SV#	Chr	Chr_coord_5p	Chr_coord_3p	TE	TE_coord_start	TE_coord_end	Reads_collapsed	Chr_Coord_Dist	Symmetry	avg_blat_score	Norm_RefGen_Reads	Coverage_Ratio	classification	comments	insert_code	loci_code	Sym_score	libname
1	chr2L	162047	162157	1360	4	3384	17	110	'9-8	65.00	4.9	2.9	intron	spen +	chr2L_17_160001	chr2L_160001	0.53	RAL-406
2	chr2L	327333	327425	hobo	2937	13	11	92	'3-8	66.26	5.1	1.8	intron,intron	Plc21C +,CG43755 -	chr2L_11_325001	chr2L_325001	0.27	RAL-406
3	chr2L	833302	833329	jockey	6	21	14	27	'6-8	53.56	11.4	1.1	intergenic	dock +,drongo -	chr2L_14_830001	chr2L_830001	0.43	RAL-406
4	chr2L	1341732	1341832	297	380	6581	7	100	'1-6	68.56	6.0	1.0	exon	CG33923 -	chr2L_7_1340001	chr2L_1340001	0.14	RAL-406
5	chr2L	2195361	2195480	mdg1	420	7039	46	119	'30-16	66.76	9.6	4.3	intron	CG34172 -	chr2L_46_2195001	chr2L_2195001	0.65	RAL-406
6	chr2L	2318577	2318681	diver	225	5905	30	104	'17-13	63.55	8.5	3.2	intron,intron	CG9967 -,eys +	chr2L_30_2315001	chr2L_2315001	0.57	RAL-406
7	chr2L	2408569	2408685	copia	258	4866	27	116	'15-12	67.38	6.7	3.5	3` UTR	VGlut +	chr2L_27_2405001	chr2L_2405001	0.56	RAL-406
8	chr2L	2545228	2545319	roo	31	409	27	91	'19-8	68.07	5.8	4.0	intergenic	not near genes	chr2L_27_2545001	chr2L_2545001	0.70	RAL-406
9	chr2L	2621550	2621602	BS	5068	5037	29	52	'13-16	64.58	8.9	2.9	intergenic	not near genes	chr2L_29_2620001	chr2L_2620001	0.45	RAL-406
10	chr2L	2891484	2891582	FB	10	8	20	98	'11-9	66.18	3.9	4.1	intron	lilli +	chr2L_20_2890001	chr2L_2890001	0.55	RAL-406
11	chr2L	3131843	3131891	jockey	4718	4672	11	48	'5-6	69.02	7.8	1.2	intron	toc -	chr2L_11_3130001	chr2L_3130001	0.45	RAL-406
12	chr2L	3699775	3699903	pogo	11	2098	18	128	'15-3	60.70	5.7	2.7	exon	CG42464 +	chr2L_18_3695001	chr2L_3695001	0.83	RAL-406
13	chr2L	4039203	4039321	roo	407	1	25	118	'13-12	68.97	4.6	4.5	intron	ed +	chr2L_25_4035001	chr2L_4035001	0.52	RAL-406
14	chr2L	4232563	4232696	Tc3	262	265	4	133	'2-2	72.70	7.9	0.4	intergenic	not near genes	chr2L_4_4230001	chr2L_4230001	0.50	RAL-406
15	chr2L	4415831	4415856	jockey	11	13	6	25	'2-4	60.14	3.6	1.3	intron	CG15431 -	chr2L_6_4415001	chr2L_4415001	0.33	RAL-406
16	chr2L	4434241	4434310	FB	1	12	13	69	'9-4	67.20	5.0	2.2	intron,intron,intron	CG15431 -,CG34177 +,CG34178 +	chr2L_13_4430001	chr2L_4430001	0.69	RAL-406
17	chr2L	4766613	4766706	mdg1	1	400	15	93	'9-6	65.43	2.6	4.2	intron	CG15630 -	chr2L_15_4765001	chr2L_4765001	0.60	RAL-406
18	chr2L	5120238	5120403	INE-1	534	564	4	165	'3-1	62.67	6.5	0.5	intron	Msp300 +	chr2L_4_5120001	chr2L_5120001	0.75	RAL-406
19	chr2L	5146367	5146477	S-element	1703	1715	12	110	'5-7	66.30	5.7	1.8	intron	Msp300 +	chr2L_12_5145001	chr2L_5145001	0.42	RAL-406
20	chr2L	5647883	5647929	BS	4996	5014	17	46	'6-11	60.50	12.1	1.3	intron	CG31646 -	chr2L_17_5645001	chr2L_5645001	0.35	RAL-406
21	chr2L	6147601	6147716	297	393	6581	10	115	'4-6	68.04	6.1	1.4	intergenic	not near genes	chr2L_10_6145001	chr2L_6145001	0.40	RAL-406
22	chr2L	6352944	6353057	Stalker2	7247	7648	24	113	'7-17	47.48	5.4	3.8	exon	ppk7 -	chr2L_24_6350001	chr2L_6350001	0.29	RAL-406
23	chr2L	6835487	6835597	roo	404	6	39	110	'16-23	67.04	7.9	4.4	intron	sens-2 +	chr2L_39_6835001	chr2L_6835001	0.41	RAL-406
24	chr2L	6890528	6890634	297	369	6580	11	106	'6-5	64.90	7.1	1.4	intron	Nlg2 +	chr2L_11_6890001	chr2L_6890001	0.55	RAL-406
25	chr2L	7131531	7131622	opus	111	7477	16	91	'7-9	62.45	0.0	16.0	intron	Pvf3 -	chr2L_16_7130001	chr2L_7130001	0.44	RAL-406
26	chr2L	7288954	7289017	412	495	7073	13	63	'3-10	58.48	5.7	1.9	intergenic	not near genes	chr2L_13_7285001	chr2L_7285001	0.23	RAL-406
27	chr2L	7606693	7606788	412	7542	6	11	95	'10-1	54.58	4.2	2.1	exon	Cyp4d21 +	chr2L_11_7605001	chr2L_7605001	0.91	RAL-406
28	chr2L	7774939	7775049	Quasimodo	7359	4	18	110	'8-10	64.88	11.3	1.5	3` UTR	CG7191 +	chr2L_18_7770001	chr2L_7770001	0.44	RAL-406
29	chr2L	7905866	7905952	297	6972	14	11	86	'10-1	71.81	8.2	1.2	intron	Snoo -	chr2L_11_7905001	chr2L_7905001	0.91	RAL-406
30	chr2L	8776813	8777130	G4	3682	3823	7	317	'1-6	54.26	0.7	4.1	intergenic	not near genes	chr2L_7_8775001	chr2L_8775001	0.14	RAL-406
31	chr2L	9012523	9012624	hobo	13	2710	11	101	'5-6	68.04	7.4	1.3	exon	CG13102 +	chr2L_11_9010001	chr2L_9010001	0.45	RAL-406
32	chr2L	9153528	9153625	copia	254	1	29	97	'20-9	67.00	7.8	3.3	intron	CG32982 +	chr2L_29_9150001	chr2L_9150001	0.69	RAL-406
33	chr2L	9321540	9321645	Ivk	1	5372	39	105	'15-24	64.85	9.8	3.6	intergenic	not near genes	chr2L_39_9320001	chr2L_9320001	0.38	RAL-406
34	chr2L	9486275	9486329	jockey	4837	4783	20	54	'12-8	60.41	8.6	2.1	intergenic	not near genes	chr2L_20_9485001	chr2L_9485001	0.60	RAL-406
35	chr2L	9637053	9637171	flea	255	4759	26	118	'18-8	67.18	9.3	2.5	intron	Apoltp +	chr2L_26_9635001	chr2L_9635001	0.69	RAL-406
36	chr2L	9705169	9705300	roo	8666	397	25	131	'21-4	64.90	1.4	10.4	intron,intron	pelo +,CG31710 -	chr2L_25_9705001	chr2L_9705001	0.84	RAL-406
37	chr2L	10053538	10053642	S-element	1707	1	9	104	'5-4	62.59	4.3	1.7	intergenic	CR44875 +	chr2L_9_10050001	chr2L_10050001	0.56	RAL-406
38	chr2L	10305785	10305895	Burdock	1	244	39	110	'26-13	65.50	6.3	5.3	intron	CG5390 -	chr2L_39_10305001	chr2L_10305001	0.67	RAL-406
39	chr2L	11014764	11014830	Juan	3942	4177	19	66	'13-6	64.90	1.3	8.3	intron	Samuel -	chr2L_19_11010001	chr2L_11010001	0.68	RAL-406
40	chr2L	11599560	11599608	G2	2961	3009	16	48	'8-8	62.31	7.2	2.0	intron	kek2 +	chr2L_16_11595001	chr2L_11595001	0.50	RAL-406
41	chr2L	11702616	11702735	Burdock	254	6138	28	119	'13-15	66.07	3.2	6.7	intergenic	not near genes	chr2L_28_11700001	chr2L_11700001	0.46	RAL-406
42	chr2L	12229463	12229489	BS	5075	5045	6	26	'4-2	56.87	3.9	1.2	intron	aret +	chr2L_6_12225001	chr2L_12225001	0.67	RAL-406
43	chr2L	12285915	12286034	INE-1	86	90	5	119	'4-1	79.66	3.9	1.0	intron	aret +	chr2L_5_12285001	chr2L_12285001	0.80	RAL-406
44	chr2L	12584832	12584939	copia	4876	250	28	107	'15-13	65.16	12.0	2.2	intergenic	not near genes	chr2L_28_12580001	chr2L_12580001	0.54	RAL-406
45	chr2L	12878842	12878956	Quasimodo	1	7366	12	114	'9-3	60.88	5.4	1.9	intergenic	not near genes	chr2L_12_12875001	chr2L_12875001	0.75	RAL-406
46	chr2L	13154211	13154339	Juan	1	4213	10	128	'7-3	66.11	3.0	2.5	intergenic	not near genes	chr2L_10_13150001	chr2L_13150001	0.70	RAL-406
47	chr2L	13207969	13208032	Tirant	8117	8478	8	63	'5-3	68.38	8.2	0.9	intron	Pect +	chr2L_8_13205001	chr2L_13205001	0.62	RAL-406
48	chr2L	13684703	13684812	copia	246	2	20	109	'9-11	65.66	7.6	2.3	intron	CG31814 -	chr2L_20_13680001	chr2L_13680001	0.45	RAL-406
49	chr2L	13738992	13739025	hobo	16	50	13	33	'9-4	62.30	5.8	1.9	intergenic	not near genes	chr2L_13_13735001	chr2L_13735001	0.69	RAL-406
50	chr2L	13755548	13755652	mdg1	7454	12	35	104	'26-9	64.46	6.4	4.7	intron,intron	CR44846 +,TM9SF4 +	chr2L_35_13755001	chr2L_13755001	0.74	RAL-406
51	chr2L	14074137	14074258	flea	4755	257	23	121	'5-18	71.15	3.6	5.0	intron	nAChRalpha5 +	chr2L_23_14070001	chr2L_14070001	0.22	RAL-406
52	chr2L	14213502	14213613	roo	8669	404	32	111	'17-15	69.17	8.5	3.4	intron	Dyrk2 -	chr2L_32_14210001	chr2L_14210001	0.53	RAL-406
53	chr2L	14697798	14697829	I-element	5339	5308	16	31	'3-13	69.94	11.3	1.3	intergenic	not near genes	chr2L_16_14695001	chr2L_14695001	0.19	RAL-406
54	chr2L	14716435	14716476	hobo	2924	2912	8	41	'5-3	61.64	8.6	0.8	intergenic	not near genes	chr2L_8_14715001	chr2L_14715001	0.62	RAL-406
55	chr2L	14768156	14768198	I-element	5305	5347	12	42	'5-7	62.12	7.6	1.4	intergenic	not near genes	chr2L_12_14765001	chr2L_14765001	0.42	RAL-406
56	chr2L	14864309	14864337	I-element	5306	5334	15	28	'11-4	65.56	10.8	1.3	intergenic	not near genes	chr2L_15_14860001	chr2L_14860001	0.73	RAL-406
57	chr2L	15234389	15234518	jockey	4710	8	41	129	'29-12	60.78	6.5	5.5	intron	ZnT35C -	chr2L_41_15230001	chr2L_15230001	0.71	RAL-406
58	chr2L	15895303	15895425	297	6581	6974	20	122	'5-15	66.82	8.9	2.0	intergenic	CG31735 +	chr2L_20_15895001	chr2L_15895001	0.25	RAL-406
59	chr2L	15904941	15905045	hopper	2	1400	21	104	'14-7	66.17	7.5	2.5	intergenic	beat-Ib -	chr2L_21_15900001	chr2L_15900001	0.67	RAL-406
60	chr2L	15942801	15942923	HMS-Beagle	247	6795	15	122	'8-7	51.26	5.1	2.5	intron,3` UTR	beat-Ib -,CG12448 +	chr2L_15_15940001	chr2L_15940001	0.53	RAL-406
61	chr2L	15987928	15988025	Ivk	5372	5	20	97	'11-9	61.82	6.8	2.6	intergenic	not near genes	chr2L_20_15985001	chr2L_15985001	0.55	RAL-406
62	chr2L	16092992	16093117	297	395	6581	14	125	'4-10	64.55	6.4	1.9	intergenic	not near genes	chr2L_14_16090001	chr2L_16090001	0.29	RAL-406
63	chr2L	16215089	16215210	pogo	1	2099	36	121	'19-17	67.18	10.2	3.2	intergenic	not near genes	chr2L_36_16215001	chr2L_16215001	0.53	RAL-406
64	chr2L	16228474	16228586	412	6	490	25	112	'15-10	63.42	8.4	2.7	intergenic	not near genes	chr2L_25_16225001	chr2L_16225001	0.60	RAL-406
65	chr2L	16550929	16551037	297	6970	9	16	108	'12-4	66.85	7.1	2.0	intron	CG42389 +	chr2L_16_16550001	chr2L_16550001	0.75	RAL-406
66	chr2L	17288635	17288743	Transpac	3	5218	28	108	'19-9	65.53	6.8	3.6	intergenic	not near genes	chr2L_28_17285001	chr2L_17285001	0.68	RAL-406
67	chr2L	17344453	17344551	mdg1	7445	7046	34	98	'16-18	62.90	5.2	5.5	intergenic	not near genes	chr2L_34_17340001	chr2L_17340001	0.47	RAL-406
68	chr2L	17456373	17456471	17.6	3	7408	25	98	'11-14	67.32	3.3	5.8	intron	CG5050 +	chr2L_25_17455001	chr2L_17455001	0.44	RAL-406
69	chr2L	17897194	17897235	I-element	5304	5345	8	41	'6-2	66.61	2.1	2.6	intergenic	not near genes	chr2L_8_17895001	chr2L_17895001	0.75	RAL-406
70	chr2L	17910865	17910943	hobo	2928	22	16	78	'7-9	59.06	5.5	2.5	intergenic	not near genes	chr2L_16_17910001	chr2L_17910001	0.44	RAL-406
71	chr2L	18483432	18483473	I-element	5304	5345	15	41	'8-7	63.30	10.4	1.3	intron	CG10283 -	chr2L_15_18480001	chr2L_18480001	0.53	RAL-406
72	chr2L	18557686	18557764	roo	396	6	9	78	'5-4	60.62	4.7	1.6	intron	Pde11 -	chr2L_9_18555001	chr2L_18555001	0.56	RAL-406
73	chr2L	19290022	19290074	Doc	285	332	5	52	'3-2	72.36	9.9	0.5	intergenic	not near genes	chr2L_5_19290001	chr2L_19290001	0.60	RAL-406
74	chr2L	19918462	19918513	jockey	59	10	12	51	'4-8	70.14	13.1	0.9	intron	sick +	chr2L_12_19915001	chr2L_19915001	0.33	RAL-406
75	chr2L	20037201	20037316	412	494	6	36	115	'24-12	65.90	7.4	4.3	intron	sNPF +	chr2L_36_20035001	chr2L_20035001	0.67	RAL-406
76	chr2L	20104711	20104772	P-element	2878	3	13	61	'8-5	43.93	8.4	1.4	intergenic	not near genes	chr2L_13_20100001	chr2L_20100001	0.62	RAL-406
77	chr2L	20169327	20169460	invader3	5186	5462	18	133	'10-8	65.08	1.1	8.6	intergenic	not near genes	chr2L_18_20165001	chr2L_20165001	0.56	RAL-406
78	chr2L	20323708	20323820	roo	8670	403	35	112	'24-11	61.81	7.6	4.1	intron	spir +	chr2L_35_20320001	chr2L_20320001	0.69	RAL-406
79	chr2L	20478611	20478720	hopper	1	1409	15	109	'1-14	64.49	6.6	2.0	intron,3` UTR	CR44980 -,CR43234 -	chr2L_15_20475001	chr2L_20475001	0.07	RAL-406
80	chr2L	20530903	20530964	mdg1	7083	406	14	61	'3-11	65.17	5.7	2.1	intergenic	CG44270 +	chr2L_14_20530001	chr2L_20530001	0.21	RAL-406
81	chr2L	20542403	20542511	mdg1	415	6	25	108	'16-9	63.88	9.3	2.4	intergenic	not near genes	chr2L_25_20540001	chr2L_20540001	0.64	RAL-406
82	chr2L	20822782	20822853	Tirant	386	8107	10	71	'8-2	61.94	4.4	1.9	intergenic	CG9331 +	chr2L_10_20820001	chr2L_20820001	0.80	RAL-406
83	chr2L	20841952	20841984	G6	1979	2011	12	32	'8-4	58.17	19.3	0.6	intron	CG31676 +	chr2L_12_20840001	chr2L_20840001	0.67	RAL-406
84	chr2L	20941864	20941969	Max-element	1	297	24	105	'7-17	62.17	9.1	2.4	intergenic	not near genes	chr2L_24_20940001	chr2L_20940001	0.29	RAL-406
85	chr2L	21206199	21206288	P-element	2881	2880	16	89	'7-9	47.92	12.2	1.2	intergenic	clumsy +	chr2L_16_21205001	chr2L_21205001	0.44	RAL-406
86	chr2L	21360383	21360494	HMS-Beagle2	7196	12	27	111	'8-19	61.15	4.5	4.9	intergenic	not near genes	chr2L_27_21360001	chr2L_21360001	0.30	RAL-406
87	chr2L	21570229	21570271	Dm88	47	4363	17	42	'9-8	66.53	7.0	2.1	intergenic	not near genes	chr2L_17_21570001	chr2L_21570001	0.53	RAL-406
88	chr2L	21575225	21575346	opus	112	7500	9	121	'2-7	65.20	8.0	1.0	intron	Lamp1 +	chr2L_9_21575001	chr2L_21575001	0.22	RAL-406
89	chr2L	21719786	21719873	I-element	10	5347	25	87	'5-20	62.34	6.9	3.2	intron	CG31619 +	chr2L_25_21715001	chr2L_21715001	0.20	RAL-406
90	chr2L	21739461	21739498	INE-1	543	536	4	37	'3-1	61.93	11.7	0.3	intergenic	not near genes	chr2L_4_21735001	chr2L_21735001	0.75	RAL-406
91	chr2L	21753619	21753700	P-element	2875	24	9	81	'5-4	45.40	8.2	1.0	5` UTR	step -	chr2L_9_21750001	chr2L_21750001	0.56	RAL-406
92	chr2L	21767433	21767527	jockey	10	4984	25	94	'11-14	60.53	9.1	2.5	intron	CG31612 -	chr2L_25_21765001	chr2L_21765001	0.44	RAL-406
93	chr2L	21768317	21768379	hopper	33	1391	12	62	'4-8	63.66	7.4	1.4	intron	CG31612 -	chr2L_12_21765001	chr2L_21765001	0.33	RAL-406
94	chr2L	21797990	21798066	I-element	5347	12	26	76	'18-8	64.55	8.3	2.8	intergenic	CR44269 -	chr2L_26_21795001	chr2L_21795001	0.69	RAL-406
95	chr2L	22024452	22024553	P-element	2881	2877	13	101	'7-6	50.46	7.0	1.6	3` UTR	tio +	chr2L_13_22020001	chr2L_22020001	0.54	RAL-406
96	chr2L	22177421	22177468	Doc	10	8	19	47	'8-11	66.21	13.8	1.3	intron	CG3635 +	chr2L_19_22175001	chr2L_22175001	0.42	RAL-406
97	chr2L	22224542	22224573	Rt1c	5397	5416	8	31	'5-3	59.65	3.5	1.8	intergenic	not near genes	chr2L_8_22220001	chr2L_22220001	0.62	RAL-406
98	chr2L	22497788	22497832	Tabor	7322	445	4	44	'2-2	65.27	13.0	0.3	intergenic	not near genes	chr2L_4_22495001	chr2L_22495001	0.50	RAL-406
99	chr2L	22731342	22731445	Max-element	5	292	19	103	'8-11	65.21	5.7	2.8	intron	CG40006 -	chr2L_19_22730001	chr2L_22730001	0.42	RAL-406
100	chr2L	23295817	23295880	micropia	5391	8	18	63	'6-12	63.24	8.4	1.9	intergenic	not near genes	chr2L_18_23295001	chr2L_23295001	0.33	RAL-406
101	chr2R	330108	330223	HMS-Beagle2	7198	3	25	115	'11-14	65.87	6.3	3.4	intergenic	not near genes	chr2R_25_330001	chr2R_330001	0.44	RAL-406
102	chr2R	1320678	1320708	diver2	356	333	8	30	'5-3	57.18	16.5	0.5	intergenic	not near genes	chr2R_8_1320001	chr2R_1320001	0.62	RAL-406
103	chr2R	1398679	1398719	Stalker2	37	13	18	40	'8-10	61.79	9.7	1.7	intron	l(2)41Ab +	chr2R_18_1395001	chr2R_1395001	0.44	RAL-406
104	chr2R	1523030	1523062	FB	711	726	10	32	'7-3	60.12	50.4	0.2	intron	Maf1 -	chr2R_10_1520001	chr2R_1520001	0.70	RAL-406
105	chr2R	1983003	1983044	412	3	7097	10	41	'5-5	67.27	6.2	1.4	intron	CG17684 -	chr2R_10_1980001	chr2R_1980001	0.50	RAL-406
106	chr2R	2009385	2009425	I-element	5	20	7	40	'6-1	77.45	4.2	1.3	intron	CG17684 -	chr2R_7_2005001	chr2R_2005001	0.86	RAL-406
107	chr2R	2875181	2875209	TLD2_LTR	98	126	4	28	'2-2	66.29	23.8	0.2	intergenic	not near genes	chr2R_4_2875001	chr2R_2875001	0.50	RAL-406
108	chr2R	2967870	2967976	S-element	1704	4	7	106	'4-3	64.26	6.5	0.9	intron	Scp1 -	chr2R_7_2965001	chr2R_2965001	0.57	RAL-406
109	chr2R	3523851	3523896	Cr1a	4001	4010	10	45	'4-6	64.83	5.6	1.5	intergenic	not near genes	chr2R_10_3520001	chr2R_3520001	0.40	RAL-406
110	chr2R	3594201	3594239	pogo	48	10	8	38	'5-3	68.38	5.3	1.3	intergenic	not near genes	chr2R_8_3590001	chr2R_3590001	0.62	RAL-406
111	chr2R	3921351	3921400	Doc	2	14	22	49	'10-12	67.05	7.7	2.5	intron	uex -	chr2R_22_3920001	chr2R_3920001	0.45	RAL-406
112	chr2R	4185687	4185717	S-element	1701	1671	6	30	'2-4	63.80	6.8	0.8	intergenic	not near genes	chr2R_6_4185001	chr2R_4185001	0.33	RAL-406
113	chr2R	4188986	4189099	S-element	1709	4	12	113	'7-5	63.16	9.2	1.2	intergenic	not near genes	chr2R_12_4185001	chr2R_4185001	0.58	RAL-406
114	chr2R	4339486	4339523	G5A	2784	2804	12	37	'3-9	77.26	9.5	1.1	intron	Gprk1 -	chr2R_12_4335001	chr2R_4335001	0.25	RAL-406
115	chr2R	4671591	4671716	HMS-Beagle2	6883	7199	34	125	'15-19	63.14	5.3	5.4	intergenic	CG17883 +	chr2R_34_4670001	chr2R_4670001	0.44	RAL-406
116	chr2R	4673558	4673589	Quasimodo	7363	7332	8	31	'5-3	66.17	14.4	0.5	3` UTR	CG17883 +	chr2R_8_4670001	chr2R_4670001	0.62	RAL-406
117	chr2R	5074810	5074837	Doc	460	454	4	27	'2-2	61.33	13.3	0.3	intergenic	not near genes	chr2R_4_5070001	chr2R_5070001	0.50	RAL-406
118	chr2R	5129920	5129977	1360	3338	11	6	57	'2-4	67.96	6.2	0.8	intergenic	not near genes	chr2R_6_5125001	chr2R_5125001	0.33	RAL-406
119	chr2R	5179567	5179680	1360	3386	3386	36	113	'19-17	68.50	8.7	3.7	intron	Nipped-A -	chr2R_36_5175001	chr2R_5175001	0.53	RAL-406
120	chr2R	5212074	5212289	INE-1	495	534	4	215	'3-1	60.02	7.9	0.4	intron	Nipped-A -	chr2R_4_5210001	chr2R_5210001	0.75	RAL-406
121	chr2R	5214954	5214992	F-element	20	25	9	38	'3-6	58.33	7.2	1.1	intron	Nipped-A -	chr2R_9_5210001	chr2R_5210001	0.33	RAL-406
122	chr2R	5237865	5237897	Doc	62	30	15	32	'5-10	44.59	13.1	1.1	intron	Nipped-A -	chr2R_15_5235001	chr2R_5235001	0.33	RAL-406
123	chr2R	5303120	5303153	FB	245	249	5	33	'1-4	63.30	3.7	1.1	intergenic	not near genes	chr2R_5_5300001	chr2R_5300001	0.20	RAL-406
124	chr2R	5531164	5531196	1360	63	59	7	32	'2-5	61.47	5.2	1.1	intron	CG30438 +	chr2R_7_5530001	chr2R_5530001	0.29	RAL-406
125	chr2R	5674629	5674727	S-element	1714	1688	16	98	'9-7	63.21	8.8	1.6	intergenic	not near genes	chr2R_16_5670001	chr2R_5670001	0.56	RAL-406
126	chr2R	6362708	6362749	copia	4872	44	9	41	'1-8	68.59	0.0	9.0	intergenic	not near genes	chr2R_9_6360001	chr2R_6360001	0.11	RAL-406
127	chr2R	6492886	6493003	copia	4868	251	36	117	'25-11	66.05	8.4	3.8	intergenic	not near genes	chr2R_36_6490001	chr2R_6490001	0.69	RAL-406
128	chr2R	6682671	6682766	S-element	1695	1714	7	95	'3-4	65.82	5.0	1.2	intron,3` UTR	CG9422 +,CR44165 -	chr2R_7_6680001	chr2R_6680001	0.43	RAL-406
129	chr2R	6914557	6914582	jockey	4712	4691	4	25	'3-1	63.06	2.8	1.1	intron	CG30158 +	chr2R_4_6910001	chr2R_6910001	0.75	RAL-406
130	chr2R	7546244	7546329	hopper	98	4	14	85	'6-8	59.86	11.6	1.1	intron	Corin +	chr2R_14_7545001	chr2R_7545001	0.43	RAL-406
131	chr2R	7727114	7727167	BS	4659	4660	12	53	'8-4	70.70	8.5	1.3	intron	CG18812 -	chr2R_12_7725001	chr2R_7725001	0.67	RAL-406
132	chr2R	7999820	7999934	Quasimodo	7364	5	20	114	'5-15	66.87	9.6	1.9	intergenic	not near genes	chr2R_20_7995001	chr2R_7995001	0.25	RAL-406
133	chr2R	8086770	8086877	1360	3386	6	28	107	'11-17	63.12	6.7	3.6	3` UTR	sut1 +	chr2R_28_8085001	chr2R_8085001	0.39	RAL-406
134	chr2R	9408160	9408235	FB	6	32	8	75	'3-5	69.50	8.9	0.8	intron	wun -	chr2R_8_9405001	chr2R_9405001	0.38	RAL-406
135	chr2R	9684713	9684814	Juan	4025	4205	37	101	'20-17	62.47	9.7	3.5	intergenic	not near genes	chr2R_37_9680001	chr2R_9680001	0.54	RAL-406
136	chr2R	9870946	9871041	roo	14	397	25	95	'13-12	63.05	8.4	2.7	intron	cbx -	chr2R_25_9870001	chr2R_9870001	0.52	RAL-406
137	chr2R	9876813	9876923	mdg3	5250	238	20	110	'18-2	66.43	8.0	2.2	3` UTR	Sec24AB -	chr2R_20_9875001	chr2R_9875001	0.90	RAL-406
138	chr2R	10130603	10130653	F-element	4626	4676	16	50	'4-12	60.22	7.0	2.0	intron	gem +	chr2R_16_10130001	chr2R_10130001	0.25	RAL-406
139	chr2R	10163578	10163650	Juan	4174	4076	28	72	'6-22	68.38	5.4	4.4	intron	KCNQ -	chr2R_28_10160001	chr2R_10160001	0.21	RAL-406
140	chr2R	10389909	10389940	jockey	35	21	5	31	'3-2	59.79	18.6	0.3	intron	CG42732 -	chr2R_5_10385001	chr2R_10385001	0.60	RAL-406
141	chr2R	10585217	10585297	S-element	1691	1709	20	80	'6-14	67.57	3.5	4.4	intron	psq +	chr2R_20_10585001	chr2R_10585001	0.30	RAL-406
142	chr2R	10672407	10672524	roo	8663	404	39	117	'20-19	67.64	9.4	3.8	intergenic	not near genes	chr2R_39_10670001	chr2R_10670001	0.51	RAL-406
143	chr2R	10758894	10758944	jockey	4955	4991	18	50	'7-11	66.55	8.1	2.0	intron	CG33144 -	chr2R_18_10755001	chr2R_10755001	0.39	RAL-406
144	chr2R	10901694	10901763	copia	48	253	18	69	'4-14	63.80	0.4	12.9	intergenic	not near genes	chr2R_18_10900001	chr2R_10900001	0.22	RAL-406
145	chr2R	10956873	10956992	copia	4868	253	41	119	'23-18	64.84	10.8	3.5	intergenic	not near genes	chr2R_41_10955001	chr2R_10955001	0.56	RAL-406
146	chr2R	11074758	11074871	roo	13	9068	18	113	'3-15	65.61	3.2	4.3	intron	luna -	chr2R_18_11070001	chr2R_11070001	0.17	RAL-406
147	chr2R	11129664	11129776	hopper	6	2	25	112	'9-16	62.25	6.9	3.2	intergenic	not near genes	chr2R_25_11125001	chr2R_11125001	0.36	RAL-406
148	chr2R	11185953	11186074	Bari1	1707	4	25	121	'12-13	64.41	8.0	2.8	intron	shn +	chr2R_25_11185001	chr2R_11185001	0.48	RAL-406
149	chr2R	12174308	12174410	P-element	2885	2886	13	102	'7-6	47.97	9.1	1.3	intergenic	Oda -,Cct5 +	chr2R_13_12170001	chr2R_12170001	0.54	RAL-406
150	chr2R	12185308	12185426	accord	7382	2	22	118	'4-18	63.99	15.4	1.3	3` UTR,3` UTR	CG13175 +,CG33964 +	chr2R_22_12185001	chr2R_12185001	0.18	RAL-406
151	chr2R	12269872	12269944	roo	9036	2	20	72	'10-10	68.49	8.2	2.2	intron	Cam +	chr2R_20_12265001	chr2R_12265001	0.50	RAL-406
152	chr2R	12475311	12475393	roo	411	8686	19	82	'13-6	68.16	7.6	2.2	intron	Dh44-R2 +	chr2R_19_12475001	chr2R_12475001	0.68	RAL-406
153	chr2R	12480362	12480552	pogo	59	2095	35	190	'15-20	61.32	8.1	3.8	intron	Dh44-R2 +	chr2R_35_12480001	chr2R_12480001	0.43	RAL-406
154	chr2R	12809519	12809608	flea	17	255	20	89	'3-17	67.12	6.8	2.6	intergenic	not near genes	chr2R_20_12805001	chr2R_12805001	0.15	RAL-406
155	chr2R	12811976	12812092	hobo	4	2709	24	116	'14-10	64.28	7.9	2.7	intergenic	not near genes	chr2R_24_12810001	chr2R_12810001	0.58	RAL-406
156	chr2R	13274226	13274350	roo	8663	409	26	124	'16-10	70.47	4.1	5.1	intron	Dh31-R -	chr2R_26_13270001	chr2R_13270001	0.62	RAL-406
157	chr2R	13562648	13562683	F-element	9	23	5	35	'2-3	55.05	7.5	0.6	intergenic	not near genes	chr2R_5_13560001	chr2R_13560001	0.40	RAL-406
158	chr2R	13570786	13570824	Ivk	5332	5370	14	38	'9-5	61.56	3.4	3.2	3` UTR	CG42807 -	chr2R_14_13570001	chr2R_13570001	0.64	RAL-406
159	chr2R	13714856	13714942	Transpac	35	309	16	86	'7-9	65.00	6.3	2.2	exon	fas +	chr2R_16_13710001	chr2R_13710001	0.44	RAL-406
160	chr2R	14619659	14619774	Stalker2	7648	7251	36	115	'5-31	62.79	10.3	3.2	3` UTR	Sec61beta +	chr2R_36_14615001	chr2R_14615001	0.14	RAL-406
161	chr2R	14642707	14642811	hobo	2932	7	18	104	'4-14	60.90	6.1	2.5	intergenic	not near genes	chr2R_18_14640001	chr2R_14640001	0.22	RAL-406
162	chr2R	14841677	14841791	mdg1	1	415	20	114	'7-13	62.83	7.8	2.3	intergenic	not near genes	chr2R_20_14840001	chr2R_14840001	0.35	RAL-406
163	chr2R	14883258	14883341	X-element	11	4707	31	83	'14-17	63.20	10.2	2.8	intron	Cyp6a20 +	chr2R_31_14880001	chr2R_14880001	0.45	RAL-406
164	chr2R	15118492	15118609	Burdock	6136	6386	36	117	'12-24	66.99	7.1	4.4	intron	chn +	chr2R_36_15115001	chr2R_15115001	0.33	RAL-406
165	chr2R	15160830	15160946	roo	407	1	36	116	'17-19	70.04	7.5	4.2	intron	igl +	chr2R_36_15160001	chr2R_15160001	0.47	RAL-406
166	chr2R	15374754	15374796	1360	12	412	8	42	'3-5	60.04	3.8	1.7	intergenic	not near genes	chr2R_8_15370001	chr2R_15370001	0.38	RAL-406
167	chr2R	15511160	15511272	pogo	2097	8	26	112	'7-19	65.24	8.2	2.8	intergenic	not near genes	chr2R_26_15510001	chr2R_15510001	0.27	RAL-406
168	chr2R	15880511	15880614	297	6584	378	23	103	'7-16	70.82	5.7	3.4	intron	sli -	chr2R_23_15880001	chr2R_15880001	0.30	RAL-406
169	chr2R	16263504	16263611	S-element	1706	1707	26	107	'6-20	61.13	4.1	5.1	exon	fidipidine -	chr2R_26_16260001	chr2R_16260001	0.23	RAL-406
170	chr2R	16373975	16374081	hopper	1411	11	16	106	'10-6	63.79	6.0	2.3	intergenic	not near genes	chr2R_16_16370001	chr2R_16370001	0.62	RAL-406
171	chr2R	16469542	16469644	blood	7377	7012	10	102	'4-6	64.19	3.8	2.1	intergenic	not near genes	chr2R_10_16465001	chr2R_16465001	0.40	RAL-406
172	chr2R	16687622	16687655	roo	394	9040	4	33	'1-3	74.24	12.9	0.3	intron	CG30463 -	chr2R_4_16685001	chr2R_16685001	0.25	RAL-406
173	chr2R	16815884	16816007	roo	412	8664	28	123	'12-16	69.24	8.7	2.9	intergenic	CR44380 -	chr2R_28_16815001	chr2R_16815001	0.43	RAL-406
174	chr2R	17348781	17348848	hobo	2933	37	7	67	'6-1	67.18	3.4	1.6	intron	mbl +	chr2R_7_17345001	chr2R_17345001	0.86	RAL-406
175	chr2R	18296862	18296967	pogo	11	2098	30	105	'5-25	65.55	4.8	5.2	intron	sbb -	chr2R_30_18295001	chr2R_18295001	0.17	RAL-406
176	chr2R	18388214	18388314	roo	13	401	29	100	'15-14	66.89	4.5	5.3	exon	IM3 +	chr2R_29_18385001	chr2R_18385001	0.52	RAL-406
177	chr2R	18513316	18513421	Juan	4208	3888	49	105	'11-38	63.90	8.8	5.0	intergenic	not near genes	chr2R_49_18510001	chr2R_18510001	0.22	RAL-406
178	chr2R	18569485	18569575	mdg1	7449	14	25	90	'20-5	63.99	5.2	4.0	intron	GEFmeso -	chr2R_25_18565001	chr2R_18565001	0.80	RAL-406
179	chr2R	18964637	18964726	412	4	479	21	89	'7-14	65.17	4.8	3.6	intergenic	not near genes	chr2R_21_18960001	chr2R_18960001	0.33	RAL-406
180	chr2R	19046298	19046388	Quasimodo	7343	6	4	90	'3-1	66.11	6.1	0.6	intergenic	not near genes	chr2R_4_19045001	chr2R_19045001	0.75	RAL-406
181	chr2R	19073535	19073638	hopper	1405	8	12	103	'4-8	70.77	4.5	2.2	intron	5-HT1A +	chr2R_12_19070001	chr2R_19070001	0.33	RAL-406
182	chr2R	19186716	19186764	HMS-Beagle2	6883	17	19	48	'5-14	64.49	11.5	1.5	intron	hppy +	chr2R_19_19185001	chr2R_19185001	0.26	RAL-406
183	chr2R	19507157	19507183	I-element	5325	5344	19	26	'11-8	62.65	19.8	0.9	intergenic	not near genes	chr2R_19_19505001	chr2R_19505001	0.58	RAL-406
184	chr2R	19957090	19957186	I-element	5344	1	24	96	'12-12	68.09	4.6	4.3	intergenic	CG44623 +	chr2R_24_19955001	chr2R_19955001	0.50	RAL-406
185	chr2R	20750210	20750308	412	7389	7544	13	98	'4-9	64.67	5.0	2.2	3` UTR	dpr +	chr2R_13_20750001	chr2R_20750001	0.31	RAL-406
186	chr2R	20804642	20804744	pogo	2097	8	14	102	'8-6	62.53	5.2	2.3	intergenic	not near genes	chr2R_14_20800001	chr2R_20800001	0.57	RAL-406
187	chr2R	21069676	21069792	roo	411	8670	38	116	'20-18	69.99	6.0	5.4	intergenic	CR44703 +,Cht9 -	chr2R_38_21065001	chr2R_21065001	0.53	RAL-406
188	chr2R	21234623	21234694	hopper	17	12	14	71	'3-11	66.53	1.2	6.4	intron	ASPP -	chr2R_14_21230001	chr2R_21230001	0.21	RAL-406
189	chr2R	21399948	21400088	roo	408	8663	18	140	'9-9	62.01	3.6	3.9	intron	Sdc -	chr2R_18_21395001	chr2R_21395001	0.50	RAL-406
190	chr2R	21429871	21429923	jockey	4811	4759	25	52	'11-14	65.73	7.6	2.9	intron	Sdc -	chr2R_25_21425001	chr2R_21425001	0.44	RAL-406
191	chr2R	21586095	21586145	roo	8678	363	7	50	'4-3	67.91	0.0	7.0	intergenic	not near genes	chr2R_7_21585001	chr2R_21585001	0.57	RAL-406
192	chr2R	21638653	21638759	copia	243	4871	41	106	'23-18	65.21	8.0	4.6	intergenic	CG10321 +	chr2R_41_21635001	chr2R_21635001	0.56	RAL-406
193	chr2R	21665708	21665757	Doc	77	126	25	49	'12-13	63.11	14.8	1.6	3` UTR,3` UTR	CG42362 +,CG42363 +	chr2R_25_21665001	chr2R_21665001	0.48	RAL-406
194	chr2R	22008261	22008331	roo	404	20	9	70	'7-2	63.74	4.7	1.6	intron	CG34370 -	chr2R_9_22005001	chr2R_22005001	0.78	RAL-406
195	chr2R	22452184	22452279	hopper	1413	110	12	95	'4-8	58.77	1.9	4.1	intergenic	not near genes	chr2R_12_22450001	chr2R_22450001	0.33	RAL-406
196	chr2R	22516140	22516237	Transpac	4931	5216	28	97	'15-13	63.04	1.1	13.3	intron	px -	chr2R_28_22515001	chr2R_22515001	0.54	RAL-406
197	chr2R	22524351	22524428	Stalker4	6862	6862	4	77	'3-1	58.08	8.9	0.4	intron	px -	chr2R_4_22520001	chr2R_22520001	0.75	RAL-406
198	chr2R	22661079	22661166	1360	9	3385	21	87	'5-16	67.34	6.9	2.7	3` UTR,3` UTR,exon	CG13510 +,CG13511 +,CG42565 +	chr2R_21_22660001	chr2R_22660001	0.24	RAL-406
199	chr2R	22746110	22746160	jockey	9	60	5	50	'3-2	64.19	6.0	0.7	intron	CG42260 -	chr2R_5_22745001	chr2R_22745001	0.60	RAL-406
200	chr2R	22777625	22777742	blood	374	7012	50	117	'22-28	66.32	7.7	5.7	intron	CG42260 -	chr2R_50_22775001	chr2R_22775001	0.44	RAL-406
201	chr2R	22798441	22798550	P-element	1	2882	23	109	'15-8	46.89	4.6	4.1	intergenic	CG42260 -	chr2R_23_22795001	chr2R_22795001	0.65	RAL-406
202	chr2R	23025574	23025626	Doc	86	32	24	52	'15-9	64.68	8.6	2.5	intron,intron	twi +,CG42741 -	chr2R_24_23025001	chr2R_23025001	0.62	RAL-406
203	chr2R	23280581	23280654	X-element	45	4707	6	73	'5-1	62.20	2.4	1.8	intergenic	not near genes	chr2R_6_23280001	chr2R_23280001	0.83	RAL-406
204	chr2R	23660336	23660376	hobo	11	6	4	40	'2-2	61.70	6.0	0.6	intron	Pde8 +	chr2R_4_23660001	chr2R_23660001	0.50	RAL-406
205	chr2R	24021547	24021661	pogo	4	2097	27	114	'13-14	64.25	5.4	4.2	intron	CG3907 -	chr2R_27_24020001	chr2R_24020001	0.48	RAL-406
206	chr2R	25016763	25016837	FB	1	19	12	74	'4-8	61.24	8.4	1.3	intron	uzip +	chr2R_12_25015001	chr2R_25015001	0.33	RAL-406
207	chr3L	395382	395418	I-element	5345	5325	9	36	'2-7	64.32	6.4	1.2	intergenic	not near genes	chr3L_9_395001	chr3L_395001	0.22	RAL-406
208	chr3L	1177365	1177421	P-element	3	2876	6	56	'3-3	50.01	3.6	1.3	intergenic	bab2 -	chr3L_6_1175001	chr3L_1175001	0.50	RAL-406
209	chr3L	1495574	1495687	pogo	2095	5	47	113	'20-27	67.14	8.0	5.2	intron	CG12084 -	chr3L_47_1495001	chr3L_1495001	0.43	RAL-406
210	chr3L	1583615	1583735	copia	253	4868	24	120	'2-22	66.52	7.4	2.9	intron	CG13917 +	chr3L_24_1580001	chr3L_1580001	0.08	RAL-406
211	chr3L	1628324	1628364	P-element	16	2845	8	40	'5-3	47.62	3.0	2.0	intron,5` UTR	GC -,CG13928 -	chr3L_8_1625001	chr3L_1625001	0.62	RAL-406
212	chr3L	1630087	1630126	jockey	26	7	10	39	'7-3	60.34	4.0	2.0	intergenic	nSyb -	chr3L_10_1630001	chr3L_1630001	0.70	RAL-406
213	chr3L	2191490	2191581	I-element	5349	13	23	91	'14-9	61.49	9.5	2.2	intron	CG5707 -	chr3L_23_2190001	chr3L_2190001	0.61	RAL-406
214	chr3L	2250752	2250854	412	9	485	24	102	'15-9	64.24	2.1	7.7	intron	CG32305 +	chr3L_24_2250001	chr3L_2250001	0.62	RAL-406
215	chr3L	2345699	2345741	I-element	5308	5350	19	42	'9-10	62.92	22.8	0.8	3` UTR	MsR1 +	chr3L_19_2345001	chr3L_2345001	0.47	RAL-406
216	chr3L	2347398	2347504	3S18	344	2	15	106	'6-9	63.41	16.6	0.9	intergenic	not near genes	chr3L_15_2345001	chr3L_2345001	0.40	RAL-406
217	chr3L	2363708	2363743	I-element	16	31	14	35	'8-6	58.47	28.2	0.5	intergenic	not near genes	chr3L_14_2360001	chr3L_2360001	0.57	RAL-406
218	chr3L	2699453	2699498	I-element	5350	5307	21	45	'8-13	68.74	5.6	3.2	intron	Fife -	chr3L_21_2695001	chr3L_2695001	0.38	RAL-406
219	chr3L	3114442	3114555	Tc3	315	236	6	113	'2-4	69.86	8.7	0.6	intergenic	prominin-like -,CG45067 -	chr3L_6_3110001	chr3L_3110001	0.33	RAL-406
220	chr3L	3114448	3114546	1360	3	3	28	98	'15-13	61.41	8.3	3.0	intergenic	prominin-like -,CG45067 -	chr3L_28_3110001	chr3L_3110001	0.54	RAL-406
221	chr3L	3729072	3729138	hopper	6	29	14	66	'12-2	61.29	6.2	1.9	intron	CG32264 -	chr3L_14_3725001	chr3L_3725001	0.86	RAL-406
222	chr3L	3798566	3798663	1360	3380	13	22	97	'17-5	63.81	5.1	3.6	intron	CG32264 -	chr3L_22_3795001	chr3L_3795001	0.77	RAL-406
223	chr3L	4556245	4556363	297	393	3	23	118	'19-4	68.95	5.8	3.4	intron	CG42540 +	chr3L_23_4555001	chr3L_4555001	0.83	RAL-406
224	chr3L	4627500	4627610	Quasimodo	7364	9	11	110	'7-4	67.38	7.0	1.4	exon	Rpd3 +	chr3L_11_4625001	chr3L_4625001	0.64	RAL-406
225	chr3L	5474899	5474935	Ivk	5334	5370	13	36	'10-3	66.88	9.3	1.3	intergenic	not near genes	chr3L_13_5470001	chr3L_5470001	0.77	RAL-406
226	chr3L	5490045	5490168	opus	498	7115	22	123	'16-6	68.24	7.2	2.7	intergenic	not near genes	chr3L_22_5490001	chr3L_5490001	0.73	RAL-406
227	chr3L	5491627	5491704	1731	3	4587	28	77	'18-10	65.90	8.7	2.9	intergenic	not near genes	chr3L_28_5490001	chr3L_5490001	0.64	RAL-406
228	chr3L	5532941	5533041	297	6590	392	16	100	'8-8	68.75	7.3	1.9	intergenic	not near genes	chr3L_16_5530001	chr3L_5530001	0.50	RAL-406
229	chr3L	5679985	5680063	hopper	1407	5	11	78	'6-5	67.22	7.5	1.3	intron	sif +	chr3L_11_5675001	chr3L_5675001	0.55	RAL-406
230	chr3L	5990153	5990239	hobo	2913	6	6	86	'2-4	59.91	6.1	0.8	intergenic	not near genes	chr3L_6_5990001	chr3L_5990001	0.33	RAL-406
231	chr3L	5991980	5992095	roo	407	8668	44	115	'25-19	66.82	2.5	12.6	intergenic	not near genes	chr3L_44_5990001	chr3L_5990001	0.57	RAL-406
232	chr3L	6011764	6011859	hobo	2919	2	15	95	'4-11	62.45	4.2	2.9	intron	PVRAP +	chr3L_15_6010001	chr3L_6010001	0.27	RAL-406
233	chr3L	6142535	6142651	blood	375	7010	30	116	'18-12	66.74	7.9	3.4	intergenic	Cpr65Aw -	chr3L_30_6140001	chr3L_6140001	0.60	RAL-406
234	chr3L	7236596	7236673	mdg3	5260	5479	28	77	'22-6	50.50	9.3	2.7	intergenic	CG14829 -	chr3L_28_7235001	chr3L_7235001	0.79	RAL-406
235	chr3L	7314664	7314753	hopper	6	4	4	89	'3-1	54.11	2.5	1.1	intergenic	not near genes	chr3L_4_7310001	chr3L_7310001	0.75	RAL-406
236	chr3L	7408366	7408466	pogo	9	2100	14	100	'9-5	64.37	6.8	1.8	intergenic	CR44525 -	chr3L_14_7405001	chr3L_7405001	0.64	RAL-406
237	chr3L	7587371	7587450	roo	404	10	28	79	'14-14	69.28	8.9	2.8	intergenic	CG14838 +	chr3L_28_7585001	chr3L_7585001	0.50	RAL-406
238	chr3L	7836148	7836267	roo	1	408	31	119	'18-13	69.15	9.1	3.1	intron	Pdp1 -	chr3L_31_7835001	chr3L_7835001	0.58	RAL-406
239	chr3L	7867775	7867891	opus	495	3	10	116	'9-1	62.40	7.5	1.2	intergenic	Pdp1 -	chr3L_10_7865001	chr3L_7865001	0.90	RAL-406
240	chr3L	7883875	7883929	FB	1	32	9	54	'3-6	70.22	10.1	0.8	intron	CG32365 +	chr3L_9_7880001	chr3L_7880001	0.33	RAL-406
241	chr3L	8395187	8395222	BS	4790	4824	14	35	'2-12	56.50	10.5	1.2	intergenic	not near genes	chr3L_14_8395001	chr3L_8395001	0.14	RAL-406
242	chr3L	8443054	8443167	412	3	7541	32	113	'14-18	63.62	7.8	3.6	3` UTR	CG6983 -	chr3L_32_8440001	chr3L_8440001	0.44	RAL-406
243	chr3L	8461393	8461473	I-element	23	5349	15	80	'7-8	65.04	6.5	2.0	intron	Gug +	chr3L_15_8460001	chr3L_8460001	0.47	RAL-406
244	chr3L	8738362	8738473	pogo	2089	1	59	111	'26-33	63.13	8.2	6.4	intron	Prm -	chr3L_59_8735001	chr3L_8735001	0.44	RAL-406
245	chr3L	8936883	8936949	BS	5008	5067	26	66	'20-6	64.05	9.8	2.4	intron	CG43783 -	chr3L_26_8935001	chr3L_8935001	0.77	RAL-406
246	chr3L	9042807	9042922	Burdock	6387	6138	21	115	'6-15	67.00	8.1	2.3	intron	Doc1 +	chr3L_21_9040001	chr3L_9040001	0.29	RAL-406
247	chr3L	9531312	9531431	Stalker2	7649	7248	43	119	'25-18	64.21	11.4	3.5	exon	Or67a +	chr3L_43_9530001	chr3L_9530001	0.58	RAL-406
248	chr3L	9554292	9554409	rover	341	6951	17	117	'1-16	70.69	10.2	1.5	intron	CG42673 +	chr3L_17_9550001	chr3L_9550001	0.06	RAL-406
249	chr3L	9590133	9590253	Burdock	254	3	42	120	'23-19	66.23	6.2	5.8	intron	CG42673 +	chr3L_42_9590001	chr3L_9590001	0.55	RAL-406
250	chr3L	9888668	9888767	P-element	3	3	13	99	'7-6	53.15	2.8	3.4	5` UTR	Taf2 -	chr3L_13_9885001	chr3L_9885001	0.54	RAL-406
251	chr3L	10469931	10470039	pogo	2089	4	25	108	'11-14	68.59	6.4	3.4	intergenic	not near genes	chr3L_25_10465001	chr3L_10465001	0.44	RAL-406
252	chr3L	10510296	10510419	opus	7490	7116	12	123	'5-7	65.78	5.3	1.9	intron	A2bp1 +	chr3L_12_10510001	chr3L_10510001	0.42	RAL-406
253	chr3L	11010401	11010465	P-element	1	2864	6	64	'1-5	45.11	5.9	0.9	intergenic	not near genes	chr3L_6_11010001	chr3L_11010001	0.17	RAL-406
254	chr3L	12445144	12445245	pogo	1	2079	38	101	'26-12	61.44	8.6	4.0	intergenic	not near genes	chr3L_38_12445001	chr3L_12445001	0.68	RAL-406
255	chr3L	12471198	12471319	pogo	2100	2	30	121	'8-22	65.88	10.6	2.6	intergenic	not near genes	chr3L_30_12470001	chr3L_12470001	0.27	RAL-406
256	chr3L	12628805	12628922	Juan	4207	4181	25	117	'24-1	63.46	4.5	4.5	intron	CR32111 +	chr3L_25_12625001	chr3L_12625001	0.96	RAL-406
257	chr3L	12704397	12704425	pogo	31	3	9	28	'7-2	65.28	5.6	1.4	intron	mirr +	chr3L_9_12700001	chr3L_12700001	0.78	RAL-406
258	chr3L	12863668	12863785	Transpac	1	306	25	117	'8-17	70.67	4.3	4.7	intergenic	not near genes	chr3L_25_12860001	chr3L_12860001	0.32	RAL-406
259	chr3L	13028489	13028595	I-element	1	5350	28	106	'15-13	62.78	4.0	5.6	intergenic	CR45172 -,CG17672 +	chr3L_28_13025001	chr3L_13025001	0.54	RAL-406
260	chr3L	13238496	13238604	blood	7010	381	31	108	'17-14	60.33	10.4	2.7	intron	caps +	chr3L_31_13235001	chr3L_13235001	0.55	RAL-406
261	chr3L	13333081	13333156	hobo	15	2710	6	75	'5-1	60.33	3.9	1.2	intergenic	not near genes	chr3L_6_13330001	chr3L_13330001	0.83	RAL-406
262	chr3L	13560210	13560235	jockey	4677	4692	7	25	'2-5	63.42	5.9	1.0	intron	bru-3 -	chr3L_7_13560001	chr3L_13560001	0.29	RAL-406
263	chr3L	13589535	13589636	hopper	1	1398	17	101	'8-9	67.87	5.8	2.5	intron	bru-3 -	chr3L_17_13585001	chr3L_13585001	0.47	RAL-406
264	chr3L	13891063	13891176	copia	4	252	35	113	'22-13	66.41	8.1	3.8	intron	dysc -	chr3L_35_13890001	chr3L_13890001	0.63	RAL-406
265	chr3L	13953178	13953274	Burdock	233	6136	21	96	'9-12	66.07	6.1	3.0	intron	CG32137 +	chr3L_21_13950001	chr3L_13950001	0.43	RAL-406
266	chr3L	14088280	14088392	412	486	2	38	112	'18-20	64.22	11.4	3.1	intergenic	not near genes	chr3L_38_14085001	chr3L_14085001	0.47	RAL-406
267	chr3L	14143387	14143429	Doc	8	15	16	42	'9-7	65.33	11.1	1.3	intergenic	not near genes	chr3L_16_14140001	chr3L_14140001	0.56	RAL-406
268	chr3L	14817377	14817484	copia	243	1	36	107	'9-27	66.48	11.0	3.0	intron	CG17839 +	chr3L_36_14815001	chr3L_14815001	0.25	RAL-406
269	chr3L	14850517	14850603	roo	8673	9046	22	86	'15-7	65.65	6.8	2.8	intron	CG17839 +	chr3L_22_14850001	chr3L_14850001	0.68	RAL-406
270	chr3L	15035122	15035227	pogo	2098	2	26	105	'12-14	68.34	7.3	3.1	intron	Sytbeta -	chr3L_26_15035001	chr3L_15035001	0.46	RAL-406
271	chr3L	15037568	15037686	pogo	3	2098	32	118	'18-14	68.68	9.8	3.0	intron	Sytbeta -	chr3L_32_15035001	chr3L_15035001	0.56	RAL-406
272	chr3L	15099556	15099642	G4	3817	3803	13	86	'7-6	55.32	4.0	2.6	intron	CTPsyn +	chr3L_13_15095001	chr3L_15095001	0.54	RAL-406
273	chr3L	15541957	15542071	roo	8667	405	27	114	'9-18	66.81	9.2	2.6	intron	CrebA +	chr3L_27_15540001	chr3L_15540001	0.33	RAL-406
274	chr3L	15623279	15623393	pogo	2098	7	14	114	'6-8	67.07	7.4	1.7	intron,3` UTR	comm3 -,CG7372 +	chr3L_14_15620001	chr3L_15620001	0.43	RAL-406
275	chr3L	16079075	16079192	roo	406	8664	35	117	'17-18	65.25	5.8	5.1	intron	Mbs +	chr3L_35_16075001	chr3L_16075001	0.49	RAL-406
276	chr3L	16223488	16223579	I-element	5349	13	28	91	'19-9	62.77	3.2	6.7	intergenic	not near genes	chr3L_28_16220001	chr3L_16220001	0.68	RAL-406
277	chr3L	16236519	16236615	Juan	4025	4205	24	96	'14-10	61.08	8.5	2.5	3` UTR	l(3)72Dp +	chr3L_24_16235001	chr3L_16235001	0.58	RAL-406
278	chr3L	16523160	16523205	jockey	4759	4804	18	45	'8-10	65.21	17.3	1.0	intron	CG43373 -	chr3L_18_16520001	chr3L_16520001	0.44	RAL-406
279	chr3L	16713115	16713215	hobo	4	2926	23	100	'19-4	62.74	10.7	2.0	intron	Dab +	chr3L_23_16710001	chr3L_16710001	0.83	RAL-406
280	chr3L	16955417	16955521	P-element	2883	10	13	104	'9-4	49.63	7.0	1.6	5` UTR	Nc73EF +	chr3L_13_16955001	chr3L_16955001	0.69	RAL-406
281	chr3L	16973350	16973472	S-element	182	2	19	122	'10-9	67.69	7.2	2.3	intron	Exn +	chr3L_19_16970001	chr3L_16970001	0.53	RAL-406
282	chr3L	17099579	17099660	hopper	1	1411	14	81	'9-5	68.26	8.4	1.5	intron	Rbp6 -	chr3L_14_17095001	chr3L_17095001	0.64	RAL-406
283	chr3L	17170979	17171076	hobo	9	2927	18	97	'15-3	62.06	3.5	4.0	intron	Rbp6 -	chr3L_18_17170001	chr3L_17170001	0.83	RAL-406
284	chr3L	17196524	17196574	hopper	1	1411	8	50	'4-4	62.69	7.5	0.9	intron	Rbp6 -	chr3L_8_17195001	chr3L_17195001	0.50	RAL-406
285	chr3L	17297083	17297157	mdg3	5259	208	19	74	'9-10	67.25	5.1	3.1	intergenic	not near genes	chr3L_19_17295001	chr3L_17295001	0.47	RAL-406
286	chr3L	18113412	18113505	gypsy	449	16	24	93	'11-13	63.74	10.6	2.1	intron,intron	CG32195 +,CG7341 +	chr3L_24_18110001	chr3L_18110001	0.46	RAL-406
287	chr3L	18248228	18248336	Tirant	12	399	11	108	'1-10	65.26	3.8	2.3	intergenic	not near genes	chr3L_11_18245001	chr3L_18245001	0.09	RAL-406
288	chr3L	18419355	18419459	jockey	4679	4988	20	104	'3-17	64.09	6.6	2.6	intergenic	not near genes	chr3L_20_18415001	chr3L_18415001	0.15	RAL-406
289	chr3L	18638501	18638610	Burdock	254	6143	29	109	'13-16	67.53	6.9	3.7	intron	MYPT-75D +	chr3L_29_18635001	chr3L_18635001	0.45	RAL-406
290	chr3L	18815311	18815427	pogo	2	2094	20	116	'14-6	61.72	5.6	3.0	intron	CG14073 -	chr3L_20_18815001	chr3L_18815001	0.70	RAL-406
291	chr3L	18855212	18855369	Doc	4702	4697	5	157	'1-4	75.17	8.0	0.6	intergenic	not near genes	chr3L_5_18855001	chr3L_18855001	0.20	RAL-406
292	chr3L	18926359	18926402	mdg1	3	7084	7	43	'3-4	65.36	7.5	0.8	intron	CG32204 -	chr3L_7_18925001	chr3L_18925001	0.43	RAL-406
293	chr3L	18935755	18935837	Juan	3993	4207	24	82	'14-10	58.15	7.1	3.0	intron	CG32204 -	chr3L_24_18935001	chr3L_18935001	0.58	RAL-406
294	chr3L	19115128	19115242	17.6	491	2	38	114	'20-18	69.50	9.0	3.8	intron	CG14082 -	chr3L_38_19115001	chr3L_19115001	0.53	RAL-406
295	chr3L	19363507	19363538	F-element	19	15	7	31	'2-5	58.75	4.6	1.2	intron	CG32206 -	chr3L_7_19360001	chr3L_19360001	0.29	RAL-406
296	chr3L	19379321	19379440	roo	8670	410	36	119	'19-17	68.50	7.2	4.4	intron	CG32206 -	chr3L_36_19375001	chr3L_19375001	0.53	RAL-406
297	chr3L	19396899	19396949	Doc	6	11	19	50	'6-13	61.93	3.9	3.9	intron	CG32206 -	chr3L_19_19395001	chr3L_19395001	0.32	RAL-406
298	chr3L	19413511	19413548	Idefix	42	5	9	37	'6-3	68.12	9.5	0.9	intergenic	not near genes	chr3L_9_19410001	chr3L_19410001	0.67	RAL-406
299	chr3L	19951179	19951286	Ivk	5	5377	29	107	'14-15	63.02	7.6	3.4	intron	Ac76E +	chr3L_29_19950001	chr3L_19950001	0.48	RAL-406
300	chr3L	20194311	20194413	FB	7	7	11	102	'7-4	66.43	10.5	1.0	intron	CG42674 -	chr3L_11_20190001	chr3L_20190001	0.64	RAL-406
301	chr3L	20281394	20281489	297	390	6	15	95	'12-3	69.88	4.5	2.7	intron	gogo -	chr3L_15_20280001	chr3L_20280001	0.80	RAL-406
302	chr3L	20361670	20361792	pogo	2098	4	36	122	'15-21	65.10	9.3	3.5	intergenic	DNApol-alpha60 -,Toll-9 -	chr3L_36_20360001	chr3L_20360001	0.42	RAL-406
303	chr3L	20411825	20411923	flea	249	4759	28	98	'19-9	67.99	9.3	2.7	intergenic	not near genes	chr3L_28_20410001	chr3L_20410001	0.68	RAL-406
304	chr3L	20464756	20464870	P-element	3	2886	29	114	'16-13	48.73	11.5	2.3	5` UTR,3` UTR	atk -,CG42764 -	chr3L_29_20460001	chr3L_20460001	0.55	RAL-406
305	chr3L	20658303	20658416	roo	8665	406	29	113	'14-15	62.98	7.0	3.6	intergenic	not near genes	chr3L_29_20655001	chr3L_20655001	0.48	RAL-406
306	chr3L	21110120	21110232	roo	6	406	34	112	'15-19	66.58	9.3	3.3	intron	ko -	chr3L_34_21110001	chr3L_21110001	0.44	RAL-406
307	chr3L	21145695	21145723	INE-1	553	561	5	28	'1-4	61.74	5.2	0.8	intron	Ac78C -	chr3L_5_21145001	chr3L_21145001	0.20	RAL-406
308	chr3L	21349320	21349425	S-element	1705	7	14	105	'4-10	65.81	3.9	2.9	intron	CG32436 +	chr3L_14_21345001	chr3L_21345001	0.29	RAL-406
309	chr3L	21379680	21379783	Stalker2	7641	8	28	103	'22-6	61.70	8.9	2.8	intergenic	not near genes	chr3L_28_21375001	chr3L_21375001	0.79	RAL-406
310	chr3L	21582942	21583204	pogo	1	14	49	262	'35-14	65.70	5.0	8.2	intergenic	not near genes	chr3L_49_21580001	chr3L_21580001	0.71	RAL-406
311	chr3L	21771039	21771154	HMS-Beagle	241	6798	18	115	'12-6	64.14	8.0	2.0	intron,3` UTR	CG42689 +,CG7370 +	chr3L_18_21770001	chr3L_21770001	0.67	RAL-406
312	chr3L	21818470	21818588	roo	8666	9071	41	118	'20-21	65.77	7.4	4.9	intergenic	not near genes	chr3L_41_21815001	chr3L_21815001	0.49	RAL-406
313	chr3L	22317946	22318061	Stalker2	404	7250	30	115	'14-16	65.41	6.7	3.9	intron	Ten-m -	chr3L_30_22315001	chr3L_22315001	0.47	RAL-406
314	chr3L	22490837	22490945	mdg1	7	7459	31	108	'8-23	66.92	7.5	3.6	intergenic	not near genes	chr3L_31_22490001	chr3L_22490001	0.26	RAL-406
315	chr3L	22515896	22516012	297	6585	393	23	116	'10-13	67.04	5.9	3.3	intergenic	not near genes	chr3L_23_22515001	chr3L_22515001	0.43	RAL-406
316	chr3L	22728081	22728158	P-element	2886	2877	11	77	'3-8	58.11	7.4	1.3	intergenic	CG11367 +,CG14450 -	chr3L_11_22725001	chr3L_22725001	0.27	RAL-406
317	chr3L	22744673	22744719	FB	13	16	10	46	'6-4	75.64	5.0	1.7	intron	CG7369 +	chr3L_10_22740001	chr3L_22740001	0.60	RAL-406
318	chr3L	22767842	22767942	I-element	5343	1	33	100	'18-15	65.45	7.7	3.8	intron	SPoCk +	chr3L_33_22765001	chr3L_22765001	0.55	RAL-406
319	chr3L	22831248	22831365	297	1	6971	23	117	'13-10	66.80	5.0	3.8	intron	jim -	chr3L_23_22830001	chr3L_22830001	0.57	RAL-406
320	chr3L	22894965	22895003	jockey	4809	4771	7	38	'4-3	62.72	6.9	0.9	intergenic	not near genes	chr3L_7_22890001	chr3L_22890001	0.57	RAL-406
321	chr3L	22984712	22984819	pogo	2097	13	20	107	'18-2	68.03	6.1	2.8	intergenic	not near genes	chr3L_20_22980001	chr3L_22980001	0.90	RAL-406
322	chr3L	23143312	23143360	S-element	1703	1713	5	48	'1-4	70.08	6.2	0.7	intergenic	not near genes	chr3L_5_23140001	chr3L_23140001	0.20	RAL-406
323	chr3L	23146473	23146513	1360	12	37	11	40	'5-6	68.55	10.3	1.0	intergenic	not near genes	chr3L_11_23145001	chr3L_23145001	0.45	RAL-406
324	chr3L	23250589	23250627	pogo	42	4	14	38	'6-8	66.06	9.7	1.3	intron	nAChRalpha4 +	chr3L_14_23250001	chr3L_23250001	0.43	RAL-406
325	chr3L	23839698	23839726	McClintock	5955	6	12	28	'10-2	61.49	5.6	1.8	intergenic	CG40470 -	chr3L_12_23835001	chr3L_23835001	0.83	RAL-406
326	chr3L	25272524	25272577	1360	3381	73	9	53	'4-5	69.51	6.0	1.3	intron	CG40467 -	chr3L_9_25270001	chr3L_25270001	0.44	RAL-406
327	chr3L	25341453	25341562	HMS-Beagle	6808	7041	24	109	'9-15	63.41	5.9	3.5	intergenic	not near genes	chr3L_24_25340001	chr3L_25340001	0.38	RAL-406
328	chr3L	25484283	25484402	copia	4869	254	23	119	'15-8	66.49	6.0	3.3	intron	CG41343 -	chr3L_23_25480001	chr3L_25480001	0.65	RAL-406
329	chr3L	25750118	25750166	rover	7275	345	16	48	'8-8	64.97	7.0	2.0	intergenic	not near genes	chr3L_16_25750001	chr3L_25750001	0.50	RAL-406
330	chr3L	27362266	27362304	Doc	1	16	8	38	'4-4	55.24	6.5	1.1	intron	Dbp80 +	chr3L_8_27360001	chr3L_27360001	0.50	RAL-406
331	chr3L	27364092	27364188	412	7537	7069	14	96	'4-10	62.57	7.8	1.6	intron	Dbp80 +	chr3L_14_27360001	chr3L_27360001	0.29	RAL-406
332	chr3L	27865364	27865474	copia	4872	248	36	110	'26-10	66.76	9.6	3.4	intergenic	not near genes	chr3L_36_27865001	chr3L_27865001	0.72	RAL-406
333	chr3R	643430	643553	opus	111	7500	12	123	'6-6	75.67	4.2	2.3	intergenic	not near genes	chr3R_12_640001	chr3R_640001	0.50	RAL-406
334	chr3R	902576	902606	R1A1-element	5305	5314	4	30	'2-2	63.29	4.7	0.7	intron	CG42621 +	chr3R_4_900001	chr3R_900001	0.50	RAL-406
335	chr3R	3179350	3179391	S-element	1333	1334	8	41	'1-7	67.66	11.6	0.6	intron	CG42617 -	chr3R_8_3175001	chr3R_3175001	0.12	RAL-406
336	chr3R	3578254	3578375	copia	1	257	34	121	'17-17	66.22	9.1	3.4	intron	Parp -	chr3R_34_3575001	chr3R_3575001	0.50	RAL-406
337	chr3R	4166078	4166119	297	6972	355	16	41	'9-7	66.20	4.5	2.9	intergenic	not near genes	chr3R_16_4165001	chr3R_4165001	0.56	RAL-406
338	chr3R	4194282	4194390	17.6	8	492	24	108	'5-19	67.82	5.7	3.6	intergenic	not near genes	chr3R_24_4190001	chr3R_4190001	0.21	RAL-406
339	chr3R	4535408	4535484	I-element	12	5350	13	76	'5-8	55.23	9.2	1.3	intron	CG34357 -	chr3R_13_4535001	chr3R_4535001	0.38	RAL-406
340	chr3R	4576509	4576700	Tc3	116	200	5	191	'4-1	54.14	7.1	0.6	intergenic	not near genes	chr3R_5_4575001	chr3R_4575001	0.80	RAL-406
341	chr3R	4916703	4916806	gypsy5	396	6942	36	103	'20-16	64.14	4.5	6.5	intron	Cdep +	chr3R_36_4915001	chr3R_4915001	0.56	RAL-406
342	chr3R	5056866	5056979	roo	2	405	31	113	'13-18	66.97	5.2	5.0	intergenic	not near genes	chr3R_31_5055001	chr3R_5055001	0.42	RAL-406
343	chr3R	5442367	5442460	Ivk	20	5376	30	93	'13-17	65.18	5.9	4.3	intron	CG14669 +	chr3R_30_5440001	chr3R_5440001	0.43	RAL-406
344	chr3R	5768526	5768639	Transpac	3	304	21	113	'13-8	68.88	5.2	3.4	intron	CG2082 -	chr3R_21_5765001	chr3R_5765001	0.62	RAL-406
345	chr3R	6068886	6068993	mdg1	11	418	26	107	'6-20	68.42	6.7	3.4	intergenic	not near genes	chr3R_26_6065001	chr3R_6065001	0.23	RAL-406
346	chr3R	6128651	6128702	Doc	4	10	24	51	'9-15	63.33	6.9	3.0	intergenic	not near genes	chr3R_24_6125001	chr3R_6125001	0.38	RAL-406
347	chr3R	6479115	6479189	hopper	1412	1377	12	74	'7-5	67.96	6.3	1.6	5` UTR	CG15186 +	chr3R_12_6475001	chr3R_6475001	0.58	RAL-406
348	chr3R	6595569	6595633	copia	240	4905	14	64	'8-6	68.39	6.1	2.0	intergenic	not near genes	chr3R_14_6595001	chr3R_6595001	0.57	RAL-406
349	chr3R	6598323	6598365	HMS-Beagle	6796	6838	12	42	'7-5	65.71	8.8	1.2	intergenic	CG1138 -	chr3R_12_6595001	chr3R_6595001	0.58	RAL-406
350	chr3R	6601163	6601276	412	6	491	27	113	'16-11	63.94	8.9	2.7	intergenic	CG31482 +	chr3R_27_6600001	chr3R_6600001	0.59	RAL-406
351	chr3R	6616423	6616506	Juan	4203	4030	26	83	'8-18	58.82	12.5	1.9	intergenic	not near genes	chr3R_26_6615001	chr3R_6615001	0.31	RAL-406
352	chr3R	6977422	6977496	hobo	2933	24	8	74	'4-4	57.92	3.7	1.7	intron	Antp -	chr3R_8_6975001	chr3R_6975001	0.50	RAL-406
353	chr3R	7006261	7006362	mdg1	402	7038	22	101	'11-11	65.73	4.4	4.1	intergenic	not near genes	chr3R_22_7005001	chr3R_7005001	0.50	RAL-406
354	chr3R	7139047	7139145	I-element	5347	7	34	98	'19-15	64.78	9.3	3.3	intron	Fer1 +	chr3R_34_7135001	chr3R_7135001	0.56	RAL-406
355	chr3R	7370046	7370166	Transpac	5228	1	38	120	'20-18	68.61	8.9	3.8	intergenic	not near genes	chr3R_38_7370001	chr3R_7370001	0.53	RAL-406
356	chr3R	7475033	7475163	Tc3	242	242	7	130	'6-1	69.85	8.2	0.8	intergenic	snRNA:7SK -	chr3R_7_7475001	chr3R_7475001	0.86	RAL-406
357	chr3R	7477454	7477492	BS	5015	4994	19	38	'9-10	58.40	10.3	1.7	intergenic	not near genes	chr3R_19_7475001	chr3R_7475001	0.47	RAL-406
358	chr3R	7597431	7597526	Stalker4	8	392	19	95	'7-12	64.27	8.4	2.0	intron	CG34127 -	chr3R_19_7595001	chr3R_7595001	0.37	RAL-406
359	chr3R	7597442	7597492	Stalker	19	359	9	50	'6-3	67.57	10.2	0.8	intron	CG34127 -	chr3R_9_7595001	chr3R_7595001	0.67	RAL-406
360	chr3R	7837061	7837173	Tabor	7321	5	27	112	'19-8	63.06	8.3	2.9	intron	CG34384 +	chr3R_27_7835001	chr3R_7835001	0.70	RAL-406
361	chr3R	8287384	8287509	412	7104	76	5	125	'1-4	66.18	6.3	0.7	intron	CR44318 +	chr3R_5_8285001	chr3R_8285001	0.20	RAL-406
362	chr3R	8457024	8457144	blood	7011	376	30	120	'20-10	66.48	10.9	2.5	intron	CG45263 -	chr3R_30_8455001	chr3R_8455001	0.67	RAL-406
363	chr3R	8551543	8551586	412	461	489	19	43	'6-13	65.05	10.7	1.6	intergenic	not near genes	chr3R_19_8550001	chr3R_8550001	0.32	RAL-406
364	chr3R	8711929	8712039	roo	411	8677	32	110	'19-13	68.93	8.0	3.6	intergenic	not near genes	chr3R_32_8710001	chr3R_8710001	0.59	RAL-406
365	chr3R	8873446	8873530	297	6586	6581	4	84	'2-2	56.23	9.8	0.4	intron	pyd -	chr3R_4_8870001	chr3R_8870001	0.50	RAL-406
366	chr3R	9114540	9114579	jockey	4949	4987	10	39	'9-1	68.20	8.3	1.1	intron	pum -	chr3R_10_9110001	chr3R_9110001	0.90	RAL-406
367	chr3R	9124270	9124390	springer	7137	382	17	120	'10-7	66.16	6.2	2.4	intron	pum -	chr3R_17_9120001	chr3R_9120001	0.59	RAL-406
368	chr3R	9348640	9348778	S-element	1713	4	18	138	'7-11	66.50	5.2	2.9	intron	CG45050 +	chr3R_18_9345001	chr3R_9345001	0.39	RAL-406
369	chr3R	9626789	9626910	blood	1	378	37	121	'22-15	65.88	11.7	2.9	intron	CG9427 -	chr3R_37_9625001	chr3R_9625001	0.59	RAL-406
370	chr3R	9748014	9748121	P-element	2880	2883	12	107	'7-5	49.72	11.7	0.9	intron	PpD3 +	chr3R_12_9745001	chr3R_9745001	0.58	RAL-406
371	chr3R	10196892	10196924	Quasimodo	7357	7325	5	32	'2-3	68.79	6.6	0.7	exon	Syn +	chr3R_5_10195001	chr3R_10195001	0.40	RAL-406
372	chr3R	10685037	10685133	Transpac	304	4924	16	96	'5-11	65.99	8.5	1.7	intergenic	not near genes	chr3R_16_10685001	chr3R_10685001	0.31	RAL-406
373	chr3R	10741072	10741146	1360	3	3355	14	74	'10-4	59.92	6.7	1.8	intron	TkR86C -	chr3R_14_10740001	chr3R_10740001	0.71	RAL-406
374	chr3R	11186537	11186577	BS	5083	5043	16	40	'6-10	62.35	7.5	1.9	intergenic	not near genes	chr3R_16_11185001	chr3R_11185001	0.38	RAL-406
375	chr3R	11569011	11569052	jockey	4954	4995	12	41	'7-5	58.77	7.7	1.4	intergenic	Mrp4 +	chr3R_12_11565001	chr3R_11565001	0.58	RAL-406
376	chr3R	11767728	11767776	roo	39	5	18	48	'10-8	66.99	8.0	2.0	3` UTR	l(3)neo38 -	chr3R_18_11765001	chr3R_11765001	0.56	RAL-406
377	chr3R	11904307	11904409	hobo	4	2927	12	102	'10-2	63.61	7.0	1.5	intron	Cad87A -	chr3R_12_11900001	chr3R_11900001	0.83	RAL-406
378	chr3R	11911211	11911330	S-element	4	1715	27	119	'18-9	64.09	7.6	3.1	intron	Cad87A -	chr3R_27_11910001	chr3R_11910001	0.67	RAL-406
379	chr3R	12047404	12047489	Stalker2	401	4	25	85	'14-11	60.33	4.9	4.2	intergenic	not near genes	chr3R_25_12045001	chr3R_12045001	0.56	RAL-406
380	chr3R	12134445	12134510	diver	50	219	19	65	'7-12	66.54	9.5	1.8	intergenic	not near genes	chr3R_19_12130001	chr3R_12130001	0.37	RAL-406
381	chr3R	12199803	12199845	jockey	36	15	7	42	'5-2	64.87	7.0	0.9	intergenic	CG3809 +	chr3R_7_12195001	chr3R_12195001	0.71	RAL-406
382	chr3R	12723246	12723343	I-element	5344	2	39	97	'16-23	61.76	9.5	3.7	intergenic	not near genes	chr3R_39_12720001	chr3R_12720001	0.41	RAL-406
383	chr3R	12727535	12727635	297	6964	11	16	100	'12-4	64.48	6.2	2.2	intergenic	CR44231 +	chr3R_16_12725001	chr3R_12725001	0.75	RAL-406
384	chr3R	12736646	12736764	roo	2	408	21	118	'13-8	70.23	7.1	2.6	intergenic	not near genes	chr3R_21_12735001	chr3R_12735001	0.62	RAL-406
385	chr3R	12787362	12787408	jockey	4704	4670	10	46	'7-3	62.10	9.4	1.0	intergenic	not near genes	chr3R_10_12785001	chr3R_12785001	0.70	RAL-406
386	chr3R	12787869	12787950	297	395	6594	14	81	'10-4	67.60	6.2	1.9	intergenic	not near genes	chr3R_14_12785001	chr3R_12785001	0.71	RAL-406
387	chr3R	12837779	12837818	I-element	5349	5310	17	39	'9-8	64.99	11.0	1.4	intergenic	not near genes	chr3R_17_12835001	chr3R_12835001	0.53	RAL-406
388	chr3R	12901302	12901418	mdg1	417	1	28	116	'19-9	62.77	6.7	3.6	intergenic	not near genes	chr3R_28_12900001	chr3R_12900001	0.68	RAL-406
389	chr3R	12901931	12902032	roo	8667	408	24	101	'7-17	69.44	6.0	3.4	intergenic	not near genes	chr3R_24_12900001	chr3R_12900001	0.29	RAL-406
390	chr3R	12930698	12930726	jockey	14	14	5	28	'3-2	61.95	4.8	0.9	intron	beat-Vb +	chr3R_5_12930001	chr3R_12930001	0.60	RAL-406
391	chr3R	13582438	13582546	S-element	2	1707	18	108	'11-7	69.64	5.9	2.6	intergenic	not near genes	chr3R_18_13580001	chr3R_13580001	0.61	RAL-406
392	chr3R	13624497	13624613	mdg1	7459	7042	36	116	'20-16	65.13	7.9	4.0	intergenic	not near genes	chr3R_36_13620001	chr3R_13620001	0.56	RAL-406
393	chr3R	14660964	14661064	pogo	6	2083	29	100	'25-4	62.61	9.3	2.8	3` UTR	Hexim +	chr3R_29_14660001	chr3R_14660001	0.86	RAL-406
394	chr3R	14688299	14688340	pogo	44	3	22	41	'11-11	60.09	5.6	3.3	intron	Meltrin -	chr3R_22_14685001	chr3R_14685001	0.50	RAL-406
395	chr3R	14839188	14839319	roo	410	8660	24	131	'8-16	67.17	5.3	3.8	intron	btsz -	chr3R_24_14835001	chr3R_14835001	0.33	RAL-406
396	chr3R	14873608	14873712	hopper	14	1412	13	104	'6-7	64.78	5.1	2.1	intron	btsz -	chr3R_13_14870001	chr3R_14870001	0.46	RAL-406
397	chr3R	15696632	15696729	I-element	5183	5340	38	97	'17-21	64.96	6.6	5.0	3` UTR	CG5399 +	chr3R_38_15695001	chr3R_15695001	0.45	RAL-406
398	chr3R	15783216	15783330	297	5	6972	22	114	'9-13	67.54	5.8	3.2	intergenic	not near genes	chr3R_22_15780001	chr3R_15780001	0.41	RAL-406
399	chr3R	16225564	16225624	P-element	1	2866	5	60	'2-3	48.86	8.9	0.5	intergenic	tara +	chr3R_5_16225001	chr3R_16225001	0.40	RAL-406
400	chr3R	16331573	16331609	1360	11	46	10	36	'4-6	70.83	6.8	1.3	intron	Sulf1 -	chr3R_10_16330001	chr3R_16330001	0.40	RAL-406
401	chr3R	16407399	16407515	Burdock	2	6387	36	116	'20-16	67.64	8.9	3.6	intergenic	CR45630 +	chr3R_36_16405001	chr3R_16405001	0.56	RAL-406
402	chr3R	17056990	17057109	S-element	2	1713	24	119	'14-10	67.93	7.0	3.0	intron	Dad +	chr3R_24_17055001	chr3R_17055001	0.58	RAL-406
403	chr3R	17095848	17095964	HMS-Beagle2	5	311	32	116	'14-18	64.81	7.0	4.0	intron	cher -	chr3R_32_17095001	chr3R_17095001	0.44	RAL-406
404	chr3R	17121505	17121749	pogo	2090	11	27	244	'14-13	64.68	3.7	5.7	intron	cher -	chr3R_27_17120001	chr3R_17120001	0.52	RAL-406
405	chr3R	17177122	17177229	roo	395	8664	30	107	'22-8	64.89	3.5	6.7	intron	Mur89F -	chr3R_30_17175001	chr3R_17175001	0.73	RAL-406
406	chr3R	17221573	17221687	roo	406	8668	38	114	'17-21	64.31	7.8	4.3	intron	CG31262 -	chr3R_38_17220001	chr3R_17220001	0.45	RAL-406
407	chr3R	17262911	17262996	roo	8664	393	11	85	'6-5	67.64	9.5	1.0	intron	beat-IIb -	chr3R_11_17260001	chr3R_17260001	0.55	RAL-406
408	chr3R	17340836	17340866	Ivk	5361	5332	5	30	'2-3	65.22	3.9	1.0	intron	beat-IIa -	chr3R_5_17340001	chr3R_17340001	0.40	RAL-406
409	chr3R	17495978	17496094	mdg1	7038	7454	26	116	'10-16	64.96	7.0	3.2	intron	Dscam3 -	chr3R_26_17495001	chr3R_17495001	0.38	RAL-406
410	chr3R	17603622	17603713	Juan	2	4203	6	91	'3-3	62.23	9.2	0.6	intergenic	not near genes	chr3R_6_17600001	chr3R_17600001	0.50	RAL-406
411	chr3R	17733249	17733338	INE-1	551	561	10	89	'8-2	64.21	5.6	1.5	intergenic	Lgr1 +,CG14321 +	chr3R_10_17730001	chr3R_17730001	0.80	RAL-406
412	chr3R	17857324	17857431	Juan	1	4211	39	107	'19-20	62.75	10.8	3.3	intron	tinc +	chr3R_39_17855001	chr3R_17855001	0.49	RAL-406
413	chr3R	17863927	17864035	roo	6	405	27	108	'20-7	63.04	6.1	3.8	intron	tinc +	chr3R_27_17860001	chr3R_17860001	0.74	RAL-406
414	chr3R	18009728	18009833	opus	499	19	24	105	'15-9	68.22	8.3	2.6	intron	cpo +	chr3R_24_18005001	chr3R_18005001	0.62	RAL-406
415	chr3R	18118047	18118133	I-element	7	5349	8	86	'3-5	66.69	9.2	0.8	intron	sr +	chr3R_8_18115001	chr3R_18115001	0.38	RAL-406
416	chr3R	18149443	18149532	roo	8664	9040	35	89	'21-14	65.63	8.0	3.9	intergenic	not near genes	chr3R_35_18145001	chr3R_18145001	0.60	RAL-406
417	chr3R	18156963	18157083	S-element	1713	2	19	120	'3-16	67.97	5.8	2.8	intergenic	not near genes	chr3R_19_18155001	chr3R_18155001	0.16	RAL-406
418	chr3R	18731635	18731740	Transpac	5228	4931	14	105	'12-2	66.49	7.9	1.6	3` UTR	Cha +	chr3R_14_18730001	chr3R_18730001	0.86	RAL-406
419	chr3R	18962548	18962656	hobo	2936	7	25	108	'6-19	66.14	6.1	3.5	intron,intron	CG42613 +,CG43732 +	chr3R_25_18960001	chr3R_18960001	0.24	RAL-406
420	chr3R	19094212	19094269	P-element	2875	13	4	57	'2-2	43.75	7.6	0.5	5` UTR	cdi -	chr3R_4_19090001	chr3R_19090001	0.50	RAL-406
421	chr3R	19131543	19131661	S-element	1713	3	17	118	'9-8	64.92	9.0	1.7	3` UTR	CG6040 +	chr3R_17_19130001	chr3R_19130001	0.53	RAL-406
422	chr3R	19182015	19182522	pogo	5	2093	48	507	'22-26	63.66	3.5	10.7	intron	CG31475 +	chr3R_48_19180001	chr3R_19180001	0.46	RAL-406
423	chr3R	19488834	19488901	pogo	2098	17	7	67	'5-2	68.11	10.8	0.6	intron	Dys +	chr3R_7_19485001	chr3R_19485001	0.71	RAL-406
424	chr3R	19803757	19803857	copia	254	14	28	100	'15-13	62.17	6.5	3.7	intron	bnl -	chr3R_28_19800001	chr3R_19800001	0.54	RAL-406
425	chr3R	19956982	19957103	blood	7009	375	36	121	'21-15	65.93	8.8	3.7	intron	Hs6st -	chr3R_36_19955001	chr3R_19955001	0.58	RAL-406
426	chr3R	20238458	20238536	mdg1	383	7044	13	78	'6-7	68.65	0.2	10.8	intron	Nlg4 +	chr3R_13_20235001	chr3R_20235001	0.46	RAL-406
427	chr3R	20383422	20383537	HMS-Beagle	5	244	14	115	'5-9	66.89	5.2	2.3	intron	Gfrl -	chr3R_14_20380001	chr3R_20380001	0.36	RAL-406
428	chr3R	20398340	20398440	Transpac	4922	301	36	100	'25-11	63.33	7.1	4.4	intron	Gfrl -	chr3R_36_20395001	chr3R_20395001	0.69	RAL-406
429	chr3R	20427386	20427431	jockey	11	20	10	45	'3-7	61.56	10.1	0.9	intron	Gfrl -	chr3R_10_20425001	chr3R_20425001	0.30	RAL-406
430	chr3R	20435461	20435578	Burdock	6389	3	42	117	'25-17	64.56	4.8	7.2	intron	Gfrl -	chr3R_42_20435001	chr3R_20435001	0.60	RAL-406
431	chr3R	20475177	20475217	F-element	23	22	9	40	'5-4	58.27	5.7	1.3	intron	Gfrl -	chr3R_9_20475001	chr3R_20475001	0.56	RAL-406
432	chr3R	20497309	20497355	jockey	9	14	12	46	'7-5	68.06	8.8	1.2	intergenic	not near genes	chr3R_12_20495001	chr3R_20495001	0.58	RAL-406
433	chr3R	20518459	20518573	pogo	3	2094	43	114	'30-13	68.01	9.6	4.1	intergenic	not near genes	chr3R_43_20515001	chr3R_20515001	0.70	RAL-406
434	chr3R	20555424	20555528	mdg3	5258	5487	23	104	'17-6	65.15	9.3	2.2	intron	att-ORFA -	chr3R_23_20555001	chr3R_20555001	0.74	RAL-406
435	chr3R	20675845	20675930	jockey	4677	4988	21	85	'12-9	62.02	10.0	1.9	intergenic	CG4000 -	chr3R_21_20675001	chr3R_20675001	0.57	RAL-406
436	chr3R	20878194	20878306	roo	8670	407	37	112	'20-17	71.05	10.0	3.4	exon	TotZ +	chr3R_37_20875001	chr3R_20875001	0.54	RAL-406
437	chr3R	21057157	21057248	blood	11	361	22	91	'13-9	62.07	7.5	2.6	intron	Mvl -	chr3R_22_21055001	chr3R_21055001	0.59	RAL-406
438	chr3R	21582234	21582348	S-element	2	1715	15	114	'9-6	69.09	6.5	2.0	intron	InR -	chr3R_15_21580001	chr3R_21580001	0.60	RAL-406
439	chr3R	21604807	21604915	Juan	4024	4208	31	108	'17-14	65.93	4.2	6.0	intron	InR -	chr3R_31_21600001	chr3R_21600001	0.55	RAL-406
440	chr3R	21807268	21807370	mdg3	5265	5494	26	102	'15-11	61.50	3.8	5.4	intron	CASK -	chr3R_26_21805001	chr3R_21805001	0.58	RAL-406
441	chr3R	21862234	21862265	X-element	4708	4677	10	31	'5-5	60.51	9.5	1.0	intergenic	CR45645 -	chr3R_10_21860001	chr3R_21860001	0.50	RAL-406
442	chr3R	22081446	22081557	roo	8668	403	34	111	'17-17	66.17	7.1	4.2	intron	CG13408 +	chr3R_34_22080001	chr3R_22080001	0.50	RAL-406
443	chr3R	22204736	22204857	flea	256	4758	24	121	'18-6	67.33	6.5	3.2	intron,intron	SKIP +,CR45224 -	chr3R_24_22200001	chr3R_22200001	0.75	RAL-406
444	chr3R	22282840	22282886	jockey	14	10	11	46	'5-6	59.77	9.1	1.1	intron	SKIP +	chr3R_11_22280001	chr3R_22280001	0.45	RAL-406
445	chr3R	22308785	22308832	springer	7135	7152	5	47	'2-3	74.59	10.0	0.5	3` UTR	CG34377 -	chr3R_5_22305001	chr3R_22305001	0.40	RAL-406
446	chr3R	22368088	22368193	pogo	2089	3	33	105	'8-25	62.23	7.3	4.0	intron	PyK +	chr3R_33_22365001	chr3R_22365001	0.24	RAL-406
447	chr3R	22818746	22818856	mdg1	416	6	34	110	'24-10	65.72	8.0	3.8	intergenic	not near genes	chr3R_34_22815001	chr3R_22815001	0.71	RAL-406
448	chr3R	22822182	22822219	F-element	85	48	11	37	'7-4	62.03	6.6	1.4	intergenic	not near genes	chr3R_11_22820001	chr3R_22820001	0.64	RAL-406
449	chr3R	22932053	22932080	jockey	4810	4758	7	27	'6-1	68.08	6.5	0.9	intron	klg +	chr3R_7_22930001	chr3R_22930001	0.86	RAL-406
450	chr3R	23067609	23067648	opus	463	497	22	39	'11-11	66.50	31.0	0.7	intergenic	CG17111 -	chr3R_22_23065001	chr3R_23065001	0.50	RAL-406
451	chr3R	23085601	23085681	297	41	394	17	80	'5-12	72.65	6.5	2.3	intron	CG13830 -	chr3R_17_23085001	chr3R_23085001	0.29	RAL-406
452	chr3R	23222648	23222745	S-element	1715	1711	18	97	'14-4	64.34	8.6	1.9	intron	cnc -	chr3R_18_23220001	chr3R_23220001	0.78	RAL-406
453	chr3R	23416385	23416457	roo	9033	8662	15	72	'4-11	67.46	7.6	1.7	intron	CG4374 -	chr3R_15_23415001	chr3R_23415001	0.27	RAL-406
454	chr3R	23446762	23446872	pogo	3	2091	25	110	'14-11	63.82	5.6	3.8	intron	CG4374 -	chr3R_25_23445001	chr3R_23445001	0.56	RAL-406
455	chr3R	23502057	23502150	roo	18	407	28	93	'5-23	66.27	7.2	3.4	intergenic	not near genes	chr3R_28_23500001	chr3R_23500001	0.18	RAL-406
456	chr3R	23789119	23789226	1360	1	3379	25	107	'16-9	67.48	5.7	3.7	intron	mbc +	chr3R_25_23785001	chr3R_23785001	0.64	RAL-406
457	chr3R	24106068	24106126	jockey	4665	4681	15	58	'8-7	64.77	11.3	1.2	intron	4EHP -	chr3R_15_24105001	chr3R_24105001	0.53	RAL-406
458	chr3R	24167219	24167249	F-element	17	24	5	30	'4-1	48.15	5.0	0.8	intron	Apc2 +	chr3R_5_24165001	chr3R_24165001	0.80	RAL-406
459	chr3R	24425584	24425710	blood	7016	377	28	126	'17-11	64.88	8.0	3.1	intron	nAChRalpha1 -	chr3R_28_24425001	chr3R_24425001	0.61	RAL-406
460	chr3R	24466212	24466326	412	496	8	37	114	'21-16	61.84	8.0	4.1	intergenic	not near genes	chr3R_37_24465001	chr3R_24465001	0.57	RAL-406
461	chr3R	24662200	24662237	jockey	4983	4984	13	37	'7-6	59.26	11.1	1.1	intergenic	slo +,Ppox -	chr3R_13_24660001	chr3R_24660001	0.54	RAL-406
462	chr3R	24687412	24687517	jockey	4986	10	27	105	'17-10	64.06	9.8	2.5	intron	slo +	chr3R_27_24685001	chr3R_24685001	0.63	RAL-406
463	chr3R	24797678	24797790	diver	4	220	32	112	'12-20	64.80	8.7	3.3	3` UTR,3` UTR	Ets96B +,Ude -	chr3R_32_24795001	chr3R_24795001	0.38	RAL-406
464	chr3R	24990694	24990724	Doc	10	19	7	30	'3-4	59.62	5.0	1.2	intron	tnc +	chr3R_7_24990001	chr3R_24990001	0.43	RAL-406
465	chr3R	25125494	25125610	copia	4874	256	32	116	'17-15	69.21	10.3	2.8	3` UTR	vig2 +	chr3R_32_25125001	chr3R_25125001	0.53	RAL-406
466	chr3R	25541259	25541340	297	6973	2	6	81	'5-1	51.12	5.5	0.9	intron	msi +	chr3R_6_25540001	chr3R_25540001	0.83	RAL-406
467	chr3R	26146958	26147031	I-element	5342	8	13	73	'5-8	57.46	11.3	1.1	intergenic	not near genes	chr3R_13_26145001	chr3R_26145001	0.38	RAL-406
468	chr3R	26287296	26287414	copia	257	4872	30	118	'24-6	66.37	8.5	3.2	intergenic	not near genes	chr3R_30_26285001	chr3R_26285001	0.80	RAL-406
469	chr3R	26540215	26540299	FB	8	1	13	84	'9-4	64.40	5.3	2.1	intron	scrib +	chr3R_13_26540001	chr3R_26540001	0.69	RAL-406
470	chr3R	26765675	26765772	hobo	2935	5	19	97	'6-13	66.25	5.9	2.8	intergenic	not near genes	chr3R_19_26765001	chr3R_26765001	0.32	RAL-406
471	chr3R	26968361	26968455	FB	3	19	18	94	'13-5	62.97	6.5	2.4	intron	CG5521 +	chr3R_18_26965001	chr3R_26965001	0.72	RAL-406
472	chr3R	27668312	27668424	Transpac	303	3	16	112	'3-13	64.85	6.2	2.2	intron	unc80 +	chr3R_16_27665001	chr3R_27665001	0.19	RAL-406
473	chr3R	28097496	28097613	diver	4	225	28	117	'17-11	67.33	9.0	2.8	intergenic	not near genes	chr3R_28_28095001	chr3R_28095001	0.61	RAL-406
474	chr3R	28282379	28282501	pogo	2100	1	33	122	'19-14	65.81	9.0	3.3	intergenic	CG34436 +	chr3R_33_28280001	chr3R_28280001	0.58	RAL-406
475	chr3R	28804647	28804763	mdg1	416	7038	29	116	'24-5	65.52	7.8	3.3	intergenic	not near genes	chr3R_29_28800001	chr3R_28800001	0.83	RAL-406
476	chr3R	28951890	28951921	jockey	10	17	6	31	'3-3	60.20	5.3	1.0	intron	CG14521 -	chr3R_6_28950001	chr3R_28950001	0.50	RAL-406
477	chr3R	29432733	29432840	297	6584	382	25	107	'5-20	67.78	6.6	3.3	intron	Ptp99A +	chr3R_25_29430001	chr3R_29430001	0.20	RAL-406
478	chr3R	29660712	29660809	mdg1	417	20	30	97	'23-7	63.78	5.5	4.6	intergenic	not near genes	chr3R_30_29660001	chr3R_29660001	0.77	RAL-406
479	chr3R	30266443	30266544	Quasimodo	7352	6	19	101	'5-14	68.52	7.5	2.2	intergenic	not near genes	chr3R_19_30265001	chr3R_30265001	0.26	RAL-406
480	chr3R	30505509	30505621	412	491	2	16	112	'10-6	66.73	6.3	2.2	exon	PH4alphaSG1 -	chr3R_16_30505001	chr3R_30505001	0.62	RAL-406
481	chr3R	30859370	30859521	Burdock	257	6135	33	151	'15-18	59.68	2.2	10.3	intergenic	not near genes	chr3R_33_30855001	chr3R_30855001	0.45	RAL-406
482	chr3R	31141647	31141758	roo	407	8667	20	111	'8-12	67.75	7.9	2.2	intron	Gycbeta100B +	chr3R_20_31140001	chr3R_31140001	0.40	RAL-406
483	chr3R	31447199	31447282	opus	491	12	10	83	'9-1	66.32	2.5	2.9	intron	Gprk2 +	chr3R_10_31445001	chr3R_31445001	0.90	RAL-406
484	chr3R	31680440	31680485	Doc	51	5	18	45	'8-10	65.24	14.0	1.2	intergenic	CR44091 -	chr3R_18_31680001	chr3R_31680001	0.44	RAL-406
485	chr3R	31910235	31910349	roo	3	405	42	114	'19-23	65.03	5.5	6.5	intron	heph -	chr3R_42_31910001	chr3R_31910001	0.45	RAL-406
486	chr3R	32069202	32069254	Juan	1	49	8	52	'2-6	70.23	10.4	0.7	intergenic	not near genes	chr3R_8_32065001	chr3R_32065001	0.25	RAL-406
487	chr4	799088	799195	P-element	2883	7	13	107	'8-5	48.84	7.0	1.6	5` UTR	CG11231 +	chr4_13_795001	chr4_795001	0.62	RAL-406
488	chr4	1029359	1029466	pogo	5	2096	35	107	'25-10	67.18	9.2	3.4	5` UTR,5` UTR	CR44031 +,CG11077 -	chr4_35_1025001	chr4_1025001	0.71	RAL-406
489	chrX	544337	544440	roo	403	12	35	103	'20-15	67.14	3.6	7.6	intron	Appl +	chrX_35_540001	chrX_540001	0.57	RAL-406
490	chrX	670654	670701	jockey	9	57	8	47	'4-4	65.30	4.3	1.5	intergenic	not near genes	chrX_8_670001	chrX_670001	0.50	RAL-406
491	chrX	749602	749721	roo	1	408	36	119	'12-24	64.59	6.0	5.1	3` UTR	CG13362 -	chrX_36_745001	chrX_745001	0.33	RAL-406
492	chrX	771913	771992	1360	3372	22	21	79	'6-15	72.49	6.9	2.7	intron	fz3 +	chrX_21_770001	chrX_770001	0.29	RAL-406
493	chrX	1019052	1019150	hopper	1408	1411	8	98	'5-3	68.59	4.1	1.6	intron,intron	su(w[a]) +,CG11638 -	chrX_8_1015001	chrX_1015001	0.62	RAL-406
494	chrX	1288882	1288932	jockey	4990	4938	17	50	'5-12	65.81	9.1	1.7	3` UTR	CG32812 +	chrX_17_1285001	chrX_1285001	0.29	RAL-406
495	chrX	2954571	2954676	roo	8664	400	16	105	'8-8	67.31	2.8	4.2	intron,intron	kirre +,rst -	chrX_16_2950001	chrX_2950001	0.50	RAL-406
496	chrX	3232596	3232725	flea	257	4755	19	129	'11-8	65.38	6.0	2.7	intron	dnc +	chrX_19_3230001	chrX_3230001	0.58	RAL-406
497	chrX	3296498	3296566	opus	495	7034	12	68	'9-3	65.71	5.8	1.8	intron	dnc +	chrX_12_3295001	chrX_3295001	0.75	RAL-406
498	chrX	3465633	3465661	hopper	31	1410	8	28	'3-5	50.63	0.7	4.7	intron	CR44999 +	chrX_8_3465001	chrX_3465001	0.38	RAL-406
499	chrX	3535135	3535165	Tc1-2	1398	1398	5	30	'3-2	44.69	5.4	0.8	intron	CG32791 -	chrX_5_3535001	chrX_3535001	0.60	RAL-406
500	chrX	3561822	3561906	roo	8690	398	28	84	'14-14	68.82	4.1	5.5	intron,intron	CG32791 -,ppk8 +	chrX_28_3560001	chrX_3560001	0.50	RAL-406
501	chrX	4268077	4268178	mdg1	16	7455	19	101	'7-12	62.38	4.6	3.4	intergenic	not near genes	chrX_19_4265001	chrX_4265001	0.37	RAL-406
502	chrX	4292424	4292505	hopper	4	264	7	81	'4-3	67.17	5.3	1.1	intergenic	not near genes	chrX_7_4290001	chrX_4290001	0.57	RAL-406
503	chrX	4297920	4298022	412	479	5	19	102	'11-8	66.50	5.9	2.8	intergenic	not near genes	chrX_19_4295001	chrX_4295001	0.58	RAL-406
504	chrX	4346309	4346391	412	494	1	10	82	'3-7	65.78	4.5	1.8	intron	norpA +	chrX_10_4345001	chrX_4345001	0.30	RAL-406
505	chrX	4504275	4504344	hobo	2929	3	10	69	'2-8	57.81	3.5	2.2	intron	CR32773 -	chrX_10_4500001	chrX_4500001	0.20	RAL-406
506	chrX	4703125	4703174	S-element	1685	36	6	49	'4-2	65.54	3.7	1.3	intron	l(1)G0334 +	chrX_6_4700001	chrX_4700001	0.67	RAL-406
507	chrX	5340700	5340784	P-element	2862	9	16	84	'9-7	47.78	5.1	2.6	intron	SK +	chrX_16_5340001	chrX_5340001	0.56	RAL-406
508	chrX	5487277	5487387	mdg1	7043	7456	25	110	'8-17	68.60	4.7	4.4	intron	SPR +	chrX_25_5485001	chrX_5485001	0.32	RAL-406
509	chrX	5641137	5641181	pogo	47	1	19	44	'8-11	67.10	6.8	2.4	intron	CG42492 -	chrX_19_5640001	chrX_5640001	0.42	RAL-406
510	chrX	6121169	6121262	pogo	19	2089	14	93	'5-9	62.14	8.7	1.4	intron	Ca-alpha1T -	chrX_14_6120001	chrX_6120001	0.36	RAL-406
511	chrX	6219046	6219111	blood	7019	342	18	65	'12-6	66.72	4.1	3.5	exon	Btd -	chrX_18_6215001	chrX_6215001	0.67	RAL-406
512	chrX	6308341	6308447	HMS-Beagle	241	11	18	106	'10-8	67.03	4.7	3.2	intergenic	not near genes	chrX_18_6305001	chrX_6305001	0.56	RAL-406
513	chrX	6439083	6439121	Ivk	5335	5373	10	38	'5-5	63.68	2.2	3.1	intron	CG42340 -	chrX_10_6435001	chrX_6435001	0.50	RAL-406
514	chrX	6499026	6499136	roo	9041	31	10	110	'8-2	66.51	8.7	1.0	intron	CG42340 -	chrX_10_6495001	chrX_6495001	0.80	RAL-406
515	chrX	7048247	7048347	roo	395	2	27	100	'17-10	68.04	8.8	2.8	intron	CG12541 -	chrX_27_7045001	chrX_7045001	0.63	RAL-406
516	chrX	7887148	7887180	297	34	6583	7	32	'3-4	71.72	9.0	0.7	3` UTR	CG10932 -	chrX_7_7885001	chrX_7885001	0.43	RAL-406
517	chrX	8027415	8027518	Juan	4208	1	24	103	'19-5	59.82	10.0	2.2	intergenic	Tbh +	chrX_24_8025001	chrX_8025001	0.79	RAL-406
518	chrX	8344873	8344991	roo	406	8664	26	118	'10-16	67.81	4.4	4.8	intron	nAChRalpha3 -	chrX_26_8340001	chrX_8340001	0.38	RAL-406
519	chrX	8382796	8382847	Doc	4	17	14	51	'3-11	62.18	8.5	1.5	intergenic	not near genes	chrX_14_8380001	chrX_8380001	0.21	RAL-406
520	chrX	9202728	9202778	jockey	63	12	10	50	'4-6	72.77	9.6	0.9	intergenic	not near genes	chrX_10_9200001	chrX_9200001	0.40	RAL-406
521	chrX	9413315	9413430	Transpac	2	5224	34	115	'24-10	65.75	6.9	4.3	intron	mgl -	chrX_34_9410001	chrX_9410001	0.71	RAL-406
522	chrX	9892232	9892281	jockey	4670	4709	12	49	'8-4	67.13	9.8	1.1	intron	CG15249 -	chrX_12_9890001	chrX_9890001	0.67	RAL-406
523	chrX	10265272	10265380	1360	16	3386	18	108	'8-10	66.97	4.9	3.1	intergenic	CG12643 -	chrX_18_10265001	chrX_10265001	0.44	RAL-406
524	chrX	10295405	10295509	roo	14	406	22	104	'8-14	64.97	3.6	4.8	intron	alpha-Man-I -	chrX_22_10295001	chrX_10295001	0.36	RAL-406
525	chrX	10757727	10757794	jockey	4994	4666	11	67	'6-5	63.28	6.5	1.5	intergenic	Rph -	chrX_11_10755001	chrX_10755001	0.55	RAL-406
526	chrX	12084901	12084998	roo	18	403	16	97	'6-10	66.14	3.3	3.7	intron,intron	CR43960 +,Ten-a +	chrX_16_12080001	chrX_12080001	0.38	RAL-406
527	chrX	12144139	12144249	opus	7491	2	12	110	'5-7	63.72	5.9	1.7	intron	Ten-a +	chrX_12_12140001	chrX_12140001	0.42	RAL-406
528	chrX	12273092	12273156	hopper	1412	1372	7	64	'4-3	68.68	4.8	1.2	intron	Ten-a +	chrX_7_12270001	chrX_12270001	0.57	RAL-406
529	chrX	12417036	12417084	Doc	16	9	17	48	'7-10	65.32	6.7	2.2	intergenic	not near genes	chrX_17_12415001	chrX_12415001	0.41	RAL-406
530	chrX	12666425	12666496	P-element	2875	9	11	71	'5-6	46.15	6.9	1.4	intron	Tis11 +	chrX_11_12665001	chrX_12665001	0.45	RAL-406
531	chrX	12718035	12718145	S-element	1710	1714	19	110	'12-7	67.83	4.7	3.3	intron,3` UTR	Smr -,CR43963 -	chrX_19_12715001	chrX_12715001	0.63	RAL-406
532	chrX	13026414	13026514	hobo	2931	9	10	100	'3-7	66.59	3.1	2.4	intron	rad +	chrX_10_13025001	chrX_13025001	0.30	RAL-406
533	chrX	13221513	13221552	I-element	5307	5346	13	39	'6-7	64.78	5.8	1.9	intron	mew -	chrX_13_13220001	chrX_13220001	0.46	RAL-406
534	chrX	13441768	13441855	Juan	4207	14	31	87	'16-15	63.50	0.5	20.7	intergenic	not near genes	chrX_31_13440001	chrX_13440001	0.52	RAL-406
535	chrX	13538438	13538474	hobo	12	48	7	36	'5-2	63.31	5.5	1.1	intergenic	not near genes	chrX_7_13535001	chrX_13535001	0.71	RAL-406
536	chrX	13634370	13634469	roo	8677	400	22	99	'7-15	67.47	3.0	5.5	intron	NFAT +	chrX_22_13630001	chrX_13630001	0.32	RAL-406
537	chrX	13749472	13749530	S-element	7	1708	13	58	'3-10	72.07	3.3	3.0	intron	Pdcd4 -	chrX_13_13745001	chrX_13745001	0.23	RAL-406
538	chrX	13759793	13759891	roo	8664	403	12	98	'6-6	67.32	3.0	3.0	exon	Yp3 +	chrX_12_13755001	chrX_13755001	0.50	RAL-406
539	chrX	13800870	13800962	FB	8	29	13	92	'6-7	59.10	3.8	2.7	intron	inaE +	chrX_13_13800001	chrX_13800001	0.46	RAL-406
540	chrX	14329153	14329258	jockey	9	4990	22	105	'6-16	59.25	7.3	2.7	intron	dpr8 +	chrX_22_14325001	chrX_14325001	0.27	RAL-406
541	chrX	14343378	14343478	copia	248	4	21	100	'7-14	65.06	4.3	4.0	intron	dpr8 +	chrX_21_14340001	chrX_14340001	0.33	RAL-406
542	chrX	14493264	14493377	3S18	4	337	26	113	'19-7	64.14	6.7	3.4	intergenic	not near genes	chrX_26_14490001	chrX_14490001	0.73	RAL-406
543	chrX	14579729	14579839	diver	7	221	28	110	'10-18	67.01	7.1	3.5	intergenic	not near genes	chrX_28_14575001	chrX_14575001	0.36	RAL-406
544	chrX	14682104	14682196	hobo	2920	3	10	92	'3-7	65.65	2.1	3.2	intergenic	not near genes	chrX_10_14680001	chrX_14680001	0.30	RAL-406
545	chrX	14853351	14853399	P-element	23	2856	8	48	'2-6	42.51	6.4	1.1	intron	Flo2 +	chrX_8_14850001	chrX_14850001	0.25	RAL-406
546	chrX	15386749	15386844	opus	5	486	6	95	'1-5	66.68	5.2	1.0	3` UTR	Cngl -	chrX_6_15385001	chrX_15385001	0.17	RAL-406
547	chrX	15946739	15946794	flea	4951	258	7	55	'4-3	72.75	4.1	1.4	intergenic	mmd -,Rrp47 +	chrX_7_15945001	chrX_15945001	0.57	RAL-406
548	chrX	16877701	16877816	hopper	1414	5	18	115	'13-5	65.40	4.4	3.3	intergenic	not near genes	chrX_18_16875001	chrX_16875001	0.72	RAL-406
549	chrX	16947592	16947628	1360	46	3379	11	36	'6-5	63.16	4.2	2.1	intron	RhoGAP15B +	chrX_11_16945001	chrX_16945001	0.55	RAL-406
550	chrX	17029982	17030102	invader3	5186	280	10	120	'7-3	66.40	6.8	1.3	intron	CG45002 -	chrX_10_17025001	chrX_17025001	0.70	RAL-406
551	chrX	17104353	17104460	412	7542	5	27	107	'17-10	64.78	8.9	2.7	3` UTR	CG4991 +	chrX_27_17100001	chrX_17100001	0.63	RAL-406
552	chrX	17161467	17161538	hobo	2708	2	17	71	'8-9	64.28	7.9	1.9	intron	baz +	chrX_17_17160001	chrX_17160001	0.47	RAL-406
553	chrX	17446234	17446352	roo	406	1	33	118	'8-25	70.46	5.5	5.1	intergenic	p-cup -	chrX_33_17445001	chrX_17445001	0.24	RAL-406
554	chrX	17456045	17456124	jockey	4969	4685	14	79	'8-6	61.42	7.1	1.7	intergenic	not near genes	chrX_14_17455001	chrX_17455001	0.57	RAL-406
555	chrX	17622384	17622471	412	7086	494	4	87	'1-3	75.43	5.2	0.6	intergenic	not near genes	chrX_4_17620001	chrX_17620001	0.25	RAL-406
556	chrX	18128503	18128553	1360	3369	3357	13	50	'5-8	62.32	20.3	0.6	intergenic	mir-210 +	chrX_13_18125001	chrX_18125001	0.38	RAL-406
557	chrX	18193706	18193813	hopper	7	1408	16	107	'8-8	62.57	4.5	2.9	intron	Frq2 +	chrX_16_18190001	chrX_18190001	0.50	RAL-406
558	chrX	19004265	19004347	roo	8694	407	24	82	'12-12	67.92	3.4	5.5	intron	CG43759 +	chrX_24_19000001	chrX_19000001	0.50	RAL-406
559	chrX	19115583	19115696	flea	248	4758	28	113	'19-9	66.44	8.0	3.1	intergenic	not near genes	chrX_28_19115001	chrX_19115001	0.68	RAL-406
560	chrX	19310931	19311243	jockey	10	4985	16	312	'11-5	65.36	2.8	4.2	3` UTR	out -	chrX_16_19310001	chrX_19310001	0.69	RAL-406
561	chrX	19745675	19745714	Max-element	305	267	4	39	'2-2	71.05	24.2	0.2	3` UTR,3` UTR	CG33932 +,Rpp20 +	chrX_4_19745001	chrX_19745001	0.50	RAL-406
562	chrX	19859402	19859440	412	4	40	10	38	'6-4	65.95	8.1	1.1	intergenic	Nup205 +,CG15618 -	chrX_10_19855001	chrX_19855001	0.60	RAL-406
563	chrX	19878081	19878188	roo	8662	403	29	107	'15-14	70.65	9.1	2.9	intron	Hers +	chrX_29_19875001	chrX_19875001	0.52	RAL-406
564	chrX	20276551	20276683	412	5	7542	10	132	'5-5	64.33	2.2	3.1	intergenic	not near genes	chrX_10_20275001	chrX_20275001	0.50	RAL-406
565	chrX	20452358	20452480	Transpac	310	4919	26	122	'17-9	69.06	6.8	3.3	intron	CG32506 +	chrX_26_20450001	chrX_20450001	0.65	RAL-406
566	chrX	20620521	20620616	pogo	13	2085	22	95	'14-8	67.24	2.3	6.7	intron	RunxA -	chrX_22_20620001	chrX_20620001	0.64	RAL-406
567	chrX	20867612	20867656	jockey	4677	4699	7	44	'2-5	62.18	1.7	2.6	intron	shakB -	chrX_7_20865001	chrX_20865001	0.29	RAL-406
568	chrX	21087583	21087677	mdg3	19	241	9	94	'8-1	62.35	2.3	2.7	intergenic	not near genes	chrX_9_21085001	chrX_21085001	0.89	RAL-406
569	chrX	21122814	21122930	Bari1	9	1707	27	116	'12-15	68.50	7.4	3.2	intergenic	not near genes	chrX_27_21120001	chrX_21120001	0.44	RAL-406
570	chrX	21198857	21198968	mdg3	5251	239	16	111	'10-6	63.75	3.5	3.6	intergenic	not near genes	chrX_16_21195001	chrX_21195001	0.62	RAL-406
571	chrX	21474407	21474435	1731	4333	49	15	28	'7-8	69.41	7.1	1.9	intergenic	not near genes	chrX_15_21470001	chrX_21470001	0.47	RAL-406
572	chrX	21589417	21589522	1360	4	3380	27	105	'16-11	65.76	5.6	4.1	intergenic	not near genes	chrX_27_21585001	chrX_21585001	0.59	RAL-406
573	chrX	21667899	21667934	gypsy2	6532	6509	7	35	'4-3	67.21	1.6	2.7	intergenic	not near genes	chrX_7_21665001	chrX_21665001	0.57	RAL-406
574	chrX	22442618	22442654	1360	3344	3355	6	36	'2-4	62.64	11.9	0.5	intergenic	not near genes	chrX_6_22440001	chrX_22440001	0.33	RAL-406
575	chrX	22589314	22589348	I-element	5305	5340	17	34	'11-6	70.50	6.3	2.3	intron	Cda4 -	chrX_17_22585001	chrX_22585001	0.65	RAL-406
576	chrX	23108307	23108337	BS3	1435	1405	7	30	'4-3	57.93	23.7	0.3	3` UTR	ATbp +	chrX_7_23105001	chrX_23105001	0.57	RAL-406
577	chrY	424978	425019	McClintock	6421	6395	8	41	'1-7	76.04	1.2	3.6	intergenic	not near genes	chrY_8_420001	chrY_420001	0.12	RAL-406
578	chrY	3271646	3271748	roo	8673	9062	22	102	'16-6	68.27	8.5	2.3	intergenic	not near genes	chrY_22_3270001	chrY_3270001	0.73	RAL-406