SV#	Chr	Chr_coord_5p	Chr_coord_3p	TE	TE_coord_start	TE_coord_end	Reads_collapsed	Chr_Coord_Dist	Symmetry	avg_blat_score	Norm_RefGen_Reads	Coverage_Ratio	classification	comments	insert_code	loci_code	Sym_score	libname
1	chr2L	134758	134871	S-element	1	5	5	113	'2-3	74.11	5.0	0.8	intron	CG11455 +	chr2L_5_130001	chr2L_130001	0.40	RAL-441
2	chr2L	505613	505731	297	392	2	9	118	'4-5	66.61	3.6	2.0	intron	ush +	chr2L_9_505001	chr2L_505001	0.44	RAL-441
3	chr2L	795393	795470	I-element	21	5343	6	77	'4-2	60.46	7.0	0.8	intergenic	not near genes	chr2L_6_795001	chr2L_795001	0.67	RAL-441
4	chr2L	967163	967278	blood	7009	7382	21	115	'13-8	66.98	6.3	2.9	intergenic	not near genes	chr2L_21_965001	chr2L_965001	0.62	RAL-441
5	chr2L	1376612	1376652	diver	5895	5886	8	40	'3-5	65.22	3.3	1.9	intergenic	not near genes	chr2L_8_1375001	chr2L_1375001	0.38	RAL-441
6	chr2L	1909559	1909677	blood	7389	7013	31	118	'19-12	60.65	4.2	6.0	intron	CG7337 +	chr2L_31_1905001	chr2L_1905001	0.61	RAL-441
7	chr2L	2098816	2098899	F-element	37	4683	23	83	'10-13	68.44	6.3	3.2	intron	dpr3 -	chr2L_23_2095001	chr2L_2095001	0.43	RAL-441
8	chr2L	2231701	2231803	opus	17	499	20	102	'7-13	71.26	3.5	4.4	3` UTR	Sec24CD -	chr2L_20_2230001	chr2L_2230001	0.35	RAL-441
9	chr2L	2429275	2429394	412	493	2	20	119	'10-10	62.92	4.7	3.5	intron	dpp +	chr2L_20_2425001	chr2L_2425001	0.50	RAL-441
10	chr2L	2480903	2481024	opus	7500	7114	17	121	'10-7	70.67	4.0	3.4	intergenic	not near genes	chr2L_17_2480001	chr2L_2480001	0.59	RAL-441
11	chr2L	2527372	2527418	jockey	4689	4670	13	46	'7-6	62.23	7.2	1.6	intergenic	not near genes	chr2L_13_2525001	chr2L_2525001	0.54	RAL-441
12	chr2L	2554270	2554379	roo	8	405	20	109	'12-8	70.14	4.6	3.6	intergenic	not near genes	chr2L_20_2550001	chr2L_2550001	0.60	RAL-441
13	chr2L	2616608	2616696	mdg1	24	412	18	88	'3-15	67.11	1.7	6.7	intergenic	not near genes	chr2L_18_2615001	chr2L_2615001	0.17	RAL-441
14	chr2L	3118134	3118244	Transpac	329	5226	20	110	'11-9	53.14	5.9	2.9	intron	toc -	chr2L_20_3115001	chr2L_3115001	0.55	RAL-441
15	chr2L	3141409	3141511	FB	2	13	23	102	'14-9	66.60	5.9	3.3	intron	toc -	chr2L_23_3140001	chr2L_3140001	0.61	RAL-441
16	chr2L	3158828	3158923	P-element	2886	2872	22	95	'15-7	47.53	3.5	4.9	intron	Mad -	chr2L_22_3155001	chr2L_3155001	0.68	RAL-441
17	chr2L	3174636	3174746	Ivk	5376	5312	4	110	'1-3	66.08	1.1	1.9	intergenic	CG15404 +	chr2L_4_3170001	chr2L_3170001	0.25	RAL-441
18	chr2L	3251359	3251471	Burdock	6136	6381	11	112	'8-3	65.41	5.8	1.6	intergenic	not near genes	chr2L_11_3250001	chr2L_3250001	0.73	RAL-441
19	chr2L	3836042	3836158	412	7545	4	19	116	'9-10	62.07	4.9	3.2	intergenic	not near genes	chr2L_19_3835001	chr2L_3835001	0.47	RAL-441
20	chr2L	3981351	3981464	opus	7499	11	17	113	'6-11	66.75	4.3	3.2	intron	fred -	chr2L_17_3980001	chr2L_3980001	0.35	RAL-441
21	chr2L	4132716	4132840	roo	412	8664	15	124	'11-4	63.19	4.0	3.0	intergenic	not near genes	chr2L_15_4130001	chr2L_4130001	0.73	RAL-441
22	chr2L	4345856	4345934	BS	5082	4991	14	78	'8-6	59.13	2.4	4.1	intergenic	Atet +	chr2L_14_4345001	chr2L_4345001	0.57	RAL-441
23	chr2L	4906723	4906826	P-element	9	2884	16	103	'9-7	54.61	5.1	2.6	5` UTR	CG2837 -	chr2L_16_4905001	chr2L_4905001	0.56	RAL-441
24	chr2L	5230869	5230972	opus	496	16	20	103	'13-7	65.99	5.4	3.1	intron	tkv -	chr2L_20_5230001	chr2L_5230001	0.65	RAL-441
25	chr2L	5310844	5310953	flea	4756	246	16	109	'7-9	66.07	6.0	2.3	3` UTR	vri +	chr2L_16_5310001	chr2L_5310001	0.44	RAL-441
26	chr2L	5339021	5339063	jockey	17	60	8	42	'7-1	61.13	5.6	1.2	intergenic	CG12512 -	chr2L_8_5335001	chr2L_5335001	0.88	RAL-441
27	chr2L	5665246	5665357	blood	8	7388	29	111	'12-17	68.15	6.7	3.8	intron	Hsp60C +	chr2L_29_5665001	chr2L_5665001	0.41	RAL-441
28	chr2L	5756723	5756771	jockey	4943	4988	11	48	'6-5	68.79	4.8	1.9	intron	CG11030 +	chr2L_11_5755001	chr2L_5755001	0.55	RAL-441
29	chr2L	5764591	5764708	roo	8663	404	29	117	'19-10	64.58	3.8	6.0	intron	obst-E -	chr2L_29_5760001	chr2L_5760001	0.66	RAL-441
30	chr2L	5877248	5877366	pogo	1	2096	20	118	'9-11	66.32	6.5	2.7	intron	rau -	chr2L_20_5875001	chr2L_5875001	0.45	RAL-441
31	chr2L	5900726	5900838	Transpac	4926	309	17	112	'7-10	65.12	2.7	4.6	intergenic	CR44579 -	chr2L_17_5900001	chr2L_5900001	0.41	RAL-441
32	chr2L	6398756	6398854	412	7070	7540	21	98	'11-10	64.92	5.7	3.1	intron	CG42368 -	chr2L_21_6395001	chr2L_6395001	0.52	RAL-441
33	chr2L	6876082	6876142	jockey	4950	4669	10	60	'5-5	65.75	5.5	1.5	intron	Nlg2 +	chr2L_10_6875001	chr2L_6875001	0.50	RAL-441
34	chr2L	7167245	7167357	flea	4764	255	10	112	'4-6	68.61	1.4	4.2	intergenic	not near genes	chr2L_10_7165001	chr2L_7165001	0.40	RAL-441
35	chr2L	7401857	7401902	X-element	4676	14	13	45	'4-9	55.15	3.4	3.0	intron	CG5171 +	chr2L_13_7400001	chr2L_7400001	0.31	RAL-441
36	chr2L	7919481	7919600	roo	411	8666	22	119	'13-9	64.54	5.5	3.4	intron	Snoo -	chr2L_22_7915001	chr2L_7915001	0.59	RAL-441
37	chr2L	8639560	8639647	297	22	393	4	87	'1-3	70.06	6.0	0.6	intron	Sema-1a +	chr2L_4_8635001	chr2L_8635001	0.25	RAL-441
38	chr2L	8749779	8749863	hobo	6	2924	19	84	'15-4	65.23	7.3	2.3	intergenic	not near genes	chr2L_19_8745001	chr2L_8745001	0.79	RAL-441
39	chr2L	8992617	8992709	pogo	19	2089	17	92	'14-3	64.65	2.6	4.7	intron	CG9555 +	chr2L_17_8990001	chr2L_8990001	0.82	RAL-441
40	chr2L	9042447	9042568	copia	4869	256	16	121	'14-2	65.57	4.4	3.0	intergenic	not near genes	chr2L_16_9040001	chr2L_9040001	0.88	RAL-441
41	chr2L	9805018	9805123	hobo	10	2936	16	105	'14-2	64.80	7.0	2.0	intron	nAChRalpha6 -	chr2L_16_9805001	chr2L_9805001	0.88	RAL-441
42	chr2L	9943374	9943485	roo	6	407	22	111	'8-14	62.43	6.4	3.0	intron	CG5853 -	chr2L_22_9940001	chr2L_9940001	0.36	RAL-441
43	chr2L	10047271	10047363	roo	17	402	8	92	'1-7	57.21	3.0	2.0	intergenic	not near genes	chr2L_8_10045001	chr2L_10045001	0.12	RAL-441
44	chr2L	10457401	10457499	Tirant	1	374	18	98	'10-8	65.80	6.1	2.5	intergenic	CG5322 -,LM408 +	chr2L_18_10455001	chr2L_10455001	0.56	RAL-441
45	chr2L	10554992	10555085	roo	1	9044	18	93	'10-8	65.45	4.6	3.2	intron	Trim9 +	chr2L_18_10550001	chr2L_10550001	0.56	RAL-441
46	chr2L	10691672	10691722	jockey	4810	4760	14	50	'7-7	61.70	4.9	2.4	intergenic	not near genes	chr2L_14_10690001	chr2L_10690001	0.50	RAL-441
47	chr2L	10900062	10900164	hobo	4	2933	14	102	'12-2	64.08	4.9	2.4	intergenic	CG14070 -	chr2L_14_10900001	chr2L_10900001	0.86	RAL-441
48	chr2L	11172756	11172844	Juan	4034	4203	8	88	'2-6	58.70	4.6	1.4	intron	Ca-beta -	chr2L_8_11170001	chr2L_11170001	0.25	RAL-441
49	chr2L	11174905	11175026	opus	7500	7114	26	121	'17-9	63.32	2.1	8.4	intron	Ca-beta -	chr2L_26_11170001	chr2L_11170001	0.65	RAL-441
50	chr2L	11573451	11573550	flea	227	4761	20	99	'9-11	70.87	4.8	3.4	intergenic	not near genes	chr2L_20_11570001	chr2L_11570001	0.45	RAL-441
51	chr2L	11592861	11592944	hobo	4	2926	15	83	'10-5	65.14	6.5	2.0	intron	kek2 +	chr2L_15_11590001	chr2L_11590001	0.67	RAL-441
52	chr2L	11697312	11697417	412	6	7537	14	105	'5-9	65.97	5.2	2.3	intergenic	not near genes	chr2L_14_11695001	chr2L_11695001	0.36	RAL-441
53	chr2L	12235448	12235574	roo	410	8663	4	126	'2-2	46.59	0.8	2.2	intron	aret +	chr2L_4_12235001	chr2L_12235001	0.50	RAL-441
54	chr2L	12268215	12268308	3S18	5795	343	4	93	'1-3	61.96	1.1	1.9	intron	aret +	chr2L_4_12265001	chr2L_12265001	0.25	RAL-441
55	chr2L	12459097	12459214	roo	410	5	32	117	'16-16	67.20	4.8	5.5	intron	bun -	chr2L_32_12455001	chr2L_12455001	0.50	RAL-441
56	chr2L	12757737	12757836	412	7542	18	15	99	'6-9	62.58	5.8	2.2	intergenic	not near genes	chr2L_15_12755001	chr2L_12755001	0.40	RAL-441
57	chr2L	12797665	12797781	pogo	2100	7	17	116	'7-10	67.92	3.6	3.7	intergenic	not near genes	chr2L_17_12795001	chr2L_12795001	0.41	RAL-441
58	chr2L	12855899	12856073	412	7176	7541	21	174	'5-16	64.60	4.9	3.6	intergenic	not near genes	chr2L_21_12855001	chr2L_12855001	0.24	RAL-441
59	chr2L	12896982	12897022	accord	7036	7033	5	40	'1-4	62.80	3.3	1.2	intergenic	not near genes	chr2L_5_12895001	chr2L_12895001	0.20	RAL-441
60	chr2L	13206895	13207005	Ivk	5373	7	19	110	'7-12	63.37	5.6	2.9	intron	Pect +	chr2L_19_13205001	chr2L_13205001	0.37	RAL-441
61	chr2L	13622551	13622668	roo	8	407	16	117	'11-5	62.20	3.9	3.3	intron	kuz +	chr2L_16_13620001	chr2L_13620001	0.69	RAL-441
62	chr2L	13685365	13685458	hobo	1	2937	25	93	'16-9	61.73	6.7	3.2	intron	CG31814 -	chr2L_25_13685001	chr2L_13685001	0.64	RAL-441
63	chr2L	14222251	14222358	Transpac	4934	310	8	107	'5-3	69.75	4.8	1.4	intron	Dyrk2 -	chr2L_8_14220001	chr2L_14220001	0.62	RAL-441
64	chr2L	14872598	14872711	roo	8666	9067	21	113	'11-10	67.68	4.2	4.0	intergenic	not near genes	chr2L_21_14870001	chr2L_14870001	0.52	RAL-441
65	chr2L	15760616	15760732	pogo	6	2099	33	116	'16-17	67.06	5.7	4.9	intron	Gli -	chr2L_33_15760001	chr2L_15760001	0.48	RAL-441
66	chr2L	15850185	15850299	copia	4	253	17	114	'12-5	66.44	5.4	2.7	intergenic	not near genes	chr2L_17_15850001	chr2L_15850001	0.71	RAL-441
67	chr2L	16137735	16137836	hobo	2934	12	12	101	'2-10	65.58	4.4	2.2	intergenic	not near genes	chr2L_12_16135001	chr2L_16135001	0.17	RAL-441
68	chr2L	16532926	16533034	P-element	4	5	21	108	'16-5	50.57	5.7	3.1	intergenic	CG5953 -	chr2L_21_16530001	chr2L_16530001	0.76	RAL-441
69	chr2L	16549194	16549276	roo	397	8691	11	82	'5-6	61.35	3.4	2.5	intron,3` UTR	CG42389 +,CG5968 -	chr2L_11_16545001	chr2L_16545001	0.45	RAL-441
70	chr2L	16582678	16582791	roo	1	403	23	113	'11-12	68.28	3.8	4.8	intron	CG42389 +	chr2L_23_16580001	chr2L_16580001	0.48	RAL-441
71	chr2L	16857270	16857311	BS	5083	5085	13	41	'9-4	64.13	9.5	1.2	intron	CG31809 -	chr2L_13_16855001	chr2L_16855001	0.69	RAL-441
72	chr2L	17066047	17066155	flea	249	4754	8	108	'4-4	65.98	2.6	2.2	intergenic	not near genes	chr2L_8_17065001	chr2L_17065001	0.50	RAL-441
73	chr2L	17123284	17123354	I-element	5334	13	12	70	'3-9	64.42	5.1	2.0	intergenic	CG31784 -	chr2L_12_17120001	chr2L_17120001	0.25	RAL-441
74	chr2L	17450404	17450515	P-element	2885	2886	12	111	'7-5	55.33	7.2	1.5	intergenic	dl -	chr2L_12_17450001	chr2L_17450001	0.58	RAL-441
75	chr2L	17610314	17610353	hobo	2916	2	5	39	'1-4	74.94	4.3	0.9	intergenic	not near genes	chr2L_5_17610001	chr2L_17610001	0.20	RAL-441
76	chr2L	17648321	17648416	roo	8682	402	12	95	'5-7	65.80	3.9	2.4	3` UTR	CadN -	chr2L_12_17645001	chr2L_17645001	0.42	RAL-441
77	chr2L	17730425	17730530	pogo	2098	7	18	105	'6-12	66.26	4.9	3.1	intron	CadN -	chr2L_18_17730001	chr2L_17730001	0.33	RAL-441
78	chr2L	18387660	18387757	1360	3388	3387	4	97	'2-2	65.65	5.1	0.7	intron	Fas3 +	chr2L_4_18385001	chr2L_18385001	0.50	RAL-441
79	chr2L	18415503	18415594	hobo	2932	19	19	91	'9-10	63.37	8.0	2.1	intergenic	not near genes	chr2L_19_18415001	chr2L_18415001	0.47	RAL-441
80	chr2L	18714430	18714469	Doc	16	6	10	39	'6-4	60.05	5.2	1.6	intergenic	CG10348 -	chr2L_10_18710001	chr2L_18710001	0.60	RAL-441
81	chr2L	18983602	18983711	pogo	2090	2	19	109	'3-16	67.50	3.6	4.1	intron	Swip-1 -	chr2L_19_18980001	chr2L_18980001	0.16	RAL-441
82	chr2L	19134478	19134522	jockey	4687	4673	7	44	'4-3	62.23	7.4	0.8	intron,intron	l(2)37Cg -,brat +	chr2L_7_19130001	chr2L_19130001	0.57	RAL-441
83	chr2L	19197868	19197991	roo	410	8664	18	123	'11-7	68.67	4.3	3.4	intron	drl +	chr2L_18_19195001	chr2L_19195001	0.61	RAL-441
84	chr2L	19477434	19477485	jockey	4667	4666	11	51	'6-5	63.49	5.4	1.7	intergenic	not near genes	chr2L_11_19475001	chr2L_19475001	0.55	RAL-441
85	chr2L	19936682	19936802	roo	8666	410	23	120	'8-15	69.43	5.3	3.7	intron	sick +	chr2L_23_19935001	chr2L_19935001	0.35	RAL-441
86	chr2L	20098836	20098963	opus	499	7113	12	127	'8-4	71.27	3.5	2.7	intron	Kua +	chr2L_12_20095001	chr2L_20095001	0.67	RAL-441
87	chr2L	20294503	20294552	Doc	68	33	9	49	'6-3	66.22	5.8	1.3	intergenic	CG12617 +	chr2L_9_20290001	chr2L_20290001	0.67	RAL-441
88	chr2L	20520907	20521008	copia	9	255	18	101	'9-9	66.78	5.7	2.7	intergenic	not near genes	chr2L_18_20520001	chr2L_20520001	0.50	RAL-441
89	chr2L	20672047	20672145	FB	6	13	18	98	'7-11	66.99	5.2	2.9	intron	CG31678 -	chr2L_18_20670001	chr2L_20670001	0.39	RAL-441
90	chr2L	20871693	20871791	412	13	484	13	98	'6-7	65.76	4.2	2.5	3` UTR,3` UTR	CG43739 -,sky -	chr2L_13_20870001	chr2L_20870001	0.46	RAL-441
91	chr2L	20878863	20878980	roo	8668	409	27	117	'17-10	66.32	6.2	3.8	intron,intron	CG43739 -,sky -	chr2L_27_20875001	chr2L_20875001	0.63	RAL-441
92	chr2L	21077940	21078023	flea	4771	4992	13	83	'9-4	64.56	3.4	3.0	intron	tadr +	chr2L_13_21075001	chr2L_21075001	0.69	RAL-441
93	chr2L	21361373	21361409	297	6925	6965	10	36	'6-4	62.76	14.8	0.6	5` UTR	dtr +	chr2L_10_21360001	chr2L_21360001	0.60	RAL-441
94	chr2L	21570224	21570254	Dm88	4386	4382	4	30	'2-2	63.82	4.3	0.8	intergenic	not near genes	chr2L_4_21570001	chr2L_21570001	0.50	RAL-441
95	chr2L	21826321	21826376	F-element	4655	465	4	55	'3-1	65.58	3.9	0.8	intergenic	not near genes	chr2L_4_21825001	chr2L_21825001	0.75	RAL-441
96	chr2L	22001239	22001305	I-element	4873	5346	6	66	'4-2	63.29	3.4	1.4	intergenic	not near genes	chr2L_6_22000001	chr2L_22000001	0.67	RAL-441
97	chr2L	22092963	22092996	INE-1	538	542	7	33	'2-5	61.59	4.8	1.2	intergenic	not near genes	chr2L_7_22090001	chr2L_22090001	0.29	RAL-441
98	chr2L	22104372	22104401	flea	4757	4795	11	29	'8-3	66.13	8.8	1.1	5` UTR	CG31703 -	chr2L_11_22100001	chr2L_22100001	0.73	RAL-441
99	chr2L	22165368	22165466	pogo	2	2080	15	98	'11-4	64.67	3.5	3.3	3` UTR	CG42748 +	chr2L_15_22165001	chr2L_22165001	0.73	RAL-441
100	chr2L	22198959	22199076	HMS-Beagle2	7199	6900	18	117	'7-11	65.55	16.0	1.1	intron	Ir40a -	chr2L_18_22195001	chr2L_22195001	0.39	RAL-441
101	chr2L	22224543	22224572	Rt1c	5400	5415	6	29	'4-2	61.29	1.8	2.1	intergenic	not near genes	chr2L_6_22220001	chr2L_22220001	0.67	RAL-441
102	chr2L	22294035	22294126	Max-element	8524	8250	12	91	'6-6	63.88	5.0	2.0	intergenic	not near genes	chr2L_12_22290001	chr2L_22290001	0.50	RAL-441
103	chr2L	22514740	22514778	HMS-Beagle2	7155	310	6	38	'4-2	65.43	8.4	0.6	intergenic	not near genes	chr2L_6_22510001	chr2L_22510001	0.67	RAL-441
104	chr2L	22748620	22748658	Tc3	1703	1702	6	38	'5-1	53.95	7.5	0.7	intron	CG40006 -	chr2L_6_22745001	chr2L_22745001	0.83	RAL-441
105	chr2L	23295840	23295880	micropia	42	8	9	40	'5-4	64.74	3.0	2.2	intergenic	not near genes	chr2L_9_23295001	chr2L_23295001	0.56	RAL-441
106	chr2R	330108	330225	HMS-Beagle2	308	6883	10	117	'3-7	69.86	1.2	4.5	intergenic	not near genes	chr2R_10_330001	chr2R_330001	0.30	RAL-441
107	chr2R	1320669	1320710	diver2	365	4857	34	41	'19-15	58.51	14.8	2.2	intergenic	not near genes	chr2R_34_1320001	chr2R_1320001	0.56	RAL-441
108	chr2R	1398680	1398727	Stalker2	48	7252	8	47	'5-3	64.31	3.0	2.0	intron	l(2)41Ab +	chr2R_8_1395001	chr2R_1395001	0.62	RAL-441
109	chr2R	1523032	1523126	HMS-Beagle	220	6798	15	94	'4-11	70.98	13.0	1.1	intron	Maf1 -	chr2R_15_1520001	chr2R_1520001	0.27	RAL-441
110	chr2R	2923619	2923738	pogo	3	2100	14	119	'8-6	64.14	10.0	1.3	intergenic	not near genes	chr2R_14_2920001	chr2R_2920001	0.57	RAL-441
111	chr2R	3594171	3594231	pogo	2075	16	9	60	'3-6	69.13	3.2	2.1	intergenic	not near genes	chr2R_9_3590001	chr2R_3590001	0.33	RAL-441
112	chr2R	4160907	4160950	gypsy	349	7338	4	43	'1-3	67.82	4.6	0.7	intergenic	not near genes	chr2R_4_4160001	chr2R_4160001	0.25	RAL-441
113	chr2R	4188963	4189094	S-element	1711	1707	13	131	'9-4	64.26	4.4	2.4	intergenic	not near genes	chr2R_13_4185001	chr2R_4185001	0.69	RAL-441
114	chr2R	4265339	4265448	flea	4763	5013	19	109	'10-9	65.19	7.9	2.1	intergenic	not near genes	chr2R_19_4265001	chr2R_4265001	0.53	RAL-441
115	chr2R	4673557	4673586	Quasimodo	7365	7335	6	29	'2-4	65.79	6.6	0.8	3` UTR	CG17883 +	chr2R_6_4670001	chr2R_4670001	0.33	RAL-441
116	chr2R	5010089	5010140	Porto1	4441	4391	15	51	'6-9	63.88	4.9	2.5	intron	Ir41a +	chr2R_15_5010001	chr2R_5010001	0.40	RAL-441
117	chr2R	5214950	5214988	F-element	16	54	6	38	'4-2	65.05	8.1	0.7	intron	Nipped-A -	chr2R_6_5210001	chr2R_5210001	0.67	RAL-441
118	chr2R	5401262	5401294	Quasimodo	11	15	4	32	'3-1	67.48	18.3	0.2	intergenic	not near genes	chr2R_4_5400001	chr2R_5400001	0.75	RAL-441
119	chr2R	5485048	5485156	1360	3382	4	29	108	'15-14	66.23	5.1	4.8	intron	CG30440 -	chr2R_29_5485001	chr2R_5485001	0.52	RAL-441
120	chr2R	5542213	5542332	opus	7115	7500	13	119	'3-10	67.69	5.1	2.1	intron	CG30438 +	chr2R_13_5540001	chr2R_5540001	0.23	RAL-441
121	chr2R	5674669	5674747	S-element	3	1709	10	78	'1-9	63.00	3.2	2.4	intergenic	not near genes	chr2R_10_5670001	chr2R_5670001	0.10	RAL-441
122	chr2R	6041550	6041646	flea	4762	244	13	96	'6-7	67.80	3.0	3.2	intergenic	not near genes	chr2R_13_6040001	chr2R_6040001	0.46	RAL-441
123	chr2R	6066415	6066528	Transpac	310	4926	19	113	'12-7	66.97	6.8	2.4	intron	CCHa2-R +	chr2R_19_6065001	chr2R_6065001	0.63	RAL-441
124	chr2R	6438334	6438368	Stalker4	397	371	10	34	'4-6	62.83	17.0	0.6	intergenic	not near genes	chr2R_10_6435001	chr2R_6435001	0.40	RAL-441
125	chr2R	6492892	6493002	copia	5	250	15	110	'10-5	64.11	4.4	2.8	intergenic	not near genes	chr2R_15_6490001	chr2R_6490001	0.67	RAL-441
126	chr2R	6682680	6682763	S-element	1709	1711	10	83	'2-8	69.62	2.3	3.0	intron,3` UTR	CG9422 +,CR44165 -	chr2R_10_6680001	chr2R_6680001	0.20	RAL-441
127	chr2R	7595763	7595797	S-element	1682	1715	6	34	'3-3	69.20	5.3	1.0	3` UTR	CG1358 -	chr2R_6_7595001	chr2R_7595001	0.50	RAL-441
128	chr2R	7605113	7605177	jockey	4975	4539	14	64	'7-7	59.42	6.8	1.8	intron	CG1358 -	chr2R_14_7605001	chr2R_7605001	0.50	RAL-441
129	chr2R	7851300	7851415	roo	8664	403	22	115	'12-10	68.33	6.1	3.1	intron	Dgk -	chr2R_22_7850001	chr2R_7850001	0.55	RAL-441
130	chr2R	7959970	7960073	Burdock	6139	243	14	103	'7-7	63.61	5.0	2.3	intron	CG2915 -	chr2R_14_7955001	chr2R_7955001	0.50	RAL-441
131	chr2R	8086866	8086965	1360	3374	2	27	99	'11-16	66.33	5.6	4.1	3` UTR	sut1 +	chr2R_27_8085001	chr2R_8085001	0.41	RAL-441
132	chr2R	8158856	8158967	pogo	7	2096	17	111	'11-6	68.24	3.8	3.5	intergenic	not near genes	chr2R_17_8155001	chr2R_8155001	0.65	RAL-441
133	chr2R	8310860	8310931	pogo	2060	5	16	71	'4-12	67.70	6.1	2.3	3` UTR	CR44449 -	chr2R_16_8310001	chr2R_8310001	0.25	RAL-441
134	chr2R	8434351	8434397	HMS-Beagle	6803	6995	8	46	'6-2	66.73	5.5	1.2	exon	Lcp2 -	chr2R_8_8430001	chr2R_8430001	0.75	RAL-441
135	chr2R	9003643	9003712	mdg3	5255	241	7	69	'3-4	66.50	5.6	1.1	intron	Np -	chr2R_7_9000001	chr2R_9000001	0.43	RAL-441
136	chr2R	9062217	9062322	hobo	2932	5	23	105	'5-18	62.25	3.3	5.3	intergenic	ana +,CG8197 -	chr2R_23_9060001	chr2R_9060001	0.22	RAL-441
137	chr2R	9068419	9068518	Tirant	1	397	14	99	'6-8	68.33	5.0	2.3	intron	ana +	chr2R_14_9065001	chr2R_9065001	0.43	RAL-441
138	chr2R	9183363	9183485	mdg3	5251	246	21	122	'9-12	69.03	4.1	4.1	intron	ltd -	chr2R_21_9180001	chr2R_9180001	0.43	RAL-441
139	chr2R	9299554	9299678	opus	498	113	12	124	'2-10	71.38	6.6	1.6	3` UTR	Drep-2 +	chr2R_12_9295001	chr2R_9295001	0.17	RAL-441
140	chr2R	9338987	9339058	Tirant	8108	8494	10	71	'2-8	68.19	4.0	2.0	intron,intron	CG13739 -,CG13954 -	chr2R_10_9335001	chr2R_9335001	0.20	RAL-441
141	chr2R	9408161	9408229	FB	7	41	16	68	'7-9	70.62	8.8	1.6	intron	wun -	chr2R_16_9405001	chr2R_9405001	0.44	RAL-441
142	chr2R	9552262	9552371	S-element	4	1705	11	109	'8-3	64.32	4.0	2.2	intergenic	not near genes	chr2R_11_9550001	chr2R_9550001	0.73	RAL-441
143	chr2R	9599392	9599498	hobo	5	2934	18	106	'11-7	60.31	4.1	3.5	intron,intron,exon	clos -,CG1902 +,CG30338 +	chr2R_18_9595001	chr2R_9595001	0.61	RAL-441
144	chr2R	9694275	9694379	roo	400	8669	23	104	'11-12	65.11	1.5	9.2	intergenic	not near genes	chr2R_23_9690001	chr2R_9690001	0.48	RAL-441
145	chr2R	9871002	9871048	roo	9027	404	12	46	'6-6	66.30	12.4	0.9	intron	cbx -	chr2R_12_9870001	chr2R_9870001	0.50	RAL-441
146	chr2R	9904528	9904640	roo	5	406	23	112	'13-10	68.26	4.6	4.1	intergenic	not near genes	chr2R_23_9900001	chr2R_9900001	0.57	RAL-441
147	chr2R	9953728	9953811	FB	21	13	18	83	'8-10	63.25	6.8	2.3	intron	Mef2 -	chr2R_18_9950001	chr2R_9950001	0.44	RAL-441
148	chr2R	10033150	10033256	Tabor	6853	484	13	106	'5-8	61.82	3.7	2.8	intergenic	CG12129 +,CG1407 -	chr2R_13_10030001	chr2R_10030001	0.38	RAL-441
149	chr2R	10040568	10040672	pogo	2089	3	16	104	'6-10	67.04	5.4	2.5	intron	oys -	chr2R_16_10040001	chr2R_10040001	0.38	RAL-441
150	chr2R	10050196	10050275	1360	3377	3198	19	79	'10-9	53.39	6.5	2.5	intergenic	CoVIIc +,CG44296 +	chr2R_19_10050001	chr2R_10050001	0.53	RAL-441
151	chr2R	10337940	10338047	opus	7113	495	18	107	'13-5	65.92	3.1	4.4	intron	CG42732 -	chr2R_18_10335001	chr2R_10335001	0.72	RAL-441
152	chr2R	10469070	10469118	Juan	4104	4175	10	48	'7-3	58.02	4.3	1.9	intron	CG11777 +	chr2R_10_10465001	chr2R_10465001	0.70	RAL-441
153	chr2R	10550127	10550200	1360	5	2	11	73	'1-10	65.51	1.6	4.2	intergenic	not near genes	chr2R_11_10550001	chr2R_10550001	0.09	RAL-441
154	chr2R	10698429	10698525	roo	409	8685	24	96	'12-12	65.06	5.6	3.6	intron	stan +	chr2R_24_10695001	chr2R_10695001	0.50	RAL-441
155	chr2R	10806209	10806288	pogo	2094	6	15	79	'5-10	63.11	5.6	2.3	intron	wde -	chr2R_15_10805001	chr2R_10805001	0.33	RAL-441
156	chr2R	10815253	10815283	pogo	2092	2080	8	30	'3-5	61.83	6.1	1.1	3` UTR	CG7222 +	chr2R_8_10815001	chr2R_10815001	0.38	RAL-441
157	chr2R	10994759	10994828	hopper	46	3	12	69	'2-10	61.16	2.7	3.2	intron	luna -	chr2R_12_10990001	chr2R_10990001	0.17	RAL-441
158	chr2R	11774718	11774832	roo	8664	402	13	114	'11-2	70.88	4.3	2.5	intron	ths +	chr2R_13_11770001	chr2R_11770001	0.85	RAL-441
159	chr2R	11935246	11935361	roo	407	8664	23	115	'10-13	66.77	4.3	4.3	intergenic	not near genes	chr2R_23_11935001	chr2R_11935001	0.43	RAL-441
160	chr2R	11938755	11938870	roo	8670	411	25	115	'9-16	65.72	4.1	4.9	intergenic	not near genes	chr2R_25_11935001	chr2R_11935001	0.36	RAL-441
161	chr2R	12185308	12185421	accord	7382	7	18	113	'11-7	63.65	13.3	1.3	3` UTR,3` UTR	CG13175 +,CG33964 +	chr2R_18_12185001	chr2R_12185001	0.61	RAL-441
162	chr2R	12319821	12319941	invader4	2758	324	12	120	'5-7	65.95	3.3	2.8	intergenic	not near genes	chr2R_12_12315001	chr2R_12315001	0.42	RAL-441
163	chr2R	12336627	12336673	pogo	4	3	12	46	'4-8	66.81	5.5	1.8	intergenic	CG34021 +,CG8490 +	chr2R_12_12335001	chr2R_12335001	0.33	RAL-441
164	chr2R	12664762	12664861	Transpac	5	296	26	99	'14-12	66.18	2.0	8.7	intron	nemy -	chr2R_26_12660001	chr2R_12660001	0.54	RAL-441
165	chr2R	12697483	12697597	roo	8660	403	12	114	'8-4	73.57	6.8	1.5	intergenic	not near genes	chr2R_12_12695001	chr2R_12695001	0.67	RAL-441
166	chr2R	12700844	12700923	F-element	48	17	4	79	'3-1	64.05	2.0	1.3	3` UTR	wuc +	chr2R_4_12700001	chr2R_12700001	0.75	RAL-441
167	chr2R	12812263	12812305	BS	2	21	10	42	'4-6	59.23	7.3	1.2	intergenic	not near genes	chr2R_10_12810001	chr2R_12810001	0.40	RAL-441
168	chr2R	13062949	13062995	blood	7340	374	26	46	'11-15	61.21	6.3	3.6	intron	Drl-2 -	chr2R_26_13060001	chr2R_13060001	0.42	RAL-441
169	chr2R	13505992	13506119	blood	7011	380	20	127	'11-9	62.54	3.0	5.0	3` UTR	mars +	chr2R_20_13505001	chr2R_13505001	0.55	RAL-441
170	chr2R	13640051	13640129	I-element	1	5325	16	78	'12-4	63.60	3.8	3.3	intron	fas +	chr2R_16_13640001	chr2R_13640001	0.75	RAL-441
171	chr2R	13671353	13671457	copia	4879	250	18	104	'12-6	65.88	2.2	5.6	intron,3` UTR	fas +,CG18368 +	chr2R_18_13670001	chr2R_13670001	0.67	RAL-441
172	chr2R	13751903	13751935	3S18	6055	6090	7	32	'4-3	66.31	7.3	0.8	intergenic	not near genes	chr2R_7_13750001	chr2R_13750001	0.57	RAL-441
173	chr2R	14388762	14388844	I-element	5337	15	9	82	'5-4	60.25	5.8	1.3	intergenic	not near genes	chr2R_9_14385001	chr2R_14385001	0.56	RAL-441
174	chr2R	14706940	14707053	hobo	2937	1	12	113	'1-11	68.51	5.6	1.8	intron	mspo -	chr2R_12_14705001	chr2R_14705001	0.08	RAL-441
175	chr2R	15374745	15374794	1360	2	221	9	49	'7-2	50.39	1.8	3.2	intergenic	not near genes	chr2R_9_15370001	chr2R_15370001	0.78	RAL-441
176	chr2R	15726052	15726090	hopper	1388	1410	13	38	'9-4	64.27	8.4	1.4	intergenic	not near genes	chr2R_13_15725001	chr2R_15725001	0.69	RAL-441
177	chr2R	15818437	15818473	mdg3	237	5449	13	36	'11-2	57.36	3.2	3.1	intron	tun +	chr2R_13_15815001	chr2R_15815001	0.85	RAL-441
178	chr2R	15900094	15900169	Idefix	10	7367	4	75	'2-2	61.95	4.8	0.7	intron	sli -	chr2R_4_15900001	chr2R_15900001	0.50	RAL-441
179	chr2R	16281347	16281441	I-element	5342	5	15	94	'1-14	58.27	4.4	2.8	intron	CG15705 +	chr2R_15_16280001	chr2R_16280001	0.07	RAL-441
180	chr2R	16413840	16413919	I-element	9	5335	12	79	'10-2	60.37	4.7	2.1	intron	Sema-2b +	chr2R_12_16410001	chr2R_16410001	0.83	RAL-441
181	chr2R	16493155	16493249	roo	409	8690	17	94	'12-5	64.38	4.7	3.0	3` UTR	S-Lap8 +	chr2R_17_16490001	chr2R_16490001	0.71	RAL-441
182	chr2R	16881780	16881886	roo	8671	402	17	106	'11-6	66.94	4.4	3.1	intron,intron	CG8910 -,CG6472 +	chr2R_17_16880001	chr2R_16880001	0.65	RAL-441
183	chr2R	16924627	16924657	jockey	4536	4536	15	30	'9-6	60.41	5.0	2.5	intergenic	Pkc53E +	chr2R_15_16920001	chr2R_16920001	0.60	RAL-441
184	chr2R	17241718	17241756	mdg3	5103	5103	5	38	'2-3	63.82	5.3	0.8	intron	mbl +	chr2R_5_17240001	chr2R_17240001	0.40	RAL-441
185	chr2R	17254635	17254747	opus	7114	498	11	112	'4-7	66.58	4.2	2.1	intron,intron	mbl +,CR43660 -	chr2R_11_17250001	chr2R_17250001	0.36	RAL-441
186	chr2R	17274559	17274661	pogo	2	2081	16	102	'8-8	65.98	3.2	3.8	intron	mbl +	chr2R_16_17270001	chr2R_17270001	0.50	RAL-441
187	chr2R	17359690	17359790	jockey	4983	4684	13	100	'9-4	61.31	5.7	1.9	intron	mbl +	chr2R_13_17355001	chr2R_17355001	0.69	RAL-441
188	chr2R	17850829	17850937	P-element	5	2882	33	108	'15-18	55.77	9.1	3.3	intron	olf186-F +	chr2R_33_17850001	chr2R_17850001	0.45	RAL-441
189	chr2R	18008189	18008268	pogo	20	2088	13	79	'4-9	61.77	2.6	3.6	intergenic	dpr13 -	chr2R_13_18005001	chr2R_18005001	0.31	RAL-441
190	chr2R	19253997	19254042	jockey	4687	4678	11	45	'4-7	64.68	7.5	1.3	intergenic	not near genes	chr2R_11_19250001	chr2R_19250001	0.36	RAL-441
191	chr2R	19319867	19319980	roo	8671	407	32	113	'24-8	65.17	7.7	3.7	intron	Rgk1 -	chr2R_32_19315001	chr2R_19315001	0.75	RAL-441
192	chr2R	19648141	19648206	roo	9026	5	19	65	'6-13	69.80	6.0	2.7	intergenic	CG15905 -	chr2R_19_19645001	chr2R_19645001	0.32	RAL-441
193	chr2R	19789120	19789165	412	461	7541	10	45	'3-7	65.07	3.4	2.3	5` UTR	CR45231 +	chr2R_10_19785001	chr2R_19785001	0.30	RAL-441
194	chr2R	20610469	20610565	mdg1	7443	7046	18	96	'14-4	62.06	3.8	3.8	intron	Hil -	chr2R_18_20610001	chr2R_20610001	0.78	RAL-441
195	chr2R	20795704	20795810	Max-element	8234	287	17	106	'7-10	62.56	3.8	3.5	intergenic	not near genes	chr2R_17_20795001	chr2R_20795001	0.41	RAL-441
196	chr2R	20970970	20971023	Doc	2	30	12	53	'3-9	68.85	6.5	1.6	intergenic	not near genes	chr2R_12_20970001	chr2R_20970001	0.25	RAL-441
197	chr2R	21607156	21607264	P-element	2877	2880	12	108	'5-7	53.39	4.6	2.1	5` UTR	CG10433 -	chr2R_12_21605001	chr2R_21605001	0.42	RAL-441
198	chr2R	21806311	21806415	copia	256	4885	7	104	'4-3	65.05	2.7	1.9	intergenic	not near genes	chr2R_7_21805001	chr2R_21805001	0.57	RAL-441
199	chr2R	22198119	22198233	pogo	2098	4	26	114	'11-15	65.71	3.9	5.3	intron	Swim -	chr2R_26_22195001	chr2R_22195001	0.42	RAL-441
200	chr2R	22460195	22460290	mdg1	416	7054	10	95	'5-5	60.91	4.5	1.8	intron	CG10384 +	chr2R_10_22460001	chr2R_22460001	0.50	RAL-441
201	chr2R	23055918	23056028	roo	403	2	25	110	'13-12	63.48	8.4	2.7	intron	CG44252 +	chr2R_25_23055001	chr2R_23055001	0.52	RAL-441
202	chr2R	23202911	23203022	Ivk	5320	5377	18	111	'12-6	64.26	4.3	3.4	intron	CG34371 -	chr2R_18_23200001	chr2R_23200001	0.67	RAL-441
203	chr2R	23275055	23275169	roo	3	9070	21	114	'9-12	67.99	5.3	3.3	5` UTR	ord -	chr2R_21_23275001	chr2R_23275001	0.43	RAL-441
204	chr2R	23580786	23580855	P-element	2842	2	17	69	'7-10	49.74	5.8	2.5	intron	apt +	chr2R_17_23580001	chr2R_23580001	0.41	RAL-441
205	chr2R	23750206	23750303	blood	7376	7021	15	97	'6-9	61.86	2.2	4.7	intergenic	CG12491 -,CG34105 -	chr2R_15_23750001	chr2R_23750001	0.40	RAL-441
206	chr2R	23925037	23925137	1360	3387	14	25	100	'13-12	67.19	6.2	3.5	3` UTR	kcc +	chr2R_25_23925001	chr2R_23925001	0.52	RAL-441
207	chr3L	685442	685522	P-element	2860	2886	16	80	'8-8	41.97	6.6	2.1	5` UTR	ebd1 -	chr3L_16_685001	chr3L_685001	0.50	RAL-441
208	chr3L	793674	793789	blood	7018	378	34	115	'15-19	62.89	7.0	4.2	intergenic	not near genes	chr3L_34_790001	chr3L_790001	0.44	RAL-441
209	chr3L	1545753	1545866	P-element	2883	2878	14	113	'9-5	45.86	5.9	2.0	intergenic	CG32313 -,Cct1 +	chr3L_14_1545001	chr3L_1545001	0.64	RAL-441
210	chr3L	2169090	2169203	roo	8668	405	26	113	'11-15	67.78	3.2	6.2	5` UTR	CG15879 -	chr3L_26_2165001	chr3L_2165001	0.42	RAL-441
211	chr3L	2609068	2609115	jockey	33	11	6	47	'4-2	60.92	5.4	0.9	intron	Pxn -	chr3L_6_2605001	chr3L_2605001	0.67	RAL-441
212	chr3L	2690791	2690868	Transpac	30	300	16	77	'4-12	69.44	5.1	2.6	intron	Fife -	chr3L_16_2690001	chr3L_2690001	0.25	RAL-441
213	chr3L	3240518	3240610	diver	6086	2	18	92	'7-11	62.24	6.1	2.5	intergenic	not near genes	chr3L_18_3240001	chr3L_3240001	0.39	RAL-441
214	chr3L	3267334	3267440	flea	4756	4999	18	106	'11-7	66.53	2.7	4.9	intron	ckd +	chr3L_18_3265001	chr3L_3265001	0.61	RAL-441
215	chr3L	3540120	3540230	mdg3	5488	5252	17	110	'7-10	63.04	3.6	3.7	intron	Eip63E +	chr3L_17_3540001	chr3L_3540001	0.41	RAL-441
216	chr3L	3623310	3623398	I-element	5345	5	14	88	'5-9	67.18	5.8	2.1	intergenic	not near genes	chr3L_14_3620001	chr3L_3620001	0.36	RAL-441
217	chr3L	3762891	3762950	roo	8675	358	5	59	'4-1	68.34	12.3	0.4	intron	CG32264 -	chr3L_5_3760001	chr3L_3760001	0.80	RAL-441
218	chr3L	3861410	3861495	rover	1	7289	5	85	'3-2	64.86	3.0	1.2	3` UTR	Awh +	chr3L_5_3860001	chr3L_3860001	0.60	RAL-441
219	chr3L	3972547	3972659	mdg1	418	6	7	112	'4-3	63.31	0.8	3.9	intergenic	CG43915 +	chr3L_7_3970001	chr3L_3970001	0.57	RAL-441
220	chr3L	4048602	4048709	copia	250	3	26	107	'7-19	66.54	5.4	4.1	intron	CG1136 +	chr3L_26_4045001	chr3L_4045001	0.27	RAL-441
221	chr3L	4071992	4072080	jockey	4975	4759	15	88	'7-8	63.32	5.6	2.3	intergenic	Faa -,wit -	chr3L_15_4070001	chr3L_4070001	0.47	RAL-441
222	chr3L	4467852	4467934	I-element	7	5332	14	82	'8-6	60.74	4.3	2.6	intergenic	not near genes	chr3L_14_4465001	chr3L_4465001	0.57	RAL-441
223	chr3L	4621148	4621207	FB	12	41	13	59	'6-7	70.84	6.3	1.8	intron	Src64B -	chr3L_13_4620001	chr3L_4620001	0.46	RAL-441
224	chr3L	4678896	4679011	opus	496	5	11	115	'7-4	65.58	4.1	2.2	intron	axo -	chr3L_11_4675001	chr3L_4675001	0.64	RAL-441
225	chr3L	4807434	4807549	pogo	7	2099	20	115	'9-11	68.13	2.9	5.1	3` UTR	Dhc64C -	chr3L_20_4805001	chr3L_4805001	0.45	RAL-441
226	chr3L	4897631	4897714	roo	8680	404	6	83	'5-1	59.32	5.7	0.9	exon	CG13705 +	chr3L_6_4895001	chr3L_4895001	0.83	RAL-441
227	chr3L	5288138	5288165	jockey	32	14	4	27	'3-1	60.47	4.2	0.8	intergenic	not near genes	chr3L_4_5285001	chr3L_5285001	0.75	RAL-441
228	chr3L	5405214	5405252	jockey	4564	4528	12	38	'8-4	58.07	5.6	1.8	intergenic	not near genes	chr3L_12_5405001	chr3L_5405001	0.67	RAL-441
229	chr3L	5436309	5436420	412	493	9	27	111	'20-7	65.42	5.1	4.4	exon	CG34391 +	chr3L_27_5435001	chr3L_5435001	0.74	RAL-441
230	chr3L	5919095	5919160	BS	5071	5065	6	65	'3-3	62.44	5.2	1.0	intron,5` UTR	CG10483 -,CR45167 +	chr3L_6_5915001	chr3L_5915001	0.50	RAL-441
231	chr3L	5946056	5946155	roo	8667	400	12	99	'9-3	58.30	6.1	1.7	intron	CG33993 -	chr3L_12_5945001	chr3L_5945001	0.75	RAL-441
232	chr3L	5966774	5966869	hopper	6	6	12	95	'7-5	64.27	7.1	1.5	intergenic	not near genes	chr3L_12_5965001	chr3L_5965001	0.58	RAL-441
233	chr3L	6554139	6554252	FB	1	1	24	113	'15-9	66.16	4.8	4.1	intron	CG18769 +	chr3L_24_6550001	chr3L_6550001	0.62	RAL-441
234	chr3L	7281189	7281306	mdg1	7043	422	15	117	'6-9	64.11	3.5	3.3	intron	unc-13-4A -	chr3L_15_7280001	chr3L_7280001	0.40	RAL-441
235	chr3L	7314662	7314760	hopper	1413	1408	8	98	'7-1	56.44	4.1	1.6	intergenic	not near genes	chr3L_8_7310001	chr3L_7310001	0.88	RAL-441
236	chr3L	7539638	7539752	roo	8668	406	32	114	'13-19	66.32	6.4	4.3	3` UTR,exon	lqf +,CG16998 -	chr3L_32_7535001	chr3L_7535001	0.41	RAL-441
237	chr3L	7781199	7781283	S-element	34	5	4	84	'1-3	70.59	6.4	0.5	intron	CG32369 -	chr3L_4_7780001	chr3L_7780001	0.25	RAL-441
238	chr3L	7915441	7915555	hopper	6	1414	18	114	'15-3	67.66	6.5	2.4	5` UTR	CG32368 +	chr3L_18_7915001	chr3L_7915001	0.83	RAL-441
239	chr3L	8218342	8218376	412	7088	7073	7	34	'4-3	67.10	4.0	1.4	3` UTR	CG13674 -	chr3L_7_8215001	chr3L_8215001	0.57	RAL-441
240	chr3L	8395183	8395226	BS	4792	4835	14	43	'4-10	62.26	9.5	1.3	intergenic	not near genes	chr3L_14_8395001	chr3L_8395001	0.29	RAL-441
241	chr3L	8828972	8829065	1360	3387	3383	22	93	'17-5	67.70	5.9	3.2	intron	dally +	chr3L_22_8825001	chr3L_8825001	0.77	RAL-441
242	chr3L	9042821	9042928	rover	7284	6951	9	107	'1-8	66.11	5.7	1.3	intron	Doc1 +	chr3L_9_9040001	chr3L_9040001	0.11	RAL-441
243	chr3L	9317352	9317462	mdg3	240	5257	16	110	'7-9	65.28	5.9	2.3	intergenic	not near genes	chr3L_16_9315001	chr3L_9315001	0.44	RAL-441
244	chr3L	9417918	9418013	1360	3380	3384	8	95	'5-3	59.49	6.3	1.1	intron	CG3967 -	chr3L_8_9415001	chr3L_9415001	0.62	RAL-441
245	chr3L	9763308	9763430	pogo	1	2100	20	122	'9-11	69.32	4.3	3.8	intergenic	CG8177 +	chr3L_20_9760001	chr3L_9760001	0.45	RAL-441
246	chr3L	9848392	9848509	297	6581	390	14	117	'6-8	68.22	3.7	3.0	intron	RasGAP1 -	chr3L_14_9845001	chr3L_9845001	0.43	RAL-441
247	chr3L	10035217	10035309	BS	5004	5083	12	92	'9-3	65.53	4.3	2.3	intron	dpr6 +	chr3L_12_10035001	chr3L_10035001	0.75	RAL-441
248	chr3L	10037706	10037816	pogo	2094	4	22	110	'11-11	66.52	4.6	3.9	intron	dpr6 +	chr3L_22_10035001	chr3L_10035001	0.50	RAL-441
249	chr3L	10551477	10551576	pogo	2099	25	12	99	'5-7	63.95	1.2	5.5	intron	A2bp1 +	chr3L_12_10550001	chr3L_10550001	0.42	RAL-441
250	chr3L	10728145	10728263	mdg3	5497	5253	14	118	'3-11	61.89	2.7	3.8	intergenic	not near genes	chr3L_14_10725001	chr3L_10725001	0.21	RAL-441
251	chr3L	11196294	11196393	FB	7	11	21	99	'9-12	63.04	4.4	3.9	intron	GlcAT-P -	chr3L_21_11195001	chr3L_11195001	0.43	RAL-441
252	chr3L	11275180	11275219	flea	250	4960	9	39	'4-5	62.94	7.7	1.0	intergenic	not near genes	chr3L_9_11275001	chr3L_11275001	0.44	RAL-441
253	chr3L	11661693	11661809	hopper	3	1412	18	116	'9-9	63.09	4.9	3.1	intron	CG32085 -	chr3L_18_11660001	chr3L_11660001	0.50	RAL-441
254	chr3L	11810462	11810541	Quasimodo	2	7330	6	79	'4-2	72.93	5.4	0.9	exon	CG42255 -	chr3L_6_11810001	chr3L_11810001	0.67	RAL-441
255	chr3L	11819110	11819224	17.6	3	7414	12	114	'7-5	70.97	3.5	2.7	intron	CG5946 -	chr3L_12_11815001	chr3L_11815001	0.58	RAL-441
256	chr3L	11887258	11887367	Bari1	119	6	25	109	'10-15	64.04	4.8	4.3	intron,3` UTR	CG44837 -,CG5897 -	chr3L_25_11885001	chr3L_11885001	0.40	RAL-441
257	chr3L	12034867	12035007	Transpac	4920	306	21	140	'13-8	67.76	3.6	4.6	intron	rols -	chr3L_21_12030001	chr3L_12030001	0.62	RAL-441
258	chr3L	12640323	12640410	roo	397	8698	11	87	'6-5	70.57	1.9	3.8	intron	CR32111 +	chr3L_11_12640001	chr3L_12640001	0.55	RAL-441
259	chr3L	12646210	12646272	hobo	2912	9	10	62	'3-7	58.80	1.8	3.6	5` UTR	CR32111 +	chr3L_10_12645001	chr3L_12645001	0.30	RAL-441
260	chr3L	12865296	12865395	hopper	13	6	20	99	'8-12	64.35	3.0	5.0	intergenic	not near genes	chr3L_20_12865001	chr3L_12865001	0.40	RAL-441
261	chr3L	13015527	13015593	1360	3374	26	4	66	'1-3	56.70	1.1	1.9	intergenic	MICAL-like -	chr3L_4_13015001	chr3L_13015001	0.25	RAL-441
262	chr3L	13426686	13426800	Transpac	310	4927	27	114	'21-6	66.07	6.0	3.9	intergenic	CG14105 -	chr3L_27_13425001	chr3L_13425001	0.78	RAL-441
263	chr3L	13628708	13628781	copia	242	4891	11	73	'7-4	63.69	3.8	2.3	intron	bru-3 -	chr3L_11_13625001	chr3L_13625001	0.64	RAL-441
264	chr3L	13776065	13776160	gypsy10	6	340	14	95	'10-4	65.76	5.6	2.1	intron	bru-3 -	chr3L_14_13775001	chr3L_13775001	0.71	RAL-441
265	chr3L	14302103	14302180	Burdock	12	6383	13	77	'12-1	64.55	3.2	3.1	intron	fz +	chr3L_13_14300001	chr3L_14300001	0.92	RAL-441
266	chr3L	14377749	14377783	Max-element	33	12	7	34	'3-4	70.32	14.7	0.4	intergenic	not near genes	chr3L_7_14375001	chr3L_14375001	0.43	RAL-441
267	chr3L	14554269	14554312	I-element	5340	5298	8	43	'3-5	62.16	6.6	1.1	intergenic	not near genes	chr3L_8_14550001	chr3L_14550001	0.38	RAL-441
268	chr3L	14585799	14585938	Tc1	115	135	11	139	'1-10	60.58	2.0	3.7	intron	HGTX -	chr3L_11_14585001	chr3L_14585001	0.09	RAL-441
269	chr3L	14946623	14946731	412	482	2	13	108	'4-9	67.47	4.4	2.4	intergenic	BobA -	chr3L_13_14945001	chr3L_14945001	0.31	RAL-441
270	chr3L	15099567	15099641	G4	3806	3804	5	74	'1-4	43.44	3.7	1.1	intron	CTPsyn +	chr3L_5_15095001	chr3L_15095001	0.20	RAL-441
271	chr3L	15192500	15192611	roo	8668	406	28	111	'14-14	68.26	5.4	4.4	intergenic	not near genes	chr3L_28_15190001	chr3L_15190001	0.50	RAL-441
272	chr3L	15273093	15273194	roo	403	4	21	101	'7-14	62.59	5.8	3.1	intergenic	not near genes	chr3L_21_15270001	chr3L_15270001	0.33	RAL-441
273	chr3L	15532600	15532669	P-element	2848	2	10	69	'7-3	40.33	8.3	1.1	intergenic	not near genes	chr3L_10_15530001	chr3L_15530001	0.70	RAL-441
274	chr3L	15783496	15783576	Juan	4201	6	4	80	'1-3	58.72	2.8	1.1	intergenic	not near genes	chr3L_4_15780001	chr3L_15780001	0.25	RAL-441
275	chr3L	16046849	16046943	P-element	2	2878	7	94	'3-4	50.41	10.6	0.6	intron	th -	chr3L_7_16045001	chr3L_16045001	0.43	RAL-441
276	chr3L	16137301	16137383	Juan	4041	4210	11	82	'8-3	56.46	6.9	1.4	5` UTR	CG5157 -	chr3L_11_16135001	chr3L_16135001	0.73	RAL-441
277	chr3L	16842218	16842312	P-element	2872	2878	16	94	'5-11	46.16	5.7	2.4	intergenic	TSG101 +	chr3L_16_16840001	chr3L_16840001	0.31	RAL-441
278	chr3L	16873135	16873235	flea	5007	4771	12	100	'7-5	69.68	6.6	1.6	intron	Lmpt +	chr3L_12_16870001	chr3L_16870001	0.58	RAL-441
279	chr3L	16908651	16908767	copia	254	3	15	116	'7-8	66.81	4.5	2.7	intron	Lmpt +	chr3L_15_16905001	chr3L_16905001	0.47	RAL-441
280	chr3L	17055503	17055609	P-element	2883	1	5	106	'2-3	60.53	8.7	0.5	intergenic	rogdi +,CG7724 +	chr3L_5_17055001	chr3L_17055001	0.40	RAL-441
281	chr3L	17251499	17251596	Tirant	8116	8501	20	97	'4-16	64.43	3.5	4.4	intron	CR43870 +	chr3L_20_17250001	chr3L_17250001	0.20	RAL-441
282	chr3L	17700878	17701043	hobo	3	7	13	165	'2-11	65.43	4.2	2.5	intron	Ccn +	chr3L_13_17700001	chr3L_17700001	0.15	RAL-441
283	chr3L	17841091	17841175	P-element	7	22	16	84	'10-6	43.37	7.8	1.8	intron	CG5577 -	chr3L_16_17840001	chr3L_17840001	0.62	RAL-441
284	chr3L	18029500	18029616	hobo	2938	1	7	116	'5-2	64.05	4.0	1.4	intron	Eip75B -	chr3L_7_18025001	chr3L_18025001	0.71	RAL-441
285	chr3L	18476860	18476959	pogo	6	2082	12	99	'8-4	66.14	5.1	2.0	intergenic	not near genes	chr3L_12_18475001	chr3L_18475001	0.67	RAL-441
286	chr3L	18481833	18481944	roo	2	401	17	111	'6-11	68.60	3.0	4.2	intergenic	not near genes	chr3L_17_18480001	chr3L_18480001	0.35	RAL-441
287	chr3L	18550250	18550337	17.6	7	475	10	87	'5-5	64.13	4.0	2.0	intergenic	not near genes	chr3L_10_18550001	chr3L_18550001	0.50	RAL-441
288	chr3L	18606922	18607042	roo	8664	410	22	120	'11-11	72.13	4.8	3.8	intron,intron,exon	CG13380 -,CG4174 -,CG18233 +	chr3L_22_18605001	chr3L_18605001	0.50	RAL-441
289	chr3L	18625014	18625116	blood	7029	376	22	102	'9-13	64.13	5.6	3.3	intergenic	bora +	chr3L_22_18625001	chr3L_18625001	0.41	RAL-441
290	chr3L	18636259	18636345	FB	1	3	26	86	'12-14	65.48	6.8	3.3	intron	MYPT-75D +	chr3L_26_18635001	chr3L_18635001	0.46	RAL-441
291	chr3L	18646102	18646207	hopper	1410	7	13	105	'5-8	65.12	4.6	2.3	intron	MYPT-75D +	chr3L_13_18645001	chr3L_18645001	0.38	RAL-441
292	chr3L	18968771	18968856	jockey	30	4982	14	85	'6-8	59.62	5.3	2.2	intergenic	not near genes	chr3L_14_18965001	chr3L_18965001	0.43	RAL-441
293	chr3L	19039485	19039591	hobo	4	2935	6	106	'5-1	65.31	5.7	0.9	intron	nkd -	chr3L_6_19035001	chr3L_19035001	0.83	RAL-441
294	chr3L	19040887	19040988	pogo	4	2090	17	101	'16-1	67.30	4.8	2.9	intron	nkd -	chr3L_17_19040001	chr3L_19040001	0.94	RAL-441
295	chr3L	19093305	19093414	pogo	2092	5	8	109	'5-3	64.38	4.5	1.5	exon	MESR6 +	chr3L_8_19090001	chr3L_19090001	0.62	RAL-441
296	chr3L	19102359	19102475	Tabor	2	7324	23	116	'12-11	65.27	7.0	2.9	intergenic	not near genes	chr3L_23_19100001	chr3L_19100001	0.52	RAL-441
297	chr3L	19375451	19375499	F-element	313	290	10	48	'6-4	61.55	7.0	1.2	intron	CG32206 -	chr3L_10_19375001	chr3L_19375001	0.60	RAL-441
298	chr3L	19409823	19409869	F-element	201	153	8	46	'4-4	66.79	1.9	2.8	intron	CG32206 -	chr3L_8_19405001	chr3L_19405001	0.50	RAL-441
299	chr3L	19429896	19429984	BS	4994	5077	20	88	'12-8	65.41	5.3	3.2	intergenic	not near genes	chr3L_20_19425001	chr3L_19425001	0.60	RAL-441
300	chr3L	19454731	19454847	Burdock	248	6135	14	116	'3-11	68.78	5.6	2.1	intergenic	CR45434 +	chr3L_14_19450001	chr3L_19450001	0.21	RAL-441
301	chr3L	19788100	19788196	FB	4	15	26	96	'15-11	63.72	7.0	3.2	intron,intron	CG42637 -,Gyc76C -	chr3L_26_19785001	chr3L_19785001	0.58	RAL-441
302	chr3L	19888896	19889009	diver	5	222	22	113	'8-14	65.90	4.3	4.2	intron	Mi-2 -	chr3L_22_19885001	chr3L_19885001	0.36	RAL-441
303	chr3L	19951175	19951275	Ivk	1	5371	10	100	'6-4	64.45	4.9	1.7	intron	Ac76E +	chr3L_10_19950001	chr3L_19950001	0.60	RAL-441
304	chr3L	20006876	20006980	hopper	11	1411	30	104	'12-18	66.69	6.7	3.9	intron	kug +	chr3L_30_20005001	chr3L_20005001	0.40	RAL-441
305	chr3L	20187382	20187413	FB	486	855	4	31	'1-3	65.39	15.1	0.2	intron	CG42674 -	chr3L_4_20185001	chr3L_20185001	0.25	RAL-441
306	chr3L	20224144	20224221	Chimpo	168	25	7	77	'5-2	62.53	3.2	1.7	intron	CG17147 +	chr3L_7_20220001	chr3L_20220001	0.71	RAL-441
307	chr3L	20272015	20272107	pogo	2091	14	11	92	'8-3	66.83	4.3	2.1	intron	gogo -	chr3L_11_20270001	chr3L_20270001	0.73	RAL-441
308	chr3L	20430588	20430702	HMS-Beagle	246	6804	20	114	'6-14	66.87	6.0	2.9	intergenic	Las -,CG5262 -	chr3L_20_20430001	chr3L_20430001	0.30	RAL-441
309	chr3L	20490705	20490745	FB	49	9	5	40	'4-1	70.67	2.7	1.4	intron	ZnT77C -	chr3L_5_20490001	chr3L_20490001	0.80	RAL-441
310	chr3L	20764515	20764638	roo	8663	410	24	123	'14-10	67.79	3.0	6.0	intergenic	not near genes	chr3L_24_20760001	chr3L_20760001	0.58	RAL-441
311	chr3L	21035561	21035664	FB	7	5	25	103	'13-12	64.11	2.0	8.3	intron	siz +	chr3L_25_21035001	chr3L_21035001	0.52	RAL-441
312	chr3L	21175679	21175793	P-element	2885	2	25	114	'20-5	49.29	5.8	3.7	intron	chb +	chr3L_25_21175001	chr3L_21175001	0.80	RAL-441
313	chr3L	21251507	21251603	roo	9070	22	20	96	'9-11	67.10	3.7	4.3	intron	Eip78C +	chr3L_20_21250001	chr3L_21250001	0.45	RAL-441
314	chr3L	21695989	21696094	1360	5	1	31	105	'12-19	64.40	7.6	3.6	intron	CG32447 -	chr3L_31_21695001	chr3L_21695001	0.39	RAL-441
315	chr3L	21864786	21864884	pogo	2089	10	20	98	'8-12	65.44	5.0	3.3	intron	mub +	chr3L_20_21860001	chr3L_21860001	0.40	RAL-441
316	chr3L	22308495	22308526	F-element	62	26	11	31	'6-5	63.52	7.0	1.4	intron	Ten-m -	chr3L_11_22305001	chr3L_22305001	0.55	RAL-441
317	chr3L	22650815	22650907	412	19	7536	30	92	'8-22	61.37	6.4	4.1	intergenic	not near genes	chr3L_30_22650001	chr3L_22650001	0.27	RAL-441
318	chr3L	22749388	22749474	P-element	2879	3	20	86	'11-9	55.25	6.3	2.7	intergenic	SPoCk +	chr3L_20_22745001	chr3L_22745001	0.55	RAL-441
319	chr3L	22848558	22848662	INE-1	541	541	4	104	'3-1	71.05	4.2	0.8	intergenic	not near genes	chr3L_4_22845001	chr3L_22845001	0.75	RAL-441
320	chr3L	22909377	22909429	Tirant	401	8456	18	52	'4-14	64.49	8.4	1.9	5` UTR	CR45661 +	chr3L_18_22905001	chr3L_22905001	0.22	RAL-441
321	chr3L	23146476	23146511	1360	15	50	9	35	'3-6	67.69	10.2	0.8	intergenic	not near genes	chr3L_9_23145001	chr3L_23145001	0.33	RAL-441
322	chr3L	23205940	23205967	S-element	35	1706	8	27	'6-2	64.46	2.3	2.4	intergenic	not near genes	chr3L_8_23205001	chr3L_23205001	0.75	RAL-441
323	chr3L	23219219	23219321	1360	8	3382	34	102	'17-17	66.53	6.2	4.7	intron	nAChRalpha4 +	chr3L_34_23215001	chr3L_23215001	0.50	RAL-441
324	chr3L	23839692	23839719	McClintock	39	12	7	27	'5-2	65.40	4.2	1.3	intergenic	CG40470 -	chr3L_7_23835001	chr3L_23835001	0.71	RAL-441
325	chr3L	24213769	24213797	invader2	232	5062	7	28	'3-4	62.57	3.4	1.6	intron	Snap25 +	chr3L_7_24210001	chr3L_24210001	0.43	RAL-441
326	chr3L	24348209	24348290	roo	8683	9051	5	81	'3-2	63.91	2.0	1.7	intron	nvd +	chr3L_5_24345001	chr3L_24345001	0.60	RAL-441
327	chr3L	25162573	25162666	1360	17	6	5	93	'3-2	56.75	9.0	0.5	intergenic	not near genes	chr3L_5_25160001	chr3L_25160001	0.60	RAL-441
328	chr3L	25232767	25232867	accord2	184	7440	6	100	'2-4	61.33	7.6	0.7	intergenic	not near genes	chr3L_6_25230001	chr3L_25230001	0.33	RAL-441
329	chr3L	26178519	26178610	pogo	27	2095	12	91	'4-8	71.16	2.5	3.4	intergenic	not near genes	chr3L_12_26175001	chr3L_26175001	0.33	RAL-441
330	chr3L	27091914	27091995	pogo	2082	20	9	81	'1-8	60.35	5.7	1.3	3` UTR	CR45177 -	chr3L_9_27090001	chr3L_27090001	0.11	RAL-441
331	chr3L	27356076	27356108	Tc3	1693	1676	8	32	'6-2	70.32	4.5	1.5	intron	Dbp80 +	chr3L_8_27355001	chr3L_27355001	0.75	RAL-441
332	chr3L	27415220	27415317	transib2	2808	8	18	97	'8-10	59.99	5.4	2.8	intron	Dbp80 +	chr3L_18_27415001	chr3L_27415001	0.44	RAL-441
333	chr3R	444910	444949	1360	3283	3324	4	39	'1-3	73.13	12.0	0.3	intergenic	not near genes	chr3R_4_440001	chr3R_440001	0.25	RAL-441
334	chr3R	723159	723199	gypsy6	7485	59	6	40	'3-3	60.30	2.7	1.6	intergenic	not near genes	chr3R_6_720001	chr3R_720001	0.50	RAL-441
335	chr3R	1047949	1048057	Stalker2	401	11	13	108	'5-8	62.69	0.6	8.1	intron	CG15831 +	chr3R_13_1045001	chr3R_1045001	0.38	RAL-441
336	chr3R	1439425	1439538	1360	2	3386	16	113	'5-11	68.51	4.2	3.1	intron	CG40155 +	chr3R_16_1435001	chr3R_1435001	0.31	RAL-441
337	chr3R	2239344	2239378	HMS-Beagle	255	7026	7	34	'3-4	60.33	0.0	7.0	intergenic	not near genes	chr3R_7_2235001	chr3R_2235001	0.43	RAL-441
338	chr3R	2999744	2999849	McClintock	472	10	12	105	'6-6	64.38	3.3	2.8	intron	CG42618 -	chr3R_12_2995001	chr3R_2995001	0.50	RAL-441
339	chr3R	4420514	4420619	blood	371	9	17	105	'12-5	63.74	5.8	2.5	intergenic	not near genes	chr3R_17_4420001	chr3R_4420001	0.71	RAL-441
340	chr3R	4549214	4549328	1731	311	4313	13	114	'3-10	63.61	3.5	2.9	intron	CG34357 -	chr3R_13_4545001	chr3R_4545001	0.23	RAL-441
341	chr3R	4553275	4553404	Juan	48	17	10	129	'7-3	64.26	3.1	2.4	intron	CG34357 -	chr3R_10_4550001	chr3R_4550001	0.70	RAL-441
342	chr3R	4554285	4554405	Bari1	1707	4	21	120	'10-11	67.69	4.9	3.6	intron	CG34357 -	chr3R_21_4550001	chr3R_4550001	0.48	RAL-441
343	chr3R	4567952	4568046	pogo	2091	20	18	94	'8-10	61.47	3.7	3.8	intergenic	not near genes	chr3R_18_4565001	chr3R_4565001	0.44	RAL-441
344	chr3R	4600231	4600346	roo	404	8665	13	115	'4-9	69.26	2.3	3.9	intergenic	CR44317 -	chr3R_13_4600001	chr3R_4600001	0.31	RAL-441
345	chr3R	4732863	4732972	S-element	6	1707	15	109	'9-6	66.35	4.0	3.0	intergenic	not near genes	chr3R_15_4730001	chr3R_4730001	0.60	RAL-441
346	chr3R	4811864	4811975	P-element	2	3	9	111	'3-6	63.64	8.6	0.9	intron,intron,5` UTR	ctrip -,Hus1-like -,CG1129 +	chr3R_9_4810001	chr3R_4810001	0.33	RAL-441
347	chr3R	4885312	4885424	1360	3387	3387	21	112	'17-4	75.88	6.2	2.9	intergenic	not near genes	chr3R_21_4885001	chr3R_4885001	0.81	RAL-441
348	chr3R	4913604	4913656	1360	24	1	13	52	'5-8	68.23	8.1	1.4	intron	Cdep +	chr3R_13_4910001	chr3R_4910001	0.38	RAL-441
349	chr3R	5691011	5691169	Juan	4165	10	17	158	'11-6	61.74	8.0	1.9	intron,3` UTR	plx +,CG2104 -	chr3R_17_5690001	chr3R_5690001	0.65	RAL-441
350	chr3R	5693890	5693970	297	37	6972	15	80	'3-12	70.05	6.3	2.1	intron	plx +	chr3R_15_5690001	chr3R_5690001	0.20	RAL-441
351	chr3R	5773344	5773451	mdg1	7038	407	18	107	'9-9	63.69	4.8	3.1	intron	CG2082 -	chr3R_18_5770001	chr3R_5770001	0.50	RAL-441
352	chr3R	5896735	5896852	Quasimodo	7364	2	13	117	'8-5	73.64	5.0	2.2	intron	CG34113 -	chr3R_13_5895001	chr3R_5895001	0.62	RAL-441
353	chr3R	5920957	5921063	Tabor	480	9	13	106	'5-8	63.48	4.6	2.3	intron	CG34113 -	chr3R_13_5920001	chr3R_5920001	0.38	RAL-441
354	chr3R	7134402	7134488	I-element	20	5347	10	86	'4-6	65.25	3.3	2.3	intergenic	not near genes	chr3R_10_7130001	chr3R_7130001	0.40	RAL-441
355	chr3R	7477450	7477489	BS	5042	5003	9	39	'4-5	59.53	5.5	1.4	intergenic	not near genes	chr3R_9_7475001	chr3R_7475001	0.44	RAL-441
356	chr3R	8078766	8078877	roo	8666	401	25	111	'15-10	67.43	5.0	4.2	intron	mAChR-B +	chr3R_25_8075001	chr3R_8075001	0.60	RAL-441
357	chr3R	8199205	8199296	roo	392	6	14	91	'4-10	69.37	5.0	2.3	intergenic	not near genes	chr3R_14_8195001	chr3R_8195001	0.29	RAL-441
358	chr3R	8451715	8451757	X-element	4683	4710	8	42	'4-4	63.60	3.5	1.8	intron	CG45263 -	chr3R_8_8450001	chr3R_8450001	0.50	RAL-441
359	chr3R	8621732	8621757	jockey	30	11	5	25	'4-1	55.54	6.7	0.6	intron	5-HT2B +	chr3R_5_8620001	chr3R_8620001	0.80	RAL-441
360	chr3R	8784976	8785094	opus	498	4	18	118	'10-8	65.76	6.1	2.5	intron,intron	Pif1A -,Pif1B -	chr3R_18_8780001	chr3R_8780001	0.56	RAL-441
361	chr3R	9034220	9034328	1360	3381	3387	25	108	'16-9	66.15	5.9	3.6	intron	neur -	chr3R_25_9030001	chr3R_9030001	0.64	RAL-441
362	chr3R	9224657	9224750	FB	8	5	17	93	'8-9	60.65	7.0	2.1	intron	pum -	chr3R_17_9220001	chr3R_9220001	0.47	RAL-441
363	chr3R	9229530	9229632	P-element	2878	6	20	102	'15-5	49.60	7.9	2.2	intron,5` UTR	pum -,CR45196 +	chr3R_20_9225001	chr3R_9225001	0.75	RAL-441
364	chr3R	9278789	9278816	Rt1b	5122	5104	6	27	'3-3	67.63	8.4	0.6	intergenic	not near genes	chr3R_6_9275001	chr3R_9275001	0.50	RAL-441
365	chr3R	9284039	9284070	Rt1b	363	346	5	31	'2-3	65.85	4.6	0.9	intergenic	not near genes	chr3R_5_9280001	chr3R_9280001	0.40	RAL-441
366	chr3R	9298554	9298661	roo	8663	397	24	107	'11-13	68.97	5.1	3.9	intron	CG8861 -	chr3R_24_9295001	chr3R_9295001	0.46	RAL-441
367	chr3R	9301705	9301745	hobo	2928	33	7	40	'5-2	63.90	6.0	1.0	intron	CG8861 -	chr3R_7_9300001	chr3R_9300001	0.71	RAL-441
368	chr3R	9457000	9457093	P-element	1	2872	24	93	'12-12	42.39	8.0	2.7	3` UTR	GstZ2 -	chr3R_24_9455001	chr3R_9455001	0.50	RAL-441
369	chr3R	9907781	9907879	roo	409	22	22	98	'16-6	65.68	6.0	3.1	intron	Glut4EF +	chr3R_22_9905001	chr3R_9905001	0.73	RAL-441
370	chr3R	10030747	10030794	BS	5058	5011	10	47	'4-6	66.69	5.4	1.6	intron	Mical -	chr3R_10_10030001	chr3R_10030001	0.40	RAL-441
371	chr3R	10727349	10727467	Burdock	6136	6390	35	118	'14-21	69.52	6.7	4.5	intergenic	not near genes	chr3R_35_10725001	chr3R_10725001	0.40	RAL-441
372	chr3R	10920657	10920682	hobo	2931	2933	6	25	'1-5	62.08	5.1	1.0	intergenic	not near genes	chr3R_6_10920001	chr3R_10920001	0.17	RAL-441
373	chr3R	11076149	11076238	roo	401	19	17	89	'12-5	65.33	6.1	2.4	intergenic	not near genes	chr3R_17_11075001	chr3R_11075001	0.71	RAL-441
374	chr3R	11186549	11186577	BS	5073	5044	7	28	'3-4	60.94	7.5	0.8	intergenic	not near genes	chr3R_7_11185001	chr3R_11185001	0.43	RAL-441
375	chr3R	11481830	11481867	BS	1	39	9	37	'1-8	69.90	8.6	0.9	intergenic	not near genes	chr3R_9_11480001	chr3R_11480001	0.11	RAL-441
376	chr3R	11495987	11496047	hopper	15	1393	7	60	'3-4	61.96	2.7	1.9	intergenic	not near genes	chr3R_7_11495001	chr3R_11495001	0.43	RAL-441
377	chr3R	11569182	11569278	P-element	2875	2885	13	96	'8-5	49.14	7.2	1.6	intergenic	Mrp4 +	chr3R_13_11565001	chr3R_11565001	0.62	RAL-441
378	chr3R	11647449	11647572	opus	7115	498	15	123	'4-11	65.87	5.2	2.4	intron	Csk -	chr3R_15_11645001	chr3R_11645001	0.27	RAL-441
379	chr3R	11663538	11663647	flea	4758	5005	17	109	'12-5	66.08	4.8	2.9	intron	CG42327 +	chr3R_17_11660001	chr3R_11660001	0.71	RAL-441
380	chr3R	11695524	11695640	412	492	3	32	116	'15-17	66.46	6.7	4.2	intergenic	not near genes	chr3R_32_11695001	chr3R_11695001	0.47	RAL-441
381	chr3R	11911220	11911325	S-element	1704	1710	13	105	'5-8	68.20	3.3	3.0	intron	Cad87A -	chr3R_13_11910001	chr3R_11910001	0.38	RAL-441
382	chr3R	11982701	11982783	P-element	25	2877	5	82	'1-4	49.32	6.0	0.7	intergenic	CG12224 -,CG3397 -	chr3R_5_11980001	chr3R_11980001	0.20	RAL-441
383	chr3R	12451444	12451540	mdg1	399	7038	11	96	'6-5	65.50	3.5	2.4	intron	CG18549 +	chr3R_11_12450001	chr3R_12450001	0.55	RAL-441
384	chr3R	12539565	12539673	roo	408	8676	24	108	'13-11	67.81	5.2	3.9	intron	Octbeta3R -	chr3R_24_12535001	chr3R_12535001	0.54	RAL-441
385	chr3R	12738932	12739018	roo	406	8694	6	86	'5-1	64.00	3.0	1.5	intergenic	not near genes	chr3R_6_12735001	chr3R_12735001	0.83	RAL-441
386	chr3R	12795013	12795116	mdg1	419	16	16	103	'12-4	62.51	4.2	3.1	intergenic	not near genes	chr3R_16_12795001	chr3R_12795001	0.75	RAL-441
387	chr3R	13178502	13178544	F-element	14	55	13	42	'7-6	63.15	9.6	1.2	intergenic	not near genes	chr3R_13_13175001	chr3R_13175001	0.54	RAL-441
388	chr3R	13183265	13183304	jockey	4704	4667	4	39	'3-1	74.60	0.0	4.0	intergenic	not near genes	chr3R_4_13180001	chr3R_13180001	0.75	RAL-441
389	chr3R	13543837	13544026	1360	3388	6	14	189	'7-7	57.89	2.7	3.8	intergenic	CG31337 -	chr3R_14_13540001	chr3R_13540001	0.50	RAL-441
390	chr3R	13612886	13613003	copia	4874	258	28	117	'14-14	64.42	7.7	3.2	intergenic	CG9757 -	chr3R_28_13610001	chr3R_13610001	0.50	RAL-441
391	chr3R	13625003	13625122	hobo	2709	1	25	119	'9-16	65.10	5.4	3.9	intergenic	not near genes	chr3R_25_13625001	chr3R_13625001	0.36	RAL-441
392	chr3R	13851389	13851489	pogo	2	2081	15	100	'12-3	67.64	3.2	3.6	intergenic	not near genes	chr3R_15_13850001	chr3R_13850001	0.80	RAL-441
393	chr3R	13983476	13983587	P-element	2	2883	21	111	'12-9	50.53	6.0	3.0	intron	rdx -	chr3R_21_13980001	chr3R_13980001	0.57	RAL-441
394	chr3R	14014107	14014155	1360	39	4	12	48	'9-3	70.11	6.7	1.6	intron	rdx -	chr3R_12_14010001	chr3R_14010001	0.75	RAL-441
395	chr3R	14690787	14690894	opus	1	7497	8	107	'5-3	67.60	3.9	1.6	intron	Meltrin -	chr3R_8_14690001	chr3R_14690001	0.62	RAL-441
396	chr3R	14741516	14741601	P-element	27	2	13	85	'11-2	41.23	5.6	2.0	intergenic	jvl +,eff -	chr3R_13_14740001	chr3R_14740001	0.85	RAL-441
397	chr3R	14823105	14823149	jockey	56	12	15	44	'4-11	59.44	5.4	2.3	intron	btsz -	chr3R_15_14820001	chr3R_14820001	0.27	RAL-441
398	chr3R	14993547	14993660	diver	218	3	20	113	'10-10	59.19	5.2	3.2	intergenic	not near genes	chr3R_20_14990001	chr3R_14990001	0.50	RAL-441
399	chr3R	15157577	15157695	invader3	5191	279	29	118	'14-15	68.82	6.2	4.0	intron	Gyc88E +	chr3R_29_15155001	chr3R_15155001	0.48	RAL-441
400	chr3R	15367035	15367145	3S18	6097	5765	23	110	'10-13	63.85	4.1	4.5	intron	CG34404 -	chr3R_23_15365001	chr3R_15365001	0.43	RAL-441
401	chr3R	15754657	15754690	jockey	4770	4797	7	33	'3-4	53.71	7.5	0.8	intergenic	not near genes	chr3R_7_15750001	chr3R_15750001	0.43	RAL-441
402	chr3R	16028310	16028399	Max-element	291	19	22	89	'13-9	61.63	3.7	4.7	intron	pnr +	chr3R_22_16025001	chr3R_16025001	0.59	RAL-441
403	chr3R	16374679	16374776	roo	8670	396	18	97	'11-7	67.70	4.1	3.5	3` UTR	ss -	chr3R_18_16370001	chr3R_16370001	0.61	RAL-441
404	chr3R	17414423	17414540	Stalker2	7245	398	20	117	'14-6	68.08	4.6	3.6	3` UTR	CG42822 +	chr3R_20_17410001	chr3R_17410001	0.70	RAL-441
405	chr3R	17585824	17585932	roo	407	8675	17	108	'7-10	64.01	3.8	3.5	intergenic	not near genes	chr3R_17_17585001	chr3R_17585001	0.41	RAL-441
406	chr3R	17667070	17667180	1360	5	2	23	110	'10-13	64.94	6.1	3.2	intron	CG14322 +	chr3R_23_17665001	chr3R_17665001	0.43	RAL-441
407	chr3R	17733240	17733285	INE-1	561	541	8	45	'3-5	74.27	2.2	2.5	intergenic	Lgr1 +,CG14321 +	chr3R_8_17730001	chr3R_17730001	0.38	RAL-441
408	chr3R	18570300	18570406	297	388	6588	9	106	'8-1	66.03	4.0	1.8	intergenic	not near genes	chr3R_9_18570001	chr3R_18570001	0.89	RAL-441
409	chr3R	18740054	18740140	P-element	2875	10	13	86	'7-6	47.82	5.1	2.1	intron	Mekk1 -	chr3R_13_18740001	chr3R_18740001	0.54	RAL-441
410	chr3R	19139374	19139485	opus	112	489	7	111	'1-6	64.97	8.6	0.7	3` UTR	Ppcs -	chr3R_7_19135001	chr3R_19135001	0.14	RAL-441
411	chr3R	19207987	19208047	Tirant	8118	8486	5	60	'3-2	66.97	8.2	0.5	intergenic	not near genes	chr3R_5_19205001	chr3R_19205001	0.60	RAL-441
412	chr3R	19224735	19224794	FB	12	46	11	59	'7-4	69.50	5.3	1.7	intron	vib -	chr3R_11_19220001	chr3R_19220001	0.64	RAL-441
413	chr3R	19275379	19275500	springer	7522	1	21	121	'14-7	67.16	4.2	4.0	intergenic	not near genes	chr3R_21_19275001	chr3R_19275001	0.67	RAL-441
414	chr3R	20198621	20198678	Ivk	7	5332	11	57	'7-4	65.51	6.7	1.4	intergenic	not near genes	chr3R_11_20195001	chr3R_20195001	0.64	RAL-441
415	chr3R	21612842	21612955	hobo	2	2937	19	113	'12-7	66.99	5.0	3.2	intron	InR -	chr3R_19_21610001	chr3R_21610001	0.63	RAL-441
416	chr3R	22000593	22000648	jockey	24	4944	7	55	'4-3	59.78	5.4	1.1	intron	Eip93F +	chr3R_7_22000001	chr3R_22000001	0.57	RAL-441
417	chr3R	22092703	22092812	297	8	6973	12	109	'7-5	62.56	5.3	1.9	intron	CG5778 -	chr3R_12_22090001	chr3R_22090001	0.58	RAL-441
418	chr3R	22757968	22758081	roo	8664	403	27	113	'12-15	69.20	5.9	3.9	intron,intron	CG7029 +,Usp12-46 +	chr3R_27_22755001	chr3R_22755001	0.44	RAL-441
419	chr3R	23409543	23409627	diver	217	5909	15	84	'9-6	65.84	5.1	2.5	3` UTR	CG4374 -	chr3R_15_23405001	chr3R_23405001	0.60	RAL-441
420	chr3R	23526259	23526296	F-element	176	216	9	37	'5-4	56.29	12.3	0.7	intron	CG10175 -	chr3R_9_23525001	chr3R_23525001	0.56	RAL-441
421	chr3R	24062991	24063105	pogo	2098	4	15	114	'11-4	64.34	3.2	3.6	intergenic	4EHP -,SMC1 +	chr3R_15_24060001	chr3R_24060001	0.73	RAL-441
422	chr3R	24891329	24891434	412	11	489	28	105	'13-15	64.94	5.5	4.3	intron	CG31121 -	chr3R_28_24890001	chr3R_24890001	0.46	RAL-441
423	chr3R	25541794	25541913	pogo	4	2100	18	119	'12-6	69.74	4.5	3.3	intron	msi +	chr3R_18_25540001	chr3R_25540001	0.67	RAL-441
424	chr3R	25712369	25712477	412	12	7545	15	108	'4-11	63.51	5.9	2.2	intron	LpR2 -	chr3R_15_25710001	chr3R_25710001	0.27	RAL-441
425	chr3R	25877160	25877272	Bari1	6	1702	24	112	'13-11	65.22	5.8	3.5	intron	Tsp96F -	chr3R_24_25875001	chr3R_25875001	0.54	RAL-441
426	chr3R	25881526	25881619	1360	3386	3373	23	93	'13-10	65.19	5.7	3.4	intergenic	Tsp96F -,SppL +	chr3R_23_25880001	chr3R_25880001	0.57	RAL-441
427	chr3R	25896179	25896290	412	488	4	16	111	'9-7	66.65	4.3	3.0	intron	CG5948 +	chr3R_16_25895001	chr3R_25895001	0.56	RAL-441
428	chr3R	25898807	25898851	F-element	42	10	6	44	'1-5	57.49	5.1	1.0	exon	MCO3 +	chr3R_6_25895001	chr3R_25895001	0.17	RAL-441
429	chr3R	26314888	26314982	I-element	5	5338	12	94	'6-6	57.88	5.7	1.8	intergenic	not near genes	chr3R_12_26310001	chr3R_26310001	0.50	RAL-441
430	chr3R	26736460	26736498	F-element	110	107	10	38	'7-3	60.52	10.3	0.9	intergenic	CG6403 -	chr3R_10_26735001	chr3R_26735001	0.70	RAL-441
431	chr3R	26755649	26755738	roo	8670	405	10	89	'6-4	69.07	1.9	3.4	intergenic	not near genes	chr3R_10_26755001	chr3R_26755001	0.60	RAL-441
432	chr3R	26827000	26827078	mdg1	7459	7081	10	78	'5-5	68.10	4.3	1.9	intron	Tl +	chr3R_10_26825001	chr3R_26825001	0.50	RAL-441
433	chr3R	26854847	26854960	412	11	496	17	113	'9-8	68.69	6.4	2.3	intron	Lerp -	chr3R_17_26850001	chr3R_26850001	0.53	RAL-441
434	chr3R	27082798	27082850	jockey	4762	4782	13	52	'4-9	62.05	3.8	2.7	3` UTR	CG14257 +	chr3R_13_27080001	chr3R_27080001	0.31	RAL-441
435	chr3R	27300618	27300711	hopper	6	1393	18	93	'6-12	67.69	2.9	4.6	intron	CG3339 -	chr3R_18_27300001	chr3R_27300001	0.33	RAL-441
436	chr3R	27452738	27452836	297	6600	389	16	98	'5-11	65.01	4.4	3.0	intergenic	not near genes	chr3R_16_27450001	chr3R_27450001	0.31	RAL-441
437	chr3R	27763438	27763532	blood	7380	7020	20	94	'7-13	64.79	3.4	4.5	intergenic	not near genes	chr3R_20_27760001	chr3R_27760001	0.35	RAL-441
438	chr3R	27974659	27974710	jockey	4674	4705	10	51	'3-7	70.17	6.2	1.4	intron	betaTub97EF -	chr3R_10_27970001	chr3R_27970001	0.30	RAL-441
439	chr3R	28444912	28445021	roo	8661	394	18	109	'11-7	65.06	3.6	3.9	intron	beat-VI +	chr3R_18_28440001	chr3R_28440001	0.61	RAL-441
440	chr3R	29200069	29200174	S-element	3	1702	6	105	'4-2	63.99	3.4	1.4	intergenic	CG11899 +	chr3R_6_29200001	chr3R_29200001	0.67	RAL-441
441	chr3R	29288727	29288754	BS	5042	5033	8	27	'2-6	67.95	0.8	4.4	intergenic	not near genes	chr3R_8_29285001	chr3R_29285001	0.25	RAL-441
442	chr3R	29421487	29421534	jockey	4671	4683	9	47	'5-4	62.22	1.6	3.5	intron	Ptp99A +	chr3R_9_29420001	chr3R_29420001	0.56	RAL-441
443	chr3R	29430838	29430938	hobo	1	2933	11	100	'9-2	67.44	3.2	2.6	intron	Ptp99A +	chr3R_11_29430001	chr3R_29430001	0.82	RAL-441
444	chr3R	29611186	29611281	roo	8668	411	13	95	'11-2	61.36	3.5	2.9	intron	alph +	chr3R_13_29610001	chr3R_29610001	0.85	RAL-441
445	chr3R	29764283	29764385	P-element	2884	2882	15	102	'9-6	51.28	5.8	2.2	intergenic	not near genes	chr3R_15_29760001	chr3R_29760001	0.60	RAL-441
446	chr3R	30803804	30803911	FB	6	4	19	107	'10-9	64.35	4.5	3.5	intron	wts -	chr3R_19_30800001	chr3R_30800001	0.53	RAL-441
447	chr3R	30835330	30835450	roo	8664	411	18	120	'8-10	66.30	5.2	2.9	intron	CG15544 +	chr3R_18_30835001	chr3R_30835001	0.44	RAL-441
448	chr3R	31423806	31423837	pogo	2	32	8	31	'3-5	63.76	10.6	0.7	intron	Gprk2 +	chr3R_8_31420001	chr3R_31420001	0.38	RAL-441
449	chr3R	31926682	31926715	jockey	26	61	5	33	'4-1	55.42	10.5	0.4	intron	heph -	chr3R_5_31925001	chr3R_31925001	0.80	RAL-441
450	chr3R	31965159	31965272	1360	3387	3385	18	113	'8-10	63.92	6.6	2.4	intron	heph -	chr3R_18_31965001	chr3R_31965001	0.44	RAL-441
451	chr4	490221	490590	pogo	6	16	28	369	'12-16	63.39	4.0	5.6	intergenic	not near genes	chr4_28_490001	chr4_490001	0.43	RAL-441
452	chr4	979781	979902	opus	113	497	19	121	'9-10	69.85	4.4	3.5	intergenic	not near genes	chr4_19_975001	chr4_975001	0.47	RAL-441
453	chr4	1223791	1223877	HMS-Beagle	7028	22	9	86	'3-6	63.86	1.6	3.5	3` UTR	Mitf +	chr4_9_1220001	chr4_1220001	0.33	RAL-441
454	chrX	683532	683615	jockey	4990	4686	16	83	'10-6	61.63	4.8	2.8	intergenic	not near genes	chrX_16_680001	chrX_680001	0.62	RAL-441
455	chrX	1126551	1126653	roo	399	7	17	102	'9-8	64.65	2.6	4.7	intron	CG3655 -	chrX_17_1125001	chrX_1125001	0.53	RAL-441
456	chrX	1701828	1701928	mdg3	5259	5486	15	100	'9-6	65.28	5.9	2.2	intergenic	not near genes	chrX_15_1700001	chrX_1700001	0.60	RAL-441
457	chrX	1823997	1824050	mdg3	5270	206	7	53	'4-3	65.94	6.5	0.9	intron	CG42666 +	chrX_7_1820001	chrX_1820001	0.57	RAL-441
458	chrX	1976075	1976135	P-element	2875	27	14	60	'6-8	39.84	2.5	4.0	intron	Hr4 +	chrX_14_1975001	chrX_1975001	0.43	RAL-441
459	chrX	2289081	2289196	Tirant	8111	394	24	115	'5-19	64.83	3.9	4.9	intron	CG2865 -	chrX_24_2285001	chrX_2285001	0.21	RAL-441
460	chrX	2293802	2293908	HMS-Beagle	6802	239	14	106	'10-4	64.07	4.9	2.4	intergenic	CG2865 -	chrX_14_2290001	chrX_2290001	0.71	RAL-441
461	chrX	2507604	2507713	Burdock	11	6389	9	109	'7-2	65.35	3.9	1.8	intron	trol -	chrX_9_2505001	chrX_2505001	0.78	RAL-441
462	chrX	2745131	2745240	FB	4	4	20	109	'11-9	67.61	3.9	4.1	intron	kirre +	chrX_20_2745001	chrX_2745001	0.55	RAL-441
463	chrX	2918502	2918575	FB	15	17	15	73	'3-12	63.82	3.4	3.4	intron	kirre +	chrX_15_2915001	chrX_2915001	0.20	RAL-441
464	chrX	3650226	3650331	3S18	10	340	12	105	'9-3	65.91	2.8	3.2	intron	AstA-R1 +	chrX_12_3650001	chrX_3650001	0.75	RAL-441
465	chrX	3742139	3742248	297	6970	6582	21	109	'9-12	67.40	4.2	4.0	intron	tlk +	chrX_21_3740001	chrX_3740001	0.43	RAL-441
466	chrX	3743742	3743842	Tirant	404	8107	15	100	'11-4	67.98	4.2	2.9	intron	tlk +	chrX_15_3740001	chrX_3740001	0.73	RAL-441
467	chrX	3826782	3826879	Juan	4059	4205	16	97	'9-7	63.81	2.7	4.3	intron	ec +	chrX_16_3825001	chrX_3825001	0.56	RAL-441
468	chrX	4726062	4726164	HMS-Beagle	10	7032	21	102	'10-11	61.34	4.7	3.7	intron	Proc-R +	chrX_21_4725001	chrX_4725001	0.48	RAL-441
469	chrX	4827028	4827128	3S18	337	5782	12	100	'6-6	70.54	4.8	2.1	intergenic	CG12682 +	chrX_12_4825001	chrX_4825001	0.50	RAL-441
470	chrX	4864928	4865031	hobo	2928	3	17	103	'8-9	65.25	4.2	3.3	intron	CG42594 +	chrX_17_4860001	chrX_4860001	0.47	RAL-441
471	chrX	4930401	4930503	Tirant	4	8501	17	102	'9-8	64.37	3.5	3.8	intron	CG44774 -	chrX_17_4930001	chrX_4930001	0.53	RAL-441
472	chrX	4971775	4971890	HMS-Beagle	24	247	7	115	'6-1	58.72	3.2	1.7	intron	CR44833 -	chrX_7_4970001	chrX_4970001	0.86	RAL-441
473	chrX	4975091	4975163	I-element	5331	3	9	72	'3-6	55.95	5.0	1.5	intron	CR44833 -	chrX_9_4975001	chrX_4975001	0.33	RAL-441
474	chrX	5115110	5115214	Burdock	6389	11	6	104	'1-5	62.38	2.2	1.9	intron,intron	CG15465 +,rg +	chrX_6_5115001	chrX_5115001	0.17	RAL-441
475	chrX	5179072	5179103	HMS-Beagle2	306	7158	6	31	'2-4	60.27	8.1	0.7	intron,intron	CG15465 +,rg +	chrX_6_5175001	chrX_5175001	0.33	RAL-441
476	chrX	5217242	5217274	jockey	4795	4767	5	32	'3-2	63.31	6.6	0.7	intron,intron	CG15465 +,rg +	chrX_5_5215001	chrX_5215001	0.60	RAL-441
477	chrX	5222777	5222886	hobo	4	2934	15	109	'11-4	63.64	5.2	2.4	intron,intron	CG15465 +,rg +	chrX_15_5220001	chrX_5220001	0.73	RAL-441
478	chrX	5242863	5242912	jockey	4699	4669	11	49	'5-6	65.31	6.1	1.5	intron,intron	CG15465 +,rg +	chrX_11_5240001	chrX_5240001	0.45	RAL-441
479	chrX	6154644	6154732	Transpac	311	4952	19	88	'9-10	70.95	7.7	2.2	intron	Ca-alpha1T -	chrX_19_6150001	chrX_6150001	0.47	RAL-441
480	chrX	6320435	6320512	mdg3	5459	5253	9	77	'2-7	63.35	3.8	1.9	intron	CG15894 +	chrX_9_6320001	chrX_6320001	0.22	RAL-441
481	chrX	6720364	6720443	297	392	6615	9	79	'7-2	64.77	3.9	1.8	intergenic	CG3168 -	chrX_9_6720001	chrX_6720001	0.78	RAL-441
482	chrX	6875506	6875607	P-element	2885	2874	24	101	'14-10	50.95	3.2	5.7	intron	CG43736 +	chrX_24_6875001	chrX_6875001	0.58	RAL-441
483	chrX	7448938	7449027	jockey	4974	4676	8	89	'3-5	63.87	3.9	1.6	5` UTR	CR45533 +	chrX_8_7445001	chrX_7445001	0.38	RAL-441
484	chrX	8038772	8038799	297	2	6592	6	27	'3-3	63.94	3.8	1.2	3` UTR	fs(1)h -	chrX_6_8035001	chrX_8035001	0.50	RAL-441
485	chrX	8670747	8670848	pogo	2084	7	11	101	'5-6	65.87	4.3	2.1	intergenic	not near genes	chrX_11_8670001	chrX_8670001	0.45	RAL-441
486	chrX	8867820	8867932	pogo	2100	3	17	112	'10-7	62.37	3.0	4.2	exon	CG12075 +	chrX_17_8865001	chrX_8865001	0.59	RAL-441
487	chrX	8978935	8979045	412	494	1	16	110	'11-5	63.79	4.3	3.0	intron,intron	rdgA +,CR43836 -	chrX_16_8975001	chrX_8975001	0.69	RAL-441
488	chrX	9618864	9618979	pogo	5	2098	21	115	'5-16	67.09	5.1	3.4	intron	CG42797 +	chrX_21_9615001	chrX_9615001	0.24	RAL-441
489	chrX	10147110	10147160	jockey	4808	4758	4	50	'3-1	69.38	3.1	1.0	intron,intron	RhoU +,CR44894 -	chrX_4_10145001	chrX_10145001	0.75	RAL-441
490	chrX	10559397	10559435	jockey	7	5	14	38	'5-9	68.13	5.9	2.0	intron	spri -	chrX_14_10555001	chrX_10555001	0.36	RAL-441
491	chrX	10595961	10596069	P-element	6	2	21	108	'14-7	47.41	5.8	3.1	intergenic	Hmr -,CG2124 +	chrX_21_10595001	chrX_10595001	0.67	RAL-441
492	chrX	10653583	10653630	hobo	16	3	10	47	'6-4	64.91	4.1	2.0	intron	X11Lbeta +	chrX_10_10650001	chrX_10650001	0.60	RAL-441
493	chrX	10682868	10682982	pogo	1	2092	17	114	'8-9	70.43	4.0	3.4	intron	X11Lbeta +	chrX_17_10680001	chrX_10680001	0.47	RAL-441
494	chrX	10893073	10893182	412	489	7	8	109	'5-3	64.34	4.3	1.5	intergenic	CR44524 +,CR45617 +	chrX_8_10890001	chrX_10890001	0.62	RAL-441
495	chrX	11782553	11782626	HMS-Beagle	46	7040	5	73	'3-2	74.65	8.5	0.5	intergenic	not near genes	chrX_5_11780001	chrX_11780001	0.60	RAL-441
496	chrX	12098721	12098751	copia	243	213	6	30	'4-2	60.92	4.3	1.1	intron,intron	CR43960 +,Ten-a +	chrX_6_12095001	chrX_12095001	0.67	RAL-441
497	chrX	12157982	12158098	412	494	6	23	116	'15-8	64.61	5.2	3.7	intron	Ten-a +	chrX_23_12155001	chrX_12155001	0.65	RAL-441
498	chrX	12546424	12546508	P-element	2870	17	19	84	'11-8	43.08	5.0	3.2	intron	CG43921 -	chrX_19_12545001	chrX_12545001	0.58	RAL-441
499	chrX	12780819	12780912	roo	385	8668	17	93	'6-11	65.95	3.4	3.9	intron	CG32647 -	chrX_17_12780001	chrX_12780001	0.35	RAL-441
500	chrX	13045303	13045399	Ivk	5374	5091	12	96	'7-5	64.75	1.9	4.1	intron	rad +	chrX_12_13045001	chrX_13045001	0.58	RAL-441
501	chrX	13226544	13226661	HMS-Beagle	245	6800	16	117	'9-7	66.05	3.7	3.4	intron	mew -	chrX_16_13225001	chrX_13225001	0.56	RAL-441
502	chrX	13561451	13561499	Stalker2	7598	401	14	48	'6-8	63.99	7.8	1.6	intergenic	CG32633 +	chrX_14_13560001	chrX_13560001	0.43	RAL-441
503	chrX	13573597	13573631	gypsy6	7419	34	8	34	'3-5	66.49	1.3	3.5	intron	Tango13 +	chrX_8_13570001	chrX_13570001	0.38	RAL-441
504	chrX	13981271	13981344	hobo	3	2922	8	73	'6-2	62.47	2.6	2.2	intron	mamo -	chrX_8_13980001	chrX_13980001	0.75	RAL-441
505	chrX	14234302	14234408	412	7544	13	8	106	'6-2	70.34	3.5	1.8	intergenic	Fbxl4 -,CG42271 -	chrX_8_14230001	chrX_14230001	0.75	RAL-441
506	chrX	15024352	15024425	P-element	10	9	11	73	'6-5	46.16	3.8	2.3	intron	hiw -	chrX_11_15020001	chrX_15020001	0.55	RAL-441
507	chrX	15226628	15226721	flea	250	23	7	93	'4-3	59.85	3.9	1.4	intergenic	CR44430 +	chrX_7_15225001	chrX_15225001	0.57	RAL-441
508	chrX	15435599	15435624	hobo	4	38	5	25	'2-3	66.30	4.8	0.9	intron	Cngl -	chrX_5_15435001	chrX_15435001	0.40	RAL-441
509	chrX	15823470	15823537	P-element	2858	15	5	67	'2-3	42.59	7.4	0.6	exon	sd +	chrX_5_15820001	chrX_15820001	0.40	RAL-441
510	chrX	16935895	16935934	BS	40	1	8	39	'4-4	63.84	2.1	2.6	intron	CG4928 +	chrX_8_16935001	chrX_16935001	0.50	RAL-441
511	chrX	17056093	17056204	opus	10	499	20	111	'6-14	68.05	4.0	4.0	intron	CG45002 -	chrX_20_17055001	chrX_17055001	0.30	RAL-441
512	chrX	17063250	17063356	297	1	6964	10	106	'6-4	70.33	2.9	2.6	intron	CG45002 -	chrX_10_17060001	chrX_17060001	0.60	RAL-441
513	chrX	17379237	17379345	Burdock	241	6136	18	108	'4-14	68.01	2.3	5.5	intergenic	CR43491 -	chrX_18_17375001	chrX_17375001	0.22	RAL-441
514	chrX	17521265	17521362	297	381	6591	5	97	'2-3	60.19	3.0	1.2	intron	CG43658 -	chrX_5_17520001	chrX_17520001	0.40	RAL-441
515	chrX	17751833	17751924	jockey	4992	23	10	91	'4-6	67.12	4.8	1.7	3` UTR	CG42684 +	chrX_10_17750001	chrX_17750001	0.40	RAL-441
516	chrX	17837944	17838055	S-element	1	1704	5	111	'3-2	65.38	5.2	0.8	intron	CG6398 +	chrX_5_17835001	chrX_17835001	0.60	RAL-441
517	chrX	18159328	18159358	jockey	205	175	5	30	'3-2	64.50	5.4	0.8	intron	Frq1 +	chrX_5_18155001	chrX_18155001	0.60	RAL-441
518	chrX	18171247	18171292	jockey	84	36	8	45	'5-3	63.74	6.7	1.0	3` UTR	Frq1 +	chrX_8_18170001	chrX_18170001	0.62	RAL-441
519	chrX	18193700	18193816	hopper	1414	1411	13	116	'8-5	68.14	4.0	2.6	intron	Frq2 +	chrX_13_18190001	chrX_18190001	0.62	RAL-441
520	chrX	18239053	18239093	jockey	4566	4559	8	40	'5-3	58.71	3.0	2.0	intergenic	not near genes	chrX_8_18235001	chrX_18235001	0.62	RAL-441
521	chrX	18487007	18487051	F-element	153	106	8	44	'4-4	64.54	4.8	1.4	intergenic	psh -,CG15046 -	chrX_8_18485001	chrX_18485001	0.50	RAL-441
522	chrX	18518241	18518283	412	7526	33	4	42	'3-1	67.11	2.6	1.1	intron,intron	Aats-his +,Bx +	chrX_4_18515001	chrX_18515001	0.75	RAL-441
523	chrX	19043684	19043729	F-element	56	14	7	45	'4-3	64.99	6.1	1.0	intergenic	not near genes	chrX_7_19040001	chrX_19040001	0.57	RAL-441
524	chrX	19134906	19135018	flea	256	4754	9	112	'8-1	65.66	3.4	2.0	intergenic	Obp18a -	chrX_9_19130001	chrX_19130001	0.89	RAL-441
525	chrX	19159950	19160042	S-element	1704	1700	8	92	'5-3	62.08	3.8	1.7	intron	RhoGAP18B -	chrX_8_19155001	chrX_19155001	0.62	RAL-441
526	chrX	19607812	19607928	S-element	5	1714	9	116	'4-5	65.15	2.9	2.3	intron	CG14207 +	chrX_9_19605001	chrX_19605001	0.44	RAL-441
527	chrX	19642787	19642867	P-element	2856	2883	12	80	'6-6	44.08	4.8	2.1	5` UTR	CG12237 -	chrX_12_19640001	chrX_19640001	0.50	RAL-441
528	chrX	19812409	19812522	roo	404	2	12	113	'8-4	71.60	3.8	2.5	intergenic	skpD +	chrX_12_19810001	chrX_19810001	0.67	RAL-441
529	chrX	19877777	19877809	roo	408	395	5	32	'3-2	65.48	4.5	0.9	intron	Hers +	chrX_5_19875001	chrX_19875001	0.60	RAL-441
530	chrX	19883725	19883823	roo	402	16	18	98	'11-7	67.01	5.2	2.9	intron	Hers +	chrX_18_19880001	chrX_19880001	0.61	RAL-441
531	chrX	19887059	19887164	P-element	2886	6	16	105	'10-6	54.77	5.2	2.6	intron,exon	Hers +,amn -	chrX_16_19885001	chrX_19885001	0.62	RAL-441
532	chrX	20013640	20013756	Tirant	403	8115	13	116	'8-5	69.46	3.8	2.7	intron	Dop2R -	chrX_13_20010001	chrX_20010001	0.62	RAL-441
533	chrX	20066119	20066153	297	2	2	7	34	'3-4	65.17	8.7	0.7	intergenic	not near genes	chrX_7_20065001	chrX_20065001	0.43	RAL-441
534	chrX	20277718	20277752	hopper	46	1403	4	34	'3-1	67.34	6.3	0.5	intergenic	not near genes	chrX_4_20275001	chrX_20275001	0.75	RAL-441
535	chrX	20452357	20452473	Transpac	311	4922	23	116	'13-10	66.39	5.2	3.7	intron	CG32506 +	chrX_23_20450001	chrX_20450001	0.57	RAL-441
536	chrX	21087561	21087675	mdg3	5252	5493	5	114	'4-1	69.87	1.0	2.5	intergenic	not near genes	chrX_5_21085001	chrX_21085001	0.80	RAL-441
537	chrX	21227291	21227342	roo	8663	50	8	51	'2-6	73.47	1.8	2.9	intron	CG32521 -	chrX_8_21225001	chrX_21225001	0.25	RAL-441
538	chrX	21399382	21399493	pogo	3	2097	21	111	'13-8	67.03	4.5	3.8	intergenic	not near genes	chrX_21_21395001	chrX_21395001	0.62	RAL-441
539	chrX	21631520	21631626	P-element	11	2886	6	106	'3-3	47.39	7.1	0.7	intergenic	CR44712 +	chrX_6_21630001	chrX_21630001	0.50	RAL-441
540	chrX	21638088	21638117	gtwin	37	8	4	29	'1-3	65.70	2.6	1.1	intergenic	not near genes	chrX_4_21635001	chrX_21635001	0.25	RAL-441
541	chrX	21667904	21667930	gypsy2	51	6513	4	26	'1-3	63.47	19.4	0.2	intergenic	not near genes	chrX_4_21665001	chrX_21665001	0.25	RAL-441
542	chrX	21668885	21668928	mdg1	386	7086	4	43	'3-1	70.20	4.3	0.8	intergenic	not near genes	chrX_4_21665001	chrX_21665001	0.75	RAL-441
543	chrX	22252769	22252864	297	6954	1	4	95	'2-2	70.32	2.7	1.1	intergenic	not near genes	chrX_4_22250001	chrX_22250001	0.50	RAL-441