SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 46340 46379 chr2L 46438 46476 4 94 7.0 12.5 9.8 0.4 136 chr2L 46340 intron Cda5 - chr2L 46408 intron Cda5 - chr2L 46476 intron Cda5 - chr2L_4_45001 chr2L_45001 RAL-426 2 chr2L 47453 47485 chr2L 52572 52608 jockey 12 5116 12.5 10.0 11.2 1.0 5155 chr2L 47453 intron Cda5 - chr2L 50030 intron Cda5 - chr2L 52608 intron Cda5 - chr2L_12_50001 chr2L_50001 RAL-426 3 chr2L 62026 62066 chr2L 62272 62309 5 247 29.0 26.0 27.5 0.2 283 chr2L 62026 intron Cda5 - chr2L 62168 intron Cda5 - chr2L 62309 intron Cda5 - chr2L_5_60001 chr2L_60001 RAL-426 4 chr2L 73780 73804 chr2L 73902 73933 5 124 19.5 13.5 16.5 0.3 153 chr2L 73780 3` UTR,intron CR44987 -,galectin + chr2L 73856 intron galectin + chr2L 73933 intron galectin + chr2L_5_70001 chr2L_70001 RAL-426 5 chr2L 79816 79859 chr2L 80180 80222 6 361 8.5 16.5 12.5 0.4 406 chr2L 79816 intergenic not near genes chr2L 80019 intergenic not near genes chr2L 80222 intergenic not near genes chr2L_6_80001 chr2L_80001 RAL-426 6 chr2L 262721 262766 chr2L 262813 262848 16 88 4.0 7.5 5.8 2.4 127 chr2L 262721 intron,3` UTR,5` UTR CG3645 -,CG17075 -,CR44219 + chr2L 262784 intron,3` UTR,5` UTR CG3645 -,CG17075 -,CR44219 + chr2L 262848 intron,3` UTR,5` UTR CG3645 -,CG17075 -,CR44219 + chr2L_16_260001 chr2L_260001 RAL-426 7 chr2L 263283 263319 chr2L 263449 263452 5 158 1.5 7.0 4.2 1.0 169 chr2L 263283 intron,3` UTR CG3645 -,CG17075 - chr2L 263368 intron,3` UTR CG3645 -,CG17075 - chr2L 263452 intron,3` UTR CG3645 -,CG17075 - chr2L_5_260001 chr2L_260001 RAL-426 8 chr2L 325122 325158 chr2L 325209 325217 5 79 4.5 7.0 5.8 0.7 95 chr2L 325122 intron Plc21C + chr2L 325170 intron Plc21C + chr2L 325217 intron Plc21C + chr2L_5_325001 chr2L_325001 RAL-426 9 chr2L 347868 347919 chr2L 355388 355408 blood 21 7510 3.0 4.0 3.5 4.7 7540 chr2L 347868 3` UTR Plc21C + chr2L 351638 intron Plc21C + chr2L 355408 3` UTR Plc21C + chr2L_21_350001 chr2L_350001 RAL-426 10 chr2L 407943 407968 chr2L 408029 408069 9 98 11.5 10.0 10.8 0.8 126 chr2L 407943 3` UTR RpI135 + chr2L 408006 intergenic AP-2alpha -,RpI135 + chr2L 408069 3` UTR AP-2alpha - chr2L_9_405001 chr2L_405001 RAL-426 11 chr2L 632722 632731 chr2L 632788 632831 4 82 6.0 4.5 5.2 0.6 109 chr2L 632722 intergenic not near genes chr2L 632776 intergenic not near genes chr2L 632831 intergenic not near genes chr2L_4_630001 chr2L_630001 RAL-426 12 chr2L 650929 650973 chr2L 651218 651256 4 284 14.0 12.0 13.0 0.3 327 chr2L 650929 intron ds - chr2L 651092 intron ds - chr2L 651256 intron ds - chr2L_4_650001 chr2L_650001 RAL-426 13 chr2L 686918 686934 chr2L 695978 695994 roo 6 9056 4.0 5.5 4.8 1.0 9076 chr2L 686918 intron ds - chr2L 691456 intron ds - chr2L 695994 intron ds - chr2L_6_690001 chr2L_690001 RAL-426 14 chr2L 741266 741300 chr2L 744786 744818 7 3519 22.0 16.5 19.2 0.3 3552 chr2L 741266 intron Eaat2 - chr2L 743042 intron Eaat2 - chr2L 744818 intergenic Eaat2 - chr2L_7_740001 chr2L_740001 RAL-426 15 chr2L 753798 753851 chr2L 753907 753960 5 106 7.0 8.0 7.5 0.6 162 chr2L 753798 intron GABA-B-R3 + chr2L 753879 intron GABA-B-R3 + chr2L 753960 intron GABA-B-R3 + chr2L_5_750001 chr2L_750001 RAL-426 16 chr2L 763576 763629 chr2L 763672 763709 9 88 3.0 2.0 2.5 2.6 133 chr2L 763576 intergenic not near genes chr2L 763642 intergenic not near genes chr2L 763709 intergenic not near genes chr2L_9_760001 chr2L_760001 RAL-426 17 chr2L 764558 764592 chr2L 764659 764676 7 96 14.5 10.5 12.5 0.5 118 chr2L 764558 intergenic not near genes chr2L 764617 intergenic not near genes chr2L 764676 intergenic not near genes chr2L_7_760001 chr2L_760001 RAL-426 18 chr2L 795902 795926 chr2L 796062 796087 8 159 9.0 5.5 7.2 1.0 185 chr2L 795902 intergenic not near genes chr2L 795994 intergenic not near genes chr2L 796087 intergenic not near genes chr2L_8_795001 chr2L_795001 RAL-426 19 chr2L 853305 853347 chr2L 853409 853453 4 105 13.0 8.0 10.5 0.3 148 chr2L 853305 intron kraken + chr2L 853379 intron kraken + chr2L 853453 intron kraken + chr2L_4_850001 chr2L_850001 RAL-426 20 chr2L 877826 877878 chr2L 877927 877967 6 99 10.5 12.0 11.2 0.5 141 chr2L 877826 3` UTR,exon CG15824 -,ninaA + chr2L 877896 3` UTR,intron CG15824 -,ninaA + chr2L 877967 3` UTR,intron CG15824 -,ninaA + chr2L_6_875001 chr2L_875001 RAL-426 21 chr2L 912266 912304 chr2L 912666 912688 7 398 13.0 13.5 13.2 0.5 422 chr2L 912266 intergenic not near genes chr2L 912477 intergenic not near genes chr2L 912688 intergenic CR44061 - chr2L_7_910001 chr2L_910001 RAL-426 22 chr2L 922444 922495 chr2L 922545 922596 10 98 1.0 2.5 1.8 3.6 152 chr2L 922444 intergenic CG4341 + chr2L 922520 intergenic CG4341 + chr2L 922596 intergenic CG4341 + chr2L_10_920001 chr2L_920001 RAL-426 23 chr2L 937040 937061 chr2L 937128 937157 4 94 2.5 4.5 3.5 0.9 117 chr2L 937040 intron CG4341 + chr2L 937098 intron CG4341 + chr2L 937157 intron CG4341 + chr2L_4_935001 chr2L_935001 RAL-426 24 chr2L 996699 996719 chr2L 1005818 1005838 roo 5 9119 3.0 2.0 2.5 1.4 9139 chr2L 996699 intergenic not near genes chr2L 1001268 intergenic not near genes chr2L 1005838 intergenic not near genes chr2L_5_1000001 chr2L_1000001 RAL-426 25 chr2L 1039222 1039255 chr2L 1039327 1039350 5 99 6.5 8.5 7.5 0.6 128 chr2L 1039222 intron IA-2 - chr2L 1039286 intron IA-2 - chr2L 1039350 intron IA-2 - chr2L_5_1035001 chr2L_1035001 RAL-426 26 chr2L 1073577 1073618 chr2L 1073682 1073727 7 106 13.5 19.0 16.2 0.4 150 chr2L 1073577 intron S - chr2L 1073652 intron S - chr2L 1073727 intron S - chr2L_7_1070001 chr2L_1070001 RAL-426 27 chr2L 1156874 1156892 chr2L 1156964 1157014 10 119 3.5 5.5 4.5 1.8 140 chr2L 1156874 intron capt - chr2L 1156944 intron capt - chr2L 1157014 intron capt - chr2L_10_1155001 chr2L_1155001 RAL-426 28 chr2L 1164231 1164273 chr2L 1164337 1164379 6 106 8.5 5.0 6.8 0.8 148 chr2L 1164231 intergenic IntS14 +,CG5080 - chr2L 1164305 intergenic IntS14 +,CG5080 - chr2L 1164379 intergenic IntS14 +,CG5080 - chr2L_6_1160001 chr2L_1160001 RAL-426 29 chr2L 1178664 1178701 chr2L 1178766 1178805 7 101 12.0 12.5 12.2 0.5 141 chr2L 1178664 intron CG4896 + chr2L 1178734 intron CG4896 + chr2L 1178805 intron CG4896 + chr2L_7_1175001 chr2L_1175001 RAL-426 30 chr2L 1186280 1186306 chr2L 1186370 1186401 5 92 4.5 5.0 4.8 0.9 121 chr2L 1186280 intron CG5001 + chr2L 1186340 intron CG5001 + chr2L 1186401 intron CG5001 + chr2L_5_1185001 chr2L_1185001 RAL-426 31 chr2L 1192662 1192681 chr2L 1192784 1192804 4 123 4.0 5.0 4.5 0.7 142 chr2L 1192662 intron CG5001 + chr2L 1192733 intron CG5001 + chr2L 1192804 intron CG5001 + chr2L_4_1190001 chr2L_1190001 RAL-426 32 chr2L 1220116 1220161 chr2L 1227602 1227645 blood 20 7484 5.0 1.5 3.2 4.8 7529 chr2L 1220116 intron CG42329 + chr2L 1223880 intron CG42329 + chr2L 1227645 intron CG42329 + chr2L_20_1220001 chr2L_1220001 RAL-426 33 chr2L 1237969 1237989 chr2L 1238073 1238093 4 104 6.0 4.5 5.2 0.6 124 chr2L 1237969 intergenic not near genes chr2L 1238031 intergenic not near genes chr2L 1238093 intergenic not near genes chr2L_4_1235001 chr2L_1235001 RAL-426 34 chr2L 1261217 1261225 chr2L 1261315 1261326 5 100 2.5 1.0 1.8 1.8 109 chr2L 1261217 intron robo3 + chr2L 1261272 intron robo3 + chr2L 1261326 intron robo3 + chr2L_5_1260001 chr2L_1260001 RAL-426 35 chr2L 1261226 1261261 chr2L 1261313 1261329 12 88 1.0 1.0 1.0 6.0 103 chr2L 1261226 intron robo3 + chr2L 1261278 intron robo3 + chr2L 1261329 intron robo3 + chr2L_12_1260001 chr2L_1260001 RAL-426 36 chr2L 1300722 1300740 chr2L 1300829 1300850 6 109 11.0 8.5 9.8 0.6 128 chr2L 1300722 intergenic not near genes chr2L 1300786 intergenic not near genes chr2L 1300850 intergenic not near genes chr2L_6_1300001 chr2L_1300001 RAL-426 37 chr2L 1320913 1320935 chr2L 1321037 1321059 4 122 10.0 8.0 9.0 0.4 146 chr2L 1320913 intergenic not near genes chr2L 1320986 intergenic not near genes chr2L 1321059 intergenic not near genes chr2L_4_1320001 chr2L_1320001 RAL-426 38 chr2L 1322011 1322056 chr2L 1322111 1322113 8 100 3.0 0.5 1.8 2.9 102 chr2L 1322011 intergenic not near genes chr2L 1322062 intergenic not near genes chr2L 1322113 intergenic not near genes chr2L_8_1320001 chr2L_1320001 RAL-426 39 chr2L 1552236 1552263 chr2L 1552336 1552372 6 105 6.5 7.0 6.8 0.8 136 chr2L 1552236 intergenic not near genes chr2L 1552304 intergenic not near genes chr2L 1552372 intergenic not near genes chr2L_6_1550001 chr2L_1550001 RAL-426 40 chr2L 1570673 1570714 chr2L 1573564 1573604 F-element 12 2889 6.5 0.0 3.2 2.9 2931 chr2L 1570673 intron haf + chr2L 1572138 intron haf + chr2L 1573604 intron haf + chr2L_12_1570001 chr2L_1570001 RAL-426 41 chr2L 1580304 1580327 chr2L 1580531 1580554 5 227 11.5 6.5 9.0 0.5 250 chr2L 1580304 intron haf + chr2L 1580429 intron haf + chr2L 1580554 intron haf + chr2L_5_1580001 chr2L_1580001 RAL-426 42 chr2L 1615383 1615408 chr2L 1615478 1615507 5 100 7.5 9.5 8.5 0.5 124 chr2L 1615383 intergenic not near genes chr2L 1615445 intergenic not near genes chr2L 1615507 intergenic not near genes chr2L_5_1615001 chr2L_1615001 RAL-426 43 chr2L 1646648 1646685 chr2L 1646748 1646786 8 98 12.5 11.0 11.8 0.6 138 chr2L 1646648 intergenic CR45695 - chr2L 1646717 intergenic CR45695 - chr2L 1646786 intergenic CR45695 - chr2L_8_1645001 chr2L_1645001 RAL-426 44 chr2L 1678966 1679008 chr2L 1686451 1686492 blood 6 7484 0.5 7.0 3.8 1.2 7526 chr2L 1678966 intron chinmo + chr2L 1682729 intron chinmo + chr2L 1686492 intron chinmo + chr2L_6_1680001 chr2L_1680001 RAL-426 45 chr2L 1711335 1711385 chr2L 1711679 1711690 mdg3 11 328 6.0 5.0 5.5 1.7 355 chr2L 1711335 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711512 3` UTR frtz - chr2L 1711690 3` UTR frtz - chr2L_11_1710001 chr2L_1710001 RAL-426 46 chr2L 1883396 1883416 chr2L 1883999 1884000 4 598 6.0 2.0 4.0 0.8 604 chr2L 1883396 intron CG15358 - chr2L 1883698 intron CG15358 - chr2L 1884000 exon CG15358 - chr2L_4_1880001 chr2L_1880001 RAL-426 47 chr2L 1888572 1888583 chr2L 1888688 1888703 4 118 16.0 12.0 14.0 0.3 131 chr2L 1888572 intron CG7337 + chr2L 1888638 intron CG7337 + chr2L 1888703 intron CG7337 + chr2L_4_1885001 chr2L_1885001 RAL-426 48 chr2L 1888589 1888608 chr2L 1888687 1888726 5 112 15.5 11.5 13.5 0.3 137 chr2L 1888589 intron CG7337 + chr2L 1888658 intron CG7337 + chr2L 1888726 intron CG7337 + chr2L_5_1885001 chr2L_1885001 RAL-426 49 chr2L 1925478 1925499 chr2L 1925575 1925596 9 96 4.5 4.0 4.2 1.7 118 chr2L 1925478 intron CG7337 + chr2L 1925537 intron CG7337 + chr2L 1925596 intron CG7337 + chr2L_9_1925001 chr2L_1925001 RAL-426 50 chr2L 1948618 1948632 chr2L 1948732 1948759 7 125 0.0 0.0 0.0 7.0 141 chr2L 1948618 intergenic not near genes chr2L 1948688 intergenic not near genes chr2L 1948759 intergenic not near genes chr2L_7_1945001 chr2L_1945001 RAL-426 51 chr2L 1994564 1994595 chr2L 1994814 1994845 6 250 18.5 15.5 17.0 0.3 281 chr2L 1994564 intergenic not near genes chr2L 1994704 intergenic not near genes chr2L 1994845 intergenic not near genes chr2L_6_1990001 chr2L_1990001 RAL-426 52 chr2L 2024505 2024547 chr2L 2024599 2024655 4 104 11.0 9.5 10.2 0.4 150 chr2L 2024505 intron CG4238 + chr2L 2024580 intron CG4238 + chr2L 2024655 intron CG4238 + chr2L_4_2020001 chr2L_2020001 RAL-426 53 chr2L 2049204 2049239 chr2L 2049299 2049337 5 101 6.0 13.5 9.8 0.5 133 chr2L 2049204 intergenic not near genes chr2L 2049270 intergenic not near genes chr2L 2049337 intergenic not near genes chr2L_5_2045001 chr2L_2045001 RAL-426 54 chr2L 2100379 2100408 chr2L 2109547 2109566 roo 10 9163 3.0 7.5 5.2 1.6 9187 chr2L 2100379 intron dpr3 - chr2L 2104972 intron dpr3 - chr2L 2109566 intron dpr3 - chr2L_10_2100001 chr2L_2100001 RAL-426 55 chr2L 2112092 2112144 chr2L 2119774 2119823 opus 9 7669 2.0 4.5 3.2 2.1 7731 chr2L 2112092 intergenic not near genes chr2L 2115958 intergenic not near genes chr2L 2119823 intergenic not near genes chr2L_9_2115001 chr2L_2115001 RAL-426 56 chr2L 2205002 2205048 chr2L 2205395 2205440 7 381 10.5 11.5 11.0 0.6 438 chr2L 2205002 exon CG31668 - chr2L 2205221 intron CG31668 - chr2L 2205440 intron CG31668 - chr2L_7_2205001 chr2L_2205001 RAL-426 57 chr2L 2207656 2207691 chr2L 2207748 2207769 6 85 10.5 10.0 10.2 0.5 113 chr2L 2207656 exon CG33124 - chr2L 2207712 exon CG33124 - chr2L 2207769 exon CG33124 - chr2L_6_2205001 chr2L_2205001 RAL-426 58 chr2L 2262299 2262338 chr2L 2262396 2262403 5 90 10.0 7.5 8.8 0.5 104 chr2L 2262299 intergenic not near genes chr2L 2262351 intergenic not near genes chr2L 2262403 intergenic not near genes chr2L_5_2260001 chr2L_2260001 RAL-426 59 chr2L 2290563 2290616 chr2L 2290658 2290677 10 81 1.5 4.0 2.8 2.6 114 chr2L 2290563 exon robl22E - chr2L 2290620 exon robl22E - chr2L 2290677 intron robl22E - chr2L_10_2290001 chr2L_2290001 RAL-426 60 chr2L 2293271 2293294 chr2L 2293378 2293406 7 106 2.5 10.5 6.5 0.9 135 chr2L 2293271 intergenic not near genes chr2L 2293338 intergenic not near genes chr2L 2293406 intergenic not near genes chr2L_7_2290001 chr2L_2290001 RAL-426 61 chr2L 2317607 2317622 chr2L 2317672 2317706 6 79 27.5 22.0 24.8 0.2 99 chr2L 2317607 intron,intron CG9967 -,eys + chr2L 2317656 intron,intron CG9967 -,eys + chr2L 2317706 intron,intron CG9967 -,eys + chr2L_6_2315001 chr2L_2315001 RAL-426 62 chr2L 2326527 2326571 chr2L 2326642 2326651 4 104 3.0 7.0 5.0 0.7 124 chr2L 2326527 intron,intron CG9967 -,eys + chr2L 2326589 intron,intron CG9967 -,eys + chr2L 2326651 intron,intron CG9967 -,eys + chr2L_4_2325001 chr2L_2325001 RAL-426 63 chr2L 2330854 2330888 chr2L 2330963 2330995 4 108 5.5 5.0 5.2 0.6 141 chr2L 2330854 intron,intron CG9967 -,eys + chr2L 2330924 intron,intron CG9967 -,eys + chr2L 2330995 intron,intron CG9967 -,eys + chr2L_4_2330001 chr2L_2330001 RAL-426 64 chr2L 2380426 2380460 chr2L 2380522 2380556 9 95 6.0 7.5 6.8 1.2 130 chr2L 2380426 3` UTR Atxn7 + chr2L 2380491 3` UTR Atxn7 + chr2L 2380556 intergenic Atxn7 + chr2L_9_2380001 chr2L_2380001 RAL-426 65 chr2L 2427361 2427401 chr2L 2427466 2427505 5 104 13.5 8.0 10.8 0.4 144 chr2L 2427361 3` UTR CR44912 - chr2L 2427433 3` UTR CR44912 - chr2L 2427505 3` UTR CR44912 - chr2L_5_2425001 chr2L_2425001 RAL-426 66 chr2L 2498177 2498210 chr2L 2498271 2498280 5 93 5.5 7.5 6.5 0.7 103 chr2L 2498177 3` UTR oaf + chr2L 2498228 3` UTR oaf + chr2L 2498280 3` UTR oaf + chr2L_5_2495001 chr2L_2495001 RAL-426 67 chr2L 2541430 2541479 chr2L 2541532 2541581 9 102 10.0 6.0 8.0 1.0 151 chr2L 2541430 intergenic not near genes chr2L 2541506 intergenic not near genes chr2L 2541581 intergenic not near genes chr2L_9_2540001 chr2L_2540001 RAL-426 68 chr2L 2552723 2552767 chr2L 2552823 2552865 8 96 8.5 8.5 8.5 0.8 142 chr2L 2552723 exon CG3515 - chr2L 2552794 5` UTR CG3515 - chr2L 2552865 intergenic CG3515 - chr2L_8_2550001 chr2L_2550001 RAL-426 69 chr2L 2565517 2565567 chr2L 2571605 2571619 297 9 6082 3.5 3.5 3.5 2.0 6102 chr2L 2565517 exon Cyp309a2 - chr2L 2568568 intron Cyp309a2 - chr2L 2571619 intron Cyp309a2 - chr2L_9_2565001 chr2L_2565001 RAL-426 70 chr2L 2605456 2605485 chr2L 2605770 2605810 5 322 10.5 12.5 11.5 0.4 354 chr2L 2605456 intergenic not near genes chr2L 2605633 intergenic not near genes chr2L 2605810 intergenic not near genes chr2L_5_2605001 chr2L_2605001 RAL-426 71 chr2L 2618023 2618068 chr2L 2618122 2618166 8 99 9.5 5.5 7.5 0.9 143 chr2L 2618023 intergenic not near genes chr2L 2618094 intergenic not near genes chr2L 2618166 intergenic not near genes chr2L_8_2615001 chr2L_2615001 RAL-426 72 chr2L 2661219 2661231 chr2L 2663033 2663070 I-element 8 1830 3.0 3.0 3.0 2.0 1851 chr2L 2661219 intergenic not near genes chr2L 2662144 intergenic not near genes chr2L 2663070 intergenic not near genes chr2L_8_2660001 chr2L_2660001 RAL-426 73 chr2L 2667608 2667647 chr2L 2667707 2667746 5 93 13.0 10.5 11.8 0.4 138 chr2L 2667608 intergenic not near genes chr2L 2667677 intergenic not near genes chr2L 2667746 intergenic not near genes chr2L_5_2665001 chr2L_2665001 RAL-426 74 chr2L 2772595 2772611 chr2L 2779199 2779215 297 5 6604 7.0 5.5 6.2 0.7 6620 chr2L 2772595 3` UTR Syt1 - chr2L 2775905 intron Syt1 - chr2L 2779215 3` UTR Syt1 - chr2L_5_2775001 chr2L_2775001 RAL-426 75 chr2L 2826523 2826576 chr2L 2826635 2826681 6 106 7.0 12.5 9.8 0.6 158 chr2L 2826523 intron Duox - chr2L 2826602 intron Duox - chr2L 2826681 intron Duox - chr2L_6_2825001 chr2L_2825001 RAL-426 76 chr2L 2933286 2933301 chr2L 2935478 2935503 pogo 4 2201 7.5 9.0 8.2 0.4 2217 chr2L 2933286 intron lilli + chr2L 2934394 intron lilli + chr2L 2935503 intron lilli + chr2L_4_2930001 chr2L_2930001 RAL-426 77 chr2L 2937404 2937446 chr2L 2937500 2937539 11 95 10.0 10.0 10.0 1.0 135 chr2L 2937404 intron lilli + chr2L 2937472 intron lilli + chr2L 2937539 intron lilli + chr2L_11_2935001 chr2L_2935001 RAL-426 78 chr2L 2964289 2964307 chr2L 2964385 2964405 4 97 3.5 2.5 3.0 1.0 116 chr2L 2964289 3` UTR Rbp9 + chr2L 2964347 3` UTR Rbp9 + chr2L 2964405 3` UTR Rbp9 + chr2L_4_2960001 chr2L_2960001 RAL-426 79 chr2L 3016144 3016148 chr2L 3016216 3016241 6 90 10.5 12.0 11.2 0.5 97 chr2L 3016144 intergenic CG17265 +,CG17224 - chr2L 3016192 intergenic CG17265 +,CG17224 - chr2L 3016241 intergenic CG17265 +,CG17224 - chr2L_6_3015001 chr2L_3015001 RAL-426 80 chr2L 3049218 3049247 chr2L 3049324 3049353 5 105 10.5 9.0 9.8 0.5 135 chr2L 3049218 intron v(2)k05816 + chr2L 3049286 intron v(2)k05816 + chr2L 3049353 intron v(2)k05816 + chr2L_5_3045001 chr2L_3045001 RAL-426 81 chr2L 3097635 3097658 chr2L 3097730 3097746 6 97 14.0 13.5 13.8 0.4 111 chr2L 3097635 intron toc - chr2L 3097690 intron toc - chr2L 3097746 intron toc - chr2L_6_3095001 chr2L_3095001 RAL-426 82 chr2L 3108857 3108890 chr2L 3108953 3108987 10 94 3.0 6.0 4.5 1.8 130 chr2L 3108857 exon toc - chr2L 3108922 intron toc - chr2L 3108987 intron toc - chr2L_10_3105001 chr2L_3105001 RAL-426 83 chr2L 3113380 3113427 chr2L 3113498 3113546 10 117 8.5 10.0 9.2 1.0 166 chr2L 3113380 intron toc - chr2L 3113463 intron toc - chr2L 3113546 intron toc - chr2L_10_3110001 chr2L_3110001 RAL-426 84 chr2L 3134273 3134290 chr2L 3134369 3134386 4 96 3.0 5.0 4.0 0.8 113 chr2L 3134273 intron toc - chr2L 3134330 intron toc - chr2L 3134386 intron toc - chr2L_4_3130001 chr2L_3130001 RAL-426 85 chr2L 3201098 3201145 chr2L 3201200 3201224 8 98 17.0 15.5 16.2 0.5 126 chr2L 3201098 intergenic not near genes chr2L 3201161 intergenic not near genes chr2L 3201224 intergenic not near genes chr2L_8_3200001 chr2L_3200001 RAL-426 86 chr2L 3233623 3233650 chr2L 3233793 3233814 5 169 13.0 13.0 13.0 0.4 191 chr2L 3233623 intergenic not near genes chr2L 3233718 intergenic not near genes chr2L 3233814 intergenic not near genes chr2L_5_3230001 chr2L_3230001 RAL-426 87 chr2L 3251474 3251522 chr2L 3259059 3259107 springer 14 7585 5.0 5.5 5.2 2.3 7633 chr2L 3251474 intergenic not near genes chr2L 3255290 intergenic not near genes chr2L 3259107 intergenic not near genes chr2L_14_3255001 chr2L_3255001 RAL-426 88 chr2L 3271130 3271171 chr2L 3271272 3271313 10 141 16.0 16.0 16.0 0.6 183 chr2L 3271130 exon CG3347 + chr2L 3271222 exon CG3347 + chr2L 3271313 exon CG3347 + chr2L_10_3270001 chr2L_3270001 RAL-426 89 chr2L 3291225 3291268 chr2L 3291325 3291363 7 98 0.5 5.5 3.0 1.8 138 chr2L 3291225 intergenic CG9664 - chr2L 3291294 3` UTR CG9664 - chr2L 3291363 3` UTR CG9664 - chr2L_7_3290001 chr2L_3290001 RAL-426 90 chr2L 3294337 3294382 chr2L 3294454 3294498 5 117 11.5 12.5 12.0 0.4 161 chr2L 3294337 5` UTR CG9664 - chr2L 3294418 5` UTR CG9664 - chr2L 3294498 5` UTR CG9664 - chr2L_5_3290001 chr2L_3290001 RAL-426 91 chr2L 3314524 3314566 chr2L 3314622 3314655 7 98 15.5 14.5 15.0 0.4 131 chr2L 3314524 intron CG3277 + chr2L 3314590 intron CG3277 + chr2L 3314655 intron CG3277 + chr2L_7_3310001 chr2L_3310001 RAL-426 92 chr2L 3323249 3323281 chr2L 3323376 3323381 9 119 13.0 14.0 13.5 0.6 132 chr2L 3323249 intergenic CG8837 + chr2L 3323315 intergenic CG8837 + chr2L 3323381 intergenic CG8837 + chr2L_9_3320001 chr2L_3320001 RAL-426 93 chr2L 3351196 3351241 chr2L 3351301 3351348 7 108 9.5 6.0 7.8 0.8 152 chr2L 3351196 intron E23 - chr2L 3351272 intron E23 - chr2L 3351348 intron E23 - chr2L_7_3350001 chr2L_3350001 RAL-426 94 chr2L 3395012 3395051 chr2L 3395114 3395153 10 100 11.5 8.0 9.8 0.9 141 chr2L 3395012 intergenic not near genes chr2L 3395082 intergenic not near genes chr2L 3395153 intergenic not near genes chr2L_10_3395001 chr2L_3395001 RAL-426 95 chr2L 3508335 3508375 chr2L 3508432 3508473 7 97 2.0 4.5 3.2 1.7 138 chr2L 3508335 intergenic tim -,CR45299 + chr2L 3508404 intergenic CR45299 +,tim - chr2L 3508473 intergenic CR45299 +,tim - chr2L_7_3505001 chr2L_3505001 RAL-426 96 chr2L 3535484 3535495 chr2L 3535583 3535595 4 100 8.5 11.0 9.8 0.4 111 chr2L 3535484 intergenic not near genes chr2L 3535540 intergenic not near genes chr2L 3535595 intergenic not near genes chr2L_4_3535001 chr2L_3535001 RAL-426 97 chr2L 3582881 3582902 chr2L 3582957 3582999 4 91 2.5 5.0 3.8 0.8 118 chr2L 3582881 intergenic not near genes chr2L 3582940 intergenic not near genes chr2L 3582999 intergenic not near genes chr2L_4_3580001 chr2L_3580001 RAL-426 98 chr2L 3603611 3603646 chr2L 3603721 3603762 9 113 17.0 17.0 17.0 0.5 151 chr2L 3603611 intergenic not near genes chr2L 3603686 intergenic not near genes chr2L 3603762 intergenic odd - chr2L_9_3600001 chr2L_3600001 RAL-426 99 chr2L 3616581 3616592 chr2L 3616663 3616689 6 91 3.5 8.5 6.0 0.9 108 chr2L 3616581 5` UTR CR44310 + chr2L 3616635 5` UTR CR44310 + chr2L 3616689 5` UTR CR44310 + chr2L_6_3615001 chr2L_3615001 RAL-426 100 chr2L 3634118 3634133 chr2L 3634185 3634197 5 87 6.0 7.5 6.8 0.6 79 chr2L 3634118 intron for - chr2L 3634158 intron for - chr2L 3634197 intron for - chr2L_5_3630001 chr2L_3630001 RAL-426 101 chr2L 3663291 3663342 chr2L 3663390 3663417 8 95 13.0 13.0 13.0 0.6 126 chr2L 3663291 5` UTR CG34340 + chr2L 3663354 intron CG34340 + chr2L 3663417 intron CG34340 + chr2L_8_3660001 chr2L_3660001 RAL-426 102 chr2L 3667956 3668061 chr2L 3668057 3668157 7 102 6.5 3.0 4.8 1.2 201 chr2L 3667956 intron CG34340 + chr2L 3668056 intron,3` UTR CG34340 +,Sfp24Ba - chr2L 3668157 intron,exon CG34340 +,Sfp24Ba - chr2L_7_3665001 chr2L_3665001 RAL-426 103 chr2L 3819023 3819054 chr2L 3819124 3819156 6 102 11.0 13.0 12.0 0.5 133 chr2L 3819023 intergenic CR44077 + chr2L 3819090 intergenic not near genes chr2L 3819156 intergenic not near genes chr2L_6_3815001 chr2L_3815001 RAL-426 104 chr2L 3936635 3936655 chr2L 3936735 3936755 7 100 2.5 3.5 3.0 1.8 120 chr2L 3936635 intron fred - chr2L 3936695 intron fred - chr2L 3936755 intron fred - chr2L_7_3935001 chr2L_3935001 RAL-426 105 chr2L 3943794 3943823 chr2L 3943905 3943934 5 111 4.0 6.0 5.0 0.8 140 chr2L 3943794 intron fred - chr2L 3943864 intron fred - chr2L 3943934 intron fred - chr2L_5_3940001 chr2L_3940001 RAL-426 106 chr2L 3959158 3959199 chr2L 3959253 3959295 7 96 13.5 12.0 12.8 0.5 137 chr2L 3959158 intron fred - chr2L 3959226 intron fred - chr2L 3959295 intron fred - chr2L_7_3955001 chr2L_3955001 RAL-426 107 chr2L 3997525 3997579 chr2L 3997635 3997686 6 104 0.0 6.0 3.0 1.5 161 chr2L 3997525 intergenic not near genes chr2L 3997606 intergenic not near genes chr2L 3997686 intergenic not near genes chr2L_6_3995001 chr2L_3995001 RAL-426 108 chr2L 4001650 4001685 chr2L 4001768 4001803 7 116 3.5 12.0 7.8 0.8 153 chr2L 4001650 intergenic CR45344 + chr2L 4001726 intergenic CR45344 + chr2L 4001803 intergenic CR45344 + chr2L_7_4000001 chr2L_4000001 RAL-426 109 chr2L 4034085 4034130 chr2L 4034453 4034498 14 372 27.5 22.5 25.0 0.5 413 chr2L 4034085 intron ed + chr2L 4034292 intron ed + chr2L 4034498 intron ed + chr2L_14_4030001 chr2L_4030001 RAL-426 110 chr2L 4060166 4060199 chr2L 4060262 4060295 6 93 4.0 4.0 4.0 1.2 129 chr2L 4060166 intron ed + chr2L 4060230 intron ed + chr2L 4060295 intron ed + chr2L_6_4060001 chr2L_4060001 RAL-426 111 chr2L 4066028 4066048 chr2L 4068872 4068885 Juan 5 2842 7.0 2.5 4.8 0.9 2857 chr2L 4066028 intron ed + chr2L 4067456 intron ed + chr2L 4068885 intron ed + chr2L_5_4065001 chr2L_4065001 RAL-426 112 chr2L 4083010 4083031 chr2L 4083093 4083120 4 93 10.5 8.5 9.5 0.4 110 chr2L 4083010 intron ed + chr2L 4083065 intron ed + chr2L 4083120 intron ed + chr2L_4_4080001 chr2L_4080001 RAL-426 113 chr2L 4150647 4150654 chr2L 4150702 4150705 4 71 9.0 9.5 9.2 0.4 58 chr2L 4150647 exon CG2955 + chr2L 4150676 exon CG2955 + chr2L 4150705 exon CG2955 + chr2L_4_4150001 chr2L_4150001 RAL-426 114 chr2L 4152252 4152252 chr2L 16217660 16217660 4 12065408 22.5 23.5 23.0 0.2 12065408 chr2L 4152252 intergenic not near genes chr2L 10184956 exon Sur - chr2L 16217660 intergenic not near genes chr2L_4_10180001 chr2L_10180001 RAL-426 115 chr2L 4166357 4166410 chr2L 4166459 4166513 10 101 3.5 4.5 4.0 2.0 156 chr2L 4166357 intergenic Or24a - chr2L 4166435 intergenic Or24a - chr2L 4166513 intergenic Or24a - chr2L_10_4165001 chr2L_4165001 RAL-426 116 chr2L 4285706 4285734 chr2L 4285799 4285831 6 97 11.0 14.5 12.8 0.4 125 chr2L 4285706 intron tutl + chr2L 4285768 intron tutl + chr2L 4285831 intron tutl + chr2L_6_4285001 chr2L_4285001 RAL-426 117 chr2L 4305220 4305269 chr2L 4305318 4305367 5 97 12.0 13.0 12.5 0.4 147 chr2L 4305220 intron tutl + chr2L 4305294 intron tutl + chr2L 4305367 intron tutl + chr2L_5_4305001 chr2L_4305001 RAL-426 118 chr2L 4317889 4317912 chr2L 4317970 4317977 6 83 10.5 11.5 11.0 0.5 88 chr2L 4317889 intron tutl + chr2L 4317933 intron tutl + chr2L 4317977 intron tutl + chr2L_6_4315001 chr2L_4315001 RAL-426 119 chr2L 4351472 4351501 chr2L 4351559 4351597 5 92 14.0 18.0 16.0 0.3 125 chr2L 4351472 intergenic CR44700 + chr2L 4351534 intergenic CR44700 + chr2L 4351597 intergenic CR44700 + chr2L_5_4350001 chr2L_4350001 RAL-426 120 chr2L 4388838 4388873 chr2L 4388945 4388978 6 106 6.5 3.5 5.0 1.0 140 chr2L 4388838 exon Tps1 + chr2L 4388908 intron Tps1 + chr2L 4388978 intron Tps1 + chr2L_6_4385001 chr2L_4385001 RAL-426 121 chr2L 4477133 4477162 chr2L 4477320 4477347 5 185 20.5 11.5 16.0 0.3 214 chr2L 4477133 intergenic ine -,dp - chr2L 4477240 intergenic ine -,dp - chr2L 4477347 intergenic dp -,ine - chr2L_5_4475001 chr2L_4475001 RAL-426 122 chr2L 4586962 4586987 chr2L 4587074 4587084 9 107 11.5 16.5 14.0 0.6 122 chr2L 4586962 intron dp - chr2L 4587023 intron dp - chr2L 4587084 intron dp - chr2L_9_4585001 chr2L_4585001 RAL-426 123 chr2L 4601683 4601734 chr2L 4609144 4609195 mdg1 17 7460 3.0 3.5 3.2 4.0 7512 chr2L 4601683 intron dp - chr2L 4605439 intron dp - chr2L 4609195 intron dp - chr2L_17_4605001 chr2L_4605001 RAL-426 124 chr2L 4626328 4626351 chr2L 4626771 4626796 6 442 15.0 9.5 12.2 0.5 468 chr2L 4626328 intergenic not near genes chr2L 4626562 intergenic not near genes chr2L 4626796 intergenic not near genes chr2L_6_4625001 chr2L_4625001 RAL-426 125 chr2L 4628119 4628133 chr2L 4628216 4628231 5 97 9.5 9.5 9.5 0.5 112 chr2L 4628119 intergenic not near genes chr2L 4628175 intergenic not near genes chr2L 4628231 intergenic not near genes chr2L_5_4625001 chr2L_4625001 RAL-426 126 chr2L 4630645 4630671 chr2L 4630744 4630770 4 96 9.0 5.5 7.2 0.5 125 chr2L 4630645 intergenic not near genes chr2L 4630708 intergenic not near genes chr2L 4630770 intergenic not near genes chr2L_4_4630001 chr2L_4630001 RAL-426 127 chr2L 4661824 4661848 chr2L 4669424 4669424 opus 6 7595 6.0 6.0 6.0 0.9 7600 chr2L 4661824 intergenic not near genes chr2L 4665624 intergenic not near genes chr2L 4669424 intergenic not near genes chr2L_6_4665001 chr2L_4665001 RAL-426 128 chr2L 4748691 4748725 chr2L 4748790 4748796 7 91 10.0 12.0 11.0 0.6 105 chr2L 4748691 intron CG15630 - chr2L 4748744 intron CG15630 - chr2L 4748796 intron CG15630 - chr2L_7_4745001 chr2L_4745001 RAL-426 129 chr2L 4802325 4802367 chr2L 4802675 4802716 8 343 6.0 7.0 6.5 1.1 391 chr2L 4802325 intergenic Clect27 - chr2L 4802520 intergenic not near genes chr2L 4802716 intergenic not near genes chr2L_8_4800001 chr2L_4800001 RAL-426 130 chr2L 4819474 4819516 chr2L 4819617 4819654 12 139 3.0 3.5 3.2 2.9 180 chr2L 4819474 intergenic not near genes chr2L 4819564 intergenic not near genes chr2L 4819654 intergenic not near genes chr2L_12_4815001 chr2L_4815001 RAL-426 131 chr2L 4858454 4858481 chr2L 4858562 4858589 7 107 8.0 8.0 8.0 0.8 135 chr2L 4858454 intron pog + chr2L 4858522 intron pog + chr2L 4858589 intron pog + chr2L_7_4855001 chr2L_4855001 RAL-426 132 chr2L 4866197 4866211 chr2L 4866305 4866318 4 108 6.0 11.5 8.8 0.4 121 chr2L 4866197 intron pog + chr2L 4866258 intron pog + chr2L 4866318 intron pog + chr2L_4_4865001 chr2L_4865001 RAL-426 133 chr2L 4918150 4918188 chr2L 4923243 4923280 jockey 4 5093 3.5 4.0 3.8 0.8 5130 chr2L 4918150 intron hoe1 - chr2L 4920715 intron hoe1 - chr2L 4923280 intron hoe1 - chr2L_4_4920001 chr2L_4920001 RAL-426 134 chr2L 4929124 4929148 chr2L 4929229 4929253 6 103 8.0 7.0 7.5 0.7 129 chr2L 4929124 intron hoe1 - chr2L 4929188 intron hoe1 - chr2L 4929253 intron hoe1 - chr2L_6_4925001 chr2L_4925001 RAL-426 135 chr2L 5040668 5040713 chr2L 5040784 5040829 6 116 9.0 10.5 9.8 0.6 161 chr2L 5040668 3` UTR,3` UTR,3` UTR CG14042 +,SP555 +,CG31650 - chr2L 5040748 3` UTR,3` UTR,3` UTR CG14042 +,SP555 +,CG31650 - chr2L 5040829 3` UTR CG31650 - chr2L_6_5040001 chr2L_5040001 RAL-426 136 chr2L 5092406 5092443 chr2L 5092513 5092527 9 103 1.5 2.5 2.0 3.0 121 chr2L 5092406 intron pgant5 - chr2L 5092466 intron pgant5 - chr2L 5092527 intron pgant5 - chr2L_9_5090001 chr2L_5090001 RAL-426 137 chr2L 5117280 5117319 chr2L 5117382 5117420 11 101 3.5 2.5 3.0 2.8 140 chr2L 5117280 intron Msp300 + chr2L 5117350 intron Msp300 + chr2L 5117420 intron Msp300 + chr2L_11_5115001 chr2L_5115001 RAL-426 138 chr2L 5120972 5120976 chr2L 5121072 5121090 4 110 11.5 2.5 7.0 0.5 118 chr2L 5120972 intron Msp300 + chr2L 5121031 intron Msp300 + chr2L 5121090 intron Msp300 + chr2L_4_5120001 chr2L_5120001 RAL-426 139 chr2L 5120979 5120993 chr2L 5121070 5121106 8 103 8.5 2.0 5.2 1.3 127 chr2L 5120979 intron Msp300 + chr2L 5121042 intron Msp300 + chr2L 5121106 intron Msp300 + chr2L_8_5120001 chr2L_5120001 RAL-426 140 chr2L 5237887 5237936 chr2L 5237997 5238020 6 98 14.0 11.5 12.8 0.4 133 chr2L 5237887 intron tkv - chr2L 5237954 intron tkv - chr2L 5238020 intron tkv - chr2L_6_5235001 chr2L_5235001 RAL-426 141 chr2L 5276709 5276730 chr2L 5276809 5276834 8 103 9.5 16.5 13.0 0.6 125 chr2L 5276709 exon Bsg25D - chr2L 5276772 intron Bsg25D - chr2L 5276834 intron Bsg25D - chr2L_8_5275001 chr2L_5275001 RAL-426 142 chr2L 5378412 5378444 chr2L 5378511 5378543 5 98 9.0 9.0 9.0 0.5 131 chr2L 5378412 intergenic not near genes chr2L 5378478 intergenic not near genes chr2L 5378543 intergenic not near genes chr2L_5_5375001 chr2L_5375001 RAL-426 143 chr2L 5475132 5475164 chr2L 5475257 5475289 6 124 4.5 3.0 3.8 1.2 157 chr2L 5475132 intergenic not near genes chr2L 5475210 intergenic not near genes chr2L 5475289 intergenic not near genes chr2L_6_5475001 chr2L_5475001 RAL-426 144 chr2L 5487997 5488035 chr2L 5488097 5488135 6 95 3.5 7.0 5.2 1.0 138 chr2L 5487997 intergenic not near genes chr2L 5488066 intergenic not near genes chr2L 5488135 intergenic not near genes chr2L_6_5485001 chr2L_5485001 RAL-426 145 chr2L 5494551 5494569 chr2L 5494655 5494686 4 112 13.5 13.0 13.2 0.3 135 chr2L 5494551 intergenic not near genes chr2L 5494618 intergenic not near genes chr2L 5494686 intergenic not near genes chr2L_4_5490001 chr2L_5490001 RAL-426 146 chr2L 5513045 5513076 chr2L 5513143 5513158 7 96 16.5 14.0 15.2 0.4 113 chr2L 5513045 intergenic not near genes chr2L 5513102 intergenic not near genes chr2L 5513158 intergenic not near genes chr2L_7_5510001 chr2L_5510001 RAL-426 147 chr2L 5582313 5582331 chr2L 5582422 5582441 4 110 10.5 8.5 9.5 0.4 128 chr2L 5582313 intergenic not near genes chr2L 5582377 intergenic not near genes chr2L 5582441 intergenic not near genes chr2L_4_5580001 chr2L_5580001 RAL-426 148 chr2L 5666275 5666306 chr2L 5666383 5666415 4 103 13.5 9.5 11.5 0.3 140 chr2L 5666275 intron Hsp60C + chr2L 5666345 intron Hsp60C + chr2L 5666415 intron Hsp60C + chr2L_4_5665001 chr2L_5665001 RAL-426 149 chr2L 5720246 5720294 chr2L 5720353 5720399 14 101 12.0 13.5 12.8 1.0 153 chr2L 5720246 intron CG11149 - chr2L 5720322 intron CG11149 - chr2L 5720399 intron CG11149 - chr2L_14_5720001 chr2L_5720001 RAL-426 150 chr2L 5762372 5762405 chr2L 5762515 5762548 5 138 7.5 4.0 5.8 0.7 176 chr2L 5762372 3` UTR CG11030 + chr2L 5762460 intergenic CG11030 +,obst-E - chr2L 5762548 intergenic obst-E -,CG11030 + chr2L_5_5760001 chr2L_5760001 RAL-426 151 chr2L 5780895 5780925 chr2L 5781014 5781049 4 118 10.0 10.0 10.0 0.4 154 chr2L 5780895 intron CG9171 - chr2L 5780972 intron CG9171 - chr2L 5781049 intron CG9171 - chr2L_4_5780001 chr2L_5780001 RAL-426 152 chr2L 5780928 5780937 chr2L 5781013 5781060 4 112 8.0 10.0 9.0 0.4 132 chr2L 5780928 intron CG9171 - chr2L 5780994 intron CG9171 - chr2L 5781060 intron CG9171 - chr2L_4_5780001 chr2L_5780001 RAL-426 153 chr2L 5814672 5814713 chr2L 5814774 5814815 14 102 2.5 3.0 2.8 3.7 143 chr2L 5814672 intergenic not near genes chr2L 5814744 intergenic not near genes chr2L 5814815 intergenic not near genes chr2L_14_5810001 chr2L_5810001 RAL-426 154 chr2L 5827700 5827712 chr2L 5836722 5836724 roo 4 9022 9.0 9.5 9.2 0.4 9024 chr2L 5827700 intron TrissinR + chr2L 5832212 intron TrissinR + chr2L 5836724 intron TrissinR + chr2L_4_5830001 chr2L_5830001 RAL-426 155 chr2L 5827718 5827741 chr2L 5836714 5836756 roo 13 9017 4.0 6.5 5.2 2.1 9038 chr2L 5827718 intron TrissinR + chr2L 5832237 intron TrissinR + chr2L 5836756 intron TrissinR + chr2L_13_5830001 chr2L_5830001 RAL-426 156 chr2L 5843824 5843864 chr2L 5843929 5843971 7 105 10.0 13.0 11.5 0.6 147 chr2L 5843824 intron TrissinR + chr2L 5843898 intron TrissinR + chr2L 5843971 intron TrissinR + chr2L_7_5840001 chr2L_5840001 RAL-426 157 chr2L 5870731 5870749 chr2L 5870826 5870837 7 96 7.5 11.5 9.5 0.7 106 chr2L 5870731 intron rau - chr2L 5870784 intron rau - chr2L 5870837 intron rau - chr2L_7_5870001 chr2L_5870001 RAL-426 158 chr2L 5887590 5887633 chr2L 5887691 5887733 10 99 7.0 10.0 8.5 1.1 143 chr2L 5887590 3` UTR CR44577 - chr2L 5887662 3` UTR CR44577 - chr2L 5887733 3` UTR CR44577 - chr2L_10_5885001 chr2L_5885001 RAL-426 159 chr2L 5897577 5897620 chr2L 5897680 5897692 13 87 16.5 16.5 16.5 0.7 115 chr2L 5897577 intergenic not near genes chr2L 5897634 intergenic not near genes chr2L 5897692 intergenic not near genes chr2L_13_5895001 chr2L_5895001 RAL-426 160 chr2L 5926305 5926596 chr2L 5926451 5926694 5 134 2.0 0.0 1.0 2.5 389 chr2L 5926305 intron dsf + chr2L 5926500 intron dsf + chr2L 5926694 intron dsf + chr2L_5_5925001 chr2L_5925001 RAL-426 161 chr2L 5931308 5931329 chr2L 5931440 5931460 7 132 1.5 3.5 2.5 2.0 152 chr2L 5931308 intron dsf + chr2L 5931384 intron dsf + chr2L 5931460 intron dsf + chr2L_7_5930001 chr2L_5930001 RAL-426 162 chr2L 5962247 5962282 chr2L 5962343 5962354 6 89 6.0 5.5 5.8 0.9 107 chr2L 5962247 intergenic not near genes chr2L 5962300 intergenic not near genes chr2L 5962354 intergenic not near genes chr2L_6_5960001 chr2L_5960001 RAL-426 163 chr2L 5989013 5989043 chr2L 5989109 5989139 4 92 16.5 11.5 14.0 0.3 126 chr2L 5989013 intergenic ifc +,lid - chr2L 5989076 intergenic ifc +,lid - chr2L 5989139 intergenic lid -,ifc + chr2L_4_5985001 chr2L_5985001 RAL-426 164 chr2L 5993313 5993361 chr2L 5993424 5993466 12 109 7.0 7.0 7.0 1.5 153 chr2L 5993313 exon lid - chr2L 5993390 intron lid - chr2L 5993466 intron lid - chr2L_12_5990001 chr2L_5990001 RAL-426 165 chr2L 6002419 6002458 chr2L 6002525 6002564 6 106 4.0 4.0 4.0 1.2 145 chr2L 6002419 3` UTR Tsp26A + chr2L 6002492 3` UTR Tsp26A + chr2L 6002564 3` UTR Tsp26A + chr2L_6_6000001 chr2L_6000001 RAL-426 166 chr2L 6070911 6070924 chr2L 6070997 6071019 4 99 0.0 5.0 2.5 1.1 108 chr2L 6070911 intergenic Kr-h2 +,CG9154 - chr2L 6070965 intergenic Kr-h2 +,CG9154 - chr2L 6071019 5` UTR Kr-h2 + chr2L_4_6070001 chr2L_6070001 RAL-426 167 chr2L 6093693 6093720 chr2L 6093774 6093804 4 84 2.0 1.0 1.5 1.6 111 chr2L 6093693 exon,3` UTR Kr-h1 +,CG45075 + chr2L 6093748 intron,intron Kr-h1 +,CG45075 + chr2L 6093804 exon,3` UTR Kr-h1 +,CG45075 + chr2L_4_6090001 chr2L_6090001 RAL-426 168 chr2L 6099053 6099084 chr2L 6099601 6099632 5 548 27.5 18.5 23.0 0.2 579 chr2L 6099053 intergenic CG9175 - chr2L 6099342 intergenic CG9175 - chr2L 6099632 intergenic not near genes chr2L_5_6095001 chr2L_6095001 RAL-426 169 chr2L 6103223 6103247 chr2L 6103298 6103344 5 92 7.0 8.5 7.8 0.6 121 chr2L 6103223 intron stai + chr2L 6103284 intron stai + chr2L 6103344 intron stai + chr2L_5_6100001 chr2L_6100001 RAL-426 170 chr2L 6106225 6106235 chr2L 6106335 6106345 5 110 3.0 3.5 3.2 1.2 120 chr2L 6106225 intron stai + chr2L 6106285 intron stai + chr2L 6106345 intron stai + chr2L_5_6105001 chr2L_6105001 RAL-426 171 chr2L 6251145 6251178 chr2L 6251534 6251565 8 388 15.5 15.0 15.2 0.5 420 chr2L 6251145 intergenic not near genes chr2L 6251355 intergenic not near genes chr2L 6251565 intergenic not near genes chr2L_8_6250001 chr2L_6250001 RAL-426 172 chr2L 6268943 6268980 chr2L 6269087 6269123 6 144 5.5 6.5 6.0 0.9 180 chr2L 6268943 intron Ddr + chr2L 6269033 intron Ddr + chr2L 6269123 intron Ddr + chr2L_6_6265001 chr2L_6265001 RAL-426 173 chr2L 6283923 6283968 chr2L 6284053 6284099 7 128 1.5 3.5 2.5 2.0 176 chr2L 6283923 intron Ddr + chr2L 6284011 intron Ddr + chr2L 6284099 intron Ddr + chr2L_7_6280001 chr2L_6280001 RAL-426 174 chr2L 6300561 6300571 chr2L 6300656 6300673 4 97 16.5 11.5 14.0 0.3 112 chr2L 6300561 intron Ddr + chr2L 6300617 intron Ddr + chr2L 6300673 intron Ddr + chr2L_4_6300001 chr2L_6300001 RAL-426 175 chr2L 6322457 6322504 chr2L 6322573 6322619 10 116 6.0 8.5 7.2 1.2 162 chr2L 6322457 3` UTR Ddr + chr2L 6322538 3` UTR Ddr + chr2L 6322619 3` UTR Ddr + chr2L_10_6320001 chr2L_6320001 RAL-426 176 chr2L 6343670 6343687 chr2L 6343964 6343986 6 295 28.0 27.0 27.5 0.2 316 chr2L 6343670 intron Cpr + chr2L 6343828 intron Cpr + chr2L 6343986 intron Cpr + chr2L_6_6340001 chr2L_6340001 RAL-426 177 chr2L 6363131 6363183 chr2L 6366073 6366107 Burdock 11 2933 3.5 2.5 3.0 2.8 2976 chr2L 6363131 intergenic not near genes chr2L 6364619 intergenic not near genes chr2L 6366107 intergenic not near genes chr2L_11_6360001 chr2L_6360001 RAL-426 178 chr2L 6426835 6426864 chr2L 6445113 6445144 roo 4 18280 6.5 3.0 4.8 0.7 18309 chr2L 6426835 3` UTR CG9527 - chr2L 6435990 intron CG9527 - chr2L 6445144 exon CG9527 - chr2L_4_6435001 chr2L_6435001 RAL-426 179 chr2L 6537130 6537164 chr2L 6537228 6537262 6 97 13.0 13.5 13.2 0.4 132 chr2L 6537130 intron eya - chr2L 6537196 intron eya - chr2L 6537262 intron eya - chr2L_6_6535001 chr2L_6535001 RAL-426 180 chr2L 6544350 6544389 chr2L 6544462 6544501 6 112 3.0 2.5 2.8 1.6 151 chr2L 6544350 intron eya - chr2L 6544426 intron eya - chr2L 6544501 intron eya - chr2L_6_6540001 chr2L_6540001 RAL-426 181 chr2L 6564828 6564850 chr2L 6564937 6564945 4 108 12.0 13.0 12.5 0.3 117 chr2L 6564828 3` UTR CG13766 - chr2L 6564886 3` UTR CG13766 - chr2L 6564945 3` UTR CG13766 - chr2L_4_6560001 chr2L_6560001 RAL-426 182 chr2L 6640894 6640937 chr2L 6641006 6641052 6 109 11.5 16.5 14.0 0.4 158 chr2L 6640894 exon CG31635 - chr2L 6640973 intron CG31635 - chr2L 6641052 intron CG31635 - chr2L_6_6640001 chr2L_6640001 RAL-426 183 chr2L 6677649 6677682 chr2L 6677740 6677785 9 101 5.5 7.0 6.2 1.2 136 chr2L 6677649 intergenic CG11329 -,Nhe3 - chr2L 6677717 intergenic CG11329 -,Nhe3 - chr2L 6677785 intergenic Nhe3 -,CG11329 - chr2L_9_6675001 chr2L_6675001 RAL-426 184 chr2L 6702510 6702522 chr2L 6702615 6702615 4 102 13.0 6.5 9.8 0.4 105 chr2L 6702510 intron Tsp - chr2L 6702562 intron Tsp - chr2L 6702615 intron Tsp - chr2L_4_6700001 chr2L_6700001 RAL-426 185 chr2L 6715747 6715773 chr2L 6715850 6715877 4 104 6.5 11.0 8.8 0.4 130 chr2L 6715747 intron AkhR - chr2L 6715812 intron AkhR - chr2L 6715877 intron AkhR - chr2L_4_6715001 chr2L_6715001 RAL-426 186 chr2L 6740743 6740758 chr2L 6740848 6740865 9 105 0.5 7.5 4.0 1.8 122 chr2L 6740743 intergenic not near genes chr2L 6740804 intergenic not near genes chr2L 6740865 intergenic not near genes chr2L_9_6740001 chr2L_6740001 RAL-426 187 chr2L 6839709 6839724 chr2L 6839822 6839834 4 112 9.0 4.5 6.8 0.5 125 chr2L 6839709 intergenic not near genes chr2L 6839772 intergenic not near genes chr2L 6839834 intergenic not near genes chr2L_4_6835001 chr2L_6835001 RAL-426 188 chr2L 6850396 6850400 chr2L 6850489 6850502 5 100 3.5 6.0 4.8 0.9 106 chr2L 6850396 intergenic not near genes chr2L 6850449 intergenic not near genes chr2L 6850502 intergenic not near genes chr2L_5_6850001 chr2L_6850001 RAL-426 189 chr2L 6868098 6868140 chr2L 6868218 6868238 10 111 15.0 17.5 16.2 0.6 140 chr2L 6868098 intron Nha1 - chr2L 6868168 intron Nha1 - chr2L 6868238 intron Nha1 - chr2L_10_6865001 chr2L_6865001 RAL-426 190 chr2L 6871560 6871607 chr2L 6871670 6871712 6 105 7.0 6.5 6.8 0.8 152 chr2L 6871560 intron CR44915 - chr2L 6871636 intron CR44915 - chr2L 6871712 intron CR44915 - chr2L_6_6870001 chr2L_6870001 RAL-426 191 chr2L 6950143 6950176 chr2L 6950368 6950398 6 224 8.5 4.0 6.2 0.8 255 chr2L 6950143 5` UTR Gas41 - chr2L 6950270 intergenic Gas41 -,SA + chr2L 6950398 intergenic SA +,Gas41 - chr2L_6_6950001 chr2L_6950001 RAL-426 192 chr2L 7000362 7000394 chr2L 7000450 7000485 5 93 10.5 12.5 11.5 0.4 123 chr2L 7000362 intron uif - chr2L 7000424 intron uif - chr2L 7000485 intron uif - chr2L_5_7000001 chr2L_7000001 RAL-426 193 chr2L 7095590 7095617 chr2L 7095699 7095727 6 110 10.5 8.0 9.2 0.6 137 chr2L 7095590 intergenic not near genes chr2L 7095658 intergenic not near genes chr2L 7095727 intergenic not near genes chr2L_6_7095001 chr2L_7095001 RAL-426 194 chr2L 7122853 7122880 chr2L 7122951 7122980 4 99 2.5 8.5 5.5 0.6 127 chr2L 7122853 intron Pvf3 - chr2L 7122916 intron Pvf3 - chr2L 7122980 intron Pvf3 - chr2L_4_7120001 chr2L_7120001 RAL-426 195 chr2L 7143149 7143185 chr2L 7143250 7143285 6 101 6.0 6.5 6.2 0.8 136 chr2L 7143149 intron,5` UTR Pvf3 -,CR44612 + chr2L 7143217 intron,5` UTR Pvf3 -,CR44612 + chr2L 7143285 intron,5` UTR Pvf3 -,CR44612 + chr2L_6_7140001 chr2L_7140001 RAL-426 196 chr2L 7164553 7164589 chr2L 7164691 7164727 10 138 4.0 6.5 5.2 1.6 174 chr2L 7164553 intergenic not near genes chr2L 7164640 intergenic not near genes chr2L 7164727 intergenic not near genes chr2L_10_7160001 chr2L_7160001 RAL-426 197 chr2L 7165764 7165810 chr2L 7165863 7165911 7 98 14.5 12.0 13.2 0.5 147 chr2L 7165764 intergenic not near genes chr2L 7165838 intergenic not near genes chr2L 7165911 intergenic not near genes chr2L_7_7165001 chr2L_7165001 RAL-426 198 chr2L 7200995 7201031 chr2L 7201096 7201132 11 100 8.5 11.5 10.0 1.0 137 chr2L 7200995 intron CG4502 - chr2L 7201064 intron CG4502 - chr2L 7201132 intron CG4502 - chr2L_11_7200001 chr2L_7200001 RAL-426 199 chr2L 7260682 7260709 chr2L 7260798 7260811 4 103 15.0 11.5 13.2 0.3 129 chr2L 7260682 intron Wnt4 - chr2L 7260746 intron Wnt4 - chr2L 7260811 intron Wnt4 - chr2L_4_7260001 chr2L_7260001 RAL-426 200 chr2L 7272988 7273033 chr2L 7273082 7273129 14 94 13.0 13.0 13.0 1.0 141 chr2L 7272988 intron Wnt4 - chr2L 7273058 intron Wnt4 - chr2L 7273129 intron Wnt4 - chr2L_14_7270001 chr2L_7270001 RAL-426 201 chr2L 7295981 7296020 chr2L 7296136 7296179 6 159 15.0 12.5 13.8 0.4 198 chr2L 7295981 intergenic not near genes chr2L 7296080 intergenic not near genes chr2L 7296179 intergenic not near genes chr2L_6_7295001 chr2L_7295001 RAL-426 202 chr2L 7326472 7326504 chr2L 7326610 7326641 4 137 2.0 2.5 2.2 1.2 169 chr2L 7326472 intergenic not near genes chr2L 7326556 intergenic not near genes chr2L 7326641 intergenic not near genes chr2L_4_7325001 chr2L_7325001 RAL-426 203 chr2L 7331659 7331704 chr2L 7331775 7331818 6 111 12.5 10.0 11.2 0.5 159 chr2L 7331659 intergenic not near genes chr2L 7331738 intergenic not near genes chr2L 7331818 intergenic not near genes chr2L_6_7330001 chr2L_7330001 RAL-426 204 chr2L 7343319 7343359 chr2L 7350440 7350445 roo 8 7126 3.5 4.0 3.8 1.7 7126 chr2L 7343319 intron Wnt6 + chr2L 7346882 intron Wnt6 + chr2L 7350445 intron Wnt6 + chr2L_8_7345001 chr2L_7345001 RAL-426 205 chr2L 7358284 7358311 chr2L 7358382 7358409 5 98 8.5 9.0 8.8 0.5 125 chr2L 7358284 intergenic not near genes chr2L 7358346 intergenic not near genes chr2L 7358409 intergenic not near genes chr2L_5_7355001 chr2L_7355001 RAL-426 206 chr2L 7376140 7376153 chr2L 7376280 7376317 4 158 7.0 11.5 9.2 0.4 177 chr2L 7376140 intron Wnt10 + chr2L 7376228 intron Wnt10 + chr2L 7376317 intron Wnt10 + chr2L_4_7375001 chr2L_7375001 RAL-426 207 chr2L 7436185 7436217 chr2L 7436296 7436331 6 109 7.5 8.0 7.8 0.7 146 chr2L 7436185 intergenic not near genes chr2L 7436258 intergenic not near genes chr2L 7436331 intergenic not near genes chr2L_6_7435001 chr2L_7435001 RAL-426 208 chr2L 7449734 7449770 chr2L 7449830 7449867 5 96 3.0 3.0 3.0 1.2 133 chr2L 7449734 5` UTR santa-maria - chr2L 7449800 5` UTR santa-maria - chr2L 7449867 5` UTR santa-maria - chr2L_5_7445001 chr2L_7445001 RAL-426 209 chr2L 7502736 7502759 chr2L 7502815 7502855 7 85 10.5 15.0 12.8 0.5 119 chr2L 7502736 intron RapGAP1 - chr2L 7502796 intron RapGAP1 - chr2L 7502855 intron RapGAP1 - chr2L_7_7500001 chr2L_7500001 RAL-426 210 chr2L 7570949 7570989 chr2L 7571049 7571090 6 98 8.0 13.0 10.5 0.5 141 chr2L 7570949 intron RapGAP1 - chr2L 7571020 intron RapGAP1 - chr2L 7571090 intron RapGAP1 - chr2L_6_7570001 chr2L_7570001 RAL-426 211 chr2L 7579871 7579918 chr2L 7579972 7580020 8 95 13.0 14.0 13.5 0.6 149 chr2L 7579871 intergenic not near genes chr2L 7579946 intergenic not near genes chr2L 7580020 intergenic not near genes chr2L_8_7575001 chr2L_7575001 RAL-426 212 chr2L 7621817 7621820 chr2L 7621929 7621932 4 112 7.0 11.0 9.0 0.4 115 chr2L 7621817 intergenic not near genes chr2L 7621874 intergenic not near genes chr2L 7621932 intergenic not near genes chr2L_4_7620001 chr2L_7620001 RAL-426 213 chr2L 7658222 7658270 chr2L 7658321 7658369 8 95 11.0 14.0 12.5 0.6 147 chr2L 7658222 intron Slob - chr2L 7658296 intron Slob - chr2L 7658369 intron Slob - chr2L_8_7655001 chr2L_7655001 RAL-426 214 chr2L 7664033 7664055 chr2L 7664150 7664172 5 117 8.0 2.0 5.0 0.8 139 chr2L 7664033 intron Slob - chr2L 7664102 intron Slob - chr2L 7664172 intron Slob - chr2L_5_7660001 chr2L_7660001 RAL-426 215 chr2L 7685504 7685524 chr2L 7685581 7685605 5 89 7.0 13.0 10.0 0.5 101 chr2L 7685504 intron Myo28B1 + chr2L 7685554 intron Myo28B1 + chr2L 7685605 intron Myo28B1 + chr2L_5_7685001 chr2L_7685001 RAL-426 216 chr2L 7867550 7867602 chr2L 7867664 7867716 9 114 2.5 1.0 1.8 3.2 166 chr2L 7867550 intron Proc - chr2L 7867633 intron Proc - chr2L 7867716 intron Proc - chr2L_9_7865001 chr2L_7865001 RAL-426 217 chr2L 7912174 7912215 chr2L 7912270 7912311 11 95 12.5 10.5 11.5 0.9 137 chr2L 7912174 intron Snoo - chr2L 7912242 intron Snoo - chr2L 7912311 intron Snoo - chr2L_11_7910001 chr2L_7910001 RAL-426 218 chr2L 7922723 7922769 chr2L 7922824 7922869 7 101 13.5 14.0 13.8 0.5 146 chr2L 7922723 intron Snoo - chr2L 7922796 intron Snoo - chr2L 7922869 intron Snoo - chr2L_7_7920001 chr2L_7920001 RAL-426 219 chr2L 7938078 7938104 chr2L 7938175 7938196 9 95 8.5 10.0 9.2 0.9 118 chr2L 7938078 intron Snoo - chr2L 7938137 intron Snoo - chr2L 7938196 intron Snoo - chr2L_9_7935001 chr2L_7935001 RAL-426 220 chr2L 7959020 7959055 chr2L 7960451 7960485 pogo 8 1428 7.5 7.0 7.2 1.0 1465 chr2L 7959020 intron Snoo - chr2L 7959752 intron Snoo - chr2L 7960485 intron Snoo - chr2L_8_7955001 chr2L_7955001 RAL-426 221 chr2L 7977073 7977109 chr2L 7984065 7984083 297 7 6990 4.0 2.0 3.0 1.8 7010 chr2L 7977073 intron Snoo - chr2L 7980578 intron Snoo - chr2L 7984083 intron,5` UTR Snoo -,CG7231 + chr2L_7_7980001 chr2L_7980001 RAL-426 222 chr2L 7984941 7984966 chr2L 7985089 7985114 5 146 7.5 11.0 9.2 0.5 173 chr2L 7984941 intron CG7231 + chr2L 7985028 intron CG7231 + chr2L 7985114 intron CG7231 + chr2L_5_7985001 chr2L_7985001 RAL-426 223 chr2L 8003038 8003055 chr2L 8003140 8003154 5 101 0.5 4.0 2.2 1.6 116 chr2L 8003038 intron Wwox - chr2L 8003096 intron Wwox - chr2L 8003154 intron Wwox - chr2L_5_8000001 chr2L_8000001 RAL-426 224 chr2L 8044081 8044121 chr2L 8044180 8044220 6 96 13.5 12.0 12.8 0.4 139 chr2L 8044081 intron CG7466 + chr2L 8044150 intron CG7466 + chr2L 8044220 intron CG7466 + chr2L_6_8040001 chr2L_8040001 RAL-426 225 chr2L 8128013 8128057 chr2L 8128115 8128120 9 95 17.0 19.0 18.0 0.5 107 chr2L 8128013 intron CG8668 + chr2L 8128066 intron CG8668 + chr2L 8128120 intron CG8668 + chr2L_9_8125001 chr2L_8125001 RAL-426 226 chr2L 8166024 8166057 chr2L 8166134 8166167 6 102 5.5 6.0 5.8 0.9 143 chr2L 8166024 intron Piezo + chr2L 8166096 intron Piezo + chr2L 8166167 intron Piezo + chr2L_6_8165001 chr2L_8165001 RAL-426 227 chr2L 8167125 8167175 chr2L 8167236 8167247 10 100 6.0 12.0 9.0 1.0 122 chr2L 8167125 intron Piezo + chr2L 8167186 intron Piezo + chr2L 8167247 intron Piezo + chr2L_10_8165001 chr2L_8165001 RAL-426 228 chr2L 8171274 8171301 chr2L 8171361 8171402 7 97 0.0 3.0 1.5 2.8 128 chr2L 8171274 intron Piezo + chr2L 8171338 intron Piezo + chr2L 8171402 intron Piezo + chr2L_7_8170001 chr2L_8170001 RAL-426 229 chr2L 8286274 8286321 chr2L 8286381 8286414 6 104 6.0 9.0 7.5 0.7 140 chr2L 8286274 intron Btk29A - chr2L 8286344 intron Btk29A - chr2L 8286414 intron Btk29A - chr2L_6_8285001 chr2L_8285001 RAL-426 230 chr2L 8334434 8334481 chr2L 8334533 8334579 7 98 13.0 13.5 13.2 0.5 145 chr2L 8334434 intergenic not near genes chr2L 8334506 intergenic not near genes chr2L 8334579 intergenic not near genes chr2L_7_8330001 chr2L_8330001 RAL-426 231 chr2L 8336926 8336941 chr2L 8337025 8337038 7 99 1.5 3.5 2.5 2.0 112 chr2L 8336926 intergenic not near genes chr2L 8336982 intergenic not near genes chr2L 8337038 intergenic not near genes chr2L_7_8335001 chr2L_8335001 RAL-426 232 chr2L 8452406 8452447 chr2L 8461592 8461635 roo 12 9182 3.0 7.0 5.0 2.0 9229 chr2L 8452406 intron fu12 - chr2L 8457020 intron fu12 - chr2L 8461635 intron fu12 - chr2L_12_8455001 chr2L_8455001 RAL-426 233 chr2L 8503589 8503620 chr2L 8503692 8503723 5 102 4.5 9.5 7.0 0.6 134 chr2L 8503589 intron Dh31 - chr2L 8503656 intron Dh31 - chr2L 8503723 intron Dh31 - chr2L_5_8500001 chr2L_8500001 RAL-426 234 chr2L 8525167 8525201 chr2L 8525264 8525300 4 95 8.0 2.0 5.0 0.7 133 chr2L 8525167 3` UTR,3` UTR,3` UTR Acer +,lmgA -,lmgB - chr2L 8525234 3` UTR,3` UTR,3` UTR Acer +,lmgA -,lmgB - chr2L 8525300 3` UTR,3` UTR,3` UTR Acer +,lmgA -,lmgB - chr2L_4_8525001 chr2L_8525001 RAL-426 235 chr2L 8578452 8578452 chr2L 16071771 16071772 4 7493319 20.5 21.0 20.8 0.2 7493320 chr2L 8578452 intron Sema-1a + chr2L 12325112 intergenic not near genes chr2L 16071772 intron beat-Ia + chr2L_4_12325001 chr2L_12325001 RAL-426 236 chr2L 8594451 8594460 chr2L 8601525 8601534 297 4 7073 5.5 3.5 4.5 0.7 7083 chr2L 8594451 intron,3` UTR Sema-1a +,CR43855 - chr2L 8597992 intron Sema-1a + chr2L 8601534 intron Sema-1a + chr2L_4_8595001 chr2L_8595001 RAL-426 237 chr2L 8594465 8594491 chr2L 8601520 8601564 297 6 7070 2.0 2.5 2.2 1.9 7099 chr2L 8594465 intron,3` UTR Sema-1a +,CR43855 - chr2L 8598014 intron Sema-1a + chr2L 8601564 intron Sema-1a + chr2L_6_8595001 chr2L_8595001 RAL-426 238 chr2L 8612842 8612867 chr2L 8612939 8612962 8 96 5.5 7.5 6.5 1.1 120 chr2L 8612842 intron Sema-1a + chr2L 8612902 intron Sema-1a + chr2L 8612962 intron Sema-1a + chr2L_8_8610001 chr2L_8610001 RAL-426 239 chr2L 8632864 8632893 chr2L 8632957 8632997 8 105 13.0 17.5 15.2 0.5 133 chr2L 8632864 intron Sema-1a + chr2L 8632930 intron Sema-1a + chr2L 8632997 intron Sema-1a + chr2L_8_8630001 chr2L_8630001 RAL-426 240 chr2L 8689683 8689733 chr2L 8689797 8689848 11 112 10.0 14.5 12.2 0.8 165 chr2L 8689683 intron Hnf4 - chr2L 8689766 intron Hnf4 - chr2L 8689848 exon Hnf4 - chr2L_11_8685001 chr2L_8685001 RAL-426 241 chr2L 8723096 8723111 chr2L 8731492 8731506 Tirant 4 8396 4.0 1.5 2.8 1.1 8410 chr2L 8723096 intron raw - chr2L 8727301 intron raw - chr2L 8731506 intron raw - chr2L_4_8725001 chr2L_8725001 RAL-426 242 chr2L 8723116 8723138 chr2L 8731491 8731528 Tirant 11 8393 2.5 1.5 2.0 3.7 8412 chr2L 8723116 intron raw - chr2L 8727322 intron raw - chr2L 8731528 intron raw - chr2L_11_8725001 chr2L_8725001 RAL-426 243 chr2L 8794992 8795026 chr2L 8795100 8795135 5 105 8.0 6.0 7.0 0.6 143 chr2L 8794992 intergenic not near genes chr2L 8795064 intergenic not near genes chr2L 8795135 intergenic not near genes chr2L_5_8795001 chr2L_8795001 RAL-426 244 chr2L 8874425 8874455 chr2L 8874521 8874522 4 87 9.5 6.0 7.8 0.5 97 chr2L 8874425 intergenic not near genes chr2L 8874474 intergenic not near genes chr2L 8874522 intergenic not near genes chr2L_4_8870001 chr2L_8870001 RAL-426 245 chr2L 8891856 8891904 chr2L 8891954 8892003 4 99 3.0 0.0 1.5 1.6 147 chr2L 8891856 3` UTR CG42713 + chr2L 8891930 3` UTR CG42713 + chr2L 8892003 3` UTR CG42713 + chr2L_4_8890001 chr2L_8890001 RAL-426 246 chr2L 8902440 8902476 chr2L 8902607 8902643 4 167 6.5 14.5 10.5 0.3 203 chr2L 8902440 intron CG34398 + chr2L 8902542 intron CG34398 + chr2L 8902643 intron CG34398 + chr2L_4_8900001 chr2L_8900001 RAL-426 247 chr2L 8939647 8939692 chr2L 8939747 8939792 5 100 5.5 7.5 6.5 0.7 145 chr2L 8939647 3` UTR Tsp29Fb + chr2L 8939720 3` UTR Tsp29Fb + chr2L 8939792 3` UTR CG9510 - chr2L_5_8935001 chr2L_8935001 RAL-426 248 chr2L 8965367 8965380 chr2L 8965464 8965477 4 96 0.5 2.5 1.5 1.6 110 chr2L 8965367 exon CG32984 + chr2L 8965422 intron CG32984 + chr2L 8965477 exon CG32984 + chr2L_4_8965001 chr2L_8965001 RAL-426 249 chr2L 8967108 8967138 chr2L 8967226 8967256 5 118 4.0 10.0 7.0 0.6 148 chr2L 8967108 intergenic CG32984 +,CG18088 + chr2L 8967182 intergenic CG32984 +,CG18088 + chr2L 8967256 intergenic CG32984 +,CG18088 + chr2L_5_8965001 chr2L_8965001 RAL-426 250 chr2L 8997260 8997309 chr2L 8997604 8997653 5 344 28.0 22.0 25.0 0.2 393 chr2L 8997260 exon alien - chr2L 8997456 intergenic alien -,CG18661 + chr2L 8997653 5` UTR CG18661 + chr2L_5_8995001 chr2L_8995001 RAL-426 251 chr2L 9000260 9000311 chr2L 9007790 9007841 roo 10 7530 3.0 3.5 3.2 2.4 7581 chr2L 9000260 intergenic Try29F + chr2L 9004050 intergenic not near genes chr2L 9007841 intergenic not near genes chr2L_10_9000001 chr2L_9000001 RAL-426 252 chr2L 9040014 9040054 chr2L 9040120 9040161 8 105 4.0 2.5 3.2 1.9 147 chr2L 9040014 intergenic not near genes chr2L 9040088 intergenic not near genes chr2L 9040161 intergenic not near genes chr2L_8_9040001 chr2L_9040001 RAL-426 253 chr2L 9053393 9053429 chr2L 9053643 9053680 6 253 2.0 4.5 3.2 1.4 287 chr2L 9053393 exon CG31708 - chr2L 9053536 intron CG31708 - chr2L 9053680 intron CG31708 - chr2L_6_9050001 chr2L_9050001 RAL-426 254 chr2L 9116581 9116629 chr2L 9116710 9116758 9 129 11.5 9.0 10.2 0.8 177 chr2L 9116581 intergenic not near genes chr2L 9116670 intergenic not near genes chr2L 9116758 intergenic not near genes chr2L_9_9115001 chr2L_9115001 RAL-426 255 chr2L 9128561 9128602 chr2L 9128679 9128720 8 117 9.5 12.5 11.0 0.7 159 chr2L 9128561 intron CG32982 + chr2L 9128640 intron CG32982 + chr2L 9128720 intron CG32982 + chr2L_8_9125001 chr2L_9125001 RAL-426 256 chr2L 9158775 9158792 chr2L 9158892 9158908 5 116 9.5 0.0 4.8 0.9 133 chr2L 9158775 intron CG32982 + chr2L 9158842 intron CG32982 + chr2L 9158908 intron CG32982 + chr2L_5_9155001 chr2L_9155001 RAL-426 257 chr2L 9173070 9173088 chr2L 9173158 9173182 4 94 4.0 5.0 4.5 0.7 112 chr2L 9173070 intron tai + chr2L 9173126 intron tai + chr2L 9173182 intron tai + chr2L_4_9170001 chr2L_9170001 RAL-426 258 chr2L 9195858 9195873 chr2L 9195961 9195976 4 103 9.5 7.0 8.2 0.4 118 chr2L 9195858 intron tai + chr2L 9195917 intron tai + chr2L 9195976 intron tai + chr2L_4_9195001 chr2L_9195001 RAL-426 259 chr2L 9259228 9259243 chr2L 9259307 9259307 5 78 2.0 2.5 2.2 1.6 79 chr2L 9259228 intron Ggamma30A + chr2L 9259268 intron Ggamma30A + chr2L 9259307 intron Ggamma30A + chr2L_5_9255001 chr2L_9255001 RAL-426 260 chr2L 9264326 9264380 chr2L 9264446 9264499 16 119 3.5 3.5 3.5 3.6 173 chr2L 9264326 intron Ggamma30A + chr2L 9264412 intron Ggamma30A + chr2L 9264499 intron Ggamma30A + chr2L_16_9260001 chr2L_9260001 RAL-426 261 chr2L 9270738 9270761 chr2L 9270840 9270870 4 106 14.5 14.0 14.2 0.3 132 chr2L 9270738 intron Ggamma30A + chr2L 9270804 intron Ggamma30A + chr2L 9270870 intron Ggamma30A + chr2L_4_9270001 chr2L_9270001 RAL-426 262 chr2L 9279972 9280014 chr2L 9280084 9280126 6 113 1.0 2.0 1.5 2.4 154 chr2L 9279972 intron Ggamma30A + chr2L 9280049 intron Ggamma30A + chr2L 9280126 intron Ggamma30A + chr2L_6_9280001 chr2L_9280001 RAL-426 263 chr2L 9297359 9297403 chr2L 9297455 9297500 6 96 12.5 11.0 11.8 0.5 141 chr2L 9297359 3` UTR Ggamma30A + chr2L 9297430 3` UTR Ggamma30A + chr2L 9297500 3` UTR Ggamma30A + chr2L_6_9295001 chr2L_9295001 RAL-426 264 chr2L 9303356 9303488 chr2L 9303479 9303585 13 103 10.0 6.5 8.2 1.4 229 chr2L 9303356 intergenic not near genes chr2L 9303470 intergenic not near genes chr2L 9303585 intergenic not near genes chr2L_13_9300001 chr2L_9300001 RAL-426 265 chr2L 9304485 9304519 chr2L 9304584 9304618 5 95 9.5 12.0 10.8 0.4 133 chr2L 9304485 3` UTR CR42844 - chr2L 9304552 3` UTR CR42844 - chr2L 9304618 3` UTR CR42844 - chr2L_5_9300001 chr2L_9300001 RAL-426 266 chr2L 9355811 9355839 chr2L 9356449 9356466 6 640 11.0 14.0 12.5 0.4 655 chr2L 9355811 intergenic not near genes chr2L 9356138 intergenic not near genes chr2L 9356466 intergenic not near genes chr2L_6_9355001 chr2L_9355001 RAL-426 267 chr2L 9380223 9380254 chr2L 9380338 9380369 7 114 4.0 4.5 4.2 1.3 146 chr2L 9380223 exon Shawl - chr2L 9380296 intron Shawl - chr2L 9380369 intron Shawl - chr2L_7_9380001 chr2L_9380001 RAL-426 268 chr2L 9383058 9383095 chr2L 9383175 9383212 4 117 7.5 9.5 8.5 0.4 154 chr2L 9383058 intron Shawl - chr2L 9383135 intron Shawl - chr2L 9383212 intron Shawl - chr2L_4_9380001 chr2L_9380001 RAL-426 269 chr2L 9391674 9391697 chr2L 9391756 9391803 10 96 13.0 13.5 13.2 0.7 129 chr2L 9391674 intron Shawl - chr2L 9391738 intron Shawl - chr2L 9391803 intron Shawl - chr2L_10_9390001 chr2L_9390001 RAL-426 270 chr2L 9393480 9393527 chr2L 9396467 9396514 jockey 13 2985 4.5 6.0 5.2 2.1 3034 chr2L 9393480 intron Shawl - chr2L 9394997 intron Shawl - chr2L 9396514 intron Shawl - chr2L_13_9390001 chr2L_9390001 RAL-426 271 chr2L 9428508 9428531 chr2L 9428607 9428630 8 99 1.5 0.5 1.0 4.0 122 chr2L 9428508 3` UTR CG42847 + chr2L 9428569 3` UTR CG42847 + chr2L 9428630 3` UTR CG42847 + chr2L_8_9425001 chr2L_9425001 RAL-426 272 chr2L 9456919 9456955 chr2L 9457015 9457048 7 97 12.0 14.0 13.0 0.5 129 chr2L 9456919 intron numb + chr2L 9456984 intron numb + chr2L 9457048 intron numb + chr2L_7_9455001 chr2L_9455001 RAL-426 273 chr2L 9496920 9496946 chr2L 9497039 9497076 6 119 4.5 8.5 6.5 0.8 156 chr2L 9496920 intron CG33298 + chr2L 9496998 intron CG33298 + chr2L 9497076 intron CG33298 + chr2L_6_9495001 chr2L_9495001 RAL-426 274 chr2L 9618884 9618916 chr2L 9618977 9619012 7 96 5.0 3.5 4.2 1.3 128 chr2L 9618884 intron GlcAT-S + chr2L 9618948 intron GlcAT-S + chr2L 9619012 intron GlcAT-S + chr2L_7_9615001 chr2L_9615001 RAL-426 275 chr2L 9730959 9730997 chr2L 9731061 9731100 5 99 8.0 4.5 6.2 0.7 141 chr2L 9730959 intron Nckx30C - chr2L 9731030 intron Nckx30C - chr2L 9731100 intron Nckx30C - chr2L_5_9730001 chr2L_9730001 RAL-426 276 chr2L 9756755 9756788 chr2L 9756883 9756917 6 129 15.5 9.0 12.2 0.5 162 chr2L 9756755 intergenic not near genes chr2L 9756836 intergenic not near genes chr2L 9756917 intergenic not near genes chr2L_6_9755001 chr2L_9755001 RAL-426 277 chr2L 9770761 9770790 chr2L 9770872 9770898 1360 4 115 4.0 4.0 4.0 0.8 137 chr2L 9770761 intron ppk18 - chr2L 9770830 intron ppk18 - chr2L 9770898 exon ppk18 - chr2L_4_9770001 chr2L_9770001 RAL-426 278 chr2L 9817203 9817238 chr2L 9817309 9817336 4 101 6.5 11.5 9.0 0.4 133 chr2L 9817203 intron nAChRalpha6 - chr2L 9817270 intron nAChRalpha6 - chr2L 9817336 intron nAChRalpha6 - chr2L_4_9815001 chr2L_9815001 RAL-426 279 chr2L 9873126 9873154 chr2L 9873407 9873447 5 288 15.0 10.0 12.5 0.4 321 chr2L 9873126 intron nAChRalpha6 - chr2L 9873286 intron nAChRalpha6 - chr2L 9873447 intron nAChRalpha6 - chr2L_5_9870001 chr2L_9870001 RAL-426 280 chr2L 9883144 9883158 chr2L 9883260 9883274 7 115 4.5 1.5 3.0 1.8 130 chr2L 9883144 intron nAChRalpha6 - chr2L 9883209 intron nAChRalpha6 - chr2L 9883274 intron nAChRalpha6 - chr2L_7_9880001 chr2L_9880001 RAL-426 281 chr2L 9973708 9973756 chr2L 9980845 9980856 HMS-Beagle 10 7127 4.0 4.5 4.2 1.9 7148 chr2L 9973708 intergenic not near genes chr2L 9977282 intergenic not near genes chr2L 9980856 intergenic not near genes chr2L_10_9975001 chr2L_9975001 RAL-426 282 chr2L 9982199 9982225 chr2L 9982309 9982324 7 114 0.0 7.0 3.5 1.6 125 chr2L 9982199 intergenic not near genes chr2L 9982262 intergenic not near genes chr2L 9982324 intergenic not near genes chr2L_7_9980001 chr2L_9980001 RAL-426 283 chr2L 10023064 10023089 chr2L 10023169 10023177 8 100 3.0 5.5 4.2 1.5 113 chr2L 10023064 intergenic not near genes chr2L 10023120 intergenic not near genes chr2L 10023177 intergenic not near genes chr2L_8_10020001 chr2L_10020001 RAL-426 284 chr2L 10045403 10045438 chr2L 10045499 10045500 8 92 3.0 6.5 4.8 1.4 97 chr2L 10045403 intergenic not near genes chr2L 10045452 intergenic not near genes chr2L 10045500 intergenic not near genes chr2L_8_10045001 chr2L_10045001 RAL-426 285 chr2L 10051713 10051753 chr2L 10051813 10051850 4 97 9.5 8.0 8.8 0.4 137 chr2L 10051713 5` UTR CR44874 + chr2L 10051782 5` UTR CR44874 + chr2L 10051850 5` UTR CR44874 + chr2L_4_10050001 chr2L_10050001 RAL-426 286 chr2L 10095626 10095663 chr2L 10095726 10095756 5 94 6.5 6.0 6.2 0.7 130 chr2L 10095626 intron CG44153 - chr2L 10095691 intron CG44153 - chr2L 10095756 intron CG44153 - chr2L_5_10095001 chr2L_10095001 RAL-426 287 chr2L 10105281 10105307 chr2L 10105355 10105403 6 89 2.5 3.5 3.0 1.5 122 chr2L 10105281 intron,intron CG44153 -,CG34109 + chr2L 10105342 intron,intron CG44153 -,CG34109 + chr2L 10105403 intron,intron CG44153 -,CG34109 + chr2L_6_10105001 chr2L_10105001 RAL-426 288 chr2L 10136232 10136269 chr2L 10136323 10136371 4 94 9.5 6.5 8.0 0.4 139 chr2L 10136232 intron CG44153 - chr2L 10136302 intron CG44153 - chr2L 10136371 intron CG44153 - chr2L_4_10135001 chr2L_10135001 RAL-426 289 chr2L 10138169 10138189 chr2L 10143435 10143453 Rt1c 11 5263 3.5 7.0 5.2 1.8 5284 chr2L 10138169 intron CG44153 - chr2L 10140811 intron CG44153 - chr2L 10143453 intron CG44153 - chr2L_11_10140001 chr2L_10140001 RAL-426 290 chr2L 10153181 10153230 chr2L 10153280 10153329 11 94 10.0 12.5 11.2 0.9 148 chr2L 10153181 intron,exon CG44153 -,CG4839 + chr2L 10153255 intron,intron CG44153 -,CG4839 + chr2L 10153329 intron,exon CG44153 -,CG4839 + chr2L_11_10150001 chr2L_10150001 RAL-426 291 chr2L 10176024 10176024 chr2L 16071771 16071771 5 5895747 26.5 21.0 23.8 0.2 5895747 chr2L 10176024 intron CG44153 - chr2L 13123898 intergenic not near genes chr2L 16071771 intron beat-Ia + chr2L_5_13120001 chr2L_13120001 RAL-426 292 chr2L 10480293 10480334 chr2L 10480390 10480421 6 91 17.0 11.0 14.0 0.4 128 chr2L 10480293 intron RluA-2 + chr2L 10480357 intron RluA-2 + chr2L 10480421 intron RluA-2 + chr2L_6_10480001 chr2L_10480001 RAL-426 293 chr2L 10515347 10515384 chr2L 10515460 10515493 7 112 11.0 10.5 10.8 0.6 146 chr2L 10515347 intron,intron CG45083 -,Fatp - chr2L 10515420 intron,intron CG45083 -,Fatp - chr2L 10515493 intron,intron CG45083 -,Fatp - chr2L_7_10515001 chr2L_10515001 RAL-426 294 chr2L 10524725 10524881 chr2L 10524848 10525009 7 126 5.0 3.5 4.2 1.3 284 chr2L 10524725 intergenic not near genes chr2L 10524867 intergenic not near genes chr2L 10525009 intergenic not near genes chr2L_7_10520001 chr2L_10520001 RAL-426 295 chr2L 10580685 10580822 chr2L 10580761 10580923 12 84 10.5 7.5 9.0 1.2 238 chr2L 10580685 intron Trim9 + chr2L 10580804 intron Trim9 + chr2L 10580923 intron Trim9 + chr2L_12_10580001 chr2L_10580001 RAL-426 296 chr2L 10592825 10592873 chr2L 10600507 10600555 opus 14 7676 0.5 5.5 3.0 3.5 7730 chr2L 10592825 intron Trim9 + chr2L 10596690 intron Trim9 + chr2L 10600555 intron Trim9 + chr2L_14_10595001 chr2L_10595001 RAL-426 297 chr2L 10634737 10634788 chr2L 10634834 10634886 4 99 7.0 5.5 6.2 0.6 149 chr2L 10634737 intron CG7329 - chr2L 10634812 intron CG7329 - chr2L 10634886 intron CG7329 - chr2L_4_10630001 chr2L_10630001 RAL-426 298 chr2L 10640623 10640668 chr2L 10640732 10640773 9 103 14.5 16.5 15.5 0.5 150 chr2L 10640623 exon CG31872 + chr2L 10640698 exon CG31872 + chr2L 10640773 exon CG31872 + chr2L_9_10640001 chr2L_10640001 RAL-426 299 chr2L 10647581 10647589 chr2L 10647725 10647733 4 144 15.5 31.5 23.5 0.2 152 chr2L 10647581 exon CG17097 + chr2L 10647657 exon CG17097 + chr2L 10647733 exon CG17097 + chr2L_4_10645001 chr2L_10645001 RAL-426 300 chr2L 10686161 10686173 chr2L 10686266 10686272 5 104 5.5 1.0 3.2 1.2 111 chr2L 10686161 3` UTR CG7296 - chr2L 10686216 3` UTR CG7296 - chr2L 10686272 3` UTR CG7296 - chr2L_5_10685001 chr2L_10685001 RAL-426 301 chr2L 10701713 10701733 chr2L 10701788 10701833 6 95 8.0 7.0 7.5 0.7 120 chr2L 10701713 intergenic Lip1 -,Lip2 - chr2L 10701773 intergenic Lip2 -,Lip1 - chr2L 10701833 intergenic Lip2 -,Lip1 - chr2L_6_10700001 chr2L_10700001 RAL-426 302 chr2L 10755547 10755601 chr2L 10755676 10755730 8 127 9.0 4.0 6.5 1.1 183 chr2L 10755547 intron CG17124 - chr2L 10755638 intron CG17124 - chr2L 10755730 intron CG17124 - chr2L_8_10755001 chr2L_10755001 RAL-426 303 chr2L 10803774 10803799 chr2L 10803878 10803904 4 105 3.0 5.5 4.2 0.8 130 chr2L 10803774 intergenic Nos - chr2L 10803839 intergenic Nos - chr2L 10803904 intergenic Nos - chr2L_4_10800001 chr2L_10800001 RAL-426 304 chr2L 10850130 10850171 chr2L 10850245 10850269 4 107 14.5 15.5 15.0 0.2 139 chr2L 10850130 5` UTR porin - chr2L 10850200 5` UTR,5` UTR porin -,CG43129 + chr2L 10850269 5` UTR,intron porin -,CG43129 + chr2L_4_10850001 chr2L_10850001 RAL-426 305 chr2L 10852157 10852178 chr2L 10852265 10852287 6 109 0.5 7.0 3.8 1.2 130 chr2L 10852157 intron CG43129 + chr2L 10852222 intron CG43129 + chr2L 10852287 intron CG43129 + chr2L_6_10850001 chr2L_10850001 RAL-426 306 chr2L 10862870 10862874 chr2L 10864463 10864491 Rt1c 7 1608 5.5 4.5 5.0 1.2 1621 chr2L 10862870 3` UTR CR43807 - chr2L 10863680 intron CR43807 - chr2L 10864491 3` UTR CR43807 - chr2L_7_10860001 chr2L_10860001 RAL-426 307 chr2L 10891472 10891504 chr2L 10891601 10891633 6 130 6.0 5.5 5.8 0.9 161 chr2L 10891472 intergenic not near genes chr2L 10891552 intergenic not near genes chr2L 10891633 intergenic not near genes chr2L_6_10890001 chr2L_10890001 RAL-426 308 chr2L 10912980 10913002 chr2L 10913079 10913097 6 97 5.5 8.5 7.0 0.8 117 chr2L 10912980 intergenic not near genes chr2L 10913038 intergenic not near genes chr2L 10913097 intergenic not near genes chr2L_6_10910001 chr2L_10910001 RAL-426 309 chr2L 10914781 10914833 chr2L 10914891 10914903 11 96 12.0 12.0 12.0 0.8 122 chr2L 10914781 intergenic not near genes chr2L 10914842 intergenic not near genes chr2L 10914903 intergenic not near genes chr2L_11_10910001 chr2L_10910001 RAL-426 310 chr2L 10939761 10939791 chr2L 10939855 10939882 7 95 16.0 15.0 15.5 0.4 121 chr2L 10939761 intron dpr2 - chr2L 10939822 intron dpr2 - chr2L 10939882 intron dpr2 - chr2L_7_10935001 chr2L_10935001 RAL-426 311 chr2L 10946951 10946976 chr2L 10956165 10956208 roo 17 9227 3.0 7.0 5.0 2.8 9257 chr2L 10946951 intron dpr2 - chr2L 10951580 intron dpr2 - chr2L 10956208 intron dpr2 - chr2L_17_10950001 chr2L_10950001 RAL-426 312 chr2L 11144547 11144559 chr2L 11144704 11144716 4 157 8.5 3.5 6.0 0.6 169 chr2L 11144547 intron Gyc32E - chr2L 11144632 intron,3` UTR Gyc32E -,CG31867 - chr2L 11144716 intron,3` UTR Gyc32E -,CG31867 - chr2L_4_11140001 chr2L_11140001 RAL-426 313 chr2L 11169469 11169483 chr2L 11169619 11169638 5 154 5.5 5.5 5.5 0.8 169 chr2L 11169469 intron Ca-beta - chr2L 11169554 intron Ca-beta - chr2L 11169638 intron Ca-beta - chr2L_5_11165001 chr2L_11165001 RAL-426 314 chr2L 11246753 11246774 chr2L 11246872 11246893 9 119 14.0 5.5 9.8 0.8 140 chr2L 11246753 intron ab + chr2L 11246823 intron ab + chr2L 11246893 intron ab + chr2L_9_11245001 chr2L_11245001 RAL-426 315 chr2L 11253318 11253367 chr2L 11253413 11253462 7 96 11.0 12.0 11.5 0.6 144 chr2L 11253318 intron ab + chr2L 11253390 intron ab + chr2L 11253462 intron ab + chr2L_7_11250001 chr2L_11250001 RAL-426 316 chr2L 11292359 11292408 chr2L 11292459 11292510 17 100 4.0 5.0 4.5 3.1 151 chr2L 11292359 intergenic not near genes chr2L 11292434 intergenic not near genes chr2L 11292510 intergenic not near genes chr2L_17_11290001 chr2L_11290001 RAL-426 317 chr2L 11298806 11298839 chr2L 11298903 11298937 5 96 6.5 6.0 6.2 0.7 131 chr2L 11298806 intergenic not near genes chr2L 11298872 intergenic not near genes chr2L 11298937 intergenic not near genes chr2L_5_11295001 chr2L_11295001 RAL-426 318 chr2L 11315251 11315272 chr2L 11317673 11317696 G2 4 2424 1.0 2.5 1.8 1.4 2445 chr2L 11315251 intergenic not near genes chr2L 11316474 intergenic not near genes chr2L 11317696 intergenic not near genes chr2L_4_11315001 chr2L_11315001 RAL-426 319 chr2L 11330195 11330224 chr2L 11330309 11330333 9 115 4.5 10.5 7.5 1.1 138 chr2L 11330195 intergenic not near genes chr2L 11330264 intergenic not near genes chr2L 11330333 intergenic not near genes chr2L_9_11330001 chr2L_11330001 RAL-426 320 chr2L 11399516 11399535 chr2L 11399612 11399619 4 90 1.0 0.0 0.5 2.7 103 chr2L 11399516 intergenic not near genes chr2L 11399568 intergenic not near genes chr2L 11399619 intergenic not near genes chr2L_4_11395001 chr2L_11395001 RAL-426 321 chr2L 11404775 11404800 chr2L 11404858 11404896 8 90 6.5 10.0 8.2 0.9 121 chr2L 11404775 intergenic not near genes chr2L 11404836 intergenic not near genes chr2L 11404896 intergenic not near genes chr2L_8_11400001 chr2L_11400001 RAL-426 322 chr2L 11413273 11413320 chr2L 11413416 11413463 5 143 16.0 12.0 14.0 0.3 190 chr2L 11413273 intergenic not near genes chr2L 11413368 intergenic not near genes chr2L 11413463 intergenic not near genes chr2L_5_11410001 chr2L_11410001 RAL-426 323 chr2L 11450103 11450151 chr2L 11450208 11450253 6 103 8.0 10.0 9.0 0.6 150 chr2L 11450103 intergenic not near genes chr2L 11450178 intergenic not near genes chr2L 11450253 intergenic not near genes chr2L_6_11450001 chr2L_11450001 RAL-426 324 chr2L 11458935 11458975 chr2L 11459065 11459110 7 134 6.5 3.0 4.8 1.2 175 chr2L 11458935 intergenic not near genes chr2L 11459022 intergenic not near genes chr2L 11459110 intergenic not near genes chr2L_7_11455001 chr2L_11455001 RAL-426 325 chr2L 11470860 11470899 chr2L 11470958 11470983 5 91 7.5 7.5 7.5 0.6 123 chr2L 11470860 intergenic not near genes chr2L 11470922 intergenic not near genes chr2L 11470983 intergenic not near genes chr2L_5_11470001 chr2L_11470001 RAL-426 326 chr2L 11540596 11540615 chr2L 11548018 11548037 Tabor 4 7422 2.5 2.5 2.5 1.1 7441 chr2L 11540596 intergenic not near genes chr2L 11544316 intergenic not near genes chr2L 11548037 intergenic not near genes chr2L_4_11540001 chr2L_11540001 RAL-426 327 chr2L 11563621 11563670 chr2L 11568845 11568894 copia 10 5220 4.5 5.0 4.8 1.7 5273 chr2L 11563621 intergenic not near genes chr2L 11566258 intergenic not near genes chr2L 11568894 intergenic not near genes chr2L_10_11565001 chr2L_11565001 RAL-426 328 chr2L 11585233 11585238 chr2L 11585324 11585334 6 95 1.5 7.0 4.2 1.2 101 chr2L 11585233 intron kek2 + chr2L 11585284 intron kek2 + chr2L 11585334 intron kek2 + chr2L_6_11585001 chr2L_11585001 RAL-426 329 chr2L 11629559 11629599 chr2L 11629674 11629713 9 115 8.5 9.0 8.8 0.9 154 chr2L 11629559 intergenic not near genes chr2L 11629636 intergenic not near genes chr2L 11629713 intergenic not near genes chr2L_9_11625001 chr2L_11625001 RAL-426 330 chr2L 11688745 11688789 chr2L 11688837 11688853 9 90 17.0 10.5 13.8 0.6 108 chr2L 11688745 intergenic not near genes chr2L 11688799 intergenic not near genes chr2L 11688853 intergenic not near genes chr2L_9_11685001 chr2L_11685001 RAL-426 331 chr2L 11713512 11713535 chr2L 11720976 11721008 blood 7 7480 3.0 4.5 3.8 1.5 7496 chr2L 11713512 intergenic not near genes chr2L 11717260 intergenic not near genes chr2L 11721008 intergenic CR44143 + chr2L_7_11715001 chr2L_11715001 RAL-426 332 chr2L 11752846 11752875 chr2L 11753156 11753183 6 307 6.5 10.0 8.2 0.7 337 chr2L 11752846 intergenic CG42470 - chr2L 11753014 3` UTR CG42470 - chr2L 11753183 3` UTR CG42470 - chr2L_6_11750001 chr2L_11750001 RAL-426 333 chr2L 11755725 11755756 chr2L 11755825 11755856 5 100 11.5 9.0 10.2 0.4 131 chr2L 11755725 intergenic not near genes chr2L 11755790 intergenic not near genes chr2L 11755856 intergenic not near genes chr2L_5_11755001 chr2L_11755001 RAL-426 334 chr2L 11820426 11820464 chr2L 11820525 11820563 5 100 5.5 6.5 6.0 0.7 137 chr2L 11820426 intron Pde1c - chr2L 11820494 intron Pde1c - chr2L 11820563 intron Pde1c - chr2L_5_11820001 chr2L_11820001 RAL-426 335 chr2L 11821449 11821485 chr2L 11821567 11821604 4 119 11.5 8.0 9.8 0.4 155 chr2L 11821449 intron Pde1c - chr2L 11821526 intron Pde1c - chr2L 11821604 intron Pde1c - chr2L_4_11820001 chr2L_11820001 RAL-426 336 chr2L 11826167 11826195 chr2L 11826267 11826298 4 94 7.0 5.0 6.0 0.6 131 chr2L 11826167 intron Pde1c - chr2L 11826232 intron Pde1c - chr2L 11826298 intron Pde1c - chr2L_4_11825001 chr2L_11825001 RAL-426 337 chr2L 11828434 11828468 chr2L 11828523 11828564 10 94 2.5 8.5 5.5 1.5 130 chr2L 11828434 intron,intron Pde1c -,esc - chr2L 11828499 intron,intron Pde1c -,esc - chr2L 11828564 intron,intron Pde1c -,esc - chr2L_10_11825001 chr2L_11825001 RAL-426 338 chr2L 11841328 11841392 chr2L 11841445 11841490 10 106 0.5 0.0 0.2 8.3 162 chr2L 11841328 intron Pde1c - chr2L 11841409 intron Pde1c - chr2L 11841490 intron Pde1c - chr2L_10_11840001 chr2L_11840001 RAL-426 339 chr2L 11892520 11892811 chr2L 11892634 11892899 15 107 12.0 2.0 7.0 1.9 379 chr2L 11892520 intron Pde1c - chr2L 11892710 intron Pde1c - chr2L 11892899 intron Pde1c - chr2L_15_11890001 chr2L_11890001 RAL-426 340 chr2L 11925594 11925620 chr2L 11925684 11925723 6 105 14.0 16.5 15.2 0.4 129 chr2L 11925594 5` UTR Pde1c - chr2L 11925658 5` UTR Pde1c - chr2L 11925723 5` UTR Pde1c - chr2L_6_11925001 chr2L_11925001 RAL-426 341 chr2L 11932152 11932190 chr2L 11932251 11932289 8 95 12.0 13.0 12.5 0.6 137 chr2L 11932152 intergenic not near genes chr2L 11932220 intergenic not near genes chr2L 11932289 intergenic not near genes chr2L_8_11930001 chr2L_11930001 RAL-426 342 chr2L 12092050 12092066 chr2L 12092114 12092147 8 87 13.5 12.5 13.0 0.6 97 chr2L 12092050 5` UTR,3` UTR Pex19 +,CR44594 - chr2L 12092098 5` UTR,3` UTR Pex19 +,CR44594 - chr2L 12092147 intron,3` UTR Pex19 +,CR44594 - chr2L_8_12090001 chr2L_12090001 RAL-426 343 chr2L 12121615 12121644 chr2L 12121728 12121732 6 105 9.0 7.5 8.2 0.7 117 chr2L 12121615 intron CG17211 + chr2L 12121674 intron CG17211 + chr2L 12121732 intron CG17211 + chr2L_6_12120001 chr2L_12120001 RAL-426 344 chr2L 12131463 12131494 chr2L 12131575 12131609 7 113 10.5 9.5 10.0 0.6 146 chr2L 12131463 intron rho-6 - chr2L 12131536 intron rho-6 - chr2L 12131609 intron rho-6 - chr2L_7_12130001 chr2L_12130001 RAL-426 345 chr2L 12239051 12239083 chr2L 12239159 12239181 6 106 9.5 11.5 10.5 0.5 130 chr2L 12239051 intron aret + chr2L 12239116 intron aret + chr2L 12239181 intron aret + chr2L_6_12235001 chr2L_12235001 RAL-426 346 chr2L 12299593 12299642 chr2L 12299690 12299713 7 93 3.0 2.0 2.5 2.0 120 chr2L 12299593 intron aret + chr2L 12299653 intron aret + chr2L 12299713 intron aret + chr2L_7_12295001 chr2L_12295001 RAL-426 347 chr2L 12305395 12305434 chr2L 12305503 12305542 6 105 9.5 8.0 8.8 0.6 147 chr2L 12305395 intron aret + chr2L 12305468 intron aret + chr2L 12305542 intron aret + chr2L_6_12305001 chr2L_12305001 RAL-426 348 chr2L 12366843 12366879 chr2L 12366949 12366985 6 106 7.5 5.0 6.2 0.8 142 chr2L 12366843 intron bru-2 + chr2L 12366914 intron bru-2 + chr2L 12366985 intron bru-2 + chr2L_6_12365001 chr2L_12365001 RAL-426 349 chr2L 12371725 12371735 chr2L 12372509 12372523 5 788 8.5 9.0 8.8 0.5 798 chr2L 12371725 intron bru-2 + chr2L 12372124 intron bru-2 + chr2L 12372523 intron bru-2 + chr2L_5_12370001 chr2L_12370001 RAL-426 350 chr2L 12408927 12408960 chr2L 12409038 12409052 6 106 13.5 14.5 14.0 0.4 125 chr2L 12408927 intron vir-1 - chr2L 12408990 intron vir-1 - chr2L 12409052 intron vir-1 - chr2L_6_12405001 chr2L_12405001 RAL-426 351 chr2L 12471134 12471140 chr2L 12471219 12471231 5 91 1.5 8.0 4.8 0.9 97 chr2L 12471134 intron bun - chr2L 12471182 intron bun - chr2L 12471231 intron bun - chr2L_5_12470001 chr2L_12470001 RAL-426 352 chr2L 12480537 12480568 chr2L 12480632 12480665 4 96 1.5 2.5 2.0 1.3 128 chr2L 12480537 intron bun - chr2L 12480601 intron bun - chr2L 12480665 intron bun - chr2L_4_12480001 chr2L_12480001 RAL-426 353 chr2L 12487868 12487917 chr2L 12487967 12488012 21 92 2.5 6.5 4.5 3.8 144 chr2L 12487868 intron bun - chr2L 12487940 intron bun - chr2L 12488012 intron bun - chr2L_21_12485001 chr2L_12485001 RAL-426 354 chr2L 12502166 12502210 chr2L 12502266 12502310 8 99 18.5 16.0 17.2 0.4 144 chr2L 12502166 intron bun - chr2L 12502238 intron bun - chr2L 12502310 intron bun - chr2L_8_12500001 chr2L_12500001 RAL-426 355 chr2L 12529235 12529259 chr2L 12529404 12529431 6 170 6.5 9.0 7.8 0.7 196 chr2L 12529235 intron bun - chr2L 12529333 intron bun - chr2L 12529431 intron bun - chr2L_6_12525001 chr2L_12525001 RAL-426 356 chr2L 12558320 12558333 chr2L 12565463 12565482 HMS-Beagle 4 7145 3.0 3.5 3.2 1.0 7162 chr2L 12558320 intergenic not near genes chr2L 12561901 intergenic not near genes chr2L 12565482 intergenic not near genes chr2L_4_12560001 chr2L_12560001 RAL-426 357 chr2L 12728902 12728947 chr2L 12729165 12729208 pogo 4 262 5.5 3.0 4.2 0.8 306 chr2L 12728902 intron MRP + chr2L 12729055 intron MRP + chr2L 12729208 exon MRP + chr2L_4_12725001 chr2L_12725001 RAL-426 358 chr2L 12731043 12731080 chr2L 12735826 12735867 F-element 14 4786 4.0 8.0 6.0 2.0 4824 chr2L 12731043 intron MRP + chr2L 12733455 intron MRP + chr2L 12735867 intron MRP + chr2L_14_12730001 chr2L_12730001 RAL-426 359 chr2L 12739160 12739198 chr2L 12743956 12743999 Doc 13 4799 6.5 8.5 7.5 1.5 4839 chr2L 12739160 exon MRP + chr2L 12741580 intron MRP + chr2L 12743999 exon MRP + chr2L_13_12740001 chr2L_12740001 RAL-426 360 chr2L 12781782 12781807 chr2L 12789245 12789277 Quasimodo 11 7465 7.0 4.5 5.8 1.6 7495 chr2L 12781782 intergenic not near genes chr2L 12785530 intergenic not near genes chr2L 12789277 intergenic not near genes chr2L_11_12785001 chr2L_12785001 RAL-426 361 chr2L 12791588 12791632 chr2L 12795282 12795308 F-element 10 3683 4.0 4.0 4.0 2.0 3720 chr2L 12791588 intergenic not near genes chr2L 12793448 intergenic not near genes chr2L 12795308 intergenic not near genes chr2L_10_12790001 chr2L_12790001 RAL-426 362 chr2L 12861685 12861731 chr2L 12863161 12863178 hobo 7 1471 4.0 3.0 3.5 1.6 1493 chr2L 12861685 intergenic not near genes chr2L 12862432 intergenic not near genes chr2L 12863178 intergenic not near genes chr2L_7_12860001 chr2L_12860001 RAL-426 363 chr2L 12894024 12894051 chr2L 12895489 12895529 hobo 5 1460 6.0 4.5 5.2 0.8 1505 chr2L 12894024 intergenic not near genes chr2L 12894776 intergenic not near genes chr2L 12895529 intergenic not near genes chr2L_5_12890001 chr2L_12890001 RAL-426 364 chr2L 12895493 12895509 chr2L 12895745 12895766 6 261 10.5 11.5 11.0 0.5 273 chr2L 12895493 intergenic not near genes chr2L 12895630 intergenic not near genes chr2L 12895766 intergenic not near genes chr2L_6_12895001 chr2L_12895001 RAL-426 365 chr2L 12933830 12933883 chr2L 12941317 12941370 blood 14 7482 3.5 4.0 3.8 2.9 7540 chr2L 12933830 intergenic not near genes chr2L 12937600 intergenic not near genes chr2L 12941370 intergenic not near genes chr2L_14_12935001 chr2L_12935001 RAL-426 366 chr2L 12963775 12963825 chr2L 12963896 12963933 9 110 13.5 11.5 12.5 0.7 158 chr2L 12963775 intergenic not near genes chr2L 12963854 intergenic not near genes chr2L 12963933 intergenic not near genes chr2L_9_12960001 chr2L_12960001 RAL-426 367 chr2L 13036249 13036268 chr2L 13036511 13036529 X-element 5 262 9.0 9.5 9.2 0.5 280 chr2L 13036249 intron CG9932 - chr2L 13036389 intron CG9932 - chr2L 13036529 intron CG9932 - chr2L_5_13035001 chr2L_13035001 RAL-426 368 chr2L 13147744 13147777 chr2L 13147827 13147858 8 92 4.0 3.5 3.8 1.7 114 chr2L 13147744 intergenic not near genes chr2L 13147801 intergenic not near genes chr2L 13147858 intergenic not near genes chr2L_8_13145001 chr2L_13145001 RAL-426 369 chr2L 13193346 13193355 chr2L 13193448 13193455 4 102 11.5 14.0 12.8 0.3 109 chr2L 13193346 intron Edem2 + chr2L 13193400 intron Edem2 + chr2L 13193455 intron Edem2 + chr2L_4_13190001 chr2L_13190001 RAL-426 370 chr2L 13241939 13241952 chr2L 13244342 13244345 BS 5 2402 0.5 2.0 1.2 2.3 2406 chr2L 13241939 5` UTR CR45330 + chr2L 13243142 intron CR45330 + chr2L 13244345 5` UTR CR45330 + chr2L_5_13240001 chr2L_13240001 RAL-426 371 chr2L 13323134 13323171 chr2L 13324159 13324190 4 1024 5.0 3.0 4.0 0.8 1056 chr2L 13323134 intron CG43778 - chr2L 13323662 intron CG43778 - chr2L 13324190 intron CG43778 - chr2L_4_13320001 chr2L_13320001 RAL-426 372 chr2L 13328533 13328566 chr2L 13328917 13328950 7 384 15.0 8.5 11.8 0.5 417 chr2L 13328533 intron CG43778 - chr2L 13328742 intron CG43778 - chr2L 13328950 intron CG43778 - chr2L_7_13325001 chr2L_13325001 RAL-426 373 chr2L 13342035 13342062 chr2L 13342136 13342163 7 100 4.5 2.0 3.2 1.7 128 chr2L 13342035 intergenic not near genes chr2L 13342099 intergenic not near genes chr2L 13342163 intergenic not near genes chr2L_7_13340001 chr2L_13340001 RAL-426 374 chr2L 13398735 13398751 chr2L 13398835 13398851 4 100 5.5 8.0 6.8 0.5 116 chr2L 13398735 intergenic CG10859 -,CR44600 -,CG7110 + chr2L 13398793 intergenic CR44600 -,CG10859 -,CG7110 + chr2L 13398851 intergenic CR44600 -,CG7110 +,CG10859 - chr2L_4_13395001 chr2L_13395001 RAL-426 375 chr2L 13405635 13405676 chr2L 13410443 13410493 Doc 17 4811 4.0 2.5 3.2 4.0 4858 chr2L 13405635 exon CG7110 + chr2L 13408064 intron CG7110 + chr2L 13410493 intron CG7110 + chr2L_17_13405001 chr2L_13405001 RAL-426 376 chr2L 13432978 13433010 chr2L 13433099 13433103 5 111 13.5 13.0 13.2 0.4 125 chr2L 13432978 intron CG42784 + chr2L 13433040 intron CG42784 + chr2L 13433103 intron CG42784 + chr2L_5_13430001 chr2L_13430001 RAL-426 377 chr2L 13449443 13449496 chr2L 13456897 13456952 Quasimodo 9 7453 3.5 2.0 2.8 2.4 7509 chr2L 13449443 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453198 intron CG42784 + chr2L 13456952 intron CG42784 + chr2L_9_13450001 chr2L_13450001 RAL-426 378 chr2L 13460143 13460200 chr2L 13460256 13460312 7 112 12.0 11.5 11.8 0.5 169 chr2L 13460143 intron,exon CG42784 +,CG42810 + chr2L 13460228 intron CG42784 + chr2L 13460312 intron CG42784 + chr2L_7_13460001 chr2L_13460001 RAL-426 379 chr2L 13461984 13462035 chr2L 13462138 13462185 9 153 11.0 5.5 8.2 1.0 201 chr2L 13461984 intron CG42784 + chr2L 13462084 intron CG42784 + chr2L 13462185 intron CG42784 + chr2L_9_13460001 chr2L_13460001 RAL-426 380 chr2L 13481437 13481454 chr2L 13482064 13482080 jockey 9 627 12.0 6.0 9.0 0.9 643 chr2L 13481437 intron CG42784 + chr2L 13481758 intron CG42784 + chr2L 13482080 intron CG42784 + chr2L_9_13480001 chr2L_13480001 RAL-426 381 chr2L 13622144 13622171 chr2L 13622235 13622270 4 103 12.0 8.5 10.2 0.4 126 chr2L 13622144 intron kuz + chr2L 13622207 intron kuz + chr2L 13622270 intron kuz + chr2L_4_13620001 chr2L_13620001 RAL-426 382 chr2L 13676680 13676960 chr2L 13676779 13677070 12 102 4.5 8.0 6.2 1.7 390 chr2L 13676680 intergenic CG31814 - chr2L 13676875 3` UTR CG31814 - chr2L 13677070 3` UTR CG31814 - chr2L_12_13675001 chr2L_13675001 RAL-426 383 chr2L 13693465 13693516 chr2L 13693591 13693642 4 114 11.0 6.5 8.8 0.4 177 chr2L 13693465 intron CG31814 - chr2L 13693554 intron CG31814 - chr2L 13693642 intron CG31814 - chr2L_4_13690001 chr2L_13690001 RAL-426 384 chr2L 13701874 13701896 chr2L 13701974 13701996 4 100 8.0 6.0 7.0 0.5 122 chr2L 13701874 intron CG31814 - chr2L 13701935 intron CG31814 - chr2L 13701996 intron CG31814 - chr2L_4_13700001 chr2L_13700001 RAL-426 385 chr2L 1257099 1257099 chr2L 13707680 13707697 4 12450586 16.0 11.0 13.5 0.3 12450598 chr2L 1257099 intron robo3 + chr2L 7482398 exon Ziz - chr2L 13707697 intron CG31814 - chr2L_4_7480001 chr2L_7480001 RAL-426 386 chr2L 13749195 13749210 chr2L 13749297 13749311 7 101 0.0 0.0 0.0 7.0 116 chr2L 13749195 intron,intron CR44846 +,TM9SF4 + chr2L 13749253 intron,intron CR44846 +,TM9SF4 + chr2L 13749311 intron,intron CR44846 +,TM9SF4 + chr2L_7_13745001 chr2L_13745001 RAL-426 387 chr2L 13761793 13761800 chr2L 13762924 13762931 Doc 4 1131 13.0 7.0 10.0 0.4 1138 chr2L 13761793 intron TM9SF4 + chr2L 13762362 intron TM9SF4 + chr2L 13762931 intron TM9SF4 + chr2L_4_13760001 chr2L_13760001 RAL-426 388 chr2L 13761801 13761823 chr2L 13762913 13762923 Doc 7 1118 8.0 4.5 6.2 1.0 1122 chr2L 13761801 intron TM9SF4 + chr2L 13762362 intron TM9SF4 + chr2L 13762923 intron TM9SF4 + chr2L_7_13760001 chr2L_13760001 RAL-426 389 chr2L 13809724 13809739 chr2L 13810016 13810034 4 278 23.5 26.0 24.8 0.2 310 chr2L 13809724 3` UTR,3` UTR CAH1 +,adat - chr2L 13809879 3` UTR,3` UTR CAH1 +,adat - chr2L 13810034 3` UTR adat - chr2L_4_13805001 chr2L_13805001 RAL-426 390 chr2L 13846167 13846199 chr2L 13846255 13846302 5 97 8.5 8.5 8.5 0.5 135 chr2L 13846167 intron CenG1A + chr2L 13846234 intron CenG1A + chr2L 13846302 intron CenG1A + chr2L_5_13845001 chr2L_13845001 RAL-426 391 chr2L 13853083 13853118 chr2L 13862251 13862287 roo 10 9168 4.5 4.5 4.5 1.8 9204 chr2L 13853083 intron CenG1A + chr2L 13857685 intron CenG1A + chr2L 13862287 intron CenG1A + chr2L_10_13855001 chr2L_13855001 RAL-426 392 chr2L 13966093 13966111 chr2L 13966261 13966280 5 169 0.5 16.0 8.2 0.5 187 chr2L 13966093 intron NimB2 - chr2L 13966186 intron NimB2 - chr2L 13966280 intron NimB2 - chr2L_5_13965001 chr2L_13965001 RAL-426 393 chr2L 14118642 14118679 chr2L 14118761 14118798 12 116 19.5 11.0 15.2 0.7 156 chr2L 14118642 intergenic not near genes chr2L 14118720 intergenic not near genes chr2L 14118798 intergenic not near genes chr2L_12_14115001 chr2L_14115001 RAL-426 394 chr2L 14159128 14159182 chr2L 14159229 14159283 5 94 11.5 13.0 12.2 0.4 155 chr2L 14159128 3` UTR CG17341 + chr2L 14159206 3` UTR CG17341 + chr2L 14159283 3` UTR CG17341 + chr2L_5_14155001 chr2L_14155001 RAL-426 395 chr2L 14160683 14160707 chr2L 14160771 14160813 5 100 10.0 11.0 10.5 0.4 130 chr2L 14160683 intergenic CG17341 +,CG43332 - chr2L 14160748 intergenic CG17341 +,CG43332 - chr2L 14160813 intergenic CG17341 +,CG43332 - chr2L_5_14160001 chr2L_14160001 RAL-426 396 chr2L 14161441 14161463 chr2L 14161540 14161566 4 105 18.5 20.5 19.5 0.2 125 chr2L 14161441 exon CG43332 - chr2L 14161504 exon CG43332 - chr2L 14161566 exon CG43332 - chr2L_4_14160001 chr2L_14160001 RAL-426 397 chr2L 14180069 14180087 chr2L 14180165 14180176 5 94 15.0 10.5 12.8 0.4 107 chr2L 14180069 intron CG43333 - chr2L 14180122 intron CG43333 - chr2L 14180176 intron CG43333 - chr2L_5_14180001 chr2L_14180001 RAL-426 398 chr2L 14229608 14229621 chr2L 14229719 14229734 5 112 7.0 11.0 9.0 0.5 126 chr2L 14229608 intron Dyrk2 - chr2L 14229671 intron Dyrk2 - chr2L 14229734 intron Dyrk2 - chr2L_5_14225001 chr2L_14225001 RAL-426 399 chr2L 14374765 14374807 chr2L 14374875 14374918 12 111 1.0 2.0 1.5 4.8 153 chr2L 14374765 intergenic not near genes chr2L 14374842 intergenic not near genes chr2L 14374918 intergenic not near genes chr2L_12_14370001 chr2L_14370001 RAL-426 400 chr2L 14391935 14391946 chr2L 14392031 14392042 5 95 3.0 5.5 4.2 1.0 107 chr2L 14391935 exon elB - chr2L 14391988 intron elB - chr2L 14392042 intron elB - chr2L_5_14390001 chr2L_14390001 RAL-426 401 chr2L 14427501 14427534 chr2L 14427605 14427645 5 109 4.5 5.0 4.8 0.9 144 chr2L 14427501 intergenic not near genes chr2L 14427573 intergenic not near genes chr2L 14427645 intergenic not near genes chr2L_5_14425001 chr2L_14425001 RAL-426 402 chr2L 14488979 14489013 chr2L 14489082 14489115 5 102 7.0 10.5 8.8 0.5 136 chr2L 14488979 intergenic not near genes chr2L 14489047 intergenic not near genes chr2L 14489115 intergenic not near genes chr2L_5_14485001 chr2L_14485001 RAL-426 403 chr2L 14549134 14549171 chr2L 14549230 14549267 10 96 16.5 10.5 13.5 0.7 133 chr2L 14549134 intergenic CG4218 - chr2L 14549200 intergenic CG4218 - chr2L 14549267 intergenic CG4218 - chr2L_10_14545001 chr2L_14545001 RAL-426 404 chr2L 14555126 14555266 chr2L 14555225 14555365 13 97 7.0 2.5 4.8 2.2 239 chr2L 14555126 intergenic not near genes chr2L 14555246 intergenic not near genes chr2L 14555365 intergenic not near genes chr2L_13_14555001 chr2L_14555001 RAL-426 405 chr2L 14588380 14588418 chr2L 14588547 14588568 20 166 2.5 2.0 2.2 6.2 188 chr2L 14588380 intergenic CG42680 - chr2L 14588474 intergenic CG42680 - chr2L 14588568 intergenic CG42680 - chr2L_20_14585001 chr2L_14585001 RAL-426 406 chr2L 14601957 14602002 chr2L 14602061 14602106 14 103 4.5 3.5 4.0 2.8 149 chr2L 14601957 exon osp - chr2L 14602032 intron osp - chr2L 14602106 intron osp - chr2L_14_14600001 chr2L_14600001 RAL-426 407 chr2L 14678343 14678384 chr2L 14678461 14678510 12 118 16.0 16.0 16.0 0.7 167 chr2L 14678343 intron osp - chr2L 14678426 intron osp - chr2L 14678510 intron osp - chr2L_12_14675001 chr2L_14675001 RAL-426 408 chr2L 14707189 14707236 chr2L 14707328 14707375 14 137 7.0 2.0 4.5 2.5 186 chr2L 14707189 intergenic not near genes chr2L 14707282 intergenic not near genes chr2L 14707375 intergenic not near genes chr2L_14_14705001 chr2L_14705001 RAL-426 409 chr2L 14706765 14706778 chr2L 14709008 14709020 4 2242 17.5 30.0 23.8 0.2 2255 chr2L 14706765 intergenic not near genes chr2L 14707892 intergenic not near genes chr2L 14709020 intergenic not near genes chr2L_4_14705001 chr2L_14705001 RAL-426 410 chr2L 14715514 14715564 chr2L 14715625 14715675 5 111 11.0 13.0 12.0 0.4 161 chr2L 14715514 intergenic not near genes chr2L 14715594 intergenic not near genes chr2L 14715675 intergenic not near genes chr2L_5_14715001 chr2L_14715001 RAL-426 411 chr2L 14754899 14754942 chr2L 14755028 14755069 6 128 8.5 7.5 8.0 0.7 170 chr2L 14754899 intergenic not near genes chr2L 14754984 intergenic not near genes chr2L 14755069 intergenic not near genes chr2L_6_14750001 chr2L_14750001 RAL-426 412 chr2L 14774212 14774238 chr2L 14774448 14774474 7 236 15.0 4.5 9.8 0.6 262 chr2L 14774212 3` UTR CG4650 - chr2L 14774343 3` UTR CG4650 - chr2L 14774474 3` UTR CG4650 - chr2L_7_14770001 chr2L_14770001 RAL-426 413 chr2L 14778438 14778470 chr2L 14778625 14778639 7 178 10.5 8.0 9.2 0.7 201 chr2L 14778438 intergenic not near genes chr2L 14778538 intergenic not near genes chr2L 14778639 intergenic not near genes chr2L_7_14775001 chr2L_14775001 RAL-426 414 chr2L 14787248 14787293 chr2L 14787345 14787391 6 98 2.5 3.0 2.8 1.6 143 chr2L 14787248 intergenic not near genes chr2L 14787320 intergenic not near genes chr2L 14787391 intergenic not near genes chr2L_6_14785001 chr2L_14785001 RAL-426 415 chr2L 14803865 14803879 chr2L 14809088 14809100 copia 4 5222 8.0 6.0 7.0 0.5 5235 chr2L 14803865 intergenic not near genes chr2L 14806482 intergenic not near genes chr2L 14809100 intergenic not near genes chr2L_4_14805001 chr2L_14805001 RAL-426 416 chr2L 14803884 14803907 chr2L 14809080 14809127 copia 6 5217 4.5 4.0 4.2 1.2 5243 chr2L 14803884 intergenic not near genes chr2L 14806506 intergenic not near genes chr2L 14809127 intergenic not near genes chr2L_6_14805001 chr2L_14805001 RAL-426 417 chr2L 14833783 14833821 chr2L 14833905 14833945 6 123 2.5 4.0 3.2 1.4 162 chr2L 14833783 intergenic not near genes chr2L 14833864 intergenic not near genes chr2L 14833945 intergenic not near genes chr2L_6_14830001 chr2L_14830001 RAL-426 418 chr2L 14839729 14839774 chr2L 14839825 14839869 6 95 6.0 5.5 5.8 0.9 140 chr2L 14839729 intergenic not near genes chr2L 14839799 intergenic not near genes chr2L 14839869 intergenic not near genes chr2L_6_14835001 chr2L_14835001 RAL-426 419 chr2L 14840974 14841006 chr2L 14841081 14841113 11 106 4.0 5.5 4.8 1.9 139 chr2L 14840974 3` UTR CR43805 - chr2L 14841044 3` UTR CR43805 - chr2L 14841113 3` UTR CR43805 - chr2L_11_14840001 chr2L_14840001 RAL-426 420 chr2L 14854943 14854984 chr2L 14855039 14855056 6 86 12.5 14.5 13.5 0.4 113 chr2L 14854943 intergenic not near genes chr2L 14855000 intergenic not near genes chr2L 14855056 intergenic not near genes chr2L_6_14855001 chr2L_14855001 RAL-426 421 chr2L 14889940 14889983 chr2L 14890380 14890410 jockey 16 443 5.0 3.5 4.2 3.1 470 chr2L 14889940 intergenic not near genes chr2L 14890175 intergenic not near genes chr2L 14890410 intergenic not near genes chr2L_16_14890001 chr2L_14890001 RAL-426 422 chr2L 14945392 14945440 chr2L 14948282 14948330 9 2886 3.5 1.5 2.5 2.6 2938 chr2L 14945392 intron CG42313 - chr2L 14946861 intron CG42313 - chr2L 14948330 intron CG42313 - chr2L_9_14945001 chr2L_14945001 RAL-426 423 chr2L 14984368 14984395 chr2L 14991976 14992017 opus 8 7617 6.5 3.5 5.0 1.3 7649 chr2L 14984368 intron mol - chr2L 14988192 intron mol - chr2L 14992017 intron mol - chr2L_8_14985001 chr2L_14985001 RAL-426 424 chr2L 15013132 15013174 chr2L 15013256 15013303 8 124 8.0 10.0 9.0 0.8 171 chr2L 15013132 intergenic CR43856 - chr2L 15013218 intergenic not near genes chr2L 15013303 intergenic not near genes chr2L_8_15010001 chr2L_15010001 RAL-426 425 chr2L 15021427 15021471 chr2L 15021523 15021566 7 96 9.0 6.0 7.5 0.8 139 chr2L 15021427 intron GABA-B-R1 + chr2L 15021496 intron GABA-B-R1 + chr2L 15021566 intron GABA-B-R1 + chr2L_7_15020001 chr2L_15020001 RAL-426 426 chr2L 15044698 15044716 chr2L 15044794 15044812 5 95 8.5 5.5 7.0 0.6 114 chr2L 15044698 intergenic ck - chr2L 15044755 intergenic ck - chr2L 15044812 intergenic ck - chr2L_5_15040001 chr2L_15040001 RAL-426 427 chr2L 15078059 15078096 chr2L 15078167 15078199 7 107 1.5 6.0 3.8 1.5 140 chr2L 15078059 intron CG15270 + chr2L 15078129 intron CG15270 + chr2L 15078199 intron CG15270 + chr2L_7_15075001 chr2L_15075001 RAL-426 428 chr2L 15087735 15087766 chr2L 15087865 15087896 4 129 7.0 14.5 10.8 0.3 161 chr2L 15087735 exon CG15270 + chr2L 15087816 intron CG15270 + chr2L 15087896 intron CG15270 + chr2L_4_15085001 chr2L_15085001 RAL-426 429 chr2L 15102761 15102782 chr2L 15102868 15102888 4 106 5.5 8.0 6.8 0.5 127 chr2L 15102761 intergenic not near genes chr2L 15102824 intergenic not near genes chr2L 15102888 intergenic not near genes chr2L_4_15100001 chr2L_15100001 RAL-426 430 chr2L 15192201 15192234 chr2L 15192345 15192378 5 141 9.0 13.5 11.2 0.4 177 chr2L 15192201 intron CG4168 - chr2L 15192290 intron CG4168 - chr2L 15192378 intron CG4168 - chr2L_5_15190001 chr2L_15190001 RAL-426 431 chr2L 15226377 15226395 chr2L 15226444 15226491 7 91 3.5 4.0 3.8 1.5 114 chr2L 15226377 intergenic not near genes chr2L 15226434 intergenic not near genes chr2L 15226491 intergenic not near genes chr2L_7_15225001 chr2L_15225001 RAL-426 432 chr2L 15285386 15285407 chr2L 15285480 15285528 5 109 13.5 14.0 13.8 0.3 142 chr2L 15285386 exon CG15263 + chr2L 15285457 exon CG15263 + chr2L 15285528 exon CG15263 + chr2L_5_15285001 chr2L_15285001 RAL-426 433 chr2L 15324594 15324619 chr2L 15324670 15324710 5 77 9.5 12.0 10.8 0.4 116 chr2L 15324594 intergenic not near genes chr2L 15324652 intergenic not near genes chr2L 15324710 intergenic not near genes chr2L_5_15320001 chr2L_15320001 RAL-426 434 chr2L 15427330 15427350 chr2L 15427445 15427464 4 115 2.0 1.0 1.5 1.6 134 chr2L 15427330 intergenic not near genes chr2L 15427397 intergenic not near genes chr2L 15427464 intergenic not near genes chr2L_4_15425001 chr2L_15425001 RAL-426 435 chr2L 15442255 15442286 chr2L 15442358 15442377 6 98 0.5 0.0 0.2 5.0 122 chr2L 15442255 5` UTR CR44862 + chr2L 15442316 intergenic CR44862 + chr2L 15442377 intergenic CR44862 + chr2L_6_15440001 chr2L_15440001 RAL-426 436 chr2L 15446044 15446078 chr2L 15453531 15453565 blood 6 7488 2.5 3.5 3.0 1.5 7521 chr2L 15446044 intergenic not near genes chr2L 15449804 intergenic not near genes chr2L 15453565 intergenic not near genes chr2L_6_15445001 chr2L_15445001 RAL-426 437 chr2L 15482566 15482605 chr2L 15482722 15482761 12 154 0.5 4.5 2.5 3.4 195 chr2L 15482566 intergenic not near genes chr2L 15482664 intergenic not near genes chr2L 15482761 intergenic not near genes chr2L_12_15480001 chr2L_15480001 RAL-426 438 chr2L 15483265 15483308 chr2L 15483371 15483414 10 102 3.0 0.0 1.5 4.0 149 chr2L 15483265 intergenic not near genes chr2L 15483340 intergenic not near genes chr2L 15483414 intergenic not near genes chr2L_10_15480001 chr2L_15480001 RAL-426 439 chr2L 15499897 15499936 chr2L 15500005 15500041 5 107 2.0 3.5 2.8 1.3 144 chr2L 15499897 intron lace + chr2L 15499969 intron lace + chr2L 15500041 intron lace + chr2L_5_15495001 chr2L_15495001 RAL-426 440 chr2L 15556604 15556850 chr2L 15556771 15556960 4 152 14.5 10.5 12.5 0.3 356 chr2L 15556604 intron kek3 + chr2L 15556782 intron kek3 + chr2L 15556960 intron kek3 + chr2L_4_15555001 chr2L_15555001 RAL-426 441 chr2L 15586392 15586439 chr2L 15593464 15593510 297 9 7071 2.0 2.0 2.0 3.0 7118 chr2L 15586392 intergenic not near genes chr2L 15589951 intergenic not near genes chr2L 15593510 intergenic not near genes chr2L_9_15585001 chr2L_15585001 RAL-426 442 chr2L 15598754 15598782 chr2L 15598860 15598888 6 106 4.5 3.5 4.0 1.2 134 chr2L 15598754 intergenic not near genes chr2L 15598821 intergenic not near genes chr2L 15598888 intergenic not near genes chr2L_6_15595001 chr2L_15595001 RAL-426 443 chr2L 15610696 15610713 chr2L 15613575 15613588 4 2874 25.0 12.0 18.5 0.2 2892 chr2L 15610696 3` UTR,5` UTR CG15255 -,CR44865 + chr2L 15612142 intergenic CG11864 -,CG15255 - chr2L 15613588 intergenic CG11864 -,CG15254 - chr2L_4_15610001 chr2L_15610001 RAL-426 444 chr2L 15732492 15732535 chr2L 15732607 15732647 7 114 9.0 9.5 9.2 0.7 155 chr2L 15732492 intron CycE - chr2L 15732570 intron CycE - chr2L 15732647 intron CycE - chr2L_7_15730001 chr2L_15730001 RAL-426 445 chr2L 15906177 15906214 chr2L 15906270 15906292 20 100 1.0 2.0 1.5 8.0 115 chr2L 15906177 intron beat-Ib - chr2L 15906234 intron beat-Ib - chr2L 15906292 intron beat-Ib - chr2L_20_15905001 chr2L_15905001 RAL-426 446 chr2L 15907329 15907371 chr2L 15907704 15907746 8 370 12.0 12.0 12.0 0.6 417 chr2L 15907329 intron beat-Ib - chr2L 15907538 intron beat-Ib - chr2L 15907746 intron beat-Ib - chr2L_8_15905001 chr2L_15905001 RAL-426 447 chr2L 15930914 15930932 chr2L 15930998 15931015 5 96 5.0 8.5 6.8 0.6 101 chr2L 15930914 intron beat-Ib - chr2L 15930964 intron beat-Ib - chr2L 15931015 intron beat-Ib - chr2L_5_15930001 chr2L_15930001 RAL-426 448 chr2L 15956028 15956058 chr2L 15957495 15957529 hobo 7 1481 5.5 1.0 3.2 1.7 1501 chr2L 15956028 intron beat-Ib - chr2L 15956778 intron beat-Ib - chr2L 15957529 intron beat-Ib - chr2L_7_15955001 chr2L_15955001 RAL-426 449 chr2L 15971985 15971994 chr2L 15972103 15972112 4 118 0.0 5.5 2.8 1.1 127 chr2L 15971985 intergenic not near genes chr2L 15972048 intergenic not near genes chr2L 15972112 intergenic not near genes chr2L_4_15970001 chr2L_15970001 RAL-426 450 chr2L 16001454 16001492 chr2L 16001557 16001600 11 105 0.0 4.0 2.0 3.7 146 chr2L 16001454 intron beat-Ic + chr2L 16001527 intron beat-Ic + chr2L 16001600 intron beat-Ic + chr2L_11_16000001 chr2L_16000001 RAL-426 451 chr2L 16008685 16008690 chr2L 16008806 16008811 4 121 1.5 0.5 1.0 2.0 126 chr2L 16008685 intron beat-Ic + chr2L 16008748 intron beat-Ic + chr2L 16008811 intron beat-Ic + chr2L_4_16005001 chr2L_16005001 RAL-426 452 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 11 145889 19.0 23.5 21.2 0.5 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_11_16140001 chr2L_16140001 RAL-426 453 chr2L 16098901 16098950 chr2L 16099009 16099058 10 104 3.0 3.5 3.2 2.4 157 chr2L 16098901 intergenic not near genes chr2L 16098980 intergenic not near genes chr2L 16099058 intergenic not near genes chr2L_10_16095001 chr2L_16095001 RAL-426 454 chr2L 16123472 16123559 chr2L 16123573 16123675 12 105 2.5 2.5 2.5 3.4 203 chr2L 16123472 intergenic not near genes chr2L 16123574 intergenic not near genes chr2L 16123675 intergenic not near genes chr2L_12_16120001 chr2L_16120001 RAL-426 455 chr2L 16139323 16139378 chr2L 16139881 16139927 7 554 8.5 8.0 8.2 0.8 604 chr2L 16139323 intergenic not near genes chr2L 16139625 intergenic not near genes chr2L 16139927 intergenic not near genes chr2L_7_16135001 chr2L_16135001 RAL-426 456 chr2L 16141146 16141196 chr2L 16146373 16146423 copia 12 5227 2.5 5.5 4.0 2.4 5277 chr2L 16141146 intergenic not near genes chr2L 16143784 intergenic not near genes chr2L 16146423 intergenic not near genes chr2L_12_16140001 chr2L_16140001 RAL-426 457 chr2L 16153732 16153745 chr2L 16160812 16160820 297 6 7084 9.5 2.5 6.0 0.9 7088 chr2L 16153732 intergenic not near genes chr2L 16157276 intergenic not near genes chr2L 16160820 intergenic not near genes chr2L_6_16155001 chr2L_16155001 RAL-426 458 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 10 145889 19.0 23.5 21.2 0.5 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_10_16140001 chr2L_16140001 RAL-426 459 chr2L 16226171 16226213 chr2L 16226278 16226320 7 106 8.0 12.0 10.0 0.6 149 chr2L 16226171 intergenic not near genes chr2L 16226246 intergenic not near genes chr2L 16226320 intergenic not near genes chr2L_7_16225001 chr2L_16225001 RAL-426 460 chr2L 16243220 16243373 chr2L 16243317 16243473 7 97 9.0 9.5 9.2 0.7 253 chr2L 16243220 exon CG42818 + chr2L 16243346 exon CG42818 + chr2L 16243473 exon CG42818 + chr2L_7_16240001 chr2L_16240001 RAL-426 461 chr2L 16254893 16254917 chr2L 16255159 16255196 4 271 6.0 12.0 9.0 0.4 303 chr2L 16254893 intron PRL-1 - chr2L 16255044 intron PRL-1 - chr2L 16255196 intron PRL-1 - chr2L_4_16255001 chr2L_16255001 RAL-426 462 chr2L 16363944 16363970 chr2L 16364210 16364235 8 266 1.0 6.0 3.5 1.8 291 chr2L 16363944 intergenic not near genes chr2L 16364090 intergenic not near genes chr2L 16364235 intergenic not near genes chr2L_8_16360001 chr2L_16360001 RAL-426 463 chr2L 16391793 16391831 chr2L 16391887 16391927 6 96 3.5 1.5 2.5 1.7 134 chr2L 16391793 intergenic not near genes chr2L 16391860 intergenic not near genes chr2L 16391927 intergenic not near genes chr2L_6_16390001 chr2L_16390001 RAL-426 464 chr2L 16419470 16419502 chr2L 16419564 16419594 6 91 11.0 14.5 12.8 0.4 124 chr2L 16419470 intron CG5888 - chr2L 16419532 intron CG5888 - chr2L 16419594 intron CG5888 - chr2L_6_16415001 chr2L_16415001 RAL-426 465 chr2L 16497958 16497990 chr2L 16498072 16498104 6 112 6.0 5.0 5.5 0.9 146 chr2L 16497958 intron Tpr2 + chr2L 16498031 intron Tpr2 + chr2L 16498104 intron Tpr2 + chr2L_6_16495001 chr2L_16495001 RAL-426 466 chr2L 16502650 16502675 chr2L 16502958 16502983 4 304 13.0 13.5 13.2 0.3 333 chr2L 16502650 intron Tpr2 + chr2L 16502816 intron Tpr2 + chr2L 16502983 intron Tpr2 + chr2L_4_16500001 chr2L_16500001 RAL-426 467 chr2L 16522984 16523023 chr2L 16523265 16523293 5 276 7.0 12.0 9.5 0.5 309 chr2L 16522984 intron CG5953 - chr2L 16523138 intron CG5953 - chr2L 16523293 intron CG5953 - chr2L_5_16520001 chr2L_16520001 RAL-426 468 chr2L 16583084 16583116 chr2L 16583192 16583224 4 108 7.5 7.0 7.2 0.5 140 chr2L 16583084 intron CG42389 + chr2L 16583154 intron CG42389 + chr2L 16583224 intron CG42389 + chr2L_4_16580001 chr2L_16580001 RAL-426 469 chr2L 16583530 16583577 chr2L 16583684 16583728 8 152 7.0 4.5 5.8 1.2 198 chr2L 16583530 intron CG42389 + chr2L 16583629 intron CG42389 + chr2L 16583728 intron CG42389 + chr2L_8_16580001 chr2L_16580001 RAL-426 470 chr2L 16594013 16594133 chr2L 16594106 16594243 7 100 4.0 5.0 4.5 1.3 230 chr2L 16594013 intron CG42389 + chr2L 16594128 intron CG42389 + chr2L 16594243 intron CG42389 + chr2L_7_16590001 chr2L_16590001 RAL-426 471 chr2L 16621623 16621645 chr2L 16621716 16621742 4 95 8.5 12.5 10.5 0.3 119 chr2L 16621623 intron CG42389 + chr2L 16621682 intron CG42389 + chr2L 16621742 intron CG42389 + chr2L_4_16620001 chr2L_16620001 RAL-426 472 chr2L 16693893 16693940 chr2L 16693994 16694041 6 101 5.5 4.5 5.0 1.0 148 chr2L 16693893 intron grp + chr2L 16693967 intron grp + chr2L 16694041 intron grp + chr2L_6_16690001 chr2L_16690001 RAL-426 473 chr2L 16695106 16695289 chr2L 16695209 16695393 12 102 5.0 5.5 5.2 1.9 287 chr2L 16695106 intron grp + chr2L 16695250 intron grp + chr2L 16695393 intron grp + chr2L_12_16695001 chr2L_16695001 RAL-426 474 chr2L 16697051 16697068 chr2L 16697264 16697281 5 212 3.5 0.5 2.0 1.7 230 chr2L 16697051 intron grp + chr2L 16697166 intron grp + chr2L 16697281 intron grp + chr2L_5_16695001 chr2L_16695001 RAL-426 475 chr2L 16701445 16701482 chr2L 16701535 16701577 7 95 10.5 5.5 8.0 0.8 132 chr2L 16701445 intergenic not near genes chr2L 16701511 intergenic not near genes chr2L 16701577 intergenic not near genes chr2L_7_16700001 chr2L_16700001 RAL-426 476 chr2L 16703653 16703890 chr2L 16703914 16703992 4 142 2.5 2.5 2.5 1.1 339 chr2L 16703653 intergenic not near genes chr2L 16703822 intergenic CG31808 - chr2L 16703992 intergenic CG31808 - chr2L_4_16700001 chr2L_16700001 RAL-426 477 chr2L 16796067 16796101 chr2L 16796188 16796222 7 120 0.0 1.5 0.8 3.9 155 chr2L 16796067 intergenic Ugt36Ba + chr2L 16796144 intergenic Ugt36Ba +,Ugt36Bb + chr2L 16796222 intergenic Ugt36Ba +,Ugt36Bb + chr2L_7_16795001 chr2L_16795001 RAL-426 478 chr2L 16818814 16818847 chr2L 16818910 16818933 7 92 15.0 13.0 14.0 0.5 119 chr2L 16818814 intron,intron CG13280 -,mdy + chr2L 16818874 intron,intron CG13280 -,mdy + chr2L 16818933 intron,intron CG13280 -,mdy + chr2L_7_16815001 chr2L_16815001 RAL-426 479 chr2L 16852789 16852806 chr2L 16859950 16859966 Doc4-element 4 7161 8.0 1.0 4.5 0.7 7177 chr2L 16852789 intergenic CG31810 - chr2L 16856378 intron CG31809 - chr2L 16859966 intergenic CG6012 - chr2L_4_16855001 chr2L_16855001 RAL-426 480 chr2L 16867021 16867040 chr2L 16867136 16867155 8 114 2.5 4.5 3.5 1.8 134 chr2L 16867021 intergenic not near genes chr2L 16867088 intergenic not near genes chr2L 16867155 intergenic not near genes chr2L_8_16865001 chr2L_16865001 RAL-426 481 chr2L 16939979 16940012 chr2L 16940071 16940106 7 96 2.5 6.0 4.2 1.3 127 chr2L 16939979 intergenic not near genes chr2L 16940042 intergenic not near genes chr2L 16940106 intergenic not near genes chr2L_7_16940001 chr2L_16940001 RAL-426 482 chr2L 16944217 16944232 chr2L 16944296 16944336 5 97 11.5 12.0 11.8 0.4 119 chr2L 16944217 intergenic not near genes chr2L 16944276 intergenic CR43053 - chr2L 16944336 intergenic CR43053 - chr2L_5_16940001 chr2L_16940001 RAL-426 483 chr2L 16949593 16949647 chr2L 16949697 16949698 8 97 5.0 6.5 5.8 1.2 105 chr2L 16949593 intron CR44393 - chr2L 16949646 intron CR44393 - chr2L 16949698 intron CR44393 - chr2L_8_16945001 chr2L_16945001 RAL-426 484 chr2L 16958088 16958136 chr2L 16962896 16962924 Doc 11 4804 0.5 2.5 1.5 4.4 4836 chr2L 16958088 intergenic not near genes chr2L 16960506 intergenic not near genes chr2L 16962924 intergenic not near genes chr2L_11_16960001 chr2L_16960001 RAL-426 485 chr2L 17028694 17028713 chr2L 17028798 17028814 5 103 8.0 8.5 8.2 0.5 120 chr2L 17028694 intergenic not near genes chr2L 17028754 intergenic not near genes chr2L 17028814 intergenic not near genes chr2L_5_17025001 chr2L_17025001 RAL-426 486 chr2L 17032483 17032517 chr2L 17032588 17032603 6 100 4.0 2.5 3.2 1.4 120 chr2L 17032483 intergenic not near genes chr2L 17032543 intergenic not near genes chr2L 17032603 intergenic not near genes chr2L_6_17030001 chr2L_17030001 RAL-426 487 chr2L 17070076 17070212 chr2L 17070176 17070301 5 101 1.5 4.5 3.0 1.2 225 chr2L 17070076 intergenic not near genes chr2L 17070188 intergenic not near genes chr2L 17070301 intergenic not near genes chr2L_5_17070001 chr2L_17070001 RAL-426 488 chr2L 17101880 17101915 chr2L 17101977 17102011 10 94 1.5 3.5 2.5 2.9 131 chr2L 17101880 intergenic not near genes chr2L 17101946 intergenic not near genes chr2L 17102011 intergenic not near genes chr2L_10_17100001 chr2L_17100001 RAL-426 489 chr2L 17120822 17120869 chr2L 17120921 17120941 6 89 8.0 6.5 7.2 0.7 119 chr2L 17120822 intergenic not near genes chr2L 17120882 intergenic not near genes chr2L 17120941 intergenic not near genes chr2L_6_17120001 chr2L_17120001 RAL-426 490 chr2L 17158724 17158761 chr2L 17158846 17158882 8 121 0.5 1.5 1.0 4.0 158 chr2L 17158724 5` UTR,exon CG34106 +,beat-IIIa + chr2L 17158803 intron,intron CG34106 +,beat-IIIa + chr2L 17158882 intron,intron CG34106 +,beat-IIIa + chr2L_8_17155001 chr2L_17155001 RAL-426 491 chr2L 17167550 17167593 chr2L 17167811 17167854 pogo 12 258 0.5 6.0 3.2 2.9 304 chr2L 17167550 intron,intron CG34106 +,beat-IIIa + chr2L 17167702 intron,intron CG34106 +,beat-IIIa + chr2L 17167854 intron,intron CG34106 +,beat-IIIa + chr2L_12_17165001 chr2L_17165001 RAL-426 492 chr2L 17168176 17168210 chr2L 17168974 17169008 6 797 5.5 4.0 4.8 1.0 832 chr2L 17168176 intron,intron CG34106 +,beat-IIIa + chr2L 17168592 intron,intron CG34106 +,beat-IIIa + chr2L 17169008 intron,intron CG34106 +,beat-IIIa + chr2L_6_17165001 chr2L_17165001 RAL-426 493 chr2L 17199141 17199188 chr2L 17200628 17200669 hobo 6 1485 3.5 2.5 3.0 1.5 1528 chr2L 17199141 intron beat-IIIc - chr2L 17199905 intron beat-IIIc - chr2L 17200669 intron beat-IIIc - chr2L_6_17195001 chr2L_17195001 RAL-426 494 chr2L 17250380 17250418 chr2L 17250484 17250517 5 108 7.0 7.5 7.2 0.6 137 chr2L 17250380 intron beat-IIIc - chr2L 17250448 intron beat-IIIc - chr2L 17250517 intron beat-IIIc - chr2L_5_17250001 chr2L_17250001 RAL-426 495 chr2L 17271583 17271627 chr2L 17271692 17271727 4 106 10.0 10.0 10.0 0.4 144 chr2L 17271583 intergenic not near genes chr2L 17271655 intergenic not near genes chr2L 17271727 intergenic not near genes chr2L_4_17270001 chr2L_17270001 RAL-426 496 chr2L 17273209 17273227 chr2L 17277980 17278013 F-element 4 4778 2.0 5.5 3.8 0.8 4804 chr2L 17273209 intergenic not near genes chr2L 17275611 intergenic not near genes chr2L 17278013 intergenic not near genes chr2L_4_17275001 chr2L_17275001 RAL-426 497 chr2L 17327887 17327925 chr2L 17327992 17328031 8 104 3.5 3.5 3.5 1.8 144 chr2L 17327887 intergenic not near genes chr2L 17327959 intergenic not near genes chr2L 17328031 intergenic not near genes chr2L_8_17325001 chr2L_17325001 RAL-426 498 chr2L 17335526 17335570 chr2L 17336714 17336723 1360 4 1182 0.0 1.5 0.8 2.2 1197 chr2L 17335526 intergenic not near genes chr2L 17336124 intergenic not near genes chr2L 17336723 intergenic not near genes chr2L_4_17335001 chr2L_17335001 RAL-426 499 chr2L 17425773 17425808 chr2L 17425893 17425925 9 116 3.0 5.0 4.0 1.8 152 chr2L 17425773 intron Dif - chr2L 17425849 intron Dif - chr2L 17425925 intron Dif - chr2L_9_17425001 chr2L_17425001 RAL-426 500 chr2L 17540853 17540899 chr2L 17540970 17540998 4 99 12.0 11.0 11.5 0.3 145 chr2L 17540853 intergenic not near genes chr2L 17540926 intergenic not near genes chr2L 17540998 intergenic not near genes chr2L_4_17540001 chr2L_17540001 RAL-426 501 chr2L 17543584 17543606 chr2L 17543697 17543719 4 109 11.0 9.5 10.2 0.4 135 chr2L 17543584 intergenic not near genes chr2L 17543652 intergenic not near genes chr2L 17543719 intergenic not near genes chr2L_4_17540001 chr2L_17540001 RAL-426 502 chr2L 17571149 17571158 chr2L 17571241 17571261 5 100 0.0 5.5 2.8 1.3 112 chr2L 17571149 intergenic not near genes chr2L 17571205 intergenic not near genes chr2L 17571261 intergenic not near genes chr2L_5_17570001 chr2L_17570001 RAL-426 503 chr2L 17633878 17633899 chr2L 17633967 17633995 4 94 5.0 11.5 8.2 0.4 117 chr2L 17633878 intergenic not near genes chr2L 17633936 intergenic not near genes chr2L 17633995 intergenic not near genes chr2L_4_17630001 chr2L_17630001 RAL-426 504 chr2L 17669099 17669124 chr2L 17669189 17669221 7 94 11.5 11.5 11.5 0.6 122 chr2L 17669099 intron CadN - chr2L 17669160 intron CadN - chr2L 17669221 intron CadN - chr2L_7_17665001 chr2L_17665001 RAL-426 505 chr2L 17687508 17687520 chr2L 17692273 17692285 F-element 5 4764 3.0 4.5 3.8 1.0 4777 chr2L 17687508 intron CadN - chr2L 17689896 intron CadN - chr2L 17692285 intron CadN - chr2L_5_17685001 chr2L_17685001 RAL-426 506 chr2L 17723771 17723800 chr2L 17723884 17723909 8 112 8.5 8.5 8.5 0.8 138 chr2L 17723771 intron CadN - chr2L 17723840 intron CadN - chr2L 17723909 intron CadN - chr2L_8_17720001 chr2L_17720001 RAL-426 507 chr2L 17727546 17727573 chr2L 17727652 17727677 4 105 5.0 5.5 5.2 0.6 131 chr2L 17727546 intron CadN - chr2L 17727612 intron CadN - chr2L 17727677 intron CadN - chr2L_4_17725001 chr2L_17725001 RAL-426 508 chr2L 17727855 17727876 chr2L 17729343 17729345 hobo 5 1483 4.0 11.5 7.8 0.6 1490 chr2L 17727855 intron CadN - chr2L 17728600 intron CadN - chr2L 17729345 intron CadN - chr2L_5_17725001 chr2L_17725001 RAL-426 509 chr2L 17741134 17741181 chr2L 17741238 17741285 5 101 9.5 5.5 7.5 0.6 151 chr2L 17741134 intron CadN - chr2L 17741210 intron CadN - chr2L 17741285 intron CadN - chr2L_5_17740001 chr2L_17740001 RAL-426 510 chr2L 17819899 17819947 chr2L 17825123 17825168 copia 5 5223 3.0 1.5 2.2 1.6 5269 chr2L 17819899 intron CadN2 - chr2L 17822534 intron CadN2 - chr2L 17825168 intron CadN2 - chr2L_5_17820001 chr2L_17820001 RAL-426 511 chr2L 17863607 17863641 chr2L 17863708 17863740 4 100 8.5 10.0 9.2 0.4 133 chr2L 17863607 intron CadN2 - chr2L 17863674 intron CadN2 - chr2L 17863740 intron CadN2 - chr2L_4_17860001 chr2L_17860001 RAL-426 512 chr2L 17879985 17880000 chr2L 17880091 17880106 4 106 7.0 6.5 6.8 0.5 121 chr2L 17879985 intergenic not near genes chr2L 17880046 intergenic not near genes chr2L 17880106 intergenic not near genes chr2L_4_17880001 chr2L_17880001 RAL-426 513 chr2L 17880009 17880028 chr2L 17880089 17880135 4 100 5.0 6.5 5.8 0.6 126 chr2L 17880009 intergenic not near genes chr2L 17880072 intergenic not near genes chr2L 17880135 intergenic not near genes chr2L_4_17880001 chr2L_17880001 RAL-426 514 chr2L 17911937 17911986 chr2L 17914135 17914184 pogo 7 2187 3.5 5.0 4.2 1.3 2247 chr2L 17911937 intergenic not near genes chr2L 17913060 intergenic not near genes chr2L 17914184 intergenic CG43271 - chr2L_7_17910001 chr2L_17910001 RAL-426 515 chr2L 17951939 17951978 chr2L 17953412 17953465 hobo 10 1484 3.0 3.5 3.2 2.4 1526 chr2L 17951939 intergenic CR44398 -,CR44397 - chr2L 17952702 intergenic not near genes chr2L 17953465 intergenic not near genes chr2L_10_17950001 chr2L_17950001 RAL-426 516 chr2L 18039865 18039882 chr2L 18039966 18039966 5 97 6.5 10.0 8.2 0.5 101 chr2L 18039865 intron rdo + chr2L 18039916 intron rdo + chr2L 18039966 intron rdo + chr2L_5_18035001 chr2L_18035001 RAL-426 517 chr2L 18110067 18110104 chr2L 18110193 18110230 4 126 8.0 5.5 6.8 0.5 163 chr2L 18110067 intergenic not near genes chr2L 18110148 intergenic not near genes chr2L 18110230 intergenic not near genes chr2L_4_18110001 chr2L_18110001 RAL-426 518 chr2L 18111232 18111270 chr2L 18111335 18111354 8 100 6.5 5.5 6.0 1.1 122 chr2L 18111232 intergenic not near genes chr2L 18111293 intergenic not near genes chr2L 18111354 intergenic not near genes chr2L_8_18110001 chr2L_18110001 RAL-426 519 chr2L 18177756 18177806 chr2L 18177875 18177925 7 118 8.5 6.5 7.5 0.8 169 chr2L 18177756 intron CG42750 - chr2L 18177840 intron CG42750 - chr2L 18177925 intron CG42750 - chr2L_7_18175001 chr2L_18175001 RAL-426 520 chr2L 18196210 18196253 chr2L 18196388 18196431 13 176 12.5 14.5 13.5 0.9 221 chr2L 18196210 intron CG42750 - chr2L 18196320 intron CG42750 - chr2L 18196431 intron CG42750 - chr2L_13_18195001 chr2L_18195001 RAL-426 521 chr2L 18197476 18197479 chr2L 18197562 18197578 4 94 7.5 7.0 7.2 0.5 102 chr2L 18197476 intron CG42750 - chr2L 18197527 intron CG42750 - chr2L 18197578 intron CG42750 - chr2L_4_18195001 chr2L_18195001 RAL-426 522 chr2L 18197484 18197504 chr2L 18197561 18197573 4 77 7.5 7.5 7.5 0.5 89 chr2L 18197484 intron CG42750 - chr2L 18197528 intron CG42750 - chr2L 18197573 intron CG42750 - chr2L_4_18195001 chr2L_18195001 RAL-426 523 chr2L 18235053 18235093 chr2L 18235205 18235238 4 138 12.5 13.5 13.0 0.3 185 chr2L 18235053 intron CG42750 - chr2L 18235146 intron CG42750 - chr2L 18235238 intron CG42750 - chr2L_4_18235001 chr2L_18235001 RAL-426 524 chr2L 18248433 18248485 chr2L 18248531 18248583 13 95 4.5 6.0 5.2 2.1 150 chr2L 18248433 intron CG42750 - chr2L 18248508 intron CG42750 - chr2L 18248583 intron CG42750 - chr2L_13_18245001 chr2L_18245001 RAL-426 525 chr2L 18255498 18255514 chr2L 18255586 18255613 5 95 11.5 16.5 14.0 0.3 115 chr2L 18255498 intron CG42750 - chr2L 18255556 intron CG42750 - chr2L 18255613 intron CG42750 - chr2L_5_18255001 chr2L_18255001 RAL-426 526 chr2L 18264051 18264087 chr2L 18264148 18264184 4 97 8.5 7.0 7.8 0.5 133 chr2L 18264051 intron CG42750 - chr2L 18264118 intron CG42750 - chr2L 18264184 intron CG42750 - chr2L_4_18260001 chr2L_18260001 RAL-426 527 chr2L 18286399 18286443 chr2L 18286511 18286551 4 108 4.0 3.5 3.8 0.8 152 chr2L 18286399 intergenic not near genes chr2L 18286475 intergenic not near genes chr2L 18286551 intergenic not near genes chr2L_4_18285001 chr2L_18285001 RAL-426 528 chr2L 18289303 18289335 chr2L 18289387 18289434 7 89 8.5 8.0 8.2 0.8 131 chr2L 18289303 intergenic not near genes chr2L 18289368 intergenic not near genes chr2L 18289434 intergenic not near genes chr2L_7_18285001 chr2L_18285001 RAL-426 529 chr2L 18291530 18291559 chr2L 18291648 18291661 4 111 0.5 0.0 0.2 3.3 131 chr2L 18291530 intergenic CG43362 -,CR44693 +,CR44696 - chr2L 18291596 intergenic CR44693 +,CG43362 -,CR44696 - chr2L 18291661 intergenic CR44693 +,CG43362 -,CR44696 - chr2L_4_18290001 chr2L_18290001 RAL-426 530 chr2L 18305611 18305642 chr2L 18305719 18305750 4 105 8.0 9.5 8.8 0.4 139 chr2L 18305611 intergenic not near genes chr2L 18305680 intergenic not near genes chr2L 18305750 intergenic not near genes chr2L_4_18305001 chr2L_18305001 RAL-426 531 chr2L 18342160 18342197 chr2L 18342253 18342296 10 95 11.0 9.5 10.2 0.9 136 chr2L 18342160 intron Fas3 + chr2L 18342228 intron Fas3 + chr2L 18342296 intron Fas3 + chr2L_10_18340001 chr2L_18340001 RAL-426 532 chr2L 18380192 18380240 chr2L 18380300 18380347 5 107 13.0 18.0 15.5 0.3 155 chr2L 18380192 intron Fas3 + chr2L 18380270 intron Fas3 + chr2L 18380347 intron Fas3 + chr2L_5_18380001 chr2L_18380001 RAL-426 533 chr2L 18400199 18400240 chr2L 18400470 18400511 5 271 3.5 11.0 7.2 0.6 312 chr2L 18400199 intergenic CR44486 + chr2L 18400355 intergenic CR44486 + chr2L 18400511 5` UTR CR44486 + chr2L_5_18400001 chr2L_18400001 RAL-426 534 chr2L 18639965 18639993 chr2L 18640577 18640605 5 611 12.0 10.5 11.2 0.4 640 chr2L 18639965 intron MESR3 + chr2L 18640285 intron MESR3 + chr2L 18640605 intron MESR3 + chr2L_5_18640001 chr2L_18640001 RAL-426 535 chr2L 18659921 18659960 chr2L 18660020 18660064 5 96 11.5 10.0 10.8 0.4 143 chr2L 18659921 intron MESR3 + chr2L 18659992 intron MESR3 + chr2L 18660064 intron MESR3 + chr2L_5_18655001 chr2L_18655001 RAL-426 536 chr2L 18755902 18755948 chr2L 18756153 18756199 5 250 4.5 10.5 7.5 0.6 297 chr2L 18755902 intergenic not near genes chr2L 18756050 intergenic not near genes chr2L 18756199 intergenic not near genes chr2L_5_18755001 chr2L_18755001 RAL-426 537 chr2L 18811402 18811430 chr2L 18811504 18811532 5 102 6.0 5.0 5.5 0.8 130 chr2L 18811402 intergenic CG10570 -,CG42502 - chr2L 18811467 intergenic CG10570 -,CG42502 - chr2L 18811532 intergenic not near genes chr2L_5_18810001 chr2L_18810001 RAL-426 538 chr2L 18811658 18811684 chr2L 18811878 18811913 4 226 9.5 6.5 8.0 0.4 255 chr2L 18811658 intergenic not near genes chr2L 18811786 intergenic not near genes chr2L 18811913 intergenic not near genes chr2L_4_18810001 chr2L_18810001 RAL-426 539 chr2L 18812553 18812588 chr2L 18812836 18812871 7 283 5.0 9.5 7.2 0.9 318 chr2L 18812553 intergenic CG17325 +,CG42305 + chr2L 18812712 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812871 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_7_18810001 chr2L_18810001 RAL-426 540 chr2L 18898401 18898422 chr2L 18898477 18898524 5 88 9.5 6.5 8.0 0.6 123 chr2L 18898401 intergenic not near genes chr2L 18898462 intergenic not near genes chr2L 18898524 intergenic not near genes chr2L_5_18895001 chr2L_18895001 RAL-426 541 chr2L 18902621 18902654 chr2L 18902904 18902955 9 295 1.0 0.5 0.8 5.0 334 chr2L 18902621 intergenic not near genes chr2L 18902788 intergenic not near genes chr2L 18902955 intergenic not near genes chr2L_9_18900001 chr2L_18900001 RAL-426 542 chr2L 18926583 18926593 chr2L 18926709 18926720 5 127 2.0 2.5 2.2 1.6 137 chr2L 18926583 intron ssp3 - chr2L 18926652 intron ssp3 - chr2L 18926720 intron ssp3 - chr2L_5_18925001 chr2L_18925001 RAL-426 543 chr2L 18986510 18986560 chr2L 18986630 18986670 8 116 8.5 7.5 8.0 0.9 160 chr2L 18986510 intron Swip-1 - chr2L 18986590 intron Swip-1 - chr2L 18986670 intron Swip-1 - chr2L_8_18985001 chr2L_18985001 RAL-426 544 chr2L 18995416 18995431 chr2L 18995516 18995525 7 99 18.0 12.5 15.2 0.4 109 chr2L 18995416 intron CG10650 - chr2L 18995470 intron CG10650 - chr2L 18995525 intron CG10650 - chr2L_7_18995001 chr2L_18995001 RAL-426 545 chr2L 19077273 19077306 chr2L 19078734 19078766 7 1460 9.5 10.5 10.0 0.6 1493 chr2L 19077273 intergenic CG10700 - chr2L 19078020 exon CG10700 - chr2L 19078766 exon CG10700 - chr2L_7_19075001 chr2L_19075001 RAL-426 546 chr2L 19147369 19147402 chr2L 19154403 19154430 297 6 7047 2.0 2.0 2.0 2.0 7061 chr2L 19147369 intron brat + chr2L 19150900 intron brat + chr2L 19154430 intron brat + chr2L_6_19150001 chr2L_19150001 RAL-426 547 chr2L 19163347 19163379 chr2L 19163447 19163479 7 100 15.0 12.0 13.5 0.5 132 chr2L 19163347 intron brat + chr2L 19163413 intron brat + chr2L 19163479 intron brat + chr2L_7_19160001 chr2L_19160001 RAL-426 548 chr2L 19189951 19189985 chr2L 19190125 19190138 7 170 5.5 8.0 6.8 0.9 187 chr2L 19189951 intergenic pigeon +,drl + chr2L 19190044 intergenic pigeon +,drl + chr2L 19190138 intergenic pigeon +,drl + chr2L_7_19190001 chr2L_19190001 RAL-426 549 chr2L 19209632 19209649 chr2L 19209737 19209754 4 104 6.5 11.5 9.0 0.4 122 chr2L 19209632 intergenic not near genes chr2L 19209693 intergenic not near genes chr2L 19209754 intergenic not near genes chr2L_4_19205001 chr2L_19205001 RAL-426 550 chr2L 19211231 19211271 chr2L 19211359 19211401 8 129 4.5 6.5 5.5 1.2 170 chr2L 19211231 intergenic not near genes chr2L 19211316 intergenic not near genes chr2L 19211401 intergenic not near genes chr2L_8_19210001 chr2L_19210001 RAL-426 551 chr2L 19217853 19217867 chr2L 19217956 19217961 4 99 11.0 4.0 7.5 0.5 108 chr2L 19217853 5` UTR CR44189 + chr2L 19217907 5` UTR CR44189 + chr2L 19217961 5` UTR CR44189 + chr2L_4_19215001 chr2L_19215001 RAL-426 552 chr2L 19218476 19218494 chr2L 19218560 19218569 4 84 10.0 12.5 11.2 0.3 93 chr2L 19218476 intergenic CR44189 + chr2L 19218522 intergenic CR44189 + chr2L 19218569 intergenic CR44189 + chr2L_4_19215001 chr2L_19215001 RAL-426 553 chr2L 19220092 19220125 chr2L 19220232 19220265 5 140 16.0 10.0 13.0 0.4 173 chr2L 19220092 intergenic not near genes chr2L 19220178 intergenic not near genes chr2L 19220265 intergenic not near genes chr2L_5_19220001 chr2L_19220001 RAL-426 554 chr2L 19345014 19345045 chr2L 19357231 19357247 blood 11 12223 3.5 5.5 4.5 2.0 12233 chr2L 19345014 intron dnt - chr2L 19351130 intron dnt - chr2L 19357247 intron dnt - chr2L_11_19350001 chr2L_19350001 RAL-426 555 chr2L 19357534 19357567 chr2L 19357636 19357656 12 103 3.5 9.0 6.2 1.7 122 chr2L 19357534 intron dnt - chr2L 19357595 intron dnt - chr2L 19357656 intron dnt - chr2L_12_19355001 chr2L_19355001 RAL-426 556 chr2L 19367478 19367515 chr2L 19367574 19367615 18 96 8.5 5.0 6.8 2.3 137 chr2L 19367478 intergenic not near genes chr2L 19367546 intergenic not near genes chr2L 19367615 intergenic not near genes chr2L_18_19365001 chr2L_19365001 RAL-426 557 chr2L 19374478 19374518 chr2L 19374606 19374638 7 125 10.5 9.5 10.0 0.6 160 chr2L 19374478 intergenic not near genes chr2L 19374558 intergenic not near genes chr2L 19374638 intergenic not near genes chr2L_7_19370001 chr2L_19370001 RAL-426 558 chr2L 19383993 19384014 chr2L 19384090 19384131 4 100 6.0 7.0 6.5 0.5 138 chr2L 19383993 exon fon - chr2L 19384062 exon fon - chr2L 19384131 exon fon - chr2L_4_19380001 chr2L_19380001 RAL-426 559 chr2L 19405599 19405640 chr2L 19405708 19405738 12 105 1.0 1.5 1.2 5.5 139 chr2L 19405599 intron Pax - chr2L 19405668 intron Pax - chr2L 19405738 intron Pax - chr2L_12_19405001 chr2L_19405001 RAL-426 560 chr2L 19407700 19407725 chr2L 19407917 19407942 8 214 4.0 4.0 4.0 1.6 242 chr2L 19407700 intron Pax - chr2L 19407821 intron Pax - chr2L 19407942 intron Pax - chr2L_8_19405001 chr2L_19405001 RAL-426 561 chr2L 19437505 19437531 chr2L 19437617 19437643 14 111 3.0 3.0 3.0 3.5 138 chr2L 19437505 intron CG10237 - chr2L 19437574 intron CG10237 - chr2L 19437643 intron CG10237 - chr2L_14_19435001 chr2L_19435001 RAL-426 562 chr2L 19464471 19464507 chr2L 19464552 19464595 8 90 13.5 12.5 13.0 0.6 124 chr2L 19464471 5` UTR tj + chr2L 19464533 5` UTR tj + chr2L 19464595 5` UTR tj + chr2L_8_19460001 chr2L_19460001 RAL-426 563 chr2L 19487202 19487237 chr2L 19487292 19487346 7 102 11.0 8.0 9.5 0.7 144 chr2L 19487202 intergenic CG13083 + chr2L 19487274 intergenic CG13083 + chr2L 19487346 intergenic CG13083 + chr2L_7_19485001 chr2L_19485001 RAL-426 564 chr2L 19520166 19520181 chr2L 19520265 19520278 7 97 4.0 3.5 3.8 1.5 112 chr2L 19520166 intron CG10132 + chr2L 19520222 intron CG10132 + chr2L 19520278 intron CG10132 + chr2L_7_19520001 chr2L_19520001 RAL-426 565 chr2L 19543114 19543159 chr2L 19543218 19543263 8 101 9.5 8.0 8.8 0.8 149 chr2L 19543114 intron ref(2)P + chr2L 19543188 intron ref(2)P + chr2L 19543263 intron ref(2)P + chr2L_8_19540001 chr2L_19540001 RAL-426 566 chr2L 19559984 19560032 chr2L 19560257 19560285 4 267 12.0 14.5 13.2 0.3 301 chr2L 19559984 exon Tep5 + chr2L 19560134 exon Tep5 + chr2L 19560285 intron Tep5 + chr2L_4_19560001 chr2L_19560001 RAL-426 567 chr2L 19560828 19560862 chr2L 19560928 19560947 4 96 10.5 11.5 11.0 0.3 119 chr2L 19560828 intron Tep5 + chr2L 19560888 exon Tep5 + chr2L 19560947 exon Tep5 + chr2L_4_19560001 chr2L_19560001 RAL-426 568 chr2L 19562543 19562554 chr2L 19562643 19562646 5 98 7.0 13.5 10.2 0.4 103 chr2L 19562543 intron Tep5 + chr2L 19562594 intron Tep5 + chr2L 19562646 exon Tep5 + chr2L_5_19560001 chr2L_19560001 RAL-426 569 chr2L 19620079 19620132 chr2L 19621083 19621122 jockey 15 996 5.0 6.0 5.5 2.3 1043 chr2L 19620079 intron Lar + chr2L 19620600 intron Lar + chr2L 19621122 intron Lar + chr2L_15_19620001 chr2L_19620001 RAL-426 570 chr2L 19652557 19652600 chr2L 19674004 19674052 opus 17 21449 4.0 2.5 3.2 4.0 21495 chr2L 19652557 intron Lar + chr2L 19663304 intron Lar + chr2L 19674052 intron Lar + chr2L_17_19660001 chr2L_19660001 RAL-426 571 chr2L 19690330 19690355 chr2L 19690409 19690428 4 84 6.0 6.0 6.0 0.6 98 chr2L 19690330 intron Lar + chr2L 19690379 intron Lar + chr2L 19690428 intron Lar + chr2L_4_19690001 chr2L_19690001 RAL-426 572 chr2L 19703526 19703563 chr2L 19712681 19712719 roo 19 9152 5.5 7.0 6.2 2.6 9193 chr2L 19703526 intron Lar + chr2L 19708122 intron Lar + chr2L 19712719 intron Lar + chr2L_19_19705001 chr2L_19705001 RAL-426 573 chr2L 19737348 19737367 chr2L 19740823 19740832 1360 8 3469 8.5 5.5 7.0 1.0 3484 chr2L 19737348 intergenic Nf-YB + chr2L 19739090 intergenic not near genes chr2L 19740832 intergenic not near genes chr2L_8_19735001 chr2L_19735001 RAL-426 574 chr2L 19737369 19737389 chr2L 19740820 19740831 1360 10 3456 5.0 4.5 4.8 1.7 3462 chr2L 19737369 intergenic Nf-YB + chr2L 19739100 intergenic not near genes chr2L 19740831 intergenic not near genes chr2L_10_19735001 chr2L_19735001 RAL-426 575 chr2L 19762790 19762833 chr2L 19763050 19763094 pogo 10 259 3.5 1.0 2.2 3.1 304 chr2L 19762790 5` UTR fbp - chr2L 19762942 intron fbp - chr2L 19763094 intron fbp - chr2L_10_19760001 chr2L_19760001 RAL-426 576 chr2L 19772320 19772354 chr2L 19772432 19772456 5 110 8.0 9.0 8.5 0.5 136 chr2L 19772320 intergenic not near genes chr2L 19772388 intergenic not near genes chr2L 19772456 intergenic not near genes chr2L_5_19770001 chr2L_19770001 RAL-426 577 chr2L 19776642 19776658 chr2L 19776742 19776758 8 96 8.0 4.5 6.2 1.1 116 chr2L 19776642 3` UTR CdGAPr - chr2L 19776700 3` UTR CdGAPr - chr2L 19776758 3` UTR CdGAPr - chr2L_8_19775001 chr2L_19775001 RAL-426 578 chr2L 19823256 19823298 chr2L 19823351 19823400 5 104 10.5 7.5 9.0 0.5 144 chr2L 19823256 intron sick + chr2L 19823328 intron sick + chr2L 19823400 intron sick + chr2L_5_19820001 chr2L_19820001 RAL-426 579 chr2L 19837259 19837305 chr2L 19837359 19837386 9 98 13.5 14.5 14.0 0.6 127 chr2L 19837259 intron sick + chr2L 19837322 intron sick + chr2L 19837386 intron sick + chr2L_9_19835001 chr2L_19835001 RAL-426 580 chr2L 19901471 19901505 chr2L 19901594 19901627 4 122 8.5 6.5 7.5 0.5 156 chr2L 19901471 intron sick + chr2L 19901549 intron sick + chr2L 19901627 intron sick + chr2L_4_19900001 chr2L_19900001 RAL-426 581 chr2L 19911273 19911311 chr2L 19911381 19911419 4 106 11.0 13.5 12.2 0.3 146 chr2L 19911273 intron,3` UTR sick +,CR43097 - chr2L 19911346 intron,3` UTR sick +,CR43097 - chr2L 19911419 intron,3` UTR sick +,CR43097 - chr2L_4_19910001 chr2L_19910001 RAL-426 582 chr2L 19941494 19941516 chr2L 19941603 19941619 4 107 6.5 2.0 4.2 0.8 125 chr2L 19941494 intron sick + chr2L 19941556 intron sick + chr2L 19941619 intron sick + chr2L_4_19940001 chr2L_19940001 RAL-426 583 chr2L 19947690 19947732 chr2L 19947796 19947833 5 104 6.0 9.5 7.8 0.6 143 chr2L 19947690 intron sick + chr2L 19947762 intron sick + chr2L 19947833 intron sick + chr2L_5_19945001 chr2L_19945001 RAL-426 584 chr2L 20005855 20005901 chr2L 20010951 20010997 flea 6 5094 1.5 2.5 2.0 2.0 5142 chr2L 20005855 intron CG43861 - chr2L 20008426 intron CG43861 - chr2L 20010997 intron CG43861 - chr2L_6_20005001 chr2L_20005001 RAL-426 585 chr2L 20022070 20022096 chr2L 20022203 20022229 5 133 10.0 7.5 8.8 0.5 159 chr2L 20022070 intergenic not near genes chr2L 20022150 intergenic not near genes chr2L 20022229 intergenic not near genes chr2L_5_20020001 chr2L_20020001 RAL-426 586 chr2L 20026588 20026627 chr2L 20026690 20026720 10 100 12.0 10.5 11.2 0.8 132 chr2L 20026588 intergenic not near genes chr2L 20026654 intergenic not near genes chr2L 20026720 intergenic not near genes chr2L_10_20025001 chr2L_20025001 RAL-426 587 chr2L 20041411 20041454 chr2L 20041514 20041557 9 98 14.0 11.0 12.5 0.7 146 chr2L 20041411 intron sNPF + chr2L 20041484 intron sNPF + chr2L 20041557 intron sNPF + chr2L_9_20040001 chr2L_20040001 RAL-426 588 chr2L 20079496 20079543 chr2L 20079636 20079684 5 136 11.0 6.5 8.8 0.5 188 chr2L 20079496 intron,intron neb +,fok - chr2L 20079590 intron,intron neb +,fok - chr2L 20079684 intron,intron neb +,fok - chr2L_5_20075001 chr2L_20075001 RAL-426 589 chr2L 20098704 20098727 chr2L 20099007 20099031 8 304 8.0 9.5 8.8 0.8 327 chr2L 20098704 intron Kua + chr2L 20098868 intron Kua + chr2L 20099031 intron Kua + chr2L_8_20095001 chr2L_20095001 RAL-426 590 chr2L 20226248 20226288 chr2L 20226350 20226379 6 96 8.5 9.5 9.0 0.6 131 chr2L 20226248 intergenic not near genes chr2L 20226314 intergenic not near genes chr2L 20226379 intergenic not near genes chr2L_6_20225001 chr2L_20225001 RAL-426 591 chr2L 20236492 20236529 chr2L 20236588 20236625 5 96 13.0 10.0 11.5 0.4 133 chr2L 20236492 intergenic not near genes chr2L 20236558 intergenic not near genes chr2L 20236625 intergenic not near genes chr2L_5_20235001 chr2L_20235001 RAL-426 592 chr2L 20272098 20272140 chr2L 20282826 20282871 copia 14 10728 7.5 8.5 8.0 1.6 10773 chr2L 20272098 intergenic not near genes chr2L 20277484 intergenic not near genes chr2L 20282871 intergenic not near genes chr2L_14_20275001 chr2L_20275001 RAL-426 593 chr2L 20294289 20294299 chr2L 20294398 20294408 4 109 10.5 11.5 11.0 0.3 119 chr2L 20294289 intergenic CG12617 + chr2L 20294348 intergenic CG12617 + chr2L 20294408 intergenic CG12617 + chr2L_4_20290001 chr2L_20290001 RAL-426 594 chr2L 20294310 20294333 chr2L 20294393 20294442 5 102 8.5 10.0 9.2 0.5 132 chr2L 20294310 intergenic CG12617 + chr2L 20294376 intergenic CG12617 + chr2L 20294442 intergenic CG12617 + chr2L_5_20290001 chr2L_20290001 RAL-426 595 chr2L 20296488 20296541 chr2L 20296587 20296641 6 97 3.0 3.0 3.0 1.5 153 chr2L 20296488 intergenic CR43414 - chr2L 20296564 intergenic CR43414 - chr2L 20296641 intergenic CR43414 - chr2L_6_20295001 chr2L_20295001 RAL-426 596 chr2L 20298816 20298852 chr2L 20298919 20298955 5 101 12.0 17.0 14.5 0.3 139 chr2L 20298816 intergenic not near genes chr2L 20298886 intergenic not near genes chr2L 20298955 intergenic not near genes chr2L_5_20295001 chr2L_20295001 RAL-426 597 chr2L 20299418 20299440 chr2L 20299558 20299583 8 134 14.0 21.5 17.8 0.4 165 chr2L 20299418 intergenic not near genes chr2L 20299500 intergenic not near genes chr2L 20299583 intergenic not near genes chr2L_8_20295001 chr2L_20295001 RAL-426 598 chr2L 20310882 20310920 chr2L 20310972 20310995 8 95 1.0 3.5 2.2 2.5 113 chr2L 20310882 intergenic spir + chr2L 20310938 intergenic spir + chr2L 20310995 intergenic spir + chr2L_8_20310001 chr2L_20310001 RAL-426 599 chr2L 20312720 20312760 chr2L 20313040 20313070 4 312 9.0 13.0 11.0 0.3 350 chr2L 20312720 intron spir + chr2L 20312895 intron spir + chr2L 20313070 intron spir + chr2L_4_20310001 chr2L_20310001 RAL-426 600 chr2L 20315688 20315730 chr2L 20315799 20315832 12 109 12.0 13.0 12.5 0.9 144 chr2L 20315688 intron spir + chr2L 20315760 intron spir + chr2L 20315832 intron spir + chr2L_12_20315001 chr2L_20315001 RAL-426 601 chr2L 20372198 20372256 chr2L 20372468 20372472 pogo 7 262 0.5 8.0 4.2 1.3 274 chr2L 20372198 intergenic Ugt37a1 - chr2L 20372335 intergenic Ugt37a1 - chr2L 20372472 3` UTR Ugt37a1 - chr2L_7_20370001 chr2L_20370001 RAL-426 602 chr2L 20376185 20376223 chr2L 20377465 20377494 5 1276 22.5 7.0 14.8 0.3 1309 chr2L 20376185 intergenic not near genes chr2L 20376840 intergenic CG16798 - chr2L 20377494 exon CG16798 - chr2L_5_20375001 chr2L_20375001 RAL-426 603 chr2L 20395472 20395510 chr2L 20395672 20395710 7 199 11.5 8.0 9.8 0.6 238 chr2L 20395472 intron CG10947 - chr2L 20395591 intron CG10947 - chr2L 20395710 intron CG10947 - chr2L_7_20395001 chr2L_20395001 RAL-426 604 chr2L 20498007 20498055 chr2L 20498123 20498168 15 113 13.0 15.0 14.0 1.0 161 chr2L 20498007 intergenic not near genes chr2L 20498088 intergenic not near genes chr2L 20498168 intergenic not near genes chr2L_15_20495001 chr2L_20495001 RAL-426 605 chr2L 20498673 20498708 chr2L 20498791 20498827 16 116 4.0 6.0 5.0 2.7 154 chr2L 20498673 intergenic not near genes chr2L 20498750 intergenic not near genes chr2L 20498827 intergenic not near genes chr2L_16_20495001 chr2L_20495001 RAL-426 606 chr2L 20549121 20549156 chr2L 20549219 20549258 7 101 15.5 11.0 13.2 0.5 137 chr2L 20549121 intergenic not near genes chr2L 20549190 intergenic not near genes chr2L 20549258 intergenic not near genes chr2L_7_20545001 chr2L_20545001 RAL-426 607 chr2L 20550615 20550671 chr2L 20550716 20550762 4 98 0.5 3.0 1.8 1.4 147 chr2L 20550615 intergenic not near genes chr2L 20550688 intergenic not near genes chr2L 20550762 intergenic not near genes chr2L_4_20550001 chr2L_20550001 RAL-426 608 chr2L 20553168 20553220 chr2L 20553263 20553312 10 95 5.5 4.5 5.0 1.7 144 chr2L 20553168 intergenic not near genes chr2L 20553240 intergenic not near genes chr2L 20553312 intergenic not near genes chr2L_10_20550001 chr2L_20550001 RAL-426 609 chr2L 20563535 20563561 chr2L 20563632 20563658 8 95 10.5 9.5 10.0 0.7 123 chr2L 20563535 intron CR45347 + chr2L 20563596 intron CR45347 + chr2L 20563658 intron CR45347 + chr2L_8_20560001 chr2L_20560001 RAL-426 610 chr2L 20568642 20568687 chr2L 20569052 20569097 X-element 12 408 6.0 4.0 5.0 2.0 455 chr2L 20568642 intron CR45347 + chr2L 20568870 intron CR45347 + chr2L 20569097 intron CR45347 + chr2L_12_20565001 chr2L_20565001 RAL-426 611 chr2L 20576199 20576232 chr2L 20583688 20583721 blood 11 7486 7.0 4.5 5.8 1.6 7522 chr2L 20576199 intergenic CR45347 + chr2L 20579960 intergenic not near genes chr2L 20583721 3` UTR CR44909 - chr2L_11_20575001 chr2L_20575001 RAL-426 612 chr2L 20576233 20576249 chr2L 20583686 20583737 blood 5 7476 5.0 4.0 4.5 0.9 7504 chr2L 20576233 intergenic not near genes chr2L 20579985 intergenic not near genes chr2L 20583737 3` UTR CR44909 - chr2L_5_20575001 chr2L_20575001 RAL-426 613 chr2L 20601769 20601813 chr2L 20601867 20601911 6 96 3.5 3.0 3.2 1.4 142 chr2L 20601769 intron CR44909 - chr2L 20601840 intron CR44909 - chr2L 20601911 intron CR44909 - chr2L_6_20600001 chr2L_20600001 RAL-426 614 chr2L 20602727 20602749 chr2L 20602835 20602857 6 108 1.0 5.0 3.0 1.5 130 chr2L 20602727 intron CR44909 - chr2L 20602792 intron CR44909 - chr2L 20602857 intron CR44909 - chr2L_6_20600001 chr2L_20600001 RAL-426 615 chr2L 20639490 20639522 chr2L 20639786 20639813 INE-1 4 294 7.0 8.0 7.5 0.5 323 chr2L 20639490 intergenic not near genes chr2L 20639652 intergenic CG31680 + chr2L 20639813 intergenic CG31680 + chr2L_4_20635001 chr2L_20635001 RAL-426 616 chr2L 20668671 20668705 chr2L 20668766 20668798 4 95 12.5 12.5 12.5 0.3 127 chr2L 20668671 intron CG31678 - chr2L 20668734 intron CG31678 - chr2L 20668798 intron CG31678 - chr2L_4_20665001 chr2L_20665001 RAL-426 617 chr2L 20674813 20674863 chr2L 20674916 20674960 7 97 4.5 0.0 2.2 2.2 147 chr2L 20674813 intron CG31678 - chr2L 20674886 intron CG31678 - chr2L 20674960 intron CG31678 - chr2L_7_20670001 chr2L_20670001 RAL-426 618 chr2L 20817825 20817850 chr2L 20817924 20817949 5 96 12.0 11.0 11.5 0.4 124 chr2L 20817825 exon CheB38a - chr2L 20817887 exon CheB38a - chr2L 20817949 exon CheB38a - chr2L_5_20815001 chr2L_20815001 RAL-426 619 chr2L 20821493 20821509 chr2L 20821649 20821677 7 166 8.5 2.0 5.2 1.1 184 chr2L 20821493 intergenic not near genes chr2L 20821585 intergenic not near genes chr2L 20821677 intergenic not near genes chr2L_7_20820001 chr2L_20820001 RAL-426 620 chr2L 20835796 20835837 chr2L 20836533 20836574 Quasimodo 9 736 3.5 4.0 3.8 1.9 778 chr2L 20835796 5` UTR Oseg5 - chr2L 20836185 intergenic Oseg5 -,Spn38F - chr2L 20836574 intergenic Spn38F - chr2L_9_20835001 chr2L_20835001 RAL-426 621 chr2L 20840045 20840056 chr2L 20840243 20840246 4 212 9.0 6.5 7.8 0.5 201 chr2L 20840045 intergenic not near genes chr2L 20840146 intergenic not near genes chr2L 20840246 intergenic not near genes chr2L_4_20840001 chr2L_20840001 RAL-426 622 chr2L 20891531 20891543 chr2L 20896642 20896648 jockey 8 5114 1.5 4.5 3.0 2.0 5117 chr2L 20891531 intron,intron CG43739 -,sky - chr2L 20894090 intron,intron CG43739 -,sky - chr2L 20896648 intron,intron CG43739 -,sky - chr2L_8_20890001 chr2L_20890001 RAL-426 623 chr2L 20901434 20901485 chr2L 20902618 20902668 1360 7 1177 1.5 0.0 0.8 3.9 1234 chr2L 20901434 intron,intron CG43739 -,sky - chr2L 20902051 intron,intron CG43739 -,sky - chr2L 20902668 intron,intron CG43739 -,sky - chr2L_7_20900001 chr2L_20900001 RAL-426 624 chr2L 20946925 20946958 chr2L 20947032 20947065 9 104 6.0 4.5 5.2 1.5 140 chr2L 20946925 intergenic CR44606 - chr2L 20946995 intergenic CR44606 - chr2L 20947065 intergenic CR44606 - chr2L_9_20945001 chr2L_20945001 RAL-426 625 chr2L 20967069 20967096 chr2L 20967175 20967202 4 106 10.0 13.0 11.5 0.3 133 chr2L 20967069 3` UTR CG42238 - chr2L 20967136 3` UTR CG42238 - chr2L 20967202 3` UTR CG42238 - chr2L_4_20965001 chr2L_20965001 RAL-426 626 chr2L 20968292 20968332 chr2L 20968472 20968511 8 178 8.0 14.5 11.2 0.7 219 chr2L 20968292 intron CG42238 - chr2L 20968402 intron CG42238 - chr2L 20968511 intron CG42238 - chr2L_8_20965001 chr2L_20965001 RAL-426 627 chr2L 20976640 20976672 chr2L 20981475 20981490 X-element 8 4833 4.5 8.5 6.5 1.1 4850 chr2L 20976640 intron CG42238 - chr2L 20979065 intron CG42238 - chr2L 20981490 intron CG42238 - chr2L_8_20975001 chr2L_20975001 RAL-426 628 chr2L 20984734 20984765 chr2L 20984838 20984864 4 96 13.5 12.5 13.0 0.3 130 chr2L 20984734 intron CG42238 - chr2L 20984799 intron CG42238 - chr2L 20984864 intron CG42238 - chr2L_4_20980001 chr2L_20980001 RAL-426 629 chr2L 20991036 20991064 chr2L 20991132 20991161 5 97 15.0 15.0 15.0 0.3 125 chr2L 20991036 intron CG42238 - chr2L 20991098 intron CG42238 - chr2L 20991161 intron CG42238 - chr2L_5_20990001 chr2L_20990001 RAL-426 630 chr2L 21020266 21020305 chr2L 21023953 21023998 NOF 11 3684 4.5 3.5 4.0 2.2 3732 chr2L 21020266 intron CG42238 - chr2L 21022132 intron CG42238 - chr2L 21023998 intron CG42238 - chr2L_11_21020001 chr2L_21020001 RAL-426 631 chr2L 21041134 21041154 chr2L 21049401 21049434 Tirant 6 8276 6.5 5.5 6.0 0.9 8300 chr2L 21041134 intron CG42238 - chr2L 21045284 intron CG42238 - chr2L 21049434 intron CG42238 - chr2L_6_21045001 chr2L_21045001 RAL-426 632 chr2L 21106011 21106053 chr2L 21106104 21106153 6 100 6.5 8.0 7.2 0.7 142 chr2L 21106011 intron Nhe2 + chr2L 21106082 intron Nhe2 + chr2L 21106153 intron Nhe2 + chr2L_6_21105001 chr2L_21105001 RAL-426 633 chr2L 21133759 21133795 chr2L 21133897 21133933 8 138 7.5 11.5 9.5 0.8 174 chr2L 21133759 intergenic not near genes chr2L 21133846 intergenic not near genes chr2L 21133933 intergenic not near genes chr2L_8_21130001 chr2L_21130001 RAL-426 634 chr2L 21193320 21193373 chr2L 21193424 21193471 8 99 14.0 14.5 14.2 0.5 151 chr2L 21193320 intron Ret - chr2L 21193396 intron Ret - chr2L 21193471 intron Ret - chr2L_8_21190001 chr2L_21190001 RAL-426 635 chr2L 21347532 21347576 chr2L 21355024 21355068 blood 11 7489 2.0 2.5 2.2 3.4 7536 chr2L 21347532 intron Tsp39D + chr2L 21351300 intron Tsp39D + chr2L 21355068 intron Tsp39D + chr2L_11_21350001 chr2L_21350001 RAL-426 636 chr2L 21362589 21362644 chr2L 21362701 21362742 5 109 5.0 7.5 6.2 0.7 153 chr2L 21362589 intron dtr + chr2L 21362666 intron dtr + chr2L 21362742 intron dtr + chr2L_5_21360001 chr2L_21360001 RAL-426 637 chr2L 21597040 21597051 chr2L 21604779 21604815 roo 6 7759 4.0 5.5 4.8 1.0 7775 chr2L 21597040 intergenic not near genes chr2L 21600928 intergenic not near genes chr2L 21604815 intergenic not near genes chr2L_6_21600001 chr2L_21600001 RAL-426 638 chr2L 21653186 21653213 chr2L 21656510 21656537 invader4 7 3324 14.0 11.5 12.8 0.5 3351 chr2L 21653186 intergenic not near genes chr2L 21654862 intergenic not near genes chr2L 21656537 intergenic not near genes chr2L_7_21650001 chr2L_21650001 RAL-426 639 chr2L 21685768 21685812 chr2L 21685864 21685905 8 92 10.5 8.0 9.2 0.8 137 chr2L 21685768 intron CG31619 + chr2L 21685836 intron CG31619 + chr2L 21685905 intron CG31619 + chr2L_8_21685001 chr2L_21685001 RAL-426 640 chr2L 21691809 21691833 chr2L 21698297 21698323 Burdock 9 6488 3.5 0.0 1.8 3.2 6514 chr2L 21691809 intron CG31619 + chr2L 21695066 intron CG31619 + chr2L 21698323 intron CG31619 + chr2L_9_21695001 chr2L_21695001 RAL-426 641 chr2L 21725925 21725939 chr2L 21726025 21726042 6 101 18.0 11.5 14.8 0.4 117 chr2L 21725925 intron CG31619 + chr2L 21725984 intron CG31619 + chr2L 21726042 intron CG31619 + chr2L_6_21725001 chr2L_21725001 RAL-426 642 chr2L 21754651 21754687 chr2L 21754752 21754788 6 100 2.5 3.5 3.0 1.5 137 chr2L 21754651 intron step - chr2L 21754720 intron step - chr2L 21754788 intron step - chr2L_6_21750001 chr2L_21750001 RAL-426 643 chr2L 21755474 21755494 chr2L 21755618 21755636 5 143 8.5 3.5 6.0 0.7 162 chr2L 21755474 intron step - chr2L 21755555 intron step - chr2L 21755636 intron step - chr2L_5_21755001 chr2L_21755001 RAL-426 644 chr2L 21755496 21755524 chr2L 21755616 21755668 9 136 2.5 3.5 3.0 2.2 172 chr2L 21755496 intron step - chr2L 21755582 intron step - chr2L 21755668 intron step - chr2L_9_21755001 chr2L_21755001 RAL-426 645 chr2L 21757572 21757587 chr2L 21757673 21757688 4 97 7.0 5.5 6.2 0.6 116 chr2L 21757572 intergenic step -,CG1416 + chr2L 21757630 intergenic step -,CG1416 + chr2L 21757688 intergenic step -,CG1416 + chr2L_4_21755001 chr2L_21755001 RAL-426 646 chr2L 21806210 21806255 chr2L 21806332 21806359 4 116 9.5 11.5 10.5 0.3 149 chr2L 21806210 intergenic not near genes chr2L 21806284 intergenic not near genes chr2L 21806359 intergenic not near genes chr2L_4_21805001 chr2L_21805001 RAL-426 647 chr2L 21825152 21825171 chr2L 21825584 21825620 5 443 11.5 10.0 10.8 0.4 468 chr2L 21825152 intergenic not near genes chr2L 21825386 intergenic not near genes chr2L 21825620 intergenic not near genes chr2L_5_21825001 chr2L_21825001 RAL-426 648 chr2L 21836394 21836424 chr2L 21836489 21836526 4 98 8.0 13.0 10.5 0.3 132 chr2L 21836394 3` UTR tsh + chr2L 21836460 3` UTR tsh + chr2L 21836526 3` UTR tsh + chr2L_4_21835001 chr2L_21835001 RAL-426 649 chr2L 21855459 21855504 chr2L 21855561 21855611 9 105 4.0 2.5 3.2 2.1 152 chr2L 21855459 intron CR44917 + chr2L 21855535 intron CR44917 + chr2L 21855611 intron CR44917 + chr2L_9_21855001 chr2L_21855001 RAL-426 650 chr2L 21859303 21859348 chr2L 21859403 21859448 13 99 3.0 5.5 4.2 2.5 145 chr2L 21859303 intron CR44917 + chr2L 21859376 intron CR44917 + chr2L 21859448 intron CR44917 + chr2L_13_21855001 chr2L_21855001 RAL-426 651 chr2L 21934575 21934587 chr2L 21934700 21934702 4 126 8.0 7.0 7.5 0.5 127 chr2L 21934575 intergenic not near genes chr2L 21934638 intergenic not near genes chr2L 21934702 intergenic not near genes chr2L_4_21930001 chr2L_21930001 RAL-426 652 chr2L 21953801 21953829 chr2L 21954682 21954710 4 881 21.0 28.5 24.8 0.2 909 chr2L 21953801 intergenic not near genes chr2L 21954256 intergenic not near genes chr2L 21954710 intergenic not near genes chr2L_4_21950001 chr2L_21950001 RAL-426 653 chr2L 21981667 21981677 chr2L 21990852 21990862 roo 4 9185 9.5 7.0 8.2 0.4 9195 chr2L 21981667 exon CG2528 - chr2L 21986264 intron CG2528 - chr2L 21990862 exon CG2528 - chr2L_4_21985001 chr2L_21985001 RAL-426 654 chr2L 21981679 21981706 chr2L 21990845 21990886 roo 10 9174 4.5 5.5 5.0 1.7 9207 chr2L 21981679 exon CG2528 - chr2L 21986282 intron CG2528 - chr2L 21990886 exon CG2528 - chr2L_10_21985001 chr2L_21985001 RAL-426 655 chr2L 22011899 22011937 chr2L 22012000 22012030 10 94 2.0 4.0 3.0 2.5 131 chr2L 22011899 intergenic not near genes chr2L 22011964 intergenic not near genes chr2L 22012030 intergenic not near genes chr2L_10_22010001 chr2L_22010001 RAL-426 656 chr2L 22077273 22077303 chr2L 22077374 22077404 6 99 7.5 6.0 6.8 0.8 131 chr2L 22077273 intergenic not near genes chr2L 22077338 intergenic not near genes chr2L 22077404 intergenic not near genes chr2L_6_22075001 chr2L_22075001 RAL-426 657 chr2L 22164965 22164988 chr2L 22165101 22165137 4 138 4.0 7.0 5.5 0.6 172 chr2L 22164965 3` UTR CG42748 + chr2L 22165051 3` UTR CG42748 + chr2L 22165137 3` UTR CG42748 + chr2L_4_22165001 chr2L_22165001 RAL-426 658 chr2L 22192013 22192057 chr2L 22192122 22192159 5 105 9.5 7.5 8.5 0.5 146 chr2L 22192013 intron Ir40a - chr2L 22192086 intron Ir40a - chr2L 22192159 intron Ir40a - chr2L_5_22190001 chr2L_22190001 RAL-426 659 chr2L 22198995 22199045 chr2L 22199105 22199154 5 105 11.5 11.5 11.5 0.4 159 chr2L 22198995 intron Ir40a - chr2L 22199074 intron Ir40a - chr2L 22199154 intron Ir40a - chr2L_5_22195001 chr2L_22195001 RAL-426 660 chr2L 22215896 22215924 chr2L 22216002 22216029 12 103 12.0 11.5 11.8 0.9 133 chr2L 22215896 intergenic not near genes chr2L 22215962 intergenic not near genes chr2L 22216029 intergenic not near genes chr2L_12_22215001 chr2L_22215001 RAL-426 661 chr2L 22239426 22239460 chr2L 22239513 22239554 9 97 13.0 14.5 13.8 0.6 128 chr2L 22239426 3` UTR CR43765 - chr2L 22239490 3` UTR CR43765 - chr2L 22239554 3` UTR CR43765 - chr2L_9_22235001 chr2L_22235001 RAL-426 662 chr2L 22258601 22258643 chr2L 22260744 22260785 G6 10 2142 6.5 19.5 13.0 0.7 2184 chr2L 22258601 intergenic Tif-IA + chr2L 22259693 intergenic not near genes chr2L 22260785 intergenic not near genes chr2L_10_22255001 chr2L_22255001 RAL-426 663 chr2L 22294342 22294386 chr2L 22294450 22294494 6 108 1.0 0.0 0.5 4.0 152 chr2L 22294342 intergenic not near genes chr2L 22294418 intergenic not near genes chr2L 22294494 intergenic not near genes chr2L_6_22290001 chr2L_22290001 RAL-426 664 chr2L 22350270 22350297 chr2L 22350377 22350377 4 107 13.0 14.5 13.8 0.3 107 chr2L 22350270 intron CG17018 + chr2L 22350324 intron CG17018 + chr2L 22350377 intron CG17018 + chr2L_4_22350001 chr2L_22350001 RAL-426 665 chr2L 22490483 22490515 chr2L 22497636 22497643 springer 5 7142 10.5 10.0 10.2 0.4 7160 chr2L 22490483 intergenic not near genes chr2L 22494063 intergenic not near genes chr2L 22497643 intergenic not near genes chr2L_5_22490001 chr2L_22490001 RAL-426 666 chr2L 22510390 22510431 chr2L 22510619 22510640 5 217 18.0 12.5 15.2 0.3 250 chr2L 22510390 intergenic not near genes chr2L 22510515 intergenic not near genes chr2L 22510640 intergenic not near genes chr2L_5_22510001 chr2L_22510001 RAL-426 667 chr2L 22581949 22582000 chr2L 22583758 22583809 S-element 9 1809 4.0 4.5 4.2 1.7 1860 chr2L 22581949 intron CG17494 + chr2L 22582879 intron CG17494 + chr2L 22583809 intron CG17494 + chr2L_9_22580001 chr2L_22580001 RAL-426 668 chr2L 22642649 22642674 chr2L 22642745 22642754 9 94 12.0 11.5 11.8 0.7 105 chr2L 22642649 intron CG40006 - chr2L 22642702 intron CG40006 - chr2L 22642754 intron CG40006 - chr2L_9_22640001 chr2L_22640001 RAL-426 669 chr2L 22706790 22706836 chr2L 22706913 22706959 5 116 6.0 5.5 5.8 0.7 169 chr2L 22706790 intron CG40006 - chr2L 22706874 intron CG40006 - chr2L 22706959 intron CG40006 - chr2L_5_22705001 chr2L_22705001 RAL-426 670 chr2L 22776401 22776451 chr2L 22778210 22778260 S-element 5 1808 3.5 2.5 3.0 1.2 1859 chr2L 22776401 intergenic not near genes chr2L 22777330 intergenic not near genes chr2L 22778260 intergenic not near genes chr2L_5_22775001 chr2L_22775001 RAL-426 671 chr2L 22983932 22983959 chr2L 22984028 22984034 4 91 2.0 3.5 2.8 1.1 102 chr2L 22983932 intron cta + chr2L 22983983 intron cta + chr2L 22984034 intron cta + chr2L_4_22980001 chr2L_22980001 RAL-426 672 chr2R 469943 469976 chr2R 473200 473220 F-element 4 3249 3.0 4.5 3.8 0.8 3277 chr2R 469943 intergenic not near genes chr2R 471582 intergenic not near genes chr2R 473220 intergenic not near genes chr2R_4_470001 chr2R_470001 RAL-426 673 chr2R 529316 529349 chr2R 537946 537988 Max-element 10 8638 3.0 6.0 4.5 1.8 8672 chr2R 529316 intron CG40378 + chr2R 533652 intron CG40378 + chr2R 537988 intron CG40378 + chr2R_10_530001 chr2R_530001 RAL-426 674 chr2R 1082375 1082382 chr2R 1087128 1087175 Doc 6 4765 4.0 3.0 3.5 1.3 4800 chr2R 1082375 intron rl + chr2R 1084775 intron rl + chr2R 1087175 intron rl + chr2R_6_1080001 chr2R_1080001 RAL-426 675 chr2R 1365854 1365894 chr2R 1365976 1366025 4 129 8.5 7.0 7.8 0.5 171 chr2R 1365854 intron l(2)41Ab + chr2R 1365940 intron l(2)41Ab + chr2R 1366025 intron l(2)41Ab + chr2R_4_1365001 chr2R_1365001 RAL-426 676 chr2R 1516588 1516600 chr2R 1521336 1521348 1731 4 4748 11.0 6.5 8.8 0.4 4760 chr2R 1516588 exon Maf1 - chr2R 1518968 intron Maf1 - chr2R 1521348 5` UTR Maf1 - chr2R_4_1515001 chr2R_1515001 RAL-426 677 chr2R 1732845 1732874 chr2R 1733012 1733039 5 166 6.5 6.5 6.5 0.7 194 chr2R 1732845 intron CG41520 + chr2R 1732942 intron CG41520 + chr2R 1733039 intron CG41520 + chr2R_5_1730001 chr2R_1730001 RAL-426 678 chr2R 2015129 2015164 chr2R 2015226 2015261 7 96 4.5 2.5 3.5 1.6 132 chr2R 2015129 intron CG17684 - chr2R 2015195 intron CG17684 - chr2R 2015261 intron CG17684 - chr2R_7_2015001 chr2R_2015001 RAL-426 679 chr2R 2498966 2499016 chr2R 2508131 2508168 roo 16 9164 2.0 4.0 3.0 4.0 9202 chr2R 2498966 intron MFS17 - chr2R 2503567 intron MFS17 - chr2R 2508168 intron MFS17 - chr2R_16_2500001 chr2R_2500001 RAL-426 680 chr2R 1373049 1373067 chr2R 2589327 2589345 Cr1a 5 1216279 14.0 9.0 11.5 0.4 1216296 chr2R 1373049 intron l(2)41Ab + chr2R 1981197 intron CG17684 - chr2R 2589345 intergenic not near genes chr2R_5_1980001 chr2R_1980001 RAL-426 681 chr2R 3091383 3091415 chr2R 3092147 3092179 4 764 4.0 2.5 3.2 1.0 796 chr2R 3091383 intron CG42596 + chr2R 3091781 intron CG42596 + chr2R 3092179 intron CG42596 + chr2R_4_3090001 chr2R_3090001 RAL-426 682 chr2R 3291800 3291961 chr2R 3914992 3915116 5 623183 11.5 15.5 13.5 0.3 623316 chr2R 3291800 intergenic not near genes chr2R 3603458 intergenic not near genes chr2R 3915116 intron uex - chr2R_5_3600001 chr2R_3600001 RAL-426 683 chr2R 4312939 4312970 chr2R 4313041 4313074 5 101 8.5 10.5 9.5 0.5 135 chr2R 4312939 intergenic not near genes chr2R 4313006 intergenic not near genes chr2R 4313074 intergenic not near genes chr2R_5_4310001 chr2R_4310001 RAL-426 684 chr2R 4350749 4350784 chr2R 4350848 4350882 7 99 8.0 7.0 7.5 0.8 133 chr2R 4350749 exon Gprk1 - chr2R 4350816 intron Gprk1 - chr2R 4350882 intron Gprk1 - chr2R_7_4350001 chr2R_4350001 RAL-426 685 chr2R 4604553 4604564 chr2R 4604629 4604663 7 90 10.0 7.5 8.8 0.7 110 chr2R 4604553 intron p120ctn + chr2R 4604608 intron p120ctn + chr2R 4604663 intron p120ctn + chr2R_7_4600001 chr2R_4600001 RAL-426 686 chr2R 4617904 4617949 chr2R 4618192 4618237 5 290 4.5 7.0 5.8 0.7 333 chr2R 4617904 intergenic not near genes chr2R 4618070 intergenic not near genes chr2R 4618237 intergenic not near genes chr2R_5_4615001 chr2R_4615001 RAL-426 687 chr2R 4624628 4624670 chr2R 4626553 4626590 Bica 10 1922 1.5 17.5 9.5 1.0 1962 chr2R 4624628 intergenic not near genes chr2R 4625609 intergenic not near genes chr2R 4626590 intergenic not near genes chr2R_10_4625001 chr2R_4625001 RAL-426 688 chr2R 4634165 4634183 chr2R 4634264 4634282 6 99 12.5 14.0 13.2 0.4 117 chr2R 4634165 intergenic not near genes chr2R 4634224 intergenic not near genes chr2R 4634282 intergenic not near genes chr2R_6_4630001 chr2R_4630001 RAL-426 689 chr2R 4688097 4688127 chr2R 4688208 4688240 11 111 3.0 2.0 2.5 3.1 143 chr2R 4688097 intergenic not near genes chr2R 4688168 intergenic not near genes chr2R 4688240 intergenic not near genes chr2R_11_4685001 chr2R_4685001 RAL-426 690 chr2R 4783403 4783446 chr2R 4783501 4783542 8 94 12.0 12.0 12.0 0.6 139 chr2R 4783403 intergenic not near genes chr2R 4783472 intergenic not near genes chr2R 4783542 intergenic not near genes chr2R_8_4780001 chr2R_4780001 RAL-426 691 chr2R 4838858 4838902 chr2R 4840395 4840412 transib2 9 1536 9.5 4.0 6.8 1.2 1554 chr2R 4838858 intergenic not near genes chr2R 4839635 intergenic not near genes chr2R 4840412 intergenic not near genes chr2R_9_4835001 chr2R_4835001 RAL-426 692 chr2R 4870727 4870743 chr2R 4871258 4871274 R1A1-element 6 530 2.5 3.5 3.0 1.5 547 chr2R 4870727 intergenic not near genes chr2R 4871000 intergenic not near genes chr2R 4871274 intergenic not near genes chr2R_6_4870001 chr2R_4870001 RAL-426 693 chr2R 4887598 4887635 chr2R 4887814 4887850 4 215 7.5 9.0 8.2 0.4 252 chr2R 4887598 intergenic not near genes chr2R 4887724 intergenic not near genes chr2R 4887850 intergenic not near genes chr2R_4_4885001 chr2R_4885001 RAL-426 694 chr2R 4888583 4888602 chr2R 4888690 4888709 5 107 5.0 7.0 6.0 0.7 126 chr2R 4888583 intergenic not near genes chr2R 4888646 intergenic not near genes chr2R 4888709 intergenic not near genes chr2R_5_4885001 chr2R_4885001 RAL-426 695 chr2R 4916093 4916115 chr2R 4916182 4916213 4 95 5.5 4.5 5.0 0.7 120 chr2R 4916093 intergenic not near genes chr2R 4916153 intergenic not near genes chr2R 4916213 intergenic not near genes chr2R_4_4915001 chr2R_4915001 RAL-426 696 chr2R 4933366 4933388 chr2R 4933944 4933964 6 578 6.0 13.0 9.5 0.6 598 chr2R 4933366 intron Ir41a + chr2R 4933665 intron Ir41a + chr2R 4933964 intron Ir41a + chr2R_6_4930001 chr2R_4930001 RAL-426 697 chr2R 4956994 4957046 chr2R 4957117 4957169 10 121 4.0 2.0 3.0 2.5 175 chr2R 4956994 intron Ir41a + chr2R 4957082 intron Ir41a + chr2R 4957169 intron Ir41a + chr2R_10_4955001 chr2R_4955001 RAL-426 698 chr2R 5237328 5237365 chr2R 5237430 5237457 12 99 3.5 0.5 2.0 4.0 129 chr2R 5237328 intron Nipped-A - chr2R 5237392 intron Nipped-A - chr2R 5237457 intron Nipped-A - chr2R_12_5235001 chr2R_5235001 RAL-426 699 chr2R 5417975 5418024 chr2R 5420627 5420676 Burdock 8 2647 3.0 3.0 3.0 2.0 2701 chr2R 5417975 intron laccase2 + chr2R 5419326 intron laccase2 + chr2R 5420676 intron laccase2 + chr2R_8_5415001 chr2R_5415001 RAL-426 700 chr2R 5437662 5437679 chr2R 5437760 5437777 4 94 6.5 9.5 8.0 0.4 115 chr2R 5437662 intron laccase2 + chr2R 5437720 intron laccase2 + chr2R 5437777 intron laccase2 + chr2R_4_5435001 chr2R_5435001 RAL-426 701 chr2R 5460529 5460557 chr2R 5460629 5460635 4 94 10.0 9.0 9.5 0.4 106 chr2R 5460529 intergenic not near genes chr2R 5460582 intergenic not near genes chr2R 5460635 intergenic not near genes chr2R_4_5460001 chr2R_5460001 RAL-426 702 chr2R 5472349 5472375 chr2R 5472461 5472473 7 109 7.5 4.0 5.8 1.0 124 chr2R 5472349 intron CG30440 - chr2R 5472411 intron CG30440 - chr2R 5472473 intron CG30440 - chr2R_7_5470001 chr2R_5470001 RAL-426 703 chr2R 5472376 5472388 chr2R 5472460 5472484 6 105 6.0 3.5 4.8 1.0 108 chr2R 5472376 intron CG30440 - chr2R 5472430 intron CG30440 - chr2R 5472484 intron CG30440 - chr2R_6_5470001 chr2R_5470001 RAL-426 704 chr2R 5473353 5473374 chr2R 5473468 5473489 4 113 12.5 13.5 13.0 0.3 136 chr2R 5473353 intron CG30440 - chr2R 5473421 intron CG30440 - chr2R 5473489 intron CG30440 - chr2R_4_5470001 chr2R_5470001 RAL-426 705 chr2R 5473375 5473393 chr2R 5473463 5473493 6 104 13.0 12.5 12.8 0.4 118 chr2R 5473375 intron CG30440 - chr2R 5473434 intron CG30440 - chr2R 5473493 intron CG30440 - chr2R_6_5470001 chr2R_5470001 RAL-426 706 chr2R 5475433 5475465 chr2R 5475717 5475749 4 284 3.0 4.5 3.8 0.8 316 chr2R 5475433 intron CG30440 - chr2R 5475591 intron CG30440 - chr2R 5475749 intron CG30440 - chr2R_4_5475001 chr2R_5475001 RAL-426 707 chr2R 5543198 5543219 chr2R 5547302 5547321 invader1 5 4103 0.0 9.0 4.5 0.9 4123 chr2R 5543198 intron CG30438 + chr2R 5545260 intron CG30438 + chr2R 5547321 intron CG30438 + chr2R_5_5545001 chr2R_5545001 RAL-426 708 chr2R 5581404 5581419 chr2R 5627599 5627647 4 46220 5.0 8.5 6.8 0.5 46243 chr2R 5581404 intergenic not near genes chr2R 5604526 intron Fis1 - chr2R 5627647 intergenic not near genes chr2R_4_5600001 chr2R_5600001 RAL-426 709 chr2R 5694218 5694244 chr2R 5694312 5694351 4 104 10.0 9.5 9.8 0.4 133 chr2R 5694218 intergenic not near genes chr2R 5694284 intergenic not near genes chr2R 5694351 intergenic not near genes chr2R_4_5690001 chr2R_5690001 RAL-426 710 chr2R 5772827 5772845 chr2R 5772929 5772947 4 102 9.5 6.5 8.0 0.4 120 chr2R 5772827 3` UTR Gp210 + chr2R 5772887 3` UTR Gp210 + chr2R 5772947 3` UTR Gp210 + chr2R_4_5770001 chr2R_5770001 RAL-426 711 chr2R 5779228 5779278 chr2R 5779471 5779521 7 238 4.0 5.5 4.8 1.2 293 chr2R 5779228 intron ZnT41F - chr2R 5779374 intron ZnT41F - chr2R 5779521 intron ZnT41F - chr2R_7_5775001 chr2R_5775001 RAL-426 712 chr2R 5790448 5790496 chr2R 5790548 5790601 4 104 5.0 6.0 5.5 0.6 153 chr2R 5790448 intergenic not near genes chr2R 5790524 intergenic not near genes chr2R 5790601 intergenic not near genes chr2R_4_5790001 chr2R_5790001 RAL-426 713 chr2R 5800248 5800270 chr2R 5800353 5800381 5 109 17.5 16.5 17.0 0.3 133 chr2R 5800248 intergenic not near genes chr2R 5800314 intergenic not near genes chr2R 5800381 intergenic not near genes chr2R_5_5800001 chr2R_5800001 RAL-426 714 chr2R 5814027 5814071 chr2R 5814119 5814168 10 88 13.5 14.5 14.0 0.7 141 chr2R 5814027 intron dpr12 + chr2R 5814098 intron dpr12 + chr2R 5814168 intron dpr12 + chr2R_10_5810001 chr2R_5810001 RAL-426 715 chr2R 5857702 5857745 chr2R 5857809 5857853 7 106 4.0 2.5 3.2 1.7 151 chr2R 5857702 intron dpr12 + chr2R 5857778 intron dpr12 + chr2R 5857853 intron dpr12 + chr2R_7_5855001 chr2R_5855001 RAL-426 716 chr2R 5869258 5869296 chr2R 5874354 5874384 flea 14 5094 8.0 6.5 7.2 1.7 5126 chr2R 5869258 intergenic not near genes chr2R 5871821 intergenic not near genes chr2R 5874384 intergenic not near genes chr2R_14_5870001 chr2R_5870001 RAL-426 717 chr2R 5878906 5878913 chr2R 5879006 5879012 4 100 7.5 10.5 9.0 0.4 106 chr2R 5878906 intergenic CG44438 - chr2R 5878959 intergenic CG44438 - chr2R 5879012 intergenic CG44438 - chr2R_4_5875001 chr2R_5875001 RAL-426 718 chr2R 5885351 5885370 chr2R 5885500 5885519 4 149 9.0 5.5 7.2 0.5 168 chr2R 5885351 5` UTR CR44125 + chr2R 5885435 5` UTR CR44125 + chr2R 5885519 5` UTR CR44125 + chr2R_4_5885001 chr2R_5885001 RAL-426 719 chr2R 5902147 5902165 chr2R 5909716 5909743 17.6 7 7574 3.0 2.0 2.5 2.0 7596 chr2R 5902147 intron CG43366 + chr2R 5905945 intron CG43366 + chr2R 5909743 intron CG43366 + chr2R_7_5905001 chr2R_5905001 RAL-426 720 chr2R 5985816 5985865 chr2R 5985919 5985936 5 92 8.5 6.5 7.5 0.6 120 chr2R 5985816 intron Src42A + chr2R 5985876 intron Src42A + chr2R 5985936 intron Src42A + chr2R_5_5985001 chr2R_5985001 RAL-426 721 chr2R 6037438 6037477 chr2R 6037542 6037582 10 104 13.5 14.0 13.8 0.7 144 chr2R 6037438 intron CG14591 - chr2R 6037510 intron CG14591 - chr2R 6037582 intron CG14591 - chr2R_10_6035001 chr2R_6035001 RAL-426 722 chr2R 6076399 6076438 chr2R 6076542 6076583 7 142 7.5 6.0 6.8 0.9 184 chr2R 6076399 intergenic CG7845 - chr2R 6076491 intergenic CG7845 -,CG7849 + chr2R 6076583 intergenic CG7845 -,CG7849 + chr2R_7_6075001 chr2R_6075001 RAL-426 723 chr2R 6088351 6088381 chr2R 6088464 6088494 7 109 3.5 3.5 3.5 1.6 143 chr2R 6088351 intergenic not near genes chr2R 6088422 intergenic not near genes chr2R 6088494 intergenic not near genes chr2R_7_6085001 chr2R_6085001 RAL-426 724 chr2R 6096723 6096746 chr2R 6101909 6101942 BS 5 5190 7.5 3.0 5.2 0.8 5219 chr2R 6096723 intron EcR - chr2R 6099332 intron EcR - chr2R 6101942 intron EcR - chr2R_5_6095001 chr2R_6095001 RAL-426 725 chr2R 6124177 6124205 chr2R 6124295 6124323 6 118 8.5 4.5 6.5 0.8 146 chr2R 6124177 intron EcR - chr2R 6124250 intron EcR - chr2R 6124323 intron EcR - chr2R_6_6120001 chr2R_6120001 RAL-426 726 chr2R 6129309 6129337 chr2R 6129407 6129431 5 97 13.0 12.0 12.5 0.4 122 chr2R 6129309 intron EcR - chr2R 6129370 intron EcR - chr2R 6129431 intron EcR - chr2R_5_6125001 chr2R_6125001 RAL-426 727 chr2R 6168186 6168227 chr2R 6168288 6168315 7 99 5.0 3.0 4.0 1.4 129 chr2R 6168186 intron EcR - chr2R 6168250 intron EcR - chr2R 6168315 intron EcR - chr2R_7_6165001 chr2R_6165001 RAL-426 728 chr2R 6178104 6178142 chr2R 6178250 6178288 13 146 2.0 6.0 4.0 2.6 184 chr2R 6178104 intergenic not near genes chr2R 6178196 intergenic not near genes chr2R 6178288 intergenic not near genes chr2R_13_6175001 chr2R_6175001 RAL-426 729 chr2R 6178674 6178713 chr2R 6178767 6178820 5 104 7.5 8.0 7.8 0.6 146 chr2R 6178674 intergenic not near genes chr2R 6178747 intergenic not near genes chr2R 6178820 intergenic not near genes chr2R_5_6175001 chr2R_6175001 RAL-426 730 chr2R 6194666 6194693 chr2R 6194769 6194796 6 103 12.0 5.0 8.5 0.6 130 chr2R 6194666 intron Ptr - chr2R 6194731 intron Ptr - chr2R 6194796 intron Ptr - chr2R_6_6190001 chr2R_6190001 RAL-426 731 chr2R 6494507 6494546 chr2R 6499289 6499312 F-element 7 4777 2.5 0.5 1.5 2.8 4805 chr2R 6494507 intergenic not near genes chr2R 6496910 intergenic not near genes chr2R 6499312 intergenic not near genes chr2R_7_6495001 chr2R_6495001 RAL-426 732 chr2R 6530752 6530789 chr2R 6530851 6530885 4 99 11.5 9.5 10.5 0.3 133 chr2R 6530752 intron jing + chr2R 6530818 intron jing + chr2R 6530885 intron jing + chr2R_4_6530001 chr2R_6530001 RAL-426 733 chr2R 6579760 6579804 chr2R 6584857 6584893 flea 9 5103 4.0 1.0 2.5 2.6 5133 chr2R 6579760 intron jing + chr2R 6582326 intron jing + chr2R 6584893 intron jing + chr2R_9_6580001 chr2R_6580001 RAL-426 734 chr2R 6597851 6597889 chr2R 6597959 6597996 5 106 10.5 11.5 11.0 0.4 145 chr2R 6597851 intron jing + chr2R 6597924 intron jing + chr2R 6597996 intron jing + chr2R_5_6595001 chr2R_6595001 RAL-426 735 chr2R 6607921 6607950 chr2R 6608032 6608071 8 116 17.0 22.5 19.8 0.4 150 chr2R 6607921 intron jing + chr2R 6607996 intron jing + chr2R 6608071 intron jing + chr2R_8_6605001 chr2R_6605001 RAL-426 736 chr2R 6633196 6633228 chr2R 6633292 6633293 7 92 5.0 5.5 5.2 1.1 97 chr2R 6633196 intergenic Vha16-1 -,Trap1 - chr2R 6633244 intergenic Vha16-1 -,Trap1 - chr2R 6633293 intergenic Vha16-1 -,Trap1 - chr2R_7_6630001 chr2R_6630001 RAL-426 737 chr2R 6699594 6699623 chr2R 6699686 6699722 4 100 7.5 5.5 6.5 0.5 128 chr2R 6699594 intergenic Rab2 + chr2R 6699658 intergenic Rab2 + chr2R 6699722 intergenic Rab2 +,CG3409 -,CG45092 - chr2R_4_6695001 chr2R_6695001 RAL-426 738 chr2R 6797076 6797099 chr2R 6797186 6797210 4 112 9.0 3.5 6.2 0.6 134 chr2R 6797076 5` UTR Epac - chr2R 6797143 5` UTR Epac - chr2R 6797210 5` UTR Epac - chr2R_4_6795001 chr2R_6795001 RAL-426 739 chr2R 6822382 6822425 chr2R 6822478 6822511 7 94 6.5 5.5 6.0 1.0 129 chr2R 6822382 3` UTR CR44442 - chr2R 6822446 3` UTR CR44442 - chr2R 6822511 3` UTR CR44442 - chr2R_7_6820001 chr2R_6820001 RAL-426 740 chr2R 6831386 6831440 chr2R 6831774 6831799 11 379 11.0 9.5 10.2 1.0 413 chr2R 6831386 intron,3` UTR CG15236 +,CG34215 - chr2R 6831592 intron,exon CG15236 +,CG34215 - chr2R 6831799 intron CG15236 + chr2R_11_6830001 chr2R_6830001 RAL-426 741 chr2R 6865669 6865718 chr2R 6865784 6865833 8 114 9.0 11.0 10.0 0.7 164 chr2R 6865669 intron coro - chr2R 6865751 intron coro - chr2R 6865833 intron coro - chr2R_8_6865001 chr2R_6865001 RAL-426 742 chr2R 6876202 6876247 chr2R 6876304 6876347 8 95 10.5 13.0 11.8 0.6 145 chr2R 6876202 intron,intron CR44169 +,Spn42Da - chr2R 6876274 5` UTR,intron CR44169 +,Spn42Da - chr2R 6876347 5` UTR,intron CR44169 +,Spn42Da - chr2R_8_6875001 chr2R_6875001 RAL-426 743 chr2R 6881479 6881517 chr2R 6881590 6881629 5 112 4.5 5.0 4.8 0.9 150 chr2R 6881479 intron Spn42Dc + chr2R 6881554 intron Spn42Dc + chr2R 6881629 intron Spn42Dc + chr2R_5_6880001 chr2R_6880001 RAL-426 744 chr2R 6952150 6952184 chr2R 6959750 6959784 opus 4 7600 4.5 3.0 3.8 0.8 7634 chr2R 6952150 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R 6955967 intron,intron mim -,CheB42c - chr2R 6959784 intron,intron mim -,CheB42c - chr2R_4_6955001 chr2R_6955001 RAL-426 745 chr2R 6978785 6978837 chr2R 6978947 6978966 9 156 8.0 11.0 9.5 0.9 181 chr2R 6978785 intron vimar - chr2R 6978876 intron vimar - chr2R 6978966 intron vimar - chr2R_9_6975001 chr2R_6975001 RAL-426 746 chr2R 7115537 7115550 chr2R 7115788 7115804 5 262 3.0 9.5 6.2 0.7 267 chr2R 7115537 intron esn + chr2R 7115670 intron esn + chr2R 7115804 intron esn + chr2R_5_7115001 chr2R_7115001 RAL-426 747 chr2R 7153152 7153191 chr2R 7153245 7153297 5 92 11.0 8.5 9.8 0.5 145 chr2R 7153152 intron,intron pk +,Spn43Ab - chr2R 7153224 intron,intron pk +,Spn43Ab - chr2R 7153297 intron,intron pk +,Spn43Ab - chr2R_5_7150001 chr2R_7150001 RAL-426 748 chr2R 7164258 7164281 chr2R 7164469 7164491 6 209 11.0 12.5 11.8 0.5 233 chr2R 7164258 intron pk + chr2R 7164374 intron pk + chr2R 7164491 intron pk + chr2R_6_7160001 chr2R_7160001 RAL-426 749 chr2R 7196556 7196590 chr2R 7201341 7201385 F-element 4 4792 6.5 3.0 4.8 0.7 4829 chr2R 7196556 intron pk + chr2R 7198970 intron pk + chr2R 7201385 intron pk + chr2R_4_7195001 chr2R_7195001 RAL-426 750 chr2R 7235833 7235849 chr2R 7240907 7240926 jockey 5 5082 4.0 4.0 4.0 1.0 5093 chr2R 7235833 intergenic not near genes chr2R 7238380 intergenic not near genes chr2R 7240926 intergenic not near genes chr2R_5_7235001 chr2R_7235001 RAL-426 751 chr2R 7328135 7328153 chr2R 7328250 7328282 6 123 9.5 10.0 9.8 0.6 147 chr2R 7328135 intron,intron Dscam1 -,CR45129 + chr2R 7328208 intron,intron Dscam1 -,CR45129 + chr2R 7328282 intron,intron Dscam1 -,CR45129 + chr2R_6_7325001 chr2R_7325001 RAL-426 752 chr2R 7353369 7353416 chr2R 7353495 7353540 10 119 12.0 11.5 11.8 0.8 171 chr2R 7353369 intron Dscam1 - chr2R 7353454 intron Dscam1 - chr2R 7353540 intron Dscam1 - chr2R_10_7350001 chr2R_7350001 RAL-426 753 chr2R 7417888 7418169 chr2R 7417990 7418268 24 98 3.5 5.0 4.2 4.6 380 chr2R 7417888 intergenic not near genes chr2R 7418078 intergenic not near genes chr2R 7418268 intergenic not near genes chr2R_24_7415001 chr2R_7415001 RAL-426 754 chr2R 7459264 7459283 chr2R 7459372 7459390 4 108 4.5 4.0 4.2 0.8 126 chr2R 7459264 intergenic Inos -,CG11141 - chr2R 7459327 intergenic CG11141 -,Inos - chr2R 7459390 intergenic CG11141 - chr2R_4_7455001 chr2R_7455001 RAL-426 755 chr2R 7475415 7475452 chr2R 7475535 7475554 4 116 8.5 11.0 9.8 0.4 139 chr2R 7475415 intron Aldh-III - chr2R 7475484 exon Aldh-III - chr2R 7475554 5` UTR Aldh-III - chr2R_4_7475001 chr2R_7475001 RAL-426 756 chr2R 7478586 7478610 chr2R 7478667 7478687 6 85 11.0 12.5 11.8 0.5 101 chr2R 7478586 intergenic wech - chr2R 7478636 intergenic wech - chr2R 7478687 intergenic wech - chr2R_6_7475001 chr2R_7475001 RAL-426 757 chr2R 7608388 7608439 chr2R 7613610 7613626 I-element 17 5218 3.5 4.0 3.8 3.5 5238 chr2R 7608388 intron CG1358 - chr2R 7611007 intron CG1358 - chr2R 7613626 intron CG1358 - chr2R_17_7610001 chr2R_7610001 RAL-426 758 chr2R 7631174 7631201 chr2R 7631292 7631319 6 118 11.0 11.0 11.0 0.5 145 chr2R 7631174 intron CG43340 + chr2R 7631246 intron CG43340 + chr2R 7631319 intron CG43340 + chr2R_6_7630001 chr2R_7630001 RAL-426 759 chr2R 7691994 7692023 chr2R 7692095 7692107 5 97 12.5 14.5 13.5 0.3 113 chr2R 7691994 intron CG1399 - chr2R 7692050 intron CG1399 - chr2R 7692107 intron CG1399 - chr2R_5_7690001 chr2R_7690001 RAL-426 760 chr2R 7714064 7714109 chr2R 7714160 7714204 4 91 13.0 12.0 12.5 0.3 140 chr2R 7714064 exon CG1942 + chr2R 7714134 3` UTR CG1942 + chr2R 7714204 intergenic CG1942 + chr2R_4_7710001 chr2R_7710001 RAL-426 761 chr2R 7737892 7737905 chr2R 7737991 7738004 4 99 10.5 9.0 9.8 0.4 112 chr2R 7737892 intergenic not near genes chr2R 7737948 intergenic not near genes chr2R 7738004 intergenic not near genes chr2R_4_7735001 chr2R_7735001 RAL-426 762 chr2R 7775278 7775316 chr2R 7775388 7775390 6 100 12.0 11.0 11.5 0.5 112 chr2R 7775278 intron,intron CG30497 -,CG45093 - chr2R 7775334 intron,intron CG30497 -,CG45093 - chr2R 7775390 intron,intron CG30497 -,CG45093 - chr2R_6_7775001 chr2R_7775001 RAL-426 763 chr2R 7815652 7815697 chr2R 7822141 7822186 Burdock 9 6486 4.5 4.0 4.2 1.7 6534 chr2R 7815652 intergenic CG1882 + chr2R 7818919 intergenic not near genes chr2R 7822186 3` UTR cathD - chr2R_9_7815001 chr2R_7815001 RAL-426 764 chr2R 7862240 7862249 chr2R 7867371 7867378 flea 4 5130 5.0 6.5 5.8 0.6 5138 chr2R 7862240 intron Dgk - chr2R 7864809 intron Dgk - chr2R 7867378 intron Dgk - chr2R_4_7860001 chr2R_7860001 RAL-426 765 chr2R 7869194 7869210 chr2R 7873984 7874005 Doc 6 4796 6.5 4.0 5.2 1.0 4811 chr2R 7869194 intron Dgk - chr2R 7871600 intron Dgk - chr2R 7874005 intron Dgk - chr2R_6_7870001 chr2R_7870001 RAL-426 766 chr2R 7892140 7892180 chr2R 7892382 7892388 4 232 7.5 13.0 10.2 0.4 248 chr2R 7892140 intron CG30377 + chr2R 7892264 intron CG30377 + chr2R 7892388 intron CG30377 + chr2R_4_7890001 chr2R_7890001 RAL-426 767 chr2R 7916403 7916456 chr2R 7916508 7916561 5 98 16.0 14.5 15.2 0.3 158 chr2R 7916403 5` UTR CG12159 - chr2R 7916482 intergenic CG12159 -,Cul1 + chr2R 7916561 intergenic CG12159 -,Cul1 + chr2R_5_7915001 chr2R_7915001 RAL-426 768 chr2R 7926926 7926932 chr2R 7927022 7927027 4 96 4.5 5.5 5.0 0.7 101 chr2R 7926926 intron CG8791 + chr2R 7926976 intron CG8791 + chr2R 7927027 intron CG8791 + chr2R_4_7925001 chr2R_7925001 RAL-426 769 chr2R 7956075 7956106 chr2R 7956171 7956200 6 95 8.0 9.0 8.5 0.6 125 chr2R 7956075 intergenic CG2906 +,CG14764 - chr2R 7956138 intergenic CG2906 +,CG14764 - chr2R 7956200 5` UTR CG2906 + chr2R_6_7955001 chr2R_7955001 RAL-426 770 chr2R 7982049 7982083 chr2R 7982179 7982213 9 130 9.0 11.5 10.2 0.8 164 chr2R 7982049 intron ACC - chr2R 7982131 intron ACC - chr2R 7982213 intron ACC - chr2R_9_7980001 chr2R_7980001 RAL-426 771 chr2R 8015648 8015679 chr2R 8017670 8017720 7 2034 3.5 3.0 3.2 1.7 2072 chr2R 8015648 intergenic mir-4981 + chr2R 8016684 intergenic not near genes chr2R 8017720 intergenic not near genes chr2R_7_8015001 chr2R_8015001 RAL-426 772 chr2R 8067053 8067094 chr2R 8067156 8067196 19 101 4.5 5.5 5.0 3.2 143 chr2R 8067053 intron CG17977 - chr2R 8067124 intron CG17977 - chr2R 8067196 exon CG17977 - chr2R_19_8065001 chr2R_8065001 RAL-426 773 chr2R 8076662 8076709 chr2R 8076761 8076809 19 99 7.5 4.5 6.0 2.7 147 chr2R 8076662 intron lig + chr2R 8076736 intron lig + chr2R 8076809 intron lig + chr2R_19_8075001 chr2R_8075001 RAL-426 774 chr2R 8089238 8089245 chr2R 8089344 8089351 6 106 5.5 4.5 5.0 1.0 113 chr2R 8089238 3` UTR sut2 + chr2R 8089294 3` UTR sut2 + chr2R 8089351 intergenic sut2 +,sut3 + chr2R_6_8085001 chr2R_8085001 RAL-426 775 chr2R 8089248 8089277 chr2R 8089340 8089383 10 103 2.5 3.0 2.8 2.6 135 chr2R 8089248 3` UTR sut2 + chr2R 8089316 intergenic sut2 +,sut3 + chr2R 8089383 intergenic sut2 +,sut3 + chr2R_10_8085001 chr2R_8085001 RAL-426 776 chr2R 8114037 8114056 chr2R 8114146 8114157 4 106 4.5 8.5 6.5 0.5 120 chr2R 8114037 intergenic Asap - chr2R 8114097 intergenic Asap - chr2R 8114157 intergenic Asap - chr2R_4_8110001 chr2R_8110001 RAL-426 777 chr2R 8160918 8160937 chr2R 8161027 8161042 1360 5 108 15.0 22.0 18.5 0.3 124 chr2R 8160918 exon CG8708 - chr2R 8160980 intron CG8708 - chr2R 8161042 intron CG8708 - chr2R_5_8160001 chr2R_8160001 RAL-426 778 chr2R 8236023 8236058 chr2R 8236124 8236158 8 100 5.0 3.0 4.0 1.6 135 chr2R 8236023 intergenic not near genes chr2R 8236090 intergenic not near genes chr2R 8236158 intergenic not near genes chr2R_8_8235001 chr2R_8235001 RAL-426 779 chr2R 8297426 8297443 chr2R 8297522 8297538 5 97 7.5 8.5 8.0 0.6 112 chr2R 8297426 intergenic not near genes chr2R 8297482 intergenic not near genes chr2R 8297538 intergenic not near genes chr2R_5_8295001 chr2R_8295001 RAL-426 780 chr2R 8330854 8330887 chr2R 8331360 8331393 roo 16 503 6.5 5.0 5.8 2.4 539 chr2R 8330854 intron pdm3 + chr2R 8331124 intron pdm3 + chr2R 8331393 intron pdm3 + chr2R_16_8330001 chr2R_8330001 RAL-426 781 chr2R 8348726 8348748 chr2R 8348826 8348844 9 104 10.0 2.0 6.0 1.3 118 chr2R 8348726 intron pdm3 + chr2R 8348785 intron pdm3 + chr2R 8348844 intron pdm3 + chr2R_9_8345001 chr2R_8345001 RAL-426 782 chr2R 8398211 8398227 chr2R 8403012 8403028 Doc 4 4800 7.0 5.0 6.0 0.6 4817 chr2R 8398211 intron CG2121 - chr2R 8400620 intron CG2121 - chr2R 8403028 intron CG2121 - chr2R_4_8400001 chr2R_8400001 RAL-426 783 chr2R 8419352 8419394 chr2R 8419443 8419498 9 101 12.0 14.5 13.2 0.6 146 chr2R 8419352 intergenic not near genes chr2R 8419425 intergenic not near genes chr2R 8419498 intergenic not near genes chr2R_9_8415001 chr2R_8415001 RAL-426 784 chr2R 8483953 8483988 chr2R 8484048 8484083 6 95 10.5 13.5 12.0 0.5 130 chr2R 8483953 intron mtt - chr2R 8484018 intron mtt - chr2R 8484083 intron mtt - chr2R_6_8480001 chr2R_8480001 RAL-426 785 chr2R 8518771 8518966 chr2R 12066250 12066366 15 3547476 12.0 2.5 7.2 1.8 3547595 chr2R 8518771 intron mtt - chr2R 10292568 intron CAP + chr2R 12066366 intron CG8888 - chr2R_15_10290001 chr2R_10290001 RAL-426 786 chr2R 8566040 8566065 chr2R 8567006 8567031 1360 9 964 12.0 14.5 13.2 0.6 991 chr2R 8566040 5` UTR Cyp6a14 - chr2R 8566536 5` UTR Cyp6a14 - chr2R 8567031 5` UTR Cyp6a14 - chr2R_9_8565001 chr2R_8565001 RAL-426 787 chr2R 8635909 8635933 chr2R 8636007 8636031 7 95 0.0 4.0 2.0 2.3 122 chr2R 8635909 intergenic not near genes chr2R 8635970 intergenic not near genes chr2R 8636031 intergenic not near genes chr2R_7_8635001 chr2R_8635001 RAL-426 788 chr2R 8689369 8689382 chr2R 8689478 8689491 4 108 12.0 9.5 10.8 0.3 122 chr2R 8689369 intergenic not near genes chr2R 8689430 intergenic not near genes chr2R 8689491 intergenic not near genes chr2R_4_8685001 chr2R_8685001 RAL-426 789 chr2R 8698901 8698936 chr2R 8699138 8699173 5 237 13.0 11.5 12.2 0.4 272 chr2R 8698901 intergenic CG8738 + chr2R 8699037 intergenic CG8738 + chr2R 8699173 intergenic not near genes chr2R_5_8695001 chr2R_8695001 RAL-426 790 chr2R 8722743 8722789 chr2R 8723004 8723039 pogo 10 252 5.0 2.0 3.5 2.2 296 chr2R 8722743 intron CG14767 - chr2R 8722891 intron CG14767 - chr2R 8723039 intron CG14767 - chr2R_10_8720001 chr2R_8720001 RAL-426 791 chr2R 8759773 8759791 chr2R 8759868 8759884 4 96 8.0 6.0 7.0 0.5 111 chr2R 8759773 intergenic CG8740 + chr2R 8759828 intergenic CG8740 + chr2R 8759884 intergenic CG8740 + chr2R_4_8755001 chr2R_8755001 RAL-426 792 chr2R 8777913 8777941 chr2R 8784123 8784152 diver 6 6215 3.0 7.0 5.0 1.0 6239 chr2R 8777913 intergenic not near genes chr2R 8781032 intergenic not near genes chr2R 8784152 intergenic not near genes chr2R_6_8780001 chr2R_8780001 RAL-426 793 chr2R 8808285 8808310 chr2R 8808384 8808409 6 98 12.5 16.5 14.5 0.4 124 chr2R 8808285 intron sns + chr2R 8808347 intron sns + chr2R 8808409 intron sns + chr2R_6_8805001 chr2R_8805001 RAL-426 794 chr2R 8833408 8833444 chr2R 8833508 8833528 5 97 17.0 15.5 16.2 0.3 120 chr2R 8833408 intron sns + chr2R 8833468 intron sns + chr2R 8833528 intron sns + chr2R_5_8830001 chr2R_8830001 RAL-426 795 chr2R 8891351 8891392 chr2R 8891443 8891490 8 92 9.5 8.5 9.0 0.8 139 chr2R 8891351 5` UTR CG8272 - chr2R 8891420 intergenic CG8272 -,Dmn + chr2R 8891490 intergenic CG8272 -,Dmn + chr2R_8_8890001 chr2R_8890001 RAL-426 796 chr2R 8967410 8967699 chr2R 8967577 8967835 14 164 7.5 4.0 5.8 2.1 425 chr2R 8967410 intron CG8216 - chr2R 8967622 intron CG8216 - chr2R 8967835 intron CG8216 - chr2R_14_8965001 chr2R_8965001 RAL-426 797 chr2R 8976610 8976636 chr2R 8976686 8976732 6 87 7.0 9.5 8.2 0.7 122 chr2R 8976610 intron CG8213 - chr2R 8976671 intron CG8213 - chr2R 8976732 intron CG8213 - chr2R_6_8975001 chr2R_8975001 RAL-426 798 chr2R 9010887 9010939 chr2R 9011116 9011163 5 219 11.5 12.0 11.8 0.4 276 chr2R 9010887 intron CG8172 - chr2R 9011025 intron CG8172 - chr2R 9011163 intron CG8172 - chr2R_5_9010001 chr2R_9010001 RAL-426 799 chr2R 9031971 9032012 chr2R 9032069 9032109 8 95 11.5 15.0 13.2 0.6 138 chr2R 9031971 intergenic not near genes chr2R 9032040 intergenic not near genes chr2R 9032109 intergenic not near genes chr2R_8_9030001 chr2R_9030001 RAL-426 800 chr2R 9110127 9110167 chr2R 9110236 9110273 7 107 7.5 8.0 7.8 0.8 146 chr2R 9110127 intergenic Pmm45A - chr2R 9110200 intergenic Pmm45A - chr2R 9110273 intergenic not near genes chr2R_7_9110001 chr2R_9110001 RAL-426 801 chr2R 9129971 9130013 chr2R 9130074 9130115 6 102 8.5 7.0 7.8 0.7 144 chr2R 9129971 intron CG18659 - chr2R 9130043 intron CG18659 - chr2R 9130115 intron CG18659 - chr2R_6_9130001 chr2R_9130001 RAL-426 802 chr2R 9151281 9151326 chr2R 9157770 9157815 Burdock 11 6487 3.5 3.0 3.2 2.6 6534 chr2R 9151281 exon CG30345 + chr2R 9154548 intergenic not near genes chr2R 9157815 intergenic CG8008 - chr2R_11_9150001 chr2R_9150001 RAL-426 803 chr2R 9161973 9162006 chr2R 9162078 9162111 8 104 12.5 13.5 13.0 0.6 138 chr2R 9161973 5` UTR CR44283 + chr2R 9162042 3` UTR CG8046 - chr2R 9162111 3` UTR CG8046 - chr2R_8_9160001 chr2R_9160001 RAL-426 804 chr2R 9191895 9191940 chr2R 9191996 9192031 4 92 13.0 12.5 12.8 0.3 136 chr2R 9191895 5` UTR,5` UTR CG45085 -,CG8026 - chr2R 9191963 5` UTR,5` UTR CG45085 -,CG8026 - chr2R 9192031 5` UTR,5` UTR CG45085 -,CG8026 - chr2R_4_9190001 chr2R_9190001 RAL-426 805 chr2R 9230221 9230240 chr2R 9230309 9230340 4 95 12.5 12.0 12.2 0.3 119 chr2R 9230221 intron hig - chr2R 9230280 intron hig - chr2R 9230340 exon hig - chr2R_4_9230001 chr2R_9230001 RAL-426 806 chr2R 9267959 9267989 chr2R 9268065 9268094 4 106 15.5 12.5 14.0 0.3 135 chr2R 9267959 exon Pkn - chr2R 9268026 intron Pkn - chr2R 9268094 intron Pkn - chr2R_4_9265001 chr2R_9265001 RAL-426 807 chr2R 9492581 9492612 chr2R 9492725 9492756 5 144 12.0 10.5 11.2 0.4 175 chr2R 9492581 intergenic not near genes chr2R 9492668 intergenic not near genes chr2R 9492756 intergenic not near genes chr2R_5_9490001 chr2R_9490001 RAL-426 808 chr2R 9541629 9541651 chr2R 9541722 9541748 4 94 5.0 10.0 7.5 0.5 119 chr2R 9541629 intergenic brp +,CG1888 - chr2R 9541688 intergenic brp +,CG1888 - chr2R 9541748 intergenic brp +,CG1888 - chr2R_4_9540001 chr2R_9540001 RAL-426 809 chr2R 9561806 9561850 chr2R 9561913 9561957 6 106 0.0 0.0 0.0 6.0 151 chr2R 9561806 3` UTR,intron CR45281 -,CG1809 + chr2R 9561882 3` UTR,intron CR45281 -,CG1809 + chr2R 9561957 3` UTR,intron CR45281 -,CG1809 + chr2R_6_9560001 chr2R_9560001 RAL-426 810 chr2R 9605815 9605857 chr2R 9605941 9605984 6 126 8.0 9.0 8.5 0.6 169 chr2R 9605815 3` UTR CR44285 - chr2R 9605900 intergenic CR44285 -,GstT1 +,CG1902 + chr2R 9605984 intergenic GstT1 +,CR44285 -,CG1902 + chr2R_6_9605001 chr2R_9605001 RAL-426 811 chr2R 9672043 9672080 chr2R 9672170 9672205 6 126 14.5 11.0 12.8 0.4 162 chr2R 9672043 intron Mmp2 - chr2R 9672124 intron Mmp2 - chr2R 9672205 intron Mmp2 - chr2R_6_9670001 chr2R_9670001 RAL-426 812 chr2R 9687235 9687267 chr2R 9687337 9687369 8 100 9.0 7.5 8.2 0.9 134 chr2R 9687235 intergenic not near genes chr2R 9687302 intergenic not near genes chr2R 9687369 intergenic not near genes chr2R_8_9685001 chr2R_9685001 RAL-426 813 chr2R 9807415 9807462 chr2R 9807578 9807626 4 164 10.0 15.0 12.5 0.3 211 chr2R 9807415 intergenic not near genes chr2R 9807520 intergenic not near genes chr2R 9807626 intergenic not near genes chr2R_4_9805001 chr2R_9805001 RAL-426 814 chr2R 9869671 9869701 chr2R 9869802 9869832 4 131 8.5 8.5 8.5 0.4 161 chr2R 9869671 intron cbx - chr2R 9869752 intron cbx - chr2R 9869832 intron cbx - chr2R_4_9865001 chr2R_9865001 RAL-426 815 chr2R 9871029 9871058 chr2R 9871535 9871559 roo 4 503 6.5 5.5 6.0 0.6 530 chr2R 9871029 intron cbx - chr2R 9871294 intron cbx - chr2R 9871559 intron,5` UTR cbx -,CG18446 + chr2R_4_9870001 chr2R_9870001 RAL-426 816 chr2R 9928404 9928445 chr2R 9928549 9928553 14 138 2.5 4.0 3.2 3.3 149 chr2R 9928404 intron Mef2 - chr2R 9928478 intron Mef2 - chr2R 9928553 intron Mef2 - chr2R_14_9925001 chr2R_9925001 RAL-426 817 chr2R 9945433 9945465 chr2R 9945640 9945681 BS 13 211 4.0 7.5 5.8 1.9 248 chr2R 9945433 intron Mef2 - chr2R 9945557 intron Mef2 - chr2R 9945681 intron Mef2 - chr2R_13_9945001 chr2R_9945001 RAL-426 818 chr2R 9963354 9963401 chr2R 9963488 9963539 6 133 14.0 10.5 12.2 0.5 185 chr2R 9963354 exon Pal1 + chr2R 9963446 3` UTR Pal1 + chr2R 9963539 3` UTR Pal1 + chr2R_6_9960001 chr2R_9960001 RAL-426 819 chr2R 10005835 10005873 chr2R 10007014 10007056 1360 10 1171 4.0 4.5 4.2 1.9 1221 chr2R 10005835 intron Pka-R2 - chr2R 10006446 intron Pka-R2 - chr2R 10007056 intron Pka-R2 - chr2R_10_10005001 chr2R_10005001 RAL-426 820 chr2R 10010436 10010472 chr2R 10010572 10010587 4 124 14.0 13.0 13.5 0.3 151 chr2R 10010436 intron Pka-R2 - chr2R 10010512 intron Pka-R2 - chr2R 10010587 intron Pka-R2 - chr2R_4_10010001 chr2R_10010001 RAL-426 821 chr2R 10017638 10017678 chr2R 10017737 10017748 8 94 10.0 8.0 9.0 0.8 110 chr2R 10017638 intron Pka-R2 - chr2R 10017693 intron Pka-R2 - chr2R 10017748 intron Pka-R2 - chr2R_8_10015001 chr2R_10015001 RAL-426 822 chr2R 10050170 10050199 chr2R 10050306 10050336 8 134 15.5 13.0 14.2 0.5 166 chr2R 10050170 intergenic CoVIIc +,CG44296 + chr2R 10050253 intergenic CG44296 +,CoVIIc + chr2R 10050336 intergenic CG44296 +,CoVIIc + chr2R_8_10050001 chr2R_10050001 RAL-426 823 chr2R 10055717 10055756 chr2R 10055813 10055851 11 92 5.5 8.0 6.8 1.4 134 chr2R 10055717 intron magu + chr2R 10055784 intron magu + chr2R 10055851 intron magu + chr2R_11_10055001 chr2R_10055001 RAL-426 824 chr2R 10086907 10086934 chr2R 10087018 10087049 11 109 3.0 3.5 3.2 2.6 142 chr2R 10086907 intron,exon CG2269 +,sut4 - chr2R 10086978 intron,5` UTR CG2269 +,sut4 - chr2R 10087049 intron,5` UTR CG2269 +,sut4 - chr2R_11_10085001 chr2R_10085001 RAL-426 825 chr2R 10095383 10095397 chr2R 10095479 10095491 4 95 8.0 11.0 9.5 0.4 108 chr2R 10095383 3` UTR CG2269 + chr2R 10095437 3` UTR CG2269 + chr2R 10095491 3` UTR CG2269 + chr2R_4_10095001 chr2R_10095001 RAL-426 826 chr2R 10122731 10122741 chr2R 10122950 10122971 5 227 5.5 4.0 4.8 0.9 240 chr2R 10122731 intergenic Ccs - chr2R 10122851 intergenic Ccs - chr2R 10122971 intergenic Ccs - chr2R_5_10120001 chr2R_10120001 RAL-426 827 chr2R 10155839 10155862 chr2R 10155954 10155977 4 114 7.0 6.0 6.5 0.5 138 chr2R 10155839 intron KCNQ - chr2R 10155908 intron KCNQ - chr2R 10155977 intron,3` UTR KCNQ -,mlt - chr2R_4_10155001 chr2R_10155001 RAL-426 828 chr2R 10176862 10176902 chr2R 10186048 10186089 roo 7 9187 5.5 2.5 4.0 1.4 9227 chr2R 10176862 intron KCNQ - chr2R 10181476 intron KCNQ - chr2R 10186089 intron KCNQ - chr2R_7_10180001 chr2R_10180001 RAL-426 829 chr2R 10201020 10201037 chr2R 10201105 10201122 4 87 11.5 9.5 10.5 0.3 102 chr2R 10201020 intergenic not near genes chr2R 10201071 intergenic not near genes chr2R 10201122 intergenic not near genes chr2R_4_10200001 chr2R_10200001 RAL-426 830 chr2R 10203621 10203642 chr2R 10203725 10203747 5 105 6.5 6.5 6.5 0.7 126 chr2R 10203621 intergenic not near genes chr2R 10203684 intergenic not near genes chr2R 10203747 intergenic not near genes chr2R_5_10200001 chr2R_10200001 RAL-426 831 chr2R 10216198 10216216 chr2R 10216295 10216311 5 94 14.5 12.0 13.2 0.4 113 chr2R 10216198 intron,intron CG12912 -,Hr46 - chr2R 10216254 intron,intron CG12912 -,Hr46 - chr2R 10216311 intron,intron CG12912 -,Hr46 - chr2R_5_10215001 chr2R_10215001 RAL-426 832 chr2R 10274814 10274817 chr2R 10274908 10274910 4 95 13.0 6.5 9.8 0.4 96 chr2R 10274814 intron CAP + chr2R 10274862 intron CAP + chr2R 10274910 intron CAP + chr2R_4_10270001 chr2R_10270001 RAL-426 833 chr2R 10300640 10300678 chr2R 10300756 10300794 5 116 6.5 6.5 6.5 0.7 154 chr2R 10300640 intron CAP + chr2R 10300717 intron CAP + chr2R 10300794 intron CAP + chr2R_5_10300001 chr2R_10300001 RAL-426 834 chr2R 10318495 10318530 chr2R 10318601 10318633 14 106 2.0 3.5 2.8 3.7 138 chr2R 10318495 intron Ndg + chr2R 10318564 intron Ndg + chr2R 10318633 intron Ndg + chr2R_14_10315001 chr2R_10315001 RAL-426 835 chr2R 10319713 10319727 chr2R 10319825 10319839 4 112 15.5 10.5 13.0 0.3 126 chr2R 10319713 intron Ndg + chr2R 10319776 intron Ndg + chr2R 10319839 intron Ndg + chr2R_4_10315001 chr2R_10315001 RAL-426 836 chr2R 10322065 10322072 chr2R 10322167 10322174 6 101 2.5 6.5 4.5 1.1 109 chr2R 10322065 3` UTR Ndg + chr2R 10322120 intergenic Ndg + chr2R 10322174 intergenic Ndg + chr2R_6_10320001 chr2R_10320001 RAL-426 837 chr2R 10352651 10352705 chr2R 10352748 10352798 11 90 4.0 2.5 3.2 2.6 147 chr2R 10352651 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352724 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352798 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_11_10350001 chr2R_10350001 RAL-426 838 chr2R 10354259 10354308 chr2R 10354358 10354407 6 99 5.5 6.5 6.0 0.9 148 chr2R 10354259 intron,3` UTR CG42732 -,CG12907 + chr2R 10354333 intron,3` UTR CG42732 -,CG12907 + chr2R 10354407 intron CG42732 - chr2R_6_10350001 chr2R_10350001 RAL-426 839 chr2R 10363855 10363886 chr2R 10363954 10363985 9 98 8.5 11.0 9.8 0.8 130 chr2R 10363855 intron CG42732 - chr2R 10363920 intron CG42732 - chr2R 10363985 intron CG42732 - chr2R_9_10360001 chr2R_10360001 RAL-426 840 chr2R 10411785 10411835 chr2R 10411887 10411935 5 101 11.5 13.5 12.5 0.4 150 chr2R 10411785 intron CG42732 - chr2R 10411860 intron CG42732 - chr2R 10411935 intron CG42732 - chr2R_5_10410001 chr2R_10410001 RAL-426 841 chr2R 10429012 10429049 chr2R 10429109 10429142 8 95 7.0 12.0 9.5 0.8 130 chr2R 10429012 intergenic not near genes chr2R 10429077 intergenic not near genes chr2R 10429142 intergenic not near genes chr2R_8_10425001 chr2R_10425001 RAL-426 842 chr2R 10454088 10454130 chr2R 10454176 10454223 18 95 6.5 6.0 6.2 2.5 135 chr2R 10454088 intron,intron Galphao +,Cyp49a1 - chr2R 10454156 intron,intron Galphao +,Cyp49a1 - chr2R 10454223 intron,intron Galphao +,Cyp49a1 - chr2R_18_10450001 chr2R_10450001 RAL-426 843 chr2R 10469011 10469053 chr2R 10469147 10469199 20 141 5.0 6.0 5.5 3.1 188 chr2R 10469011 intron CG11777 + chr2R 10469105 intron CG11777 + chr2R 10469199 intron CG11777 + chr2R_20_10465001 chr2R_10465001 RAL-426 844 chr2R 10546548 10546635 chr2R 10546659 10546732 9 109 4.0 4.5 4.2 1.7 184 chr2R 10546548 intergenic not near genes chr2R 10546640 intergenic not near genes chr2R 10546732 intergenic not near genes chr2R_9_10545001 chr2R_10545001 RAL-426 845 chr2R 10585582 10585590 chr2R 10594150 10594180 Tirant 4 8586 4.5 3.5 4.0 0.8 8598 chr2R 10585582 intron psq + chr2R 10589881 intron psq + chr2R 10594180 intron psq + chr2R_4_10585001 chr2R_10585001 RAL-426 846 chr2R 10595864 10595893 chr2R 10595978 10595987 4 107 8.0 5.5 6.8 0.5 123 chr2R 10595864 intron psq + chr2R 10595926 intron psq + chr2R 10595987 intron psq + chr2R_4_10595001 chr2R_10595001 RAL-426 847 chr2R 10644046 10644089 chr2R 10644142 10644187 17 98 1.5 0.0 0.8 9.4 141 chr2R 10644046 intron Git - chr2R 10644116 intron Git - chr2R 10644187 intron Git - chr2R_17_10640001 chr2R_10640001 RAL-426 848 chr2R 10743412 10743446 chr2R 10743515 10743545 5 100 12.5 8.5 10.5 0.4 133 chr2R 10743412 intron CG33144 - chr2R 10743478 intron CG33144 - chr2R 10743545 intron CG33144 - chr2R_5_10740001 chr2R_10740001 RAL-426 849 chr2R 10758796 10758825 chr2R 10758915 10758940 7 115 5.0 11.5 8.2 0.8 144 chr2R 10758796 intron CG33144 - chr2R 10758868 intron CG33144 - chr2R 10758940 intron CG33144 - chr2R_7_10755001 chr2R_10755001 RAL-426 850 chr2R 10761542 10761585 chr2R 10761716 10761759 9 172 17.0 11.0 14.0 0.6 217 chr2R 10761542 intron,5` UTR CG33144 -,CR43605 + chr2R 10761650 intron,5` UTR CG33144 -,CR43605 + chr2R 10761759 intron CG33144 - chr2R_9_10760001 chr2R_10760001 RAL-426 851 chr2R 10790131 10790173 chr2R 10790230 10790281 14 104 4.5 0.5 2.5 4.0 150 chr2R 10790131 intron CG33144 - chr2R 10790206 intron CG33144 - chr2R 10790281 intron CG33144 - chr2R_14_10790001 chr2R_10790001 RAL-426 852 chr2R 10795994 10796028 chr2R 10796096 10796130 7 101 12.0 2.0 7.0 0.9 136 chr2R 10795994 intron CG33144 - chr2R 10796062 intron CG33144 - chr2R 10796130 intron CG33144 - chr2R_7_10795001 chr2R_10795001 RAL-426 853 chr2R 10809373 10809406 chr2R 10809551 10809588 5 181 16.0 16.5 16.2 0.3 215 chr2R 10809373 intergenic CG12935 +,wde - chr2R 10809480 5` UTR CG12935 + chr2R 10809588 5` UTR CG12935 + chr2R_5_10805001 chr2R_10805001 RAL-426 854 chr2R 10827337 10827362 chr2R 10827424 10827470 11 102 3.0 4.5 3.8 2.3 133 chr2R 10827337 exon CG12325 + chr2R 10827404 3` UTR CG12325 + chr2R 10827470 3` UTR,3` UTR CG12325 +,CG12344 - chr2R_11_10825001 chr2R_10825001 RAL-426 855 chr2R 10851164 10851213 chr2R 10851269 10851293 4 98 11.5 7.5 9.5 0.4 129 chr2R 10851164 intron CG30015 - chr2R 10851228 intron CG30015 - chr2R 10851293 intron CG30015 - chr2R_4_10850001 chr2R_10850001 RAL-426 856 chr2R 10947076 10947087 chr2R 10947183 10947183 4 102 9.5 0.0 4.8 0.7 107 chr2R 10947076 5` UTR CR45228 + chr2R 10947130 intergenic CR45228 + chr2R 10947183 intergenic CR45228 + chr2R_4_10945001 chr2R_10945001 RAL-426 857 chr2R 10959037 10959090 chr2R 10959138 10959184 9 99 1.5 4.0 2.8 2.4 147 chr2R 10959037 intergenic not near genes chr2R 10959110 intergenic not near genes chr2R 10959184 intergenic not near genes chr2R_9_10955001 chr2R_10955001 RAL-426 858 chr2R 10976418 10976444 chr2R 10976498 10976548 4 98 8.5 8.5 8.5 0.4 130 chr2R 10976418 intergenic not near genes chr2R 10976483 intergenic not near genes chr2R 10976548 intergenic not near genes chr2R_4_10975001 chr2R_10975001 RAL-426 859 chr2R 10979649 10979685 chr2R 10980131 10980173 297 6 482 0.5 4.0 2.2 1.9 524 chr2R 10979649 intergenic not near genes chr2R 10979911 intergenic not near genes chr2R 10980173 intergenic not near genes chr2R_6_10975001 chr2R_10975001 RAL-426 860 chr2R 11009802 11009816 chr2R 11018996 11019008 roo 4 9191 7.0 8.5 7.8 0.5 9206 chr2R 11009802 intron luna - chr2R 11014405 intron luna - chr2R 11019008 intron luna - chr2R_4_11010001 chr2R_11010001 RAL-426 861 chr2R 11019877 11019902 chr2R 11024947 11024988 jockey 5 5071 4.0 5.0 4.5 0.9 5111 chr2R 11019877 intron luna - chr2R 11022432 intron luna - chr2R 11024988 intron luna - chr2R_5_11020001 chr2R_11020001 RAL-426 862 chr2R 11032626 11032645 chr2R 11032740 11032750 4 110 7.5 6.5 7.0 0.5 124 chr2R 11032626 intron luna - chr2R 11032688 intron luna - chr2R 11032750 intron luna - chr2R_4_11030001 chr2R_11030001 RAL-426 863 chr2R 11058764 11058804 chr2R 11058862 11058902 7 97 11.5 14.5 13.0 0.5 138 chr2R 11058764 intron luna - chr2R 11058833 intron luna - chr2R 11058902 intron luna - chr2R_7_11055001 chr2R_11055001 RAL-426 864 chr2R 11134090 11134140 chr2R 11134351 11134401 pogo 8 261 1.5 1.5 1.5 3.2 311 chr2R 11134090 intergenic not near genes chr2R 11134246 intergenic not near genes chr2R 11134401 intergenic not near genes chr2R_8_11130001 chr2R_11130001 RAL-426 865 chr2R 11144274 11144317 chr2R 11144391 11144437 6 116 12.5 8.5 10.5 0.5 163 chr2R 11144274 intron CG13229 - chr2R 11144356 intron CG13229 - chr2R 11144437 intron CG13229 - chr2R_6_11140001 chr2R_11140001 RAL-426 866 chr2R 11171516 11171555 chr2R 11171692 11171732 4 177 5.0 5.0 5.0 0.7 216 chr2R 11171516 intron,intron CG13229 -,shn + chr2R 11171624 intron,intron CG13229 -,shn + chr2R 11171732 intron,intron CG13229 -,shn + chr2R_4_11170001 chr2R_11170001 RAL-426 867 chr2R 11207797 11207845 chr2R 11208011 11208058 BS 10 211 9.5 4.5 7.0 1.2 261 chr2R 11207797 intron shn + chr2R 11207928 intron shn + chr2R 11208058 intron shn + chr2R_10_11205001 chr2R_11205001 RAL-426 868 chr2R 11249156 11249162 chr2R 11249302 11249308 4 146 15.0 9.5 12.2 0.3 152 chr2R 11249156 intergenic CG43112 + chr2R 11249232 intergenic CG43112 + chr2R 11249308 intergenic CG43112 + chr2R_4_11245001 chr2R_11245001 RAL-426 869 chr2R 11263828 11263839 chr2R 11263964 11263975 4 136 0.0 6.5 3.2 1.0 147 chr2R 11263828 intergenic not near genes chr2R 11263902 intergenic not near genes chr2R 11263975 intergenic not near genes chr2R_4_11260001 chr2R_11260001 RAL-426 870 chr2R 11276783 11276816 chr2R 11276971 11276991 6 184 5.0 4.0 4.5 1.1 208 chr2R 11276783 intergenic not near genes chr2R 11276887 intergenic not near genes chr2R 11276991 intergenic not near genes chr2R_6_11275001 chr2R_11275001 RAL-426 871 chr2R 11372751 11372767 chr2R 11372856 11372860 5 114 13.5 3.5 8.5 0.5 109 chr2R 11372751 intergenic not near genes chr2R 11372806 intergenic not near genes chr2R 11372860 intergenic not near genes chr2R_5_11370001 chr2R_11370001 RAL-426 872 chr2R 11391239 11391267 chr2R 11391335 11391363 8 95 14.5 12.0 13.2 0.6 124 chr2R 11391239 intron sprt - chr2R 11391301 intron sprt - chr2R 11391363 intron sprt - chr2R_8_11390001 chr2R_11390001 RAL-426 873 chr2R 11415500 11415551 chr2R 11418669 11418720 opus 14 3160 1.5 6.0 3.8 2.9 3220 chr2R 11415500 intron Drip - chr2R 11417110 intron Drip - chr2R 11418720 intron Drip - chr2R_14_11415001 chr2R_11415001 RAL-426 874 chr2R 11472639 11472680 chr2R 11473844 11473891 pogo 14 1214 4.0 4.0 4.0 2.8 1252 chr2R 11472639 intergenic not near genes chr2R 11473265 intergenic not near genes chr2R 11473891 intergenic not near genes chr2R_14_11470001 chr2R_11470001 RAL-426 875 chr2R 11480781 11480829 chr2R 11480894 11480933 5 108 0.5 0.5 0.5 3.3 152 chr2R 11480781 intron inv + chr2R 11480857 intron inv + chr2R 11480933 intron inv + chr2R_5_11480001 chr2R_11480001 RAL-426 876 chr2R 11494583 11494633 chr2R 11494692 11494741 8 102 8.0 10.0 9.0 0.8 158 chr2R 11494583 intron inv + chr2R 11494662 intron inv + chr2R 11494741 intron inv + chr2R_8_11490001 chr2R_11490001 RAL-426 877 chr2R 11495937 11495952 chr2R 11496013 11496013 6 84 8.0 12.5 10.2 0.5 76 chr2R 11495937 intron inv + chr2R 11495975 intron inv + chr2R 11496013 intron inv + chr2R_6_11495001 chr2R_11495001 RAL-426 878 chr2R 11555406 11555422 chr2R 11555761 11555777 6 353 5.5 6.5 6.0 0.9 371 chr2R 11555406 intergenic not near genes chr2R 11555592 intergenic not near genes chr2R 11555777 intergenic not near genes chr2R_6_11555001 chr2R_11555001 RAL-426 879 chr2R 11660346 11660394 chr2R 11660483 11660531 6 137 0.0 1.0 0.5 4.0 185 chr2R 11660346 intron Roc2 - chr2R 11660438 intron Roc2 - chr2R 11660531 intron Roc2 - chr2R_6_11660001 chr2R_11660001 RAL-426 880 chr2R 11662826 11662851 chr2R 11663241 11663267 5 415 8.0 5.5 6.8 0.6 441 chr2R 11662826 intron Roc2 - chr2R 11663046 intron Roc2 - chr2R 11663267 intron Roc2 - chr2R_5_11660001 chr2R_11660001 RAL-426 881 chr2R 11672831 11672848 chr2R 11672938 11672952 5 105 14.0 16.5 15.2 0.3 121 chr2R 11672831 intron,exon Roc2 -,Tret1-1 + chr2R 11672892 intron,intron Roc2 -,Tret1-1 + chr2R 11672952 intron,intron Roc2 -,Tret1-1 + chr2R_5_11670001 chr2R_11670001 RAL-426 882 chr2R 11677878 11677894 chr2R 11677956 11677956 4 78 13.5 13.5 13.5 0.3 78 chr2R 11677878 intron,exon Roc2 -,Tret1-2 + chr2R 11677917 intron,3` UTR Roc2 -,Tret1-2 + chr2R 11677956 intron,3` UTR Roc2 -,Tret1-2 + chr2R_4_11675001 chr2R_11675001 RAL-426 883 chr2R 11732200 11732229 chr2R 11732293 11732341 6 103 6.5 5.0 5.8 0.9 141 chr2R 11732200 intergenic not near genes chr2R 11732270 intergenic not near genes chr2R 11732341 intergenic not near genes chr2R_6_11730001 chr2R_11730001 RAL-426 884 chr2R 11822961 11823005 chr2R 11823058 11823102 4 87 10.0 11.0 10.5 0.3 141 chr2R 11822961 intergenic not near genes chr2R 11823032 intergenic not near genes chr2R 11823102 intergenic not near genes chr2R_4_11820001 chr2R_11820001 RAL-426 885 chr2R 11826867 11826897 chr2R 11826997 11827029 5 131 5.0 3.0 4.0 1.0 162 chr2R 11826867 3` UTR CG13192 + chr2R 11826948 3` UTR CG13192 + chr2R 11827029 3` UTR CG13192 + chr2R_5_11825001 chr2R_11825001 RAL-426 886 chr2R 11928673 11928702 chr2R 11928771 11928800 4 98 0.0 5.0 2.5 1.1 127 chr2R 11928673 intergenic not near genes chr2R 11928736 intergenic not near genes chr2R 11928800 intergenic CR44312 - chr2R_4_11925001 chr2R_11925001 RAL-426 887 chr2R 11934078 11934100 chr2R 11934165 11934176 6 93 11.0 13.0 12.0 0.5 98 chr2R 11934078 intergenic not near genes chr2R 11934127 intergenic not near genes chr2R 11934176 intergenic not near genes chr2R_6_11930001 chr2R_11930001 RAL-426 888 chr2R 11985869 11985905 chr2R 11985990 11986027 8 122 7.0 9.0 8.0 0.9 158 chr2R 11985869 intergenic CG34231 +,RnrS - chr2R 11985948 intergenic CG34231 + chr2R 11986027 5` UTR CG34231 + chr2R_8_11985001 chr2R_11985001 RAL-426 889 chr2R 12016808 12016838 chr2R 12016911 12016919 7 96 15.5 18.5 17.0 0.4 111 chr2R 12016808 intron otk - chr2R 12016864 intron otk - chr2R 12016919 intron otk - chr2R_7_12015001 chr2R_12015001 RAL-426 890 chr2R 12124810 12124844 chr2R 12124913 12124947 7 103 10.5 6.0 8.2 0.8 137 chr2R 12124810 intergenic not near genes chr2R 12124878 intergenic not near genes chr2R 12124947 intergenic not near genes chr2R_7_12120001 chr2R_12120001 RAL-426 891 chr2R 12185990 12186036 chr2R 12186105 12186130 15 109 2.0 6.5 4.2 2.9 140 chr2R 12185990 intron Cyp6g1 + chr2R 12186060 intron Cyp6g1 + chr2R 12186130 intron Cyp6g1 + chr2R_15_12185001 chr2R_12185001 RAL-426 892 chr2R 12187483 12187484 chr2R 12190083 12190092 5 2601 67.0 74.0 70.5 0.1 2609 chr2R 12187483 exon Cyp6g1 + chr2R 12188788 exon Cyp6g2 - chr2R 12190092 exon Cyp6g2 - chr2R_5_12185001 chr2R_12185001 RAL-426 893 chr2R 12187477 12187522 chr2R 12190094 12190122 17 2614 95.5 71.0 83.2 0.2 2645 chr2R 12187477 exon Cyp6g1 + chr2R 12188800 exon Cyp6g2 - chr2R 12190122 exon Cyp6g2 - chr2R_17_12185001 chr2R_12185001 RAL-426 894 chr2R 12187472 12187510 chr2R 12190123 12190124 4 2625 88.5 60.5 74.5 0.1 2652 chr2R 12187472 exon Cyp6g1 + chr2R 12188798 exon Cyp6g2 - chr2R 12190124 exon Cyp6g2 - chr2R_4_12185001 chr2R_12185001 RAL-426 895 chr2R 12217567 12217603 chr2R 12217661 12217704 15 93 4.5 3.5 4.0 3.0 137 chr2R 12217567 intergenic not near genes chr2R 12217636 intergenic not near genes chr2R 12217704 intergenic not near genes chr2R_15_12215001 chr2R_12215001 RAL-426 896 chr2R 12240743 12240759 chr2R 12240836 12240847 5 94 7.5 4.5 6.0 0.7 104 chr2R 12240743 exon CG13170 + chr2R 12240795 3` UTR CG13170 + chr2R 12240847 intergenic CG13170 +,CG43315 + chr2R_5_12240001 chr2R_12240001 RAL-426 897 chr2R 12272302 12272355 chr2R 12272405 12272457 11 98 2.5 6.0 4.2 2.1 155 chr2R 12272302 intron Cam + chr2R 12272380 intron Cam + chr2R 12272457 intron Cam + chr2R_11_12270001 chr2R_12270001 RAL-426 898 chr2R 12363364 12363416 chr2R 12363816 12363850 20 448 5.5 2.5 4.0 4.0 486 chr2R 12363364 intergenic CG30043 + chr2R 12363607 intergenic CG30043 + chr2R 12363850 intergenic not near genes chr2R_20_12360001 chr2R_12360001 RAL-426 899 chr2R 12501699 12501721 chr2R 12503849 12503893 Rt1c 5 2165 1.0 2.5 1.8 1.8 2194 chr2R 12501699 intron fdl - chr2R 12502796 intron fdl - chr2R 12503893 intron fdl - chr2R_5_12500001 chr2R_12500001 RAL-426 900 chr2R 12504140 12504179 chr2R 12504223 12504276 10 95 14.0 15.5 14.8 0.6 136 chr2R 12504140 intron fdl - chr2R 12504208 intron fdl - chr2R 12504276 intron fdl - chr2R_10_12500001 chr2R_12500001 RAL-426 901 chr2R 12535837 12535858 chr2R 12535918 12535939 4 84 10.5 9.5 10.0 0.4 102 chr2R 12535837 intron fra + chr2R 12535888 intron fra + chr2R 12535939 intron fra + chr2R_4_12535001 chr2R_12535001 RAL-426 902 chr2R 12597038 12597079 chr2R 12597141 12597189 7 110 10.0 9.5 9.8 0.6 151 chr2R 12597038 intron Amph + chr2R 12597114 intron Amph + chr2R 12597189 intron Amph + chr2R_7_12595001 chr2R_12595001 RAL-426 903 chr2R 12597957 12597983 chr2R 12598056 12598072 11 104 11.0 12.0 11.5 0.9 115 chr2R 12597957 intron Amph + chr2R 12598014 intron Amph + chr2R 12598072 intron Amph + chr2R_11_12595001 chr2R_12595001 RAL-426 904 chr2R 12643781 12643814 chr2R 12643876 12643903 4 94 8.5 8.0 8.2 0.4 122 chr2R 12643781 intron CG8785 - chr2R 12643842 intron CG8785 - chr2R 12643903 exon CG8785 - chr2R_4_12640001 chr2R_12640001 RAL-426 905 chr2R 12707498 12707546 chr2R 12715884 12715932 roo 11 8385 1.5 3.5 2.5 3.1 8434 chr2R 12707498 intron CG42663 + chr2R 12711715 intron CG42663 + chr2R 12715932 intron CG42663 + chr2R_11_12710001 chr2R_12710001 RAL-426 906 chr2R 12726312 12726336 chr2R 12726423 12726423 5 105 16.0 14.5 15.2 0.3 111 chr2R 12726312 intron CG42663 + chr2R 12726368 intron CG42663 + chr2R 12726423 intron CG42663 + chr2R_5_12725001 chr2R_12725001 RAL-426 907 chr2R 12732015 12732057 chr2R 12732123 12732151 11 100 3.0 8.0 5.5 1.7 136 chr2R 12732015 intron CG42663 + chr2R 12732083 intron CG42663 + chr2R 12732151 intron CG42663 + chr2R_11_12730001 chr2R_12730001 RAL-426 908 chr2R 12789279 12789323 chr2R 12797661 12797687 roo 12 8372 2.5 4.0 3.2 2.9 8408 chr2R 12789279 intron,3` UTR sca +,CR45137 - chr2R 12793483 intron,intron sca +,CR45137 - chr2R 12797687 intron,3` UTR sca +,CR45137 - chr2R_12_12790001 chr2R_12790001 RAL-426 909 chr2R 12798137 12798174 chr2R 12798614 12798651 5 477 9.5 8.5 9.0 0.5 514 chr2R 12798137 intron,3` UTR sca +,CR45137 - chr2R 12798394 intron,3` UTR sca +,CR45137 - chr2R 12798651 intron,3` UTR sca +,CR45137 - chr2R_5_12795001 chr2R_12795001 RAL-426 910 chr2R 12819437 12819473 chr2R 12824526 12824553 jockey 6 5081 3.0 3.5 3.2 1.4 5116 chr2R 12819437 intergenic not near genes chr2R 12821995 intergenic not near genes chr2R 12824553 intergenic not near genes chr2R_6_12820001 chr2R_12820001 RAL-426 911 chr2R 12825165 12825208 chr2R 12825265 12825311 13 99 6.0 7.5 6.8 1.7 146 chr2R 12825165 intergenic not near genes chr2R 12825238 intergenic not near genes chr2R 12825311 intergenic not near genes chr2R_13_12825001 chr2R_12825001 RAL-426 912 chr2R 12855581 12855627 chr2R 12855678 12855707 8 96 11.5 9.5 10.5 0.7 126 chr2R 12855581 intron CG17574 - chr2R 12855644 intron CG17574 - chr2R 12855707 intron CG17574 - chr2R_8_12855001 chr2R_12855001 RAL-426 913 chr2R 12897463 12897483 chr2R 12897574 12897594 5 111 6.0 6.5 6.2 0.7 131 chr2R 12897463 intron vg + chr2R 12897528 intron vg + chr2R 12897594 intron vg + chr2R_5_12895001 chr2R_12895001 RAL-426 914 chr2R 13081533 13081549 chr2R 13081617 13081646 4 87 9.0 10.0 9.5 0.4 113 chr2R 13081533 intergenic not near genes chr2R 13081590 intergenic not near genes chr2R 13081646 intergenic not near genes chr2R_4_13080001 chr2R_13080001 RAL-426 915 chr2R 13089758 13089782 chr2R 13089862 13089873 7 105 9.5 7.0 8.2 0.8 115 chr2R 13089758 intergenic not near genes chr2R 13089816 intergenic not near genes chr2R 13089873 intergenic not near genes chr2R_7_13085001 chr2R_13085001 RAL-426 916 chr2R 13121153 13121166 chr2R 13121239 13121272 5 97 14.5 7.5 11.0 0.4 119 chr2R 13121153 intron CG13325 + chr2R 13121212 intron CG13325 + chr2R 13121272 intron CG13325 + chr2R_5_13120001 chr2R_13120001 RAL-426 917 chr2R 13136820 13136863 chr2R 13141637 13141680 Doc 11 4817 6.5 4.5 5.5 1.7 4860 chr2R 13136820 exon Cap-G + chr2R 13139250 intron Cap-G + chr2R 13141680 intron Cap-G + chr2R_11_13135001 chr2R_13135001 RAL-426 918 chr2R 13167414 13167446 chr2R 13167527 13167560 10 114 5.0 0.0 2.5 2.9 146 chr2R 13167414 intron GLaz - chr2R 13167487 intron GLaz - chr2R 13167560 intron GLaz - chr2R_10_13165001 chr2R_13165001 RAL-426 919 chr2R 13249608 13249627 chr2R 13249690 13249691 4 91 10.5 11.5 11.0 0.3 83 chr2R 13249608 intron CG4712 - chr2R 13249650 intron CG4712 - chr2R 13249691 intron CG4712 - chr2R_4_13245001 chr2R_13245001 RAL-426 920 chr2R 13309655 13309671 chr2R 13309793 13309809 5 137 6.5 8.5 7.5 0.6 154 chr2R 13309655 intergenic not near genes chr2R 13309732 intergenic not near genes chr2R 13309809 intergenic not near genes chr2R_5_13305001 chr2R_13305001 RAL-426 921 chr2R 13321914 13321951 chr2R 13322040 13322077 6 124 6.5 5.5 6.0 0.9 163 chr2R 13321914 intergenic not near genes chr2R 13321996 intergenic not near genes chr2R 13322077 intergenic not near genes chr2R_6_13320001 chr2R_13320001 RAL-426 922 chr2R 13368772 13368784 chr2R 13368903 13368915 7 131 6.5 6.0 6.2 1.0 143 chr2R 13368772 intergenic not near genes chr2R 13368844 intergenic not near genes chr2R 13368915 intergenic not near genes chr2R_7_13365001 chr2R_13365001 RAL-426 923 chr2R 13375872 13375920 chr2R 13375993 13376041 6 121 8.0 8.0 8.0 0.7 169 chr2R 13375872 intergenic CG10814 - chr2R 13375956 intergenic CG10814 - chr2R 13376041 3` UTR CG10814 - chr2R_6_13375001 chr2R_13375001 RAL-426 924 chr2R 13431478 13431520 chr2R 13431575 13431593 4 91 9.0 9.5 9.2 0.4 115 chr2R 13431478 intron CG42321 - chr2R 13431536 intron CG42321 - chr2R 13431593 intron CG42321 - chr2R_4_13430001 chr2R_13430001 RAL-426 925 chr2R 13432935 13432963 chr2R 13433029 13433059 5 95 1.5 2.5 2.0 1.7 124 chr2R 13432935 intron CG42321 - chr2R 13432997 intron CG42321 - chr2R 13433059 intron,5` UTR CG42321 -,CG30065 + chr2R_5_13430001 chr2R_13430001 RAL-426 926 chr2R 13439089 13439230 chr2R 13439224 13439326 16 131 2.0 1.0 1.5 6.4 237 chr2R 13439089 intergenic CG42321 -,cnn - chr2R 13439208 intergenic cnn -,CG42321 - chr2R 13439326 3` UTR cnn - chr2R_16_13435001 chr2R_13435001 RAL-426 927 chr2R 13464019 13464028 chr2R 13464386 13464394 4 366 12.0 19.0 15.5 0.2 375 chr2R 13464019 intron arr - chr2R 13464206 intron arr - chr2R 13464394 intron arr - chr2R_4_13460001 chr2R_13460001 RAL-426 928 chr2R 13566254 13566278 chr2R 13566342 13566378 4 96 10.0 6.5 8.2 0.4 124 chr2R 13566254 intergenic not near genes chr2R 13566316 intergenic not near genes chr2R 13566378 intergenic not near genes chr2R_4_13565001 chr2R_13565001 RAL-426 929 chr2R 13580481 13580532 chr2R 13580851 13580879 jockey 9 364 0.0 3.5 1.8 3.2 398 chr2R 13580481 3` UTR CG6191 - chr2R 13580680 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580879 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_9_13580001 chr2R_13580001 RAL-426 930 chr2R 13635699 13635712 chr2R 13635780 13635796 4 92 5.5 13.0 9.2 0.4 97 chr2R 13635699 intron fas + chr2R 13635748 intron fas + chr2R 13635796 intron fas + chr2R_4_13635001 chr2R_13635001 RAL-426 931 chr2R 13682831 13682882 chr2R 13683042 13683043 6 202 10.0 6.5 8.2 0.7 212 chr2R 13682831 intron fas + chr2R 13682937 intron fas + chr2R 13683043 intron fas + chr2R_6_13680001 chr2R_13680001 RAL-426 932 chr2R 13684251 13684270 chr2R 13684347 13684369 4 97 4.0 0.5 2.2 1.2 118 chr2R 13684251 intron fas + chr2R 13684310 intron fas + chr2R 13684369 intron fas + chr2R_4_13680001 chr2R_13680001 RAL-426 933 chr2R 13694617 13694644 chr2R 13694703 13694740 6 93 10.0 11.0 10.5 0.5 123 chr2R 13694617 intron fas + chr2R 13694678 intron fas + chr2R 13694740 intron fas + chr2R_6_13690001 chr2R_13690001 RAL-426 934 chr2R 13749490 13749512 chr2R 13749597 13749610 6 104 13.5 12.5 13.0 0.4 120 chr2R 13749490 intergenic fas + chr2R 13749550 intergenic fas + chr2R 13749610 intergenic fas + chr2R_6_13745001 chr2R_13745001 RAL-426 935 chr2R 13768980 13769004 chr2R 13769099 13769123 8 119 2.5 11.0 6.8 1.0 143 chr2R 13768980 intergenic not near genes chr2R 13769052 intergenic not near genes chr2R 13769123 intergenic not near genes chr2R_8_13765001 chr2R_13765001 RAL-426 936 chr2R 13817641 13817690 chr2R 13817737 13817779 4 97 2.0 0.0 1.0 2.0 138 chr2R 13817641 intron stj + chr2R 13817710 intron stj + chr2R 13817779 intron stj + chr2R_4_13815001 chr2R_13815001 RAL-426 937 chr2R 13905589 13905636 chr2R 13907580 13907597 Rt1a 7 1989 1.5 2.5 2.0 2.3 2008 chr2R 13905589 intron shot - chr2R 13906593 intron shot - chr2R 13907597 intron shot - chr2R_7_13905001 chr2R_13905001 RAL-426 938 chr2R 13925856 13925890 chr2R 13926030 13926064 9 171 1.5 3.5 2.5 2.6 208 chr2R 13925856 intron shot - chr2R 13925960 intron shot - chr2R 13926064 intron shot - chr2R_9_13925001 chr2R_13925001 RAL-426 939 chr2R 14018152 14018192 chr2R 14018256 14018281 6 102 1.5 7.0 4.2 1.2 129 chr2R 14018152 intron mam + chr2R 14018216 intron mam + chr2R 14018281 intron mam + chr2R_6_14015001 chr2R_14015001 RAL-426 940 chr2R 14078088 14078102 chr2R 14078189 14078203 5 101 6.0 8.5 7.2 0.6 115 chr2R 14078088 intron Prosap - chr2R 14078146 intron Prosap - chr2R 14078203 intron Prosap - chr2R_5_14075001 chr2R_14075001 RAL-426 941 chr2R 14093417 14093450 chr2R 14109588 14109591 5 16165 8.0 3.0 5.5 0.8 16174 chr2R 14093417 intron Prosap - chr2R 14101504 intron Prosap - chr2R 14109591 intron Prosap - chr2R_5_14100001 chr2R_14100001 RAL-426 942 chr2R 14128854 14128878 chr2R 14129044 14129081 6 201 11.0 12.0 11.5 0.5 227 chr2R 14128854 intron Prosap - chr2R 14128968 intron Prosap - chr2R 14129081 intron Prosap - chr2R_6_14125001 chr2R_14125001 RAL-426 943 chr2R 14141939 14141956 chr2R 14142064 14142071 5 123 4.0 7.0 5.5 0.8 132 chr2R 14141939 intergenic not near genes chr2R 14142005 intergenic not near genes chr2R 14142071 intergenic not near genes chr2R_5_14140001 chr2R_14140001 RAL-426 944 chr2R 14142426 14142474 chr2R 14142536 14142584 8 110 9.0 3.0 6.0 1.1 158 chr2R 14142426 intergenic not near genes chr2R 14142505 intergenic not near genes chr2R 14142584 intergenic not near genes chr2R_8_14140001 chr2R_14140001 RAL-426 945 chr2R 14266742 14266872 chr2R 14266836 14266970 10 89 7.5 6.5 7.0 1.2 228 chr2R 14266742 intron CG8547 - chr2R 14266856 intron CG8547 - chr2R 14266970 intron CG8547 - chr2R_10_14265001 chr2R_14265001 RAL-426 946 chr2R 14277566 14277611 chr2R 14277666 14277713 9 98 15.5 21.0 18.2 0.5 147 chr2R 14277566 5` UTR Ih + chr2R 14277640 5` UTR Ih + chr2R 14277713 5` UTR Ih + chr2R_9_14275001 chr2R_14275001 RAL-426 947 chr2R 14290272 14290301 chr2R 14290383 14290392 4 106 8.0 6.5 7.2 0.5 120 chr2R 14290272 intron Ih + chr2R 14290332 intron Ih + chr2R 14290392 intron Ih + chr2R_4_14290001 chr2R_14290001 RAL-426 948 chr2R 14378968 14379014 chr2R 14379452 14379498 6 479 12.5 12.0 12.2 0.5 530 chr2R 14378968 intron Dh44-R1 + chr2R 14379233 intron Dh44-R1 + chr2R 14379498 intron Dh44-R1 + chr2R_6_14375001 chr2R_14375001 RAL-426 949 chr2R 14386424 14386462 chr2R 14386531 14386566 9 106 7.0 11.5 9.2 0.9 142 chr2R 14386424 intergenic not near genes chr2R 14386495 intergenic not near genes chr2R 14386566 intergenic not near genes chr2R_9_14385001 chr2R_14385001 RAL-426 950 chr2R 14389406 14389422 chr2R 14389481 14389521 5 87 12.5 10.5 11.5 0.4 115 chr2R 14389406 intergenic not near genes chr2R 14389464 intergenic not near genes chr2R 14389521 intergenic not near genes chr2R_5_14385001 chr2R_14385001 RAL-426 951 chr2R 14393879 14393893 chr2R 14393953 14393985 4 90 11.0 8.5 9.8 0.4 106 chr2R 14393879 intergenic not near genes chr2R 14393932 intergenic not near genes chr2R 14393985 intergenic not near genes chr2R_4_14390001 chr2R_14390001 RAL-426 952 chr2R 14394204 14394228 chr2R 14399014 14399037 Doc 5 4809 8.0 1.5 4.8 0.9 4833 chr2R 14394204 intergenic not near genes chr2R 14396620 intergenic not near genes chr2R 14399037 intergenic not near genes chr2R_5_14395001 chr2R_14395001 RAL-426 953 chr2R 14443826 14443922 chr2R 14443927 14444028 4 99 9.5 9.5 9.5 0.4 202 chr2R 14443826 intron Oaz + chr2R 14443927 intron Oaz + chr2R 14444028 intron Oaz + chr2R_4_14440001 chr2R_14440001 RAL-426 954 chr2R 14467287 14467324 chr2R 14476465 14476501 roo 13 9176 2.0 5.0 3.5 2.9 9214 chr2R 14467287 intergenic not near genes chr2R 14471894 intergenic not near genes chr2R 14476501 5` UTR CR44462 + chr2R_13_14470001 chr2R_14470001 RAL-426 955 chr2R 14497377 14497415 chr2R 14498560 14498606 1360 4 1192 1.5 2.0 1.8 1.4 1229 chr2R 14497377 3` UTR Cpsf160 - chr2R 14497992 intron Cpsf160 - chr2R 14498606 3` UTR Cpsf160 - chr2R_4_14495001 chr2R_14495001 RAL-426 956 chr2R 14530351 14530376 chr2R 14530460 14530485 4 107 10.5 7.5 9.0 0.4 134 chr2R 14530351 intron ttv + chr2R 14530418 intron ttv + chr2R 14530485 intron ttv + chr2R_4_14530001 chr2R_14530001 RAL-426 957 chr2R 14530736 14530776 chr2R 14530830 14530878 7 96 11.0 11.0 11.0 0.6 142 chr2R 14530736 intron ttv + chr2R 14530807 intron ttv + chr2R 14530878 intron ttv + chr2R_7_14530001 chr2R_14530001 RAL-426 958 chr2R 14541232 14541251 chr2R 14541509 14541521 4 271 11.0 13.0 12.0 0.3 289 chr2R 14541232 intron ttv + chr2R 14541376 intron ttv + chr2R 14541521 intron ttv + chr2R_4_14540001 chr2R_14540001 RAL-426 959 chr2R 14566432 14566473 chr2R 14566539 14566579 11 106 14.5 11.5 13.0 0.8 147 chr2R 14566432 intron ttv + chr2R 14566506 intron ttv + chr2R 14566579 intron ttv + chr2R_11_14565001 chr2R_14565001 RAL-426 960 chr2R 14698046 14698080 chr2R 14698169 14698203 4 123 5.5 11.5 8.5 0.4 157 chr2R 14698046 intron mspo - chr2R 14698124 intron mspo - chr2R 14698203 intron mspo - chr2R_4_14695001 chr2R_14695001 RAL-426 961 chr2R 14733396 14733425 chr2R 14733484 14733489 4 86 11.5 5.5 8.5 0.4 93 chr2R 14733396 intergenic not near genes chr2R 14733442 intergenic not near genes chr2R 14733489 intergenic not near genes chr2R_4_14730001 chr2R_14730001 RAL-426 962 chr2R 14842372 14842392 chr2R 14842487 14842507 6 116 8.5 10.0 9.2 0.6 135 chr2R 14842372 intergenic NaPi-T - chr2R 14842440 intergenic NaPi-T - chr2R 14842507 intergenic NaPi-T - chr2R_6_14840001 chr2R_14840001 RAL-426 963 chr2R 14850046 14850055 chr2R 14850166 14850166 4 120 36.0 31.0 33.5 0.1 120 chr2R 14850046 exon SMC2 - chr2R 14850106 exon SMC2 - chr2R 14850166 exon SMC2 - chr2R_4_14850001 chr2R_14850001 RAL-426 964 chr2R 14850058 14850087 chr2R 14850161 14850210 16 119 29.5 29.0 29.2 0.5 152 chr2R 14850058 exon SMC2 - chr2R 14850134 intron SMC2 - chr2R 14850210 exon SMC2 - chr2R_16_14850001 chr2R_14850001 RAL-426 965 chr2R 14873673 14873716 chr2R 14875209 14875242 9 1532 7.5 13.0 10.2 0.8 1569 chr2R 14873673 intergenic Cyp6a22 +,Cyp6a17 + chr2R 14874458 exon Cyp6a17 + chr2R 14875242 exon Cyp6a17 + chr2R_9_14870001 chr2R_14870001 RAL-426 966 chr2R 14875233 14875255 chr2R 14875663 14875687 4 430 11.5 14.0 12.8 0.3 454 chr2R 14875233 exon Cyp6a17 + chr2R 14875460 exon Cyp6a17 + chr2R 14875687 3` UTR Cyp6a17 + chr2R_4_14875001 chr2R_14875001 RAL-426 967 chr2R 14911688 14911724 chr2R 14911830 14911867 12 142 3.5 3.0 3.2 2.9 179 chr2R 14911688 intron CG10249 - chr2R 14911778 intron CG10249 - chr2R 14911867 intron CG10249 - chr2R_12_14910001 chr2R_14910001 RAL-426 968 chr2R 14917242 14917263 chr2R 14917351 14917373 4 107 7.0 9.5 8.2 0.4 131 chr2R 14917242 intron CG10249 - chr2R 14917308 intron CG10249 - chr2R 14917373 intron CG10249 - chr2R_4_14915001 chr2R_14915001 RAL-426 969 chr2R 14917641 14917688 chr2R 14917845 14917875 10 196 16.5 10.0 13.2 0.7 234 chr2R 14917641 intron CG10249 - chr2R 14917758 intron CG10249 - chr2R 14917875 intron CG10249 - chr2R_10_14915001 chr2R_14915001 RAL-426 970 chr2R 14922123 14922174 chr2R 14922219 14922268 21 93 5.0 2.5 3.8 4.4 145 chr2R 14922123 intron CG10249 - chr2R 14922196 intron CG10249 - chr2R 14922268 intron CG10249 - chr2R_21_14920001 chr2R_14920001 RAL-426 971 chr2R 14954731 14954777 chr2R 14954827 14954871 8 94 4.0 4.5 4.2 1.5 140 chr2R 14954731 intron aPKC - chr2R 14954801 intron aPKC - chr2R 14954871 intron aPKC - chr2R_8_14950001 chr2R_14950001 RAL-426 972 chr2R 14955657 14955675 chr2R 14955766 14955784 4 108 8.5 2.0 5.2 0.6 127 chr2R 14955657 intron aPKC - chr2R 14955720 intron aPKC - chr2R 14955784 intron aPKC - chr2R_4_14955001 chr2R_14955001 RAL-426 973 chr2R 14968425 14968473 chr2R 14968523 14968573 8 93 12.0 12.0 12.0 0.6 148 chr2R 14968425 intron ckn + chr2R 14968499 intron ckn + chr2R 14968573 intron ckn + chr2R_8_14965001 chr2R_14965001 RAL-426 974 chr2R 15001585 15001625 chr2R 15001698 15001731 8 111 4.5 5.5 5.0 1.3 146 chr2R 15001585 intergenic not near genes chr2R 15001658 intergenic not near genes chr2R 15001731 intergenic not near genes chr2R_8_15000001 chr2R_15000001 RAL-426 975 chr2R 15004711 15004753 chr2R 15005060 15005102 jockey 11 348 3.0 3.5 3.2 2.6 391 chr2R 15004711 intergenic not near genes chr2R 15004906 intergenic not near genes chr2R 15005102 intergenic not near genes chr2R_11_15000001 chr2R_15000001 RAL-426 976 chr2R 15008608 15008624 chr2R 15008749 15008763 5 139 13.0 9.0 11.0 0.4 155 chr2R 15008608 intergenic not near genes chr2R 15008686 intergenic not near genes chr2R 15008763 intergenic not near genes chr2R_5_15005001 chr2R_15005001 RAL-426 977 chr2R 15015435 15015488 chr2R 15022879 15022930 mdg1 15 7440 4.0 1.5 2.8 3.9 7495 chr2R 15015435 intron hbs + chr2R 15019182 intron hbs + chr2R 15022930 intron hbs + chr2R_15_15015001 chr2R_15015001 RAL-426 978 chr2R 15043172 15043184 chr2R 15043293 15043305 5 121 14.0 11.0 12.5 0.4 133 chr2R 15043172 intergenic not near genes chr2R 15043238 intergenic not near genes chr2R 15043305 intergenic not near genes chr2R_5_15040001 chr2R_15040001 RAL-426 979 chr2R 15071024 15071031 chr2R 15071145 15071152 4 121 12.0 10.0 11.0 0.3 128 chr2R 15071024 intergenic not near genes chr2R 15071088 intergenic not near genes chr2R 15071152 intergenic not near genes chr2R_4_15070001 chr2R_15070001 RAL-426 980 chr2R 15084966 15085008 chr2R 15092030 15092039 297 9 7064 5.5 1.5 3.5 2.0 7073 chr2R 15084966 intergenic not near genes chr2R 15088502 intergenic not near genes chr2R 15092039 5` UTR CR44457 + chr2R_9_15085001 chr2R_15085001 RAL-426 981 chr2R 15119337 15119349 chr2R 15127797 15127844 Tirant 6 8479 5.0 3.0 4.0 1.2 8507 chr2R 15119337 intron chn + chr2R 15123590 intron chn + chr2R 15127844 intron chn + chr2R_6_15120001 chr2R_15120001 RAL-426 982 chr2R 15133464 15133489 chr2R 15133563 15133587 4 98 15.0 14.5 14.8 0.3 123 chr2R 15133464 intron chn + chr2R 15133526 intron chn + chr2R 15133587 intron chn + chr2R_4_15130001 chr2R_15130001 RAL-426 983 chr2R 15137955 15138000 chr2R 15138052 15138084 7 90 1.0 0.0 0.5 4.7 129 chr2R 15137955 intron chn + chr2R 15138020 intron chn + chr2R 15138084 intron chn + chr2R_7_15135001 chr2R_15135001 RAL-426 984 chr2R 15301853 15301899 chr2R 15301951 15301997 6 92 15.0 15.0 15.0 0.4 144 chr2R 15301853 intron Trpm - chr2R 15301925 intron Trpm - chr2R 15301997 intron Trpm - chr2R_6_15300001 chr2R_15300001 RAL-426 985 chr2R 15315723 15315750 chr2R 15315820 15315846 6 97 10.5 15.0 12.8 0.4 123 chr2R 15315723 exon mus210 + chr2R 15315784 exon mus210 + chr2R 15315846 exon mus210 + chr2R_6_15315001 chr2R_15315001 RAL-426 986 chr2R 15410771 15410793 chr2R 15410981 15411004 4 208 2.5 9.0 5.8 0.6 233 chr2R 15410771 intron CG43729 + chr2R 15410888 intron CG43729 + chr2R 15411004 intron CG43729 + chr2R_4_15410001 chr2R_15410001 RAL-426 987 chr2R 15534666 15534676 chr2R 15534760 15534775 5 98 16.5 12.0 14.2 0.3 109 chr2R 15534666 intron CG30471 + chr2R 15534720 intron CG30471 + chr2R 15534775 intron CG30471 + chr2R_5_15530001 chr2R_15530001 RAL-426 988 chr2R 15537693 15537742 chr2R 15537795 15537844 7 102 4.0 7.0 5.5 1.1 151 chr2R 15537693 3` UTR CG30471 + chr2R 15537768 3` UTR CG30471 + chr2R 15537844 intergenic CG30471 +,CG30467 + chr2R_7_15535001 chr2R_15535001 RAL-426 989 chr2R 15585752 15585779 chr2R 15585856 15585883 5 104 4.0 8.5 6.2 0.7 131 chr2R 15585752 intergenic not near genes chr2R 15585818 intergenic not near genes chr2R 15585883 intergenic not near genes chr2R_5_15585001 chr2R_15585001 RAL-426 990 chr2R 15654591 15654644 chr2R 15654719 15654770 10 128 11.5 8.5 10.0 0.9 179 chr2R 15654591 intron CG42524 + chr2R 15654680 intron CG42524 + chr2R 15654770 intron CG42524 + chr2R_10_15650001 chr2R_15650001 RAL-426 991 chr2R 15655973 15656068 chr2R 15656073 15656179 9 95 2.5 2.5 2.5 2.6 206 chr2R 15655973 intron CG42524 + chr2R 15656076 intron CG42524 + chr2R 15656179 intron CG42524 + chr2R_9_15655001 chr2R_15655001 RAL-426 992 chr2R 15675092 15675139 chr2R 15675188 15675227 7 95 9.0 8.5 8.8 0.7 135 chr2R 15675092 intron fus - chr2R 15675160 intron fus - chr2R 15675227 intron fus - chr2R_7_15675001 chr2R_15675001 RAL-426 993 chr2R 15679087 15679119 chr2R 15679191 15679223 5 104 4.5 4.0 4.2 1.0 136 chr2R 15679087 intergenic CG8207 -,Vha14-1 - chr2R 15679155 intergenic CG8207 -,Vha14-1 - chr2R 15679223 intergenic Vha14-1 -,CG8207 - chr2R_5_15675001 chr2R_15675001 RAL-426 994 chr2R 15697873 15697905 chr2R 15697974 15698006 7 101 11.5 5.5 8.5 0.7 133 chr2R 15697873 exon CG33462 + chr2R 15697940 3` UTR CG33462 + chr2R 15698006 3` UTR CG33462 + chr2R_7_15695001 chr2R_15695001 RAL-426 995 chr2R 15700007 15700269 chr2R 15700114 15700384 14 109 9.5 11.0 10.2 1.2 377 chr2R 15700007 3` UTR,5` UTR CG30080 -,CG42662 - chr2R 15700196 intron,5` UTR CG30080 -,CG42662 - chr2R 15700384 intron,5` UTR CG30080 -,CG42662 - chr2R_14_15700001 chr2R_15700001 RAL-426 996 chr2R 15810364 15810405 chr2R 15810460 15810462 5 86 7.5 12.5 10.0 0.5 98 chr2R 15810364 intron,intron Zasp52 -,tun + chr2R 15810413 intron,intron Zasp52 -,tun + chr2R 15810462 intron,intron Zasp52 -,tun + chr2R_5_15810001 chr2R_15810001 RAL-426 997 chr2R 15873842 15873883 chr2R 15873956 15873997 6 114 13.0 9.0 11.0 0.5 155 chr2R 15873842 intron sli - chr2R 15873920 intron sli - chr2R 15873997 intron sli - chr2R_6_15870001 chr2R_15870001 RAL-426 998 chr2R 15877950 15877985 chr2R 15878055 15878090 6 102 4.5 2.0 3.2 1.4 140 chr2R 15877950 intron sli - chr2R 15878020 intron sli - chr2R 15878090 intron sli - chr2R_6_15875001 chr2R_15875001 RAL-426 999 chr2R 16007830 16007868 chr2R 16007928 16007945 4 89 11.0 13.5 12.2 0.3 115 chr2R 16007830 intergenic CG8386 - chr2R 16007888 intergenic CG8386 -,CG8389 + chr2R 16007945 intergenic CG8386 -,CG8389 + chr2R_4_16005001 chr2R_16005001 RAL-426 1000 chr2R 16110485 16110529 chr2R 16110579 16110579 6 83 12.0 8.0 10.0 0.5 94 chr2R 16110485 5` UTR Asph + chr2R 16110532 5` UTR Asph + chr2R 16110579 5` UTR Asph + chr2R_6_16110001 chr2R_16110001 RAL-426 1001 chr2R 16120053 16120096 chr2R 16120156 16120199 10 97 11.5 14.0 12.8 0.7 146 chr2R 16120053 intron Jhe + chr2R 16120126 intron Jhe + chr2R 16120199 intron Jhe + chr2R_10_16120001 chr2R_16120001 RAL-426 1002 chr2R 16245630 16245649 chr2R 16245738 16245757 4 108 8.0 13.5 10.8 0.3 127 chr2R 16245630 intron CngA - chr2R 16245694 intron CngA - chr2R 16245757 intron CngA - chr2R_4_16245001 chr2R_16245001 RAL-426 1003 chr2R 16279356 16279407 chr2R 16279461 16279512 6 102 5.0 7.5 6.2 0.8 156 chr2R 16279356 intergenic not near genes chr2R 16279434 intergenic not near genes chr2R 16279512 intergenic not near genes chr2R_6_16275001 chr2R_16275001 RAL-426 1004 chr2R 16334658 16334696 chr2R 16334761 16334777 6 99 6.5 6.0 6.2 0.8 119 chr2R 16334658 intron Vha44 - chr2R 16334718 intron Vha44 - chr2R 16334777 intron Vha44 - chr2R_6_16330001 chr2R_16330001 RAL-426 1005 chr2R 16442870 16442912 chr2R 16442971 16442999 9 96 13.0 13.0 13.0 0.6 129 chr2R 16442870 intergenic CG4409 + chr2R 16442934 intergenic CG4409 + chr2R 16442999 intergenic CG4409 + chr2R_9_16440001 chr2R_16440001 RAL-426 1006 chr2R 16460477 16460764 chr2R 16460573 16460847 5 96 2.5 7.5 5.0 0.8 370 chr2R 16460477 intergenic not near genes chr2R 16460662 intergenic not near genes chr2R 16460847 intergenic not near genes chr2R_5_16460001 chr2R_16460001 RAL-426 1007 chr2R 16594841 16594850 chr2R 16594952 16594958 4 111 11.0 5.5 8.2 0.4 117 chr2R 16594841 intergenic CG8303 -,CG8306 - chr2R 16594900 intergenic CG8303 -,CG8306 - chr2R 16594958 intergenic CG8303 -,CG8306 - chr2R_4_16590001 chr2R_16590001 RAL-426 1008 chr2R 16596904 16596940 chr2R 16597086 16597117 5 176 7.0 4.5 5.8 0.7 213 chr2R 16596904 exon CG8303 - chr2R 16597010 intron CG8303 - chr2R 16597117 intron CG8303 - chr2R_5_16595001 chr2R_16595001 RAL-426 1009 chr2R 16601507 16601535 chr2R 16601637 16601666 5 127 11.5 14.0 12.8 0.4 159 chr2R 16601507 intron CG8303 - chr2R 16601586 intron CG8303 - chr2R 16601666 intron CG8303 - chr2R_5_16600001 chr2R_16600001 RAL-426 1010 chr2R 16641668 16641700 chr2R 16641770 16641782 8 99 16.0 16.0 16.0 0.5 114 chr2R 16641668 5` UTR gprs + chr2R 16641725 intron gprs + chr2R 16641782 intron gprs + chr2R_8_16640001 chr2R_16640001 RAL-426 1011 chr2R 16672769 16672805 chr2R 16672869 16672905 7 99 8.5 8.5 8.5 0.7 136 chr2R 16672769 exon CG34458 + chr2R 16672837 3` UTR CG34458 + chr2R 16672905 intergenic CG34458 +,CG30463 - chr2R_7_16670001 chr2R_16670001 RAL-426 1012 chr2R 16703752 16703798 chr2R 16703862 16703908 6 107 11.5 14.0 12.8 0.4 156 chr2R 16703752 intron CG30463 - chr2R 16703830 intron CG30463 - chr2R 16703908 intron CG30463 - chr2R_6_16700001 chr2R_16700001 RAL-426 1013 chr2R 16708970 16709002 chr2R 16709086 16709118 4 116 9.5 10.0 9.8 0.4 148 chr2R 16708970 intron CG30463 - chr2R 16709044 intron CG30463 - chr2R 16709118 intron CG30463 - chr2R_4_16705001 chr2R_16705001 RAL-426 1014 chr2R 16713055 16713066 chr2R 16713158 16713169 6 102 0.0 3.5 1.8 2.1 114 chr2R 16713055 intron CG30463 - chr2R 16713112 intron CG30463 - chr2R 16713169 intron CG30463 - chr2R_6_16710001 chr2R_16710001 RAL-426 1015 chr2R 16714457 16714558 chr2R 16714579 16714656 5 112 3.0 3.0 3.0 1.2 199 chr2R 16714457 intron CG30463 - chr2R 16714556 intron CG30463 - chr2R 16714656 intron CG30463 - chr2R_5_16710001 chr2R_16710001 RAL-426 1016 chr2R 16726675 16726686 chr2R 16726794 16726805 6 119 1.5 5.0 3.2 1.4 130 chr2R 16726675 intron CG30463 - chr2R 16726740 intron CG30463 - chr2R 16726805 intron CG30463 - chr2R_6_16725001 chr2R_16725001 RAL-426 1017 chr2R 16727931 16727975 chr2R 16728026 16728070 4 93 6.0 6.0 6.0 0.6 139 chr2R 16727931 intron CG30463 - chr2R 16728000 intron CG30463 - chr2R 16728070 intron CG30463 - chr2R_4_16725001 chr2R_16725001 RAL-426 1018 chr2R 16880446 16880482 chr2R 16880544 16880560 5 92 8.0 9.5 8.8 0.5 114 chr2R 16880446 intron CG8910 - chr2R 16880503 intron CG8910 - chr2R 16880560 intron CG8910 - chr2R_5_16880001 chr2R_16880001 RAL-426 1019 chr2R 17079034 17079088 chr2R 17079136 17079189 5 101 4.0 6.5 5.2 0.8 155 chr2R 17079034 intron CG30460 - chr2R 17079112 intron CG30460 - chr2R 17079189 intron CG30460 - chr2R_5_17075001 chr2R_17075001 RAL-426 1020 chr2R 17136113 17136129 chr2R 17136220 17136237 4 107 6.0 8.5 7.2 0.5 124 chr2R 17136113 intergenic Gbp + chr2R 17136175 intergenic Gbp + chr2R 17136237 intergenic Gbp + chr2R_4_17135001 chr2R_17135001 RAL-426 1021 chr2R 17136133 17136144 chr2R 17136214 17136252 4 101 5.5 6.5 6.0 0.6 119 chr2R 17136133 intergenic Gbp + chr2R 17136192 intergenic Gbp + chr2R 17136252 intergenic Gbp + chr2R_4_17135001 chr2R_17135001 RAL-426 1022 chr2R 17147226 17147267 chr2R 17152277 17152318 jockey 17 5050 5.0 9.0 7.0 2.1 5092 chr2R 17147226 intergenic not near genes chr2R 17149772 intergenic not near genes chr2R 17152318 intergenic not near genes chr2R_17_17145001 chr2R_17145001 RAL-426 1023 chr2R 17171013 17171064 chr2R 17171116 17171167 7 102 16.0 16.5 16.2 0.4 154 chr2R 17171013 intergenic not near genes chr2R 17171090 intergenic not near genes chr2R 17171167 intergenic not near genes chr2R_7_17170001 chr2R_17170001 RAL-426 1024 chr2R 17176365 17176374 chr2R 17182558 17182566 diver 4 6195 0.5 7.5 4.0 0.8 6201 chr2R 17176365 intergenic not near genes chr2R 17179466 intergenic not near genes chr2R 17182566 intergenic not near genes chr2R_4_17175001 chr2R_17175001 RAL-426 1025 chr2R 17214654 17214686 chr2R 17214764 17214806 6 112 9.5 10.5 10.0 0.5 152 chr2R 17214654 intergenic not near genes chr2R 17214730 intergenic not near genes chr2R 17214806 intergenic not near genes chr2R_6_17210001 chr2R_17210001 RAL-426 1026 chr2R 17221882 17221932 chr2R 17222094 17222143 13 209 9.0 14.0 11.5 1.0 261 chr2R 17221882 intron mbl + chr2R 17222012 intron mbl + chr2R 17222143 intron mbl + chr2R_13_17220001 chr2R_17220001 RAL-426 1027 chr2R 17236506 17236537 chr2R 17241710 17241754 copia 8 5219 1.5 3.5 2.5 2.3 5248 chr2R 17236506 intron mbl + chr2R 17239130 intron mbl + chr2R 17241754 intron mbl + chr2R_8_17235001 chr2R_17235001 RAL-426 1028 chr2R 17320995 17321022 chr2R 17321067 17321117 5 87 12.5 12.5 12.5 0.4 122 chr2R 17320995 intron mbl + chr2R 17321056 intron mbl + chr2R 17321117 intron mbl + chr2R_5_17320001 chr2R_17320001 RAL-426 1029 chr2R 17381566 17381614 chr2R 17381674 17381712 6 106 13.0 14.5 13.8 0.4 146 chr2R 17381566 intergenic not near genes chr2R 17381639 intergenic not near genes chr2R 17381712 intergenic not near genes chr2R_6_17380001 chr2R_17380001 RAL-426 1030 chr2R 17384500 17384539 chr2R 17384604 17384643 9 100 10.0 12.0 11.0 0.8 143 chr2R 17384500 intergenic not near genes chr2R 17384572 intergenic not near genes chr2R 17384643 intergenic not near genes chr2R_9_17380001 chr2R_17380001 RAL-426 1031 chr2R 17395267 17395300 chr2R 17395365 17395392 4 96 8.0 5.5 6.8 0.5 125 chr2R 17395267 intron Sip1 + chr2R 17395330 intron Sip1 + chr2R 17395392 intron Sip1 + chr2R_4_17395001 chr2R_17395001 RAL-426 1032 chr2R 17419909 17419952 chr2R 17420009 17420049 4 99 12.5 11.0 11.8 0.3 140 chr2R 17419909 5` UTR cnk - chr2R 17419979 5` UTR cnk - chr2R 17420049 intergenic cnk -,l(2)k01209 + chr2R_4_17415001 chr2R_17415001 RAL-426 1033 chr2R 17485906 17485917 chr2R 17490696 17490699 F-element 5 4787 6.5 2.0 4.2 1.0 4793 chr2R 17485906 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488302 intron NT5E-2 + chr2R 17490699 intron NT5E-2 + chr2R_5_17485001 chr2R_17485001 RAL-426 1034 chr2R 17500639 17500683 chr2R 17500734 17500779 4 94 11.0 9.5 10.2 0.4 140 chr2R 17500639 intergenic not near genes chr2R 17500709 intergenic not near genes chr2R 17500779 intergenic not near genes chr2R_4_17500001 chr2R_17500001 RAL-426 1035 chr2R 17629586 17629621 chr2R 17629685 17629720 7 99 5.5 5.0 5.2 1.1 134 chr2R 17629586 intron,intron CG10936 -,rhi - chr2R 17629653 intron,intron CG10936 -,rhi - chr2R 17629720 intron,intron CG10936 -,rhi - chr2R_7_17625001 chr2R_17625001 RAL-426 1036 chr2R 17667236 17667286 chr2R 17669873 17669925 17 2642 22.0 22.0 22.0 0.7 2689 chr2R 17667236 exon eIF3-S8 + chr2R 17668580 exon eIF3-S8 + chr2R 17669925 3` UTR CG30108 + chr2R_17_17665001 chr2R_17665001 RAL-426 1037 chr2R 17744799 17744817 chr2R 17746355 17746393 5 1570 12.5 27.5 20.0 0.2 1594 chr2R 17744799 exon Ir54a + chr2R 17745596 exon,3` UTR Ir54a +,sub - chr2R 17746393 exon sub - chr2R_5_17745001 chr2R_17745001 RAL-426 1038 chr2R 17762020 17762066 chr2R 17762121 17762133 10 96 13.0 11.5 12.2 0.8 113 chr2R 17762020 intron CG5009 + chr2R 17762076 intron CG5009 + chr2R 17762133 exon CG5009 + chr2R_10_17760001 chr2R_17760001 RAL-426 1039 chr2R 17782342 17782381 chr2R 17783565 17783604 pogo 4 1223 1.5 2.0 1.8 1.4 1262 chr2R 17782342 intergenic CG33981 -,fab1 - chr2R 17782973 intergenic not near genes chr2R 17783604 intergenic mir-31a - chr2R_4_17780001 chr2R_17780001 RAL-426 1040 chr2R 17784017 17784032 chr2R 17784276 17784288 pogo 4 258 5.5 4.0 4.8 0.7 271 chr2R 17784017 intergenic mir-31a - chr2R 17784152 intergenic mir-31a - chr2R 17784288 intergenic mir-31a - chr2R_4_17780001 chr2R_17780001 RAL-426 1041 chr2R 17784033 17784053 chr2R 17784271 17784298 pogo 6 246 3.0 2.5 2.8 1.6 265 chr2R 17784033 intergenic mir-31a - chr2R 17784166 intergenic mir-31a - chr2R 17784298 intergenic mir-31a - chr2R_6_17780001 chr2R_17780001 RAL-426 1042 chr2R 17896210 17896238 chr2R 17896306 17896334 5 93 8.5 6.5 7.5 0.6 124 chr2R 17896210 intron Elk + chr2R 17896272 intron Elk + chr2R 17896334 intron Elk + chr2R_5_17895001 chr2R_17895001 RAL-426 1043 chr2R 17968582 17968635 chr2R 17968706 17968738 13 119 9.5 12.0 10.8 1.1 156 chr2R 17968582 intergenic not near genes chr2R 17968660 intergenic not near genes chr2R 17968738 intergenic not near genes chr2R_13_17965001 chr2R_17965001 RAL-426 1044 chr2R 17997165 17997194 chr2R 17997242 17997296 10 92 6.0 4.5 5.2 1.6 131 chr2R 17997165 intron dpr13 - chr2R 17997230 intron dpr13 - chr2R 17997296 intron dpr13 - chr2R_10_17995001 chr2R_17995001 RAL-426 1045 chr2R 18023155 18023177 chr2R 18023254 18023275 4 102 16.5 16.5 16.5 0.2 120 chr2R 18023155 intergenic not near genes chr2R 18023215 intergenic not near genes chr2R 18023275 intergenic not near genes chr2R_4_18020001 chr2R_18020001 RAL-426 1046 chr2R 18023184 18023193 chr2R 18023247 18023269 5 88 15.5 15.5 15.5 0.3 85 chr2R 18023184 intergenic not near genes chr2R 18023226 intergenic not near genes chr2R 18023269 intergenic not near genes chr2R_5_18020001 chr2R_18020001 RAL-426 1047 chr2R 18031676 18031697 chr2R 18031788 18031808 4 112 4.5 6.5 5.5 0.6 132 chr2R 18031676 intergenic not near genes chr2R 18031742 intergenic not near genes chr2R 18031808 intergenic not near genes chr2R_4_18030001 chr2R_18030001 RAL-426 1048 chr2R 18035701 18035743 chr2R 18035801 18035844 6 99 10.5 10.0 10.2 0.5 143 chr2R 18035701 intergenic not near genes chr2R 18035772 intergenic not near genes chr2R 18035844 intergenic not near genes chr2R_6_18035001 chr2R_18035001 RAL-426 1049 chr2R 18111663 18111705 chr2R 18115551 18115592 F-element 5 3887 4.0 2.0 3.0 1.2 3929 chr2R 18111663 intergenic not near genes chr2R 18113628 intergenic not near genes chr2R 18115592 intergenic not near genes chr2R_5_18110001 chr2R_18110001 RAL-426 1050 chr2R 18168374 18168415 chr2R 18168504 18168544 5 129 10.0 5.0 7.5 0.6 170 chr2R 18168374 3` UTR,3` UTR CG42518 +,MED9 + chr2R 18168459 intergenic CG42518 +,MED9 +,Dgp-1 - chr2R 18168544 intergenic CG42518 +,MED9 +,Dgp-1 - chr2R_5_18165001 chr2R_18165001 RAL-426 1051 chr2R 18187645 18187679 chr2R 18187878 18187912 5 226 7.5 9.0 8.2 0.5 267 chr2R 18187645 intron CG33958 - chr2R 18187778 intron,exon CG33958 -,CG14499 + chr2R 18187912 intron,exon CG33958 -,CG14499 + chr2R_5_18185001 chr2R_18185001 RAL-426 1052 chr2R 18255675 18255715 chr2R 18255909 18255948 7 233 1.0 1.0 1.0 3.5 273 chr2R 18255675 intergenic not near genes chr2R 18255812 intergenic not near genes chr2R 18255948 intergenic not near genes chr2R_7_18255001 chr2R_18255001 RAL-426 1053 chr2R 18312361 18312391 chr2R 18312462 18312511 6 115 13.5 8.5 11.0 0.5 150 chr2R 18312361 intron sbb - chr2R 18312436 intron sbb - chr2R 18312511 intron sbb - chr2R_6_18310001 chr2R_18310001 RAL-426 1054 chr2R 18358376 18358416 chr2R 18372608 18372648 roo 10 14229 7.0 3.5 5.2 1.6 14272 chr2R 18358376 intergenic not near genes chr2R 18365512 intergenic not near genes chr2R 18372648 intergenic not near genes chr2R_10_18365001 chr2R_18365001 RAL-426 1055 chr2R 18376738 18376761 chr2R 18376848 18376860 5 107 7.5 13.5 10.5 0.4 122 chr2R 18376738 intergenic not near genes chr2R 18376799 intergenic not near genes chr2R 18376860 intergenic not near genes chr2R_5_18375001 chr2R_18375001 RAL-426 1056 chr2R 18387562 18387606 chr2R 18387663 18387703 7 99 5.5 7.5 6.5 0.9 141 chr2R 18387562 intergenic IM3 + chr2R 18387632 intergenic IM3 + chr2R 18387703 intergenic IM3 + chr2R_7_18385001 chr2R_18385001 RAL-426 1057 chr2R 18404366 18404403 chr2R 18404469 18404510 10 107 15.5 12.0 13.8 0.7 144 chr2R 18404366 intergenic GstE5 +,GstE4 + chr2R 18404438 intergenic GstE5 +,GstE4 + chr2R 18404510 intergenic GstE5 +,GstE4 + chr2R_10_18400001 chr2R_18400001 RAL-426 1058 chr2R 18435819 18435866 chr2R 18435916 18435940 10 94 9.5 12.0 10.8 0.8 121 chr2R 18435819 intron CG30118 - chr2R 18435880 intron CG30118 - chr2R 18435940 intron CG30118 - chr2R_10_18435001 chr2R_18435001 RAL-426 1059 chr2R 18483012 18483043 chr2R 18483270 18483302 7 256 4.0 4.0 4.0 1.4 290 chr2R 18483012 intron CG30116 - chr2R 18483157 intron CG30116 - chr2R 18483302 intron CG30116 - chr2R_7_18480001 chr2R_18480001 RAL-426 1060 chr2R 18487826 18487854 chr2R 18495294 18495344 blood 4 7475 0.0 7.5 3.8 0.8 7518 chr2R 18487826 intron CG30116 - chr2R 18491585 intron CG30116 - chr2R 18495344 intron CG30116 - chr2R_4_18490001 chr2R_18490001 RAL-426 1061 chr2R 18513295 18513334 chr2R 18513397 18513436 5 101 3.0 4.0 3.5 1.1 141 chr2R 18513295 intergenic not near genes chr2R 18513366 intergenic not near genes chr2R 18513436 intergenic not near genes chr2R_5_18510001 chr2R_18510001 RAL-426 1062 chr2R 18526573 18526624 chr2R 18526674 18526725 20 94 6.0 7.5 6.8 2.6 152 chr2R 18526573 intergenic CG43066 + chr2R 18526649 intergenic CG43066 + chr2R 18526725 intergenic CG43066 + chr2R_20_18525001 chr2R_18525001 RAL-426 1063 chr2R 18524100 18524151 chr2R 18526788 18526809 5 2665 35.5 28.0 31.8 0.2 2709 chr2R 18524100 intron CG43066 + chr2R 18525454 3` UTR CG43066 + chr2R 18526809 intergenic CG43066 + chr2R_5_18525001 chr2R_18525001 RAL-426 1064 chr2R 18575130 18575160 chr2R 18575367 18575378 7 234 5.5 9.5 7.5 0.8 248 chr2R 18575130 intron GEFmeso - chr2R 18575254 intron GEFmeso - chr2R 18575378 intron GEFmeso - chr2R_7_18575001 chr2R_18575001 RAL-426 1065 chr2R 18575801 18575829 chr2R 18581987 18582037 3S18 19 6197 3.5 6.0 4.8 3.3 6236 chr2R 18575801 intron GEFmeso - chr2R 18578919 intron GEFmeso - chr2R 18582037 intron GEFmeso - chr2R_19_18575001 chr2R_18575001 RAL-426 1066 chr2R 18590862 18590897 chr2R 18600022 18600025 roo 4 9153 3.5 5.5 4.5 0.7 9163 chr2R 18590862 intron GEFmeso - chr2R 18595444 intron GEFmeso - chr2R 18600025 intron GEFmeso - chr2R_4_18595001 chr2R_18595001 RAL-426 1067 chr2R 18646396 18646432 chr2R 18646561 18646587 7 162 3.0 3.5 3.2 1.7 191 chr2R 18646396 intron SP2637 - chr2R 18646492 intron SP2637 - chr2R 18646587 intron SP2637 - chr2R_7_18645001 chr2R_18645001 RAL-426 1068 chr2R 18652331 18652338 chr2R 18652432 18652437 5 101 2.5 3.0 2.8 1.3 106 chr2R 18652331 intron SP2637 - chr2R 18652384 intron SP2637 - chr2R 18652437 intron SP2637 - chr2R_5_18650001 chr2R_18650001 RAL-426 1069 chr2R 18715378 18715391 chr2R 18715734 18715769 6 369 10.0 12.5 11.2 0.5 391 chr2R 18715378 intergenic not near genes chr2R 18715574 intergenic not near genes chr2R 18715769 intergenic not near genes chr2R_6_18715001 chr2R_18715001 RAL-426 1070 chr2R 18738196 18738231 chr2R 18738292 18738325 5 96 3.5 4.0 3.8 1.0 129 chr2R 18738196 intron Hs3st-A + chr2R 18738260 intron Hs3st-A + chr2R 18738325 intron Hs3st-A + chr2R_5_18735001 chr2R_18735001 RAL-426 1071 chr2R 18769632 18769742 chr2R 18769890 18769946 9 224 6.0 6.5 6.2 1.2 314 chr2R 18769632 intron Mctp + chr2R 18769789 intron Mctp + chr2R 18769946 intron Mctp + chr2R_9_18765001 chr2R_18765001 RAL-426 1072 chr2R 18819055 18819068 chr2R 18819151 18819165 4 97 3.0 5.5 4.2 0.8 110 chr2R 18819055 intergenic Phb2 + chr2R 18819110 intergenic Phb2 + chr2R 18819165 intergenic Phb2 + chr2R_4_18815001 chr2R_18815001 RAL-426 1073 chr2R 18862292 18862406 chr2R 18862399 18862511 5 110 0.0 0.0 0.0 5.0 219 chr2R 18862292 intergenic Jheh3 - chr2R 18862402 intergenic Jheh3 -,CG43069 + chr2R 18862511 intergenic CG43069 +,Jheh3 - chr2R_5_18860001 chr2R_18860001 RAL-426 1074 chr2R 18871626 18871664 chr2R 18871731 18871769 13 103 16.5 6.5 11.5 1.0 143 chr2R 18871626 intergenic not near genes chr2R 18871698 intergenic not near genes chr2R 18871769 intergenic not near genes chr2R_13_18870001 chr2R_18870001 RAL-426 1075 chr2R 18877378 18877419 chr2R 18877584 18877624 6 205 8.5 7.0 7.8 0.7 246 chr2R 18877378 intergenic not near genes chr2R 18877501 intergenic not near genes chr2R 18877624 intergenic not near genes chr2R_6_18875001 chr2R_18875001 RAL-426 1076 chr2R 18888189 18888229 chr2R 18888388 18888432 9 200 20.5 15.0 17.8 0.5 243 chr2R 18888189 intron sano + chr2R 18888310 intron sano + chr2R 18888432 intron sano + chr2R_9_18885001 chr2R_18885001 RAL-426 1077 chr2R 18926486 18926522 chr2R 18926592 18926629 7 107 2.0 1.0 1.5 2.8 143 chr2R 18926486 intron sano + chr2R 18926558 intron sano + chr2R 18926629 intron sano + chr2R_7_18925001 chr2R_18925001 RAL-426 1078 chr2R 18930434 18930483 chr2R 18930547 18930580 6 108 3.5 5.5 4.5 1.1 146 chr2R 18930434 intron sano + chr2R 18930507 intron sano + chr2R 18930580 intron sano + chr2R_6_18930001 chr2R_18930001 RAL-426 1079 chr2R 18938493 18938534 chr2R 18938591 18938627 8 99 8.0 7.5 7.8 0.9 134 chr2R 18938493 intron sano + chr2R 18938560 intron sano + chr2R 18938627 intron sano + chr2R_8_18935001 chr2R_18935001 RAL-426 1080 chr2R 18964898 18964947 chr2R 18964993 18965043 4 96 6.5 8.5 7.5 0.5 145 chr2R 18964898 intergenic not near genes chr2R 18964970 intergenic not near genes chr2R 18965043 intergenic not near genes chr2R_4_18960001 chr2R_18960001 RAL-426 1081 chr2R 19026042 19026061 chr2R 19026188 19026207 5 146 9.0 3.5 6.2 0.7 165 chr2R 19026042 intron 5-HT1B - chr2R 19026124 intron 5-HT1B - chr2R 19026207 intron 5-HT1B - chr2R_5_19025001 chr2R_19025001 RAL-426 1082 chr2R 19234825 19234850 chr2R 19234927 19234952 5 101 8.5 10.5 9.5 0.5 127 chr2R 19234825 intron cora + chr2R 19234888 intron cora + chr2R 19234952 intron cora + chr2R_5_19230001 chr2R_19230001 RAL-426 1083 chr2R 19251348 19251365 chr2R 19251455 19251481 5 115 15.0 17.0 16.0 0.3 133 chr2R 19251348 exon CG33454 - chr2R 19251414 exon CG33454 - chr2R 19251481 exon CG33454 - chr2R_5_19250001 chr2R_19250001 RAL-426 1084 chr2R 19284424 19284464 chr2R 19284517 19284547 9 93 12.5 9.0 10.8 0.8 123 chr2R 19284424 intergenic CG10476 -,CG11906 - chr2R 19284486 intergenic CG10476 - chr2R 19284547 intergenic CG10476 - chr2R_9_19280001 chr2R_19280001 RAL-426 1085 chr2R 19295703 19295729 chr2R 19295804 19295815 5 96 6.0 11.5 8.8 0.5 112 chr2R 19295703 intron Tab2 + chr2R 19295759 intron Tab2 + chr2R 19295815 intron Tab2 + chr2R_5_19295001 chr2R_19295001 RAL-426 1086 chr2R 19354661 19354666 chr2R 19354864 19354876 4 210 8.0 14.5 11.2 0.3 215 chr2R 19354661 intron Rgk1 - chr2R 19354768 intron Rgk1 - chr2R 19354876 intron Rgk1 - chr2R_4_19350001 chr2R_19350001 RAL-426 1087 chr2R 19359021 19359066 chr2R 19359121 19359168 5 102 2.5 4.5 3.5 1.1 147 chr2R 19359021 intron CG11961 + chr2R 19359094 intron CG11961 + chr2R 19359168 intron CG11961 + chr2R_5_19355001 chr2R_19355001 RAL-426 1088 chr2R 19384866 19384938 chr2R 19384961 19385044 9 97 2.5 2.5 2.5 2.6 178 chr2R 19384866 exon CG10073 + chr2R 19384955 3` UTR CG10073 + chr2R 19385044 intergenic CG10073 + chr2R_9_19380001 chr2R_19380001 RAL-426 1089 chr2R 19504335 19504382 chr2R 19504440 19504487 10 101 8.5 8.5 8.5 1.1 152 chr2R 19504335 3` UTR CG11007 + chr2R 19504411 3` UTR CG11007 + chr2R 19504487 3` UTR CG11007 + chr2R_10_19500001 chr2R_19500001 RAL-426 1090 chr2R 19536466 19536500 chr2R 19536548 19536602 8 98 9.0 10.0 9.5 0.8 136 chr2R 19536466 intron sm - chr2R 19536534 intron sm - chr2R 19536602 intron sm - chr2R_8_19535001 chr2R_19535001 RAL-426 1091 chr2R 19559157 19559205 chr2R 19559302 19559335 9 135 10.5 13.0 11.8 0.7 178 chr2R 19559157 intron sm - chr2R 19559246 intron sm - chr2R 19559335 intron sm - chr2R_9_19555001 chr2R_19555001 RAL-426 1092 chr2R 19588730 19588782 chr2R 19588828 19588880 13 97 1.5 2.5 2.0 4.3 150 chr2R 19588730 intron sm - chr2R 19588805 intron sm - chr2R 19588880 intron sm - chr2R_13_19585001 chr2R_19585001 RAL-426 1093 chr2R 19603949 19604002 chr2R 19604058 19604106 7 108 1.0 2.5 1.8 2.5 157 chr2R 19603949 intron sm - chr2R 19604028 intron sm - chr2R 19604106 intron sm - chr2R_7_19600001 chr2R_19600001 RAL-426 1094 chr2R 19698569 19698578 chr2R 19698674 19698682 4 104 9.5 9.5 9.5 0.4 113 chr2R 19698569 intergenic Obp56a +,Obp56b - chr2R 19698626 intergenic Obp56b -,Obp56a + chr2R 19698682 intergenic Obp56b -,Obp56a + chr2R_4_19695001 chr2R_19695001 RAL-426 1095 chr2R 19698580 19698618 chr2R 19698673 19698724 5 97 8.5 9.5 9.0 0.5 144 chr2R 19698580 intergenic Obp56a +,Obp56b - chr2R 19698652 intergenic Obp56b -,Obp56a + chr2R 19698724 3` UTR Obp56b - chr2R_5_19695001 chr2R_19695001 RAL-426 1096 chr2R 19714692 19714709 chr2R 19714788 19714805 4 96 5.0 10.5 7.8 0.5 113 chr2R 19714692 3` UTR CG8517 + chr2R 19714748 3` UTR CG8517 + chr2R 19714805 3` UTR CG8517 + chr2R_4_19710001 chr2R_19710001 RAL-426 1097 chr2R 19715815 19715854 chr2R 19723324 19723361 blood 5 7504 7.5 6.5 7.0 0.6 7546 chr2R 19715815 intergenic not near genes chr2R 19719588 intergenic not near genes chr2R 19723361 intergenic not near genes chr2R_5_19715001 chr2R_19715001 RAL-426 1098 chr2R 19776578 19776623 chr2R 19779921 19779966 jockey 8 3342 0.5 5.0 2.8 2.1 3388 chr2R 19776578 intergenic not near genes chr2R 19778272 intergenic not near genes chr2R 19779966 intergenic not near genes chr2R_8_19775001 chr2R_19775001 RAL-426 1099 chr2R 19845063 19845111 chr2R 19845164 19845171 11 92 13.0 12.0 12.5 0.8 108 chr2R 19845063 intergenic not near genes chr2R 19845117 intergenic not near genes chr2R 19845171 intergenic not near genes chr2R_11_19845001 chr2R_19845001 RAL-426 1100 chr2R 19914841 19914877 chr2R 19922273 19922309 mdg1 7 7430 1.0 3.5 2.2 2.2 7468 chr2R 19914841 intergenic not near genes chr2R 19918575 intergenic not near genes chr2R 19922309 intergenic not near genes chr2R_7_19915001 chr2R_19915001 RAL-426 1101 chr2R 19923670 19923719 chr2R 19923785 19923814 8 109 10.5 15.5 13.0 0.6 144 chr2R 19923670 intergenic not near genes chr2R 19923742 intergenic not near genes chr2R 19923814 intergenic not near genes chr2R_8_19920001 chr2R_19920001 RAL-426 1102 chr2R 19957409 19957457 chr2R 19962631 19962653 copia 7 5216 8.0 3.0 5.5 1.1 5244 chr2R 19957409 intergenic CG44623 + chr2R 19960031 intergenic not near genes chr2R 19962653 intergenic not near genes chr2R_7_19960001 chr2R_19960001 RAL-426 1103 chr2R 19987821 19987838 chr2R 19987923 19987940 4 102 7.0 11.0 9.0 0.4 119 chr2R 19987821 intergenic not near genes chr2R 19987880 intergenic not near genes chr2R 19987940 intergenic not near genes chr2R_4_19985001 chr2R_19985001 RAL-426 1104 chr2R 20006232 20006279 chr2R 20006326 20006378 4 98 11.5 16.5 14.0 0.3 146 chr2R 20006232 intergenic not near genes chr2R 20006305 intergenic not near genes chr2R 20006378 intergenic not near genes chr2R_4_20005001 chr2R_20005001 RAL-426 1105 chr2R 20065619 20065654 chr2R 20065713 20065762 6 106 9.5 7.0 8.2 0.7 143 chr2R 20065619 intergenic not near genes chr2R 20065690 intergenic not near genes chr2R 20065762 intergenic not near genes chr2R_6_20065001 chr2R_20065001 RAL-426 1106 chr2R 20125731 20125746 chr2R 20125827 20125842 5 96 4.5 9.0 6.8 0.6 111 chr2R 20125731 intergenic not near genes chr2R 20125786 intergenic not near genes chr2R 20125842 intergenic not near genes chr2R_5_20125001 chr2R_20125001 RAL-426 1107 chr2R 20178309 20178327 chr2R 20178414 20178420 5 107 11.5 8.5 10.0 0.5 111 chr2R 20178309 intergenic not near genes chr2R 20178364 intergenic not near genes chr2R 20178420 intergenic not near genes chr2R_5_20175001 chr2R_20175001 RAL-426 1108 chr2R 20199210 20199244 chr2R 20199307 20199340 4 95 9.0 9.0 9.0 0.4 130 chr2R 20199210 intergenic not near genes chr2R 20199275 intergenic not near genes chr2R 20199340 intergenic not near genes chr2R_4_20195001 chr2R_20195001 RAL-426 1109 chr2R 20219875 20219898 chr2R 20219979 20220002 6 104 4.5 6.0 5.2 1.0 127 chr2R 20219875 intergenic not near genes chr2R 20219938 intergenic not near genes chr2R 20220002 intergenic not near genes chr2R_6_20215001 chr2R_20215001 RAL-426 1110 chr2R 20227666 20227705 chr2R 20227776 20227814 7 108 11.5 13.0 12.2 0.5 148 chr2R 20227666 intergenic not near genes chr2R 20227740 intergenic not near genes chr2R 20227814 intergenic not near genes chr2R_7_20225001 chr2R_20225001 RAL-426 1111 chr2R 20280813 20280857 chr2R 20281046 20281079 5 224 22.0 26.5 24.2 0.2 266 chr2R 20280813 intron CG9090 - chr2R 20280946 intron CG9090 - chr2R 20281079 5` UTR CG9090 - chr2R_5_20280001 chr2R_20280001 RAL-426 1112 chr2R 20321209 20321263 chr2R 20321318 20321345 7 103 14.0 15.0 14.5 0.5 136 chr2R 20321209 intron CG8920 + chr2R 20321277 intron CG8920 + chr2R 20321345 intron CG8920 + chr2R_7_20320001 chr2R_20320001 RAL-426 1113 chr2R 20326742 20326777 chr2R 20326839 20326862 4 94 18.0 16.0 17.0 0.2 120 chr2R 20326742 5` UTR MED8 - chr2R 20326802 5` UTR MED8 - chr2R 20326862 intergenic MED8 -,CG8929 + chr2R_4_20325001 chr2R_20325001 RAL-426 1114 chr2R 20336328 20336346 chr2R 20336442 20336460 6 113 13.0 6.5 9.8 0.6 132 chr2R 20336328 intergenic not near genes chr2R 20336394 intergenic not near genes chr2R 20336460 intergenic not near genes chr2R_6_20335001 chr2R_20335001 RAL-426 1115 chr2R 20336355 20336367 chr2R 20336430 20336481 4 98 11.0 7.0 9.0 0.4 126 chr2R 20336355 intergenic not near genes chr2R 20336418 intergenic not near genes chr2R 20336481 intergenic not near genes chr2R_4_20335001 chr2R_20335001 RAL-426 1116 chr2R 20338745 20338761 chr2R 20338845 20338860 4 100 7.5 5.0 6.2 0.6 115 chr2R 20338745 intergenic not near genes chr2R 20338802 intergenic not near genes chr2R 20338860 intergenic not near genes chr2R_4_20335001 chr2R_20335001 RAL-426 1117 chr2R 20456934 20456975 chr2R 20457047 20457088 13 110 4.5 7.5 6.0 1.9 154 chr2R 20456934 intron CG12484 + chr2R 20457011 intron CG12484 + chr2R 20457088 intron CG12484 + chr2R_13_20455001 chr2R_20455001 RAL-426 1118 chr2R 20498896 20498931 chr2R 20498994 20499035 8 103 8.0 7.0 7.5 0.9 139 chr2R 20498896 intergenic not near genes chr2R 20498966 intergenic not near genes chr2R 20499035 intergenic not near genes chr2R_8_20495001 chr2R_20495001 RAL-426 1119 chr2R 20506783 20506833 chr2R 20506893 20506939 5 109 8.0 4.5 6.2 0.7 156 chr2R 20506783 5` UTR CR44645 + chr2R 20506861 5` UTR CR44645 + chr2R 20506939 intergenic CR44645 + chr2R_5_20505001 chr2R_20505001 RAL-426 1120 chr2R 20572561 20572581 chr2R 20572671 20572689 9 109 4.5 4.5 4.5 1.6 128 chr2R 20572561 intron qsm - chr2R 20572625 intron qsm - chr2R 20572689 intron qsm - chr2R_9_20570001 chr2R_20570001 RAL-426 1121 chr2R 20590646 20590657 chr2R 20590745 20590756 4 99 11.0 12.0 11.5 0.3 110 chr2R 20590646 intron bl + chr2R 20590701 intron bl + chr2R 20590756 intron bl + chr2R_4_20590001 chr2R_20590001 RAL-426 1122 chr2R 20601702 20601742 chr2R 20601807 20601847 6 104 14.0 13.0 13.5 0.4 145 chr2R 20601702 intron bl + chr2R 20601774 intron bl + chr2R 20601847 intron bl + chr2R_6_20600001 chr2R_20600001 RAL-426 1123 chr2R 20668475 20668501 chr2R 20668552 20668587 5 87 7.5 10.0 8.8 0.5 112 chr2R 20668475 intron exu - chr2R 20668531 intron exu - chr2R 20668587 3` UTR exu - chr2R_5_20665001 chr2R_20665001 RAL-426 1124 chr2R 20702677 20702688 chr2R 20702753 20702775 4 87 10.0 11.0 10.5 0.3 98 chr2R 20702677 intron dpr + chr2R 20702726 intron dpr + chr2R 20702775 intron dpr + chr2R_4_20700001 chr2R_20700001 RAL-426 1125 chr2R 20739431 20739474 chr2R 20744209 20744247 F-element 12 4778 5.0 6.5 5.8 1.8 4816 chr2R 20739431 intron dpr + chr2R 20741839 intron dpr + chr2R 20744247 intron dpr + chr2R_12_20740001 chr2R_20740001 RAL-426 1126 chr2R 20783299 20783332 chr2R 20788088 20788124 F-element 5 4790 2.0 7.5 4.8 0.9 4825 chr2R 20783299 intergenic not near genes chr2R 20785712 intergenic not near genes chr2R 20788124 intergenic CG43666 - chr2R_5_20785001 chr2R_20785001 RAL-426 1127 chr2R 20834806 20834827 chr2R 20834941 20834959 7 134 8.0 10.5 9.2 0.7 153 chr2R 20834806 intron,intron insc -,sktl - chr2R 20834882 intron,intron insc -,sktl - chr2R 20834959 intron,intron insc -,sktl - chr2R_7_20830001 chr2R_20830001 RAL-426 1128 chr2R 20862317 20862348 chr2R 20862430 20862462 6 107 7.5 12.5 10.0 0.5 145 chr2R 20862317 intergenic not near genes chr2R 20862390 intergenic not near genes chr2R 20862462 intergenic not near genes chr2R_6_20860001 chr2R_20860001 RAL-426 1129 chr2R 20863106 20863139 chr2R 20863205 20863225 11 101 5.5 3.0 4.2 2.1 119 chr2R 20863106 intergenic not near genes chr2R 20863166 intergenic not near genes chr2R 20863225 intergenic not near genes chr2R_11_20860001 chr2R_20860001 RAL-426 1130 chr2R 20895564 20895595 chr2R 20895657 20895698 6 101 15.5 15.0 15.2 0.4 134 chr2R 20895564 intron otp - chr2R 20895631 intron otp - chr2R 20895698 intron otp - chr2R_6_20895001 chr2R_20895001 RAL-426 1131 chr2R 21075660 21075709 chr2R 21075767 21075816 6 106 13.0 10.0 11.5 0.5 156 chr2R 21075660 intron Treh + chr2R 21075738 intron Treh + chr2R 21075816 intron Treh + chr2R_6_21075001 chr2R_21075001 RAL-426 1132 chr2R 21110773 21110822 chr2R 21110884 21110886 9 102 10.5 11.0 10.8 0.8 113 chr2R 21110773 intron ktub + chr2R 21110830 intron ktub + chr2R 21110886 intron ktub + chr2R_9_21110001 chr2R_21110001 RAL-426 1133 chr2R 21113471 21113477 chr2R 21113579 21113586 4 109 10.0 6.5 8.2 0.4 115 chr2R 21113471 intron ktub + chr2R 21113528 intron ktub + chr2R 21113586 intron ktub + chr2R_4_21110001 chr2R_21110001 RAL-426 1134 chr2R 21136881 21136918 chr2R 21136984 21137020 7 103 7.0 6.5 6.8 0.9 139 chr2R 21136881 intron Magi - chr2R 21136950 intron Magi - chr2R 21137020 intron Magi - chr2R_7_21135001 chr2R_21135001 RAL-426 1135 chr2R 21151109 21151142 chr2R 21153762 21153795 opus 5 2653 1.5 5.5 3.5 1.1 2686 chr2R 21151109 intron CG30389 - chr2R 21152452 intron CG30389 - chr2R 21153795 intron CG30389 - chr2R_5_21150001 chr2R_21150001 RAL-426 1136 chr2R 21285415 21285435 chr2R 21285512 21285528 4 96 5.0 3.5 4.2 0.8 113 chr2R 21285415 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285472 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285528 3` UTR,3` UTR MFS16 +,CG10505 - chr2R_4_21285001 chr2R_21285001 RAL-426 1137 chr2R 21323726 21323736 chr2R 21323793 21323812 6 90 15.0 14.5 14.8 0.4 86 chr2R 21323726 intron dom + chr2R 21323769 intron dom + chr2R 21323812 intron dom + chr2R_6_21320001 chr2R_21320001 RAL-426 1138 chr2R 21363117 21363185 chr2R 21363235 21363294 8 113 3.5 6.0 4.8 1.4 177 chr2R 21363117 intron cv-2 - chr2R 21363206 intron cv-2 - chr2R 21363294 intron cv-2 - chr2R_8_21360001 chr2R_21360001 RAL-426 1139 chr2R 21370833 21370854 chr2R 21371020 21371037 4 185 3.5 5.5 4.5 0.7 204 chr2R 21370833 intron cv-2 - chr2R 21370935 intron cv-2 - chr2R 21371037 intron cv-2 - chr2R_4_21370001 chr2R_21370001 RAL-426 1140 chr2R 21408351 21408399 chr2R 21408463 21408511 6 109 6.0 0.5 3.2 1.4 160 chr2R 21408351 intron Sdc - chr2R 21408431 intron Sdc - chr2R 21408511 intron Sdc - chr2R_6_21405001 chr2R_21405001 RAL-426 1141 chr2R 21417257 21417265 chr2R 21417378 21417386 5 121 5.5 0.0 2.8 1.3 129 chr2R 21417257 intron Sdc - chr2R 21417322 intron Sdc - chr2R 21417386 intron Sdc - chr2R_5_21415001 chr2R_21415001 RAL-426 1142 chr2R 21421325 21421351 chr2R 21421424 21421445 4 94 7.5 14.5 11.0 0.3 120 chr2R 21421325 intron Sdc - chr2R 21421385 intron Sdc - chr2R 21421445 intron Sdc - chr2R_4_21420001 chr2R_21420001 RAL-426 1143 chr2R 21452949 21453001 chr2R 21453123 21453175 8 174 1.5 5.0 3.2 1.9 226 chr2R 21452949 intron Sdc - chr2R 21453062 intron Sdc - chr2R 21453175 intron Sdc - chr2R_8_21450001 chr2R_21450001 RAL-426 1144 chr2R 21457017 21457024 chr2R 21457129 21457136 4 111 6.0 13.0 9.5 0.4 119 chr2R 21457017 intron Sdc - chr2R 21457076 intron Sdc - chr2R 21457136 intron Sdc - chr2R_4_21455001 chr2R_21455001 RAL-426 1145 chr2R 21505745 21505794 chr2R 21505846 21505871 7 93 12.0 12.5 12.2 0.5 126 chr2R 21505745 intron MESK2 + chr2R 21505808 intron MESK2 + chr2R 21505871 intron MESK2 + chr2R_7_21505001 chr2R_21505001 RAL-426 1146 chr2R 21508052 21508090 chr2R 21508153 21508191 7 100 13.0 14.0 13.5 0.5 139 chr2R 21508052 intron MESK2 + chr2R 21508122 intron MESK2 + chr2R 21508191 intron MESK2 + chr2R_7_21505001 chr2R_21505001 RAL-426 1147 chr2R 21710922 21710965 chr2R 21711037 21711082 11 115 11.0 9.0 10.0 1.0 160 chr2R 21710922 intron,intron HmgD +,CG30403 - chr2R 21711002 intron,intron HmgD +,CG30403 - chr2R 21711082 intron,intron HmgD +,CG30403 - chr2R_11_21710001 chr2R_21710001 RAL-426 1148 chr2R 21721591 21721611 chr2R 21721668 21721718 5 100 12.0 13.0 12.5 0.4 127 chr2R 21721591 intron LBR + chr2R 21721654 intron LBR + chr2R 21721718 intron LBR + chr2R_5_21720001 chr2R_21720001 RAL-426 1149 chr2R 21732160 21732167 chr2R 21732260 21732272 5 104 7.5 11.0 9.2 0.5 112 chr2R 21732160 intergenic not near genes chr2R 21732216 intergenic not near genes chr2R 21732272 intergenic not near genes chr2R_5_21730001 chr2R_21730001 RAL-426 1150 chr2R 21738275 21738310 chr2R 21747437 21747477 roo 6 9156 1.5 5.5 3.5 1.3 9202 chr2R 21738275 intergenic not near genes chr2R 21742876 intergenic not near genes chr2R 21747477 intergenic not near genes chr2R_6_21740001 chr2R_21740001 RAL-426 1151 chr2R 21753064 21753115 chr2R 21753567 21753618 roo 19 503 2.5 6.0 4.2 3.7 554 chr2R 21753064 intergenic not near genes chr2R 21753341 intergenic not near genes chr2R 21753618 intergenic not near genes chr2R_19_21750001 chr2R_21750001 RAL-426 1152 chr2R 21759552 21759592 chr2R 21759658 21759699 7 100 10.0 10.5 10.2 0.6 147 chr2R 21759552 intergenic not near genes chr2R 21759626 intergenic not near genes chr2R 21759699 intergenic not near genes chr2R_7_21755001 chr2R_21755001 RAL-426 1153 chr2R 21775459 21775468 chr2R 21775842 21775845 4 381 14.0 13.0 13.5 0.3 386 chr2R 21775459 intergenic not near genes chr2R 21775652 intergenic not near genes chr2R 21775845 intergenic not near genes chr2R_4_21775001 chr2R_21775001 RAL-426 1154 chr2R 21809507 21809546 chr2R 21817766 21817806 roo 7 8259 6.0 3.5 4.8 1.2 8299 chr2R 21809507 intergenic not near genes chr2R 21813656 intergenic not near genes chr2R 21817806 intergenic not near genes chr2R_7_21810001 chr2R_21810001 RAL-426 1155 chr2R 21818864 21818895 chr2R 21818965 21818997 6 100 14.5 11.0 12.8 0.4 133 chr2R 21818864 intergenic not near genes chr2R 21818930 intergenic not near genes chr2R 21818997 intergenic not near genes chr2R_6_21815001 chr2R_21815001 RAL-426 1156 chr2R 21857340 21857371 chr2R 21857451 21857452 8 107 8.5 8.5 8.5 0.8 112 chr2R 21857340 intergenic not near genes chr2R 21857396 intergenic not near genes chr2R 21857452 intergenic not near genes chr2R_8_21855001 chr2R_21855001 RAL-426 1157 chr2R 21886111 21886138 chr2R 21886210 21886225 4 89 22.0 14.5 18.2 0.2 114 chr2R 21886111 intron Fili + chr2R 21886168 intron Fili + chr2R 21886225 intron Fili + chr2R_4_21885001 chr2R_21885001 RAL-426 1158 chr2R 21888300 21888322 chr2R 21888411 21888418 5 108 3.0 4.5 3.8 1.0 118 chr2R 21888300 intron Fili + chr2R 21888359 intron Fili + chr2R 21888418 intron Fili + chr2R_5_21885001 chr2R_21885001 RAL-426 1159 chr2R 21906253 21906294 chr2R 21906374 21906415 13 121 3.5 4.5 4.0 2.6 162 chr2R 21906253 intron Fili + chr2R 21906334 intron Fili + chr2R 21906415 intron Fili + chr2R_13_21905001 chr2R_21905001 RAL-426 1160 chr2R 21919825 21919867 chr2R 21919975 21920018 10 144 11.5 6.0 8.8 1.0 193 chr2R 21919825 intron Fili + chr2R 21919922 intron Fili + chr2R 21920018 intron Fili + chr2R_10_21915001 chr2R_21915001 RAL-426 1161 chr2R 21922580 21922618 chr2R 21922677 21922714 6 87 9.5 11.5 10.5 0.5 134 chr2R 21922580 intron Fili + chr2R 21922647 intron Fili + chr2R 21922714 intron Fili + chr2R_6_21920001 chr2R_21920001 RAL-426 1162 chr2R 21946757 21946801 chr2R 21946870 21946916 7 114 7.5 7.5 7.5 0.8 159 chr2R 21946757 intergenic Fili + chr2R 21946836 intergenic not near genes chr2R 21946916 intergenic not near genes chr2R_7_21945001 chr2R_21945001 RAL-426 1163 chr2R 22003075 22003114 chr2R 22003181 22003181 4 92 11.5 15.0 13.2 0.3 106 chr2R 22003075 intron CG34370 - chr2R 22003128 intron CG34370 - chr2R 22003181 intron CG34370 - chr2R_4_22000001 chr2R_22000001 RAL-426 1164 chr2R 22072686 22072716 chr2R 22072785 22072794 6 98 4.5 8.0 6.2 0.8 108 chr2R 22072686 intron CG11474 - chr2R 22072740 intron CG11474 - chr2R 22072794 intron CG11474 - chr2R_6_22070001 chr2R_22070001 RAL-426 1165 chr2R 22095573 22095612 chr2R 22095671 22095712 4 99 12.5 9.5 11.0 0.3 139 chr2R 22095573 intron CG11073 - chr2R 22095642 intron CG11073 - chr2R 22095712 intron CG11073 - chr2R_4_22095001 chr2R_22095001 RAL-426 1166 chr2R 22124307 22124330 chr2R 22124416 22124439 5 109 8.5 9.5 9.0 0.5 132 chr2R 22124307 3` UTR mei-S332 + chr2R 22124373 intergenic mei-S332 +,GM130 - chr2R 22124439 intergenic mei-S332 +,GM130 - chr2R_5_22120001 chr2R_22120001 RAL-426 1167 chr2R 22132272 22132283 chr2R 22132372 22132380 5 98 6.0 4.5 5.2 0.8 108 chr2R 22132272 intergenic not near genes chr2R 22132326 intergenic not near genes chr2R 22132380 intergenic not near genes chr2R_5_22130001 chr2R_22130001 RAL-426 1168 chr2R 22178726 22178772 chr2R 22178832 22178878 12 105 5.5 9.5 7.5 1.4 152 chr2R 22178726 intron CG11170 - chr2R 22178802 intron CG11170 - chr2R 22178878 intron CG11170 - chr2R_12_22175001 chr2R_22175001 RAL-426 1169 chr2R 22185668 22185692 chr2R 22185787 22185810 7 119 3.0 2.0 2.5 2.0 142 chr2R 22185668 3` UTR MED16 + chr2R 22185739 3` UTR MED16 + chr2R 22185810 3` UTR MED16 + chr2R_7_22185001 chr2R_22185001 RAL-426 1170 chr2R 22225385 22225399 chr2R 22225859 22225859 5 470 9.5 10.5 10.0 0.5 474 chr2R 22225385 exon Oatp58Dc - chr2R 22225622 intron Oatp58Dc - chr2R 22225859 intron Oatp58Dc - chr2R_5_22225001 chr2R_22225001 RAL-426 1171 chr2R 22248843 22248862 chr2R 22248923 22248933 5 82 5.5 3.5 4.5 0.9 90 chr2R 22248843 intron dve + chr2R 22248888 intron dve + chr2R 22248933 intron dve + chr2R_5_22245001 chr2R_22245001 RAL-426 1172 chr2R 22258513 22258531 chr2R 22258663 22258680 4 150 7.5 11.0 9.2 0.4 167 chr2R 22258513 intron dve + chr2R 22258596 intron dve + chr2R 22258680 intron dve + chr2R_4_22255001 chr2R_22255001 RAL-426 1173 chr2R 22290070 22290089 chr2R 22290173 22290188 5 103 6.5 2.5 4.5 0.9 118 chr2R 22290070 intergenic not near genes chr2R 22290129 intergenic not near genes chr2R 22290188 intergenic not near genes chr2R_5_22290001 chr2R_22290001 RAL-426 1174 chr2R 22349674 22349688 chr2R 22351478 22351490 jockey 6 1801 9.5 5.0 7.2 0.7 1816 chr2R 22349674 intron Liprin-gamma - chr2R 22350582 intron Liprin-gamma - chr2R 22351490 intron Liprin-gamma - chr2R_6_22350001 chr2R_22350001 RAL-426 1175 chr2R 22349689 22349721 chr2R 22351474 22351491 jockey 13 1795 5.0 3.5 4.2 2.5 1802 chr2R 22349689 intron Liprin-gamma - chr2R 22350590 intron Liprin-gamma - chr2R 22351491 intron Liprin-gamma - chr2R_13_22350001 chr2R_22350001 RAL-426 1176 chr2R 22360367 22360379 chr2R 22360820 22360826 jockey 6 452 14.0 5.5 9.8 0.6 459 chr2R 22360367 intron Liprin-gamma - chr2R 22360596 intron Liprin-gamma - chr2R 22360826 intron Liprin-gamma - chr2R_6_22360001 chr2R_22360001 RAL-426 1177 chr2R 22465310 22465323 chr2R 22465516 22465535 BS 4 211 3.5 3.5 3.5 0.9 225 chr2R 22465310 intron CG10384 + chr2R 22465422 intron CG10384 + chr2R 22465535 intron CG10384 + chr2R_4_22465001 chr2R_22465001 RAL-426 1178 chr2R 22499854 22499879 chr2R 22499942 22499952 8 87 5.0 9.0 7.0 1.0 98 chr2R 22499854 intron px - chr2R 22499903 intron px - chr2R 22499952 intron px - chr2R_8_22495001 chr2R_22495001 RAL-426 1179 chr2R 22506699 22506727 chr2R 22506796 22506825 5 98 3.5 3.5 3.5 1.1 126 chr2R 22506699 intron px - chr2R 22506762 intron px - chr2R 22506825 intron px - chr2R_5_22505001 chr2R_22505001 RAL-426 1180 chr2R 22525744 22525759 chr2R 22529323 22529334 jockey 4 3575 4.0 7.0 5.5 0.6 3590 chr2R 22525744 intron px - chr2R 22527539 intron px - chr2R 22529334 intron px - chr2R_4_22525001 chr2R_22525001 RAL-426 1181 chr2R 22545598 22545647 chr2R 22545697 22545746 6 99 7.5 6.0 6.8 0.8 148 chr2R 22545598 intron px - chr2R 22545672 intron px - chr2R 22545746 intron px - chr2R_6_22545001 chr2R_22545001 RAL-426 1182 chr2R 22723212 22723263 chr2R 22723307 22723359 10 96 3.0 5.5 4.2 1.9 147 chr2R 22723212 intron jbug - chr2R 22723286 intron jbug - chr2R 22723359 intron jbug - chr2R_10_22720001 chr2R_22720001 RAL-426 1183 chr2R 22756613 22756646 chr2R 22756711 22756743 7 98 11.0 12.0 11.5 0.6 130 chr2R 22756613 intron,intron CG42260 -,CR30267 + chr2R 22756678 intron,intron CG42260 -,CR30267 + chr2R 22756743 intron,intron CG42260 -,CR30267 + chr2R_7_22755001 chr2R_22755001 RAL-426 1184 chr2R 22774959 22774965 chr2R 22775397 22775403 jockey 4 438 12.5 10.0 11.2 0.3 444 chr2R 22774959 intron CG42260 - chr2R 22775181 intron CG42260 - chr2R 22775403 intron CG42260 - chr2R_4_22775001 chr2R_22775001 RAL-426 1185 chr2R 22774966 22774996 chr2R 22775380 22775435 jockey 7 433 7.5 5.0 6.2 1.0 469 chr2R 22774966 intron CG42260 - chr2R 22775200 intron CG42260 - chr2R 22775435 intron CG42260 - chr2R_7_22775001 chr2R_22775001 RAL-426 1186 chr2R 22834772 22834801 chr2R 22834905 22834928 4 126 10.5 5.5 8.0 0.4 156 chr2R 22834772 intron CG12490 + chr2R 22834850 intron CG12490 + chr2R 22834928 intron CG12490 + chr2R_4_22830001 chr2R_22830001 RAL-426 1187 chr2R 22843013 22843050 chr2R 22844994 22845032 flea 4 1982 6.5 6.0 6.2 0.6 2019 chr2R 22843013 intergenic CG9826 + chr2R 22844022 intergenic not near genes chr2R 22845032 intergenic not near genes chr2R_4_22840001 chr2R_22840001 RAL-426 1188 chr2R 22941798 22941841 chr2R 22941897 22941938 5 98 3.5 2.0 2.8 1.3 140 chr2R 22941798 intergenic CG42694 + chr2R 22941868 intergenic CG42694 + chr2R 22941938 5` UTR CG42694 + chr2R_5_22940001 chr2R_22940001 RAL-426 1189 chr2R 22945038 22945081 chr2R 22945171 22945215 11 133 10.5 14.5 12.5 0.8 177 chr2R 22945038 exon CG42694 + chr2R 22945126 3` UTR CG42694 + chr2R 22945215 intergenic CG42694 + chr2R_11_22945001 chr2R_22945001 RAL-426 1190 chr2R 22951717 22951854 chr2R 22951867 22951960 4 160 2.0 2.5 2.2 1.2 243 chr2R 22951717 3` UTR CR32835 - chr2R 22951838 3` UTR CR32835 - chr2R 22951960 intron CR32835 - chr2R_4_22950001 chr2R_22950001 RAL-426 1191 chr2R 22955378 22955408 chr2R 22955486 22955516 6 108 22.0 18.0 20.0 0.3 138 chr2R 22955378 intergenic not near genes chr2R 22955447 intergenic not near genes chr2R 22955516 intergenic not near genes chr2R_6_22955001 chr2R_22955001 RAL-426 1192 chr2R 22968119 22968162 chr2R 22968228 22968270 5 108 17.0 14.5 15.8 0.3 151 chr2R 22968119 intergenic not near genes chr2R 22968194 intergenic not near genes chr2R 22968270 intergenic not near genes chr2R_5_22965001 chr2R_22965001 RAL-426 1193 chr2R 22978266 22978314 chr2R 22978364 22978413 10 97 1.5 5.5 3.5 2.2 147 chr2R 22978266 intergenic not near genes chr2R 22978340 intergenic not near genes chr2R 22978413 intergenic not near genes chr2R_10_22975001 chr2R_22975001 RAL-426 1194 chr2R 22991611 22991659 chr2R 22991723 22991766 15 109 4.0 3.0 3.5 3.3 155 chr2R 22991611 intron twi + chr2R 22991688 intron twi + chr2R 22991766 intron twi + chr2R_15_22990001 chr2R_22990001 RAL-426 1195 chr2R 23110775 23110777 chr2R 23110847 23110889 4 89 6.5 5.0 5.8 0.6 114 chr2R 23110775 3` UTR CR44781 - chr2R 23110832 3` UTR CR44781 - chr2R 23110889 3` UTR CR44781 - chr2R_4_23110001 chr2R_23110001 RAL-426 1196 chr2R 23186554 23186577 chr2R 23186651 23186666 4 96 14.0 12.0 13.0 0.3 112 chr2R 23186554 intron CG34371 - chr2R 23186610 intron CG34371 - chr2R 23186666 intron CG34371 - chr2R_4_23185001 chr2R_23185001 RAL-426 1197 chr2R 23186579 23186598 chr2R 23186650 23186696 6 89 13.0 12.0 12.5 0.4 117 chr2R 23186579 intron CG34371 - chr2R 23186638 intron CG34371 - chr2R 23186696 intron CG34371 - chr2R_6_23185001 chr2R_23185001 RAL-426 1198 chr2R 23188535 23188579 chr2R 23188633 23188677 5 97 6.0 4.0 5.0 0.8 142 chr2R 23188535 intron CG34371 - chr2R 23188606 intron CG34371 - chr2R 23188677 intron CG34371 - chr2R_5_23185001 chr2R_23185001 RAL-426 1199 chr2R 23190007 23190021 chr2R 23190104 23190121 4 99 8.0 0.0 4.0 0.8 114 chr2R 23190007 intron CG34371 - chr2R 23190064 intron CG34371 - chr2R 23190121 intron CG34371 - chr2R_4_23190001 chr2R_23190001 RAL-426 1200 chr2R 23351905 23351951 chr2R 23352011 23352025 8 94 5.5 11.5 8.5 0.8 120 chr2R 23351905 exon CG34210 + chr2R 23351965 exon CG34210 + chr2R 23352025 3` UTR CG34210 + chr2R_8_23350001 chr2R_23350001 RAL-426 1201 chr2R 23411037 23411079 chr2R 23411136 23411164 6 98 9.0 6.5 7.8 0.7 127 chr2R 23411037 intergenic not near genes chr2R 23411100 intergenic not near genes chr2R 23411164 intergenic not near genes chr2R_6_23410001 chr2R_23410001 RAL-426 1202 chr2R 23421064 23421113 chr2R 23421163 23421191 7 92 6.5 8.0 7.2 0.9 127 chr2R 23421064 intergenic CG9815 - chr2R 23421128 intergenic CG9815 - chr2R 23421191 intergenic CG9815 - chr2R_7_23420001 chr2R_23420001 RAL-426 1203 chr2R 23422637 23422659 chr2R 23422736 23422738 6 95 14.0 6.5 10.2 0.5 101 chr2R 23422637 intron CG9815 - chr2R 23422688 intron CG9815 - chr2R 23422738 intron CG9815 - chr2R_6_23420001 chr2R_23420001 RAL-426 1204 chr2R 23508904 23508943 chr2R 23509041 23509079 8 133 3.5 2.5 3.0 2.0 175 chr2R 23508904 intergenic not near genes chr2R 23508992 intergenic not near genes chr2R 23509079 intergenic not near genes chr2R_8_23505001 chr2R_23505001 RAL-426 1205 chr2R 23563872 23563920 chr2R 23563972 23564020 10 94 6.0 4.5 5.2 1.6 148 chr2R 23563872 3` UTR Pi3K59F + chr2R 23563946 3` UTR Pi3K59F + chr2R 23564020 3` UTR,5` UTR Pi3K59F +,CG30184 + chr2R_10_23560001 chr2R_23560001 RAL-426 1206 chr2R 23579995 23580017 chr2R 23580079 23580113 6 88 10.0 9.5 9.8 0.6 118 chr2R 23579995 intron apt + chr2R 23580054 intron apt + chr2R 23580113 intron apt + chr2R_6_23580001 chr2R_23580001 RAL-426 1207 chr2R 23595887 23595928 chr2R 23595982 23596024 5 96 11.0 8.0 9.5 0.5 137 chr2R 23595887 intron apt + chr2R 23595956 intron apt + chr2R 23596024 intron apt + chr2R_5_23595001 chr2R_23595001 RAL-426 1208 chr2R 23607042 23607185 chr2R 23607139 23607297 4 102 15.0 18.5 16.8 0.2 255 chr2R 23607042 intron CG17664 - chr2R 23607170 intron CG17664 - chr2R 23607297 intron CG17664 - chr2R_4_23605001 chr2R_23605001 RAL-426 1209 chr2R 23674166 23674210 chr2R 23674266 23674309 14 96 3.0 7.5 5.2 2.3 143 chr2R 23674166 intron Pde8 + chr2R 23674238 intron Pde8 + chr2R 23674309 exon Pde8 + chr2R_14_23670001 chr2R_23670001 RAL-426 1210 chr2R 23745406 23745435 chr2R 23745482 23745531 6 90 16.0 20.5 18.2 0.3 125 chr2R 23745406 intron egl - chr2R 23745468 intron egl - chr2R 23745531 intron egl - chr2R_6_23745001 chr2R_23745001 RAL-426 1211 chr2R 23758321 23758349 chr2R 23758403 23758424 5 87 5.0 7.5 6.2 0.7 103 chr2R 23758321 intron CG9850 - chr2R 23758372 intron CG9850 - chr2R 23758424 intron CG9850 - chr2R_5_23755001 chr2R_23755001 RAL-426 1212 chr2R 23914299 23914328 chr2R 23921943 23921966 412 10 7641 5.0 6.5 5.8 1.5 7667 chr2R 23914299 exon kcc + chr2R 23918132 intron kcc + chr2R 23921966 exon kcc + chr2R_10_23915001 chr2R_23915001 RAL-426 1213 chr2R 24008391 24008437 chr2R 24008495 24008543 8 96 14.5 10.0 12.2 0.6 152 chr2R 24008391 intron Unc-89 - chr2R 24008467 intron Unc-89 - chr2R 24008543 intron Unc-89 - chr2R_8_24005001 chr2R_24005001 RAL-426 1214 chr2R 24031363 24031411 chr2R 24031467 24031514 9 102 15.0 15.5 15.2 0.6 151 chr2R 24031363 5` UTR CG30172 - chr2R 24031438 intergenic CG30172 -,Chi - chr2R 24031514 intergenic Chi -,CG30172 - chr2R_9_24030001 chr2R_24030001 RAL-426 1215 chr2R 24077918 24077958 chr2R 24078007 24078054 9 90 14.0 14.0 14.0 0.6 136 chr2R 24077918 3` UTR Mlp60A + chr2R 24077986 3` UTR Mlp60A + chr2R 24078054 3` UTR Mlp60A + chr2R_9_24075001 chr2R_24075001 RAL-426 1216 chr2R 24177218 24177226 chr2R 24184723 24184730 412 6 7503 11.5 7.5 9.5 0.6 7512 chr2R 24177218 3` UTR Nop60B + chr2R 24180974 intron Nop60B + chr2R 24184730 3` UTR Nop60B + chr2R_6_24180001 chr2R_24180001 RAL-426 1217 chr2R 24177238 24177266 chr2R 24184721 24184766 412 9 7498 4.5 6.5 5.5 1.4 7528 chr2R 24177238 3` UTR Nop60B + chr2R 24181002 intron Nop60B + chr2R 24184766 3` UTR Nop60B + chr2R_9_24180001 chr2R_24180001 RAL-426 1218 chr2R 24278326 24278348 chr2R 24278430 24278446 4 100 3.5 10.5 7.0 0.5 120 chr2R 24278326 intron nvy + chr2R 24278386 intron nvy + chr2R 24278446 intron nvy + chr2R_4_24275001 chr2R_24275001 RAL-426 1219 chr2R 24290550 24290588 chr2R 24290652 24290691 8 102 11.0 10.0 10.5 0.7 141 chr2R 24290550 3` UTR nvy + chr2R 24290620 3` UTR nvy + chr2R 24290691 3` UTR nvy + chr2R_8_24290001 chr2R_24290001 RAL-426 1220 chr2R 24303871 24303904 chr2R 24303975 24303993 7 101 21.0 16.5 18.8 0.4 122 chr2R 24303871 intergenic not near genes chr2R 24303932 intergenic not near genes chr2R 24303993 intergenic not near genes chr2R_7_24300001 chr2R_24300001 RAL-426 1221 chr2R 24313381 24313401 chr2R 24313484 24313504 5 103 7.0 9.0 8.0 0.6 123 chr2R 24313381 intergenic betaTub60D + chr2R 24313442 intergenic betaTub60D + chr2R 24313504 intergenic betaTub60D + chr2R_5_24310001 chr2R_24310001 RAL-426 1222 chr2R 24320164 24320184 chr2R 24320283 24320305 4 120 9.5 8.0 8.8 0.4 141 chr2R 24320164 intergenic not near genes chr2R 24320234 intergenic not near genes chr2R 24320305 intergenic not near genes chr2R_4_24320001 chr2R_24320001 RAL-426 1223 chr2R 24326695 24326736 chr2R 24326816 24326855 5 120 11.5 16.5 14.0 0.3 160 chr2R 24326695 intron CR44810 + chr2R 24326775 intron CR44810 + chr2R 24326855 intron CR44810 + chr2R_5_24325001 chr2R_24325001 RAL-426 1224 chr2R 24353415 24353453 chr2R 24361793 24361827 roo 11 8380 5.5 6.0 5.8 1.6 8412 chr2R 24353415 intron,intron bs +,CR44811 - chr2R 24357621 intron,intron bs +,CR44811 - chr2R 24361827 intron,intron bs +,CR44811 - chr2R_11_24355001 chr2R_24355001 RAL-426 1225 chr2R 24383827 24383852 chr2R 24383910 24383953 7 94 10.5 8.5 9.5 0.7 126 chr2R 24383827 intron mAChR-A - chr2R 24383890 intron mAChR-A - chr2R 24383953 exon mAChR-A - chr2R_7_24380001 chr2R_24380001 RAL-426 1226 chr2R 24415298 24415310 chr2R 24415403 24415414 4 104 12.0 2.0 7.0 0.5 116 chr2R 24415298 intergenic CG45068 +,CG45069 +,prom - chr2R 24415356 intergenic prom -,CG45068 +,CG45069 + chr2R 24415414 3` UTR prom - chr2R_4_24415001 chr2R_24415001 RAL-426 1227 chr2R 24415313 24415349 chr2R 24415402 24415454 8 102 3.0 2.0 2.5 2.3 141 chr2R 24415313 intergenic CG45068 +,CG45069 +,prom - chr2R 24415384 intergenic prom -,CG45068 +,CG45069 + chr2R 24415454 3` UTR prom - chr2R_8_24415001 chr2R_24415001 RAL-426 1228 chr2R 24430700 24430948 chr2R 24430854 24431056 12 110 0.0 2.5 1.2 5.5 356 chr2R 24430700 intergenic CG15873 - chr2R 24430878 intergenic CG15873 -,Pgam5-2 - chr2R 24431056 intergenic Pgam5-2 -,CG15873 - chr2R_12_24430001 chr2R_24430001 RAL-426 1229 chr2R 24442664 24442709 chr2R 24442817 24442846 6 146 12.5 6.0 9.2 0.6 182 chr2R 24442664 intergenic not near genes chr2R 24442755 intergenic not near genes chr2R 24442846 intergenic not near genes chr2R_6_24440001 chr2R_24440001 RAL-426 1230 chr2R 24456044 24456093 chr2R 24456144 24456192 9 97 9.0 8.0 8.5 0.9 148 chr2R 24456044 intron CG13579 + chr2R 24456118 intron CG13579 + chr2R 24456192 intron CG13579 + chr2R_9_24455001 chr2R_24455001 RAL-426 1231 chr2R 24493066 24493089 chr2R 24493175 24493197 5 109 16.0 15.0 15.5 0.3 131 chr2R 24493066 intergenic CG13590 -,CG13589 - chr2R 24493132 intergenic CG13590 -,CG13589 - chr2R 24493197 intergenic CG13590 -,CG13589 - chr2R_5_24490001 chr2R_24490001 RAL-426 1232 chr2R 24590125 24590143 chr2R 24590203 24590243 9 90 3.0 4.5 3.8 1.9 118 chr2R 24590125 intron pio + chr2R 24590184 intron pio + chr2R 24590243 intron pio + chr2R_9_24590001 chr2R_24590001 RAL-426 1233 chr2R 24591496 24591543 chr2R 24591592 24591620 18 90 2.0 2.0 2.0 6.0 124 chr2R 24591496 intron pio + chr2R 24591558 intron pio + chr2R 24591620 intron pio + chr2R_18_24590001 chr2R_24590001 RAL-426 1234 chr2R 24647559 24647602 chr2R 24655150 24655179 412 6 7584 4.5 3.0 3.8 1.2 7620 chr2R 24647559 intergenic not near genes chr2R 24651369 intergenic not near genes chr2R 24655179 intergenic not near genes chr2R_6_24650001 chr2R_24650001 RAL-426 1235 chr2R 24647609 24647618 chr2R 24655148 24655195 412 7 7559 3.0 3.0 3.0 1.8 7586 chr2R 24647609 intergenic not near genes chr2R 24651402 intergenic not near genes chr2R 24655195 intergenic not near genes chr2R_7_24650001 chr2R_24650001 RAL-426 1236 chr2R 24859822 24859859 chr2R 24859927 24859935 6 95 9.0 9.5 9.2 0.6 113 chr2R 24859822 5` UTR CR44829 + chr2R 24859878 5` UTR CR44829 + chr2R 24859935 5` UTR CR44829 + chr2R_6_24855001 chr2R_24855001 RAL-426 1237 chr2R 24883866 24884076 chr2R 24883964 24884178 16 102 16.0 11.0 13.5 1.1 312 chr2R 24883866 intron NKAIN + chr2R 24884022 intron NKAIN + chr2R 24884178 intron NKAIN + chr2R_16_24880001 chr2R_24880001 RAL-426 1238 chr2R 25004876 25004920 chr2R 25004973 25005009 11 86 12.0 14.0 13.0 0.8 133 chr2R 25004876 intron zip - chr2R 25004942 intron zip - chr2R 25005009 intron zip - chr2R_11_25000001 chr2R_25000001 RAL-426 1239 chr2R 25014533 25014572 chr2R 25014622 25014668 16 90 1.0 2.0 1.5 6.4 135 chr2R 25014533 intron uzip + chr2R 25014600 intron uzip + chr2R 25014668 intron uzip + chr2R_16_25010001 chr2R_25010001 RAL-426 1240 chr2R 25018324 25018362 chr2R 25018445 25018483 6 114 15.5 11.0 13.2 0.4 159 chr2R 25018324 intron uzip + chr2R 25018404 intron uzip + chr2R 25018483 intron uzip + chr2R_6_25015001 chr2R_25015001 RAL-426 1241 chr2R 25022645 25022673 chr2R 25022749 25022775 6 103 10.0 9.0 9.5 0.6 130 chr2R 25022645 intron uzip + chr2R 25022710 intron uzip + chr2R 25022775 intron uzip + chr2R_6_25020001 chr2R_25020001 RAL-426 1242 chr2R 25101266 25101290 chr2R 25101388 25101412 12 121 6.5 6.5 6.5 1.6 146 chr2R 25101266 intron lov - chr2R 25101339 intron lov - chr2R 25101412 intron lov - chr2R_12_25100001 chr2R_25100001 RAL-426 1243 chr2R 25101294 25101307 chr2R 25101387 25101428 4 108 3.0 6.5 4.8 0.7 134 chr2R 25101294 intron lov - chr2R 25101361 intron lov - chr2R 25101428 intron lov - chr2R_4_25100001 chr2R_25100001 RAL-426 1244 chr2R 25122943 25122966 chr2R 25123042 25123058 8 96 11.0 12.0 11.5 0.6 115 chr2R 25122943 intron lov - chr2R 25123000 intron lov - chr2R 25123058 intron lov - chr2R_8_25120001 chr2R_25120001 RAL-426 1245 chr2R 25141635 25141680 chr2R 25159345 25159390 roo 15 17709 5.0 7.0 6.0 2.1 17755 chr2R 25141635 intergenic not near genes chr2R 25150512 intergenic not near genes chr2R 25159390 intergenic not near genes chr2R_15_25150001 chr2R_25150001 RAL-426 1246 chr2R 25180749 25180793 chr2R 25180845 25180890 8 97 1.0 2.5 1.8 2.9 141 chr2R 25180749 intergenic not near genes chr2R 25180820 intergenic not near genes chr2R 25180890 intergenic not near genes chr2R_8_25180001 chr2R_25180001 RAL-426 1247 chr3L 30838 30853 chr3L 30987 31002 4 149 7.5 3.5 5.5 0.6 164 chr3L 30838 intergenic not near genes chr3L 30920 intergenic not near genes chr3L 31002 intergenic not near genes chr3L_4_30001 chr3L_30001 RAL-426 1248 chr3L 30854 30889 chr3L 30985 30986 10 131 3.0 3.5 3.2 2.4 132 chr3L 30854 intergenic not near genes chr3L 30920 intergenic not near genes chr3L 30986 intergenic not near genes chr3L_10_30001 chr3L_30001 RAL-426 1249 chr3L 36407 36450 chr3L 36713 36754 5 306 0.0 3.5 1.8 1.8 347 chr3L 36407 intergenic not near genes chr3L 36580 intergenic not near genes chr3L 36754 intergenic not near genes chr3L_5_35001 chr3L_35001 RAL-426 1250 chr3L 41432 41446 chr3L 41606 41629 8 183 9.0 4.0 6.5 1.1 197 chr3L 41432 intergenic not near genes chr3L 41530 intergenic not near genes chr3L 41629 intergenic not near genes chr3L_8_40001 chr3L_40001 RAL-426 1251 chr3L 41452 41462 chr3L 41605 41652 7 177 4.0 4.0 4.0 1.4 200 chr3L 41452 intergenic not near genes chr3L 41552 intergenic not near genes chr3L 41652 intergenic not near genes chr3L_7_40001 chr3L_40001 RAL-426 1252 chr3L 68960 69013 chr3L 69067 69084 14 100 1.0 3.0 2.0 4.7 124 chr3L 68960 3` UTR Lsp1gamma + chr3L 69022 intergenic Lsp1gamma +,CR44510 + chr3L 69084 intergenic CR44510 +,Lsp1gamma + chr3L_14_65001 chr3L_65001 RAL-426 1253 chr3L 71911 71958 chr3L 72012 72061 9 98 3.0 6.5 4.8 1.6 150 chr3L 71911 intergenic CR43988 - chr3L 71986 intergenic CR43988 - chr3L 72061 intergenic CR43988 - chr3L_9_70001 chr3L_70001 RAL-426 1254 chr3L 110202 110220 chr3L 119384 119407 roo 6 9186 7.0 4.0 5.5 0.9 9205 chr3L 110202 intergenic not near genes chr3L 114804 intergenic not near genes chr3L 119407 intergenic not near genes chr3L_6_110001 chr3L_110001 RAL-426 1255 chr3L 110222 110232 chr3L 119377 119418 roo 7 9181 6.0 3.0 4.5 1.3 9196 chr3L 110222 intergenic not near genes chr3L 114820 intergenic not near genes chr3L 119418 intergenic not near genes chr3L_7_110001 chr3L_110001 RAL-426 1256 chr3L 376115 376152 chr3L 376214 376251 15 99 2.0 5.5 3.8 3.1 136 chr3L 376115 intron trh - chr3L 376183 intron trh - chr3L 376251 intron trh - chr3L_15_375001 chr3L_375001 RAL-426 1257 chr3L 402670 402718 chr3L 409743 409791 297 15 7067 4.5 5.0 4.8 2.6 7121 chr3L 402670 intergenic not near genes chr3L 406230 intergenic not near genes chr3L 409791 intergenic not near genes chr3L_15_405001 chr3L_405001 RAL-426 1258 chr3L 445557 445577 chr3L 445626 445650 4 84 2.0 0.5 1.2 1.8 93 chr3L 445557 exon klar - chr3L 445604 intron klar - chr3L 445650 intron klar - chr3L_4_445001 chr3L_445001 RAL-426 1259 chr3L 457023 457032 chr3L 457121 457130 5 98 4.5 2.0 3.2 1.2 107 chr3L 457023 intron klar - chr3L 457076 intron klar - chr3L 457130 intron klar - chr3L_5_455001 chr3L_455001 RAL-426 1260 chr3L 459957 459997 chr3L 460051 460094 10 94 3.5 4.0 3.8 2.1 137 chr3L 459957 intron klar - chr3L 460026 intron klar - chr3L 460094 intron klar - chr3L_10_460001 chr3L_460001 RAL-426 1261 chr3L 467440 467454 chr3L 467528 467550 4 94 0.0 4.5 2.2 1.2 110 chr3L 467440 intron klar - chr3L 467495 intron klar - chr3L 467550 intron klar - chr3L_4_465001 chr3L_465001 RAL-426 1262 chr3L 467457 467623 chr3L 467527 467720 15 91 3.5 4.5 4.0 3.0 263 chr3L 467457 intron klar - chr3L 467588 intron klar - chr3L 467720 intron klar - chr3L_15_465001 chr3L_465001 RAL-426 1263 chr3L 502763 502801 chr3L 502866 502903 8 102 4.0 4.0 4.0 1.6 140 chr3L 502763 intron klar - chr3L 502833 intron klar - chr3L 502903 intron klar - chr3L_8_500001 chr3L_500001 RAL-426 1264 chr3L 506389 506410 chr3L 506506 506526 12 117 2.5 1.5 2.0 4.0 137 chr3L 506389 intron klar - chr3L 506458 intron klar - chr3L 506526 intron klar - chr3L_12_505001 chr3L_505001 RAL-426 1265 chr3L 514258 514306 chr3L 514355 514380 17 94 3.5 5.5 4.5 3.1 122 chr3L 514258 intron klar - chr3L 514319 intron klar - chr3L 514380 intron klar - chr3L_17_510001 chr3L_510001 RAL-426 1266 chr3L 535030 535078 chr3L 535128 535180 16 101 4.0 3.0 3.5 3.6 150 chr3L 535030 intron klar - chr3L 535105 intron klar - chr3L 535180 intron klar - chr3L_16_535001 chr3L_535001 RAL-426 1267 chr3L 592945 592969 chr3L 593041 593065 5 96 1.0 3.5 2.2 1.6 120 chr3L 592945 intergenic MED14 + chr3L 593005 intergenic MED14 + chr3L 593065 intergenic MED14 + chr3L_5_590001 chr3L_590001 RAL-426 1268 chr3L 665861 665884 chr3L 665964 665986 10 103 5.5 6.5 6.0 1.4 125 chr3L 665861 intergenic not near genes chr3L 665924 intergenic not near genes chr3L 665986 intergenic not near genes chr3L_10_665001 chr3L_665001 RAL-426 1269 chr3L 695630 695675 chr3L 695772 695794 13 130 3.5 5.5 4.5 2.4 164 chr3L 695630 intron CG13894 - chr3L 695712 intron CG13894 - chr3L 695794 intron CG13894 - chr3L_13_695001 chr3L_695001 RAL-426 1270 chr3L 705228 705263 chr3L 705324 705359 10 95 5.0 7.5 6.2 1.4 131 chr3L 705228 intergenic CR44514 + chr3L 705294 intergenic CR44514 + chr3L 705359 5` UTR CR44514 + chr3L_10_705001 chr3L_705001 RAL-426 1271 chr3L 719545 719586 chr3L 719667 719721 6 130 3.5 2.0 2.8 1.6 176 chr3L 719545 intergenic not near genes chr3L 719633 intergenic not near genes chr3L 719721 intergenic not near genes chr3L_6_715001 chr3L_715001 RAL-426 1272 chr3L 746473 746522 chr3L 746578 746626 17 103 3.5 2.5 3.0 4.2 153 chr3L 746473 intron hng3 - chr3L 746550 intron hng3 - chr3L 746626 intron hng3 - chr3L_17_745001 chr3L_745001 RAL-426 1273 chr3L 771487 771533 chr3L 771585 771635 17 99 4.0 3.5 3.8 3.5 148 chr3L 771487 intergenic not near genes chr3L 771561 intergenic not near genes chr3L 771635 intergenic not near genes chr3L_17_770001 chr3L_770001 RAL-426 1274 chr3L 789893 789945 chr3L 790398 790450 roo 12 504 0.5 4.0 2.2 3.8 557 chr3L 789893 intergenic not near genes chr3L 790172 intergenic not near genes chr3L 790450 intergenic not near genes chr3L_12_790001 chr3L_790001 RAL-426 1275 chr3L 816283 816310 chr3L 816381 816408 6 98 7.0 0.5 3.8 1.2 125 chr3L 816283 intergenic not near genes chr3L 816346 intergenic not near genes chr3L 816408 intergenic not near genes chr3L_6_815001 chr3L_815001 RAL-426 1276 chr3L 819325 819335 chr3L 819403 819432 4 84 8.0 3.0 5.5 0.6 107 chr3L 819325 intergenic not near genes chr3L 819378 intergenic not near genes chr3L 819432 intergenic not near genes chr3L_4_815001 chr3L_815001 RAL-426 1277 chr3L 878178 878220 chr3L 878278 878321 9 98 7.0 4.5 5.8 1.3 143 chr3L 878178 intron,3` UTR CG32479 +,CG13907 - chr3L 878250 intron,3` UTR CG32479 +,CG13907 - chr3L 878321 intron,3` UTR CG32479 +,CG13907 - chr3L_9_875001 chr3L_875001 RAL-426 1278 chr3L 905027 905058 chr3L 905226 905257 8 196 3.5 5.0 4.2 1.5 230 chr3L 905027 intergenic not near genes chr3L 905142 intergenic not near genes chr3L 905257 intergenic not near genes chr3L_8_905001 chr3L_905001 RAL-426 1279 chr3L 925164 925205 chr3L 932606 932651 mdg1 17 7442 2.0 2.5 2.2 5.3 7487 chr3L 925164 intron Glut1 + chr3L 928908 intron Glut1 + chr3L 932651 intron Glut1 + chr3L_17_925001 chr3L_925001 RAL-426 1280 chr3L 933853 933888 chr3L 934006 934041 7 153 6.5 6.0 6.2 1.0 188 chr3L 933853 intron Glut1 + chr3L 933947 intron Glut1 + chr3L 934041 intron Glut1 + chr3L_7_930001 chr3L_930001 RAL-426 1281 chr3L 939761 939801 chr3L 940894 940915 jockey 16 1135 3.0 5.5 4.2 3.1 1154 chr3L 939761 intron Glut1 + chr3L 940338 intron Glut1 + chr3L 940915 intron Glut1 + chr3L_16_940001 chr3L_940001 RAL-426 1282 chr3L 1008483 1008527 chr3L 1008579 1008600 12 93 4.5 2.5 3.5 2.7 117 chr3L 1008483 intron trio - chr3L 1008542 intron trio - chr3L 1008600 intron trio - chr3L_12_1005001 chr3L_1005001 RAL-426 1283 chr3L 1009071 1009078 chr3L 1009185 1009191 5 114 0.5 9.0 4.8 0.9 120 chr3L 1009071 intron trio - chr3L 1009131 intron trio - chr3L 1009191 intron trio - chr3L_5_1005001 chr3L_1005001 RAL-426 1284 chr3L 1021579 1021606 chr3L 1021671 1021679 6 88 6.5 7.0 6.8 0.8 100 chr3L 1021579 intron trio - chr3L 1021629 intron trio - chr3L 1021679 intron trio - chr3L_6_1020001 chr3L_1020001 RAL-426 1285 chr3L 1021621 1021630 chr3L 1021670 1021684 10 66 4.5 7.0 5.8 1.5 63 chr3L 1021621 intron trio - chr3L 1021652 intron trio - chr3L 1021684 intron trio - chr3L_10_1020001 chr3L_1020001 RAL-426 1286 chr3L 1045552 1045571 chr3L 1045669 1045677 9 115 6.5 6.5 6.5 1.2 125 chr3L 1045552 intron bab1 - chr3L 1045614 intron bab1 - chr3L 1045677 intron bab1 - chr3L_9_1045001 chr3L_1045001 RAL-426 1287 chr3L 1045572 1045583 chr3L 1045657 1045702 9 102 3.0 5.0 4.0 1.8 130 chr3L 1045572 intron bab1 - chr3L 1045637 intron bab1 - chr3L 1045702 intron bab1 - chr3L_9_1045001 chr3L_1045001 RAL-426 1288 chr3L 1061168 1061181 chr3L 1061242 1061278 7 88 6.0 4.5 5.2 1.1 110 chr3L 1061168 intron bab1 - chr3L 1061223 intron bab1 - chr3L 1061278 intron bab1 - chr3L_7_1060001 chr3L_1060001 RAL-426 1289 chr3L 1109626 1109667 chr3L 1109725 1109774 15 99 3.0 4.0 3.5 3.3 148 chr3L 1109626 intergenic not near genes chr3L 1109700 intergenic not near genes chr3L 1109774 intergenic not near genes chr3L_15_1105001 chr3L_1105001 RAL-426 1290 chr3L 1154129 1154161 chr3L 1163286 1163312 roo 9 9162 2.5 3.0 2.8 2.4 9183 chr3L 1154129 intron bab2 - chr3L 1158720 intron bab2 - chr3L 1163312 intron bab2 - chr3L_9_1155001 chr3L_1155001 RAL-426 1291 chr3L 1181041 1181052 chr3L 1181110 1181137 4 74 1.0 3.0 2.0 1.3 96 chr3L 1181041 intergenic not near genes chr3L 1181089 intergenic not near genes chr3L 1181137 intergenic not near genes chr3L_4_1180001 chr3L_1180001 RAL-426 1292 chr3L 1219595 1219625 chr3L 1227334 1227368 412 15 7743 1.5 3.5 2.5 4.3 7773 chr3L 1219595 intron mwh + chr3L 1223482 intron mwh + chr3L 1227368 intron mwh + chr3L_15_1220001 chr3L_1220001 RAL-426 1293 chr3L 1260123 1260162 chr3L 1260222 1260262 10 97 1.5 2.5 2.0 3.3 139 chr3L 1260123 intron CG9134 + chr3L 1260192 intron CG9134 + chr3L 1260262 intron CG9134 + chr3L_10_1260001 chr3L_1260001 RAL-426 1294 chr3L 1288319 1288342 chr3L 1288429 1288449 8 109 0.0 4.5 2.2 2.5 130 chr3L 1288319 intron CG32333 + chr3L 1288384 intron CG32333 + chr3L 1288449 intron CG32333 + chr3L_8_1285001 chr3L_1285001 RAL-426 1295 chr3L 1310981 1311015 chr3L 1315847 1315874 7 4857 25.5 36.0 30.8 0.2 4893 chr3L 1310981 exon CG2469 + chr3L 1313428 intergenic CG9186 -,CG9153 + chr3L 1315874 exon CG9153 + chr3L_7_1310001 chr3L_1310001 RAL-426 1296 chr3L 1321542 1321592 chr3L 1321761 1321763 9 212 2.0 3.0 2.5 2.6 221 chr3L 1321542 intron Myo61F + chr3L 1321652 intron Myo61F + chr3L 1321763 intron Myo61F + chr3L_9_1320001 chr3L_1320001 RAL-426 1297 chr3L 1323830 1323864 chr3L 1323939 1323957 6 107 0.0 8.0 4.0 1.2 127 chr3L 1323830 intron,intron Myo61F +,CR45166 - chr3L 1323894 intron,intron Myo61F +,CR45166 - chr3L 1323957 intron,3` UTR Myo61F +,CR45166 - chr3L_6_1320001 chr3L_1320001 RAL-426 1298 chr3L 1324610 1324656 chr3L 1324704 1324752 9 97 1.5 1.0 1.2 4.1 142 chr3L 1324610 intron Myo61F + chr3L 1324681 intron Myo61F + chr3L 1324752 intron Myo61F + chr3L_9_1320001 chr3L_1320001 RAL-426 1299 chr3L 1342177 1342219 chr3L 1342278 1342320 8 100 0.5 3.5 2.0 2.7 143 chr3L 1342177 intron CG2199 - chr3L 1342248 intron CG2199 - chr3L 1342320 intron CG2199 - chr3L_8_1340001 chr3L_1340001 RAL-426 1300 chr3L 1385154 1385208 chr3L 1385261 1385316 20 107 2.5 2.5 2.5 5.7 162 chr3L 1385154 intron,intron Ptp61F -,ru + chr3L 1385235 intron,intron Ptp61F -,ru + chr3L 1385316 intron,intron Ptp61F -,ru + chr3L_20_1385001 chr3L_1385001 RAL-426 1301 chr3L 1396719 1396756 chr3L 1396823 1396839 11 96 28.0 23.0 25.5 0.4 120 chr3L 1396719 intron Ptp61F - chr3L 1396779 intron Ptp61F - chr3L 1396839 intron Ptp61F - chr3L_11_1395001 chr3L_1395001 RAL-426 1302 chr3L 1415781 1415807 chr3L 1415860 1415860 5 82 3.0 2.0 2.5 1.4 79 chr3L 1415781 intron Ptp61F - chr3L 1415820 intron Ptp61F - chr3L 1415860 intron Ptp61F - chr3L_5_1415001 chr3L_1415001 RAL-426 1303 chr3L 1480974 1481026 chr3L 1481074 1481087 7 84 2.5 3.5 3.0 1.8 113 chr3L 1480974 intron stet - chr3L 1481030 intron stet - chr3L 1481087 intron stet - chr3L_7_1480001 chr3L_1480001 RAL-426 1304 chr3L 1571467 1571488 chr3L 1571572 1571593 5 105 3.5 5.0 4.2 1.0 126 chr3L 1571467 intron CG12004 + chr3L 1571530 intron CG12004 + chr3L 1571593 intron CG12004 + chr3L_5_1570001 chr3L_1570001 RAL-426 1305 chr3L 1581168 1581178 chr3L 1581488 1581502 6 337 0.0 3.5 1.8 2.1 334 chr3L 1581168 intron CG13917 + chr3L 1581335 intron CG13917 + chr3L 1581502 intron CG13917 + chr3L_6_1580001 chr3L_1580001 RAL-426 1306 chr3L 1585915 1585932 chr3L 1586017 1586034 5 99 5.5 0.0 2.8 1.3 119 chr3L 1585915 intron CG13917 + chr3L 1585974 intron CG13917 + chr3L 1586034 intron CG13917 + chr3L_5_1585001 chr3L_1585001 RAL-426 1307 chr3L 1618190 1618236 chr3L 1618298 1618347 12 110 3.0 4.5 3.8 2.5 157 chr3L 1618190 intergenic CG13926 -,ABCB7 +,CG33230 + chr3L 1618268 intergenic CG13926 -,ABCB7 +,CG33230 + chr3L 1618347 intergenic ABCB7 +,CG33230 +,CG13926 - chr3L_12_1615001 chr3L_1615001 RAL-426 1308 chr3L 1726144 1726152 chr3L 1726260 1726268 4 116 6.0 4.5 5.2 0.6 124 chr3L 1726144 intron drpr - chr3L 1726206 intron drpr - chr3L 1726268 intron drpr - chr3L_4_1725001 chr3L_1725001 RAL-426 1309 chr3L 1726153 1726186 chr3L 1726255 1726296 18 110 2.5 3.0 2.8 4.7 143 chr3L 1726153 intron drpr - chr3L 1726224 intron drpr - chr3L 1726296 intron drpr - chr3L_18_1725001 chr3L_1725001 RAL-426 1310 chr3L 1726593 1726604 chr3L 1726691 1726703 8 96 4.0 2.0 3.0 2.0 110 chr3L 1726593 intron drpr - chr3L 1726648 intron drpr - chr3L 1726703 intron drpr - chr3L_8_1725001 chr3L_1725001 RAL-426 1311 chr3L 1740845 1740880 chr3L 1741100 1741126 pogo 6 252 6.5 6.5 6.5 0.8 281 chr3L 1740845 intron Gk + chr3L 1740986 intron Gk + chr3L 1741126 intron Gk + chr3L_6_1740001 chr3L_1740001 RAL-426 1312 chr3L 1805677 1805700 chr3L 1805871 1805894 6 192 3.0 2.0 2.5 1.7 217 chr3L 1805677 exon CG42676 + chr3L 1805786 intron CG42676 + chr3L 1805894 intron CG42676 + chr3L_6_1805001 chr3L_1805001 RAL-426 1313 chr3L 1823383 1823434 chr3L 1823503 1823554 11 107 2.0 6.0 4.0 2.2 171 chr3L 1823383 intergenic GV1 + chr3L 1823468 intergenic not near genes chr3L 1823554 intergenic not near genes chr3L_11_1820001 chr3L_1820001 RAL-426 1314 chr3L 1853031 1853051 chr3L 1853135 1853153 8 104 6.0 3.5 4.8 1.4 122 chr3L 1853031 intron CG13936 - chr3L 1853092 intron CG13936 - chr3L 1853153 intron CG13936 - chr3L_8_1850001 chr3L_1850001 RAL-426 1315 chr3L 1901365 1901399 chr3L 1901478 1901512 11 107 4.5 7.5 6.0 1.6 147 chr3L 1901365 intron CG1887 - chr3L 1901438 intron CG1887 - chr3L 1901512 intron CG1887 - chr3L_11_1900001 chr3L_1900001 RAL-426 1316 chr3L 1932061 1932084 chr3L 1932172 1932195 6 111 1.0 3.5 2.2 1.9 134 chr3L 1932061 intron Dbx + chr3L 1932128 intron Dbx + chr3L 1932195 intron Dbx + chr3L_6_1930001 chr3L_1930001 RAL-426 1317 chr3L 1944968 1945015 chr3L 1948021 1948048 7 3035 30.5 9.0 19.8 0.3 3080 chr3L 1944968 exon mu2 - chr3L 1946508 intron mu2 - chr3L 1948048 exon Cnb + chr3L_7_1945001 chr3L_1945001 RAL-426 1318 chr3L 1984707 1984725 chr3L 1984805 1984823 7 98 1.0 5.5 3.2 1.7 116 chr3L 1984707 intergenic not near genes chr3L 1984765 intergenic not near genes chr3L 1984823 intergenic not near genes chr3L_7_1980001 chr3L_1980001 RAL-426 1319 chr3L 1988829 1988873 chr3L 1989017 1989046 8 189 1.0 1.5 1.2 3.6 217 chr3L 1988829 intergenic not near genes chr3L 1988938 intergenic not near genes chr3L 1989046 intergenic not near genes chr3L_8_1985001 chr3L_1985001 RAL-426 1320 chr3L 2018831 2018853 chr3L 2019121 2019127 4 284 7.5 2.0 4.8 0.7 296 chr3L 2018831 intergenic not near genes chr3L 2018979 intergenic not near genes chr3L 2019127 intergenic not near genes chr3L_4_2015001 chr3L_2015001 RAL-426 1321 chr3L 2018856 2018883 chr3L 2019120 2019149 8 268 5.5 2.0 3.8 1.7 293 chr3L 2018856 intergenic not near genes chr3L 2019002 intergenic not near genes chr3L 2019149 intergenic not near genes chr3L_8_2015001 chr3L_2015001 RAL-426 1322 chr3L 2159661 2159775 chr3L 2159831 2159883 5 154 0.0 4.0 2.0 1.7 222 chr3L 2159661 intron CG15822 - chr3L 2159772 intron CG15822 - chr3L 2159883 intron CG15822 - chr3L_5_2155001 chr3L_2155001 RAL-426 1323 chr3L 2172836 2172879 chr3L 2172952 2172991 10 113 1.0 4.5 2.8 2.6 155 chr3L 2172836 intergenic CG15820 - chr3L 2172914 intergenic CG15820 - chr3L 2172991 intergenic CG15820 - chr3L_10_2170001 chr3L_2170001 RAL-426 1324 chr3L 2277962 2278009 chr3L 2278178 2278225 16 214 2.5 2.5 2.5 4.6 263 chr3L 2277962 3` UTR yellow-g2 + chr3L 2278094 intergenic yellow-g2 + chr3L 2278225 intergenic yellow-g2 + chr3L_16_2275001 chr3L_2275001 RAL-426 1325 chr3L 2310524 2310554 chr3L 2310656 2310663 14 137 3.5 2.0 2.8 3.7 139 chr3L 2310524 intergenic not near genes chr3L 2310594 intergenic not near genes chr3L 2310663 intergenic not near genes chr3L_14_2310001 chr3L_2310001 RAL-426 1326 chr3L 2331574 2331613 chr3L 2331660 2331710 15 91 6.0 2.0 4.0 3.0 136 chr3L 2331574 intron MsR1 + chr3L 2331642 intron MsR1 + chr3L 2331710 intron MsR1 + chr3L_15_2330001 chr3L_2330001 RAL-426 1327 chr3L 2334615 2334638 chr3L 2334782 2334805 9 165 5.0 3.5 4.2 1.7 190 chr3L 2334615 intron MsR1 + chr3L 2334710 intron MsR1 + chr3L 2334805 intron MsR1 + chr3L_9_2330001 chr3L_2330001 RAL-426 1328 chr3L 2382702 2382734 chr3L 2382784 2382832 6 84 1.5 1.0 1.2 2.7 130 chr3L 2382702 intergenic not near genes chr3L 2382767 intergenic not near genes chr3L 2382832 intergenic not near genes chr3L_6_2380001 chr3L_2380001 RAL-426 1329 chr3L 2419879 2419912 chr3L 2422810 2422849 15 2932 32.5 39.0 35.8 0.4 2970 chr3L 2419879 intron CG45186 + chr3L 2421364 intron CG45186 + chr3L 2422849 intron CG45186 + chr3L_15_2420001 chr3L_2420001 RAL-426 1330 chr3L 2447487 2447532 chr3L 2456661 2456705 roo 7 9172 5.5 7.0 6.2 1.0 9218 chr3L 2447487 intron CG45186 + chr3L 2452096 intron CG45186 + chr3L 2456705 intron CG45186 + chr3L_7_2450001 chr3L_2450001 RAL-426 1331 chr3L 2515416 2515429 chr3L 2515516 2515531 4 102 1.0 10.5 5.8 0.6 115 chr3L 2515416 intron Spn - chr3L 2515474 intron Spn - chr3L 2515531 intron Spn - chr3L_4_2515001 chr3L_2515001 RAL-426 1332 chr3L 2517192 2517234 chr3L 2517291 2517334 10 97 2.5 8.0 5.2 1.6 142 chr3L 2517192 intron,5` UTR Spn -,CR45170 + chr3L 2517263 intron,5` UTR Spn -,CR45170 + chr3L 2517334 intron,intron Spn -,CR45170 + chr3L_10_2515001 chr3L_2515001 RAL-426 1333 chr3L 2532189 2532198 chr3L 2532289 2532296 4 98 13.5 3.5 8.5 0.4 107 chr3L 2532189 intron Spn - chr3L 2532242 intron Spn - chr3L 2532296 intron Spn - chr3L_4_2530001 chr3L_2530001 RAL-426 1334 chr3L 2532218 2532239 chr3L 2532284 2532326 6 82 6.0 3.0 4.5 1.1 108 chr3L 2532218 intron Spn - chr3L 2532272 intron Spn - chr3L 2532326 intron Spn - chr3L_6_2530001 chr3L_2530001 RAL-426 1335 chr3L 2533659 2533667 chr3L 2533729 2533745 5 77 7.0 5.0 6.0 0.7 86 chr3L 2533659 intron Spn - chr3L 2533702 intron Spn - chr3L 2533745 intron Spn - chr3L_5_2530001 chr3L_2530001 RAL-426 1336 chr3L 2581898 2581904 chr3L 2581993 2582008 5 108 4.0 5.5 4.8 0.9 110 chr3L 2581898 intron msn - chr3L 2581953 intron msn - chr3L 2582008 intron msn - chr3L_5_2580001 chr3L_2580001 RAL-426 1337 chr3L 2683928 2683962 chr3L 2684024 2684058 10 95 4.5 3.5 4.0 2.0 130 chr3L 2683928 intron Fife - chr3L 2683993 intron Fife - chr3L 2684058 intron Fife - chr3L_10_2680001 chr3L_2680001 RAL-426 1338 chr3L 2719517 2719555 chr3L 2719639 2719677 10 122 3.5 3.5 3.5 2.2 160 chr3L 2719517 3` UTR Mrtf - chr3L 2719597 3` UTR Mrtf - chr3L 2719677 3` UTR Mrtf - chr3L_10_2715001 chr3L_2715001 RAL-426 1339 chr3L 2734283 2734324 chr3L 2734383 2734424 4 99 0.0 7.0 3.5 0.9 141 chr3L 2734283 intron Mrtf - chr3L 2734354 intron Mrtf - chr3L 2734424 intron Mrtf - chr3L_4_2730001 chr3L_2730001 RAL-426 1340 chr3L 2795704 2795748 chr3L 2795847 2795891 18 138 1.5 3.5 2.5 5.1 187 chr3L 2795704 intron CG43444 - chr3L 2795798 intron CG43444 - chr3L 2795891 intron CG43444 - chr3L_18_2795001 chr3L_2795001 RAL-426 1341 chr3L 2841589 2841636 chr3L 2841694 2841745 10 98 3.0 2.5 2.8 2.6 156 chr3L 2841589 intron CG43444 - chr3L 2841667 intron CG43444 - chr3L 2841745 intron CG43444 - chr3L_10_2840001 chr3L_2840001 RAL-426 1342 chr3L 2853701 2853713 chr3L 2853916 2853928 4 215 4.5 3.0 3.8 0.8 227 chr3L 2853701 intron CG43444 - chr3L 2853814 intron CG43444 - chr3L 2853928 intron CG43444 - chr3L_4_2850001 chr3L_2850001 RAL-426 1343 chr3L 2879670 2879672 chr3L 2879748 2879776 4 106 7.0 4.5 5.8 0.6 106 chr3L 2879670 intergenic not near genes chr3L 2879723 intergenic not near genes chr3L 2879776 intergenic not near genes chr3L_4_2875001 chr3L_2875001 RAL-426 1344 chr3L 2897393 2897425 chr3L 2897513 2897551 7 124 2.5 2.0 2.2 2.2 158 chr3L 2897393 5` UTR Shab + chr3L 2897472 intron Shab + chr3L 2897551 intron Shab + chr3L_7_2895001 chr3L_2895001 RAL-426 1345 chr3L 2917632 2917668 chr3L 2917797 2917832 6 160 4.5 2.0 3.2 1.4 200 chr3L 2917632 intron Shab + chr3L 2917732 intron Shab + chr3L 2917832 intron Shab + chr3L_6_2915001 chr3L_2915001 RAL-426 1346 chr3L 2927836 2927866 chr3L 2936119 2936119 Tirant 6 8286 4.0 2.0 3.0 1.5 8283 chr3L 2927836 intron Shab + chr3L 2931978 intron Shab + chr3L 2936119 intron Shab + chr3L_6_2930001 chr3L_2930001 RAL-426 1347 chr3L 2966174 2966192 chr3L 2966289 2966300 4 113 8.5 3.0 5.8 0.6 126 chr3L 2966174 intergenic not near genes chr3L 2966237 intergenic not near genes chr3L 2966300 intergenic not near genes chr3L_4_2965001 chr3L_2965001 RAL-426 1348 chr3L 2966704 2966723 chr3L 2974149 2974168 mdg1 6 7445 4.5 0.0 2.2 1.9 7464 chr3L 2966704 intergenic not near genes chr3L 2970436 intergenic not near genes chr3L 2974168 intergenic not near genes chr3L_6_2970001 chr3L_2970001 RAL-426 1349 chr3L 2977812 2977836 chr3L 2977923 2977948 7 112 8.0 5.5 6.8 0.9 136 chr3L 2977812 intergenic not near genes chr3L 2977880 intergenic not near genes chr3L 2977948 intergenic not near genes chr3L_7_2975001 chr3L_2975001 RAL-426 1350 chr3L 3007567 3007617 chr3L 3007751 3007801 7 189 13.5 6.5 10.0 0.6 234 chr3L 3007567 intron FMRFaR + chr3L 3007684 intron FMRFaR + chr3L 3007801 intron FMRFaR + chr3L_7_3005001 chr3L_3005001 RAL-426 1351 chr3L 3020987 3021034 chr3L 3021159 3021206 16 168 4.0 6.5 5.2 2.6 219 chr3L 3020987 intergenic not near genes chr3L 3021096 intergenic not near genes chr3L 3021206 intergenic not near genes chr3L_16_3020001 chr3L_3020001 RAL-426 1352 chr3L 3028995 3029015 chr3L 3029101 3029120 7 105 5.0 6.0 5.5 1.1 125 chr3L 3028995 intergenic not near genes chr3L 3029058 intergenic not near genes chr3L 3029120 intergenic not near genes chr3L_7_3025001 chr3L_3025001 RAL-426 1353 chr3L 3155552 3155593 chr3L 3155652 3155693 12 97 1.5 2.0 1.8 4.3 141 chr3L 3155552 intron BtbVII + chr3L 3155622 intron BtbVII + chr3L 3155693 intron BtbVII + chr3L_12_3155001 chr3L_3155001 RAL-426 1354 chr3L 3167435 3167486 chr3L 3167558 3167609 14 122 4.5 4.5 4.5 2.5 174 chr3L 3167435 intron CG32280 + chr3L 3167522 intron CG32280 + chr3L 3167609 intron CG32280 + chr3L_14_3165001 chr3L_3165001 RAL-426 1355 chr3L 3193434 3193480 chr3L 3193545 3193560 15 107 3.5 4.5 4.0 3.0 126 chr3L 3193434 intron Hsp83 + chr3L 3193497 intron Hsp83 + chr3L 3193560 intron Hsp83 + chr3L_15_3190001 chr3L_3190001 RAL-426 1356 chr3L 3243107 3243128 chr3L 3243243 3243264 12 135 7.5 0.5 4.0 2.4 157 chr3L 3243107 intergenic CG12078 - chr3L 3243186 intergenic CG12078 - chr3L 3243264 intergenic CG12078 - chr3L_12_3240001 chr3L_3240001 RAL-426 1357 chr3L 3273286 3273326 chr3L 3273442 3273481 8 155 5.0 3.0 4.0 1.6 195 chr3L 3273286 intron CG14960 + chr3L 3273384 intron CG14960 + chr3L 3273481 intron CG14960 + chr3L_8_3270001 chr3L_3270001 RAL-426 1358 chr3L 3281455 3281472 chr3L 3281931 3281951 Doc 14 493 3.5 8.5 6.0 2.0 496 chr3L 3281455 intron CG12017 + chr3L 3281703 intron CG12017 + chr3L 3281951 intron CG12017 + chr3L_14_3280001 chr3L_3280001 RAL-426 1359 chr3L 3285624 3285667 chr3L 3285727 3285753 15 99 1.5 2.5 2.0 5.0 129 chr3L 3285624 intron CG12017 + chr3L 3285688 intron CG12017 + chr3L 3285753 intron CG12017 + chr3L_15_3285001 chr3L_3285001 RAL-426 1360 chr3L 3294120 3294138 chr3L 3294231 3294249 7 110 3.0 4.0 3.5 1.6 129 chr3L 3294120 intron CG12009 + chr3L 3294184 intron CG12009 + chr3L 3294249 intron CG12009 + chr3L_7_3290001 chr3L_3290001 RAL-426 1361 chr3L 3317521 3317566 chr3L 3317610 3317657 9 95 1.5 2.5 2.0 3.0 136 chr3L 3317521 intergenic Drsl5 + chr3L 3317589 intergenic PIG-C -,Drsl5 + chr3L 3317657 intergenic PIG-C - chr3L_9_3315001 chr3L_3315001 RAL-426 1362 chr3L 3475067 3475093 chr3L 3475528 3475538 jockey 7 458 2.5 7.5 5.0 1.2 471 chr3L 3475067 intron CG42324 + chr3L 3475302 intron CG42324 + chr3L 3475538 intron CG42324 + chr3L_7_3475001 chr3L_3475001 RAL-426 1363 chr3L 3500171 3500181 chr3L 3500237 3500265 5 74 3.5 3.0 3.2 1.2 94 chr3L 3500171 intron CG42324 + chr3L 3500218 intron CG42324 + chr3L 3500265 intron CG42324 + chr3L_5_3500001 chr3L_3500001 RAL-426 1364 chr3L 3573147 3573191 chr3L 3573250 3573294 9 103 4.5 1.0 2.8 2.4 147 chr3L 3573147 intron Eip63E + chr3L 3573220 intron Eip63E + chr3L 3573294 intron Eip63E + chr3L_9_3570001 chr3L_3570001 RAL-426 1365 chr3L 3574476 3574512 chr3L 3574627 3574666 11 151 0.0 3.5 1.8 3.9 190 chr3L 3574476 intron Eip63E + chr3L 3574571 intron Eip63E + chr3L 3574666 intron Eip63E + chr3L_11_3570001 chr3L_3570001 RAL-426 1366 chr3L 3581735 3581771 chr3L 3581836 3581876 9 102 2.0 4.0 3.0 2.2 141 chr3L 3581735 intron Eip63E + chr3L 3581806 intron Eip63E + chr3L 3581876 intron Eip63E + chr3L_9_3580001 chr3L_3580001 RAL-426 1367 chr3L 3601281 3601304 chr3L 3606612 3606632 copia 9 5328 9.5 4.5 7.0 1.1 5351 chr3L 3601281 intron Eip63E + chr3L 3603956 intron Eip63E + chr3L 3606632 intron Eip63E + chr3L_9_3600001 chr3L_3600001 RAL-426 1368 chr3L 3601305 3601328 chr3L 3606610 3606658 copia 10 5324 5.0 4.0 4.5 1.8 5353 chr3L 3601305 intron Eip63E + chr3L 3603982 intron Eip63E + chr3L 3606658 intron Eip63E + chr3L_10_3600001 chr3L_3600001 RAL-426 1369 chr3L 3619383 3619428 chr3L 3619497 3619542 14 109 5.5 2.0 3.8 2.9 159 chr3L 3619383 intergenic not near genes chr3L 3619462 intergenic not near genes chr3L 3619542 intergenic not near genes chr3L_14_3615001 chr3L_3615001 RAL-426 1370 chr3L 3720671 3720722 chr3L 3720767 3720824 8 97 3.0 4.0 3.5 1.8 153 chr3L 3720671 intron CG32264 - chr3L 3720748 intron CG32264 - chr3L 3720824 intron CG32264 - chr3L_8_3720001 chr3L_3720001 RAL-426 1371 chr3L 3763737 3763753 chr3L 3763838 3763854 6 101 8.5 0.0 4.2 1.2 117 chr3L 3763737 intron CG32264 - chr3L 3763796 intron CG32264 - chr3L 3763854 intron CG32264 - chr3L_6_3760001 chr3L_3760001 RAL-426 1372 chr3L 3815031 3815078 chr3L 3815132 3815179 17 99 3.0 3.0 3.0 4.2 148 chr3L 3815031 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815105 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815179 intron,intron Scsalpha +,CR43932 - chr3L_17_3815001 chr3L_3815001 RAL-426 1373 chr3L 3833725 3833766 chr3L 3833986 3834027 pogo 11 260 3.0 4.0 3.5 2.4 302 chr3L 3833725 intron enc + chr3L 3833876 intron enc + chr3L 3834027 intron enc + chr3L_11_3830001 chr3L_3830001 RAL-426 1374 chr3L 3849308 3849340 chr3L 3849415 3849446 13 107 2.0 6.0 4.0 2.6 138 chr3L 3849308 intron Awh + chr3L 3849377 intron Awh + chr3L 3849446 intron Awh + chr3L_13_3845001 chr3L_3845001 RAL-426 1375 chr3L 3853583 3853627 chr3L 3853695 3853739 6 99 5.0 2.5 3.8 1.2 156 chr3L 3853583 intron Awh + chr3L 3853661 intron Awh + chr3L 3853739 intron Awh + chr3L_6_3850001 chr3L_3850001 RAL-426 1376 chr3L 3889124 3889147 chr3L 3889226 3889249 8 101 4.0 3.0 3.5 1.8 125 chr3L 3889124 intergenic not near genes chr3L 3889186 intergenic not near genes chr3L 3889249 intergenic not near genes chr3L_8_3885001 chr3L_3885001 RAL-426 1377 chr3L 3960206 3960210 chr3L 3960472 3960477 5 269 8.0 4.0 6.0 0.7 271 chr3L 3960206 intron CG12605 - chr3L 3960342 intron CG12605 - chr3L 3960477 intron CG12605 - chr3L_5_3960001 chr3L_3960001 RAL-426 1378 chr3L 4049279 4049305 chr3L 4049386 4049410 5 106 2.0 5.5 3.8 1.0 131 chr3L 4049279 intron CG1136 + chr3L 4049344 intron CG1136 + chr3L 4049410 intron CG1136 + chr3L_5_4045001 chr3L_4045001 RAL-426 1379 chr3L 4052230 4052282 chr3L 4052321 4052349 17 89 3.0 3.0 3.0 4.2 119 chr3L 4052230 intron CG1136 + chr3L 4052290 intron CG1136 + chr3L 4052349 intron CG1136 + chr3L_17_4050001 chr3L_4050001 RAL-426 1380 chr3L 4145889 4145941 chr3L 4145993 4146045 16 99 2.0 2.5 2.2 5.0 156 chr3L 4145889 3` UTR CG32260 + chr3L 4145967 intergenic CG32260 + chr3L 4146045 intergenic CG32260 + chr3L_16_4145001 chr3L_4145001 RAL-426 1381 chr3L 4146809 4146840 chr3L 4146910 4146942 8 102 0.0 6.5 3.2 1.9 133 chr3L 4146809 intergenic not near genes chr3L 4146876 intergenic not near genes chr3L 4146942 intergenic not near genes chr3L_8_4145001 chr3L_4145001 RAL-426 1382 chr3L 4209813 4209849 chr3L 4209911 4209943 11 98 1.0 4.5 2.8 2.9 130 chr3L 4209813 intron CG43367 + chr3L 4209878 intron CG43367 + chr3L 4209943 intron CG43367 + chr3L_11_4205001 chr3L_4205001 RAL-426 1383 chr3L 4238745 4238784 chr3L 4238852 4238883 4 103 0.0 0.5 0.2 3.3 138 chr3L 4238745 intergenic not near genes chr3L 4238814 intergenic not near genes chr3L 4238883 intergenic not near genes chr3L_4_4235001 chr3L_4235001 RAL-426 1384 chr3L 4306977 4307002 chr3L 4307090 4307115 7 113 4.5 0.0 2.2 2.2 138 chr3L 4306977 intron dyl - chr3L 4307046 intron dyl - chr3L 4307115 intron dyl - chr3L_7_4305001 chr3L_4305001 RAL-426 1385 chr3L 4328735 4328761 chr3L 4336253 4336279 412 8 7515 4.0 3.5 3.8 1.7 7544 chr3L 4328735 intron Cip4 - chr3L 4332507 intron Cip4 - chr3L 4336279 exon Cip4 - chr3L_8_4330001 chr3L_4330001 RAL-426 1386 chr3L 4342398 4342441 chr3L 4342488 4342495 8 86 2.5 3.0 2.8 2.1 97 chr3L 4342398 intron Cip4 - chr3L 4342446 intron Cip4 - chr3L 4342495 intron Cip4 - chr3L_8_4340001 chr3L_4340001 RAL-426 1387 chr3L 4390014 4390066 chr3L 4390111 4390164 4 94 0.0 3.0 1.5 1.6 150 chr3L 4390014 intron slow + chr3L 4390089 intron slow + chr3L 4390164 intron slow + chr3L_4_4390001 chr3L_4390001 RAL-426 1388 chr3L 4519411 4519440 chr3L 4519508 4519537 10 95 7.0 6.0 6.5 1.3 126 chr3L 4519411 intron Tie - chr3L 4519474 intron Tie - chr3L 4519537 intron Tie - chr3L_10_4515001 chr3L_4515001 RAL-426 1389 chr3L 4554127 4554153 chr3L 4554281 4554310 10 156 2.0 2.0 2.0 3.3 183 chr3L 4554127 intergenic CG33777 - chr3L 4554218 intergenic CG33777 - chr3L 4554310 intergenic CG33777 - chr3L_10_4550001 chr3L_4550001 RAL-426 1390 chr3L 4597206 4597238 chr3L 4597307 4597327 6 95 3.5 9.0 6.2 0.8 121 chr3L 4597206 intron Src64B - chr3L 4597266 intron Src64B - chr3L 4597327 intron Src64B - chr3L_6_4595001 chr3L_4595001 RAL-426 1391 chr3L 4604851 4604889 chr3L 4604977 4604979 9 121 10.0 3.0 6.5 1.2 128 chr3L 4604851 intron Src64B - chr3L 4604915 intron Src64B - chr3L 4604979 intron Src64B - chr3L_9_4600001 chr3L_4600001 RAL-426 1392 chr3L 4607250 4607287 chr3L 4607360 4607397 7 106 2.0 4.0 3.0 1.8 147 chr3L 4607250 intron Src64B - chr3L 4607324 intron Src64B - chr3L 4607397 intron Src64B - chr3L_7_4605001 chr3L_4605001 RAL-426 1393 chr3L 4624741 4624782 chr3L 4624828 4624881 12 86 2.5 0.5 1.5 4.8 140 chr3L 4624741 intron Src64B - chr3L 4624811 intron Src64B - chr3L 4624881 intron Src64B - chr3L_12_4620001 chr3L_4620001 RAL-426 1394 chr3L 4648441 4648452 chr3L 4648550 4648562 6 110 3.5 5.5 4.5 1.1 121 chr3L 4648441 intron,5` UTR axo -,CG32238 + chr3L 4648502 intron,5` UTR axo -,CG32238 + chr3L 4648562 intron,5` UTR axo -,CG32238 + chr3L_6_4645001 chr3L_4645001 RAL-426 1395 chr3L 4654171 4654206 chr3L 4654272 4654307 14 100 5.5 4.5 5.0 2.3 136 chr3L 4654171 intron axo - chr3L 4654239 intron axo - chr3L 4654307 intron axo - chr3L_14_4650001 chr3L_4650001 RAL-426 1396 chr3L 4681785 4681833 chr3L 4681889 4681937 4 104 1.0 2.0 1.5 1.6 152 chr3L 4681785 intron axo - chr3L 4681861 intron axo - chr3L 4681937 intron axo - chr3L_4_4680001 chr3L_4680001 RAL-426 1397 chr3L 4699278 4699302 chr3L 4699378 4699402 4 100 4.5 2.5 3.5 0.9 124 chr3L 4699278 intron RhoGEF64C + chr3L 4699340 intron RhoGEF64C + chr3L 4699402 intron RhoGEF64C + chr3L_4_4695001 chr3L_4695001 RAL-426 1398 chr3L 4797614 4797648 chr3L 4797713 4797731 8 96 5.5 4.0 4.8 1.4 117 chr3L 4797614 intergenic not near genes chr3L 4797672 intergenic not near genes chr3L 4797731 intergenic not near genes chr3L_8_4795001 chr3L_4795001 RAL-426 1399 chr3L 4840382 4840413 chr3L 4840511 4840541 4 129 0.5 2.0 1.2 1.8 159 chr3L 4840382 intergenic CG13707 - chr3L 4840462 intergenic CG13707 - chr3L 4840541 intergenic CG13707 - chr3L_4_4840001 chr3L_4840001 RAL-426 1400 chr3L 4862084 4862130 chr3L 4862182 4862231 13 90 7.5 3.5 5.5 2.0 147 chr3L 4862084 intron CG17150 + chr3L 4862158 intron CG17150 + chr3L 4862231 intron CG17150 + chr3L_13_4860001 chr3L_4860001 RAL-426 1401 chr3L 4901110 4901130 chr3L 4907320 4907340 diver 5 6209 5.0 6.5 5.8 0.7 6230 chr3L 4901110 intergenic CG13704 + chr3L 4904225 intergenic not near genes chr3L 4907340 intergenic not near genes chr3L_5_4900001 chr3L_4900001 RAL-426 1402 chr3L 4901131 4901137 chr3L 4907315 4907346 diver 4 6200 5.0 4.5 4.8 0.7 6215 chr3L 4901131 intergenic CG13704 + chr3L 4904238 intergenic not near genes chr3L 4907346 intergenic not near genes chr3L_4_4900001 chr3L_4900001 RAL-426 1403 chr3L 4989176 4989192 chr3L 4989286 4989294 8 108 0.0 0.0 0.0 8.0 118 chr3L 4989176 intron Con - chr3L 4989235 intron Con - chr3L 4989294 intron Con - chr3L_8_4985001 chr3L_4985001 RAL-426 1404 chr3L 5034141 5034168 chr3L 5043313 5043315 roo 5 9165 6.0 0.0 3.0 1.2 9174 chr3L 5034141 intron Con - chr3L 5038728 intron Con - chr3L 5043315 intron Con - chr3L_5_5035001 chr3L_5035001 RAL-426 1405 chr3L 5045449 5045488 chr3L 5050250 5050275 Doc 9 4797 5.0 5.5 5.2 1.5 4826 chr3L 5045449 intron Con - chr3L 5047862 intron Con - chr3L 5050275 intron Con - chr3L_9_5045001 chr3L_5045001 RAL-426 1406 chr3L 5104464 5104494 chr3L 5124617 5124646 11 20153 4.5 0.0 2.2 3.4 20182 chr3L 5104464 intergenic not near genes chr3L 5114555 intergenic not near genes chr3L 5124646 intergenic not near genes chr3L_11_5110001 chr3L_5110001 RAL-426 1407 chr3L 5164617 5164661 chr3L 5164712 5164756 10 93 4.0 1.5 2.8 2.6 139 chr3L 5164617 intron shep - chr3L 5164686 intron shep - chr3L 5164756 intron shep - chr3L_10_5160001 chr3L_5160001 RAL-426 1408 chr3L 5172575 5172609 chr3L 5172669 5172709 4 101 6.0 6.5 6.2 0.6 134 chr3L 5172575 intron shep - chr3L 5172642 intron shep - chr3L 5172709 intron shep - chr3L_4_5170001 chr3L_5170001 RAL-426 1409 chr3L 5194385 5194394 chr3L 5194479 5194490 5 95 0.0 6.5 3.2 1.2 105 chr3L 5194385 intron shep - chr3L 5194438 intron shep - chr3L 5194490 intron shep - chr3L_5_5190001 chr3L_5190001 RAL-426 1410 chr3L 5203084 5203111 chr3L 5203209 5203236 10 124 0.0 3.5 1.8 3.6 152 chr3L 5203084 intron shep - chr3L 5203160 intron shep - chr3L 5203236 intron shep - chr3L_10_5200001 chr3L_5200001 RAL-426 1411 chr3L 5261164 5261182 chr3L 5261257 5261275 7 95 5.0 3.5 4.2 1.3 111 chr3L 5261164 intron shep - chr3L 5261220 intron shep - chr3L 5261275 intron shep - chr3L_7_5260001 chr3L_5260001 RAL-426 1412 chr3L 5271159 5271202 chr3L 5271255 5271285 10 95 0.5 2.5 1.5 4.0 126 chr3L 5271159 intron shep - chr3L 5271222 intron shep - chr3L 5271285 intron shep - chr3L_10_5270001 chr3L_5270001 RAL-426 1413 chr3L 5292258 5292297 chr3L 5292364 5292403 5 106 2.0 2.5 2.2 1.6 145 chr3L 5292258 intergenic not near genes chr3L 5292330 intergenic not near genes chr3L 5292403 intergenic not near genes chr3L_5_5290001 chr3L_5290001 RAL-426 1414 chr3L 5299136 5299161 chr3L 5306592 5306610 Quasimodo 4 7454 4.0 1.5 2.8 1.1 7474 chr3L 5299136 intergenic not near genes chr3L 5302873 intergenic not near genes chr3L 5306610 intergenic not near genes chr3L_4_5300001 chr3L_5300001 RAL-426 1415 chr3L 5310368 5310385 chr3L 5310483 5310507 10 132 6.5 4.5 5.5 1.5 139 chr3L 5310368 intergenic not near genes chr3L 5310438 intergenic not near genes chr3L 5310507 intergenic not near genes chr3L_10_5310001 chr3L_5310001 RAL-426 1416 chr3L 5330511 5330536 chr3L 5330620 5330629 4 104 7.0 4.5 5.8 0.6 118 chr3L 5330511 intergenic not near genes chr3L 5330570 intergenic not near genes chr3L 5330629 intergenic not near genes chr3L_4_5330001 chr3L_5330001 RAL-426 1417 chr3L 5337334 5337385 chr3L 5337547 5337598 15 209 5.0 6.5 5.8 2.2 264 chr3L 5337334 intergenic not near genes chr3L 5337466 intergenic not near genes chr3L 5337598 intergenic not near genes chr3L_15_5335001 chr3L_5335001 RAL-426 1418 chr3L 5376021 5376044 chr3L 5376120 5376141 5 98 0.0 3.0 1.5 2.0 120 chr3L 5376021 intergenic not near genes chr3L 5376081 intergenic not near genes chr3L 5376141 intergenic not near genes chr3L_5_5375001 chr3L_5375001 RAL-426 1419 chr3L 5393159 5393203 chr3L 5393262 5393297 12 98 6.5 4.0 5.2 1.9 138 chr3L 5393159 intergenic not near genes chr3L 5393228 intergenic not near genes chr3L 5393297 intergenic not near genes chr3L_12_5390001 chr3L_5390001 RAL-426 1420 chr3L 5449514 5449546 chr3L 5449612 5449645 9 99 4.5 4.0 4.2 1.7 131 chr3L 5449514 intergenic not near genes chr3L 5449580 intergenic not near genes chr3L 5449645 intergenic not near genes chr3L_9_5445001 chr3L_5445001 RAL-426 1421 chr3L 5498368 5498432 chr3L 5498477 5498528 4 100 0.5 2.5 1.5 1.6 160 chr3L 5498368 exon blanks - chr3L 5498448 exon blanks - chr3L 5498528 exon blanks - chr3L_4_5495001 chr3L_5495001 RAL-426 1422 chr3L 5504544 5504570 chr3L 5504637 5504667 6 97 3.5 3.5 3.5 1.3 123 chr3L 5504544 intron CG34342 - chr3L 5504606 intron CG34342 - chr3L 5504667 intron CG34342 - chr3L_6_5500001 chr3L_5500001 RAL-426 1423 chr3L 5508636 5508664 chr3L 5508732 5508759 12 96 4.5 6.0 5.2 1.9 123 chr3L 5508636 intron CG34342 - chr3L 5508698 intron CG34342 - chr3L 5508759 intron CG34342 - chr3L_12_5505001 chr3L_5505001 RAL-426 1424 chr3L 5511873 5511901 chr3L 5511974 5512002 4 99 4.0 6.0 5.0 0.7 129 chr3L 5511873 intergenic not near genes chr3L 5511938 intergenic Lkr - chr3L 5512002 intergenic Lkr - chr3L_4_5510001 chr3L_5510001 RAL-426 1425 chr3L 5519798 5519837 chr3L 5519899 5519913 6 95 6.5 1.0 3.8 1.2 115 chr3L 5519798 intron Lkr - chr3L 5519856 intron Lkr - chr3L 5519913 intron Lkr - chr3L_6_5515001 chr3L_5515001 RAL-426 1426 chr3L 5537709 5537755 chr3L 5538061 5538108 jockey 9 357 3.0 9.5 6.2 1.2 399 chr3L 5537709 intergenic not near genes chr3L 5537908 intergenic not near genes chr3L 5538108 intergenic CG10625 - chr3L_9_5535001 chr3L_5535001 RAL-426 1427 chr3L 5733886 5733898 chr3L 5734173 5734186 4 288 3.5 12.5 8.0 0.4 300 chr3L 5733886 intron sif + chr3L 5734036 intron sif + chr3L 5734186 intron sif + chr3L_4_5730001 chr3L_5730001 RAL-426 1428 chr3L 5788706 5788729 chr3L 5788805 5788828 4 99 2.0 5.0 3.5 0.9 122 chr3L 5788706 intergenic not near genes chr3L 5788767 intergenic not near genes chr3L 5788828 intergenic not near genes chr3L_4_5785001 chr3L_5785001 RAL-426 1429 chr3L 5826135 5826165 chr3L 5826233 5826258 7 99 5.5 8.0 6.8 0.9 123 chr3L 5826135 intron vn - chr3L 5826196 intron vn - chr3L 5826258 intron vn - chr3L_7_5825001 chr3L_5825001 RAL-426 1430 chr3L 5893877 5893910 chr3L 5893979 5894015 7 104 4.5 3.5 4.0 1.4 138 chr3L 5893877 intergenic not near genes chr3L 5893946 intergenic not near genes chr3L 5894015 intergenic not near genes chr3L_7_5890001 chr3L_5890001 RAL-426 1431 chr3L 5910027 5910057 chr3L 5910288 5910317 pogo 7 260 1.5 7.5 4.5 1.3 290 chr3L 5910027 intron CG13288 + chr3L 5910172 intron CG13288 + chr3L 5910317 intron CG13288 + chr3L_7_5910001 chr3L_5910001 RAL-426 1432 chr3L 5923487 5923502 chr3L 5923582 5923588 4 93 11.0 1.0 6.0 0.6 101 chr3L 5923487 exon CG32407 + chr3L 5923538 3` UTR CG32407 + chr3L 5923588 intergenic CG32407 +,Vap-33B + chr3L_4_5920001 chr3L_5920001 RAL-426 1433 chr3L 5923503 5923531 chr3L 5923580 5923613 4 88 4.0 1.0 2.5 1.1 110 chr3L 5923503 exon CG32407 + chr3L 5923558 3` UTR CG32407 + chr3L 5923613 intergenic CG32407 +,Vap-33B + chr3L_4_5920001 chr3L_5920001 RAL-426 1434 chr3L 5926310 5926326 chr3L 5926520 5926534 BS 4 208 5.5 5.0 5.2 0.6 224 chr3L 5926310 intron Vap-33B + chr3L 5926422 intron Vap-33B + chr3L 5926534 intron Vap-33B + chr3L_4_5925001 chr3L_5925001 RAL-426 1435 chr3L 5949426 5949443 chr3L 5949523 5949527 6 101 0.0 6.0 3.0 1.5 101 chr3L 5949426 intron CG33993 - chr3L 5949476 intron CG33993 - chr3L 5949527 intron CG33993 - chr3L_6_5945001 chr3L_5945001 RAL-426 1436 chr3L 5996384 5996423 chr3L 5996688 5996727 9 303 5.5 3.5 4.5 1.6 343 chr3L 5996384 intergenic not near genes chr3L 5996556 intergenic not near genes chr3L 5996727 intergenic PVRAP + chr3L_9_5995001 chr3L_5995001 RAL-426 1437 chr3L 6001666 6001716 chr3L 6004386 6004436 jockey 10 2720 5.5 1.0 3.2 2.4 2770 chr3L 6001666 intron PVRAP + chr3L 6003051 intron PVRAP + chr3L 6004436 intron PVRAP + chr3L_10_6000001 chr3L_6000001 RAL-426 1438 chr3L 6040348 6040359 chr3L 6042724 6042735 Doc 5 2374 8.5 4.5 6.5 0.7 2387 chr3L 6040348 intergenic Jon65Aiv + chr3L 6041542 intergenic not near genes chr3L 6042735 intergenic not near genes chr3L_5_6040001 chr3L_6040001 RAL-426 1439 chr3L 6040362 6040392 chr3L 6042723 6042768 Doc 12 2374 5.0 4.0 4.5 2.2 2406 chr3L 6040362 intergenic Jon65Aiv + chr3L 6041565 intergenic not near genes chr3L 6042768 intergenic not near genes chr3L_12_6040001 chr3L_6040001 RAL-426 1440 chr3L 6052126 6052148 chr3L 6052231 6052254 5 104 0.0 4.0 2.0 1.7 128 chr3L 6052126 intergenic Jon65Aii +,Jon65Aiii + chr3L 6052190 intergenic Jon65Aii +,Jon65Aiii + chr3L 6052254 intergenic Jon65Aii + chr3L_5_6050001 chr3L_6050001 RAL-426 1441 chr3L 6116681 6116715 chr3L 6116784 6116819 8 104 2.0 3.5 2.8 2.1 138 chr3L 6116681 intron Ets65A + chr3L 6116750 intron Ets65A + chr3L 6116819 intron Ets65A + chr3L_8_6115001 chr3L_6115001 RAL-426 1442 chr3L 6155702 6155707 chr3L 6155808 6155809 4 105 3.5 0.0 1.8 1.4 107 chr3L 6155702 intergenic CR45421 - chr3L 6155756 intergenic not near genes chr3L 6155809 intergenic not near genes chr3L_4_6155001 chr3L_6155001 RAL-426 1443 chr3L 6220900 6220909 chr3L 6230072 6230080 roo 4 9172 12.5 8.5 10.5 0.3 9180 chr3L 6220900 5` UTR pncr008:3L + chr3L 6225490 intergenic not near genes chr3L 6230080 intergenic not near genes chr3L_4_6225001 chr3L_6225001 RAL-426 1444 chr3L 6220915 6220944 chr3L 6230065 6230116 roo 5 9164 5.0 6.5 5.8 0.7 9201 chr3L 6220915 5` UTR pncr008:3L + chr3L 6225516 intergenic not near genes chr3L 6230116 intergenic not near genes chr3L_5_6225001 chr3L_6225001 RAL-426 1445 chr3L 6259370 6259400 chr3L 6261195 6261225 6 1821 24.0 22.0 23.0 0.2 1855 chr3L 6259370 3` UTR ImpL3 - chr3L 6260298 exon ImpL3 - chr3L 6261225 intron ImpL3 - chr3L_6_6260001 chr3L_6260001 RAL-426 1446 chr3L 6259251 6259290 chr3L 6261280 6261330 22 2039 41.0 32.0 36.5 0.6 2079 chr3L 6259251 3` UTR ImpL3 - chr3L 6260290 exon ImpL3 - chr3L 6261330 intron ImpL3 - chr3L_22_6260001 chr3L_6260001 RAL-426 1447 chr3L 6335010 6335036 chr3L 6335485 6335523 297 9 488 1.0 4.5 2.8 2.4 513 chr3L 6335010 intron CG13300 - chr3L 6335266 intron CG13300 - chr3L 6335523 intron CG13300 - chr3L_9_6335001 chr3L_6335001 RAL-426 1448 chr3L 6362365 6362397 chr3L 6362462 6362489 5 96 2.5 0.5 1.5 2.0 124 chr3L 6362365 intergenic not near genes chr3L 6362427 intergenic not near genes chr3L 6362489 intergenic not near genes chr3L_5_6360001 chr3L_6360001 RAL-426 1449 chr3L 6371431 6371434 chr3L 6371522 6371533 4 97 3.0 0.5 1.8 1.4 102 chr3L 6371431 intergenic not near genes chr3L 6371482 intergenic not near genes chr3L 6371533 intergenic not near genes chr3L_4_6370001 chr3L_6370001 RAL-426 1450 chr3L 6482677 6482694 chr3L 6482751 6482774 5 84 2.0 7.0 4.5 0.9 97 chr3L 6482677 intron CG42747 + chr3L 6482726 intron CG42747 + chr3L 6482774 intron CG42747 + chr3L_5_6480001 chr3L_6480001 RAL-426 1451 chr3L 6642848 6642877 chr3L 6642948 6642977 7 100 3.0 0.0 1.5 2.8 129 chr3L 6642848 intergenic CR45239 + chr3L 6642912 intergenic CR45239 + chr3L 6642977 intergenic CR45239 + chr3L_7_6640001 chr3L_6640001 RAL-426 1452 chr3L 6650274 6650281 chr3L 6650372 6650379 4 98 12.5 5.5 9.0 0.4 105 chr3L 6650274 intergenic not near genes chr3L 6650326 intergenic not near genes chr3L 6650379 intergenic not near genes chr3L_4_6650001 chr3L_6650001 RAL-426 1453 chr3L 6650283 6650322 chr3L 6650366 6650420 23 89 2.0 3.5 2.8 6.1 137 chr3L 6650283 intergenic not near genes chr3L 6650352 intergenic not near genes chr3L 6650420 intergenic not near genes chr3L_23_6650001 chr3L_6650001 RAL-426 1454 chr3L 6659308 6659352 chr3L 6659405 6659449 11 94 1.5 2.0 1.8 3.9 141 chr3L 6659308 intergenic not near genes chr3L 6659378 intergenic not near genes chr3L 6659449 intergenic not near genes chr3L_11_6655001 chr3L_6655001 RAL-426 1455 chr3L 6723685 6723706 chr3L 6723802 6723823 12 116 8.5 4.5 6.5 1.6 138 chr3L 6723685 intergenic not near genes chr3L 6723754 intergenic not near genes chr3L 6723823 intergenic not near genes chr3L_12_6720001 chr3L_6720001 RAL-426 1456 chr3L 6767530 6767582 chr3L 6767635 6767687 13 104 4.0 3.5 3.8 2.7 157 chr3L 6767530 intergenic not near genes chr3L 6767608 intergenic not near genes chr3L 6767687 intergenic not near genes chr3L_13_6765001 chr3L_6765001 RAL-426 1457 chr3L 6855912 6855949 chr3L 6860716 6860722 Doc 8 4794 3.0 5.0 4.0 1.6 4810 chr3L 6855912 intergenic not near genes chr3L 6858317 intergenic not near genes chr3L 6860722 intergenic not near genes chr3L_8_6855001 chr3L_6855001 RAL-426 1458 chr3L 6887495 6887535 chr3L 6895007 6895047 roo 6 7511 4.0 0.5 2.2 1.9 7552 chr3L 6887495 intergenic not near genes chr3L 6891271 intergenic not near genes chr3L 6895047 intergenic not near genes chr3L_6_6890001 chr3L_6890001 RAL-426 1459 chr3L 6900857 6900907 chr3L 6900953 6901003 7 95 0.5 4.5 2.5 2.0 146 chr3L 6900857 intergenic not near genes chr3L 6900930 intergenic not near genes chr3L 6901003 intergenic not near genes chr3L_7_6900001 chr3L_6900001 RAL-426 1460 chr3L 6907995 6908047 chr3L 6908099 6908134 8 98 3.0 0.0 1.5 3.2 139 chr3L 6907995 intergenic not near genes chr3L 6908064 intergenic not near genes chr3L 6908134 intergenic not near genes chr3L_8_6905001 chr3L_6905001 RAL-426 1461 chr3L 7023392 7023421 chr3L 7023504 7023530 4 112 5.0 4.5 4.8 0.7 138 chr3L 7023392 intron Mp + chr3L 7023461 intron Mp + chr3L 7023530 intron Mp + chr3L_4_7020001 chr3L_7020001 RAL-426 1462 chr3L 7033155 7033173 chr3L 7033255 7033264 6 97 5.5 5.0 5.2 1.0 109 chr3L 7033155 intron Mp + chr3L 7033210 intron Mp + chr3L 7033264 intron Mp + chr3L_6_7030001 chr3L_7030001 RAL-426 1463 chr3L 7033177 7033197 chr3L 7033251 7033272 6 82 3.5 4.5 4.0 1.2 95 chr3L 7033177 intron Mp + chr3L 7033224 intron Mp + chr3L 7033272 intron Mp + chr3L_6_7030001 chr3L_7030001 RAL-426 1464 chr3L 7041904 7041921 chr3L 7042000 7042017 8 95 3.5 5.5 4.5 1.5 113 chr3L 7041904 intron Mp + chr3L 7041960 intron Mp + chr3L 7042017 intron Mp + chr3L_8_7040001 chr3L_7040001 RAL-426 1465 chr3L 7079592 7079634 chr3L 7079689 7079722 14 95 6.0 3.0 4.5 2.5 130 chr3L 7079592 intergenic not near genes chr3L 7079657 intergenic not near genes chr3L 7079722 intergenic not near genes chr3L_14_7075001 chr3L_7075001 RAL-426 1466 chr3L 7090878 7090922 chr3L 7090980 7091026 8 99 2.5 3.5 3.0 2.0 148 chr3L 7090878 intergenic not near genes chr3L 7090952 intergenic not near genes chr3L 7091026 intergenic not near genes chr3L_8_7090001 chr3L_7090001 RAL-426 1467 chr3L 7112581 7112609 chr3L 7112681 7112716 10 105 3.5 6.0 4.8 1.7 135 chr3L 7112581 intron form3 + chr3L 7112648 intron form3 + chr3L 7112716 intron form3 + chr3L_10_7110001 chr3L_7110001 RAL-426 1468 chr3L 7150869 7150882 chr3L 7150965 7150969 6 94 4.5 3.5 4.0 1.2 100 chr3L 7150869 intron corn - chr3L 7150919 intron corn - chr3L 7150969 intron corn - chr3L_6_7150001 chr3L_7150001 RAL-426 1469 chr3L 7150887 7150899 chr3L 7150960 7150995 5 91 2.0 2.5 2.2 1.6 108 chr3L 7150887 intron corn - chr3L 7150941 intron corn - chr3L 7150995 intron corn - chr3L_5_7150001 chr3L_7150001 RAL-426 1470 chr3L 7175016 7175061 chr3L 7175266 7175301 13 247 2.0 3.0 2.5 3.7 285 chr3L 7175016 intron Dscam2 - chr3L 7175158 intron Dscam2 - chr3L 7175301 intron Dscam2 - chr3L_13_7175001 chr3L_7175001 RAL-426 1471 chr3L 7218080 7218095 chr3L 7218173 7218193 4 93 4.5 6.5 5.5 0.6 113 chr3L 7218080 intergenic not near genes chr3L 7218136 intergenic not near genes chr3L 7218193 intergenic not near genes chr3L_4_7215001 chr3L_7215001 RAL-426 1472 chr3L 7218096 7218110 chr3L 7218167 7218208 5 85 2.5 6.0 4.2 1.0 112 chr3L 7218096 intergenic not near genes chr3L 7218152 intergenic not near genes chr3L 7218208 intergenic not near genes chr3L_5_7215001 chr3L_7215001 RAL-426 1473 chr3L 7244920 7244951 chr3L 7245022 7245047 6 92 8.0 3.0 5.5 0.9 127 chr3L 7244920 exon mei-P22 + chr3L 7244984 exon mei-P22 + chr3L 7245047 exon mei-P22 + chr3L_6_7240001 chr3L_7240001 RAL-426 1474 chr3L 7244952 7244962 chr3L 7245021 7245051 4 85 6.5 3.0 4.8 0.7 99 chr3L 7244952 exon mei-P22 + chr3L 7245002 exon mei-P22 + chr3L 7245051 exon mei-P22 + chr3L_4_7240001 chr3L_7240001 RAL-426 1475 chr3L 7258985 7259033 chr3L 7259124 7259171 12 136 1.5 4.0 2.8 3.2 186 chr3L 7258985 intron CG14830 - chr3L 7259078 intron CG14830 - chr3L 7259171 intron CG14830 - chr3L_12_7255001 chr3L_7255001 RAL-426 1476 chr3L 7264869 7264884 chr3L 7264972 7264987 4 103 0.0 2.5 1.2 1.8 118 chr3L 7264869 intergenic not near genes chr3L 7264928 intergenic not near genes chr3L 7264987 intergenic not near genes chr3L_4_7260001 chr3L_7260001 RAL-426 1477 chr3L 7308186 7308220 chr3L 7308263 7308316 14 92 3.0 6.5 4.8 2.4 130 chr3L 7308186 intron unc-13-4A - chr3L 7308251 intron unc-13-4A - chr3L 7308316 intron unc-13-4A - chr3L_14_7305001 chr3L_7305001 RAL-426 1478 chr3L 7318181 7318215 chr3L 7318280 7318322 15 106 5.5 2.5 4.0 3.0 141 chr3L 7318181 intergenic not near genes chr3L 7318252 intergenic not near genes chr3L 7318322 intergenic not near genes chr3L_15_7315001 chr3L_7315001 RAL-426 1479 chr3L 7328998 7329025 chr3L 7329105 7329132 4 107 0.0 2.5 1.2 1.8 134 chr3L 7328998 intergenic CG42307 +,mus312 +,CG8602 - chr3L 7329065 intergenic CG42307 +,mus312 +,CG8602 - chr3L 7329132 5` UTR,5` UTR CG42307 +,mus312 + chr3L_4_7325001 chr3L_7325001 RAL-426 1480 chr3L 7371160 7371210 chr3L 7371260 7371291 7 97 0.0 5.5 2.8 1.8 131 chr3L 7371160 intron akirin + chr3L 7371226 intron akirin + chr3L 7371291 intron akirin + chr3L_7_7370001 chr3L_7370001 RAL-426 1481 chr3L 7375908 7375944 chr3L 7376004 7376039 6 95 8.5 2.0 5.2 1.0 131 chr3L 7375908 exon SMSr - chr3L 7375974 intron SMSr - chr3L 7376039 intron SMSr - chr3L_6_7375001 chr3L_7375001 RAL-426 1482 chr3L 7377299 7377348 chr3L 7380423 7380473 297 12 3123 2.0 4.0 3.0 3.0 3174 chr3L 7377299 intron SMSr - chr3L 7378886 intron SMSr - chr3L 7380473 intron SMSr - chr3L_12_7375001 chr3L_7375001 RAL-426 1483 chr3L 7436122 7436144 chr3L 7436220 7436227 4 94 4.5 4.5 4.5 0.7 105 chr3L 7436122 intron CG42458 + chr3L 7436174 intron CG42458 + chr3L 7436227 intron CG42458 + chr3L_4_7435001 chr3L_7435001 RAL-426 1484 chr3L 7460361 7460398 chr3L 7460457 7460502 11 97 1.5 3.0 2.2 3.4 141 chr3L 7460361 intergenic not near genes chr3L 7460432 intergenic not near genes chr3L 7460502 intergenic not near genes chr3L_11_7460001 chr3L_7460001 RAL-426 1485 chr3L 7462979 7462991 chr3L 7463078 7463089 4 99 0.5 5.0 2.8 1.1 110 chr3L 7462979 intergenic not near genes chr3L 7463034 intergenic not near genes chr3L 7463089 intergenic not near genes chr3L_4_7460001 chr3L_7460001 RAL-426 1486 chr3L 7480037 7480069 chr3L 7480145 7480176 9 108 4.5 2.0 3.2 2.1 139 chr3L 7480037 intergenic not near genes chr3L 7480106 intergenic not near genes chr3L 7480176 intergenic not near genes chr3L_9_7480001 chr3L_7480001 RAL-426 1487 chr3L 7505407 7505442 chr3L 7505499 7505499 7 89 0.0 3.0 1.5 2.8 92 chr3L 7505407 intergenic CG7548 - chr3L 7505453 intergenic CG7548 - chr3L 7505499 intergenic CG7548 - chr3L_7_7505001 chr3L_7505001 RAL-426 1488 chr3L 7524132 7524169 chr3L 7524229 7524271 5 100 3.0 0.0 1.5 2.0 139 chr3L 7524132 intron ltl + chr3L 7524202 intron ltl + chr3L 7524271 intron ltl + chr3L_5_7520001 chr3L_7520001 RAL-426 1489 chr3L 7576194 7576245 chr3L 7576302 7576326 16 106 1.5 4.0 2.8 4.2 132 chr3L 7576194 intergenic not near genes chr3L 7576260 intergenic not near genes chr3L 7576326 intergenic not near genes chr3L_16_7575001 chr3L_7575001 RAL-426 1490 chr3L 7581630 7581655 chr3L 7581714 7581742 8 95 1.5 5.5 3.5 1.8 112 chr3L 7581630 intergenic not near genes chr3L 7581686 intergenic not near genes chr3L 7581742 intergenic not near genes chr3L_8_7580001 chr3L_7580001 RAL-426 1491 chr3L 7749470 7749472 chr3L 11777678 11777678 8 4028207 11.5 7.5 9.5 0.8 4028208 chr3L 7749470 intron,3` UTR CG32373 +,CG13685 + chr3L 9763574 5` UTR CG8177 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_8_9760001 chr3L_9760001 RAL-426 1492 chr3L 7783769 7783809 chr3L 7783866 7783901 7 95 4.0 3.5 3.8 1.5 132 chr3L 7783769 intron CG32369 - chr3L 7783835 intron CG32369 - chr3L 7783901 intron CG32369 - chr3L_7_7780001 chr3L_7780001 RAL-426 1493 chr3L 7787471 7787489 chr3L 7787567 7787601 8 110 5.0 2.5 3.8 1.7 130 chr3L 7787471 intron CG32369 - chr3L 7787536 intron CG32369 - chr3L 7787601 intron CG32369 - chr3L_8_7785001 chr3L_7785001 RAL-426 1494 chr3L 7793720 7793735 chr3L 7800792 7800807 297 7 7071 7.0 12.5 9.8 0.6 7087 chr3L 7793720 intron CG32369 - chr3L 7797264 intron CG32369 - chr3L 7800807 intron CG32369 - chr3L_7_7795001 chr3L_7795001 RAL-426 1495 chr3L 7801317 7801351 chr3L 7801430 7801463 15 106 3.5 4.0 3.8 3.1 146 chr3L 7801317 intron CG32369 - chr3L 7801390 intron CG32369 - chr3L 7801463 intron CG32369 - chr3L_15_7800001 chr3L_7800001 RAL-426 1496 chr3L 7886491 7886546 chr3L 7889029 7889079 Stalker4 8 2533 0.0 2.0 1.0 4.0 2588 chr3L 7886491 intron CG32365 + chr3L 7887785 intron CG32365 + chr3L 7889079 intron CG32365 + chr3L_8_7885001 chr3L_7885001 RAL-426 1497 chr3L 7915981 7916120 chr3L 7916111 7916299 14 156 0.0 0.0 0.0 14.0 318 chr3L 7915981 intergenic CG32368 + chr3L 7916140 intergenic CG32368 + chr3L 7916299 intergenic syd -,CG32368 + chr3L_14_7915001 chr3L_7915001 RAL-426 1498 chr3L 7960015 7960062 chr3L 7960120 7960167 11 98 3.0 2.0 2.5 3.1 152 chr3L 7960015 intergenic not near genes chr3L 7960091 intergenic not near genes chr3L 7960167 intergenic not near genes chr3L_11_7960001 chr3L_7960001 RAL-426 1499 chr3L 7985352 7985360 chr3L 7987700 7987707 NOF 4 2347 10.0 4.5 7.2 0.5 2355 chr3L 7985352 intron nmo + chr3L 7986530 intron nmo + chr3L 7987707 intron nmo + chr3L_4_7985001 chr3L_7985001 RAL-426 1500 chr3L 7985367 7985395 chr3L 7987696 7987743 NOF 13 2346 4.5 3.5 4.0 2.6 2376 chr3L 7985367 intron nmo + chr3L 7986555 intron nmo + chr3L 7987743 intron nmo + chr3L_13_7985001 chr3L_7985001 RAL-426 1501 chr3L 8019705 8019732 chr3L 8024117 8024143 NOF 5 4420 4.5 5.0 4.8 0.9 4438 chr3L 8019705 intron nmo + chr3L 8021924 intron nmo + chr3L 8024143 intron nmo + chr3L_5_8020001 chr3L_8020001 RAL-426 1502 chr3L 8026579 8026608 chr3L 8026677 8026705 4 94 3.5 0.0 1.8 1.4 126 chr3L 8026579 intron nmo + chr3L 8026642 intron nmo + chr3L 8026705 intron nmo + chr3L_4_8025001 chr3L_8025001 RAL-426 1503 chr3L 8149746 8149775 chr3L 8149872 8149895 6 125 1.5 2.5 2.0 2.0 149 chr3L 8149746 intron CG13676 - chr3L 8149820 intron CG13676 - chr3L 8149895 intron CG13676 - chr3L_6_8145001 chr3L_8145001 RAL-426 1504 chr3L 8243813 8243839 chr3L 8243915 8243941 6 100 3.0 6.5 4.8 1.0 128 chr3L 8243813 intron Dscam4 + chr3L 8243877 intron Dscam4 + chr3L 8243941 intron Dscam4 + chr3L_6_8240001 chr3L_8240001 RAL-426 1505 chr3L 8295776 8295824 chr3L 8295954 8296002 14 175 4.5 7.0 5.8 2.1 226 chr3L 8295776 intergenic CG7201 - chr3L 8295889 intergenic not near genes chr3L 8296002 intergenic not near genes chr3L_14_8295001 chr3L_8295001 RAL-426 1506 chr3L 8331634 8331666 chr3L 8331886 8331916 5 257 1.5 3.5 2.5 1.4 282 chr3L 8331634 intergenic not near genes chr3L 8331775 intergenic not near genes chr3L 8331916 intergenic not near genes chr3L_5_8330001 chr3L_8330001 RAL-426 1507 chr3L 8443559 8443578 chr3L 8443659 8443676 10 99 2.0 3.0 2.5 2.9 117 chr3L 8443559 3` UTR CG6983 - chr3L 8443618 3` UTR CG6983 - chr3L 8443676 3` UTR CG6983 - chr3L_10_8440001 chr3L_8440001 RAL-426 1508 chr3L 8606763 8606801 chr3L 8607219 8607259 12 455 3.5 7.0 5.2 1.9 496 chr3L 8606763 intron CG6282 + chr3L 8607011 intron CG6282 + chr3L 8607259 intron CG6282 + chr3L_12_8605001 chr3L_8605001 RAL-426 1509 chr3L 8627136 8627144 chr3L 8627248 8627256 4 112 0.0 0.0 0.0 4.0 120 chr3L 8627136 intron Zasp66 + chr3L 8627196 intron Zasp66 + chr3L 8627256 intron Zasp66 + chr3L_4_8625001 chr3L_8625001 RAL-426 1510 chr3L 8752400 8752418 chr3L 8752607 8752609 7 204 7.0 5.0 6.0 1.0 209 chr3L 8752400 intergenic not near genes chr3L 8752504 intergenic not near genes chr3L 8752609 intergenic not near genes chr3L_7_8750001 chr3L_8750001 RAL-426 1511 chr3L 8772044 8772086 chr3L 8772142 8772184 7 98 4.0 7.5 5.8 1.0 140 chr3L 8772044 intron Fhos + chr3L 8772114 intron Fhos + chr3L 8772184 intron Fhos + chr3L_7_8770001 chr3L_8770001 RAL-426 1512 chr3L 8791259 8791297 chr3L 8796699 8796737 I-element 12 5439 5.0 3.5 4.2 2.3 5478 chr3L 8791259 exon Fhos + chr3L 8793998 intron Fhos + chr3L 8796737 intron Fhos + chr3L_12_8790001 chr3L_8790001 RAL-426 1513 chr3L 8861519 8861537 chr3L 8861630 8861648 4 110 4.0 4.0 4.0 0.8 129 chr3L 8861519 intron dally + chr3L 8861584 intron dally + chr3L 8861648 intron dally + chr3L_4_8860001 chr3L_8860001 RAL-426 1514 chr3L 8884387 8884424 chr3L 8884604 8884627 4 210 5.5 1.0 3.2 1.0 240 chr3L 8884387 intron dally + chr3L 8884507 intron dally + chr3L 8884627 intron dally + chr3L_4_8880001 chr3L_8880001 RAL-426 1515 chr3L 9076906 9076956 chr3L 9084486 9084508 412 14 7572 4.0 4.5 4.2 2.7 7602 chr3L 9076906 exon Tequila + chr3L 9080707 intron Tequila + chr3L 9084508 exon Tequila + chr3L_14_9080001 chr3L_9080001 RAL-426 1516 chr3L 9111131 9111177 chr3L 9111226 9111271 8 94 3.0 2.5 2.8 2.1 140 chr3L 9111131 intron bol - chr3L 9111201 intron bol - chr3L 9111271 intron bol - chr3L_8_9110001 chr3L_9110001 RAL-426 1517 chr3L 9115234 9115262 chr3L 9115337 9115353 8 101 5.0 2.5 3.8 1.7 119 chr3L 9115234 intron bol - chr3L 9115294 intron bol - chr3L 9115353 intron bol - chr3L_8_9115001 chr3L_9115001 RAL-426 1518 chr3L 9130542 9130582 chr3L 9134318 9134358 412 11 3775 6.0 4.5 5.2 1.8 3816 chr3L 9130542 intergenic bol - chr3L 9132450 intergenic not near genes chr3L 9134358 intergenic Dhpr + chr3L_11_9130001 chr3L_9130001 RAL-426 1519 chr3L 9164678 9164712 chr3L 9166165 9166198 hobo 11 1486 8.5 2.5 5.5 1.7 1520 chr3L 9164678 intron Rdl - chr3L 9165438 intron Rdl - chr3L 9166198 intron Rdl - chr3L_11_9165001 chr3L_9165001 RAL-426 1520 chr3L 9194128 9194172 chr3L 9194263 9194307 11 134 1.0 1.5 1.2 5.0 179 chr3L 9194128 intergenic not near genes chr3L 9194218 intergenic not near genes chr3L 9194307 intergenic not near genes chr3L_11_9190001 chr3L_9190001 RAL-426 1521 chr3L 9213222 9213237 chr3L 9213322 9213337 6 100 6.0 3.5 4.8 1.0 115 chr3L 9213222 intron CG4476 + chr3L 9213280 intron CG4476 + chr3L 9213337 intron CG4476 + chr3L_6_9210001 chr3L_9210001 RAL-426 1522 chr3L 9219232 9219255 chr3L 9219915 9219917 jockey 11 683 7.5 6.0 6.8 1.4 685 chr3L 9219232 intergenic not near genes chr3L 9219574 intergenic not near genes chr3L 9219917 intergenic not near genes chr3L_11_9215001 chr3L_9215001 RAL-426 1523 chr3L 9219256 9219266 chr3L 9219913 9219947 jockey 5 679 6.5 5.5 6.0 0.7 691 chr3L 9219256 intergenic not near genes chr3L 9219602 intergenic not near genes chr3L 9219947 intergenic not near genes chr3L_5_9215001 chr3L_9215001 RAL-426 1524 chr3L 9219267 9219273 chr3L 9219911 9219956 jockey 7 665 6.0 5.0 5.5 1.1 689 chr3L 9219267 intergenic not near genes chr3L 9219612 intergenic not near genes chr3L 9219956 intergenic not near genes chr3L_7_9215001 chr3L_9215001 RAL-426 1525 chr3L 9232855 9232874 chr3L 9232931 9232970 6 88 2.5 1.5 2.0 2.0 115 chr3L 9232855 intergenic not near genes chr3L 9232912 intergenic not near genes chr3L 9232970 intergenic not near genes chr3L_6_9230001 chr3L_9230001 RAL-426 1526 chr3L 9234525 9234546 chr3L 9234753 9234776 4 230 4.0 8.0 6.0 0.6 251 chr3L 9234525 intergenic not near genes chr3L 9234650 intergenic CG4483 - chr3L 9234776 intergenic CG4483 - chr3L_4_9230001 chr3L_9230001 RAL-426 1527 chr3L 9234547 9234552 chr3L 9234752 9234783 4 224 4.0 7.5 5.8 0.6 236 chr3L 9234547 intergenic not near genes chr3L 9234665 intergenic CG4483 - chr3L 9234783 intergenic CG4483 - chr3L_4_9230001 chr3L_9230001 RAL-426 1528 chr3L 9290033 9290066 chr3L 9290128 9290139 16 93 1.0 0.0 0.5 10.7 106 chr3L 9290033 intergenic not near genes chr3L 9290086 intergenic not near genes chr3L 9290139 intergenic not near genes chr3L_16_9290001 chr3L_9290001 RAL-426 1529 chr3L 9307796 9307796 chr3L 22908066 22908067 4 13600270 20.5 26.0 23.2 0.2 13600271 chr3L 9307796 intergenic not near genes chr3L 16107932 intron Zn72D - chr3L 22908067 intergenic not near genes chr3L_4_16105001 chr3L_16105001 RAL-426 1530 chr3L 9443494 9443541 chr3L 9445305 9445342 S-element 14 1809 1.0 5.5 3.2 3.3 1848 chr3L 9443494 intron CG33926 + chr3L 9444418 intron CG33926 + chr3L 9445342 intron CG33926 + chr3L_14_9440001 chr3L_9440001 RAL-426 1531 chr3L 9501686 9501732 chr3L 9502187 9502235 roo 8 502 4.5 1.0 2.8 2.1 549 chr3L 9501686 intron path - chr3L 9501960 intron path - chr3L 9502235 intron path - chr3L_8_9500001 chr3L_9500001 RAL-426 1532 chr3L 9502600 9502644 chr3L 9502699 9502738 8 98 1.5 5.0 3.2 1.9 138 chr3L 9502600 intron path - chr3L 9502669 intron path - chr3L 9502738 intron path - chr3L_8_9500001 chr3L_9500001 RAL-426 1533 chr3L 9503445 9503462 chr3L 9503552 9503571 7 108 4.5 6.0 5.2 1.1 126 chr3L 9503445 intron path - chr3L 9503508 intron path - chr3L 9503571 intron path - chr3L_7_9500001 chr3L_9500001 RAL-426 1534 chr3L 9510891 9510956 chr3L 9511004 9511055 13 105 0.0 2.0 1.0 6.5 164 chr3L 9510891 intron RpS9 - chr3L 9510973 intron RpS9 - chr3L 9511055 exon RpS9 - chr3L_13_9510001 chr3L_9510001 RAL-426 1535 chr3L 9561331 9561346 chr3L 9561429 9561443 4 97 3.0 3.0 3.0 1.0 112 chr3L 9561331 intron CG42673 + chr3L 9561387 intron CG42673 + chr3L 9561443 intron CG42673 + chr3L_4_9560001 chr3L_9560001 RAL-426 1536 chr3L 9571882 9571934 chr3L 9572249 9572302 jockey 12 365 4.0 3.0 3.5 2.7 420 chr3L 9571882 intron CG42673 + chr3L 9572092 intron CG42673 + chr3L 9572302 intron CG42673 + chr3L_12_9570001 chr3L_9570001 RAL-426 1537 chr3L 9575892 9575946 chr3L 9580989 9580998 jockey 22 5085 4.5 4.0 4.2 4.2 5106 chr3L 9575892 intron CG42673 + chr3L 9578445 intron CG42673 + chr3L 9580998 intron CG42673 + chr3L_22_9575001 chr3L_9575001 RAL-426 1538 chr3L 9600325 9600374 chr3L 9600444 9600498 6 122 3.5 0.0 1.8 2.1 173 chr3L 9600325 3` UTR CG3222 + chr3L 9600412 intergenic CG3222 +,CG3088 - chr3L 9600498 3` UTR CG3088 - chr3L_6_9600001 chr3L_9600001 RAL-426 1539 chr3L 9715588 9715623 chr3L 9715684 9715720 4 92 4.0 3.5 3.8 0.8 132 chr3L 9715588 intron vsg + chr3L 9715654 intron vsg + chr3L 9715720 intron vsg + chr3L_4_9715001 chr3L_9715001 RAL-426 1540 chr3L 9753620 9753662 chr3L 9754342 9754379 6 716 0.0 3.0 1.5 2.4 759 chr3L 9753620 intron CG42268 - chr3L 9754000 intron CG42268 - chr3L 9754379 intron CG42268 - chr3L_6_9750001 chr3L_9750001 RAL-426 1541 chr3L 9824133 9824175 chr3L 9824232 9824266 8 98 3.5 0.0 1.8 2.9 133 chr3L 9824133 intron CG43897 + chr3L 9824200 intron CG43897 + chr3L 9824266 intron CG43897 + chr3L_8_9820001 chr3L_9820001 RAL-426 1542 chr3L 9829033 9829046 chr3L 9829135 9829147 4 102 7.5 5.0 6.2 0.6 114 chr3L 9829033 intron CG43897 + chr3L 9829090 intron CG43897 + chr3L 9829147 intron CG43897 + chr3L_4_9825001 chr3L_9825001 RAL-426 1543 chr3L 9829048 9829081 chr3L 9829130 9829183 10 95 1.0 4.5 2.8 2.6 135 chr3L 9829048 intron CG43897 + chr3L 9829116 intron CG43897 + chr3L 9829183 intron CG43897 + chr3L_10_9825001 chr3L_9825001 RAL-426 1544 chr3L 9907887 9907894 chr3L 9907961 9907976 4 80 5.0 4.5 4.8 0.7 89 chr3L 9907887 intergenic CG34356 + chr3L 9907932 intergenic CG34356 + chr3L 9907976 intergenic CG34356 + chr3L_4_9905001 chr3L_9905001 RAL-426 1545 chr3L 9924911 9924959 chr3L 9925016 9925053 6 100 1.5 4.0 2.8 1.6 142 chr3L 9924911 intron CG34356 + chr3L 9924982 intron CG34356 + chr3L 9925053 intron CG34356 + chr3L_6_9920001 chr3L_9920001 RAL-426 1546 chr3L 9929664 9929697 chr3L 9938452 9938495 roo 9 8793 4.0 6.5 5.2 1.5 8831 chr3L 9929664 intron CG34356 + chr3L 9934080 intron CG34356 + chr3L 9938495 intron CG34356 + chr3L_9_9930001 chr3L_9930001 RAL-426 1547 chr3L 9951174 9951232 chr3L 9951281 9951316 17 96 3.5 1.5 2.5 4.9 142 chr3L 9951174 intron CG34356 + chr3L 9951245 intron CG34356 + chr3L 9951316 intron CG34356 + chr3L_17_9950001 chr3L_9950001 RAL-426 1548 chr3L 9976976 9976990 chr3L 9977074 9977086 6 98 0.0 5.5 2.8 1.6 110 chr3L 9976976 intron dpr6 + chr3L 9977031 intron dpr6 + chr3L 9977086 intron dpr6 + chr3L_6_9975001 chr3L_9975001 RAL-426 1549 chr3L 10011572 10011619 chr3L 10011674 10011712 14 97 5.0 3.0 4.0 2.8 140 chr3L 10011572 intron dpr6 + chr3L 10011642 intron dpr6 + chr3L 10011712 intron dpr6 + chr3L_14_10010001 chr3L_10010001 RAL-426 1550 chr3L 10043264 10043298 chr3L 10043417 10043451 6 153 0.0 3.5 1.8 2.1 187 chr3L 10043264 intron dpr6 + chr3L 10043358 intron dpr6 + chr3L 10043451 intron dpr6 + chr3L_6_10040001 chr3L_10040001 RAL-426 1551 chr3L 10057101 10057117 chr3L 10057230 10057246 5 128 3.5 4.0 3.8 1.0 145 chr3L 10057101 intron dpr6 + chr3L 10057174 intron dpr6 + chr3L 10057246 intron dpr6 + chr3L_5_10055001 chr3L_10055001 RAL-426 1552 chr3L 10060098 10060114 chr3L 10067697 10067713 17.6 4 7599 10.0 5.0 7.5 0.5 7615 chr3L 10060098 intron dpr6 + chr3L 10063906 intron dpr6 + chr3L 10067713 intron dpr6 + chr3L_4_10060001 chr3L_10060001 RAL-426 1553 chr3L 10099141 10099181 chr3L 10099269 10099314 10 132 0.0 2.0 1.0 5.0 173 chr3L 10099141 intron dpr6 + chr3L 10099228 intron dpr6 + chr3L 10099314 intron dpr6 + chr3L_10_10095001 chr3L_10095001 RAL-426 1554 chr3L 10182163 10182166 chr3L 10184719 10184749 12 2561 27.5 27.5 27.5 0.4 2586 chr3L 10182163 intron dpr10 - chr3L 10183456 intron dpr10 - chr3L 10184749 intron dpr10 - chr3L_12_10180001 chr3L_10180001 RAL-426 1555 chr3L 10191268 10191314 chr3L 10191398 10191445 17 129 3.0 3.5 3.2 4.0 177 chr3L 10191268 exon ect - chr3L 10191356 intron ect - chr3L 10191445 intron ect - chr3L_17_10190001 chr3L_10190001 RAL-426 1556 chr3L 10214717 10214828 chr3L 10214823 10214950 10 124 0.0 0.0 0.0 10.0 233 chr3L 10214717 intergenic not near genes chr3L 10214834 intergenic not near genes chr3L 10214950 intergenic not near genes chr3L_10_10210001 chr3L_10210001 RAL-426 1557 chr3L 10222758 10222773 chr3L 10222855 10222869 5 96 1.5 12.5 7.0 0.6 111 chr3L 10222758 intron scramb1 - chr3L 10222814 intron scramb1 - chr3L 10222869 intron scramb1 - chr3L_5_10220001 chr3L_10220001 RAL-426 1558 chr3L 10251052 10251103 chr3L 10251150 10251200 8 98 2.5 1.5 2.0 2.7 148 chr3L 10251052 intergenic not near genes chr3L 10251126 intergenic not near genes chr3L 10251200 intergenic not near genes chr3L_8_10250001 chr3L_10250001 RAL-426 1559 chr3L 10255366 10255404 chr3L 10255484 10255521 11 117 0.0 1.5 0.8 6.1 155 chr3L 10255366 intergenic not near genes chr3L 10255444 intergenic not near genes chr3L 10255521 intergenic not near genes chr3L_11_10255001 chr3L_10255001 RAL-426 1560 chr3L 10298659 10298694 chr3L 10298754 10298801 7 103 0.5 3.0 1.8 2.5 142 chr3L 10298659 intergenic not near genes chr3L 10298730 intergenic not near genes chr3L 10298801 intergenic not near genes chr3L_7_10295001 chr3L_10295001 RAL-426 1561 chr3L 10308728 10308737 chr3L 10308822 10308829 4 95 4.5 8.0 6.2 0.6 101 chr3L 10308728 intergenic not near genes chr3L 10308778 intergenic not near genes chr3L 10308829 intergenic not near genes chr3L_4_10305001 chr3L_10305001 RAL-426 1562 chr3L 10308738 10308762 chr3L 10308817 10308858 9 94 3.0 7.0 5.0 1.5 120 chr3L 10308738 intergenic not near genes chr3L 10308798 intergenic not near genes chr3L 10308858 intergenic not near genes chr3L_9_10305001 chr3L_10305001 RAL-426 1563 chr3L 10381315 10381354 chr3L 10381397 10381453 6 96 3.0 0.0 1.5 2.4 138 chr3L 10381315 intergenic not near genes chr3L 10381384 intergenic not near genes chr3L 10381453 intergenic not near genes chr3L_6_10380001 chr3L_10380001 RAL-426 1564 chr3L 10417570 10417583 chr3L 10417650 10417680 5 87 9.0 2.5 5.8 0.7 110 chr3L 10417570 intergenic not near genes chr3L 10417625 intergenic not near genes chr3L 10417680 intergenic not near genes chr3L_5_10415001 chr3L_10415001 RAL-426 1565 chr3L 10417586 10417602 chr3L 10417646 10417674 6 77 6.5 2.5 4.5 1.1 88 chr3L 10417586 intergenic not near genes chr3L 10417630 intergenic not near genes chr3L 10417674 intergenic not near genes chr3L_6_10415001 chr3L_10415001 RAL-426 1566 chr3L 10455997 10456032 chr3L 10456210 10456245 6 209 3.0 4.5 3.8 1.2 248 chr3L 10455997 intergenic not near genes chr3L 10456121 intergenic not near genes chr3L 10456245 intergenic not near genes chr3L_6_10455001 chr3L_10455001 RAL-426 1567 chr3L 10456722 10456753 chr3L 10456833 10456864 10 109 0.5 0.5 0.5 6.7 142 chr3L 10456722 intergenic not near genes chr3L 10456793 intergenic not near genes chr3L 10456864 intergenic not near genes chr3L_10_10455001 chr3L_10455001 RAL-426 1568 chr3L 10469918 10469931 chr3L 10470013 10470026 5 95 6.0 2.0 4.0 1.0 108 chr3L 10469918 intergenic not near genes chr3L 10469972 intergenic not near genes chr3L 10470026 intergenic not near genes chr3L_5_10465001 chr3L_10465001 RAL-426 1569 chr3L 10469932 10469963 chr3L 10470010 10470059 4 90 1.5 2.0 1.8 1.4 127 chr3L 10469932 intergenic not near genes chr3L 10469996 intergenic not near genes chr3L 10470059 intergenic not near genes chr3L_4_10465001 chr3L_10465001 RAL-426 1570 chr3L 10476558 10476608 chr3L 10476665 10476716 9 99 5.5 4.5 5.0 1.5 158 chr3L 10476558 intergenic not near genes chr3L 10476637 intergenic not near genes chr3L 10476716 intergenic not near genes chr3L_9_10475001 chr3L_10475001 RAL-426 1571 chr3L 10502024 10502064 chr3L 10502139 10502150 5 110 1.5 1.0 1.2 2.3 126 chr3L 10502024 intron A2bp1 + chr3L 10502087 intron A2bp1 + chr3L 10502150 intron A2bp1 + chr3L_5_10500001 chr3L_10500001 RAL-426 1572 chr3L 10509471 10509490 chr3L 10509620 10509638 6 149 5.5 2.5 4.0 1.2 167 chr3L 10509471 intron A2bp1 + chr3L 10509554 intron A2bp1 + chr3L 10509638 intron A2bp1 + chr3L_6_10505001 chr3L_10505001 RAL-426 1573 chr3L 10509500 10509502 chr3L 10509612 10509627 4 120 4.0 2.5 3.2 1.0 127 chr3L 10509500 intron A2bp1 + chr3L 10509564 intron A2bp1 + chr3L 10509627 intron A2bp1 + chr3L_4_10505001 chr3L_10505001 RAL-426 1574 chr3L 10509506 10509513 chr3L 10509609 10509641 6 120 3.5 2.0 2.8 1.6 135 chr3L 10509506 intron A2bp1 + chr3L 10509574 intron A2bp1 + chr3L 10509641 intron A2bp1 + chr3L_6_10505001 chr3L_10505001 RAL-426 1575 chr3L 10559511 10559521 chr3L 10559843 10559876 4 346 4.0 6.0 5.0 0.7 365 chr3L 10559511 intron A2bp1 + chr3L 10559694 intron A2bp1 + chr3L 10559876 intron A2bp1 + chr3L_4_10555001 chr3L_10555001 RAL-426 1576 chr3L 10584279 10584299 chr3L 10584386 10584406 4 106 2.5 4.0 3.2 1.0 127 chr3L 10584279 intron A2bp1 + chr3L 10584342 intron A2bp1 + chr3L 10584406 intron A2bp1 + chr3L_4_10580001 chr3L_10580001 RAL-426 1577 chr3L 10600438 10600460 chr3L 10600538 10600548 5 99 6.0 0.0 3.0 1.2 110 chr3L 10600438 intergenic not near genes chr3L 10600493 intergenic not near genes chr3L 10600548 intergenic not near genes chr3L_5_10600001 chr3L_10600001 RAL-426 1578 chr3L 10603694 10603728 chr3L 10603904 10603938 7 209 0.0 5.0 2.5 2.0 244 chr3L 10603694 intergenic not near genes chr3L 10603816 intergenic not near genes chr3L 10603938 intergenic not near genes chr3L_7_10600001 chr3L_10600001 RAL-426 1579 chr3L 10621837 10621879 chr3L 10621943 10621986 7 104 3.5 6.0 4.8 1.2 149 chr3L 10621837 intergenic not near genes chr3L 10621912 intergenic not near genes chr3L 10621986 intergenic not near genes chr3L_7_10620001 chr3L_10620001 RAL-426 1580 chr3L 10653326 10653348 chr3L 10653431 10653452 6 103 5.5 5.0 5.2 1.0 126 chr3L 10653326 intron CG32066 - chr3L 10653389 intron CG32066 - chr3L 10653452 intron CG32066 - chr3L_6_10650001 chr3L_10650001 RAL-426 1581 chr3L 10654117 10654151 chr3L 10654213 10654238 8 98 4.5 3.0 3.8 1.7 121 chr3L 10654117 intron CG32066 - chr3L 10654178 intron CG32066 - chr3L 10654238 intron CG32066 - chr3L_8_10650001 chr3L_10650001 RAL-426 1582 chr3L 10654952 10655004 chr3L 10655051 10655066 13 86 2.5 3.0 2.8 3.4 114 chr3L 10654952 intron CG32066 - chr3L 10655009 intron CG32066 - chr3L 10655066 intron CG32066 - chr3L_13_10655001 chr3L_10655001 RAL-426 1583 chr3L 10694899 10694932 chr3L 10695011 10695044 9 112 0.5 4.5 2.5 2.6 145 chr3L 10694899 intron NijA - chr3L 10694972 intron NijA - chr3L 10695044 exon NijA - chr3L_9_10690001 chr3L_10690001 RAL-426 1584 chr3L 10749441 10749450 chr3L 10749540 10749549 4 99 0.0 8.5 4.2 0.8 108 chr3L 10749441 intergenic not near genes chr3L 10749495 intergenic not near genes chr3L 10749549 intergenic not near genes chr3L_4_10745001 chr3L_10745001 RAL-426 1585 chr3L 10762809 10762861 chr3L 10762913 10762964 8 94 2.5 1.0 1.8 2.9 155 chr3L 10762809 intergenic not near genes chr3L 10762886 intergenic not near genes chr3L 10762964 intergenic not near genes chr3L_8_10760001 chr3L_10760001 RAL-426 1586 chr3L 10778819 10778829 chr3L 10778914 10778925 5 94 0.0 7.0 3.5 1.1 106 chr3L 10778819 intergenic not near genes chr3L 10778872 intergenic not near genes chr3L 10778925 intergenic not near genes chr3L_5_10775001 chr3L_10775001 RAL-426 1587 chr3L 10942068 10942072 chr3L 10942149 10942153 5 85 6.5 10.0 8.2 0.5 85 chr3L 10942068 intergenic not near genes chr3L 10942110 intergenic not near genes chr3L 10942153 intergenic not near genes chr3L_5_10940001 chr3L_10940001 RAL-426 1588 chr3L 11042102 11042104 chr3L 11042261 11042263 4 159 8.0 0.0 4.0 0.8 161 chr3L 11042102 intron CG43693 - chr3L 11042182 intron CG43693 - chr3L 11042263 intron CG43693 - chr3L_4_11040001 chr3L_11040001 RAL-426 1589 chr3L 11042105 11042152 chr3L 11042258 11042310 5 158 2.5 0.0 1.2 2.3 205 chr3L 11042105 intron CG43693 - chr3L 11042208 intron CG43693 - chr3L 11042310 intron CG43693 - chr3L_5_11040001 chr3L_11040001 RAL-426 1590 chr3L 11083487 11083531 chr3L 11083605 11083646 7 117 3.0 2.5 2.8 1.8 159 chr3L 11083487 intron JIL-1 - chr3L 11083566 intron JIL-1 - chr3L 11083646 intron JIL-1 - chr3L_7_11080001 chr3L_11080001 RAL-426 1591 chr3L 11087041 11087081 chr3L 11088850 11088890 S-element 8 1807 3.5 1.0 2.2 2.5 1849 chr3L 11087041 intron JIL-1 - chr3L 11087966 intron JIL-1 - chr3L 11088890 intron JIL-1 - chr3L_8_11085001 chr3L_11085001 RAL-426 1592 chr3L 11090075 11090089 chr3L 11090183 11090197 7 108 2.5 9.0 5.8 1.0 122 chr3L 11090075 intron JIL-1 - chr3L 11090136 intron JIL-1 - chr3L 11090197 intron JIL-1 - chr3L_7_11090001 chr3L_11090001 RAL-426 1593 chr3L 11105283 11105322 chr3L 11107009 11107013 X-element 12 1725 2.0 1.5 1.8 4.3 1730 chr3L 11105283 intergenic not near genes chr3L 11106148 intergenic not near genes chr3L 11107013 3` UTR CG32073 - chr3L_12_11105001 chr3L_11105001 RAL-426 1594 chr3L 11135516 11135806 chr3L 11135766 11135906 18 167 0.0 0.0 0.0 18.0 390 chr3L 11135516 intergenic CG14143 + chr3L 11135711 intergenic CG14143 +,CG32082 + chr3L 11135906 intergenic CG32082 +,CG14143 + chr3L_18_11135001 chr3L_11135001 RAL-426 1595 chr3L 11186253 11186285 chr3L 11186352 11186361 4 90 5.0 1.5 3.2 1.0 108 chr3L 11186253 intron GlcAT-P - chr3L 11186307 intron GlcAT-P - chr3L 11186361 intron GlcAT-P - chr3L_4_11185001 chr3L_11185001 RAL-426 1596 chr3L 11187702 11187736 chr3L 11187798 11187836 5 99 0.0 2.5 1.2 2.3 134 chr3L 11187702 intron GlcAT-P - chr3L 11187769 intron GlcAT-P - chr3L 11187836 intron GlcAT-P - chr3L_5_11185001 chr3L_11185001 RAL-426 1597 chr3L 11241759 11241781 chr3L 11241860 11241883 5 102 0.5 2.5 1.5 2.0 124 chr3L 11241759 intergenic not near genes chr3L 11241821 intergenic not near genes chr3L 11241883 intergenic not near genes chr3L_5_11240001 chr3L_11240001 RAL-426 1598 chr3L 11249843 11249888 chr3L 11249944 11249991 14 102 2.5 5.0 3.8 2.9 148 chr3L 11249843 5` UTR CR44717 + chr3L 11249917 5` UTR CR44717 + chr3L 11249991 5` UTR CR44717 + chr3L_14_11245001 chr3L_11245001 RAL-426 1599 chr3L 11264433 11264478 chr3L 11271417 11271462 17.6 15 6981 2.0 3.0 2.5 4.3 7029 chr3L 11264433 intergenic not near genes chr3L 11267948 intergenic not near genes chr3L 11271462 intergenic not near genes chr3L_15_11265001 chr3L_11265001 RAL-426 1600 chr3L 11277458 11277465 chr3L 11278460 11278477 Rt1a 4 1009 2.5 5.0 3.8 0.8 1019 chr3L 11277458 intergenic not near genes chr3L 11277968 intergenic not near genes chr3L 11278477 intergenic not near genes chr3L_4_11275001 chr3L_11275001 RAL-426 1601 chr3L 11284934 11284937 chr3L 11285025 11285036 5 97 12.5 8.5 10.5 0.4 102 chr3L 11284934 5` UTR CR45404 + chr3L 11284985 5` UTR CR45404 + chr3L 11285036 5` UTR CR45404 + chr3L_5_11280001 chr3L_11280001 RAL-426 1602 chr3L 11329505 11329526 chr3L 11332917 11332938 jockey 5 3408 4.5 6.5 5.5 0.8 3433 chr3L 11329505 intergenic not near genes chr3L 11331222 intergenic not near genes chr3L 11332938 intergenic not near genes chr3L_5_11330001 chr3L_11330001 RAL-426 1603 chr3L 11340512 11340547 chr3L 11340653 11340654 4 128 3.5 2.5 3.0 1.0 142 chr3L 11340512 intergenic not near genes chr3L 11340583 intergenic not near genes chr3L 11340654 intergenic not near genes chr3L_4_11340001 chr3L_11340001 RAL-426 1604 chr3L 11456885 11456904 chr3L 11457004 11457022 7 119 6.0 0.0 3.0 1.8 137 chr3L 11456885 intergenic CG12289 - chr3L 11456954 intergenic CG12289 - chr3L 11457022 intergenic CG12289 - chr3L_7_11455001 chr3L_11455001 RAL-426 1605 chr3L 11528230 11528239 chr3L 11528335 11528343 4 105 5.5 8.0 6.8 0.5 113 chr3L 11528230 intron Mob2 - chr3L 11528286 intron Mob2 - chr3L 11528343 intron Mob2 - chr3L_4_11525001 chr3L_11525001 RAL-426 1606 chr3L 11528240 11528259 chr3L 11528331 11528364 5 102 2.0 7.0 4.5 0.9 124 chr3L 11528240 intron Mob2 - chr3L 11528302 intron Mob2 - chr3L 11528364 intron Mob2 - chr3L_5_11525001 chr3L_11525001 RAL-426 1607 chr3L 11579537 11579579 chr3L 11579661 11579681 13 121 3.5 2.0 2.8 3.4 144 chr3L 11579537 intergenic CG43390 - chr3L 11579609 intergenic CG43390 - chr3L 11579681 intergenic CG43390 - chr3L_13_11575001 chr3L_11575001 RAL-426 1608 chr3L 11633588 11633626 chr3L 11633688 11633726 15 98 5.0 1.0 3.0 3.8 138 chr3L 11633588 intron CG32091 + chr3L 11633657 intron CG32091 + chr3L 11633726 intron CG32091 + chr3L_15_11630001 chr3L_11630001 RAL-426 1609 chr3L 11633863 11633906 chr3L 11634216 11634259 11 348 0.5 5.5 3.0 2.8 396 chr3L 11633863 intron CG32091 + chr3L 11634061 intron CG32091 + chr3L 11634259 intron CG32091 + chr3L_11_11630001 chr3L_11630001 RAL-426 1610 chr3L 11723079 11723107 chr3L 11727876 11727922 Doc 9 4812 4.0 2.5 3.2 2.1 4843 chr3L 11723079 3` UTR Bmcp + chr3L 11725500 intron Bmcp + chr3L 11727922 3` UTR Bmcp + chr3L_9_11725001 chr3L_11725001 RAL-426 1611 chr3L 11757906 11757938 chr3L 11758023 11758041 6 110 3.5 0.0 1.8 2.1 135 chr3L 11757906 intron CG6024 - chr3L 11757974 intron CG6024 - chr3L 11758041 intron CG6024 - chr3L_6_11755001 chr3L_11755001 RAL-426 1612 chr3L 9313026 9313027 chr3L 11777678 11777678 4 2464652 11.5 7.5 9.5 0.4 2464652 chr3L 9313026 intergenic not near genes chr3L 10545352 intron A2bp1 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_4_10545001 chr3L_10545001 RAL-426 1613 chr3L 11777678 11777678 chr3L 12163305 12163305 7 385627 8.5 26.0 17.2 0.4 385627 chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L 11970492 exon Muc68E - chr3L 12163305 intron CG9760 - chr3L_7_11970001 chr3L_11970001 RAL-426 1614 chr3L 11780520 11780537 chr3L 11780625 11780642 7 105 6.5 7.0 6.8 0.9 122 chr3L 11780520 intron Pi3K68D - chr3L 11780581 intron Pi3K68D - chr3L 11780642 intron Pi3K68D - chr3L_7_11780001 chr3L_11780001 RAL-426 1615 chr3L 11780538 11780561 chr3L 11780622 11780664 9 99 3.0 5.5 4.2 1.7 126 chr3L 11780538 intron Pi3K68D - chr3L 11780601 intron Pi3K68D - chr3L 11780664 intron Pi3K68D - chr3L_9_11780001 chr3L_11780001 RAL-426 1616 chr3L 11811441 11811488 chr3L 11811533 11811570 14 92 4.5 4.0 4.2 2.7 129 chr3L 11811441 intron CG42255 - chr3L 11811506 intron CG42255 - chr3L 11811570 exon CG42255 - chr3L_14_11810001 chr3L_11810001 RAL-426 1617 chr3L 11847122 11847168 chr3L 11847232 11847262 8 107 3.0 0.0 1.5 3.2 140 chr3L 11847122 intergenic CG12521 - chr3L 11847192 intergenic CG12521 - chr3L 11847262 intergenic CG12521 - chr3L_8_11845001 chr3L_11845001 RAL-426 1618 chr3L 11849347 11849355 chr3L 11849441 11849474 4 113 4.0 6.0 5.0 0.7 127 chr3L 11849347 intergenic not near genes chr3L 11849410 intergenic not near genes chr3L 11849474 intergenic not near genes chr3L_4_11845001 chr3L_11845001 RAL-426 1619 chr3L 11850127 11850135 chr3L 11850242 11850250 4 114 7.5 0.5 4.0 0.8 123 chr3L 11850127 intergenic not near genes chr3L 11850188 intergenic CG44837 - chr3L 11850250 intergenic CG44837 - chr3L_4_11850001 chr3L_11850001 RAL-426 1620 chr3L 11850139 11850166 chr3L 11850234 11850266 8 107 2.5 0.5 1.5 3.2 127 chr3L 11850139 intergenic not near genes chr3L 11850202 intergenic CG44837 - chr3L 11850266 intergenic CG44837 - chr3L_8_11850001 chr3L_11850001 RAL-426 1621 chr3L 11864540 11864563 chr3L 11865851 11865878 pogo 12 1312 7.0 5.0 6.0 1.7 1338 chr3L 11864540 intron CG44837 - chr3L 11865209 intron CG44837 - chr3L 11865878 intron CG44837 - chr3L_12_11865001 chr3L_11865001 RAL-426 1622 chr3L 11864568 11864583 chr3L 11865850 11865897 pogo 7 1308 3.5 4.5 4.0 1.4 1329 chr3L 11864568 intron CG44837 - chr3L 11865232 intron CG44837 - chr3L 11865897 intron CG44837 - chr3L_7_11865001 chr3L_11865001 RAL-426 1623 chr3L 11887244 11887286 chr3L 11887357 11887407 7 117 2.0 1.0 1.5 2.8 163 chr3L 11887244 intron CG44837 - chr3L 11887326 intron,3` UTR CG44837 -,CG5897 - chr3L 11887407 intron,3` UTR CG44837 -,CG5897 - chr3L_7_11885001 chr3L_11885001 RAL-426 1624 chr3L 11901555 11901576 chr3L 11901700 11901717 4 146 8.5 5.0 6.8 0.5 162 chr3L 11901555 intron CG44837 - chr3L 11901636 intron CG44837 - chr3L 11901717 intron CG44837 - chr3L_4_11900001 chr3L_11900001 RAL-426 1625 chr3L 11943481 11943520 chr3L 11943602 11943641 7 120 1.5 4.0 2.8 1.8 160 chr3L 11943481 3` UTR Rpt4R + chr3L 11943561 intergenic Rpt4R +,CG5883 - chr3L 11943641 3` UTR CG5883 - chr3L_7_11940001 chr3L_11940001 RAL-426 1626 chr3L 12012277 12012328 chr3L 12012376 12012400 17 94 3.0 4.0 3.5 3.8 123 chr3L 12012277 intron rols - chr3L 12012338 intron rols - chr3L 12012400 intron rols - chr3L_17_12010001 chr3L_12010001 RAL-426 1627 chr3L 12013898 12013936 chr3L 12014008 12014021 20 107 4.0 2.5 3.2 4.8 123 chr3L 12013898 intron rols - chr3L 12013960 intron rols - chr3L 12014021 intron rols - chr3L_20_12010001 chr3L_12010001 RAL-426 1628 chr3L 12039622 12039631 chr3L 12039731 12039741 6 110 8.0 0.0 4.0 1.2 119 chr3L 12039622 intron rols - chr3L 12039682 intron rols - chr3L 12039741 intron rols - chr3L_6_12035001 chr3L_12035001 RAL-426 1629 chr3L 12039632 12039652 chr3L 12039720 12039760 11 105 4.5 0.0 2.2 3.4 128 chr3L 12039632 intron rols - chr3L 12039696 intron rols - chr3L 12039760 intron rols - chr3L_11_12035001 chr3L_12035001 RAL-426 1630 chr3L 12042314 12042354 chr3L 12042425 12042465 5 114 14.5 2.0 8.2 0.5 151 chr3L 12042314 intron rols - chr3L 12042390 intron,5` UTR rols -,CG6793 + chr3L 12042465 intron,exon rols -,CG6793 + chr3L_5_12040001 chr3L_12040001 RAL-426 1631 chr3L 12081158 12081199 chr3L 12081445 12081477 12 288 0.0 6.0 3.0 3.0 319 chr3L 12081158 intron Sema-5c - chr3L 12081318 intron Sema-5c - chr3L 12081477 5` UTR Sema-5c - chr3L_12_12080001 chr3L_12080001 RAL-426 1632 chr3L 12092015 12092061 chr3L 12092116 12092133 5 97 1.0 3.0 2.0 1.7 118 chr3L 12092015 intergenic not near genes chr3L 12092074 intergenic not near genes chr3L 12092133 intergenic not near genes chr3L_5_12090001 chr3L_12090001 RAL-426 1633 chr3L 12170790 12170824 chr3L 12170892 12170926 6 102 0.5 3.0 1.8 2.1 136 chr3L 12170790 intron Rh7 - chr3L 12170858 intron Rh7 - chr3L 12170926 intron Rh7 - chr3L_6_12170001 chr3L_12170001 RAL-426 1634 chr3L 12186383 12186394 chr3L 12186531 12186540 5 148 3.0 3.5 3.2 1.2 157 chr3L 12186383 intron CG6910 + chr3L 12186462 intron CG6910 + chr3L 12186540 exon CG6910 + chr3L_5_12185001 chr3L_12185001 RAL-426 1635 chr3L 12204367 12204418 chr3L 12204478 12204529 13 110 2.0 3.5 2.8 3.4 162 chr3L 12204367 3` UTR CG5626 - chr3L 12204448 intron CG5626 - chr3L 12204529 intron CG5626 - chr3L_13_12200001 chr3L_12200001 RAL-426 1636 chr3L 12234303 12234350 chr3L 12234412 12234452 10 108 4.0 3.0 3.5 2.2 149 chr3L 12234303 intron app - chr3L 12234378 intron app - chr3L 12234452 intron app - chr3L_10_12230001 chr3L_12230001 RAL-426 1637 chr3L 12241661 12241689 chr3L 12241756 12241770 8 93 3.0 4.0 3.5 1.8 109 chr3L 12241661 intron app - chr3L 12241716 intron app - chr3L 12241770 intron app - chr3L_8_12240001 chr3L_12240001 RAL-426 1638 chr3L 12364164 12364176 chr3L 12364316 12364332 5 156 0.0 3.0 1.5 2.0 168 chr3L 12364164 intergenic not near genes chr3L 12364248 intergenic not near genes chr3L 12364332 intergenic not near genes chr3L_5_12360001 chr3L_12360001 RAL-426 1639 chr3L 12369514 12369553 chr3L 12369708 12369741 4 192 1.0 0.0 0.5 2.7 227 chr3L 12369514 intron Ncc69 - chr3L 12369628 intron Ncc69 - chr3L 12369741 intron Ncc69 - chr3L_4_12365001 chr3L_12365001 RAL-426 1640 chr3L 12378571 12378589 chr3L 12378752 12378776 7 184 5.0 2.5 3.8 1.5 205 chr3L 12378571 intron Ncc69 - chr3L 12378674 intron Ncc69 - chr3L 12378776 intron Ncc69 - chr3L_7_12375001 chr3L_12375001 RAL-426 1641 chr3L 12378593 12378605 chr3L 12378748 12378793 5 182 3.5 2.5 3.0 1.2 200 chr3L 12378593 intron Ncc69 - chr3L 12378693 intron Ncc69 - chr3L 12378793 intron Ncc69 - chr3L_5_12375001 chr3L_12375001 RAL-426 1642 chr3L 12381525 12381546 chr3L 12381623 12381644 5 98 0.0 1.5 0.8 2.8 119 chr3L 12381525 intron Ncc69 - chr3L 12381584 intron Ncc69 - chr3L 12381644 intron Ncc69 - chr3L_5_12380001 chr3L_12380001 RAL-426 1643 chr3L 12411027 12411068 chr3L 12411144 12411198 6 127 4.0 9.0 6.5 0.8 171 chr3L 12411027 intron CG32103 - chr3L 12411112 intron CG32103 - chr3L 12411198 intron CG32103 - chr3L_6_12410001 chr3L_12410001 RAL-426 1644 chr3L 12460318 12460328 chr3L 12460412 12460425 7 96 0.0 5.0 2.5 2.0 107 chr3L 12460318 intergenic not near genes chr3L 12460372 intergenic not near genes chr3L 12460425 intergenic not near genes chr3L_7_12460001 chr3L_12460001 RAL-426 1645 chr3L 12563988 12564015 chr3L 12564224 12564248 9 234 2.0 5.0 3.5 2.0 260 chr3L 12563988 intron sowah - chr3L 12564118 intron sowah - chr3L 12564248 intron sowah - chr3L_9_12560001 chr3L_12560001 RAL-426 1646 chr3L 12566819 12566846 chr3L 12566925 12566930 4 88 2.5 3.0 2.8 1.1 111 chr3L 12566819 intron sowah - chr3L 12566874 intron sowah - chr3L 12566930 intron sowah - chr3L_4_12565001 chr3L_12565001 RAL-426 1647 chr3L 12626132 12626164 chr3L 12626261 12626290 8 128 2.0 5.0 3.5 1.8 158 chr3L 12626132 intergenic not near genes chr3L 12626211 intergenic not near genes chr3L 12626290 intergenic not near genes chr3L_8_12625001 chr3L_12625001 RAL-426 1648 chr3L 12666910 12666941 chr3L 12667042 12667072 4 132 3.5 0.0 1.8 1.4 162 chr3L 12666910 intergenic not near genes chr3L 12666991 intergenic not near genes chr3L 12667072 intergenic not near genes chr3L_4_12665001 chr3L_12665001 RAL-426 1649 chr3L 12677207 12677254 chr3L 12677326 12677373 10 116 2.0 3.0 2.5 2.9 166 chr3L 12677207 intergenic not near genes chr3L 12677290 intergenic not near genes chr3L 12677373 intergenic not near genes chr3L_10_12675001 chr3L_12675001 RAL-426 1650 chr3L 12689572 12689604 chr3L 12689718 12689746 4 145 0.0 3.0 1.5 1.6 174 chr3L 12689572 intergenic not near genes chr3L 12689659 intergenic not near genes chr3L 12689746 intergenic not near genes chr3L_4_12685001 chr3L_12685001 RAL-426 1651 chr3L 12728023 12728036 chr3L 12728127 12728140 4 104 2.5 1.5 2.0 1.3 117 chr3L 12728023 intergenic not near genes chr3L 12728082 intergenic not near genes chr3L 12728140 intergenic not near genes chr3L_4_12725001 chr3L_12725001 RAL-426 1652 chr3L 12857986 12857998 chr3L 12858110 12858128 5 129 2.5 0.0 1.2 2.3 142 chr3L 12857986 3` UTR CG32107 - chr3L 12858057 3` UTR CG32107 - chr3L 12858128 3` UTR CG32107 - chr3L_5_12855001 chr3L_12855001 RAL-426 1653 chr3L 12871633 12871683 chr3L 12871773 12871823 11 135 2.5 3.5 3.0 2.8 190 chr3L 12871633 intergenic not near genes chr3L 12871728 intergenic not near genes chr3L 12871823 intergenic not near genes chr3L_11_12870001 chr3L_12870001 RAL-426 1654 chr3L 12874909 12874956 chr3L 12877218 12877268 jockey 14 2311 3.0 4.5 3.8 2.9 2359 chr3L 12874909 intergenic not near genes chr3L 12876088 intergenic not near genes chr3L 12877268 intergenic not near genes chr3L_14_12875001 chr3L_12875001 RAL-426 1655 chr3L 12894785 12894809 chr3L 12894882 12894888 10 94 8.5 7.0 7.8 1.1 103 chr3L 12894785 intergenic CG14118 + chr3L 12894836 intergenic CG14118 + chr3L 12894888 intergenic CG14118 + chr3L_10_12890001 chr3L_12890001 RAL-426 1656 chr3L 12928197 12928232 chr3L 12928344 12928379 8 146 4.0 3.0 3.5 1.8 182 chr3L 12928197 intergenic not near genes chr3L 12928288 intergenic not near genes chr3L 12928379 intergenic not near genes chr3L_8_12925001 chr3L_12925001 RAL-426 1657 chr3L 12929711 12929739 chr3L 12930046 12930075 6 336 0.0 3.5 1.8 2.1 364 chr3L 12929711 intergenic not near genes chr3L 12929893 intergenic not near genes chr3L 12930075 intergenic not near genes chr3L_6_12925001 chr3L_12925001 RAL-426 1658 chr3L 12955114 12955128 chr3L 12955210 12955224 5 96 10.0 6.5 8.2 0.5 110 chr3L 12955114 intergenic CG10752 - chr3L 12955169 intergenic not near genes chr3L 12955224 intergenic not near genes chr3L_5_12955001 chr3L_12955001 RAL-426 1659 chr3L 12955130 12955162 chr3L 12955209 12955258 8 93 4.0 6.0 5.0 1.3 128 chr3L 12955130 intergenic CG10752 - chr3L 12955194 intergenic not near genes chr3L 12955258 intergenic not near genes chr3L_8_12955001 chr3L_12955001 RAL-426 1660 chr3L 12957769 12957786 chr3L 12962271 12962288 copia 6 4501 6.5 7.0 6.8 0.8 4519 chr3L 12957769 intergenic not near genes chr3L 12960028 intergenic not near genes chr3L 12962288 intergenic not near genes chr3L_6_12960001 chr3L_12960001 RAL-426 1661 chr3L 12957788 12957817 chr3L 12962266 12962319 copia 6 4494 3.5 5.0 4.2 1.2 4531 chr3L 12957788 intergenic not near genes chr3L 12960054 intergenic not near genes chr3L 12962319 intergenic not near genes chr3L_6_12960001 chr3L_12960001 RAL-426 1662 chr3L 12966122 12966161 chr3L 12966231 12966265 6 102 3.5 2.0 2.8 1.6 143 chr3L 12966122 intron Or69a - chr3L 12966194 intron Or69a - chr3L 12966265 intron Or69a - chr3L_6_12965001 chr3L_12965001 RAL-426 1663 chr3L 12978507 12978766 chr3L 12978609 12978843 13 98 10.5 7.5 9.0 1.3 336 chr3L 12978507 intergenic not near genes chr3L 12978675 intergenic not near genes chr3L 12978843 intergenic not near genes chr3L_13_12975001 chr3L_12975001 RAL-426 1664 chr3L 12980500 12980552 chr3L 12980607 12980665 10 108 4.0 0.0 2.0 3.3 165 chr3L 12980500 intergenic not near genes chr3L 12980582 intergenic not near genes chr3L 12980665 intergenic not near genes chr3L_10_12980001 chr3L_12980001 RAL-426 1665 chr3L 13007681 13007721 chr3L 13007793 13007833 9 109 1.5 1.0 1.2 4.1 152 chr3L 13007681 exon CG11263 + chr3L 13007757 3` UTR CG11263 + chr3L 13007833 3` UTR CG11263 + chr3L_9_13005001 chr3L_13005001 RAL-426 1666 chr3L 13031567 13031575 chr3L 13031674 13031682 4 107 8.0 3.5 5.8 0.6 115 chr3L 13031567 intron CG17672 + chr3L 13031624 intron CG17672 + chr3L 13031682 intron CG17672 + chr3L_4_13030001 chr3L_13030001 RAL-426 1667 chr3L 13031582 13031607 chr3L 13031669 13031703 15 100 2.5 3.5 3.0 3.8 121 chr3L 13031582 intron CG17672 + chr3L 13031642 intron CG17672 + chr3L 13031703 intron CG17672 + chr3L_15_13030001 chr3L_13030001 RAL-426 1668 chr3L 13034442 13034495 chr3L 13034542 13034545 16 87 1.0 3.0 2.0 5.3 103 chr3L 13034442 intron CG17672 + chr3L 13034494 intron CG17672 + chr3L 13034545 intron CG17672 + chr3L_16_13030001 chr3L_13030001 RAL-426 1669 chr3L 13050550 13050596 chr3L 13050646 13050681 10 96 3.0 3.5 3.2 2.4 131 chr3L 13050550 intergenic not near genes chr3L 13050616 intergenic not near genes chr3L 13050681 intergenic not near genes chr3L_10_13050001 chr3L_13050001 RAL-426 1670 chr3L 13088595 13088646 chr3L 13088709 13088759 12 113 4.0 6.5 5.2 1.9 164 chr3L 13088595 3` UTR CG11251 - chr3L 13088677 3` UTR CG11251 - chr3L 13088759 3` UTR CG11251 - chr3L_12_13085001 chr3L_13085001 RAL-426 1671 chr3L 13092048 13092092 chr3L 13092145 13092188 9 97 5.0 1.5 3.2 2.1 140 chr3L 13092048 intergenic not near genes chr3L 13092118 intergenic not near genes chr3L 13092188 intergenic not near genes chr3L_9_13090001 chr3L_13090001 RAL-426 1672 chr3L 13137639 13137660 chr3L 13137743 13137754 6 101 7.0 9.0 8.0 0.7 115 chr3L 13137639 intergenic not near genes chr3L 13137696 intergenic not near genes chr3L 13137754 intergenic not near genes chr3L_6_13135001 chr3L_13135001 RAL-426 1673 chr3L 13137665 13137668 chr3L 13137737 13137738 4 84 6.0 7.0 6.5 0.5 73 chr3L 13137665 intergenic not near genes chr3L 13137702 intergenic not near genes chr3L 13137738 intergenic not near genes chr3L_4_13135001 chr3L_13135001 RAL-426 1674 chr3L 13137673 13137682 chr3L 13137736 13137758 9 77 4.5 6.5 5.5 1.4 85 chr3L 13137673 intergenic not near genes chr3L 13137716 intergenic not near genes chr3L 13137758 intergenic not near genes chr3L_9_13135001 chr3L_13135001 RAL-426 1675 chr3L 13161755 13161797 chr3L 13161849 13161860 5 85 2.5 4.5 3.5 1.1 105 chr3L 13161755 intergenic not near genes chr3L 13161808 intergenic not near genes chr3L 13161860 intergenic not near genes chr3L_5_13160001 chr3L_13160001 RAL-426 1676 chr3L 13218882 13218934 chr3L 13218986 13219005 14 92 6.0 1.5 3.8 2.9 123 chr3L 13218882 intergenic CR45098 - chr3L 13218944 intergenic CR45098 - chr3L 13219005 intergenic CR45098 - chr3L_14_13215001 chr3L_13215001 RAL-426 1677 chr3L 13254708 13254756 chr3L 13254844 13254891 18 132 6.0 2.0 4.0 3.6 183 chr3L 13254708 intron caps + chr3L 13254800 intron caps + chr3L 13254891 intron caps + chr3L_18_13250001 chr3L_13250001 RAL-426 1678 chr3L 13267284 13267298 chr3L 13267399 13267431 6 125 6.0 0.0 3.0 1.5 147 chr3L 13267284 intron caps + chr3L 13267358 intron caps + chr3L 13267431 intron caps + chr3L_6_13265001 chr3L_13265001 RAL-426 1679 chr3L 13304997 13305008 chr3L 13305100 13305111 6 102 7.0 2.0 4.5 1.1 114 chr3L 13304997 intergenic not near genes chr3L 13305054 intergenic not near genes chr3L 13305111 intergenic not near genes chr3L_6_13305001 chr3L_13305001 RAL-426 1680 chr3L 13305019 13305044 chr3L 13305110 13305112 13 96 3.0 3.5 3.2 3.1 93 chr3L 13305019 intergenic not near genes chr3L 13305066 intergenic not near genes chr3L 13305112 intergenic not near genes chr3L_13_13305001 chr3L_13305001 RAL-426 1681 chr3L 13486418 13486463 chr3L 13486684 13486726 8 264 0.0 4.5 2.2 2.5 308 chr3L 13486418 intergenic Abp1 -,Tgi + chr3L 13486572 intergenic Tgi +,Abp1 - chr3L 13486726 intergenic Tgi +,Abp1 - chr3L_8_13485001 chr3L_13485001 RAL-426 1682 chr3L 13525140 13525159 chr3L 13532956 13532970 roo 8 7814 8.5 3.5 6.0 1.1 7830 chr3L 13525140 intergenic not near genes chr3L 13529055 intergenic not near genes chr3L 13532970 intergenic not near genes chr3L_8_13525001 chr3L_13525001 RAL-426 1683 chr3L 13596026 13596049 chr3L 13596161 13596184 6 133 4.5 1.5 3.0 1.5 158 chr3L 13596026 intron bru-3 - chr3L 13596105 intron bru-3 - chr3L 13596184 intron bru-3 - chr3L_6_13595001 chr3L_13595001 RAL-426 1684 chr3L 13596061 13596068 chr3L 13596156 13596183 5 123 4.0 1.5 2.8 1.3 122 chr3L 13596061 intron bru-3 - chr3L 13596122 intron bru-3 - chr3L 13596183 intron bru-3 - chr3L_5_13595001 chr3L_13595001 RAL-426 1685 chr3L 13632545 13632581 chr3L 13632678 13632715 8 134 2.5 2.0 2.2 2.5 170 chr3L 13632545 intron bru-3 - chr3L 13632630 intron bru-3 - chr3L 13632715 intron bru-3 - chr3L_8_13630001 chr3L_13630001 RAL-426 1686 chr3L 13763574 13763621 chr3L 13763820 13763868 6 244 3.5 1.5 2.5 1.7 294 chr3L 13763574 intron bru-3 - chr3L 13763721 intron bru-3 - chr3L 13763868 intron bru-3 - chr3L_6_13760001 chr3L_13760001 RAL-426 1687 chr3L 13764385 13764422 chr3L 13764557 13764596 10 170 3.0 1.5 2.2 3.1 211 chr3L 13764385 intron bru-3 - chr3L 13764490 intron bru-3 - chr3L 13764596 intron bru-3 - chr3L_10_13760001 chr3L_13760001 RAL-426 1688 chr3L 13804532 13804562 chr3L 13822836 13822862 roo 10 18305 4.0 3.5 3.8 2.1 18330 chr3L 13804532 intergenic not near genes chr3L 13813697 intergenic not near genes chr3L 13822862 intergenic not near genes chr3L_10_13810001 chr3L_13810001 RAL-426 1689 chr3L 13958879 13958907 chr3L 13959137 13959165 9 262 32.0 30.0 31.0 0.3 286 chr3L 13958879 intron CG32137 + chr3L 13959022 intron CG32137 + chr3L 13959165 intron CG32137 + chr3L_9_13955001 chr3L_13955001 RAL-426 1690 chr3L 13988471 13988495 chr3L 13988612 13988635 6 141 3.0 5.0 4.0 1.2 164 chr3L 13988471 intron,3` UTR CG17364 -,CG9040 + chr3L 13988553 intron,3` UTR CG17364 -,CG9040 + chr3L 13988635 intron CG17364 - chr3L_6_13985001 chr3L_13985001 RAL-426 1691 chr3L 14136842 14136849 chr3L 14136981 14136990 4 140 0.0 4.5 2.2 1.2 148 chr3L 14136842 intergenic not near genes chr3L 14136916 intergenic not near genes chr3L 14136990 intergenic not near genes chr3L_4_14135001 chr3L_14135001 RAL-426 1692 chr3L 14194280 14194317 chr3L 14194399 14194448 9 129 5.0 2.5 3.8 1.9 168 chr3L 14194280 intron nuf + chr3L 14194364 intron nuf + chr3L 14194448 intron nuf + chr3L_9_14190001 chr3L_14190001 RAL-426 1693 chr3L 14214831 14214865 chr3L 14214927 14214970 4 103 0.0 8.0 4.0 0.8 139 chr3L 14214831 intron nuf + chr3L 14214900 intron nuf + chr3L 14214970 intron nuf + chr3L_4_14210001 chr3L_14210001 RAL-426 1694 chr3L 14265175 14265214 chr3L 14265298 14265337 8 122 2.5 3.0 2.8 2.1 162 chr3L 14265175 intergenic not near genes chr3L 14265256 intergenic not near genes chr3L 14265337 intergenic not near genes chr3L_8_14265001 chr3L_14265001 RAL-426 1695 chr3L 14267355 14267398 chr3L 14271814 14271820 F-element 9 4445 4.5 4.5 4.5 1.6 4465 chr3L 14267355 intergenic not near genes chr3L 14269588 intergenic not near genes chr3L 14271820 intergenic not near genes chr3L_9_14265001 chr3L_14265001 RAL-426 1696 chr3L 14282571 14282606 chr3L 14282671 14282693 14 97 4.5 5.0 4.8 2.4 122 chr3L 14282571 intron fz + chr3L 14282632 intron fz + chr3L 14282693 intron fz + chr3L_14_14280001 chr3L_14280001 RAL-426 1697 chr3L 14295969 14296002 chr3L 14296471 14296508 roo 15 502 4.0 2.0 3.0 3.8 539 chr3L 14295969 intron fz + chr3L 14296238 intron fz + chr3L 14296508 intron fz + chr3L_15_14295001 chr3L_14295001 RAL-426 1698 chr3L 14322529 14322566 chr3L 14322614 14322650 8 87 3.0 3.0 3.0 2.0 121 chr3L 14322529 intron fz + chr3L 14322590 intron,3` UTR fz +,CR45025 - chr3L 14322650 intron,3` UTR fz +,CR45025 - chr3L_8_14320001 chr3L_14320001 RAL-426 1699 chr3L 14393052 14393098 chr3L 14393169 14393214 9 117 2.5 5.5 4.0 1.8 162 chr3L 14393052 intergenic not near genes chr3L 14393133 intergenic not near genes chr3L 14393214 intergenic not near genes chr3L_9_14390001 chr3L_14390001 RAL-426 1700 chr3L 14413895 14413940 chr3L 14414014 14414053 6 118 1.5 3.5 2.5 1.7 158 chr3L 14413895 intron bbg - chr3L 14413974 intron bbg - chr3L 14414053 intron bbg - chr3L_6_14410001 chr3L_14410001 RAL-426 1701 chr3L 14429420 14429461 chr3L 14429516 14429547 6 93 6.0 4.5 5.2 1.0 127 chr3L 14429420 intron bbg - chr3L 14429484 intron bbg - chr3L 14429547 intron bbg - chr3L_6_14425001 chr3L_14425001 RAL-426 1702 chr3L 14454469 14454496 chr3L 14454563 14454593 7 95 2.0 4.5 3.2 1.7 124 chr3L 14454469 intron bbg - chr3L 14454531 intron bbg - chr3L 14454593 intron bbg - chr3L_7_14450001 chr3L_14450001 RAL-426 1703 chr3L 14455348 14455397 chr3L 14455448 14455496 6 99 2.0 0.0 1.0 3.0 148 chr3L 14455348 intron bbg - chr3L 14455422 intron bbg - chr3L 14455496 intron bbg - chr3L_6_14455001 chr3L_14455001 RAL-426 1704 chr3L 14462877 14462909 chr3L 14462975 14463016 6 105 0.0 2.0 1.0 3.0 139 chr3L 14462877 intron bbg - chr3L 14462946 intron bbg - chr3L 14463016 intron bbg - chr3L_6_14460001 chr3L_14460001 RAL-426 1705 chr3L 14468433 14468473 chr3L 14473659 14473699 copia 13 5222 4.0 5.5 4.8 2.2 5266 chr3L 14468433 intron bbg - chr3L 14471066 intron bbg - chr3L 14473699 intron bbg - chr3L_13_14470001 chr3L_14470001 RAL-426 1706 chr3L 14486136 14486168 chr3L 14486233 14486265 5 97 0.0 6.0 3.0 1.2 129 chr3L 14486136 intron bbg - chr3L 14486200 intron bbg - chr3L 14486265 intron bbg - chr3L_5_14485001 chr3L_14485001 RAL-426 1707 chr3L 14502331 14502343 chr3L 14502491 14502503 4 159 4.0 5.5 4.8 0.7 172 chr3L 14502331 intron bbg - chr3L 14502417 intron bbg - chr3L 14502503 intron bbg - chr3L_4_14500001 chr3L_14500001 RAL-426 1708 chr3L 14546637 14546811 chr3L 14546712 14546911 6 93 0.5 2.5 1.5 2.4 274 chr3L 14546637 intron CG9238 - chr3L 14546774 intron CG9238 - chr3L 14546911 intron CG9238 - chr3L_6_14545001 chr3L_14545001 RAL-426 1709 chr3L 14552580 14552598 chr3L 14552659 14552698 7 89 1.5 7.0 4.2 1.3 118 chr3L 14552580 intergenic not near genes chr3L 14552639 intergenic not near genes chr3L 14552698 intergenic not near genes chr3L_7_14550001 chr3L_14550001 RAL-426 1710 chr3L 14555898 14555940 chr3L 14556000 14556042 6 101 0.5 3.5 2.0 2.0 144 chr3L 14555898 intergenic not near genes chr3L 14555970 intergenic not near genes chr3L 14556042 intergenic not near genes chr3L_6_14555001 chr3L_14555001 RAL-426 1711 chr3L 14639102 14639134 chr3L 14639202 14639234 12 99 4.5 6.5 5.5 1.8 132 chr3L 14639102 intron dlp + chr3L 14639168 intron dlp + chr3L 14639234 intron dlp + chr3L_12_14635001 chr3L_14635001 RAL-426 1712 chr3L 14695367 14695415 chr3L 14695482 14695530 12 114 3.0 3.0 3.0 3.0 163 chr3L 14695367 intron ome + chr3L 14695448 intron ome + chr3L 14695530 intron ome + chr3L_12_14695001 chr3L_14695001 RAL-426 1713 chr3L 14707882 14707935 chr3L 14707978 14708018 17 90 2.0 3.0 2.5 4.9 136 chr3L 14707882 intron ome + chr3L 14707950 intron ome + chr3L 14708018 intron ome + chr3L_17_14705001 chr3L_14705001 RAL-426 1714 chr3L 14721187 14721210 chr3L 14723024 14723056 Rt1c 6 1847 3.5 6.0 4.8 1.0 1869 chr3L 14721187 intron ome + chr3L 14722122 intron ome + chr3L 14723056 intron ome + chr3L_6_14720001 chr3L_14720001 RAL-426 1715 chr3L 14725584 14725607 chr3L 14728598 14728618 Doc 5 3013 0.0 8.5 4.2 1.0 3034 chr3L 14725584 intron ome + chr3L 14727101 intron ome + chr3L 14728618 intron ome + chr3L_5_14725001 chr3L_14725001 RAL-426 1716 chr3L 14743944 14743959 chr3L 14744116 14744131 4 172 4.0 5.0 4.5 0.7 187 chr3L 14743944 intron ome + chr3L 14744038 intron ome + chr3L 14744131 intron ome + chr3L_4_14740001 chr3L_14740001 RAL-426 1717 chr3L 14747254 14747291 chr3L 14747353 14747391 5 97 5.0 3.0 4.0 1.0 137 chr3L 14747254 3` UTR ome + chr3L 14747322 3` UTR ome + chr3L 14747391 3` UTR ome + chr3L_5_14745001 chr3L_14745001 RAL-426 1718 chr3L 14899989 14900037 chr3L 14900098 14900146 18 104 5.0 6.5 5.8 2.6 157 chr3L 14899989 intergenic not near genes chr3L 14900068 intergenic not near genes chr3L 14900146 intergenic not near genes chr3L_18_14900001 chr3L_14900001 RAL-426 1719 chr3L 14914056 14914068 chr3L 14914222 14914234 4 166 6.5 1.5 4.0 0.8 178 chr3L 14914056 intron DCX-EMAP + chr3L 14914145 intron DCX-EMAP + chr3L 14914234 intron DCX-EMAP + chr3L_4_14910001 chr3L_14910001 RAL-426 1720 chr3L 14939207 14939246 chr3L 14939368 14939397 9 161 3.5 3.0 3.2 2.1 190 chr3L 14939207 intron DCX-EMAP + chr3L 14939302 intron DCX-EMAP + chr3L 14939397 intron DCX-EMAP + chr3L_9_14935001 chr3L_14935001 RAL-426 1721 chr3L 14995911 14995945 chr3L 14996032 14996063 6 116 3.0 6.5 4.8 1.0 152 chr3L 14995911 intron Zip71B + chr3L 14995987 intron Zip71B + chr3L 14996063 intron Zip71B + chr3L_6_14995001 chr3L_14995001 RAL-426 1722 chr3L 15085031 15085055 chr3L 15086217 15086241 1360 5 1186 2.5 2.5 2.5 1.4 1210 chr3L 15085031 intron cp309 - chr3L 15085636 intron cp309 - chr3L 15086241 intron cp309 - chr3L_5_15085001 chr3L_15085001 RAL-426 1723 chr3L 15166954 15166996 chr3L 15167056 15167103 12 107 4.5 4.5 4.5 2.2 149 chr3L 15166954 intergenic not near genes chr3L 15167028 intergenic not near genes chr3L 15167103 intergenic not near genes chr3L_12_15165001 chr3L_15165001 RAL-426 1724 chr3L 15233544 15233577 chr3L 15233639 15233678 7 100 3.5 1.5 2.5 2.0 134 chr3L 15233544 intergenic not near genes chr3L 15233611 intergenic not near genes chr3L 15233678 intergenic not near genes chr3L_7_15230001 chr3L_15230001 RAL-426 1725 chr3L 15257412 15257425 chr3L 15257645 15257658 4 233 6.0 2.5 4.2 0.8 246 chr3L 15257412 intergenic not near genes chr3L 15257535 intergenic not near genes chr3L 15257658 intergenic not near genes chr3L_4_15255001 chr3L_15255001 RAL-426 1726 chr3L 15258973 15259010 chr3L 15259056 15259107 8 84 5.5 7.5 6.5 1.1 134 chr3L 15258973 intergenic not near genes chr3L 15259040 intergenic not near genes chr3L 15259107 intergenic not near genes chr3L_8_15255001 chr3L_15255001 RAL-426 1727 chr3L 15278195 15278237 chr3L 15278303 15278317 10 102 7.0 3.5 5.2 1.6 122 chr3L 15278195 intergenic not near genes chr3L 15278256 intergenic not near genes chr3L 15278317 intergenic not near genes chr3L_10_15275001 chr3L_15275001 RAL-426 1728 chr3L 15295746 15295764 chr3L 15298609 15298627 gypsy5 5 2862 2.5 1.0 1.8 1.8 2881 chr3L 15295746 intergenic not near genes chr3L 15297186 intergenic not near genes chr3L 15298627 intergenic Best4 + chr3L_5_15295001 chr3L_15295001 RAL-426 1729 chr3L 15333132 15333170 chr3L 15333232 15333272 11 98 0.0 4.5 2.2 3.4 140 chr3L 15333132 intergenic CR43247 + chr3L 15333202 intergenic CR43247 + chr3L 15333272 intergenic CR43247 + chr3L_11_15330001 chr3L_15330001 RAL-426 1730 chr3L 15354502 15354551 chr3L 15354626 15354674 12 121 2.5 1.0 1.8 4.3 172 chr3L 15354502 intergenic not near genes chr3L 15354588 intergenic not near genes chr3L 15354674 intergenic not near genes chr3L_12_15350001 chr3L_15350001 RAL-426 1731 chr3L 15361157 15361174 chr3L 15361216 15361251 5 72 5.0 3.0 4.0 1.0 94 chr3L 15361157 intergenic not near genes chr3L 15361204 intergenic not near genes chr3L 15361251 intergenic not near genes chr3L_5_15360001 chr3L_15360001 RAL-426 1732 chr3L 15423747 15423774 chr3L 15426611 15426638 opus 8 2864 4.0 1.0 2.5 2.3 2891 chr3L 15423747 intergenic not near genes chr3L 15425192 intergenic not near genes chr3L 15426638 intergenic not near genes chr3L_8_15425001 chr3L_15425001 RAL-426 1733 chr3L 15430604 15430645 chr3L 15430700 15430741 6 94 4.0 2.5 3.2 1.4 137 chr3L 15430604 intergenic not near genes chr3L 15430672 intergenic not near genes chr3L 15430741 intergenic not near genes chr3L_6_15430001 chr3L_15430001 RAL-426 1734 chr3L 15450315 15450358 chr3L 15450423 15450429 4 99 2.0 0.0 1.0 2.0 114 chr3L 15450315 intergenic not near genes chr3L 15450372 intergenic not near genes chr3L 15450429 intergenic not near genes chr3L_4_15450001 chr3L_15450001 RAL-426 1735 chr3L 15466031 15466139 chr3L 15466133 15466255 6 111 0.0 0.0 0.0 6.0 224 chr3L 15466031 intergenic not near genes chr3L 15466143 intergenic not near genes chr3L 15466255 intergenic not near genes chr3L_6_15465001 chr3L_15465001 RAL-426 1736 chr3L 15477665 15477710 chr3L 15477802 15477829 10 129 3.0 7.0 5.0 1.7 164 chr3L 15477665 intergenic not near genes chr3L 15477747 intergenic not near genes chr3L 15477829 intergenic not near genes chr3L_10_15475001 chr3L_15475001 RAL-426 1737 chr3L 15495756 15495791 chr3L 15495857 15495892 5 98 2.5 4.0 3.2 1.2 136 chr3L 15495756 intergenic CG12355 - chr3L 15495824 intergenic CG12355 - chr3L 15495892 intergenic CG12355 - chr3L_5_15495001 chr3L_15495001 RAL-426 1738 chr3L 15516135 15516158 chr3L 15516402 15516427 4 268 0.5 0.0 0.2 3.3 292 chr3L 15516135 intergenic CG13454 - chr3L 15516281 intergenic CG13454 - chr3L 15516427 intergenic CG13454 - chr3L_4_15515001 chr3L_15515001 RAL-426 1739 chr3L 15541598 15541650 chr3L 15541708 15541758 6 105 5.5 2.0 3.8 1.2 160 chr3L 15541598 intron CrebA + chr3L 15541678 intron CrebA + chr3L 15541758 intron CrebA + chr3L_6_15540001 chr3L_15540001 RAL-426 1740 chr3L 15554904 15554950 chr3L 15556711 15556744 S-element 10 1805 3.0 3.0 3.0 2.5 1840 chr3L 15554904 intron AGO2 + chr3L 15555824 intron AGO2 + chr3L 15556744 intron AGO2 + chr3L_10_15555001 chr3L_15555001 RAL-426 1741 chr3L 15600179 15600197 chr3L 15600300 15600318 6 121 3.0 2.0 2.5 1.7 139 chr3L 15600179 intron RhoGAP71E + chr3L 15600248 intron RhoGAP71E + chr3L 15600318 intron RhoGAP71E + chr3L_6_15600001 chr3L_15600001 RAL-426 1742 chr3L 15691398 15691446 chr3L 15691500 15691500 8 88 1.5 2.0 1.8 2.9 102 chr3L 15691398 intron CG34451 - chr3L 15691449 intron CG34451 - chr3L 15691500 intron CG34451 - chr3L_8_15690001 chr3L_15690001 RAL-426 1743 chr3L 15740158 15740189 chr3L 15740244 15740287 15 95 2.5 4.0 3.2 3.6 129 chr3L 15740158 intergenic not near genes chr3L 15740222 intergenic not near genes chr3L 15740287 intergenic not near genes chr3L_15_15740001 chr3L_15740001 RAL-426 1744 chr3L 15744653 15744689 chr3L 15744749 15744796 5 103 4.5 0.0 2.2 1.6 143 chr3L 15744653 intergenic not near genes chr3L 15744724 intergenic not near genes chr3L 15744796 intergenic not near genes chr3L_5_15740001 chr3L_15740001 RAL-426 1745 chr3L 15752679 15752710 chr3L 15752986 15753017 8 306 4.0 3.0 3.5 1.8 338 chr3L 15752679 intergenic not near genes chr3L 15752848 intergenic not near genes chr3L 15753017 intergenic not near genes chr3L_8_15750001 chr3L_15750001 RAL-426 1746 chr3L 15756872 15756900 chr3L 15756974 15756999 5 98 4.5 0.5 2.5 1.4 127 chr3L 15756872 intergenic not near genes chr3L 15756936 intergenic not near genes chr3L 15756999 intergenic not near genes chr3L_5_15755001 chr3L_15755001 RAL-426 1747 chr3L 15782550 15782580 chr3L 15782672 15782702 6 119 0.0 7.5 3.8 1.2 152 chr3L 15782550 intergenic not near genes chr3L 15782626 intergenic not near genes chr3L 15782702 intergenic not near genes chr3L_6_15780001 chr3L_15780001 RAL-426 1748 chr3L 15811531 15811578 chr3L 15811636 15811682 5 102 0.5 2.5 1.5 2.0 151 chr3L 15811531 intron fwe - chr3L 15811606 intron fwe - chr3L 15811682 intron fwe - chr3L_5_15810001 chr3L_15810001 RAL-426 1749 chr3L 15871573 15871612 chr3L 15871676 15871716 6 104 4.0 1.0 2.5 1.7 143 chr3L 15871573 intron pHCl - chr3L 15871644 intron pHCl - chr3L 15871716 intron pHCl - chr3L_6_15870001 chr3L_15870001 RAL-426 1750 chr3L 15883173 15883203 chr3L 15883486 15883499 7 309 1.5 3.5 2.5 2.0 326 chr3L 15883173 intron pHCl - chr3L 15883336 intron pHCl - chr3L 15883499 intron pHCl - chr3L_7_15880001 chr3L_15880001 RAL-426 1751 chr3L 15883211 15883223 chr3L 15883485 15883506 4 295 1.0 3.0 2.0 1.3 295 chr3L 15883211 intron pHCl - chr3L 15883358 intron pHCl - chr3L 15883506 intron pHCl - chr3L_4_15880001 chr3L_15880001 RAL-426 1752 chr3L 15899247 15899263 chr3L 15899804 15899827 jockey 4 567 2.0 2.5 2.2 1.2 580 chr3L 15899247 intergenic pHCl - chr3L 15899537 intergenic not near genes chr3L 15899827 intergenic sff - chr3L_4_15895001 chr3L_15895001 RAL-426 1753 chr3L 15907344 15907372 chr3L 15907448 15907476 7 103 7.5 0.0 3.8 1.5 132 chr3L 15907344 intron sff - chr3L 15907410 intron sff - chr3L 15907476 intron sff - chr3L_7_15905001 chr3L_15905001 RAL-426 1754 chr3L 15922481 15922595 chr3L 15922579 15922686 13 102 0.0 0.0 0.0 13.0 205 chr3L 15922481 intron sff - chr3L 15922584 intron sff - chr3L 15922686 intron sff - chr3L_13_15920001 chr3L_15920001 RAL-426 1755 chr3L 16158824 16158835 chr3L 16158926 16158940 4 104 0.0 1.5 0.8 2.2 116 chr3L 16158824 intron CG5151 - chr3L 16158882 intron CG5151 - chr3L 16158940 intron CG5151 - chr3L_4_16155001 chr3L_16155001 RAL-426 1756 chr3L 16184092 16184136 chr3L 16188930 16188975 X-element 13 4834 4.0 5.0 4.5 2.4 4883 chr3L 16184092 intergenic not near genes chr3L 16186534 intergenic not near genes chr3L 16188975 intergenic not near genes chr3L_13_16185001 chr3L_16185001 RAL-426 1757 chr3L 16212792 16212834 chr3L 16212901 16212945 6 110 5.0 1.0 3.0 1.5 153 chr3L 16212792 intergenic CG13073 - chr3L 16212868 intergenic CG13073 - chr3L 16212945 intergenic CG13073 - chr3L_6_16210001 chr3L_16210001 RAL-426 1758 chr3L 16212837 16212842 chr3L 16212900 16212953 4 96 3.5 1.0 2.2 1.2 116 chr3L 16212837 intergenic CG13073 - chr3L 16212895 intergenic CG13073 - chr3L 16212953 intergenic CG13073 - chr3L_4_16210001 chr3L_16210001 RAL-426 1759 chr3L 16239895 16239929 chr3L 16240005 16240042 5 112 3.0 2.5 2.8 1.3 147 chr3L 16239895 intergenic l(3)72Dr + chr3L 16239968 intergenic not near genes chr3L 16240042 intergenic not near genes chr3L_5_16235001 chr3L_16235001 RAL-426 1760 chr3L 16278503 16278523 chr3L 16278602 16278602 4 98 5.0 4.0 4.5 0.7 99 chr3L 16278503 3` UTR CG13050 - chr3L 16278552 3` UTR CG13050 - chr3L 16278602 3` UTR CG13050 - chr3L_4_16275001 chr3L_16275001 RAL-426 1761 chr3L 16311562 16311599 chr3L 16311648 16311662 13 88 15.5 14.5 15.0 0.8 100 chr3L 16311562 intergenic CR32160 + chr3L 16311612 intergenic CR32160 + chr3L 16311662 intergenic CR32160 + chr3L_13_16310001 chr3L_16310001 RAL-426 1762 chr3L 16357088 16357129 chr3L 16357407 16357453 11 319 2.0 7.0 4.5 2.0 365 chr3L 16357088 intron CG45057 - chr3L 16357270 intron CG45057 - chr3L 16357453 intron CG45057 - chr3L_11_16355001 chr3L_16355001 RAL-426 1763 chr3L 16385138 16385165 chr3L 16385235 16385262 9 96 6.0 3.5 4.8 1.6 124 chr3L 16385138 intron CG4729 - chr3L 16385200 intron CG4729 - chr3L 16385262 intron CG4729 - chr3L_9_16385001 chr3L_16385001 RAL-426 1764 chr3L 16398689 16398701 chr3L 16402703 16402735 5 4021 21.0 30.5 25.8 0.2 4046 chr3L 16398689 exon CG44836 - chr3L 16400712 intergenic CG44836 - chr3L 16402735 intergenic fax - chr3L_5_16400001 chr3L_16400001 RAL-426 1765 chr3L 16428462 16428506 chr3L 16428673 16428684 14 209 8.0 2.0 5.0 2.3 222 chr3L 16428462 intron,intron CG33158 +,dsx-c73A - chr3L 16428573 intron,intron CG33158 +,dsx-c73A - chr3L 16428684 intron,intron CG33158 +,dsx-c73A - chr3L_14_16425001 chr3L_16425001 RAL-426 1766 chr3L 16443829 16443879 chr3L 16446189 16446239 Doc 15 2359 2.5 6.0 4.2 2.9 2410 chr3L 16443829 intron,intron CG33158 +,dsx-c73A - chr3L 16445034 intron,intron CG33158 +,dsx-c73A - chr3L 16446239 intron,intron CG33158 +,dsx-c73A - chr3L_15_16445001 chr3L_16445001 RAL-426 1767 chr3L 16458253 16458287 chr3L 16458386 16458420 8 132 5.5 1.5 3.5 1.8 167 chr3L 16458253 intron CG33158 + chr3L 16458336 intron CG33158 + chr3L 16458420 intron CG33158 + chr3L_8_16455001 chr3L_16455001 RAL-426 1768 chr3L 16493956 16494007 chr3L 16494493 16494542 jockey 8 529 3.5 8.0 5.8 1.2 586 chr3L 16493956 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494249 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494542 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_8_16490001 chr3L_16490001 RAL-426 1769 chr3L 16508727 16508740 chr3L 16508916 16508922 4 196 2.5 5.0 3.8 0.8 195 chr3L 16508727 intron CG43373 - chr3L 16508824 intron CG43373 - chr3L 16508922 intron CG43373 - chr3L_4_16505001 chr3L_16505001 RAL-426 1770 chr3L 16514536 16514552 chr3L 16514640 16514650 4 103 3.5 4.0 3.8 0.8 114 chr3L 16514536 intron CG43373 - chr3L 16514593 intron CG43373 - chr3L 16514650 intron CG43373 - chr3L_4_16510001 chr3L_16510001 RAL-426 1771 chr3L 16515321 16515337 chr3L 16515425 16515441 5 103 3.5 5.0 4.2 1.0 120 chr3L 16515321 intron CG43373 - chr3L 16515381 intron CG43373 - chr3L 16515441 intron CG43373 - chr3L_5_16515001 chr3L_16515001 RAL-426 1772 chr3L 16616517 16616540 chr3L 16621848 16621879 297 7 5338 4.5 4.5 4.5 1.3 5362 chr3L 16616517 3` UTR Abl - chr3L 16619198 3` UTR Abl - chr3L 16621879 3` UTR Abl - chr3L_7_16615001 chr3L_16615001 RAL-426 1773 chr3L 16635709 16635761 chr3L 16635861 16635913 16 147 3.0 5.5 4.2 3.1 204 chr3L 16635709 intron Abl - chr3L 16635811 intron Abl - chr3L 16635913 intron Abl - chr3L_16_16635001 chr3L_16635001 RAL-426 1774 chr3L 16652264 16652304 chr3L 16652369 16652388 10 98 3.5 6.0 4.8 1.7 124 chr3L 16652264 intron Baldspot - chr3L 16652326 intron Baldspot - chr3L 16652388 intron Baldspot - chr3L_10_16650001 chr3L_16650001 RAL-426 1775 chr3L 16668735 16668751 chr3L 16668839 16668856 5 104 7.5 3.5 5.5 0.8 121 chr3L 16668735 intergenic not near genes chr3L 16668796 intergenic not near genes chr3L 16668856 intergenic not near genes chr3L_5_16665001 chr3L_16665001 RAL-426 1776 chr3L 16668753 16668774 chr3L 16668831 16668881 7 102 5.0 3.5 4.2 1.3 128 chr3L 16668753 intergenic not near genes chr3L 16668817 intergenic not near genes chr3L 16668881 intergenic not near genes chr3L_7_16665001 chr3L_16665001 RAL-426 1777 chr3L 16684008 16684051 chr3L 16689249 16689292 copia 4 5241 2.0 1.5 1.8 1.4 5284 chr3L 16684008 intron,intron Lasp -,CG43954 - chr3L 16686650 intron,intron Lasp -,CG43954 - chr3L 16689292 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_4_16685001 chr3L_16685001 RAL-426 1778 chr3L 16693845 16693871 chr3L 16694187 16694191 8 339 5.0 1.0 3.0 2.0 346 chr3L 16693845 intron,intron,intron Lasp -,CG43954 -,CR45179 + chr3L 16694018 intron,intron,intron Lasp -,CG43954 -,CR45179 + chr3L 16694191 intron,intron,intron Lasp -,CG43954 -,CR45179 + chr3L_8_16690001 chr3L_16690001 RAL-426 1779 chr3L 16693876 16693883 chr3L 16694181 16694229 6 336 3.5 1.0 2.2 1.9 353 chr3L 16693876 intron,intron,intron Lasp -,CG43954 -,CR45179 + chr3L 16694052 intron,intron,intron Lasp -,CG43954 -,CR45179 + chr3L 16694229 exon,5` UTR,intron Lasp -,CG43954 -,CR45179 + chr3L_6_16690001 chr3L_16690001 RAL-426 1780 chr3L 16845028 16845041 chr3L 16845139 16845174 5 122 5.0 0.5 2.8 1.3 146 chr3L 16845028 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845101 intergenic CG9669 -,CG9715 + chr3L 16845174 intergenic CG9669 -,CG9715 + chr3L_5_16845001 chr3L_16845001 RAL-426 1781 chr3L 16869561 16869577 chr3L 16869664 16869677 7 102 4.5 3.5 4.0 1.4 116 chr3L 16869561 intron Lmpt + chr3L 16869619 intron Lmpt + chr3L 16869677 intron Lmpt + chr3L_7_16865001 chr3L_16865001 RAL-426 1782 chr3L 16869586 16869602 chr3L 16869661 16869704 8 92 3.0 3.5 3.2 1.9 118 chr3L 16869586 intron Lmpt + chr3L 16869645 intron Lmpt + chr3L 16869704 intron Lmpt + chr3L_8_16865001 chr3L_16865001 RAL-426 1783 chr3L 16870854 16870895 chr3L 16870966 16871005 6 111 1.5 0.5 1.0 3.0 151 chr3L 16870854 intron Lmpt + chr3L 16870930 intron Lmpt + chr3L 16871005 intron Lmpt + chr3L_6_16870001 chr3L_16870001 RAL-426 1784 chr3L 16941380 16941416 chr3L 16941501 16941537 19 120 8.5 0.0 4.2 3.7 157 chr3L 16941380 intron Cpr73D - chr3L 16941458 intron Cpr73D - chr3L 16941537 intron Cpr73D - chr3L_19_16940001 chr3L_16940001 RAL-426 1785 chr3L 16945714 16945756 chr3L 16954880 16954888 roo 7 9154 2.0 2.0 2.0 2.3 9174 chr3L 16945714 exon Obp73a + chr3L 16950301 intergenic not near genes chr3L 16954888 5` UTR Nc73EF + chr3L_7_16950001 chr3L_16950001 RAL-426 1786 chr3L 16986768 16986792 chr3L 16986871 16986895 9 103 8.0 3.0 5.5 1.4 127 chr3L 16986768 intron Exn + chr3L 16986832 intron Exn + chr3L 16986895 intron Exn + chr3L_9_16985001 chr3L_16985001 RAL-426 1787 chr3L 17027374 17027426 chr3L 17027477 17027529 17 101 0.5 5.5 3.0 4.2 155 chr3L 17027374 intergenic CG7730 +,Fit2 + chr3L 17027452 intergenic CG7730 +,Fit2 + chr3L 17027529 5` UTR CG7730 + chr3L_17_17025001 chr3L_17025001 RAL-426 1788 chr3L 17032451 17032471 chr3L 17032572 17032605 7 129 4.0 7.0 5.5 1.1 154 chr3L 17032451 3` UTR CR45756 - chr3L 17032528 3` UTR CR45756 - chr3L 17032605 3` UTR CR45756 - chr3L_7_17030001 chr3L_17030001 RAL-426 1789 chr3L 17032474 17032485 chr3L 17032569 17032620 4 120 2.5 6.5 4.5 0.7 146 chr3L 17032474 3` UTR CR45756 - chr3L 17032547 3` UTR CR45756 - chr3L 17032620 intergenic CR45756 -,CR43250 - chr3L_4_17030001 chr3L_17030001 RAL-426 1790 chr3L 17034916 17034969 chr3L 17035124 17035139 G2 6 201 1.0 1.5 1.2 2.7 223 chr3L 17034916 intergenic not near genes chr3L 17035028 intergenic not near genes chr3L 17035139 intergenic not near genes chr3L_6_17035001 chr3L_17035001 RAL-426 1791 chr3L 17084989 17085031 chr3L 17094158 17094200 roo 12 9166 5.5 6.0 5.8 1.8 9211 chr3L 17084989 intron Rbp6 - chr3L 17089594 intron Rbp6 - chr3L 17094200 intron Rbp6 - chr3L_12_17085001 chr3L_17085001 RAL-426 1792 chr3L 17120633 17120685 chr3L 17120728 17120781 20 89 2.5 2.5 2.5 5.7 148 chr3L 17120633 intron Rbp6 - chr3L 17120707 intron Rbp6 - chr3L 17120781 intron Rbp6 - chr3L_20_17120001 chr3L_17120001 RAL-426 1793 chr3L 17199130 17199158 chr3L 17199261 17199289 5 131 5.5 5.0 5.2 0.8 159 chr3L 17199130 intron Rbp6 - chr3L 17199210 intron Rbp6 - chr3L 17199289 intron Rbp6 - chr3L_5_17195001 chr3L_17195001 RAL-426 1794 chr3L 17209197 17209213 chr3L 17209282 17209316 5 97 3.0 4.0 3.5 1.1 119 chr3L 17209197 intron Rbp6 - chr3L 17209256 intron Rbp6 - chr3L 17209316 intron Rbp6 - chr3L_5_17205001 chr3L_17205001 RAL-426 1795 chr3L 17272234 17272266 chr3L 17272387 17272419 8 153 0.5 4.5 2.5 2.3 185 chr3L 17272234 intergenic not near genes chr3L 17272326 intergenic not near genes chr3L 17272419 intergenic not near genes chr3L_8_17270001 chr3L_17270001 RAL-426 1796 chr3L 17331066 17331094 chr3L 17331153 17331203 9 107 1.5 3.0 2.2 2.8 137 chr3L 17331066 intergenic not near genes chr3L 17331134 intergenic not near genes chr3L 17331203 intergenic not near genes chr3L_9_17330001 chr3L_17330001 RAL-426 1797 chr3L 17428932 17428951 chr3L 17429034 17429054 8 102 8.0 4.5 6.2 1.1 122 chr3L 17428932 intergenic CG32174 -,frc -,CG33052 - chr3L 17428993 3` UTR,3` UTR CG32174 -,frc - chr3L 17429054 3` UTR,3` UTR CG32174 -,frc - chr3L_8_17425001 chr3L_17425001 RAL-426 1798 chr3L 17428953 17428980 chr3L 17429032 17429083 11 98 4.5 4.5 4.5 2.0 130 chr3L 17428953 3` UTR,3` UTR CG32174 -,frc - chr3L 17429018 3` UTR,3` UTR CG32174 -,frc - chr3L 17429083 3` UTR,3` UTR CG32174 -,frc - chr3L_11_17425001 chr3L_17425001 RAL-426 1799 chr3L 17475893 17475943 chr3L 17475990 17476032 12 92 2.5 2.0 2.2 3.8 139 chr3L 17475893 3` UTR CG7580 + chr3L 17475962 3` UTR CG7580 + chr3L 17476032 3` UTR CG7580 + chr3L_12_17475001 chr3L_17475001 RAL-426 1800 chr3L 17484599 17484619 chr3L 17486262 17486282 6 1665 18.5 27.5 23.0 0.2 1683 chr3L 17484599 intron CG6333 - chr3L 17485440 intron CG6333 - chr3L 17486282 intergenic CG6333 - chr3L_6_17485001 chr3L_17485001 RAL-426 1801 chr3L 17510736 17510766 chr3L 17510822 17510870 7 101 2.0 3.0 2.5 2.0 134 chr3L 17510736 exon Oatp74D + chr3L 17510803 intron Oatp74D + chr3L 17510870 intron Oatp74D + chr3L_7_17510001 chr3L_17510001 RAL-426 1802 chr3L 17516970 17517013 chr3L 17524543 17524544 412 7 7567 3.5 6.5 5.0 1.2 7574 chr3L 17516970 intron CG7564 + chr3L 17520757 intron CG7564 + chr3L 17524544 3` UTR CG7564 + chr3L_7_17520001 chr3L_17520001 RAL-426 1803 chr3L 17578521 17578543 chr3L 17578642 17578653 6 119 5.5 0.0 2.8 1.6 132 chr3L 17578521 intron Eip74EF - chr3L 17578587 intron Eip74EF - chr3L 17578653 intron Eip74EF - chr3L_6_17575001 chr3L_17575001 RAL-426 1804 chr3L 17586945 17587001 chr3L 17587099 17587118 9 149 3.5 1.5 2.5 2.6 173 chr3L 17586945 intron Eip74EF - chr3L 17587032 intron Eip74EF - chr3L 17587118 intron Eip74EF - chr3L_9_17585001 chr3L_17585001 RAL-426 1805 chr3L 17594220 17594274 chr3L 17594321 17594375 15 95 1.5 4.5 3.0 3.8 155 chr3L 17594220 intron Eip74EF - chr3L 17594298 intron Eip74EF - chr3L 17594375 intron Eip74EF - chr3L_15_17590001 chr3L_17590001 RAL-426 1806 chr3L 17696822 17696848 chr3L 17696904 17696911 7 83 2.5 8.0 5.2 1.1 89 chr3L 17696822 intron Ccn + chr3L 17696866 intron Ccn + chr3L 17696911 intron Ccn + chr3L_7_17695001 chr3L_17695001 RAL-426 1807 chr3L 17730836 17730871 chr3L 17738185 17738216 mdg1 8 7343 1.0 1.5 1.2 3.6 7380 chr3L 17730836 intron Ccn + chr3L 17734526 intron Ccn + chr3L 17738216 intron Ccn + chr3L_8_17730001 chr3L_17730001 RAL-426 1808 chr3L 17743978 17744009 chr3L 17745767 17745798 11 1785 27.0 26.0 26.5 0.4 1820 chr3L 17743978 intron Ccn + chr3L 17744888 intron Ccn + chr3L 17745798 intron,exon Ccn +,CG6034 - chr3L_11_17740001 chr3L_17740001 RAL-426 1809 chr3L 17743934 17743966 chr3L 17746192 17746223 9 2258 23.5 38.5 31.0 0.3 2289 chr3L 17743934 intron Ccn + chr3L 17745078 intron Ccn + chr3L 17746223 intron,exon Ccn +,CG6034 - chr3L_9_17745001 chr3L_17745001 RAL-426 1810 chr3L 17787666 17787695 chr3L 17787779 17787805 9 112 4.5 4.5 4.5 1.6 139 chr3L 17787666 intergenic not near genes chr3L 17787736 intergenic not near genes chr3L 17787805 intergenic not near genes chr3L_9_17785001 chr3L_17785001 RAL-426 1811 chr3L 17790189 17790198 chr3L 17790317 17790328 5 129 10.0 6.5 8.2 0.5 139 chr3L 17790189 intergenic not near genes chr3L 17790258 intergenic not near genes chr3L 17790328 intergenic not near genes chr3L_5_17790001 chr3L_17790001 RAL-426 1812 chr3L 17790202 17790203 chr3L 17790315 17790336 5 126 8.5 6.5 7.5 0.6 134 chr3L 17790202 intergenic not near genes chr3L 17790269 intergenic not near genes chr3L 17790336 intergenic not near genes chr3L_5_17790001 chr3L_17790001 RAL-426 1813 chr3L 17790205 17790230 chr3L 17790307 17790310 13 114 3.5 5.5 4.5 2.4 105 chr3L 17790205 intergenic not near genes chr3L 17790258 intergenic not near genes chr3L 17790310 intergenic not near genes chr3L_13_17790001 chr3L_17790001 RAL-426 1814 chr3L 17790471 17790609 chr3L 17790596 17790894 6 232 0.0 0.0 0.0 6.0 423 chr3L 17790471 intergenic not near genes chr3L 17790682 intergenic CG42815 - chr3L 17790894 intergenic CG42815 - chr3L_6_17790001 chr3L_17790001 RAL-426 1815 chr3L 17790613 17790634 chr3L 17790898 17790918 4 285 0.0 3.5 1.8 1.4 305 chr3L 17790613 intergenic CG42815 - chr3L 17790766 intergenic CG42815 - chr3L 17790918 intergenic CG42815 - chr3L_4_17790001 chr3L_17790001 RAL-426 1816 chr3L 17799794 17799839 chr3L 17801600 17801646 S-element 8 1806 2.5 2.0 2.2 2.5 1852 chr3L 17799794 intron NUCB1 - chr3L 17800720 intron NUCB1 - chr3L 17801646 intron NUCB1 - chr3L_8_17800001 chr3L_17800001 RAL-426 1817 chr3L 17938586 17938628 chr3L 17938698 17938724 8 110 4.0 1.0 2.5 2.3 138 chr3L 17938586 intron CG43174 + chr3L 17938655 intron CG43174 + chr3L 17938724 intron CG43174 + chr3L_8_17935001 chr3L_17935001 RAL-426 1818 chr3L 17948169 17948195 chr3L 17948240 17948291 8 88 1.0 0.5 0.8 4.4 122 chr3L 17948169 intergenic CR45393 - chr3L 17948230 intergenic not near genes chr3L 17948291 intergenic not near genes chr3L_8_17945001 chr3L_17945001 RAL-426 1819 chr3L 17990094 17990133 chr3L 17990185 17990199 9 89 6.0 4.0 5.0 1.5 105 chr3L 17990094 intron Eip75B - chr3L 17990146 intron Eip75B - chr3L 17990199 intron Eip75B - chr3L_9_17990001 chr3L_17990001 RAL-426 1820 chr3L 17991562 17991585 chr3L 17991660 17991683 4 98 6.0 3.0 4.5 0.7 121 chr3L 17991562 intron Eip75B - chr3L 17991622 intron Eip75B - chr3L 17991683 intron Eip75B - chr3L_4_17990001 chr3L_17990001 RAL-426 1821 chr3L 18006204 18006255 chr3L 18006348 18006355 15 139 2.0 7.5 4.8 2.6 151 chr3L 18006204 intron Eip75B - chr3L 18006280 intron Eip75B - chr3L 18006355 intron Eip75B - chr3L_15_18005001 chr3L_18005001 RAL-426 1822 chr3L 18020549 18020585 chr3L 18020675 18020704 8 125 2.5 0.0 1.2 3.6 155 chr3L 18020549 intron Eip75B - chr3L 18020626 intron Eip75B - chr3L 18020704 intron Eip75B - chr3L_8_18020001 chr3L_18020001 RAL-426 1823 chr3L 18029938 18029975 chr3L 18030034 18030072 8 96 2.5 0.0 1.2 3.6 134 chr3L 18029938 intron Eip75B - chr3L 18030005 intron Eip75B - chr3L 18030072 intron Eip75B - chr3L_8_18030001 chr3L_18030001 RAL-426 1824 chr3L 18047689 18047740 chr3L 18056765 18056817 roo 8 9072 1.0 1.5 1.2 3.6 9128 chr3L 18047689 intron Eip75B - chr3L 18052253 intron Eip75B - chr3L 18056817 intron Eip75B - chr3L_8_18050001 chr3L_18050001 RAL-426 1825 chr3L 18058114 18058138 chr3L 18058187 18058206 4 73 7.0 1.0 4.0 0.8 92 chr3L 18058114 intron Eip75B - chr3L 18058160 intron Eip75B - chr3L 18058206 intron Eip75B - chr3L_4_18055001 chr3L_18055001 RAL-426 1826 chr3L 18064043 18064069 chr3L 18064148 18064175 4 101 1.0 1.5 1.2 1.8 132 chr3L 18064043 intron Eip75B - chr3L 18064109 intron Eip75B - chr3L 18064175 intron Eip75B - chr3L_4_18060001 chr3L_18060001 RAL-426 1827 chr3L 18092767 18092785 chr3L 18092902 18092916 7 133 7.5 0.0 3.8 1.5 149 chr3L 18092767 intron CG13698 - chr3L 18092842 intron CG13698 - chr3L 18092916 intron CG13698 - chr3L_7_18090001 chr3L_18090001 RAL-426 1828 chr3L 18119614 18119679 chr3L 18119746 18119776 7 117 0.0 4.0 2.0 2.3 162 chr3L 18119614 intron CG7341 + chr3L 18119695 intron CG7341 + chr3L 18119776 intron CG7341 + chr3L_7_18115001 chr3L_18115001 RAL-426 1829 chr3L 18150383 18150416 chr3L 18150504 18150538 5 118 4.0 0.5 2.2 1.6 155 chr3L 18150383 intron CG7330 + chr3L 18150460 intron CG7330 + chr3L 18150538 intron CG7330 + chr3L_5_18150001 chr3L_18150001 RAL-426 1830 chr3L 18189569 18189581 chr3L 18190190 18190199 S-element 4 618 6.0 6.5 6.2 0.6 630 chr3L 18189569 intergenic not near genes chr3L 18189884 intergenic not near genes chr3L 18190199 intergenic not near genes chr3L_4_18185001 chr3L_18185001 RAL-426 1831 chr3L 18214519 18214552 chr3L 18214615 18214648 4 95 3.0 4.5 3.8 0.8 129 chr3L 18214519 intergenic not near genes chr3L 18214584 intergenic not near genes chr3L 18214648 intergenic not near genes chr3L_4_18210001 chr3L_18210001 RAL-426 1832 chr3L 18223143 18223188 chr3L 18223246 18223301 11 104 5.0 0.0 2.5 3.1 158 chr3L 18223143 intergenic not near genes chr3L 18223222 intergenic not near genes chr3L 18223301 intergenic not near genes chr3L_11_18220001 chr3L_18220001 RAL-426 1833 chr3L 18262452 18262473 chr3L 18262554 18262576 8 103 2.5 3.0 2.8 2.1 124 chr3L 18262452 intergenic not near genes chr3L 18262514 intergenic not near genes chr3L 18262576 intergenic not near genes chr3L_8_18260001 chr3L_18260001 RAL-426 1834 chr3L 18306939 18306984 chr3L 18307037 18307083 12 100 4.5 2.5 3.5 2.7 144 chr3L 18306939 intergenic not near genes chr3L 18307011 intergenic not near genes chr3L 18307083 intergenic not near genes chr3L_12_18305001 chr3L_18305001 RAL-426 1835 chr3L 9013689 9013690 chr3L 18417066 18417066 4 9403376 19.0 16.0 17.5 0.2 9403377 chr3L 9013689 intron Doc2 - chr3L 13715378 intron bru-3 - chr3L 18417066 intergenic not near genes chr3L_4_13715001 chr3L_13715001 RAL-426 1836 chr3L 18456289 18456303 chr3L 18456397 18456411 5 107 6.0 11.0 8.5 0.5 122 chr3L 18456289 intergenic CR44670 - chr3L 18456350 intergenic CR44670 - chr3L 18456411 3` UTR CR44670 - chr3L_5_18455001 chr3L_18455001 RAL-426 1837 chr3L 18506124 18506160 chr3L 18509602 18509643 F-element 6 3480 4.0 3.5 3.8 1.2 3519 chr3L 18506124 intergenic not near genes chr3L 18507884 intergenic not near genes chr3L 18509643 intergenic not near genes chr3L_6_18505001 chr3L_18505001 RAL-426 1838 chr3L 18528612 18528658 chr3L 18537793 18537838 roo 11 9181 2.5 1.0 1.8 3.9 9226 chr3L 18528612 intergenic not near genes chr3L 18533225 intergenic not near genes chr3L 18537838 intergenic not near genes chr3L_11_18530001 chr3L_18530001 RAL-426 1839 chr3L 18572487 18572535 chr3L 18572597 18572645 10 110 3.0 1.0 2.0 3.3 158 chr3L 18572487 intron AstC-R1 + chr3L 18572566 intron AstC-R1 + chr3L 18572645 intron AstC-R1 + chr3L_10_18570001 chr3L_18570001 RAL-426 1840 chr3L 18581310 18581360 chr3L 18581406 18581428 10 93 1.5 2.0 1.8 3.6 118 chr3L 18581310 intergenic not near genes chr3L 18581369 intergenic not near genes chr3L 18581428 intergenic not near genes chr3L_10_18580001 chr3L_18580001 RAL-426 1841 chr3L 18582194 18582246 chr3L 18582299 18582351 10 102 4.5 3.0 3.8 2.1 157 chr3L 18582194 intergenic not near genes chr3L 18582272 intergenic not near genes chr3L 18582351 intergenic not near genes chr3L_10_18580001 chr3L_18580001 RAL-426 1842 chr3L 18593930 18593956 chr3L 18595926 18595956 Doc 5 1999 3.5 1.0 2.2 1.6 2026 chr3L 18593930 intergenic term - chr3L 18594943 intergenic not near genes chr3L 18595956 intergenic CR45389 + chr3L_5_18590001 chr3L_18590001 RAL-426 1843 chr3L 18665193 18665222 chr3L 18665298 18665318 6 103 3.0 0.0 1.5 2.4 125 chr3L 18665193 intron MYPT-75D + chr3L 18665256 intron MYPT-75D + chr3L 18665318 intron MYPT-75D + chr3L_6_18665001 chr3L_18665001 RAL-426 1844 chr3L 18677870 18677916 chr3L 18677985 18678027 11 110 2.5 4.5 3.5 2.4 157 chr3L 18677870 3` UTR GNBP1 + chr3L 18677948 intergenic GNBP1 + chr3L 18678027 intergenic GNBP1 + chr3L_11_18675001 chr3L_18675001 RAL-426 1845 chr3L 18679077 18679125 chr3L 18679186 18679194 6 97 3.5 3.5 3.5 1.3 117 chr3L 18679077 intergenic not near genes chr3L 18679136 intergenic not near genes chr3L 18679194 intergenic not near genes chr3L_6_18675001 chr3L_18675001 RAL-426 1846 chr3L 18701112 18701152 chr3L 18701219 18701258 13 103 8.0 4.0 6.0 1.9 146 chr3L 18701112 intergenic not near genes chr3L 18701185 intergenic not near genes chr3L 18701258 intergenic not near genes chr3L_13_18700001 chr3L_18700001 RAL-426 1847 chr3L 18710744 18710789 chr3L 18718715 18718761 Stalker2 6 7970 2.0 1.0 1.5 2.4 8017 chr3L 18710744 intergenic not near genes chr3L 18714752 intergenic not near genes chr3L 18718761 intergenic not near genes chr3L_6_18710001 chr3L_18710001 RAL-426 1848 chr3L 18739112 18739152 chr3L 18739213 18739254 8 100 1.5 4.0 2.8 2.1 142 chr3L 18739112 intergenic not near genes chr3L 18739183 intergenic not near genes chr3L 18739254 intergenic not near genes chr3L_8_18735001 chr3L_18735001 RAL-426 1849 chr3L 18772391 18772403 chr3L 18781092 18781103 roo 5 8701 8.0 6.5 7.2 0.6 8712 chr3L 18772391 intron ftz-f1 - chr3L 18776747 intron ftz-f1 - chr3L 18781103 intron ftz-f1 - chr3L_5_18775001 chr3L_18775001 RAL-426 1850 chr3L 18772404 18772436 chr3L 18781088 18781137 roo 11 8695 3.5 6.0 4.8 1.9 8733 chr3L 18772404 intron ftz-f1 - chr3L 18776770 intron ftz-f1 - chr3L 18781137 intron ftz-f1 - chr3L_11_18775001 chr3L_18775001 RAL-426 1851 chr3L 18784378 18784406 chr3L 18784487 18784515 4 108 3.0 3.5 3.2 1.0 137 chr3L 18784378 intron ftz-f1 - chr3L 18784446 intron ftz-f1 - chr3L 18784515 intron ftz-f1 - chr3L_4_18780001 chr3L_18780001 RAL-426 1852 chr3L 18797309 18797337 chr3L 18797396 18797441 7 100 0.5 2.5 1.5 2.8 132 chr3L 18797309 intron ftz-f1 - chr3L 18797375 intron ftz-f1 - chr3L 18797441 intron ftz-f1 - chr3L_7_18795001 chr3L_18795001 RAL-426 1853 chr3L 18843854 18843894 chr3L 18843964 18843997 7 109 3.0 5.5 4.2 1.3 143 chr3L 18843854 intron Indy - chr3L 18843926 intron Indy - chr3L 18843997 intron Indy - chr3L_7_18840001 chr3L_18840001 RAL-426 1854 chr3L 18924464 18924502 chr3L 18924559 18924598 5 96 3.5 1.5 2.5 1.4 134 chr3L 18924464 intron CG32204 - chr3L 18924531 intron CG32204 - chr3L 18924598 intron CG32204 - chr3L_5_18920001 chr3L_18920001 RAL-426 1855 chr3L 18929968 18929982 chr3L 18930044 18930086 7 97 1.5 5.5 3.5 1.6 118 chr3L 18929968 intron CG32204 - chr3L 18930027 intron CG32204 - chr3L 18930086 exon CG32204 - chr3L_7_18930001 chr3L_18930001 RAL-426 1856 chr3L 18933075 18933117 chr3L 18933180 18933222 9 104 4.0 2.5 3.2 2.1 147 chr3L 18933075 intron CG32204 - chr3L 18933148 intron CG32204 - chr3L 18933222 intron CG32204 - chr3L_9_18930001 chr3L_18930001 RAL-426 1857 chr3L 18959978 18960027 chr3L 18960079 18960128 7 100 1.5 2.0 1.8 2.5 150 chr3L 18959978 intergenic not near genes chr3L 18960053 intergenic not near genes chr3L 18960128 intergenic not near genes chr3L_7_18960001 chr3L_18960001 RAL-426 1858 chr3L 18969576 18969629 chr3L 18969692 18969697 15 109 3.0 4.0 3.5 3.3 121 chr3L 18969576 intergenic not near genes chr3L 18969636 intergenic not near genes chr3L 18969697 intergenic not near genes chr3L_15_18965001 chr3L_18965001 RAL-426 1859 chr3L 19008829 19008870 chr3L 19009187 19009228 jockey 8 357 3.0 6.0 4.5 1.5 399 chr3L 19008829 intron nkd - chr3L 19009028 intron nkd - chr3L 19009228 intron nkd - chr3L_8_19005001 chr3L_19005001 RAL-426 1860 chr3L 19025936 19025970 chr3L 19026040 19026075 7 103 3.0 0.5 1.8 2.5 139 chr3L 19025936 intron nkd - chr3L 19026006 intron nkd - chr3L 19026075 intron nkd - chr3L_7_19025001 chr3L_19025001 RAL-426 1861 chr3L 19082020 19082042 chr3L 19082142 19082151 8 119 7.5 4.5 6.0 1.1 131 chr3L 19082020 intron Mkp3 - chr3L 19082086 intron Mkp3 - chr3L 19082151 intron Mkp3 - chr3L_8_19080001 chr3L_19080001 RAL-426 1862 chr3L 19117030 19117072 chr3L 19124496 19124500 mdg1 13 7458 6.0 6.0 6.0 1.9 7470 chr3L 19117030 intron CG14082 - chr3L 19120765 intron CG14082 - chr3L 19124500 intron CG14082 - chr3L_13_19120001 chr3L_19120001 RAL-426 1863 chr3L 19135590 19135595 chr3L 19135715 19135718 4 124 5.0 2.0 3.5 0.9 128 chr3L 19135590 intron CG14082 - chr3L 19135654 intron CG14082 - chr3L 19135718 intron CG14082 - chr3L_4_19135001 chr3L_19135001 RAL-426 1864 chr3L 19135598 19135638 chr3L 19135714 19135763 13 124 2.0 2.0 2.0 4.3 165 chr3L 19135598 intron CG14082 - chr3L 19135680 intron CG14082 - chr3L 19135763 intron CG14082 - chr3L_13_19135001 chr3L_19135001 RAL-426 1865 chr3L 19182372 19182414 chr3L 19182467 19182513 9 96 2.0 3.5 2.8 2.4 141 chr3L 19182372 intron fz2 - chr3L 19182442 intron fz2 - chr3L 19182513 intron fz2 - chr3L_9_19180001 chr3L_19180001 RAL-426 1866 chr3L 19208052 19208065 chr3L 19209444 19209459 Doc 6 1391 6.5 4.5 5.5 0.9 1407 chr3L 19208052 intron fz2 - chr3L 19208756 intron fz2 - chr3L 19209459 intron fz2 - chr3L_6_19205001 chr3L_19205001 RAL-426 1867 chr3L 19220633 19220633 chr3L 22908066 22908067 8 3687433 21.5 26.0 23.8 0.3 3687434 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_8_21060001 chr3L_21060001 RAL-426 1868 chr3L 19220634 19220635 chr3L 22908066 22908067 4 3687432 21.5 26.0 23.8 0.2 3687433 chr3L 19220634 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_4_21060001 chr3L_21060001 RAL-426 1869 chr3L 19323578 19323627 chr3L 19323759 19323810 12 181 2.0 6.0 4.0 2.4 232 chr3L 19323578 intron pip - chr3L 19323694 intron pip - chr3L 19323810 intron pip - chr3L_12_19320001 chr3L_19320001 RAL-426 1870 chr3L 19343600 19343622 chr3L 19343741 19343778 5 153 1.0 4.0 2.5 1.4 178 chr3L 19343600 exon CG32206 - chr3L 19343689 intron CG32206 - chr3L 19343778 intron CG32206 - chr3L_5_19340001 chr3L_19340001 RAL-426 1871 chr3L 19365920 19365924 chr3L 19366035 19366041 6 116 0.0 9.0 4.5 1.1 121 chr3L 19365920 intron CG32206 - chr3L 19365980 intron CG32206 - chr3L 19366041 intron CG32206 - chr3L_6_19365001 chr3L_19365001 RAL-426 1872 chr3L 19379177 19379182 chr3L 19379284 19379289 5 107 6.0 5.0 5.5 0.8 112 chr3L 19379177 intron CG32206 - chr3L 19379233 intron CG32206 - chr3L 19379289 intron CG32206 - chr3L_5_19375001 chr3L_19375001 RAL-426 1873 chr3L 19488485 19488496 chr3L 19488580 19488591 4 98 8.5 5.0 6.8 0.5 106 chr3L 19488485 intergenic pncr009:3L -,CG32212 + chr3L 19488538 intergenic pncr009:3L -,CG32212 + chr3L 19488591 intergenic pncr009:3L -,CG32212 + chr3L_4_19485001 chr3L_19485001 RAL-426 1874 chr3L 19544218 19544259 chr3L 19544314 19544351 8 95 2.0 1.5 1.8 2.9 133 chr3L 19544218 intergenic CG9279 -,l(3)76BDr - chr3L 19544284 intergenic l(3)76BDr -,CG9279 - chr3L 19544351 3` UTR l(3)76BDr - chr3L_8_19540001 chr3L_19540001 RAL-426 1875 chr3L 19554796 19554852 chr3L 19554911 19554965 14 113 2.0 2.5 2.2 4.4 169 chr3L 19554796 intergenic CG9300 + chr3L 19554880 intergenic CG9300 + chr3L 19554965 intergenic CG9300 + chr3L_14_19550001 chr3L_19550001 RAL-426 1876 chr3L 19792355 19792370 chr3L 19792470 19792484 5 115 2.5 5.0 3.8 1.0 129 chr3L 19792355 intron,intron CG42637 -,Gyc76C - chr3L 19792420 intron,intron CG42637 -,Gyc76C - chr3L 19792484 intron,intron CG42637 -,Gyc76C - chr3L_5_19790001 chr3L_19790001 RAL-426 1877 chr3L 19820281 19820312 chr3L 19827850 19827881 412 8 7569 4.5 1.0 2.8 2.1 7600 chr3L 19820281 intron Deaf1 + chr3L 19824081 intron Deaf1 + chr3L 19827881 intron Deaf1 + chr3L_8_19820001 chr3L_19820001 RAL-426 1878 chr3L 19848490 19848531 chr3L 19857700 19857740 roo 9 9207 6.5 4.0 5.2 1.5 9250 chr3L 19848490 intron Papss + chr3L 19853115 intron Papss + chr3L 19857740 intron Papss + chr3L_9_19850001 chr3L_19850001 RAL-426 1879 chr3L 19861811 19861824 chr3L 19863619 19863631 S-element 4 1807 4.5 4.5 4.5 0.7 1820 chr3L 19861811 5` UTR CR45433 + chr3L 19862721 intergenic not near genes chr3L 19863631 intergenic not near genes chr3L_4_19860001 chr3L_19860001 RAL-426 1880 chr3L 19933516 19933552 chr3L 19934358 19934394 15 840 8.5 1.0 4.8 2.6 878 chr3L 19933516 intergenic CR45678 + chr3L 19933955 5` UTR CR45678 + chr3L 19934394 intergenic CR45678 + chr3L_15_19930001 chr3L_19930001 RAL-426 1881 chr3L 19961244 19961383 chr3L 19961336 19961436 21 89 0.5 0.5 0.5 14.0 192 chr3L 19961244 intron Ac76E + chr3L 19961340 intron Ac76E + chr3L 19961436 intron Ac76E + chr3L_21_19960001 chr3L_19960001 RAL-426 1882 chr3L 19972485 19972534 chr3L 19972640 19972668 10 148 3.0 1.5 2.2 3.1 183 chr3L 19972485 intron Ac76E + chr3L 19972576 intron Ac76E + chr3L 19972668 intron Ac76E + chr3L_10_19970001 chr3L_19970001 RAL-426 1883 chr3L 20096066 20096116 chr3L 20096190 20096234 8 114 4.0 0.0 2.0 2.7 168 chr3L 20096066 intergenic not near genes chr3L 20096150 intergenic not near genes chr3L 20096234 intergenic not near genes chr3L_8_20095001 chr3L_20095001 RAL-426 1884 chr3L 20113640 20113686 chr3L 20122917 20122930 roo 6 9269 1.5 4.0 2.8 1.6 9290 chr3L 20113640 intergenic not near genes chr3L 20118285 intergenic not near genes chr3L 20122930 intergenic not near genes chr3L_6_20115001 chr3L_20115001 RAL-426 1885 chr3L 20143067 20143111 chr3L 20143166 20143211 12 100 8.0 2.0 5.0 2.0 144 chr3L 20143067 intergenic not near genes chr3L 20143139 intergenic not near genes chr3L 20143211 intergenic not near genes chr3L_12_20140001 chr3L_20140001 RAL-426 1886 chr3L 20148262 20148318 chr3L 20148372 20148428 10 103 3.5 3.5 3.5 2.2 166 chr3L 20148262 intergenic not near genes chr3L 20148345 intergenic not near genes chr3L 20148428 intergenic not near genes chr3L_10_20145001 chr3L_20145001 RAL-426 1887 chr3L 20162221 20162262 chr3L 20162367 20162406 14 143 7.5 2.0 4.8 2.4 185 chr3L 20162221 intron CG42674 - chr3L 20162314 intron CG42674 - chr3L 20162406 intron CG42674 - chr3L_14_20160001 chr3L_20160001 RAL-426 1888 chr3L 20218216 20218223 chr3L 20218352 20218359 5 136 0.0 8.0 4.0 1.0 143 chr3L 20218216 intergenic CG6933 - chr3L 20218288 intergenic CG6933 - chr3L 20218359 intergenic CG6933 - chr3L_5_20215001 chr3L_20215001 RAL-426 1889 chr3L 20257316 20257363 chr3L 20258456 20258503 pogo 23 1138 2.5 5.0 3.8 4.8 1187 chr3L 20257316 intron rdgC + chr3L 20257910 intron rdgC + chr3L 20258503 intron rdgC + chr3L_23_20255001 chr3L_20255001 RAL-426 1890 chr3L 20283656 20283708 chr3L 20283760 20283808 20 102 1.0 5.5 3.2 4.8 152 chr3L 20283656 intron gogo - chr3L 20283732 intron gogo - chr3L 20283808 intron gogo - chr3L_20_20280001 chr3L_20280001 RAL-426 1891 chr3L 20315650 20315675 chr3L 20315749 20315775 10 100 4.5 8.5 6.5 1.3 125 chr3L 20315650 3` UTR,intron alphaSnap +,CR43875 - chr3L 20315712 3` UTR,intron alphaSnap +,CR43875 - chr3L 20315775 3` UTR,intron alphaSnap +,CR43875 - chr3L_10_20315001 chr3L_20315001 RAL-426 1892 chr3L 20321107 20321117 chr3L 20342901 20342905 17.6 4 21788 11.5 19.5 15.5 0.2 21798 chr3L 20321107 exon Spn77Bb + chr3L 20332006 intergenic not near genes chr3L 20342905 exon Spn77Bc + chr3L_4_20330001 chr3L_20330001 RAL-426 1893 chr3L 20345589 20345634 chr3L 20345689 20345700 15 93 5.5 2.5 4.0 3.0 111 chr3L 20345589 intergenic Rbbp5 - chr3L 20345644 intergenic Rbbp5 - chr3L 20345700 intergenic Rbbp5 - chr3L_15_20345001 chr3L_20345001 RAL-426 1894 chr3L 20405582 20405610 chr3L 20405658 20405687 11 87 2.5 3.5 3.0 2.8 105 chr3L 20405582 intergenic not near genes chr3L 20405634 intergenic not near genes chr3L 20405687 intergenic not near genes chr3L_11_20405001 chr3L_20405001 RAL-426 1895 chr3L 20462573 20462595 chr3L 20462673 20462696 5 101 3.0 3.0 3.0 1.2 123 chr3L 20462573 intron atk - chr3L 20462634 intron atk - chr3L 20462696 intron atk - chr3L_5_20460001 chr3L_20460001 RAL-426 1896 chr3L 20476744 20476784 chr3L 20484352 20484399 springer 14 7617 3.0 4.5 3.8 2.9 7655 chr3L 20476744 3` UTR isoQC + chr3L 20480572 intergenic not near genes chr3L 20484399 3` UTR ZnT77C - chr3L_14_20480001 chr3L_20480001 RAL-426 1897 chr3L 20487646 20487673 chr3L 20488117 20488118 INE-1 12 468 5.5 4.0 4.8 2.1 472 chr3L 20487646 intron ZnT77C - chr3L 20487882 intron ZnT77C - chr3L 20488118 intron ZnT77C - chr3L_12_20485001 chr3L_20485001 RAL-426 1898 chr3L 20548345 20548386 chr3L 20548454 20548495 16 105 5.0 5.0 5.0 2.7 150 chr3L 20548345 intergenic not near genes chr3L 20548420 intergenic not near genes chr3L 20548495 intergenic not near genes chr3L_16_20545001 chr3L_20545001 RAL-426 1899 chr3L 20590089 20590093 chr3L 20590601 20590625 412 4 531 1.5 3.0 2.2 1.2 536 chr3L 20590089 intergenic not near genes chr3L 20590357 intergenic not near genes chr3L 20590625 intergenic not near genes chr3L_4_20590001 chr3L_20590001 RAL-426 1900 chr3L 20710748 20710790 chr3L 20710845 20710887 9 96 3.5 4.0 3.8 1.9 139 chr3L 20710748 intergenic not near genes chr3L 20710818 intergenic not near genes chr3L 20710887 intergenic not near genes chr3L_9_20710001 chr3L_20710001 RAL-426 1901 chr3L 20821279 20821309 chr3L 20824767 20824798 NOF 10 3485 2.0 3.5 2.8 2.6 3519 chr3L 20821279 intron Pka-R1 + chr3L 20823038 intron Pka-R1 + chr3L 20824798 intron Pka-R1 + chr3L_10_20820001 chr3L_20820001 RAL-426 1902 chr3L 20849258 20849300 chr3L 20849357 20849399 10 99 4.0 3.0 3.5 2.2 141 chr3L 20849258 intron CG32432 - chr3L 20849328 intron CG32432 - chr3L 20849399 intron CG32432 - chr3L_10_20845001 chr3L_20845001 RAL-426 1903 chr3L 20858057 20858090 chr3L 20858176 20858209 5 119 6.0 3.5 4.8 0.9 152 chr3L 20858057 intron CG32432 - chr3L 20858133 intron CG32432 - chr3L 20858209 intron CG32432 - chr3L_5_20855001 chr3L_20855001 RAL-426 1904 chr3L 21010371 21010399 chr3L 21010480 21010516 5 113 5.0 4.0 4.5 0.9 145 chr3L 21010371 intron skd - chr3L 21010444 intron skd - chr3L 21010516 intron skd - chr3L_5_21010001 chr3L_21010001 RAL-426 1905 chr3L 21014901 21014946 chr3L 21023396 21023421 Tirant 13 8492 4.0 5.0 4.5 2.4 8520 chr3L 21014901 intron skd - chr3L 21019161 intron skd - chr3L 21023421 intron skd - chr3L_13_21015001 chr3L_21015001 RAL-426 1906 chr3L 21151848 21151897 chr3L 21156952 21157001 flea 14 5104 3.5 3.0 3.2 3.3 5153 chr3L 21151848 intron Ac78C - chr3L 21154424 intron Ac78C - chr3L 21157001 intron Ac78C - chr3L_14_21150001 chr3L_21150001 RAL-426 1907 chr3L 21243749 21243777 chr3L 21251312 21251327 412 7 7555 1.5 5.0 3.2 1.7 7578 chr3L 21243749 intron Eip78C + chr3L 21247538 intron Eip78C + chr3L 21251327 intron Eip78C + chr3L_7_21245001 chr3L_21245001 RAL-426 1908 chr3L 21306128 21306176 chr3L 21315307 21315355 roo 8 9179 3.5 1.5 2.5 2.3 9227 chr3L 21306128 3` UTR CG7632 + chr3L 21310742 intron Pc - chr3L 21315355 3` UTR Pc - chr3L_8_21310001 chr3L_21310001 RAL-426 1909 chr3L 21319509 21319557 chr3L 21319619 21319664 19 105 8.0 6.0 7.0 2.4 155 chr3L 21319509 5` UTR Rab26 + chr3L 21319586 5` UTR Rab26 + chr3L 21319664 5` UTR Rab26 + chr3L_19_21315001 chr3L_21315001 RAL-426 1910 chr3L 21408444 21408490 chr3L 21408539 21408588 12 96 1.5 4.0 2.8 3.2 144 chr3L 21408444 intron rgn + chr3L 21408516 intron rgn + chr3L 21408588 intron rgn + chr3L_12_21405001 chr3L_21405001 RAL-426 1911 chr3L 21414517 21414532 chr3L 21414613 21414628 5 96 3.0 5.0 4.0 1.0 111 chr3L 21414517 intron rgn + chr3L 21414572 intron rgn + chr3L 21414628 intron rgn + chr3L_5_21410001 chr3L_21410001 RAL-426 1912 chr3L 21498825 21498858 chr3L 21500479 21500512 1360 4 1647 7.5 7.0 7.2 0.5 1687 chr3L 21498825 5` UTR,intron CR43933 +,Glg1 - chr3L 21499668 intron Glg1 - chr3L 21500512 intron Glg1 - chr3L_4_21495001 chr3L_21495001 RAL-426 1913 chr3L 21501153 21501171 chr3L 21501267 21501284 1360 5 114 1.5 7.5 4.5 0.9 131 chr3L 21501153 intron Glg1 - chr3L 21501218 intron Glg1 - chr3L 21501284 intron Glg1 - chr3L_5_21500001 chr3L_21500001 RAL-426 1914 chr3L 21637309 21637352 chr3L 21637416 21637459 17 105 6.5 5.5 6.0 2.4 150 chr3L 21637309 exon CG32444 + chr3L 21637384 intron CG32444 + chr3L 21637459 intron CG32444 + chr3L_17_21635001 chr3L_21635001 RAL-426 1915 chr3L 21639178 21639226 chr3L 21639277 21639325 14 96 6.0 3.5 4.8 2.4 147 chr3L 21639178 intergenic CG32444 +,CG32445 + chr3L 21639252 intergenic CG32445 +,CG32444 + chr3L 21639325 intergenic CG32445 +,CG32444 + chr3L_14_21635001 chr3L_21635001 RAL-426 1916 chr3L 21749306 21749343 chr3L 21754475 21754491 Doc 10 5165 5.0 5.0 5.0 1.7 5185 chr3L 21749306 intron Syn1 - chr3L 21751898 intron Syn1 - chr3L 21754491 intron Syn1 - chr3L_10_21750001 chr3L_21750001 RAL-426 1917 chr3L 21836712 21836719 chr3L 21836811 21836825 6 104 9.0 4.0 6.5 0.8 113 chr3L 21836712 3` UTR P5CDh1 - chr3L 21836768 3` UTR P5CDh1 - chr3L 21836825 3` UTR P5CDh1 - chr3L_6_21835001 chr3L_21835001 RAL-426 1918 chr3L 21836725 21836758 chr3L 21836810 21836864 4 97 4.0 4.0 4.0 0.8 139 chr3L 21836725 3` UTR P5CDh1 - chr3L 21836794 3` UTR P5CDh1 - chr3L 21836864 3` UTR P5CDh1 - chr3L_4_21835001 chr3L_21835001 RAL-426 1919 chr3L 21852269 21852297 chr3L 21852358 21852384 5 91 8.0 3.5 5.8 0.7 115 chr3L 21852269 intron mub + chr3L 21852326 intron mub + chr3L 21852384 intron mub + chr3L_5_21850001 chr3L_21850001 RAL-426 1920 chr3L 21874985 21875025 chr3L 21875158 21875202 6 176 0.0 1.5 0.8 3.3 217 chr3L 21874985 intron mub + chr3L 21875094 intron mub + chr3L 21875202 intron mub + chr3L_6_21875001 chr3L_21875001 RAL-426 1921 chr3L 21901004 21901039 chr3L 21901117 21901152 8 110 5.0 5.5 5.2 1.3 148 chr3L 21901004 intron mub + chr3L 21901078 intron mub + chr3L 21901152 intron mub + chr3L_8_21900001 chr3L_21900001 RAL-426 1922 chr3L 21989798 21989848 chr3L 21989907 21989960 14 109 3.0 4.5 3.8 2.9 162 chr3L 21989798 intergenic not near genes chr3L 21989879 intergenic not near genes chr3L 21989960 intergenic not near genes chr3L_14_21985001 chr3L_21985001 RAL-426 1923 chr3L 22002281 22002334 chr3L 22003262 22003289 10 975 2.0 2.0 2.0 3.3 1008 chr3L 22002281 intergenic not near genes chr3L 22002785 intergenic not near genes chr3L 22003289 intergenic not near genes chr3L_10_22000001 chr3L_22000001 RAL-426 1924 chr3L 22016376 22016395 chr3L 22016483 22016531 5 116 4.5 2.5 3.5 1.1 155 chr3L 22016376 intergenic not near genes chr3L 22016454 intergenic not near genes chr3L 22016531 intergenic not near genes chr3L_5_22015001 chr3L_22015001 RAL-426 1925 chr3L 22023195 22023237 chr3L 22023307 22023324 10 108 1.0 4.5 2.8 2.6 129 chr3L 22023195 intergenic not near genes chr3L 22023260 intergenic not near genes chr3L 22023324 intergenic not near genes chr3L_10_22020001 chr3L_22020001 RAL-426 1926 chr3L 22046167 22046215 chr3L 22046284 22046338 18 122 3.5 3.0 3.2 4.3 171 chr3L 22046167 intron Oct-TyrR + chr3L 22046252 intron Oct-TyrR + chr3L 22046338 intron Oct-TyrR + chr3L_18_22045001 chr3L_22045001 RAL-426 1927 chr3L 22099660 22099705 chr3L 22105864 22105895 3S18 9 6202 3.0 4.5 3.8 1.9 6235 chr3L 22099660 intergenic not near genes chr3L 22102778 intergenic not near genes chr3L 22105895 intergenic not near genes chr3L_9_22100001 chr3L_22100001 RAL-426 1928 chr3L 22120046 22120084 chr3L 22120173 22120215 8 131 5.0 4.5 4.8 1.4 169 chr3L 22120046 intergenic not near genes chr3L 22120130 intergenic not near genes chr3L 22120215 intergenic not near genes chr3L_8_22120001 chr3L_22120001 RAL-426 1929 chr3L 22137516 22137555 chr3L 22137598 22137650 10 92 3.5 4.5 4.0 2.0 134 chr3L 22137516 intron olf413 + chr3L 22137583 intron olf413 + chr3L 22137650 intron olf413 + chr3L_10_22135001 chr3L_22135001 RAL-426 1930 chr3L 22169451 22169479 chr3L 22169564 22169592 11 110 2.5 11.5 7.0 1.4 141 chr3L 22169451 intron olf413 + chr3L 22169522 intron olf413 + chr3L 22169592 intron olf413 + chr3L_11_22165001 chr3L_22165001 RAL-426 1931 chr3L 22169481 22169487 chr3L 22169559 22169597 4 102 1.5 10.0 5.8 0.6 116 chr3L 22169481 intron olf413 + chr3L 22169539 intron olf413 + chr3L 22169597 intron olf413 + chr3L_4_22165001 chr3L_22165001 RAL-426 1932 chr3L 22361935 22361966 chr3L 22362032 22362063 8 96 6.5 4.0 5.2 1.3 128 chr3L 22361935 intron Ten-m - chr3L 22361999 intron Ten-m - chr3L 22362063 intron Ten-m - chr3L_8_22360001 chr3L_22360001 RAL-426 1933 chr3L 22395603 22395624 chr3L 22395677 22395700 6 87 4.5 2.0 3.2 1.4 97 chr3L 22395603 intron Ten-m - chr3L 22395652 intron Ten-m - chr3L 22395700 intron Ten-m - chr3L_6_22395001 chr3L_22395001 RAL-426 1934 chr3L 22507125 22507141 chr3L 22507213 22507241 6 102 6.0 6.0 6.0 0.9 116 chr3L 22507125 intergenic not near genes chr3L 22507183 intergenic not near genes chr3L 22507241 intergenic not near genes chr3L_6_22505001 chr3L_22505001 RAL-426 1935 chr3L 22507146 22507153 chr3L 22507209 22507260 4 82 3.5 4.5 4.0 0.8 114 chr3L 22507146 intergenic not near genes chr3L 22507203 intergenic not near genes chr3L 22507260 intergenic not near genes chr3L_4_22505001 chr3L_22505001 RAL-426 1936 chr3L 22523545 22523558 chr3L 22523721 22523728 4 182 4.5 5.0 4.8 0.7 183 chr3L 22523545 intergenic not near genes chr3L 22523636 intergenic not near genes chr3L 22523728 intergenic not near genes chr3L_4_22520001 chr3L_22520001 RAL-426 1937 chr3L 22523559 22523563 chr3L 22523718 22523755 4 174 3.5 5.0 4.2 0.8 196 chr3L 22523559 intergenic not near genes chr3L 22523657 intergenic not near genes chr3L 22523755 intergenic not near genes chr3L_4_22520001 chr3L_22520001 RAL-426 1938 chr3L 22555750 22555802 chr3L 22563238 22563271 blood 15 7481 4.5 3.5 4.0 3.0 7521 chr3L 22555750 intergenic not near genes chr3L 22559510 intergenic not near genes chr3L 22563271 intergenic not near genes chr3L_15_22555001 chr3L_22555001 RAL-426 1939 chr3L 22577632 22577651 chr3L 22582405 22582426 Doc 7 4781 0.5 4.0 2.2 2.2 4794 chr3L 22577632 intergenic not near genes chr3L 22580029 intergenic not near genes chr3L 22582426 3` UTR CG14459 - chr3L_7_22580001 chr3L_22580001 RAL-426 1940 chr3L 22617169 22617222 chr3L 22624641 22624641 blood 12 7464 3.0 3.0 3.0 3.0 7472 chr3L 22617169 intron CG14459 - chr3L 22620905 intron CG14459 - chr3L 22624641 intron CG14459 - chr3L_12_22620001 chr3L_22620001 RAL-426 1941 chr3L 22761368 22761415 chr3L 22766822 22766869 Ivk 14 5450 2.0 6.0 4.0 2.8 5501 chr3L 22761368 intron SPoCk + chr3L 22764118 intron SPoCk + chr3L 22766869 intron SPoCk + chr3L_14_22760001 chr3L_22760001 RAL-426 1942 chr3L 22838571 22838613 chr3L 22838670 22838710 10 95 7.5 2.5 5.0 1.7 139 chr3L 22838571 intergenic CG11226 + chr3L 22838640 intergenic CG11226 + chr3L 22838710 intergenic not near genes chr3L_10_22835001 chr3L_22835001 RAL-426 1943 chr3L 22853445 22853722 chr3L 22853548 22853827 22 102 3.5 5.5 4.5 4.0 382 chr3L 22853445 5` UTR,5` UTR CR43426 +,CG32462 - chr3L 22853636 5` UTR CR43426 + chr3L 22853827 5` UTR CR43426 + chr3L_22_22850001 chr3L_22850001 RAL-426 1944 chr3L 22865971 22866005 chr3L 22867124 22867155 Doc 9 1152 7.5 6.0 6.8 1.2 1184 chr3L 22865971 intron CG33170 + chr3L 22866563 intron CG33170 + chr3L 22867155 intron CG33170 + chr3L_9_22865001 chr3L_22865001 RAL-426 1945 chr3L 9307795 9307796 chr3L 22908066 22908066 4 13600270 20.5 26.0 23.2 0.2 13600271 chr3L 9307795 intergenic not near genes chr3L 16107930 intron Zn72D - chr3L 22908066 intergenic not near genes chr3L_4_16105001 chr3L_16105001 RAL-426 1946 chr3L 19220633 19220636 chr3L 22908066 22908066 5 3687432 21.5 26.0 23.8 0.2 3687433 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_5_21060001 chr3L_21060001 RAL-426 1947 chr3L 22920921 22920949 chr3L 22921027 22921029 5 99 2.5 3.0 2.8 1.3 108 chr3L 22920921 intron CG12768 + chr3L 22920975 intron CG12768 + chr3L 22921029 intron CG12768 + chr3L_5_22920001 chr3L_22920001 RAL-426 1948 chr3L 22924932 22924974 chr3L 22925023 22925024 6 78 2.5 1.0 1.8 2.1 92 chr3L 22924932 intergenic not near genes chr3L 22924978 intergenic not near genes chr3L 22925024 intergenic not near genes chr3L_6_22920001 chr3L_22920001 RAL-426 1949 chr3L 22974346 22974391 chr3L 22974445 22974489 10 94 3.5 3.5 3.5 2.2 143 chr3L 22974346 intergenic not near genes chr3L 22974418 intergenic not near genes chr3L 22974489 intergenic not near genes chr3L_10_22970001 chr3L_22970001 RAL-426 1950 chr3L 22989853 22989889 chr3L 22996837 22996883 297 10 6993 6.0 2.5 4.2 1.9 7030 chr3L 22989853 intergenic not near genes chr3L 22993368 intergenic not near genes chr3L 22996883 intergenic not near genes chr3L_10_22990001 chr3L_22990001 RAL-426 1951 chr3L 23011994 23012033 chr3L 23012118 23012156 11 121 3.5 4.5 4.0 2.2 162 chr3L 23011994 intron nrm + chr3L 23012075 intron nrm + chr3L 23012156 intron nrm + chr3L_11_23010001 chr3L_23010001 RAL-426 1952 chr3L 23042208 23042258 chr3L 23048979 23048992 gypsy6 14 6762 5.0 5.0 5.0 2.3 6784 chr3L 23042208 intergenic not near genes chr3L 23045600 intergenic not near genes chr3L 23048992 intergenic not near genes chr3L_14_23045001 chr3L_23045001 RAL-426 1953 chr3L 23062874 23062893 chr3L 25074004 25074004 Tirant 4 2011125 8.5 24.0 16.2 0.2 2011130 chr3L 23062874 intergenic not near genes chr3L 24068439 intergenic not near genes chr3L 25074004 intergenic not near genes chr3L_4_24065001 chr3L_24065001 RAL-426 1954 chr3L 23101273 23101316 chr3L 23101499 23101544 8 229 1.0 2.0 1.5 3.2 271 chr3L 23101273 intron CkIIalpha + chr3L 23101408 intron CkIIalpha + chr3L 23101544 intron CkIIalpha + chr3L_8_23100001 chr3L_23100001 RAL-426 1955 chr3L 23182264 23182292 chr3L 23182373 23182395 12 111 5.0 3.5 4.2 2.3 131 chr3L 23182264 intron CG34031 + chr3L 23182330 intron CG34031 + chr3L 23182395 intron CG34031 + chr3L_12_23180001 chr3L_23180001 RAL-426 1956 chr3L 23205444 23205447 chr3L 23205689 23205694 4 248 7.0 5.0 6.0 0.6 250 chr3L 23205444 intergenic not near genes chr3L 23205569 intergenic not near genes chr3L 23205694 intergenic not near genes chr3L_4_23205001 chr3L_23205001 RAL-426 1957 chr3L 23875529 23875557 chr3L 23875630 23875651 4 95 5.5 5.0 5.2 0.6 122 chr3L 23875529 intron CG40470 - chr3L 23875590 intron CG40470 - chr3L 23875651 intron CG40470 - chr3L_4_23875001 chr3L_23875001 RAL-426 1958 chr3L 23940852 23940890 chr3L 23940946 23940990 9 95 1.5 3.0 2.2 2.8 138 chr3L 23940852 intron CG40470 - chr3L 23940921 intron CG40470 - chr3L 23940990 intron CG40470 - chr3L_9_23940001 chr3L_23940001 RAL-426 1959 chr3L 24009646 24009683 chr3L 24009848 24009885 11 201 4.5 1.5 3.0 2.8 239 chr3L 24009646 intergenic CR40053 - chr3L 24009766 intergenic CR40053 - chr3L 24009885 intergenic CR40053 - chr3L_11_24005001 chr3L_24005001 RAL-426 1960 chr3L 24012394 24012409 chr3L 24020755 24020759 roo 4 8358 3.5 4.5 4.0 0.8 8365 chr3L 24012394 intergenic not near genes chr3L 24016576 intergenic not near genes chr3L 24020759 intergenic not near genes chr3L_4_24015001 chr3L_24015001 RAL-426 1961 chr3L 24021267 24021313 chr3L 24022444 24022489 1360 7 1177 1.0 2.0 1.5 2.8 1222 chr3L 24021267 intergenic not near genes chr3L 24021878 intergenic not near genes chr3L 24022489 intergenic not near genes chr3L_7_24020001 chr3L_24020001 RAL-426 1962 chr3L 24035954 24035991 chr3L 24036742 24036774 11 786 4.5 4.5 4.5 2.0 820 chr3L 24035954 intergenic CG40045 + chr3L 24036364 intergenic not near genes chr3L 24036774 intergenic not near genes chr3L_11_24035001 chr3L_24035001 RAL-426 1963 chr3L 24084501 24084517 chr3L 24084574 24084599 7 80 1.5 4.5 3.0 1.8 98 chr3L 24084501 intron Snap25 + chr3L 24084550 intron Snap25 + chr3L 24084599 intron Snap25 + chr3L_7_24080001 chr3L_24080001 RAL-426 1964 chr3L 24240951 24240987 chr3L 24241226 24241261 9 272 4.5 1.0 2.8 2.4 310 chr3L 24240951 intron Snap25 + chr3L 24241106 intron Snap25 + chr3L 24241261 intron Snap25 + chr3L_9_24240001 chr3L_24240001 RAL-426 1965 chr3L 24297947 24297990 chr3L 24298073 24298116 7 126 12.5 11.5 12.0 0.5 169 chr3L 24297947 3` UTR Snap25 + chr3L 24298032 3` UTR Snap25 + chr3L 24298116 3` UTR Snap25 + chr3L_7_24295001 chr3L_24295001 RAL-426 1966 chr3L 24363226 24363264 chr3L 24363324 24363331 9 92 7.5 5.0 6.2 1.2 105 chr3L 24363226 intron nvd + chr3L 24363278 intron nvd + chr3L 24363331 intron nvd + chr3L_9_24360001 chr3L_24360001 RAL-426 1967 chr3L 24791878 24791908 chr3L 24796676 24796707 Doc 5 4796 3.0 1.5 2.2 1.6 4829 chr3L 24791878 intergenic not near genes chr3L 24794292 intergenic not near genes chr3L 24796707 intergenic not near genes chr3L_5_24790001 chr3L_24790001 RAL-426 1968 chr3L 25513557 25513610 chr3L 25513656 25513708 11 92 3.0 4.5 3.8 2.3 151 chr3L 25513557 intron CG41343 - chr3L 25513632 intron CG41343 - chr3L 25513708 intron CG41343 - chr3L_11_25510001 chr3L_25510001 RAL-426 1969 chr3L 25627830 25627837 chr3L 25627888 25627912 5 79 5.0 2.5 3.8 1.0 82 chr3L 25627830 intron CG41343 - chr3L 25627871 intron CG41343 - chr3L 25627912 intron CG41343 - chr3L_5_25625001 chr3L_25625001 RAL-426 1970 chr3L 25842480 25842499 chr3L 25842585 25842605 8 103 0.5 4.5 2.5 2.3 125 chr3L 25842480 intron CG40178 - chr3L 25842542 intron CG40178 - chr3L 25842605 intron CG40178 - chr3L_8_25840001 chr3L_25840001 RAL-426 1971 chr3L 26009429 26009451 chr3L 26009529 26009541 5 98 0.5 3.5 2.0 1.7 112 chr3L 26009429 intron CG40178 - chr3L 26009485 intron CG40178 - chr3L 26009541 intron CG40178 - chr3L_5_26005001 chr3L_26005001 RAL-426 1972 chr3L 26694913 26694953 chr3L 26695013 26695043 8 92 3.0 2.5 2.8 2.1 130 chr3L 26694913 intergenic not near genes chr3L 26694978 intergenic not near genes chr3L 26695043 intergenic not near genes chr3L_8_26690001 chr3L_26690001 RAL-426 1973 chr3L 27368857 27368903 chr3L 27369422 27369451 18 563 4.5 1.5 3.0 4.5 594 chr3L 27368857 intron Dbp80 + chr3L 27369154 intron Dbp80 + chr3L 27369451 intron Dbp80 + chr3L_18_27365001 chr3L_27365001 RAL-426 1974 chr3L 27390436 27390710 chr3L 27390676 27390809 13 103 23.5 29.5 26.5 0.5 373 chr3L 27390436 intron Dbp80 + chr3L 27390622 intron Dbp80 + chr3L 27390809 intron Dbp80 + chr3L_13_27390001 chr3L_27390001 RAL-426 1975 chr3L 27715448 27715468 chr3L 27715552 27715561 5 106 1.0 4.5 2.8 1.3 113 chr3L 27715448 intergenic not near genes chr3L 27715504 intergenic not near genes chr3L 27715561 intergenic not near genes chr3L_5_27715001 chr3L_27715001 RAL-426 1976 chr3L 27980676 27980725 chr3L 27985494 27985531 Doc 6 4816 2.5 1.5 2.0 2.0 4855 chr3L 27980676 intron CG17514 - chr3L 27983104 intron CG17514 - chr3L 27985531 intron CG17514 - chr3L_6_27980001 chr3L_27980001 RAL-426 1977 chr3R 1443418 1443436 chr3R 1443514 1443526 5 94 2.5 2.0 2.2 1.6 108 chr3R 1443418 intron CG40155 + chr3R 1443472 intron CG40155 + chr3R 1443526 intron CG40155 + chr3R_5_1440001 chr3R_1440001 RAL-426 1978 chr3R 1939031 1939081 chr3R 1939143 1939195 5 114 2.5 1.0 1.8 1.8 164 chr3R 1939031 intergenic not near genes chr3R 1939113 intergenic not near genes chr3R 1939195 intergenic not near genes chr3R_5_1935001 chr3R_1935001 RAL-426 1979 chr3R 2534155 2534161 chr3R 2541714 2541715 5 7568 15.0 20.5 17.8 0.3 7560 chr3R 2534155 intergenic not near genes chr3R 2537935 intergenic not near genes chr3R 2541715 intergenic not near genes chr3R_5_2535001 chr3R_2535001 RAL-426 1980 chr3R 2859828 2859850 chr3R 2859956 2859976 4 124 4.0 2.0 3.0 1.0 148 chr3R 2859828 intergenic not near genes chr3R 2859902 intergenic not near genes chr3R 2859976 intergenic not near genes chr3R_4_2855001 chr3R_2855001 RAL-426 1981 chr3R 3178704 3178713 chr3R 3595193 3595215 5 416494 18.5 20.5 19.5 0.2 416511 chr3R 3178704 intron CG42617 - chr3R 3386960 intergenic not near genes chr3R 3595215 intergenic not near genes chr3R_5_3385001 chr3R_3385001 RAL-426 1982 chr3R 3522600 3522631 chr3R 3522781 3522795 13 179 5.5 5.5 5.5 2.0 195 chr3R 3522600 intron Parp - chr3R 3522698 intron Parp - chr3R 3522795 intron Parp - chr3R_13_3520001 chr3R_3520001 RAL-426 1983 chr3R 3877475 3877499 chr3R 3877614 3877627 8 146 3.0 3.0 3.0 2.0 152 chr3R 3877475 intergenic not near genes chr3R 3877551 intergenic not near genes chr3R 3877627 intergenic not near genes chr3R_8_3875001 chr3R_3875001 RAL-426 1984 chr3R 4206052 4206102 chr3R 4211647 4211693 mdg3 11 5590 6.0 3.0 4.5 2.0 5641 chr3R 4206052 intron CG14636 - chr3R 4208872 intron CG14636 - chr3R 4211693 intron CG14636 - chr3R_11_4205001 chr3R_4205001 RAL-426 1985 chr3R 4366739 4366773 chr3R 4375142 4375172 roo 11 8400 3.5 3.5 3.5 2.4 8433 chr3R 4366739 3` UTR CG1090 + chr3R 4370956 intergenic not near genes chr3R 4375172 5` UTR CR44922 + chr3R_11_4370001 chr3R_4370001 RAL-426 1986 chr3R 4408394 4408436 chr3R 4412718 4412760 Juan 17 4323 4.5 8.0 6.2 2.4 4366 chr3R 4408394 intron CG32944 - chr3R 4410577 intron CG32944 - chr3R 4412760 intron CG32944 - chr3R_17_4410001 chr3R_4410001 RAL-426 1987 chr3R 4599294 4599331 chr3R 4599386 4599425 6 99 2.0 2.0 2.0 2.0 131 chr3R 4599294 intron CR44317 - chr3R 4599360 intron CR44317 - chr3R 4599425 intron CR44317 - chr3R_6_4595001 chr3R_4595001 RAL-426 1988 chr3R 4683161 4683202 chr3R 4684940 4684973 S-element 9 1775 3.5 1.0 2.2 2.8 1812 chr3R 4683161 intron CG43427 + chr3R 4684067 intron CG43427 + chr3R 4684973 intron CG43427 + chr3R_9_4680001 chr3R_4680001 RAL-426 1989 chr3R 4753239 4753273 chr3R 4757554 4757571 F-element 6 4310 8.0 8.5 8.2 0.7 4332 chr3R 4753239 intron,intron atms +,CG44098 - chr3R 4755405 intron,intron atms +,CG44098 - chr3R 4757571 intron,exon atms +,CG44098 - chr3R_6_4755001 chr3R_4755001 RAL-426 1990 chr3R 4759705 4759747 chr3R 4761218 4761264 hopper2 15 1515 4.0 7.0 5.5 2.3 1559 chr3R 4759705 intron,intron atms +,CG44098 - chr3R 4760484 intron,intron atms +,CG44098 - chr3R 4761264 intron,intron atms +,CG44098 - chr3R_15_4760001 chr3R_4760001 RAL-426 1991 chr3R 4769138 4769189 chr3R 4769236 4769287 16 93 5.0 4.5 4.8 2.8 149 chr3R 4769138 intron,intron atms +,CG44098 - chr3R 4769212 intron,intron atms +,CG44098 - chr3R 4769287 intron,intron atms +,CG44098 - chr3R_16_4765001 chr3R_4765001 RAL-426 1992 chr3R 4856735 4856767 chr3R 4856842 4856873 4 105 3.5 2.0 2.8 1.1 138 chr3R 4856735 intron opa + chr3R 4856804 intron opa + chr3R 4856873 intron opa + chr3R_4_4855001 chr3R_4855001 RAL-426 1993 chr3R 4861559 4861586 chr3R 4861649 4861655 4 75 5.0 4.0 4.5 0.7 96 chr3R 4861559 intron opa + chr3R 4861607 intron opa + chr3R 4861655 intron opa + chr3R_4_4860001 chr3R_4860001 RAL-426 1994 chr3R 4887462 4887509 chr3R 4894855 4894905 rover 4 7393 4.0 3.5 3.8 0.8 7443 chr3R 4887462 intergenic not near genes chr3R 4891184 intergenic not near genes chr3R 4894905 intergenic not near genes chr3R_4_4890001 chr3R_4890001 RAL-426 1995 chr3R 4939235 4939278 chr3R 4939352 4939388 12 113 1.5 1.5 1.5 4.8 153 chr3R 4939235 intron Cdep + chr3R 4939312 intron Cdep + chr3R 4939388 intron Cdep + chr3R_12_4935001 chr3R_4935001 RAL-426 1996 chr3R 4948374 4948390 chr3R 4949005 4949032 4 639 13.5 19.5 16.5 0.2 658 chr3R 4948374 intergenic snRNA:U1:82Eb -,UbcD6 - chr3R 4948703 intergenic UbcD6 - chr3R 4949032 3` UTR UbcD6 - chr3R_4_4945001 chr3R_4945001 RAL-426 1997 chr3R 4965990 4966033 chr3R 4966101 4966145 13 109 8.5 3.0 5.8 1.9 155 chr3R 4965990 intron CG1124 + chr3R 4966068 intron CG1124 + chr3R 4966145 intron CG1124 + chr3R_13_4965001 chr3R_4965001 RAL-426 1998 chr3R 4984278 4984324 chr3R 4984390 4984436 14 112 3.5 2.5 3.0 3.5 158 chr3R 4984278 intergenic CG14662 -,CR43424 -,CR43478 + chr3R 4984357 intergenic CG14662 -,CR43424 -,CR43478 + chr3R 4984436 intergenic CR43424 -,CG14662 - chr3R_14_4980001 chr3R_4980001 RAL-426 1999 chr3R 5045844 5045873 chr3R 5052945 5052995 HMS-Beagle 5 7118 7.0 3.0 5.0 0.8 7151 chr3R 5045844 intron CR43635 - chr3R 5049420 intergenic not near genes chr3R 5052995 intergenic CR45588 - chr3R_5_5045001 chr3R_5045001 RAL-426 2000 chr3R 5067961 5068012 chr3R 5073498 5073549 mdg3 19 5536 4.5 5.5 5.0 3.2 5588 chr3R 5067961 intergenic not near genes chr3R 5070755 intergenic not near genes chr3R 5073549 intergenic not near genes chr3R_19_5070001 chr3R_5070001 RAL-426 2001 chr3R 5162916 5162963 chr3R 5163088 5163135 12 171 2.0 1.5 1.8 4.3 219 chr3R 5162916 intron dpr16 + chr3R 5163026 intron dpr16 + chr3R 5163135 intron dpr16 + chr3R_12_5160001 chr3R_5160001 RAL-426 2002 chr3R 5236216 5236243 chr3R 5236346 5236389 10 144 3.5 4.0 3.8 2.1 173 chr3R 5236216 3` UTR,3` UTR Mms19 +,rtp - chr3R 5236302 3` UTR rtp - chr3R 5236389 3` UTR rtp - chr3R_10_5235001 chr3R_5235001 RAL-426 2003 chr3R 5278073 5278121 chr3R 5278170 5278210 17 93 6.5 3.5 5.0 2.8 137 chr3R 5278073 intron mtd - chr3R 5278142 intron mtd - chr3R 5278210 intron mtd - chr3R_17_5275001 chr3R_5275001 RAL-426 2004 chr3R 5338389 5338426 chr3R 5343568 5343617 Rt1c 12 5192 4.0 6.0 5.0 2.0 5228 chr3R 5338389 intron mtd - chr3R 5341003 intron mtd - chr3R 5343617 intron mtd - chr3R_12_5340001 chr3R_5340001 RAL-426 2005 chr3R 5445971 5445993 chr3R 5452438 5452473 Burdock 5 6475 4.5 7.5 6.0 0.7 6502 chr3R 5445971 intron CG14669 + chr3R 5449222 intron CG14669 + chr3R 5452473 intron CG14669 + chr3R_5_5445001 chr3R_5445001 RAL-426 2006 chr3R 5453296 5453349 chr3R 5453429 5453443 6 114 1.0 3.0 2.0 2.0 147 chr3R 5453296 intron CG14669 + chr3R 5453370 intron CG14669 + chr3R 5453443 intron CG14669 + chr3R_6_5450001 chr3R_5450001 RAL-426 2007 chr3R 5680764 5680808 chr3R 5680868 5680912 11 101 4.5 2.5 3.5 2.4 148 chr3R 5680764 3` UTR Rab23 - chr3R 5680838 3` UTR Rab23 - chr3R 5680912 3` UTR Rab23 - chr3R_11_5680001 chr3R_5680001 RAL-426 2008 chr3R 5688786 5688813 chr3R 5688908 5688954 9 133 2.0 3.5 2.8 2.4 168 chr3R 5688786 intron plx + chr3R 5688870 intron plx + chr3R 5688954 intron plx + chr3R_9_5685001 chr3R_5685001 RAL-426 2009 chr3R 5745997 5746045 chr3R 5746256 5746305 pogo 14 260 3.5 7.5 5.5 2.2 308 chr3R 5745997 3` UTR Madm + chr3R 5746151 3` UTR Madm + chr3R 5746305 3` UTR Madm + chr3R_14_5745001 chr3R_5745001 RAL-426 2010 chr3R 5747007 5747041 chr3R 5753208 5753246 diver 6 6208 4.5 3.0 3.8 1.2 6239 chr3R 5747007 intergenic Madm + chr3R 5750126 intergenic not near genes chr3R 5753246 intergenic CG2091 - chr3R_6_5750001 chr3R_5750001 RAL-426 2011 chr3R 5809117 5809141 chr3R 5809361 5809402 pogo 12 258 2.0 4.0 3.0 3.0 285 chr3R 5809117 3` UTR CG11000 + chr3R 5809260 3` UTR CG11000 + chr3R 5809402 3` UTR CG11000 + chr3R_12_5805001 chr3R_5805001 RAL-426 2012 chr3R 5822364 5822407 chr3R 5823551 5823590 1360 8 1186 5.0 8.5 6.8 1.0 1226 chr3R 5822364 3` UTR CG2023 - chr3R 5822977 3` UTR CG2023 - chr3R 5823590 3` UTR CG2023 - chr3R_8_5820001 chr3R_5820001 RAL-426 2013 chr3R 5927566 5927587 chr3R 5927805 5927845 pogo 10 245 1.0 3.5 2.2 3.1 279 chr3R 5927566 intron CG34113 - chr3R 5927706 intron CG34113 - chr3R 5927845 intron CG34113 - chr3R_10_5925001 chr3R_5925001 RAL-426 2014 chr3R 6015565 6015577 chr3R 6015666 6015682 5 104 1.0 7.5 4.2 1.0 117 chr3R 6015565 intergenic not near genes chr3R 6015624 intergenic not near genes chr3R 6015682 intergenic not near genes chr3R_5_6015001 chr3R_6015001 RAL-426 2015 chr3R 6124221 6124256 chr3R 6124325 6124360 15 99 2.5 4.5 3.5 3.3 139 chr3R 6124221 3` UTR Vha14-2 + chr3R 6124290 3` UTR Vha14-2 + chr3R 6124360 3` UTR Vha14-2 + chr3R_15_6120001 chr3R_6120001 RAL-426 2016 chr3R 6158490 6158541 chr3R 6167093 6167098 Tirant 7 8592 4.0 4.5 4.2 1.3 8608 chr3R 6158490 intergenic not near genes chr3R 6162794 intergenic not near genes chr3R 6167098 intergenic CG1077 + chr3R_7_6160001 chr3R_6160001 RAL-426 2017 chr3R 6172850 6172890 chr3R 6173293 6173308 8 430 4.5 3.0 3.8 1.7 458 chr3R 6172850 intergenic not near genes chr3R 6173079 intergenic Osi1 + chr3R 6173308 intergenic Osi1 + chr3R_8_6170001 chr3R_6170001 RAL-426 2018 chr3R 6175155 6175201 chr3R 6182447 6182493 HMS-Beagle2 15 7289 3.5 7.0 5.2 2.4 7338 chr3R 6175155 intergenic Osi1 + chr3R 6178824 intron CR45194 + chr3R 6182493 intergenic CR45194 + chr3R_15_6175001 chr3R_6175001 RAL-426 2019 chr3R 6187755 6187789 chr3R 6195513 6195546 6 7760 17.5 22.5 20.0 0.3 7791 chr3R 6187755 intron NPFR + chr3R 6191650 intron NPFR + chr3R 6195546 intergenic NPFR + chr3R_6_6190001 chr3R_6190001 RAL-426 2020 chr3R 6206292 6206313 chr3R 6206505 6206521 BS 8 225 5.5 7.0 6.2 1.1 229 chr3R 6206292 exon Osi24 + chr3R 6206406 intron Osi24 + chr3R 6206521 intron Osi24 + chr3R_8_6205001 chr3R_6205001 RAL-426 2021 chr3R 6222288 6222337 chr3R 6222389 6222423 15 96 2.5 3.5 3.0 3.8 135 chr3R 6222288 intergenic not near genes chr3R 6222356 intergenic not near genes chr3R 6222423 intergenic not near genes chr3R_15_6220001 chr3R_6220001 RAL-426 2022 chr3R 6421090 6421122 chr3R 6421274 6421306 4 184 4.0 3.0 3.5 0.9 216 chr3R 6421090 intron gpp + chr3R 6421198 intron gpp + chr3R 6421306 intron gpp + chr3R_4_6420001 chr3R_6420001 RAL-426 2023 chr3R 6477831 6477867 chr3R 6477943 6477979 8 110 5.5 8.5 7.0 1.0 148 chr3R 6477831 intergenic CG15186 + chr3R 6477905 intergenic CG15186 + chr3R 6477979 intergenic CG15186 + chr3R_8_6475001 chr3R_6475001 RAL-426 2024 chr3R 6494820 6494874 chr3R 6495034 6495085 13 213 1.5 2.5 2.0 4.3 265 chr3R 6494820 3` UTR CG15186 + chr3R 6494952 3` UTR CG15186 + chr3R 6495085 intergenic CG15186 + chr3R_13_6490001 chr3R_6490001 RAL-426 2025 chr3R 6507521 6507538 chr3R 6507593 6507646 8 94 2.0 6.5 4.2 1.5 125 chr3R 6507521 intergenic not near genes chr3R 6507584 intergenic not near genes chr3R 6507646 intergenic not near genes chr3R_8_6505001 chr3R_6505001 RAL-426 2026 chr3R 6510013 6510052 chr3R 6515111 6515153 jockey 6 5100 5.5 3.0 4.2 1.2 5140 chr3R 6510013 intergenic not near genes chr3R 6512583 intergenic not near genes chr3R 6515153 intergenic not near genes chr3R_6_6510001 chr3R_6510001 RAL-426 2027 chr3R 6604637 6604688 chr3R 6604736 6604741 10 87 1.5 5.5 3.5 2.2 104 chr3R 6604637 intergenic not near genes chr3R 6604689 intergenic not near genes chr3R 6604741 intergenic not near genes chr3R_10_6600001 chr3R_6600001 RAL-426 2028 chr3R 6705672 6705704 chr3R 6705916 6705945 4 243 0.0 3.0 1.5 1.6 273 chr3R 6705672 intergenic not near genes chr3R 6705808 intergenic not near genes chr3R 6705945 intergenic not near genes chr3R_4_6705001 chr3R_6705001 RAL-426 2029 chr3R 6856374 6856386 chr3R 6856505 6856523 5 134 3.5 1.5 2.5 1.4 149 chr3R 6856374 intergenic not near genes chr3R 6856448 intergenic not near genes chr3R 6856523 intergenic not near genes chr3R_5_6855001 chr3R_6855001 RAL-426 2030 chr3R 6862212 6862252 chr3R 6862315 6862359 13 105 2.5 6.0 4.2 2.5 147 chr3R 6862212 intergenic not near genes chr3R 6862286 intergenic not near genes chr3R 6862359 intergenic not near genes chr3R_13_6860001 chr3R_6860001 RAL-426 2031 chr3R 6891221 6891267 chr3R 6891316 6891363 5 94 5.5 8.0 6.8 0.6 142 chr3R 6891221 intergenic not near genes chr3R 6891292 intergenic not near genes chr3R 6891363 intergenic not near genes chr3R_5_6890001 chr3R_6890001 RAL-426 2032 chr3R 6918046 6918089 chr3R 6918144 6918187 14 97 2.5 3.0 2.8 3.7 141 chr3R 6918046 intron Antp - chr3R 6918116 intron Antp - chr3R 6918187 intron Antp - chr3R_14_6915001 chr3R_6915001 RAL-426 2033 chr3R 6972352 6972381 chr3R 6972449 6972478 7 95 4.0 2.5 3.2 1.7 126 chr3R 6972352 intron Antp - chr3R 6972415 intron Antp - chr3R 6972478 intron Antp - chr3R_7_6970001 chr3R_6970001 RAL-426 2034 chr3R 6978873 6978915 chr3R 6978966 6979020 11 102 3.0 1.5 2.2 3.4 147 chr3R 6978873 intron Antp - chr3R 6978946 intron Antp - chr3R 6979020 intron Antp - chr3R_11_6975001 chr3R_6975001 RAL-426 2035 chr3R 6987404 6987431 chr3R 6987503 6987530 12 100 5.0 5.5 5.2 1.9 126 chr3R 6987404 intron Antp - chr3R 6987467 intron Antp - chr3R 6987530 intron Antp - chr3R_12_6985001 chr3R_6985001 RAL-426 2036 chr3R 7068498 7068521 chr3R 7068634 7068666 10 139 4.5 5.5 5.0 1.7 168 chr3R 7068498 intron CG1965 + chr3R 7068582 intron CG1965 + chr3R 7068666 intron CG1965 + chr3R_10_7065001 chr3R_7065001 RAL-426 2037 chr3R 7103289 7103307 chr3R 7103376 7103402 7 93 3.5 8.5 6.0 1.0 113 chr3R 7103289 intron Alh - chr3R 7103346 intron Alh - chr3R 7103402 intron Alh - chr3R_7_7100001 chr3R_7100001 RAL-426 2038 chr3R 7173660 7173693 chr3R 7173760 7173790 5 99 3.0 4.5 3.8 1.0 130 chr3R 7173660 intron sas + chr3R 7173725 intron sas + chr3R 7173790 intron sas + chr3R_5_7170001 chr3R_7170001 RAL-426 2039 chr3R 7210607 7210614 chr3R 7210704 7210720 4 103 0.0 10.0 5.0 0.7 113 chr3R 7210607 intergenic not near genes chr3R 7210664 intergenic not near genes chr3R 7210720 intergenic not near genes chr3R_4_7210001 chr3R_7210001 RAL-426 2040 chr3R 7214597 7214606 chr3R 7214720 7214734 5 129 7.0 6.0 6.5 0.7 137 chr3R 7214597 3` UTR CG14606 - chr3R 7214666 3` UTR CG14606 - chr3R 7214734 3` UTR CG14606 - chr3R_5_7210001 chr3R_7210001 RAL-426 2041 chr3R 7214607 7214614 chr3R 7214719 7214755 5 133 6.0 5.0 5.5 0.8 148 chr3R 7214607 3` UTR CG14606 - chr3R 7214681 3` UTR CG14606 - chr3R 7214755 exon CG14606 - chr3R_5_7210001 chr3R_7210001 RAL-426 2042 chr3R 7364789 7364833 chr3R 7364904 7364948 10 109 4.0 12.0 8.0 1.1 159 chr3R 7364789 intergenic Mst84Dc -,Mst84Db - chr3R 7364868 intergenic Mst84Dc -,Mst84Db - chr3R 7364948 intergenic Mst84Db -,Mst84Dc - chr3R_10_7360001 chr3R_7360001 RAL-426 2043 chr3R 7418037 7418086 chr3R 7418373 7418422 8 336 1.5 1.5 1.5 3.2 385 chr3R 7418037 intergenic not near genes chr3R 7418230 intergenic not near genes chr3R 7418422 intergenic not near genes chr3R_8_7415001 chr3R_7415001 RAL-426 2044 chr3R 7438915 7438943 chr3R 7439003 7439008 9 86 2.0 2.0 2.0 3.0 93 chr3R 7438915 intergenic not near genes chr3R 7438962 intergenic not near genes chr3R 7439008 intergenic not near genes chr3R_9_7435001 chr3R_7435001 RAL-426 2045 chr3R 7447974 7448011 chr3R 7448070 7448108 16 97 3.5 4.0 3.8 3.3 134 chr3R 7447974 intergenic not near genes chr3R 7448041 intergenic not near genes chr3R 7448108 intergenic not near genes chr3R_16_7445001 chr3R_7445001 RAL-426 2046 chr3R 7511742 7511797 chr3R 7511843 7511876 12 98 2.0 3.0 2.5 3.4 134 chr3R 7511742 intron alpha-Est8 - chr3R 7511809 intron alpha-Est8 - chr3R 7511876 intron alpha-Est8 - chr3R_12_7510001 chr3R_7510001 RAL-426 2047 chr3R 7621529 7621558 chr3R 7621619 7621664 6 97 0.5 2.5 1.5 2.4 135 chr3R 7621529 intron CG34127 - chr3R 7621596 intron CG34127 - chr3R 7621664 intron CG34127 - chr3R_6_7620001 chr3R_7620001 RAL-426 2048 chr3R 7635635 7635680 chr3R 7635737 7635738 11 97 3.5 2.5 3.0 2.8 103 chr3R 7635635 intron CG34127 - chr3R 7635686 intron CG34127 - chr3R 7635738 intron CG34127 - chr3R_11_7635001 chr3R_7635001 RAL-426 2049 chr3R 7677925 7677938 chr3R 7678037 7678067 7 116 2.0 4.5 3.2 1.7 142 chr3R 7677925 intron Nlg1 + chr3R 7677996 intron Nlg1 + chr3R 7678067 intron Nlg1 + chr3R_7_7675001 chr3R_7675001 RAL-426 2050 chr3R 7694558 7694601 chr3R 7713639 7713659 invader3 10 19079 2.5 5.5 4.0 2.0 19101 chr3R 7694558 3` UTR Nlg1 + chr3R 7704108 intergenic not near genes chr3R 7713659 intergenic not near genes chr3R_10_7700001 chr3R_7700001 RAL-426 2051 chr3R 7729449 7729494 chr3R 7737402 7737452 Stalker2 22 7953 3.0 4.5 3.8 4.6 8003 chr3R 7729449 intergenic not near genes chr3R 7733450 intergenic not near genes chr3R 7737452 intergenic not near genes chr3R_22_7730001 chr3R_7730001 RAL-426 2052 chr3R 7821704 7821738 chr3R 7821817 7821838 7 111 2.0 2.5 2.2 2.2 134 chr3R 7821704 intron CG34384 + chr3R 7821771 intron CG34384 + chr3R 7821838 intron CG34384 + chr3R_7_7820001 chr3R_7820001 RAL-426 2053 chr3R 7830287 7830314 chr3R 7830457 7830458 5 162 5.5 4.5 5.0 0.8 171 chr3R 7830287 intron CG34384 + chr3R 7830372 intron CG34384 + chr3R 7830458 intron CG34384 + chr3R_5_7830001 chr3R_7830001 RAL-426 2054 chr3R 7830315 7830330 chr3R 7830454 7830474 6 157 3.5 4.5 4.0 1.2 159 chr3R 7830315 intron CG34384 + chr3R 7830394 intron CG34384 + chr3R 7830474 intron CG34384 + chr3R_6_7830001 chr3R_7830001 RAL-426 2055 chr3R 7849640 7849677 chr3R 7850827 7850840 1360 9 1178 3.5 7.5 5.5 1.4 1200 chr3R 7849640 intron CG34384 + chr3R 7850240 intron CG34384 + chr3R 7850840 intron CG34384 + chr3R_9_7850001 chr3R_7850001 RAL-426 2056 chr3R 7773344 7773344 chr3R 7890529 7890532 4 117186 18.5 10.0 14.2 0.3 117188 chr3R 7773344 intergenic not near genes chr3R 7831938 intron CG34384 + chr3R 7890532 intron mRpS9 - chr3R_4_7830001 chr3R_7830001 RAL-426 2057 chr3R 7951448 7951454 chr3R 7951566 7951573 4 119 9.0 5.5 7.2 0.5 125 chr3R 7951448 intron dsx - chr3R 7951510 intron dsx - chr3R 7951573 intron dsx - chr3R_4_7950001 chr3R_7950001 RAL-426 2058 chr3R 7951465 7951489 chr3R 7951565 7951606 13 115 3.5 5.5 4.5 2.4 141 chr3R 7951465 intron dsx - chr3R 7951536 intron dsx - chr3R 7951606 intron dsx - chr3R_13_7950001 chr3R_7950001 RAL-426 2059 chr3R 7973305 7973340 chr3R 7974387 7974410 1360 5 1079 2.0 3.5 2.8 1.3 1105 chr3R 7973305 intergenic not near genes chr3R 7973858 intergenic not near genes chr3R 7974410 3` UTR CD98hc - chr3R_5_7970001 chr3R_7970001 RAL-426 2060 chr3R 8082565 8082592 chr3R 8082662 8082689 10 97 3.0 3.5 3.2 2.4 124 chr3R 8082565 intron mAChR-B + chr3R 8082627 intron mAChR-B + chr3R 8082689 intron mAChR-B + chr3R_10_8080001 chr3R_8080001 RAL-426 2061 chr3R 8090252 8090299 chr3R 8090447 8090496 13 195 6.5 7.5 7.0 1.6 244 chr3R 8090252 5` UTR CR44330 + chr3R 8090374 intergenic CR44330 + chr3R 8090496 intergenic CR44330 + chr3R_13_8090001 chr3R_8090001 RAL-426 2062 chr3R 8090547 8090558 chr3R 8094044 8094049 297 5 3495 9.5 12.0 10.8 0.4 3502 chr3R 8090547 intergenic CR44330 + chr3R 8092298 intergenic not near genes chr3R 8094049 intergenic CG7900 + chr3R_5_8090001 chr3R_8090001 RAL-426 2063 chr3R 8207568 8207585 chr3R 8208405 8208447 F-element 4 857 7.0 5.5 6.2 0.6 879 chr3R 8207568 intergenic not near genes chr3R 8208008 intergenic not near genes chr3R 8208447 intergenic not near genes chr3R_4_8205001 chr3R_8205001 RAL-426 2064 chr3R 8247908 8247930 chr3R 8247988 8248032 6 94 5.5 6.0 5.8 0.9 124 chr3R 8247908 intron,intron CG18749 +,CG33722 + chr3R 8247970 3` UTR,3` UTR CG18749 +,CG33722 + chr3R 8248032 3` UTR,3` UTR CG18749 +,CG33722 + chr3R_6_8245001 chr3R_8245001 RAL-426 2065 chr3R 8253783 8253821 chr3R 8254054 8254094 19 270 7.0 6.0 6.5 2.5 311 chr3R 8253783 intron mtg + chr3R 8253938 intron mtg + chr3R 8254094 intron mtg + chr3R_19_8250001 chr3R_8250001 RAL-426 2066 chr3R 8255034 8255078 chr3R 8255139 8255166 21 100 6.5 7.0 6.8 2.7 132 chr3R 8255034 intron mtg + chr3R 8255100 intron mtg + chr3R 8255166 intron mtg + chr3R_21_8255001 chr3R_8255001 RAL-426 2067 chr3R 8287348 8287397 chr3R 8287474 8287523 15 121 1.0 4.0 2.5 4.3 175 chr3R 8287348 5` UTR CR44318 + chr3R 8287436 5` UTR CR44318 + chr3R 8287523 5` UTR CR44318 + chr3R_15_8285001 chr3R_8285001 RAL-426 2068 chr3R 8339247 8339247 chr3R 21907534 21907536 6 13568288 17.5 24.0 20.8 0.3 13568289 chr3R 8339247 intergenic not near genes chr3R 15123392 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_6_15120001 chr3R_15120001 RAL-426 2069 chr3R 8393588 8393605 chr3R 8393665 8393708 7 94 1.0 5.0 3.0 1.8 120 chr3R 8393588 intron CG45263 - chr3R 8393648 intron CG45263 - chr3R 8393708 intron CG45263 - chr3R_7_8390001 chr3R_8390001 RAL-426 2070 chr3R 8402993 8403040 chr3R 8412177 8412213 roo 14 9174 4.5 2.5 3.5 3.1 9220 chr3R 8402993 intron CG45263 - chr3R 8407603 intron CG45263 - chr3R 8412213 intron CG45263 - chr3R_14_8405001 chr3R_8405001 RAL-426 2071 chr3R 8498047 8498070 chr3R 8498485 8498536 7 455 2.5 4.0 3.2 1.7 489 chr3R 8498047 intergenic not near genes chr3R 8498292 intergenic not near genes chr3R 8498536 intergenic not near genes chr3R_7_8495001 chr3R_8495001 RAL-426 2072 chr3R 8570460 8570507 chr3R 8575116 8575154 HMS-Beagle 18 4652 3.0 6.5 4.8 3.1 4694 chr3R 8570460 intergenic not near genes chr3R 8572807 intergenic not near genes chr3R 8575154 intergenic not near genes chr3R_18_8570001 chr3R_8570001 RAL-426 2073 chr3R 8601753 8601798 chr3R 8610925 8610950 roo 6 9160 2.0 4.0 3.0 1.5 9197 chr3R 8601753 intron 5-HT2B + chr3R 8606352 intron 5-HT2B + chr3R 8610950 intron 5-HT2B + chr3R_6_8605001 chr3R_8605001 RAL-426 2074 chr3R 8621548 8621571 chr3R 8621617 8621624 4 61 1.5 4.5 3.0 1.0 76 chr3R 8621548 intron 5-HT2B + chr3R 8621586 intron 5-HT2B + chr3R 8621624 intron 5-HT2B + chr3R_4_8620001 chr3R_8620001 RAL-426 2075 chr3R 8707352 8707362 chr3R 8709811 8709823 jockey 4 2460 7.5 5.0 6.2 0.6 2471 chr3R 8707352 intergenic not near genes chr3R 8708588 intergenic not near genes chr3R 8709823 intergenic not near genes chr3R_4_8705001 chr3R_8705001 RAL-426 2076 chr3R 8707364 8707380 chr3R 8709809 8709838 jockey 8 2454 3.0 5.0 4.0 1.6 2474 chr3R 8707364 intergenic not near genes chr3R 8708601 intergenic not near genes chr3R 8709838 intergenic not near genes chr3R_8_8705001 chr3R_8705001 RAL-426 2077 chr3R 8843948 8843964 chr3R 8844538 8844555 6 590 23.5 19.5 21.5 0.3 607 chr3R 8843948 intron pyd - chr3R 8844252 intron pyd - chr3R 8844555 intron pyd - chr3R_6_8840001 chr3R_8840001 RAL-426 2078 chr3R 8843971 8843994 chr3R 8844536 8844585 9 586 17.5 19.5 18.5 0.5 614 chr3R 8843971 intron pyd - chr3R 8844278 intron pyd - chr3R 8844585 intron pyd - chr3R_9_8840001 chr3R_8840001 RAL-426 2079 chr3R 8843833 8843853 chr3R 8844954 8844989 6 1126 25.5 29.0 27.2 0.2 1156 chr3R 8843833 intron pyd - chr3R 8844411 intron pyd - chr3R 8844989 intron pyd - chr3R_6_8840001 chr3R_8840001 RAL-426 2080 chr3R 8843830 8843880 chr3R 8844991 8845001 6 1132 30.0 21.0 25.5 0.2 1171 chr3R 8843830 intron pyd - chr3R 8844416 intron pyd - chr3R 8845001 intron pyd - chr3R_6_8840001 chr3R_8840001 RAL-426 2081 chr3R 8917883 8917898 chr3R 8917983 8917998 4 100 3.5 7.0 5.2 0.6 115 chr3R 8917883 intron pyd - chr3R 8917940 intron pyd - chr3R 8917998 intron pyd - chr3R_4_8915001 chr3R_8915001 RAL-426 2082 chr3R 9036703 9036735 chr3R 9036816 9036851 6 116 1.5 3.5 2.5 1.7 148 chr3R 9036703 intron neur - chr3R 9036777 intron neur - chr3R 9036851 intron neur - chr3R_6_9035001 chr3R_9035001 RAL-426 2083 chr3R 9056803 9056825 chr3R 9056905 9056927 8 100 9.5 2.5 6.0 1.1 124 chr3R 9056803 intron Kdm2 + chr3R 9056865 intron Kdm2 + chr3R 9056927 intron Kdm2 + chr3R_8_9055001 chr3R_9055001 RAL-426 2084 chr3R 9082024 9082072 chr3R 9082137 9082186 12 105 2.5 5.0 3.8 2.5 162 chr3R 9082024 intron pum - chr3R 9082105 intron pum - chr3R 9082186 intron pum - chr3R_12_9080001 chr3R_9080001 RAL-426 2085 chr3R 9108860 9108878 chr3R 9108956 9108974 5 95 7.5 4.5 6.0 0.7 114 chr3R 9108860 intron pum - chr3R 9108917 intron pum - chr3R 9108974 intron pum - chr3R_5_9105001 chr3R_9105001 RAL-426 2086 chr3R 9179477 9179517 chr3R 9181144 9181185 11 1665 2.5 4.5 3.5 2.4 1708 chr3R 9179477 intron pum - chr3R 9180331 intron pum - chr3R 9181185 intron pum - chr3R_11_9180001 chr3R_9180001 RAL-426 2087 chr3R 9278776 9278810 chr3R 9284046 9284073 Rt1a 7 5274 8.5 5.5 7.0 0.9 5297 chr3R 9278776 intergenic not near genes chr3R 9281424 intergenic not near genes chr3R 9284073 intergenic not near genes chr3R_7_9280001 chr3R_9280001 RAL-426 2088 chr3R 9298213 9298256 chr3R 9298321 9298364 9 104 2.5 7.5 5.0 1.5 151 chr3R 9298213 intron CG8861 - chr3R 9298288 intron CG8861 - chr3R 9298364 intron CG8861 - chr3R_9_9295001 chr3R_9295001 RAL-426 2089 chr3R 9313305 9313324 chr3R 9313411 9313431 6 106 14.5 1.0 7.8 0.7 126 chr3R 9313305 intron CG8861 - chr3R 9313368 intron CG8861 - chr3R 9313431 intron CG8861 - chr3R_6_9310001 chr3R_9310001 RAL-426 2090 chr3R 9313325 9313341 chr3R 9313410 9313432 10 101 7.5 1.0 4.2 1.9 107 chr3R 9313325 intron CG8861 - chr3R 9313378 intron CG8861 - chr3R 9313432 intron CG8861 - chr3R_10_9310001 chr3R_9310001 RAL-426 2091 chr3R 9319563 9319586 chr3R 9320011 9320041 jockey 9 452 8.0 6.5 7.2 1.1 478 chr3R 9319563 intron CG8861 - chr3R 9319802 intron CG8861 - chr3R 9320041 intron CG8861 - chr3R_9_9315001 chr3R_9315001 RAL-426 2092 chr3R 9337706 9337758 chr3R 9338813 9338814 16 1100 4.0 6.5 5.2 2.6 1108 chr3R 9337706 intergenic CG8121 + chr3R 9338260 3` UTR CR43301 - chr3R 9338814 3` UTR CR43301 - chr3R_16_9335001 chr3R_9335001 RAL-426 2093 chr3R 9361811 9361842 chr3R 9362072 9362103 pogo 4 261 1.0 7.0 4.0 0.8 292 chr3R 9361811 3` UTR CG45050 + chr3R 9361957 3` UTR CG45050 + chr3R 9362103 3` UTR CG45050 + chr3R_4_9360001 chr3R_9360001 RAL-426 2094 chr3R 9379126 9379167 chr3R 9379228 9379269 5 99 0.0 0.0 0.0 5.0 143 chr3R 9379126 intron FER - chr3R 9379198 intron FER - chr3R 9379269 intron FER - chr3R_5_9375001 chr3R_9375001 RAL-426 2095 chr3R 9526573 9526585 chr3R 9526675 9526686 4 102 1.5 6.5 4.0 0.8 113 chr3R 9526573 exon CG8176 + chr3R 9526630 3` UTR CG8176 + chr3R 9526686 3` UTR CG8176 + chr3R_4_9525001 chr3R_9525001 RAL-426 2096 chr3R 9526586 9526592 chr3R 9526671 9526680 4 94 1.0 6.0 3.5 0.9 94 chr3R 9526586 exon CG8176 + chr3R 9526633 3` UTR CG8176 + chr3R 9526680 3` UTR CG8176 + chr3R_4_9525001 chr3R_9525001 RAL-426 2097 chr3R 9526593 9526611 chr3R 9526669 9526713 7 94 1.0 6.0 3.5 1.6 120 chr3R 9526593 exon CG8176 + chr3R 9526653 3` UTR CG8176 + chr3R 9526713 3` UTR CG8176 + chr3R_7_9525001 chr3R_9525001 RAL-426 2098 chr3R 9586694 9586707 chr3R 9586785 9586818 6 107 10.0 0.5 5.2 1.0 124 chr3R 9586694 intergenic CG8301 +,P58IPK + chr3R 9586756 intergenic CG8301 +,P58IPK + chr3R 9586818 intergenic P58IPK +,CG8301 + chr3R_6_9585001 chr3R_9585001 RAL-426 2099 chr3R 9592471 9592514 chr3R 9592844 9592887 10 372 1.0 3.5 2.2 3.1 416 chr3R 9592471 intron CG8312 + chr3R 9592679 intron CG8312 + chr3R 9592887 intron CG8312 + chr3R_10_9590001 chr3R_9590001 RAL-426 2100 chr3R 9601447 9601492 chr3R 9601584 9601629 11 129 4.0 6.5 5.2 1.8 182 chr3R 9601447 intron CG8312 + chr3R 9601538 intron CG8312 + chr3R 9601629 intron CG8312 + chr3R_11_9600001 chr3R_9600001 RAL-426 2101 chr3R 9608639 9608687 chr3R 9608925 9608972 12 283 1.5 5.5 3.5 2.7 333 chr3R 9608639 intron CG8312 + chr3R 9608806 intron CG8312 + chr3R 9608972 intron CG8312 + chr3R_12_9605001 chr3R_9605001 RAL-426 2102 chr3R 9699958 9700002 chr3R 9700067 9700104 1360 18 105 3.5 6.5 5.0 3.0 146 chr3R 9699958 intron Unc-115a - chr3R 9700031 intron Unc-115a - chr3R 9700104 intron Unc-115a - chr3R_18_9700001 chr3R_9700001 RAL-426 2103 chr3R 9829389 9829431 chr3R 9829489 9829536 13 103 3.0 4.0 3.5 2.9 147 chr3R 9829389 intron Teh1 - chr3R 9829462 intron Teh1 - chr3R 9829536 intron Teh1 - chr3R_13_9825001 chr3R_9825001 RAL-426 2104 chr3R 9891460 9891476 chr3R 9891789 9891804 4 328 4.0 2.0 3.0 1.0 344 chr3R 9891460 intron Glut4EF + chr3R 9891632 intron Glut4EF + chr3R 9891804 intron Glut4EF + chr3R_4_9890001 chr3R_9890001 RAL-426 2105 chr3R 9901046 9901089 chr3R 9901343 9901386 15 298 3.0 4.5 3.8 3.1 340 chr3R 9901046 intron Glut4EF + chr3R 9901216 intron Glut4EF + chr3R 9901386 intron Glut4EF + chr3R_15_9900001 chr3R_9900001 RAL-426 2106 chr3R 10073753 10073788 chr3R 10073880 10073917 10 125 5.5 4.5 5.0 1.7 164 chr3R 10073753 3` UTR nerfin-2 + chr3R 10073835 3` UTR CG5361 - chr3R 10073917 exon CG5361 - chr3R_10_10070001 chr3R_10070001 RAL-426 2107 chr3R 10174101 10174148 chr3R 10174203 10174249 11 101 6.5 5.5 6.0 1.6 148 chr3R 10174101 intron CG12814 - chr3R 10174175 intron CG12814 - chr3R 10174249 intron CG12814 - chr3R_11_10170001 chr3R_10170001 RAL-426 2108 chr3R 10231772 10231814 chr3R 10237369 10237403 mdg3 6 5593 2.5 5.0 3.8 1.2 5631 chr3R 10231772 intron CG42795 + chr3R 10234588 intron CG42795 + chr3R 10237403 intron CG42795 + chr3R_6_10230001 chr3R_10230001 RAL-426 2109 chr3R 10687317 10687329 chr3R 10687413 10687425 4 95 10.5 13.5 12.0 0.3 108 chr3R 10687317 intron Skeletor + chr3R 10687371 intron Skeletor + chr3R 10687425 intron Skeletor + chr3R_4_10685001 chr3R_10685001 RAL-426 2110 chr3R 10696126 10696172 chr3R 10696225 10696265 15 93 7.5 4.5 6.0 2.1 139 chr3R 10696126 3` UTR Skeletor + chr3R 10696196 3` UTR Skeletor + chr3R 10696265 3` UTR Skeletor + chr3R_15_10695001 chr3R_10695001 RAL-426 2111 chr3R 10745407 10745454 chr3R 10745514 10745538 10 99 3.0 3.5 3.2 2.4 131 chr3R 10745407 intron TkR86C - chr3R 10745472 intron TkR86C - chr3R 10745538 intron TkR86C - chr3R_10_10745001 chr3R_10745001 RAL-426 2112 chr3R 10785796 10785838 chr3R 10785895 10785937 10 94 3.5 2.5 3.0 2.5 141 chr3R 10785796 intron Rbp1 + chr3R 10785866 intron Rbp1 + chr3R 10785937 intron Rbp1 + chr3R_10_10785001 chr3R_10785001 RAL-426 2113 chr3R 10804158 10804205 chr3R 10811709 10811757 17.6 9 7550 1.5 0.5 1.0 4.5 7599 chr3R 10804158 intergenic CG14692 - chr3R 10807958 intergenic not near genes chr3R 10811757 3` UTR CG14693 - chr3R_9_10805001 chr3R_10805001 RAL-426 2114 chr3R 10886856 10886904 chr3R 10886956 10887004 11 98 0.0 1.5 0.8 6.1 148 chr3R 10886856 intron Leash + chr3R 10886930 intron Leash + chr3R 10887004 intron Leash + chr3R_11_10885001 chr3R_10885001 RAL-426 2115 chr3R 10919671 10919718 chr3R 10919768 10919816 15 93 4.0 3.0 3.5 3.3 145 chr3R 10919671 intergenic not near genes chr3R 10919744 intergenic not near genes chr3R 10919816 intergenic not near genes chr3R_15_10915001 chr3R_10915001 RAL-426 2116 chr3R 10920045 10920078 chr3R 10920120 10920167 10 94 1.5 3.5 2.5 2.9 122 chr3R 10920045 intergenic not near genes chr3R 10920106 intergenic not near genes chr3R 10920167 intergenic not near genes chr3R_10_10920001 chr3R_10920001 RAL-426 2117 chr3R 10966695 10966738 chr3R 10966787 10966817 15 97 6.5 4.0 5.2 2.4 122 chr3R 10966695 intergenic not near genes chr3R 10966756 intergenic not near genes chr3R 10966817 intergenic not near genes chr3R_15_10965001 chr3R_10965001 RAL-426 2118 chr3R 11048567 11048598 chr3R 11048671 11048700 8 102 2.0 7.5 4.8 1.4 133 chr3R 11048567 3` UTR CG34114 + chr3R 11048634 3` UTR CG34114 + chr3R 11048700 3` UTR CG34114 + chr3R_8_11045001 chr3R_11045001 RAL-426 2119 chr3R 11056876 11056900 chr3R 11056974 11056998 6 98 3.0 0.0 1.5 2.4 122 chr3R 11056876 intergenic not near genes chr3R 11056937 intergenic not near genes chr3R 11056998 intergenic not near genes chr3R_6_11055001 chr3R_11055001 RAL-426 2120 chr3R 11058981 11059029 chr3R 11059115 11059162 7 131 1.0 5.5 3.2 1.7 181 chr3R 11058981 intergenic not near genes chr3R 11059072 intergenic not near genes chr3R 11059162 intergenic not near genes chr3R_7_11055001 chr3R_11055001 RAL-426 2121 chr3R 11059429 11059472 chr3R 11059525 11059568 10 95 4.5 3.0 3.8 2.1 139 chr3R 11059429 intergenic not near genes chr3R 11059498 intergenic not near genes chr3R 11059568 intergenic not near genes chr3R_10_11055001 chr3R_11055001 RAL-426 2122 chr3R 11085456 11085472 chr3R 11085553 11085569 5 96 4.5 3.5 4.0 1.0 113 chr3R 11085456 3` UTR CR44940 - chr3R 11085512 intergenic CR44940 - chr3R 11085569 intergenic CR44940 - chr3R_5_11085001 chr3R_11085001 RAL-426 2123 chr3R 11102314 11102337 chr3R 11102415 11102438 5 96 10.0 10.0 10.0 0.5 124 chr3R 11102314 intergenic not near genes chr3R 11102376 intergenic not near genes chr3R 11102438 intergenic not near genes chr3R_5_11100001 chr3R_11100001 RAL-426 2124 chr3R 11103152 11103164 chr3R 11103254 11103266 7 101 0.5 0.0 0.2 5.8 114 chr3R 11103152 intergenic not near genes chr3R 11103209 intergenic not near genes chr3R 11103266 intergenic not near genes chr3R_7_11100001 chr3R_11100001 RAL-426 2125 chr3R 11174578 11174615 chr3R 11175311 11175349 9 727 23.5 24.0 23.8 0.4 771 chr3R 11174578 exon Ugt86Dj - chr3R 11174964 intron Ugt86Dj - chr3R 11175349 exon Ugt86Dj - chr3R_9_11170001 chr3R_11170001 RAL-426 2126 chr3R 11379223 11379268 chr3R 11388398 11388424 roo 14 9172 6.0 8.5 7.2 1.7 9201 chr3R 11379223 intron pros + chr3R 11383824 intron pros + chr3R 11388424 intron pros + chr3R_14_11380001 chr3R_11380001 RAL-426 2127 chr3R 11455568 11455609 chr3R 11455713 11455751 11 143 3.5 6.0 4.8 1.9 183 chr3R 11455568 intron,intron CG17230 +,PGRP-LB - chr3R 11455660 intron,intron CG17230 +,PGRP-LB - chr3R 11455751 intron,intron CG17230 +,PGRP-LB - chr3R_11_11455001 chr3R_11455001 RAL-426 2128 chr3R 11461277 11461297 chr3R 11461348 11461393 6 93 1.5 3.0 2.2 1.9 116 chr3R 11461277 intron CG17230 + chr3R 11461335 intron CG17230 + chr3R 11461393 intron CG17230 + chr3R_6_11460001 chr3R_11460001 RAL-426 2129 chr3R 11468919 11468951 chr3R 11469006 11469055 10 94 2.5 2.5 2.5 2.9 136 chr3R 11468919 intergenic not near genes chr3R 11468987 intergenic not near genes chr3R 11469055 intergenic not near genes chr3R_10_11465001 chr3R_11465001 RAL-426 2130 chr3R 11491592 11491631 chr3R 11491687 11491727 8 95 1.5 3.5 2.5 2.3 135 chr3R 11491592 intergenic not near genes chr3R 11491660 intergenic not near genes chr3R 11491727 intergenic not near genes chr3R_8_11490001 chr3R_11490001 RAL-426 2131 chr3R 11648602 11648628 chr3R 11648717 11648764 6 133 4.0 8.0 6.0 0.9 162 chr3R 11648602 intron Csk - chr3R 11648683 intron Csk - chr3R 11648764 intron Csk - chr3R_6_11645001 chr3R_11645001 RAL-426 2132 chr3R 11694705 11694751 chr3R 11694817 11694864 17 111 1.5 8.0 4.8 2.9 159 chr3R 11694705 intergenic Fer3 - chr3R 11694784 intergenic Fer3 - chr3R 11694864 intergenic not near genes chr3R_17_11690001 chr3R_11690001 RAL-426 2133 chr3R 11734146 11734189 chr3R 11734285 11734305 5 127 5.0 4.0 4.5 0.9 159 chr3R 11734146 intergenic not near genes chr3R 11734226 intergenic not near genes chr3R 11734305 intergenic not near genes chr3R_5_11730001 chr3R_11730001 RAL-426 2134 chr3R 11830341 11830355 chr3R 11830445 11830459 4 104 3.5 4.0 3.8 0.8 118 chr3R 11830341 intron CG6959 - chr3R 11830400 intron CG6959 - chr3R 11830459 intron CG6959 - chr3R_4_11830001 chr3R_11830001 RAL-426 2135 chr3R 11841065 11841090 chr3R 11846250 11846268 BS 7 5184 3.5 3.5 3.5 1.6 5203 chr3R 11841065 intron CG6959 - chr3R 11843666 intron CG6959 - chr3R 11846268 intron CG6959 - chr3R_7_11840001 chr3R_11840001 RAL-426 2136 chr3R 12022865 12022908 chr3R 12025062 12025105 pogo 12 2196 4.5 2.5 3.5 2.7 2240 chr3R 12022865 intergenic not near genes chr3R 12023985 intergenic not near genes chr3R 12025105 intergenic not near genes chr3R_12_12020001 chr3R_12020001 RAL-426 2137 chr3R 12064264 12064293 chr3R 12064366 12064393 9 101 3.5 1.5 2.5 2.6 129 chr3R 12064264 intergenic not near genes chr3R 12064328 intergenic not near genes chr3R 12064393 intergenic not near genes chr3R_9_12060001 chr3R_12060001 RAL-426 2138 chr3R 12102869 12102885 chr3R 12102977 12102996 6 110 4.5 2.5 3.5 1.3 127 chr3R 12102869 intron dpr17 + chr3R 12102932 intron dpr17 + chr3R 12102996 intron dpr17 + chr3R_6_12100001 chr3R_12100001 RAL-426 2139 chr3R 12175005 12175041 chr3R 12175390 12175407 5 380 1.5 2.5 2.0 1.7 402 chr3R 12175005 intergenic not near genes chr3R 12175206 intergenic not near genes chr3R 12175407 intergenic not near genes chr3R_5_12175001 chr3R_12175001 RAL-426 2140 chr3R 12282210 12282260 chr3R 12282314 12282362 19 103 2.5 3.0 2.8 5.0 152 chr3R 12282210 intron svp + chr3R 12282286 intron svp + chr3R 12282362 intron svp + chr3R_19_12280001 chr3R_12280001 RAL-426 2141 chr3R 12522334 12522370 chr3R 12522438 12522475 4 101 7.5 2.0 4.8 0.7 141 chr3R 12522334 5` UTR Octbeta3R - chr3R 12522404 5` UTR Octbeta3R - chr3R 12522475 5` UTR Octbeta3R - chr3R_4_12520001 chr3R_12520001 RAL-426 2142 chr3R 12546437 12546486 chr3R 12546540 12546589 13 102 6.5 7.0 6.8 1.7 152 chr3R 12546437 intron Octbeta3R - chr3R 12546513 intron Octbeta3R - chr3R 12546589 intron Octbeta3R - chr3R_13_12545001 chr3R_12545001 RAL-426 2143 chr3R 12568487 12568524 chr3R 12568586 12568620 9 97 3.0 1.5 2.2 2.8 133 chr3R 12568487 intron Octbeta2R - chr3R 12568554 intron Octbeta2R - chr3R 12568620 intron Octbeta2R - chr3R_9_12565001 chr3R_12565001 RAL-426 2144 chr3R 12763114 12763155 chr3R 12763211 12763251 10 96 0.5 3.5 2.0 3.3 137 chr3R 12763114 intron beat-Vc - chr3R 12763182 intron beat-Vc - chr3R 12763251 intron beat-Vc - chr3R_10_12760001 chr3R_12760001 RAL-426 2145 chr3R 12778473 12778515 chr3R 12778574 12778616 9 100 2.5 5.0 3.8 1.9 143 chr3R 12778473 intron beat-Vc - chr3R 12778544 intron beat-Vc - chr3R 12778616 intron beat-Vc - chr3R_9_12775001 chr3R_12775001 RAL-426 2146 chr3R 12805843 12805882 chr3R 12805949 12805972 5 101 3.5 3.0 3.2 1.2 129 chr3R 12805843 intergenic not near genes chr3R 12805908 intergenic not near genes chr3R 12805972 intergenic not near genes chr3R_5_12805001 chr3R_12805001 RAL-426 2147 chr3R 12819006 12819048 chr3R 12819109 12819151 7 99 6.0 2.5 4.2 1.3 145 chr3R 12819006 intergenic not near genes chr3R 12819078 intergenic not near genes chr3R 12819151 intergenic not near genes chr3R_7_12815001 chr3R_12815001 RAL-426 2148 chr3R 12825586 12825634 chr3R 12825682 12825728 9 85 6.0 2.5 4.2 1.7 142 chr3R 12825586 intergenic not near genes chr3R 12825657 intergenic not near genes chr3R 12825728 intergenic not near genes chr3R_9_12825001 chr3R_12825001 RAL-426 2149 chr3R 12876939 12876976 chr3R 12877041 12877079 9 102 3.0 3.5 3.2 2.1 140 chr3R 12876939 intergenic not near genes chr3R 12877009 intergenic not near genes chr3R 12877079 intergenic not near genes chr3R_9_12875001 chr3R_12875001 RAL-426 2150 chr3R 12894588 12894625 chr3R 12894709 12894758 5 123 0.0 0.0 0.0 5.0 170 chr3R 12894588 intergenic not near genes chr3R 12894673 intergenic not near genes chr3R 12894758 intergenic not near genes chr3R_5_12890001 chr3R_12890001 RAL-426 2151 chr3R 12920148 12920178 chr3R 12925354 12925401 copia 9 5217 3.0 4.5 3.8 1.9 5253 chr3R 12920148 intron beat-Vb + chr3R 12922774 intron beat-Vb + chr3R 12925401 intron beat-Vb + chr3R_9_12920001 chr3R_12920001 RAL-426 2152 chr3R 12952273 12952300 chr3R 12952418 12952445 4 140 10.0 9.5 9.8 0.4 172 chr3R 12952273 intron grsm - chr3R 12952359 intron grsm - chr3R 12952445 intron grsm - chr3R_4_12950001 chr3R_12950001 RAL-426 2153 chr3R 12952301 12952310 chr3R 12952416 12952453 5 134 8.5 9.5 9.0 0.5 152 chr3R 12952301 intron grsm - chr3R 12952377 intron grsm - chr3R 12952453 intron grsm - chr3R_5_12950001 chr3R_12950001 RAL-426 2154 chr3R 12972537 12972581 chr3R 12972696 12972740 10 154 3.0 2.5 2.8 2.6 203 chr3R 12972537 intron CG7381 - chr3R 12972638 intron CG7381 - chr3R 12972740 intron CG7381 - chr3R_10_12970001 chr3R_12970001 RAL-426 2155 chr3R 13059942 13059972 chr3R 13060157 13060181 4 214 2.0 3.0 2.5 1.1 239 chr3R 13059942 intron sim + chr3R 13060062 intron sim + chr3R 13060181 intron sim + chr3R_4_13060001 chr3R_13060001 RAL-426 2156 chr3R 13066990 13067009 chr3R 13067097 13067114 5 106 3.5 1.0 2.2 1.6 124 chr3R 13066990 intron sim + chr3R 13067052 intron sim + chr3R 13067114 intron sim + chr3R_5_13065001 chr3R_13065001 RAL-426 2157 chr3R 13075347 13075382 chr3R 13075447 13075483 15 98 2.0 2.0 2.0 5.0 136 chr3R 13075347 intron sim + chr3R 13075415 intron sim + chr3R 13075483 intron sim + chr3R_15_13075001 chr3R_13075001 RAL-426 2158 chr3R 13104419 13104419 chr3R 21907535 21907536 6 8803117 28.0 24.5 26.2 0.2 8803117 chr3R 13104419 intron timeout + chr3R 17505978 intergenic Dscam3 - chr3R 21907536 intergenic CG6678 + chr3R_6_17505001 chr3R_17505001 RAL-426 2159 chr3R 13114378 13114423 chr3R 13114491 13114495 9 105 9.5 4.0 6.8 1.2 117 chr3R 13114378 intron timeout + chr3R 13114436 intron timeout + chr3R 13114495 intron timeout + chr3R_9_13110001 chr3R_13110001 RAL-426 2160 chr3R 13143020 13143064 chr3R 13148616 13148660 mdg3 14 5586 4.5 4.5 4.5 2.5 5640 chr3R 13143020 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145840 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148660 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_14_13145001 chr3R_13145001 RAL-426 2161 chr3R 13171912 13171952 chr3R 13172802 13172842 12 894 32.5 17.5 25.0 0.5 930 chr3R 13171912 intergenic not near genes chr3R 13172377 intergenic not near genes chr3R 13172842 intergenic not near genes chr3R_12_13170001 chr3R_13170001 RAL-426 2162 chr3R 13173429 13173474 chr3R 13173531 13173574 9 98 4.5 3.0 3.8 1.9 145 chr3R 13173429 intergenic not near genes chr3R 13173502 intergenic not near genes chr3R 13173574 intergenic not near genes chr3R_9_13170001 chr3R_13170001 RAL-426 2163 chr3R 13195937 13195974 chr3R 13196052 13196078 9 110 3.5 6.5 5.0 1.5 141 chr3R 13195937 intergenic not near genes chr3R 13196008 intergenic not near genes chr3R 13196078 intergenic not near genes chr3R_9_13195001 chr3R_13195001 RAL-426 2164 chr3R 13248631 13248668 chr3R 13248750 13248787 19 117 9.5 5.0 7.2 2.3 156 chr3R 13248631 intron Ace - chr3R 13248709 intron Ace - chr3R 13248787 intron Ace - chr3R_19_13245001 chr3R_13245001 RAL-426 2165 chr3R 13248671 13248680 chr3R 13248749 13248799 6 112 7.5 5.0 6.2 0.8 128 chr3R 13248671 intron Ace - chr3R 13248735 intron Ace - chr3R 13248799 intron Ace - chr3R_6_13245001 chr3R_13245001 RAL-426 2166 chr3R 13260706 13260748 chr3R 13260856 13260883 21 148 8.0 6.0 7.0 2.6 177 chr3R 13260706 intron CG11686 + chr3R 13260794 intron CG11686 + chr3R 13260883 intron CG11686 + chr3R_21_13260001 chr3R_13260001 RAL-426 2167 chr3R 13272036 13272072 chr3R 13272141 13272177 11 105 0.5 1.5 1.0 5.5 141 chr3R 13272036 intergenic CG8449 - chr3R 13272106 intergenic CG8449 - chr3R 13272177 intergenic CG8449 - chr3R_11_13270001 chr3R_13270001 RAL-426 2168 chr3R 13274198 13274210 chr3R 13274295 13274309 7 99 8.0 6.5 7.2 0.9 111 chr3R 13274198 intergenic not near genes chr3R 13274254 intergenic not near genes chr3R 13274309 intergenic not near genes chr3R_7_13270001 chr3R_13270001 RAL-426 2169 chr3R 13274212 13274249 chr3R 13274291 13274336 7 89 3.5 5.0 4.2 1.3 124 chr3R 13274212 intergenic not near genes chr3R 13274274 intergenic not near genes chr3R 13274336 intergenic not near genes chr3R_7_13270001 chr3R_13270001 RAL-426 2170 chr3R 13305638 13305686 chr3R 13305745 13305793 8 104 2.0 4.5 3.2 1.9 155 chr3R 13305638 intron CG32473 + chr3R 13305716 intron CG32473 + chr3R 13305793 intron CG32473 + chr3R_8_13305001 chr3R_13305001 RAL-426 2171 chr3R 13306101 13306153 chr3R 13306508 13306557 24 404 2.5 4.0 3.2 5.7 456 chr3R 13306101 intron CG32473 + chr3R 13306329 intron CG32473 + chr3R 13306557 intron CG32473 + chr3R_24_13305001 chr3R_13305001 RAL-426 2172 chr3R 13323939 13323985 chr3R 13324069 13324115 17 125 2.5 2.5 2.5 4.9 176 chr3R 13323939 intergenic not near genes chr3R 13324027 intergenic not near genes chr3R 13324115 intergenic not near genes chr3R_17_13320001 chr3R_13320001 RAL-426 2173 chr3R 13326915 13326961 chr3R 13327029 13327076 10 110 3.5 1.5 2.5 2.9 161 chr3R 13326915 intergenic not near genes chr3R 13326996 intergenic not near genes chr3R 13327076 intergenic not near genes chr3R_10_13325001 chr3R_13325001 RAL-426 2174 chr3R 13356072 13356119 chr3R 13356176 13356223 14 102 5.0 5.0 5.0 2.3 151 chr3R 13356072 intergenic not near genes chr3R 13356148 intergenic not near genes chr3R 13356223 intergenic not near genes chr3R_14_13355001 chr3R_13355001 RAL-426 2175 chr3R 13391626 13391664 chr3R 13391715 13391762 18 96 7.0 7.0 7.0 2.2 136 chr3R 13391626 intron CCHa2 - chr3R 13391694 intron CCHa2 - chr3R 13391762 intron CCHa2 - chr3R_18_13390001 chr3R_13390001 RAL-426 2176 chr3R 13496617 13496662 chr3R 13496710 13496760 8 94 4.5 5.5 5.0 1.3 143 chr3R 13496617 intergenic not near genes chr3R 13496688 intergenic not near genes chr3R 13496760 intergenic not near genes chr3R_8_13495001 chr3R_13495001 RAL-426 2177 chr3R 13526678 13526706 chr3R 13526777 13526805 6 98 2.0 0.5 1.2 2.7 127 chr3R 13526678 intergenic not near genes chr3R 13526742 intergenic not near genes chr3R 13526805 intergenic not near genes chr3R_6_13525001 chr3R_13525001 RAL-426 2178 chr3R 13603035 13603076 chr3R 13603146 13603167 9 108 5.5 3.0 4.2 1.7 132 chr3R 13603035 intergenic not near genes chr3R 13603101 intergenic not near genes chr3R 13603167 intergenic not near genes chr3R_9_13600001 chr3R_13600001 RAL-426 2179 chr3R 13668282 13668298 chr3R 13668349 13668371 4 73 4.0 4.0 4.0 0.8 89 chr3R 13668282 3` UTR Task6 - chr3R 13668326 3` UTR Task6 - chr3R 13668371 3` UTR Task6 - chr3R_4_13665001 chr3R_13665001 RAL-426 2180 chr3R 13672929 13672944 chr3R 13673026 13673035 6 95 9.0 8.0 8.5 0.6 106 chr3R 13672929 intron Task6 - chr3R 13672982 intron Task6 - chr3R 13673035 intron Task6 - chr3R_6_13670001 chr3R_13670001 RAL-426 2181 chr3R 13672946 13672972 chr3R 13673025 13673070 15 95 3.0 7.5 5.2 2.4 124 chr3R 13672946 intron Task6 - chr3R 13673008 intron Task6 - chr3R 13673070 intron Task6 - chr3R_15_13670001 chr3R_13670001 RAL-426 2182 chr3R 13693028 13693028 chr3R 21907534 21907535 7 8214506 12.0 24.0 18.0 0.4 8214507 chr3R 13693028 3` UTR flfl + chr3R 17800282 exon CG17803 - chr3R 21907535 intergenic CG6678 + chr3R_7_17800001 chr3R_17800001 RAL-426 2183 chr3R 13901066 13901088 chr3R 13901177 13901184 10 108 2.0 4.5 3.2 2.4 118 chr3R 13901066 intergenic not near genes chr3R 13901125 intergenic not near genes chr3R 13901184 intergenic not near genes chr3R_10_13900001 chr3R_13900001 RAL-426 2184 chr3R 13975360 13975409 chr3R 13975460 13975509 10 95 5.0 5.5 5.2 1.6 149 chr3R 13975360 intron rdx - chr3R 13975434 intron rdx - chr3R 13975509 intron rdx - chr3R_10_13975001 chr3R_13975001 RAL-426 2185 chr3R 14021627 14021674 chr3R 14023464 14023511 S-element 6 1835 5.5 5.5 5.5 0.9 1884 chr3R 14021627 intron rdx - chr3R 14022569 intron rdx - chr3R 14023511 intron rdx - chr3R_6_14020001 chr3R_14020001 RAL-426 2186 chr3R 14029843 14029864 chr3R 14029950 14029971 6 108 1.0 4.5 2.8 1.6 128 chr3R 14029843 intron,intron rdx -,Cyp6d5 + chr3R 14029907 intron,intron rdx -,Cyp6d5 + chr3R 14029971 intron,intron rdx -,Cyp6d5 + chr3R_6_14025001 chr3R_14025001 RAL-426 2187 chr3R 14037572 14037587 chr3R 14037669 14037688 6 99 4.5 8.5 6.5 0.8 116 chr3R 14037572 intergenic not near genes chr3R 14037630 intergenic not near genes chr3R 14037688 intergenic not near genes chr3R_6_14035001 chr3R_14035001 RAL-426 2188 chr3R 14058103 14058151 chr3R 14058243 14058291 10 138 3.0 3.0 3.0 2.5 188 chr3R 14058103 5` UTR foxo + chr3R 14058197 intron foxo + chr3R 14058291 intron foxo + chr3R_10_14055001 chr3R_14055001 RAL-426 2189 chr3R 14067129 14067154 chr3R 14067228 14067253 10 97 3.0 0.0 1.5 4.0 124 chr3R 14067129 exon foxo + chr3R 14067191 intron foxo + chr3R 14067253 intron foxo + chr3R_10_14065001 chr3R_14065001 RAL-426 2190 chr3R 14093808 14093818 chr3R 14093913 14093923 4 105 0.0 8.5 4.2 0.8 115 chr3R 14093808 intron CCHa1 - chr3R 14093866 intron CCHa1 - chr3R 14093923 intron CCHa1 - chr3R_4_14090001 chr3R_14090001 RAL-426 2191 chr3R 14169731 14169749 chr3R 14169834 14169852 4 103 0.0 1.0 0.5 2.7 121 chr3R 14169731 3` UTR Dop1R1 - chr3R 14169792 3` UTR Dop1R1 - chr3R 14169852 3` UTR Dop1R1 - chr3R_4_14165001 chr3R_14165001 RAL-426 2192 chr3R 14169754 14169765 chr3R 14169821 14169866 6 90 0.0 0.5 0.2 5.0 112 chr3R 14169754 3` UTR Dop1R1 - chr3R 14169810 3` UTR Dop1R1 - chr3R 14169866 3` UTR Dop1R1 - chr3R_6_14165001 chr3R_14165001 RAL-426 2193 chr3R 14170139 14170170 chr3R 14170247 14170280 8 105 1.5 2.5 2.0 2.7 141 chr3R 14170139 3` UTR Dop1R1 - chr3R 14170210 3` UTR Dop1R1 - chr3R 14170280 3` UTR Dop1R1 - chr3R_8_14170001 chr3R_14170001 RAL-426 2194 chr3R 14180791 14180818 chr3R 14185576 14185577 F-element 7 4780 7.5 0.0 3.8 1.5 4786 chr3R 14180791 intron Dop1R1 - chr3R 14183184 intron Dop1R1 - chr3R 14185577 intron Dop1R1 - chr3R_7_14180001 chr3R_14180001 RAL-426 2195 chr3R 14246401 14246411 chr3R 14247893 14247926 jockey 5 1501 6.0 6.5 6.2 0.7 1525 chr3R 14246401 intergenic not near genes chr3R 14247164 intergenic not near genes chr3R 14247926 intergenic not near genes chr3R_5_14245001 chr3R_14245001 RAL-426 2196 chr3R 14327675 14327724 chr3R 14327772 14327826 14 101 1.5 2.5 2.0 4.7 151 chr3R 14327675 3` UTR CG3321 + chr3R 14327750 intergenic CG3321 +,spn-B + chr3R 14327826 intergenic CG3321 +,spn-B + chr3R_14_14325001 chr3R_14325001 RAL-426 2197 chr3R 14339596 14339643 chr3R 14339762 14339808 12 164 2.0 2.0 2.0 4.0 212 chr3R 14339596 intron NK7.1 - chr3R 14339702 intron NK7.1 - chr3R 14339808 intron NK7.1 - chr3R_12_14335001 chr3R_14335001 RAL-426 2198 chr3R 14414680 14414726 chr3R 14414801 14414847 18 115 4.0 3.0 3.5 4.0 167 chr3R 14414680 intron cv-c - chr3R 14414764 intron cv-c - chr3R 14414847 intron cv-c - chr3R_18_14410001 chr3R_14410001 RAL-426 2199 chr3R 14440712 14440754 chr3R 14440808 14440850 15 95 1.5 3.5 2.5 4.3 138 chr3R 14440712 intron cv-c - chr3R 14440781 intron cv-c - chr3R 14440850 intron cv-c - chr3R_15_14440001 chr3R_14440001 RAL-426 2200 chr3R 14527395 14527399 chr3R 14527492 14527496 4 96 10.0 9.0 9.5 0.4 101 chr3R 14527395 intron Pde6 - chr3R 14527446 intron Pde6 - chr3R 14527496 intron Pde6 - chr3R_4_14525001 chr3R_14525001 RAL-426 2201 chr3R 14527401 14527411 chr3R 14527488 14527507 5 93 7.5 8.5 8.0 0.6 106 chr3R 14527401 intron Pde6 - chr3R 14527454 intron Pde6 - chr3R 14527507 intron Pde6 - chr3R_5_14525001 chr3R_14525001 RAL-426 2202 chr3R 14549029 14549051 chr3R 14549122 14549145 4 95 3.5 4.0 3.8 0.8 116 chr3R 14549029 intron Pde6 - chr3R 14549087 intron Pde6 - chr3R 14549145 intron Pde6 - chr3R_4_14545001 chr3R_14545001 RAL-426 2203 chr3R 14608452 14608476 chr3R 14608564 14608588 9 112 4.0 5.5 4.8 1.6 136 chr3R 14608452 intergenic stumps + chr3R 14608520 intergenic stumps + chr3R 14608588 intergenic not near genes chr3R_9_14605001 chr3R_14605001 RAL-426 2204 chr3R 14704371 14704413 chr3R 14704465 14704479 13 92 4.0 5.5 4.8 2.2 108 chr3R 14704371 intron kibra - chr3R 14704425 intron kibra - chr3R 14704479 intron kibra - chr3R_13_14700001 chr3R_14700001 RAL-426 2205 chr3R 14764552 14764588 chr3R 14764670 14764708 4 119 1.0 1.0 1.0 2.0 156 chr3R 14764552 intron jvl + chr3R 14764630 intron jvl + chr3R 14764708 intron jvl + chr3R_4_14760001 chr3R_14760001 RAL-426 2206 chr3R 14804759 14804795 chr3R 14804872 14804908 10 111 5.0 2.0 3.5 2.2 149 chr3R 14804759 3` UTR btsz - chr3R 14804834 3` UTR btsz - chr3R 14804908 3` UTR btsz - chr3R_10_14800001 chr3R_14800001 RAL-426 2207 chr3R 14821602 14821639 chr3R 14821770 14821808 6 169 3.5 3.0 3.2 1.4 206 chr3R 14821602 intron btsz - chr3R 14821705 intron btsz - chr3R 14821808 intron btsz - chr3R_6_14820001 chr3R_14820001 RAL-426 2208 chr3R 14869842 14869892 chr3R 14869953 14870002 23 108 3.0 4.0 3.5 5.1 160 chr3R 14869842 intron btsz - chr3R 14869922 intron btsz - chr3R 14870002 intron btsz - chr3R_23_14865001 chr3R_14865001 RAL-426 2209 chr3R 14898459 14898503 chr3R 14898598 14898643 14 140 2.5 4.0 3.2 3.3 184 chr3R 14898459 intergenic Nup93-2 -,CG3817 + chr3R 14898551 intergenic Nup93-2 -,CG3817 + chr3R 14898643 intergenic CG3817 +,Nup93-2 - chr3R_14_14895001 chr3R_14895001 RAL-426 2210 chr3R 14953968 14954014 chr3R 14954093 14954138 6 123 4.0 4.0 4.0 1.2 170 chr3R 14953968 intergenic not near genes chr3R 14954053 intergenic not near genes chr3R 14954138 intergenic not near genes chr3R_6_14950001 chr3R_14950001 RAL-426 2211 chr3R 15026311 15026345 chr3R 15026417 15026438 14 105 2.5 3.5 3.0 3.5 127 chr3R 15026311 intergenic not near genes chr3R 15026374 intergenic not near genes chr3R 15026438 intergenic not near genes chr3R_14_15025001 chr3R_15025001 RAL-426 2212 chr3R 15059262 15059268 chr3R 15059476 15059479 BS 6 213 1.5 0.0 0.8 3.3 217 chr3R 15059262 intron dpr9 - chr3R 15059370 intron dpr9 - chr3R 15059479 intron dpr9 - chr3R_6_15055001 chr3R_15055001 RAL-426 2213 chr3R 15059271 15059480 chr3R 15059469 15059579 BS 8 168 0.0 0.5 0.2 6.7 308 chr3R 15059271 intron dpr9 - chr3R 15059425 intron dpr9 - chr3R 15059579 intron dpr9 - chr3R_8_15055001 chr3R_15055001 RAL-426 2214 chr3R 15079793 15079808 chr3R 15080053 15080069 pogo 5 259 8.0 3.5 5.8 0.7 276 chr3R 15079793 3` UTR CG6966 - chr3R 15079931 3` UTR CG6966 - chr3R 15080069 3` UTR CG6966 - chr3R_5_15075001 chr3R_15075001 RAL-426 2215 chr3R 15079811 15079839 chr3R 15080052 15080100 pogo 6 257 6.5 3.5 5.0 1.0 289 chr3R 15079811 3` UTR CG6966 - chr3R 15079956 3` UTR CG6966 - chr3R 15080100 3` UTR CG6966 - chr3R_6_15075001 chr3R_15075001 RAL-426 2216 chr3R 15088052 15088098 chr3R 15088170 15088201 4 108 6.0 0.0 3.0 1.0 149 chr3R 15088052 intron CG6966 - chr3R 15088126 intron CG6966 - chr3R 15088201 intron CG6966 - chr3R_4_15085001 chr3R_15085001 RAL-426 2217 chr3R 15102480 15102528 chr3R 15109755 15109803 412 9 7274 5.0 5.5 5.2 1.5 7323 chr3R 15102480 intron CG42788 - chr3R 15106142 intron CG42788 - chr3R 15109803 intron CG42788 - chr3R_9_15105001 chr3R_15105001 RAL-426 2218 chr3R 15114895 15114927 chr3R 15114990 15115023 5 96 4.5 2.0 3.2 1.2 128 chr3R 15114895 intron CG42788 - chr3R 15114959 intron CG42788 - chr3R 15115023 intron CG42788 - chr3R_5_15110001 chr3R_15110001 RAL-426 2219 chr3R 15162529 15162568 chr3R 15167315 15167355 F-element 15 4783 5.5 6.5 6.0 2.1 4826 chr3R 15162529 intron Gyc88E + chr3R 15164942 intron Gyc88E + chr3R 15167355 intron Gyc88E + chr3R_15_15160001 chr3R_15160001 RAL-426 2220 chr3R 15225287 15225325 chr3R 15225383 15225395 5 88 3.0 8.0 5.5 0.8 108 chr3R 15225287 5` UTR CG31344 - chr3R 15225341 intergenic CG31344 -,Caf1 + chr3R 15225395 intergenic CG31344 -,Caf1 + chr3R_5_15225001 chr3R_15225001 RAL-426 2221 chr3R 15268177 15268195 chr3R 15268570 15268599 10 399 1.0 3.0 2.0 3.3 422 chr3R 15268177 exon CG14864 - chr3R 15268388 intron CG14864 - chr3R 15268599 intergenic CG14864 -,Zip88E + chr3R_10_15265001 chr3R_15265001 RAL-426 2222 chr3R 15286987 15286988 chr3R 21907534 21907535 8 6620548 13.0 24.0 18.5 0.4 6620548 chr3R 15286987 intron Tm1 + chr3R 18597261 intron,exon qin +,CG14304 - chr3R 21907535 intergenic CG6678 + chr3R_8_18595001 chr3R_18595001 RAL-426 2223 chr3R 15416247 15416271 chr3R 15416331 15416370 8 95 4.0 5.0 4.5 1.5 123 chr3R 15416247 3` UTR Atx2 + chr3R 15416308 3` UTR Atx2 + chr3R 15416370 3` UTR Atx2 + chr3R_8_15415001 chr3R_15415001 RAL-426 2224 chr3R 15566396 15566448 chr3R 15566499 15566552 10 103 0.5 4.5 2.5 2.9 156 chr3R 15566396 intergenic not near genes chr3R 15566474 intergenic not near genes chr3R 15566552 intergenic not near genes chr3R_10_15565001 chr3R_15565001 RAL-426 2225 chr3R 15594656 15594675 chr3R 15594758 15594778 8 102 0.0 10.0 5.0 1.3 122 chr3R 15594656 intergenic not near genes chr3R 15594717 intergenic not near genes chr3R 15594778 intergenic not near genes chr3R_8_15590001 chr3R_15590001 RAL-426 2226 chr3R 15601165 15601196 chr3R 15608685 15608691 412 9 7528 8.5 8.5 8.5 0.9 7526 chr3R 15601165 intergenic not near genes chr3R 15604928 intergenic not near genes chr3R 15608691 intergenic not near genes chr3R_9_15600001 chr3R_15600001 RAL-426 2227 chr3R 15635188 15635239 chr3R 15635329 15635370 7 135 0.0 2.0 1.0 3.5 182 chr3R 15635188 intergenic CG43335 + chr3R 15635279 intergenic CG43335 + chr3R 15635370 intergenic CG43335 + chr3R_7_15635001 chr3R_15635001 RAL-426 2228 chr3R 15691168 15691330 chr3R 15691293 15691434 12 114 0.0 0.0 0.0 12.0 266 chr3R 15691168 intergenic not near genes chr3R 15691301 intergenic not near genes chr3R 15691434 intergenic not near genes chr3R_12_15690001 chr3R_15690001 RAL-426 2229 chr3R 15702869 15702891 chr3R 15703058 15703073 4 198 0.0 4.0 2.0 1.3 204 chr3R 15702869 intergenic not near genes chr3R 15702971 intergenic not near genes chr3R 15703073 intergenic not near genes chr3R_4_15700001 chr3R_15700001 RAL-426 2230 chr3R 15868927 15868933 chr3R 15869024 15869033 4 99 7.5 0.0 3.8 0.8 106 chr3R 15868927 intron CG31183 - chr3R 15868980 intron CG31183 - chr3R 15869033 intron CG31183 - chr3R_4_15865001 chr3R_15865001 RAL-426 2231 chr3R 15878088 15878098 chr3R 15878196 15878206 4 108 0.5 1.5 1.0 2.0 118 chr3R 15878088 intergenic not near genes chr3R 15878147 intergenic not near genes chr3R 15878206 intergenic not near genes chr3R_4_15875001 chr3R_15875001 RAL-426 2232 chr3R 16195537 16195580 chr3R 16195778 16195821 10 237 2.5 1.5 2.0 3.3 284 chr3R 16195537 intron sra + chr3R 16195679 intron sra + chr3R 16195821 intron sra + chr3R_10_16195001 chr3R_16195001 RAL-426 2233 chr3R 16225073 16225119 chr3R 16225178 16225220 8 103 3.0 4.0 3.5 1.8 147 chr3R 16225073 intergenic not near genes chr3R 16225146 intergenic not near genes chr3R 16225220 intergenic tara + chr3R_8_16225001 chr3R_16225001 RAL-426 2234 chr3R 16472564 16472580 chr3R 16472657 16472675 4 92 11.0 5.0 8.0 0.4 111 chr3R 16472564 intergenic Gyc-89Da + chr3R 16472620 5` UTR Gyc-89Da + chr3R 16472675 5` UTR Gyc-89Da + chr3R_4_16470001 chr3R_16470001 RAL-426 2235 chr3R 16472594 16472595 chr3R 16472655 16472668 4 71 9.5 5.5 7.5 0.5 74 chr3R 16472594 intergenic Gyc-89Da + chr3R 16472631 5` UTR Gyc-89Da + chr3R 16472668 5` UTR Gyc-89Da + chr3R_4_16470001 chr3R_16470001 RAL-426 2236 chr3R 16601398 16601427 chr3R 16601510 16601537 8 109 6.5 6.0 6.2 1.1 139 chr3R 16601398 intron CG10345 - chr3R 16601468 intron CG10345 - chr3R 16601537 intron CG10345 - chr3R_8_16600001 chr3R_16600001 RAL-426 2237 chr3R 16611513 16611515 chr3R 24178470 24178484 4 7566966 17.0 10.5 13.8 0.3 7566971 chr3R 16611513 3` UTR CG12783 - chr3R 20394998 intron Gfrl - chr3R 24178484 intron CG13606 + chr3R_4_20390001 chr3R_20390001 RAL-426 2238 chr3R 16708572 16708612 chr3R 16708768 16708808 8 191 2.0 5.0 3.5 1.8 236 chr3R 16708572 intron Ubx - chr3R 16708690 intron Ubx - chr3R 16708808 intron Ubx - chr3R_8_16705001 chr3R_16705001 RAL-426 2239 chr3R 16732139 16732178 chr3R 16732253 16732294 6 115 0.0 6.0 3.0 1.5 155 chr3R 16732139 intron Ubx - chr3R 16732216 intron Ubx - chr3R 16732294 intron Ubx - chr3R_6_16730001 chr3R_16730001 RAL-426 2240 chr3R 16756301 16756346 chr3R 16762512 16762517 diver 8 6193 2.5 2.5 2.5 2.3 6216 chr3R 16756301 intron bxd - chr3R 16759409 intron bxd - chr3R 16762517 intron bxd - chr3R_8_16755001 chr3R_16755001 RAL-426 2241 chr3R 16820248 16820277 chr3R 16820347 16820388 7 107 2.0 1.0 1.5 2.8 140 chr3R 16820248 intron abd-A - chr3R 16820318 intron abd-A - chr3R 16820388 intron abd-A - chr3R_7_16820001 chr3R_16820001 RAL-426 2242 chr3R 16860317 16860364 chr3R 16860414 16860462 9 91 1.0 0.5 0.8 5.0 145 chr3R 16860317 intron iab-8 - chr3R 16860390 intron iab-8 - chr3R 16860462 intron iab-8 - chr3R_9_16860001 chr3R_16860001 RAL-426 2243 chr3R 17065001 17065049 chr3R 17065315 17065339 7 304 4.0 2.0 3.0 1.8 338 chr3R 17065001 intron Dad + chr3R 17065170 intron Dad + chr3R 17065339 intron Dad + chr3R_7_17065001 chr3R_17065001 RAL-426 2244 chr3R 17065544 17065598 chr3R 17065838 17065873 7 284 6.0 4.0 5.0 1.2 329 chr3R 17065544 intron Dad + chr3R 17065708 intron Dad + chr3R 17065873 intron Dad + chr3R_7_17065001 chr3R_17065001 RAL-426 2245 chr3R 17121502 17121556 chr3R 17121716 17121755 18 211 2.5 3.5 3.0 4.5 253 chr3R 17121502 intron cher - chr3R 17121628 intron,exon cher -,CG42779 + chr3R 17121755 intron,exon cher -,CG42779 + chr3R_18_17120001 chr3R_17120001 RAL-426 2246 chr3R 17178596 17178635 chr3R 17178893 17178932 7 296 2.5 4.0 3.2 1.7 336 chr3R 17178596 intron Mur89F - chr3R 17178764 intron Mur89F - chr3R 17178932 intron Mur89F - chr3R_7_17175001 chr3R_17175001 RAL-426 2247 chr3R 17294658 17294693 chr3R 17295097 17295141 BS 10 445 6.5 5.5 6.0 1.4 483 chr3R 17294658 intergenic not near genes chr3R 17294900 intergenic not near genes chr3R 17295141 intergenic not near genes chr3R_10_17290001 chr3R_17290001 RAL-426 2248 chr3R 17335146 17335184 chr3R 17335240 17335279 6 95 4.0 2.5 3.2 1.4 133 chr3R 17335146 intron beat-IIa - chr3R 17335212 intron beat-IIa - chr3R 17335279 intron beat-IIa - chr3R_6_17335001 chr3R_17335001 RAL-426 2249 chr3R 17346683 17346722 chr3R 17348264 17348304 F-element 8 1583 0.5 5.5 3.0 2.0 1621 chr3R 17346683 intron beat-IIa - chr3R 17347494 intron beat-IIa - chr3R 17348304 intron beat-IIa - chr3R_8_17345001 chr3R_17345001 RAL-426 2250 chr3R 17348707 17348752 chr3R 17348814 17348841 13 99 3.5 3.0 3.2 3.1 134 chr3R 17348707 intron beat-IIa - chr3R 17348774 intron beat-IIa - chr3R 17348841 intron beat-IIa - chr3R_13_17345001 chr3R_17345001 RAL-426 2251 chr3R 17389054 17389054 chr3R 21907534 21907534 4 4518480 7.0 24.0 15.5 0.2 4518480 chr3R 17389054 intron,3` UTR Brf -,lute + chr3R 19648294 5` UTR CG6195 - chr3R 21907534 intergenic CG6678 + chr3R_4_19645001 chr3R_19645001 RAL-426 2252 chr3R 17406988 17407030 chr3R 17407110 17407152 5 120 3.5 7.5 5.5 0.8 164 chr3R 17406988 intron CG42798 + chr3R 17407070 5` UTR CG42798 + chr3R 17407152 exon CG42798 + chr3R_5_17405001 chr3R_17405001 RAL-426 2253 chr3R 17461188 17461231 chr3R 17461288 17461333 14 101 0.5 4.5 2.5 4.0 145 chr3R 17461188 intergenic not near genes chr3R 17461260 intergenic not near genes chr3R 17461333 intergenic not near genes chr3R_14_17460001 chr3R_17460001 RAL-426 2254 chr3R 17472300 17472309 chr3R 17472425 17472434 4 125 10.0 6.0 8.0 0.4 134 chr3R 17472300 intergenic not near genes chr3R 17472367 intergenic not near genes chr3R 17472434 intergenic not near genes chr3R_4_17470001 chr3R_17470001 RAL-426 2255 chr3R 17472311 17472343 chr3R 17472419 17472462 12 111 3.5 5.0 4.2 2.3 151 chr3R 17472311 intergenic not near genes chr3R 17472386 intergenic not near genes chr3R 17472462 intergenic not near genes chr3R_12_17470001 chr3R_17470001 RAL-426 2256 chr3R 17492581 17492607 chr3R 17492673 17492688 4 96 3.0 0.5 1.8 1.4 107 chr3R 17492581 exon Dscam3 - chr3R 17492634 intron Dscam3 - chr3R 17492688 intron Dscam3 - chr3R_4_17490001 chr3R_17490001 RAL-426 2257 chr3R 17546086 17546108 chr3R 17546167 17546173 4 83 3.5 4.0 3.8 0.8 87 chr3R 17546086 intron Prx3 - chr3R 17546130 intron Prx3 - chr3R 17546173 intron Prx3 - chr3R_4_17545001 chr3R_17545001 RAL-426 2258 chr3R 17587204 17587243 chr3R 17587406 17587445 12 196 4.5 8.5 6.5 1.6 241 chr3R 17587204 intergenic not near genes chr3R 17587324 intergenic not near genes chr3R 17587445 intergenic not near genes chr3R_12_17585001 chr3R_17585001 RAL-426 2259 chr3R 17591270 17591326 chr3R 17591723 17591738 F-element 6 438 2.5 4.0 3.2 1.4 468 chr3R 17591270 intergenic not near genes chr3R 17591504 intergenic not near genes chr3R 17591738 intergenic not near genes chr3R_6_17590001 chr3R_17590001 RAL-426 2260 chr3R 17638297 17638346 chr3R 17638803 17638852 roo 8 504 5.0 3.5 4.2 1.5 555 chr3R 17638297 intron CG43175 + chr3R 17638574 intron CG43175 + chr3R 17638852 intron,intron CG43175 +,CR45222 + chr3R_8_17635001 chr3R_17635001 RAL-426 2261 chr3R 17647235 17647274 chr3R 17647352 17647391 8 116 1.0 3.5 2.2 2.5 156 chr3R 17647235 intergenic CG14322 + chr3R 17647313 intergenic CG14322 + chr3R 17647391 intergenic CG14322 + chr3R_8_17645001 chr3R_17645001 RAL-426 2262 chr3R 17773376 17773392 chr3R 17773475 17773492 9 98 5.0 3.5 4.2 1.7 116 chr3R 17773376 intron CG43102 - chr3R 17773434 intron CG43102 - chr3R 17773492 exon CG43102 - chr3R_9_17770001 chr3R_17770001 RAL-426 2263 chr3R 17823191 17823219 chr3R 17823295 17823324 5 103 1.5 2.5 2.0 1.7 133 chr3R 17823191 intron tinc + chr3R 17823258 intron tinc + chr3R 17823324 intron tinc + chr3R_5_17820001 chr3R_17820001 RAL-426 2264 chr3R 17895328 17895376 chr3R 17895434 17895487 6 110 3.0 2.0 2.5 1.7 159 chr3R 17895328 intron Rim - chr3R 17895408 intron Rim - chr3R 17895487 intron Rim - chr3R_6_17895001 chr3R_17895001 RAL-426 2265 chr3R 17925865 17925876 chr3R 17927344 17927349 hobo 4 1481 9.5 6.5 8.0 0.4 1484 chr3R 17925865 intron cpo + chr3R 17926607 intron cpo + chr3R 17927349 intron cpo + chr3R_4_17925001 chr3R_17925001 RAL-426 2266 chr3R 17925879 17925888 chr3R 17927317 17927345 hobo 4 1455 5.5 6.0 5.8 0.6 1466 chr3R 17925879 intron cpo + chr3R 17926612 intron cpo + chr3R 17927345 intron cpo + chr3R_4_17925001 chr3R_17925001 RAL-426 2267 chr3R 17983200 17983218 chr3R 17983293 17983314 4 92 7.5 2.0 4.8 0.7 114 chr3R 17983200 intron cpo + chr3R 17983257 intron cpo + chr3R 17983314 intron cpo + chr3R_4_17980001 chr3R_17980001 RAL-426 2268 chr3R 17989336 17989361 chr3R 17989432 17989457 4 95 6.0 7.0 6.5 0.5 121 chr3R 17989336 intron cpo + chr3R 17989396 intron cpo + chr3R 17989457 intron cpo + chr3R_4_17985001 chr3R_17985001 RAL-426 2269 chr3R 18061571 18061602 chr3R 18063159 18063190 F-element 6 1587 4.0 3.5 3.8 1.2 1619 chr3R 18061571 intergenic not near genes chr3R 18062380 intergenic not near genes chr3R 18063190 intergenic not near genes chr3R_6_18060001 chr3R_18060001 RAL-426 2270 chr3R 18065633 18065666 chr3R 18065752 18065797 5 119 1.0 2.5 1.8 1.8 164 chr3R 18065633 intergenic not near genes chr3R 18065715 intergenic not near genes chr3R 18065797 intergenic not near genes chr3R_5_18065001 chr3R_18065001 RAL-426 2271 chr3R 18122877 18122911 chr3R 18122974 18123006 4 96 1.5 2.0 1.8 1.4 129 chr3R 18122877 intron sr + chr3R 18122942 intron sr + chr3R 18123006 intron sr + chr3R_4_18120001 chr3R_18120001 RAL-426 2272 chr3R 18143565 18143582 chr3R 18143674 18143691 4 109 4.0 6.0 5.0 0.7 126 chr3R 18143565 intergenic not near genes chr3R 18143628 intergenic not near genes chr3R 18143691 intergenic not near genes chr3R_4_18140001 chr3R_18140001 RAL-426 2273 chr3R 18215743 18215770 chr3R 18215931 18215959 11 186 0.5 4.0 2.2 3.4 216 chr3R 18215743 intergenic CG14314 + chr3R 18215851 intergenic CG14314 + chr3R 18215959 intergenic CG14314 + chr3R_11_18215001 chr3R_18215001 RAL-426 2274 chr3R 18275509 18275564 chr3R 18275627 18275629 7 108 3.0 3.0 3.0 1.8 120 chr3R 18275509 intron eIF-1A + chr3R 18275569 intron eIF-1A + chr3R 18275629 intron eIF-1A + chr3R_7_18275001 chr3R_18275001 RAL-426 2275 chr3R 18279988 18280028 chr3R 18280090 18280142 6 111 4.5 0.0 2.2 1.9 154 chr3R 18279988 intron eIF-1A + chr3R 18280065 intron eIF-1A + chr3R 18280142 intron eIF-1A + chr3R_6_18280001 chr3R_18280001 RAL-426 2276 chr3R 18494072 18494101 chr3R 18494179 18494223 5 116 1.5 4.0 2.8 1.3 151 chr3R 18494072 intron fru - chr3R 18494148 intron fru - chr3R 18494223 intron fru - chr3R_5_18490001 chr3R_18490001 RAL-426 2277 chr3R 18538328 18538360 chr3R 18538433 18538457 6 104 0.5 2.0 1.2 2.7 129 chr3R 18538328 intron fru - chr3R 18538392 intron fru - chr3R 18538457 intron fru - chr3R_6_18535001 chr3R_18535001 RAL-426 2278 chr3R 18606504 18606526 chr3R 18610746 18610768 F-element 7 4241 2.0 0.5 1.2 3.2 4264 chr3R 18606504 intron,intron qin +,CG14304 - chr3R 18608636 intron,intron qin +,CG14304 - chr3R 18610768 intron,intron qin +,CG14304 - chr3R_7_18605001 chr3R_18605001 RAL-426 2279 chr3R 18617703 18617741 chr3R 18617803 18617841 4 100 1.0 4.0 2.5 1.1 138 chr3R 18617703 intron,intron qin +,CG14304 - chr3R 18617772 intron,intron qin +,CG14304 - chr3R 18617841 intron,intron qin +,CG14304 - chr3R_4_18615001 chr3R_18615001 RAL-426 2280 chr3R 18618246 18618294 chr3R 18618351 18618398 10 103 0.0 3.5 1.8 3.6 152 chr3R 18618246 intron,intron qin +,CG14304 - chr3R 18618322 intron,intron qin +,CG14304 - chr3R 18618398 intron,intron qin +,CG14304 - chr3R_10_18615001 chr3R_18615001 RAL-426 2281 chr3R 18628865 18629033 chr3R 18629009 18629142 6 121 0.0 0.0 0.0 6.0 277 chr3R 18628865 intron qin + chr3R 18629004 intron qin + chr3R 18629142 intron qin + chr3R_6_18625001 chr3R_18625001 RAL-426 2282 chr3R 18670069 18670091 chr3R 18670469 18670482 9 403 5.0 4.0 4.5 1.6 413 chr3R 18670069 intron CG7702 + chr3R 18670276 intron CG7702 + chr3R 18670482 intron CG7702 + chr3R_9_18670001 chr3R_18670001 RAL-426 2283 chr3R 18766758 18766808 chr3R 18766856 18766903 17 96 2.0 3.0 2.5 4.9 145 chr3R 18766758 intron CG7720 - chr3R 18766830 intron CG7720 - chr3R 18766903 intron CG7720 - chr3R_17_18765001 chr3R_18765001 RAL-426 2284 chr3R 18781677 18781712 chr3R 18781768 18781779 8 91 4.0 2.0 3.0 2.0 102 chr3R 18781677 intron CG7720 - chr3R 18781728 intron CG7720 - chr3R 18781779 intron CG7720 - chr3R_8_18780001 chr3R_18780001 RAL-426 2285 chr3R 18785857 18785898 chr3R 18785949 18785995 10 94 5.5 5.0 5.2 1.6 138 chr3R 18785857 intron CG7720 - chr3R 18785926 intron CG7720 - chr3R 18785995 intron CG7720 - chr3R_10_18785001 chr3R_18785001 RAL-426 2286 chr3R 18807310 18807331 chr3R 18807407 18807416 6 93 2.5 0.0 1.2 2.7 106 chr3R 18807310 intron CG18208 - chr3R 18807363 intron CG18208 - chr3R 18807416 intron CG18208 - chr3R_6_18805001 chr3R_18805001 RAL-426 2287 chr3R 18808489 18808507 chr3R 18808550 18808604 5 75 1.5 3.5 2.5 1.4 115 chr3R 18808489 intron CG18208 - chr3R 18808546 intron CG18208 - chr3R 18808604 intron CG18208 - chr3R_5_18805001 chr3R_18805001 RAL-426 2288 chr3R 18812061 18812108 chr3R 18812156 18812202 24 96 4.0 5.0 4.5 4.4 141 chr3R 18812061 intron CG18208 - chr3R 18812132 intron CG18208 - chr3R 18812202 intron CG18208 - chr3R_24_18810001 chr3R_18810001 RAL-426 2289 chr3R 18817493 18817538 chr3R 18817611 18817656 6 118 0.0 0.0 0.0 6.0 163 chr3R 18817493 intron CG18208 - chr3R 18817574 intron CG18208 - chr3R 18817656 intron CG18208 - chr3R_6_18815001 chr3R_18815001 RAL-426 2290 chr3R 18863162 18863179 chr3R 18863259 18863285 6 104 0.0 2.5 1.2 2.7 123 chr3R 18863162 intergenic not near genes chr3R 18863224 intergenic not near genes chr3R 18863285 intergenic not near genes chr3R_6_18860001 chr3R_18860001 RAL-426 2291 chr3R 18887583 18887598 chr3R 18887684 18887699 4 101 12.5 4.5 8.5 0.4 116 chr3R 18887583 intergenic not near genes chr3R 18887641 intergenic not near genes chr3R 18887699 intergenic not near genes chr3R_4_18885001 chr3R_18885001 RAL-426 2292 chr3R 19144390 19144431 chr3R 19144506 19144546 19 114 2.0 5.0 3.5 4.2 156 chr3R 19144390 intron Ppcs - chr3R 19144468 intron Ppcs - chr3R 19144546 intron Ppcs - chr3R_19_19140001 chr3R_19140001 RAL-426 2293 chr3R 19248855 19248887 chr3R 19248955 19248984 7 96 4.0 0.0 2.0 2.3 129 chr3R 19248855 intergenic not near genes chr3R 19248920 intergenic not near genes chr3R 19248984 intergenic not near genes chr3R_7_19245001 chr3R_19245001 RAL-426 2294 chr3R 19340375 19340429 chr3R 19340472 19340526 14 95 6.0 3.5 4.8 2.4 151 chr3R 19340375 intergenic not near genes chr3R 19340450 intergenic not near genes chr3R 19340526 intergenic not near genes chr3R_14_19340001 chr3R_19340001 RAL-426 2295 chr3R 19344659 19344698 chr3R 19344806 19344853 8 149 6.0 3.0 4.5 1.5 194 chr3R 19344659 intergenic not near genes chr3R 19344756 intergenic not near genes chr3R 19344853 intergenic not near genes chr3R_8_19340001 chr3R_19340001 RAL-426 2296 chr3R 19394406 19394454 chr3R 19395079 19395100 13 668 2.5 2.0 2.2 4.1 694 chr3R 19394406 intron,intron Ino80 -,CG3739 + chr3R 19394753 intron,exon Ino80 -,CG3739 + chr3R 19395100 intron,3` UTR Ino80 -,CG3739 + chr3R_13_19390001 chr3R_19390001 RAL-426 2297 chr3R 19516281 19516320 chr3R 19516398 19516400 6 108 9.5 5.0 7.2 0.7 119 chr3R 19516281 intron Dys + chr3R 19516340 intron Dys + chr3R 19516400 intron Dys + chr3R_6_19515001 chr3R_19515001 RAL-426 2298 chr3R 19564977 19564999 chr3R 19565076 19565098 9 99 3.0 2.0 2.5 2.6 121 chr3R 19564977 intron Dys + chr3R 19565038 intron Dys + chr3R 19565098 intron Dys + chr3R_9_19565001 chr3R_19565001 RAL-426 2299 chr3R 19570297 19570340 chr3R 19570385 19570436 18 93 5.0 3.5 4.2 3.5 139 chr3R 19570297 intron Dys + chr3R 19570366 intron Dys + chr3R 19570436 intron Dys + chr3R_18_19570001 chr3R_19570001 RAL-426 2300 chr3R 19602738 19602783 chr3R 19602835 19602865 11 96 2.0 1.0 1.5 4.4 127 chr3R 19602738 intergenic CG7333 + chr3R 19602802 intergenic CG7333 + chr3R 19602865 intergenic CG7333 + chr3R_11_19600001 chr3R_19600001 RAL-426 2301 chr3R 19681586 19681629 chr3R 19681697 19681736 10 110 5.5 5.5 5.5 1.5 150 chr3R 19681586 intron Naam + chr3R 19681661 intron Naam + chr3R 19681736 intron Naam + chr3R_10_19680001 chr3R_19680001 RAL-426 2302 chr3R 19683233 19683271 chr3R 19683405 19683424 5 167 5.5 5.5 5.5 0.8 191 chr3R 19683233 intron Naam + chr3R 19683328 intron Naam + chr3R 19683424 intron Naam + chr3R_5_19680001 chr3R_19680001 RAL-426 2303 chr3R 19735693 19735700 chr3R 19735819 19735824 4 126 5.5 4.5 5.0 0.7 131 chr3R 19735693 intron GluClalpha + chr3R 19735758 intron GluClalpha + chr3R 19735824 intron GluClalpha + chr3R_4_19735001 chr3R_19735001 RAL-426 2304 chr3R 19735701 19735739 chr3R 19735813 19735865 12 118 5.0 3.5 4.2 2.3 164 chr3R 19735701 intron GluClalpha + chr3R 19735783 intron GluClalpha + chr3R 19735865 intron GluClalpha + chr3R_12_19735001 chr3R_19735001 RAL-426 2305 chr3R 19794337 19794377 chr3R 19799010 19799053 13 4674 24.0 35.0 29.5 0.4 4716 chr3R 19794337 intron bnl - chr3R 19796695 exon bnl - chr3R 19799053 intron bnl - chr3R_13_19795001 chr3R_19795001 RAL-426 2306 chr3R 19846939 19846994 chr3R 19847119 19847172 8 171 3.5 0.0 1.8 2.9 233 chr3R 19846939 intergenic CG4662 + chr3R 19847056 intergenic CG4662 + chr3R 19847172 intergenic CG4662 + chr3R_8_19845001 chr3R_19845001 RAL-426 2307 chr3R 19908274 19908304 chr3R 19908377 19908408 5 104 0.0 3.0 1.5 2.0 134 chr3R 19908274 intron RhoGAP92B + chr3R 19908341 intron RhoGAP92B + chr3R 19908408 intron,3` UTR RhoGAP92B +,CR45048 - chr3R_5_19905001 chr3R_19905001 RAL-426 2308 chr3R 19913995 19914044 chr3R 19914108 19914153 12 112 3.5 3.5 3.5 2.7 158 chr3R 19913995 3` UTR RhoGAP92B + chr3R 19914074 3` UTR RhoGAP92B + chr3R 19914153 3` UTR RhoGAP92B + chr3R_12_19910001 chr3R_19910001 RAL-426 2309 chr3R 20060624 20060655 chr3R 20060714 20060758 14 99 6.5 5.0 5.8 2.1 134 chr3R 20060624 intergenic not near genes chr3R 20060691 intergenic not near genes chr3R 20060758 intergenic not near genes chr3R_14_20060001 chr3R_20060001 RAL-426 2310 chr3R 20066546 20066561 chr3R 20066802 20066817 8 255 3.5 6.0 4.8 1.4 271 chr3R 20066546 intergenic not near genes chr3R 20066682 intergenic not near genes chr3R 20066817 intergenic not near genes chr3R_8_20065001 chr3R_20065001 RAL-426 2311 chr3R 20109539 20109561 chr3R 20114760 20114787 copia 9 5223 0.5 8.0 4.2 1.7 5248 chr3R 20109539 intergenic not near genes chr3R 20112163 intergenic not near genes chr3R 20114787 intergenic CG10887 + chr3R_9_20110001 chr3R_20110001 RAL-426 2312 chr3R 20147506 20147554 chr3R 20147905 20147953 11 398 2.0 5.0 3.5 2.4 447 chr3R 20147506 intergenic not near genes chr3R 20147730 intergenic not near genes chr3R 20147953 intergenic not near genes chr3R_11_20145001 chr3R_20145001 RAL-426 2313 chr3R 20156675 20156711 chr3R 20165865 20165901 roo 9 9187 4.0 4.0 4.0 1.8 9226 chr3R 20156675 intergenic not near genes chr3R 20161288 intergenic not near genes chr3R 20165901 intergenic not near genes chr3R_9_20160001 chr3R_20160001 RAL-426 2314 chr3R 20179642 20179676 chr3R 20179754 20179787 8 112 2.0 0.0 1.0 4.0 145 chr3R 20179642 intergenic not near genes chr3R 20179714 intergenic not near genes chr3R 20179787 intergenic not near genes chr3R_8_20175001 chr3R_20175001 RAL-426 2315 chr3R 20188169 20188208 chr3R 20188336 20188376 8 166 2.0 3.5 2.8 2.1 207 chr3R 20188169 intergenic not near genes chr3R 20188272 intergenic not near genes chr3R 20188376 intergenic not near genes chr3R_8_20185001 chr3R_20185001 RAL-426 2316 chr3R 20205547 20205588 chr3R 20205689 20205730 5 141 2.0 2.0 2.0 1.7 183 chr3R 20205547 intron Nlg4 + chr3R 20205638 intron Nlg4 + chr3R 20205730 intron Nlg4 + chr3R_5_20205001 chr3R_20205001 RAL-426 2317 chr3R 20209805 20209817 chr3R 20209895 20209923 5 103 3.0 3.5 3.2 1.2 118 chr3R 20209805 intron Nlg4 + chr3R 20209864 intron Nlg4 + chr3R 20209923 intron Nlg4 + chr3R_5_20205001 chr3R_20205001 RAL-426 2318 chr3R 20222531 20222580 chr3R 20222767 20222786 13 233 2.0 3.0 2.5 3.7 255 chr3R 20222531 intron Nlg4 + chr3R 20222658 intron Nlg4 + chr3R 20222786 intron Nlg4 + chr3R_13_20220001 chr3R_20220001 RAL-426 2319 chr3R 20231442 20231488 chr3R 20231602 20231647 22 162 34.5 24.0 29.2 0.7 205 chr3R 20231442 intron Nlg4 + chr3R 20231544 intron Nlg4 + chr3R 20231647 intron Nlg4 + chr3R_22_20230001 chr3R_20230001 RAL-426 2320 chr3R 20245280 20245301 chr3R 20248910 20248926 F-element 4 3628 2.5 1.0 1.8 1.4 3646 chr3R 20245280 3` UTR Nlg4 + chr3R 20247103 intergenic not near genes chr3R 20248926 intergenic not near genes chr3R_4_20245001 chr3R_20245001 RAL-426 2321 chr3R 20252236 20252247 chr3R 20252332 20252345 5 98 0.5 0.0 0.2 4.2 109 chr3R 20252236 intergenic not near genes chr3R 20252290 intergenic cic + chr3R 20252345 intergenic cic + chr3R_5_20250001 chr3R_20250001 RAL-426 2322 chr3R 20256846 20256862 chr3R 20256944 20256960 6 97 0.0 9.0 4.5 1.1 114 chr3R 20256846 intron cic + chr3R 20256903 intron cic + chr3R 20256960 intron cic + chr3R_6_20255001 chr3R_20255001 RAL-426 2323 chr3R 20266495 20266545 chr3R 20272986 20273032 Burdock 16 6489 2.5 5.5 4.0 3.2 6537 chr3R 20266495 intron cic + chr3R 20269764 intron cic + chr3R 20273032 intron cic + chr3R_16_20265001 chr3R_20265001 RAL-426 2324 chr3R 20308185 20308209 chr3R 20308286 20308328 4 102 6.5 0.0 3.2 1.0 143 chr3R 20308185 intergenic not near genes chr3R 20308256 intergenic not near genes chr3R 20308328 intergenic not near genes chr3R_4_20305001 chr3R_20305001 RAL-426 2325 chr3R 20362484 20362519 chr3R 20362583 20362617 9 98 2.0 0.5 1.2 4.1 133 chr3R 20362484 intergenic not near genes chr3R 20362550 intergenic not near genes chr3R 20362617 intergenic not near genes chr3R_9_20360001 chr3R_20360001 RAL-426 2326 chr3R 20469267 20469473 chr3R 20469379 20469559 5 100 0.0 0.0 0.0 5.0 292 chr3R 20469267 intron Gfrl - chr3R 20469413 intron Gfrl - chr3R 20469559 intron Gfrl - chr3R_5_20465001 chr3R_20465001 RAL-426 2327 chr3R 20506566 20506614 chr3R 20507389 20507436 BS 12 822 5.5 2.5 4.0 2.4 870 chr3R 20506566 intergenic Or92a + chr3R 20507001 intergenic CG4288 - chr3R 20507436 3` UTR CG4288 - chr3R_12_20505001 chr3R_20505001 RAL-426 2328 chr3R 20512976 20513001 chr3R 20515708 20515733 opus 5 2731 2.0 0.0 1.0 2.5 2757 chr3R 20512976 intergenic not near genes chr3R 20514354 intergenic not near genes chr3R 20515733 intergenic not near genes chr3R_5_20510001 chr3R_20510001 RAL-426 2329 chr3R 20555488 20555525 chr3R 20555817 20555854 8 323 7.5 1.5 4.5 1.5 366 chr3R 20555488 intron att-ORFA - chr3R 20555671 intron att-ORFA - chr3R 20555854 intron att-ORFA - chr3R_8_20555001 chr3R_20555001 RAL-426 2330 chr3R 20586006 20586050 chr3R 20586104 20586148 9 95 4.5 3.5 4.0 1.8 142 chr3R 20586006 intergenic Sep2 -,CG16953 - chr3R 20586077 intergenic Sep2 -,CG16953 - chr3R 20586148 3` UTR Sep2 - chr3R_9_20585001 chr3R_20585001 RAL-426 2331 chr3R 20594464 20594512 chr3R 20594574 20594622 7 110 1.0 0.0 0.5 4.7 158 chr3R 20594464 intron bon + chr3R 20594543 intron bon + chr3R 20594622 intron bon + chr3R_7_20590001 chr3R_20590001 RAL-426 2332 chr3R 20703464 20703514 chr3R 20703878 20703928 12 410 1.5 5.0 3.2 2.9 464 chr3R 20703464 intron Oamb - chr3R 20703696 intron Oamb - chr3R 20703928 intron Oamb - chr3R_12_20700001 chr3R_20700001 RAL-426 2333 chr3R 20707726 20707774 chr3R 20707961 20708009 16 232 3.0 4.0 3.5 3.6 283 chr3R 20707726 intron Oamb - chr3R 20707868 intron Oamb - chr3R 20708009 intron Oamb - chr3R_16_20705001 chr3R_20705001 RAL-426 2334 chr3R 20716792 20716842 chr3R 20717149 20717185 16 346 5.0 4.0 4.5 2.9 393 chr3R 20716792 intergenic not near genes chr3R 20716988 intergenic not near genes chr3R 20717185 intergenic not near genes chr3R_16_20715001 chr3R_20715001 RAL-426 2335 chr3R 20730928 20730955 chr3R 20731039 20731054 7 106 3.5 0.0 1.8 2.5 126 chr3R 20730928 intergenic not near genes chr3R 20730991 intergenic not near genes chr3R 20731054 intergenic not near genes chr3R_7_20730001 chr3R_20730001 RAL-426 2336 chr3R 20733761 20733798 chr3R 20733852 20733869 10 90 5.0 6.5 5.8 1.5 108 chr3R 20733761 intergenic not near genes chr3R 20733815 intergenic not near genes chr3R 20733869 intergenic not near genes chr3R_10_20730001 chr3R_20730001 RAL-426 2337 chr3R 20764400 20764436 chr3R 20764516 20764544 5 113 9.0 5.0 7.0 0.6 144 chr3R 20764400 intron Syp + chr3R 20764472 intron Syp + chr3R 20764544 intron Syp + chr3R_5_20760001 chr3R_20760001 RAL-426 2338 chr3R 20767483 20767535 chr3R 20767597 20767633 7 111 5.5 1.5 3.5 1.6 150 chr3R 20767483 intron Syp + chr3R 20767558 intron Syp + chr3R 20767633 intron Syp + chr3R_7_20765001 chr3R_20765001 RAL-426 2339 chr3R 20771704 20771728 chr3R 20771800 20771822 9 94 0.0 6.0 3.0 2.2 118 chr3R 20771704 intron,intron Syp +,Takl1 - chr3R 20771763 intron,intron Syp +,Takl1 - chr3R 20771822 intron,exon Syp +,Takl1 - chr3R_9_20770001 chr3R_20770001 RAL-426 2340 chr3R 20787419 20787453 chr3R 20787530 20787564 5 110 4.5 3.0 3.8 1.0 145 chr3R 20787419 intron Syp + chr3R 20787492 intron Syp + chr3R 20787564 intron Syp + chr3R_5_20785001 chr3R_20785001 RAL-426 2341 chr3R 20850067 20850104 chr3R 20850172 20850208 5 99 0.5 2.0 1.2 2.3 141 chr3R 20850067 intergenic RpS30 + chr3R 20850138 intergenic RpS30 + chr3R 20850208 intergenic RpS30 + chr3R_5_20850001 chr3R_20850001 RAL-426 2342 chr3R 20870231 20870273 chr3R 20870336 20870378 10 104 2.5 4.0 3.2 2.4 147 chr3R 20870231 intergenic not near genes chr3R 20870304 intergenic not near genes chr3R 20870378 intergenic not near genes chr3R_10_20870001 chr3R_20870001 RAL-426 2343 chr3R 20901661 20901687 chr3R 20901779 20901805 5 121 2.5 11.0 6.8 0.6 144 chr3R 20901661 intergenic CG5621 + chr3R 20901733 intergenic CG5621 + chr3R 20901805 intergenic CG5621 + chr3R_5_20900001 chr3R_20900001 RAL-426 2344 chr3R 20951732 20951776 chr3R 20952099 20952144 5 368 3.0 4.5 3.8 1.0 412 chr3R 20951732 intron Atpalpha + chr3R 20951938 intron Atpalpha + chr3R 20952144 intron Atpalpha + chr3R_5_20950001 chr3R_20950001 RAL-426 2345 chr3R 21014003 21014045 chr3R 21014101 21014128 9 94 4.5 5.0 4.8 1.6 125 chr3R 21014003 3` UTR Calx + chr3R 21014066 3` UTR Calx + chr3R 21014128 3` UTR Calx + chr3R_9_21010001 chr3R_21010001 RAL-426 2346 chr3R 21074807 21074826 chr3R 21075045 21075067 5 237 2.0 8.0 5.0 0.8 260 chr3R 21074807 intron dmrt93B + chr3R 21074937 intron dmrt93B + chr3R 21075067 intron dmrt93B + chr3R_5_21070001 chr3R_21070001 RAL-426 2347 chr3R 21108022 21108042 chr3R 21108303 21108317 7 280 4.0 3.0 3.5 1.6 295 chr3R 21108022 intergenic Sec15 -,rtet + chr3R 21108170 intergenic Sec15 -,rtet + chr3R 21108317 intergenic rtet +,Sec15 - chr3R_7_21105001 chr3R_21105001 RAL-426 2348 chr3R 21108044 21108060 chr3R 21108302 21108340 4 275 3.0 3.0 3.0 1.0 296 chr3R 21108044 intergenic Sec15 -,rtet + chr3R 21108192 intergenic Sec15 -,rtet + chr3R 21108340 intergenic rtet +,Sec15 - chr3R_4_21105001 chr3R_21105001 RAL-426 2349 chr3R 21132641 21132649 chr3R 21132717 21132747 4 95 5.0 0.0 2.5 1.1 106 chr3R 21132641 3` UTR Ice2 + chr3R 21132694 3` UTR Ice2 + chr3R 21132747 3` UTR CG7009 - chr3R_4_21130001 chr3R_21130001 RAL-426 2350 chr3R 21154533 21154581 chr3R 21154758 21154816 10 232 9.5 0.0 4.8 1.7 283 chr3R 21154533 intron SNF4Agamma + chr3R 21154674 intron SNF4Agamma + chr3R 21154816 intron SNF4Agamma + chr3R_10_21150001 chr3R_21150001 RAL-426 2351 chr3R 21158753 21158784 chr3R 21158854 21158858 8 97 9.0 4.5 6.8 1.0 105 chr3R 21158753 intron SNF4Agamma + chr3R 21158806 intron SNF4Agamma + chr3R 21158858 intron SNF4Agamma + chr3R_8_21155001 chr3R_21155001 RAL-426 2352 chr3R 21165069 21165115 chr3R 21165172 21165177 16 98 1.5 3.0 2.2 5.0 108 chr3R 21165069 intron,exon SNF4Agamma +,CG5810 + chr3R 21165123 intron,3` UTR SNF4Agamma +,CG5810 + chr3R 21165177 intron,3` UTR SNF4Agamma +,Snmp1 - chr3R_16_21165001 chr3R_21165001 RAL-426 2353 chr3R 21188380 21188416 chr3R 21188467 21188506 11 98 0.5 1.5 1.0 5.5 126 chr3R 21188380 intron SNF4Agamma + chr3R 21188443 intron SNF4Agamma + chr3R 21188506 intron SNF4Agamma + chr3R_11_21185001 chr3R_21185001 RAL-426 2354 chr3R 21189680 21189708 chr3R 21189777 21189803 4 96 3.5 3.5 3.5 0.9 123 chr3R 21189680 intron SNF4Agamma + chr3R 21189742 intron SNF4Agamma + chr3R 21189803 intron SNF4Agamma + chr3R_4_21185001 chr3R_21185001 RAL-426 2355 chr3R 21330847 21330901 chr3R 21330958 21330993 22 101 4.5 3.5 4.0 4.4 146 chr3R 21330847 intron CG16791 - chr3R 21330920 intron CG16791 - chr3R 21330993 intron CG16791 - chr3R_22_21330001 chr3R_21330001 RAL-426 2356 chr3R 21343805 21343833 chr3R 21343918 21343941 5 112 5.0 3.5 4.2 1.0 136 chr3R 21343805 intron CG16791 - chr3R 21343873 intron CG16791 - chr3R 21343941 intron CG16791 - chr3R_5_21340001 chr3R_21340001 RAL-426 2357 chr3R 21383272 21383301 chr3R 21383358 21383401 4 95 0.0 1.0 0.5 2.7 129 chr3R 21383272 intergenic not near genes chr3R 21383336 intergenic not near genes chr3R 21383401 intergenic not near genes chr3R_4_21380001 chr3R_21380001 RAL-426 2358 chr3R 21385692 21385714 chr3R 21385776 21385812 5 89 1.5 0.0 0.8 2.8 120 chr3R 21385692 intergenic not near genes chr3R 21385752 intergenic not near genes chr3R 21385812 intergenic not near genes chr3R_5_21385001 chr3R_21385001 RAL-426 2359 chr3R 21472000 21472030 chr3R 21472101 21472130 9 97 5.0 6.5 5.8 1.3 130 chr3R 21472000 intergenic not near genes chr3R 21472065 intergenic not near genes chr3R 21472130 intergenic not near genes chr3R_9_21470001 chr3R_21470001 RAL-426 2360 chr3R 21494669 21494681 chr3R 21494769 21494781 4 98 10.5 4.5 7.5 0.5 112 chr3R 21494669 intergenic not near genes chr3R 21494725 intergenic not near genes chr3R 21494781 intergenic not near genes chr3R_4_21490001 chr3R_21490001 RAL-426 2361 chr3R 21494682 21494707 chr3R 21494766 21494807 11 97 5.5 4.5 5.0 1.8 125 chr3R 21494682 intergenic not near genes chr3R 21494744 intergenic not near genes chr3R 21494807 intergenic not near genes chr3R_11_21490001 chr3R_21490001 RAL-426 2362 chr3R 21518256 21518260 chr3R 21518356 21518364 4 103 0.0 3.5 1.8 1.4 108 chr3R 21518256 intergenic not near genes chr3R 21518310 intergenic not near genes chr3R 21518364 intergenic not near genes chr3R_4_21515001 chr3R_21515001 RAL-426 2363 chr3R 21518264 21518272 chr3R 21518352 21518376 4 100 0.0 3.5 1.8 1.4 112 chr3R 21518264 intergenic not near genes chr3R 21518320 intergenic not near genes chr3R 21518376 intergenic not near genes chr3R_4_21515001 chr3R_21515001 RAL-426 2364 chr3R 21519972 21520134 chr3R 21520093 21520248 19 117 0.5 0.0 0.2 15.8 276 chr3R 21519972 intergenic not near genes chr3R 21520110 intergenic not near genes chr3R 21520248 intergenic not near genes chr3R_19_21520001 chr3R_21520001 RAL-426 2365 chr3R 21600254 21600271 chr3R 21600337 21600369 5 94 0.0 11.0 5.5 0.8 115 chr3R 21600254 intron InR - chr3R 21600312 intron InR - chr3R 21600369 intron InR - chr3R_5_21600001 chr3R_21600001 RAL-426 2366 chr3R 21609008 21609037 chr3R 21611641 21611641 NOF 7 2629 4.0 5.5 4.8 1.2 2633 chr3R 21609008 intron InR - chr3R 21610324 intron InR - chr3R 21611641 intron InR - chr3R_7_21610001 chr3R_21610001 RAL-426 2367 chr3R 21624089 21624111 chr3R 21624196 21624224 12 112 4.5 5.5 5.0 2.0 135 chr3R 21624089 intron E2f - chr3R 21624156 intron E2f - chr3R 21624224 intron E2f - chr3R_12_21620001 chr3R_21620001 RAL-426 2368 chr3R 21759688 21759728 chr3R 21759791 21759822 15 106 4.5 2.5 3.5 3.3 134 chr3R 21759688 exon CG42335 + chr3R 21759755 exon CG42335 + chr3R 21759822 intron CG42335 + chr3R_15_21755001 chr3R_21755001 RAL-426 2369 chr3R 21761108 21761155 chr3R 21768513 21768563 mdg1 7 7407 4.5 8.0 6.2 1.0 7455 chr3R 21761108 exon CG42335 + chr3R 21764836 intron CG42335 + chr3R 21768563 exon CG42335 + chr3R_7_21760001 chr3R_21760001 RAL-426 2370 chr3R 21883955 21883990 chr3R 21884053 21884088 5 97 0.5 4.0 2.2 1.6 133 chr3R 21883955 intron,3` UTR,3` UTR CR45046 -,CG31465 +,fit - chr3R 21884022 intron,3` UTR CR45046 -,fit - chr3R 21884088 3` UTR,exon CR45046 -,fit - chr3R_5_21880001 chr3R_21880001 RAL-426 2371 chr3R 17389054 17389054 chr3R 21907534 21907534 11 4518480 7.0 24.0 15.5 0.7 4518480 chr3R 17389054 intron,3` UTR Brf -,lute + chr3R 19648294 5` UTR CG6195 - chr3R 21907534 intergenic CG6678 + chr3R_11_19645001 chr3R_19645001 RAL-426 2372 chr3R 21337429 21337429 chr3R 21907534 21907534 5 570105 7.0 24.0 15.5 0.3 570105 chr3R 21337429 intron CG16791 - chr3R 21622482 intron E2f - chr3R 21907534 intergenic CG6678 + chr3R_5_21620001 chr3R_21620001 RAL-426 2373 chr3R 21907534 21907534 chr3R 28831801 28831802 34 6924268 25.5 21.0 23.2 1.4 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_34_25365001 chr3R_25365001 RAL-426 2374 chr3R 17389054 17389054 chr3R 21907535 21907535 8 4518481 7.0 24.5 15.8 0.5 4518481 chr3R 17389054 intron,3` UTR Brf -,lute + chr3R 19648294 5` UTR CG6195 - chr3R 21907535 intergenic CG6678 + chr3R_8_19645001 chr3R_19645001 RAL-426 2375 chr3R 19457915 19457915 chr3R 21907535 21907535 5 2449620 12.0 24.5 18.2 0.3 2449620 chr3R 19457915 3` UTR CG31221 + chr3R 20682725 intergenic not near genes chr3R 21907535 intergenic CG6678 + chr3R_5_20680001 chr3R_20680001 RAL-426 2376 chr3R 20177845 20177845 chr3R 21907535 21907535 9 1729690 14.0 24.5 19.2 0.4 1729690 chr3R 20177845 intergenic not near genes chr3R 21042690 intergenic Dhc93AB - chr3R 21907535 intergenic CG6678 + chr3R_9_21040001 chr3R_21040001 RAL-426 2377 chr3R 21907535 21907535 chr3R 28831801 28831803 39 6924267 25.5 21.0 23.2 1.6 6924268 chr3R 21907535 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831803 intron WASp - chr3R_39_25365001 chr3R_25365001 RAL-426 2378 chr3R 17389054 17389054 chr3R 21907536 21907536 5 4518482 7.0 24.5 15.8 0.3 4518482 chr3R 17389054 intron,3` UTR Brf -,lute + chr3R 19648295 5` UTR CG6195 - chr3R 21907536 intergenic CG6678 + chr3R_5_19645001 chr3R_19645001 RAL-426 2379 chr3R 21907536 21907536 chr3R 26659332 26659337 5 4751798 26.0 23.5 24.8 0.2 4751801 chr3R 21907536 intergenic CG6678 + chr3R 24283436 intergenic CR45662 - chr3R 26659337 intron beat-VII - chr3R_5_24280001 chr3R_24280001 RAL-426 2380 chr3R 21907536 21907536 chr3R 28831801 28831818 60 6924266 26.0 21.0 23.5 2.4 6924282 chr3R 21907536 intergenic CG6678 + chr3R 25369677 intron Fur1 - chr3R 28831818 5` UTR WASp - chr3R_60_25365001 chr3R_25365001 RAL-426 2381 chr3R 21907536 21907536 chr3R 29013339 29013340 7 7105804 26.0 18.0 22.0 0.3 7105804 chr3R 21907536 intergenic CG6678 + chr3R 25460438 intron Fur1 - chr3R 29013340 intron wat - chr3R_7_25460001 chr3R_25460001 RAL-426 2382 chr3R 21983121 21983142 chr3R 21983222 21983229 7 95 5.0 2.5 3.8 1.5 108 chr3R 21983121 intron Eip93F + chr3R 21983175 intron Eip93F + chr3R 21983229 intron Eip93F + chr3R_7_21980001 chr3R_21980001 RAL-426 2383 chr3R 22025879 22025890 chr3R 22025971 22025995 7 104 0.0 8.5 4.2 1.3 116 chr3R 22025879 intergenic Cchl -,CG6028 - chr3R 22025937 intergenic Cchl -,CG6028 - chr3R 22025995 3` UTR Cchl - chr3R_7_22025001 chr3R_22025001 RAL-426 2384 chr3R 22055558 22055579 chr3R 22055765 22055778 10 206 1.5 8.5 5.0 1.7 220 chr3R 22055558 intron how + chr3R 22055668 intron how + chr3R 22055778 intron how + chr3R_10_22055001 chr3R_22055001 RAL-426 2385 chr3R 22239477 22239517 chr3R 22248556 22248582 roo 5 9069 7.5 0.5 4.0 1.0 9105 chr3R 22239477 intron SKIP + chr3R 22244030 intron SKIP + chr3R 22248582 intron SKIP + chr3R_5_22240001 chr3R_22240001 RAL-426 2386 chr3R 22266996 22267045 chr3R 22268110 22268160 16 1109 1.5 5.5 3.5 3.6 1164 chr3R 22266996 intron SKIP + chr3R 22267578 intron SKIP + chr3R 22268160 intron SKIP + chr3R_16_22265001 chr3R_22265001 RAL-426 2387 chr3R 22280913 22280957 chr3R 22281015 22281059 9 99 4.0 2.5 3.2 2.1 146 chr3R 22280913 intron SKIP + chr3R 22280986 intron SKIP + chr3R 22281059 intron SKIP + chr3R_9_22280001 chr3R_22280001 RAL-426 2388 chr3R 22313325 22313374 chr3R 22313425 22313458 9 97 1.5 2.0 1.8 3.2 133 chr3R 22313325 intron CG34377 - chr3R 22313392 intron CG34377 - chr3R 22313458 intron CG34377 - chr3R_9_22310001 chr3R_22310001 RAL-426 2389 chr3R 22318958 22318969 chr3R 22319053 22319065 4 95 4.5 5.5 5.0 0.7 107 chr3R 22318958 5` UTR CG34377 - chr3R 22319012 intron CG34377 - chr3R 22319065 intron CG34377 - chr3R_4_22315001 chr3R_22315001 RAL-426 2390 chr3R 22318971 22319000 chr3R 22319048 22319055 6 76 2.5 4.0 3.2 1.4 84 chr3R 22318971 5` UTR CG34377 - chr3R 22319013 intron CG34377 - chr3R 22319055 intron CG34377 - chr3R_6_22315001 chr3R_22315001 RAL-426 2391 chr3R 22347874 22347904 chr3R 22347970 22348002 4 98 2.0 6.0 4.0 0.8 128 chr3R 22347874 intergenic not near genes chr3R 22347938 intergenic not near genes chr3R 22348002 intergenic not near genes chr3R_4_22345001 chr3R_22345001 RAL-426 2392 chr3R 22437775 22437822 chr3R 22437885 22437909 16 107 0.5 2.0 1.2 7.3 134 chr3R 22437775 intergenic not near genes chr3R 22437842 intergenic not near genes chr3R 22437909 intergenic not near genes chr3R_16_22435001 chr3R_22435001 RAL-426 2393 chr3R 22450536 22450563 chr3R 22453187 22453223 NOF 8 2654 4.0 7.5 5.8 1.2 2687 chr3R 22450536 intron CG34376 + chr3R 22451880 intron CG34376 + chr3R 22453223 intron CG34376 + chr3R_8_22450001 chr3R_22450001 RAL-426 2394 chr3R 22538457 22538473 chr3R 22538543 22538578 6 102 1.0 8.0 4.5 1.1 121 chr3R 22538457 intron CG5326 - chr3R 22538518 intron CG5326 - chr3R 22538578 intron CG5326 - chr3R_6_22535001 chr3R_22535001 RAL-426 2395 chr3R 22591643 22591697 chr3R 22591743 22591797 13 99 4.0 3.0 3.5 2.9 154 chr3R 22591643 intron Efa6 + chr3R 22591720 intron Efa6 + chr3R 22591797 intron Efa6 + chr3R_13_22590001 chr3R_22590001 RAL-426 2396 chr3R 22646916 22646946 chr3R 22647012 22647028 6 102 4.5 0.0 2.2 1.9 112 chr3R 22646916 intron wake + chr3R 22646972 intron wake + chr3R 22647028 intron wake + chr3R_6_22645001 chr3R_22645001 RAL-426 2397 chr3R 22684185 22684240 chr3R 22684281 22684325 10 93 5.5 4.5 5.0 1.7 140 chr3R 22684185 intergenic not near genes chr3R 22684255 intergenic not near genes chr3R 22684325 intergenic not near genes chr3R_10_22680001 chr3R_22680001 RAL-426 2398 chr3R 22769076 22769114 chr3R 22769173 22769210 7 92 5.0 8.5 6.8 0.9 134 chr3R 22769076 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769143 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769210 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_7_22765001 chr3R_22765001 RAL-426 2399 chr3R 22769118 22769122 chr3R 22769172 22769176 4 75 4.0 8.5 6.2 0.6 58 chr3R 22769118 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769147 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769176 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_4_22765001 chr3R_22765001 RAL-426 2400 chr3R 22794494 22794502 chr3R 22794588 22794599 6 95 10.0 7.5 8.8 0.6 105 chr3R 22794494 intergenic CG7029 + chr3R 22794546 intergenic not near genes chr3R 22794599 intergenic not near genes chr3R_6_22790001 chr3R_22790001 RAL-426 2401 chr3R 22794506 22794539 chr3R 22794583 22794636 10 90 4.5 6.0 5.2 1.6 130 chr3R 22794506 intergenic CG7029 + chr3R 22794571 intergenic not near genes chr3R 22794636 intergenic not near genes chr3R_10_22790001 chr3R_22790001 RAL-426 2402 chr3R 22803425 22803470 chr3R 22803632 22803681 15 208 3.0 4.0 3.5 3.3 256 chr3R 22803425 intergenic not near genes chr3R 22803553 intergenic not near genes chr3R 22803681 intergenic not near genes chr3R_15_22800001 chr3R_22800001 RAL-426 2403 chr3R 22840820 22840836 chr3R 22841285 22841317 10 477 4.0 7.0 5.5 1.5 497 chr3R 22840820 intergenic not near genes chr3R 22841068 intergenic not near genes chr3R 22841317 intergenic not near genes chr3R_10_22840001 chr3R_22840001 RAL-426 2404 chr3R 22840841 22840846 chr3R 22841276 22841316 4 457 3.0 4.5 3.8 0.8 475 chr3R 22840841 intergenic not near genes chr3R 22841078 intergenic not near genes chr3R 22841316 intergenic not near genes chr3R_4_22840001 chr3R_22840001 RAL-426 2405 chr3R 22888993 22889046 chr3R 22889090 22889143 18 93 7.5 5.5 6.5 2.4 150 chr3R 22888993 intergenic not near genes chr3R 22889068 intergenic not near genes chr3R 22889143 intergenic not near genes chr3R_18_22885001 chr3R_22885001 RAL-426 2406 chr3R 22891104 22891139 chr3R 22891208 22891227 8 99 7.0 2.5 4.8 1.4 123 chr3R 22891104 intergenic not near genes chr3R 22891166 intergenic not near genes chr3R 22891227 intergenic not near genes chr3R_8_22890001 chr3R_22890001 RAL-426 2407 chr3R 22891140 22891159 chr3R 22891207 22891231 6 82 3.0 2.5 2.8 1.6 91 chr3R 22891140 intergenic not near genes chr3R 22891186 intergenic not near genes chr3R 22891231 intergenic not near genes chr3R_6_22890001 chr3R_22890001 RAL-426 2408 chr3R 22927678 22927721 chr3R 22927777 22927808 10 94 5.5 4.5 5.0 1.7 130 chr3R 22927678 intron klg + chr3R 22927743 intron klg + chr3R 22927808 intron klg + chr3R_10_22925001 chr3R_22925001 RAL-426 2409 chr3R 22938250 22938296 chr3R 22938430 22938455 17 175 4.5 6.0 5.2 2.7 205 chr3R 22938250 intron klg + chr3R 22938352 intron klg + chr3R 22938455 intron klg + chr3R_17_22935001 chr3R_22935001 RAL-426 2410 chr3R 23057839 23057848 chr3R 23057941 23057945 5 102 4.5 0.0 2.2 1.6 106 chr3R 23057839 intron CG17119 - chr3R 23057892 intron CG17119 - chr3R 23057945 intron CG17119 - chr3R_5_23055001 chr3R_23055001 RAL-426 2411 chr3R 23060254 23060259 chr3R 23060335 23060365 4 100 0.0 2.0 1.0 2.0 111 chr3R 23060254 intron sav - chr3R 23060310 intron sav - chr3R 23060365 intron sav - chr3R_4_23060001 chr3R_23060001 RAL-426 2412 chr3R 23242276 23242325 chr3R 23242375 23242382 6 86 3.5 4.5 4.0 1.2 106 chr3R 23242276 intron CG4467 - chr3R 23242329 intron CG4467 - chr3R 23242382 intron CG4467 - chr3R_6_23240001 chr3R_23240001 RAL-426 2413 chr3R 23363660 23363705 chr3R 23363766 23363811 15 106 8.0 6.0 7.0 1.9 151 chr3R 23363660 intergenic CG4408 - chr3R 23363736 intergenic CG4408 - chr3R 23363811 intergenic CG4408 - chr3R_15_23360001 chr3R_23360001 RAL-426 2414 chr3R 23543286 23543336 chr3R 23543383 23543433 12 94 2.0 2.5 2.2 3.8 147 chr3R 23543286 intergenic not near genes chr3R 23543360 intergenic not near genes chr3R 23543433 intergenic not near genes chr3R_12_23540001 chr3R_23540001 RAL-426 2415 chr3R 23549148 23549179 chr3R 23549253 23549295 6 110 1.0 2.5 1.8 2.1 147 chr3R 23549148 intergenic not near genes chr3R 23549222 intergenic not near genes chr3R 23549295 intergenic not near genes chr3R_6_23545001 chr3R_23545001 RAL-426 2416 chr3R 23558379 23558427 chr3R 23560180 23560228 Bari1 13 1795 3.0 5.0 4.0 2.6 1849 chr3R 23558379 intron beat-IV + chr3R 23559304 intron beat-IV + chr3R 23560228 intron beat-IV + chr3R_13_23555001 chr3R_23555001 RAL-426 2417 chr3R 23562106 23562147 chr3R 23562216 23562267 9 106 6.0 3.5 4.8 1.6 161 chr3R 23562106 intron beat-IV + chr3R 23562186 intron beat-IV + chr3R 23562267 intron beat-IV + chr3R_9_23560001 chr3R_23560001 RAL-426 2418 chr3R 23565841 23565858 chr3R 23565944 23565964 7 106 0.0 0.0 0.0 7.0 123 chr3R 23565841 intron beat-IV + chr3R 23565902 intron beat-IV + chr3R 23565964 intron beat-IV + chr3R_7_23565001 chr3R_23565001 RAL-426 2419 chr3R 23650249 23650276 chr3R 23650371 23650407 6 129 1.5 0.0 0.8 3.3 158 chr3R 23650249 intron CG31145 - chr3R 23650328 intron CG31145 - chr3R 23650407 intron CG31145 - chr3R_6_23650001 chr3R_23650001 RAL-426 2420 chr3R 23662837 23662869 chr3R 23662977 23663000 12 142 3.0 4.0 3.5 2.7 163 chr3R 23662837 intron CG31145 - chr3R 23662918 intron CG31145 - chr3R 23663000 intron CG31145 - chr3R_12_23660001 chr3R_23660001 RAL-426 2421 chr3R 23684720 23684730 chr3R 23685192 23685205 roo 4 478 1.0 7.0 4.0 0.8 485 chr3R 23684720 intron CG18754 + chr3R 23684962 intron CG18754 + chr3R 23685205 exon CG18754 + chr3R_4_23680001 chr3R_23680001 RAL-426 2422 chr3R 23688464 23688471 chr3R 23688573 23688581 5 110 8.0 12.5 10.2 0.4 117 chr3R 23688464 intergenic SPE + chr3R 23688522 intergenic SPE +,CG10254 - chr3R 23688581 intergenic CG10254 -,SPE + chr3R_5_23685001 chr3R_23685001 RAL-426 2423 chr3R 23739913 23739933 chr3R 23739991 23740030 6 88 5.5 4.5 5.0 1.0 117 chr3R 23739913 intron Hmgcr + chr3R 23739972 intron Hmgcr + chr3R 23740030 intron Hmgcr + chr3R_6_23735001 chr3R_23735001 RAL-426 2424 chr3R 23820620 23820658 chr3R 23820725 23820763 7 106 2.0 1.5 1.8 2.5 143 chr3R 23820620 5` UTR CG34355 + chr3R 23820692 5` UTR CG34355 + chr3R 23820763 5` UTR CG34355 + chr3R_7_23820001 chr3R_23820001 RAL-426 2425 chr3R 23835389 23835424 chr3R 23844556 23844592 roo 13 9169 5.5 3.0 4.2 2.5 9203 chr3R 23835389 intron CG34355 + chr3R 23839990 intron CG34355 + chr3R 23844592 intron CG34355 + chr3R_13_23835001 chr3R_23835001 RAL-426 2426 chr3R 23851071 23851089 chr3R 23858755 23858775 opus 8 7686 3.0 8.0 5.5 1.2 7704 chr3R 23851071 3` UTR CG34355 + chr3R 23854923 intergenic not near genes chr3R 23858775 intergenic not near genes chr3R_8_23850001 chr3R_23850001 RAL-426 2427 chr3R 23888067 23888113 chr3R 23888173 23888219 7 105 3.5 1.5 2.5 2.0 152 chr3R 23888067 intron Pli - chr3R 23888143 intron Pli - chr3R 23888219 intron Pli - chr3R_7_23885001 chr3R_23885001 RAL-426 2428 chr3R 23893795 23893813 chr3R 23893888 23893903 5 110 0.5 3.5 2.0 1.7 108 chr3R 23893795 intergenic sba -,tbrd-1 - chr3R 23893849 intergenic sba -,tbrd-1 - chr3R 23893903 intergenic sba - chr3R_5_23890001 chr3R_23890001 RAL-426 2429 chr3R 23944891 23944936 chr3R 23944996 23945018 20 101 2.5 2.0 2.2 6.2 127 chr3R 23944891 intron CG12268 - chr3R 23944954 intron CG12268 - chr3R 23945018 exon CG12268 - chr3R_20_23940001 chr3R_23940001 RAL-426 2430 chr3R 23949021 23949068 chr3R 23949117 23949165 14 95 4.0 1.0 2.5 4.0 144 chr3R 23949021 intergenic not near genes chr3R 23949093 intergenic not near genes chr3R 23949165 intergenic not near genes chr3R_14_23945001 chr3R_23945001 RAL-426 2431 chr3R 23967544 23967581 chr3R 23967632 23967660 15 90 2.5 5.5 4.0 3.0 116 chr3R 23967544 intron CG31140 + chr3R 23967602 intron CG31140 + chr3R 23967660 intron CG31140 + chr3R_15_23965001 chr3R_23965001 RAL-426 2432 chr3R 24014056 24014075 chr3R 24014294 24014308 5 237 4.5 5.5 5.0 0.8 252 chr3R 24014056 intron KrT95D - chr3R 24014182 intron KrT95D - chr3R 24014308 intron KrT95D - chr3R_5_24010001 chr3R_24010001 RAL-426 2433 chr3R 24014076 24014087 chr3R 24014293 24014325 4 231 2.5 5.5 4.0 0.8 249 chr3R 24014076 intron KrT95D - chr3R 24014200 intron KrT95D - chr3R 24014325 intron KrT95D - chr3R_4_24010001 chr3R_24010001 RAL-426 2434 chr3R 24072070 24072123 chr3R 24072524 24072579 jockey 11 445 4.5 0.0 2.2 3.4 509 chr3R 24072070 intron 4EHP - chr3R 24072324 intron 4EHP - chr3R 24072579 intron 4EHP - chr3R_11_24070001 chr3R_24070001 RAL-426 2435 chr3R 24076904 24076918 chr3R 24078391 24078397 hobo 5 1485 10.0 7.5 8.8 0.5 1493 chr3R 24076904 intron 4EHP - chr3R 24077650 intron 4EHP - chr3R 24078397 intron 4EHP - chr3R_5_24075001 chr3R_24075001 RAL-426 2436 chr3R 24207215 24207236 chr3R 24212288 24212332 flea 7 5090 9.0 10.5 9.8 0.6 5117 chr3R 24207215 intron twin - chr3R 24209774 intron twin - chr3R 24212332 intron twin - chr3R_7_24205001 chr3R_24205001 RAL-426 2437 chr3R 24425838 24425885 chr3R 24426055 24426091 6 211 3.0 3.5 3.2 1.4 253 chr3R 24425838 intron nAChRalpha1 - chr3R 24425964 intron nAChRalpha1 - chr3R 24426091 intron nAChRalpha1 - chr3R_6_24425001 chr3R_24425001 RAL-426 2438 chr3R 24426454 24426486 chr3R 24426770 24426813 8 325 4.0 7.0 5.5 1.2 359 chr3R 24426454 intron nAChRalpha1 - chr3R 24426634 intron nAChRalpha1 - chr3R 24426813 intron nAChRalpha1 - chr3R_8_24425001 chr3R_24425001 RAL-426 2439 chr3R 24431592 24431622 chr3R 24431684 24431721 8 98 7.0 0.0 3.5 1.8 129 chr3R 24431592 intron nAChRalpha1 - chr3R 24431656 intron nAChRalpha1 - chr3R 24431721 intron nAChRalpha1 - chr3R_8_24430001 chr3R_24430001 RAL-426 2440 chr3R 24434223 24434268 chr3R 24434320 24434366 19 93 3.0 4.5 3.8 4.0 143 chr3R 24434223 intron nAChRalpha1 - chr3R 24434294 intron nAChRalpha1 - chr3R 24434366 intron nAChRalpha1 - chr3R_19_24430001 chr3R_24430001 RAL-426 2441 chr3R 24493045 24493063 chr3R 24493151 24493169 5 103 8.5 4.0 6.2 0.7 124 chr3R 24493045 intergenic not near genes chr3R 24493107 intergenic not near genes chr3R 24493169 intergenic not near genes chr3R_5_24490001 chr3R_24490001 RAL-426 2442 chr3R 24493291 24493305 chr3R 24493529 24493553 BS 5 246 3.5 8.0 5.8 0.7 262 chr3R 24493291 intergenic not near genes chr3R 24493422 intergenic not near genes chr3R 24493553 intergenic not near genes chr3R_5_24490001 chr3R_24490001 RAL-426 2443 chr3R 24527795 24527836 chr3R 24527906 24527947 10 110 0.5 5.0 2.8 2.6 152 chr3R 24527795 intergenic CG6607 +,CG13618 + chr3R 24527871 intergenic CG6607 +,CG13618 + chr3R 24527947 intergenic CG6607 +,CG13618 + chr3R_10_24525001 chr3R_24525001 RAL-426 2444 chr3R 24572090 24572136 chr3R 24572203 24572250 12 113 6.5 5.5 6.0 1.7 160 chr3R 24572090 intron CG13624 - chr3R 24572170 intron CG13624 - chr3R 24572250 intron CG13624 - chr3R_12_24570001 chr3R_24570001 RAL-426 2445 chr3R 24594658 24594668 chr3R 24594918 24594928 pogo 5 259 3.5 6.5 5.0 0.8 270 chr3R 24594658 intron mld + chr3R 24594793 intron mld + chr3R 24594928 intron mld + chr3R_5_24590001 chr3R_24590001 RAL-426 2446 chr3R 24624366 24624380 chr3R 24624474 24624488 7 108 1.5 7.5 4.5 1.3 122 chr3R 24624366 intron Syx18 - chr3R 24624427 intron Syx18 - chr3R 24624488 exon Syx18 - chr3R_7_24620001 chr3R_24620001 RAL-426 2447 chr3R 24635628 24635679 chr3R 24635734 24635758 15 101 4.5 4.0 4.2 2.9 130 chr3R 24635628 3` UTR puf - chr3R 24635693 3` UTR puf - chr3R 24635758 3` UTR puf - chr3R_15_24635001 chr3R_24635001 RAL-426 2448 chr3R 24730082 24730115 chr3R 24732477 24732501 Doc 6 2394 4.5 0.5 2.5 1.7 2419 chr3R 24730082 intron tok + chr3R 24731292 intron tok + chr3R 24732501 intron tok + chr3R_6_24730001 chr3R_24730001 RAL-426 2449 chr3R 24739887 24739937 chr3R 24740019 24740031 15 126 9.0 4.5 6.8 1.9 144 chr3R 24739887 intron tok + chr3R 24739959 intron tok + chr3R 24740031 intron tok + chr3R_15_24735001 chr3R_24735001 RAL-426 2450 chr3R 24743022 24743060 chr3R 24743127 24743165 6 105 4.0 4.0 4.0 1.2 143 chr3R 24743022 intron tok + chr3R 24743094 intron tok + chr3R 24743165 exon tok + chr3R_6_24740001 chr3R_24740001 RAL-426 2451 chr3R 24792002 24792040 chr3R 24792103 24792115 14 97 0.0 3.0 1.5 5.6 113 chr3R 24792002 intron Ets96B + chr3R 24792058 intron Ets96B + chr3R 24792115 intron Ets96B + chr3R_14_24790001 chr3R_24790001 RAL-426 2452 chr3R 24834248 24834298 chr3R 24834348 24834398 6 97 2.5 4.0 3.2 1.4 150 chr3R 24834248 intron sosie + chr3R 24834323 5` UTR sosie + chr3R 24834398 intron sosie + chr3R_6_24830001 chr3R_24830001 RAL-426 2453 chr3R 24854867 24854913 chr3R 24854969 24855015 5 102 1.5 4.0 2.8 1.3 148 chr3R 24854867 3` UTR,3` UTR nct +,HdacX - chr3R 24854941 3` UTR HdacX - chr3R 24855015 3` UTR HdacX - chr3R_5_24850001 chr3R_24850001 RAL-426 2454 chr3R 24893446 24893491 chr3R 24893545 24893591 15 98 2.5 1.0 1.8 5.4 145 chr3R 24893446 intron CG31121 - chr3R 24893518 intron CG31121 - chr3R 24893591 intron CG31121 - chr3R_15_24890001 chr3R_24890001 RAL-426 2455 chr3R 24927109 24927149 chr3R 24931920 24931960 Doc 15 4807 3.5 3.5 3.5 3.3 4851 chr3R 24927109 intergenic Trf4-2 + chr3R 24929534 intergenic not near genes chr3R 24931960 intergenic CG11771 + chr3R_15_24925001 chr3R_24925001 RAL-426 2456 chr3R 25004893 25004909 chr3R 25004982 25005012 7 98 10.5 4.5 7.5 0.8 119 chr3R 25004893 intron tnc + chr3R 25004952 intron tnc + chr3R 25005012 intron tnc + chr3R_7_25000001 chr3R_25000001 RAL-426 2457 chr3R 25072741 25072754 chr3R 25072853 25072866 7 112 10.0 3.0 6.5 0.9 125 chr3R 25072741 3` UTR CG9996 - chr3R 25072804 3` UTR CG9996 - chr3R 25072866 3` UTR CG9996 - chr3R_7_25070001 chr3R_25070001 RAL-426 2458 chr3R 25072761 25072785 chr3R 25072850 25072895 9 107 4.0 3.0 3.5 2.0 134 chr3R 25072761 3` UTR CG9996 - chr3R 25072828 3` UTR CG9996 - chr3R 25072895 exon CG9996 - chr3R_9_25070001 chr3R_25070001 RAL-426 2459 chr3R 25166356 25166395 chr3R 25166451 25166490 5 94 3.5 5.0 4.2 1.0 134 chr3R 25166356 intergenic not near genes chr3R 25166423 intergenic not near genes chr3R 25166490 intergenic not near genes chr3R_5_25165001 chr3R_25165001 RAL-426 2460 chr3R 25300659 25300703 chr3R 25300795 25300858 10 145 2.5 0.0 1.2 4.5 199 chr3R 25300659 intergenic CG13659 + chr3R 25300758 intergenic CG13659 + chr3R 25300858 intergenic CG13659 + chr3R_10_25300001 chr3R_25300001 RAL-426 2461 chr3R 25305140 25305186 chr3R 25305258 25305310 6 114 2.5 2.0 2.2 1.9 170 chr3R 25305140 exon CG31436 + chr3R 25305225 exon CG31436 + chr3R 25305310 exon CG31436 + chr3R_6_25305001 chr3R_25305001 RAL-426 2462 chr3R 25352887 25352915 chr3R 25352976 25353017 5 91 1.5 5.0 3.2 1.2 130 chr3R 25352887 intron Fur1 - chr3R 25352952 intron Fur1 - chr3R 25353017 intron Fur1 - chr3R_5_25350001 chr3R_25350001 RAL-426 2463 chr3R 25461387 25461432 chr3R 25461998 25462046 14 611 4.0 6.5 5.2 2.3 659 chr3R 25461387 intron Fur1 - chr3R 25461716 intron Fur1 - chr3R 25462046 intron Fur1 - chr3R_14_25460001 chr3R_25460001 RAL-426 2464 chr3R 25464470 25464525 chr3R 25464807 25464834 11 330 2.5 5.0 3.8 2.3 364 chr3R 25464470 intron Fur1 - chr3R 25464652 intron Fur1 - chr3R 25464834 intron Fur1 - chr3R_11_25460001 chr3R_25460001 RAL-426 2465 chr3R 25520985 25520991 chr3R 25521084 25521110 5 115 6.5 6.5 6.5 0.7 125 chr3R 25520985 intron msi + chr3R 25521048 intron msi + chr3R 25521110 intron msi + chr3R_5_25520001 chr3R_25520001 RAL-426 2466 chr3R 25529248 25529262 chr3R 25529448 25529460 4 199 6.5 1.0 3.8 0.8 212 chr3R 25529248 intron msi + chr3R 25529354 intron msi + chr3R 25529460 intron msi + chr3R_4_25525001 chr3R_25525001 RAL-426 2467 chr3R 7773344 7773344 chr3R 25538124 25538124 6 17764780 18.5 11.0 14.8 0.4 17764780 chr3R 7773344 intergenic not near genes chr3R 16655734 intergenic modSP - chr3R 25538124 intron msi + chr3R_6_16655001 chr3R_16655001 RAL-426 2468 chr3R 25615605 25615631 chr3R 25615695 25615736 5 97 1.5 3.5 2.5 1.4 131 chr3R 25615605 intron Npl4 - chr3R 25615670 intron Npl4 - chr3R 25615736 intron Npl4 - chr3R_5_25615001 chr3R_25615001 RAL-426 2469 chr3R 25652303 25652341 chr3R 25652398 25652438 11 96 5.5 5.5 5.5 1.7 135 chr3R 25652303 intergenic not near genes chr3R 25652370 intergenic not near genes chr3R 25652438 intergenic not near genes chr3R_11_25650001 chr3R_25650001 RAL-426 2470 chr3R 25689109 25689164 chr3R 25689237 25689292 18 123 4.5 5.0 4.8 3.1 183 chr3R 25689109 intergenic not near genes chr3R 25689200 intergenic not near genes chr3R 25689292 intergenic not near genes chr3R_18_25685001 chr3R_25685001 RAL-426 2471 chr3R 25725807 25725854 chr3R 25734987 25735034 roo 11 9175 6.0 4.5 5.2 1.8 9227 chr3R 25725807 intron LpR2 - chr3R 25730420 intron LpR2 - chr3R 25735034 intron LpR2 - chr3R_11_25730001 chr3R_25730001 RAL-426 2472 chr3R 25832674 25832721 chr3R 25841876 25841922 roo 10 9194 3.5 6.0 4.8 1.7 9248 chr3R 25832674 exon alpha4GT2 + chr3R 25837298 intron alpha4GT2 + chr3R 25841922 exon alpha4GT2 + chr3R_10_25835001 chr3R_25835001 RAL-426 2473 chr3R 25843628 25843659 chr3R 25843778 25843806 7 149 0.5 7.5 4.0 1.4 178 chr3R 25843628 intergenic CR45653 + chr3R 25843717 intergenic CR45653 + chr3R 25843806 intergenic CR45653 + chr3R_7_25840001 chr3R_25840001 RAL-426 2474 chr3R 25857129 25857165 chr3R 25857225 25857260 11 93 4.5 4.5 4.5 2.0 131 chr3R 25857129 intron CG5890 + chr3R 25857194 intron CG5890 + chr3R 25857260 intron CG5890 + chr3R_11_25855001 chr3R_25855001 RAL-426 2475 chr3R 25869192 25869241 chr3R 25869406 25869455 15 210 4.0 5.0 4.5 2.7 263 chr3R 25869192 intron CG5890 + chr3R 25869324 intron CG5890 + chr3R 25869455 intron CG5890 + chr3R_15_25865001 chr3R_25865001 RAL-426 2476 chr3R 25938166 25938199 chr3R 25938400 25938434 10 230 2.5 2.0 2.2 3.1 268 chr3R 25938166 intron CCAP-R - chr3R 25938300 intron CCAP-R - chr3R 25938434 intron CCAP-R - chr3R_10_25935001 chr3R_25935001 RAL-426 2477 chr3R 26063176 26063225 chr3R 26063290 26063339 12 114 4.0 0.5 2.2 3.8 163 chr3R 26063176 intergenic CG14551 - chr3R 26063258 intergenic CG14551 - chr3R 26063339 intergenic CG14551 - chr3R_12_26060001 chr3R_26060001 RAL-426 2478 chr3R 26122453 26122475 chr3R 26122545 26122569 8 94 0.0 8.0 4.0 1.6 116 chr3R 26122453 intron CG31324 + chr3R 26122511 intron CG31324 + chr3R 26122569 intron CG31324 + chr3R_8_26120001 chr3R_26120001 RAL-426 2479 chr3R 26140494 26140546 chr3R 26140627 26140648 10 123 4.5 3.0 3.8 2.1 154 chr3R 26140494 intergenic not near genes chr3R 26140571 intergenic not near genes chr3R 26140648 intergenic not near genes chr3R_10_26140001 chr3R_26140001 RAL-426 2480 chr3R 26144445 26144481 chr3R 26144525 26144564 10 90 1.0 2.0 1.5 4.0 119 chr3R 26144445 intergenic not near genes chr3R 26144504 intergenic not near genes chr3R 26144564 intergenic not near genes chr3R_10_26140001 chr3R_26140001 RAL-426 2481 chr3R 26204003 26204012 chr3R 26204085 26204115 6 94 5.0 3.0 4.0 1.2 112 chr3R 26204003 intron CR44320 + chr3R 26204059 intron CR44320 + chr3R 26204115 intron CR44320 + chr3R_6_26200001 chr3R_26200001 RAL-426 2482 chr3R 26204013 26204026 chr3R 26204079 26204116 8 85 4.0 2.0 3.0 2.0 103 chr3R 26204013 intron CR44320 + chr3R 26204064 intron CR44320 + chr3R 26204116 intron CR44320 + chr3R_8_26200001 chr3R_26200001 RAL-426 2483 chr3R 26207949 26207995 chr3R 26208053 26208084 11 99 4.5 2.5 3.5 2.4 135 chr3R 26207949 intron CR44320 + chr3R 26208016 intron CR44320 + chr3R 26208084 intron CR44320 + chr3R_11_26205001 chr3R_26205001 RAL-426 2484 chr3R 26226821 26226876 chr3R 26226921 26226946 18 91 2.5 5.5 4.0 3.6 125 chr3R 26226821 intergenic not near genes chr3R 26226884 intergenic not near genes chr3R 26226946 intergenic not near genes chr3R_18_26225001 chr3R_26225001 RAL-426 2485 chr3R 26239820 26239855 chr3R 26240141 26240177 10 328 4.0 2.5 3.2 2.4 357 chr3R 26239820 intron CR42745 + chr3R 26239998 intron CR42745 + chr3R 26240177 intron CR42745 + chr3R_10_26235001 chr3R_26235001 RAL-426 2486 chr3R 26294709 26294744 chr3R 26294807 26294842 12 97 4.0 5.0 4.5 2.2 133 chr3R 26294709 intergenic not near genes chr3R 26294776 intergenic not near genes chr3R 26294842 intergenic not near genes chr3R_12_26290001 chr3R_26290001 RAL-426 2487 chr3R 26365089 26365144 chr3R 26365194 26365233 9 99 1.0 3.5 2.2 2.8 144 chr3R 26365089 intergenic not near genes chr3R 26365161 intergenic not near genes chr3R 26365233 intergenic not near genes chr3R_9_26365001 chr3R_26365001 RAL-426 2488 chr3R 26370325 26370353 chr3R 26370429 26370456 7 105 0.5 2.5 1.5 2.8 131 chr3R 26370325 intergenic not near genes chr3R 26370390 intergenic not near genes chr3R 26370456 intergenic not near genes chr3R_7_26370001 chr3R_26370001 RAL-426 2489 chr3R 26376305 26376355 chr3R 26385484 26385526 roo 16 9174 4.0 0.5 2.2 5.0 9221 chr3R 26376305 intergenic not near genes chr3R 26380916 intergenic not near genes chr3R 26385526 intergenic not near genes chr3R_16_26380001 chr3R_26380001 RAL-426 2490 chr3R 26464942 26464992 chr3R 26465042 26465063 19 99 4.5 5.0 4.8 3.3 121 chr3R 26464942 intron CG5455 + chr3R 26465002 intron CG5455 + chr3R 26465063 intron CG5455 + chr3R_19_26465001 chr3R_26465001 RAL-426 2491 chr3R 26510481 26510532 chr3R 26519562 26519613 roo 21 9079 2.5 4.0 3.2 5.0 9132 chr3R 26510481 intron plum - chr3R 26515047 intron plum - chr3R 26519613 intron,5` UTR plum -,CR45226 + chr3R_21_26515001 chr3R_26515001 RAL-426 2492 chr3R 26540986 26541030 chr3R 26541086 26541118 9 95 1.5 2.5 2.0 3.0 132 chr3R 26540986 intron scrib + chr3R 26541052 intron scrib + chr3R 26541118 intron scrib + chr3R_9_26540001 chr3R_26540001 RAL-426 2493 chr3R 26542052 26542077 chr3R 26542163 26542182 9 107 4.5 5.5 5.0 1.5 130 chr3R 26542052 intron scrib + chr3R 26542117 intron scrib + chr3R 26542182 intron scrib + chr3R_9_26540001 chr3R_26540001 RAL-426 2494 chr3R 26558307 26558322 chr3R 26565639 26565642 Stalker4 4 7328 7.5 2.5 5.0 0.7 7335 chr3R 26558307 intron scrib + chr3R 26561974 intron scrib + chr3R 26565642 intron scrib + chr3R_4_26560001 chr3R_26560001 RAL-426 2495 chr3R 26558324 26558359 chr3R 26565637 26565671 Stalker4 9 7311 3.5 2.5 3.0 2.2 7347 chr3R 26558324 intron scrib + chr3R 26561998 intron scrib + chr3R 26565671 intron scrib + chr3R_9_26560001 chr3R_26560001 RAL-426 2496 chr3R 26607731 26607760 chr3R 26607814 26607847 18 88 5.5 7.0 6.2 2.5 116 chr3R 26607731 5` UTR CR44951 + chr3R 26607789 5` UTR CR44951 + chr3R 26607847 5` UTR CR44951 + chr3R_18_26605001 chr3R_26605001 RAL-426 2497 chr3R 26641618 26641640 chr3R 26641724 26641738 4 104 11.0 2.0 6.5 0.5 120 chr3R 26641618 intergenic not near genes chr3R 26641678 intergenic not near genes chr3R 26641738 intergenic not near genes chr3R_4_26640001 chr3R_26640001 RAL-426 2498 chr3R 26641648 26641657 chr3R 26641723 26641751 4 88 6.5 2.0 4.2 0.8 103 chr3R 26641648 intergenic not near genes chr3R 26641700 intergenic not near genes chr3R 26641751 intergenic not near genes chr3R_4_26640001 chr3R_26640001 RAL-426 2499 chr3R 26642718 26642742 chr3R 26643129 26643155 jockey 12 411 11.0 8.0 9.5 1.1 437 chr3R 26642718 intergenic not near genes chr3R 26642936 intergenic not near genes chr3R 26643155 intergenic not near genes chr3R_12_26640001 chr3R_26640001 RAL-426 2500 chr3R 26642744 26642762 chr3R 26643128 26643153 jockey 6 402 8.5 7.5 8.0 0.7 409 chr3R 26642744 intergenic not near genes chr3R 26642948 intergenic not near genes chr3R 26643153 intergenic not near genes chr3R_6_26640001 chr3R_26640001 RAL-426 2501 chr3R 26651531 26651548 chr3R 26651614 26651642 9 99 4.5 7.0 5.8 1.3 111 chr3R 26651531 intron beat-VII - chr3R 26651586 intron beat-VII - chr3R 26651642 intron beat-VII - chr3R_9_26650001 chr3R_26650001 RAL-426 2502 chr3R 21907534 21907535 chr3R 26659332 26659337 6 4751800 25.5 23.5 24.5 0.2 4751803 chr3R 21907534 intergenic CG6678 + chr3R 24283436 intergenic CR45662 - chr3R 26659337 intron beat-VII - chr3R_6_24280001 chr3R_24280001 RAL-426 2503 chr3R 26710822 26710854 chr3R 26710919 26710958 21 101 4.0 8.5 6.2 2.9 136 chr3R 26710822 intron amon - chr3R 26710890 intron amon - chr3R 26710958 intron amon - chr3R_21_26710001 chr3R_26710001 RAL-426 2504 chr3R 26713882 26713893 chr3R 26713944 26713997 5 81 2.0 3.5 2.8 1.3 115 chr3R 26713882 5` UTR amon - chr3R 26713940 5` UTR amon - chr3R 26713997 5` UTR amon - chr3R_5_26710001 chr3R_26710001 RAL-426 2505 chr3R 26767352 26767395 chr3R 26767445 26767476 7 87 3.5 2.5 3.0 1.8 124 chr3R 26767352 intergenic not near genes chr3R 26767414 intergenic not near genes chr3R 26767476 intergenic not near genes chr3R_7_26765001 chr3R_26765001 RAL-426 2506 chr3R 26770220 26770272 chr3R 26770317 26770365 17 96 4.5 6.0 5.2 2.7 145 chr3R 26770220 intergenic CR45563 + chr3R 26770292 intergenic CR45563 + chr3R 26770365 intergenic not near genes chr3R_17_26770001 chr3R_26770001 RAL-426 2507 chr3R 26810540 26810573 chr3R 26811045 26811078 roo 8 502 2.5 8.0 5.2 1.3 538 chr3R 26810540 intron Tl + chr3R 26810809 intron Tl + chr3R 26811078 intron Tl + chr3R_8_26810001 chr3R_26810001 RAL-426 2508 chr3R 26848034 26848071 chr3R 26848132 26848169 8 97 2.0 3.0 2.5 2.3 135 chr3R 26848034 intron Lerp - chr3R 26848102 intron Lerp - chr3R 26848169 intron Lerp - chr3R_8_26845001 chr3R_26845001 RAL-426 2509 chr3R 26852465 26852505 chr3R 26852572 26852598 5 100 0.5 5.0 2.8 1.3 133 chr3R 26852465 intron Lerp - chr3R 26852532 intron Lerp - chr3R 26852598 intron Lerp - chr3R_5_26850001 chr3R_26850001 RAL-426 2510 chr3R 27007390 27007411 chr3R 27016545 27016566 roo 4 9155 7.5 4.0 5.8 0.6 9176 chr3R 27007390 intron RYa-R + chr3R 27011978 intron RYa-R + chr3R 27016566 intron RYa-R + chr3R_4_27010001 chr3R_27010001 RAL-426 2511 chr3R 27007412 27007434 chr3R 27016542 27016563 roo 6 9138 4.0 4.0 4.0 1.2 9151 chr3R 27007412 intron RYa-R + chr3R 27011988 intron RYa-R + chr3R 27016563 intron RYa-R + chr3R_6_27010001 chr3R_27010001 RAL-426 2512 chr3R 27027664 27027701 chr3R 27027767 27027803 5 102 4.0 2.5 3.2 1.2 139 chr3R 27027664 intron RYa-R + chr3R 27027734 intron RYa-R + chr3R 27027803 intron RYa-R + chr3R_5_27025001 chr3R_27025001 RAL-426 2513 chr3R 27028702 27028756 chr3R 27028801 27028855 13 96 1.0 1.0 1.0 6.5 153 chr3R 27028702 intron RYa-R + chr3R 27028778 intron RYa-R + chr3R 27028855 intron RYa-R + chr3R_13_27025001 chr3R_27025001 RAL-426 2514 chr3R 27140502 27140548 chr3R 27148127 27148173 412 18 7622 4.0 4.0 4.0 3.6 7671 chr3R 27140502 intron CG6051 - chr3R 27144338 intron CG6051 - chr3R 27148173 intron CG6051 - chr3R_18_27140001 chr3R_27140001 RAL-426 2515 chr3R 27245585 27245610 chr3R 27245680 27245704 4 94 4.0 1.0 2.5 1.1 119 chr3R 27245585 intergenic CG18766 - chr3R 27245644 intergenic CG18766 - chr3R 27245704 intergenic CG18766 - chr3R_4_27245001 chr3R_27245001 RAL-426 2516 chr3R 27292275 27292290 chr3R 27292389 27292396 5 115 5.0 1.5 3.2 1.2 121 chr3R 27292275 intergenic CG3348 - chr3R 27292336 intergenic CG3348 - chr3R 27292396 intergenic CG3348 - chr3R_5_27290001 chr3R_27290001 RAL-426 2517 chr3R 27301011 27301055 chr3R 27301392 27301436 17 379 6.0 4.5 5.2 2.7 425 chr3R 27301011 intron CG3339 - chr3R 27301224 intron CG3339 - chr3R 27301436 intron CG3339 - chr3R_17_27300001 chr3R_27300001 RAL-426 2518 chr3R 27315999 27316012 chr3R 27316080 27316087 5 82 7.5 1.5 4.5 0.9 88 chr3R 27315999 intron CG3339 - chr3R 27316043 intron CG3339 - chr3R 27316087 exon CG3339 - chr3R_5_27315001 chr3R_27315001 RAL-426 2519 chr3R 27317085 27317104 chr3R 27317180 27317203 5 99 10.0 8.5 9.2 0.5 118 chr3R 27317085 intron CG3339 - chr3R 27317144 intron CG3339 - chr3R 27317203 intron CG3339 - chr3R_5_27315001 chr3R_27315001 RAL-426 2520 chr3R 27329457 27329498 chr3R 27329554 27329594 9 96 3.0 6.0 4.5 1.6 137 chr3R 27329457 intergenic CG3330 - chr3R 27329526 intergenic CG3330 - chr3R 27329594 intergenic CG3330 - chr3R_9_27325001 chr3R_27325001 RAL-426 2521 chr3R 27335930 27335962 chr3R 27336030 27336063 5 98 0.5 0.0 0.2 4.2 133 chr3R 27335930 intergenic not near genes chr3R 27335996 intergenic not near genes chr3R 27336063 intergenic not near genes chr3R_5_27335001 chr3R_27335001 RAL-426 2522 chr3R 27342786 27342822 chr3R 27351373 27351421 Tirant 12 8599 5.5 6.0 5.8 1.8 8635 chr3R 27342786 intron CG42534 + chr3R 27347104 intron CG42534 + chr3R 27351421 intron CG42534 + chr3R_12_27345001 chr3R_27345001 RAL-426 2523 chr3R 27353298 27353321 chr3R 27353403 27353426 8 104 8.0 3.0 5.5 1.2 128 chr3R 27353298 intron CG42534 + chr3R 27353362 intron CG42534 + chr3R 27353426 intron CG42534 + chr3R_8_27350001 chr3R_27350001 RAL-426 2524 chr3R 27492376 27492405 chr3R 27492474 27492512 7 104 5.0 1.5 3.2 1.7 136 chr3R 27492376 intergenic not near genes chr3R 27492444 intergenic not near genes chr3R 27492512 intergenic not near genes chr3R_7_27490001 chr3R_27490001 RAL-426 2525 chr3R 27496576 27496603 chr3R 27496701 27496728 5 125 4.5 4.5 4.5 0.9 152 chr3R 27496576 intergenic not near genes chr3R 27496652 intergenic not near genes chr3R 27496728 intergenic not near genes chr3R_5_27495001 chr3R_27495001 RAL-426 2526 chr3R 27517424 27517453 chr3R 27517538 27517578 7 118 2.5 5.5 4.0 1.4 154 chr3R 27517424 intergenic CG13972 - chr3R 27517501 intergenic CG13972 - chr3R 27517578 intergenic CG13972 - chr3R_7_27515001 chr3R_27515001 RAL-426 2527 chr3R 27521141 27521184 chr3R 27530370 27530413 roo 5 9227 3.5 1.5 2.5 1.4 9272 chr3R 27521141 intron CG12885 + chr3R 27525777 intron CG12885 + chr3R 27530413 intron CG12885 + chr3R_5_27525001 chr3R_27525001 RAL-426 2528 chr3R 27578470 27578509 chr3R 27578573 27578619 8 102 6.0 3.0 4.5 1.5 149 chr3R 27578470 intron wdb - chr3R 27578544 intron wdb - chr3R 27578619 intron wdb - chr3R_8_27575001 chr3R_27575001 RAL-426 2529 chr3R 27706756 27706810 chr3R 27706853 27706854 15 88 5.5 4.0 4.8 2.6 98 chr3R 27706756 intergenic CG12428 -,CG12877 + chr3R 27706805 intergenic CG12428 -,CG12877 + chr3R 27706854 intergenic CG12428 -,CG12877 + chr3R_15_27705001 chr3R_27705001 RAL-426 2530 chr3R 27718556 27718600 chr3R 27718655 27718699 9 95 3.5 1.0 2.2 2.8 143 chr3R 27718556 intergenic not near genes chr3R 27718628 intergenic not near genes chr3R 27718699 intergenic not near genes chr3R_9_27715001 chr3R_27715001 RAL-426 2531 chr3R 27725534 27725599 chr3R 27731013 27731044 I-element 4 5461 2.0 0.0 1.0 2.0 5510 chr3R 27725534 intergenic not near genes chr3R 27728289 intergenic not near genes chr3R 27731044 intergenic not near genes chr3R_4_27725001 chr3R_27725001 RAL-426 2532 chr3R 27799937 27799964 chr3R 27800024 27800066 10 100 3.5 6.5 5.0 1.7 129 chr3R 27799937 intron CG34353 - chr3R 27800002 intron CG34353 - chr3R 27800066 intron CG34353 - chr3R_10_27795001 chr3R_27795001 RAL-426 2533 chr3R 27856741 27856787 chr3R 27858244 27858268 hopper2 16 1494 5.0 4.5 4.8 2.8 1527 chr3R 27856741 intron CG34353 - chr3R 27857504 intron CG34353 - chr3R 27858268 intron CG34353 - chr3R_16_27855001 chr3R_27855001 RAL-426 2534 chr3R 27862944 27862981 chr3R 27868267 27868276 Transpac 10 5318 2.5 3.0 2.8 2.6 5332 chr3R 27862944 intron CG34353 - chr3R 27865610 intron CG34353 - chr3R 27868276 intron CG34353 - chr3R_10_27865001 chr3R_27865001 RAL-426 2535 chr3R 27875686 27875722 chr3R 27882757 27882796 297 11 7071 4.0 7.0 5.5 1.7 7110 chr3R 27875686 intron CG34353 - chr3R 27879241 intron CG34353 - chr3R 27882796 intron CG34353 - chr3R_11_27875001 chr3R_27875001 RAL-426 2536 chr3R 28068474 28068516 chr3R 28073936 28073963 I-element 6 5459 1.0 2.0 1.5 2.4 5489 chr3R 28068474 intron CG34362 + chr3R 28071218 intron CG34362 + chr3R 28073963 intron CG34362 + chr3R_6_28070001 chr3R_28070001 RAL-426 2537 chr3R 28099165 28099187 chr3R 28099304 28099326 4 138 4.5 4.0 4.2 0.8 161 chr3R 28099165 intergenic not near genes chr3R 28099246 intergenic not near genes chr3R 28099326 intergenic not near genes chr3R_4_28095001 chr3R_28095001 RAL-426 2538 chr3R 28173653 28173696 chr3R 28181102 28181145 mdg1 12 7449 6.0 3.0 4.5 2.2 7492 chr3R 28173653 intron CG34354 + chr3R 28177399 intron CG34354 + chr3R 28181145 intron CG34354 + chr3R_12_28175001 chr3R_28175001 RAL-426 2539 chr3R 28223753 28223770 chr3R 28223840 28223880 4 104 5.5 3.0 4.2 0.8 127 chr3R 28223753 intron CG34354 + chr3R 28223816 intron CG34354 + chr3R 28223880 intron CG34354 + chr3R_4_28220001 chr3R_28220001 RAL-426 2540 chr3R 28253332 28253366 chr3R 28255861 28255896 jockey 6 2528 4.0 6.5 5.2 1.0 2564 chr3R 28253332 intergenic not near genes chr3R 28254614 intergenic not near genes chr3R 28255896 intergenic not near genes chr3R_6_28250001 chr3R_28250001 RAL-426 2541 chr3R 28262653 28262685 chr3R 28262749 28262780 12 95 2.5 7.0 4.8 2.1 127 chr3R 28262653 intergenic CG43125 - chr3R 28262716 intergenic CG43125 - chr3R 28262780 exon CG43125 - chr3R_12_28260001 chr3R_28260001 RAL-426 2542 chr3R 28301770 28301816 chr3R 28301871 28301918 15 98 2.0 1.5 1.8 5.4 148 chr3R 28301770 intergenic not near genes chr3R 28301844 intergenic not near genes chr3R 28301918 intergenic not near genes chr3R_15_28300001 chr3R_28300001 RAL-426 2543 chr3R 28302095 28302116 chr3R 28302557 28302578 jockey 11 462 3.5 2.5 3.0 2.8 483 chr3R 28302095 intergenic not near genes chr3R 28302336 intergenic not near genes chr3R 28302578 intergenic not near genes chr3R_11_28300001 chr3R_28300001 RAL-426 2544 chr3R 28331501 28331528 chr3R 28331600 28331627 4 99 2.0 4.5 3.2 1.0 126 chr3R 28331501 intron larp - chr3R 28331564 intron larp - chr3R 28331627 intron larp - chr3R_4_28330001 chr3R_28330001 RAL-426 2545 chr3R 28345637 28345663 chr3R 28345733 28345734 4 90 7.5 2.5 5.0 0.7 97 chr3R 28345637 intergenic Moca-cyp + chr3R 28345686 intergenic not near genes chr3R 28345734 intergenic not near genes chr3R_4_28345001 chr3R_28345001 RAL-426 2546 chr3R 28393684 28393730 chr3R 28393804 28393850 13 120 4.5 3.0 3.8 2.7 166 chr3R 28393684 intergenic not near genes chr3R 28393767 intergenic not near genes chr3R 28393850 intergenic not near genes chr3R_13_28390001 chr3R_28390001 RAL-426 2547 chr3R 28594099 28594129 chr3R 28594181 28594193 6 83 1.5 1.5 1.5 2.4 94 chr3R 28594099 5` UTR CR43440 + chr3R 28594146 5` UTR CR43440 + chr3R 28594193 5` UTR CR43440 + chr3R_6_28590001 chr3R_28590001 RAL-426 2548 chr3R 28616471 28616501 chr3R 28616585 28616615 10 114 0.0 9.5 4.8 1.7 144 chr3R 28616471 intron CG10011 - chr3R 28616543 intron CG10011 - chr3R 28616615 intron CG10011 - chr3R_10_28615001 chr3R_28615001 RAL-426 2549 chr3R 28758302 28758319 chr3R 28771329 28771344 Stalker4 6 13026 4.0 3.5 3.8 1.2 13042 chr3R 28758302 intergenic aqrs - chr3R 28764823 intergenic not near genes chr3R 28771344 intergenic not near genes chr3R_6_28760001 chr3R_28760001 RAL-426 2550 chr3R 28792883 28792904 chr3R 28797966 28797997 jockey 5 5094 5.0 3.5 4.2 1.0 5114 chr3R 28792883 intergenic not near genes chr3R 28795440 intergenic not near genes chr3R 28797997 intergenic not near genes chr3R_5_28795001 chr3R_28795001 RAL-426 2551 chr3R 28805657 28805699 chr3R 28805755 28805797 9 96 3.0 11.0 7.0 1.1 140 chr3R 28805657 intergenic not near genes chr3R 28805727 intergenic not near genes chr3R 28805797 intergenic not near genes chr3R_9_28805001 chr3R_28805001 RAL-426 2552 chr3R 28823097 28823124 chr3R 28823193 28823221 4 96 6.5 6.5 6.5 0.5 124 chr3R 28823097 exon CG1647 + chr3R 28823159 exon CG1647 + chr3R 28823221 exon CG1647 + chr3R_4_28820001 chr3R_28820001 RAL-426 2553 chr3R 28823131 28823141 chr3R 28823186 28823197 11 74 4.5 6.5 5.5 1.7 66 chr3R 28823131 exon CG1647 + chr3R 28823164 exon CG1647 + chr3R 28823197 exon CG1647 + chr3R_11_28820001 chr3R_28820001 RAL-426 2554 chr3R 21907534 21907536 chr3R 28831801 28831802 110 6924267 26.0 21.0 23.5 4.5 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_110_25365001 chr3R_25365001 RAL-426 2555 chr3R 28992256 28992261 chr3R 28992354 28992361 4 100 0.0 6.0 3.0 1.0 105 chr3R 28992256 intergenic not near genes chr3R 28992308 intergenic not near genes chr3R 28992361 intergenic not near genes chr3R_4_28990001 chr3R_28990001 RAL-426 2556 chr3R 28992263 28992301 chr3R 28992349 28992358 13 88 0.0 5.5 2.8 3.4 95 chr3R 28992263 intergenic not near genes chr3R 28992310 intergenic not near genes chr3R 28992358 intergenic not near genes chr3R_13_28990001 chr3R_28990001 RAL-426 2557 chr3R 29011965 29011995 chr3R 29012075 29012123 5 121 6.0 0.0 3.0 1.2 158 chr3R 29011965 intron wat - chr3R 29012044 intron wat - chr3R 29012123 intron wat - chr3R_5_29010001 chr3R_29010001 RAL-426 2558 chr3R 21907534 21907536 chr3R 29013340 29013340 7 7105806 26.0 18.5 22.2 0.3 7105806 chr3R 21907534 intergenic CG6678 + chr3R 25460437 intron Fur1 - chr3R 29013340 intron wat - chr3R_7_25460001 chr3R_25460001 RAL-426 2559 chr3R 29023221 29023265 chr3R 29023343 29023384 15 122 4.5 4.5 4.5 2.7 163 chr3R 29023221 5` UTR CR45567 + chr3R 29023302 5` UTR CR45567 + chr3R 29023384 5` UTR CR45567 + chr3R_15_29020001 chr3R_29020001 RAL-426 2560 chr3R 29032727 29032758 chr3R 29032824 29032855 5 93 8.5 2.0 5.2 0.8 128 chr3R 29032727 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032791 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032855 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R_5_29030001 chr3R_29030001 RAL-426 2561 chr3R 29032766 29032774 chr3R 29032823 29032852 4 67 4.0 1.5 2.8 1.1 86 chr3R 29032766 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032809 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032852 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R_4_29030001 chr3R_29030001 RAL-426 2562 chr3R 29070037 29070068 chr3R 29070138 29070169 9 99 3.5 5.0 4.2 1.7 132 chr3R 29070037 intron CG11873 + chr3R 29070103 intron CG11873 + chr3R 29070169 intron CG11873 + chr3R_9_29070001 chr3R_29070001 RAL-426 2563 chr3R 29079386 29079405 chr3R 29080778 29080781 NOF 6 1387 1.0 3.0 2.0 2.0 1395 chr3R 29079386 intron CG11873 + chr3R 29080084 intron CG11873 + chr3R 29080781 intron CG11873 + chr3R_6_29080001 chr3R_29080001 RAL-426 2564 chr3R 29213049 29213090 chr3R 29213144 29213193 16 102 7.0 9.5 8.2 1.7 144 chr3R 29213049 intergenic not near genes chr3R 29213121 intergenic not near genes chr3R 29213193 intergenic not near genes chr3R_16_29210001 chr3R_29210001 RAL-426 2565 chr3R 29237253 29237261 chr3R 29239277 29239302 4 2035 24.0 9.0 16.5 0.2 2049 chr3R 29237253 exon CG11951 - chr3R 29238278 intron CG11951 - chr3R 29239302 exon CG31427 - chr3R_4_29235001 chr3R_29235001 RAL-426 2566 chr3R 29237264 29237281 chr3R 29239276 29239320 7 2020 25.0 8.5 16.8 0.4 2056 chr3R 29237264 exon CG11951 - chr3R 29238292 intron CG11951 - chr3R 29239320 exon CG31427 - chr3R_7_29235001 chr3R_29235001 RAL-426 2567 chr3R 29240291 29240326 chr3R 29240394 29240429 8 103 5.0 0.0 2.5 2.3 138 chr3R 29240291 intron CG31427 - chr3R 29240360 5` UTR CG31427 - chr3R 29240429 intergenic CG31427 -,CG31445 - chr3R_8_29240001 chr3R_29240001 RAL-426 2568 chr3R 29256250 29256299 chr3R 29256350 29256399 14 95 2.0 3.5 2.8 3.7 149 chr3R 29256250 intergenic CG45544 +,stg - chr3R 29256324 intergenic CG45544 + chr3R 29256399 intergenic CG45544 + chr3R_14_29255001 chr3R_29255001 RAL-426 2569 chr3R 29265715 29265729 chr3R 29265819 29265853 5 119 2.5 3.0 2.8 1.3 138 chr3R 29265715 intergenic not near genes chr3R 29265784 intergenic not near genes chr3R 29265853 intergenic not near genes chr3R_5_29265001 chr3R_29265001 RAL-426 2570 chr3R 29282789 29282802 chr3R 29282895 29282908 4 106 7.5 11.0 9.2 0.4 119 chr3R 29282789 intergenic not near genes chr3R 29282848 intergenic not near genes chr3R 29282908 intergenic not near genes chr3R_4_29280001 chr3R_29280001 RAL-426 2571 chr3R 29319802 29319859 chr3R 29320141 29320178 jockey 15 335 2.0 3.5 2.8 3.9 376 chr3R 29319802 intergenic Cnx99A - chr3R 29319990 intergenic Cnx99A - chr3R 29320178 intergenic not near genes chr3R_15_29315001 chr3R_29315001 RAL-426 2572 chr3R 29332264 29332360 chr3R 29332361 29332467 16 110 0.0 0.0 0.0 16.0 203 chr3R 29332264 intergenic not near genes chr3R 29332366 intergenic not near genes chr3R 29332467 intergenic not near genes chr3R_16_29330001 chr3R_29330001 RAL-426 2573 chr3R 29355936 29355988 chr3R 29356035 29356087 16 97 3.5 6.0 4.8 2.8 151 chr3R 29355936 intergenic CR45547 - chr3R 29356012 intergenic CR45547 - chr3R 29356087 intergenic CR45547 - chr3R_16_29355001 chr3R_29355001 RAL-426 2574 chr3R 29406602 29406643 chr3R 29407908 29407949 jockey 10 1303 4.0 5.5 4.8 1.7 1347 chr3R 29406602 intron Ptp99A + chr3R 29407276 intron Ptp99A + chr3R 29407949 intron Ptp99A + chr3R_10_29405001 chr3R_29405001 RAL-426 2575 chr3R 29429774 29429798 chr3R 29429870 29429896 4 97 3.5 1.5 2.5 1.1 122 chr3R 29429774 intron Ptp99A + chr3R 29429835 intron Ptp99A + chr3R 29429896 intron Ptp99A + chr3R_4_29425001 chr3R_29425001 RAL-426 2576 chr3R 29449346 29449389 chr3R 29449441 29449487 21 97 1.5 3.5 2.5 6.0 141 chr3R 29449346 intron Ptp99A + chr3R 29449416 intron Ptp99A + chr3R 29449487 intron Ptp99A + chr3R_21_29445001 chr3R_29445001 RAL-426 2577 chr3R 29451577 29451623 chr3R 29451680 29451726 12 96 1.5 4.5 3.0 3.0 149 chr3R 29451577 intron Ptp99A + chr3R 29451652 intron Ptp99A + chr3R 29451726 intron Ptp99A + chr3R_12_29450001 chr3R_29450001 RAL-426 2578 chr3R 29471994 29472007 chr3R 29472103 29472107 4 109 12.0 5.0 8.5 0.4 113 chr3R 29471994 intron Ptp99A + chr3R 29472050 intron Ptp99A + chr3R 29472107 intron Ptp99A + chr3R_4_29470001 chr3R_29470001 RAL-426 2579 chr3R 29472013 29472038 chr3R 29472102 29472115 7 88 6.5 5.0 5.8 1.0 102 chr3R 29472013 intron Ptp99A + chr3R 29472064 intron Ptp99A + chr3R 29472115 intron Ptp99A + chr3R_7_29470001 chr3R_29470001 RAL-426 2580 chr3R 29474421 29474460 chr3R 29474528 29474567 8 105 3.0 5.5 4.2 1.5 146 chr3R 29474421 intron Ptp99A + chr3R 29474494 intron Ptp99A + chr3R 29474567 intron Ptp99A + chr3R_8_29470001 chr3R_29470001 RAL-426 2581 chr3R 29505874 29505925 chr3R 29505969 29506021 10 86 1.5 3.5 2.5 2.9 147 chr3R 29505874 intergenic not near genes chr3R 29505948 intergenic not near genes chr3R 29506021 intergenic not near genes chr3R_10_29505001 chr3R_29505001 RAL-426 2582 chr3R 29539410 29539448 chr3R 29539506 29539539 8 90 2.5 0.5 1.5 3.2 129 chr3R 29539410 intergenic not near genes chr3R 29539474 intergenic not near genes chr3R 29539539 intergenic not near genes chr3R_8_29535001 chr3R_29535001 RAL-426 2583 chr3R 29655634 29655668 chr3R 29655733 29655767 18 96 6.0 2.5 4.2 3.5 133 chr3R 29655634 intron Dop1R2 - chr3R 29655700 intron Dop1R2 - chr3R 29655767 intron Dop1R2 - chr3R_18_29655001 chr3R_29655001 RAL-426 2584 chr3R 29656381 29656407 chr3R 29656480 29656491 4 93 2.5 7.0 4.8 0.7 110 chr3R 29656381 intron Dop1R2 - chr3R 29656436 intron Dop1R2 - chr3R 29656491 intron Dop1R2 - chr3R_4_29655001 chr3R_29655001 RAL-426 2585 chr3R 29738249 29738300 chr3R 29739736 29739778 hobo 17 1483 4.5 2.0 3.2 4.0 1529 chr3R 29738249 intergenic CG1969 +,CG7598 + chr3R 29739014 intron CG1969 + chr3R 29739778 5` UTR CG1969 + chr3R_17_29735001 chr3R_29735001 RAL-426 2586 chr3R 29760343 29760393 chr3R 29761563 29761614 pogo 11 1210 5.5 2.0 3.8 2.3 1271 chr3R 29760343 intergenic not near genes chr3R 29760978 intergenic not near genes chr3R 29761614 intergenic not near genes chr3R_11_29760001 chr3R_29760001 RAL-426 2587 chr3R 29773882 29773905 chr3R 29773991 29773998 6 104 1.5 0.5 1.0 3.0 116 chr3R 29773882 intron kay + chr3R 29773940 intron kay + chr3R 29773998 intron kay + chr3R_6_29770001 chr3R_29770001 RAL-426 2588 chr3R 29854829 29854858 chr3R 29854920 29854958 9 98 7.0 9.0 8.0 1.0 129 chr3R 29854829 3` UTR dgt1 - chr3R 29854894 exon dgt1 - chr3R 29854958 exon dgt1 - chr3R_9_29850001 chr3R_29850001 RAL-426 2589 chr3R 29882004 29882047 chr3R 29891178 29891223 roo 14 9175 7.5 4.5 6.0 2.0 9219 chr3R 29882004 intron CG31038 + chr3R 29886614 intron CG31038 + chr3R 29891223 intron CG31038 + chr3R_14_29885001 chr3R_29885001 RAL-426 2590 chr3R 30032151 30032181 chr3R 30032241 30032253 5 86 3.0 4.5 3.8 1.0 102 chr3R 30032151 intron Axn + chr3R 30032202 intron Axn + chr3R 30032253 intron Axn + chr3R_5_30030001 chr3R_30030001 RAL-426 2591 chr3R 30050285 30050320 chr3R 30050406 30050447 6 125 2.5 3.0 2.8 1.6 162 chr3R 30050285 intron,intron CG15528 -,CR44046 + chr3R 30050366 intron,intron CG15528 -,CR44046 + chr3R 30050447 intron,intron CG15528 -,CR44046 + chr3R_6_30050001 chr3R_30050001 RAL-426 2592 chr3R 30084864 30084882 chr3R 30086325 30086345 hobo 5 1477 0.0 5.0 2.5 1.4 1481 chr3R 30084864 intron sima + chr3R 30085604 intron sima + chr3R 30086345 intron sima + chr3R_5_30085001 chr3R_30085001 RAL-426 2593 chr3R 30170739 30170791 chr3R 30170846 30170898 22 106 4.5 5.5 5.0 3.7 159 chr3R 30170739 intron CG31028 - chr3R 30170818 intron CG31028 - chr3R 30170898 intron CG31028 - chr3R_22_30170001 chr3R_30170001 RAL-426 2594 chr3R 30183208 30183245 chr3R 30183337 30183374 6 128 1.5 7.5 4.5 1.1 166 chr3R 30183208 intergenic not near genes chr3R 30183291 intergenic not near genes chr3R 30183374 intergenic CR44262 - chr3R_6_30180001 chr3R_30180001 RAL-426 2595 chr3R 30210594 30210673 chr3R 30210727 30210772 4 108 0.0 4.5 2.2 1.2 178 chr3R 30210594 intergenic Anp +,CecA1 + chr3R 30210683 intergenic CecA1 +,Anp + chr3R 30210772 intergenic CecA1 +,Anp + chr3R_4_30210001 chr3R_30210001 RAL-426 2596 chr3R 30238750 30238793 chr3R 30239936 30239959 1360 4 1180 0.0 5.0 2.5 1.1 1209 chr3R 30238750 intergenic not near genes chr3R 30239354 intergenic not near genes chr3R 30239959 intergenic not near genes chr3R_4_30235001 chr3R_30235001 RAL-426 2597 chr3R 30268224 30268441 chr3R 30268323 30268494 13 86 5.0 4.5 4.8 2.2 270 chr3R 30268224 intergenic not near genes chr3R 30268359 intergenic not near genes chr3R 30268494 intergenic not near genes chr3R_13_30265001 chr3R_30265001 RAL-426 2598 chr3R 30307130 30307145 chr3R 30307213 30307246 5 94 5.5 6.0 5.8 0.7 116 chr3R 30307130 intron hdc + chr3R 30307188 intron hdc + chr3R 30307246 intron hdc + chr3R_5_30305001 chr3R_30305001 RAL-426 2599 chr3R 30317308 30317358 chr3R 30324918 30324969 roo 6 7601 0.5 3.0 1.8 2.1 7661 chr3R 30317308 intron hdc + chr3R 30321138 intron hdc + chr3R 30324969 intron hdc + chr3R_6_30320001 chr3R_30320001 RAL-426 2600 chr3R 30375525 30375572 chr3R 30383168 30383215 412 6 7643 1.5 4.5 3.0 1.5 7690 chr3R 30375525 intergenic not near genes chr3R 30379370 intergenic not near genes chr3R 30383215 intergenic not near genes chr3R_6_30375001 chr3R_30375001 RAL-426 2601 chr3R 30396198 30396233 chr3R 30404483 30404515 roo 6 8285 3.5 5.0 4.2 1.2 8317 chr3R 30396198 intergenic not near genes chr3R 30400356 intergenic not near genes chr3R 30404515 5` UTR CR45570 + chr3R_6_30400001 chr3R_30400001 RAL-426 2602 chr3R 30456379 30456421 chr3R 30456478 30456521 10 99 1.0 4.0 2.5 2.9 142 chr3R 30456379 intergenic CG2224 - chr3R 30456450 3` UTR CG2224 - chr3R 30456521 3` UTR CG2224 - chr3R_10_30455001 chr3R_30455001 RAL-426 2603 chr3R 30457996 30458019 chr3R 30458095 30458105 8 95 6.5 3.5 5.0 1.3 109 chr3R 30457996 intron CG2224 - chr3R 30458050 intron CG2224 - chr3R 30458105 intron CG2224 - chr3R_8_30455001 chr3R_30455001 RAL-426 2604 chr3R 30458021 30458048 chr3R 30458091 30458146 16 92 4.5 3.5 4.0 3.2 125 chr3R 30458021 intron CG2224 - chr3R 30458084 intron CG2224 - chr3R 30458146 intron CG2224 - chr3R_16_30455001 chr3R_30455001 RAL-426 2605 chr3R 30466688 30466727 chr3R 30466788 30466805 12 96 3.5 4.5 4.0 2.4 117 chr3R 30466688 intron PH4alphaEFB + chr3R 30466746 intron PH4alphaEFB + chr3R 30466805 intron PH4alphaEFB + chr3R_12_30465001 chr3R_30465001 RAL-426 2606 chr3R 30480494 30480511 chr3R 30482956 30482999 jockey 7 2483 3.0 5.5 4.2 1.3 2505 chr3R 30480494 intron PH4alphaEFB + chr3R 30481746 intron PH4alphaEFB + chr3R 30482999 intron PH4alphaEFB + chr3R_7_30480001 chr3R_30480001 RAL-426 2607 chr3R 30488106 30488122 chr3R 30488205 30488221 4 99 1.5 0.0 0.8 2.2 115 chr3R 30488106 intergenic Jon99Fii - chr3R 30488164 intergenic Jon99Fii - chr3R 30488221 intergenic Jon99Fii - chr3R_4_30485001 chr3R_30485001 RAL-426 2608 chr3R 30571685 30571713 chr3R 30571785 30571813 8 100 0.0 4.0 2.0 2.7 128 chr3R 30571685 intron tmod + chr3R 30571749 intron tmod + chr3R 30571813 exon tmod + chr3R_8_30570001 chr3R_30570001 RAL-426 2609 chr3R 30627596 30627637 chr3R 30627681 30627732 9 83 3.0 6.5 4.8 1.6 136 chr3R 30627596 3` UTR CG2267 - chr3R 30627664 exon CG2267 - chr3R 30627732 exon CG2267 - chr3R_9_30625001 chr3R_30625001 RAL-426 2610 chr3R 30679508 30679548 chr3R 30686988 30687037 blood 9 7486 4.0 3.5 3.8 1.9 7529 chr3R 30679508 intergenic not near genes chr3R 30683272 intergenic not near genes chr3R 30687037 intergenic not near genes chr3R_9_30680001 chr3R_30680001 RAL-426 2611 chr3R 30690153 30690188 chr3R 30690244 30690292 9 101 8.0 4.0 6.0 1.3 139 chr3R 30690153 intergenic Spn100A + chr3R 30690222 intergenic Spn100A + chr3R 30690292 intergenic Spn100A + chr3R_9_30690001 chr3R_30690001 RAL-426 2612 chr3R 30775329 30775342 chr3R 30775425 30775437 7 94 6.5 4.0 5.2 1.1 108 chr3R 30775329 intron zfh1 + chr3R 30775383 intron zfh1 + chr3R 30775437 intron zfh1 + chr3R_7_30775001 chr3R_30775001 RAL-426 2613 chr3R 30818797 30818834 chr3R 30820382 30820419 1360 7 1582 4.5 4.0 4.2 1.3 1622 chr3R 30818797 intron cindr + chr3R 30819608 intron cindr + chr3R 30820419 intron cindr + chr3R_7_30815001 chr3R_30815001 RAL-426 2614 chr3R 30863763 30863812 chr3R 30863908 30863959 17 145 3.0 5.0 4.0 3.4 196 chr3R 30863763 intergenic not near genes chr3R 30863861 intergenic not near genes chr3R 30863959 intergenic not near genes chr3R_17_30860001 chr3R_30860001 RAL-426 2615 chr3R 30864479 30864487 chr3R 30864585 30864594 4 106 13.0 3.5 8.2 0.4 115 chr3R 30864479 intergenic not near genes chr3R 30864536 intergenic not near genes chr3R 30864594 intergenic not near genes chr3R_4_30860001 chr3R_30860001 RAL-426 2616 chr3R 30864495 30864526 chr3R 30864584 30864633 9 100 5.5 3.5 4.5 1.6 138 chr3R 30864495 intergenic not near genes chr3R 30864564 intergenic not near genes chr3R 30864633 intergenic not near genes chr3R_9_30860001 chr3R_30860001 RAL-426 2617 chr3R 30946363 30946411 chr3R 30946475 30946515 4 105 0.0 0.0 0.0 4.0 152 chr3R 30946363 intergenic not near genes chr3R 30946439 intergenic not near genes chr3R 30946515 intergenic not near genes chr3R_4_30945001 chr3R_30945001 RAL-426 2618 chr3R 30972520 30972556 chr3R 30972618 30972659 7 98 2.0 3.5 2.8 1.8 139 chr3R 30972520 intron 5-HT7 - chr3R 30972590 intron 5-HT7 - chr3R 30972659 intron 5-HT7 - chr3R_7_30970001 chr3R_30970001 RAL-426 2619 chr3R 30998121 30998167 chr3R 30998224 30998269 16 101 2.5 4.0 3.2 3.8 148 chr3R 30998121 intron 5-HT7 - chr3R 30998195 intron 5-HT7 - chr3R 30998269 intron 5-HT7 - chr3R_16_30995001 chr3R_30995001 RAL-426 2620 chr3R 31047193 31047248 chr3R 31047507 31047562 13 313 2.0 3.5 2.8 3.4 369 chr3R 31047193 intergenic CanA1 + chr3R 31047378 intergenic not near genes chr3R 31047562 intergenic not near genes chr3R_13_31045001 chr3R_31045001 RAL-426 2621 chr3R 31084904 31084924 chr3R 31084986 31085003 9 92 1.5 2.0 1.8 3.2 99 chr3R 31084904 intergenic not near genes chr3R 31084954 intergenic not near genes chr3R 31085003 intergenic not near genes chr3R_9_31080001 chr3R_31080001 RAL-426 2622 chr3R 31102059 31102072 chr3R 31102136 31102155 4 87 1.0 5.0 3.0 1.0 96 chr3R 31102059 intergenic not near genes chr3R 31102107 intergenic not near genes chr3R 31102155 intergenic not near genes chr3R_4_31100001 chr3R_31100001 RAL-426 2623 chr3R 31413076 31413103 chr3R 31418289 31418299 copia 8 5210 3.5 0.0 1.8 2.9 5223 chr3R 31413076 intron Gprk2 + chr3R 31415688 intron Gprk2 + chr3R 31418299 intron Gprk2 + chr3R_8_31415001 chr3R_31415001 RAL-426 2624 chr3R 31426862 31426907 chr3R 31426974 31427019 16 108 2.0 4.5 3.2 3.8 157 chr3R 31426862 intron Gprk2 + chr3R 31426940 intron Gprk2 + chr3R 31427019 intron Gprk2 + chr3R_16_31425001 chr3R_31425001 RAL-426 2625 chr3R 31482358 31482398 chr3R 31482450 31482465 5 80 6.5 6.0 6.2 0.7 107 chr3R 31482358 intergenic not near genes chr3R 31482412 intergenic not near genes chr3R 31482465 intergenic not near genes chr3R_5_31480001 chr3R_31480001 RAL-426 2626 chr3R 31530831 31530849 chr3R 31531152 31531187 6 334 4.0 6.0 5.0 1.0 356 chr3R 31530831 intergenic not near genes chr3R 31531009 intergenic not near genes chr3R 31531187 intergenic not near genes chr3R_6_31530001 chr3R_31530001 RAL-426 2627 chr3R 31538474 31538511 chr3R 31538568 31538608 13 97 4.5 4.5 4.5 2.4 134 chr3R 31538474 intergenic not near genes chr3R 31538541 intergenic not near genes chr3R 31538608 intergenic not near genes chr3R_13_31535001 chr3R_31535001 RAL-426 2628 chr3R 31610098 31610140 chr3R 31610204 31610216 5 99 4.5 3.5 4.0 1.0 118 chr3R 31610098 intron CycG - chr3R 31610157 intron CycG - chr3R 31610216 intron CycG - chr3R_5_31610001 chr3R_31610001 RAL-426 2629 chr3R 31615142 31615190 chr3R 31615338 31615383 17 189 3.0 1.5 2.2 5.3 241 chr3R 31615142 3` UTR Med + chr3R 31615262 3` UTR Med + chr3R 31615383 3` UTR CG11539 - chr3R_17_31615001 chr3R_31615001 RAL-426 2630 chr3R 31691514 31691561 chr3R 31696300 31696347 Doc 13 4778 3.0 6.0 4.5 2.4 4833 chr3R 31691514 intergenic not near genes chr3R 31693930 intergenic not near genes chr3R 31696347 intergenic not near genes chr3R_13_31690001 chr3R_31690001 RAL-426 2631 chr3R 31808780 31808803 chr3R 31808914 31808941 8 136 6.0 0.5 3.2 1.9 161 chr3R 31808780 intron CG11576 - chr3R 31808860 intron CG11576 - chr3R 31808941 intron CG11576 - chr3R_8_31805001 chr3R_31805001 RAL-426 2632 chr3R 31831521 31831570 chr3R 31831618 31831669 22 95 1.5 6.0 3.8 4.6 148 chr3R 31831521 intron RhoGAP100F + chr3R 31831595 intron RhoGAP100F + chr3R 31831669 intron RhoGAP100F + chr3R_22_31830001 chr3R_31830001 RAL-426 2633 chr3R 31842366 31842403 chr3R 31842647 31842675 9 281 3.0 4.0 3.5 2.0 309 chr3R 31842366 3` UTR RhoGAP100F + chr3R 31842520 3` UTR RhoGAP100F + chr3R 31842675 3` UTR RhoGAP100F + chr3R_9_31840001 chr3R_31840001 RAL-426 2634 chr3R 31897842 31897874 chr3R 31897983 31898024 4 153 2.5 1.0 1.8 1.4 182 chr3R 31897842 intron heph - chr3R 31897933 intron heph - chr3R 31898024 intron heph - chr3R_4_31895001 chr3R_31895001 RAL-426 2635 chr3R 31911661 31911711 chr3R 31911763 31911783 14 98 1.5 5.5 3.5 3.1 122 chr3R 31911661 intron heph - chr3R 31911722 intron heph - chr3R 31911783 intron heph - chr3R_14_31910001 chr3R_31910001 RAL-426 2636 chr3R 31930549 31930589 chr3R 31930640 31930655 11 89 2.0 4.5 3.2 2.6 106 chr3R 31930549 intron heph - chr3R 31930602 intron heph - chr3R 31930655 intron heph - chr3R_11_31930001 chr3R_31930001 RAL-426 2637 chr3R 31931191 31931214 chr3R 31931293 31931317 7 102 5.0 5.0 5.0 1.2 126 chr3R 31931191 intron heph - chr3R 31931254 intron heph - chr3R 31931317 intron heph - chr3R_7_31930001 chr3R_31930001 RAL-426 2638 chr3R 31957966 31958009 chr3R 31958068 31958110 5 102 0.0 4.5 2.2 1.6 144 chr3R 31957966 intron heph - chr3R 31958038 intron heph - chr3R 31958110 intron heph - chr3R_5_31955001 chr3R_31955001 RAL-426 2639 chr3R 31986248 31986259 chr3R 31986710 31986738 4 474 1.5 1.0 1.2 1.8 490 chr3R 31986248 intron,intron heph -,CG2003 + chr3R 31986493 intron,intron heph -,CG2003 + chr3R 31986738 intron,intron heph -,CG2003 + chr3R_4_31985001 chr3R_31985001 RAL-426 2640 chr3R 31997983 31998019 chr3R 32005473 32005488 blood 15 7487 4.5 4.0 4.2 2.9 7505 chr3R 31997983 intron heph - chr3R 32001736 intron heph - chr3R 32005488 intron heph - chr3R_15_32000001 chr3R_32000001 RAL-426 2641 chr3R 32016688 32016741 chr3R 32016787 32016824 11 93 5.0 6.0 5.5 1.7 136 chr3R 32016688 5` UTR CR45557 + chr3R 32016756 5` UTR CR45557 + chr3R 32016824 5` UTR CR45557 + chr3R_11_32015001 chr3R_32015001 RAL-426 2642 chr3R 32034250 32034289 chr3R 32034353 32034392 8 101 4.0 2.5 3.2 1.9 142 chr3R 32034250 intergenic not near genes chr3R 32034321 intergenic not near genes chr3R 32034392 intergenic not near genes chr3R_8_32030001 chr3R_32030001 RAL-426 2643 chr4 76471 76495 chr4 81934 81941 I-element 5 5459 6.0 3.5 4.8 0.9 5470 chr4 76471 intron pan + chr4 79206 intron pan + chr4 81941 intron pan + chr4_5_75001 chr4_75001 RAL-426 2644 chr4 319972 320012 chr4 328168 328194 Stalker2 4 8192 2.5 1.5 2.0 1.3 8222 chr4 319972 3` UTR CG32850 + chr4 324083 intron CG32850 + chr4 328194 3` UTR,3` UTR CG32850 +,PMCA - chr4_4_320001 chr4_320001 RAL-426 2645 chr4 671592 671600 chr4 680189 680203 Tirant 5 8601 10.5 8.5 9.5 0.5 8611 chr4 671592 intron CG11360 + chr4 675898 intron CG11360 + chr4 680203 intron CG11360 + chr4_5_675001 chr4_675001 RAL-426 2646 chr4 671602 671637 chr4 680188 680198 Tirant 11 8588 4.0 8.5 6.2 1.5 8596 chr4 671602 intron CG11360 + chr4 675900 intron CG11360 + chr4 680198 intron CG11360 + chr4_11_675001 chr4_675001 RAL-426 2647 chr4 959618 959648 chr4 959802 959847 8 195 3.0 3.0 3.0 2.0 229 chr4 959618 intergenic CR44030 +,CR45201 - chr4 959732 5` UTR CR44030 + chr4 959847 5` UTR CR44030 + chr4_8_955001 chr4_955001 RAL-426 2648 chr4 972485 972523 chr4 972586 972625 5 99 2.5 3.0 2.8 1.3 140 chr4 972485 intron fuss - chr4 972555 intron fuss - chr4 972625 intron fuss - chr4_5_970001 chr4_970001 RAL-426 2649 chrX 295839 295877 chrX 303479 303517 412 4 7639 3.0 9.5 6.2 0.6 7678 chrX 295839 intron CG3777 + chrX 299678 intron CG3777 + chrX 303517 intron CG3777 + chrX_4_295001 chrX_295001 RAL-426 2650 chrX 318458 318483 chrX 323563 323575 flea 7 5102 6.0 8.0 7.0 0.9 5117 chrX 318458 intron,intron CG3777 +,CG32816 - chrX 321016 intron,intron CG3777 +,CG32816 - chrX 323575 intron,intron CG3777 +,CG32816 - chrX_7_320001 chrX_320001 RAL-426 2651 chrX 428423 428444 chrX 434627 434649 3S18 4 6204 5.5 4.0 4.8 0.7 6226 chrX 428423 intron CG32816 - chrX 431536 intron CG32816 - chrX 434649 intron CG32816 - chrX_4_430001 chrX_430001 RAL-426 2652 chrX 551405 551454 chrX 558985 559023 412 9 7574 6.0 3.5 4.8 1.6 7618 chrX 551405 intron Appl + chrX 555214 intron Appl + chrX 559023 intron Appl + chrX_9_555001 chrX_555001 RAL-426 2653 chrX 602807 602843 chrX 602927 602954 4 106 4.5 6.0 5.2 0.6 147 chrX 602807 intron CG13366 - chrX 602880 intron CG13366 - chrX 602954 intron CG13366 - chrX_4_600001 chrX_600001 RAL-426 2654 chrX 611123 611167 chrX 611233 611260 10 107 5.5 7.0 6.2 1.4 137 chrX 611123 intron CG13366 - chrX 611192 intron CG13366 - chrX 611260 intron CG13366 - chrX_10_610001 chrX_610001 RAL-426 2655 chrX 677426 677445 chrX 677524 677568 5 113 3.5 6.0 4.8 0.9 142 chrX 677426 intergenic not near genes chrX 677497 intergenic not near genes chrX 677568 intergenic not near genes chrX_5_675001 chrX_675001 RAL-426 2656 chrX 802275 802311 chrX 802365 802391 7 85 3.5 5.0 4.2 1.3 116 chrX 802275 exon CG13359 - chrX 802333 exon CG13359 - chrX 802391 exon CG13359 - chrX_7_800001 chrX_800001 RAL-426 2657 chrX 812270 812299 chrX 817912 817950 297 5 5649 2.0 6.5 4.2 1.0 5680 chrX 812270 intron CG43867 - chrX 815110 intron CG43867 - chrX 817950 intron CG43867 - chrX_5_815001 chrX_815001 RAL-426 2658 chrX 827605 827629 chrX 835395 835441 roo 11 7805 6.0 5.5 5.8 1.6 7836 chrX 827605 intron CG43867 - chrX 831523 intron CG43867 - chrX 835441 intron CG43867 - chrX_11_830001 chrX_830001 RAL-426 2659 chrX 906697 906704 chrX 908502 908509 S-element 4 1807 8.0 10.0 9.0 0.4 1812 chrX 906697 intron CG43867 - chrX 907603 intron CG43867 - chrX 908509 intron CG43867 - chrX_4_905001 chrX_905001 RAL-426 2660 chrX 906707 906721 chrX 908495 908503 S-element 5 1795 3.0 10.5 6.8 0.6 1796 chrX 906707 intron CG43867 - chrX 907605 intron CG43867 - chrX 908503 intron CG43867 - chrX_5_905001 chrX_905001 RAL-426 2661 chrX 1051071 1051089 chrX 1051136 1051187 4 82 8.0 9.0 8.5 0.4 116 chrX 1051071 intron CR44779 + chrX 1051129 intron CR44779 + chrX 1051187 intron CR44779 + chrX_4_1050001 chrX_1050001 RAL-426 2662 chrX 1053117 1053120 chrX 16983076 16983077 8 15929957 21.0 20.0 20.5 0.4 15929960 chrX 1053117 intron CR44779 + chrX 9018097 intron,intron rdgA +,CR43836 - chrX 16983077 intron CG45002 - chrX_8_9015001 chrX_9015001 RAL-426 2663 chrX 1253740 1253764 chrX 1253811 1253815 12 92 4.0 5.0 4.5 2.2 75 chrX 1253740 intron Atf3 - chrX 1253778 intron Atf3 - chrX 1253815 intron Atf3 - chrX_12_1250001 chrX_1250001 RAL-426 2664 chrX 1357771 1357794 chrX 1367960 1367984 Doc 11 10188 3.0 6.5 4.8 1.9 10213 chrX 1357771 intergenic png - chrX 1362878 intergenic not near genes chrX 1367984 intergenic not near genes chrX_11_1360001 chrX_1360001 RAL-426 2665 chrX 1428573 1428626 chrX 1428679 1428732 18 102 2.5 5.5 4.0 3.6 159 chrX 1428573 intron futsch + chrX 1428652 intron futsch + chrX 1428732 intron futsch + chrX_18_1425001 chrX_1425001 RAL-426 2666 chrX 1429597 1429629 chrX 1429695 1429706 4 92 8.0 3.5 5.8 0.6 109 chrX 1429597 intron futsch + chrX 1429652 intron futsch + chrX 1429706 intron futsch + chrX_4_1425001 chrX_1425001 RAL-426 2667 chrX 1467324 1467367 chrX 1467469 1467473 8 129 5.5 6.0 5.8 1.2 149 chrX 1467324 intron CG14777 + chrX 1467398 intron CG14777 + chrX 1467473 intron CG14777 + chrX_8_1465001 chrX_1465001 RAL-426 2668 chrX 1518028 1518042 chrX 1523450 1523450 jockey 4 5418 6.5 7.0 6.8 0.5 5422 chrX 1518028 intergenic inc + chrX 1520739 intergenic not near genes chrX 1523450 intergenic not near genes chrX_4_1520001 chrX_1520001 RAL-426 2669 chrX 1518044 1518068 chrX 1523444 1523460 jockey 11 5406 3.5 6.5 5.0 1.8 5416 chrX 1518044 intergenic inc + chrX 1520752 intergenic not near genes chrX 1523460 intergenic not near genes chrX_11_1520001 chrX_1520001 RAL-426 2670 chrX 1554510 1554536 chrX 1554668 1554688 6 158 23.0 19.5 21.2 0.3 178 chrX 1554510 exon Mur2B - chrX 1554599 intron Mur2B - chrX 1554688 exon Mur2B - chrX_6_1550001 chrX_1550001 RAL-426 2671 chrX 1627972 1627999 chrX 1635455 1635470 gtwin 4 7474 2.0 4.0 3.0 1.0 7498 chrX 1627972 intron,intron Mur2B -,br + chrX 1631721 intron,intron Mur2B -,br + chrX 1635470 intron,intron Mur2B -,br + chrX_4_1630001 chrX_1630001 RAL-426 2672 chrX 1930525 1930568 chrX 1938114 1938114 opus 8 7582 1.0 2.0 1.5 3.2 7589 chrX 1930525 intergenic CG11596 + chrX 1934320 intergenic not near genes chrX 1938114 3` UTR CG3857 - chrX_8_1930001 chrX_1930001 RAL-426 2673 chrX 1987472 1987510 chrX 1987596 1987632 13 122 3.5 5.0 4.2 2.5 160 chrX 1987472 intron Hr4 + chrX 1987552 intron Hr4 + chrX 1987632 intron Hr4 + chrX_13_1985001 chrX_1985001 RAL-426 2674 chrX 2045004 2045042 chrX 2045101 2045139 10 97 3.0 3.5 3.2 2.4 135 chrX 2045004 intron,3` UTR CG4313 +,moody - chrX 2045072 intron,3` UTR CG4313 +,moody - chrX 2045139 intron,exon CG4313 +,moody - chrX_10_2045001 chrX_2045001 RAL-426 2675 chrX 2086925 2086971 chrX 2087285 2087307 10 354 4.0 1.0 2.5 2.9 382 chrX 2086925 intron Unc-76 + chrX 2087116 intron Unc-76 + chrX 2087307 intron Unc-76 + chrX_10_2085001 chrX_2085001 RAL-426 2676 chrX 2146676 2146685 chrX 2146765 2146774 4 96 6.0 7.0 6.5 0.5 98 chrX 2146676 intron Pgd + chrX 2146725 intron Pgd + chrX 2146774 intron Pgd + chrX_4_2145001 chrX_2145001 RAL-426 2677 chrX 2399826 2399870 chrX 2408188 2408216 roo 6 8356 3.0 3.5 3.2 1.4 8390 chrX 2399826 intergenic not near genes chrX 2404021 intergenic not near genes chrX 2408216 intergenic not near genes chrX_6_2400001 chrX_2400001 RAL-426 2678 chrX 2568185 2568229 chrX 2568444 2568456 12 253 1.5 2.5 2.0 4.0 271 chrX 2568185 intron Pdfr + chrX 2568320 intron Pdfr + chrX 2568456 intron Pdfr + chrX_12_2565001 chrX_2565001 RAL-426 2679 chrX 2578794 2578840 chrX 2578906 2578946 11 110 4.5 7.5 6.0 1.6 152 chrX 2578794 intergenic Pdfr +,Vha36-3 - chrX 2578870 intergenic Vha36-3 -,Pdfr + chrX 2578946 intergenic Vha36-3 -,Pdfr + chrX_11_2575001 chrX_2575001 RAL-426 2680 chrX 2610369 2610378 chrX 2617505 2617515 HMS-Beagle 8 7137 5.0 3.0 4.0 1.6 7146 chrX 2610369 intergenic CG8636 - chrX 2613942 intergenic not near genes chrX 2617515 intergenic Tsp3A - chrX_8_2610001 chrX_2610001 RAL-426 2681 chrX 2844886 2844933 chrX 2852316 2852363 mdg1 9 7427 2.0 3.0 2.5 2.6 7477 chrX 2844886 intron kirre + chrX 2848624 intron kirre + chrX 2852363 intron kirre + chrX_9_2845001 chrX_2845001 RAL-426 2682 chrX 3058001 3058048 chrX 3058262 3058309 pogo 7 259 2.5 2.5 2.5 2.0 308 chrX 3058001 intron kirre + chrX 3058155 intron kirre + chrX 3058309 intron kirre + chrX_7_3055001 chrX_3055001 RAL-426 2683 chrX 3109426 3109476 chrX 3109523 3109567 15 93 1.5 2.0 1.8 5.4 141 chrX 3109426 intron kirre + chrX 3109496 intron kirre + chrX 3109567 intron kirre + chrX_15_3105001 chrX_3105001 RAL-426 2684 chrX 3243614 3243653 chrX 3243724 3243763 7 109 2.0 0.5 1.2 3.2 149 chrX 3243614 intron dnc + chrX 3243688 intron dnc + chrX 3243763 intron dnc + chrX_7_3240001 chrX_3240001 RAL-426 2685 chrX 3303926 3303936 chrX 3304024 3304034 5 98 2.0 7.0 4.5 0.9 108 chrX 3303926 intron dnc + chrX 3303980 intron dnc + chrX 3304034 intron dnc + chrX_5_3300001 chrX_3300001 RAL-426 2686 chrX 3359313 3359365 chrX 3359919 3359971 12 605 2.0 4.0 3.0 3.0 658 chrX 3359313 intergenic not near genes chrX 3359642 intergenic not near genes chrX 3359971 intergenic not near genes chrX_12_3355001 chrX_3355001 RAL-426 2687 chrX 3408979 3409017 chrX 3409076 3409093 15 95 0.0 6.0 3.0 3.8 114 chrX 3408979 intron,intron CR44999 +,CG12535 - chrX 3409036 intron,intron CR44999 +,CG12535 - chrX 3409093 intron,intron CR44999 +,CG12535 - chrX_15_3405001 chrX_3405001 RAL-426 2688 chrX 3415013 3415032 chrX 3421210 3421237 3S18 8 6204 6.5 4.0 5.2 1.3 6224 chrX 3415013 intron,intron CR44999 +,CG12535 - chrX 3418125 intron,intron CR44999 +,CG12535 - chrX 3421237 intron,intron CR44999 +,CG12535 - chrX_8_3415001 chrX_3415001 RAL-426 2689 chrX 3433411 3433434 chrX 3433520 3433543 7 108 3.5 7.5 5.5 1.1 132 chrX 3433411 intron,intron CR44999 +,CG12535 - chrX 3433477 intron,intron CR44999 +,CG12535 - chrX 3433543 intron,intron CR44999 +,CG12535 - chrX_7_3430001 chrX_3430001 RAL-426 2690 chrX 3493077 3493121 chrX 3502256 3502272 roo 10 9171 2.5 3.0 2.8 2.6 9195 chrX 3493077 intron,intron CR44999 +,Gas8 - chrX 3497674 intron,intron CR44999 +,Gas8 - chrX 3502272 intron,intron CR44999 +,Gas8 - chrX_10_3495001 chrX_3495001 RAL-426 2691 chrX 3597531 3597550 chrX 3619719 3619734 roo 8 22184 11.0 2.5 6.8 1.0 22203 chrX 3597531 intron AstA-R1 + chrX 3608632 intron AstA-R1 + chrX 3619734 intron AstA-R1 + chrX_8_3605001 chrX_3605001 RAL-426 2692 chrX 3597551 3597581 chrX 3619718 3619739 roo 11 22176 4.0 2.5 3.2 2.6 22188 chrX 3597551 intron AstA-R1 + chrX 3608645 intron AstA-R1 + chrX 3619739 intron AstA-R1 + chrX_11_3605001 chrX_3605001 RAL-426 2693 chrX 3629828 3629879 chrX 3629933 3629984 11 104 2.0 1.5 1.8 3.9 156 chrX 3629828 intron AstA-R1 + chrX 3629906 intron AstA-R1 + chrX 3629984 intron AstA-R1 + chrX_11_3625001 chrX_3625001 RAL-426 2694 chrX 3713107 3713135 chrX 3713234 3713262 5 128 4.0 4.5 4.2 1.0 155 chrX 3713107 intron Rala - chrX 3713184 intron Rala - chrX 3713262 intron Rala - chrX_5_3710001 chrX_3710001 RAL-426 2695 chrX 3726749 3726788 chrX 3730158 3730189 NOF 5 3411 2.0 0.0 1.0 2.5 3440 chrX 3726749 intron tlk + chrX 3728469 intron tlk + chrX 3730189 intron tlk + chrX_5_3725001 chrX_3725001 RAL-426 2696 chrX 3842335 3842349 chrX 3842573 3842587 pogo 5 238 2.0 3.0 2.5 1.4 252 chrX 3842335 intron ec + chrX 3842461 intron ec + chrX 3842587 intron ec + chrX_5_3840001 chrX_3840001 RAL-426 2697 chrX 3986858 3986894 chrX 3994494 3994547 412 16 7649 4.5 3.5 4.0 3.2 7689 chrX 3986858 intergenic not near genes chrX 3990702 intergenic not near genes chrX 3994547 intergenic not near genes chrX_16_3990001 chrX_3990001 RAL-426 2698 chrX 3994796 3994818 chrX 3994966 3994991 5 170 3.5 7.0 5.2 0.8 195 chrX 3994796 intergenic not near genes chrX 3994894 intergenic not near genes chrX 3994991 intergenic not near genes chrX_5_3990001 chrX_3990001 RAL-426 2699 chrX 4048492 4048523 chrX 4048588 4048618 10 96 2.0 3.0 2.5 2.9 126 chrX 4048492 3` UTR CR45482 - chrX 4048555 3` UTR CR45482 - chrX 4048618 3` UTR CR45482 - chrX_10_4045001 chrX_4045001 RAL-426 2700 chrX 4101847 4101890 chrX 4101946 4101990 9 98 1.0 1.0 1.0 4.5 143 chrX 4101847 exon CG15375 + chrX 4101918 exon CG15375 + chrX 4101990 exon CG15375 + chrX_9_4100001 chrX_4100001 RAL-426 2701 chrX 4157899 4157922 chrX 4164951 4164954 297 9 7060 3.5 2.5 3.0 2.2 7055 chrX 4157899 intron Fas2 - chrX 4161426 intron Fas2 - chrX 4164954 intron Fas2 - chrX_9_4160001 chrX_4160001 RAL-426 2702 chrX 4337906 4337922 chrX 4338049 4338059 4 142 5.0 3.0 4.0 0.8 153 chrX 4337906 intron norpA + chrX 4337982 intron norpA + chrX 4338059 intron norpA + chrX_4_4335001 chrX_4335001 RAL-426 2703 chrX 4396954 4397006 chrX 4397059 4397108 15 96 4.0 3.0 3.5 3.3 154 chrX 4396954 intron CR32773 - chrX 4397031 intron CR32773 - chrX 4397108 intron CR32773 - chrX_15_4395001 chrX_4395001 RAL-426 2704 chrX 4700380 4700423 chrX 4700743 4700783 jockey 8 361 2.0 4.0 3.0 2.0 403 chrX 4700380 3` UTR ctp + chrX 4700582 3` UTR ctp + chrX 4700783 3` UTR ctp + chrX_8_4700001 chrX_4700001 RAL-426 2705 chrX 4763242 4763277 chrX 4763750 4763785 Stalker4 9 500 3.0 1.0 2.0 3.0 543 chrX 4763242 intergenic not near genes chrX 4763514 intergenic not near genes chrX 4763785 intergenic not near genes chrX_9_4760001 chrX_4760001 RAL-426 2706 chrX 4792364 4792395 chrX 4792815 4792848 jockey 10 450 1.5 5.0 3.2 2.4 484 chrX 4792364 intergenic not near genes chrX 4792606 intergenic not near genes chrX 4792848 intergenic not near genes chrX_10_4790001 chrX_4790001 RAL-426 2707 chrX 4827962 4827999 chrX 4835343 4835390 Stalker4 13 7380 4.5 3.0 3.8 2.7 7428 chrX 4827962 intergenic not near genes chrX 4831676 intergenic not near genes chrX 4835390 intergenic not near genes chrX_13_4830001 chrX_4830001 RAL-426 2708 chrX 4871189 4871230 chrX 4871309 4871350 9 118 2.0 2.5 2.2 2.8 161 chrX 4871189 intron CG42594 + chrX 4871270 intron CG42594 + chrX 4871350 intron CG42594 + chrX_9_4870001 chrX_4870001 RAL-426 2709 chrX 4878858 4878908 chrX 4878987 4879037 6 129 1.5 0.0 0.8 3.3 179 chrX 4878858 intron CG42594 + chrX 4878948 intron CG42594 + chrX 4879037 intron CG42594 + chrX_6_4875001 chrX_4875001 RAL-426 2710 chrX 4967335 4967370 chrX 4967435 4967470 6 99 2.5 4.0 3.2 1.4 135 chrX 4967335 intron CR44833 - chrX 4967402 intron CR44833 - chrX 4967470 intron CR44833 - chrX_6_4965001 chrX_4965001 RAL-426 2711 chrX 4990023 4990074 chrX 4997256 4997308 roo 15 7229 1.5 3.5 2.5 4.3 7285 chrX 4990023 intron CR44833 - chrX 4993666 intron CR44833 - chrX 4997308 intron CR44833 - chrX_15_4990001 chrX_4990001 RAL-426 2712 chrX 5049560 5049601 chrX 5049667 5049709 10 108 5.0 3.5 4.2 1.9 149 chrX 5049560 intron,intron CR44833 -,ovo + chrX 5049634 intron,intron CR44833 -,ovo + chrX 5049709 intron,intron CR44833 -,ovo + chrX_10_5045001 chrX_5045001 RAL-426 2713 chrX 5096301 5096304 chrX 5103840 5103861 springer 4 7550 1.5 5.0 3.2 1.0 7560 chrX 5096301 intron,intron CG15465 +,rg + chrX 5100081 intron,intron CG15465 +,rg + chrX 5103861 intron,intron CG15465 +,rg + chrX_4_5100001 chrX_5100001 RAL-426 2714 chrX 5338694 5338721 chrX 5339967 5339989 jockey 4 1270 4.0 1.5 2.8 1.1 1295 chrX 5338694 intergenic not near genes chrX 5339342 intergenic not near genes chrX 5339989 intergenic SK + chrX_4_5335001 chrX_5335001 RAL-426 2715 chrX 5345378 5345430 chrX 5345509 5345561 6 131 1.0 3.5 2.2 1.9 183 chrX 5345378 intron SK + chrX 5345470 intron SK + chrX 5345561 intron SK + chrX_6_5345001 chrX_5345001 RAL-426 2716 chrX 5524832 5524855 chrX 5528713 5528738 412 4 3882 2.5 1.0 1.8 1.4 3906 chrX 5524832 intergenic snoRNA:Psi28S-3342 - chrX 5526785 intergenic not near genes chrX 5528738 intergenic Vsx2 - chrX_4_5525001 chrX_5525001 RAL-426 2717 chrX 5798854 5798892 chrX 5799030 5799074 6 174 0.5 6.0 3.2 1.4 220 chrX 5798854 intergenic not near genes chrX 5798964 intergenic not near genes chrX 5799074 intergenic not near genes chrX_6_5795001 chrX_5795001 RAL-426 2718 chrX 5883793 5883837 chrX 5884054 5884094 pogo 11 258 3.0 3.0 3.0 2.8 301 chrX 5883793 intron CR45668 - chrX 5883944 intron CR45668 - chrX 5884094 intron CR45668 - chrX_11_5880001 chrX_5880001 RAL-426 2719 chrX 5884152 5884183 chrX 5884411 5884436 pogo 7 259 5.5 5.0 5.2 1.1 284 chrX 5884152 intron CR45668 - chrX 5884294 intron CR45668 - chrX 5884436 intron CR45668 - chrX_7_5880001 chrX_5880001 RAL-426 2720 chrX 5884184 5884193 chrX 5884402 5884448 pogo 4 249 4.0 3.5 3.8 0.8 264 chrX 5884184 intron CR45668 - chrX 5884316 intron CR45668 - chrX 5884448 intron CR45668 - chrX_4_5880001 chrX_5880001 RAL-426 2721 chrX 6003272 6003312 chrX 6003365 6003412 11 96 0.0 4.0 2.0 3.7 140 chrX 6003272 intron CR44498 + chrX 6003342 intron CR44498 + chrX 6003412 intron CR44498 + chrX_11_6000001 chrX_6000001 RAL-426 2722 chrX 6171599 6171604 chrX 6179017 6179039 Quasimodo 4 7425 3.5 3.5 3.5 0.9 7440 chrX 6171599 intron Ca-alpha1T - chrX 6175319 intron Ca-alpha1T - chrX 6179039 intron Ca-alpha1T - chrX_4_6175001 chrX_6175001 RAL-426 2723 chrX 6215338 6215369 chrX 6215426 6215472 9 101 0.0 3.0 1.5 3.6 134 chrX 6215338 intergenic not near genes chrX 6215405 intergenic not near genes chrX 6215472 intergenic not near genes chrX_9_6215001 chrX_6215001 RAL-426 2724 chrX 6335213 6335242 chrX 6337720 6337771 Tirant 12 2522 0.0 2.5 1.2 5.5 2558 chrX 6335213 intergenic not near genes chrX 6336492 intergenic not near genes chrX 6337771 5` UTR CG3842 + chrX_12_6335001 chrX_6335001 RAL-426 2725 chrX 6392853 6392899 chrX 6397637 6397674 Doc 10 4780 4.5 4.0 4.2 1.9 4821 chrX 6392853 intergenic not near genes chrX 6395264 intergenic not near genes chrX 6397674 intergenic not near genes chrX_10_6395001 chrX_6395001 RAL-426 2726 chrX 6487968 6487982 chrX 6488068 6488084 4 101 6.5 9.0 7.8 0.5 116 chrX 6487968 intron CG42340 - chrX 6488026 intron CG42340 - chrX 6488084 intron CG42340 - chrX_4_6485001 chrX_6485001 RAL-426 2727 chrX 6515294 6515329 chrX 6515395 6515416 4 92 0.0 2.5 1.2 1.8 122 chrX 6515294 intron CG42340 - chrX 6515355 intron CG42340 - chrX 6515416 intron CG42340 - chrX_4_6515001 chrX_6515001 RAL-426 2728 chrX 6525963 6526023 chrX 6526071 6526079 8 92 3.0 2.0 2.5 2.3 116 chrX 6525963 3` UTR CG3918 + chrX 6526021 3` UTR CG3918 + chrX 6526079 3` UTR CG3918 + chrX_8_6525001 chrX_6525001 RAL-426 2729 chrX 6562823 6562851 chrX 6571307 6571334 Tirant 11 8485 5.5 2.5 4.0 2.2 8511 chrX 6562823 intron CG34417 + chrX 6567078 intron CG34417 + chrX 6571334 intron CG34417 + chrX_11_6565001 chrX_6565001 RAL-426 2730 chrX 6618451 6618471 chrX 6618549 6618568 4 91 6.5 10.5 8.5 0.4 117 chrX 6618451 intron pigs + chrX 6618510 intron pigs + chrX 6618568 intron pigs + chrX_4_6615001 chrX_6615001 RAL-426 2731 chrX 6737501 6737527 chrX 6737602 6737627 8 98 6.0 5.5 5.8 1.2 126 chrX 6737501 intron CG3168 - chrX 6737564 intron CG3168 - chrX 6737627 intron CG3168 - chrX_8_6735001 chrX_6735001 RAL-426 2732 chrX 6737529 6737548 chrX 6737600 6737612 6 82 4.5 5.5 5.0 1.0 83 chrX 6737529 intron CG3168 - chrX 6737570 intron CG3168 - chrX 6737612 intron CG3168 - chrX_6_6735001 chrX_6735001 RAL-426 2733 chrX 6792069 6792092 chrX 6792180 6792203 10 109 3.0 2.5 2.8 2.6 134 chrX 6792069 intron C3G - chrX 6792136 intron C3G - chrX 6792203 intron C3G - chrX_10_6790001 chrX_6790001 RAL-426 2734 chrX 6851877 6851898 chrX 6851979 6852006 5 106 3.0 2.5 2.8 1.3 129 chrX 6851877 3` UTR CG4558 + chrX 6851942 3` UTR CG14434 - chrX 6852006 3` UTR CG14434 - chrX_5_6850001 chrX_6850001 RAL-426 2735 chrX 6883743 6883756 chrX 6883841 6883850 5 108 2.0 6.0 4.0 1.0 107 chrX 6883743 intergenic not near genes chrX 6883796 intergenic not near genes chrX 6883850 intergenic not near genes chrX_5_6880001 chrX_6880001 RAL-426 2736 chrX 6897668 6897709 chrX 6897798 6897837 9 129 2.5 2.0 2.2 2.8 169 chrX 6897668 intergenic not near genes chrX 6897752 intergenic not near genes chrX 6897837 intergenic not near genes chrX_9_6895001 chrX_6895001 RAL-426 2737 chrX 6984606 6984649 chrX 6984702 6984746 6 92 1.5 1.0 1.2 2.7 140 chrX 6984606 intron ogre - chrX 6984676 intron ogre - chrX 6984746 intron ogre - chrX_6_6980001 chrX_6980001 RAL-426 2738 chrX 6988512 6988522 chrX 6988617 6988627 4 105 5.5 3.5 4.5 0.7 115 chrX 6988512 intron ogre - chrX 6988570 intron ogre - chrX 6988627 intron ogre - chrX_4_6985001 chrX_6985001 RAL-426 2739 chrX 6989491 6989533 chrX 6989597 6989640 7 104 2.5 5.5 4.0 1.4 149 chrX 6989491 intron ogre - chrX 6989566 intron ogre - chrX 6989640 intron ogre - chrX_7_6985001 chrX_6985001 RAL-426 2740 chrX 7023586 7023632 chrX 7030995 7031042 Tabor 15 7405 8.5 1.5 5.0 2.5 7456 chrX 7023586 intron CG12541 - chrX 7027314 intron CG12541 - chrX 7031042 intron CG12541 - chrX_15_7025001 chrX_7025001 RAL-426 2741 chrX 7125234 7125274 chrX 7134413 7134453 roo 12 9175 2.0 4.0 3.0 3.0 9219 chrX 7125234 intergenic not near genes chrX 7129844 intergenic not near genes chrX 7134453 intergenic not near genes chrX_12_7125001 chrX_7125001 RAL-426 2742 chrX 7270081 7270115 chrX 7270175 7270205 4 91 4.0 2.5 3.2 1.0 124 chrX 7270081 intron CR44357 - chrX 7270143 intron CR44357 - chrX 7270205 intron CR44357 - chrX_4_7270001 chrX_7270001 RAL-426 2743 chrX 7381144 7381190 chrX 7381247 7381290 9 97 0.5 1.5 1.0 4.5 146 chrX 7381144 intron,intron CR44357 -,CG1677 - chrX 7381217 intron,intron CR44357 -,CG1677 - chrX 7381290 intron,intron CR44357 -,CG1677 - chrX_9_7380001 chrX_7380001 RAL-426 2744 chrX 7702898 7702931 chrX 7703342 7703364 jockey 10 454 5.5 3.0 4.2 1.9 466 chrX 7702898 intron CHES-1-like - chrX 7703131 intron CHES-1-like - chrX 7703364 intron CHES-1-like - chrX_10_7700001 chrX_7700001 RAL-426 2745 chrX 7793218 7793254 chrX 7793317 7793340 10 95 4.0 2.0 3.0 2.5 122 chrX 7793218 intergenic not near genes chrX 7793279 intergenic not near genes chrX 7793340 intergenic not near genes chrX_10_7790001 chrX_7790001 RAL-426 2746 chrX 7960857 7960900 chrX 7960966 7961009 16 109 4.0 3.0 3.5 3.6 152 chrX 7960857 intron,5` UTR sws -,CR45620 + chrX 7960933 intron sws - chrX 7961009 intron sws - chrX_16_7960001 chrX_7960001 RAL-426 2747 chrX 8031409 8031451 chrX 8035738 8035779 Juan 12 4327 7.0 10.0 8.5 1.3 4370 chrX 8031409 intergenic not near genes chrX 8033594 intergenic not near genes chrX 8035779 3` UTR CG2233 - chrX_12_8030001 chrX_8030001 RAL-426 2748 chrX 8047012 8047034 chrX 8047106 8047117 4 92 6.0 0.5 3.2 1.0 105 chrX 8047012 intron fs(1)h - chrX 8047064 intron fs(1)h - chrX 8047117 intron fs(1)h - chrX_4_8045001 chrX_8045001 RAL-426 2749 chrX 8092287 8092315 chrX 8092392 8092420 9 105 0.5 4.0 2.2 2.8 133 chrX 8092287 intron Ubc-E2H - chrX 8092354 intron Ubc-E2H - chrX 8092420 intron Ubc-E2H - chrX_9_8090001 chrX_8090001 RAL-426 2750 chrX 8257887 8257889 chrX 8257983 8257990 4 100 3.5 7.5 5.5 0.6 103 chrX 8257887 intron CG1632 + chrX 8257938 intron CG1632 + chrX 8257990 intron CG1632 + chrX_4_8255001 chrX_8255001 RAL-426 2751 chrX 8506508 8506556 chrX 8506736 8506784 12 226 3.0 2.5 2.8 3.2 276 chrX 8506508 intron CG33181 + chrX 8506646 intron CG33181 + chrX 8506784 intron CG33181 + chrX_12_8505001 chrX_8505001 RAL-426 2752 chrX 8509104 8509149 chrX 8509201 8509236 6 95 0.5 5.0 2.8 1.6 132 chrX 8509104 intron CG33181 + chrX 8509170 intron CG33181 + chrX 8509236 intron CG33181 + chrX_6_8505001 chrX_8505001 RAL-426 2753 chrX 8553085 8553124 chrX 8553183 8553227 4 101 3.0 1.5 2.2 1.2 142 chrX 8553085 3` UTR Nrg + chrX 8553156 3` UTR Nrg + chrX 8553227 3` UTR Nrg + chrX_4_8550001 chrX_8550001 RAL-426 2754 chrX 8771250 8771259 chrX 8771306 8771357 6 90 3.0 6.0 4.5 1.1 107 chrX 8771250 intron Lim1 - chrX 8771304 intron Lim1 - chrX 8771357 intron Lim1 - chrX_6_8770001 chrX_8770001 RAL-426 2755 chrX 8772234 8772241 chrX 8772331 8772340 4 98 6.0 5.0 5.5 0.6 106 chrX 8772234 intron Lim1 - chrX 8772287 intron Lim1 - chrX 8772340 intron Lim1 - chrX_4_8770001 chrX_8770001 RAL-426 2756 chrX 8894081 8894128 chrX 8894202 8894246 8 119 4.0 2.5 3.2 1.9 165 chrX 8894081 intron Moe - chrX 8894164 intron Moe - chrX 8894246 intron Moe - chrX_8_8890001 chrX_8890001 RAL-426 2757 chrX 8922320 8922347 chrX 8922765 8922800 jockey 8 449 5.5 5.0 5.2 1.3 480 chrX 8922320 intron rdgA + chrX 8922560 intron rdgA + chrX 8922800 intron rdgA + chrX_8_8920001 chrX_8920001 RAL-426 2758 chrX 8922349 8922361 chrX 8922762 8922799 jockey 9 430 4.0 4.5 4.2 1.7 450 chrX 8922349 intron rdgA + chrX 8922574 intron rdgA + chrX 8922799 intron rdgA + chrX_9_8920001 chrX_8920001 RAL-426 2759 chrX 8927566 8927605 chrX 8929856 8929895 NOF 13 2289 5.0 5.5 5.2 2.1 2329 chrX 8927566 intron rdgA + chrX 8928730 intron rdgA + chrX 8929895 intron rdgA + chrX_13_8925001 chrX_8925001 RAL-426 2760 chrX 8948749 8948763 chrX 8956279 8956293 roo 4 7530 2.5 5.5 4.0 0.8 7544 chrX 8948749 intron rdgA + chrX 8952521 intron rdgA + chrX 8956293 intron rdgA + chrX_4_8950001 chrX_8950001 RAL-426 2761 chrX 8948775 8948783 chrX 8956272 8956313 roo 6 7524 2.0 4.5 3.2 1.4 7538 chrX 8948775 intron rdgA + chrX 8952544 intron rdgA + chrX 8956313 intron rdgA + chrX_6_8950001 chrX_8950001 RAL-426 2762 chrX 8971884 8971909 chrX 8971966 8971989 9 93 0.0 4.0 2.0 3.0 105 chrX 8971884 intron rdgA + chrX 8971936 intron rdgA + chrX 8971989 intron rdgA + chrX_9_8970001 chrX_8970001 RAL-426 2763 chrX 9152062 9152107 chrX 9152165 9152209 8 101 3.0 2.5 2.8 2.1 147 chrX 9152062 intergenic dalao +,His3.3B - chrX 9152136 intergenic dalao +,His3.3B - chrX 9152209 intergenic dalao +,His3.3B - chrX_8_9150001 chrX_9150001 RAL-426 2764 chrX 9218059 9218084 chrX 9218170 9218195 4 111 4.5 0.0 2.2 1.2 136 chrX 9218059 3` UTR t - chrX 9218127 3` UTR t - chrX 9218195 3` UTR t - chrX_4_9215001 chrX_9215001 RAL-426 2765 chrX 9508121 9508162 chrX 9509657 9509700 jockey 10 1536 0.5 1.0 0.8 5.6 1579 chrX 9508121 intron CG32700 - chrX 9508910 intron CG32700 - chrX 9509700 intron CG32700 - chrX_10_9505001 chrX_9505001 RAL-426 2766 chrX 9527946 9527950 chrX 9528004 9528045 5 81 4.0 2.5 3.2 1.2 99 chrX 9527946 intron CG32700 - chrX 9527996 intron CG32700 - chrX 9528045 intron CG32700 - chrX_5_9525001 chrX_9525001 RAL-426 2767 chrX 9575791 9575824 chrX 9576113 9576167 mdg3 8 321 3.5 9.0 6.2 1.1 376 chrX 9575791 intron,exon CG32699 -,CG42395 - chrX 9575979 intron,intron CG32699 -,CG42395 - chrX 9576167 intron,5` UTR CG32699 -,CG42395 - chrX_8_9575001 chrX_9575001 RAL-426 2768 chrX 9595344 9595371 chrX 9595448 9595462 7 99 4.0 2.5 3.2 1.7 118 chrX 9595344 5` UTR CR45543 + chrX 9595403 5` UTR CR45543 + chrX 9595462 5` UTR CR45543 + chrX_7_9595001 chrX_9595001 RAL-426 2769 chrX 9595373 9595384 chrX 9595441 9595481 8 88 2.5 1.5 2.0 2.7 108 chrX 9595373 5` UTR CR45543 + chrX 9595427 5` UTR CR45543 + chrX 9595481 intergenic CR45543 + chrX_8_9595001 chrX_9595001 RAL-426 2770 chrX 9664165 9664206 chrX 9664279 9664320 4 114 2.0 2.5 2.2 1.2 155 chrX 9664165 intergenic not near genes chrX 9664242 intergenic not near genes chrX 9664320 intergenic not near genes chrX_4_9660001 chrX_9660001 RAL-426 2771 chrX 9791861 9791885 chrX 9791978 9792002 5 112 4.0 6.0 5.0 0.8 141 chrX 9791861 intron CG32698 + chrX 9791932 intron CG32698 + chrX 9792002 intron CG32698 + chrX_5_9790001 chrX_9790001 RAL-426 2772 chrX 10138199 10138235 chrX 10145723 10145759 412 8 7524 3.5 8.0 5.8 1.2 7560 chrX 10138199 intron,intron RhoU +,CR44894 - chrX 10141979 intron,intron RhoU +,CR44894 - chrX 10145759 intron,intron RhoU +,CR44894 - chrX_8_10140001 chrX_10140001 RAL-426 2773 chrX 10216831 10216852 chrX 10216930 10216948 7 92 7.5 9.5 8.5 0.7 117 chrX 10216831 3` UTR l(1)G0230 + chrX 10216890 3` UTR l(1)G0230 + chrX 10216948 3` UTR l(1)G0230 + chrX_7_10215001 chrX_10215001 RAL-426 2774 chrX 10440683 10440700 chrX 10440782 10440799 5 97 10.0 7.0 8.5 0.5 116 chrX 10440683 intron CG32683 - chrX 10440741 intron CG32683 - chrX 10440799 intron CG32683 - chrX_5_10440001 chrX_10440001 RAL-426 2775 chrX 10550313 10550366 chrX 10550411 10550464 11 98 3.0 1.5 2.2 3.4 151 chrX 10550313 intron spri - chrX 10550388 intron spri - chrX 10550464 intron spri - chrX_11_10550001 chrX_10550001 RAL-426 2776 chrX 10550841 10550855 chrX 10552328 10552339 hobo 5 1486 6.0 3.0 4.5 0.9 1498 chrX 10550841 intron spri - chrX 10551590 intron spri - chrX 10552339 intron spri - chrX_5_10550001 chrX_10550001 RAL-426 2777 chrX 10685110 10685159 chrX 10685228 10685276 10 118 1.0 2.5 1.8 3.6 166 chrX 10685110 intron X11Lbeta + chrX 10685193 intron X11Lbeta + chrX 10685276 intron X11Lbeta + chrX_10_10685001 chrX_10685001 RAL-426 2778 chrX 10686033 10686080 chrX 10691189 10691236 roo 15 5155 4.5 4.0 4.2 2.9 5203 chrX 10686033 intron X11Lbeta + chrX 10688634 intron X11Lbeta + chrX 10691236 intron X11Lbeta + chrX_15_10685001 chrX_10685001 RAL-426 2779 chrX 10717523 10717571 chrX 10717632 10717680 22 105 5.5 6.0 5.8 3.2 157 chrX 10717523 intron CG32676 - chrX 10717602 intron CG32676 - chrX 10717680 intron CG32676 - chrX_22_10715001 chrX_10715001 RAL-426 2780 chrX 10719135 10719147 chrX 10719210 10719251 5 98 0.0 4.0 2.0 1.7 116 chrX 10719135 intron CG32676 - chrX 10719193 intron CG32676 - chrX 10719251 intron CG32676 - chrX_5_10715001 chrX_10715001 RAL-426 2781 chrX 10772662 10772692 chrX 10772764 10772783 Tirant 4 100 3.0 3.5 3.2 1.0 121 chrX 10772662 intron CG15211 + chrX 10772722 intron CG15211 + chrX 10772783 intron CG15211 + chrX_4_10770001 chrX_10770001 RAL-426 2782 chrX 10811854 10811897 chrX 10811966 10812003 9 110 3.5 1.5 2.5 2.6 149 chrX 10811854 intron Imp - chrX 10811928 intron Imp - chrX 10812003 intron Imp - chrX_9_10810001 chrX_10810001 RAL-426 2783 chrX 10933901 10933936 chrX 10934008 10934044 10 106 0.0 2.0 1.0 5.0 143 chrX 10933901 intron Myo10A + chrX 10933972 intron Myo10A + chrX 10934044 intron Myo10A + chrX_10_10930001 chrX_10930001 RAL-426 2784 chrX 10981298 10981330 chrX 10981411 10981444 5 111 1.0 2.5 1.8 1.8 146 chrX 10981298 intron CG42339 - chrX 10981371 intron CG42339 - chrX 10981444 intron CG42339 - chrX_5_10980001 chrX_10980001 RAL-426 2785 chrX 11069137 11069178 chrX 11069300 11069341 8 161 1.5 1.5 1.5 3.2 204 chrX 11069137 intergenic not near genes chrX 11069239 intergenic not near genes chrX 11069341 intergenic not near genes chrX_8_11065001 chrX_11065001 RAL-426 2786 chrX 11095980 11096023 chrX 11103102 11103145 HMS-Beagle 6 7122 1.0 1.0 1.0 3.0 7165 chrX 11095980 intergenic not near genes chrX 11099562 intergenic not near genes chrX 11103145 intron CG42249 + chrX_6_11095001 chrX_11095001 RAL-426 2787 chrX 11109417 11109417 chrX 12946233 12946234 6 1836817 4.5 13.5 9.0 0.6 1836817 chrX 11109417 intron Hsp60 + chrX 12027826 exon Usp7 - chrX 12946234 3` UTR fne + chrX_6_12025001 chrX_12025001 RAL-426 2788 chrX 11166742 11166787 chrX 11166843 11166886 8 98 1.5 6.0 3.8 1.7 144 chrX 11166742 intergenic not near genes chrX 11166814 intergenic not near genes chrX 11166886 intergenic not near genes chrX_8_11165001 chrX_11165001 RAL-426 2789 chrX 11184237 11184269 chrX 11189333 11189361 flea 7 5093 4.0 1.5 2.8 1.8 5124 chrX 11184237 intergenic not near genes chrX 11186799 intergenic not near genes chrX 11189361 intergenic not near genes chrX_7_11185001 chrX_11185001 RAL-426 2790 chrX 11191880 11191920 chrX 11191978 11191979 14 95 4.5 6.0 5.2 2.3 99 chrX 11191880 intergenic not near genes chrX 11191930 intergenic not near genes chrX 11191979 intergenic not near genes chrX_14_11190001 chrX_11190001 RAL-426 2791 chrX 11254149 11254203 chrX 11254280 11254334 16 129 4.0 3.0 3.5 3.6 185 chrX 11254149 intron CG44422 - chrX 11254242 intron CG44422 - chrX 11254334 intron CG44422 - chrX_16_11250001 chrX_11250001 RAL-426 2792 chrX 11268578 11268587 chrX 11270058 11270071 hopper2 6 1486 3.5 0.0 1.8 2.1 1493 chrX 11268578 intron CG44422 - chrX 11269324 intron CG44422 - chrX 11270071 intron CG44422 - chrX_6_11265001 chrX_11265001 RAL-426 2793 chrX 11287163 11287198 chrX 11287267 11287304 5 106 4.0 4.0 4.0 1.0 141 chrX 11287163 intron CG44422 - chrX 11287234 intron CG44422 - chrX 11287304 intron CG44422 - chrX_5_11285001 chrX_11285001 RAL-426 2794 chrX 11312056 11312092 chrX 11319409 11319417 Stalker2 9 7354 3.5 2.5 3.0 2.2 7361 chrX 11312056 intergenic not near genes chrX 11315736 intergenic not near genes chrX 11319417 intergenic not near genes chrX_9_11315001 chrX_11315001 RAL-426 2795 chrX 11409490 11409526 chrX 11409596 11409604 5 100 1.5 1.5 1.5 2.0 114 chrX 11409490 3` UTR dlg1 + chrX 11409547 3` UTR dlg1 + chrX 11409604 3` UTR dlg1 + chrX_5_11405001 chrX_11405001 RAL-426 2796 chrX 11535026 11535040 chrX 11541514 11541530 Burdock 4 6489 9.5 6.0 7.8 0.5 6504 chrX 11535026 intron Drak + chrX 11538278 intron Drak + chrX 11541530 intron Drak + chrX_4_11535001 chrX_11535001 RAL-426 2797 chrX 11554856 11554911 chrX 11555258 11555307 7 397 6.0 24.0 15.0 0.4 451 chrX 11554856 3` UTR Drak + chrX 11555082 3` UTR CG1572 - chrX 11555307 3` UTR CG1572 - chrX_7_11555001 chrX_11555001 RAL-426 2798 chrX 11633402 11633447 chrX 11640475 11640517 297 17 7073 4.0 5.0 4.5 3.1 7115 chrX 11633402 intron Ptp10D + chrX 11636960 intron Ptp10D + chrX 11640517 intron Ptp10D + chrX_17_11635001 chrX_11635001 RAL-426 2799 chrX 11645102 11645146 chrX 11648291 11648311 NOF 7 3183 1.0 2.0 1.5 2.8 3209 chrX 11645102 intron Ptp10D + chrX 11646706 intron Ptp10D + chrX 11648311 intron Ptp10D + chrX_7_11645001 chrX_11645001 RAL-426 2800 chrX 11799006 11799034 chrX 11799111 11799124 4 102 2.5 1.5 2.0 1.3 118 chrX 11799006 intron CkIIbeta + chrX 11799065 intron CkIIbeta + chrX 11799124 intron CkIIbeta + chrX_4_11795001 chrX_11795001 RAL-426 2801 chrX 11804657 11804684 chrX 11804781 11804808 6 124 1.0 2.5 1.8 2.1 151 chrX 11804657 intron Hsc70-3 - chrX 11804732 intron Hsc70-3 - chrX 11804808 intron Hsc70-3 - chrX_6_11800001 chrX_11800001 RAL-426 2802 chrX 11922356 11922380 chrX 11922496 11922530 7 150 2.5 1.0 1.8 2.5 174 chrX 11922356 exon Sclp - chrX 11922443 intron Sclp - chrX 11922530 intron Sclp - chrX_7_11920001 chrX_11920001 RAL-426 2803 chrX 12043826 12043860 chrX 12043935 12043967 8 107 2.0 4.5 3.2 1.9 141 chrX 12043826 5` UTR,5` UTR CR43960 +,Ten-a + chrX 12043896 5` UTR,5` UTR CR43960 +,Ten-a + chrX 12043967 5` UTR,5` UTR CR43960 +,Ten-a + chrX_8_12040001 chrX_12040001 RAL-426 2804 chrX 12168122 12168142 chrX 12173584 12173594 I-element 4 5458 4.0 2.0 3.0 1.0 5472 chrX 12168122 intron Ten-a + chrX 12170858 intron Ten-a + chrX 12173594 intron Ten-a + chrX_4_12170001 chrX_12170001 RAL-426 2805 chrX 12277175 12277216 chrX 12277286 12277328 9 109 3.5 4.0 3.8 1.9 153 chrX 12277175 intron Ten-a + chrX 12277252 intron Ten-a + chrX 12277328 intron Ten-a + chrX_9_12275001 chrX_12275001 RAL-426 2806 chrX 12350772 12350795 chrX 12350852 12350894 4 92 7.5 0.0 3.8 0.8 122 chrX 12350772 intergenic not near genes chrX 12350833 intergenic not near genes chrX 12350894 intergenic not near genes chrX_4_12350001 chrX_12350001 RAL-426 2807 chrX 12375470 12375504 chrX 12375588 12375600 13 113 1.0 4.5 2.8 3.4 130 chrX 12375470 intergenic Ir11a - chrX 12375535 intergenic Ir11a - chrX 12375600 exon Ir11a - chrX_13_12375001 chrX_12375001 RAL-426 2808 chrX 12419552 12419588 chrX 12419658 12419700 11 105 1.5 1.5 1.5 4.4 148 chrX 12419552 intergenic not near genes chrX 12419626 intergenic not near genes chrX 12419700 intergenic not near genes chrX_11_12415001 chrX_12415001 RAL-426 2809 chrX 12421214 12421501 chrX 12421319 12421597 5 101 0.5 4.5 2.5 1.4 383 chrX 12421214 intergenic not near genes chrX 12421406 intergenic not near genes chrX 12421597 intergenic not near genes chrX_5_12420001 chrX_12420001 RAL-426 2810 chrX 12430932 12430955 chrX 12431025 12431049 5 91 3.0 2.5 2.8 1.3 117 chrX 12430932 intergenic not near genes chrX 12430990 intergenic not near genes chrX 12431049 intergenic not near genes chrX_5_12430001 chrX_12430001 RAL-426 2811 chrX 12533771 12533823 chrX 12533868 12533895 8 90 0.0 3.5 1.8 2.9 124 chrX 12533771 intron CG43921 - chrX 12533833 intron CG43921 - chrX 12533895 intron CG43921 - chrX_8_12530001 chrX_12530001 RAL-426 2812 chrX 12557139 12557164 chrX 12557232 12557254 6 89 8.5 4.0 6.2 0.8 115 chrX 12557139 intron CG43921 - chrX 12557196 intron CG43921 - chrX 12557254 intron CG43921 - chrX_6_12555001 chrX_12555001 RAL-426 2813 chrX 12752259 12752306 chrX 12752366 12752413 16 104 2.5 4.0 3.2 3.8 154 chrX 12752259 5` UTR CR44619 + chrX 12752336 5` UTR CR44619 + chrX 12752413 5` UTR CR44619 + chrX_16_12750001 chrX_12750001 RAL-426 2814 chrX 12882146 12882168 chrX 12882239 12882252 4 91 1.5 3.0 2.2 1.2 106 chrX 12882146 intron Pde9 - chrX 12882199 intron Pde9 - chrX 12882252 intron Pde9 - chrX_4_12880001 chrX_12880001 RAL-426 2815 chrX 12912613 12912653 chrX 12912730 12912770 6 117 0.0 0.5 0.2 5.0 157 chrX 12912613 5` UTR CR45625 + chrX 12912692 5` UTR CR45625 + chrX 12912770 5` UTR CR45625 + chrX_6_12910001 chrX_12910001 RAL-426 2816 chrX 12977048 12977063 chrX 12977144 12977159 5 96 0.0 5.0 2.5 1.4 111 chrX 12977048 intergenic not near genes chrX 12977104 intergenic not near genes chrX 12977159 intergenic not near genes chrX_5_12975001 chrX_12975001 RAL-426 2817 chrX 13006561 13006596 chrX 13006663 13006673 5 100 3.0 5.5 4.2 1.0 112 chrX 13006561 intron rad + chrX 13006617 intron rad + chrX 13006673 intron rad + chrX_5_13005001 chrX_13005001 RAL-426 2818 chrX 13146579 13146612 chrX 13146687 13146718 7 108 3.0 4.5 3.8 1.5 139 chrX 13146579 intron CG32645 + chrX 13146648 intron CG32645 + chrX 13146718 intron CG32645 + chrX_7_13145001 chrX_13145001 RAL-426 2819 chrX 13262657 13262691 chrX 13262761 13262796 6 104 0.5 1.5 1.0 3.0 139 chrX 13262657 intergenic HDAC4 -,comt + chrX 13262726 3` UTR HDAC4 - chrX 13262796 3` UTR HDAC4 - chrX_6_13260001 chrX_13260001 RAL-426 2820 chrX 13278140 13278183 chrX 13278243 13278276 6 101 2.5 0.5 1.5 2.4 136 chrX 13278140 intron HDAC4 - chrX 13278208 intron HDAC4 - chrX 13278276 intron HDAC4 - chrX_6_13275001 chrX_13275001 RAL-426 2821 chrX 13354934 13354945 chrX 13355031 13355042 5 95 1.0 0.0 0.5 3.3 108 chrX 13354934 intergenic not near genes chrX 13354988 intergenic not near genes chrX 13355042 intergenic not near genes chrX_5_13350001 chrX_13350001 RAL-426 2822 chrX 13374819 13374836 chrX 13374917 13374936 4 98 6.0 1.0 3.5 0.9 117 chrX 13374819 intron CG1640 + chrX 13374878 intron CG1640 + chrX 13374936 intron CG1640 + chrX_4_13370001 chrX_13370001 RAL-426 2823 chrX 13374839 13374868 chrX 13374915 13374968 11 94 3.0 1.5 2.2 3.4 129 chrX 13374839 intron CG1640 + chrX 13374904 intron CG1640 + chrX 13374968 intron CG1640 + chrX_11_13370001 chrX_13370001 RAL-426 2824 chrX 13401466 13401514 chrX 13401837 13401886 jockey 6 372 3.5 1.5 2.5 1.7 420 chrX 13401466 intergenic CG1673 +,CG12725 - chrX 13401676 intergenic CG12725 -,CG1673 + chrX 13401886 3` UTR CG12725 - chrX_6_13400001 chrX_13400001 RAL-426 2825 chrX 13429448 13429489 chrX 13430616 13430629 jockey 12 1160 4.5 8.0 6.2 1.7 1181 chrX 13429448 intergenic not near genes chrX 13430038 intergenic not near genes chrX 13430629 intergenic not near genes chrX_12_13430001 chrX_13430001 RAL-426 2826 chrX 13463625 13463662 chrX 13469222 13469259 mdg3 9 5596 4.5 2.5 3.5 2.0 5634 chrX 13463625 intron Neto + chrX 13466442 intron Neto + chrX 13469259 intron Neto + chrX_9_13465001 chrX_13465001 RAL-426 2827 chrX 13791146 13791180 chrX 13791317 13791335 6 168 1.5 0.0 0.8 3.3 189 chrX 13791146 intron inaE + chrX 13791240 intron inaE + chrX 13791335 intron inaE + chrX_6_13790001 chrX_13790001 RAL-426 2828 chrX 13821451 13821475 chrX 13821548 13821572 5 94 4.0 2.5 3.2 1.2 121 chrX 13821451 intron Clic - chrX 13821512 intron Clic - chrX 13821572 intron Clic - chrX_5_13820001 chrX_13820001 RAL-426 2829 chrX 13894383 13894417 chrX 13894475 13894511 7 88 2.0 5.5 3.8 1.5 128 chrX 13894383 intron mamo - chrX 13894447 intron mamo - chrX 13894511 intron mamo - chrX_7_13890001 chrX_13890001 RAL-426 2830 chrX 13934275 13934317 chrX 13934378 13934420 5 103 4.0 3.0 3.5 1.1 145 chrX 13934275 intron mamo - chrX 13934348 intron mamo - chrX 13934420 intron mamo - chrX_5_13930001 chrX_13930001 RAL-426 2831 chrX 13935505 13935525 chrX 13935598 13935624 5 96 3.5 5.5 4.5 0.9 119 chrX 13935505 intron mamo - chrX 13935564 intron mamo - chrX 13935624 intron mamo - chrX_5_13935001 chrX_13935001 RAL-426 2832 chrX 13943272 13943302 chrX 13943383 13943410 5 110 0.0 4.0 2.0 1.7 138 chrX 13943272 intron mamo - chrX 13943341 intron mamo - chrX 13943410 intron mamo - chrX_5_13940001 chrX_13940001 RAL-426 2833 chrX 13057301 13057304 chrX 13966949 13966949 5 909646 14.5 10.5 12.5 0.4 909648 chrX 13057301 intron rad + chrX 13512125 intron Neto + chrX 13966949 intron mamo - chrX_5_13510001 chrX_13510001 RAL-426 2834 chrX 14064139 14064170 chrX 14064256 14064283 4 116 0.0 3.0 1.5 1.6 144 chrX 14064139 intergenic not near genes chrX 14064211 intergenic not near genes chrX 14064283 intergenic not near genes chrX_4_14060001 chrX_14060001 RAL-426 2835 chrX 14105006 14105050 chrX 14114177 14114192 roo 5 9159 5.5 4.5 5.0 0.8 9186 chrX 14105006 intergenic not near genes chrX 14109599 intergenic not near genes chrX 14114192 5` UTR CR44657 + chrX_5_14105001 chrX_14105001 RAL-426 2836 chrX 14131479 14131521 chrX 14131576 14131587 4 86 0.5 3.5 2.0 1.3 108 chrX 14131479 intergenic not near genes chrX 14131533 intergenic not near genes chrX 14131587 intergenic not near genes chrX_4_14130001 chrX_14130001 RAL-426 2837 chrX 14209443 14209482 chrX 14209554 14209592 8 110 7.5 4.0 5.8 1.2 149 chrX 14209443 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209518 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209592 intron,intron l(1)G0007 +,l(1)G0469 - chrX_8_14205001 chrX_14205001 RAL-426 2838 chrX 14381395 14381403 chrX 14381569 14381577 7 174 2.0 1.5 1.8 2.5 182 chrX 14381395 intron,3` UTR dpr8 +,betaNACtes4 + chrX 14381486 intron dpr8 + chrX 14381577 intron dpr8 + chrX_7_14380001 chrX_14380001 RAL-426 2839 chrX 14413597 14413633 chrX 14414003 14414041 7 403 1.0 1.5 1.2 3.2 444 chrX 14413597 intron dpr8 + chrX 14413819 intron dpr8 + chrX 14414041 intron dpr8 + chrX_7_14410001 chrX_14410001 RAL-426 2840 chrX 14484961 14484986 chrX 14485070 14485093 6 108 0.0 4.0 2.0 2.0 132 chrX 14484961 intergenic not near genes chrX 14485027 intergenic not near genes chrX 14485093 intergenic not near genes chrX_6_14485001 chrX_14485001 RAL-426 2841 chrX 14560254 14560300 chrX 14560357 14560397 15 101 0.5 2.5 1.5 6.0 143 chrX 14560254 intergenic not near genes chrX 14560326 intergenic not near genes chrX 14560397 intergenic not near genes chrX_15_14560001 chrX_14560001 RAL-426 2842 chrX 14572878 14572902 chrX 14572972 14572984 4 98 2.0 2.0 2.0 1.3 106 chrX 14572878 intergenic not near genes chrX 14572931 intergenic not near genes chrX 14572984 intergenic not near genes chrX_4_14570001 chrX_14570001 RAL-426 2843 chrX 14636449 14636462 chrX 14641910 14641923 I-element 6 5461 7.0 5.5 6.2 0.8 5474 chrX 14636449 intron NetA - chrX 14639186 intron NetA - chrX 14641923 intron NetA - chrX_6_14635001 chrX_14635001 RAL-426 2844 chrX 14636463 14636498 chrX 14641901 14641912 I-element 9 5441 2.5 4.5 3.5 2.0 5449 chrX 14636463 intron NetA - chrX 14639188 intron NetA - chrX 14641912 intron NetA - chrX_9_14635001 chrX_14635001 RAL-426 2845 chrX 14818743 14818796 chrX 14823966 14823987 copia 7 5214 3.5 3.5 3.5 1.6 5244 chrX 14818743 intron rut - chrX 14821365 intron rut - chrX 14823987 intron rut - chrX_7_14820001 chrX_14820001 RAL-426 2846 chrX 14936845 14936886 chrX 14946120 14946152 roo 7 9275 5.0 4.5 4.8 1.2 9307 chrX 14936845 intron pdgy - chrX 14941498 intron pdgy - chrX 14946152 intron pdgy - chrX_7_14940001 chrX_14940001 RAL-426 2847 chrX 14960379 14960415 chrX 14960540 14960572 7 160 0.5 3.0 1.8 2.5 193 chrX 14960379 intron eag + chrX 14960476 intron eag + chrX 14960572 intron eag + chrX_7_14960001 chrX_14960001 RAL-426 2848 chrX 14981724 14981731 chrX 14981823 14981830 4 99 3.0 2.0 2.5 1.1 106 chrX 14981724 intron eag + chrX 14981777 intron eag + chrX 14981830 intron eag + chrX_4_14980001 chrX_14980001 RAL-426 2849 chrX 14991765 14991803 chrX 14991859 14991901 13 96 5.5 8.5 7.0 1.6 136 chrX 14991765 intron eag + chrX 14991833 intron eag + chrX 14991901 intron eag + chrX_13_14990001 chrX_14990001 RAL-426 2850 chrX 15070295 15070358 chrX 15070411 15070454 5 110 0.5 1.5 1.0 2.5 159 chrX 15070295 3` UTR Lsd-2 - chrX 15070374 3` UTR Lsd-2 - chrX 15070454 3` UTR Lsd-2 - chrX_5_15070001 chrX_15070001 RAL-426 2851 chrX 15076774 15076799 chrX 15077388 15077413 S-element 4 612 0.5 2.0 1.2 1.8 639 chrX 15076774 intergenic not near genes chrX 15077094 intergenic CR44662 - chrX 15077413 intergenic CR44662 - chrX_4_15075001 chrX_15075001 RAL-426 2852 chrX 15237313 15237358 chrX 15240015 15240041 11 2699 21.5 20.0 20.8 0.5 2728 chrX 15237313 intergenic not near genes chrX 15238677 intergenic not near genes chrX 15240041 intergenic not near genes chrX_11_15235001 chrX_15235001 RAL-426 2853 chrX 15237327 15237343 chrX 15239138 15239153 5 1812 24.5 13.5 19.0 0.2 1826 chrX 15237327 intergenic not near genes chrX 15238240 intergenic not near genes chrX 15239153 intergenic not near genes chrX_5_15235001 chrX_15235001 RAL-426 2854 chrX 15239141 15239160 chrX 15240233 15240258 8 1094 12.5 39.5 26.0 0.3 1117 chrX 15239141 intergenic not near genes chrX 15239700 intergenic not near genes chrX 15240258 intergenic not near genes chrX_8_15235001 chrX_15235001 RAL-426 2855 chrX 15248246 15248293 chrX 15248342 15248380 4 94 1.0 3.5 2.2 1.2 134 chrX 15248246 intergenic not near genes chrX 15248313 intergenic not near genes chrX 15248380 intergenic not near genes chrX_4_15245001 chrX_15245001 RAL-426 2856 chrX 15413045 15413061 chrX 15417353 15417378 Juan 8 4314 6.0 1.5 3.8 1.7 4333 chrX 15413045 intron Cngl - chrX 15415212 intron Cngl - chrX 15417378 intron Cngl - chrX_8_15415001 chrX_15415001 RAL-426 2857 chrX 15455531 15455576 chrX 15455628 15455673 9 97 1.5 3.0 2.2 2.8 142 chrX 15455531 3` UTR CG11655 + chrX 15455602 3` UTR shtd - chrX 15455673 3` UTR shtd - chrX_9_15455001 chrX_15455001 RAL-426 2858 chrX 15565621 15565667 chrX 15565727 15565773 4 106 1.0 2.5 1.8 1.4 152 chrX 15565621 intergenic not near genes chrX 15565697 intergenic not near genes chrX 15565773 intergenic not near genes chrX_4_15565001 chrX_15565001 RAL-426 2859 chrX 15681379 15681427 chrX 15681476 15681512 11 96 1.5 1.0 1.2 5.0 133 chrX 15681379 intergenic not near genes chrX 15681446 intergenic not near genes chrX 15681512 intergenic not near genes chrX_11_15680001 chrX_15680001 RAL-426 2860 chrX 15726407 15726438 chrX 15726493 15726541 11 98 3.0 3.5 3.2 2.6 134 chrX 15726407 exon CG8184 + chrX 15726474 intron CG8184 + chrX 15726541 exon CG8184 + chrX_11_15725001 chrX_15725001 RAL-426 2861 chrX 15818754 15818804 chrX 15818850 15818892 11 90 4.0 3.5 3.8 2.3 138 chrX 15818754 intron sd + chrX 15818823 intron sd + chrX 15818892 intron sd + chrX_11_15815001 chrX_15815001 RAL-426 2862 chrX 16160277 16160302 chrX 16160373 16160398 7 95 3.5 1.0 2.2 2.2 121 chrX 16160277 intergenic not near genes chrX 16160338 intergenic not near genes chrX 16160398 intergenic not near genes chrX_7_16160001 chrX_16160001 RAL-426 2863 chrX 16222760 16222805 chrX 16231130 16231175 roo 10 8367 3.5 2.0 2.8 2.6 8415 chrX 16222760 intergenic not near genes chrX 16226968 intergenic not near genes chrX 16231175 intergenic not near genes chrX_10_16225001 chrX_16225001 RAL-426 2864 chrX 16295505 16295532 chrX 16295609 16295636 6 104 2.5 0.0 1.2 2.7 131 chrX 16295505 intron CG9911 - chrX 16295570 intron CG9911 - chrX 16295636 intron CG9911 - chrX_6_16295001 chrX_16295001 RAL-426 2865 chrX 16340656 16340698 chrX 16349833 16349874 roo 8 9177 2.0 4.5 3.2 1.9 9218 chrX 16340656 intergenic Dsp1 + chrX 16345265 intergenic not near genes chrX 16349874 intergenic sl + chrX_8_16345001 chrX_16345001 RAL-426 2866 chrX 16437596 16437633 chrX 16437703 16437741 4 107 2.0 0.0 1.0 2.0 145 chrX 16437596 3` UTR,3` UTR hang +,CG9947 - chrX 16437668 3` UTR,3` UTR hang +,CG9947 - chrX 16437741 3` UTR,3` UTR hang +,CG9947 - chrX_4_16435001 chrX_16435001 RAL-426 2867 chrX 16476580 16476617 chrX 16476666 16476672 8 79 5.0 2.5 3.8 1.7 92 chrX 16476580 intron para - chrX 16476626 intron para - chrX 16476672 intron para - chrX_8_16475001 chrX_16475001 RAL-426 2868 chrX 16492628 16492665 chrX 16498225 16498262 mdg3 8 5596 4.0 5.0 4.5 1.5 5634 chrX 16492628 intron para - chrX 16495445 intron para - chrX 16498262 intron para - chrX_8_16495001 chrX_16495001 RAL-426 2869 chrX 16529434 16529441 chrX 16529562 16529572 5 130 0.0 10.0 5.0 0.8 138 chrX 16529434 intron para - chrX 16529503 intron para - chrX 16529572 intron para - chrX_5_16525001 chrX_16525001 RAL-426 2870 chrX 16570862 16570890 chrX 16570954 16570985 10 95 5.5 2.5 4.0 2.0 123 chrX 16570862 intron CanA-14F - chrX 16570924 intron CanA-14F - chrX 16570985 intron CanA-14F - chrX_10_16570001 chrX_16570001 RAL-426 2871 chrX 16650913 16650950 chrX 16651006 16651025 5 90 2.5 0.5 1.5 2.0 112 chrX 16650913 intergenic CG32573 +,CG42512 + chrX 16650969 intergenic CG32573 +,CG42512 + chrX 16651025 intergenic CG32573 +,CG42512 + chrX_5_16650001 chrX_16650001 RAL-426 2872 chrX 16815358 16815383 chrX 16815454 16815479 7 94 1.0 1.0 1.0 3.5 121 chrX 16815358 intron CG4829 + chrX 16815418 intron CG4829 + chrX 16815479 intron CG4829 + chrX_7_16815001 chrX_16815001 RAL-426 2873 chrX 16821216 16821263 chrX 16821316 16821363 7 99 3.0 3.5 3.2 1.7 147 chrX 16821216 intron CG4829 + chrX 16821290 intron CG4829 + chrX 16821363 intron CG4829 + chrX_7_16820001 chrX_16820001 RAL-426 2874 chrX 16833192 16833211 chrX 16833297 16833315 8 105 3.0 1.0 2.0 2.7 123 chrX 16833192 intron CG13004 - chrX 16833254 intron CG13004 - chrX 16833315 intron CG13004 - chrX_8_16830001 chrX_16830001 RAL-426 2875 chrX 16870066 16870097 chrX 16870168 16870199 7 101 3.0 6.0 4.5 1.3 133 chrX 16870066 intron CG13003 - chrX 16870132 intron CG13003 - chrX 16870199 intron CG13003 - chrX_7_16870001 chrX_16870001 RAL-426 2876 chrX 16951327 16951350 chrX 16951411 16951411 8 82 3.0 4.0 3.5 1.8 84 chrX 16951327 exon RhoGAP15B + chrX 16951369 exon RhoGAP15B + chrX 16951411 exon RhoGAP15B + chrX_8_16950001 chrX_16950001 RAL-426 2877 chrX 1053117 1053123 chrX 16983076 16983076 9 15929957 20.5 20.0 20.2 0.4 15929959 chrX 1053117 intron CR44779 + chrX 9018096 intron,intron rdgA +,CR43836 - chrX 16983076 intron CG45002 - chrX_9_9015001 chrX_9015001 RAL-426 2878 chrX 16983076 16983076 chrX 19404963 19404965 6 2421888 19.5 5.0 12.2 0.5 2421889 chrX 16983076 intron CG45002 - chrX 18194020 intron Frq2 + chrX 19404965 intron kek5 + chrX_6_18190001 chrX_18190001 RAL-426 2879 chrX 1053117 1053120 chrX 16983077 16983077 7 15929958 21.0 19.5 20.2 0.3 15929960 chrX 1053117 intron CR44779 + chrX 9018097 intron,intron rdgA +,CR43836 - chrX 16983077 intron CG45002 - chrX_7_9015001 chrX_9015001 RAL-426 2880 chrX 17011956 17011989 chrX 17012059 17012062 7 98 2.0 6.5 4.2 1.3 106 chrX 17011956 intron CG45002 - chrX 17012009 intron CG45002 - chrX 17012062 intron CG45002 - chrX_7_17010001 chrX_17010001 RAL-426 2881 chrX 17057917 17057965 chrX 17058178 17058226 pogo 4 261 0.0 1.0 0.5 2.7 309 chrX 17057917 intron CG45002 - chrX 17058072 intron CG45002 - chrX 17058226 intron CG45002 - chrX_4_17055001 chrX_17055001 RAL-426 2882 chrX 17217676 17217702 chrX 17217754 17217797 10 94 3.0 4.0 3.5 2.2 121 chrX 17217676 intergenic CG5162 + chrX 17217736 intergenic CG5162 + chrX 17217797 intergenic CG5162 + chrX_10_17215001 chrX_17215001 RAL-426 2883 chrX 17221807 17221861 chrX 17221913 17221958 8 104 2.5 1.5 2.0 2.7 151 chrX 17221807 intron CG5172 + chrX 17221882 intron CG5172 + chrX 17221958 intron CG5172 + chrX_8_17220001 chrX_17220001 RAL-426 2884 chrX 17247925 17247934 chrX 17248026 17248035 5 101 0.0 6.5 3.2 1.2 110 chrX 17247925 intron f + chrX 17247980 intron f + chrX 17248035 intron f + chrX_5_17245001 chrX_17245001 RAL-426 2885 chrX 17290061 17290096 chrX 17290157 17290171 9 93 0.5 2.5 1.5 3.6 110 chrX 17290061 intron,intron CG5445 +,Fim - chrX 17290116 intron,intron CG5445 +,Fim - chrX 17290171 intron,intron CG5445 +,Fim - chrX_9_17290001 chrX_17290001 RAL-426 2886 chrX 17316362 17316388 chrX 17316466 17316479 6 102 1.5 0.0 0.8 3.3 117 chrX 17316362 intron B-H2 + chrX 17316420 intron B-H2 + chrX 17316479 intron B-H2 + chrX_6_17315001 chrX_17315001 RAL-426 2887 chrX 17352603 17352611 chrX 17352715 17352733 4 120 0.0 5.5 2.8 1.1 130 chrX 17352603 intergenic not near genes chrX 17352668 intergenic not near genes chrX 17352733 intergenic not near genes chrX_4_17350001 chrX_17350001 RAL-426 2888 chrX 17434411 17434445 chrX 17434524 17434558 5 113 3.5 0.0 1.8 1.8 147 chrX 17434411 intron CG12994 - chrX 17434484 intron CG12994 - chrX 17434558 intron CG12994 - chrX_5_17430001 chrX_17430001 RAL-426 2889 chrX 17546949 17546994 chrX 17547102 17547147 4 153 0.5 2.0 1.2 1.8 198 chrX 17546949 intron CG43658 - chrX 17547048 intron CG43658 - chrX 17547147 intron CG43658 - chrX_4_17545001 chrX_17545001 RAL-426 2890 chrX 17548263 17548289 chrX 17548461 17548472 4 191 2.5 1.5 2.0 1.3 209 chrX 17548263 intron CG43658 - chrX 17548368 intron CG43658 - chrX 17548472 intron CG43658 - chrX_4_17545001 chrX_17545001 RAL-426 2891 chrX 17586415 17586461 chrX 17586540 17586585 8 124 5.5 3.0 4.2 1.5 170 chrX 17586415 intron CG12991 + chrX 17586500 intron CG12991 + chrX 17586585 intron CG12991 + chrX_8_17585001 chrX_17585001 RAL-426 2892 chrX 17657073 17657119 chrX 17657170 17657215 8 99 1.5 1.5 1.5 3.2 142 chrX 17657073 intergenic IntS2 -,beta-Spec + chrX 17657144 intergenic beta-Spec +,IntS2 - chrX 17657215 intergenic beta-Spec +,IntS2 - chrX_8_17655001 chrX_17655001 RAL-426 2893 chrX 17782575 17782606 chrX 17782679 17782704 10 110 2.5 4.5 3.5 2.2 129 chrX 17782575 intergenic not near genes chrX 17782640 intergenic not near genes chrX 17782704 intergenic not near genes chrX_10_17780001 chrX_17780001 RAL-426 2894 chrX 17965714 17965738 chrX 17965811 17965835 8 96 1.5 0.0 0.8 4.4 121 chrX 17965714 intron Sh - chrX 17965774 intron Sh - chrX 17965835 intron Sh - chrX_8_17965001 chrX_17965001 RAL-426 2895 chrX 18078799 18078817 chrX 18080434 18080455 9 1636 27.5 35.5 31.5 0.3 1656 chrX 18078799 intergenic CG7536 -,Dhc16F + chrX 18079627 3` UTR CG7536 - chrX 18080455 exon CG7536 - chrX_9_18075001 chrX_18075001 RAL-426 2896 chrX 18183114 18183152 chrX 18183335 18183343 4 212 0.0 1.5 0.8 2.2 229 chrX 18183114 intron Frq2 + chrX 18183228 intron Frq2 + chrX 18183343 intron Frq2 + chrX_4_18180001 chrX_18180001 RAL-426 2897 chrX 18194070 18194100 chrX 18194611 18194634 BS 10 550 4.0 6.0 5.0 1.7 564 chrX 18194070 intron Frq2 + chrX 18194352 intron Frq2 + chrX 18194634 intron Frq2 + chrX_10_18190001 chrX_18190001 RAL-426 2898 chrX 18429484 18429518 chrX 18434812 18434849 Transpac 8 5330 2.0 3.5 2.8 2.1 5365 chrX 18429484 intergenic not near genes chrX 18432166 intergenic not near genes chrX 18434849 intergenic not near genes chrX_8_18430001 chrX_18430001 RAL-426 2899 chrX 18555362 18555408 chrX 18556902 18556949 transib2 7 1541 1.0 2.0 1.5 2.8 1587 chrX 18555362 intron Bx + chrX 18556156 intron Bx + chrX 18556949 intron Bx + chrX_7_18555001 chrX_18555001 RAL-426 2900 chrX 18558760 18558797 chrX 18558862 18558899 11 99 3.5 3.5 3.5 2.4 139 chrX 18558760 intron Bx + chrX 18558830 intron Bx + chrX 18558899 intron Bx + chrX_11_18555001 chrX_18555001 RAL-426 2901 chrX 12946234 12946235 chrX 18572525 18572525 4 5626290 14.0 8.5 11.2 0.3 5626291 chrX 12946234 3` UTR fne + chrX 15759380 intron Graf - chrX 18572525 intergenic not near genes chrX_4_15755001 chrX_15755001 RAL-426 2902 chrX 12946233 12946234 chrX 18572526 18572527 4 5626294 14.0 8.0 11.0 0.3 5626294 chrX 12946233 3` UTR fne + chrX 15759380 intron Graf - chrX 18572527 intergenic not near genes chrX_4_15755001 chrX_15755001 RAL-426 2903 chrX 18644998 18645036 chrX 18645116 18645152 6 117 6.5 3.0 4.8 1.0 154 chrX 18644998 intron Rip11 - chrX 18645075 intron Rip11 - chrX 18645152 intron Rip11 - chrX_6_18645001 chrX_18645001 RAL-426 2904 chrX 18698840 18698877 chrX 18698976 18699014 7 133 2.5 4.5 3.5 1.6 174 chrX 18698840 intergenic not near genes chrX 18698927 intergenic not near genes chrX 18699014 intergenic not near genes chrX_7_18695001 chrX_18695001 RAL-426 2905 chrX 18764466 18764516 chrX 18764571 18764612 12 103 3.5 3.0 3.2 2.9 146 chrX 18764466 intergenic CCKLR-17D3 - chrX 18764539 3` UTR CCKLR-17D3 - chrX 18764612 3` UTR CCKLR-17D3 - chrX_12_18760001 chrX_18760001 RAL-426 2906 chrX 18957053 18957088 chrX 18965734 18965771 roo 4 8682 6.0 1.5 3.8 0.8 8718 chrX 18957053 intron CG43759 + chrX 18961412 intron CG43759 + chrX 18965771 intron CG43759 + chrX_4_18960001 chrX_18960001 RAL-426 2907 chrX 19060391 19060437 chrX 19065195 19065240 Doc 8 4804 4.0 4.5 4.2 1.5 4849 chrX 19060391 intron CG14190 + chrX 19062816 intron CG14190 + chrX 19065240 intron CG14190 + chrX_8_19060001 chrX_19060001 RAL-426 2908 chrX 19084076 19084339 chrX 19084216 19084221 4 134 6.0 0.5 3.2 1.0 145 chrX 19084076 intergenic CR45503 + chrX 19084148 intergenic CR45503 + chrX 19084221 intergenic CR45503 + chrX_4_19080001 chrX_19080001 RAL-426 2909 chrX 19098745 19098782 chrX 19098837 19098879 7 97 1.0 1.5 1.2 3.2 134 chrX 19098745 intergenic not near genes chrX 19098812 intergenic not near genes chrX 19098879 intergenic not near genes chrX_7_19095001 chrX_19095001 RAL-426 2910 chrX 19119697 19119848 chrX 19119800 19119946 4 103 0.5 0.5 0.5 2.7 249 chrX 19119697 intergenic not near genes chrX 19119822 intergenic not near genes chrX 19119946 intergenic not near genes chrX_4_19115001 chrX_19115001 RAL-426 2911 chrX 19124425 19124438 chrX 19124532 19124546 4 108 2.5 2.0 2.2 1.2 121 chrX 19124425 intergenic CG15882 - chrX 19124486 intergenic CG15882 - chrX 19124546 intergenic CG15882 -,tgy - chrX_4_19120001 chrX_19120001 RAL-426 2912 chrX 19125687 19125719 chrX 19125824 19125868 11 147 5.0 5.0 5.0 1.8 181 chrX 19125687 intron tgy - chrX 19125778 intron tgy - chrX 19125868 intron tgy - chrX_11_19125001 chrX_19125001 RAL-426 2913 chrX 19136535 19136584 chrX 19143475 19143494 412 11 6931 1.0 0.5 0.8 6.1 6959 chrX 19136535 intergenic not near genes chrX 19140014 intergenic not near genes chrX 19143494 3` UTR RhoGAP18B - chrX_11_19140001 chrX_19140001 RAL-426 2914 chrX 19380149 19380178 chrX 19380409 19380439 pogo 4 260 4.5 2.5 3.5 0.9 290 chrX 19380149 intron kek5 + chrX 19380294 intron kek5 + chrX 19380439 intron kek5 + chrX_4_19380001 chrX_19380001 RAL-426 2915 chrX 16983076 16983077 chrX 19404965 19404965 4 2421888 19.5 5.5 12.5 0.3 2421889 chrX 16983076 intron CG45002 - chrX 18194020 intron Frq2 + chrX 19404965 intron kek5 + chrX_4_18190001 chrX_18190001 RAL-426 2916 chrX 19472101 19472160 chrX 19472691 19472705 jockey 13 572 3.0 4.5 3.8 2.7 604 chrX 19472101 intergenic kek5 + chrX 19472403 intergenic kek5 + chrX 19472705 intergenic not near genes chrX_13_19470001 chrX_19470001 RAL-426 2917 chrX 19500724 19500743 chrX 19500826 19500847 9 106 3.0 5.0 4.0 1.8 123 chrX 19500724 intron,intron CG14200 +,Pfrx + chrX 19500786 intron,intron CG14200 +,Pfrx + chrX 19500847 intron,intron CG14200 +,Pfrx + chrX_9_19500001 chrX_19500001 RAL-426 2918 chrX 19593941 19593975 chrX 19594032 19594069 5 100 5.0 2.5 3.8 1.0 128 chrX 19593941 exon CG14205 + chrX 19594005 intron CG14205 + chrX 19594069 intron CG14205 + chrX_5_19590001 chrX_19590001 RAL-426 2919 chrX 19595717 19595741 chrX 19595826 19595833 5 106 2.0 2.0 2.0 1.7 116 chrX 19595717 intergenic CG14205 + chrX 19595775 intergenic CG14205 + chrX 19595833 intergenic CG14205 + chrX_5_19595001 chrX_19595001 RAL-426 2920 chrX 19662024 19662057 chrX 19662253 19662291 10 234 3.0 3.0 3.0 2.5 267 chrX 19662024 intron CG14223 - chrX 19662158 intron CG14223 - chrX 19662291 intron CG14223 - chrX_10_19660001 chrX_19660001 RAL-426 2921 chrX 19838490 19838525 chrX 19838583 19838621 6 94 5.0 2.5 3.8 1.2 131 chrX 19838490 intron pico - chrX 19838556 intron pico - chrX 19838621 intron pico - chrX_6_19835001 chrX_19835001 RAL-426 2922 chrX 19881441 19881479 chrX 19881539 19881575 9 99 3.0 3.5 3.2 2.1 134 chrX 19881441 intron Hers + chrX 19881508 intron Hers + chrX 19881575 intron Hers + chrX_9_19880001 chrX_19880001 RAL-426 2923 chrX 19983855 19983895 chrX 19983943 19983995 6 88 1.5 0.5 1.0 3.0 140 chrX 19983855 intergenic not near genes chrX 19983925 intergenic not near genes chrX 19983995 intergenic not near genes chrX_6_19980001 chrX_19980001 RAL-426 2924 chrX 19984375 19984410 chrX 19984676 19984711 8 297 0.0 3.5 1.8 2.9 336 chrX 19984375 intergenic not near genes chrX 19984543 intergenic not near genes chrX 19984711 intergenic not near genes chrX_8_19980001 chrX_19980001 RAL-426 2925 chrX 20125377 20125386 chrX 20125478 20125488 4 101 4.0 4.0 4.0 0.8 111 chrX 20125377 intergenic CG34331 + chrX 20125432 intergenic CG34331 + chrX 20125488 intergenic CG34331 + chrX_4_20125001 chrX_20125001 RAL-426 2926 chrX 20257737 20257772 chrX 20257843 20257878 7 102 2.0 1.0 1.5 2.8 141 chrX 20257737 intergenic not near genes chrX 20257808 intergenic not near genes chrX 20257878 intergenic not near genes chrX_7_20255001 chrX_20255001 RAL-426 2927 chrX 20271492 20271520 chrX 20271596 20271632 9 111 3.5 0.0 1.8 3.2 140 chrX 20271492 intergenic not near genes chrX 20271562 intergenic not near genes chrX 20271632 intergenic not near genes chrX_9_20270001 chrX_20270001 RAL-426 2928 chrX 20312864 20312910 chrX 20312962 20313008 11 95 3.0 3.0 3.0 2.8 144 chrX 20312864 intron CG1504 - chrX 20312936 intron CG1504 - chrX 20313008 intron CG1504 - chrX_11_20310001 chrX_20310001 RAL-426 2929 chrX 20320280 20320302 chrX 20320377 20320399 9 96 4.5 2.5 3.5 2.0 119 chrX 20320280 intron CG1504 - chrX 20320340 intron CG1504 - chrX 20320399 intron CG1504 - chrX_9_20320001 chrX_20320001 RAL-426 2930 chrX 20362852 20362880 chrX 20362949 20362959 8 94 1.0 0.0 0.5 5.3 107 chrX 20362852 intergenic not near genes chrX 20362906 intergenic not near genes chrX 20362959 intergenic not near genes chrX_8_20360001 chrX_20360001 RAL-426 2931 chrX 20374080 20374128 chrX 20374171 20374203 10 83 1.5 3.5 2.5 2.9 123 chrX 20374080 intergenic not near genes chrX 20374142 intergenic not near genes chrX 20374203 intergenic not near genes chrX_10_20370001 chrX_20370001 RAL-426 2932 chrX 20377329 20377346 chrX 20378814 20378815 hobo 6 1482 4.5 4.0 4.2 1.2 1486 chrX 20377329 intergenic not near genes chrX 20378072 intergenic not near genes chrX 20378815 intergenic not near genes chrX_6_20375001 chrX_20375001 RAL-426 2933 chrX 20443161 20443199 chrX 20443256 20443295 4 94 3.5 1.5 2.5 1.1 134 chrX 20443161 exon CG1695 + chrX 20443228 intron CG1695 + chrX 20443295 intron CG1695 + chrX_4_20440001 chrX_20440001 RAL-426 2934 chrX 20468003 20468014 chrX 20468110 20468123 5 107 3.0 0.0 1.5 2.0 120 chrX 20468003 intron GstT3 + chrX 20468063 intron GstT3 + chrX 20468123 intron GstT3 + chrX_5_20465001 chrX_20465001 RAL-426 2935 chrX 20468015 20468037 chrX 20468108 20468131 7 102 0.5 0.0 0.2 5.8 116 chrX 20468015 intron GstT3 + chrX 20468073 intron GstT3 + chrX 20468131 intron GstT3 + chrX_7_20465001 chrX_20465001 RAL-426 2936 chrX 20485584 20485624 chrX 20485830 20485864 7 241 4.0 3.0 3.5 1.6 280 chrX 20485584 intron RhoGAP19D - chrX 20485724 intron RhoGAP19D - chrX 20485864 intron RhoGAP19D - chrX_7_20485001 chrX_20485001 RAL-426 2937 chrX 20499143 20499188 chrX 20499237 20499291 16 96 2.0 4.0 3.0 4.0 148 chrX 20499143 intron RhoGAP19D - chrX 20499217 intron RhoGAP19D - chrX 20499291 intron RhoGAP19D - chrX_16_20495001 chrX_20495001 RAL-426 2938 chrX 20526457 20526712 chrX 20526593 20526810 14 110 0.5 0.5 0.5 9.3 353 chrX 20526457 intergenic not near genes chrX 20526634 intergenic not near genes chrX 20526810 intergenic not near genes chrX_14_20525001 chrX_20525001 RAL-426 2939 chrX 20528584 20528629 chrX 20528948 20528997 10 366 2.5 2.5 2.5 2.9 413 chrX 20528584 intergenic not near genes chrX 20528790 intergenic not near genes chrX 20528997 intergenic not near genes chrX_10_20525001 chrX_20525001 RAL-426 2940 chrX 20531744 20531793 chrX 20531863 20531912 9 118 1.5 3.5 2.5 2.6 168 chrX 20531744 intergenic not near genes chrX 20531828 intergenic not near genes chrX 20531912 intergenic not near genes chrX_9_20530001 chrX_20530001 RAL-426 2941 chrX 20575145 20575182 chrX 20575240 20575280 5 94 4.5 2.0 3.2 1.2 135 chrX 20575145 intergenic CG42580 + chrX 20575212 intergenic not near genes chrX 20575280 intergenic not near genes chrX_5_20575001 chrX_20575001 RAL-426 2942 chrX 20578062 20578106 chrX 20578161 20578204 7 97 3.5 3.0 3.2 1.7 142 chrX 20578062 intergenic not near genes chrX 20578133 intergenic not near genes chrX 20578204 intergenic not near genes chrX_7_20575001 chrX_20575001 RAL-426 2943 chrX 20634697 20634741 chrX 20634809 20634854 7 112 4.5 2.0 3.2 1.7 157 chrX 20634697 intergenic not near genes chrX 20634776 intergenic not near genes chrX 20634854 intergenic not near genes chrX_7_20630001 chrX_20630001 RAL-426 2944 chrX 20635414 20635436 chrX 20635600 20635606 9 181 2.5 1.0 1.8 3.2 192 chrX 20635414 intergenic not near genes chrX 20635510 intergenic not near genes chrX 20635606 intergenic not near genes chrX_9_20635001 chrX_20635001 RAL-426 2945 chrX 20710417 20710432 chrX 20710514 20710529 4 96 3.0 3.5 3.2 1.0 112 chrX 20710417 intergenic not near genes chrX 20710473 intergenic not near genes chrX 20710529 intergenic not near genes chrX_4_20710001 chrX_20710001 RAL-426 2946 chrX 20741565 20741589 chrX 20741657 20741684 8 94 2.5 0.0 1.2 3.6 119 chrX 20741565 intergenic not near genes chrX 20741624 intergenic not near genes chrX 20741684 intergenic not near genes chrX_8_20740001 chrX_20740001 RAL-426 2947 chrX 20836052 20836067 chrX 20836137 20836170 4 97 4.5 4.0 4.2 0.8 118 chrX 20836052 intron shakB - chrX 20836111 intron shakB - chrX 20836170 intron shakB - chrX_4_20835001 chrX_20835001 RAL-426 2948 chrX 20836723 20836758 chrX 20844330 20844379 roo 9 7619 2.5 2.0 2.2 2.8 7656 chrX 20836723 intron shakB - chrX 20840551 intron shakB - chrX 20844379 intron shakB - chrX_9_20840001 chrX_20840001 RAL-426 2949 chrX 20940703 20940729 chrX 20942192 20942217 hobo 10 1488 8.0 2.0 5.0 1.7 1514 chrX 20940703 intergenic not near genes chrX 20941460 intergenic not near genes chrX 20942217 intergenic not near genes chrX_10_20940001 chrX_20940001 RAL-426 2950 chrX 20940737 20940746 chrX 20942189 20942230 hobo 4 1478 8.5 2.0 5.2 0.6 1493 chrX 20940737 intergenic not near genes chrX 20941484 intergenic not near genes chrX 20942230 intergenic not near genes chrX_4_20940001 chrX_20940001 RAL-426 2951 chrX 20947662 20947695 chrX 20948513 20948547 6 858 0.0 3.0 1.5 2.4 885 chrX 20947662 intergenic not near genes chrX 20948104 intergenic not near genes chrX 20948547 intergenic not near genes chrX_6_20945001 chrX_20945001 RAL-426 2952 chrX 20974181 20974205 chrX 20974385 20974409 5 204 1.5 2.0 1.8 1.8 228 chrX 20974181 intergenic not near genes chrX 20974295 intergenic not near genes chrX 20974409 intergenic not near genes chrX_5_20970001 chrX_20970001 RAL-426 2953 chrX 20981012 20981040 chrX 20981135 20981163 5 121 3.5 1.5 2.5 1.4 151 chrX 20981012 intergenic not near genes chrX 20981088 intergenic not near genes chrX 20981163 intergenic not near genes chrX_5_20980001 chrX_20980001 RAL-426 2954 chrX 21040453 21040459 chrX 21045369 21045403 8 4914 21.5 33.0 27.2 0.3 4950 chrX 21040453 3` UTR,5` UTR Ntf-2 +,CG15449 - chrX 21042928 intron Mgstl + chrX 21045403 intron Cbs + chrX_8_21040001 chrX_21040001 RAL-426 2955 chrX 21086114 21086163 chrX 21087163 21087189 jockey 17 1045 6.5 4.0 5.2 2.7 1075 chrX 21086114 intergenic not near genes chrX 21086652 intergenic not near genes chrX 21087189 intergenic not near genes chrX_17_21085001 chrX_21085001 RAL-426 2956 chrX 21088025 21088073 chrX 21088177 21088225 5 143 2.0 0.5 1.2 2.3 200 chrX 21088025 intergenic not near genes chrX 21088125 intergenic not near genes chrX 21088225 intergenic not near genes chrX_5_21085001 chrX_21085001 RAL-426 2957 chrX 21118046 21118088 chrX 21118162 21118204 5 116 0.5 0.0 0.2 4.2 158 chrX 21118046 intron CG15445 + chrX 21118125 intron CG15445 + chrX 21118204 intron CG15445 + chrX_5_21115001 chrX_21115001 RAL-426 2958 chrX 21136616 21136663 chrX 21136726 21136773 15 109 4.5 5.5 5.0 2.5 157 chrX 21136616 exon CG34120 + chrX 21136694 intron CG34120 + chrX 21136773 intron CG34120 + chrX_15_21135001 chrX_21135001 RAL-426 2959 chrX 21166123 21166167 chrX 21166221 21166268 7 98 1.5 3.5 2.5 2.0 145 chrX 21166123 intergenic not near genes chrX 21166196 intergenic not near genes chrX 21166268 intergenic not near genes chrX_7_21165001 chrX_21165001 RAL-426 2960 chrX 21197036 21197090 chrX 21197134 21197165 21 88 2.5 3.5 3.0 5.2 129 chrX 21197036 intergenic not near genes chrX 21197100 intergenic not near genes chrX 21197165 intergenic not near genes chrX_21_21195001 chrX_21195001 RAL-426 2961 chrX 21328110 21328148 chrX 21328241 21328265 5 128 0.5 2.5 1.5 2.0 155 chrX 21328110 3` UTR CG1486 + chrX 21328188 intergenic CG1486 +,tty - chrX 21328265 intergenic CG1486 +,tty - chrX_5_21325001 chrX_21325001 RAL-426 2962 chrX 21334329 21334345 chrX 21334454 21334470 8 124 8.0 2.5 5.2 1.3 141 chrX 21334329 intron tty - chrX 21334400 intron tty - chrX 21334470 intron tty - chrX_8_21330001 chrX_21330001 RAL-426 2963 chrX 21428334 21428365 chrX 21428526 21428575 11 191 4.0 2.0 3.0 2.8 241 chrX 21428334 intron CG42343 - chrX 21428454 intron CG42343 - chrX 21428575 intron CG42343 - chrX_11_21425001 chrX_21425001 RAL-426 2964 chrX 21440488 21440538 chrX 21440637 21440684 9 141 0.5 0.5 0.5 6.0 196 chrX 21440488 intron CG42343 - chrX 21440586 intron CG42343 - chrX 21440684 intron CG42343 - chrX_9_21440001 chrX_21440001 RAL-426 2965 chrX 21447052 21447068 chrX 21447211 21447211 4 155 4.5 1.5 3.0 1.0 159 chrX 21447052 intron CG42343 - chrX 21447132 intron CG42343 - chrX 21447211 intron CG42343 - chrX_4_21445001 chrX_21445001 RAL-426 2966 chrX 21458679 21458718 chrX 21464135 21464174 Ivk 14 5454 6.0 7.5 6.8 1.8 5495 chrX 21458679 intergenic not near genes chrX 21461426 intergenic not near genes chrX 21464174 intergenic not near genes chrX_14_21460001 chrX_21460001 RAL-426 2967 chrX 21668246 21668290 chrX 21668341 21668394 12 102 20.0 17.0 18.5 0.6 148 chrX 21668246 intergenic not near genes chrX 21668320 intergenic not near genes chrX 21668394 intergenic not near genes chrX_12_21665001 chrX_21665001 RAL-426 2968 chrX 22478870 22478898 chrX 22479023 22479051 5 153 0.0 3.5 1.8 1.8 181 chrX 22478870 intron CG12576 - chrX 22478960 intron CG12576 - chrX 22479051 intron CG12576 - chrX_5_22475001 chrX_22475001 RAL-426 2969 chrX 22522618 22522645 chrX 22525458 22525469 NOF 4 2834 4.0 2.0 3.0 1.0 2851 chrX 22522618 intron CG17600 + chrX 22524044 intron CG17600 + chrX 22525469 intron CG17600 + chrX_4_22520001 chrX_22520001 RAL-426 2970 chrX 22564562 22564585 chrX 22575114 22575139 jockey 8 10553 11.5 7.5 9.5 0.8 10577 chrX 22564562 intergenic not near genes chrX 22569850 intergenic not near genes chrX 22575139 intergenic not near genes chrX_8_22565001 chrX_22565001 RAL-426 2971 chrX 22585504 22585536 chrX 22585607 22585640 5 103 2.5 3.5 3.0 1.2 136 chrX 22585504 intron Cda4 - chrX 22585572 intron Cda4 - chrX 22585640 intron Cda4 - chrX_5_22585001 chrX_22585001 RAL-426 2972 chrX 22646510 22646525 chrX 22646631 22646646 6 120 3.5 0.0 1.8 2.1 136 chrX 22646510 intergenic not near genes chrX 22646578 intergenic not near genes chrX 22646646 intergenic not near genes chrX_6_22645001 chrX_22645001 RAL-426 2973 chrX 22677273 22677320 chrX 22677502 22677519 8 223 4.5 3.0 3.8 1.7 246 chrX 22677273 intron CR44997 + chrX 22677396 intron CR44997 + chrX 22677519 intron CR44997 + chrX_8_22675001 chrX_22675001 RAL-426 2974 chrX 22694312 22694351 chrX 22694421 22694461 4 110 2.0 1.0 1.5 1.6 149 chrX 22694312 intron CR44997 + chrX 22694386 intron CR44997 + chrX 22694461 intron CR44997 + chrX_4_22690001 chrX_22690001 RAL-426 2975 chrX 22697480 22697512 chrX 22701797 22701829 Juan 5 4317 3.0 5.5 4.2 1.0 4349 chrX 22697480 intron CR44997 + chrX 22699654 intron CR44997 + chrX 22701829 intron CR44997 + chrX_5_22695001 chrX_22695001 RAL-426 2976 chrX 22764365 22764396 chrX 22764481 22764512 5 116 0.5 2.0 1.2 2.3 147 chrX 22764365 intron CR44997 + chrX 22764438 intron CR44997 + chrX 22764512 intron CR44997 + chrX_5_22760001 chrX_22760001 RAL-426 2977 chrX 22784047 22784054 chrX 22784163 22784170 4 116 1.0 2.5 1.8 1.4 123 chrX 22784047 intron CR44997 + chrX 22784108 intron CR44997 + chrX 22784170 intron CR44997 + chrX_4_22780001 chrX_22780001 RAL-426 2978 chrX 22798772 22798795 chrX 22798890 22798932 5 133 3.0 3.0 3.0 1.2 160 chrX 22798772 intergenic not near genes chrX 22798852 intergenic not near genes chrX 22798932 intergenic not near genes chrX_5_22795001 chrX_22795001 RAL-426 2979 chrX 22824227 22824446 chrX 22824361 22824599 8 142 0.5 0.5 0.5 5.3 372 chrX 22824227 intergenic fog - chrX 22824413 3` UTR fog - chrX 22824599 3` UTR fog - chrX_8_22820001 chrX_22820001 RAL-426 2980 chrX 22854518 22854545 chrX 22854613 22854655 5 107 4.5 4.0 4.2 1.0 137 chrX 22854518 intron,intron fog -,CG42346 + chrX 22854586 intron,intron fog -,CG42346 + chrX 22854655 intron,intron fog -,CG42346 + chrX_5_22850001 chrX_22850001 RAL-426 2981 chrX 22895733 22895759 chrX 22895847 22895875 4 126 1.5 3.0 2.2 1.2 142 chrX 22895733 intergenic not near genes chrX 22895804 intergenic not near genes chrX 22895875 intergenic not near genes chrX_4_22895001 chrX_22895001 RAL-426 2982 chrX 22987105 22987136 chrX 22989784 22989797 Burdock 6 2676 4.5 5.5 5.0 1.0 2692 chrX 22987105 intron,intron stnA -,stnB - chrX 22988451 intron,intron stnA -,stnB - chrX 22989797 intron,intron stnA -,stnB - chrX_6_22985001 chrX_22985001 RAL-426 2983 chrX 22996293 22996337 chrX 23003547 23003591 roo 8 7253 2.0 6.5 4.2 1.5 7298 chrX 22996293 intron,intron stnA -,stnB - chrX 22999942 intron,intron stnA -,stnB - chrX 23003591 intron,intron stnA -,stnB - chrX_8_22995001 chrX_22995001 RAL-426 2984 chrY 975598 975820 chrY 975718 976005 9 107 100.5 104.0 102.2 0.1 407 chrY 975598 intergenic not near genes chrY 975802 intergenic not near genes chrY 976005 intergenic not near genes chrY_9_975001 chrY_975001 RAL-426 2985 chrY 1419600 1419647 chrY 1419950 1419998 5 351 35.5 29.0 32.2 0.2 398 chrY 1419600 intergenic not near genes chrY 1419799 intergenic not near genes chrY 1419998 intergenic not near genes chrY_5_1415001 chrY_1415001 RAL-426 2986 chrY 3664594 3664619 chrY 3664709 3664741 4 121 0.0 0.0 0.0 4.0 147 chrY 3664594 intergenic CG40948 + chrY 3664668 intergenic CG40948 + chrY 3664741 intergenic CG40948 + chrY_4_3660001 chrY_3660001 RAL-426 2987 chrY 3666427 3666456 chrY 3666600 3666607 4 166 0.5 1.0 0.8 2.2 180 chrY 3666427 intergenic not near genes chrY 3666517 intergenic not near genes chrY 3666607 intergenic not near genes chrY_4_3665001 chrY_3665001 RAL-426