SV#	Chr	Chr_coord_5p	Chr_coord_3p	TE	TE_coord_start	TE_coord_end	Reads_collapsed	Chr_Coord_Dist	Symmetry	avg_blat_score	Norm_RefGen_Reads	Coverage_Ratio	classification	comments	insert_code	loci_code	Sym_score	libname
1	chr2L	164798	164904	I-element	5347	1	52	106	'26-26	66.64	13.1	3.7	intron	spen +	chr2L_52_160001	chr2L_160001	0.50	RAL-40
2	chr2L	225427	225472	jockey	4941	4986	19	45	'9-10	63.13	9.8	1.8	intron	kis -	chr2L_19_225001	chr2L_225001	0.47	RAL-40
3	chr2L	505419	505524	springer	7507	7136	21	105	'10-11	63.95	7.6	2.4	intron	ush +	chr2L_21_505001	chr2L_505001	0.48	RAL-40
4	chr2L	505435	505525	gypsy6	352	7417	4	90	'2-2	71.34	8.1	0.4	intron	ush +	chr2L_4_505001	chr2L_505001	0.50	RAL-40
5	chr2L	839871	839983	roo	402	3	43	112	'19-24	66.70	13.5	3.0	intron	drongo -	chr2L_43_835001	chr2L_835001	0.44	RAL-40
6	chr2L	1339952	1340075	roo	8664	411	49	123	'24-25	67.03	9.8	4.5	intergenic	not near genes	chr2L_49_1335001	chr2L_1335001	0.49	RAL-40
7	chr2L	1486453	1486543	I-element	15	5337	33	90	'23-10	64.89	9.4	3.2	intergenic	not near genes	chr2L_33_1485001	chr2L_1485001	0.70	RAL-40
8	chr2L	1655512	1655632	412	494	1	38	120	'23-15	66.24	9.6	3.6	intron	chinmo +	chr2L_38_1655001	chr2L_1655001	0.61	RAL-40
9	chr2L	1922574	1922605	BS	5020	4992	15	31	'9-6	52.77	8.1	1.6	intron	CG7337 +	chr2L_15_1920001	chr2L_1920001	0.60	RAL-40
10	chr2L	2781526	2781628	roo	16	9069	28	102	'14-14	64.14	9.7	2.6	3` UTR	Syt1 -	chr2L_28_2780001	chr2L_2780001	0.50	RAL-40
11	chr2L	3142851	3142970	roo	8662	405	49	119	'22-27	72.24	9.5	4.7	intron	toc -	chr2L_49_3140001	chr2L_3140001	0.45	RAL-40
12	chr2L	3632133	3632231	P-element	2871	2883	37	98	'19-18	45.56	6.9	4.7	intron	for -	chr2L_37_3630001	chr2L_3630001	0.51	RAL-40
13	chr2L	3691878	3691998	roo	409	8663	46	120	'25-21	68.83	10.1	4.1	3` UTR	CG34340 +	chr2L_46_3690001	chr2L_3690001	0.54	RAL-40
14	chr2L	3877171	3877269	roo	11	397	28	98	'15-13	64.85	8.2	3.0	intron	capu -	chr2L_28_3875001	chr2L_3875001	0.54	RAL-40
15	chr2L	4659165	4659282	roo	2	407	43	117	'26-17	68.22	8.7	4.4	intergenic	not near genes	chr2L_43_4655001	chr2L_4655001	0.60	RAL-40
16	chr2L	5304274	5304371	roo	22	407	42	97	'10-32	67.06	14.1	2.8	intron	vri +	chr2L_42_5300001	chr2L_5300001	0.24	RAL-40
17	chr2L	5393873	5393994	Burdock	254	6136	43	121	'18-25	68.57	8.8	4.4	intergenic	not near genes	chr2L_43_5390001	chr2L_5390001	0.42	RAL-40
18	chr2L	5608533	5608699	INE-1	90	88	9	166	'4-5	67.73	4.3	1.7	intron	CG14010 -	chr2L_9_5605001	chr2L_5605001	0.44	RAL-40
19	chr2L	5724292	5724363	1360	3381	38	12	71	'11-1	67.99	0.2	10.0	intergenic	sip1 +,CG11030 +	chr2L_12_5720001	chr2L_5720001	0.92	RAL-40
20	chr2L	5805213	5805254	jockey	9	18	16	41	'12-4	60.26	0.3	12.3	intergenic	CG11034 +	chr2L_16_5805001	chr2L_5805001	0.75	RAL-40
21	chr2L	6469952	6470071	roo	405	8662	41	119	'16-25	67.64	10.0	3.7	exon	mmy -	chr2L_41_6465001	chr2L_6465001	0.39	RAL-40
22	chr2L	7197418	7197540	Stalker2	404	7248	47	122	'20-27	62.57	8.3	5.1	intron	CG4502 -	chr2L_47_7195001	chr2L_7195001	0.43	RAL-40
23	chr2L	7588190	7588324	mdg1	7080	7069	4	134	'1-3	78.16	1.3	1.7	intergenic	not near genes	chr2L_4_7585001	chr2L_7585001	0.25	RAL-40
24	chr2L	7905877	7905974	Idefix	7386	16	15	97	'3-12	65.68	6.5	2.0	intron	Snoo -	chr2L_15_7905001	chr2L_7905001	0.20	RAL-40
25	chr2L	7931708	7931809	hobo	2931	1	28	101	'7-21	63.85	8.6	2.9	intron	Snoo -	chr2L_28_7930001	chr2L_7930001	0.25	RAL-40
26	chr2L	8162368	8162476	P-element	2881	4	41	108	'21-20	48.98	10.2	3.7	5` UTR	CG8498 -	chr2L_41_8160001	chr2L_8160001	0.51	RAL-40
27	chr2L	8556062	8556105	copia	4871	4914	26	43	'8-18	62.75	14.1	1.7	intron	Sema-1a +	chr2L_26_8555001	chr2L_8555001	0.31	RAL-40
28	chr2L	8950617	8950732	S-element	1712	1712	20	115	'14-6	65.50	8.4	2.1	intron	C1GalTA -	chr2L_20_8950001	chr2L_8950001	0.70	RAL-40
29	chr2L	9090748	9090838	Tirant	403	9	11	90	'4-7	65.29	10.1	1.0	intergenic	not near genes	chr2L_11_9090001	chr2L_9090001	0.36	RAL-40
30	chr2L	9386755	9386809	jockey	4740	4686	29	54	'17-12	62.19	3.9	5.9	intron	Shawl -	chr2L_29_9385001	chr2L_9385001	0.59	RAL-40
31	chr2L	9504987	9505167	NOF	3963	3967	5	180	'2-3	65.90	3.1	1.2	intron	CG33298 +	chr2L_5_9500001	chr2L_9500001	0.40	RAL-40
32	chr2L	9619919	9620023	FB	8	5	32	104	'16-16	67.67	7.9	3.6	intron	GlcAT-S +	chr2L_32_9615001	chr2L_9615001	0.50	RAL-40
33	chr2L	9848628	9848735	hobo	2935	5	26	107	'7-19	63.89	7.6	3.0	intron,5` UTR	nAChRalpha6 -,CR43766 +	chr2L_26_9845001	chr2L_9845001	0.27	RAL-40
34	chr2L	10042363	10042445	hobo	2934	13	11	82	'8-3	63.92	9.2	1.1	intergenic	not near genes	chr2L_11_10040001	chr2L_10040001	0.73	RAL-40
35	chr2L	10469487	10469600	P-element	2882	2885	45	113	'30-15	47.28	11.9	3.5	intron	RluA-1 -	chr2L_45_10465001	chr2L_10465001	0.67	RAL-40
36	chr2L	10587887	10588003	copia	4869	251	50	116	'28-22	68.70	13.9	3.4	intron	Trim9 +	chr2L_50_10585001	chr2L_10585001	0.56	RAL-40
37	chr2L	10714037	10714154	roo	406	8665	41	117	'20-21	67.37	10.9	3.4	intergenic	not near genes	chr2L_41_10710001	chr2L_10710001	0.49	RAL-40
38	chr2L	11297960	11298002	jockey	36	6	15	42	'6-9	64.63	11.4	1.2	intergenic	not near genes	chr2L_15_11295001	chr2L_11295001	0.40	RAL-40
39	chr2L	11609338	11609431	297	2	381	13	93	'11-2	55.42	5.2	2.1	intron	kek2 +	chr2L_13_11605001	chr2L_11605001	0.85	RAL-40
40	chr2L	12156909	12157173	INE-1	543	90	9	264	'1-8	52.53	1.9	3.1	intron	CG31760 +	chr2L_9_12155001	chr2L_12155001	0.11	RAL-40
41	chr2L	12269619	12269651	jockey	4978	4946	18	32	'9-9	62.02	3.8	3.8	intron	aret +	chr2L_18_12265001	chr2L_12265001	0.50	RAL-40
42	chr2L	12283927	12284052	297	392	6582	24	125	'21-3	68.00	6.0	3.4	intron	aret +	chr2L_24_12280001	chr2L_12280001	0.88	RAL-40
43	chr2L	12360308	12360426	Burdock	6388	1	49	118	'28-21	64.76	10.8	4.2	intron	bru-2 +	chr2L_49_12360001	chr2L_12360001	0.57	RAL-40
44	chr2L	12361191	12361225	jockey	27	9	14	34	'7-7	53.81	8.7	1.4	intron	bru-2 +	chr2L_14_12360001	chr2L_12360001	0.50	RAL-40
45	chr2L	12505246	12505358	S-element	7	1711	19	112	'14-5	65.31	9.1	1.9	intron	bun -	chr2L_19_12505001	chr2L_12505001	0.74	RAL-40
46	chr2L	13292938	13292987	X-element	4712	4674	28	49	'14-14	63.17	11.3	2.3	intron	CG31729 +	chr2L_28_13290001	chr2L_13290001	0.50	RAL-40
47	chr2L	13537741	13537859	pogo	4	2099	41	118	'24-17	64.65	10.0	3.7	intron	B4 -	chr2L_41_13535001	chr2L_13535001	0.59	RAL-40
48	chr2L	13555033	13555120	Burdock	6370	6135	29	87	'15-14	63.74	5.5	4.5	intron	kuz +	chr2L_29_13555001	chr2L_13555001	0.52	RAL-40
49	chr2L	13731715	13731824	hopper	1414	1	25	109	'13-12	57.27	3.9	5.1	intergenic	not near genes	chr2L_25_13730001	chr2L_13730001	0.52	RAL-40
50	chr2L	13879706	13879827	roo	407	8662	30	121	'18-12	67.76	7.1	3.7	intron	CenG1A +	chr2L_30_13875001	chr2L_13875001	0.60	RAL-40
51	chr2L	14046904	14047016	copia	246	4868	40	112	'21-19	66.42	10.7	3.4	intron	nAChRalpha5 +	chr2L_40_14045001	chr2L_14045001	0.53	RAL-40
52	chr2L	14073945	14074069	copia	4865	253	32	124	'11-21	67.68	7.1	4.0	intron	nAChRalpha5 +	chr2L_32_14070001	chr2L_14070001	0.34	RAL-40
53	chr2L	14283510	14283618	pogo	7	2093	27	108	'10-17	70.03	11.7	2.1	intron	wb +	chr2L_27_14280001	chr2L_14280001	0.37	RAL-40
54	chr2L	14477367	14477482	Burdock	6386	6134	32	115	'20-12	63.15	10.9	2.7	intergenic	not near genes	chr2L_32_14475001	chr2L_14475001	0.62	RAL-40
55	chr2L	14490539	14490626	P-element	10	2886	24	87	'15-9	44.83	8.5	2.5	intergenic	noc +	chr2L_24_14490001	chr2L_14490001	0.62	RAL-40
56	chr2L	14857794	14857908	Tabor	3	7320	39	114	'19-20	63.45	10.0	3.5	intergenic	not near genes	chr2L_39_14855001	chr2L_14855001	0.49	RAL-40
57	chr2L	15551052	15551171	roo	408	1	37	119	'8-29	66.83	6.4	5.0	intron	CG15256 +	chr2L_37_15550001	chr2L_15550001	0.22	RAL-40
58	chr2L	15610143	15610197	Doc	16	2	18	54	'14-4	67.95	14.3	1.2	intergenic	CG15255 -,CR44865 +	chr2L_18_15610001	chr2L_15610001	0.78	RAL-40
59	chr2L	15777584	15777623	jockey	14	20	15	39	'2-13	56.06	6.4	2.0	intergenic	not near genes	chr2L_15_15775001	chr2L_15775001	0.13	RAL-40
60	chr2L	15815062	15815178	Tabor	3	487	37	116	'18-19	64.94	9.2	3.6	intergenic	not near genes	chr2L_37_15815001	chr2L_15815001	0.49	RAL-40
61	chr2L	15883344	15883464	412	494	2	46	120	'23-23	66.98	10.1	4.1	intergenic	CG44475 -	chr2L_46_15880001	chr2L_15880001	0.50	RAL-40
62	chr2L	15894524	15894617	Tc1-2	480	479	4	93	'2-2	64.17	4.9	0.7	intergenic	not near genes	chr2L_4_15890001	chr2L_15890001	0.50	RAL-40
63	chr2L	15894537	15894636	BS	5080	5074	7	99	'4-3	63.39	6.1	1.0	intergenic	not near genes	chr2L_7_15890001	chr2L_15890001	0.57	RAL-40
64	chr2L	15913570	15913683	hopper	1414	6	38	113	'24-14	65.13	9.8	3.5	intron	beat-Ib -	chr2L_38_15910001	chr2L_15910001	0.63	RAL-40
65	chr2L	15932372	15932490	pogo	4	2098	26	118	'17-9	58.32	7.0	3.2	intron	beat-Ib -	chr2L_26_15930001	chr2L_15930001	0.65	RAL-40
66	chr2L	15950209	15950321	roo	404	4	39	112	'16-23	66.30	7.0	4.9	intron	beat-Ib -	chr2L_39_15950001	chr2L_15950001	0.41	RAL-40
67	chr2L	15950480	15950587	17.6	6940	490	22	107	'10-12	70.28	3.1	5.4	intron	beat-Ib -	chr2L_22_15950001	chr2L_15950001	0.45	RAL-40
68	chr2L	15975877	15975925	297	6955	6971	15	48	'7-8	67.91	9.4	1.4	intergenic	not near genes	chr2L_15_15975001	chr2L_15975001	0.47	RAL-40
69	chr2L	16067048	16067165	HMS-Beagle2	311	4	39	117	'15-24	65.76	7.7	4.5	intron	beat-Ia +	chr2L_39_16065001	chr2L_16065001	0.38	RAL-40
70	chr2L	16495252	16495304	Doc	18	5	27	52	'16-11	65.54	7.3	3.3	intron	Tpr2 +	chr2L_27_16495001	chr2L_16495001	0.59	RAL-40
71	chr2L	16805800	16805913	mdg3	242	5256	35	113	'18-17	63.03	8.9	3.5	intron,intron	CG13280 -,CG13272 +	chr2L_35_16805001	chr2L_16805001	0.51	RAL-40
72	chr2L	16812983	16813027	F-element	25	14	14	44	'6-8	62.78	6.2	1.9	intron,intron	CG13280 -,CG13272 +	chr2L_14_16810001	chr2L_16810001	0.43	RAL-40
73	chr2L	16851555	16851655	Juan	320	4206	26	100	'14-12	61.43	6.3	3.6	intron	CG31810 -	chr2L_26_16850001	chr2L_16850001	0.54	RAL-40
74	chr2L	17156603	17156722	mdg3	248	5256	32	119	'14-18	65.04	7.5	3.8	intron,intron	CG34106 +,beat-IIIa +	chr2L_32_17155001	chr2L_17155001	0.44	RAL-40
75	chr2L	17288634	17288748	Transpac	2	5223	40	114	'23-17	66.80	9.2	3.9	intergenic	not near genes	chr2L_40_17285001	chr2L_17285001	0.57	RAL-40
76	chr2L	17547941	17547995	jockey	4812	4758	27	54	'13-14	64.27	7.9	3.0	intergenic	CR45697 +	chr2L_27_17545001	chr2L_17545001	0.48	RAL-40
77	chr2L	17574375	17574445	hopper	1386	23	4	70	'2-2	63.87	8.4	0.4	intergenic	mir-287 +	chr2L_4_17570001	chr2L_17570001	0.50	RAL-40
78	chr2L	17675835	17675872	I-element	5346	5309	17	37	'8-9	60.99	13.3	1.2	intron	CadN -	chr2L_17_17675001	chr2L_17675001	0.47	RAL-40
79	chr2L	17746413	17746527	copia	250	4870	34	114	'13-21	66.77	4.9	5.8	intron	CadN -	chr2L_34_17745001	chr2L_17745001	0.38	RAL-40
80	chr2L	18177043	18177072	INE-1	548	552	6	29	'3-3	66.73	15.7	0.4	intron	CG42750 -	chr2L_6_18175001	chr2L_18175001	0.50	RAL-40
81	chr2L	18269992	18270094	I-element	1	5349	23	102	'12-11	63.01	10.5	2.0	intron	CG42750 -	chr2L_23_18265001	chr2L_18265001	0.52	RAL-40
82	chr2L	18570470	18570569	FB	11	7	37	99	'20-17	65.01	4.2	7.1	intron	Pde11 -	chr2L_37_18570001	chr2L_18570001	0.54	RAL-40
83	chr2L	19085184	19085304	invader4	324	2759	26	120	'18-8	70.26	10.4	2.3	intron	Lim3 -	chr2L_26_19085001	chr2L_19085001	0.69	RAL-40
84	chr2L	19129304	19129415	FB	1	4	38	111	'23-15	67.05	11.8	3.0	3` UTR	l(2)37Cd +	chr2L_38_19125001	chr2L_19125001	0.61	RAL-40
85	chr2L	19644851	19644973	blood	379	1	55	122	'29-26	64.31	8.5	5.8	intron	Lar +	chr2L_55_19640001	chr2L_19640001	0.53	RAL-40
86	chr2L	19841429	19841531	hobo	2937	6	25	102	'11-14	63.80	9.3	2.4	intron	sick +	chr2L_25_19840001	chr2L_19840001	0.44	RAL-40
87	chr2L	20124747	20124863	roo	8673	413	43	116	'20-23	65.14	9.0	4.3	intergenic	not near genes	chr2L_43_20120001	chr2L_20120001	0.47	RAL-40
88	chr2L	20169326	20169459	invader3	5185	5461	28	133	'14-14	64.01	1.2	12.7	intergenic	not near genes	chr2L_28_20165001	chr2L_20165001	0.50	RAL-40
89	chr2L	20209133	20209158	mdg3	52	79	14	25	'13-1	65.81	28.5	0.5	intergenic	not near genes	chr2L_14_20205001	chr2L_20205001	0.93	RAL-40
90	chr2L	20229686	20229793	17.6	485	3	15	107	'9-6	64.16	8.3	1.6	intergenic	not near genes	chr2L_15_20225001	chr2L_20225001	0.60	RAL-40
91	chr2L	20540902	20540996	I-element	5344	3	30	94	'12-18	64.36	7.5	3.5	intergenic	not near genes	chr2L_30_20540001	chr2L_20540001	0.40	RAL-40
92	chr2L	20567801	20567911	297	6586	388	23	110	'6-17	67.14	8.7	2.4	intron	CR45347 +	chr2L_23_20565001	chr2L_20565001	0.26	RAL-40
93	chr2L	20648441	20648559	297	6972	1	38	118	'18-20	66.85	8.6	4.0	5` UTR	Uhg3 +	chr2L_38_20645001	chr2L_20645001	0.47	RAL-40
94	chr2L	20721827	20721939	297	6968	3	16	112	'12-4	68.43	8.0	1.8	intergenic	CR45306 +	chr2L_16_20720001	chr2L_20720001	0.75	RAL-40
95	chr2L	20928048	20928089	Chimpo	2	43	13	41	'4-9	58.30	8.0	1.4	intergenic	CG9272 -	chr2L_13_20925001	chr2L_20925001	0.31	RAL-40
96	chr2L	21400080	21400199	pogo	2100	3	27	119	'13-14	65.88	8.0	3.0	intergenic	not near genes	chr2L_27_21400001	chr2L_21400001	0.48	RAL-40
97	chr2L	21400697	21400809	Doc3-element	3	4719	4	112	'1-3	53.16	14.5	0.3	intergenic	not near genes	chr2L_4_21400001	chr2L_21400001	0.25	RAL-40
98	chr2L	21403526	21403556	G5	4420	4393	9	30	'6-3	61.00	6.5	1.2	intergenic	not near genes	chr2L_9_21400001	chr2L_21400001	0.67	RAL-40
99	chr2L	21570226	21570267	Dm88	50	4369	18	41	'6-12	65.50	5.0	3.0	intergenic	not near genes	chr2L_18_21570001	chr2L_21570001	0.33	RAL-40
100	chr2L	21687105	21687141	mariner2	843	887	6	36	'5-1	71.12	4.8	1.0	intron	CG31619 +	chr2L_6_21685001	chr2L_21685001	0.83	RAL-40
101	chr2L	21715729	21715755	pogo	12	23	12	26	'6-6	62.55	18.2	0.6	intron	CG31619 +	chr2L_12_21715001	chr2L_21715001	0.50	RAL-40
102	chr2L	21903034	21903152	412	2	7546	49	118	'26-23	65.20	13.1	3.5	5` UTR	CG1421 +	chr2L_49_21900001	chr2L_21900001	0.53	RAL-40
103	chr2L	22054726	22054848	Transpac	311	4920	37	122	'23-14	61.27	9.4	3.6	intergenic	CG34173 -	chr2L_37_22050001	chr2L_22050001	0.62	RAL-40
104	chr2L	22112993	22113024	pogo	52	2076	4	31	'3-1	73.97	12.7	0.3	intergenic	not near genes	chr2L_4_22110001	chr2L_22110001	0.75	RAL-40
105	chr2L	22362091	22362208	pogo	6	2100	28	117	'10-18	64.95	8.3	3.0	intron	CG17018 +	chr2L_28_22360001	chr2L_22360001	0.36	RAL-40
106	chr2L	22578513	22578621	P-element	2878	2886	14	108	'4-10	55.33	15.7	0.8	intergenic	not near genes	chr2L_14_22575001	chr2L_22575001	0.29	RAL-40
107	chr2L	22776399	22776437	3S18	331	6059	14	38	'4-10	67.12	11.2	1.1	intergenic	not near genes	chr2L_14_22775001	chr2L_22775001	0.29	RAL-40
108	chr2L	22778208	22778245	3S18	38	5766	24	37	'15-9	54.23	7.0	3.0	intergenic	not near genes	chr2L_24_22775001	chr2L_22775001	0.62	RAL-40
109	chr2L	23021963	23022037	flea	5005	4792	19	74	'13-6	68.15	11.0	1.6	intron	Cht3 -	chr2L_19_23020001	chr2L_23020001	0.68	RAL-40
110	chr2L	23034036	23034061	FB	396	416	5	25	'3-2	45.16	13.1	0.4	intergenic	not near genes	chr2L_5_23030001	chr2L_23030001	0.60	RAL-40
111	chr2L	23068833	23068945	1360	3387	3384	59	112	'30-29	66.98	9.3	5.7	intergenic	CR43242 +,Spf45 -	chr2L_59_23065001	chr2L_23065001	0.51	RAL-40
112	chr2L	23167490	23167614	roo	8661	409	40	124	'29-11	67.07	10.5	3.5	intron	CG12567 -	chr2L_40_23165001	chr2L_23165001	0.72	RAL-40
113	chr2L	23295839	23295885	micropia	5081	3	19	46	'10-9	64.58	12.7	1.4	intergenic	not near genes	chr2L_19_23295001	chr2L_23295001	0.53	RAL-40
114	chr2R	544772	544885	HMS-Beagle	6795	7033	26	113	'12-14	67.82	5.3	4.1	intron	CG40378 +	chr2R_26_540001	chr2R_540001	0.46	RAL-40
115	chr2R	611441	611543	412	489	7068	17	102	'10-7	60.54	6.1	2.4	intron	CG40378 +	chr2R_17_610001	chr2R_610001	0.59	RAL-40
116	chr2R	675608	675655	F-element	18	34	11	47	'7-4	66.89	4.6	2.0	intron	CG43676 +	chr2R_11_675001	chr2R_675001	0.64	RAL-40
117	chr2R	969153	969219	mdg1	32	7437	17	66	'4-13	64.37	7.3	2.0	intergenic	not near genes	chr2R_17_965001	chr2R_965001	0.24	RAL-40
118	chr2R	2125053	2125120	roo	5	358	16	67	'12-4	68.24	7.4	1.9	intron	CG17684 -	chr2R_16_2125001	chr2R_2125001	0.75	RAL-40
119	chr2R	2745199	2745255	blood	34	7363	7	56	'3-4	65.76	8.2	0.8	intergenic	not near genes	chr2R_7_2745001	chr2R_2745001	0.43	RAL-40
120	chr2R	2879431	2879485	Stalker	94	6997	6	54	'3-3	64.71	13.1	0.4	intergenic	not near genes	chr2R_6_2875001	chr2R_2875001	0.50	RAL-40
121	chr2R	2879456	2879484	Stalker4	124	147	6	28	'5-1	59.31	15.6	0.4	intergenic	not near genes	chr2R_6_2875001	chr2R_2875001	0.83	RAL-40
122	chr2R	3558277	3558318	F-element	9	18	9	41	'4-5	62.66	12.2	0.7	intergenic	not near genes	chr2R_9_3555001	chr2R_3555001	0.44	RAL-40
123	chr2R	3558786	3558837	F-element	4215	4241	13	51	'4-9	63.65	5.1	2.1	intergenic	not near genes	chr2R_13_3555001	chr2R_3555001	0.31	RAL-40
124	chr2R	3785646	3785686	opus	460	481	4	40	'1-3	59.55	4.2	0.8	intergenic	not near genes	chr2R_4_3785001	chr2R_3785001	0.25	RAL-40
125	chr2R	4012246	4012359	roo	404	8667	46	113	'21-25	67.41	8.0	5.1	intergenic	not near genes	chr2R_46_4010001	chr2R_4010001	0.46	RAL-40
126	chr2R	4559035	4559151	pogo	2	2095	20	116	'14-6	65.45	7.8	2.3	intron	Stlk +	chr2R_20_4555001	chr2R_4555001	0.70	RAL-40
127	chr2R	4673560	4673596	Quasimodo	7361	7325	12	36	'5-7	67.40	12.6	0.9	3` UTR	CG17883 +	chr2R_12_4670001	chr2R_4670001	0.42	RAL-40
128	chr2R	4731233	4731261	F-element	22	22	5	28	'1-4	56.78	4.8	0.9	5` UTR	CR45471 +	chr2R_5_4730001	chr2R_4730001	0.20	RAL-40
129	chr2R	5018782	5018811	rooA	34	7270	10	29	'4-6	60.14	6.6	1.3	intron	Ir41a +	chr2R_10_5015001	chr2R_5015001	0.40	RAL-40
130	chr2R	5173182	5173226	Stalker4	7324	405	26	44	'11-15	64.06	8.2	2.8	intergenic	not near genes	chr2R_26_5170001	chr2R_5170001	0.42	RAL-40
131	chr2R	5674628	5674748	S-element	1	7	28	120	'15-13	66.90	10.1	2.5	intergenic	not near genes	chr2R_28_5670001	chr2R_5670001	0.54	RAL-40
132	chr2R	5707285	5707407	pogo	2100	1	50	122	'21-29	66.06	9.4	4.8	3` UTR	ap -	chr2R_50_5705001	chr2R_5705001	0.42	RAL-40
133	chr2R	5978965	5979018	F-element	18	44	28	53	'19-9	66.85	12.8	2.0	intron	mle -	chr2R_28_5975001	chr2R_5975001	0.68	RAL-40
134	chr2R	6041537	6041647	flea	4758	245	23	110	'14-9	67.44	9.3	2.2	intergenic	not near genes	chr2R_23_6040001	chr2R_6040001	0.61	RAL-40
135	chr2R	6564992	6565110	blood	7009	375	39	118	'23-16	64.60	8.8	4.0	intron	jing +	chr2R_39_6560001	chr2R_6560001	0.59	RAL-40
136	chr2R	6757300	6757406	P-element	2883	2885	47	106	'22-25	50.47	11.0	3.9	intergenic	CG3420 -,CG9436 -	chr2R_47_6755001	chr2R_6755001	0.47	RAL-40
137	chr2R	6779745	6779865	17.6	492	1	48	120	'27-21	67.84	9.2	4.7	intron	Epac -	chr2R_48_6775001	chr2R_6775001	0.56	RAL-40
138	chr2R	7040099	7040208	P-element	3	2881	16	109	'3-13	56.04	9.4	1.5	intergenic	Tsp42Ej +	chr2R_16_7040001	chr2R_7040001	0.19	RAL-40
139	chr2R	7362359	7362475	roo	8663	403	44	116	'24-20	66.48	10.8	3.7	intron	Dscam1 -	chr2R_44_7360001	chr2R_7360001	0.55	RAL-40
140	chr2R	7394085	7394121	mariner2	24	23	4	36	'1-3	63.61	1.0	2.0	intron	CG1707 -	chr2R_4_7390001	chr2R_7390001	0.25	RAL-40
141	chr2R	7454383	7454488	Juan	3790	4207	19	105	'17-2	62.12	7.4	2.3	intergenic	not near genes	chr2R_19_7450001	chr2R_7450001	0.89	RAL-40
142	chr2R	7543000	7543114	hobo	5	2710	28	114	'15-13	66.10	11.8	2.2	intron	Corin +	chr2R_28_7540001	chr2R_7540001	0.54	RAL-40
143	chr2R	8086851	8086962	1360	2	3383	43	111	'19-24	68.51	9.8	4.0	3` UTR	sut1 +	chr2R_43_8085001	chr2R_8085001	0.44	RAL-40
144	chr2R	8086877	8086967	Tc3	318	238	5	90	'1-4	76.20	9.9	0.5	3` UTR	sut1 +	chr2R_5_8085001	chr2R_8085001	0.20	RAL-40
145	chr2R	8506158	8506207	Doc	22	4	18	49	'13-5	64.76	9.8	1.7	intron	mtt -	chr2R_18_8505001	chr2R_8505001	0.72	RAL-40
146	chr2R	8546629	8546748	Transpac	5228	2	43	119	'20-23	66.47	12.2	3.3	intergenic	not near genes	chr2R_43_8545001	chr2R_8545001	0.47	RAL-40
147	chr2R	8565716	8565748	1360	73	107	6	32	'3-3	60.25	15.2	0.4	exon	Cyp6a14 -	chr2R_6_8565001	chr2R_8565001	0.50	RAL-40
148	chr2R	8642880	8642989	Doc2-element	4767	4691	39	109	'18-21	62.48	7.1	4.8	intergenic	not near genes	chr2R_39_8640001	chr2R_8640001	0.46	RAL-40
149	chr2R	8687075	8687192	roo	8662	403	56	117	'34-22	66.94	10.9	4.7	intergenic	not near genes	chr2R_56_8685001	chr2R_8685001	0.61	RAL-40
150	chr2R	8769719	8769762	G2	2846	2859	15	43	'6-9	62.77	13.5	1.0	intergenic	not near genes	chr2R_15_8765001	chr2R_8765001	0.40	RAL-40
151	chr2R	9164473	9164593	roo	409	1	42	120	'22-20	67.05	10.0	3.8	5` UTR	CG8046 -	chr2R_42_9160001	chr2R_9160001	0.52	RAL-40
152	chr2R	9326950	9327074	mdg3	5252	249	33	124	'24-9	66.87	5.0	5.5	intron,intron	CG13739 -,CG13954 -	chr2R_33_9325001	chr2R_9325001	0.73	RAL-40
153	chr2R	9549245	9549347	Juan	4211	4024	44	102	'22-22	62.92	10.6	3.8	intergenic	not near genes	chr2R_44_9545001	chr2R_9545001	0.50	RAL-40
154	chr2R	9738332	9738421	invader6	4388	4390	4	89	'1-3	50.26	1.2	1.8	intron	sqa -	chr2R_4_9735001	chr2R_9735001	0.25	RAL-40
155	chr2R	9831689	9831803	roo	408	6	38	114	'18-20	66.08	11.8	3.0	intron	hebe -	chr2R_38_9830001	chr2R_9830001	0.47	RAL-40
156	chr2R	9950439	9950553	opus	490	113	25	114	'13-12	68.05	10.1	2.3	intron	Mef2 -	chr2R_25_9950001	chr2R_9950001	0.52	RAL-40
157	chr2R	10387862	10387984	opus	498	113	4	122	'1-3	47.63	1.2	1.8	intron	CG42732 -	chr2R_4_10385001	chr2R_10385001	0.25	RAL-40
158	chr2R	10585210	10585290	S-element	1691	1697	21	80	'8-13	66.10	6.6	2.8	intron	psq +	chr2R_21_10585001	chr2R_10585001	0.38	RAL-40
159	chr2R	10672407	10672529	roo	8663	409	59	122	'24-35	66.86	10.7	5.0	intergenic	not near genes	chr2R_59_10670001	chr2R_10670001	0.41	RAL-40
160	chr2R	10865625	10865717	297	395	6586	29	92	'16-13	58.05	9.6	2.7	intron	CG30015 -	chr2R_29_10865001	chr2R_10865001	0.55	RAL-40
161	chr2R	10916234	10916352	Stalker2	7248	400	38	118	'23-15	65.12	10.4	3.3	intergenic	not near genes	chr2R_38_10915001	chr2R_10915001	0.61	RAL-40
162	chr2R	10967557	10967591	F-element	29	22	18	34	'13-5	58.33	1.7	6.7	intergenic	not near genes	chr2R_18_10965001	chr2R_10965001	0.72	RAL-40
163	chr2R	10969666	10969745	Idefix	26	7375	14	79	'8-6	71.10	6.5	1.9	intergenic	not near genes	chr2R_14_10965001	chr2R_10965001	0.57	RAL-40
164	chr2R	11057577	11057697	roo	407	8663	42	120	'24-18	65.53	9.0	4.2	intron	luna -	chr2R_42_11055001	chr2R_11055001	0.57	RAL-40
165	chr2R	11109061	11109157	hobo	2926	9	30	96	'8-22	63.26	9.9	2.8	intron	luna -	chr2R_30_11105001	chr2R_11105001	0.27	RAL-40
166	chr2R	11410426	11410545	roo	8664	407	36	119	'23-13	70.02	12.2	2.7	5` UTR	CG34054 -	chr2R_36_11410001	chr2R_11410001	0.64	RAL-40
167	chr2R	11500740	11500824	1360	3387	6	24	84	'10-14	68.90	12.4	1.8	intron	inv +	chr2R_24_11500001	chr2R_11500001	0.42	RAL-40
168	chr2R	11697818	11698126	Tirant	8	403	20	308	'9-11	58.58	4.0	4.0	intergenic	CG13197 +	chr2R_20_11695001	chr2R_11695001	0.45	RAL-40
169	chr2R	12185308	12185427	accord	7382	1	22	119	'8-14	62.68	15.9	1.3	3` UTR,3` UTR	CG13175 +,CG33964 +	chr2R_22_12185001	chr2R_12185001	0.36	RAL-40
170	chr2R	12336628	12336669	pogo	28	7	18	41	'14-4	66.50	10.1	1.6	intergenic	CG34021 +,CG8490 +	chr2R_18_12335001	chr2R_12335001	0.78	RAL-40
171	chr2R	12419503	12419546	jockey	4945	4988	24	43	'13-11	61.64	13.0	1.7	intergenic	CG42782 -,CG8834 -	chr2R_24_12415001	chr2R_12415001	0.54	RAL-40
172	chr2R	12479037	12479106	FB	8	40	16	69	'11-5	69.33	8.9	1.6	intron	Dh44-R2 +	chr2R_16_12475001	chr2R_12475001	0.69	RAL-40
173	chr2R	12784050	12784159	hobo	8	2938	27	109	'21-6	66.01	10.4	2.4	intron,3` UTR	sca +,CR45137 -	chr2R_27_12780001	chr2R_12780001	0.78	RAL-40
174	chr2R	12960196	12960249	P-element	50	2873	23	53	'16-7	37.62	7.0	2.9	intergenic	not near genes	chr2R_23_12960001	chr2R_12960001	0.70	RAL-40
175	chr2R	13012939	13013045	Quasimodo	7366	8	12	106	'7-5	66.46	9.7	1.1	intergenic	not near genes	chr2R_12_13010001	chr2R_13010001	0.58	RAL-40
176	chr2R	13024388	13024508	blood	379	7013	42	120	'22-20	66.49	9.7	3.9	intergenic	not near genes	chr2R_42_13020001	chr2R_13020001	0.52	RAL-40
177	chr2R	13586699	13586737	F-element	59	21	12	38	'3-9	62.80	17.4	0.7	intron,intron	CG6191 -,CG45088 -	chr2R_12_13585001	chr2R_13585001	0.25	RAL-40
178	chr2R	13714822	13714943	Transpac	4920	310	31	121	'11-20	68.64	7.1	3.8	exon	fas +	chr2R_31_13710001	chr2R_13710001	0.35	RAL-40
179	chr2R	13896633	13896727	I-element	2	5342	12	94	'2-10	64.34	9.6	1.1	intron	shot -	chr2R_12_13895001	chr2R_13895001	0.17	RAL-40
180	chr2R	14077285	14077394	jockey	7	4986	36	109	'13-23	61.95	8.9	3.6	intron	Prosap -	chr2R_36_14075001	chr2R_14075001	0.36	RAL-40
181	chr2R	14134442	14134553	FB	5	1	39	111	'17-22	67.19	8.9	3.9	intron	Prosap -	chr2R_39_14130001	chr2R_14130001	0.44	RAL-40
182	chr2R	14332201	14332248	jockey	4691	4679	21	47	'11-10	60.20	12.5	1.6	intron	Shroom +	chr2R_21_14330001	chr2R_14330001	0.52	RAL-40
183	chr2R	14443825	14444008	G3	4503	4503	6	183	'3-3	72.29	3.1	1.5	intron	Oaz +	chr2R_6_14440001	chr2R_14440001	0.50	RAL-40
184	chr2R	14579796	14579824	jockey	14	7	13	28	'5-8	45.78	11.5	1.0	intron	ttv +	chr2R_13_14575001	chr2R_14575001	0.38	RAL-40
185	chr2R	14707081	14707203	Tabor	2	488	52	122	'22-30	61.82	8.9	5.3	intron	mspo -	chr2R_52_14705001	chr2R_14705001	0.42	RAL-40
186	chr2R	14766392	14766492	jockey	4990	5	36	100	'19-17	59.36	6.0	5.1	intron	Spred -	chr2R_36_14765001	chr2R_14765001	0.53	RAL-40
187	chr2R	15004758	15005125	BS	5084	4993	16	367	'3-13	55.82	1.4	6.7	intergenic	not near genes	chr2R_16_15000001	chr2R_15000001	0.19	RAL-40
188	chr2R	15059015	15059117	roo	8663	389	40	102	'25-15	63.71	7.8	4.5	intergenic	not near genes	chr2R_40_15055001	chr2R_15055001	0.62	RAL-40
189	chr2R	15301088	15301176	I-element	5345	71	37	88	'19-18	62.85	8.9	3.7	intron	Trpm -	chr2R_37_15300001	chr2R_15300001	0.51	RAL-40
190	chr2R	15374755	15374796	1360	11	412	7	41	'2-5	63.14	6.2	1.0	intergenic	not near genes	chr2R_7_15370001	chr2R_15370001	0.29	RAL-40
191	chr2R	15625484	15625603	blood	373	7009	41	119	'14-27	66.62	9.2	4.0	intron	CG42524 +	chr2R_41_15625001	chr2R_15625001	0.34	RAL-40
192	chr2R	15917217	15917327	pogo	9	2096	26	110	'13-13	63.51	5.1	4.3	intron	sli -	chr2R_26_15915001	chr2R_15915001	0.50	RAL-40
193	chr2R	16059691	16059795	roo	8	400	27	104	'24-3	66.55	8.5	2.8	3` UTR	CG8405 +	chr2R_27_16055001	chr2R_16055001	0.89	RAL-40
194	chr2R	16187104	16187145	1360	22	3341	12	41	'11-1	69.40	9.2	1.2	exon	clu +	chr2R_12_16185001	chr2R_16185001	0.92	RAL-40
195	chr2R	16366781	16366870	hopper	3	1385	13	89	'11-2	66.04	5.1	2.1	intergenic	not near genes	chr2R_13_16365001	chr2R_16365001	0.85	RAL-40
196	chr2R	16472797	16472876	hobo	24	2926	16	79	'11-5	69.03	4.7	2.8	intergenic	not near genes	chr2R_16_16470001	chr2R_16470001	0.69	RAL-40
197	chr2R	16745544	16745595	Tabor	436	487	21	51	'14-7	63.41	10.8	1.8	3` UTR	CG15617 -	chr2R_21_16745001	chr2R_16745001	0.67	RAL-40
198	chr2R	16884694	16884806	roo	8670	406	50	112	'29-21	66.38	12.5	3.7	intron,3` UTR	CG8910 -,CG6472 +	chr2R_50_16880001	chr2R_16880001	0.58	RAL-40
199	chr2R	16891820	16891866	hopper	2	26	8	46	'4-4	66.36	8.0	0.9	intron	CG8910 -	chr2R_8_16890001	chr2R_16890001	0.50	RAL-40
200	chr2R	17307859	17307971	412	493	9	38	112	'18-20	63.92	6.3	5.2	intron	mbl +	chr2R_38_17305001	chr2R_17305001	0.47	RAL-40
201	chr2R	17315319	17315435	1360	3388	2	33	116	'17-16	65.26	7.9	3.7	intron	mbl +	chr2R_33_17315001	chr2R_17315001	0.52	RAL-40
202	chr2R	17411614	17411728	P-element	4	2886	24	114	'13-11	52.52	8.6	2.5	intergenic	not near genes	chr2R_24_17410001	chr2R_17410001	0.54	RAL-40
203	chr2R	17686888	17687004	1360	1	3387	50	116	'29-21	66.60	9.4	4.8	intron	HPS4 +	chr2R_50_17685001	chr2R_17685001	0.58	RAL-40
204	chr2R	17691634	17691748	1360	3385	3388	58	114	'29-29	67.26	10.4	5.1	exon	swi2 -	chr2R_58_17690001	chr2R_17690001	0.50	RAL-40
205	chr2R	17877617	17877714	roo	9047	8663	36	97	'16-20	67.56	4.9	6.1	intron,exon	Elk +,CG30325 -	chr2R_36_17875001	chr2R_17875001	0.44	RAL-40
206	chr2R	18528583	18528631	jockey	9	58	19	48	'13-6	60.79	10.4	1.7	intron	CG10924 +	chr2R_19_18525001	chr2R_18525001	0.68	RAL-40
207	chr2R	18807870	18807907	BS	5048	5083	15	37	'7-8	67.63	5.1	2.5	intergenic	CG15096 -	chr2R_15_18805001	chr2R_18805001	0.47	RAL-40
208	chr2R	18990058	18990161	412	7539	11	36	103	'23-13	64.61	6.3	4.9	intron	tn +	chr2R_36_18990001	chr2R_18990001	0.64	RAL-40
209	chr2R	19145849	19145960	copia	4867	248	23	111	'12-11	63.33	8.6	2.4	intron	ena +	chr2R_23_19145001	chr2R_19145001	0.52	RAL-40
210	chr2R	19319712	19319834	roo	8664	410	34	122	'18-16	68.93	8.5	3.6	intron	Rgk1 -	chr2R_34_19315001	chr2R_19315001	0.53	RAL-40
211	chr2R	19330255	19330374	McClintock	5952	476	43	119	'25-18	66.42	10.3	3.8	intron	Rgk1 -	chr2R_43_19330001	chr2R_19330001	0.58	RAL-40
212	chr2R	19520124	19520220	hobo	2925	8	29	96	'5-24	62.90	8.8	3.0	3` UTR	sm -	chr2R_29_19520001	chr2R_19520001	0.17	RAL-40
213	chr2R	19543787	19543869	hobo	2935	32	15	82	'13-2	66.81	6.7	1.9	intron	sm -	chr2R_15_19540001	chr2R_19540001	0.87	RAL-40
214	chr2R	19618983	19619065	Tirant	399	8	14	82	'11-3	62.13	9.4	1.3	intron	sm -	chr2R_14_19615001	chr2R_19615001	0.79	RAL-40
215	chr2R	20799075	20799275	1360	3036	3036	5	200	'1-4	68.42	4.3	0.9	intergenic	not near genes	chr2R_5_20795001	chr2R_20795001	0.20	RAL-40
216	chr2R	21280473	21280592	gtwin	7386	6914	29	119	'16-13	61.93	5.6	4.4	3` UTR	Rgk3 +	chr2R_29_21280001	chr2R_21280001	0.55	RAL-40
217	chr2R	21442238	21442362	Transpac	311	4918	41	124	'18-23	66.72	7.6	4.8	intron	Sdc -	chr2R_41_21440001	chr2R_21440001	0.44	RAL-40
218	chr2R	21494057	21494162	FB	11	1	25	105	'7-18	66.28	9.2	2.5	intron	Fkbp14 -	chr2R_25_21490001	chr2R_21490001	0.28	RAL-40
219	chr2R	22040565	22040665	Transpac	310	4934	22	100	'9-13	66.21	7.7	2.5	intergenic	not near genes	chr2R_22_22040001	chr2R_22040001	0.41	RAL-40
220	chr2R	22044684	22044791	412	495	10	31	107	'7-24	65.56	11.0	2.6	intergenic	not near genes	chr2R_31_22040001	chr2R_22040001	0.23	RAL-40
221	chr2R	22250911	22250992	Idefix	5	7361	6	81	'4-2	68.32	6.6	0.8	intron	dve +	chr2R_6_22250001	chr2R_22250001	0.67	RAL-40
222	chr2R	22973517	22973624	412	495	16	34	107	'25-9	63.81	9.6	3.2	intergenic	not near genes	chr2R_34_22970001	chr2R_22970001	0.74	RAL-40
223	chr2R	23123780	23123887	412	11	493	36	107	'20-16	59.72	4.8	6.2	intergenic	Klp59C -	chr2R_36_23120001	chr2R_23120001	0.56	RAL-40
224	chr2R	23239527	23239630	jockey	4670	4988	23	103	'16-7	49.68	4.7	4.0	intergenic	not near genes	chr2R_23_23235001	chr2R_23235001	0.70	RAL-40
225	chr2R	23270364	23270477	412	9	494	41	113	'24-17	65.58	1.4	17.1	intergenic	CG13540 +	chr2R_41_23270001	chr2R_23270001	0.59	RAL-40
226	chr2R	23474467	23474564	hobo	9	2928	31	97	'21-10	63.59	12.2	2.3	intron	CG43795 +	chr2R_31_23470001	chr2R_23470001	0.68	RAL-40
227	chr2R	23617703	23617746	jockey	4990	4947	22	43	'8-14	59.62	7.2	2.7	intergenic	not near genes	chr2R_22_23615001	chr2R_23615001	0.36	RAL-40
228	chr2R	23672061	23672160	hobo	2934	14	21	99	'8-13	64.61	6.2	2.9	exon	Pde8 +	chr2R_21_23670001	chr2R_23670001	0.38	RAL-40
229	chr2R	24166934	24167055	Transpac	310	1	35	121	'11-24	66.63	10.3	3.1	intron	CG3328 +	chr2R_35_24165001	chr2R_24165001	0.31	RAL-40
230	chr2R	24504408	24504531	opus	498	111	24	123	'17-7	67.16	7.8	2.7	intergenic	not near genes	chr2R_24_24500001	chr2R_24500001	0.71	RAL-40
231	chr2R	24656224	24656306	hobo	2928	2	13	82	'6-7	64.91	5.6	2.0	intergenic	not near genes	chr2R_13_24655001	chr2R_24655001	0.46	RAL-40
232	chr3L	27589	27630	INE-1	577	563	14	41	'10-4	60.80	14.0	0.9	intergenic	not near genes	chr3L_14_25001	chr3L_25001	0.71	RAL-40
233	chr3L	109731	109845	pogo	5	2097	28	114	'16-12	67.28	7.9	3.1	intergenic	not near genes	chr3L_28_105001	chr3L_105001	0.57	RAL-40
234	chr3L	132331	132436	Tirant	394	9	23	105	'17-6	66.59	7.3	2.8	intron	Pdk1 +	chr3L_23_130001	chr3L_130001	0.74	RAL-40
235	chr3L	459258	459376	pogo	2098	2	28	118	'14-14	70.05	11.3	2.3	intron	klar -	chr3L_28_455001	chr3L_455001	0.50	RAL-40
236	chr3L	504635	504736	FB	12	4	37	101	'19-18	62.46	8.7	3.8	intron	klar -	chr3L_37_500001	chr3L_500001	0.51	RAL-40
237	chr3L	792031	792131	mdg1	2	7441	38	100	'19-19	67.61	7.7	4.4	intergenic	not near genes	chr3L_38_790001	chr3L_790001	0.50	RAL-40
238	chr3L	1352463	1352503	jockey	4945	4988	15	40	'6-9	63.86	8.4	1.6	intron,3` UTR	Ptp61F -,312 +	chr3L_15_1350001	chr3L_1350001	0.40	RAL-40
239	chr3L	1884885	1884983	P-element	2	12	47	98	'21-26	42.39	10.0	4.3	5` UTR	Aprt -	chr3L_47_1880001	chr3L_1880001	0.45	RAL-40
240	chr3L	2176072	2176201	pogo	5	2097	22	129	'14-8	61.67	4.4	4.1	intergenic	not near genes	chr3L_22_2175001	chr3L_2175001	0.64	RAL-40
241	chr3L	2331065	2331183	pogo	2099	4	19	118	'14-5	62.28	10.0	1.7	intron	MsR1 +	chr3L_19_2330001	chr3L_2330001	0.74	RAL-40
242	chr3L	2353208	2353324	Stalker2	401	7250	47	116	'20-27	63.37	11.3	3.8	intergenic	not near genes	chr3L_47_2350001	chr3L_2350001	0.43	RAL-40
243	chr3L	2485905	2485967	jockey	4990	9	14	62	'8-6	57.46	8.9	1.4	intron	CG45186 +	chr3L_14_2485001	chr3L_2485001	0.57	RAL-40
244	chr3L	2520308	2520421	Tabor	484	6	36	113	'12-24	65.28	8.9	3.6	intron	Spn -	chr3L_36_2520001	chr3L_2520001	0.33	RAL-40
245	chr3L	3107929	3108033	Ivk	5368	5296	22	104	'15-7	65.11	4.3	4.2	intergenic	not near genes	chr3L_22_3105001	chr3L_3105001	0.68	RAL-40
246	chr3L	3778667	3778775	FB	2	11	26	108	'16-10	55.78	3.5	5.8	intron	CG32264 -	chr3L_26_3775001	chr3L_3775001	0.62	RAL-40
247	chr3L	4026336	4026461	flea	4755	257	34	125	'25-9	69.47	5.6	5.2	intergenic	CG11594 -,Gr64a +	chr3L_34_4025001	chr3L_4025001	0.74	RAL-40
248	chr3L	4572322	4572438	roo	8670	410	42	116	'15-27	64.53	6.2	5.8	intron	CG42540 +	chr3L_42_4570001	chr3L_4570001	0.36	RAL-40
249	chr3L	4618558	4618680	Stalker2	7247	403	57	122	'26-31	64.32	2.2	17.8	intron	Src64B -	chr3L_57_4615001	chr3L_4615001	0.46	RAL-40
250	chr3L	5409598	5409706	Transpac	1	297	23	108	'5-18	62.04	0.7	13.5	intergenic	not near genes	chr3L_23_5405001	chr3L_5405001	0.22	RAL-40
251	chr3L	5532918	5533037	rover	7297	2	33	119	'27-6	68.35	8.4	3.5	intergenic	not near genes	chr3L_33_5530001	chr3L_5530001	0.82	RAL-40
252	chr3L	5699828	5699932	blood	7012	361	34	104	'17-17	66.16	9.0	3.4	intron	sif +	chr3L_34_5695001	chr3L_5695001	0.50	RAL-40
253	chr3L	5918992	5919110	Bari1	1707	2	28	118	'18-10	66.09	9.6	2.6	intron,5` UTR	CG10483 -,CR45167 +	chr3L_28_5915001	chr3L_5915001	0.64	RAL-40
254	chr3L	6540536	6540645	hobo	2938	8	28	109	'13-15	63.82	9.8	2.6	intron	sfl +	chr3L_28_6540001	chr3L_6540001	0.46	RAL-40
255	chr3L	6985698	6985736	F-element	16	28	18	38	'10-8	59.63	11.2	1.5	intergenic	not near genes	chr3L_18_6985001	chr3L_6985001	0.56	RAL-40
256	chr3L	7619595	7619759	transib4	2282	2279	5	164	'3-2	70.74	1.3	2.2	intron	CG33275 +	chr3L_5_7615001	chr3L_7615001	0.60	RAL-40
257	chr3L	7874994	7875112	roo	8666	410	23	118	'9-14	70.44	4.7	4.0	intron	CG32365 +	chr3L_23_7870001	chr3L_7870001	0.39	RAL-40
258	chr3L	8366458	8366573	412	7545	4	47	115	'27-20	62.90	11.4	3.8	intergenic	not near genes	chr3L_47_8365001	chr3L_8365001	0.57	RAL-40
259	chr3L	8366976	8367091	pogo	3	2095	17	115	'11-6	66.60	9.6	1.6	intergenic	not near genes	chr3L_17_8365001	chr3L_8365001	0.65	RAL-40
260	chr3L	8523562	8523675	roo	6	9070	50	113	'22-28	68.22	8.9	5.1	intergenic	GstO2 -,GstO1 -	chr3L_50_8520001	chr3L_8520001	0.44	RAL-40
261	chr3L	8772867	8772977	FB	1	3	18	110	'11-7	64.94	8.4	1.9	intron	Fhos +	chr3L_18_8770001	chr3L_8770001	0.61	RAL-40
262	chr3L	9822213	9822324	pogo	2100	1	27	111	'9-18	63.27	6.0	3.9	intron	CG43897 +	chr3L_27_9820001	chr3L_9820001	0.33	RAL-40
263	chr3L	9917569	9917687	copia	255	2	50	118	'14-36	67.70	9.8	4.6	intron	CG34356 +	chr3L_50_9915001	chr3L_9915001	0.28	RAL-40
264	chr3L	9964057	9964166	Quasimodo	4	7357	10	109	'4-6	68.86	8.2	1.1	intron	CG34356 +	chr3L_10_9960001	chr3L_9960001	0.40	RAL-40
265	chr3L	10174380	10174471	Juan	4024	4196	32	91	'18-14	64.97	10.0	2.9	intron	dpr10 -	chr3L_32_10170001	chr3L_10170001	0.56	RAL-40
266	chr3L	10475978	10476073	FB	10	1	36	95	'19-17	66.52	10.1	3.2	intergenic	not near genes	chr3L_36_10475001	chr3L_10475001	0.53	RAL-40
267	chr3L	10545746	10545847	copia	4868	236	30	101	'17-13	62.47	6.6	3.9	intron	A2bp1 +	chr3L_30_10545001	chr3L_10545001	0.57	RAL-40
268	chr3L	11186316	11186430	412	13	499	30	114	'19-11	60.67	6.0	4.3	intron	GlcAT-P -	chr3L_30_11185001	chr3L_11185001	0.63	RAL-40
269	chr3L	11366133	11366178	jockey	4675	4669	14	45	'5-9	64.99	12.3	1.1	intergenic	CR45036 +	chr3L_14_11365001	chr3L_11365001	0.36	RAL-40
270	chr3L	11424886	11424989	roo	391	8663	20	103	'9-11	64.42	4.2	3.8	intergenic	CG7560 +	chr3L_20_11420001	chr3L_11420001	0.45	RAL-40
271	chr3L	11516593	11516712	roo	2	409	44	119	'27-17	65.89	9.4	4.2	intron	CG7512 +	chr3L_44_11515001	chr3L_11515001	0.61	RAL-40
272	chr3L	11536891	11536938	jockey	8	56	12	47	'7-5	61.91	9.0	1.2	intron	Mob2 -	chr3L_12_11535001	chr3L_11535001	0.58	RAL-40
273	chr3L	11907878	11907971	I-element	5011	5347	10	93	'6-4	44.78	4.8	1.7	intron	CG44837 -	chr3L_10_11905001	chr3L_11905001	0.60	RAL-40
274	chr3L	12189877	12189955	hobo	7	2911	16	78	'13-3	62.30	9.6	1.5	exon	Est-6 +	chr3L_16_12185001	chr3L_12185001	0.81	RAL-40
275	chr3L	12222844	12222926	S-element	1675	1	8	82	'6-2	71.43	7.8	0.9	intron	app -	chr3L_8_12220001	chr3L_12220001	0.75	RAL-40
276	chr3L	12318225	12318333	pogo	1	2086	29	108	'20-9	62.21	9.7	2.7	intergenic	not near genes	chr3L_29_12315001	chr3L_12315001	0.69	RAL-40
277	chr3L	12385771	12385863	I-element	5242	5343	38	92	'25-13	63.97	5.6	5.8	intron	Ncc69 -	chr3L_38_12385001	chr3L_12385001	0.66	RAL-40
278	chr3L	13365875	13365961	jockey	4986	4712	35	86	'17-18	63.51	11.5	2.8	intergenic	not near genes	chr3L_35_13365001	chr3L_13365001	0.49	RAL-40
279	chr3L	13619714	13619835	opus	497	7116	36	121	'18-18	66.77	7.4	4.3	intron	bru-3 -	chr3L_36_13615001	chr3L_13615001	0.50	RAL-40
280	chr3L	13646116	13646160	hobo	2934	2896	9	44	'7-2	64.78	11.9	0.7	intron	bru-3 -	chr3L_9_13645001	chr3L_13645001	0.78	RAL-40
281	chr3L	13652602	13652653	hobo	20	2911	7	51	'6-1	58.94	5.9	1.0	intron	bru-3 -	chr3L_7_13650001	chr3L_13650001	0.86	RAL-40
282	chr3L	13688712	13688829	Stalker4	1	406	33	117	'9-24	64.15	7.7	3.8	intron	bru-3 -	chr3L_33_13685001	chr3L_13685001	0.27	RAL-40
283	chr3L	13688720	13688786	Stalker	9	7212	12	66	'7-5	68.22	7.5	1.4	intron	bru-3 -	chr3L_12_13685001	chr3L_13685001	0.58	RAL-40
284	chr3L	13993445	13993524	P-element	12	2872	28	79	'15-13	43.61	8.8	2.9	intergenic	CG17364 -	chr3L_28_13990001	chr3L_13990001	0.54	RAL-40
285	chr3L	14396954	14397027	BS	4992	5053	14	73	'10-4	59.96	0.4	10.0	intergenic	not near genes	chr3L_14_14395001	chr3L_14395001	0.71	RAL-40
286	chr3L	14603349	14603394	jockey	11	57	14	45	'4-10	64.11	14.2	0.9	intergenic	not near genes	chr3L_14_14600001	chr3L_14600001	0.29	RAL-40
287	chr3L	14714947	14715070	Max-element	302	8234	39	123	'15-24	64.63	9.6	3.7	intron	ome +	chr3L_39_14710001	chr3L_14710001	0.38	RAL-40
288	chr3L	15026652	15026680	roo	409	9044	11	28	'6-5	56.81	1.5	4.4	intron	Sytbeta -	chr3L_11_15025001	chr3L_15025001	0.55	RAL-40
289	chr3L	15099556	15099641	G4	3817	3804	18	85	'7-11	48.86	8.3	1.9	intron	CTPsyn +	chr3L_18_15095001	chr3L_15095001	0.39	RAL-40
290	chr3L	15494640	15494759	S-element	1712	1715	24	119	'8-16	63.91	7.9	2.7	intron	CG12355 -	chr3L_24_15490001	chr3L_15490001	0.33	RAL-40
291	chr3L	15614476	15614530	jockey	32	5	16	54	'9-7	61.46	7.9	1.8	intron	comm3 -	chr3L_16_15610001	chr3L_15610001	0.56	RAL-40
292	chr3L	15652138	15652242	I-element	5348	3	42	104	'20-22	63.67	9.3	4.1	intron	Eig71Ec -	chr3L_42_15650001	chr3L_15650001	0.48	RAL-40
293	chr3L	16242551	16242599	jockey	4673	4701	17	48	'4-13	66.07	8.6	1.8	intergenic	not near genes	chr3L_17_16240001	chr3L_16240001	0.24	RAL-40
294	chr3L	16371447	16371561	1360	3388	3387	36	114	'14-22	66.81	9.8	3.3	3` UTR	roq -	chr3L_36_16370001	chr3L_16370001	0.39	RAL-40
295	chr3L	16371532	16371564	Tc3	312	312	4	32	'1-3	75.56	12.4	0.3	3` UTR	roq -	chr3L_4_16370001	chr3L_16370001	0.25	RAL-40
296	chr3L	16564913	16565023	297	2	384	16	110	'7-9	67.23	9.6	1.5	exon	Mipp1 -	chr3L_16_16560001	chr3L_16560001	0.44	RAL-40
297	chr3L	16566773	16566888	roo	403	8664	43	115	'18-25	67.86	10.5	3.7	intron,5` UTR	Mipp1 -,CG43206 +	chr3L_43_16565001	chr3L_16565001	0.42	RAL-40
298	chr3L	16756312	16756354	X-element	4711	4669	17	42	'8-9	63.31	5.0	2.8	intergenic	not near genes	chr3L_17_16755001	chr3L_16755001	0.47	RAL-40
299	chr3L	16891107	16891188	P-element	17	9	17	81	'6-11	40.30	8.0	1.9	intron	Lmpt +	chr3L_17_16890001	chr3L_16890001	0.35	RAL-40
300	chr3L	17256119	17256170	pogo	2100	2100	18	51	'8-10	66.47	8.2	2.0	intron	CR43870 +	chr3L_18_17255001	chr3L_17255001	0.44	RAL-40
301	chr3L	17503195	17503230	pogo	45	10	21	35	'11-10	61.75	8.5	2.2	intron	Oatp74D +	chr3L_21_17500001	chr3L_17500001	0.52	RAL-40
302	chr3L	17570626	17570745	Transpac	4921	5228	45	119	'28-17	65.93	7.9	5.1	intron	Eip74EF -	chr3L_45_17570001	chr3L_17570001	0.62	RAL-40
303	chr3L	17628319	17628437	roo	407	8665	43	118	'15-28	69.97	10.8	3.6	exon	CG7510 +	chr3L_43_17625001	chr3L_17625001	0.35	RAL-40
304	chr3L	17687864	17688005	X-element	22	4698	13	141	'8-5	43.86	12.0	1.0	intergenic	not near genes	chr3L_13_17685001	chr3L_17685001	0.62	RAL-40
305	chr3L	17692352	17692391	F-element	4310	4270	20	39	'12-8	61.29	11.3	1.6	intron	Ccn +	chr3L_20_17690001	chr3L_17690001	0.60	RAL-40
306	chr3L	17898676	17898723	jockey	4760	4807	22	47	'9-13	66.88	8.4	2.3	intergenic	Prestin -	chr3L_22_17895001	chr3L_17895001	0.41	RAL-40
307	chr3L	17936967	17937015	jockey	33	12	19	48	'8-11	62.07	14.5	1.2	intron	CG43174 +	chr3L_19_17935001	chr3L_17935001	0.42	RAL-40
308	chr3L	18391925	18392018	hobo	2929	15	17	93	'4-13	63.94	7.9	1.9	intergenic	not near genes	chr3L_17_18390001	chr3L_18390001	0.24	RAL-40
309	chr3L	18451301	18451417	hobo	1	2938	23	116	'18-5	64.37	8.5	2.4	intergenic	not near genes	chr3L_23_18450001	chr3L_18450001	0.78	RAL-40
310	chr3L	18548527	18548562	hobo	2925	2896	7	35	'2-5	63.32	13.4	0.5	intergenic	not near genes	chr3L_7_18545001	chr3L_18545001	0.29	RAL-40
311	chr3L	18553225	18553270	hobo	47	2	17	45	'9-8	66.37	7.5	2.0	intergenic	not near genes	chr3L_17_18550001	chr3L_18550001	0.53	RAL-40
312	chr3L	18757019	18757134	S-element	1708	1715	18	115	'6-12	68.43	6.3	2.5	intron	ftz-f1 -	chr3L_18_18755001	chr3L_18755001	0.33	RAL-40
313	chr3L	18816401	18816523	S-element	1	1715	27	122	'14-13	68.12	7.5	3.2	intron	CG14073 -	chr3L_27_18815001	chr3L_18815001	0.52	RAL-40
314	chr3L	18935758	18935837	Juan	3996	4207	25	79	'20-5	59.16	5.6	3.8	intron	CG32204 -	chr3L_25_18935001	chr3L_18935001	0.80	RAL-40
315	chr3L	19339396	19339445	Tc1	17	4	19	49	'7-12	63.51	9.8	1.8	intergenic	not near genes	chr3L_19_19335001	chr3L_19335001	0.37	RAL-40
316	chr3L	19349923	19350018	1360	2	3201	31	95	'18-13	58.13	10.1	2.8	intron	CG32206 -	chr3L_31_19345001	chr3L_19345001	0.58	RAL-40
317	chr3L	19483233	19483285	jockey	4691	4667	23	52	'12-11	62.32	10.1	2.1	intergenic	not near genes	chr3L_23_19480001	chr3L_19480001	0.52	RAL-40
318	chr3L	19788105	19788208	FB	6	5	19	103	'5-14	66.23	12.5	1.4	intron,intron	CG42637 -,Gyc76C -	chr3L_19_19785001	chr3L_19785001	0.26	RAL-40
319	chr3L	19867312	19867419	roo	406	8675	48	107	'31-17	68.55	11.4	3.9	intergenic	Rab8 -	chr3L_48_19865001	chr3L_19865001	0.65	RAL-40
320	chr3L	20104810	20104922	hobo	1	2934	23	112	'18-5	67.19	7.7	2.6	5` UTR	CR44679 +	chr3L_23_20100001	chr3L_20100001	0.78	RAL-40
321	chr3L	20187370	20187419	FB	474	860	18	49	'8-10	65.88	24.8	0.7	intron	CG42674 -	chr3L_18_20185001	chr3L_20185001	0.44	RAL-40
322	chr3L	20194309	20194415	FB	5	6	32	106	'16-16	65.14	11.2	2.6	intron	CG42674 -	chr3L_32_20190001	chr3L_20190001	0.50	RAL-40
323	chr3L	20272007	20272124	pogo	2099	5	29	117	'15-14	68.87	7.6	3.4	intron	gogo -	chr3L_29_20270001	chr3L_20270001	0.52	RAL-40
324	chr3L	20427963	20428081	297	6972	6580	23	118	'18-5	68.29	9.7	2.1	3` UTR	CG5262 -	chr3L_23_20425001	chr3L_20425001	0.78	RAL-40
325	chr3L	20441759	20441866	P-element	1	2884	26	107	'12-14	50.10	9.1	2.6	intergenic	not near genes	chr3L_26_20440001	chr3L_20440001	0.46	RAL-40
326	chr3L	20547659	20547777	roo	8666	411	39	118	'18-21	65.08	9.6	3.7	intergenic	not near genes	chr3L_39_20545001	chr3L_20545001	0.46	RAL-40
327	chr3L	20652481	20652542	roo	394	8700	14	61	'10-4	69.44	1.8	5.0	intergenic	CR44685 +	chr3L_14_20650001	chr3L_20650001	0.71	RAL-40
328	chr3L	20737464	20737580	HMS-Beagle2	7192	6885	30	116	'12-18	62.88	8.3	3.2	exon	CG13252 +	chr3L_30_20735001	chr3L_20735001	0.40	RAL-40
329	chr3L	20766033	20766148	roo	405	2	39	115	'19-20	68.96	8.4	4.1	intergenic	not near genes	chr3L_39_20765001	chr3L_20765001	0.49	RAL-40
330	chr3L	20866957	20866989	jockey	4603	4569	6	32	'2-4	63.79	10.7	0.5	intron	CG32432 -	chr3L_6_20865001	chr3L_20865001	0.33	RAL-40
331	chr3L	20875134	20875223	hopper	1388	1411	18	89	'7-11	69.18	5.8	2.6	intron	CG32432 -	chr3L_18_20875001	chr3L_20875001	0.39	RAL-40
332	chr3L	20895086	20895136	F-element	4674	4669	16	50	'7-9	67.32	14.3	1.0	intergenic	not near genes	chr3L_16_20895001	chr3L_20895001	0.44	RAL-40
333	chr3L	21052725	21052802	copia	210	4867	25	77	'6-19	66.87	8.9	2.5	intron	siz +	chr3L_25_21050001	chr3L_21050001	0.24	RAL-40
334	chr3L	21136547	21136590	G-element	221	225	7	43	'4-3	62.74	15.5	0.4	3` UTR	Ac78C -	chr3L_7_21135001	chr3L_21135001	0.57	RAL-40
335	chr3L	21145345	21145370	BS	5057	5082	11	25	'5-6	59.68	9.9	1.0	intron	Ac78C -	chr3L_11_21145001	chr3L_21145001	0.45	RAL-40
336	chr3L	21145701	21145730	INE-1	556	568	7	29	'3-4	59.76	10.2	0.6	intron	Ac78C -	chr3L_7_21145001	chr3L_21145001	0.43	RAL-40
337	chr3L	21324267	21324379	hobo	2	2935	27	112	'21-6	63.99	10.8	2.3	intron	Rab26 +	chr3L_27_21320001	chr3L_21320001	0.78	RAL-40
338	chr3L	21874447	21874497	jockey	4720	4670	21	50	'10-11	65.15	13.3	1.5	intron	mub +	chr3L_21_21870001	chr3L_21870001	0.48	RAL-40
339	chr3L	21906172	21906212	jockey	5	35	25	40	'17-8	63.02	15.1	1.6	intron	mub +	chr3L_25_21905001	chr3L_21905001	0.68	RAL-40
340	chr3L	22106718	22106809	Quasimodo	18	7355	11	91	'7-4	67.49	5.5	1.7	intergenic	not near genes	chr3L_11_22105001	chr3L_22105001	0.64	RAL-40
341	chr3L	22111059	22111172	Burdock	246	6135	41	113	'18-23	63.58	12.2	3.1	intergenic	not near genes	chr3L_41_22110001	chr3L_22110001	0.44	RAL-40
342	chr3L	22346959	22347002	hopper	1369	1	8	43	'6-2	66.40	8.6	0.8	intron	Ten-m -	chr3L_8_22345001	chr3L_22345001	0.75	RAL-40
343	chr3L	22399754	22399819	FB	40	12	21	65	'7-14	65.83	6.3	2.9	intron	Ten-m -	chr3L_21_22395001	chr3L_22395001	0.33	RAL-40
344	chr3L	22635672	22635778	hopper	1412	1409	32	106	'17-15	61.18	8.2	3.5	intron	CG14459 -	chr3L_32_22635001	chr3L_22635001	0.53	RAL-40
345	chr3L	22700423	22700530	pogo	13	2097	21	107	'6-15	58.88	9.2	2.1	intergenic	not near genes	chr3L_21_22700001	chr3L_22700001	0.29	RAL-40
346	chr3L	22744678	22744720	FB	34	15	21	42	'13-8	75.31	6.7	2.7	intron	CG7369 +	chr3L_21_22740001	chr3L_22740001	0.62	RAL-40
347	chr3L	22848540	22848591	INE-1	542	576	6	51	'1-5	72.88	15.7	0.4	intergenic	not near genes	chr3L_6_22845001	chr3L_22845001	0.17	RAL-40
348	chr3L	22938210	22938323	blood	7017	7387	52	113	'23-29	63.03	7.7	6.0	intergenic	not near genes	chr3L_52_22935001	chr3L_22935001	0.44	RAL-40
349	chr3L	23146471	23146514	1360	3379	53	31	43	'10-21	65.35	19.6	1.5	intergenic	not near genes	chr3L_31_23145001	chr3L_23145001	0.32	RAL-40
350	chr3L	23205857	23205974	S-element	1712	3	20	117	'6-14	68.36	6.4	2.7	intergenic	not near genes	chr3L_20_23205001	chr3L_23205001	0.30	RAL-40
351	chr3L	23354607	23354652	gypsy2	1	6534	19	45	'4-15	67.34	12.3	1.4	intergenic	not near genes	chr3L_19_23350001	chr3L_23350001	0.21	RAL-40
352	chr3L	23460033	23460074	Rt1b	4795	4754	11	41	'4-7	64.06	6.2	1.5	intergenic	not near genes	chr3L_11_23460001	chr3L_23460001	0.36	RAL-40
353	chr3L	23690253	23690290	Stalker2	404	390	13	37	'8-5	66.35	12.0	1.0	intergenic	CR45174 -	chr3L_13_23690001	chr3L_23690001	0.62	RAL-40
354	chr3L	23748939	23749043	flea	243	4762	25	104	'15-10	66.29	7.3	3.0	3` UTR	CG17698 +	chr3L_25_23745001	chr3L_23745001	0.60	RAL-40
355	chr3L	23795810	23795926	mdg1	7042	7458	35	116	'10-25	67.07	5.6	5.3	intergenic	not near genes	chr3L_35_23795001	chr3L_23795001	0.29	RAL-40
356	chr3L	24123283	24123308	GATE	32	8267	7	25	'2-5	58.27	9.9	0.6	intron	Snap25 +	chr3L_7_24120001	chr3L_24120001	0.29	RAL-40
357	chr3L	24995601	24995695	pogo	2090	19	26	94	'18-8	64.49	9.9	2.4	intergenic	not near genes	chr3L_26_24995001	chr3L_24995001	0.69	RAL-40
358	chr3L	25232763	25232861	accord2	195	15	10	98	'8-2	60.98	12.1	0.8	intergenic	not near genes	chr3L_10_25230001	chr3L_25230001	0.80	RAL-40
359	chr3L	25272525	25272576	1360	3381	85	14	51	'10-4	69.04	7.4	1.7	intron	CG40467 -	chr3L_14_25270001	chr3L_25270001	0.71	RAL-40
360	chr3L	26719134	26719164	Tc1-2	4	31	11	30	'6-5	60.22	11.5	0.9	intergenic	not near genes	chr3L_11_26715001	chr3L_26715001	0.55	RAL-40
361	chr3L	27356068	27356107	Tc3	1700	1661	12	39	'9-3	71.83	15.3	0.7	intron	Dbp80 +	chr3L_12_27355001	chr3L_27355001	0.75	RAL-40
362	chr3L	27415220	27415319	transib2	2809	6	26	99	'12-14	63.54	10.3	2.3	intron	Dbp80 +	chr3L_26_27415001	chr3L_27415001	0.46	RAL-40
363	chr3R	444907	444938	1360	3282	3313	5	31	'4-1	70.70	22.2	0.2	intergenic	not near genes	chr3R_5_440001	chr3R_440001	0.80	RAL-40
364	chr3R	723153	723201	gypsy6	104	57	13	48	'6-7	64.24	3.2	3.1	intergenic	not near genes	chr3R_13_720001	chr3R_720001	0.46	RAL-40
365	chr3R	1168094	1168167	opus	7489	7153	8	73	'5-3	68.66	15.8	0.5	intron	CG15831 +	chr3R_8_1165001	chr3R_1165001	0.62	RAL-40
366	chr3R	1961601	1961641	HMS-Beagle2	7	6930	10	40	'5-5	69.70	12.4	0.7	intergenic	CG40204 +	chr3R_10_1960001	chr3R_1960001	0.50	RAL-40
367	chr3R	2474276	2474335	Juan	4211	4010	8	59	'5-3	62.81	16.7	0.5	intergenic	not near genes	chr3R_8_2470001	chr3R_2470001	0.62	RAL-40
368	chr3R	2999736	2999857	McClintock	480	2	26	121	'12-14	67.92	4.4	4.8	intron	CG42618 -	chr3R_26_2995001	chr3R_2995001	0.46	RAL-40
369	chr3R	3628839	3628868	roo	358	9051	9	29	'3-6	63.74	50.1	0.2	intergenic	not near genes	chr3R_9_3625001	chr3R_3625001	0.33	RAL-40
370	chr3R	3920516	3920625	copia	248	4	36	109	'14-22	67.44	8.6	3.8	intergenic	not near genes	chr3R_36_3920001	chr3R_3920001	0.39	RAL-40
371	chr3R	4085661	4085702	17.6	490	449	21	41	'9-12	67.13	11.0	1.8	intron	CG42402 +	chr3R_21_4085001	chr3R_4085001	0.43	RAL-40
372	chr3R	4194270	4194387	17.6	2	490	33	117	'13-20	67.82	9.1	3.3	intergenic	not near genes	chr3R_33_4190001	chr3R_4190001	0.39	RAL-40
373	chr3R	4327740	4327842	roo	9053	8664	52	102	'15-37	66.84	8.8	5.3	intergenic	CG9776 -	chr3R_52_4325001	chr3R_4325001	0.29	RAL-40
374	chr3R	4679443	4679560	hopper	3	1414	21	117	'17-4	64.97	8.8	2.1	intron	CG43427 +	chr3R_21_4675001	chr3R_4675001	0.81	RAL-40
375	chr3R	4962835	4962880	jockey	4674	4718	18	45	'3-15	69.92	8.1	2.0	intergenic	not near genes	chr3R_18_4960001	chr3R_4960001	0.17	RAL-40
376	chr3R	5149434	5149470	pogo	10	46	19	36	'11-8	63.68	11.6	1.5	intergenic	not near genes	chr3R_19_5145001	chr3R_5145001	0.58	RAL-40
377	chr3R	5169359	5169404	Tc1	1598	1643	16	45	'8-8	66.17	7.0	2.0	intron	dpr16 +	chr3R_16_5165001	chr3R_5165001	0.50	RAL-40
378	chr3R	5210991	5211107	pogo	2096	3	26	116	'17-9	66.96	10.5	2.3	intron	cno -	chr3R_26_5210001	chr3R_5210001	0.65	RAL-40
379	chr3R	5493466	5493572	297	6589	6967	20	106	'6-14	65.81	9.1	2.0	exon	CG31547 -	chr3R_20_5490001	chr3R_5490001	0.30	RAL-40
380	chr3R	5508940	5509049	17.6	492	6940	29	109	'17-12	65.81	11.7	2.3	3` UTR	Nmdar1 -	chr3R_29_5505001	chr3R_5505001	0.59	RAL-40
381	chr3R	5873258	5873341	hopper	1414	2	13	83	'9-4	64.08	7.9	1.5	intron	CG34113 -	chr3R_13_5870001	chr3R_5870001	0.69	RAL-40
382	chr3R	6195302	6195416	copia	254	5	43	114	'15-28	68.50	11.4	3.5	3` UTR	NPFR +	chr3R_43_6195001	chr3R_6195001	0.35	RAL-40
383	chr3R	6245756	6245835	mdg1	385	6	22	79	'11-11	70.62	8.0	2.4	intergenic	not near genes	chr3R_22_6245001	chr3R_6245001	0.50	RAL-40
384	chr3R	6407728	6407838	Tirant	8505	8108	31	110	'25-6	65.57	11.9	2.4	5` UTR	gpp +	chr3R_31_6405001	chr3R_6405001	0.81	RAL-40
385	chr3R	6687997	6688252	mdg1	47	7085	4	255	'3-1	73.95	3.0	1.0	3` UTR	Ccp84Ag +	chr3R_4_6685001	chr3R_6685001	0.75	RAL-40
386	chr3R	6884874	6884922	F-element	11	42	16	48	'9-7	70.12	11.5	1.3	intron	CR44931 -	chr3R_16_6880001	chr3R_6880001	0.56	RAL-40
387	chr3R	6966449	6966531	pogo	2088	2	18	82	'3-15	61.17	7.1	2.2	intron	Antp -	chr3R_18_6965001	chr3R_6965001	0.17	RAL-40
388	chr3R	7466452	7466558	412	492	14	33	106	'17-16	65.25	11.5	2.6	intergenic	not near genes	chr3R_33_7465001	chr3R_7465001	0.52	RAL-40
389	chr3R	7477447	7477497	BS	5045	4995	18	50	'8-10	65.29	9.1	1.8	intergenic	not near genes	chr3R_18_7475001	chr3R_7475001	0.44	RAL-40
390	chr3R	7541456	7541524	Tc3	312	309	5	68	'1-4	50.32	8.8	0.5	intron	alpha-Est3 -	chr3R_5_7540001	chr3R_7540001	0.20	RAL-40
391	chr3R	7793154	7793250	flea	5007	4774	24	96	'8-16	67.49	6.2	3.3	3` UTR	CG10086 +	chr3R_24_7790001	chr3R_7790001	0.33	RAL-40
392	chr3R	7967512	7967564	jockey	4608	4660	27	52	'17-10	63.91	17.0	1.5	intergenic	dsx -	chr3R_27_7965001	chr3R_7965001	0.63	RAL-40
393	chr3R	8313159	8313247	P-element	3	2865	14	88	'12-2	52.05	7.9	1.6	intergenic	eIF4AIII +,CG11698 +	chr3R_14_8310001	chr3R_8310001	0.86	RAL-40
394	chr3R	8400788	8400879	I-element	5346	10	37	91	'14-23	62.42	9.7	3.5	intron	CG45263 -	chr3R_37_8400001	chr3R_8400001	0.38	RAL-40
395	chr3R	8587077	8587126	F-element	23	9	17	49	'10-7	57.61	10.6	1.5	intron	5-HT2B +	chr3R_17_8585001	chr3R_8585001	0.59	RAL-40
396	chr3R	9003716	9003829	Max-element	8235	293	26	113	'17-9	62.26	10.9	2.2	intergenic	CG31100 -,CG11980 +	chr3R_26_9000001	chr3R_9000001	0.65	RAL-40
397	chr3R	9032547	9032667	pogo	2100	3	35	120	'18-17	67.21	10.0	3.2	intron	neur -	chr3R_35_9030001	chr3R_9030001	0.51	RAL-40
398	chr3R	9192493	9192612	invader3	5192	279	52	119	'21-31	65.12	9.5	5.0	intron	pum -	chr3R_52_9190001	chr3R_9190001	0.40	RAL-40
399	chr3R	9278770	9278817	I-element	5308	5155	19	47	'5-14	62.82	2.7	5.1	intergenic	not near genes	chr3R_19_9275001	chr3R_9275001	0.26	RAL-40
400	chr3R	9293177	9293292	297	6583	391	15	115	'11-4	67.91	7.6	1.7	intergenic	CG8861 -	chr3R_15_9290001	chr3R_9290001	0.73	RAL-40
401	chr3R	9571910	9572010	mdg1	7442	3	43	100	'19-24	63.63	8.8	4.4	3` UTR	CG9399 -	chr3R_43_9570001	chr3R_9570001	0.44	RAL-40
402	chr3R	9888834	9888951	pogo	2096	2	40	117	'16-24	67.46	11.0	3.3	intron	Glut4EF +	chr3R_40_9885001	chr3R_9885001	0.40	RAL-40
403	chr3R	9907781	9907894	roo	408	7	45	113	'25-20	66.47	9.5	4.3	intron	Glut4EF +	chr3R_45_9905001	chr3R_9905001	0.56	RAL-40
404	chr3R	10030703	10030800	BS	5079	5004	44	97	'20-24	61.92	9.8	4.1	intron	Mical -	chr3R_44_10030001	chr3R_10030001	0.45	RAL-40
405	chr3R	10355845	10355967	S-element	1715	1	21	122	'11-10	67.72	7.2	2.6	intron	jumu +	chr3R_21_10355001	chr3R_10355001	0.52	RAL-40
406	chr3R	10741074	10741137	1360	5	3364	17	63	'15-2	62.44	13.3	1.2	intron	TkR86C -	chr3R_17_10740001	chr3R_10740001	0.88	RAL-40
407	chr3R	10954572	10954682	412	485	3	28	110	'12-16	64.54	7.7	3.2	intergenic	not near genes	chr3R_28_10950001	chr3R_10950001	0.43	RAL-40
408	chr3R	11004027	11004104	297	6580	393	20	77	'9-11	54.27	6.6	2.6	intron	CG34114 +	chr3R_20_11000001	chr3R_11000001	0.45	RAL-40
409	chr3R	11173230	11173349	mdg1	7458	1	34	119	'24-10	66.31	10.0	3.1	intergenic	Ugt86Dj -	chr3R_34_11170001	chr3R_11170001	0.71	RAL-40
410	chr3R	11261139	11261258	412	3	7545	14	119	'2-12	66.55	7.5	1.6	intergenic	not near genes	chr3R_14_11260001	chr3R_11260001	0.14	RAL-40
411	chr3R	11340792	11340831	jockey	4706	4667	18	39	'10-8	64.52	9.2	1.8	intron	pros +	chr3R_18_11340001	chr3R_11340001	0.56	RAL-40
412	chr3R	11933717	11933821	297	6589	6967	23	104	'12-11	67.98	8.1	2.5	intron	Cad87A -	chr3R_23_11930001	chr3R_11930001	0.52	RAL-40
413	chr3R	11938871	11938966	FB	2	18	21	95	'14-7	65.01	8.7	2.2	intron	Cad87A -	chr3R_21_11935001	chr3R_11935001	0.67	RAL-40
414	chr3R	11943532	11943581	F-element	58	9	22	49	'13-9	63.77	5.3	3.5	intron	Cad87A -	chr3R_22_11940001	chr3R_11940001	0.59	RAL-40
415	chr3R	11957292	11957336	S-element	32	1713	24	44	'10-14	67.70	13.0	1.7	intergenic	not near genes	chr3R_24_11955001	chr3R_11955001	0.42	RAL-40
416	chr3R	12021433	12021503	opus	485	111	19	70	'9-10	54.59	9.2	1.9	intergenic	not near genes	chr3R_19_12020001	chr3R_12020001	0.47	RAL-40
417	chr3R	12459311	12459407	412	7541	12	32	96	'13-19	62.68	9.6	3.0	exon	CG5961 -	chr3R_32_12455001	chr3R_12455001	0.41	RAL-40
418	chr3R	12786476	12786512	F-element	25	24	18	36	'9-9	63.55	12.2	1.4	intergenic	not near genes	chr3R_18_12785001	chr3R_12785001	0.50	RAL-40
419	chr3R	12824008	12824042	F-element	20	54	9	34	'5-4	59.97	12.0	0.7	intergenic	not near genes	chr3R_9_12820001	chr3R_12820001	0.56	RAL-40
420	chr3R	12876397	12876449	Doc	11	18	32	52	'8-24	68.30	14.2	2.1	intergenic	not near genes	chr3R_32_12875001	chr3R_12875001	0.25	RAL-40
421	chr3R	12949007	12949125	Burdock	6137	252	32	118	'28-4	69.41	9.8	3.0	intergenic	not near genes	chr3R_32_12945001	chr3R_12945001	0.88	RAL-40
422	chr3R	13309398	13309505	P-element	2886	2886	36	107	'24-12	50.00	9.5	3.4	intron	CG32473 +	chr3R_36_13305001	chr3R_13305001	0.67	RAL-40
423	chr3R	13349503	13349595	Ivk	5357	1	49	92	'22-27	62.93	5.6	7.4	intergenic	not near genes	chr3R_49_13345001	chr3R_13345001	0.45	RAL-40
424	chr3R	13378804	13378896	412	12	7530	27	92	'16-11	66.84	7.3	3.3	intron	CG9813 -	chr3R_27_13375001	chr3R_13375001	0.59	RAL-40
425	chr3R	14043371	14043476	I-element	5347	3	28	105	'10-18	63.79	3.6	6.1	intergenic	not near genes	chr3R_28_14040001	chr3R_14040001	0.36	RAL-40
426	chr3R	14082154	14082257	copia	4873	242	43	103	'25-18	66.24	8.4	4.6	3` UTR	foxo +	chr3R_43_14080001	chr3R_14080001	0.58	RAL-40
427	chr3R	14526916	14526960	mdg1	7456	374	28	44	'14-14	64.89	15.3	1.7	intron	Pde6 -	chr3R_28_14525001	chr3R_14525001	0.50	RAL-40
428	chr3R	14714626	14714733	flea	4756	4999	9	107	'5-4	71.95	3.5	2.0	intron	kibra -	chr3R_9_14710001	chr3R_14710001	0.56	RAL-40
429	chr3R	14849916	14850026	roo	8676	410	30	110	'12-18	64.37	6.7	3.9	intron	btsz -	chr3R_30_14845001	chr3R_14845001	0.40	RAL-40
430	chr3R	14861174	14861292	Transpac	308	4920	39	118	'21-18	68.34	13.3	2.7	intron	btsz -	chr3R_39_14860001	chr3R_14860001	0.54	RAL-40
431	chr3R	14878343	14878458	diver	226	5895	48	115	'28-20	65.21	11.7	3.8	intergenic	not near genes	chr3R_48_14875001	chr3R_14875001	0.58	RAL-40
432	chr3R	14939486	14939603	pogo	2099	5	24	117	'9-15	67.96	10.7	2.1	intergenic	not near genes	chr3R_24_14935001	chr3R_14935001	0.38	RAL-40
433	chr3R	14986186	14986235	jockey	7	57	16	49	'11-5	63.91	10.6	1.4	intergenic	not near genes	chr3R_16_14985001	chr3R_14985001	0.69	RAL-40
434	chr3R	15089734	15089855	297	394	1	40	121	'27-13	71.46	11.3	3.3	intron	CG6966 -	chr3R_40_15085001	chr3R_15085001	0.68	RAL-40
435	chr3R	15120673	15120788	roo	4	407	40	115	'21-19	68.37	11.4	3.2	intron	CG42788 -	chr3R_40_15120001	chr3R_15120001	0.53	RAL-40
436	chr3R	15197930	15198049	pogo	3	2099	31	119	'16-15	66.93	14.2	2.0	intron	CG42542 +	chr3R_31_15195001	chr3R_15195001	0.52	RAL-40
437	chr3R	15291590	15291640	P-element	2882	2835	21	50	'10-11	49.25	11.7	1.7	intron	Tm1 +	chr3R_21_15290001	chr3R_15290001	0.48	RAL-40
438	chr3R	15375933	15376044	Quasimodo	7365	8	10	111	'4-6	64.17	9.1	1.0	intron	Rbp +	chr3R_10_15375001	chr3R_15375001	0.40	RAL-40
439	chr3R	15502528	15502565	Ivk	5329	5366	8	37	'1-7	66.45	8.9	0.8	intergenic	not near genes	chr3R_8_15500001	chr3R_15500001	0.12	RAL-40
440	chr3R	15784756	15784875	HMS-Beagle	7038	247	34	119	'23-11	66.40	9.8	3.1	intergenic	not near genes	chr3R_34_15780001	chr3R_15780001	0.68	RAL-40
441	chr3R	15790055	15790098	flea	4749	4706	18	43	'14-4	68.71	32.5	0.5	exon	c(3)G -	chr3R_18_15790001	chr3R_15790001	0.78	RAL-40
442	chr3R	15814661	15814778	roo	4	409	44	117	'14-30	66.20	11.3	3.6	intron	alpha-Man-IIb +	chr3R_44_15810001	chr3R_15810001	0.32	RAL-40
443	chr3R	16110159	16110274	roo	4	407	50	115	'30-20	67.18	9.8	4.6	intergenic	not near genes	chr3R_50_16110001	chr3R_16110001	0.60	RAL-40
444	chr3R	16188904	16189012	S-element	1	1701	28	108	'14-14	66.21	7.3	3.4	intron	sra +	chr3R_28_16185001	chr3R_16185001	0.50	RAL-40
445	chr3R	16206601	16206722	roo	410	8664	37	121	'20-17	69.47	9.1	3.7	intergenic	not near genes	chr3R_37_16205001	chr3R_16205001	0.54	RAL-40
446	chr3R	16438845	16438909	roo	401	5	4	64	'1-3	64.43	12.0	0.3	exon	ema -	chr3R_4_16435001	chr3R_16435001	0.25	RAL-40
447	chr3R	16799778	16799816	X-element	4630	4617	11	38	'5-6	52.71	15.6	0.7	intergenic	not near genes	chr3R_11_16795001	chr3R_16795001	0.45	RAL-40
448	chr3R	17018690	17018771	I-element	5344	16	36	81	'14-22	67.33	9.5	3.4	intron	Pxd +	chr3R_36_17015001	chr3R_17015001	0.39	RAL-40
449	chr3R	17079374	17079439	hopper	6	1365	18	65	'13-5	66.13	9.5	1.7	intron	Keap1 -	chr3R_18_17075001	chr3R_17075001	0.72	RAL-40
450	chr3R	17109006	17109057	jockey	4721	4670	22	51	'17-5	62.83	9.0	2.2	intron	cher -	chr3R_22_17105001	chr3R_17105001	0.77	RAL-40
451	chr3R	17330712	17330805	hopper	20	1410	19	93	'6-13	61.44	6.9	2.4	intron	beat-IIa -	chr3R_19_17330001	chr3R_17330001	0.32	RAL-40
452	chr3R	17405625	17405734	1360	3	2	28	109	'20-8	64.64	8.1	3.1	intergenic	CG42824 -	chr3R_28_17405001	chr3R_17405001	0.71	RAL-40
453	chr3R	17421210	17421292	pogo	2	2057	13	82	'7-6	70.00	0.0	13.0	intergenic	CG42835 +,CG14332 -	chr3R_13_17420001	chr3R_17420001	0.54	RAL-40
454	chr3R	17627011	17627128	roo	8665	406	46	117	'27-19	69.00	7.6	5.3	intergenic	CG14325 +	chr3R_46_17625001	chr3R_17625001	0.59	RAL-40
455	chr3R	17673920	17674025	roo	397	8668	42	105	'17-25	65.87	11.3	3.4	3` UTR	alt -	chr3R_42_17670001	chr3R_17670001	0.40	RAL-40
456	chr3R	17957210	17957307	Ivk	5375	2	33	97	'9-24	60.63	8.4	3.5	intron	cpo +	chr3R_33_17955001	chr3R_17955001	0.27	RAL-40
457	chr3R	18160137	18160253	297	6580	390	34	116	'19-15	66.25	9.8	3.1	intergenic	CR45104 -	chr3R_34_18160001	chr3R_18160001	0.56	RAL-40
458	chr3R	18298585	18298701	Tirant	4	8502	30	116	'11-19	66.33	9.0	3.0	5` UTR	l(3)05822 -	chr3R_30_18295001	chr3R_18295001	0.37	RAL-40
459	chr3R	18399168	18399261	P-element	10	2879	37	93	'18-19	46.86	8.5	3.9	5` UTR,intron	Vha100-2 -,CG44009 +	chr3R_37_18395001	chr3R_18395001	0.49	RAL-40
460	chr3R	18900033	18900154	roo	408	8663	41	121	'20-21	68.39	7.0	5.1	exon	Rh2 +	chr3R_41_18900001	chr3R_18900001	0.49	RAL-40
461	chr3R	18986315	18986354	Doc	13	54	15	39	'5-10	65.45	12.9	1.1	intron	gukh +	chr3R_15_18985001	chr3R_18985001	0.33	RAL-40
462	chr3R	19434086	19434206	412	492	4	49	120	'31-18	63.55	7.8	5.6	intron	CG31221 +	chr3R_49_19430001	chr3R_19430001	0.63	RAL-40
463	chr3R	19561457	19561568	hobo	2937	5	29	111	'10-19	64.27	8.4	3.1	intron	Dys +	chr3R_29_19560001	chr3R_19560001	0.34	RAL-40
464	chr3R	19589879	19589994	hobo	2938	1	28	115	'11-17	66.99	11.8	2.2	intron	Dys +	chr3R_28_19585001	chr3R_19585001	0.39	RAL-40
465	chr3R	19860099	19860215	S-element	1709	1715	17	116	'6-11	68.54	9.0	1.7	intron	Ire1 -	chr3R_17_19860001	chr3R_19860001	0.35	RAL-40
466	chr3R	19949122	19949214	copia	30	257	32	92	'13-19	66.31	11.2	2.6	intron	Hs6st -	chr3R_32_19945001	chr3R_19945001	0.41	RAL-40
467	chr3R	20238463	20238536	mdg1	7416	6	11	73	'7-4	73.88	0.2	9.2	intron	Nlg4 +	chr3R_11_20235001	chr3R_20235001	0.64	RAL-40
468	chr3R	20263618	20263725	roo	8663	9062	45	107	'26-19	65.69	10.1	4.1	intron	cic +	chr3R_45_20260001	chr3R_20260001	0.58	RAL-40
469	chr3R	20317901	20318010	Tirant	8504	8107	20	109	'15-5	68.81	4.8	3.4	intron	CG42668 +	chr3R_20_20315001	chr3R_20315001	0.75	RAL-40
470	chr3R	20337723	20337845	roo	8663	409	22	122	'15-7	70.45	8.3	2.4	intergenic	not near genes	chr3R_22_20335001	chr3R_20335001	0.68	RAL-40
471	chr3R	20967532	20967653	flea	256	4758	33	121	'15-18	67.85	10.3	2.9	intron	Atpalpha +	chr3R_33_20965001	chr3R_20965001	0.45	RAL-40
472	chr3R	21713678	21713800	roo	410	8664	39	122	'15-24	67.22	5.5	6.0	intron	CG31176 -	chr3R_39_21710001	chr3R_21710001	0.38	RAL-40
473	chr3R	22325777	22325903	mdg3	5251	250	39	126	'26-13	67.01	7.8	4.4	intergenic	not near genes	chr3R_39_22325001	chr3R_22325001	0.67	RAL-40
474	chr3R	22627478	22627595	hobo	2	2710	16	117	'8-8	63.15	4.8	2.8	intron	loco -	chr3R_16_22625001	chr3R_22625001	0.50	RAL-40
475	chr3R	22836431	22836459	Doc	50	83	10	28	'4-6	65.95	8.9	1.0	intergenic	not near genes	chr3R_10_22835001	chr3R_22835001	0.40	RAL-40
476	chr3R	22904158	22904201	X-element	4665	4708	16	43	'9-7	63.13	11.5	1.3	intron	klg +	chr3R_16_22900001	chr3R_22900001	0.56	RAL-40
477	chr3R	22946449	22946557	Transpac	15	311	41	108	'16-25	63.19	11.2	3.4	intron	klg +	chr3R_41_22945001	chr3R_22945001	0.39	RAL-40
478	chr3R	23018019	23018102	blood	7015	7356	35	83	'27-8	66.65	10.9	2.9	intergenic	not near genes	chr3R_35_23015001	chr3R_23015001	0.77	RAL-40
479	chr3R	23038833	23038946	blood	2	7383	31	113	'16-15	62.35	8.1	3.4	intergenic	not near genes	chr3R_31_23035001	chr3R_23035001	0.52	RAL-40
480	chr3R	23045294	23045404	springer	13	7523	25	110	'13-12	64.44	5.1	4.1	exon	CG17121 -	chr3R_25_23045001	chr3R_23045001	0.52	RAL-40
481	chr3R	23240934	23240970	hobo	44	6	20	36	'17-3	63.15	5.8	2.9	intron	CG4467 -	chr3R_20_23240001	chr3R_23240001	0.85	RAL-40
482	chr3R	23438295	23438414	diver	5887	222	50	119	'27-23	67.21	9.1	5.0	intron	CG4374 -	chr3R_50_23435001	chr3R_23435001	0.54	RAL-40
483	chr3R	23599713	23599780	hobo	47	2935	12	67	'4-8	66.05	6.1	1.7	intergenic	not near genes	chr3R_12_23595001	chr3R_23595001	0.33	RAL-40
484	chr3R	23607431	23607538	297	6581	6963	24	107	'15-9	66.46	10.2	2.1	intron	CG31145 -	chr3R_24_23605001	chr3R_23605001	0.62	RAL-40
485	chr3R	24069568	24069710	297	6580	393	16	142	'4-12	60.77	4.7	2.8	intron	4EHP -	chr3R_16_24065001	chr3R_24065001	0.25	RAL-40
486	chr3R	24253054	24253160	hobo	2	2933	19	106	'11-8	65.59	7.7	2.2	3` UTR	jar -	chr3R_19_24250001	chr3R_24250001	0.58	RAL-40
487	chr3R	24448335	24448423	Quasimodo	7346	4	9	88	'3-6	71.59	6.2	1.2	intron	nAChRalpha1 -	chr3R_9_24445001	chr3R_24445001	0.33	RAL-40
488	chr3R	24475571	24475622	jockey	6	32	21	51	'8-13	65.75	12.8	1.5	intergenic	not near genes	chr3R_21_24475001	chr3R_24475001	0.38	RAL-40
489	chr3R	24489548	24489598	Doc	34	3	20	50	'12-8	63.25	4.4	3.7	intron	nAChRalpha2 +	chr3R_20_24485001	chr3R_24485001	0.60	RAL-40
490	chr3R	24565798	24565909	Tirant	8105	401	22	111	'7-15	66.22	8.1	2.4	intron	CG13624 -	chr3R_22_24565001	chr3R_24565001	0.32	RAL-40
491	chr3R	25293015	25293130	Burdock	6134	246	18	115	'6-12	66.27	6.5	2.4	intergenic	CG31098 -,CG31102 -	chr3R_18_25290001	chr3R_25290001	0.33	RAL-40
492	chr3R	25394169	25394280	297	7	390	15	111	'8-7	64.78	10.1	1.4	intron	Fur1 -	chr3R_15_25390001	chr3R_25390001	0.53	RAL-40
493	chr3R	25772908	25773019	roo	407	8671	39	111	'13-26	64.11	9.9	3.6	intergenic	CG17197 -,CG17198 -	chr3R_39_25770001	chr3R_25770001	0.33	RAL-40
494	chr3R	26129808	26129918	jockey	4990	4762	39	110	'27-12	65.46	12.6	2.9	3` UTR	CG31324 +	chr3R_39_26125001	chr3R_26125001	0.69	RAL-40
495	chr3R	26233371	26233464	hobo	2915	1	27	93	'10-17	61.95	9.0	2.7	3` UTR	CG12290 +	chr3R_27_26230001	chr3R_26230001	0.37	RAL-40
496	chr3R	26808558	26808660	mdg1	7441	7038	36	102	'25-11	66.62	9.0	3.6	intron	Tl +	chr3R_36_26805001	chr3R_26805001	0.69	RAL-40
497	chr3R	26858860	26858900	412	7098	10	20	40	'9-11	63.32	14.8	1.3	intron	Lerp -	chr3R_20_26855001	chr3R_26855001	0.45	RAL-40
498	chr3R	27692925	27693015	mdg3	5256	5483	22	90	'15-7	65.65	4.2	4.2	intergenic	CG12880 +	chr3R_22_27690001	chr3R_27690001	0.68	RAL-40
499	chr3R	27784916	27785036	mdg1	7039	421	22	120	'9-13	63.83	7.4	2.6	intron	CG34353 -	chr3R_22_27780001	chr3R_27780001	0.41	RAL-40
500	chr3R	28298806	28298925	Transpac	4920	5227	44	119	'22-22	66.72	9.9	4.0	intergenic	not near genes	chr3R_44_28295001	chr3R_28295001	0.50	RAL-40
501	chr3R	28406465	28406584	297	393	6583	23	119	'11-12	68.53	7.2	2.8	intergenic	not near genes	chr3R_23_28405001	chr3R_28405001	0.48	RAL-40
502	chr3R	28651742	28651853	roo	8670	9067	34	111	'25-9	68.77	9.6	3.2	intergenic	not near genes	chr3R_34_28650001	chr3R_28650001	0.74	RAL-40
503	chr3R	28676545	28676669	blood	378	7009	32	124	'9-23	67.96	12.8	2.3	intron	CG9990 +	chr3R_32_28675001	chr3R_28675001	0.28	RAL-40
504	chr3R	28724324	28724374	F-element	137	187	20	50	'7-13	68.80	12.0	1.5	intron	htt +	chr3R_20_28720001	chr3R_28720001	0.35	RAL-40
505	chr3R	28928443	28928493	jockey	56	4987	22	50	'7-15	54.50	7.8	2.5	intron	CG14521 -	chr3R_22_28925001	chr3R_28925001	0.32	RAL-40
506	chr3R	29085700	29085813	roo	403	8665	52	113	'26-26	66.58	11.3	4.2	intron	CG11873 +	chr3R_52_29085001	chr3R_29085001	0.50	RAL-40
507	chr3R	29418825	29418859	Gypsy6A_LTR	384	365	17	34	'7-10	66.10	1.3	7.4	intron	Ptp99A +	chr3R_17_29415001	chr3R_29415001	0.41	RAL-40
508	chr3R	29418887	29418930	gypsy6	10	7416	9	43	'5-4	62.46	6.3	1.2	intron	Ptp99A +	chr3R_9_29415001	chr3R_29415001	0.56	RAL-40
509	chr3R	29430847	29430950	hobo	5	2934	21	103	'13-8	67.33	8.3	2.3	intron	Ptp99A +	chr3R_21_29430001	chr3R_29430001	0.62	RAL-40
510	chr3R	29635969	29636010	Rt1a	23	10	9	41	'5-4	61.16	10.1	0.8	intron	Dop1R2 -	chr3R_9_29635001	chr3R_29635001	0.56	RAL-40
511	chr3R	29655647	29655790	hobo	2	2710	22	143	'12-10	57.55	6.5	2.9	intron	Dop1R2 -	chr3R_22_29655001	chr3R_29655001	0.55	RAL-40
512	chr3R	29764911	29764966	jockey	4666	4721	23	55	'8-15	64.09	10.2	2.1	intergenic	not near genes	chr3R_23_29760001	chr3R_29760001	0.35	RAL-40
513	chr3R	30049789	30049910	297	394	6582	31	121	'17-14	68.16	10.0	2.8	intron,intron	CG15528 -,CR44046 +	chr3R_31_30045001	chr3R_30045001	0.55	RAL-40
514	chr3R	30074939	30074984	jockey	4716	4670	15	45	'11-4	63.56	10.1	1.4	intron	sima +	chr3R_15_30070001	chr3R_30070001	0.73	RAL-40
515	chr3R	30238597	30238723	HMS-Beagle2	6882	7198	38	126	'11-27	65.18	6.8	4.9	intergenic	not near genes	chr3R_38_30235001	chr3R_30235001	0.29	RAL-40
516	chr3R	30283155	30283272	S-element	4	3	27	117	'12-15	68.08	6.5	3.6	intron	hdc +	chr3R_27_30280001	chr3R_30280001	0.44	RAL-40
517	chr3R	30296708	30296821	412	492	7	35	113	'20-15	67.57	8.0	3.9	intron	hdc +	chr3R_35_30295001	chr3R_30295001	0.57	RAL-40
518	chr3R	30345751	30345833	hobo	34	2937	14	82	'6-8	71.87	6.5	1.9	intron	hdc +	chr3R_14_30345001	chr3R_30345001	0.43	RAL-40
519	chr3R	30542216	30542259	jockey	5	14	12	43	'6-6	58.84	13.2	0.8	intron	tmod +	chr3R_12_30540001	chr3R_30540001	0.50	RAL-40
520	chr3R	30933163	30933258	blood	7009	359	21	95	'7-14	64.38	5.2	3.4	intergenic	not near genes	chr3R_21_30930001	chr3R_30930001	0.33	RAL-40
521	chr3R	31009048	31009084	I-element	5311	5347	10	36	'6-4	67.47	6.8	1.3	intron	5-HT7 -	chr3R_10_31005001	chr3R_31005001	0.60	RAL-40
522	chr3R	31028700	31028821	roo	2	411	53	121	'24-29	64.56	10.4	4.6	intergenic	not near genes	chr3R_53_31025001	chr3R_31025001	0.45	RAL-40
523	chr3R	31127617	31127692	Juan	4209	4085	21	75	'10-11	63.03	13.8	1.4	intergenic	CG15554 +,CG15556 -	chr3R_21_31125001	chr3R_31125001	0.48	RAL-40
524	chr3R	31168852	31168944	I-element	5339	4	37	92	'16-21	66.57	10.4	3.2	intron,5` UTR	Gycbeta100B +,stops -	chr3R_37_31165001	chr3R_31165001	0.43	RAL-40
525	chr4	289893	289929	F-element	12	28	9	36	'4-5	62.48	14.2	0.6	intron	Syt7 -	chr4_9_285001	chr4_285001	0.44	RAL-40
526	chr4	311185	311230	1360	2	3342	18	45	'11-7	65.35	10.3	1.6	3` UTR	Zip102B -	chr4_18_310001	chr4_310001	0.61	RAL-40
527	chr4	311561	311606	1360	42	6	21	45	'10-11	64.82	5.9	3.0	3` UTR	Zip102B -	chr4_21_310001	chr4_310001	0.48	RAL-40
528	chr4	730513	730623	pogo	12	2099	28	110	'15-13	69.64	11.3	2.3	intron	bt +	chr4_28_730001	chr4_730001	0.54	RAL-40
529	chr4	826981	827098	297	392	6583	35	117	'25-10	68.60	8.6	3.6	intron	Sox102F -	chr4_35_825001	chr4_825001	0.71	RAL-40
530	chr4	1114300	1114416	opus	6	498	30	116	'11-19	65.74	9.7	2.8	3` UTR	Cals -	chr4_30_1110001	chr4_1110001	0.37	RAL-40
531	chr4	1197435	1197547	opus	495	7	47	112	'26-21	67.69	6.8	6.0	intergenic	not near genes	chr4_47_1195001	chr4_1195001	0.55	RAL-40
532	chrX	129398	129480	S-element	1675	1	22	82	'3-19	68.28	6.7	2.9	exon	RhoGAP1A +	chrX_22_125001	chrX_125001	0.14	RAL-40
533	chrX	451528	451641	Transpac	5224	4	35	113	'13-22	65.33	7.7	4.0	intron	CG32816 -	chrX_35_450001	chrX_450001	0.37	RAL-40
534	chrX	543275	543386	hobo	2935	1	18	111	'4-14	64.85	7.9	2.0	intron	Appl +	chrX_18_540001	chrX_540001	0.22	RAL-40
535	chrX	560389	560507	roo	8667	409	36	118	'22-14	66.41	8.9	3.6	intron	Appl +	chrX_36_560001	chrX_560001	0.61	RAL-40
536	chrX	616390	616477	FB	1	1	24	87	'8-16	66.87	6.4	3.2	intron	CG13366 -	chrX_24_615001	chrX_615001	0.33	RAL-40
537	chrX	670897	671009	roo	408	8	27	112	'17-10	65.91	6.9	3.4	intergenic	not near genes	chrX_27_670001	chrX_670001	0.63	RAL-40
538	chrX	711735	711837	297	6600	6974	22	102	'6-16	65.92	4.7	3.9	intron	sdk +	chrX_22_710001	chrX_710001	0.27	RAL-40
539	chrX	725012	725133	S-element	1714	1	25	121	'7-18	67.77	10.4	2.2	intron	sdk +	chrX_25_725001	chrX_725001	0.28	RAL-40
540	chrX	868732	868825	jockey	4986	5	28	93	'15-13	58.21	7.9	3.1	intron	CG43867 -	chrX_28_865001	chrX_865001	0.54	RAL-40
541	chrX	872682	872722	mdg3	245	206	16	40	'8-8	63.75	12.1	1.2	intron	CG43867 -	chrX_16_870001	chrX_870001	0.50	RAL-40
542	chrX	1523632	1523675	jockey	15	60	11	43	'7-4	61.27	11.5	0.9	intergenic	not near genes	chrX_11_1520001	chrX_1520001	0.64	RAL-40
543	chrX	1833416	1833446	I-element	5340	5308	6	30	'3-3	65.03	11.8	0.5	intron	CG42666 +	chrX_6_1830001	chrX_1830001	0.50	RAL-40
544	chrX	2397195	2397301	Tirant	8503	14	20	106	'15-5	68.53	4.3	3.8	intergenic	not near genes	chrX_20_2395001	chrX_2395001	0.75	RAL-40
545	chrX	2557917	2557988	mdg1	7439	29	11	71	'10-1	64.68	6.1	1.5	intron	Pdfr +	chrX_11_2555001	chrX_2555001	0.91	RAL-40
546	chrX	2564980	2565051	jockey	22	4981	16	71	'6-10	60.41	7.1	2.0	intron	Pdfr +	chrX_16_2560001	chrX_2560001	0.38	RAL-40
547	chrX	2686524	2686598	I-element	5171	5347	23	74	'10-13	52.79	8.2	2.5	intron	per +	chrX_23_2685001	chrX_2685001	0.43	RAL-40
548	chrX	2745133	2745242	FB	6	1	32	109	'17-15	66.45	10.9	2.7	intron	kirre +	chrX_32_2745001	chrX_2745001	0.53	RAL-40
549	chrX	2814927	2815000	I-element	1	5322	23	73	'14-9	66.63	7.5	2.7	intron	kirre +	chrX_23_2810001	chrX_2810001	0.61	RAL-40
550	chrX	2857052	2857184	mdg1	421	1	20	132	'18-2	65.97	6.3	2.7	intron	kirre +	chrX_20_2855001	chrX_2855001	0.90	RAL-40
551	chrX	2899213	2899333	roo	8662	9069	31	120	'15-16	66.88	5.6	4.7	intron	kirre +	chrX_31_2895001	chrX_2895001	0.48	RAL-40
552	chrX	3319027	3319112	hobo	2938	22	15	85	'5-10	63.18	3.2	3.6	intron,intron	dnc +,CR44886 -	chrX_15_3315001	chrX_3315001	0.33	RAL-40
553	chrX	3506369	3506485	mdg1	4	420	31	116	'8-23	66.32	7.0	3.9	intron	CR44999 +	chrX_31_3505001	chrX_3505001	0.26	RAL-40
554	chrX	3524663	3524780	roo	408	8667	38	117	'22-16	66.43	5.4	5.9	intron	CG32791 -	chrX_38_3520001	chrX_3520001	0.58	RAL-40
555	chrX	3658529	3658626	roo	8662	9046	38	97	'25-13	65.23	8.6	4.0	intron	AstA-R1 +	chrX_38_3655001	chrX_3655001	0.66	RAL-40
556	chrX	3743742	3743863	Tirant	404	8110	15	121	'12-3	66.71	7.8	1.7	intron	tlk +	chrX_15_3740001	chrX_3740001	0.80	RAL-40
557	chrX	4295557	4295666	I-element	5350	4	46	109	'21-25	62.59	7.2	5.6	intergenic	not near genes	chrX_46_4295001	chrX_4295001	0.46	RAL-40
558	chrX	4528971	4529086	Transpac	3	311	29	115	'16-13	64.82	6.7	3.8	intron	CR32773 -	chrX_29_4525001	chrX_4525001	0.55	RAL-40
559	chrX	4743178	4743287	roo	8664	397	30	109	'17-13	67.85	4.3	5.7	intergenic	not near genes	chrX_30_4740001	chrX_4740001	0.57	RAL-40
560	chrX	4894223	4894344	roo	1	410	33	121	'18-15	67.93	7.8	3.7	intron	CG42594 +	chrX_33_4890001	chrX_4890001	0.55	RAL-40
561	chrX	4936428	4936537	P-element	2883	5	39	109	'12-27	49.15	7.2	4.8	intron	CG44774 -	chrX_39_4935001	chrX_4935001	0.31	RAL-40
562	chrX	4970323	4970426	I-element	5345	5172	34	103	'10-24	65.54	7.4	4.0	intron	CR44833 -	chrX_34_4970001	chrX_4970001	0.29	RAL-40
563	chrX	5018695	5018799	Juan	4204	4022	36	104	'20-16	63.45	7.5	4.2	intron	CR44833 -	chrX_36_5015001	chrX_5015001	0.56	RAL-40
564	chrX	5048069	5048178	P-element	2885	6	32	109	'13-19	49.37	7.1	4.0	intron	CR44833 -	chrX_32_5045001	chrX_5045001	0.41	RAL-40
565	chrX	5053159	5053206	S-element	1	2	7	47	'5-2	65.21	8.7	0.7	intron,intron	CR44833 -,ovo +	chrX_7_5050001	chrX_5050001	0.71	RAL-40
566	chrX	5451409	5451434	jockey	32	7	9	25	'3-6	67.92	9.5	0.9	intron	SPR +	chrX_9_5450001	chrX_5450001	0.33	RAL-40
567	chrX	5848266	5848385	opus	111	498	30	119	'16-14	70.69	7.9	3.4	intergenic	not near genes	chrX_30_5845001	chrX_5845001	0.53	RAL-40
568	chrX	5856085	5856200	pogo	2098	2	27	115	'13-14	67.23	3.7	5.7	intergenic	not near genes	chrX_27_5855001	chrX_5855001	0.48	RAL-40
569	chrX	5856948	5857031	HMS-Beagle	240	6829	22	83	'18-4	64.55	6.5	2.9	intergenic	not near genes	chrX_22_5855001	chrX_5855001	0.82	RAL-40
570	chrX	5884405	5884497	Juan	4036	4210	29	92	'11-18	62.98	3.5	6.4	intron	CR45668 -	chrX_29_5880001	chrX_5880001	0.38	RAL-40
571	chrX	6346114	6346233	roo	8662	405	41	119	'22-19	65.42	8.6	4.3	intergenic	not near genes	chrX_41_6345001	chrX_6345001	0.54	RAL-40
572	chrX	6484702	6484781	hobo	2920	6	16	79	'7-9	66.16	3.7	3.4	intron	CG42340 -	chrX_16_6480001	chrX_6480001	0.44	RAL-40
573	chrX	7042821	7042915	Stalker2	7257	7646	24	94	'15-9	65.89	8.1	2.6	intron	CG12541 -	chrX_24_7040001	chrX_7040001	0.62	RAL-40
574	chrX	7048634	7048684	hobo	45	1	13	50	'9-4	61.20	8.3	1.4	intron	CG12541 -	chrX_13_7045001	chrX_7045001	0.69	RAL-40
575	chrX	7060092	7060215	roo	413	8666	28	123	'15-13	66.22	9.0	2.8	intron	CG12541 -	chrX_28_7060001	chrX_7060001	0.54	RAL-40
576	chrX	7195028	7195137	P-element	2883	2883	39	109	'20-19	46.92	6.3	5.3	intron,intron	CG9650 +,CR44357 -	chrX_39_7195001	chrX_7195001	0.51	RAL-40
577	chrX	7467379	7467454	hobo	6	2929	8	75	'4-4	65.04	6.0	1.1	intergenic	not near genes	chrX_8_7465001	chrX_7465001	0.50	RAL-40
578	chrX	7652999	7653060	FB	16	1	14	61	'8-6	69.41	10.2	1.2	intron	ct +	chrX_14_7650001	chrX_7650001	0.57	RAL-40
579	chrX	7749157	7749278	roo	8664	409	27	121	'21-6	72.22	6.7	3.5	intergenic	not near genes	chrX_27_7745001	chrX_7745001	0.78	RAL-40
580	chrX	7758838	7758964	hobo	1	2928	15	126	'9-6	55.95	5.4	2.3	intergenic	not near genes	chrX_15_7755001	chrX_7755001	0.60	RAL-40
581	chrX	7784001	7784097	hopper	1410	1394	17	96	'10-7	63.37	7.2	2.1	intergenic	not near genes	chrX_17_7780001	chrX_7780001	0.59	RAL-40
582	chrX	7891864	7891978	P-element	2884	2886	20	114	'12-8	60.56	6.8	2.6	intergenic	Nek2 -	chrX_20_7890001	chrX_7890001	0.60	RAL-40
583	chrX	7992720	7992768	hobo	26	2925	5	48	'4-1	53.95	9.1	0.5	intergenic	not near genes	chrX_5_7990001	chrX_7990001	0.80	RAL-40
584	chrX	8026195	8026308	1360	3388	3384	33	113	'16-17	65.66	8.0	3.7	3` UTR	Tbh +	chrX_33_8025001	chrX_8025001	0.48	RAL-40
585	chrX	8728659	8728773	HMS-Beagle	247	6798	37	114	'20-17	65.61	7.9	4.2	intergenic	not near genes	chrX_37_8725001	chrX_8725001	0.54	RAL-40
586	chrX	8992349	8992466	Quasimodo	2	7364	18	117	'9-9	68.20	8.1	2.0	intron,intron	rdgA +,CR43836 -	chrX_18_8990001	chrX_8990001	0.50	RAL-40
587	chrX	9134976	9135081	P-element	2875	2886	35	105	'17-18	44.86	7.6	4.1	5` UTR	fend -	chrX_35_9130001	chrX_9130001	0.49	RAL-40
588	chrX	9514113	9514224	McClintock	5952	6427	23	111	'14-9	68.99	5.0	3.8	intron	CG32700 -	chrX_23_9510001	chrX_9510001	0.61	RAL-40
589	chrX	9874194	9874224	jockey	4742	4712	13	30	'4-9	58.51	4.3	2.5	intergenic	CG32695 -,CG15247 -	chrX_13_9870001	chrX_9870001	0.31	RAL-40
590	chrX	9933157	9933252	hobo	2933	2	15	95	'3-12	63.53	4.2	2.9	intergenic	not near genes	chrX_15_9930001	chrX_9930001	0.20	RAL-40
591	chrX	10119559	10119644	FB	14	11	8	85	'4-4	54.77	3.3	1.9	intron,intron	RhoU +,CR44894 -	chrX_8_10115001	chrX_10115001	0.50	RAL-40
592	chrX	10199041	10199154	roo	408	8670	37	113	'24-13	64.40	9.1	3.7	intron	CR44894 -	chrX_37_10195001	chrX_10195001	0.65	RAL-40
593	chrX	10285001	10285100	17.6	9	7412	16	99	'12-4	65.66	6.9	2.0	intron	alpha-Man-I -	chrX_16_10285001	chrX_10285001	0.75	RAL-40
594	chrX	10323065	10323090	I-element	5308	5333	12	25	'6-6	62.62	6.7	1.6	intron	alpha-Man-I -	chrX_12_10320001	chrX_10320001	0.50	RAL-40
595	chrX	10399554	10399607	Doc	4270	4297	17	53	'11-6	67.67	7.2	2.1	intron	flw +	chrX_17_10395001	chrX_10395001	0.65	RAL-40
596	chrX	10409575	10409605	hobo	2907	38	4	30	'1-3	68.12	9.7	0.4	3` UTR	flw +	chrX_4_10405001	chrX_10405001	0.25	RAL-40
597	chrX	10600570	10600680	Tc3	317	316	5	110	'3-2	67.77	8.4	0.5	intron	CG1628 -	chrX_5_10600001	chrX_10600001	0.60	RAL-40
598	chrX	10651580	10651677	I-element	1	5347	23	97	'6-17	65.72	3.3	5.3	intron	X11Lbeta +	chrX_23_10650001	chrX_10650001	0.26	RAL-40
599	chrX	11008337	11008432	flea	249	12	15	95	'5-10	62.28	6.3	2.1	intron	CG42339 -	chrX_15_11005001	chrX_11005001	0.33	RAL-40
600	chrX	11032314	11032406	roo	8672	9051	30	92	'21-9	68.42	7.4	3.6	intron	CG42339 -	chrX_30_11030001	chrX_11030001	0.70	RAL-40
601	chrX	11321647	11321712	roo	7	405	17	65	'9-8	68.94	6.0	2.4	3` UTR	sisA -	chrX_17_11320001	chrX_11320001	0.53	RAL-40
602	chrX	11821369	11821485	pogo	2099	6	25	116	'15-10	69.21	9.2	2.5	intron	rudhira +	chrX_25_11820001	chrX_11820001	0.60	RAL-40
603	chrX	12073311	12073378	hopper	1396	19	7	67	'4-3	58.34	7.2	0.9	intron,intron	CR43960 +,Ten-a +	chrX_7_12070001	chrX_12070001	0.57	RAL-40
604	chrX	12224778	12224877	FB	17	1	12	99	'5-7	63.95	5.3	1.9	intron	Ten-a +	chrX_12_12220001	chrX_12220001	0.42	RAL-40
605	chrX	12353543	12353632	hobo	2919	4	6	89	'2-4	63.70	1.5	2.4	intergenic	not near genes	chrX_6_12350001	chrX_12350001	0.33	RAL-40
606	chrX	12358892	12359005	mdg3	5252	237	12	113	'7-5	64.67	4.3	2.3	intergenic	not near genes	chrX_12_12355001	chrX_12355001	0.58	RAL-40
607	chrX	12727562	12727677	P-element	1	2	23	115	'14-9	48.42	5.1	3.8	intron,intron	Smr -,CR43963 -	chrX_23_12725001	chrX_12725001	0.61	RAL-40
608	chrX	12912751	12912874	roo	8664	411	29	123	'8-21	68.62	3.4	6.6	5` UTR	CR45625 +	chrX_29_12910001	chrX_12910001	0.28	RAL-40
609	chrX	13025754	13025873	roo	8667	410	39	119	'20-19	68.79	7.6	4.5	intron	rad +	chrX_39_13025001	chrX_13025001	0.51	RAL-40
610	chrX	13096373	13096474	412	12	493	12	101	'5-7	62.67	10.0	1.1	3` UTR	CG43313 -	chrX_12_13095001	chrX_13095001	0.42	RAL-40
611	chrX	13704535	13704652	roo	406	1	22	117	'11-11	68.95	7.5	2.6	intron,intron	CG9940 -,NnaD +	chrX_22_13700001	chrX_13700001	0.50	RAL-40
612	chrX	14184000	14184111	rover	347	6956	32	111	'14-18	66.74	5.4	5.0	intergenic	not near genes	chrX_32_14180001	chrX_14180001	0.44	RAL-40
613	chrX	14365799	14365912	hopper	4	2	13	113	'5-8	65.87	4.2	2.5	intron	dpr8 +	chrX_13_14365001	chrX_14365001	0.38	RAL-40
614	chrX	14477051	14477172	roo	8666	411	9	121	'8-1	65.04	8.0	1.0	intron	CG9411 -	chrX_9_14475001	chrX_14475001	0.89	RAL-40
615	chrX	14734466	14734573	flea	4756	244	10	107	'6-4	64.83	7.5	1.2	intron	NetB -	chrX_10_14730001	chrX_14730001	0.60	RAL-40
616	chrX	14961093	14961178	jockey	4973	4762	23	85	'10-13	65.34	7.0	2.9	intron	eag +	chrX_23_14960001	chrX_14960001	0.43	RAL-40
617	chrX	15403988	15404100	roo	8	408	35	112	'16-19	68.94	8.0	3.9	intron	Cngl -	chrX_35_15400001	chrX_15400001	0.46	RAL-40
618	chrX	15561032	15561073	hobo	39	9	11	41	'8-3	62.70	6.2	1.5	intergenic	not near genes	chrX_11_15560001	chrX_15560001	0.73	RAL-40
619	chrX	15841137	15841163	INE-1	144	170	11	26	'7-4	61.80	14.0	0.7	3` UTR	CG8565 +	chrX_11_15840001	chrX_15840001	0.64	RAL-40
620	chrX	16241291	16241334	Juan	4167	4210	20	43	'11-9	60.53	10.4	1.8	intergenic	not near genes	chrX_20_16240001	chrX_16240001	0.55	RAL-40
621	chrX	16244820	16244849	Ivk	5346	5375	9	29	'7-2	68.07	9.5	0.9	intergenic	not near genes	chrX_9_16240001	chrX_16240001	0.78	RAL-40
622	chrX	16373723	16373840	Burdock	6142	255	33	117	'16-17	64.67	8.7	3.4	intron	Fur2 +	chrX_33_16370001	chrX_16370001	0.48	RAL-40
623	chrX	16515639	16515665	hopper	26	7	7	26	'4-3	61.76	3.9	1.4	intron	para -	chrX_7_16515001	chrX_16515001	0.57	RAL-40
624	chrX	16726998	16727024	jockey2	3350	3376	15	26	'6-9	73.12	11.6	1.2	intergenic	CG32572 +,CG9634 -	chrX_15_16725001	chrX_16725001	0.40	RAL-40
625	chrX	17017575	17017694	TART-A	13110	13111	4	119	'1-3	72.61	5.0	0.7	intron	CG45002 -	chrX_4_17015001	chrX_17015001	0.25	RAL-40
626	chrX	17184131	17184166	mdg3	5496	5291	7	35	'6-1	66.51	5.6	1.1	intron	baz +	chrX_7_17180001	chrX_17180001	0.86	RAL-40
627	chrX	17268944	17269059	roo	404	8665	40	115	'12-28	64.47	9.1	4.0	intron	f +	chrX_40_17265001	chrX_17265001	0.30	RAL-40
628	chrX	17404940	17404982	hobo	4	36	13	42	'5-8	66.36	7.0	1.6	intergenic	not near genes	chrX_13_17400001	chrX_17400001	0.38	RAL-40
629	chrX	18526771	18526887	pogo	6	2099	28	116	'7-21	67.00	6.7	3.6	intron	Bx +	chrX_28_18525001	chrX_18525001	0.25	RAL-40
630	chrX	18722411	18722531	roo	8664	408	42	120	'24-18	66.56	8.4	4.5	intron	CCKLR-17D1 -	chrX_42_18720001	chrX_18720001	0.57	RAL-40
631	chrX	18866695	18866804	1360	3386	3382	38	109	'27-11	65.87	7.2	4.6	intron	CG34401 +	chrX_38_18865001	chrX_18865001	0.71	RAL-40
632	chrX	18926116	18926164	P-element	2870	41	12	48	'4-8	34.28	5.1	2.0	intergenic	not near genes	chrX_12_18925001	chrX_18925001	0.33	RAL-40
633	chrX	19129721	19129836	roo	406	3	28	115	'15-13	65.14	4.8	4.8	intergenic	not near genes	chrX_28_19125001	chrX_19125001	0.54	RAL-40
634	chrX	19607816	19607915	S-element	1707	1700	12	99	'2-10	65.98	6.9	1.5	intron	CG14207 +	chrX_12_19605001	chrX_19605001	0.17	RAL-40
635	chrX	19718348	19718452	hobo	11	2936	16	104	'13-3	64.14	6.7	2.1	intergenic	not near genes	chrX_16_19715001	chrX_19715001	0.81	RAL-40
636	chrX	19745682	19745717	Max-element	298	285	5	35	'3-2	65.93	29.5	0.2	3` UTR,3` UTR	CG33932 +,Rpp20 +	chrX_5_19745001	chrX_19745001	0.60	RAL-40
637	chrX	19818349	19818390	jockey	4527	4568	12	41	'3-9	61.03	5.0	2.0	intergenic	not near genes	chrX_12_19815001	chrX_19815001	0.25	RAL-40
638	chrX	20019918	20019963	jockey	22	8	12	45	'4-8	60.56	5.9	1.7	intron	Dop2R -	chrX_12_20015001	chrX_20015001	0.33	RAL-40
639	chrX	20067153	20067253	hopper	1411	16	4	100	'3-1	67.36	3.2	1.0	intergenic	not near genes	chrX_4_20065001	chrX_20065001	0.75	RAL-40
640	chrX	20082078	20082176	hopper	22	8	25	98	'11-14	64.38	5.2	4.0	intergenic	not near genes	chrX_25_20080001	chrX_20080001	0.44	RAL-40
641	chrX	20099912	20099940	S-element	8	1676	13	28	'8-5	62.06	9.7	1.2	intergenic	not near genes	chrX_13_20095001	chrX_20095001	0.62	RAL-40
642	chrX	20265720	20265753	412	492	459	12	33	'7-5	65.21	13.6	0.8	intergenic	not near genes	chrX_12_20265001	chrX_20265001	0.58	RAL-40
643	chrX	20316216	20316329	roo	402	8665	27	113	'18-9	69.54	8.9	2.7	intron	CG1504 -	chrX_27_20315001	chrX_20315001	0.67	RAL-40
644	chrX	20538637	20538728	roo	390	8675	15	91	'7-8	66.11	11.0	1.2	intron	RunxB +	chrX_15_20535001	chrX_20535001	0.47	RAL-40
645	chrX	20987196	20987313	Transpac	4921	307	43	117	'26-17	63.17	6.7	5.6	intergenic	not near genes	chrX_43_20985001	chrX_20985001	0.60	RAL-40
646	chrX	20996878	20996991	roo	8670	9070	37	113	'20-17	67.44	5.9	5.4	intergenic	not near genes	chrX_37_20995001	chrX_20995001	0.54	RAL-40
647	chrX	21087571	21087679	mdg3	5262	244	16	108	'12-4	62.70	2.3	4.8	intergenic	not near genes	chrX_16_21085001	chrX_21085001	0.75	RAL-40
648	chrX	21095684	21095784	Tabor	7318	14	15	100	'7-8	59.79	8.3	1.6	intron,intron,3` UTR	CG11566 +,stg1 +,CG15446 -	chrX_15_21095001	chrX_21095001	0.47	RAL-40
649	chrX	21120756	21120870	Burdock	248	6137	37	114	'15-22	67.35	5.4	5.8	intergenic	CG15445 +	chrX_37_21120001	chrX_21120001	0.41	RAL-40
650	chrX	21204982	21205166	1360	3373	116	22	184	'7-15	59.28	3.0	5.5	intergenic	CG32521 -	chrX_22_21200001	chrX_21200001	0.32	RAL-40
651	chrX	21292568	21292684	Quasimodo	4	7365	10	116	'8-2	73.24	5.9	1.4	3` UTR	CG1718 -	chrX_10_21290001	chrX_21290001	0.80	RAL-40
652	chrX	21322754	21322846	Juan	4201	4025	26	92	'11-15	63.31	5.9	3.8	intron	Dd -	chrX_26_21320001	chrX_21320001	0.42	RAL-40
653	chrX	21637869	21637914	412	48	3	11	45	'5-6	67.41	9.2	1.1	intergenic	not near genes	chrX_11_21635001	chrX_21635001	0.45	RAL-40
654	chrX	21638087	21638121	gtwin	38	4	12	34	'6-6	62.72	18.7	0.6	intergenic	not near genes	chrX_12_21635001	chrX_21635001	0.50	RAL-40
655	chrX	21667898	21667930	gypsy2	6525	6509	12	32	'5-7	65.46	13.1	0.9	intergenic	not near genes	chrX_12_21665001	chrX_21665001	0.42	RAL-40
656	chrX	21772472	21772499	springer	7149	7183	4	27	'2-2	65.62	5.3	0.6	intergenic	not near genes	chrX_4_21770001	chrX_21770001	0.50	RAL-40
657	chrX	22218796	22218846	1731	4311	49	18	50	'8-10	64.97	3.1	4.4	intergenic	not near genes	chrX_18_22215001	chrX_22215001	0.44	RAL-40
658	chrX	22635733	22635841	Juan	4209	4	31	108	'13-18	65.58	7.5	3.6	intergenic	not near genes	chrX_31_22635001	chrX_22635001	0.42	RAL-40
659	chrX	22676032	22676147	pogo	2098	6	33	115	'18-15	68.41	7.7	3.8	intron	CR44997 +	chrX_33_22675001	chrX_22675001	0.55	RAL-40
660	chrX	22678356	22678471	Tirant	8109	392	19	115	'4-15	69.12	5.5	2.9	intron	CR44997 +	chrX_19_22675001	chrX_22675001	0.21	RAL-40
661	chrX	22754083	22754129	hopper	24	1399	4	46	'1-3	49.11	20.7	0.2	intron	CR44997 +	chrX_4_22750001	chrX_22750001	0.25	RAL-40
662	chrX	22799775	22799884	Transpac	6	304	25	109	'6-19	65.92	5.2	4.0	intergenic	not near genes	chrX_25_22795001	chrX_22795001	0.24	RAL-40
663	chrX	22922352	22922421	297	6588	348	14	69	'10-4	70.73	8.5	1.5	intergenic	not near genes	chrX_14_22920001	chrX_22920001	0.71	RAL-40
664	chrX	22967267	22967388	roo	411	8666	39	121	'18-21	67.23	6.3	5.3	intergenic	not near genes	chrX_39_22965001	chrX_22965001	0.46	RAL-40
665	chrX	23108296	23108339	BS3	1446	1403	17	43	'7-10	59.44	27.1	0.6	3` UTR	ATbp +	chrX_17_23105001	chrX_23105001	0.41	RAL-40
666	chrY	424978	425014	McClintock	469	6386	16	36	'12-4	62.95	1.6	6.2	intergenic	not near genes	chrY_16_420001	chrY_420001	0.75	RAL-40
667	chrY	3648876	3648906	Stalker2	212	222	16	30	'6-10	60.51	5.4	2.5	intergenic	not near genes	chrY_16_3645001	chrY_3645001	0.38	RAL-40