrX 14636460 14636489 chrX 14641901 14641929 I-element 9 5441 0.5 1.5 1.0 4.5 5469 chrX 14636460 intron NetA - chrX 14639194 intron NetA - chrX 14641929 intron NetA - chrX_9_14635001 chrX_14635001 RAL-45 1378 chrX 14714044 14714058 chrX 14714126 14714140 4 82 0.5 0.5 0.5 2.7 96 chrX 14714044 intron NetB - chrX 14714092 intron NetB - chrX 14714140 intron NetB - chrX_4_14710001 chrX_14710001 RAL-45 1379 chrX 14813749 14813768 chrX 14813827 14813846 5 78 1.5 4.0 2.8 1.3 97 chrX 14813749 intron rut - chrX 14813798 intron rut - chrX 14813846 intron rut - chrX_5_14810001 chrX_14810001 RAL-45 1380 chrX 14818770 14818796 chrX 14823974 14824000 copia 4 5203 3.0 1.5 2.2 1.2 5230 chrX 14818770 intron rut - chrX 14821385 intron rut - chrX 14824000 intron rut - chrX_4_14820001 chrX_14820001 RAL-45 1381 chrX 14906470 14906500 chrX 14910721 14910753 6 4254 15.0 24.5 19.8 0.3 4283 chrX 14906470 intron,3` UTR Flo2 +,CG9509 - chrX 14908612 intron,intron Flo2 +,CG9509 - chrX 14910753 intron,exon Flo2 +,CG14406 - chrX_6_14905001 chrX_14905001 RAL-45 1382 chrX 15273709 15273723 chrX 15274871 15274890 1360 4 1164 8.0 6.5 7.2 0.5 1181 chrX 15273709 intergenic not near genes chrX 15274300 intergenic not near genes chrX 15274890 intergenic not near genes chrX_4_15270001 chrX_15270001 RAL-45 1383 chrX 15369846 15369864 chrX 15369929 15369947 4 83 2.0 2.5 2.2 1.2 101 chrX 15369846 intron acj6 - chrX 15369896 intron acj6 - chrX 15369947 intron acj6 - chrX_4_15365001 chrX_15365001 RAL-45 1384 chrX 15373149 15373166 chrX 15373282 15373299 4 132 3.0 2.0 2.5 1.1 150 chrX 15373149 intron acj6 - chrX 15373224 intron acj6 - chrX 15373299 intron acj6 - chrX_4_15370001 chrX_15370001 RAL-45 1385 chrX 15379871 15379891 chrX 15380121 15380142 8 251 2.0 2.0 2.0 2.7 271 chrX 15379871 intergenic CG9164 - chrX 15380006 intergenic CG9164 - chrX 15380142 intergenic CG9164 - chrX_8_15380001 chrX_15380001 RAL-45 1386 chrX 15413052 15413083 chrX 15417354 15417385 Juan 7 4302 3.0 2.5 2.8 1.8 4333 chrX 15413052 intron Cngl - chrX 15415218 intron Cngl - chrX 15417385 intron Cngl - chrX_7_15415001 chrX_15415001 RAL-45 1387 chrX 15429229 15429258 chrX 15429312 15429341 7 83 0.5 1.0 0.8 3.9 112 chrX 15429229 intron Cngl - chrX 15429285 intron Cngl - chrX 15429341 intron Cngl - chrX_7_15425001 chrX_15425001 RAL-45 1388 chrX 15435688 15435705 chrX 15436121 15436138 rover 6 432 0.0 4.0 2.0 2.0 450 chrX 15435688 intron Cngl - chrX 15435913 intron Cngl - chrX 15436138 intron Cngl - chrX_6_15435001 chrX_15435001 RAL-45 1389 chrX 15543278 15543297 chrX 15543354 15543373 5 79 1.5 5.5 3.5 1.1 95 chrX 15543278 intron Ac13E - chrX 15543326 intron Ac13E - chrX 15543373 intron Ac13E - chrX_5_15540001 chrX_15540001 RAL-45 1390 chrX 15678050 15678066 chrX 15678126 15678143 9 77 2.0 3.0 2.5 2.6 93 chrX 15678050 intergenic CG12708 + chrX 15678096 intergenic CG12708 + chrX 15678143 intergenic CG12708 + chrX_9_15675001 chrX_15675001 RAL-45 1391 chrX 16278281 16278318 chrX 16278359 16278396 6 77 0.5 2.0 1.2 2.7 115 chrX 16278281 intergenic eas + chrX 16278338 5` UTR eas + chrX 16278396 5` UTR eas + chrX_6_16275001 chrX_16275001 RAL-45 1392 chrX 16492644 16492673 chrX 16498221 16498250 mdg3 5 5577 1.5 2.5 2.0 1.7 5606 chrX 16492644 intron para - chrX 16495447 intron para - chrX 16498250 intron para - chrX_5_16495001 chrX_16495001 RAL-45 1393 chrX 16841406 16841419 chrX 16841483 16841497 5 78 3.5 0.5 2.0 1.7 91 chrX 16841406 exon RSG7 - chrX 16841452 intron RSG7 - chrX 16841497 intron RSG7 - chrX_5_16840001 chrX_16840001 RAL-45 1394 chrX 16936011 16936029 chrX 16936429 16936447 jockey 5 418 0.0 1.0 0.5 3.3 436 chrX 16936011 intron CG4928 + chrX 16936229 intron CG4928 + chrX 16936447 intron CG4928 + chrX_5_16935001 chrX_16935001 RAL-45 1395 chrX 17011966 17011998 chrX 17012048 17012077 9 81 1.0 1.0 1.0 4.5 111 chrX 17011966 intron CG45002 - chrX 17012022 intron CG45002 - chrX 17012077 intron CG45002 - chrX_9_17010001 chrX_17010001 RAL-45 1396 chrX 17061575 17061589 chrX 17061698 17061712 7 122 1.0 2.0 1.5 2.8 137 chrX 17061575 intron CG45002 - chrX 17061644 intron CG45002 - chrX 17061712 intron CG45002 - chrX_7_17060001 chrX_17060001 RAL-45 1397 chrX 17282875 17282903 chrX 17282953 17282981 12 78 3.0 0.0 1.5 4.8 106 chrX 17282875 intron CG5445 + chrX 17282928 5` UTR CG5445 + chrX 17282981 intron CG5445 + chrX_12_17280001 chrX_17280001 RAL-45 1398 chrX 17352600 17352621 chrX 17352703 17352724 4 103 0.0 1.0 0.5 2.7 124 chrX 17352600 intergenic not near genes chrX 17352662 intergenic not near genes chrX 17352724 intergenic not near genes chrX_4_17350001 chrX_17350001 RAL-45 1399 chrX 17360319 17360343 chrX 17360413 17360438 9 95 1.0 2.5 1.8 3.2 119 chrX 17360319 intergenic not near genes chrX 17360378 intergenic not near genes chrX 17360438 intergenic not near genes chrX_9_17360001 chrX_17360001 RAL-45 1400 chrX 17545017 17545033 chrX 17545099 17545115 4 82 2.0 4.5 3.2 1.0 98 chrX 17545017 intron CG43658 - chrX 17545066 intron CG43658 - chrX 17545115 intron CG43658 - chrX_4_17545001 chrX_17545001 RAL-45 1401 chrX 17716593 17716603 chrX 17716673 17716689 4 84 4.5 1.0 2.8 1.1 96 chrX 17716593 intron CG42684 + chrX 17716641 intron CG42684 + chrX 17716689 intron CG42684 + chrX_4_17715001 chrX_17715001 RAL-45 1402 chrX 17792951 17792981 chrX 17796249 17796279 flea 5 3298 5.0 1.5 3.2 1.2 3328 chrX 17792951 intron OdsH + chrX 17794615 intron OdsH + chrX 17796279 intron OdsH + chrX_5_17790001 chrX_17790001 RAL-45 1403 chrX 17945569 17945596 chrX 17945698 17945722 4 128 3.0 2.0 2.5 1.1 153 chrX 17945569 intron Sh - chrX 17945646 intron Sh - chrX 17945722 intron Sh - chrX_4_17945001 chrX_17945001 RAL-45 1404 chrX 18467227 18467257 chrX 18467391 18467421 9 164 0.0 2.5 1.2 4.1 194 chrX 18467227 intron CG32547 - chrX 18467324 intron CG32547 - chrX 18467421 intron CG32547 - chrX_9_18465001 chrX_18465001 RAL-45 1405 chrX 18486113 18486142 chrX 18486202 18486231 10 89 2.0 4.0 3.0 2.5 118 chrX 18486113 exon psh - chrX 18486172 intron psh - chrX 18486231 intron psh - chrX_10_18485001 chrX_18485001 RAL-45 1406 chrX 18490075 18490099 chrX 18490190 18490221 8 117 1.5 2.5 2.0 2.7 146 chrX 18490075 intergenic CG15046 - chrX 18490148 intergenic not near genes chrX 18490221 intergenic not near genes chrX_8_18490001 chrX_18490001 RAL-45 1407 chrX 18645021 18645038 chrX 18645119 18645135 4 98 0.5 5.0 2.8 1.1 114 chrX 18645021 intron Rip11 - chrX 18645078 intron Rip11 - chrX 18645135 intron Rip11 - chrX_4_18645001 chrX_18645001 RAL-45 1408 chrX 18646902 18646928 chrX 18646986 18646997 7 81 3.0 3.5 3.2 1.7 95 chrX 18646902 intron Rip11 - chrX 18646950 intron Rip11 - chrX 18646997 intron Rip11 - chrX_7_18645001 chrX_18645001 RAL-45 1409 chrX 18768679 18768691 chrX 18768793 18768805 4 114 2.5 1.5 2.0 1.3 126 chrX 18768679 intron CCKLR-17D3 - chrX 18768742 intron CCKLR-17D3 - chrX 18768805 intron CCKLR-17D3 - chrX_4_18765001 chrX_18765001 RAL-45 1410 chrX 18774451 18774471 chrX 18774535 18774556 6 85 3.0 3.0 3.0 1.5 105 chrX 18774451 intergenic CCKLR-17D3 - chrX 18774504 intergenic CCKLR-17D3 - chrX 18774556 intergenic not near genes chrX_6_18770001 chrX_18770001 RAL-45 1411 chrX 18896521 18896538 chrX 18896632 18896648 4 111 1.0 0.5 0.8 2.2 127 chrX 18896521 3` UTR CG7349 + chrX 18896584 intergenic CG7349 + chrX 18896648 intergenic CG7349 + chrX_4_18895001 chrX_18895001 RAL-45 1412 chrX 19048223 19048256 chrX 19048313 19048346 7 90 1.5 2.0 1.8 2.5 123 chrX 19048223 intergenic not near genes chrX 19048284 intergenic not near genes chrX 19048346 intergenic not near genes chrX_7_19045001 chrX_19045001 RAL-45 1413 chrX 19060408 19060439 chrX 19065192 19065223 Doc 8 4784 1.0 1.5 1.2 3.6 4815 chrX 19060408 intron CG14190 + chrX 19062816 intron CG14190 + chrX 19065223 intron CG14190 + chrX_8_19060001 chrX_19060001 RAL-45 1414 chrX 19080352 19080356 chrX 19080458 19080462 4 106 0.0 5.0 2.5 1.1 110 chrX 19080352 intergenic not near genes chrX 19080407 intergenic not near genes chrX 19080462 intergenic not near genes chrX_4_19080001 chrX_19080001 RAL-45 1415 chrX 19109112 19109136 chrX 19109296 19109320 4 184 0.0 0.5 0.2 3.3 208 chrX 19109112 intergenic not near genes chrX 19109216 intergenic not near genes chrX 19109320 intergenic not near genes chrX_4_19105001 chrX_19105001 RAL-45 1416 chrX 19131970 19131988 chrX 19132053 19132071 8 83 1.5 5.0 3.2 1.9 101 chrX 19131970 intergenic not near genes chrX 19132020 intergenic not near genes chrX 19132071 intergenic not near genes chrX_8_19130001 chrX_19130001 RAL-45 1417 chrX 19472133 19472152 chrX 19472703 19472703 jockey 7 567 1.0 5.5 3.2 1.7 570 chrX 19472133 intergenic kek5 + chrX 19472418 intergenic not near genes chrX 19472703 intergenic not near genes chrX_7_19470001 chrX_19470001 RAL-45 1418 chrX 19576560 19576588 chrX 19576638 19576665 9 78 0.5 3.5 2.0 3.0 105 chrX 19576560 intron Tao - chrX 19576612 intron Tao - chrX 19576665 intron Tao - chrX_9_19575001 chrX_19575001 RAL-45 1419 chrX 19662033 19662057 chrX 19662256 19662280 4 223 1.0 0.5 0.8 2.2 247 chrX 19662033 intron CG14223 - chrX 19662156 intron CG14223 - chrX 19662280 intron CG14223 - chrX_4_19660001 chrX_19660001 RAL-45 1420 chrX 19710073 19710098 chrX 19711859 19711884 S-element 5 1786 3.0 4.0 3.5 1.1 1811 chrX 19710073 intron meso18E - chrX 19710978 intron meso18E - chrX 19711884 intron meso18E - chrX_5_19710001 chrX_19710001 RAL-45 1421 chrX 19744626 19744651 chrX 19744752 19744760 5 116 14.0 13.5 13.8 0.3 134 chrX 19744626 5` UTR,exon CG33932 +,Rpp20 + chrX 19744693 intron,intron CG33932 +,Rpp20 + chrX 19744760 5` UTR,exon CG33932 +,Rpp20 + chrX_5_19740001 chrX_19740001 RAL-45 1422 chrX 19884091 19884118 chrX 19884167 19884194 5 75 2.0 1.0 1.5 2.0 103 chrX 19884091 intron Hers + chrX 19884142 intron Hers + chrX 19884194 intron Hers + chrX_5_19880001 chrX_19880001 RAL-45 1423 chrX 19992420 19992434 chrX 19992496 19992510 7 76 4.5 7.0 5.8 1.0 90 chrX 19992420 intergenic not near genes chrX 19992465 intergenic not near genes chrX 19992510 intergenic not near genes chrX_7_19990001 chrX_19990001 RAL-45 1424 chrX 20096971 20096974 chrX 20111680 20111685 4 14706 0.5 15.5 8.0 0.4 14714 chrX 20096971 intergenic CG42581 - chrX 20104328 intergenic not near genes chrX 20111685 intergenic not near genes chrX_4_20100001 chrX_20100001 RAL-45 1425 chrX 20144851 20144875 chrX 20145021 20145040 4 169 3.0 2.5 2.8 1.1 189 chrX 20144851 intergenic not near genes chrX 20144946 intergenic not near genes chrX 20145040 intergenic not near genes chrX_4_20140001 chrX_20140001 RAL-45 1426 chrX 20359151 20359171 chrX 20359228 20359249 4 78 0.5 2.0 1.2 1.8 98 chrX 20359151 intergenic not near genes chrX 20359200 intergenic not near genes chrX 20359249 intergenic not near genes chrX_4_20355001 chrX_20355001 RAL-45 1427 chrX 20377327 20377349 chrX 20378794 20378816 hobo 10 1467 5.0 8.5 6.8 1.3 1489 chrX 20377327 intergenic not near genes chrX 20378072 intergenic not near genes chrX 20378816 intergenic not near genes chrX_10_20375001 chrX_20375001 RAL-45 1428 chrX 20464121 20464147 chrX 20467690 20467717 8 3570 17.0 25.5 21.2 0.4 3596 chrX 20464121 exon CG32506 + chrX 20465919 3` UTR CG32506 + chrX 20467717 5` UTR GstT3 + chrX_8_20465001 chrX_20465001 RAL-45 1429 chrX 20504131 20504140 chrX 20505651 20505660 transib2 8 1520 3.5 4.5 4.0 1.6 1529 chrX 20504131 intron RhoGAP19D - chrX 20504896 intron RhoGAP19D - chrX 20505660 intron RhoGAP19D - chrX_8_20500001 chrX_20500001 RAL-45 1430 chrX 20560260 20560276 chrX 20560351 20560376 4 98 1.0 0.0 0.5 2.7 116 chrX 20560260 intron RunxB + chrX 20560318 intron RunxB + chrX 20560376 intron RunxB + chrX_4_20560001 chrX_20560001 RAL-45 1431 chrX 20570782 20570796 chrX 20570867 20570881 4 85 0.5 1.0 0.8 2.2 99 chrX 20570782 intergenic not near genes chrX 20570832 intergenic not near genes chrX 20570881 intergenic not near genes chrX_4_20570001 chrX_20570001 RAL-45 1432 chrX 20814198 20814227 chrX 20814291 20814321 7 93 1.5 2.5 2.0 2.3 123 chrX 20814198 intron shakB - chrX 20814260 intron shakB - chrX 20814321 intron shakB - chrX_7_20810001 chrX_20810001 RAL-45 1433 chrX 20940727 20940753 chrX 20942193 20942222 hobo 13 1468 2.5 4.0 3.2 3.1 1495 chrX 20940727 intergenic not near genes chrX 20941474 intergenic not near genes chrX 20942222 intergenic not near genes chrX_13_20940001 chrX_20940001 RAL-45 1434 chrX 21042557 21042592 chrX 21045343 21045378 9 2785 27.5 20.0 23.8 0.4 2821 chrX 21042557 exon Mgstl + chrX 21043968 exon,3` UTR Mgstl +,CR44431 - chrX 21045378 intron Cbs + chrX_9_21040001 chrX_21040001 RAL-45 1435 chrX 21428335 21428358 chrX 21428525 21428548 4 190 0.5 0.0 0.2 3.3 213 chrX 21428335 intron CG42343 - chrX 21428442 intron CG42343 - chrX 21428548 intron CG42343 - chrX_4_21425001 chrX_21425001 RAL-45 1436 chrX 21467017 21467026 chrX 21467101 21467110 4 84 2.0 0.5 1.2 1.8 93 chrX 21467017 intergenic CR45507 - chrX 21467064 intergenic CR45507 - chrX 21467110 intergenic CR45507 - chrX_4_21465001 chrX_21465001 RAL-45 1437 chrX 21474408 21474431 chrX 21474774 21474797 1731 7 366 2.5 2.0 2.2 2.2 389 chrX 21474408 intergenic not near genes chrX 21474602 intergenic not near genes chrX 21474797 intergenic not near genes chrX_7_21470001 chrX_21470001 RAL-45 1438 chrX 22660576 22660601 chrX 22660660 22660679 4 82 0.5 1.0 0.8 2.2 103 chrX 22660576 intron CR44997 + chrX 22660628 intron CR44997 + chrX 22660679 intron CR44997 + chrX_4_22660001 chrX_22660001 RAL-45 1439 chrX 22771510 22771526 chrX 22774801 22774817 297 4 3291 2.0 1.5 1.8 1.4 3307 chrX 22771510 intron CR44997 + chrX 22773164 intron CR44997 + chrX 22774817 intron CR44997 + chrX_4_22770001 chrX_22770001 RAL-45 1440 chrX 22798772 22798802 chrX 22798889 22798919 7 117 1.0 1.0 1.0 3.5 147 chrX 22798772 intergenic not near genes chrX 22798846 intergenic not near genes chrX 22798919 intergenic not near genes chrX_7_22795001 chrX_22795001 RAL-45 1441 chrX 22825168 22825180 chrX 22825245 22825257 4 77 4.5 3.5 4.0 0.8 89 chrX 22825168 3` UTR fog - chrX 22825212 3` UTR fog - chrX 22825257 3` UTR fog - chrX_4_22825001 chrX_22825001 RAL-45 1442 chrX 22867977 22868001 chrX 22868091 22868115 7 114 1.5 0.0 0.8 3.9 138 chrX 22867977 exon CG42346 + chrX 22868046 intron CG42346 + chrX 22868115 intron CG42346 + chrX_7_22865001 chrX_22865001 RAL-45 1443 chrX 22870877 22870900 chrX 22870968 22870991 8 91 2.0 2.0 2.0 2.7 114 chrX 22870877 intron,3` UTR CG42346 +,CR43656 - chrX 22870934 intron,3` UTR CG42346 +,CR43656 - chrX 22870991 intron,3` UTR CG42346 +,CR43656 - chrX_8_22870001 chrX_22870001 RAL-45 1444 chrX 22996312 22996334 chrX 23003546 23003568 roo 4 7234 3.0 0.0 1.5 1.6 7256 chrX 22996312 intron,intron stnA -,stnB - chrX 22999940 intron,intron stnA -,stnB - chrX 23003568 intron,intron stnA -,stnB - chrX_4_22995001 chrX_22995001 RAL-45 1445 chrY 311342 311345 chrY 311459 311462 5 117 1.5 1.5 1.5 2.0 120 chrY 311342 intergenic not near genes chrY 311402 intergenic not near genes chrY 311462 intergenic not near genes chrY_5_310001 chrY_310001 RAL-45 1446 chrY 975600 975818 chrY 975716 975898 6 136 160.0 123.0 141.5 0.0 298 chrY 975600 intergenic not near genes chrY 975749 intergenic not near genes chrY 975898 intergenic not near genes chrY_6_975001 chrY_975001 RAL-45 1447 chrY 3666439 3666454 chrY 3666585 3666607 4 150 1.0 0.5 0.8 2.2 168 chrY 3666439 intergenic not near genes chrY 3666523 intergenic not near genes chrY 3666607 intergenic not near genes chrY_4_3665001 chrY_3665001 RAL-45