SV#	Chr_5p	Chr_coord_5p_start	Chr_coord_5p_end	Chr_3p	Chr_coord_3p_start	Chr_coord_3p_end	repName	Reads_collapsed	avg_del_len	RefGen_3prime	Refgen_5prime	RefGen_Avg	Coverage_Ratio	size	Chr_5p	Chr_coord_5p	classification_5p	comment_5p	Chr_mid	Chr_coord_mid	classification_mid	comment_mid	Chr_3p	Chr_coord_3p	classification_3p	comment_3p	depletion_code	loci_code	libname
1	chr2L	47425	47476	chr2L	52569	52615	jockey	21	5148	6.0	5.5	5.8	3.1	5190	chr2L	47425	intron	Cda5 -	chr2L	50020	intron	Cda5 -	chr2L	52615	intron	Cda5 -	chr2L_21_50001	chr2L_50001	RAL-409_125b
6	chr2L	347846	347894	chr2L	355396	355438	blood	13	7547	6.0	4.0	5.0	2.2	7592	chr2L	347846	3` UTR	Plc21C +	chr2L	351642	intron	Plc21C +	chr2L	355438	3` UTR	Plc21C +	chr2L_13_350001	chr2L_350001	RAL-409_125b
16	chr2L	686913	686939	chr2L	695988	696029	roo	8	9086	5.5	5.0	5.2	1.3	9116	chr2L	686913	intron	ds -	chr2L	691471	intron	ds -	chr2L	696029	intron	ds -	chr2L_8_690001	chr2L_690001	RAL-409_125b
19	chr2L	770434	770482	chr2L	772246	772298	Bari1	18	1820	6.5	4.5	5.5	2.8	1864	chr2L	770434	intergenic	not near genes	chr2L	771366	intergenic	not near genes	chr2L	772298	intergenic	CR44614 +	chr2L_18_770001	chr2L_770001	RAL-409_125b
31	chr2L	976831	976913	chr2L	984517	984580	roo	10	7682	0.5	3.5	2.0	3.3	7749	chr2L	976831	intergenic	not near genes	chr2L	980706	intergenic	not near genes	chr2L	984580	intergenic	not near genes	chr2L_10_980001	chr2L_980001	RAL-409_125b
38	chr2L	1220100	1220157	chr2L	1227600	1227649	blood	12	7511	4.0	2.5	3.2	2.9	7549	chr2L	1220100	intron	CG42329 +	chr2L	1223874	intron	CG42329 +	chr2L	1227649	intron	CG42329 +	chr2L_12_1220001	chr2L_1220001	RAL-409_125b
45	chr2L	1570662	1570715	chr2L	1573561	1573637	F-element	11	2917	6.5	5.0	5.8	1.6	2975	chr2L	1570662	intron	haf +	chr2L	1572150	intron	haf +	chr2L	1573637	intron	haf +	chr2L_11_1570001	chr2L_1570001	RAL-409_125b
50	chr2L	1678931	1679000	chr2L	1686446	1686513	blood	18	7512	5.0	5.5	5.2	2.9	7582	chr2L	1678931	intron	chinmo +	chr2L	1682722	intron	chinmo +	chr2L	1686513	intron	chinmo +	chr2L_18_1680001	chr2L_1680001	RAL-409_125b
51	chr2L	1711313	1711389	chr2L	1711687	1711713	mdg3	14	359	2.5	5.0	3.8	2.9	400	chr2L	1711313	3` UTR,3` UTR	mRpL48 +,frtz -	chr2L	1711513	3` UTR	frtz -	chr2L	1711713	3` UTR	frtz -	chr2L_14_1710001	chr2L_1710001	RAL-409_125b
59	chr2L	2100380	2100397	chr2L	2109554	2109591	roo	4	9191	8.0	8.5	8.2	0.4	9211	chr2L	2100380	intron	dpr3 -	chr2L	2104986	intron	dpr3 -	chr2L	2109591	intron	dpr3 -	chr2L_4_2100001	chr2L_2100001	RAL-409_125b
60	chr2L	2112074	2112141	chr2L	2119774	2119803	opus	5	7679	2.0	6.5	4.2	1.0	7729	chr2L	2112074	intergenic	not near genes	chr2L	2115938	intergenic	not near genes	chr2L	2119803	intergenic	not near genes	chr2L_5_2115001	chr2L_2115001	RAL-409_125b
64	chr2L	2294040	2294070	chr2L	2299250	2299309	copia	11	5225	4.0	2.5	3.2	2.6	5269	chr2L	2294040	intergenic	not near genes	chr2L	2296674	intergenic	not near genes	chr2L	2299309	intergenic	not near genes	chr2L_11_2295001	chr2L_2295001	RAL-409_125b
70	chr2L	2565506	2565547	chr2L	2571629	2571670	297	10	6121	3.5	8.0	5.8	1.5	6164	chr2L	2565506	exon	Cyp309a2 -	chr2L	2568588	intron	Cyp309a2 -	chr2L	2571670	exon	Cyp309a2 -	chr2L_10_2565001	chr2L_2565001	RAL-409_125b
73	chr2L	2661155	2661225	chr2L	2663043	2663064	I-element	11	1861	1.5	6.0	3.8	2.3	1909	chr2L	2661155	intergenic	not near genes	chr2L	2662110	intergenic	not near genes	chr2L	2663064	intergenic	not near genes	chr2L_11_2660001	chr2L_2660001	RAL-409_125b
77	chr2L	2772580	2772622	chr2L	2779209	2779241	297	13	6628	3.5	5.0	4.2	2.5	6661	chr2L	2772580	3` UTR	Syt1 -	chr2L	2775910	intron	Syt1 -	chr2L	2779241	3` UTR	Syt1 -	chr2L_13_2775001	chr2L_2775001	RAL-409_125b
82	chr2L	2933271	2933324	chr2L	2935488	2935540	pogo	7	2221	5.0	6.5	5.8	1.0	2269	chr2L	2933271	intron	lilli +	chr2L	2934406	intron	lilli +	chr2L	2935540	intron	lilli +	chr2L_7_2930001	chr2L_2930001	RAL-409_125b
84	chr2L	3072995	3073057	chr2L	3078248	3078300	copia	10	5250	6.0	6.5	6.2	1.4	5305	chr2L	3072995	intron	toc -	chr2L	3075648	intron	toc -	chr2L	3078300	intron	toc -	chr2L_10_3075001	chr2L_3075001	RAL-409_125b
90	chr2L	3202401	3202449	chr2L	3212065	3212112	mdg1	7	9659	11.0	8.0	9.5	0.7	9711	chr2L	3202401	intergenic	not near genes	chr2L	3207256	intergenic	not near genes	chr2L	3212112	intergenic	not near genes	chr2L_7_3205001	chr2L_3205001	RAL-409_125b
94	chr2L	3251477	3251521	chr2L	3259094	3259113	springer	10	7614	1.0	7.5	4.2	1.9	7636	chr2L	3251477	intergenic	not near genes	chr2L	3255295	intergenic	not near genes	chr2L	3259113	intergenic	not near genes	chr2L_10_3255001	chr2L_3255001	RAL-409_125b
100	chr2L	3388578	3388625	chr2L	3388869	3388903	pogo	12	289	3.0	4.5	3.8	2.5	325	chr2L	3388578	intergenic	CG42460 -	chr2L	3388740	intergenic	CG42460 -	chr2L	3388903	intergenic	CG42460 -,CR44791 +	chr2L_12_3385001	chr2L_3385001	RAL-409_125b
107	chr2L	3649732	3649810	chr2L	3654989	3655050	copia	11	5253	6.0	6.5	6.2	1.5	5318	chr2L	3649732	intron	for -	chr2L	3652391	intron	for -	chr2L	3655050	intron	for -	chr2L_11_3650001	chr2L_3650001	RAL-409_125b
122	chr2L	4066001	4066045	chr2L	4068876	4068919	Juan	10	2871	5.5	7.0	6.2	1.4	2918	chr2L	4066001	intron	ed +	chr2L	4067460	intron	ed +	chr2L	4068919	intron	ed +	chr2L_10_4065001	chr2L_4065001	RAL-409_125b
132	chr2L	4601669	4601721	chr2L	4609154	4609205	mdg1	12	7488	9.5	5.0	7.2	1.5	7536	chr2L	4601669	intron	dp -	chr2L	4605437	intron	dp -	chr2L	4609205	intron	dp -	chr2L_12_4605001	chr2L_4605001	RAL-409_125b
133	chr2L	4661795	4661847	chr2L	4669425	4669476	opus	4	7624	5.0	7.5	6.2	0.6	7681	chr2L	4661795	intergenic	not near genes	chr2L	4665636	intergenic	not near genes	chr2L	4669476	intergenic	not near genes	chr2L_4_4665001	chr2L_4665001	RAL-409_125b
143	chr2L	4918134	4918188	chr2L	4923257	4923311	jockey	21	5121	5.0	3.0	4.0	4.2	5177	chr2L	4918134	intron	hoe1 -	chr2L	4920722	intron	hoe1 -	chr2L	4923311	intron	hoe1 -	chr2L_21_4920001	chr2L_4920001	RAL-409_125b
155	chr2L	5342736	5342803	chr2L	5345164	5345196	Doc	13	2427	3.5	6.5	5.0	2.2	2460	chr2L	5342736	intergenic	not near genes	chr2L	5343966	intergenic	not near genes	chr2L	5345196	intergenic	not near genes	chr2L_13_5340001	chr2L_5340001	RAL-409_125b
171	chr2L	5827683	5827730	chr2L	5836734	5836788	roo	14	9052	6.0	4.0	5.0	2.3	9105	chr2L	5827683	intron	TrissinR +	chr2L	5832236	intron	TrissinR +	chr2L	5836788	intron	TrissinR +	chr2L_14_5830001	chr2L_5830001	RAL-409_125b
185	chr2L	6363107	6363126	chr2L	6366079	6366098	Burdock	5	2972	12.0	4.0	8.0	0.6	2991	chr2L	6363107	intergenic	not near genes	chr2L	6364602	intergenic	not near genes	chr2L	6366098	intergenic	not near genes	chr2L_5_6360001	chr2L_6360001	RAL-409_125b
186	chr2L	6363128	6363181	chr2L	6366070	6366142	Burdock	12	2961	3.5	3.5	3.5	2.7	3014	chr2L	6363128	intergenic	not near genes	chr2L	6364635	intergenic	not near genes	chr2L	6366142	intergenic	not near genes	chr2L_12_6360001	chr2L_6360001	RAL-409_125b
189	chr2L	6426832	6426837	chr2L	6445142	6445147	roo	5	18309	15.5	8.0	11.8	0.4	18315	chr2L	6426832	3` UTR	CG9527 -	chr2L	6435990	intron	CG9527 -	chr2L	6445147	exon	CG9527 -	chr2L_5_6435001	chr2L_6435001	RAL-409_125b
190	chr2L	6426838	6426882	chr2L	6445131	6445181	roo	19	18303	8.5	7.0	7.8	2.2	18343	chr2L	6426838	3` UTR	CG9527 -	chr2L	6436010	intron	CG9527 -	chr2L	6445181	exon	CG9527 -	chr2L_19_6435001	chr2L_6435001	RAL-409_125b
204	chr2L	6876770	6876807	chr2L	6882971	6883015	diver	8	6216	6.0	6.5	6.2	1.1	6245	chr2L	6876770	intron	Nlg2 +	chr2L	6879892	intron	Nlg2 +	chr2L	6883015	intron	Nlg2 +	chr2L_8_6875001	chr2L_6875001	RAL-409_125b
214	chr2L	7343286	7343354	chr2L	7350449	7350497	roo	9	7155	4.0	5.0	4.5	1.6	7211	chr2L	7343286	intron	Wnt6 +	chr2L	7346892	intron	Wnt6 +	chr2L	7350497	intron	Wnt6 +	chr2L_9_7345001	chr2L_7345001	RAL-409_125b
220	chr2L	7579157	7579218	chr2L	7579398	7579425	BS	9	237	2.5	2.5	2.5	2.6	268	chr2L	7579157	intergenic	RapGAP1 -	chr2L	7579291	intergenic	RapGAP1 -	chr2L	7579425	intergenic	RapGAP1 -	chr2L_9_7575001	chr2L_7575001	RAL-409_125b
227	chr2L	7959006	7959069	chr2L	7960467	7960532	pogo	12	1461	1.5	5.0	3.2	2.9	1526	chr2L	7959006	intron	Snoo -	chr2L	7959769	intron	Snoo -	chr2L	7960532	intron	Snoo -	chr2L_12_7955001	chr2L_7955001	RAL-409_125b
228	chr2L	7977041	7977108	chr2L	7984066	7984127	297	9	7015	4.5	2.0	3.2	2.1	7086	chr2L	7977041	intron	Snoo -	chr2L	7980584	intron	Snoo -	chr2L	7984127	intron,5` UTR	Snoo -,CG7231 +	chr2L_9_7980001	chr2L_7980001	RAL-409_125b
231	chr2L	8013596	8013647	chr2L	8023581	8023632	copia	10	9981	5.0	2.0	3.5	2.2	10036	chr2L	8013596	intron	Tg +	chr2L	8018614	intron	Tg +	chr2L	8023632	intron	Tg +	chr2L_10_8015001	chr2L_8015001	RAL-409_125b
241	chr2L	8452148	8452162	chr2L	8461999	8462013	roo	5	9849	16.0	9.0	12.5	0.4	9865	chr2L	8452148	intron	fu12 -	chr2L	8457080	intron	fu12 -	chr2L	8462013	intron	fu12 -	chr2L_5_8455001	chr2L_8455001	RAL-409_125b
242	chr2L	8452177	8452219	chr2L	8461998	8462070	roo	11	9844	10.5	8.0	9.2	1.1	9893	chr2L	8452177	intron	fu12 -	chr2L	8457124	intron	fu12 -	chr2L	8462070	intron	fu12 -	chr2L_11_8455001	chr2L_8455001	RAL-409_125b
248	chr2L	8723101	8723140	chr2L	8731493	8731567	Tirant	7	8420	2.5	3.0	2.8	1.8	8466	chr2L	8723101	intron	raw -	chr2L	8727334	intron	raw -	chr2L	8731567	intron	raw -	chr2L_7_8725001	chr2L_8725001	RAL-409_125b
257	chr2L	9000260	9000291	chr2L	9007815	9007851	roo	10	7558	6.0	10.0	8.0	1.1	7591	chr2L	9000260	intergenic	Try29F +	chr2L	9004056	intergenic	not near genes	chr2L	9007851	intergenic	not near genes	chr2L_10_9000001	chr2L_9000001	RAL-409_125b
281	chr2L	9393467	9393521	chr2L	9396484	9396538	jockey	9	3016	2.5	8.0	5.2	1.5	3071	chr2L	9393467	intron	Shawl -	chr2L	9395002	intron	Shawl -	chr2L	9396538	intron	Shawl -	chr2L_9_9395001	chr2L_9395001	RAL-409_125b
296	chr2L	9973707	9973752	chr2L	9980843	9980918	HMS-Beagle	12	7156	3.5	4.0	3.8	2.5	7211	chr2L	9973707	intergenic	not near genes	chr2L	9977312	intergenic	not near genes	chr2L	9980918	intergenic	not near genes	chr2L_12_9975001	chr2L_9975001	RAL-409_125b
304	chr2L	10156301	10156344	chr2L	10163801	10163844	blood	7	7505	6.5	5.0	5.8	1.0	7543	chr2L	10156301	intron,3` UTR	CG44153 -,CG4839 +	chr2L	10160072	intron	CG44153 -	chr2L	10163844	intron	CG44153 -	chr2L_7_10160001	chr2L_10160001	RAL-409_125b
315	chr2L	10592792	10592868	chr2L	10600503	10600572	opus	16	7708	2.5	1.5	2.0	5.3	7780	chr2L	10592792	intron	Trim9 +	chr2L	10596682	intron	Trim9 +	chr2L	10600572	intron	Trim9 +	chr2L_16_10595001	chr2L_10595001	RAL-409_125b
323	chr2L	10862806	10862871	chr2L	10864466	10864493	Rt1c	8	1646	3.5	5.0	4.2	1.5	1687	chr2L	10862806	3` UTR	CR43807 -	chr2L	10863650	intron	CR43807 -	chr2L	10864493	3` UTR	CR43807 -	chr2L_8_10860001	chr2L_10860001	RAL-409_125b
327	chr2L	10946927	10946939	chr2L	10956177	10956199	roo	5	9256	8.0	8.0	8.0	0.6	9272	chr2L	10946927	intron	dpr2 -	chr2L	10951563	intron	dpr2 -	chr2L	10956199	intron	dpr2 -	chr2L_5_10950001	chr2L_10950001	RAL-409_125b
328	chr2L	10946942	10946977	chr2L	10956170	10956172	roo	10	9244	3.0	8.0	5.5	1.5	9230	chr2L	10946942	intron	dpr2 -	chr2L	10951557	intron	dpr2 -	chr2L	10956172	intron	dpr2 -	chr2L_10_10950001	chr2L_10950001	RAL-409_125b
334	chr2L	11315221	11315270	chr2L	11317675	11317724	G2	13	2449	3.0	5.0	4.0	2.6	2503	chr2L	11315221	intergenic	not near genes	chr2L	11316472	intergenic	not near genes	chr2L	11317724	intergenic	not near genes	chr2L_13_11315001	chr2L_11315001	RAL-409_125b
340	chr2L	11540549	11540608	chr2L	11548001	11548060	Tabor	10	7452	5.5	6.0	5.8	1.5	7511	chr2L	11540549	intergenic	not near genes	chr2L	11544304	intergenic	not near genes	chr2L	11548060	intergenic	not near genes	chr2L_10_11540001	chr2L_11540001	RAL-409_125b
341	chr2L	11563608	11563646	chr2L	11568852	11568900	copia	7	5245	5.5	4.0	4.8	1.2	5292	chr2L	11563608	intergenic	not near genes	chr2L	11566254	intergenic	not near genes	chr2L	11568900	intergenic	not near genes	chr2L_7_11565001	chr2L_11565001	RAL-409_125b
344	chr2L	11614053	11614085	chr2L	11615548	11615570	hopper2	7	1511	3.5	4.5	4.0	1.4	1517	chr2L	11614053	intron	kek2 +	chr2L	11614812	intron	kek2 +	chr2L	11615570	intron	kek2 +	chr2L_7_11610001	chr2L_11610001	RAL-409_125b
347	chr2L	11713487	11713520	chr2L	11720979	11721038	blood	9	7505	8.0	7.5	7.8	1.0	7551	chr2L	11713487	intergenic	not near genes	chr2L	11717262	intergenic	not near genes	chr2L	11721038	intergenic	CR44143 +	chr2L_9_11715001	chr2L_11715001	RAL-409_125b
357	chr2L	12067294	12067349	chr2L	12074396	12074451	297	12	7102	5.0	7.0	6.0	1.7	7157	chr2L	12067294	intergenic	not near genes	chr2L	12070872	intergenic	not near genes	chr2L	12074451	intergenic	not near genes	chr2L_12_12070001	chr2L_12070001	RAL-409_125b
370	chr2L	12558279	12558345	chr2L	12565458	12565518	HMS-Beagle	19	7167	3.5	10.0	6.8	2.4	7239	chr2L	12558279	intergenic	not near genes	chr2L	12561898	intergenic	not near genes	chr2L	12565518	intergenic	not near genes	chr2L_19_12560001	chr2L_12560001	RAL-409_125b
372	chr2L	12728877	12728898	chr2L	12729168	12729191	pogo	6	293	13.0	9.0	11.0	0.5	314	chr2L	12728877	intron	MRP +	chr2L	12729034	intron	MRP +	chr2L	12729191	exon	MRP +	chr2L_6_12725001	chr2L_12725001	RAL-409_125b
373	chr2L	12728913	12728947	chr2L	12729179	12729226	pogo	7	285	7.5	10.0	8.8	0.7	313	chr2L	12728913	intron	MRP +	chr2L	12729070	intron	MRP +	chr2L	12729226	exon	MRP +	chr2L_7_12725001	chr2L_12725001	RAL-409_125b
374	chr2L	12731018	12731081	chr2L	12735835	12735897	F-element	5	4814	4.5	4.0	4.2	1.0	4879	chr2L	12731018	intron	MRP +	chr2L	12733458	intron	MRP +	chr2L	12735897	intron	MRP +	chr2L_5_12730001	chr2L_12730001	RAL-409_125b
375	chr2L	12739131	12739197	chr2L	12743961	12744028	Doc	14	4828	8.5	4.0	6.2	1.9	4897	chr2L	12739131	exon	MRP +	chr2L	12741580	intron	MRP +	chr2L	12744028	exon	MRP +	chr2L_14_12740001	chr2L_12740001	RAL-409_125b
376	chr2L	12763806	12763869	chr2L	12764063	12764131	BS	6	261	0.0	0.0	0.0	6.0	325	chr2L	12763806	intergenic	not near genes	chr2L	12763968	intergenic	not near genes	chr2L	12764131	intergenic	not near genes	chr2L_6_12760001	chr2L_12760001	RAL-409_125b
377	chr2L	12781759	12781783	chr2L	12789251	12789276	Quasimodo	4	7493	12.0	5.5	8.8	0.4	7517	chr2L	12781759	intergenic	not near genes	chr2L	12785518	intergenic	not near genes	chr2L	12789276	intergenic	not near genes	chr2L_4_12785001	chr2L_12785001	RAL-409_125b
378	chr2L	12791580	12791612	chr2L	12795294	12795317	F-element	5	3711	7.0	9.5	8.2	0.5	3737	chr2L	12791580	intergenic	not near genes	chr2L	12793448	intergenic	not near genes	chr2L	12795317	intergenic	not near genes	chr2L_5_12790001	chr2L_12790001	RAL-409_125b
379	chr2L	12791617	12791624	chr2L	12795282	12795341	F-element	4	3700	5.5	7.0	6.2	0.6	3724	chr2L	12791617	intergenic	not near genes	chr2L	12793479	intergenic	not near genes	chr2L	12795341	intergenic	not near genes	chr2L_4_12790001	chr2L_12790001	RAL-409_125b
380	chr2L	12861662	12861729	chr2L	12863164	12863196	hobo	23	1502	1.5	3.5	2.5	6.6	1534	chr2L	12861662	intergenic	not near genes	chr2L	12862429	intergenic	not near genes	chr2L	12863196	intergenic	not near genes	chr2L_23_12860001	chr2L_12860001	RAL-409_125b
381	chr2L	12893982	12894046	chr2L	12895499	12895547	hobo	9	1496	2.0	9.0	5.5	1.4	1565	chr2L	12893982	intergenic	not near genes	chr2L	12894764	intergenic	not near genes	chr2L	12895547	intergenic	not near genes	chr2L_9_12890001	chr2L_12890001	RAL-409_125b
382	chr2L	12933811	12933880	chr2L	12941317	12941386	blood	15	7500	6.0	3.5	4.8	2.6	7575	chr2L	12933811	intergenic	not near genes	chr2L	12937598	intergenic	not near genes	chr2L	12941386	intergenic	not near genes	chr2L_15_12935001	chr2L_12935001	RAL-409_125b
383	chr2L	13036205	13036208	chr2L	13036497	13036497	X-element	4	291	15.0	6.5	10.8	0.3	292	chr2L	13036205	intron	CG9932 -	chr2L	13036351	intron	CG9932 -	chr2L	13036497	intron	CG9932 -	chr2L_4_13035001	chr2L_13035001	RAL-409_125b
384	chr2L	13036219	13036267	chr2L	13036495	13036549	X-element	16	289	8.0	6.5	7.2	2.0	330	chr2L	13036219	intron	CG9932 -	chr2L	13036384	intron	CG9932 -	chr2L	13036549	intron	CG9932 -	chr2L_16_13035001	chr2L_13035001	RAL-409_125b
394	chr2L	13405609	13405658	chr2L	13410445	13410484	Doc	11	4841	9.5	6.5	8.0	1.2	4875	chr2L	13405609	exon	CG7110 +	chr2L	13408046	intron	CG7110 +	chr2L	13410484	intron	CG7110 +	chr2L_11_13405001	chr2L_13405001	RAL-409_125b
396	chr2L	13449444	13449449	chr2L	13456930	13456935	Quasimodo	4	7485	9.0	9.5	9.2	0.4	7491	chr2L	13449444	intron,5` UTR	CG42784 +,Hsp60D -	chr2L	13453190	intron	CG42784 +	chr2L	13456935	intron	CG42784 +	chr2L_4_13450001	chr2L_13450001	RAL-409_125b
397	chr2L	13449452	13449483	chr2L	13456928	13456959	Quasimodo	9	7483	6.0	9.5	7.8	1.0	7507	chr2L	13449452	intron,5` UTR	CG42784 +,Hsp60D -	chr2L	13453206	intron	CG42784 +	chr2L	13456959	intron	CG42784 +	chr2L_9_13450001	chr2L_13450001	RAL-409_125b
398	chr2L	13481415	13481419	chr2L	13482072	13482076	jockey	4	657	10.5	8.0	9.2	0.4	661	chr2L	13481415	intron	CG42784 +	chr2L	13481746	intron	CG42784 +	chr2L	13482076	intron	CG42784 +	chr2L_4_13480001	chr2L_13480001	RAL-409_125b
399	chr2L	13481421	13481455	chr2L	13482069	13482107	jockey	7	650	8.5	7.5	8.0	0.8	686	chr2L	13481421	intron	CG42784 +	chr2L	13481764	intron	CG42784 +	chr2L	13482107	intron	CG42784 +	chr2L_7_13480001	chr2L_13480001	RAL-409_125b
401	chr2L	13522251	13522289	chr2L	13527597	13527604	Transpac	8	5348	1.0	12.0	6.5	1.1	5353	chr2L	13522251	intron	B4 -	chr2L	13524928	intron	B4 -	chr2L	13527604	intron	B4 -	chr2L_8_13520001	chr2L_13520001	RAL-409_125b
402	chr2L	13560383	13560413	chr2L	13565244	13565284	F-element	8	4868	5.5	10.0	7.8	0.9	4901	chr2L	13560383	intron	kuz +	chr2L	13562834	intron	kuz +	chr2L	13565284	intron	kuz +	chr2L_8_13560001	chr2L_13560001	RAL-409_125b
412	chr2L	13761793	13761833	chr2L	13762933	13762984	Doc	9	1155	7.5	5.5	6.5	1.2	1191	chr2L	13761793	intron	TM9SF4 +	chr2L	13762388	intron	TM9SF4 +	chr2L	13762984	intron	TM9SF4 +	chr2L_9_13760001	chr2L_13760001	RAL-409_125b
414	chr2L	13853043	13853095	chr2L	13862243	13862286	roo	8	9196	7.5	7.0	7.2	1.0	9243	chr2L	13853043	intron	CenG1A +	chr2L	13857664	intron	CenG1A +	chr2L	13862286	intron	CenG1A +	chr2L_8_13855001	chr2L_13855001	RAL-409_125b
443	chr2L	14803841	14803905	chr2L	14809087	14809158	copia	15	5250	3.5	4.0	3.8	3.1	5317	chr2L	14803841	intergenic	not near genes	chr2L	14806500	intergenic	not near genes	chr2L	14809158	intergenic	not near genes	chr2L_15_14805001	chr2L_14805001	RAL-409_125b
446	chr2L	14889914	14889981	chr2L	14890379	14890456	jockey	7	472	3.5	4.0	3.8	1.5	542	chr2L	14889914	intergenic	not near genes	chr2L	14890185	intergenic	not near genes	chr2L	14890456	intergenic	not near genes	chr2L_7_14890001	chr2L_14890001	RAL-409_125b
448	chr2L	14984353	14984387	chr2L	14992000	14992039	opus	5	7649	9.0	7.0	8.0	0.6	7686	chr2L	14984353	intron	mol -	chr2L	14988196	intron	mol -	chr2L	14992039	intron	mol -	chr2L_5_14985001	chr2L_14985001	RAL-409_125b
460	chr2L	15446025	15446082	chr2L	15453520	15453574	blood	10	7512	2.0	1.5	1.8	3.6	7549	chr2L	15446025	intergenic	not near genes	chr2L	15449800	intergenic	not near genes	chr2L	15453574	intergenic	not near genes	chr2L_10_15445001	chr2L_15445001	RAL-409_125b
464	chr2L	15586365	15586437	chr2L	15593467	15593530	297	6	7099	6.0	4.5	5.2	1.0	7165	chr2L	15586365	intergenic	not near genes	chr2L	15589948	intergenic	not near genes	chr2L	15593530	intergenic	not near genes	chr2L_6_15585001	chr2L_15585001	RAL-409_125b
470	chr2L	15826857	15826892	chr2L	15829295	15829336	Tabor	13	2443	2.0	13.0	7.5	1.5	2479	chr2L	15826857	intergenic	not near genes	chr2L	15828096	intergenic	not near genes	chr2L	15829336	intergenic	not near genes	chr2L_13_15825001	chr2L_15825001	RAL-409_125b
472	chr2L	15955998	15956003	chr2L	15957515	15957520	hobo	4	1517	10.5	7.5	9.0	0.4	1522	chr2L	15955998	intron	beat-Ib -	chr2L	15956759	intron	beat-Ib -	chr2L	15957520	intron	beat-Ib -	chr2L_4_15955001	chr2L_15955001	RAL-409_125b
473	chr2L	15956010	15956048	chr2L	15957506	15957554	hobo	9	1501	5.0	6.5	5.8	1.3	1544	chr2L	15956010	intron	beat-Ib -	chr2L	15956782	intron	beat-Ib -	chr2L	15957554	intron	beat-Ib -	chr2L_9_15955001	chr2L_15955001	RAL-409_125b
476	chr2L	16071771	16071771	chr2L	16217660	16217661	copia	37	145889	19.5	24.5	22.0	1.6	145890	chr2L	16071771	intron	beat-Ia +	chr2L	16144716	intergenic	not near genes	chr2L	16217661	intergenic	not near genes	chr2L_37_16140001	chr2L_16140001	RAL-409_125b
477	chr2L	16141100	16141182	chr2L	16146371	16146432	copia	5	5264	0.5	5.5	3.0	1.2	5332	chr2L	16141100	intergenic	not near genes	chr2L	16143766	intergenic	not near genes	chr2L	16146432	intergenic	not near genes	chr2L_5_16140001	chr2L_16140001	RAL-409_125b
478	chr2L	16153704	16153760	chr2L	16160802	16160878	297	14	7113	4.0	2.5	3.2	3.3	7174	chr2L	16153704	intergenic	not near genes	chr2L	16157291	intergenic	not near genes	chr2L	16160878	intergenic	not near genes	chr2L_14_16155001	chr2L_16155001	RAL-409_125b
481	chr2L	16071771	16071771	chr2L	16217660	16217660	copia	19	145889	19.5	24.5	22.0	0.8	145889	chr2L	16071771	intron	beat-Ia +	chr2L	16144716	intergenic	not near genes	chr2L	16217660	intergenic	not near genes	chr2L_19_16140001	chr2L_16140001	RAL-409_125b
487	chr2L	16280247	16280281	chr2L	16281433	16281434	1360	10	1193	7.0	9.0	8.0	1.1	1187	chr2L	16280247	intron	crp -	chr2L	16280840	intron	crp -	chr2L	16281434	intron	crp -	chr2L_10_16280001	chr2L_16280001	RAL-409_125b
494	chr2L	16511928	16511979	chr2L	16519175	16519219	HMS-Beagle	6	7250	2.5	9.0	5.8	0.9	7291	chr2L	16511928	intron	CG5953 -	chr2L	16515574	intron	CG5953 -	chr2L	16519219	intron	CG5953 -	chr2L_6_16515001	chr2L_16515001	RAL-409_125b
503	chr2L	16852732	16852794	chr2L	16859923	16859986	Doc4-element	5	7190	12.5	5.5	9.0	0.5	7254	chr2L	16852732	intergenic	CG31810 -	chr2L	16856359	intron	CG31809 -	chr2L	16859986	intergenic	CG6012 -	chr2L_5_16855001	chr2L_16855001	RAL-409_125b
507	chr2L	16958073	16958123	chr2L	16962911	16962920	Doc	13	4834	5.5	7.0	6.2	1.8	4847	chr2L	16958073	intergenic	not near genes	chr2L	16960496	intergenic	not near genes	chr2L	16962920	intergenic	not near genes	chr2L_13_16960001	chr2L_16960001	RAL-409_125b
517	chr2L	17167523	17167591	chr2L	17167814	17167882	pogo	13	290	5.5	5.5	5.5	2.0	359	chr2L	17167523	intron,intron	CG34106 +,beat-IIIa +	chr2L	17167702	intron,intron	CG34106 +,beat-IIIa +	chr2L	17167882	intron,intron	CG34106 +,beat-IIIa +	chr2L_13_17165001	chr2L_17165001	RAL-409_125b
518	chr2L	17199122	17199164	chr2L	17200633	17200659	hobo	10	1514	6.0	3.5	4.8	1.7	1537	chr2L	17199122	intron	beat-IIIc -	chr2L	17199890	intron	beat-IIIc -	chr2L	17200659	intron	beat-IIIc -	chr2L_10_17195001	chr2L_17195001	RAL-409_125b
520	chr2L	17273150	17273221	chr2L	17277983	17277999	F-element	15	4821	2.0	2.0	2.0	5.0	4849	chr2L	17273150	intergenic	not near genes	chr2L	17275574	intergenic	not near genes	chr2L	17277999	intergenic	not near genes	chr2L_15_17275001	chr2L_17275001	RAL-409_125b
522	chr2L	17335494	17335522	chr2L	17336723	17336745	1360	5	1224	4.5	1.5	3.0	1.2	1251	chr2L	17335494	intergenic	not near genes	chr2L	17336120	intergenic	not near genes	chr2L	17336745	intergenic	not near genes	chr2L_5_17335001	chr2L_17335001	RAL-409_125b
528	chr2L	17687480	17687522	chr2L	17692275	17692317	F-element	12	4795	2.5	4.0	3.2	2.9	4837	chr2L	17687480	intron	CadN -	chr2L	17689898	intron	CadN -	chr2L	17692317	intron	CadN -	chr2L_12_17685001	chr2L_17685001	RAL-409_125b
531	chr2L	17727843	17727862	chr2L	17729344	17729379	hobo	10	1510	6.0	4.5	5.2	1.6	1536	chr2L	17727843	intron	CadN -	chr2L	17728611	intron	CadN -	chr2L	17729379	intron	CadN -	chr2L_10_17725001	chr2L_17725001	RAL-409_125b
534	chr2L	17819879	17819946	chr2L	17825131	17825199	copia	20	5248	7.0	5.0	6.0	2.9	5320	chr2L	17819879	intron	CadN2 -	chr2L	17822539	intron	CadN2 -	chr2L	17825199	intron	CadN2 -	chr2L_20_17820001	chr2L_17820001	RAL-409_125b
538	chr2L	17911927	17911975	chr2L	17914155	17914203	pogo	7	2227	5.5	5.5	5.5	1.1	2276	chr2L	17911927	intergenic	not near genes	chr2L	17913065	intergenic	not near genes	chr2L	17914203	intergenic	CG43271 -	chr2L_7_17910001	chr2L_17910001	RAL-409_125b
540	chr2L	17951899	17951965	chr2L	17953416	17953467	hobo	18	1515	5.5	6.0	5.8	2.6	1568	chr2L	17951899	intergenic	CR44398 -,CR44397 -	chr2L	17952683	intergenic	not near genes	chr2L	17953467	intergenic	not near genes	chr2L_18_17950001	chr2L_17950001	RAL-409_125b
541	chr2L	18051843	18051862	chr2L	18061030	18061059	roo	6	9195	9.5	4.0	6.8	0.8	9216	chr2L	18051843	intron	rdo +	chr2L	18056451	intron	rdo +	chr2L	18061059	intron	rdo +	chr2L_6_18055001	chr2L_18055001	RAL-409_125b
542	chr2L	18051870	18051899	chr2L	18061021	18061085	roo	10	9182	4.0	3.0	3.5	2.2	9215	chr2L	18051870	intron	rdo +	chr2L	18056478	intron	rdo +	chr2L	18061085	intron	rdo +	chr2L_10_18055001	chr2L_18055001	RAL-409_125b
551	chr2L	18407986	18408057	chr2L	18412820	18412899	Doc	11	4836	7.0	0.0	3.5	2.4	4913	chr2L	18407986	intergenic	not near genes	chr2L	18410442	intergenic	not near genes	chr2L	18412899	intergenic	not near genes	chr2L_11_18410001	chr2L_18410001	RAL-409_125b
569	chr2L	19147325	19147392	chr2L	19154410	19154466	297	16	7081	5.0	3.5	4.2	3.1	7141	chr2L	19147325	intron	brat +	chr2L	19150896	intron	brat +	chr2L	19154466	intron	brat +	chr2L_16_19150001	chr2L_19150001	RAL-409_125b
573	chr2L	19344972	19345037	chr2L	19357230	19357280	blood	9	12257	3.5	5.5	4.5	1.6	12308	chr2L	19344972	intron	dnt -	chr2L	19351126	intron	dnt -	chr2L	19357280	intron	dnt -	chr2L_9_19350001	chr2L_19350001	RAL-409_125b
585	chr2L	19620065	19620124	chr2L	19621084	19621098	jockey	15	1017	7.5	4.5	6.0	2.1	1033	chr2L	19620065	intron	Lar +	chr2L	19620582	intron	Lar +	chr2L	19621098	intron	Lar +	chr2L_15_19620001	chr2L_19620001	RAL-409_125b
587	chr2L	19652528	19652597	chr2L	19674012	19674081	opus	15	21480	3.5	7.0	5.2	2.4	21553	chr2L	19652528	intron	Lar +	chr2L	19663304	intron	Lar +	chr2L	19674081	intron	Lar +	chr2L_15_19660001	chr2L_19660001	RAL-409_125b
589	chr2L	19703499	19703564	chr2L	19712685	19712708	roo	18	9179	7.5	7.5	7.5	2.1	9209	chr2L	19703499	intron	Lar +	chr2L	19708104	intron	Lar +	chr2L	19712708	intron	Lar +	chr2L_18_19705001	chr2L_19705001	RAL-409_125b
591	chr2L	19737319	19737383	chr2L	19740825	19740862	1360	12	3495	3.5	3.5	3.5	2.7	3543	chr2L	19737319	intergenic	Nf-YB +	chr2L	19739090	intergenic	not near genes	chr2L	19740862	intergenic	not near genes	chr2L_12_19735001	chr2L_19735001	RAL-409_125b
592	chr2L	19762765	19762787	chr2L	19763057	19763071	pogo	5	287	9.0	1.5	5.2	0.8	306	chr2L	19762765	exon	fbp -	chr2L	19762918	intron	fbp -	chr2L	19763071	intron	fbp -	chr2L_5_19760001	chr2L_19760001	RAL-409_125b
593	chr2L	19762792	19762828	chr2L	19763053	19763120	pogo	12	288	5.0	1.5	3.2	2.9	328	chr2L	19762792	5` UTR	fbp -	chr2L	19762956	intron	fbp -	chr2L	19763120	intron	fbp -	chr2L_12_19760001	chr2L_19760001	RAL-409_125b
603	chr2L	20005843	20005892	chr2L	20010959	20010986	flea	10	5120	6.0	6.5	6.2	1.4	5143	chr2L	20005843	intron	CG43861 -	chr2L	20008414	intron	CG43861 -	chr2L	20010986	intron	CG43861 -	chr2L_10_20005001	chr2L_20005001	RAL-409_125b
614	chr2L	20272082	20272120	chr2L	20282843	20282881	copia	6	10761	5.5	7.5	6.5	0.8	10799	chr2L	20272082	intergenic	not near genes	chr2L	20277482	intergenic	not near genes	chr2L	20282881	intergenic	not near genes	chr2L_6_20275001	chr2L_20275001	RAL-409_125b
618	chr2L	20303136	20303175	chr2L	20310654	20310693	blood	5	7517	1.0	8.5	4.8	0.9	7557	chr2L	20303136	intergenic	not near genes	chr2L	20306914	intergenic	not near genes	chr2L	20310693	intergenic	not near genes	chr2L_5_20305001	chr2L_20305001	RAL-409_125b
622	chr2L	20372191	20372236	chr2L	20372476	20372527	pogo	7	289	3.0	7.0	5.0	1.2	336	chr2L	20372191	intergenic	Ugt37a1 -	chr2L	20372359	intergenic	Ugt37a1 -	chr2L	20372527	exon	Ugt37a1 -	chr2L_7_20370001	chr2L_20370001	RAL-409_125b
624	chr2L	20568613	20568680	chr2L	20569053	20569120	X-element	11	433	5.5	3.0	4.2	2.1	507	chr2L	20568613	intron	CR45347 +	chr2L	20568866	intron	CR45347 +	chr2L	20569120	intron	CR45347 +	chr2L_11_20565001	chr2L_20565001	RAL-409_125b
626	chr2L	20576179	20576232	chr2L	20583691	20583750	blood	9	7510	4.0	5.5	4.8	1.6	7571	chr2L	20576179	intergenic	CR45347 +	chr2L	20579964	intergenic	not near genes	chr2L	20583750	3` UTR	CR44909 -	chr2L_9_20575001	chr2L_20575001	RAL-409_125b
628	chr2L	20639483	20639529	chr2L	20639788	20639849	INE-1	6	315	7.5	10.0	8.8	0.6	366	chr2L	20639483	intergenic	not near genes	chr2L	20639666	intergenic	CG31680 +	chr2L	20639849	intergenic	CG31680 +	chr2L_6_20635001	chr2L_20635001	RAL-409_125b
635	chr2L	20835765	20835832	chr2L	20836532	20836584	Quasimodo	12	764	6.0	6.5	6.2	1.7	819	chr2L	20835765	5` UTR	Oseg5 -	chr2L	20836174	intergenic	Oseg5 -,Spn38F -	chr2L	20836584	intergenic	Spn38F -	chr2L_12_20835001	chr2L_20835001	RAL-409_125b
638	chr2L	20891485	20891544	chr2L	20896636	20896695	jockey	13	5149	6.5	6.5	6.5	1.7	5210	chr2L	20891485	intron,intron	CG43739 -,sky -	chr2L	20894090	intron,intron	CG43739 -,sky -	chr2L	20896695	intron,intron	CG43739 -,sky -	chr2L_13_20890001	chr2L_20890001	RAL-409_125b
642	chr2L	20976611	20976659	chr2L	20981476	20981522	X-element	9	4859	4.0	7.5	5.8	1.3	4911	chr2L	20976611	intron	CG42238 -	chr2L	20979066	intron	CG42238 -	chr2L	20981522	intron	CG42238 -	chr2L_9_20975001	chr2L_20975001	RAL-409_125b
644	chr2L	21020237	21020299	chr2L	21023964	21024023	NOF	12	3722	9.0	2.5	5.8	1.8	3786	chr2L	21020237	intron	CG42238 -	chr2L	21022130	intron	CG42238 -	chr2L	21024023	intron	CG42238 -	chr2L_12_21020001	chr2L_21020001	RAL-409_125b
645	chr2L	21041094	21041161	chr2L	21049405	21049454	Tirant	10	8303	3.0	8.0	5.5	1.5	8360	chr2L	21041094	intron	CG42238 -	chr2L	21045274	intron	CG42238 -	chr2L	21049454	intron	CG42238 -	chr2L_10_21045001	chr2L_21045001	RAL-409_125b
651	chr2L	21347511	21347564	chr2L	21355033	21355077	blood	9	7517	5.5	3.5	4.5	1.6	7566	chr2L	21347511	intron	Tsp39D +	chr2L	21351294	intron	Tsp39D +	chr2L	21355077	intron	Tsp39D +	chr2L_9_21350001	chr2L_21350001	RAL-409_125b
655	chr2L	21653171	21653214	chr2L	21656510	21656568	invader4	16	3352	5.0	5.0	5.0	2.7	3397	chr2L	21653171	intergenic	not near genes	chr2L	21654870	intergenic	not near genes	chr2L	21656568	intergenic	not near genes	chr2L_16_21650001	chr2L_21650001	RAL-409_125b
656	chr2L	21691794	21691835	chr2L	21698309	21698346	Burdock	5	6516	4.0	0.5	2.2	1.6	6552	chr2L	21691794	intron	CG31619 +	chr2L	21695070	intron	CG31619 +	chr2L	21698346	intron	CG31619 +	chr2L_5_21695001	chr2L_21695001	RAL-409_125b
665	chr2L	21981645	21981711	chr2L	21990855	21990881	roo	15	9200	4.5	5.0	4.8	2.6	9236	chr2L	21981645	exon	CG2528 -	chr2L	21986263	intron	CG2528 -	chr2L	21990881	exon	CG2528 -	chr2L_15_21985001	chr2L_21985001	RAL-409_125b
668	chr2L	22082203	22082212	chr2L	22082344	22082353	INE-1	4	141	9.0	8.5	8.8	0.4	150	chr2L	22082203	intergenic	not near genes	chr2L	22082278	intergenic	not near genes	chr2L	22082353	intergenic	not near genes	chr2L_4_22080001	chr2L_22080001	RAL-409_125b
670	chr2L	22258581	22258629	chr2L	22260755	22260803	G6	11	2173	9.0	9.5	9.2	1.1	2222	chr2L	22258581	intergenic	Tif-IA +	chr2L	22259692	intergenic	not near genes	chr2L	22260803	intergenic	not near genes	chr2L_11_22255001	chr2L_22255001	RAL-409_125b
671	chr2L	22515103	22515129	chr2L	22522603	22522629	HMS-Beagle2	7	7499	10.0	2.0	6.0	1.0	7526	chr2L	22515103	intergenic	not near genes	chr2L	22518866	intergenic	not near genes	chr2L	22522629	intergenic	not near genes	chr2L_7_22515001	chr2L_22515001	RAL-409_125b
673	chr2L	22548884	22548933	chr2L	22550132	22550208	1360	7	1259	1.5	7.5	4.5	1.3	1324	chr2L	22548884	intergenic	CG17490 +	chr2L	22549546	intergenic	not near genes	chr2L	22550208	intergenic	CG17493 +	chr2L_7_22545001	chr2L_22545001	RAL-409_125b
674	chr2L	22581931	22581996	chr2L	22583764	22583836	S-element	16	1838	3.5	5.0	4.2	3.1	1905	chr2L	22581931	intron	CG17494 +	chr2L	22582884	intron	CG17494 +	chr2L	22583836	intron	CG17494 +	chr2L_16_22580001	chr2L_22580001	RAL-409_125b
676	chr2L	22776378	22776451	chr2L	22778217	22778240	S-element	16	1835	4.5	6.0	5.2	2.6	1862	chr2L	22776378	intergenic	not near genes	chr2L	22777309	intergenic	not near genes	chr2L	22778240	intergenic	not near genes	chr2L_16_22775001	chr2L_22775001	RAL-409_125b
680	chr2R	469930	469975	chr2R	473210	473266	F-element	5	3275	2.5	3.0	2.8	1.3	3336	chr2R	469930	intergenic	not near genes	chr2R	471598	intergenic	not near genes	chr2R	473266	intergenic	not near genes	chr2R_5_470001	chr2R_470001	RAL-409_125b
681	chr2R	529316	529349	chr2R	537991	538016	Max-element	6	8673	5.0	9.0	7.0	0.8	8700	chr2R	529316	intron	CG40378 +	chr2R	533666	intron	CG40378 +	chr2R	538016	intron	CG40378 +	chr2R_6_530001	chr2R_530001	RAL-409_125b
683	chr2R	1516563	1516603	chr2R	1521341	1521381	1731	24	4777	17.5	17.0	17.2	1.3	4818	chr2R	1516563	exon	Maf1 -	chr2R	1518972	intron	Maf1 -	chr2R	1521381	5` UTR	Maf1 -	chr2R_24_1515001	chr2R_1515001	RAL-409_125b
687	chr2R	2110463	2110499	chr2R	2118071	2118107	17.6	5	7607	9.0	4.0	6.5	0.7	7644	chr2R	2110463	intron	CG17684 -	chr2R	2114285	intron	CG17684 -	chr2R	2118107	intron	CG17684 -	chr2R_5_2110001	chr2R_2110001	RAL-409_125b
688	chr2R	2498950	2499004	chr2R	2508147	2508201	roo	19	9194	3.5	6.0	4.8	3.3	9251	chr2R	2498950	intron	MFS17 -	chr2R	2503576	intron	MFS17 -	chr2R	2508201	intron	MFS17 -	chr2R_19_2500001	chr2R_2500001	RAL-409_125b
690	chr2R	2591496	2591507	chr2R	2594212	2594233	roo	4	2720	33.5	19.0	26.2	0.1	2737	chr2R	2591496	intergenic	not near genes	chr2R	2592864	intergenic	not near genes	chr2R	2594233	intergenic	not near genes	chr2R_4_2590001	chr2R_2590001	RAL-409_125b
691	chr2R	2875345	2875390	chr2R	2878900	2878911	HMS-Beagle	7	3557	32.0	35.0	33.5	0.2	3566	chr2R	2875345	intergenic	not near genes	chr2R	2877128	intergenic	not near genes	chr2R	2878911	intergenic	not near genes	chr2R_7_2875001	chr2R_2875001	RAL-409_125b
692	chr2R	3144041	3144107	chr2R	3393369	3393429	Doc	5	249324	22.0	5.0	13.5	0.3	249388	chr2R	3144041	intron	CG42596 +	chr2R	3268735	intergenic	not near genes	chr2R	3393429	intergenic	not near genes	chr2R_5_3265001	chr2R_3265001	RAL-409_125b
696	chr2R	3532585	3532616	chr2R	3536073	3536109	Doc	7	3492	4.5	7.5	6.0	1.0	3524	chr2R	3532585	intergenic	not near genes	chr2R	3534347	intergenic	not near genes	chr2R	3536109	intergenic	not near genes	chr2R_7_3530001	chr2R_3530001	RAL-409_125b
702	chr2R	4622922	4622963	chr2R	4624120	4624161	1360	8	1196	8.0	8.5	8.2	0.9	1239	chr2R	4622922	intergenic	CR44101 -	chr2R	4623542	intergenic	not near genes	chr2R	4624161	intergenic	not near genes	chr2R_8_4620001	chr2R_4620001	RAL-409_125b
708	chr2R	4838830	4838889	chr2R	4840398	4840461	transib2	16	1570	7.0	2.5	4.8	2.8	1631	chr2R	4838830	intergenic	not near genes	chr2R	4839646	intergenic	not near genes	chr2R	4840461	intergenic	not near genes	chr2R_16_4835001	chr2R_4835001	RAL-409_125b
709	chr2R	4870721	4870733	chr2R	4871254	4871289	R1A1-element	5	554	11.0	6.0	8.5	0.5	568	chr2R	4870721	intergenic	not near genes	chr2R	4871005	intergenic	not near genes	chr2R	4871289	intergenic	not near genes	chr2R_5_4870001	chr2R_4870001	RAL-409_125b
714	chr2R	5188657	5188731	chr2R	5189400	5189469	gypsy8	20	736	6.5	5.5	6.0	2.9	812	chr2R	5188657	intron	Nipped-A -	chr2R	5189063	intron	Nipped-A -	chr2R	5189469	intron	Nipped-A -	chr2R_20_5185001	chr2R_5185001	RAL-409_125b
717	chr2R	5417952	5418016	chr2R	5420634	5420698	Burdock	26	2679	6.5	6.0	6.2	3.6	2746	chr2R	5417952	intron	laccase2 +	chr2R	5419325	intron	laccase2 +	chr2R	5420698	intron	laccase2 +	chr2R_26_5415001	chr2R_5415001	RAL-409_125b
722	chr2R	5543205	5543215	chr2R	5547327	5547349	invader1	7	4131	0.0	10.0	5.0	1.2	4144	chr2R	5543205	intron	CG30438 +	chr2R	5545277	intron	CG30438 +	chr2R	5547349	intron	CG30438 +	chr2R_7_5545001	chr2R_5545001	RAL-409_125b
732	chr2R	5869237	5869299	chr2R	5874363	5874425	flea	19	5124	3.0	5.5	4.2	3.7	5188	chr2R	5869237	intergenic	not near genes	chr2R	5871831	intergenic	not near genes	chr2R	5874425	intergenic	not near genes	chr2R_19_5870001	chr2R_5870001	RAL-409_125b
735	chr2R	5902115	5902171	chr2R	5909724	5909774	17.6	9	7604	6.0	5.0	5.5	1.4	7659	chr2R	5902115	5` UTR	CG43366 +	chr2R	5905944	intron	CG43366 +	chr2R	5909774	intron	CG43366 +	chr2R_9_5905001	chr2R_5905001	RAL-409_125b
740	chr2R	6096699	6096750	chr2R	6101919	6101946	BS	10	5227	5.5	9.5	7.5	1.2	5247	chr2R	6096699	intron	EcR -	chr2R	6099322	intron	EcR -	chr2R	6101946	intron	EcR -	chr2R_10_6095001	chr2R_6095001	RAL-409_125b
745	chr2R	6494519	6494538	chr2R	6499331	6499350	F-element	4	4812	8.0	2.0	5.0	0.7	4831	chr2R	6494519	intergenic	not near genes	chr2R	6496934	intergenic	not near genes	chr2R	6499350	intergenic	not near genes	chr2R_4_6495001	chr2R_6495001	RAL-409_125b
747	chr2R	6579758	6579793	chr2R	6584894	6584930	flea	14	5134	5.0	3.0	4.0	2.8	5172	chr2R	6579758	intron	jing +	chr2R	6582344	intron	jing +	chr2R	6584930	intron	jing +	chr2R_14_6580001	chr2R_6580001	RAL-409_125b
750	chr2R	6952138	6952180	chr2R	6959760	6959810	opus	10	7629	5.5	7.0	6.2	1.4	7672	chr2R	6952138	intron,intron,exon	mim -,CheB42c -,ppk25 +	chr2R	6955974	intron,intron	mim -,CheB42c -	chr2R	6959810	intron,intron	mim -,CheB42c -	chr2R_10_6955001	chr2R_6955001	RAL-409_125b
754	chr2R	7196532	7196584	chr2R	7201357	7201409	F-element	11	4824	8.5	6.5	7.5	1.3	4877	chr2R	7196532	intron	pk +	chr2R	7198970	intron	pk +	chr2R	7201409	intron	pk +	chr2R_11_7195001	chr2R_7195001	RAL-409_125b
755	chr2R	7209845	7209861	chr2R	7217629	7217672	roo	5	7796	1.0	4.5	2.8	1.3	7827	chr2R	7209845	intron	pk +	chr2R	7213758	intron	pk +	chr2R	7217672	intron	pk +	chr2R_5_7210001	chr2R_7210001	RAL-409_125b
756	chr2R	7235776	7235843	chr2R	7240918	7240970	jockey	7	5134	7.0	3.0	5.0	1.2	5194	chr2R	7235776	intergenic	not near genes	chr2R	7238373	intergenic	not near genes	chr2R	7240970	intergenic	not near genes	chr2R_7_7235001	chr2R_7235001	RAL-409_125b
758	chr2R	7434851	7434907	chr2R	7439202	7439246	Juan	10	4349	8.5	4.0	6.2	1.4	4395	chr2R	7434851	3` UTR	so +	chr2R	7437048	intergenic	not near genes	chr2R	7439246	intergenic	not near genes	chr2R_10_7435001	chr2R_7435001	RAL-409_125b
760	chr2R	7608373	7608424	chr2R	7613616	7613675	I-element	7	5247	8.0	0.0	4.0	1.4	5302	chr2R	7608373	intron	CG1358 -	chr2R	7611024	intron	CG1358 -	chr2R	7613675	intron	CG1358 -	chr2R_7_7610001	chr2R_7610001	RAL-409_125b
764	chr2R	7815648	7815679	chr2R	7822151	7822198	Burdock	7	6514	6.5	6.0	6.2	1.0	6550	chr2R	7815648	intergenic	CG1882 +	chr2R	7818923	intergenic	not near genes	chr2R	7822198	3` UTR	cathD -	chr2R_7_7815001	chr2R_7815001	RAL-409_125b
766	chr2R	7869148	7869202	chr2R	7873984	7874038	Doc	20	4832	8.0	5.0	6.5	2.7	4890	chr2R	7869148	intron	Dgk -	chr2R	7871593	intron	Dgk -	chr2R	7874038	intron	Dgk -	chr2R_20_7870001	chr2R_7870001	RAL-409_125b
783	chr2R	8330844	8330886	chr2R	8331348	8331422	roo	7	527	5.0	2.5	3.8	1.5	578	chr2R	8330844	intron	pdm3 +	chr2R	8331133	intron	pdm3 +	chr2R	8331422	intron	pdm3 +	chr2R_7_8330001	chr2R_8330001	RAL-409_125b
786	chr2R	8398204	8398217	chr2R	8403000	8403038	Doc	10	4821	4.5	3.5	4.0	2.0	4834	chr2R	8398204	intron	CG2121 -	chr2R	8400621	intron	CG2121 -	chr2R	8403038	intron	CG2121 -	chr2R_10_8400001	chr2R_8400001	RAL-409_125b
793	chr2R	8722731	8722788	chr2R	8723015	8723069	pogo	12	278	6.5	5.0	5.8	1.8	338	chr2R	8722731	intron	CG14767 -	chr2R	8722900	intron	CG14767 -	chr2R	8723069	intron	CG14767 -	chr2R_12_8720001	chr2R_8720001	RAL-409_125b
795	chr2R	8777878	8777941	chr2R	8784119	8784195	diver	11	6250	2.5	5.0	3.8	2.3	6317	chr2R	8777878	intergenic	not near genes	chr2R	8781036	intergenic	not near genes	chr2R	8784195	intergenic	not near genes	chr2R_11_8780001	chr2R_8780001	RAL-409_125b
799	chr2R	9151264	9151305	chr2R	9157776	9157823	Burdock	8	6516	7.0	9.0	8.0	0.9	6559	chr2R	9151264	exon	CG30345 +	chr2R	9154544	intergenic	not near genes	chr2R	9157823	intergenic	CG8008 -	chr2R_8_9150001	chr2R_9150001	RAL-409_125b
801	chr2R	9212666	9212689	chr2R	9213184	9213217	roo	4	521	10.5	5.5	8.0	0.4	551	chr2R	9212666	intergenic	CR45309 +	chr2R	9212942	intergenic	CR45309 +	chr2R	9213217	5` UTR	CR45309 +	chr2R_4_9210001	chr2R_9210001	RAL-409_125b
817	chr2R	9726573	9726636	chr2R	9734174	9734237	17.6	10	7601	6.5	4.0	5.2	1.6	7664	chr2R	9726573	intron	sqa -	chr2R	9730405	intron	sqa -	chr2R	9734237	intron	sqa -	chr2R_10_9730001	chr2R_9730001	RAL-409_125b
819	chr2R	9871023	9871067	chr2R	9871552	9871603	roo	15	530	0.0	8.5	4.2	2.9	580	chr2R	9871023	intron	cbx -	chr2R	9871313	intron	cbx -	chr2R	9871603	intron,5` UTR	cbx -,CG18446 +	chr2R_15_9870001	chr2R_9870001	RAL-409_125b
821	chr2R	9945405	9945453	chr2R	9945641	9945693	BS	5	232	6.5	6.5	6.5	0.7	288	chr2R	9945405	intron	Mef2 -	chr2R	9945549	intron	Mef2 -	chr2R	9945693	intron	Mef2 -	chr2R_5_9945001	chr2R_9945001	RAL-409_125b
825	chr2R	10005814	10005865	chr2R	10007018	10007057	1360	14	1203	5.5	3.5	4.5	2.5	1243	chr2R	10005814	intron	Pka-R2 -	chr2R	10006436	intron	Pka-R2 -	chr2R	10007057	intron	Pka-R2 -	chr2R_14_10005001	chr2R_10005001	RAL-409_125b
835	chr2R	10176841	10176901	chr2R	10186058	10186121	roo	21	9219	2.5	2.5	2.5	6.0	9280	chr2R	10176841	intron	KCNQ -	chr2R	10181481	intron	KCNQ -	chr2R	10186121	intron	KCNQ -	chr2R_21_10180001	chr2R_10180001	RAL-409_125b
859	chr2R	10979655	10979678	chr2R	10980135	10980166	297	5	502	3.5	3.5	3.5	1.1	511	chr2R	10979655	intergenic	not near genes	chr2R	10979910	intergenic	not near genes	chr2R	10980166	intergenic	not near genes	chr2R_5_10975001	chr2R_10975001	RAL-409_125b
862	chr2R	11009784	11009840	chr2R	11018993	11019059	roo	10	9216	7.0	6.0	6.5	1.3	9275	chr2R	11009784	intron	luna -	chr2R	11014422	intron	luna -	chr2R	11019059	intron	luna -	chr2R_10_11010001	chr2R_11010001	RAL-409_125b
863	chr2R	11019858	11019892	chr2R	11024974	11025008	jockey	6	5113	4.0	8.5	6.2	0.8	5150	chr2R	11019858	intron	luna -	chr2R	11022433	intron	luna -	chr2R	11025008	intron	luna -	chr2R_6_11020001	chr2R_11020001	RAL-409_125b
864	chr2R	11019896	11019904	chr2R	11024968	11024999	jockey	5	5095	3.5	7.0	5.2	0.8	5103	chr2R	11019896	intron	luna -	chr2R	11022448	intron	luna -	chr2R	11024999	intron	luna -	chr2R_5_11020001	chr2R_11020001	RAL-409_125b
872	chr2R	11207785	11207831	chr2R	11208023	11208074	BS	6	238	7.5	11.5	9.5	0.6	289	chr2R	11207785	intron	shn +	chr2R	11207930	intron	shn +	chr2R	11208074	intron	shn +	chr2R_6_11205001	chr2R_11205001	RAL-409_125b
874	chr2R	11297589	11297640	chr2R	11301963	11302005	flea	14	4370	6.0	0.0	3.0	3.5	4416	chr2R	11297589	intergenic	CG42336 -	chr2R	11299797	intergenic	not near genes	chr2R	11302005	5` UTR	CG7741 +	chr2R_14_11295001	chr2R_11295001	RAL-409_125b
876	chr2R	11415496	11415535	chr2R	11418668	11418734	opus	11	3186	6.5	4.5	5.5	1.7	3238	chr2R	11415496	intron	Drip -	chr2R	11417115	intron	Drip -	chr2R	11418734	intron	Drip -	chr2R_11_11415001	chr2R_11415001	RAL-409_125b
878	chr2R	11472618	11472675	chr2R	11473855	11473882	pogo	14	1240	9.5	6.0	7.8	1.6	1264	chr2R	11472618	intergenic	not near genes	chr2R	11473250	intergenic	not near genes	chr2R	11473882	intergenic	not near genes	chr2R_14_11470001	chr2R_11470001	RAL-409_125b
906	chr2R	12501652	12501681	chr2R	12503864	12503870	Rt1c	4	2203	13.5	6.0	9.8	0.4	2218	chr2R	12501652	intron	fdl -	chr2R	12502761	intron	fdl -	chr2R	12503870	intron	fdl -	chr2R_4_12500001	chr2R_12500001	RAL-409_125b
907	chr2R	12501690	12501717	chr2R	12503857	12503907	Rt1c	9	2190	5.0	5.5	5.2	1.5	2217	chr2R	12501690	intron	fdl -	chr2R	12502798	intron	fdl -	chr2R	12503907	intron	fdl -	chr2R_9_12500001	chr2R_12500001	RAL-409_125b
917	chr2R	12707469	12707545	chr2R	12715885	12715961	roo	7	8415	5.5	1.5	3.5	1.6	8492	chr2R	12707469	intron	CG42663 +	chr2R	12711715	intron	CG42663 +	chr2R	12715961	intron	CG42663 +	chr2R_7_12710001	chr2R_12710001	RAL-409_125b
919	chr2R	12789260	12789319	chr2R	12797656	12797705	roo	16	8390	5.5	3.0	4.2	3.1	8445	chr2R	12789260	intron,3` UTR	sca +,CR45137 -	chr2R	12793482	intron,intron	sca +,CR45137 -	chr2R	12797705	intron,3` UTR	sca +,CR45137 -	chr2R_16_12790001	chr2R_12790001	RAL-409_125b
921	chr2R	12819403	12819432	chr2R	12824522	12824549	jockey	5	5116	9.0	6.0	7.5	0.6	5146	chr2R	12819403	intergenic	not near genes	chr2R	12821976	intergenic	not near genes	chr2R	12824549	intergenic	not near genes	chr2R_5_12820001	chr2R_12820001	RAL-409_125b
922	chr2R	12819433	12819477	chr2R	12824520	12824571	jockey	11	5105	3.0	6.0	4.5	2.0	5138	chr2R	12819433	intergenic	not near genes	chr2R	12822002	intergenic	not near genes	chr2R	12824571	intergenic	not near genes	chr2R_11_12820001	chr2R_12820001	RAL-409_125b
929	chr2R	13136811	13136856	chr2R	13141659	13141704	Doc	14	4846	7.0	5.0	6.0	2.0	4893	chr2R	13136811	exon	Cap-G +	chr2R	13139258	intron	Cap-G +	chr2R	13141704	intron	Cap-G +	chr2R_14_13135001	chr2R_13135001	RAL-409_125b
944	chr2R	13580455	13580478	chr2R	13580855	13580860	jockey	5	394	12.0	4.0	8.0	0.6	405	chr2R	13580455	3` UTR	CG6191 -	chr2R	13580658	3` UTR,3` UTR	CG6191 -,CG45088 -	chr2R	13580860	3` UTR,3` UTR	CG6191 -,CG45088 -	chr2R_5_13580001	chr2R_13580001	RAL-409_125b
945	chr2R	13580482	13580530	chr2R	13580854	13580901	jockey	13	389	7.0	3.5	5.2	2.1	419	chr2R	13580482	3` UTR	CG6191 -	chr2R	13580692	3` UTR,3` UTR	CG6191 -,CG45088 -	chr2R	13580901	3` UTR,3` UTR	CG6191 -,CG45088 -	chr2R_13_13580001	chr2R_13580001	RAL-409_125b
955	chr2R	13728096	13728153	chr2R	13735803	13735860	opus	9	7704	7.0	4.5	5.8	1.3	7764	chr2R	13728096	intron	fas +	chr2R	13731978	intron	fas +	chr2R	13735860	intron	fas +	chr2R_9_13730001	chr2R_13730001	RAL-409_125b
958	chr2R	13905568	13905625	chr2R	13907600	13907650	Rt1a	13	2023	7.0	9.0	8.0	1.4	2082	chr2R	13905568	intron	shot -	chr2R	13906609	intron	shot -	chr2R	13907650	intron	shot -	chr2R_13_13905001	chr2R_13905001	RAL-409_125b
969	chr2R	14467246	14467323	chr2R	14476443	14476509	roo	14	9197	2.5	3.0	2.8	3.7	9263	chr2R	14467246	intergenic	not near genes	chr2R	14471878	intergenic	not near genes	chr2R	14476509	5` UTR	CR44462 +	chr2R_14_14470001	chr2R_14470001	RAL-409_125b
970	chr2R	14497373	14497422	chr2R	14498589	14498644	1360	11	1221	3.0	3.0	3.0	2.8	1271	chr2R	14497373	3` UTR	Cpsf160 -	chr2R	14498008	intron	Cpsf160 -	chr2R	14498644	3` UTR	Cpsf160 -	chr2R_11_14495001	chr2R_14495001	RAL-409_125b
986	chr2R	14889168	14889242	chr2R	14897826	14897892	Max-element	20	8652	7.5	0.0	3.8	4.2	8724	chr2R	14889168	intergenic	Cyp6a8 -	chr2R	14893530	intergenic	not near genes	chr2R	14897892	intergenic	not near genes	chr2R_20_14890001	chr2R_14890001	RAL-409_125b
995	chr2R	15004684	15004750	chr2R	15005060	15005129	jockey	13	379	4.5	7.5	6.0	1.9	445	chr2R	15004684	intergenic	not near genes	chr2R	15004906	intergenic	not near genes	chr2R	15005129	intergenic	not near genes	chr2R_13_15000001	chr2R_15000001	RAL-409_125b
996	chr2R	15015426	15015480	chr2R	15022888	15022913	mdg1	12	7461	5.5	2.0	3.8	2.5	7487	chr2R	15015426	intron	hbs +	chr2R	15019170	intron	hbs +	chr2R	15022913	intron	hbs +	chr2R_12_15015001	chr2R_15015001	RAL-409_125b
1001	chr2R	15119279	15119330	chr2R	15127810	15127846	Tirant	13	8514	9.0	6.5	7.8	1.5	8567	chr2R	15119279	intron	chn +	chr2R	15123562	intron	chn +	chr2R	15127846	intron	chn +	chr2R_13_15120001	chr2R_15120001	RAL-409_125b
1029	chr2R	16061682	16061713	chr2R	16064363	16064394	Burdock	11	2679	11.5	3.5	7.5	1.3	2712	chr2R	16061682	intergenic	not near genes	chr2R	16063038	intergenic	not near genes	chr2R	16064394	intergenic	not near genes	chr2R_11_16060001	chr2R_16060001	RAL-409_125b
1036	chr2R	16539591	16539616	chr2R	16544847	16544866	copia	5	5253	8.0	0.0	4.0	1.0	5275	chr2R	16539591	intergenic	not near genes	chr2R	16542228	intergenic	not near genes	chr2R	16544866	intergenic	not near genes	chr2R_5_16540001	chr2R_16540001	RAL-409_125b
1058	chr2R	17147210	17147254	chr2R	17152280	17152327	jockey	5	5076	8.0	6.0	7.0	0.6	5117	chr2R	17147210	intergenic	not near genes	chr2R	17149768	intergenic	not near genes	chr2R	17152327	intergenic	not near genes	chr2R_5_17145001	chr2R_17145001	RAL-409_125b
1063	chr2R	17236480	17236525	chr2R	17241734	17241773	copia	12	5248	5.0	7.0	6.0	1.7	5293	chr2R	17236480	intron	mbl +	chr2R	17239126	intron	mbl +	chr2R	17241773	intron	mbl +	chr2R_12_17235001	chr2R_17235001	RAL-409_125b
1073	chr2R	17485871	17485933	chr2R	17490683	17490743	F-element	17	4810	6.0	7.5	6.8	2.2	4872	chr2R	17485871	5` UTR,intron	CG43110 -,NT5E-2 +	chr2R	17488307	intron	NT5E-2 +	chr2R	17490743	intron	NT5E-2 +	chr2R_17_17485001	chr2R_17485001	RAL-409_125b
1079	chr2R	17782324	17782374	chr2R	17783577	17783627	pogo	8	1253	8.0	4.0	6.0	1.1	1303	chr2R	17782324	intergenic	CG33981 -,fab1 -	chr2R	17782976	intergenic	not near genes	chr2R	17783627	intergenic	mir-31a -	chr2R_8_17780001	chr2R_17780001	RAL-409_125b
1080	chr2R	17784017	17784055	chr2R	17784288	17784340	pogo	12	281	3.5	12.0	7.8	1.4	323	chr2R	17784017	intergenic	mir-31a -	chr2R	17784178	intergenic	mir-31a -	chr2R	17784340	intergenic	mir-31a -	chr2R_12_17780001	chr2R_17780001	RAL-409_125b
1093	chr2R	18111634	18111672	chr2R	18115549	18115590	F-element	4	3917	9.5	0.5	5.0	0.7	3956	chr2R	18111634	intergenic	not near genes	chr2R	18113612	intergenic	not near genes	chr2R	18115590	intergenic	not near genes	chr2R_4_18110001	chr2R_18110001	RAL-409_125b
1099	chr2R	18358380	18358403	chr2R	18372643	18372666	roo	5	14262	2.0	11.0	6.5	0.7	14286	chr2R	18358380	intergenic	not near genes	chr2R	18365523	intergenic	not near genes	chr2R	18372666	intergenic	not near genes	chr2R_5_18365001	chr2R_18365001	RAL-409_125b
1108	chr2R	18487788	18487828	chr2R	18495289	18495314	blood	12	7498	2.5	3.5	3.0	3.0	7526	chr2R	18487788	intron	CG30116 -	chr2R	18491551	intron	CG30116 -	chr2R	18495314	intron	CG30116 -	chr2R_12_18490001	chr2R_18490001	RAL-409_125b
1111	chr2R	18575758	18575791	chr2R	18581989	18582029	3S18	6	6233	9.5	6.5	8.0	0.7	6271	chr2R	18575758	intron	GEFmeso -	chr2R	18578894	intron	GEFmeso -	chr2R	18582029	intron	GEFmeso -	chr2R_6_18575001	chr2R_18575001	RAL-409_125b
1112	chr2R	18575808	18575810	chr2R	18581985	18582048	3S18	5	6205	8.0	6.0	7.0	0.6	6240	chr2R	18575808	intron	GEFmeso -	chr2R	18578928	intron	GEFmeso -	chr2R	18582048	intron	GEFmeso -	chr2R_5_18575001	chr2R_18575001	RAL-409_125b
1113	chr2R	18575811	18575816	chr2R	18581984	18582024	3S18	6	6200	6.5	6.0	6.2	0.8	6213	chr2R	18575811	intron	GEFmeso -	chr2R	18578918	intron	GEFmeso -	chr2R	18582024	intron	GEFmeso -	chr2R_6_18575001	chr2R_18575001	RAL-409_125b
1114	chr2R	18590819	18590894	chr2R	18600021	18600076	roo	13	9190	4.5	7.0	5.8	1.9	9257	chr2R	18590819	intron	GEFmeso -	chr2R	18595448	intron	GEFmeso -	chr2R	18600076	intron	GEFmeso -	chr2R_13_18595001	chr2R_18595001	RAL-409_125b
1151	chr2R	19715818	19715854	chr2R	19723332	19723351	blood	7	7512	9.0	9.5	9.2	0.7	7533	chr2R	19715818	intergenic	not near genes	chr2R	19719584	intergenic	not near genes	chr2R	19723351	intergenic	not near genes	chr2R_7_19715001	chr2R_19715001	RAL-409_125b
1152	chr2R	19776570	19776613	chr2R	19779943	19779981	jockey	6	3368	3.5	8.0	5.8	0.9	3411	chr2R	19776570	intergenic	not near genes	chr2R	19778276	intergenic	not near genes	chr2R	19779981	intergenic	not near genes	chr2R_6_19775001	chr2R_19775001	RAL-409_125b
1155	chr2R	19914816	19914870	chr2R	19922263	19922317	mdg1	14	7458	3.5	2.0	2.8	3.7	7501	chr2R	19914816	intergenic	not near genes	chr2R	19918566	intergenic	not near genes	chr2R	19922317	intergenic	not near genes	chr2R_14_19915001	chr2R_19915001	RAL-409_125b
1156	chr2R	19957420	19957449	chr2R	19962646	19962684	copia	8	5237	5.0	5.5	5.2	1.3	5264	chr2R	19957420	intergenic	CG44623 +	chr2R	19960052	intergenic	not near genes	chr2R	19962684	intergenic	not near genes	chr2R_8_19960001	chr2R_19960001	RAL-409_125b
1160	chr2R	20069210	20069242	chr2R	20071883	20071922	opus	6	2678	3.5	2.0	2.8	1.6	2712	chr2R	20069210	intergenic	not near genes	chr2R	20070566	intergenic	not near genes	chr2R	20071922	intergenic	not near genes	chr2R_6_20070001	chr2R_20070001	RAL-409_125b
1162	chr2R	20087993	20088011	chr2R	20088111	20088169	1360	4	148	4.0	5.5	4.8	0.7	176	chr2R	20087993	intergenic	not near genes	chr2R	20088081	intergenic	not near genes	chr2R	20088169	intergenic	not near genes	chr2R_4_20085001	chr2R_20085001	RAL-409_125b
1173	chr2R	20368476	20368489	chr2R	20377689	20377702	roo	4	9212	10.0	6.5	8.2	0.4	9226	chr2R	20368476	intergenic	not near genes	chr2R	20373089	intergenic	not near genes	chr2R	20377702	intergenic	not near genes	chr2R_4_20370001	chr2R_20370001	RAL-409_125b
1188	chr2R	20739405	20739466	chr2R	20744217	20744269	F-element	12	4811	3.5	5.0	4.2	2.3	4864	chr2R	20739405	intron	dpr +	chr2R	20741837	intron	dpr +	chr2R	20744269	intron	dpr +	chr2R_12_20740001	chr2R_20740001	RAL-409_125b
1190	chr2R	20783266	20783314	chr2R	20788083	20788135	F-element	9	4821	6.5	4.0	5.2	1.5	4869	chr2R	20783266	intergenic	not near genes	chr2R	20785700	intergenic	not near genes	chr2R	20788135	intergenic	CG43666 -	chr2R_9_20785001	chr2R_20785001	RAL-409_125b
1193	chr2R	21151106	21151140	chr2R	21153762	21153823	opus	6	2674	0.5	6.0	3.2	1.4	2717	chr2R	21151106	intron	CG30389 -	chr2R	21152464	intron	CG30389 -	chr2R	21153823	intron	CG30389 -	chr2R_6_21150001	chr2R_21150001	RAL-409_125b
1208	chr2R	21738246	21738306	chr2R	21747437	21747455	roo	4	9187	2.5	5.0	3.8	0.8	9209	chr2R	21738246	intergenic	not near genes	chr2R	21742850	intergenic	not near genes	chr2R	21747455	intergenic	not near genes	chr2R_4_21740001	chr2R_21740001	RAL-409_125b
1209	chr2R	21753050	21753107	chr2R	21753580	21753582	roo	21	528	5.0	6.0	5.5	3.2	532	chr2R	21753050	intergenic	not near genes	chr2R	21753316	intergenic	not near genes	chr2R	21753582	intergenic	not near genes	chr2R_21_21750001	chr2R_21750001	RAL-409_125b
1213	chr2R	21809480	21809544	chr2R	21817770	21817834	roo	15	8287	8.0	5.5	6.8	1.9	8354	chr2R	21809480	intergenic	not near genes	chr2R	21813657	intergenic	not near genes	chr2R	21817834	intergenic	not near genes	chr2R_15_21810001	chr2R_21810001	RAL-409_125b
1235	chr2R	22349654	22349719	chr2R	22351482	22351522	jockey	15	1824	6.0	5.5	5.8	2.2	1868	chr2R	22349654	intron	Liprin-gamma -	chr2R	22350588	intron	Liprin-gamma -	chr2R	22351522	intron	Liprin-gamma -	chr2R_15_22350001	chr2R_22350001	RAL-409_125b
1237	chr2R	22465280	22465328	chr2R	22465529	22465577	BS	14	248	9.0	8.0	8.5	1.5	297	chr2R	22465280	intron	CG10384 +	chr2R	22465428	intron	CG10384 +	chr2R	22465577	intron	CG10384 +	chr2R_14_22465001	chr2R_22465001	RAL-409_125b
1240	chr2R	22525711	22525769	chr2R	22529316	22529362	jockey	8	3597	7.0	10.0	8.5	0.8	3651	chr2R	22525711	intron	px -	chr2R	22527536	intron	px -	chr2R	22529362	intron	px -	chr2R_8_22525001	chr2R_22525001	RAL-409_125b
1242	chr2R	22580417	22580435	chr2R	22586612	22586627	diver	4	6196	0.0	5.5	2.8	1.1	6210	chr2R	22580417	intron	dnr1 -	chr2R	22583522	intron	dnr1 -	chr2R	22586627	intron	dnr1 -	chr2R_4_22580001	chr2R_22580001	RAL-409_125b
1244	chr2R	22774925	22774950	chr2R	22775394	22775405	jockey	5	462	9.5	6.0	7.8	0.6	480	chr2R	22774925	intron	CG42260 -	chr2R	22775165	intron	CG42260 -	chr2R	22775405	intron	CG42260 -	chr2R_5_22775001	chr2R_22775001	RAL-409_125b
1245	chr2R	22774951	22774987	chr2R	22775388	22775456	jockey	9	460	5.5	5.0	5.2	1.5	505	chr2R	22774951	intron	CG42260 -	chr2R	22775204	intron	CG42260 -	chr2R	22775456	intron	CG42260 -	chr2R_9_22775001	chr2R_22775001	RAL-409_125b
1247	chr2R	22843024	22843045	chr2R	22845040	22845061	flea	5	2015	4.0	9.0	6.5	0.7	2037	chr2R	22843024	intergenic	CG9826 +	chr2R	22844042	intergenic	not near genes	chr2R	22845061	intergenic	not near genes	chr2R_5_22840001	chr2R_22840001	RAL-409_125b
1261	chr2R	23402592	23402606	chr2R	23407689	23407703	flea	5	5097	2.0	5.5	3.8	1.0	5111	chr2R	23402592	intergenic	CG3520 -	chr2R	23405148	intergenic	not near genes	chr2R	23407703	intergenic	not near genes	chr2R_5_23405001	chr2R_23405001	RAL-409_125b
1266	chr2R	23529572	23529595	chr2R	23537148	23537189	412	6	7595	7.0	4.0	5.5	0.9	7617	chr2R	23529572	intron	bw -	chr2R	23533380	intron	bw -	chr2R	23537189	exon	bw -	chr2R_6_23530001	chr2R_23530001	RAL-409_125b
1274	chr2R	23914263	23914287	chr2R	23921929	23921957	412	10	7671	13.5	6.5	10.0	0.9	7694	chr2R	23914263	exon	kcc +	chr2R	23918110	intron	kcc +	chr2R	23921957	intron	kcc +	chr2R_10_23915001	chr2R_23915001	RAL-409_125b
1275	chr2R	23914288	23914324	chr2R	23921926	23921984	412	11	7663	7.5	6.0	6.8	1.4	7696	chr2R	23914288	exon	kcc +	chr2R	23918136	intron	kcc +	chr2R	23921984	exon	kcc +	chr2R_11_23915001	chr2R_23915001	RAL-409_125b
1282	chr2R	24147033	24147096	chr2R	24154656	24154717	412	12	7618	4.0	6.0	5.0	2.0	7684	chr2R	24147033	intron	Dat +	chr2R	24150875	intron	Dat +	chr2R	24154717	intron	Dat +	chr2R_12_24150001	chr2R_24150001	RAL-409_125b
1283	chr2R	24177199	24177258	chr2R	24184734	24184793	412	17	7533	9.5	8.0	8.8	1.7	7594	chr2R	24177199	3` UTR	Nop60B +	chr2R	24180996	intron	Nop60B +	chr2R	24184793	3` UTR	Nop60B +	chr2R_17_24180001	chr2R_24180001	RAL-409_125b
1288	chr2R	24353393	24353430	chr2R	24361805	24361816	roo	10	8407	8.0	9.0	8.5	1.1	8423	chr2R	24353393	intron,intron	bs +,CR44811 -	chr2R	24357604	intron,intron	bs +,CR44811 -	chr2R	24361816	intron,intron	bs +,CR44811 -	chr2R_10_24355001	chr2R_24355001	RAL-409_125b
1294	chr2R	24647537	24647575	chr2R	24655153	24655182	412	5	7614	4.5	6.0	5.2	0.8	7645	chr2R	24647537	intergenic	not near genes	chr2R	24651360	intergenic	not near genes	chr2R	24655182	intergenic	not near genes	chr2R_5_24650001	chr2R_24650001	RAL-409_125b
1295	chr2R	24727853	24727893	chr2R	24735401	24735428	mdg1	10	7540	4.5	5.5	5.0	1.7	7575	chr2R	24727853	intron	Mid1 -	chr2R	24731640	intron	Mid1 -	chr2R	24735428	intron	Mid1 -	chr2R_10_24730001	chr2R_24730001	RAL-409_125b
1296	chr2R	24763580	24763644	chr2R	24765595	24765635	G2	12	2002	4.5	6.0	5.2	1.9	2055	chr2R	24763580	exon	CG3894 +	chr2R	24764608	intron	CG3894 +	chr2R	24765635	exon	CG3894 +	chr2R_12_24760001	chr2R_24760001	RAL-409_125b
1309	chr2R	25141626	25141677	chr2R	25159346	25159417	roo	14	17732	4.0	9.0	6.5	1.9	17791	chr2R	25141626	intergenic	not near genes	chr2R	25150522	intergenic	not near genes	chr2R	25159417	intergenic	not near genes	chr2R_14_25150001	chr2R_25150001	RAL-409_125b
1316	chr3L	110172	110210	chr3L	119389	119427	roo	10	9215	6.5	5.0	5.8	1.5	9255	chr3L	110172	intergenic	not near genes	chr3L	114800	intergenic	not near genes	chr3L	119427	intergenic	not near genes	chr3L_10_110001	chr3L_110001	RAL-409_125b
1317	chr3L	110214	110242	chr3L	119385	119393	roo	11	9205	5.0	5.0	5.0	1.8	9179	chr3L	110214	intergenic	not near genes	chr3L	114804	intergenic	not near genes	chr3L	119393	intergenic	not near genes	chr3L_11_110001	chr3L_110001	RAL-409_125b
1323	chr3L	402670	402708	chr3L	409742	409811	297	14	7088	6.5	7.0	6.8	1.8	7141	chr3L	402670	intergenic	not near genes	chr3L	406240	intergenic	not near genes	chr3L	409811	intergenic	not near genes	chr3L_14_405001	chr3L_405001	RAL-409_125b
1338	chr3L	789862	789938	chr3L	790397	790474	roo	10	533	0.0	1.0	0.5	6.7	612	chr3L	789862	intergenic	not near genes	chr3L	790168	intergenic	not near genes	chr3L	790474	intergenic	not near genes	chr3L_10_790001	chr3L_790001	RAL-409_125b
1340	chr3L	857967	858019	chr3L	866482	866519	Tirant	12	8505	3.0	3.0	3.0	3.0	8552	chr3L	857967	intergenic	not near genes	chr3L	862243	intergenic	not near genes	chr3L	866519	5` UTR	CG12502 +	chr3L_12_860001	chr3L_860001	RAL-409_125b
1343	chr3L	925137	925198	chr3L	932613	932674	mdg1	18	7474	3.0	3.5	3.2	4.3	7537	chr3L	925137	intron	Glut1 +	chr3L	928906	intron	Glut1 +	chr3L	932674	intron	Glut1 +	chr3L_18_925001	chr3L_925001	RAL-409_125b
1344	chr3L	939731	939789	chr3L	940902	940948	jockey	12	1166	4.0	5.5	4.8	2.1	1217	chr3L	939731	intron	Glut1 +	chr3L	940340	intron	Glut1 +	chr3L	940948	intron	Glut1 +	chr3L_12_940001	chr3L_940001	RAL-409_125b
1348	chr3L	1047330	1047385	chr3L	1055178	1055223	412	6	7841	2.5	7.5	5.0	1.0	7893	chr3L	1047330	intron	bab1 -	chr3L	1051276	intron	bab1 -	chr3L	1055223	intron	bab1 -	chr3L_6_1050001	chr3L_1050001	RAL-409_125b
1349	chr3L	1154076	1154157	chr3L	1163279	1163357	roo	11	9200	7.5	3.0	5.2	1.8	9281	chr3L	1154076	intron	bab2 -	chr3L	1158716	intron	bab2 -	chr3L	1163357	intron	bab2 -	chr3L_11_1155001	chr3L_1155001	RAL-409_125b
1351	chr3L	1219571	1219591	chr3L	1227329	1227337	412	5	7765	7.5	4.5	6.0	0.7	7766	chr3L	1219571	intron	mwh +	chr3L	1223454	intron	mwh +	chr3L	1227337	intron	mwh +	chr3L_5_1220001	chr3L_1220001	RAL-409_125b
1352	chr3L	1219592	1219602	chr3L	1227328	1227385	412	6	7764	6.5	4.5	5.5	0.9	7793	chr3L	1219592	intron	mwh +	chr3L	1223488	intron	mwh +	chr3L	1227385	intron	mwh +	chr3L_6_1220001	chr3L_1220001	RAL-409_125b
1359	chr3L	1424761	1424764	chr3L	1430039	1430060	Rt1a	5	5293	0.0	5.5	2.8	1.3	5299	chr3L	1424761	intron	Ptp61F -	chr3L	1427410	intron	Ptp61F -	chr3L	1430060	intron	Ptp61F -	chr3L_5_1425001	chr3L_1425001	RAL-409_125b
1360	chr3L	1485700	1485726	chr3L	1486915	1486947	1360	5	1217	5.5	10.5	8.0	0.6	1247	chr3L	1485700	intron	stet -	chr3L	1486324	intron	stet -	chr3L	1486947	intron	stet -	chr3L_5_1485001	chr3L_1485001	RAL-409_125b
1361	chr3L	1485728	1485738	chr3L	1486914	1486928	1360	6	1209	3.0	10.0	6.5	0.8	1200	chr3L	1485728	intron	stet -	chr3L	1486328	intron	stet -	chr3L	1486928	intron	stet -	chr3L_6_1485001	chr3L_1485001	RAL-409_125b
1362	chr3L	1505960	1505969	chr3L	1513607	1513616	17.6	4	7647	13.0	5.5	9.2	0.4	7656	chr3L	1505960	intron,intron	Psa +,cue -	chr3L	1509788	intron,intron	Psa +,cue -	chr3L	1513616	intron,intron	Psa +,cue -	chr3L_4_1505001	chr3L_1505001	RAL-409_125b
1363	chr3L	1505973	1506020	chr3L	1513599	1513667	17.6	20	7643	4.5	5.0	4.8	3.4	7694	chr3L	1505973	intron,intron	Psa +,cue -	chr3L	1509820	intron,intron	Psa +,cue -	chr3L	1513667	intron,intron	Psa +,cue -	chr3L_20_1505001	chr3L_1505001	RAL-409_125b
1369	chr3L	1740807	1740884	chr3L	1741102	1741134	pogo	17	286	5.0	9.0	7.0	2.1	327	chr3L	1740807	intron	Gk +	chr3L	1740970	intron	Gk +	chr3L	1741134	intron	Gk +	chr3L_17_1740001	chr3L_1740001	RAL-409_125b
1376	chr3L	2108208	2108271	chr3L	2113460	2113525	copia	16	5252	5.0	8.0	6.5	2.1	5317	chr3L	2108208	intron	sls -	chr3L	2110866	intron	sls -	chr3L	2113525	intron	sls -	chr3L_16_2110001	chr3L_2110001	RAL-409_125b
1388	chr3L	2447463	2447529	chr3L	2456669	2456730	roo	16	9200	6.0	4.5	5.2	2.6	9267	chr3L	2447463	intron	CG45186 +	chr3L	2452096	intron	CG45186 +	chr3L	2456730	intron	CG45186 +	chr3L_16_2450001	chr3L_2450001	RAL-409_125b
1401	chr3L	2751424	2751453	chr3L	2755769	2755798	F-element	8	4343	9.0	7.5	8.2	0.9	4374	chr3L	2751424	intron	Mrtf -	chr3L	2753611	intron	Mrtf -	chr3L	2755798	intron	Mrtf -	chr3L_8_2750001	chr3L_2750001	RAL-409_125b
1407	chr3L	2927799	2927870	chr3L	2936126	2936176	Tirant	17	8323	3.5	5.5	4.5	3.1	8377	chr3L	2927799	intron	Shab +	chr3L	2931988	intron	Shab +	chr3L	2936176	intron	Shab +	chr3L_17_2930001	chr3L_2930001	RAL-409_125b
1408	chr3L	2966683	2966725	chr3L	2974160	2974205	mdg1	4	7478	4.0	0.0	2.0	1.3	7522	chr3L	2966683	intergenic	not near genes	chr3L	2970444	intergenic	not near genes	chr3L	2974205	intergenic	not near genes	chr3L_4_2970001	chr3L_2970001	RAL-409_125b
1412	chr3L	3040282	3040352	chr3L	3042115	3042195	S-element	7	1840	2.0	0.5	1.2	3.2	1913	chr3L	3040282	3` UTR	CG2162 +	chr3L	3041238	intergenic	not near genes	chr3L	3042195	intergenic	Jafrac2 +	chr3L_7_3040001	chr3L_3040001	RAL-409_125b
1414	chr3L	3051707	3051733	chr3L	3051988	3052028	pogo	6	290	8.5	4.0	6.2	0.8	321	chr3L	3051707	3` UTR	CG32485 +	chr3L	3051868	intergenic	CG32485 +	chr3L	3052028	intergenic	CG32485 +,CG1271 +	chr3L_6_3050001	chr3L_3050001	RAL-409_125b
1415	chr3L	3061249	3061307	chr3L	3069871	3069891	Tirant	10	8614	2.5	4.0	3.2	2.4	8642	chr3L	3061249	intron	CG32486 -	chr3L	3065570	intron	CG32486 -	chr3L	3069891	intron	CG32486 -	chr3L_10_3065001	chr3L_3065001	RAL-409_125b
1419	chr3L	3281431	3281469	chr3L	3281938	3282014	Doc	8	518	5.0	7.0	6.0	1.1	583	chr3L	3281431	intron	CG12017 +	chr3L	3281722	intron	CG12017 +	chr3L	3282014	intron	CG12017 +	chr3L_8_3280001	chr3L_3280001	RAL-409_125b
1425	chr3L	3475039	3475094	chr3L	3475533	3475563	jockey	11	484	4.5	4.0	4.2	2.1	524	chr3L	3475039	intron	CG42324 +	chr3L	3475301	intron	CG42324 +	chr3L	3475563	intron	CG42324 +	chr3L_11_3475001	chr3L_3475001	RAL-409_125b
1431	chr3L	3601259	3601329	chr3L	3606620	3606685	copia	19	5359	2.0	7.5	4.8	3.3	5426	chr3L	3601259	intron	Eip63E +	chr3L	3603972	intron	Eip63E +	chr3L	3606685	intron	Eip63E +	chr3L_19_3600001	chr3L_3600001	RAL-409_125b
1438	chr3L	3833703	3833719	chr3L	3833994	3834010	pogo	4	290	9.5	7.5	8.5	0.4	307	chr3L	3833703	intron	enc +	chr3L	3833856	intron	enc +	chr3L	3834010	intron	enc +	chr3L_4_3830001	chr3L_3830001	RAL-409_125b
1448	chr3L	4328695	4328746	chr3L	4336243	4336294	412	12	7546	5.0	6.5	5.8	1.8	7599	chr3L	4328695	intron	Cip4 -	chr3L	4332494	intron	Cip4 -	chr3L	4336294	exon	Cip4 -	chr3L_12_4330001	chr3L_4330001	RAL-409_125b
1461	chr3L	4901096	4901128	chr3L	4907336	4907368	diver	11	6238	9.0	10.5	9.8	1.0	6272	chr3L	4901096	intergenic	CG13704 +	chr3L	4904232	intergenic	not near genes	chr3L	4907368	intergenic	not near genes	chr3L_11_4900001	chr3L_4900001	RAL-409_125b
1465	chr3L	5034118	5034178	chr3L	5043320	5043373	roo	8	9199	5.0	3.5	4.2	1.5	9255	chr3L	5034118	intron	Con -	chr3L	5038746	intron	Con -	chr3L	5043373	intron	Con -	chr3L_8_5035001	chr3L_5035001	RAL-409_125b
1466	chr3L	5045419	5045484	chr3L	5050250	5050315	Doc	7	4831	5.0	3.0	4.0	1.4	4896	chr3L	5045419	5` UTR	Con -	chr3L	5047867	intron	Con -	chr3L	5050315	intron	Con -	chr3L_7_5045001	chr3L_5045001	RAL-409_125b
1480	chr3L	5537681	5537744	chr3L	5538073	5538130	jockey	16	383	5.0	6.0	5.5	2.5	449	chr3L	5537681	intergenic	not near genes	chr3L	5537906	intergenic	not near genes	chr3L	5538130	intergenic	CG10625 -	chr3L_16_5535001	chr3L_5535001	RAL-409_125b
1485	chr3L	5909988	5910052	chr3L	5910279	5910343	pogo	14	290	7.0	5.0	6.0	2.0	355	chr3L	5909988	intron	CG13288 +	chr3L	5910166	intron	CG13288 +	chr3L	5910343	intron	CG13288 +	chr3L_14_5910001	chr3L_5910001	RAL-409_125b
1486	chr3L	5926276	5926347	chr3L	5926508	5926588	BS	9	230	3.5	6.5	5.0	1.5	312	chr3L	5926276	intron	Vap-33B +	chr3L	5926432	intron	Vap-33B +	chr3L	5926588	intron	Vap-33B +	chr3L_9_5925001	chr3L_5925001	RAL-409_125b
1490	chr3L	6001644	6001716	chr3L	6004387	6004466	jockey	15	2748	6.5	0.5	3.5	3.3	2822	chr3L	6001644	intron	PVRAP +	chr3L	6003055	intron	PVRAP +	chr3L	6004466	intron	PVRAP +	chr3L_15_6000001	chr3L_6000001	RAL-409_125b
1491	chr3L	6040317	6040380	chr3L	6042723	6042776	Doc	16	2403	10.5	3.5	7.0	2.0	2459	chr3L	6040317	intergenic	Jon65Aiv +	chr3L	6041546	intergenic	not near genes	chr3L	6042776	intergenic	not near genes	chr3L_16_6040001	chr3L_6040001	RAL-409_125b
1499	chr3L	6220869	6220936	chr3L	6230071	6230138	roo	14	9197	9.0	5.5	7.2	1.7	9269	chr3L	6220869	5` UTR	pncr008:3L +	chr3L	6225504	intergenic	not near genes	chr3L	6230138	intergenic	not near genes	chr3L_14_6225001	chr3L_6225001	RAL-409_125b
1502	chr3L	6334969	6335034	chr3L	6335480	6335555	297	18	520	6.0	4.0	5.0	3.0	586	chr3L	6334969	intron	CG13300 -	chr3L	6335262	intron	CG13300 -	chr3L	6335555	intron	CG13300 -	chr3L_18_6335001	chr3L_6335001	RAL-409_125b
1504	chr3L	6405619	6405685	chr3L	6432128	6432162	roo	17	26510	1.5	5.0	3.2	4.0	26543	chr3L	6405619	intron	CG42747 +	chr3L	6418890	intron	CG42747 +	chr3L	6432162	intron	CG42747 +	chr3L_17_6415001	chr3L_6415001	RAL-409_125b
1508	chr3L	6620570	6620599	chr3L	6621055	6621082	Rt1c	10	486	4.5	10.5	7.5	1.2	512	chr3L	6620570	intergenic	not near genes	chr3L	6620826	intergenic	not near genes	chr3L	6621082	intergenic	not near genes	chr3L_10_6620001	chr3L_6620001	RAL-409_125b
1511	chr3L	6781083	6781148	chr3L	6783146	6783208	Doc	9	2061	7.0	0.0	3.5	2.0	2125	chr3L	6781083	intergenic	not near genes	chr3L	6782146	intergenic	not near genes	chr3L	6783208	intergenic	not near genes	chr3L_9_6780001	chr3L_6780001	RAL-409_125b
1516	chr3L	6855883	6855941	chr3L	6860717	6860760	Doc	11	4823	4.5	3.0	3.8	2.3	4877	chr3L	6855883	intergenic	not near genes	chr3L	6858322	intergenic	not near genes	chr3L	6860760	intergenic	not near genes	chr3L_11_6855001	chr3L_6855001	RAL-409_125b
1517	chr3L	6887476	6887537	chr3L	6895018	6895079	roo	19	7540	4.5	4.0	4.2	3.7	7603	chr3L	6887476	intergenic	not near genes	chr3L	6891278	intergenic	not near genes	chr3L	6895079	intergenic	not near genes	chr3L_19_6890001	chr3L_6890001	RAL-409_125b
1524	chr3L	7129908	7129934	chr3L	7130150	7130166	BS	9	241	0.5	4.5	2.5	2.6	258	chr3L	7129908	intergenic	CG15829 +	chr3L	7130037	intergenic	CG15829 +	chr3L	7130166	intergenic	CG15829 +	chr3L_9_7130001	chr3L_7130001	RAL-409_125b
1527	chr3L	7377285	7377341	chr3L	7380429	7380496	297	12	3153	4.0	6.0	5.0	2.0	3211	chr3L	7377285	intron	SMSr -	chr3L	7378890	intron	SMSr -	chr3L	7380496	intron	SMSr -	chr3L_12_7375001	chr3L_7375001	RAL-409_125b
1528	chr3L	7498749	7498764	chr3L	7503544	7503560	F-element	5	4814	5.5	6.0	5.8	0.7	4811	chr3L	7498749	5` UTR	CG8539 -	chr3L	7501154	intergenic	not near genes	chr3L	7503560	intergenic	not near genes	chr3L_5_7500001	chr3L_7500001	RAL-409_125b
1535	chr3L	7793697	7793733	chr3L	7800799	7800835	297	11	7101	4.5	9.5	7.0	1.4	7138	chr3L	7793697	intron	CG32369 -	chr3L	7797266	intron	CG32369 -	chr3L	7800835	intron	CG32369 -	chr3L_11_7795001	chr3L_7795001	RAL-409_125b
1539	chr3L	7886488	7886541	chr3L	7889045	7889103	Stalker4	18	2563	4.0	4.0	4.0	3.6	2615	chr3L	7886488	intron	CG32365 +	chr3L	7887796	intron	CG32365 +	chr3L	7889103	intron	CG32365 +	chr3L_18_7885001	chr3L_7885001	RAL-409_125b
1541	chr3L	7916791	7916844	chr3L	7926012	7926065	roo	12	9220	7.0	4.0	5.5	1.8	9274	chr3L	7916791	3` UTR	syd -	chr3L	7921428	intron	syd -	chr3L	7926065	3` UTR	syd -	chr3L_12_7920001	chr3L_7920001	RAL-409_125b
1542	chr3L	7985332	7985386	chr3L	7987699	7987764	NOF	10	2376	6.0	5.5	5.8	1.5	2432	chr3L	7985332	intron	nmo +	chr3L	7986548	intron	nmo +	chr3L	7987764	intron	nmo +	chr3L_10_7985001	chr3L_7985001	RAL-409_125b
1545	chr3L	8019675	8019732	chr3L	8024128	8024132	NOF	13	4447	2.5	4.0	3.2	3.1	4457	chr3L	8019675	intron	nmo +	chr3L	8021904	intron	nmo +	chr3L	8024132	intron	nmo +	chr3L_13_8020001	chr3L_8020001	RAL-409_125b
1552	chr3L	8233494	8233568	chr3L	8238986	8239060	Rt1a	7	5488	1.0	3.5	2.2	2.2	5566	chr3L	8233494	intron	CG7213 -	chr3L	8236277	intron	CG7213 -	chr3L	8239060	intron,intron	CG7213 -,Dscam4 +	chr3L_7_8235001	chr3L_8235001	RAL-409_125b
1557	chr3L	8481759	8481791	chr3L	8490959	8490989	roo	7	9192	6.5	9.5	8.0	0.8	9230	chr3L	8481759	intron	CG43163 -	chr3L	8486374	intron	CG43163 -	chr3L	8490989	intron	CG43163 -	chr3L_7_8485001	chr3L_8485001	RAL-409_125b
1558	chr3L	8481793	8481797	chr3L	8490955	8491001	roo	5	9191	6.0	9.0	7.5	0.6	9208	chr3L	8481793	intron	CG43163 -	chr3L	8486397	intron	CG43163 -	chr3L	8491001	intron	CG43163 -	chr3L_5_8485001	chr3L_8485001	RAL-409_125b
1559	chr3L	8498264	8498323	chr3L	8505776	8505838	blood	21	7514	5.0	6.0	5.5	3.2	7574	chr3L	8498264	intron	CG43163 -	chr3L	8502051	intron	CG43163 -	chr3L	8505838	intron	CG43163 -	chr3L_21_8500001	chr3L_8500001	RAL-409_125b
1565	chr3L	8791239	8791302	chr3L	8796698	8796771	I-element	10	5463	3.0	0.0	1.5	4.0	5532	chr3L	8791239	exon	Fhos +	chr3L	8794005	intron	Fhos +	chr3L	8796771	intron	Fhos +	chr3L_10_8790001	chr3L_8790001	RAL-409_125b
1578	chr3L	9076899	9076957	chr3L	9084495	9084512	412	16	7600	3.0	7.0	5.0	2.7	7613	chr3L	9076899	exon	Tequila +	chr3L	9080706	intron	Tequila +	chr3L	9084512	exon	Tequila +	chr3L_16_9080001	chr3L_9080001	RAL-409_125b
1580	chr3L	9130514	9130575	chr3L	9134320	9134363	412	12	3799	6.0	8.0	7.0	1.5	3849	chr3L	9130514	intergenic	bol -	chr3L	9132438	intergenic	not near genes	chr3L	9134363	intergenic	Dhpr +	chr3L_12_9130001	chr3L_9130001	RAL-409_125b
1581	chr3L	9164661	9164680	chr3L	9166176	9166187	hobo	4	1512	10.5	0.0	5.2	0.6	1526	chr3L	9164661	intron	Rdl -	chr3L	9165424	intron	Rdl -	chr3L	9166187	intron	Rdl -	chr3L_4_9165001	chr3L_9165001	RAL-409_125b
1583	chr3L	9219227	9219269	chr3L	9219929	9219961	jockey	16	710	11.5	6.0	8.8	1.6	734	chr3L	9219227	intergenic	not near genes	chr3L	9219594	intergenic	not near genes	chr3L	9219961	intergenic	not near genes	chr3L_16_9215001	chr3L_9215001	RAL-409_125b
1584	chr3L	9270576	9270632	chr3L	9278381	9278401	roo	6	7797	5.5	3.5	4.5	1.1	7825	chr3L	9270576	intron	GluRIB +	chr3L	9274488	intron	GluRIB +	chr3L	9278401	exon	GluRIB +	chr3L_6_9270001	chr3L_9270001	RAL-409_125b
1588	chr3L	9443491	9443528	chr3L	9445327	9445364	S-element	7	1834	1.5	6.5	4.0	1.4	1873	chr3L	9443491	intron	CG33926 +	chr3L	9444428	intron	CG33926 +	chr3L	9445364	intron	CG33926 +	chr3L_7_9440001	chr3L_9440001	RAL-409_125b
1589	chr3L	9501679	9501732	chr3L	9502187	9502265	roo	12	530	3.5	2.5	3.0	3.0	586	chr3L	9501679	intron	path -	chr3L	9501972	intron	path -	chr3L	9502265	intron	path -	chr3L_12_9500001	chr3L_9500001	RAL-409_125b
1594	chr3L	9533754	9533784	chr3L	9541313	9541339	412	7	7582	4.5	3.0	3.8	1.5	7585	chr3L	9533754	intergenic	not near genes	chr3L	9537546	intergenic	not near genes	chr3L	9541339	intergenic	not near genes	chr3L_7_9535001	chr3L_9535001	RAL-409_125b
1596	chr3L	9571886	9571890	chr3L	9572275	9572288	jockey	5	393	11.5	7.0	9.2	0.5	402	chr3L	9571886	intron	CG42673 +	chr3L	9572087	intron	CG42673 +	chr3L	9572288	intron	CG42673 +	chr3L_5_9570001	chr3L_9570001	RAL-409_125b
1597	chr3L	9571893	9571911	chr3L	9572271	9572309	jockey	7	394	9.5	6.5	8.0	0.8	416	chr3L	9571893	intron	CG42673 +	chr3L	9572101	intron	CG42673 +	chr3L	9572309	intron	CG42673 +	chr3L_7_9570001	chr3L_9570001	RAL-409_125b
1598	chr3L	9575894	9575929	chr3L	9581016	9581055	jockey	4	5126	9.5	9.0	9.2	0.4	5161	chr3L	9575894	intron	CG42673 +	chr3L	9578474	intron	CG42673 +	chr3L	9581055	intron	CG42673 +	chr3L_4_9575001	chr3L_9575001	RAL-409_125b
1609	chr3L	9929638	9929691	chr3L	9938467	9938504	roo	16	8823	7.5	8.0	7.8	1.8	8866	chr3L	9929638	intron	CG34356 +	chr3L	9934071	intron	CG34356 +	chr3L	9938504	intron	CG34356 +	chr3L_16_9930001	chr3L_9930001	RAL-409_125b
1615	chr3L	10060085	10060112	chr3L	10067704	10067741	17.6	6	7627	11.5	14.5	13.0	0.4	7656	chr3L	10060085	intron	dpr6 +	chr3L	10063913	intron	dpr6 +	chr3L	10067741	intron	dpr6 +	chr3L_6_10060001	chr3L_10060001	RAL-409_125b
1625	chr3L	10414912	10414957	chr3L	10417334	10417379	Doc	21	2418	8.0	6.0	7.0	2.6	2467	chr3L	10414912	intergenic	CG12362 +	chr3L	10416146	intergenic	not near genes	chr3L	10417379	intergenic	not near genes	chr3L_21_10415001	chr3L_10415001	RAL-409_125b
1646	chr3L	11086997	11087087	chr3L	11088849	11088926	S-element	12	1834	0.0	5.5	2.8	3.2	1929	chr3L	11086997	intron	JIL-1 -	chr3L	11087962	intron	JIL-1 -	chr3L	11088926	intron	JIL-1 -	chr3L_12_11085001	chr3L_11085001	RAL-409_125b
1648	chr3L	11105254	11105311	chr3L	11107010	11107066	X-element	6	1757	5.5	5.0	5.2	1.0	1812	chr3L	11105254	intergenic	not near genes	chr3L	11106160	intergenic	not near genes	chr3L	11107066	exon	CG32073 -	chr3L_6_11105001	chr3L_11105001	RAL-409_125b
1654	chr3L	11264442	11264484	chr3L	11271419	11271486	17.6	12	6995	3.5	5.0	4.2	2.3	7044	chr3L	11264442	intergenic	not near genes	chr3L	11267964	intergenic	not near genes	chr3L	11271486	intergenic	not near genes	chr3L_12_11265001	chr3L_11265001	RAL-409_125b
1655	chr3L	11277445	11277459	chr3L	11278475	11278498	Rt1a	5	1033	1.5	7.0	4.2	1.0	1053	chr3L	11277445	intergenic	not near genes	chr3L	11277972	intergenic	not near genes	chr3L	11278498	intergenic	not near genes	chr3L_5_11275001	chr3L_11275001	RAL-409_125b
1659	chr3L	11329662	11329723	chr3L	11332917	11332978	jockey	10	3249	5.5	8.0	6.8	1.3	3316	chr3L	11329662	intergenic	not near genes	chr3L	11331320	intergenic	not near genes	chr3L	11332978	intergenic	not near genes	chr3L_10_11330001	chr3L_11330001	RAL-409_125b
1668	chr3L	11723073	11723108	chr3L	11727908	11727943	Doc	11	4841	6.5	12.5	9.5	1.0	4870	chr3L	11723073	3` UTR	Bmcp +	chr3L	11725508	intron	Bmcp +	chr3L	11727943	3` UTR	Bmcp +	chr3L_11_11725001	chr3L_11725001	RAL-409_125b
1677	chr3L	11864516	11864580	chr3L	11865856	11865915	pogo	14	1342	4.5	8.0	6.2	1.9	1399	chr3L	11864516	intron	CG44837 -	chr3L	11865216	intron	CG44837 -	chr3L	11865915	intron	CG44837 -	chr3L_14_11865001	chr3L_11865001	RAL-409_125b
1718	chr3L	12874886	12874953	chr3L	12877228	12877285	jockey	20	2339	3.0	5.0	4.0	4.0	2399	chr3L	12874886	intergenic	not near genes	chr3L	12876086	intergenic	not near genes	chr3L	12877285	intergenic	not near genes	chr3L_20_12875001	chr3L_12875001	RAL-409_125b
1720	chr3L	12919260	12919310	chr3L	12924761	12924837	Rt1c	4	5514	3.0	4.5	3.8	0.8	5577	chr3L	12919260	intergenic	not near genes	chr3L	12922048	intergenic	not near genes	chr3L	12924837	intergenic	not near genes	chr3L_4_12920001	chr3L_12920001	RAL-409_125b
1722	chr3L	12957741	12957816	chr3L	12962273	12962320	copia	15	4523	3.5	5.0	4.2	2.9	4579	chr3L	12957741	intergenic	not near genes	chr3L	12960030	intergenic	not near genes	chr3L	12962320	intergenic	not near genes	chr3L_15_12960001	chr3L_12960001	RAL-409_125b
1744	chr3L	13525119	13525179	chr3L	13532965	13533018	roo	9	7844	9.5	11.0	10.2	0.8	7899	chr3L	13525119	intergenic	not near genes	chr3L	13529068	intergenic	not near genes	chr3L	13533018	intergenic	not near genes	chr3L_9_13525001	chr3L_13525001	RAL-409_125b
1748	chr3L	13804507	13804573	chr3L	13822843	13822857	roo	16	18331	6.5	9.0	7.8	1.8	18350	chr3L	13804507	intergenic	not near genes	chr3L	13813682	intergenic	not near genes	chr3L	13822857	intergenic	not near genes	chr3L_16_13810001	chr3L_13810001	RAL-409_125b
1763	chr3L	14245530	14245577	chr3L	14245674	14245716	1360	9	139	7.0	7.0	7.0	1.1	186	chr3L	14245530	3` UTR	CR44561 -	chr3L	14245623	3` UTR	CR44561 -	chr3L	14245716	intergenic	CR44561 -,CR44560 +	chr3L_9_14245001	chr3L_14245001	RAL-409_125b
1764	chr3L	14267379	14267402	chr3L	14271836	14271864	F-element	5	4459	5.0	0.0	2.5	1.4	4485	chr3L	14267379	intergenic	not near genes	chr3L	14269622	intergenic	not near genes	chr3L	14271864	intergenic	not near genes	chr3L_5_14265001	chr3L_14265001	RAL-409_125b
1766	chr3L	14295948	14296003	chr3L	14296473	14296539	roo	9	530	6.0	6.0	6.0	1.3	591	chr3L	14295948	intron	fz +	chr3L	14296244	intron	fz +	chr3L	14296539	intron	fz +	chr3L_9_14295001	chr3L_14295001	RAL-409_125b
1767	chr3L	14312002	14312024	chr3L	14316840	14316847	X-element	4	4837	5.0	4.5	4.8	0.7	4845	chr3L	14312002	exon	fz +	chr3L	14314424	intron	fz +	chr3L	14316847	intron	fz +	chr3L_4_14310001	chr3L_14310001	RAL-409_125b
1776	chr3L	14468416	14468471	chr3L	14473672	14473727	copia	12	5254	6.0	7.0	6.5	1.6	5311	chr3L	14468416	intron	bbg -	chr3L	14471072	intron	bbg -	chr3L	14473727	intron	bbg -	chr3L_12_14470001	chr3L_14470001	RAL-409_125b
1787	chr3L	14721197	14721204	chr3L	14723044	14723075	Rt1c	4	1872	4.0	6.5	5.2	0.6	1878	chr3L	14721197	intron	ome +	chr3L	14722136	intron	ome +	chr3L	14723075	intron	ome +	chr3L_4_14720001	chr3L_14720001	RAL-409_125b
1788	chr3L	14725532	14725615	chr3L	14728588	14728659	Doc	12	3049	0.0	6.0	3.0	3.0	3127	chr3L	14725532	intron	ome +	chr3L	14727096	intron	ome +	chr3L	14728659	intron	ome +	chr3L_12_14725001	chr3L_14725001	RAL-409_125b
1799	chr3L	14970719	14970763	chr3L	14971079	14971123	F-element	6	359	3.5	0.5	2.0	2.0	404	chr3L	14970719	intergenic	Tom +	chr3L	14970921	intergenic	not near genes	chr3L	14971123	intergenic	not near genes	chr3L_6_14970001	chr3L_14970001	RAL-409_125b
1800	chr3L	15056690	15056702	chr3L	15056904	15056916	Transib-N1_DM	4	212	1.0	5.0	3.0	1.0	226	chr3L	15056690	intron	Sytbeta -	chr3L	15056803	intron	Sytbeta -	chr3L	15056916	intron	Sytbeta -	chr3L_4_15055001	chr3L_15055001	RAL-409_125b
1801	chr3L	15085013	15085078	chr3L	15086224	15086258	1360	16	1209	9.5	7.0	8.2	1.7	1245	chr3L	15085013	intron	cp309 -	chr3L	15085636	intron	cp309 -	chr3L	15086258	intron	cp309 -	chr3L_16_15085001	chr3L_15085001	RAL-409_125b
1813	chr3L	15423715	15423778	chr3L	15426609	15426672	opus	12	2892	6.0	2.5	4.2	2.3	2957	chr3L	15423715	intergenic	not near genes	chr3L	15425194	intergenic	not near genes	chr3L	15426672	intergenic	not near genes	chr3L_12_15425001	chr3L_15425001	RAL-409_125b
1842	chr3L	15899243	15899263	chr3L	15899790	15899822	jockey	8	582	2.5	3.5	3.0	2.0	579	chr3L	15899243	intergenic	pHCl -	chr3L	15899532	intergenic	not near genes	chr3L	15899822	intergenic	sff -	chr3L_8_15895001	chr3L_15895001	RAL-409_125b
1845	chr3L	15929162	15929219	chr3L	15938359	15938416	roo	11	9196	7.5	6.0	6.8	1.4	9254	chr3L	15929162	intron	Pka-C3 -	chr3L	15933789	intron	Pka-C3 -	chr3L	15938416	intron	Pka-C3 -	chr3L_11_15930001	chr3L_15930001	RAL-409_125b
1853	chr3L	16184068	16184128	chr3L	16188937	16188997	X-element	12	4863	5.5	5.0	5.2	1.9	4929	chr3L	16184068	intergenic	not near genes	chr3L	16186532	intergenic	not near genes	chr3L	16188997	intergenic	not near genes	chr3L_12_16185001	chr3L_16185001	RAL-409_125b
1863	chr3L	16443801	16443873	chr3L	16446192	16446263	Doc	9	2388	4.0	7.5	5.8	1.3	2462	chr3L	16443801	intron,intron	CG33158 +,dsx-c73A -	chr3L	16445032	intron,intron	CG33158 +,dsx-c73A -	chr3L	16446263	intron,intron	CG33158 +,dsx-c73A -	chr3L_9_16445001	chr3L_16445001	RAL-409_125b
1868	chr3L	16493939	16494002	chr3L	16494506	16494569	jockey	17	562	7.5	9.0	8.2	1.8	630	chr3L	16493939	intron,exon,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494254	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494569	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L_17_16490001	chr3L_16490001	RAL-409_125b
1872	chr3L	16616472	16616535	chr3L	16621843	16621913	297	15	5372	6.0	6.0	6.0	2.1	5441	chr3L	16616472	3` UTR	Abl -	chr3L	16619192	3` UTR	Abl -	chr3L	16621913	3` UTR	Abl -	chr3L_15_16615001	chr3L_16615001	RAL-409_125b
1875	chr3L	16683984	16684037	chr3L	16689255	16689308	copia	4	5270	4.0	3.0	3.5	0.9	5324	chr3L	16683984	intron,intron	Lasp -,CG43954 -	chr3L	16686646	intron,intron	Lasp -,CG43954 -	chr3L	16689308	intron,intron,5` UTR	Lasp -,CG43954 -,CR45179 +	chr3L_4_16685001	chr3L_16685001	RAL-409_125b
1890	chr3L	16945710	16945720	chr3L	16954893	16954918	roo	4	9187	6.5	7.5	7.0	0.5	9208	chr3L	16945710	exon	Obp73a +	chr3L	16950314	intergenic	not near genes	chr3L	16954918	5` UTR	Nc73EF +	chr3L_4_16950001	chr3L_16950001	RAL-409_125b
1891	chr3L	16945723	16945754	chr3L	16954891	16954901	roo	7	9174	4.0	7.5	5.8	1.0	9178	chr3L	16945723	exon	Obp73a +	chr3L	16950312	intergenic	not near genes	chr3L	16954901	5` UTR	Nc73EF +	chr3L_7_16950001	chr3L_16950001	RAL-409_125b
1893	chr3L	17034914	17034944	chr3L	17035136	17035176	G2	7	234	3.5	5.0	4.2	1.3	262	chr3L	17034914	intergenic	not near genes	chr3L	17035045	intergenic	not near genes	chr3L	17035176	intergenic	beg +	chr3L_7_17035001	chr3L_17035001	RAL-409_125b
1894	chr3L	17084966	17085015	chr3L	17094154	17094214	roo	13	9196	8.0	7.5	7.8	1.5	9248	chr3L	17084966	intron	Rbp6 -	chr3L	17089590	intron	Rbp6 -	chr3L	17094214	intron	Rbp6 -	chr3L_13_17085001	chr3L_17085001	RAL-409_125b
1904	chr3L	17516936	17516953	chr3L	17524544	17524561	412	5	7605	12.0	6.0	9.0	0.5	7625	chr3L	17516936	intron	CG7564 +	chr3L	17520748	intron	CG7564 +	chr3L	17524561	3` UTR	CG7564 +	chr3L_5_17520001	chr3L_17520001	RAL-409_125b
1905	chr3L	17516960	17516984	chr3L	17524538	17524571	412	9	7589	8.5	5.5	7.0	1.1	7611	chr3L	17516960	intron	CG7564 +	chr3L	17520766	intron	CG7564 +	chr3L	17524571	3` UTR	CG7564 +	chr3L_9_17520001	chr3L_17520001	RAL-409_125b
1909	chr3L	17730825	17730875	chr3L	17738205	17738205	mdg1	4	7368	20.0	9.0	14.5	0.3	7380	chr3L	17730825	intron	Ccn +	chr3L	17734515	intron	Ccn +	chr3L	17738205	intron	Ccn +	chr3L_4_17730001	chr3L_17730001	RAL-409_125b
1912	chr3L	17799765	17799827	chr3L	17801602	17801652	S-element	13	1834	5.0	6.0	5.5	2.0	1887	chr3L	17799765	intron	NUCB1 -	chr3L	17800708	intron	NUCB1 -	chr3L	17801652	intron	NUCB1 -	chr3L_13_17800001	chr3L_17800001	RAL-409_125b
1915	chr3L	17918347	17918396	chr3L	17921200	17921249	opus	4	2853	2.0	7.5	4.8	0.7	2902	chr3L	17918347	intergenic	not near genes	chr3L	17919798	intergenic	not near genes	chr3L	17921249	intergenic	not near genes	chr3L_4_17915001	chr3L_17915001	RAL-409_125b
1918	chr3L	18047690	18047728	chr3L	18056797	18056835	roo	6	9105	9.0	7.5	8.2	0.7	9145	chr3L	18047690	intron	Eip75B -	chr3L	18052262	intron	Eip75B -	chr3L	18056835	intron	Eip75B -	chr3L_6_18050001	chr3L_18050001	RAL-409_125b
1940	chr3L	18506103	18506145	chr3L	18509616	18509658	F-element	6	3511	8.5	6.0	7.2	0.7	3555	chr3L	18506103	intergenic	not near genes	chr3L	18507880	intergenic	not near genes	chr3L	18509658	intergenic	not near genes	chr3L_6_18505001	chr3L_18505001	RAL-409_125b
1941	chr3L	18528608	18528651	chr3L	18537819	18537885	roo	10	9227	5.0	0.0	2.5	2.9	9277	chr3L	18528608	intergenic	not near genes	chr3L	18533246	intergenic	not near genes	chr3L	18537885	intergenic	not near genes	chr3L_10_18530001	chr3L_18530001	RAL-409_125b
1946	chr3L	18593916	18593977	chr3L	18595946	18596010	Doc	16	2030	9.0	5.5	7.2	2.0	2094	chr3L	18593916	intergenic	term -	chr3L	18594963	intergenic	not near genes	chr3L	18596010	intergenic	CR45389 +	chr3L_16_18590001	chr3L_18590001	RAL-409_125b
1950	chr3L	18710720	18710781	chr3L	18718714	18718783	Stalker2	17	7999	6.5	7.5	7.0	2.1	8063	chr3L	18710720	intergenic	not near genes	chr3L	18714752	intergenic	not near genes	chr3L	18718783	intergenic	not near genes	chr3L_17_18710001	chr3L_18710001	RAL-409_125b
1954	chr3L	18772367	18772431	chr3L	18781098	18781157	roo	14	8731	8.0	8.0	8.0	1.6	8790	chr3L	18772367	intron	ftz-f1 -	chr3L	18776762	intron	ftz-f1 -	chr3L	18781157	intron	ftz-f1 -	chr3L_14_18775001	chr3L_18775001	RAL-409_125b
1958	chr3L	18833744	18833794	chr3L	18834958	18835008	1360	11	1213	6.5	5.5	6.0	1.6	1264	chr3L	18833744	intron	Indy -	chr3L	18834376	intron	Indy -	chr3L	18835008	intron	Indy -	chr3L_11_18830001	chr3L_18830001	RAL-409_125b
1967	chr3L	19008829	19008842	chr3L	19009194	19009219	jockey	4	377	7.5	9.0	8.2	0.4	390	chr3L	19008829	intron	nkd -	chr3L	19009024	intron	nkd -	chr3L	19009219	intron	nkd -	chr3L_4_19005001	chr3L_19005001	RAL-409_125b
1970	chr3L	19115602	19115662	chr3L	19115822	19115886	BS	14	223	5.5	4.0	4.8	2.4	284	chr3L	19115602	intron	CG14082 -	chr3L	19115744	intron	CG14082 -	chr3L	19115886	intron	CG14082 -	chr3L_14_19115001	chr3L_19115001	RAL-409_125b
1971	chr3L	19117014	19117064	chr3L	19124493	19124546	mdg1	17	7482	8.0	6.5	7.2	2.1	7532	chr3L	19117014	intron	CG14082 -	chr3L	19120780	intron	CG14082 -	chr3L	19124546	intron	CG14082 -	chr3L_17_19120001	chr3L_19120001	RAL-409_125b
1974	chr3L	19208020	19208063	chr3L	19209442	19209487	Doc	6	1420	6.0	3.0	4.5	1.1	1467	chr3L	19208020	intron	fz2 -	chr3L	19208754	intron	fz2 -	chr3L	19209487	intron	fz2 -	chr3L_6_19205001	chr3L_19205001	RAL-409_125b
1975	chr3L	19208071	19208089	chr3L	19209430	19209473	Doc	5	1393	3.5	1.5	2.5	1.4	1402	chr3L	19208071	intron	fz2 -	chr3L	19208772	intron	fz2 -	chr3L	19209473	intron	fz2 -	chr3L_5_19205001	chr3L_19205001	RAL-409_125b
1989	chr3L	19820253	19820315	chr3L	19827847	19827914	412	16	7599	3.5	3.5	3.5	3.6	7661	chr3L	19820253	intron	Deaf1 +	chr3L	19824084	intron	Deaf1 +	chr3L	19827914	intron	Deaf1 +	chr3L_16_19820001	chr3L_19820001	RAL-409_125b
1990	chr3L	19848474	19848523	chr3L	19857708	19857758	roo	10	9228	4.5	5.0	4.8	1.7	9284	chr3L	19848474	intron	Papss +	chr3L	19853116	intron	Papss +	chr3L	19857758	intron	Papss +	chr3L_10_19850001	chr3L_19850001	RAL-409_125b
1991	chr3L	19861792	19861848	chr3L	19863620	19863686	S-element	7	1830	7.5	3.0	5.2	1.1	1894	chr3L	19861792	5` UTR	CR45433 +	chr3L	19862739	intergenic	not near genes	chr3L	19863686	intergenic	not near genes	chr3L_7_19860001	chr3L_19860001	RAL-409_125b
2000	chr3L	20113617	20113678	chr3L	20122924	20122985	roo	11	9306	4.0	7.5	5.8	1.6	9368	chr3L	20113617	intergenic	not near genes	chr3L	20118301	intergenic	not near genes	chr3L	20122985	intergenic	not near genes	chr3L_11_20115001	chr3L_20115001	RAL-409_125b
2003	chr3L	20212566	20212581	chr3L	20218193	20218207	mdg3	4	5627	11.5	0.0	5.8	0.6	5641	chr3L	20212566	intergenic	CG7017 -	chr3L	20215386	intergenic	not near genes	chr3L	20218207	intergenic	CG6933 -	chr3L_4_20215001	chr3L_20215001	RAL-409_125b
2005	chr3L	20257287	20257359	chr3L	20258457	20258528	pogo	16	1167	4.5	6.0	5.2	2.6	1241	chr3L	20257287	intron	rdgC +	chr3L	20257908	intron	rdgC +	chr3L	20258528	intron	rdgC +	chr3L_16_20255001	chr3L_20255001	RAL-409_125b
2011	chr3L	20476715	20476774	chr3L	20484364	20484413	springer	16	7647	4.0	9.0	6.5	2.1	7698	chr3L	20476715	3` UTR	isoQC +	chr3L	20480564	intergenic	not near genes	chr3L	20484413	3` UTR	ZnT77C -	chr3L_16_20480001	chr3L_20480001	RAL-409_125b
2012	chr3L	20487620	20487666	chr3L	20488121	20488167	INE-1	8	501	7.0	1.5	4.2	1.5	547	chr3L	20487620	intron	ZnT77C -	chr3L	20487894	intron	ZnT77C -	chr3L	20488167	exon	ZnT77C -	chr3L_8_20485001	chr3L_20485001	RAL-409_125b
2017	chr3L	20590041	20590090	chr3L	20590609	20590679	412	18	579	4.5	2.5	3.5	4.0	638	chr3L	20590041	intergenic	not near genes	chr3L	20590360	intergenic	not near genes	chr3L	20590679	intergenic	not near genes	chr3L_18_20590001	chr3L_20590001	RAL-409_125b
2021	chr3L	20821237	20821311	chr3L	20824898	20824972	NOF	14	3657	7.5	8.5	8.0	1.6	3735	chr3L	20821237	intron	Pka-R1 +	chr3L	20823104	intron	Pka-R1 +	chr3L	20824972	intron	Pka-R1 +	chr3L_14_20820001	chr3L_20820001	RAL-409_125b
2026	chr3L	21014879	21014946	chr3L	21023396	21023442	Tirant	12	8510	4.5	5.0	4.8	2.1	8563	chr3L	21014879	intron	skd -	chr3L	21019160	intron	skd -	chr3L	21023442	intron	skd -	chr3L_12_21015001	chr3L_21015001	RAL-409_125b
2027	chr3L	21151831	21151882	chr3L	21156965	21157016	flea	12	5132	6.0	6.5	6.2	1.7	5185	chr3L	21151831	intron	Ac78C -	chr3L	21154424	intron	Ac78C -	chr3L	21157016	intron	Ac78C -	chr3L_12_21150001	chr3L_21150001	RAL-409_125b
2029	chr3L	21306106	21306170	chr3L	21315315	21315378	roo	17	9205	4.5	4.5	4.5	3.1	9272	chr3L	21306106	3` UTR	CG7632 +	chr3L	21310742	intron	Pc -	chr3L	21315378	3` UTR	Pc -	chr3L_17_21310001	chr3L_21310001	RAL-409_125b
2030	chr3L	21372694	21372742	chr3L	21379252	21379300	McClintock	5	6558	6.0	9.0	7.5	0.6	6606	chr3L	21372694	intergenic	not near genes	chr3L	21375997	intergenic	not near genes	chr3L	21379300	intergenic	not near genes	chr3L_5_21375001	chr3L_21375001	RAL-409_125b
2032	chr3L	21498829	21498870	chr3L	21500480	21500495	1360	9	1661	4.0	6.5	5.2	1.5	1666	chr3L	21498829	5` UTR,intron	CR43933 +,Glg1 -	chr3L	21499662	intron	Glg1 -	chr3L	21500495	intron	Glg1 -	chr3L_9_21495001	chr3L_21495001	RAL-409_125b
2033	chr3L	21501128	21501161	chr3L	21501272	21501305	1360	4	144	6.0	13.0	9.5	0.4	177	chr3L	21501128	intron	Glg1 -	chr3L	21501216	intron	Glg1 -	chr3L	21501305	intron	Glg1 -	chr3L_4_21500001	chr3L_21500001	RAL-409_125b
2038	chr3L	21749317	21749350	chr3L	21754482	21754499	Doc	6	5170	3.5	4.0	3.8	1.2	5182	chr3L	21749317	intron	Syn1 -	chr3L	21751908	intron	Syn1 -	chr3L	21754499	intron	Syn1 -	chr3L_6_21750001	chr3L_21750001	RAL-409_125b
2046	chr3L	22099633	22099690	chr3L	22105869	22105926	3S18	14	6230	5.0	4.0	4.5	2.5	6293	chr3L	22099633	intergenic	not near genes	chr3L	22102780	intergenic	not near genes	chr3L	22105926	intergenic	not near genes	chr3L_14_22100001	chr3L_22100001	RAL-409_125b
2056	chr3L	22555735	22555798	chr3L	22563255	22563281	blood	8	7501	6.0	5.0	5.5	1.2	7546	chr3L	22555735	intergenic	not near genes	chr3L	22559508	intergenic	not near genes	chr3L	22563281	intergenic	not near genes	chr3L_8_22555001	chr3L_22555001	RAL-409_125b
2057	chr3L	22577602	22577646	chr3L	22582410	22582434	Doc	10	4827	3.0	4.5	3.8	2.1	4832	chr3L	22577602	intergenic	not near genes	chr3L	22580018	intergenic	not near genes	chr3L	22582434	3` UTR	CG14459 -	chr3L_10_22580001	chr3L_22580001	RAL-409_125b
2060	chr3L	22617147	22617166	chr3L	22624649	22624667	blood	9	7501	13.5	9.0	11.2	0.7	7520	chr3L	22617147	intron	CG14459 -	chr3L	22620907	intron	CG14459 -	chr3L	22624667	intron	CG14459 -	chr3L_9_22620001	chr3L_22620001	RAL-409_125b
2061	chr3L	22617174	22617190	chr3L	22624643	22624692	blood	7	7493	11.0	9.0	10.0	0.6	7518	chr3L	22617174	intron	CG14459 -	chr3L	22620933	intron	CG14459 -	chr3L	22624692	intron	CG14459 -	chr3L_7_22620001	chr3L_22620001	RAL-409_125b
2067	chr3L	22865948	22866004	chr3L	22867128	22867187	Doc	18	1181	8.0	7.0	7.5	2.1	1239	chr3L	22865948	exon	CG33170 +	chr3L	22866568	intron	CG33170 +	chr3L	22867187	intron	CG33170 +	chr3L_18_22865001	chr3L_22865001	RAL-409_125b
2075	chr3L	22982444	22982475	chr3L	22982876	22982920	INE-1	12	445	8.0	18.0	13.0	0.9	476	chr3L	22982444	intergenic	not near genes	chr3L	22982682	intergenic	not near genes	chr3L	22982920	intergenic	not near genes	chr3L_12_22980001	chr3L_22980001	RAL-409_125b
2076	chr3L	22989829	22989846	chr3L	22996853	22996870	297	6	7024	9.5	10.0	9.8	0.6	7041	chr3L	22989829	intergenic	not near genes	chr3L	22993350	intergenic	not near genes	chr3L	22996870	intergenic	not near genes	chr3L_6_22990001	chr3L_22990001	RAL-409_125b
2077	chr3L	22989848	22989891	chr3L	22996837	22996899	297	7	7014	4.0	4.5	4.2	1.3	7051	chr3L	22989848	intergenic	not near genes	chr3L	22993374	intergenic	not near genes	chr3L	22996899	intergenic	not near genes	chr3L_7_22990001	chr3L_22990001	RAL-409_125b
2079	chr3L	23042183	23042249	chr3L	23048986	23049010	gypsy6	7	6791	4.5	9.0	6.8	0.9	6827	chr3L	23042183	intergenic	not near genes	chr3L	23045596	intergenic	not near genes	chr3L	23049010	intergenic	not near genes	chr3L_7_23045001	chr3L_23045001	RAL-409_125b
2085	chr3L	24012371	24012420	chr3L	24020762	24020811	roo	9	8389	6.5	3.5	5.0	1.5	8440	chr3L	24012371	intergenic	not near genes	chr3L	24016591	intergenic	not near genes	chr3L	24020811	intergenic	not near genes	chr3L_9_24015001	chr3L_24015001	RAL-409_125b
2086	chr3L	24168773	24168817	chr3L	24176121	24176175	ZAM	6	7345	6.5	2.0	4.2	1.2	7402	chr3L	24168773	intron	Snap25 +	chr3L	24172474	intron	Snap25 +	chr3L	24176175	intron	Snap25 +	chr3L_6_24170001	chr3L_24170001	RAL-409_125b
2087	chr3L	24791865	24791889	chr3L	24796689	24796701	Doc	5	4823	8.0	3.5	5.8	0.7	4836	chr3L	24791865	intergenic	not near genes	chr3L	24794283	intergenic	not near genes	chr3L	24796701	intergenic	not near genes	chr3L_5_24790001	chr3L_24790001	RAL-409_125b
2091	chr3R	2446812	2446850	chr3R	2449011	2449060	1360	6	2203	47.5	33.0	40.2	0.1	2248	chr3R	2446812	intergenic	not near genes	chr3R	2447936	intergenic	not near genes	chr3R	2449060	intergenic	not near genes	chr3R_6_2445001	chr3R_2445001	RAL-409_125b
2094	chr3R	4105002	4105020	chr3R	4110256	4110272	copia	4	5250	7.0	5.0	6.0	0.6	5270	chr3R	4105002	intergenic	not near genes	chr3R	4107637	intergenic	not near genes	chr3R	4110272	intergenic	not near genes	chr3R_4_4105001	chr3R_4105001	RAL-409_125b
2096	chr3R	4206035	4206095	chr3R	4211653	4211706	mdg3	14	5622	5.5	3.5	4.5	2.5	5671	chr3R	4206035	intron	CG14636 -	chr3R	4208870	intron	CG14636 -	chr3R	4211706	intron	CG14636 -	chr3R_14_4205001	chr3R_4205001	RAL-409_125b
2097	chr3R	4366714	4366780	chr3R	4375147	4375208	roo	20	8430	6.0	7.0	6.5	2.7	8494	chr3R	4366714	3` UTR	CG1090 +	chr3R	4370961	intergenic	not near genes	chr3R	4375208	5` UTR	CR44922 +	chr3R_20_4370001	chr3R_4370001	RAL-409_125b
2098	chr3R	4408376	4408432	chr3R	4412729	4412786	Juan	13	4351	4.5	4.5	4.5	2.4	4410	chr3R	4408376	intron	CG32944 -	chr3R	4410581	intron	CG32944 -	chr3R	4412786	intron	CG32944 -	chr3R_13_4410001	chr3R_4410001	RAL-409_125b
2099	chr3R	4609508	4609532	chr3R	4610722	4610746	1360	7	1212	12.0	9.5	10.8	0.6	1238	chr3R	4609508	intergenic	not near genes	chr3R	4610127	intergenic	not near genes	chr3R	4610746	intergenic	not near genes	chr3R_7_4610001	chr3R_4610001	RAL-409_125b
2100	chr3R	4609533	4609572	chr3R	4610717	4610781	1360	10	1209	7.0	8.5	7.8	1.1	1248	chr3R	4609533	intergenic	not near genes	chr3R	4610157	intergenic	not near genes	chr3R	4610781	intergenic	not near genes	chr3R_10_4610001	chr3R_4610001	RAL-409_125b
2104	chr3R	4753203	4753264	chr3R	4757556	4757596	F-element	20	4346	5.5	8.0	6.8	2.6	4393	chr3R	4753203	intron,intron	atms +,CG44098 -	chr3R	4755400	intron,intron	atms +,CG44098 -	chr3R	4757596	intron,exon	atms +,CG44098 -	chr3R_20_4755001	chr3R_4755001	RAL-409_125b
2109	chr3R	4887437	4887503	chr3R	4894857	4894925	rover	10	7418	4.0	4.5	4.2	1.9	7488	chr3R	4887437	intergenic	not near genes	chr3R	4891181	intergenic	not near genes	chr3R	4894925	intergenic	not near genes	chr3R_10_4890001	chr3R_4890001	RAL-409_125b
2114	chr3R	5045804	5045865	chr3R	5052956	5053017	HMS-Beagle	9	7151	6.5	3.0	4.8	1.6	7213	chr3R	5045804	3` UTR	CR43635 -	chr3R	5049410	intergenic	not near genes	chr3R	5053017	intergenic	CR45588 -	chr3R_9_5045001	chr3R_5045001	RAL-409_125b
2115	chr3R	5067940	5068001	chr3R	5073507	5073568	mdg3	17	5564	5.0	9.0	7.0	2.1	5628	chr3R	5067940	intergenic	not near genes	chr3R	5070754	intergenic	not near genes	chr3R	5073568	intergenic	not near genes	chr3R_17_5070001	chr3R_5070001	RAL-409_125b
2121	chr3R	5338353	5338417	chr3R	5343580	5343628	Rt1c	18	5219	9.0	7.0	8.0	2.0	5275	chr3R	5338353	intron	mtd -	chr3R	5340990	intron	mtd -	chr3R	5343628	intron	mtd -	chr3R_18_5340001	chr3R_5340001	RAL-409_125b
2123	chr3R	5445925	5445982	chr3R	5452435	5452481	Burdock	14	6508	7.0	8.0	7.5	1.6	6556	chr3R	5445925	intron	CG14669 +	chr3R	5449203	intron	CG14669 +	chr3R	5452481	intron	CG14669 +	chr3R_14_5445001	chr3R_5445001	RAL-409_125b
2128	chr3R	5745992	5746023	chr3R	5746262	5746299	pogo	4	277	4.0	8.5	6.2	0.6	307	chr3R	5745992	3` UTR	Madm +	chr3R	5746146	3` UTR	Madm +	chr3R	5746299	3` UTR	Madm +	chr3R_4_5745001	chr3R_5745001	RAL-409_125b
2129	chr3R	5746973	5747029	chr3R	5753214	5753270	diver	13	6240	5.5	8.5	7.0	1.6	6297	chr3R	5746973	intergenic	Madm +	chr3R	5750122	intergenic	not near genes	chr3R	5753270	intergenic	CG2091 -	chr3R_13_5750001	chr3R_5750001	RAL-409_125b
2131	chr3R	5809081	5809133	chr3R	5809355	5809424	pogo	14	286	6.0	7.5	6.8	1.8	343	chr3R	5809081	3` UTR	CG11000 +	chr3R	5809252	3` UTR	CG11000 +	chr3R	5809424	3` UTR	CG11000 +	chr3R_14_5805001	chr3R_5805001	RAL-409_125b
2132	chr3R	5822376	5822405	chr3R	5823568	5823615	1360	6	1211	4.5	7.5	6.0	0.9	1239	chr3R	5822376	3` UTR	CG2023 -	chr3R	5822996	3` UTR	CG2023 -	chr3R	5823615	3` UTR	CG2023 -	chr3R_6_5820001	chr3R_5820001	RAL-409_125b
2135	chr3R	5927535	5927581	chr3R	5927810	5927851	pogo	14	278	6.5	4.0	5.2	2.3	316	chr3R	5927535	intron	CG34113 -	chr3R	5927693	intron	CG34113 -	chr3R	5927851	intron	CG34113 -	chr3R_14_5925001	chr3R_5925001	RAL-409_125b
2140	chr3R	6015949	6015988	chr3R	6024442	6024500	Tirant	15	8510	3.5	3.0	3.2	3.6	8551	chr3R	6015949	intergenic	not near genes	chr3R	6020224	intergenic	not near genes	chr3R	6024500	intergenic	not near genes	chr3R_15_6020001	chr3R_6020001	RAL-409_125b
2144	chr3R	6121134	6121180	chr3R	6121369	6121448	BS	12	246	0.0	4.0	2.0	4.0	314	chr3R	6121134	intergenic	not near genes	chr3R	6121291	intergenic	not near genes	chr3R	6121448	intergenic	not near genes	chr3R_12_6120001	chr3R_6120001	RAL-409_125b
2145	chr3R	6158474	6158532	chr3R	6167100	6167126	Tirant	8	8618	3.5	5.5	4.5	1.5	8652	chr3R	6158474	intergenic	not near genes	chr3R	6162800	intergenic	not near genes	chr3R	6167126	intergenic	CG1077 +	chr3R_8_6160001	chr3R_6160001	RAL-409_125b
2146	chr3R	6175132	6175199	chr3R	6182453	6182503	HMS-Beagle2	14	7316	6.0	8.5	7.2	1.7	7371	chr3R	6175132	intergenic	Osi1 +	chr3R	6178818	intron	CR45194 +	chr3R	6182503	intergenic	CR45194 +	chr3R_14_6175001	chr3R_6175001	RAL-409_125b
2152	chr3R	6509988	6510040	chr3R	6515119	6515171	jockey	12	5128	3.5	6.0	4.8	2.1	5183	chr3R	6509988	intergenic	not near genes	chr3R	6512580	intergenic	not near genes	chr3R	6515171	intergenic	not near genes	chr3R_12_6510001	chr3R_6510001	RAL-409_125b
2181	chr3R	7694541	7694605	chr3R	7713641	7713716	invader3	7	19104	3.0	4.5	3.8	1.5	19175	chr3R	7694541	3` UTR	Nlg1 +	chr3R	7704128	intergenic	not near genes	chr3R	7713716	intergenic	not near genes	chr3R_7_7700001	chr3R_7700001	RAL-409_125b
2182	chr3R	7729420	7729490	chr3R	7737408	7737473	Stalker2	29	7985	5.0	7.0	6.0	4.1	8053	chr3R	7729420	intergenic	not near genes	chr3R	7733446	intergenic	not near genes	chr3R	7737473	intergenic	not near genes	chr3R_29_7730001	chr3R_7730001	RAL-409_125b
2188	chr3R	7849603	7849669	chr3R	7850820	7850880	1360	10	1206	2.0	5.5	3.8	2.1	1277	chr3R	7849603	intron	CG34384 +	chr3R	7850242	intron	CG34384 +	chr3R	7850880	intron	CG34384 +	chr3R_10_7850001	chr3R_7850001	RAL-409_125b
2192	chr3R	7973295	7973342	chr3R	7974409	7974435	1360	11	1111	3.5	10.0	6.8	1.4	1140	chr3R	7973295	intergenic	not near genes	chr3R	7973865	intergenic	not near genes	chr3R	7974435	3` UTR	CD98hc -	chr3R_11_7970001	chr3R_7970001	RAL-409_125b
2194	chr3R	8090516	8090567	chr3R	8094043	8094074	297	11	3517	6.5	7.5	7.0	1.4	3558	chr3R	8090516	intergenic	CR44330 +	chr3R	8092295	intergenic	not near genes	chr3R	8094074	intergenic	CG7900 +	chr3R_11_8090001	chr3R_8090001	RAL-409_125b
2195	chr3R	8094367	8094393	chr3R	8099722	8099748	Transpac	9	5354	9.5	6.5	8.0	1.0	5381	chr3R	8094367	intron	CG7900 +	chr3R	8097058	intron	CG7900 +	chr3R	8099748	intron	CG7900 +	chr3R_9_8095001	chr3R_8095001	RAL-409_125b
2196	chr3R	8094395	8094417	chr3R	8099713	8099772	Transpac	7	5348	6.5	6.5	6.5	0.9	5377	chr3R	8094395	intron	CG7900 +	chr3R	8097084	intron	CG7900 +	chr3R	8099772	intron	CG7900 +	chr3R_7_8095001	chr3R_8095001	RAL-409_125b
2197	chr3R	8101736	8101742	chr3R	8104850	8104874	G2	4	3128	9.5	5.5	7.5	0.5	3138	chr3R	8101736	exon	CG7900 +	chr3R	8103305	intron	CG7900 +	chr3R	8104874	3` UTR	CG7900 +	chr3R_4_8100001	chr3R_8100001	RAL-409_125b
2200	chr3R	8207541	8207585	chr3R	8208400	8208445	F-element	6	876	5.0	4.5	4.8	1.0	904	chr3R	8207541	intergenic	not near genes	chr3R	8207993	intergenic	not near genes	chr3R	8208445	intergenic	not near genes	chr3R_6_8205001	chr3R_8205001	RAL-409_125b
2204	chr3R	8402996	8403036	chr3R	8412186	8412252	roo	10	9208	7.0	4.5	5.8	1.5	9256	chr3R	8402996	intron	CG45263 -	chr3R	8407624	intron	CG45263 -	chr3R	8412252	intron	CG45263 -	chr3R_10_8405001	chr3R_8405001	RAL-409_125b
2208	chr3R	8570437	8570494	chr3R	8575123	8575155	HMS-Beagle	6	4679	5.0	8.5	6.8	0.8	4718	chr3R	8570437	intergenic	not near genes	chr3R	8572796	intergenic	not near genes	chr3R	8575155	intergenic	not near genes	chr3R_6_8570001	chr3R_8570001	RAL-409_125b
2209	chr3R	8601745	8601796	chr3R	8610931	8610987	roo	13	9192	5.0	5.5	5.2	2.1	9242	chr3R	8601745	intron	5-HT2B +	chr3R	8606366	intron	5-HT2B +	chr3R	8610987	intron	5-HT2B +	chr3R_13_8605001	chr3R_8605001	RAL-409_125b
2210	chr3R	8707325	8707337	chr3R	8709801	8709814	jockey	5	2481	11.0	4.5	7.8	0.6	2489	chr3R	8707325	intergenic	not near genes	chr3R	8708570	intergenic	not near genes	chr3R	8709814	intergenic	not near genes	chr3R_5_8705001	chr3R_8705001	RAL-409_125b
2211	chr3R	8707340	8707380	chr3R	8709799	8709871	jockey	8	2479	9.0	4.5	6.8	1.0	2531	chr3R	8707340	intergenic	not near genes	chr3R	8708606	intergenic	not near genes	chr3R	8709871	intergenic	not near genes	chr3R_8_8705001	chr3R_8705001	RAL-409_125b
2216	chr3R	8894830	8894897	chr3R	8896036	8896103	1360	18	1203	6.5	9.0	7.8	2.0	1273	chr3R	8894830	intron	pyd -	chr3R	8895466	intron	pyd -	chr3R	8896103	intron	pyd -	chr3R_18_8895001	chr3R_8895001	RAL-409_125b
2229	chr3R	9278770	9278798	chr3R	9284058	9284107	Rt1a	9	5305	1.0	5.0	3.0	2.2	5337	chr3R	9278770	intergenic	not near genes	chr3R	9281438	intergenic	not near genes	chr3R	9284107	intergenic	not near genes	chr3R_9_9280001	chr3R_9280001	RAL-409_125b
2232	chr3R	9319550	9319590	chr3R	9320020	9320070	jockey	16	482	7.5	5.5	6.5	2.1	520	chr3R	9319550	intron	CG8861 -	chr3R	9319810	intron	CG8861 -	chr3R	9320070	intron	CG8861 -	chr3R_16_9315001	chr3R_9315001	RAL-409_125b
2234	chr3R	9361804	9361840	chr3R	9362095	9362131	pogo	6	290	3.0	7.5	5.2	1.0	327	chr3R	9361804	3` UTR	CG45050 +	chr3R	9361968	3` UTR	CG45050 +	chr3R	9362131	3` UTR	CG45050 +	chr3R_6_9360001	chr3R_9360001	RAL-409_125b
2246	chr3R	10231746	10231806	chr3R	10237368	10237426	mdg3	22	5623	8.5	3.5	6.0	3.1	5680	chr3R	10231746	intron	CG42795 +	chr3R	10234586	intron	CG42795 +	chr3R	10237426	intron	CG42795 +	chr3R_22_10230001	chr3R_10230001	RAL-409_125b
2247	chr3R	10255339	10255377	chr3R	10260828	10260867	I-element	12	5486	8.5	6.5	7.5	1.4	5528	chr3R	10255339	intergenic	Sirt6 -,CG3999 +	chr3R	10258103	intron	Sirt6 -	chr3R	10260867	exon	Sirt6 -	chr3R_12_10255001	chr3R_10255001	RAL-409_125b
2260	chr3R	10804149	10804189	chr3R	10811731	10811771	17.6	7	7581	2.5	11.5	7.0	0.9	7622	chr3R	10804149	intergenic	CG14692 -	chr3R	10807960	intergenic	not near genes	chr3R	10811771	3` UTR	CG14693 -	chr3R_7_10805001	chr3R_10805001	RAL-409_125b
2267	chr3R	10957832	10957885	chr3R	10963252	10963318	Rt1c	11	5425	2.0	4.0	3.0	2.8	5486	chr3R	10957832	intergenic	not near genes	chr3R	10960575	intergenic	not near genes	chr3R	10963318	intergenic	not near genes	chr3R_11_10960001	chr3R_10960001	RAL-409_125b
2281	chr3R	11379210	11379254	chr3R	11388397	11388428	roo	7	9193	5.0	5.5	5.2	1.1	9218	chr3R	11379210	intron	pros +	chr3R	11383819	intron	pros +	chr3R	11388428	intron	pros +	chr3R_7_11380001	chr3R_11380001	RAL-409_125b
2289	chr3R	11841017	11841083	chr3R	11846257	11846311	BS	14	5232	6.0	6.5	6.2	1.9	5294	chr3R	11841017	intron	CG6959 -	chr3R	11843664	intron	CG6959 -	chr3R	11846311	intron	CG6959 -	chr3R_14_11840001	chr3R_11840001	RAL-409_125b
2293	chr3R	11957819	11957879	chr3R	11958152	11958212	S-element	6	328	5.0	0.5	2.8	1.6	393	chr3R	11957819	intergenic	not near genes	chr3R	11958016	intergenic	not near genes	chr3R	11958212	intergenic	not near genes	chr3R_6_11955001	chr3R_11955001	RAL-409_125b
2295	chr3R	12022837	12022897	chr3R	12025064	12025123	pogo	14	2226	6.0	6.0	6.0	2.0	2286	chr3R	12022837	intergenic	not near genes	chr3R	12023980	intergenic	not near genes	chr3R	12025123	intergenic	not near genes	chr3R_14_12020001	chr3R_12020001	RAL-409_125b
2315	chr3R	12780260	12780296	chr3R	12780422	12780453	BS	6	161	6.0	0.5	3.2	1.4	193	chr3R	12780260	intron	beat-Vc -	chr3R	12780356	intron	beat-Vc -	chr3R	12780453	intron	beat-Vc -	chr3R_6_12780001	chr3R_12780001	RAL-409_125b
2320	chr3R	12920132	12920176	chr3R	12925363	12925429	copia	12	5246	6.5	7.0	6.8	1.5	5297	chr3R	12920132	intron	beat-Vb +	chr3R	12922780	intron	beat-Vb +	chr3R	12925429	intron	beat-Vb +	chr3R_12_12920001	chr3R_12920001	RAL-409_125b
2322	chr3R	13135787	13135835	chr3R	13138002	13138050	pogo	16	2213	3.5	2.0	2.8	4.2	2263	chr3R	13135787	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13136918	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13138050	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R_16_13135001	chr3R_13135001	RAL-409_125b
2324	chr3R	13143004	13143063	chr3R	13148613	13148668	mdg3	13	5608	5.0	4.0	4.5	2.4	5664	chr3R	13143004	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13145836	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13148668	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R_13_13145001	chr3R_13145001	RAL-409_125b
2325	chr3R	13314061	13314121	chr3R	13318898	13318933	Doc	9	4832	3.5	5.5	4.5	1.6	4872	chr3R	13314061	intergenic	not near genes	chr3R	13316497	intergenic	not near genes	chr3R	13318933	intergenic	CG45080 -	chr3R_9_13315001	chr3R_13315001	RAL-409_125b
2329	chr3R	13517222	13517258	chr3R	13520084	13520118	jockey	7	2864	2.5	3.0	2.8	1.8	2896	chr3R	13517222	intergenic	not near genes	chr3R	13518670	intergenic	not near genes	chr3R	13520118	intergenic	not near genes	chr3R_7_13515001	chr3R_13515001	RAL-409_125b
2352	chr3R	14180779	14180843	chr3R	14185589	14185658	F-element	10	4814	7.5	7.5	7.5	1.2	4879	chr3R	14180779	intron	Dop1R1 -	chr3R	14183218	intron	Dop1R1 -	chr3R	14185658	intron	Dop1R1 -	chr3R_10_14180001	chr3R_14180001	RAL-409_125b
2353	chr3R	14194387	14194452	chr3R	14203585	14203651	roo	14	9196	4.0	4.5	4.2	2.7	9264	chr3R	14194387	intron	Dop1R1 -	chr3R	14199019	intron	Dop1R1 -	chr3R	14203651	intron	Dop1R1 -	chr3R_14_14195001	chr3R_14195001	RAL-409_125b
2354	chr3R	14246371	14246408	chr3R	14247893	14247949	jockey	9	1527	7.5	5.5	6.5	1.2	1578	chr3R	14246371	intergenic	not near genes	chr3R	14247160	intergenic	not near genes	chr3R	14247949	intergenic	not near genes	chr3R_9_14245001	chr3R_14245001	RAL-409_125b
2377	chr3R	15041366	15041407	chr3R	15045200	15045241	Doc	4	3834	0.0	3.0	1.5	1.6	3875	chr3R	15041366	intergenic	not near genes	chr3R	15043304	intergenic	not near genes	chr3R	15045241	intergenic	not near genes	chr3R_4_15040001	chr3R_15040001	RAL-409_125b
2380	chr3R	15079764	15079828	chr3R	15080055	15080112	pogo	11	290	9.0	0.0	4.5	2.0	348	chr3R	15079764	3` UTR	CG6966 -	chr3R	15079938	3` UTR	CG6966 -	chr3R	15080112	3` UTR	CG6966 -	chr3R_11_15075001	chr3R_15075001	RAL-409_125b
2382	chr3R	15102419	15102486	chr3R	15109783	15109813	412	12	7359	4.5	5.0	4.8	2.1	7394	chr3R	15102419	intron	CG42788 -	chr3R	15106116	intron	CG42788 -	chr3R	15109813	intron	CG42788 -	chr3R_12_15105001	chr3R_15105001	RAL-409_125b
2384	chr3R	15132041	15132065	chr3R	15135141	15135175	Juan	9	3108	5.0	10.5	7.8	1.0	3134	chr3R	15132041	intergenic	CG42788 -	chr3R	15133608	intergenic	not near genes	chr3R	15135175	3` UTR	CG6912 -	chr3R_9_15130001	chr3R_15130001	RAL-409_125b
2385	chr3R	15162516	15162563	chr3R	15167319	15167371	F-element	7	4814	0.0	4.0	2.0	2.3	4855	chr3R	15162516	intron	Gyc88E +	chr3R	15164944	intron	Gyc88E +	chr3R	15167371	intron	Gyc88E +	chr3R_7_15160001	chr3R_15160001	RAL-409_125b
2390	chr3R	15601132	15601189	chr3R	15608704	15608750	412	11	7568	4.0	11.0	7.5	1.3	7618	chr3R	15601132	intergenic	not near genes	chr3R	15604941	intergenic	not near genes	chr3R	15608750	intergenic	not near genes	chr3R_11_15600001	chr3R_15600001	RAL-409_125b
2392	chr3R	15618710	15618763	chr3R	15626229	15626287	blood	10	7516	3.0	4.0	3.5	2.2	7577	chr3R	15618710	intergenic	not near genes	chr3R	15622498	intergenic	not near genes	chr3R	15626287	intergenic	not near genes	chr3R_10_15620001	chr3R_15620001	RAL-409_125b
2398	chr3R	15735207	15735232	chr3R	15739962	15740002	F-element	5	4766	8.0	3.0	5.5	0.8	4795	chr3R	15735207	intergenic	not near genes	chr3R	15737604	intergenic	not near genes	chr3R	15740002	intergenic	not near genes	chr3R_5_15735001	chr3R_15735001	RAL-409_125b
2416	chr3R	16756282	16756306	chr3R	16762517	16762547	diver	9	6237	4.0	2.5	3.2	2.1	6265	chr3R	16756282	intron	bxd -	chr3R	16759414	intron	bxd -	chr3R	16762547	intron	bxd -	chr3R_9_16755001	chr3R_16755001	RAL-409_125b
2417	chr3R	16756307	16756313	chr3R	16762511	16762547	diver	4	6220	3.5	2.5	3.0	1.0	6240	chr3R	16756307	intron	bxd -	chr3R	16759427	intron	bxd -	chr3R	16762547	intron	bxd -	chr3R_4_16755001	chr3R_16755001	RAL-409_125b
2422	chr3R	17294635	17294658	chr3R	17295113	17295136	BS	4	476	13.5	8.0	10.8	0.3	501	chr3R	17294635	intergenic	not near genes	chr3R	17294886	intergenic	not near genes	chr3R	17295136	intergenic	not near genes	chr3R_4_17290001	chr3R_17290001	RAL-409_125b
2423	chr3R	17294670	17294680	chr3R	17295107	17295158	BS	6	471	8.5	6.5	7.5	0.7	488	chr3R	17294670	intergenic	not near genes	chr3R	17294914	intergenic	not near genes	chr3R	17295158	intergenic	not near genes	chr3R_6_17290001	chr3R_17290001	RAL-409_125b
2426	chr3R	17346662	17346710	chr3R	17348275	17348322	F-element	13	1613	3.5	7.5	5.5	2.0	1660	chr3R	17346662	intron	beat-IIa -	chr3R	17347492	intron	beat-IIa -	chr3R	17348322	intron	beat-IIa -	chr3R_13_17345001	chr3R_17345001	RAL-409_125b
2438	chr3R	17591260	17591300	chr3R	17591724	17591780	F-element	12	472	5.5	2.5	4.0	2.4	520	chr3R	17591260	intergenic	not near genes	chr3R	17591520	intergenic	not near genes	chr3R	17591780	intergenic	not near genes	chr3R_12_17590001	chr3R_17590001	RAL-409_125b
2439	chr3R	17638283	17638339	chr3R	17638819	17638869	roo	17	535	5.5	7.5	6.5	2.3	586	chr3R	17638283	intron	CG43175 +	chr3R	17638576	intron	CG43175 +	chr3R	17638869	intron,intron	CG43175 +,CR45222 +	chr3R_17_17635001	chr3R_17635001	RAL-409_125b
2454	chr3R	17925816	17925824	chr3R	17927328	17927335	hobo	4	1512	8.0	6.5	7.2	0.5	1519	chr3R	17925816	intron	cpo +	chr3R	17926576	intron	cpo +	chr3R	17927335	intron	cpo +	chr3R_4_17925001	chr3R_17925001	RAL-409_125b
2455	chr3R	17925825	17925860	chr3R	17927326	17927339	hobo	6	1505	5.5	6.5	6.0	0.9	1514	chr3R	17925825	intron	cpo +	chr3R	17926582	intron	cpo +	chr3R	17927339	intron	cpo +	chr3R_6_17925001	chr3R_17925001	RAL-409_125b
2459	chr3R	18032735	18032805	chr3R	18040453	18040523	opus	10	7717	2.0	2.0	2.0	3.3	7788	chr3R	18032735	intergenic	not near genes	chr3R	18036629	intergenic	not near genes	chr3R	18040523	intergenic	not near genes	chr3R_10_18035001	chr3R_18035001	RAL-409_125b
2461	chr3R	18061552	18061583	chr3R	18063170	18063201	F-element	8	1615	7.5	5.5	6.5	1.1	1649	chr3R	18061552	intergenic	not near genes	chr3R	18062376	intergenic	not near genes	chr3R	18063201	intergenic	not near genes	chr3R_8_18060001	chr3R_18060001	RAL-409_125b
2480	chr3R	18606472	18606522	chr3R	18610744	18610798	F-element	16	4277	10.0	10.0	10.0	1.5	4326	chr3R	18606472	intron,intron	qin +,CG14304 -	chr3R	18608635	intron,intron	qin +,CG14304 -	chr3R	18610798	intron,intron	qin +,CG14304 -	chr3R_16_18605001	chr3R_18605001	RAL-409_125b
2491	chr3R	18934400	18934438	chr3R	18934527	18934567	roo	4	124	5.0	5.5	5.2	0.6	167	chr3R	18934400	intron	CG42613 +	chr3R	18934484	intron	CG42613 +	chr3R	18934567	intron	CG42613 +	chr3R_4_18930001	chr3R_18930001	RAL-409_125b
2498	chr3R	19193002	19193005	chr3R	19197286	19197340	F-element	4	4304	1.5	4.5	3.0	1.0	4338	chr3R	19193002	intron	CG31475 +	chr3R	19195171	intron	CG31475 +	chr3R	19197340	intron	CG31475 +	chr3R_4_19195001	chr3R_19195001	RAL-409_125b
2523	chr3R	20109495	20109559	chr3R	20114744	20114815	copia	8	5253	3.0	3.5	3.2	1.9	5320	chr3R	20109495	intergenic	not near genes	chr3R	20112155	intergenic	not near genes	chr3R	20114815	intergenic	CG10887 +	chr3R_8_20110001	chr3R_20110001	RAL-409_125b
2527	chr3R	20156656	20156714	chr3R	20165871	20165934	roo	10	9215	5.0	8.5	6.8	1.3	9278	chr3R	20156656	intergenic	not near genes	chr3R	20161295	intergenic	not near genes	chr3R	20165934	intergenic	not near genes	chr3R_10_20160001	chr3R_20160001	RAL-409_125b
2530	chr3R	20245240	20245294	chr3R	20248896	20248954	F-element	9	3659	4.5	0.0	2.2	2.8	3714	chr3R	20245240	3` UTR	Nlg4 +	chr3R	20247097	intergenic	not near genes	chr3R	20248954	intergenic	not near genes	chr3R_9_20245001	chr3R_20245001	RAL-409_125b
2532	chr3R	20266486	20266535	chr3R	20273000	20273051	Burdock	16	6514	5.5	4.5	5.0	2.7	6565	chr3R	20266486	intron	cic +	chr3R	20269768	intron	cic +	chr3R	20273051	intron	cic +	chr3R_16_20265001	chr3R_20265001	RAL-409_125b
2535	chr3R	20330956	20331021	chr3R	20331492	20331557	roo	20	535	5.5	5.5	5.5	3.1	601	chr3R	20330956	intergenic	Sirt2 +	chr3R	20331256	intergenic	Sirt2 +	chr3R	20331557	intergenic	not near genes	chr3R_20_20330001	chr3R_20330001	RAL-409_125b
2545	chr3R	20512965	20513007	chr3R	20515718	20515760	opus	12	2752	4.5	5.0	4.8	2.1	2795	chr3R	20512965	intergenic	CG4288 -	chr3R	20514362	intergenic	not near genes	chr3R	20515760	intergenic	not near genes	chr3R_12_20510001	chr3R_20510001	RAL-409_125b
2561	chr3R	20854460	20854509	chr3R	20859280	20859333	Doc	15	4828	6.0	5.0	5.5	2.3	4873	chr3R	20854460	intron	Ir93a -	chr3R	20856896	intron	Ir93a -	chr3R	20859333	exon	Ir93a -	chr3R_15_20855001	chr3R_20855001	RAL-409_125b
2569	chr3R	21141629	21141675	chr3R	21150159	21150182	Tirant	6	8528	6.0	6.5	6.2	0.8	8553	chr3R	21141629	intron	SNF4Agamma +	chr3R	21145906	intron	SNF4Agamma +	chr3R	21150182	intron	SNF4Agamma +	chr3R_6_21145001	chr3R_21145001	RAL-409_125b
2592	chr3R	21761083	21761149	chr3R	21768525	21768591	mdg1	11	7430	5.5	9.5	7.5	1.3	7508	chr3R	21761083	exon	CG42335 +	chr3R	21764837	intron	CG42335 +	chr3R	21768591	exon	CG42335 +	chr3R_11_21760001	chr3R_21760001	RAL-409_125b
2609	chr3R	22234666	22234706	chr3R	22236023	22236075	pogo	12	1364	2.0	3.5	2.8	3.2	1409	chr3R	22234666	intron	SKIP +	chr3R	22235370	intron	SKIP +	chr3R	22236075	intron	SKIP +	chr3R_12_22235001	chr3R_22235001	RAL-409_125b
2610	chr3R	22239472	22239502	chr3R	22248571	22248612	roo	6	9108	11.0	9.0	10.0	0.5	9140	chr3R	22239472	intron	SKIP +	chr3R	22244042	intron	SKIP +	chr3R	22248612	intron	SKIP +	chr3R_6_22240001	chr3R_22240001	RAL-409_125b
2614	chr3R	22450534	22450565	chr3R	22453188	22453255	NOF	8	2683	4.5	6.5	5.5	1.2	2721	chr3R	22450534	intron	CG34376 +	chr3R	22451894	intron	CG34376 +	chr3R	22453255	intron	CG34376 +	chr3R_8_22450001	chr3R_22450001	RAL-409_125b
2623	chr3R	22881196	22881215	chr3R	22884947	22884971	Doc	5	3755	4.0	6.5	5.2	0.8	3775	chr3R	22881196	intergenic	not near genes	chr3R	22883084	intergenic	not near genes	chr3R	22884971	intergenic	not near genes	chr3R_5_22880001	chr3R_22880001	RAL-409_125b
2648	chr3R	23558351	23558420	chr3R	23560180	23560240	Bari1	17	1827	3.5	2.0	2.8	4.5	1889	chr3R	23558351	intron	beat-IV +	chr3R	23559296	intron	beat-IV +	chr3R	23560240	intron	beat-IV +	chr3R_17_23555001	chr3R_23555001	RAL-409_125b
2652	chr3R	23684664	23684722	chr3R	23685180	23685248	roo	15	519	1.5	4.0	2.8	3.9	584	chr3R	23684664	exon	CG18754 +	chr3R	23684956	intron	CG18754 +	chr3R	23685248	exon	CG18754 +	chr3R_15_23680001	chr3R_23680001	RAL-409_125b
2658	chr3R	23835353	23835427	chr3R	23844554	23844627	roo	9	9199	6.5	5.0	5.8	1.3	9274	chr3R	23835353	intron	CG34355 +	chr3R	23839990	intron	CG34355 +	chr3R	23844627	intron	CG34355 +	chr3R_9_23835001	chr3R_23835001	RAL-409_125b
2659	chr3R	23851038	23851075	chr3R	23858755	23858792	opus	11	7716	8.0	13.0	10.5	1.0	7754	chr3R	23851038	3` UTR	CG34355 +	chr3R	23854915	intergenic	not near genes	chr3R	23858792	intergenic	not near genes	chr3R_11_23850001	chr3R_23850001	RAL-409_125b
2662	chr3R	24072065	24072099	chr3R	24072532	24072572	jockey	9	480	4.5	8.5	6.5	1.2	507	chr3R	24072065	intron	4EHP -	chr3R	24072318	intron	4EHP -	chr3R	24072572	intron	4EHP -	chr3R_9_24070001	chr3R_24070001	RAL-409_125b
2663	chr3R	24076875	24076940	chr3R	24078387	24078440	hobo	8	1507	5.0	6.5	5.8	1.2	1565	chr3R	24076875	intron	4EHP -	chr3R	24077658	intron	4EHP -	chr3R	24078440	intron	4EHP -	chr3R_8_24075001	chr3R_24075001	RAL-409_125b
2667	chr3R	24207180	24207236	chr3R	24212306	24212362	flea	8	5123	6.5	10.5	8.5	0.8	5182	chr3R	24207180	intron	twin -	chr3R	24209771	intron	twin -	chr3R	24212362	intron	twin -	chr3R_8_24205001	chr3R_24205001	RAL-409_125b
2672	chr3R	24493236	24493254	chr3R	24493512	24493533	BS	8	277	13.5	7.5	10.5	0.7	297	chr3R	24493236	intergenic	not near genes	chr3R	24493384	intergenic	not near genes	chr3R	24493533	intergenic	not near genes	chr3R_8_24490001	chr3R_24490001	RAL-409_125b
2673	chr3R	24493256	24493298	chr3R	24493509	24493576	BS	14	274	9.0	7.0	8.0	1.6	320	chr3R	24493256	intergenic	not near genes	chr3R	24493416	intergenic	not near genes	chr3R	24493576	intergenic	not near genes	chr3R_14_24490001	chr3R_24490001	RAL-409_125b
2675	chr3R	24594627	24594665	chr3R	24594917	24594955	pogo	8	289	4.5	8.0	6.2	1.1	328	chr3R	24594627	intron	mld +	chr3R	24594791	intron	mld +	chr3R	24594955	intron	mld +	chr3R_8_24590001	chr3R_24590001	RAL-409_125b
2681	chr3R	24730068	24730074	chr3R	24732473	24732499	Doc	4	2420	5.0	0.0	2.5	1.1	2431	chr3R	24730068	intron	tok +	chr3R	24731284	intron	tok +	chr3R	24732499	intron	tok +	chr3R_4_24730001	chr3R_24730001	RAL-409_125b
2686	chr3R	24927091	24927105	chr3R	24931922	24931930	Doc	6	4836	6.5	5.0	5.8	0.9	4839	chr3R	24927091	intergenic	Trf4-2 +	chr3R	24929510	intergenic	not near genes	chr3R	24931930	intergenic	CG11771 +	chr3R_6_24925001	chr3R_24925001	RAL-409_125b
2687	chr3R	24927110	24927139	chr3R	24931920	24931974	Doc	12	4835	3.0	4.5	3.8	2.5	4864	chr3R	24927110	intergenic	Trf4-2 +	chr3R	24929542	intergenic	not near genes	chr3R	24931974	intergenic	CG11771 +	chr3R_12_24925001	chr3R_24925001	RAL-409_125b
2710	chr3R	25725797	25725851	chr3R	25735002	25735061	roo	10	9208	5.5	6.0	5.8	1.5	9264	chr3R	25725797	intron	LpR2 -	chr3R	25730429	intron	LpR2 -	chr3R	25735061	intron	LpR2 -	chr3R_10_25730001	chr3R_25730001	RAL-409_125b
2714	chr3R	25832659	25832702	chr3R	25841883	25841921	roo	16	9227	8.5	5.5	7.0	2.0	9262	chr3R	25832659	exon	alpha4GT2 +	chr3R	25837290	intron	alpha4GT2 +	chr3R	25841921	exon	alpha4GT2 +	chr3R_16_25835001	chr3R_25835001	RAL-409_125b
2715	chr3R	25832704	25832721	chr3R	25841871	25841933	roo	7	9204	4.5	4.0	4.2	1.3	9229	chr3R	25832704	exon	alpha4GT2 +	chr3R	25837318	intron	alpha4GT2 +	chr3R	25841933	exon	alpha4GT2 +	chr3R_7_25835001	chr3R_25835001	RAL-409_125b
2737	chr3R	26376306	26376346	chr3R	26385491	26385570	roo	5	9206	7.5	0.0	3.8	1.0	9264	chr3R	26376306	intergenic	not near genes	chr3R	26380938	intergenic	not near genes	chr3R	26385570	intergenic	not near genes	chr3R_5_26380001	chr3R_26380001	RAL-409_125b
2740	chr3R	26510477	26510535	chr3R	26519582	26519629	roo	14	9104	1.5	7.5	4.5	2.5	9152	chr3R	26510477	intron	plum -	chr3R	26515053	intron	plum -	chr3R	26519629	intron,5` UTR	plum -,CR45226 +	chr3R_14_26515001	chr3R_26515001	RAL-409_125b
2742	chr3R	26558300	26558354	chr3R	26565643	26565680	Stalker4	10	7345	4.5	3.5	4.0	2.0	7380	chr3R	26558300	intron	scrib +	chr3R	26561990	intron	scrib +	chr3R	26565680	intron	scrib +	chr3R_10_26560001	chr3R_26560001	RAL-409_125b
2745	chr3R	26642688	26642747	chr3R	26643131	26643191	jockey	18	441	11.5	7.5	9.5	1.7	503	chr3R	26642688	intergenic	not near genes	chr3R	26642940	intergenic	not near genes	chr3R	26643191	intergenic	not near genes	chr3R_18_26640001	chr3R_26640001	RAL-409_125b
2750	chr3R	26810510	26810564	chr3R	26811045	26811089	roo	7	532	7.0	10.0	8.5	0.7	579	chr3R	26810510	intron	Tl +	chr3R	26810800	intron	Tl +	chr3R	26811089	intron	Tl +	chr3R_7_26810001	chr3R_26810001	RAL-409_125b
2756	chr3R	27007359	27007429	chr3R	27016544	27016594	roo	14	9172	4.0	3.5	3.8	2.9	9235	chr3R	27007359	intron	RYa-R +	chr3R	27011976	intron	RYa-R +	chr3R	27016594	intron	RYa-R +	chr3R_14_27010001	chr3R_27010001	RAL-409_125b
2760	chr3R	27140471	27140532	chr3R	27148131	27148187	412	13	7657	11.0	5.5	8.2	1.4	7716	chr3R	27140471	intron	CG6051 -	chr3R	27144329	intron	CG6051 -	chr3R	27148187	intron	CG6051 -	chr3R_13_27140001	chr3R_27140001	RAL-409_125b
2763	chr3R	27342756	27342808	chr3R	27351387	27351439	Tirant	8	8627	8.5	4.5	6.5	1.1	8683	chr3R	27342756	intron	CG42534 +	chr3R	27347098	intron	CG42534 +	chr3R	27351439	intron	CG42534 +	chr3R_8_27345001	chr3R_27345001	RAL-409_125b
2772	chr3R	27725503	27725582	chr3R	27731003	27731075	I-element	4	5496	0.5	4.5	2.5	1.1	5572	chr3R	27725503	intergenic	not near genes	chr3R	27728289	intergenic	not near genes	chr3R	27731075	intergenic	not near genes	chr3R_4_27725001	chr3R_27725001	RAL-409_125b
2773	chr3R	27791635	27791648	chr3R	27794811	27794820	Rt1c	4	3174	10.5	10.5	10.5	0.3	3185	chr3R	27791635	intron	CG34353 -	chr3R	27793228	intron	CG34353 -	chr3R	27794820	intron	CG34353 -	chr3R_4_27790001	chr3R_27790001	RAL-409_125b
2775	chr3R	27856731	27856770	chr3R	27858248	27858298	hopper2	11	1524	8.5	4.0	6.2	1.5	1567	chr3R	27856731	intron	CG34353 -	chr3R	27857514	intron	CG34353 -	chr3R	27858298	intron	CG34353 -	chr3R_11_27855001	chr3R_27855001	RAL-409_125b
2776	chr3R	27862933	27862955	chr3R	27868283	27868310	Transpac	6	5351	8.0	5.0	6.5	0.8	5377	chr3R	27862933	intron	CG34353 -	chr3R	27865622	intron	CG34353 -	chr3R	27868310	intron	CG34353 -	chr3R_6_27865001	chr3R_27865001	RAL-409_125b
2777	chr3R	27862957	27862975	chr3R	27868271	27868298	Transpac	6	5336	6.0	4.0	5.0	1.0	5341	chr3R	27862957	intron	CG34353 -	chr3R	27865628	intron	CG34353 -	chr3R	27868298	intron	CG34353 -	chr3R_6_27865001	chr3R_27865001	RAL-409_125b
2778	chr3R	27875659	27875721	chr3R	27882764	27882821	297	11	7102	3.5	9.5	6.5	1.5	7162	chr3R	27875659	intron	CG34353 -	chr3R	27879240	intron	CG34353 -	chr3R	27882821	intron	CG34353 -	chr3R_11_27875001	chr3R_27875001	RAL-409_125b
2781	chr3R	28068498	28068519	chr3R	28073946	28073991	I-element	7	5474	0.5	5.0	2.8	1.8	5493	chr3R	28068498	intron	CG34362 +	chr3R	28071244	intron	CG34362 +	chr3R	28073991	intron	CG34362 +	chr3R_7_28070001	chr3R_28070001	RAL-409_125b
2784	chr3R	28173626	28173683	chr3R	28181106	28181163	mdg1	19	7478	7.5	6.0	6.8	2.4	7537	chr3R	28173626	intron	CG34354 +	chr3R	28177394	intron	CG34354 +	chr3R	28181163	intron	CG34354 +	chr3R_19_28175001	chr3R_28175001	RAL-409_125b
2786	chr3R	28253295	28253367	chr3R	28255855	28255875	jockey	14	2546	2.5	4.0	3.2	3.3	2580	chr3R	28253295	intergenic	not near genes	chr3R	28254585	intergenic	not near genes	chr3R	28255875	intergenic	not near genes	chr3R_14_28250001	chr3R_28250001	RAL-409_125b
2790	chr3R	28302062	28302108	chr3R	28302539	28302599	jockey	4	488	1.5	5.5	3.5	0.9	537	chr3R	28302062	intergenic	not near genes	chr3R	28302330	intergenic	not near genes	chr3R	28302599	intergenic	not near genes	chr3R_4_28300001	chr3R_28300001	RAL-409_125b
2800	chr3R	28792822	28792904	chr3R	28797967	28798022	jockey	18	5125	5.5	7.0	6.2	2.5	5200	chr3R	28792822	intergenic	not near genes	chr3R	28795422	intergenic	not near genes	chr3R	28798022	intergenic	not near genes	chr3R_18_28795001	chr3R_28795001	RAL-409_125b
2811	chr3R	29079354	29079396	chr3R	29080764	29080818	NOF	9	1419	8.0	7.5	7.8	1.0	1464	chr3R	29079354	intron	CG11873 +	chr3R	29080086	intron	CG11873 +	chr3R	29080818	intron	CG11873 +	chr3R_9_29080001	chr3R_29080001	RAL-409_125b
2817	chr3R	29319778	29319844	chr3R	29320147	29320213	jockey	12	368	4.5	7.5	6.0	1.7	435	chr3R	29319778	intergenic	Cnx99A -	chr3R	29319996	intergenic	Cnx99A -	chr3R	29320213	intergenic	not near genes	chr3R_12_29315001	chr3R_29315001	RAL-409_125b
2822	chr3R	29406612	29406628	chr3R	29407927	29407964	jockey	6	1322	6.0	13.0	9.5	0.6	1352	chr3R	29406612	intron	Ptp99A +	chr3R	29407288	intron	Ptp99A +	chr3R	29407964	intron	Ptp99A +	chr3R_6_29405001	chr3R_29405001	RAL-409_125b
2835	chr3R	29738240	29738266	chr3R	29739756	29739782	hobo	14	1516	9.0	10.5	9.8	1.3	1542	chr3R	29738240	intergenic	CG1969 +,CG7598 +	chr3R	29739011	intron	CG1969 +	chr3R	29739782	5` UTR	CG1969 +	chr3R_14_29735001	chr3R_29735001	RAL-409_125b
2836	chr3R	29738277	29738293	chr3R	29739749	29739810	hobo	4	1503	6.0	9.5	7.8	0.5	1533	chr3R	29738277	5` UTR	CG1969 +	chr3R	29739044	intron	CG1969 +	chr3R	29739810	5` UTR	CG1969 +	chr3R_4_29735001	chr3R_29735001	RAL-409_125b
2837	chr3R	29760322	29760386	chr3R	29761573	29761575	pogo	14	1245	6.5	7.0	6.8	1.8	1253	chr3R	29760322	intergenic	not near genes	chr3R	29760948	intergenic	not near genes	chr3R	29761575	intergenic	not near genes	chr3R_14_29760001	chr3R_29760001	RAL-409_125b
2839	chr3R	29881989	29882023	chr3R	29891187	29891230	roo	11	9205	8.0	9.0	8.5	1.2	9241	chr3R	29881989	intron	CG31038 +	chr3R	29886610	intron	CG31038 +	chr3R	29891230	intron	CG31038 +	chr3R_11_29885001	chr3R_29885001	RAL-409_125b
2840	chr3R	29882030	29882044	chr3R	29891176	29891246	roo	4	9172	7.5	5.5	6.5	0.5	9216	chr3R	29882030	intron	CG31038 +	chr3R	29886638	intron	CG31038 +	chr3R	29891246	intron	CG31038 +	chr3R_4_29885001	chr3R_29885001	RAL-409_125b
2846	chr3R	30084812	30084878	chr3R	30086318	30086384	hobo	10	1514	2.0	3.5	2.8	2.6	1572	chr3R	30084812	intron	sima +	chr3R	30085598	intron	sima +	chr3R	30086384	intron	sima +	chr3R_10_30085001	chr3R_30085001	RAL-409_125b
2850	chr3R	30238725	30238789	chr3R	30239933	30240004	1360	12	1211	4.5	6.0	5.2	1.9	1279	chr3R	30238725	intergenic	not near genes	chr3R	30239364	intergenic	not near genes	chr3R	30240004	intergenic	not near genes	chr3R_12_30235001	chr3R_30235001	RAL-409_125b
2856	chr3R	30396172	30396220	chr3R	30404483	30404536	roo	8	8314	4.0	3.0	3.5	1.8	8364	chr3R	30396172	intergenic	not near genes	chr3R	30400354	intergenic	not near genes	chr3R	30404536	5` UTR	CR45570 +	chr3R_8_30400001	chr3R_30400001	RAL-409_125b
2860	chr3R	30480448	30480459	chr3R	30482952	30482972	jockey	4	2509	12.0	1.0	6.5	0.5	2524	chr3R	30480448	intron	PH4alphaEFB +	chr3R	30481710	intron	PH4alphaEFB +	chr3R	30482972	intron	PH4alphaEFB +	chr3R_4_30480001	chr3R_30480001	RAL-409_125b
2861	chr3R	30480463	30480505	chr3R	30482951	30483023	jockey	12	2504	4.0	1.0	2.5	3.4	2560	chr3R	30480463	intron	PH4alphaEFB +	chr3R	30481743	intron	PH4alphaEFB +	chr3R	30483023	intron	PH4alphaEFB +	chr3R_12_30480001	chr3R_30480001	RAL-409_125b
2869	chr3R	30679475	30679536	chr3R	30686994	30687049	blood	19	7515	7.5	6.0	6.8	2.4	7574	chr3R	30679475	intergenic	not near genes	chr3R	30683262	intergenic	not near genes	chr3R	30687049	intergenic	not near genes	chr3R_19_30680001	chr3R_30680001	RAL-409_125b
2883	chr3R	31279333	31279401	chr3R	31285574	31285632	diver	13	6235	3.5	3.5	3.5	2.9	6299	chr3R	31279333	intergenic	not near genes	chr3R	31282482	intergenic	not near genes	chr3R	31285632	intergenic	not near genes	chr3R_13_31280001	chr3R_31280001	RAL-409_125b
2886	chr3R	31413089	31413109	chr3R	31418293	31418359	copia	4	5224	8.0	0.5	4.2	0.8	5270	chr3R	31413089	intron	Gprk2 +	chr3R	31415724	intron	Gprk2 +	chr3R	31418359	intron	Gprk2 +	chr3R_4_31415001	chr3R_31415001	RAL-409_125b
2891	chr3R	31691509	31691559	chr3R	31696305	31696369	Doc	13	4808	5.0	9.0	7.0	1.6	4860	chr3R	31691509	intergenic	not near genes	chr3R	31693939	intergenic	not near genes	chr3R	31696369	intergenic	not near genes	chr3R_13_31690001	chr3R_31690001	RAL-409_125b
2900	chr3R	31997953	31998016	chr3R	32005468	32005516	blood	23	7515	2.0	4.0	3.0	5.8	7563	chr3R	31997953	intron	heph -	chr3R	32001734	intron	heph -	chr3R	32005516	intron	heph -	chr3R_23_32000001	chr3R_32000001	RAL-409_125b
2903	chr4	76461	76495	chr4	81954	81988	I-element	10	5490	10.5	5.5	8.0	1.1	5527	chr4	76461	intron	pan +	chr4	79224	intron	pan +	chr4	81988	intron	pan +	chr4_10_75001	chr4_75001	RAL-409_125b
2904	chr4	319948	320012	chr4	328174	328238	Stalker2	10	8224	3.0	4.0	3.5	2.2	8290	chr4	319948	3` UTR	CG32850 +	chr4	324093	intron	CG32850 +	chr4	328238	3` UTR,3` UTR	CG32850 +,PMCA -	chr4_10_320001	chr4_320001	RAL-409_125b
2905	chr4	671582	671628	chr4	680206	680257	Tirant	15	8628	7.0	9.5	8.2	1.6	8675	chr4	671582	intron	CG11360 +	chr4	675920	intron	CG11360 +	chr4	680257	intron	CG11360 +	chr4_15_675001	chr4_675001	RAL-409_125b
2912	chrX	295815	295869	chrX	303485	303524	412	7	7668	5.0	8.5	6.8	0.9	7709	chrX	295815	intron	CG3777 +	chrX	299670	intron	CG3777 +	chrX	303524	intron	CG3777 +	chrX_7_295001	chrX_295001	RAL-409_125b
2913	chrX	318452	318489	chrX	323588	323618	flea	4	5133	4.5	7.5	6.0	0.6	5166	chrX	318452	intron,intron	CG3777 +,CG32816 -	chrX	321035	intron,intron	CG3777 +,CG32816 -	chrX	323618	intron,intron	CG3777 +,CG32816 -	chrX_4_320001	chrX_320001	RAL-409_125b
2915	chrX	428379	428443	chrX	434614	434678	3S18	14	6233	4.0	4.5	4.2	2.7	6299	chrX	428379	intron	CG32816 -	chrX	431528	intron	CG32816 -	chrX	434678	intron	CG32816 -	chrX_14_430001	chrX_430001	RAL-409_125b
2916	chrX	551389	551444	chrX	559001	559056	412	8	7608	5.5	2.5	4.0	1.6	7667	chrX	551389	intron	Appl +	chrX	555222	intron	Appl +	chrX	559056	intron	Appl +	chrX_8_555001	chrX_555001	RAL-409_125b
2920	chrX	827575	827609	chrX	835399	835451	roo	11	7836	6.5	4.5	5.5	1.7	7876	chrX	827575	intron	CG43867 -	chrX	831513	intron	CG43867 -	chrX	835451	intron	CG43867 -	chrX_11_830001	chrX_830001	RAL-409_125b
2921	chrX	906661	906729	chrX	908500	908558	S-element	18	1835	3.0	7.5	5.2	2.9	1897	chrX	906661	intron	CG43867 -	chrX	907610	intron	CG43867 -	chrX	908558	intron	CG43867 -	chrX_18_905001	chrX_905001	RAL-409_125b
2924	chrX	1357731	1357775	chrX	1367951	1367995	Doc	9	10220	8.5	5.5	7.0	1.1	10264	chrX	1357731	intergenic	png -	chrX	1362863	intergenic	not near genes	chrX	1367995	intergenic	not near genes	chrX_9_1360001	chrX_1360001	RAL-409_125b
2930	chrX	1930496	1930557	chrX	1938117	1938178	opus	16	7617	2.5	5.0	3.8	3.3	7682	chrX	1930496	3` UTR	CG11596 +	chrX	1934337	intergenic	not near genes	chrX	1938178	3` UTR	CG3857 -	chrX_16_1930001	chrX_1930001	RAL-409_125b
2931	chrX	1954877	1954919	chrX	1962826	1962848	Stalker2	15	7963	5.0	3.0	4.0	3.0	7971	chrX	1954877	intron	Hr4 +	chrX	1958862	intron	Hr4 +	chrX	1962848	intron	Hr4 +	chrX_15_1955001	chrX_1955001	RAL-409_125b
2933	chrX	2399823	2399855	chrX	2408196	2408205	roo	7	8371	5.0	0.0	2.5	2.0	8382	chrX	2399823	intergenic	not near genes	chrX	2404014	intergenic	not near genes	chrX	2408205	intergenic	not near genes	chrX_7_2400001	chrX_2400001	RAL-409_125b
2936	chrX	2610347	2610407	chrX	2617504	2617574	HMS-Beagle	6	7165	5.0	5.5	5.2	1.0	7227	chrX	2610347	intergenic	CG8636 -	chrX	2613960	intergenic	not near genes	chrX	2617574	intergenic	Tsp3A -	chrX_6_2610001	chrX_2610001	RAL-409_125b
2937	chrX	2664347	2664407	chrX	2665543	2665592	1360	16	1193	3.5	4.0	3.8	3.3	1245	chrX	2664347	intron	sgg +	chrX	2664970	intron	sgg +	chrX	2665592	intron	sgg +	chrX_16_2660001	chrX_2660001	RAL-409_125b
2939	chrX	2823749	2823764	chrX	2832347	2832362	roo	5	8595	11.0	4.5	7.8	0.6	8613	chrX	2823749	intron	kirre +	chrX	2828056	intron	kirre +	chrX	2832362	intron	kirre +	chrX_5_2825001	chrX_2825001	RAL-409_125b
2940	chrX	2823766	2823775	chrX	2832340	2832373	roo	4	8591	9.0	3.0	6.0	0.6	8607	chrX	2823766	intron	kirre +	chrX	2828070	intron	kirre +	chrX	2832373	intron	kirre +	chrX_4_2825001	chrX_2825001	RAL-409_125b
2941	chrX	2844883	2844921	chrX	2852327	2852381	mdg1	13	7457	5.5	4.0	4.8	2.2	7498	chrX	2844883	intron	kirre +	chrX	2848632	intron	kirre +	chrX	2852381	intron	kirre +	chrX_13_2845001	chrX_2845001	RAL-409_125b
2944	chrX	3057987	3058032	chrX	3058273	3058323	pogo	6	290	5.0	2.5	3.8	1.2	336	chrX	3057987	intron	kirre +	chrX	3058155	intron	kirre +	chrX	3058323	intron	kirre +	chrX_6_3055001	chrX_3055001	RAL-409_125b
2950	chrX	3218489	3218510	chrX	3227674	3227709	roo	5	9196	0.0	5.5	2.8	1.3	9220	chrX	3218489	intron	dnc +	chrX	3223099	intron	dnc +	chrX	3227709	intron	dnc +	chrX_5_3220001	chrX_3220001	RAL-409_125b
2956	chrX	3415011	3415042	chrX	3421235	3421277	3S18	11	6229	0.5	5.0	2.8	2.9	6266	chrX	3415011	intron,intron	CR44999 +,CG12535 -	chrX	3418144	intron,intron	CR44999 +,CG12535 -	chrX	3421277	intron,intron	CR44999 +,CG12535 -	chrX_11_3415001	chrX_3415001	RAL-409_125b
2960	chrX	3493056	3493093	chrX	3502265	3502297	roo	5	9208	8.0	4.5	6.2	0.7	9241	chrX	3493056	intron,intron	CR44999 +,Gas8 -	chrX	3497676	intron,intron	CR44999 +,Gas8 -	chrX	3502297	intron,intron	CR44999 +,Gas8 -	chrX_5_3495001	chrX_3495001	RAL-409_125b
2963	chrX	3597511	3597583	chrX	3619729	3619766	roo	8	22206	5.0	4.5	4.8	1.4	22255	chrX	3597511	intron	AstA-R1 +	chrX	3608638	intron	AstA-R1 +	chrX	3619766	intron	AstA-R1 +	chrX_8_3605001	chrX_3605001	RAL-409_125b
2966	chrX	3726728	3726784	chrX	3730169	3730216	NOF	5	3441	3.5	6.5	5.0	0.8	3488	chrX	3726728	intron	tlk +	chrX	3728472	intron	tlk +	chrX	3730216	intron	tlk +	chrX_5_3725001	chrX_3725001	RAL-409_125b
2968	chrX	3842317	3842341	chrX	3842578	3842609	pogo	4	266	8.5	4.5	6.5	0.5	292	chrX	3842317	intron	ec +	chrX	3842463	intron	ec +	chrX	3842609	intron	ec +	chrX_4_3840001	chrX_3840001	RAL-409_125b
2973	chrX	3986865	3986877	chrX	3994505	3994560	412	6	7673	3.5	3.5	3.5	1.3	7695	chrX	3986865	intergenic	not near genes	chrX	3990712	intergenic	not near genes	chrX	3994560	intergenic	not near genes	chrX_6_3990001	chrX_3990001	RAL-409_125b
2976	chrX	4157848	4157920	chrX	4164951	4165022	297	10	7100	3.0	4.5	3.8	2.1	7174	chrX	4157848	intron	Fas2 -	chrX	4161435	intron	Fas2 -	chrX	4165022	intron	Fas2 -	chrX_10_4160001	chrX_4160001	RAL-409_125b
2985	chrX	4700348	4700424	chrX	4700741	4700782	jockey	18	389	2.5	3.0	2.8	4.7	434	chrX	4700348	3` UTR	ctp +	chrX	4700565	3` UTR	ctp +	chrX	4700782	3` UTR	ctp +	chrX_18_4700001	chrX_4700001	RAL-409_125b
2986	chrX	4792352	4792397	chrX	4792835	4792875	jockey	8	481	3.0	5.5	4.2	1.5	523	chrX	4792352	intergenic	not near genes	chrX	4792614	intergenic	not near genes	chrX	4792875	intergenic	not near genes	chrX_8_4790001	chrX_4790001	RAL-409_125b
2987	chrX	4827938	4827967	chrX	4835349	4835380	Stalker4	4	7416	9.5	4.5	7.0	0.5	7442	chrX	4827938	intergenic	not near genes	chrX	4831659	intergenic	not near genes	chrX	4835380	intergenic	not near genes	chrX_4_4830001	chrX_4830001	RAL-409_125b
2988	chrX	4827968	4827995	chrX	4835346	4835389	Stalker4	13	7388	6.0	3.5	4.8	2.2	7421	chrX	4827968	intergenic	not near genes	chrX	4831678	intergenic	not near genes	chrX	4835389	intergenic	not near genes	chrX_13_4830001	chrX_4830001	RAL-409_125b
2993	chrX	4990000	4990057	chrX	4997264	4997321	roo	8	7264	3.5	3.0	3.2	1.9	7321	chrX	4990000	intron	CR44833 -	chrX	4993660	intron	CR44833 -	chrX	4997321	intron	CR44833 -	chrX_8_4990001	chrX_4990001	RAL-409_125b
2995	chrX	5096257	5096303	chrX	5103839	5103915	springer	7	7608	1.0	3.5	2.2	2.2	7658	chrX	5096257	intron,intron	CG15465 +,rg +	chrX	5100086	intron,intron	CG15465 +,rg +	chrX	5103915	intron,intron	CG15465 +,rg +	chrX_7_5100001	chrX_5100001	RAL-409_125b
3001	chrX	5338680	5338726	chrX	5339972	5340001	jockey	10	1292	5.5	5.0	5.2	1.6	1321	chrX	5338680	intergenic	not near genes	chrX	5339340	intergenic	not near genes	chrX	5340001	intergenic	SK +	chrX_10_5335001	chrX_5335001	RAL-409_125b
3005	chrX	5481068	5481070	chrX	5485082	5485091	I-element	5	4019	0.0	8.0	4.0	1.0	4023	chrX	5481068	intron	SPR +	chrX	5483080	intron	SPR +	chrX	5485091	intron	SPR +	chrX_5_5480001	chrX_5480001	RAL-409_125b
3007	chrX	5524803	5524834	chrX	5528716	5528736	412	8	3910	9.0	2.5	5.8	1.2	3933	chrX	5524803	intergenic	snoRNA:Psi28S-3342 -	chrX	5526770	intergenic	not near genes	chrX	5528736	intergenic	Vsx2 -	chrX_8_5525001	chrX_5525001	RAL-409_125b
3009	chrX	5727373	5727415	chrX	5732162	5732204	Doc	14	4787	6.5	6.0	6.2	1.9	4831	chrX	5727373	intron	CG32758 -	chrX	5729788	intron	CG32758 -	chrX	5732204	intron	CG32758 -	chrX_14_5725001	chrX_5725001	RAL-409_125b
3011	chrX	5883765	5883833	chrX	5884056	5884124	pogo	12	285	4.0	4.0	4.0	2.4	359	chrX	5883765	intron	CR45668 -	chrX	5883944	intron	CR45668 -	chrX	5884124	intron	CR45668 -	chrX_12_5880001	chrX_5880001	RAL-409_125b
3012	chrX	5884124	5884182	chrX	5884409	5884468	pogo	9	286	7.5	4.5	6.0	1.3	344	chrX	5884124	intron	CR45668 -	chrX	5884296	intron	CR45668 -	chrX	5884468	intron	CR45668 -	chrX_9_5880001	chrX_5880001	RAL-409_125b
3015	chrX	6171547	6171605	chrX	6179025	6179088	Quasimodo	11	7474	7.0	5.0	6.0	1.6	7541	chrX	6171547	intron	Ca-alpha1T -	chrX	6175318	intron	Ca-alpha1T -	chrX	6179088	intron	Ca-alpha1T -	chrX_11_6175001	chrX_6175001	RAL-409_125b
3018	chrX	6392826	6392883	chrX	6397641	6397698	Doc	16	4812	7.5	3.5	5.5	2.5	4872	chrX	6392826	intergenic	not near genes	chrX	6395262	intergenic	not near genes	chrX	6397698	intergenic	not near genes	chrX_16_6395001	chrX_6395001	RAL-409_125b
3019	chrX	6429975	6429993	chrX	6435483	6435505	Rt1c	4	5506	8.0	7.5	7.8	0.5	5530	chrX	6429975	intron	CG42340 -	chrX	6432740	intron	CG42340 -	chrX	6435505	intron	CG42340 -	chrX_4_6430001	chrX_6430001	RAL-409_125b
3021	chrX	6562787	6562847	chrX	6571314	6571344	Tirant	18	8522	3.5	5.5	4.5	3.3	8557	chrX	6562787	intron	CG34417 +	chrX	6567066	intron	CG34417 +	chrX	6571344	intron	CG34417 +	chrX_18_6565001	chrX_6565001	RAL-409_125b
3023	chrX	6605465	6605498	chrX	6608537	6608565	Burdock	5	3072	1.0	5.5	3.2	1.2	3100	chrX	6605465	intron	pigs +	chrX	6607015	intron	pigs +	chrX	6608565	intron	pigs +	chrX_5_6605001	chrX_6605001	RAL-409_125b
3037	chrX	7023565	7023616	chrX	7031005	7031051	Tabor	14	7437	4.0	6.5	5.2	2.3	7486	chrX	7023565	intron	CG12541 -	chrX	7027308	intron	CG12541 -	chrX	7031051	intron	CG12541 -	chrX_14_7025001	chrX_7025001	RAL-409_125b
3038	chrX	7125229	7125267	chrX	7134428	7134470	roo	4	9201	0.0	14.5	7.2	0.5	9241	chrX	7125229	intergenic	not near genes	chrX	7129850	intergenic	not near genes	chrX	7134470	intergenic	not near genes	chrX_4_7125001	chrX_7125001	RAL-409_125b
3045	chrX	7702869	7702923	chrX	7703356	7703412	jockey	11	488	11.5	7.0	9.2	1.1	543	chrX	7702869	intron	CHES-1-like -	chrX	7703140	intron	CHES-1-like -	chrX	7703412	intron	CHES-1-like -	chrX_11_7700001	chrX_7700001	RAL-409_125b
3046	chrX	7784188	7784252	chrX	7784537	7784604	jockey	4	352	0.0	5.5	2.8	1.1	416	chrX	7784188	intergenic	not near genes	chrX	7784396	intergenic	not near genes	chrX	7784604	intergenic	not near genes	chrX_4_7780001	chrX_7780001	RAL-409_125b
3048	chrX	7845711	7845751	chrX	7847247	7847292	hopper2	7	1540	4.5	4.5	4.5	1.3	1581	chrX	7845711	intergenic	not near genes	chrX	7846502	intergenic	not near genes	chrX	7847292	intergenic	not near genes	chrX_7_7845001	chrX_7845001	RAL-409_125b
3051	chrX	8031403	8031451	chrX	8035762	8035810	Juan	9	4356	3.5	4.5	4.0	1.8	4407	chrX	8031403	intergenic	not near genes	chrX	8033606	intergenic	not near genes	chrX	8035810	3` UTR	CG2233 -	chrX_9_8030001	chrX_8030001	RAL-409_125b
3061	chrX	8922293	8922349	chrX	8922768	8922833	jockey	14	480	5.5	5.0	5.2	2.3	540	chrX	8922293	intron	rdgA +	chrX	8922563	intron	rdgA +	chrX	8922833	intron	rdgA +	chrX_14_8920001	chrX_8920001	RAL-409_125b
3062	chrX	8948713	8948780	chrX	8956272	8956338	roo	15	7558	0.0	4.0	2.0	5.0	7625	chrX	8948713	intron	rdgA +	chrX	8952526	intron	rdgA +	chrX	8956338	intron	rdgA +	chrX_15_8950001	chrX_8950001	RAL-409_125b
3072	chrX	9508109	9508150	chrX	9509672	9509711	jockey	11	1562	7.0	7.0	7.0	1.4	1602	chrX	9508109	intron	CG32700 -	chrX	9508910	intron	CG32700 -	chrX	9509711	intron	CG32700 -	chrX_11_9505001	chrX_9505001	RAL-409_125b
3074	chrX	9575770	9575813	chrX	9576117	9576187	mdg3	10	361	6.0	5.5	5.8	1.5	417	chrX	9575770	intron,exon	CG32699 -,CG42395 -	chrX	9575978	intron,intron	CG32699 -,CG42395 -	chrX	9576187	intron,5` UTR	CG32699 -,CG42395 -	chrX_10_9575001	chrX_9575001	RAL-409_125b
3080	chrX	10138199	10138232	chrX	10145753	10145776	412	5	7550	5.5	1.5	3.5	1.1	7577	chrX	10138199	intron,intron	RhoU +,CR44894 -	chrX	10141988	intron,intron	RhoU +,CR44894 -	chrX	10145776	intron,intron	RhoU +,CR44894 -	chrX_5_10140001	chrX_10140001	RAL-409_125b
3084	chrX	10348761	10348797	chrX	10356376	10356397	springer	5	7605	5.0	3.5	4.2	1.0	7636	chrX	10348761	intergenic	snoRNA:U3:9B +	chrX	10352579	intergenic	not near genes	chrX	10356397	intergenic	l(1)G0289 -	chrX_5_10350001	chrX_10350001	RAL-409_125b
3089	chrX	10525022	10525046	chrX	10532143	10532169	297	6	7117	6.5	3.5	5.0	1.0	7147	chrX	10525022	intron	spri -	chrX	10528596	intron	spri -	chrX	10532169	intron	spri -	chrX_6_10525001	chrX_10525001	RAL-409_125b
3091	chrX	10550817	10550880	chrX	10552334	10552362	hobo	16	1512	3.5	4.0	3.8	3.3	1545	chrX	10550817	intron	spri -	chrX	10551590	intron	spri -	chrX	10552362	intron	spri -	chrX_16_10550001	chrX_10550001	RAL-409_125b
3093	chrX	10686007	10686054	chrX	10691194	10691241	roo	14	5185	7.5	7.0	7.2	1.7	5234	chrX	10686007	intron	X11Lbeta +	chrX	10688624	intron	X11Lbeta +	chrX	10691241	intron	X11Lbeta +	chrX_14_10685001	chrX_10685001	RAL-409_125b
3094	chrX	10772663	10772692	chrX	10772768	10772788	Tirant	5	105	4.0	2.5	3.2	1.2	125	chrX	10772663	intron	CG15211 +	chrX	10772726	intron	CG15211 +	chrX	10772788	intron	CG15211 +	chrX_5_10770001	chrX_10770001	RAL-409_125b
3096	chrX	11095955	11096024	chrX	11103107	11103115	HMS-Beagle	11	7144	1.5	5.0	3.2	2.6	7160	chrX	11095955	intergenic	not near genes	chrX	11099535	intergenic	not near genes	chrX	11103115	intron	CG42249 +	chrX_11_11095001	chrX_11095001	RAL-409_125b
3101	chrX	11268541	11268592	chrX	11270074	11270120	hopper2	11	1532	0.5	5.0	2.8	2.9	1579	chrX	11268541	intron	CG44422 -	chrX	11269330	intron	CG44422 -	chrX	11270120	intron	CG44422 -	chrX_11_11265001	chrX_11265001	RAL-409_125b
3105	chrX	11535001	11535044	chrX	11541521	11541564	Burdock	9	6519	8.5	8.0	8.2	1.0	6563	chrX	11535001	intron	Drak +	chrX	11538282	intron	Drak +	chrX	11541564	intron	Drak +	chrX_9_11535001	chrX_11535001	RAL-409_125b
3107	chrX	11633380	11633426	chrX	11640484	11640530	297	10	7100	6.0	7.0	6.5	1.3	7150	chrX	11633380	intron	Ptp10D +	chrX	11636955	intron	Ptp10D +	chrX	11640530	intron	Ptp10D +	chrX_10_11635001	chrX_11635001	RAL-409_125b
3108	chrX	11645056	11645115	chrX	11648276	11648335	NOF	5	3210	4.5	1.0	2.8	1.3	3279	chrX	11645056	intron	Ptp10D +	chrX	11646696	intron	Ptp10D +	chrX	11648335	intron	Ptp10D +	chrX_5_11645001	chrX_11645001	RAL-409_125b
3116	chrX	12168100	12168143	chrX	12173592	12173619	I-element	6	5487	4.5	3.5	4.0	1.2	5519	chrX	12168100	intron	Ten-a +	chrX	12170860	intron	Ten-a +	chrX	12173619	intron	Ten-a +	chrX_6_12170001	chrX_12170001	RAL-409_125b
3132	chrX	12930566	12930602	chrX	12937727	12937761	HMS-Beagle	9	7160	2.5	8.0	5.2	1.5	7195	chrX	12930566	intron	fne +	chrX	12934164	intron	fne +	chrX	12937761	intron	fne +	chrX_9_12930001	chrX_12930001	RAL-409_125b
3143	chrX	13401444	13401506	chrX	13401846	13401908	jockey	11	400	5.5	4.5	5.0	1.8	464	chrX	13401444	intergenic	CG1673 +,CG12725 -	chrX	13401676	intergenic	CG12725 -,CG1673 +	chrX	13401908	3` UTR	CG12725 -	chrX_11_13400001	chrX_13400001	RAL-409_125b
3144	chrX	13429410	13429474	chrX	13430609	13430673	jockey	6	1199	0.0	4.0	2.0	2.0	1263	chrX	13429410	intergenic	not near genes	chrX	13430042	intergenic	not near genes	chrX	13430673	intergenic	not near genes	chrX_6_13430001	chrX_13430001	RAL-409_125b
3148	chrX	13463602	13463667	chrX	13469229	13469287	mdg3	10	5625	8.0	3.0	5.5	1.5	5685	chrX	13463602	intron	Neto +	chrX	13466444	intron	Neto +	chrX	13469287	intron	Neto +	chrX_10_13465001	chrX_13465001	RAL-409_125b
3157	chrX	13937968	13937988	chrX	13941279	13941279	I-element	5	3310	6.0	7.5	6.8	0.6	3311	chrX	13937968	intron	mamo -	chrX	13939624	intron	mamo -	chrX	13941279	intron	mamo -	chrX_5_13935001	chrX_13935001	RAL-409_125b
3159	chrX	14104993	14105012	chrX	14114194	14114213	roo	10	9198	7.5	5.0	6.2	1.4	9220	chrX	14104993	intergenic	not near genes	chrX	14109603	intergenic	not near genes	chrX	14114213	5` UTR	CR44657 +	chrX_10_14105001	chrX_14105001	RAL-409_125b
3160	chrX	14105026	14105040	chrX	14114185	14114220	roo	5	9183	5.0	4.5	4.8	0.9	9194	chrX	14105026	intergenic	not near genes	chrX	14109623	intergenic	not near genes	chrX	14114220	5` UTR	CR44657 +	chrX_5_14105001	chrX_14105001	RAL-409_125b
3171	chrX	14416269	14416324	chrX	14421087	14421141	F-element	16	4816	3.0	8.5	5.8	2.4	4872	chrX	14416269	intron	dpr8 +	chrX	14418705	intron	dpr8 +	chrX	14421141	intron	dpr8 +	chrX_16_14415001	chrX_14415001	RAL-409_125b
3175	chrX	14636431	14636439	chrX	14641914	14641930	I-element	4	5485	11.5	6.5	9.0	0.4	5499	chrX	14636431	intron	NetA -	chrX	14639180	intron	NetA -	chrX	14641930	intron	NetA -	chrX_4_14635001	chrX_14635001	RAL-409_125b
3176	chrX	14636441	14636483	chrX	14641912	14641959	I-element	6	5478	8.5	6.5	7.5	0.7	5518	chrX	14636441	intron	NetA -	chrX	14639200	intron	NetA -	chrX	14641959	intron	NetA -	chrX_6_14635001	chrX_14635001	RAL-409_125b
3179	chrX	14777993	14778030	chrX	14782840	14782877	Doc	6	4846	7.0	6.5	6.8	0.8	4884	chrX	14777993	intergenic	CG5347 +	chrX	14780435	intergenic	not near genes	chrX	14782877	intergenic	Ag5r2 -	chrX_6_14780001	chrX_14780001	RAL-409_125b
3183	chrX	14818742	14818786	chrX	14823977	14824010	copia	13	5242	4.5	6.5	5.5	2.0	5268	chrX	14818742	intron	rut -	chrX	14821376	intron	rut -	chrX	14824010	intron	rut -	chrX_13_14820001	chrX_14820001	RAL-409_125b
3185	chrX	14936825	14936881	chrX	14946132	14946181	roo	18	9306	6.5	4.5	5.5	2.8	9356	chrX	14936825	intron	pdgy -	chrX	14941503	intron	pdgy -	chrX	14946181	intron	pdgy -	chrX_18_14940001	chrX_14940001	RAL-409_125b
3190	chrX	15273697	15273738	chrX	15274882	15274898	1360	11	1192	5.5	5.5	5.5	1.7	1201	chrX	15273697	intergenic	not near genes	chrX	15274298	intergenic	not near genes	chrX	15274898	intergenic	not near genes	chrX_11_15270001	chrX_15270001	RAL-409_125b
3191	chrX	15413009	15413069	chrX	15417361	15417387	Juan	15	4344	5.5	5.5	5.5	2.3	4378	chrX	15413009	intron	Cngl -	chrX	15415198	intron	Cngl -	chrX	15417387	intron	Cngl -	chrX_15_15415001	chrX_15415001	RAL-409_125b
3203	chrX	16222741	16222745	chrX	16231140	16231145	roo	4	8400	0.0	4.5	2.2	1.2	8404	chrX	16222741	intergenic	not near genes	chrX	16226943	intergenic	not near genes	chrX	16231145	intergenic	not near genes	chrX_4_16225001	chrX_16225001	RAL-409_125b
3204	chrX	16222746	16222804	chrX	16231136	16231173	roo	16	8395	0.0	3.5	1.8	5.7	8427	chrX	16222746	intergenic	not near genes	chrX	16226960	intergenic	not near genes	chrX	16231173	intergenic	not near genes	chrX_16_16225001	chrX_16225001	RAL-409_125b
3207	chrX	16340619	16340688	chrX	16349824	16349895	roo	11	9205	2.5	1.0	1.8	3.9	9276	chrX	16340619	3` UTR	Dsp1 +	chrX	16345257	intergenic	not near genes	chrX	16349895	intergenic	sl +	chrX_11_16345001	chrX_16345001	RAL-409_125b
3208	chrX	16492612	16492650	chrX	16498238	16498274	mdg3	17	5626	9.0	5.5	7.2	2.1	5662	chrX	16492612	intron	para -	chrX	16495443	intron	para -	chrX	16498274	exon	para -	chrX_17_16495001	chrX_16495001	RAL-409_125b
3215	chrX	16935963	16936027	chrX	16936431	16936488	jockey	10	466	3.0	4.0	3.5	2.2	525	chrX	16935963	intron	CG4928 +	chrX	16936226	intron	CG4928 +	chrX	16936488	intron	CG4928 +	chrX_10_16935001	chrX_16935001	RAL-409_125b
3220	chrX	17195173	17195229	chrX	17200292	17200349	flea	14	5129	7.0	6.0	6.5	1.9	5176	chrX	17195173	3` UTR	baz +	chrX	17197761	3` UTR	baz +	chrX	17200349	3` UTR	baz +	chrX_14_17195001	chrX_17195001	RAL-409_125b
3242	chrX	17792936	17792968	chrX	17796273	17796274	flea	4	3332	4.5	3.0	3.8	0.8	3338	chrX	17792936	intron	OdsH +	chrX	17794605	intron	OdsH +	chrX	17796274	intron	OdsH +	chrX_4_17790001	chrX_17790001	RAL-409_125b
3250	chrX	18194038	18194090	chrX	18194612	18194664	BS	13	581	5.0	5.5	5.2	2.1	626	chrX	18194038	intron	Frq2 +	chrX	18194351	intron	Frq2 +	chrX	18194664	intron	Frq2 +	chrX_13_18190001	chrX_18190001	RAL-409_125b
3256	chrX	18429457	18429517	chrX	18434818	18434878	Transpac	15	5357	4.0	7.0	5.5	2.3	5421	chrX	18429457	intergenic	not near genes	chrX	18432168	intergenic	not near genes	chrX	18434878	intergenic	not near genes	chrX_15_18430001	chrX_18430001	RAL-409_125b
3264	chrX	18754290	18754338	chrX	18758002	18758049	297	4	3711	3.0	4.0	3.5	0.9	3759	chrX	18754290	intergenic	not near genes	chrX	18756170	intergenic	not near genes	chrX	18758049	intergenic	not near genes	chrX_4_18755001	chrX_18755001	RAL-409_125b
3272	chrX	19060373	19060429	chrX	19065197	19065262	Doc	9	4831	6.0	7.5	6.8	1.2	4889	chrX	19060373	intron	CG14190 +	chrX	19062818	intron	CG14190 +	chrX	19065262	intron	CG14190 +	chrX_9_19060001	chrX_19060001	RAL-409_125b
3279	chrX	19136508	19136582	chrX	19143478	19143536	412	8	6958	4.0	0.0	2.0	2.7	7028	chrX	19136508	intergenic	not near genes	chrX	19140022	intergenic	not near genes	chrX	19143536	3` UTR	RhoGAP18B -	chrX_8_19140001	chrX_19140001	RAL-409_125b
3287	chrX	19356959	19357018	chrX	19358440	19358527	NOF	7	1504	3.5	0.0	1.8	2.5	1568	chrX	19356959	intron	kek5 +	chrX	19357743	intron	kek5 +	chrX	19358527	intron	kek5 +	chrX_7_19355001	chrX_19355001	RAL-409_125b
3288	chrX	19380115	19380182	chrX	19380406	19380468	pogo	17	288	6.5	6.0	6.2	2.4	353	chrX	19380115	intron	kek5 +	chrX	19380292	intron	kek5 +	chrX	19380468	intron	kek5 +	chrX_17_19380001	chrX_19380001	RAL-409_125b
3291	chrX	19472087	19472155	chrX	19472707	19472744	jockey	7	606	2.5	5.0	3.8	1.5	657	chrX	19472087	intergenic	kek5 +	chrX	19472416	intergenic	not near genes	chrX	19472744	intergenic	not near genes	chrX_7_19470001	chrX_19470001	RAL-409_125b
3295	chrX	19797305	19797319	chrX	19804671	19804681	Stalker4	5	7366	9.0	4.0	6.5	0.7	7376	chrX	19797305	intergenic	not near genes	chrX	19800993	intergenic	not near genes	chrX	19804681	intergenic	not near genes	chrX_5_19800001	chrX_19800001	RAL-409_125b
3310	chrX	20377273	20377341	chrX	20378790	20378833	hobo	7	1509	4.5	8.0	6.2	1.0	1560	chrX	20377273	intergenic	not near genes	chrX	20378053	intergenic	not near genes	chrX	20378833	intergenic	not near genes	chrX_7_20375001	chrX_20375001	RAL-409_125b
3316	chrX	20504097	20504152	chrX	20505668	20505707	transib2	14	1564	5.5	4.5	5.0	2.3	1610	chrX	20504097	intron	RhoGAP19D -	chrX	20504902	intron	RhoGAP19D -	chrX	20505707	intron	RhoGAP19D -	chrX_14_20500001	chrX_20500001	RAL-409_125b
3322	chrX	20836688	20836749	chrX	20844335	20844401	roo	14	7650	2.0	4.5	3.2	3.3	7713	chrX	20836688	intron	shakB -	chrX	20840544	intron	shakB -	chrX	20844401	intron	shakB -	chrX_14_20840001	chrX_20840001	RAL-409_125b
3323	chrX	20940686	20940727	chrX	20942202	20942229	hobo	11	1515	6.5	3.5	5.0	1.8	1543	chrX	20940686	intergenic	not near genes	chrX	20941458	intergenic	not near genes	chrX	20942229	intergenic	not near genes	chrX_11_20940001	chrX_20940001	RAL-409_125b
3328	chrX	21061828	21061889	chrX	21062352	21062414	roo	8	531	5.0	5.5	5.2	1.3	586	chrX	21061828	intron	bves +	chrX	21062121	intron	bves +	chrX	21062414	intron,3` UTR	bves +,CG32512 -	chrX_8_21060001	chrX_21060001	RAL-409_125b
3332	chrX	21086089	21086153	chrX	21087168	21087232	jockey	13	1076	6.0	8.5	7.2	1.6	1143	chrX	21086089	intergenic	not near genes	chrX	21086660	intergenic	not near genes	chrX	21087232	intergenic	not near genes	chrX_13_21085001	chrX_21085001	RAL-409_125b
3338	chrX	21458640	21458708	chrX	21464126	21464194	Ivk	10	5486	4.5	2.0	3.2	2.4	5554	chrX	21458640	intergenic	not near genes	chrX	21461417	intergenic	not near genes	chrX	21464194	intergenic	not near genes	chrX_10_21460001	chrX_21460001	RAL-409_125b
3350	chrX	22697468	22697511	chrX	22701815	22701858	Juan	14	4345	6.5	8.0	7.2	1.7	4390	chrX	22697468	intron	CR44997 +	chrX	22699663	intron	CR44997 +	chrX	22701858	intron	CR44997 +	chrX_14_22695001	chrX_22695001	RAL-409_125b
3352	chrX	22771463	22771521	chrX	22774799	22774842	297	13	3330	8.0	7.0	7.5	1.5	3379	chrX	22771463	intron	CR44997 +	chrX	22773152	intron	CR44997 +	chrX	22774842	intron	CR44997 +	chrX_13_22770001	chrX_22770001	RAL-409_125b
3355	chrX	22811956	22811980	chrX	22816778	22816802	F-element	4	4820	6.5	5.5	6.0	0.6	4846	chrX	22811956	intergenic	CG12446 -	chrX	22814379	intergenic	not near genes	chrX	22816802	intergenic	not near genes	chrX_4_22810001	chrX_22810001	RAL-409_125b
3359	chrX	22987084	22987123	chrX	22989768	22989830	Burdock	13	2706	6.0	3.5	4.8	2.2	2746	chrX	22987084	intron,intron	stnA -,stnB -	chrX	22988457	intron,intron	stnA -,stnB -	chrX	22989830	intron,intron	stnA -,stnB -	chrX_13_22985001	chrX_22985001	RAL-409_125b
3360	chrX	22996273	22996329	chrX	23003559	23003608	roo	18	7283	4.5	6.5	5.5	2.8	7335	chrX	22996273	intron,intron	stnA -,stnB -	chrX	22999940	intron,intron	stnA -,stnB -	chrX	23003608	intron,intron	stnA -,stnB -	chrX_18_22995001	chrX_22995001	RAL-409_125b