SV# Chr Chr_coord_5p Chr_coord_3p TE TE_coord_start TE_coord_end Reads_collapsed Chr_Coord_Dist Symmetry avg_blat_score Norm_RefGen_Reads Coverage_Ratio classification comments insert_code loci_code Sym_score libname 1 chr2L 493993 494075 roo 8676 9052 15 82 '10-5 63.19 1.3 6.5 intron ush + chr2L_15_490001 chr2L_490001 0.67 RAL-409_95b 2 chr2L 769983 770072 roo 408 8673 12 89 '2-10 67.17 3.9 2.4 intergenic not near genes chr2L_12_765001 chr2L_765001 0.17 RAL-409_95b 3 chr2L 1376617 1376644 diver 2 15 8 27 '2-6 60.87 4.2 1.5 intergenic not near genes chr2L_8_1375001 chr2L_1375001 0.25 RAL-409_95b 4 chr2L 1481534 1481636 412 9 484 15 102 '5-10 60.10 3.5 3.3 intergenic not near genes chr2L_15_1480001 chr2L_1480001 0.33 RAL-409_95b 5 chr2L 1557080 1557175 Bari1 6 1698 9 95 '4-5 65.60 4.0 1.8 intron haf + chr2L_9_1555001 chr2L_1555001 0.44 RAL-409_95b 6 chr2L 2520506 2520590 412 7539 22 22 84 '15-7 63.69 3.6 4.8 intergenic not near genes chr2L_22_2520001 chr2L_2520001 0.68 RAL-409_95b 7 chr2L 3267560 3267589 copia 4895 11 6 29 '4-2 59.55 3.3 1.4 intergenic not near genes chr2L_6_3265001 chr2L_3265001 0.67 RAL-409_95b 8 chr2L 3862649 3862748 opus 497 11 11 99 '7-4 66.83 2.2 3.4 intergenic CG3964 + chr2L_11_3860001 chr2L_3860001 0.64 RAL-409_95b 9 chr2L 3924634 3924714 roo 9050 8665 5 80 '2-3 64.54 3.0 1.2 intron fred - chr2L_5_3920001 chr2L_3920001 0.40 RAL-409_95b 10 chr2L 4262844 4262953 roo 408 8670 13 109 '2-11 61.08 3.2 3.1 intergenic not near genes chr2L_13_4260001 chr2L_4260001 0.15 RAL-409_95b 11 chr2L 4514566 4514662 roo 8679 401 11 96 '4-7 62.59 4.3 2.1 intron dp - chr2L_11_4510001 chr2L_4510001 0.36 RAL-409_95b 12 chr2L 4596811 4596896 opus 111 499 13 85 '7-6 65.99 3.5 2.9 intron dp - chr2L_13_4595001 chr2L_4595001 0.54 RAL-409_95b 13 chr2L 4725116 4725156 Doc 7 51 9 40 '3-6 63.05 6.6 1.2 intergenic not near genes chr2L_9_4725001 chr2L_4725001 0.33 RAL-409_95b 14 chr2L 5121253 5121352 297 6584 394 13 99 '9-4 67.46 3.0 3.2 intron Msp300 + chr2L_13_5120001 chr2L_5120001 0.69 RAL-409_95b 15 chr2L 5574277 5574370 blood 7372 7012 7 93 '5-2 64.69 2.6 1.9 intergenic not near genes chr2L_7_5570001 chr2L_5570001 0.71 RAL-409_95b 16 chr2L 5698634 5698666 roo 404 9055 6 32 '3-3 63.93 3.1 1.5 intergenic not near genes chr2L_6_5695001 chr2L_5695001 0.50 RAL-409_95b 17 chr2L 5805294 5805379 pogo 8 2098 11 85 '2-9 62.59 1.2 5.0 intergenic CG11034 + chr2L_11_5805001 chr2L_5805001 0.18 RAL-409_95b 18 chr2L 5810151 5810194 jockey 13 34 11 43 '7-4 63.18 6.3 1.5 5` UTR CR44575 + chr2L_11_5810001 chr2L_5810001 0.64 RAL-409_95b 19 chr2L 5940826 5940903 412 5 478 11 77 '6-5 62.72 1.9 3.8 intergenic not near genes chr2L_11_5940001 chr2L_5940001 0.55 RAL-409_95b 20 chr2L 6870992 6871104 Transpac 309 4924 12 112 '6-6 64.25 5.5 1.8 intergenic CR44915 - chr2L_12_6870001 chr2L_6870001 0.50 RAL-409_95b 21 chr2L 7761206 7761276 Burdock 6386 6148 9 70 '5-4 61.46 3.3 2.1 intron CG7196 + chr2L_9_7760001 chr2L_7760001 0.56 RAL-409_95b 22 chr2L 8832936 8833024 roo 408 15 12 88 '10-2 64.76 3.1 2.9 intergenic not near genes chr2L_12_8830001 chr2L_8830001 0.83 RAL-409_95b 23 chr2L 8864151 8864232 Tirant 8117 395 5 81 '1-4 56.74 3.7 1.1 3` UTR,exon CR45260 -,CG32987 + chr2L_5_8860001 chr2L_8860001 0.20 RAL-409_95b 24 chr2L 9143503 9143536 diver 289 258 7 33 '3-4 64.70 5.1 1.1 intron CG32982 + chr2L_7_9140001 chr2L_9140001 0.43 RAL-409_95b 25 chr2L 9658516 9658561 297 6615 4 9 45 '2-7 64.85 7.5 1.1 intergenic not near genes chr2L_9_9655001 chr2L_9655001 0.22 RAL-409_95b 26 chr2L 10587906 10587973 copia 4870 238 18 67 '15-3 68.73 7.0 2.2 intron Trim9 + chr2L_18_10585001 chr2L_10585001 0.83 RAL-409_95b 27 chr2L 11045680 11045759 1360 3388 3379 12 79 '7-5 64.09 4.5 2.2 intron Samuel - chr2L_12_11045001 chr2L_11045001 0.58 RAL-409_95b 28 chr2L 11528328 11528362 pogo 8 18 7 34 '3-4 66.75 6.7 0.9 intergenic CG31705 - chr2L_7_11525001 chr2L_11525001 0.43 RAL-409_95b 29 chr2L 11569014 11569108 opus 7022 7497 19 94 '7-12 65.74 1.5 7.6 intergenic not near genes chr2L_19_11565001 chr2L_11565001 0.37 RAL-409_95b 30 chr2L 11700871 11700952 hobo 13 2915 7 81 '5-2 64.17 2.9 1.8 intergenic not near genes chr2L_7_11700001 chr2L_11700001 0.71 RAL-409_95b 31 chr2L 12184494 12184559 FB 17 11 6 65 '5-1 61.46 2.2 1.9 intron aret + chr2L_6_12180001 chr2L_12180001 0.83 RAL-409_95b 32 chr2L 12577717 12577816 copia 257 4871 14 99 '5-9 64.88 3.0 3.5 intergenic not near genes chr2L_14_12575001 chr2L_12575001 0.36 RAL-409_95b 33 chr2L 12870737 12870818 Tabor 2 489 18 81 '7-11 64.06 3.7 3.8 intergenic not near genes chr2L_18_12870001 chr2L_12870001 0.39 RAL-409_95b 34 chr2L 12898128 12898175 hobo 7 12 8 47 '2-6 60.70 2.7 2.2 intergenic not near genes chr2L_8_12895001 chr2L_12895001 0.25 RAL-409_95b 35 chr2L 13335454 13335494 jockey 4986 4971 7 40 '1-6 56.68 8.4 0.7 intergenic not near genes chr2L_7_13335001 chr2L_13335001 0.14 RAL-409_95b 36 chr2L 13695799 13695839 jockey 34 15 10 40 '6-4 65.40 2.4 2.9 intron CG31814 - chr2L_10_13695001 chr2L_13695001 0.60 RAL-409_95b 37 chr2L 13846403 13846512 roo 6 409 12 109 '5-7 66.33 4.8 2.1 intron CenG1A + chr2L_12_13845001 chr2L_13845001 0.42 RAL-409_95b 38 chr2L 13929172 13929202 copia 4869 4892 7 30 '4-3 63.74 4.7 1.2 intron Ance-3 + chr2L_7_13925001 chr2L_13925001 0.57 RAL-409_95b 39 chr2L 13932407 13932485 297 6592 6947 4 78 '1-3 64.41 1.7 1.5 intron Ance-3 + chr2L_4_13930001 chr2L_13930001 0.25 RAL-409_95b 40 chr2L 14752982 14753277 1360 3385 3379 21 295 '10-11 68.61 3.2 5.0 intergenic not near genes chr2L_21_14750001 chr2L_14750001 0.48 RAL-409_95b 41 chr2L 14755230 14755288 I-element 31 5334 15 58 '9-6 59.58 7.0 1.9 intergenic not near genes chr2L_15_14755001 chr2L_14755001 0.60 RAL-409_95b 42 chr2L 14843221 14843333 roo 2 402 12 112 '4-8 66.79 3.4 2.7 intergenic CG42682 + chr2L_12_14840001 chr2L_14840001 0.33 RAL-409_95b 43 chr2L 14863804 14863872 297 381 29 4 68 '3-1 69.36 3.5 0.9 intergenic not near genes chr2L_4_14860001 chr2L_14860001 0.75 RAL-409_95b 44 chr2L 15082422 15082478 412 5 7531 5 56 '2-3 63.26 2.9 1.3 intron CG15270 + chr2L_5_15080001 chr2L_15080001 0.40 RAL-409_95b 45 chr2L 15975889 15975914 297 380 380 4 25 '2-2 66.69 4.4 0.7 intergenic not near genes chr2L_4_15975001 chr2L_15975001 0.50 RAL-409_95b 46 chr2L 16230690 16230760 mdg1 7458 31 9 70 '5-4 64.47 4.3 1.7 intergenic not near genes chr2L_9_16230001 chr2L_16230001 0.56 RAL-409_95b 47 chr2L 17105453 17105488 412 10 37 9 35 '3-6 62.29 2.9 2.3 5` UTR CR45448 + chr2L_9_17105001 chr2L_17105001 0.33 RAL-409_95b 48 chr2L 17574367 17574439 hopper 1414 1412 6 72 '4-2 58.66 4.4 1.1 intergenic mir-287 + chr2L_6_17570001 chr2L_17570001 0.67 RAL-409_95b 49 chr2L 18074797 18074844 Doc 27 4 9 47 '1-8 65.16 6.5 1.2 intergenic not near genes chr2L_9_18070001 chr2L_18070001 0.11 RAL-409_95b 50 chr2L 18181044 18181101 hobo 19 2903 8 57 '7-1 63.34 5.7 1.2 intron,3` UTR CG42750 -,CG7180 - chr2L_8_18180001 chr2L_18180001 0.88 RAL-409_95b 51 chr2L 18359950 18359989 roo 8691 3 10 39 '7-3 65.37 8.6 1.0 intron Fas3 + chr2L_10_18355001 chr2L_18355001 0.70 RAL-409_95b 52 chr2L 18570471 18570544 FB 4 32 7 73 '3-4 70.33 1.8 2.5 intron Pde11 - chr2L_7_18570001 chr2L_18570001 0.43 RAL-409_95b 53 chr2L 18675595 18675693 412 7 2 8 98 '4-4 64.14 6.8 1.0 exon Mst36Fa - chr2L_8_18675001 chr2L_18675001 0.50 RAL-409_95b 54 chr2L 18694006 18694084 pogo 2084 3 7 78 '4-3 62.14 2.4 2.1 intron CG10383 - chr2L_7_18690001 chr2L_18690001 0.57 RAL-409_95b 55 chr2L 18749830 18749927 pogo 2096 10 12 97 '7-5 69.94 3.6 2.6 intergenic not near genes chr2L_12_18745001 chr2L_18745001 0.58 RAL-409_95b 56 chr2L 19320438 19320528 Juan 4207 13 9 90 '1-8 62.42 2.4 2.6 intergenic not near genes chr2L_9_19320001 chr2L_19320001 0.11 RAL-409_95b 57 chr2L 19602827 19602932 hobo 2933 7 6 105 '1-5 65.24 3.9 1.2 intron,intron Lar +,CR44978 - chr2L_6_19600001 chr2L_19600001 0.17 RAL-409_95b 58 chr2L 19678168 19678193 flea 4772 4768 9 25 '7-2 62.46 2.8 2.4 intron Lar + chr2L_9_19675001 chr2L_19675001 0.78 RAL-409_95b 59 chr2L 19681428 19681503 hopper 1402 1407 6 75 '5-1 66.39 3.7 1.3 intron Lar + chr2L_6_19680001 chr2L_19680001 0.83 RAL-409_95b 60 chr2L 19808487 19808599 copia 4878 256 9 112 '5-4 66.63 1.8 3.2 intron sick + chr2L_9_19805001 chr2L_19805001 0.56 RAL-409_95b 61 chr2L 20148573 20148628 P-element 7 2850 6 55 '3-3 41.02 2.9 1.5 intergenic not near genes chr2L_6_20145001 chr2L_20145001 0.50 RAL-409_95b 62 chr2L 20398464 20398552 roo 3 401 14 88 '7-7 66.14 4.3 2.6 intron CG10947 - chr2L_14_20395001 chr2L_20395001 0.50 RAL-409_95b 63 chr2L 20526032 20526106 hopper 18 3 7 74 '3-4 60.31 3.9 1.4 intergenic not near genes chr2L_7_20525001 chr2L_20525001 0.43 RAL-409_95b 64 chr2L 20797650 20797748 P-element 13 2884 13 98 '7-6 46.83 5.5 2.0 intergenic CG9328 + chr2L_13_20795001 chr2L_20795001 0.54 RAL-409_95b 65 chr2L 20841946 20841973 G6 1995 2018 10 27 '5-5 59.38 8.7 1.0 intron CG31676 + chr2L_10_20840001 chr2L_20840001 0.50 RAL-409_95b 66 chr2L 20902932 20903012 roo 9065 8664 8 80 '2-6 65.16 1.5 3.2 intron,intron CG43739 -,sky - chr2L_8_20900001 chr2L_20900001 0.25 RAL-409_95b 67 chr2L 21034041 21034138 412 7531 9 12 97 '3-9 62.23 4.8 2.1 intron CG42238 - chr2L_12_21030001 chr2L_21030001 0.25 RAL-409_95b 68 chr2L 21089211 21089245 flea 4767 4767 7 34 '3-4 67.22 5.0 1.2 intergenic CG9259 +,ppk13 - chr2L_7_21085001 chr2L_21085001 0.43 RAL-409_95b 69 chr2L 21570234 21570261 Dm88 4396 4371 7 27 '5-2 63.16 2.3 2.1 intergenic not near genes chr2L_7_21570001 chr2L_21570001 0.71 RAL-409_95b 70 chr2L 21855587 21855688 412 496 19 13 101 '6-7 62.68 1.5 5.2 intron CR44917 + chr2L_13_21855001 chr2L_21855001 0.46 RAL-409_95b 71 chr2L 22208958 22209015 copia 238 4867 6 57 '2-4 67.92 4.0 1.2 intron Ir40a - chr2L_6_22205001 chr2L_22205001 0.33 RAL-409_95b 72 chr2L 23068859 23068935 1360 3374 5 8 76 '3-5 63.98 3.3 1.9 intergenic CR43242 +,Spf45 - chr2L_8_23065001 chr2L_23065001 0.38 RAL-409_95b 73 chr2R 954517 954551 Quasimodo 20 4 4 34 '3-1 68.20 3.3 0.9 intergenic not near genes chr2R_4_950001 chr2R_950001 0.75 RAL-409_95b 74 chr2R 1320681 1320710 diver2 353 346 6 29 '1-5 51.45 14.6 0.4 intergenic not near genes chr2R_6_1320001 chr2R_1320001 0.17 RAL-409_95b 75 chr2R 1338221 1338332 mdg3 5252 5498 13 111 '6-7 65.60 4.5 2.4 intergenic not near genes chr2R_13_1335001 chr2R_1335001 0.46 RAL-409_95b 76 chr2R 1515896 1515969 Juan 10 4205 9 73 '3-6 63.89 14.2 0.6 exon Maf1 - chr2R_9_1515001 chr2R_1515001 0.33 RAL-409_95b 77 chr2R 4160341 4160411 pogo 34 2098 10 70 '3-7 68.81 3.5 2.2 intergenic not near genes chr2R_10_4160001 chr2R_4160001 0.30 RAL-409_95b 78 chr2R 4909235 4909334 roo 8663 409 12 99 '10-2 61.26 3.4 2.7 intergenic not near genes chr2R_12_4905001 chr2R_4905001 0.83 RAL-409_95b 79 chr2R 5110497 5110591 1360 5 3373 25 94 '9-16 67.59 3.1 6.1 intergenic not near genes chr2R_25_5110001 chr2R_5110001 0.36 RAL-409_95b 80 chr2R 5284540 5284582 Doc4-element 2642 2620 11 42 '1-10 56.77 5.3 1.7 intron d4 + chr2R_11_5280001 chr2R_5280001 0.09 RAL-409_95b 81 chr2R 5413423 5413478 Juan 4197 4036 5 55 '1-4 61.18 4.1 1.0 intergenic laccase2 + chr2R_5_5410001 chr2R_5410001 0.20 RAL-409_95b 82 chr2R 5674666 5674741 S-element 1677 1703 4 75 '1-3 68.89 0.8 2.2 intergenic not near genes chr2R_4_5670001 chr2R_5670001 0.25 RAL-409_95b 83 chr2R 6779776 6779850 17.6 475 6941 14 74 '3-11 68.07 4.9 2.4 intron,3` UTR Epac -,Cyp6a2 - chr2R_14_6775001 chr2R_6775001 0.21 RAL-409_95b 84 chr2R 7008513 7008624 roo 8665 407 10 111 '3-7 68.08 1.6 3.8 3` UTR Tsp42Ec + chr2R_10_7005001 chr2R_7005001 0.30 RAL-409_95b 85 chr2R 7131227 7131343 Transpac 310 4924 18 116 '8-10 66.95 4.8 3.1 exon Cyp9b2 - chr2R_18_7130001 chr2R_7130001 0.44 RAL-409_95b 86 chr2R 7232685 7232731 jockey 34 9 13 46 '4-9 67.59 6.1 1.8 intergenic Or43a - chr2R_13_7230001 chr2R_7230001 0.31 RAL-409_95b 87 chr2R 7605117 7605186 jockey 4973 4546 11 69 '5-6 58.01 4.5 2.0 intron CG1358 - chr2R_11_7605001 chr2R_7605001 0.45 RAL-409_95b 88 chr2R 7896675 7896767 diver 5891 219 13 92 '5-8 65.91 4.5 2.4 intron CG30377 + chr2R_13_7895001 chr2R_7895001 0.38 RAL-409_95b 89 chr2R 7955108 7955168 FB 23 8 5 60 '3-2 67.07 1.4 2.1 intron CG14764 - chr2R_5_7955001 chr2R_7955001 0.60 RAL-409_95b 90 chr2R 8086860 8086946 1360 5 17 22 86 '12-10 69.53 3.7 4.7 3` UTR sut1 + chr2R_22_8085001 chr2R_8085001 0.55 RAL-409_95b 91 chr2R 8158853 8158892 pogo 1 42 9 39 '4-5 68.11 5.8 1.3 intergenic not near genes chr2R_9_8155001 chr2R_8155001 0.44 RAL-409_95b 92 chr2R 8310863 8310925 pogo 2089 9 9 62 '3-6 62.66 6.0 1.3 3` UTR CR44449 - chr2R_9_8310001 chr2R_8310001 0.33 RAL-409_95b 93 chr2R 8311203 8311300 hobo 9 2931 12 97 '8-4 63.75 4.9 2.0 intergenic CR44449 -,CR44450 + chr2R_12_8310001 chr2R_8310001 0.67 RAL-409_95b 94 chr2R 8673422 8673462 jockey 4766 4793 7 40 '3-4 60.20 4.5 1.3 intron Acsl + chr2R_7_8670001 chr2R_8670001 0.43 RAL-409_95b 95 chr2R 9007053 9007123 jockey 18 4987 7 70 '5-2 57.26 5.1 1.1 intergenic CG8172 -,Np - chr2R_7_9005001 chr2R_9005001 0.71 RAL-409_95b 96 chr2R 9035641 9035744 17.6 4 7404 9 103 '3-6 64.67 6.2 1.2 intergenic not near genes chr2R_9_9035001 chr2R_9035001 0.33 RAL-409_95b 97 chr2R 9552269 9552382 S-element 7 1712 7 113 '5-2 65.85 4.2 1.3 intergenic not near genes chr2R_7_9550001 chr2R_9550001 0.71 RAL-409_95b 98 chr2R 9790727 9790788 Stalker4 392 6958 10 61 '3-7 62.04 4.3 1.9 intron,5` UTR CG1688 -,CR44208 + chr2R_10_9790001 chr2R_9790001 0.30 RAL-409_95b 99 chr2R 9854012 9854138 pogo 7 2098 21 126 '12-9 67.72 4.6 3.8 intron CG1516 - chr2R_21_9850001 chr2R_9850001 0.57 RAL-409_95b 100 chr2R 9870970 9871072 roo 395 8661 15 102 '5-10 63.84 2.1 4.8 intron cbx - chr2R_15_9870001 chr2R_9870001 0.33 RAL-409_95b 101 chr2R 10135670 10135755 mdg3 5252 243 14 85 '12-2 66.29 5.6 2.1 exon gem + chr2R_14_10135001 chr2R_10135001 0.86 RAL-409_95b 102 chr2R 10351150 10351240 mdg3 249 5260 8 90 '3-5 66.57 0.7 4.7 intron CG42732 - chr2R_8_10350001 chr2R_10350001 0.38 RAL-409_95b 103 chr2R 10411355 10411446 flea 4769 249 6 91 '3-3 66.82 4.7 1.1 intron CG42732 - chr2R_6_10410001 chr2R_10410001 0.50 RAL-409_95b 104 chr2R 10551799 10551872 P-element 7 2868 15 73 '4-11 46.48 2.4 4.4 intergenic not near genes chr2R_15_10550001 chr2R_10550001 0.27 RAL-409_95b 105 chr2R 11394090 11394189 pogo 7 2081 8 99 '6-2 57.34 3.7 1.7 intron sprt - chr2R_8_11390001 chr2R_11390001 0.75 RAL-409_95b 106 chr2R 11951780 11951900 pogo 3 2100 9 120 '5-4 68.95 3.9 1.8 intron CG13188 + chr2R_9_11950001 chr2R_11950001 0.56 RAL-409_95b 107 chr2R 12185313 12185427 accord 7380 2 22 114 '7-15 65.09 11.0 1.8 3` UTR,3` UTR CG13175 +,CG33964 + chr2R_22_12185001 chr2R_12185001 0.32 RAL-409_95b 108 chr2R 12534530 12534586 FB 21 38 6 56 '3-3 63.83 4.6 1.1 intron fra + chr2R_6_12530001 chr2R_12530001 0.50 RAL-409_95b 109 chr2R 12545382 12545453 opus 13 7488 7 71 '2-5 66.96 3.4 1.6 intron fra + chr2R_7_12545001 chr2R_12545001 0.29 RAL-409_95b 110 chr2R 12677510 12677588 Tirant 399 16 10 78 '5-5 61.16 1.3 4.3 intron CG42708 - chr2R_10_12675001 chr2R_12675001 0.50 RAL-409_95b 111 chr2R 12832742 12832853 roo 398 8663 17 111 '6-11 67.63 2.8 4.5 intergenic not near genes chr2R_17_12830001 chr2R_12830001 0.35 RAL-409_95b 112 chr2R 12979442 12979524 Tirant 400 22 8 82 '6-2 63.30 3.1 2.0 intron Psc - chr2R_8_12975001 chr2R_12975001 0.75 RAL-409_95b 113 chr2R 13571340 13571421 copia 8 248 4 81 '2-2 59.23 2.7 1.1 3` UTR CG42807 - chr2R_4_13570001 chr2R_13570001 0.50 RAL-409_95b 114 chr2R 13706224 13706330 blood 7378 4 18 106 '11-7 62.51 5.7 2.7 intron fas + chr2R_18_13705001 chr2R_13705001 0.61 RAL-409_95b 115 chr2R 14083327 14083403 Stalker2 7612 7251 11 76 '3-8 67.22 2.1 3.5 intron Prosap - chr2R_11_14080001 chr2R_14080001 0.27 RAL-409_95b 116 chr2R 15190389 15190501 pogo 2097 4 6 112 '4-2 69.09 2.5 1.7 intergenic igl + chr2R_6_15190001 chr2R_15190001 0.67 RAL-409_95b 117 chr2R 15371751 15371859 roo 8669 401 22 108 '12-10 69.43 3.3 5.1 5` UTR CR44458 + chr2R_22_15370001 chr2R_15370001 0.55 RAL-409_95b 118 chr2R 15638270 15638317 hobo 2 20 10 47 '5-5 68.22 3.8 2.1 intron CG42524 + chr2R_10_15635001 chr2R_15635001 0.50 RAL-409_95b 119 chr2R 16381298 16381358 hobo 2932 11 6 60 '2-4 63.04 8.9 0.6 3` UTR CG43187 + chr2R_6_16380001 chr2R_16380001 0.33 RAL-409_95b 120 chr2R 17347473 17347530 hobo 2928 49 7 57 '4-3 63.55 5.0 1.2 intron mbl + chr2R_7_17345001 chr2R_17345001 0.57 RAL-409_95b 121 chr2R 18349142 18349195 Doc 19 1 7 53 '6-1 68.01 3.5 1.6 intron sbb - chr2R_7_18345001 chr2R_18345001 0.86 RAL-409_95b 122 chr2R 18715250 18715330 hobo 2926 10 19 80 '6-13 61.80 4.2 3.7 intergenic not near genes chr2R_19_18715001 chr2R_18715001 0.32 RAL-409_95b 123 chr2R 18725436 18725541 flea 4767 5013 10 105 '8-2 63.66 4.5 1.8 intron Hs3st-A + chr2R_10_18725001 chr2R_18725001 0.80 RAL-409_95b 124 chr2R 18985236 18985317 roo 8692 401 8 81 '2-6 62.58 4.2 1.5 intergenic not near genes chr2R_8_18985001 chr2R_18985001 0.25 RAL-409_95b 125 chr2R 19192243 19192313 412 7539 25 16 70 '7-9 60.83 4.5 2.9 intron hppy + chr2R_16_19190001 chr2R_19190001 0.44 RAL-409_95b 126 chr2R 19216347 19216418 17.6 7418 6957 6 71 '2-4 65.48 2.6 1.7 intron hppy + chr2R_6_19215001 chr2R_19215001 0.33 RAL-409_95b 127 chr2R 19234444 19234531 1360 3387 8 14 87 '8-6 64.25 5.2 2.3 intron cora + chr2R_14_19230001 chr2R_19230001 0.57 RAL-409_95b 128 chr2R 19325591 19325626 P-element 25 2879 12 35 '7-5 53.24 2.0 4.0 intron Rgk1 - chr2R_12_19325001 chr2R_19325001 0.58 RAL-409_95b 129 chr2R 19471872 19471965 1360 7 8 21 93 '8-13 66.13 4.4 3.9 intron par-1 + chr2R_21_19470001 chr2R_19470001 0.38 RAL-409_95b 130 chr2R 19605746 19605798 roo 403 8667 10 52 '2-8 66.97 1.8 3.6 intron sm - chr2R_10_19605001 chr2R_19605001 0.20 RAL-409_95b 131 chr2R 19634526 19634617 roo 394 8671 5 91 '4-1 66.99 3.3 1.2 5` UTR CR44503 + chr2R_5_19630001 chr2R_19630001 0.80 RAL-409_95b 132 chr2R 19697104 19697213 rover 7297 6954 14 109 '3-11 67.90 3.9 2.9 5` UTR CR44506 + chr2R_14_19695001 chr2R_19695001 0.21 RAL-409_95b 133 chr2R 19844011 19844084 I-element 5342 6 4 73 '3-1 64.64 4.0 0.8 intergenic CG44569 - chr2R_4_19840001 chr2R_19840001 0.75 RAL-409_95b 134 chr2R 20418864 20418900 Max-element 8533 8243 9 36 '3-6 64.33 2.6 2.5 intergenic not near genes chr2R_9_20415001 chr2R_20415001 0.33 RAL-409_95b 135 chr2R 20423013 20423045 hobo 33 20 14 32 '11-3 63.04 1.0 7.0 intergenic not near genes chr2R_14_20420001 chr2R_20420001 0.79 RAL-409_95b 136 chr2R 20454548 20454619 mdg1 19 7444 5 71 '3-2 52.58 0.2 4.2 intron CG12484 + chr2R_5_20450001 chr2R_20450001 0.60 RAL-409_95b 137 chr2R 20841290 20841361 hobo 2930 15 8 71 '1-7 58.54 2.4 2.4 intergenic not near genes chr2R_8_20840001 chr2R_20840001 0.12 RAL-409_95b 138 chr2R 20843581 20843648 I-element 5330 10 5 67 '2-3 61.57 2.5 1.4 intergenic not near genes chr2R_5_20840001 chr2R_20840001 0.40 RAL-409_95b 139 chr2R 21145871 21145975 Quasimodo 12 7366 8 104 '5-3 70.89 4.5 1.5 intergenic Xbp1 +,Hmg-2 + chr2R_8_21145001 chr2R_21145001 0.62 RAL-409_95b 140 chr2R 21402989 21403063 hobo 2915 17 10 74 '4-6 55.45 3.5 2.2 intron Sdc - chr2R_10_21400001 chr2R_21400001 0.40 RAL-409_95b 141 chr2R 21797180 21797263 Burdock 1 246 10 83 '6-4 64.80 1.4 4.2 intergenic CG34204 + chr2R_10_21795001 chr2R_21795001 0.60 RAL-409_95b 142 chr2R 22141701 22141760 copia 253 4877 10 59 '3-7 63.52 5.6 1.5 intron a + chr2R_10_22140001 chr2R_22140001 0.30 RAL-409_95b 143 chr2R 22229519 22229549 jockey 4678 4713 4 30 '1-3 58.72 7.5 0.5 intergenic not near genes chr2R_4_22225001 chr2R_22225001 0.25 RAL-409_95b 144 chr2R 22390690 22390802 jockey 12 4987 17 112 '11-6 64.17 4.4 3.1 intron CG13506 + chr2R_17_22390001 chr2R_22390001 0.65 RAL-409_95b 145 chr2R 22427231 22427332 297 6959 5 9 101 '4-5 66.43 2.3 2.7 intergenic ppk12 +,CG10344 - chr2R_9_22425001 chr2R_22425001 0.44 RAL-409_95b 146 chr2R 22788991 22789077 mdg1 416 7 9 86 '8-1 64.66 4.2 1.7 intron CG42260 - chr2R_9_22785001 chr2R_22785001 0.89 RAL-409_95b 147 chr2R 23031956 23032059 roo 403 8664 24 103 '10-14 68.31 2.4 7.1 intron,intron twi +,CG42741 - chr2R_24_23030001 chr2R_23030001 0.42 RAL-409_95b 148 chr2R 23410066 23410151 diver 225 5900 16 85 '9-7 61.38 5.3 2.5 intergenic not near genes chr2R_16_23410001 chr2R_23410001 0.56 RAL-409_95b 149 chr2R 24334113 24334204 P-element 129 1 10 91 '3-7 54.84 3.3 2.3 5` UTR slbo - chr2R_10_24330001 chr2R_24330001 0.30 RAL-409_95b 150 chr3L 40577 40621 P-element 6 2883 6 44 '5-1 43.79 4.3 1.1 intergenic not near genes chr3L_6_40001 chr3L_40001 0.83 RAL-409_95b 151 chr3L 223356 223424 FB 5 28 11 68 '7-4 62.30 5.8 1.6 intergenic pyx -,CG33229 + chr3L_11_220001 chr3L_220001 0.64 RAL-409_95b 152 chr3L 1041718 1041749 hobo 13 28 7 31 '4-3 63.66 3.2 1.7 intron bab1 - chr3L_7_1040001 chr3L_1040001 0.57 RAL-409_95b 153 chr3L 1085293 1085324 hopper 1410 5 5 31 '4-1 64.06 1.1 2.4 intron bab1 - chr3L_5_1085001 chr3L_1085001 0.80 RAL-409_95b 154 chr3L 1337108 1337219 blood 372 7011 26 111 '13-13 66.06 6.5 3.5 intron l(3)02640 + chr3L_26_1335001 chr3L_1335001 0.50 RAL-409_95b 155 chr3L 2036897 2036974 Tabor 7321 4 17 77 '5-12 60.65 4.6 3.0 intergenic CG42355 - chr3L_17_2035001 chr3L_2035001 0.29 RAL-409_95b 156 chr3L 2329220 2329257 412 491 7532 5 37 '2-3 62.14 4.4 0.9 intron MsR1 + chr3L_5_2325001 chr3L_2325001 0.40 RAL-409_95b 157 chr3L 2330038 2330082 412 25 7 4 44 '2-2 60.67 4.0 0.8 intron MsR1 + chr3L_4_2330001 chr3L_2330001 0.50 RAL-409_95b 158 chr3L 3032167 3032255 roo 12 9051 17 88 '13-4 66.89 3.9 3.5 intergenic not near genes chr3L_17_3030001 chr3L_3030001 0.76 RAL-409_95b 159 chr3L 3199008 3199113 P-element 2885 2884 17 105 '9-8 49.40 10.5 1.5 5` UTR CG32276 - chr3L_17_3195001 chr3L_3195001 0.53 RAL-409_95b 160 chr3L 3540142 3540213 mdg3 5488 5260 8 71 '1-7 59.88 3.6 1.7 intron Eip63E + chr3L_8_3540001 chr3L_3540001 0.12 RAL-409_95b 161 chr3L 4101257 4101306 Juan 4023 4186 7 49 '5-2 69.20 4.5 1.3 intron CG14995 - chr3L_7_4100001 chr3L_4100001 0.71 RAL-409_95b 162 chr3L 4846509 4846580 Juan 11 4192 7 71 '4-3 64.82 3.6 1.5 intergenic not near genes chr3L_7_4845001 chr3L_4845001 0.57 RAL-409_95b 163 chr3L 6218623 6218694 P-element 2873 8 5 71 '3-2 49.29 3.6 1.1 intergenic not near genes chr3L_5_6215001 chr3L_6215001 0.60 RAL-409_95b 164 chr3L 6405407 6405468 hopper 1399 24 6 61 '3-3 59.24 2.7 1.6 intron CG42747 + chr3L_6_6405001 chr3L_6405001 0.50 RAL-409_95b 165 chr3L 6520663 6520750 hopper 1411 4 12 87 '6-6 62.92 4.7 2.1 intron sfl + chr3L_12_6520001 chr3L_6520001 0.50 RAL-409_95b 166 chr3L 7157812 7157842 297 6961 392 6 30 '5-1 58.62 4.3 1.1 intergenic CG8620 + chr3L_6_7155001 chr3L_7155001 0.83 RAL-409_95b 167 chr3L 7310724 7310822 roo 3 9055 12 98 '3-9 65.40 3.5 2.7 intron unc-13-4A - chr3L_12_7310001 chr3L_7310001 0.25 RAL-409_95b 168 chr3L 7646248 7646331 opus 489 7 12 83 '5-7 69.55 4.5 2.2 intergenic not near genes chr3L_12_7645001 chr3L_7645001 0.42 RAL-409_95b 169 chr3L 8707861 8707925 HMS-Beagle 216 6802 7 64 '2-5 63.04 0.9 3.7 intergenic not near genes chr3L_7_8705001 chr3L_8705001 0.29 RAL-409_95b 170 chr3L 9373589 9373687 P-element 11 2879 10 98 '3-7 52.23 3.9 2.0 5` UTR,3` UTR Hsp22 +,Hsp67Bb + chr3L_10_9370001 chr3L_9370001 0.30 RAL-409_95b 171 chr3L 9420507 9420597 P-element 24 3 20 90 '10-10 50.26 7.7 2.3 intron CG3967 - chr3L_20_9420001 chr3L_9420001 0.50 RAL-409_95b 172 chr3L 9907298 9907355 BS 5013 5064 6 57 '3-3 59.49 0.5 4.0 intergenic not near genes chr3L_6_9905001 chr3L_9905001 0.50 RAL-409_95b 173 chr3L 10092973 10093089 roo 1 407 15 116 '11-4 69.77 3.8 3.1 intron,exon dpr6 +,CG32054 - chr3L_15_10090001 chr3L_10090001 0.73 RAL-409_95b 174 chr3L 10122811 10122870 hobo 2912 9 13 59 '5-8 60.94 3.2 3.1 intron dpr6 + chr3L_13_10120001 chr3L_10120001 0.38 RAL-409_95b 175 chr3L 10300919 10301002 3S18 5772 342 6 83 '4-2 44.62 0.7 3.5 intergenic not near genes chr3L_6_10300001 chr3L_10300001 0.67 RAL-409_95b 176 chr3L 10544785 10544832 Doc 29 2 10 47 '5-5 65.90 2.2 3.1 intron A2bp1 + chr3L_10_10540001 chr3L_10540001 0.50 RAL-409_95b 177 chr3L 10669311 10669414 S-element 1707 1710 8 103 '5-3 63.23 3.0 2.0 intron simj + chr3L_8_10665001 chr3L_10665001 0.62 RAL-409_95b 178 chr3L 10698936 10698964 3S18 6081 6081 5 28 '2-3 61.13 3.7 1.1 intergenic not near genes chr3L_5_10695001 chr3L_10695001 0.40 RAL-409_95b 179 chr3L 10844352 10844426 412 7542 7080 11 74 '6-5 62.98 3.1 2.7 intergenic not near genes chr3L_11_10840001 chr3L_10840001 0.55 RAL-409_95b 180 chr3L 11214206 11214279 diver 5897 186 7 73 '4-3 62.03 2.0 2.3 intergenic CG7600 +,CG42671 + chr3L_7_11210001 chr3L_11210001 0.57 RAL-409_95b 181 chr3L 11661700 11661790 hopper 1410 6 9 90 '7-2 63.20 5.5 1.4 intron CG32085 - chr3L_9_11660001 chr3L_11660001 0.78 RAL-409_95b 182 chr3L 12415109 12415211 1360 15 2 21 102 '12-9 66.36 3.5 4.7 3` UTR ArfGAP1 - chr3L_21_12415001 chr3L_12415001 0.57 RAL-409_95b 183 chr3L 13080832 13080876 Doc 31 5 14 44 '9-5 63.50 4.5 2.5 intergenic CR43652 - chr3L_14_13080001 chr3L_13080001 0.64 RAL-409_95b 184 chr3L 13454803 13454887 jockey 4990 4757 12 84 '5-7 62.73 4.4 2.2 intron CG10738 + chr3L_12_13450001 chr3L_13450001 0.42 RAL-409_95b 185 chr3L 13472884 13472984 roo 8662 398 19 100 '10-9 64.71 3.9 3.9 intron CG10089 - chr3L_19_13470001 chr3L_13470001 0.53 RAL-409_95b 186 chr3L 14119024 14119080 hobo 2926 7 12 56 '3-9 61.53 4.6 2.1 intron Sox21b - chr3L_12_14115001 chr3L_14115001 0.25 RAL-409_95b 187 chr3L 14309286 14309366 1360 21 3384 12 80 '5-7 65.76 1.7 4.4 intron fz + chr3L_12_14305001 chr3L_14305001 0.42 RAL-409_95b 188 chr3L 14376545 14376643 pogo 5 2083 14 98 '10-4 64.10 2.5 4.0 intergenic not near genes chr3L_14_14375001 chr3L_14375001 0.71 RAL-409_95b 189 chr3L 14383171 14383219 Doc 3 32 7 48 '2-5 64.20 2.7 1.9 3` UTR CG43120 + chr3L_7_14380001 chr3L_14380001 0.29 RAL-409_95b 190 chr3L 14387588 14387665 pogo 2072 17 4 77 '1-3 63.50 1.7 1.5 intergenic not near genes chr3L_4_14385001 chr3L_14385001 0.25 RAL-409_95b 191 chr3L 14848750 14848825 roo 8 397 9 75 '5-4 64.35 3.5 2.0 intron CG17839 + chr3L_9_14845001 chr3L_14845001 0.56 RAL-409_95b 192 chr3L 16170575 16170669 Tirant 8121 401 10 94 '3-7 66.45 2.1 3.2 intergenic CG33795 -,CG33796 - chr3L_10_16170001 chr3L_16170001 0.30 RAL-409_95b 193 chr3L 16206976 16207053 roo 405 3 11 77 '3-8 73.55 2.3 3.3 intergenic not near genes chr3L_11_16205001 chr3L_16205001 0.27 RAL-409_95b 194 chr3L 16236541 16236590 Juan 4024 4204 4 49 '3-1 63.55 2.1 1.3 3` UTR l(3)72Dp + chr3L_4_16235001 chr3L_16235001 0.75 RAL-409_95b 195 chr3L 16533399 16533497 412 1 491 9 98 '8-1 63.83 3.3 2.1 intron CG43373 - chr3L_9_16530001 chr3L_16530001 0.89 RAL-409_95b 196 chr3L 16734189 16734247 412 494 7091 12 58 '10-2 63.62 2.8 3.2 intron CG9701 + chr3L_12_16730001 chr3L_16730001 0.83 RAL-409_95b 197 chr3L 16971647 16971680 R1A1-element 5330 5312 4 33 '1-3 57.59 3.7 0.9 intron Exn + chr3L_4_16970001 chr3L_16970001 0.25 RAL-409_95b 198 chr3L 17136168 17136258 hobo 2930 17 6 90 '1-5 63.32 3.4 1.4 intron Rbp6 - chr3L_6_17135001 chr3L_17135001 0.17 RAL-409_95b 199 chr3L 17916067 17916100 roo 8693 8665 9 33 '5-4 57.20 2.0 3.0 intergenic not near genes chr3L_9_17915001 chr3L_17915001 0.56 RAL-409_95b 200 chr3L 18122300 18122384 invader1 399 14 5 84 '3-2 53.19 3.4 1.1 intergenic CG42853 - chr3L_5_18120001 chr3L_18120001 0.60 RAL-409_95b 201 chr3L 18320145 18320247 297 12 390 10 102 '7-3 69.50 4.4 1.9 intergenic not near genes chr3L_10_18320001 chr3L_18320001 0.70 RAL-409_95b 202 chr3L 18400883 18400944 I-element 3 5320 13 61 '5-8 64.43 5.0 2.2 intergenic not near genes chr3L_13_18400001 chr3L_18400001 0.38 RAL-409_95b 203 chr3L 18636258 18636339 FB 8 24 11 81 '7-4 64.28 4.0 2.2 intron MYPT-75D + chr3L_11_18635001 chr3L_18635001 0.64 RAL-409_95b 204 chr3L 18646116 18646197 hopper 2 4 6 81 '5-1 65.19 4.8 1.0 intron MYPT-75D + chr3L_6_18645001 chr3L_18645001 0.83 RAL-409_95b 205 chr3L 18742617 18742696 Tabor 7315 6848 8 79 '3-5 60.62 1.9 2.8 intergenic not near genes chr3L_8_18740001 chr3L_18740001 0.38 RAL-409_95b 206 chr3L 18891489 18891564 roo 25 405 6 75 '2-4 63.80 3.3 1.4 intergenic not near genes chr3L_6_18890001 chr3L_18890001 0.33 RAL-409_95b 207 chr3L 18958365 18958453 mdg3 247 5262 13 88 '4-9 66.68 2.9 3.3 intergenic not near genes chr3L_13_18955001 chr3L_18955001 0.31 RAL-409_95b 208 chr3L 19339401 19339431 Tc1 19 17 8 30 '3-5 62.80 1.1 3.8 intergenic not near genes chr3L_8_19335001 chr3L_19335001 0.38 RAL-409_95b 209 chr3L 19349935 19350011 1360 5 3205 9 76 '6-3 63.14 3.1 2.2 intron CG32206 - chr3L_9_19345001 chr3L_19345001 0.67 RAL-409_95b 210 chr3L 19396896 19396947 Doc 3 38 14 51 '5-9 67.03 3.6 3.0 intron CG32206 - chr3L_14_19395001 chr3L_19395001 0.36 RAL-409_95b 211 chr3L 19613641 19613757 Transpac 307 1 18 116 '8-10 66.85 5.7 2.7 3` UTR l(3)76BDm - chr3L_18_19610001 chr3L_19610001 0.44 RAL-409_95b 212 chr3L 19788123 19788193 FB 18 17 5 70 '1-4 61.42 3.9 1.0 intron,intron CG42637 -,Gyc76C - chr3L_5_19785001 chr3L_19785001 0.20 RAL-409_95b 213 chr3L 19951179 19951267 Ivk 5 5379 6 88 '5-1 65.31 2.1 1.9 intron Ac76E + chr3L_6_19950001 chr3L_19950001 0.83 RAL-409_95b 214 chr3L 20038518 20038561 G2 2638 2656 5 43 '3-2 68.64 4.0 1.0 intergenic not near genes chr3L_5_20035001 chr3L_20035001 0.60 RAL-409_95b 215 chr3L 20689660 20689695 roo 8685 9044 7 35 '5-2 67.39 4.3 1.3 intergenic not near genes chr3L_7_20685001 chr3L_20685001 0.71 RAL-409_95b 216 chr3L 20850105 20850145 Juan 2 18 5 40 '3-2 61.97 4.8 0.9 intron CG32432 - chr3L_5_20850001 chr3L_20850001 0.60 RAL-409_95b 217 chr3L 21542836 21542925 roo 9064 8680 16 89 '7-9 62.00 4.6 2.9 exon CG33290 + chr3L_16_21540001 chr3L_21540001 0.44 RAL-409_95b 218 chr3L 21820143 21820225 roo 9046 12 14 82 '3-11 67.02 2.9 3.6 intergenic not near genes chr3L_14_21820001 chr3L_21820001 0.21 RAL-409_95b 219 chr3L 21864775 21864892 pogo 2100 2 18 117 '8-10 66.97 3.9 3.7 intron mub + chr3L_18_21860001 chr3L_21860001 0.44 RAL-409_95b 220 chr3L 22458851 22458932 roo 9050 8678 11 81 '9-2 66.56 4.2 2.1 3` UTR laza - chr3L_11_22455001 chr3L_22455001 0.82 RAL-409_95b 221 chr3L 22697656 22697763 3S18 5 332 11 107 '6-5 62.54 3.8 2.3 3` UTR CG32453 + chr3L_11_22695001 chr3L_22695001 0.55 RAL-409_95b 222 chr3L 22755102 22755160 copia 237 24 5 58 '2-3 66.44 3.3 1.2 intron SPoCk + chr3L_5_22755001 chr3L_22755001 0.40 RAL-409_95b 223 chr3L 22885110 22885149 jockey 14 30 10 39 '5-5 60.89 6.7 1.3 intron slif + chr3L_10_22885001 chr3L_22885001 0.50 RAL-409_95b 224 chr3L 23146470 23146506 1360 3380 25 14 36 '2-12 63.60 8.4 1.5 intergenic not near genes chr3L_14_23145001 chr3L_23145001 0.14 RAL-409_95b 225 chr3L 23236481 23236597 Stalker2 403 7245 18 116 '5-13 64.04 5.3 2.9 intron nAChRalpha4 + chr3L_18_23235001 chr3L_23235001 0.28 RAL-409_95b 226 chr3L 23257480 23257579 blood 13 378 11 99 '7-4 64.60 2.8 2.9 intron nAChRalpha4 + chr3L_11_23255001 chr3L_23255001 0.64 RAL-409_95b 227 chr3L 23854736 23854835 297 387 2 6 99 '2-4 67.95 12.3 0.5 intron CG40470 - chr3L_6_23850001 chr3L_23850001 0.33 RAL-409_95b 228 chr3L 25232764 25232872 accord2 7629 7433 4 108 '3-1 61.40 4.8 0.7 intergenic not near genes chr3L_4_25230001 chr3L_25230001 0.75 RAL-409_95b 229 chr3L 25414189 25414266 blood 7386 2 16 77 '7-9 68.39 3.8 3.3 intergenic not near genes chr3L_16_25410001 chr3L_25410001 0.44 RAL-409_95b 230 chr3L 25752801 25752889 Transpac 4931 306 7 88 '5-2 62.73 1.4 2.9 intergenic CG17374 - chr3L_7_25750001 chr3L_25750001 0.71 RAL-409_95b 231 chr3L 27145267 27145295 1360 3370 8 8 28 '7-1 62.10 0.0 8.0 intron vtd + chr3L_8_27145001 chr3L_27145001 0.88 RAL-409_95b 232 chr3L 27174900 27175001 pogo 2095 15 6 101 '2-4 64.04 2.1 1.9 intergenic not near genes chr3L_6_27170001 chr3L_27170001 0.33 RAL-409_95b 233 chr3R 1023391 1023436 F-element 31 12 7 45 '3-4 65.17 2.8 1.8 intergenic not near genes chr3R_7_1020001 chr3R_1020001 0.43 RAL-409_95b 234 chr3R 2275581 2275676 opus 7026 498 6 95 '2-4 67.66 2.1 1.9 intergenic not near genes chr3R_6_2275001 chr3R_2275001 0.33 RAL-409_95b 235 chr3R 3211933 3211983 roo 378 8685 4 50 '1-3 67.52 1.8 1.4 intron CG42617 - chr3R_4_3210001 chr3R_3210001 0.25 RAL-409_95b 236 chr3R 4514522 4514589 Tabor 6 7310 7 67 '5-2 64.84 4.6 1.2 intron CG34357 - chr3R_7_4510001 chr3R_4510001 0.71 RAL-409_95b 237 chr3R 4549230 4549307 1731 311 22 4 77 '1-3 61.27 1.9 1.4 intron CG34357 - chr3R_4_4545001 chr3R_4545001 0.25 RAL-409_95b 238 chr3R 4554291 4554364 Bari1 1700 24 8 73 '5-3 66.84 4.8 1.4 intron CG34357 - chr3R_8_4550001 chr3R_4550001 0.62 RAL-409_95b 239 chr3R 4781109 4781205 P-element 2883 7 17 96 '7-10 46.43 4.8 2.9 intergenic CG17387 - chr3R_17_4780001 chr3R_4780001 0.41 RAL-409_95b 240 chr3R 4984139 4984244 roo 6 9063 11 105 '8-3 65.24 4.3 2.1 5` UTR CG14662 - chr3R_11_4980001 chr3R_4980001 0.73 RAL-409_95b 241 chr3R 5765807 5765890 297 6594 391 5 83 '2-3 67.93 5.6 0.8 intron CG2082 - chr3R_5_5765001 chr3R_5765001 0.40 RAL-409_95b 242 chr3R 5934497 5934583 roo 12 404 19 86 '14-5 64.26 3.0 4.8 intron CG34113 - chr3R_19_5930001 chr3R_5930001 0.74 RAL-409_95b 243 chr3R 6426666 6426753 springer 382 12 4 87 '3-1 63.54 3.3 0.9 intron gpp + chr3R_4_6425001 chr3R_6425001 0.75 RAL-409_95b 244 chr3R 7100987 7101085 pogo 2096 4 13 98 '7-6 64.40 4.2 2.5 intron Alh - chr3R_13_7100001 chr3R_7100001 0.54 RAL-409_95b 245 chr3R 7167030 7167103 Tabor 7293 6854 7 73 '3-4 60.47 3.0 1.8 intron sas + chr3R_7_7165001 chr3R_7165001 0.43 RAL-409_95b 246 chr3R 7168120 7168214 opus 7490 15 25 94 '15-10 64.82 6.2 3.5 intron sas + chr3R_25_7165001 chr3R_7165001 0.60 RAL-409_95b 247 chr3R 7284453 7284537 hobo 2932 10 14 84 '3-11 64.65 4.6 2.5 intron rn - chr3R_14_7280001 chr3R_7280001 0.21 RAL-409_95b 248 chr3R 7642546 7642648 blood 365 6 8 102 '5-3 68.75 2.3 2.4 intergenic not near genes chr3R_8_7640001 chr3R_7640001 0.62 RAL-409_95b 249 chr3R 7727665 7727721 transib2 1 2781 6 56 '5-1 71.75 2.6 1.7 intergenic not near genes chr3R_6_7725001 chr3R_7725001 0.83 RAL-409_95b 250 chr3R 7778940 7779049 pogo 2 2098 9 109 '7-2 66.19 2.4 2.6 intergenic not near genes chr3R_9_7775001 chr3R_7775001 0.78 RAL-409_95b 251 chr3R 8389647 8389738 pogo 16 2087 7 91 '3-4 60.08 3.3 1.6 intron CG45263 - chr3R_7_8385001 chr3R_8385001 0.43 RAL-409_95b 252 chr3R 8412919 8412964 F-element 4479 4446 7 45 '3-4 62.46 3.4 1.6 intron CG45263 - chr3R_7_8410001 chr3R_8410001 0.43 RAL-409_95b 253 chr3R 8429419 8429479 hobo 2937 7 6 60 '3-3 63.20 6.4 0.8 intron CG45263 - chr3R_6_8425001 chr3R_8425001 0.50 RAL-409_95b 254 chr3R 8631261 8631342 412 13 485 11 81 '7-4 68.88 7.3 1.3 intergenic not near genes chr3R_11_8630001 chr3R_8630001 0.64 RAL-409_95b 255 chr3R 8758282 8758351 hopper 1398 15 13 69 '8-5 63.89 4.8 2.2 intron,intron CG11768 -,CG34135 - chr3R_13_8755001 chr3R_8755001 0.62 RAL-409_95b 256 chr3R 8812435 8812525 297 6582 6962 17 90 '8-9 72.14 4.2 3.3 intron CG9837 - chr3R_17_8810001 chr3R_8810001 0.47 RAL-409_95b 257 chr3R 8819372 8819460 copia 4869 242 11 88 '8-3 65.79 2.7 3.0 intron CG9821 - chr3R_11_8815001 chr3R_8815001 0.73 RAL-409_95b 258 chr3R 8875796 8875903 roo 15 411 13 107 '7-6 62.76 2.8 3.4 intron pyd - chr3R_13_8875001 chr3R_8875001 0.54 RAL-409_95b 259 chr3R 9236970 9237039 P-element 17 2869 15 69 '8-7 48.06 4.1 2.9 5` UTR pum - chr3R_15_9235001 chr3R_9235001 0.53 RAL-409_95b 260 chr3R 9661162 9661263 mdg3 237 5260 18 101 '7-11 63.27 6.6 2.4 intron CG9492 - chr3R_18_9660001 chr3R_9660001 0.39 RAL-409_95b 261 chr3R 9820415 9820520 17.6 491 4 9 105 '4-5 66.94 3.6 2.0 intergenic CG42857 - chr3R_9_9820001 chr3R_9820001 0.44 RAL-409_95b 262 chr3R 9862506 9862570 mdg1 7054 7432 6 64 '1-5 59.20 2.8 1.6 intron Teh1 - chr3R_6_9860001 chr3R_9860001 0.17 RAL-409_95b 263 chr3R 10219286 10219400 roo 410 8670 15 114 '7-8 64.30 5.1 2.5 intron Syn + chr3R_15_10215001 chr3R_10215001 0.47 RAL-409_95b 264 chr3R 10729107 10729202 Transpac 1 5222 9 95 '4-5 64.11 5.3 1.4 intergenic not near genes chr3R_9_10725001 chr3R_10725001 0.44 RAL-409_95b 265 chr3R 10741083 10741141 1360 1 3360 6 58 '3-3 54.43 3.8 1.2 intron TkR86C - chr3R_6_10740001 chr3R_10740001 0.50 RAL-409_95b 266 chr3R 10990757 10990826 roo 9039 8667 10 69 '5-5 71.44 2.1 3.2 intron CG34114 + chr3R_10_10990001 chr3R_10990001 0.50 RAL-409_95b 267 chr3R 11057024 11057133 roo 8664 400 20 109 '9-11 66.20 4.0 4.0 intergenic not near genes chr3R_20_11055001 chr3R_11055001 0.45 RAL-409_95b 268 chr3R 11144970 11145076 copia 259 4868 16 106 '7-9 74.50 2.9 4.1 exon CheA86a - chr3R_16_11140001 chr3R_11140001 0.44 RAL-409_95b 269 chr3R 11163018 11163111 mdg1 7446 14 7 93 '5-2 63.17 4.3 1.3 exon CG4757 + chr3R_7_11160001 chr3R_11160001 0.71 RAL-409_95b 270 chr3R 11911234 11911329 S-element 1690 1714 8 95 '2-6 64.95 2.9 2.1 intron Cad87A - chr3R_8_11910001 chr3R_11910001 0.25 RAL-409_95b 271 chr3R 12047408 12047483 Stalker2 382 7254 16 75 '8-8 55.73 4.1 3.1 intergenic not near genes chr3R_16_12045001 chr3R_12045001 0.50 RAL-409_95b 272 chr3R 12059239 12059314 roo 8679 406 8 75 '6-2 68.41 3.3 1.9 intergenic not near genes chr3R_8_12055001 chr3R_12055001 0.75 RAL-409_95b 273 chr3R 12221769 12221858 1360 9 4 18 89 '7-11 67.35 3.6 3.9 intergenic CG4860 - chr3R_18_12220001 chr3R_12220001 0.39 RAL-409_95b 274 chr3R 12365590 12365690 blood 7020 374 24 100 '15-9 62.46 1.7 8.9 5` UTR GstD10 - chr3R_24_12365001 chr3R_12365001 0.62 RAL-409_95b 275 chr3R 12548289 12548375 hobo 2927 19 15 86 '6-9 64.70 2.8 3.9 intergenic Octbeta3R - chr3R_15_12545001 chr3R_12545001 0.40 RAL-409_95b 276 chr3R 12599450 12599479 jockey 35 14 6 29 '4-2 63.78 1.8 2.1 intergenic not near genes chr3R_6_12595001 chr3R_12595001 0.67 RAL-409_95b 277 chr3R 12719969 12720031 P-element 2882 2886 9 62 '7-2 45.23 3.8 1.9 exon Men - chr3R_9_12715001 chr3R_12715001 0.78 RAL-409_95b 278 chr3R 13349500 13349590 Ivk 5361 6 12 90 '3-9 63.40 1.0 6.0 intergenic not near genes chr3R_12_13345001 chr3R_13345001 0.25 RAL-409_95b 279 chr3R 13437169 13437254 hopper 2 2 5 85 '4-1 68.25 3.7 1.1 intergenic not near genes chr3R_5_13435001 chr3R_13435001 0.80 RAL-409_95b 280 chr3R 13627481 13627513 F-element 11 8 5 32 '2-3 67.33 2.1 1.6 intergenic not near genes chr3R_5_13625001 chr3R_13625001 0.40 RAL-409_95b 281 chr3R 13794716 13794769 P-element 18 2862 11 53 '3-8 36.28 5.2 1.8 intergenic not near genes chr3R_11_13790001 chr3R_13790001 0.27 RAL-409_95b 282 chr3R 14858463 14858533 hopper 7 20 10 70 '5-5 62.03 3.5 2.2 intron btsz - chr3R_10_14855001 chr3R_14855001 0.50 RAL-409_95b 283 chr3R 15024958 15025037 hopper 5 22 10 79 '6-4 62.93 2.2 3.1 intergenic not near genes chr3R_10_15020001 chr3R_15020001 0.60 RAL-409_95b 284 chr3R 15455320 15455389 roo 10 398 12 69 '4-8 67.19 5.6 1.8 intron AdamTS-A - chr3R_12_15455001 chr3R_15455001 0.33 RAL-409_95b 285 chr3R 15825223 15825309 opus 7113 7487 11 86 '7-4 65.53 3.0 2.8 intron rec - chr3R_11_15825001 chr3R_15825001 0.64 RAL-409_95b 286 chr3R 15858223 15858295 roo 9038 8669 7 72 '3-4 68.28 3.2 1.7 3` UTR CG31183 - chr3R_7_15855001 chr3R_15855001 0.43 RAL-409_95b 287 chr3R 15944099 15944193 Stalker2 7254 7649 18 94 '11-7 63.64 3.1 4.4 intron Sap47 + chr3R_18_15940001 chr3R_15940001 0.61 RAL-409_95b 288 chr3R 16004180 16004249 hobo 1 2935 7 69 '3-4 66.84 2.3 2.1 intergenic srp +,CR42839 - chr3R_7_16000001 chr3R_16000001 0.43 RAL-409_95b 289 chr3R 16103472 16103524 P-element 49 2886 7 52 '3-4 54.89 3.5 1.6 3` UTR Akt1 + chr3R_7_16100001 chr3R_16100001 0.43 RAL-409_95b 290 chr3R 16176284 16176397 roo 407 8662 15 113 '4-11 69.54 5.9 2.2 intron CG8925 + chr3R_15_16175001 chr3R_16175001 0.27 RAL-409_95b 291 chr3R 16673094 16673149 Tirant 385 8128 5 55 '4-1 67.70 2.9 1.3 intron Ubx - chr3R_5_16670001 chr3R_16670001 0.80 RAL-409_95b 292 chr3R 17024804 17024891 mdg1 7056 411 6 87 '1-5 61.11 4.1 1.2 intron Pxd + chr3R_6_17020001 chr3R_17020001 0.17 RAL-409_95b 293 chr3R 17077606 17077640 F-element 23 52 6 34 '3-3 62.14 9.7 0.6 intron Keap1 - chr3R_6_17075001 chr3R_17075001 0.50 RAL-409_95b 294 chr3R 17116288 17116394 297 6587 6972 15 106 '9-6 66.89 5.9 2.2 intron cher - chr3R_15_17115001 chr3R_17115001 0.60 RAL-409_95b 295 chr3R 17271961 17272034 hopper 6 9 7 73 '4-3 66.02 1.8 2.5 intergenic not near genes chr3R_7_17270001 chr3R_17270001 0.57 RAL-409_95b 296 chr3R 17353746 17353823 copia 4886 255 5 77 '2-3 60.59 0.0 5.0 intron beat-IIa - chr3R_5_17350001 chr3R_17350001 0.40 RAL-409_95b 297 chr3R 17523276 17523363 flea 231 4755 9 87 '3-6 63.30 1.0 4.5 intergenic not near genes chr3R_9_17520001 chr3R_17520001 0.33 RAL-409_95b 298 chr3R 17726111 17726183 roo 399 8955 16 72 '11-5 64.22 3.6 3.5 intron Lgr1 + chr3R_16_17725001 chr3R_17725001 0.69 RAL-409_95b 299 chr3R 17768504 17768599 297 6972 2 6 95 '3-3 67.59 2.1 1.9 3` UTR CG43102 - chr3R_6_17765001 chr3R_17765001 0.50 RAL-409_95b 300 chr3R 17840059 17840106 blood 7043 7011 11 47 '7-4 65.50 3.5 2.4 intron tinc + chr3R_11_17840001 chr3R_17840001 0.64 RAL-409_95b 301 chr3R 17968794 17968856 blood 363 7027 12 62 '4-8 57.20 4.7 2.1 intron cpo + chr3R_12_17965001 chr3R_17965001 0.33 RAL-409_95b 302 chr3R 18452890 18452969 hobo 2710 15 8 79 '6-2 63.90 2.2 2.5 intron fru - chr3R_8_18450001 chr3R_18450001 0.75 RAL-409_95b 303 chr3R 18637439 18637525 copia 4868 242 6 86 '3-3 69.92 1.6 2.3 intron,intron qin +,CG14301 - chr3R_6_18635001 chr3R_18635001 0.50 RAL-409_95b 304 chr3R 18807322 18807425 roo 9052 6 7 103 '3-4 59.69 1.8 2.5 intron CG18208 - chr3R_7_18805001 chr3R_18805001 0.43 RAL-409_95b 305 chr3R 18823971 18824083 roo 8661 409 4 112 '1-3 62.08 2.1 1.3 intron CG18208 - chr3R_4_18820001 chr3R_18820001 0.25 RAL-409_95b 306 chr3R 18843789 18843866 roo 398 3 11 77 '6-5 63.93 2.5 3.1 intron CG18208 - chr3R_11_18840001 chr3R_18840001 0.55 RAL-409_95b 307 chr3R 18850992 18851055 17.6 6952 7412 5 63 '4-1 67.03 2.2 1.6 3` UTR CR45633 - chr3R_5_18850001 chr3R_18850001 0.80 RAL-409_95b 308 chr3R 19144405 19144451 Juan 5 4199 5 46 '2-3 57.67 1.7 1.9 intron Ppcs - chr3R_5_19140001 chr3R_19140001 0.40 RAL-409_95b 309 chr3R 19183484 19183567 mdg3 5253 246 10 83 '4-6 59.99 5.6 1.5 intron CG31475 + chr3R_10_19180001 chr3R_19180001 0.40 RAL-409_95b 310 chr3R 19198962 19199058 Tabor 486 6847 14 96 '8-6 59.85 5.1 2.3 intron CG31475 + chr3R_14_19195001 chr3R_19195001 0.57 RAL-409_95b 311 chr3R 19242805 19242850 F-element 416 458 8 45 '4-4 62.48 5.3 1.3 exon unc79 - chr3R_8_19240001 chr3R_19240001 0.50 RAL-409_95b 312 chr3R 19393185 19393228 mdg1 7438 48 7 43 '4-3 68.10 1.4 2.9 intron Ino80 - chr3R_7_19390001 chr3R_19390001 0.57 RAL-409_95b 313 chr3R 19511895 19511957 hobo 15 2925 6 62 '5-1 60.82 4.2 1.2 intron Dys + chr3R_6_19510001 chr3R_19510001 0.83 RAL-409_95b 314 chr3R 19980321 19980413 copia 253 25 11 92 '5-6 66.89 3.0 2.8 intron Hs6st - chr3R_11_19980001 chr3R_19980001 0.45 RAL-409_95b 315 chr3R 19987760 19987857 roo 8666 404 16 97 '11-5 64.95 2.1 5.2 intron Hs6st - chr3R_16_19985001 chr3R_19985001 0.69 RAL-409_95b 316 chr3R 20239608 20239702 flea 233 4758 8 94 '3-5 66.39 3.4 1.8 intron Nlg4 + chr3R_8_20235001 chr3R_20235001 0.38 RAL-409_95b 317 chr3R 20607666 20607768 copia 247 4873 4 102 '2-2 64.19 1.5 1.6 exon bon + chr3R_4_20605001 chr3R_20605001 0.50 RAL-409_95b 318 chr3R 21033460 21033557 412 7070 7539 16 97 '11-5 65.06 4.3 3.0 exon Dhc93AB - chr3R_16_21030001 chr3R_21030001 0.69 RAL-409_95b 319 chr3R 21092885 21092983 mdg1 418 4 11 98 '7-4 62.66 3.5 2.4 intron,intron RhoGAP93B -,CR44178 + chr3R_11_21090001 chr3R_21090001 0.64 RAL-409_95b 320 chr3R 21271170 21271288 pogo 2100 4 18 118 '6-12 68.83 4.7 3.2 3` UTR,3` UTR CG5919 +,CG3308 - chr3R_18_21270001 chr3R_21270001 0.33 RAL-409_95b 321 chr3R 21282976 21283059 blood 2 363 18 83 '12-6 65.05 4.1 3.5 intron SIFaR - chr3R_18_21280001 chr3R_21280001 0.67 RAL-409_95b 322 chr3R 21318111 21318136 Tirant 382 388 5 25 '2-3 65.42 1.6 1.9 intergenic CG16791 -,Hsromega + chr3R_5_21315001 chr3R_21315001 0.40 RAL-409_95b 323 chr3R 21689557 21689646 roo 3 9059 14 89 '9-5 61.84 3.9 2.9 intron CG31176 - chr3R_14_21685001 chr3R_21685001 0.64 RAL-409_95b 324 chr3R 21844037 21844116 copia 6 257 11 79 '6-5 64.87 4.5 2.0 exon Gr93c - chr3R_11_21840001 chr3R_21840001 0.55 RAL-409_95b 325 chr3R 21942061 21942090 opus 484 494 6 29 '5-1 65.59 1.1 2.9 intergenic not near genes chr3R_6_21940001 chr3R_21940001 0.83 RAL-409_95b 326 chr3R 22086223 22086292 hobo 2920 6 12 69 '3-9 65.53 10.1 1.1 intron CG5778 - chr3R_12_22085001 chr3R_22085001 0.25 RAL-409_95b 327 chr3R 22753226 22753302 copia 251 4881 11 76 '4-7 59.09 4.0 2.2 intron,intron CG7029 +,Usp12-46 + chr3R_11_22750001 chr3R_22750001 0.36 RAL-409_95b 328 chr3R 23165055 23165107 BS 5071 7 8 52 '4-4 63.07 2.8 2.1 intergenic not near genes chr3R_8_23165001 chr3R_23165001 0.50 RAL-409_95b 329 chr3R 23223581 23223667 blood 7388 7014 12 86 '6-6 64.74 4.4 2.2 intron cnc - chr3R_12_23220001 chr3R_23220001 0.50 RAL-409_95b 330 chr3R 23385278 23385374 pogo 2092 13 15 96 '5-10 62.55 2.2 4.7 intergenic not near genes chr3R_15_23385001 chr3R_23385001 0.33 RAL-409_95b 331 chr3R 23402190 23402285 copia 5 257 14 95 '10-4 70.63 1.8 5.0 intergenic CG17380 - chr3R_14_23400001 chr3R_23400001 0.71 RAL-409_95b 332 chr3R 23617117 23617222 roo 404 8674 24 105 '10-14 65.03 5.3 3.8 intron CG31145 - chr3R_24_23615001 chr3R_23615001 0.42 RAL-409_95b 333 chr3R 23724077 23724183 Transpac 310 4934 10 106 '4-6 67.49 4.9 1.7 intron CG10365 + chr3R_10_23720001 chr3R_23720001 0.40 RAL-409_95b 334 chr3R 23859151 23859234 roo 410 8662 10 83 '5-5 63.00 2.5 2.9 intergenic not near genes chr3R_10_23855001 chr3R_23855001 0.50 RAL-409_95b 335 chr3R 23859717 23859752 jockey 4565 4579 10 35 '5-5 58.34 5.2 1.6 intergenic Pli - chr3R_10_23855001 chr3R_23855001 0.50 RAL-409_95b 336 chr3R 24002625 24002676 roo 9046 407 8 51 '5-3 67.42 3.9 1.6 intron KrT95D - chr3R_8_24000001 chr3R_24000001 0.62 RAL-409_95b 337 chr3R 24073813 24073860 Stalker4 16 387 5 47 '2-3 60.89 2.4 1.5 intron 4EHP - chr3R_5_24070001 chr3R_24070001 0.40 RAL-409_95b 338 chr3R 24811628 24811687 FB 3 15 8 59 '4-4 60.51 3.9 1.6 intron CG5807 - chr3R_8_24810001 chr3R_24810001 0.50 RAL-409_95b 339 chr3R 25137975 25138024 P-element 2873 24 14 49 '10-4 41.82 2.4 4.1 intergenic danr + chr3R_14_25135001 chr3R_25135001 0.71 RAL-409_95b 340 chr3R 25899402 25899489 HMS-Beagle 6814 248 19 87 '6-13 65.08 4.0 3.8 exon MCO3 + chr3R_19_25895001 chr3R_25895001 0.32 RAL-409_95b 341 chr3R 26246438 26246491 hobo 2937 18 7 53 '1-6 61.03 4.8 1.2 intron CR42745 + chr3R_7_26245001 chr3R_26245001 0.14 RAL-409_95b 342 chr3R 26309101 26309187 hobo 5 2928 19 86 '9-10 65.64 4.2 3.7 intergenic not near genes chr3R_19_26305001 chr3R_26305001 0.47 RAL-409_95b 343 chr3R 26665558 26665632 Tirant 8116 8118 5 74 '3-2 63.64 2.5 1.4 intron beat-VII - chr3R_5_26665001 chr3R_26665001 0.60 RAL-409_95b 344 chr3R 26770836 26770922 I-element 3 5340 13 86 '10-3 59.80 4.5 2.4 intergenic not near genes chr3R_13_26770001 chr3R_26770001 0.77 RAL-409_95b 345 chr3R 26776873 26776983 roo 409 8660 12 110 '6-6 69.09 0.7 7.1 intergenic not near genes chr3R_12_26775001 chr3R_26775001 0.50 RAL-409_95b 346 chr3R 26828772 26828813 Burdock 6164 6146 7 41 '5-2 69.64 2.4 2.1 intron Tl + chr3R_7_26825001 chr3R_26825001 0.71 RAL-409_95b 347 chr3R 26917656 26917709 FB 21 3 7 53 '4-3 65.05 2.2 2.2 intron sda + chr3R_7_26915001 chr3R_26915001 0.57 RAL-409_95b 348 chr3R 26935390 26935494 gypsy5 409 6939 14 104 '7-7 63.44 4.5 2.5 intron sda + chr3R_14_26935001 chr3R_26935001 0.50 RAL-409_95b 349 chr3R 26968387 26968451 FB 9 23 8 64 '5-3 62.68 2.0 2.7 intron CG5521 + chr3R_8_26965001 chr3R_26965001 0.62 RAL-409_95b 350 chr3R 27023405 27023510 roo 399 1 19 105 '10-9 63.91 3.4 4.3 intron RYa-R + chr3R_19_27020001 chr3R_27020001 0.53 RAL-409_95b 351 chr3R 27330736 27330854 roo 8662 405 20 118 '12-8 68.35 3.8 4.2 5` UTR CG3330 - chr3R_20_27330001 chr3R_27330001 0.60 RAL-409_95b 352 chr3R 27474309 27474392 copia 241 23 4 83 '2-2 64.86 2.9 1.0 intergenic not near genes chr3R_4_27470001 chr3R_27470001 0.50 RAL-409_95b 353 chr3R 27668165 27668235 copia 245 6 11 70 '2-9 63.45 2.9 2.8 intron unc80 + chr3R_11_27665001 chr3R_27665001 0.18 RAL-409_95b 354 chr3R 27736368 27736464 blood 362 7020 18 96 '9-9 61.49 4.9 3.1 intergenic Ets98B + chr3R_18_27735001 chr3R_27735001 0.50 RAL-409_95b 355 chr3R 27896918 27897017 pogo 13 2099 12 99 '9-3 58.34 3.6 2.6 intron CG34353 - chr3R_12_27895001 chr3R_27895001 0.75 RAL-409_95b 356 chr3R 28036200 28036228 F-element 37 27 6 28 '4-2 59.35 1.9 2.1 intron CG34362 + chr3R_6_28035001 chr3R_28035001 0.67 RAL-409_95b 357 chr3R 28274847 28274931 copia 4869 253 8 84 '5-3 67.72 2.3 2.4 intergenic not near genes chr3R_8_28270001 chr3R_28270001 0.62 RAL-409_95b 358 chr3R 28684874 28684977 roo 402 4 23 103 '14-9 66.24 3.6 5.0 intron CG9990 + chr3R_23_28680001 chr3R_28680001 0.61 RAL-409_95b 359 chr3R 29290361 29290445 I-element 5348 5276 11 84 '2-9 61.35 4.8 1.9 intergenic not near genes chr3R_11_29290001 chr3R_29290001 0.18 RAL-409_95b 360 chr3R 29388966 29389073 McClintock 472 5958 4 107 '1-3 68.25 1.3 1.7 intron Ptp99A + chr3R_4_29385001 chr3R_29385001 0.25 RAL-409_95b 361 chr3R 29659198 29659303 hobo 2937 9 7 105 '1-6 56.06 2.8 1.8 5` UTR Dop1R2 - chr3R_7_29655001 chr3R_29655001 0.14 RAL-409_95b 362 chr3R 29952686 29952784 invader4 11 324 14 98 '7-7 62.63 3.6 3.0 intron TkR99D - chr3R_14_29950001 chr3R_29950001 0.50 RAL-409_95b 363 chr3R 30374852 30374949 flea 4756 246 13 97 '10-3 64.37 4.1 2.5 intergenic not near genes chr3R_13_30370001 chr3R_30370001 0.77 RAL-409_95b 364 chr3R 30508696 30508734 I-element 5345 5331 4 38 '1-3 64.23 4.7 0.7 exon CG34041 + chr3R_4_30505001 chr3R_30505001 0.25 RAL-409_95b 365 chr3R 30571639 30571748 Burdock 250 6139 8 109 '5-3 65.94 4.0 1.6 intron tmod + chr3R_8_30570001 chr3R_30570001 0.62 RAL-409_95b 366 chr3R 30700708 30700792 copia 4873 224 5 84 '4-1 56.38 3.4 1.1 intergenic not near genes chr3R_5_30700001 chr3R_30700001 0.80 RAL-409_95b 367 chr3R 30771986 30772034 pogo 31 4 4 48 '1-3 72.30 2.4 1.2 intron zfh1 + chr3R_4_30770001 chr3R_30770001 0.25 RAL-409_95b 368 chr3R 30958467 30958540 Max-element 159 272 4 73 '1-3 61.75 2.4 1.2 intergenic not near genes chr3R_4_30955001 chr3R_30955001 0.25 RAL-409_95b 369 chr3R 31101391 31101464 hobo 2923 6 18 73 '6-12 62.01 2.2 5.6 intergenic CG15553 - chr3R_18_31100001 chr3R_31100001 0.33 RAL-409_95b 370 chr3R 31196662 31196734 jockey 4983 19 10 72 '3-7 57.02 2.6 2.8 intergenic CG1544 + chr3R_10_31195001 chr3R_31195001 0.30 RAL-409_95b 371 chr3R 31883757 31883783 jockey 4695 4684 5 26 '2-3 57.89 3.9 1.0 intron heph - chr3R_5_31880001 chr3R_31880001 0.40 RAL-409_95b 372 chr3R 31992718 31992770 roo 8683 407 6 52 '3-3 69.48 0.0 6.0 intron heph - chr3R_6_31990001 chr3R_31990001 0.50 RAL-409_95b 373 chr4 1038442 1038524 pogo 2082 7 6 82 '3-3 60.91 2.4 1.8 exon CaMKII - chr4_6_1035001 chr4_1035001 0.50 RAL-409_95b 374 chr4 1220850 1220944 opus 7500 10 10 94 '8-2 65.23 1.9 3.4 intron Mitf + chr4_10_1220001 chr4_1220001 0.80 RAL-409_95b 375 chrX 280721 280757 I-element 55 5 7 36 '6-1 64.17 2.9 1.8 intron CG3777 + chrX_7_280001 chrX_280001 0.86 RAL-409_95b 376 chrX 1056589 1056697 roo 8665 410 8 108 '4-4 64.65 3.0 2.0 intron CR44779 + chrX_8_1055001 chrX_1055001 0.50 RAL-409_95b 377 chrX 1156380 1156479 Transpac 4920 304 12 99 '5-7 66.04 3.0 3.0 intergenic not near genes chrX_12_1155001 chrX_1155001 0.42 RAL-409_95b 378 chrX 1415388 1415432 P-element 1 30 10 44 '4-6 52.61 7.4 1.2 intron futsch + chrX_10_1415001 chrX_1415001 0.40 RAL-409_95b 379 chrX 1523435 1523486 jockey 4998 4693 8 51 '3-5 60.78 1.3 3.5 intergenic not near genes chrX_8_1520001 chrX_1520001 0.38 RAL-409_95b 380 chrX 1533665 1533777 mdg1 7041 7453 9 112 '1-8 66.40 1.8 3.2 intergenic not near genes chrX_9_1530001 chrX_1530001 0.11 RAL-409_95b 381 chrX 2330193 2330309 roo 407 8662 14 116 '3-11 65.80 3.8 2.9 intron,5` UTR phl +,CR33218 + chrX_14_2330001 chrX_2330001 0.21 RAL-409_95b 382 chrX 3232603 3232702 flea 5012 4761 6 99 '1-5 67.94 2.3 1.8 intron dnc + chrX_6_3230001 chrX_3230001 0.17 RAL-409_95b 383 chrX 3263761 3263844 roo 394 4 18 83 '11-7 61.21 2.3 5.5 intron dnc + chrX_18_3260001 chrX_3260001 0.61 RAL-409_95b 384 chrX 3743195 3743290 1360 7 12 12 95 '4-8 59.78 4.2 2.3 intron tlk + chrX_12_3740001 chrX_3740001 0.33 RAL-409_95b 385 chrX 3917037 3917132 roo 2 406 14 95 '8-6 70.31 3.1 3.4 intron CG42541 - chrX_14_3915001 chrX_3915001 0.57 RAL-409_95b 386 chrX 4006494 4006560 hopper 1388 3 5 66 '2-3 65.32 4.7 0.9 intergenic not near genes chrX_5_4005001 chrX_4005001 0.40 RAL-409_95b 387 chrX 4353154 4353259 hopper 1409 9 6 105 '3-3 59.34 4.0 1.2 intron norpA + chrX_6_4350001 chrX_4350001 0.50 RAL-409_95b 388 chrX 4527490 4527585 pogo 2100 9 8 95 '4-4 70.70 2.6 2.2 intron CR32773 - chrX_8_4525001 chrX_4525001 0.50 RAL-409_95b 389 chrX 4684576 4684623 P-element 27 2869 4 47 '2-2 35.77 4.9 0.7 intron Pp2C1 - chrX_4_4680001 chrX_4680001 0.50 RAL-409_95b 390 chrX 5452569 5452655 3S18 13 6090 6 86 '2-4 63.05 2.3 1.8 intron SPR + chrX_6_5450001 chrX_5450001 0.33 RAL-409_95b 391 chrX 5957762 5957836 roo 8662 393 9 74 '4-5 64.97 3.5 2.0 exon CG6067 + chrX_9_5955001 chrX_5955001 0.44 RAL-409_95b 392 chrX 6041216 6041251 jockey 57 6 8 35 '6-2 66.25 3.3 1.9 intron CG5937 + chrX_8_6040001 chrX_6040001 0.75 RAL-409_95b 393 chrX 6380091 6380193 blood 360 7013 10 102 '2-8 61.62 1.7 3.7 intergenic not near genes chrX_10_6380001 chrX_6380001 0.20 RAL-409_95b 394 chrX 6415468 6415520 roo 411 9039 8 52 '3-5 72.65 4.8 1.4 intergenic not near genes chrX_8_6415001 chrX_6415001 0.38 RAL-409_95b 395 chrX 6470614 6470718 roo 408 2 14 104 '7-7 67.37 2.2 4.4 intron CG42340 - chrX_14_6470001 chrX_6470001 0.50 RAL-409_95b 396 chrX 7441220 7441289 roo 9054 12 9 69 '4-5 65.04 2.5 2.6 intergenic not near genes chrX_9_7440001 chrX_7440001 0.44 RAL-409_95b 397 chrX 7784043 7784071 jockey 4781 4772 8 28 '5-3 60.30 2.6 2.2 intergenic not near genes chrX_8_7780001 chrX_7780001 0.62 RAL-409_95b 398 chrX 7992719 7992803 412 475 7071 9 84 '7-2 60.39 1.8 3.2 intergenic not near genes chrX_9_7990001 chrX_7990001 0.78 RAL-409_95b 399 chrX 8008676 8008755 hobo 26 2708 5 79 '3-2 67.45 1.1 2.4 intron Tbh + chrX_5_8005001 chrX_8005001 0.60 RAL-409_95b 400 chrX 8389591 8389687 HMS-Beagle 7037 6797 4 96 '3-1 67.41 5.4 0.6 intergenic CG1387 + chrX_4_8385001 chrX_8385001 0.75 RAL-409_95b 401 chrX 9428807 9428886 hopper 1413 1413 5 79 '4-1 67.86 3.5 1.1 intron mgl - chrX_5_9425001 chrX_9425001 0.80 RAL-409_95b 402 chrX 9519462 9519542 copia 4870 238 4 80 '2-2 71.86 1.7 1.5 intron CG32700 - chrX_4_9515001 chrX_9515001 0.50 RAL-409_95b 403 chrX 9544998 9545063 hobo 19 2926 7 65 '4-3 62.64 3.0 1.8 intron CG32700 - chrX_7_9540001 chrX_9540001 0.57 RAL-409_95b 404 chrX 9545634 9545727 pogo 2084 1 5 93 '2-3 64.74 4.8 0.9 intron CG32700 - chrX_5_9545001 chrX_9545001 0.40 RAL-409_95b 405 chrX 9648732 9648843 roo 8672 407 16 111 '8-8 66.96 4.4 3.0 intron l(1)G0232 - chrX_16_9645001 chrX_9645001 0.50 RAL-409_95b 406 chrX 9816067 9816097 jockey 4675 4681 4 30 '2-2 59.75 4.7 0.7 intron CG32698 + chrX_4_9815001 chrX_9815001 0.50 RAL-409_95b 407 chrX 9828602 9828627 Bari1 1704 1674 10 25 '4-6 63.33 5.9 1.4 intron CG32698 + chrX_10_9825001 chrX_9825001 0.40 RAL-409_95b 408 chrX 10119555 10119628 FB 18 26 4 73 '3-1 54.40 2.8 1.1 intron,intron RhoU +,CR44894 - chrX_4_10115001 chrX_10115001 0.75 RAL-409_95b 409 chrX 10599644 10599731 roo 403 13 10 87 '6-4 66.21 5.2 1.6 intron CG1628 - chrX_10_10595001 chrX_10595001 0.60 RAL-409_95b 410 chrX 10757710 10757751 hobo 10 2938 5 41 '2-3 65.26 4.5 0.9 intergenic Rph - chrX_5_10755001 chrX_10755001 0.40 RAL-409_95b 411 chrX 11452134 11452172 jockey 4783 4766 6 38 '5-1 64.77 3.1 1.5 intron Evi5 - chrX_6_11450001 chrX_11450001 0.83 RAL-409_95b 412 chrX 11999389 11999491 297 383 6590 7 102 '5-2 66.35 3.2 1.7 intron fw - chrX_7_11995001 chrX_11995001 0.71 RAL-409_95b 413 chrX 12083983 12084015 jockey 29 12 6 32 '4-2 62.35 0.7 3.5 intron,intron CR43960 +,Ten-a + chrX_6_12080001 chrX_12080001 0.67 RAL-409_95b 414 chrX 12312953 12313032 412 469 18 7 79 '4-3 61.20 3.4 1.6 intron Ten-a + chrX_7_12310001 chrX_12310001 0.57 RAL-409_95b 415 chrX 12321762 12321847 Transpac 284 1 12 85 '9-3 69.64 2.8 3.2 intron Ten-a + chrX_12_12320001 chrX_12320001 0.75 RAL-409_95b 416 chrX 12662272 12662344 P-element 2875 1 6 72 '3-3 50.38 6.4 0.8 intron Tis11 + chrX_6_12660001 chrX_12660001 0.50 RAL-409_95b 417 chrX 13389718 13389786 copia 239 3 6 68 '3-3 65.74 0.8 3.3 intergenic CG1662 + chrX_6_13385001 chrX_13385001 0.50 RAL-409_95b 418 chrX 13545302 13545377 412 19 7537 8 75 '3-5 66.91 1.0 4.0 intergenic Cpr12A + chrX_8_13545001 chrX_13545001 0.38 RAL-409_95b 419 chrX 14922074 14922105 jockey 4957 4975 5 31 '2-3 61.63 4.2 1.0 intron,intron Flo2 +,CG9503 - chrX_5_14920001 chrX_14920001 0.40 RAL-409_95b 420 chrX 15012495 15012567 mdg3 233 5253 5 72 '2-3 42.87 2.0 1.7 exon hiw - chrX_5_15010001 chrX_15010001 0.40 RAL-409_95b 421 chrX 15024961 15025067 Burdock 6390 6135 11 106 '6-5 66.62 4.9 1.9 intron,intron hiw -,be + chrX_11_15020001 chrX_15020001 0.55 RAL-409_95b 422 chrX 15241499 15241593 412 484 3 9 94 '6-3 65.80 3.2 2.1 intergenic not near genes chrX_9_15240001 chrX_15240001 0.67 RAL-409_95b 423 chrX 15426236 15426329 flea 4757 233 8 93 '5-3 68.23 1.0 4.0 intron Cngl - chrX_8_15425001 chrX_15425001 0.62 RAL-409_95b 424 chrX 16157972 16158013 pogo 3 26 5 41 '2-3 64.24 2.7 1.4 intergenic not near genes chrX_5_16155001 chrX_16155001 0.40 RAL-409_95b 425 chrX 16839036 16839112 jockey 4668 4982 6 76 '3-3 57.90 1.2 2.7 3` UTR RSG7 - chrX_6_16835001 chrX_16835001 0.50 RAL-409_95b 426 chrX 17101301 17101378 pogo 2095 18 13 77 '8-5 67.55 2.5 3.7 intron CG4991 + chrX_13_17100001 chrX_17100001 0.62 RAL-409_95b 427 chrX 17441323 17441410 hobo 2929 8 12 87 '5-7 61.98 2.8 3.2 intron CG12994 - chrX_12_17440001 chrX_17440001 0.42 RAL-409_95b 428 chrX 17546383 17546428 I-element 5323 21 7 45 '2-5 62.18 1.4 2.9 intron CG43658 - chrX_7_17545001 chrX_17545001 0.29 RAL-409_95b 429 chrX 17837947 17838065 S-element 4 1 8 118 '1-7 66.16 3.5 1.8 intron CG6398 + chrX_8_17835001 chrX_17835001 0.12 RAL-409_95b 430 chrX 18175170 18175277 opus 7495 9 19 107 '12-7 66.07 4.8 3.3 intergenic Frq1 + chrX_19_18175001 chrX_18175001 0.63 RAL-409_95b 431 chrX 18238755 18238785 jockey 8 33 4 30 '1-3 62.79 0.7 2.4 intergenic not near genes chrX_4_18235001 chrX_18235001 0.25 RAL-409_95b 432 chrX 18358989 18359049 BS 9 5068 8 60 '5-3 56.98 3.7 1.7 exon CG6106 + chrX_8_18355001 chrX_18355001 0.62 RAL-409_95b 433 chrX 18403536 18403596 roo 7 9043 8 60 '5-3 61.78 2.3 2.4 intron CG32549 - chrX_8_18400001 chrX_18400001 0.62 RAL-409_95b 434 chrX 18823840 18823949 springer 5 379 11 109 '8-3 68.34 4.0 2.2 intron CG42450 + chrX_11_18820001 chrX_18820001 0.73 RAL-409_95b 435 chrX 18983139 18983241 Transpac 5228 4920 12 102 '9-3 69.36 4.6 2.1 intron CG43759 + chrX_12_18980001 chrX_18980001 0.75 RAL-409_95b 436 chrX 18991165 18991224 roo 9059 29 9 59 '3-6 69.87 3.7 1.9 intron CG43759 + chrX_9_18990001 chrX_18990001 0.33 RAL-409_95b 437 chrX 19114069 19114174 invader3 5201 5462 8 105 '2-6 57.66 1.3 3.5 intergenic not near genes chrX_8_19110001 chrX_19110001 0.25 RAL-409_95b 438 chrX 20098126 20098173 BS 5052 4994 4 47 '3-1 69.75 1.9 1.4 intergenic not near genes chrX_4_20095001 chrX_20095001 0.75 RAL-409_95b 439 chrX 20330458 20330613 P-element 2881 3 11 155 '6-5 44.33 3.1 2.7 intergenic CG1504 - chrX_11_20330001 chrX_20330001 0.55 RAL-409_95b 440 chrX 20466501 20466601 17.6 6943 486 8 100 '5-3 67.16 2.2 2.5 3` UTR CG32506 + chrX_8_20465001 chrX_20465001 0.62 RAL-409_95b 441 chrX 21053524 21053605 P-element 15 2886 10 81 '7-3 44.42 4.8 1.7 intron CG1518 - chrX_10_21050001 chrX_21050001 0.70 RAL-409_95b 442 chrX 21087574 21087611 mdg3 5265 5276 5 37 '1-4 61.58 0.6 3.1 intergenic not near genes chrX_5_21085001 chrX_21085001 0.20 RAL-409_95b 443 chrX 21182638 21182730 pogo 8 2077 9 92 '4-5 67.35 2.3 2.7 intergenic not near genes chrX_9_21180001 chrX_21180001 0.44 RAL-409_95b 444 chrX 21280988 21281085 P-element 13 7 12 97 '4-8 51.27 3.8 2.5 intron CG32521 - chrX_12_21280001 chrX_21280001 0.33 RAL-409_95b 445 chrX 21399399 21399465 pogo 2 2091 12 66 '11-1 64.92 3.0 3.0 intergenic not near genes chrX_12_21395001 chrX_21395001 0.92 RAL-409_95b 446 chrX 21589436 21589522 1360 3387 3379 9 86 '5-4 64.62 3.8 1.9 intergenic not near genes chrX_9_21585001 chrX_21585001 0.56 RAL-409_95b 447 chrX 21667904 21667933 gypsy2 28 5 5 29 '2-3 69.25 0.4 3.6 intergenic not near genes chrX_5_21665001 chrX_21665001 0.40 RAL-409_95b 448 chrX 22562694 22562800 3S18 4 6095 8 106 '5-3 64.01 2.2 2.5 intergenic not near genes chrX_8_22560001 chrX_22560001 0.62 RAL-409_95b 449 chrX 22677779 22677882 Tirant 399 8109 8 103 '6-2 68.77 5.1 1.3 intron CR44997 + chrX_8_22675001 chrX_22675001 0.75 RAL-409_95b 450 chrX 23064984 23065055 Burdock 2 6356 9 71 '6-3 67.69 4.2 1.7 intergenic not near genes chrX_9_23060001 chrX_23060001 0.67 RAL-409_95b 451 chrY 3648867 3648904 Stalker2 216 7469 8 37 '6-2 60.82 0.3 6.2 intergenic not near genes chrY_8_3645001 chrY_3645001 0.75 RAL-409_95b