SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 47425 47476 chr2L 52569 52615 jockey 21 5148 6.0 5.5 5.8 3.1 5190 chr2L 47425 intron Cda5 - chr2L 50020 intron Cda5 - chr2L 52615 intron Cda5 - chr2L_21_50001 chr2L_50001 RAL-409_125b 2 chr2L 80140 80172 chr2L 80266 80308 4 126 20.0 18.0 19.0 0.2 168 chr2L 80140 intergenic not near genes chr2L 80224 intergenic not near genes chr2L 80308 intergenic not near genes chr2L_4_80001 chr2L_80001 RAL-409_125b 3 chr2L 263269 263316 chr2L 263460 263512 13 191 2.0 5.5 3.8 2.7 243 chr2L 263269 intron,3` UTR CG3645 -,CG17075 - chr2L 263390 intron,3` UTR CG3645 -,CG17075 - chr2L 263512 intron,3` UTR CG3645 -,CG17075 - chr2L_13_260001 chr2L_260001 RAL-409_125b 4 chr2L 297650 297717 chr2L 297800 297855 14 136 8.0 7.5 7.8 1.6 205 chr2L 297650 intergenic Hop +,Pi3K21B + chr2L 297752 intergenic Pi3K21B +,Hop + chr2L 297855 intergenic Pi3K21B +,Hop + chr2L_14_295001 chr2L_295001 RAL-409_125b 5 chr2L 325096 325144 chr2L 325223 325245 27 119 8.0 5.0 6.5 3.6 149 chr2L 325096 intron Plc21C + chr2L 325170 intron Plc21C + chr2L 325245 intron Plc21C + chr2L_27_325001 chr2L_325001 RAL-409_125b 6 chr2L 347846 347894 chr2L 355396 355438 blood 13 7547 6.0 4.0 5.0 2.2 7592 chr2L 347846 3` UTR Plc21C + chr2L 351642 intron Plc21C + chr2L 355438 3` UTR Plc21C + chr2L_13_350001 chr2L_350001 RAL-409_125b 7 chr2L 407905 407921 chr2L 408036 408046 4 130 11.0 8.0 9.5 0.4 141 chr2L 407905 3` UTR RpI135 + chr2L 407976 intergenic RpI135 +,AP-2alpha - chr2L 408046 3` UTR AP-2alpha - chr2L_4_405001 chr2L_405001 RAL-409_125b 8 chr2L 407948 407969 chr2L 408034 408099 6 123 5.5 8.0 6.8 0.8 151 chr2L 407948 3` UTR RpI135 + chr2L 408024 intergenic AP-2alpha -,RpI135 + chr2L 408099 3` UTR AP-2alpha - chr2L_6_405001 chr2L_405001 RAL-409_125b 9 chr2L 459374 459386 chr2L 459488 459501 5 115 16.0 9.0 12.5 0.4 127 chr2L 459374 3` UTR CG4297 - chr2L 459438 3` UTR CG4297 - chr2L 459501 3` UTR CG4297 - chr2L_5_455001 chr2L_455001 RAL-409_125b 10 chr2L 459387 459422 chr2L 459479 459552 17 120 9.5 10.0 9.8 1.6 165 chr2L 459387 3` UTR CG4297 - chr2L 459470 3` UTR CG4297 - chr2L 459552 3` UTR CG4297 - chr2L_17_455001 chr2L_455001 RAL-409_125b 11 chr2L 467320 467347 chr2L 467469 467489 10 148 11.0 11.5 11.2 0.8 169 chr2L 467320 intron CG4297 - chr2L 467404 intron CG4297 - chr2L 467489 intron CG4297 - chr2L_10_465001 chr2L_465001 RAL-409_125b 12 chr2L 634951 635001 chr2L 635087 635123 11 133 4.5 7.0 5.8 1.6 172 chr2L 634951 intergenic not near genes chr2L 635037 intergenic not near genes chr2L 635123 intergenic not near genes chr2L_11_635001 chr2L_635001 RAL-409_125b 13 chr2L 635234 635256 chr2L 635684 635720 5 457 4.5 7.0 5.8 0.7 486 chr2L 635234 intergenic not near genes chr2L 635477 intergenic not near genes chr2L 635720 intergenic not near genes chr2L_5_635001 chr2L_635001 RAL-409_125b 14 chr2L 666245 666305 chr2L 666356 666450 12 124 3.0 1.5 2.2 3.8 205 chr2L 666245 intron ds - chr2L 666348 intron ds - chr2L 666450 intron ds - chr2L_12_665001 chr2L_665001 RAL-409_125b 15 chr2L 680695 680707 chr2L 680897 680910 4 204 5.5 4.0 4.8 0.7 215 chr2L 680695 intron ds - chr2L 680802 intron ds - chr2L 680910 intron ds - chr2L_4_680001 chr2L_680001 RAL-409_125b 16 chr2L 686913 686939 chr2L 695988 696029 roo 8 9086 5.5 5.0 5.2 1.3 9116 chr2L 686913 intron ds - chr2L 691471 intron ds - chr2L 696029 intron ds - chr2L_8_690001 chr2L_690001 RAL-409_125b 17 chr2L 736831 736899 chr2L 736986 737054 13 154 6.0 5.0 5.5 2.0 223 chr2L 736831 intergenic Eaat2 - chr2L 736942 intergenic Eaat2 - chr2L 737054 intergenic Eaat2 - chr2L_13_735001 chr2L_735001 RAL-409_125b 18 chr2L 763570 763620 chr2L 763675 763746 10 107 4.5 2.5 3.5 2.2 176 chr2L 763570 intergenic not near genes chr2L 763658 intergenic not near genes chr2L 763746 intergenic not near genes chr2L_10_760001 chr2L_760001 RAL-409_125b 19 chr2L 770434 770482 chr2L 772246 772298 Bari1 18 1820 6.5 4.5 5.5 2.8 1864 chr2L 770434 intergenic not near genes chr2L 771366 intergenic not near genes chr2L 772298 intergenic CR44614 + chr2L_18_770001 chr2L_770001 RAL-409_125b 20 chr2L 877804 877818 chr2L 877935 877944 4 130 10.0 5.5 7.8 0.5 140 chr2L 877804 3` UTR,exon CG15824 -,ninaA + chr2L 877874 3` UTR,intron CG15824 -,ninaA + chr2L 877944 3` UTR,intron CG15824 -,ninaA + chr2L_4_875001 chr2L_875001 RAL-409_125b 21 chr2L 877821 877875 chr2L 877931 877991 7 124 8.0 5.5 6.8 0.9 170 chr2L 877821 3` UTR,exon CG15824 -,ninaA + chr2L 877906 3` UTR,intron CG15824 -,ninaA + chr2L 877991 3` UTR,exon CG15824 -,ninaA + chr2L_7_875001 chr2L_875001 RAL-409_125b 22 chr2L 892356 892415 chr2L 892522 892580 8 163 6.0 6.0 6.0 1.1 224 chr2L 892356 intergenic not near genes chr2L 892468 intergenic not near genes chr2L 892580 intergenic not near genes chr2L_8_890001 chr2L_890001 RAL-409_125b 23 chr2L 919903 919917 chr2L 920006 920043 6 120 4.5 0.0 2.2 1.9 140 chr2L 919903 intergenic not near genes chr2L 919973 intergenic not near genes chr2L 920043 intergenic not near genes chr2L_6_915001 chr2L_915001 RAL-409_125b 24 chr2L 922424 922496 chr2L 922544 922602 14 121 4.0 4.5 4.2 2.7 178 chr2L 922424 intergenic CG4341 + chr2L 922513 intergenic CG4341 + chr2L 922602 intergenic CG4341 + chr2L_14_920001 chr2L_920001 RAL-409_125b 25 chr2L 931619 931668 chr2L 931738 931739 10 116 7.0 9.0 8.0 1.1 120 chr2L 931619 intron CG4341 + chr2L 931679 intron CG4341 + chr2L 931739 intron CG4341 + chr2L_10_930001 chr2L_930001 RAL-409_125b 26 chr2L 936499 936540 chr2L 936673 936704 10 170 5.5 0.5 3.0 2.5 205 chr2L 936499 intron CG4341 + chr2L 936602 intron CG4341 + chr2L 936704 intron CG4341 + chr2L_10_935001 chr2L_935001 RAL-409_125b 27 chr2L 950276 950326 chr2L 950406 950461 4 132 19.0 26.0 22.5 0.2 185 chr2L 950276 intron CG4341 + chr2L 950368 intron CG4341 + chr2L 950461 intron CG4341 + chr2L_4_950001 chr2L_950001 RAL-409_125b 28 chr2L 953455 953521 chr2L 953580 953653 17 126 5.5 6.5 6.0 2.4 198 chr2L 953455 exon CG4341 + chr2L 953554 intron CG4341 + chr2L 953653 intron CG4341 + chr2L_17_950001 chr2L_950001 RAL-409_125b 29 chr2L 964506 964570 chr2L 964640 964689 20 130 5.5 8.0 6.8 2.6 183 chr2L 964506 intergenic not near genes chr2L 964598 intergenic not near genes chr2L 964689 intergenic not near genes chr2L_20_960001 chr2L_960001 RAL-409_125b 30 chr2L 976712 976777 chr2L 976833 976903 14 121 4.0 1.5 2.8 3.7 191 chr2L 976712 intergenic not near genes chr2L 976808 intergenic not near genes chr2L 976903 intergenic not near genes chr2L_14_975001 chr2L_975001 RAL-409_125b 31 chr2L 976831 976913 chr2L 984517 984580 roo 10 7682 0.5 3.5 2.0 3.3 7749 chr2L 976831 intergenic not near genes chr2L 980706 intergenic not near genes chr2L 984580 intergenic not near genes chr2L_10_980001 chr2L_980001 RAL-409_125b 32 chr2L 1019405 1019480 chr2L 1019539 1019607 15 124 8.0 6.5 7.2 1.8 202 chr2L 1019405 intron IA-2 - chr2L 1019506 intron IA-2 - chr2L 1019607 intron IA-2 - chr2L_15_1015001 chr2L_1015001 RAL-409_125b 33 chr2L 1025079 1025115 chr2L 1025202 1025245 7 123 6.0 5.0 5.5 1.1 166 chr2L 1025079 intron IA-2 - chr2L 1025162 intron IA-2 - chr2L 1025245 intron IA-2 - chr2L_7_1025001 chr2L_1025001 RAL-409_125b 34 chr2L 1028829 1028873 chr2L 1028942 1028992 7 120 5.5 2.5 4.0 1.4 163 chr2L 1028829 intron IA-2 - chr2L 1028910 intron IA-2 - chr2L 1028992 intron IA-2 - chr2L_7_1025001 chr2L_1025001 RAL-409_125b 35 chr2L 1041756 1041796 chr2L 1041889 1041907 4 130 10.5 11.0 10.8 0.3 151 chr2L 1041756 intron IA-2 - chr2L 1041832 intron IA-2 - chr2L 1041907 intron IA-2 - chr2L_4_1040001 chr2L_1040001 RAL-409_125b 36 chr2L 1090336 1090370 chr2L 1090471 1090510 7 139 0.0 3.5 1.8 2.5 174 chr2L 1090336 intron CG4629 - chr2L 1090423 intron CG4629 - chr2L 1090510 intron CG4629 - chr2L_7_1090001 chr2L_1090001 RAL-409_125b 37 chr2L 1156828 1156889 chr2L 1156971 1157026 13 148 8.0 10.0 9.0 1.3 198 chr2L 1156828 intron capt - chr2L 1156927 intron capt - chr2L 1157026 intron capt - chr2L_13_1155001 chr2L_1155001 RAL-409_125b 38 chr2L 1220100 1220157 chr2L 1227600 1227649 blood 12 7511 4.0 2.5 3.2 2.9 7549 chr2L 1220100 intron CG42329 + chr2L 1223874 intron CG42329 + chr2L 1227649 intron CG42329 + chr2L_12_1220001 chr2L_1220001 RAL-409_125b 39 chr2L 1244365 1244425 chr2L 1244492 1244547 12 126 4.5 5.0 4.8 2.1 182 chr2L 1244365 intergenic not near genes chr2L 1244456 intergenic not near genes chr2L 1244547 intergenic not near genes chr2L_12_1240001 chr2L_1240001 RAL-409_125b 40 chr2L 1261139 1261258 chr2L 1261256 1261388 4 117 0.5 0.5 0.5 2.7 249 chr2L 1261139 intron robo3 + chr2L 1261264 intron robo3 + chr2L 1261388 intron robo3 + chr2L_4_1260001 chr2L_1260001 RAL-409_125b 41 chr2L 1322005 1322043 chr2L 1322119 1322179 9 133 6.0 1.5 3.8 1.9 174 chr2L 1322005 intergenic not near genes chr2L 1322092 intergenic not near genes chr2L 1322179 intergenic not near genes chr2L_9_1320001 chr2L_1320001 RAL-409_125b 42 chr2L 1458212 1458236 chr2L 1458339 1458356 6 123 9.5 13.0 11.2 0.5 144 chr2L 1458212 intergenic not near genes chr2L 1458284 intergenic not near genes chr2L 1458356 intergenic not near genes chr2L_6_1455001 chr2L_1455001 RAL-409_125b 43 chr2L 1491509 1491559 chr2L 1491645 1491688 10 123 7.5 4.0 5.8 1.5 179 chr2L 1491509 intergenic not near genes chr2L 1491598 intergenic not near genes chr2L 1491688 intergenic not near genes chr2L_10_1490001 chr2L_1490001 RAL-409_125b 44 chr2L 1491560 1491579 chr2L 1491644 1491667 4 102 6.5 4.0 5.2 0.6 107 chr2L 1491560 intergenic not near genes chr2L 1491614 intergenic not near genes chr2L 1491667 intergenic not near genes chr2L_4_1490001 chr2L_1490001 RAL-409_125b 45 chr2L 1570662 1570715 chr2L 1573561 1573637 F-element 11 2917 6.5 5.0 5.8 1.6 2975 chr2L 1570662 intron haf + chr2L 1572150 intron haf + chr2L 1573637 intron haf + chr2L_11_1570001 chr2L_1570001 RAL-409_125b 46 chr2L 1590918 1590984 chr2L 1591044 1591108 18 118 6.5 3.5 5.0 3.0 190 chr2L 1590918 intron haf + chr2L 1591013 intron haf + chr2L 1591108 intron haf + chr2L_18_1590001 chr2L_1590001 RAL-409_125b 47 chr2L 1628791 1628854 chr2L 1628930 1628963 10 135 6.0 6.0 6.0 1.4 172 chr2L 1628791 intergenic not near genes chr2L 1628877 intergenic not near genes chr2L 1628963 intergenic not near genes chr2L_10_1625001 chr2L_1625001 RAL-409_125b 48 chr2L 1634718 1634755 chr2L 1634853 1634890 8 134 6.5 7.0 6.8 1.0 172 chr2L 1634718 intergenic not near genes chr2L 1634804 intergenic not near genes chr2L 1634890 intergenic not near genes chr2L_8_1630001 chr2L_1630001 RAL-409_125b 49 chr2L 1635393 1635432 chr2L 1635583 1635606 12 186 2.0 12.5 7.2 1.5 213 chr2L 1635393 intergenic not near genes chr2L 1635500 intergenic not near genes chr2L 1635606 intergenic not near genes chr2L_12_1635001 chr2L_1635001 RAL-409_125b 50 chr2L 1678931 1679000 chr2L 1686446 1686513 blood 18 7512 5.0 5.5 5.2 2.9 7582 chr2L 1678931 intron chinmo + chr2L 1682722 intron chinmo + chr2L 1686513 intron chinmo + chr2L_18_1680001 chr2L_1680001 RAL-409_125b 51 chr2L 1711313 1711389 chr2L 1711687 1711713 mdg3 14 359 2.5 5.0 3.8 2.9 400 chr2L 1711313 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711513 3` UTR frtz - chr2L 1711713 3` UTR frtz - chr2L_14_1710001 chr2L_1710001 RAL-409_125b 52 chr2L 1721817 1721837 chr2L 1721940 1721970 8 129 1.0 13.5 7.2 1.0 153 chr2L 1721817 intron Rim2 - chr2L 1721894 intron Rim2 - chr2L 1721970 intron Rim2 - chr2L_8_1720001 chr2L_1720001 RAL-409_125b 53 chr2L 1724776 1724811 chr2L 1724898 1724943 8 131 4.5 5.0 4.8 1.4 167 chr2L 1724776 3` UTR Eno - chr2L 1724860 3` UTR Eno - chr2L 1724943 3` UTR Eno - chr2L_8_1720001 chr2L_1720001 RAL-409_125b 54 chr2L 1879529 1879575 chr2L 1879721 1879748 11 187 3.5 1.0 2.2 3.4 219 chr2L 1879529 intron CG31663 - chr2L 1879638 intron CG31663 - chr2L 1879748 intron CG31663 - chr2L_11_1875001 chr2L_1875001 RAL-409_125b 55 chr2L 1887756 1887822 chr2L 1887878 1887950 16 117 3.0 7.5 5.2 2.6 194 chr2L 1887756 intron CG7337 + chr2L 1887853 intron CG7337 + chr2L 1887950 intron CG7337 + chr2L_16_1885001 chr2L_1885001 RAL-409_125b 56 chr2L 2007801 2007867 chr2L 2007959 2008025 13 157 4.0 10.5 7.2 1.6 224 chr2L 2007801 intergenic CR45712 + chr2L 2007913 intergenic CR45712 +,Nplp4 + chr2L 2008025 intergenic CR45712 +,Nplp4 + chr2L_13_2005001 chr2L_2005001 RAL-409_125b 57 chr2L 2022696 2022744 chr2L 2022807 2022842 4 110 9.5 6.5 8.0 0.4 146 chr2L 2022696 intron CG4238 + chr2L 2022769 intron CG4238 + chr2L 2022842 intron CG4238 + chr2L_4_2020001 chr2L_2020001 RAL-409_125b 58 chr2L 2084479 2084557 chr2L 2084608 2084651 15 117 2.0 3.0 2.5 4.3 172 chr2L 2084479 intron dpr3 - chr2L 2084565 intron dpr3 - chr2L 2084651 intron dpr3 - chr2L_15_2080001 chr2L_2080001 RAL-409_125b 59 chr2L 2100380 2100397 chr2L 2109554 2109591 roo 4 9191 8.0 8.5 8.2 0.4 9211 chr2L 2100380 intron dpr3 - chr2L 2104986 intron dpr3 - chr2L 2109591 intron dpr3 - chr2L_4_2100001 chr2L_2100001 RAL-409_125b 60 chr2L 2112074 2112141 chr2L 2119774 2119803 opus 5 7679 2.0 6.5 4.2 1.0 7729 chr2L 2112074 intergenic not near genes chr2L 2115938 intergenic not near genes chr2L 2119803 intergenic not near genes chr2L_5_2115001 chr2L_2115001 RAL-409_125b 61 chr2L 2250368 2250427 chr2L 2251184 2251221 8 809 6.0 0.0 3.0 2.0 853 chr2L 2250368 intergenic Ser12 - chr2L 2250794 exon Ser12 - chr2L 2251221 exon Ser12 - chr2L_8_2250001 chr2L_2250001 RAL-409_125b 62 chr2L 2256432 2256468 chr2L 2256556 2256596 6 127 3.5 4.5 4.0 1.2 164 chr2L 2256432 intergenic not near genes chr2L 2256514 intergenic not near genes chr2L 2256596 intergenic not near genes chr2L_6_2255001 chr2L_2255001 RAL-409_125b 63 chr2L 2260766 2260826 chr2L 2260902 2260946 9 131 8.0 9.0 8.5 0.9 180 chr2L 2260766 intergenic not near genes chr2L 2260856 intergenic not near genes chr2L 2260946 intergenic not near genes chr2L_9_2260001 chr2L_2260001 RAL-409_125b 64 chr2L 2294040 2294070 chr2L 2299250 2299309 copia 11 5225 4.0 2.5 3.2 2.6 5269 chr2L 2294040 intergenic not near genes chr2L 2296674 intergenic not near genes chr2L 2299309 intergenic not near genes chr2L_11_2295001 chr2L_2295001 RAL-409_125b 65 chr2L 2303502 2303526 chr2L 2303600 2303644 5 119 5.0 5.5 5.2 0.8 142 chr2L 2303502 intergenic not near genes chr2L 2303573 intergenic not near genes chr2L 2303644 intergenic not near genes chr2L_5_2300001 chr2L_2300001 RAL-409_125b 66 chr2L 2317551 2317616 chr2L 2317678 2317718 15 119 11.0 11.0 11.0 1.2 167 chr2L 2317551 intron,intron CG9967 -,eys + chr2L 2317634 intron,intron CG9967 -,eys + chr2L 2317718 intron,intron CG9967 -,eys + chr2L_15_2315001 chr2L_2315001 RAL-409_125b 67 chr2L 2427335 2427389 chr2L 2427466 2427520 9 132 8.5 4.0 6.2 1.2 185 chr2L 2427335 3` UTR CR44912 - chr2L 2427428 3` UTR CR44912 - chr2L 2427520 3` UTR CR44912 - chr2L_9_2425001 chr2L_2425001 RAL-409_125b 68 chr2L 2480981 2481020 chr2L 2481162 2481235 7 196 6.5 7.0 6.8 0.9 254 chr2L 2480981 intergenic not near genes chr2L 2481108 intergenic not near genes chr2L 2481235 intergenic not near genes chr2L_7_2480001 chr2L_2480001 RAL-409_125b 69 chr2L 2503879 2503962 chr2L 2504049 2504117 8 164 4.5 10.5 7.5 0.9 238 chr2L 2503879 intergenic not near genes chr2L 2503998 intergenic not near genes chr2L 2504117 intergenic not near genes chr2L_8_2500001 chr2L_2500001 RAL-409_125b 70 chr2L 2565506 2565547 chr2L 2571629 2571670 297 10 6121 3.5 8.0 5.8 1.5 6164 chr2L 2565506 exon Cyp309a2 - chr2L 2568588 intron Cyp309a2 - chr2L 2571670 exon Cyp309a2 - chr2L_10_2565001 chr2L_2565001 RAL-409_125b 71 chr2L 2617994 2618049 chr2L 2618123 2618137 11 125 4.5 2.0 3.2 2.6 143 chr2L 2617994 intergenic not near genes chr2L 2618066 intergenic not near genes chr2L 2618137 intergenic not near genes chr2L_11_2615001 chr2L_2615001 RAL-409_125b 72 chr2L 2632445 2632505 chr2L 2632571 2632594 18 119 10.0 5.0 7.5 2.1 149 chr2L 2632445 intergenic not near genes chr2L 2632520 intergenic not near genes chr2L 2632594 intergenic not near genes chr2L_18_2630001 chr2L_2630001 RAL-409_125b 73 chr2L 2661155 2661225 chr2L 2663043 2663064 I-element 11 1861 1.5 6.0 3.8 2.3 1909 chr2L 2661155 intergenic not near genes chr2L 2662110 intergenic not near genes chr2L 2663064 intergenic not near genes chr2L_11_2660001 chr2L_2660001 RAL-409_125b 74 chr2L 2698853 2698888 chr2L 2698967 2699025 8 125 1.5 4.5 3.0 2.0 172 chr2L 2698853 intron CG31690 + chr2L 2698939 intron CG31690 + chr2L 2699025 intron CG31690 + chr2L_8_2695001 chr2L_2695001 RAL-409_125b 75 chr2L 2702933 2703006 chr2L 2703184 2703229 16 234 7.5 6.0 6.8 2.1 296 chr2L 2702933 intron CG31690 + chr2L 2703081 intron CG31690 + chr2L 2703229 intron CG31690 + chr2L_16_2700001 chr2L_2700001 RAL-409_125b 76 chr2L 2724382 2724431 chr2L 2724508 2724557 6 125 3.5 8.0 5.8 0.9 175 chr2L 2724382 intergenic not near genes chr2L 2724470 intergenic not near genes chr2L 2724557 intergenic not near genes chr2L_6_2720001 chr2L_2720001 RAL-409_125b 77 chr2L 2772580 2772622 chr2L 2779209 2779241 297 13 6628 3.5 5.0 4.2 2.5 6661 chr2L 2772580 3` UTR Syt1 - chr2L 2775910 intron Syt1 - chr2L 2779241 3` UTR Syt1 - chr2L_13_2775001 chr2L_2775001 RAL-409_125b 78 chr2L 2800560 2800573 chr2L 2800693 2800706 6 132 10.0 3.0 6.5 0.8 146 chr2L 2800560 intergenic not near genes chr2L 2800633 intergenic not near genes chr2L 2800706 intergenic not near genes chr2L_6_2800001 chr2L_2800001 RAL-409_125b 79 chr2L 2864285 2864309 chr2L 2864910 2864959 6 625 10.5 3.5 7.0 0.8 674 chr2L 2864285 intron CG2991 + chr2L 2864622 intron CG2991 + chr2L 2864959 intron CG2991 + chr2L_6_2860001 chr2L_2860001 RAL-409_125b 80 chr2L 2885338 2885393 chr2L 2885460 2885520 15 124 2.5 5.5 4.0 3.0 182 chr2L 2885338 intron NTPase - chr2L 2885429 intron NTPase - chr2L 2885520 intron NTPase - chr2L_15_2885001 chr2L_2885001 RAL-409_125b 81 chr2L 2927943 2927968 chr2L 2928040 2928104 9 123 8.0 9.5 8.8 0.9 161 chr2L 2927943 intron lilli + chr2L 2928024 intron lilli + chr2L 2928104 intron lilli + chr2L_9_2925001 chr2L_2925001 RAL-409_125b 82 chr2L 2933271 2933324 chr2L 2935488 2935540 pogo 7 2221 5.0 6.5 5.8 1.0 2269 chr2L 2933271 intron lilli + chr2L 2934406 intron lilli + chr2L 2935540 intron lilli + chr2L_7_2930001 chr2L_2930001 RAL-409_125b 83 chr2L 2937372 2937420 chr2L 2937500 2937543 12 125 8.0 3.5 5.8 1.8 171 chr2L 2937372 intron lilli + chr2L 2937458 intron lilli + chr2L 2937543 intron lilli + chr2L_12_2935001 chr2L_2935001 RAL-409_125b 84 chr2L 3072995 3073057 chr2L 3078248 3078300 copia 10 5250 6.0 6.5 6.2 1.4 5305 chr2L 3072995 intron toc - chr2L 3075648 intron toc - chr2L 3078300 intron toc - chr2L_10_3075001 chr2L_3075001 RAL-409_125b 85 chr2L 3108828 3108893 chr2L 3108945 3109020 7 122 5.0 3.0 4.0 1.4 192 chr2L 3108828 exon toc - chr2L 3108924 intron toc - chr2L 3109020 intron toc - chr2L_7_3105001 chr2L_3105001 RAL-409_125b 86 chr2L 3159667 3159700 chr2L 3159788 3159821 6 124 7.0 4.5 5.8 0.9 154 chr2L 3159667 intergenic Mad -,gkt + chr2L 3159744 intergenic Mad -,gkt + chr2L 3159821 intergenic gkt +,Mad - chr2L_6_3155001 chr2L_3155001 RAL-409_125b 87 chr2L 3185050 3185080 chr2L 3185176 3185201 5 123 5.0 0.0 2.5 1.4 151 chr2L 3185050 exon CG34393 - chr2L 3185126 intron CG34393 - chr2L 3185201 intron CG34393 - chr2L_5_3185001 chr2L_3185001 RAL-409_125b 88 chr2L 3186106 3186152 chr2L 3186387 3186449 14 302 6.5 4.5 5.5 2.2 343 chr2L 3186106 intron CG34393 - chr2L 3186278 intron CG34393 - chr2L 3186449 intron CG34393 - chr2L_14_3185001 chr2L_3185001 RAL-409_125b 89 chr2L 3186431 3186493 chr2L 3186562 3186629 12 132 2.5 6.0 4.2 2.3 198 chr2L 3186431 intron CG34393 - chr2L 3186530 intron CG34393 - chr2L 3186629 intron CG34393 - chr2L_12_3185001 chr2L_3185001 RAL-409_125b 90 chr2L 3202401 3202449 chr2L 3212065 3212112 mdg1 7 9659 11.0 8.0 9.5 0.7 9711 chr2L 3202401 intergenic not near genes chr2L 3207256 intergenic not near genes chr2L 3212112 intergenic not near genes chr2L_7_3205001 chr2L_3205001 RAL-409_125b 91 chr2L 3228495 3228558 chr2L 3228606 3228674 18 119 6.5 7.5 7.0 2.2 179 chr2L 3228495 intergenic not near genes chr2L 3228584 intergenic not near genes chr2L 3228674 intergenic not near genes chr2L_18_3225001 chr2L_3225001 RAL-409_125b 92 chr2L 3232003 3232063 chr2L 3232132 3232182 4 128 5.0 2.0 3.5 0.9 179 chr2L 3232003 intergenic not near genes chr2L 3232092 intergenic not near genes chr2L 3232182 intergenic not near genes chr2L_4_3230001 chr2L_3230001 RAL-409_125b 93 chr2L 3240566 3240628 chr2L 3240988 3241040 10 416 7.0 7.0 7.0 1.2 474 chr2L 3240566 intergenic not near genes chr2L 3240803 intergenic not near genes chr2L 3241040 intergenic not near genes chr2L_10_3240001 chr2L_3240001 RAL-409_125b 94 chr2L 3251477 3251521 chr2L 3259094 3259113 springer 10 7614 1.0 7.5 4.2 1.9 7636 chr2L 3251477 intergenic not near genes chr2L 3255295 intergenic not near genes chr2L 3259113 intergenic not near genes chr2L_10_3255001 chr2L_3255001 RAL-409_125b 95 chr2L 3260674 3260703 chr2L 3260864 3260891 9 186 8.5 8.5 8.5 0.9 217 chr2L 3260674 intergenic CR45337 - chr2L 3260782 intergenic CR45337 - chr2L 3260891 intergenic CR45337 - chr2L_9_3260001 chr2L_3260001 RAL-409_125b 96 chr2L 3261473 3261505 chr2L 3261615 3261647 12 141 5.0 10.5 7.8 1.4 174 chr2L 3261473 intergenic CR45338 -,CR45337 - chr2L 3261560 intergenic CR45338 -,CR45337 - chr2L 3261647 3` UTR CR45338 - chr2L_12_3260001 chr2L_3260001 RAL-409_125b 97 chr2L 3272920 3272969 chr2L 3273046 3273095 5 126 0.0 6.0 3.0 1.2 175 chr2L 3272920 intergenic not near genes chr2L 3273008 intergenic not near genes chr2L 3273095 intergenic not near genes chr2L_5_3270001 chr2L_3270001 RAL-409_125b 98 chr2L 3291215 3291262 chr2L 3291332 3291387 8 116 6.0 8.0 7.0 1.0 172 chr2L 3291215 intergenic CG9664 - chr2L 3291301 3` UTR CG9664 - chr2L 3291387 3` UTR CG9664 - chr2L_8_3290001 chr2L_3290001 RAL-409_125b 99 chr2L 3326779 3326834 chr2L 3326898 3326964 6 126 6.5 6.5 6.5 0.8 185 chr2L 3326779 intergenic CG33281 + chr2L 3326872 intergenic CG33281 + chr2L 3326964 intergenic CG33281 + chr2L_6_3325001 chr2L_3325001 RAL-409_125b 100 chr2L 3388578 3388625 chr2L 3388869 3388903 pogo 12 289 3.0 4.5 3.8 2.5 325 chr2L 3388578 intergenic CG42460 - chr2L 3388740 intergenic CG42460 - chr2L 3388903 intergenic CG42460 -,CR44791 + chr2L_12_3385001 chr2L_3385001 RAL-409_125b 101 chr2L 3467527 3467554 chr2L 3467700 3467727 5 173 8.0 6.0 7.0 0.6 200 chr2L 3467527 3` UTR CG3238 - chr2L 3467627 3` UTR CG3238 - chr2L 3467727 3` UTR CG3238 - chr2L_5_3465001 chr2L_3465001 RAL-409_125b 102 chr2L 3486046 3486111 chr2L 3486190 3486255 13 142 8.0 6.0 7.0 1.6 209 chr2L 3486046 intron CG15414 - chr2L 3486150 intron CG15414 - chr2L 3486255 intron CG15414 - chr2L_13_3485001 chr2L_3485001 RAL-409_125b 103 chr2L 3556884 3556961 chr2L 3557024 3557063 4 124 2.5 4.5 3.5 0.9 179 chr2L 3556884 intergenic not near genes chr2L 3556974 intergenic not near genes chr2L 3557063 intergenic not near genes chr2L_4_3555001 chr2L_3555001 RAL-409_125b 104 chr2L 3603576 3603647 chr2L 3603722 3603783 25 142 5.5 8.0 6.8 3.2 207 chr2L 3603576 intergenic not near genes chr2L 3603680 intergenic not near genes chr2L 3603783 intergenic odd - chr2L_25_3600001 chr2L_3600001 RAL-409_125b 105 chr2L 3616540 3616568 chr2L 3616667 3616694 4 127 3.5 4.5 4.0 0.8 154 chr2L 3616540 5` UTR CR44310 + chr2L 3616617 5` UTR CR44310 + chr2L 3616694 5` UTR CR44310 + chr2L_4_3615001 chr2L_3615001 RAL-409_125b 106 chr2L 3632066 3632115 chr2L 3632345 3632368 13 269 6.5 7.5 7.0 1.6 302 chr2L 3632066 intron for - chr2L 3632217 intron for - chr2L 3632368 intron for - chr2L_13_3630001 chr2L_3630001 RAL-409_125b 107 chr2L 3649732 3649810 chr2L 3654989 3655050 copia 11 5253 6.0 6.5 6.2 1.5 5318 chr2L 3649732 intron for - chr2L 3652391 intron for - chr2L 3655050 intron for - chr2L_11_3650001 chr2L_3650001 RAL-409_125b 108 chr2L 3659748 3659773 chr2L 3659877 3659886 4 124 4.0 5.0 4.5 0.7 138 chr2L 3659748 intergenic not near genes chr2L 3659817 intergenic not near genes chr2L 3659886 intergenic not near genes chr2L_4_3655001 chr2L_3655001 RAL-409_125b 109 chr2L 3667911 3667974 chr2L 3668127 3668185 7 214 5.0 4.0 4.5 1.3 274 chr2L 3667911 intron CG34340 + chr2L 3668048 intron,3` UTR CG34340 +,Sfp24Ba - chr2L 3668185 intron,exon CG34340 +,Sfp24Ba - chr2L_7_3665001 chr2L_3665001 RAL-409_125b 110 chr2L 3685984 3686054 chr2L 3686122 3686187 6 137 4.5 7.0 5.8 0.9 203 chr2L 3685984 intron CG34340 + chr2L 3686086 intron CG34340 + chr2L 3686187 intron CG34340 + chr2L_6_3685001 chr2L_3685001 RAL-409_125b 111 chr2L 3688309 3688317 chr2L 3688427 3688450 4 128 9.0 1.5 5.2 0.6 141 chr2L 3688309 intron CG34340 + chr2L 3688380 intron CG34340 + chr2L 3688450 intron CG34340 + chr2L_4_3685001 chr2L_3685001 RAL-409_125b 112 chr2L 3693794 3693843 chr2L 3693918 3693978 15 132 4.5 8.0 6.2 2.1 184 chr2L 3693794 exon Acp24A4 - chr2L 3693886 5` UTR Acp24A4 - chr2L 3693978 intergenic Acp24A4 -,CG43165 - chr2L_15_3690001 chr2L_3690001 RAL-409_125b 113 chr2L 3792440 3792496 chr2L 3792583 3792638 9 140 4.0 3.5 3.8 1.9 198 chr2L 3792440 intron CG3921 + chr2L 3792539 intron CG3921 + chr2L 3792638 exon CG3921 + chr2L_9_3790001 chr2L_3790001 RAL-409_125b 114 chr2L 3820174 3820216 chr2L 3820371 3820415 7 189 9.5 8.0 8.8 0.7 241 chr2L 3820174 intergenic not near genes chr2L 3820294 intergenic not near genes chr2L 3820415 intergenic not near genes chr2L_7_3820001 chr2L_3820001 RAL-409_125b 115 chr2L 3831792 3831863 chr2L 3831918 3831994 12 129 6.0 4.5 5.2 1.9 202 chr2L 3831792 intergenic not near genes chr2L 3831893 intergenic not near genes chr2L 3831994 intergenic not near genes chr2L_12_3830001 chr2L_3830001 RAL-409_125b 116 chr2L 3936618 3936653 chr2L 3936735 3936778 11 124 5.0 6.0 5.5 1.7 160 chr2L 3936618 intron fred - chr2L 3936698 intron fred - chr2L 3936778 intron fred - chr2L_11_3935001 chr2L_3935001 RAL-409_125b 117 chr2L 3943761 3943822 chr2L 3943902 3943963 11 141 4.0 5.5 4.8 1.9 202 chr2L 3943761 intron fred - chr2L 3943862 intron fred - chr2L 3943963 intron fred - chr2L_11_3940001 chr2L_3940001 RAL-409_125b 118 chr2L 3992899 3992926 chr2L 3993043 3993070 9 144 6.5 4.5 5.5 1.4 171 chr2L 3992899 intergenic not near genes chr2L 3992984 intergenic not near genes chr2L 3993070 intergenic not near genes chr2L_9_3990001 chr2L_3990001 RAL-409_125b 119 chr2L 3992927 3992966 chr2L 3993040 3993110 6 136 3.5 5.0 4.2 1.2 183 chr2L 3992927 intergenic not near genes chr2L 3993018 intergenic not near genes chr2L 3993110 intergenic not near genes chr2L_6_3990001 chr2L_3990001 RAL-409_125b 120 chr2L 4037769 4037809 chr2L 4037906 4037946 7 137 3.5 5.0 4.2 1.3 177 chr2L 4037769 intron ed + chr2L 4037858 intron ed + chr2L 4037946 intron ed + chr2L_7_4035001 chr2L_4035001 RAL-409_125b 121 chr2L 4038943 4039009 chr2L 4039067 4039135 4 127 2.5 1.5 2.0 1.3 192 chr2L 4038943 intron ed + chr2L 4039039 intron ed + chr2L 4039135 intron ed + chr2L_4_4035001 chr2L_4035001 RAL-409_125b 122 chr2L 4066001 4066045 chr2L 4068876 4068919 Juan 10 2871 5.5 7.0 6.2 1.4 2918 chr2L 4066001 intron ed + chr2L 4067460 intron ed + chr2L 4068919 intron ed + chr2L_10_4065001 chr2L_4065001 RAL-409_125b 123 chr2L 4150619 4150643 chr2L 4150706 4150773 8 120 2.0 2.0 2.0 2.7 154 chr2L 4150619 exon CG2955 + chr2L 4150696 exon CG2955 + chr2L 4150773 exon CG2955 + chr2L_8_4150001 chr2L_4150001 RAL-409_125b 124 chr2L 4157315 4157363 chr2L 4157475 4157524 6 161 5.0 5.5 5.2 1.0 209 chr2L 4157315 intergenic not near genes chr2L 4157420 intergenic not near genes chr2L 4157524 intergenic not near genes chr2L_6_4155001 chr2L_4155001 RAL-409_125b 125 chr2L 4166339 4166403 chr2L 4166467 4166536 19 129 3.5 4.0 3.8 4.0 197 chr2L 4166339 intergenic Or24a - chr2L 4166438 intergenic Or24a - chr2L 4166536 intergenic Or24a - chr2L_19_4165001 chr2L_4165001 RAL-409_125b 126 chr2L 4179394 4179458 chr2L 4179569 4179615 7 167 0.0 2.0 1.0 3.5 221 chr2L 4179394 intergenic not near genes chr2L 4179504 intergenic not near genes chr2L 4179615 intergenic not near genes chr2L_7_4175001 chr2L_4175001 RAL-409_125b 127 chr2L 4180097 4180118 chr2L 4180203 4180238 6 120 4.0 3.0 3.5 1.3 141 chr2L 4180097 intergenic not near genes chr2L 4180168 intergenic not near genes chr2L 4180238 intergenic not near genes chr2L_6_4180001 chr2L_4180001 RAL-409_125b 128 chr2L 4184447 4184507 chr2L 4184813 4184879 6 371 3.5 2.0 2.8 1.6 432 chr2L 4184447 intergenic not near genes chr2L 4184663 intergenic not near genes chr2L 4184879 intergenic not near genes chr2L_6_4180001 chr2L_4180001 RAL-409_125b 129 chr2L 4359996 4360033 chr2L 4360197 4360241 6 206 10.0 4.5 7.2 0.7 245 chr2L 4359996 intergenic not near genes chr2L 4360118 intergenic not near genes chr2L 4360241 intergenic not near genes chr2L_6_4360001 chr2L_4360001 RAL-409_125b 130 chr2L 4361889 4361923 chr2L 4362015 4362051 8 126 10.0 6.0 8.0 0.9 162 chr2L 4361889 intergenic Traf4 + chr2L 4361970 5` UTR Traf4 + chr2L 4362051 5` UTR Traf4 + chr2L_8_4360001 chr2L_4360001 RAL-409_125b 131 chr2L 4428486 4428538 chr2L 4428827 4428830 13 336 5.5 4.5 5.0 2.2 344 chr2L 4428486 intron CG15431 - chr2L 4428658 intron CG15431 - chr2L 4428830 intron CG15431 - chr2L_13_4425001 chr2L_4425001 RAL-409_125b 132 chr2L 4601669 4601721 chr2L 4609154 4609205 mdg1 12 7488 9.5 5.0 7.2 1.5 7536 chr2L 4601669 intron dp - chr2L 4605437 intron dp - chr2L 4609205 intron dp - chr2L_12_4605001 chr2L_4605001 RAL-409_125b 133 chr2L 4661795 4661847 chr2L 4669425 4669476 opus 4 7624 5.0 7.5 6.2 0.6 7681 chr2L 4661795 intergenic not near genes chr2L 4665636 intergenic not near genes chr2L 4669476 intergenic not near genes chr2L_4_4665001 chr2L_4665001 RAL-409_125b 134 chr2L 4672789 4672846 chr2L 4673295 4673347 17 503 6.0 5.0 5.5 2.6 558 chr2L 4672789 intergenic not near genes chr2L 4673068 intergenic not near genes chr2L 4673347 intergenic not near genes chr2L_17_4670001 chr2L_4670001 RAL-409_125b 135 chr2L 4693380 4693416 chr2L 4693592 4693633 5 215 7.5 17.5 12.5 0.4 253 chr2L 4693380 intergenic not near genes chr2L 4693506 intergenic not near genes chr2L 4693633 intergenic not near genes chr2L_5_4690001 chr2L_4690001 RAL-409_125b 136 chr2L 4708717 4708752 chr2L 4708817 4708856 10 102 3.5 6.0 4.8 1.7 139 chr2L 4708717 intron CG34351 + chr2L 4708786 intron CG34351 + chr2L 4708856 intron CG34351 + chr2L_10_4705001 chr2L_4705001 RAL-409_125b 137 chr2L 4742300 4742317 chr2L 4742399 4742414 6 114 5.5 4.5 5.0 1.0 114 chr2L 4742300 intron CG15630 - chr2L 4742357 intron CG15630 - chr2L 4742414 intron CG15630 - chr2L_6_4740001 chr2L_4740001 RAL-409_125b 138 chr2L 4781143 4781158 chr2L 4781273 4781298 4 140 2.5 6.5 4.5 0.7 155 chr2L 4781143 intron CG15630 - chr2L 4781220 intron CG15630 - chr2L 4781298 intron CG15630 - chr2L_4_4780001 chr2L_4780001 RAL-409_125b 139 chr2L 4782013 4782068 chr2L 4782121 4782174 16 120 2.0 2.0 2.0 5.3 161 chr2L 4782013 intron CG15630 - chr2L 4782094 intron CG15630 - chr2L 4782174 intron CG15630 - chr2L_16_4780001 chr2L_4780001 RAL-409_125b 140 chr2L 4793283 4793319 chr2L 4793628 4793664 13 341 4.0 7.5 5.8 1.9 381 chr2L 4793283 intron CG15630 - chr2L 4793474 intron CG15630 - chr2L 4793664 exon CG15630 - chr2L_13_4790001 chr2L_4790001 RAL-409_125b 141 chr2L 4858423 4858474 chr2L 4858556 4858618 5 136 4.5 1.0 2.8 1.3 195 chr2L 4858423 intron pog + chr2L 4858520 intron pog + chr2L 4858618 intron pog + chr2L_5_4855001 chr2L_4855001 RAL-409_125b 142 chr2L 4907612 4907651 chr2L 4907738 4907777 5 125 8.5 11.0 9.8 0.5 165 chr2L 4907612 intergenic not near genes chr2L 4907694 intergenic not near genes chr2L 4907777 intergenic not near genes chr2L_5_4905001 chr2L_4905001 RAL-409_125b 143 chr2L 4918134 4918188 chr2L 4923257 4923311 jockey 21 5121 5.0 3.0 4.0 4.2 5177 chr2L 4918134 intron hoe1 - chr2L 4920722 intron hoe1 - chr2L 4923311 intron hoe1 - chr2L_21_4920001 chr2L_4920001 RAL-409_125b 144 chr2L 5040647 5040707 chr2L 5040788 5040843 15 143 6.5 9.0 7.8 1.7 196 chr2L 5040647 3` UTR,3` UTR,3` UTR CG14042 +,SP555 +,CG31650 - chr2L 5040745 3` UTR,3` UTR,3` UTR CG14042 +,SP555 +,CG31650 - chr2L 5040843 3` UTR CG31650 - chr2L_15_5040001 chr2L_5040001 RAL-409_125b 145 chr2L 5092371 5092375 chr2L 5092508 5092512 4 136 11.0 2.5 6.8 0.5 141 chr2L 5092371 intron pgant5 - chr2L 5092442 intron pgant5 - chr2L 5092512 intron pgant5 - chr2L_4_5090001 chr2L_5090001 RAL-409_125b 146 chr2L 5092376 5092435 chr2L 5092503 5092572 9 135 4.0 2.5 3.2 2.1 196 chr2L 5092376 intron pgant5 - chr2L 5092474 intron pgant5 - chr2L 5092572 intron pgant5 - chr2L_9_5090001 chr2L_5090001 RAL-409_125b 147 chr2L 5117252 5117324 chr2L 5117379 5117456 25 128 4.0 5.5 4.8 4.3 204 chr2L 5117252 intron Msp300 + chr2L 5117354 intron Msp300 + chr2L 5117456 intron Msp300 + chr2L_25_5115001 chr2L_5115001 RAL-409_125b 148 chr2L 5120927 5121002 chr2L 5121071 5121125 13 138 3.5 3.5 3.5 2.9 198 chr2L 5120927 intron Msp300 + chr2L 5121026 intron Msp300 + chr2L 5121125 intron Msp300 + chr2L_13_5120001 chr2L_5120001 RAL-409_125b 149 chr2L 5242837 5242898 chr2L 5243057 5243102 20 221 7.0 8.0 7.5 2.4 265 chr2L 5242837 intron tkv - chr2L 5242970 intron tkv - chr2L 5243102 intron tkv - chr2L_20_5240001 chr2L_5240001 RAL-409_125b 150 chr2L 5242936 5242937 chr2L 16217660 16217661 5 10974724 2.0 24.5 13.2 0.4 10974725 chr2L 5242936 intron tkv - chr2L 10730298 3` UTR,5` UTR CG6443 +,CG17118 + chr2L 16217661 intergenic not near genes chr2L_5_10730001 chr2L_10730001 RAL-409_125b 151 chr2L 5253159 5253209 chr2L 5253347 5253395 8 190 5.5 4.5 5.0 1.3 236 chr2L 5253159 intron tkv - chr2L 5253277 intron tkv - chr2L 5253395 intron tkv - chr2L_8_5250001 chr2L_5250001 RAL-409_125b 152 chr2L 5258712 5258785 chr2L 5258839 5258913 13 125 8.5 5.0 6.8 1.7 201 chr2L 5258712 intron tkv - chr2L 5258812 intron tkv - chr2L 5258913 intron tkv - chr2L_13_5255001 chr2L_5255001 RAL-409_125b 153 chr2L 5262498 5262541 chr2L 5262603 5262633 10 101 7.0 4.0 5.5 1.5 135 chr2L 5262498 intron tkv - chr2L 5262566 intron tkv - chr2L 5262633 intron tkv - chr2L_10_5260001 chr2L_5260001 RAL-409_125b 154 chr2L 5287386 5287440 chr2L 5287523 5287566 11 139 4.5 7.5 6.0 1.6 180 chr2L 5287386 intergenic CR44743 -,CR44742 + chr2L 5287476 3` UTR CR44743 - chr2L 5287566 3` UTR CR44743 - chr2L_11_5285001 chr2L_5285001 RAL-409_125b 155 chr2L 5342736 5342803 chr2L 5345164 5345196 Doc 13 2427 3.5 6.5 5.0 2.2 2460 chr2L 5342736 intergenic not near genes chr2L 5343966 intergenic not near genes chr2L 5345196 intergenic not near genes chr2L_13_5340001 chr2L_5340001 RAL-409_125b 156 chr2L 5421561 5421600 chr2L 5421793 5421809 10 228 7.5 5.0 6.2 1.4 248 chr2L 5421561 intergenic not near genes chr2L 5421685 intergenic not near genes chr2L 5421809 intergenic not near genes chr2L_10_5420001 chr2L_5420001 RAL-409_125b 157 chr2L 5458321 5458357 chr2L 5458455 5458471 6 130 8.0 4.5 6.2 0.8 150 chr2L 5458321 intergenic not near genes chr2L 5458396 intergenic not near genes chr2L 5458471 intergenic not near genes chr2L_6_5455001 chr2L_5455001 RAL-409_125b 158 chr2L 5459782 5459848 chr2L 5459913 5459972 17 128 4.0 5.5 4.8 2.9 190 chr2L 5459782 intergenic not near genes chr2L 5459877 intergenic not near genes chr2L 5459972 intergenic not near genes chr2L_17_5455001 chr2L_5455001 RAL-409_125b 159 chr2L 5475111 5475160 chr2L 5475260 5475315 10 153 3.5 2.5 3.0 2.5 204 chr2L 5475111 intergenic not near genes chr2L 5475213 intergenic not near genes chr2L 5475315 intergenic not near genes chr2L_10_5475001 chr2L_5475001 RAL-409_125b 160 chr2L 5492496 5492791 chr2L 5492638 5492923 26 137 5.5 9.0 7.2 3.2 427 chr2L 5492496 intergenic not near genes chr2L 5492710 intergenic not near genes chr2L 5492923 intergenic not near genes chr2L_26_5490001 chr2L_5490001 RAL-409_125b 161 chr2L 5500013 5500065 chr2L 5500149 5500201 13 132 0.0 8.0 4.0 2.6 188 chr2L 5500013 intergenic not near genes chr2L 5500107 intergenic not near genes chr2L 5500201 intergenic not near genes chr2L_13_5500001 chr2L_5500001 RAL-409_125b 162 chr2L 5501399 5501471 chr2L 5501525 5501597 19 124 3.5 5.5 4.5 3.5 198 chr2L 5501399 intergenic not near genes chr2L 5501498 intergenic not near genes chr2L 5501597 intergenic not near genes chr2L_19_5500001 chr2L_5500001 RAL-409_125b 163 chr2L 5508491 5508561 chr2L 5508613 5508687 15 124 3.5 5.0 4.2 2.9 196 chr2L 5508491 intergenic not near genes chr2L 5508589 intergenic not near genes chr2L 5508687 intergenic not near genes chr2L_15_5505001 chr2L_5505001 RAL-409_125b 164 chr2L 5511283 5511340 chr2L 5511416 5511473 12 132 4.0 7.5 5.8 1.8 190 chr2L 5511283 intergenic not near genes chr2L 5511378 intergenic not near genes chr2L 5511473 intergenic not near genes chr2L_12_5510001 chr2L_5510001 RAL-409_125b 165 chr2L 5594292 5594351 chr2L 5594414 5594480 15 134 5.5 7.0 6.2 2.1 188 chr2L 5594292 intergenic not near genes chr2L 5594386 intergenic not near genes chr2L 5594480 intergenic not near genes chr2L_15_5590001 chr2L_5590001 RAL-409_125b 166 chr2L 5614275 5614314 chr2L 5614397 5614450 13 132 7.5 9.5 8.5 1.4 175 chr2L 5614275 intron CG14010 - chr2L 5614362 intron CG14010 - chr2L 5614450 intron CG14010 - chr2L_13_5610001 chr2L_5610001 RAL-409_125b 167 chr2L 5686412 5686444 chr2L 5686541 5686572 7 130 4.5 9.5 7.0 0.9 160 chr2L 5686412 intergenic not near genes chr2L 5686492 intergenic not near genes chr2L 5686572 intergenic not near genes chr2L_7_5685001 chr2L_5685001 RAL-409_125b 168 chr2L 5764849 5764927 chr2L 5765008 5765085 4 159 0.0 4.5 2.2 1.2 236 chr2L 5764849 intron obst-E - chr2L 5764967 intron obst-E - chr2L 5765085 intron obst-E - chr2L_4_5760001 chr2L_5760001 RAL-409_125b 169 chr2L 5780220 5780291 chr2L 5780351 5780422 9 130 4.0 4.0 4.0 1.8 202 chr2L 5780220 intron CG9171 - chr2L 5780321 intron CG9171 - chr2L 5780422 intron CG9171 - chr2L_9_5780001 chr2L_5780001 RAL-409_125b 170 chr2L 5804158 5804200 chr2L 5804392 5804425 9 236 2.0 7.5 4.8 1.6 267 chr2L 5804158 intergenic CG7239 + chr2L 5804292 intergenic CG7239 + chr2L 5804425 intergenic CG7239 + chr2L_9_5800001 chr2L_5800001 RAL-409_125b 171 chr2L 5827683 5827730 chr2L 5836734 5836788 roo 14 9052 6.0 4.0 5.0 2.3 9105 chr2L 5827683 intron TrissinR + chr2L 5832236 intron TrissinR + chr2L 5836788 intron TrissinR + chr2L_14_5830001 chr2L_5830001 RAL-409_125b 172 chr2L 5922763 5922910 chr2L 5922902 5923034 5 133 0.0 0.0 0.0 5.0 271 chr2L 5922763 3` UTR bchs + chr2L 5922898 3` UTR CG9016 - chr2L 5923034 3` UTR CG9016 - chr2L_5_5920001 chr2L_5920001 RAL-409_125b 173 chr2L 5931266 5931317 chr2L 5931428 5931474 13 162 5.5 3.5 4.5 2.4 208 chr2L 5931266 intron dsf + chr2L 5931370 intron dsf + chr2L 5931474 intron dsf + chr2L_13_5930001 chr2L_5930001 RAL-409_125b 174 chr2L 6003481 6003551 chr2L 6003610 6003680 13 128 8.0 4.5 6.2 1.8 199 chr2L 6003481 3` UTR Tsp26A + chr2L 6003580 3` UTR,3` UTR Tsp26A +,Gal - chr2L 6003680 3` UTR,3` UTR Tsp26A +,Gal - chr2L_13_6000001 chr2L_6000001 RAL-409_125b 175 chr2L 6078558 6078578 chr2L 6079364 6079379 4 803 9.0 9.0 9.0 0.4 821 chr2L 6078558 5` UTR CR9162 + chr2L 6078968 5` UTR CR9162 + chr2L 6079379 5` UTR CR9162 + chr2L_4_6075001 chr2L_6075001 RAL-409_125b 176 chr2L 6078586 6078626 chr2L 6079363 6079432 13 797 7.0 9.0 8.0 1.4 846 chr2L 6078586 5` UTR CR9162 + chr2L 6079009 5` UTR CR9162 + chr2L 6079432 5` UTR CR9162 + chr2L_13_6075001 chr2L_6075001 RAL-409_125b 177 chr2L 6103168 6103251 chr2L 6103296 6103378 17 117 5.5 3.0 4.2 3.3 210 chr2L 6103168 intron stai + chr2L 6103273 intron stai + chr2L 6103378 intron stai + chr2L_17_6100001 chr2L_6100001 RAL-409_125b 178 chr2L 6108744 6108824 chr2L 6108876 6108956 12 132 3.5 3.5 3.5 2.7 212 chr2L 6108744 intron stai + chr2L 6108850 intron stai + chr2L 6108956 intron stai + chr2L_12_6105001 chr2L_6105001 RAL-409_125b 179 chr2L 6130738 6130765 chr2L 6130850 6130899 4 128 7.5 1.0 4.2 0.8 161 chr2L 6130738 intergenic CG42730 -,tectonic -,CG9222 + chr2L 6130818 intergenic CG42730 -,tectonic -,CG9222 + chr2L 6130899 intergenic CG9222 +,CG42730 -,tectonic - chr2L_4_6130001 chr2L_6130001 RAL-409_125b 180 chr2L 6133555 6133612 chr2L 6133692 6133754 12 137 4.0 7.5 5.8 1.8 199 chr2L 6133555 3` UTR CR45719 - chr2L 6133654 3` UTR CR45719 - chr2L 6133754 intergenic CR45719 - chr2L_12_6130001 chr2L_6130001 RAL-409_125b 181 chr2L 6227350 6227387 chr2L 6227481 6227508 9 124 3.0 7.0 5.0 1.5 158 chr2L 6227350 intergenic not near genes chr2L 6227429 intergenic not near genes chr2L 6227508 intergenic not near genes chr2L_9_6225001 chr2L_6225001 RAL-409_125b 182 chr2L 6244239 6244280 chr2L 6244367 6244412 6 130 4.0 7.5 5.8 0.9 173 chr2L 6244239 intergenic not near genes chr2L 6244326 intergenic not near genes chr2L 6244412 intergenic not near genes chr2L_6_6240001 chr2L_6240001 RAL-409_125b 183 chr2L 6277474 6277540 chr2L 6277617 6277683 10 141 6.0 5.0 5.5 1.5 209 chr2L 6277474 intron Ddr + chr2L 6277578 intron Ddr + chr2L 6277683 intron Ddr + chr2L_10_6275001 chr2L_6275001 RAL-409_125b 184 chr2L 6308265 6308327 chr2L 6308398 6308460 12 129 7.5 9.0 8.2 1.3 195 chr2L 6308265 intron Ddr + chr2L 6308362 intron Ddr + chr2L 6308460 intron,exon Ddr +,CG43922 - chr2L_12_6305001 chr2L_6305001 RAL-409_125b 185 chr2L 6363107 6363126 chr2L 6366079 6366098 Burdock 5 2972 12.0 4.0 8.0 0.6 2991 chr2L 6363107 intergenic not near genes chr2L 6364602 intergenic not near genes chr2L 6366098 intergenic not near genes chr2L_5_6360001 chr2L_6360001 RAL-409_125b 186 chr2L 6363128 6363181 chr2L 6366070 6366142 Burdock 12 2961 3.5 3.5 3.5 2.7 3014 chr2L 6363128 intergenic not near genes chr2L 6364635 intergenic not near genes chr2L 6366142 intergenic not near genes chr2L_12_6360001 chr2L_6360001 RAL-409_125b 187 chr2L 6390108 6390129 chr2L 6390238 6390254 5 129 4.5 0.5 2.5 1.4 146 chr2L 6390108 intron CG42368 - chr2L 6390181 intron CG42368 - chr2L 6390254 intron CG42368 - chr2L_5_6390001 chr2L_6390001 RAL-409_125b 188 chr2L 6421858 6421939 chr2L 6421987 6422068 16 122 4.5 3.5 4.0 3.2 210 chr2L 6421858 exon Tig - chr2L 6421963 intron Tig - chr2L 6422068 intron Tig - chr2L_16_6420001 chr2L_6420001 RAL-409_125b 189 chr2L 6426832 6426837 chr2L 6445142 6445147 roo 5 18309 15.5 8.0 11.8 0.4 18315 chr2L 6426832 3` UTR CG9527 - chr2L 6435990 intron CG9527 - chr2L 6445147 exon CG9527 - chr2L_5_6435001 chr2L_6435001 RAL-409_125b 190 chr2L 6426838 6426882 chr2L 6445131 6445181 roo 19 18303 8.5 7.0 7.8 2.2 18343 chr2L 6426838 3` UTR CG9527 - chr2L 6436010 intron CG9527 - chr2L 6445181 exon CG9527 - chr2L_19_6435001 chr2L_6435001 RAL-409_125b 191 chr2L 6463541 6463584 chr2L 6463648 6463705 12 119 7.0 4.5 5.8 1.8 164 chr2L 6463541 exon CG16947 - chr2L 6463623 exon CG16947 - chr2L 6463705 exon CG16947 - chr2L_12_6460001 chr2L_6460001 RAL-409_125b 192 chr2L 6473123 6473159 chr2L 6473246 6473288 13 127 2.5 7.5 5.0 2.2 165 chr2L 6473123 intron mmy - chr2L 6473206 intron mmy - chr2L 6473288 intron mmy - chr2L_13_6470001 chr2L_6470001 RAL-409_125b 193 chr2L 6527207 6527236 chr2L 6527336 6527365 13 128 5.0 3.5 4.2 2.5 158 chr2L 6527207 intergenic CG31637 +,eya - chr2L 6527286 intergenic eya -,CG31637 + chr2L 6527365 intergenic eya -,CG31637 + chr2L_13_6525001 chr2L_6525001 RAL-409_125b 194 chr2L 6544336 6544395 chr2L 6544478 6544537 9 141 4.5 5.5 5.0 1.5 201 chr2L 6544336 intron eya - chr2L 6544436 intron eya - chr2L 6544537 intron eya - chr2L_9_6540001 chr2L_6540001 RAL-409_125b 195 chr2L 6626849 6626912 chr2L 6626977 6627032 18 127 13.0 10.0 11.5 1.4 183 chr2L 6626849 intron Oatp26F - chr2L 6626940 intron Oatp26F - chr2L 6627032 intron Oatp26F - chr2L_18_6625001 chr2L_6625001 RAL-409_125b 196 chr2L 6640859 6640937 chr2L 6641004 6641056 12 134 4.5 7.5 6.0 1.7 197 chr2L 6640859 exon CG31635 - chr2L 6640958 intron CG31635 - chr2L 6641056 intron CG31635 - chr2L_12_6640001 chr2L_6640001 RAL-409_125b 197 chr2L 6724430 6724467 chr2L 6724556 6724585 8 124 10.5 4.0 7.2 1.0 155 chr2L 6724430 intron Liprin-alpha + chr2L 6724508 intron Liprin-alpha + chr2L 6724585 intron Liprin-alpha + chr2L_8_6720001 chr2L_6720001 RAL-409_125b 198 chr2L 6771962 6772021 chr2L 6772074 6772120 11 107 3.0 4.5 3.8 2.3 158 chr2L 6771962 intron CG11321 - chr2L 6772041 intron CG11321 - chr2L 6772120 intron CG11321 - chr2L_11_6770001 chr2L_6770001 RAL-409_125b 199 chr2L 6783757 6783778 chr2L 6783883 6783904 7 125 6.5 3.5 5.0 1.2 147 chr2L 6783757 intron nrv1 - chr2L 6783830 intron nrv1 - chr2L 6783904 intron nrv1 - chr2L_7_6780001 chr2L_6780001 RAL-409_125b 200 chr2L 6799513 6799542 chr2L 6799630 6799680 5 134 9.5 5.0 7.2 0.6 167 chr2L 6799513 5` UTR CR43610 + chr2L 6799596 5` UTR CR43610 + chr2L 6799680 intergenic CR43610 +,CG17376 - chr2L_5_6795001 chr2L_6795001 RAL-409_125b 201 chr2L 6818079 6818108 chr2L 6818218 6818240 6 137 7.5 7.5 7.5 0.7 161 chr2L 6818079 intergenic not near genes chr2L 6818160 intergenic not near genes chr2L 6818240 intergenic not near genes chr2L_6_6815001 chr2L_6815001 RAL-409_125b 202 chr2L 6850351 6850406 chr2L 6850484 6850539 11 130 2.5 5.5 4.0 2.2 188 chr2L 6850351 intergenic not near genes chr2L 6850445 intergenic not near genes chr2L 6850539 intergenic not near genes chr2L_11_6850001 chr2L_6850001 RAL-409_125b 203 chr2L 6867749 6867764 chr2L 6867889 6867904 9 139 9.0 11.0 10.0 0.8 155 chr2L 6867749 intron Nha1 - chr2L 6867826 intron Nha1 - chr2L 6867904 intron Nha1 - chr2L_9_6865001 chr2L_6865001 RAL-409_125b 204 chr2L 6876770 6876807 chr2L 6882971 6883015 diver 8 6216 6.0 6.5 6.2 1.1 6245 chr2L 6876770 intron Nlg2 + chr2L 6879892 intron Nlg2 + chr2L 6883015 intron Nlg2 + chr2L_8_6875001 chr2L_6875001 RAL-409_125b 205 chr2L 7042029 7042079 chr2L 7042168 7042191 13 135 6.5 4.5 5.5 2.0 162 chr2L 7042029 intron milt + chr2L 7042110 intron milt + chr2L 7042191 intron milt + chr2L_13_7040001 chr2L_7040001 RAL-409_125b 206 chr2L 7043486 7043524 chr2L 7043623 7043661 10 136 4.5 8.5 6.5 1.3 175 chr2L 7043486 intron milt + chr2L 7043574 intron milt + chr2L 7043661 intron milt + chr2L_10_7040001 chr2L_7040001 RAL-409_125b 207 chr2L 7051086 7051161 chr2L 7051228 7051277 6 133 1.5 2.0 1.8 2.1 191 chr2L 7051086 intron milt + chr2L 7051182 intron milt + chr2L 7051277 intron milt + chr2L_6_7050001 chr2L_7050001 RAL-409_125b 208 chr2L 7125753 7125795 chr2L 7125919 7125961 12 165 6.0 7.0 6.5 1.6 208 chr2L 7125753 intron Pvf3 - chr2L 7125857 intron Pvf3 - chr2L 7125961 intron Pvf3 - chr2L_12_7125001 chr2L_7125001 RAL-409_125b 209 chr2L 7126817 7126841 chr2L 7126946 7126970 6 129 12.5 0.0 6.2 0.8 153 chr2L 7126817 intron Pvf3 - chr2L 7126894 intron Pvf3 - chr2L 7126970 intron Pvf3 - chr2L_6_7125001 chr2L_7125001 RAL-409_125b 210 chr2L 7227956 7228023 chr2L 7228490 7228557 18 532 5.5 8.0 6.8 2.3 601 chr2L 7227956 intron,exon Ndae1 -,CG43799 + chr2L 7228256 intron,exon Ndae1 -,CG43799 + chr2L 7228557 intron,exon Ndae1 -,CG43799 + chr2L_18_7225001 chr2L_7225001 RAL-409_125b 211 chr2L 7244692 7244744 chr2L 7244867 7244919 8 173 3.0 1.0 2.0 2.7 227 chr2L 7244692 intron Ndae1 - chr2L 7244806 intron Ndae1 - chr2L 7244919 intron Ndae1 - chr2L_8_7240001 chr2L_7240001 RAL-409_125b 212 chr2L 7282532 7282569 chr2L 7282640 7282665 4 110 20.5 20.0 20.2 0.2 133 chr2L 7282532 intergenic not near genes chr2L 7282598 intergenic not near genes chr2L 7282665 intergenic not near genes chr2L_4_7280001 chr2L_7280001 RAL-409_125b 213 chr2L 7325890 7325933 chr2L 7326000 7326027 6 106 6.0 5.0 5.5 0.9 137 chr2L 7325890 intergenic not near genes chr2L 7325958 intergenic not near genes chr2L 7326027 intergenic not near genes chr2L_6_7325001 chr2L_7325001 RAL-409_125b 214 chr2L 7343286 7343354 chr2L 7350449 7350497 roo 9 7155 4.0 5.0 4.5 1.6 7211 chr2L 7343286 intron Wnt6 + chr2L 7346892 intron Wnt6 + chr2L 7350497 intron Wnt6 + chr2L_9_7345001 chr2L_7345001 RAL-409_125b 215 chr2L 7405726 7405737 chr2L 7405857 7405868 4 129 12.0 1.0 6.5 0.5 142 chr2L 7405726 exon CG5177 + chr2L 7405797 intron CG5177 + chr2L 7405868 intron CG5177 + chr2L_4_7405001 chr2L_7405001 RAL-409_125b 216 chr2L 7493355 7493421 chr2L 7493496 7493557 6 137 0.5 3.0 1.8 2.1 202 chr2L 7493355 intron Ziz - chr2L 7493456 intron Ziz - chr2L 7493557 intron Ziz - chr2L_6_7490001 chr2L_7490001 RAL-409_125b 217 chr2L 7493632 7493686 chr2L 7493893 7493926 8 252 9.5 6.0 7.8 0.9 294 chr2L 7493632 intron Ziz - chr2L 7493779 intron Ziz - chr2L 7493926 intron Ziz - chr2L_8_7490001 chr2L_7490001 RAL-409_125b 218 chr2L 7555195 7555221 chr2L 7555316 7555341 7 123 0.0 4.5 2.2 2.2 146 chr2L 7555195 intron RapGAP1 - chr2L 7555268 intron RapGAP1 - chr2L 7555341 intron RapGAP1 - chr2L_7_7555001 chr2L_7555001 RAL-409_125b 219 chr2L 7567941 7567954 chr2L 7568057 7568074 4 122 2.5 10.0 6.2 0.6 133 chr2L 7567941 intron RapGAP1 - chr2L 7568008 intron RapGAP1 - chr2L 7568074 intron RapGAP1 - chr2L_4_7565001 chr2L_7565001 RAL-409_125b 220 chr2L 7579157 7579218 chr2L 7579398 7579425 BS 9 237 2.5 2.5 2.5 2.6 268 chr2L 7579157 intergenic RapGAP1 - chr2L 7579291 intergenic RapGAP1 - chr2L 7579425 intergenic RapGAP1 - chr2L_9_7575001 chr2L_7575001 RAL-409_125b 221 chr2L 7585466 7585494 chr2L 7585606 7585643 5 145 7.0 3.0 5.0 0.8 177 chr2L 7585466 intergenic not near genes chr2L 7585554 intergenic not near genes chr2L 7585643 intergenic not near genes chr2L_5_7585001 chr2L_7585001 RAL-409_125b 222 chr2L 7702854 7702917 chr2L 7703066 7703135 23 213 4.0 6.0 5.0 3.8 281 chr2L 7702854 5` UTR Tep3 + chr2L 7702994 5` UTR Tep3 + chr2L 7703135 5` UTR Tep3 + chr2L_23_7700001 chr2L_7700001 RAL-409_125b 223 chr2L 7766598 7766658 chr2L 7766708 7766784 6 105 7.5 2.5 5.0 1.0 186 chr2L 7766598 intergenic not near genes chr2L 7766691 intergenic not near genes chr2L 7766784 intergenic not near genes chr2L_6_7765001 chr2L_7765001 RAL-409_125b 224 chr2L 7829254 7829293 chr2L 7829372 7829441 11 143 2.5 4.5 3.5 2.4 187 chr2L 7829254 intron mts + chr2L 7829348 intron mts + chr2L 7829441 intron mts + chr2L_11_7825001 chr2L_7825001 RAL-409_125b 225 chr2L 7903558 7903620 chr2L 7903686 7903743 11 131 6.0 4.0 5.0 1.8 185 chr2L 7903558 intron Snoo - chr2L 7903650 intron Snoo - chr2L 7903743 intron Snoo - chr2L_11_7900001 chr2L_7900001 RAL-409_125b 226 chr2L 7941175 7941191 chr2L 7941284 7941300 9 108 2.5 7.0 4.8 1.6 125 chr2L 7941175 intron Snoo - chr2L 7941238 intron Snoo - chr2L 7941300 intron Snoo - chr2L_9_7940001 chr2L_7940001 RAL-409_125b 227 chr2L 7959006 7959069 chr2L 7960467 7960532 pogo 12 1461 1.5 5.0 3.2 2.9 1526 chr2L 7959006 intron Snoo - chr2L 7959769 intron Snoo - chr2L 7960532 intron Snoo - chr2L_12_7955001 chr2L_7955001 RAL-409_125b 228 chr2L 7977041 7977108 chr2L 7984066 7984127 297 9 7015 4.5 2.0 3.2 2.1 7086 chr2L 7977041 intron Snoo - chr2L 7980584 intron Snoo - chr2L 7984127 intron,5` UTR Snoo -,CG7231 + chr2L_9_7980001 chr2L_7980001 RAL-409_125b 229 chr2L 7996985 7997031 chr2L 7997135 7997181 9 150 8.0 1.0 4.5 1.6 196 chr2L 7996985 intron CG7227 - chr2L 7997083 intron CG7227 - chr2L 7997181 intron CG7227 - chr2L_9_7995001 chr2L_7995001 RAL-409_125b 230 chr2L 8002988 8003046 chr2L 8003118 8003178 11 130 2.0 5.5 3.8 2.3 190 chr2L 8002988 intron Wwox - chr2L 8003083 intron Wwox - chr2L 8003178 intron Wwox - chr2L_11_8000001 chr2L_8000001 RAL-409_125b 231 chr2L 8013596 8013647 chr2L 8023581 8023632 copia 10 9981 5.0 2.0 3.5 2.2 10036 chr2L 8013596 intron Tg + chr2L 8018614 intron Tg + chr2L 8023632 intron Tg + chr2L_10_8015001 chr2L_8015001 RAL-409_125b 232 chr2L 8044052 8044121 chr2L 8044175 8044250 8 126 4.0 4.5 4.2 1.5 198 chr2L 8044052 exon CG7466 + chr2L 8044151 intron CG7466 + chr2L 8044250 intron CG7466 + chr2L_8_8040001 chr2L_8040001 RAL-409_125b 233 chr2L 8167112 8167180 chr2L 8167248 8167261 23 131 9.0 9.0 9.0 2.3 149 chr2L 8167112 intron Piezo + chr2L 8167186 intron Piezo + chr2L 8167261 intron Piezo + chr2L_23_8165001 chr2L_8165001 RAL-409_125b 234 chr2L 8171280 8171297 chr2L 8171395 8171413 5 125 0.0 9.5 4.8 0.9 133 chr2L 8171280 intron Piezo + chr2L 8171346 intron Piezo + chr2L 8171413 intron Piezo + chr2L_5_8170001 chr2L_8170001 RAL-409_125b 235 chr2L 8244688 8244743 chr2L 8244860 8244908 14 169 3.5 5.5 4.5 2.5 220 chr2L 8244688 intron CG8086 - chr2L 8244798 intron CG8086 - chr2L 8244908 intron CG8086 - chr2L_14_8240001 chr2L_8240001 RAL-409_125b 236 chr2L 8286246 8286323 chr2L 8286383 8286453 15 124 4.5 6.5 5.5 2.3 207 chr2L 8286246 intron Btk29A - chr2L 8286350 intron Btk29A - chr2L 8286453 intron Btk29A - chr2L_15_8285001 chr2L_8285001 RAL-409_125b 237 chr2L 8291213 8291268 chr2L 8291347 8291403 13 130 4.0 5.0 4.5 2.4 190 chr2L 8291213 intron Btk29A - chr2L 8291308 intron Btk29A - chr2L 8291403 intron Btk29A - chr2L_13_8290001 chr2L_8290001 RAL-409_125b 238 chr2L 8322915 8322935 chr2L 8323041 8323061 6 126 1.0 7.5 4.2 1.2 146 chr2L 8322915 exon CG7781 - chr2L 8322988 intron CG7781 - chr2L 8323061 intron CG7781 - chr2L_6_8320001 chr2L_8320001 RAL-409_125b 239 chr2L 8325955 8325992 chr2L 8326081 8326123 15 130 1.5 1.5 1.5 6.0 168 chr2L 8325955 intergenic not near genes chr2L 8326039 intergenic not near genes chr2L 8326123 intergenic not near genes chr2L_15_8325001 chr2L_8325001 RAL-409_125b 240 chr2L 8442758 8442820 chr2L 8442887 8442944 11 127 7.5 5.5 6.5 1.5 186 chr2L 8442758 exon CG31897 + chr2L 8442851 exon CG31897 + chr2L 8442944 exon CG31897 + chr2L_11_8440001 chr2L_8440001 RAL-409_125b 241 chr2L 8452148 8452162 chr2L 8461999 8462013 roo 5 9849 16.0 9.0 12.5 0.4 9865 chr2L 8452148 intron fu12 - chr2L 8457080 intron fu12 - chr2L 8462013 intron fu12 - chr2L_5_8455001 chr2L_8455001 RAL-409_125b 242 chr2L 8452177 8452219 chr2L 8461998 8462070 roo 11 9844 10.5 8.0 9.2 1.1 9893 chr2L 8452177 intron fu12 - chr2L 8457124 intron fu12 - chr2L 8462070 intron fu12 - chr2L_11_8455001 chr2L_8455001 RAL-409_125b 243 chr2L 8470668 8470718 chr2L 8470768 8470843 17 124 5.5 5.5 5.5 2.6 175 chr2L 8470668 intron d + chr2L 8470756 intron d + chr2L 8470843 intron d + chr2L_17_8470001 chr2L_8470001 RAL-409_125b 244 chr2L 8538123 8538188 chr2L 8538249 8538324 6 129 4.0 0.5 2.2 1.9 201 chr2L 8538123 intron CG17834 + chr2L 8538224 intron CG17834 + chr2L 8538324 intron CG17834 + chr2L_6_8535001 chr2L_8535001 RAL-409_125b 245 chr2L 8629228 8629287 chr2L 8629355 8629414 9 126 7.0 5.5 6.2 1.2 186 chr2L 8629228 intron Sema-1a + chr2L 8629321 intron Sema-1a + chr2L 8629414 intron Sema-1a + chr2L_9_8625001 chr2L_8625001 RAL-409_125b 246 chr2L 8687041 8687091 chr2L 8687195 8687245 5 154 4.0 5.5 4.8 0.9 204 chr2L 8687041 3` UTR Trs23 + chr2L 8687143 intergenic Hnf4 -,Trs23 + chr2L 8687245 3` UTR Hnf4 - chr2L_5_8685001 chr2L_8685001 RAL-409_125b 247 chr2L 8698283 8698319 chr2L 8698472 8698508 5 189 14.5 0.5 7.5 0.6 225 chr2L 8698283 intron Hnf4 - chr2L 8698396 intron Hnf4 - chr2L 8698508 intron Hnf4 - chr2L_5_8695001 chr2L_8695001 RAL-409_125b 248 chr2L 8723101 8723140 chr2L 8731493 8731567 Tirant 7 8420 2.5 3.0 2.8 1.8 8466 chr2L 8723101 intron raw - chr2L 8727334 intron raw - chr2L 8731567 intron raw - chr2L_7_8725001 chr2L_8725001 RAL-409_125b 249 chr2L 8759942 8759995 chr2L 8760133 8760192 6 193 4.0 0.5 2.2 1.9 250 chr2L 8759942 intergenic not near genes chr2L 8760067 intergenic not near genes chr2L 8760192 intergenic not near genes chr2L_6_8760001 chr2L_8760001 RAL-409_125b 250 chr2L 8784659 8784725 chr2L 8784820 8784886 11 161 9.0 6.5 7.8 1.2 227 chr2L 8784659 intergenic not near genes chr2L 8784772 intergenic not near genes chr2L 8784886 intergenic not near genes chr2L_11_8780001 chr2L_8780001 RAL-409_125b 251 chr2L 8789273 8789339 chr2L 8789387 8789424 11 107 9.0 7.5 8.2 1.2 151 chr2L 8789273 intergenic not near genes chr2L 8789348 intergenic not near genes chr2L 8789424 intergenic not near genes chr2L_11_8785001 chr2L_8785001 RAL-409_125b 252 chr2L 8845716 8845750 chr2L 8845812 8845875 13 119 8.0 4.5 6.2 1.8 159 chr2L 8845716 intergenic not near genes chr2L 8845796 intergenic not near genes chr2L 8845875 intergenic not near genes chr2L_13_8845001 chr2L_8845001 RAL-409_125b 253 chr2L 8938361 8938432 chr2L 8938492 8938563 22 128 5.0 3.5 4.2 4.2 202 chr2L 8938361 intron Tsp29Fb + chr2L 8938462 intron Tsp29Fb + chr2L 8938563 intron Tsp29Fb + chr2L_22_8935001 chr2L_8935001 RAL-409_125b 254 chr2L 8956194 8956240 chr2L 8956316 8956379 4 127 1.0 0.0 0.5 2.7 185 chr2L 8956194 intron CG31886 - chr2L 8956286 intron CG31886 - chr2L 8956379 intron CG31886 - chr2L_4_8955001 chr2L_8955001 RAL-409_125b 255 chr2L 8985618 8985649 chr2L 8985823 8985852 4 204 11.0 2.5 6.8 0.5 234 chr2L 8985618 intergenic rost - chr2L 8985735 intergenic rost - chr2L 8985852 intergenic rost - chr2L_4_8985001 chr2L_8985001 RAL-409_125b 256 chr2L 8987942 8988012 chr2L 8988068 8988143 16 131 7.5 6.0 6.8 2.1 201 chr2L 8987942 intron rost - chr2L 8988042 intron rost - chr2L 8988143 intron rost - chr2L_16_8985001 chr2L_8985001 RAL-409_125b 257 chr2L 9000260 9000291 chr2L 9007815 9007851 roo 10 7558 6.0 10.0 8.0 1.1 7591 chr2L 9000260 intergenic Try29F + chr2L 9004056 intergenic not near genes chr2L 9007851 intergenic not near genes chr2L_10_9000001 chr2L_9000001 RAL-409_125b 258 chr2L 9084336 9084340 chr2L 16217660 16217660 9 7133321 15.5 24.5 20.0 0.4 7133324 chr2L 9084336 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_9_12650001 chr2L_12650001 RAL-409_125b 259 chr2L 9146088 9146126 chr2L 9146232 9146270 9 142 4.5 7.5 6.0 1.3 182 chr2L 9146088 intron CG32982 + chr2L 9146179 intron CG32982 + chr2L 9146270 intron CG32982 + chr2L_9_9145001 chr2L_9145001 RAL-409_125b 260 chr2L 9150630 9150672 chr2L 9150790 9150838 4 153 18.5 19.5 19.0 0.2 208 chr2L 9150630 intron CG32982 + chr2L 9150734 intron CG32982 + chr2L 9150838 intron CG32982 + chr2L_4_9150001 chr2L_9150001 RAL-409_125b 261 chr2L 9173056 9173064 chr2L 9173183 9173191 5 126 7.5 7.5 7.5 0.6 135 chr2L 9173056 intron tai + chr2L 9173124 intron tai + chr2L 9173191 intron tai + chr2L_5_9170001 chr2L_9170001 RAL-409_125b 262 chr2L 9202032 9202088 chr2L 9202137 9202184 19 112 7.0 7.0 7.0 2.4 152 chr2L 9202032 intron tai + chr2L 9202108 intron tai + chr2L 9202184 intron tai + chr2L_19_9200001 chr2L_9200001 RAL-409_125b 263 chr2L 9251094 9251169 chr2L 9251241 9251287 26 140 7.0 5.0 6.0 3.7 193 chr2L 9251094 intergenic aust -,borr - chr2L 9251190 intergenic aust -,borr - chr2L 9251287 intergenic borr -,aust - chr2L_26_9250001 chr2L_9250001 RAL-409_125b 264 chr2L 9259194 9259236 chr2L 9259309 9259361 11 114 6.0 8.0 7.0 1.4 167 chr2L 9259194 intron Ggamma30A + chr2L 9259278 intron Ggamma30A + chr2L 9259361 intron Ggamma30A + chr2L_11_9255001 chr2L_9255001 RAL-409_125b 265 chr2L 9264323 9264361 chr2L 9264460 9264505 8 145 8.0 7.5 7.8 0.9 182 chr2L 9264323 intron Ggamma30A + chr2L 9264414 intron Ggamma30A + chr2L 9264505 intron Ggamma30A + chr2L_8_9260001 chr2L_9260001 RAL-409_125b 266 chr2L 9270730 9270767 chr2L 9270845 9270898 13 128 6.0 4.5 5.2 2.1 168 chr2L 9270730 intron Ggamma30A + chr2L 9270814 intron Ggamma30A + chr2L 9270898 intron Ggamma30A + chr2L_13_9270001 chr2L_9270001 RAL-409_125b 267 chr2L 9278871 9278877 chr2L 9279006 9279012 5 135 9.0 2.5 5.8 0.7 141 chr2L 9278871 intron Ggamma30A + chr2L 9278942 intron Ggamma30A + chr2L 9279012 intron Ggamma30A + chr2L_5_9275001 chr2L_9275001 RAL-409_125b 268 chr2L 9279950 9280006 chr2L 9280094 9280147 5 141 1.0 4.5 2.8 1.3 197 chr2L 9279950 intron Ggamma30A + chr2L 9280048 intron Ggamma30A + chr2L 9280147 intron Ggamma30A + chr2L_5_9280001 chr2L_9280001 RAL-409_125b 269 chr2L 9283170 9283426 chr2L 9283318 9283558 15 134 2.0 1.5 1.8 5.4 388 chr2L 9283170 intron Ggamma30A + chr2L 9283364 intron Ggamma30A + chr2L 9283558 intron Ggamma30A + chr2L_15_9280001 chr2L_9280001 RAL-409_125b 270 chr2L 9297336 9297399 chr2L 9297463 9297501 18 124 5.5 9.5 7.5 2.1 165 chr2L 9297336 3` UTR Ggamma30A + chr2L 9297418 3` UTR Ggamma30A + chr2L 9297501 3` UTR Ggamma30A + chr2L_18_9295001 chr2L_9295001 RAL-409_125b 271 chr2L 9300665 9300713 chr2L 9300801 9300849 4 135 3.0 0.0 1.5 1.6 184 chr2L 9300665 3` UTR Ggamma30A + chr2L 9300757 3` UTR Ggamma30A + chr2L 9300849 3` UTR Ggamma30A + chr2L_4_9300001 chr2L_9300001 RAL-409_125b 272 chr2L 9303312 9303493 chr2L 9303465 9303620 11 136 0.5 0.0 0.2 9.2 308 chr2L 9303312 intergenic not near genes chr2L 9303466 intergenic not near genes chr2L 9303620 intergenic not near genes chr2L_11_9300001 chr2L_9300001 RAL-409_125b 273 chr2L 9304463 9304496 chr2L 9304591 9304625 12 129 4.0 6.0 5.0 2.0 162 chr2L 9304463 3` UTR CR42844 - chr2L 9304544 3` UTR CR42844 - chr2L 9304625 3` UTR CR42844 - chr2L_12_9300001 chr2L_9300001 RAL-409_125b 274 chr2L 9317383 9317394 chr2L 9317551 9317562 4 168 9.5 0.0 4.8 0.7 179 chr2L 9317383 intergenic not near genes chr2L 9317472 intergenic not near genes chr2L 9317562 intergenic not near genes chr2L_4_9315001 chr2L_9315001 RAL-409_125b 275 chr2L 9317421 9317549 chr2L 9317813 9317876 4 359 0.0 8.0 4.0 0.8 455 chr2L 9317421 intergenic not near genes chr2L 9317648 intergenic not near genes chr2L 9317876 intergenic not near genes chr2L_4_9315001 chr2L_9315001 RAL-409_125b 276 chr2L 9321700 9321754 chr2L 9321826 9321880 13 124 7.5 5.5 6.5 1.7 180 chr2L 9321700 intergenic not near genes chr2L 9321790 intergenic not near genes chr2L 9321880 intergenic not near genes chr2L_13_9320001 chr2L_9320001 RAL-409_125b 277 chr2L 9337868 9337930 chr2L 9337995 9338057 7 127 5.5 4.5 5.0 1.2 189 chr2L 9337868 intron Eaat1 + chr2L 9337962 intron Eaat1 + chr2L 9338057 5` UTR Eaat1 + chr2L_7_9335001 chr2L_9335001 RAL-409_125b 278 chr2L 9346723 9346773 chr2L 9346862 9346910 9 137 6.0 0.0 3.0 2.2 187 chr2L 9346723 intergenic not near genes chr2L 9346816 intergenic not near genes chr2L 9346910 intergenic not near genes chr2L_9_9345001 chr2L_9345001 RAL-409_125b 279 chr2L 9380195 9380245 chr2L 9380340 9380382 9 144 6.0 4.5 5.2 1.5 187 chr2L 9380195 exon Shawl - chr2L 9380288 intron Shawl - chr2L 9380382 intron Shawl - chr2L_9_9380001 chr2L_9380001 RAL-409_125b 280 chr2L 9387209 9387270 chr2L 9387357 9387411 10 146 5.0 2.5 3.8 2.1 202 chr2L 9387209 intron Shawl - chr2L 9387310 intron Shawl - chr2L 9387411 intron,5` UTR Shawl -,Aldh + chr2L_10_9385001 chr2L_9385001 RAL-409_125b 281 chr2L 9393467 9393521 chr2L 9396484 9396538 jockey 9 3016 2.5 8.0 5.2 1.5 3071 chr2L 9393467 intron Shawl - chr2L 9395002 intron Shawl - chr2L 9396538 intron Shawl - chr2L_9_9395001 chr2L_9395001 RAL-409_125b 282 chr2L 9454929 9454986 chr2L 9455081 9455118 12 148 7.0 4.5 5.8 1.8 189 chr2L 9454929 intron numb + chr2L 9455024 intron numb + chr2L 9455118 intron numb + chr2L_12_9455001 chr2L_9455001 RAL-409_125b 283 chr2L 9456882 9456949 chr2L 9457013 9457080 8 129 2.0 3.5 2.8 2.1 198 chr2L 9456882 intron numb + chr2L 9456981 intron numb + chr2L 9457080 intron numb + chr2L_8_9455001 chr2L_9455001 RAL-409_125b 284 chr2L 9460713 9460779 chr2L 9460844 9460925 9 141 6.5 0.5 3.5 2.0 212 chr2L 9460713 exon numb + chr2L 9460819 intron numb + chr2L 9460925 intron numb + chr2L_9_9460001 chr2L_9460001 RAL-409_125b 285 chr2L 9506268 9506284 chr2L 9506444 9506455 5 175 5.0 3.0 4.0 1.0 187 chr2L 9506268 intron CG33298 + chr2L 9506362 intron CG33298 + chr2L 9506455 intron CG33298 + chr2L_5_9505001 chr2L_9505001 RAL-409_125b 286 chr2L 9632927 9632996 chr2L 9633099 9633168 15 170 6.0 3.0 4.5 2.7 241 chr2L 9632927 intergenic not near genes chr2L 9633048 intergenic not near genes chr2L 9633168 intergenic not near genes chr2L_15_9630001 chr2L_9630001 RAL-409_125b 287 chr2L 9711373 9711403 chr2L 9711710 9711724 9 334 8.0 7.5 7.8 1.0 351 chr2L 9711373 intergenic CG4364 -,Nckx30C - chr2L 9711548 3` UTR Nckx30C - chr2L 9711724 3` UTR Nckx30C - chr2L_9_9710001 chr2L_9710001 RAL-409_125b 288 chr2L 9719735 9719779 chr2L 9719863 9719907 7 130 0.0 3.0 1.5 2.8 172 chr2L 9719735 intron Nckx30C - chr2L 9719821 intron Nckx30C - chr2L 9719907 intron Nckx30C - chr2L_7_9715001 chr2L_9715001 RAL-409_125b 289 chr2L 9770740 9770763 chr2L 9770888 9770893 6 148 6.0 3.5 4.8 1.0 153 chr2L 9770740 intron ppk18 - chr2L 9770816 intron ppk18 - chr2L 9770893 exon ppk18 - chr2L_6_9770001 chr2L_9770001 RAL-409_125b 290 chr2L 9831180 9831186 chr2L 9831307 9831312 5 127 11.5 6.5 9.0 0.5 132 chr2L 9831180 intron nAChRalpha6 - chr2L 9831246 intron nAChRalpha6 - chr2L 9831312 intron nAChRalpha6 - chr2L_5_9830001 chr2L_9830001 RAL-409_125b 291 chr2L 9831197 9831245 chr2L 9831306 9831371 11 118 6.5 6.5 6.5 1.5 174 chr2L 9831197 intron nAChRalpha6 - chr2L 9831284 intron nAChRalpha6 - chr2L 9831371 intron nAChRalpha6 - chr2L_11_9830001 chr2L_9830001 RAL-409_125b 292 chr2L 9836356 9836412 chr2L 9836485 9836542 9 128 7.5 4.0 5.8 1.3 186 chr2L 9836356 intron nAChRalpha6 - chr2L 9836449 intron nAChRalpha6 - chr2L 9836542 intron nAChRalpha6 - chr2L_9_9835001 chr2L_9835001 RAL-409_125b 293 chr2L 9837393 9837446 chr2L 9837521 9837569 16 124 2.5 2.5 2.5 4.6 176 chr2L 9837393 intron nAChRalpha6 - chr2L 9837481 intron nAChRalpha6 - chr2L 9837569 intron nAChRalpha6 - chr2L_16_9835001 chr2L_9835001 RAL-409_125b 294 chr2L 9873090 9873164 chr2L 9873416 9873439 16 315 4.0 6.5 5.2 2.6 349 chr2L 9873090 intron nAChRalpha6 - chr2L 9873264 intron nAChRalpha6 - chr2L 9873439 intron nAChRalpha6 - chr2L_16_9870001 chr2L_9870001 RAL-409_125b 295 chr2L 9880970 9881019 chr2L 9881093 9881145 10 127 9.0 6.5 7.8 1.1 175 chr2L 9880970 intron nAChRalpha6 - chr2L 9881058 intron nAChRalpha6 - chr2L 9881145 intron nAChRalpha6 - chr2L_10_9880001 chr2L_9880001 RAL-409_125b 296 chr2L 9973707 9973752 chr2L 9980843 9980918 HMS-Beagle 12 7156 3.5 4.0 3.8 2.5 7211 chr2L 9973707 intergenic not near genes chr2L 9977312 intergenic not near genes chr2L 9980918 intergenic not near genes chr2L_12_9975001 chr2L_9975001 RAL-409_125b 297 chr2L 9986327 9986375 chr2L 9986447 9986498 18 121 6.0 6.0 6.0 2.6 171 chr2L 9986327 intron bib + chr2L 9986412 intron bib + chr2L 9986498 intron bib + chr2L_18_9985001 chr2L_9985001 RAL-409_125b 298 chr2L 10051718 10051747 chr2L 10051815 10051864 6 118 8.0 7.0 7.5 0.7 146 chr2L 10051718 5` UTR CR44874 + chr2L 10051791 5` UTR CR44874 + chr2L 10051864 5` UTR CR44874 + chr2L_6_10050001 chr2L_10050001 RAL-409_125b 299 chr2L 10095586 10095663 chr2L 10095716 10095787 19 128 6.0 6.0 6.0 2.7 201 chr2L 10095586 intron CG44153 - chr2L 10095686 intron CG44153 - chr2L 10095787 intron CG44153 - chr2L_19_10095001 chr2L_10095001 RAL-409_125b 300 chr2L 10105274 10105310 chr2L 10105394 10105398 5 112 7.5 13.5 10.5 0.4 124 chr2L 10105274 intron,intron CG44153 -,CG34109 + chr2L 10105336 intron,intron CG44153 -,CG34109 + chr2L 10105398 intron,intron CG44153 -,CG34109 + chr2L_5_10105001 chr2L_10105001 RAL-409_125b 301 chr2L 10114314 10114322 chr2L 10114464 10114482 4 155 1.5 3.5 2.5 1.1 168 chr2L 10114314 intron,intron CG44153 -,CG34109 + chr2L 10114398 intron,intron CG44153 -,CG34109 + chr2L 10114482 intron,intron CG44153 -,CG34109 + chr2L_4_10110001 chr2L_10110001 RAL-409_125b 302 chr2L 10114326 10114370 chr2L 10114460 10114520 18 148 1.5 3.5 2.5 5.1 194 chr2L 10114326 intron,intron CG44153 -,CG34109 + chr2L 10114423 intron,intron CG44153 -,CG34109 + chr2L 10114520 intron,intron CG44153 -,CG34109 + chr2L_18_10110001 chr2L_10110001 RAL-409_125b 303 chr2L 10131243 10131322 chr2L 10131384 10131464 16 138 4.0 4.0 4.0 3.2 221 chr2L 10131243 intron CG44153 - chr2L 10131354 intron CG44153 - chr2L 10131464 intron CG44153 - chr2L_16_10130001 chr2L_10130001 RAL-409_125b 304 chr2L 10156301 10156344 chr2L 10163801 10163844 blood 7 7505 6.5 5.0 5.8 1.0 7543 chr2L 10156301 intron,3` UTR CG44153 -,CG4839 + chr2L 10160072 intron CG44153 - chr2L 10163844 intron CG44153 - chr2L_7_10160001 chr2L_10160001 RAL-409_125b 305 chr2L 10180558 10180593 chr2L 10180671 10180694 4 115 5.5 0.0 2.8 1.1 136 chr2L 10180558 intergenic CG44153 - chr2L 10180626 intergenic CG44153 - chr2L 10180694 intergenic CG44153 - chr2L_4_10180001 chr2L_10180001 RAL-409_125b 306 chr2L 10209800 10209825 chr2L 10209927 10209942 8 125 8.5 1.5 5.0 1.3 142 chr2L 10209800 intergenic CR44845 +,CG5727 -,CG5731 - chr2L 10209871 3` UTR CG5727 - chr2L 10209942 3` UTR CG5727 - chr2L_8_10205001 chr2L_10205001 RAL-409_125b 307 chr2L 10294115 10294190 chr2L 10294240 10294320 9 126 4.0 0.5 2.2 2.8 205 chr2L 10294115 intron Hand - chr2L 10294218 intron Hand - chr2L 10294320 intron Hand - chr2L_9_10290001 chr2L_10290001 RAL-409_125b 308 chr2L 10348335 10348366 chr2L 10348468 10348499 13 132 7.0 0.0 3.5 2.9 164 chr2L 10348335 intron CG34367 - chr2L 10348417 intron CG34367 - chr2L 10348499 intron CG34367 - chr2L_13_10345001 chr2L_10345001 RAL-409_125b 309 chr2L 10458180 10458207 chr2L 10458326 10458353 5 145 0.0 3.5 1.8 1.8 173 chr2L 10458180 intron LM408 + chr2L 10458266 intron LM408 + chr2L 10458353 intron LM408 + chr2L_5_10455001 chr2L_10455001 RAL-409_125b 310 chr2L 10490228 10490299 chr2L 10490360 10490420 11 121 6.0 7.0 6.5 1.5 192 chr2L 10490228 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490324 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490420 3` UTR,3` UTR CG6144 +,CG13144 - chr2L_11_10490001 chr2L_10490001 RAL-409_125b 311 chr2L 10515316 10515390 chr2L 10515459 10515533 18 142 7.5 4.5 6.0 2.6 217 chr2L 10515316 intron,intron CG45083 -,Fatp - chr2L 10515424 intron,intron CG45083 -,Fatp - chr2L 10515533 intron,intron CG45083 -,Fatp - chr2L_18_10515001 chr2L_10515001 RAL-409_125b 312 chr2L 10531573 10531641 chr2L 10531715 10531782 8 141 0.0 5.5 2.8 2.1 209 chr2L 10531573 3` UTR Lip4 + chr2L 10531678 3` UTR Lip4 + chr2L 10531782 intergenic Lip4 +,CG18301 + chr2L_8_10530001 chr2L_10530001 RAL-409_125b 313 chr2L 10540824 10540876 chr2L 10540952 10540993 7 123 4.0 4.0 4.0 1.4 169 chr2L 10540824 intergenic not near genes chr2L 10540908 intergenic not near genes chr2L 10540993 intergenic not near genes chr2L_7_10540001 chr2L_10540001 RAL-409_125b 314 chr2L 10563888 10563936 chr2L 10564003 10564069 4 126 3.0 3.0 3.0 1.0 181 chr2L 10563888 intron Trim9 + chr2L 10563978 intron Trim9 + chr2L 10564069 intron Trim9 + chr2L_4_10560001 chr2L_10560001 RAL-409_125b 315 chr2L 10592792 10592868 chr2L 10600503 10600572 opus 16 7708 2.5 1.5 2.0 5.3 7780 chr2L 10592792 intron Trim9 + chr2L 10596682 intron Trim9 + chr2L 10600572 intron Trim9 + chr2L_16_10595001 chr2L_10595001 RAL-409_125b 316 chr2L 10609237 10609305 chr2L 10609367 10609440 12 131 7.0 7.0 7.0 1.5 203 chr2L 10609237 intron Trim9 + chr2L 10609338 intron Trim9 + chr2L 10609440 intron Trim9 + chr2L_12_10605001 chr2L_10605001 RAL-409_125b 317 chr2L 10640596 10640638 chr2L 10640735 10640749 9 135 6.0 2.0 4.0 1.8 153 chr2L 10640596 exon CG31872 + chr2L 10640672 exon CG31872 + chr2L 10640749 exon CG31872 + chr2L_9_10640001 chr2L_10640001 RAL-409_125b 318 chr2L 10688501 10688554 chr2L 10688627 10688679 6 126 1.5 3.5 2.5 1.7 178 chr2L 10688501 intergenic CG7294 - chr2L 10688590 intergenic CG7294 - chr2L 10688679 intergenic CG7294 - chr2L_6_10685001 chr2L_10685001 RAL-409_125b 319 chr2L 10787934 10787999 chr2L 10788077 10788125 4 139 2.0 2.0 2.0 1.3 191 chr2L 10787934 intron CG31869 - chr2L 10788030 intron CG31869 - chr2L 10788125 intron CG31869 - chr2L_4_10785001 chr2L_10785001 RAL-409_125b 320 chr2L 10803727 10803794 chr2L 10803857 10803919 9 132 5.0 5.0 5.0 1.5 192 chr2L 10803727 intergenic not near genes chr2L 10803823 intergenic Nos - chr2L 10803919 intergenic Nos - chr2L_9_10800001 chr2L_10800001 RAL-409_125b 321 chr2L 10836720 10836763 chr2L 10836844 10836881 11 125 14.0 6.5 10.2 1.0 161 chr2L 10836720 intron Nos - chr2L 10836800 intron Nos - chr2L 10836881 intron Nos - chr2L_11_10835001 chr2L_10835001 RAL-409_125b 322 chr2L 10852125 10852154 chr2L 10852264 10852293 10 138 12.0 9.0 10.5 0.9 168 chr2L 10852125 intron CG43129 + chr2L 10852209 intron CG43129 + chr2L 10852293 intron CG43129 + chr2L_10_10850001 chr2L_10850001 RAL-409_125b 323 chr2L 10862806 10862871 chr2L 10864466 10864493 Rt1c 8 1646 3.5 5.0 4.2 1.5 1687 chr2L 10862806 3` UTR CR43807 - chr2L 10863650 intron CR43807 - chr2L 10864493 3` UTR CR43807 - chr2L_8_10860001 chr2L_10860001 RAL-409_125b 324 chr2L 10912993 10912998 chr2L 10913068 10913119 5 117 3.5 6.5 5.0 0.8 126 chr2L 10912993 intergenic not near genes chr2L 10913056 intergenic not near genes chr2L 10913119 intergenic not near genes chr2L_5_10910001 chr2L_10910001 RAL-409_125b 325 chr2L 10919763 10919822 chr2L 10919897 10919936 14 129 6.5 5.0 5.8 2.1 173 chr2L 10919763 intron dpr2 - chr2L 10919850 intron dpr2 - chr2L 10919936 intron dpr2 - chr2L_14_10915001 chr2L_10915001 RAL-409_125b 326 chr2L 10945026 10945085 chr2L 10945335 10945381 12 306 4.0 6.0 5.0 2.0 355 chr2L 10945026 intron dpr2 - chr2L 10945204 intron dpr2 - chr2L 10945381 intron dpr2 - chr2L_12_10945001 chr2L_10945001 RAL-409_125b 327 chr2L 10946927 10946939 chr2L 10956177 10956199 roo 5 9256 8.0 8.0 8.0 0.6 9272 chr2L 10946927 intron dpr2 - chr2L 10951563 intron dpr2 - chr2L 10956199 intron dpr2 - chr2L_5_10950001 chr2L_10950001 RAL-409_125b 328 chr2L 10946942 10946977 chr2L 10956170 10956172 roo 10 9244 3.0 8.0 5.5 1.5 9230 chr2L 10946942 intron dpr2 - chr2L 10951557 intron dpr2 - chr2L 10956172 intron dpr2 - chr2L_10_10950001 chr2L_10950001 RAL-409_125b 329 chr2L 10959201 10959223 chr2L 10959329 10959347 7 128 6.0 5.0 5.5 1.1 146 chr2L 10959201 intron dpr2 - chr2L 10959274 intron dpr2 - chr2L 10959347 intron dpr2 - chr2L_7_10955001 chr2L_10955001 RAL-409_125b 330 chr2L 11055018 11055073 chr2L 11055148 11055208 9 132 6.0 3.5 4.8 1.6 190 chr2L 11055018 intron Samuel - chr2L 11055113 intron Samuel - chr2L 11055208 intron Samuel - chr2L_9_11055001 chr2L_11055001 RAL-409_125b 331 chr2L 11078465 11078484 chr2L 11078563 11078565 5 101 6.0 9.5 7.8 0.6 100 chr2L 11078465 intron AstC - chr2L 11078515 intron AstC - chr2L 11078565 intron AstC - chr2L_5_11075001 chr2L_11075001 RAL-409_125b 332 chr2L 11246716 11246777 chr2L 11246865 11246922 10 147 10.0 5.5 7.8 1.1 206 chr2L 11246716 intron ab + chr2L 11246819 intron ab + chr2L 11246922 intron ab + chr2L_10_11245001 chr2L_11245001 RAL-409_125b 333 chr2L 11292329 11292407 chr2L 11292460 11292503 25 128 2.5 7.0 4.8 4.3 174 chr2L 11292329 intergenic not near genes chr2L 11292416 intergenic not near genes chr2L 11292503 intergenic not near genes chr2L_25_11290001 chr2L_11290001 RAL-409_125b 334 chr2L 11315221 11315270 chr2L 11317675 11317724 G2 13 2449 3.0 5.0 4.0 2.6 2503 chr2L 11315221 intergenic not near genes chr2L 11316472 intergenic not near genes chr2L 11317724 intergenic not near genes chr2L_13_11315001 chr2L_11315001 RAL-409_125b 335 chr2L 11339693 11339730 chr2L 11339812 11339812 6 112 5.5 1.5 3.5 1.3 119 chr2L 11339693 intergenic not near genes chr2L 11339752 intergenic not near genes chr2L 11339812 intergenic not near genes chr2L_6_11335001 chr2L_11335001 RAL-409_125b 336 chr2L 11450076 11450156 chr2L 11450212 11450277 8 128 0.5 4.0 2.2 2.5 201 chr2L 11450076 intergenic not near genes chr2L 11450176 intergenic not near genes chr2L 11450277 intergenic not near genes chr2L_8_11450001 chr2L_11450001 RAL-409_125b 337 chr2L 11491087 11491133 chr2L 11491213 11491242 12 121 3.0 6.5 4.8 2.1 155 chr2L 11491087 intergenic not near genes chr2L 11491164 intergenic not near genes chr2L 11491242 intergenic not near genes chr2L_12_11490001 chr2L_11490001 RAL-409_125b 338 chr2L 11492673 11492702 chr2L 11492985 11492994 5 304 4.5 0.0 2.2 1.6 321 chr2L 11492673 intergenic not near genes chr2L 11492834 intergenic not near genes chr2L 11492994 intergenic not near genes chr2L_5_11490001 chr2L_11490001 RAL-409_125b 339 chr2L 11537149 11537186 chr2L 11537272 11537287 10 121 7.0 4.5 5.8 1.5 138 chr2L 11537149 intergenic CG43438 + chr2L 11537218 intergenic CG43438 + chr2L 11537287 intergenic CG43438 + chr2L_10_11535001 chr2L_11535001 RAL-409_125b 340 chr2L 11540549 11540608 chr2L 11548001 11548060 Tabor 10 7452 5.5 6.0 5.8 1.5 7511 chr2L 11540549 intergenic not near genes chr2L 11544304 intergenic not near genes chr2L 11548060 intergenic not near genes chr2L_10_11540001 chr2L_11540001 RAL-409_125b 341 chr2L 11563608 11563646 chr2L 11568852 11568900 copia 7 5245 5.5 4.0 4.8 1.2 5292 chr2L 11563608 intergenic not near genes chr2L 11566254 intergenic not near genes chr2L 11568900 intergenic not near genes chr2L_7_11565001 chr2L_11565001 RAL-409_125b 342 chr2L 11584630 11584653 chr2L 11584753 11584771 5 120 9.0 4.0 6.5 0.7 141 chr2L 11584630 intron kek2 + chr2L 11584700 intron kek2 + chr2L 11584771 intron kek2 + chr2L_5_11580001 chr2L_11580001 RAL-409_125b 343 chr2L 11609537 11609601 chr2L 11609810 11609874 11 270 0.5 1.0 0.8 6.1 337 chr2L 11609537 intron kek2 + chr2L 11609706 intron kek2 + chr2L 11609874 intron kek2 + chr2L_11_11605001 chr2L_11605001 RAL-409_125b 344 chr2L 11614053 11614085 chr2L 11615548 11615570 hopper2 7 1511 3.5 4.5 4.0 1.4 1517 chr2L 11614053 intron kek2 + chr2L 11614812 intron kek2 + chr2L 11615570 intron kek2 + chr2L_7_11610001 chr2L_11610001 RAL-409_125b 345 chr2L 11633126 11633194 chr2L 11633272 11633316 15 143 2.5 3.5 3.0 3.8 190 chr2L 11633126 intergenic not near genes chr2L 11633221 intergenic not near genes chr2L 11633316 intergenic not near genes chr2L_15_11630001 chr2L_11630001 RAL-409_125b 346 chr2L 11682925 11682983 chr2L 11683139 11683202 10 216 6.0 4.5 5.2 1.6 277 chr2L 11682925 intergenic not near genes chr2L 11683064 intergenic not near genes chr2L 11683202 intergenic not near genes chr2L_10_11680001 chr2L_11680001 RAL-409_125b 347 chr2L 11713487 11713520 chr2L 11720979 11721038 blood 9 7505 8.0 7.5 7.8 1.0 7551 chr2L 11713487 intergenic not near genes chr2L 11717262 intergenic not near genes chr2L 11721038 intergenic CR44143 + chr2L_9_11715001 chr2L_11715001 RAL-409_125b 348 chr2L 11726614 11726686 chr2L 11726783 11726811 18 162 7.0 9.0 8.0 2.0 197 chr2L 11726614 intergenic not near genes chr2L 11726712 intergenic not near genes chr2L 11726811 intergenic not near genes chr2L_18_11725001 chr2L_11725001 RAL-409_125b 349 chr2L 11743707 11743762 chr2L 11743828 11743874 16 123 6.5 7.0 6.8 2.1 167 chr2L 11743707 exon Vha100-5 + chr2L 11743790 intron,3` UTR Vha100-5 +,CR44144 - chr2L 11743874 exon,3` UTR Vha100-5 +,CR44144 - chr2L_16_11740001 chr2L_11740001 RAL-409_125b 350 chr2L 11769900 11769933 chr2L 11770026 11770046 7 122 7.5 5.5 6.5 0.9 146 chr2L 11769900 intergenic not near genes chr2L 11769973 intergenic not near genes chr2L 11770046 intergenic not near genes chr2L_7_11765001 chr2L_11765001 RAL-409_125b 351 chr2L 11780998 11781185 chr2L 11781127 11781311 6 129 1.5 4.0 2.8 1.6 313 chr2L 11780998 intergenic not near genes chr2L 11781154 intergenic not near genes chr2L 11781311 intergenic not near genes chr2L_6_11780001 chr2L_11780001 RAL-409_125b 352 chr2L 11825669 11825685 chr2L 11825785 11825789 5 117 8.5 0.0 4.2 1.0 120 chr2L 11825669 intron Pde1c - chr2L 11825729 intron Pde1c - chr2L 11825789 intron Pde1c - chr2L_5_11825001 chr2L_11825001 RAL-409_125b 353 chr2L 11841336 11841394 chr2L 11841464 11841522 5 128 4.5 2.0 3.2 1.2 186 chr2L 11841336 intron Pde1c - chr2L 11841429 intron Pde1c - chr2L 11841522 intron Pde1c - chr2L_5_11840001 chr2L_11840001 RAL-409_125b 354 chr2L 11856142 11856211 chr2L 11856363 11856432 10 220 4.5 5.5 5.0 1.7 290 chr2L 11856142 intron Pde1c - chr2L 11856287 intron Pde1c - chr2L 11856432 intron Pde1c - chr2L_10_11855001 chr2L_11855001 RAL-409_125b 355 chr2L 11892498 11892550 chr2L 11892636 11892689 14 138 4.0 2.0 3.0 3.5 191 chr2L 11892498 intron Pde1c - chr2L 11892594 intron Pde1c - chr2L 11892689 intron Pde1c - chr2L_14_11890001 chr2L_11890001 RAL-409_125b 356 chr2L 11951928 11951981 chr2L 11952066 11952118 10 136 7.5 5.5 6.5 1.3 190 chr2L 11951928 intergenic CR43314 - chr2L 11952023 intergenic CR43314 - chr2L 11952118 intergenic CR43314 - chr2L_10_11950001 chr2L_11950001 RAL-409_125b 357 chr2L 12067294 12067349 chr2L 12074396 12074451 297 12 7102 5.0 7.0 6.0 1.7 7157 chr2L 12067294 intergenic not near genes chr2L 12070872 intergenic not near genes chr2L 12074451 intergenic not near genes chr2L_12_12070001 chr2L_12070001 RAL-409_125b 358 chr2L 12132676 12132737 chr2L 12132812 12132873 11 135 7.5 5.0 6.2 1.5 197 chr2L 12132676 intron rho-6 - chr2L 12132774 intron rho-6 - chr2L 12132873 intron rho-6 - chr2L_11_12130001 chr2L_12130001 RAL-409_125b 359 chr2L 12175773 12175835 chr2L 12175897 12175926 9 126 3.5 0.0 1.8 3.2 153 chr2L 12175773 intron,intron aret +,atilla - chr2L 12175850 intron,intron aret +,atilla - chr2L 12175926 intron,intron aret +,atilla - chr2L_9_12175001 chr2L_12175001 RAL-409_125b 360 chr2L 12210001 12210046 chr2L 12210140 12210185 4 138 4.5 4.5 4.5 0.7 184 chr2L 12210001 intron,3` UTR aret +,CG31759 + chr2L 12210093 intron aret + chr2L 12210185 intron aret + chr2L_4_12210001 chr2L_12210001 RAL-409_125b 361 chr2L 12234001 12234057 chr2L 12234140 12234202 15 142 4.5 5.0 4.8 2.6 201 chr2L 12234001 intron aret + chr2L 12234102 intron aret + chr2L 12234202 intron aret + chr2L_15_12230001 chr2L_12230001 RAL-409_125b 362 chr2L 12253989 12254005 chr2L 12254131 12254142 5 141 10.5 1.0 5.8 0.7 153 chr2L 12253989 intron aret + chr2L 12254066 intron aret + chr2L 12254142 intron aret + chr2L_5_12250001 chr2L_12250001 RAL-409_125b 363 chr2L 12266065 12266123 chr2L 12266197 12266255 11 130 7.0 8.5 7.8 1.2 190 chr2L 12266065 intron aret + chr2L 12266160 intron aret + chr2L 12266255 intron aret + chr2L_11_12265001 chr2L_12265001 RAL-409_125b 364 chr2L 12269375 12269398 chr2L 12269497 12269526 9 127 7.5 7.0 7.2 1.1 151 chr2L 12269375 intron aret + chr2L 12269450 intron aret + chr2L 12269526 intron aret + chr2L_9_12265001 chr2L_12265001 RAL-409_125b 365 chr2L 12366818 12366885 chr2L 12366954 12367021 11 134 6.5 4.0 5.2 1.8 203 chr2L 12366818 intron bru-2 + chr2L 12366920 intron bru-2 + chr2L 12367021 intron bru-2 + chr2L_11_12365001 chr2L_12365001 RAL-409_125b 366 chr2L 12410968 12411016 chr2L 12411097 12411136 9 128 6.0 0.0 3.0 2.2 168 chr2L 12410968 intron vir-1 - chr2L 12411052 intron vir-1 - chr2L 12411136 intron vir-1 - chr2L_9_12410001 chr2L_12410001 RAL-409_125b 367 chr2L 12487877 12487911 chr2L 12488007 12488042 8 127 8.0 13.5 10.8 0.7 165 chr2L 12487877 intron bun - chr2L 12487960 intron bun - chr2L 12488042 intron bun - chr2L_8_12485001 chr2L_12485001 RAL-409_125b 368 chr2L 12500575 12500618 chr2L 12500701 12500744 8 125 4.5 8.5 6.5 1.1 169 chr2L 12500575 intron bun - chr2L 12500660 intron bun - chr2L 12500744 intron bun - chr2L_8_12500001 chr2L_12500001 RAL-409_125b 369 chr2L 12529202 12529380 chr2L 12529385 12529506 7 175 0.0 0.0 0.0 7.0 304 chr2L 12529202 intron bun - chr2L 12529354 intron bun - chr2L 12529506 intron bun - chr2L_7_12525001 chr2L_12525001 RAL-409_125b 370 chr2L 12558279 12558345 chr2L 12565458 12565518 HMS-Beagle 19 7167 3.5 10.0 6.8 2.4 7239 chr2L 12558279 intergenic not near genes chr2L 12561898 intergenic not near genes chr2L 12565518 intergenic not near genes chr2L_19_12560001 chr2L_12560001 RAL-409_125b 371 chr2L 12572451 12572506 chr2L 12572582 12572637 12 127 8.0 6.0 7.0 1.5 186 chr2L 12572451 intergenic not near genes chr2L 12572544 intergenic not near genes chr2L 12572637 intergenic not near genes chr2L_12_12570001 chr2L_12570001 RAL-409_125b 372 chr2L 12728877 12728898 chr2L 12729168 12729191 pogo 6 293 13.0 9.0 11.0 0.5 314 chr2L 12728877 intron MRP + chr2L 12729034 intron MRP + chr2L 12729191 exon MRP + chr2L_6_12725001 chr2L_12725001 RAL-409_125b 373 chr2L 12728913 12728947 chr2L 12729179 12729226 pogo 7 285 7.5 10.0 8.8 0.7 313 chr2L 12728913 intron MRP + chr2L 12729070 intron MRP + chr2L 12729226 exon MRP + chr2L_7_12725001 chr2L_12725001 RAL-409_125b 374 chr2L 12731018 12731081 chr2L 12735835 12735897 F-element 5 4814 4.5 4.0 4.2 1.0 4879 chr2L 12731018 intron MRP + chr2L 12733458 intron MRP + chr2L 12735897 intron MRP + chr2L_5_12730001 chr2L_12730001 RAL-409_125b 375 chr2L 12739131 12739197 chr2L 12743961 12744028 Doc 14 4828 8.5 4.0 6.2 1.9 4897 chr2L 12739131 exon MRP + chr2L 12741580 intron MRP + chr2L 12744028 exon MRP + chr2L_14_12740001 chr2L_12740001 RAL-409_125b 376 chr2L 12763806 12763869 chr2L 12764063 12764131 BS 6 261 0.0 0.0 0.0 6.0 325 chr2L 12763806 intergenic not near genes chr2L 12763968 intergenic not near genes chr2L 12764131 intergenic not near genes chr2L_6_12760001 chr2L_12760001 RAL-409_125b 377 chr2L 12781759 12781783 chr2L 12789251 12789276 Quasimodo 4 7493 12.0 5.5 8.8 0.4 7517 chr2L 12781759 intergenic not near genes chr2L 12785518 intergenic not near genes chr2L 12789276 intergenic not near genes chr2L_4_12785001 chr2L_12785001 RAL-409_125b 378 chr2L 12791580 12791612 chr2L 12795294 12795317 F-element 5 3711 7.0 9.5 8.2 0.5 3737 chr2L 12791580 intergenic not near genes chr2L 12793448 intergenic not near genes chr2L 12795317 intergenic not near genes chr2L_5_12790001 chr2L_12790001 RAL-409_125b 379 chr2L 12791617 12791624 chr2L 12795282 12795341 F-element 4 3700 5.5 7.0 6.2 0.6 3724 chr2L 12791617 intergenic not near genes chr2L 12793479 intergenic not near genes chr2L 12795341 intergenic not near genes chr2L_4_12790001 chr2L_12790001 RAL-409_125b 380 chr2L 12861662 12861729 chr2L 12863164 12863196 hobo 23 1502 1.5 3.5 2.5 6.6 1534 chr2L 12861662 intergenic not near genes chr2L 12862429 intergenic not near genes chr2L 12863196 intergenic not near genes chr2L_23_12860001 chr2L_12860001 RAL-409_125b 381 chr2L 12893982 12894046 chr2L 12895499 12895547 hobo 9 1496 2.0 9.0 5.5 1.4 1565 chr2L 12893982 intergenic not near genes chr2L 12894764 intergenic not near genes chr2L 12895547 intergenic not near genes chr2L_9_12890001 chr2L_12890001 RAL-409_125b 382 chr2L 12933811 12933880 chr2L 12941317 12941386 blood 15 7500 6.0 3.5 4.8 2.6 7575 chr2L 12933811 intergenic not near genes chr2L 12937598 intergenic not near genes chr2L 12941386 intergenic not near genes chr2L_15_12935001 chr2L_12935001 RAL-409_125b 383 chr2L 13036205 13036208 chr2L 13036497 13036497 X-element 4 291 15.0 6.5 10.8 0.3 292 chr2L 13036205 intron CG9932 - chr2L 13036351 intron CG9932 - chr2L 13036497 intron CG9932 - chr2L_4_13035001 chr2L_13035001 RAL-409_125b 384 chr2L 13036219 13036267 chr2L 13036495 13036549 X-element 16 289 8.0 6.5 7.2 2.0 330 chr2L 13036219 intron CG9932 - chr2L 13036384 intron CG9932 - chr2L 13036549 intron CG9932 - chr2L_16_13035001 chr2L_13035001 RAL-409_125b 385 chr2L 13109400 13109476 chr2L 13109578 13109613 12 172 5.5 5.0 5.2 1.9 213 chr2L 13109400 exon CG5142 + chr2L 13109506 intergenic CG5142 + chr2L 13109613 intergenic CG5142 + chr2L_12_13105001 chr2L_13105001 RAL-409_125b 386 chr2L 13139417 13139475 chr2L 13139546 13139607 10 126 8.0 9.5 8.8 1.0 190 chr2L 13139417 intergenic not near genes chr2L 13139512 intergenic not near genes chr2L 13139607 intergenic not near genes chr2L_10_13135001 chr2L_13135001 RAL-409_125b 387 chr2L 13147719 13147757 chr2L 13147835 13147878 4 122 17.5 17.0 17.2 0.2 159 chr2L 13147719 intergenic not near genes chr2L 13147798 intergenic not near genes chr2L 13147878 intergenic not near genes chr2L_4_13145001 chr2L_13145001 RAL-409_125b 388 chr2L 13150409 13150471 chr2L 13150600 13150660 10 192 4.0 5.5 4.8 1.7 251 chr2L 13150409 intergenic not near genes chr2L 13150534 intergenic not near genes chr2L 13150660 intergenic not near genes chr2L_10_13150001 chr2L_13150001 RAL-409_125b 389 chr2L 13152196 13152249 chr2L 13152312 13152375 6 107 9.0 7.5 8.2 0.7 179 chr2L 13152196 intergenic not near genes chr2L 13152286 intergenic not near genes chr2L 13152375 intergenic not near genes chr2L_6_13150001 chr2L_13150001 RAL-409_125b 390 chr2L 13154069 13154124 chr2L 13154190 13154203 5 114 3.5 0.0 1.8 1.8 134 chr2L 13154069 intergenic not near genes chr2L 13154136 intergenic not near genes chr2L 13154203 intergenic not near genes chr2L_5_13150001 chr2L_13150001 RAL-409_125b 391 chr2L 13334220 13334256 chr2L 13334431 13334467 8 208 3.5 5.5 4.5 1.5 247 chr2L 13334220 intergenic not near genes chr2L 13334344 intergenic not near genes chr2L 13334467 intergenic not near genes chr2L_8_13330001 chr2L_13330001 RAL-409_125b 392 chr2L 13341722 13341797 chr2L 13342385 13342460 17 655 6.0 3.5 4.8 2.9 738 chr2L 13341722 intergenic not near genes chr2L 13342091 intergenic not near genes chr2L 13342460 intergenic not near genes chr2L_17_13340001 chr2L_13340001 RAL-409_125b 393 chr2L 13362814 13362861 chr2L 13363063 13363111 7 248 2.5 6.0 4.2 1.3 297 chr2L 13362814 intergenic Nnp-1 - chr2L 13362962 intergenic Nnp-1 - chr2L 13363111 intergenic Nnp-1 - chr2L_7_13360001 chr2L_13360001 RAL-409_125b 394 chr2L 13405609 13405658 chr2L 13410445 13410484 Doc 11 4841 9.5 6.5 8.0 1.2 4875 chr2L 13405609 exon CG7110 + chr2L 13408046 intron CG7110 + chr2L 13410484 intron CG7110 + chr2L_11_13405001 chr2L_13405001 RAL-409_125b 395 chr2L 13432293 13432305 chr2L 13432409 13432417 5 120 7.5 2.5 5.0 0.8 124 chr2L 13432293 intron CG42784 + chr2L 13432355 intron CG42784 + chr2L 13432417 intron CG42784 + chr2L_5_13430001 chr2L_13430001 RAL-409_125b 396 chr2L 13449444 13449449 chr2L 13456930 13456935 Quasimodo 4 7485 9.0 9.5 9.2 0.4 7491 chr2L 13449444 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453190 intron CG42784 + chr2L 13456935 intron CG42784 + chr2L_4_13450001 chr2L_13450001 RAL-409_125b 397 chr2L 13449452 13449483 chr2L 13456928 13456959 Quasimodo 9 7483 6.0 9.5 7.8 1.0 7507 chr2L 13449452 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453206 intron CG42784 + chr2L 13456959 intron CG42784 + chr2L_9_13450001 chr2L_13450001 RAL-409_125b 398 chr2L 13481415 13481419 chr2L 13482072 13482076 jockey 4 657 10.5 8.0 9.2 0.4 661 chr2L 13481415 intron CG42784 + chr2L 13481746 intron CG42784 + chr2L 13482076 intron CG42784 + chr2L_4_13480001 chr2L_13480001 RAL-409_125b 399 chr2L 13481421 13481455 chr2L 13482069 13482107 jockey 7 650 8.5 7.5 8.0 0.8 686 chr2L 13481421 intron CG42784 + chr2L 13481764 intron CG42784 + chr2L 13482107 intron CG42784 + chr2L_7_13480001 chr2L_13480001 RAL-409_125b 400 chr2L 13499986 13500019 chr2L 13500356 13500389 7 368 4.5 7.5 6.0 1.0 403 chr2L 13499986 3` UTR CG42784 + chr2L 13500188 3` UTR CG42784 + chr2L 13500389 3` UTR CG42784 + chr2L_7_13500001 chr2L_13500001 RAL-409_125b 401 chr2L 13522251 13522289 chr2L 13527597 13527604 Transpac 8 5348 1.0 12.0 6.5 1.1 5353 chr2L 13522251 intron B4 - chr2L 13524928 intron B4 - chr2L 13527604 intron B4 - chr2L_8_13520001 chr2L_13520001 RAL-409_125b 402 chr2L 13560383 13560413 chr2L 13565244 13565284 F-element 8 4868 5.5 10.0 7.8 0.9 4901 chr2L 13560383 intron kuz + chr2L 13562834 intron kuz + chr2L 13565284 intron kuz + chr2L_8_13560001 chr2L_13560001 RAL-409_125b 403 chr2L 13598968 13599016 chr2L 13599121 13599163 7 150 5.5 1.5 3.5 1.6 195 chr2L 13598968 intron kuz + chr2L 13599066 intron kuz + chr2L 13599163 intron kuz + chr2L_7_13595001 chr2L_13595001 RAL-409_125b 404 chr2L 13605025 13605080 chr2L 13605132 13605207 6 104 7.0 6.0 6.5 0.8 182 chr2L 13605025 intron kuz + chr2L 13605116 intron kuz + chr2L 13605207 intron kuz + chr2L_6_13605001 chr2L_13605001 RAL-409_125b 405 chr2L 13672119 13672172 chr2L 13672249 13672304 13 131 7.5 5.5 6.5 1.7 185 chr2L 13672119 intron CG18507 + chr2L 13672212 3` UTR CG18507 + chr2L 13672304 intron CG18507 + chr2L_13_13670001 chr2L_13670001 RAL-409_125b 406 chr2L 13710932 13710999 chr2L 13711225 13711292 13 287 6.0 7.5 6.8 1.7 360 chr2L 13710932 intron CG31814 - chr2L 13711112 intron CG31814 - chr2L 13711292 intron CG31814 - chr2L_13_13710001 chr2L_13710001 RAL-409_125b 407 chr2L 13713085 13713133 chr2L 13713292 13713340 9 203 6.5 5.5 6.0 1.3 255 chr2L 13713085 intron CG31814 - chr2L 13713212 intron CG31814 - chr2L 13713340 intron CG31814 - chr2L_9_13710001 chr2L_13710001 RAL-409_125b 408 chr2L 13713523 13713573 chr2L 13713644 13713699 15 124 4.5 4.0 4.2 2.9 176 chr2L 13713523 intron CG31814 - chr2L 13713611 intron CG31814 - chr2L 13713699 intron CG31814 - chr2L_15_13710001 chr2L_13710001 RAL-409_125b 409 chr2L 13720020 13720087 chr2L 13720180 13720247 12 154 8.5 5.0 6.8 1.5 227 chr2L 13720020 intergenic not near genes chr2L 13720134 intergenic not near genes chr2L 13720247 intergenic not near genes chr2L_12_13720001 chr2L_13720001 RAL-409_125b 410 chr2L 13725704 13725764 chr2L 13725836 13725901 13 135 0.5 4.5 2.5 3.7 197 chr2L 13725704 intergenic not near genes chr2L 13725802 intergenic not near genes chr2L 13725901 intergenic not near genes chr2L_13_13725001 chr2L_13725001 RAL-409_125b 411 chr2L 13761249 13761316 chr2L 13761377 13761394 10 111 5.5 2.5 4.0 2.0 145 chr2L 13761249 intron TM9SF4 + chr2L 13761322 intron TM9SF4 + chr2L 13761394 intron TM9SF4 + chr2L_10_13760001 chr2L_13760001 RAL-409_125b 412 chr2L 13761793 13761833 chr2L 13762933 13762984 Doc 9 1155 7.5 5.5 6.5 1.2 1191 chr2L 13761793 intron TM9SF4 + chr2L 13762388 intron TM9SF4 + chr2L 13762984 intron TM9SF4 + chr2L_9_13760001 chr2L_13760001 RAL-409_125b 413 chr2L 13842085 13842163 chr2L 13842219 13842298 20 132 3.5 1.5 2.5 5.7 213 chr2L 13842085 intron CenG1A + chr2L 13842192 intron CenG1A + chr2L 13842298 intron CenG1A + chr2L_20_13840001 chr2L_13840001 RAL-409_125b 414 chr2L 13853043 13853095 chr2L 13862243 13862286 roo 8 9196 7.5 7.0 7.2 1.0 9243 chr2L 13853043 intron CenG1A + chr2L 13857664 intron CenG1A + chr2L 13862286 intron CenG1A + chr2L_8_13855001 chr2L_13855001 RAL-409_125b 415 chr2L 13913548 13913592 chr2L 13913711 13913755 13 162 10.0 7.5 8.8 1.3 207 chr2L 13913548 intergenic not near genes chr2L 13913652 intergenic not near genes chr2L 13913755 intergenic not near genes chr2L_13_13910001 chr2L_13910001 RAL-409_125b 416 chr2L 13918776 13918841 chr2L 13918903 13918978 10 135 4.5 3.5 4.0 2.0 202 chr2L 13918776 intron Ance-3 + chr2L 13918877 intron Ance-3 + chr2L 13918978 intron Ance-3 + chr2L_10_13915001 chr2L_13915001 RAL-409_125b 417 chr2L 13964397 13964449 chr2L 13964527 13964568 6 116 2.5 6.0 4.2 1.2 171 chr2L 13964397 exon NimB1 + chr2L 13964482 intron NimB1 + chr2L 13964568 exon NimB1 + chr2L_6_13960001 chr2L_13960001 RAL-409_125b 418 chr2L 13988249 13988393 chr2L 13988375 13988523 11 128 3.0 2.0 2.5 3.1 274 chr2L 13988249 intron rk - chr2L 13988386 intron rk - chr2L 13988523 intron rk - chr2L_11_13985001 chr2L_13985001 RAL-409_125b 419 chr2L 14063233 14063274 chr2L 14063364 14063405 5 130 8.5 8.0 8.2 0.5 172 chr2L 14063233 intron nAChRalpha5 + chr2L 14063319 intron nAChRalpha5 + chr2L 14063405 intron nAChRalpha5 + chr2L_5_14060001 chr2L_14060001 RAL-409_125b 420 chr2L 14063275 14063298 chr2L 14063357 14063424 6 121 5.5 7.5 6.5 0.8 149 chr2L 14063275 intron nAChRalpha5 + chr2L 14063350 intron nAChRalpha5 + chr2L 14063424 intron nAChRalpha5 + chr2L_6_14060001 chr2L_14060001 RAL-409_125b 421 chr2L 14222257 14222282 chr2L 14222394 14222413 4 133 8.5 5.5 7.0 0.5 156 chr2L 14222257 intron Dyrk2 - chr2L 14222335 intron Dyrk2 - chr2L 14222413 intron Dyrk2 - chr2L_4_14220001 chr2L_14220001 RAL-409_125b 422 chr2L 14222285 14222332 chr2L 14222391 14222444 10 122 3.5 5.0 4.2 1.9 159 chr2L 14222285 intron Dyrk2 - chr2L 14222364 intron Dyrk2 - chr2L 14222444 intron Dyrk2 - chr2L_10_14220001 chr2L_14220001 RAL-409_125b 423 chr2L 14236208 14236265 chr2L 14236344 14236411 8 142 4.5 1.0 2.8 2.1 203 chr2L 14236208 5` UTR CR44728 + chr2L 14236310 intergenic CR44728 + chr2L 14236411 intergenic CR44728 + chr2L_8_14235001 chr2L_14235001 RAL-409_125b 424 chr2L 14268555 14268611 chr2L 14268682 14268732 5 126 17.5 24.0 20.8 0.2 177 chr2L 14268555 intron wb + chr2L 14268644 intron wb + chr2L 14268732 intron wb + chr2L_5_14265001 chr2L_14265001 RAL-409_125b 425 chr2L 14374743 14374797 chr2L 14374875 14374932 6 136 3.5 4.5 4.0 1.2 189 chr2L 14374743 intergenic not near genes chr2L 14374838 intergenic not near genes chr2L 14374932 intergenic not near genes chr2L_6_14370001 chr2L_14370001 RAL-409_125b 426 chr2L 14419237 14419280 chr2L 14419838 14419849 9 602 6.0 7.0 6.5 1.2 612 chr2L 14419237 intergenic not near genes chr2L 14419543 intergenic not near genes chr2L 14419849 intergenic not near genes chr2L_9_14415001 chr2L_14415001 RAL-409_125b 427 chr2L 14462683 14462820 chr2L 14462815 14462966 6 142 2.5 2.5 2.5 1.7 283 chr2L 14462683 intergenic not near genes chr2L 14462824 intergenic not near genes chr2L 14462966 intergenic not near genes chr2L_6_14460001 chr2L_14460001 RAL-409_125b 428 chr2L 14463965 14463973 chr2L 14464087 14464102 4 126 15.5 8.5 12.0 0.3 137 chr2L 14463965 intergenic not near genes chr2L 14464034 intergenic not near genes chr2L 14464102 intergenic not near genes chr2L_4_14460001 chr2L_14460001 RAL-409_125b 429 chr2L 14463975 14464006 chr2L 14464081 14464138 11 122 9.0 6.5 7.8 1.2 163 chr2L 14463975 intergenic not near genes chr2L 14464056 intergenic not near genes chr2L 14464138 intergenic not near genes chr2L_11_14460001 chr2L_14460001 RAL-409_125b 430 chr2L 14503386 14503435 chr2L 14503515 14503559 13 128 5.5 5.0 5.2 2.1 173 chr2L 14503386 intergenic not near genes chr2L 14503472 intergenic not near genes chr2L 14503559 intergenic not near genes chr2L_13_14500001 chr2L_14500001 RAL-409_125b 431 chr2L 14525530 14525603 chr2L 14525662 14525690 9 125 5.0 5.5 5.2 1.5 160 chr2L 14525530 exon CG33648 + chr2L 14525610 exon CG33648 + chr2L 14525690 intergenic CG33648 + chr2L_9_14525001 chr2L_14525001 RAL-409_125b 432 chr2L 14549107 14549163 chr2L 14549228 14549289 17 121 6.0 6.0 6.0 2.4 182 chr2L 14549107 5` UTR CG4218 - chr2L 14549198 intergenic CG4218 - chr2L 14549289 intergenic CG4218 - chr2L_17_14545001 chr2L_14545001 RAL-409_125b 433 chr2L 14562279 14562336 chr2L 14562405 14562472 10 134 6.5 6.5 6.5 1.3 193 chr2L 14562279 intergenic not near genes chr2L 14562376 intergenic not near genes chr2L 14562472 intergenic not near genes chr2L_10_14560001 chr2L_14560001 RAL-409_125b 434 chr2L 14570688 14570716 chr2L 14570802 14570846 6 126 3.0 5.5 4.2 1.2 158 chr2L 14570688 intergenic not near genes chr2L 14570767 intergenic not near genes chr2L 14570846 intergenic not near genes chr2L_6_14570001 chr2L_14570001 RAL-409_125b 435 chr2L 14586172 14586232 chr2L 14586285 14586326 17 107 4.0 4.0 4.0 3.4 154 chr2L 14586172 intergenic not near genes chr2L 14586249 intergenic not near genes chr2L 14586326 intergenic not near genes chr2L_17_14585001 chr2L_14585001 RAL-409_125b 436 chr2L 14588343 14588410 chr2L 14588545 14588606 9 200 1.0 3.5 2.2 2.8 263 chr2L 14588343 intergenic CG42680 - chr2L 14588474 intergenic CG42680 - chr2L 14588606 intergenic CG42680 - chr2L_9_14585001 chr2L_14585001 RAL-409_125b 437 chr2L 14593048 14593080 chr2L 14593175 14593192 6 124 9.5 5.0 7.2 0.7 144 chr2L 14593048 intergenic not near genes chr2L 14593120 intergenic not near genes chr2L 14593192 intergenic not near genes chr2L_6_14590001 chr2L_14590001 RAL-409_125b 438 chr2L 14707165 14707217 chr2L 14707334 14707386 23 166 12.0 2.5 7.2 2.8 221 chr2L 14707165 intergenic not near genes chr2L 14707276 intergenic not near genes chr2L 14707386 intergenic not near genes chr2L_23_14705001 chr2L_14705001 RAL-409_125b 439 chr2L 14707575 14707613 chr2L 14708630 14708658 11 1054 13.0 39.5 26.2 0.4 1083 chr2L 14707575 intergenic not near genes chr2L 14708116 intergenic not near genes chr2L 14708658 intergenic not near genes chr2L_11_14705001 chr2L_14705001 RAL-409_125b 440 chr2L 14706738 14706803 chr2L 14708950 14709015 18 2214 36.0 37.0 36.5 0.5 2277 chr2L 14706738 intergenic not near genes chr2L 14707876 intergenic not near genes chr2L 14709015 intergenic not near genes chr2L_18_14705001 chr2L_14705001 RAL-409_125b 441 chr2L 14716564 14716635 chr2L 14716692 14716764 14 125 5.5 2.5 4.0 2.8 200 chr2L 14716564 intergenic not near genes chr2L 14716664 intergenic not near genes chr2L 14716764 intergenic not near genes chr2L_14_14715001 chr2L_14715001 RAL-409_125b 442 chr2L 14793838 14793908 chr2L 14793974 14794045 7 133 6.0 4.0 5.0 1.2 207 chr2L 14793838 intergenic not near genes chr2L 14793942 intergenic not near genes chr2L 14794045 intergenic CG18420 - chr2L_7_14790001 chr2L_14790001 RAL-409_125b 443 chr2L 14803841 14803905 chr2L 14809087 14809158 copia 15 5250 3.5 4.0 3.8 3.1 5317 chr2L 14803841 intergenic not near genes chr2L 14806500 intergenic not near genes chr2L 14809158 intergenic not near genes chr2L_15_14805001 chr2L_14805001 RAL-409_125b 444 chr2L 14840927 14840995 chr2L 14841065 14841129 8 137 11.5 9.5 10.5 0.7 202 chr2L 14840927 3` UTR CR43805 - chr2L 14841028 3` UTR CR43805 - chr2L 14841129 3` UTR CR43805 - chr2L_8_14840001 chr2L_14840001 RAL-409_125b 445 chr2L 14887655 14887676 chr2L 14887773 14887804 4 124 8.5 6.5 7.5 0.5 149 chr2L 14887655 intergenic not near genes chr2L 14887730 intergenic not near genes chr2L 14887804 intergenic not near genes chr2L_4_14885001 chr2L_14885001 RAL-409_125b 446 chr2L 14889914 14889981 chr2L 14890379 14890456 jockey 7 472 3.5 4.0 3.8 1.5 542 chr2L 14889914 intergenic not near genes chr2L 14890185 intergenic not near genes chr2L 14890456 intergenic not near genes chr2L_7_14890001 chr2L_14890001 RAL-409_125b 447 chr2L 14933334 14933366 chr2L 14933462 14933481 6 124 4.5 3.0 3.8 1.2 147 chr2L 14933334 intron CG42313 - chr2L 14933408 intron CG42313 - chr2L 14933481 intron CG42313 - chr2L_6_14930001 chr2L_14930001 RAL-409_125b 448 chr2L 14984353 14984387 chr2L 14992000 14992039 opus 5 7649 9.0 7.0 8.0 0.6 7686 chr2L 14984353 intron mol - chr2L 14988196 intron mol - chr2L 14992039 intron mol - chr2L_5_14985001 chr2L_14985001 RAL-409_125b 449 chr2L 15003502 15003569 chr2L 15003636 15003703 19 133 6.0 5.0 5.5 2.9 201 chr2L 15003502 intergenic not near genes chr2L 15003602 intergenic not near genes chr2L 15003703 intergenic not near genes chr2L_19_15000001 chr2L_15000001 RAL-409_125b 450 chr2L 15013105 15013170 chr2L 15013259 15013329 14 152 4.0 0.0 2.0 4.7 224 chr2L 15013105 intergenic CR43856 - chr2L 15013217 intergenic not near genes chr2L 15013329 intergenic not near genes chr2L_14_15010001 chr2L_15010001 RAL-409_125b 451 chr2L 15014612 15014653 chr2L 15014700 15014782 6 106 1.5 5.0 3.2 1.4 170 chr2L 15014612 intergenic not near genes chr2L 15014697 intergenic not near genes chr2L 15014782 intergenic not near genes chr2L_6_15010001 chr2L_15010001 RAL-409_125b 452 chr2L 15098508 15098541 chr2L 15098633 15098649 13 122 10.0 1.0 5.5 2.0 141 chr2L 15098508 intergenic not near genes chr2L 15098578 intergenic not near genes chr2L 15098649 intergenic not near genes chr2L_13_15095001 chr2L_15095001 RAL-409_125b 453 chr2L 15122731 15122807 chr2L 15122856 15122933 19 129 2.5 0.5 1.5 7.6 202 chr2L 15122731 intergenic not near genes chr2L 15122832 intergenic not near genes chr2L 15122933 intergenic not near genes chr2L_19_15120001 chr2L_15120001 RAL-409_125b 454 chr2L 15161200 15161268 chr2L 15161386 15161454 8 184 5.5 1.5 3.5 1.8 254 chr2L 15161200 intergenic CR44770 + chr2L 15161327 intergenic CR44770 + chr2L 15161454 intergenic CR44770 +,CG4168 - chr2L_8_15160001 chr2L_15160001 RAL-409_125b 455 chr2L 15240175 15240234 chr2L 15240336 15240395 17 159 5.0 4.0 4.5 3.1 220 chr2L 15240175 intron ZnT35C - chr2L 15240285 intron ZnT35C - chr2L 15240395 intron ZnT35C - chr2L_17_15240001 chr2L_15240001 RAL-409_125b 456 chr2L 15252937 15252994 chr2L 15253063 15253123 11 128 6.0 4.5 5.2 1.8 186 chr2L 15252937 intron dao + chr2L 15253030 intron dao + chr2L 15253123 intron dao + chr2L_11_15250001 chr2L_15250001 RAL-409_125b 457 chr2L 15287373 15287388 chr2L 15287506 15287516 5 131 7.0 1.0 4.0 1.0 143 chr2L 15287373 intergenic not near genes chr2L 15287444 intergenic not near genes chr2L 15287516 intergenic not near genes chr2L_5_15285001 chr2L_15285001 RAL-409_125b 458 chr2L 15312987 15313034 chr2L 15313126 15313178 13 134 5.0 5.5 5.2 2.1 191 chr2L 15312987 intergenic not near genes chr2L 15313082 intergenic not near genes chr2L 15313178 intergenic not near genes chr2L_13_15310001 chr2L_15310001 RAL-409_125b 459 chr2L 15403202 15403268 chr2L 15403330 15403396 4 127 2.0 0.0 1.0 2.0 194 chr2L 15403202 intergenic not near genes chr2L 15403299 intergenic not near genes chr2L 15403396 intergenic not near genes chr2L_4_15400001 chr2L_15400001 RAL-409_125b 460 chr2L 15446025 15446082 chr2L 15453520 15453574 blood 10 7512 2.0 1.5 1.8 3.6 7549 chr2L 15446025 intergenic not near genes chr2L 15449800 intergenic not near genes chr2L 15453574 intergenic not near genes chr2L_10_15445001 chr2L_15445001 RAL-409_125b 461 chr2L 15458217 15458227 chr2L 15458366 15458376 5 148 2.0 2.5 2.2 1.6 159 chr2L 15458217 intergenic not near genes chr2L 15458296 intergenic not near genes chr2L 15458376 intergenic not near genes chr2L_5_15455001 chr2L_15455001 RAL-409_125b 462 chr2L 15514283 15514296 chr2L 15514417 15514430 4 132 10.0 7.5 8.8 0.4 147 chr2L 15514283 intergenic not near genes chr2L 15514356 intergenic not near genes chr2L 15514430 intergenic not near genes chr2L_4_15510001 chr2L_15510001 RAL-409_125b 463 chr2L 15514300 15514327 chr2L 15514413 15514461 5 130 6.0 7.5 6.8 0.6 161 chr2L 15514300 intergenic not near genes chr2L 15514380 intergenic not near genes chr2L 15514461 intergenic not near genes chr2L_5_15510001 chr2L_15510001 RAL-409_125b 464 chr2L 15586365 15586437 chr2L 15593467 15593530 297 6 7099 6.0 4.5 5.2 1.0 7165 chr2L 15586365 intergenic not near genes chr2L 15589948 intergenic not near genes chr2L 15593530 intergenic not near genes chr2L_6_15585001 chr2L_15585001 RAL-409_125b 465 chr2L 15598749 15598764 chr2L 15598878 15598888 5 127 8.0 0.0 4.0 1.0 139 chr2L 15598749 intergenic not near genes chr2L 15598818 intergenic not near genes chr2L 15598888 intergenic not near genes chr2L_5_15595001 chr2L_15595001 RAL-409_125b 466 chr2L 15636625 15636691 chr2L 15636751 15636807 6 123 5.5 7.0 6.2 0.8 182 chr2L 15636625 intergenic not near genes chr2L 15636716 intergenic not near genes chr2L 15636807 intergenic not near genes chr2L_6_15635001 chr2L_15635001 RAL-409_125b 467 chr2L 15749985 15750261 chr2L 15750148 15750395 6 151 0.0 0.0 0.0 6.0 410 chr2L 15749985 intron l(2)35Di - chr2L 15750190 intron l(2)35Di - chr2L 15750395 intron l(2)35Di - chr2L_6_15750001 chr2L_15750001 RAL-409_125b 468 chr2L 15805599 15805610 chr2L 15805746 15805753 5 147 2.0 6.0 4.0 1.0 154 chr2L 15805599 intergenic not near genes chr2L 15805676 intergenic not near genes chr2L 15805753 intergenic not near genes chr2L_5_15805001 chr2L_15805001 RAL-409_125b 469 chr2L 15823304 15823372 chr2L 15823430 15823498 15 124 5.0 4.5 4.8 2.6 194 chr2L 15823304 intergenic CR44601 - chr2L 15823401 intergenic CR44601 - chr2L 15823498 intergenic not near genes chr2L_15_15820001 chr2L_15820001 RAL-409_125b 470 chr2L 15826857 15826892 chr2L 15829295 15829336 Tabor 13 2443 2.0 13.0 7.5 1.5 2479 chr2L 15826857 intergenic not near genes chr2L 15828096 intergenic not near genes chr2L 15829336 intergenic not near genes chr2L_13_15825001 chr2L_15825001 RAL-409_125b 471 chr2L 15954156 15954205 chr2L 15954263 15954336 5 123 4.0 4.0 4.0 1.0 180 chr2L 15954156 intron beat-Ib - chr2L 15954246 intron beat-Ib - chr2L 15954336 intron beat-Ib - chr2L_5_15950001 chr2L_15950001 RAL-409_125b 472 chr2L 15955998 15956003 chr2L 15957515 15957520 hobo 4 1517 10.5 7.5 9.0 0.4 1522 chr2L 15955998 intron beat-Ib - chr2L 15956759 intron beat-Ib - chr2L 15957520 intron beat-Ib - chr2L_4_15955001 chr2L_15955001 RAL-409_125b 473 chr2L 15956010 15956048 chr2L 15957506 15957554 hobo 9 1501 5.0 6.5 5.8 1.3 1544 chr2L 15956010 intron beat-Ib - chr2L 15956782 intron beat-Ib - chr2L 15957554 intron beat-Ib - chr2L_9_15955001 chr2L_15955001 RAL-409_125b 474 chr2L 16008654 16008678 chr2L 16008804 16008829 4 149 1.5 3.5 2.5 1.1 175 chr2L 16008654 intron beat-Ic + chr2L 16008742 intron beat-Ic + chr2L 16008829 intron beat-Ic + chr2L_4_16005001 chr2L_16005001 RAL-409_125b 475 chr2L 16058089 16058149 chr2L 16058272 16058330 7 186 4.5 6.0 5.2 1.1 241 chr2L 16058089 intron beat-Ia + chr2L 16058210 intron beat-Ia + chr2L 16058330 intron beat-Ia + chr2L_7_16055001 chr2L_16055001 RAL-409_125b 476 chr2L 16071771 16071771 chr2L 16217660 16217661 copia 37 145889 19.5 24.5 22.0 1.6 145890 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217661 intergenic not near genes chr2L_37_16140001 chr2L_16140001 RAL-409_125b 477 chr2L 16141100 16141182 chr2L 16146371 16146432 copia 5 5264 0.5 5.5 3.0 1.2 5332 chr2L 16141100 intergenic not near genes chr2L 16143766 intergenic not near genes chr2L 16146432 intergenic not near genes chr2L_5_16140001 chr2L_16140001 RAL-409_125b 478 chr2L 16153704 16153760 chr2L 16160802 16160878 297 14 7113 4.0 2.5 3.2 3.3 7174 chr2L 16153704 intergenic not near genes chr2L 16157291 intergenic not near genes chr2L 16160878 intergenic not near genes chr2L_14_16155001 chr2L_16155001 RAL-409_125b 479 chr2L 16197087 16197141 chr2L 16197808 16197867 5 722 10.5 5.5 8.0 0.6 780 chr2L 16197087 intergenic not near genes chr2L 16197477 intergenic not near genes chr2L 16197867 intergenic not near genes chr2L_5_16195001 chr2L_16195001 RAL-409_125b 480 chr2L 9084336 9084340 chr2L 16217660 16217660 10 7133321 15.5 24.5 20.0 0.5 7133324 chr2L 9084336 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_10_12650001 chr2L_12650001 RAL-409_125b 481 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 19 145889 19.5 24.5 22.0 0.8 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_19_16140001 chr2L_16140001 RAL-409_125b 482 chr2L 16241580 16241645 chr2L 16241714 16241773 7 131 2.5 5.5 4.0 1.4 193 chr2L 16241580 intergenic CG42817 +,CG42818 + chr2L 16241676 intergenic CG42817 +,CG42818 + chr2L 16241773 intergenic CG42818 +,CG42817 + chr2L_7_16240001 chr2L_16240001 RAL-409_125b 483 chr2L 16242024 16242065 chr2L 16242165 16242202 11 140 4.0 0.0 2.0 3.7 178 chr2L 16242024 5` UTR CG42818 + chr2L 16242113 exon CG42818 + chr2L 16242202 exon CG42818 + chr2L_11_16240001 chr2L_16240001 RAL-409_125b 484 chr2L 16243680 16243698 chr2L 16243793 16243821 6 122 0.5 0.0 0.2 5.0 141 chr2L 16243680 exon CG42818 + chr2L 16243750 exon CG42818 + chr2L 16243821 exon CG42818 + chr2L_6_16240001 chr2L_16240001 RAL-409_125b 485 chr2L 16243704 16243858 chr2L 16243780 16243998 16 136 0.0 0.0 0.0 16.0 294 chr2L 16243704 exon CG42818 + chr2L 16243851 exon CG42818 + chr2L 16243998 exon CG42818 + chr2L_16_16240001 chr2L_16240001 RAL-409_125b 486 chr2L 16254847 16254919 chr2L 16255156 16255228 11 309 6.0 3.0 4.5 2.0 381 chr2L 16254847 intron PRL-1 - chr2L 16255038 intron PRL-1 - chr2L 16255228 intron PRL-1 - chr2L_11_16255001 chr2L_16255001 RAL-409_125b 487 chr2L 16280247 16280281 chr2L 16281433 16281434 1360 10 1193 7.0 9.0 8.0 1.1 1187 chr2L 16280247 intron crp - chr2L 16280840 intron crp - chr2L 16281434 intron crp - chr2L_10_16280001 chr2L_16280001 RAL-409_125b 488 chr2L 16363912 16363966 chr2L 16364208 16364262 11 296 1.5 9.5 5.5 1.7 350 chr2L 16363912 intergenic not near genes chr2L 16364087 intergenic not near genes chr2L 16364262 intergenic not near genes chr2L_11_16360001 chr2L_16360001 RAL-409_125b 489 chr2L 16432582 16432602 chr2L 16432728 16432749 6 145 0.5 5.5 3.0 1.5 167 chr2L 16432582 intron CG5888 - chr2L 16432666 intron CG5888 - chr2L 16432749 intron CG5888 - chr2L_6_16430001 chr2L_16430001 RAL-409_125b 490 chr2L 16455763 16455837 chr2L 16455896 16455970 15 128 5.0 2.0 3.5 3.3 207 chr2L 16455763 intergenic not near genes chr2L 16455866 intergenic not near genes chr2L 16455970 intergenic not near genes chr2L_15_16455001 chr2L_16455001 RAL-409_125b 491 chr2L 16468225 16468302 chr2L 16468387 16468450 6 156 0.0 1.5 0.8 3.3 225 chr2L 16468225 exon dac - chr2L 16468338 intron dac - chr2L 16468450 intron dac - chr2L_6_16465001 chr2L_16465001 RAL-409_125b 492 chr2L 16470815 16470882 chr2L 16470946 16471008 14 128 7.0 10.5 8.8 1.4 193 chr2L 16470815 intron dac - chr2L 16470912 intron dac - chr2L 16471008 intron dac - chr2L_14_16470001 chr2L_16470001 RAL-409_125b 493 chr2L 16507946 16507965 chr2L 16508074 16508103 6 136 0.0 12.0 6.0 0.9 157 chr2L 16507946 intergenic CG5953 -,Tpr2 + chr2L 16508024 intergenic CG5953 -,Tpr2 + chr2L 16508103 3` UTR CG5953 - chr2L_6_16505001 chr2L_16505001 RAL-409_125b 494 chr2L 16511928 16511979 chr2L 16519175 16519219 HMS-Beagle 6 7250 2.5 9.0 5.8 0.9 7291 chr2L 16511928 intron CG5953 - chr2L 16515574 intron CG5953 - chr2L 16519219 intron CG5953 - chr2L_6_16515001 chr2L_16515001 RAL-409_125b 495 chr2L 16544119 16544136 chr2L 16544240 16544264 9 126 6.5 7.5 7.0 1.1 145 chr2L 16544119 intergenic not near genes chr2L 16544192 intergenic not near genes chr2L 16544264 intergenic not near genes chr2L_9_16540001 chr2L_16540001 RAL-409_125b 496 chr2L 16570140 16570153 chr2L 16570271 16570284 4 129 10.0 13.5 11.8 0.3 144 chr2L 16570140 intron CG42389 + chr2L 16570212 intron CG42389 + chr2L 16570284 intron CG42389 + chr2L_4_16570001 chr2L_16570001 RAL-409_125b 497 chr2L 16654400 16654470 chr2L 16654567 16654637 20 162 3.5 5.0 4.2 3.8 237 chr2L 16654400 intron CG42389 + chr2L 16654518 intron CG42389 + chr2L 16654637 intron CG42389 + chr2L_20_16650001 chr2L_16650001 RAL-409_125b 498 chr2L 16693882 16693936 chr2L 16694013 16694067 14 130 6.0 9.0 7.5 1.6 185 chr2L 16693882 intron grp + chr2L 16693974 intron grp + chr2L 16694067 intron grp + chr2L_14_16690001 chr2L_16690001 RAL-409_125b 499 chr2L 16695224 16695275 chr2L 16695348 16695409 15 130 3.5 2.5 3.0 3.8 185 chr2L 16695224 intron grp + chr2L 16695316 intron grp + chr2L 16695409 intron grp + chr2L_15_16695001 chr2L_16695001 RAL-409_125b 500 chr2L 16697025 16697080 chr2L 16697263 16697323 12 241 8.5 3.5 6.0 1.7 298 chr2L 16697025 intron grp + chr2L 16697174 intron grp + chr2L 16697323 intron grp + chr2L_12_16695001 chr2L_16695001 RAL-409_125b 501 chr2L 16728873 16728949 chr2L 16729557 16729634 10 685 3.0 3.5 3.2 2.4 761 chr2L 16728873 intergenic not near genes chr2L 16729254 intergenic not near genes chr2L 16729634 intergenic CG31812 + chr2L_10_16725001 chr2L_16725001 RAL-409_125b 502 chr2L 16764926 16764988 chr2L 16765056 16765114 11 128 4.5 8.5 6.5 1.5 188 chr2L 16764926 intergenic not near genes chr2L 16765020 intergenic not near genes chr2L 16765114 intergenic not near genes chr2L_11_16765001 chr2L_16765001 RAL-409_125b 503 chr2L 16852732 16852794 chr2L 16859923 16859986 Doc4-element 5 7190 12.5 5.5 9.0 0.5 7254 chr2L 16852732 intergenic CG31810 - chr2L 16856359 intron CG31809 - chr2L 16859986 intergenic CG6012 - chr2L_5_16855001 chr2L_16855001 RAL-409_125b 504 chr2L 16866979 16867043 chr2L 16867123 16867188 11 144 2.5 6.0 4.2 2.1 209 chr2L 16866979 intergenic not near genes chr2L 16867084 intergenic not near genes chr2L 16867188 intergenic not near genes chr2L_11_16865001 chr2L_16865001 RAL-409_125b 505 chr2L 16872464 16872511 chr2L 16872570 16872626 14 125 9.0 6.5 7.8 1.6 162 chr2L 16872464 intron CR31781 + chr2L 16872545 intron CR31781 + chr2L 16872626 intron CR31781 + chr2L_14_16870001 chr2L_16870001 RAL-409_125b 506 chr2L 16952084 16952144 chr2L 16952223 16952270 5 135 0.0 8.0 4.0 1.0 186 chr2L 16952084 intergenic not near genes chr2L 16952177 intergenic not near genes chr2L 16952270 intergenic not near genes chr2L_5_16950001 chr2L_16950001 RAL-409_125b 507 chr2L 16958073 16958123 chr2L 16962911 16962920 Doc 13 4834 5.5 7.0 6.2 1.8 4847 chr2L 16958073 intergenic not near genes chr2L 16960496 intergenic not near genes chr2L 16962920 intergenic not near genes chr2L_13_16960001 chr2L_16960001 RAL-409_125b 508 chr2L 16987525 16987567 chr2L 16987641 16987693 12 123 5.0 5.0 5.0 2.0 168 chr2L 16987525 intron beat-IIIb + chr2L 16987609 intron beat-IIIb + chr2L 16987693 intron beat-IIIb + chr2L_12_16985001 chr2L_16985001 RAL-409_125b 509 chr2L 16991436 16991508 chr2L 16991585 16991659 8 147 4.5 6.0 5.2 1.3 223 chr2L 16991436 intron beat-IIIb + chr2L 16991548 intron beat-IIIb + chr2L 16991659 intron beat-IIIb + chr2L_8_16990001 chr2L_16990001 RAL-409_125b 510 chr2L 17019711 17019773 chr2L 17019843 17019871 18 122 3.5 6.5 5.0 3.0 160 chr2L 17019711 intergenic not near genes chr2L 17019791 intergenic not near genes chr2L 17019871 intergenic not near genes chr2L_18_17015001 chr2L_17015001 RAL-409_125b 511 chr2L 17062710 17062754 chr2L 17062842 17062886 6 131 3.0 2.0 2.5 1.7 176 chr2L 17062710 intergenic not near genes chr2L 17062798 intergenic not near genes chr2L 17062886 intergenic not near genes chr2L_6_17060001 chr2L_17060001 RAL-409_125b 512 chr2L 17070158 17070208 chr2L 17070304 17070354 8 144 5.0 1.0 3.0 2.0 196 chr2L 17070158 intergenic not near genes chr2L 17070256 intergenic not near genes chr2L 17070354 intergenic not near genes chr2L_8_17070001 chr2L_17070001 RAL-409_125b 513 chr2L 17101868 17101909 chr2L 17101982 17102036 4 120 8.0 4.0 6.0 0.6 168 chr2L 17101868 intergenic not near genes chr2L 17101952 intergenic not near genes chr2L 17102036 intergenic not near genes chr2L_4_17100001 chr2L_17100001 RAL-409_125b 514 chr2L 17102976 17103031 chr2L 17103114 17103169 10 134 2.0 9.5 5.8 1.5 193 chr2L 17102976 intergenic not near genes chr2L 17103072 intergenic not near genes chr2L 17103169 intergenic not near genes chr2L_10_17100001 chr2L_17100001 RAL-409_125b 515 chr2L 17120806 17120864 chr2L 17120921 17120984 11 123 4.5 5.0 4.8 1.9 178 chr2L 17120806 intergenic not near genes chr2L 17120895 intergenic not near genes chr2L 17120984 intergenic not near genes chr2L_11_17120001 chr2L_17120001 RAL-409_125b 516 chr2L 17158691 17158753 chr2L 17158832 17158906 7 137 1.5 2.0 1.8 2.5 215 chr2L 17158691 5` UTR,exon CG34106 +,beat-IIIa + chr2L 17158798 intron,intron CG34106 +,beat-IIIa + chr2L 17158906 intron,intron CG34106 +,beat-IIIa + chr2L_7_17155001 chr2L_17155001 RAL-409_125b 517 chr2L 17167523 17167591 chr2L 17167814 17167882 pogo 13 290 5.5 5.5 5.5 2.0 359 chr2L 17167523 intron,intron CG34106 +,beat-IIIa + chr2L 17167702 intron,intron CG34106 +,beat-IIIa + chr2L 17167882 intron,intron CG34106 +,beat-IIIa + chr2L_13_17165001 chr2L_17165001 RAL-409_125b 518 chr2L 17199122 17199164 chr2L 17200633 17200659 hobo 10 1514 6.0 3.5 4.8 1.7 1537 chr2L 17199122 intron beat-IIIc - chr2L 17199890 intron beat-IIIc - chr2L 17200659 intron beat-IIIc - chr2L_10_17195001 chr2L_17195001 RAL-409_125b 519 chr2L 17222526 17222574 chr2L 17223191 17223251 14 677 10.0 3.5 6.8 1.8 725 chr2L 17222526 intron beat-IIIc - chr2L 17222888 intron beat-IIIc - chr2L 17223251 intron beat-IIIc - chr2L_14_17220001 chr2L_17220001 RAL-409_125b 520 chr2L 17273150 17273221 chr2L 17277983 17277999 F-element 15 4821 2.0 2.0 2.0 5.0 4849 chr2L 17273150 intergenic not near genes chr2L 17275574 intergenic not near genes chr2L 17277999 intergenic not near genes chr2L_15_17275001 chr2L_17275001 RAL-409_125b 521 chr2L 17327876 17327926 chr2L 17328007 17328041 10 128 6.0 9.5 7.8 1.1 165 chr2L 17327876 intergenic not near genes chr2L 17327958 intergenic not near genes chr2L 17328041 intergenic not near genes chr2L_10_17325001 chr2L_17325001 RAL-409_125b 522 chr2L 17335494 17335522 chr2L 17336723 17336745 1360 5 1224 4.5 1.5 3.0 1.2 1251 chr2L 17335494 intergenic not near genes chr2L 17336120 intergenic not near genes chr2L 17336745 intergenic not near genes chr2L_5_17335001 chr2L_17335001 RAL-409_125b 523 chr2L 17424487 17424529 chr2L 17424844 17424886 7 355 8.0 2.5 5.2 1.1 399 chr2L 17424487 intron Dif - chr2L 17424686 intron Dif - chr2L 17424886 intron Dif - chr2L_7_17420001 chr2L_17420001 RAL-409_125b 524 chr2L 17425719 17425796 chr2L 17425895 17425973 11 174 6.5 6.0 6.2 1.5 254 chr2L 17425719 intron Dif - chr2L 17425846 intron Dif - chr2L 17425973 intron Dif - chr2L_11_17425001 chr2L_17425001 RAL-409_125b 525 chr2L 17623634 17623692 chr2L 17623914 17623972 12 277 9.0 2.0 5.5 1.8 338 chr2L 17623634 intergenic not near genes chr2L 17623803 intergenic not near genes chr2L 17623972 intergenic not near genes chr2L_12_17620001 chr2L_17620001 RAL-409_125b 526 chr2L 17637135 17637189 chr2L 17637265 17637324 10 134 5.0 5.5 5.2 1.6 189 chr2L 17637135 intergenic not near genes chr2L 17637230 intergenic not near genes chr2L 17637324 intergenic not near genes chr2L_10_17635001 chr2L_17635001 RAL-409_125b 527 chr2L 17675912 17675965 chr2L 17676030 17676094 9 126 6.0 4.0 5.0 1.5 182 chr2L 17675912 intron CadN - chr2L 17676003 intron CadN - chr2L 17676094 intron CadN - chr2L_9_17675001 chr2L_17675001 RAL-409_125b 528 chr2L 17687480 17687522 chr2L 17692275 17692317 F-element 12 4795 2.5 4.0 3.2 2.9 4837 chr2L 17687480 intron CadN - chr2L 17689898 intron CadN - chr2L 17692317 intron CadN - chr2L_12_17685001 chr2L_17685001 RAL-409_125b 529 chr2L 17692908 17692967 chr2L 17693072 17693131 15 158 7.0 7.5 7.2 1.8 223 chr2L 17692908 intron CadN - chr2L 17693020 intron CadN - chr2L 17693131 intron CadN - chr2L_15_17690001 chr2L_17690001 RAL-409_125b 530 chr2L 17723743 17723790 chr2L 17723886 17723917 8 139 7.0 7.5 7.2 1.0 174 chr2L 17723743 intron CadN - chr2L 17723830 intron CadN - chr2L 17723917 intron CadN - chr2L_8_17720001 chr2L_17720001 RAL-409_125b 531 chr2L 17727843 17727862 chr2L 17729344 17729379 hobo 10 1510 6.0 4.5 5.2 1.6 1536 chr2L 17727843 intron CadN - chr2L 17728611 intron CadN - chr2L 17729379 intron CadN - chr2L_10_17725001 chr2L_17725001 RAL-409_125b 532 chr2L 17741928 17741980 chr2L 17742044 17742106 13 124 7.5 7.0 7.2 1.6 178 chr2L 17741928 intron CadN - chr2L 17742017 intron CadN - chr2L 17742106 intron CadN - chr2L_13_17740001 chr2L_17740001 RAL-409_125b 533 chr2L 17747946 17748026 chr2L 17748073 17748143 20 117 9.5 9.0 9.2 2.0 197 chr2L 17747946 intron CadN - chr2L 17748044 intron CadN - chr2L 17748143 intron CadN - chr2L_20_17745001 chr2L_17745001 RAL-409_125b 534 chr2L 17819879 17819946 chr2L 17825131 17825199 copia 20 5248 7.0 5.0 6.0 2.9 5320 chr2L 17819879 intron CadN2 - chr2L 17822539 intron CadN2 - chr2L 17825199 intron CadN2 - chr2L_20_17820001 chr2L_17820001 RAL-409_125b 535 chr2L 17863594 17863630 chr2L 17863798 17863835 7 203 3.5 3.5 3.5 1.6 241 chr2L 17863594 intron CadN2 - chr2L 17863714 intron CadN2 - chr2L 17863835 intron CadN2 - chr2L_7_17860001 chr2L_17860001 RAL-409_125b 536 chr2L 17879990 17880022 chr2L 17880102 17880148 11 130 5.0 7.0 6.0 1.6 158 chr2L 17879990 intergenic not near genes chr2L 17880069 intergenic not near genes chr2L 17880148 intergenic not near genes chr2L_11_17880001 chr2L_17880001 RAL-409_125b 537 chr2L 17891424 17891488 chr2L 17891550 17891614 19 125 3.5 12.5 8.0 2.1 190 chr2L 17891424 intergenic not near genes chr2L 17891519 intergenic not near genes chr2L 17891614 intergenic not near genes chr2L_19_17890001 chr2L_17890001 RAL-409_125b 538 chr2L 17911927 17911975 chr2L 17914155 17914203 pogo 7 2227 5.5 5.5 5.5 1.1 2276 chr2L 17911927 intergenic not near genes chr2L 17913065 intergenic not near genes chr2L 17914203 intergenic CG43271 - chr2L_7_17910001 chr2L_17910001 RAL-409_125b 539 chr2L 17944382 17944434 chr2L 17944595 17944637 12 209 5.5 3.5 4.5 2.2 255 chr2L 17944382 intergenic not near genes chr2L 17944510 intergenic not near genes chr2L 17944637 intergenic not near genes chr2L_12_17940001 chr2L_17940001 RAL-409_125b 540 chr2L 17951899 17951965 chr2L 17953416 17953467 hobo 18 1515 5.5 6.0 5.8 2.6 1568 chr2L 17951899 intergenic CR44398 -,CR44397 - chr2L 17952683 intergenic not near genes chr2L 17953467 intergenic not near genes chr2L_18_17950001 chr2L_17950001 RAL-409_125b 541 chr2L 18051843 18051862 chr2L 18061030 18061059 roo 6 9195 9.5 4.0 6.8 0.8 9216 chr2L 18051843 intron rdo + chr2L 18056451 intron rdo + chr2L 18061059 intron rdo + chr2L_6_18055001 chr2L_18055001 RAL-409_125b 542 chr2L 18051870 18051899 chr2L 18061021 18061085 roo 10 9182 4.0 3.0 3.5 2.2 9215 chr2L 18051870 intron rdo + chr2L 18056478 intron rdo + chr2L 18061085 intron rdo + chr2L_10_18055001 chr2L_18055001 RAL-409_125b 543 chr2L 18095541 18095580 chr2L 18095672 18095680 10 127 9.0 7.0 8.0 1.1 139 chr2L 18095541 intergenic not near genes chr2L 18095610 intergenic not near genes chr2L 18095680 intergenic not near genes chr2L_10_18095001 chr2L_18095001 RAL-409_125b 544 chr2L 18188999 18189050 chr2L 18189960 18190006 17 950 4.5 8.5 6.5 2.3 1007 chr2L 18188999 intron CG42750 - chr2L 18189502 intron CG42750 - chr2L 18190006 intron CG42750 - chr2L_17_18185001 chr2L_18185001 RAL-409_125b 545 chr2L 18220579 18220599 chr2L 18220767 18220802 4 197 9.0 6.0 7.5 0.5 223 chr2L 18220579 intron CG42750 - chr2L 18220690 intron CG42750 - chr2L 18220802 intron CG42750 - chr2L_4_18220001 chr2L_18220001 RAL-409_125b 546 chr2L 18231113 18231132 chr2L 18231233 18231242 6 120 11.0 10.5 10.8 0.5 129 chr2L 18231113 intron CG42750 - chr2L 18231178 intron CG42750 - chr2L 18231242 intron CG42750 - chr2L_6_18230001 chr2L_18230001 RAL-409_125b 547 chr2L 18274004 18274073 chr2L 18274130 18274209 16 127 3.5 2.0 2.8 4.2 205 chr2L 18274004 intron CG42750 - chr2L 18274106 intron CG42750 - chr2L 18274209 intron CG42750 - chr2L_16_18270001 chr2L_18270001 RAL-409_125b 548 chr2L 18291493 18291513 chr2L 18291631 18291651 6 144 10.5 0.0 5.2 1.0 158 chr2L 18291493 intergenic CG43362 -,CR44693 +,CR44696 - chr2L 18291572 intergenic CR44693 +,CG43362 -,CR44696 - chr2L 18291651 intergenic CR44693 +,CG43362 -,CR44696 - chr2L_6_18290001 chr2L_18290001 RAL-409_125b 549 chr2L 18291554 18291563 chr2L 18291716 18291725 4 161 2.0 5.0 3.5 0.9 171 chr2L 18291554 intergenic CG43362 -,CR44693 +,CR44696 - chr2L 18291640 intergenic CR44693 +,CG43362 -,CR44696 - chr2L 18291725 5` UTR CR44693 + chr2L_4_18290001 chr2L_18290001 RAL-409_125b 550 chr2L 18303938 18303990 chr2L 18304079 18304131 9 139 4.5 3.0 3.8 1.9 193 chr2L 18303938 intergenic not near genes chr2L 18304034 intergenic not near genes chr2L 18304131 intergenic not near genes chr2L_9_18300001 chr2L_18300001 RAL-409_125b 551 chr2L 18407986 18408057 chr2L 18412820 18412899 Doc 11 4836 7.0 0.0 3.5 2.4 4913 chr2L 18407986 intergenic not near genes chr2L 18410442 intergenic not near genes chr2L 18412899 intergenic not near genes chr2L_11_18410001 chr2L_18410001 RAL-409_125b 552 chr2L 18440207 18440281 chr2L 18440327 18440405 4 122 5.0 2.0 3.5 0.9 198 chr2L 18440207 intergenic not near genes chr2L 18440306 intergenic not near genes chr2L 18440405 intergenic not near genes chr2L_4_18440001 chr2L_18440001 RAL-409_125b 553 chr2L 18442302 18442364 chr2L 18442431 18442493 7 125 8.0 9.5 8.8 0.7 191 chr2L 18442302 3` UTR RpS26 - chr2L 18442398 3` UTR RpS26 - chr2L 18442493 3` UTR RpS26 - chr2L_7_18440001 chr2L_18440001 RAL-409_125b 554 chr2L 18443347 18443365 chr2L 18443473 18443474 6 123 6.0 11.5 8.8 0.6 127 chr2L 18443347 intergenic RpS26 - chr2L 18443410 intergenic RpS26 - chr2L 18443474 intergenic RpS26 - chr2L_6_18440001 chr2L_18440001 RAL-409_125b 555 chr2L 18449347 18449413 chr2L 18449498 18449564 14 149 5.0 7.5 6.2 1.9 217 chr2L 18449347 intergenic bsf -,ncm - chr2L 18449456 intergenic bsf -,ncm - chr2L 18449564 3` UTR bsf - chr2L_14_18445001 chr2L_18445001 RAL-409_125b 556 chr2L 18462314 18462378 chr2L 18462475 18462559 5 175 6.0 2.0 4.0 1.0 245 chr2L 18462314 intron let-7-C + chr2L 18462436 intron let-7-C + chr2L 18462559 intron let-7-C + chr2L_5_18460001 chr2L_18460001 RAL-409_125b 557 chr2L 18464758 18464794 chr2L 18464875 18464927 10 129 4.5 4.5 4.5 1.8 169 chr2L 18464758 intron let-7-C + chr2L 18464842 intron let-7-C + chr2L 18464927 intron let-7-C + chr2L_10_18460001 chr2L_18460001 RAL-409_125b 558 chr2L 18535756 18535759 chr2L 18535893 18535896 4 137 0.0 2.5 1.2 1.8 140 chr2L 18535756 intron Pde11 - chr2L 18535826 intron Pde11 - chr2L 18535896 intron Pde11 - chr2L_4_18535001 chr2L_18535001 RAL-409_125b 559 chr2L 18538554 18538592 chr2L 18538680 18538721 9 129 1.0 6.0 3.5 2.0 167 chr2L 18538554 intron Pde11 - chr2L 18538638 intron Pde11 - chr2L 18538721 intron Pde11 - chr2L_9_18535001 chr2L_18535001 RAL-409_125b 560 chr2L 18628044 18628108 chr2L 18628282 18628359 16 240 7.0 5.0 6.0 2.3 315 chr2L 18628044 intron MESR3 + chr2L 18628202 intron MESR3 + chr2L 18628359 intron MESR3 + chr2L_16_18625001 chr2L_18625001 RAL-409_125b 561 chr2L 18811383 18811437 chr2L 18811515 18811563 11 131 3.0 4.0 3.5 2.4 180 chr2L 18811383 intergenic CG10570 -,CG42502 - chr2L 18811473 intergenic CG10570 -,CG42502 - chr2L 18811563 intergenic not near genes chr2L_11_18810001 chr2L_18810001 RAL-409_125b 562 chr2L 18812516 18812581 chr2L 18812820 18812889 16 305 0.0 5.5 2.8 4.2 373 chr2L 18812516 intergenic CG17325 +,CG42305 + chr2L 18812702 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812889 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_16_18810001 chr2L_18810001 RAL-409_125b 563 chr2L 18883815 18883882 chr2L 18883942 18884014 10 126 3.0 2.0 2.5 2.9 199 chr2L 18883815 intergenic not near genes chr2L 18883914 intergenic not near genes chr2L 18884014 intergenic not near genes chr2L_10_18880001 chr2L_18880001 RAL-409_125b 564 chr2L 18898375 18898414 chr2L 18898481 18898534 7 122 4.5 0.0 2.2 2.2 159 chr2L 18898375 intergenic not near genes chr2L 18898454 intergenic not near genes chr2L 18898534 intergenic not near genes chr2L_7_18895001 chr2L_18895001 RAL-409_125b 565 chr2L 18955260 18955267 chr2L 18955433 18955440 4 173 1.0 6.5 3.8 0.8 180 chr2L 18955260 intergenic CG10623 -,CR44741 + chr2L 18955350 intergenic CG10623 -,CR44741 + chr2L 18955440 intergenic CG10623 -,CR44741 + chr2L_4_18955001 chr2L_18955001 RAL-409_125b 566 chr2L 19024096 19024097 chr2L 21768291 21768291 5 2744194 13.5 19.0 16.2 0.3 2744195 chr2L 19024096 3` UTR CR43700 - chr2L 20396194 intron CG10947 - chr2L 21768291 intron CG31612 - chr2L_5_20395001 chr2L_20395001 RAL-409_125b 567 chr2L 19070270 19070293 chr2L 19070371 19070430 5 113 3.5 7.0 5.2 0.8 160 chr2L 19070270 intergenic CG10702 - chr2L 19070350 intergenic CG10702 - chr2L 19070430 intergenic not near genes chr2L_5_19070001 chr2L_19070001 RAL-409_125b 568 chr2L 19122734 19122799 chr2L 19122854 19122928 15 123 5.0 8.0 6.5 2.0 194 chr2L 19122734 exon l(2)37Cc - chr2L 19122831 intron l(2)37Cc - chr2L 19122928 intron l(2)37Cc - chr2L_15_19120001 chr2L_19120001 RAL-409_125b 569 chr2L 19147325 19147392 chr2L 19154410 19154466 297 16 7081 5.0 3.5 4.2 3.1 7141 chr2L 19147325 intron brat + chr2L 19150896 intron brat + chr2L 19154466 intron brat + chr2L_16_19150001 chr2L_19150001 RAL-409_125b 570 chr2L 19182970 19182998 chr2L 19183094 19183126 7 126 7.0 11.5 9.2 0.7 156 chr2L 19182970 intergenic CR17567 -,CG42688 - chr2L 19183048 intergenic CR17567 -,CG42688 - chr2L 19183126 3` UTR CR17567 - chr2L_7_19180001 chr2L_19180001 RAL-409_125b 571 chr2L 19183317 19183371 chr2L 19183447 19183501 16 128 2.5 11.0 6.8 2.1 184 chr2L 19183317 3` UTR CR17567 - chr2L 19183409 3` UTR CR17567 - chr2L 19183501 intron CR17567 - chr2L_16_19180001 chr2L_19180001 RAL-409_125b 572 chr2L 19246115 19246133 chr2L 19246222 19246266 5 117 4.0 10.0 7.0 0.6 151 chr2L 19246115 intergenic not near genes chr2L 19246190 intergenic not near genes chr2L 19246266 intergenic not near genes chr2L_5_19245001 chr2L_19245001 RAL-409_125b 573 chr2L 19344972 19345037 chr2L 19357230 19357280 blood 9 12257 3.5 5.5 4.5 1.6 12308 chr2L 19344972 intron dnt - chr2L 19351126 intron dnt - chr2L 19357280 intron dnt - chr2L_9_19350001 chr2L_19350001 RAL-409_125b 574 chr2L 19357498 19357564 chr2L 19357638 19357689 12 136 7.5 6.0 6.8 1.5 191 chr2L 19357498 intron dnt - chr2L 19357594 intron dnt - chr2L 19357689 intron dnt - chr2L_12_19355001 chr2L_19355001 RAL-409_125b 575 chr2L 19361841 19361908 chr2L 19361966 19361995 13 126 11.0 12.0 11.5 1.0 154 chr2L 19361841 intron dnt - chr2L 19361918 intron dnt - chr2L 19361995 intron dnt - chr2L_13_19360001 chr2L_19360001 RAL-409_125b 576 chr2L 19374454 19374512 chr2L 19374605 19374671 13 157 8.5 5.0 6.8 1.7 217 chr2L 19374454 intergenic not near genes chr2L 19374562 intergenic not near genes chr2L 19374671 intergenic not near genes chr2L_13_19370001 chr2L_19370001 RAL-409_125b 577 chr2L 19380486 19380528 chr2L 19380586 19380658 11 118 3.0 2.5 2.8 2.9 172 chr2L 19380486 intergenic CG17350 + chr2L 19380572 intergenic CG17350 + chr2L 19380658 intergenic CG17350 + chr2L_11_19380001 chr2L_19380001 RAL-409_125b 578 chr2L 19405583 19405642 chr2L 19405718 19405782 4 137 0.5 0.0 0.2 3.3 199 chr2L 19405583 intron Pax - chr2L 19405682 intron Pax - chr2L 19405782 intron Pax - chr2L_4_19405001 chr2L_19405001 RAL-409_125b 579 chr2L 19441015 19441065 chr2L 19441142 19441183 16 123 10.0 4.0 7.0 2.0 168 chr2L 19441015 intron CG10237 - chr2L 19441099 intron CG10237 - chr2L 19441183 5` UTR CG10237 - chr2L_16_19440001 chr2L_19440001 RAL-409_125b 580 chr2L 19452408 19452463 chr2L 19452563 19452649 16 164 4.5 2.0 3.2 3.8 241 chr2L 19452408 intron Top2 - chr2L 19452528 intron Top2 - chr2L 19452649 5` UTR Top2 - chr2L_16_19450001 chr2L_19450001 RAL-409_125b 581 chr2L 19544580 19544624 chr2L 19544670 19544697 6 89 6.0 5.0 5.5 0.9 117 chr2L 19544580 exon ref(2)P + chr2L 19544638 exon ref(2)P + chr2L 19544697 exon ref(2)P + chr2L_6_19540001 chr2L_19540001 RAL-409_125b 582 chr2L 19562495 19562560 chr2L 19562610 19562675 17 119 5.5 3.5 4.5 3.1 180 chr2L 19562495 exon Tep5 + chr2L 19562585 intron Tep5 + chr2L 19562675 exon Tep5 + chr2L_17_19560001 chr2L_19560001 RAL-409_125b 583 chr2L 19566129 19566160 chr2L 19566213 19566271 10 106 3.0 6.0 4.5 1.8 142 chr2L 19566129 5` UTR CG13077 + chr2L 19566200 exon CG13077 + chr2L 19566271 exon CG13077 + chr2L_10_19565001 chr2L_19565001 RAL-409_125b 584 chr2L 19605518 19605550 chr2L 19605607 19605633 9 98 4.5 6.0 5.2 1.5 115 chr2L 19605518 intron Lar + chr2L 19605576 intron Lar + chr2L 19605633 intron Lar + chr2L_9_19605001 chr2L_19605001 RAL-409_125b 585 chr2L 19620065 19620124 chr2L 19621084 19621098 jockey 15 1017 7.5 4.5 6.0 2.1 1033 chr2L 19620065 intron Lar + chr2L 19620582 intron Lar + chr2L 19621098 intron Lar + chr2L_15_19620001 chr2L_19620001 RAL-409_125b 586 chr2L 19627280 19627323 chr2L 19627408 19627451 4 130 5.5 6.0 5.8 0.6 171 chr2L 19627280 intron Lar + chr2L 19627366 intron Lar + chr2L 19627451 intron Lar + chr2L_4_19625001 chr2L_19625001 RAL-409_125b 587 chr2L 19652528 19652597 chr2L 19674012 19674081 opus 15 21480 3.5 7.0 5.2 2.4 21553 chr2L 19652528 intron Lar + chr2L 19663304 intron Lar + chr2L 19674081 intron Lar + chr2L_15_19660001 chr2L_19660001 RAL-409_125b 588 chr2L 19693213 19693234 chr2L 19697009 19697031 4 3798 15.0 25.5 20.2 0.2 3818 chr2L 19693213 intron Lar + chr2L 19695122 intron Lar + chr2L 19697031 intron Lar + chr2L_4_19695001 chr2L_19695001 RAL-409_125b 589 chr2L 19703499 19703564 chr2L 19712685 19712708 roo 18 9179 7.5 7.5 7.5 2.1 9209 chr2L 19703499 intron Lar + chr2L 19708104 intron Lar + chr2L 19712708 intron Lar + chr2L_18_19705001 chr2L_19705001 RAL-409_125b 590 chr2L 19718466 19718515 chr2L 19718620 19718663 5 153 2.5 6.0 4.2 1.0 197 chr2L 19718466 intron Lar + chr2L 19718564 intron Lar + chr2L 19718663 intron Lar + chr2L_5_19715001 chr2L_19715001 RAL-409_125b 591 chr2L 19737319 19737383 chr2L 19740825 19740862 1360 12 3495 3.5 3.5 3.5 2.7 3543 chr2L 19737319 intergenic Nf-YB + chr2L 19739090 intergenic not near genes chr2L 19740862 intergenic not near genes chr2L_12_19735001 chr2L_19735001 RAL-409_125b 592 chr2L 19762765 19762787 chr2L 19763057 19763071 pogo 5 287 9.0 1.5 5.2 0.8 306 chr2L 19762765 exon fbp - chr2L 19762918 intron fbp - chr2L 19763071 intron fbp - chr2L_5_19760001 chr2L_19760001 RAL-409_125b 593 chr2L 19762792 19762828 chr2L 19763053 19763120 pogo 12 288 5.0 1.5 3.2 2.9 328 chr2L 19762792 5` UTR fbp - chr2L 19762956 intron fbp - chr2L 19763120 intron fbp - chr2L_12_19760001 chr2L_19760001 RAL-409_125b 594 chr2L 19776625 19776659 chr2L 19776745 19776789 8 127 13.5 5.0 9.2 0.8 164 chr2L 19776625 3` UTR CdGAPr - chr2L 19776707 3` UTR CdGAPr - chr2L 19776789 3` UTR CdGAPr - chr2L_8_19775001 chr2L_19775001 RAL-409_125b 595 chr2L 19801111 19801181 chr2L 19801430 19801501 19 308 7.0 7.0 7.0 2.4 390 chr2L 19801111 intron sick + chr2L 19801306 intron sick + chr2L 19801501 intron sick + chr2L_19_19800001 chr2L_19800001 RAL-409_125b 596 chr2L 19824366 19824426 chr2L 19824499 19824558 12 130 5.0 8.5 6.8 1.5 192 chr2L 19824366 intron sick + chr2L 19824462 intron sick + chr2L 19824558 intron sick + chr2L_12_19820001 chr2L_19820001 RAL-409_125b 597 chr2L 19837241 19837303 chr2L 19837371 19837422 7 128 9.5 5.0 7.2 0.9 181 chr2L 19837241 intron sick + chr2L 19837332 intron sick + chr2L 19837422 intron sick + chr2L_7_19835001 chr2L_19835001 RAL-409_125b 598 chr2L 19854676 19854708 chr2L 19854806 19854844 7 131 8.0 6.0 7.0 0.9 168 chr2L 19854676 intron sick + chr2L 19854760 intron sick + chr2L 19854844 intron sick + chr2L_7_19850001 chr2L_19850001 RAL-409_125b 599 chr2L 19913015 19913063 chr2L 19913511 19913559 8 494 5.0 3.5 4.2 1.5 544 chr2L 19913015 intron,3` UTR sick +,Victoria - chr2L 19913287 intron,exon sick +,Victoria - chr2L 19913559 intron sick + chr2L_8_19910001 chr2L_19910001 RAL-409_125b 600 chr2L 19950166 19950199 chr2L 19950292 19950331 8 127 10.5 4.0 7.2 1.0 165 chr2L 19950166 intron sick + chr2L 19950248 intron sick + chr2L 19950331 intron sick + chr2L_8_19950001 chr2L_19950001 RAL-409_125b 601 chr2L 19950932 19950987 chr2L 19951412 19951473 20 489 4.5 7.5 6.0 2.9 541 chr2L 19950932 intron sick + chr2L 19951202 intron sick + chr2L 19951473 intron sick + chr2L_20_19950001 chr2L_19950001 RAL-409_125b 602 chr2L 19994596 19994655 chr2L 19994832 19994879 4 232 0.5 5.5 3.0 1.0 283 chr2L 19994596 intron CG43861 - chr2L 19994738 intron CG43861 - chr2L 19994879 intron CG43861 - chr2L_4_19990001 chr2L_19990001 RAL-409_125b 603 chr2L 20005843 20005892 chr2L 20010959 20010986 flea 10 5120 6.0 6.5 6.2 1.4 5143 chr2L 20005843 intron CG43861 - chr2L 20008414 intron CG43861 - chr2L 20010986 intron CG43861 - chr2L_10_20005001 chr2L_20005001 RAL-409_125b 604 chr2L 20014085 20014131 chr2L 20014297 20014343 17 209 8.5 7.5 8.0 1.9 258 chr2L 20014085 intron CG43861 - chr2L 20014214 intron CG43861 - chr2L 20014343 intron CG43861 - chr2L_17_20010001 chr2L_20010001 RAL-409_125b 605 chr2L 20036487 20036547 chr2L 20036621 20036681 13 133 8.5 9.0 8.8 1.3 194 chr2L 20036487 intron sNPF + chr2L 20036584 intron sNPF + chr2L 20036681 intron sNPF + chr2L_13_20035001 chr2L_20035001 RAL-409_125b 606 chr2L 20057680 20057722 chr2L 20057800 20057848 4 123 16.0 14.5 15.2 0.2 168 chr2L 20057680 intergenic barr - chr2L 20057764 intergenic barr - chr2L 20057848 intergenic barr - chr2L_4_20055001 chr2L_20055001 RAL-409_125b 607 chr2L 20079484 20079520 chr2L 20079645 20079691 12 169 7.0 3.0 5.0 2.0 207 chr2L 20079484 intron,intron neb +,fok - chr2L 20079588 intron,intron neb +,fok - chr2L 20079691 intron,intron neb +,fok - chr2L_12_20075001 chr2L_20075001 RAL-409_125b 608 chr2L 20085450 20085497 chr2L 20085556 20085629 13 121 1.0 4.5 2.8 3.4 179 chr2L 20085450 intron neb + chr2L 20085540 intron neb + chr2L 20085629 intron neb + chr2L_13_20085001 chr2L_20085001 RAL-409_125b 609 chr2L 20087216 20087273 chr2L 20087362 20087414 11 144 4.5 6.0 5.2 1.8 198 chr2L 20087216 intron neb + chr2L 20087315 intron neb + chr2L 20087414 intron neb + chr2L_11_20085001 chr2L_20085001 RAL-409_125b 610 chr2L 20124315 20124354 chr2L 20124437 20124477 13 126 5.5 8.5 7.0 1.6 162 chr2L 20124315 intergenic not near genes chr2L 20124396 intergenic not near genes chr2L 20124477 intergenic not near genes chr2L_13_20120001 chr2L_20120001 RAL-409_125b 611 chr2L 20225590 20225613 chr2L 20225718 20225741 6 125 7.5 8.0 7.8 0.7 151 chr2L 20225590 intergenic not near genes chr2L 20225666 intergenic not near genes chr2L 20225741 intergenic not near genes chr2L_6_20225001 chr2L_20225001 RAL-409_125b 612 chr2L 20269562 20269632 chr2L 20269836 20269901 17 266 7.5 9.5 8.5 1.8 339 chr2L 20269562 intergenic not near genes chr2L 20269732 intergenic not near genes chr2L 20269901 intergenic not near genes chr2L_17_20265001 chr2L_20265001 RAL-409_125b 613 chr2L 20271254 20271266 chr2L 20271346 20271399 5 115 7.0 6.5 6.8 0.6 145 chr2L 20271254 intergenic not near genes chr2L 20271326 intergenic not near genes chr2L 20271399 intergenic not near genes chr2L_5_20270001 chr2L_20270001 RAL-409_125b 614 chr2L 20272082 20272120 chr2L 20282843 20282881 copia 6 10761 5.5 7.5 6.5 0.8 10799 chr2L 20272082 intergenic not near genes chr2L 20277482 intergenic not near genes chr2L 20282881 intergenic not near genes chr2L_6_20275001 chr2L_20275001 RAL-409_125b 615 chr2L 20298778 20298850 chr2L 20298911 20298983 18 130 4.5 6.0 5.2 2.9 205 chr2L 20298778 intergenic not near genes chr2L 20298880 intergenic not near genes chr2L 20298983 intergenic not near genes chr2L_18_20295001 chr2L_20295001 RAL-409_125b 616 chr2L 20299972 20300021 chr2L 20300089 20300129 15 109 9.0 6.5 7.8 1.7 157 chr2L 20299972 intergenic not near genes chr2L 20300050 intergenic not near genes chr2L 20300129 intergenic not near genes chr2L_15_20300001 chr2L_20300001 RAL-409_125b 617 chr2L 20302946 20302974 chr2L 20303086 20303113 7 138 12.5 2.0 7.2 0.9 167 chr2L 20302946 intergenic not near genes chr2L 20303030 intergenic not near genes chr2L 20303113 intergenic not near genes chr2L_7_20300001 chr2L_20300001 RAL-409_125b 618 chr2L 20303136 20303175 chr2L 20310654 20310693 blood 5 7517 1.0 8.5 4.8 0.9 7557 chr2L 20303136 intergenic not near genes chr2L 20306914 intergenic not near genes chr2L 20310693 intergenic not near genes chr2L_5_20305001 chr2L_20305001 RAL-409_125b 619 chr2L 20310838 20310890 chr2L 20310958 20311012 9 126 3.5 4.0 3.8 1.9 174 chr2L 20310838 intergenic spir + chr2L 20310925 intergenic spir + chr2L 20311012 intergenic spir + chr2L_9_20310001 chr2L_20310001 RAL-409_125b 620 chr2L 20312543 20312564 chr2L 20312678 20312699 7 134 4.5 11.5 8.0 0.8 156 chr2L 20312543 intron spir + chr2L 20312621 intron spir + chr2L 20312699 intron spir + chr2L_7_20310001 chr2L_20310001 RAL-409_125b 621 chr2L 20321518 20321531 chr2L 20321631 20321657 5 123 6.0 12.0 9.0 0.5 139 chr2L 20321518 intron spir + chr2L 20321588 intron spir + chr2L 20321657 intron spir + chr2L_5_20320001 chr2L_20320001 RAL-409_125b 622 chr2L 20372191 20372236 chr2L 20372476 20372527 pogo 7 289 3.0 7.0 5.0 1.2 336 chr2L 20372191 intergenic Ugt37a1 - chr2L 20372359 intergenic Ugt37a1 - chr2L 20372527 exon Ugt37a1 - chr2L_7_20370001 chr2L_20370001 RAL-409_125b 623 chr2L 20498646 20498708 chr2L 20498789 20498857 17 145 5.5 8.5 7.0 2.1 211 chr2L 20498646 intergenic not near genes chr2L 20498752 intergenic not near genes chr2L 20498857 intergenic not near genes chr2L_17_20495001 chr2L_20495001 RAL-409_125b 624 chr2L 20568613 20568680 chr2L 20569053 20569120 X-element 11 433 5.5 3.0 4.2 2.1 507 chr2L 20568613 intron CR45347 + chr2L 20568866 intron CR45347 + chr2L 20569120 intron CR45347 + chr2L_11_20565001 chr2L_20565001 RAL-409_125b 625 chr2L 20571120 20571142 chr2L 20571219 20571264 7 121 8.0 9.0 8.5 0.7 144 chr2L 20571120 intron CR45347 + chr2L 20571192 intron CR45347 + chr2L 20571264 intron CR45347 + chr2L_7_20570001 chr2L_20570001 RAL-409_125b 626 chr2L 20576179 20576232 chr2L 20583691 20583750 blood 9 7510 4.0 5.5 4.8 1.6 7571 chr2L 20576179 intergenic CR45347 + chr2L 20579964 intergenic not near genes chr2L 20583750 3` UTR CR44909 - chr2L_9_20575001 chr2L_20575001 RAL-409_125b 627 chr2L 20611200 20611258 chr2L 20611320 20611367 4 126 2.0 4.5 3.2 1.0 167 chr2L 20611200 intron CR44909 - chr2L 20611284 intron CR44909 - chr2L 20611367 intron CR44909 - chr2L_4_20610001 chr2L_20610001 RAL-409_125b 628 chr2L 20639483 20639529 chr2L 20639788 20639849 INE-1 6 315 7.5 10.0 8.8 0.6 366 chr2L 20639483 intergenic not near genes chr2L 20639666 intergenic CG31680 + chr2L 20639849 intergenic CG31680 + chr2L_6_20635001 chr2L_20635001 RAL-409_125b 629 chr2L 20643307 20643337 chr2L 20643484 20643519 8 179 6.0 5.5 5.8 1.2 212 chr2L 20643307 intergenic phr6-4 -,CG17470 - chr2L 20643413 3` UTR phr6-4 - chr2L 20643519 3` UTR phr6-4 - chr2L_8_20640001 chr2L_20640001 RAL-409_125b 630 chr2L 20668661 20668704 chr2L 20668780 20668825 8 121 9.5 13.0 11.2 0.7 164 chr2L 20668661 intron CG31678 - chr2L 20668743 intron CG31678 - chr2L 20668825 intron CG31678 - chr2L_8_20665001 chr2L_20665001 RAL-409_125b 631 chr2L 20674792 20674863 chr2L 20674922 20674989 6 127 4.5 1.0 2.8 1.6 197 chr2L 20674792 intron CG31678 - chr2L 20674890 intron CG31678 - chr2L 20674989 intron CG31678 - chr2L_6_20670001 chr2L_20670001 RAL-409_125b 632 chr2L 20695746 20695825 chr2L 20695884 20695957 23 134 3.5 3.5 3.5 5.1 211 chr2L 20695746 intron Hr38 - chr2L 20695852 intron Hr38 - chr2L 20695957 intron Hr38 - chr2L_23_20695001 chr2L_20695001 RAL-409_125b 633 chr2L 20801648 20801680 chr2L 20801771 20801779 4 109 4.0 1.0 2.5 1.1 131 chr2L 20801648 intron CG9328 + chr2L 20801714 intron CG9328 + chr2L 20801779 intron CG9328 + chr2L_4_20800001 chr2L_20800001 RAL-409_125b 634 chr2L 20826476 20826537 chr2L 20826607 20826667 15 128 7.0 2.5 4.8 2.6 191 chr2L 20826476 intron CG9331 + chr2L 20826572 intron CG9331 + chr2L 20826667 exon CG9331 + chr2L_15_20825001 chr2L_20825001 RAL-409_125b 635 chr2L 20835765 20835832 chr2L 20836532 20836584 Quasimodo 12 764 6.0 6.5 6.2 1.7 819 chr2L 20835765 5` UTR Oseg5 - chr2L 20836174 intergenic Oseg5 -,Spn38F - chr2L 20836584 intergenic Spn38F - chr2L_12_20835001 chr2L_20835001 RAL-409_125b 636 chr2L 20839993 20840053 chr2L 20840243 20840315 17 258 5.0 4.0 4.5 3.1 322 chr2L 20839993 intergenic not near genes chr2L 20840154 intergenic not near genes chr2L 20840315 intergenic CG31676 + chr2L_17_20840001 chr2L_20840001 RAL-409_125b 637 chr2L 20846721 20846780 chr2L 20846855 20846901 10 129 8.5 4.5 6.5 1.3 180 chr2L 20846721 intron CG31676 + chr2L 20846811 intron CG31676 + chr2L 20846901 intron CG31676 + chr2L_10_20845001 chr2L_20845001 RAL-409_125b 638 chr2L 20891485 20891544 chr2L 20896636 20896695 jockey 13 5149 6.5 6.5 6.5 1.7 5210 chr2L 20891485 intron,intron CG43739 -,sky - chr2L 20894090 intron,intron CG43739 -,sky - chr2L 20896695 intron,intron CG43739 -,sky - chr2L_13_20890001 chr2L_20890001 RAL-409_125b 639 chr2L 20910989 20911056 chr2L 20911110 20911182 15 121 7.0 5.0 6.0 2.1 193 chr2L 20910989 intron,intron CG43739 -,sky - chr2L 20911086 intron,intron CG43739 -,sky - chr2L 20911182 intron,intron CG43739 -,sky - chr2L_15_20910001 chr2L_20910001 RAL-409_125b 640 chr2L 20946895 20946962 chr2L 20947031 20947054 14 129 2.5 4.0 3.2 3.3 159 chr2L 20946895 intergenic CR44606 - chr2L 20946974 intergenic CR44606 - chr2L 20947054 intergenic CR44606 - chr2L_14_20945001 chr2L_20945001 RAL-409_125b 641 chr2L 20967033 20967076 chr2L 20967169 20967212 12 134 4.5 5.0 4.8 2.1 179 chr2L 20967033 3` UTR CG42238 - chr2L 20967122 3` UTR CG42238 - chr2L 20967212 3` UTR CG42238 - chr2L_12_20965001 chr2L_20965001 RAL-409_125b 642 chr2L 20976611 20976659 chr2L 20981476 20981522 X-element 9 4859 4.0 7.5 5.8 1.3 4911 chr2L 20976611 intron CG42238 - chr2L 20979066 intron CG42238 - chr2L 20981522 intron CG42238 - chr2L_9_20975001 chr2L_20975001 RAL-409_125b 643 chr2L 20990988 20991069 chr2L 20991116 20991161 16 120 4.5 4.0 4.2 3.1 173 chr2L 20990988 intron CG42238 - chr2L 20991074 intron CG42238 - chr2L 20991161 intron CG42238 - chr2L_16_20990001 chr2L_20990001 RAL-409_125b 644 chr2L 21020237 21020299 chr2L 21023964 21024023 NOF 12 3722 9.0 2.5 5.8 1.8 3786 chr2L 21020237 intron CG42238 - chr2L 21022130 intron CG42238 - chr2L 21024023 intron CG42238 - chr2L_12_21020001 chr2L_21020001 RAL-409_125b 645 chr2L 21041094 21041161 chr2L 21049405 21049454 Tirant 10 8303 3.0 8.0 5.5 1.5 8360 chr2L 21041094 intron CG42238 - chr2L 21045274 intron CG42238 - chr2L 21049454 intron CG42238 - chr2L_10_21045001 chr2L_21045001 RAL-409_125b 646 chr2L 21074886 21074936 chr2L 21075016 21075077 7 139 7.0 4.0 5.5 1.1 191 chr2L 21074886 intergenic not near genes chr2L 21074982 intergenic tadr + chr2L 21075077 intergenic tadr + chr2L_7_21070001 chr2L_21070001 RAL-409_125b 647 chr2L 21086424 21086453 chr2L 21086584 21086601 9 159 9.0 9.0 9.0 0.9 177 chr2L 21086424 5` UTR CG33509 - chr2L 21086512 intergenic CG33509 -,ppk13 - chr2L 21086601 intergenic CG33509 -,ppk13 - chr2L_9_21085001 chr2L_21085001 RAL-409_125b 648 chr2L 21088873 21088941 chr2L 21089001 21089074 20 125 7.0 8.0 7.5 2.4 201 chr2L 21088873 intergenic ppk13 - chr2L 21088974 intergenic ppk13 -,CG9259 + chr2L 21089074 intergenic CG9259 +,ppk13 - chr2L_20_21085001 chr2L_21085001 RAL-409_125b 649 chr2L 21245259 21245294 chr2L 21245546 21245569 6 271 2.0 10.5 6.2 0.8 310 chr2L 21245259 intron Hr39 + chr2L 21245414 intron Hr39 + chr2L 21245569 intron Hr39 + chr2L_6_21245001 chr2L_21245001 RAL-409_125b 650 chr2L 21286565 21286621 chr2L 21286693 21286747 5 128 4.0 6.5 5.2 0.8 182 chr2L 21286565 exon Mio - chr2L 21286656 intron Mio - chr2L 21286747 intron Mio - chr2L_5_21285001 chr2L_21285001 RAL-409_125b 651 chr2L 21347511 21347564 chr2L 21355033 21355077 blood 9 7517 5.5 3.5 4.5 1.6 7566 chr2L 21347511 intron Tsp39D + chr2L 21351294 intron Tsp39D + chr2L 21355077 intron Tsp39D + chr2L_9_21350001 chr2L_21350001 RAL-409_125b 652 chr2L 21355568 21355595 chr2L 21355763 21355790 9 193 9.0 7.5 8.2 1.0 222 chr2L 21355568 exon Tsp39D + chr2L 21355679 intron Tsp39D + chr2L 21355790 intron Tsp39D + chr2L_9_21355001 chr2L_21355001 RAL-409_125b 653 chr2L 21355598 21355630 chr2L 21355756 21355810 9 187 5.5 6.5 6.0 1.3 212 chr2L 21355598 intron Tsp39D + chr2L 21355704 intron Tsp39D + chr2L 21355810 intron Tsp39D + chr2L_9_21355001 chr2L_21355001 RAL-409_125b 654 chr2L 21396588 21396604 chr2L 21396868 21396889 5 284 2.0 11.0 6.5 0.7 301 chr2L 21396588 intergenic not near genes chr2L 21396738 intergenic not near genes chr2L 21396889 intergenic not near genes chr2L_5_21395001 chr2L_21395001 RAL-409_125b 655 chr2L 21653171 21653214 chr2L 21656510 21656568 invader4 16 3352 5.0 5.0 5.0 2.7 3397 chr2L 21653171 intergenic not near genes chr2L 21654870 intergenic not near genes chr2L 21656568 intergenic not near genes chr2L_16_21650001 chr2L_21650001 RAL-409_125b 656 chr2L 21691794 21691835 chr2L 21698309 21698346 Burdock 5 6516 4.0 0.5 2.2 1.6 6552 chr2L 21691794 intron CG31619 + chr2L 21695070 intron CG31619 + chr2L 21698346 intron CG31619 + chr2L_5_21695001 chr2L_21695001 RAL-409_125b 657 chr2L 21747677 21747722 chr2L 21747958 21748003 5 281 5.0 4.5 4.8 0.9 326 chr2L 21747677 intron step - chr2L 21747840 intron step - chr2L 21748003 intron step - chr2L_5_21745001 chr2L_21745001 RAL-409_125b 658 chr2L 21750039 21750101 chr2L 21750322 21750384 9 301 7.0 3.5 5.2 1.5 345 chr2L 21750039 intron step - chr2L 21750212 intron step - chr2L 21750384 intron step - chr2L_9_21750001 chr2L_21750001 RAL-409_125b 659 chr2L 21755479 21755517 chr2L 21755638 21755678 7 166 4.0 8.5 6.2 1.0 199 chr2L 21755479 intron step - chr2L 21755578 intron step - chr2L 21755678 intron step - chr2L_7_21755001 chr2L_21755001 RAL-409_125b 660 chr2L 21771183 21771249 chr2L 21771340 21771406 14 153 5.5 5.5 5.5 2.2 223 chr2L 21771183 intron CG31612 - chr2L 21771294 intron CG31612 - chr2L 21771406 intron CG31612 - chr2L_14_21770001 chr2L_21770001 RAL-409_125b 661 chr2L 21771940 21772010 chr2L 21772069 21772119 14 126 8.0 8.0 8.0 1.6 179 chr2L 21771940 intron CG31612 - chr2L 21772030 intron CG31612 - chr2L 21772119 intron CG31612 - chr2L_14_21770001 chr2L_21770001 RAL-409_125b 662 chr2L 21819297 21819349 chr2L 21819418 21819476 12 121 4.0 4.5 4.2 2.3 179 chr2L 21819297 intergenic CR44786 + chr2L 21819386 intergenic CR44786 + chr2L 21819476 intergenic CR44786 + chr2L_12_21815001 chr2L_21815001 RAL-409_125b 663 chr2L 21855452 21855485 chr2L 21855590 21855623 6 138 7.0 1.0 4.0 1.2 171 chr2L 21855452 intron CR44917 + chr2L 21855538 intron CR44917 + chr2L 21855623 intron CR44917 + chr2L_6_21855001 chr2L_21855001 RAL-409_125b 664 chr2L 21882540 21882602 chr2L 21882667 21882733 10 130 6.0 7.5 6.8 1.3 193 chr2L 21882540 intergenic not near genes chr2L 21882636 intergenic not near genes chr2L 21882733 intergenic not near genes chr2L_10_21880001 chr2L_21880001 RAL-409_125b 665 chr2L 21981645 21981711 chr2L 21990855 21990881 roo 15 9200 4.5 5.0 4.8 2.6 9236 chr2L 21981645 exon CG2528 - chr2L 21986263 intron CG2528 - chr2L 21990881 exon CG2528 - chr2L_15_21985001 chr2L_21985001 RAL-409_125b 666 chr2L 21996898 21996972 chr2L 21997029 21997098 11 128 5.5 5.5 5.5 1.7 200 chr2L 21996898 intergenic not near genes chr2L 21996998 intergenic not near genes chr2L 21997098 intergenic not near genes chr2L_11_21995001 chr2L_21995001 RAL-409_125b 667 chr2L 22047216 22047232 chr2L 22047385 22047407 8 170 3.5 3.5 3.5 1.8 191 chr2L 22047216 intergenic not near genes chr2L 22047312 intergenic not near genes chr2L 22047407 intergenic not near genes chr2L_8_22045001 chr2L_22045001 RAL-409_125b 668 chr2L 22082203 22082212 chr2L 22082344 22082353 INE-1 4 141 9.0 8.5 8.8 0.4 150 chr2L 22082203 intergenic not near genes chr2L 22082278 intergenic not near genes chr2L 22082353 intergenic not near genes chr2L_4_22080001 chr2L_22080001 RAL-409_125b 669 chr2L 22239386 22239442 chr2L 22239517 22239573 13 125 7.0 7.5 7.2 1.6 187 chr2L 22239386 intron CR43765 - chr2L 22239480 3` UTR CR43765 - chr2L 22239573 3` UTR CR43765 - chr2L_13_22235001 chr2L_22235001 RAL-409_125b 670 chr2L 22258581 22258629 chr2L 22260755 22260803 G6 11 2173 9.0 9.5 9.2 1.1 2222 chr2L 22258581 intergenic Tif-IA + chr2L 22259692 intergenic not near genes chr2L 22260803 intergenic not near genes chr2L_11_22255001 chr2L_22255001 RAL-409_125b 671 chr2L 22515103 22515129 chr2L 22522603 22522629 HMS-Beagle2 7 7499 10.0 2.0 6.0 1.0 7526 chr2L 22515103 intergenic not near genes chr2L 22518866 intergenic not near genes chr2L 22522629 intergenic not near genes chr2L_7_22515001 chr2L_22515001 RAL-409_125b 672 chr2L 22545941 22546008 chr2L 22546077 22546139 15 130 7.0 6.0 6.5 2.0 198 chr2L 22545941 intron CG17490 + chr2L 22546040 intron CG17490 + chr2L 22546139 intron CG17490 + chr2L_15_22545001 chr2L_22545001 RAL-409_125b 673 chr2L 22548884 22548933 chr2L 22550132 22550208 1360 7 1259 1.5 7.5 4.5 1.3 1324 chr2L 22548884 intergenic CG17490 + chr2L 22549546 intergenic not near genes chr2L 22550208 intergenic CG17493 + chr2L_7_22545001 chr2L_22545001 RAL-409_125b 674 chr2L 22581931 22581996 chr2L 22583764 22583836 S-element 16 1838 3.5 5.0 4.2 3.1 1905 chr2L 22581931 intron CG17494 + chr2L 22582884 intron CG17494 + chr2L 22583836 intron CG17494 + chr2L_16_22580001 chr2L_22580001 RAL-409_125b 675 chr2L 22644127 22644193 chr2L 22644262 22644333 28 137 7.0 7.5 7.2 3.4 206 chr2L 22644127 intron CG40006 - chr2L 22644230 intron CG40006 - chr2L 22644333 intron CG40006 - chr2L_28_22640001 chr2L_22640001 RAL-409_125b 676 chr2L 22776378 22776451 chr2L 22778217 22778240 S-element 16 1835 4.5 6.0 5.2 2.6 1862 chr2L 22776378 intergenic not near genes chr2L 22777309 intergenic not near genes chr2L 22778240 intergenic not near genes chr2L_16_22775001 chr2L_22775001 RAL-409_125b 677 chr2L 23066157 23066207 chr2L 23067321 23067373 14 1177 27.5 29.0 28.2 0.5 1216 chr2L 23066157 intergenic not near genes chr2L 23066765 intergenic Spf45 - chr2L 23067373 exon Spf45 - chr2L_14_23065001 chr2L_23065001 RAL-409_125b 678 chr2R 291257 291308 chr2R 291401 291479 6 162 4.0 4.0 4.0 1.2 222 chr2R 291257 intergenic not near genes chr2R 291368 intergenic not near genes chr2R 291479 intergenic not near genes chr2R_6_290001 chr2R_290001 RAL-409_125b 679 chr2R 330246 330301 chr2R 330657 330712 9 406 3.5 3.0 3.2 2.1 466 chr2R 330246 intergenic not near genes chr2R 330479 intergenic not near genes chr2R 330712 intergenic not near genes chr2R_9_330001 chr2R_330001 RAL-409_125b 680 chr2R 469930 469975 chr2R 473210 473266 F-element 5 3275 2.5 3.0 2.8 1.3 3336 chr2R 469930 intergenic not near genes chr2R 471598 intergenic not near genes chr2R 473266 intergenic not near genes chr2R_5_470001 chr2R_470001 RAL-409_125b 681 chr2R 529316 529349 chr2R 537991 538016 Max-element 6 8673 5.0 9.0 7.0 0.8 8700 chr2R 529316 intron CG40378 + chr2R 533666 intron CG40378 + chr2R 538016 intron CG40378 + chr2R_6_530001 chr2R_530001 RAL-409_125b 682 chr2R 1338328 1338335 chr2R 1338459 1338463 5 129 12.5 24.0 18.2 0.3 135 chr2R 1338328 intergenic not near genes chr2R 1338396 intergenic not near genes chr2R 1338463 intergenic not near genes chr2R_5_1335001 chr2R_1335001 RAL-409_125b 683 chr2R 1516563 1516603 chr2R 1521341 1521381 1731 24 4777 17.5 17.0 17.2 1.3 4818 chr2R 1516563 exon Maf1 - chr2R 1518972 intron Maf1 - chr2R 1521381 5` UTR Maf1 - chr2R_24_1515001 chr2R_1515001 RAL-409_125b 684 chr2R 1729020 1729084 chr2R 1729231 1729270 6 202 4.0 6.0 5.0 1.0 250 chr2R 1729020 intron CG41520 + chr2R 1729145 intron CG41520 + chr2R 1729270 intron CG41520 + chr2R_6_1725001 chr2R_1725001 RAL-409_125b 685 chr2R 1984333 1984376 chr2R 1984626 1984680 5 295 4.0 3.0 3.5 1.1 347 chr2R 1984333 intron CG17684 - chr2R 1984506 intron CG17684 - chr2R 1984680 intron CG17684 - chr2R_5_1980001 chr2R_1980001 RAL-409_125b 686 chr2R 2015096 2015150 chr2R 2015218 2015274 10 120 3.0 3.5 3.2 2.4 178 chr2R 2015096 intron CG17684 - chr2R 2015185 intron CG17684 - chr2R 2015274 intron CG17684 - chr2R_10_2015001 chr2R_2015001 RAL-409_125b 687 chr2R 2110463 2110499 chr2R 2118071 2118107 17.6 5 7607 9.0 4.0 6.5 0.7 7644 chr2R 2110463 intron CG17684 - chr2R 2114285 intron CG17684 - chr2R 2118107 intron CG17684 - chr2R_5_2110001 chr2R_2110001 RAL-409_125b 688 chr2R 2498950 2499004 chr2R 2508147 2508201 roo 19 9194 3.5 6.0 4.8 3.3 9251 chr2R 2498950 intron MFS17 - chr2R 2503576 intron MFS17 - chr2R 2508201 intron MFS17 - chr2R_19_2500001 chr2R_2500001 RAL-409_125b 689 chr2R 2508265 2508309 chr2R 2508446 2508492 6 186 8.0 7.0 7.5 0.7 227 chr2R 2508265 intron MFS17 - chr2R 2508378 intron MFS17 - chr2R 2508492 intron MFS17 - chr2R_6_2505001 chr2R_2505001 RAL-409_125b 690 chr2R 2591496 2591507 chr2R 2594212 2594233 roo 4 2720 33.5 19.0 26.2 0.1 2737 chr2R 2591496 intergenic not near genes chr2R 2592864 intergenic not near genes chr2R 2594233 intergenic not near genes chr2R_4_2590001 chr2R_2590001 RAL-409_125b 691 chr2R 2875345 2875390 chr2R 2878900 2878911 HMS-Beagle 7 3557 32.0 35.0 33.5 0.2 3566 chr2R 2875345 intergenic not near genes chr2R 2877128 intergenic not near genes chr2R 2878911 intergenic not near genes chr2R_7_2875001 chr2R_2875001 RAL-409_125b 692 chr2R 3144041 3144107 chr2R 3393369 3393429 Doc 5 249324 22.0 5.0 13.5 0.3 249388 chr2R 3144041 intron CG42596 + chr2R 3268735 intergenic not near genes chr2R 3393429 intergenic not near genes chr2R_5_3265001 chr2R_3265001 RAL-409_125b 693 chr2R 3287364 3287389 chr2R 3287714 3287738 6 350 5.0 4.5 4.8 1.0 374 chr2R 3287364 intergenic not near genes chr2R 3287551 intergenic not near genes chr2R 3287738 intergenic not near genes chr2R_6_3285001 chr2R_3285001 RAL-409_125b 694 chr2R 3287394 3287408 chr2R 3287709 3287747 4 338 4.5 3.5 4.0 0.8 353 chr2R 3287394 intergenic not near genes chr2R 3287570 intergenic not near genes chr2R 3287747 intergenic not near genes chr2R_4_3285001 chr2R_3285001 RAL-409_125b 695 chr2R 3292613 3292669 chr2R 3292729 3292798 11 123 3.0 2.5 2.8 2.9 185 chr2R 3292613 intergenic not near genes chr2R 3292706 intergenic not near genes chr2R 3292798 intergenic not near genes chr2R_11_3290001 chr2R_3290001 RAL-409_125b 696 chr2R 3532585 3532616 chr2R 3536073 3536109 Doc 7 3492 4.5 7.5 6.0 1.0 3524 chr2R 3532585 intergenic not near genes chr2R 3534347 intergenic not near genes chr2R 3536109 intergenic not near genes chr2R_7_3530001 chr2R_3530001 RAL-409_125b 697 chr2R 4015281 4015344 chr2R 4015500 4015567 21 219 8.5 8.5 8.5 2.2 286 chr2R 4015281 intron Haspin + chr2R 4015424 intron Haspin + chr2R 4015567 intron Haspin + chr2R_21_4015001 chr2R_4015001 RAL-409_125b 698 chr2R 4134747 4134783 chr2R 4134853 4134906 4 118 3.0 3.0 3.0 1.0 159 chr2R 4134747 intergenic not near genes chr2R 4134826 intergenic not near genes chr2R 4134906 intergenic not near genes chr2R_4_4130001 chr2R_4130001 RAL-409_125b 699 chr2R 4604513 4604547 chr2R 4604642 4604651 4 123 13.5 5.5 9.5 0.4 138 chr2R 4604513 intron p120ctn + chr2R 4604582 intron p120ctn + chr2R 4604651 intron p120ctn + chr2R_4_4600001 chr2R_4600001 RAL-409_125b 700 chr2R 4604548 4604575 chr2R 4604640 4604699 12 122 6.0 5.5 5.8 1.8 151 chr2R 4604548 intron p120ctn + chr2R 4604624 intron p120ctn + chr2R 4604699 intron p120ctn + chr2R_12_4600001 chr2R_4600001 RAL-409_125b 701 chr2R 4617892 4617942 chr2R 4618194 4618249 5 311 1.5 8.5 5.0 0.8 357 chr2R 4617892 intergenic not near genes chr2R 4618070 intergenic not near genes chr2R 4618249 intergenic not near genes chr2R_5_4615001 chr2R_4615001 RAL-409_125b 702 chr2R 4622922 4622963 chr2R 4624120 4624161 1360 8 1196 8.0 8.5 8.2 0.9 1239 chr2R 4622922 intergenic CR44101 - chr2R 4623542 intergenic not near genes chr2R 4624161 intergenic not near genes chr2R_8_4620001 chr2R_4620001 RAL-409_125b 703 chr2R 4688098 4688125 chr2R 4688241 4688268 8 143 6.0 10.0 8.0 0.9 170 chr2R 4688098 intergenic not near genes chr2R 4688183 intergenic not near genes chr2R 4688268 intergenic not near genes chr2R_8_4685001 chr2R_4685001 RAL-409_125b 704 chr2R 4702455 4702497 chr2R 4702643 4702679 7 186 5.5 6.0 5.8 1.0 224 chr2R 4702455 intron Nipped-B - chr2R 4702567 intron Nipped-B - chr2R 4702679 intron Nipped-B - chr2R_7_4700001 chr2R_4700001 RAL-409_125b 705 chr2R 4731906 4731942 chr2R 4732039 4732075 6 131 7.0 4.5 5.8 0.9 169 chr2R 4731906 intergenic not near genes chr2R 4731990 intergenic not near genes chr2R 4732075 intergenic not near genes chr2R_6_4730001 chr2R_4730001 RAL-409_125b 706 chr2R 4783216 4783269 chr2R 4783397 4783453 12 179 5.5 7.0 6.2 1.7 237 chr2R 4783216 intergenic not near genes chr2R 4783334 intergenic not near genes chr2R 4783453 intergenic not near genes chr2R_12_4780001 chr2R_4780001 RAL-409_125b 707 chr2R 4821177 4821242 chr2R 4821305 4821378 11 132 5.0 5.5 5.2 1.8 201 chr2R 4821177 intron CG17528 - chr2R 4821278 intron CG17528 - chr2R 4821378 intron CG17528 - chr2R_11_4820001 chr2R_4820001 RAL-409_125b 708 chr2R 4838830 4838889 chr2R 4840398 4840461 transib2 16 1570 7.0 2.5 4.8 2.8 1631 chr2R 4838830 intergenic not near genes chr2R 4839646 intergenic not near genes chr2R 4840461 intergenic not near genes chr2R_16_4835001 chr2R_4835001 RAL-409_125b 709 chr2R 4870721 4870733 chr2R 4871254 4871289 R1A1-element 5 554 11.0 6.0 8.5 0.5 568 chr2R 4870721 intergenic not near genes chr2R 4871005 intergenic not near genes chr2R 4871289 intergenic not near genes chr2R_5_4870001 chr2R_4870001 RAL-409_125b 710 chr2R 4908883 4908925 chr2R 4909013 4909056 14 130 8.0 9.0 8.5 1.5 173 chr2R 4908883 intergenic not near genes chr2R 4908970 intergenic not near genes chr2R 4909056 intergenic not near genes chr2R_14_4905001 chr2R_4905001 RAL-409_125b 711 chr2R 4916052 4916093 chr2R 4916180 4916227 6 129 4.5 1.0 2.8 1.6 175 chr2R 4916052 intergenic not near genes chr2R 4916140 intergenic not near genes chr2R 4916227 intergenic not near genes chr2R_6_4915001 chr2R_4915001 RAL-409_125b 712 chr2R 4938468 4938527 chr2R 4938654 4938683 8 172 9.0 12.5 10.8 0.7 215 chr2R 4938468 intron Ir41a + chr2R 4938576 intron Ir41a + chr2R 4938683 intron Ir41a + chr2R_8_4935001 chr2R_4935001 RAL-409_125b 713 chr2R 5125221 5125271 chr2R 5125589 5125629 10 362 4.5 8.0 6.2 1.4 408 chr2R 5125221 intron gus - chr2R 5125425 intron gus - chr2R 5125629 intron gus - chr2R_10_5125001 chr2R_5125001 RAL-409_125b 714 chr2R 5188657 5188731 chr2R 5189400 5189469 gypsy8 20 736 6.5 5.5 6.0 2.9 812 chr2R 5188657 intron Nipped-A - chr2R 5189063 intron Nipped-A - chr2R 5189469 intron Nipped-A - chr2R_20_5185001 chr2R_5185001 RAL-409_125b 715 chr2R 5237299 5237345 chr2R 5237431 5237472 10 130 5.5 0.0 2.8 2.6 173 chr2R 5237299 intron Nipped-A - chr2R 5237386 intron Nipped-A - chr2R 5237472 intron Nipped-A - chr2R_10_5235001 chr2R_5235001 RAL-409_125b 716 chr2R 5267550 5267628 chr2R 5267687 5267715 20 126 6.0 8.0 7.0 2.5 165 chr2R 5267550 intron d4 + chr2R 5267632 intron d4 + chr2R 5267715 intron d4 + chr2R_20_5265001 chr2R_5265001 RAL-409_125b 717 chr2R 5417952 5418016 chr2R 5420634 5420698 Burdock 26 2679 6.5 6.0 6.2 3.6 2746 chr2R 5417952 intron laccase2 + chr2R 5419325 intron laccase2 + chr2R 5420698 intron laccase2 + chr2R_26_5415001 chr2R_5415001 RAL-409_125b 718 chr2R 5472323 5472393 chr2R 5472464 5472537 10 136 0.0 6.0 3.0 2.5 214 chr2R 5472323 intron CG30440 - chr2R 5472430 intron CG30440 - chr2R 5472537 intron CG30440 - chr2R_10_5470001 chr2R_5470001 RAL-409_125b 719 chr2R 5475554 5475617 chr2R 5475698 5475756 12 143 1.0 7.0 4.0 2.4 202 chr2R 5475554 intron CG30440 - chr2R 5475655 intron CG30440 - chr2R 5475756 intron CG30440 - chr2R_12_5475001 chr2R_5475001 RAL-409_125b 720 chr2R 5476305 5476355 chr2R 5476899 5476949 12 588 7.5 9.0 8.2 1.3 644 chr2R 5476305 intron CG30440 - chr2R 5476627 intron CG30440 - chr2R 5476949 intron CG30440 - chr2R_12_5475001 chr2R_5475001 RAL-409_125b 721 chr2R 5491625 5491683 chr2R 5491759 5491825 21 135 10.0 9.5 9.8 1.9 200 chr2R 5491625 intron CG30440 - chr2R 5491725 intron CG30440 - chr2R 5491825 intron CG30440 - chr2R_21_5490001 chr2R_5490001 RAL-409_125b 722 chr2R 5543205 5543215 chr2R 5547327 5547349 invader1 7 4131 0.0 10.0 5.0 1.2 4144 chr2R 5543205 intron CG30438 + chr2R 5545277 intron CG30438 + chr2R 5547349 intron CG30438 + chr2R_7_5545001 chr2R_5545001 RAL-409_125b 723 chr2R 5581402 5581413 chr2R 5627655 5627669 5 46257 7.0 12.5 9.8 0.5 46267 chr2R 5581402 intergenic not near genes chr2R 5604536 intron Fis1 - chr2R 5627669 intergenic not near genes chr2R_5_5600001 chr2R_5600001 RAL-409_125b 724 chr2R 5701729 5701777 chr2R 5701853 5701900 18 120 10.0 12.5 11.2 1.5 171 chr2R 5701729 intergenic vlc + chr2R 5701814 intergenic vlc + chr2R 5701900 intergenic vlc + chr2R_18_5700001 chr2R_5700001 RAL-409_125b 725 chr2R 5710618 5710680 chr2R 5710745 5710802 15 119 3.5 11.5 7.5 1.8 184 chr2R 5710618 intron ap - chr2R 5710710 intron ap - chr2R 5710802 intron ap - chr2R_15_5710001 chr2R_5710001 RAL-409_125b 726 chr2R 5750411 5750451 chr2R 5750553 5750593 12 138 5.0 5.0 5.0 2.0 182 chr2R 5750411 intergenic not near genes chr2R 5750502 intergenic not near genes chr2R 5750593 intergenic not near genes chr2R_12_5750001 chr2R_5750001 RAL-409_125b 727 chr2R 5774259 5774303 chr2R 5774563 5774607 8 300 5.0 5.0 5.0 1.3 348 chr2R 5774259 3` UTR Gp210 + chr2R 5774433 intergenic Gp210 +,ZnT41F - chr2R 5774607 intergenic ZnT41F -,Gp210 + chr2R_8_5770001 chr2R_5770001 RAL-409_125b 728 chr2R 5790427 5790481 chr2R 5790556 5790611 9 132 1.5 3.0 2.2 2.8 184 chr2R 5790427 intergenic not near genes chr2R 5790519 intergenic not near genes chr2R 5790611 intergenic not near genes chr2R_9_5790001 chr2R_5790001 RAL-409_125b 729 chr2R 5794187 5794257 chr2R 5794365 5794434 24 173 5.5 5.5 5.5 3.7 247 chr2R 5794187 intergenic not near genes chr2R 5794310 intergenic not near genes chr2R 5794434 intergenic not near genes chr2R_24_5790001 chr2R_5790001 RAL-409_125b 730 chr2R 5859937 5860007 chr2R 5860097 5860132 10 149 5.0 7.0 6.0 1.4 195 chr2R 5859937 3` UTR dpr12 + chr2R 5860034 3` UTR dpr12 + chr2R 5860132 3` UTR dpr12 + chr2R_10_5860001 chr2R_5860001 RAL-409_125b 731 chr2R 5868042 5868090 chr2R 5868187 5868244 9 152 1.5 7.0 4.2 1.7 202 chr2R 5868042 intergenic not near genes chr2R 5868143 intergenic not near genes chr2R 5868244 intergenic not near genes chr2R_9_5865001 chr2R_5865001 RAL-409_125b 732 chr2R 5869237 5869299 chr2R 5874363 5874425 flea 19 5124 3.0 5.5 4.2 3.7 5188 chr2R 5869237 intergenic not near genes chr2R 5871831 intergenic not near genes chr2R 5874425 intergenic not near genes chr2R_19_5870001 chr2R_5870001 RAL-409_125b 733 chr2R 5878873 5878950 chr2R 5879003 5879080 25 126 6.5 7.5 7.0 3.1 207 chr2R 5878873 intergenic CG44438 - chr2R 5878976 intergenic CG44438 - chr2R 5879080 intergenic CG44438 - chr2R_25_5875001 chr2R_5875001 RAL-409_125b 734 chr2R 5885188 5885377 chr2R 5885321 5885556 19 156 0.0 1.0 0.5 12.7 368 chr2R 5885188 5` UTR CR44125 + chr2R 5885372 5` UTR CR44125 + chr2R 5885556 5` UTR CR44125 + chr2R_19_5885001 chr2R_5885001 RAL-409_125b 735 chr2R 5902115 5902171 chr2R 5909724 5909774 17.6 9 7604 6.0 5.0 5.5 1.4 7659 chr2R 5902115 5` UTR CG43366 + chr2R 5905944 intron CG43366 + chr2R 5909774 intron CG43366 + chr2R_9_5905001 chr2R_5905001 RAL-409_125b 736 chr2R 5947026 5947077 chr2R 5947197 5947248 15 169 6.5 11.0 8.8 1.5 222 chr2R 5947026 intergenic not near genes chr2R 5947137 intergenic not near genes chr2R 5947248 intergenic not near genes chr2R_15_5945001 chr2R_5945001 RAL-409_125b 737 chr2R 5984736 5984794 chr2R 5984871 5984922 8 132 6.5 9.5 8.0 0.9 186 chr2R 5984736 intron Src42A + chr2R 5984829 intron Src42A + chr2R 5984922 intron Src42A + chr2R_8_5980001 chr2R_5980001 RAL-409_125b 738 chr2R 6065771 6065778 chr2R 6065883 6065928 4 135 5.5 6.5 6.0 0.6 157 chr2R 6065771 intron CCHa2-R + chr2R 6065850 intron CCHa2-R + chr2R 6065928 exon CCHa2-R + chr2R_4_6065001 chr2R_6065001 RAL-409_125b 739 chr2R 6088322 6088375 chr2R 6088465 6088518 15 142 10.0 9.0 9.5 1.4 196 chr2R 6088322 intergenic not near genes chr2R 6088420 intergenic not near genes chr2R 6088518 intergenic not near genes chr2R_15_6085001 chr2R_6085001 RAL-409_125b 740 chr2R 6096699 6096750 chr2R 6101919 6101946 BS 10 5227 5.5 9.5 7.5 1.2 5247 chr2R 6096699 intron EcR - chr2R 6099322 intron EcR - chr2R 6101946 intron EcR - chr2R_10_6095001 chr2R_6095001 RAL-409_125b 741 chr2R 6135545 6135606 chr2R 6135684 6135744 22 141 4.0 4.0 4.0 4.4 199 chr2R 6135545 intron EcR - chr2R 6135644 intron EcR - chr2R 6135744 intron EcR - chr2R_22_6135001 chr2R_6135001 RAL-409_125b 742 chr2R 6178074 6178140 chr2R 6178250 6178316 20 174 5.0 5.5 5.2 3.2 242 chr2R 6178074 intergenic not near genes chr2R 6178195 intergenic not near genes chr2R 6178316 intergenic not near genes chr2R_20_6175001 chr2R_6175001 RAL-409_125b 743 chr2R 6194647 6194694 chr2R 6194780 6194806 11 129 8.5 7.5 8.0 1.2 159 chr2R 6194647 intron Ptr - chr2R 6194726 intron Ptr - chr2R 6194806 intron Ptr - chr2R_11_6190001 chr2R_6190001 RAL-409_125b 744 chr2R 6211004 6211077 chr2R 6211277 6211350 16 269 6.5 8.0 7.2 2.0 346 chr2R 6211004 intron l(2)k14710 - chr2R 6211177 intron l(2)k14710 - chr2R 6211350 intron l(2)k14710 - chr2R_16_6210001 chr2R_6210001 RAL-409_125b 745 chr2R 6494519 6494538 chr2R 6499331 6499350 F-element 4 4812 8.0 2.0 5.0 0.7 4831 chr2R 6494519 intergenic not near genes chr2R 6496934 intergenic not near genes chr2R 6499350 intergenic not near genes chr2R_4_6495001 chr2R_6495001 RAL-409_125b 746 chr2R 6546687 6546745 chr2R 6546828 6546896 19 147 5.0 3.5 4.2 3.7 209 chr2R 6546687 intron jing + chr2R 6546792 intron jing + chr2R 6546896 intron jing + chr2R_19_6545001 chr2R_6545001 RAL-409_125b 747 chr2R 6579758 6579793 chr2R 6584894 6584930 flea 14 5134 5.0 3.0 4.0 2.8 5172 chr2R 6579758 intron jing + chr2R 6582344 intron jing + chr2R 6584930 intron jing + chr2R_14_6580001 chr2R_6580001 RAL-409_125b 748 chr2R 6612095 6612149 chr2R 6612225 6612279 12 127 7.5 7.0 7.2 1.5 184 chr2R 6612095 intron jing + chr2R 6612187 intron jing + chr2R 6612279 intron jing + chr2R_12_6610001 chr2R_6610001 RAL-409_125b 749 chr2R 6806761 6806816 chr2R 6806881 6806951 7 126 6.0 5.5 5.8 1.0 190 chr2R 6806761 intergenic not near genes chr2R 6806856 intergenic not near genes chr2R 6806951 intergenic not near genes chr2R_7_6805001 chr2R_6805001 RAL-409_125b 750 chr2R 6952138 6952180 chr2R 6959760 6959810 opus 10 7629 5.5 7.0 6.2 1.4 7672 chr2R 6952138 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R 6955974 intron,intron mim -,CheB42c - chr2R 6959810 intron,intron mim -,CheB42c - chr2R_10_6955001 chr2R_6955001 RAL-409_125b 751 chr2R 7102631 7102670 chr2R 7102760 7102819 12 147 2.0 6.5 4.2 2.3 188 chr2R 7102631 intron esn + chr2R 7102725 intron esn + chr2R 7102819 intron esn + chr2R_12_7100001 chr2R_7100001 RAL-409_125b 752 chr2R 7120057 7120114 chr2R 7120250 7120307 11 192 6.0 4.5 5.2 1.8 250 chr2R 7120057 intron esn + chr2R 7120182 intron esn + chr2R 7120307 intron esn + chr2R_11_7120001 chr2R_7120001 RAL-409_125b 753 chr2R 7153120 7153171 chr2R 7153246 7153307 15 128 7.0 6.5 6.8 1.9 187 chr2R 7153120 intron,exon pk +,Spn43Ab - chr2R 7153214 intron,intron pk +,Spn43Ab - chr2R 7153307 intron,intron pk +,Spn43Ab - chr2R_15_7150001 chr2R_7150001 RAL-409_125b 754 chr2R 7196532 7196584 chr2R 7201357 7201409 F-element 11 4824 8.5 6.5 7.5 1.3 4877 chr2R 7196532 intron pk + chr2R 7198970 intron pk + chr2R 7201409 intron pk + chr2R_11_7195001 chr2R_7195001 RAL-409_125b 755 chr2R 7209845 7209861 chr2R 7217629 7217672 roo 5 7796 1.0 4.5 2.8 1.3 7827 chr2R 7209845 intron pk + chr2R 7213758 intron pk + chr2R 7217672 intron pk + chr2R_5_7210001 chr2R_7210001 RAL-409_125b 756 chr2R 7235776 7235843 chr2R 7240918 7240970 jockey 7 5134 7.0 3.0 5.0 1.2 5194 chr2R 7235776 intergenic not near genes chr2R 7238373 intergenic not near genes chr2R 7240970 intergenic not near genes chr2R_7_7235001 chr2R_7235001 RAL-409_125b 757 chr2R 7417854 7418152 chr2R 7417990 7418281 20 129 6.5 5.5 6.0 2.9 427 chr2R 7417854 intergenic not near genes chr2R 7418068 intergenic not near genes chr2R 7418281 intergenic not near genes chr2R_20_7415001 chr2R_7415001 RAL-409_125b 758 chr2R 7434851 7434907 chr2R 7439202 7439246 Juan 10 4349 8.5 4.0 6.2 1.4 4395 chr2R 7434851 3` UTR so + chr2R 7437048 intergenic not near genes chr2R 7439246 intergenic not near genes chr2R_10_7435001 chr2R_7435001 RAL-409_125b 759 chr2R 7459236 7459259 chr2R 7459374 7459385 5 133 16.0 4.0 10.0 0.5 149 chr2R 7459236 intergenic Inos -,CG11141 - chr2R 7459310 intergenic CG11141 -,Inos - chr2R 7459385 intergenic CG11141 - chr2R_5_7455001 chr2R_7455001 RAL-409_125b 760 chr2R 7608373 7608424 chr2R 7613616 7613675 I-element 7 5247 8.0 0.0 4.0 1.4 5302 chr2R 7608373 intron CG1358 - chr2R 7611024 intron CG1358 - chr2R 7613675 intron CG1358 - chr2R_7_7610001 chr2R_7610001 RAL-409_125b 761 chr2R 7615352 7615391 chr2R 7615486 7615518 9 131 3.5 3.0 3.2 2.1 166 chr2R 7615352 intron CG1358 - chr2R 7615435 intron CG1358 - chr2R 7615518 intron CG1358 - chr2R_9_7615001 chr2R_7615001 RAL-409_125b 762 chr2R 7714045 7714117 chr2R 7714171 7714250 12 130 6.0 3.0 4.5 2.2 205 chr2R 7714045 exon CG1942 + chr2R 7714148 3` UTR CG1942 + chr2R 7714250 intergenic CG1942 + chr2R_12_7710001 chr2R_7710001 RAL-409_125b 763 chr2R 7737872 7737903 chr2R 7737996 7738030 9 128 10.5 9.5 10.0 0.8 158 chr2R 7737872 intergenic not near genes chr2R 7737951 intergenic not near genes chr2R 7738030 intergenic not near genes chr2R_9_7735001 chr2R_7735001 RAL-409_125b 764 chr2R 7815648 7815679 chr2R 7822151 7822198 Burdock 7 6514 6.5 6.0 6.2 1.0 6550 chr2R 7815648 intergenic CG1882 + chr2R 7818923 intergenic not near genes chr2R 7822198 3` UTR cathD - chr2R_7_7815001 chr2R_7815001 RAL-409_125b 765 chr2R 7856936 7857007 chr2R 7857350 7857383 12 399 4.5 4.5 4.5 2.2 447 chr2R 7856936 intron Dgk - chr2R 7857160 intron Dgk - chr2R 7857383 intron Dgk - chr2R_12_7855001 chr2R_7855001 RAL-409_125b 766 chr2R 7869148 7869202 chr2R 7873984 7874038 Doc 20 4832 8.0 5.0 6.5 2.7 4890 chr2R 7869148 intron Dgk - chr2R 7871593 intron Dgk - chr2R 7874038 intron Dgk - chr2R_20_7870001 chr2R_7870001 RAL-409_125b 767 chr2R 7897137 7897148 chr2R 7897245 7897287 4 129 0.5 12.5 6.5 0.5 150 chr2R 7897137 intron CG30377 + chr2R 7897212 intron CG30377 + chr2R 7897287 intron CG30377 + chr2R_4_7895001 chr2R_7895001 RAL-409_125b 768 chr2R 7915681 7915738 chr2R 7915823 7915880 5 140 21.0 22.5 21.8 0.2 199 chr2R 7915681 intron CG12159 - chr2R 7915780 intron CG12159 - chr2R 7915880 intron CG12159 - chr2R_5_7915001 chr2R_7915001 RAL-409_125b 769 chr2R 7916399 7916450 chr2R 7916514 7916585 13 124 5.0 4.5 4.8 2.2 186 chr2R 7916399 5` UTR CG12159 - chr2R 7916492 intergenic CG12159 -,Cul1 + chr2R 7916585 intergenic CG12159 -,Cul1 + chr2R_13_7915001 chr2R_7915001 RAL-409_125b 770 chr2R 7942888 7942949 chr2R 7943195 7943226 11 301 5.5 4.0 4.8 1.9 338 chr2R 7942888 exon CG14764 - chr2R 7943057 intron CG14764 - chr2R 7943226 intron CG14764 - chr2R_11_7940001 chr2R_7940001 RAL-409_125b 771 chr2R 8015624 8015675 chr2R 8017690 8017738 16 2060 4.5 5.5 5.0 2.7 2114 chr2R 8015624 intergenic mir-4981 + chr2R 8016681 intergenic not near genes chr2R 8017738 intergenic not near genes chr2R_16_8015001 chr2R_8015001 RAL-409_125b 772 chr2R 8026762 8026837 chr2R 8026888 8026963 10 126 4.5 3.5 4.0 2.0 201 chr2R 8026762 intergenic CR45267 + chr2R 8026862 intergenic CR45267 + chr2R 8026963 intergenic CR45267 + chr2R_10_8025001 chr2R_8025001 RAL-409_125b 773 chr2R 8049553 8049598 chr2R 8049732 8049780 7 179 6.0 6.5 6.2 1.0 227 chr2R 8049553 intergenic not near genes chr2R 8049666 intergenic not near genes chr2R 8049780 intergenic not near genes chr2R_7_8045001 chr2R_8045001 RAL-409_125b 774 chr2R 8067026 8067081 chr2R 8067160 8067215 13 132 6.5 5.5 6.0 1.9 189 chr2R 8067026 intron CG17977 - chr2R 8067120 intron CG17977 - chr2R 8067215 exon CG17977 - chr2R_13_8065001 chr2R_8065001 RAL-409_125b 775 chr2R 8076635 8076707 chr2R 8076765 8076837 17 128 5.5 4.5 5.0 2.8 202 chr2R 8076635 intron lig + chr2R 8076736 intron lig + chr2R 8076837 intron lig + chr2R_17_8075001 chr2R_8075001 RAL-409_125b 776 chr2R 8089216 8089270 chr2R 8089352 8089406 8 136 6.5 4.0 5.2 1.3 190 chr2R 8089216 3` UTR sut2 + chr2R 8089311 intergenic sut2 +,sut3 + chr2R 8089406 intergenic sut3 +,sut2 + chr2R_8_8085001 chr2R_8085001 RAL-409_125b 777 chr2R 8113989 8114052 chr2R 8114117 8114191 9 136 0.0 4.0 2.0 3.0 202 chr2R 8113989 intergenic Asap - chr2R 8114090 intergenic Asap - chr2R 8114191 intergenic Asap - chr2R_9_8110001 chr2R_8110001 RAL-409_125b 778 chr2R 8157877 8157906 chr2R 8157990 8158034 13 127 5.5 10.5 8.0 1.4 157 chr2R 8157877 5` UTR CR44068 + chr2R 8157956 5` UTR CR44068 + chr2R 8158034 5` UTR CR44068 + chr2R_13_8155001 chr2R_8155001 RAL-409_125b 779 chr2R 8249529 8249814 chr2R 8249651 8249937 16 130 8.0 3.0 5.5 2.5 408 chr2R 8249529 5` UTR CG44439 - chr2R 8249733 intergenic CG44439 - chr2R 8249937 intergenic CG44439 - chr2R_16_8245001 chr2R_8245001 RAL-409_125b 780 chr2R 8266525 8266565 chr2R 8266663 8266691 7 145 5.5 2.0 3.8 1.5 166 chr2R 8266525 intron CG30375 - chr2R 8266608 exon CG30375 - chr2R 8266691 exon CG30375 - chr2R_7_8265001 chr2R_8265001 RAL-409_125b 781 chr2R 8277608 8277658 chr2R 8277735 8277803 9 131 6.5 6.0 6.2 1.2 195 chr2R 8277608 5` UTR CR44280 + chr2R 8277706 5` UTR CR44280 + chr2R 8277803 5` UTR CR44280 + chr2R_9_8275001 chr2R_8275001 RAL-409_125b 782 chr2R 8314515 8314522 chr2R 8314662 8314669 4 146 2.0 5.5 3.8 0.8 154 chr2R 8314515 intergenic not near genes chr2R 8314592 intergenic not near genes chr2R 8314669 intergenic not near genes chr2R_4_8310001 chr2R_8310001 RAL-409_125b 783 chr2R 8330844 8330886 chr2R 8331348 8331422 roo 7 527 5.0 2.5 3.8 1.5 578 chr2R 8330844 intron pdm3 + chr2R 8331133 intron pdm3 + chr2R 8331422 intron pdm3 + chr2R_7_8330001 chr2R_8330001 RAL-409_125b 784 chr2R 8355198 8355273 chr2R 8355332 8355407 12 134 7.5 8.0 7.8 1.4 209 chr2R 8355198 intron pdm3 + chr2R 8355302 intron pdm3 + chr2R 8355407 intron pdm3 + chr2R_12_8355001 chr2R_8355001 RAL-409_125b 785 chr2R 8387397 8387453 chr2R 8387514 8387574 16 121 4.5 8.0 6.2 2.2 177 chr2R 8387397 intron pdm3 + chr2R 8387486 intron pdm3 + chr2R 8387574 intron pdm3 + chr2R_16_8385001 chr2R_8385001 RAL-409_125b 786 chr2R 8398204 8398217 chr2R 8403000 8403038 Doc 10 4821 4.5 3.5 4.0 2.0 4834 chr2R 8398204 intron CG2121 - chr2R 8400621 intron CG2121 - chr2R 8403038 intron CG2121 - chr2R_10_8400001 chr2R_8400001 RAL-409_125b 787 chr2R 8454944 8454994 chr2R 8455837 8455907 12 899 32.5 40.0 36.2 0.3 963 chr2R 8454944 exon Mal-A2 + chr2R 8455426 exon Mal-A2 + chr2R 8455907 intergenic Mal-A3 -,Mal-A2 + chr2R_12_8455001 chr2R_8455001 RAL-409_125b 788 chr2R 8480912 8480949 chr2R 8481086 8481114 8 173 13.5 11.0 12.2 0.6 202 chr2R 8480912 intron mtt - chr2R 8481013 intron mtt - chr2R 8481114 intron mtt - chr2R_8_8480001 chr2R_8480001 RAL-409_125b 789 chr2R 8483926 8483988 chr2R 8484042 8484099 21 122 7.5 8.5 8.0 2.3 173 chr2R 8483926 intron mtt - chr2R 8484012 intron mtt - chr2R 8484099 intron mtt - chr2R_21_8480001 chr2R_8480001 RAL-409_125b 790 chr2R 8508734 8508792 chr2R 8508850 8508889 9 116 3.0 5.0 4.0 1.8 155 chr2R 8508734 intron mtt - chr2R 8508812 intron mtt - chr2R 8508889 intron mtt - chr2R_9_8505001 chr2R_8505001 RAL-409_125b 791 chr2R 8512746 8512819 chr2R 8512877 8512945 11 125 5.0 9.0 7.0 1.4 199 chr2R 8512746 intron mtt - chr2R 8512846 intron mtt - chr2R 8512945 intron mtt - chr2R_11_8510001 chr2R_8510001 RAL-409_125b 792 chr2R 8714706 8714712 chr2R 8714824 8714847 6 133 1.0 8.0 4.5 1.1 141 chr2R 8714706 3` UTR PGRP-SC1b + chr2R 8714776 3` UTR PGRP-SC1b + chr2R 8714847 3` UTR PGRP-SC1b + chr2R_6_8710001 chr2R_8710001 RAL-409_125b 793 chr2R 8722731 8722788 chr2R 8723015 8723069 pogo 12 278 6.5 5.0 5.8 1.8 338 chr2R 8722731 intron CG14767 - chr2R 8722900 intron CG14767 - chr2R 8723069 intron CG14767 - chr2R_12_8720001 chr2R_8720001 RAL-409_125b 794 chr2R 8760585 8760627 chr2R 8761283 8761353 10 712 6.5 5.0 5.8 1.5 768 chr2R 8760585 intergenic not near genes chr2R 8760969 intergenic not near genes chr2R 8761353 intergenic not near genes chr2R_10_8760001 chr2R_8760001 RAL-409_125b 795 chr2R 8777878 8777941 chr2R 8784119 8784195 diver 11 6250 2.5 5.0 3.8 2.3 6317 chr2R 8777878 intergenic not near genes chr2R 8781036 intergenic not near genes chr2R 8784195 intergenic not near genes chr2R_11_8780001 chr2R_8780001 RAL-409_125b 796 chr2R 9047371 9047436 chr2R 9047516 9047581 14 143 2.0 3.5 2.8 3.7 210 chr2R 9047371 intron CG13743 - chr2R 9047476 intron CG13743 - chr2R 9047581 intron CG13743 - chr2R_14_9045001 chr2R_9045001 RAL-409_125b 797 chr2R 9052660 9052733 chr2R 9052789 9052864 8 120 5.0 7.0 6.0 1.1 204 chr2R 9052660 intron CG13743 - chr2R 9052762 intron CG13743 - chr2R 9052864 intron CG13743 - chr2R_8_9050001 chr2R_9050001 RAL-409_125b 798 chr2R 9075859 9075922 chr2R 9076044 9076092 10 182 7.5 3.5 5.5 1.5 233 chr2R 9075859 intron ana + chr2R 9075976 intron ana + chr2R 9076092 intron ana + chr2R_10_9075001 chr2R_9075001 RAL-409_125b 799 chr2R 9151264 9151305 chr2R 9157776 9157823 Burdock 8 6516 7.0 9.0 8.0 0.9 6559 chr2R 9151264 exon CG30345 + chr2R 9154544 intergenic not near genes chr2R 9157823 intergenic CG8008 - chr2R_8_9150001 chr2R_9150001 RAL-409_125b 800 chr2R 9190276 9190352 chr2R 9190681 9190756 22 399 7.5 6.5 7.0 2.8 480 chr2R 9190276 intron,intron CG45085 -,CG8026 - chr2R 9190516 intron,intron CG45085 -,CG8026 - chr2R 9190756 intron,intron CG45085 -,CG8026 - chr2R_22_9190001 chr2R_9190001 RAL-409_125b 801 chr2R 9212666 9212689 chr2R 9213184 9213217 roo 4 521 10.5 5.5 8.0 0.4 551 chr2R 9212666 intergenic CR45309 + chr2R 9212942 intergenic CR45309 + chr2R 9213217 5` UTR CR45309 + chr2R_4_9210001 chr2R_9210001 RAL-409_125b 802 chr2R 9213573 9213647 chr2R 9213708 9213771 14 132 3.0 6.5 4.8 2.4 198 chr2R 9213573 5` UTR CR45309 + chr2R 9213672 5` UTR CR45309 + chr2R 9213771 intergenic CR45309 +,CR44451 + chr2R_14_9210001 chr2R_9210001 RAL-409_125b 803 chr2R 9272921 9272995 chr2R 9273095 9273148 4 171 1.5 4.0 2.8 1.1 227 chr2R 9272921 intron Pkn - chr2R 9273034 intron Pkn - chr2R 9273148 intron Pkn - chr2R_4_9270001 chr2R_9270001 RAL-409_125b 804 chr2R 9368102 9368132 chr2R 9368213 9368228 5 108 8.0 0.0 4.0 1.0 126 chr2R 9368102 intron CG13954 - chr2R 9368165 intron CG13954 - chr2R 9368228 intron CG13954 - chr2R_5_9365001 chr2R_9365001 RAL-409_125b 805 chr2R 9378081 9378132 chr2R 9378194 9378252 15 127 5.0 4.0 4.5 2.7 171 chr2R 9378081 intron CG13954 - chr2R 9378166 intron CG13954 - chr2R 9378252 intron CG13954 - chr2R_15_9375001 chr2R_9375001 RAL-409_125b 806 chr2R 9389951 9389970 chr2R 9390115 9390144 9 170 13.0 7.0 10.0 0.8 193 chr2R 9389951 intergenic l(2)03659 +,CG13954 - chr2R 9390048 intergenic l(2)03659 + chr2R 9390144 intergenic l(2)03659 + chr2R_9_9390001 chr2R_9390001 RAL-409_125b 807 chr2R 9391013 9391087 chr2R 9391624 9391698 21 608 3.0 6.0 4.5 3.8 685 chr2R 9391013 exon l(2)03659 + chr2R 9391356 exon l(2)03659 + chr2R 9391698 intron l(2)03659 + chr2R_21_9390001 chr2R_9390001 RAL-409_125b 808 chr2R 9406089 9406117 chr2R 9406359 9406386 4 272 17.5 20.5 19.0 0.2 297 chr2R 9406089 intron wun - chr2R 9406238 intron wun - chr2R 9406386 intron wun - chr2R_4_9405001 chr2R_9405001 RAL-409_125b 809 chr2R 9407502 9407574 chr2R 9408281 9408348 20 777 5.5 6.5 6.0 2.9 846 chr2R 9407502 intron wun - chr2R 9407925 intron wun - chr2R 9408348 intron wun - chr2R_20_9405001 chr2R_9405001 RAL-409_125b 810 chr2R 9455750 9455770 chr2R 9455919 9455935 4 164 15.5 6.5 11.0 0.3 185 chr2R 9455750 intron Camta + chr2R 9455842 intron Camta + chr2R 9455935 intron Camta + chr2R_4_9455001 chr2R_9455001 RAL-409_125b 811 chr2R 9455774 9455819 chr2R 9455918 9455987 16 157 8.5 6.0 7.2 2.0 213 chr2R 9455774 intron Camta + chr2R 9455880 intron Camta + chr2R 9455987 intron Camta + chr2R_16_9455001 chr2R_9455001 RAL-409_125b 812 chr2R 9466637 9466680 chr2R 9466758 9466803 7 118 4.5 5.0 4.8 1.2 166 chr2R 9466637 intron Camta + chr2R 9466720 intron Camta + chr2R 9466803 intron Camta + chr2R_7_9465001 chr2R_9465001 RAL-409_125b 813 chr2R 9510615 9510696 chr2R 9510781 9510857 14 162 3.0 3.0 3.0 3.5 242 chr2R 9510615 exon brp + chr2R 9510736 intron brp + chr2R 9510857 exon brp + chr2R_14_9510001 chr2R_9510001 RAL-409_125b 814 chr2R 9548567 9548601 chr2R 9548801 9548868 12 263 5.5 6.5 6.0 1.7 301 chr2R 9548567 intergenic not near genes chr2R 9548718 intergenic not near genes chr2R 9548868 intergenic not near genes chr2R_12_9545001 chr2R_9545001 RAL-409_125b 815 chr2R 9651001 9651056 chr2R 9651119 9651177 9 127 3.5 4.0 3.8 1.9 176 chr2R 9651001 intron Mmp2 - chr2R 9651089 intron Mmp2 - chr2R 9651177 intron Mmp2 - chr2R_9_9650001 chr2R_9650001 RAL-409_125b 816 chr2R 9682411 9682484 chr2R 9682542 9682605 5 128 27.0 27.0 27.0 0.2 194 chr2R 9682411 intron Mmp2 - chr2R 9682508 intron Mmp2 - chr2R 9682605 intron Mmp2 - chr2R_5_9680001 chr2R_9680001 RAL-409_125b 817 chr2R 9726573 9726636 chr2R 9734174 9734237 17.6 10 7601 6.5 4.0 5.2 1.6 7664 chr2R 9726573 intron sqa - chr2R 9730405 intron sqa - chr2R 9734237 intron sqa - chr2R_10_9730001 chr2R_9730001 RAL-409_125b 818 chr2R 9794507 9794576 chr2R 9794637 9794656 18 128 4.0 5.5 4.8 3.1 149 chr2R 9794507 intron,intron CG1688 -,CG1698 + chr2R 9794582 intron,intron CG1688 -,CG1698 + chr2R 9794656 intron,intron CG1688 -,CG1698 + chr2R_18_9790001 chr2R_9790001 RAL-409_125b 819 chr2R 9871023 9871067 chr2R 9871552 9871603 roo 15 530 0.0 8.5 4.2 2.9 580 chr2R 9871023 intron cbx - chr2R 9871313 intron cbx - chr2R 9871603 intron,5` UTR cbx -,CG18446 + chr2R_15_9870001 chr2R_9870001 RAL-409_125b 820 chr2R 9921156 9921167 chr2R 9921336 9921347 4 180 2.0 7.5 4.8 0.7 191 chr2R 9921156 intron Mef2 - chr2R 9921252 intron Mef2 - chr2R 9921347 intron Mef2 - chr2R_4_9920001 chr2R_9920001 RAL-409_125b 821 chr2R 9945405 9945453 chr2R 9945641 9945693 BS 5 232 6.5 6.5 6.5 0.7 288 chr2R 9945405 intron Mef2 - chr2R 9945549 intron Mef2 - chr2R 9945693 intron Mef2 - chr2R_5_9945001 chr2R_9945001 RAL-409_125b 822 chr2R 9969875 9969944 chr2R 9973616 9973685 18 3747 29.5 38.0 33.8 0.5 3810 chr2R 9969875 intron Adam + chr2R 9971780 exon CG12134 + chr2R 9973685 intergenic not near genes chr2R_18_9970001 chr2R_9970001 RAL-409_125b 823 chr2R 9998070 9998086 chr2R 9998214 9998230 6 144 3.5 10.0 6.8 0.8 160 chr2R 9998070 intron Pka-R2 - chr2R 9998150 intron Pka-R2 - chr2R 9998230 intron Pka-R2 - chr2R_6_9995001 chr2R_9995001 RAL-409_125b 824 chr2R 10005508 10005579 chr2R 10005655 10005726 14 146 8.0 4.5 6.2 1.9 218 chr2R 10005508 intron Pka-R2 - chr2R 10005617 intron Pka-R2 - chr2R 10005726 intron Pka-R2 - chr2R_14_10005001 chr2R_10005001 RAL-409_125b 825 chr2R 10005814 10005865 chr2R 10007018 10007057 1360 14 1203 5.5 3.5 4.5 2.5 1243 chr2R 10005814 intron Pka-R2 - chr2R 10006436 intron Pka-R2 - chr2R 10007057 intron Pka-R2 - chr2R_14_10005001 chr2R_10005001 RAL-409_125b 826 chr2R 10008560 10008600 chr2R 10008689 10008738 8 133 0.5 0.0 0.2 6.7 178 chr2R 10008560 intron Pka-R2 - chr2R 10008649 intron Pka-R2 - chr2R 10008738 intron Pka-R2 - chr2R_8_10005001 chr2R_10005001 RAL-409_125b 827 chr2R 10046844 10046885 chr2R 10048074 10048122 8 1235 4.5 10.5 7.5 0.9 1278 chr2R 10046844 intron oys - chr2R 10047483 intron oys - chr2R 10048122 intron oys - chr2R_8_10045001 chr2R_10045001 RAL-409_125b 828 chr2R 10053477 10053480 chr2R 10053630 10053633 4 153 20.0 7.0 13.5 0.3 156 chr2R 10053477 intron magu + chr2R 10053555 intron magu + chr2R 10053633 intron magu + chr2R_4_10050001 chr2R_10050001 RAL-409_125b 829 chr2R 10053481 10053547 chr2R 10053626 10053700 14 152 6.5 6.0 6.2 1.9 219 chr2R 10053481 intron magu + chr2R 10053590 intron magu + chr2R 10053700 intron magu + chr2R_14_10050001 chr2R_10050001 RAL-409_125b 830 chr2R 10122692 10122751 chr2R 10122952 10123011 15 259 9.0 9.0 9.0 1.5 319 chr2R 10122692 intergenic Ccs - chr2R 10122852 intergenic Ccs - chr2R 10123011 intergenic Ccs - chr2R_15_10120001 chr2R_10120001 RAL-409_125b 831 chr2R 10162573 10162624 chr2R 10162703 10162743 11 128 9.0 10.0 9.5 1.0 170 chr2R 10162573 intron KCNQ - chr2R 10162658 intron KCNQ - chr2R 10162743 intron KCNQ - chr2R_11_10160001 chr2R_10160001 RAL-409_125b 832 chr2R 10168323 10168362 chr2R 10168439 10168489 5 123 6.0 10.0 8.0 0.6 166 chr2R 10168323 intron KCNQ - chr2R 10168406 intron KCNQ - chr2R 10168489 intron KCNQ - chr2R_5_10165001 chr2R_10165001 RAL-409_125b 833 chr2R 10171073 10171136 chr2R 10171207 10171265 13 133 1.5 11.5 6.5 1.7 192 chr2R 10171073 intron KCNQ - chr2R 10171169 intron KCNQ - chr2R 10171265 intron KCNQ - chr2R_13_10170001 chr2R_10170001 RAL-409_125b 834 chr2R 10172589 10172665 chr2R 10172751 10172833 14 157 5.5 4.5 5.0 2.3 244 chr2R 10172589 intron KCNQ - chr2R 10172711 intron KCNQ - chr2R 10172833 intron KCNQ - chr2R_14_10170001 chr2R_10170001 RAL-409_125b 835 chr2R 10176841 10176901 chr2R 10186058 10186121 roo 21 9219 2.5 2.5 2.5 6.0 9280 chr2R 10176841 intron KCNQ - chr2R 10181481 intron KCNQ - chr2R 10186121 intron KCNQ - chr2R_21_10180001 chr2R_10180001 RAL-409_125b 836 chr2R 10216141 10216214 chr2R 10216269 10216320 16 125 7.5 6.0 6.8 2.1 179 chr2R 10216141 intron,intron CG12912 -,Hr46 - chr2R 10216230 intron,intron CG12912 -,Hr46 - chr2R 10216320 intron,intron CG12912 -,Hr46 - chr2R_16_10215001 chr2R_10215001 RAL-409_125b 837 chr2R 10225656 10225681 chr2R 10225837 10225872 10 186 8.0 4.5 6.2 1.4 216 chr2R 10225656 intron,intron CG12912 -,Hr46 - chr2R 10225764 intron,intron CG12912 -,Hr46 - chr2R 10225872 intron,intron CG12912 -,Hr46 - chr2R_10_10225001 chr2R_10225001 RAL-409_125b 838 chr2R 10266495 10266524 chr2R 10266584 10266620 6 102 8.5 3.0 5.8 0.9 125 chr2R 10266495 intron CG12910 + chr2R 10266558 intron CG12910 + chr2R 10266620 intron CG12910 + chr2R_6_10265001 chr2R_10265001 RAL-409_125b 839 chr2R 10274786 10274803 chr2R 10274897 10274914 5 120 11.0 2.0 6.5 0.7 128 chr2R 10274786 intron CAP + chr2R 10274850 intron CAP + chr2R 10274914 intron CAP + chr2R_5_10270001 chr2R_10270001 RAL-409_125b 840 chr2R 10294930 10294999 chr2R 10295091 10295160 15 159 7.5 5.0 6.2 2.1 230 chr2R 10294930 exon CAP + chr2R 10295045 intron CAP + chr2R 10295160 intron CAP + chr2R_15_10295001 chr2R_10295001 RAL-409_125b 841 chr2R 10313296 10313339 chr2R 10313426 10313471 11 136 0.5 7.0 3.8 2.3 175 chr2R 10313296 intergenic not near genes chr2R 10313384 intergenic not near genes chr2R 10313471 intergenic Ndg + chr2R_11_10310001 chr2R_10310001 RAL-409_125b 842 chr2R 10322031 10322079 chr2R 10322163 10322206 12 131 1.5 6.5 4.0 2.4 175 chr2R 10322031 3` UTR Ndg + chr2R 10322118 intergenic Ndg + chr2R 10322206 intergenic Ndg + chr2R_12_10320001 chr2R_10320001 RAL-409_125b 843 chr2R 10352645 10352699 chr2R 10352767 10352821 10 123 8.0 6.0 7.0 1.2 176 chr2R 10352645 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352733 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352821 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_10_10350001 chr2R_10350001 RAL-409_125b 844 chr2R 10376207 10376256 chr2R 10376340 10376390 10 130 6.5 6.0 6.2 1.4 183 chr2R 10376207 intron CG42732 - chr2R 10376298 intron CG42732 - chr2R 10376390 intron CG42732 - chr2R_10_10375001 chr2R_10375001 RAL-409_125b 845 chr2R 10409012 10409078 chr2R 10409139 10409204 11 126 0.0 3.0 1.5 4.4 192 chr2R 10409012 intron CG42732 - chr2R 10409108 intron CG42732 - chr2R 10409204 intron,exon CG42732 -,CG33477 - chr2R_11_10405001 chr2R_10405001 RAL-409_125b 846 chr2R 10454055 10454104 chr2R 10454181 10454231 27 122 5.5 8.0 6.8 3.5 176 chr2R 10454055 intron,intron Galphao +,Cyp49a1 - chr2R 10454143 intron,intron Galphao +,Cyp49a1 - chr2R 10454231 intron,intron Galphao +,Cyp49a1 - chr2R_27_10450001 chr2R_10450001 RAL-409_125b 847 chr2R 10551007 10551178 chr2R 10551148 10551347 12 161 2.0 2.5 2.2 3.8 340 chr2R 10551007 intergenic not near genes chr2R 10551177 intergenic not near genes chr2R 10551347 intergenic not near genes chr2R_12_10550001 chr2R_10550001 RAL-409_125b 848 chr2R 10563202 10563248 chr2R 10563350 10563396 6 144 0.0 3.0 1.5 2.4 194 chr2R 10563202 intron psq + chr2R 10563299 intron psq + chr2R 10563396 intron psq + chr2R_6_10560001 chr2R_10560001 RAL-409_125b 849 chr2R 10571971 10572039 chr2R 10572213 10572271 12 233 7.0 6.0 6.5 1.6 300 chr2R 10571971 intron psq + chr2R 10572121 intron psq + chr2R 10572271 intron psq + chr2R_12_10570001 chr2R_10570001 RAL-409_125b 850 chr2R 10653175 10653228 chr2R 10653288 10653357 11 121 5.5 9.0 7.2 1.3 182 chr2R 10653175 intergenic not near genes chr2R 10653266 intergenic not near genes chr2R 10653357 intergenic not near genes chr2R_11_10650001 chr2R_10650001 RAL-409_125b 851 chr2R 10671268 10671276 chr2R 10671385 10671403 4 126 4.0 3.0 3.5 0.9 135 chr2R 10671268 intergenic not near genes chr2R 10671336 intergenic not near genes chr2R 10671403 intergenic not near genes chr2R_4_10670001 chr2R_10670001 RAL-409_125b 852 chr2R 10827285 10827362 chr2R 10827423 10827495 19 133 6.5 6.0 6.2 2.6 210 chr2R 10827285 exon CG12325 + chr2R 10827390 3` UTR CG12325 + chr2R 10827495 3` UTR,3` UTR CG12325 +,CG12344 - chr2R_19_10825001 chr2R_10825001 RAL-409_125b 853 chr2R 10848281 10848319 chr2R 10848432 10848437 9 147 4.5 9.5 7.0 1.1 156 chr2R 10848281 intron CG30015 - chr2R 10848359 intron CG30015 - chr2R 10848437 intron CG30015 - chr2R_9_10845001 chr2R_10845001 RAL-409_125b 854 chr2R 10871621 10871668 chr2R 10871737 10871802 19 124 4.0 5.0 4.5 3.5 181 chr2R 10871621 intron CG30015 - chr2R 10871712 intron CG30015 - chr2R 10871802 intron CG30015 - chr2R_19_10870001 chr2R_10870001 RAL-409_125b 855 chr2R 10930848 10930904 chr2R 10931294 10931351 16 438 8.5 6.0 7.2 2.0 503 chr2R 10930848 intergenic not near genes chr2R 10931100 intergenic not near genes chr2R 10931351 intergenic not near genes chr2R_16_10930001 chr2R_10930001 RAL-409_125b 856 chr2R 10937751 10937830 chr2R 10937945 10937994 9 181 0.0 8.0 4.0 1.8 243 chr2R 10937751 intergenic not near genes chr2R 10937872 intergenic not near genes chr2R 10937994 intergenic Spn47C - chr2R_9_10935001 chr2R_10935001 RAL-409_125b 857 chr2R 10976312 10976383 chr2R 10976445 10976516 16 130 3.5 2.0 2.8 4.2 204 chr2R 10976312 intergenic not near genes chr2R 10976414 intergenic not near genes chr2R 10976516 intergenic not near genes chr2R_16_10975001 chr2R_10975001 RAL-409_125b 858 chr2R 10977268 10977331 chr2R 10977404 10977455 12 131 12.0 14.5 13.2 0.8 187 chr2R 10977268 intergenic not near genes chr2R 10977362 intergenic not near genes chr2R 10977455 intergenic not near genes chr2R_12_10975001 chr2R_10975001 RAL-409_125b 859 chr2R 10979655 10979678 chr2R 10980135 10980166 297 5 502 3.5 3.5 3.5 1.1 511 chr2R 10979655 intergenic not near genes chr2R 10979910 intergenic not near genes chr2R 10980166 intergenic not near genes chr2R_5_10975001 chr2R_10975001 RAL-409_125b 860 chr2R 10992908 10992975 chr2R 10993039 10993099 19 118 7.0 8.0 7.5 2.2 191 chr2R 10992908 intron luna - chr2R 10993004 intron luna - chr2R 10993099 intron luna - chr2R_19_10990001 chr2R_10990001 RAL-409_125b 861 chr2R 10993214 10993290 chr2R 10993394 10993471 20 175 6.5 9.5 8.0 2.2 257 chr2R 10993214 intron luna - chr2R 10993342 intron luna - chr2R 10993471 intron luna - chr2R_20_10990001 chr2R_10990001 RAL-409_125b 862 chr2R 11009784 11009840 chr2R 11018993 11019059 roo 10 9216 7.0 6.0 6.5 1.3 9275 chr2R 11009784 intron luna - chr2R 11014422 intron luna - chr2R 11019059 intron luna - chr2R_10_11010001 chr2R_11010001 RAL-409_125b 863 chr2R 11019858 11019892 chr2R 11024974 11025008 jockey 6 5113 4.0 8.5 6.2 0.8 5150 chr2R 11019858 intron luna - chr2R 11022433 intron luna - chr2R 11025008 intron luna - chr2R_6_11020001 chr2R_11020001 RAL-409_125b 864 chr2R 11019896 11019904 chr2R 11024968 11024999 jockey 5 5095 3.5 7.0 5.2 0.8 5103 chr2R 11019896 intron luna - chr2R 11022448 intron luna - chr2R 11024999 intron luna - chr2R_5_11020001 chr2R_11020001 RAL-409_125b 865 chr2R 11032615 11032665 chr2R 11032749 11032809 12 138 1.5 5.5 3.5 2.7 194 chr2R 11032615 intron luna - chr2R 11032712 intron luna - chr2R 11032809 intron luna - chr2R_12_11030001 chr2R_11030001 RAL-409_125b 866 chr2R 11047030 11047079 chr2R 11047159 11047187 12 116 6.5 10.0 8.2 1.3 157 chr2R 11047030 intron luna - chr2R 11047108 intron luna - chr2R 11047187 intron luna - chr2R_12_11045001 chr2R_11045001 RAL-409_125b 867 chr2R 11058759 11058801 chr2R 11058882 11058930 12 122 2.0 10.0 6.0 1.7 171 chr2R 11058759 intron luna - chr2R 11058844 intron luna - chr2R 11058930 intron luna - chr2R_12_11055001 chr2R_11055001 RAL-409_125b 868 chr2R 11086347 11086406 chr2R 11086462 11086512 9 110 3.5 4.0 3.8 1.9 165 chr2R 11086347 intron,intron,3` UTR luna -,CG43188 +,CG43189 - chr2R 11086430 intron,intron,3` UTR luna -,CG43188 +,CG43189 - chr2R 11086512 intron,intron,exon luna -,CG43188 +,CG43189 - chr2R_9_11085001 chr2R_11085001 RAL-409_125b 869 chr2R 11118115 11118181 chr2R 11118243 11118308 6 126 0.0 4.5 2.2 1.9 193 chr2R 11118115 3` UTR Cyp12d1-p - chr2R 11118212 3` UTR Cyp12d1-p - chr2R 11118308 3` UTR Cyp12d1-p - chr2R_6_11115001 chr2R_11115001 RAL-409_125b 870 chr2R 11179225 11179275 chr2R 11179360 11179405 17 133 8.0 8.0 8.0 1.9 180 chr2R 11179225 intron shn + chr2R 11179315 intron shn + chr2R 11179405 intron shn + chr2R_17_11175001 chr2R_11175001 RAL-409_125b 871 chr2R 11184657 11184685 chr2R 11184771 11184807 6 109 8.5 9.0 8.8 0.6 150 chr2R 11184657 intron shn + chr2R 11184732 intron shn + chr2R 11184807 intron shn + chr2R_6_11180001 chr2R_11180001 RAL-409_125b 872 chr2R 11207785 11207831 chr2R 11208023 11208074 BS 6 238 7.5 11.5 9.5 0.6 289 chr2R 11207785 intron shn + chr2R 11207930 intron shn + chr2R 11208074 intron shn + chr2R_6_11205001 chr2R_11205001 RAL-409_125b 873 chr2R 11224038 11224055 chr2R 11224258 11224275 4 220 7.0 3.0 5.0 0.7 237 chr2R 11224038 intron CG7737 + chr2R 11224156 intron CG7737 + chr2R 11224275 intron CG7737 + chr2R_4_11220001 chr2R_11220001 RAL-409_125b 874 chr2R 11297589 11297640 chr2R 11301963 11302005 flea 14 4370 6.0 0.0 3.0 3.5 4416 chr2R 11297589 intergenic CG42336 - chr2R 11299797 intergenic not near genes chr2R 11302005 5` UTR CG7741 + chr2R_14_11295001 chr2R_11295001 RAL-409_125b 875 chr2R 11415393 11415437 chr2R 11415513 11415550 4 116 19.0 12.5 15.8 0.2 157 chr2R 11415393 intron,3` UTR Drip -,CG7763 + chr2R 11415472 intron Drip - chr2R 11415550 intron Drip - chr2R_4_11415001 chr2R_11415001 RAL-409_125b 876 chr2R 11415496 11415535 chr2R 11418668 11418734 opus 11 3186 6.5 4.5 5.5 1.7 3238 chr2R 11415496 intron Drip - chr2R 11417115 intron Drip - chr2R 11418734 intron Drip - chr2R_11_11415001 chr2R_11415001 RAL-409_125b 877 chr2R 11436609 11436617 chr2R 11436765 11436768 5 155 1.0 9.0 5.0 0.8 159 chr2R 11436609 intron CG7777 + chr2R 11436688 intron CG7777 + chr2R 11436768 intron CG7777 + chr2R_5_11435001 chr2R_11435001 RAL-409_125b 878 chr2R 11472618 11472675 chr2R 11473855 11473882 pogo 14 1240 9.5 6.0 7.8 1.6 1264 chr2R 11472618 intergenic not near genes chr2R 11473250 intergenic not near genes chr2R 11473882 intergenic not near genes chr2R_14_11470001 chr2R_11470001 RAL-409_125b 879 chr2R 11493243 11493296 chr2R 11493371 11493424 14 124 7.0 5.5 6.2 1.9 181 chr2R 11493243 intron inv + chr2R 11493334 intron inv + chr2R 11493424 intron inv + chr2R_14_11490001 chr2R_11490001 RAL-409_125b 880 chr2R 11497641 11497656 chr2R 11497770 11497785 6 129 2.0 11.0 6.5 0.8 144 chr2R 11497641 intron inv + chr2R 11497713 intron inv + chr2R 11497785 intron inv + chr2R_6_11495001 chr2R_11495001 RAL-409_125b 881 chr2R 11498793 11498848 chr2R 11498965 11499037 7 179 9.5 3.0 6.2 1.0 244 chr2R 11498793 intron inv + chr2R 11498915 intron inv + chr2R 11499037 intron inv + chr2R_7_11495001 chr2R_11495001 RAL-409_125b 882 chr2R 11614585 11614799 chr2R 11614723 11614937 17 138 0.5 0.5 0.5 11.3 352 chr2R 11614585 intron tou - chr2R 11614761 intron tou - chr2R 11614937 intron tou - chr2R_17_11610001 chr2R_11610001 RAL-409_125b 883 chr2R 11631325 11631410 chr2R 11631476 11631540 10 134 3.0 4.0 3.5 2.2 215 chr2R 11631325 intron CG9005 - chr2R 11631432 intron CG9005 - chr2R 11631540 intron CG9005 - chr2R_10_11630001 chr2R_11630001 RAL-409_125b 884 chr2R 11772666 11772685 chr2R 11772793 11772812 4 127 7.5 6.0 6.8 0.5 146 chr2R 11772666 intron ths + chr2R 11772739 intron ths + chr2R 11772812 intron ths + chr2R_4_11770001 chr2R_11770001 RAL-409_125b 885 chr2R 11891413 11891448 chr2R 11891607 11891642 10 194 4.5 10.5 7.5 1.2 229 chr2R 11891413 intron Ef1alpha48D + chr2R 11891528 intron Ef1alpha48D + chr2R 11891642 intron Ef1alpha48D + chr2R_10_11890001 chr2R_11890001 RAL-409_125b 886 chr2R 11928645 11928710 chr2R 11928773 11928837 11 127 6.0 5.5 5.8 1.6 192 chr2R 11928645 intergenic not near genes chr2R 11928741 intergenic not near genes chr2R 11928837 intergenic CR44312 - chr2R_11_11925001 chr2R_11925001 RAL-409_125b 887 chr2R 11945461 11945515 chr2R 11945775 11945791 12 307 5.5 8.5 7.0 1.5 330 chr2R 11945461 intron CG13188 + chr2R 11945626 intron CG13188 + chr2R 11945791 intron CG13188 + chr2R_12_11945001 chr2R_11945001 RAL-409_125b 888 chr2R 8518781 8518789 chr2R 12066145 12066149 4 3547353 22.5 17.5 20.0 0.2 3547368 chr2R 8518781 intron mtt - chr2R 10292465 intron CAP + chr2R 12066149 exon CG8888 - chr2R_4_10290001 chr2R_10290001 RAL-409_125b 889 chr2R 12096823 12096854 chr2R 12097286 12097356 8 492 1.5 5.5 3.5 1.8 533 chr2R 12096823 intron jeb - chr2R 12097090 intron jeb - chr2R 12097356 intron jeb - chr2R_8_12095001 chr2R_12095001 RAL-409_125b 890 chr2R 12146451 12146500 chr2R 12147596 12147649 15 1155 27.5 31.0 29.2 0.5 1198 chr2R 12146451 intron,3` UTR Hen1 +,CG8878 - chr2R 12147050 intron,exon Hen1 +,CG8878 - chr2R 12147649 intron,exon Hen1 +,CG8878 - chr2R_15_12145001 chr2R_12145001 RAL-409_125b 891 chr2R 12145924 12145972 chr2R 12148577 12148625 9 2657 31.5 37.5 34.5 0.3 2701 chr2R 12145924 exon Hen1 + chr2R 12147274 intron,intron Hen1 +,CG8878 - chr2R 12148625 intron,exon Hen1 +,CG8878 - chr2R_9_12145001 chr2R_12145001 RAL-409_125b 892 chr2R 12185958 12186036 chr2R 12186103 12186131 53 136 12.0 11.0 11.5 4.2 173 chr2R 12185958 intron Cyp6g1 + chr2R 12186044 intron Cyp6g1 + chr2R 12186131 intron Cyp6g1 + chr2R_53_12185001 chr2R_12185001 RAL-409_125b 893 chr2R 12185224 12185232 chr2R 12188099 12188107 4 2875 38.5 191.5 115.0 0.0 2883 chr2R 12185224 3` UTR,exon CG13175 +,CG33964 + chr2R 12186666 exon Cyp6g1 + chr2R 12188107 exon Cyp6g1 + chr2R_4_12185001 chr2R_12185001 RAL-409_125b 894 chr2R 12185221 12185268 chr2R 12188110 12188144 20 2882 31.5 188.0 109.8 0.2 2923 chr2R 12185221 3` UTR,exon CG13175 +,CG33964 + chr2R 12186682 exon Cyp6g1 + chr2R 12188144 3` UTR Cyp6g1 + chr2R_20_12185001 chr2R_12185001 RAL-409_125b 895 chr2R 12187479 12187492 chr2R 12190058 12190058 5 2572 97.5 117.5 107.5 0.0 2579 chr2R 12187479 exon Cyp6g1 + chr2R 12188768 exon Cyp6g2 - chr2R 12190058 exon Cyp6g2 - chr2R_5_12185001 chr2R_12185001 RAL-409_125b 896 chr2R 12187477 12187490 chr2R 12190061 12190069 10 2574 95.5 114.5 105.0 0.1 2592 chr2R 12187477 exon Cyp6g1 + chr2R 12188773 exon Cyp6g2 - chr2R 12190069 exon Cyp6g2 - chr2R_10_12185001 chr2R_12185001 RAL-409_125b 897 chr2R 12187476 12187526 chr2R 12190073 12190122 60 2588 121.0 104.0 112.5 0.5 2646 chr2R 12187476 exon Cyp6g1 + chr2R 12188799 exon Cyp6g2 - chr2R 12190122 exon Cyp6g2 - chr2R_60_12185001 chr2R_12185001 RAL-409_125b 898 chr2R 12235376 12235418 chr2R 12235541 12235588 12 168 12.0 11.5 11.8 0.9 212 chr2R 12235376 intergenic not near genes chr2R 12235482 intergenic not near genes chr2R 12235588 intergenic not near genes chr2R_12_12235001 chr2R_12235001 RAL-409_125b 899 chr2R 12272279 12272349 chr2R 12272412 12272482 18 128 5.5 8.5 7.0 2.2 203 chr2R 12272279 intron Cam + chr2R 12272380 intron Cam + chr2R 12272482 intron Cam + chr2R_18_12270001 chr2R_12270001 RAL-409_125b 900 chr2R 12363342 12363413 chr2R 12363814 12363859 14 475 7.0 3.0 5.0 2.3 517 chr2R 12363342 intergenic CG30043 + chr2R 12363600 intergenic CG30043 + chr2R 12363859 intergenic not near genes chr2R_14_12360001 chr2R_12360001 RAL-409_125b 901 chr2R 12377453 12377516 chr2R 12377625 12377682 17 170 6.5 6.0 6.2 2.4 229 chr2R 12377453 intergenic Cpr49Aa + chr2R 12377568 intergenic Cpr49Aa + chr2R 12377682 intergenic Cpr49Aa + chr2R_17_12375001 chr2R_12375001 RAL-409_125b 902 chr2R 12392980 12392987 chr2R 12393805 12393822 4 831 9.5 6.0 7.8 0.5 842 chr2R 12392980 intergenic not near genes chr2R 12393401 intergenic Or49a + chr2R 12393822 exon Or49a + chr2R_4_12390001 chr2R_12390001 RAL-409_125b 903 chr2R 12392989 12393025 chr2R 12393803 12393860 8 828 4.5 6.0 5.2 1.3 871 chr2R 12392989 intergenic Or49a + chr2R 12393424 intergenic Or49a + chr2R 12393860 exon Or49a + chr2R_8_12390001 chr2R_12390001 RAL-409_125b 904 chr2R 12479092 12479152 chr2R 12479230 12479263 9 119 1.5 6.0 3.8 1.9 171 chr2R 12479092 intron Dh44-R2 + chr2R 12479178 intron Dh44-R2 + chr2R 12479263 intron Dh44-R2 + chr2R_9_12475001 chr2R_12475001 RAL-409_125b 905 chr2R 12492062 12492121 chr2R 12492183 12492255 17 120 4.0 2.5 3.2 4.0 193 chr2R 12492062 intron fdl - chr2R 12492158 intron fdl - chr2R 12492255 intron fdl - chr2R_17_12490001 chr2R_12490001 RAL-409_125b 906 chr2R 12501652 12501681 chr2R 12503864 12503870 Rt1c 4 2203 13.5 6.0 9.8 0.4 2218 chr2R 12501652 intron fdl - chr2R 12502761 intron fdl - chr2R 12503870 intron fdl - chr2R_4_12500001 chr2R_12500001 RAL-409_125b 907 chr2R 12501690 12501717 chr2R 12503857 12503907 Rt1c 9 2190 5.0 5.5 5.2 1.5 2217 chr2R 12501690 intron fdl - chr2R 12502798 intron fdl - chr2R 12503907 intron fdl - chr2R_9_12500001 chr2R_12500001 RAL-409_125b 908 chr2R 12504105 12504177 chr2R 12504232 12504304 20 122 4.0 7.0 5.5 3.1 199 chr2R 12504105 intron fdl - chr2R 12504204 intron fdl - chr2R 12504304 intron fdl - chr2R_20_12500001 chr2R_12500001 RAL-409_125b 909 chr2R 12527230 12527296 chr2R 12527481 12527555 7 258 4.0 4.0 4.0 1.4 325 chr2R 12527230 intergenic not near genes chr2R 12527392 intergenic not near genes chr2R 12527555 intergenic not near genes chr2R_7_12525001 chr2R_12525001 RAL-409_125b 910 chr2R 12540440 12540496 chr2R 12540558 12540605 7 112 4.5 4.0 4.2 1.3 165 chr2R 12540440 intron fra + chr2R 12540522 intron fra + chr2R 12540605 intron fra + chr2R_7_12540001 chr2R_12540001 RAL-409_125b 911 chr2R 12548481 12548545 chr2R 12548603 12548663 11 123 1.5 7.0 4.2 2.1 182 chr2R 12548481 intron fra + chr2R 12548572 intron fra + chr2R 12548663 intron fra + chr2R_11_12545001 chr2R_12545001 RAL-409_125b 912 chr2R 12564997 12565019 chr2R 12565243 12565265 5 246 8.0 2.0 5.0 0.8 268 chr2R 12564997 intergenic CG33775 - chr2R 12565131 intergenic CG33775 - chr2R 12565265 intergenic CG33775 - chr2R_5_12565001 chr2R_12565001 RAL-409_125b 913 chr2R 12565526 12565582 chr2R 12565946 12566002 16 419 7.5 4.0 5.8 2.4 476 chr2R 12565526 intergenic not near genes chr2R 12565764 intergenic Cyp301a1 + chr2R 12566002 intergenic Cyp301a1 + chr2R_16_12565001 chr2R_12565001 RAL-409_125b 914 chr2R 12627436 12627499 chr2R 12627579 12627637 9 144 0.0 7.0 3.5 2.0 201 chr2R 12627436 intron CG17760 + chr2R 12627536 intron CG17760 + chr2R 12627637 exon CG17760 + chr2R_9_12625001 chr2R_12625001 RAL-409_125b 915 chr2R 12643750 12643812 chr2R 12643876 12643894 11 111 4.0 4.0 4.0 2.2 144 chr2R 12643750 intron CG8785 - chr2R 12643822 intron CG8785 - chr2R 12643894 exon CG8785 - chr2R_11_12640001 chr2R_12640001 RAL-409_125b 916 chr2R 12677384 12677388 chr2R 12677508 12677522 5 131 0.0 1.0 0.5 3.3 138 chr2R 12677384 intron CG42708 - chr2R 12677453 intron CG42708 - chr2R 12677522 intron CG42708 - chr2R_5_12675001 chr2R_12675001 RAL-409_125b 917 chr2R 12707469 12707545 chr2R 12715885 12715961 roo 7 8415 5.5 1.5 3.5 1.6 8492 chr2R 12707469 intron CG42663 + chr2R 12711715 intron CG42663 + chr2R 12715961 intron CG42663 + chr2R_7_12710001 chr2R_12710001 RAL-409_125b 918 chr2R 12777764 12777800 chr2R 12777905 12777908 5 134 3.5 3.5 3.5 1.1 144 chr2R 12777764 5` UTR CR45266 + chr2R 12777836 5` UTR CR45266 + chr2R 12777908 5` UTR CR45266 + chr2R_5_12775001 chr2R_12775001 RAL-409_125b 919 chr2R 12789260 12789319 chr2R 12797656 12797705 roo 16 8390 5.5 3.0 4.2 3.1 8445 chr2R 12789260 intron,3` UTR sca +,CR45137 - chr2R 12793482 intron,intron sca +,CR45137 - chr2R 12797705 intron,3` UTR sca +,CR45137 - chr2R_16_12790001 chr2R_12790001 RAL-409_125b 920 chr2R 12819103 12819171 chr2R 12819277 12819341 7 165 3.5 5.0 4.2 1.3 238 chr2R 12819103 intergenic not near genes chr2R 12819222 intergenic not near genes chr2R 12819341 intergenic not near genes chr2R_7_12815001 chr2R_12815001 RAL-409_125b 921 chr2R 12819403 12819432 chr2R 12824522 12824549 jockey 5 5116 9.0 6.0 7.5 0.6 5146 chr2R 12819403 intergenic not near genes chr2R 12821976 intergenic not near genes chr2R 12824549 intergenic not near genes chr2R_5_12820001 chr2R_12820001 RAL-409_125b 922 chr2R 12819433 12819477 chr2R 12824520 12824571 jockey 11 5105 3.0 6.0 4.5 2.0 5138 chr2R 12819433 intergenic not near genes chr2R 12822002 intergenic not near genes chr2R 12824571 intergenic not near genes chr2R_11_12820001 chr2R_12820001 RAL-409_125b 923 chr2R 12855550 12855625 chr2R 12855678 12855754 14 125 8.5 8.5 8.5 1.5 204 chr2R 12855550 intron CG17574 - chr2R 12855652 intron CG17574 - chr2R 12855754 intron CG17574 - chr2R_14_12855001 chr2R_12855001 RAL-409_125b 924 chr2R 13016117 13016188 chr2R 13016236 13016314 11 121 5.0 8.0 6.5 1.5 197 chr2R 13016117 intergenic not near genes chr2R 13016216 intergenic not near genes chr2R 13016314 intergenic not near genes chr2R_11_13015001 chr2R_13015001 RAL-409_125b 925 chr2R 13027693 13027740 chr2R 13027822 13027858 5 125 4.5 6.5 5.5 0.8 165 chr2R 13027693 intergenic not near genes chr2R 13027776 intergenic not near genes chr2R 13027858 intergenic not near genes chr2R_5_13025001 chr2R_13025001 RAL-409_125b 926 chr2R 13089707 13089783 chr2R 13089867 13089901 17 148 3.5 5.0 4.2 3.3 194 chr2R 13089707 intergenic not near genes chr2R 13089804 intergenic not near genes chr2R 13089901 intergenic not near genes chr2R_17_13085001 chr2R_13085001 RAL-409_125b 927 chr2R 13123138 13123166 chr2R 13123528 13123561 5 391 9.0 10.0 9.5 0.5 423 chr2R 13123138 5` UTR CG13325 + chr2R 13123350 exon CG13325 + chr2R 13123561 exon CG13325 + chr2R_5_13120001 chr2R_13120001 RAL-409_125b 928 chr2R 13123172 13123185 chr2R 13123527 13123573 6 383 4.5 10.0 7.2 0.7 401 chr2R 13123172 exon CG13325 + chr2R 13123372 exon CG13325 + chr2R 13123573 exon CG13325 + chr2R_6_13120001 chr2R_13120001 RAL-409_125b 929 chr2R 13136811 13136856 chr2R 13141659 13141704 Doc 14 4846 7.0 5.0 6.0 2.0 4893 chr2R 13136811 exon Cap-G + chr2R 13139258 intron Cap-G + chr2R 13141704 intron Cap-G + chr2R_14_13135001 chr2R_13135001 RAL-409_125b 930 chr2R 13167394 13167460 chr2R 13167538 13167610 10 145 6.0 0.0 3.0 2.5 216 chr2R 13167394 intron GLaz - chr2R 13167502 intron GLaz - chr2R 13167610 intron GLaz - chr2R_10_13165001 chr2R_13165001 RAL-409_125b 931 chr2R 13196519 13196580 chr2R 13197053 13197114 17 532 7.5 8.0 7.8 1.9 595 chr2R 13196519 intergenic not near genes chr2R 13196816 intergenic not near genes chr2R 13197114 intergenic not near genes chr2R_17_13195001 chr2R_13195001 RAL-409_125b 932 chr2R 13220538 13220566 chr2R 13220644 13220680 7 123 1.0 10.0 5.5 1.1 142 chr2R 13220538 intron CG17059 + chr2R 13220609 intron CG17059 + chr2R 13220680 intron CG17059 + chr2R_7_13220001 chr2R_13220001 RAL-409_125b 933 chr2R 13261129 13261170 chr2R 13261253 13261309 9 141 1.0 6.5 3.8 1.9 180 chr2R 13261129 intron CG42319 + chr2R 13261219 intron CG42319 + chr2R 13261309 intron CG42319 + chr2R_9_13260001 chr2R_13260001 RAL-409_125b 934 chr2R 13300082 13300102 chr2R 13300215 13300235 4 133 6.0 8.5 7.2 0.5 153 chr2R 13300082 intron CG17047 + chr2R 13300158 intron CG17047 + chr2R 13300235 exon CG17047 + chr2R_4_13300001 chr2R_13300001 RAL-409_125b 935 chr2R 13368743 13368789 chr2R 13368902 13368949 11 160 3.5 6.5 5.0 1.8 206 chr2R 13368743 intergenic not near genes chr2R 13368846 intergenic not near genes chr2R 13368949 intergenic not near genes chr2R_11_13365001 chr2R_13365001 RAL-409_125b 936 chr2R 13403880 13403916 chr2R 13404010 13404051 8 134 3.5 1.5 2.5 2.3 171 chr2R 13403880 intergenic not near genes chr2R 13403966 intergenic not near genes chr2R 13404051 intergenic not near genes chr2R_8_13400001 chr2R_13400001 RAL-409_125b 937 chr2R 13431840 13431847 chr2R 13431990 13432003 5 155 8.0 12.5 10.2 0.4 163 chr2R 13431840 intron CG42321 - chr2R 13431922 intron CG42321 - chr2R 13432003 intron CG42321 - chr2R_5_13430001 chr2R_13430001 RAL-409_125b 938 chr2R 13431850 13431864 chr2R 13431981 13432021 4 150 5.0 12.0 8.5 0.4 171 chr2R 13431850 intron CG42321 - chr2R 13431936 intron CG42321 - chr2R 13432021 intron CG42321 - chr2R_4_13430001 chr2R_13430001 RAL-409_125b 939 chr2R 13439083 13439139 chr2R 13439270 13439327 15 184 7.0 9.0 8.0 1.7 244 chr2R 13439083 intergenic CG42321 -,cnn - chr2R 13439205 intergenic cnn -,CG42321 - chr2R 13439327 3` UTR cnn - chr2R_15_13435001 chr2R_13435001 RAL-409_125b 940 chr2R 13449664 13449684 chr2R 13449791 13449811 6 127 2.0 0.5 1.2 2.7 147 chr2R 13449664 intron cnn - chr2R 13449738 intron cnn - chr2R 13449811 intron cnn - chr2R_6_13445001 chr2R_13445001 RAL-409_125b 941 chr2R 13544513 13544548 chr2R 13544639 13544674 10 125 0.0 6.0 3.0 2.5 161 chr2R 13544513 intron CG6145 - chr2R 13544594 intron CG6145 - chr2R 13544674 intron CG6145 - chr2R_10_13540001 chr2R_13540001 RAL-409_125b 942 chr2R 13554696 13554765 chr2R 13554831 13554900 9 133 0.0 6.0 3.0 2.2 204 chr2R 13554696 intron Roe1 + chr2R 13554798 intron Roe1 + chr2R 13554900 intron Roe1 + chr2R_9_13550001 chr2R_13550001 RAL-409_125b 943 chr2R 13574360 13574423 chr2R 13574491 13574544 15 123 1.5 2.5 2.0 5.0 184 chr2R 13574360 intergenic CG42808 - chr2R 13574452 intergenic CG42808 -,CR44365 + chr2R 13574544 intergenic CG42808 -,CR44365 + chr2R_15_13570001 chr2R_13570001 RAL-409_125b 944 chr2R 13580455 13580478 chr2R 13580855 13580860 jockey 5 394 12.0 4.0 8.0 0.6 405 chr2R 13580455 3` UTR CG6191 - chr2R 13580658 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580860 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_5_13580001 chr2R_13580001 RAL-409_125b 945 chr2R 13580482 13580530 chr2R 13580854 13580901 jockey 13 389 7.0 3.5 5.2 2.1 419 chr2R 13580482 3` UTR CG6191 - chr2R 13580692 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580901 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_13_13580001 chr2R_13580001 RAL-409_125b 946 chr2R 13601495 13601512 chr2R 13601610 13601636 4 119 9.0 4.0 6.5 0.5 141 chr2R 13601495 intergenic CG43058 - chr2R 13601566 intergenic CG43058 - chr2R 13601636 intergenic not near genes chr2R_4_13600001 chr2R_13600001 RAL-409_125b 947 chr2R 13622169 13622189 chr2R 13622297 13622317 7 128 8.0 12.0 10.0 0.6 148 chr2R 13622169 intergenic not near genes chr2R 13622243 intergenic not near genes chr2R 13622317 intergenic not near genes chr2R_7_13620001 chr2R_13620001 RAL-409_125b 948 chr2R 13648673 13648748 chr2R 13649154 13649201 8 473 6.0 5.0 5.5 1.2 528 chr2R 13648673 intron fas + chr2R 13648937 intron fas + chr2R 13649201 intron fas + chr2R_8_13645001 chr2R_13645001 RAL-409_125b 949 chr2R 13649974 13650034 chr2R 13650119 13650179 15 143 5.0 9.5 7.2 1.8 205 chr2R 13649974 intron fas + chr2R 13650076 intron fas + chr2R 13650179 intron fas + chr2R_15_13650001 chr2R_13650001 RAL-409_125b 950 chr2R 13694594 13694650 chr2R 13694711 13694741 12 120 9.0 8.5 8.8 1.2 147 chr2R 13694594 intron fas + chr2R 13694668 intron fas + chr2R 13694741 intron fas + chr2R_12_13690001 chr2R_13690001 RAL-409_125b 951 chr2R 13709796 13709847 chr2R 13709939 13709984 9 142 7.5 7.5 7.5 1.1 188 chr2R 13709796 intron fas + chr2R 13709890 intron fas + chr2R 13709984 intron fas + chr2R_9_13705001 chr2R_13705001 RAL-409_125b 952 chr2R 13721179 13721194 chr2R 13721290 13721300 4 116 9.5 7.0 8.2 0.4 121 chr2R 13721179 intron fas + chr2R 13721240 intron fas + chr2R 13721300 intron fas + chr2R_4_13720001 chr2R_13720001 RAL-409_125b 953 chr2R 13721195 13721227 chr2R 13721287 13721348 6 113 6.5 7.0 6.8 0.8 153 chr2R 13721195 intron fas + chr2R 13721272 intron fas + chr2R 13721348 intron fas + chr2R_6_13720001 chr2R_13720001 RAL-409_125b 954 chr2R 13726257 13726269 chr2R 13726439 13726451 6 181 1.5 5.0 3.2 1.4 194 chr2R 13726257 exon fas + chr2R 13726354 intron fas + chr2R 13726451 intron fas + chr2R_6_13725001 chr2R_13725001 RAL-409_125b 955 chr2R 13728096 13728153 chr2R 13735803 13735860 opus 9 7704 7.0 4.5 5.8 1.3 7764 chr2R 13728096 intron fas + chr2R 13731978 intron fas + chr2R 13735860 intron fas + chr2R_9_13730001 chr2R_13730001 RAL-409_125b 956 chr2R 13768942 13768988 chr2R 13769091 13769137 13 144 4.5 6.0 5.2 2.1 195 chr2R 13768942 intergenic not near genes chr2R 13769040 intergenic not near genes chr2R 13769137 intergenic not near genes chr2R_13_13765001 chr2R_13765001 RAL-409_125b 957 chr2R 13888724 13888790 chr2R 13888851 13888929 8 131 3.5 0.0 1.8 2.9 205 chr2R 13888724 intron shot - chr2R 13888826 intron shot - chr2R 13888929 intron shot - chr2R_8_13885001 chr2R_13885001 RAL-409_125b 958 chr2R 13905568 13905625 chr2R 13907600 13907650 Rt1a 13 2023 7.0 9.0 8.0 1.4 2082 chr2R 13905568 intron shot - chr2R 13906609 intron shot - chr2R 13907650 intron shot - chr2R_13_13905001 chr2R_13905001 RAL-409_125b 959 chr2R 13925809 13925853 chr2R 13926030 13926073 14 224 9.5 7.0 8.2 1.5 264 chr2R 13925809 intron shot - chr2R 13925941 intron shot - chr2R 13926073 intron shot - chr2R_14_13925001 chr2R_13925001 RAL-409_125b 960 chr2R 14018124 14018180 chr2R 14018253 14018313 19 133 4.0 3.0 3.5 4.2 189 chr2R 14018124 intron mam + chr2R 14018218 intron mam + chr2R 14018313 intron mam + chr2R_19_14015001 chr2R_14015001 RAL-409_125b 961 chr2R 14036548 14036577 chr2R 14036684 14036713 8 135 3.5 3.5 3.5 1.8 165 chr2R 14036548 intron mam + chr2R 14036630 intron mam + chr2R 14036713 intron mam + chr2R_8_14035001 chr2R_14035001 RAL-409_125b 962 chr2R 14050823 14050848 chr2R 14050949 14050968 6 122 6.5 9.5 8.0 0.7 145 chr2R 14050823 intron mam + chr2R 14050896 intron mam + chr2R 14050968 intron mam + chr2R_6_14050001 chr2R_14050001 RAL-409_125b 963 chr2R 14084163 14084199 chr2R 14084292 14084328 7 127 1.0 1.0 1.0 3.5 165 chr2R 14084163 intron Prosap - chr2R 14084246 intron Prosap - chr2R 14084328 intron Prosap - chr2R_7_14080001 chr2R_14080001 RAL-409_125b 964 chr2R 14141922 14141942 chr2R 14142077 14142097 8 154 10.5 13.5 12.0 0.6 175 chr2R 14141922 intergenic not near genes chr2R 14142010 intergenic not near genes chr2R 14142097 intergenic not near genes chr2R_8_14140001 chr2R_14140001 RAL-409_125b 965 chr2R 14266721 14266735 chr2R 14266837 14266841 4 117 9.0 3.0 6.0 0.6 120 chr2R 14266721 intron CG8547 - chr2R 14266781 intron CG8547 - chr2R 14266841 intron CG8547 - chr2R_4_14265001 chr2R_14265001 RAL-409_125b 966 chr2R 14266736 14266790 chr2R 14266836 14266861 15 116 6.0 3.0 4.5 2.7 125 chr2R 14266736 intron CG8547 - chr2R 14266798 intron CG8547 - chr2R 14266861 intron CG8547 - chr2R_15_14265001 chr2R_14265001 RAL-409_125b 967 chr2R 14285009 14285044 chr2R 14285142 14285176 9 133 6.0 2.5 4.2 1.7 167 chr2R 14285009 intron Ih + chr2R 14285092 intron Ih + chr2R 14285176 intron Ih + chr2R_9_14285001 chr2R_14285001 RAL-409_125b 968 chr2R 14290246 14290324 chr2R 14290387 14290436 15 130 4.0 6.0 5.0 2.5 190 chr2R 14290246 intron Ih + chr2R 14290341 intron Ih + chr2R 14290436 intron Ih + chr2R_15_14290001 chr2R_14290001 RAL-409_125b 969 chr2R 14467246 14467323 chr2R 14476443 14476509 roo 14 9197 2.5 3.0 2.8 3.7 9263 chr2R 14467246 intergenic not near genes chr2R 14471878 intergenic not near genes chr2R 14476509 5` UTR CR44462 + chr2R_14_14470001 chr2R_14470001 RAL-409_125b 970 chr2R 14497373 14497422 chr2R 14498589 14498644 1360 11 1221 3.0 3.0 3.0 2.8 1271 chr2R 14497373 3` UTR Cpsf160 - chr2R 14498008 intron Cpsf160 - chr2R 14498644 3` UTR Cpsf160 - chr2R_11_14495001 chr2R_14495001 RAL-409_125b 971 chr2R 14514447 14514497 chr2R 14514588 14514639 5 143 1.0 4.0 2.5 1.4 192 chr2R 14514447 intron,exon Cpr51A -,CG30197 + chr2R 14514543 intron,intron Cpr51A -,CG30197 + chr2R 14514639 intron,intron Cpr51A -,CG30197 + chr2R_5_14510001 chr2R_14510001 RAL-409_125b 972 chr2R 14631279 14631347 chr2R 14631424 14631472 6 138 3.5 0.5 2.0 2.0 193 chr2R 14631279 intergenic CG10131 + chr2R 14631376 intergenic CG10131 + chr2R 14631472 intergenic CG10131 + chr2R_6_14630001 chr2R_14630001 RAL-409_125b 973 chr2R 14700483 14700497 chr2R 14700679 14700683 5 193 5.5 9.5 7.5 0.6 200 chr2R 14700483 intron mspo - chr2R 14700583 intron mspo - chr2R 14700683 intron mspo - chr2R_5_14700001 chr2R_14700001 RAL-409_125b 974 chr2R 14707027 14707098 chr2R 14707149 14707228 11 129 6.5 4.5 5.5 1.7 201 chr2R 14707027 intron mspo - chr2R 14707128 intron mspo - chr2R 14707228 intron mspo - chr2R_11_14705001 chr2R_14705001 RAL-409_125b 975 chr2R 14712509 14712581 chr2R 14712635 14712707 12 125 6.0 7.5 6.8 1.5 198 chr2R 14712509 intron mspo - chr2R 14712608 intron mspo - chr2R 14712707 intron mspo - chr2R_12_14710001 chr2R_14710001 RAL-409_125b 976 chr2R 14722274 14722290 chr2R 14722428 14722437 4 150 5.0 7.5 6.2 0.6 163 chr2R 14722274 intergenic not near genes chr2R 14722356 intergenic not near genes chr2R 14722437 intergenic not near genes chr2R_4_14720001 chr2R_14720001 RAL-409_125b 977 chr2R 14729912 14729987 chr2R 14730046 14730121 12 133 2.5 2.0 2.2 3.8 209 chr2R 14729912 intergenic not near genes chr2R 14730016 intergenic not near genes chr2R 14730121 intergenic not near genes chr2R_12_14730001 chr2R_14730001 RAL-409_125b 978 chr2R 14733585 14733618 chr2R 14733689 14733747 10 118 4.5 5.5 5.0 1.7 162 chr2R 14733585 intergenic not near genes chr2R 14733666 intergenic not near genes chr2R 14733747 intergenic not near genes chr2R_10_14730001 chr2R_14730001 RAL-409_125b 979 chr2R 14799869 14799892 chr2R 14799990 14800018 8 124 1.5 10.5 6.0 1.1 149 chr2R 14799869 intron kn - chr2R 14799944 intron kn - chr2R 14800018 intron kn - chr2R_8_14795001 chr2R_14795001 RAL-409_125b 980 chr2R 14803435 14803477 chr2R 14803565 14803607 9 129 0.5 3.5 2.0 3.0 172 chr2R 14803435 intron kn - chr2R 14803521 intron kn - chr2R 14803607 intron kn - chr2R_9_14800001 chr2R_14800001 RAL-409_125b 981 chr2R 14842343 14842390 chr2R 14842489 14842536 9 144 4.0 0.5 2.2 2.8 193 chr2R 14842343 intergenic NaPi-T - chr2R 14842440 intergenic NaPi-T - chr2R 14842536 intergenic NaPi-T - chr2R_9_14840001 chr2R_14840001 RAL-409_125b 982 chr2R 14854986 14855023 chr2R 14855127 14855132 8 137 4.5 0.0 2.2 2.5 146 chr2R 14854986 5` UTR Ciao1 - chr2R 14855059 intergenic Ciao1 -,HPS1 + chr2R 14855132 intergenic Ciao1 -,HPS1 + chr2R_8_14855001 chr2R_14855001 RAL-409_125b 983 chr2R 14866478 14866488 chr2R 14866621 14866641 5 149 4.5 13.5 9.0 0.5 163 chr2R 14866478 intron Inr-a - chr2R 14866560 intron Inr-a - chr2R 14866641 intron Inr-a - chr2R_5_14865001 chr2R_14865001 RAL-409_125b 984 chr2R 14873649 14873704 chr2R 14875217 14875266 8 1567 7.5 1.5 4.5 1.5 1617 chr2R 14873649 intergenic Cyp6a22 +,Cyp6a17 + chr2R 14874458 exon Cyp6a17 + chr2R 14875266 exon Cyp6a17 + chr2R_8_14870001 chr2R_14870001 RAL-409_125b 985 chr2R 14875212 14875263 chr2R 14875664 14875720 16 457 3.5 8.5 6.0 2.3 508 chr2R 14875212 exon Cyp6a17 + chr2R 14875466 exon Cyp6a17 + chr2R 14875720 3` UTR Cyp6a17 + chr2R_16_14875001 chr2R_14875001 RAL-409_125b 986 chr2R 14889168 14889242 chr2R 14897826 14897892 Max-element 20 8652 7.5 0.0 3.8 4.2 8724 chr2R 14889168 intergenic Cyp6a8 - chr2R 14893530 intergenic not near genes chr2R 14897892 intergenic not near genes chr2R_20_14890001 chr2R_14890001 RAL-409_125b 987 chr2R 14911658 14911718 chr2R 14911826 14911891 14 172 5.5 3.0 4.2 2.7 233 chr2R 14911658 intron CG10249 - chr2R 14911774 intron CG10249 - chr2R 14911891 intron CG10249 - chr2R_14_14910001 chr2R_14910001 RAL-409_125b 988 chr2R 14916504 14916558 chr2R 14916634 14916688 14 130 4.0 1.0 2.5 4.0 184 chr2R 14916504 intron CG10249 - chr2R 14916596 intron CG10249 - chr2R 14916688 intron CG10249 - chr2R_14_14915001 chr2R_14915001 RAL-409_125b 989 chr2R 14919104 14919148 chr2R 14919263 14919307 9 158 5.0 0.0 2.5 2.6 203 chr2R 14919104 intron CG10249 - chr2R 14919206 intron CG10249 - chr2R 14919307 intron CG10249 - chr2R_9_14915001 chr2R_14915001 RAL-409_125b 990 chr2R 14922108 14922119 chr2R 14922224 14922237 6 122 9.0 5.5 7.2 0.7 129 chr2R 14922108 intron CG10249 - chr2R 14922172 intron CG10249 - chr2R 14922237 intron CG10249 - chr2R_6_14920001 chr2R_14920001 RAL-409_125b 991 chr2R 14922124 14922171 chr2R 14922219 14922297 11 114 6.5 5.0 5.8 1.6 173 chr2R 14922124 intron CG10249 - chr2R 14922210 intron CG10249 - chr2R 14922297 intron CG10249 - chr2R_11_14920001 chr2R_14920001 RAL-409_125b 992 chr2R 14930809 14930857 chr2R 14930952 14931000 5 143 1.5 2.5 2.0 1.7 191 chr2R 14930809 intron CG10253 - chr2R 14930904 intron CG10253 - chr2R 14931000 intron CG10253 - chr2R_5_14930001 chr2R_14930001 RAL-409_125b 993 chr2R 14955627 14955700 chr2R 14955766 14955839 14 139 4.0 8.0 6.0 2.0 212 chr2R 14955627 intron aPKC - chr2R 14955733 intron aPKC - chr2R 14955839 intron aPKC - chr2R_14_14955001 chr2R_14955001 RAL-409_125b 994 chr2R 15001557 15001618 chr2R 15001702 15001745 10 141 4.0 5.0 4.5 1.8 188 chr2R 15001557 intergenic not near genes chr2R 15001651 intergenic not near genes chr2R 15001745 intergenic not near genes chr2R_10_15000001 chr2R_15000001 RAL-409_125b 995 chr2R 15004684 15004750 chr2R 15005060 15005129 jockey 13 379 4.5 7.5 6.0 1.9 445 chr2R 15004684 intergenic not near genes chr2R 15004906 intergenic not near genes chr2R 15005129 intergenic not near genes chr2R_13_15000001 chr2R_15000001 RAL-409_125b 996 chr2R 15015426 15015480 chr2R 15022888 15022913 mdg1 12 7461 5.5 2.0 3.8 2.5 7487 chr2R 15015426 intron hbs + chr2R 15019170 intron hbs + chr2R 15022913 intron hbs + chr2R_12_15015001 chr2R_15015001 RAL-409_125b 997 chr2R 15051037 15051106 chr2R 15051164 15051238 20 129 4.0 5.5 4.8 3.4 201 chr2R 15051037 intergenic not near genes chr2R 15051138 intergenic not near genes chr2R 15051238 intergenic not near genes chr2R_20_15050001 chr2R_15050001 RAL-409_125b 998 chr2R 15065582 15065641 chr2R 15065699 15065708 8 110 6.5 4.5 5.5 1.2 126 chr2R 15065582 intergenic not near genes chr2R 15065645 intergenic not near genes chr2R 15065708 intergenic not near genes chr2R_8_15065001 chr2R_15065001 RAL-409_125b 999 chr2R 15094839 15094907 chr2R 15094965 15095034 12 128 0.5 4.5 2.5 3.4 195 chr2R 15094839 intergenic not near genes chr2R 15094936 intergenic not near genes chr2R 15095034 intergenic not near genes chr2R_12_15090001 chr2R_15090001 RAL-409_125b 1000 chr2R 15110356 15110371 chr2R 15110582 15110592 4 225 9.0 5.0 7.0 0.5 236 chr2R 15110356 intergenic not near genes chr2R 15110474 intergenic not near genes chr2R 15110592 intergenic not near genes chr2R_4_15110001 chr2R_15110001 RAL-409_125b 1001 chr2R 15119279 15119330 chr2R 15127810 15127846 Tirant 13 8514 9.0 6.5 7.8 1.5 8567 chr2R 15119279 intron chn + chr2R 15123562 intron chn + chr2R 15127846 intron chn + chr2R_13_15120001 chr2R_15120001 RAL-409_125b 1002 chr2R 15137926 15137983 chr2R 15138055 15138095 8 124 6.0 2.5 4.2 1.5 169 chr2R 15137926 intron chn + chr2R 15138010 intron chn + chr2R 15138095 intron chn + chr2R_8_15135001 chr2R_15135001 RAL-409_125b 1003 chr2R 15145557 15145616 chr2R 15145689 15145748 7 132 13.5 7.5 10.5 0.6 191 chr2R 15145557 intergenic Rpb12 -,CG8089 - chr2R 15145652 intergenic Rpb12 -,CG8089 - chr2R 15145748 intergenic CG8089 -,Rpb12 - chr2R_7_15145001 chr2R_15145001 RAL-409_125b 1004 chr2R 15277071 15277124 chr2R 15277215 15277272 11 144 5.5 4.5 5.0 1.8 201 chr2R 15277071 intron Trpm - chr2R 15277172 intron Trpm - chr2R 15277272 intron Trpm - chr2R_11_15275001 chr2R_15275001 RAL-409_125b 1005 chr2R 15285532 15285575 chr2R 15285653 15285701 9 124 3.5 4.0 3.8 1.9 169 chr2R 15285532 intron Trpm - chr2R 15285616 intron Trpm - chr2R 15285701 intron Trpm - chr2R_9_15285001 chr2R_15285001 RAL-409_125b 1006 chr2R 15295245 15295390 chr2R 15295394 15295520 5 169 0.0 0.5 0.2 4.2 275 chr2R 15295245 intron Trpm - chr2R 15295382 intron Trpm - chr2R 15295520 intron Trpm - chr2R_5_15295001 chr2R_15295001 RAL-409_125b 1007 chr2R 15315703 15315745 chr2R 15315830 15315865 11 124 10.5 13.5 12.0 0.8 162 chr2R 15315703 exon mus210 + chr2R 15315784 exon mus210 + chr2R 15315865 exon mus210 + chr2R_11_15315001 chr2R_15315001 RAL-409_125b 1008 chr2R 15351408 15351471 chr2R 15351546 15351612 19 136 7.0 6.5 6.8 2.4 204 chr2R 15351408 intron unc-5 + chr2R 15351510 intron unc-5 + chr2R 15351612 intron unc-5 + chr2R_19_15350001 chr2R_15350001 RAL-409_125b 1009 chr2R 15363620 15363673 chr2R 15363746 15363803 7 118 6.5 6.0 6.2 1.0 183 chr2R 15363620 intron unc-5 + chr2R 15363712 intron unc-5 + chr2R 15363803 intron unc-5 + chr2R_7_15360001 chr2R_15360001 RAL-409_125b 1010 chr2R 15390358 15390415 chr2R 15390500 15390554 16 135 0.5 5.0 2.8 4.2 196 chr2R 15390358 intergenic not near genes chr2R 15390456 intergenic not near genes chr2R 15390554 intergenic not near genes chr2R_16_15390001 chr2R_15390001 RAL-409_125b 1011 chr2R 15402544 15402609 chr2R 15402707 15402772 21 156 5.0 4.5 4.8 3.6 228 chr2R 15402544 intron CG43729 + chr2R 15402658 intron CG43729 + chr2R 15402772 intron CG43729 + chr2R_21_15400001 chr2R_15400001 RAL-409_125b 1012 chr2R 15422534 15422546 chr2R 15422656 15422673 6 126 2.0 13.0 7.5 0.7 139 chr2R 15422534 intron CG43729 + chr2R 15422604 intron CG43729 + chr2R 15422673 intron CG43729 + chr2R_6_15420001 chr2R_15420001 RAL-409_125b 1013 chr2R 15537667 15537728 chr2R 15537799 15537860 16 131 5.0 4.5 4.8 2.8 193 chr2R 15537667 3` UTR CG30471 + chr2R 15537764 3` UTR CG30471 + chr2R 15537860 intergenic CG30471 +,CG30467 + chr2R_16_15535001 chr2R_15535001 RAL-409_125b 1014 chr2R 15585704 15585778 chr2R 15585838 15585912 9 132 2.5 4.0 3.2 2.1 208 chr2R 15585704 intergenic not near genes chr2R 15585808 intergenic not near genes chr2R 15585912 intergenic not near genes chr2R_9_15585001 chr2R_15585001 RAL-409_125b 1015 chr2R 15593278 15593284 chr2R 15593419 15593430 6 144 7.5 12.5 10.0 0.5 152 chr2R 15593278 intergenic not near genes chr2R 15593354 intergenic not near genes chr2R 15593430 intergenic not near genes chr2R_6_15590001 chr2R_15590001 RAL-409_125b 1016 chr2R 15606048 15606099 chr2R 15606170 15606226 12 125 8.5 6.0 7.2 1.5 178 chr2R 15606048 intergenic not near genes chr2R 15606137 intergenic not near genes chr2R 15606226 intergenic not near genes chr2R_12_15605001 chr2R_15605001 RAL-409_125b 1017 chr2R 15655946 15656004 chr2R 15656075 15656134 8 128 6.0 5.5 5.8 1.2 188 chr2R 15655946 intron CG42524 + chr2R 15656040 intron CG42524 + chr2R 15656134 intron CG42524 + chr2R_8_15655001 chr2R_15655001 RAL-409_125b 1018 chr2R 15675067 15675140 chr2R 15675194 15675242 15 122 5.5 6.0 5.8 2.2 175 chr2R 15675067 intron fus - chr2R 15675154 intron fus - chr2R 15675242 intron fus - chr2R_15_15675001 chr2R_15675001 RAL-409_125b 1019 chr2R 15810355 15810396 chr2R 15810479 15810525 8 125 3.5 7.0 5.2 1.3 170 chr2R 15810355 intron,intron Zasp52 -,tun + chr2R 15810440 intron,intron Zasp52 -,tun + chr2R 15810525 intron,intron Zasp52 -,tun + chr2R_8_15810001 chr2R_15810001 RAL-409_125b 1020 chr2R 15812984 15813001 chr2R 15813162 15813179 4 176 3.5 9.0 6.2 0.6 195 chr2R 15812984 intron,intron Zasp52 -,tun + chr2R 15813082 intron,intron Zasp52 -,tun + chr2R 15813179 intron,intron Zasp52 -,tun + chr2R_4_15810001 chr2R_15810001 RAL-409_125b 1021 chr2R 15816384 15816433 chr2R 15816538 15816598 9 160 2.5 5.5 4.0 1.8 214 chr2R 15816384 intron,intron Zasp52 -,tun + chr2R 15816491 intron,intron Zasp52 -,tun + chr2R 15816598 intron,intron Zasp52 -,tun + chr2R_9_15815001 chr2R_15815001 RAL-409_125b 1022 chr2R 15861202 15861206 chr2R 15861329 15861333 4 127 2.5 7.5 5.0 0.7 131 chr2R 15861202 intron Gpo-1 - chr2R 15861268 intron Gpo-1 - chr2R 15861333 intron Gpo-1 - chr2R_4_15860001 chr2R_15860001 RAL-409_125b 1023 chr2R 15861215 15861263 chr2R 15861326 15861385 13 121 2.5 7.0 4.8 2.2 170 chr2R 15861215 intron Gpo-1 - chr2R 15861300 intron Gpo-1 - chr2R 15861385 intron Gpo-1 - chr2R_13_15860001 chr2R_15860001 RAL-409_125b 1024 chr2R 15873806 15873878 chr2R 15873950 15874021 10 132 3.0 3.5 3.2 2.4 215 chr2R 15873806 intron sli - chr2R 15873914 intron sli - chr2R 15874021 intron sli - chr2R_10_15870001 chr2R_15870001 RAL-409_125b 1025 chr2R 15877920 15877960 chr2R 15878055 15878090 4 132 5.0 5.0 5.0 0.7 170 chr2R 15877920 intron sli - chr2R 15878005 intron sli - chr2R 15878090 intron sli - chr2R_4_15875001 chr2R_15875001 RAL-409_125b 1026 chr2R 16007808 16007870 chr2R 16007923 16007987 14 122 8.5 7.5 8.0 1.6 179 chr2R 16007808 intergenic CG8386 - chr2R 16007898 intergenic CG8386 -,CG8389 + chr2R 16007987 intergenic CG8386 -,CG8389 + chr2R_14_16005001 chr2R_16005001 RAL-409_125b 1027 chr2R 16037177 16037227 chr2R 16037331 16037386 6 152 7.5 6.5 7.0 0.8 209 chr2R 16037177 intron SP2353 + chr2R 16037282 intron SP2353 + chr2R 16037386 intron SP2353 + chr2R_6_16035001 chr2R_16035001 RAL-409_125b 1028 chr2R 16054945 16054961 chr2R 16055039 16055065 5 101 7.5 7.5 7.5 0.6 120 chr2R 16054945 intron CG8405 + chr2R 16055005 intron CG8405 + chr2R 16055065 intron CG8405 + chr2R_5_16055001 chr2R_16055001 RAL-409_125b 1029 chr2R 16061682 16061713 chr2R 16064363 16064394 Burdock 11 2679 11.5 3.5 7.5 1.3 2712 chr2R 16061682 intergenic not near genes chr2R 16063038 intergenic not near genes chr2R 16064394 intergenic not near genes chr2R_11_16060001 chr2R_16060001 RAL-409_125b 1030 chr2R 16075358 16075397 chr2R 16075486 16075525 7 128 7.5 5.5 6.5 0.9 167 chr2R 16075358 intergenic not near genes chr2R 16075442 intergenic not near genes chr2R 16075525 intergenic not near genes chr2R_7_16075001 chr2R_16075001 RAL-409_125b 1031 chr2R 16243518 16243579 chr2R 16243705 16243746 10 181 1.5 2.0 1.8 3.6 228 chr2R 16243518 3` UTR CngA - chr2R 16243632 3` UTR CngA - chr2R 16243746 3` UTR CngA - chr2R_10_16240001 chr2R_16240001 RAL-409_125b 1032 chr2R 16245379 16245422 chr2R 16245518 16245549 4 138 3.0 1.5 2.2 1.2 170 chr2R 16245379 intron CngA - chr2R 16245464 intron CngA - chr2R 16245549 intron CngA - chr2R_4_16245001 chr2R_16245001 RAL-409_125b 1033 chr2R 16305221 16305251 chr2R 16305332 16305332 10 127 13.0 7.5 10.2 0.9 111 chr2R 16305221 3` UTR CR45232 - chr2R 16305276 3` UTR CR45232 - chr2R 16305332 3` UTR CR45232 - chr2R_10_16305001 chr2R_16305001 RAL-409_125b 1034 chr2R 16419275 16419328 chr2R 16419663 16419688 10 382 7.0 7.5 7.2 1.2 413 chr2R 16419275 intron,5` UTR,5` UTR Sema-2b +,Menl-1 -,Menl-2 - chr2R 16419482 intron Sema-2b + chr2R 16419688 intron Sema-2b + chr2R_10_16415001 chr2R_16415001 RAL-409_125b 1035 chr2R 16438069 16438119 chr2R 16438413 16438463 10 343 8.0 2.5 5.2 1.6 394 chr2R 16438069 intergenic not near genes chr2R 16438266 intergenic not near genes chr2R 16438463 intergenic not near genes chr2R_10_16435001 chr2R_16435001 RAL-409_125b 1036 chr2R 16539591 16539616 chr2R 16544847 16544866 copia 5 5253 8.0 0.0 4.0 1.0 5275 chr2R 16539591 intergenic not near genes chr2R 16542228 intergenic not near genes chr2R 16544866 intergenic not near genes chr2R_5_16540001 chr2R_16540001 RAL-409_125b 1037 chr2R 16571843 16571920 chr2R 16576531 16576608 13 4693 11.5 44.5 28.0 0.4 4765 chr2R 16571843 intergenic CG4927 + chr2R 16574226 intergenic CG4927 +,CG8317 - chr2R 16576608 intergenic CG8317 - chr2R_13_16570001 chr2R_16570001 RAL-409_125b 1038 chr2R 16596888 16596942 chr2R 16597090 16597155 7 210 7.0 7.0 7.0 0.9 267 chr2R 16596888 exon CG8303 - chr2R 16597022 intron CG8303 - chr2R 16597155 intron CG8303 - chr2R_7_16595001 chr2R_16595001 RAL-409_125b 1039 chr2R 16641631 16641665 chr2R 16641763 16641792 10 128 8.0 8.5 8.2 1.1 161 chr2R 16641631 5` UTR gprs + chr2R 16641712 intron gprs + chr2R 16641792 intron gprs + chr2R_10_16640001 chr2R_16640001 RAL-409_125b 1040 chr2R 16641667 16641695 chr2R 16641758 16641817 9 114 4.5 8.0 6.2 1.2 150 chr2R 16641667 5` UTR gprs + chr2R 16641742 intron gprs + chr2R 16641817 intron gprs + chr2R_9_16640001 chr2R_16640001 RAL-409_125b 1041 chr2R 16668148 16668218 chr2R 16668266 16668346 17 121 5.5 7.0 6.2 2.4 198 chr2R 16668148 intergenic Picot - chr2R 16668247 intergenic not near genes chr2R 16668346 intergenic not near genes chr2R_17_16665001 chr2R_16665001 RAL-409_125b 1042 chr2R 16672771 16672816 chr2R 16672881 16672940 8 126 6.0 5.5 5.8 1.2 169 chr2R 16672771 exon CG34458 + chr2R 16672856 3` UTR CG34458 + chr2R 16672940 intergenic CG34458 +,CG30463 - chr2R_8_16670001 chr2R_16670001 RAL-409_125b 1043 chr2R 16713057 16713063 chr2R 16713185 16713197 4 132 0.0 6.0 3.0 1.0 140 chr2R 16713057 intron CG30463 - chr2R 16713127 intron CG30463 - chr2R 16713197 intron CG30463 - chr2R_4_16710001 chr2R_16710001 RAL-409_125b 1044 chr2R 16714449 16714489 chr2R 16714601 16714641 5 152 6.0 5.0 5.5 0.8 192 chr2R 16714449 intron CG30463 - chr2R 16714545 intron CG30463 - chr2R 16714641 intron CG30463 - chr2R_5_16710001 chr2R_16710001 RAL-409_125b 1045 chr2R 16726635 16726688 chr2R 16726784 16726837 12 147 3.0 6.0 4.5 2.2 202 chr2R 16726635 intron CG30463 - chr2R 16726736 intron CG30463 - chr2R 16726837 intron CG30463 - chr2R_12_16725001 chr2R_16725001 RAL-409_125b 1046 chr2R 16727924 16727976 chr2R 16728050 16728101 14 119 5.0 10.5 7.8 1.6 177 chr2R 16727924 intron CG30463 - chr2R 16728012 intron CG30463 - chr2R 16728101 intron CG30463 - chr2R_14_16725001 chr2R_16725001 RAL-409_125b 1047 chr2R 16730349 16730420 chr2R 16730501 16730532 6 144 0.0 4.0 2.0 2.0 183 chr2R 16730349 intron CG30463 - chr2R 16730440 intron CG30463 - chr2R 16730532 intron CG30463 - chr2R_6_16730001 chr2R_16730001 RAL-409_125b 1048 chr2R 16775604 16775673 chr2R 16775918 16775990 21 314 3.0 3.5 3.2 5.0 386 chr2R 16775604 3` UTR Arp53D + chr2R 16775797 intergenic Arp53D + chr2R 16775990 intergenic Arp53D + chr2R_21_16775001 chr2R_16775001 RAL-409_125b 1049 chr2R 16798996 16799062 chr2R 16799126 16799187 6 128 6.5 1.5 4.0 1.2 191 chr2R 16798996 intergenic not near genes chr2R 16799092 intergenic not near genes chr2R 16799187 intergenic not near genes chr2R_6_16795001 chr2R_16795001 RAL-409_125b 1050 chr2R 16870726 16870768 chr2R 16870919 16870961 10 189 7.0 4.0 5.5 1.5 235 chr2R 16870726 intron CG6426 + chr2R 16870844 intron CG6426 + chr2R 16870961 intron CG6426 + chr2R_10_16870001 chr2R_16870001 RAL-409_125b 1051 chr2R 16904771 16904814 chr2R 16904917 16904951 13 144 6.5 3.5 5.0 2.2 180 chr2R 16904771 intergenic not near genes chr2R 16904861 intergenic not near genes chr2R 16904951 intergenic not near genes chr2R_13_16900001 chr2R_16900001 RAL-409_125b 1052 chr2R 16912647 16912714 chr2R 16912834 16912896 16 190 7.0 4.5 5.8 2.4 249 chr2R 16912647 intergenic not near genes chr2R 16912772 intergenic not near genes chr2R 16912896 intergenic not near genes chr2R_16_16910001 chr2R_16910001 RAL-409_125b 1053 chr2R 16982062 16982096 chr2R 16982190 16982224 8 127 1.0 9.0 5.0 1.3 162 chr2R 16982062 intron Cbp53E + chr2R 16982143 intron Cbp53E + chr2R 16982224 intron Cbp53E + chr2R_8_16980001 chr2R_16980001 RAL-409_125b 1054 chr2R 16983327 16983378 chr2R 16983463 16983514 7 134 4.0 1.0 2.5 2.0 187 chr2R 16983327 intron Cbp53E + chr2R 16983420 intron Cbp53E + chr2R 16983514 intron Cbp53E + chr2R_7_16980001 chr2R_16980001 RAL-409_125b 1055 chr2R 17048581 17048651 chr2R 17048710 17048780 12 128 6.5 8.5 7.5 1.4 199 chr2R 17048581 3` UTR CG9642 + chr2R 17048680 3` UTR CG9642 + chr2R 17048780 3` UTR CG9642 + chr2R_12_17045001 chr2R_17045001 RAL-409_125b 1056 chr2R 17105144 17105223 chr2R 17112288 17112359 16 7146 29.0 36.0 32.5 0.5 7215 chr2R 17105144 intron CG30456 + chr2R 17108752 intergenic CG15611 + chr2R 17112359 intron CG15611 + chr2R_16_17105001 chr2R_17105001 RAL-409_125b 1057 chr2R 17132820 17132863 chr2R 17132964 17133012 8 145 7.0 2.0 4.5 1.5 192 chr2R 17132820 intergenic not near genes chr2R 17132916 intergenic not near genes chr2R 17133012 intergenic Acp54A1 + chr2R_8_17130001 chr2R_17130001 RAL-409_125b 1058 chr2R 17147210 17147254 chr2R 17152280 17152327 jockey 5 5076 8.0 6.0 7.0 0.6 5117 chr2R 17147210 intergenic not near genes chr2R 17149768 intergenic not near genes chr2R 17152327 intergenic not near genes chr2R_5_17145001 chr2R_17145001 RAL-409_125b 1059 chr2R 17214641 17214683 chr2R 17214781 17214827 9 148 9.0 11.0 10.0 0.8 186 chr2R 17214641 intergenic not near genes chr2R 17214734 intergenic not near genes chr2R 17214827 intergenic not near genes chr2R_9_17210001 chr2R_17210001 RAL-409_125b 1060 chr2R 17221871 17221928 chr2R 17222113 17222153 9 229 8.0 5.5 6.8 1.2 282 chr2R 17221871 intron mbl + chr2R 17222012 intron mbl + chr2R 17222153 intron mbl + chr2R_9_17220001 chr2R_17220001 RAL-409_125b 1061 chr2R 17227571 17227596 chr2R 17227754 17227774 6 182 2.5 3.5 3.0 1.5 203 chr2R 17227571 intron mbl + chr2R 17227672 intron mbl + chr2R 17227774 intron mbl + chr2R_6_17225001 chr2R_17225001 RAL-409_125b 1062 chr2R 17232749 17232823 chr2R 17232887 17232927 10 117 6.5 10.0 8.2 1.1 178 chr2R 17232749 intron mbl + chr2R 17232838 intron mbl + chr2R 17232927 intron mbl + chr2R_10_17230001 chr2R_17230001 RAL-409_125b 1063 chr2R 17236480 17236525 chr2R 17241734 17241773 copia 12 5248 5.0 7.0 6.0 1.7 5293 chr2R 17236480 intron mbl + chr2R 17239126 intron mbl + chr2R 17241773 intron mbl + chr2R_12_17235001 chr2R_17235001 RAL-409_125b 1064 chr2R 17263227 17263285 chr2R 17263356 17263415 6 128 4.5 5.0 4.8 1.0 188 chr2R 17263227 intron mbl + chr2R 17263321 intron mbl + chr2R 17263415 intron mbl + chr2R_6_17260001 chr2R_17260001 RAL-409_125b 1065 chr2R 17322801 17322827 chr2R 17322937 17322956 8 134 4.5 5.0 4.8 1.4 155 chr2R 17322801 intron mbl + chr2R 17322878 intron mbl + chr2R 17322956 intron mbl + chr2R_8_17320001 chr2R_17320001 RAL-409_125b 1066 chr2R 17335676 17335725 chr2R 17335830 17335879 13 150 0.5 9.0 4.8 2.2 203 chr2R 17335676 intron mbl + chr2R 17335778 intron mbl + chr2R 17335879 intron mbl + chr2R_13_17335001 chr2R_17335001 RAL-409_125b 1067 chr2R 17381564 17381613 chr2R 17381675 17381686 11 120 5.5 6.0 5.8 1.6 122 chr2R 17381564 intergenic not near genes chr2R 17381625 intergenic not near genes chr2R 17381686 intergenic not near genes chr2R_11_17380001 chr2R_17380001 RAL-409_125b 1068 chr2R 17384469 17384543 chr2R 17384603 17384677 17 132 6.0 8.0 7.0 2.1 208 chr2R 17384469 intergenic not near genes chr2R 17384573 intergenic not near genes chr2R 17384677 intergenic not near genes chr2R_17_17380001 chr2R_17380001 RAL-409_125b 1069 chr2R 17395241 17395276 chr2R 17395369 17395404 12 125 14.0 9.0 11.5 1.0 163 chr2R 17395241 intron Sip1 + chr2R 17395322 intron Sip1 + chr2R 17395404 intron Sip1 + chr2R_12_17395001 chr2R_17395001 RAL-409_125b 1070 chr2R 17395278 17395308 chr2R 17395365 17395436 7 119 8.0 8.0 8.0 0.8 158 chr2R 17395278 intron Sip1 + chr2R 17395357 intron Sip1 + chr2R 17395436 intron Sip1 + chr2R_7_17395001 chr2R_17395001 RAL-409_125b 1071 chr2R 17465069 17465127 chr2R 17465200 17465258 16 131 8.5 6.0 7.2 2.0 189 chr2R 17465069 3` UTR CG14478 + chr2R 17465164 3` UTR CG14478 + chr2R 17465258 3` UTR CG14478 + chr2R_16_17465001 chr2R_17465001 RAL-409_125b 1072 chr2R 17485305 17485342 chr2R 17485457 17485494 9 150 3.5 8.5 6.0 1.3 189 chr2R 17485305 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17485400 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17485494 5` UTR,intron CG43110 -,NT5E-2 + chr2R_9_17485001 chr2R_17485001 RAL-409_125b 1073 chr2R 17485871 17485933 chr2R 17490683 17490743 F-element 17 4810 6.0 7.5 6.8 2.2 4872 chr2R 17485871 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488307 intron NT5E-2 + chr2R 17490743 intron NT5E-2 + chr2R_17_17485001 chr2R_17485001 RAL-409_125b 1074 chr2R 17493104 17493164 chr2R 17493235 17493295 9 131 5.0 5.0 5.0 1.5 191 chr2R 17493104 3` UTR NT5E-2 + chr2R 17493200 intergenic NT5E-2 +,CG30103 + chr2R 17493295 intergenic NT5E-2 +,CG30103 + chr2R_9_17490001 chr2R_17490001 RAL-409_125b 1075 chr2R 17500610 17500681 chr2R 17500736 17500797 4 124 3.5 4.0 3.8 0.8 187 chr2R 17500610 intergenic not near genes chr2R 17500704 intergenic not near genes chr2R 17500797 intergenic not near genes chr2R_4_17500001 chr2R_17500001 RAL-409_125b 1076 chr2R 17511980 17512051 chr2R 17512141 17512181 20 148 10.0 8.0 9.0 2.0 201 chr2R 17511980 intron CG4847 + chr2R 17512080 intron CG4847 + chr2R 17512181 intron CG4847 + chr2R_20_17510001 chr2R_17510001 RAL-409_125b 1077 chr2R 17697156 17697192 chr2R 17697284 17697314 11 126 6.0 8.0 7.0 1.4 158 chr2R 17697156 intron rdgBbeta - chr2R 17697235 intron rdgBbeta - chr2R 17697314 intron rdgBbeta - chr2R_11_17695001 chr2R_17695001 RAL-409_125b 1078 chr2R 17708218 17708393 chr2R 17708445 17708524 11 213 5.0 7.0 6.0 1.6 306 chr2R 17708218 intron CG6424 - chr2R 17708371 intron CG6424 - chr2R 17708524 intron CG6424 - chr2R_11_17705001 chr2R_17705001 RAL-409_125b 1079 chr2R 17782324 17782374 chr2R 17783577 17783627 pogo 8 1253 8.0 4.0 6.0 1.1 1303 chr2R 17782324 intergenic CG33981 -,fab1 - chr2R 17782976 intergenic not near genes chr2R 17783627 intergenic mir-31a - chr2R_8_17780001 chr2R_17780001 RAL-409_125b 1080 chr2R 17784017 17784055 chr2R 17784288 17784340 pogo 12 281 3.5 12.0 7.8 1.4 323 chr2R 17784017 intergenic mir-31a - chr2R 17784178 intergenic mir-31a - chr2R 17784340 intergenic mir-31a - chr2R_12_17780001 chr2R_17780001 RAL-409_125b 1081 chr2R 17812779 17812802 chr2R 17812902 17812930 7 126 7.0 5.5 6.2 1.0 151 chr2R 17812779 intron grh + chr2R 17812854 intron grh + chr2R 17812930 intron grh + chr2R_7_17810001 chr2R_17810001 RAL-409_125b 1082 chr2R 17821688 17821742 chr2R 17821820 17821874 7 131 5.5 8.0 6.8 0.9 186 chr2R 17821688 intron grh + chr2R 17821781 intron grh + chr2R 17821874 intron grh + chr2R_7_17820001 chr2R_17820001 RAL-409_125b 1083 chr2R 17907995 17908038 chr2R 17908121 17908163 6 126 8.5 8.5 8.5 0.6 168 chr2R 17907995 intron Elk + chr2R 17908079 intron Elk + chr2R 17908163 intron Elk + chr2R_6_17905001 chr2R_17905001 RAL-409_125b 1084 chr2R 17928242 17928300 chr2R 17928370 17928439 9 137 5.0 9.0 7.0 1.1 197 chr2R 17928242 intergenic not near genes chr2R 17928340 intergenic not near genes chr2R 17928439 intergenic not near genes chr2R_9_17925001 chr2R_17925001 RAL-409_125b 1085 chr2R 17935258 17935328 chr2R 17935495 17935529 9 230 2.0 3.5 2.8 2.4 271 chr2R 17935258 intergenic not near genes chr2R 17935394 intergenic not near genes chr2R 17935529 intergenic not near genes chr2R_9_17935001 chr2R_17935001 RAL-409_125b 1086 chr2R 17963288 17963292 chr2R 17963471 17963475 4 183 9.5 6.5 8.0 0.4 187 chr2R 17963288 intergenic not near genes chr2R 17963382 intergenic not near genes chr2R 17963475 intergenic not near genes chr2R_4_17960001 chr2R_17960001 RAL-409_125b 1087 chr2R 17982874 17982935 chr2R 17983009 17983068 14 126 8.5 5.0 6.8 1.8 194 chr2R 17982874 intron dpr13 - chr2R 17982971 intron dpr13 - chr2R 17983068 intron dpr13 - chr2R_14_17980001 chr2R_17980001 RAL-409_125b 1088 chr2R 17997126 17997173 chr2R 17997257 17997305 15 125 10.5 6.5 8.5 1.6 179 chr2R 17997126 intron dpr13 - chr2R 17997216 intron dpr13 - chr2R 17997305 intron dpr13 - chr2R_15_17995001 chr2R_17995001 RAL-409_125b 1089 chr2R 18031660 18031703 chr2R 18031802 18031820 4 134 0.0 1.0 0.5 2.7 160 chr2R 18031660 intergenic not near genes chr2R 18031740 intergenic not near genes chr2R 18031820 intergenic not near genes chr2R_4_18030001 chr2R_18030001 RAL-409_125b 1090 chr2R 18035667 18035679 chr2R 18035798 18035809 6 130 10.0 6.5 8.2 0.7 142 chr2R 18035667 intergenic not near genes chr2R 18035738 intergenic not near genes chr2R 18035809 intergenic not near genes chr2R_6_18035001 chr2R_18035001 RAL-409_125b 1091 chr2R 18035681 18035741 chr2R 18035796 18035837 13 120 4.5 6.5 5.5 2.0 156 chr2R 18035681 intergenic not near genes chr2R 18035759 intergenic not near genes chr2R 18035837 intergenic not near genes chr2R_13_18035001 chr2R_18035001 RAL-409_125b 1092 chr2R 18074565 18074610 chr2R 18074679 18074731 10 123 4.0 7.5 5.8 1.5 166 chr2R 18074565 intron CG34386 + chr2R 18074648 intron CG34386 + chr2R 18074731 intron CG34386 + chr2R_10_18070001 chr2R_18070001 RAL-409_125b 1093 chr2R 18111634 18111672 chr2R 18115549 18115590 F-element 4 3917 9.5 0.5 5.0 0.7 3956 chr2R 18111634 intergenic not near genes chr2R 18113612 intergenic not near genes chr2R 18115590 intergenic not near genes chr2R_4_18110001 chr2R_18110001 RAL-409_125b 1094 chr2R 18195175 18195222 chr2R 18195313 18195325 4 124 1.0 8.5 4.8 0.7 150 chr2R 18195175 intergenic not near genes chr2R 18195250 intergenic not near genes chr2R 18195325 intergenic not near genes chr2R_4_18195001 chr2R_18195001 RAL-409_125b 1095 chr2R 18312329 18312340 chr2R 18312479 18312490 4 147 6.5 3.5 5.0 0.7 161 chr2R 18312329 intron sbb - chr2R 18312410 intron sbb - chr2R 18312490 intron sbb - chr2R_4_18310001 chr2R_18310001 RAL-409_125b 1096 chr2R 18312352 18312392 chr2R 18312467 18312541 9 142 4.0 2.5 3.2 2.1 189 chr2R 18312352 intron sbb - chr2R 18312446 intron sbb - chr2R 18312541 intron sbb - chr2R_9_18310001 chr2R_18310001 RAL-409_125b 1097 chr2R 18317209 18317263 chr2R 18317337 18317397 13 130 6.0 6.5 6.2 1.8 188 chr2R 18317209 intron sbb - chr2R 18317303 intron sbb - chr2R 18317397 intron sbb - chr2R_13_18315001 chr2R_18315001 RAL-409_125b 1098 chr2R 18320595 18320603 chr2R 18320765 18320776 5 172 11.5 5.0 8.2 0.5 181 chr2R 18320595 intron sbb - chr2R 18320686 intron sbb - chr2R 18320776 intron sbb - chr2R_5_18320001 chr2R_18320001 RAL-409_125b 1099 chr2R 18358380 18358403 chr2R 18372643 18372666 roo 5 14262 2.0 11.0 6.5 0.7 14286 chr2R 18358380 intergenic not near genes chr2R 18365523 intergenic not near genes chr2R 18372666 intergenic not near genes chr2R_5_18365001 chr2R_18365001 RAL-409_125b 1100 chr2R 18374722 18374784 chr2R 18374838 18374875 5 102 0.5 2.5 1.5 2.0 153 chr2R 18374722 intergenic not near genes chr2R 18374798 intergenic not near genes chr2R 18374875 intergenic not near genes chr2R_5_18370001 chr2R_18370001 RAL-409_125b 1101 chr2R 18376693 18376755 chr2R 18376833 18376895 10 138 4.0 5.5 4.8 1.7 202 chr2R 18376693 intergenic not near genes chr2R 18376794 intergenic not near genes chr2R 18376895 intergenic not near genes chr2R_10_18375001 chr2R_18375001 RAL-409_125b 1102 chr2R 18393838 18393902 chr2R 18394045 18394111 15 203 9.0 4.5 6.8 1.9 273 chr2R 18393838 intron Idgf5 + chr2R 18393974 exon Idgf5 + chr2R 18394111 exon Idgf5 + chr2R_15_18390001 chr2R_18390001 RAL-409_125b 1103 chr2R 18396071 18396107 chr2R 18396203 18396225 6 129 2.0 8.0 5.0 1.0 154 chr2R 18396071 intergenic not near genes chr2R 18396148 intergenic GstE10 - chr2R 18396225 intergenic GstE10 - chr2R_6_18395001 chr2R_18395001 RAL-409_125b 1104 chr2R 18405708 18405787 chr2R 18405834 18405907 8 127 4.5 1.0 2.8 2.1 199 chr2R 18405708 intergenic GstE6 +,GstE5 + chr2R 18405808 intergenic GstE6 +,GstE5 + chr2R 18405907 intergenic GstE6 + chr2R_8_18405001 chr2R_18405001 RAL-409_125b 1105 chr2R 18413993 18414059 chr2R 18414122 18414179 13 128 7.5 9.5 8.5 1.4 186 chr2R 18413993 intron Dp1 + chr2R 18414086 intron Dp1 + chr2R 18414179 intron Dp1 + chr2R_13_18410001 chr2R_18410001 RAL-409_125b 1106 chr2R 18414615 18414677 chr2R 18414761 18414828 15 148 5.0 8.0 6.5 2.0 213 chr2R 18414615 intron Dp1 + chr2R 18414722 intron Dp1 + chr2R 18414828 intron Dp1 + chr2R_15_18410001 chr2R_18410001 RAL-409_125b 1107 chr2R 18482985 18483039 chr2R 18483268 18483323 17 283 7.0 7.0 7.0 2.1 338 chr2R 18482985 intron CG30116 - chr2R 18483154 intron CG30116 - chr2R 18483323 intron CG30116 - chr2R_17_18480001 chr2R_18480001 RAL-409_125b 1108 chr2R 18487788 18487828 chr2R 18495289 18495314 blood 12 7498 2.5 3.5 3.0 3.0 7526 chr2R 18487788 intron CG30116 - chr2R 18491551 intron CG30116 - chr2R 18495314 intron CG30116 - chr2R_12_18490001 chr2R_18490001 RAL-409_125b 1109 chr2R 18526541 18526609 chr2R 18526673 18526709 18 123 7.5 5.0 6.2 2.5 168 chr2R 18526541 intergenic CG43066 + chr2R 18526625 intergenic CG43066 + chr2R 18526709 intergenic CG43066 + chr2R_18_18525001 chr2R_18525001 RAL-409_125b 1110 chr2R 18524115 18524172 chr2R 18526753 18526806 9 2632 34.5 19.0 26.8 0.3 2691 chr2R 18524115 intron CG43066 + chr2R 18525460 3` UTR CG43066 + chr2R 18526806 intergenic CG43066 + chr2R_9_18525001 chr2R_18525001 RAL-409_125b 1111 chr2R 18575758 18575791 chr2R 18581989 18582029 3S18 6 6233 9.5 6.5 8.0 0.7 6271 chr2R 18575758 intron GEFmeso - chr2R 18578894 intron GEFmeso - chr2R 18582029 intron GEFmeso - chr2R_6_18575001 chr2R_18575001 RAL-409_125b 1112 chr2R 18575808 18575810 chr2R 18581985 18582048 3S18 5 6205 8.0 6.0 7.0 0.6 6240 chr2R 18575808 intron GEFmeso - chr2R 18578928 intron GEFmeso - chr2R 18582048 intron GEFmeso - chr2R_5_18575001 chr2R_18575001 RAL-409_125b 1113 chr2R 18575811 18575816 chr2R 18581984 18582024 3S18 6 6200 6.5 6.0 6.2 0.8 6213 chr2R 18575811 intron GEFmeso - chr2R 18578918 intron GEFmeso - chr2R 18582024 intron GEFmeso - chr2R_6_18575001 chr2R_18575001 RAL-409_125b 1114 chr2R 18590819 18590894 chr2R 18600021 18600076 roo 13 9190 4.5 7.0 5.8 1.9 9257 chr2R 18590819 intron GEFmeso - chr2R 18595448 intron GEFmeso - chr2R 18600076 intron GEFmeso - chr2R_13_18595001 chr2R_18595001 RAL-409_125b 1115 chr2R 18618945 18619014 chr2R 18619090 18619151 16 144 9.5 4.5 7.0 2.0 206 chr2R 18618945 intron CG5493 - chr2R 18619048 intron CG5493 - chr2R 18619151 intron CG5493 - chr2R_16_18615001 chr2R_18615001 RAL-409_125b 1116 chr2R 18620397 18620422 chr2R 18620530 18620560 4 135 14.5 6.0 10.2 0.4 163 chr2R 18620397 intergenic Atg7 - chr2R 18620478 3` UTR Atg7 - chr2R 18620560 3` UTR Atg7 - chr2R_4_18620001 chr2R_18620001 RAL-409_125b 1117 chr2R 18646380 18646434 chr2R 18646572 18646629 12 190 6.0 5.5 5.8 1.8 249 chr2R 18646380 intron SP2637 - chr2R 18646504 intron SP2637 - chr2R 18646629 intron SP2637 - chr2R_12_18645001 chr2R_18645001 RAL-409_125b 1118 chr2R 18736746 18736781 chr2R 18736921 18736956 11 170 6.5 8.5 7.5 1.3 210 chr2R 18736746 intron Hs3st-A + chr2R 18736851 intron Hs3st-A + chr2R 18736956 intron Hs3st-A + chr2R_11_18735001 chr2R_18735001 RAL-409_125b 1119 chr2R 18738167 18738228 chr2R 18738293 18738354 11 125 3.5 3.0 3.2 2.6 187 chr2R 18738167 intron Hs3st-A + chr2R 18738260 intron Hs3st-A + chr2R 18738354 intron Hs3st-A + chr2R_11_18735001 chr2R_18735001 RAL-409_125b 1120 chr2R 18769598 18769735 chr2R 18769755 18769969 8 281 2.0 1.5 1.8 2.9 371 chr2R 18769598 intron Mctp + chr2R 18769784 intron Mctp + chr2R 18769969 intron Mctp + chr2R_8_18765001 chr2R_18765001 RAL-409_125b 1121 chr2R 18778561 18778604 chr2R 18778709 18778732 14 145 7.5 3.0 5.2 2.3 171 chr2R 18778561 intergenic not near genes chr2R 18778646 intergenic not near genes chr2R 18778732 intergenic not near genes chr2R_14_18775001 chr2R_18775001 RAL-409_125b 1122 chr2R 18862267 18862348 chr2R 18862400 18862517 4 160 1.0 0.0 0.5 2.7 250 chr2R 18862267 intergenic Jheh3 - chr2R 18862392 intergenic Jheh3 -,CG43069 + chr2R 18862517 intergenic CG43069 +,Jheh3 - chr2R_4_18860001 chr2R_18860001 RAL-409_125b 1123 chr2R 18924221 18924285 chr2R 18924351 18924410 14 128 8.5 8.5 8.5 1.5 189 chr2R 18924221 intron sano + chr2R 18924316 intron sano + chr2R 18924410 intron sano + chr2R_14_18920001 chr2R_18920001 RAL-409_125b 1124 chr2R 18926484 18926520 chr2R 18926621 18926657 8 137 8.0 3.0 5.5 1.2 173 chr2R 18926484 intron sano + chr2R 18926570 intron sano + chr2R 18926657 intron sano + chr2R_8_18925001 chr2R_18925001 RAL-409_125b 1125 chr2R 18948030 18948065 chr2R 18948166 18948195 8 134 5.5 4.5 5.0 1.3 165 chr2R 18948030 intron sano + chr2R 18948112 intron sano + chr2R 18948195 intron sano + chr2R_8_18945001 chr2R_18945001 RAL-409_125b 1126 chr2R 18954804 18954873 chr2R 18954937 18955001 8 132 6.0 5.0 5.5 1.2 197 chr2R 18954804 intron sano + chr2R 18954902 intron sano + chr2R 18955001 5` UTR sano + chr2R_8_18950001 chr2R_18950001 RAL-409_125b 1127 chr2R 18980946 18981011 chr2R 18981188 18981246 11 235 5.5 5.5 5.5 1.7 300 chr2R 18980946 intergenic not near genes chr2R 18981096 intergenic not near genes chr2R 18981246 intergenic not near genes chr2R_11_18980001 chr2R_18980001 RAL-409_125b 1128 chr2R 18984046 18984094 chr2R 18984178 18984221 6 128 8.0 3.5 5.8 0.9 175 chr2R 18984046 intergenic not near genes chr2R 18984134 intergenic not near genes chr2R 18984221 intergenic not near genes chr2R_6_18980001 chr2R_18980001 RAL-409_125b 1129 chr2R 18988976 18989021 chr2R 18989104 18989149 9 126 1.5 3.0 2.2 2.8 173 chr2R 18988976 intron tn + chr2R 18989062 intron tn + chr2R 18989149 intron tn + chr2R_9_18985001 chr2R_18985001 RAL-409_125b 1130 chr2R 19015392 19015411 chr2R 19015530 19015543 7 136 9.5 6.0 7.8 0.8 151 chr2R 19015392 intergenic not near genes chr2R 19015468 intergenic not near genes chr2R 19015543 intergenic not near genes chr2R_7_19015001 chr2R_19015001 RAL-409_125b 1131 chr2R 19015417 19015457 chr2R 19015528 19015575 15 124 7.5 6.0 6.8 1.9 158 chr2R 19015417 intergenic not near genes chr2R 19015496 intergenic not near genes chr2R 19015575 intergenic not near genes chr2R_15_19015001 chr2R_19015001 RAL-409_125b 1132 chr2R 19025313 19025323 chr2R 19025559 19025595 4 261 17.0 16.0 16.5 0.2 282 chr2R 19025313 intron 5-HT1B - chr2R 19025454 intron 5-HT1B - chr2R 19025595 intron 5-HT1B - chr2R_4_19025001 chr2R_19025001 RAL-409_125b 1133 chr2R 19026001 19026050 chr2R 19026152 19026201 13 153 5.0 5.0 5.0 2.2 200 chr2R 19026001 exon 5-HT1B - chr2R 19026101 intron 5-HT1B - chr2R 19026201 intron 5-HT1B - chr2R_13_19025001 chr2R_19025001 RAL-409_125b 1134 chr2R 19069899 19069933 chr2R 19070012 19070065 7 126 3.0 4.0 3.5 1.6 166 chr2R 19069899 intron 5-HT1A + chr2R 19069982 intron 5-HT1A + chr2R 19070065 intron 5-HT1A + chr2R_7_19065001 chr2R_19065001 RAL-409_125b 1135 chr2R 19247406 19247454 chr2R 19247566 19247612 5 159 7.0 1.0 4.0 1.0 206 chr2R 19247406 intergenic not near genes chr2R 19247509 intergenic not near genes chr2R 19247612 intergenic not near genes chr2R_5_19245001 chr2R_19245001 RAL-409_125b 1136 chr2R 19251310 19251376 chr2R 19251457 19251518 17 144 7.5 8.5 8.0 1.9 208 chr2R 19251310 exon CG33454 - chr2R 19251414 exon CG33454 - chr2R 19251518 exon CG33454 - chr2R_17_19250001 chr2R_19250001 RAL-409_125b 1137 chr2R 19253048 19253112 chr2R 19253188 19253252 21 139 5.5 5.5 5.5 3.2 204 chr2R 19253048 exon CG33453 - chr2R 19253150 exon CG33453 - chr2R 19253252 intergenic CG33453 - chr2R_21_19250001 chr2R_19250001 RAL-409_125b 1138 chr2R 19284398 19284431 chr2R 19284529 19284556 6 124 10.0 5.5 7.8 0.7 158 chr2R 19284398 intergenic CG10476 -,CG11906 - chr2R 19284477 intergenic CG10476 - chr2R 19284556 exon CG10476 - chr2R_6_19280001 chr2R_19280001 RAL-409_125b 1139 chr2R 19295679 19295698 chr2R 19295810 19295829 4 130 10.0 3.5 6.8 0.5 150 chr2R 19295679 intron Tab2 + chr2R 19295754 intron Tab2 + chr2R 19295829 intron Tab2 + chr2R_4_19295001 chr2R_19295001 RAL-409_125b 1140 chr2R 19295699 19295719 chr2R 19295804 19295845 7 125 7.0 4.0 5.5 1.1 146 chr2R 19295699 intron Tab2 + chr2R 19295772 intron Tab2 + chr2R 19295845 intron Tab2 + chr2R_7_19295001 chr2R_19295001 RAL-409_125b 1141 chr2R 19358985 19359065 chr2R 19359118 19359185 12 127 3.5 5.5 4.5 2.2 200 chr2R 19358985 intron CG11961 + chr2R 19359085 intron CG11961 + chr2R 19359185 exon CG11961 + chr2R_12_19355001 chr2R_19355001 RAL-409_125b 1142 chr2R 19363206 19363216 chr2R 19363332 19363342 5 126 4.5 8.5 6.5 0.7 136 chr2R 19363206 intergenic CG10051 + chr2R 19363274 intergenic CG10051 + chr2R 19363342 intergenic CG10051 + chr2R_5_19360001 chr2R_19360001 RAL-409_125b 1143 chr2R 19514357 19514437 chr2R 19514491 19514497 21 126 7.5 7.0 7.2 2.6 140 chr2R 19514357 intergenic not near genes chr2R 19514427 intergenic not near genes chr2R 19514497 intergenic not near genes chr2R_21_19510001 chr2R_19510001 RAL-409_125b 1144 chr2R 19535525 19535597 chr2R 19535659 19535721 18 130 2.5 6.0 4.2 3.5 196 chr2R 19535525 intron sm - chr2R 19535623 intron sm - chr2R 19535721 intron sm - chr2R_18_19535001 chr2R_19535001 RAL-409_125b 1145 chr2R 19570106 19570161 chr2R 19570224 19570291 14 122 4.5 4.5 4.5 2.5 185 chr2R 19570106 intron sm - chr2R 19570198 intron sm - chr2R 19570291 intron sm - chr2R_14_19570001 chr2R_19570001 RAL-409_125b 1146 chr2R 19588705 19588776 chr2R 19588832 19588899 11 126 7.0 4.0 5.5 1.7 194 chr2R 19588705 intron sm - chr2R 19588802 intron sm - chr2R 19588899 intron sm - chr2R_11_19585001 chr2R_19585001 RAL-409_125b 1147 chr2R 19603936 19603998 chr2R 19604075 19604132 7 134 4.0 4.0 4.0 1.4 196 chr2R 19603936 intron sm - chr2R 19604034 intron sm - chr2R 19604132 intron sm - chr2R_7_19600001 chr2R_19600001 RAL-409_125b 1148 chr2R 19697906 19697966 chr2R 19698067 19698129 12 158 4.5 10.0 7.2 1.5 223 chr2R 19697906 intron Obp56a + chr2R 19698018 intron Obp56a + chr2R 19698129 exon Obp56a + chr2R_12_19695001 chr2R_19695001 RAL-409_125b 1149 chr2R 19698542 19698608 chr2R 19698672 19698744 12 135 5.0 3.5 4.2 2.3 202 chr2R 19698542 intergenic Obp56a +,Obp56b - chr2R 19698643 intergenic Obp56b -,Obp56a + chr2R 19698744 3` UTR Obp56b - chr2R_12_19695001 chr2R_19695001 RAL-409_125b 1150 chr2R 19701463 19701540 chr2R 19701597 19701668 12 127 8.0 4.0 6.0 1.7 205 chr2R 19701463 intergenic Obp56c - chr2R 19701566 intergenic Obp56c - chr2R 19701668 intergenic not near genes chr2R_12_19700001 chr2R_19700001 RAL-409_125b 1151 chr2R 19715818 19715854 chr2R 19723332 19723351 blood 7 7512 9.0 9.5 9.2 0.7 7533 chr2R 19715818 intergenic not near genes chr2R 19719584 intergenic not near genes chr2R 19723351 intergenic not near genes chr2R_7_19715001 chr2R_19715001 RAL-409_125b 1152 chr2R 19776570 19776613 chr2R 19779943 19779981 jockey 6 3368 3.5 8.0 5.8 0.9 3411 chr2R 19776570 intergenic not near genes chr2R 19778276 intergenic not near genes chr2R 19779981 intergenic not near genes chr2R_6_19775001 chr2R_19775001 RAL-409_125b 1153 chr2R 19801973 19802031 chr2R 19802235 19802293 8 261 4.0 1.0 2.5 2.3 320 chr2R 19801973 intergenic not near genes chr2R 19802133 intergenic not near genes chr2R 19802293 intergenic not near genes chr2R_8_19800001 chr2R_19800001 RAL-409_125b 1154 chr2R 19810646 19810653 chr2R 19810757 19810786 4 121 6.5 4.5 5.5 0.6 140 chr2R 19810646 intergenic not near genes chr2R 19810716 intergenic not near genes chr2R 19810786 intergenic not near genes chr2R_4_19810001 chr2R_19810001 RAL-409_125b 1155 chr2R 19914816 19914870 chr2R 19922263 19922317 mdg1 14 7458 3.5 2.0 2.8 3.7 7501 chr2R 19914816 intergenic not near genes chr2R 19918566 intergenic not near genes chr2R 19922317 intergenic not near genes chr2R_14_19915001 chr2R_19915001 RAL-409_125b 1156 chr2R 19957420 19957449 chr2R 19962646 19962684 copia 8 5237 5.0 5.5 5.2 1.3 5264 chr2R 19957420 intergenic CG44623 + chr2R 19960052 intergenic not near genes chr2R 19962684 intergenic not near genes chr2R_8_19960001 chr2R_19960001 RAL-409_125b 1157 chr2R 19967779 19967841 chr2R 19967920 19967937 6 134 6.0 5.0 5.5 0.9 158 chr2R 19967779 intergenic not near genes chr2R 19967858 intergenic not near genes chr2R 19967937 intergenic not near genes chr2R_6_19965001 chr2R_19965001 RAL-409_125b 1158 chr2R 19987782 19987832 chr2R 19987914 19987964 12 127 4.5 6.5 5.5 1.8 182 chr2R 19987782 intergenic not near genes chr2R 19987873 intergenic not near genes chr2R 19987964 intergenic not near genes chr2R_12_19985001 chr2R_19985001 RAL-409_125b 1159 chr2R 20006216 20006281 chr2R 20006340 20006394 18 126 6.0 7.5 6.8 2.3 178 chr2R 20006216 intergenic not near genes chr2R 20006305 intergenic not near genes chr2R 20006394 intergenic not near genes chr2R_18_20005001 chr2R_20005001 RAL-409_125b 1160 chr2R 20069210 20069242 chr2R 20071883 20071922 opus 6 2678 3.5 2.0 2.8 1.6 2712 chr2R 20069210 intergenic not near genes chr2R 20070566 intergenic not near genes chr2R 20071922 intergenic not near genes chr2R_6_20070001 chr2R_20070001 RAL-409_125b 1161 chr2R 20087968 20087973 chr2R 20088125 20088125 4 156 12.0 9.5 10.8 0.3 157 chr2R 20087968 intergenic not near genes chr2R 20088046 intergenic not near genes chr2R 20088125 intergenic not near genes chr2R_4_20085001 chr2R_20085001 RAL-409_125b 1162 chr2R 20087993 20088011 chr2R 20088111 20088169 1360 4 148 4.0 5.5 4.8 0.7 176 chr2R 20087993 intergenic not near genes chr2R 20088081 intergenic not near genes chr2R 20088169 intergenic not near genes chr2R_4_20085001 chr2R_20085001 RAL-409_125b 1163 chr2R 20159115 20159182 chr2R 20159285 20159345 12 158 6.0 5.0 5.5 1.8 230 chr2R 20159115 intergenic not near genes chr2R 20159230 intergenic not near genes chr2R 20159345 intergenic not near genes chr2R_12_20155001 chr2R_20155001 RAL-409_125b 1164 chr2R 20161842 20161908 chr2R 20161971 20162036 4 129 1.5 3.5 2.5 1.1 194 chr2R 20161842 intergenic not near genes chr2R 20161939 intergenic not near genes chr2R 20162036 intergenic not near genes chr2R_4_20160001 chr2R_20160001 RAL-409_125b 1165 chr2R 20171277 20171319 chr2R 20171434 20171476 4 151 21.0 19.0 20.0 0.2 199 chr2R 20171277 intergenic not near genes chr2R 20171376 intergenic not near genes chr2R 20171476 intergenic not near genes chr2R_4_20170001 chr2R_20170001 RAL-409_125b 1166 chr2R 20187530 20187552 chr2R 20187618 20187628 9 99 5.0 5.5 5.2 1.5 98 chr2R 20187530 intergenic not near genes chr2R 20187579 intergenic not near genes chr2R 20187628 intergenic not near genes chr2R_9_20185001 chr2R_20185001 RAL-409_125b 1167 chr2R 20219842 20219907 chr2R 20219979 20220041 11 133 3.5 3.0 3.2 2.6 199 chr2R 20219842 intergenic not near genes chr2R 20219942 intergenic not near genes chr2R 20220041 intergenic not near genes chr2R_11_20215001 chr2R_20215001 RAL-409_125b 1168 chr2R 20271808 20271868 chr2R 20271938 20272000 21 134 7.0 6.5 6.8 2.7 192 chr2R 20271808 3` UTR CG10444 - chr2R 20271904 3` UTR CG10444 - chr2R 20272000 3` UTR CG10444 - chr2R_21_20270001 chr2R_20270001 RAL-409_125b 1169 chr2R 20301832 20301860 chr2R 20301974 20302017 5 153 3.5 13.5 8.5 0.5 185 chr2R 20301832 intergenic CR44640 + chr2R 20301924 intergenic CR44640 + chr2R 20302017 intergenic CR44640 + chr2R_5_20300001 chr2R_20300001 RAL-409_125b 1170 chr2R 20321199 20321255 chr2R 20321330 20321396 9 138 6.0 4.5 5.2 1.5 197 chr2R 20321199 intron CG8920 + chr2R 20321298 intron CG8920 + chr2R 20321396 intron CG8920 + chr2R_9_20320001 chr2R_20320001 RAL-409_125b 1171 chr2R 20326711 20326793 chr2R 20326838 20326921 8 125 6.5 7.5 7.0 1.0 210 chr2R 20326711 exon MED8 - chr2R 20326816 intergenic MED8 -,CG8929 + chr2R 20326921 intergenic MED8 -,CG8929 + chr2R_8_20325001 chr2R_20325001 RAL-409_125b 1172 chr2R 20336299 20336354 chr2R 20336443 20336485 11 141 9.5 6.0 7.8 1.2 186 chr2R 20336299 intergenic not near genes chr2R 20336392 intergenic not near genes chr2R 20336485 intergenic not near genes chr2R_11_20335001 chr2R_20335001 RAL-409_125b 1173 chr2R 20368476 20368489 chr2R 20377689 20377702 roo 4 9212 10.0 6.5 8.2 0.4 9226 chr2R 20368476 intergenic not near genes chr2R 20373089 intergenic not near genes chr2R 20377702 intergenic not near genes chr2R_4_20370001 chr2R_20370001 RAL-409_125b 1174 chr2R 20395121 20395195 chr2R 20395249 20395317 20 125 2.0 2.0 2.0 6.7 196 chr2R 20395121 intergenic not near genes chr2R 20395219 intergenic not near genes chr2R 20395317 intergenic not near genes chr2R_20_20395001 chr2R_20395001 RAL-409_125b 1175 chr2R 20437761 20437832 chr2R 20437891 20437957 11 124 1.5 6.0 3.8 2.3 196 chr2R 20437761 intron CG12484 + chr2R 20437859 intron CG12484 + chr2R 20437957 intron CG12484 + chr2R_11_20435001 chr2R_20435001 RAL-409_125b 1176 chr2R 20454762 20454828 chr2R 20454887 20454949 12 129 9.5 7.5 8.5 1.3 187 chr2R 20454762 intron CG12484 + chr2R 20454856 intron CG12484 + chr2R 20454949 intron CG12484 + chr2R_12_20450001 chr2R_20450001 RAL-409_125b 1177 chr2R 20468833 20468887 chr2R 20468943 20469012 7 118 2.0 1.0 1.5 2.8 179 chr2R 20468833 exon CG12484 + chr2R 20468922 intron CG12484 + chr2R 20469012 intron CG12484 + chr2R_7_20465001 chr2R_20465001 RAL-409_125b 1178 chr2R 20504914 20504945 chr2R 20505049 20505080 4 135 1.5 7.0 4.2 0.8 166 chr2R 20504914 3` UTR Obp57b + chr2R 20504997 3` UTR Obp57b + chr2R 20505080 3` UTR Obp57b + chr2R_4_20500001 chr2R_20500001 RAL-409_125b 1179 chr2R 20504968 20504980 chr2R 20505037 20505115 5 121 2.0 6.0 4.0 1.0 147 chr2R 20504968 3` UTR Obp57b + chr2R 20505042 3` UTR Obp57b + chr2R 20505115 3` UTR Obp57b + chr2R_5_20505001 chr2R_20505001 RAL-409_125b 1180 chr2R 20555288 20555336 chr2R 20555421 20555478 9 134 0.0 3.5 1.8 3.2 190 chr2R 20555288 intergenic not near genes chr2R 20555383 intergenic not near genes chr2R 20555478 intergenic not near genes chr2R_9_20555001 chr2R_20555001 RAL-409_125b 1181 chr2R 20572526 20572569 chr2R 20572664 20572709 11 139 3.5 7.0 5.2 1.8 183 chr2R 20572526 intron qsm - chr2R 20572618 intron qsm - chr2R 20572709 intron qsm - chr2R_11_20570001 chr2R_20570001 RAL-409_125b 1182 chr2R 20577043 20577079 chr2R 20577175 20577212 14 128 6.0 0.5 3.2 3.3 169 chr2R 20577043 intron qsm - chr2R 20577128 intron qsm - chr2R 20577212 intron qsm - chr2R_14_20575001 chr2R_20575001 RAL-409_125b 1183 chr2R 20578607 20578634 chr2R 20578746 20578773 10 138 4.5 3.0 3.8 2.1 166 chr2R 20578607 intron qsm - chr2R 20578690 intron qsm - chr2R 20578773 intron qsm - chr2R_10_20575001 chr2R_20575001 RAL-409_125b 1184 chr2R 20590627 20590669 chr2R 20590756 20590798 11 128 5.5 6.5 6.0 1.6 171 chr2R 20590627 intron bl + chr2R 20590712 intron bl + chr2R 20590798 intron bl + chr2R_11_20590001 chr2R_20590001 RAL-409_125b 1185 chr2R 20592547 20592598 chr2R 20592660 20592714 13 117 6.0 6.0 6.0 1.9 167 chr2R 20592547 intron bl + chr2R 20592630 intron bl + chr2R 20592714 intron bl + chr2R_13_20590001 chr2R_20590001 RAL-409_125b 1186 chr2R 20690743 20690785 chr2R 20690834 20690878 11 103 6.0 6.0 6.0 1.6 135 chr2R 20690743 intergenic not near genes chr2R 20690810 intergenic not near genes chr2R 20690878 intergenic not near genes chr2R_11_20690001 chr2R_20690001 RAL-409_125b 1187 chr2R 20708524 20708565 chr2R 20708643 20708682 12 118 6.0 6.0 6.0 1.7 158 chr2R 20708524 intron dpr + chr2R 20708603 intron dpr + chr2R 20708682 intron dpr + chr2R_12_20705001 chr2R_20705001 RAL-409_125b 1188 chr2R 20739405 20739466 chr2R 20744217 20744269 F-element 12 4811 3.5 5.0 4.2 2.3 4864 chr2R 20739405 intron dpr + chr2R 20741837 intron dpr + chr2R 20744269 intron dpr + chr2R_12_20740001 chr2R_20740001 RAL-409_125b 1189 chr2R 20767815 20767823 chr2R 20767948 20767955 4 133 5.0 2.5 3.8 0.8 140 chr2R 20767815 5` UTR CR44665 + chr2R 20767885 intergenic CR44665 + chr2R 20767955 intergenic CR44665 + chr2R_4_20765001 chr2R_20765001 RAL-409_125b 1190 chr2R 20783266 20783314 chr2R 20788083 20788135 F-element 9 4821 6.5 4.0 5.2 1.5 4869 chr2R 20783266 intergenic not near genes chr2R 20785700 intergenic not near genes chr2R 20788135 intergenic CG43666 - chr2R_9_20785001 chr2R_20785001 RAL-409_125b 1191 chr2R 20838057 20838079 chr2R 20838180 20838205 8 128 0.5 9.0 4.8 1.4 148 chr2R 20838057 intron CR44667 + chr2R 20838131 intron CR44667 + chr2R 20838205 intron CR44667 + chr2R_8_20835001 chr2R_20835001 RAL-409_125b 1192 chr2R 21040828 21040892 chr2R 21040941 21040974 13 118 8.5 9.5 9.0 1.3 146 chr2R 21040828 intergenic not near genes chr2R 21040901 intergenic not near genes chr2R 21040974 intergenic not near genes chr2R_13_21040001 chr2R_21040001 RAL-409_125b 1193 chr2R 21151106 21151140 chr2R 21153762 21153823 opus 6 2674 0.5 6.0 3.2 1.4 2717 chr2R 21151106 intron CG30389 - chr2R 21152464 intron CG30389 - chr2R 21153823 intron CG30389 - chr2R_6_21150001 chr2R_21150001 RAL-409_125b 1194 chr2R 21158844 21158910 chr2R 21159018 21159079 10 173 10.5 12.0 11.2 0.8 235 chr2R 21158844 intron CG30389 - chr2R 21158962 intron CG30389 - chr2R 21159079 intron CG30389 - chr2R_10_21155001 chr2R_21155001 RAL-409_125b 1195 chr2R 21188173 21188241 chr2R 21188304 21188372 9 129 13.0 5.5 9.2 0.9 199 chr2R 21188173 exon tud + chr2R 21188272 intron tud + chr2R 21188372 intron tud + chr2R_9_21185001 chr2R_21185001 RAL-409_125b 1196 chr2R 21408334 21408370 chr2R 21408471 21408512 5 139 4.0 1.0 2.5 1.4 178 chr2R 21408334 intron Sdc - chr2R 21408423 intron Sdc - chr2R 21408512 intron Sdc - chr2R_5_21405001 chr2R_21405001 RAL-409_125b 1197 chr2R 21532853 21532877 chr2R 21532972 21533005 9 126 3.0 6.5 4.8 1.6 152 chr2R 21532853 intron Egfr + chr2R 21532929 intron Egfr + chr2R 21533005 intron Egfr + chr2R_9_21530001 chr2R_21530001 RAL-409_125b 1198 chr2R 21540639 21540692 chr2R 21540907 21540955 10 266 4.5 3.0 3.8 2.1 316 chr2R 21540639 intron Egfr + chr2R 21540797 intron Egfr + chr2R 21540955 intron Egfr + chr2R_10_21540001 chr2R_21540001 RAL-409_125b 1199 chr2R 21580452 21580484 chr2R 21580585 21580617 8 133 0.0 4.5 2.2 2.5 165 chr2R 21580452 intergenic not near genes chr2R 21580534 intergenic not near genes chr2R 21580617 intergenic not near genes chr2R_8_21580001 chr2R_21580001 RAL-409_125b 1200 chr2R 21592819 21592854 chr2R 21592932 21592955 7 114 8.5 5.5 7.0 0.9 136 chr2R 21592819 intergenic not near genes chr2R 21592887 intergenic not near genes chr2R 21592955 intergenic not near genes chr2R_7_21590001 chr2R_21590001 RAL-409_125b 1201 chr2R 21643878 21643952 chr2R 21644010 21644083 13 130 7.0 6.0 6.5 1.7 205 chr2R 21643878 intergenic not near genes chr2R 21643980 intergenic not near genes chr2R 21644083 intergenic not near genes chr2R_13_21640001 chr2R_21640001 RAL-409_125b 1202 chr2R 21659624 21659687 chr2R 21659905 21659952 7 259 21.5 18.5 20.0 0.3 328 chr2R 21659624 exon Rae1 - chr2R 21659788 exon Rae1 - chr2R 21659952 5` UTR Rae1 - chr2R_7_21655001 chr2R_21655001 RAL-409_125b 1203 chr2R 21671506 21671566 chr2R 21671633 21671689 19 126 7.0 5.0 6.0 2.7 183 chr2R 21671506 3` UTR NC2alpha + chr2R 21671598 intergenic NC2alpha +,CG15676 + chr2R 21671689 intergenic CG15676 +,NC2alpha + chr2R_19_21670001 chr2R_21670001 RAL-409_125b 1204 chr2R 21681138 21681177 chr2R 21681265 21681310 14 131 1.5 1.5 1.5 5.6 172 chr2R 21681138 intron CG30263 + chr2R 21681224 intron CG30263 + chr2R 21681310 intron CG30263 + chr2R_14_21680001 chr2R_21680001 RAL-409_125b 1205 chr2R 21721529 21721604 chr2R 21721665 21721742 12 135 6.0 5.5 5.8 1.8 213 chr2R 21721529 intron LBR + chr2R 21721636 intron LBR + chr2R 21721742 intron LBR + chr2R_12_21720001 chr2R_21720001 RAL-409_125b 1206 chr2R 21725181 21725222 chr2R 21725308 21725349 6 123 0.0 5.5 2.8 1.6 168 chr2R 21725181 intergenic not near genes chr2R 21725265 intergenic not near genes chr2R 21725349 intergenic not near genes chr2R_6_21725001 chr2R_21725001 RAL-409_125b 1207 chr2R 21730249 21730284 chr2R 21730459 21730527 5 229 5.0 7.0 6.0 0.7 278 chr2R 21730249 intergenic not near genes chr2R 21730388 intergenic not near genes chr2R 21730527 intergenic not near genes chr2R_5_21730001 chr2R_21730001 RAL-409_125b 1208 chr2R 21738246 21738306 chr2R 21747437 21747455 roo 4 9187 2.5 5.0 3.8 0.8 9209 chr2R 21738246 intergenic not near genes chr2R 21742850 intergenic not near genes chr2R 21747455 intergenic not near genes chr2R_4_21740001 chr2R_21740001 RAL-409_125b 1209 chr2R 21753050 21753107 chr2R 21753580 21753582 roo 21 528 5.0 6.0 5.5 3.2 532 chr2R 21753050 intergenic not near genes chr2R 21753316 intergenic not near genes chr2R 21753582 intergenic not near genes chr2R_21_21750001 chr2R_21750001 RAL-409_125b 1210 chr2R 21771410 21771470 chr2R 21771678 21771743 15 273 3.0 6.0 4.5 2.7 333 chr2R 21771410 intergenic not near genes chr2R 21771576 intergenic not near genes chr2R 21771743 intergenic not near genes chr2R_15_21770001 chr2R_21770001 RAL-409_125b 1211 chr2R 21789575 21789635 chr2R 21789719 21789796 13 154 7.5 6.5 7.0 1.6 221 chr2R 21789575 intergenic lox2 - chr2R 21789686 3` UTR lox2 - chr2R 21789796 exon lox2 - chr2R_13_21785001 chr2R_21785001 RAL-409_125b 1212 chr2R 21802391 21802449 chr2R 21802520 21802580 5 137 2.0 4.0 3.0 1.2 189 chr2R 21802391 intergenic not near genes chr2R 21802486 intergenic not near genes chr2R 21802580 intergenic not near genes chr2R_5_21800001 chr2R_21800001 RAL-409_125b 1213 chr2R 21809480 21809544 chr2R 21817770 21817834 roo 15 8287 8.0 5.5 6.8 1.9 8354 chr2R 21809480 intergenic not near genes chr2R 21813657 intergenic not near genes chr2R 21817834 intergenic not near genes chr2R_15_21810001 chr2R_21810001 RAL-409_125b 1214 chr2R 21830180 21830241 chr2R 21830309 21830370 15 125 7.0 8.0 7.5 1.8 190 chr2R 21830180 intron CG13492 - chr2R 21830275 intron CG13492 - chr2R 21830370 intron CG13492 - chr2R_15_21830001 chr2R_21830001 RAL-409_125b 1215 chr2R 21857299 21857315 chr2R 21857440 21857456 5 138 13.5 4.0 8.8 0.5 157 chr2R 21857299 intergenic not near genes chr2R 21857378 intergenic not near genes chr2R 21857456 intergenic not near genes chr2R_5_21855001 chr2R_21855001 RAL-409_125b 1216 chr2R 21857329 21857364 chr2R 21857437 21857492 12 130 8.0 2.5 5.2 1.9 163 chr2R 21857329 intergenic not near genes chr2R 21857410 intergenic not near genes chr2R 21857492 intergenic not near genes chr2R_12_21855001 chr2R_21855001 RAL-409_125b 1217 chr2R 21863455 21863520 chr2R 21863595 21863662 12 138 6.0 10.0 8.0 1.3 207 chr2R 21863455 intergenic not near genes chr2R 21863558 intergenic not near genes chr2R 21863662 intergenic not near genes chr2R_12_21860001 chr2R_21860001 RAL-409_125b 1218 chr2R 21880574 21880633 chr2R 21880723 21880781 10 147 5.0 7.5 6.2 1.4 207 chr2R 21880574 intron Fili + chr2R 21880678 intron Fili + chr2R 21880781 intron Fili + chr2R_10_21880001 chr2R_21880001 RAL-409_125b 1219 chr2R 21885504 21885556 chr2R 21885631 21885683 11 123 5.0 9.5 7.2 1.3 179 chr2R 21885504 intron Fili + chr2R 21885594 intron Fili + chr2R 21885683 intron Fili + chr2R_11_21885001 chr2R_21885001 RAL-409_125b 1220 chr2R 21888262 21888321 chr2R 21888403 21888457 8 141 2.0 6.0 4.0 1.6 195 chr2R 21888262 intron Fili + chr2R 21888360 intron Fili + chr2R 21888457 intron Fili + chr2R_8_21885001 chr2R_21885001 RAL-409_125b 1221 chr2R 21903802 21903871 chr2R 21903925 21903963 14 124 4.0 3.0 3.5 3.1 161 chr2R 21903802 intron Fili + chr2R 21903882 intron Fili + chr2R 21903963 intron Fili + chr2R_14_21900001 chr2R_21900001 RAL-409_125b 1222 chr2R 21906225 21906293 chr2R 21906376 21906444 6 151 1.0 0.0 0.5 4.0 219 chr2R 21906225 intron Fili + chr2R 21906334 intron Fili + chr2R 21906444 intron Fili + chr2R_6_21905001 chr2R_21905001 RAL-409_125b 1223 chr2R 21932236 21932275 chr2R 21932328 21932402 14 108 7.0 8.5 7.8 1.6 166 chr2R 21932236 intron Fili + chr2R 21932319 intron Fili + chr2R 21932402 intron Fili + chr2R_14_21930001 chr2R_21930001 RAL-409_125b 1224 chr2R 21963154 21963217 chr2R 21963284 21963342 8 123 6.0 1.0 3.5 1.8 188 chr2R 21963154 intergenic not near genes chr2R 21963248 intergenic not near genes chr2R 21963342 intergenic not near genes chr2R_8_21960001 chr2R_21960001 RAL-409_125b 1225 chr2R 21991192 21991245 chr2R 21991305 21991362 8 105 2.5 6.0 4.2 1.5 170 chr2R 21991192 intron CG34370 - chr2R 21991277 intron CG34370 - chr2R 21991362 intron CG34370 - chr2R_8_21990001 chr2R_21990001 RAL-409_125b 1226 chr2R 22008990 22009072 chr2R 22009129 22009203 7 133 1.5 3.5 2.5 2.0 213 chr2R 22008990 intron CG34370 - chr2R 22009096 intron CG34370 - chr2R 22009203 intron CG34370 - chr2R_7_22005001 chr2R_22005001 RAL-409_125b 1227 chr2R 22029478 22029520 chr2R 22029606 22029643 13 126 6.5 0.0 3.2 3.1 165 chr2R 22029478 intron CG34370 - chr2R 22029560 intron CG34370 - chr2R 22029643 intron CG34370 - chr2R_13_22025001 chr2R_22025001 RAL-409_125b 1228 chr2R 22037748 22037765 chr2R 22037880 22037897 6 132 7.0 1.0 4.0 1.2 149 chr2R 22037748 intron CG34370 - chr2R 22037822 intron CG34370 - chr2R 22037897 intron CG34370 - chr2R_6_22035001 chr2R_22035001 RAL-409_125b 1229 chr2R 22132258 22132282 chr2R 22132388 22132412 5 128 3.0 10.0 6.5 0.7 154 chr2R 22132258 intergenic not near genes chr2R 22132335 intergenic not near genes chr2R 22132412 intergenic not near genes chr2R_5_22130001 chr2R_22130001 RAL-409_125b 1230 chr2R 22135441 22135463 chr2R 22135547 22135622 6 132 8.5 6.5 7.5 0.7 181 chr2R 22135441 intergenic not near genes chr2R 22135532 intergenic not near genes chr2R 22135622 intergenic not near genes chr2R_6_22135001 chr2R_22135001 RAL-409_125b 1231 chr2R 22159151 22159220 chr2R 22159290 22159359 16 137 5.0 3.5 4.2 3.1 208 chr2R 22159151 intron a + chr2R 22159255 intron a + chr2R 22159359 intron a + chr2R_16_22155001 chr2R_22155001 RAL-409_125b 1232 chr2R 22178710 22178773 chr2R 22178847 22178909 8 132 0.0 5.0 2.5 2.3 199 chr2R 22178710 intron CG11170 - chr2R 22178810 intron CG11170 - chr2R 22178909 intron CG11170 - chr2R_8_22175001 chr2R_22175001 RAL-409_125b 1233 chr2R 22247520 22247549 chr2R 22247633 22247662 5 115 5.5 3.5 4.5 0.9 142 chr2R 22247520 intron dve + chr2R 22247591 intron dve + chr2R 22247662 intron dve + chr2R_5_22245001 chr2R_22245001 RAL-409_125b 1234 chr2R 22297711 22297737 chr2R 22297849 22297875 6 137 1.5 6.0 3.8 1.2 164 chr2R 22297711 intergenic not near genes chr2R 22297793 intergenic wdp - chr2R 22297875 intergenic wdp - chr2R_6_22295001 chr2R_22295001 RAL-409_125b 1235 chr2R 22349654 22349719 chr2R 22351482 22351522 jockey 15 1824 6.0 5.5 5.8 2.2 1868 chr2R 22349654 intron Liprin-gamma - chr2R 22350588 intron Liprin-gamma - chr2R 22351522 intron Liprin-gamma - chr2R_15_22350001 chr2R_22350001 RAL-409_125b 1236 chr2R 22374599 22374618 chr2R 22374736 22374749 4 136 8.5 7.5 8.0 0.4 150 chr2R 22374599 3` UTR CR44759 - chr2R 22374674 3` UTR CR44759 - chr2R 22374749 3` UTR CR44759 - chr2R_4_22370001 chr2R_22370001 RAL-409_125b 1237 chr2R 22465280 22465328 chr2R 22465529 22465577 BS 14 248 9.0 8.0 8.5 1.5 297 chr2R 22465280 intron CG10384 + chr2R 22465428 intron CG10384 + chr2R 22465577 intron CG10384 + chr2R_14_22465001 chr2R_22465001 RAL-409_125b 1238 chr2R 22503751 22503805 chr2R 22503898 22503950 7 145 6.5 4.0 5.2 1.1 199 chr2R 22503751 intron px - chr2R 22503850 intron px - chr2R 22503950 intron px - chr2R_7_22500001 chr2R_22500001 RAL-409_125b 1239 chr2R 22506681 22506737 chr2R 22506809 22506859 12 126 6.0 5.5 5.8 1.8 178 chr2R 22506681 intron px - chr2R 22506770 intron px - chr2R 22506859 intron px - chr2R_12_22505001 chr2R_22505001 RAL-409_125b 1240 chr2R 22525711 22525769 chr2R 22529316 22529362 jockey 8 3597 7.0 10.0 8.5 0.8 3651 chr2R 22525711 intron px - chr2R 22527536 intron px - chr2R 22529362 intron px - chr2R_8_22525001 chr2R_22525001 RAL-409_125b 1241 chr2R 22545579 22545635 chr2R 22545708 22545764 8 129 6.0 7.0 6.5 1.1 185 chr2R 22545579 intron px - chr2R 22545672 intron px - chr2R 22545764 intron px - chr2R_8_22545001 chr2R_22545001 RAL-409_125b 1242 chr2R 22580417 22580435 chr2R 22586612 22586627 diver 4 6196 0.0 5.5 2.8 1.1 6210 chr2R 22580417 intron dnr1 - chr2R 22583522 intron dnr1 - chr2R 22586627 intron dnr1 - chr2R_4_22580001 chr2R_22580001 RAL-409_125b 1243 chr2R 22623773 22623805 chr2R 22623911 22623934 8 139 7.5 3.5 5.5 1.2 161 chr2R 22623773 intron CG33143 + chr2R 22623854 intron CG33143 + chr2R 22623934 intron CG33143 + chr2R_8_22620001 chr2R_22620001 RAL-409_125b 1244 chr2R 22774925 22774950 chr2R 22775394 22775405 jockey 5 462 9.5 6.0 7.8 0.6 480 chr2R 22774925 intron CG42260 - chr2R 22775165 intron CG42260 - chr2R 22775405 intron CG42260 - chr2R_5_22775001 chr2R_22775001 RAL-409_125b 1245 chr2R 22774951 22774987 chr2R 22775388 22775456 jockey 9 460 5.5 5.0 5.2 1.5 505 chr2R 22774951 intron CG42260 - chr2R 22775204 intron CG42260 - chr2R 22775456 intron CG42260 - chr2R_9_22775001 chr2R_22775001 RAL-409_125b 1246 chr2R 22839448 22839526 chr2R 22839572 22839660 12 130 6.5 2.5 4.5 2.2 212 chr2R 22839448 intergenic CG9825 + chr2R 22839554 intergenic CG9825 + chr2R 22839660 intergenic CG9825 + chr2R_12_22835001 chr2R_22835001 RAL-409_125b 1247 chr2R 22843024 22843045 chr2R 22845040 22845061 flea 5 2015 4.0 9.0 6.5 0.7 2037 chr2R 22843024 intergenic CG9826 + chr2R 22844042 intergenic not near genes chr2R 22845061 intergenic not near genes chr2R_5_22840001 chr2R_22840001 RAL-409_125b 1248 chr2R 22873611 22873661 chr2R 22873737 22873787 9 124 7.5 8.5 8.0 1.0 176 chr2R 22873611 exon CG13532 + chr2R 22873699 intron CG13532 + chr2R 22873787 intron CG13532 + chr2R_9_22870001 chr2R_22870001 RAL-409_125b 1249 chr2R 22904994 22905064 chr2R 22905177 22905238 9 182 5.5 1.0 3.2 2.1 244 chr2R 22904994 intron nahoda + chr2R 22905116 intron nahoda + chr2R 22905238 intron nahoda + chr2R_9_22905001 chr2R_22905001 RAL-409_125b 1250 chr2R 22949149 22949209 chr2R 22949489 22949562 8 345 6.5 5.0 5.8 1.2 413 chr2R 22949149 intergenic not near genes chr2R 22949356 intergenic not near genes chr2R 22949562 intergenic not near genes chr2R_8_22945001 chr2R_22945001 RAL-409_125b 1251 chr2R 23037247 23037284 chr2R 23037366 23037399 4 114 9.5 7.0 8.2 0.4 152 chr2R 23037247 intron,intron twi +,CG42741 - chr2R 23037323 intron,intron twi +,CG42741 - chr2R 23037399 intron,intron twi +,CG42741 - chr2R_4_23035001 chr2R_23035001 RAL-409_125b 1252 chr2R 23045798 23045842 chr2R 23045929 23045977 5 134 0.0 9.0 4.5 0.9 179 chr2R 23045798 intron twi + chr2R 23045888 intron twi + chr2R 23045977 intron twi + chr2R_5_23045001 chr2R_23045001 RAL-409_125b 1253 chr2R 23048570 23048589 chr2R 23048694 23048716 4 124 3.5 5.0 4.2 0.8 146 chr2R 23048570 intergenic twi + chr2R 23048643 intergenic twi + chr2R 23048716 intergenic twi + chr2R_4_23045001 chr2R_23045001 RAL-409_125b 1254 chr2R 23061738 23061775 chr2R 23061842 23061895 12 116 8.0 7.0 7.5 1.4 157 chr2R 23061738 3` UTR l(2)06496 - chr2R 23061816 3` UTR l(2)06496 - chr2R 23061895 3` UTR l(2)06496 - chr2R_12_23060001 chr2R_23060001 RAL-409_125b 1255 chr2R 23134803 23134827 chr2R 23134935 23134938 4 118 5.0 8.5 6.8 0.5 135 chr2R 23134803 intergenic not near genes chr2R 23134870 intergenic not near genes chr2R 23134938 intergenic not near genes chr2R_4_23130001 chr2R_23130001 RAL-409_125b 1256 chr2R 23158299 23158353 chr2R 23158426 23158464 20 117 7.5 6.5 7.0 2.5 165 chr2R 23158299 intron CG9899 + chr2R 23158382 intron CG9899 + chr2R 23158464 intron CG9899 + chr2R_20_23155001 chr2R_23155001 RAL-409_125b 1257 chr2R 23174993 23175065 chr2R 23175114 23175186 19 119 5.0 3.5 4.2 3.7 193 chr2R 23174993 intron CG34371 - chr2R 23175090 intron CG34371 - chr2R 23175186 intron CG34371 - chr2R_19_23175001 chr2R_23175001 RAL-409_125b 1258 chr2R 23188509 23188580 chr2R 23188637 23188703 12 127 5.0 5.5 5.2 1.9 194 chr2R 23188509 intron CG34371 - chr2R 23188606 intron CG34371 - chr2R 23188703 intron CG34371 - chr2R_12_23185001 chr2R_23185001 RAL-409_125b 1259 chr2R 23195893 23195952 chr2R 23196017 23196078 7 127 6.0 10.0 8.0 0.8 185 chr2R 23195893 intron CG34371 - chr2R 23195986 intron CG34371 - chr2R 23196078 intron CG34371 - chr2R_7_23195001 chr2R_23195001 RAL-409_125b 1260 chr2R 23356233 23356267 chr2R 23356372 23356405 4 132 29.0 26.0 27.5 0.1 172 chr2R 23356233 3` UTR Rpi + chr2R 23356319 3` UTR Rpi + chr2R 23356405 3` UTR,3` UTR Rpi +,CG3500 - chr2R_4_23355001 chr2R_23355001 RAL-409_125b 1261 chr2R 23402592 23402606 chr2R 23407689 23407703 flea 5 5097 2.0 5.5 3.8 1.0 5111 chr2R 23402592 intergenic CG3520 - chr2R 23405148 intergenic not near genes chr2R 23407703 intergenic not near genes chr2R_5_23405001 chr2R_23405001 RAL-409_125b 1262 chr2R 23437192 23437221 chr2R 23437314 23437348 5 121 10.0 9.0 9.5 0.5 156 chr2R 23437192 intergenic not near genes chr2R 23437270 intergenic not near genes chr2R 23437348 intergenic not near genes chr2R_5_23435001 chr2R_23435001 RAL-409_125b 1263 chr2R 23461104 23461118 chr2R 23461229 23461231 4 122 13.0 6.5 9.8 0.4 127 chr2R 23461104 intron CG43795 + chr2R 23461168 intron CG43795 + chr2R 23461231 intron CG43795 + chr2R_4_23460001 chr2R_23460001 RAL-409_125b 1264 chr2R 23461120 23461136 chr2R 23461226 23461235 7 117 9.0 6.5 7.8 0.8 115 chr2R 23461120 intron CG43795 + chr2R 23461178 intron CG43795 + chr2R 23461235 intron CG43795 + chr2R_7_23460001 chr2R_23460001 RAL-409_125b 1265 chr2R 23487410 23487477 chr2R 23487540 23487609 20 126 8.5 5.0 6.8 2.6 199 chr2R 23487410 intron CG43795 + chr2R 23487510 intron CG43795 + chr2R 23487609 intron CG43795 + chr2R_20_23485001 chr2R_23485001 RAL-409_125b 1266 chr2R 23529572 23529595 chr2R 23537148 23537189 412 6 7595 7.0 4.0 5.5 0.9 7617 chr2R 23529572 intron bw - chr2R 23533380 intron bw - chr2R 23537189 exon bw - chr2R_6_23530001 chr2R_23530001 RAL-409_125b 1267 chr2R 23600948 23600952 chr2R 23601087 23601097 4 142 6.0 8.5 7.2 0.5 149 chr2R 23600948 3` UTR,3` UTR CG10332 -,IM18 - chr2R 23601022 3` UTR,exon CG10332 -,IM18 - chr2R 23601097 3` UTR,exon CG10332 -,IM18 - chr2R_4_23600001 chr2R_23600001 RAL-409_125b 1268 chr2R 23606992 23607190 chr2R 23607123 23607318 43 135 2.5 2.5 2.5 12.3 326 chr2R 23606992 intron CG17664 - chr2R 23607155 intron CG17664 - chr2R 23607318 intron CG17664 - chr2R_43_23605001 chr2R_23605001 RAL-409_125b 1269 chr2R 23635653 23635729 chr2R 23635778 23635855 8 113 6.5 5.5 6.0 1.1 202 chr2R 23635653 intron retn + chr2R 23635754 intron retn + chr2R 23635855 intron retn + chr2R_8_23635001 chr2R_23635001 RAL-409_125b 1270 chr2R 23784439 23784499 chr2R 23784552 23784627 12 126 5.5 4.0 4.8 2.1 188 chr2R 23784439 intron CG9850 - chr2R 23784533 intron CG9850 - chr2R 23784627 intron CG9850 - chr2R_12_23780001 chr2R_23780001 RAL-409_125b 1271 chr2R 23819112 23819142 chr2R 23819242 23819274 5 137 7.5 4.5 6.0 0.7 162 chr2R 23819112 intergenic not near genes chr2R 23819193 intergenic not near genes chr2R 23819274 intergenic not near genes chr2R_5_23815001 chr2R_23815001 RAL-409_125b 1272 chr2R 23824138 23824163 chr2R 23824269 23824304 9 138 9.5 10.0 9.8 0.8 166 chr2R 23824138 intron,intron CG5549 +,CG4763 - chr2R 23824221 intron,intron CG5549 +,CG4763 - chr2R 23824304 intron,intron CG5549 +,CG4763 - chr2R_9_23820001 chr2R_23820001 RAL-409_125b 1273 chr2R 23906783 23906843 chr2R 23906921 23906972 14 131 11.0 7.0 9.0 1.4 189 chr2R 23906783 intron Nap1 - chr2R 23906878 intron Nap1 - chr2R 23906972 intron Nap1 - chr2R_14_23905001 chr2R_23905001 RAL-409_125b 1274 chr2R 23914263 23914287 chr2R 23921929 23921957 412 10 7671 13.5 6.5 10.0 0.9 7694 chr2R 23914263 exon kcc + chr2R 23918110 intron kcc + chr2R 23921957 intron kcc + chr2R_10_23915001 chr2R_23915001 RAL-409_125b 1275 chr2R 23914288 23914324 chr2R 23921926 23921984 412 11 7663 7.5 6.0 6.8 1.4 7696 chr2R 23914288 exon kcc + chr2R 23918136 intron kcc + chr2R 23921984 exon kcc + chr2R_11_23915001 chr2R_23915001 RAL-409_125b 1276 chr2R 23926806 23926853 chr2R 23926918 23926985 9 127 2.5 4.0 3.2 2.1 179 chr2R 23926806 3` UTR,3` UTR Ca-P60A -,CG2812 + chr2R 23926896 3` UTR,3` UTR Ca-P60A -,CG2812 + chr2R 23926985 3` UTR Ca-P60A - chr2R_9_23925001 chr2R_23925001 RAL-409_125b 1277 chr2R 23986488 23986539 chr2R 23986618 23986669 14 128 5.5 5.0 5.2 2.3 181 chr2R 23986488 intron Phm - chr2R 23986578 intron Phm - chr2R 23986669 intron,5` UTR Phm -,CG30178 + chr2R_14_23985001 chr2R_23985001 RAL-409_125b 1278 chr2R 24031347 24031411 chr2R 24031465 24031513 11 127 3.5 5.0 4.2 2.1 166 chr2R 24031347 5` UTR CG30172 - chr2R 24031430 intergenic CG30172 -,Chi - chr2R 24031513 intergenic Chi -,CG30172 - chr2R_11_24030001 chr2R_24030001 RAL-409_125b 1279 chr2R 24077886 24077956 chr2R 24078006 24078136 21 126 5.0 5.0 5.0 3.5 250 chr2R 24077886 3` UTR Mlp60A + chr2R 24078011 3` UTR Mlp60A + chr2R 24078136 3` UTR Mlp60A + chr2R_21_24075001 chr2R_24075001 RAL-409_125b 1280 chr2R 24087169 24087216 chr2R 24087317 24087383 14 165 6.0 6.5 6.2 1.9 214 chr2R 24087169 intron snama + chr2R 24087276 intron snama + chr2R 24087383 intron snama + chr2R_14_24085001 chr2R_24085001 RAL-409_125b 1281 chr2R 24138267 24138334 chr2R 24138471 24138543 17 203 8.0 8.5 8.2 1.8 276 chr2R 24138267 intergenic CG4065 -,CR44826 + chr2R 24138405 intergenic CR44826 +,CG4065 - chr2R 24138543 intergenic CR44826 +,CG4065 - chr2R_17_24135001 chr2R_24135001 RAL-409_125b 1282 chr2R 24147033 24147096 chr2R 24154656 24154717 412 12 7618 4.0 6.0 5.0 2.0 7684 chr2R 24147033 intron Dat + chr2R 24150875 intron Dat + chr2R 24154717 intron Dat + chr2R_12_24150001 chr2R_24150001 RAL-409_125b 1283 chr2R 24177199 24177258 chr2R 24184734 24184793 412 17 7533 9.5 8.0 8.8 1.7 7594 chr2R 24177199 3` UTR Nop60B + chr2R 24180996 intron Nop60B + chr2R 24184793 3` UTR Nop60B + chr2R_17_24180001 chr2R_24180001 RAL-409_125b 1284 chr2R 24224435 24224505 chr2R 24224864 24224924 18 414 5.5 5.0 5.2 2.9 489 chr2R 24224435 intron CG30419 - chr2R 24224680 intron CG30419 - chr2R 24224924 intron CG30419 - chr2R_18_24220001 chr2R_24220001 RAL-409_125b 1285 chr2R 24257680 24257744 chr2R 24257921 24257969 15 236 6.5 4.0 5.2 2.4 289 chr2R 24257680 intergenic CG13575 +,CG3376 + chr2R 24257824 intergenic CG3376 +,CG13575 + chr2R 24257969 intergenic CG3376 + chr2R_15_24255001 chr2R_24255001 RAL-409_125b 1286 chr2R 24274794 24274860 chr2R 24274921 24274996 6 128 3.0 1.0 2.0 2.0 202 chr2R 24274794 intergenic not near genes chr2R 24274895 intergenic not near genes chr2R 24274996 intergenic not near genes chr2R_6_24270001 chr2R_24270001 RAL-409_125b 1287 chr2R 24320154 24320204 chr2R 24320288 24320297 8 135 5.0 6.5 5.8 1.2 143 chr2R 24320154 intergenic not near genes chr2R 24320226 intergenic not near genes chr2R 24320297 intergenic not near genes chr2R_8_24320001 chr2R_24320001 RAL-409_125b 1288 chr2R 24353393 24353430 chr2R 24361805 24361816 roo 10 8407 8.0 9.0 8.5 1.1 8423 chr2R 24353393 intron,intron bs +,CR44811 - chr2R 24357604 intron,intron bs +,CR44811 - chr2R 24361816 intron,intron bs +,CR44811 - chr2R_10_24355001 chr2R_24355001 RAL-409_125b 1289 chr2R 24481421 24481476 chr2R 24481544 24481607 7 122 3.0 12.5 7.8 0.8 186 chr2R 24481421 intron CG13579 + chr2R 24481514 intron CG13579 + chr2R 24481607 intron CG13579 + chr2R_7_24480001 chr2R_24480001 RAL-409_125b 1290 chr2R 24493043 24493076 chr2R 24493177 24493214 16 137 8.5 6.0 7.2 2.0 171 chr2R 24493043 intergenic CG13589 -,CG13590 - chr2R 24493128 intergenic CG13590 -,CG13589 - chr2R 24493214 intergenic CG13590 -,CG13589 - chr2R_16_24490001 chr2R_24490001 RAL-409_125b 1291 chr2R 24590074 24590101 chr2R 24590211 24590235 7 136 10.5 4.5 7.5 0.8 161 chr2R 24590074 intron pio + chr2R 24590154 intron pio + chr2R 24590235 intron pio + chr2R_7_24590001 chr2R_24590001 RAL-409_125b 1292 chr2R 24590106 24590142 chr2R 24590202 24590204 14 119 4.5 3.5 4.0 2.8 98 chr2R 24590106 intron pio + chr2R 24590155 intron pio + chr2R 24590204 intron pio + chr2R_14_24590001 chr2R_24590001 RAL-409_125b 1293 chr2R 24636857 24636877 chr2R 24636993 24637008 5 135 14.5 0.5 7.5 0.6 151 chr2R 24636857 intron CG13594 - chr2R 24636932 intron CG13594 - chr2R 24637008 intron CG13594 - chr2R_5_24635001 chr2R_24635001 RAL-409_125b 1294 chr2R 24647537 24647575 chr2R 24655153 24655182 412 5 7614 4.5 6.0 5.2 0.8 7645 chr2R 24647537 intergenic not near genes chr2R 24651360 intergenic not near genes chr2R 24655182 intergenic not near genes chr2R_5_24650001 chr2R_24650001 RAL-409_125b 1295 chr2R 24727853 24727893 chr2R 24735401 24735428 mdg1 10 7540 4.5 5.5 5.0 1.7 7575 chr2R 24727853 intron Mid1 - chr2R 24731640 intron Mid1 - chr2R 24735428 intron Mid1 - chr2R_10_24730001 chr2R_24730001 RAL-409_125b 1296 chr2R 24763580 24763644 chr2R 24765595 24765635 G2 12 2002 4.5 6.0 5.2 1.9 2055 chr2R 24763580 exon CG3894 + chr2R 24764608 intron CG3894 + chr2R 24765635 exon CG3894 + chr2R_12_24760001 chr2R_24760001 RAL-409_125b 1297 chr2R 24791974 24792008 chr2R 24792360 24792402 7 384 8.5 11.5 10.0 0.6 428 chr2R 24791974 intron Reg-5 - chr2R 24792188 intron Reg-5 - chr2R 24792402 intron Reg-5 - chr2R_7_24790001 chr2R_24790001 RAL-409_125b 1298 chr2R 24883846 24883910 chr2R 24883974 24884002 16 124 8.5 9.5 9.0 1.6 156 chr2R 24883846 intron NKAIN + chr2R 24883924 intron NKAIN + chr2R 24884002 intron NKAIN + chr2R_16_24880001 chr2R_24880001 RAL-409_125b 1299 chr2R 24956240 24956277 chr2R 24956350 24956362 6 104 6.0 7.5 6.8 0.8 122 chr2R 24956240 3` UTR CR44830 - chr2R 24956301 3` UTR CR44830 - chr2R 24956362 3` UTR CR44830 - chr2R_6_24955001 chr2R_24955001 RAL-409_125b 1300 chr2R 24956704 24956775 chr2R 24957182 24957238 11 464 8.5 8.5 8.5 1.2 534 chr2R 24956704 3` UTR CR44830 - chr2R 24956971 3` UTR CR44830 - chr2R 24957238 3` UTR CR44830 - chr2R_11_24955001 chr2R_24955001 RAL-409_125b 1301 chr2R 25014514 25014570 chr2R 25014626 25014696 14 118 6.5 7.5 7.0 1.8 182 chr2R 25014514 intron uzip + chr2R 25014605 intron uzip + chr2R 25014696 intron uzip + chr2R_14_25010001 chr2R_25010001 RAL-409_125b 1302 chr2R 25018298 25018368 chr2R 25018449 25018519 23 147 3.0 7.0 5.0 3.8 221 chr2R 25018298 intron uzip + chr2R 25018408 intron uzip + chr2R 25018519 intron uzip + chr2R_23_25015001 chr2R_25015001 RAL-409_125b 1303 chr2R 25022595 25022660 chr2R 25022729 25022768 21 129 4.5 6.5 5.5 3.2 173 chr2R 25022595 intron uzip + chr2R 25022682 intron uzip + chr2R 25022768 intron uzip + chr2R_21_25020001 chr2R_25020001 RAL-409_125b 1304 chr2R 25042373 25042430 chr2R 25042499 25042554 13 119 6.5 7.5 7.0 1.6 181 chr2R 25042373 intron gsb-n - chr2R 25042464 intron gsb-n - chr2R 25042554 intron gsb-n - chr2R_13_25040001 chr2R_25040001 RAL-409_125b 1305 chr2R 25061300 25061312 chr2R 25061423 25061445 4 125 14.0 3.5 8.8 0.4 145 chr2R 25061300 intergenic not near genes chr2R 25061372 intergenic not near genes chr2R 25061445 intergenic not near genes chr2R_4_25060001 chr2R_25060001 RAL-409_125b 1306 chr2R 25061313 25061365 chr2R 25061421 25061457 17 117 4.5 3.5 4.0 3.4 144 chr2R 25061313 intergenic not near genes chr2R 25061385 intergenic not near genes chr2R 25061457 intergenic not near genes chr2R_17_25060001 chr2R_25060001 RAL-409_125b 1307 chr2R 25081564 25081636 chr2R 25082709 25082777 14 1141 4.0 6.5 5.2 2.3 1213 chr2R 25081564 intron gol - chr2R 25082170 intron gol - chr2R 25082777 intron gol - chr2R_14_25080001 chr2R_25080001 RAL-409_125b 1308 chr2R 25101240 25101296 chr2R 25101392 25101447 15 149 6.0 7.5 6.8 1.9 207 chr2R 25101240 intron lov - chr2R 25101344 intron lov - chr2R 25101447 intron lov - chr2R_15_25100001 chr2R_25100001 RAL-409_125b 1309 chr2R 25141626 25141677 chr2R 25159346 25159417 roo 14 17732 4.0 9.0 6.5 1.9 17791 chr2R 25141626 intergenic not near genes chr2R 25150522 intergenic not near genes chr2R 25159417 intergenic not near genes chr2R_14_25150001 chr2R_25150001 RAL-409_125b 1310 chr2R 25234735 25234794 chr2R 25234849 25234909 15 125 7.0 8.0 7.5 1.8 174 chr2R 25234735 intron CG9380 - chr2R 25234822 intron CG9380 - chr2R 25234909 intron CG9380 - chr2R_15_25230001 chr2R_25230001 RAL-409_125b 1311 chr2R 25239475 25239540 chr2R 25240100 25240156 4 623 5.0 6.5 5.8 0.6 681 chr2R 25239475 intron CG9380 - chr2R 25239816 intron CG9380 - chr2R 25240156 intron CG9380 - chr2R_4_25235001 chr2R_25235001 RAL-409_125b 1312 chr3L 68936 69007 chr3L 69073 69138 16 130 3.5 4.5 4.0 3.2 202 chr3L 68936 3` UTR Lsp1gamma + chr3L 69037 intergenic Lsp1gamma +,CR44510 + chr3L 69138 5` UTR CR44510 + chr3L_16_65001 chr3L_65001 RAL-409_125b 1313 chr3L 93782 93819 chr3L 93870 93931 15 107 5.0 6.0 5.5 2.3 149 chr3L 93782 intergenic not near genes chr3L 93856 intergenic not near genes chr3L 93931 intergenic not near genes chr3L_15_90001 chr3L_90001 RAL-409_125b 1314 chr3L 105716 105979 chr3L 105861 106158 8 174 12.0 24.5 18.2 0.4 442 chr3L 105716 intergenic not near genes chr3L 105937 intergenic not near genes chr3L 106158 intergenic not near genes chr3L_8_105001 chr3L_105001 RAL-409_125b 1315 chr3L 105998 106026 chr3L 106156 106205 12 170 3.5 7.5 5.5 1.8 207 chr3L 105998 intergenic not near genes chr3L 106102 intergenic not near genes chr3L 106205 intergenic not near genes chr3L_12_105001 chr3L_105001 RAL-409_125b 1316 chr3L 110172 110210 chr3L 119389 119427 roo 10 9215 6.5 5.0 5.8 1.5 9255 chr3L 110172 intergenic not near genes chr3L 114800 intergenic not near genes chr3L 119427 intergenic not near genes chr3L_10_110001 chr3L_110001 RAL-409_125b 1317 chr3L 110214 110242 chr3L 119385 119393 roo 11 9205 5.0 5.0 5.0 1.8 9179 chr3L 110214 intergenic not near genes chr3L 114804 intergenic not near genes chr3L 119393 intergenic not near genes chr3L_11_110001 chr3L_110001 RAL-409_125b 1318 chr3L 161662 161711 chr3L 162538 162587 8 875 8.5 9.0 8.8 0.8 925 chr3L 161662 intron p130CAS + chr3L 162124 intron p130CAS + chr3L 162587 intron p130CAS + chr3L_8_160001 chr3L_160001 RAL-409_125b 1319 chr3L 164896 164945 chr3L 165033 165094 15 146 8.0 8.0 8.0 1.7 198 chr3L 164896 intron p130CAS + chr3L 164995 intron p130CAS + chr3L 165094 intron p130CAS + chr3L_15_160001 chr3L_160001 RAL-409_125b 1320 chr3L 165628 165706 chr3L 165816 165874 19 184 5.0 5.5 5.2 3.1 246 chr3L 165628 intron p130CAS + chr3L 165751 intron p130CAS + chr3L 165874 intron p130CAS + chr3L_19_165001 chr3L_165001 RAL-409_125b 1321 chr3L 338770 338837 chr3L 338914 338954 14 139 11.0 9.5 10.2 1.2 184 chr3L 338770 intron,intron Ptpmeg +,mthl10 - chr3L 338862 intron,intron Ptpmeg +,mthl10 - chr3L 338954 intron,intron Ptpmeg +,mthl10 - chr3L_14_335001 chr3L_335001 RAL-409_125b 1322 chr3L 343160 343175 chr3L 343322 343348 8 167 13.5 10.5 12.0 0.6 188 chr3L 343160 intron Ptpmeg + chr3L 343254 intron Ptpmeg + chr3L 343348 intron Ptpmeg + chr3L_8_340001 chr3L_340001 RAL-409_125b 1323 chr3L 402670 402708 chr3L 409742 409811 297 14 7088 6.5 7.0 6.8 1.8 7141 chr3L 402670 intergenic not near genes chr3L 406240 intergenic not near genes chr3L 409811 intergenic not near genes chr3L_14_405001 chr3L_405001 RAL-409_125b 1324 chr3L 421012 421033 chr3L 421154 421179 6 143 6.0 2.0 4.0 1.2 167 chr3L 421012 intergenic not near genes chr3L 421096 intergenic not near genes chr3L 421179 intergenic not near genes chr3L_6_420001 chr3L_420001 RAL-409_125b 1325 chr3L 421034 421078 chr3L 421150 421198 10 133 3.0 2.0 2.5 2.9 164 chr3L 421034 intergenic not near genes chr3L 421116 intergenic not near genes chr3L 421198 intergenic not near genes chr3L_10_420001 chr3L_420001 RAL-409_125b 1326 chr3L 428143 428152 chr3L 428314 428323 4 169 10.5 2.0 6.2 0.6 180 chr3L 428143 intergenic not near genes chr3L 428233 intergenic not near genes chr3L 428323 intergenic not near genes chr3L_4_425001 chr3L_425001 RAL-409_125b 1327 chr3L 494554 494572 chr3L 494686 494698 6 129 10.5 5.0 7.8 0.7 144 chr3L 494554 intron klar - chr3L 494626 intron klar - chr3L 494698 intron klar - chr3L_6_490001 chr3L_490001 RAL-409_125b 1328 chr3L 494580 494614 chr3L 494676 494752 5 128 4.5 4.0 4.2 1.0 172 chr3L 494580 intron klar - chr3L 494666 intron klar - chr3L 494752 intron klar - chr3L_5_490001 chr3L_490001 RAL-409_125b 1329 chr3L 514228 514302 chr3L 514355 514421 22 123 3.0 4.0 3.5 4.9 193 chr3L 514228 intron klar - chr3L 514324 intron klar - chr3L 514421 intron klar - chr3L_22_510001 chr3L_510001 RAL-409_125b 1330 chr3L 563926 563988 chr3L 564155 564216 19 227 7.5 6.5 7.0 2.4 290 chr3L 563926 intron hipk + chr3L 564071 intron hipk + chr3L 564216 intron hipk + chr3L_19_560001 chr3L_560001 RAL-409_125b 1331 chr3L 610987 611026 chr3L 611151 611190 5 157 13.0 13.5 13.2 0.4 203 chr3L 610987 intergenic not near genes chr3L 611088 intergenic not near genes chr3L 611190 intergenic not near genes chr3L_5_610001 chr3L_610001 RAL-409_125b 1332 chr3L 643826 643829 chr3L 21448023 21448027 5 20804199 20.5 20.5 20.5 0.2 20804201 chr3L 643826 5` UTR CR43334 + chr3L 11045926 intron CG43693 - chr3L 21448027 3` UTR Syx7 + chr3L_5_11045001 chr3L_11045001 RAL-409_125b 1333 chr3L 651345 651373 chr3L 651483 651511 9 136 12.5 10.5 11.5 0.7 166 chr3L 651345 intergenic Gale +,CG3402 - chr3L 651428 intergenic CG3402 -,Gale + chr3L 651511 intergenic CG3402 -,Gale + chr3L_9_650001 chr3L_650001 RAL-409_125b 1334 chr3L 651380 651406 chr3L 651480 651544 10 129 8.5 10.5 9.5 1.0 164 chr3L 651380 intergenic Gale +,CG3402 - chr3L 651462 intergenic CG3402 -,Gale + chr3L 651544 3` UTR CG3402 - chr3L_10_650001 chr3L_650001 RAL-409_125b 1335 chr3L 705859 705913 chr3L 706005 706054 13 145 7.5 7.0 7.2 1.6 195 chr3L 705859 intergenic CG13895 -,CR44514 + chr3L 705956 3` UTR CG13895 - chr3L 706054 3` UTR CG13895 - chr3L_13_705001 chr3L_705001 RAL-409_125b 1336 chr3L 732787 732842 chr3L 733054 733083 11 263 5.5 4.5 5.0 1.8 296 chr3L 732787 intergenic not near genes chr3L 732935 intergenic not near genes chr3L 733083 intergenic not near genes chr3L_11_730001 chr3L_730001 RAL-409_125b 1337 chr3L 774797 774845 chr3L 774920 774979 10 126 9.0 5.5 7.2 1.2 182 chr3L 774797 intergenic not near genes chr3L 774888 intergenic not near genes chr3L 774979 intergenic not near genes chr3L_10_770001 chr3L_770001 RAL-409_125b 1338 chr3L 789862 789938 chr3L 790397 790474 roo 10 533 0.0 1.0 0.5 6.7 612 chr3L 789862 intergenic not near genes chr3L 790168 intergenic not near genes chr3L 790474 intergenic not near genes chr3L_10_790001 chr3L_790001 RAL-409_125b 1339 chr3L 854140 854199 chr3L 854262 854327 13 126 3.5 4.5 4.0 2.6 187 chr3L 854140 exon dpr20 - chr3L 854234 intron dpr20 - chr3L 854327 exon dpr20 - chr3L_13_850001 chr3L_850001 RAL-409_125b 1340 chr3L 857967 858019 chr3L 866482 866519 Tirant 12 8505 3.0 3.0 3.0 3.0 8552 chr3L 857967 intergenic not near genes chr3L 862243 intergenic not near genes chr3L 866519 5` UTR CG12502 + chr3L_12_860001 chr3L_860001 RAL-409_125b 1341 chr3L 875621 875676 chr3L 875749 875813 11 127 10.0 7.0 8.5 1.2 192 chr3L 875621 intron CG32479 + chr3L 875717 intron CG32479 + chr3L 875813 intron CG32479 + chr3L_11_875001 chr3L_875001 RAL-409_125b 1342 chr3L 916128 916191 chr3L 916299 916362 15 168 9.0 5.0 7.0 1.9 234 chr3L 916128 intron Glut1 + chr3L 916245 intron Glut1 + chr3L 916362 intron Glut1 + chr3L_15_915001 chr3L_915001 RAL-409_125b 1343 chr3L 925137 925198 chr3L 932613 932674 mdg1 18 7474 3.0 3.5 3.2 4.3 7537 chr3L 925137 intron Glut1 + chr3L 928906 intron Glut1 + chr3L 932674 intron Glut1 + chr3L_18_925001 chr3L_925001 RAL-409_125b 1344 chr3L 939731 939789 chr3L 940902 940948 jockey 12 1166 4.0 5.5 4.8 2.1 1217 chr3L 939731 intron Glut1 + chr3L 940340 intron Glut1 + chr3L 940948 intron Glut1 + chr3L_12_940001 chr3L_940001 RAL-409_125b 1345 chr3L 1015115 1015166 chr3L 1015232 1015284 4 112 0.0 3.5 1.8 1.4 169 chr3L 1015115 intron trio - chr3L 1015200 intron trio - chr3L 1015284 intron trio - chr3L_4_1015001 chr3L_1015001 RAL-409_125b 1346 chr3L 1028770 1028832 chr3L 1028906 1028968 24 135 5.5 5.0 5.2 3.9 198 chr3L 1028770 intron trio - chr3L 1028869 intron trio - chr3L 1028968 intron trio - chr3L_24_1025001 chr3L_1025001 RAL-409_125b 1347 chr3L 1031548 1031597 chr3L 1031657 1031702 12 109 6.0 3.5 4.8 2.1 154 chr3L 1031548 intron trio - chr3L 1031625 intron trio - chr3L 1031702 intron trio - chr3L_12_1030001 chr3L_1030001 RAL-409_125b 1348 chr3L 1047330 1047385 chr3L 1055178 1055223 412 6 7841 2.5 7.5 5.0 1.0 7893 chr3L 1047330 intron bab1 - chr3L 1051276 intron bab1 - chr3L 1055223 intron bab1 - chr3L_6_1050001 chr3L_1050001 RAL-409_125b 1349 chr3L 1154076 1154157 chr3L 1163279 1163357 roo 11 9200 7.5 3.0 5.2 1.8 9281 chr3L 1154076 intron bab2 - chr3L 1158716 intron bab2 - chr3L 1163357 intron bab2 - chr3L_11_1155001 chr3L_1155001 RAL-409_125b 1350 chr3L 1166987 1167003 chr3L 1167108 1167130 6 126 5.0 2.5 3.8 1.2 143 chr3L 1166987 intron bab2 - chr3L 1167058 intron bab2 - chr3L 1167130 intron bab2 - chr3L_6_1165001 chr3L_1165001 RAL-409_125b 1351 chr3L 1219571 1219591 chr3L 1227329 1227337 412 5 7765 7.5 4.5 6.0 0.7 7766 chr3L 1219571 intron mwh + chr3L 1223454 intron mwh + chr3L 1227337 intron mwh + chr3L_5_1220001 chr3L_1220001 RAL-409_125b 1352 chr3L 1219592 1219602 chr3L 1227328 1227385 412 6 7764 6.5 4.5 5.5 0.9 7793 chr3L 1219592 intron mwh + chr3L 1223488 intron mwh + chr3L 1227385 intron mwh + chr3L_6_1220001 chr3L_1220001 RAL-409_125b 1353 chr3L 1236198 1236238 chr3L 1236315 1236355 8 119 2.5 1.0 1.8 2.9 157 chr3L 1236198 intron CG9194 + chr3L 1236276 intron CG9194 + chr3L 1236355 intron CG9194 + chr3L_8_1235001 chr3L_1235001 RAL-409_125b 1354 chr3L 1257620 1257648 chr3L 1257750 1257769 5 128 0.5 12.5 6.5 0.7 149 chr3L 1257620 intron CG9134 + chr3L 1257694 intron CG9134 + chr3L 1257769 intron CG9134 + chr3L_5_1255001 chr3L_1255001 RAL-409_125b 1355 chr3L 1310989 1311030 chr3L 1315801 1315875 16 4826 36.0 39.5 37.8 0.4 4886 chr3L 1310989 exon CG2469 + chr3L 1313432 intergenic CG9186 -,CG9153 + chr3L 1315875 exon CG9153 + chr3L_16_1310001 chr3L_1310001 RAL-409_125b 1356 chr3L 1361260 1361314 chr3L 1361366 1361425 6 109 8.0 4.5 6.2 0.8 165 chr3L 1361260 intron Ptp61F - chr3L 1361342 intron Ptp61F - chr3L 1361425 intron Ptp61F - chr3L_6_1360001 chr3L_1360001 RAL-409_125b 1357 chr3L 1396710 1396729 chr3L 1396829 1396852 9 124 7.0 4.0 5.5 1.4 142 chr3L 1396710 intron Ptp61F - chr3L 1396781 intron Ptp61F - chr3L 1396852 intron Ptp61F - chr3L_9_1395001 chr3L_1395001 RAL-409_125b 1358 chr3L 1396735 1396754 chr3L 1396826 1396863 4 117 3.5 4.0 3.8 0.8 128 chr3L 1396735 intron Ptp61F - chr3L 1396799 intron Ptp61F - chr3L 1396863 intron Ptp61F - chr3L_4_1395001 chr3L_1395001 RAL-409_125b 1359 chr3L 1424761 1424764 chr3L 1430039 1430060 Rt1a 5 5293 0.0 5.5 2.8 1.3 5299 chr3L 1424761 intron Ptp61F - chr3L 1427410 intron Ptp61F - chr3L 1430060 intron Ptp61F - chr3L_5_1425001 chr3L_1425001 RAL-409_125b 1360 chr3L 1485700 1485726 chr3L 1486915 1486947 1360 5 1217 5.5 10.5 8.0 0.6 1247 chr3L 1485700 intron stet - chr3L 1486324 intron stet - chr3L 1486947 intron stet - chr3L_5_1485001 chr3L_1485001 RAL-409_125b 1361 chr3L 1485728 1485738 chr3L 1486914 1486928 1360 6 1209 3.0 10.0 6.5 0.8 1200 chr3L 1485728 intron stet - chr3L 1486328 intron stet - chr3L 1486928 intron stet - chr3L_6_1485001 chr3L_1485001 RAL-409_125b 1362 chr3L 1505960 1505969 chr3L 1513607 1513616 17.6 4 7647 13.0 5.5 9.2 0.4 7656 chr3L 1505960 intron,intron Psa +,cue - chr3L 1509788 intron,intron Psa +,cue - chr3L 1513616 intron,intron Psa +,cue - chr3L_4_1505001 chr3L_1505001 RAL-409_125b 1363 chr3L 1505973 1506020 chr3L 1513599 1513667 17.6 20 7643 4.5 5.0 4.8 3.4 7694 chr3L 1505973 intron,intron Psa +,cue - chr3L 1509820 intron,intron Psa +,cue - chr3L 1513667 intron,intron Psa +,cue - chr3L_20_1505001 chr3L_1505001 RAL-409_125b 1364 chr3L 1569477 1569520 chr3L 1569601 1569626 12 117 13.0 13.5 13.2 0.8 149 chr3L 1569477 5` UTR CG12004 + chr3L 1569552 intron CG12004 + chr3L 1569626 intron CG12004 + chr3L_12_1565001 chr3L_1565001 RAL-409_125b 1365 chr3L 1588773 1588829 chr3L 1588910 1588955 6 133 16.0 10.5 13.2 0.4 182 chr3L 1588773 5` UTR CG13917 + chr3L 1588864 5` UTR CG13917 + chr3L 1588955 intron CG13917 + chr3L_6_1585001 chr3L_1585001 RAL-409_125b 1366 chr3L 1632907 1632913 chr3L 1632981 1633039 5 100 8.5 6.0 7.2 0.6 132 chr3L 1632907 intron nSyb - chr3L 1632973 intron nSyb - chr3L 1633039 intron nSyb - chr3L_5_1630001 chr3L_1630001 RAL-409_125b 1367 chr3L 1639164 1639241 chr3L 1639394 1639467 21 226 2.5 5.0 3.8 4.4 303 chr3L 1639164 5` UTR metl - chr3L 1639316 intergenic metl -,Bgb + chr3L 1639467 intergenic metl -,Bgb + chr3L_21_1635001 chr3L_1635001 RAL-409_125b 1368 chr3L 1674281 1674353 chr3L 1674414 1674473 17 120 5.5 3.0 4.2 3.3 192 chr3L 1674281 intergenic CG7991 + chr3L 1674377 intergenic CG7991 + chr3L 1674473 intergenic CG7991 + chr3L_17_1670001 chr3L_1670001 RAL-409_125b 1369 chr3L 1740807 1740884 chr3L 1741102 1741134 pogo 17 286 5.0 9.0 7.0 2.1 327 chr3L 1740807 intron Gk + chr3L 1740970 intron Gk + chr3L 1741134 intron Gk + chr3L_17_1740001 chr3L_1740001 RAL-409_125b 1370 chr3L 1805654 1805666 chr3L 1805878 1805890 4 222 10.0 4.0 7.0 0.5 236 chr3L 1805654 exon CG42676 + chr3L 1805772 intron CG42676 + chr3L 1805890 intron CG42676 + chr3L_4_1805001 chr3L_1805001 RAL-409_125b 1371 chr3L 1809971 1809999 chr3L 1810212 1810240 5 241 3.0 5.5 4.2 1.0 269 chr3L 1809971 intergenic not near genes chr3L 1810106 intergenic GV1 + chr3L 1810240 intergenic GV1 + chr3L_5_1810001 chr3L_1810001 RAL-409_125b 1372 chr3L 1841428 1841499 chr3L 1841682 1841747 12 252 5.0 3.0 4.0 2.4 319 chr3L 1841428 intron Cpr62Bc - chr3L 1841588 intron Cpr62Bc - chr3L 1841747 intron Cpr62Bc - chr3L_12_1840001 chr3L_1840001 RAL-409_125b 1373 chr3L 1853004 1853042 chr3L 1853138 1853176 9 133 5.0 4.5 4.8 1.6 172 chr3L 1853004 intron CG13936 - chr3L 1853090 intron CG13936 - chr3L 1853176 intron CG13936 - chr3L_9_1850001 chr3L_1850001 RAL-409_125b 1374 chr3L 1882320 1882382 chr3L 1882464 1882526 16 142 9.5 6.0 7.8 1.8 206 chr3L 1882320 intron CG13937 - chr3L 1882423 intron CG13937 - chr3L 1882526 intron CG13937 - chr3L_16_1880001 chr3L_1880001 RAL-409_125b 1375 chr3L 2016052 2016084 chr3L 2016213 2016240 5 169 10.0 1.5 5.8 0.7 188 chr3L 2016052 intergenic not near genes chr3L 2016146 intergenic not near genes chr3L 2016240 intergenic not near genes chr3L_5_2015001 chr3L_2015001 RAL-409_125b 1376 chr3L 2108208 2108271 chr3L 2113460 2113525 copia 16 5252 5.0 8.0 6.5 2.1 5317 chr3L 2108208 intron sls - chr3L 2110866 intron sls - chr3L 2113525 intron sls - chr3L_16_2110001 chr3L_2110001 RAL-409_125b 1377 chr3L 2139162 2139234 chr3L 2139293 2139365 13 129 4.5 5.5 5.0 2.2 203 chr3L 2139162 intron zormin - chr3L 2139264 intron zormin - chr3L 2139365 intron zormin - chr3L_13_2135001 chr3L_2135001 RAL-409_125b 1378 chr3L 2168728 2168794 chr3L 2168868 2168935 18 138 8.0 10.5 9.2 1.8 207 chr3L 2168728 exon CG15879 - chr3L 2168832 intron CG15879 - chr3L 2168935 intron CG15879 - chr3L_18_2165001 chr3L_2165001 RAL-409_125b 1379 chr3L 2199789 2199818 chr3L 2199904 2199928 11 118 1.5 9.0 5.2 1.8 139 chr3L 2199789 intergenic not near genes chr3L 2199858 intergenic not near genes chr3L 2199928 intergenic not near genes chr3L_11_2195001 chr3L_2195001 RAL-409_125b 1380 chr3L 2290255 2290275 chr3L 2290359 2290405 4 124 1.0 7.5 4.2 0.8 150 chr3L 2290255 intron MsR2 + chr3L 2290330 intron MsR2 + chr3L 2290405 intron MsR2 + chr3L_4_2290001 chr3L_2290001 RAL-409_125b 1381 chr3L 2302389 2302456 chr3L 2302907 2302974 14 517 6.5 5.5 6.0 2.0 585 chr3L 2302389 intergenic not near genes chr3L 2302682 intergenic not near genes chr3L 2302974 intergenic not near genes chr3L_14_2300001 chr3L_2300001 RAL-409_125b 1382 chr3L 2307960 2308027 chr3L 2308115 2308172 19 150 9.0 6.0 7.5 2.2 212 chr3L 2307960 intergenic not near genes chr3L 2308066 intergenic not near genes chr3L 2308172 intergenic not near genes chr3L_19_2305001 chr3L_2305001 RAL-409_125b 1383 chr3L 2309281 2309331 chr3L 2309608 2309657 4 331 4.5 1.5 3.0 1.0 376 chr3L 2309281 intergenic not near genes chr3L 2309469 intergenic not near genes chr3L 2309657 intergenic not near genes chr3L_4_2305001 chr3L_2305001 RAL-409_125b 1384 chr3L 2355400 2355459 chr3L 2355638 2355697 9 235 3.0 1.5 2.2 2.8 297 chr3L 2355400 intergenic not near genes chr3L 2355548 intergenic not near genes chr3L 2355697 intergenic not near genes chr3L_9_2355001 chr3L_2355001 RAL-409_125b 1385 chr3L 2360686 2360727 chr3L 2360929 2360979 4 242 8.0 4.0 6.0 0.6 293 chr3L 2360686 exon CG13801 + chr3L 2360832 exon CG13801 + chr3L 2360979 exon CG13801 + chr3L_4_2360001 chr3L_2360001 RAL-409_125b 1386 chr3L 2411302 2411341 chr3L 2411417 2411466 10 121 3.0 3.0 3.0 2.5 164 chr3L 2411302 intron CG45186 + chr3L 2411384 intron CG45186 + chr3L 2411466 intron CG45186 + chr3L_10_2410001 chr3L_2410001 RAL-409_125b 1387 chr3L 2414425 2414481 chr3L 2414629 2414685 14 201 6.5 10.5 8.5 1.5 260 chr3L 2414425 intron CG45186 + chr3L 2414555 intron CG45186 + chr3L 2414685 intron CG45186 + chr3L_14_2410001 chr3L_2410001 RAL-409_125b 1388 chr3L 2447463 2447529 chr3L 2456669 2456730 roo 16 9200 6.0 4.5 5.2 2.6 9267 chr3L 2447463 intron CG45186 + chr3L 2452096 intron CG45186 + chr3L 2456730 intron CG45186 + chr3L_16_2450001 chr3L_2450001 RAL-409_125b 1389 chr3L 2467454 2467474 chr3L 2467601 2467616 4 144 3.0 6.0 4.5 0.7 162 chr3L 2467454 intron CG45186 + chr3L 2467535 intron CG45186 + chr3L 2467616 intron CG45186 + chr3L_4_2465001 chr3L_2465001 RAL-409_125b 1390 chr3L 2482903 2482968 chr3L 2483031 2483090 18 136 3.5 6.5 5.0 3.0 187 chr3L 2482903 intron CG45186 + chr3L 2482996 intron CG45186 + chr3L 2483090 intron CG45186 + chr3L_18_2480001 chr3L_2480001 RAL-409_125b 1391 chr3L 2493786 2493848 chr3L 2493909 2493986 7 135 3.5 1.0 2.2 2.2 200 chr3L 2493786 intron CG45186 + chr3L 2493886 intron CG45186 + chr3L 2493986 intron CG45186 + chr3L_7_2490001 chr3L_2490001 RAL-409_125b 1392 chr3L 2515388 2515426 chr3L 2515515 2515548 7 127 2.5 9.5 6.0 1.0 160 chr3L 2515388 intron Spn - chr3L 2515468 intron Spn - chr3L 2515548 intron Spn - chr3L_7_2515001 chr3L_2515001 RAL-409_125b 1393 chr3L 2533625 2533672 chr3L 2533742 2533764 7 100 7.0 10.0 8.5 0.7 139 chr3L 2533625 intron Spn - chr3L 2533694 intron Spn - chr3L 2533764 intron Spn - chr3L_7_2530001 chr3L_2530001 RAL-409_125b 1394 chr3L 2561505 2561560 chr3L 2561622 2561680 20 124 5.5 7.0 6.2 2.8 175 chr3L 2561505 intron msn - chr3L 2561592 intron msn - chr3L 2561680 intron msn - chr3L_20_2560001 chr3L_2560001 RAL-409_125b 1395 chr3L 2575961 2575988 chr3L 2576094 2576121 6 133 11.5 6.5 9.0 0.6 160 chr3L 2575961 intron msn - chr3L 2576041 intron msn - chr3L 2576121 intron msn - chr3L_6_2575001 chr3L_2575001 RAL-409_125b 1396 chr3L 2609629 2609675 chr3L 2609754 2609776 8 120 7.5 1.0 4.2 1.5 147 chr3L 2609629 intron Pxn - chr3L 2609702 intron Pxn - chr3L 2609776 intron Pxn - chr3L_8_2605001 chr3L_2605001 RAL-409_125b 1397 chr3L 2617218 2617252 chr3L 2617353 2617387 8 135 8.5 10.0 9.2 0.8 169 chr3L 2617218 intron Pxn - chr3L 2617302 intron Pxn - chr3L 2617387 intron Pxn - chr3L_8_2615001 chr3L_2615001 RAL-409_125b 1398 chr3L 2682951 2682993 chr3L 2683079 2683121 14 127 11.0 10.0 10.5 1.2 170 chr3L 2682951 intron Fife - chr3L 2683036 intron Fife - chr3L 2683121 intron Fife - chr3L_14_2680001 chr3L_2680001 RAL-409_125b 1399 chr3L 2683926 2683975 chr3L 2684046 2684081 12 122 6.5 7.0 6.8 1.5 155 chr3L 2683926 intron Fife - chr3L 2684004 intron Fife - chr3L 2684081 intron Fife - chr3L_12_2680001 chr3L_2680001 RAL-409_125b 1400 chr3L 2719500 2719556 chr3L 2719652 2719708 13 150 8.5 6.0 7.2 1.6 208 chr3L 2719500 3` UTR Mrtf - chr3L 2719604 3` UTR Mrtf - chr3L 2719708 3` UTR Mrtf - chr3L_13_2715001 chr3L_2715001 RAL-409_125b 1401 chr3L 2751424 2751453 chr3L 2755769 2755798 F-element 8 4343 9.0 7.5 8.2 0.9 4374 chr3L 2751424 intron Mrtf - chr3L 2753611 intron Mrtf - chr3L 2755798 intron Mrtf - chr3L_8_2750001 chr3L_2750001 RAL-409_125b 1402 chr3L 2795673 2795747 chr3L 2795847 2795920 10 166 1.0 4.0 2.5 2.9 247 chr3L 2795673 intron CG43444 - chr3L 2795796 intron CG43444 - chr3L 2795920 intron CG43444 - chr3L_10_2795001 chr3L_2795001 RAL-409_125b 1403 chr3L 2854429 2854502 chr3L 2854557 2854587 13 112 4.5 1.5 3.0 3.2 158 chr3L 2854429 intron CG43444 - chr3L 2854508 intron CG43444 - chr3L 2854587 intron CG43444 - chr3L_13_2850001 chr3L_2850001 RAL-409_125b 1404 chr3L 2873089 2873121 chr3L 2873216 2873239 8 122 7.5 11.5 9.5 0.8 150 chr3L 2873089 intron CG43444 - chr3L 2873164 intron CG43444 - chr3L 2873239 intron CG43444 - chr3L_8_2870001 chr3L_2870001 RAL-409_125b 1405 chr3L 2873546 2873608 chr3L 2873676 2873727 19 127 6.5 5.0 5.8 2.8 181 chr3L 2873546 intron CG43444 - chr3L 2873636 intron CG43444 - chr3L 2873727 intron CG43444 - chr3L_19_2870001 chr3L_2870001 RAL-409_125b 1406 chr3L 2882074 2882130 chr3L 2882199 2882256 9 123 6.0 6.0 6.0 1.3 182 chr3L 2882074 intergenic not near genes chr3L 2882165 intergenic not near genes chr3L 2882256 intergenic not near genes chr3L_9_2880001 chr3L_2880001 RAL-409_125b 1407 chr3L 2927799 2927870 chr3L 2936126 2936176 Tirant 17 8323 3.5 5.5 4.5 3.1 8377 chr3L 2927799 intron Shab + chr3L 2931988 intron Shab + chr3L 2936176 intron Shab + chr3L_17_2930001 chr3L_2930001 RAL-409_125b 1408 chr3L 2966683 2966725 chr3L 2974160 2974205 mdg1 4 7478 4.0 0.0 2.0 1.3 7522 chr3L 2966683 intergenic not near genes chr3L 2970444 intergenic not near genes chr3L 2974205 intergenic not near genes chr3L_4_2970001 chr3L_2970001 RAL-409_125b 1409 chr3L 2974273 2974340 chr3L 2974404 2974461 9 117 4.0 9.0 6.5 1.2 188 chr3L 2974273 intergenic not near genes chr3L 2974367 intergenic not near genes chr3L 2974461 intergenic not near genes chr3L_9_2970001 chr3L_2970001 RAL-409_125b 1410 chr3L 3013409 3013476 chr3L 3013573 3013640 4 157 5.5 4.0 4.8 0.7 231 chr3L 3013409 intergenic not near genes chr3L 3013524 intergenic not near genes chr3L 3013640 intergenic not near genes chr3L_4_3010001 chr3L_3010001 RAL-409_125b 1411 chr3L 3028280 3028346 chr3L 3028467 3028528 13 181 5.5 7.0 6.2 1.8 248 chr3L 3028280 intergenic not near genes chr3L 3028404 intergenic not near genes chr3L 3028528 intergenic not near genes chr3L_13_3025001 chr3L_3025001 RAL-409_125b 1412 chr3L 3040282 3040352 chr3L 3042115 3042195 S-element 7 1840 2.0 0.5 1.2 3.2 1913 chr3L 3040282 3` UTR CG2162 + chr3L 3041238 intergenic not near genes chr3L 3042195 intergenic Jafrac2 + chr3L_7_3040001 chr3L_3040001 RAL-409_125b 1413 chr3L 3050863 3050917 chr3L 3051000 3051054 4 137 5.5 6.5 6.0 0.6 191 chr3L 3050863 intron CG32485 + chr3L 3050958 intron CG32485 + chr3L 3051054 exon CG32485 + chr3L_4_3050001 chr3L_3050001 RAL-409_125b 1414 chr3L 3051707 3051733 chr3L 3051988 3052028 pogo 6 290 8.5 4.0 6.2 0.8 321 chr3L 3051707 3` UTR CG32485 + chr3L 3051868 intergenic CG32485 + chr3L 3052028 intergenic CG32485 +,CG1271 + chr3L_6_3050001 chr3L_3050001 RAL-409_125b 1415 chr3L 3061249 3061307 chr3L 3069871 3069891 Tirant 10 8614 2.5 4.0 3.2 2.4 8642 chr3L 3061249 intron CG32486 - chr3L 3065570 intron CG32486 - chr3L 3069891 intron CG32486 - chr3L_10_3065001 chr3L_3065001 RAL-409_125b 1416 chr3L 3075907 3075941 chr3L 3076017 3076056 4 116 8.5 10.0 9.2 0.4 149 chr3L 3075907 intron CG11486 + chr3L 3075982 intron CG11486 + chr3L 3076056 intron CG11486 + chr3L_4_3075001 chr3L_3075001 RAL-409_125b 1417 chr3L 3102774 3102844 chr3L 3102910 3102970 16 124 8.5 6.5 7.5 1.9 196 chr3L 3102774 intron Cht7 - chr3L 3102872 intron Cht7 - chr3L 3102970 intron Cht7 - chr3L_16_3100001 chr3L_3100001 RAL-409_125b 1418 chr3L 3252297 3252374 chr3L 3252418 3252500 6 124 5.5 3.5 4.5 1.1 203 chr3L 3252297 5` UTR CR43626 + chr3L 3252398 5` UTR CR43626 + chr3L 3252500 5` UTR CR43626 + chr3L_6_3250001 chr3L_3250001 RAL-409_125b 1419 chr3L 3281431 3281469 chr3L 3281938 3282014 Doc 8 518 5.0 7.0 6.0 1.1 583 chr3L 3281431 intron CG12017 + chr3L 3281722 intron CG12017 + chr3L 3282014 intron CG12017 + chr3L_8_3280001 chr3L_3280001 RAL-409_125b 1420 chr3L 3284396 3284469 chr3L 3284530 3284597 19 126 3.5 7.0 5.2 3.1 201 chr3L 3284396 intron CG12017 + chr3L 3284496 intron CG12017 + chr3L 3284597 intron CG12017 + chr3L_19_3280001 chr3L_3280001 RAL-409_125b 1421 chr3L 3341231 3341291 chr3L 3341361 3341421 15 128 3.5 7.5 5.5 2.3 190 chr3L 3341231 intron kst + chr3L 3341326 intron kst + chr3L 3341421 intron kst + chr3L_15_3340001 chr3L_3340001 RAL-409_125b 1422 chr3L 3436244 3436310 chr3L 3436373 3436429 9 127 8.5 11.5 10.0 0.8 185 chr3L 3436244 intron eIF5B - chr3L 3436336 intron eIF5B - chr3L 3436429 intron eIF5B - chr3L_9_3435001 chr3L_3435001 RAL-409_125b 1423 chr3L 3449221 3449229 chr3L 3449349 3449357 6 127 3.5 4.5 4.0 1.2 136 chr3L 3449221 intron eIF5B - chr3L 3449289 intron eIF5B - chr3L 3449357 intron eIF5B - chr3L_6_3445001 chr3L_3445001 RAL-409_125b 1424 chr3L 3451331 3451397 chr3L 3451481 3451547 13 149 5.5 2.5 4.0 2.6 216 chr3L 3451331 intron eIF5B - chr3L 3451439 intron eIF5B - chr3L 3451547 intron eIF5B - chr3L_13_3450001 chr3L_3450001 RAL-409_125b 1425 chr3L 3475039 3475094 chr3L 3475533 3475563 jockey 11 484 4.5 4.0 4.2 2.1 524 chr3L 3475039 intron CG42324 + chr3L 3475301 intron CG42324 + chr3L 3475563 intron CG42324 + chr3L_11_3475001 chr3L_3475001 RAL-409_125b 1426 chr3L 3494149 3494204 chr3L 3494276 3494331 5 127 0.0 4.5 2.2 1.6 182 chr3L 3494149 intron CG42324 + chr3L 3494240 intron CG42324 + chr3L 3494331 intron CG42324 + chr3L_5_3490001 chr3L_3490001 RAL-409_125b 1427 chr3L 3494755 3494778 chr3L 3494883 3494900 7 126 9.5 11.5 10.5 0.6 145 chr3L 3494755 intron CG42324 + chr3L 3494828 intron CG42324 + chr3L 3494900 intron CG42324 + chr3L_7_3490001 chr3L_3490001 RAL-409_125b 1428 chr3L 3526479 3526523 chr3L 3526985 3527029 10 505 7.5 9.5 8.5 1.1 550 chr3L 3526479 intron Eip63E + chr3L 3526754 intron Eip63E + chr3L 3527029 intron Eip63E + chr3L_10_3525001 chr3L_3525001 RAL-409_125b 1429 chr3L 3530674 3530725 chr3L 3530782 3530853 4 123 5.5 7.0 6.2 0.6 179 chr3L 3530674 intron Eip63E + chr3L 3530764 intron Eip63E + chr3L 3530853 intron Eip63E + chr3L_4_3530001 chr3L_3530001 RAL-409_125b 1430 chr3L 3581733 3581771 chr3L 3581866 3581901 5 132 8.0 1.5 4.8 0.9 168 chr3L 3581733 intron Eip63E + chr3L 3581817 intron Eip63E + chr3L 3581901 intron Eip63E + chr3L_5_3580001 chr3L_3580001 RAL-409_125b 1431 chr3L 3601259 3601329 chr3L 3606620 3606685 copia 19 5359 2.0 7.5 4.8 3.3 5426 chr3L 3601259 intron Eip63E + chr3L 3603972 intron Eip63E + chr3L 3606685 intron Eip63E + chr3L_19_3600001 chr3L_3600001 RAL-409_125b 1432 chr3L 3627186 3627361 chr3L 3627341 3627514 22 152 5.0 2.0 3.5 4.9 328 chr3L 3627186 intron dar1 + chr3L 3627350 intron dar1 + chr3L 3627514 intron dar1 + chr3L_22_3625001 chr3L_3625001 RAL-409_125b 1433 chr3L 3640709 3640775 chr3L 3640874 3640941 13 163 6.0 3.5 4.8 2.2 232 chr3L 3640709 intron dar1 + chr3L 3640825 intron dar1 + chr3L 3640941 intron dar1 + chr3L_13_3640001 chr3L_3640001 RAL-409_125b 1434 chr3L 3783204 3783281 chr3L 3783331 3783406 9 125 5.5 3.5 4.5 1.6 202 chr3L 3783204 intron CG32264 - chr3L 3783305 intron CG32264 - chr3L 3783406 intron CG32264 - chr3L_9_3780001 chr3L_3780001 RAL-409_125b 1435 chr3L 3798008 3798056 chr3L 3798139 3798181 7 126 15.0 7.0 11.0 0.6 173 chr3L 3798008 intron CG32264 - chr3L 3798094 intron CG32264 - chr3L 3798181 intron CG32264 - chr3L_7_3795001 chr3L_3795001 RAL-409_125b 1436 chr3L 3802908 3802977 chr3L 3803041 3803084 19 125 8.0 6.5 7.2 2.3 176 chr3L 3802908 intron CG32264 - chr3L 3802996 intron CG32264 - chr3L 3803084 intron CG32264 - chr3L_19_3800001 chr3L_3800001 RAL-409_125b 1437 chr3L 3815003 3815073 chr3L 3815134 3815204 8 122 3.0 4.5 3.8 1.7 201 chr3L 3815003 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815104 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815204 intron,3` UTR Scsalpha +,CR43932 - chr3L_8_3815001 chr3L_3815001 RAL-409_125b 1438 chr3L 3833703 3833719 chr3L 3833994 3834010 pogo 4 290 9.5 7.5 8.5 0.4 307 chr3L 3833703 intron enc + chr3L 3833856 intron enc + chr3L 3834010 intron enc + chr3L_4_3830001 chr3L_3830001 RAL-409_125b 1439 chr3L 3890922 3890955 chr3L 3891043 3891086 6 127 9.0 2.5 5.8 0.9 164 chr3L 3890922 intergenic not near genes chr3L 3891004 intergenic not near genes chr3L 3891086 intergenic not near genes chr3L_6_3890001 chr3L_3890001 RAL-409_125b 1440 chr3L 3935802 3935825 chr3L 3935930 3935948 8 127 0.5 2.5 1.5 3.2 146 chr3L 3935802 5` UTR Eip63F-2 + chr3L 3935875 5` UTR Eip63F-2 + chr3L 3935948 5` UTR Eip63F-2 + chr3L_8_3935001 chr3L_3935001 RAL-409_125b 1441 chr3L 4099436 4099490 chr3L 4099567 4099621 12 130 6.5 1.0 3.8 2.5 185 chr3L 4099436 intron CG14995 - chr3L 4099528 intron CG14995 - chr3L 4099621 intron CG14995 - chr3L_12_4095001 chr3L_4095001 RAL-409_125b 1442 chr3L 4146806 4146833 chr3L 4146938 4146965 5 132 0.0 8.0 4.0 1.0 159 chr3L 4146806 intergenic not near genes chr3L 4146886 intergenic not near genes chr3L 4146965 intergenic not near genes chr3L_5_4145001 chr3L_4145001 RAL-409_125b 1443 chr3L 4170118 4170158 chr3L 4170240 4170286 6 126 5.0 3.5 4.2 1.2 168 chr3L 4170118 intergenic Ero1L + chr3L 4170202 intergenic Ero1L + chr3L 4170286 intergenic Ero1L + chr3L_6_4170001 chr3L_4170001 RAL-409_125b 1444 chr3L 4214490 4214531 chr3L 4214682 4214723 12 186 7.0 6.5 6.8 1.5 233 chr3L 4214490 intron CG43367 + chr3L 4214606 intron CG43367 + chr3L 4214723 intron CG43367 + chr3L_12_4210001 chr3L_4210001 RAL-409_125b 1445 chr3L 4229716 4229722 chr3L 4229831 4229855 4 124 11.0 5.0 8.0 0.4 139 chr3L 4229716 intron ImpL2 - chr3L 4229786 intron ImpL2 - chr3L 4229855 intron ImpL2 - chr3L_4_4225001 chr3L_4225001 RAL-409_125b 1446 chr3L 4229723 4229759 chr3L 4229826 4229894 8 127 6.0 4.0 5.0 1.3 171 chr3L 4229723 intron ImpL2 - chr3L 4229808 intron ImpL2 - chr3L 4229894 intron ImpL2 - chr3L_8_4225001 chr3L_4225001 RAL-409_125b 1447 chr3L 4306946 4306974 chr3L 4307089 4307117 4 143 11.5 2.5 7.0 0.5 171 chr3L 4306946 intron dyl - chr3L 4307032 intron dyl - chr3L 4307117 intron dyl - chr3L_4_4305001 chr3L_4305001 RAL-409_125b 1448 chr3L 4328695 4328746 chr3L 4336243 4336294 412 12 7546 5.0 6.5 5.8 1.8 7599 chr3L 4328695 intron Cip4 - chr3L 4332494 intron Cip4 - chr3L 4336294 exon Cip4 - chr3L_12_4330001 chr3L_4330001 RAL-409_125b 1449 chr3L 4356250 4356292 chr3L 4356369 4356423 13 125 10.5 2.5 6.5 1.7 173 chr3L 4356250 intron Cip4 - chr3L 4356336 intron Cip4 - chr3L 4356423 intron Cip4 - chr3L_13_4355001 chr3L_4355001 RAL-409_125b 1450 chr3L 4423370 4423437 chr3L 4423500 4423562 14 119 8.5 9.0 8.8 1.4 192 chr3L 4423370 intron CG15020 + chr3L 4423466 intron CG15020 + chr3L 4423562 intron CG15020 + chr3L_14_4420001 chr3L_4420001 RAL-409_125b 1451 chr3L 4446177 4446230 chr3L 4446311 4446366 11 132 3.5 7.5 5.5 1.7 189 chr3L 4446177 3` UTR CR45739 - chr3L 4446272 3` UTR CR45739 - chr3L 4446366 3` UTR CR45739 - chr3L_11_4445001 chr3L_4445001 RAL-409_125b 1452 chr3L 4519375 4519411 chr3L 4519502 4519531 10 126 10.0 0.5 5.2 1.6 156 chr3L 4519375 intron Tie - chr3L 4519453 intron Tie - chr3L 4519531 intron Tie - chr3L_10_4515001 chr3L_4515001 RAL-409_125b 1453 chr3L 4532247 4532298 chr3L 4532376 4532434 11 131 4.5 8.5 6.5 1.5 187 chr3L 4532247 intergenic Tie - chr3L 4532340 intergenic Tie - chr3L 4532434 intergenic Tie - chr3L_11_4530001 chr3L_4530001 RAL-409_125b 1454 chr3L 4652537 4652598 chr3L 4652655 4652727 9 129 3.5 3.5 3.5 2.0 190 chr3L 4652537 intron axo - chr3L 4652632 intron axo - chr3L 4652727 intron axo - chr3L_9_4650001 chr3L_4650001 RAL-409_125b 1455 chr3L 4668610 4668649 chr3L 4668758 4668812 9 147 4.5 6.5 5.5 1.4 202 chr3L 4668610 intron axo - chr3L 4668711 intron axo - chr3L 4668812 intron axo - chr3L_9_4665001 chr3L_4665001 RAL-409_125b 1456 chr3L 4699253 4699316 chr3L 4699383 4699446 11 128 5.5 6.0 5.8 1.6 193 chr3L 4699253 intron RhoGEF64C + chr3L 4699350 intron RhoGEF64C + chr3L 4699446 intron RhoGEF64C + chr3L_11_4695001 chr3L_4695001 RAL-409_125b 1457 chr3L 4837487 4837554 chr3L 4837642 4837702 13 147 4.5 7.0 5.8 1.9 215 chr3L 4837487 intergenic CG13707 - chr3L 4837594 intergenic CG13707 - chr3L 4837702 intergenic CG13707 - chr3L_13_4835001 chr3L_4835001 RAL-409_125b 1458 chr3L 4837846 4837909 chr3L 4837975 4838013 11 125 6.5 6.0 6.2 1.5 167 chr3L 4837846 3` UTR CG13707 - chr3L 4837930 3` UTR CG13707 - chr3L 4838013 3` UTR CG13707 - chr3L_11_4835001 chr3L_4835001 RAL-409_125b 1459 chr3L 4840360 4840412 chr3L 4840500 4840571 9 156 2.0 2.0 2.0 3.0 211 chr3L 4840360 intergenic CG13707 - chr3L 4840466 intergenic CG13707 - chr3L 4840571 intergenic CG13707 - chr3L_9_4840001 chr3L_4840001 RAL-409_125b 1460 chr3L 4858259 4858320 chr3L 4858399 4858460 22 134 5.5 5.0 5.2 3.5 201 chr3L 4858259 intergenic not near genes chr3L 4858360 intergenic not near genes chr3L 4858460 intergenic not near genes chr3L_22_4855001 chr3L_4855001 RAL-409_125b 1461 chr3L 4901096 4901128 chr3L 4907336 4907368 diver 11 6238 9.0 10.5 9.8 1.0 6272 chr3L 4901096 intergenic CG13704 + chr3L 4904232 intergenic not near genes chr3L 4907368 intergenic not near genes chr3L_11_4900001 chr3L_4900001 RAL-409_125b 1462 chr3L 4958387 4958412 chr3L 4958524 4958540 4 135 10.0 8.0 9.0 0.4 153 chr3L 4958387 intron Con - chr3L 4958464 intron Con - chr3L 4958540 intron Con - chr3L_4_4955001 chr3L_4955001 RAL-409_125b 1463 chr3L 4958416 4958445 chr3L 4958513 4958563 11 116 8.0 7.0 7.5 1.3 147 chr3L 4958416 intron Con - chr3L 4958490 intron Con - chr3L 4958563 intron Con - chr3L_11_4955001 chr3L_4955001 RAL-409_125b 1464 chr3L 4959608 4959617 chr3L 4960103 4960118 4 500 1.0 6.0 3.5 0.9 510 chr3L 4959608 intron Con - chr3L 4959863 intron Con - chr3L 4960118 intron Con - chr3L_4_4955001 chr3L_4955001 RAL-409_125b 1465 chr3L 5034118 5034178 chr3L 5043320 5043373 roo 8 9199 5.0 3.5 4.2 1.5 9255 chr3L 5034118 intron Con - chr3L 5038746 intron Con - chr3L 5043373 intron Con - chr3L_8_5035001 chr3L_5035001 RAL-409_125b 1466 chr3L 5045419 5045484 chr3L 5050250 5050315 Doc 7 4831 5.0 3.0 4.0 1.4 4896 chr3L 5045419 5` UTR Con - chr3L 5047867 intron Con - chr3L 5050315 intron Con - chr3L_7_5045001 chr3L_5045001 RAL-409_125b 1467 chr3L 5089054 5089127 chr3L 5089191 5089254 7 130 1.5 4.0 2.8 1.8 200 chr3L 5089054 intergenic not near genes chr3L 5089154 intergenic not near genes chr3L 5089254 intergenic not near genes chr3L_7_5085001 chr3L_5085001 RAL-409_125b 1468 chr3L 5103566 5103580 chr3L 5103693 5103710 6 128 12.5 0.0 6.2 0.8 144 chr3L 5103566 intergenic not near genes chr3L 5103638 intergenic not near genes chr3L 5103710 intergenic not near genes chr3L_6_5100001 chr3L_5100001 RAL-409_125b 1469 chr3L 5104442 5104510 chr3L 5124620 5124646 13 20176 4.5 5.0 4.8 2.2 20204 chr3L 5104442 intergenic not near genes chr3L 5114544 intergenic not near genes chr3L 5124646 intergenic not near genes chr3L_13_5110001 chr3L_5110001 RAL-409_125b 1470 chr3L 5130879 5130919 chr3L 5131032 5131046 10 147 5.5 3.5 4.5 1.8 167 chr3L 5130879 intergenic not near genes chr3L 5130962 intergenic not near genes chr3L 5131046 intergenic CG15212 + chr3L_10_5130001 chr3L_5130001 RAL-409_125b 1471 chr3L 5212196 5212265 chr3L 5212329 5212398 20 128 5.0 7.0 6.0 2.9 202 chr3L 5212196 intron shep - chr3L 5212297 intron shep - chr3L 5212398 intron shep - chr3L_20_5210001 chr3L_5210001 RAL-409_125b 1472 chr3L 5261131 5261174 chr3L 5261250 5261297 8 124 4.5 2.0 3.2 1.9 166 chr3L 5261131 intron shep - chr3L 5261214 intron shep - chr3L 5261297 intron shep - chr3L_8_5260001 chr3L_5260001 RAL-409_125b 1473 chr3L 5291677 5291699 chr3L 5291773 5291802 5 107 8.5 5.0 6.8 0.6 125 chr3L 5291677 intergenic not near genes chr3L 5291740 intergenic not near genes chr3L 5291802 intergenic not near genes chr3L_5_5290001 chr3L_5290001 RAL-409_125b 1474 chr3L 5327420 5327478 chr3L 5327555 5327613 14 133 5.0 7.5 6.2 1.9 193 chr3L 5327420 intergenic not near genes chr3L 5327516 intergenic not near genes chr3L 5327613 intergenic not near genes chr3L_14_5325001 chr3L_5325001 RAL-409_125b 1475 chr3L 5376011 5376041 chr3L 5376140 5376169 9 127 1.5 4.0 2.8 2.4 158 chr3L 5376011 intergenic not near genes chr3L 5376090 intergenic not near genes chr3L 5376169 intergenic not near genes chr3L_9_5375001 chr3L_5375001 RAL-409_125b 1476 chr3L 5396422 5396443 chr3L 5396558 5396579 9 135 3.0 0.0 1.5 3.6 157 chr3L 5396422 intergenic not near genes chr3L 5396500 intergenic not near genes chr3L 5396579 intergenic not near genes chr3L_9_5395001 chr3L_5395001 RAL-409_125b 1477 chr3L 5476142 5476208 chr3L 5476259 5476321 11 121 9.0 8.5 8.8 1.1 179 chr3L 5476142 intergenic not near genes chr3L 5476232 intergenic not near genes chr3L 5476321 intergenic not near genes chr3L_11_5475001 chr3L_5475001 RAL-409_125b 1478 chr3L 5516391 5516421 chr3L 5516520 5516566 5 138 8.0 6.0 7.0 0.6 175 chr3L 5516391 intron Lkr - chr3L 5516478 intron Lkr - chr3L 5516566 intron Lkr - chr3L_5_5515001 chr3L_5515001 RAL-409_125b 1479 chr3L 5531150 5531227 chr3L 5531281 5531358 15 124 2.0 2.5 2.2 4.7 208 chr3L 5531150 intergenic not near genes chr3L 5531254 intergenic not near genes chr3L 5531358 intergenic not near genes chr3L_15_5530001 chr3L_5530001 RAL-409_125b 1480 chr3L 5537681 5537744 chr3L 5538073 5538130 jockey 16 383 5.0 6.0 5.5 2.5 449 chr3L 5537681 intergenic not near genes chr3L 5537906 intergenic not near genes chr3L 5538130 intergenic CG10625 - chr3L_16_5535001 chr3L_5535001 RAL-409_125b 1481 chr3L 5597790 5597830 chr3L 5597920 5597960 5 127 3.5 1.0 2.2 1.6 170 chr3L 5597790 intergenic CG5150 + chr3L 5597875 intergenic CG5150 + chr3L 5597960 intergenic not near genes chr3L_5_5595001 chr3L_5595001 RAL-409_125b 1482 chr3L 5613448 5613502 chr3L 5613625 5613679 6 174 1.5 3.0 2.2 1.9 231 chr3L 5613448 intergenic not near genes chr3L 5613564 intergenic not near genes chr3L 5613679 intergenic not near genes chr3L_6_5610001 chr3L_5610001 RAL-409_125b 1483 chr3L 5729703 5729765 chr3L 5729830 5729895 14 133 2.0 6.5 4.2 2.7 192 chr3L 5729703 intron sif + chr3L 5729799 intron sif + chr3L 5729895 intron sif + chr3L_14_5725001 chr3L_5725001 RAL-409_125b 1484 chr3L 5908055 5908107 chr3L 5908185 5908237 14 129 0.5 5.5 3.0 3.5 182 chr3L 5908055 intron CG13288 + chr3L 5908146 intron CG13288 + chr3L 5908237 intron CG13288 + chr3L_14_5905001 chr3L_5905001 RAL-409_125b 1485 chr3L 5909988 5910052 chr3L 5910279 5910343 pogo 14 290 7.0 5.0 6.0 2.0 355 chr3L 5909988 intron CG13288 + chr3L 5910166 intron CG13288 + chr3L 5910343 intron CG13288 + chr3L_14_5910001 chr3L_5910001 RAL-409_125b 1486 chr3L 5926276 5926347 chr3L 5926508 5926588 BS 9 230 3.5 6.5 5.0 1.5 312 chr3L 5926276 intron Vap-33B + chr3L 5926432 intron Vap-33B + chr3L 5926588 intron Vap-33B + chr3L_9_5925001 chr3L_5925001 RAL-409_125b 1487 chr3L 5957534 5957598 chr3L 5957661 5957725 15 123 3.5 6.5 5.0 2.5 191 chr3L 5957534 intergenic not near genes chr3L 5957630 intergenic not near genes chr3L 5957725 intergenic not near genes chr3L_15_5955001 chr3L_5955001 RAL-409_125b 1488 chr3L 5992573 5992590 chr3L 5992725 5992732 4 150 11.0 7.5 9.2 0.4 159 chr3L 5992573 intergenic not near genes chr3L 5992652 intergenic not near genes chr3L 5992732 intergenic not near genes chr3L_4_5990001 chr3L_5990001 RAL-409_125b 1489 chr3L 5992600 5992621 chr3L 5992698 5992768 4 137 7.0 5.0 6.0 0.6 168 chr3L 5992600 intergenic not near genes chr3L 5992684 intergenic not near genes chr3L 5992768 intergenic not near genes chr3L_4_5990001 chr3L_5990001 RAL-409_125b 1490 chr3L 6001644 6001716 chr3L 6004387 6004466 jockey 15 2748 6.5 0.5 3.5 3.3 2822 chr3L 6001644 intron PVRAP + chr3L 6003055 intron PVRAP + chr3L 6004466 intron PVRAP + chr3L_15_6000001 chr3L_6000001 RAL-409_125b 1491 chr3L 6040317 6040380 chr3L 6042723 6042776 Doc 16 2403 10.5 3.5 7.0 2.0 2459 chr3L 6040317 intergenic Jon65Aiv + chr3L 6041546 intergenic not near genes chr3L 6042776 intergenic not near genes chr3L_16_6040001 chr3L_6040001 RAL-409_125b 1492 chr3L 6052636 6052649 chr3L 6052746 6052774 4 115 11.0 5.5 8.2 0.4 138 chr3L 6052636 exon Jon65Aii + chr3L 6052705 intron Jon65Aii + chr3L 6052774 exon Jon65Aii + chr3L_4_6050001 chr3L_6050001 RAL-409_125b 1493 chr3L 2182156 2182158 chr3L 6061841 6061843 5 3879685 14.5 16.0 15.2 0.3 3879687 chr3L 2182156 intergenic not near genes chr3L 4122000 intron Chd64 - chr3L 6061843 intron CG10472 - chr3L_5_4120001 chr3L_4120001 RAL-409_125b 1494 chr3L 6064964 6065026 chr3L 6065090 6065153 11 126 3.5 3.5 3.5 2.4 189 chr3L 6064964 intergenic not near genes chr3L 6065058 intergenic not near genes chr3L 6065153 intergenic not near genes chr3L_11_6065001 chr3L_6065001 RAL-409_125b 1495 chr3L 6119124 6119157 chr3L 6119251 6119284 5 126 6.5 4.5 5.5 0.8 160 chr3L 6119124 exon Ets65A + chr3L 6119204 intron Ets65A + chr3L 6119284 intron Ets65A + chr3L_5_6115001 chr3L_6115001 RAL-409_125b 1496 chr3L 6124467 6124516 chr3L 6124630 6124641 4 152 11.5 4.5 8.0 0.4 174 chr3L 6124467 exon l(3)mbn - chr3L 6124554 exon l(3)mbn - chr3L 6124641 exon l(3)mbn - chr3L_4_6120001 chr3L_6120001 RAL-409_125b 1497 chr3L 6142467 6142521 chr3L 6142728 6142776 12 251 7.5 7.5 7.5 1.4 309 chr3L 6142467 intergenic Cpr65Aw - chr3L 6142622 intergenic Cpr65Aw - chr3L 6142776 intergenic Cpr65Aw - chr3L_12_6140001 chr3L_6140001 RAL-409_125b 1498 chr3L 6155671 6155708 chr3L 6155807 6155844 18 135 5.5 1.0 3.2 4.3 173 chr3L 6155671 intergenic CR45421 - chr3L 6155758 intergenic not near genes chr3L 6155844 intergenic not near genes chr3L_18_6155001 chr3L_6155001 RAL-409_125b 1499 chr3L 6220869 6220936 chr3L 6230071 6230138 roo 14 9197 9.0 5.5 7.2 1.7 9269 chr3L 6220869 5` UTR pncr008:3L + chr3L 6225504 intergenic not near genes chr3L 6230138 intergenic not near genes chr3L_14_6225001 chr3L_6225001 RAL-409_125b 1500 chr3L 6263076 6263098 chr3L 6263162 6263171 4 100 9.5 7.0 8.2 0.4 95 chr3L 6263076 3` UTR CR44522 - chr3L 6263124 3` UTR CR44522 - chr3L 6263171 3` UTR CR44522 - chr3L_4_6260001 chr3L_6260001 RAL-409_125b 1501 chr3L 6287958 6288025 chr3L 6288283 6288351 14 322 9.5 7.5 8.5 1.5 393 chr3L 6287958 intergenic not near genes chr3L 6288154 intergenic not near genes chr3L 6288351 intergenic not near genes chr3L_14_6285001 chr3L_6285001 RAL-409_125b 1502 chr3L 6334969 6335034 chr3L 6335480 6335555 297 18 520 6.0 4.0 5.0 3.0 586 chr3L 6334969 intron CG13300 - chr3L 6335262 intron CG13300 - chr3L 6335555 intron CG13300 - chr3L_18_6335001 chr3L_6335001 RAL-409_125b 1503 chr3L 6369716 6369764 chr3L 6369870 6369918 5 152 7.5 0.0 3.8 1.0 202 chr3L 6369716 intergenic CR45419 - chr3L 6369817 intergenic CR45419 - chr3L 6369918 intergenic CR45419 - chr3L_5_6365001 chr3L_6365001 RAL-409_125b 1504 chr3L 6405619 6405685 chr3L 6432128 6432162 roo 17 26510 1.5 5.0 3.2 4.0 26543 chr3L 6405619 intron CG42747 + chr3L 6418890 intron CG42747 + chr3L 6432162 intron CG42747 + chr3L_17_6415001 chr3L_6415001 RAL-409_125b 1505 chr3L 6491042 6491085 chr3L 6491166 6491213 11 128 7.0 4.5 5.8 1.6 171 chr3L 6491042 exon CG8270 + chr3L 6491128 3` UTR CG8270 + chr3L 6491213 intergenic CG8270 +,CG10144 - chr3L_11_6490001 chr3L_6490001 RAL-409_125b 1506 chr3L 6500378 6500435 chr3L 6500529 6500583 8 152 6.5 6.0 6.2 1.1 205 chr3L 6500378 intron sfl + chr3L 6500480 intron sfl + chr3L 6500583 intron sfl + chr3L_8_6500001 chr3L_6500001 RAL-409_125b 1507 chr3L 6604289 6604295 chr3L 6604416 6604419 5 126 2.5 18.0 10.2 0.4 130 chr3L 6604289 intron CG8368 + chr3L 6604354 intron CG8368 + chr3L 6604419 intron,3` UTR CG8368 +,zpg - chr3L_5_6600001 chr3L_6600001 RAL-409_125b 1508 chr3L 6620570 6620599 chr3L 6621055 6621082 Rt1c 10 486 4.5 10.5 7.5 1.2 512 chr3L 6620570 intergenic not near genes chr3L 6620826 intergenic not near genes chr3L 6621082 intergenic not near genes chr3L_10_6620001 chr3L_6620001 RAL-409_125b 1509 chr3L 6654209 6654245 chr3L 6654467 6654524 13 279 6.5 6.5 6.5 1.7 315 chr3L 6654209 intergenic not near genes chr3L 6654366 intergenic not near genes chr3L 6654524 intergenic not near genes chr3L_13_6650001 chr3L_6650001 RAL-409_125b 1510 chr3L 6765781 6765831 chr3L 6765918 6765967 12 133 8.0 5.5 6.8 1.5 186 chr3L 6765781 intergenic not near genes chr3L 6765874 intergenic not near genes chr3L 6765967 intergenic not near genes chr3L_12_6765001 chr3L_6765001 RAL-409_125b 1511 chr3L 6781083 6781148 chr3L 6783146 6783208 Doc 9 2061 7.0 0.0 3.5 2.0 2125 chr3L 6781083 intergenic not near genes chr3L 6782146 intergenic not near genes chr3L 6783208 intergenic not near genes chr3L_9_6780001 chr3L_6780001 RAL-409_125b 1512 chr3L 6811906 6811911 chr3L 6812032 6812037 4 126 1.5 6.0 3.8 0.8 131 chr3L 6811906 intergenic not near genes chr3L 6811972 intergenic not near genes chr3L 6812037 intergenic not near genes chr3L_4_6810001 chr3L_6810001 RAL-409_125b 1513 chr3L 6820605 6820619 chr3L 6820738 6820750 4 132 3.5 7.5 5.5 0.6 145 chr3L 6820605 intergenic not near genes chr3L 6820678 intergenic not near genes chr3L 6820750 intergenic not near genes chr3L_4_6820001 chr3L_6820001 RAL-409_125b 1514 chr3L 6835890 6835921 chr3L 6836013 6836049 8 125 3.5 5.5 4.5 1.5 159 chr3L 6835890 intergenic not near genes chr3L 6835970 intergenic not near genes chr3L 6836049 intergenic not near genes chr3L_8_6835001 chr3L_6835001 RAL-409_125b 1515 chr3L 6844321 6844383 chr3L 6844514 6844579 9 196 3.5 2.0 2.8 2.4 258 chr3L 6844321 intergenic not near genes chr3L 6844450 intergenic not near genes chr3L 6844579 intergenic not near genes chr3L_9_6840001 chr3L_6840001 RAL-409_125b 1516 chr3L 6855883 6855941 chr3L 6860717 6860760 Doc 11 4823 4.5 3.0 3.8 2.3 4877 chr3L 6855883 intergenic not near genes chr3L 6858322 intergenic not near genes chr3L 6860760 intergenic not near genes chr3L_11_6855001 chr3L_6855001 RAL-409_125b 1517 chr3L 6887476 6887537 chr3L 6895018 6895079 roo 19 7540 4.5 4.0 4.2 3.7 7603 chr3L 6887476 intergenic not near genes chr3L 6891278 intergenic not near genes chr3L 6895079 intergenic not near genes chr3L_19_6890001 chr3L_6890001 RAL-409_125b 1518 chr3L 6974444 6974506 chr3L 6974594 6974652 6 149 7.0 6.5 6.8 0.8 208 chr3L 6974444 exon Galphai - chr3L 6974548 intron Galphai - chr3L 6974652 intron Galphai - chr3L_6_6970001 chr3L_6970001 RAL-409_125b 1519 chr3L 6990678 6990744 chr3L 6990808 6990864 7 126 6.0 5.0 5.5 1.1 186 chr3L 6990678 5` UTR bin + chr3L 6990771 5` UTR bin + chr3L 6990864 exon bin + chr3L_7_6990001 chr3L_6990001 RAL-409_125b 1520 chr3L 7001939 7001973 chr3L 7002110 7002144 7 169 5.5 8.5 7.0 0.9 205 chr3L 7001939 intron Mp + chr3L 7002042 intron Mp + chr3L 7002144 intron Mp + chr3L_7_7000001 chr3L_7000001 RAL-409_125b 1521 chr3L 7022016 7022052 chr3L 7022266 7022310 10 256 1.5 10.5 6.0 1.4 294 chr3L 7022016 intron Mp + chr3L 7022163 intron Mp + chr3L 7022310 intron Mp + chr3L_10_7020001 chr3L_7020001 RAL-409_125b 1522 chr3L 7033181 7033200 chr3L 7033251 7033325 6 116 2.0 7.0 4.5 1.1 144 chr3L 7033181 intron Mp + chr3L 7033253 intron Mp + chr3L 7033325 intron Mp + chr3L_6_7030001 chr3L_7030001 RAL-409_125b 1523 chr3L 7067093 7067165 chr3L 7067326 7067398 22 230 5.0 4.5 4.8 3.8 305 chr3L 7067093 intron,intron CG8641 -,CG14823 + chr3L 7067246 intron,intron CG8641 -,CG14823 + chr3L 7067398 intron,intron CG8641 -,CG14823 + chr3L_22_7065001 chr3L_7065001 RAL-409_125b 1524 chr3L 7129908 7129934 chr3L 7130150 7130166 BS 9 241 0.5 4.5 2.5 2.6 258 chr3L 7129908 intergenic CG15829 + chr3L 7130037 intergenic CG15829 + chr3L 7130166 intergenic CG15829 + chr3L_9_7130001 chr3L_7130001 RAL-409_125b 1525 chr3L 7258878 7258932 chr3L 7259068 7259122 9 189 4.0 4.5 4.2 1.7 244 chr3L 7258878 intron CG14830 - chr3L 7259000 intron CG14830 - chr3L 7259122 intron CG14830 - chr3L_9_7255001 chr3L_7255001 RAL-409_125b 1526 chr3L 7264825 7264883 chr3L 7264971 7265016 4 136 0.5 2.0 1.2 1.8 191 chr3L 7264825 intergenic not near genes chr3L 7264920 intergenic not near genes chr3L 7265016 intergenic not near genes chr3L_4_7260001 chr3L_7260001 RAL-409_125b 1527 chr3L 7377285 7377341 chr3L 7380429 7380496 297 12 3153 4.0 6.0 5.0 2.0 3211 chr3L 7377285 intron SMSr - chr3L 7378890 intron SMSr - chr3L 7380496 intron SMSr - chr3L_12_7375001 chr3L_7375001 RAL-409_125b 1528 chr3L 7498749 7498764 chr3L 7503544 7503560 F-element 5 4814 5.5 6.0 5.8 0.7 4811 chr3L 7498749 5` UTR CG8539 - chr3L 7501154 intergenic not near genes chr3L 7503560 intergenic not near genes chr3L_5_7500001 chr3L_7500001 RAL-409_125b 1529 chr3L 7508643 7508700 chr3L 7508777 7508829 7 131 7.0 0.5 3.8 1.5 186 chr3L 7508643 intergenic not near genes chr3L 7508736 intergenic not near genes chr3L 7508829 intergenic not near genes chr3L_7_7505001 chr3L_7505001 RAL-409_125b 1530 chr3L 7524129 7524155 chr3L 7524276 7524302 6 147 11.5 4.5 8.0 0.7 173 chr3L 7524129 intron ltl + chr3L 7524216 intron ltl + chr3L 7524302 intron ltl + chr3L_6_7520001 chr3L_7520001 RAL-409_125b 1531 chr3L 7581590 7581647 chr3L 7581711 7581781 6 124 5.5 4.0 4.8 1.0 191 chr3L 7581590 intergenic not near genes chr3L 7581686 intergenic not near genes chr3L 7581781 intergenic not near genes chr3L_6_7580001 chr3L_7580001 RAL-409_125b 1532 chr3L 7591119 7591177 chr3L 7591239 7591313 13 110 2.0 5.5 3.8 2.7 194 chr3L 7591119 intergenic CG7716 - chr3L 7591216 intergenic CG7716 - chr3L 7591313 intergenic CG7716 - chr3L_13_7590001 chr3L_7590001 RAL-409_125b 1533 chr3L 7711778 7711854 chr3L 7711905 7711978 12 121 3.0 5.5 4.2 2.3 200 chr3L 7711778 intron,intron CG32373 +,Ank2 - chr3L 7711878 intron,intron CG32373 +,Ank2 - chr3L 7711978 intron,intron CG32373 +,Ank2 - chr3L_12_7710001 chr3L_7710001 RAL-409_125b 1534 chr3L 7752130 7752148 chr3L 7752260 7752260 5 138 9.0 8.0 8.5 0.5 130 chr3L 7752130 intron CG32373 + chr3L 7752195 intron CG32373 + chr3L 7752260 intron CG32373 + chr3L_5_7750001 chr3L_7750001 RAL-409_125b 1535 chr3L 7793697 7793733 chr3L 7800799 7800835 297 11 7101 4.5 9.5 7.0 1.4 7138 chr3L 7793697 intron CG32369 - chr3L 7797266 intron CG32369 - chr3L 7800835 intron CG32369 - chr3L_11_7795001 chr3L_7795001 RAL-409_125b 1536 chr3L 7843122 7843188 chr3L 7843264 7843264 10 132 0.0 4.5 2.2 3.1 142 chr3L 7843122 intron Pdp1 - chr3L 7843193 intron Pdp1 - chr3L 7843264 intron Pdp1 - chr3L_10_7840001 chr3L_7840001 RAL-409_125b 1537 chr3L 7845345 7845408 chr3L 7845478 7845540 5 133 8.5 5.5 7.0 0.6 195 chr3L 7845345 intron Pdp1 - chr3L 7845442 intron Pdp1 - chr3L 7845540 intron Pdp1 - chr3L_5_7845001 chr3L_7845001 RAL-409_125b 1538 chr3L 7882142 7882178 chr3L 7882276 7882313 9 139 0.5 10.0 5.2 1.5 171 chr3L 7882142 intron CG32365 + chr3L 7882228 intron CG32365 + chr3L 7882313 intron CG32365 + chr3L_9_7880001 chr3L_7880001 RAL-409_125b 1539 chr3L 7886488 7886541 chr3L 7889045 7889103 Stalker4 18 2563 4.0 4.0 4.0 3.6 2615 chr3L 7886488 intron CG32365 + chr3L 7887796 intron CG32365 + chr3L 7889103 intron CG32365 + chr3L_18_7885001 chr3L_7885001 RAL-409_125b 1540 chr3L 7908667 7908723 chr3L 7909091 7909147 14 422 11.0 7.0 9.0 1.4 480 chr3L 7908667 intron pbl - chr3L 7908907 intron pbl - chr3L 7909147 intron pbl - chr3L_14_7905001 chr3L_7905001 RAL-409_125b 1541 chr3L 7916791 7916844 chr3L 7926012 7926065 roo 12 9220 7.0 4.0 5.5 1.8 9274 chr3L 7916791 3` UTR syd - chr3L 7921428 intron syd - chr3L 7926065 3` UTR syd - chr3L_12_7920001 chr3L_7920001 RAL-409_125b 1542 chr3L 7985332 7985386 chr3L 7987699 7987764 NOF 10 2376 6.0 5.5 5.8 1.5 2432 chr3L 7985332 intron nmo + chr3L 7986548 intron nmo + chr3L 7987764 intron nmo + chr3L_10_7985001 chr3L_7985001 RAL-409_125b 1543 chr3L 7995913 7995974 chr3L 7996066 7996125 9 154 6.5 0.0 3.2 2.1 212 chr3L 7995913 intron nmo + chr3L 7996019 intron nmo + chr3L 7996125 intron nmo + chr3L_9_7995001 chr3L_7995001 RAL-409_125b 1544 chr3L 7998836 7998891 chr3L 7998967 7999024 9 131 1.0 6.0 3.5 2.0 188 chr3L 7998836 intron nmo + chr3L 7998930 intron nmo + chr3L 7999024 intron nmo + chr3L_9_7995001 chr3L_7995001 RAL-409_125b 1545 chr3L 8019675 8019732 chr3L 8024128 8024132 NOF 13 4447 2.5 4.0 3.2 3.1 4457 chr3L 8019675 intron nmo + chr3L 8021904 intron nmo + chr3L 8024132 intron nmo + chr3L_13_8020001 chr3L_8020001 RAL-409_125b 1546 chr3L 8062814 8062852 chr3L 8062928 8062953 10 119 5.0 4.0 4.5 1.8 139 chr3L 8062814 intergenic not near genes chr3L 8062884 intergenic not near genes chr3L 8062953 intergenic not near genes chr3L_10_8060001 chr3L_8060001 RAL-409_125b 1547 chr3L 8064575 8064624 chr3L 8064839 8064884 11 263 6.0 4.5 5.2 1.8 309 chr3L 8064575 intron Ect4 + chr3L 8064730 intron Ect4 + chr3L 8064884 intron Ect4 + chr3L_11_8060001 chr3L_8060001 RAL-409_125b 1548 chr3L 8075327 8075382 chr3L 8075463 8075513 18 134 12.0 9.5 10.8 1.5 186 chr3L 8075327 intron Ect4 + chr3L 8075420 intron Ect4 + chr3L 8075513 intron Ect4 + chr3L_18_8075001 chr3L_8075001 RAL-409_125b 1549 chr3L 8081230 8081303 chr3L 8081383 8081448 17 151 2.0 3.5 2.8 4.5 218 chr3L 8081230 intron Ect4 + chr3L 8081339 intron Ect4 + chr3L 8081448 intron Ect4 + chr3L_17_8080001 chr3L_8080001 RAL-409_125b 1550 chr3L 8149722 8149784 chr3L 8149876 8149939 19 153 5.0 6.0 5.5 2.9 217 chr3L 8149722 intron CG13676 - chr3L 8149830 intron CG13676 - chr3L 8149939 intron CG13676 - chr3L_19_8145001 chr3L_8145001 RAL-409_125b 1551 chr3L 8207067 8207140 chr3L 8207198 8207271 5 131 2.5 6.5 4.5 0.9 204 chr3L 8207067 intergenic not near genes chr3L 8207169 intergenic not near genes chr3L 8207271 intergenic not near genes chr3L_5_8205001 chr3L_8205001 RAL-409_125b 1552 chr3L 8233494 8233568 chr3L 8238986 8239060 Rt1a 7 5488 1.0 3.5 2.2 2.2 5566 chr3L 8233494 intron CG7213 - chr3L 8236277 intron CG7213 - chr3L 8239060 intron,intron CG7213 -,Dscam4 + chr3L_7_8235001 chr3L_8235001 RAL-409_125b 1553 chr3L 8249343 8249414 chr3L 8249833 8249886 13 487 8.5 9.0 8.8 1.3 543 chr3L 8249343 intron Dscam4 + chr3L 8249614 intron Dscam4 + chr3L 8249886 intron Dscam4 + chr3L_13_8245001 chr3L_8245001 RAL-409_125b 1554 chr3L 8443548 8443583 chr3L 8443679 8443710 6 129 5.5 10.5 8.0 0.7 162 chr3L 8443548 3` UTR CG6983 - chr3L 8443629 3` UTR CG6983 - chr3L 8443710 3` UTR CG6983 - chr3L_6_8440001 chr3L_8440001 RAL-409_125b 1555 chr3L 8451340 8451409 chr3L 8451468 8451537 17 127 5.0 1.5 3.2 4.0 197 chr3L 8451340 intron Gug + chr3L 8451438 intron Gug + chr3L 8451537 intron Gug + chr3L_17_8450001 chr3L_8450001 RAL-409_125b 1556 chr3L 8456431 8456480 chr3L 8456570 8456616 14 128 6.5 8.0 7.2 1.7 185 chr3L 8456431 intron Gug + chr3L 8456524 intron Gug + chr3L 8456616 intron Gug + chr3L_14_8455001 chr3L_8455001 RAL-409_125b 1557 chr3L 8481759 8481791 chr3L 8490959 8490989 roo 7 9192 6.5 9.5 8.0 0.8 9230 chr3L 8481759 intron CG43163 - chr3L 8486374 intron CG43163 - chr3L 8490989 intron CG43163 - chr3L_7_8485001 chr3L_8485001 RAL-409_125b 1558 chr3L 8481793 8481797 chr3L 8490955 8491001 roo 5 9191 6.0 9.0 7.5 0.6 9208 chr3L 8481793 intron CG43163 - chr3L 8486397 intron CG43163 - chr3L 8491001 intron CG43163 - chr3L_5_8485001 chr3L_8485001 RAL-409_125b 1559 chr3L 8498264 8498323 chr3L 8505776 8505838 blood 21 7514 5.0 6.0 5.5 3.2 7574 chr3L 8498264 intron CG43163 - chr3L 8502051 intron CG43163 - chr3L 8505838 intron CG43163 - chr3L_21_8500001 chr3L_8500001 RAL-409_125b 1560 chr3L 8579808 8579871 chr3L 8579929 8579971 12 116 8.0 9.5 8.8 1.2 163 chr3L 8579808 intron CG43078 + chr3L 8579890 intron CG43078 + chr3L 8579971 intron CG43078 + chr3L_12_8575001 chr3L_8575001 RAL-409_125b 1561 chr3L 8682569 8682582 chr3L 8682703 8682712 5 134 12.0 5.5 8.8 0.5 143 chr3L 8682569 intergenic not near genes chr3L 8682640 intergenic not near genes chr3L 8682712 intergenic not near genes chr3L_5_8680001 chr3L_8680001 RAL-409_125b 1562 chr3L 8682585 8682629 chr3L 8682700 8682766 11 134 6.5 5.5 6.0 1.6 181 chr3L 8682585 intergenic not near genes chr3L 8682676 intergenic not near genes chr3L 8682766 intergenic not near genes chr3L_11_8680001 chr3L_8680001 RAL-409_125b 1563 chr3L 8717214 8717238 chr3L 8717462 8717470 10 245 34.5 19.0 26.8 0.4 256 chr3L 8717214 intergenic not near genes chr3L 8717342 intergenic not near genes chr3L 8717470 intergenic not near genes chr3L_10_8715001 chr3L_8715001 RAL-409_125b 1564 chr3L 8717240 8717278 chr3L 8717457 8717507 31 239 17.5 17.0 17.2 1.7 267 chr3L 8717240 intergenic not near genes chr3L 8717374 intergenic not near genes chr3L 8717507 intergenic not near genes chr3L_31_8715001 chr3L_8715001 RAL-409_125b 1565 chr3L 8791239 8791302 chr3L 8796698 8796771 I-element 10 5463 3.0 0.0 1.5 4.0 5532 chr3L 8791239 exon Fhos + chr3L 8794005 intron Fhos + chr3L 8796771 intron Fhos + chr3L_10_8790001 chr3L_8790001 RAL-409_125b 1566 chr3L 8832379 8832422 chr3L 8832523 8832543 8 136 11.0 11.5 11.2 0.7 164 chr3L 8832379 intron dally + chr3L 8832461 intron dally + chr3L 8832543 intron dally + chr3L_8_8830001 chr3L_8830001 RAL-409_125b 1567 chr3L 8839679 8839734 chr3L 8839809 8839863 11 129 4.5 1.0 2.8 2.9 184 chr3L 8839679 intron dally + chr3L 8839771 intron dally + chr3L 8839863 intron dally + chr3L_11_8835001 chr3L_8835001 RAL-409_125b 1568 chr3L 8884375 8884411 chr3L 8884603 8884640 9 235 6.5 3.5 5.0 1.5 265 chr3L 8884375 intron dally + chr3L 8884508 intron dally + chr3L 8884640 intron dally + chr3L_9_8880001 chr3L_8880001 RAL-409_125b 1569 chr3L 8916517 8916568 chr3L 8916652 8916703 12 134 1.5 5.0 3.2 2.9 186 chr3L 8916517 intron Tsp66E + chr3L 8916610 intron Tsp66E + chr3L 8916703 intron Tsp66E + chr3L_12_8915001 chr3L_8915001 RAL-409_125b 1570 chr3L 8950509 8950554 chr3L 8950648 8950697 9 141 8.5 5.5 7.0 1.1 188 chr3L 8950509 intron,intron CG43783 -,orb2 - chr3L 8950603 intron,intron CG43783 -,orb2 - chr3L 8950697 intron,intron CG43783 -,orb2 - chr3L_9_8950001 chr3L_8950001 RAL-409_125b 1571 chr3L 9003915 9003962 chr3L 9004041 9004092 13 125 9.5 3.0 6.2 1.8 177 chr3L 9003915 intergenic not near genes chr3L 9004004 intergenic not near genes chr3L 9004092 intergenic not near genes chr3L_13_9000001 chr3L_9000001 RAL-409_125b 1572 chr3L 9009917 9009973 chr3L 9010071 9010127 9 152 1.5 6.0 3.8 1.9 210 chr3L 9009917 intergenic CG5194 - chr3L 9010022 intergenic CG5194 - chr3L 9010127 intergenic CG5194 - chr3L_9_9010001 chr3L_9010001 RAL-409_125b 1573 chr3L 9011106 9011156 chr3L 9011224 9011297 14 134 2.5 2.0 2.2 4.4 191 chr3L 9011106 intergenic not near genes chr3L 9011202 intergenic not near genes chr3L 9011297 intergenic not near genes chr3L_14_9010001 chr3L_9010001 RAL-409_125b 1574 chr3L 9013689 9013694 chr3L 18417066 18417066 4 9403374 23.0 16.0 19.5 0.2 9403377 chr3L 9013689 intron Doc2 - chr3L 13715378 intron bru-3 - chr3L 18417066 intergenic not near genes chr3L_4_13715001 chr3L_13715001 RAL-409_125b 1575 chr3L 9024458 9024528 chr3L 9024588 9024658 9 126 7.5 7.5 7.5 1.1 200 chr3L 9024458 intergenic not near genes chr3L 9024558 intergenic not near genes chr3L 9024658 intergenic not near genes chr3L_9_9020001 chr3L_9020001 RAL-409_125b 1576 chr3L 9030384 9030455 chr3L 9030508 9030584 6 128 5.0 3.5 4.2 1.2 200 chr3L 9030384 intergenic not near genes chr3L 9030484 intergenic not near genes chr3L 9030584 intergenic not near genes chr3L_6_9030001 chr3L_9030001 RAL-409_125b 1577 chr3L 9047046 9047111 chr3L 9047183 9047183 4 121 1.5 3.5 2.5 1.1 137 chr3L 9047046 intergenic CG5144 + chr3L 9047114 intergenic CG5144 + chr3L 9047183 intergenic CG5144 + chr3L_4_9045001 chr3L_9045001 RAL-409_125b 1578 chr3L 9076899 9076957 chr3L 9084495 9084512 412 16 7600 3.0 7.0 5.0 2.7 7613 chr3L 9076899 exon Tequila + chr3L 9080706 intron Tequila + chr3L 9084512 exon Tequila + chr3L_16_9080001 chr3L_9080001 RAL-409_125b 1579 chr3L 9128159 9128219 chr3L 9128284 9128354 10 133 3.5 3.5 3.5 2.2 195 chr3L 9128159 intron bol - chr3L 9128256 intron bol - chr3L 9128354 intron bol - chr3L_10_9125001 chr3L_9125001 RAL-409_125b 1580 chr3L 9130514 9130575 chr3L 9134320 9134363 412 12 3799 6.0 8.0 7.0 1.5 3849 chr3L 9130514 intergenic bol - chr3L 9132438 intergenic not near genes chr3L 9134363 intergenic Dhpr + chr3L_12_9130001 chr3L_9130001 RAL-409_125b 1581 chr3L 9164661 9164680 chr3L 9166176 9166187 hobo 4 1512 10.5 0.0 5.2 0.6 1526 chr3L 9164661 intron Rdl - chr3L 9165424 intron Rdl - chr3L 9166187 intron Rdl - chr3L_4_9165001 chr3L_9165001 RAL-409_125b 1582 chr3L 9213200 9213209 chr3L 9213324 9213332 4 126 12.0 5.5 8.8 0.4 132 chr3L 9213200 exon CG4476 + chr3L 9213266 intron CG4476 + chr3L 9213332 intron CG4476 + chr3L_4_9210001 chr3L_9210001 RAL-409_125b 1583 chr3L 9219227 9219269 chr3L 9219929 9219961 jockey 16 710 11.5 6.0 8.8 1.6 734 chr3L 9219227 intergenic not near genes chr3L 9219594 intergenic not near genes chr3L 9219961 intergenic not near genes chr3L_16_9215001 chr3L_9215001 RAL-409_125b 1584 chr3L 9270576 9270632 chr3L 9278381 9278401 roo 6 7797 5.5 3.5 4.5 1.1 7825 chr3L 9270576 intron GluRIB + chr3L 9274488 intron GluRIB + chr3L 9278401 exon GluRIB + chr3L_6_9270001 chr3L_9270001 RAL-409_125b 1585 chr3L 9312703 9312734 chr3L 9312813 9312855 8 122 5.0 7.0 6.0 1.1 152 chr3L 9312703 intergenic not near genes chr3L 9312779 intergenic not near genes chr3L 9312855 intergenic not near genes chr3L_8_9310001 chr3L_9310001 RAL-409_125b 1586 chr3L 9320374 9320428 chr3L 9320504 9320544 5 123 5.5 8.0 6.8 0.6 170 chr3L 9320374 intergenic not near genes chr3L 9320459 intergenic not near genes chr3L 9320544 intergenic not near genes chr3L_5_9320001 chr3L_9320001 RAL-409_125b 1587 chr3L 9429467 9429516 chr3L 9429604 9429659 9 135 5.5 6.5 6.0 1.3 192 chr3L 9429467 intron,3` UTR RpS17 -,snoRNA:Psi28S-612 - chr3L 9429563 intron RpS17 - chr3L 9429659 intron RpS17 - chr3L_9_9425001 chr3L_9425001 RAL-409_125b 1588 chr3L 9443491 9443528 chr3L 9445327 9445364 S-element 7 1834 1.5 6.5 4.0 1.4 1873 chr3L 9443491 intron CG33926 + chr3L 9444428 intron CG33926 + chr3L 9445364 intron CG33926 + chr3L_7_9440001 chr3L_9440001 RAL-409_125b 1589 chr3L 9501679 9501732 chr3L 9502187 9502265 roo 12 530 3.5 2.5 3.0 3.0 586 chr3L 9501679 intron path - chr3L 9501972 intron path - chr3L 9502265 intron path - chr3L_12_9500001 chr3L_9500001 RAL-409_125b 1590 chr3L 9502570 9502625 chr3L 9502700 9502755 12 130 9.5 6.5 8.0 1.3 185 chr3L 9502570 intron path - chr3L 9502662 intron path - chr3L 9502755 intron path - chr3L_12_9500001 chr3L_9500001 RAL-409_125b 1591 chr3L 9503426 9503460 chr3L 9503555 9503589 7 136 5.5 6.5 6.0 1.0 163 chr3L 9503426 intron path - chr3L 9503508 intron path - chr3L 9503589 intron path - chr3L_7_9500001 chr3L_9500001 RAL-409_125b 1592 chr3L 9513402 9513465 chr3L 9513539 9513602 12 136 8.0 8.0 8.0 1.3 200 chr3L 9513402 exon CG33702 - chr3L 9513502 intergenic CG33702 - chr3L 9513602 intergenic CG33702 - chr3L_12_9510001 chr3L_9510001 RAL-409_125b 1593 chr3L 9523988 9524054 chr3L 9524118 9524184 7 126 6.0 8.0 7.0 0.9 196 chr3L 9523988 intron CG33700 - chr3L 9524086 intron CG33700 - chr3L 9524184 intron CG33700 - chr3L_7_9520001 chr3L_9520001 RAL-409_125b 1594 chr3L 9533754 9533784 chr3L 9541313 9541339 412 7 7582 4.5 3.0 3.8 1.5 7585 chr3L 9533754 intergenic not near genes chr3L 9537546 intergenic not near genes chr3L 9541339 intergenic not near genes chr3L_7_9535001 chr3L_9535001 RAL-409_125b 1595 chr3L 9541804 9541860 chr3L 9541939 9541993 7 133 3.5 4.0 3.8 1.5 189 chr3L 9541804 intergenic Ir67a - chr3L 9541898 intergenic Ir67a - chr3L 9541993 intergenic Ir67a - chr3L_7_9540001 chr3L_9540001 RAL-409_125b 1596 chr3L 9571886 9571890 chr3L 9572275 9572288 jockey 5 393 11.5 7.0 9.2 0.5 402 chr3L 9571886 intron CG42673 + chr3L 9572087 intron CG42673 + chr3L 9572288 intron CG42673 + chr3L_5_9570001 chr3L_9570001 RAL-409_125b 1597 chr3L 9571893 9571911 chr3L 9572271 9572309 jockey 7 394 9.5 6.5 8.0 0.8 416 chr3L 9571893 intron CG42673 + chr3L 9572101 intron CG42673 + chr3L 9572309 intron CG42673 + chr3L_7_9570001 chr3L_9570001 RAL-409_125b 1598 chr3L 9575894 9575929 chr3L 9581016 9581055 jockey 4 5126 9.5 9.0 9.2 0.4 5161 chr3L 9575894 intron CG42673 + chr3L 9578474 intron CG42673 + chr3L 9581055 intron CG42673 + chr3L_4_9575001 chr3L_9575001 RAL-409_125b 1599 chr3L 9604204 9604243 chr3L 9604348 9604387 5 144 0.0 1.5 0.8 2.8 183 chr3L 9604204 intron CG3280 + chr3L 9604296 intron CG3280 + chr3L 9604387 intron CG3280 + chr3L_5_9600001 chr3L_9600001 RAL-409_125b 1600 chr3L 9629699 9629763 chr3L 9629825 9629889 9 126 2.5 6.5 4.5 1.6 190 chr3L 9629699 intron CG8336 + chr3L 9629794 intron CG8336 + chr3L 9629889 intron CG8336 + chr3L_9_9625001 chr3L_9625001 RAL-409_125b 1601 chr3L 9676154 9676214 chr3L 9676279 9676364 10 136 5.0 0.5 2.8 2.6 210 chr3L 9676154 intron fry - chr3L 9676259 intron fry - chr3L 9676364 intron fry - chr3L_10_9675001 chr3L_9675001 RAL-409_125b 1602 chr3L 9741576 9741627 chr3L 9741718 9741766 12 139 6.0 3.5 4.8 2.1 190 chr3L 9741576 intron,intron CG42268 -,CR44348 + chr3L 9741671 intron,intron CG42268 -,CR44348 + chr3L 9741766 intron,intron CG42268 -,CR44348 + chr3L_12_9740001 chr3L_9740001 RAL-409_125b 1603 chr3L 9750606 9750609 chr3L 9750733 9750736 4 127 10.5 1.5 6.0 0.6 130 chr3L 9750606 intron CG42268 - chr3L 9750671 intron CG42268 - chr3L 9750736 intron CG42268 - chr3L_4_9750001 chr3L_9750001 RAL-409_125b 1604 chr3L 9750611 9750640 chr3L 9750732 9750767 10 125 7.0 1.5 4.2 1.9 156 chr3L 9750611 intron CG42268 - chr3L 9750689 intron CG42268 - chr3L 9750767 intron CG42268 - chr3L_10_9750001 chr3L_9750001 RAL-409_125b 1605 chr3L 9775069 9775137 chr3L 9775200 9775268 15 126 6.0 4.0 5.0 2.5 199 chr3L 9775069 intron CG8177 + chr3L 9775168 intron CG8177 + chr3L 9775268 intron CG8177 + chr3L_15_9775001 chr3L_9775001 RAL-409_125b 1606 chr3L 9824109 9824172 chr3L 9824238 9824309 12 131 8.0 1.0 4.5 2.2 200 chr3L 9824109 intron CG43897 + chr3L 9824209 intron CG43897 + chr3L 9824309 intron CG43897 + chr3L_12_9820001 chr3L_9820001 RAL-409_125b 1607 chr3L 9829007 9829078 chr3L 9829139 9829184 9 127 3.0 6.0 4.5 1.6 177 chr3L 9829007 intron CG43897 + chr3L 9829096 intron CG43897 + chr3L 9829184 intron CG43897 + chr3L_9_9825001 chr3L_9825001 RAL-409_125b 1608 chr3L 9918838 9918911 chr3L 9918978 9919056 16 137 3.5 6.0 4.8 2.8 218 chr3L 9918838 intron CG34356 + chr3L 9918947 intron CG34356 + chr3L 9919056 intron CG34356 + chr3L_16_9915001 chr3L_9915001 RAL-409_125b 1609 chr3L 9929638 9929691 chr3L 9938467 9938504 roo 16 8823 7.5 8.0 7.8 1.8 8866 chr3L 9929638 intron CG34356 + chr3L 9934071 intron CG34356 + chr3L 9938504 intron CG34356 + chr3L_16_9930001 chr3L_9930001 RAL-409_125b 1610 chr3L 9945636 9945660 chr3L 9945769 9945793 4 133 4.5 3.5 4.0 0.8 157 chr3L 9945636 intron CG34356 + chr3L 9945714 intron CG34356 + chr3L 9945793 intron CG34356 + chr3L_4_9945001 chr3L_9945001 RAL-409_125b 1611 chr3L 9956125 9956167 chr3L 9956276 9956321 5 167 1.5 6.0 3.8 1.0 196 chr3L 9956125 intron CG34356 + chr3L 9956223 intron CG34356 + chr3L 9956321 intron CG34356 + chr3L_5_9955001 chr3L_9955001 RAL-409_125b 1612 chr3L 9989082 9989136 chr3L 9989427 9989474 10 343 8.0 9.0 8.5 1.1 392 chr3L 9989082 intron dpr6 + chr3L 9989278 intron dpr6 + chr3L 9989474 intron dpr6 + chr3L_10_9985001 chr3L_9985001 RAL-409_125b 1613 chr3L 10032504 10032566 chr3L 10032640 10032703 4 136 3.0 5.5 4.2 0.8 199 chr3L 10032504 intron dpr6 + chr3L 10032604 intron dpr6 + chr3L 10032703 intron dpr6 + chr3L_4_10030001 chr3L_10030001 RAL-409_125b 1614 chr3L 10049523 10049573 chr3L 10049642 10049693 11 126 7.0 7.5 7.2 1.3 170 chr3L 10049523 intron dpr6 + chr3L 10049608 intron dpr6 + chr3L 10049693 intron dpr6 + chr3L_11_10045001 chr3L_10045001 RAL-409_125b 1615 chr3L 10060085 10060112 chr3L 10067704 10067741 17.6 6 7627 11.5 14.5 13.0 0.4 7656 chr3L 10060085 intron dpr6 + chr3L 10063913 intron dpr6 + chr3L 10067741 intron dpr6 + chr3L_6_10060001 chr3L_10060001 RAL-409_125b 1616 chr3L 10188726 10188794 chr3L 10191571 10191621 8 2839 24.5 36.0 30.2 0.3 2895 chr3L 10188726 intergenic not near genes chr3L 10190174 intergenic ect - chr3L 10191621 exon ect - chr3L_8_10190001 chr3L_10190001 RAL-409_125b 1617 chr3L 10214685 10214828 chr3L 10214821 10214980 9 165 0.0 0.0 0.0 9.0 295 chr3L 10214685 intergenic not near genes chr3L 10214832 intergenic not near genes chr3L 10214980 intergenic not near genes chr3L_9_10210001 chr3L_10210001 RAL-409_125b 1618 chr3L 10222693 10222770 chr3L 10222823 10222895 12 126 0.0 4.5 2.2 3.8 202 chr3L 10222693 intron scramb1 - chr3L 10222794 intron scramb1 - chr3L 10222895 intron scramb1 - chr3L_12_10220001 chr3L_10220001 RAL-409_125b 1619 chr3L 10223691 10223748 chr3L 10223896 10223922 7 198 6.0 8.0 7.0 0.9 231 chr3L 10223691 intron scramb1 - chr3L 10223806 intron scramb1 - chr3L 10223922 exon scramb1 - chr3L_7_10220001 chr3L_10220001 RAL-409_125b 1620 chr3L 10300743 10300791 chr3L 10300878 10300920 6 133 6.5 1.0 3.8 1.2 177 chr3L 10300743 intergenic not near genes chr3L 10300832 intergenic not near genes chr3L 10300920 intergenic not near genes chr3L_6_10300001 chr3L_10300001 RAL-409_125b 1621 chr3L 10308702 10308766 chr3L 10308829 10308881 20 122 1.0 5.0 3.0 5.0 179 chr3L 10308702 intergenic not near genes chr3L 10308792 intergenic not near genes chr3L 10308881 intergenic not near genes chr3L_20_10305001 chr3L_10305001 RAL-409_125b 1622 chr3L 10381682 10381688 chr3L 10381812 10381816 4 130 9.5 8.5 9.0 0.4 134 chr3L 10381682 intergenic not near genes chr3L 10381749 intergenic not near genes chr3L 10381816 intergenic not near genes chr3L_4_10380001 chr3L_10380001 RAL-409_125b 1623 chr3L 10381691 10381704 chr3L 10381804 10381831 6 121 9.0 6.0 7.5 0.7 140 chr3L 10381691 intergenic not near genes chr3L 10381761 intergenic not near genes chr3L 10381831 intergenic not near genes chr3L_6_10380001 chr3L_10380001 RAL-409_125b 1624 chr3L 10395458 10395515 chr3L 10395664 10395711 11 204 2.0 7.5 4.8 1.9 253 chr3L 10395458 intergenic not near genes chr3L 10395584 intergenic not near genes chr3L 10395711 intergenic not near genes chr3L_11_10395001 chr3L_10395001 RAL-409_125b 1625 chr3L 10414912 10414957 chr3L 10417334 10417379 Doc 21 2418 8.0 6.0 7.0 2.6 2467 chr3L 10414912 intergenic CG12362 + chr3L 10416146 intergenic not near genes chr3L 10417379 intergenic not near genes chr3L_21_10415001 chr3L_10415001 RAL-409_125b 1626 chr3L 10417575 10417593 chr3L 10417671 10417720 8 108 5.0 8.0 6.5 1.1 145 chr3L 10417575 intergenic not near genes chr3L 10417648 intergenic not near genes chr3L 10417720 intergenic not near genes chr3L_8_10415001 chr3L_10415001 RAL-409_125b 1627 chr3L 10455960 10456032 chr3L 10456203 10456275 19 233 3.5 4.5 4.0 3.8 315 chr3L 10455960 intergenic not near genes chr3L 10456118 intergenic not near genes chr3L 10456275 intergenic not near genes chr3L_19_10455001 chr3L_10455001 RAL-409_125b 1628 chr3L 10456707 10456767 chr3L 10456837 10456907 11 139 4.5 4.0 4.2 2.1 200 chr3L 10456707 intergenic not near genes chr3L 10456807 intergenic not near genes chr3L 10456907 intergenic not near genes chr3L_11_10455001 chr3L_10455001 RAL-409_125b 1629 chr3L 10525222 10525267 chr3L 10525349 10525393 8 124 8.5 3.0 5.8 1.2 171 chr3L 10525222 intron A2bp1 + chr3L 10525308 intron A2bp1 + chr3L 10525393 intron A2bp1 + chr3L_8_10525001 chr3L_10525001 RAL-409_125b 1630 chr3L 10551413 10551465 chr3L 10551551 10551602 5 137 2.0 5.5 3.8 1.0 189 chr3L 10551413 intron A2bp1 + chr3L 10551508 intron A2bp1 + chr3L 10551602 intron A2bp1 + chr3L_5_10550001 chr3L_10550001 RAL-409_125b 1631 chr3L 10600412 10600476 chr3L 10600539 10600607 16 127 1.5 2.5 2.0 5.3 195 chr3L 10600412 intergenic not near genes chr3L 10600510 intergenic not near genes chr3L 10600607 intergenic not near genes chr3L_16_10600001 chr3L_10600001 RAL-409_125b 1632 chr3L 10611279 10611327 chr3L 10611400 10611447 8 122 6.0 4.0 5.0 1.3 168 chr3L 10611279 intergenic not near genes chr3L 10611363 intergenic not near genes chr3L 10611447 intergenic not near genes chr3L_8_10610001 chr3L_10610001 RAL-409_125b 1633 chr3L 10621803 10621878 chr3L 10621940 10622003 13 135 1.0 4.5 2.8 3.4 200 chr3L 10621803 intergenic not near genes chr3L 10621903 intergenic not near genes chr3L 10622003 intergenic not near genes chr3L_13_10620001 chr3L_10620001 RAL-409_125b 1634 chr3L 10658056 10658204 chr3L 10658183 10658381 20 160 0.0 0.0 0.0 20.0 325 chr3L 10658056 intron CG32066 - chr3L 10658218 intron CG32066 - chr3L 10658381 intron CG32066 - chr3L_20_10655001 chr3L_10655001 RAL-409_125b 1635 chr3L 10678624 10678705 chr3L 10678763 10678834 6 130 0.0 2.0 1.0 3.0 210 chr3L 10678624 intron simj + chr3L 10678729 intron simj + chr3L 10678834 intron simj + chr3L_6_10675001 chr3L_10675001 RAL-409_125b 1636 chr3L 10721393 10721420 chr3L 10721545 10721573 10 150 6.0 9.5 7.8 1.1 180 chr3L 10721393 intergenic not near genes chr3L 10721483 intergenic not near genes chr3L 10721573 intergenic not near genes chr3L_10_10720001 chr3L_10720001 RAL-409_125b 1637 chr3L 10735823 10735833 chr3L 10735956 10735972 4 136 8.5 14.0 11.2 0.3 149 chr3L 10735823 intergenic not near genes chr3L 10735898 intergenic not near genes chr3L 10735972 intergenic not near genes chr3L_4_10735001 chr3L_10735001 RAL-409_125b 1638 chr3L 10762808 10762859 chr3L 10762921 10762963 6 117 5.5 5.5 5.5 0.9 155 chr3L 10762808 intergenic not near genes chr3L 10762886 intergenic not near genes chr3L 10762963 intergenic not near genes chr3L_6_10760001 chr3L_10760001 RAL-409_125b 1639 chr3L 10764096 10764153 chr3L 10764211 10764247 14 121 4.5 2.5 3.5 3.1 151 chr3L 10764096 intergenic not near genes chr3L 10764172 intergenic not near genes chr3L 10764247 intergenic not near genes chr3L_14_10760001 chr3L_10760001 RAL-409_125b 1640 chr3L 10774702 10774732 chr3L 10775637 10775663 6 938 7.5 4.5 6.0 0.9 961 chr3L 10774702 intergenic not near genes chr3L 10775182 intergenic not near genes chr3L 10775663 intergenic not near genes chr3L_6_10775001 chr3L_10775001 RAL-409_125b 1641 chr3L 10811728 10811791 chr3L 10811855 10811918 11 126 3.0 2.0 2.5 3.1 190 chr3L 10811728 intergenic not near genes chr3L 10811823 intergenic not near genes chr3L 10811918 intergenic not near genes chr3L_11_10810001 chr3L_10810001 RAL-409_125b 1642 chr3L 10941388 10941459 chr3L 10941523 10941591 6 134 0.0 1.5 0.8 3.3 203 chr3L 10941388 intergenic not near genes chr3L 10941490 intergenic not near genes chr3L 10941591 intergenic not near genes chr3L_6_10940001 chr3L_10940001 RAL-409_125b 1643 chr3L 11053616 11053638 chr3L 11053753 11053778 9 139 4.5 1.0 2.8 2.4 162 chr3L 11053616 intergenic CG7888 + chr3L 11053697 intergenic CG7888 + chr3L 11053778 intergenic CG7888 + chr3L_9_11050001 chr3L_11050001 RAL-409_125b 1644 chr3L 11083476 11083531 chr3L 11083624 11083666 12 145 8.0 9.0 8.5 1.3 190 chr3L 11083476 exon JIL-1 - chr3L 11083571 intron JIL-1 - chr3L 11083666 intron JIL-1 - chr3L_12_11080001 chr3L_11080001 RAL-409_125b 1645 chr3L 11085654 11085703 chr3L 11085787 11085836 13 133 4.5 10.0 7.2 1.6 182 chr3L 11085654 exon JIL-1 - chr3L 11085745 intron JIL-1 - chr3L 11085836 intron JIL-1 - chr3L_13_11085001 chr3L_11085001 RAL-409_125b 1646 chr3L 11086997 11087087 chr3L 11088849 11088926 S-element 12 1834 0.0 5.5 2.8 3.2 1929 chr3L 11086997 intron JIL-1 - chr3L 11087962 intron JIL-1 - chr3L 11088926 intron JIL-1 - chr3L_12_11085001 chr3L_11085001 RAL-409_125b 1647 chr3L 11090028 11090085 chr3L 11090154 11090223 7 136 4.5 8.5 6.5 0.9 195 chr3L 11090028 intron JIL-1 - chr3L 11090126 intron JIL-1 - chr3L 11090223 intron JIL-1 - chr3L_7_11090001 chr3L_11090001 RAL-409_125b 1648 chr3L 11105254 11105311 chr3L 11107010 11107066 X-element 6 1757 5.5 5.0 5.2 1.0 1812 chr3L 11105254 intergenic not near genes chr3L 11106160 intergenic not near genes chr3L 11107066 exon CG32073 - chr3L_6_11105001 chr3L_11105001 RAL-409_125b 1649 chr3L 11135486 11135522 chr3L 11135761 11135802 9 278 4.5 0.0 2.2 2.8 316 chr3L 11135486 intergenic CG14143 + chr3L 11135644 intergenic CG14143 +,CG32082 + chr3L 11135802 intergenic CG32082 +,CG14143 + chr3L_9_11135001 chr3L_11135001 RAL-409_125b 1650 chr3L 11145536 11145549 chr3L 11145666 11145682 5 135 0.0 6.5 3.2 1.2 146 chr3L 11145536 intron CG32082 + chr3L 11145609 intron CG32082 + chr3L 11145682 intron CG32082 + chr3L_5_11145001 chr3L_11145001 RAL-409_125b 1651 chr3L 11157693 11157764 chr3L 11157862 11157933 9 168 5.0 6.0 5.5 1.4 240 chr3L 11157693 intron CG32082 + chr3L 11157813 intron CG32082 + chr3L 11157933 intron CG32082 + chr3L_9_11155001 chr3L_11155001 RAL-409_125b 1652 chr3L 11187696 11187735 chr3L 11187827 11187866 8 130 0.5 5.0 2.8 2.1 170 chr3L 11187696 intron GlcAT-P - chr3L 11187781 intron GlcAT-P - chr3L 11187866 intron GlcAT-P - chr3L_8_11185001 chr3L_11185001 RAL-409_125b 1653 chr3L 11241735 11241787 chr3L 11241861 11241919 9 131 3.5 4.0 3.8 1.9 184 chr3L 11241735 intergenic not near genes chr3L 11241827 intergenic not near genes chr3L 11241919 intergenic not near genes chr3L_9_11240001 chr3L_11240001 RAL-409_125b 1654 chr3L 11264442 11264484 chr3L 11271419 11271486 17.6 12 6995 3.5 5.0 4.2 2.3 7044 chr3L 11264442 intergenic not near genes chr3L 11267964 intergenic not near genes chr3L 11271486 intergenic not near genes chr3L_12_11265001 chr3L_11265001 RAL-409_125b 1655 chr3L 11277445 11277459 chr3L 11278475 11278498 Rt1a 5 1033 1.5 7.0 4.2 1.0 1053 chr3L 11277445 intergenic not near genes chr3L 11277972 intergenic not near genes chr3L 11278498 intergenic not near genes chr3L_5_11275001 chr3L_11275001 RAL-409_125b 1656 chr3L 11279690 11279718 chr3L 11279814 11279819 4 114 9.5 7.0 8.2 0.4 129 chr3L 11279690 intergenic not near genes chr3L 11279754 intergenic not near genes chr3L 11279819 intergenic not near genes chr3L_4_11275001 chr3L_11275001 RAL-409_125b 1657 chr3L 11279722 11279750 chr3L 11279806 11279881 9 111 7.5 6.0 6.8 1.2 159 chr3L 11279722 intergenic not near genes chr3L 11279802 intergenic not near genes chr3L 11279881 intergenic not near genes chr3L_9_11275001 chr3L_11275001 RAL-409_125b 1658 chr3L 11285165 11285223 chr3L 11285351 11285425 10 197 5.5 1.5 3.5 2.2 260 chr3L 11285165 5` UTR CR45404 + chr3L 11285295 intergenic CR45404 + chr3L 11285425 intergenic CR45404 + chr3L_10_11285001 chr3L_11285001 RAL-409_125b 1659 chr3L 11329662 11329723 chr3L 11332917 11332978 jockey 10 3249 5.5 8.0 6.8 1.3 3316 chr3L 11329662 intergenic not near genes chr3L 11331320 intergenic not near genes chr3L 11332978 intergenic not near genes chr3L_10_11330001 chr3L_11330001 RAL-409_125b 1660 chr3L 11386056 11386086 chr3L 11386173 11386196 5 119 8.0 8.5 8.2 0.5 140 chr3L 11386056 intergenic not near genes chr3L 11386126 intergenic not near genes chr3L 11386196 intergenic not near genes chr3L_5_11385001 chr3L_11385001 RAL-409_125b 1661 chr3L 11397554 11397595 chr3L 11397677 11397729 10 127 3.5 8.0 5.8 1.5 175 chr3L 11397554 exon CG44362 + chr3L 11397642 exon CG44362 + chr3L 11397729 exon CG44362 + chr3L_10_11395001 chr3L_11395001 RAL-409_125b 1662 chr3L 11541145 11541219 chr3L 11541275 11541347 9 130 6.0 6.0 6.0 1.3 202 chr3L 11541145 intron Mob2 - chr3L 11541246 intron Mob2 - chr3L 11541347 intron Mob2 - chr3L_9_11540001 chr3L_11540001 RAL-409_125b 1663 chr3L 11551985 11552058 chr3L 11552112 11552180 12 126 3.0 3.0 3.0 3.0 195 chr3L 11551985 intron Mob2 - chr3L 11552082 intron Mob2 - chr3L 11552180 intron Mob2 - chr3L_12_11550001 chr3L_11550001 RAL-409_125b 1664 chr3L 11553679 11553728 chr3L 11553831 11553880 15 148 8.5 8.0 8.2 1.6 201 chr3L 11553679 intron Mob2 - chr3L 11553780 intron Mob2 - chr3L 11553880 intron Mob2 - chr3L_15_11550001 chr3L_11550001 RAL-409_125b 1665 chr3L 11579509 11579584 chr3L 11579664 11579740 17 152 7.5 2.5 5.0 2.8 231 chr3L 11579509 intergenic CG43390 - chr3L 11579624 intergenic CG43390 - chr3L 11579740 intergenic CG43390 - chr3L_17_11575001 chr3L_11575001 RAL-409_125b 1666 chr3L 11673934 11673943 chr3L 11674060 11674069 4 126 10.5 0.0 5.2 0.6 135 chr3L 11673934 intron CG32085 - chr3L 11674002 intron CG32085 - chr3L 11674069 intron CG32085 - chr3L_4_11670001 chr3L_11670001 RAL-409_125b 1667 chr3L 11678054 11678116 chr3L 11678191 11678253 14 134 4.5 5.0 4.8 2.4 199 chr3L 11678054 intron CG32085 - chr3L 11678154 intron CG32085 - chr3L 11678253 intron CG32085 - chr3L_14_11675001 chr3L_11675001 RAL-409_125b 1668 chr3L 11723073 11723108 chr3L 11727908 11727943 Doc 11 4841 6.5 12.5 9.5 1.0 4870 chr3L 11723073 3` UTR Bmcp + chr3L 11725508 intron Bmcp + chr3L 11727943 3` UTR Bmcp + chr3L_11_11725001 chr3L_11725001 RAL-409_125b 1669 chr3L 11740094 11740153 chr3L 11740242 11740276 16 135 4.0 8.5 6.2 2.2 182 chr3L 11740094 intron CG6024 - chr3L 11740185 intron CG6024 - chr3L 11740276 intron CG6024 - chr3L_16_11740001 chr3L_11740001 RAL-409_125b 1670 chr3L 11777678 11777678 chr3L 12163305 12163305 4 385627 18.0 25.0 21.5 0.2 385627 chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L 11970492 exon Muc68E - chr3L 12163305 intron CG9760 - chr3L_4_11970001 chr3L_11970001 RAL-409_125b 1671 chr3L 11788561 11788629 chr3L 11788687 11788755 7 125 4.5 4.0 4.2 1.3 194 chr3L 11788561 intron Pi3K68D - chr3L 11788658 intron Pi3K68D - chr3L 11788755 intron Pi3K68D - chr3L_7_11785001 chr3L_11785001 RAL-409_125b 1672 chr3L 11846353 11846406 chr3L 11846511 11846561 8 158 3.5 6.0 4.8 1.4 208 chr3L 11846353 intergenic not near genes chr3L 11846457 intergenic not near genes chr3L 11846561 intergenic not near genes chr3L_8_11845001 chr3L_11845001 RAL-409_125b 1673 chr3L 11847128 11847155 chr3L 11847263 11847295 9 139 1.0 1.0 1.0 4.5 167 chr3L 11847128 intergenic CG12521 - chr3L 11847212 intergenic CG12521 - chr3L 11847295 intergenic CG12521 - chr3L_9_11845001 chr3L_11845001 RAL-409_125b 1674 chr3L 11849290 11849328 chr3L 11849433 11849478 13 148 7.0 4.0 5.5 2.0 188 chr3L 11849290 intergenic not near genes chr3L 11849384 intergenic not near genes chr3L 11849478 intergenic not near genes chr3L_13_11845001 chr3L_11845001 RAL-409_125b 1675 chr3L 11849347 11849356 chr3L 11849452 11849506 7 143 4.5 6.5 5.5 1.1 159 chr3L 11849347 intergenic not near genes chr3L 11849426 intergenic not near genes chr3L 11849506 intergenic not near genes chr3L_7_11845001 chr3L_11845001 RAL-409_125b 1676 chr3L 11850117 11850154 chr3L 11850238 11850299 7 137 9.5 4.0 6.8 0.9 182 chr3L 11850117 intergenic not near genes chr3L 11850208 intergenic CG44837 - chr3L 11850299 intergenic CG44837 - chr3L_7_11850001 chr3L_11850001 RAL-409_125b 1677 chr3L 11864516 11864580 chr3L 11865856 11865915 pogo 14 1342 4.5 8.0 6.2 1.9 1399 chr3L 11864516 intron CG44837 - chr3L 11865216 intron CG44837 - chr3L 11865915 intron CG44837 - chr3L_14_11865001 chr3L_11865001 RAL-409_125b 1678 chr3L 11887217 11887265 chr3L 11887359 11887416 9 145 9.0 0.0 4.5 1.6 199 chr3L 11887217 intron CG44837 - chr3L 11887316 intron,3` UTR CG44837 -,CG5897 - chr3L 11887416 intron,3` UTR CG44837 -,CG5897 - chr3L_9_11885001 chr3L_11885001 RAL-409_125b 1679 chr3L 11901315 11901371 chr3L 11901441 11901512 5 135 0.5 5.5 3.0 1.2 197 chr3L 11901315 intron CG44837 - chr3L 11901414 intron CG44837 - chr3L 11901512 intron CG44837 - chr3L_5_11900001 chr3L_11900001 RAL-409_125b 1680 chr3L 11903001 11903058 chr3L 11903329 11903389 10 331 3.5 1.0 2.2 3.1 388 chr3L 11903001 intron CG44837 - chr3L 11903195 intron CG44837 - chr3L 11903389 intron CG44837 - chr3L_10_11900001 chr3L_11900001 RAL-409_125b 1681 chr3L 11943446 11943514 chr3L 11943597 11943665 18 149 1.5 3.0 2.2 5.6 219 chr3L 11943446 3` UTR Rpt4R + chr3L 11943556 intergenic Rpt4R +,CG5883 - chr3L 11943665 3` UTR CG5883 - chr3L_18_11940001 chr3L_11940001 RAL-409_125b 1682 chr3L 12013877 12013930 chr3L 12014008 12014071 7 131 5.0 3.0 4.0 1.4 194 chr3L 12013877 intron rols - chr3L 12013974 intron rols - chr3L 12014071 intron rols - chr3L_7_12010001 chr3L_12010001 RAL-409_125b 1683 chr3L 12019279 12019344 chr3L 12019441 12019507 9 161 5.5 5.5 5.5 1.4 228 chr3L 12019279 intron rols - chr3L 12019393 intron rols - chr3L 12019507 intron rols - chr3L_9_12015001 chr3L_12015001 RAL-409_125b 1684 chr3L 12075379 12075454 chr3L 12075518 12075588 13 132 4.0 0.0 2.0 4.3 209 chr3L 12075379 intron Sema-5c - chr3L 12075484 intron Sema-5c - chr3L 12075588 intron Sema-5c - chr3L_13_12075001 chr3L_12075001 RAL-409_125b 1685 chr3L 12089033 12089110 chr3L 12089163 12089236 18 129 2.0 1.5 1.8 6.4 203 chr3L 12089033 exon CG17154 + chr3L 12089134 3` UTR CG17154 + chr3L 12089236 intergenic CG17154 + chr3L_18_12085001 chr3L_12085001 RAL-409_125b 1686 chr3L 12092355 12092421 chr3L 12092482 12092548 10 122 1.0 9.5 5.2 1.6 193 chr3L 12092355 intergenic not near genes chr3L 12092452 intergenic not near genes chr3L 12092548 intergenic not near genes chr3L_10_12090001 chr3L_12090001 RAL-409_125b 1687 chr3L 12103864 12103908 chr3L 12103990 12104034 10 124 3.0 3.5 3.2 2.4 170 chr3L 12103864 intergenic not near genes chr3L 12103949 intergenic not near genes chr3L 12104034 intergenic not near genes chr3L_10_12100001 chr3L_12100001 RAL-409_125b 1688 chr3L 12105947 12105965 chr3L 12106079 12106092 4 131 8.5 7.0 7.8 0.5 145 chr3L 12105947 intergenic not near genes chr3L 12106020 intergenic not near genes chr3L 12106092 intergenic not near genes chr3L_4_12105001 chr3L_12105001 RAL-409_125b 1689 chr3L 12105971 12106000 chr3L 12106072 12106136 12 125 2.5 6.5 4.5 2.2 165 chr3L 12105971 intergenic not near genes chr3L 12106054 intergenic not near genes chr3L 12106136 intergenic not near genes chr3L_12_12105001 chr3L_12105001 RAL-409_125b 1690 chr3L 12113782 12113797 chr3L 12113908 12113923 4 126 5.5 18.0 11.8 0.3 141 chr3L 12113782 intergenic not near genes chr3L 12113852 intergenic not near genes chr3L 12113923 intergenic not near genes chr3L_4_12110001 chr3L_12110001 RAL-409_125b 1691 chr3L 12115694 12115740 chr3L 12115850 12115897 8 155 9.5 2.5 6.0 1.1 203 chr3L 12115694 intergenic l(3)j2D3 + chr3L 12115796 intergenic l(3)j2D3 + chr3L 12115897 intergenic l(3)j2D3 + chr3L_8_12115001 chr3L_12115001 RAL-409_125b 1692 chr3L 12157132 12157185 chr3L 12158370 12158423 6 1238 55.0 40.5 47.8 0.1 1291 chr3L 12157132 3` UTR CG9760 - chr3L 12157778 3` UTR CG9760 - chr3L 12158423 intron CG9760 - chr3L_6_12155001 chr3L_12155001 RAL-409_125b 1693 chr3L 12158455 12158520 chr3L 12158718 12158786 19 268 22.5 20.0 21.2 0.9 331 chr3L 12158455 intron CG9760 - chr3L 12158620 intron CG9760 - chr3L 12158786 intron CG9760 - chr3L_19_12155001 chr3L_12155001 RAL-409_125b 1694 chr3L 12158779 12158796 chr3L 12160200 12160216 6 1423 72.5 107.0 89.8 0.1 1437 chr3L 12158779 intron CG9760 - chr3L 12159498 exon CG9760 - chr3L 12160216 intron CG9760 - chr3L_6_12155001 chr3L_12155001 RAL-409_125b 1695 chr3L 12158776 12158856 chr3L 12160217 12160276 31 1436 89.0 101.5 95.2 0.3 1500 chr3L 12158776 intron CG9760 - chr3L 12159526 exon CG9760 - chr3L 12160276 intron CG9760 - chr3L_31_12155001 chr3L_12155001 RAL-409_125b 1696 chr3L 12156447 12156456 chr3L 12160289 12160301 5 3841 43.0 67.0 55.0 0.1 3854 chr3L 12156447 3` UTR Nrx-IV + chr3L 12158374 intron CG9760 - chr3L 12160301 intron CG9760 - chr3L_5_12155001 chr3L_12155001 RAL-409_125b 1697 chr3L 12156431 12156492 chr3L 12160309 12160348 11 3848 55.5 58.5 57.0 0.2 3917 chr3L 12156431 3` UTR Nrx-IV + chr3L 12158390 intron CG9760 - chr3L 12160348 intron CG9760 - chr3L_11_12155001 chr3L_12155001 RAL-409_125b 1698 chr3L 12170745 12170787 chr3L 12170877 12170919 6 129 5.5 3.0 4.2 1.2 174 chr3L 12170745 intron Rh7 - chr3L 12170832 intron Rh7 - chr3L 12170919 intron Rh7 - chr3L_6_12170001 chr3L_12170001 RAL-409_125b 1699 chr3L 12186370 12186400 chr3L 12186536 12186561 5 164 5.5 7.0 6.2 0.7 191 chr3L 12186370 intron CG6910 + chr3L 12186466 intron CG6910 + chr3L 12186561 exon CG6910 + chr3L_5_12185001 chr3L_12185001 RAL-409_125b 1700 chr3L 12235817 12235858 chr3L 12235946 12235998 7 128 3.5 7.5 5.5 1.1 181 chr3L 12235817 intron app - chr3L 12235908 intron app - chr3L 12235998 intron app - chr3L_7_12235001 chr3L_12235001 RAL-409_125b 1701 chr3L 12300805 12300872 chr3L 12300989 12301052 16 186 4.5 4.5 4.5 2.9 247 chr3L 12300805 intergenic CR44550 + chr3L 12300928 intergenic CR44550 + chr3L 12301052 5` UTR CR44550 + chr3L_16_12300001 chr3L_12300001 RAL-409_125b 1702 chr3L 12321684 12321688 chr3L 12321824 12321828 4 140 1.5 7.5 4.5 0.7 144 chr3L 12321684 intergenic not near genes chr3L 12321756 intergenic not near genes chr3L 12321828 intergenic not near genes chr3L_4_12320001 chr3L_12320001 RAL-409_125b 1703 chr3L 12339522 12339573 chr3L 12339655 12339705 14 131 7.0 8.0 7.5 1.6 183 chr3L 12339522 3` UTR CrzR - chr3L 12339614 3` UTR CrzR - chr3L 12339705 3` UTR CrzR - chr3L_14_12335001 chr3L_12335001 RAL-409_125b 1704 chr3L 12369490 12369559 chr3L 12369624 12369694 11 137 3.5 3.0 3.2 2.6 204 chr3L 12369490 intron Ncc69 - chr3L 12369592 intron Ncc69 - chr3L 12369694 intron Ncc69 - chr3L_11_12365001 chr3L_12365001 RAL-409_125b 1705 chr3L 12435910 12435950 chr3L 12436339 12436402 13 448 5.0 6.5 5.8 1.9 492 chr3L 12435910 intergenic not near genes chr3L 12436156 intergenic not near genes chr3L 12436402 intergenic not near genes chr3L_13_12435001 chr3L_12435001 RAL-409_125b 1706 chr3L 12446230 12446298 chr3L 12446348 12446409 12 91 3.5 5.5 4.5 2.2 179 chr3L 12446230 intergenic not near genes chr3L 12446320 intergenic not near genes chr3L 12446409 intergenic not near genes chr3L_12_12445001 chr3L_12445001 RAL-409_125b 1707 chr3L 12467256 12467284 chr3L 12467391 12467398 4 126 18.5 16.0 17.2 0.2 142 chr3L 12467256 intron eyg - chr3L 12467327 intron eyg - chr3L 12467398 intron eyg - chr3L_4_12465001 chr3L_12465001 RAL-409_125b 1708 chr3L 12476252 12476265 chr3L 12476379 12476392 5 127 4.5 7.0 5.8 0.7 140 chr3L 12476252 intron CG10663 - chr3L 12476322 intron CG10663 - chr3L 12476392 intron CG10663 - chr3L_5_12475001 chr3L_12475001 RAL-409_125b 1709 chr3L 12476270 12476317 chr3L 12476364 12476443 15 124 2.5 3.5 3.0 3.8 173 chr3L 12476270 intron CG10663 - chr3L 12476356 intron CG10663 - chr3L 12476443 intron CG10663 - chr3L_15_12475001 chr3L_12475001 RAL-409_125b 1710 chr3L 12610959 12611014 chr3L 12611249 12611309 9 295 2.0 2.5 2.2 2.8 350 chr3L 12610959 intron caup + chr3L 12611134 intron caup + chr3L 12611309 intron caup + chr3L_9_12610001 chr3L_12610001 RAL-409_125b 1711 chr3L 12614561 12614598 chr3L 12614749 12614786 4 187 0.0 7.5 3.8 0.8 225 chr3L 12614561 intron caup + chr3L 12614674 intron caup + chr3L 12614786 intron caup + chr3L_4_12610001 chr3L_12610001 RAL-409_125b 1712 chr3L 12620958 12620983 chr3L 12621074 12621080 9 125 10.0 7.0 8.5 0.9 122 chr3L 12620958 3` UTR caup + chr3L 12621019 3` UTR caup + chr3L 12621080 3` UTR caup + chr3L_9_12620001 chr3L_12620001 RAL-409_125b 1713 chr3L 12626128 12626169 chr3L 12626285 12626328 8 158 6.5 1.5 4.0 1.6 200 chr3L 12626128 intergenic not near genes chr3L 12626228 intergenic not near genes chr3L 12626328 intergenic not near genes chr3L_8_12625001 chr3L_12625001 RAL-409_125b 1714 chr3L 12706594 12706653 chr3L 12706771 12706830 15 175 6.5 5.0 5.8 2.2 236 chr3L 12706594 intron mirr + chr3L 12706712 intron mirr + chr3L 12706830 intron mirr + chr3L_15_12705001 chr3L_12705001 RAL-409_125b 1715 chr3L 12720284 12720352 chr3L 12720419 12720487 12 133 10.5 10.5 10.5 1.0 203 chr3L 12720284 intergenic not near genes chr3L 12720386 intergenic not near genes chr3L 12720487 intergenic not near genes chr3L_12_12720001 chr3L_12720001 RAL-409_125b 1716 chr3L 12801937 12802007 chr3L 12802062 12802133 7 123 6.0 8.0 7.0 0.9 196 chr3L 12801937 intron Atg1 - chr3L 12802035 intron Atg1 - chr3L 12802133 intron Atg1 - chr3L_7_12800001 chr3L_12800001 RAL-409_125b 1717 chr3L 12867983 12868056 chr3L 12868119 12868142 14 127 7.5 8.0 7.8 1.6 159 chr3L 12867983 intergenic not near genes chr3L 12868062 intergenic not near genes chr3L 12868142 intergenic not near genes chr3L_14_12865001 chr3L_12865001 RAL-409_125b 1718 chr3L 12874886 12874953 chr3L 12877228 12877285 jockey 20 2339 3.0 5.0 4.0 4.0 2399 chr3L 12874886 intergenic not near genes chr3L 12876086 intergenic not near genes chr3L 12877285 intergenic not near genes chr3L_20_12875001 chr3L_12875001 RAL-409_125b 1719 chr3L 12894765 12894805 chr3L 12894892 12894933 16 123 8.0 8.5 8.2 1.7 168 chr3L 12894765 intergenic CG14118 + chr3L 12894849 intergenic CG14118 + chr3L 12894933 intergenic CG14118 + chr3L_16_12890001 chr3L_12890001 RAL-409_125b 1720 chr3L 12919260 12919310 chr3L 12924761 12924837 Rt1c 4 5514 3.0 4.5 3.8 0.8 5577 chr3L 12919260 intergenic not near genes chr3L 12922048 intergenic not near genes chr3L 12924837 intergenic not near genes chr3L_4_12920001 chr3L_12920001 RAL-409_125b 1721 chr3L 12929717 12929740 chr3L 12930063 12930106 8 361 0.0 6.5 3.2 1.9 389 chr3L 12929717 intergenic not near genes chr3L 12929912 intergenic not near genes chr3L 12930106 intergenic not near genes chr3L_8_12925001 chr3L_12925001 RAL-409_125b 1722 chr3L 12957741 12957816 chr3L 12962273 12962320 copia 15 4523 3.5 5.0 4.2 2.9 4579 chr3L 12957741 intergenic not near genes chr3L 12960030 intergenic not near genes chr3L 12962320 intergenic not near genes chr3L_15_12960001 chr3L_12960001 RAL-409_125b 1723 chr3L 12968146 12968201 chr3L 12968268 12968336 11 122 5.0 7.0 6.0 1.6 190 chr3L 12968146 intergenic Or69a - chr3L 12968241 intergenic not near genes chr3L 12968336 intergenic not near genes chr3L_11_12965001 chr3L_12965001 RAL-409_125b 1724 chr3L 12970939 12971016 chr3L 12971072 12971149 21 131 5.5 10.5 8.0 2.3 210 chr3L 12970939 intergenic CG10748 - chr3L 12971044 intergenic CG10748 - chr3L 12971149 intergenic CG10748 - chr3L_21_12970001 chr3L_12970001 RAL-409_125b 1725 chr3L 12978709 12978780 chr3L 12978838 12978909 9 127 3.0 0.0 1.5 3.6 200 chr3L 12978709 intergenic not near genes chr3L 12978809 intergenic not near genes chr3L 12978909 intergenic not near genes chr3L_9_12975001 chr3L_12975001 RAL-409_125b 1726 chr3L 13007659 13007717 chr3L 13007772 13007815 9 120 8.0 6.5 7.2 1.1 156 chr3L 13007659 exon CG11263 + chr3L 13007737 3` UTR CG11263 + chr3L 13007815 3` UTR CG11263 + chr3L_9_13005001 chr3L_13005001 RAL-409_125b 1727 chr3L 13026512 13026575 chr3L 13026653 13026705 10 139 5.0 5.0 5.0 1.7 193 chr3L 13026512 intergenic Zmynd10 - chr3L 13026608 intergenic Zmynd10 - chr3L 13026705 intergenic Zmynd10 - chr3L_10_13025001 chr3L_13025001 RAL-409_125b 1728 chr3L 13074001 13074018 chr3L 13074184 13074188 6 180 6.0 5.0 5.5 0.9 187 chr3L 13074001 intergenic not near genes chr3L 13074094 intergenic not near genes chr3L 13074188 intergenic not near genes chr3L_6_13070001 chr3L_13070001 RAL-409_125b 1729 chr3L 13074020 13074071 chr3L 13074183 13074204 11 167 0.5 5.0 2.8 2.9 184 chr3L 13074020 intergenic not near genes chr3L 13074112 intergenic not near genes chr3L 13074204 intergenic not near genes chr3L_11_13070001 chr3L_13070001 RAL-409_125b 1730 chr3L 13085008 13085081 chr3L 13085132 13085210 15 127 6.0 3.0 4.5 2.7 202 chr3L 13085008 intergenic not near genes chr3L 13085109 intergenic not near genes chr3L 13085210 intergenic not near genes chr3L_15_13085001 chr3L_13085001 RAL-409_125b 1731 chr3L 13137899 13137962 chr3L 13138032 13138100 11 134 5.5 4.0 4.8 1.9 201 chr3L 13137899 intergenic not near genes chr3L 13138000 intergenic not near genes chr3L 13138100 intergenic not near genes chr3L_11_13135001 chr3L_13135001 RAL-409_125b 1732 chr3L 13159253 13159283 chr3L 13159376 13159407 9 126 7.0 4.0 5.5 1.4 154 chr3L 13159253 intergenic not near genes chr3L 13159330 intergenic not near genes chr3L 13159407 intergenic not near genes chr3L_9_13155001 chr3L_13155001 RAL-409_125b 1733 chr3L 13178293 13178309 chr3L 13178446 13178462 5 151 6.0 1.0 3.5 1.1 169 chr3L 13178293 intergenic not near genes chr3L 13178378 intergenic not near genes chr3L 13178462 intergenic not near genes chr3L_5_13175001 chr3L_13175001 RAL-409_125b 1734 chr3L 13194024 13194092 chr3L 13194153 13194201 12 124 3.5 4.0 3.8 2.5 177 chr3L 13194024 intergenic not near genes chr3L 13194112 intergenic not near genes chr3L 13194201 intergenic not near genes chr3L_12_13190001 chr3L_13190001 RAL-409_125b 1735 chr3L 13199081 13199105 chr3L 13199210 13199219 5 124 1.5 9.0 5.2 0.8 138 chr3L 13199081 intergenic not near genes chr3L 13199150 intergenic not near genes chr3L 13199219 intergenic not near genes chr3L_5_13195001 chr3L_13195001 RAL-409_125b 1736 chr3L 13206202 13206259 chr3L 13206319 13206391 10 128 4.5 5.0 4.8 1.7 189 chr3L 13206202 intergenic not near genes chr3L 13206296 intergenic not near genes chr3L 13206391 intergenic not near genes chr3L_10_13205001 chr3L_13205001 RAL-409_125b 1737 chr3L 13213705 13213747 chr3L 13213812 13213841 11 115 6.5 5.5 6.0 1.6 136 chr3L 13213705 intergenic not near genes chr3L 13213773 intergenic not near genes chr3L 13213841 intergenic not near genes chr3L_11_13210001 chr3L_13210001 RAL-409_125b 1738 chr3L 13256783 13256843 chr3L 13257051 13257089 4 265 4.5 0.5 2.5 1.1 306 chr3L 13256783 intron caps + chr3L 13256936 intron caps + chr3L 13257089 intron caps + chr3L_4_13255001 chr3L_13255001 RAL-409_125b 1739 chr3L 13257208 13257285 chr3L 13257341 13257399 20 126 5.0 4.5 4.8 3.4 191 chr3L 13257208 intron caps + chr3L 13257304 intron caps + chr3L 13257399 intron caps + chr3L_20_13255001 chr3L_13255001 RAL-409_125b 1740 chr3L 13261777 13261839 chr3L 13261905 13261979 14 137 8.0 5.5 6.8 1.8 202 chr3L 13261777 intron caps + chr3L 13261878 intron caps + chr3L 13261979 intron caps + chr3L_14_13260001 chr3L_13260001 RAL-409_125b 1741 chr3L 13265156 13265211 chr3L 13265264 13265334 12 119 3.0 4.0 3.5 2.7 178 chr3L 13265156 intron caps + chr3L 13265245 5` UTR caps + chr3L 13265334 5` UTR caps + chr3L_12_13265001 chr3L_13265001 RAL-409_125b 1742 chr3L 13337139 13337145 chr3L 13337280 13337285 5 141 3.0 7.5 5.2 0.8 146 chr3L 13337139 intergenic not near genes chr3L 13337212 intergenic not near genes chr3L 13337285 intergenic not near genes chr3L_5_13335001 chr3L_13335001 RAL-409_125b 1743 chr3L 13477001 13477032 chr3L 13477128 13477159 9 125 0.0 4.5 2.2 2.8 158 chr3L 13477001 intergenic not near genes chr3L 13477080 intergenic stv + chr3L 13477159 intergenic stv + chr3L_9_13475001 chr3L_13475001 RAL-409_125b 1744 chr3L 13525119 13525179 chr3L 13532965 13533018 roo 9 7844 9.5 11.0 10.2 0.8 7899 chr3L 13525119 intergenic not near genes chr3L 13529068 intergenic not near genes chr3L 13533018 intergenic not near genes chr3L_9_13525001 chr3L_13525001 RAL-409_125b 1745 chr3L 13535871 13535920 chr3L 13535982 13536046 8 113 3.0 3.5 3.2 1.9 175 chr3L 13535871 intergenic not near genes chr3L 13535958 intergenic not near genes chr3L 13536046 intergenic not near genes chr3L_8_13535001 chr3L_13535001 RAL-409_125b 1746 chr3L 13629484 13629538 chr3L 13629639 13629693 21 157 4.5 7.0 5.8 3.1 209 chr3L 13629484 intron bru-3 - chr3L 13629588 intron bru-3 - chr3L 13629693 intron bru-3 - chr3L_21_13625001 chr3L_13625001 RAL-409_125b 1747 chr3L 13739986 13740045 chr3L 13740128 13740182 13 139 4.5 6.5 5.5 2.0 196 chr3L 13739986 intron bru-3 - chr3L 13740084 intron bru-3 - chr3L 13740182 intron bru-3 - chr3L_13_13740001 chr3L_13740001 RAL-409_125b 1748 chr3L 13804507 13804573 chr3L 13822843 13822857 roo 16 18331 6.5 9.0 7.8 1.8 18350 chr3L 13804507 intergenic not near genes chr3L 13813682 intergenic not near genes chr3L 13822857 intergenic not near genes chr3L_16_13810001 chr3L_13810001 RAL-409_125b 1749 chr3L 13827200 13827243 chr3L 13827329 13827341 6 127 9.5 5.0 7.2 0.7 141 chr3L 13827200 intergenic not near genes chr3L 13827270 intergenic not near genes chr3L 13827341 intergenic not near genes chr3L_6_13825001 chr3L_13825001 RAL-409_125b 1750 chr3L 13884329 13884383 chr3L 13884470 13884519 9 138 8.5 5.5 7.0 1.1 190 chr3L 13884329 intron dysc - chr3L 13884424 intron dysc - chr3L 13884519 intron dysc - chr3L_9_13880001 chr3L_13880001 RAL-409_125b 1751 chr3L 13901525 13901600 chr3L 13901652 13901709 11 123 2.0 2.5 2.2 3.4 184 chr3L 13901525 intron dysc - chr3L 13901617 intron dysc - chr3L 13901709 5` UTR dysc - chr3L_11_13900001 chr3L_13900001 RAL-409_125b 1752 chr3L 13920369 13920431 chr3L 13920499 13920561 20 128 6.5 6.0 6.2 2.8 192 chr3L 13920369 intron Rgl - chr3L 13920465 intron Rgl - chr3L 13920561 intron Rgl - chr3L_20_13920001 chr3L_13920001 RAL-409_125b 1753 chr3L 13931284 13931366 chr3L 13931438 13931521 7 153 2.5 2.0 2.2 2.2 237 chr3L 13931284 intron Gl + chr3L 13931402 intron Gl + chr3L 13931521 intron Gl + chr3L_7_13930001 chr3L_13930001 RAL-409_125b 1754 chr3L 13936453 13936650 chr3L 13936572 13936835 16 166 1.5 0.5 1.0 8.0 382 chr3L 13936453 intergenic not near genes chr3L 13936644 intergenic not near genes chr3L 13936835 intergenic not near genes chr3L_16_13935001 chr3L_13935001 RAL-409_125b 1755 chr3L 13990868 13990924 chr3L 13990994 13991044 9 115 6.5 7.0 6.8 1.2 176 chr3L 13990868 intron CG17364 - chr3L 13990956 intron CG17364 - chr3L 13991044 intron CG17364 - chr3L_9_13990001 chr3L_13990001 RAL-409_125b 1756 chr3L 13993964 13994012 chr3L 13994094 13994142 9 129 0.5 4.0 2.2 2.8 178 chr3L 13993964 intergenic 26-29-p + chr3L 13994053 intergenic 26-29-p + chr3L 13994142 intergenic 26-29-p + chr3L_9_13990001 chr3L_13990001 RAL-409_125b 1757 chr3L 14056732 14056744 chr3L 14056884 14056896 6 152 7.0 6.0 6.5 0.8 164 chr3L 14056732 intron CG32138 + chr3L 14056814 intron CG32138 + chr3L 14056896 intron CG32138 + chr3L_6_14055001 chr3L_14055001 RAL-409_125b 1758 chr3L 14061620 14061681 chr3L 14061759 14061817 8 135 7.5 3.0 5.2 1.3 197 chr3L 14061620 intron CG32138 + chr3L 14061718 intron CG32138 + chr3L 14061817 intron CG32138 + chr3L_8_14060001 chr3L_14060001 RAL-409_125b 1759 chr3L 14092700 14092758 chr3L 14092833 14092891 4 133 5.0 0.5 2.8 1.1 191 chr3L 14092700 intergenic not near genes chr3L 14092796 intergenic not near genes chr3L 14092891 intergenic not near genes chr3L_4_14090001 chr3L_14090001 RAL-409_125b 1760 chr3L 14174066 14174088 chr3L 14174192 14174214 7 126 11.0 6.5 8.8 0.7 148 chr3L 14174066 intergenic not near genes chr3L 14174140 intergenic not near genes chr3L 14174214 intergenic not near genes chr3L_7_14170001 chr3L_14170001 RAL-409_125b 1761 chr3L 14236000 14236044 chr3L 14236187 14236220 9 185 12.0 4.0 8.0 1.0 220 chr3L 14236000 intergenic CG34244 - chr3L 14236110 intergenic CG34244 - chr3L 14236220 intergenic CG34244 -,CG7906 + chr3L_9_14235001 chr3L_14235001 RAL-409_125b 1762 chr3L 14239946 14240003 chr3L 14240093 14240141 11 143 3.5 6.0 4.8 1.9 195 chr3L 14239946 intergenic not near genes chr3L 14240044 intergenic not near genes chr3L 14240141 intergenic not near genes chr3L_11_14240001 chr3L_14240001 RAL-409_125b 1763 chr3L 14245530 14245577 chr3L 14245674 14245716 1360 9 139 7.0 7.0 7.0 1.1 186 chr3L 14245530 3` UTR CR44561 - chr3L 14245623 3` UTR CR44561 - chr3L 14245716 intergenic CR44561 -,CR44560 + chr3L_9_14245001 chr3L_14245001 RAL-409_125b 1764 chr3L 14267379 14267402 chr3L 14271836 14271864 F-element 5 4459 5.0 0.0 2.5 1.4 4485 chr3L 14267379 intergenic not near genes chr3L 14269622 intergenic not near genes chr3L 14271864 intergenic not near genes chr3L_5_14265001 chr3L_14265001 RAL-409_125b 1765 chr3L 14282544 14282597 chr3L 14282668 14282718 18 124 9.0 8.0 8.5 1.9 174 chr3L 14282544 intron fz + chr3L 14282631 intron fz + chr3L 14282718 intron fz + chr3L_18_14280001 chr3L_14280001 RAL-409_125b 1766 chr3L 14295948 14296003 chr3L 14296473 14296539 roo 9 530 6.0 6.0 6.0 1.3 591 chr3L 14295948 intron fz + chr3L 14296244 intron fz + chr3L 14296539 intron fz + chr3L_9_14295001 chr3L_14295001 RAL-409_125b 1767 chr3L 14312002 14312024 chr3L 14316840 14316847 X-element 4 4837 5.0 4.5 4.8 0.7 4845 chr3L 14312002 exon fz + chr3L 14314424 intron fz + chr3L 14316847 intron fz + chr3L_4_14310001 chr3L_14310001 RAL-409_125b 1768 chr3L 14326929 14326988 chr3L 14327105 14327174 12 184 4.0 5.0 4.5 2.2 245 chr3L 14326929 intron fz + chr3L 14327052 intron fz + chr3L 14327174 intron fz + chr3L_12_14325001 chr3L_14325001 RAL-409_125b 1769 chr3L 14356485 14356545 chr3L 14356605 14356670 10 124 6.0 6.5 6.2 1.4 185 chr3L 14356485 intron fz + chr3L 14356578 intron fz + chr3L 14356670 intron fz + chr3L_10_14355001 chr3L_14355001 RAL-409_125b 1770 chr3L 14381089 14381141 chr3L 14381401 14381441 10 309 7.5 9.0 8.2 1.1 352 chr3L 14381089 intergenic not near genes chr3L 14381265 intergenic not near genes chr3L 14381441 intergenic CG43120 + chr3L_10_14380001 chr3L_14380001 RAL-409_125b 1771 chr3L 14387649 14387677 chr3L 14387829 14387872 7 193 2.0 6.5 4.2 1.3 223 chr3L 14387649 intergenic not near genes chr3L 14387760 intergenic not near genes chr3L 14387872 intergenic not near genes chr3L_7_14385001 chr3L_14385001 RAL-409_125b 1772 chr3L 14411808 14411868 chr3L 14411939 14412006 14 137 3.5 5.5 4.5 2.5 198 chr3L 14411808 exon CG3919 + chr3L 14411907 intron CG3919 + chr3L 14412006 intron CG3919 + chr3L_14_14410001 chr3L_14410001 RAL-409_125b 1773 chr3L 14441573 14441624 chr3L 14441761 14441825 8 197 4.5 4.5 4.5 1.5 252 chr3L 14441573 intron bbg - chr3L 14441699 intron bbg - chr3L 14441825 intron bbg - chr3L_8_14440001 chr3L_14440001 RAL-409_125b 1774 chr3L 14455211 14455258 chr3L 14455341 14455381 10 127 4.0 9.0 6.5 1.3 170 chr3L 14455211 intron bbg - chr3L 14455296 intron bbg - chr3L 14455381 intron bbg - chr3L_10_14455001 chr3L_14455001 RAL-409_125b 1775 chr3L 14462835 14462911 chr3L 14462973 14463049 9 134 3.0 3.0 3.0 2.2 214 chr3L 14462835 intron bbg - chr3L 14462942 intron bbg - chr3L 14463049 intron bbg - chr3L_9_14460001 chr3L_14460001 RAL-409_125b 1776 chr3L 14468416 14468471 chr3L 14473672 14473727 copia 12 5254 6.0 7.0 6.5 1.6 5311 chr3L 14468416 intron bbg - chr3L 14471072 intron bbg - chr3L 14473727 intron bbg - chr3L_12_14470001 chr3L_14470001 RAL-409_125b 1777 chr3L 14485971 14486048 chr3L 14486102 14486179 9 126 4.0 2.0 3.0 2.2 208 chr3L 14485971 intron bbg - chr3L 14486075 intron bbg - chr3L 14486179 intron bbg - chr3L_9_14485001 chr3L_14485001 RAL-409_125b 1778 chr3L 14519540 14519620 chr3L 14519679 14519759 16 138 7.0 4.5 5.8 2.4 219 chr3L 14519540 intron bbg - chr3L 14519650 intron bbg - chr3L 14519759 intron,3` UTR bbg -,CG4613 - chr3L_16_14515001 chr3L_14515001 RAL-409_125b 1779 chr3L 14546594 14546815 chr3L 14546690 14546936 16 127 2.5 2.0 2.2 5.0 342 chr3L 14546594 intron CG9238 - chr3L 14546765 intron CG9238 - chr3L 14546936 intron CG9238 - chr3L_16_14545001 chr3L_14545001 RAL-409_125b 1780 chr3L 14576178 14576193 chr3L 14576356 14576358 6 176 1.0 12.5 6.8 0.8 180 chr3L 14576178 intergenic not near genes chr3L 14576268 intergenic not near genes chr3L 14576358 intergenic not near genes chr3L_6_14575001 chr3L_14575001 RAL-409_125b 1781 chr3L 14578383 14578441 chr3L 14578563 14578615 18 178 7.0 4.0 5.5 2.8 232 chr3L 14578383 intergenic not near genes chr3L 14578499 intergenic not near genes chr3L 14578615 intergenic not near genes chr3L_18_14575001 chr3L_14575001 RAL-409_125b 1782 chr3L 14623701 14623740 chr3L 14623845 14623904 5 158 5.0 8.0 6.5 0.7 203 chr3L 14623701 intron CG9628 + chr3L 14623802 intron CG9628 + chr3L 14623904 intron CG9628 + chr3L_5_14620001 chr3L_14620001 RAL-409_125b 1783 chr3L 14627188 14627218 chr3L 14627320 14627338 4 132 4.5 7.5 6.0 0.6 150 chr3L 14627188 intron CG9628 + chr3L 14627263 intron CG9628 + chr3L 14627338 exon CG9628 + chr3L_4_14625001 chr3L_14625001 RAL-409_125b 1784 chr3L 14646911 14646985 chr3L 14647038 14647084 5 116 3.5 2.0 2.8 1.3 173 chr3L 14646911 intron dlp + chr3L 14646998 intron dlp + chr3L 14647084 intron dlp + chr3L_5_14645001 chr3L_14645001 RAL-409_125b 1785 chr3L 14654679 14654712 chr3L 14654808 14654834 11 130 4.0 10.0 7.0 1.4 155 chr3L 14654679 intron dlp + chr3L 14654756 intron dlp + chr3L 14654834 intron dlp + chr3L_11_14650001 chr3L_14650001 RAL-409_125b 1786 chr3L 14684582 14684639 chr3L 14684724 14684771 15 135 8.5 8.0 8.2 1.6 189 chr3L 14684582 intron ome + chr3L 14684676 intron ome + chr3L 14684771 intron,5` UTR ome +,CG5048 + chr3L_15_14680001 chr3L_14680001 RAL-409_125b 1787 chr3L 14721197 14721204 chr3L 14723044 14723075 Rt1c 4 1872 4.0 6.5 5.2 0.6 1878 chr3L 14721197 intron ome + chr3L 14722136 intron ome + chr3L 14723075 intron ome + chr3L_4_14720001 chr3L_14720001 RAL-409_125b 1788 chr3L 14725532 14725615 chr3L 14728588 14728659 Doc 12 3049 0.0 6.0 3.0 3.0 3127 chr3L 14725532 intron ome + chr3L 14727096 intron ome + chr3L 14728659 intron ome + chr3L_12_14725001 chr3L_14725001 RAL-409_125b 1789 chr3L 14740847 14740908 chr3L 14740986 14741047 12 138 6.5 3.0 4.8 2.1 200 chr3L 14740847 intron ome + chr3L 14740947 intron ome + chr3L 14741047 intron ome + chr3L_12_14740001 chr3L_14740001 RAL-409_125b 1790 chr3L 14803327 14803360 chr3L 14803440 14803486 9 127 8.5 2.5 5.5 1.4 159 chr3L 14803327 5` UTR gnu - chr3L 14803406 intergenic gnu - chr3L 14803486 intergenic gnu - chr3L_9_14800001 chr3L_14800001 RAL-409_125b 1791 chr3L 14804298 14804337 chr3L 14804473 14804517 9 179 7.0 3.5 5.2 1.5 219 chr3L 14804298 intergenic not near genes chr3L 14804408 intergenic not near genes chr3L 14804517 intergenic not near genes chr3L_9_14800001 chr3L_14800001 RAL-409_125b 1792 chr3L 14809151 14809213 chr3L 14809282 14809339 17 129 6.5 5.5 6.0 2.4 188 chr3L 14809151 intron CG17839 + chr3L 14809245 intron CG17839 + chr3L 14809339 intron CG17839 + chr3L_17_14805001 chr3L_14805001 RAL-409_125b 1793 chr3L 14866791 14866826 chr3L 14866926 14866957 10 136 2.0 6.0 4.0 2.0 166 chr3L 14866791 exon CG17839 + chr3L 14866874 intron CG17839 + chr3L 14866957 intron CG17839 + chr3L_10_14865001 chr3L_14865001 RAL-409_125b 1794 chr3L 14922060 14922074 chr3L 14922218 14922228 5 157 15.0 0.0 7.5 0.6 168 chr3L 14922060 intron DCX-EMAP + chr3L 14922144 intron DCX-EMAP + chr3L 14922228 intron DCX-EMAP + chr3L_5_14920001 chr3L_14920001 RAL-409_125b 1795 chr3L 14922090 14922130 chr3L 14922217 14922288 5 141 7.0 0.0 3.5 1.1 198 chr3L 14922090 intron DCX-EMAP + chr3L 14922189 intron DCX-EMAP + chr3L 14922288 intron DCX-EMAP + chr3L_5_14920001 chr3L_14920001 RAL-409_125b 1796 chr3L 14933415 14933453 chr3L 14933537 14933580 5 128 1.5 5.5 3.5 1.1 165 chr3L 14933415 intron DCX-EMAP + chr3L 14933498 intron DCX-EMAP + chr3L 14933580 intron DCX-EMAP + chr3L_5_14930001 chr3L_14930001 RAL-409_125b 1797 chr3L 14953012 14953077 chr3L 14953148 14953214 10 135 2.5 3.5 3.0 2.5 202 chr3L 14953012 intergenic not near genes chr3L 14953113 intergenic not near genes chr3L 14953214 intergenic not near genes chr3L_10_14950001 chr3L_14950001 RAL-409_125b 1798 chr3L 14957618 14957635 chr3L 14957794 14957816 6 180 6.5 1.0 3.8 1.2 198 chr3L 14957618 intergenic not near genes chr3L 14957717 intergenic not near genes chr3L 14957816 intergenic not near genes chr3L_6_14955001 chr3L_14955001 RAL-409_125b 1799 chr3L 14970719 14970763 chr3L 14971079 14971123 F-element 6 359 3.5 0.5 2.0 2.0 404 chr3L 14970719 intergenic Tom + chr3L 14970921 intergenic not near genes chr3L 14971123 intergenic not near genes chr3L_6_14970001 chr3L_14970001 RAL-409_125b 1800 chr3L 15056690 15056702 chr3L 15056904 15056916 Transib-N1_DM 4 212 1.0 5.0 3.0 1.0 226 chr3L 15056690 intron Sytbeta - chr3L 15056803 intron Sytbeta - chr3L 15056916 intron Sytbeta - chr3L_4_15055001 chr3L_15055001 RAL-409_125b 1801 chr3L 15085013 15085078 chr3L 15086224 15086258 1360 16 1209 9.5 7.0 8.2 1.7 1245 chr3L 15085013 intron cp309 - chr3L 15085636 intron cp309 - chr3L 15086258 intron cp309 - chr3L_16_15085001 chr3L_15085001 RAL-409_125b 1802 chr3L 15141105 15141173 chr3L 15141525 15141583 12 416 4.5 7.0 5.8 1.8 478 chr3L 15141105 intron Pdi - chr3L 15141344 intron Pdi - chr3L 15141583 intron Pdi - chr3L_12_15140001 chr3L_15140001 RAL-409_125b 1803 chr3L 15146118 15146173 chr3L 15146240 15146312 11 125 2.5 7.0 4.8 1.9 194 chr3L 15146118 3` UTR Pex3 + chr3L 15146215 3` UTR Pex3 + chr3L 15146312 3` UTR Pex3 + chr3L_11_15145001 chr3L_15145001 RAL-409_125b 1804 chr3L 15151172 15151238 chr3L 15151406 15151441 12 230 4.0 9.0 6.5 1.6 269 chr3L 15151172 intron FucTA + chr3L 15151306 intron FucTA + chr3L 15151441 intron FucTA + chr3L_12_15150001 chr3L_15150001 RAL-409_125b 1805 chr3L 15164985 15165003 chr3L 15165133 15165151 5 146 9.5 0.0 4.8 0.9 166 chr3L 15164985 intergenic not near genes chr3L 15165068 intergenic not near genes chr3L 15165151 intergenic not near genes chr3L_5_15165001 chr3L_15165001 RAL-409_125b 1806 chr3L 15219698 15219768 chr3L 15219830 15219895 7 130 5.0 4.5 4.8 1.2 197 chr3L 15219698 intergenic not near genes chr3L 15219796 intergenic not near genes chr3L 15219895 intergenic not near genes chr3L_7_15215001 chr3L_15215001 RAL-409_125b 1807 chr3L 15257387 15257439 chr3L 15257650 15257702 8 261 4.0 1.5 2.8 2.1 315 chr3L 15257387 intergenic not near genes chr3L 15257544 intergenic not near genes chr3L 15257702 intergenic not near genes chr3L_8_15255001 chr3L_15255001 RAL-409_125b 1808 chr3L 15304344 15304420 chr3L 15304471 15304537 13 128 7.0 2.5 4.8 2.2 193 chr3L 15304344 5` UTR CG7255 + chr3L 15304440 5` UTR CG7255 + chr3L 15304537 5` UTR CG7255 + chr3L_13_15300001 chr3L_15300001 RAL-409_125b 1809 chr3L 15384912 15384981 chr3L 15385090 15385109 21 169 5.0 1.0 3.0 5.2 197 chr3L 15384912 intergenic not near genes chr3L 15385010 intergenic not near genes chr3L 15385109 intergenic not near genes chr3L_21_15385001 chr3L_15385001 RAL-409_125b 1810 chr3L 15405974 15406050 chr3L 15406106 15406148 16 128 2.0 4.5 3.2 3.8 174 chr3L 15405974 intergenic not near genes chr3L 15406061 intergenic not near genes chr3L 15406148 intergenic not near genes chr3L_16_15405001 chr3L_15405001 RAL-409_125b 1811 chr3L 15418006 15418063 chr3L 15418124 15418177 11 116 5.5 5.0 5.2 1.8 171 chr3L 15418006 intergenic not near genes chr3L 15418092 intergenic not near genes chr3L 15418177 intergenic not near genes chr3L_11_15415001 chr3L_15415001 RAL-409_125b 1812 chr3L 15422471 15422505 chr3L 15422596 15422634 10 130 2.0 8.0 5.0 1.7 163 chr3L 15422471 intergenic not near genes chr3L 15422552 intergenic not near genes chr3L 15422634 intergenic not near genes chr3L_10_15420001 chr3L_15420001 RAL-409_125b 1813 chr3L 15423715 15423778 chr3L 15426609 15426672 opus 12 2892 6.0 2.5 4.2 2.3 2957 chr3L 15423715 intergenic not near genes chr3L 15425194 intergenic not near genes chr3L 15426672 intergenic not near genes chr3L_12_15425001 chr3L_15425001 RAL-409_125b 1814 chr3L 15444608 15444634 chr3L 15444752 15444777 7 140 13.5 6.0 9.8 0.6 169 chr3L 15444608 intergenic not near genes chr3L 15444692 intergenic not near genes chr3L 15444777 intergenic not near genes chr3L_7_15440001 chr3L_15440001 RAL-409_125b 1815 chr3L 15444643 15444681 chr3L 15444746 15444803 13 133 7.0 5.0 6.0 1.9 160 chr3L 15444643 intergenic not near genes chr3L 15444723 intergenic not near genes chr3L 15444803 intergenic not near genes chr3L_13_15440001 chr3L_15440001 RAL-409_125b 1816 chr3L 15465989 15466138 chr3L 15466121 15466284 16 151 0.0 0.0 0.0 16.0 295 chr3L 15465989 intergenic not near genes chr3L 15466136 intergenic not near genes chr3L 15466284 intergenic not near genes chr3L_16_15465001 chr3L_15465001 RAL-409_125b 1817 chr3L 15466475 15466526 chr3L 15466604 15466660 11 129 2.0 6.0 4.0 2.2 185 chr3L 15466475 intergenic not near genes chr3L 15466568 intergenic not near genes chr3L 15466660 intergenic not near genes chr3L_11_15465001 chr3L_15465001 RAL-409_125b 1818 chr3L 15474645 15474687 chr3L 15474827 15474841 4 177 1.5 0.0 0.8 2.2 196 chr3L 15474645 intergenic not near genes chr3L 15474743 intergenic not near genes chr3L 15474841 intergenic not near genes chr3L_4_15470001 chr3L_15470001 RAL-409_125b 1819 chr3L 15482563 15482616 chr3L 15482684 15482747 9 127 9.0 7.5 8.2 1.0 184 chr3L 15482563 intergenic not near genes chr3L 15482655 intergenic not near genes chr3L 15482747 intergenic not near genes chr3L_9_15480001 chr3L_15480001 RAL-409_125b 1820 chr3L 15483021 15483039 chr3L 15483268 15483286 4 244 11.0 8.0 9.5 0.4 265 chr3L 15483021 intergenic not near genes chr3L 15483154 intergenic not near genes chr3L 15483286 intergenic not near genes chr3L_4_15480001 chr3L_15480001 RAL-409_125b 1821 chr3L 15483043 15483085 chr3L 15483258 15483325 9 239 5.0 6.0 5.5 1.4 282 chr3L 15483043 intergenic not near genes chr3L 15483184 intergenic not near genes chr3L 15483325 intergenic not near genes chr3L_9_15480001 chr3L_15480001 RAL-409_125b 1822 chr3L 15486895 15486967 chr3L 15487031 15487091 8 133 7.5 8.0 7.8 0.9 196 chr3L 15486895 intergenic not near genes chr3L 15486993 intergenic not near genes chr3L 15487091 intergenic not near genes chr3L_8_15485001 chr3L_15485001 RAL-409_125b 1823 chr3L 15493265 15493337 chr3L 15493410 15493477 4 144 2.0 0.0 1.0 2.0 212 chr3L 15493265 exon CG12355 - chr3L 15493371 intron CG12355 - chr3L 15493477 5` UTR CG12355 - chr3L_4_15490001 chr3L_15490001 RAL-409_125b 1824 chr3L 15536578 15536644 chr3L 15536704 15536770 14 127 7.5 6.0 6.8 1.8 192 chr3L 15536578 intron CrebA + chr3L 15536674 intron CrebA + chr3L 15536770 intron CrebA + chr3L_14_15535001 chr3L_15535001 RAL-409_125b 1825 chr3L 15541571 15541645 chr3L 15541712 15541786 12 141 8.0 1.0 4.5 2.2 215 chr3L 15541571 intron CrebA + chr3L 15541678 intron CrebA + chr3L 15541786 intron CrebA + chr3L_12_15540001 chr3L_15540001 RAL-409_125b 1826 chr3L 15541916 15541963 chr3L 15542047 15542107 6 140 2.0 4.5 3.2 1.4 191 chr3L 15541916 intron CrebA + chr3L 15542012 intron CrebA + chr3L 15542107 intron CrebA + chr3L_6_15540001 chr3L_15540001 RAL-409_125b 1827 chr3L 15600149 15600193 chr3L 15600300 15600337 11 148 3.0 6.0 4.5 2.0 188 chr3L 15600149 intron RhoGAP71E + chr3L 15600243 intron RhoGAP71E + chr3L 15600337 intron RhoGAP71E + chr3L_11_15600001 chr3L_15600001 RAL-409_125b 1828 chr3L 15628123 15628196 chr3L 15628279 15628352 14 155 6.5 7.0 6.8 1.8 229 chr3L 15628123 intron comm3 - chr3L 15628238 intron comm3 - chr3L 15628352 intron comm3 - chr3L_14_15625001 chr3L_15625001 RAL-409_125b 1829 chr3L 15633163 15633211 chr3L 15633288 15633336 5 127 2.5 2.5 2.5 1.4 173 chr3L 15633163 intron comm3 - chr3L 15633250 intron comm3 - chr3L 15633336 intron comm3 - chr3L_5_15630001 chr3L_15630001 RAL-409_125b 1830 chr3L 15691369 15691431 chr3L 15691501 15691563 13 125 8.0 8.5 8.2 1.4 194 chr3L 15691369 intron CG34451 - chr3L 15691466 intron CG34451 - chr3L 15691563 intron CG34451 - chr3L_13_15690001 chr3L_15690001 RAL-409_125b 1831 chr3L 15696235 15696304 chr3L 15696430 15696500 11 184 5.0 7.0 6.0 1.6 265 chr3L 15696235 intergenic not near genes chr3L 15696368 intergenic not near genes chr3L 15696500 intergenic not near genes chr3L_11_15695001 chr3L_15695001 RAL-409_125b 1832 chr3L 15737331 15737393 chr3L 15737471 15737527 8 139 4.5 5.5 5.0 1.3 196 chr3L 15737331 intergenic not near genes chr3L 15737429 intergenic not near genes chr3L 15737527 intergenic not near genes chr3L_8_15735001 chr3L_15735001 RAL-409_125b 1833 chr3L 15754442 15754603 chr3L 15754584 15754736 6 134 0.0 1.5 0.8 3.3 294 chr3L 15754442 intergenic not near genes chr3L 15754589 intergenic not near genes chr3L 15754736 intergenic not near genes chr3L_6_15750001 chr3L_15750001 RAL-409_125b 1834 chr3L 15757298 15757308 chr3L 15757426 15757436 6 128 8.5 4.0 6.2 0.8 138 chr3L 15757298 intergenic not near genes chr3L 15757367 intergenic not near genes chr3L 15757436 intergenic not near genes chr3L_6_15755001 chr3L_15755001 RAL-409_125b 1835 chr3L 15769119 15769123 chr3L 15769238 15769264 4 129 0.0 3.5 1.8 1.4 145 chr3L 15769119 intergenic not near genes chr3L 15769192 intergenic not near genes chr3L 15769264 intergenic not near genes chr3L_4_15765001 chr3L_15765001 RAL-409_125b 1836 chr3L 15774854 15774885 chr3L 15774994 15775025 10 140 3.0 4.5 3.8 2.1 171 chr3L 15774854 intergenic not near genes chr3L 15774940 intergenic not near genes chr3L 15775025 intergenic not near genes chr3L_10_15770001 chr3L_15770001 RAL-409_125b 1837 chr3L 15778478 15778546 chr3L 15778674 15778747 12 194 3.0 6.0 4.5 2.2 269 chr3L 15778478 intergenic not near genes chr3L 15778612 intergenic not near genes chr3L 15778747 intergenic not near genes chr3L_12_15775001 chr3L_15775001 RAL-409_125b 1838 chr3L 15781607 15781687 chr3L 15781788 15781886 6 188 1.5 0.0 0.8 3.3 279 chr3L 15781607 intergenic not near genes chr3L 15781746 intergenic not near genes chr3L 15781886 intergenic not near genes chr3L_6_15780001 chr3L_15780001 RAL-409_125b 1839 chr3L 15799272 15799333 chr3L 15799525 15799597 12 254 10.5 4.0 7.2 1.5 325 chr3L 15799272 intergenic not near genes chr3L 15799434 intergenic not near genes chr3L 15799597 intergenic not near genes chr3L_12_15795001 chr3L_15795001 RAL-409_125b 1840 chr3L 15833806 15833867 chr3L 15833995 15834056 10 190 32.0 31.0 31.5 0.3 250 chr3L 15833806 3` UTR,3` UTR CG12713 +,CG18081 - chr3L 15833931 3` UTR,3` UTR CG12713 +,CG18081 - chr3L 15834056 3` UTR CG18081 - chr3L_10_15830001 chr3L_15830001 RAL-409_125b 1841 chr3L 15883163 15883204 chr3L 15883506 15883547 6 342 6.5 4.5 5.5 0.9 384 chr3L 15883163 intron pHCl - chr3L 15883355 intron pHCl - chr3L 15883547 intron pHCl - chr3L_6_15880001 chr3L_15880001 RAL-409_125b 1842 chr3L 15899243 15899263 chr3L 15899790 15899822 jockey 8 582 2.5 3.5 3.0 2.0 579 chr3L 15899243 intergenic pHCl - chr3L 15899532 intergenic not near genes chr3L 15899822 intergenic sff - chr3L_8_15895001 chr3L_15895001 RAL-409_125b 1843 chr3L 15903471 15903504 chr3L 15903646 15903679 4 171 1.5 0.0 0.8 2.2 208 chr3L 15903471 intron sff - chr3L 15903575 intron sff - chr3L 15903679 intron sff - chr3L_4_15900001 chr3L_15900001 RAL-409_125b 1844 chr3L 15916795 15916863 chr3L 15916922 15916985 13 123 5.0 2.0 3.5 2.9 190 chr3L 15916795 intron sff - chr3L 15916890 intron sff - chr3L 15916985 intron sff - chr3L_13_15915001 chr3L_15915001 RAL-409_125b 1845 chr3L 15929162 15929219 chr3L 15938359 15938416 roo 11 9196 7.5 6.0 6.8 1.4 9254 chr3L 15929162 intron Pka-C3 - chr3L 15933789 intron Pka-C3 - chr3L 15938416 intron Pka-C3 - chr3L_11_15930001 chr3L_15930001 RAL-409_125b 1846 chr3L 15946465 15946537 chr3L 15946601 15946673 13 133 8.0 3.5 5.8 1.9 208 chr3L 15946465 intron Pka-C3 - chr3L 15946569 intron Pka-C3 - chr3L 15946673 intron Pka-C3 - chr3L_13_15945001 chr3L_15945001 RAL-409_125b 1847 chr3L 15968181 15968244 chr3L 15968303 15968377 13 122 4.0 5.5 4.8 2.2 196 chr3L 15968181 intergenic CG10516 +,l(3)72Ab - chr3L 15968279 5` UTR CG10516 + chr3L 15968377 exon CG10516 + chr3L_13_15965001 chr3L_15965001 RAL-409_125b 1848 chr3L 15989195 15989224 chr3L 15989328 15989356 6 133 3.0 6.5 4.8 1.0 161 chr3L 15989195 intron Hip14 + chr3L 15989276 intron Hip14 + chr3L 15989356 intron Hip14 + chr3L_6_15985001 chr3L_15985001 RAL-409_125b 1849 chr3L 16010745 16010783 chr3L 16010869 16010904 12 122 13.0 8.0 10.5 1.0 159 chr3L 16010745 intron mib1 - chr3L 16010824 intron mib1 - chr3L 16010904 intron mib1 - chr3L_12_16010001 chr3L_16010001 RAL-409_125b 1850 chr3L 16070691 16070756 chr3L 16070818 16070868 7 124 6.0 4.0 5.0 1.2 177 chr3L 16070691 intron Mbs + chr3L 16070780 intron Mbs + chr3L 16070868 exon Mbs + chr3L_7_16070001 chr3L_16070001 RAL-409_125b 1851 chr3L 16128792 16128820 chr3L 16129026 16129084 6 253 4.0 7.0 5.5 0.9 292 chr3L 16128792 intergenic Pgm - chr3L 16128938 intergenic Pgm - chr3L 16129084 intergenic not near genes chr3L_6_16125001 chr3L_16125001 RAL-409_125b 1852 chr3L 16145747 16145781 chr3L 16145904 16145928 6 155 4.0 11.0 7.5 0.7 181 chr3L 16145747 intron CG5151 - chr3L 16145838 intron CG5151 - chr3L 16145928 intron CG5151 - chr3L_6_16145001 chr3L_16145001 RAL-409_125b 1853 chr3L 16184068 16184128 chr3L 16188937 16188997 X-element 12 4863 5.5 5.0 5.2 1.9 4929 chr3L 16184068 intergenic not near genes chr3L 16186532 intergenic not near genes chr3L 16188997 intergenic not near genes chr3L_12_16185001 chr3L_16185001 RAL-409_125b 1854 chr3L 16198365 16198412 chr3L 16198500 16198547 16 133 4.5 6.0 5.2 2.6 182 chr3L 16198365 intron CG33687 + chr3L 16198456 exon CG33687 + chr3L 16198547 exon CG33687 + chr3L_16_16195001 chr3L_16195001 RAL-409_125b 1855 chr3L 16212776 16212778 chr3L 16212912 16212919 6 140 13.5 0.0 6.8 0.8 143 chr3L 16212776 intergenic CG13073 - chr3L 16212848 intergenic CG13073 - chr3L 16212919 intergenic CG13073 - chr3L_6_16210001 chr3L_16210001 RAL-409_125b 1856 chr3L 16212779 16212837 chr3L 16212910 16212978 12 137 7.0 0.0 3.5 2.7 199 chr3L 16212779 intergenic CG13073 - chr3L 16212878 intergenic CG13073 - chr3L 16212978 intergenic CG13073 - chr3L_12_16210001 chr3L_16210001 RAL-409_125b 1857 chr3L 16240708 16240779 chr3L 16240890 16240961 14 181 0.0 12.0 6.0 2.0 253 chr3L 16240708 intergenic not near genes chr3L 16240834 intergenic not near genes chr3L 16240961 intergenic not near genes chr3L_14_16240001 chr3L_16240001 RAL-409_125b 1858 chr3L 16279040 16279078 chr3L 16279171 16279201 9 130 7.0 4.5 5.8 1.3 161 chr3L 16279040 exon CG13050 - chr3L 16279120 intron CG13050 - chr3L 16279201 exon CG13050 - chr3L_9_16275001 chr3L_16275001 RAL-409_125b 1859 chr3L 16340221 16340286 chr3L 16340389 16340453 17 170 7.5 5.5 6.5 2.3 232 chr3L 16340221 intron CG4998 + chr3L 16340337 intron CG4998 + chr3L 16340453 exon CG4998 + chr3L_17_16340001 chr3L_16340001 RAL-409_125b 1860 chr3L 16366759 16366796 chr3L 16366916 16366952 8 172 6.0 6.0 6.0 1.1 193 chr3L 16366759 exon Cpr72Ec - chr3L 16366856 exon Cpr72Ec - chr3L 16366952 exon Cpr72Ec - chr3L_8_16365001 chr3L_16365001 RAL-409_125b 1861 chr3L 16384490 16384511 chr3L 16384602 16384616 4 110 8.5 9.5 9.0 0.4 126 chr3L 16384490 intron CG4729 - chr3L 16384553 intron CG4729 - chr3L 16384616 intron CG4729 - chr3L_4_16380001 chr3L_16380001 RAL-409_125b 1862 chr3L 16384514 16384526 chr3L 16384598 16384615 4 86 6.5 8.5 7.5 0.5 101 chr3L 16384514 intron CG4729 - chr3L 16384564 intron CG4729 - chr3L 16384615 intron CG4729 - chr3L_4_16380001 chr3L_16380001 RAL-409_125b 1863 chr3L 16443801 16443873 chr3L 16446192 16446263 Doc 9 2388 4.0 7.5 5.8 1.3 2462 chr3L 16443801 intron,intron CG33158 +,dsx-c73A - chr3L 16445032 intron,intron CG33158 +,dsx-c73A - chr3L 16446263 intron,intron CG33158 +,dsx-c73A - chr3L_9_16445001 chr3L_16445001 RAL-409_125b 1864 chr3L 16450004 16450042 chr3L 16450139 16450150 12 131 3.0 5.5 4.2 2.3 146 chr3L 16450004 intron,intron CG33158 +,dsx-c73A - chr3L 16450077 intron,intron CG33158 +,dsx-c73A - chr3L 16450150 intron,exon CG33158 +,dsx-c73A - chr3L_12_16450001 chr3L_16450001 RAL-409_125b 1865 chr3L 16457490 16457534 chr3L 16457635 16457678 9 144 3.5 3.0 3.2 2.1 188 chr3L 16457490 intron CG33158 + chr3L 16457584 intron CG33158 + chr3L 16457678 intron CG33158 + chr3L_9_16455001 chr3L_16455001 RAL-409_125b 1866 chr3L 16458222 16458286 chr3L 16458385 16458450 4 162 7.0 2.5 4.8 0.7 228 chr3L 16458222 intron CG33158 + chr3L 16458336 intron CG33158 + chr3L 16458450 intron CG33158 + chr3L_4_16455001 chr3L_16455001 RAL-409_125b 1867 chr3L 16458713 16458767 chr3L 16458843 16458890 6 126 7.5 3.0 5.2 1.0 177 chr3L 16458713 intron CG33158 + chr3L 16458802 intron CG33158 + chr3L 16458890 intron CG33158 + chr3L_6_16455001 chr3L_16455001 RAL-409_125b 1868 chr3L 16493939 16494002 chr3L 16494506 16494569 jockey 17 562 7.5 9.0 8.2 1.8 630 chr3L 16493939 intron,exon,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494254 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494569 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_17_16490001 chr3L_16490001 RAL-409_125b 1869 chr3L 16539909 16540085 chr3L 16540057 16540207 10 139 6.0 12.0 9.0 1.0 298 chr3L 16539909 intron CG43373 - chr3L 16540058 intron CG43373 - chr3L 16540207 intron CG43373 - chr3L_10_16540001 chr3L_16540001 RAL-409_125b 1870 chr3L 16563182 16563204 chr3L 16563313 16563335 4 127 8.5 3.5 6.0 0.6 153 chr3L 16563182 intergenic Mipp1 - chr3L 16563258 intergenic Mipp1 - chr3L 16563335 intergenic Mipp1 - chr3L_4_16560001 chr3L_16560001 RAL-409_125b 1871 chr3L 16610640 16610699 chr3L 16610775 16610833 10 133 3.5 7.0 5.2 1.6 193 chr3L 16610640 intergenic Su(P) -,Prosbeta6 - chr3L 16610736 3` UTR Su(P) - chr3L 16610833 intron Su(P) - chr3L_10_16610001 chr3L_16610001 RAL-409_125b 1872 chr3L 16616472 16616535 chr3L 16621843 16621913 297 15 5372 6.0 6.0 6.0 2.1 5441 chr3L 16616472 3` UTR Abl - chr3L 16619192 3` UTR Abl - chr3L 16621913 3` UTR Abl - chr3L_15_16615001 chr3L_16615001 RAL-409_125b 1873 chr3L 16632216 16632261 chr3L 16632432 16632470 6 219 3.5 1.0 2.2 1.9 254 chr3L 16632216 intron Abl - chr3L 16632343 intron Abl - chr3L 16632470 intron Abl - chr3L_6_16630001 chr3L_16630001 RAL-409_125b 1874 chr3L 16652653 16652701 chr3L 16652782 16652830 5 129 24.0 22.5 23.2 0.2 177 chr3L 16652653 intron Baldspot - chr3L 16652742 intron Baldspot - chr3L 16652830 intron Baldspot - chr3L_5_16650001 chr3L_16650001 RAL-409_125b 1875 chr3L 16683984 16684037 chr3L 16689255 16689308 copia 4 5270 4.0 3.0 3.5 0.9 5324 chr3L 16683984 intron,intron Lasp -,CG43954 - chr3L 16686646 intron,intron Lasp -,CG43954 - chr3L 16689308 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_4_16685001 chr3L_16685001 RAL-409_125b 1876 chr3L 16749168 16749212 chr3L 16749279 16749332 8 120 10.5 6.0 8.2 0.9 164 chr3L 16749168 intergenic not near genes chr3L 16749250 intergenic not near genes chr3L 16749332 intergenic not near genes chr3L_8_16745001 chr3L_16745001 RAL-409_125b 1877 chr3L 16757606 16757666 chr3L 16757746 16757806 8 140 6.0 3.5 4.8 1.4 200 chr3L 16757606 intergenic not near genes chr3L 16757706 intergenic not near genes chr3L 16757806 intergenic not near genes chr3L_8_16755001 chr3L_16755001 RAL-409_125b 1878 chr3L 16772475 16772503 chr3L 16772584 16772643 11 134 11.0 5.0 8.0 1.2 168 chr3L 16772475 intron Nrt + chr3L 16772559 intron Nrt + chr3L 16772643 intron Nrt + chr3L_11_16770001 chr3L_16770001 RAL-409_125b 1879 chr3L 16782454 16782524 chr3L 16782583 16782653 7 127 5.0 5.0 5.0 1.2 199 chr3L 16782454 intergenic CG9705 + chr3L 16782554 intergenic CG9705 +,CG9706 + chr3L 16782653 intergenic CG9705 +,CG9706 + chr3L_7_16780001 chr3L_16780001 RAL-409_125b 1880 chr3L 16804980 16804991 chr3L 16805145 16805156 7 164 11.5 3.0 7.2 0.9 176 chr3L 16804980 intron CG9674 - chr3L 16805068 intron,5` UTR CG9674 -,nudC + chr3L 16805156 intron,5` UTR CG9674 -,nudC + chr3L_7_16805001 chr3L_16805001 RAL-409_125b 1881 chr3L 16804996 16805043 chr3L 16805133 16805207 17 159 7.0 2.0 4.5 3.1 211 chr3L 16804996 intron,5` UTR CG9674 -,nudC + chr3L 16805102 intron,5` UTR CG9674 -,nudC + chr3L 16805207 intron,5` UTR CG9674 -,nudC + chr3L_17_16805001 chr3L_16805001 RAL-409_125b 1882 chr3L 16807993 16808070 chr3L 16808119 16808199 6 127 3.5 3.0 3.2 1.4 206 chr3L 16807993 intron nudC + chr3L 16808096 intron nudC + chr3L 16808199 intron nudC + chr3L_6_16805001 chr3L_16805001 RAL-409_125b 1883 chr3L 16818702 16818775 chr3L 16818827 16818882 27 122 6.5 5.5 6.0 3.9 180 chr3L 16818702 intron,intron nudC +,CG13024 - chr3L 16818792 intron,intron nudC +,CG13024 - chr3L 16818882 intron,intron nudC +,CG13024 - chr3L_27_16815001 chr3L_16815001 RAL-409_125b 1884 chr3L 16826735 16826789 chr3L 16826856 16826925 10 135 8.5 3.5 6.0 1.4 190 chr3L 16826735 intron CG13024 - chr3L 16826830 intron CG13024 - chr3L 16826925 intron CG13024 - chr3L_10_16825001 chr3L_16825001 RAL-409_125b 1885 chr3L 16830727 16830785 chr3L 16830859 16830917 15 131 6.0 2.5 4.2 2.9 190 chr3L 16830727 intergenic not near genes chr3L 16830822 intergenic not near genes chr3L 16830917 intergenic not near genes chr3L_15_16830001 chr3L_16830001 RAL-409_125b 1886 chr3L 16844978 16845042 chr3L 16845141 16845205 13 161 2.5 4.5 3.5 2.9 227 chr3L 16844978 5` UTR CG9669 - chr3L 16845092 intergenic CG9669 -,CG9715 + chr3L 16845205 intergenic CG9715 +,CG9669 - chr3L_13_16845001 chr3L_16845001 RAL-409_125b 1887 chr3L 16860982 16861053 chr3L 16861132 16861205 15 148 6.0 7.5 6.8 1.9 223 chr3L 16860982 intron,exon Rh4 -,CG13029 + chr3L 16861094 intron,intron Rh4 -,CG13029 + chr3L 16861205 intron,exon Rh4 -,CG13029 + chr3L_15_16860001 chr3L_16860001 RAL-409_125b 1888 chr3L 16867502 16867569 chr3L 16867630 16867697 5 127 4.0 4.5 4.2 1.0 195 chr3L 16867502 intron Lmpt + chr3L 16867600 intron Lmpt + chr3L 16867697 intron Lmpt + chr3L_5_16865001 chr3L_16865001 RAL-409_125b 1889 chr3L 16886308 16886329 chr3L 16886443 16886480 4 147 9.0 6.0 7.5 0.5 172 chr3L 16886308 intron Lmpt + chr3L 16886394 intron Lmpt + chr3L 16886480 intron Lmpt + chr3L_4_16885001 chr3L_16885001 RAL-409_125b 1890 chr3L 16945710 16945720 chr3L 16954893 16954918 roo 4 9187 6.5 7.5 7.0 0.5 9208 chr3L 16945710 exon Obp73a + chr3L 16950314 intergenic not near genes chr3L 16954918 5` UTR Nc73EF + chr3L_4_16950001 chr3L_16950001 RAL-409_125b 1891 chr3L 16945723 16945754 chr3L 16954891 16954901 roo 7 9174 4.0 7.5 5.8 1.0 9178 chr3L 16945723 exon Obp73a + chr3L 16950312 intergenic not near genes chr3L 16954901 5` UTR Nc73EF + chr3L_7_16950001 chr3L_16950001 RAL-409_125b 1892 chr3L 17027155 17027177 chr3L 17027297 17027313 7 140 2.0 6.0 4.0 1.4 158 chr3L 17027155 intergenic Fit2 +,CG7730 + chr3L 17027234 intergenic Fit2 +,CG7730 + chr3L 17027313 intergenic Fit2 +,CG7730 + chr3L_7_17025001 chr3L_17025001 RAL-409_125b 1893 chr3L 17034914 17034944 chr3L 17035136 17035176 G2 7 234 3.5 5.0 4.2 1.3 262 chr3L 17034914 intergenic not near genes chr3L 17035045 intergenic not near genes chr3L 17035176 intergenic beg + chr3L_7_17035001 chr3L_17035001 RAL-409_125b 1894 chr3L 17084966 17085015 chr3L 17094154 17094214 roo 13 9196 8.0 7.5 7.8 1.5 9248 chr3L 17084966 intron Rbp6 - chr3L 17089590 intron Rbp6 - chr3L 17094214 intron Rbp6 - chr3L_13_17085001 chr3L_17085001 RAL-409_125b 1895 chr3L 17103079 17103128 chr3L 17103206 17103220 7 113 5.5 3.5 4.5 1.3 141 chr3L 17103079 intron Rbp6 - chr3L 17103150 intron Rbp6 - chr3L 17103220 intron Rbp6 - chr3L_7_17100001 chr3L_17100001 RAL-409_125b 1896 chr3L 17149117 17149164 chr3L 17149248 17149259 10 127 6.5 0.0 3.2 2.4 142 chr3L 17149117 intron Rbp6 - chr3L 17149188 intron Rbp6 - chr3L 17149259 intron Rbp6 - chr3L_10_17145001 chr3L_17145001 RAL-409_125b 1897 chr3L 17272255 17272261 chr3L 17272377 17272444 4 159 4.5 4.0 4.2 0.8 189 chr3L 17272255 intergenic not near genes chr3L 17272350 intergenic not near genes chr3L 17272444 intergenic not near genes chr3L_4_17270001 chr3L_17270001 RAL-409_125b 1898 chr3L 17313091 17313156 chr3L 17313219 17313289 10 132 7.0 4.5 5.8 1.5 198 chr3L 17313091 intergenic not near genes chr3L 17313190 intergenic not near genes chr3L 17313289 intergenic not near genes chr3L_10_17310001 chr3L_17310001 RAL-409_125b 1899 chr3L 17344586 17344652 chr3L 17344719 17344785 10 130 5.5 4.0 4.8 1.7 199 chr3L 17344586 exon brv2 - chr3L 17344686 5` UTR brv2 - chr3L 17344785 intergenic brv2 -,Mip - chr3L_10_17340001 chr3L_17340001 RAL-409_125b 1900 chr3L 17430466 17430494 chr3L 17430553 17430600 7 101 7.5 8.5 8.0 0.8 134 chr3L 17430466 intron,3` UTR CG32174 -,frc - chr3L 17430533 intron,3` UTR CG32174 -,frc - chr3L 17430600 intron,3` UTR CG32174 -,frc - chr3L_7_17430001 chr3L_17430001 RAL-409_125b 1901 chr3L 17461069 17461117 chr3L 17461205 17461243 8 132 5.0 5.0 5.0 1.3 174 chr3L 17461069 intergenic not near genes chr3L 17461156 intergenic not near genes chr3L 17461243 intergenic not near genes chr3L_8_17460001 chr3L_17460001 RAL-409_125b 1902 chr3L 17492438 17492509 chr3L 17492792 17492853 15 353 6.5 3.0 4.8 2.6 415 chr3L 17492438 intron Oatp74D + chr3L 17492646 intron Oatp74D + chr3L 17492853 intron Oatp74D + chr3L_15_17490001 chr3L_17490001 RAL-409_125b 1903 chr3L 17510699 17510760 chr3L 17510833 17510859 11 127 3.5 3.0 3.2 2.6 160 chr3L 17510699 exon Oatp74D + chr3L 17510779 intron Oatp74D + chr3L 17510859 intron Oatp74D + chr3L_11_17510001 chr3L_17510001 RAL-409_125b 1904 chr3L 17516936 17516953 chr3L 17524544 17524561 412 5 7605 12.0 6.0 9.0 0.5 7625 chr3L 17516936 intron CG7564 + chr3L 17520748 intron CG7564 + chr3L 17524561 3` UTR CG7564 + chr3L_5_17520001 chr3L_17520001 RAL-409_125b 1905 chr3L 17516960 17516984 chr3L 17524538 17524571 412 9 7589 8.5 5.5 7.0 1.1 7611 chr3L 17516960 intron CG7564 + chr3L 17520766 intron CG7564 + chr3L 17524571 3` UTR CG7564 + chr3L_9_17520001 chr3L_17520001 RAL-409_125b 1906 chr3L 17536571 17536603 chr3L 17536674 17536709 13 111 7.5 7.0 7.2 1.6 138 chr3L 17536571 intron Nedd4 + chr3L 17536640 intron Nedd4 + chr3L 17536709 intron Nedd4 + chr3L_13_17535001 chr3L_17535001 RAL-409_125b 1907 chr3L 17592757 17592808 chr3L 17592898 17592949 4 141 6.5 8.5 7.5 0.5 192 chr3L 17592757 intron Eip74EF - chr3L 17592853 intron Eip74EF - chr3L 17592949 intron Eip74EF - chr3L_4_17590001 chr3L_17590001 RAL-409_125b 1908 chr3L 17612184 17612243 chr3L 17612303 17612367 14 120 4.0 4.5 4.2 2.7 183 chr3L 17612184 intron Eip74EF - chr3L 17612276 intron Eip74EF - chr3L 17612367 intron Eip74EF - chr3L_14_17610001 chr3L_17610001 RAL-409_125b 1909 chr3L 17730825 17730875 chr3L 17738205 17738205 mdg1 4 7368 20.0 9.0 14.5 0.3 7380 chr3L 17730825 intron Ccn + chr3L 17734515 intron Ccn + chr3L 17738205 intron Ccn + chr3L_4_17730001 chr3L_17730001 RAL-409_125b 1910 chr3L 17789799 17789877 chr3L 17789925 17790003 11 125 7.0 6.5 6.8 1.4 204 chr3L 17789799 intergenic not near genes chr3L 17789901 intergenic not near genes chr3L 17790003 intergenic not near genes chr3L_11_17785001 chr3L_17785001 RAL-409_125b 1911 chr3L 17790570 17790632 chr3L 17790885 17790947 13 312 2.0 7.0 4.5 2.4 377 chr3L 17790570 intergenic not near genes chr3L 17790758 intergenic CG42815 - chr3L 17790947 intergenic CG42815 - chr3L_13_17790001 chr3L_17790001 RAL-409_125b 1912 chr3L 17799765 17799827 chr3L 17801602 17801652 S-element 13 1834 5.0 6.0 5.5 2.0 1887 chr3L 17799765 intron NUCB1 - chr3L 17800708 intron NUCB1 - chr3L 17801652 intron NUCB1 - chr3L_13_17800001 chr3L_17800001 RAL-409_125b 1913 chr3L 17884654 17884708 chr3L 17884799 17884857 5 149 6.0 1.5 3.8 1.0 203 chr3L 17884654 intergenic CG5506 - chr3L 17884756 intergenic CG5506 - chr3L 17884857 intergenic CG5506 - chr3L_5_17880001 chr3L_17880001 RAL-409_125b 1914 chr3L 17887826 17887873 chr3L 17887962 17888008 7 135 3.0 7.0 5.0 1.2 182 chr3L 17887826 intron CG7402 + chr3L 17887917 intron CG7402 + chr3L 17888008 intron CG7402 + chr3L_7_17885001 chr3L_17885001 RAL-409_125b 1915 chr3L 17918347 17918396 chr3L 17921200 17921249 opus 4 2853 2.0 7.5 4.8 0.7 2902 chr3L 17918347 intergenic not near genes chr3L 17919798 intergenic not near genes chr3L 17921249 intergenic not near genes chr3L_4_17915001 chr3L_17915001 RAL-409_125b 1916 chr3L 18006219 18006255 chr3L 18006393 18006401 6 168 2.5 6.0 4.2 1.2 182 chr3L 18006219 intron Eip75B - chr3L 18006310 intron Eip75B - chr3L 18006401 intron Eip75B - chr3L_6_18005001 chr3L_18005001 RAL-409_125b 1917 chr3L 18034646 18034703 chr3L 18034779 18034836 7 129 11.0 13.5 12.2 0.5 190 chr3L 18034646 intron Eip75B - chr3L 18034741 intron Eip75B - chr3L 18034836 intron Eip75B - chr3L_7_18030001 chr3L_18030001 RAL-409_125b 1918 chr3L 18047690 18047728 chr3L 18056797 18056835 roo 6 9105 9.0 7.5 8.2 0.7 9145 chr3L 18047690 intron Eip75B - chr3L 18052262 intron Eip75B - chr3L 18056835 intron Eip75B - chr3L_6_18050001 chr3L_18050001 RAL-409_125b 1919 chr3L 18077105 18077141 chr3L 18077250 18077286 4 145 9.5 8.5 9.0 0.4 181 chr3L 18077105 intergenic CR45392 + chr3L 18077196 intergenic CR45392 + chr3L 18077286 intergenic CR45392 + chr3L_4_18075001 chr3L_18075001 RAL-409_125b 1920 chr3L 18092085 18092143 chr3L 18092217 18092275 6 132 0.0 2.0 1.0 3.0 190 chr3L 18092085 intron CG13698 - chr3L 18092180 intron CG13698 - chr3L 18092275 intron CG13698 - chr3L_6_18090001 chr3L_18090001 RAL-409_125b 1921 chr3L 18106209 18106233 chr3L 18106378 18106382 7 163 12.5 0.5 6.5 0.9 173 chr3L 18106209 intergenic CG13698 -,mRpS26 + chr3L 18106296 intergenic CG13698 -,mRpS26 + chr3L 18106382 intergenic mRpS26 +,CG13698 - chr3L_7_18105001 chr3L_18105001 RAL-409_125b 1922 chr3L 18107581 18107638 chr3L 18107719 18107781 14 139 8.5 7.5 8.0 1.6 200 chr3L 18107581 intergenic mRpS26 +,CG5147 - chr3L 18107681 intergenic CG5147 -,mRpS26 + chr3L 18107781 intergenic CG5147 -,mRpS26 + chr3L_14_18105001 chr3L_18105001 RAL-409_125b 1923 chr3L 18124384 18124427 chr3L 18124518 18124561 8 134 3.0 4.0 3.5 1.8 177 chr3L 18124384 intergenic not near genes chr3L 18124472 intergenic not near genes chr3L 18124561 intergenic not near genes chr3L_8_18120001 chr3L_18120001 RAL-409_125b 1924 chr3L 18172643 18172704 chr3L 18172769 18172830 12 126 6.0 5.0 5.5 1.8 187 chr3L 18172643 intron W - chr3L 18172736 intron W - chr3L 18172830 intron W - chr3L_12_18170001 chr3L_18170001 RAL-409_125b 1925 chr3L 18175778 18175828 chr3L 18176060 18176117 14 287 4.0 3.5 3.8 2.9 339 chr3L 18175778 intron W - chr3L 18175948 intron W - chr3L 18176117 intron W - chr3L_14_18175001 chr3L_18175001 RAL-409_125b 1926 chr3L 18203555 18203605 chr3L 18203700 18203738 9 136 3.5 0.0 1.8 3.2 183 chr3L 18203555 exon CG7320 + chr3L 18203646 intergenic CG7320 + chr3L 18203738 intergenic CG7320 + chr3L_9_18200001 chr3L_18200001 RAL-409_125b 1927 chr3L 18240094 18240118 chr3L 18240247 18240271 8 152 7.5 0.0 3.8 1.7 177 chr3L 18240094 intergenic not near genes chr3L 18240182 intergenic not near genes chr3L 18240271 intergenic not near genes chr3L_8_18240001 chr3L_18240001 RAL-409_125b 1928 chr3L 18258805 18258879 chr3L 18258981 18259055 12 174 7.5 4.0 5.8 1.8 250 chr3L 18258805 intergenic not near genes chr3L 18258930 intergenic not near genes chr3L 18259055 intergenic not near genes chr3L_12_18255001 chr3L_18255001 RAL-409_125b 1929 chr3L 18262435 18262476 chr3L 18262558 18262604 8 131 4.0 1.5 2.8 2.1 169 chr3L 18262435 intergenic not near genes chr3L 18262520 intergenic not near genes chr3L 18262604 intergenic not near genes chr3L_8_18260001 chr3L_18260001 RAL-409_125b 1930 chr3L 18301306 18301376 chr3L 18301444 18301515 9 137 0.5 4.5 2.5 2.6 209 chr3L 18301306 intergenic CG13700 - chr3L 18301410 intergenic CG13700 - chr3L 18301515 intergenic CG13700 - chr3L_9_18300001 chr3L_18300001 RAL-409_125b 1931 chr3L 18343511 18343527 chr3L 18343664 18343679 4 154 3.0 3.5 3.2 1.0 168 chr3L 18343511 intergenic not near genes chr3L 18343595 intergenic not near genes chr3L 18343679 intergenic not near genes chr3L_4_18340001 chr3L_18340001 RAL-409_125b 1932 chr3L 18383049 18383117 chr3L 18383183 18383249 7 131 7.0 4.5 5.8 1.0 200 chr3L 18383049 intergenic not near genes chr3L 18383149 intergenic not near genes chr3L 18383249 intergenic not near genes chr3L_7_18380001 chr3L_18380001 RAL-409_125b 1933 chr3L 18406094 18406154 chr3L 18406220 18406280 9 125 1.0 3.0 2.0 3.0 186 chr3L 18406094 intergenic not near genes chr3L 18406187 intergenic not near genes chr3L 18406280 intergenic not near genes chr3L_9_18405001 chr3L_18405001 RAL-409_125b 1934 chr3L 18408688 18408751 chr3L 18408824 18408887 17 134 4.0 3.5 3.8 3.5 199 chr3L 18408688 intergenic not near genes chr3L 18408788 intergenic not near genes chr3L 18408887 intergenic not near genes chr3L_17_18405001 chr3L_18405001 RAL-409_125b 1935 chr3L 18445203 18445280 chr3L 18445331 18445368 20 116 5.5 6.0 5.8 2.9 165 chr3L 18445203 intergenic not near genes chr3L 18445286 intergenic not near genes chr3L 18445368 intergenic not near genes chr3L_20_18445001 chr3L_18445001 RAL-409_125b 1936 chr3L 18448572 18448611 chr3L 18448714 18448753 10 140 2.5 3.5 3.0 2.5 181 chr3L 18448572 intergenic not near genes chr3L 18448662 intergenic not near genes chr3L 18448753 intergenic not near genes chr3L_10_18445001 chr3L_18445001 RAL-409_125b 1937 chr3L 18456231 18456282 chr3L 18456363 18456415 14 137 8.0 5.0 6.5 1.9 184 chr3L 18456231 intergenic CR44670 - chr3L 18456323 intergenic CR44670 - chr3L 18456415 3` UTR CR44670 - chr3L_14_18455001 chr3L_18455001 RAL-409_125b 1938 chr3L 18457338 18457382 chr3L 18457471 18457554 12 163 5.0 3.5 4.2 2.3 216 chr3L 18457338 3` UTR CR44671 - chr3L 18457446 3` UTR CR44671 - chr3L 18457554 intergenic CR44671 - chr3L_12_18455001 chr3L_18455001 RAL-409_125b 1939 chr3L 18464461 18464509 chr3L 18464574 18464645 9 117 7.0 9.0 8.0 1.0 184 chr3L 18464461 intergenic not near genes chr3L 18464553 intergenic not near genes chr3L 18464645 intergenic not near genes chr3L_9_18460001 chr3L_18460001 RAL-409_125b 1940 chr3L 18506103 18506145 chr3L 18509616 18509658 F-element 6 3511 8.5 6.0 7.2 0.7 3555 chr3L 18506103 intergenic not near genes chr3L 18507880 intergenic not near genes chr3L 18509658 intergenic not near genes chr3L_6_18505001 chr3L_18505001 RAL-409_125b 1941 chr3L 18528608 18528651 chr3L 18537819 18537885 roo 10 9227 5.0 0.0 2.5 2.9 9277 chr3L 18528608 intergenic not near genes chr3L 18533246 intergenic not near genes chr3L 18537885 intergenic not near genes chr3L_10_18530001 chr3L_18530001 RAL-409_125b 1942 chr3L 18546658 18546730 chr3L 18546801 18546872 16 140 5.5 8.5 7.0 2.0 214 chr3L 18546658 intergenic not near genes chr3L 18546765 intergenic not near genes chr3L 18546872 intergenic not near genes chr3L_16_18545001 chr3L_18545001 RAL-409_125b 1943 chr3L 18549791 18549831 chr3L 18549932 18549984 7 148 0.0 0.5 0.2 5.8 193 chr3L 18549791 intergenic not near genes chr3L 18549888 intergenic not near genes chr3L 18549984 intergenic not near genes chr3L_7_18545001 chr3L_18545001 RAL-409_125b 1944 chr3L 18570734 18570803 chr3L 18570927 18570996 11 189 3.5 3.5 3.5 2.4 262 chr3L 18570734 intron AstC-R1 + chr3L 18570865 intron AstC-R1 + chr3L 18570996 intron AstC-R1 + chr3L_11_18570001 chr3L_18570001 RAL-409_125b 1945 chr3L 18581296 18581354 chr3L 18581423 18581463 13 120 5.5 8.5 7.0 1.6 167 chr3L 18581296 intergenic not near genes chr3L 18581380 intergenic not near genes chr3L 18581463 intergenic not near genes chr3L_13_18580001 chr3L_18580001 RAL-409_125b 1946 chr3L 18593916 18593977 chr3L 18595946 18596010 Doc 16 2030 9.0 5.5 7.2 2.0 2094 chr3L 18593916 intergenic term - chr3L 18594963 intergenic not near genes chr3L 18596010 intergenic CR45389 + chr3L_16_18590001 chr3L_18590001 RAL-409_125b 1947 chr3L 18634580 18634651 chr3L 18634714 18634767 14 130 4.0 4.0 4.0 2.8 187 chr3L 18634580 intron MYPT-75D + chr3L 18634674 intron MYPT-75D + chr3L 18634767 intron MYPT-75D + chr3L_14_18630001 chr3L_18630001 RAL-409_125b 1948 chr3L 18649599 18649657 chr3L 18650011 18650066 15 405 2.5 8.0 5.2 2.4 467 chr3L 18649599 intron MYPT-75D + chr3L 18649832 intron MYPT-75D + chr3L 18650066 intron MYPT-75D + chr3L_15_18645001 chr3L_18645001 RAL-409_125b 1949 chr3L 18679647 18679687 chr3L 18679793 18679843 9 146 7.5 10.0 8.8 0.9 196 chr3L 18679647 intergenic not near genes chr3L 18679745 intergenic not near genes chr3L 18679843 intergenic not near genes chr3L_9_18675001 chr3L_18675001 RAL-409_125b 1950 chr3L 18710720 18710781 chr3L 18718714 18718783 Stalker2 17 7999 6.5 7.5 7.0 2.1 8063 chr3L 18710720 intergenic not near genes chr3L 18714752 intergenic not near genes chr3L 18718783 intergenic not near genes chr3L_17_18710001 chr3L_18710001 RAL-409_125b 1951 chr3L 18721723 18721787 chr3L 18721864 18721921 13 137 2.5 2.5 2.5 3.7 198 chr3L 18721723 intergenic CG12477 - chr3L 18721822 intergenic CG12477 - chr3L 18721921 3` UTR CG12477 - chr3L_13_18720001 chr3L_18720001 RAL-409_125b 1952 chr3L 18761906 18761970 chr3L 18762044 18762108 13 129 5.5 4.5 5.0 2.2 202 chr3L 18761906 intron ftz-f1 - chr3L 18762007 intron ftz-f1 - chr3L 18762108 intron ftz-f1 - chr3L_13_18760001 chr3L_18760001 RAL-409_125b 1953 chr3L 18770607 18770674 chr3L 18770742 18770804 11 134 3.5 5.5 4.5 2.0 197 chr3L 18770607 intron ftz-f1 - chr3L 18770706 intron ftz-f1 - chr3L 18770804 intron ftz-f1 - chr3L_11_18770001 chr3L_18770001 RAL-409_125b 1954 chr3L 18772367 18772431 chr3L 18781098 18781157 roo 14 8731 8.0 8.0 8.0 1.6 8790 chr3L 18772367 intron ftz-f1 - chr3L 18776762 intron ftz-f1 - chr3L 18781157 intron ftz-f1 - chr3L_14_18775001 chr3L_18775001 RAL-409_125b 1955 chr3L 18792535 18792598 chr3L 18792657 18792718 15 130 4.0 8.0 6.0 2.1 183 chr3L 18792535 intron ftz-f1 - chr3L 18792626 intron ftz-f1 - chr3L 18792718 intron ftz-f1 - chr3L_15_18790001 chr3L_18790001 RAL-409_125b 1956 chr3L 18810104 18810172 chr3L 18810231 18810299 6 124 6.0 6.0 6.0 0.9 195 chr3L 18810104 intron CG14073 - chr3L 18810202 intron CG14073 - chr3L 18810299 intron CG14073 - chr3L_6_18810001 chr3L_18810001 RAL-409_125b 1957 chr3L 18832577 18832628 chr3L 18832705 18832756 11 124 9.0 10.0 9.5 1.0 179 chr3L 18832577 intron Indy - chr3L 18832666 intron Indy - chr3L 18832756 intron Indy - chr3L_11_18830001 chr3L_18830001 RAL-409_125b 1958 chr3L 18833744 18833794 chr3L 18834958 18835008 1360 11 1213 6.5 5.5 6.0 1.6 1264 chr3L 18833744 intron Indy - chr3L 18834376 intron Indy - chr3L 18835008 intron Indy - chr3L_11_18830001 chr3L_18830001 RAL-409_125b 1959 chr3L 18885955 18886013 chr3L 18886081 18886139 11 125 1.0 6.5 3.8 2.3 184 chr3L 18885955 intron CG3961 - chr3L 18886047 intron CG3961 - chr3L 18886139 intron CG3961 - chr3L_11_18885001 chr3L_18885001 RAL-409_125b 1960 chr3L 18924432 18924507 chr3L 18924558 18924633 10 126 2.5 2.0 2.2 3.1 201 chr3L 18924432 intron CG32204 - chr3L 18924532 intron CG32204 - chr3L 18924633 intron CG32204 - chr3L_10_18920001 chr3L_18920001 RAL-409_125b 1961 chr3L 18928269 18928340 chr3L 18928406 18928472 18 131 6.5 8.0 7.2 2.2 203 chr3L 18928269 intron CG32204 - chr3L 18928370 intron CG32204 - chr3L 18928472 intron CG32204 - chr3L_18_18925001 chr3L_18925001 RAL-409_125b 1962 chr3L 18932231 18932306 chr3L 18932387 18932456 11 151 3.5 6.0 4.8 1.9 225 chr3L 18932231 intron CG32204 - chr3L 18932344 intron CG32204 - chr3L 18932456 intron CG32204 - chr3L_11_18930001 chr3L_18930001 RAL-409_125b 1963 chr3L 18933594 18933657 chr3L 18933724 18933795 9 140 4.5 5.0 4.8 1.6 201 chr3L 18933594 intron CG32204 - chr3L 18933694 intron CG32204 - chr3L 18933795 intron CG32204 - chr3L_9_18930001 chr3L_18930001 RAL-409_125b 1964 chr3L 18935788 18935854 chr3L 18935927 18935993 15 137 5.0 8.0 6.5 2.0 205 chr3L 18935788 intron CG32204 - chr3L 18935890 intron CG32204 - chr3L 18935993 intron CG32204 - chr3L_15_18935001 chr3L_18935001 RAL-409_125b 1965 chr3L 18941136 18941198 chr3L 18941297 18941318 10 154 4.5 4.5 4.5 1.8 182 chr3L 18941136 intron CG32204 - chr3L 18941227 intron CG32204 - chr3L 18941318 intron CG32204 - chr3L_10_18940001 chr3L_18940001 RAL-409_125b 1966 chr3L 18972362 18972421 chr3L 18972475 18972517 6 112 9.5 6.5 8.0 0.7 155 chr3L 18972362 intergenic not near genes chr3L 18972440 intergenic not near genes chr3L 18972517 intergenic not near genes chr3L_6_18970001 chr3L_18970001 RAL-409_125b 1967 chr3L 19008829 19008842 chr3L 19009194 19009219 jockey 4 377 7.5 9.0 8.2 0.4 390 chr3L 19008829 intron nkd - chr3L 19009024 intron nkd - chr3L 19009219 intron nkd - chr3L_4_19005001 chr3L_19005001 RAL-409_125b 1968 chr3L 19015144 19015188 chr3L 19015277 19015319 11 131 1.5 8.0 4.8 1.9 175 chr3L 19015144 intron nkd - chr3L 19015232 intron nkd - chr3L 19015319 intron nkd - chr3L_11_19015001 chr3L_19015001 RAL-409_125b 1969 chr3L 19111395 19111404 chr3L 19111495 19111539 4 122 6.0 6.5 6.2 0.6 144 chr3L 19111395 intron CG14082 - chr3L 19111467 intron CG14082 - chr3L 19111539 intron CG14082 - chr3L_4_19110001 chr3L_19110001 RAL-409_125b 1970 chr3L 19115602 19115662 chr3L 19115822 19115886 BS 14 223 5.5 4.0 4.8 2.4 284 chr3L 19115602 intron CG14082 - chr3L 19115744 intron CG14082 - chr3L 19115886 intron CG14082 - chr3L_14_19115001 chr3L_19115001 RAL-409_125b 1971 chr3L 19117014 19117064 chr3L 19124493 19124546 mdg1 17 7482 8.0 6.5 7.2 2.1 7532 chr3L 19117014 intron CG14082 - chr3L 19120780 intron CG14082 - chr3L 19124546 intron CG14082 - chr3L_17_19120001 chr3L_19120001 RAL-409_125b 1972 chr3L 19138108 19138157 chr3L 19138240 19138301 8 134 0.5 5.5 3.0 2.0 193 chr3L 19138108 intron CG14082 - chr3L 19138204 intron CG14082 - chr3L 19138301 intron CG14082 - chr3L_8_19135001 chr3L_19135001 RAL-409_125b 1973 chr3L 19182338 19182395 chr3L 19182470 19182526 15 127 7.0 5.0 6.0 2.1 188 chr3L 19182338 intron fz2 - chr3L 19182432 intron fz2 - chr3L 19182526 intron fz2 - chr3L_15_19180001 chr3L_19180001 RAL-409_125b 1974 chr3L 19208020 19208063 chr3L 19209442 19209487 Doc 6 1420 6.0 3.0 4.5 1.1 1467 chr3L 19208020 intron fz2 - chr3L 19208754 intron fz2 - chr3L 19209487 intron fz2 - chr3L_6_19205001 chr3L_19205001 RAL-409_125b 1975 chr3L 19208071 19208089 chr3L 19209430 19209473 Doc 5 1393 3.5 1.5 2.5 1.4 1402 chr3L 19208071 intron fz2 - chr3L 19208772 intron fz2 - chr3L 19209473 intron fz2 - chr3L_5_19205001 chr3L_19205001 RAL-409_125b 1976 chr3L 19216483 19216535 chr3L 19216610 19216662 4 126 6.0 7.0 6.5 0.5 179 chr3L 19216483 intron fz2 - chr3L 19216572 intron fz2 - chr3L 19216662 intron fz2 - chr3L_4_19215001 chr3L_19215001 RAL-409_125b 1977 chr3L 19220633 19220633 chr3L 22908066 22908067 7 3687433 18.0 15.0 16.5 0.4 3687434 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_7_21060001 chr3L_21060001 RAL-409_125b 1978 chr3L 19220634 19220634 chr3L 22908066 22908066 7 3687432 18.0 15.0 16.5 0.4 3687432 chr3L 19220634 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_7_21060001 chr3L_21060001 RAL-409_125b 1979 chr3L 19220635 19220635 chr3L 22908066 22908066 4 3687431 18.0 15.0 16.5 0.2 3687431 chr3L 19220635 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_4_21060001 chr3L_21060001 RAL-409_125b 1980 chr3L 19220636 19220637 chr3L 22908066 22908066 9 3687430 18.0 15.0 16.5 0.5 3687430 chr3L 19220636 intron fz2 - chr3L 21064351 intron siz + chr3L 22908066 intergenic not near genes chr3L_9_21060001 chr3L_21060001 RAL-409_125b 1981 chr3L 19222986 19223052 chr3L 19223126 19223181 13 131 7.0 7.0 7.0 1.6 195 chr3L 19222986 intron fz2 - chr3L 19223084 intron fz2 - chr3L 19223181 intron fz2 - chr3L_13_19220001 chr3L_19220001 RAL-409_125b 1982 chr3L 19248828 19248881 chr3L 19249050 19249097 14 221 3.0 12.0 7.5 1.6 269 chr3L 19248828 intergenic not near genes chr3L 19248962 intergenic not near genes chr3L 19249097 intergenic not near genes chr3L_14_19245001 chr3L_19245001 RAL-409_125b 1983 chr3L 19253775 19253826 chr3L 19253902 19253953 10 127 7.0 4.5 5.8 1.5 178 chr3L 19253775 3` UTR mRpL21 - chr3L 19253864 3` UTR mRpL21 - chr3L 19253953 3` UTR mRpL21 - chr3L_10_19250001 chr3L_19250001 RAL-409_125b 1984 chr3L 19282236 19282287 chr3L 19282362 19282413 14 142 9.0 7.5 8.2 1.5 177 chr3L 19282236 3` UTR Gbs-76A - chr3L 19282324 3` UTR Gbs-76A - chr3L 19282413 3` UTR Gbs-76A - chr3L_14_19280001 chr3L_19280001 RAL-409_125b 1985 chr3L 19390686 19390711 chr3L 19390829 19390859 4 143 16.5 16.0 16.2 0.2 173 chr3L 19390686 intron CG32206 - chr3L 19390772 intron CG32206 - chr3L 19390859 intron CG32206 - chr3L_4_19390001 chr3L_19390001 RAL-409_125b 1986 chr3L 19417776 19417828 chr3L 19417892 19417923 7 116 5.5 2.5 4.0 1.4 147 chr3L 19417776 intergenic not near genes chr3L 19417850 intergenic not near genes chr3L 19417923 intergenic not near genes chr3L_7_19415001 chr3L_19415001 RAL-409_125b 1987 chr3L 19439159 19439289 chr3L 19439273 19439415 12 133 3.5 7.5 5.5 1.8 256 chr3L 19439159 intergenic not near genes chr3L 19439287 intergenic not near genes chr3L 19439415 intergenic not near genes chr3L_12_19435001 chr3L_19435001 RAL-409_125b 1988 chr3L 19636825 19636840 chr3L 19636977 19636992 7 150 13.0 15.5 14.2 0.5 167 chr3L 19636825 intergenic CG8786 - chr3L 19636908 intergenic CG8786 - chr3L 19636992 intergenic CG8786 - chr3L_7_19635001 chr3L_19635001 RAL-409_125b 1989 chr3L 19820253 19820315 chr3L 19827847 19827914 412 16 7599 3.5 3.5 3.5 3.6 7661 chr3L 19820253 intron Deaf1 + chr3L 19824084 intron Deaf1 + chr3L 19827914 intron Deaf1 + chr3L_16_19820001 chr3L_19820001 RAL-409_125b 1990 chr3L 19848474 19848523 chr3L 19857708 19857758 roo 10 9228 4.5 5.0 4.8 1.7 9284 chr3L 19848474 intron Papss + chr3L 19853116 intron Papss + chr3L 19857758 intron Papss + chr3L_10_19850001 chr3L_19850001 RAL-409_125b 1991 chr3L 19861792 19861848 chr3L 19863620 19863686 S-element 7 1830 7.5 3.0 5.2 1.1 1894 chr3L 19861792 5` UTR CR45433 + chr3L 19862739 intergenic not near genes chr3L 19863686 intergenic not near genes chr3L_7_19860001 chr3L_19860001 RAL-409_125b 1992 chr3L 19890460 19890493 chr3L 19890589 19890616 5 128 10.0 4.0 7.0 0.6 156 chr3L 19890460 intron,3` UTR Mi-2 -,Su(Tpl) - chr3L 19890538 intron,3` UTR Mi-2 -,Su(Tpl) - chr3L 19890616 intron,3` UTR Mi-2 -,Su(Tpl) - chr3L_5_19890001 chr3L_19890001 RAL-409_125b 1993 chr3L 19890494 19890515 chr3L 19890588 19890628 5 108 5.0 3.5 4.2 1.0 134 chr3L 19890494 intron,3` UTR Mi-2 -,Su(Tpl) - chr3L 19890561 intron,3` UTR Mi-2 -,Su(Tpl) - chr3L 19890628 intron,3` UTR Mi-2 -,Su(Tpl) - chr3L_5_19890001 chr3L_19890001 RAL-409_125b 1994 chr3L 19890520 19890532 chr3L 19890581 19890640 5 90 4.0 3.0 3.5 1.1 120 chr3L 19890520 intron,3` UTR Mi-2 -,Su(Tpl) - chr3L 19890580 intron,3` UTR Mi-2 -,Su(Tpl) - chr3L 19890640 intron,3` UTR Mi-2 -,Su(Tpl) - chr3L_5_19890001 chr3L_19890001 RAL-409_125b 1995 chr3L 19933494 19933559 chr3L 19934361 19934430 11 869 6.5 4.0 5.2 1.8 936 chr3L 19933494 intergenic CR45678 + chr3L 19933962 5` UTR CR45678 + chr3L 19934430 intergenic CR45678 + chr3L_11_19930001 chr3L_19930001 RAL-409_125b 1996 chr3L 19981159 19981232 chr3L 19981289 19981362 9 129 3.5 3.5 3.5 2.0 203 chr3L 19981159 intergenic not near genes chr3L 19981260 intergenic CG17732 + chr3L 19981362 intergenic CG17732 + chr3L_9_19980001 chr3L_19980001 RAL-409_125b 1997 chr3L 20038784 20038827 chr3L 20039012 20039050 12 227 6.5 5.5 6.0 1.7 266 chr3L 20038784 intergenic not near genes chr3L 20038917 intergenic not near genes chr3L 20039050 intergenic not near genes chr3L_12_20035001 chr3L_20035001 RAL-409_125b 1998 chr3L 20081704 20081769 chr3L 20081831 20081897 17 131 6.0 5.0 5.5 2.6 193 chr3L 20081704 intron sNPF-R - chr3L 20081800 intron sNPF-R - chr3L 20081897 intron sNPF-R - chr3L_17_20080001 chr3L_20080001 RAL-409_125b 1999 chr3L 20096223 20096283 chr3L 20096376 20096441 12 156 4.0 6.0 5.0 2.0 218 chr3L 20096223 intergenic not near genes chr3L 20096332 intergenic not near genes chr3L 20096441 intergenic not near genes chr3L_12_20095001 chr3L_20095001 RAL-409_125b 2000 chr3L 20113617 20113678 chr3L 20122924 20122985 roo 11 9306 4.0 7.5 5.8 1.6 9368 chr3L 20113617 intergenic not near genes chr3L 20118301 intergenic not near genes chr3L 20122985 intergenic not near genes chr3L_11_20115001 chr3L_20115001 RAL-409_125b 2001 chr3L 20143042 20143102 chr3L 20143172 20143194 12 127 8.5 5.0 6.8 1.5 152 chr3L 20143042 intergenic not near genes chr3L 20143118 intergenic not near genes chr3L 20143194 intergenic not near genes chr3L_12_20140001 chr3L_20140001 RAL-409_125b 2002 chr3L 20148244 20148306 chr3L 20148379 20148446 7 138 3.0 3.5 3.2 1.7 202 chr3L 20148244 intergenic not near genes chr3L 20148345 intergenic not near genes chr3L 20148446 intergenic not near genes chr3L_7_20145001 chr3L_20145001 RAL-409_125b 2003 chr3L 20212566 20212581 chr3L 20218193 20218207 mdg3 4 5627 11.5 0.0 5.8 0.6 5641 chr3L 20212566 intergenic CG7017 - chr3L 20215386 intergenic not near genes chr3L 20218207 intergenic CG6933 - chr3L_4_20215001 chr3L_20215001 RAL-409_125b 2004 chr3L 20218185 20218220 chr3L 20218351 20218386 7 165 0.0 6.5 3.2 1.7 201 chr3L 20218185 intergenic CG6933 - chr3L 20218286 intergenic CG6933 - chr3L 20218386 intergenic CG6933 - chr3L_7_20215001 chr3L_20215001 RAL-409_125b 2005 chr3L 20257287 20257359 chr3L 20258457 20258528 pogo 16 1167 4.5 6.0 5.2 2.6 1241 chr3L 20257287 intron rdgC + chr3L 20257908 intron rdgC + chr3L 20258528 intron rdgC + chr3L_16_20255001 chr3L_20255001 RAL-409_125b 2006 chr3L 20283628 20283706 chr3L 20283762 20283834 31 129 7.5 4.5 6.0 4.4 206 chr3L 20283628 intron gogo - chr3L 20283731 intron gogo - chr3L 20283834 intron gogo - chr3L_31_20280001 chr3L_20280001 RAL-409_125b 2007 chr3L 20315605 20315680 chr3L 20315735 20315796 25 119 8.0 9.0 8.5 2.6 191 chr3L 20315605 3` UTR,intron alphaSnap +,CR43875 - chr3L 20315700 3` UTR,intron alphaSnap +,CR43875 - chr3L 20315796 3` UTR,intron alphaSnap +,CR43875 - chr3L_25_20315001 chr3L_20315001 RAL-409_125b 2008 chr3L 20405545 20405600 chr3L 20405671 20405734 12 118 12.5 7.5 10.0 1.1 189 chr3L 20405545 intergenic not near genes chr3L 20405640 intergenic not near genes chr3L 20405734 intergenic not near genes chr3L_12_20405001 chr3L_20405001 RAL-409_125b 2009 chr3L 20409847 20409908 chr3L 20409983 20410011 7 125 2.5 6.0 4.2 1.3 164 chr3L 20409847 intron CG13248 - chr3L 20409929 intron CG13248 - chr3L 20410011 intron CG13248 - chr3L_7_20405001 chr3L_20405001 RAL-409_125b 2010 chr3L 20462536 20462603 chr3L 20462667 20462728 12 127 2.0 8.5 5.2 1.9 192 chr3L 20462536 intron atk - chr3L 20462632 intron atk - chr3L 20462728 intron atk - chr3L_12_20460001 chr3L_20460001 RAL-409_125b 2011 chr3L 20476715 20476774 chr3L 20484364 20484413 springer 16 7647 4.0 9.0 6.5 2.1 7698 chr3L 20476715 3` UTR isoQC + chr3L 20480564 intergenic not near genes chr3L 20484413 3` UTR ZnT77C - chr3L_16_20480001 chr3L_20480001 RAL-409_125b 2012 chr3L 20487620 20487666 chr3L 20488121 20488167 INE-1 8 501 7.0 1.5 4.2 1.5 547 chr3L 20487620 intron ZnT77C - chr3L 20487894 intron ZnT77C - chr3L 20488167 exon ZnT77C - chr3L_8_20485001 chr3L_20485001 RAL-409_125b 2013 chr3L 20505783 20505788 chr3L 20507131 20507136 4 1348 22.0 36.0 29.0 0.1 1353 chr3L 20505783 intron CG32425 + chr3L 20506460 intron,exon CG32425 +,CG5078 + chr3L 20507136 intron,exon CG32425 +,CG5078 + chr3L_4_20505001 chr3L_20505001 RAL-409_125b 2014 chr3L 20505789 20505836 chr3L 20507124 20507182 10 1340 20.5 33.5 27.0 0.4 1393 chr3L 20505789 intron CG32425 + chr3L 20506486 intron,exon CG32425 +,CG5078 + chr3L 20507182 intron,exon CG32425 +,CG5078 + chr3L_10_20505001 chr3L_20505001 RAL-409_125b 2015 chr3L 20505232 20505285 chr3L 20508490 20508543 8 3262 35.5 30.0 32.8 0.2 3311 chr3L 20505232 intron,exon CG32425 +,CG17637 + chr3L 20506888 intron,exon CG32425 +,CG5078 + chr3L 20508543 intron CG32425 + chr3L_8_20505001 chr3L_20505001 RAL-409_125b 2016 chr3L 20525228 20525229 chr3L 22908066 22908067 6 2382838 15.0 15.0 15.0 0.4 2382839 chr3L 20525228 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_6_21715001 chr3L_21715001 RAL-409_125b 2017 chr3L 20590041 20590090 chr3L 20590609 20590679 412 18 579 4.5 2.5 3.5 4.0 638 chr3L 20590041 intergenic not near genes chr3L 20590360 intergenic not near genes chr3L 20590679 intergenic not near genes chr3L_18_20590001 chr3L_20590001 RAL-409_125b 2018 chr3L 20699894 20699925 chr3L 20699984 20700049 11 114 5.0 1.5 3.2 2.6 155 chr3L 20699894 intergenic not near genes chr3L 20699972 intergenic not near genes chr3L 20700049 intergenic not near genes chr3L_11_20695001 chr3L_20695001 RAL-409_125b 2019 chr3L 20724301 20724319 chr3L 20724440 20724501 8 177 11.5 5.5 8.5 0.8 200 chr3L 20724301 intergenic not near genes chr3L 20724401 intergenic not near genes chr3L 20724501 intergenic not near genes chr3L_8_20720001 chr3L_20720001 RAL-409_125b 2020 chr3L 20739457 20739500 chr3L 20739622 20739665 4 165 4.5 4.0 4.2 0.8 208 chr3L 20739457 intron CG13252 + chr3L 20739561 intron CG13252 + chr3L 20739665 intron CG13252 + chr3L_4_20735001 chr3L_20735001 RAL-409_125b 2021 chr3L 20821237 20821311 chr3L 20824898 20824972 NOF 14 3657 7.5 8.5 8.0 1.6 3735 chr3L 20821237 intron Pka-R1 + chr3L 20823104 intron Pka-R1 + chr3L 20824972 intron Pka-R1 + chr3L_14_20820001 chr3L_20820001 RAL-409_125b 2022 chr3L 20849236 20849288 chr3L 20849358 20849417 18 128 9.0 5.5 7.2 2.2 181 chr3L 20849236 intron CG32432 - chr3L 20849326 intron CG32432 - chr3L 20849417 intron CG32432 - chr3L_18_20845001 chr3L_20845001 RAL-409_125b 2023 chr3L 20883726 20883775 chr3L 20883901 20883953 9 173 7.5 4.5 6.0 1.3 227 chr3L 20883726 intron CG32432 - chr3L 20883840 intron CG32432 - chr3L 20883953 intron CG32432 - chr3L_9_20880001 chr3L_20880001 RAL-409_125b 2024 chr3L 20917050 20917110 chr3L 20917177 20917232 10 123 8.5 6.5 7.5 1.2 182 chr3L 20917050 intergenic not near genes chr3L 20917141 intergenic not near genes chr3L 20917232 intergenic not near genes chr3L_10_20915001 chr3L_20915001 RAL-409_125b 2025 chr3L 21010329 21010378 chr3L 21010480 21010536 10 154 9.0 5.5 7.2 1.2 207 chr3L 21010329 intron skd - chr3L 21010432 intron skd - chr3L 21010536 intron skd - chr3L_10_21010001 chr3L_21010001 RAL-409_125b 2026 chr3L 21014879 21014946 chr3L 21023396 21023442 Tirant 12 8510 4.5 5.0 4.8 2.1 8563 chr3L 21014879 intron skd - chr3L 21019160 intron skd - chr3L 21023442 intron skd - chr3L_12_21015001 chr3L_21015001 RAL-409_125b 2027 chr3L 21151831 21151882 chr3L 21156965 21157016 flea 12 5132 6.0 6.5 6.2 1.7 5185 chr3L 21151831 intron Ac78C - chr3L 21154424 intron Ac78C - chr3L 21157016 intron Ac78C - chr3L_12_21150001 chr3L_21150001 RAL-409_125b 2028 chr3L 21210199 21210259 chr3L 21210498 21210541 7 289 3.0 4.0 3.5 1.6 342 chr3L 21210199 intergenic CG10508 +,CG10510 - chr3L 21210370 5` UTR CG10508 + chr3L 21210541 5` UTR CG10508 + chr3L_7_21210001 chr3L_21210001 RAL-409_125b 2029 chr3L 21306106 21306170 chr3L 21315315 21315378 roo 17 9205 4.5 4.5 4.5 3.1 9272 chr3L 21306106 3` UTR CG7632 + chr3L 21310742 intron Pc - chr3L 21315378 3` UTR Pc - chr3L_17_21310001 chr3L_21310001 RAL-409_125b 2030 chr3L 21372694 21372742 chr3L 21379252 21379300 McClintock 5 6558 6.0 9.0 7.5 0.6 6606 chr3L 21372694 intergenic not near genes chr3L 21375997 intergenic not near genes chr3L 21379300 intergenic not near genes chr3L_5_21375001 chr3L_21375001 RAL-409_125b 2031 chr3L 21406955 21407019 chr3L 21407080 21407111 12 113 6.0 4.0 5.0 2.0 156 chr3L 21406955 intron rgn + chr3L 21407033 intron rgn + chr3L 21407111 intron rgn + chr3L_12_21405001 chr3L_21405001 RAL-409_125b 2032 chr3L 21498829 21498870 chr3L 21500480 21500495 1360 9 1661 4.0 6.5 5.2 1.5 1666 chr3L 21498829 5` UTR,intron CR43933 +,Glg1 - chr3L 21499662 intron Glg1 - chr3L 21500495 intron Glg1 - chr3L_9_21495001 chr3L_21495001 RAL-409_125b 2033 chr3L 21501128 21501161 chr3L 21501272 21501305 1360 4 144 6.0 13.0 9.5 0.4 177 chr3L 21501128 intron Glg1 - chr3L 21501216 intron Glg1 - chr3L 21501305 intron Glg1 - chr3L_4_21500001 chr3L_21500001 RAL-409_125b 2034 chr3L 21637280 21637346 chr3L 21637417 21637483 14 134 6.0 7.0 6.5 1.9 203 chr3L 21637280 exon CG32444 + chr3L 21637382 intron CG32444 + chr3L 21637483 intron CG32444 + chr3L_14_21635001 chr3L_21635001 RAL-409_125b 2035 chr3L 21671014 21671088 chr3L 21671212 21671286 15 197 4.5 6.0 5.2 2.4 272 chr3L 21671014 intergenic not near genes chr3L 21671150 intergenic not near genes chr3L 21671286 intergenic not near genes chr3L_15_21670001 chr3L_21670001 RAL-409_125b 2036 chr3L 21733077 21733097 chr3L 21733184 21733209 4 120 6.0 4.5 5.2 0.6 132 chr3L 21733077 exon CG14568 - chr3L 21733143 exon CG14568 - chr3L 21733209 exon CG14568 - chr3L_4_21730001 chr3L_21730001 RAL-409_125b 2037 chr3L 21736301 21736360 chr3L 21736552 21736609 6 248 0.0 11.5 5.8 0.9 308 chr3L 21736301 intergenic CR43888 + chr3L 21736455 intergenic CR43888 + chr3L 21736609 intergenic CR43888 + chr3L_6_21735001 chr3L_21735001 RAL-409_125b 2038 chr3L 21749317 21749350 chr3L 21754482 21754499 Doc 6 5170 3.5 4.0 3.8 1.2 5182 chr3L 21749317 intron Syn1 - chr3L 21751908 intron Syn1 - chr3L 21754499 intron Syn1 - chr3L_6_21750001 chr3L_21750001 RAL-409_125b 2039 chr3L 21758511 21758552 chr3L 21758858 21758901 10 350 33.0 27.5 30.2 0.3 390 chr3L 21758511 intron Syn1 - chr3L 21758706 intron Syn1 - chr3L 21758901 intron Syn1 - chr3L_10_21755001 chr3L_21755001 RAL-409_125b 2040 chr3L 21769015 21769027 chr3L 21769147 21769164 5 134 10.5 8.0 9.2 0.5 149 chr3L 21769015 intron,intron Syn1 -,CG42689 + chr3L 21769090 intron,intron Syn1 -,CG42689 + chr3L 21769164 intron,intron Syn1 -,CG42689 + chr3L_5_21765001 chr3L_21765001 RAL-409_125b 2041 chr3L 21769028 21769077 chr3L 21769145 21769214 10 135 5.0 8.0 6.5 1.3 186 chr3L 21769028 intron,intron Syn1 -,CG42689 + chr3L 21769121 intron,intron Syn1 -,CG42689 + chr3L 21769214 intron,intron Syn1 -,CG42689 + chr3L_10_21765001 chr3L_21765001 RAL-409_125b 2042 chr3L 21770011 21770040 chr3L 21770127 21770162 7 122 7.5 6.5 7.0 0.9 151 chr3L 21770011 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L 21770086 5` UTR,intron,intron Syn1 -,CG42689 +,CG7370 + chr3L 21770162 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L_7_21770001 chr3L_21770001 RAL-409_125b 2043 chr3L 21802816 21802846 chr3L 21803180 21803186 8 362 4.5 5.5 5.0 1.3 370 chr3L 21802816 intergenic not near genes chr3L 21803001 intergenic not near genes chr3L 21803186 intergenic not near genes chr3L_8_21800001 chr3L_21800001 RAL-409_125b 2044 chr3L 21840806 21840851 chr3L 21840961 21841025 13 168 5.5 7.0 6.2 1.8 219 chr3L 21840806 intron P5CDh1 - chr3L 21840916 intron P5CDh1 - chr3L 21841025 intron P5CDh1 - chr3L_13_21840001 chr3L_21840001 RAL-409_125b 2045 chr3L 21932308 21932369 chr3L 21932436 21932490 9 125 5.5 7.0 6.2 1.2 182 chr3L 21932308 3` UTR mub + chr3L 21932399 3` UTR mub + chr3L 21932490 3` UTR mub + chr3L_9_21930001 chr3L_21930001 RAL-409_125b 2046 chr3L 22099633 22099690 chr3L 22105869 22105926 3S18 14 6230 5.0 4.0 4.5 2.5 6293 chr3L 22099633 intergenic not near genes chr3L 22102780 intergenic not near genes chr3L 22105926 intergenic not near genes chr3L_14_22100001 chr3L_22100001 RAL-409_125b 2047 chr3L 22116155 22116192 chr3L 22116304 22116349 13 149 4.5 10.0 7.2 1.6 194 chr3L 22116155 intergenic not near genes chr3L 22116252 intergenic not near genes chr3L 22116349 intergenic not near genes chr3L_13_22115001 chr3L_22115001 RAL-409_125b 2048 chr3L 22169410 22169482 chr3L 22169552 22169613 14 138 6.0 8.5 7.2 1.7 203 chr3L 22169410 intron olf413 + chr3L 22169512 intron olf413 + chr3L 22169613 intron olf413 + chr3L_14_22165001 chr3L_22165001 RAL-409_125b 2049 chr3L 22241277 22241321 chr3L 22241402 22241411 5 112 17.0 16.0 16.5 0.3 134 chr3L 22241277 intron olf413 + chr3L 22241344 intron olf413 + chr3L 22241411 intron olf413 + chr3L_5_22240001 chr3L_22240001 RAL-409_125b 2050 chr3L 22361920 22361967 chr3L 22362021 22362068 14 114 4.5 5.0 4.8 2.4 148 chr3L 22361920 intron Ten-m - chr3L 22361994 intron Ten-m - chr3L 22362068 intron Ten-m - chr3L_14_22360001 chr3L_22360001 RAL-409_125b 2051 chr3L 22395576 22395621 chr3L 22395684 22395754 15 119 3.5 3.5 3.5 3.3 178 chr3L 22395576 intron Ten-m - chr3L 22395665 intron Ten-m - chr3L 22395754 intron Ten-m - chr3L_15_22395001 chr3L_22395001 RAL-409_125b 2052 chr3L 22411338 22411359 chr3L 22411449 22411454 6 104 4.0 7.0 5.5 0.9 116 chr3L 22411338 intergenic not near genes chr3L 22411396 intergenic not near genes chr3L 22411454 intergenic not near genes chr3L_6_22410001 chr3L_22410001 RAL-409_125b 2053 chr3L 22411361 22411399 chr3L 22411447 22411511 11 104 4.5 7.0 5.8 1.6 150 chr3L 22411361 intergenic not near genes chr3L 22411436 intergenic not near genes chr3L 22411511 intergenic not near genes chr3L_11_22410001 chr3L_22410001 RAL-409_125b 2054 chr3L 22431692 22431715 chr3L 22432296 22432329 6 610 9.5 8.0 8.8 0.6 637 chr3L 22431692 intergenic not near genes chr3L 22432010 intergenic not near genes chr3L 22432329 intergenic not near genes chr3L_6_22430001 chr3L_22430001 RAL-409_125b 2055 chr3L 22522658 22522724 chr3L 22522779 22522851 16 126 7.0 5.5 6.2 2.2 193 chr3L 22522658 intergenic not near genes chr3L 22522754 intergenic not near genes chr3L 22522851 intergenic not near genes chr3L_16_22520001 chr3L_22520001 RAL-409_125b 2056 chr3L 22555735 22555798 chr3L 22563255 22563281 blood 8 7501 6.0 5.0 5.5 1.2 7546 chr3L 22555735 intergenic not near genes chr3L 22559508 intergenic not near genes chr3L 22563281 intergenic not near genes chr3L_8_22555001 chr3L_22555001 RAL-409_125b 2057 chr3L 22577602 22577646 chr3L 22582410 22582434 Doc 10 4827 3.0 4.5 3.8 2.1 4832 chr3L 22577602 intergenic not near genes chr3L 22580018 intergenic not near genes chr3L 22582434 3` UTR CG14459 - chr3L_10_22580001 chr3L_22580001 RAL-409_125b 2058 chr3L 22587169 22587220 chr3L 22587316 22587367 6 146 13.5 10.0 11.8 0.5 198 chr3L 22587169 intron CG14459 - chr3L 22587268 intron CG14459 - chr3L 22587367 intron CG14459 - chr3L_6_22585001 chr3L_22585001 RAL-409_125b 2059 chr3L 22587227 22587237 chr3L 22587309 22587384 6 134 10.0 9.0 9.5 0.6 157 chr3L 22587227 intron CG14459 - chr3L 22587306 intron CG14459 - chr3L 22587384 intron CG14459 - chr3L_6_22585001 chr3L_22585001 RAL-409_125b 2060 chr3L 22617147 22617166 chr3L 22624649 22624667 blood 9 7501 13.5 9.0 11.2 0.7 7520 chr3L 22617147 intron CG14459 - chr3L 22620907 intron CG14459 - chr3L 22624667 intron CG14459 - chr3L_9_22620001 chr3L_22620001 RAL-409_125b 2061 chr3L 22617174 22617190 chr3L 22624643 22624692 blood 7 7493 11.0 9.0 10.0 0.6 7518 chr3L 22617174 intron CG14459 - chr3L 22620933 intron CG14459 - chr3L 22624692 intron CG14459 - chr3L_7_22620001 chr3L_22620001 RAL-409_125b 2062 chr3L 22659036 22659055 chr3L 22659144 22659180 4 118 9.5 8.0 8.8 0.4 144 chr3L 22659036 intergenic not near genes chr3L 22659108 intergenic not near genes chr3L 22659180 intergenic not near genes chr3L_4_22655001 chr3L_22655001 RAL-409_125b 2063 chr3L 22659060 22659084 chr3L 22659139 22659212 9 102 8.0 9.5 8.8 0.9 152 chr3L 22659060 intergenic not near genes chr3L 22659136 intergenic not near genes chr3L 22659212 intergenic not near genes chr3L_9_22655001 chr3L_22655001 RAL-409_125b 2064 chr3L 22797296 22797358 chr3L 22797439 22797501 14 140 6.0 4.5 5.2 2.3 205 chr3L 22797296 3` UTR jim - chr3L 22797398 3` UTR jim - chr3L 22797501 3` UTR jim - chr3L_14_22795001 chr3L_22795001 RAL-409_125b 2065 chr3L 22853418 22853432 chr3L 22853555 22853569 4 136 12.5 8.5 10.5 0.3 151 chr3L 22853418 5` UTR,5` UTR CR43426 +,CG32462 - chr3L 22853494 5` UTR,5` UTR CR43426 +,CG32462 - chr3L 22853569 5` UTR CR43426 + chr3L_4_22850001 chr3L_22850001 RAL-409_125b 2066 chr3L 22853434 22853716 chr3L 22853551 22853845 27 132 5.5 6.5 6.0 3.9 411 chr3L 22853434 5` UTR,5` UTR CR43426 +,CG32462 - chr3L 22853640 5` UTR CR43426 + chr3L 22853845 5` UTR CR43426 + chr3L_27_22850001 chr3L_22850001 RAL-409_125b 2067 chr3L 22865948 22866004 chr3L 22867128 22867187 Doc 18 1181 8.0 7.0 7.5 2.1 1239 chr3L 22865948 exon CG33170 + chr3L 22866568 intron CG33170 + chr3L 22867187 intron CG33170 + chr3L_18_22865001 chr3L_22865001 RAL-409_125b 2068 chr3L 9102769 9102814 chr3L 22908066 22908066 5 13805274 30.0 15.0 22.5 0.2 13805297 chr3L 9102769 exon bol - chr3L 16005418 exon mRpS31 + chr3L 22908066 intergenic not near genes chr3L_5_16005001 chr3L_16005001 RAL-409_125b 2069 chr3L 19220633 19220637 chr3L 22908066 22908066 45 3687431 18.0 15.0 16.5 2.6 3687433 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_45_21060001 chr3L_21060001 RAL-409_125b 2070 chr3L 20525228 20525230 chr3L 22908066 22908066 13 2382837 15.0 15.0 15.0 0.8 2382838 chr3L 20525228 intron CG4825 - chr3L 21716647 intergenic not near genes chr3L 22908066 intergenic not near genes chr3L_13_21715001 chr3L_21715001 RAL-409_125b 2071 chr3L 9102755 9102781 chr3L 22908067 22908067 6 13805299 25.5 14.0 19.8 0.3 13805312 chr3L 9102755 exon bol - chr3L 16005411 exon mRpS31 + chr3L 22908067 intergenic not near genes chr3L_6_16005001 chr3L_16005001 RAL-409_125b 2072 chr3L 19220633 19220637 chr3L 22908067 22908067 25 3687432 18.0 14.0 16.0 1.5 3687434 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_25_21060001 chr3L_21060001 RAL-409_125b 2073 chr3L 20525228 20525230 chr3L 22908067 22908067 4 2382838 15.0 14.0 14.5 0.3 2382839 chr3L 20525228 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_4_21715001 chr3L_21715001 RAL-409_125b 2074 chr3L 22936691 22936708 chr3L 22938151 22938177 12 1434 30.5 27.0 28.8 0.4 1486 chr3L 22936691 intergenic not near genes chr3L 22937434 intergenic not near genes chr3L 22938177 intergenic not near genes chr3L_12_22935001 chr3L_22935001 RAL-409_125b 2075 chr3L 22982444 22982475 chr3L 22982876 22982920 INE-1 12 445 8.0 18.0 13.0 0.9 476 chr3L 22982444 intergenic not near genes chr3L 22982682 intergenic not near genes chr3L 22982920 intergenic not near genes chr3L_12_22980001 chr3L_22980001 RAL-409_125b 2076 chr3L 22989829 22989846 chr3L 22996853 22996870 297 6 7024 9.5 10.0 9.8 0.6 7041 chr3L 22989829 intergenic not near genes chr3L 22993350 intergenic not near genes chr3L 22996870 intergenic not near genes chr3L_6_22990001 chr3L_22990001 RAL-409_125b 2077 chr3L 22989848 22989891 chr3L 22996837 22996899 297 7 7014 4.0 4.5 4.2 1.3 7051 chr3L 22989848 intergenic not near genes chr3L 22993374 intergenic not near genes chr3L 22996899 intergenic not near genes chr3L_7_22990001 chr3L_22990001 RAL-409_125b 2078 chr3L 23008179 23008228 chr3L 23008300 23008344 5 117 4.5 6.5 5.5 0.8 165 chr3L 23008179 intron nrm + chr3L 23008262 intron nrm + chr3L 23008344 intron nrm + chr3L_5_23005001 chr3L_23005001 RAL-409_125b 2079 chr3L 23042183 23042249 chr3L 23048986 23049010 gypsy6 7 6791 4.5 9.0 6.8 0.9 6827 chr3L 23042183 intergenic not near genes chr3L 23045596 intergenic not near genes chr3L 23049010 intergenic not near genes chr3L_7_23045001 chr3L_23045001 RAL-409_125b 2080 chr3L 23101241 23101292 chr3L 23101502 23101550 5 259 8.5 10.0 9.2 0.5 309 chr3L 23101241 intron CkIIalpha + chr3L 23101396 intron CkIIalpha + chr3L 23101550 intron CkIIalpha + chr3L_5_23100001 chr3L_23100001 RAL-409_125b 2081 chr3L 23182226 23182274 chr3L 23182380 23182429 10 153 5.0 7.5 6.2 1.4 203 chr3L 23182226 intron CG34031 + chr3L 23182328 intron CG34031 + chr3L 23182429 intron CG34031 + chr3L_10_23180001 chr3L_23180001 RAL-409_125b 2082 chr3L 23205431 23205447 chr3L 23205690 23205693 5 267 8.5 5.0 6.8 0.6 262 chr3L 23205431 intergenic not near genes chr3L 23205562 intergenic not near genes chr3L 23205693 intergenic not near genes chr3L_5_23205001 chr3L_23205001 RAL-409_125b 2083 chr3L 23402263 23402321 chr3L 23402383 23402440 9 122 7.5 4.0 5.8 1.3 177 chr3L 23402263 intergenic not near genes chr3L 23402352 intergenic not near genes chr3L 23402440 intergenic not near genes chr3L_9_23400001 chr3L_23400001 RAL-409_125b 2084 chr3L 23875480 23875550 chr3L 23875606 23875660 14 121 5.0 3.5 4.2 2.7 180 chr3L 23875480 intron CG40470 - chr3L 23875570 intron CG40470 - chr3L 23875660 intron CG40470 - chr3L_14_23875001 chr3L_23875001 RAL-409_125b 2085 chr3L 24012371 24012420 chr3L 24020762 24020811 roo 9 8389 6.5 3.5 5.0 1.5 8440 chr3L 24012371 intergenic not near genes chr3L 24016591 intergenic not near genes chr3L 24020811 intergenic not near genes chr3L_9_24015001 chr3L_24015001 RAL-409_125b 2086 chr3L 24168773 24168817 chr3L 24176121 24176175 ZAM 6 7345 6.5 2.0 4.2 1.2 7402 chr3L 24168773 intron Snap25 + chr3L 24172474 intron Snap25 + chr3L 24176175 intron Snap25 + chr3L_6_24170001 chr3L_24170001 RAL-409_125b 2087 chr3L 24791865 24791889 chr3L 24796689 24796701 Doc 5 4823 8.0 3.5 5.8 0.7 4836 chr3L 24791865 intergenic not near genes chr3L 24794283 intergenic not near genes chr3L 24796701 intergenic not near genes chr3L_5_24790001 chr3L_24790001 RAL-409_125b 2088 chr3L 25353999 25354070 chr3L 25354230 25354290 8 227 3.0 3.0 3.0 2.0 291 chr3L 25353999 intergenic not near genes chr3L 25354144 intergenic not near genes chr3L 25354290 intergenic not near genes chr3L_8_25350001 chr3L_25350001 RAL-409_125b 2089 chr3L 28005540 28005606 chr3L 28005667 28005680 18 117 5.0 5.0 5.0 3.0 140 chr3L 28005540 intron CG17514 - chr3L 28005610 intron CG17514 - chr3L 28005680 intron CG17514 - chr3L_18_28005001 chr3L_28005001 RAL-409_125b 2090 chr3R 1521169 1521183 chr3R 1521272 1521291 5 115 12.5 16.0 14.2 0.3 122 chr3R 1521169 intergenic not near genes chr3R 1521230 intergenic not near genes chr3R 1521291 intergenic not near genes chr3R_5_1520001 chr3R_1520001 RAL-409_125b 2091 chr3R 2446812 2446850 chr3R 2449011 2449060 1360 6 2203 47.5 33.0 40.2 0.1 2248 chr3R 2446812 intergenic not near genes chr3R 2447936 intergenic not near genes chr3R 2449060 intergenic not near genes chr3R_6_2445001 chr3R_2445001 RAL-409_125b 2092 chr3R 2534139 2534145 chr3R 2541728 2541738 4 7598 11.5 10.5 11.0 0.3 7599 chr3R 2534139 intergenic not near genes chr3R 2537938 intergenic not near genes chr3R 2541738 intergenic not near genes chr3R_4_2535001 chr3R_2535001 RAL-409_125b 2093 chr3R 2556887 2556950 chr3R 2557570 2557639 10 687 24.5 16.5 20.5 0.5 752 chr3R 2556887 intron CG41056 - chr3R 2557263 intron CG41056 - chr3R 2557639 intron CG41056 - chr3R_10_2555001 chr3R_2555001 RAL-409_125b 2094 chr3R 4105002 4105020 chr3R 4110256 4110272 copia 4 5250 7.0 5.0 6.0 0.6 5270 chr3R 4105002 intergenic not near genes chr3R 4107637 intergenic not near genes chr3R 4110272 intergenic not near genes chr3R_4_4105001 chr3R_4105001 RAL-409_125b 2095 chr3R 4132876 4132930 chr3R 4133080 4133134 8 203 2.5 4.5 3.5 1.8 258 chr3R 4132876 intron Gfat1 + chr3R 4133005 intron Gfat1 + chr3R 4133134 intron Gfat1 + chr3R_8_4130001 chr3R_4130001 RAL-409_125b 2096 chr3R 4206035 4206095 chr3R 4211653 4211706 mdg3 14 5622 5.5 3.5 4.5 2.5 5671 chr3R 4206035 intron CG14636 - chr3R 4208870 intron CG14636 - chr3R 4211706 intron CG14636 - chr3R_14_4205001 chr3R_4205001 RAL-409_125b 2097 chr3R 4366714 4366780 chr3R 4375147 4375208 roo 20 8430 6.0 7.0 6.5 2.7 8494 chr3R 4366714 3` UTR CG1090 + chr3R 4370961 intergenic not near genes chr3R 4375208 5` UTR CR44922 + chr3R_20_4370001 chr3R_4370001 RAL-409_125b 2098 chr3R 4408376 4408432 chr3R 4412729 4412786 Juan 13 4351 4.5 4.5 4.5 2.4 4410 chr3R 4408376 intron CG32944 - chr3R 4410581 intron CG32944 - chr3R 4412786 intron CG32944 - chr3R_13_4410001 chr3R_4410001 RAL-409_125b 2099 chr3R 4609508 4609532 chr3R 4610722 4610746 1360 7 1212 12.0 9.5 10.8 0.6 1238 chr3R 4609508 intergenic not near genes chr3R 4610127 intergenic not near genes chr3R 4610746 intergenic not near genes chr3R_7_4610001 chr3R_4610001 RAL-409_125b 2100 chr3R 4609533 4609572 chr3R 4610717 4610781 1360 10 1209 7.0 8.5 7.8 1.1 1248 chr3R 4609533 intergenic not near genes chr3R 4610157 intergenic not near genes chr3R 4610781 intergenic not near genes chr3R_10_4610001 chr3R_4610001 RAL-409_125b 2101 chr3R 4657237 4657274 chr3R 4657591 4657603 5 345 5.5 13.0 9.2 0.5 366 chr3R 4657237 intron spartin + chr3R 4657420 intron spartin + chr3R 4657603 exon spartin + chr3R_5_4655001 chr3R_4655001 RAL-409_125b 2102 chr3R 4680664 4680736 chr3R 4680793 4680864 15 127 7.0 4.5 5.8 2.2 200 chr3R 4680664 intron CG43427 + chr3R 4680764 intron CG43427 + chr3R 4680864 intron CG43427 + chr3R_15_4680001 chr3R_4680001 RAL-409_125b 2103 chr3R 4745554 4745578 chr3R 4745678 4745710 6 128 11.0 4.0 7.5 0.7 156 chr3R 4745554 intron tacc - chr3R 4745632 intron tacc - chr3R 4745710 intron tacc - chr3R_6_4745001 chr3R_4745001 RAL-409_125b 2104 chr3R 4753203 4753264 chr3R 4757556 4757596 F-element 20 4346 5.5 8.0 6.8 2.6 4393 chr3R 4753203 intron,intron atms +,CG44098 - chr3R 4755400 intron,intron atms +,CG44098 - chr3R 4757596 intron,exon atms +,CG44098 - chr3R_20_4755001 chr3R_4755001 RAL-409_125b 2105 chr3R 4769123 4769135 chr3R 4769246 4769263 7 123 9.5 7.5 8.5 0.7 140 chr3R 4769123 intron,intron atms +,CG44098 - chr3R 4769193 intron,intron atms +,CG44098 - chr3R 4769263 intron,intron atms +,CG44098 - chr3R_7_4765001 chr3R_4765001 RAL-409_125b 2106 chr3R 4769136 4769187 chr3R 4769239 4769315 8 119 5.0 6.5 5.8 1.2 179 chr3R 4769136 intron,intron atms +,CG44098 - chr3R 4769226 intron,intron atms +,CG44098 - chr3R 4769315 intron,intron atms +,CG44098 - chr3R_8_4765001 chr3R_4765001 RAL-409_125b 2107 chr3R 4861532 4861560 chr3R 4861652 4861691 4 116 6.5 6.5 6.5 0.5 159 chr3R 4861532 intron opa + chr3R 4861612 intron opa + chr3R 4861691 intron opa + chr3R_4_4860001 chr3R_4860001 RAL-409_125b 2108 chr3R 4861561 4861594 chr3R 4861646 4861680 5 101 4.5 7.0 5.8 0.7 119 chr3R 4861561 intron opa + chr3R 4861620 intron opa + chr3R 4861680 intron opa + chr3R_5_4860001 chr3R_4860001 RAL-409_125b 2109 chr3R 4887437 4887503 chr3R 4894857 4894925 rover 10 7418 4.0 4.5 4.2 1.9 7488 chr3R 4887437 intergenic not near genes chr3R 4891181 intergenic not near genes chr3R 4894925 intergenic not near genes chr3R_10_4890001 chr3R_4890001 RAL-409_125b 2110 chr3R 4922292 4922345 chr3R 4922421 4922454 9 125 7.5 2.5 5.0 1.5 162 chr3R 4922292 intron Cdep + chr3R 4922373 intron Cdep + chr3R 4922454 intron Cdep + chr3R_9_4920001 chr3R_4920001 RAL-409_125b 2111 chr3R 4948330 4948391 chr3R 4949002 4949063 15 671 19.5 21.0 20.2 0.7 733 chr3R 4948330 intergenic snRNA:U1:82Eb -,UbcD6 - chr3R 4948696 intergenic UbcD6 - chr3R 4949063 3` UTR UbcD6 - chr3R_15_4945001 chr3R_4945001 RAL-409_125b 2112 chr3R 4965975 4966034 chr3R 4966107 4966156 13 138 3.5 3.0 3.2 3.1 181 chr3R 4965975 intron CG1124 + chr3R 4966066 intron CG1124 + chr3R 4966156 intron CG1124 + chr3R_13_4965001 chr3R_4965001 RAL-409_125b 2113 chr3R 4981405 4981445 chr3R 4981488 4981538 10 102 6.5 4.5 5.5 1.5 133 chr3R 4981405 intergenic not near genes chr3R 4981472 intergenic not near genes chr3R 4981538 intergenic CG14662 - chr3R_10_4980001 chr3R_4980001 RAL-409_125b 2114 chr3R 5045804 5045865 chr3R 5052956 5053017 HMS-Beagle 9 7151 6.5 3.0 4.8 1.6 7213 chr3R 5045804 3` UTR CR43635 - chr3R 5049410 intergenic not near genes chr3R 5053017 intergenic CR45588 - chr3R_9_5045001 chr3R_5045001 RAL-409_125b 2115 chr3R 5067940 5068001 chr3R 5073507 5073568 mdg3 17 5564 5.0 9.0 7.0 2.1 5628 chr3R 5067940 intergenic not near genes chr3R 5070754 intergenic not near genes chr3R 5073568 intergenic not near genes chr3R_17_5070001 chr3R_5070001 RAL-409_125b 2116 chr3R 5077251 5077298 chr3R 5077437 5077459 6 181 10.0 4.5 7.2 0.7 208 chr3R 5077251 intergenic not near genes chr3R 5077355 intergenic corto - chr3R 5077459 intergenic corto - chr3R_6_5075001 chr3R_5075001 RAL-409_125b 2117 chr3R 5158099 5158164 chr3R 5158242 5158274 18 140 6.5 7.0 6.8 2.3 175 chr3R 5158099 intron dpr16 + chr3R 5158186 intron dpr16 + chr3R 5158274 intron dpr16 + chr3R_18_5155001 chr3R_5155001 RAL-409_125b 2118 chr3R 5191366 5191378 chr3R 5191595 5191628 6 239 26.5 37.5 32.0 0.2 262 chr3R 5191366 intron cno - chr3R 5191497 intron cno - chr3R 5191628 intron cno - chr3R_6_5190001 chr3R_5190001 RAL-409_125b 2119 chr3R 5191364 5191437 chr3R 5191629 5191663 10 237 35.5 31.5 33.5 0.3 299 chr3R 5191364 intron cno - chr3R 5191514 intron cno - chr3R 5191663 intron cno - chr3R_10_5190001 chr3R_5190001 RAL-409_125b 2120 chr3R 5205108 5205135 chr3R 5205250 5205277 6 140 6.0 6.5 6.2 0.8 169 chr3R 5205108 intron cno - chr3R 5205192 intron cno - chr3R 5205277 intron cno - chr3R_6_5205001 chr3R_5205001 RAL-409_125b 2121 chr3R 5338353 5338417 chr3R 5343580 5343628 Rt1c 18 5219 9.0 7.0 8.0 2.0 5275 chr3R 5338353 intron mtd - chr3R 5340990 intron mtd - chr3R 5343628 intron mtd - chr3R_18_5340001 chr3R_5340001 RAL-409_125b 2122 chr3R 5397272 5397336 chr3R 5397401 5397465 10 129 3.5 3.0 3.2 2.4 193 chr3R 5397272 3` UTR CG1172 + chr3R 5397368 3` UTR CG1172 + chr3R 5397465 3` UTR CG1172 + chr3R_10_5395001 chr3R_5395001 RAL-409_125b 2123 chr3R 5445925 5445982 chr3R 5452435 5452481 Burdock 14 6508 7.0 8.0 7.5 1.6 6556 chr3R 5445925 intron CG14669 + chr3R 5449203 intron CG14669 + chr3R 5452481 intron CG14669 + chr3R_14_5445001 chr3R_5445001 RAL-409_125b 2124 chr3R 5502255 5502307 chr3R 5502619 5502631 7 348 4.0 7.5 5.8 1.0 376 chr3R 5502255 exon CG31547 - chr3R 5502443 5` UTR CG31547 - chr3R 5502631 5` UTR CG31547 - chr3R_7_5500001 chr3R_5500001 RAL-409_125b 2125 chr3R 5506804 5506860 chr3R 5506977 5507042 18 179 3.5 4.5 4.0 3.6 238 chr3R 5506804 intergenic not near genes chr3R 5506923 intergenic not near genes chr3R 5507042 intergenic not near genes chr3R_18_5505001 chr3R_5505001 RAL-409_125b 2126 chr3R 5578742 5578800 chr3R 5578869 5578927 11 126 11.0 6.0 8.5 1.2 185 chr3R 5578742 3` UTR CRMP + chr3R 5578834 3` UTR CRMP + chr3R 5578927 3` UTR CRMP + chr3R_11_5575001 chr3R_5575001 RAL-409_125b 2127 chr3R 5712056 5712108 chr3R 5712183 5712246 12 133 8.0 7.5 7.8 1.4 190 chr3R 5712056 3` UTR plx + chr3R 5712151 3` UTR plx + chr3R 5712246 3` UTR plx + chr3R_12_5710001 chr3R_5710001 RAL-409_125b 2128 chr3R 5745992 5746023 chr3R 5746262 5746299 pogo 4 277 4.0 8.5 6.2 0.6 307 chr3R 5745992 3` UTR Madm + chr3R 5746146 3` UTR Madm + chr3R 5746299 3` UTR Madm + chr3R_4_5745001 chr3R_5745001 RAL-409_125b 2129 chr3R 5746973 5747029 chr3R 5753214 5753270 diver 13 6240 5.5 8.5 7.0 1.6 6297 chr3R 5746973 intergenic Madm + chr3R 5750122 intergenic not near genes chr3R 5753270 intergenic CG2091 - chr3R_13_5750001 chr3R_5750001 RAL-409_125b 2130 chr3R 5772339 5772402 chr3R 5772547 5772604 17 207 6.0 9.0 7.5 2.0 265 chr3R 5772339 intron CG2082 - chr3R 5772472 intron CG2082 - chr3R 5772604 intron CG2082 - chr3R_17_5770001 chr3R_5770001 RAL-409_125b 2131 chr3R 5809081 5809133 chr3R 5809355 5809424 pogo 14 286 6.0 7.5 6.8 1.8 343 chr3R 5809081 3` UTR CG11000 + chr3R 5809252 3` UTR CG11000 + chr3R 5809424 3` UTR CG11000 + chr3R_14_5805001 chr3R_5805001 RAL-409_125b 2132 chr3R 5822376 5822405 chr3R 5823568 5823615 1360 6 1211 4.5 7.5 6.0 0.9 1239 chr3R 5822376 3` UTR CG2023 - chr3R 5822996 3` UTR CG2023 - chr3R 5823615 3` UTR CG2023 - chr3R_6_5820001 chr3R_5820001 RAL-409_125b 2133 chr3R 5846862 5846877 chr3R 5846967 5847003 4 120 6.5 4.0 5.2 0.6 141 chr3R 5846862 intergenic CG1213 +,CG14676 + chr3R 5846932 intergenic CG14676 +,CG1213 + chr3R 5847003 intergenic CG14676 +,CG1213 + chr3R_4_5845001 chr3R_5845001 RAL-409_125b 2134 chr3R 5895930 5895965 chr3R 5896181 5896229 5 258 3.5 9.0 6.2 0.7 299 chr3R 5895930 intron CG34113 - chr3R 5896080 intron CG34113 - chr3R 5896229 intron CG34113 - chr3R_5_5895001 chr3R_5895001 RAL-409_125b 2135 chr3R 5927535 5927581 chr3R 5927810 5927851 pogo 14 278 6.5 4.0 5.2 2.3 316 chr3R 5927535 intron CG34113 - chr3R 5927693 intron CG34113 - chr3R 5927851 intron CG34113 - chr3R_14_5925001 chr3R_5925001 RAL-409_125b 2136 chr3R 5931427 5931452 chr3R 5931554 5931575 7 130 3.0 7.0 5.0 1.2 148 chr3R 5931427 intron CG34113 - chr3R 5931501 intron CG34113 - chr3R 5931575 intron CG34113 - chr3R_7_5930001 chr3R_5930001 RAL-409_125b 2137 chr3R 5935328 5935373 chr3R 5935453 5935494 5 120 6.5 7.0 6.8 0.6 166 chr3R 5935328 intron CG34113 - chr3R 5935411 intron CG34113 - chr3R 5935494 intron CG34113 - chr3R_5_5935001 chr3R_5935001 RAL-409_125b 2138 chr3R 5943361 5943416 chr3R 5943484 5943545 15 126 3.0 6.5 4.8 2.6 184 chr3R 5943361 intron CG34113 - chr3R 5943453 intron CG34113 - chr3R 5943545 intron CG34113 - chr3R_15_5940001 chr3R_5940001 RAL-409_125b 2139 chr3R 6006281 6006349 chr3R 6006416 6006484 18 132 5.5 9.5 7.5 2.1 203 chr3R 6006281 intron Rm62 - chr3R 6006382 intron Rm62 - chr3R 6006484 intron Rm62 - chr3R_18_6005001 chr3R_6005001 RAL-409_125b 2140 chr3R 6015949 6015988 chr3R 6024442 6024500 Tirant 15 8510 3.5 3.0 3.2 3.6 8551 chr3R 6015949 intergenic not near genes chr3R 6020224 intergenic not near genes chr3R 6024500 intergenic not near genes chr3R_15_6020001 chr3R_6020001 RAL-409_125b 2141 chr3R 6043608 6043637 chr3R 6043863 6043904 6 266 9.5 8.5 9.0 0.6 296 chr3R 6043608 intergenic not near genes chr3R 6043756 intergenic not near genes chr3R 6043904 intergenic not near genes chr3R_6_6040001 chr3R_6040001 RAL-409_125b 2142 chr3R 6043638 6043658 chr3R 6043859 6043914 8 256 7.5 8.5 8.0 0.9 276 chr3R 6043638 intergenic not near genes chr3R 6043776 intergenic not near genes chr3R 6043914 intergenic not near genes chr3R_8_6040001 chr3R_6040001 RAL-409_125b 2143 chr3R 6048412 6048469 chr3R 6048545 6048590 15 128 2.0 4.0 3.0 3.8 178 chr3R 6048412 intergenic not near genes chr3R 6048501 intergenic not near genes chr3R 6048590 intergenic not near genes chr3R_15_6045001 chr3R_6045001 RAL-409_125b 2144 chr3R 6121134 6121180 chr3R 6121369 6121448 BS 12 246 0.0 4.0 2.0 4.0 314 chr3R 6121134 intergenic not near genes chr3R 6121291 intergenic not near genes chr3R 6121448 intergenic not near genes chr3R_12_6120001 chr3R_6120001 RAL-409_125b 2145 chr3R 6158474 6158532 chr3R 6167100 6167126 Tirant 8 8618 3.5 5.5 4.5 1.5 8652 chr3R 6158474 intergenic not near genes chr3R 6162800 intergenic not near genes chr3R 6167126 intergenic CG1077 + chr3R_8_6160001 chr3R_6160001 RAL-409_125b 2146 chr3R 6175132 6175199 chr3R 6182453 6182503 HMS-Beagle2 14 7316 6.0 8.5 7.2 1.7 7371 chr3R 6175132 intergenic Osi1 + chr3R 6178818 intron CR45194 + chr3R 6182503 intergenic CR45194 + chr3R_14_6175001 chr3R_6175001 RAL-409_125b 2147 chr3R 6191129 6191198 chr3R 6191254 6191318 16 126 10.0 6.5 8.2 1.7 189 chr3R 6191129 intron NPFR + chr3R 6191224 intron NPFR + chr3R 6191318 intron NPFR + chr3R_16_6190001 chr3R_6190001 RAL-409_125b 2148 chr3R 6330738 6330805 chr3R 6330903 6330965 10 163 4.5 5.0 4.8 1.7 227 chr3R 6330738 exon Osi18 + chr3R 6330852 intron Osi18 + chr3R 6330965 intron Osi18 + chr3R_10_6330001 chr3R_6330001 RAL-409_125b 2149 chr3R 6428773 6428834 chr3R 6428923 6428985 12 147 4.5 8.0 6.2 1.7 212 chr3R 6428773 intron gpp + chr3R 6428879 intron gpp + chr3R 6428985 intron gpp + chr3R_12_6425001 chr3R_6425001 RAL-409_125b 2150 chr3R 6461550 6461596 chr3R 6461680 6461726 12 130 7.0 10.0 8.5 1.3 176 chr3R 6461550 intergenic not near genes chr3R 6461638 intergenic not near genes chr3R 6461726 intergenic not near genes chr3R_12_6460001 chr3R_6460001 RAL-409_125b 2151 chr3R 6504649 6504699 chr3R 6504792 6504849 14 154 6.0 7.5 6.8 1.8 200 chr3R 6504649 intergenic not near genes chr3R 6504749 intergenic not near genes chr3R 6504849 intergenic not near genes chr3R_14_6500001 chr3R_6500001 RAL-409_125b 2152 chr3R 6509988 6510040 chr3R 6515119 6515171 jockey 12 5128 3.5 6.0 4.8 2.1 5183 chr3R 6509988 intergenic not near genes chr3R 6512580 intergenic not near genes chr3R 6515171 intergenic not near genes chr3R_12_6510001 chr3R_6510001 RAL-409_125b 2153 chr3R 6519069 6519140 chr3R 6519227 6519301 15 160 6.0 6.0 6.0 2.1 232 chr3R 6519069 intergenic not near genes chr3R 6519185 intergenic not near genes chr3R 6519301 intergenic not near genes chr3R_15_6515001 chr3R_6515001 RAL-409_125b 2154 chr3R 6538170 6538186 chr3R 6538313 6538314 5 141 13.0 8.0 10.5 0.4 144 chr3R 6538170 intron dpr11 - chr3R 6538242 intron dpr11 - chr3R 6538314 exon dpr11 - chr3R_5_6535001 chr3R_6535001 RAL-409_125b 2155 chr3R 6538187 6538219 chr3R 6538303 6538352 8 132 10.0 5.5 7.8 0.9 165 chr3R 6538187 intron dpr11 - chr3R 6538270 intron dpr11 - chr3R 6538352 exon dpr11 - chr3R_8_6535001 chr3R_6535001 RAL-409_125b 2156 chr3R 6773737 6773775 chr3R 6773842 6773891 8 115 0.5 4.5 2.5 2.3 154 chr3R 6773737 intron CR42721 + chr3R 6773814 intron CR42721 + chr3R 6773891 intron CR42721 + chr3R_8_6770001 chr3R_6770001 RAL-409_125b 2157 chr3R 6803705 6803747 chr3R 6803840 6803854 5 121 3.0 3.5 3.2 1.2 149 chr3R 6803705 intergenic not near genes chr3R 6803780 intergenic not near genes chr3R 6803854 intergenic not near genes chr3R_5_6800001 chr3R_6800001 RAL-409_125b 2158 chr3R 6816712 6816755 chr3R 6816996 6817039 11 288 28.0 31.0 29.5 0.4 327 chr3R 6816712 intergenic CR42651 - chr3R 6816876 intergenic not near genes chr3R 6817039 intergenic not near genes chr3R_11_6815001 chr3R_6815001 RAL-409_125b 2159 chr3R 6827982 6828039 chr3R 6828108 6828165 19 123 5.5 7.0 6.2 2.6 183 chr3R 6827982 intron Scr - chr3R 6828074 intron Scr - chr3R 6828165 intron Scr - chr3R_19_6825001 chr3R_6825001 RAL-409_125b 2160 chr3R 6856333 6856384 chr3R 6856500 6856545 13 165 5.0 7.0 6.0 1.9 212 chr3R 6856333 intergenic not near genes chr3R 6856439 intergenic not near genes chr3R 6856545 intergenic not near genes chr3R_13_6855001 chr3R_6855001 RAL-409_125b 2161 chr3R 6918031 6918086 chr3R 6918159 6918209 9 126 6.0 2.5 4.2 1.7 178 chr3R 6918031 intron Antp - chr3R 6918120 intron Antp - chr3R 6918209 intron Antp - chr3R_9_6915001 chr3R_6915001 RAL-409_125b 2162 chr3R 6990436 6990482 chr3R 6990556 6990622 11 135 3.5 3.0 3.2 2.6 186 chr3R 6990436 intron Antp - chr3R 6990529 intron Antp - chr3R 6990622 intron Antp - chr3R_11_6990001 chr3R_6990001 RAL-409_125b 2163 chr3R 6991156 6991207 chr3R 6991266 6991308 11 106 3.0 2.0 2.5 3.1 152 chr3R 6991156 intron Antp - chr3R 6991232 intron Antp - chr3R 6991308 intron Antp - chr3R_11_6990001 chr3R_6990001 RAL-409_125b 2164 chr3R 7026831 7026876 chr3R 7026951 7027012 6 118 5.5 4.5 5.0 1.0 181 chr3R 7026831 intergenic not near genes chr3R 7026922 intergenic not near genes chr3R 7027012 intergenic not near genes chr3R_6_7025001 chr3R_7025001 RAL-409_125b 2165 chr3R 7036723 7036754 chr3R 7036847 7036883 9 126 7.5 7.5 7.5 1.1 160 chr3R 7036723 intergenic not near genes chr3R 7036803 intergenic not near genes chr3R 7036883 intergenic not near genes chr3R_9_7035001 chr3R_7035001 RAL-409_125b 2166 chr3R 7060224 7060247 chr3R 7060353 7060378 6 127 5.5 3.0 4.2 1.2 154 chr3R 7060224 3` UTR dj + chr3R 7060301 3` UTR dj + chr3R 7060378 3` UTR dj + chr3R_6_7060001 chr3R_7060001 RAL-409_125b 2167 chr3R 7092748 7092803 chr3R 7093361 7093406 12 608 6.0 6.5 6.2 1.7 658 chr3R 7092748 3` UTR CR43685 - chr3R 7093077 intron CR43685 - chr3R 7093406 3` UTR CR43685 - chr3R_12_7090001 chr3R_7090001 RAL-409_125b 2168 chr3R 7126469 7126516 chr3R 7126613 7126661 12 144 5.5 7.5 6.5 1.6 192 chr3R 7126469 3` UTR,3` UTR CG10098 +,CG10068 - chr3R 7126565 3` UTR CG10068 - chr3R 7126661 3` UTR CG10068 - chr3R_12_7125001 chr3R_7125001 RAL-409_125b 2169 chr3R 7173636 7173682 chr3R 7173766 7173812 11 128 5.5 4.5 5.0 1.8 176 chr3R 7173636 intron sas + chr3R 7173724 intron sas + chr3R 7173812 intron sas + chr3R_11_7170001 chr3R_7170001 RAL-409_125b 2170 chr3R 7210563 7210614 chr3R 7210690 7210744 9 130 1.0 5.5 3.2 2.1 181 chr3R 7210563 intergenic not near genes chr3R 7210654 intergenic not near genes chr3R 7210744 intergenic not near genes chr3R_9_7210001 chr3R_7210001 RAL-409_125b 2171 chr3R 7396324 7396376 chr3R 7396477 7396529 10 152 3.0 10.0 6.5 1.3 205 chr3R 7396324 intergenic not near genes chr3R 7396426 intergenic not near genes chr3R 7396529 intergenic not near genes chr3R_10_7395001 chr3R_7395001 RAL-409_125b 2172 chr3R 7404945 7404968 chr3R 7405065 7405094 10 122 3.5 14.0 8.8 1.0 149 chr3R 7404945 intergenic not near genes chr3R 7405020 intergenic not near genes chr3R 7405094 intergenic not near genes chr3R_10_7405001 chr3R_7405001 RAL-409_125b 2173 chr3R 7526283 7526319 chr3R 7526378 7526413 9 115 12.0 8.5 10.2 0.8 130 chr3R 7526283 intron alpha-Est6 - chr3R 7526348 intron alpha-Est6 - chr3R 7526413 intron alpha-Est6 - chr3R_9_7525001 chr3R_7525001 RAL-409_125b 2174 chr3R 7533479 7533556 chr3R 7533670 7533701 20 184 2.5 7.5 5.0 3.3 222 chr3R 7533479 intergenic alpha-Est5 - chr3R 7533590 3` UTR alpha-Est5 - chr3R 7533701 3` UTR alpha-Est5 - chr3R_20_7530001 chr3R_7530001 RAL-409_125b 2175 chr3R 7548552 7548631 chr3R 7548681 7548751 15 126 4.0 4.5 4.2 2.9 199 chr3R 7548552 intron alpha-Est1 - chr3R 7548652 intron alpha-Est1 - chr3R 7548751 intron alpha-Est1 - chr3R_15_7545001 chr3R_7545001 RAL-409_125b 2176 chr3R 7578699 7578760 chr3R 7578897 7578959 11 196 5.5 2.5 4.0 2.2 260 chr3R 7578699 intron CG34127 - chr3R 7578829 intron CG34127 - chr3R 7578959 intron CG34127 - chr3R_11_7575001 chr3R_7575001 RAL-409_125b 2177 chr3R 7599444 7599504 chr3R 7599580 7599648 19 140 4.0 6.0 5.0 3.2 204 chr3R 7599444 intron CG34127 - chr3R 7599546 intron CG34127 - chr3R 7599648 intron CG34127 - chr3R_19_7595001 chr3R_7595001 RAL-409_125b 2178 chr3R 7621483 7621555 chr3R 7621623 7621695 12 136 1.0 2.5 1.8 4.3 212 chr3R 7621483 intron CG34127 - chr3R 7621589 intron CG34127 - chr3R 7621695 intron CG34127 - chr3R_12_7620001 chr3R_7620001 RAL-409_125b 2179 chr3R 7627145 7627159 chr3R 7627290 7627305 5 145 13.5 7.0 10.2 0.4 160 chr3R 7627145 intron,3` UTR CG34127 -,CR44332 - chr3R 7627225 intron,3` UTR CG34127 -,CR44332 - chr3R 7627305 intron CG34127 - chr3R_5_7625001 chr3R_7625001 RAL-409_125b 2180 chr3R 7627164 7627207 chr3R 7627281 7627353 5 137 5.5 6.5 6.0 0.7 189 chr3R 7627164 intron,3` UTR CG34127 -,CR44332 - chr3R 7627258 intron,3` UTR CG34127 -,CR44332 - chr3R 7627353 intron CG34127 - chr3R_5_7625001 chr3R_7625001 RAL-409_125b 2181 chr3R 7694541 7694605 chr3R 7713641 7713716 invader3 7 19104 3.0 4.5 3.8 1.5 19175 chr3R 7694541 3` UTR Nlg1 + chr3R 7704128 intergenic not near genes chr3R 7713716 intergenic not near genes chr3R_7_7700001 chr3R_7700001 RAL-409_125b 2182 chr3R 7729420 7729490 chr3R 7737408 7737473 Stalker2 29 7985 5.0 7.0 6.0 4.1 8053 chr3R 7729420 intergenic not near genes chr3R 7733446 intergenic not near genes chr3R 7737473 intergenic not near genes chr3R_29_7730001 chr3R_7730001 RAL-409_125b 2183 chr3R 7793297 7793366 chr3R 7793423 7793493 6 126 6.0 5.0 5.5 0.9 196 chr3R 7793297 3` UTR CG10086 + chr3R 7793395 3` UTR CG10086 + chr3R 7793493 intergenic CG10086 + chr3R_6_7790001 chr3R_7790001 RAL-409_125b 2184 chr3R 7793369 7793375 chr3R 7793490 7793502 5 125 5.0 13.5 9.2 0.5 133 chr3R 7793369 3` UTR CG10086 + chr3R 7793436 3` UTR CG10086 + chr3R 7793502 intergenic CG10086 + chr3R_5_7790001 chr3R_7790001 RAL-409_125b 2185 chr3R 7819840 7819894 chr3R 7822087 7822122 7 2244 11.0 23.5 17.2 0.4 2282 chr3R 7819840 intron CG34384 + chr3R 7820981 intron CG34384 + chr3R 7822122 intron CG34384 + chr3R_7_7820001 chr3R_7820001 RAL-409_125b 2186 chr3R 7819931 7819994 chr3R 7822909 7822972 11 2978 20.0 44.5 32.2 0.3 3041 chr3R 7819931 intron CG34384 + chr3R 7821452 intron CG34384 + chr3R 7822972 intron CG34384 + chr3R_11_7820001 chr3R_7820001 RAL-409_125b 2187 chr3R 7823894 7823956 chr3R 7824027 7824091 11 131 7.5 5.0 6.2 1.5 197 chr3R 7823894 intron CG34384 + chr3R 7823992 intron CG34384 + chr3R 7824091 intron CG34384 + chr3R_11_7820001 chr3R_7820001 RAL-409_125b 2188 chr3R 7849603 7849669 chr3R 7850820 7850880 1360 10 1206 2.0 5.5 3.8 2.1 1277 chr3R 7849603 intron CG34384 + chr3R 7850242 intron CG34384 + chr3R 7850880 intron CG34384 + chr3R_10_7850001 chr3R_7850001 RAL-409_125b 2189 chr3R 7948416 7948465 chr3R 7948523 7948592 22 123 9.0 7.5 8.2 2.4 176 chr3R 7948416 intron dsx - chr3R 7948504 intron dsx - chr3R 7948592 intron dsx - chr3R_22_7945001 chr3R_7945001 RAL-409_125b 2190 chr3R 7955890 7955968 chr3R 7956017 7956057 10 118 5.0 4.0 4.5 1.8 167 chr3R 7955890 intron dsx - chr3R 7955974 intron dsx - chr3R 7956057 intron dsx - chr3R_10_7955001 chr3R_7955001 RAL-409_125b 2191 chr3R 7965271 7965325 chr3R 7965409 7965463 9 138 10.5 9.5 10.0 0.8 192 chr3R 7965271 intron dsx - chr3R 7965367 intron dsx - chr3R 7965463 intron dsx - chr3R_9_7965001 chr3R_7965001 RAL-409_125b 2192 chr3R 7973295 7973342 chr3R 7974409 7974435 1360 11 1111 3.5 10.0 6.8 1.4 1140 chr3R 7973295 intergenic not near genes chr3R 7973865 intergenic not near genes chr3R 7974435 3` UTR CD98hc - chr3R_11_7970001 chr3R_7970001 RAL-409_125b 2193 chr3R 8049027 8049036 chr3R 8049651 8049660 6 624 4.0 1.5 2.8 1.6 633 chr3R 8049027 intron CG43060 + chr3R 8049344 intron,intron CG43060 +,CG43618 + chr3R 8049660 intron CG43060 + chr3R_6_8045001 chr3R_8045001 RAL-409_125b 2194 chr3R 8090516 8090567 chr3R 8094043 8094074 297 11 3517 6.5 7.5 7.0 1.4 3558 chr3R 8090516 intergenic CR44330 + chr3R 8092295 intergenic not near genes chr3R 8094074 intergenic CG7900 + chr3R_11_8090001 chr3R_8090001 RAL-409_125b 2195 chr3R 8094367 8094393 chr3R 8099722 8099748 Transpac 9 5354 9.5 6.5 8.0 1.0 5381 chr3R 8094367 intron CG7900 + chr3R 8097058 intron CG7900 + chr3R 8099748 intron CG7900 + chr3R_9_8095001 chr3R_8095001 RAL-409_125b 2196 chr3R 8094395 8094417 chr3R 8099713 8099772 Transpac 7 5348 6.5 6.5 6.5 0.9 5377 chr3R 8094395 intron CG7900 + chr3R 8097084 intron CG7900 + chr3R 8099772 intron CG7900 + chr3R_7_8095001 chr3R_8095001 RAL-409_125b 2197 chr3R 8101736 8101742 chr3R 8104850 8104874 G2 4 3128 9.5 5.5 7.5 0.5 3138 chr3R 8101736 exon CG7900 + chr3R 8103305 intron CG7900 + chr3R 8104874 3` UTR CG7900 + chr3R_4_8100001 chr3R_8100001 RAL-409_125b 2198 chr3R 8107348 8107403 chr3R 8107526 8107587 20 181 6.5 9.0 7.8 2.3 239 chr3R 8107348 intron puc + chr3R 8107468 intron puc + chr3R 8107587 intron puc + chr3R_20_8105001 chr3R_8105001 RAL-409_125b 2199 chr3R 8133564 8133633 chr3R 8133699 8133768 22 132 8.0 8.0 8.0 2.4 204 chr3R 8133564 intergenic not near genes chr3R 8133666 intergenic not near genes chr3R 8133768 intergenic not near genes chr3R_22_8130001 chr3R_8130001 RAL-409_125b 2200 chr3R 8207541 8207585 chr3R 8208400 8208445 F-element 6 876 5.0 4.5 4.8 1.0 904 chr3R 8207541 intergenic not near genes chr3R 8207993 intergenic not near genes chr3R 8208445 intergenic not near genes chr3R_6_8205001 chr3R_8205001 RAL-409_125b 2201 chr3R 8304198 8304261 chr3R 8304344 8304407 19 145 7.0 5.0 6.0 2.7 209 chr3R 8304198 3` UTR Sgt1 - chr3R 8304302 3` UTR Sgt1 - chr3R 8304407 3` UTR Sgt1 - chr3R_19_8300001 chr3R_8300001 RAL-409_125b 2202 chr3R 8339246 8339247 chr3R 21907534 21907536 16 13568289 27.5 18.5 23.0 0.7 13568290 chr3R 8339246 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_16_15120001 chr3R_15120001 RAL-409_125b 2203 chr3R 8391168 8391208 chr3R 8391266 8391326 14 117 5.0 4.5 4.8 2.4 158 chr3R 8391168 intron CG45263 - chr3R 8391247 intron CG45263 - chr3R 8391326 exon CG45263 - chr3R_14_8390001 chr3R_8390001 RAL-409_125b 2204 chr3R 8402996 8403036 chr3R 8412186 8412252 roo 10 9208 7.0 4.5 5.8 1.5 9256 chr3R 8402996 intron CG45263 - chr3R 8407624 intron CG45263 - chr3R 8412252 intron CG45263 - chr3R_10_8405001 chr3R_8405001 RAL-409_125b 2205 chr3R 8412402 8412443 chr3R 8412552 8412597 9 162 5.0 3.0 4.0 1.8 195 chr3R 8412402 intron CG45263 - chr3R 8412500 intron CG45263 - chr3R 8412597 intron CG45263 - chr3R_9_8410001 chr3R_8410001 RAL-409_125b 2206 chr3R 8541308 8541368 chr3R 8541421 8541489 8 121 4.5 5.5 5.0 1.3 181 chr3R 8541308 intergenic not near genes chr3R 8541398 intergenic not near genes chr3R 8541489 intergenic not near genes chr3R_8_8540001 chr3R_8540001 RAL-409_125b 2207 chr3R 8542251 8542254 chr3R 8542431 8542455 4 190 13.5 6.5 10.0 0.4 204 chr3R 8542251 intergenic not near genes chr3R 8542353 intergenic not near genes chr3R 8542455 intergenic not near genes chr3R_4_8540001 chr3R_8540001 RAL-409_125b 2208 chr3R 8570437 8570494 chr3R 8575123 8575155 HMS-Beagle 6 4679 5.0 8.5 6.8 0.8 4718 chr3R 8570437 intergenic not near genes chr3R 8572796 intergenic not near genes chr3R 8575155 intergenic not near genes chr3R_6_8570001 chr3R_8570001 RAL-409_125b 2209 chr3R 8601745 8601796 chr3R 8610931 8610987 roo 13 9192 5.0 5.5 5.2 2.1 9242 chr3R 8601745 intron 5-HT2B + chr3R 8606366 intron 5-HT2B + chr3R 8610987 intron 5-HT2B + chr3R_13_8605001 chr3R_8605001 RAL-409_125b 2210 chr3R 8707325 8707337 chr3R 8709801 8709814 jockey 5 2481 11.0 4.5 7.8 0.6 2489 chr3R 8707325 intergenic not near genes chr3R 8708570 intergenic not near genes chr3R 8709814 intergenic not near genes chr3R_5_8705001 chr3R_8705001 RAL-409_125b 2211 chr3R 8707340 8707380 chr3R 8709799 8709871 jockey 8 2479 9.0 4.5 6.8 1.0 2531 chr3R 8707340 intergenic not near genes chr3R 8708606 intergenic not near genes chr3R 8709871 intergenic not near genes chr3R_8_8705001 chr3R_8705001 RAL-409_125b 2212 chr3R 8712145 8712206 chr3R 8712520 8712536 4 360 5.5 1.0 3.2 1.0 391 chr3R 8712145 intergenic not near genes chr3R 8712340 intergenic not near genes chr3R 8712536 intergenic CG8112 + chr3R_4_8710001 chr3R_8710001 RAL-409_125b 2213 chr3R 8744792 8744850 chr3R 8744913 8744947 13 121 10.5 7.5 9.0 1.3 155 chr3R 8744792 intron CG9801 - chr3R 8744870 intron CG9801 - chr3R 8744947 intron CG9801 - chr3R_13_8740001 chr3R_8740001 RAL-409_125b 2214 chr3R 8877132 8877152 chr3R 8877257 8877283 5 128 12.5 5.0 8.8 0.5 151 chr3R 8877132 intron pyd - chr3R 8877208 intron pyd - chr3R 8877283 intron pyd - chr3R_5_8875001 chr3R_8875001 RAL-409_125b 2215 chr3R 8877157 8877201 chr3R 8877253 8877330 9 123 6.5 5.0 5.8 1.3 173 chr3R 8877157 intron pyd - chr3R 8877244 intron pyd - chr3R 8877330 intron pyd - chr3R_9_8875001 chr3R_8875001 RAL-409_125b 2216 chr3R 8894830 8894897 chr3R 8896036 8896103 1360 18 1203 6.5 9.0 7.8 2.0 1273 chr3R 8894830 intron pyd - chr3R 8895466 intron pyd - chr3R 8896103 intron pyd - chr3R_18_8895001 chr3R_8895001 RAL-409_125b 2217 chr3R 8917854 8917911 chr3R 8917984 8918041 16 126 4.0 6.0 5.0 2.7 187 chr3R 8917854 intron pyd - chr3R 8917948 intron pyd - chr3R 8918041 intron pyd - chr3R_16_8915001 chr3R_8915001 RAL-409_125b 2218 chr3R 8973136 8973146 chr3R 8973274 8973282 4 138 13.5 10.0 11.8 0.3 146 chr3R 8973136 intergenic not near genes chr3R 8973209 intergenic not near genes chr3R 8973282 intergenic not near genes chr3R_4_8970001 chr3R_8970001 RAL-409_125b 2219 chr3R 8973149 8973198 chr3R 8973269 8973332 11 131 6.5 10.0 8.2 1.2 183 chr3R 8973149 intergenic not near genes chr3R 8973240 intergenic not near genes chr3R 8973332 intergenic not near genes chr3R_11_8970001 chr3R_8970001 RAL-409_125b 2220 chr3R 9082025 9082065 chr3R 9082137 9082198 9 128 5.5 6.0 5.8 1.3 173 chr3R 9082025 intron pum - chr3R 9082112 intron pum - chr3R 9082198 intron pum - chr3R_9_9080001 chr3R_9080001 RAL-409_125b 2221 chr3R 9108821 9108882 chr3R 9108947 9109008 19 125 4.5 4.5 4.5 3.5 187 chr3R 9108821 intron pum - chr3R 9108914 intron pum - chr3R 9109008 intron pum - chr3R_19_9105001 chr3R_9105001 RAL-409_125b 2222 chr3R 9118816 9118899 chr3R 9119222 9119296 14 389 3.0 10.0 6.5 1.9 480 chr3R 9118816 intron pum - chr3R 9119056 intron pum - chr3R 9119296 intron pum - chr3R_14_9115001 chr3R_9115001 RAL-409_125b 2223 chr3R 9191688 9191710 chr3R 9191923 9191937 6 234 10.5 4.0 7.2 0.7 249 chr3R 9191688 intron pum - chr3R 9191812 intron pum - chr3R 9191937 intron pum - chr3R_6_9190001 chr3R_9190001 RAL-409_125b 2224 chr3R 9191712 9191724 chr3R 9191919 9191936 4 219 10.0 4.0 7.0 0.5 224 chr3R 9191712 intron pum - chr3R 9191824 intron pum - chr3R 9191936 intron pum - chr3R_4_9190001 chr3R_9190001 RAL-409_125b 2225 chr3R 9191726 9191743 chr3R 9191917 9191933 5 204 8.5 4.0 6.2 0.7 207 chr3R 9191726 intron pum - chr3R 9191830 intron pum - chr3R 9191933 intron pum - chr3R_5_9190001 chr3R_9190001 RAL-409_125b 2226 chr3R 9204237 9204491 chr3R 9204339 9204632 14 124 16.0 7.0 11.5 1.1 395 chr3R 9204237 intron pum - chr3R 9204434 intron pum - chr3R 9204632 intron pum - chr3R_14_9200001 chr3R_9200001 RAL-409_125b 2227 chr3R 9204499 9204509 chr3R 9204634 9204659 5 145 12.5 7.5 10.0 0.5 160 chr3R 9204499 intron pum - chr3R 9204579 intron pum - chr3R 9204659 intron pum - chr3R_5_9200001 chr3R_9200001 RAL-409_125b 2228 chr3R 9204518 9204548 chr3R 9204632 9204693 10 142 6.0 7.0 6.5 1.3 175 chr3R 9204518 intron pum - chr3R 9204606 intron pum - chr3R 9204693 intron pum - chr3R_10_9200001 chr3R_9200001 RAL-409_125b 2229 chr3R 9278770 9278798 chr3R 9284058 9284107 Rt1a 9 5305 1.0 5.0 3.0 2.2 5337 chr3R 9278770 intergenic not near genes chr3R 9281438 intergenic not near genes chr3R 9284107 intergenic not near genes chr3R_9_9280001 chr3R_9280001 RAL-409_125b 2230 chr3R 9294986 9294997 chr3R 9295110 9295115 5 125 1.0 4.0 2.5 1.4 129 chr3R 9294986 3` UTR CG8861 - chr3R 9295050 3` UTR CG8861 - chr3R 9295115 3` UTR CG8861 - chr3R_5_9295001 chr3R_9295001 RAL-409_125b 2231 chr3R 9294998 9295042 chr3R 9295105 9295169 17 125 0.0 3.5 1.8 6.1 171 chr3R 9294998 3` UTR CG8861 - chr3R 9295084 3` UTR CG8861 - chr3R 9295169 3` UTR CG8861 - chr3R_17_9295001 chr3R_9295001 RAL-409_125b 2232 chr3R 9319550 9319590 chr3R 9320020 9320070 jockey 16 482 7.5 5.5 6.5 2.1 520 chr3R 9319550 intron CG8861 - chr3R 9319810 intron CG8861 - chr3R 9320070 intron CG8861 - chr3R_16_9315001 chr3R_9315001 RAL-409_125b 2233 chr3R 9344864 9344922 chr3R 9344991 9345055 14 130 6.5 7.0 6.8 1.8 191 chr3R 9344864 intron CG45050 + chr3R 9344960 intron CG45050 + chr3R 9345055 intron CG45050 + chr3R_14_9340001 chr3R_9340001 RAL-409_125b 2234 chr3R 9361804 9361840 chr3R 9362095 9362131 pogo 6 290 3.0 7.5 5.2 1.0 327 chr3R 9361804 3` UTR CG45050 + chr3R 9361968 3` UTR CG45050 + chr3R 9362131 3` UTR CG45050 + chr3R_6_9360001 chr3R_9360001 RAL-409_125b 2235 chr3R 9382770 9382840 chr3R 9382945 9383015 22 170 2.5 3.0 2.8 5.8 245 chr3R 9382770 intron FER - chr3R 9382892 intron FER - chr3R 9383015 intron FER - chr3R_22_9380001 chr3R_9380001 RAL-409_125b 2236 chr3R 9434647 9434717 chr3R 9434784 9434854 13 136 9.0 5.0 7.0 1.6 207 chr3R 9434647 intron ps + chr3R 9434750 intron ps + chr3R 9434854 intron ps + chr3R_13_9430001 chr3R_9430001 RAL-409_125b 2237 chr3R 9447435 9447444 chr3R 9447589 9447592 7 151 8.0 15.0 11.5 0.6 157 chr3R 9447435 intron ps + chr3R 9447514 intron ps + chr3R 9447592 intron ps + chr3R_7_9445001 chr3R_9445001 RAL-409_125b 2238 chr3R 9880176 9880245 chr3R 9883216 9883286 15 3042 32.5 44.5 38.5 0.4 3110 chr3R 9880176 intron Glut4EF + chr3R 9881731 intron Glut4EF + chr3R 9883286 intron Glut4EF + chr3R_15_9880001 chr3R_9880001 RAL-409_125b 2239 chr3R 9891411 9891458 chr3R 9891602 9891617 6 184 9.0 1.5 5.2 1.0 206 chr3R 9891411 intron Glut4EF + chr3R 9891514 intron Glut4EF + chr3R 9891617 intron Glut4EF + chr3R_6_9890001 chr3R_9890001 RAL-409_125b 2240 chr3R 9926215 9926264 chr3R 9926324 9926368 13 116 4.0 7.0 5.5 2.0 153 chr3R 9926215 intron Glut4EF + chr3R 9926292 intron Glut4EF + chr3R 9926368 intron Glut4EF + chr3R_13_9925001 chr3R_9925001 RAL-409_125b 2241 chr3R 10037615 10037681 chr3R 10037735 10037813 14 125 9.0 6.5 7.8 1.6 198 chr3R 10037615 intron Mical - chr3R 10037714 intron Mical - chr3R 10037813 intron Mical - chr3R_14_10035001 chr3R_10035001 RAL-409_125b 2242 chr3R 10073741 10073794 chr3R 10073900 10073953 11 158 4.5 6.5 5.5 1.7 212 chr3R 10073741 3` UTR nerfin-2 + chr3R 10073847 3` UTR CG5361 - chr3R 10073953 exon CG5361 - chr3R_11_10070001 chr3R_10070001 RAL-409_125b 2243 chr3R 10151055 10151113 chr3R 10151169 10151222 10 119 3.5 2.5 3.0 2.5 167 chr3R 10151055 intron Invadolysin + chr3R 10151138 intron Invadolysin + chr3R 10151222 intron,exon Invadolysin +,CG34303 - chr3R_10_10150001 chr3R_10150001 RAL-409_125b 2244 chr3R 10174089 10174142 chr3R 10174221 10174274 14 131 6.5 5.5 6.0 2.0 185 chr3R 10174089 intron CG12814 - chr3R 10174182 intron CG12814 - chr3R 10174274 intron CG12814 - chr3R_14_10170001 chr3R_10170001 RAL-409_125b 2245 chr3R 10183058 10183100 chr3R 10183185 10183222 10 126 6.5 4.0 5.2 1.6 164 chr3R 10183058 intron CG12814 - chr3R 10183140 intron CG12814 - chr3R 10183222 intron CG12814 - chr3R_10_10180001 chr3R_10180001 RAL-409_125b 2246 chr3R 10231746 10231806 chr3R 10237368 10237426 mdg3 22 5623 8.5 3.5 6.0 3.1 5680 chr3R 10231746 intron CG42795 + chr3R 10234586 intron CG42795 + chr3R 10237426 intron CG42795 + chr3R_22_10230001 chr3R_10230001 RAL-409_125b 2247 chr3R 10255339 10255377 chr3R 10260828 10260867 I-element 12 5486 8.5 6.5 7.5 1.4 5528 chr3R 10255339 intergenic Sirt6 -,CG3999 + chr3R 10258103 intron Sirt6 - chr3R 10260867 exon Sirt6 - chr3R_12_10255001 chr3R_10255001 RAL-409_125b 2248 chr3R 10306960 10306980 chr3R 10312175 10312200 4 5215 22.5 28.0 25.2 0.2 5240 chr3R 10306960 exon CG43143 + chr3R 10309580 exon CG6293 - chr3R 10312200 3` UTR Bruce - chr3R_4_10305001 chr3R_10305001 RAL-409_125b 2249 chr3R 10403022 10403059 chr3R 10403153 10403190 7 131 7.0 12.0 9.5 0.7 168 chr3R 10403022 3` UTR CG6325 - chr3R 10403106 3` UTR CG6325 - chr3R 10403190 3` UTR CG6325 - chr3R_7_10400001 chr3R_10400001 RAL-409_125b 2250 chr3R 10427378 10427440 chr3R 10427532 10427600 5 157 4.0 0.5 2.2 1.6 222 chr3R 10427378 intergenic not near genes chr3R 10427489 intergenic not near genes chr3R 10427600 intergenic not near genes chr3R_5_10425001 chr3R_10425001 RAL-409_125b 2251 chr3R 10428551 10428608 chr3R 10428808 10428865 11 245 1.5 4.5 3.0 2.8 314 chr3R 10428551 intergenic not near genes chr3R 10428708 intergenic not near genes chr3R 10428865 intergenic not near genes chr3R_11_10425001 chr3R_10425001 RAL-409_125b 2252 chr3R 10487602 10487614 chr3R 10487726 10487738 5 125 6.0 10.5 8.2 0.5 136 chr3R 10487602 intergenic not near genes chr3R 10487670 intergenic not near genes chr3R 10487738 intergenic not near genes chr3R_5_10485001 chr3R_10485001 RAL-409_125b 2253 chr3R 10535288 10535319 chr3R 10535438 10535458 9 149 4.0 10.5 7.2 1.1 170 chr3R 10535288 intron hth - chr3R 10535373 intron hth - chr3R 10535458 intron hth - chr3R_9_10535001 chr3R_10535001 RAL-409_125b 2254 chr3R 10594568 10594618 chr3R 10594684 10594747 7 131 5.5 5.5 5.5 1.1 179 chr3R 10594568 intron hth - chr3R 10594658 intron hth - chr3R 10594747 intron hth - chr3R_7_10590001 chr3R_10590001 RAL-409_125b 2255 chr3R 10627599 10627618 chr3R 10627752 10627771 6 155 6.5 9.5 8.0 0.7 172 chr3R 10627599 intergenic not near genes chr3R 10627685 intergenic not near genes chr3R 10627771 intergenic not near genes chr3R_6_10625001 chr3R_10625001 RAL-409_125b 2256 chr3R 10727606 10727671 chr3R 10727725 10727796 17 121 6.0 7.5 6.8 2.2 190 chr3R 10727606 intergenic not near genes chr3R 10727701 intergenic not near genes chr3R 10727796 intergenic not near genes chr3R_17_10725001 chr3R_10725001 RAL-409_125b 2257 chr3R 10732817 10732834 chr3R 10732944 10732958 5 129 10.0 5.5 7.8 0.6 141 chr3R 10732817 intergenic not near genes chr3R 10732888 intergenic not near genes chr3R 10732958 intergenic not near genes chr3R_5_10730001 chr3R_10730001 RAL-409_125b 2258 chr3R 10732837 10732870 chr3R 10732940 10732975 9 119 6.0 5.5 5.8 1.3 138 chr3R 10732837 intergenic not near genes chr3R 10732906 intergenic not near genes chr3R 10732975 intergenic not near genes chr3R_9_10730001 chr3R_10730001 RAL-409_125b 2259 chr3R 10785781 10785816 chr3R 10785904 10785945 8 126 11.5 7.5 9.5 0.8 164 chr3R 10785781 intron Rbp1 + chr3R 10785863 intron Rbp1 + chr3R 10785945 intron Rbp1 + chr3R_8_10785001 chr3R_10785001 RAL-409_125b 2260 chr3R 10804149 10804189 chr3R 10811731 10811771 17.6 7 7581 2.5 11.5 7.0 0.9 7622 chr3R 10804149 intergenic CG14692 - chr3R 10807960 intergenic not near genes chr3R 10811771 3` UTR CG14693 - chr3R_7_10805001 chr3R_10805001 RAL-409_125b 2261 chr3R 10868582 10868620 chr3R 10868670 10868716 5 91 8.0 4.0 6.0 0.7 134 chr3R 10868582 5` UTR SelR - chr3R 10868649 intergenic SelR -,Tsp86D + chr3R 10868716 5` UTR Tsp86D + chr3R_5_10865001 chr3R_10865001 RAL-409_125b 2262 chr3R 10886825 10886888 chr3R 10886956 10887018 8 130 4.0 3.0 3.5 1.8 193 chr3R 10886825 intron Leash + chr3R 10886922 intron Leash + chr3R 10887018 intron Leash + chr3R_8_10885001 chr3R_10885001 RAL-409_125b 2263 chr3R 10918559 10918612 chr3R 10918802 10918847 15 243 5.0 7.5 6.2 2.1 288 chr3R 10918559 intergenic not near genes chr3R 10918703 intergenic not near genes chr3R 10918847 intergenic not near genes chr3R_15_10915001 chr3R_10915001 RAL-409_125b 2264 chr3R 10919640 10919709 chr3R 10919767 10919837 11 127 3.0 3.0 3.0 2.8 197 chr3R 10919640 intergenic not near genes chr3R 10919738 intergenic not near genes chr3R 10919837 intergenic not near genes chr3R_11_10915001 chr3R_10915001 RAL-409_125b 2265 chr3R 10920009 10920065 chr3R 10920137 10920193 14 125 6.5 5.0 5.8 2.1 184 chr3R 10920009 intergenic not near genes chr3R 10920101 intergenic not near genes chr3R 10920193 intergenic not near genes chr3R_14_10920001 chr3R_10920001 RAL-409_125b 2266 chr3R 10944204 10944263 chr3R 10944333 10944389 6 134 2.0 8.0 5.0 1.0 185 chr3R 10944204 intergenic not near genes chr3R 10944296 intergenic not near genes chr3R 10944389 intergenic not near genes chr3R_6_10940001 chr3R_10940001 RAL-409_125b 2267 chr3R 10957832 10957885 chr3R 10963252 10963318 Rt1c 11 5425 2.0 4.0 3.0 2.8 5486 chr3R 10957832 intergenic not near genes chr3R 10960575 intergenic not near genes chr3R 10963318 intergenic not near genes chr3R_11_10960001 chr3R_10960001 RAL-409_125b 2268 chr3R 11048239 11048295 chr3R 11048452 11048505 9 210 6.5 4.5 5.5 1.4 266 chr3R 11048239 3` UTR CG34114 + chr3R 11048372 3` UTR CG34114 + chr3R 11048505 3` UTR CG34114 + chr3R_9_11045001 chr3R_11045001 RAL-409_125b 2269 chr3R 11085413 11085489 chr3R 11085540 11085616 6 125 3.5 2.5 3.0 1.5 203 chr3R 11085413 3` UTR CR44940 - chr3R 11085514 intergenic CR44940 - chr3R 11085616 intergenic CR44940 - chr3R_6_11085001 chr3R_11085001 RAL-409_125b 2270 chr3R 11130085 11130152 chr3R 11130218 11130284 9 134 4.0 0.0 2.0 3.0 199 chr3R 11130085 intergenic not near genes chr3R 11130184 intergenic not near genes chr3R 11130284 intergenic not near genes chr3R_9_11130001 chr3R_11130001 RAL-409_125b 2271 chr3R 11151678 11151702 chr3R 11156521 11156550 8 4845 28.5 22.0 25.2 0.3 4872 chr3R 11151678 3` UTR Ugt86Di - chr3R 11154114 intergenic Ugt86Di - chr3R 11156550 intergenic Ugt86Dc + chr3R_8_11150001 chr3R_11150001 RAL-409_125b 2272 chr3R 11174572 11174612 chr3R 11175336 11175363 5 759 19.0 26.0 22.5 0.2 791 chr3R 11174572 exon Ugt86Dj - chr3R 11174968 intron Ugt86Dj - chr3R 11175363 exon Ugt86Dj - chr3R_5_11170001 chr3R_11170001 RAL-409_125b 2273 chr3R 11197966 11197981 chr3R 11198085 11198122 6 140 10.0 4.5 7.2 0.7 156 chr3R 11197966 intron cu + chr3R 11198044 intron cu + chr3R 11198122 intron cu + chr3R_6_11195001 chr3R_11195001 RAL-409_125b 2274 chr3R 11214563 11214631 chr3R 11214722 11214790 16 156 9.5 8.0 8.8 1.6 227 chr3R 11214563 intergenic ZnT86D -,RpS25 - chr3R 11214676 intergenic ZnT86D -,RpS25 - chr3R 11214790 intergenic RpS25 -,ZnT86D - chr3R_16_11210001 chr3R_11210001 RAL-409_125b 2275 chr3R 11220235 11220279 chr3R 11220404 11220447 4 165 21.5 19.5 20.5 0.2 212 chr3R 11220235 intergenic CG6693 -,CG6689 - chr3R 11220341 3` UTR CG6693 - chr3R 11220447 3` UTR CG6693 - chr3R_4_11220001 chr3R_11220001 RAL-409_125b 2276 chr3R 11265883 11265916 chr3R 11266017 11266034 6 122 10.5 9.0 9.8 0.6 151 chr3R 11265883 intergenic not near genes chr3R 11265958 intergenic not near genes chr3R 11266034 intergenic not near genes chr3R_6_11265001 chr3R_11265001 RAL-409_125b 2277 chr3R 11302679 11302748 chr3R 11302801 11302879 5 126 5.0 6.5 5.8 0.7 200 chr3R 11302679 intron CR31386 - chr3R 11302779 intron CR31386 - chr3R 11302879 intron CR31386 - chr3R_5_11300001 chr3R_11300001 RAL-409_125b 2278 chr3R 11307163 11307217 chr3R 11307295 11307332 13 126 3.5 4.0 3.8 2.7 169 chr3R 11307163 intergenic not near genes chr3R 11307248 intergenic not near genes chr3R 11307332 intergenic not near genes chr3R_13_11305001 chr3R_11305001 RAL-409_125b 2279 chr3R 11321000 11321032 chr3R 11321120 11321162 7 123 6.5 5.5 6.0 1.0 162 chr3R 11321000 intergenic not near genes chr3R 11321081 intergenic not near genes chr3R 11321162 intergenic not near genes chr3R_7_11320001 chr3R_11320001 RAL-409_125b 2280 chr3R 11342510 11342574 chr3R 11342632 11342700 19 124 5.5 5.5 5.5 2.9 190 chr3R 11342510 intron pros + chr3R 11342605 intron pros + chr3R 11342700 intron pros + chr3R_19_11340001 chr3R_11340001 RAL-409_125b 2281 chr3R 11379210 11379254 chr3R 11388397 11388428 roo 7 9193 5.0 5.5 5.2 1.1 9218 chr3R 11379210 intron pros + chr3R 11383819 intron pros + chr3R 11388428 intron pros + chr3R_7_11380001 chr3R_11380001 RAL-409_125b 2282 chr3R 11476907 11476969 chr3R 11477059 11477106 13 149 8.5 8.5 8.5 1.4 199 chr3R 11476907 intergenic not near genes chr3R 11477006 intergenic not near genes chr3R 11477106 intergenic not near genes chr3R_13_11475001 chr3R_11475001 RAL-409_125b 2283 chr3R 11518789 11518845 chr3R 11518918 11518960 15 135 4.5 3.0 3.8 3.1 171 chr3R 11518789 intergenic not near genes chr3R 11518874 intergenic not near genes chr3R 11518960 intergenic not near genes chr3R_15_11515001 chr3R_11515001 RAL-409_125b 2284 chr3R 11665886 11665958 chr3R 11666087 11666160 16 197 4.0 2.0 3.0 4.0 274 chr3R 11665886 intron CG42327 + chr3R 11666023 intron CG42327 + chr3R 11666160 intron CG42327 + chr3R_16_11665001 chr3R_11665001 RAL-409_125b 2285 chr3R 11694681 11694754 chr3R 11694824 11694890 20 140 0.0 1.5 0.8 11.1 209 chr3R 11694681 intergenic Fer3 - chr3R 11694786 intergenic Fer3 - chr3R 11694890 intergenic not near genes chr3R_20_11690001 chr3R_11690001 RAL-409_125b 2286 chr3R 11757715 11757765 chr3R 11757840 11757900 16 129 6.5 5.0 5.8 2.4 185 chr3R 11757715 intron Lk6 - chr3R 11757808 intron Lk6 - chr3R 11757900 intron Lk6 - chr3R_16_11755001 chr3R_11755001 RAL-409_125b 2287 chr3R 11834145 11834192 chr3R 11834268 11834297 11 120 5.5 7.0 6.2 1.5 152 chr3R 11834145 intron CG6959 - chr3R 11834221 intron CG6959 - chr3R 11834297 intron CG6959 - chr3R_11_11830001 chr3R_11830001 RAL-409_125b 2288 chr3R 11840008 11840072 chr3R 11840155 11840211 13 139 6.5 5.5 6.0 1.9 203 chr3R 11840008 intron CG6959 - chr3R 11840110 intron CG6959 - chr3R 11840211 intron CG6959 - chr3R_13_11840001 chr3R_11840001 RAL-409_125b 2289 chr3R 11841017 11841083 chr3R 11846257 11846311 BS 14 5232 6.0 6.5 6.2 1.9 5294 chr3R 11841017 intron CG6959 - chr3R 11843664 intron CG6959 - chr3R 11846311 intron CG6959 - chr3R_14_11840001 chr3R_11840001 RAL-409_125b 2290 chr3R 11853414 11853470 chr3R 11853613 11853675 19 208 1.5 1.5 1.5 7.6 261 chr3R 11853414 intron CG6959 - chr3R 11853544 intron CG6959 - chr3R 11853675 intron CG6959 - chr3R_19_11850001 chr3R_11850001 RAL-409_125b 2291 chr3R 11919259 11919330 chr3R 11919397 11919468 17 119 3.5 9.0 6.2 2.4 209 chr3R 11919259 intron Cad87A - chr3R 11919364 intron Cad87A - chr3R 11919468 intron Cad87A - chr3R_17_11915001 chr3R_11915001 RAL-409_125b 2292 chr3R 11945335 11945399 chr3R 11945483 11945547 14 144 7.5 4.5 6.0 2.0 212 chr3R 11945335 intron Cad87A - chr3R 11945441 intron Cad87A - chr3R 11945547 intron Cad87A - chr3R_14_11945001 chr3R_11945001 RAL-409_125b 2293 chr3R 11957819 11957879 chr3R 11958152 11958212 S-element 6 328 5.0 0.5 2.8 1.6 393 chr3R 11957819 intergenic not near genes chr3R 11958016 intergenic not near genes chr3R 11958212 intergenic not near genes chr3R_6_11955001 chr3R_11955001 RAL-409_125b 2294 chr3R 11994968 11994989 chr3R 11995087 11995102 5 117 11.0 9.0 10.0 0.5 134 chr3R 11994968 exon Tk - chr3R 11995035 exon Tk - chr3R 11995102 exon Tk - chr3R_5_11995001 chr3R_11995001 RAL-409_125b 2295 chr3R 12022837 12022897 chr3R 12025064 12025123 pogo 14 2226 6.0 6.0 6.0 2.0 2286 chr3R 12022837 intergenic not near genes chr3R 12023980 intergenic not near genes chr3R 12025123 intergenic not near genes chr3R_14_12020001 chr3R_12020001 RAL-409_125b 2296 chr3R 12037270 12037342 chr3R 12037577 12037651 13 307 0.0 4.0 2.0 4.3 381 chr3R 12037270 intergenic not near genes chr3R 12037460 intergenic not near genes chr3R 12037651 intergenic not near genes chr3R_13_12035001 chr3R_12035001 RAL-409_125b 2297 chr3R 12080826 12080892 chr3R 12080942 12081020 14 122 5.0 9.0 7.0 1.8 194 chr3R 12080826 intron CG14741 - chr3R 12080923 intron CG14741 - chr3R 12081020 intron CG14741 - chr3R_14_12080001 chr3R_12080001 RAL-409_125b 2298 chr3R 12097216 12097264 chr3R 12097351 12097411 16 150 5.5 3.5 4.5 2.9 195 chr3R 12097216 intron dpr17 + chr3R 12097314 intron dpr17 + chr3R 12097411 intron dpr17 + chr3R_16_12095001 chr3R_12095001 RAL-409_125b 2299 chr3R 12102839 12102877 chr3R 12102978 12103019 10 138 6.5 4.0 5.2 1.6 180 chr3R 12102839 intron dpr17 + chr3R 12102929 intron dpr17 + chr3R 12103019 intron dpr17 + chr3R_10_12100001 chr3R_12100001 RAL-409_125b 2300 chr3R 12111845 12111923 chr3R 12111971 12112034 16 121 4.5 3.5 4.0 3.2 189 chr3R 12111845 intergenic dpr17 + chr3R 12111940 intergenic not near genes chr3R 12112034 intergenic not near genes chr3R_16_12110001 chr3R_12110001 RAL-409_125b 2301 chr3R 12112323 12112356 chr3R 12112443 12112460 5 115 5.5 5.5 5.5 0.8 137 chr3R 12112323 intergenic not near genes chr3R 12112392 intergenic not near genes chr3R 12112460 intergenic not near genes chr3R_5_12110001 chr3R_12110001 RAL-409_125b 2302 chr3R 12117480 12117487 chr3R 12117919 12117920 4 436 7.0 10.0 8.5 0.4 440 chr3R 12117480 intergenic not near genes chr3R 12117700 intergenic not near genes chr3R 12117920 intergenic not near genes chr3R_4_12115001 chr3R_12115001 RAL-409_125b 2303 chr3R 12117491 12117539 chr3R 12117918 12117978 13 427 3.5 9.5 6.5 1.7 487 chr3R 12117491 intergenic not near genes chr3R 12117734 intergenic not near genes chr3R 12117978 intergenic not near genes chr3R_13_12115001 chr3R_12115001 RAL-409_125b 2304 chr3R 12119834 12119907 chr3R 12119973 12120015 15 127 3.5 6.5 5.0 2.5 181 chr3R 12119834 intergenic not near genes chr3R 12119924 intergenic not near genes chr3R 12120015 intergenic not near genes chr3R_15_12115001 chr3R_12115001 RAL-409_125b 2305 chr3R 12297604 12297645 chr3R 12297730 12297741 8 110 10.5 10.0 10.2 0.7 137 chr3R 12297604 intron svp + chr3R 12297672 intron svp + chr3R 12297741 intron svp + chr3R_8_12295001 chr3R_12295001 RAL-409_125b 2306 chr3R 12392861 12393086 chr3R 12392996 12393184 18 131 7.5 6.0 6.8 2.3 323 chr3R 12392861 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12393022 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12393184 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R_18_12390001 chr3R_12390001 RAL-409_125b 2307 chr3R 12524104 12524155 chr3R 12524234 12524282 11 124 6.5 10.5 8.5 1.2 178 chr3R 12524104 intron Octbeta3R - chr3R 12524193 intron Octbeta3R - chr3R 12524282 intron Octbeta3R - chr3R_11_12520001 chr3R_12520001 RAL-409_125b 2308 chr3R 12568475 12568521 chr3R 12568580 12568646 13 116 5.0 5.5 5.2 2.1 171 chr3R 12568475 intron Octbeta2R - chr3R 12568560 intron Octbeta2R - chr3R 12568646 intron Octbeta2R - chr3R_13_12565001 chr3R_12565001 RAL-409_125b 2309 chr3R 12578621 12578688 chr3R 12578771 12578838 13 146 3.0 5.0 4.0 2.6 217 chr3R 12578621 intron Octbeta2R - chr3R 12578730 intron Octbeta2R - chr3R 12578838 intron Octbeta2R - chr3R_13_12575001 chr3R_12575001 RAL-409_125b 2310 chr3R 12717353 12717359 chr3R 12717753 12717759 6 400 14.0 6.0 10.0 0.5 406 chr3R 12717353 intron Men - chr3R 12717556 intron Men - chr3R 12717759 intron Men - chr3R_6_12715001 chr3R_12715001 RAL-409_125b 2311 chr3R 12717363 12717400 chr3R 12717752 12717800 10 399 10.0 6.0 8.0 1.1 437 chr3R 12717363 intron Men - chr3R 12717582 intron Men - chr3R 12717800 intron Men - chr3R_10_12715001 chr3R_12715001 RAL-409_125b 2312 chr3R 12720694 12720753 chr3R 12720904 12720958 4 212 20.0 14.5 17.2 0.2 264 chr3R 12720694 intron Men - chr3R 12720826 intron Men - chr3R 12720958 intron Men - chr3R_4_12720001 chr3R_12720001 RAL-409_125b 2313 chr3R 12735133 12735184 chr3R 12735433 12735484 12 298 5.0 8.0 6.5 1.6 351 chr3R 12735133 intergenic not near genes chr3R 12735308 intergenic not near genes chr3R 12735484 intergenic not near genes chr3R_12_12735001 chr3R_12735001 RAL-409_125b 2314 chr3R 12763060 12763150 chr3R 12763198 12763276 13 133 0.0 4.5 2.2 4.1 216 chr3R 12763060 intron beat-Vc - chr3R 12763168 intron beat-Vc - chr3R 12763276 intron beat-Vc - chr3R_13_12760001 chr3R_12760001 RAL-409_125b 2315 chr3R 12780260 12780296 chr3R 12780422 12780453 BS 6 161 6.0 0.5 3.2 1.4 193 chr3R 12780260 intron beat-Vc - chr3R 12780356 intron beat-Vc - chr3R 12780453 intron beat-Vc - chr3R_6_12780001 chr3R_12780001 RAL-409_125b 2316 chr3R 12782278 12782339 chr3R 12782669 12782730 10 390 4.0 1.0 2.5 2.9 452 chr3R 12782278 intron beat-Vc - chr3R 12782504 intron beat-Vc - chr3R 12782730 intron beat-Vc - chr3R_10_12780001 chr3R_12780001 RAL-409_125b 2317 chr3R 12787893 12787936 chr3R 12788026 12788069 12 130 7.5 4.5 6.0 1.7 176 chr3R 12787893 intergenic not near genes chr3R 12787981 intergenic not near genes chr3R 12788069 intergenic not near genes chr3R_12_12785001 chr3R_12785001 RAL-409_125b 2318 chr3R 12818986 12819049 chr3R 12819112 12819178 7 130 2.0 4.5 3.2 1.7 192 chr3R 12818986 intergenic not near genes chr3R 12819082 intergenic not near genes chr3R 12819178 intergenic not near genes chr3R_7_12815001 chr3R_12815001 RAL-409_125b 2319 chr3R 12866450 12866512 chr3R 12866651 12866713 11 201 7.0 11.5 9.2 1.1 263 chr3R 12866450 intergenic not near genes chr3R 12866582 intergenic not near genes chr3R 12866713 intergenic not near genes chr3R_11_12865001 chr3R_12865001 RAL-409_125b 2320 chr3R 12920132 12920176 chr3R 12925363 12925429 copia 12 5246 6.5 7.0 6.8 1.5 5297 chr3R 12920132 intron beat-Vb + chr3R 12922780 intron beat-Vb + chr3R 12925429 intron beat-Vb + chr3R_12_12920001 chr3R_12920001 RAL-409_125b 2321 chr3R 13075315 13075379 chr3R 13075446 13075505 15 129 7.5 4.5 6.0 2.1 190 chr3R 13075315 intron sim + chr3R 13075410 intron sim + chr3R 13075505 intron sim + chr3R_15_13075001 chr3R_13075001 RAL-409_125b 2322 chr3R 13135787 13135835 chr3R 13138002 13138050 pogo 16 2213 3.5 2.0 2.8 4.2 2263 chr3R 13135787 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136918 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138050 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_16_13135001 chr3R_13135001 RAL-409_125b 2323 chr3R 13138278 13138343 chr3R 13138409 13138429 13 129 4.5 5.0 4.8 2.2 151 chr3R 13138278 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138354 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138429 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_13_13135001 chr3R_13135001 RAL-409_125b 2324 chr3R 13143004 13143063 chr3R 13148613 13148668 mdg3 13 5608 5.0 4.0 4.5 2.4 5664 chr3R 13143004 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145836 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148668 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_13_13145001 chr3R_13145001 RAL-409_125b 2325 chr3R 13314061 13314121 chr3R 13318898 13318933 Doc 9 4832 3.5 5.5 4.5 1.6 4872 chr3R 13314061 intergenic not near genes chr3R 13316497 intergenic not near genes chr3R 13318933 intergenic CG45080 - chr3R_9_13315001 chr3R_13315001 RAL-409_125b 2326 chr3R 13364587 13364604 chr3R 13364721 13364738 4 133 8.0 0.0 4.0 0.8 151 chr3R 13364587 intron poly - chr3R 13364662 intron poly - chr3R 13364738 intron poly - chr3R_4_13360001 chr3R_13360001 RAL-409_125b 2327 chr3R 13418615 13418683 chr3R 13418741 13418809 23 124 5.0 3.5 4.2 4.4 194 chr3R 13418615 intergenic not near genes chr3R 13418712 intergenic not near genes chr3R 13418809 intergenic not near genes chr3R_23_13415001 chr3R_13415001 RAL-409_125b 2328 chr3R 13435355 13435408 chr3R 13435567 13435622 15 222 3.5 5.0 4.2 2.9 267 chr3R 13435355 intergenic yrt - chr3R 13435488 intergenic not near genes chr3R 13435622 intergenic not near genes chr3R_15_13435001 chr3R_13435001 RAL-409_125b 2329 chr3R 13517222 13517258 chr3R 13520084 13520118 jockey 7 2864 2.5 3.0 2.8 1.8 2896 chr3R 13517222 intergenic not near genes chr3R 13518670 intergenic not near genes chr3R 13520118 intergenic not near genes chr3R_7_13515001 chr3R_13515001 RAL-409_125b 2330 chr3R 13563300 13563352 chr3R 13563427 13563455 9 119 9.0 6.5 7.8 1.0 155 chr3R 13563300 intergenic not near genes chr3R 13563378 intergenic not near genes chr3R 13563455 intergenic not near genes chr3R_9_13560001 chr3R_13560001 RAL-409_125b 2331 chr3R 13603015 13603069 chr3R 13603145 13603204 14 138 6.5 3.0 4.8 2.4 189 chr3R 13603015 intergenic not near genes chr3R 13603110 intergenic not near genes chr3R 13603204 intergenic not near genes chr3R_14_13600001 chr3R_13600001 RAL-409_125b 2332 chr3R 13603312 13603366 chr3R 13603445 13603492 19 137 5.0 4.5 4.8 3.3 180 chr3R 13603312 intergenic not near genes chr3R 13603402 intergenic not near genes chr3R 13603492 intergenic not near genes chr3R_19_13600001 chr3R_13600001 RAL-409_125b 2333 chr3R 13604034 13604087 chr3R 13604310 13604372 16 282 3.5 4.0 3.8 3.3 338 chr3R 13604034 intergenic not near genes chr3R 13604203 intergenic not near genes chr3R 13604372 intergenic not near genes chr3R_16_13600001 chr3R_13600001 RAL-409_125b 2334 chr3R 13606691 13606724 chr3R 13606852 13606921 5 190 3.5 2.0 2.8 1.3 230 chr3R 13606691 intergenic CG9759 - chr3R 13606806 intergenic CG9759 - chr3R 13606921 intergenic CG9759 - chr3R_5_13605001 chr3R_13605001 RAL-409_125b 2335 chr3R 13625651 13625710 chr3R 13625777 13625841 9 130 6.0 4.0 5.0 1.5 190 chr3R 13625651 intergenic not near genes chr3R 13625746 intergenic not near genes chr3R 13625841 intergenic not near genes chr3R_9_13625001 chr3R_13625001 RAL-409_125b 2336 chr3R 13659742 13659846 chr3R 13659929 13659984 5 159 0.0 0.0 0.0 5.0 242 chr3R 13659742 intron Hrb87F - chr3R 13659863 intron Hrb87F - chr3R 13659984 intron Hrb87F - chr3R_5_13655001 chr3R_13655001 RAL-409_125b 2337 chr3R 13693028 13693028 chr3R 21907534 21907536 7 8214507 21.0 18.5 19.8 0.3 8214508 chr3R 13693028 3` UTR flfl + chr3R 17800282 exon CG17803 - chr3R 21907536 intergenic CG6678 + chr3R_7_17800001 chr3R_17800001 RAL-409_125b 2338 chr3R 13745394 13745442 chr3R 13745552 13745610 4 164 8.0 3.0 5.5 0.6 216 chr3R 13745394 intron CG34383 + chr3R 13745502 intron CG34383 + chr3R 13745610 intron CG34383 + chr3R_4_13745001 chr3R_13745001 RAL-409_125b 2339 chr3R 13782015 13782077 chr3R 13782139 13782202 13 128 5.0 5.5 5.2 2.1 187 chr3R 13782015 exon CG9286 + chr3R 13782108 intergenic CG9286 +,Dip-B + chr3R 13782202 intergenic Dip-B +,CG9286 + chr3R_13_13780001 chr3R_13780001 RAL-409_125b 2340 chr3R 13850268 13850339 chr3R 13850406 13850477 16 138 1.0 5.0 3.0 4.0 209 chr3R 13850268 intergenic not near genes chr3R 13850372 intergenic not near genes chr3R 13850477 intergenic not near genes chr3R_16_13850001 chr3R_13850001 RAL-409_125b 2341 chr3R 13880523 13880576 chr3R 13880669 13880720 10 151 5.0 6.0 5.5 1.5 197 chr3R 13880523 intergenic not near genes chr3R 13880622 intergenic not near genes chr3R 13880720 intergenic not near genes chr3R_10_13880001 chr3R_13880001 RAL-409_125b 2342 chr3R 13896764 13896819 chr3R 13896957 13897015 8 199 7.5 8.0 7.8 0.9 251 chr3R 13896764 intergenic not near genes chr3R 13896890 intergenic not near genes chr3R 13897015 intergenic not near genes chr3R_8_13895001 chr3R_13895001 RAL-409_125b 2343 chr3R 13909878 13909908 chr3R 13910006 13910036 4 123 7.5 12.0 9.8 0.4 158 chr3R 13909878 intergenic not near genes chr3R 13909957 intergenic not near genes chr3R 13910036 intergenic not near genes chr3R_4_13905001 chr3R_13905001 RAL-409_125b 2344 chr3R 13915697 13915712 chr3R 13916069 13916104 4 384 14.5 17.5 16.0 0.2 407 chr3R 13915697 intergenic not near genes chr3R 13915900 intergenic not near genes chr3R 13916104 intergenic not near genes chr3R_4_13915001 chr3R_13915001 RAL-409_125b 2345 chr3R 13974471 13974493 chr3R 13974598 13974614 6 126 2.5 6.5 4.5 1.1 143 chr3R 13974471 intron,5` UTR rdx -,CR43460 + chr3R 13974542 intron,5` UTR rdx -,CR43460 + chr3R 13974614 intron,5` UTR rdx -,CR43460 + chr3R_6_13970001 chr3R_13970001 RAL-409_125b 2346 chr3R 13975338 13975401 chr3R 13975458 13975531 12 127 6.5 4.5 5.5 1.8 193 chr3R 13975338 intron rdx - chr3R 13975434 intron rdx - chr3R 13975531 intron rdx - chr3R_12_13975001 chr3R_13975001 RAL-409_125b 2347 chr3R 14037556 14037589 chr3R 14037664 14037718 8 115 10.5 9.5 10.0 0.7 162 chr3R 14037556 intergenic not near genes chr3R 14037637 intergenic not near genes chr3R 14037718 intergenic not near genes chr3R_8_14035001 chr3R_14035001 RAL-409_125b 2348 chr3R 14058096 14058128 chr3R 14058266 14058290 4 165 13.5 3.5 8.5 0.4 194 chr3R 14058096 5` UTR foxo + chr3R 14058193 intron foxo + chr3R 14058290 intron foxo + chr3R_4_14055001 chr3R_14055001 RAL-409_125b 2349 chr3R 14079794 14079840 chr3R 14079926 14079972 4 132 2.0 2.0 2.0 1.3 178 chr3R 14079794 intron foxo + chr3R 14079883 intron foxo + chr3R 14079972 intron foxo + chr3R_4_14075001 chr3R_14075001 RAL-409_125b 2350 chr3R 14089533 14089540 chr3R 14089671 14089678 4 138 3.0 0.0 1.5 1.6 145 chr3R 14089533 5` UTR Npc2b + chr3R 14089606 intron Npc2b + chr3R 14089678 intron Npc2b + chr3R_4_14085001 chr3R_14085001 RAL-409_125b 2351 chr3R 14091471 14091536 chr3R 14091592 14091660 13 128 6.0 2.5 4.2 2.5 189 chr3R 14091471 intron Npc2b + chr3R 14091566 intron Npc2b + chr3R 14091660 intron Npc2b + chr3R_13_14090001 chr3R_14090001 RAL-409_125b 2352 chr3R 14180779 14180843 chr3R 14185589 14185658 F-element 10 4814 7.5 7.5 7.5 1.2 4879 chr3R 14180779 intron Dop1R1 - chr3R 14183218 intron Dop1R1 - chr3R 14185658 intron Dop1R1 - chr3R_10_14180001 chr3R_14180001 RAL-409_125b 2353 chr3R 14194387 14194452 chr3R 14203585 14203651 roo 14 9196 4.0 4.5 4.2 2.7 9264 chr3R 14194387 intron Dop1R1 - chr3R 14199019 intron Dop1R1 - chr3R 14203651 intron Dop1R1 - chr3R_14_14195001 chr3R_14195001 RAL-409_125b 2354 chr3R 14246371 14246408 chr3R 14247893 14247949 jockey 9 1527 7.5 5.5 6.5 1.2 1578 chr3R 14246371 intergenic not near genes chr3R 14247160 intergenic not near genes chr3R 14247949 intergenic not near genes chr3R_9_14245001 chr3R_14245001 RAL-409_125b 2355 chr3R 14255170 14255227 chr3R 14256394 14256410 6 1197 36.5 31.5 34.0 0.2 1240 chr3R 14255170 intron Aats-met - chr3R 14255790 intron Aats-met - chr3R 14256410 intron,intron Aats-met -,CG43179 + chr3R_6_14255001 chr3R_14255001 RAL-409_125b 2356 chr3R 14256754 14256763 chr3R 14256875 14256899 5 128 5.5 7.5 6.5 0.7 145 chr3R 14256754 intron,3` UTR Aats-met -,CG43179 + chr3R 14256826 intron,3` UTR Aats-met -,CG43179 + chr3R 14256899 intron,3` UTR Aats-met -,CG43179 + chr3R_5_14255001 chr3R_14255001 RAL-409_125b 2357 chr3R 14308786 14308828 chr3R 14308988 14309030 7 198 4.5 3.5 4.0 1.4 244 chr3R 14308786 intergenic su(Hw) -,RpII15 + chr3R 14308908 intergenic RpII15 +,su(Hw) - chr3R 14309030 intergenic RpII15 +,su(Hw) - chr3R_7_14305001 chr3R_14305001 RAL-409_125b 2358 chr3R 14327651 14327723 chr3R 14327783 14327855 12 128 7.0 6.0 6.5 1.6 204 chr3R 14327651 3` UTR CG3321 + chr3R 14327753 intergenic CG3321 +,spn-B + chr3R 14327855 intergenic CG3321 +,spn-B + chr3R_12_14325001 chr3R_14325001 RAL-409_125b 2359 chr3R 14361108 14361172 chr3R 14361285 14361346 9 175 7.0 3.0 5.0 1.5 238 chr3R 14361108 intron,exon NK7.1 -,CG31320 - chr3R 14361227 intron,5` UTR NK7.1 -,CG31320 - chr3R 14361346 intron,5` UTR NK7.1 -,CG31320 - chr3R_9_14360001 chr3R_14360001 RAL-409_125b 2360 chr3R 14527351 14527413 chr3R 14527478 14527540 11 120 7.0 6.5 6.8 1.4 189 chr3R 14527351 intron Pde6 - chr3R 14527446 intron Pde6 - chr3R 14527540 intron Pde6 - chr3R_11_14525001 chr3R_14525001 RAL-409_125b 2361 chr3R 14538702 14538771 chr3R 14538838 14538904 7 132 6.0 5.0 5.5 1.1 202 chr3R 14538702 intron Pde6 - chr3R 14538803 intron Pde6 - chr3R 14538904 intron Pde6 - chr3R_7_14535001 chr3R_14535001 RAL-409_125b 2362 chr3R 14543565 14543627 chr3R 14543678 14543751 19 127 8.0 5.5 6.8 2.4 186 chr3R 14543565 intron Pde6 - chr3R 14543658 intron Pde6 - chr3R 14543751 intron Pde6 - chr3R_19_14540001 chr3R_14540001 RAL-409_125b 2363 chr3R 14545996 14546057 chr3R 14546123 14546184 9 124 5.5 0.5 3.0 2.2 188 chr3R 14545996 intron Pde6 - chr3R 14546090 intron Pde6 - chr3R 14546184 intron Pde6 - chr3R_9_14545001 chr3R_14545001 RAL-409_125b 2364 chr3R 14592081 14592161 chr3R 14592227 14592292 6 131 1.5 4.5 3.0 1.5 211 chr3R 14592081 intron stumps + chr3R 14592186 intron stumps + chr3R 14592292 exon stumps + chr3R_6_14590001 chr3R_14590001 RAL-409_125b 2365 chr3R 14608770 14608783 chr3R 14608891 14608894 4 118 14.0 9.5 11.8 0.3 124 chr3R 14608770 intergenic not near genes chr3R 14608832 intergenic not near genes chr3R 14608894 intergenic not near genes chr3R_4_14605001 chr3R_14605001 RAL-409_125b 2366 chr3R 14608784 14608819 chr3R 14608880 14608929 8 106 6.5 10.0 8.2 0.9 145 chr3R 14608784 intergenic not near genes chr3R 14608856 intergenic not near genes chr3R 14608929 intergenic not near genes chr3R_8_14605001 chr3R_14605001 RAL-409_125b 2367 chr3R 14689575 14689585 chr3R 14689710 14689713 4 133 13.5 11.0 12.2 0.3 138 chr3R 14689575 intron Meltrin - chr3R 14689644 intron Meltrin - chr3R 14689713 intron Meltrin - chr3R_4_14685001 chr3R_14685001 RAL-409_125b 2368 chr3R 14704353 14704410 chr3R 14704468 14704513 14 119 2.5 5.0 3.8 2.9 160 chr3R 14704353 intron kibra - chr3R 14704433 intron kibra - chr3R 14704513 intron kibra - chr3R_14_14700001 chr3R_14700001 RAL-409_125b 2369 chr3R 14718269 14718307 chr3R 14718659 14718715 8 404 1.5 7.0 4.2 1.5 446 chr3R 14718269 intron kibra - chr3R 14718492 intron kibra - chr3R 14718715 intron kibra - chr3R_8_14715001 chr3R_14715001 RAL-409_125b 2370 chr3R 14728202 14728270 chr3R 14728355 14728423 14 153 3.5 7.0 5.2 2.3 221 chr3R 14728202 intron CG7530 - chr3R 14728312 intron CG7530 - chr3R 14728423 intron CG7530 - chr3R_14_14725001 chr3R_14725001 RAL-409_125b 2371 chr3R 14787086 14787133 chr3R 14787547 14787577 11 456 11.5 5.0 8.2 1.2 491 chr3R 14787086 intron jvl + chr3R 14787332 intron jvl + chr3R 14787577 intron jvl + chr3R_11_14785001 chr3R_14785001 RAL-409_125b 2372 chr3R 14869829 14869891 chr3R 14869970 14870016 10 138 5.5 7.5 6.5 1.3 187 chr3R 14869829 intron btsz - chr3R 14869922 intron btsz - chr3R 14870016 intron btsz - chr3R_10_14865001 chr3R_14865001 RAL-409_125b 2373 chr3R 14898435 14898479 chr3R 14898605 14898642 5 169 3.0 4.5 3.8 1.0 207 chr3R 14898435 intergenic Nup93-2 -,CG3817 + chr3R 14898538 intergenic Nup93-2 -,CG3817 + chr3R 14898642 intergenic CG3817 +,Nup93-2 - chr3R_5_14895001 chr3R_14895001 RAL-409_125b 2374 chr3R 14943126 14943195 chr3R 14944230 14944304 14 1107 4.5 5.0 4.8 2.4 1178 chr3R 14943126 intergenic not near genes chr3R 14943715 intergenic not near genes chr3R 14944304 intergenic not near genes chr3R_14_14940001 chr3R_14940001 RAL-409_125b 2375 chr3R 14992770 14992834 chr3R 14992966 14993040 11 197 6.0 6.0 6.0 1.6 270 chr3R 14992770 intergenic not near genes chr3R 14992905 intergenic not near genes chr3R 14993040 intergenic not near genes chr3R_11_14990001 chr3R_14990001 RAL-409_125b 2376 chr3R 15026288 15026329 chr3R 15026424 15026465 11 136 4.0 3.5 3.8 2.3 177 chr3R 15026288 intergenic not near genes chr3R 15026376 intergenic not near genes chr3R 15026465 intergenic not near genes chr3R_11_15025001 chr3R_15025001 RAL-409_125b 2377 chr3R 15041366 15041407 chr3R 15045200 15045241 Doc 4 3834 0.0 3.0 1.5 1.6 3875 chr3R 15041366 intergenic not near genes chr3R 15043304 intergenic not near genes chr3R 15045241 intergenic not near genes chr3R_4_15040001 chr3R_15040001 RAL-409_125b 2378 chr3R 15061001 15061032 chr3R 15061132 15061163 9 130 8.0 7.5 7.8 1.0 162 chr3R 15061001 intron dpr9 - chr3R 15061082 intron dpr9 - chr3R 15061163 intron dpr9 - chr3R_9_15060001 chr3R_15060001 RAL-409_125b 2379 chr3R 15075824 15075879 chr3R 15075951 15076001 14 120 5.5 1.5 3.5 3.1 177 chr3R 15075824 intron dpr9 - chr3R 15075912 intron dpr9 - chr3R 15076001 intron dpr9 - chr3R_14_15075001 chr3R_15075001 RAL-409_125b 2380 chr3R 15079764 15079828 chr3R 15080055 15080112 pogo 11 290 9.0 0.0 4.5 2.0 348 chr3R 15079764 3` UTR CG6966 - chr3R 15079938 3` UTR CG6966 - chr3R 15080112 3` UTR CG6966 - chr3R_11_15075001 chr3R_15075001 RAL-409_125b 2381 chr3R 15088091 15088104 chr3R 15088224 15088225 7 139 3.0 6.0 4.5 1.3 134 chr3R 15088091 intron CG6966 - chr3R 15088158 intron CG6966 - chr3R 15088225 intron CG6966 - chr3R_7_15085001 chr3R_15085001 RAL-409_125b 2382 chr3R 15102419 15102486 chr3R 15109783 15109813 412 12 7359 4.5 5.0 4.8 2.1 7394 chr3R 15102419 intron CG42788 - chr3R 15106116 intron CG42788 - chr3R 15109813 intron CG42788 - chr3R_12_15105001 chr3R_15105001 RAL-409_125b 2383 chr3R 15127744 15127806 chr3R 15127874 15127936 12 129 4.0 5.0 4.5 2.2 192 chr3R 15127744 intron CG42788 - chr3R 15127840 intron CG42788 - chr3R 15127936 intron CG42788 - chr3R_12_15125001 chr3R_15125001 RAL-409_125b 2384 chr3R 15132041 15132065 chr3R 15135141 15135175 Juan 9 3108 5.0 10.5 7.8 1.0 3134 chr3R 15132041 intergenic CG42788 - chr3R 15133608 intergenic not near genes chr3R 15135175 3` UTR CG6912 - chr3R_9_15130001 chr3R_15130001 RAL-409_125b 2385 chr3R 15162516 15162563 chr3R 15167319 15167371 F-element 7 4814 0.0 4.0 2.0 2.3 4855 chr3R 15162516 intron Gyc88E + chr3R 15164944 intron Gyc88E + chr3R 15167371 intron Gyc88E + chr3R_7_15160001 chr3R_15160001 RAL-409_125b 2386 chr3R 15286987 15286987 chr3R 21907535 21907536 4 6620548 18.5 19.0 18.8 0.2 6620549 chr3R 15286987 intron Tm1 + chr3R 18597262 intron,exon qin +,CG14304 - chr3R 21907536 intergenic CG6678 + chr3R_4_18595001 chr3R_18595001 RAL-409_125b 2387 chr3R 15416215 15416269 chr3R 15416345 15416399 10 129 7.5 9.0 8.2 1.1 184 chr3R 15416215 3` UTR Atx2 + chr3R 15416307 3` UTR Atx2 + chr3R 15416399 3` UTR Atx2 + chr3R_10_15415001 chr3R_15415001 RAL-409_125b 2388 chr3R 15445863 15445902 chr3R 15445998 15446032 10 134 8.0 0.0 4.0 2.0 169 chr3R 15445863 exon AdamTS-A - chr3R 15445948 intron AdamTS-A - chr3R 15446032 intron AdamTS-A - chr3R_10_15445001 chr3R_15445001 RAL-409_125b 2389 chr3R 15571202 15571497 chr3R 15571359 15571627 38 143 10.5 12.0 11.2 3.1 425 chr3R 15571202 intergenic not near genes chr3R 15571414 intergenic not near genes chr3R 15571627 intergenic not near genes chr3R_38_15570001 chr3R_15570001 RAL-409_125b 2390 chr3R 15601132 15601189 chr3R 15608704 15608750 412 11 7568 4.0 11.0 7.5 1.3 7618 chr3R 15601132 intergenic not near genes chr3R 15604941 intergenic not near genes chr3R 15608750 intergenic not near genes chr3R_11_15600001 chr3R_15600001 RAL-409_125b 2391 chr3R 15610511 15610585 chr3R 15610637 15610699 7 123 4.0 2.0 3.0 1.8 188 chr3R 15610511 intergenic not near genes chr3R 15610605 intergenic not near genes chr3R 15610699 intergenic not near genes chr3R_7_15610001 chr3R_15610001 RAL-409_125b 2392 chr3R 15618710 15618763 chr3R 15626229 15626287 blood 10 7516 3.0 4.0 3.5 2.2 7577 chr3R 15618710 intergenic not near genes chr3R 15622498 intergenic not near genes chr3R 15626287 intergenic not near genes chr3R_10_15620001 chr3R_15620001 RAL-409_125b 2393 chr3R 15639303 15639352 chr3R 15639625 15639678 13 328 3.0 2.5 2.8 3.4 375 chr3R 15639303 intergenic not near genes chr3R 15639490 intergenic not near genes chr3R 15639678 intergenic not near genes chr3R_13_15635001 chr3R_15635001 RAL-409_125b 2394 chr3R 15691138 15691316 chr3R 15691285 15691441 6 143 0.0 0.0 0.0 6.0 303 chr3R 15691138 intergenic not near genes chr3R 15691290 intergenic not near genes chr3R 15691441 intergenic not near genes chr3R_6_15690001 chr3R_15690001 RAL-409_125b 2395 chr3R 15708270 15708282 chr3R 15708419 15708424 4 146 2.0 6.0 4.0 0.8 154 chr3R 15708270 3` UTR CG5404 + chr3R 15708347 3` UTR CG5404 + chr3R 15708424 3` UTR CG5404 + chr3R_4_15705001 chr3R_15705001 RAL-409_125b 2396 chr3R 15711231 15711275 chr3R 15711360 15711398 11 125 5.0 2.5 3.8 2.3 167 chr3R 15711231 intergenic not near genes chr3R 15711314 intergenic not near genes chr3R 15711398 intergenic not near genes chr3R_11_15710001 chr3R_15710001 RAL-409_125b 2397 chr3R 15718377 15718446 chr3R 15724757 15724817 10 6376 18.5 19.5 19.0 0.5 6440 chr3R 15718377 intergenic not near genes chr3R 15721597 intergenic not near genes chr3R 15724817 intergenic not near genes chr3R_10_15720001 chr3R_15720001 RAL-409_125b 2398 chr3R 15735207 15735232 chr3R 15739962 15740002 F-element 5 4766 8.0 3.0 5.5 0.8 4795 chr3R 15735207 intergenic not near genes chr3R 15737604 intergenic not near genes chr3R 15740002 intergenic not near genes chr3R_5_15735001 chr3R_15735001 RAL-409_125b 2399 chr3R 15864209 15864441 chr3R 15864346 15864571 10 122 7.0 11.5 9.2 1.0 362 chr3R 15864209 intron CG31183 - chr3R 15864390 intron CG31183 - chr3R 15864571 intron CG31183 - chr3R_10_15860001 chr3R_15860001 RAL-409_125b 2400 chr3R 15868904 15868926 chr3R 15869032 15869054 6 128 13.0 1.0 7.0 0.8 150 chr3R 15868904 intron CG31183 - chr3R 15868979 intron CG31183 - chr3R 15869054 intron CG31183 - chr3R_6_15865001 chr3R_15865001 RAL-409_125b 2401 chr3R 15878046 15878100 chr3R 15878183 15878238 11 137 5.0 8.0 6.5 1.5 192 chr3R 15878046 intergenic not near genes chr3R 15878142 intergenic not near genes chr3R 15878238 intergenic not near genes chr3R_11_15875001 chr3R_15875001 RAL-409_125b 2402 chr3R 15924875 15924955 chr3R 15925013 15925088 5 136 9.0 7.0 8.0 0.6 213 chr3R 15924875 intron CG4221 + chr3R 15924982 intron CG4221 + chr3R 15925088 intron CG4221 + chr3R_5_15920001 chr3R_15920001 RAL-409_125b 2403 chr3R 16048833 16048882 chr3R 16048943 16049005 9 125 5.0 7.0 6.0 1.3 172 chr3R 16048833 intron ird5 - chr3R 16048919 intron ird5 - chr3R 16049005 intron ird5 - chr3R_9_16045001 chr3R_16045001 RAL-409_125b 2404 chr3R 16225039 16225109 chr3R 16225174 16225244 24 132 4.0 0.0 2.0 8.0 205 chr3R 16225039 intergenic not near genes chr3R 16225142 intergenic not near genes chr3R 16225244 intergenic tara + chr3R_24_16225001 chr3R_16225001 RAL-409_125b 2405 chr3R 16226762 16226774 chr3R 16226889 16226902 4 126 7.0 7.0 7.0 0.5 140 chr3R 16226762 intron tara + chr3R 16226832 intron tara + chr3R 16226902 intron tara + chr3R_4_16225001 chr3R_16225001 RAL-409_125b 2406 chr3R 16246474 16246556 chr3R 16246600 16246641 4 113 4.5 6.0 5.2 0.6 167 chr3R 16246474 intron tara + chr3R 16246558 intron tara + chr3R 16246641 intron tara + chr3R_4_16245001 chr3R_16245001 RAL-409_125b 2407 chr3R 16253490 16253568 chr3R 16253626 16253703 8 136 2.0 1.0 1.5 3.2 213 chr3R 16253490 intron tara + chr3R 16253596 intron tara + chr3R 16253703 intron tara + chr3R_8_16250001 chr3R_16250001 RAL-409_125b 2408 chr3R 16374268 16374324 chr3R 16374435 16374491 13 165 3.0 8.0 5.5 2.0 223 chr3R 16374268 intergenic ss - chr3R 16374380 intergenic ss - chr3R 16374491 3` UTR ss - chr3R_13_16370001 chr3R_16370001 RAL-409_125b 2409 chr3R 16464482 16464531 chr3R 16464699 16464748 13 226 7.0 8.5 7.8 1.5 266 chr3R 16464482 exon CG42232 - chr3R 16464615 exon CG42232 - chr3R 16464748 exon CG42232 - chr3R_13_16460001 chr3R_16460001 RAL-409_125b 2410 chr3R 16472559 16472593 chr3R 16472665 16472694 5 101 10.5 11.0 10.8 0.4 135 chr3R 16472559 intergenic Gyc-89Da + chr3R 16472626 5` UTR Gyc-89Da + chr3R 16472694 5` UTR Gyc-89Da + chr3R_5_16470001 chr3R_16470001 RAL-409_125b 2411 chr3R 16508118 16508185 chr3R 16508247 16508321 19 131 6.5 9.0 7.8 2.2 203 chr3R 16508118 intron CG42342 + chr3R 16508220 intron CG42342 + chr3R 16508321 intron CG42342 + chr3R_19_16505001 chr3R_16505001 RAL-409_125b 2412 chr3R 16512739 16512770 chr3R 16512890 16512911 7 148 2.5 8.5 5.5 1.1 172 chr3R 16512739 intron CG42342 + chr3R 16512825 intron CG42342 + chr3R 16512911 intron CG42342 + chr3R_7_16510001 chr3R_16510001 RAL-409_125b 2413 chr3R 16582869 16582914 chr3R 16582986 16583016 12 118 5.0 2.5 3.8 2.5 147 chr3R 16582869 intron Scp2 - chr3R 16582942 intron Scp2 - chr3R 16583016 intron Scp2 - chr3R_12_16580001 chr3R_16580001 RAL-409_125b 2414 chr3R 16617161 16617214 chr3R 16617297 16617331 10 115 7.5 6.0 6.8 1.3 170 chr3R 16617161 intergenic CG17562 + chr3R 16617246 intergenic CG17562 + chr3R 16617331 intergenic CG17562 + chr3R_10_16615001 chr3R_16615001 RAL-409_125b 2415 chr3R 16617215 16617221 chr3R 16617295 16617357 5 114 7.0 6.0 6.5 0.7 142 chr3R 16617215 intergenic CG17562 + chr3R 16617286 intergenic CG17562 + chr3R 16617357 intergenic CG17562 + chr3R_5_16615001 chr3R_16615001 RAL-409_125b 2416 chr3R 16756282 16756306 chr3R 16762517 16762547 diver 9 6237 4.0 2.5 3.2 2.1 6265 chr3R 16756282 intron bxd - chr3R 16759414 intron bxd - chr3R 16762547 intron bxd - chr3R_9_16755001 chr3R_16755001 RAL-409_125b 2417 chr3R 16756307 16756313 chr3R 16762511 16762547 diver 4 6220 3.5 2.5 3.0 1.0 6240 chr3R 16756307 intron bxd - chr3R 16759427 intron bxd - chr3R 16762547 intron bxd - chr3R_4_16755001 chr3R_16755001 RAL-409_125b 2418 chr3R 16921793 16921816 chr3R 16921927 16921934 4 127 18.0 18.0 18.0 0.2 141 chr3R 16921793 intron iab-8 - chr3R 16921864 intron iab-8 - chr3R 16921934 intron iab-8 - chr3R_4_16920001 chr3R_16920001 RAL-409_125b 2419 chr3R 17101093 17101129 chr3R 17101223 17101259 5 129 2.0 0.0 1.0 2.5 166 chr3R 17101093 intron cher - chr3R 17101176 intron cher - chr3R 17101259 intron cher - chr3R_5_17100001 chr3R_17100001 RAL-409_125b 2420 chr3R 17163430 17163493 chr3R 17163561 17163617 9 129 4.5 3.5 4.0 1.8 187 chr3R 17163430 intron Mur89F - chr3R 17163524 intron Mur89F - chr3R 17163617 intron Mur89F - chr3R_9_17160001 chr3R_17160001 RAL-409_125b 2421 chr3R 17176240 17176262 chr3R 17176376 17176391 5 134 13.5 6.0 9.8 0.5 151 chr3R 17176240 intron Mur89F - chr3R 17176316 intron Mur89F - chr3R 17176391 intron Mur89F - chr3R_5_17175001 chr3R_17175001 RAL-409_125b 2422 chr3R 17294635 17294658 chr3R 17295113 17295136 BS 4 476 13.5 8.0 10.8 0.3 501 chr3R 17294635 intergenic not near genes chr3R 17294886 intergenic not near genes chr3R 17295136 intergenic not near genes chr3R_4_17290001 chr3R_17290001 RAL-409_125b 2423 chr3R 17294670 17294680 chr3R 17295107 17295158 BS 6 471 8.5 6.5 7.5 0.7 488 chr3R 17294670 intergenic not near genes chr3R 17294914 intergenic not near genes chr3R 17295158 intergenic not near genes chr3R_6_17290001 chr3R_17290001 RAL-409_125b 2424 chr3R 17312783 17312847 chr3R 17312908 17312976 17 124 5.5 7.5 6.5 2.3 193 chr3R 17312783 intergenic not near genes chr3R 17312880 intergenic not near genes chr3R 17312976 intergenic not near genes chr3R_17_17310001 chr3R_17310001 RAL-409_125b 2425 chr3R 17335117 17335181 chr3R 17335243 17335297 9 114 6.5 5.5 6.0 1.3 180 chr3R 17335117 intron beat-IIa - chr3R 17335207 intron beat-IIa - chr3R 17335297 intron beat-IIa - chr3R_9_17335001 chr3R_17335001 RAL-409_125b 2426 chr3R 17346662 17346710 chr3R 17348275 17348322 F-element 13 1613 3.5 7.5 5.5 2.0 1660 chr3R 17346662 intron beat-IIa - chr3R 17347492 intron beat-IIa - chr3R 17348322 intron beat-IIa - chr3R_13_17345001 chr3R_17345001 RAL-409_125b 2427 chr3R 17355452 17355519 chr3R 17355572 17355639 16 119 5.5 6.0 5.8 2.4 187 chr3R 17355452 intron beat-IIa - chr3R 17355546 intron beat-IIa - chr3R 17355639 intron beat-IIa - chr3R_16_17355001 chr3R_17355001 RAL-409_125b 2428 chr3R 17360112 17360177 chr3R 17360244 17360309 13 131 4.0 5.0 4.5 2.4 197 chr3R 17360112 intron beat-IIa - chr3R 17360210 intron beat-IIa - chr3R 17360309 intron beat-IIa - chr3R_13_17360001 chr3R_17360001 RAL-409_125b 2429 chr3R 17361769 17361821 chr3R 17361941 17362005 6 168 8.0 5.0 6.5 0.8 236 chr3R 17361769 intron beat-IIa - chr3R 17361887 intron beat-IIa - chr3R 17362005 intron beat-IIa - chr3R_6_17360001 chr3R_17360001 RAL-409_125b 2430 chr3R 17461161 17461225 chr3R 17461287 17461322 13 127 2.5 3.0 2.8 3.4 161 chr3R 17461161 intergenic not near genes chr3R 17461242 intergenic not near genes chr3R 17461322 intergenic not near genes chr3R_13_17460001 chr3R_17460001 RAL-409_125b 2431 chr3R 17492178 17492218 chr3R 17492292 17492351 13 128 7.0 10.0 8.5 1.4 173 chr3R 17492178 exon Dscam3 - chr3R 17492264 intron Dscam3 - chr3R 17492351 intron Dscam3 - chr3R_13_17490001 chr3R_17490001 RAL-409_125b 2432 chr3R 17497919 17497985 chr3R 17498055 17498121 15 135 5.0 6.5 5.8 2.2 202 chr3R 17497919 intron Dscam3 - chr3R 17498020 intron Dscam3 - chr3R 17498121 intron Dscam3 - chr3R_15_17495001 chr3R_17495001 RAL-409_125b 2433 chr3R 17506317 17506391 chr3R 17506440 17506514 11 127 2.5 5.0 3.8 2.3 197 chr3R 17506317 intergenic not near genes chr3R 17506416 intergenic not near genes chr3R 17506514 intergenic not near genes chr3R_11_17505001 chr3R_17505001 RAL-409_125b 2434 chr3R 17521511 17521589 chr3R 17521718 17521777 5 190 3.5 7.0 5.2 0.8 266 chr3R 17521511 intergenic not near genes chr3R 17521644 intergenic not near genes chr3R 17521777 intergenic not near genes chr3R_5_17520001 chr3R_17520001 RAL-409_125b 2435 chr3R 17522177 17522198 chr3R 17522309 17522321 4 130 12.5 0.5 6.5 0.5 144 chr3R 17522177 intergenic not near genes chr3R 17522249 intergenic not near genes chr3R 17522321 intergenic not near genes chr3R_4_17520001 chr3R_17520001 RAL-409_125b 2436 chr3R 17524866 17524926 chr3R 17524994 17525056 4 125 0.0 3.0 1.5 1.6 190 chr3R 17524866 intergenic not near genes chr3R 17524961 intergenic not near genes chr3R 17525056 intergenic not near genes chr3R_4_17520001 chr3R_17520001 RAL-409_125b 2437 chr3R 17587190 17587232 chr3R 17587397 17587460 9 225 8.0 10.0 9.0 0.9 270 chr3R 17587190 intergenic not near genes chr3R 17587325 intergenic not near genes chr3R 17587460 intergenic not near genes chr3R_9_17585001 chr3R_17585001 RAL-409_125b 2438 chr3R 17591260 17591300 chr3R 17591724 17591780 F-element 12 472 5.5 2.5 4.0 2.4 520 chr3R 17591260 intergenic not near genes chr3R 17591520 intergenic not near genes chr3R 17591780 intergenic not near genes chr3R_12_17590001 chr3R_17590001 RAL-409_125b 2439 chr3R 17638283 17638339 chr3R 17638819 17638869 roo 17 535 5.5 7.5 6.5 2.3 586 chr3R 17638283 intron CG43175 + chr3R 17638576 intron CG43175 + chr3R 17638869 intron,intron CG43175 +,CR45222 + chr3R_17_17635001 chr3R_17635001 RAL-409_125b 2440 chr3R 17647201 17647264 chr3R 17647343 17647373 17 143 8.5 4.5 6.5 2.3 172 chr3R 17647201 intergenic CG14322 + chr3R 17647287 intergenic CG14322 + chr3R 17647373 intergenic CG14322 + chr3R_17_17645001 chr3R_17645001 RAL-409_125b 2441 chr3R 17702518 17702585 chr3R 17702678 17702750 12 164 2.0 2.5 2.2 3.8 232 chr3R 17702518 intron osa - chr3R 17702634 intron osa - chr3R 17702750 intron osa - chr3R_12_17700001 chr3R_17700001 RAL-409_125b 2442 chr3R 17734090 17734132 chr3R 17734219 17734271 7 130 7.5 4.0 5.8 1.0 181 chr3R 17734090 3` UTR CG14321 + chr3R 17734180 3` UTR CG14321 + chr3R 17734271 3` UTR CG14321 + chr3R_7_17730001 chr3R_17730001 RAL-409_125b 2443 chr3R 17734802 17734859 chr3R 17734965 17735022 12 163 3.0 0.5 1.8 4.3 220 chr3R 17734802 intergenic CG14321 + chr3R 17734912 intergenic not near genes chr3R 17735022 intergenic not near genes chr3R_12_17730001 chr3R_17730001 RAL-409_125b 2444 chr3R 17749018 17749082 chr3R 17749144 17749202 6 110 3.5 0.5 2.0 2.0 184 chr3R 17749018 intergenic not near genes chr3R 17749110 intergenic not near genes chr3R 17749202 intergenic not near genes chr3R_6_17745001 chr3R_17745001 RAL-409_125b 2445 chr3R 17773343 17773391 chr3R 17773472 17773521 15 128 3.5 5.5 4.5 2.7 178 chr3R 17773343 exon CG43102 - chr3R 17773432 intron CG43102 - chr3R 17773521 exon CG43102 - chr3R_15_17770001 chr3R_17770001 RAL-409_125b 2446 chr3R 17823167 17823194 chr3R 17823288 17823312 5 124 8.5 3.0 5.8 0.7 145 chr3R 17823167 intron tinc + chr3R 17823240 intron tinc + chr3R 17823312 intron tinc + chr3R_5_17820001 chr3R_17820001 RAL-409_125b 2447 chr3R 17823200 17823232 chr3R 17823284 17823367 5 124 3.5 3.0 3.2 1.2 167 chr3R 17823200 intron tinc + chr3R 17823284 intron tinc + chr3R 17823367 intron tinc + chr3R_5_17820001 chr3R_17820001 RAL-409_125b 2448 chr3R 17851698 17851752 chr3R 17851902 17851963 4 207 0.0 1.0 0.5 2.7 265 chr3R 17851698 intron tinc + chr3R 17851830 intron tinc + chr3R 17851963 intron tinc + chr3R_4_17850001 chr3R_17850001 RAL-409_125b 2449 chr3R 17856009 17856047 chr3R 17856143 17856197 6 139 7.5 3.5 5.5 0.9 188 chr3R 17856009 intron tinc + chr3R 17856103 intron tinc + chr3R 17856197 intron tinc + chr3R_6_17855001 chr3R_17855001 RAL-409_125b 2450 chr3R 17886858 17886906 chr3R 17886971 17887034 6 123 8.0 6.5 7.2 0.7 176 chr3R 17886858 intron Rim - chr3R 17886946 intron Rim - chr3R 17887034 intron Rim - chr3R_6_17885001 chr3R_17885001 RAL-409_125b 2451 chr3R 17898324 17898352 chr3R 17898454 17898484 8 125 5.0 12.0 8.5 0.8 160 chr3R 17898324 intron Rim - chr3R 17898404 intron Rim - chr3R 17898484 intron Rim - chr3R_8_17895001 chr3R_17895001 RAL-409_125b 2452 chr3R 17899044 17899055 chr3R 17899172 17899183 5 128 3.5 3.5 3.5 1.1 139 chr3R 17899044 intron Rim - chr3R 17899114 intron Rim - chr3R 17899183 intron Rim - chr3R_5_17895001 chr3R_17895001 RAL-409_125b 2453 chr3R 17913078 17913110 chr3R 17913223 17913255 7 140 1.5 6.5 4.0 1.4 177 chr3R 17913078 intron Rim - chr3R 17913166 intron Rim - chr3R 17913255 intron Rim - chr3R_7_17910001 chr3R_17910001 RAL-409_125b 2454 chr3R 17925816 17925824 chr3R 17927328 17927335 hobo 4 1512 8.0 6.5 7.2 0.5 1519 chr3R 17925816 intron cpo + chr3R 17926576 intron cpo + chr3R 17927335 intron cpo + chr3R_4_17925001 chr3R_17925001 RAL-409_125b 2455 chr3R 17925825 17925860 chr3R 17927326 17927339 hobo 6 1505 5.5 6.5 6.0 0.9 1514 chr3R 17925825 intron cpo + chr3R 17926582 intron cpo + chr3R 17927339 intron cpo + chr3R_6_17925001 chr3R_17925001 RAL-409_125b 2456 chr3R 17949751 17949813 chr3R 17949871 17949921 11 118 7.0 8.0 7.5 1.3 170 chr3R 17949751 intron cpo + chr3R 17949836 intron cpo + chr3R 17949921 intron cpo + chr3R_11_17945001 chr3R_17945001 RAL-409_125b 2457 chr3R 18002996 18003032 chr3R 18003135 18003136 7 134 4.5 0.5 2.5 2.0 140 chr3R 18002996 intron cpo + chr3R 18003066 intron cpo + chr3R 18003136 intron cpo + chr3R_7_18000001 chr3R_18000001 RAL-409_125b 2458 chr3R 18030442 18030480 chr3R 18030576 18030614 7 134 2.0 2.0 2.0 2.3 172 chr3R 18030442 intergenic not near genes chr3R 18030528 intergenic not near genes chr3R 18030614 intergenic not near genes chr3R_7_18030001 chr3R_18030001 RAL-409_125b 2459 chr3R 18032735 18032805 chr3R 18040453 18040523 opus 10 7717 2.0 2.0 2.0 3.3 7788 chr3R 18032735 intergenic not near genes chr3R 18036629 intergenic not near genes chr3R 18040523 intergenic not near genes chr3R_10_18035001 chr3R_18035001 RAL-409_125b 2460 chr3R 18041710 18041743 chr3R 18041837 18041854 4 123 2.0 0.5 1.2 1.8 144 chr3R 18041710 intergenic not near genes chr3R 18041782 intergenic not near genes chr3R 18041854 intergenic not near genes chr3R_4_18040001 chr3R_18040001 RAL-409_125b 2461 chr3R 18061552 18061583 chr3R 18063170 18063201 F-element 8 1615 7.5 5.5 6.5 1.1 1649 chr3R 18061552 intergenic not near genes chr3R 18062376 intergenic not near genes chr3R 18063201 intergenic not near genes chr3R_8_18060001 chr3R_18060001 RAL-409_125b 2462 chr3R 18065629 18065664 chr3R 18065785 18065825 4 160 1.0 7.5 4.2 0.8 196 chr3R 18065629 intergenic not near genes chr3R 18065727 intergenic not near genes chr3R 18065825 intergenic not near genes chr3R_4_18065001 chr3R_18065001 RAL-409_125b 2463 chr3R 18067930 18068013 chr3R 18068076 18068145 11 139 0.5 7.0 3.8 2.3 215 chr3R 18067930 intergenic not near genes chr3R 18068038 intergenic not near genes chr3R 18068145 intergenic not near genes chr3R_11_18065001 chr3R_18065001 RAL-409_125b 2464 chr3R 18117378 18117404 chr3R 18117498 18117527 4 121 5.5 4.5 5.0 0.7 149 chr3R 18117378 intron sr + chr3R 18117452 intron sr + chr3R 18117527 intron sr + chr3R_4_18115001 chr3R_18115001 RAL-409_125b 2465 chr3R 18119705 18119739 chr3R 18119822 18119866 4 123 2.0 4.5 3.2 1.0 161 chr3R 18119705 intron sr + chr3R 18119786 intron sr + chr3R 18119866 intron sr + chr3R_4_18115001 chr3R_18115001 RAL-409_125b 2466 chr3R 18122844 18122906 chr3R 18122972 18123028 7 124 3.5 6.5 5.0 1.2 184 chr3R 18122844 intron sr + chr3R 18122936 intron sr + chr3R 18123028 intron sr + chr3R_7_18120001 chr3R_18120001 RAL-409_125b 2467 chr3R 18136185 18136227 chr3R 18136349 18136384 5 163 5.5 4.5 5.0 0.8 199 chr3R 18136185 intergenic not near genes chr3R 18136284 intergenic not near genes chr3R 18136384 intergenic not near genes chr3R_5_18135001 chr3R_18135001 RAL-409_125b 2468 chr3R 18157563 18157611 chr3R 18157715 18157769 6 155 1.5 4.5 3.0 1.5 206 chr3R 18157563 intergenic CR45103 + chr3R 18157666 intergenic CR45103 + chr3R 18157769 5` UTR CR45103 + chr3R_6_18155001 chr3R_18155001 RAL-409_125b 2469 chr3R 18320718 18320766 chr3R 18320870 18320942 11 172 6.0 1.0 3.5 2.4 224 chr3R 18320718 intron CG31235 - chr3R 18320830 intron CG31235 - chr3R 18320942 intron CG31235 - chr3R_11_18320001 chr3R_18320001 RAL-409_125b 2470 chr3R 18364340 18364415 chr3R 18364485 18364547 6 137 1.0 4.5 2.8 1.6 207 chr3R 18364340 3` UTR WRNexo - chr3R 18364444 3` UTR WRNexo - chr3R 18364547 3` UTR WRNexo - chr3R_6_18360001 chr3R_18360001 RAL-409_125b 2471 chr3R 18374499 18374537 chr3R 18374603 18374667 9 125 6.5 5.5 6.0 1.3 168 chr3R 18374499 intergenic CR44946 + chr3R 18374583 5` UTR CR44946 + chr3R 18374667 5` UTR CR44946 + chr3R_9_18370001 chr3R_18370001 RAL-409_125b 2472 chr3R 18413421 18413479 chr3R 18413553 18413610 10 131 9.0 7.5 8.2 1.1 189 chr3R 18413421 intergenic not near genes chr3R 18413516 intergenic not near genes chr3R 18413610 intergenic not near genes chr3R_10_18410001 chr3R_18410001 RAL-409_125b 2473 chr3R 18472233 18472293 chr3R 18472384 18472444 13 150 4.0 3.5 3.8 2.7 211 chr3R 18472233 intron fru - chr3R 18472338 intron fru - chr3R 18472444 intron fru - chr3R_13_18470001 chr3R_18470001 RAL-409_125b 2474 chr3R 18481164 18481202 chr3R 18481294 18481336 4 132 0.0 8.0 4.0 0.8 172 chr3R 18481164 intron fru - chr3R 18481250 intron fru - chr3R 18481336 intron fru - chr3R_4_18480001 chr3R_18480001 RAL-409_125b 2475 chr3R 18500705 18500735 chr3R 18500858 18500906 7 167 3.0 6.0 4.5 1.3 201 chr3R 18500705 intron fru - chr3R 18500806 intron fru - chr3R 18500906 intron fru - chr3R_7_18500001 chr3R_18500001 RAL-409_125b 2476 chr3R 18501549 18501609 chr3R 18501680 18501740 11 129 7.0 8.0 7.5 1.3 191 chr3R 18501549 intron fru - chr3R 18501644 intron fru - chr3R 18501740 intron fru - chr3R_11_18500001 chr3R_18500001 RAL-409_125b 2477 chr3R 18528317 18528391 chr3R 18528454 18528528 18 133 5.0 2.0 3.5 4.0 211 chr3R 18528317 intron fru - chr3R 18528422 intron fru - chr3R 18528528 intron fru - chr3R_18_18525001 chr3R_18525001 RAL-409_125b 2478 chr3R 18559392 18559509 chr3R 18559514 18559655 5 130 0.0 0.0 0.0 5.0 263 chr3R 18559392 intergenic CG7691 + chr3R 18559524 intergenic CG7691 + chr3R 18559655 intergenic CG7691 + chr3R_5_18555001 chr3R_18555001 RAL-409_125b 2479 chr3R 18562521 18562567 chr3R 18562690 18562736 7 169 9.0 7.0 8.0 0.8 215 chr3R 18562521 intergenic not near genes chr3R 18562628 intergenic not near genes chr3R 18562736 intergenic not near genes chr3R_7_18560001 chr3R_18560001 RAL-409_125b 2480 chr3R 18606472 18606522 chr3R 18610744 18610798 F-element 16 4277 10.0 10.0 10.0 1.5 4326 chr3R 18606472 intron,intron qin +,CG14304 - chr3R 18608635 intron,intron qin +,CG14304 - chr3R 18610798 intron,intron qin +,CG14304 - chr3R_16_18605001 chr3R_18605001 RAL-409_125b 2481 chr3R 18628860 18628871 chr3R 18629022 18629035 4 166 0.5 2.5 1.5 1.6 175 chr3R 18628860 intron qin + chr3R 18628948 intron qin + chr3R 18629035 intron qin + chr3R_4_18625001 chr3R_18625001 RAL-409_125b 2482 chr3R 18639651 18639663 chr3R 18639740 18639763 4 94 4.5 6.0 5.2 0.6 112 chr3R 18639651 intron,intron qin +,CG14301 - chr3R 18639707 intron,intron qin +,CG14301 - chr3R 18639763 intron,intron qin +,CG14301 - chr3R_4_18635001 chr3R_18635001 RAL-409_125b 2483 chr3R 18730003 18730038 chr3R 18730106 18730163 9 109 7.0 4.5 5.8 1.3 160 chr3R 18730003 exon Cha + chr3R 18730083 intron Cha + chr3R 18730163 exon Cha + chr3R_9_18730001 chr3R_18730001 RAL-409_125b 2484 chr3R 18766734 18766805 chr3R 18766862 18766932 18 124 4.5 5.5 5.0 3.0 198 chr3R 18766734 intron CG7720 - chr3R 18766833 intron CG7720 - chr3R 18766932 intron CG7720 - chr3R_18_18765001 chr3R_18765001 RAL-409_125b 2485 chr3R 18781651 18781696 chr3R 18781771 18781815 9 117 7.5 1.5 4.5 1.6 164 chr3R 18781651 intron CG7720 - chr3R 18781733 intron CG7720 - chr3R 18781815 intron CG7720 - chr3R_9_18780001 chr3R_18780001 RAL-409_125b 2486 chr3R 18792768 18792815 chr3R 18792891 18792948 5 129 4.5 0.0 2.2 1.6 180 chr3R 18792768 intron CG7720 - chr3R 18792858 intron CG7720 - chr3R 18792948 intron CG7720 - chr3R_5_18790001 chr3R_18790001 RAL-409_125b 2487 chr3R 18812062 18812088 chr3R 18812169 18812211 5 123 4.5 10.0 7.2 0.6 149 chr3R 18812062 intron CG18208 - chr3R 18812136 intron CG18208 - chr3R 18812211 intron CG18208 - chr3R_5_18810001 chr3R_18810001 RAL-409_125b 2488 chr3R 18817482 18817537 chr3R 18817630 18817690 13 149 1.0 1.5 1.2 5.9 208 chr3R 18817482 intron CG18208 - chr3R 18817586 intron CG18208 - chr3R 18817690 intron CG18208 - chr3R_13_18815001 chr3R_18815001 RAL-409_125b 2489 chr3R 18839776 18839834 chr3R 18839897 18839958 17 122 5.0 3.0 4.0 3.4 182 chr3R 18839776 intron CG18208 - chr3R 18839867 intron CG18208 - chr3R 18839958 intron CG18208 - chr3R_17_18835001 chr3R_18835001 RAL-409_125b 2490 chr3R 18897565 18897584 chr3R 18897686 18897710 9 124 10.5 3.0 6.8 1.2 145 chr3R 18897565 intergenic not near genes chr3R 18897638 intergenic CG14297 + chr3R 18897710 intergenic CG14297 + chr3R_9_18895001 chr3R_18895001 RAL-409_125b 2491 chr3R 18934400 18934438 chr3R 18934527 18934567 roo 4 124 5.0 5.5 5.2 0.6 167 chr3R 18934400 intron CG42613 + chr3R 18934484 intron CG42613 + chr3R 18934567 intron CG42613 + chr3R_4_18930001 chr3R_18930001 RAL-409_125b 2492 chr3R 18967131 18967186 chr3R 18967278 18967332 5 150 29.0 32.0 30.5 0.2 201 chr3R 18967131 intron,intron CG42613 +,CG43732 + chr3R 18967232 intron,intron CG42613 +,CG43732 + chr3R 18967332 intron,intron CG42613 +,CG43732 + chr3R_5_18965001 chr3R_18965001 RAL-409_125b 2493 chr3R 19009986 19010014 chr3R 19010108 19010113 4 118 8.0 3.5 5.8 0.6 127 chr3R 19009986 intron gukh + chr3R 19010050 intron gukh + chr3R 19010113 intron gukh + chr3R_4_19010001 chr3R_19010001 RAL-409_125b 2494 chr3R 19012991 19013034 chr3R 19013125 19013160 16 131 8.0 7.5 7.8 1.8 169 chr3R 19012991 intron gukh + chr3R 19013076 intron gukh + chr3R 19013160 intron gukh + chr3R_16_19010001 chr3R_19010001 RAL-409_125b 2495 chr3R 19033878 19033957 chr3R 19034006 19034066 11 117 9.5 6.5 8.0 1.2 188 chr3R 19033878 intron CG6026 + chr3R 19033972 intron CG6026 + chr3R 19034066 intron CG6026 + chr3R_11_19030001 chr3R_19030001 RAL-409_125b 2496 chr3R 19128826 19128839 chr3R 19129010 19129011 6 181 0.0 2.0 1.0 3.0 185 chr3R 19128826 intron CG6040 + chr3R 19128918 intron CG6040 + chr3R 19129011 intron CG6040 + chr3R_6_19125001 chr3R_19125001 RAL-409_125b 2497 chr3R 19159923 19159957 chr3R 19160046 19160086 5 126 5.0 5.5 5.2 0.8 163 chr3R 19159923 3` UTR nos + chr3R 19160004 3` UTR nos + chr3R 19160086 3` UTR nos + chr3R_5_19160001 chr3R_19160001 RAL-409_125b 2498 chr3R 19193002 19193005 chr3R 19197286 19197340 F-element 4 4304 1.5 4.5 3.0 1.0 4338 chr3R 19193002 intron CG31475 + chr3R 19195171 intron CG31475 + chr3R 19197340 intron CG31475 + chr3R_4_19195001 chr3R_19195001 RAL-409_125b 2499 chr3R 19206720 19206793 chr3R 19206959 19207001 10 228 5.5 4.5 5.0 1.7 281 chr3R 19206720 intergenic not near genes chr3R 19206860 intergenic not near genes chr3R 19207001 intergenic not near genes chr3R_10_19205001 chr3R_19205001 RAL-409_125b 2500 chr3R 19229333 19229396 chr3R 19229452 19229511 16 124 7.0 4.5 5.8 2.4 178 chr3R 19229333 intergenic CG5250 -,CG3773 + chr3R 19229422 intergenic CG3773 +,CG5250 - chr3R 19229511 exon CG3773 + chr3R_16_19225001 chr3R_19225001 RAL-409_125b 2501 chr3R 19276884 19276920 chr3R 19277014 19277045 6 129 5.0 0.5 2.8 1.6 161 chr3R 19276884 intergenic not near genes chr3R 19276964 intergenic not near genes chr3R 19277045 intergenic not near genes chr3R_6_19275001 chr3R_19275001 RAL-409_125b 2502 chr3R 19290498 19290539 chr3R 19290624 19290658 12 118 8.5 7.5 8.0 1.3 160 chr3R 19290498 intergenic not near genes chr3R 19290578 intergenic not near genes chr3R 19290658 intergenic not near genes chr3R_12_19290001 chr3R_19290001 RAL-409_125b 2503 chr3R 19296300 19296311 chr3R 19296416 19296430 4 120 12.0 5.0 8.5 0.4 130 chr3R 19296300 intergenic not near genes chr3R 19296365 intergenic not near genes chr3R 19296430 intergenic not near genes chr3R_4_19295001 chr3R_19295001 RAL-409_125b 2504 chr3R 19340362 19340422 chr3R 19340477 19340549 22 126 7.0 6.0 6.5 2.9 187 chr3R 19340362 intergenic not near genes chr3R 19340456 intergenic not near genes chr3R 19340549 intergenic not near genes chr3R_22_19340001 chr3R_19340001 RAL-409_125b 2505 chr3R 19344626 19344693 chr3R 19344804 19344873 21 183 3.0 5.0 4.0 4.2 247 chr3R 19344626 intergenic not near genes chr3R 19344750 intergenic not near genes chr3R 19344873 intergenic not near genes chr3R_21_19340001 chr3R_19340001 RAL-409_125b 2506 chr3R 19417509 19417558 chr3R 19417645 19417706 7 140 2.0 4.5 3.2 1.7 197 chr3R 19417509 intron CG31221 + chr3R 19417608 intron CG31221 + chr3R 19417706 intron CG31221 + chr3R_7_19415001 chr3R_19415001 RAL-409_125b 2507 chr3R 19474838 19474906 chr3R 19475128 19475182 7 287 3.5 1.0 2.2 2.2 344 chr3R 19474838 intron Dys + chr3R 19475010 intron Dys + chr3R 19475182 intron Dys + chr3R_7_19475001 chr3R_19475001 RAL-409_125b 2508 chr3R 19590619 19590647 chr3R 19590751 19590784 10 136 1.5 5.0 3.2 2.4 165 chr3R 19590619 exon Dys + chr3R 19590702 intron Dys + chr3R 19590784 exon Dys + chr3R_10_19590001 chr3R_19590001 RAL-409_125b 2509 chr3R 19591488 19591550 chr3R 19591618 19591681 6 129 2.5 1.5 2.0 2.0 193 chr3R 19591488 intron Dys + chr3R 19591584 intron Dys + chr3R 19591681 exon Dys + chr3R_6_19590001 chr3R_19590001 RAL-409_125b 2510 chr3R 19602721 19602781 chr3R 19602848 19602909 10 128 3.5 5.5 4.5 1.8 188 chr3R 19602721 intergenic CG7333 + chr3R 19602815 intergenic CG7333 + chr3R 19602909 intergenic CG7333 +,CG7342 + chr3R_10_19600001 chr3R_19600001 RAL-409_125b 2511 chr3R 19702282 19702349 chr3R 19702414 19702481 18 128 5.0 4.5 4.8 3.1 199 chr3R 19702282 intergenic not near genes chr3R 19702382 intergenic not near genes chr3R 19702481 intergenic not near genes chr3R_18_19700001 chr3R_19700001 RAL-409_125b 2512 chr3R 19749995 19750066 chr3R 19750125 19750196 16 127 3.5 6.5 5.0 2.7 201 chr3R 19749995 intron GluClalpha + chr3R 19750096 intron GluClalpha + chr3R 19750196 intron GluClalpha + chr3R_16_19750001 chr3R_19750001 RAL-409_125b 2513 chr3R 19762785 19762827 chr3R 19762950 19762972 14 161 5.5 7.5 6.5 1.9 187 chr3R 19762785 intron GluClalpha + chr3R 19762878 intron GluClalpha + chr3R 19762972 intron GluClalpha + chr3R_14_19760001 chr3R_19760001 RAL-409_125b 2514 chr3R 19783135 19783209 chr3R 19783273 19783347 15 136 1.5 3.0 2.2 4.7 212 chr3R 19783135 3` UTR CG11407 + chr3R 19783241 intergenic CG11407 +,CG11453 + chr3R 19783347 intergenic CG11453 +,CG11407 + chr3R_15_19780001 chr3R_19780001 RAL-409_125b 2515 chr3R 19793854 19793920 chr3R 19793997 19794061 19 139 4.0 7.0 5.5 2.9 207 chr3R 19793854 intergenic bnl - chr3R 19793958 intergenic bnl - chr3R 19794061 intergenic bnl - chr3R_19_19790001 chr3R_19790001 RAL-409_125b 2516 chr3R 19943843 19943872 chr3R 19943968 19943975 7 119 12.0 0.0 6.0 1.0 132 chr3R 19943843 intron Hs6st - chr3R 19943909 intron Hs6st - chr3R 19943975 intron Hs6st - chr3R_7_19940001 chr3R_19940001 RAL-409_125b 2517 chr3R 20008795 20008811 chr3R 20008926 20008942 4 131 9.0 9.0 9.0 0.4 147 chr3R 20008795 intergenic MED25 +,Hs6st - chr3R 20008868 intergenic MED25 +,Hs6st - chr3R 20008942 intergenic MED25 +,Hs6st - chr3R_4_20005001 chr3R_20005001 RAL-409_125b 2518 chr3R 20008812 20008837 chr3R 20008918 20008968 8 125 7.5 7.0 7.2 1.0 156 chr3R 20008812 intergenic MED25 +,Hs6st - chr3R 20008890 intergenic MED25 +,Hs6st - chr3R 20008968 5` UTR MED25 + chr3R_8_20005001 chr3R_20005001 RAL-409_125b 2519 chr3R 20059420 20059497 chr3R 20059548 20059627 16 128 4.5 4.5 4.5 2.9 207 chr3R 20059420 intron CG4390 - chr3R 20059524 intron CG4390 - chr3R 20059627 exon CG4390 - chr3R_16_20055001 chr3R_20055001 RAL-409_125b 2520 chr3R 20060137 20060188 chr3R 20060246 20060272 17 120 4.0 7.0 5.5 2.6 135 chr3R 20060137 intergenic CG4390 - chr3R 20060204 intergenic CG4390 - chr3R 20060272 intergenic not near genes chr3R_17_20060001 chr3R_20060001 RAL-409_125b 2521 chr3R 20060587 20060645 chr3R 20060720 20060768 16 129 10.0 6.5 8.2 1.7 181 chr3R 20060587 intergenic not near genes chr3R 20060678 intergenic not near genes chr3R 20060768 intergenic not near genes chr3R_16_20060001 chr3R_20060001 RAL-409_125b 2522 chr3R 20084379 20084434 chr3R 20084662 20084695 9 277 5.0 11.0 8.0 1.0 316 chr3R 20084379 intergenic not near genes chr3R 20084537 intergenic not near genes chr3R 20084695 intergenic not near genes chr3R_9_20080001 chr3R_20080001 RAL-409_125b 2523 chr3R 20109495 20109559 chr3R 20114744 20114815 copia 8 5253 3.0 3.5 3.2 1.9 5320 chr3R 20109495 intergenic not near genes chr3R 20112155 intergenic not near genes chr3R 20114815 intergenic CG10887 + chr3R_8_20110001 chr3R_20110001 RAL-409_125b 2524 chr3R 20124525 20124600 chr3R 20124662 20124719 13 133 9.0 6.0 7.5 1.5 194 chr3R 20124525 intergenic not near genes chr3R 20124622 intergenic not near genes chr3R 20124719 intergenic not near genes chr3R_13_20120001 chr3R_20120001 RAL-409_125b 2525 chr3R 20137165 20137220 chr3R 20137322 20137342 13 160 6.5 2.5 4.5 2.4 177 chr3R 20137165 intergenic not near genes chr3R 20137254 intergenic not near genes chr3R 20137342 intergenic not near genes chr3R_13_20135001 chr3R_20135001 RAL-409_125b 2526 chr3R 20149592 20149656 chr3R 20151670 20151726 10 2074 28.5 34.5 31.5 0.3 2134 chr3R 20149592 intergenic not near genes chr3R 20150659 intergenic not near genes chr3R 20151726 intergenic not near genes chr3R_10_20150001 chr3R_20150001 RAL-409_125b 2527 chr3R 20156656 20156714 chr3R 20165871 20165934 roo 10 9215 5.0 8.5 6.8 1.3 9278 chr3R 20156656 intergenic not near genes chr3R 20161295 intergenic not near genes chr3R 20165934 intergenic not near genes chr3R_10_20160001 chr3R_20160001 RAL-409_125b 2528 chr3R 20198925 20198959 chr3R 20199056 20199091 7 135 8.0 12.0 10.0 0.6 166 chr3R 20198925 intergenic not near genes chr3R 20199008 intergenic not near genes chr3R 20199091 intergenic not near genes chr3R_7_20195001 chr3R_20195001 RAL-409_125b 2529 chr3R 20201310 20201387 chr3R 20201446 20201457 21 131 6.5 7.5 7.0 2.6 147 chr3R 20201310 intergenic not near genes chr3R 20201384 intergenic not near genes chr3R 20201457 intergenic not near genes chr3R_21_20200001 chr3R_20200001 RAL-409_125b 2530 chr3R 20245240 20245294 chr3R 20248896 20248954 F-element 9 3659 4.5 0.0 2.2 2.8 3714 chr3R 20245240 3` UTR Nlg4 + chr3R 20247097 intergenic not near genes chr3R 20248954 intergenic not near genes chr3R_9_20245001 chr3R_20245001 RAL-409_125b 2531 chr3R 20252169 20252246 chr3R 20252297 20252374 9 125 4.0 6.0 5.0 1.5 205 chr3R 20252169 intergenic not near genes chr3R 20252272 intergenic cic + chr3R 20252374 intergenic cic + chr3R_9_20250001 chr3R_20250001 RAL-409_125b 2532 chr3R 20266486 20266535 chr3R 20273000 20273051 Burdock 16 6514 5.5 4.5 5.0 2.7 6565 chr3R 20266486 intron cic + chr3R 20269768 intron cic + chr3R 20273051 intron cic + chr3R_16_20265001 chr3R_20265001 RAL-409_125b 2533 chr3R 20274408 20274457 chr3R 20274598 20274652 14 193 11.0 7.5 9.2 1.4 244 chr3R 20274408 intron cic + chr3R 20274530 intron cic + chr3R 20274652 intron cic + chr3R_14_20270001 chr3R_20270001 RAL-409_125b 2534 chr3R 20282227 20282299 chr3R 20282353 20282425 14 126 1.5 5.0 3.2 3.3 198 chr3R 20282227 intron cic + chr3R 20282326 intron cic + chr3R 20282425 intron cic + chr3R_14_20280001 chr3R_20280001 RAL-409_125b 2535 chr3R 20330956 20331021 chr3R 20331492 20331557 roo 20 535 5.5 5.5 5.5 3.1 601 chr3R 20330956 intergenic Sirt2 + chr3R 20331256 intergenic Sirt2 + chr3R 20331557 intergenic not near genes chr3R_20_20330001 chr3R_20330001 RAL-409_125b 2536 chr3R 20349606 20349660 chr3R 20350405 20350450 8 797 3.0 3.5 3.2 1.9 844 chr3R 20349606 intergenic not near genes chr3R 20350028 intergenic not near genes chr3R 20350450 intergenic not near genes chr3R_8_20350001 chr3R_20350001 RAL-409_125b 2537 chr3R 20364430 20364472 chr3R 20364743 20364809 13 332 7.0 5.5 6.2 1.8 379 chr3R 20364430 intergenic not near genes chr3R 20364620 intergenic not near genes chr3R 20364809 intergenic not near genes chr3R_13_20360001 chr3R_20360001 RAL-409_125b 2538 chr3R 20394780 20394818 chr3R 20394906 20394944 7 121 1.5 1.0 1.2 3.2 164 chr3R 20394780 intron Gfrl - chr3R 20394862 intron Gfrl - chr3R 20394944 intron Gfrl - chr3R_7_20390001 chr3R_20390001 RAL-409_125b 2539 chr3R 20420355 20420416 chr3R 20420800 20420861 8 442 5.5 3.5 4.5 1.5 506 chr3R 20420355 intron Gfrl - chr3R 20420608 intron Gfrl - chr3R 20420861 intron Gfrl - chr3R_8_20420001 chr3R_20420001 RAL-409_125b 2540 chr3R 20425048 20425114 chr3R 20425483 20425558 10 431 5.5 6.5 6.0 1.4 510 chr3R 20425048 intron Gfrl - chr3R 20425303 intron Gfrl - chr3R 20425558 intron Gfrl - chr3R_10_20425001 chr3R_20425001 RAL-409_125b 2541 chr3R 20434806 20434860 chr3R 20435041 20435095 9 234 4.0 6.0 5.0 1.5 289 chr3R 20434806 intron Gfrl - chr3R 20434950 intron Gfrl - chr3R 20435095 intron Gfrl - chr3R_9_20430001 chr3R_20430001 RAL-409_125b 2542 chr3R 20450073 20450144 chr3R 20450203 20450279 4 134 2.0 0.0 1.0 2.0 206 chr3R 20450073 intron Gfrl - chr3R 20450176 intron Gfrl - chr3R 20450279 intron Gfrl - chr3R_4_20450001 chr3R_20450001 RAL-409_125b 2543 chr3R 20469243 20469466 chr3R 20469386 20469599 21 136 1.0 0.5 0.8 11.7 356 chr3R 20469243 intron Gfrl - chr3R 20469421 intron Gfrl - chr3R 20469599 intron Gfrl - chr3R_21_20465001 chr3R_20465001 RAL-409_125b 2544 chr3R 20499838 20499895 chr3R 20499973 20500030 10 135 8.5 6.0 7.2 1.2 192 chr3R 20499838 intergenic Dic2 - chr3R 20499934 intergenic Dic2 - chr3R 20500030 3` UTR Dic2 - chr3R_10_20495001 chr3R_20495001 RAL-409_125b 2545 chr3R 20512965 20513007 chr3R 20515718 20515760 opus 12 2752 4.5 5.0 4.8 2.1 2795 chr3R 20512965 intergenic CG4288 - chr3R 20514362 intergenic not near genes chr3R 20515760 intergenic not near genes chr3R_12_20510001 chr3R_20510001 RAL-409_125b 2546 chr3R 20516496 20516565 chr3R 20516902 20516941 17 402 5.5 6.0 5.8 2.5 445 chr3R 20516496 intergenic not near genes chr3R 20516718 intergenic not near genes chr3R 20516941 intergenic not near genes chr3R_17_20515001 chr3R_20515001 RAL-409_125b 2547 chr3R 20617460 20617517 chr3R 20617779 20617803 9 315 4.5 4.5 4.5 1.6 343 chr3R 20617460 intergenic CG5466 + chr3R 20617632 intergenic CG5466 + chr3R 20617803 intergenic CG5466 + chr3R_9_20615001 chr3R_20615001 RAL-409_125b 2548 chr3R 20686934 20686991 chr3R 20687400 20687466 16 478 4.0 6.5 5.2 2.6 532 chr3R 20686934 intergenic not near genes chr3R 20687200 intergenic not near genes chr3R 20687466 intergenic not near genes chr3R_16_20685001 chr3R_20685001 RAL-409_125b 2549 chr3R 20703454 20703509 chr3R 20703886 20703947 14 442 8.5 7.0 7.8 1.6 493 chr3R 20703454 intron Oamb - chr3R 20703700 intron Oamb - chr3R 20703947 intron Oamb - chr3R_14_20700001 chr3R_20700001 RAL-409_125b 2550 chr3R 20707712 20707770 chr3R 20707972 20708035 14 261 6.0 7.0 6.5 1.9 323 chr3R 20707712 intron Oamb - chr3R 20707874 intron Oamb - chr3R 20708035 intron Oamb - chr3R_14_20705001 chr3R_20705001 RAL-409_125b 2551 chr3R 20722809 20722882 chr3R 20722985 20723041 14 164 4.5 3.5 4.0 2.8 232 chr3R 20722809 intergenic not near genes chr3R 20722925 intergenic not near genes chr3R 20723041 intergenic not near genes chr3R_14_20720001 chr3R_20720001 RAL-409_125b 2552 chr3R 20724468 20724522 chr3R 20724586 20724630 10 121 8.0 8.5 8.2 1.1 162 chr3R 20724468 intergenic not near genes chr3R 20724549 intergenic not near genes chr3R 20724630 intergenic not near genes chr3R_10_20720001 chr3R_20720001 RAL-409_125b 2553 chr3R 20730878 20731041 chr3R 20731028 20731174 8 141 0.5 0.5 0.5 5.3 296 chr3R 20730878 intergenic not near genes chr3R 20731026 intergenic not near genes chr3R 20731174 intergenic CG31205 + chr3R_8_20730001 chr3R_20730001 RAL-409_125b 2554 chr3R 20734190 20734209 chr3R 20734431 20734441 8 243 0.0 1.5 0.8 4.4 251 chr3R 20734190 intergenic not near genes chr3R 20734316 intergenic not near genes chr3R 20734441 intergenic not near genes chr3R_8_20730001 chr3R_20730001 RAL-409_125b 2555 chr3R 20734964 20734976 chr3R 20735099 20735112 5 133 13.5 4.0 8.8 0.5 148 chr3R 20734964 intergenic not near genes chr3R 20735038 intergenic not near genes chr3R 20735112 intergenic not near genes chr3R_5_20735001 chr3R_20735001 RAL-409_125b 2556 chr3R 20734992 20735042 chr3R 20735097 20735126 11 112 2.5 3.0 2.8 2.9 134 chr3R 20734992 intergenic not near genes chr3R 20735059 intergenic not near genes chr3R 20735126 intergenic cdc2c + chr3R_11_20735001 chr3R_20735001 RAL-409_125b 2557 chr3R 20767478 20767517 chr3R 20767605 20767628 8 131 8.5 5.0 6.8 1.0 150 chr3R 20767478 intron Syp + chr3R 20767553 intron Syp + chr3R 20767628 intron Syp + chr3R_8_20765001 chr3R_20765001 RAL-409_125b 2558 chr3R 20787390 20787435 chr3R 20787530 20787561 10 135 7.0 6.0 6.5 1.3 171 chr3R 20787390 intron Syp + chr3R 20787476 intron Syp + chr3R 20787561 intron Syp + chr3R_10_20785001 chr3R_20785001 RAL-409_125b 2559 chr3R 20794829 20794903 chr3R 20794964 20795040 10 134 6.5 6.5 6.5 1.3 211 chr3R 20794829 intron Syp + chr3R 20794934 intron Syp + chr3R 20795040 intron Syp + chr3R_10_20790001 chr3R_20790001 RAL-409_125b 2560 chr3R 20850062 20850081 chr3R 20850197 20850216 6 134 0.5 3.5 2.0 2.0 154 chr3R 20850062 intergenic RpS30 + chr3R 20850139 intergenic RpS30 + chr3R 20850216 intergenic RpS30 + chr3R_6_20850001 chr3R_20850001 RAL-409_125b 2561 chr3R 20854460 20854509 chr3R 20859280 20859333 Doc 15 4828 6.0 5.0 5.5 2.3 4873 chr3R 20854460 intron Ir93a - chr3R 20856896 intron Ir93a - chr3R 20859333 exon Ir93a - chr3R_15_20855001 chr3R_20855001 RAL-409_125b 2562 chr3R 20874471 20874544 chr3R 20874605 20874679 7 135 5.5 5.0 5.2 1.1 208 chr3R 20874471 3` UTR TotB + chr3R 20874575 intergenic TotB + chr3R 20874679 intergenic TotB + chr3R_7_20870001 chr3R_20870001 RAL-409_125b 2563 chr3R 20901304 20901366 chr3R 20901434 20901494 13 126 5.5 6.0 5.8 1.9 190 chr3R 20901304 intergenic not near genes chr3R 20901399 intergenic not near genes chr3R 20901494 intergenic CG5621 + chr3R_13_20900001 chr3R_20900001 RAL-409_125b 2564 chr3R 20924937 20924946 chr3R 20925056 20925068 6 124 5.0 14.0 9.5 0.6 131 chr3R 20924937 intron,intron CG31191 -,hdly + chr3R 20925002 intron,intron CG31191 -,hdly + chr3R 20925068 intron,intron CG31191 -,hdly + chr3R_6_20925001 chr3R_20925001 RAL-409_125b 2565 chr3R 20946968 20946991 chr3R 20947320 20947343 7 350 5.5 9.0 7.2 0.9 375 chr3R 20946968 intergenic not near genes chr3R 20947156 intergenic not near genes chr3R 20947343 intergenic not near genes chr3R_7_20945001 chr3R_20945001 RAL-409_125b 2566 chr3R 20958375 20958582 chr3R 20958526 20958680 17 125 10.5 16.0 13.2 1.2 305 chr3R 20958375 intron Atpalpha + chr3R 20958528 intron Atpalpha + chr3R 20958680 intron Atpalpha + chr3R_17_20955001 chr3R_20955001 RAL-409_125b 2567 chr3R 21013974 21014030 chr3R 21014102 21014142 17 126 5.5 5.0 5.2 2.7 168 chr3R 21013974 3` UTR Calx + chr3R 21014058 3` UTR Calx + chr3R 21014142 3` UTR Calx + chr3R_17_21010001 chr3R_21010001 RAL-409_125b 2568 chr3R 21132581 21132642 chr3R 21132714 21132765 7 131 6.0 2.0 4.0 1.4 184 chr3R 21132581 3` UTR Ice2 + chr3R 21132673 3` UTR Ice2 + chr3R 21132765 exon CG7009 - chr3R_7_21130001 chr3R_21130001 RAL-409_125b 2569 chr3R 21141629 21141675 chr3R 21150159 21150182 Tirant 6 8528 6.0 6.5 6.2 0.8 8553 chr3R 21141629 intron SNF4Agamma + chr3R 21145906 intron SNF4Agamma + chr3R 21150182 intron SNF4Agamma + chr3R_6_21145001 chr3R_21145001 RAL-409_125b 2570 chr3R 21185996 21186056 chr3R 21186145 21186206 13 147 8.0 8.5 8.2 1.4 210 chr3R 21185996 intron SNF4Agamma + chr3R 21186101 intron SNF4Agamma + chr3R 21186206 intron SNF4Agamma + chr3R_13_21185001 chr3R_21185001 RAL-409_125b 2571 chr3R 21214633 21214662 chr3R 21214918 21214947 10 282 7.0 6.5 6.8 1.3 314 chr3R 21214633 intergenic CG5862 + chr3R 21214790 intergenic CG5862 + chr3R 21214947 intergenic CG5862 + chr3R_10_21210001 chr3R_21210001 RAL-409_125b 2572 chr3R 21235167 21235233 chr3R 21235750 21235805 24 584 4.0 7.5 5.8 3.5 638 chr3R 21235167 intron e - chr3R 21235486 intron e - chr3R 21235805 intron e - chr3R_24_21235001 chr3R_21235001 RAL-409_125b 2573 chr3R 21239810 21239955 chr3R 21239941 21240056 11 116 2.0 1.5 1.8 3.9 246 chr3R 21239810 intergenic not near genes chr3R 21239933 intergenic not near genes chr3R 21240056 intergenic not near genes chr3R_11_21235001 chr3R_21235001 RAL-409_125b 2574 chr3R 21245835 21245864 chr3R 21245965 21245999 4 134 8.5 6.5 7.5 0.5 164 chr3R 21245835 intergenic CG5892 + chr3R 21245917 intergenic CG5892 + chr3R 21245999 intergenic not near genes chr3R_4_21245001 chr3R_21245001 RAL-409_125b 2575 chr3R 21287603 21287659 chr3R 21288005 21288034 9 389 5.5 3.5 4.5 1.6 431 chr3R 21287603 intron SIFaR - chr3R 21287818 intron SIFaR - chr3R 21288034 intron SIFaR - chr3R_9_21285001 chr3R_21285001 RAL-409_125b 2576 chr3R 21322925 21322999 chr3R 21323054 21323131 8 127 6.0 3.5 4.8 1.4 206 chr3R 21322925 exon CG16791 - chr3R 21323028 intron CG16791 - chr3R 21323131 intron CG16791 - chr3R_8_21320001 chr3R_21320001 RAL-409_125b 2577 chr3R 21330755 21330827 chr3R 21330895 21330967 25 136 5.0 7.0 6.0 3.6 212 chr3R 21330755 intron CG16791 - chr3R 21330861 intron CG16791 - chr3R 21330967 intron CG16791 - chr3R_25_21330001 chr3R_21330001 RAL-409_125b 2578 chr3R 21379431 21379464 chr3R 21379632 21379665 5 201 9.0 5.5 7.2 0.6 234 chr3R 21379431 exon tin + chr3R 21379548 intron tin + chr3R 21379665 intron tin + chr3R_5_21375001 chr3R_21375001 RAL-409_125b 2579 chr3R 21383269 21383299 chr3R 21383399 21383429 8 127 3.0 4.5 3.8 1.7 160 chr3R 21383269 intergenic not near genes chr3R 21383349 intergenic not near genes chr3R 21383429 intergenic not near genes chr3R_8_21380001 chr3R_21380001 RAL-409_125b 2580 chr3R 21385889 21385926 chr3R 21386008 21386017 7 116 5.5 1.0 3.2 1.7 128 chr3R 21385889 intergenic not near genes chr3R 21385953 intergenic not near genes chr3R 21386017 intergenic not near genes chr3R_7_21385001 chr3R_21385001 RAL-409_125b 2581 chr3R 21464355 21464411 chr3R 21464491 21464545 5 135 3.0 3.0 3.0 1.2 190 chr3R 21464355 intergenic not near genes chr3R 21464450 intergenic not near genes chr3R 21464545 intergenic not near genes chr3R_5_21460001 chr3R_21460001 RAL-409_125b 2582 chr3R 21471980 21472026 chr3R 21472101 21472157 8 128 9.0 6.0 7.5 0.9 177 chr3R 21471980 intergenic not near genes chr3R 21472068 intergenic not near genes chr3R 21472157 intergenic not near genes chr3R_8_21470001 chr3R_21470001 RAL-409_125b 2583 chr3R 21494638 21494715 chr3R 21494768 21494812 14 126 4.5 3.0 3.8 2.9 174 chr3R 21494638 intergenic not near genes chr3R 21494725 intergenic not near genes chr3R 21494812 intergenic not near genes chr3R_14_21490001 chr3R_21490001 RAL-409_125b 2584 chr3R 21505187 21505246 chr3R 21505309 21505378 17 119 4.0 6.5 5.2 2.7 191 chr3R 21505187 intron C15 + chr3R 21505282 intron C15 + chr3R 21505378 intron C15 + chr3R_17_21505001 chr3R_21505001 RAL-409_125b 2585 chr3R 21506830 21506905 chr3R 21506966 21507035 10 134 4.5 4.0 4.2 1.9 205 chr3R 21506830 intron C15 + chr3R 21506932 intron C15 + chr3R 21507035 intron C15 + chr3R_10_21505001 chr3R_21505001 RAL-409_125b 2586 chr3R 21518222 21518272 chr3R 21518352 21518406 8 129 0.0 2.5 1.2 3.6 184 chr3R 21518222 intergenic not near genes chr3R 21518314 intergenic not near genes chr3R 21518406 intergenic not near genes chr3R_8_21515001 chr3R_21515001 RAL-409_125b 2587 chr3R 21519941 21520129 chr3R 21520092 21520271 23 148 0.0 0.0 0.0 23.0 330 chr3R 21519941 intergenic not near genes chr3R 21520106 intergenic not near genes chr3R 21520271 intergenic not near genes chr3R_23_21520001 chr3R_21520001 RAL-409_125b 2588 chr3R 21613413 21613463 chr3R 21613531 21613594 15 126 6.5 7.0 6.8 1.9 181 chr3R 21613413 intron InR - chr3R 21613504 intron InR - chr3R 21613594 intron InR - chr3R_15_21610001 chr3R_21610001 RAL-409_125b 2589 chr3R 21641241 21641281 chr3R 21641332 21641397 8 114 9.0 9.5 9.2 0.8 156 chr3R 21641241 intron E2f - chr3R 21641319 intron E2f - chr3R 21641397 intron E2f - chr3R_8_21640001 chr3R_21640001 RAL-409_125b 2590 chr3R 21652508 21652570 chr3R 21652638 21652706 6 131 1.5 1.0 1.2 2.7 198 chr3R 21652508 intron E2f - chr3R 21652607 intron E2f - chr3R 21652706 intron E2f - chr3R_6_21650001 chr3R_21650001 RAL-409_125b 2591 chr3R 21733948 21733956 chr3R 21734101 21734104 4 152 1.0 1.5 1.2 1.8 156 chr3R 21733948 intergenic not near genes chr3R 21734026 intergenic not near genes chr3R 21734104 intergenic not near genes chr3R_4_21730001 chr3R_21730001 RAL-409_125b 2592 chr3R 21761083 21761149 chr3R 21768525 21768591 mdg1 11 7430 5.5 9.5 7.5 1.3 7508 chr3R 21761083 exon CG42335 + chr3R 21764837 intron CG42335 + chr3R 21768591 exon CG42335 + chr3R_11_21760001 chr3R_21760001 RAL-409_125b 2593 chr3R 21790925 21790985 chr3R 21791053 21791120 20 132 3.0 4.0 3.5 4.4 195 chr3R 21790925 intron CASK - chr3R 21791022 intron CASK - chr3R 21791120 intron CASK - chr3R_20_21790001 chr3R_21790001 RAL-409_125b 2594 chr3R 21794423 21794479 chr3R 21794553 21794606 12 120 3.5 6.0 4.8 2.1 183 chr3R 21794423 intron CASK - chr3R 21794514 intron CASK - chr3R 21794606 intron CASK - chr3R_12_21790001 chr3R_21790001 RAL-409_125b 2595 chr3R 21903492 21903632 chr3R 21903615 21903774 6 142 0.0 0.0 0.0 6.0 282 chr3R 21903492 intron CG6678 + chr3R 21903633 intron CG6678 + chr3R 21903774 intron CG6678 + chr3R_6_21900001 chr3R_21900001 RAL-409_125b 2596 chr3R 8339246 8339247 chr3R 21907534 21907534 5 13568288 27.5 18.5 23.0 0.2 13568288 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907534 intergenic CG6678 + chr3R_5_15120001 chr3R_15120001 RAL-409_125b 2597 chr3R 21907534 21907534 chr3R 28831801 28831802 30 6924268 19.5 20.0 19.8 1.4 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_30_25365001 chr3R_25365001 RAL-409_125b 2598 chr3R 8339246 8339247 chr3R 21907535 21907535 8 13568288 27.5 19.0 23.2 0.3 13568289 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907535 intergenic CG6678 + chr3R_8_15120001 chr3R_15120001 RAL-409_125b 2599 chr3R 9620954 9620956 chr3R 21907535 21907535 4 12286580 15.5 19.0 17.2 0.2 12286581 chr3R 9620954 intron CG8312 + chr3R 15764244 intergenic not near genes chr3R 21907535 intergenic CG6678 + chr3R_4_15760001 chr3R_15760001 RAL-409_125b 2600 chr3R 21907535 21907535 chr3R 28831801 28831802 35 6924267 19.5 20.0 19.8 1.7 6924267 chr3R 21907535 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_35_25365001 chr3R_25365001 RAL-409_125b 2601 chr3R 21907536 21907536 chr3R 28831801 28831802 51 6924266 19.5 20.0 19.8 2.5 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_51_25365001 chr3R_25365001 RAL-409_125b 2602 chr3R 21924011 21924035 chr3R 21924121 21924164 4 124 6.5 1.5 4.0 0.8 153 chr3R 21924011 intergenic not near genes chr3R 21924088 intergenic not near genes chr3R 21924164 intergenic not near genes chr3R_4_21920001 chr3R_21920001 RAL-409_125b 2603 chr3R 21937185 21937234 chr3R 21937309 21937356 7 125 3.0 10.5 6.8 0.9 171 chr3R 21937185 intergenic not near genes chr3R 21937270 intergenic not near genes chr3R 21937356 intergenic not near genes chr3R_7_21935001 chr3R_21935001 RAL-409_125b 2604 chr3R 21952100 21952160 chr3R 21952235 21952295 24 134 5.5 11.0 8.2 2.6 195 chr3R 21952100 intron Eip93F + chr3R 21952198 intron Eip93F + chr3R 21952295 intron Eip93F + chr3R_24_21950001 chr3R_21950001 RAL-409_125b 2605 chr3R 21958566 21958629 chr3R 21958701 21958769 12 136 7.0 7.0 7.0 1.5 203 chr3R 21958566 intron Eip93F + chr3R 21958668 intron Eip93F + chr3R 21958769 intron Eip93F + chr3R_12_21955001 chr3R_21955001 RAL-409_125b 2606 chr3R 22084570 22084623 chr3R 22084709 22084762 9 139 4.5 9.0 6.8 1.2 192 chr3R 22084570 intergenic not near genes chr3R 22084666 intergenic not near genes chr3R 22084762 intergenic not near genes chr3R_9_22080001 chr3R_22080001 RAL-409_125b 2607 chr3R 22116364 22116432 chr3R 22116781 22116843 24 415 11.5 13.5 12.5 1.8 479 chr3R 22116364 exon Ir94b - chr3R 22116604 exon Ir94b - chr3R 22116843 exon Ir94b - chr3R_24_22115001 chr3R_22115001 RAL-409_125b 2608 chr3R 22117374 22117445 chr3R 22117500 22117560 29 124 8.5 5.0 6.8 3.7 186 chr3R 22117374 intergenic Ir94b -,Ir94c - chr3R 22117467 intergenic Ir94c -,Ir94b - chr3R 22117560 intergenic Ir94c -,Ir94b - chr3R_29_22115001 chr3R_22115001 RAL-409_125b 2609 chr3R 22234666 22234706 chr3R 22236023 22236075 pogo 12 1364 2.0 3.5 2.8 3.2 1409 chr3R 22234666 intron SKIP + chr3R 22235370 intron SKIP + chr3R 22236075 intron SKIP + chr3R_12_22235001 chr3R_22235001 RAL-409_125b 2610 chr3R 22239472 22239502 chr3R 22248571 22248612 roo 6 9108 11.0 9.0 10.0 0.5 9140 chr3R 22239472 intron SKIP + chr3R 22244042 intron SKIP + chr3R 22248612 intron SKIP + chr3R_6_22240001 chr3R_22240001 RAL-409_125b 2611 chr3R 22292436 22292503 chr3R 22292566 22292630 14 126 9.5 9.0 9.2 1.4 194 chr3R 22292436 exon SKIP + chr3R 22292533 intron SKIP + chr3R 22292630 exon SKIP + chr3R_14_22290001 chr3R_22290001 RAL-409_125b 2612 chr3R 22428547 22428590 chr3R 22428654 22428707 11 119 7.0 6.0 6.5 1.5 160 chr3R 22428547 intron CG13847 - chr3R 22428627 intron CG13847 - chr3R 22428707 intron CG13847 - chr3R_11_22425001 chr3R_22425001 RAL-409_125b 2613 chr3R 22433058 22433080 chr3R 22433203 22433207 6 141 9.0 9.0 9.0 0.6 149 chr3R 22433058 intron CG13847 - chr3R 22433132 intron CG13847 - chr3R 22433207 intron CG13847 - chr3R_6_22430001 chr3R_22430001 RAL-409_125b 2614 chr3R 22450534 22450565 chr3R 22453188 22453255 NOF 8 2683 4.5 6.5 5.5 1.2 2721 chr3R 22450534 intron CG34376 + chr3R 22451894 intron CG34376 + chr3R 22453255 intron CG34376 + chr3R_8_22450001 chr3R_22450001 RAL-409_125b 2615 chr3R 22492352 22492407 chr3R 22492483 22492513 13 125 4.5 8.5 6.5 1.7 161 chr3R 22492352 3` UTR CG7045 + chr3R 22492432 intergenic CG7045 + chr3R 22492513 intergenic CG7045 +,CG7046 + chr3R_13_22490001 chr3R_22490001 RAL-409_125b 2616 chr3R 22538420 22538472 chr3R 22538540 22538590 15 121 5.0 8.5 6.8 1.9 170 chr3R 22538420 intron CG5326 - chr3R 22538505 intron CG5326 - chr3R 22538590 intron CG5326 - chr3R_15_22535001 chr3R_22535001 RAL-409_125b 2617 chr3R 22646892 22646925 chr3R 22647020 22647058 9 135 11.0 0.0 5.5 1.4 166 chr3R 22646892 intron wake + chr3R 22646975 intron wake + chr3R 22647058 intron wake + chr3R_9_22645001 chr3R_22645001 RAL-409_125b 2618 chr3R 22769067 22769115 chr3R 22769173 22769242 9 123 4.5 8.0 6.2 1.2 175 chr3R 22769067 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769154 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769242 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_9_22765001 chr3R_22765001 RAL-409_125b 2619 chr3R 22794231 22794296 chr3R 22794507 22794572 5 276 2.5 6.5 4.5 0.9 341 chr3R 22794231 intergenic CG7029 + chr3R 22794402 intergenic CG7029 + chr3R 22794572 intergenic not near genes chr3R_5_22790001 chr3R_22790001 RAL-409_125b 2620 chr3R 22797725 22797924 chr3R 22797843 22798070 22 135 0.0 0.0 0.0 22.0 345 chr3R 22797725 intergenic not near genes chr3R 22797898 intergenic not near genes chr3R 22798070 intergenic not near genes chr3R_22_22795001 chr3R_22795001 RAL-409_125b 2621 chr3R 22823997 22824052 chr3R 22824133 22824188 8 133 7.0 6.5 6.8 1.0 191 chr3R 22823997 3` UTR CR44350 - chr3R 22824092 3` UTR CR44350 - chr3R 22824188 3` UTR CR44350 - chr3R_8_22820001 chr3R_22820001 RAL-409_125b 2622 chr3R 22860137 22860166 chr3R 22860266 22860308 11 138 0.5 9.5 5.0 1.8 171 chr3R 22860137 intergenic not near genes chr3R 22860222 intergenic not near genes chr3R 22860308 intergenic not near genes chr3R_11_22860001 chr3R_22860001 RAL-409_125b 2623 chr3R 22881196 22881215 chr3R 22884947 22884971 Doc 5 3755 4.0 6.5 5.2 0.8 3775 chr3R 22881196 intergenic not near genes chr3R 22883084 intergenic not near genes chr3R 22884971 intergenic not near genes chr3R_5_22880001 chr3R_22880001 RAL-409_125b 2624 chr3R 22919131 22919155 chr3R 22919271 22919289 7 137 9.0 8.0 8.5 0.7 158 chr3R 22919131 intron klg + chr3R 22919210 intron klg + chr3R 22919289 intron klg + chr3R_7_22915001 chr3R_22915001 RAL-409_125b 2625 chr3R 22919159 22919180 chr3R 22919265 22919292 5 118 6.0 7.0 6.5 0.7 133 chr3R 22919159 intron klg + chr3R 22919226 intron klg + chr3R 22919292 intron klg + chr3R_5_22915001 chr3R_22915001 RAL-409_125b 2626 chr3R 22974267 22974295 chr3R 22974390 22974429 7 129 1.5 4.0 2.8 1.8 162 chr3R 22974267 intergenic not near genes chr3R 22974348 intergenic not near genes chr3R 22974429 intergenic not near genes chr3R_7_22970001 chr3R_22970001 RAL-409_125b 2627 chr3R 22990314 22990384 chr3R 22990617 22990664 14 287 3.5 5.5 4.5 2.5 350 chr3R 22990314 intron,exon Nha2 -,Or94b + chr3R 22990489 intron,intron Nha2 -,Or94b + chr3R 22990664 intron Nha2 - chr3R_14_22990001 chr3R_22990001 RAL-409_125b 2628 chr3R 23016154 23016221 chr3R 23016281 23016301 6 110 6.0 9.0 7.5 0.7 147 chr3R 23016154 intergenic not near genes chr3R 23016228 intergenic not near genes chr3R 23016301 intergenic not near genes chr3R_6_23015001 chr3R_23015001 RAL-409_125b 2629 chr3R 23070609 23070700 chr3R 23070739 23070828 9 130 0.0 0.0 0.0 9.0 219 chr3R 23070609 3` UTR CG13830 - chr3R 23070718 3` UTR CG13830 - chr3R 23070828 3` UTR CG13830 - chr3R_9_23070001 chr3R_23070001 RAL-409_125b 2630 chr3R 23090364 23090426 chr3R 23090490 23090559 16 129 8.5 10.0 9.2 1.6 195 chr3R 23090364 intron CG13830 - chr3R 23090462 intron CG13830 - chr3R 23090559 intron CG13830 - chr3R_16_23090001 chr3R_23090001 RAL-409_125b 2631 chr3R 23182635 23182701 chr3R 23182768 23182834 15 131 4.0 3.0 3.5 3.3 199 chr3R 23182635 intron Irk1 + chr3R 23182734 intron Irk1 + chr3R 23182834 intron Irk1 + chr3R_15_23180001 chr3R_23180001 RAL-409_125b 2632 chr3R 23198055 23198135 chr3R 23198351 23198426 15 287 4.5 8.0 6.2 2.1 371 chr3R 23198055 intron cnc - chr3R 23198240 intron cnc - chr3R 23198426 intron cnc - chr3R_15_23195001 chr3R_23195001 RAL-409_125b 2633 chr3R 23245951 23246009 chr3R 23246078 23246141 9 124 5.0 4.0 4.5 1.6 190 chr3R 23245951 intron CG4467 - chr3R 23246046 intron CG4467 - chr3R 23246141 intron CG4467 - chr3R_9_23245001 chr3R_23245001 RAL-409_125b 2634 chr3R 23291219 23291224 chr3R 23291339 23291360 4 125 13.5 10.0 11.8 0.3 141 chr3R 23291219 3` UTR pnt - chr3R 23291290 3` UTR pnt - chr3R 23291360 3` UTR pnt - chr3R_4_23290001 chr3R_23290001 RAL-409_125b 2635 chr3R 23291240 23291278 chr3R 23291335 23291394 12 126 10.5 9.5 10.0 1.1 154 chr3R 23291240 3` UTR pnt - chr3R 23291317 3` UTR pnt - chr3R 23291394 exon pnt - chr3R_12_23290001 chr3R_23290001 RAL-409_125b 2636 chr3R 23303581 23303659 chr3R 23303708 23303776 11 118 7.5 5.5 6.5 1.5 195 chr3R 23303581 intron pnt - chr3R 23303678 intron pnt - chr3R 23303776 intron pnt - chr3R_11_23300001 chr3R_23300001 RAL-409_125b 2637 chr3R 23311637 23311710 chr3R 23311781 23311849 19 139 11.0 8.0 9.5 1.8 212 chr3R 23311637 intron pnt - chr3R 23311743 intron pnt - chr3R 23311849 intron pnt - chr3R_19_23310001 chr3R_23310001 RAL-409_125b 2638 chr3R 23338869 23338907 chr3R 23338970 23339033 7 106 11.0 12.0 11.5 0.6 164 chr3R 23338869 intron pnt - chr3R 23338951 intron pnt - chr3R 23339033 intron pnt - chr3R_7_23335001 chr3R_23335001 RAL-409_125b 2639 chr3R 23342593 23342666 chr3R 23342778 23342851 26 182 8.5 11.5 10.0 2.4 258 chr3R 23342593 intron pnt - chr3R 23342722 intron pnt - chr3R 23342851 intron pnt - chr3R_26_23340001 chr3R_23340001 RAL-409_125b 2640 chr3R 23346797 23346856 chr3R 23346925 23346984 8 128 4.0 3.5 3.8 1.7 187 chr3R 23346797 intergenic not near genes chr3R 23346890 intergenic not near genes chr3R 23346984 intergenic not near genes chr3R_8_23345001 chr3R_23345001 RAL-409_125b 2641 chr3R 23356966 23356984 chr3R 23357102 23357120 4 136 5.0 7.0 6.0 0.6 154 chr3R 23356966 intron Sec13 + chr3R 23357043 intron Sec13 + chr3R 23357120 intron Sec13 + chr3R_4_23355001 chr3R_23355001 RAL-409_125b 2642 chr3R 23386276 23386344 chr3R 23386436 23386497 12 153 6.0 4.0 5.0 2.0 221 chr3R 23386276 intergenic not near genes chr3R 23386386 intergenic not near genes chr3R 23386497 intergenic not near genes chr3R_12_23385001 chr3R_23385001 RAL-409_125b 2643 chr3R 23390916 23390958 chr3R 23391048 23391087 11 129 5.0 0.5 2.8 2.9 171 chr3R 23390916 intergenic CR43387 + chr3R 23391002 intergenic CR43387 + chr3R 23391087 intergenic not near genes chr3R_11_23390001 chr3R_23390001 RAL-409_125b 2644 chr3R 23461522 23461561 chr3R 23463993 23464032 11 2469 20.0 30.0 25.0 0.4 2510 chr3R 23461522 intron CG4374 - chr3R 23462777 intron CG4374 - chr3R 23464032 intron CG4374 - chr3R_11_23460001 chr3R_23460001 RAL-409_125b 2645 chr3R 23497908 23497964 chr3R 23498034 23498080 6 120 8.0 5.5 6.8 0.8 172 chr3R 23497908 intergenic not near genes chr3R 23497994 intergenic not near genes chr3R 23498080 intergenic not near genes chr3R_6_23495001 chr3R_23495001 RAL-409_125b 2646 chr3R 23543448 23543463 chr3R 23543930 23543950 5 477 13.0 4.0 8.5 0.5 502 chr3R 23543448 intergenic not near genes chr3R 23543699 intergenic not near genes chr3R 23543950 intergenic not near genes chr3R_5_23540001 chr3R_23540001 RAL-409_125b 2647 chr3R 23543464 23543508 chr3R 23543926 23543989 12 458 8.5 3.5 6.0 1.7 525 chr3R 23543464 intergenic not near genes chr3R 23543726 intergenic not near genes chr3R 23543989 intergenic not near genes chr3R_12_23540001 chr3R_23540001 RAL-409_125b 2648 chr3R 23558351 23558420 chr3R 23560180 23560240 Bari1 17 1827 3.5 2.0 2.8 4.5 1889 chr3R 23558351 intron beat-IV + chr3R 23559296 intron beat-IV + chr3R 23560240 intron beat-IV + chr3R_17_23555001 chr3R_23555001 RAL-409_125b 2649 chr3R 23572745 23572775 chr3R 23572875 23572927 6 146 7.0 6.5 6.8 0.8 182 chr3R 23572745 intron beat-IV + chr3R 23572836 intron beat-IV + chr3R 23572927 intron beat-IV + chr3R_6_23570001 chr3R_23570001 RAL-409_125b 2650 chr3R 23629786 23629835 chr3R 23629908 23629949 11 117 5.0 7.5 6.2 1.5 163 chr3R 23629786 intron CG31145 - chr3R 23629868 intron CG31145 - chr3R 23629949 intron CG31145 - chr3R_11_23625001 chr3R_23625001 RAL-409_125b 2651 chr3R 23629842 23629849 chr3R 23629897 23629964 4 102 4.5 6.5 5.5 0.6 122 chr3R 23629842 intron CG31145 - chr3R 23629903 intron CG31145 - chr3R 23629964 intron CG31145 - chr3R_4_23625001 chr3R_23625001 RAL-409_125b 2652 chr3R 23684664 23684722 chr3R 23685180 23685248 roo 15 519 1.5 4.0 2.8 3.9 584 chr3R 23684664 exon CG18754 + chr3R 23684956 intron CG18754 + chr3R 23685248 exon CG18754 + chr3R_15_23680001 chr3R_23680001 RAL-409_125b 2653 chr3R 23688434 23688505 chr3R 23688565 23688620 11 124 5.0 3.0 4.0 2.2 186 chr3R 23688434 intergenic SPE + chr3R 23688527 intergenic SPE +,CG10254 - chr3R 23688620 intergenic CG10254 -,SPE + chr3R_11_23685001 chr3R_23685001 RAL-409_125b 2654 chr3R 23714668 23714744 chr3R 23714812 23714888 15 141 5.0 3.0 4.0 3.0 220 chr3R 23714668 intron nau - chr3R 23714778 intron nau - chr3R 23714888 intron nau - chr3R_15_23710001 chr3R_23710001 RAL-409_125b 2655 chr3R 23739431 23739450 chr3R 23739565 23739591 6 138 7.5 3.5 5.5 0.9 160 chr3R 23739431 intron Hmgcr + chr3R 23739511 intron Hmgcr + chr3R 23739591 intron Hmgcr + chr3R_6_23735001 chr3R_23735001 RAL-409_125b 2656 chr3R 23739458 23739477 chr3R 23739549 23739621 9 133 3.0 2.0 2.5 2.6 163 chr3R 23739458 intron Hmgcr + chr3R 23739540 intron Hmgcr + chr3R 23739621 intron Hmgcr + chr3R_9_23735001 chr3R_23735001 RAL-409_125b 2657 chr3R 23820603 23820661 chr3R 23820725 23820790 12 130 3.0 6.0 4.5 2.2 187 chr3R 23820603 5` UTR CG34355 + chr3R 23820696 5` UTR CG34355 + chr3R 23820790 5` UTR CG34355 + chr3R_12_23820001 chr3R_23820001 RAL-409_125b 2658 chr3R 23835353 23835427 chr3R 23844554 23844627 roo 9 9199 6.5 5.0 5.8 1.3 9274 chr3R 23835353 intron CG34355 + chr3R 23839990 intron CG34355 + chr3R 23844627 intron CG34355 + chr3R_9_23835001 chr3R_23835001 RAL-409_125b 2659 chr3R 23851038 23851075 chr3R 23858755 23858792 opus 11 7716 8.0 13.0 10.5 1.0 7754 chr3R 23851038 3` UTR CG34355 + chr3R 23854915 intergenic not near genes chr3R 23858792 intergenic not near genes chr3R_11_23850001 chr3R_23850001 RAL-409_125b 2660 chr3R 23944881 23944931 chr3R 23945000 23945051 17 129 3.0 4.0 3.5 3.8 170 chr3R 23944881 intron CG12268 - chr3R 23944966 intron CG12268 - chr3R 23945051 exon CG12268 - chr3R_17_23940001 chr3R_23940001 RAL-409_125b 2661 chr3R 24025555 24025590 chr3R 24025659 24025664 6 104 5.0 7.5 6.2 0.8 109 chr3R 24025555 intron KrT95D - chr3R 24025610 intron KrT95D - chr3R 24025664 intron KrT95D - chr3R_6_24025001 chr3R_24025001 RAL-409_125b 2662 chr3R 24072065 24072099 chr3R 24072532 24072572 jockey 9 480 4.5 8.5 6.5 1.2 507 chr3R 24072065 intron 4EHP - chr3R 24072318 intron 4EHP - chr3R 24072572 intron 4EHP - chr3R_9_24070001 chr3R_24070001 RAL-409_125b 2663 chr3R 24076875 24076940 chr3R 24078387 24078440 hobo 8 1507 5.0 6.5 5.8 1.2 1565 chr3R 24076875 intron 4EHP - chr3R 24077658 intron 4EHP - chr3R 24078440 intron 4EHP - chr3R_8_24075001 chr3R_24075001 RAL-409_125b 2664 chr3R 24080572 24080638 chr3R 24080711 24080778 14 146 7.0 7.5 7.2 1.7 206 chr3R 24080572 intron 4EHP - chr3R 24080675 intron 4EHP - chr3R 24080778 intron 4EHP - chr3R_14_24080001 chr3R_24080001 RAL-409_125b 2665 chr3R 24100412 24100582 chr3R 24100557 24100856 26 208 0.0 0.0 0.0 26.0 444 chr3R 24100412 intron 4EHP - chr3R 24100634 intron 4EHP - chr3R 24100856 intron 4EHP - chr3R_26_24100001 chr3R_24100001 RAL-409_125b 2666 chr3R 24100585 24100613 chr3R 24100859 24100882 6 273 0.0 10.5 5.2 1.0 297 chr3R 24100585 intron 4EHP - chr3R 24100734 intron 4EHP - chr3R 24100882 intron 4EHP - chr3R_6_24100001 chr3R_24100001 RAL-409_125b 2667 chr3R 24207180 24207236 chr3R 24212306 24212362 flea 8 5123 6.5 10.5 8.5 0.8 5182 chr3R 24207180 intron twin - chr3R 24209771 intron twin - chr3R 24212362 intron twin - chr3R_8_24205001 chr3R_24205001 RAL-409_125b 2668 chr3R 24236454 24236485 chr3R 24236565 24236594 5 115 17.0 19.5 18.2 0.3 140 chr3R 24236454 exon mask + chr3R 24236524 intron mask + chr3R 24236594 intron mask + chr3R_5_24235001 chr3R_24235001 RAL-409_125b 2669 chr3R 24359590 24359625 chr3R 24359728 24359763 6 136 5.5 15.0 10.2 0.5 173 chr3R 24359590 intron CG18528 - chr3R 24359676 intron CG18528 - chr3R 24359763 intron CG18528 - chr3R_6_24355001 chr3R_24355001 RAL-409_125b 2670 chr3R 24431559 24431612 chr3R 24431688 24431741 12 128 9.5 0.5 5.0 2.0 182 chr3R 24431559 intron nAChRalpha1 - chr3R 24431650 intron nAChRalpha1 - chr3R 24431741 intron nAChRalpha1 - chr3R_12_24430001 chr3R_24430001 RAL-409_125b 2671 chr3R 24433426 24433503 chr3R 24433555 24433625 18 127 0.5 6.0 3.2 4.3 199 chr3R 24433426 intron nAChRalpha1 - chr3R 24433526 intron nAChRalpha1 - chr3R 24433625 intron nAChRalpha1 - chr3R_18_24430001 chr3R_24430001 RAL-409_125b 2672 chr3R 24493236 24493254 chr3R 24493512 24493533 BS 8 277 13.5 7.5 10.5 0.7 297 chr3R 24493236 intergenic not near genes chr3R 24493384 intergenic not near genes chr3R 24493533 intergenic not near genes chr3R_8_24490001 chr3R_24490001 RAL-409_125b 2673 chr3R 24493256 24493298 chr3R 24493509 24493576 BS 14 274 9.0 7.0 8.0 1.6 320 chr3R 24493256 intergenic not near genes chr3R 24493416 intergenic not near genes chr3R 24493576 intergenic not near genes chr3R_14_24490001 chr3R_24490001 RAL-409_125b 2674 chr3R 24523854 24523926 chr3R 24523990 24524062 13 134 2.0 3.0 2.5 3.7 208 chr3R 24523854 intergenic CG13622 - chr3R 24523958 intergenic CG13622 - chr3R 24524062 intergenic CG13622 - chr3R_13_24520001 chr3R_24520001 RAL-409_125b 2675 chr3R 24594627 24594665 chr3R 24594917 24594955 pogo 8 289 4.5 8.0 6.2 1.1 328 chr3R 24594627 intron mld + chr3R 24594791 intron mld + chr3R 24594955 intron mld + chr3R_8_24590001 chr3R_24590001 RAL-409_125b 2676 chr3R 24605513 24605547 chr3R 24605647 24605657 7 132 15.5 11.5 13.5 0.5 144 chr3R 24605513 intron mld + chr3R 24605585 intron mld + chr3R 24605657 intron mld + chr3R_7_24605001 chr3R_24605001 RAL-409_125b 2677 chr3R 24624333 24624396 chr3R 24624472 24624528 15 137 5.5 8.5 7.0 1.9 195 chr3R 24624333 intron Syx18 - chr3R 24624430 intron Syx18 - chr3R 24624528 exon Syx18 - chr3R_15_24620001 chr3R_24620001 RAL-409_125b 2678 chr3R 24670138 24670198 chr3R 24670262 24670332 19 132 0.0 3.0 1.5 7.6 194 chr3R 24670138 intron slo + chr3R 24670235 intron slo + chr3R 24670332 intron slo + chr3R_19_24670001 chr3R_24670001 RAL-409_125b 2679 chr3R 24671181 24671253 chr3R 24671297 24671373 15 110 5.0 5.5 5.2 2.4 192 chr3R 24671181 intron slo + chr3R 24671277 intron slo + chr3R 24671373 intron slo + chr3R_15_24670001 chr3R_24670001 RAL-409_125b 2680 chr3R 24728302 24728357 chr3R 24728525 24728575 13 221 3.5 5.5 4.5 2.4 273 chr3R 24728302 exon tok + chr3R 24728438 intron tok + chr3R 24728575 intron tok + chr3R_13_24725001 chr3R_24725001 RAL-409_125b 2681 chr3R 24730068 24730074 chr3R 24732473 24732499 Doc 4 2420 5.0 0.0 2.5 1.1 2431 chr3R 24730068 intron tok + chr3R 24731284 intron tok + chr3R 24732499 intron tok + chr3R_4_24730001 chr3R_24730001 RAL-409_125b 2682 chr3R 24742986 24743059 chr3R 24743121 24743182 6 133 1.5 3.5 2.5 1.7 196 chr3R 24742986 intron tok + chr3R 24743084 intron tok + chr3R 24743182 exon tok + chr3R_6_24740001 chr3R_24740001 RAL-409_125b 2683 chr3R 24789933 24789992 chr3R 24790128 24790172 15 188 5.0 5.0 5.0 2.5 239 chr3R 24789933 intron,5` UTR Ets96B +,CG13634 - chr3R 24790052 intron,5` UTR Ets96B +,CG13634 - chr3R 24790172 intron Ets96B + chr3R_15_24790001 chr3R_24790001 RAL-409_125b 2684 chr3R 24854838 24854876 chr3R 24854970 24855008 8 131 8.0 4.5 6.2 1.1 170 chr3R 24854838 3` UTR,3` UTR nct +,HdacX - chr3R 24854923 3` UTR HdacX - chr3R 24855008 3` UTR HdacX - chr3R_8_24850001 chr3R_24850001 RAL-409_125b 2685 chr3R 24912452 24912510 chr3R 24912569 24912641 9 129 8.5 4.5 6.5 1.2 189 chr3R 24912452 intergenic not near genes chr3R 24912546 intergenic CR44267 + chr3R 24912641 intergenic CR44267 + chr3R_9_24910001 chr3R_24910001 RAL-409_125b 2686 chr3R 24927091 24927105 chr3R 24931922 24931930 Doc 6 4836 6.5 5.0 5.8 0.9 4839 chr3R 24927091 intergenic Trf4-2 + chr3R 24929510 intergenic not near genes chr3R 24931930 intergenic CG11771 + chr3R_6_24925001 chr3R_24925001 RAL-409_125b 2687 chr3R 24927110 24927139 chr3R 24931920 24931974 Doc 12 4835 3.0 4.5 3.8 2.5 4864 chr3R 24927110 intergenic Trf4-2 + chr3R 24929542 intergenic not near genes chr3R 24931974 intergenic CG11771 + chr3R_12_24925001 chr3R_24925001 RAL-409_125b 2688 chr3R 24938337 24938353 chr3R 24938493 24938509 5 156 7.5 11.5 9.5 0.5 172 chr3R 24938337 intergenic Osbp -,ssh - chr3R 24938423 intergenic Osbp -,ssh - chr3R 24938509 intergenic ssh -,Osbp - chr3R_5_24935001 chr3R_24935001 RAL-409_125b 2689 chr3R 25004895 25004916 chr3R 25005028 25005049 8 130 5.0 5.5 5.2 1.3 154 chr3R 25004895 intron tnc + chr3R 25004972 intron tnc + chr3R 25005049 intron tnc + chr3R_8_25000001 chr3R_25000001 RAL-409_125b 2690 chr3R 25136381 25136420 chr3R 25136511 25136550 7 129 5.5 6.0 5.8 1.0 169 chr3R 25136381 3` UTR Bili + chr3R 25136466 3` UTR Bili + chr3R 25136550 3` UTR Bili + chr3R_7_25135001 chr3R_25135001 RAL-409_125b 2691 chr3R 25157663 25157671 chr3R 25157777 25157792 4 122 4.5 10.0 7.2 0.5 129 chr3R 25157663 intergenic not near genes chr3R 25157728 intergenic not near genes chr3R 25157792 intergenic not near genes chr3R_4_25155001 chr3R_25155001 RAL-409_125b 2692 chr3R 25209533 25209624 chr3R 25209678 25209756 14 128 0.5 6.0 3.2 3.3 223 chr3R 25209533 intron CG13654 + chr3R 25209644 intron CG13654 + chr3R 25209756 intron CG13654 + chr3R_14_25205001 chr3R_25205001 RAL-409_125b 2693 chr3R 25235710 25235834 chr3R 25235850 25235964 11 130 5.0 5.0 5.0 1.8 254 chr3R 25235710 intergenic CG10420 - chr3R 25235837 intergenic CG10420 - chr3R 25235964 intergenic CG10420 - chr3R_11_25235001 chr3R_25235001 RAL-409_125b 2694 chr3R 25239188 25239238 chr3R 25239349 25239394 4 158 24.0 19.5 21.8 0.2 206 chr3R 25239188 intergenic CG11852 + chr3R 25239291 intergenic CG11852 + chr3R 25239394 intergenic CG11852 + chr3R_4_25235001 chr3R_25235001 RAL-409_125b 2695 chr3R 25267737 25267746 chr3R 25267863 25267864 5 124 3.0 0.0 1.5 2.0 127 chr3R 25267737 3` UTR,intron RIOK2 +,CR45214 - chr3R 25267800 intron CR45214 - chr3R 25267864 intron CR45214 - chr3R_5_25265001 chr3R_25265001 RAL-409_125b 2696 chr3R 25302139 25302197 chr3R 25302306 25302379 17 169 37.5 30.0 33.8 0.5 240 chr3R 25302139 exon CG13659 + chr3R 25302259 exon CG13659 + chr3R 25302379 intergenic CG13659 +,CG31370 + chr3R_17_25300001 chr3R_25300001 RAL-409_125b 2697 chr3R 25368429 25368504 chr3R 25368597 25368671 12 167 4.5 0.0 2.2 3.8 242 chr3R 25368429 intron Fur1 - chr3R 25368550 intron Fur1 - chr3R 25368671 intron Fur1 - chr3R_12_25365001 chr3R_25365001 RAL-409_125b 2698 chr3R 25377049 25377064 chr3R 25377365 25377380 6 315 16.0 7.5 11.8 0.5 331 chr3R 25377049 intron Fur1 - chr3R 25377214 intron Fur1 - chr3R 25377380 intron Fur1 - chr3R_6_25375001 chr3R_25375001 RAL-409_125b 2699 chr3R 25377070 25377107 chr3R 25377361 25377423 10 309 10.0 7.0 8.5 1.1 353 chr3R 25377070 intron Fur1 - chr3R 25377246 intron Fur1 - chr3R 25377423 intron Fur1 - chr3R_10_25375001 chr3R_25375001 RAL-409_125b 2700 chr3R 25411741 25411791 chr3R 25411887 25411944 15 146 4.0 11.5 7.8 1.7 203 chr3R 25411741 intron Fur1 - chr3R 25411842 intron Fur1 - chr3R 25411944 intron Fur1 - chr3R_15_25410001 chr3R_25410001 RAL-409_125b 2701 chr3R 25422023 25422095 chr3R 25422154 25422243 19 133 4.0 1.5 2.8 5.0 220 chr3R 25422023 intron Fur1 - chr3R 25422133 intron Fur1 - chr3R 25422243 intron Fur1 - chr3R_19_25420001 chr3R_25420001 RAL-409_125b 2702 chr3R 25431393 25431435 chr3R 25431529 25431571 12 135 5.0 7.0 6.0 1.7 178 chr3R 25431393 intron Fur1 - chr3R 25431482 intron Fur1 - chr3R 25431571 intron Fur1 - chr3R_12_25430001 chr3R_25430001 RAL-409_125b 2703 chr3R 25464108 25464168 chr3R 25464366 25464426 16 257 7.0 7.5 7.2 2.0 318 chr3R 25464108 intron Fur1 - chr3R 25464267 intron Fur1 - chr3R 25464426 intron Fur1 - chr3R_16_25460001 chr3R_25460001 RAL-409_125b 2704 chr3R 25465016 25465087 chr3R 25465133 25465214 4 124 4.5 4.0 4.2 0.8 198 chr3R 25465016 intron Fur1 - chr3R 25465115 intron Fur1 - chr3R 25465214 intron Fur1 - chr3R_4_25465001 chr3R_25465001 RAL-409_125b 2705 chr3R 25521549 25521616 chr3R 25521676 25521736 7 132 5.0 0.5 2.8 1.8 187 chr3R 25521549 intron msi + chr3R 25521642 intron msi + chr3R 25521736 intron msi + chr3R_7_25520001 chr3R_25520001 RAL-409_125b 2706 chr3R 25526213 25526281 chr3R 25526335 25526402 15 122 7.0 3.5 5.2 2.4 189 chr3R 25526213 intron msi + chr3R 25526308 intron msi + chr3R 25526402 intron msi + chr3R_15_25525001 chr3R_25525001 RAL-409_125b 2707 chr3R 25528008 25528045 chr3R 25528150 25528187 8 139 6.5 7.5 7.0 1.0 179 chr3R 25528008 intron msi + chr3R 25528098 intron msi + chr3R 25528187 intron msi + chr3R_8_25525001 chr3R_25525001 RAL-409_125b 2708 chr3R 25571841 25571867 chr3R 25571979 25572002 6 136 5.0 4.5 4.8 1.0 161 chr3R 25571841 intron msi + chr3R 25571922 intron msi + chr3R 25572002 intron msi + chr3R_6_25570001 chr3R_25570001 RAL-409_125b 2709 chr3R 25716336 25716400 chr3R 25716464 25716528 13 126 6.0 7.0 6.5 1.7 192 chr3R 25716336 intron LpR2 - chr3R 25716432 intron LpR2 - chr3R 25716528 intron LpR2 - chr3R_13_25715001 chr3R_25715001 RAL-409_125b 2710 chr3R 25725797 25725851 chr3R 25735002 25735061 roo 10 9208 5.5 6.0 5.8 1.5 9264 chr3R 25725797 intron LpR2 - chr3R 25730429 intron LpR2 - chr3R 25735061 intron LpR2 - chr3R_10_25730001 chr3R_25730001 RAL-409_125b 2711 chr3R 25764051 25764072 chr3R 25764180 25764184 5 124 6.5 0.0 3.2 1.2 133 chr3R 25764051 intergenic not near genes chr3R 25764118 intergenic not near genes chr3R 25764184 intergenic not near genes chr3R_5_25760001 chr3R_25760001 RAL-409_125b 2712 chr3R 25765847 25765904 chr3R 25765959 25766005 18 108 6.0 7.0 6.5 2.4 158 chr3R 25765847 intergenic not near genes chr3R 25765926 intergenic not near genes chr3R 25766005 intergenic not near genes chr3R_18_25765001 chr3R_25765001 RAL-409_125b 2713 chr3R 25801229 25801293 chr3R 25802253 25802296 12 1023 2.5 4.5 3.5 2.7 1067 chr3R 25801229 intergenic not near genes chr3R 25801762 intergenic not near genes chr3R 25802296 intergenic not near genes chr3R_12_25800001 chr3R_25800001 RAL-409_125b 2714 chr3R 25832659 25832702 chr3R 25841883 25841921 roo 16 9227 8.5 5.5 7.0 2.0 9262 chr3R 25832659 exon alpha4GT2 + chr3R 25837290 intron alpha4GT2 + chr3R 25841921 exon alpha4GT2 + chr3R_16_25835001 chr3R_25835001 RAL-409_125b 2715 chr3R 25832704 25832721 chr3R 25841871 25841933 roo 7 9204 4.5 4.0 4.2 1.3 9229 chr3R 25832704 exon alpha4GT2 + chr3R 25837318 intron alpha4GT2 + chr3R 25841933 exon alpha4GT2 + chr3R_7_25835001 chr3R_25835001 RAL-409_125b 2716 chr3R 25843613 25843661 chr3R 25843782 25843826 14 174 2.0 6.0 4.0 2.8 213 chr3R 25843613 intergenic CR45653 + chr3R 25843720 intergenic CR45653 + chr3R 25843826 intergenic CR45653 + chr3R_14_25840001 chr3R_25840001 RAL-409_125b 2717 chr3R 25900886 25900950 chr3R 25903553 25903624 6 2669 30.5 29.5 30.0 0.2 2738 chr3R 25900886 exon CG31091 + chr3R 25902255 intergenic CG31091 +,CG31089 + chr3R 25903624 exon,intron CG31089 +,CR43259 - chr3R_6_25900001 chr3R_25900001 RAL-409_125b 2718 chr3R 25920812 25920880 chr3R 25920943 25921013 11 130 8.0 4.5 6.2 1.5 201 chr3R 25920812 exon CG42235 + chr3R 25920912 3` UTR CG42235 + chr3R 25921013 3` UTR CG42235 + chr3R_11_25920001 chr3R_25920001 RAL-409_125b 2719 chr3R 25927463 25927533 chr3R 25927595 25927658 14 130 4.5 1.5 3.0 3.5 195 chr3R 25927463 intron CCAP-R - chr3R 25927560 intron CCAP-R - chr3R 25927658 intron CCAP-R - chr3R_14_25925001 chr3R_25925001 RAL-409_125b 2720 chr3R 25951954 25952035 chr3R 25952154 25952214 10 185 0.0 6.0 3.0 2.5 260 chr3R 25951954 intron CCAP-R - chr3R 25952084 intron CCAP-R - chr3R 25952214 intron CCAP-R - chr3R_10_25950001 chr3R_25950001 RAL-409_125b 2721 chr3R 26013824 26013863 chr3R 26013934 26013993 15 127 9.0 4.5 6.8 1.9 169 chr3R 26013824 intergenic not near genes chr3R 26013908 intergenic not near genes chr3R 26013993 intergenic not near genes chr3R_15_26010001 chr3R_26010001 RAL-409_125b 2722 chr3R 26088557 26088609 chr3R 26088694 26088756 11 145 4.5 7.5 6.0 1.6 199 chr3R 26088557 intron dys - chr3R 26088656 intron dys - chr3R 26088756 intron dys - chr3R_11_26085001 chr3R_26085001 RAL-409_125b 2723 chr3R 26093795 26093869 chr3R 26093923 26093997 15 124 7.0 3.0 5.0 2.5 202 chr3R 26093795 intron dys - chr3R 26093896 intron dys - chr3R 26093997 intron dys - chr3R_15_26090001 chr3R_26090001 RAL-409_125b 2724 chr3R 26104076 26104081 chr3R 26105105 26105110 5 1029 28.0 38.0 33.0 0.1 1034 chr3R 26104076 intergenic not near genes chr3R 26104593 intergenic not near genes chr3R 26105110 intergenic not near genes chr3R_5_26100001 chr3R_26100001 RAL-409_125b 2725 chr3R 26104072 26104138 chr3R 26105111 26105167 10 1032 34.0 36.5 35.2 0.3 1095 chr3R 26104072 intergenic not near genes chr3R 26104620 intergenic not near genes chr3R 26105167 intergenic not near genes chr3R_10_26100001 chr3R_26100001 RAL-409_125b 2726 chr3R 26121919 26121975 chr3R 26122066 26122097 4 141 8.0 10.5 9.2 0.4 178 chr3R 26121919 intron CG31324 + chr3R 26122008 intron CG31324 + chr3R 26122097 intron CG31324 + chr3R_4_26120001 chr3R_26120001 RAL-409_125b 2727 chr3R 26122434 26122467 chr3R 26122549 26122593 8 122 5.5 8.0 6.8 1.0 159 chr3R 26122434 intron CG31324 + chr3R 26122514 intron CG31324 + chr3R 26122593 intron CG31324 + chr3R_8_26120001 chr3R_26120001 RAL-409_125b 2728 chr3R 26126501 26126567 chr3R 26126637 26126703 19 135 6.0 4.0 5.0 3.2 202 chr3R 26126501 intron CG31324 + chr3R 26126602 intron CG31324 + chr3R 26126703 intron,5` UTR CG31324 +,CG14556 + chr3R_19_26125001 chr3R_26125001 RAL-409_125b 2729 chr3R 26143184 26143238 chr3R 26143466 26143520 6 282 8.0 7.0 7.5 0.7 336 chr3R 26143184 intergenic not near genes chr3R 26143352 intergenic not near genes chr3R 26143520 intergenic not near genes chr3R_6_26140001 chr3R_26140001 RAL-409_125b 2730 chr3R 26235482 26235496 chr3R 26235608 26235625 4 128 7.0 11.5 9.2 0.4 143 chr3R 26235482 5` UTR CR42745 + chr3R 26235554 5` UTR CR42745 + chr3R 26235625 intron CR42745 + chr3R_4_26235001 chr3R_26235001 RAL-409_125b 2731 chr3R 26235508 26235516 chr3R 26235603 26235648 5 120 5.0 11.0 8.0 0.6 140 chr3R 26235508 5` UTR CR42745 + chr3R 26235578 5` UTR CR42745 + chr3R 26235648 intron CR42745 + chr3R_5_26235001 chr3R_26235001 RAL-409_125b 2732 chr3R 26255966 26256010 chr3R 26256097 26256136 5 128 9.0 9.0 9.0 0.5 170 chr3R 26255966 intron Ald - chr3R 26256051 intron Ald - chr3R 26256136 intron Ald - chr3R_5_26255001 chr3R_26255001 RAL-409_125b 2733 chr3R 26294680 26294739 chr3R 26294805 26294846 17 123 5.0 7.0 6.0 2.4 166 chr3R 26294680 intergenic not near genes chr3R 26294763 intergenic not near genes chr3R 26294846 intergenic not near genes chr3R_17_26290001 chr3R_26290001 RAL-409_125b 2734 chr3R 26310601 26310654 chr3R 26310721 26310765 11 121 4.0 6.0 5.0 1.8 164 chr3R 26310601 intergenic not near genes chr3R 26310683 intergenic not near genes chr3R 26310765 intergenic not near genes chr3R_11_26310001 chr3R_26310001 RAL-409_125b 2735 chr3R 26326647 26326664 chr3R 26326779 26326797 4 130 5.5 4.0 4.8 0.7 150 chr3R 26326647 intron CG33970 + chr3R 26326722 intron CG33970 + chr3R 26326797 intron CG33970 + chr3R_4_26325001 chr3R_26325001 RAL-409_125b 2736 chr3R 26342974 26343048 chr3R 26343540 26343614 19 563 3.0 5.0 4.0 3.8 640 chr3R 26342974 intron CG33970 + chr3R 26343294 intron CG33970 + chr3R 26343614 intron CG33970 + chr3R_19_26340001 chr3R_26340001 RAL-409_125b 2737 chr3R 26376306 26376346 chr3R 26385491 26385570 roo 5 9206 7.5 0.0 3.8 1.0 9264 chr3R 26376306 intergenic not near genes chr3R 26380938 intergenic not near genes chr3R 26385570 intergenic not near genes chr3R_5_26380001 chr3R_26380001 RAL-409_125b 2738 chr3R 26419589 26419658 chr3R 26419720 26419779 9 123 5.5 6.0 5.8 1.3 190 chr3R 26419589 intergenic not near genes chr3R 26419684 intergenic not near genes chr3R 26419779 intergenic not near genes chr3R_9_26415001 chr3R_26415001 RAL-409_125b 2739 chr3R 26450499 26450540 chr3R 26450621 26450688 13 138 3.5 6.5 5.0 2.2 189 chr3R 26450499 exon Hex-t1 + chr3R 26450594 intergenic Hex-t1 +,Hex-t2 + chr3R 26450688 exon Hex-t2 + chr3R_13_26450001 chr3R_26450001 RAL-409_125b 2740 chr3R 26510477 26510535 chr3R 26519582 26519629 roo 14 9104 1.5 7.5 4.5 2.5 9152 chr3R 26510477 intron plum - chr3R 26515053 intron plum - chr3R 26519629 intron,5` UTR plum -,CR45226 + chr3R_14_26515001 chr3R_26515001 RAL-409_125b 2741 chr3R 26553163 26553237 chr3R 26553717 26553781 12 550 5.5 4.5 5.0 2.0 618 chr3R 26553163 intron scrib + chr3R 26553472 intron scrib + chr3R 26553781 intron scrib + chr3R_12_26550001 chr3R_26550001 RAL-409_125b 2742 chr3R 26558300 26558354 chr3R 26565643 26565680 Stalker4 10 7345 4.5 3.5 4.0 2.0 7380 chr3R 26558300 intron scrib + chr3R 26561990 intron scrib + chr3R 26565680 intron scrib + chr3R_10_26560001 chr3R_26560001 RAL-409_125b 2743 chr3R 26607698 26607764 chr3R 26607819 26607890 12 119 4.0 6.5 5.2 1.9 192 chr3R 26607698 5` UTR CR44951 + chr3R 26607794 5` UTR CR44951 + chr3R 26607890 5` UTR CR44951 + chr3R_12_26605001 chr3R_26605001 RAL-409_125b 2744 chr3R 26641608 26641652 chr3R 26641735 26641759 18 125 7.0 7.0 7.0 2.2 151 chr3R 26641608 intergenic not near genes chr3R 26641684 intergenic not near genes chr3R 26641759 intergenic not near genes chr3R_18_26640001 chr3R_26640001 RAL-409_125b 2745 chr3R 26642688 26642747 chr3R 26643131 26643191 jockey 18 441 11.5 7.5 9.5 1.7 503 chr3R 26642688 intergenic not near genes chr3R 26642940 intergenic not near genes chr3R 26643191 intergenic not near genes chr3R_18_26640001 chr3R_26640001 RAL-409_125b 2746 chr3R 26660611 26660678 chr3R 26660740 26660772 16 118 6.5 11.5 9.0 1.6 161 chr3R 26660611 intron beat-VII - chr3R 26660692 intron beat-VII - chr3R 26660772 intron beat-VII - chr3R_16_26660001 chr3R_26660001 RAL-409_125b 2747 chr3R 26710778 26710854 chr3R 26710912 26710978 14 130 6.5 5.5 6.0 2.0 200 chr3R 26710778 intron amon - chr3R 26710878 intron amon - chr3R 26710978 intron amon - chr3R_14_26710001 chr3R_26710001 RAL-409_125b 2748 chr3R 26770203 26770263 chr3R 26770325 26770390 21 126 4.5 4.5 4.5 3.8 187 chr3R 26770203 intergenic CR45563 + chr3R 26770296 intergenic CR45563 + chr3R 26770390 intergenic not near genes chr3R_21_26770001 chr3R_26770001 RAL-409_125b 2749 chr3R 26789617 26789625 chr3R 26789746 26789754 5 129 1.5 5.0 3.2 1.2 137 chr3R 26789617 intergenic not near genes chr3R 26789686 intergenic not near genes chr3R 26789754 intergenic not near genes chr3R_5_26785001 chr3R_26785001 RAL-409_125b 2750 chr3R 26810510 26810564 chr3R 26811045 26811089 roo 7 532 7.0 10.0 8.5 0.7 579 chr3R 26810510 intron Tl + chr3R 26810800 intron Tl + chr3R 26811089 intron Tl + chr3R_7_26810001 chr3R_26810001 RAL-409_125b 2751 chr3R 26903198 26903254 chr3R 26903304 26903356 14 105 9.0 9.0 9.0 1.4 158 chr3R 26903198 intron T48 + chr3R 26903277 intron T48 + chr3R 26903356 intron T48 + chr3R_14_26900001 chr3R_26900001 RAL-409_125b 2752 chr3R 26917261 26917325 chr3R 26917389 26917458 13 129 3.0 9.0 6.0 1.9 197 chr3R 26917261 intron sda + chr3R 26917360 intron sda + chr3R 26917458 intron sda + chr3R_13_26915001 chr3R_26915001 RAL-409_125b 2753 chr3R 26921330 26921378 chr3R 26921578 26921626 15 248 12.5 6.5 9.5 1.4 296 chr3R 26921330 intron sda + chr3R 26921478 intron sda + chr3R 26921626 intron sda + chr3R_15_26920001 chr3R_26920001 RAL-409_125b 2754 chr3R 26925489 26925552 chr3R 26925632 26925683 7 134 0.0 3.0 1.5 2.8 194 chr3R 26925489 intron sda + chr3R 26925586 intron sda + chr3R 26925683 intron sda + chr3R_7_26925001 chr3R_26925001 RAL-409_125b 2755 chr3R 26953447 26953472 chr3R 26953562 26953598 8 125 8.0 8.5 8.2 0.9 151 chr3R 26953447 intron CG6330 - chr3R 26953522 intron CG6330 - chr3R 26953598 intron CG6330 - chr3R_8_26950001 chr3R_26950001 RAL-409_125b 2756 chr3R 27007359 27007429 chr3R 27016544 27016594 roo 14 9172 4.0 3.5 3.8 2.9 9235 chr3R 27007359 intron RYa-R + chr3R 27011976 intron RYa-R + chr3R 27016594 intron RYa-R + chr3R_14_27010001 chr3R_27010001 RAL-409_125b 2757 chr3R 27027636 27027700 chr3R 27027765 27027832 14 130 5.0 2.0 3.5 3.1 196 chr3R 27027636 intron RYa-R + chr3R 27027734 intron RYa-R + chr3R 27027832 intron RYa-R + chr3R_14_27025001 chr3R_27025001 RAL-409_125b 2758 chr3R 27077077 27077118 chr3R 27077196 27077223 5 113 21.0 22.5 21.8 0.2 146 chr3R 27077077 intron CG14257 + chr3R 27077150 intron CG14257 + chr3R 27077223 intron CG14257 + chr3R_5_27075001 chr3R_27075001 RAL-409_125b 2759 chr3R 27108732 27108800 chr3R 27108869 27108912 14 131 5.5 4.5 5.0 2.3 180 chr3R 27108732 3` UTR gb - chr3R 27108822 3` UTR gb - chr3R 27108912 3` UTR gb - chr3R_14_27105001 chr3R_27105001 RAL-409_125b 2760 chr3R 27140471 27140532 chr3R 27148131 27148187 412 13 7657 11.0 5.5 8.2 1.4 7716 chr3R 27140471 intron CG6051 - chr3R 27144329 intron CG6051 - chr3R 27148187 intron CG6051 - chr3R_13_27140001 chr3R_27140001 RAL-409_125b 2761 chr3R 27292271 27292298 chr3R 27292404 27292444 5 143 7.0 5.5 6.2 0.7 173 chr3R 27292271 intergenic CG3348 - chr3R 27292358 intergenic CG3348 - chr3R 27292444 intergenic CG3348 - chr3R_5_27290001 chr3R_27290001 RAL-409_125b 2762 chr3R 27329430 27329492 chr3R 27329557 27329618 10 122 6.5 2.5 4.5 1.8 188 chr3R 27329430 intergenic CG3330 - chr3R 27329524 intergenic CG3330 - chr3R 27329618 intergenic CG3330 - chr3R_10_27325001 chr3R_27325001 RAL-409_125b 2763 chr3R 27342756 27342808 chr3R 27351387 27351439 Tirant 8 8627 8.5 4.5 6.5 1.1 8683 chr3R 27342756 intron CG42534 + chr3R 27347098 intron CG42534 + chr3R 27351439 intron CG42534 + chr3R_8_27345001 chr3R_27345001 RAL-409_125b 2764 chr3R 27377438 27377494 chr3R 27377568 27377632 18 121 5.5 7.0 6.2 2.5 194 chr3R 27377438 3` UTR side - chr3R 27377535 3` UTR side - chr3R 27377632 3` UTR side - chr3R_18_27375001 chr3R_27375001 RAL-409_125b 2765 chr3R 27457817 27457895 chr3R 27457960 27458022 7 136 3.5 2.0 2.8 1.8 205 chr3R 27457817 intergenic not near genes chr3R 27457920 intergenic not near genes chr3R 27458022 intergenic not near genes chr3R_7_27455001 chr3R_27455001 RAL-409_125b 2766 chr3R 27496543 27496599 chr3R 27496698 27496754 13 151 6.0 6.5 6.2 1.8 211 chr3R 27496543 intergenic not near genes chr3R 27496648 intergenic not near genes chr3R 27496754 intergenic not near genes chr3R_13_27495001 chr3R_27495001 RAL-409_125b 2767 chr3R 27595008 27595083 chr3R 27595141 27595207 14 131 2.0 9.0 5.5 2.2 199 chr3R 27595008 intron CG5639 - chr3R 27595108 intron CG5639 - chr3R 27595207 intron CG5639 - chr3R_14_27595001 chr3R_27595001 RAL-409_125b 2768 chr3R 27639259 27639333 chr3R 27639786 27639856 10 512 6.0 8.5 7.2 1.2 597 chr3R 27639259 3` UTR Mtl + chr3R 27639558 3` UTR Mtl + chr3R 27639856 3` UTR Mtl + chr3R_10_27635001 chr3R_27635001 RAL-409_125b 2769 chr3R 27646196 27646255 chr3R 27646308 27646345 18 108 5.5 6.0 5.8 2.6 149 chr3R 27646196 exon tau - chr3R 27646270 intron tau - chr3R 27646345 exon tau - chr3R_18_27645001 chr3R_27645001 RAL-409_125b 2770 chr3R 27648561 27648571 chr3R 27648684 27648694 4 122 16.0 0.0 8.0 0.4 133 chr3R 27648561 intron tau - chr3R 27648628 intron tau - chr3R 27648694 intron tau - chr3R_4_27645001 chr3R_27645001 RAL-409_125b 2771 chr3R 27706730 27706784 chr3R 27706857 27706904 12 124 9.5 8.5 9.0 1.2 174 chr3R 27706730 5` UTR CG12428 - chr3R 27706817 intergenic CG12428 -,CG12877 + chr3R 27706904 intergenic CG12428 -,CG12877 + chr3R_12_27705001 chr3R_27705001 RAL-409_125b 2772 chr3R 27725503 27725582 chr3R 27731003 27731075 I-element 4 5496 0.5 4.5 2.5 1.1 5572 chr3R 27725503 intergenic not near genes chr3R 27728289 intergenic not near genes chr3R 27731075 intergenic not near genes chr3R_4_27725001 chr3R_27725001 RAL-409_125b 2773 chr3R 27791635 27791648 chr3R 27794811 27794820 Rt1c 4 3174 10.5 10.5 10.5 0.3 3185 chr3R 27791635 intron CG34353 - chr3R 27793228 intron CG34353 - chr3R 27794820 intron CG34353 - chr3R_4_27790001 chr3R_27790001 RAL-409_125b 2774 chr3R 27799886 27799954 chr3R 27800018 27800086 16 131 6.5 4.5 5.5 2.5 200 chr3R 27799886 intron CG34353 - chr3R 27799986 intron CG34353 - chr3R 27800086 intron CG34353 - chr3R_16_27795001 chr3R_27795001 RAL-409_125b 2775 chr3R 27856731 27856770 chr3R 27858248 27858298 hopper2 11 1524 8.5 4.0 6.2 1.5 1567 chr3R 27856731 intron CG34353 - chr3R 27857514 intron CG34353 - chr3R 27858298 intron CG34353 - chr3R_11_27855001 chr3R_27855001 RAL-409_125b 2776 chr3R 27862933 27862955 chr3R 27868283 27868310 Transpac 6 5351 8.0 5.0 6.5 0.8 5377 chr3R 27862933 intron CG34353 - chr3R 27865622 intron CG34353 - chr3R 27868310 intron CG34353 - chr3R_6_27865001 chr3R_27865001 RAL-409_125b 2777 chr3R 27862957 27862975 chr3R 27868271 27868298 Transpac 6 5336 6.0 4.0 5.0 1.0 5341 chr3R 27862957 intron CG34353 - chr3R 27865628 intron CG34353 - chr3R 27868298 intron CG34353 - chr3R_6_27865001 chr3R_27865001 RAL-409_125b 2778 chr3R 27875659 27875721 chr3R 27882764 27882821 297 11 7102 3.5 9.5 6.5 1.5 7162 chr3R 27875659 intron CG34353 - chr3R 27879240 intron CG34353 - chr3R 27882821 intron CG34353 - chr3R_11_27875001 chr3R_27875001 RAL-409_125b 2779 chr3R 27992352 27992418 chr3R 27992479 27992530 19 124 5.0 7.0 6.0 2.7 178 chr3R 27992352 intergenic not near genes chr3R 27992441 intergenic not near genes chr3R 27992530 intergenic not near genes chr3R_19_27990001 chr3R_27990001 RAL-409_125b 2780 chr3R 27999366 27999430 chr3R 27999490 27999555 15 129 4.5 3.0 3.8 3.1 189 chr3R 27999366 intergenic not near genes chr3R 27999460 intergenic not near genes chr3R 27999555 intergenic not near genes chr3R_15_27995001 chr3R_27995001 RAL-409_125b 2781 chr3R 28068498 28068519 chr3R 28073946 28073991 I-element 7 5474 0.5 5.0 2.8 1.8 5493 chr3R 28068498 intron CG34362 + chr3R 28071244 intron CG34362 + chr3R 28073991 intron CG34362 + chr3R_7_28070001 chr3R_28070001 RAL-409_125b 2782 chr3R 28097635 28097666 chr3R 28097782 28097821 8 151 7.5 6.0 6.8 1.0 186 chr3R 28097635 intergenic not near genes chr3R 28097728 intergenic not near genes chr3R 28097821 intergenic not near genes chr3R_8_28095001 chr3R_28095001 RAL-409_125b 2783 chr3R 28139820 28139880 chr3R 28140643 28140682 10 825 7.0 6.5 6.8 1.3 862 chr3R 28139820 intergenic not near genes chr3R 28140251 intergenic not near genes chr3R 28140682 intergenic not near genes chr3R_10_28140001 chr3R_28140001 RAL-409_125b 2784 chr3R 28173626 28173683 chr3R 28181106 28181163 mdg1 19 7478 7.5 6.0 6.8 2.4 7537 chr3R 28173626 intron CG34354 + chr3R 28177394 intron CG34354 + chr3R 28181163 intron CG34354 + chr3R_19_28175001 chr3R_28175001 RAL-409_125b 2785 chr3R 28201822 28201849 chr3R 28201926 28201963 5 117 4.0 8.5 6.2 0.7 141 chr3R 28201822 intron CG34354 + chr3R 28201892 intron CG34354 + chr3R 28201963 intron CG34354 + chr3R_5_28200001 chr3R_28200001 RAL-409_125b 2786 chr3R 28253295 28253367 chr3R 28255855 28255875 jockey 14 2546 2.5 4.0 3.2 3.3 2580 chr3R 28253295 intergenic not near genes chr3R 28254585 intergenic not near genes chr3R 28255875 intergenic not near genes chr3R_14_28250001 chr3R_28250001 RAL-409_125b 2787 chr3R 28262625 28262682 chr3R 28262751 28262802 7 119 5.5 10.0 7.8 0.8 177 chr3R 28262625 intergenic CG43125 - chr3R 28262714 intergenic CG43125 - chr3R 28262802 exon CG43125 - chr3R_7_28260001 chr3R_28260001 RAL-409_125b 2788 chr3R 28280677 28280742 chr3R 28280906 28280965 10 227 4.0 4.5 4.2 1.9 288 chr3R 28280677 intergenic not near genes chr3R 28280821 intergenic not near genes chr3R 28280965 intergenic not near genes chr3R_10_28280001 chr3R_28280001 RAL-409_125b 2789 chr3R 28300143 28300191 chr3R 28300279 28300322 11 131 6.0 10.0 8.0 1.2 179 chr3R 28300143 intergenic not near genes chr3R 28300232 intergenic not near genes chr3R 28300322 intergenic not near genes chr3R_11_28300001 chr3R_28300001 RAL-409_125b 2790 chr3R 28302062 28302108 chr3R 28302539 28302599 jockey 4 488 1.5 5.5 3.5 0.9 537 chr3R 28302062 intergenic not near genes chr3R 28302330 intergenic not near genes chr3R 28302599 intergenic not near genes chr3R_4_28300001 chr3R_28300001 RAL-409_125b 2791 chr3R 28305267 28305326 chr3R 28306489 28306548 14 1220 9.0 12.5 10.8 1.2 1281 chr3R 28305267 intergenic not near genes chr3R 28305908 intergenic not near genes chr3R 28306548 intergenic not near genes chr3R_14_28305001 chr3R_28305001 RAL-409_125b 2792 chr3R 28327330 28327391 chr3R 28327754 28327815 17 423 3.5 4.5 4.0 3.4 485 chr3R 28327330 intron larp - chr3R 28327572 intron larp - chr3R 28327815 intron larp - chr3R_17_28325001 chr3R_28325001 RAL-409_125b 2793 chr3R 28407674 28407730 chr3R 28407799 28407849 7 120 3.5 7.5 5.5 1.1 175 chr3R 28407674 intergenic not near genes chr3R 28407762 intergenic not near genes chr3R 28407849 intergenic not near genes chr3R_7_28405001 chr3R_28405001 RAL-409_125b 2794 chr3R 28460049 28460110 chr3R 28460413 28460474 11 359 6.5 3.0 4.8 1.9 425 chr3R 28460049 intron beat-VI + chr3R 28460262 intron beat-VI + chr3R 28460474 intron beat-VI + chr3R_11_28460001 chr3R_28460001 RAL-409_125b 2795 chr3R 28484358 28484401 chr3R 28486240 28486268 11 1872 28.0 36.0 32.0 0.3 1910 chr3R 28484358 intergenic CG1894 + chr3R 28485313 exon CG1894 + chr3R 28486268 intergenic CG1894 + chr3R_11_28485001 chr3R_28485001 RAL-409_125b 2796 chr3R 28594074 28594128 chr3R 28594178 28594257 11 121 3.0 6.0 4.5 2.0 183 chr3R 28594074 5` UTR CR43440 + chr3R 28594166 5` UTR CR43440 + chr3R 28594257 5` UTR CR43440 + chr3R_11_28590001 chr3R_28590001 RAL-409_125b 2797 chr3R 28626218 28626247 chr3R 28626335 28626390 10 126 4.0 7.5 5.8 1.5 172 chr3R 28626218 intron CG10011 - chr3R 28626304 intron CG10011 - chr3R 28626390 intron CG10011 - chr3R_10_28625001 chr3R_28625001 RAL-409_125b 2798 chr3R 28628087 28628153 chr3R 28628212 28628236 12 105 5.0 3.0 4.0 2.4 149 chr3R 28628087 intron CG10011 - chr3R 28628162 intron CG10011 - chr3R 28628236 intron CG10011 - chr3R_12_28625001 chr3R_28625001 RAL-409_125b 2799 chr3R 28640287 28640363 chr3R 28640420 28640496 16 123 6.5 5.0 5.8 2.4 209 chr3R 28640287 intergenic not near genes chr3R 28640392 intergenic not near genes chr3R 28640496 intergenic not near genes chr3R_16_28640001 chr3R_28640001 RAL-409_125b 2800 chr3R 28792822 28792904 chr3R 28797967 28798022 jockey 18 5125 5.5 7.0 6.2 2.5 5200 chr3R 28792822 intergenic not near genes chr3R 28795422 intergenic not near genes chr3R 28798022 intergenic not near genes chr3R_18_28795001 chr3R_28795001 RAL-409_125b 2801 chr3R 28811526 28811597 chr3R 28811722 28811793 22 196 8.0 3.0 5.5 3.4 267 chr3R 28811526 intergenic wdn - chr3R 28811660 intergenic wdn -,CG1646 + chr3R 28811793 intergenic CG1646 +,wdn - chr3R_22_28810001 chr3R_28810001 RAL-409_125b 2802 chr3R 21907534 21907536 chr3R 28831801 28831801 75 6924266 19.5 20.0 19.8 3.6 6924267 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831801 intron WASp - chr3R_75_25365001 chr3R_25365001 RAL-409_125b 2803 chr3R 21907534 21907536 chr3R 28831802 28831802 40 6924267 19.5 19.5 19.5 2.0 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_40_25365001 chr3R_25365001 RAL-409_125b 2804 chr3R 28888732 28888775 chr3R 28888875 28888896 9 139 8.0 8.0 8.0 1.0 164 chr3R 28888732 intron Doa + chr3R 28888814 intron Doa + chr3R 28888896 intron Doa + chr3R_9_28885001 chr3R_28885001 RAL-409_125b 2805 chr3R 28935570 28935617 chr3R 28935696 28935739 12 125 7.5 4.0 5.8 1.8 169 chr3R 28935570 intron CG14521 - chr3R 28935654 intron CG14521 - chr3R 28935739 intron CG14521 - chr3R_12_28935001 chr3R_28935001 RAL-409_125b 2806 chr3R 28971134 28971187 chr3R 28971251 28971317 4 127 6.0 5.0 5.5 0.6 183 chr3R 28971134 5` UTR CR45669 + chr3R 28971226 5` UTR CR45669 + chr3R 28971317 5` UTR CR45669 + chr3R_4_28970001 chr3R_28970001 RAL-409_125b 2807 chr3R 29006850 29006870 chr3R 29006970 29006977 4 116 7.0 6.0 6.5 0.5 127 chr3R 29006850 intron wat - chr3R 29006914 intron wat - chr3R 29006977 intron wat - chr3R_4_29005001 chr3R_29005001 RAL-409_125b 2808 chr3R 29009913 29009987 chr3R 29010063 29010103 12 149 4.5 5.5 5.0 2.0 190 chr3R 29009913 intron wat - chr3R 29010008 intron wat - chr3R 29010103 intron wat - chr3R_12_29010001 chr3R_29010001 RAL-409_125b 2809 chr3R 29067572 29067645 chr3R 29067763 29067846 9 195 4.5 2.0 3.2 2.1 274 chr3R 29067572 intron CG11873 + chr3R 29067709 intron CG11873 + chr3R 29067846 intron CG11873 + chr3R_9_29065001 chr3R_29065001 RAL-409_125b 2810 chr3R 29070007 29070080 chr3R 29070138 29070211 18 129 5.0 6.5 5.8 2.6 204 chr3R 29070007 intron CG11873 + chr3R 29070109 intron CG11873 + chr3R 29070211 intron CG11873 + chr3R_18_29070001 chr3R_29070001 RAL-409_125b 2811 chr3R 29079354 29079396 chr3R 29080764 29080818 NOF 9 1419 8.0 7.5 7.8 1.0 1464 chr3R 29079354 intron CG11873 + chr3R 29080086 intron CG11873 + chr3R 29080818 intron CG11873 + chr3R_9_29080001 chr3R_29080001 RAL-409_125b 2812 chr3R 29091400 29091432 chr3R 29091528 29091563 6 128 6.5 8.0 7.2 0.7 163 chr3R 29091400 intron CG11873 + chr3R 29091482 intron CG11873 + chr3R 29091563 intron CG11873 + chr3R_6_29090001 chr3R_29090001 RAL-409_125b 2813 chr3R 29203803 29203819 chr3R 29203928 29203949 7 125 8.0 3.5 5.8 1.0 146 chr3R 29203803 5` UTR CG14508 - chr3R 29203876 intron CG14508 - chr3R 29203949 intron CG14508 - chr3R_7_29200001 chr3R_29200001 RAL-409_125b 2814 chr3R 29213020 29213087 chr3R 29213153 29213220 21 128 5.0 7.5 6.2 2.9 200 chr3R 29213020 intergenic not near genes chr3R 29213120 intergenic not near genes chr3R 29213220 intergenic not near genes chr3R_21_29210001 chr3R_29210001 RAL-409_125b 2815 chr3R 29237251 29237531 chr3R 29239272 29239474 5 2027 17.5 5.5 11.5 0.4 2223 chr3R 29237251 exon CG11951 - chr3R 29238362 intron CG11951 - chr3R 29239474 exon CG31427 - chr3R_5_29235001 chr3R_29235001 RAL-409_125b 2816 chr3R 29264184 29264202 chr3R 29264334 29264354 5 151 2.5 6.5 4.5 0.9 170 chr3R 29264184 intergenic not near genes chr3R 29264269 intergenic not near genes chr3R 29264354 intergenic not near genes chr3R_5_29260001 chr3R_29260001 RAL-409_125b 2817 chr3R 29319778 29319844 chr3R 29320147 29320213 jockey 12 368 4.5 7.5 6.0 1.7 435 chr3R 29319778 intergenic Cnx99A - chr3R 29319996 intergenic Cnx99A - chr3R 29320213 intergenic not near genes chr3R_12_29315001 chr3R_29315001 RAL-409_125b 2818 chr3R 29330887 29330899 chr3R 29331013 29331025 6 125 3.5 0.0 1.8 2.1 138 chr3R 29330887 intergenic not near genes chr3R 29330956 intergenic not near genes chr3R 29331025 intergenic not near genes chr3R_6_29330001 chr3R_29330001 RAL-409_125b 2819 chr3R 29332239 29332376 chr3R 29332361 29332478 7 124 2.0 2.0 2.0 2.3 239 chr3R 29332239 intergenic not near genes chr3R 29332358 intergenic not near genes chr3R 29332478 intergenic not near genes chr3R_7_29330001 chr3R_29330001 RAL-409_125b 2820 chr3R 29336337 29336352 chr3R 29336453 29336455 5 115 9.5 11.5 10.5 0.4 118 chr3R 29336337 intergenic not near genes chr3R 29336396 intergenic not near genes chr3R 29336455 intergenic not near genes chr3R_5_29335001 chr3R_29335001 RAL-409_125b 2821 chr3R 29356018 29356079 chr3R 29356150 29356210 9 130 1.0 10.5 5.8 1.3 192 chr3R 29356018 intergenic CR45547 - chr3R 29356114 intergenic CR45547 - chr3R 29356210 3` UTR CR45547 - chr3R_9_29355001 chr3R_29355001 RAL-409_125b 2822 chr3R 29406612 29406628 chr3R 29407927 29407964 jockey 6 1322 6.0 13.0 9.5 0.6 1352 chr3R 29406612 intron Ptp99A + chr3R 29407288 intron Ptp99A + chr3R 29407964 intron Ptp99A + chr3R_6_29405001 chr3R_29405001 RAL-409_125b 2823 chr3R 29449330 29449384 chr3R 29449442 29449512 15 122 8.0 7.5 7.8 1.7 182 chr3R 29449330 intron Ptp99A + chr3R 29449421 intron Ptp99A + chr3R 29449512 intron Ptp99A + chr3R_15_29445001 chr3R_29445001 RAL-409_125b 2824 chr3R 29471983 29472032 chr3R 29472104 29472175 9 133 6.0 5.5 5.8 1.3 192 chr3R 29471983 intron Ptp99A + chr3R 29472079 intron Ptp99A + chr3R 29472175 intron Ptp99A + chr3R_9_29470001 chr3R_29470001 RAL-409_125b 2825 chr3R 29474381 29474440 chr3R 29474518 29474577 14 136 6.5 7.0 6.8 1.8 196 chr3R 29474381 intron Ptp99A + chr3R 29474479 intron Ptp99A + chr3R 29474577 intron Ptp99A + chr3R_14_29470001 chr3R_29470001 RAL-409_125b 2826 chr3R 29505851 29505880 chr3R 29505978 29506002 8 126 3.0 5.5 4.2 1.5 151 chr3R 29505851 intergenic not near genes chr3R 29505926 intergenic not near genes chr3R 29506002 intergenic not near genes chr3R_8_29505001 chr3R_29505001 RAL-409_125b 2827 chr3R 29539388 29539424 chr3R 29539514 29539537 6 122 6.5 0.0 3.2 1.4 149 chr3R 29539388 intergenic not near genes chr3R 29539462 intergenic not near genes chr3R 29539537 intergenic not near genes chr3R_6_29535001 chr3R_29535001 RAL-409_125b 2828 chr3R 29565724 29565763 chr3R 29565852 29565880 9 122 6.0 6.0 6.0 1.3 156 chr3R 29565724 intergenic Dr + chr3R 29565802 intergenic not near genes chr3R 29565880 intergenic not near genes chr3R_9_29565001 chr3R_29565001 RAL-409_125b 2829 chr3R 29566334 29566409 chr3R 29566461 29566536 12 125 10.5 8.0 9.2 1.2 202 chr3R 29566334 intergenic not near genes chr3R 29566435 intergenic not near genes chr3R 29566536 intergenic not near genes chr3R_12_29565001 chr3R_29565001 RAL-409_125b 2830 chr3R 29576760 29577001 chr3R 29576904 29577126 5 132 11.0 9.5 10.2 0.4 366 chr3R 29576760 intergenic not near genes chr3R 29576943 intergenic not near genes chr3R 29577126 intergenic not near genes chr3R_5_29575001 chr3R_29575001 RAL-409_125b 2831 chr3R 29590347 29590400 chr3R 29590476 29590517 11 134 6.0 4.0 5.0 1.8 170 chr3R 29590347 exon CG31041 - chr3R 29590432 intron CG31041 - chr3R 29590517 exon CG31041 - chr3R_11_29590001 chr3R_29590001 RAL-409_125b 2832 chr3R 29592690 29592766 chr3R 29592818 29592894 11 127 7.0 8.5 7.8 1.2 204 chr3R 29592690 intron alph + chr3R 29592792 intron alph + chr3R 29592894 intron alph + chr3R_11_29590001 chr3R_29590001 RAL-409_125b 2833 chr3R 29627539 29627586 chr3R 29627655 29627724 8 128 3.0 2.0 2.5 2.3 185 chr3R 29627539 intergenic not near genes chr3R 29627632 intergenic not near genes chr3R 29627724 intergenic not near genes chr3R_8_29625001 chr3R_29625001 RAL-409_125b 2834 chr3R 29718108 29718160 chr3R 29718230 29718286 7 117 7.0 4.0 5.5 1.1 178 chr3R 29718108 intergenic not near genes chr3R 29718197 intergenic CG15506 + chr3R 29718286 intergenic CG15506 + chr3R_7_29715001 chr3R_29715001 RAL-409_125b 2835 chr3R 29738240 29738266 chr3R 29739756 29739782 hobo 14 1516 9.0 10.5 9.8 1.3 1542 chr3R 29738240 intergenic CG1969 +,CG7598 + chr3R 29739011 intron CG1969 + chr3R 29739782 5` UTR CG1969 + chr3R_14_29735001 chr3R_29735001 RAL-409_125b 2836 chr3R 29738277 29738293 chr3R 29739749 29739810 hobo 4 1503 6.0 9.5 7.8 0.5 1533 chr3R 29738277 5` UTR CG1969 + chr3R 29739044 intron CG1969 + chr3R 29739810 5` UTR CG1969 + chr3R_4_29735001 chr3R_29735001 RAL-409_125b 2837 chr3R 29760322 29760386 chr3R 29761573 29761575 pogo 14 1245 6.5 7.0 6.8 1.8 1253 chr3R 29760322 intergenic not near genes chr3R 29760948 intergenic not near genes chr3R 29761575 intergenic not near genes chr3R_14_29760001 chr3R_29760001 RAL-409_125b 2838 chr3R 29880542 29880612 chr3R 29880677 29880723 9 121 3.5 8.5 6.0 1.3 181 chr3R 29880542 intron CG31038 + chr3R 29880632 intron CG31038 + chr3R 29880723 intron CG31038 + chr3R_9_29880001 chr3R_29880001 RAL-409_125b 2839 chr3R 29881989 29882023 chr3R 29891187 29891230 roo 11 9205 8.0 9.0 8.5 1.2 9241 chr3R 29881989 intron CG31038 + chr3R 29886610 intron CG31038 + chr3R 29891230 intron CG31038 + chr3R_11_29885001 chr3R_29885001 RAL-409_125b 2840 chr3R 29882030 29882044 chr3R 29891176 29891246 roo 4 9172 7.5 5.5 6.5 0.5 9216 chr3R 29882030 intron CG31038 + chr3R 29886638 intron CG31038 + chr3R 29891246 intron CG31038 + chr3R_4_29885001 chr3R_29885001 RAL-409_125b 2841 chr3R 29950540 29950598 chr3R 29950652 29950664 8 98 4.0 4.5 4.2 1.5 124 chr3R 29950540 intergenic TkR99D - chr3R 29950602 intergenic TkR99D - chr3R 29950664 intergenic TkR99D - chr3R_8_29950001 chr3R_29950001 RAL-409_125b 2842 chr3R 29963453 29963501 chr3R 29963586 29963641 10 143 2.0 1.0 1.5 4.0 188 chr3R 29963453 intron TkR99D - chr3R 29963547 intron TkR99D - chr3R 29963641 intron TkR99D - chr3R_10_29960001 chr3R_29960001 RAL-409_125b 2843 chr3R 29966014 29966071 chr3R 29966144 29966202 11 124 4.5 6.5 5.5 1.7 188 chr3R 29966014 intron TkR99D - chr3R 29966108 intron TkR99D - chr3R 29966202 intron TkR99D - chr3R_11_29965001 chr3R_29965001 RAL-409_125b 2844 chr3R 30013636 30013687 chr3R 30013769 30013820 11 131 7.5 9.5 8.5 1.2 184 chr3R 30013636 intron CG7920 - chr3R 30013728 intron CG7920 - chr3R 30013820 intron CG7920 - chr3R_11_30010001 chr3R_30010001 RAL-409_125b 2845 chr3R 30026984 30026989 chr3R 30027102 30027117 4 126 0.0 10.0 5.0 0.7 133 chr3R 30026984 intron Axn + chr3R 30027050 intron Axn + chr3R 30027117 intron Axn + chr3R_4_30025001 chr3R_30025001 RAL-409_125b 2846 chr3R 30084812 30084878 chr3R 30086318 30086384 hobo 10 1514 2.0 3.5 2.8 2.6 1572 chr3R 30084812 intron sima + chr3R 30085598 intron sima + chr3R 30086384 intron sima + chr3R_10_30085001 chr3R_30085001 RAL-409_125b 2847 chr3R 30136931 30136975 chr3R 30137048 30137099 10 117 3.0 6.0 4.5 1.8 168 chr3R 30136931 exon AdoR - chr3R 30137015 intron AdoR - chr3R 30137099 exon AdoR - chr3R_10_30135001 chr3R_30135001 RAL-409_125b 2848 chr3R 30181313 30181367 chr3R 30181449 30181512 11 139 3.0 1.0 2.0 3.7 199 chr3R 30181313 3` UTR Bet5 + chr3R 30181412 3` UTR Bet5 + chr3R 30181512 intergenic Bet5 + chr3R_11_30180001 chr3R_30180001 RAL-409_125b 2849 chr3R 30227602 30227624 chr3R 30227785 30227802 4 182 1.0 6.5 3.8 0.8 200 chr3R 30227602 intergenic not near genes chr3R 30227702 intergenic not near genes chr3R 30227802 intergenic not near genes chr3R_4_30225001 chr3R_30225001 RAL-409_125b 2850 chr3R 30238725 30238789 chr3R 30239933 30240004 1360 12 1211 4.5 6.0 5.2 1.9 1279 chr3R 30238725 intergenic not near genes chr3R 30239364 intergenic not near genes chr3R 30240004 intergenic not near genes chr3R_12_30235001 chr3R_30235001 RAL-409_125b 2851 chr3R 30268416 30268441 chr3R 30268517 30268566 7 122 7.0 6.0 6.5 0.9 150 chr3R 30268416 intergenic not near genes chr3R 30268491 intergenic not near genes chr3R 30268566 intergenic not near genes chr3R_7_30265001 chr3R_30265001 RAL-409_125b 2852 chr3R 30287071 30287129 chr3R 30287220 30287298 21 162 6.0 5.0 5.5 3.2 227 chr3R 30287071 intron hdc + chr3R 30287184 intron hdc + chr3R 30287298 intron hdc + chr3R_21_30285001 chr3R_30285001 RAL-409_125b 2853 chr3R 30310852 30310923 chr3R 30310985 30311045 15 129 4.5 5.0 4.8 2.6 193 chr3R 30310852 intron hdc + chr3R 30310948 intron hdc + chr3R 30311045 intron hdc + chr3R_15_30310001 chr3R_30310001 RAL-409_125b 2854 chr3R 30330993 30331039 chr3R 30331137 30331183 7 141 7.5 11.0 9.2 0.7 190 chr3R 30330993 intron hdc + chr3R 30331088 intron hdc + chr3R 30331183 intron hdc + chr3R_7_30330001 chr3R_30330001 RAL-409_125b 2855 chr3R 30344923 30345001 chr3R 30345051 30345119 15 120 6.5 10.5 8.5 1.6 196 chr3R 30344923 intron hdc + chr3R 30345021 intron hdc + chr3R 30345119 intron hdc + chr3R_15_30345001 chr3R_30345001 RAL-409_125b 2856 chr3R 30396172 30396220 chr3R 30404483 30404536 roo 8 8314 4.0 3.0 3.5 1.8 8364 chr3R 30396172 intergenic not near genes chr3R 30400354 intergenic not near genes chr3R 30404536 5` UTR CR45570 + chr3R_8_30400001 chr3R_30400001 RAL-409_125b 2857 chr3R 30440655 30440713 chr3R 30440964 30441022 15 307 4.0 10.0 7.0 1.9 367 chr3R 30440655 intron CG15537 - chr3R 30440838 intron CG15537 - chr3R 30441022 intron CG15537 - chr3R_15_30440001 chr3R_30440001 RAL-409_125b 2858 chr3R 30456354 30456421 chr3R 30456484 30456524 15 128 3.5 8.0 5.8 2.2 170 chr3R 30456354 intergenic CG2224 -,aralar1 - chr3R 30456439 intergenic CG2224 - chr3R 30456524 3` UTR CG2224 - chr3R_15_30455001 chr3R_30455001 RAL-409_125b 2859 chr3R 30457976 30458039 chr3R 30458106 30458169 16 128 2.0 8.5 5.2 2.6 193 chr3R 30457976 intron CG2224 - chr3R 30458072 intron CG2224 - chr3R 30458169 intron CG2224 - chr3R_16_30455001 chr3R_30455001 RAL-409_125b 2860 chr3R 30480448 30480459 chr3R 30482952 30482972 jockey 4 2509 12.0 1.0 6.5 0.5 2524 chr3R 30480448 intron PH4alphaEFB + chr3R 30481710 intron PH4alphaEFB + chr3R 30482972 intron PH4alphaEFB + chr3R_4_30480001 chr3R_30480001 RAL-409_125b 2861 chr3R 30480463 30480505 chr3R 30482951 30483023 jockey 12 2504 4.0 1.0 2.5 3.4 2560 chr3R 30480463 intron PH4alphaEFB + chr3R 30481743 intron PH4alphaEFB + chr3R 30483023 intron PH4alphaEFB + chr3R_12_30480001 chr3R_30480001 RAL-409_125b 2862 chr3R 30495135 30495192 chr3R 30495305 30495352 8 164 5.0 8.5 6.8 1.0 217 chr3R 30495135 intron PH4alphaMP - chr3R 30495244 intron PH4alphaMP - chr3R 30495352 intron PH4alphaMP - chr3R_8_30495001 chr3R_30495001 RAL-409_125b 2863 chr3R 30498352 30498425 chr3R 30498613 30498673 4 251 1.0 7.0 4.0 0.8 321 chr3R 30498352 intron PH4alphaNE1 - chr3R 30498512 intron PH4alphaNE1 - chr3R 30498673 intron PH4alphaNE1 - chr3R_4_30495001 chr3R_30495001 RAL-409_125b 2864 chr3R 30544610 30544667 chr3R 30544734 30544771 6 111 6.0 5.5 5.8 0.9 161 chr3R 30544610 intron tmod + chr3R 30544690 intron tmod + chr3R 30544771 intron tmod + chr3R_6_30540001 chr3R_30540001 RAL-409_125b 2865 chr3R 30551254 30551286 chr3R 30551354 30551420 10 116 4.5 4.5 4.5 1.8 166 chr3R 30551254 intron tmod + chr3R 30551337 intron tmod + chr3R 30551420 intron tmod + chr3R_10_30550001 chr3R_30550001 RAL-409_125b 2866 chr3R 30558117 30558144 chr3R 30558231 30558275 6 128 6.0 6.5 6.2 0.8 158 chr3R 30558117 intron,intron tmod +,CG34155 - chr3R 30558196 intron,intron tmod +,CG34155 - chr3R 30558275 intron,intron tmod +,CG34155 - chr3R_6_30555001 chr3R_30555001 RAL-409_125b 2867 chr3R 30592472 30592534 chr3R 30592622 30592671 16 149 7.5 6.5 7.0 2.0 199 chr3R 30592472 intergenic CG2246 - chr3R 30592572 intergenic CG2246 - chr3R 30592671 intergenic CG2246 - chr3R_16_30590001 chr3R_30590001 RAL-409_125b 2868 chr3R 30627584 30627633 chr3R 30627693 30627752 12 113 4.0 3.0 3.5 2.7 168 chr3R 30627584 3` UTR CG2267 - chr3R 30627668 exon CG2267 - chr3R 30627752 exon CG2267 - chr3R_12_30625001 chr3R_30625001 RAL-409_125b 2869 chr3R 30679475 30679536 chr3R 30686994 30687049 blood 19 7515 7.5 6.0 6.8 2.4 7574 chr3R 30679475 intergenic not near genes chr3R 30683262 intergenic not near genes chr3R 30687049 intergenic not near genes chr3R_19_30680001 chr3R_30680001 RAL-409_125b 2870 chr3R 30690117 30690125 chr3R 30690245 30690246 4 128 17.5 5.0 11.2 0.3 129 chr3R 30690117 intergenic not near genes chr3R 30690182 intergenic Spn100A + chr3R 30690246 intergenic Spn100A + chr3R_4_30690001 chr3R_30690001 RAL-409_125b 2871 chr3R 30690132 30690187 chr3R 30690244 30690321 16 120 6.0 5.0 5.5 2.5 189 chr3R 30690132 intergenic not near genes chr3R 30690226 intergenic Spn100A + chr3R 30690321 intergenic Spn100A + chr3R_16_30690001 chr3R_30690001 RAL-409_125b 2872 chr3R 30700836 30700858 chr3R 30701004 30701020 8 169 2.5 1.0 1.8 2.9 184 chr3R 30700836 intergenic not near genes chr3R 30700928 intergenic not near genes chr3R 30701020 intergenic not near genes chr3R_8_30700001 chr3R_30700001 RAL-409_125b 2873 chr3R 30859356 30859426 chr3R 30859484 30859554 18 127 6.0 3.5 4.8 3.1 198 chr3R 30859356 intergenic not near genes chr3R 30859455 intergenic not near genes chr3R 30859554 intergenic not near genes chr3R_18_30855001 chr3R_30855001 RAL-409_125b 2874 chr3R 30900497 30900563 chr3R 30901675 30901748 18 1181 4.5 7.0 5.8 2.6 1251 chr3R 30900497 exon Cyp4c3 + chr3R 30901122 intron CG33483 - chr3R 30901748 intron CG33483 - chr3R_18_30900001 chr3R_30900001 RAL-409_125b 2875 chr3R 30907752 30907823 chr3R 30907981 30908059 14 233 5.0 3.5 4.2 2.7 307 chr3R 30907752 intergenic not near genes chr3R 30907906 intergenic not near genes chr3R 30908059 intergenic not near genes chr3R_14_30905001 chr3R_30905001 RAL-409_125b 2876 chr3R 30985648 30985712 chr3R 30985783 30985847 12 134 1.5 4.0 2.8 3.2 199 chr3R 30985648 intron 5-HT7 - chr3R 30985748 intron 5-HT7 - chr3R 30985847 intron 5-HT7 - chr3R_12_30985001 chr3R_30985001 RAL-409_125b 2877 chr3R 30993619 30993663 chr3R 30993749 30993793 8 126 2.5 3.0 2.8 2.1 174 chr3R 30993619 intron 5-HT7 - chr3R 30993706 intron 5-HT7 - chr3R 30993793 intron 5-HT7 - chr3R_8_30990001 chr3R_30990001 RAL-409_125b 2878 chr3R 31042069 31042139 chr3R 31042206 31042274 21 135 7.0 4.0 5.5 3.2 205 chr3R 31042069 exon CanA1 + chr3R 31042172 intron CanA1 + chr3R 31042274 intron CanA1 + chr3R_21_31040001 chr3R_31040001 RAL-409_125b 2879 chr3R 31055483 31055519 chr3R 31055630 31055664 4 146 2.0 2.5 2.2 1.2 181 chr3R 31055483 3` UTR dco - chr3R 31055574 3` UTR dco - chr3R 31055664 3` UTR dco - chr3R_4_31055001 chr3R_31055001 RAL-409_125b 2880 chr3R 31067016 31067051 chr3R 31067151 31067196 20 160 10.0 6.0 8.0 2.2 180 chr3R 31067016 intron Sox100B + chr3R 31067106 intron Sox100B + chr3R 31067196 intron Sox100B + chr3R_20_31065001 chr3R_31065001 RAL-409_125b 2881 chr3R 31146713 31146769 chr3R 31146831 31146887 14 122 7.0 9.0 8.0 1.6 174 chr3R 31146713 intron Gycbeta100B + chr3R 31146800 intron Gycbeta100B + chr3R 31146887 intron Gycbeta100B + chr3R_14_31145001 chr3R_31145001 RAL-409_125b 2882 chr3R 31274321 31274381 chr3R 31274448 31274460 15 119 4.5 5.0 4.8 2.6 139 chr3R 31274321 intergenic not near genes chr3R 31274390 intergenic not near genes chr3R 31274460 intergenic not near genes chr3R_15_31270001 chr3R_31270001 RAL-409_125b 2883 chr3R 31279333 31279401 chr3R 31285574 31285632 diver 13 6235 3.5 3.5 3.5 2.9 6299 chr3R 31279333 intergenic not near genes chr3R 31282482 intergenic not near genes chr3R 31285632 intergenic not near genes chr3R_13_31280001 chr3R_31280001 RAL-409_125b 2884 chr3R 31348034 31348090 chr3R 31348134 31348206 17 120 4.5 3.0 3.8 3.5 172 chr3R 31348034 intron CG34347 + chr3R 31348120 intron CG34347 + chr3R 31348206 intron CG34347 + chr3R_17_31345001 chr3R_31345001 RAL-409_125b 2885 chr3R 31412669 31412733 chr3R 31412802 31412876 13 141 3.0 2.0 2.5 3.7 207 chr3R 31412669 intron Gprk2 + chr3R 31412772 intron Gprk2 + chr3R 31412876 intron Gprk2 + chr3R_13_31410001 chr3R_31410001 RAL-409_125b 2886 chr3R 31413089 31413109 chr3R 31418293 31418359 copia 4 5224 8.0 0.5 4.2 0.8 5270 chr3R 31413089 intron Gprk2 + chr3R 31415724 intron Gprk2 + chr3R 31418359 intron Gprk2 + chr3R_4_31415001 chr3R_31415001 RAL-409_125b 2887 chr3R 31426843 31426899 chr3R 31426985 31427040 18 140 6.0 6.0 6.0 2.6 197 chr3R 31426843 intron Gprk2 + chr3R 31426942 intron Gprk2 + chr3R 31427040 intron Gprk2 + chr3R_18_31425001 chr3R_31425001 RAL-409_125b 2888 chr3R 31435314 31435382 chr3R 31435516 31435584 28 200 5.5 3.5 4.5 5.1 270 chr3R 31435314 intron Gprk2 + chr3R 31435449 intron Gprk2 + chr3R 31435584 intron Gprk2 + chr3R_28_31435001 chr3R_31435001 RAL-409_125b 2889 chr3R 31606119 31606163 chr3R 31606316 31606349 10 200 8.5 0.5 4.5 1.8 230 chr3R 31606119 intron CycG - chr3R 31606234 intron CycG - chr3R 31606349 intron CycG - chr3R_10_31605001 chr3R_31605001 RAL-409_125b 2890 chr3R 31630012 31630086 chr3R 31630167 31630228 14 146 3.0 3.0 3.0 3.5 216 chr3R 31630012 intron kek6 + chr3R 31630120 intron kek6 + chr3R 31630228 intron kek6 + chr3R_14_31630001 chr3R_31630001 RAL-409_125b 2891 chr3R 31691509 31691559 chr3R 31696305 31696369 Doc 13 4808 5.0 9.0 7.0 1.6 4860 chr3R 31691509 intergenic not near genes chr3R 31693939 intergenic not near genes chr3R 31696369 intergenic not near genes chr3R_13_31690001 chr3R_31690001 RAL-409_125b 2892 chr3R 31726604 31726684 chr3R 31726744 31726820 13 127 5.5 7.0 6.2 1.8 216 chr3R 31726604 intron ttk + chr3R 31726712 intron ttk + chr3R 31726820 intron ttk + chr3R_13_31725001 chr3R_31725001 RAL-409_125b 2893 chr3R 31774829 31774894 chr3R 31775024 31775084 18 192 5.5 9.0 7.2 2.2 255 chr3R 31774829 3` UTR sip3 + chr3R 31774956 3` UTR sip3 + chr3R 31775084 3` UTR,3` UTR sip3 +,CG2126 - chr3R_18_31770001 chr3R_31770001 RAL-409_125b 2894 chr3R 31851203 31851250 chr3R 31851321 31851383 11 130 10.5 9.0 9.8 1.0 180 chr3R 31851203 intergenic heph - chr3R 31851293 intergenic heph - chr3R 31851383 intergenic heph - chr3R_11_31850001 chr3R_31850001 RAL-409_125b 2895 chr3R 31880272 31880327 chr3R 31880373 31880409 9 95 8.0 5.0 6.5 1.2 137 chr3R 31880272 intron heph - chr3R 31880340 intron heph - chr3R 31880409 intron heph - chr3R_9_31880001 chr3R_31880001 RAL-409_125b 2896 chr3R 31911643 31911793 chr3R 31911769 31911898 21 135 3.5 1.5 2.5 6.0 255 chr3R 31911643 intron heph - chr3R 31911770 intron heph - chr3R 31911898 intron heph - chr3R_21_31910001 chr3R_31910001 RAL-409_125b 2897 chr3R 31931148 31931203 chr3R 31931276 31931336 6 132 5.0 4.5 4.8 1.0 188 chr3R 31931148 intron heph - chr3R 31931242 intron heph - chr3R 31931336 intron heph - chr3R_6_31930001 chr3R_31930001 RAL-409_125b 2898 chr3R 31953114 31953169 chr3R 31953241 31953292 17 124 5.0 5.0 5.0 2.8 178 chr3R 31953114 intron heph - chr3R 31953203 intron heph - chr3R 31953292 intron heph - chr3R_17_31950001 chr3R_31950001 RAL-409_125b 2899 chr3R 31991070 31991131 chr3R 31991199 31991260 8 128 9.0 8.5 8.8 0.8 190 chr3R 31991070 intron heph - chr3R 31991165 intron heph - chr3R 31991260 intron heph - chr3R_8_31990001 chr3R_31990001 RAL-409_125b 2900 chr3R 31997953 31998016 chr3R 32005468 32005516 blood 23 7515 2.0 4.0 3.0 5.8 7563 chr3R 31997953 intron heph - chr3R 32001734 intron heph - chr3R 32005516 intron heph - chr3R_23_32000001 chr3R_32000001 RAL-409_125b 2901 chr3R 32013229 32013299 chr3R 32013397 32013462 9 164 6.5 1.0 3.8 1.9 233 chr3R 32013229 intron,5` UTR heph -,CR45556 + chr3R 32013346 intron,5` UTR heph -,CR45556 + chr3R 32013462 intron heph - chr3R_9_32010001 chr3R_32010001 RAL-409_125b 2902 chr3R 32039922 32039979 chr3R 32040073 32040130 19 150 11.0 8.0 9.5 1.8 208 chr3R 32039922 intergenic CG2053 + chr3R 32040026 intergenic CG2053 + chr3R 32040130 intergenic CG2053 + chr3R_19_32040001 chr3R_32040001 RAL-409_125b 2903 chr4 76461 76495 chr4 81954 81988 I-element 10 5490 10.5 5.5 8.0 1.1 5527 chr4 76461 intron pan + chr4 79224 intron pan + chr4 81988 intron pan + chr4_10_75001 chr4_75001 RAL-409_125b 2904 chr4 319948 320012 chr4 328174 328238 Stalker2 10 8224 3.0 4.0 3.5 2.2 8290 chr4 319948 3` UTR CG32850 + chr4 324093 intron CG32850 + chr4 328238 3` UTR,3` UTR CG32850 +,PMCA - chr4_10_320001 chr4_320001 RAL-409_125b 2905 chr4 671582 671628 chr4 680206 680257 Tirant 15 8628 7.0 9.5 8.2 1.6 8675 chr4 671582 intron CG11360 + chr4 675920 intron CG11360 + chr4 680257 intron CG11360 + chr4_15_675001 chr4_675001 RAL-409_125b 2906 chr4 706627 706651 chr4 706810 706847 8 188 31.0 28.5 29.8 0.3 220 chr4 706627 intron ey + chr4 706737 intron ey + chr4 706847 intron ey + chr4_8_705001 chr4_705001 RAL-409_125b 2907 chr4 959591 959631 chr4 959820 959860 5 228 9.0 4.0 6.5 0.7 269 chr4 959591 intergenic CR44030 +,CR45201 - chr4 959726 5` UTR CR44030 + chr4 959860 5` UTR CR44030 + chr4_5_955001 chr4_955001 RAL-409_125b 2908 chr4 972457 972522 chr4 972589 972644 9 129 6.0 10.0 8.0 1.0 187 chr4 972457 intron fuss - chr4 972550 intron fuss - chr4 972644 intron fuss - chr4_9_970001 chr4_970001 RAL-409_125b 2909 chr4 1231188 1231252 chr4 1231364 1231434 15 173 7.0 5.0 6.0 2.1 246 chr4 1231188 intron Caps + chr4 1231311 intron Caps + chr4 1231434 intron Caps + chr4_15_1230001 chr4_1230001 RAL-409_125b 2910 chr4 1250515 1250578 chr4 1250651 1250714 10 134 2.0 3.5 2.8 2.6 199 chr4 1250515 intron Caps + chr4 1250614 intron Caps + chr4 1250714 intron Caps + chr4_10_1250001 chr4_1250001 RAL-409_125b 2911 chrX 154324 154398 chrX 154456 154529 19 129 2.5 3.0 2.8 5.0 205 chrX 154324 intron tyn + chrX 154426 intron tyn + chrX 154529 intron tyn + chrX_19_150001 chrX_150001 RAL-409_125b 2912 chrX 295815 295869 chrX 303485 303524 412 7 7668 5.0 8.5 6.8 0.9 7709 chrX 295815 intron CG3777 + chrX 299670 intron CG3777 + chrX 303524 intron CG3777 + chrX_7_295001 chrX_295001 RAL-409_125b 2913 chrX 318452 318489 chrX 323588 323618 flea 4 5133 4.5 7.5 6.0 0.6 5166 chrX 318452 intron,intron CG3777 +,CG32816 - chrX 321035 intron,intron CG3777 +,CG32816 - chrX 323618 intron,intron CG3777 +,CG32816 - chrX_4_320001 chrX_320001 RAL-409_125b 2914 chrX 325599 325637 chrX 325723 325772 11 130 5.5 4.0 4.8 1.9 173 chrX 325599 intron,intron CG3777 +,CG32816 - chrX 325686 intron,intron CG3777 +,CG32816 - chrX 325772 intron,intron CG3777 +,CG32816 - chrX_11_325001 chrX_325001 RAL-409_125b 2915 chrX 428379 428443 chrX 434614 434678 3S18 14 6233 4.0 4.5 4.2 2.7 6299 chrX 428379 intron CG32816 - chrX 431528 intron CG32816 - chrX 434678 intron CG32816 - chrX_14_430001 chrX_430001 RAL-409_125b 2916 chrX 551389 551444 chrX 559001 559056 412 8 7608 5.5 2.5 4.0 1.6 7667 chrX 551389 intron Appl + chrX 555222 intron Appl + chrX 559056 intron Appl + chrX_8_555001 chrX_555001 RAL-409_125b 2917 chrX 602827 602834 chrX 602965 602972 4 144 4.5 8.0 6.2 0.6 145 chrX 602827 intron CG13366 - chrX 602900 intron CG13366 - chrX 602972 intron CG13366 - chrX_4_600001 chrX_600001 RAL-409_125b 2918 chrX 677377 677437 chrX 677526 677592 7 152 4.0 5.5 4.8 1.2 215 chrX 677377 intergenic not near genes chrX 677484 intergenic not near genes chrX 677592 intergenic not near genes chrX_7_675001 chrX_675001 RAL-409_125b 2919 chrX 802276 802308 chrX 802362 802418 8 105 7.0 7.0 7.0 1.0 142 chrX 802276 exon CG13359 - chrX 802347 exon CG13359 - chrX 802418 exon CG13359 - chrX_8_800001 chrX_800001 RAL-409_125b 2920 chrX 827575 827609 chrX 835399 835451 roo 11 7836 6.5 4.5 5.5 1.7 7876 chrX 827575 intron CG43867 - chrX 831513 intron CG43867 - chrX 835451 intron CG43867 - chrX_11_830001 chrX_830001 RAL-409_125b 2921 chrX 906661 906729 chrX 908500 908558 S-element 18 1835 3.0 7.5 5.2 2.9 1897 chrX 906661 intron CG43867 - chrX 907610 intron CG43867 - chrX 908558 intron CG43867 - chrX_18_905001 chrX_905001 RAL-409_125b 2922 chrX 1050514 1050581 chrX 1050627 1050682 13 120 5.5 6.5 6.0 1.9 168 chrX 1050514 intron CR44779 + chrX 1050598 intron CR44779 + chrX 1050682 intron CR44779 + chrX_13_1050001 chrX_1050001 RAL-409_125b 2923 chrX 1218481 1218489 chrX 1218625 1218633 5 144 3.0 7.0 5.0 0.8 152 chrX 1218481 3` UTR CG3638 - chrX 1218557 3` UTR CG3638 - chrX 1218633 3` UTR CG3638 - chrX_5_1215001 chrX_1215001 RAL-409_125b 2924 chrX 1357731 1357775 chrX 1367951 1367995 Doc 9 10220 8.5 5.5 7.0 1.1 10264 chrX 1357731 intergenic png - chrX 1362863 intergenic not near genes chrX 1367995 intergenic not near genes chrX_9_1360001 chrX_1360001 RAL-409_125b 2925 chrX 1416354 1416408 chrX 1416475 1416522 5 108 16.0 16.0 16.0 0.3 168 chrX 1416354 intron futsch + chrX 1416438 intron futsch + chrX 1416522 intron futsch + chrX_5_1415001 chrX_1415001 RAL-409_125b 2926 chrX 1515189 1515204 chrX 1515315 1515326 4 125 12.5 4.5 8.5 0.4 137 chrX 1515189 intron inc + chrX 1515258 intron inc + chrX 1515326 intron inc + chrX_4_1515001 chrX_1515001 RAL-409_125b 2927 chrX 1515216 1515250 chrX 1515306 1515367 6 115 4.0 3.5 3.8 1.2 151 chrX 1515216 intron inc + chrX 1515292 intron inc + chrX 1515367 intron inc + chrX_6_1515001 chrX_1515001 RAL-409_125b 2928 chrX 1706825 1706840 chrX 1706935 1706959 9 114 5.0 10.5 7.8 1.0 134 chrX 1706825 intergenic not near genes chrX 1706892 intergenic not near genes chrX 1706959 intergenic not near genes chrX_9_1705001 chrX_1705001 RAL-409_125b 2929 chrX 1903314 1903376 chrX 1903436 1903497 9 124 5.0 5.5 5.2 1.5 183 chrX 1903314 5` UTR CR43864 + chrX 1903406 5` UTR CR43864 + chrX 1903497 5` UTR CR43864 + chrX_9_1900001 chrX_1900001 RAL-409_125b 2930 chrX 1930496 1930557 chrX 1938117 1938178 opus 16 7617 2.5 5.0 3.8 3.3 7682 chrX 1930496 3` UTR CG11596 + chrX 1934337 intergenic not near genes chrX 1938178 3` UTR CG3857 - chrX_16_1930001 chrX_1930001 RAL-409_125b 2931 chrX 1954877 1954919 chrX 1962826 1962848 Stalker2 15 7963 5.0 3.0 4.0 3.0 7971 chrX 1954877 intron Hr4 + chrX 1958862 intron Hr4 + chrX 1962848 intron Hr4 + chrX_15_1955001 chrX_1955001 RAL-409_125b 2932 chrX 2385699 2385756 chrX 2385822 2385884 11 127 4.5 6.5 5.5 1.7 185 chrX 2385699 exon PsGEF - chrX 2385792 intron PsGEF - chrX 2385884 intron PsGEF - chrX_11_2385001 chrX_2385001 RAL-409_125b 2933 chrX 2399823 2399855 chrX 2408196 2408205 roo 7 8371 5.0 0.0 2.5 2.0 8382 chrX 2399823 intergenic not near genes chrX 2404014 intergenic not near genes chrX 2408205 intergenic not near genes chrX_7_2400001 chrX_2400001 RAL-409_125b 2934 chrX 2552760 2552785 chrX 2552928 2552952 7 171 5.5 2.5 4.0 1.4 192 chrX 2552760 intron Pdfr + chrX 2552856 intron Pdfr + chrX 2552952 intron Pdfr + chrX_7_2550001 chrX_2550001 RAL-409_125b 2935 chrX 2578775 2578835 chrX 2578916 2578977 16 138 2.5 7.0 4.8 2.8 202 chrX 2578775 intergenic Pdfr +,Vha36-3 - chrX 2578876 intergenic Vha36-3 -,Pdfr + chrX 2578977 intergenic Vha36-3 -,Pdfr + chrX_16_2575001 chrX_2575001 RAL-409_125b 2936 chrX 2610347 2610407 chrX 2617504 2617574 HMS-Beagle 6 7165 5.0 5.5 5.2 1.0 7227 chrX 2610347 intergenic CG8636 - chrX 2613960 intergenic not near genes chrX 2617574 intergenic Tsp3A - chrX_6_2610001 chrX_2610001 RAL-409_125b 2937 chrX 2664347 2664407 chrX 2665543 2665592 1360 16 1193 3.5 4.0 3.8 3.3 1245 chrX 2664347 intron sgg + chrX 2664970 intron sgg + chrX 2665592 intron sgg + chrX_16_2660001 chrX_2660001 RAL-409_125b 2938 chrX 2808889 2808921 chrX 2809011 2809041 10 135 10.5 10.0 10.2 0.9 152 chrX 2808889 intron kirre + chrX 2808965 intron kirre + chrX 2809041 intron kirre + chrX_10_2805001 chrX_2805001 RAL-409_125b 2939 chrX 2823749 2823764 chrX 2832347 2832362 roo 5 8595 11.0 4.5 7.8 0.6 8613 chrX 2823749 intron kirre + chrX 2828056 intron kirre + chrX 2832362 intron kirre + chrX_5_2825001 chrX_2825001 RAL-409_125b 2940 chrX 2823766 2823775 chrX 2832340 2832373 roo 4 8591 9.0 3.0 6.0 0.6 8607 chrX 2823766 intron kirre + chrX 2828070 intron kirre + chrX 2832373 intron kirre + chrX_4_2825001 chrX_2825001 RAL-409_125b 2941 chrX 2844883 2844921 chrX 2852327 2852381 mdg1 13 7457 5.5 4.0 4.8 2.2 7498 chrX 2844883 intron kirre + chrX 2848632 intron kirre + chrX 2852381 intron kirre + chrX_13_2845001 chrX_2845001 RAL-409_125b 2942 chrX 2917060 2917105 chrX 2917190 2917230 10 129 4.0 4.0 4.0 2.0 170 chrX 2917060 intron kirre + chrX 2917145 intron kirre + chrX 2917230 intron kirre + chrX_10_2915001 chrX_2915001 RAL-409_125b 2943 chrX 3031131 3031185 chrX 3031264 3031313 7 130 2.5 8.5 5.5 1.1 182 chrX 3031131 intron kirre + chrX 3031222 intron kirre + chrX 3031313 intron kirre + chrX_7_3030001 chrX_3030001 RAL-409_125b 2944 chrX 3057987 3058032 chrX 3058273 3058323 pogo 6 290 5.0 2.5 3.8 1.2 336 chrX 3057987 intron kirre + chrX 3058155 intron kirre + chrX 3058323 intron kirre + chrX_6_3055001 chrX_3055001 RAL-409_125b 2945 chrX 3082551 3082604 chrX 3082670 3082705 9 108 5.5 4.5 5.0 1.5 154 chrX 3082551 intron kirre + chrX 3082628 intron kirre + chrX 3082705 intron kirre + chrX_9_3080001 chrX_3080001 RAL-409_125b 2946 chrX 3103450 3103473 chrX 3103586 3103606 5 132 6.5 0.5 3.5 1.1 156 chrX 3103450 intron kirre + chrX 3103528 intron kirre + chrX 3103606 intron kirre + chrX_5_3100001 chrX_3100001 RAL-409_125b 2947 chrX 3109396 3109475 chrX 3109523 3109579 16 120 4.0 6.5 5.2 2.6 183 chrX 3109396 intron kirre + chrX 3109488 intron kirre + chrX 3109579 intron kirre + chrX_16_3105001 chrX_3105001 RAL-409_125b 2948 chrX 3206439 3206494 chrX 3206568 3206591 5 122 1.5 4.0 2.8 1.3 152 chrX 3206439 intron dnc + chrX 3206515 intron dnc + chrX 3206591 intron dnc + chrX_5_3205001 chrX_3205001 RAL-409_125b 2949 chrX 3208104 3208173 chrX 3208232 3208264 10 123 3.5 5.0 4.2 1.9 160 chrX 3208104 intron dnc + chrX 3208184 intron dnc + chrX 3208264 intron dnc + chrX_10_3205001 chrX_3205001 RAL-409_125b 2950 chrX 3218489 3218510 chrX 3227674 3227709 roo 5 9196 0.0 5.5 2.8 1.3 9220 chrX 3218489 intron dnc + chrX 3223099 intron dnc + chrX 3227709 intron dnc + chrX_5_3220001 chrX_3220001 RAL-409_125b 2951 chrX 3243616 3243640 chrX 3243756 3243779 7 140 5.5 8.0 6.8 0.9 163 chrX 3243616 intron dnc + chrX 3243698 intron dnc + chrX 3243779 intron dnc + chrX_7_3240001 chrX_3240001 RAL-409_125b 2952 chrX 3265390 3265439 chrX 3265546 3265595 4 156 1.5 3.5 2.5 1.1 205 chrX 3265390 intron dnc + chrX 3265492 intron dnc + chrX 3265595 intron dnc + chrX_4_3265001 chrX_3265001 RAL-409_125b 2953 chrX 3306028 3306312 chrX 3306189 3306444 4 137 9.5 18.5 14.0 0.3 416 chrX 3306028 intron dnc + chrX 3306236 intron dnc + chrX 3306444 intron dnc + chrX_4_3305001 chrX_3305001 RAL-409_125b 2954 chrX 3306340 3306375 chrX 3306472 3306487 6 127 1.0 0.0 0.5 4.0 147 chrX 3306340 intron dnc + chrX 3306414 intron dnc + chrX 3306487 intron dnc + chrX_6_3305001 chrX_3305001 RAL-409_125b 2955 chrX 3408936 3409016 chrX 3409062 3409129 14 117 4.5 4.5 4.5 2.5 193 chrX 3408936 intron,intron CR44999 +,CG12535 - chrX 3409032 intron,intron CR44999 +,CG12535 - chrX 3409129 intron,intron CR44999 +,CG12535 - chrX_14_3405001 chrX_3405001 RAL-409_125b 2956 chrX 3415011 3415042 chrX 3421235 3421277 3S18 11 6229 0.5 5.0 2.8 2.9 6266 chrX 3415011 intron,intron CR44999 +,CG12535 - chrX 3418144 intron,intron CR44999 +,CG12535 - chrX 3421277 intron,intron CR44999 +,CG12535 - chrX_11_3415001 chrX_3415001 RAL-409_125b 2957 chrX 3455543 3455564 chrX 3455677 3455698 8 130 2.0 9.5 5.8 1.2 155 chrX 3455543 intron CR44999 + chrX 3455620 intron CR44999 + chrX 3455698 intron CR44999 + chrX_8_3455001 chrX_3455001 RAL-409_125b 2958 chrX 3459942 3459957 chrX 3460064 3460084 4 125 11.0 6.5 8.8 0.4 142 chrX 3459942 intron,5` UTR CR44999 +,CG16782 - chrX 3460013 intron,intron CR44999 +,CG16782 - chrX 3460084 intron,5` UTR CR44999 +,CG16782 - chrX_4_3460001 chrX_3460001 RAL-409_125b 2959 chrX 3476304 3476373 chrX 3476437 3476498 13 131 1.5 4.0 2.8 3.4 194 chrX 3476304 intron CR44999 + chrX 3476401 intron CR44999 + chrX 3476498 intron,3` UTR CR44999 +,CG10804 - chrX_13_3475001 chrX_3475001 RAL-409_125b 2960 chrX 3493056 3493093 chrX 3502265 3502297 roo 5 9208 8.0 4.5 6.2 0.7 9241 chrX 3493056 intron,intron CR44999 +,Gas8 - chrX 3497676 intron,intron CR44999 +,Gas8 - chrX 3502297 intron,intron CR44999 +,Gas8 - chrX_5_3495001 chrX_3495001 RAL-409_125b 2961 chrX 3537527 3537597 chrX 3537664 3537702 14 132 5.0 5.0 5.0 2.3 175 chrX 3537527 intron CG32791 - chrX 3537614 intron CG32791 - chrX 3537702 intron CG32791 - chrX_14_3535001 chrX_3535001 RAL-409_125b 2962 chrX 3589957 3590011 chrX 3590134 3590158 10 164 6.5 8.5 7.5 1.2 201 chrX 3589957 intron AstA-R1 + chrX 3590058 intron AstA-R1 + chrX 3590158 intron AstA-R1 + chrX_10_3590001 chrX_3590001 RAL-409_125b 2963 chrX 3597511 3597583 chrX 3619729 3619766 roo 8 22206 5.0 4.5 4.8 1.4 22255 chrX 3597511 intron AstA-R1 + chrX 3608638 intron AstA-R1 + chrX 3619766 intron AstA-R1 + chrX_8_3605001 chrX_3605001 RAL-409_125b 2964 chrX 3646403 3646422 chrX 3646538 3646546 5 131 4.0 8.5 6.2 0.7 143 chrX 3646403 intron AstA-R1 + chrX 3646474 intron AstA-R1 + chrX 3646546 intron AstA-R1 + chrX_5_3645001 chrX_3645001 RAL-409_125b 2965 chrX 3713083 3713128 chrX 3713242 3713287 7 158 8.5 8.5 8.5 0.7 204 chrX 3713083 intron Rala - chrX 3713185 intron Rala - chrX 3713287 intron Rala - chrX_7_3710001 chrX_3710001 RAL-409_125b 2966 chrX 3726728 3726784 chrX 3730169 3730216 NOF 5 3441 3.5 6.5 5.0 0.8 3488 chrX 3726728 intron tlk + chrX 3728472 intron tlk + chrX 3730216 intron tlk + chrX_5_3725001 chrX_3725001 RAL-409_125b 2967 chrX 3744404 3744474 chrX 3744599 3744644 17 185 5.5 5.5 5.5 2.6 240 chrX 3744404 intron tlk + chrX 3744524 intron tlk + chrX 3744644 intron tlk + chrX_17_3740001 chrX_3740001 RAL-409_125b 2968 chrX 3842317 3842341 chrX 3842578 3842609 pogo 4 266 8.5 4.5 6.5 0.5 292 chrX 3842317 intron ec + chrX 3842463 intron ec + chrX 3842609 intron ec + chrX_4_3840001 chrX_3840001 RAL-409_125b 2969 chrX 3862787 3862843 chrX 3862924 3862980 5 137 6.0 10.0 8.0 0.6 193 chrX 3862787 intergenic yin - chrX 3862884 intergenic yin - chrX 3862980 3` UTR yin - chrX_5_3860001 chrX_3860001 RAL-409_125b 2970 chrX 3866055 3866127 chrX 3866183 3866224 11 121 3.5 2.0 2.8 2.9 169 chrX 3866055 intron yin - chrX 3866140 intron yin - chrX 3866224 intron yin - chrX_11_3865001 chrX_3865001 RAL-409_125b 2971 chrX 3874714 3874764 chrX 3874836 3874870 11 122 8.0 8.5 8.2 1.2 156 chrX 3874714 intron CG2930 + chrX 3874792 intron CG2930 + chrX 3874870 intron CG2930 + chrX_11_3870001 chrX_3870001 RAL-409_125b 2972 chrX 3915476 3915526 chrX 3915613 3915663 14 133 12.5 7.0 9.8 1.3 187 chrX 3915476 intron CG42541 - chrX 3915570 intron CG42541 - chrX 3915663 intron CG42541 - chrX_14_3915001 chrX_3915001 RAL-409_125b 2973 chrX 3986865 3986877 chrX 3994505 3994560 412 6 7673 3.5 3.5 3.5 1.3 7695 chrX 3986865 intergenic not near genes chrX 3990712 intergenic not near genes chrX 3994560 intergenic not near genes chrX_6_3990001 chrX_3990001 RAL-409_125b 2974 chrX 4048464 4048518 chrX 4048590 4048644 9 126 5.0 8.5 6.8 1.2 180 chrX 4048464 3` UTR CR45482 - chrX 4048554 3` UTR CR45482 - chrX 4048644 3` UTR CR45482 - chrX_9_4045001 chrX_4045001 RAL-409_125b 2975 chrX 4101820 4101895 chrX 4101949 4101980 6 120 3.0 4.0 3.5 1.3 160 chrX 4101820 exon CG15375 + chrX 4101900 exon CG15375 + chrX 4101980 exon CG15375 + chrX_6_4100001 chrX_4100001 RAL-409_125b 2976 chrX 4157848 4157920 chrX 4164951 4165022 297 10 7100 3.0 4.5 3.8 2.1 7174 chrX 4157848 intron Fas2 - chrX 4161435 intron Fas2 - chrX 4165022 intron Fas2 - chrX_10_4160001 chrX_4160001 RAL-409_125b 2977 chrX 4216302 4216332 chrX 4216426 4216456 7 126 5.0 7.0 6.0 1.0 154 chrX 4216302 intergenic not near genes chrX 4216379 intergenic CG15571 - chrX 4216456 intergenic CG15571 - chrX_7_4215001 chrX_4215001 RAL-409_125b 2978 chrX 4299458 4299525 chrX 4299972 4300041 7 510 4.5 5.5 5.0 1.2 583 chrX 4299458 intergenic not near genes chrX 4299750 intergenic CG12692 - chrX 4300041 intergenic CG12692 - chrX_7_4295001 chrX_4295001 RAL-409_125b 2979 chrX 4344303 4344364 chrX 4344431 4344497 17 128 5.0 3.5 4.2 3.3 194 chrX 4344303 intron norpA + chrX 4344400 intron norpA + chrX 4344497 intron norpA + chrX_17_4340001 chrX_4340001 RAL-409_125b 2980 chrX 4358045 4358075 chrX 4358197 4358217 5 150 8.5 0.0 4.2 1.0 172 chrX 4358045 intron norpA + chrX 4358131 intron norpA + chrX 4358217 intron norpA + chrX_5_4355001 chrX_4355001 RAL-409_125b 2981 chrX 4361400 4361425 chrX 4361527 4361549 6 128 7.5 3.5 5.5 0.9 149 chrX 4361400 intron norpA + chrX 4361474 intron norpA + chrX 4361549 intron norpA + chrX_6_4360001 chrX_4360001 RAL-409_125b 2982 chrX 4436467 4436497 chrX 4436594 4436610 7 124 3.0 8.0 5.5 1.1 143 chrX 4436467 intron,intron CR32773 -,bi + chrX 4436538 intron,intron CR32773 -,bi + chrX 4436610 intron,intron CR32773 -,bi + chrX_7_4435001 chrX_4435001 RAL-409_125b 2983 chrX 4525712 4525737 chrX 4525854 4525879 5 141 9.5 7.0 8.2 0.5 167 chrX 4525712 intron CR32773 - chrX 4525796 intron CR32773 - chrX 4525879 intron CR32773 - chrX_5_4525001 chrX_4525001 RAL-409_125b 2984 chrX 4535414 4535474 chrX 4535535 4535596 4 124 18.0 12.0 15.0 0.2 182 chrX 4535414 intron,3` UTR CR32773 -,CG3556 + chrX 4535505 intron CR32773 - chrX 4535596 intron CR32773 - chrX_4_4535001 chrX_4535001 RAL-409_125b 2985 chrX 4700348 4700424 chrX 4700741 4700782 jockey 18 389 2.5 3.0 2.8 4.7 434 chrX 4700348 3` UTR ctp + chrX 4700565 3` UTR ctp + chrX 4700782 3` UTR ctp + chrX_18_4700001 chrX_4700001 RAL-409_125b 2986 chrX 4792352 4792397 chrX 4792835 4792875 jockey 8 481 3.0 5.5 4.2 1.5 523 chrX 4792352 intergenic not near genes chrX 4792614 intergenic not near genes chrX 4792875 intergenic not near genes chrX_8_4790001 chrX_4790001 RAL-409_125b 2987 chrX 4827938 4827967 chrX 4835349 4835380 Stalker4 4 7416 9.5 4.5 7.0 0.5 7442 chrX 4827938 intergenic not near genes chrX 4831659 intergenic not near genes chrX 4835380 intergenic not near genes chrX_4_4830001 chrX_4830001 RAL-409_125b 2988 chrX 4827968 4827995 chrX 4835346 4835389 Stalker4 13 7388 6.0 3.5 4.8 2.2 7421 chrX 4827968 intergenic not near genes chrX 4831678 intergenic not near genes chrX 4835389 intergenic not near genes chrX_13_4830001 chrX_4830001 RAL-409_125b 2989 chrX 4856109 4856147 chrX 4856224 4856225 4 96 3.5 1.0 2.2 1.2 116 chrX 4856109 intron CG42594 + chrX 4856167 intron CG42594 + chrX 4856225 intron CG42594 + chrX_4_4855001 chrX_4855001 RAL-409_125b 2990 chrX 4871167 4871231 chrX 4871306 4871381 13 147 1.5 0.0 0.8 7.2 214 chrX 4871167 intron CG42594 + chrX 4871274 intron CG42594 + chrX 4871381 intron CG42594 + chrX_13_4870001 chrX_4870001 RAL-409_125b 2991 chrX 4946530 4946606 chrX 4946659 4946719 17 119 6.0 8.0 7.0 2.1 189 chrX 4946530 intron Ptp4E + chrX 4946624 intron Ptp4E + chrX 4946719 intron Ptp4E + chrX_17_4945001 chrX_4945001 RAL-409_125b 2992 chrX 4961808 4961865 chrX 4962047 4962107 19 245 4.0 7.0 5.5 2.9 299 chrX 4961808 intron CR44833 - chrX 4961958 intron CR44833 - chrX 4962107 intron CR44833 - chrX_19_4960001 chrX_4960001 RAL-409_125b 2993 chrX 4990000 4990057 chrX 4997264 4997321 roo 8 7264 3.5 3.0 3.2 1.9 7321 chrX 4990000 intron CR44833 - chrX 4993660 intron CR44833 - chrX 4997321 intron CR44833 - chrX_8_4990001 chrX_4990001 RAL-409_125b 2994 chrX 5040980 5041040 chrX 5041105 5041137 10 118 6.5 8.0 7.2 1.2 157 chrX 5040980 intron CR44833 - chrX 5041058 intron CR44833 - chrX 5041137 intron CR44833 - chrX_10_5040001 chrX_5040001 RAL-409_125b 2995 chrX 5096257 5096303 chrX 5103839 5103915 springer 7 7608 1.0 3.5 2.2 2.2 7658 chrX 5096257 intron,intron CG15465 +,rg + chrX 5100086 intron,intron CG15465 +,rg + chrX 5103915 intron,intron CG15465 +,rg + chrX_7_5100001 chrX_5100001 RAL-409_125b 2996 chrX 5122782 5122845 chrX 5123049 5123118 8 272 1.5 2.5 2.0 2.7 336 chrX 5122782 intron,intron CG15465 +,rg + chrX 5122950 intron,intron CG15465 +,rg + chrX 5123118 intron,intron CG15465 +,rg + chrX_8_5120001 chrX_5120001 RAL-409_125b 2997 chrX 5159690 5159751 chrX 5159830 5159896 15 143 2.5 5.5 4.0 3.0 206 chrX 5159690 intron,intron CG15465 +,rg + chrX 5159793 intron,intron CG15465 +,rg + chrX 5159896 intron,intron CG15465 +,rg + chrX_15_5155001 chrX_5155001 RAL-409_125b 2998 chrX 5277510 5277573 chrX 5277733 5277796 7 221 5.5 5.5 5.5 1.1 286 chrX 5277510 intergenic not near genes chrX 5277653 intergenic not near genes chrX 5277796 intergenic not near genes chrX_7_5275001 chrX_5275001 RAL-409_125b 2999 chrX 5280097 5280146 chrX 5280351 5280412 7 261 3.5 3.5 3.5 1.6 315 chrX 5280097 intergenic not near genes chrX 5280254 intergenic not near genes chrX 5280412 intergenic not near genes chrX_7_5280001 chrX_5280001 RAL-409_125b 3000 chrX 5291459 5291719 chrX 5291592 5291840 9 126 7.5 4.0 5.8 1.3 381 chrX 5291459 intergenic not near genes chrX 5291650 intergenic not near genes chrX 5291840 intergenic not near genes chrX_9_5290001 chrX_5290001 RAL-409_125b 3001 chrX 5338680 5338726 chrX 5339972 5340001 jockey 10 1292 5.5 5.0 5.2 1.6 1321 chrX 5338680 intergenic not near genes chrX 5339340 intergenic not near genes chrX 5340001 intergenic SK + chrX_10_5335001 chrX_5335001 RAL-409_125b 3002 chrX 5350286 5350313 chrX 5350435 5350455 6 153 5.5 8.0 6.8 0.8 169 chrX 5350286 intron SK + chrX 5350370 intron SK + chrX 5350455 intron SK + chrX_6_5350001 chrX_5350001 RAL-409_125b 3003 chrX 5469582 5469643 chrX 5469791 5469833 6 212 2.5 1.5 2.0 2.0 251 chrX 5469582 intron SPR + chrX 5469708 intron SPR + chrX 5469833 intron SPR + chrX_6_5465001 chrX_5465001 RAL-409_125b 3004 chrX 5473541 5473609 chrX 5473667 5473733 12 122 4.5 6.5 5.5 1.8 192 chrX 5473541 intron SPR + chrX 5473637 intron SPR + chrX 5473733 intron SPR + chrX_12_5470001 chrX_5470001 RAL-409_125b 3005 chrX 5481068 5481070 chrX 5485082 5485091 I-element 5 4019 0.0 8.0 4.0 1.0 4023 chrX 5481068 intron SPR + chrX 5483080 intron SPR + chrX 5485091 intron SPR + chrX_5_5480001 chrX_5480001 RAL-409_125b 3006 chrX 5485227 5485278 chrX 5485352 5485384 7 119 3.0 8.0 5.5 1.1 157 chrX 5485227 intron SPR + chrX 5485306 intron SPR + chrX 5485384 intron SPR + chrX_7_5485001 chrX_5485001 RAL-409_125b 3007 chrX 5524803 5524834 chrX 5528716 5528736 412 8 3910 9.0 2.5 5.8 1.2 3933 chrX 5524803 intergenic snoRNA:Psi28S-3342 - chrX 5526770 intergenic not near genes chrX 5528736 intergenic Vsx2 - chrX_8_5525001 chrX_5525001 RAL-409_125b 3008 chrX 5596479 5596515 chrX 5596599 5596639 8 122 9.0 11.0 10.0 0.7 160 chrX 5596479 intron Vsx1 + chrX 5596559 intron Vsx1 + chrX 5596639 intron Vsx1 + chrX_8_5595001 chrX_5595001 RAL-409_125b 3009 chrX 5727373 5727415 chrX 5732162 5732204 Doc 14 4787 6.5 6.0 6.2 1.9 4831 chrX 5727373 intron CG32758 - chrX 5729788 intron CG32758 - chrX 5732204 intron CG32758 - chrX_14_5725001 chrX_5725001 RAL-409_125b 3010 chrX 5798852 5798867 chrX 5799052 5799079 5 210 1.0 4.0 2.5 1.4 227 chrX 5798852 intergenic not near genes chrX 5798966 intergenic not near genes chrX 5799079 intergenic not near genes chrX_5_5795001 chrX_5795001 RAL-409_125b 3011 chrX 5883765 5883833 chrX 5884056 5884124 pogo 12 285 4.0 4.0 4.0 2.4 359 chrX 5883765 intron CR45668 - chrX 5883944 intron CR45668 - chrX 5884124 intron CR45668 - chrX_12_5880001 chrX_5880001 RAL-409_125b 3012 chrX 5884124 5884182 chrX 5884409 5884468 pogo 9 286 7.5 4.5 6.0 1.3 344 chrX 5884124 intron CR45668 - chrX 5884296 intron CR45668 - chrX 5884468 intron CR45668 - chrX_9_5880001 chrX_5880001 RAL-409_125b 3013 chrX 6080787 6080811 chrX 6080921 6080940 4 128 8.5 7.5 8.0 0.4 153 chrX 6080787 intron CG4660 - chrX 6080864 intron CG4660 - chrX 6080940 intron CG4660 - chrX_4_6080001 chrX_6080001 RAL-409_125b 3014 chrX 6118658 6118724 chrX 6118790 6118835 17 124 4.0 4.5 4.2 3.3 177 chrX 6118658 intron Ca-alpha1T - chrX 6118746 intron Ca-alpha1T - chrX 6118835 intron Ca-alpha1T - chrX_17_6115001 chrX_6115001 RAL-409_125b 3015 chrX 6171547 6171605 chrX 6179025 6179088 Quasimodo 11 7474 7.0 5.0 6.0 1.6 7541 chrX 6171547 intron Ca-alpha1T - chrX 6175318 intron Ca-alpha1T - chrX 6179088 intron Ca-alpha1T - chrX_11_6175001 chrX_6175001 RAL-409_125b 3016 chrX 6320019 6320079 chrX 6320177 6320237 8 152 4.0 8.0 6.0 1.1 218 chrX 6320019 intron CG15894 + chrX 6320128 intron CG15894 + chrX 6320237 intron CG15894 + chrX_8_6320001 chrX_6320001 RAL-409_125b 3017 chrX 6388624 6388694 chrX 6388750 6388820 15 125 4.0 3.0 3.5 3.3 196 chrX 6388624 intergenic not near genes chrX 6388722 intergenic not near genes chrX 6388820 intergenic not near genes chrX_15_6385001 chrX_6385001 RAL-409_125b 3018 chrX 6392826 6392883 chrX 6397641 6397698 Doc 16 4812 7.5 3.5 5.5 2.5 4872 chrX 6392826 intergenic not near genes chrX 6395262 intergenic not near genes chrX 6397698 intergenic not near genes chrX_16_6395001 chrX_6395001 RAL-409_125b 3019 chrX 6429975 6429993 chrX 6435483 6435505 Rt1c 4 5506 8.0 7.5 7.8 0.5 5530 chrX 6429975 intron CG42340 - chrX 6432740 intron CG42340 - chrX 6435505 intron CG42340 - chrX_4_6430001 chrX_6430001 RAL-409_125b 3020 chrX 6539871 6539943 chrX 6540023 6540095 15 148 7.5 5.0 6.2 2.1 224 chrX 6539871 intergenic not near genes chrX 6539983 intergenic not near genes chrX 6540095 intergenic not near genes chrX_15_6535001 chrX_6535001 RAL-409_125b 3021 chrX 6562787 6562847 chrX 6571314 6571344 Tirant 18 8522 3.5 5.5 4.5 3.3 8557 chrX 6562787 intron CG34417 + chrX 6567066 intron CG34417 + chrX 6571344 intron CG34417 + chrX_18_6565001 chrX_6565001 RAL-409_125b 3022 chrX 6591804 6591855 chrX 6591939 6591990 8 134 6.0 0.0 3.0 2.0 186 chrX 6591804 intron Pat1 + chrX 6591897 intron Pat1 + chrX 6591990 intron Pat1 + chrX_8_6590001 chrX_6590001 RAL-409_125b 3023 chrX 6605465 6605498 chrX 6608537 6608565 Burdock 5 3072 1.0 5.5 3.2 1.2 3100 chrX 6605465 intron pigs + chrX 6607015 intron pigs + chrX 6608565 intron pigs + chrX_5_6605001 chrX_6605001 RAL-409_125b 3024 chrX 6618426 6618475 chrX 6618554 6618593 17 124 8.0 11.5 9.8 1.6 167 chrX 6618426 intron pigs + chrX 6618510 intron pigs + chrX 6618593 intron pigs + chrX_17_6615001 chrX_6615001 RAL-409_125b 3025 chrX 6629739 6629786 chrX 6629874 6629923 10 136 6.0 1.0 3.5 2.2 184 chrX 6629739 intron pigs + chrX 6629831 intron pigs + chrX 6629923 intron pigs + chrX_10_6625001 chrX_6625001 RAL-409_125b 3026 chrX 6652982 6653020 chrX 6653108 6653146 4 126 3.0 4.5 3.8 0.8 164 chrX 6652982 3` UTR pigs + chrX 6653064 intergenic CG3226 -,pigs + chrX 6653146 3` UTR CG3226 - chrX_4_6650001 chrX_6650001 RAL-409_125b 3027 chrX 6733429 6733653 chrX 6733543 6733788 6 125 9.0 8.5 8.8 0.6 359 chrX 6733429 intron,intron CG3168 -,CR43461 + chrX 6733608 intron,intron CG3168 -,CR43461 + chrX 6733788 intron,intron CG3168 -,CR43461 + chrX_6_6730001 chrX_6730001 RAL-409_125b 3028 chrX 6792042 6792091 chrX 6792183 6792232 5 140 3.0 1.5 2.2 1.6 190 chrX 6792042 intron C3G - chrX 6792137 intron C3G - chrX 6792232 intron C3G - chrX_5_6790001 chrX_6790001 RAL-409_125b 3029 chrX 6814265 6814282 chrX 6814420 6814437 4 154 4.0 2.5 3.2 1.0 172 chrX 6814265 intron iav + chrX 6814351 intron iav + chrX 6814437 intron iav + chrX_4_6810001 chrX_6810001 RAL-409_125b 3030 chrX 6865741 6865792 chrX 6865872 6865926 9 132 8.5 4.0 6.2 1.2 185 chrX 6865741 intron CG14434 - chrX 6865834 intron CG14434 - chrX 6865926 intron CG14434 - chrX_9_6865001 chrX_6865001 RAL-409_125b 3031 chrX 6897282 6897571 chrX 6897625 6897694 4 290 4.0 4.0 4.0 0.8 412 chrX 6897282 intergenic not near genes chrX 6897488 intergenic not near genes chrX 6897694 intergenic not near genes chrX_4_6895001 chrX_6895001 RAL-409_125b 3032 chrX 6897645 6897711 chrX 6897798 6897871 13 153 4.0 2.5 3.2 3.1 226 chrX 6897645 intergenic not near genes chrX 6897758 intergenic not near genes chrX 6897871 intergenic not near genes chrX_13_6895001 chrX_6895001 RAL-409_125b 3033 chrX 6901329 6901377 chrX 6901455 6901503 7 121 5.5 8.5 7.0 0.9 174 chrX 6901329 intergenic not near genes chrX 6901416 intergenic not near genes chrX 6901503 intergenic not near genes chrX_7_6900001 chrX_6900001 RAL-409_125b 3034 chrX 6907099 6907122 chrX 6907309 6907341 5 230 7.0 6.0 6.5 0.7 242 chrX 6907099 intergenic not near genes chrX 6907220 intergenic not near genes chrX 6907341 intergenic not near genes chrX_5_6905001 chrX_6905001 RAL-409_125b 3035 chrX 6984595 6984644 chrX 6984704 6984771 9 123 5.5 6.5 6.0 1.3 176 chrX 6984595 intron ogre - chrX 6984683 intron ogre - chrX 6984771 intron ogre - chrX_9_6980001 chrX_6980001 RAL-409_125b 3036 chrX 6989472 6989530 chrX 6989604 6989667 13 135 3.0 5.0 4.0 2.6 195 chrX 6989472 intron ogre - chrX 6989570 intron ogre - chrX 6989667 intron ogre - chrX_13_6985001 chrX_6985001 RAL-409_125b 3037 chrX 7023565 7023616 chrX 7031005 7031051 Tabor 14 7437 4.0 6.5 5.2 2.3 7486 chrX 7023565 intron CG12541 - chrX 7027308 intron CG12541 - chrX 7031051 intron CG12541 - chrX_14_7025001 chrX_7025001 RAL-409_125b 3038 chrX 7125229 7125267 chrX 7134428 7134470 roo 4 9201 0.0 14.5 7.2 0.5 9241 chrX 7125229 intergenic not near genes chrX 7129850 intergenic not near genes chrX 7134470 intergenic not near genes chrX_4_7125001 chrX_7125001 RAL-409_125b 3039 chrX 7235520 7235541 chrX 7235654 7235678 6 136 5.0 4.5 4.8 1.0 158 chrX 7235520 intron,intron CG9650 +,CR44357 - chrX 7235599 intron,intron CG9650 +,CR44357 - chrX 7235678 intron,intron CG9650 +,CR44357 - chrX_6_7235001 chrX_7235001 RAL-409_125b 3040 chrX 7268324 7268354 chrX 7268452 7268482 7 127 10.5 4.0 7.2 0.9 158 chrX 7268324 intron CR44357 - chrX 7268403 intron CR44357 - chrX 7268482 intron CR44357 - chrX_7_7265001 chrX_7265001 RAL-409_125b 3041 chrX 7268355 7268368 chrX 7268447 7268496 4 114 7.5 5.0 6.2 0.6 141 chrX 7268355 intron CR44357 - chrX 7268426 intron CR44357 - chrX 7268496 intron CR44357 - chrX_4_7265001 chrX_7265001 RAL-409_125b 3042 chrX 7268378 7268388 chrX 7268445 7268516 4 113 7.0 5.0 6.0 0.6 138 chrX 7268378 intron CR44357 - chrX 7268447 intron CR44357 - chrX 7268516 intron CR44357 - chrX_4_7265001 chrX_7265001 RAL-409_125b 3043 chrX 7294494 7294515 chrX 7294617 7294651 5 131 5.5 9.0 7.2 0.6 157 chrX 7294494 intron,intron CR44357 -,CG1677 - chrX 7294572 intron,intron CR44357 -,CG1677 - chrX 7294651 intron,intron CR44357 -,CG1677 - chrX_5_7290001 chrX_7290001 RAL-409_125b 3044 chrX 7702451 7702518 chrX 7702605 7702660 10 148 0.0 6.0 3.0 2.5 209 chrX 7702451 intron CHES-1-like - chrX 7702556 intron CHES-1-like - chrX 7702660 intron CHES-1-like - chrX_10_7700001 chrX_7700001 RAL-409_125b 3045 chrX 7702869 7702923 chrX 7703356 7703412 jockey 11 488 11.5 7.0 9.2 1.1 543 chrX 7702869 intron CHES-1-like - chrX 7703140 intron CHES-1-like - chrX 7703412 intron CHES-1-like - chrX_11_7700001 chrX_7700001 RAL-409_125b 3046 chrX 7784188 7784252 chrX 7784537 7784604 jockey 4 352 0.0 5.5 2.8 1.1 416 chrX 7784188 intergenic not near genes chrX 7784396 intergenic not near genes chrX 7784604 intergenic not near genes chrX_4_7780001 chrX_7780001 RAL-409_125b 3047 chrX 7832401 7832459 chrX 7832534 7832592 25 136 2.0 2.0 2.0 8.3 191 chrX 7832401 intron CG1402 + chrX 7832496 intron CG1402 + chrX 7832592 intron CG1402 + chrX_25_7830001 chrX_7830001 RAL-409_125b 3048 chrX 7845711 7845751 chrX 7847247 7847292 hopper2 7 1540 4.5 4.5 4.5 1.3 1581 chrX 7845711 intergenic not near genes chrX 7846502 intergenic not near genes chrX 7847292 intergenic not near genes chrX_7_7845001 chrX_7845001 RAL-409_125b 3049 chrX 7881813 7881876 chrX 7881947 7882005 9 132 2.0 5.5 3.8 1.9 192 chrX 7881813 intergenic Ir7f -,Ir7e - chrX 7881909 intergenic Ir7f -,Ir7e - chrX 7882005 3` UTR Ir7f - chrX_9_7880001 chrX_7880001 RAL-409_125b 3050 chrX 7960832 7960907 chrX 7960971 7961026 20 136 4.0 7.0 5.5 3.1 194 chrX 7960832 intron,5` UTR sws -,CR45620 + chrX 7960929 intron sws - chrX 7961026 intron sws - chrX_20_7960001 chrX_7960001 RAL-409_125b 3051 chrX 8031403 8031451 chrX 8035762 8035810 Juan 9 4356 3.5 4.5 4.0 1.8 4407 chrX 8031403 intergenic not near genes chrX 8033606 intergenic not near genes chrX 8035810 3` UTR CG2233 - chrX_9_8030001 chrX_8030001 RAL-409_125b 3052 chrX 8085536 8085544 chrX 8085672 8085680 6 135 12.0 7.0 9.5 0.6 144 chrX 8085536 intron,5` UTR CG2256 -,CR45535 + chrX 8085608 intron,5` UTR CG2256 -,CR45535 + chrX 8085680 intron,5` UTR CG2256 -,CR45535 + chrX_6_8085001 chrX_8085001 RAL-409_125b 3053 chrX 8085548 8085600 chrX 8085668 8085736 13 134 3.0 6.5 4.8 2.2 188 chrX 8085548 intron,5` UTR CG2256 -,CR45535 + chrX 8085642 intron,5` UTR CG2256 -,CR45535 + chrX 8085736 intron,5` UTR CG2256 -,CR45535 + chrX_13_8085001 chrX_8085001 RAL-409_125b 3054 chrX 8195454 8195496 chrX 8195568 8195624 9 121 6.5 3.0 4.8 1.6 170 chrX 8195454 intron sdt + chrX 8195539 intron sdt + chrX 8195624 intron sdt + chrX_9_8195001 chrX_8195001 RAL-409_125b 3055 chrX 8544103 8544155 chrX 8544227 8544267 7 125 2.5 8.0 5.2 1.1 164 chrX 8544103 intron Nrg + chrX 8544185 intron Nrg + chrX 8544267 intron Nrg + chrX_7_8540001 chrX_8540001 RAL-409_125b 3056 chrX 8562622 8562678 chrX 8562749 8562798 12 125 3.0 3.0 3.0 3.0 176 chrX 8562622 intron Trf4-1 + chrX 8562710 intron Trf4-1 + chrX 8562798 intron Trf4-1 + chrX_12_8560001 chrX_8560001 RAL-409_125b 3057 chrX 8705665 8705687 chrX 8706158 8706178 5 495 3.0 1.5 2.2 1.6 513 chrX 8705665 intergenic not near genes chrX 8705922 intergenic not near genes chrX 8706178 intergenic not near genes chrX_5_8705001 chrX_8705001 RAL-409_125b 3058 chrX 8832224 8832242 chrX 8832350 8832358 4 122 6.5 3.5 5.0 0.7 134 chrX 8832224 intergenic not near genes chrX 8832291 intergenic not near genes chrX 8832358 intergenic not near genes chrX_4_8830001 chrX_8830001 RAL-409_125b 3059 chrX 8860775 8860788 chrX 8860909 8860922 4 132 0.0 9.5 4.8 0.7 147 chrX 8860775 intron CG12075 + chrX 8860848 intron CG12075 + chrX 8860922 intron CG12075 + chrX_4_8860001 chrX_8860001 RAL-409_125b 3060 chrX 8888602 8888660 chrX 8888729 8888787 13 126 1.5 7.0 4.2 2.5 185 chrX 8888602 intron Moe - chrX 8888694 intron Moe - chrX 8888787 intron Moe - chrX_13_8885001 chrX_8885001 RAL-409_125b 3061 chrX 8922293 8922349 chrX 8922768 8922833 jockey 14 480 5.5 5.0 5.2 2.3 540 chrX 8922293 intron rdgA + chrX 8922563 intron rdgA + chrX 8922833 intron rdgA + chrX_14_8920001 chrX_8920001 RAL-409_125b 3062 chrX 8948713 8948780 chrX 8956272 8956338 roo 15 7558 0.0 4.0 2.0 5.0 7625 chrX 8948713 intron rdgA + chrX 8952526 intron rdgA + chrX 8956338 intron rdgA + chrX_15_8950001 chrX_8950001 RAL-409_125b 3063 chrX 8968825 8968945 chrX 8968942 8969099 4 124 1.5 1.5 1.5 1.6 274 chrX 8968825 intron rdgA + chrX 8968962 intron rdgA + chrX 8969099 intron rdgA + chrX_4_8965001 chrX_8965001 RAL-409_125b 3064 chrX 9062684 9062725 chrX 9062812 9062853 6 128 2.5 1.0 1.8 2.1 169 chrX 9062684 intron CG15365 - chrX 9062768 intron CG15365 - chrX 9062853 intron CG15365 - chrX_6_9060001 chrX_9060001 RAL-409_125b 3065 chrX 9229863 9229925 chrX 9229992 9230055 14 128 5.0 3.5 4.2 2.7 192 chrX 9229863 intron CG12121 - chrX 9229959 intron CG12121 - chrX 9230055 intron CG12121 - chrX_14_9225001 chrX_9225001 RAL-409_125b 3066 chrX 9289671 9289714 chrX 9289799 9289841 6 128 3.0 8.0 5.5 0.9 170 chrX 9289671 intron lz + chrX 9289756 intron lz + chrX 9289841 intron lz + chrX_6_9285001 chrX_9285001 RAL-409_125b 3067 chrX 9337901 9337965 chrX 9338039 9338107 12 134 6.5 6.0 6.2 1.7 206 chrX 9337901 intron CG34449 - chrX 9338004 intron CG34449 - chrX 9338107 exon CG34449 - chrX_12_9335001 chrX_9335001 RAL-409_125b 3068 chrX 9342900 9342921 chrX 9342991 9343032 7 96 1.0 2.5 1.8 2.5 132 chrX 9342900 intron CG34449 - chrX 9342966 intron CG34449 - chrX 9343032 intron CG34449 - chrX_7_9340001 chrX_9340001 RAL-409_125b 3069 chrX 9430200 9430219 chrX 9430635 9430665 4 443 9.5 5.5 7.5 0.5 465 chrX 9430200 intron mgl - chrX 9430432 intron mgl - chrX 9430665 intron mgl - chrX_4_9430001 chrX_9430001 RAL-409_125b 3070 chrX 9481687 9481750 chrX 9481823 9481864 15 125 10.5 5.5 8.0 1.7 177 chrX 9481687 intron mgl - chrX 9481776 intron mgl - chrX 9481864 intron mgl - chrX_15_9480001 chrX_9480001 RAL-409_125b 3071 chrX 9503211 9503211 chrX 22383088 22383375 7 12880038 14.5 137.0 75.8 0.1 12880164 chrX 9503211 3` UTR CG32700 - chrX 15943293 intron CG8924 + chrX 22383375 intergenic not near genes chrX_7_15940001 chrX_15940001 RAL-409_125b 3072 chrX 9508109 9508150 chrX 9509672 9509711 jockey 11 1562 7.0 7.0 7.0 1.4 1602 chrX 9508109 intron CG32700 - chrX 9508910 intron CG32700 - chrX 9509711 intron CG32700 - chrX_11_9505001 chrX_9505001 RAL-409_125b 3073 chrX 9527887 9527937 chrX 9528006 9528056 8 123 6.0 3.0 4.5 1.5 169 chrX 9527887 intron CG32700 - chrX 9527972 intron CG32700 - chrX 9528056 intron CG32700 - chrX_8_9525001 chrX_9525001 RAL-409_125b 3074 chrX 9575770 9575813 chrX 9576117 9576187 mdg3 10 361 6.0 5.5 5.8 1.5 417 chrX 9575770 intron,exon CG32699 -,CG42395 - chrX 9575978 intron,intron CG32699 -,CG42395 - chrX 9576187 intron,5` UTR CG32699 -,CG42395 - chrX_10_9575001 chrX_9575001 RAL-409_125b 3075 chrX 9732333 9732380 chrX 9732459 9732497 7 122 0.5 3.0 1.8 2.5 164 chrX 9732333 intron Sp1 + chrX 9732415 intron Sp1 + chrX 9732497 intron Sp1 + chrX_7_9730001 chrX_9730001 RAL-409_125b 3076 chrX 9784135 9784141 chrX 9784367 9784370 4 233 13.0 5.0 9.0 0.4 235 chrX 9784135 intron CG32698 + chrX 9784252 intron CG32698 + chrX 9784370 intron CG32698 + chrX_4_9780001 chrX_9780001 RAL-409_125b 3077 chrX 9784153 9784200 chrX 9784364 9784438 9 230 5.0 4.0 4.5 1.6 285 chrX 9784153 intron CG32698 + chrX 9784296 intron CG32698 + chrX 9784438 intron CG32698 + chrX_9_9780001 chrX_9780001 RAL-409_125b 3078 chrX 9791815 9791877 chrX 9791964 9792010 10 145 8.5 4.5 6.5 1.3 195 chrX 9791815 intron CG32698 + chrX 9791912 intron CG32698 + chrX 9792010 intron CG32698 + chrX_10_9790001 chrX_9790001 RAL-409_125b 3079 chrX 9839318 9839329 chrX 9839446 9839462 4 132 2.0 5.5 3.8 0.8 144 chrX 9839318 intron CG32698 + chrX 9839390 intron CG32698 + chrX 9839462 intron CG32698 + chrX_4_9835001 chrX_9835001 RAL-409_125b 3080 chrX 10138199 10138232 chrX 10145753 10145776 412 5 7550 5.5 1.5 3.5 1.1 7577 chrX 10138199 intron,intron RhoU +,CR44894 - chrX 10141988 intron,intron RhoU +,CR44894 - chrX 10145776 intron,intron RhoU +,CR44894 - chrX_5_10140001 chrX_10140001 RAL-409_125b 3081 chrX 10229806 10229859 chrX 10229936 10229989 12 128 5.0 2.0 3.5 2.7 183 chrX 10229806 3` UTR CG34408 + chrX 10229898 3` UTR CG34408 + chrX 10229989 3` UTR CG34408 + chrX_12_10225001 chrX_10225001 RAL-409_125b 3082 chrX 10285837 10285906 chrX 10286223 10286285 4 382 2.5 2.0 2.2 1.2 448 chrX 10285837 intron alpha-Man-I - chrX 10286061 intron alpha-Man-I - chrX 10286285 intron alpha-Man-I - chrX_4_10285001 chrX_10285001 RAL-409_125b 3083 chrX 10317504 10317552 chrX 10317633 10317675 10 126 5.5 4.0 4.8 1.7 171 chrX 10317504 intron alpha-Man-I - chrX 10317590 intron alpha-Man-I - chrX 10317675 intron alpha-Man-I - chrX_10_10315001 chrX_10315001 RAL-409_125b 3084 chrX 10348761 10348797 chrX 10356376 10356397 springer 5 7605 5.0 3.5 4.2 1.0 7636 chrX 10348761 intergenic snoRNA:U3:9B + chrX 10352579 intergenic not near genes chrX 10356397 intergenic l(1)G0289 - chrX_5_10350001 chrX_10350001 RAL-409_125b 3085 chrX 10369062 10369122 chrX 10369279 10369306 17 210 8.5 6.5 7.5 2.0 244 chrX 10369062 intron CG17841 + chrX 10369184 intron CG17841 + chrX 10369306 intron CG17841 + chrX_17_10365001 chrX_10365001 RAL-409_125b 3086 chrX 10401355 10401424 chrX 10401486 10401555 17 129 9.5 8.5 9.0 1.7 200 chrX 10401355 intron flw + chrX 10401455 intron flw + chrX 10401555 intron flw + chrX_17_10400001 chrX_10400001 RAL-409_125b 3087 chrX 10489580 10489622 chrX 10489749 10489769 6 166 6.0 3.0 4.5 1.1 189 chrX 10489580 intergenic not near genes chrX 10489674 intergenic not near genes chrX 10489769 intergenic not near genes chrX_6_10485001 chrX_10485001 RAL-409_125b 3088 chrX 10506487 10506523 chrX 10506593 10506629 5 116 4.5 5.5 5.0 0.8 142 chrX 10506487 intron spri - chrX 10506558 intron spri - chrX 10506629 intron spri - chrX_5_10505001 chrX_10505001 RAL-409_125b 3089 chrX 10525022 10525046 chrX 10532143 10532169 297 6 7117 6.5 3.5 5.0 1.0 7147 chrX 10525022 intron spri - chrX 10528596 intron spri - chrX 10532169 intron spri - chrX_6_10525001 chrX_10525001 RAL-409_125b 3090 chrX 10550285 10550358 chrX 10550413 10550477 16 127 2.5 5.0 3.8 3.3 192 chrX 10550285 intron spri - chrX 10550381 intron spri - chrX 10550477 intron spri - chrX_16_10550001 chrX_10550001 RAL-409_125b 3091 chrX 10550817 10550880 chrX 10552334 10552362 hobo 16 1512 3.5 4.0 3.8 3.3 1545 chrX 10550817 intron spri - chrX 10551590 intron spri - chrX 10552362 intron spri - chrX_16_10550001 chrX_10550001 RAL-409_125b 3092 chrX 10584420 10584484 chrX 10584547 10584595 16 118 4.5 6.5 5.5 2.5 175 chrX 10584420 intron spri - chrX 10584508 intron spri - chrX 10584595 intron spri - chrX_16_10580001 chrX_10580001 RAL-409_125b 3093 chrX 10686007 10686054 chrX 10691194 10691241 roo 14 5185 7.5 7.0 7.2 1.7 5234 chrX 10686007 intron X11Lbeta + chrX 10688624 intron X11Lbeta + chrX 10691241 intron X11Lbeta + chrX_14_10685001 chrX_10685001 RAL-409_125b 3094 chrX 10772663 10772692 chrX 10772768 10772788 Tirant 5 105 4.0 2.5 3.2 1.2 125 chrX 10772663 intron CG15211 + chrX 10772726 intron CG15211 + chrX 10772788 intron CG15211 + chrX_5_10770001 chrX_10770001 RAL-409_125b 3095 chrX 11034253 11034314 chrX 11034618 11034694 14 374 5.5 5.0 5.2 2.3 441 chrX 11034253 intron CG42339 - chrX 11034474 intron CG42339 - chrX 11034694 intron CG42339 - chrX_14_11030001 chrX_11030001 RAL-409_125b 3096 chrX 11095955 11096024 chrX 11103107 11103115 HMS-Beagle 11 7144 1.5 5.0 3.2 2.6 7160 chrX 11095955 intergenic not near genes chrX 11099535 intergenic not near genes chrX 11103115 intron CG42249 + chrX_11_11095001 chrX_11095001 RAL-409_125b 3097 chrX 11165831 11165887 chrX 11166213 11166269 5 381 5.5 7.5 6.5 0.7 438 chrX 11165831 intergenic not near genes chrX 11166050 intergenic not near genes chrX 11166269 intergenic not near genes chrX_5_11165001 chrX_11165001 RAL-409_125b 3098 chrX 11169808 11169886 chrX 11169937 11170013 15 118 5.5 5.0 5.2 2.4 205 chrX 11169808 intergenic CG1394 - chrX 11169910 3` UTR CG1394 - chrX 11170013 exon CG1394 - chrX_15_11165001 chrX_11165001 RAL-409_125b 3099 chrX 11180057 11180124 chrX 11180303 11180364 14 244 5.5 7.0 6.2 1.9 307 chrX 11180057 intergenic not near genes chrX 11180210 intergenic not near genes chrX 11180364 intergenic not near genes chrX_14_11180001 chrX_11180001 RAL-409_125b 3100 chrX 11214955 11215012 chrX 11215352 11215423 14 409 3.5 6.5 5.0 2.3 468 chrX 11214955 intergenic not near genes chrX 11215189 intergenic not near genes chrX 11215423 intergenic not near genes chrX_14_11215001 chrX_11215001 RAL-409_125b 3101 chrX 11268541 11268592 chrX 11270074 11270120 hopper2 11 1532 0.5 5.0 2.8 2.9 1579 chrX 11268541 intron CG44422 - chrX 11269330 intron CG44422 - chrX 11270120 intron CG44422 - chrX_11_11265001 chrX_11265001 RAL-409_125b 3102 chrX 11277217 11277272 chrX 11277336 11277397 9 125 2.5 6.5 4.5 1.6 180 chrX 11277217 intron CG44422 - chrX 11277307 intron CG44422 - chrX 11277397 intron CG44422 - chrX_9_11275001 chrX_11275001 RAL-409_125b 3103 chrX 11338455 11338496 chrX 11338601 11338640 9 144 0.0 5.0 2.5 2.6 185 chrX 11338455 intron Kap3 - chrX 11338548 intron Kap3 - chrX 11338640 intron Kap3 - chrX_9_11335001 chrX_11335001 RAL-409_125b 3104 chrX 11513438 11513498 chrX 11513568 11513628 15 129 5.5 9.0 7.2 1.8 190 chrX 11513438 intron Drak + chrX 11513533 intron Drak + chrX 11513628 intron Drak + chrX_15_11510001 chrX_11510001 RAL-409_125b 3105 chrX 11535001 11535044 chrX 11541521 11541564 Burdock 9 6519 8.5 8.0 8.2 1.0 6563 chrX 11535001 intron Drak + chrX 11538282 intron Drak + chrX 11541564 intron Drak + chrX_9_11535001 chrX_11535001 RAL-409_125b 3106 chrX 11602189 11602246 chrX 11602309 11602373 12 126 7.0 7.0 7.0 1.5 184 chrX 11602189 intron rho-4 + chrX 11602281 intron rho-4 + chrX 11602373 intron rho-4 + chrX_12_11600001 chrX_11600001 RAL-409_125b 3107 chrX 11633380 11633426 chrX 11640484 11640530 297 10 7100 6.0 7.0 6.5 1.3 7150 chrX 11633380 intron Ptp10D + chrX 11636955 intron Ptp10D + chrX 11640530 intron Ptp10D + chrX_10_11635001 chrX_11635001 RAL-409_125b 3108 chrX 11645056 11645115 chrX 11648276 11648335 NOF 5 3210 4.5 1.0 2.8 1.3 3279 chrX 11645056 intron Ptp10D + chrX 11646696 intron Ptp10D + chrX 11648335 intron Ptp10D + chrX_5_11645001 chrX_11645001 RAL-409_125b 3109 chrX 11719866 11719888 chrX 11719988 11720018 6 124 8.5 8.5 8.5 0.6 152 chrX 11719866 3` UTR prtp + chrX 11719942 intergenic prtp +,Tango10 + chrX 11720018 intergenic prtp +,Tango10 + chrX_6_11715001 chrX_11715001 RAL-409_125b 3110 chrX 11798974 11799024 chrX 11799110 11799160 7 133 4.5 3.0 3.8 1.5 186 chrX 11798974 intron CkIIbeta + chrX 11799067 intron CkIIbeta + chrX 11799160 intron CkIIbeta + chrX_7_11795001 chrX_11795001 RAL-409_125b 3111 chrX 11880892 11880910 chrX 11881015 11881034 6 128 6.0 2.5 4.2 1.2 142 chrX 11880892 exon CG10353 - chrX 11880963 intron CG10353 - chrX 11881034 intron CG10353 - chrX_6_11880001 chrX_11880001 RAL-409_125b 3112 chrX 11922314 11922373 chrX 11922497 11922556 10 180 2.5 5.0 3.8 2.1 242 chrX 11922314 exon Sclp - chrX 11922435 intron Sclp - chrX 11922556 intron Sclp - chrX_10_11920001 chrX_11920001 RAL-409_125b 3113 chrX 11936572 11936589 chrX 11936698 11936715 4 133 0.5 6.0 3.2 1.0 143 chrX 11936572 intron cac - chrX 11936644 intron cac - chrX 11936715 exon cac - chrX_4_11935001 chrX_11935001 RAL-409_125b 3114 chrX 11999011 11999054 chrX 11999129 11999158 5 119 1.5 3.5 2.5 1.4 147 chrX 11999011 intron fw - chrX 11999084 intron fw - chrX 11999158 intron fw - chrX_5_11995001 chrX_11995001 RAL-409_125b 3115 chrX 12150506 12150577 chrX 12150638 12150700 17 125 2.0 3.5 2.8 4.5 194 chrX 12150506 intron Ten-a + chrX 12150603 intron Ten-a + chrX 12150700 intron Ten-a + chrX_17_12150001 chrX_12150001 RAL-409_125b 3116 chrX 12168100 12168143 chrX 12173592 12173619 I-element 6 5487 4.5 3.5 4.0 1.2 5519 chrX 12168100 intron Ten-a + chrX 12170860 intron Ten-a + chrX 12173619 intron Ten-a + chrX_6_12170001 chrX_12170001 RAL-409_125b 3117 chrX 12176721 12176769 chrX 12176815 12176884 9 118 6.5 6.0 6.2 1.2 163 chrX 12176721 intron,3` UTR Ten-a +,CG1924 - chrX 12176802 intron,3` UTR Ten-a +,CG1924 - chrX 12176884 intron,3` UTR Ten-a +,CG1924 - chrX_9_12175001 chrX_12175001 RAL-409_125b 3118 chrX 12191547 12191568 chrX 12191685 12191701 4 136 6.0 8.0 7.0 0.5 154 chrX 12191547 intron Ten-a + chrX 12191624 intron Ten-a + chrX 12191701 intron Ten-a + chrX_4_12190001 chrX_12190001 RAL-409_125b 3119 chrX 12202728 12202781 chrX 12202857 12202915 7 130 1.5 2.0 1.8 2.5 187 chrX 12202728 intron Ten-a + chrX 12202822 intron Ten-a + chrX 12202915 intron Ten-a + chrX_7_12200001 chrX_12200001 RAL-409_125b 3120 chrX 12295282 12295327 chrX 12295408 12295453 7 125 3.0 3.5 3.2 1.7 171 chrX 12295282 exon Ten-a + chrX 12295368 intron Ten-a + chrX 12295453 intron Ten-a + chrX_7_12295001 chrX_12295001 RAL-409_125b 3121 chrX 12349223 12349259 chrX 12349336 12349380 5 120 4.0 5.5 4.8 0.9 157 chrX 12349223 intergenic not near genes chrX 12349302 intergenic not near genes chrX 12349380 intergenic not near genes chrX_5_12345001 chrX_12345001 RAL-409_125b 3122 chrX 12350733 12350753 chrX 12350858 12350872 4 126 11.0 0.0 5.5 0.6 139 chrX 12350733 intergenic not near genes chrX 12350802 intergenic not near genes chrX 12350872 intergenic not near genes chrX_4_12350001 chrX_12350001 RAL-409_125b 3123 chrX 12350754 12350798 chrX 12350854 12350865 7 100 4.5 0.5 2.5 2.0 111 chrX 12350754 intergenic not near genes chrX 12350810 intergenic not near genes chrX 12350865 intergenic not near genes chrX_7_12350001 chrX_12350001 RAL-409_125b 3124 chrX 12430908 12430958 chrX 12431025 12431083 14 123 2.5 0.0 1.2 6.4 175 chrX 12430908 intergenic not near genes chrX 12430996 intergenic not near genes chrX 12431083 intergenic not near genes chrX_14_12430001 chrX_12430001 RAL-409_125b 3125 chrX 12492949 12492958 chrX 13057292 13057296 4 564342 6.5 18.0 12.2 0.3 564347 chrX 12492949 3` UTR Lsp1alpha + chrX 12775122 3` UTR CG32647 - chrX 13057296 intron rad + chrX_4_12775001 chrX_12775001 RAL-409_125b 3126 chrX 12511275 12511351 chrX 12511407 12511485 8 133 0.0 2.5 1.2 3.6 210 chrX 12511275 intron CG2556 + chrX 12511380 intron CG2556 + chrX 12511485 intron CG2556 + chrX_8_12510001 chrX_12510001 RAL-409_125b 3127 chrX 12528815 12528839 chrX 12528941 12528965 4 126 3.5 0.0 1.8 1.4 150 chrX 12528815 intron CG43921 - chrX 12528890 intron CG43921 - chrX 12528965 intron CG43921 - chrX_4_12525001 chrX_12525001 RAL-409_125b 3128 chrX 12532594 12532671 chrX 12532790 12532842 9 176 6.5 1.5 4.0 1.8 248 chrX 12532594 intron CG43921 - chrX 12532718 intron CG43921 - chrX 12532842 intron CG43921 - chrX_9_12530001 chrX_12530001 RAL-409_125b 3129 chrX 12649915 12649916 chrX 18171791 18171801 4 5521880 20.5 9.0 14.8 0.3 5521886 chrX 12649915 intron Tomosyn + chrX 15410858 exon Cngl - chrX 18171801 3` UTR Frq1 + chrX_4_15410001 chrX_15410001 RAL-409_125b 3130 chrX 12823158 12823216 chrX 12823274 12823332 14 124 3.5 5.5 4.5 2.5 174 chrX 12823158 intron Pde9 - chrX 12823245 intron Pde9 - chrX 12823332 intron Pde9 - chrX_14_12820001 chrX_12820001 RAL-409_125b 3131 chrX 12927293 12927360 chrX 12927419 12927486 7 125 4.0 0.0 2.0 2.3 193 chrX 12927293 intron fne + chrX 12927390 intron fne + chrX 12927486 intron fne + chrX_7_12925001 chrX_12925001 RAL-409_125b 3132 chrX 12930566 12930602 chrX 12937727 12937761 HMS-Beagle 9 7160 2.5 8.0 5.2 1.5 7195 chrX 12930566 intron fne + chrX 12934164 intron fne + chrX 12937761 intron fne + chrX_9_12930001 chrX_12930001 RAL-409_125b 3133 chrX 12953847 12953920 chrX 12954030 12954106 10 186 2.0 1.5 1.8 3.6 259 chrX 12953847 intron hec - chrX 12953976 intron hec - chrX 12954106 intron hec - chrX_10_12950001 chrX_12950001 RAL-409_125b 3134 chrX 12960727 12960786 chrX 12960854 12960917 6 130 2.5 3.5 3.0 1.5 190 chrX 12960727 3` UTR CG32642 + chrX 12960822 intergenic CG32642 + chrX 12960917 intergenic CG32642 + chrX_6_12960001 chrX_12960001 RAL-409_125b 3135 chrX 13072472 13072500 chrX 13072598 13072631 4 126 8.5 11.5 10.0 0.4 159 chrX 13072472 intron rad + chrX 13072552 intron rad + chrX 13072631 intron rad + chrX_4_13070001 chrX_13070001 RAL-409_125b 3136 chrX 13146554 13146617 chrX 13146692 13146755 7 137 4.5 3.0 3.8 1.5 201 chrX 13146554 intron CG32645 + chrX 13146654 intron CG32645 + chrX 13146755 intron CG32645 + chrX_7_13145001 chrX_13145001 RAL-409_125b 3137 chrX 13172328 13172359 chrX 13172444 13172485 4 123 11.5 7.5 9.5 0.4 157 chrX 13172328 exon CG34411 - chrX 13172406 intron CG34411 - chrX 13172485 intron CG34411 - chrX_4_13170001 chrX_13170001 RAL-409_125b 3138 chrX 13236855 13236897 chrX 13236965 13237011 8 118 3.0 4.0 3.5 1.8 156 chrX 13236855 intron mew - chrX 13236933 intron mew - chrX 13237011 intron mew - chrX_8_13235001 chrX_13235001 RAL-409_125b 3139 chrX 13272127 13272179 chrX 13272254 13272306 9 118 7.5 5.0 6.2 1.2 179 chrX 13272127 intron HDAC4 - chrX 13272216 intron HDAC4 - chrX 13272306 intron HDAC4 - chrX_9_13270001 chrX_13270001 RAL-409_125b 3140 chrX 13329267 13329359 chrX 13329416 13329484 7 144 0.0 0.0 0.0 7.0 217 chrX 13329267 3` UTR IP3K2 + chrX 13329376 intergenic IP3K2 +,Jafrac1 + chrX 13329484 intergenic IP3K2 +,Jafrac1 + chrX_7_13325001 chrX_13325001 RAL-409_125b 3141 chrX 13374802 13374815 chrX 13374932 13374945 4 128 9.5 7.5 8.5 0.4 143 chrX 13374802 intron CG1640 + chrX 13374874 intron CG1640 + chrX 13374945 intron CG1640 + chrX_4_13370001 chrX_13370001 RAL-409_125b 3142 chrX 13374821 13374867 chrX 13374931 13374986 9 122 5.5 7.5 6.5 1.2 165 chrX 13374821 intron CG1640 + chrX 13374904 intron CG1640 + chrX 13374986 intron CG1640 + chrX_9_13370001 chrX_13370001 RAL-409_125b 3143 chrX 13401444 13401506 chrX 13401846 13401908 jockey 11 400 5.5 4.5 5.0 1.8 464 chrX 13401444 intergenic CG1673 +,CG12725 - chrX 13401676 intergenic CG12725 -,CG1673 + chrX 13401908 3` UTR CG12725 - chrX_11_13400001 chrX_13400001 RAL-409_125b 3144 chrX 13429410 13429474 chrX 13430609 13430673 jockey 6 1199 0.0 4.0 2.0 2.0 1263 chrX 13429410 intergenic not near genes chrX 13430042 intergenic not near genes chrX 13430673 intergenic not near genes chrX_6_13430001 chrX_13430001 RAL-409_125b 3145 chrX 13442118 13442161 chrX 13442259 13442289 8 137 1.5 5.0 3.2 1.9 171 chrX 13442118 intergenic not near genes chrX 13442204 intergenic not near genes chrX 13442289 intergenic not near genes chrX_8_13440001 chrX_13440001 RAL-409_125b 3146 chrX 13443390 13443414 chrX 13443491 13443541 7 116 8.5 6.5 7.5 0.8 151 chrX 13443390 intergenic not near genes chrX 13443466 intergenic not near genes chrX 13443541 intergenic not near genes chrX_7_13440001 chrX_13440001 RAL-409_125b 3147 chrX 13447255 13447285 chrX 13451676 13451737 13 4435 22.5 19.5 21.0 0.6 4482 chrX 13447255 intron Neto + chrX 13449496 intron Neto + chrX 13451737 intron Neto + chrX_13_13445001 chrX_13445001 RAL-409_125b 3148 chrX 13463602 13463667 chrX 13469229 13469287 mdg3 10 5625 8.0 3.0 5.5 1.5 5685 chrX 13463602 intron Neto + chrX 13466444 intron Neto + chrX 13469287 intron Neto + chrX_10_13465001 chrX_13465001 RAL-409_125b 3149 chrX 13550451 13550467 chrX 13550581 13550599 8 132 3.5 0.0 1.8 2.9 148 chrX 13550451 intergenic not near genes chrX 13550525 intergenic not near genes chrX 13550599 intergenic not near genes chrX_8_13550001 chrX_13550001 RAL-409_125b 3150 chrX 13603823 13603858 chrX 13603959 13603993 6 135 1.5 6.0 3.8 1.2 170 chrX 13603823 intergenic not near genes chrX 13603908 intergenic CR44654 + chrX 13603993 intergenic CR44654 + chrX_6_13600001 chrX_13600001 RAL-409_125b 3151 chrX 13628404 13628455 chrX 13628538 13628589 9 134 5.5 5.0 5.2 1.5 185 chrX 13628404 intron NFAT + chrX 13628496 intron NFAT + chrX 13628589 intron NFAT + chrX_9_13625001 chrX_13625001 RAL-409_125b 3152 chrX 13754421 13754456 chrX 13754527 13754598 7 122 7.0 4.0 5.5 1.1 177 chrX 13754421 intron Pdcd4 - chrX 13754510 intron Pdcd4 - chrX 13754598 intron Pdcd4 - chrX_7_13750001 chrX_13750001 RAL-409_125b 3153 chrX 13815878 13815895 chrX 13816109 13816110 8 226 12.0 7.0 9.5 0.8 232 chrX 13815878 intron Clic - chrX 13815994 intron Clic - chrX 13816110 intron Clic - chrX_8_13815001 chrX_13815001 RAL-409_125b 3154 chrX 13815898 13815942 chrX 13816105 13816138 11 213 5.0 6.5 5.8 1.6 240 chrX 13815898 intron Clic - chrX 13816018 intron Clic - chrX 13816138 intron Clic - chrX_11_13815001 chrX_13815001 RAL-409_125b 3155 chrX 13916678 13916708 chrX 13916800 13916835 5 124 8.0 3.0 5.5 0.8 157 chrX 13916678 intron mamo - chrX 13916756 intron mamo - chrX 13916835 intron mamo - chrX_5_13915001 chrX_13915001 RAL-409_125b 3156 chrX 13934283 13934310 chrX 13934389 13934443 5 128 6.0 5.5 5.8 0.7 160 chrX 13934283 intron mamo - chrX 13934363 intron mamo - chrX 13934443 intron mamo - chrX_5_13930001 chrX_13930001 RAL-409_125b 3157 chrX 13937968 13937988 chrX 13941279 13941279 I-element 5 3310 6.0 7.5 6.8 0.6 3311 chrX 13937968 intron mamo - chrX 13939624 intron mamo - chrX 13941279 intron mamo - chrX_5_13935001 chrX_13935001 RAL-409_125b 3158 chrX 13975826 13975899 chrX 13975954 13976026 10 124 0.5 4.0 2.2 3.1 200 chrX 13975826 intron mamo - chrX 13975926 intron mamo - chrX 13976026 intron mamo - chrX_10_13975001 chrX_13975001 RAL-409_125b 3159 chrX 14104993 14105012 chrX 14114194 14114213 roo 10 9198 7.5 5.0 6.2 1.4 9220 chrX 14104993 intergenic not near genes chrX 14109603 intergenic not near genes chrX 14114213 5` UTR CR44657 + chrX_10_14105001 chrX_14105001 RAL-409_125b 3160 chrX 14105026 14105040 chrX 14114185 14114220 roo 5 9183 5.0 4.5 4.8 0.9 9194 chrX 14105026 intergenic not near genes chrX 14109623 intergenic not near genes chrX 14114220 5` UTR CR44657 + chrX_5_14105001 chrX_14105001 RAL-409_125b 3161 chrX 14131440 14131516 chrX 14131568 14131614 12 114 1.5 5.0 3.2 2.9 174 chrX 14131440 intergenic not near genes chrX 14131527 intergenic not near genes chrX 14131614 intergenic not near genes chrX_12_14130001 chrX_14130001 RAL-409_125b 3162 chrX 14176024 14176087 chrX 14176149 14176217 15 129 5.5 3.5 4.5 2.7 193 chrX 14176024 intergenic CG1368 + chrX 14176120 intergenic CG1368 + chrX 14176217 intergenic not near genes chrX_15_14175001 chrX_14175001 RAL-409_125b 3163 chrX 14209441 14209490 chrX 14209576 14209628 6 139 5.0 8.0 6.5 0.8 187 chrX 14209441 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209534 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209628 intron,intron l(1)G0007 +,l(1)G0469 - chrX_6_14205001 chrX_14205001 RAL-409_125b 3164 chrX 14300500 14300541 chrX 14300628 14300669 7 128 3.0 1.0 2.0 2.3 169 chrX 14300500 intergenic not near genes chrX 14300584 intergenic not near genes chrX 14300669 intergenic not near genes chrX_7_14300001 chrX_14300001 RAL-409_125b 3165 chrX 14333274 14333315 chrX 14333376 14333397 7 93 2.0 6.0 4.0 1.4 123 chrX 14333274 intron dpr8 + chrX 14333336 intron dpr8 + chrX 14333397 intron dpr8 + chrX_7_14330001 chrX_14330001 RAL-409_125b 3166 chrX 14333788 14333846 chrX 14333933 14333994 16 140 3.5 5.0 4.2 3.1 206 chrX 14333788 intron dpr8 + chrX 14333891 intron dpr8 + chrX 14333994 intron dpr8 + chrX_16_14330001 chrX_14330001 RAL-409_125b 3167 chrX 14401517 14401571 chrX 14401666 14401729 13 156 4.5 4.5 4.5 2.4 212 chrX 14401517 intron dpr8 + chrX 14401623 intron dpr8 + chrX 14401729 intron dpr8 + chrX_13_14400001 chrX_14400001 RAL-409_125b 3168 chrX 14404965 14405014 chrX 14405093 14405133 10 126 3.0 0.5 1.8 3.6 168 chrX 14404965 intron dpr8 + chrX 14405049 intron dpr8 + chrX 14405133 intron dpr8 + chrX_10_14405001 chrX_14405001 RAL-409_125b 3169 chrX 14407232 14407275 chrX 14407364 14407407 9 131 1.5 5.5 3.5 2.0 175 chrX 14407232 intron dpr8 + chrX 14407320 intron dpr8 + chrX 14407407 intron dpr8 + chrX_9_14405001 chrX_14405001 RAL-409_125b 3170 chrX 14411215 14411283 chrX 14411343 14411408 13 123 4.0 4.5 4.2 2.5 193 chrX 14411215 intron dpr8 + chrX 14411312 intron dpr8 + chrX 14411408 intron dpr8 + chrX_13_14410001 chrX_14410001 RAL-409_125b 3171 chrX 14416269 14416324 chrX 14421087 14421141 F-element 16 4816 3.0 8.5 5.8 2.4 4872 chrX 14416269 intron dpr8 + chrX 14418705 intron dpr8 + chrX 14421141 intron dpr8 + chrX_16_14415001 chrX_14415001 RAL-409_125b 3172 chrX 14484918 14484995 chrX 14485057 14485134 8 138 0.0 4.0 2.0 2.7 216 chrX 14484918 intergenic not near genes chrX 14485026 intergenic not near genes chrX 14485134 intergenic not near genes chrX_8_14485001 chrX_14485001 RAL-409_125b 3173 chrX 14500463 14500529 chrX 14500614 14500668 6 149 3.5 5.5 4.5 1.1 205 chrX 14500463 intergenic not near genes chrX 14500566 intergenic not near genes chrX 14500668 intergenic not near genes chrX_6_14500001 chrX_14500001 RAL-409_125b 3174 chrX 14528643 14528716 chrX 14528781 14528854 14 141 4.0 7.5 5.8 2.1 211 chrX 14528643 intergenic not near genes chrX 14528748 intergenic not near genes chrX 14528854 intergenic not near genes chrX_14_14525001 chrX_14525001 RAL-409_125b 3175 chrX 14636431 14636439 chrX 14641914 14641930 I-element 4 5485 11.5 6.5 9.0 0.4 5499 chrX 14636431 intron NetA - chrX 14639180 intron NetA - chrX 14641930 intron NetA - chrX_4_14635001 chrX_14635001 RAL-409_125b 3176 chrX 14636441 14636483 chrX 14641912 14641959 I-element 6 5478 8.5 6.5 7.5 0.7 5518 chrX 14636441 intron NetA - chrX 14639200 intron NetA - chrX 14641959 intron NetA - chrX_6_14635001 chrX_14635001 RAL-409_125b 3177 chrX 14671212 14671251 chrX 14671350 14671383 8 135 6.0 3.0 4.5 1.5 171 chrX 14671212 intergenic not near genes chrX 14671298 intergenic not near genes chrX 14671383 intergenic not near genes chrX_8_14670001 chrX_14670001 RAL-409_125b 3178 chrX 14714001 14714063 chrX 14714126 14714184 16 130 4.0 5.0 4.5 2.9 183 chrX 14714001 intron NetB - chrX 14714092 intron NetB - chrX 14714184 intron NetB - chrX_16_14710001 chrX_14710001 RAL-409_125b 3179 chrX 14777993 14778030 chrX 14782840 14782877 Doc 6 4846 7.0 6.5 6.8 0.8 4884 chrX 14777993 intergenic CG5347 + chrX 14780435 intergenic not near genes chrX 14782877 intergenic Ag5r2 - chrX_6_14780001 chrX_14780001 RAL-409_125b 3180 chrX 14796569 14796600 chrX 14796698 14796734 6 133 3.5 2.5 3.0 1.5 165 chrX 14796569 intron rut - chrX 14796652 intron rut - chrX 14796734 intron rut - chrX_6_14795001 chrX_14795001 RAL-409_125b 3181 chrX 14799652 14799698 chrX 14799798 14799844 9 144 10.5 2.5 6.5 1.2 192 chrX 14799652 intron rut - chrX 14799748 intron rut - chrX 14799844 intron rut - chrX_9_14795001 chrX_14795001 RAL-409_125b 3182 chrX 14810159 14810175 chrX 14810287 14810296 5 126 6.0 0.0 3.0 1.2 137 chrX 14810159 intron rut - chrX 14810228 intron rut - chrX 14810296 intron rut - chrX_5_14810001 chrX_14810001 RAL-409_125b 3183 chrX 14818742 14818786 chrX 14823977 14824010 copia 13 5242 4.5 6.5 5.5 2.0 5268 chrX 14818742 intron rut - chrX 14821376 intron rut - chrX 14824010 intron rut - chrX_13_14820001 chrX_14820001 RAL-409_125b 3184 chrX 14861927 14862000 chrX 14862096 14862164 18 167 29.5 37.5 33.5 0.5 237 chrX 14861927 intron Flo2 + chrX 14862046 intron Flo2 + chrX 14862164 intron Flo2 + chrX_18_14860001 chrX_14860001 RAL-409_125b 3185 chrX 14936825 14936881 chrX 14946132 14946181 roo 18 9306 6.5 4.5 5.5 2.8 9356 chrX 14936825 intron pdgy - chrX 14941503 intron pdgy - chrX 14946181 intron pdgy - chrX_18_14940001 chrX_14940001 RAL-409_125b 3186 chrX 14968030 14968098 chrX 14968154 14968227 12 127 1.0 3.0 2.0 4.0 197 chrX 14968030 intron eag + chrX 14968128 intron eag + chrX 14968227 intron eag + chrX_12_14965001 chrX_14965001 RAL-409_125b 3187 chrX 15059125 15059164 chrX 15059281 15059320 4 156 7.0 3.5 5.2 0.6 195 chrX 15059125 exon hiw - chrX 15059222 intron hiw - chrX 15059320 intron hiw - chrX_4_15055001 chrX_15055001 RAL-409_125b 3188 chrX 15200600 15200636 chrX 15200726 15200762 5 124 8.0 2.0 5.0 0.8 162 chrX 15200600 intergenic not near genes chrX 15200681 intergenic not near genes chrX 15200762 intergenic not near genes chrX_5_15200001 chrX_15200001 RAL-409_125b 3189 chrX 15217253 15217305 chrX 15217371 15217406 8 110 4.0 3.0 3.5 1.8 153 chrX 15217253 intergenic not near genes chrX 15217330 intergenic not near genes chrX 15217406 intergenic not near genes chrX_8_15215001 chrX_15215001 RAL-409_125b 3190 chrX 15273697 15273738 chrX 15274882 15274898 1360 11 1192 5.5 5.5 5.5 1.7 1201 chrX 15273697 intergenic not near genes chrX 15274298 intergenic not near genes chrX 15274898 intergenic not near genes chrX_11_15270001 chrX_15270001 RAL-409_125b 3191 chrX 15413009 15413069 chrX 15417361 15417387 Juan 15 4344 5.5 5.5 5.5 2.3 4378 chrX 15413009 intron Cngl - chrX 15415198 intron Cngl - chrX 15417387 intron Cngl - chrX_15_15415001 chrX_15415001 RAL-409_125b 3192 chrX 15565618 15565697 chrX 15565825 15565884 14 202 4.5 7.0 5.8 2.1 266 chrX 15565618 intergenic not near genes chrX 15565751 intergenic not near genes chrX 15565884 intergenic not near genes chrX_14_15565001 chrX_15565001 RAL-409_125b 3193 chrX 15589411 15589447 chrX 15589640 15589673 7 228 7.0 7.0 7.0 0.9 262 chrX 15589411 intron CG9220 - chrX 15589542 intron CG9220 - chrX 15589673 exon CG9220 - chrX_7_15585001 chrX_15585001 RAL-409_125b 3194 chrX 15605327 15605380 chrX 15605479 15605530 13 149 4.5 4.0 4.2 2.5 203 chrX 15605327 exon sog - chrX 15605428 intron sog - chrX 15605530 exon sog - chrX_13_15605001 chrX_15605001 RAL-409_125b 3195 chrX 15671159 15671208 chrX 15671296 15671340 5 134 3.5 2.0 2.8 1.3 181 chrX 15671159 intergenic CG15646 - chrX 15671250 intergenic CG15646 - chrX 15671340 intergenic CG15646 - chrX_5_15670001 chrX_15670001 RAL-409_125b 3196 chrX 15678011 15678066 chrX 15678117 15678188 16 123 6.0 3.5 4.8 2.8 177 chrX 15678011 intergenic CG12708 + chrX 15678100 intergenic CG12708 + chrX 15678188 intergenic CG12708 + chrX_16_15675001 chrX_15675001 RAL-409_125b 3197 chrX 15893176 15893232 chrX 15893373 15893412 11 189 7.0 5.0 6.0 1.6 236 chrX 15893176 intron shi + chrX 15893294 intron shi + chrX 15893412 intron shi + chrX_11_15890001 chrX_15890001 RAL-409_125b 3198 chrX 15959502 15959564 chrX 15959634 15959701 12 134 9.5 6.5 8.0 1.3 199 chrX 15959502 intron mmd - chrX 15959602 intron mmd - chrX 15959701 intron mmd - chrX_12_15955001 chrX_15955001 RAL-409_125b 3199 chrX 15970886 15970913 chrX 15971002 15971033 10 124 3.5 6.0 4.8 1.7 147 chrX 15970886 intron mmd - chrX 15970960 intron mmd - chrX 15971033 intron mmd - chrX_10_15970001 chrX_15970001 RAL-409_125b 3200 chrX 16074114 16074150 chrX 16074475 16074536 7 381 1.5 6.5 4.0 1.4 422 chrX 16074114 intergenic not near genes chrX 16074325 intergenic Tob - chrX 16074536 intergenic Tob - chrX_7_16070001 chrX_16070001 RAL-409_125b 3201 chrX 16100507 16100584 chrX 16100636 16100709 15 127 7.0 2.5 4.8 2.6 202 chrX 16100507 intron,intron CG42353 -,CG42354 - chrX 16100608 intron,intron CG42353 -,CG42354 - chrX 16100709 intron,intron CG42353 -,CG42354 - chrX_15_16100001 chrX_16100001 RAL-409_125b 3202 chrX 16160255 16160272 chrX 16160381 16160398 5 124 7.0 3.5 5.2 0.8 143 chrX 16160255 intergenic not near genes chrX 16160326 intergenic not near genes chrX 16160398 intergenic not near genes chrX_5_16160001 chrX_16160001 RAL-409_125b 3203 chrX 16222741 16222745 chrX 16231140 16231145 roo 4 8400 0.0 4.5 2.2 1.2 8404 chrX 16222741 intergenic not near genes chrX 16226943 intergenic not near genes chrX 16231145 intergenic not near genes chrX_4_16225001 chrX_16225001 RAL-409_125b 3204 chrX 16222746 16222804 chrX 16231136 16231173 roo 16 8395 0.0 3.5 1.8 5.7 8427 chrX 16222746 intergenic not near genes chrX 16226960 intergenic not near genes chrX 16231173 intergenic not near genes chrX_16_16225001 chrX_16225001 RAL-409_125b 3205 chrX 16253831 16253857 chrX 16253968 16253993 4 136 0.5 8.0 4.2 0.8 162 chrX 16253831 intergenic snRNA:U5:14B - chrX 16253912 intergenic snRNA:U5:14B - chrX 16253993 intergenic snRNA:U5:14B - chrX_4_16250001 chrX_16250001 RAL-409_125b 3206 chrX 16295493 16295551 chrX 16295627 16295674 6 128 1.5 0.0 0.8 3.3 181 chrX 16295493 intron CG9911 - chrX 16295584 intron CG9911 - chrX 16295674 intron CG9911 - chrX_6_16295001 chrX_16295001 RAL-409_125b 3207 chrX 16340619 16340688 chrX 16349824 16349895 roo 11 9205 2.5 1.0 1.8 3.9 9276 chrX 16340619 3` UTR Dsp1 + chrX 16345257 intergenic not near genes chrX 16349895 intergenic sl + chrX_11_16345001 chrX_16345001 RAL-409_125b 3208 chrX 16492612 16492650 chrX 16498238 16498274 mdg3 17 5626 9.0 5.5 7.2 2.1 5662 chrX 16492612 intron para - chrX 16495443 intron para - chrX 16498274 exon para - chrX_17_16495001 chrX_16495001 RAL-409_125b 3209 chrX 16529360 16529438 chrX 16529529 16529599 5 166 1.5 6.0 3.8 1.0 239 chrX 16529360 intron para - chrX 16529480 intron para - chrX 16529599 intron para - chrX_5_16525001 chrX_16525001 RAL-409_125b 3210 chrX 16650912 16650961 chrX 16651008 16651090 8 123 3.0 2.5 2.8 2.1 178 chrX 16650912 intergenic CG32573 +,CG42512 + chrX 16651001 intergenic CG32573 +,CG42512 + chrX 16651090 intergenic CG32573 +,CG42512 + chrX_8_16650001 chrX_16650001 RAL-409_125b 3211 chrX 16674712 16674780 chrX 16674870 16674873 11 155 6.0 6.5 6.2 1.5 161 chrX 16674712 intron CG13012 - chrX 16674792 intron CG13012 - chrX 16674873 intron CG13012 - chrX_11_16670001 chrX_16670001 RAL-409_125b 3212 chrX 16689592 16689655 chrX 16689715 16689781 23 121 5.5 6.0 5.8 3.4 189 chrX 16689592 intron Sep4 - chrX 16689686 intron Sep4 - chrX 16689781 intron Sep4 - chrX_23_16685001 chrX_16685001 RAL-409_125b 3213 chrX 16821188 16821253 chrX 16821317 16821383 7 129 2.5 0.0 1.2 3.2 195 chrX 16821188 intron CG4829 + chrX 16821286 intron CG4829 + chrX 16821383 intron CG4829 + chrX_7_16820001 chrX_16820001 RAL-409_125b 3214 chrX 16870032 16870092 chrX 16870164 16870225 7 132 4.5 5.5 5.0 1.2 193 chrX 16870032 intron CG13003 - chrX 16870128 intron CG13003 - chrX 16870225 intron CG13003 - chrX_7_16870001 chrX_16870001 RAL-409_125b 3215 chrX 16935963 16936027 chrX 16936431 16936488 jockey 10 466 3.0 4.0 3.5 2.2 525 chrX 16935963 intron CG4928 + chrX 16936226 intron CG4928 + chrX 16936488 intron CG4928 + chrX_10_16935001 chrX_16935001 RAL-409_125b 3216 chrX 17011665 17011962 chrX 17011858 17012080 22 159 5.5 4.5 5.0 3.7 415 chrX 17011665 intron CG45002 - chrX 17011872 intron CG45002 - chrX 17012080 intron CG45002 - chrX_22_17010001 chrX_17010001 RAL-409_125b 3217 chrX 17011966 17011977 chrX 17012082 17012110 4 120 4.5 12.0 8.2 0.4 144 chrX 17011966 intron CG45002 - chrX 17012038 intron CG45002 - chrX 17012110 intron CG45002 - chrX_4_17010001 chrX_17010001 RAL-409_125b 3218 chrX 17011981 17011992 chrX 17012049 17012121 9 111 3.0 5.5 4.2 1.7 140 chrX 17011981 intron CG45002 - chrX 17012051 intron CG45002 - chrX 17012121 intron CG45002 - chrX_9_17010001 chrX_17010001 RAL-409_125b 3219 chrX 17037926 17037997 chrX 17038070 17038141 10 138 5.0 4.5 4.8 1.7 215 chrX 17037926 intron CG45002 - chrX 17038034 intron CG45002 - chrX 17038141 intron CG45002 - chrX_10_17035001 chrX_17035001 RAL-409_125b 3220 chrX 17195173 17195229 chrX 17200292 17200349 flea 14 5129 7.0 6.0 6.5 1.9 5176 chrX 17195173 3` UTR baz + chrX 17197761 3` UTR baz + chrX 17200349 3` UTR baz + chrX_14_17195001 chrX_17195001 RAL-409_125b 3221 chrX 17205805 17205840 chrX 17205944 17205975 7 139 7.0 7.0 7.0 0.9 170 chrX 17205805 intergenic not near genes chrX 17205890 intergenic not near genes chrX 17205975 intergenic CG32564 + chrX_7_17205001 chrX_17205001 RAL-409_125b 3222 chrX 17211437 17211497 chrX 17212105 17212150 9 661 21.0 23.5 22.2 0.4 713 chrX 17211437 intergenic not near genes chrX 17211794 intergenic not near genes chrX 17212150 intergenic CG18258 + chrX_9_17210001 chrX_17210001 RAL-409_125b 3223 chrX 17229912 17229964 chrX 17230062 17230110 11 150 7.5 2.5 5.0 1.8 198 chrX 17229912 intergenic CG10597 - chrX 17230011 intergenic CG10597 - chrX 17230110 intergenic CG10597 - chrX_11_17230001 chrX_17230001 RAL-409_125b 3224 chrX 17262142 17262184 chrX 17262278 17262310 9 135 6.5 7.0 6.8 1.2 168 chrX 17262142 intron f + chrX 17262226 intron f + chrX 17262310 intron f + chrX_9_17260001 chrX_17260001 RAL-409_125b 3225 chrX 17290024 17290090 chrX 17290150 17290211 17 124 7.0 4.5 5.8 2.5 187 chrX 17290024 intron,intron CG5445 +,Fim - chrX 17290118 intron,intron CG5445 +,Fim - chrX 17290211 intron,intron CG5445 +,Fim - chrX_17_17290001 chrX_17290001 RAL-409_125b 3226 chrX 17352547 17352616 chrX 17352691 17352769 9 149 1.0 4.5 2.8 2.4 222 chrX 17352547 intergenic not near genes chrX 17352658 intergenic not near genes chrX 17352769 intergenic not near genes chrX_9_17350001 chrX_17350001 RAL-409_125b 3227 chrX 17357489 17357507 chrX 17357633 17357651 5 142 6.5 3.0 4.8 0.9 162 chrX 17357489 intergenic not near genes chrX 17357570 intergenic not near genes chrX 17357651 intergenic not near genes chrX_5_17355001 chrX_17355001 RAL-409_125b 3228 chrX 17362448 17362510 chrX 17362584 17362652 12 140 4.5 2.0 3.2 2.9 204 chrX 17362448 intergenic not near genes chrX 17362550 intergenic not near genes chrX 17362652 intergenic not near genes chrX_12_17360001 chrX_17360001 RAL-409_125b 3229 chrX 17443079 17443102 chrX 17443253 17443276 8 173 5.0 4.0 4.5 1.5 197 chrX 17443079 intron CG12994 - chrX 17443178 intron CG12994 - chrX 17443276 intron CG12994 - chrX_8_17440001 chrX_17440001 RAL-409_125b 3230 chrX 17476452 17476489 chrX 17476538 17476587 11 101 7.0 5.5 6.2 1.5 135 chrX 17476452 intron CG43658 - chrX 17476520 intron CG43658 - chrX 17476587 intron CG43658 - chrX_11_17475001 chrX_17475001 RAL-409_125b 3231 chrX 17500330 17500386 chrX 17500630 17500701 10 312 8.5 8.0 8.2 1.1 371 chrX 17500330 intron CG43658 - chrX 17500516 intron CG43658 - chrX 17500701 intron CG43658 - chrX_10_17500001 chrX_17500001 RAL-409_125b 3232 chrX 17545468 17545515 chrX 17545594 17545641 9 117 7.0 11.0 9.0 0.9 173 chrX 17545468 intron CG43658 - chrX 17545554 intron CG43658 - chrX 17545641 intron CG43658 - chrX_9_17545001 chrX_17545001 RAL-409_125b 3233 chrX 17546934 17546994 chrX 17547117 17547177 7 181 1.0 5.5 3.2 1.7 243 chrX 17546934 intron CG43658 - chrX 17547056 intron CG43658 - chrX 17547177 intron CG43658 - chrX_7_17545001 chrX_17545001 RAL-409_125b 3234 chrX 17708788 17708859 chrX 17708915 17708990 7 134 2.5 1.0 1.8 2.5 202 chrX 17708788 intron CG8173 - chrX 17708889 intron CG8173 - chrX 17708990 intron CG8173 - chrX_7_17705001 chrX_17705001 RAL-409_125b 3235 chrX 17725220 17725280 chrX 17725352 17725402 16 127 6.0 2.5 4.2 3.1 182 chrX 17725220 intron CG42684 + chrX 17725311 intron CG42684 + chrX 17725402 intron CG42684 + chrX_16_17725001 chrX_17725001 RAL-409_125b 3236 chrX 17741293 17741324 chrX 17741489 17741520 13 195 4.5 4.0 4.2 2.5 227 chrX 17741293 intron CG42684 + chrX 17741406 intron CG42684 + chrX 17741520 intron CG42684 + chrX_13_17740001 chrX_17740001 RAL-409_125b 3237 chrX 17743765 17743809 chrX 17743955 17743977 9 181 5.5 7.0 6.2 1.2 212 chrX 17743765 intron CG42684 + chrX 17743871 intron CG42684 + chrX 17743977 intron CG42684 + chrX_9_17740001 chrX_17740001 RAL-409_125b 3238 chrX 17766334 17766378 chrX 17766458 17766526 8 140 3.0 5.5 4.2 1.5 192 chrX 17766334 intergenic not near genes chrX 17766430 intergenic not near genes chrX 17766526 intergenic not near genes chrX_8_17765001 chrX_17765001 RAL-409_125b 3239 chrX 17782172 17782238 chrX 17782319 17782386 12 145 3.5 3.5 3.5 2.7 214 chrX 17782172 intergenic not near genes chrX 17782279 intergenic not near genes chrX 17782386 intergenic not near genes chrX_12_17780001 chrX_17780001 RAL-409_125b 3240 chrX 17782563 17782591 chrX 17782656 17782720 6 115 5.0 5.0 5.0 1.0 157 chrX 17782563 intergenic not near genes chrX 17782642 intergenic not near genes chrX 17782720 intergenic not near genes chrX_6_17780001 chrX_17780001 RAL-409_125b 3241 chrX 17784431 17784486 chrX 17784557 17784612 7 123 0.5 4.0 2.2 2.2 181 chrX 17784431 intergenic not near genes chrX 17784522 intergenic not near genes chrX 17784612 intergenic not near genes chrX_7_17780001 chrX_17780001 RAL-409_125b 3242 chrX 17792936 17792968 chrX 17796273 17796274 flea 4 3332 4.5 3.0 3.8 0.8 3338 chrX 17792936 intron OdsH + chrX 17794605 intron OdsH + chrX 17796274 intron OdsH + chrX_4_17790001 chrX_17790001 RAL-409_125b 3243 chrX 17953909 17953951 chrX 17954054 17954089 6 137 5.5 11.5 8.5 0.6 180 chrX 17953909 intron Sh - chrX 17953999 intron Sh - chrX 17954089 intron Sh - chrX_6_17950001 chrX_17950001 RAL-409_125b 3244 chrX 17968853 17968861 chrX 17969022 17969030 4 169 6.0 4.5 5.2 0.6 177 chrX 17968853 intron Sh - chrX 17968942 intron Sh - chrX 17969030 intron Sh - chrX_4_17965001 chrX_17965001 RAL-409_125b 3245 chrX 17968863 17968916 chrX 17969021 17969084 16 167 2.0 4.0 3.0 4.0 221 chrX 17968863 intron Sh - chrX 17968974 intron Sh - chrX 17969084 intron Sh - chrX_16_17965001 chrX_17965001 RAL-409_125b 3246 chrX 17972161 17972231 chrX 17972577 17972647 11 408 5.0 5.0 5.0 1.8 486 chrX 17972161 intron Sh - chrX 17972404 intron Sh - chrX 17972647 intron Sh - chrX_11_17970001 chrX_17970001 RAL-409_125b 3247 chrX 17994850 17994900 chrX 17994972 17995017 7 113 3.5 4.5 4.0 1.4 167 chrX 17994850 intron Sh - chrX 17994934 intron Sh - chrX 17995017 intron Sh - chrX_7_17990001 chrX_17990001 RAL-409_125b 3248 chrX 18122785 18122840 chrX 18122906 18122966 10 124 6.0 6.5 6.2 1.4 181 chrX 18122785 5` UTR CR45606 + chrX 18122876 5` UTR CR45606 + chrX 18122966 intergenic CR45606 + chrX_10_18120001 chrX_18120001 RAL-409_125b 3249 chrX 18127893 18127957 chrX 18128028 18128061 7 125 1.5 3.5 2.5 2.0 168 chrX 18127893 intergenic mir-210 + chrX 18127977 intergenic mir-210 + chrX 18128061 intergenic mir-210 + chrX_7_18125001 chrX_18125001 RAL-409_125b 3250 chrX 18194038 18194090 chrX 18194612 18194664 BS 13 581 5.0 5.5 5.2 2.1 626 chrX 18194038 intron Frq2 + chrX 18194351 intron Frq2 + chrX 18194664 intron Frq2 + chrX_13_18190001 chrX_18190001 RAL-409_125b 3251 chrX 18218724 18218778 chrX 18218864 18218923 8 142 4.0 5.5 4.8 1.4 199 chrX 18218724 intron CG33639 - chrX 18218824 intron CG33639 - chrX 18218923 intron CG33639 - chrX_8_18215001 chrX_18215001 RAL-409_125b 3252 chrX 18250384 18250448 chrX 18250538 18250577 14 147 5.5 4.5 5.0 2.3 193 chrX 18250384 intergenic not near genes chrX 18250480 intergenic not near genes chrX 18250577 intergenic not near genes chrX_14_18250001 chrX_18250001 RAL-409_125b 3253 chrX 18320440 18320501 chrX 18320634 18320683 4 191 0.0 5.5 2.8 1.1 243 chrX 18320440 intron CG6023 - chrX 18320562 intron CG6023 - chrX 18320683 intron CG6023 - chrX_4_18320001 chrX_18320001 RAL-409_125b 3254 chrX 18427332 18427353 chrX 18427793 18427808 7 459 5.5 4.5 5.0 1.2 476 chrX 18427332 intergenic CG42323 + chrX 18427570 intergenic not near genes chrX 18427808 intergenic not near genes chrX_7_18425001 chrX_18425001 RAL-409_125b 3255 chrX 18427361 18427407 chrX 18427812 18427868 9 459 1.5 5.5 3.5 2.0 507 chrX 18427361 intergenic CG42323 + chrX 18427614 intergenic not near genes chrX 18427868 intergenic not near genes chrX_9_18425001 chrX_18425001 RAL-409_125b 3256 chrX 18429457 18429517 chrX 18434818 18434878 Transpac 15 5357 4.0 7.0 5.5 2.3 5421 chrX 18429457 intergenic not near genes chrX 18432168 intergenic not near genes chrX 18434878 intergenic not near genes chrX_15_18430001 chrX_18430001 RAL-409_125b 3257 chrX 18440776 18440849 chrX 18440918 18440986 17 140 5.0 4.0 4.5 3.1 210 chrX 18440776 intergenic CG32548 - chrX 18440881 intergenic CG32548 - chrX 18440986 intergenic CG32548 - chrX_17_18440001 chrX_18440001 RAL-409_125b 3258 chrX 18474017 18474044 chrX 18474153 18474181 4 136 5.0 5.0 5.0 0.7 164 chrX 18474017 intron CG32547 - chrX 18474099 intron CG32547 - chrX 18474181 intron CG32547 - chrX_4_18470001 chrX_18470001 RAL-409_125b 3259 chrX 18490001 18490055 chrX 18490202 18490214 11 196 2.0 4.0 3.0 2.8 213 chrX 18490001 intergenic CG15046 - chrX 18490108 intergenic CG15046 - chrX 18490214 intergenic not near genes chrX_11_18490001 chrX_18490001 RAL-409_125b 3260 chrX 18529353 18529389 chrX 18529479 18529515 13 125 5.5 8.0 6.8 1.7 162 chrX 18529353 intron,3` UTR Bx +,CG15047 + chrX 18529434 intron,3` UTR Bx +,CG15047 + chrX 18529515 intron,3` UTR Bx +,CG15047 + chrX_13_18525001 chrX_18525001 RAL-409_125b 3261 chrX 18558730 18558789 chrX 18558862 18558921 10 130 2.5 2.5 2.5 2.9 191 chrX 18558730 intron Bx + chrX 18558826 intron Bx + chrX 18558921 intron Bx + chrX_10_18555001 chrX_18555001 RAL-409_125b 3262 chrX 18644997 18645035 chrX 18645123 18645174 9 142 4.5 4.5 4.5 1.6 177 chrX 18644997 intron Rip11 - chrX 18645086 intron Rip11 - chrX 18645174 intron Rip11 - chrX_9_18645001 chrX_18645001 RAL-409_125b 3263 chrX 18698799 18698877 chrX 18698966 18699044 14 162 1.5 4.5 3.0 3.5 245 chrX 18698799 intergenic not near genes chrX 18698922 intergenic not near genes chrX 18699044 intergenic not near genes chrX_14_18695001 chrX_18695001 RAL-409_125b 3264 chrX 18754290 18754338 chrX 18758002 18758049 297 4 3711 3.0 4.0 3.5 0.9 3759 chrX 18754290 intergenic not near genes chrX 18756170 intergenic not near genes chrX 18758049 intergenic not near genes chrX_4_18755001 chrX_18755001 RAL-409_125b 3265 chrX 18888610 18888680 chrX 18888742 18888810 10 131 4.0 8.5 6.2 1.4 200 chrX 18888610 3` UTR CG7332 + chrX 18888710 3` UTR CG7332 + chrX 18888810 3` UTR CG7332 + chrX_10_18885001 chrX_18885001 RAL-409_125b 3266 chrX 18896471 18896522 chrX 18896632 18896679 5 159 2.0 3.5 2.8 1.3 208 chrX 18896471 3` UTR CG7349 + chrX 18896575 3` UTR CG7349 + chrX 18896679 intergenic CG7349 + chrX_5_18895001 chrX_18895001 RAL-409_125b 3267 chrX 18946144 18946165 chrX 18946281 18946301 7 136 3.0 6.0 4.5 1.3 157 chrX 18946144 intron CG43759 + chrX 18946222 intron CG43759 + chrX 18946301 intron CG43759 + chrX_7_18945001 chrX_18945001 RAL-409_125b 3268 chrX 18947459 18947534 chrX 18947602 18947665 15 139 7.5 10.0 8.8 1.5 206 chrX 18947459 intron CG43759 + chrX 18947562 intron CG43759 + chrX 18947665 intron CG43759 + chrX_15_18945001 chrX_18945001 RAL-409_125b 3269 chrX 18995661 18995722 chrX 18995777 18995803 15 109 7.0 6.0 6.5 2.0 142 chrX 18995661 intron CG43759 + chrX 18995732 intron CG43759 + chrX 18995803 intron CG43759 + chrX_15_18995001 chrX_18995001 RAL-409_125b 3270 chrX 19014362 19014379 chrX 19014448 19014508 9 120 4.5 5.0 4.8 1.6 146 chrX 19014362 intron CG43759 + chrX 19014435 intron CG43759 + chrX 19014508 intron CG43759 + chrX_9_19010001 chrX_19010001 RAL-409_125b 3271 chrX 19019927 19019969 chrX 19020092 19020146 6 167 2.0 4.0 3.0 1.5 219 chrX 19019927 intron CG43759 + chrX 19020036 intron CG43759 + chrX 19020146 intron CG43759 + chrX_6_19020001 chrX_19020001 RAL-409_125b 3272 chrX 19060373 19060429 chrX 19065197 19065262 Doc 9 4831 6.0 7.5 6.8 1.2 4889 chrX 19060373 intron CG14190 + chrX 19062818 intron CG14190 + chrX 19065262 intron CG14190 + chrX_9_19060001 chrX_19060001 RAL-409_125b 3273 chrX 19073651 19073688 chrX 19073778 19073815 5 133 7.0 3.0 5.0 0.8 164 chrX 19073651 intergenic not near genes chrX 19073733 intergenic not near genes chrX 19073815 intergenic not near genes chrX_5_19070001 chrX_19070001 RAL-409_125b 3274 chrX 19080283 19080337 chrX 19080439 19080489 9 154 5.5 3.5 4.5 1.6 206 chrX 19080283 intergenic not near genes chrX 19080386 intergenic not near genes chrX 19080489 intergenic not near genes chrX_9_19080001 chrX_19080001 RAL-409_125b 3275 chrX 19098721 19098781 chrX 19098849 19098909 12 126 0.0 5.0 2.5 3.4 188 chrX 19098721 intergenic not near genes chrX 19098815 intergenic not near genes chrX 19098909 intergenic not near genes chrX_12_19095001 chrX_19095001 RAL-409_125b 3276 chrX 19124416 19124461 chrX 19124554 19124600 8 139 2.0 4.0 3.0 2.0 184 chrX 19124416 intergenic CG15882 - chrX 19124508 intergenic CG15882 -,tgy - chrX 19124600 intergenic CG15882 -,tgy - chrX_8_19120001 chrX_19120001 RAL-409_125b 3277 chrX 19125658 19125664 chrX 19125821 19125827 5 171 11.5 5.5 8.5 0.5 169 chrX 19125658 intron tgy - chrX 19125742 intron tgy - chrX 19125827 intron tgy - chrX_5_19125001 chrX_19125001 RAL-409_125b 3278 chrX 19125670 19125719 chrX 19125804 19125883 10 165 5.0 3.5 4.2 1.9 213 chrX 19125670 intron tgy - chrX 19125776 intron tgy - chrX 19125883 intron tgy - chrX_10_19125001 chrX_19125001 RAL-409_125b 3279 chrX 19136508 19136582 chrX 19143478 19143536 412 8 6958 4.0 0.0 2.0 2.7 7028 chrX 19136508 intergenic not near genes chrX 19140022 intergenic not near genes chrX 19143536 3` UTR RhoGAP18B - chrX_8_19140001 chrX_19140001 RAL-409_125b 3280 chrX 19156606 19156646 chrX 19156819 19156859 6 213 6.0 7.0 6.5 0.8 253 chrX 19156606 intron RhoGAP18B - chrX 19156732 intron RhoGAP18B - chrX 19156859 intron RhoGAP18B - chrX_6_19155001 chrX_19155001 RAL-409_125b 3281 chrX 19170554 19170582 chrX 19170681 19170698 5 123 11.5 10.5 11.0 0.4 144 chrX 19170554 5` UTR Inx5 - chrX 19170626 5` UTR Inx5 - chrX 19170698 5` UTR Inx5 - chrX_5_19170001 chrX_19170001 RAL-409_125b 3282 chrX 19170587 19170599 chrX 19170679 19170716 4 98 10.5 10.0 10.2 0.4 129 chrX 19170587 5` UTR Inx5 - chrX 19170652 5` UTR Inx5 - chrX 19170716 5` UTR Inx5 - chrX_4_19170001 chrX_19170001 RAL-409_125b 3283 chrX 19181986 19182040 chrX 19182142 19182197 6 159 2.5 3.0 2.8 1.6 211 chrX 19181986 3` UTR CG7453 + chrX 19182092 intergenic CG7453 + chrX 19182197 intergenic CG7453 + chrX_6_19180001 chrX_19180001 RAL-409_125b 3284 chrX 19185494 19185562 chrX 19185640 19185708 6 144 1.0 6.0 3.5 1.3 214 chrX 19185494 intron CG33253 + chrX 19185601 intron CG33253 + chrX 19185708 exon CG33253 + chrX_6_19185001 chrX_19185001 RAL-409_125b 3285 chrX 19187470 19187510 chrX 19187602 19187626 6 122 6.5 2.0 4.2 1.2 156 chrX 19187470 intergenic CG33253 + chrX 19187548 intergenic CG33253 +,Mec2 + chrX 19187626 intergenic CG33253 +,Mec2 + chrX_6_19185001 chrX_19185001 RAL-409_125b 3286 chrX 19339738 19339759 chrX 19339864 19339875 5 122 0.0 1.5 0.8 2.8 137 chrX 19339738 intron nAChRalpha7 - chrX 19339806 intron nAChRalpha7 - chrX 19339875 intron nAChRalpha7 - chrX_5_19335001 chrX_19335001 RAL-409_125b 3287 chrX 19356959 19357018 chrX 19358440 19358527 NOF 7 1504 3.5 0.0 1.8 2.5 1568 chrX 19356959 intron kek5 + chrX 19357743 intron kek5 + chrX 19358527 intron kek5 + chrX_7_19355001 chrX_19355001 RAL-409_125b 3288 chrX 19380115 19380182 chrX 19380406 19380468 pogo 17 288 6.5 6.0 6.2 2.4 353 chrX 19380115 intron kek5 + chrX 19380292 intron kek5 + chrX 19380468 intron kek5 + chrX_17_19380001 chrX_19380001 RAL-409_125b 3289 chrX 19430514 19430564 chrX 19430662 19430707 5 147 3.5 7.0 5.2 0.8 193 chrX 19430514 intron kek5 + chrX 19430610 intron kek5 + chrX 19430707 intron kek5 + chrX_5_19430001 chrX_19430001 RAL-409_125b 3290 chrX 19461099 19461166 chrX 19461245 19461312 12 143 7.5 7.0 7.2 1.5 213 chrX 19461099 intron kek5 + chrX 19461206 intron kek5 + chrX 19461312 intron kek5 + chrX_12_19460001 chrX_19460001 RAL-409_125b 3291 chrX 19472087 19472155 chrX 19472707 19472744 jockey 7 606 2.5 5.0 3.8 1.5 657 chrX 19472087 intergenic kek5 + chrX 19472416 intergenic not near genes chrX 19472744 intergenic not near genes chrX_7_19470001 chrX_19470001 RAL-409_125b 3292 chrX 19542092 19542141 chrX 19542235 19542289 11 146 6.5 4.0 5.2 1.8 197 chrX 19542092 intron CG32532 - chrX 19542190 intron CG32532 - chrX 19542289 intron CG32532 - chrX_11_19540001 chrX_19540001 RAL-409_125b 3293 chrX 19762541 19762575 chrX 19762671 19762699 8 128 8.5 2.5 5.5 1.2 158 chrX 19762541 5` UTR CG12702 - chrX 19762620 5` UTR CG12702 - chrX 19762699 5` UTR CG12702 - chrX_8_19760001 chrX_19760001 RAL-409_125b 3294 chrX 19793892 19793920 chrX 19794011 19794035 5 120 8.0 6.5 7.2 0.6 143 chrX 19793892 intergenic not near genes chrX 19793964 intergenic not near genes chrX 19794035 intergenic not near genes chrX_5_19790001 chrX_19790001 RAL-409_125b 3295 chrX 19797305 19797319 chrX 19804671 19804681 Stalker4 5 7366 9.0 4.0 6.5 0.7 7376 chrX 19797305 intergenic not near genes chrX 19800993 intergenic not near genes chrX 19804681 intergenic not near genes chrX_5_19800001 chrX_19800001 RAL-409_125b 3296 chrX 19805790 19805818 chrX 19805893 19805951 6 126 6.0 4.0 5.0 1.0 161 chrX 19805790 intergenic not near genes chrX 19805870 intergenic not near genes chrX 19805951 intergenic not near genes chrX_6_19805001 chrX_19805001 RAL-409_125b 3297 chrX 19881424 19881478 chrX 19881547 19881609 12 126 5.0 3.0 4.0 2.4 185 chrX 19881424 intron Hers + chrX 19881516 intron Hers + chrX 19881609 intron Hers + chrX_12_19880001 chrX_19880001 RAL-409_125b 3298 chrX 19883726 19883795 chrX 19883856 19883899 14 122 6.5 3.0 4.8 2.4 173 chrX 19883726 intron Hers + chrX 19883812 intron Hers + chrX 19883899 intron Hers + chrX_14_19880001 chrX_19880001 RAL-409_125b 3299 chrX 19897351 19897408 chrX 19897473 19897534 12 126 5.0 2.0 3.5 2.7 183 chrX 19897351 intron Hers + chrX 19897442 intron Hers + chrX 19897534 intron Hers + chrX_12_19895001 chrX_19895001 RAL-409_125b 3300 chrX 19971789 19971818 chrX 19971910 19971945 6 124 3.0 9.5 6.2 0.8 156 chrX 19971789 intergenic not near genes chrX 19971867 intergenic not near genes chrX 19971945 intergenic not near genes chrX_6_19970001 chrX_19970001 RAL-409_125b 3301 chrX 19978120 19978145 chrX 19978258 19978272 5 136 6.5 9.0 7.8 0.6 152 chrX 19978120 intergenic not near genes chrX 19978196 intergenic not near genes chrX 19978272 intergenic not near genes chrX_5_19975001 chrX_19975001 RAL-409_125b 3302 chrX 19978146 19978171 chrX 19978249 19978289 6 118 6.5 8.0 7.2 0.7 143 chrX 19978146 intergenic not near genes chrX 19978218 intergenic not near genes chrX 19978289 intergenic not near genes chrX_6_19975001 chrX_19975001 RAL-409_125b 3303 chrX 19983382 19983396 chrX 19983517 19983522 5 133 3.0 0.0 1.5 2.0 140 chrX 19983382 intergenic not near genes chrX 19983452 intergenic not near genes chrX 19983522 intergenic not near genes chrX_5_19980001 chrX_19980001 RAL-409_125b 3304 chrX 19992381 19992421 chrX 19992500 19992530 5 117 8.5 6.0 7.2 0.6 149 chrX 19992381 intergenic not near genes chrX 19992456 intergenic not near genes chrX 19992530 intergenic not near genes chrX_5_19990001 chrX_19990001 RAL-409_125b 3305 chrX 19993427 19993443 chrX 19993556 19993567 4 128 6.5 7.0 6.8 0.5 140 chrX 19993427 intergenic not near genes chrX 19993497 intergenic not near genes chrX 19993567 intergenic not near genes chrX_4_19990001 chrX_19990001 RAL-409_125b 3306 chrX 20082724 20082775 chrX 20082840 20082907 6 120 4.5 2.5 3.5 1.3 183 chrX 20082724 intergenic not near genes chrX 20082816 intergenic not near genes chrX 20082907 intergenic not near genes chrX_6_20080001 chrX_20080001 RAL-409_125b 3307 chrX 20263382 20263440 chrX 20263522 20263577 8 132 3.5 4.0 3.8 1.7 195 chrX 20263382 intergenic not near genes chrX 20263480 intergenic not near genes chrX 20263577 intergenic not near genes chrX_8_20260001 chrX_20260001 RAL-409_125b 3308 chrX 20271453 20271528 chrX 20271594 20271672 7 143 5.5 0.0 2.8 1.8 219 chrX 20271453 intergenic not near genes chrX 20271562 intergenic not near genes chrX 20271672 intergenic not near genes chrX_7_20270001 chrX_20270001 RAL-409_125b 3309 chrX 20320263 20320303 chrX 20320385 20320430 6 124 3.0 0.5 1.8 2.1 167 chrX 20320263 intron CG1504 - chrX 20320346 intron CG1504 - chrX 20320430 intron CG1504 - chrX_6_20320001 chrX_20320001 RAL-409_125b 3310 chrX 20377273 20377341 chrX 20378790 20378833 hobo 7 1509 4.5 8.0 6.2 1.0 1560 chrX 20377273 intergenic not near genes chrX 20378053 intergenic not near genes chrX 20378833 intergenic not near genes chrX_7_20375001 chrX_20375001 RAL-409_125b 3311 chrX 20415041 20415083 chrX 20415172 20415223 5 137 0.0 0.0 0.0 5.0 182 chrX 20415041 intergenic not near genes chrX 20415132 intergenic not near genes chrX 20415223 intergenic not near genes chrX_5_20415001 chrX_20415001 RAL-409_125b 3312 chrX 20427099 20427134 chrX 20427276 20427311 7 176 55.5 48.0 51.8 0.1 212 chrX 20427099 intergenic CG15456 -,CG11710 - chrX 20427205 intergenic CG15456 -,CG11710 - chrX 20427311 intergenic CG11710 -,CG15456 - chrX_7_20425001 chrX_20425001 RAL-409_125b 3313 chrX 20426181 20426220 chrX 20428345 20428405 25 2171 56.5 54.5 55.5 0.4 2224 chrX 20426181 exon cactin + chrX 20427293 intergenic CG11710 -,CG15456 - chrX 20428405 exon CG11710 - chrX_25_20425001 chrX_20425001 RAL-409_125b 3314 chrX 20443162 20443201 chrX 20443283 20443327 6 124 2.5 3.5 3.0 1.5 165 chrX 20443162 exon CG1695 + chrX 20443244 intron CG1695 + chrX 20443327 intron CG1695 + chrX_6_20440001 chrX_20440001 RAL-409_125b 3315 chrX 20467976 20468035 chrX 20468115 20468160 10 135 1.5 0.0 0.8 5.6 184 chrX 20467976 intron GstT3 + chrX 20468068 intron GstT3 + chrX 20468160 intron GstT3 + chrX_10_20465001 chrX_20465001 RAL-409_125b 3316 chrX 20504097 20504152 chrX 20505668 20505707 transib2 14 1564 5.5 4.5 5.0 2.3 1610 chrX 20504097 intron RhoGAP19D - chrX 20504902 intron RhoGAP19D - chrX 20505707 intron RhoGAP19D - chrX_14_20500001 chrX_20500001 RAL-409_125b 3317 chrX 20526319 20526455 chrX 20526533 20526621 7 180 4.5 0.0 2.2 2.2 302 chrX 20526319 intergenic not near genes chrX 20526470 intergenic not near genes chrX 20526621 intergenic not near genes chrX_7_20525001 chrX_20525001 RAL-409_125b 3318 chrX 20531647 20531686 chrX 20531787 20531826 10 140 2.0 5.5 3.8 2.1 179 chrX 20531647 intergenic not near genes chrX 20531736 intergenic not near genes chrX 20531826 intergenic not near genes chrX_10_20530001 chrX_20530001 RAL-409_125b 3319 chrX 20704161 20704184 chrX 20704473 20704495 6 308 0.5 2.5 1.5 2.4 334 chrX 20704161 intergenic not near genes chrX 20704328 intergenic not near genes chrX 20704495 intergenic not near genes chrX_6_20700001 chrX_20700001 RAL-409_125b 3320 chrX 20708365 20708387 chrX 20708481 20708484 4 112 6.5 5.0 5.8 0.6 119 chrX 20708365 intergenic not near genes chrX 20708424 intergenic not near genes chrX 20708484 intergenic not near genes chrX_4_20705001 chrX_20705001 RAL-409_125b 3321 chrX 20783965 20784025 chrX 20784120 20784169 11 153 4.5 3.0 3.8 2.3 204 chrX 20783965 intron shakB - chrX 20784067 intron shakB - chrX 20784169 intron shakB - chrX_11_20780001 chrX_20780001 RAL-409_125b 3322 chrX 20836688 20836749 chrX 20844335 20844401 roo 14 7650 2.0 4.5 3.2 3.3 7713 chrX 20836688 intron shakB - chrX 20840544 intron shakB - chrX 20844401 intron shakB - chrX_14_20840001 chrX_20840001 RAL-409_125b 3323 chrX 20940686 20940727 chrX 20942202 20942229 hobo 11 1515 6.5 3.5 5.0 1.8 1543 chrX 20940686 intergenic not near genes chrX 20941458 intergenic not near genes chrX 20942229 intergenic not near genes chrX_11_20940001 chrX_20940001 RAL-409_125b 3324 chrX 20948285 20948354 chrX 20948412 20948426 4 109 0.5 1.0 0.8 2.2 141 chrX 20948285 intergenic not near genes chrX 20948356 intergenic not near genes chrX 20948426 intergenic not near genes chrX_4_20945001 chrX_20945001 RAL-409_125b 3325 chrX 20980983 20981054 chrX 20981136 20981207 12 146 5.0 6.0 5.5 1.8 224 chrX 20980983 intergenic not near genes chrX 20981095 intergenic not near genes chrX 20981207 intergenic not near genes chrX_12_20980001 chrX_20980001 RAL-409_125b 3326 chrX 21013796 21013857 chrX 21014229 21014290 10 432 4.5 4.0 4.2 1.9 494 chrX 21013796 intergenic not near genes chrX 21014043 intergenic not near genes chrX 21014290 intergenic not near genes chrX_10_21010001 chrX_21010001 RAL-409_125b 3327 chrX 21029099 21029164 chrX 21029366 21029429 6 265 2.5 2.5 2.5 1.7 330 chrX 21029099 3` UTR CG1529 - chrX 21029264 3` UTR CG1529 - chrX 21029429 3` UTR CG1529 - chrX_6_21025001 chrX_21025001 RAL-409_125b 3328 chrX 21061828 21061889 chrX 21062352 21062414 roo 8 531 5.0 5.5 5.2 1.3 586 chrX 21061828 intron bves + chrX 21062121 intron bves + chrX 21062414 intron,3` UTR bves +,CG32512 - chrX_8_21060001 chrX_21060001 RAL-409_125b 3329 chrX 21076283 21076333 chrX 21076412 21076462 6 127 6.5 5.0 5.8 0.9 179 chrX 21076283 intron bves + chrX 21076372 intron bves + chrX 21076462 intron bves + chrX_6_21075001 chrX_21075001 RAL-409_125b 3330 chrX 21077545 21077617 chrX 21077684 21077756 6 134 5.5 6.0 5.8 0.9 211 chrX 21077545 intron bves + chrX 21077650 intron bves + chrX 21077756 intron bves + chrX_6_21075001 chrX_21075001 RAL-409_125b 3331 chrX 21078767 21078777 chrX 21078875 21078905 4 120 5.0 0.0 2.5 1.1 138 chrX 21078767 intron bves + chrX 21078836 intron bves + chrX 21078905 intron bves + chrX_4_21075001 chrX_21075001 RAL-409_125b 3332 chrX 21086089 21086153 chrX 21087168 21087232 jockey 13 1076 6.0 8.5 7.2 1.6 1143 chrX 21086089 intergenic not near genes chrX 21086660 intergenic not near genes chrX 21087232 intergenic not near genes chrX_13_21085001 chrX_21085001 RAL-409_125b 3333 chrX 21178407 21178427 chrX 21178492 21178514 4 92 3.5 3.0 3.2 1.0 107 chrX 21178407 intergenic not near genes chrX 21178460 intergenic not near genes chrX 21178514 intergenic not near genes chrX_4_21175001 chrX_21175001 RAL-409_125b 3334 chrX 21190795 21190823 chrX 21190905 21190945 5 125 0.0 3.5 1.8 1.8 150 chrX 21190795 intergenic not near genes chrX 21190870 intergenic not near genes chrX 21190945 intergenic not near genes chrX_5_21190001 chrX_21190001 RAL-409_125b 3335 chrX 21328069 21328148 chrX 21328230 21328299 16 159 3.0 4.0 3.5 3.6 230 chrX 21328069 3` UTR CG1486 + chrX 21328184 intergenic CG1486 +,tty - chrX 21328299 intergenic CG1486 +,tty - chrX_16_21325001 chrX_21325001 RAL-409_125b 3336 chrX 21454831 21454872 chrX 21454965 21455001 6 131 4.0 6.5 5.2 1.0 170 chrX 21454831 intron CG42343 - chrX 21454916 intron CG42343 - chrX 21455001 intron CG42343 - chrX_6_21450001 chrX_21450001 RAL-409_125b 3337 chrX 21455172 21455242 chrX 21455396 21455449 7 230 2.5 0.5 1.5 2.8 277 chrX 21455172 intron CG42343 - chrX 21455310 intron CG42343 - chrX 21455449 intron CG42343 - chrX_7_21455001 chrX_21455001 RAL-409_125b 3338 chrX 21458640 21458708 chrX 21464126 21464194 Ivk 10 5486 4.5 2.0 3.2 2.4 5554 chrX 21458640 intergenic not near genes chrX 21461417 intergenic not near genes chrX 21464194 intergenic not near genes chrX_10_21460001 chrX_21460001 RAL-409_125b 3339 chrX 21516955 21517006 chrX 21517084 21517114 5 119 8.0 8.5 8.2 0.5 159 chrX 21516955 intron CR45082 - chrX 21517034 intron CR45082 - chrX 21517114 intron CR45082 - chrX_5_21515001 chrX_21515001 RAL-409_125b 3340 chrX 21565415 21565422 chrX 21565528 21565550 4 124 6.0 8.5 7.2 0.5 135 chrX 21565415 intergenic not near genes chrX 21565482 intergenic not near genes chrX 21565550 intergenic not near genes chrX_4_21565001 chrX_21565001 RAL-409_125b 3341 chrX 21581506 21581572 chrX 21581637 21581693 7 129 2.0 0.0 1.0 3.5 187 chrX 21581506 intergenic not near genes chrX 21581600 intergenic not near genes chrX 21581693 intergenic not near genes chrX_7_21580001 chrX_21580001 RAL-409_125b 3342 chrX 21603818 21603876 chrX 21603959 21604006 14 135 9.5 4.5 7.0 1.8 188 chrX 21603818 intron CG14476 - chrX 21603912 intron CG14476 - chrX 21604006 intron CG14476 - chrX_14_21600001 chrX_21600001 RAL-409_125b 3343 chrX 21668209 21668290 chrX 21668344 21668425 12 133 4.0 1.0 2.5 3.4 216 chrX 21668209 intergenic not near genes chrX 21668317 intergenic not near genes chrX 21668425 intergenic not near genes chrX_12_21665001 chrX_21665001 RAL-409_125b 3344 chrX 22448226 22448294 chrX 22448415 22448483 9 189 2.0 4.5 3.2 2.1 257 chrX 22448226 intron CG14615 - chrX 22448354 intron CG14615 - chrX 22448483 intron CG14615 - chrX_9_22445001 chrX_22445001 RAL-409_125b 3345 chrX 22486926 22486946 chrX 22487053 22487074 5 127 4.0 5.5 4.8 0.9 148 chrX 22486926 intron Cp110 + chrX 22487000 intron Cp110 + chrX 22487074 3` UTR Cp110 + chrX_5_22485001 chrX_22485001 RAL-409_125b 3346 chrX 22585476 22585533 chrX 22585609 22585642 6 130 5.0 1.0 3.0 1.5 166 chrX 22585476 intron Cda4 - chrX 22585559 intron Cda4 - chrX 22585642 intron Cda4 - chrX_6_22585001 chrX_22585001 RAL-409_125b 3347 chrX 22660541 22660589 chrX 22660669 22660723 6 133 7.5 2.0 4.8 1.0 182 chrX 22660541 intron CR44997 + chrX 22660632 intron CR44997 + chrX 22660723 intron CR44997 + chrX_6_22660001 chrX_22660001 RAL-409_125b 3348 chrX 22661968 22661989 chrX 22662103 22662127 4 140 1.0 1.5 1.2 1.8 159 chrX 22661968 intron CR44997 + chrX 22662048 intron CR44997 + chrX 22662127 intron CR44997 + chrX_4_22660001 chrX_22660001 RAL-409_125b 3349 chrX 22677258 22677319 chrX 22677517 22677578 4 259 13.5 18.0 15.8 0.2 320 chrX 22677258 intron CR44997 + chrX 22677418 intron CR44997 + chrX 22677578 intron CR44997 + chrX_4_22675001 chrX_22675001 RAL-409_125b 3350 chrX 22697468 22697511 chrX 22701815 22701858 Juan 14 4345 6.5 8.0 7.2 1.7 4390 chrX 22697468 intron CR44997 + chrX 22699663 intron CR44997 + chrX 22701858 intron CR44997 + chrX_14_22695001 chrX_22695001 RAL-409_125b 3351 chrX 22734415 22734443 chrX 22734541 22734567 4 127 6.0 4.5 5.2 0.6 152 chrX 22734415 intron CR44997 + chrX 22734491 intron CR44997 + chrX 22734567 intron CR44997 + chrX_4_22730001 chrX_22730001 RAL-409_125b 3352 chrX 22771463 22771521 chrX 22774799 22774842 297 13 3330 8.0 7.0 7.5 1.5 3379 chrX 22771463 intron CR44997 + chrX 22773152 intron CR44997 + chrX 22774842 intron CR44997 + chrX_13_22770001 chrX_22770001 RAL-409_125b 3353 chrX 22784056 22784099 chrX 22784163 22784232 9 127 5.5 5.0 5.2 1.5 176 chrX 22784056 intron CR44997 + chrX 22784144 intron CR44997 + chrX 22784232 intron CR44997 + chrX_9_22780001 chrX_22780001 RAL-409_125b 3354 chrX 22798724 22798793 chrX 22798891 22798960 6 161 1.5 2.5 2.0 2.0 236 chrX 22798724 intergenic not near genes chrX 22798842 intergenic not near genes chrX 22798960 intergenic not near genes chrX_6_22795001 chrX_22795001 RAL-409_125b 3355 chrX 22811956 22811980 chrX 22816778 22816802 F-element 4 4820 6.5 5.5 6.0 0.6 4846 chrX 22811956 intergenic CG12446 - chrX 22814379 intergenic not near genes chrX 22816802 intergenic not near genes chrX_4_22810001 chrX_22810001 RAL-409_125b 3356 chrX 22820922 22820991 chrX 22821160 22821229 11 237 3.5 5.0 4.2 2.1 307 chrX 22820922 intergenic not near genes chrX 22821076 intergenic not near genes chrX 22821229 intergenic not near genes chrX_11_22820001 chrX_22820001 RAL-409_125b 3357 chrX 22891099 22891162 chrX 22891232 22891281 8 130 1.0 4.0 2.5 2.3 182 chrX 22891099 intergenic not near genes chrX 22891190 intergenic not near genes chrX 22891281 intergenic not near genes chrX_8_22890001 chrX_22890001 RAL-409_125b 3358 chrX 22922493 22922530 chrX 22922618 22922652 4 124 1.0 5.0 3.0 1.0 159 chrX 22922493 intergenic not near genes chrX 22922572 intergenic not near genes chrX 22922652 intergenic not near genes chrX_4_22920001 chrX_22920001 RAL-409_125b 3359 chrX 22987084 22987123 chrX 22989768 22989830 Burdock 13 2706 6.0 3.5 4.8 2.2 2746 chrX 22987084 intron,intron stnA -,stnB - chrX 22988457 intron,intron stnA -,stnB - chrX 22989830 intron,intron stnA -,stnB - chrX_13_22985001 chrX_22985001 RAL-409_125b 3360 chrX 22996273 22996329 chrX 23003559 23003608 roo 18 7283 4.5 6.5 5.5 2.8 7335 chrX 22996273 intron,intron stnA -,stnB - chrX 22999940 intron,intron stnA -,stnB - chrX 23003608 intron,intron stnA -,stnB - chrX_18_22995001 chrX_22995001 RAL-409_125b 3361 chrY 864678 864728 chrY 864805 864854 4 126 18.0 17.0 17.5 0.2 176 chrY 864678 intergenic not near genes chrY 864766 intergenic not near genes chrY 864854 intergenic not near genes chrY_4_860001 chrY_860001 RAL-409_125b 3362 chrY 975789 975818 chrY 975878 976005 8 130 110.0 119.5 114.8 0.1 216 chrY 975789 intergenic not near genes chrY 975897 intergenic not near genes chrY 976005 intergenic not near genes chrY_8_975001 chrY_975001 RAL-409_125b 3363 chrY 1445413 1445435 chrY 1447394 1447415 10 1980 14.5 20.0 17.2 0.5 2002 chrY 1445413 intergenic not near genes chrY 1446414 intergenic not near genes chrY 1447415 intergenic not near genes chrY_10_1445001 chrY_1445001 RAL-409_125b 3364 chrY 3561971 3562029 chrY 3562104 3562106 4 119 7.5 7.5 7.5 0.5 135 chrY 3561971 intergenic not near genes chrY 3562038 intergenic not near genes chrY 3562106 intergenic not near genes chrY_4_3560001 chrY_3560001 RAL-409_125b