SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 47446 47482 chr2L 52571 52574 jockey 9 5121 4.5 11.0 7.8 1.0 5128 chr2L 47446 intron Cda5 - chr2L 50010 intron Cda5 - chr2L 52574 intron Cda5 - chr2L_9_50001 chr2L_50001 RAL-406 2 chr2L 80144 80191 chr2L 80250 80297 10 102 7.0 5.0 6.0 1.4 153 chr2L 80144 intergenic not near genes chr2L 80220 intergenic not near genes chr2L 80297 intergenic not near genes chr2L_10_80001 chr2L_80001 RAL-406 3 chr2L 172038 172083 chr2L 172139 172184 13 98 7.0 3.5 5.2 2.1 146 chr2L 172038 intron spen + chr2L 172111 intron spen + chr2L 172184 intron spen + chr2L_13_170001 chr2L_170001 RAL-406 4 chr2L 177816 177860 chr2L 178023 178067 12 202 5.5 6.0 5.8 1.8 251 chr2L 177816 intron spen + chr2L 177942 intron spen + chr2L 178067 intron spen + chr2L_12_175001 chr2L_175001 RAL-406 5 chr2L 263279 263329 chr2L 263445 263484 21 163 2.0 5.5 3.8 4.4 205 chr2L 263279 intron,3` UTR CG3645 -,CG17075 - chr2L 263382 intron,3` UTR CG3645 -,CG17075 - chr2L 263484 intron,3` UTR CG3645 -,CG17075 - chr2L_21_260001 chr2L_260001 RAL-406 6 chr2L 325130 325153 chr2L 325212 325222 5 79 8.0 9.5 8.8 0.5 92 chr2L 325130 intron Plc21C + chr2L 325176 intron Plc21C + chr2L 325222 intron Plc21C + chr2L_5_325001 chr2L_325001 RAL-406 7 chr2L 325884 325904 chr2L 325970 325970 9 82 3.0 5.5 4.2 1.7 86 chr2L 325884 intron,exon Plc21C +,CG43755 - chr2L 325927 intron,exon Plc21C +,CG43755 - chr2L 325970 intron,exon Plc21C +,CG43755 - chr2L_9_325001 chr2L_325001 RAL-406 8 chr2L 325906 325929 chr2L 325967 326005 13 83 4.5 5.0 4.8 2.2 99 chr2L 325906 intron,exon Plc21C +,CG43755 - chr2L 325956 intron,exon Plc21C +,CG43755 - chr2L 326005 intron,exon Plc21C +,CG43755 - chr2L_13_325001 chr2L_325001 RAL-406 9 chr2L 347870 347918 chr2L 355384 355422 blood 12 7514 7.0 7.0 7.0 1.5 7552 chr2L 347870 3` UTR Plc21C + chr2L 351646 intron Plc21C + chr2L 355422 3` UTR Plc21C + chr2L_12_350001 chr2L_350001 RAL-406 10 chr2L 371423 371457 chr2L 371522 371556 13 99 6.5 8.0 7.2 1.6 133 chr2L 371423 intergenic not near genes chr2L 371490 intergenic not near genes chr2L 371556 intergenic not near genes chr2L_13_370001 chr2L_370001 RAL-406 11 chr2L 528471 528511 chr2L 528569 528609 16 97 5.5 6.5 6.0 2.3 138 chr2L 528471 intron ush + chr2L 528540 intron ush + chr2L 528609 intron ush + chr2L_16_525001 chr2L_525001 RAL-406 12 chr2L 676666 676721 chr2L 676763 676772 6 76 4.5 3.5 4.0 1.2 106 chr2L 676666 intron ds - chr2L 676719 intron ds - chr2L 676772 intron ds - chr2L_6_675001 chr2L_675001 RAL-406 13 chr2L 678395 678438 chr2L 678494 678528 12 98 4.5 4.5 4.5 2.2 133 chr2L 678395 intron ds - chr2L 678462 intron ds - chr2L 678528 intron ds - chr2L_12_675001 chr2L_675001 RAL-406 14 chr2L 750028 750048 chr2L 750140 750166 5 119 1.5 3.5 2.5 1.4 138 chr2L 750028 5` UTR GABA-B-R3 + chr2L 750097 5` UTR GABA-B-R3 + chr2L 750166 5` UTR GABA-B-R3 + chr2L_5_750001 chr2L_750001 RAL-406 15 chr2L 764549 764576 chr2L 764670 764686 9 119 5.5 3.0 4.2 1.7 137 chr2L 764549 intergenic not near genes chr2L 764618 intergenic not near genes chr2L 764686 intergenic not near genes chr2L_9_760001 chr2L_760001 RAL-406 16 chr2L 770456 770493 chr2L 772244 772244 Bari1 7 1774 1.0 2.5 1.8 2.5 1788 chr2L 770456 intergenic not near genes chr2L 771350 intergenic not near genes chr2L 772244 intergenic CR44614 + chr2L_7_770001 chr2L_770001 RAL-406 17 chr2L 848614 848642 chr2L 848698 848730 10 89 2.0 3.0 2.5 2.9 116 chr2L 848614 intron drongo - chr2L 848672 intron drongo - chr2L 848730 intron drongo - chr2L_10_845001 chr2L_845001 RAL-406 18 chr2L 922455 922488 chr2L 922556 922589 11 99 7.5 7.5 7.5 1.3 134 chr2L 922455 intergenic CG4341 + chr2L 922522 intergenic CG4341 + chr2L 922589 intergenic CG4341 + chr2L_11_920001 chr2L_920001 RAL-406 19 chr2L 936579 936586 chr2L 936674 936696 4 101 2.5 5.0 3.8 0.8 117 chr2L 936579 intron CG4341 + chr2L 936638 intron CG4341 + chr2L 936696 intron CG4341 + chr2L_4_935001 chr2L_935001 RAL-406 20 chr2L 950302 950342 chr2L 950407 950447 12 99 5.0 5.0 5.0 2.0 145 chr2L 950302 intron CG4341 + chr2L 950374 intron CG4341 + chr2L 950447 intron CG4341 + chr2L_12_950001 chr2L_950001 RAL-406 21 chr2L 976858 976904 chr2L 984513 984540 roo 18 7653 8.5 0.0 4.2 3.5 7682 chr2L 976858 intergenic not near genes chr2L 980699 intergenic not near genes chr2L 984540 intergenic not near genes chr2L_18_980001 chr2L_980001 RAL-406 22 chr2L 996706 996717 chr2L 1005821 1005832 roo 4 9115 3.0 1.5 2.2 1.2 9126 chr2L 996706 intergenic not near genes chr2L 1001269 intergenic not near genes chr2L 1005832 intergenic not near genes chr2L_4_1000001 chr2L_1000001 RAL-406 23 chr2L 1042586 1042599 chr2L 1042696 1042709 10 110 5.0 0.0 2.5 2.9 123 chr2L 1042586 intron IA-2 - chr2L 1042648 intron IA-2 - chr2L 1042709 intron IA-2 - chr2L_10_1040001 chr2L_1040001 RAL-406 24 chr2L 1089957 1089984 chr2L 1090173 1090185 4 212 4.5 6.0 5.2 0.6 228 chr2L 1089957 intron CG4629 - chr2L 1090071 intron CG4629 - chr2L 1090185 intron CG4629 - chr2L_4_1090001 chr2L_1090001 RAL-406 25 chr2L 1089986 1090005 chr2L 1090167 1090188 6 194 3.0 5.5 4.2 1.2 202 chr2L 1089986 intron CG4629 - chr2L 1090087 intron CG4629 - chr2L 1090188 intron CG4629 - chr2L_6_1090001 chr2L_1090001 RAL-406 26 chr2L 1090359 1090367 chr2L 1090469 1090477 4 110 0.5 8.0 4.2 0.8 118 chr2L 1090359 intron CG4629 - chr2L 1090418 intron CG4629 - chr2L 1090477 intron CG4629 - chr2L_4_1090001 chr2L_1090001 RAL-406 27 chr2L 1096404 1096412 chr2L 1096462 1096481 7 89 4.0 3.5 3.8 1.5 77 chr2L 1096404 intron CG4629 - chr2L 1096442 intron CG4629 - chr2L 1096481 intron CG4629 - chr2L_7_1095001 chr2L_1095001 RAL-406 28 chr2L 1156838 1156891 chr2L 1156963 1157011 10 123 3.5 3.0 3.2 2.4 173 chr2L 1156838 intron capt - chr2L 1156924 intron capt - chr2L 1157011 intron capt - chr2L_10_1155001 chr2L_1155001 RAL-406 29 chr2L 1192658 1192696 chr2L 1192781 1192819 8 118 4.0 3.0 3.5 1.8 161 chr2L 1192658 intron CG5001 + chr2L 1192738 intron CG5001 + chr2L 1192819 intron CG5001 + chr2L_8_1190001 chr2L_1190001 RAL-406 30 chr2L 1215289 1215583 chr2L 1215420 1215638 25 87 4.5 4.5 4.5 4.5 349 chr2L 1215289 3` UTR CR45346 - chr2L 1215464 intergenic CR45346 - chr2L 1215638 intergenic CR45346 - chr2L_25_1215001 chr2L_1215001 RAL-406 31 chr2L 1220112 1220160 chr2L 1227598 1227646 blood 29 7481 5.5 3.5 4.5 5.3 7534 chr2L 1220112 intron CG42329 + chr2L 1223879 intron CG42329 + chr2L 1227646 intron CG42329 + chr2L_29_1220001 chr2L_1220001 RAL-406 32 chr2L 1244391 1244435 chr2L 1244488 1244532 15 96 3.0 9.0 6.0 2.1 141 chr2L 1244391 intergenic not near genes chr2L 1244462 intergenic not near genes chr2L 1244532 intergenic not near genes chr2L_15_1240001 chr2L_1240001 RAL-406 33 chr2L 1261211 1261258 chr2L 1261312 1261337 9 97 0.0 0.5 0.2 7.5 126 chr2L 1261211 intron robo3 + chr2L 1261274 intron robo3 + chr2L 1261337 intron robo3 + chr2L_9_1260001 chr2L_1260001 RAL-406 34 chr2L 1333747 1333761 chr2L 1333874 1333901 8 141 0.0 5.0 2.5 2.3 154 chr2L 1333747 intergenic CG5440 + chr2L 1333824 intergenic CG5440 + chr2L 1333901 intergenic CG5440 + chr2L_8_1330001 chr2L_1330001 RAL-406 35 chr2L 1410688 1410737 chr2L 1410796 1410845 13 98 3.5 4.5 4.0 2.6 157 chr2L 1410688 intron lea - chr2L 1410766 intron lea - chr2L 1410845 intron lea - chr2L_13_1410001 chr2L_1410001 RAL-406 36 chr2L 1511957 1512005 chr2L 1512075 1512123 23 118 3.0 8.0 5.5 3.5 166 chr2L 1511957 intergenic not near genes chr2L 1512040 intergenic not near genes chr2L 1512123 intergenic not near genes chr2L_23_1510001 chr2L_1510001 RAL-406 37 chr2L 1536517 1536521 chr2L 1536641 1536668 4 138 0.0 2.0 1.0 2.0 151 chr2L 1536517 intergenic not near genes chr2L 1536592 intergenic not near genes chr2L 1536668 intergenic not near genes chr2L_4_1535001 chr2L_1535001 RAL-406 38 chr2L 1539833 1539880 chr2L 1539946 1539980 25 112 4.0 6.0 5.0 4.2 147 chr2L 1539833 intergenic not near genes chr2L 1539906 intergenic not near genes chr2L 1539980 intergenic not near genes chr2L_25_1535001 chr2L_1535001 RAL-406 39 chr2L 1570673 1570715 chr2L 1573565 1573607 F-element 14 2890 4.0 3.0 3.5 3.1 2934 chr2L 1570673 intron haf + chr2L 1572140 intron haf + chr2L 1573607 intron haf + chr2L_14_1570001 chr2L_1570001 RAL-406 40 chr2L 1615377 1615382 chr2L 1615479 1615484 7 102 0.0 4.5 2.2 2.2 107 chr2L 1615377 intergenic not near genes chr2L 1615430 intergenic not near genes chr2L 1615484 intergenic not near genes chr2L_7_1615001 chr2L_1615001 RAL-406 41 chr2L 1615383 1615414 chr2L 1615475 1615506 10 99 0.0 3.0 1.5 4.0 123 chr2L 1615383 intergenic not near genes chr2L 1615444 intergenic not near genes chr2L 1615506 intergenic not near genes chr2L_10_1615001 chr2L_1615001 RAL-406 42 chr2L 1628814 1628833 chr2L 1629163 1629177 8 346 5.0 6.0 5.5 1.2 363 chr2L 1628814 intergenic not near genes chr2L 1628996 intergenic not near genes chr2L 1629177 intergenic not near genes chr2L_8_1625001 chr2L_1625001 RAL-406 43 chr2L 1634746 1634763 chr2L 1634857 1634865 5 104 2.5 4.0 3.2 1.2 119 chr2L 1634746 intergenic not near genes chr2L 1634806 intergenic not near genes chr2L 1634865 intergenic not near genes chr2L_5_1630001 chr2L_1630001 RAL-406 44 chr2L 1650895 1650918 chr2L 1651015 1651054 8 125 5.0 5.0 5.0 1.3 159 chr2L 1650895 intergenic chinmo + chr2L 1650974 intergenic chinmo + chr2L 1651054 intergenic chinmo + chr2L_8_1650001 chr2L_1650001 RAL-406 45 chr2L 1678955 1679006 chr2L 1686440 1686491 blood 12 7484 6.0 7.0 6.5 1.6 7536 chr2L 1678955 intron chinmo + chr2L 1682723 intron chinmo + chr2L 1686491 intron chinmo + chr2L_12_1680001 chr2L_1680001 RAL-406 46 chr2L 1711340 1711366 chr2L 1711684 1711693 mdg3 6 341 4.0 3.0 3.5 1.3 353 chr2L 1711340 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711516 3` UTR frtz - chr2L 1711693 3` UTR frtz - chr2L_6_1710001 chr2L_1710001 RAL-406 47 chr2L 1711372 1711385 chr2L 1711681 1711713 mdg3 4 326 3.0 3.0 3.0 1.0 341 chr2L 1711372 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711542 3` UTR frtz - chr2L 1711713 3` UTR frtz - chr2L_4_1710001 chr2L_1710001 RAL-406 48 chr2L 1793531 1793567 chr2L 1793635 1793661 10 102 3.5 5.0 4.2 1.9 130 chr2L 1793531 intergenic Gr22a -,Gr22b - chr2L 1793596 intergenic Gr22a -,Gr22b - chr2L 1793661 intergenic Gr22a -,Gr22b - chr2L_10_1790001 chr2L_1790001 RAL-406 49 chr2L 1828385 1828433 chr2L 1828489 1828537 12 101 2.5 3.0 2.8 3.2 152 chr2L 1828385 intergenic not near genes chr2L 1828461 intergenic not near genes chr2L 1828537 intergenic not near genes chr2L_12_1825001 chr2L_1825001 RAL-406 50 chr2L 1844683 1844692 chr2L 1844785 1844788 4 100 6.0 6.5 6.2 0.6 105 chr2L 1844683 exon wry + chr2L 1844736 intron wry + chr2L 1844788 intron wry + chr2L_4_1840001 chr2L_1840001 RAL-406 51 chr2L 1905068 1905109 chr2L 1905191 1905217 16 120 9.5 5.0 7.2 2.0 149 chr2L 1905068 intron CG7337 + chr2L 1905142 intron CG7337 + chr2L 1905217 intron CG7337 + chr2L_16_1905001 chr2L_1905001 RAL-406 52 chr2L 1917207 1917221 chr2L 1917280 1917309 8 92 1.0 6.0 3.5 1.8 102 chr2L 1917207 intron CG7337 + chr2L 1917258 intron CG7337 + chr2L 1917309 intron CG7337 + chr2L_8_1915001 chr2L_1915001 RAL-406 53 chr2L 1925468 1925493 chr2L 1925565 1925584 8 94 2.5 3.5 3.0 2.0 116 chr2L 1925468 intron CG7337 + chr2L 1925526 intron CG7337 + chr2L 1925584 intron CG7337 + chr2L_8_1925001 chr2L_1925001 RAL-406 54 chr2L 1933641 1933680 chr2L 1933742 1933781 5 101 5.5 0.0 2.8 1.3 140 chr2L 1933641 intron CG7337 + chr2L 1933711 intron CG7337 + chr2L 1933781 intron CG7337 + chr2L_5_1930001 chr2L_1930001 RAL-406 55 chr2L 1993216 1993230 chr2L 1993297 1993336 5 86 2.0 9.5 5.8 0.7 120 chr2L 1993216 intergenic not near genes chr2L 1993276 intergenic not near genes chr2L 1993336 intergenic not near genes chr2L_5_1990001 chr2L_1990001 RAL-406 56 chr2L 2013380 2013407 chr2L 2013492 2013523 10 119 4.0 11.0 7.5 1.2 143 chr2L 2013380 intron CG4238 + chr2L 2013452 intron CG4238 + chr2L 2013523 intron CG4238 + chr2L_10_2010001 chr2L_2010001 RAL-406 57 chr2L 2025835 2025885 chr2L 2026117 2026166 9 281 0.0 4.5 2.2 2.8 331 chr2L 2025835 intron CG4238 + chr2L 2026000 intron CG4238 + chr2L 2026166 intron CG4238 + chr2L_9_2025001 chr2L_2025001 RAL-406 58 chr2L 2046312 2046355 chr2L 2046409 2046445 9 85 3.0 1.5 2.2 2.8 133 chr2L 2046312 intron Kebab + chr2L 2046378 intron Kebab + chr2L 2046445 exon Kebab + chr2L_9_2045001 chr2L_2045001 RAL-406 59 chr2L 2046356 2046357 chr2L 2046406 2046414 5 60 3.0 1.5 2.2 1.6 58 chr2L 2046356 intron Kebab + chr2L 2046385 intron Kebab + chr2L 2046414 intron Kebab + chr2L_5_2045001 chr2L_2045001 RAL-406 60 chr2L 2100376 2100404 chr2L 2109527 2109549 roo 8 9155 8.5 5.0 6.8 1.0 9173 chr2L 2100376 intron dpr3 - chr2L 2104962 intron dpr3 - chr2L 2109549 intron dpr3 - chr2L_8_2100001 chr2L_2100001 RAL-406 61 chr2L 2112120 2112141 chr2L 2119777 2119803 opus 5 7660 0.5 2.5 1.5 2.0 7683 chr2L 2112120 intergenic not near genes chr2L 2115962 intergenic not near genes chr2L 2119803 intergenic not near genes chr2L_5_2115001 chr2L_2115001 RAL-406 62 chr2L 2207666 2207686 chr2L 2207746 2207780 8 90 2.5 1.5 2.0 2.7 114 chr2L 2207666 exon CG33124 - chr2L 2207723 exon CG33124 - chr2L 2207780 exon CG33124 - chr2L_8_2205001 chr2L_2205001 RAL-406 63 chr2L 2243099 2243122 chr2L 2243200 2243223 14 100 7.0 4.5 5.8 2.1 124 chr2L 2243099 intron CG4267 + chr2L 2243161 intron CG4267 + chr2L 2243223 intron CG4267 + chr2L_14_2240001 chr2L_2240001 RAL-406 64 chr2L 2243123 2243141 chr2L 2243199 2243242 10 98 4.5 3.5 4.0 2.0 119 chr2L 2243123 intron CG4267 + chr2L 2243182 intron CG4267 + chr2L 2243242 intron CG4267 + chr2L_10_2240001 chr2L_2240001 RAL-406 65 chr2L 2290563 2290614 chr2L 2290659 2290671 4 85 1.5 4.5 3.0 1.0 108 chr2L 2290563 exon robl22E - chr2L 2290617 exon robl22E - chr2L 2290671 intron robl22E - chr2L_4_2290001 chr2L_2290001 RAL-406 66 chr2L 2311057 2311086 chr2L 2311173 2311176 8 112 3.0 1.0 2.0 2.7 119 chr2L 2311057 intron CG9967 - chr2L 2311116 intron CG9967 - chr2L 2311176 intron CG9967 - chr2L_8_2310001 chr2L_2310001 RAL-406 67 chr2L 2317114 2317128 chr2L 2317299 2317319 4 190 38.5 23.0 30.8 0.1 205 chr2L 2317114 intron,intron CG9967 -,eys + chr2L 2317216 intron,intron CG9967 -,eys + chr2L 2317319 intron,intron CG9967 -,eys + chr2L_4_2315001 chr2L_2315001 RAL-406 68 chr2L 2372345 2372363 chr2L 2372450 2372453 8 102 6.0 7.5 6.8 1.0 108 chr2L 2372345 intergenic CG3609 - chr2L 2372399 intergenic CG3609 - chr2L 2372453 intergenic CG3609 - chr2L_8_2370001 chr2L_2370001 RAL-406 69 chr2L 2427371 2427396 chr2L 2427477 2427502 15 105 5.0 1.0 3.0 3.8 131 chr2L 2427371 3` UTR CR44912 - chr2L 2427436 3` UTR CR44912 - chr2L 2427502 3` UTR CR44912 - chr2L_15_2425001 chr2L_2425001 RAL-406 70 chr2L 2541430 2541444 chr2L 2541533 2541547 6 103 19.5 1.5 10.5 0.5 117 chr2L 2541430 intergenic not near genes chr2L 2541488 intergenic not near genes chr2L 2541547 intergenic not near genes chr2L_6_2540001 chr2L_2540001 RAL-406 71 chr2L 2541447 2541478 chr2L 2541532 2541566 8 87 8.0 1.5 4.8 1.4 119 chr2L 2541447 intergenic not near genes chr2L 2541506 intergenic not near genes chr2L 2541566 intergenic not near genes chr2L_8_2540001 chr2L_2540001 RAL-406 72 chr2L 2544539 2544556 chr2L 2544646 2544675 10 117 0.5 8.5 4.5 1.8 136 chr2L 2544539 intergenic not near genes chr2L 2544607 intergenic not near genes chr2L 2544675 intergenic not near genes chr2L_10_2540001 chr2L_2540001 RAL-406 73 chr2L 2552721 2552768 chr2L 2552821 2552868 19 100 2.5 5.5 4.0 3.8 147 chr2L 2552721 exon CG3515 - chr2L 2552794 5` UTR CG3515 - chr2L 2552868 intergenic CG3515 - chr2L_19_2550001 chr2L_2550001 RAL-406 74 chr2L 2565520 2565567 chr2L 2571608 2571645 297 14 6085 3.5 5.5 4.5 2.5 6125 chr2L 2565520 exon Cyp309a2 - chr2L 2568582 intron Cyp309a2 - chr2L 2571645 intron Cyp309a2 - chr2L_14_2565001 chr2L_2565001 RAL-406 75 chr2L 2596061 2596093 chr2L 2596492 2596527 6 436 4.5 7.5 6.0 0.9 466 chr2L 2596061 intergenic not near genes chr2L 2596294 intergenic not near genes chr2L 2596527 intergenic not near genes chr2L_6_2595001 chr2L_2595001 RAL-406 76 chr2L 2653861 2653869 chr2L 2653965 2653973 8 103 16.5 0.0 8.2 0.9 112 chr2L 2653861 3` UTR Prosbeta4R1 + chr2L 2653917 3` UTR Prosbeta4R1 + chr2L 2653973 intergenic Prosbeta4R1 +,Or23a + chr2L_8_2650001 chr2L_2650001 RAL-406 77 chr2L 2653060 2653070 chr2L 2654668 2654709 7 1622 41.0 40.0 40.5 0.2 1649 chr2L 2653060 5` UTR Prosbeta4R1 + chr2L 2653884 3` UTR Prosbeta4R1 + chr2L 2654709 exon Or23a + chr2L_7_2650001 chr2L_2650001 RAL-406 78 chr2L 2661222 2661236 chr2L 2663031 2663049 I-element 4 1821 1.5 0.0 0.8 2.2 1827 chr2L 2661222 intergenic not near genes chr2L 2662136 intergenic not near genes chr2L 2663049 intergenic not near genes chr2L_4_2660001 chr2L_2660001 RAL-406 79 chr2L 2667604 2667658 chr2L 2667703 2667756 18 90 3.5 5.0 4.2 3.5 152 chr2L 2667604 intergenic not near genes chr2L 2667680 intergenic not near genes chr2L 2667756 intergenic not near genes chr2L_18_2665001 chr2L_2665001 RAL-406 80 chr2L 2692317 2692361 chr2L 2692409 2692426 13 93 3.5 1.5 2.5 3.7 109 chr2L 2692317 intron CG31690 + chr2L 2692372 intron CG31690 + chr2L 2692426 intron CG31690 + chr2L_13_2690001 chr2L_2690001 RAL-406 81 chr2L 2703215 2703442 chr2L 2703311 2703546 22 96 4.5 7.5 6.0 3.1 331 chr2L 2703215 intron CG31690 + chr2L 2703380 intron CG31690 + chr2L 2703546 intron CG31690 + chr2L_22_2700001 chr2L_2700001 RAL-406 82 chr2L 2734490 2734532 chr2L 2734584 2734629 14 94 3.5 0.5 2.0 4.7 139 chr2L 2734490 intron CG31689 + chr2L 2734560 intron CG31689 + chr2L 2734629 intron CG31689 + chr2L_14_2730001 chr2L_2730001 RAL-406 83 chr2L 2772595 2772624 chr2L 2779194 2779226 297 11 6599 3.5 5.5 4.5 2.0 6631 chr2L 2772595 3` UTR Syt1 - chr2L 2775910 intron Syt1 - chr2L 2779226 3` UTR Syt1 - chr2L_11_2775001 chr2L_2775001 RAL-406 84 chr2L 2800589 2800619 chr2L 2800692 2800696 6 97 2.0 0.0 1.0 3.0 107 chr2L 2800589 intergenic not near genes chr2L 2800642 intergenic not near genes chr2L 2800696 intergenic not near genes chr2L_6_2800001 chr2L_2800001 RAL-406 85 chr2L 2826530 2826569 chr2L 2826632 2826652 8 104 0.5 3.5 2.0 2.7 122 chr2L 2826530 intron Duox - chr2L 2826591 intron Duox - chr2L 2826652 intron Duox - chr2L_8_2825001 chr2L_2825001 RAL-406 86 chr2L 2826570 2826575 chr2L 2826629 2826680 6 96 0.5 3.5 2.0 2.0 110 chr2L 2826570 intron Duox - chr2L 2826625 intron Duox - chr2L 2826680 intron Duox - chr2L_6_2825001 chr2L_2825001 RAL-406 87 chr2L 2836723 2836740 chr2L 2836822 2836839 6 98 8.5 2.5 5.5 0.9 116 chr2L 2836723 intron CG3119 - chr2L 2836781 intron CG3119 - chr2L 2836839 intron CG3119 - chr2L_6_2835001 chr2L_2835001 RAL-406 88 chr2L 2937397 2937446 chr2L 2937494 2937513 17 91 4.0 3.0 3.5 3.8 116 chr2L 2937397 intron lilli + chr2L 2937455 intron lilli + chr2L 2937513 intron lilli + chr2L_17_2935001 chr2L_2935001 RAL-406 89 chr2L 3072991 3073025 chr2L 3078234 3078268 copia 14 5240 3.0 2.0 2.5 4.0 5277 chr2L 3072991 intron toc - chr2L 3075630 intron toc - chr2L 3078268 intron toc - chr2L_14_3075001 chr2L_3075001 RAL-406 90 chr2L 3108848 3108897 chr2L 3108945 3108994 17 96 3.5 6.5 5.0 2.8 146 chr2L 3108848 exon toc - chr2L 3108921 intron toc - chr2L 3108994 intron toc - chr2L_17_3105001 chr2L_3105001 RAL-406 91 chr2L 3112357 3112400 chr2L 3112454 3112496 14 98 6.5 2.0 4.2 2.7 139 chr2L 3112357 intron toc - chr2L 3112426 intron toc - chr2L 3112496 intron toc - chr2L_14_3110001 chr2L_3110001 RAL-406 92 chr2L 3134277 3134289 chr2L 3134373 3134380 7 95 6.5 7.5 7.0 0.9 103 chr2L 3134277 intron toc - chr2L 3134328 intron toc - chr2L 3134380 intron toc - chr2L_7_3130001 chr2L_3130001 RAL-406 93 chr2L 3189768 3189792 chr2L 3189867 3189897 14 104 1.5 5.0 3.2 3.3 129 chr2L 3189768 intron CG34393 - chr2L 3189832 intron CG34393 - chr2L 3189897 intron CG34393 - chr2L_14_3185001 chr2L_3185001 RAL-406 94 chr2L 3192191 3192242 chr2L 3192322 3192373 22 126 4.0 7.0 5.5 3.4 182 chr2L 3192191 exon CG34393 - chr2L 3192282 intron CG34393 - chr2L 3192373 intron CG34393 - chr2L_22_3190001 chr2L_3190001 RAL-406 95 chr2L 3202719 3202770 chr2L 3210168 3210219 mdg1 18 7447 2.5 0.5 1.5 7.2 7500 chr2L 3202719 intergenic not near genes chr2L 3206469 intergenic not near genes chr2L 3210219 intergenic CR45336 + chr2L_18_3205001 chr2L_3205001 RAL-406 96 chr2L 3233619 3233660 chr2L 3233790 3233825 16 168 4.0 4.0 4.0 3.2 206 chr2L 3233619 intergenic not near genes chr2L 3233722 intergenic not near genes chr2L 3233825 intergenic not near genes chr2L_16_3230001 chr2L_3230001 RAL-406 97 chr2L 3236705 3236741 chr2L 3236810 3236831 9 96 6.0 2.5 4.2 1.7 126 chr2L 3236705 intergenic not near genes chr2L 3236768 intergenic not near genes chr2L 3236831 intergenic not near genes chr2L_9_3235001 chr2L_3235001 RAL-406 98 chr2L 3251475 3251499 chr2L 3259060 3259084 springer 9 7584 11.5 7.0 9.2 0.9 7609 chr2L 3251475 intergenic not near genes chr2L 3255280 intergenic not near genes chr2L 3259084 intergenic not near genes chr2L_9_3255001 chr2L_3255001 RAL-406 99 chr2L 3251501 3251523 chr2L 3259059 3259108 springer 16 7578 6.0 7.0 6.5 2.1 7607 chr2L 3251501 intergenic not near genes chr2L 3255304 intergenic not near genes chr2L 3259108 intergenic not near genes chr2L_16_3255001 chr2L_3255001 RAL-406 100 chr2L 3267591 3267601 chr2L 3267702 3267711 5 111 6.5 7.0 6.8 0.6 120 chr2L 3267591 intergenic not near genes chr2L 3267651 intergenic not near genes chr2L 3267711 intergenic not near genes chr2L_5_3265001 chr2L_3265001 RAL-406 101 chr2L 3272950 3272968 chr2L 3273046 3273064 11 95 1.5 11.5 6.5 1.5 114 chr2L 3272950 intergenic not near genes chr2L 3273007 intergenic not near genes chr2L 3273064 intergenic not near genes chr2L_11_3270001 chr2L_3270001 RAL-406 102 chr2L 3291217 3291268 chr2L 3291317 3291333 12 92 4.0 5.0 4.5 2.2 116 chr2L 3291217 intergenic CG9664 - chr2L 3291275 3` UTR CG9664 - chr2L 3291333 3` UTR CG9664 - chr2L_12_3290001 chr2L_3290001 RAL-406 103 chr2L 3366994 3367042 chr2L 3367164 3367211 14 169 9.0 3.0 6.0 2.0 217 chr2L 3366994 intron CG34394 - chr2L 3367102 intron CG34394 - chr2L 3367211 intron CG34394 - chr2L_14_3365001 chr2L_3365001 RAL-406 104 chr2L 3388578 3388631 chr2L 3388839 3388862 pogo 26 254 3.5 7.5 5.5 4.0 284 chr2L 3388578 intergenic CG42460 - chr2L 3388720 intergenic CG42460 - chr2L 3388862 intergenic CG42460 -,CR44791 + chr2L_26_3385001 chr2L_3385001 RAL-406 105 chr2L 3392360 3392387 chr2L 3392548 3392575 9 188 10.0 2.5 6.2 1.2 215 chr2L 3392360 intergenic not near genes chr2L 3392468 intergenic not near genes chr2L 3392575 intergenic not near genes chr2L_9_3390001 chr2L_3390001 RAL-406 106 chr2L 3392394 3392406 chr2L 3392546 3392584 6 173 6.0 2.5 4.2 1.2 190 chr2L 3392394 intergenic not near genes chr2L 3392489 intergenic not near genes chr2L 3392584 intergenic not near genes chr2L_6_3390001 chr2L_3390001 RAL-406 107 chr2L 3425497 3425510 chr2L 3425586 3425601 6 90 1.5 11.5 6.5 0.8 104 chr2L 3425497 intron pgant2 - chr2L 3425549 intron pgant2 - chr2L 3425601 intron pgant2 - chr2L_6_3425001 chr2L_3425001 RAL-406 108 chr2L 3426387 3426441 chr2L 3426520 3426559 22 129 4.0 3.5 3.8 4.6 172 chr2L 3426387 intron pgant2 - chr2L 3426473 intron pgant2 - chr2L 3426559 5` UTR pgant2 - chr2L_22_3425001 chr2L_3425001 RAL-406 109 chr2L 3498699 3498744 chr2L 3498796 3498821 11 91 4.0 8.0 6.0 1.6 122 chr2L 3498699 intron tim - chr2L 3498760 intron tim - chr2L 3498821 intron tim - chr2L_11_3495001 chr2L_3495001 RAL-406 110 chr2L 3510379 3510405 chr2L 3510481 3510507 11 101 7.5 8.0 7.8 1.2 128 chr2L 3510379 3` UTR CG33123 - chr2L 3510443 3` UTR CG33123 - chr2L 3510507 3` UTR CG33123 - chr2L_11_3510001 chr2L_3510001 RAL-406 111 chr2L 3510407 3510414 chr2L 3510479 3510516 6 97 5.5 7.0 6.2 0.8 109 chr2L 3510407 3` UTR CG33123 - chr2L 3510462 3` UTR CG33123 - chr2L 3510516 3` UTR CG33123 - chr2L_6_3510001 chr2L_3510001 RAL-406 112 chr2L 3649772 3649816 chr2L 3654990 3655039 copia 17 5217 4.0 2.5 3.2 4.0 5267 chr2L 3649772 intron for - chr2L 3652406 intron for - chr2L 3655039 intron for - chr2L_17_3650001 chr2L_3650001 RAL-406 113 chr2L 3663289 3663334 chr2L 3663387 3663413 19 95 6.0 3.0 4.5 3.5 124 chr2L 3663289 5` UTR CG34340 + chr2L 3663351 intron CG34340 + chr2L 3663413 intron CG34340 + chr2L_19_3660001 chr2L_3660001 RAL-406 114 chr2L 3667949 3668062 chr2L 3668050 3668108 14 98 0.0 0.0 0.0 14.0 159 chr2L 3667949 intron CG34340 + chr2L 3668028 intron,3` UTR CG34340 +,Sfp24Ba - chr2L 3668108 intron,3` UTR CG34340 +,Sfp24Ba - chr2L_14_3665001 chr2L_3665001 RAL-406 115 chr2L 3690081 3690110 chr2L 3690189 3690212 8 107 9.0 1.5 5.2 1.3 131 chr2L 3690081 intron CG34340 + chr2L 3690146 intron CG34340 + chr2L 3690212 intron CG34340 + chr2L_8_3690001 chr2L_3690001 RAL-406 116 chr2L 3735809 3735827 chr2L 3736037 3736055 8 228 6.5 5.0 5.8 1.2 246 chr2L 3735809 intron CG10019 + chr2L 3735932 intron CG10019 + chr2L 3736055 intron CG10019 + chr2L_8_3735001 chr2L_3735001 RAL-406 117 chr2L 3735829 3735844 chr2L 3736036 3736072 10 222 2.0 5.0 3.5 2.2 243 chr2L 3735829 intron CG10019 + chr2L 3735950 intron CG10019 + chr2L 3736072 intron CG10019 + chr2L_10_3735001 chr2L_3735001 RAL-406 118 chr2L 3784784 3784813 chr2L 3785663 3785682 8 878 30.5 7.5 19.0 0.4 898 chr2L 3784784 intergenic CG31960 + chr2L 3785233 exon CG31960 + chr2L 3785682 intergenic CG31958 +,CG31960 + chr2L_8_3785001 chr2L_3785001 RAL-406 119 chr2L 3792478 3792491 chr2L 3792579 3792602 6 109 3.5 3.0 3.2 1.4 124 chr2L 3792478 intron CG3921 + chr2L 3792540 intron CG3921 + chr2L 3792602 exon CG3921 + chr2L_6_3790001 chr2L_3790001 RAL-406 120 chr2L 3819606 3819630 chr2L 3819702 3819709 8 93 4.0 3.0 3.5 1.8 103 chr2L 3819606 intergenic not near genes chr2L 3819658 intergenic not near genes chr2L 3819709 intergenic not near genes chr2L_8_3815001 chr2L_3815001 RAL-406 121 chr2L 3883789 3883800 chr2L 3883886 3883897 7 97 5.0 0.0 2.5 2.0 108 chr2L 3883789 intron capu - chr2L 3883843 intron capu - chr2L 3883897 intron capu - chr2L_7_3880001 chr2L_3880001 RAL-406 122 chr2L 3915319 3915321 chr2L 3915475 3915477 4 156 1.0 5.0 3.0 1.0 158 chr2L 3915319 intron fred - chr2L 3915398 intron fred - chr2L 3915477 intron fred - chr2L_4_3915001 chr2L_3915001 RAL-406 123 chr2L 3936638 3936652 chr2L 3936738 3936752 4 100 10.5 4.0 7.2 0.5 114 chr2L 3936638 intron fred - chr2L 3936695 intron fred - chr2L 3936752 intron fred - chr2L_4_3935001 chr2L_3935001 RAL-406 124 chr2L 3943774 3943821 chr2L 3943884 3943932 21 110 8.0 8.5 8.2 2.3 158 chr2L 3943774 intron fred - chr2L 3943853 intron fred - chr2L 3943932 intron fred - chr2L_21_3940001 chr2L_3940001 RAL-406 125 chr2L 3981841 3981854 chr2L 3981945 3981975 4 121 0.5 0.5 0.5 2.7 134 chr2L 3981841 intron fred - chr2L 3981908 intron fred - chr2L 3981975 intron fred - chr2L_4_3980001 chr2L_3980001 RAL-406 126 chr2L 3985967 3985984 chr2L 3986065 3986082 9 98 2.5 2.0 2.2 2.8 115 chr2L 3985967 intron fred - chr2L 3986024 intron fred - chr2L 3986082 intron fred - chr2L_9_3985001 chr2L_3985001 RAL-406 127 chr2L 4001639 4001687 chr2L 4001757 4001805 12 117 3.5 4.5 4.0 2.4 166 chr2L 4001639 intergenic CR45344 + chr2L 4001722 intergenic CR45344 + chr2L 4001805 intergenic CR45344 + chr2L_12_4000001 chr2L_4000001 RAL-406 128 chr2L 4037783 4037809 chr2L 4037889 4037916 11 107 5.5 6.5 6.0 1.6 133 chr2L 4037783 intron ed + chr2L 4037850 intron ed + chr2L 4037916 intron ed + chr2L_11_4035001 chr2L_4035001 RAL-406 129 chr2L 4060162 4060198 chr2L 4060251 4060288 12 93 2.0 3.0 2.5 3.4 126 chr2L 4060162 intron ed + chr2L 4060225 intron ed + chr2L 4060288 intron ed + chr2L_12_4060001 chr2L_4060001 RAL-406 130 chr2L 4066022 4066062 chr2L 4068867 4068907 Juan 8 2844 1.5 7.5 4.5 1.5 2885 chr2L 4066022 intron ed + chr2L 4067464 intron ed + chr2L 4068907 intron ed + chr2L_8_4065001 chr2L_4065001 RAL-406 131 chr2L 4119952 4119972 chr2L 4120058 4120079 7 105 3.0 4.0 3.5 1.6 127 chr2L 4119952 intergenic Sr-CIII + chr2L 4120016 intergenic Sr-CIII + chr2L 4120079 intergenic Sr-CIII + chr2L_7_4120001 chr2L_4120001 RAL-406 132 chr2L 4124256 4124361 chr2L 4124356 4124474 16 121 0.0 0.0 0.0 16.0 218 chr2L 4124256 intergenic Sr-CI + chr2L 4124365 intergenic Sr-CI + chr2L 4124474 intergenic Sr-CI + chr2L_16_4120001 chr2L_4120001 RAL-406 133 chr2L 4131038 4131088 chr2L 4131457 4131507 11 415 5.0 4.5 4.8 1.9 469 chr2L 4131038 intergenic not near genes chr2L 4131272 intergenic not near genes chr2L 4131507 intergenic not near genes chr2L_11_4130001 chr2L_4130001 RAL-406 134 chr2L 4166361 4166364 chr2L 4166464 4166467 4 103 9.5 4.0 6.8 0.5 106 chr2L 4166361 intergenic Or24a - chr2L 4166414 intergenic Or24a - chr2L 4166467 intergenic Or24a - chr2L_4_4165001 chr2L_4165001 RAL-406 135 chr2L 4166365 4166411 chr2L 4166462 4166514 14 100 4.5 3.5 4.0 2.8 149 chr2L 4166365 intergenic Or24a - chr2L 4166440 intergenic Or24a - chr2L 4166514 intergenic Or24a - chr2L_14_4165001 chr2L_4165001 RAL-406 136 chr2L 4170921 4170956 chr2L 4171109 4171145 12 185 2.5 5.0 3.8 2.5 224 chr2L 4170921 intergenic not near genes chr2L 4171033 intergenic not near genes chr2L 4171145 intergenic not near genes chr2L_12_4170001 chr2L_4170001 RAL-406 137 chr2L 4180107 4180132 chr2L 4180203 4180228 9 96 3.0 1.0 2.0 3.0 121 chr2L 4180107 intergenic not near genes chr2L 4180168 intergenic not near genes chr2L 4180228 intergenic not near genes chr2L_9_4180001 chr2L_4180001 RAL-406 138 chr2L 4184453 4184507 chr2L 4184792 4184846 14 334 0.0 7.5 3.8 2.9 393 chr2L 4184453 intergenic not near genes chr2L 4184650 intergenic not near genes chr2L 4184846 intergenic not near genes chr2L_14_4180001 chr2L_4180001 RAL-406 139 chr2L 4218321 4218349 chr2L 4218419 4218447 7 96 3.5 4.5 4.0 1.4 126 chr2L 4218321 intron ft - chr2L 4218384 intron ft - chr2L 4218447 intron ft - chr2L_7_4215001 chr2L_4215001 RAL-406 140 chr2L 4317878 4317911 chr2L 4317962 4318009 11 96 6.5 4.5 5.5 1.7 131 chr2L 4317878 intron tutl + chr2L 4317944 intron tutl + chr2L 4318009 intron tutl + chr2L_11_4315001 chr2L_4315001 RAL-406 141 chr2L 4325621 4325629 chr2L 4325830 4325838 4 209 6.5 3.0 4.8 0.7 217 chr2L 4325621 intron CG16857 + chr2L 4325730 intron CG16857 + chr2L 4325838 intron CG16857 + chr2L_4_4325001 chr2L_4325001 RAL-406 142 chr2L 4340697 4340743 chr2L 4340800 4340835 8 94 4.0 4.0 4.0 1.6 138 chr2L 4340697 intron Atet + chr2L 4340766 intron Atet + chr2L 4340835 intron Atet + chr2L_8_4340001 chr2L_4340001 RAL-406 143 chr2L 4345471 4345518 chr2L 4345569 4345616 6 89 6.5 2.5 4.5 1.1 145 chr2L 4345471 3` UTR Atet + chr2L 4345544 3` UTR Atet + chr2L 4345616 3` UTR Atet + chr2L_6_4345001 chr2L_4345001 RAL-406 144 chr2L 4438987 4439015 chr2L 4439093 4439121 10 106 7.5 2.5 5.0 1.7 134 chr2L 4438987 intron CG15431 - chr2L 4439054 intron CG15431 - chr2L 4439121 5` UTR CG15431 - chr2L_10_4435001 chr2L_4435001 RAL-406 145 chr2L 4439021 4439032 chr2L 4439088 4439122 4 85 3.5 2.0 2.8 1.1 101 chr2L 4439021 intron CG15431 - chr2L 4439072 intron CG15431 - chr2L 4439122 5` UTR CG15431 - chr2L_4_4435001 chr2L_4435001 RAL-406 146 chr2L 4477133 4477179 chr2L 4477320 4477352 14 180 28.5 23.0 25.8 0.5 219 chr2L 4477133 intergenic ine -,dp - chr2L 4477242 intergenic dp -,ine - chr2L 4477352 intergenic dp -,ine - chr2L_14_4475001 chr2L_4475001 RAL-406 147 chr2L 4487232 4487271 chr2L 4487347 4487391 8 117 8.0 5.5 6.8 1.0 159 chr2L 4487232 intron dp - chr2L 4487312 intron dp - chr2L 4487391 intron dp - chr2L_8_4485001 chr2L_4485001 RAL-406 148 chr2L 4595843 4595894 chr2L 4595953 4596004 15 109 2.0 0.5 1.2 6.8 161 chr2L 4595843 intron dp - chr2L 4595924 intron dp - chr2L 4596004 intron dp - chr2L_15_4595001 chr2L_4595001 RAL-406 149 chr2L 4601686 4601730 chr2L 4609147 4609187 mdg1 12 7457 5.0 4.0 4.5 2.2 7501 chr2L 4601686 intron dp - chr2L 4605436 intron dp - chr2L 4609187 intron dp - chr2L_12_4605001 chr2L_4605001 RAL-406 150 chr2L 4613706 4613742 chr2L 4613806 4613852 19 108 5.0 7.5 6.2 2.6 146 chr2L 4613706 intron dp - chr2L 4613779 intron dp - chr2L 4613852 intron dp - chr2L_19_4610001 chr2L_4610001 RAL-406 151 chr2L 4627498 4627548 chr2L 4627597 4627647 15 95 6.0 3.0 4.5 2.7 149 chr2L 4627498 intergenic not near genes chr2L 4627572 intergenic not near genes chr2L 4627647 intergenic not near genes chr2L_15_4625001 chr2L_4625001 RAL-406 152 chr2L 4658460 4658509 chr2L 4658564 4658573 6 84 1.0 2.0 1.5 2.4 113 chr2L 4658460 intergenic not near genes chr2L 4658516 intergenic not near genes chr2L 4658573 intergenic not near genes chr2L_6_4655001 chr2L_4655001 RAL-406 153 chr2L 4661824 4661844 chr2L 4669424 4669444 opus 8 7599 5.5 5.5 5.5 1.2 7620 chr2L 4661824 intergenic not near genes chr2L 4665634 intergenic not near genes chr2L 4669444 intergenic not near genes chr2L_8_4665001 chr2L_4665001 RAL-406 154 chr2L 4703048 4703094 chr2L 4703152 4703152 17 90 5.5 3.5 4.5 3.1 104 chr2L 4703048 intron CG34351 + chr2L 4703100 intron CG34351 + chr2L 4703152 intron CG34351 + chr2L_17_4700001 chr2L_4700001 RAL-406 155 chr2L 4742303 4742317 chr2L 4742401 4742405 4 96 12.5 6.0 9.2 0.4 102 chr2L 4742303 intron CG15630 - chr2L 4742354 intron CG15630 - chr2L 4742405 intron CG15630 - chr2L_4_4740001 chr2L_4740001 RAL-406 156 chr2L 4809647 4809696 chr2L 4809745 4809794 14 98 2.0 4.5 3.2 3.3 147 chr2L 4809647 intergenic not near genes chr2L 4809720 intergenic not near genes chr2L 4809794 intergenic not near genes chr2L_14_4805001 chr2L_4805001 RAL-406 157 chr2L 4858455 4858480 chr2L 4858554 4858599 12 114 5.0 7.5 6.2 1.7 144 chr2L 4858455 intron pog + chr2L 4858527 intron pog + chr2L 4858599 intron pog + chr2L_12_4855001 chr2L_4855001 RAL-406 158 chr2L 4923245 4923250 chr2L 4923346 4923351 6 108 0.0 5.0 2.5 1.7 106 chr2L 4923245 intron hoe1 - chr2L 4923298 intron hoe1 - chr2L 4923351 intron hoe1 - chr2L_6_4920001 chr2L_4920001 RAL-406 159 chr2L 4953498 4953541 chr2L 4953759 4953790 pogo 15 258 1.5 7.5 4.5 2.7 292 chr2L 4953498 intergenic Jon25Bii - chr2L 4953644 intergenic not near genes chr2L 4953790 intergenic Jon25Bi - chr2L_15_4950001 chr2L_4950001 RAL-406 160 chr2L 4996070 4996117 chr2L 4996167 4996214 26 95 6.0 5.5 5.8 3.8 144 chr2L 4996070 intron Rtnl1 - chr2L 4996142 intron Rtnl1 - chr2L 4996214 intron Rtnl1 - chr2L_26_4995001 chr2L_4995001 RAL-406 161 chr2L 4998097 4998141 chr2L 4998230 4998274 10 124 5.0 7.0 6.0 1.4 177 chr2L 4998097 intron Rtnl1 - chr2L 4998186 intron Rtnl1 - chr2L 4998274 intron Rtnl1 - chr2L_10_4995001 chr2L_4995001 RAL-406 162 chr2L 5021713 5021729 chr2L 5021794 5021819 4 88 5.0 2.0 3.5 0.9 106 chr2L 5021713 intron vkg - chr2L 5021766 intron vkg - chr2L 5021819 intron vkg - chr2L_4_5020001 chr2L_5020001 RAL-406 163 chr2L 5037987 5038010 chr2L 5038090 5038113 7 103 6.5 10.0 8.2 0.8 126 chr2L 5037987 5` UTR,5` UTR CG14042 +,SP555 + chr2L 5038050 5` UTR,5` UTR CG14042 +,SP555 + chr2L 5038113 5` UTR,5` UTR CG14042 +,SP555 + chr2L_7_5035001 chr2L_5035001 RAL-406 164 chr2L 5092425 5092444 chr2L 5092532 5092551 10 107 0.0 14.0 7.0 1.2 126 chr2L 5092425 intron pgant5 - chr2L 5092488 intron pgant5 - chr2L 5092551 intron pgant5 - chr2L_10_5090001 chr2L_5090001 RAL-406 165 chr2L 5149287 5149329 chr2L 5149396 5149406 7 93 2.5 6.5 4.5 1.3 119 chr2L 5149287 intron Msp300 + chr2L 5149346 intron Msp300 + chr2L 5149406 intron Msp300 + chr2L_7_5145001 chr2L_5145001 RAL-406 166 chr2L 5198503 5198527 chr2L 5198696 5198703 4 202 0.5 6.5 3.5 0.9 200 chr2L 5198503 intron Msp300 + chr2L 5198603 intron Msp300 + chr2L 5198703 intron Msp300 + chr2L_4_5195001 chr2L_5195001 RAL-406 167 chr2L 5237924 5237939 chr2L 5237995 5238049 4 95 4.5 4.0 4.2 0.8 125 chr2L 5237924 intron tkv - chr2L 5237986 intron tkv - chr2L 5238049 intron tkv - chr2L_4_5235001 chr2L_5235001 RAL-406 168 chr2L 5263729 5263741 chr2L 5263821 5263843 10 100 2.0 10.5 6.2 1.4 114 chr2L 5263729 intron tkv - chr2L 5263786 intron tkv - chr2L 5263843 intron tkv - chr2L_10_5260001 chr2L_5260001 RAL-406 169 chr2L 5276699 5276734 chr2L 5276803 5276838 10 102 2.0 3.5 2.8 2.6 139 chr2L 5276699 exon Bsg25D - chr2L 5276768 intron Bsg25D - chr2L 5276838 intron Bsg25D - chr2L_10_5275001 chr2L_5275001 RAL-406 170 chr2L 5337012 5337020 chr2L 5341084 5341124 4 4083 36.0 1.0 18.5 0.2 4112 chr2L 5337012 intron fusl - chr2L 5339068 intergenic CG12512 - chr2L 5341124 intron CG12512 - chr2L_4_5335001 chr2L_5335001 RAL-406 171 chr2L 5342794 5342803 chr2L 5345159 5345168 Doc 6 2365 3.0 6.5 4.8 1.0 2374 chr2L 5342794 intergenic not near genes chr2L 5343981 intergenic not near genes chr2L 5345168 intergenic not near genes chr2L_6_5340001 chr2L_5340001 RAL-406 172 chr2L 5345418 5345456 chr2L 5345514 5345530 9 90 7.0 2.5 4.8 1.6 112 chr2L 5345418 intergenic not near genes chr2L 5345474 intergenic not near genes chr2L 5345530 intergenic not near genes chr2L_9_5345001 chr2L_5345001 RAL-406 173 chr2L 5378411 5378453 chr2L 5378510 5378552 15 99 2.5 3.5 3.0 3.8 141 chr2L 5378411 intergenic not near genes chr2L 5378482 intergenic not near genes chr2L 5378552 intergenic not near genes chr2L_15_5375001 chr2L_5375001 RAL-406 174 chr2L 5475130 5475164 chr2L 5475254 5475280 8 123 3.0 3.5 3.2 1.9 150 chr2L 5475130 intergenic not near genes chr2L 5475205 intergenic not near genes chr2L 5475280 intergenic not near genes chr2L_8_5475001 chr2L_5475001 RAL-406 175 chr2L 5485038 5485054 chr2L 5485138 5485148 8 97 10.5 2.0 6.2 1.1 110 chr2L 5485038 intergenic not near genes chr2L 5485093 intergenic not near genes chr2L 5485148 intergenic not near genes chr2L_8_5485001 chr2L_5485001 RAL-406 176 chr2L 5486277 5486286 chr2L 5486385 5486395 5 108 0.0 1.5 0.8 2.8 118 chr2L 5486277 intergenic not near genes chr2L 5486336 intergenic not near genes chr2L 5486395 intergenic not near genes chr2L_5_5485001 chr2L_5485001 RAL-406 177 chr2L 5500039 5500047 chr2L 5500145 5500153 7 106 6.5 4.5 5.5 1.1 114 chr2L 5500039 intergenic not near genes chr2L 5500096 intergenic not near genes chr2L 5500153 intergenic not near genes chr2L_7_5500001 chr2L_5500001 RAL-406 178 chr2L 5500048 5500069 chr2L 5500143 5500155 13 101 6.5 4.5 5.5 2.0 107 chr2L 5500048 intergenic not near genes chr2L 5500102 intergenic not near genes chr2L 5500155 intergenic not near genes chr2L_13_5500001 chr2L_5500001 RAL-406 179 chr2L 5582318 5582346 chr2L 5582417 5582456 18 108 9.5 9.5 9.5 1.7 138 chr2L 5582318 intergenic not near genes chr2L 5582387 intergenic not near genes chr2L 5582456 intergenic not near genes chr2L_18_5580001 chr2L_5580001 RAL-406 180 chr2L 5594306 5594359 chr2L 5594418 5594466 9 106 2.0 0.0 1.0 4.5 160 chr2L 5594306 intergenic not near genes chr2L 5594386 intergenic not near genes chr2L 5594466 intergenic not near genes chr2L_9_5590001 chr2L_5590001 RAL-406 181 chr2L 5666287 5666321 chr2L 5666383 5666431 5 104 10.5 1.5 6.0 0.7 144 chr2L 5666287 intron Hsp60C + chr2L 5666359 intron Hsp60C + chr2L 5666431 intron Hsp60C + chr2L_5_5665001 chr2L_5665001 RAL-406 182 chr2L 5709037 5709083 chr2L 5709216 5709262 29 176 2.5 1.5 2.0 9.7 225 chr2L 5709037 intron CG7236 + chr2L 5709150 intron CG7236 + chr2L 5709262 intron CG7236 + chr2L_29_5705001 chr2L_5705001 RAL-406 183 chr2L 5784929 5784971 chr2L 5785032 5785074 22 100 6.5 4.5 5.5 3.4 145 chr2L 5784929 intron CG9171 - chr2L 5785002 intron CG9171 - chr2L 5785074 intron CG9171 - chr2L_22_5785001 chr2L_5785001 RAL-406 184 chr2L 5790012 5790055 chr2L 5790110 5790153 20 96 2.5 6.0 4.2 3.8 141 chr2L 5790012 intron CG9171 - chr2L 5790082 intron CG9171 - chr2L 5790153 intron CG9171 - chr2L_20_5790001 chr2L_5790001 RAL-406 185 chr2L 5827703 5827740 chr2L 5836715 5836768 roo 14 9016 4.0 5.0 4.5 2.5 9065 chr2L 5827703 intron TrissinR + chr2L 5832236 intron TrissinR + chr2L 5836768 intron TrissinR + chr2L_14_5830001 chr2L_5830001 RAL-406 186 chr2L 5842286 5842317 chr2L 5842393 5842420 4 104 2.5 0.0 1.2 1.8 134 chr2L 5842286 intron TrissinR + chr2L 5842353 intron TrissinR + chr2L 5842420 intron TrissinR + chr2L_4_5840001 chr2L_5840001 RAL-406 187 chr2L 5847924 5847936 chr2L 5848077 5848091 7 153 17.0 6.5 11.8 0.5 167 chr2L 5847924 intron TrissinR + chr2L 5848008 intron TrissinR + chr2L 5848091 intron TrissinR + chr2L_7_5845001 chr2L_5845001 RAL-406 188 chr2L 5847941 5847968 chr2L 5848071 5848123 16 151 7.5 5.0 6.2 2.2 182 chr2L 5847941 intron TrissinR + chr2L 5848032 intron TrissinR + chr2L 5848123 intron TrissinR + chr2L_16_5845001 chr2L_5845001 RAL-406 189 chr2L 5853715 5853749 chr2L 5853800 5853848 7 92 4.5 4.5 4.5 1.3 133 chr2L 5853715 intron TrissinR + chr2L 5853782 intron TrissinR + chr2L 5853848 intron TrissinR + chr2L_7_5850001 chr2L_5850001 RAL-406 190 chr2L 5881728 5881749 chr2L 5881822 5881848 8 95 5.5 3.5 4.5 1.5 120 chr2L 5881728 intergenic not near genes chr2L 5881788 intergenic not near genes chr2L 5881848 intergenic not near genes chr2L_8_5880001 chr2L_5880001 RAL-406 191 chr2L 5895948 5895964 chr2L 5896028 5896053 7 91 5.0 2.0 3.5 1.6 105 chr2L 5895948 intergenic not near genes chr2L 5896000 intergenic not near genes chr2L 5896053 intergenic not near genes chr2L_7_5895001 chr2L_5895001 RAL-406 192 chr2L 5922362 5922394 chr2L 5922440 5922444 11 86 10.0 8.5 9.2 1.1 82 chr2L 5922362 3` UTR bchs + chr2L 5922403 3` UTR bchs + chr2L 5922444 3` UTR bchs + chr2L_11_5920001 chr2L_5920001 RAL-406 193 chr2L 5989034 5989059 chr2L 5989130 5989135 9 90 4.5 0.5 2.5 2.6 101 chr2L 5989034 intergenic ifc +,lid - chr2L 5989084 intergenic ifc +,lid - chr2L 5989135 intergenic lid -,ifc + chr2L_9_5985001 chr2L_5985001 RAL-406 194 chr2L 5993308 5993359 chr2L 5993419 5993470 23 108 4.5 4.0 4.2 4.4 162 chr2L 5993308 exon lid - chr2L 5993389 intron lid - chr2L 5993470 intron lid - chr2L_23_5990001 chr2L_5990001 RAL-406 195 chr2L 5994908 5994935 chr2L 5995006 5995011 10 94 0.5 3.0 1.8 3.6 103 chr2L 5994908 intron lid - chr2L 5994960 intron lid - chr2L 5995011 intron lid - chr2L_10_5990001 chr2L_5990001 RAL-406 196 chr2L 6018209 6018340 chr2L 6018308 6018483 34 118 1.0 1.0 1.0 17.0 274 chr2L 6018209 intron H2.0 - chr2L 6018346 intron H2.0 - chr2L 6018483 intron H2.0 - chr2L_34_6015001 chr2L_6015001 RAL-406 197 chr2L 6242836 6242885 chr2L 6242942 6242977 13 101 3.5 0.5 2.0 4.3 141 chr2L 6242836 intergenic not near genes chr2L 6242906 intergenic not near genes chr2L 6242977 intergenic not near genes chr2L_13_6240001 chr2L_6240001 RAL-406 198 chr2L 6268493 6268533 chr2L 6268599 6268639 6 98 7.5 1.5 4.5 1.1 146 chr2L 6268493 intron Ddr + chr2L 6268566 intron Ddr + chr2L 6268639 intron Ddr + chr2L_6_6265001 chr2L_6265001 RAL-406 199 chr2L 6276906 6276912 chr2L 6277002 6277008 6 96 0.0 4.0 2.0 2.0 102 chr2L 6276906 intron Ddr + chr2L 6276957 intron Ddr + chr2L 6277008 intron Ddr + chr2L_6_6275001 chr2L_6275001 RAL-406 200 chr2L 6283943 6283961 chr2L 6284059 6284092 7 127 4.5 1.5 3.0 1.8 149 chr2L 6283943 intron Ddr + chr2L 6284018 intron Ddr + chr2L 6284092 intron Ddr + chr2L_7_6280001 chr2L_6280001 RAL-406 201 chr2L 6283962 6283976 chr2L 6284053 6284058 5 112 2.0 1.5 1.8 1.8 96 chr2L 6283962 intron Ddr + chr2L 6284010 intron Ddr + chr2L 6284058 intron Ddr + chr2L_5_6280001 chr2L_6280001 RAL-406 202 chr2L 6286370 6286423 chr2L 6286484 6286537 10 110 1.5 6.0 3.8 2.1 167 chr2L 6286370 intron Ddr + chr2L 6286454 intron Ddr + chr2L 6286537 intron Ddr + chr2L_10_6285001 chr2L_6285001 RAL-406 203 chr2L 6312880 6312924 chr2L 6312998 6313018 14 108 2.5 5.5 4.0 2.8 138 chr2L 6312880 intron Ddr + chr2L 6312949 intron Ddr + chr2L 6313018 intron Ddr + chr2L_14_6310001 chr2L_6310001 RAL-406 204 chr2L 6363128 6363183 chr2L 6366070 6366082 Burdock 13 2932 5.0 4.0 4.5 2.4 2954 chr2L 6363128 intergenic not near genes chr2L 6364605 intergenic not near genes chr2L 6366082 intergenic not near genes chr2L_13_6360001 chr2L_6360001 RAL-406 205 chr2L 6387982 6388003 chr2L 6388081 6388102 14 98 13.0 3.5 8.2 1.5 120 chr2L 6387982 intron CG42368 - chr2L 6388042 intron CG42368 - chr2L 6388102 intron CG42368 - chr2L_14_6385001 chr2L_6385001 RAL-406 206 chr2L 6388007 6388021 chr2L 6388076 6388104 6 90 9.0 3.5 6.2 0.8 97 chr2L 6388007 intron CG42368 - chr2L 6388056 intron CG42368 - chr2L 6388104 intron CG42368 - chr2L_6_6385001 chr2L_6385001 RAL-406 207 chr2L 6400146 6400151 chr2L 6400391 6400396 4 245 4.0 12.5 8.2 0.4 250 chr2L 6400146 intron CG42368 - chr2L 6400271 intron CG42368 - chr2L 6400396 intron CG42368 - chr2L_4_6400001 chr2L_6400001 RAL-406 208 chr2L 6400152 6400171 chr2L 6400372 6400394 12 233 2.0 9.0 5.5 1.8 242 chr2L 6400152 intron CG42368 - chr2L 6400273 intron CG42368 - chr2L 6400394 intron CG42368 - chr2L_12_6400001 chr2L_6400001 RAL-406 209 chr2L 6426834 6426884 chr2L 6445114 6445159 roo 17 18275 8.0 6.0 7.0 2.1 18325 chr2L 6426834 3` UTR CG9527 - chr2L 6435996 intron CG9527 - chr2L 6445159 exon CG9527 - chr2L_17_6435001 chr2L_6435001 RAL-406 210 chr2L 6454738 6454777 chr2L 6454856 6454897 12 116 6.5 4.5 5.5 1.8 159 chr2L 6454738 intron retm - chr2L 6454818 intron retm - chr2L 6454897 intron retm - chr2L_12_6450001 chr2L_6450001 RAL-406 211 chr2L 6462837 6462891 chr2L 6462945 6462999 14 106 0.0 8.5 4.2 2.7 162 chr2L 6462837 intron CG16947 - chr2L 6462918 intron CG16947 - chr2L 6462999 intron CG16947 - chr2L_14_6460001 chr2L_6460001 RAL-406 212 chr2L 6508834 6508875 chr2L 6508956 6508997 16 121 5.5 4.0 4.8 2.8 163 chr2L 6508834 intron CG31637 + chr2L 6508916 intron CG31637 + chr2L 6508997 intron CG31637 + chr2L_16_6505001 chr2L_6505001 RAL-406 213 chr2L 6538557 6538588 chr2L 6538645 6538688 8 96 1.5 3.0 2.2 2.5 131 chr2L 6538557 intron eya - chr2L 6538622 intron eya - chr2L 6538688 intron eya - chr2L_8_6535001 chr2L_6535001 RAL-406 214 chr2L 6564824 6564879 chr2L 6564937 6564990 16 111 3.0 3.0 3.0 4.0 166 chr2L 6564824 3` UTR CG13766 - chr2L 6564907 3` UTR CG13766 - chr2L 6564990 3` UTR CG13766 - chr2L_16_6560001 chr2L_6560001 RAL-406 215 chr2L 6589939 6590238 chr2L 6590040 6590334 11 91 6.0 5.5 5.8 1.6 395 chr2L 6589939 intron CG11319 - chr2L 6590136 intron CG11319 - chr2L 6590334 intron CG11319 - chr2L_11_6590001 chr2L_6590001 RAL-406 216 chr2L 6799576 6799620 chr2L 6799686 6799729 14 108 6.5 3.5 5.0 2.3 153 chr2L 6799576 5` UTR CR43610 + chr2L 6799652 intergenic CR43610 +,CG17376 - chr2L 6799729 intergenic CR43610 +,CG17376 - chr2L_14_6795001 chr2L_6795001 RAL-406 217 chr2L 6868119 6868139 chr2L 6868225 6868260 8 115 10.0 9.5 9.8 0.7 141 chr2L 6868119 intron Nha1 - chr2L 6868190 intron Nha1 - chr2L 6868260 intron Nha1 - chr2L_8_6865001 chr2L_6865001 RAL-406 218 chr2L 6871558 6871601 chr2L 6871668 6871693 8 104 6.0 8.0 7.0 1.0 135 chr2L 6871558 intron CR44915 - chr2L 6871626 intron CR44915 - chr2L 6871693 intron CR44915 - chr2L_8_6870001 chr2L_6870001 RAL-406 219 chr2L 6876773 6876810 chr2L 6882979 6883016 diver 5 6199 4.5 9.5 7.0 0.6 6243 chr2L 6876773 intron Nlg2 + chr2L 6879894 intron Nlg2 + chr2L 6883016 intron Nlg2 + chr2L_5_6875001 chr2L_6875001 RAL-406 220 chr2L 6991409 6991436 chr2L 6998550 6998557 HMS-Beagle 4 7133 6.0 5.0 5.5 0.6 7148 chr2L 6991409 intron uif - chr2L 6994983 intron uif - chr2L 6998557 intron uif - chr2L_4_6990001 chr2L_6990001 RAL-406 221 chr2L 7043493 7043532 chr2L 7043600 7043639 10 107 5.0 1.0 3.0 2.5 146 chr2L 7043493 intron milt + chr2L 7043566 intron milt + chr2L 7043639 intron milt + chr2L_10_7040001 chr2L_7040001 RAL-406 222 chr2L 7107576 7107608 chr2L 7107671 7107699 7 95 1.0 7.0 4.0 1.4 123 chr2L 7107576 intron Pvf3 - chr2L 7107638 intron Pvf3 - chr2L 7107699 intron Pvf3 - chr2L_7_7105001 chr2L_7105001 RAL-406 223 chr2L 7111734 7111774 chr2L 7111839 7111849 4 96 1.0 0.5 0.8 2.2 115 chr2L 7111734 intron Pvf3 - chr2L 7111792 intron Pvf3 - chr2L 7111849 intron Pvf3 - chr2L_4_7110001 chr2L_7110001 RAL-406 224 chr2L 7125769 7125782 chr2L 7125905 7125918 6 136 9.5 5.5 7.5 0.7 149 chr2L 7125769 intron Pvf3 - chr2L 7125844 intron Pvf3 - chr2L 7125918 intron Pvf3 - chr2L_6_7125001 chr2L_7125001 RAL-406 225 chr2L 7125788 7125799 chr2L 7125924 7125935 6 136 6.5 9.5 8.0 0.7 147 chr2L 7125788 intron Pvf3 - chr2L 7125862 intron Pvf3 - chr2L 7125935 intron Pvf3 - chr2L_6_7125001 chr2L_7125001 RAL-406 226 chr2L 7143141 7143184 chr2L 7143242 7143285 20 100 1.5 8.0 4.8 3.4 144 chr2L 7143141 intron,5` UTR Pvf3 -,CR44612 + chr2L 7143213 intron,5` UTR Pvf3 -,CR44612 + chr2L 7143285 intron,5` UTR Pvf3 -,CR44612 + chr2L_20_7140001 chr2L_7140001 RAL-406 227 chr2L 7149970 7150012 chr2L 7150090 7150132 11 119 6.5 7.0 6.8 1.4 162 chr2L 7149970 intron Pvf3 - chr2L 7150051 intron Pvf3 - chr2L 7150132 intron Pvf3 - chr2L_11_7150001 chr2L_7150001 RAL-406 228 chr2L 7152187 7152193 chr2L 7152279 7152295 4 95 7.5 1.5 4.5 0.7 108 chr2L 7152187 intron Pvf3 - chr2L 7152241 intron Pvf3 - chr2L 7152295 intron Pvf3 - chr2L_4_7150001 chr2L_7150001 RAL-406 229 chr2L 7167103 7167126 chr2L 7167199 7167222 8 94 10.5 1.0 5.8 1.2 119 chr2L 7167103 intergenic not near genes chr2L 7167162 intergenic not near genes chr2L 7167222 intergenic not near genes chr2L_8_7165001 chr2L_7165001 RAL-406 230 chr2L 7215275 7215291 chr2L 7215360 7215393 4 98 1.0 4.5 2.8 1.1 118 chr2L 7215275 intron CG13784 - chr2L 7215334 intron CG13784 - chr2L 7215393 intron CG13784 - chr2L_4_7215001 chr2L_7215001 RAL-406 231 chr2L 7295986 7296022 chr2L 7296137 7296182 7 158 3.0 2.0 2.5 2.0 196 chr2L 7295986 intergenic not near genes chr2L 7296084 intergenic not near genes chr2L 7296182 intergenic not near genes chr2L_7_7295001 chr2L_7295001 RAL-406 232 chr2L 7335184 7335212 chr2L 7335301 7335328 15 116 9.0 6.5 7.8 1.7 144 chr2L 7335184 intron Wnt6 + chr2L 7335256 intron Wnt6 + chr2L 7335328 intron Wnt6 + chr2L_15_7335001 chr2L_7335001 RAL-406 233 chr2L 7335222 7335231 chr2L 7335299 7335348 4 107 5.5 5.0 5.2 0.6 126 chr2L 7335222 intron Wnt6 + chr2L 7335285 intron Wnt6 + chr2L 7335348 intron Wnt6 + chr2L_4_7335001 chr2L_7335001 RAL-406 234 chr2L 7399306 7399329 chr2L 7399680 7399722 8 383 1.0 12.0 6.5 1.1 416 chr2L 7399306 intergenic not near genes chr2L 7399514 intergenic not near genes chr2L 7399722 intergenic not near genes chr2L_8_7395001 chr2L_7395001 RAL-406 235 chr2L 7436185 7436217 chr2L 7436291 7436331 21 112 3.5 0.5 2.0 7.0 146 chr2L 7436185 intergenic not near genes chr2L 7436258 intergenic not near genes chr2L 7436331 intergenic not near genes chr2L_21_7435001 chr2L_7435001 RAL-406 236 chr2L 7439447 7439450 chr2L 7439546 7439549 4 99 0.0 11.0 5.5 0.6 102 chr2L 7439447 intron CG5973 + chr2L 7439498 intron CG5973 + chr2L 7439549 intron CG5973 + chr2L_4_7435001 chr2L_7435001 RAL-406 237 chr2L 7449725 7449774 chr2L 7449821 7449846 21 95 6.5 2.0 4.2 4.0 121 chr2L 7449725 5` UTR santa-maria - chr2L 7449786 5` UTR santa-maria - chr2L 7449846 5` UTR santa-maria - chr2L_21_7445001 chr2L_7445001 RAL-406 238 chr2L 7489591 7489604 chr2L 7489717 7489730 12 126 3.5 0.0 1.8 4.3 139 chr2L 7489591 intron Ziz - chr2L 7489660 intron Ziz - chr2L 7489730 intron Ziz - chr2L_12_7485001 chr2L_7485001 RAL-406 239 chr2L 7493391 7493415 chr2L 7493496 7493507 7 102 0.0 5.5 2.8 1.8 116 chr2L 7493391 intron Ziz - chr2L 7493449 intron Ziz - chr2L 7493507 intron Ziz - chr2L_7_7490001 chr2L_7490001 RAL-406 240 chr2L 7513766 7513794 chr2L 7513858 7513891 14 96 3.5 7.0 5.2 2.3 125 chr2L 7513766 intron RapGAP1 - chr2L 7513828 intron RapGAP1 - chr2L 7513891 intron RapGAP1 - chr2L_14_7510001 chr2L_7510001 RAL-406 241 chr2L 7563457 7563472 chr2L 7563565 7563580 5 108 11.5 3.0 7.2 0.6 123 chr2L 7563457 intron RapGAP1 - chr2L 7563518 intron RapGAP1 - chr2L 7563580 intron RapGAP1 - chr2L_5_7560001 chr2L_7560001 RAL-406 242 chr2L 7565822 7565853 chr2L 7566281 7566297 8 456 5.0 4.0 4.5 1.5 475 chr2L 7565822 intron RapGAP1 - chr2L 7566060 intron RapGAP1 - chr2L 7566297 intron RapGAP1 - chr2L_8_7565001 chr2L_7565001 RAL-406 243 chr2L 7567465 7567511 chr2L 7567562 7567608 24 95 4.5 5.5 5.0 4.0 143 chr2L 7567465 intron RapGAP1 - chr2L 7567536 intron RapGAP1 - chr2L 7567608 intron RapGAP1 - chr2L_24_7565001 chr2L_7565001 RAL-406 244 chr2L 7579185 7579210 chr2L 7579396 7579421 BS 7 210 4.0 0.5 2.2 2.2 236 chr2L 7579185 intergenic RapGAP1 - chr2L 7579303 intergenic RapGAP1 - chr2L 7579421 intergenic RapGAP1 - chr2L_7_7575001 chr2L_7575001 RAL-406 245 chr2L 7585492 7585500 chr2L 7585610 7585617 4 117 6.5 0.5 3.5 0.9 125 chr2L 7585492 intergenic not near genes chr2L 7585554 intergenic not near genes chr2L 7585617 intergenic not near genes chr2L_4_7585001 chr2L_7585001 RAL-406 246 chr2L 7670278 7670310 chr2L 7670382 7670414 9 104 8.0 2.5 5.2 1.5 136 chr2L 7670278 intron,intron Slob -,Myo28B1 + chr2L 7670346 intron,intron Slob -,Myo28B1 + chr2L 7670414 intron,intron Slob -,Myo28B1 + chr2L_9_7670001 chr2L_7670001 RAL-406 247 chr2L 7670311 7670328 chr2L 7670381 7670432 12 101 5.5 2.5 4.0 2.4 121 chr2L 7670311 intron,intron Slob -,Myo28B1 + chr2L 7670372 intron,intron Slob -,Myo28B1 + chr2L 7670432 intron,intron Slob -,Myo28B1 + chr2L_12_7670001 chr2L_7670001 RAL-406 248 chr2L 7702541 7702566 chr2L 7702637 7702678 10 101 1.0 7.5 4.2 1.9 137 chr2L 7702541 intergenic Tep3 + chr2L 7702610 intergenic Tep3 + chr2L 7702678 intergenic Tep3 + chr2L_10_7700001 chr2L_7700001 RAL-406 249 chr2L 7779405 7779415 chr2L 7779549 7779559 4 144 0.0 8.0 4.0 0.8 154 chr2L 7779405 intergenic not near genes chr2L 7779482 intergenic not near genes chr2L 7779559 intergenic not near genes chr2L_4_7775001 chr2L_7775001 RAL-406 250 chr2L 7854242 7854268 chr2L 7854339 7854355 10 95 7.5 7.5 7.5 1.2 113 chr2L 7854242 intron CG14535 - chr2L 7854298 intron CG14535 - chr2L 7854355 intron CG14535 - chr2L_10_7850001 chr2L_7850001 RAL-406 251 chr2L 7922723 7922773 chr2L 7922824 7922874 19 96 9.5 10.0 9.8 1.8 151 chr2L 7922723 intron Snoo - chr2L 7922798 intron Snoo - chr2L 7922874 intron Snoo - chr2L_19_7920001 chr2L_7920001 RAL-406 252 chr2L 7959040 7959072 chr2L 7960452 7960505 pogo 4 1417 3.5 0.0 1.8 1.4 1465 chr2L 7959040 intron Snoo - chr2L 7959772 intron Snoo - chr2L 7960505 intron Snoo - chr2L_4_7955001 chr2L_7955001 RAL-406 253 chr2L 7977069 7977104 chr2L 7984065 7984083 297 5 6981 3.5 0.5 2.0 1.7 7014 chr2L 7977069 intron Snoo - chr2L 7980576 intron Snoo - chr2L 7984083 intron,5` UTR Snoo -,CG7231 + chr2L_5_7980001 chr2L_7980001 RAL-406 254 chr2L 7998550 7998569 chr2L 7998648 7998666 15 97 6.0 10.0 8.0 1.7 116 chr2L 7998550 intergenic Sirup + chr2L 7998608 intergenic Sirup + chr2L 7998666 intergenic Sirup + chr2L_15_7995001 chr2L_7995001 RAL-406 255 chr2L 8003046 8003065 chr2L 8003148 8003162 10 100 0.5 11.5 6.0 1.4 116 chr2L 8003046 intron Wwox - chr2L 8003104 intron Wwox - chr2L 8003162 intron Wwox - chr2L_10_8000001 chr2L_8000001 RAL-406 256 chr2L 8013598 8013614 chr2L 8018822 8018838 copia 4 5224 13.5 0.0 6.8 0.5 5240 chr2L 8013598 intron Tg + chr2L 8016218 intron Tg + chr2L 8018838 intron Tg + chr2L_4_8015001 chr2L_8015001 RAL-406 257 chr2L 8013625 8013641 chr2L 8023580 8023596 copia 5 9955 7.5 3.0 5.2 0.8 9971 chr2L 8013625 intron Tg + chr2L 8018610 intron Tg + chr2L 8023596 intron Tg + chr2L_5_8015001 chr2L_8015001 RAL-406 258 chr2L 8018815 8018829 chr2L 8023619 8023633 Doc 6 4804 0.0 11.0 5.5 0.9 4818 chr2L 8018815 intron Tg + chr2L 8021224 intron Tg + chr2L 8023633 intron Tg + chr2L_6_8020001 chr2L_8020001 RAL-406 259 chr2L 8128012 8128026 chr2L 8128115 8128130 7 101 14.5 11.0 12.8 0.5 118 chr2L 8128012 intron CG8668 + chr2L 8128071 intron CG8668 + chr2L 8128130 intron CG8668 + chr2L_7_8125001 chr2L_8125001 RAL-406 260 chr2L 8128034 8128061 chr2L 8128112 8128156 9 85 5.5 9.5 7.5 1.1 122 chr2L 8128034 intron CG8668 + chr2L 8128095 intron CG8668 + chr2L 8128156 intron CG8668 + chr2L_9_8125001 chr2L_8125001 RAL-406 261 chr2L 8143167 8143220 chr2L 8143338 8143391 22 170 1.5 4.0 2.8 5.8 224 chr2L 8143167 intron CG8552 - chr2L 8143279 intron CG8552 - chr2L 8143391 intron CG8552 - chr2L_22_8140001 chr2L_8140001 RAL-406 262 chr2L 8171274 8171301 chr2L 8171349 8171402 21 96 0.0 2.0 1.0 10.5 128 chr2L 8171274 intron Piezo + chr2L 8171338 intron Piezo + chr2L 8171402 intron Piezo + chr2L_21_8170001 chr2L_8170001 RAL-406 263 chr2L 8184902 8184912 chr2L 8185013 8185023 4 111 16.5 8.5 12.5 0.3 121 chr2L 8184902 intron Piezo + chr2L 8184962 intron Piezo + chr2L 8185023 intron Piezo + chr2L_4_8180001 chr2L_8180001 RAL-406 264 chr2L 8184913 8184953 chr2L 8185009 8185059 15 105 4.5 8.0 6.2 2.1 146 chr2L 8184913 intron Piezo + chr2L 8184986 intron Piezo + chr2L 8185059 intron Piezo + chr2L_15_8180001 chr2L_8180001 RAL-406 265 chr2L 8270002 8270025 chr2L 8270084 8270117 7 94 8.0 4.5 6.2 1.0 115 chr2L 8270002 intron Btk29A - chr2L 8270060 intron Btk29A - chr2L 8270117 intron Btk29A - chr2L_7_8270001 chr2L_8270001 RAL-406 266 chr2L 8271617 8271774 chr2L 8271702 8271870 24 96 4.5 2.5 3.5 5.3 253 chr2L 8271617 intron Btk29A - chr2L 8271744 intron Btk29A - chr2L 8271870 intron Btk29A - chr2L_24_8270001 chr2L_8270001 RAL-406 267 chr2L 8285004 8285037 chr2L 8285096 8285121 13 94 10.5 7.5 9.0 1.3 117 chr2L 8285004 intron Btk29A - chr2L 8285062 intron Btk29A - chr2L 8285121 intron Btk29A - chr2L_13_8285001 chr2L_8285001 RAL-406 268 chr2L 8286282 8286312 chr2L 8286386 8286411 7 99 3.0 5.0 4.0 1.4 129 chr2L 8286282 intron Btk29A - chr2L 8286346 intron Btk29A - chr2L 8286411 intron Btk29A - chr2L_7_8285001 chr2L_8285001 RAL-406 269 chr2L 8351548 8351576 chr2L 8351645 8351673 11 94 0.5 11.0 5.8 1.6 125 chr2L 8351548 intergenic CG7778 + chr2L 8351610 intergenic CG7778 + chr2L 8351673 intergenic not near genes chr2L_11_8350001 chr2L_8350001 RAL-406 270 chr2L 8411770 8411811 chr2L 8411941 8411981 11 166 5.5 6.0 5.8 1.6 211 chr2L 8411770 5` UTR CG13397 - chr2L 8411876 intergenic CG13397 -,CG13398 - chr2L 8411981 intergenic CG13397 -,CG13398 - chr2L_11_8410001 chr2L_8410001 RAL-406 271 chr2L 8412875 8412922 chr2L 8412972 8413028 9 104 4.5 4.5 4.5 1.6 153 chr2L 8412875 3` UTR CG13398 - chr2L 8412952 3` UTR CG13398 - chr2L 8413028 3` UTR CG13398 - chr2L_9_8410001 chr2L_8410001 RAL-406 272 chr2L 8452423 8452448 chr2L 8461599 8461617 roo 10 9185 6.5 5.5 6.0 1.4 9194 chr2L 8452423 intron fu12 - chr2L 8457020 intron fu12 - chr2L 8461617 intron fu12 - chr2L_10_8455001 chr2L_8455001 RAL-406 273 chr2L 8477229 8477265 chr2L 8477670 8477716 10 448 2.5 3.0 2.8 2.6 487 chr2L 8477229 intron d + chr2L 8477472 intron,exon d +,CheA29a + chr2L 8477716 intron,exon d +,CheA29a + chr2L_10_8475001 chr2L_8475001 RAL-406 274 chr2L 8498185 8498237 chr2L 8498286 8498338 22 99 5.5 3.0 4.2 4.2 153 chr2L 8498185 intron Dh31 - chr2L 8498262 intron Dh31 - chr2L 8498338 intron Dh31 - chr2L_22_8495001 chr2L_8495001 RAL-406 275 chr2L 8503590 8503622 chr2L 8503693 8503725 18 101 5.0 6.0 5.5 2.8 135 chr2L 8503590 intron Dh31 - chr2L 8503658 intron Dh31 - chr2L 8503725 intron Dh31 - chr2L_18_8500001 chr2L_8500001 RAL-406 276 chr2L 8510126 8510172 chr2L 8510225 8510281 17 106 0.5 4.0 2.2 5.3 155 chr2L 8510126 exon CG13096 - chr2L 8510204 intron CG13096 - chr2L 8510281 intron CG13096 - chr2L_17_8510001 chr2L_8510001 RAL-406 277 chr2L 8554359 8554388 chr2L 8554465 8554503 10 114 2.0 5.5 3.8 2.1 144 chr2L 8554359 intron Sema-1a + chr2L 8554431 intron Sema-1a + chr2L 8554503 intron Sema-1a + chr2L_10_8550001 chr2L_8550001 RAL-406 278 chr2L 8591159 8591182 chr2L 8591293 8591316 6 134 5.0 3.5 4.2 1.2 157 chr2L 8591159 intron,intron Sema-1a +,CR43855 - chr2L 8591238 intron,intron Sema-1a +,CR43855 - chr2L 8591316 intron,intron Sema-1a +,CR43855 - chr2L_6_8590001 chr2L_8590001 RAL-406 279 chr2L 8591916 8591958 chr2L 8592031 8592073 9 112 4.0 3.0 3.5 2.0 157 chr2L 8591916 intron,intron Sema-1a +,CR43855 - chr2L 8591994 intron,intron Sema-1a +,CR43855 - chr2L 8592073 intron,intron Sema-1a +,CR43855 - chr2L_9_8590001 chr2L_8590001 RAL-406 280 chr2L 8612836 8612869 chr2L 8612933 8612966 14 97 3.5 8.0 5.8 2.1 130 chr2L 8612836 intron Sema-1a + chr2L 8612901 intron Sema-1a + chr2L 8612966 intron Sema-1a + chr2L_14_8610001 chr2L_8610001 RAL-406 281 chr2L 8635271 8635290 chr2L 8635347 8635360 5 76 5.0 7.0 6.0 0.7 89 chr2L 8635271 intron Sema-1a + chr2L 8635316 intron Sema-1a + chr2L 8635360 intron Sema-1a + chr2L_5_8635001 chr2L_8635001 RAL-406 282 chr2L 8649907 8649961 chr2L 8650016 8650050 12 104 1.0 4.5 2.8 3.2 143 chr2L 8649907 intron Sema-1a + chr2L 8649978 intron Sema-1a + chr2L 8650050 intron Sema-1a + chr2L_12_8645001 chr2L_8645001 RAL-406 283 chr2L 8676827 8676876 chr2L 8676923 8676954 8 90 7.5 8.0 7.8 0.9 127 chr2L 8676827 3` UTR CG9287 - chr2L 8676890 exon CG9287 - chr2L 8676954 exon CG9287 - chr2L_8_8675001 chr2L_8675001 RAL-406 284 chr2L 8723095 8723147 chr2L 8731492 8731544 Tirant 19 8394 3.5 1.0 2.2 5.9 8449 chr2L 8723095 intron raw - chr2L 8727320 intron raw - chr2L 8731544 intron raw - chr2L_19_8725001 chr2L_8725001 RAL-406 285 chr2L 8765157 8765201 chr2L 8765264 8765284 21 97 4.5 2.5 3.5 4.7 127 chr2L 8765157 intergenic CG9463 - chr2L 8765220 intergenic CG9463 - chr2L 8765284 3` UTR CG9463 - chr2L_21_8765001 chr2L_8765001 RAL-406 286 chr2L 8794999 8795035 chr2L 8795092 8795133 23 95 6.5 4.5 5.5 3.5 134 chr2L 8794999 intergenic not near genes chr2L 8795066 intergenic not near genes chr2L 8795133 intergenic not near genes chr2L_23_8795001 chr2L_8795001 RAL-406 287 chr2L 8860069 8860106 chr2L 8860376 8860397 10 301 5.5 4.5 5.0 1.7 328 chr2L 8860069 intergenic not near genes chr2L 8860233 intergenic not near genes chr2L 8860397 intergenic not near genes chr2L_10_8860001 chr2L_8860001 RAL-406 288 chr2L 8891854 8891900 chr2L 8891952 8891996 6 97 1.0 0.0 0.5 4.0 142 chr2L 8891854 3` UTR CG42713 + chr2L 8891925 3` UTR CG42713 + chr2L 8891996 3` UTR CG42713 + chr2L_6_8890001 chr2L_8890001 RAL-406 289 chr2L 8939645 8939695 chr2L 8939745 8939795 25 99 6.5 10.5 8.5 2.6 150 chr2L 8939645 3` UTR Tsp29Fb + chr2L 8939720 3` UTR Tsp29Fb + chr2L 8939795 3` UTR CG9510 - chr2L_25_8935001 chr2L_8935001 RAL-406 290 chr2L 8956219 8956244 chr2L 8956306 8956316 11 93 2.5 4.5 3.5 2.4 97 chr2L 8956219 intron CG31886 - chr2L 8956268 intron CG31886 - chr2L 8956316 intron CG31886 - chr2L_11_8955001 chr2L_8955001 RAL-406 291 chr2L 8980135 8980179 chr2L 8980232 8980276 20 93 6.0 5.5 5.8 2.9 141 chr2L 8980135 exon CG13101 - chr2L 8980206 5` UTR CG13101 - chr2L 8980276 5` UTR CG13101 - chr2L_20_8980001 chr2L_8980001 RAL-406 292 chr2L 8980437 8980477 chr2L 8980546 8980571 15 106 6.5 2.0 4.2 2.9 134 chr2L 8980437 intron CG13101 - chr2L 8980504 intron CG13101 - chr2L 8980571 intron CG13101 - chr2L_15_8980001 chr2L_8980001 RAL-406 293 chr2L 8985578 8985626 chr2L 8985764 8985812 18 184 5.0 12.0 8.5 1.9 234 chr2L 8985578 intergenic rost - chr2L 8985695 intergenic rost - chr2L 8985812 intergenic rost - chr2L_18_8985001 chr2L_8985001 RAL-406 294 chr2L 8994101 8994127 chr2L 8994197 8994222 6 96 5.0 2.5 3.8 1.2 121 chr2L 8994101 3` UTR alien - chr2L 8994162 3` UTR alien - chr2L 8994222 3` UTR alien - chr2L_6_8990001 chr2L_8990001 RAL-406 295 chr2L 9000263 9000270 chr2L 9007793 9007800 roo 5 7530 15.5 2.0 8.8 0.5 7537 chr2L 9000263 intergenic Try29F + chr2L 9004032 intergenic not near genes chr2L 9007800 intergenic not near genes chr2L_5_9000001 chr2L_9000001 RAL-406 296 chr2L 9000272 9000306 chr2L 9007792 9007836 roo 18 7525 7.5 2.0 4.8 3.1 7564 chr2L 9000272 intergenic Try29F + chr2L 9004054 intergenic not near genes chr2L 9007836 intergenic not near genes chr2L_18_9000001 chr2L_9000001 RAL-406 297 chr2L 9007797 9007805 chr2L 9007896 9007897 4 97 1.5 0.0 0.8 2.2 100 chr2L 9007797 intergenic not near genes chr2L 9007847 intergenic not near genes chr2L 9007897 intergenic not near genes chr2L_4_9005001 chr2L_9005001 RAL-406 298 chr2L 9027283 9027319 chr2L 9027423 9027448 7 133 16.0 16.0 16.0 0.4 165 chr2L 9027283 intron,intron CG9582 -,CR44352 - chr2L 9027366 intron,intron CG9582 -,CR44352 - chr2L 9027448 intron,intron CG9582 -,CR44352 - chr2L_7_9025001 chr2L_9025001 RAL-406 299 chr2L 9031367 9031406 chr2L 9031470 9031478 13 93 0.5 1.0 0.8 7.2 111 chr2L 9031367 intron,intron CG9582 -,CR44352 - chr2L 9031422 intron,intron CG9582 -,CR44352 - chr2L 9031478 intron,intron CG9582 -,CR44352 - chr2L_13_9030001 chr2L_9030001 RAL-406 300 chr2L 9098616 9098666 chr2L 9098719 9098729 20 97 5.0 4.0 4.5 3.6 113 chr2L 9098616 intergenic CG31609 + chr2L 9098672 intergenic CG31609 + chr2L 9098729 intergenic not near genes chr2L_20_9095001 chr2L_9095001 RAL-406 301 chr2L 9114087 9114129 chr2L 9114172 9114219 10 83 4.0 4.5 4.2 1.9 132 chr2L 9114087 intergenic not near genes chr2L 9114153 intergenic not near genes chr2L 9114219 intergenic not near genes chr2L_10_9110001 chr2L_9110001 RAL-406 302 chr2L 9150640 9150682 chr2L 9150776 9150818 11 131 12.0 6.0 9.0 1.1 178 chr2L 9150640 intron CG32982 + chr2L 9150729 intron CG32982 + chr2L 9150818 intron CG32982 + chr2L_11_9150001 chr2L_9150001 RAL-406 303 chr2L 9217966 9218002 chr2L 9222783 9222827 Doc 9 4817 6.0 0.0 3.0 2.2 4861 chr2L 9217966 intron tai + chr2L 9220396 intron tai + chr2L 9222827 intron tai + chr2L_9_9220001 chr2L_9220001 RAL-406 304 chr2L 9225833 9225874 chr2L 9225943 9225984 18 109 5.5 5.0 5.2 2.9 151 chr2L 9225833 intron tai + chr2L 9225908 intron tai + chr2L 9225984 intron tai + chr2L_18_9225001 chr2L_9225001 RAL-406 305 chr2L 9261173 9261196 chr2L 9261270 9261272 6 92 12.0 6.0 9.0 0.6 99 chr2L 9261173 intron Ggamma30A + chr2L 9261222 intron Ggamma30A + chr2L 9261272 intron Ggamma30A + chr2L_6_9260001 chr2L_9260001 RAL-406 306 chr2L 9261197 9261207 chr2L 9261269 9261303 6 93 10.5 6.0 8.2 0.7 106 chr2L 9261197 intron Ggamma30A + chr2L 9261250 intron Ggamma30A + chr2L 9261303 intron Ggamma30A + chr2L_6_9260001 chr2L_9260001 RAL-406 307 chr2L 9263222 9263266 chr2L 9265838 9265857 7 2609 3.0 1.0 2.0 2.3 2635 chr2L 9263222 intron Ggamma30A + chr2L 9264540 intron Ggamma30A + chr2L 9265857 intron Ggamma30A + chr2L_7_9260001 chr2L_9260001 RAL-406 308 chr2L 9297357 9297404 chr2L 9297454 9297476 22 94 6.0 5.5 5.8 3.2 119 chr2L 9297357 3` UTR Ggamma30A + chr2L 9297416 3` UTR Ggamma30A + chr2L 9297476 3` UTR Ggamma30A + chr2L_22_9295001 chr2L_9295001 RAL-406 309 chr2L 9322793 9322970 chr2L 9322889 9323114 37 112 4.5 3.5 4.0 7.4 321 chr2L 9322793 intergenic not near genes chr2L 9322954 intergenic not near genes chr2L 9323114 intergenic not near genes chr2L_37_9320001 chr2L_9320001 RAL-406 310 chr2L 9339367 9339398 chr2L 9339478 9339479 15 104 8.0 11.0 9.5 1.4 112 chr2L 9339367 intron Eaat1 + chr2L 9339423 intron Eaat1 + chr2L 9339479 intron Eaat1 + chr2L_15_9335001 chr2L_9335001 RAL-406 311 chr2L 9359889 9359899 chr2L 9359987 9359989 8 102 5.5 7.0 6.2 1.1 100 chr2L 9359889 intergenic not near genes chr2L 9359939 intergenic not near genes chr2L 9359989 intergenic not near genes chr2L_8_9355001 chr2L_9355001 RAL-406 312 chr2L 9359901 9359920 chr2L 9359986 9360006 7 87 4.5 6.5 5.5 1.1 105 chr2L 9359901 intergenic not near genes chr2L 9359954 intergenic not near genes chr2L 9360006 intergenic not near genes chr2L_7_9355001 chr2L_9355001 RAL-406 313 chr2L 9380223 9380248 chr2L 9380338 9380363 8 114 6.5 4.0 5.2 1.3 140 chr2L 9380223 exon Shawl - chr2L 9380293 intron Shawl - chr2L 9380363 intron Shawl - chr2L_8_9380001 chr2L_9380001 RAL-406 314 chr2L 9393493 9393526 chr2L 9396479 9396513 jockey 10 2982 8.5 8.5 8.5 1.1 3020 chr2L 9393493 intron Shawl - chr2L 9395003 intron Shawl - chr2L 9396513 intron Shawl - chr2L_10_9395001 chr2L_9395001 RAL-406 315 chr2L 9402654 9402684 chr2L 9402752 9402782 12 96 6.0 5.5 5.8 1.8 128 chr2L 9402654 intron Shawl - chr2L 9402718 intron Shawl - chr2L 9402782 intron Shawl - chr2L_12_9400001 chr2L_9400001 RAL-406 316 chr2L 9402685 9402696 chr2L 9402743 9402784 6 78 4.0 5.0 4.5 1.1 99 chr2L 9402685 intron Shawl - chr2L 9402734 intron Shawl - chr2L 9402784 intron Shawl - chr2L_6_9400001 chr2L_9400001 RAL-406 317 chr2L 9407890 9407906 chr2L 9407990 9408008 4 102 5.0 9.0 7.0 0.5 118 chr2L 9407890 intron Shawl - chr2L 9407949 intron Shawl - chr2L 9408008 intron Shawl - chr2L_4_9405001 chr2L_9405001 RAL-406 318 chr2L 9421021 9421025 chr2L 9421154 9421189 5 155 0.0 6.5 3.2 1.2 168 chr2L 9421021 intron Mco1 + chr2L 9421105 intron Mco1 + chr2L 9421189 intron Mco1 + chr2L_5_9420001 chr2L_9420001 RAL-406 319 chr2L 9428487 9428537 chr2L 9428586 9428636 11 99 5.0 6.0 5.5 1.7 149 chr2L 9428487 exon CG42847 + chr2L 9428562 3` UTR CG42847 + chr2L 9428636 3` UTR CG42847 + chr2L_11_9425001 chr2L_9425001 RAL-406 320 chr2L 9464832 9464966 chr2L 9464929 9465072 12 95 0.0 0.0 0.0 12.0 240 chr2L 9464832 intergenic not near genes chr2L 9464952 intergenic not near genes chr2L 9465072 intergenic not near genes chr2L_12_9460001 chr2L_9460001 RAL-406 321 chr2L 9474773 9474807 chr2L 9474882 9474921 11 113 4.5 6.0 5.2 1.8 148 chr2L 9474773 intergenic not near genes chr2L 9474847 intergenic not near genes chr2L 9474921 intergenic not near genes chr2L_11_9470001 chr2L_9470001 RAL-406 322 chr2L 9490502 9490551 chr2L 9490602 9490646 8 92 3.5 2.0 2.8 2.1 144 chr2L 9490502 intergenic not near genes chr2L 9490574 intergenic not near genes chr2L 9490646 intergenic not near genes chr2L_8_9490001 chr2L_9490001 RAL-406 323 chr2L 9530686 9530695 chr2L 9531102 9531106 5 421 7.0 3.5 5.2 0.8 420 chr2L 9530686 intron Oatp30B + chr2L 9530896 intron Oatp30B + chr2L 9531106 intron Oatp30B + chr2L_5_9530001 chr2L_9530001 RAL-406 324 chr2L 9573168 9573198 chr2L 9573306 9573325 11 152 4.5 8.0 6.2 1.5 157 chr2L 9573168 3` UTR CG3838 + chr2L 9573246 3` UTR CG3838 + chr2L 9573325 3` UTR CG3838 + chr2L_11_9570001 chr2L_9570001 RAL-406 325 chr2L 9595626 9595650 chr2L 9595709 9595748 6 86 4.0 6.0 5.0 1.0 122 chr2L 9595626 intergenic not near genes chr2L 9595687 intergenic not near genes chr2L 9595748 intergenic not near genes chr2L_6_9595001 chr2L_9595001 RAL-406 326 chr2L 9601653 9601883 chr2L 9601761 9601983 27 104 5.0 7.0 6.0 3.9 330 chr2L 9601653 intergenic not near genes chr2L 9601818 intergenic not near genes chr2L 9601983 intergenic not near genes chr2L_27_9600001 chr2L_9600001 RAL-406 327 chr2L 9610125 9610146 chr2L 9610194 9610209 6 70 5.0 3.5 4.2 1.2 84 chr2L 9610125 intron gcm2 + chr2L 9610167 intron gcm2 + chr2L 9610209 intron gcm2 + chr2L_6_9610001 chr2L_9610001 RAL-406 328 chr2L 9620645 9620838 chr2L 9620792 9620941 18 139 0.0 0.5 0.2 15.0 296 chr2L 9620645 intron GlcAT-S + chr2L 9620793 intron GlcAT-S + chr2L 9620941 intron GlcAT-S + chr2L_18_9620001 chr2L_9620001 RAL-406 329 chr2L 9665828 9665833 chr2L 9665928 9665931 4 100 0.0 0.0 0.0 4.0 103 chr2L 9665828 intergenic not near genes chr2L 9665880 intergenic not near genes chr2L 9665931 intergenic not near genes chr2L_4_9665001 chr2L_9665001 RAL-406 330 chr2L 9667081 9667091 chr2L 9667211 9667221 5 130 7.5 0.5 4.0 1.0 140 chr2L 9667081 intergenic not near genes chr2L 9667151 intergenic not near genes chr2L 9667221 intergenic not near genes chr2L_5_9665001 chr2L_9665001 RAL-406 331 chr2L 9667093 9667220 chr2L 9667207 9667316 15 98 0.5 0.5 0.5 10.0 223 chr2L 9667093 intergenic not near genes chr2L 9667204 intergenic not near genes chr2L 9667316 intergenic not near genes chr2L_15_9665001 chr2L_9665001 RAL-406 332 chr2L 9677211 9677223 chr2L 9678349 9678352 4 1136 19.0 7.0 13.0 0.3 1141 chr2L 9677211 intergenic not near genes chr2L 9677782 intergenic not near genes chr2L 9678352 intergenic not near genes chr2L_4_9675001 chr2L_9675001 RAL-406 333 chr2L 9677230 9677257 chr2L 9678347 9678375 10 1127 9.5 7.0 8.2 1.1 1145 chr2L 9677230 intergenic not near genes chr2L 9677802 intergenic not near genes chr2L 9678375 intergenic not near genes chr2L_10_9675001 chr2L_9675001 RAL-406 334 chr2L 9707861 9707869 chr2L 9707969 9707975 4 110 12.0 5.0 8.5 0.4 114 chr2L 9707861 intron pelo + chr2L 9707918 intron pelo + chr2L 9707975 intron pelo + chr2L_4_9705001 chr2L_9705001 RAL-406 335 chr2L 9715024 9715040 chr2L 9715153 9715168 10 127 0.5 11.0 5.8 1.5 144 chr2L 9715024 3` UTR Nckx30C - chr2L 9715096 3` UTR Nckx30C - chr2L 9715168 3` UTR Nckx30C - chr2L_10_9715001 chr2L_9715001 RAL-406 336 chr2L 9719762 9719771 chr2L 9719865 9719874 6 103 0.0 3.0 1.5 2.4 112 chr2L 9719762 intron Nckx30C - chr2L 9719818 intron Nckx30C - chr2L 9719874 intron Nckx30C - chr2L_6_9715001 chr2L_9715001 RAL-406 337 chr2L 9770749 9770787 chr2L 9770872 9770908 1360 10 121 8.0 4.0 6.0 1.4 159 chr2L 9770749 intron ppk18 - chr2L 9770828 intron ppk18 - chr2L 9770908 exon ppk18 - chr2L_10_9770001 chr2L_9770001 RAL-406 338 chr2L 9836418 9836428 chr2L 9836484 9836528 6 92 6.5 5.5 6.0 0.9 110 chr2L 9836418 intron nAChRalpha6 - chr2L 9836473 intron nAChRalpha6 - chr2L 9836528 intron nAChRalpha6 - chr2L_6_9835001 chr2L_9835001 RAL-406 339 chr2L 9871506 9871532 chr2L 9871609 9871636 4 101 8.0 7.5 7.8 0.5 130 chr2L 9871506 intron nAChRalpha6 - chr2L 9871571 intron nAChRalpha6 - chr2L 9871636 intron nAChRalpha6 - chr2L_4_9870001 chr2L_9870001 RAL-406 340 chr2L 9883142 9883162 chr2L 9883258 9883278 9 116 12.5 2.5 7.5 1.1 136 chr2L 9883142 intron nAChRalpha6 - chr2L 9883210 intron nAChRalpha6 - chr2L 9883278 intron nAChRalpha6 - chr2L_9_9880001 chr2L_9880001 RAL-406 341 chr2L 9892482 9892534 chr2L 9892578 9892630 15 90 5.5 8.0 6.8 1.9 148 chr2L 9892482 intron mtDNA-helicase - chr2L 9892556 intron mtDNA-helicase - chr2L 9892630 intron mtDNA-helicase - chr2L_15_9890001 chr2L_9890001 RAL-406 342 chr2L 9973717 9973759 chr2L 9980846 9980851 HMS-Beagle 24 7124 4.0 3.0 3.5 5.3 7134 chr2L 9973717 intergenic not near genes chr2L 9977284 intergenic not near genes chr2L 9980851 intergenic not near genes chr2L_24_9975001 chr2L_9975001 RAL-406 343 chr2L 9982199 9982212 chr2L 9982322 9982335 7 123 0.5 6.0 3.2 1.7 136 chr2L 9982199 intergenic not near genes chr2L 9982267 intergenic not near genes chr2L 9982335 intergenic not near genes chr2L_7_9980001 chr2L_9980001 RAL-406 344 chr2L 9982214 9982224 chr2L 9982317 9982347 7 118 0.5 5.5 3.0 1.8 133 chr2L 9982214 intergenic not near genes chr2L 9982280 intergenic not near genes chr2L 9982347 intergenic not near genes chr2L_7_9980001 chr2L_9980001 RAL-406 345 chr2L 10023071 10023099 chr2L 10023160 10023202 10 99 3.0 5.0 4.0 2.0 131 chr2L 10023071 intergenic not near genes chr2L 10023136 intergenic not near genes chr2L 10023202 intergenic not near genes chr2L_10_10020001 chr2L_10020001 RAL-406 346 chr2L 10045429 10045436 chr2L 10045496 10045536 4 88 3.0 4.0 3.5 0.9 107 chr2L 10045429 intergenic not near genes chr2L 10045482 intergenic not near genes chr2L 10045536 intergenic not near genes chr2L_4_10045001 chr2L_10045001 RAL-406 347 chr2L 10105287 10105310 chr2L 10105356 10105400 8 87 4.5 4.5 4.5 1.5 113 chr2L 10105287 intron,intron CG44153 -,CG34109 + chr2L 10105344 intron,intron CG44153 -,CG34109 + chr2L 10105400 intron,intron CG44153 -,CG34109 + chr2L_8_10105001 chr2L_10105001 RAL-406 348 chr2L 10108959 10109009 chr2L 10109062 10109112 14 98 1.5 2.0 1.8 5.0 153 chr2L 10108959 intron,intron CG44153 -,CG34109 + chr2L 10109036 intron,intron CG44153 -,CG34109 + chr2L 10109112 intron,intron CG44153 -,CG34109 + chr2L_14_10105001 chr2L_10105001 RAL-406 349 chr2L 10125790 10125825 chr2L 10125935 10125970 18 144 6.5 3.0 4.8 3.1 180 chr2L 10125790 intron CG44153 - chr2L 10125880 intron CG44153 - chr2L 10125970 intron CG44153 - chr2L_18_10125001 chr2L_10125001 RAL-406 350 chr2L 10134121 10134146 chr2L 10134222 10134247 10 101 4.0 9.5 6.8 1.3 126 chr2L 10134121 intron CG44153 - chr2L 10134184 intron CG44153 - chr2L 10134247 intron CG44153 - chr2L_10_10130001 chr2L_10130001 RAL-406 351 chr2L 10138176 10138186 chr2L 10143438 10143445 Rt1c 4 5261 4.0 9.0 6.5 0.5 5269 chr2L 10138176 intron CG44153 - chr2L 10140810 intron CG44153 - chr2L 10143445 intron CG44153 - chr2L_4_10140001 chr2L_10140001 RAL-406 352 chr2L 10153194 10153232 chr2L 10153280 10153289 6 82 1.5 2.0 1.8 2.1 95 chr2L 10153194 intron,exon CG44153 -,CG4839 + chr2L 10153242 intron,intron CG44153 -,CG4839 + chr2L 10153289 intron,intron CG44153 -,CG4839 + chr2L_6_10150001 chr2L_10150001 RAL-406 353 chr2L 10156300 10156350 chr2L 10163790 10163830 blood 4 7484 4.0 5.5 4.8 0.7 7530 chr2L 10156300 intron,3` UTR CG44153 -,CG4839 + chr2L 10160065 intron CG44153 - chr2L 10163830 intron CG44153 - chr2L_4_10160001 chr2L_10160001 RAL-406 354 chr2L 10176711 10176749 chr2L 10176938 10176991 28 236 51.0 52.5 51.8 0.5 280 chr2L 10176711 intron CG44153 - chr2L 10176851 intron CG44153 - chr2L 10176991 intron CG44153 - chr2L_28_10175001 chr2L_10175001 RAL-406 355 chr2L 10185492 10185517 chr2L 10185605 10185630 14 112 2.0 2.5 2.2 4.4 138 chr2L 10185492 intron Sur - chr2L 10185561 intron Sur - chr2L 10185630 intron Sur - chr2L_14_10185001 chr2L_10185001 RAL-406 356 chr2L 10276178 10276226 chr2L 10276276 10276324 10 96 5.5 4.0 4.8 1.7 146 chr2L 10276178 intron Utx - chr2L 10276251 intron Utx - chr2L 10276324 intron Utx - chr2L_10_10275001 chr2L_10275001 RAL-406 357 chr2L 10281655 10281687 chr2L 10281770 10281813 6 116 0.0 3.0 1.5 2.4 158 chr2L 10281655 intergenic CG5604 - chr2L 10281734 intergenic CG5604 - chr2L 10281813 intergenic CG5604 - chr2L_6_10280001 chr2L_10280001 RAL-406 358 chr2L 10294681 10294688 chr2L 10294787 10294794 4 106 0.0 12.0 6.0 0.6 113 chr2L 10294681 intron Hand - chr2L 10294738 intron Hand - chr2L 10294794 intron Hand - chr2L_4_10290001 chr2L_10290001 RAL-406 359 chr2L 10348365 10348414 chr2L 10348468 10348498 18 101 5.0 3.0 4.0 3.6 133 chr2L 10348365 intron CG34367 - chr2L 10348432 intron CG34367 - chr2L 10348498 intron CG34367 - chr2L_18_10345001 chr2L_10345001 RAL-406 360 chr2L 10458086 10458099 chr2L 10458367 10458380 7 281 4.0 0.0 2.0 2.3 294 chr2L 10458086 intron LM408 + chr2L 10458233 intron LM408 + chr2L 10458380 intron LM408 + chr2L_7_10455001 chr2L_10455001 RAL-406 361 chr2L 10500037 10500081 chr2L 10500143 10500187 27 105 3.5 3.0 3.2 6.4 150 chr2L 10500037 intron Myo31DF - chr2L 10500112 intron Myo31DF - chr2L 10500187 intron Myo31DF - chr2L_27_10500001 chr2L_10500001 RAL-406 362 chr2L 10531603 10531620 chr2L 10531713 10531732 7 110 0.0 8.0 4.0 1.4 129 chr2L 10531603 3` UTR Lip4 + chr2L 10531668 3` UTR Lip4 + chr2L 10531732 3` UTR Lip4 + chr2L_7_10530001 chr2L_10530001 RAL-406 363 chr2L 10589051 10589081 chr2L 10589147 10589177 17 95 6.5 8.0 7.2 2.1 126 chr2L 10589051 intron Trim9 + chr2L 10589114 intron Trim9 + chr2L 10589177 intron Trim9 + chr2L_17_10585001 chr2L_10585001 RAL-406 364 chr2L 10592822 10592870 chr2L 10600504 10600552 opus 19 7677 2.5 6.5 4.5 3.5 7730 chr2L 10592822 intron Trim9 + chr2L 10596687 intron Trim9 + chr2L 10600552 intron Trim9 + chr2L_19_10595001 chr2L_10595001 RAL-406 365 chr2L 10603239 10603248 chr2L 10603362 10603371 4 123 4.5 8.0 6.2 0.6 132 chr2L 10603239 intron Trim9 + chr2L 10603305 intron Trim9 + chr2L 10603371 intron Trim9 + chr2L_4_10600001 chr2L_10600001 RAL-406 366 chr2L 10603255 10603260 chr2L 10603332 10603383 4 102 3.5 4.5 4.0 0.8 128 chr2L 10603255 intron Trim9 + chr2L 10603319 intron Trim9 + chr2L 10603383 intron Trim9 + chr2L_4_10600001 chr2L_10600001 RAL-406 367 chr2L 10604175 10604197 chr2L 10604279 10604279 5 99 12.0 0.0 6.0 0.7 104 chr2L 10604175 intron Trim9 + chr2L 10604227 intron Trim9 + chr2L 10604279 intron Trim9 + chr2L_5_10600001 chr2L_10600001 RAL-406 368 chr2L 10653250 10653296 chr2L 10653366 10653412 10 115 2.5 5.5 4.0 2.0 162 chr2L 10653250 exon CG17098 + chr2L 10653331 intron CG17098 + chr2L 10653412 intron CG17098 + chr2L_10_10650001 chr2L_10650001 RAL-406 369 chr2L 10656576 10656607 chr2L 10656672 10656703 19 95 4.0 7.0 5.5 2.9 127 chr2L 10656576 intergenic not near genes chr2L 10656640 intergenic not near genes chr2L 10656703 intergenic not near genes chr2L_19_10655001 chr2L_10655001 RAL-406 370 chr2L 10668577 10668619 chr2L 10668671 10668693 12 96 4.5 3.0 3.8 2.5 116 chr2L 10668577 intron CG31871 + chr2L 10668635 intron CG31871 + chr2L 10668693 exon CG31871 + chr2L_12_10665001 chr2L_10665001 RAL-406 371 chr2L 10683426 10683479 chr2L 10683525 10683578 14 98 3.5 0.0 1.8 5.0 152 chr2L 10683426 3` UTR CG7299 - chr2L 10683502 3` UTR CG7299 - chr2L 10683578 3` UTR CG7299 - chr2L_14_10680001 chr2L_10680001 RAL-406 372 chr2L 10704927 10704943 chr2L 10705016 10705053 4 107 5.0 2.5 3.8 0.8 126 chr2L 10704927 intron,3` UTR Lip2 -,CG6415 + chr2L 10704990 intron Lip2 - chr2L 10705053 exon Lip2 - chr2L_4_10700001 chr2L_10700001 RAL-406 373 chr2L 10705458 10705480 chr2L 10705540 10705568 10 93 2.0 6.0 4.0 2.0 110 chr2L 10705458 exon Lip2 - chr2L 10705513 intron Lip2 - chr2L 10705568 intron Lip2 - chr2L_10_10705001 chr2L_10705001 RAL-406 374 chr2L 10727266 10727292 chr2L 10727397 10727416 8 128 6.0 0.0 3.0 2.0 150 chr2L 10727266 intron CG6431 + chr2L 10727341 intron CG6431 + chr2L 10727416 intron CG6431 + chr2L_8_10725001 chr2L_10725001 RAL-406 375 chr2L 10793299 10793344 chr2L 10793394 10793441 17 96 7.5 4.0 5.8 2.5 142 chr2L 10793299 intron CG31869 - chr2L 10793370 intron CG31869 - chr2L 10793441 intron CG31869 - chr2L_17_10790001 chr2L_10790001 RAL-406 376 chr2L 10803754 10803807 chr2L 10803859 10803911 22 102 2.0 7.5 4.8 3.8 157 chr2L 10803754 intergenic not near genes chr2L 10803832 intergenic Nos - chr2L 10803911 intergenic Nos - chr2L_22_10800001 chr2L_10800001 RAL-406 377 chr2L 10836742 10836776 chr2L 10836841 10836874 6 97 8.5 7.5 8.0 0.7 132 chr2L 10836742 intron Nos - chr2L 10836808 intron Nos - chr2L 10836874 intron Nos - chr2L_6_10835001 chr2L_10835001 RAL-406 378 chr2L 10850944 10850989 chr2L 10851044 10851091 7 102 3.0 0.0 1.5 2.8 147 chr2L 10850944 intron CG43129 + chr2L 10851018 intron CG43129 + chr2L 10851091 intron CG43129 + chr2L_7_10850001 chr2L_10850001 RAL-406 379 chr2L 10852151 10852167 chr2L 10852260 10852276 6 107 13.0 13.0 13.0 0.4 125 chr2L 10852151 intron CG43129 + chr2L 10852214 intron CG43129 + chr2L 10852276 intron CG43129 + chr2L_6_10850001 chr2L_10850001 RAL-406 380 chr2L 10852169 10852180 chr2L 10852257 10852289 9 104 11.5 13.0 12.2 0.7 120 chr2L 10852169 intron CG43129 + chr2L 10852229 intron CG43129 + chr2L 10852289 intron CG43129 + chr2L_9_10850001 chr2L_10850001 RAL-406 381 chr2L 10862842 10862870 chr2L 10864462 10864493 Rt1c 5 1627 4.5 9.0 6.8 0.6 1651 chr2L 10862842 3` UTR CR43807 - chr2L 10863668 intron CR43807 - chr2L 10864493 3` UTR CR43807 - chr2L_5_10860001 chr2L_10860001 RAL-406 382 chr2L 10946939 10946976 chr2L 10956174 10956176 roo 8 9229 1.0 5.5 3.2 1.9 9237 chr2L 10946939 intron dpr2 - chr2L 10951558 intron dpr2 - chr2L 10956176 intron dpr2 - chr2L_8_10950001 chr2L_10950001 RAL-406 383 chr2L 11169449 11169503 chr2L 11169604 11169658 19 154 6.0 5.0 5.5 2.9 209 chr2L 11169449 intron Ca-beta - chr2L 11169554 intron Ca-beta - chr2L 11169658 intron Ca-beta - chr2L_19_11165001 chr2L_11165001 RAL-406 384 chr2L 11292354 11292408 chr2L 11292456 11292510 21 100 7.5 5.5 6.5 2.8 156 chr2L 11292354 intergenic not near genes chr2L 11292432 intergenic not near genes chr2L 11292510 intergenic not near genes chr2L_21_11290001 chr2L_11290001 RAL-406 385 chr2L 11298811 11298839 chr2L 11298898 11298936 10 95 6.0 5.0 5.5 1.5 125 chr2L 11298811 intergenic not near genes chr2L 11298874 intergenic not near genes chr2L 11298936 intergenic not near genes chr2L_10_11295001 chr2L_11295001 RAL-406 386 chr2L 11298844 11298853 chr2L 11298941 11298950 4 97 3.5 5.5 4.5 0.7 106 chr2L 11298844 intergenic not near genes chr2L 11298897 intergenic not near genes chr2L 11298950 intergenic not near genes chr2L_4_11295001 chr2L_11295001 RAL-406 387 chr2L 11361257 11361295 chr2L 11361594 11361632 16 333 5.0 9.0 7.0 2.0 375 chr2L 11361257 intron salr + chr2L 11361444 intron salr + chr2L 11361632 intron salr + chr2L_16_11360001 chr2L_11360001 RAL-406 388 chr2L 11450102 11450156 chr2L 11450208 11450237 12 95 0.0 3.5 1.8 4.3 135 chr2L 11450102 intergenic not near genes chr2L 11450170 intergenic not near genes chr2L 11450237 intergenic not near genes chr2L_12_11450001 chr2L_11450001 RAL-406 389 chr2L 11485669 11485703 chr2L 11485764 11485794 19 95 3.5 0.5 2.0 6.3 125 chr2L 11485669 exon,5` UTR CG43355 +,sala + chr2L 11485732 3` UTR,5` UTR CG43355 +,sala + chr2L 11485794 intron,intron CG43355 +,sala + chr2L_19_11485001 chr2L_11485001 RAL-406 390 chr2L 11536693 11536717 chr2L 11536794 11536797 5 97 3.0 0.0 1.5 2.0 104 chr2L 11536693 exon CG43438 + chr2L 11536745 3` UTR CG43438 + chr2L 11536797 3` UTR CG43438 + chr2L_5_11535001 chr2L_11535001 RAL-406 391 chr2L 11537961 11537980 chr2L 11538074 11538093 6 110 7.0 2.5 4.8 1.0 132 chr2L 11537961 intergenic not near genes chr2L 11538027 intergenic not near genes chr2L 11538093 intergenic not near genes chr2L_6_11535001 chr2L_11535001 RAL-406 392 chr2L 11540570 11540613 chr2L 11547992 11548030 Tabor 15 7421 10.5 9.5 10.0 1.4 7460 chr2L 11540570 intergenic not near genes chr2L 11544300 intergenic not near genes chr2L 11548030 intergenic not near genes chr2L_15_11540001 chr2L_11540001 RAL-406 393 chr2L 11563632 11563668 chr2L 11568840 11568892 copia 7 5220 4.5 7.0 5.8 1.0 5260 chr2L 11563632 intergenic not near genes chr2L 11566262 intergenic not near genes chr2L 11568892 intergenic not near genes chr2L_7_11565001 chr2L_11565001 RAL-406 394 chr2L 11618534 11618578 chr2L 11618645 11618664 17 106 5.0 5.0 5.0 2.8 130 chr2L 11618534 intron kek2 + chr2L 11618599 intron kek2 + chr2L 11618664 intron kek2 + chr2L_17_11615001 chr2L_11615001 RAL-406 395 chr2L 11633153 11633187 chr2L 11633275 11633309 4 117 2.5 6.0 4.2 0.8 156 chr2L 11633153 intergenic not near genes chr2L 11633231 intergenic not near genes chr2L 11633309 intergenic not near genes chr2L_4_11630001 chr2L_11630001 RAL-406 396 chr2L 11713486 11713526 chr2L 11720974 11721014 blood 6 7488 7.5 5.5 6.5 0.8 7528 chr2L 11713486 intergenic not near genes chr2L 11717250 intergenic not near genes chr2L 11721014 intergenic CR44143 + chr2L_6_11715001 chr2L_11715001 RAL-406 397 chr2L 11713527 11713536 chr2L 11720973 11721024 blood 4 7478 6.5 5.5 6.0 0.6 7497 chr2L 11713527 intergenic not near genes chr2L 11717276 intergenic not near genes chr2L 11721024 intergenic CR44143 + chr2L_4_11715001 chr2L_11715001 RAL-406 398 chr2L 11726801 11726818 chr2L 11726894 11726912 6 96 2.5 2.5 2.5 1.7 111 chr2L 11726801 intergenic not near genes chr2L 11726856 intergenic not near genes chr2L 11726912 intergenic not near genes chr2L_6_11725001 chr2L_11725001 RAL-406 399 chr2L 11752992 11753041 chr2L 11753093 11753148 15 105 4.5 0.0 2.2 4.7 156 chr2L 11752992 3` UTR CG42470 - chr2L 11753070 3` UTR CG42470 - chr2L 11753148 3` UTR CG42470 - chr2L_15_11750001 chr2L_11750001 RAL-406 400 chr2L 11841349 11841390 chr2L 11841446 11841488 11 98 7.5 4.5 6.0 1.6 139 chr2L 11841349 intron Pde1c - chr2L 11841418 intron Pde1c - chr2L 11841488 intron Pde1c - chr2L_11_11840001 chr2L_11840001 RAL-406 401 chr2L 11874900 11874928 chr2L 11875001 11875024 7 97 0.5 6.5 3.5 1.6 124 chr2L 11874900 intron Pde1c - chr2L 11874962 intron Pde1c - chr2L 11875024 intron Pde1c - chr2L_7_11870001 chr2L_11870001 RAL-406 402 chr2L 11892525 11892820 chr2L 11892634 11892893 14 102 3.5 4.0 3.8 2.9 368 chr2L 11892525 intron Pde1c - chr2L 11892709 intron Pde1c - chr2L 11892893 intron Pde1c - chr2L_14_11890001 chr2L_11890001 RAL-406 403 chr2L 11951312 11951366 chr2L 11951429 11951483 16 117 4.0 1.5 2.8 4.2 171 chr2L 11951312 intergenic not near genes chr2L 11951398 intergenic not near genes chr2L 11951483 intergenic not near genes chr2L_16_11950001 chr2L_11950001 RAL-406 404 chr2L 11951955 11951994 chr2L 11952063 11952101 18 106 0.5 4.0 2.2 5.6 146 chr2L 11951955 intergenic CR43314 - chr2L 11952028 intergenic CR43314 - chr2L 11952101 intergenic CR43314 - chr2L_18_11950001 chr2L_11950001 RAL-406 405 chr2L 11953515 11953527 chr2L 11953617 11953629 7 102 6.5 4.5 5.5 1.1 114 chr2L 11953515 3` UTR CR43314 - chr2L 11953572 3` UTR CR43314 - chr2L 11953629 3` UTR CR43314 - chr2L_7_11950001 chr2L_11950001 RAL-406 406 chr2L 11953529 11953549 chr2L 11953616 11953651 7 100 1.0 4.0 2.5 2.0 122 chr2L 11953529 3` UTR CR43314 - chr2L 11953590 3` UTR CR43314 - chr2L 11953651 3` UTR CR43314 - chr2L_7_11950001 chr2L_11950001 RAL-406 407 chr2L 12067318 12067356 chr2L 12074380 12074428 297 16 7070 6.5 3.5 5.0 2.7 7110 chr2L 12067318 intergenic not near genes chr2L 12070873 intergenic not near genes chr2L 12074428 intergenic not near genes chr2L_16_12070001 chr2L_12070001 RAL-406 408 chr2L 12093180 12093184 chr2L 12093284 12093288 5 104 4.5 4.0 4.2 1.0 108 chr2L 12093180 intron Pex19 + chr2L 12093234 intron Pex19 + chr2L 12093288 intron Pex19 + chr2L_5_12090001 chr2L_12090001 RAL-406 409 chr2L 12109208 12109239 chr2L 12109308 12109343 17 104 0.5 4.0 2.2 5.3 135 chr2L 12109208 intergenic Rab6 -,Phae1 + chr2L 12109276 intergenic Phae1 +,Rab6 - chr2L 12109343 intergenic Phae1 +,Rab6 - chr2L_17_12105001 chr2L_12105001 RAL-406 410 chr2L 12112037 12112044 chr2L 12112135 12112175 7 124 0.0 10.0 5.0 1.2 138 chr2L 12112037 3` UTR Phae2 + chr2L 12112106 3` UTR Phae2 + chr2L 12112175 3` UTR Phae2 + chr2L_7_12110001 chr2L_12110001 RAL-406 411 chr2L 12116846 12116889 chr2L 12116946 12116994 14 102 0.5 4.0 2.2 4.4 148 chr2L 12116846 intron CG17211 + chr2L 12116920 intron CG17211 + chr2L 12116994 intron CG17211 + chr2L_14_12115001 chr2L_12115001 RAL-406 412 chr2L 12123963 12124014 chr2L 12124127 12124178 14 159 2.5 5.5 4.0 2.8 215 chr2L 12123963 intron CG17211 + chr2L 12124070 intron CG17211 + chr2L 12124178 intron CG17211 + chr2L_14_12120001 chr2L_12120001 RAL-406 413 chr2L 12132704 12132749 chr2L 12132810 12132852 28 104 0.5 1.5 1.0 14.0 148 chr2L 12132704 intron rho-6 - chr2L 12132778 intron rho-6 - chr2L 12132852 intron rho-6 - chr2L_28_12130001 chr2L_12130001 RAL-406 414 chr2L 12179757 12179790 chr2L 12179858 12179896 16 102 3.5 2.0 2.8 4.2 139 chr2L 12179757 intron aret + chr2L 12179826 intron aret + chr2L 12179896 intron aret + chr2L_16_12175001 chr2L_12175001 RAL-406 415 chr2L 12229563 12229571 chr2L 12229660 12229667 4 96 8.5 0.5 4.5 0.7 104 chr2L 12229563 intron aret + chr2L 12229615 intron aret + chr2L 12229667 intron aret + chr2L_4_12225001 chr2L_12225001 RAL-406 416 chr2L 12229572 12229608 chr2L 12229654 12229705 15 92 2.5 0.5 1.5 6.0 133 chr2L 12229572 intron aret + chr2L 12229638 intron aret + chr2L 12229705 intron aret + chr2L_15_12225001 chr2L_12225001 RAL-406 417 chr2L 12239047 12239059 chr2L 12239145 12239167 17 107 13.5 7.0 10.2 1.5 120 chr2L 12239047 intron aret + chr2L 12239107 intron aret + chr2L 12239167 intron aret + chr2L_17_12235001 chr2L_12235001 RAL-406 418 chr2L 12239061 12239088 chr2L 12239144 12239196 14 102 7.0 7.0 7.0 1.8 135 chr2L 12239061 intron aret + chr2L 12239128 intron aret + chr2L 12239196 intron aret + chr2L_14_12235001 chr2L_12235001 RAL-406 419 chr2L 12249885 12249939 chr2L 12250059 12250102 11 169 8.5 0.0 4.2 2.1 217 chr2L 12249885 intron aret + chr2L 12249994 intron aret + chr2L 12250102 intron aret + chr2L_11_12245001 chr2L_12245001 RAL-406 420 chr2L 12269833 12269874 chr2L 12270056 12270094 29 232 7.0 7.5 7.2 3.5 261 chr2L 12269833 intron aret + chr2L 12269964 intron aret + chr2L 12270094 intron aret + chr2L_29_12265001 chr2L_12265001 RAL-406 421 chr2L 12294232 12294278 chr2L 12294334 12294380 21 100 3.0 8.0 5.5 3.2 148 chr2L 12294232 intron aret + chr2L 12294306 intron aret + chr2L 12294380 intron aret + chr2L_21_12290001 chr2L_12290001 RAL-406 422 chr2L 12299610 12299643 chr2L 12299687 12299718 6 86 4.0 4.0 4.0 1.2 108 chr2L 12299610 intron aret + chr2L 12299664 intron aret + chr2L 12299718 intron aret + chr2L_6_12295001 chr2L_12295001 RAL-406 423 chr2L 12337262 12337314 chr2L 12337370 12337395 20 105 3.0 0.5 1.8 7.1 133 chr2L 12337262 intergenic not near genes chr2L 12337328 intergenic not near genes chr2L 12337395 intergenic not near genes chr2L_20_12335001 chr2L_12335001 RAL-406 424 chr2L 12418864 12418904 chr2L 12418964 12419013 10 111 6.0 3.0 4.5 1.8 149 chr2L 12418864 intron vir-1 - chr2L 12418938 intron vir-1 - chr2L 12419013 intron vir-1 - chr2L_10_12415001 chr2L_12415001 RAL-406 425 chr2L 12433991 12434017 chr2L 12434084 12434098 6 86 7.5 8.0 7.8 0.7 107 chr2L 12433991 5` UTR SC35 - chr2L 12434044 intergenic SC35 -,Elf + chr2L 12434098 intergenic SC35 -,Elf + chr2L_6_12430001 chr2L_12430001 RAL-406 426 chr2L 12434018 12434041 chr2L 12434083 12434120 12 88 7.5 8.0 7.8 1.4 102 chr2L 12434018 5` UTR SC35 - chr2L 12434069 intergenic SC35 -,Elf + chr2L 12434120 intergenic SC35 -,Elf + chr2L_12_12430001 chr2L_12430001 RAL-406 427 chr2L 12487875 12487880 chr2L 12487976 12487977 4 99 11.5 5.0 8.2 0.4 102 chr2L 12487875 intron bun - chr2L 12487926 intron bun - chr2L 12487977 intron bun - chr2L_4_12485001 chr2L_12485001 RAL-406 428 chr2L 12487885 12487891 chr2L 12487971 12487992 6 93 10.5 5.5 8.0 0.7 107 chr2L 12487885 intron bun - chr2L 12487938 intron bun - chr2L 12487992 intron bun - chr2L_6_12485001 chr2L_12485001 RAL-406 429 chr2L 12487892 12487919 chr2L 12487966 12488020 14 96 4.5 4.5 4.5 2.5 128 chr2L 12487892 intron bun - chr2L 12487956 intron bun - chr2L 12488020 intron bun - chr2L_14_12485001 chr2L_12485001 RAL-406 430 chr2L 12490265 12490297 chr2L 12490361 12490393 13 90 1.0 4.0 2.5 3.7 128 chr2L 12490265 intron bun - chr2L 12490329 intron bun - chr2L 12490393 intron bun - chr2L_13_12490001 chr2L_12490001 RAL-406 431 chr2L 12490930 12490942 chr2L 12491037 12491063 7 117 3.0 6.5 4.8 1.2 133 chr2L 12490930 intron bun - chr2L 12490996 intron bun - chr2L 12491063 intron bun - chr2L_7_12490001 chr2L_12490001 RAL-406 432 chr2L 12491397 12491507 chr2L 12491505 12491624 16 119 0.0 0.0 0.0 16.0 227 chr2L 12491397 intron bun - chr2L 12491510 intron bun - chr2L 12491624 intron bun - chr2L_16_12490001 chr2L_12490001 RAL-406 433 chr2L 12492675 12492681 chr2L 12492776 12492782 5 101 2.5 0.0 1.2 2.3 107 chr2L 12492675 intron bun - chr2L 12492728 intron bun - chr2L 12492782 intron bun - chr2L_5_12490001 chr2L_12490001 RAL-406 434 chr2L 12558330 12558353 chr2L 12565450 12565502 HMS-Beagle 4 7138 4.0 5.5 4.8 0.7 7172 chr2L 12558330 intergenic not near genes chr2L 12561916 intergenic not near genes chr2L 12565502 intergenic not near genes chr2L_4_12560001 chr2L_12560001 RAL-406 435 chr2L 12567451 12567460 chr2L 12567570 12567579 5 119 16.5 10.5 13.5 0.3 128 chr2L 12567451 intergenic not near genes chr2L 12567515 intergenic not near genes chr2L 12567579 intergenic not near genes chr2L_5_12565001 chr2L_12565001 RAL-406 436 chr2L 12570348 12570375 chr2L 12570434 12570484 4 103 1.5 0.0 0.8 2.2 136 chr2L 12570348 intergenic CR44598 - chr2L 12570416 intergenic CR44598 - chr2L 12570484 intergenic CR44598 - chr2L_4_12570001 chr2L_12570001 RAL-406 437 chr2L 12647185 12647245 chr2L 12647293 12647355 4 108 0.0 5.0 2.5 1.1 170 chr2L 12647185 intergenic not near genes chr2L 12647270 intergenic not near genes chr2L 12647355 intergenic not near genes chr2L_4_12645001 chr2L_12645001 RAL-406 438 chr2L 12653012 12653060 chr2L 12653109 12653157 8 95 5.0 5.5 5.2 1.3 145 chr2L 12653012 intergenic not near genes chr2L 12653084 intergenic not near genes chr2L 12653157 intergenic not near genes chr2L_8_12650001 chr2L_12650001 RAL-406 439 chr2L 12659686 12659721 chr2L 12659812 12659817 4 118 8.5 0.0 4.2 0.8 131 chr2L 12659686 intron pdm2 + chr2L 12659752 intron pdm2 + chr2L 12659817 intron pdm2 + chr2L_4_12655001 chr2L_12655001 RAL-406 440 chr2L 12677757 12677803 chr2L 12677858 12677904 28 98 12.0 7.5 9.8 2.6 147 chr2L 12677757 intron pdm2 + chr2L 12677830 intron pdm2 + chr2L 12677904 intron pdm2 + chr2L_28_12675001 chr2L_12675001 RAL-406 441 chr2L 12693825 12693836 chr2L 12693922 12693933 10 97 14.0 1.0 7.5 1.2 108 chr2L 12693825 exon CG6153 + chr2L 12693879 3` UTR,3` UTR CG6153 +,CG5780 - chr2L 12693933 3` UTR,3` UTR CG6153 +,CG5780 - chr2L_10_12690001 chr2L_12690001 RAL-406 442 chr2L 12693837 12693858 chr2L 12693920 12693955 18 94 9.5 1.0 5.2 2.9 118 chr2L 12693837 exon CG6153 + chr2L 12693896 3` UTR,3` UTR CG6153 +,CG5780 - chr2L 12693955 3` UTR CG5780 - chr2L_18_12690001 chr2L_12690001 RAL-406 443 chr2L 12728901 12728945 chr2L 12729162 12729186 pogo 10 258 5.5 3.5 4.5 1.8 285 chr2L 12728901 intron MRP + chr2L 12729044 intron MRP + chr2L 12729186 exon MRP + chr2L_10_12725001 chr2L_12725001 RAL-406 444 chr2L 12731038 12731048 chr2L 12735825 12735834 F-element 5 4787 6.0 6.0 6.0 0.7 4796 chr2L 12731038 intron MRP + chr2L 12733436 intron MRP + chr2L 12735834 intron MRP + chr2L_5_12730001 chr2L_12730001 RAL-406 445 chr2L 12731049 12731087 chr2L 12735821 12735874 F-element 12 4782 4.0 4.5 4.2 2.3 4825 chr2L 12731049 intron MRP + chr2L 12733462 intron MRP + chr2L 12735874 intron MRP + chr2L_12_12730001 chr2L_12730001 RAL-406 446 chr2L 12739156 12739183 chr2L 12743953 12743980 Doc 9 4797 4.0 5.5 4.8 1.6 4824 chr2L 12739156 exon MRP + chr2L 12741568 intron MRP + chr2L 12743980 exon MRP + chr2L_9_12740001 chr2L_12740001 RAL-406 447 chr2L 12763806 12763869 chr2L 12764038 12764089 BS 5 225 0.5 0.0 0.2 4.2 283 chr2L 12763806 intergenic not near genes chr2L 12763948 intergenic not near genes chr2L 12764089 intergenic not near genes chr2L_5_12760001 chr2L_12760001 RAL-406 448 chr2L 12766740 12766779 chr2L 12766837 12766877 15 95 4.5 5.0 4.8 2.6 137 chr2L 12766740 intergenic not near genes chr2L 12766808 intergenic not near genes chr2L 12766877 intergenic not near genes chr2L_15_12765001 chr2L_12765001 RAL-406 449 chr2L 12781785 12781815 chr2L 12789248 12789257 Quasimodo 12 7459 6.0 4.5 5.2 1.9 7472 chr2L 12781785 intergenic not near genes chr2L 12785521 intergenic not near genes chr2L 12789257 intergenic not near genes chr2L_12_12785001 chr2L_12785001 RAL-406 450 chr2L 12791592 12791633 chr2L 12795282 12795323 F-element 22 3689 3.5 9.5 6.5 2.9 3731 chr2L 12791592 intergenic not near genes chr2L 12793458 intergenic not near genes chr2L 12795323 intergenic not near genes chr2L_22_12790001 chr2L_12790001 RAL-406 451 chr2L 12861696 12861716 chr2L 12863167 12863203 hobo 10 1480 3.0 5.5 4.2 1.9 1507 chr2L 12861696 intergenic not near genes chr2L 12862450 intergenic not near genes chr2L 12863203 intergenic not near genes chr2L_10_12860001 chr2L_12860001 RAL-406 452 chr2L 12863937 12863947 chr2L 12864005 12864052 7 95 0.0 6.5 3.2 1.7 115 chr2L 12863937 intergenic not near genes chr2L 12863994 intergenic not near genes chr2L 12864052 intergenic not near genes chr2L_7_12860001 chr2L_12860001 RAL-406 453 chr2L 12896790 12896837 chr2L 12896899 12896941 6 106 7.5 1.0 4.2 1.2 151 chr2L 12896790 intergenic not near genes chr2L 12896866 intergenic not near genes chr2L 12896941 intergenic not near genes chr2L_6_12895001 chr2L_12895001 RAL-406 454 chr2L 12930475 12930498 chr2L 12930571 12930593 5 93 0.5 9.5 5.0 0.8 118 chr2L 12930475 intergenic not near genes chr2L 12930534 intergenic not near genes chr2L 12930593 intergenic not near genes chr2L_5_12930001 chr2L_12930001 RAL-406 455 chr2L 12933830 12933880 chr2L 12941317 12941367 blood 10 7482 6.5 3.5 5.0 1.7 7537 chr2L 12933830 intergenic not near genes chr2L 12937598 intergenic not near genes chr2L 12941367 intergenic not near genes chr2L_10_12935001 chr2L_12935001 RAL-406 456 chr2L 12994508 12994514 chr2L 12994606 12994613 4 99 5.0 8.0 6.5 0.5 105 chr2L 12994508 intron CG12404 - chr2L 12994560 intron CG12404 - chr2L 12994613 intron CG12404 - chr2L_4_12990001 chr2L_12990001 RAL-406 457 chr2L 13036228 13036269 chr2L 13036490 13036531 X-element 22 261 2.5 7.5 5.0 3.7 303 chr2L 13036228 intron CG9932 - chr2L 13036380 intron CG9932 - chr2L 13036531 intron CG9932 - chr2L_22_13035001 chr2L_13035001 RAL-406 458 chr2L 13147759 13147776 chr2L 13147824 13147842 12 88 3.5 5.0 4.2 2.3 83 chr2L 13147759 intergenic not near genes chr2L 13147800 intergenic not near genes chr2L 13147842 intergenic not near genes chr2L_12_13145001 chr2L_13145001 RAL-406 459 chr2L 13156447 13156470 chr2L 13156577 13156600 9 129 3.5 5.0 4.2 1.7 153 chr2L 13156447 intergenic not near genes chr2L 13156524 intergenic not near genes chr2L 13156600 intergenic not near genes chr2L_9_13155001 chr2L_13155001 RAL-406 460 chr2L 13292730 13292751 chr2L 13292800 13292823 8 85 3.0 2.5 2.8 2.1 93 chr2L 13292730 intron CG31729 + chr2L 13292776 intron CG31729 + chr2L 13292823 intron CG31729 + chr2L_8_13290001 chr2L_13290001 RAL-406 461 chr2L 13398697 13398751 chr2L 13398797 13398851 23 99 5.5 3.5 4.5 4.2 154 chr2L 13398697 intergenic CG10859 -,CR44600 -,CG7110 + chr2L 13398774 intergenic CR44600 -,CG10859 -,CG7110 + chr2L 13398851 intergenic CR44600 -,CG7110 +,CG10859 - chr2L_23_13395001 chr2L_13395001 RAL-406 462 chr2L 13405630 13405679 chr2L 13410444 13410466 Doc 17 4809 3.0 7.0 5.0 2.8 4836 chr2L 13405630 exon CG7110 + chr2L 13408048 intron CG7110 + chr2L 13410466 intron CG7110 + chr2L_17_13405001 chr2L_13405001 RAL-406 463 chr2L 13412309 13412352 chr2L 13412456 13412499 21 145 5.5 10.5 8.0 2.3 190 chr2L 13412309 intergenic CG16848 + chr2L 13412404 intergenic CG16848 + chr2L 13412499 intergenic CG16848 + chr2L_21_13410001 chr2L_13410001 RAL-406 464 chr2L 13449445 13449492 chr2L 13456901 13456937 Quasimodo 14 7455 5.0 7.5 6.2 1.9 7492 chr2L 13449445 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453191 intron CG42784 + chr2L 13456937 intron CG42784 + chr2L_14_13450001 chr2L_13450001 RAL-406 465 chr2L 13481443 13481452 chr2L 13482063 13482079 jockey 5 625 10.0 5.5 7.8 0.6 636 chr2L 13481443 intron CG42784 + chr2L 13481761 intron CG42784 + chr2L 13482079 intron CG42784 + chr2L_5_13480001 chr2L_13480001 RAL-406 466 chr2L 13481454 13481466 chr2L 13482056 13482081 jockey 8 616 7.5 5.0 6.2 1.1 627 chr2L 13481454 intron CG42784 + chr2L 13481768 intron CG42784 + chr2L 13482081 intron CG42784 + chr2L_8_13480001 chr2L_13480001 RAL-406 467 chr2L 13522269 13522289 chr2L 13527595 13527602 Transpac 7 5321 4.0 8.5 6.2 1.0 5333 chr2L 13522269 intron B4 - chr2L 13524936 intron B4 - chr2L 13527602 intron B4 - chr2L_7_13520001 chr2L_13520001 RAL-406 468 chr2L 13560381 13560421 chr2L 13565222 13565259 F-element 21 4840 15.0 6.5 10.8 1.8 4878 chr2L 13560381 intron kuz + chr2L 13562820 intron kuz + chr2L 13565259 intron kuz + chr2L_21_13560001 chr2L_13560001 RAL-406 469 chr2L 13607630 13607650 chr2L 13607728 13607728 5 91 4.0 12.5 8.2 0.5 98 chr2L 13607630 intron kuz + chr2L 13607679 intron kuz + chr2L 13607728 intron kuz + chr2L_5_13605001 chr2L_13605001 RAL-406 470 chr2L 13622194 13622224 chr2L 13622318 13622327 4 117 2.0 10.0 6.0 0.6 133 chr2L 13622194 intron kuz + chr2L 13622260 intron kuz + chr2L 13622327 intron kuz + chr2L_4_13620001 chr2L_13620001 RAL-406 471 chr2L 13622233 13622235 chr2L 13622308 13622347 5 97 1.0 6.5 3.8 1.0 114 chr2L 13622233 intron kuz + chr2L 13622290 intron kuz + chr2L 13622347 intron kuz + chr2L_5_13620001 chr2L_13620001 RAL-406 472 chr2L 13666502 13666505 chr2L 13666606 13666609 4 104 12.5 0.0 6.2 0.6 107 chr2L 13666502 intron CG18507 + chr2L 13666556 intron CG18507 + chr2L 13666609 intron CG18507 + chr2L_4_13665001 chr2L_13665001 RAL-406 473 chr2L 13677920 13677962 chr2L 13678020 13678041 20 98 4.5 7.5 6.0 2.9 121 chr2L 13677920 3` UTR CG31814 - chr2L 13677980 3` UTR CG31814 - chr2L 13678041 3` UTR CG31814 - chr2L_20_13675001 chr2L_13675001 RAL-406 474 chr2L 13684279 13684284 chr2L 13684367 13684380 4 94 2.0 8.5 5.2 0.6 101 chr2L 13684279 intron CG31814 - chr2L 13684330 intron CG31814 - chr2L 13684380 intron CG31814 - chr2L_4_13680001 chr2L_13680001 RAL-406 475 chr2L 13693408 13693423 chr2L 13693681 13693694 6 282 4.5 9.5 7.0 0.8 286 chr2L 13693408 intron CG31814 - chr2L 13693551 intron CG31814 - chr2L 13693694 intron CG31814 - chr2L_6_13690001 chr2L_13690001 RAL-406 476 chr2L 13713541 13713574 chr2L 13713637 13713670 15 94 4.0 6.5 5.2 2.4 129 chr2L 13713541 intron CG31814 - chr2L 13713606 intron CG31814 - chr2L 13713670 intron CG31814 - chr2L_15_13710001 chr2L_13710001 RAL-406 477 chr2L 13749193 13749203 chr2L 13749296 13749306 5 103 0.0 4.5 2.2 1.6 113 chr2L 13749193 intron,intron CR44846 +,TM9SF4 + chr2L 13749250 intron,intron CR44846 +,TM9SF4 + chr2L 13749306 intron,intron CR44846 +,TM9SF4 + chr2L_5_13745001 chr2L_13745001 RAL-406 478 chr2L 13761797 13761811 chr2L 13762928 13762942 Doc 5 1131 15.0 7.0 11.0 0.4 1145 chr2L 13761797 intron TM9SF4 + chr2L 13762370 intron TM9SF4 + chr2L 13762942 intron TM9SF4 + chr2L_5_13760001 chr2L_13760001 RAL-406 479 chr2L 13833186 13833227 chr2L 13833286 13833308 13 96 5.0 4.0 4.5 2.4 122 chr2L 13833186 intergenic CG33649 -,DNApol-gamma35 -,RpII33 + chr2L 13833247 intergenic RpII33 +,CG33649 -,DNApol-gamma35 - chr2L 13833308 intergenic RpII33 +,CG33649 -,DNApol-gamma35 - chr2L_13_13830001 chr2L_13830001 RAL-406 480 chr2L 13836787 13836826 chr2L 13837003 13837037 16 213 8.0 6.0 7.0 2.0 250 chr2L 13836787 intron CenG1A + chr2L 13836912 intron CenG1A + chr2L 13837037 intron CenG1A + chr2L_16_13835001 chr2L_13835001 RAL-406 481 chr2L 13842113 13842162 chr2L 13842217 13842266 21 102 7.0 3.5 5.2 3.4 153 chr2L 13842113 intron CenG1A + chr2L 13842190 intron CenG1A + chr2L 13842266 intron CenG1A + chr2L_21_13840001 chr2L_13840001 RAL-406 482 chr2L 13852510 13852542 chr2L 13852606 13852629 6 93 1.5 2.0 1.8 2.1 119 chr2L 13852510 intron CenG1A + chr2L 13852570 intron CenG1A + chr2L 13852629 intron CenG1A + chr2L_6_13850001 chr2L_13850001 RAL-406 483 chr2L 13853075 13853117 chr2L 13862245 13862287 roo 20 9165 4.0 6.5 5.2 3.2 9212 chr2L 13853075 intron CenG1A + chr2L 13857681 intron CenG1A + chr2L 13862287 intron CenG1A + chr2L_20_13855001 chr2L_13855001 RAL-406 484 chr2L 13914792 13914835 chr2L 13914892 13914935 25 97 9.0 7.0 8.0 2.8 143 chr2L 13914792 5` UTR Ance-3 + chr2L 13914864 5` UTR Ance-3 + chr2L 13914935 5` UTR Ance-3 + chr2L_25_13910001 chr2L_13910001 RAL-406 485 chr2L 13988270 13988272 chr2L 13988377 13988379 4 107 14.5 10.0 12.2 0.3 109 chr2L 13988270 intron rk - chr2L 13988324 intron rk - chr2L 13988379 intron rk - chr2L_4_13985001 chr2L_13985001 RAL-406 486 chr2L 13988275 13988304 chr2L 13988372 13988401 11 104 3.5 9.0 6.2 1.5 126 chr2L 13988275 intron rk - chr2L 13988338 intron rk - chr2L 13988401 intron rk - chr2L_11_13985001 chr2L_13985001 RAL-406 487 chr2L 14021205 14021214 chr2L 14021313 14021322 8 108 7.5 7.5 7.5 0.9 117 chr2L 14021205 intergenic CR45352 - chr2L 14021264 intergenic CR45352 - chr2L 14021322 intergenic CR45352 - chr2L_8_14020001 chr2L_14020001 RAL-406 488 chr2L 14099095 14099136 chr2L 14099201 14099241 7 106 4.5 1.5 3.0 1.8 146 chr2L 14099095 intergenic not near genes chr2L 14099168 intergenic not near genes chr2L 14099241 intergenic not near genes chr2L_7_14095001 chr2L_14095001 RAL-406 489 chr2L 14118640 14118690 chr2L 14118759 14118809 18 114 7.0 2.0 4.5 3.3 169 chr2L 14118640 intergenic not near genes chr2L 14118724 intergenic not near genes chr2L 14118809 intergenic not near genes chr2L_18_14115001 chr2L_14115001 RAL-406 490 chr2L 14160669 14160718 chr2L 14160775 14160824 20 103 4.5 5.0 4.8 3.4 155 chr2L 14160669 intergenic CG17341 +,CG43332 - chr2L 14160746 intergenic CG17341 +,CG43332 - chr2L 14160824 intergenic CG17341 +,CG43332 - chr2L_20_14160001 chr2L_14160001 RAL-406 491 chr2L 14235724 14235729 chr2L 14235827 14235831 4 106 0.0 5.0 2.5 1.1 107 chr2L 14235724 5` UTR CR44728 + chr2L 14235778 5` UTR CR44728 + chr2L 14235831 5` UTR CR44728 + chr2L_4_14235001 chr2L_14235001 RAL-406 492 chr2L 14269562 14269587 chr2L 14269645 14269652 4 83 2.0 1.5 1.8 1.4 90 chr2L 14269562 intron wb + chr2L 14269607 intron wb + chr2L 14269652 intron wb + chr2L_4_14265001 chr2L_14265001 RAL-406 493 chr2L 14300164 14300201 chr2L 14300261 14300298 14 95 5.5 8.5 7.0 1.8 134 chr2L 14300164 intron wb + chr2L 14300231 intron wb + chr2L 14300298 intron wb + chr2L_14_14300001 chr2L_14300001 RAL-406 494 chr2L 14333607 14333643 chr2L 14335201 14335255 17 1602 22.5 20.5 21.5 0.8 1648 chr2L 14333607 exon ms(2)34Fe + chr2L 14334431 exon CG33090 + chr2L 14335255 intron CG33090 + chr2L_17_14330001 chr2L_14330001 RAL-406 495 chr2L 14374761 14374789 chr2L 14374871 14374900 23 109 7.0 5.0 6.0 3.3 139 chr2L 14374761 intergenic not near genes chr2L 14374830 intergenic not near genes chr2L 14374900 intergenic not near genes chr2L_23_14370001 chr2L_14370001 RAL-406 496 chr2L 14378638 14378657 chr2L 14378732 14378756 5 98 9.5 1.0 5.2 0.8 118 chr2L 14378638 3` UTR ppk - chr2L 14378697 3` UTR ppk - chr2L 14378756 3` UTR ppk - chr2L_5_14375001 chr2L_14375001 RAL-406 497 chr2L 14378661 14378678 chr2L 14378729 14378747 7 86 5.0 1.0 3.0 1.8 86 chr2L 14378661 3` UTR ppk - chr2L 14378704 3` UTR ppk - chr2L 14378747 3` UTR ppk - chr2L_7_14375001 chr2L_14375001 RAL-406 498 chr2L 14427489 14427523 chr2L 14427610 14427644 13 121 0.5 3.5 2.0 4.3 155 chr2L 14427489 intergenic not near genes chr2L 14427566 intergenic not near genes chr2L 14427644 intergenic not near genes chr2L_13_14425001 chr2L_14425001 RAL-406 499 chr2L 14465570 14465614 chr2L 14469053 14469106 hopper2 4 3492 8.0 0.0 4.0 0.8 3536 chr2L 14465570 intergenic not near genes chr2L 14467338 intergenic not near genes chr2L 14469106 intergenic not near genes chr2L_4_14465001 chr2L_14465001 RAL-406 500 chr2L 14555134 14555158 chr2L 14555227 14555257 10 98 3.5 4.5 4.0 2.0 123 chr2L 14555134 intergenic not near genes chr2L 14555196 intergenic not near genes chr2L 14555257 intergenic not near genes chr2L_10_14555001 chr2L_14555001 RAL-406 501 chr2L 14564691 14564734 chr2L 14564794 14564805 31 102 3.5 0.5 2.0 10.3 114 chr2L 14564691 intergenic not near genes chr2L 14564748 intergenic not near genes chr2L 14564805 intergenic not near genes chr2L_31_14560001 chr2L_14560001 RAL-406 502 chr2L 14588364 14588418 chr2L 14588538 14588582 24 168 4.5 4.0 4.2 4.6 218 chr2L 14588364 intergenic CG42680 - chr2L 14588473 intergenic CG42680 - chr2L 14588582 intergenic CG42680 - chr2L_24_14585001 chr2L_14585001 RAL-406 503 chr2L 14601958 14602002 chr2L 14602062 14602091 19 98 3.5 3.5 3.5 4.2 133 chr2L 14601958 exon osp - chr2L 14602024 intron osp - chr2L 14602091 intron osp - chr2L_19_14600001 chr2L_14600001 RAL-406 504 chr2L 14707188 14707238 chr2L 14707327 14707350 24 130 10.5 5.0 7.8 2.7 162 chr2L 14707188 intergenic not near genes chr2L 14707269 intergenic not near genes chr2L 14707350 intergenic not near genes chr2L_24_14705001 chr2L_14705001 RAL-406 505 chr2L 14707578 14707619 chr2L 14708593 14708644 18 1020 15.0 20.5 17.8 1.0 1066 chr2L 14707578 intergenic not near genes chr2L 14708111 intergenic not near genes chr2L 14708644 intergenic not near genes chr2L_18_14705001 chr2L_14705001 RAL-406 506 chr2L 14706735 14706766 chr2L 14708977 14709024 31 2244 59.0 54.5 56.8 0.5 2289 chr2L 14706735 intergenic not near genes chr2L 14707880 intergenic not near genes chr2L 14709024 intergenic not near genes chr2L_31_14705001 chr2L_14705001 RAL-406 507 chr2L 14754899 14754949 chr2L 14755028 14755038 25 125 3.5 6.5 5.0 4.2 139 chr2L 14754899 intergenic not near genes chr2L 14754968 intergenic not near genes chr2L 14755038 intergenic not near genes chr2L_25_14750001 chr2L_14750001 RAL-406 508 chr2L 14778463 14778488 chr2L 14778625 14778653 4 168 5.5 0.5 3.0 1.0 190 chr2L 14778463 intergenic not near genes chr2L 14778558 intergenic not near genes chr2L 14778653 intergenic not near genes chr2L_4_14775001 chr2L_14775001 RAL-406 509 chr2L 14787254 14787258 chr2L 14787349 14787356 4 96 16.0 4.5 10.2 0.4 102 chr2L 14787254 intergenic not near genes chr2L 14787305 intergenic not near genes chr2L 14787356 intergenic not near genes chr2L_4_14785001 chr2L_14785001 RAL-406 510 chr2L 14787259 14787293 chr2L 14787342 14787391 17 92 9.0 2.0 5.5 2.6 132 chr2L 14787259 intergenic not near genes chr2L 14787325 intergenic not near genes chr2L 14787391 intergenic not near genes chr2L_17_14785001 chr2L_14785001 RAL-406 511 chr2L 14803858 14803909 chr2L 14809080 14809132 copia 12 5214 5.5 7.0 6.2 1.7 5274 chr2L 14803858 intergenic not near genes chr2L 14806495 intergenic not near genes chr2L 14809132 intergenic not near genes chr2L_12_14805001 chr2L_14805001 RAL-406 512 chr2L 14840957 14841006 chr2L 14841065 14841073 17 101 4.5 3.0 3.8 3.5 116 chr2L 14840957 3` UTR CR43805 - chr2L 14841015 3` UTR CR43805 - chr2L 14841073 3` UTR CR43805 - chr2L_17_14840001 chr2L_14840001 RAL-406 513 chr2L 14876859 14876899 chr2L 14877000 14877040 17 136 6.5 3.0 4.8 2.9 181 chr2L 14876859 5` UTR CR45727 + chr2L 14876950 5` UTR CR45727 + chr2L 14877040 5` UTR CR45727 + chr2L_17_14875001 chr2L_14875001 RAL-406 514 chr2L 14889934 14889939 chr2L 14890379 14890384 jockey 5 445 8.5 3.5 6.0 0.7 450 chr2L 14889934 intergenic not near genes chr2L 14890159 intergenic not near genes chr2L 14890384 intergenic not near genes chr2L_5_14890001 chr2L_14890001 RAL-406 515 chr2L 14889949 14889980 chr2L 14890376 14890425 jockey 12 443 3.5 3.5 3.5 2.7 476 chr2L 14889949 intergenic not near genes chr2L 14890187 intergenic not near genes chr2L 14890425 intergenic not near genes chr2L_12_14890001 chr2L_14890001 RAL-406 516 chr2L 14933359 14933380 chr2L 14933457 14933478 10 97 12.0 4.0 8.0 1.1 119 chr2L 14933359 intron CG42313 - chr2L 14933418 intron CG42313 - chr2L 14933478 intron CG42313 - chr2L_10_14930001 chr2L_14930001 RAL-406 517 chr2L 14984381 14984386 chr2L 14991980 14992008 opus 5 7612 8.5 5.0 6.8 0.6 7627 chr2L 14984381 intron mol - chr2L 14988194 intron mol - chr2L 14992008 intron mol - chr2L_5_14985001 chr2L_14985001 RAL-406 518 chr2L 14984387 14984402 chr2L 14991979 14992018 opus 9 7613 7.0 5.0 6.0 1.3 7631 chr2L 14984387 intron mol - chr2L 14988202 intron mol - chr2L 14992018 intron mol - chr2L_9_14985001 chr2L_14985001 RAL-406 519 chr2L 15000870 15000873 chr2L 15000994 15001004 4 124 17.5 22.0 19.8 0.2 134 chr2L 15000870 intergenic not near genes chr2L 15000937 intergenic not near genes chr2L 15001004 intergenic not near genes chr2L_4_15000001 chr2L_15000001 RAL-406 520 chr2L 15003524 15003570 chr2L 15003628 15003657 11 99 9.0 5.0 7.0 1.4 133 chr2L 15003524 intergenic not near genes chr2L 15003590 intergenic not near genes chr2L 15003657 intergenic not near genes chr2L_11_15000001 chr2L_15000001 RAL-406 521 chr2L 15013137 15013180 chr2L 15013261 15013309 11 121 4.5 9.0 6.8 1.4 172 chr2L 15013137 intergenic CR43856 - chr2L 15013223 intergenic not near genes chr2L 15013309 intergenic not near genes chr2L_11_15010001 chr2L_15010001 RAL-406 522 chr2L 15014612 15014623 chr2L 15014701 15014722 10 93 2.5 5.0 3.8 2.1 110 chr2L 15014612 intergenic not near genes chr2L 15014667 intergenic not near genes chr2L 15014722 intergenic not near genes chr2L_10_15010001 chr2L_15010001 RAL-406 523 chr2L 15021420 15021472 chr2L 15021516 15021568 27 94 6.0 6.0 6.0 3.9 148 chr2L 15021420 intron GABA-B-R1 + chr2L 15021494 intron GABA-B-R1 + chr2L 15021568 intron GABA-B-R1 + chr2L_27_15020001 chr2L_15020001 RAL-406 524 chr2L 15078053 15078098 chr2L 15078161 15078186 11 102 4.0 7.0 5.5 1.7 133 chr2L 15078053 intron CG15270 + chr2L 15078120 intron CG15270 + chr2L 15078186 intron CG15270 + chr2L_11_15075001 chr2L_15075001 RAL-406 525 chr2L 15122792 15122800 chr2L 15122892 15122900 5 100 0.0 16.5 8.2 0.5 108 chr2L 15122792 intergenic not near genes chr2L 15122846 intergenic not near genes chr2L 15122900 intergenic not near genes chr2L_5_15120001 chr2L_15120001 RAL-406 526 chr2L 15127747 15127792 chr2L 15127853 15127898 5 101 5.5 3.5 4.5 0.9 151 chr2L 15127747 intergenic not near genes chr2L 15127822 intergenic not near genes chr2L 15127898 intergenic not near genes chr2L_5_15125001 chr2L_15125001 RAL-406 527 chr2L 15138754 15138803 chr2L 15138857 15138905 7 103 0.0 5.5 2.8 1.8 151 chr2L 15138754 intergenic not near genes chr2L 15138830 intergenic not near genes chr2L 15138905 intergenic not near genes chr2L_7_15135001 chr2L_15135001 RAL-406 528 chr2L 15193809 15193820 chr2L 15193916 15193927 6 106 2.0 12.5 7.2 0.7 118 chr2L 15193809 intron CG4168 - chr2L 15193868 intron CG4168 - chr2L 15193927 intron CG4168 - chr2L_6_15190001 chr2L_15190001 RAL-406 529 chr2L 15216102 15216106 chr2L 15216236 15216240 4 134 2.5 0.0 1.2 1.8 138 chr2L 15216102 3` UTR CG43230 + chr2L 15216171 intergenic CG43230 + chr2L 15216240 intergenic CG43230 + chr2L_4_15215001 chr2L_15215001 RAL-406 530 chr2L 15242621 15242658 chr2L 15242729 15242760 11 107 0.0 3.5 1.8 3.9 139 chr2L 15242621 intron ZnT35C - chr2L 15242690 intron ZnT35C - chr2L 15242760 intron ZnT35C - chr2L_11_15240001 chr2L_15240001 RAL-406 531 chr2L 15252961 15253006 chr2L 15253060 15253105 21 99 4.0 3.5 3.8 4.4 144 chr2L 15252961 intron dao + chr2L 15253033 intron dao + chr2L 15253105 intron dao + chr2L_21_15250001 chr2L_15250001 RAL-406 532 chr2L 15291155 15291163 chr2L 15291271 15291272 4 113 0.0 0.0 0.0 4.0 117 chr2L 15291155 intergenic CG15260 - chr2L 15291214 intergenic CG15260 - chr2L 15291272 intergenic CG15260 - chr2L_4_15290001 chr2L_15290001 RAL-406 533 chr2L 15313022 15313039 chr2L 15313126 15313143 6 104 3.5 3.5 3.5 1.3 121 chr2L 15313022 intergenic not near genes chr2L 15313082 intergenic not near genes chr2L 15313143 intergenic not near genes chr2L_6_15310001 chr2L_15310001 RAL-406 534 chr2L 15350878 15350933 chr2L 15350981 15351037 25 103 1.0 4.0 2.5 7.1 159 chr2L 15350878 intergenic not near genes chr2L 15350958 intergenic not near genes chr2L 15351037 intergenic not near genes chr2L_25_15350001 chr2L_15350001 RAL-406 535 chr2L 15375801 15375846 chr2L 15375933 15375977 16 129 2.5 4.5 3.5 3.6 176 chr2L 15375801 intergenic not near genes chr2L 15375889 intergenic not near genes chr2L 15375977 intergenic not near genes chr2L_16_15375001 chr2L_15375001 RAL-406 536 chr2L 15387354 15387407 chr2L 15387454 15387497 6 98 4.5 0.5 2.5 1.7 143 chr2L 15387354 intergenic not near genes chr2L 15387426 intergenic not near genes chr2L 15387497 intergenic not near genes chr2L_6_15385001 chr2L_15385001 RAL-406 537 chr2L 15394161 15394187 chr2L 15394267 15394293 9 104 1.5 0.0 0.8 5.0 132 chr2L 15394161 intergenic not near genes chr2L 15394227 intergenic not near genes chr2L 15394293 intergenic not near genes chr2L_9_15390001 chr2L_15390001 RAL-406 538 chr2L 15396240 15396260 chr2L 15396337 15396357 6 97 7.5 0.5 4.0 1.2 117 chr2L 15396240 intergenic CR44859 + chr2L 15396298 intergenic CR44859 + chr2L 15396357 5` UTR CR44859 + chr2L_6_15395001 chr2L_15395001 RAL-406 539 chr2L 15427373 15427388 chr2L 15427472 15427486 8 98 8.5 0.0 4.2 1.5 113 chr2L 15427373 intergenic not near genes chr2L 15427430 intergenic not near genes chr2L 15427486 intergenic not near genes chr2L_8_15425001 chr2L_15425001 RAL-406 540 chr2L 15446029 15446080 chr2L 15453518 15453569 blood 21 7485 5.0 4.5 4.8 3.6 7540 chr2L 15446029 intergenic not near genes chr2L 15449799 intergenic not near genes chr2L 15453569 intergenic not near genes chr2L_21_15445001 chr2L_15445001 RAL-406 541 chr2L 15458267 15458278 chr2L 15458367 15458386 6 107 5.5 9.0 7.2 0.7 119 chr2L 15458267 intergenic not near genes chr2L 15458326 intergenic not near genes chr2L 15458386 intergenic not near genes chr2L_6_15455001 chr2L_15455001 RAL-406 542 chr2L 15476390 15476419 chr2L 15476559 15476598 19 178 0.0 6.0 3.0 4.8 208 chr2L 15476390 intergenic sna - chr2L 15476494 intergenic sna - chr2L 15476598 3` UTR sna - chr2L_19_15475001 chr2L_15475001 RAL-406 543 chr2L 15482563 15482597 chr2L 15482714 15482753 9 154 6.5 6.0 6.2 1.2 190 chr2L 15482563 intergenic not near genes chr2L 15482658 intergenic not near genes chr2L 15482753 intergenic not near genes chr2L_9_15480001 chr2L_15480001 RAL-406 544 chr2L 15500047 15500063 chr2L 15500146 15500159 7 97 5.0 7.5 6.2 1.0 112 chr2L 15500047 intron lace + chr2L 15500103 intron lace + chr2L 15500159 intron lace + chr2L_7_15500001 chr2L_15500001 RAL-406 545 chr2L 15500824 15500857 chr2L 15500901 15500954 13 94 7.5 6.5 7.0 1.6 130 chr2L 15500824 intron lace + chr2L 15500889 intron lace + chr2L 15500954 intron lace + chr2L_13_15500001 chr2L_15500001 RAL-406 546 chr2L 15510932 15510947 chr2L 15511041 15511046 7 108 8.5 6.0 7.2 0.9 114 chr2L 15510932 intergenic not near genes chr2L 15510989 intergenic not near genes chr2L 15511046 intergenic not near genes chr2L_7_15510001 chr2L_15510001 RAL-406 547 chr2L 15510950 15510962 chr2L 15511033 15511076 10 105 5.5 5.0 5.2 1.6 126 chr2L 15510950 intergenic not near genes chr2L 15511013 intergenic not near genes chr2L 15511076 intergenic not near genes chr2L_10_15510001 chr2L_15510001 RAL-406 548 chr2L 15514325 15514330 chr2L 15514402 15514414 5 94 11.0 7.0 9.0 0.5 89 chr2L 15514325 intergenic not near genes chr2L 15514370 intergenic not near genes chr2L 15514414 intergenic not near genes chr2L_5_15510001 chr2L_15510001 RAL-406 549 chr2L 15535865 15535917 chr2L 15535975 15536027 16 105 4.5 8.5 6.5 2.1 162 chr2L 15535865 intergenic not near genes chr2L 15535946 intergenic not near genes chr2L 15536027 intergenic not near genes chr2L_16_15535001 chr2L_15535001 RAL-406 550 chr2L 15586398 15586443 chr2L 15593463 15593513 297 13 7069 7.5 0.5 4.0 2.6 7115 chr2L 15586398 intergenic not near genes chr2L 15589956 intergenic not near genes chr2L 15593513 intergenic not near genes chr2L_13_15585001 chr2L_15585001 RAL-406 551 chr2L 15636662 15636680 chr2L 15636751 15636776 9 91 3.5 3.0 3.2 2.1 114 chr2L 15636662 intergenic not near genes chr2L 15636719 intergenic not near genes chr2L 15636776 intergenic not near genes chr2L_9_15635001 chr2L_15635001 RAL-406 552 chr2L 15751424 15751454 chr2L 15751521 15751551 6 97 5.5 2.0 3.8 1.2 127 chr2L 15751424 intergenic snRNA:U5:35D -,l(2)35Di - chr2L 15751488 intergenic snRNA:U5:35D -,l(2)35Di - chr2L 15751551 intergenic snRNA:U5:35D -,l(2)35Di - chr2L_6_15750001 chr2L_15750001 RAL-406 553 chr2L 15790175 15790261 chr2L 15790261 15790357 13 123 0.0 0.5 0.2 10.8 182 chr2L 15790175 intergenic CG18109 + chr2L 15790266 intergenic CG18109 + chr2L 15790357 intergenic CG18109 + chr2L_13_15790001 chr2L_15790001 RAL-406 554 chr2L 15819322 15819336 chr2L 15819393 15819402 6 80 7.0 3.0 5.0 1.0 80 chr2L 15819322 intergenic not near genes chr2L 15819362 intergenic not near genes chr2L 15819402 intergenic not near genes chr2L_6_15815001 chr2L_15815001 RAL-406 555 chr2L 15821068 15821080 chr2L 15821162 15821200 5 114 0.0 1.0 0.5 3.3 132 chr2L 15821068 intergenic not near genes chr2L 15821134 intergenic not near genes chr2L 15821200 intergenic not near genes chr2L_5_15820001 chr2L_15820001 RAL-406 556 chr2L 15826874 15826892 chr2L 15829288 15829306 Tabor 6 2413 7.0 9.0 8.0 0.7 2432 chr2L 15826874 intergenic not near genes chr2L 15828090 intergenic not near genes chr2L 15829306 intergenic not near genes chr2L_6_15825001 chr2L_15825001 RAL-406 557 chr2L 15887697 15887735 chr2L 15887850 15887888 13 148 8.5 4.5 6.5 1.7 191 chr2L 15887697 intergenic not near genes chr2L 15887792 intergenic not near genes chr2L 15887888 intergenic not near genes chr2L_13_15885001 chr2L_15885001 RAL-406 558 chr2L 15906185 15906214 chr2L 15906269 15906323 17 94 4.0 4.0 4.0 3.4 138 chr2L 15906185 intron beat-Ib - chr2L 15906254 intron beat-Ib - chr2L 15906323 exon beat-Ib - chr2L_17_15905001 chr2L_15905001 RAL-406 559 chr2L 15912108 15912113 chr2L 15912221 15912226 6 113 5.0 12.0 8.5 0.6 118 chr2L 15912108 intron beat-Ib - chr2L 15912167 intron beat-Ib - chr2L 15912226 intron beat-Ib - chr2L_6_15910001 chr2L_15910001 RAL-406 560 chr2L 15935178 15935217 chr2L 15935287 15935327 11 105 6.0 3.0 4.5 2.0 149 chr2L 15935178 intron beat-Ib - chr2L 15935252 intron beat-Ib - chr2L 15935327 intron beat-Ib - chr2L_11_15935001 chr2L_15935001 RAL-406 561 chr2L 15947142 15947183 chr2L 15947238 15947252 5 89 4.5 3.5 4.0 1.0 110 chr2L 15947142 intron beat-Ib - chr2L 15947197 intron beat-Ib - chr2L 15947252 intron beat-Ib - chr2L_5_15945001 chr2L_15945001 RAL-406 562 chr2L 15950371 15950381 chr2L 15950469 15950477 4 98 1.5 0.5 1.0 2.0 106 chr2L 15950371 intron beat-Ib - chr2L 15950424 intron beat-Ib - chr2L 15950477 intron beat-Ib - chr2L_4_15950001 chr2L_15950001 RAL-406 563 chr2L 15950383 15950409 chr2L 15950466 15950507 6 87 1.0 0.5 0.8 3.3 124 chr2L 15950383 intron beat-Ib - chr2L 15950445 intron beat-Ib - chr2L 15950507 intron beat-Ib - chr2L_6_15950001 chr2L_15950001 RAL-406 564 chr2L 15956005 15956060 chr2L 15957492 15957496 hobo 20 1483 4.0 9.5 6.8 2.6 1491 chr2L 15956005 intron beat-Ib - chr2L 15956750 intron beat-Ib - chr2L 15957496 intron beat-Ib - chr2L_20_15955001 chr2L_15955001 RAL-406 565 chr2L 15971983 15972002 chr2L 15972101 15972120 6 118 0.0 10.0 5.0 1.0 137 chr2L 15971983 intergenic not near genes chr2L 15972052 intergenic not near genes chr2L 15972120 intergenic not near genes chr2L_6_15970001 chr2L_15970001 RAL-406 566 chr2L 16001452 16001481 chr2L 16001560 16001584 10 108 0.5 5.0 2.8 2.6 132 chr2L 16001452 intron beat-Ic + chr2L 16001518 intron beat-Ic + chr2L 16001584 intron beat-Ic + chr2L_10_16000001 chr2L_16000001 RAL-406 567 chr2L 16001483 16001493 chr2L 16001558 16001601 5 100 0.5 5.0 2.8 1.3 118 chr2L 16001483 intron beat-Ic + chr2L 16001542 intron beat-Ic + chr2L 16001601 intron beat-Ic + chr2L_5_16000001 chr2L_16000001 RAL-406 568 chr2L 16043570 16043595 chr2L 16043648 16043693 14 101 2.0 5.5 3.8 2.9 123 chr2L 16043570 intron,intron BicC +,CG45084 + chr2L 16043632 intron,intron BicC +,CG45084 + chr2L 16043693 intron,intron BicC +,CG45084 + chr2L_14_16040001 chr2L_16040001 RAL-406 569 chr2L 16049283 16049308 chr2L 16049377 16049388 8 88 1.0 4.5 2.8 2.1 105 chr2L 16049283 intergenic not near genes chr2L 16049336 intergenic not near genes chr2L 16049388 intergenic not near genes chr2L_8_16045001 chr2L_16045001 RAL-406 570 chr2L 16058104 16058151 chr2L 16058265 16058303 17 159 7.5 2.0 4.8 2.9 199 chr2L 16058104 intron beat-Ia + chr2L 16058204 intron beat-Ia + chr2L 16058303 intron beat-Ia + chr2L_17_16055001 chr2L_16055001 RAL-406 571 chr2L 16090166 16090196 chr2L 16090276 16090304 7 107 1.0 0.5 0.8 3.9 138 chr2L 16090166 intergenic not near genes chr2L 16090235 intergenic not near genes chr2L 16090304 intergenic not near genes chr2L_7_16090001 chr2L_16090001 RAL-406 572 chr2L 16098907 16098950 chr2L 16099012 16099058 21 106 4.0 10.0 7.0 2.6 151 chr2L 16098907 intergenic not near genes chr2L 16098982 intergenic not near genes chr2L 16099058 intergenic not near genes chr2L_21_16095001 chr2L_16095001 RAL-406 573 chr2L 16141149 16141158 chr2L 16146376 16146385 copia 5 5227 9.5 5.0 7.2 0.6 5236 chr2L 16141149 intergenic not near genes chr2L 16143767 intergenic not near genes chr2L 16146385 intergenic not near genes chr2L_5_16140001 chr2L_16140001 RAL-406 574 chr2L 16141161 16141184 chr2L 16146372 16146411 copia 12 5225 7.0 5.0 6.0 1.7 5250 chr2L 16141161 intergenic not near genes chr2L 16143786 intergenic not near genes chr2L 16146411 intergenic not near genes chr2L_12_16140001 chr2L_16140001 RAL-406 575 chr2L 16153721 16153736 chr2L 16160795 16160810 297 7 7073 10.0 4.5 7.2 0.9 7089 chr2L 16153721 intergenic not near genes chr2L 16157266 intergenic not near genes chr2L 16160810 intergenic not near genes chr2L_7_16155001 chr2L_16155001 RAL-406 576 chr2L 16153737 16153747 chr2L 16160791 16160821 297 5 7067 9.0 4.5 6.8 0.6 7084 chr2L 16153737 intergenic not near genes chr2L 16157279 intergenic not near genes chr2L 16160821 intergenic not near genes chr2L_5_16155001 chr2L_16155001 RAL-406 577 chr2L 16195890 16195941 chr2L 16195987 16196035 14 93 4.0 3.0 3.5 3.1 145 chr2L 16195890 3` UTR CR44735 - chr2L 16195962 3` UTR CR44735 - chr2L 16196035 3` UTR CR44735 - chr2L_14_16195001 chr2L_16195001 RAL-406 578 chr2L 16375371 16375393 chr2L 16375482 16375492 4 108 11.0 0.0 5.5 0.6 121 chr2L 16375371 intergenic not near genes chr2L 16375432 intergenic not near genes chr2L 16375492 intergenic not near genes chr2L_4_16375001 chr2L_16375001 RAL-406 579 chr2L 16432489 16432499 chr2L 16432594 16432597 5 104 5.0 0.0 2.5 1.4 108 chr2L 16432489 intron CG5888 - chr2L 16432543 intron CG5888 - chr2L 16432597 intron CG5888 - chr2L_5_16430001 chr2L_16430001 RAL-406 580 chr2L 16443977 16444005 chr2L 16444069 16444102 15 91 6.5 1.0 3.8 3.1 125 chr2L 16443977 intron CG5888 - chr2L 16444040 intron CG5888 - chr2L 16444102 intron CG5888 - chr2L_15_16440001 chr2L_16440001 RAL-406 581 chr2L 16444007 16444016 chr2L 16444067 16444109 7 83 5.5 1.0 3.2 1.7 102 chr2L 16444007 intron CG5888 - chr2L 16444058 intron CG5888 - chr2L 16444109 intron CG5888 - chr2L_7_16440001 chr2L_16440001 RAL-406 582 chr2L 16458808 16458814 chr2L 16459024 16459030 4 216 4.0 2.0 3.0 1.0 222 chr2L 16458808 intergenic not near genes chr2L 16458919 intergenic not near genes chr2L 16459030 intergenic not near genes chr2L_4_16455001 chr2L_16455001 RAL-406 583 chr2L 16477844 16477870 chr2L 16477943 16477947 5 94 8.0 3.5 5.8 0.7 103 chr2L 16477844 intron dac - chr2L 16477896 intron dac - chr2L 16477947 intron dac - chr2L_5_16475001 chr2L_16475001 RAL-406 584 chr2L 16507952 16507962 chr2L 16508060 16508070 6 108 0.0 11.0 5.5 0.9 118 chr2L 16507952 intergenic CG5953 -,Tpr2 + chr2L 16508011 intergenic CG5953 -,Tpr2 + chr2L 16508070 intergenic CG5953 -,Tpr2 + chr2L_6_16505001 chr2L_16505001 RAL-406 585 chr2L 16511944 16511992 chr2L 16519078 16519126 HMS-Beagle 17 7133 4.5 2.0 3.2 4.0 7182 chr2L 16511944 intron CG5953 - chr2L 16515535 intron CG5953 - chr2L 16519126 intron CG5953 - chr2L_17_16515001 chr2L_16515001 RAL-406 586 chr2L 16547172 16547218 chr2L 16547283 16547329 24 109 4.0 4.0 4.0 4.8 157 chr2L 16547172 intron CG42389 + chr2L 16547250 intron CG42389 + chr2L 16547329 intron CG42389 + chr2L_24_16545001 chr2L_16545001 RAL-406 587 chr2L 16548470 16548487 chr2L 16548611 16548628 4 141 3.0 0.0 1.5 1.6 158 chr2L 16548470 intron CG42389 + chr2L 16548549 intron CG42389 + chr2L 16548628 intron CG42389 + chr2L_4_16545001 chr2L_16545001 RAL-406 588 chr2L 16572199 16572241 chr2L 16572302 16572339 13 109 8.0 1.5 4.8 2.2 140 chr2L 16572199 intron CG42389 + chr2L 16572269 intron CG42389 + chr2L 16572339 intron CG42389 + chr2L_13_16570001 chr2L_16570001 RAL-406 589 chr2L 9669659 9669660 chr2L 16703573 16703574 4 7033914 17.5 9.0 13.2 0.3 7033915 chr2L 9669659 3` UTR CR44150 - chr2L 13186616 exon CG16974 - chr2L 16703574 intergenic not near genes chr2L_4_13185001 chr2L_13185001 RAL-406 590 chr2L 16703649 16703659 chr2L 16703910 16703920 5 261 0.5 5.0 2.8 1.3 271 chr2L 16703649 intergenic not near genes chr2L 16703784 intergenic not near genes chr2L 16703920 intergenic CG31808 - chr2L_5_16700001 chr2L_16700001 RAL-406 591 chr2L 16867006 16867036 chr2L 16867121 16867151 12 114 3.0 6.0 4.5 2.2 145 chr2L 16867006 intergenic not near genes chr2L 16867078 intergenic not near genes chr2L 16867151 intergenic not near genes chr2L_12_16865001 chr2L_16865001 RAL-406 592 chr2L 16958089 16958136 chr2L 16962897 16962922 Doc 18 4806 4.5 5.0 4.8 3.1 4833 chr2L 16958089 intergenic not near genes chr2L 16960506 intergenic not near genes chr2L 16962922 intergenic not near genes chr2L_18_16960001 chr2L_16960001 RAL-406 593 chr2L 16999009 16999035 chr2L 16999108 16999134 12 97 0.0 4.5 2.2 3.8 125 chr2L 16999009 intergenic CR45357 +,CR45356 + chr2L 16999072 intergenic CR45357 + chr2L 16999134 intergenic CR45357 + chr2L_12_16995001 chr2L_16995001 RAL-406 594 chr2L 17005392 17005415 chr2L 17005509 17005526 6 113 3.5 7.0 5.2 1.0 134 chr2L 17005392 intergenic not near genes chr2L 17005459 intergenic not near genes chr2L 17005526 intergenic not near genes chr2L_6_17005001 chr2L_17005001 RAL-406 595 chr2L 17033901 17033930 chr2L 17034006 17034035 19 103 6.5 6.5 6.5 2.5 134 chr2L 17033901 intergenic not near genes chr2L 17033968 intergenic not near genes chr2L 17034035 intergenic not near genes chr2L_19_17030001 chr2L_17030001 RAL-406 596 chr2L 17033932 17033947 chr2L 17034005 17034045 4 91 3.0 6.5 4.8 0.7 113 chr2L 17033932 intergenic not near genes chr2L 17033988 intergenic not near genes chr2L 17034045 intergenic not near genes chr2L_4_17030001 chr2L_17030001 RAL-406 597 chr2L 17070179 17070219 chr2L 17070295 17070308 17 112 6.0 8.5 7.2 2.1 129 chr2L 17070179 intergenic not near genes chr2L 17070244 intergenic not near genes chr2L 17070308 intergenic not near genes chr2L_17_17070001 chr2L_17070001 RAL-406 598 chr2L 17102986 17103035 chr2L 17103094 17103130 19 107 2.5 1.5 2.0 6.3 144 chr2L 17102986 intergenic not near genes chr2L 17103058 intergenic not near genes chr2L 17103130 intergenic not near genes chr2L_19_17100001 chr2L_17100001 RAL-406 599 chr2L 17114791 17114803 chr2L 17114913 17114925 5 122 6.0 10.5 8.2 0.5 134 chr2L 17114791 intergenic not near genes chr2L 17114858 intergenic not near genes chr2L 17114925 intergenic not near genes chr2L_5_17110001 chr2L_17110001 RAL-406 600 chr2L 17167547 17167595 chr2L 17167808 17167856 pogo 22 258 6.0 4.5 5.2 3.5 309 chr2L 17167547 intron,intron CG34106 +,beat-IIIa + chr2L 17167702 intron,intron CG34106 +,beat-IIIa + chr2L 17167856 intron,intron CG34106 +,beat-IIIa + chr2L_22_17165001 chr2L_17165001 RAL-406 601 chr2L 17199141 17199184 chr2L 17200628 17200671 hobo 11 1486 6.0 4.5 5.2 1.8 1530 chr2L 17199141 intron beat-IIIc - chr2L 17199906 intron beat-IIIc - chr2L 17200671 intron beat-IIIc - chr2L_11_17195001 chr2L_17195001 RAL-406 602 chr2L 17213210 17213228 chr2L 17214110 17214149 10 914 4.5 5.0 4.8 1.7 939 chr2L 17213210 intron beat-IIIc - chr2L 17213680 intron beat-IIIc - chr2L 17214149 intron beat-IIIc - chr2L_10_17210001 chr2L_17210001 RAL-406 603 chr2L 17261184 17261246 chr2L 17261295 17261337 5 96 0.0 4.0 2.0 1.7 153 chr2L 17261184 intergenic beat-IIIc - chr2L 17261260 intergenic not near genes chr2L 17261337 intergenic not near genes chr2L_5_17260001 chr2L_17260001 RAL-406 604 chr2L 17264726 17264776 chr2L 17264826 17264876 12 95 1.0 7.0 4.0 2.4 150 chr2L 17264726 intergenic not near genes chr2L 17264801 intergenic not near genes chr2L 17264876 intergenic not near genes chr2L_12_17260001 chr2L_17260001 RAL-406 605 chr2L 17273219 17273223 chr2L 17277976 17278018 F-element 5 4782 2.0 3.5 2.8 1.3 4799 chr2L 17273219 intergenic not near genes chr2L 17275618 intergenic not near genes chr2L 17278018 intergenic not near genes chr2L_5_17275001 chr2L_17275001 RAL-406 606 chr2L 17327908 17327929 chr2L 17327998 17327999 7 89 4.5 5.5 5.0 1.2 91 chr2L 17327908 intergenic not near genes chr2L 17327954 intergenic not near genes chr2L 17327999 intergenic not near genes chr2L_7_17325001 chr2L_17325001 RAL-406 607 chr2L 17351927 17351944 chr2L 17352049 17352066 5 122 5.5 6.5 6.0 0.7 139 chr2L 17351927 intergenic not near genes chr2L 17351996 intergenic not near genes chr2L 17352066 intergenic not near genes chr2L_5_17350001 chr2L_17350001 RAL-406 608 chr2L 17351945 17351955 chr2L 17352048 17352077 6 118 4.5 6.0 5.2 1.0 132 chr2L 17351945 intergenic not near genes chr2L 17352011 intergenic not near genes chr2L 17352077 intergenic not near genes chr2L_6_17350001 chr2L_17350001 RAL-406 609 chr2L 17379652 17379706 chr2L 17379766 17379811 9 106 6.0 0.0 3.0 2.2 159 chr2L 17379652 intron Lrch - chr2L 17379732 intron Lrch - chr2L 17379811 intron Lrch - chr2L_9_17375001 chr2L_17375001 RAL-406 610 chr2L 17425167 17425207 chr2L 17425521 17425573 13 358 2.5 3.0 2.8 3.4 406 chr2L 17425167 intron Dif - chr2L 17425370 intron Dif - chr2L 17425573 intron Dif - chr2L_13_17425001 chr2L_17425001 RAL-406 611 chr2L 17425748 17425795 chr2L 17425895 17425942 21 146 4.5 7.5 6.0 3.0 194 chr2L 17425748 intron Dif - chr2L 17425845 intron Dif - chr2L 17425942 intron Dif - chr2L_21_17425001 chr2L_17425001 RAL-406 612 chr2L 17444185 17444204 chr2L 17444301 17444303 7 115 6.5 1.5 4.0 1.4 118 chr2L 17444185 intron dl - chr2L 17444244 intron dl - chr2L 17444303 intron dl - chr2L_7_17440001 chr2L_17440001 RAL-406 613 chr2L 17517840 17517880 chr2L 17517943 17517983 16 101 4.0 2.0 3.0 4.0 143 chr2L 17517840 intron Dhc36C + chr2L 17517912 intron Dhc36C + chr2L 17517983 intron Dhc36C + chr2L_16_17515001 chr2L_17515001 RAL-406 614 chr2L 17543574 17543620 chr2L 17543687 17543733 11 107 3.0 3.0 3.0 2.8 159 chr2L 17543574 intergenic not near genes chr2L 17543654 intergenic not near genes chr2L 17543733 intergenic not near genes chr2L_11_17540001 chr2L_17540001 RAL-406 615 chr2L 17607463 17607469 chr2L 17607581 17607587 4 118 11.0 2.0 6.5 0.5 124 chr2L 17607463 intergenic CR44412 - chr2L 17607525 intergenic CR44412 - chr2L 17607587 intergenic CR44412 - chr2L_4_17605001 chr2L_17605001 RAL-406 616 chr2L 17675923 17675974 chr2L 17676022 17676073 21 98 3.5 5.0 4.2 4.0 150 chr2L 17675923 intron CadN - chr2L 17675998 intron CadN - chr2L 17676073 intron CadN - chr2L_21_17675001 chr2L_17675001 RAL-406 617 chr2L 17687500 17687522 chr2L 17692265 17692287 F-element 7 4764 5.0 7.0 6.0 1.0 4787 chr2L 17687500 intron CadN - chr2L 17689894 intron CadN - chr2L 17692287 intron CadN - chr2L_7_17685001 chr2L_17685001 RAL-406 618 chr2L 17692926 17692977 chr2L 17693060 17693111 23 131 2.5 2.5 2.5 6.6 185 chr2L 17692926 intron CadN - chr2L 17693018 intron CadN - chr2L 17693111 intron CadN - chr2L_23_17690001 chr2L_17690001 RAL-406 619 chr2L 17703661 17703684 chr2L 17703742 17703794 9 102 1.5 3.5 2.5 2.6 133 chr2L 17703661 intron CadN - chr2L 17703728 intron CadN - chr2L 17703794 intron CadN - chr2L_9_17700001 chr2L_17700001 RAL-406 620 chr2L 17723770 17723802 chr2L 17723883 17723908 8 112 1.5 6.0 3.8 1.7 138 chr2L 17723770 intron CadN - chr2L 17723839 intron CadN - chr2L 17723908 intron CadN - chr2L_8_17720001 chr2L_17720001 RAL-406 621 chr2L 17741946 17741985 chr2L 17742042 17742081 13 96 4.5 4.5 4.5 2.4 135 chr2L 17741946 intron CadN - chr2L 17742014 intron CadN - chr2L 17742081 intron CadN - chr2L_13_17740001 chr2L_17740001 RAL-406 622 chr2L 17819904 17819949 chr2L 17825127 17825172 copia 7 5218 5.5 4.0 4.8 1.2 5268 chr2L 17819904 intron CadN2 - chr2L 17822538 intron CadN2 - chr2L 17825172 intron CadN2 - chr2L_7_17820001 chr2L_17820001 RAL-406 623 chr2L 17879982 17880024 chr2L 17880089 17880105 5 98 2.5 5.0 3.8 1.0 123 chr2L 17879982 intergenic not near genes chr2L 17880044 intergenic not near genes chr2L 17880105 intergenic not near genes chr2L_5_17880001 chr2L_17880001 RAL-406 624 chr2L 17911967 17911982 chr2L 17914136 17914180 pogo 5 2189 2.5 5.0 3.8 1.0 2213 chr2L 17911967 intergenic not near genes chr2L 17913074 intergenic not near genes chr2L 17914180 intergenic CG43271 - chr2L_5_17910001 chr2L_17910001 RAL-406 625 chr2L 17938676 17938719 chr2L 17938782 17938825 9 104 4.0 3.0 3.5 2.0 149 chr2L 17938676 intergenic CR44399 - chr2L 17938750 intergenic CR44399 - chr2L 17938825 intergenic CR44399 - chr2L_9_17935001 chr2L_17935001 RAL-406 626 chr2L 17943885 17943922 chr2L 17943992 17944044 17 117 8.0 2.5 5.2 2.7 159 chr2L 17943885 intergenic not near genes chr2L 17943964 intergenic not near genes chr2L 17944044 intergenic not near genes chr2L_17_17940001 chr2L_17940001 RAL-406 627 chr2L 17951936 17951978 chr2L 17953413 17953443 hobo 17 1480 5.5 5.5 5.5 2.6 1507 chr2L 17951936 intergenic CR44398 -,CR44397 - chr2L 17952690 intergenic not near genes chr2L 17953443 intergenic not near genes chr2L_17_17950001 chr2L_17950001 RAL-406 628 chr2L 17955854 17955902 chr2L 17955966 17956014 25 110 3.5 6.0 4.8 4.3 160 chr2L 17955854 intergenic not near genes chr2L 17955934 intergenic not near genes chr2L 17956014 intergenic not near genes chr2L_25_17955001 chr2L_17955001 RAL-406 629 chr2L 17958311 17958359 chr2L 17958427 17958475 9 108 4.0 4.5 4.2 1.7 164 chr2L 17958311 intergenic not near genes chr2L 17958393 intergenic not near genes chr2L 17958475 intergenic not near genes chr2L_9_17955001 chr2L_17955001 RAL-406 630 chr2L 18051856 18051904 chr2L 18061023 18061064 roo 22 9160 8.0 9.0 8.5 2.3 9208 chr2L 18051856 intron rdo + chr2L 18056460 intron rdo + chr2L 18061064 intron rdo + chr2L_22_18055001 chr2L_18055001 RAL-406 631 chr2L 18078294 18078306 chr2L 18078364 18078412 7 95 5.0 2.0 3.5 1.6 118 chr2L 18078294 5` UTR Arr1 + chr2L 18078353 5` UTR Arr1 + chr2L 18078412 exon Arr1 + chr2L_7_18075001 chr2L_18075001 RAL-406 632 chr2L 18079805 18079836 chr2L 18079911 18079942 9 104 4.5 5.0 4.8 1.6 137 chr2L 18079805 intron Arr1 + chr2L 18079874 intron Arr1 + chr2L 18079942 intron Arr1 + chr2L_9_18075001 chr2L_18075001 RAL-406 633 chr2L 18095570 18095590 chr2L 18095671 18095684 8 100 6.5 5.5 6.0 1.1 114 chr2L 18095570 intergenic not near genes chr2L 18095627 intergenic not near genes chr2L 18095684 intergenic not near genes chr2L_8_18095001 chr2L_18095001 RAL-406 634 chr2L 18111221 18111258 chr2L 18111332 18111341 12 105 8.5 8.0 8.2 1.3 120 chr2L 18111221 intergenic not near genes chr2L 18111281 intergenic not near genes chr2L 18111341 intergenic not near genes chr2L_12_18110001 chr2L_18110001 RAL-406 635 chr2L 18136568 18136609 chr2L 18136669 18136697 6 93 3.5 1.0 2.2 1.9 129 chr2L 18136568 intron kel - chr2L 18136632 intron kel - chr2L 18136697 intron kel - chr2L_6_18135001 chr2L_18135001 RAL-406 636 chr2L 18272177 18272222 chr2L 18272357 18272406 14 178 4.5 4.0 4.2 2.7 229 chr2L 18272177 intron CG42750 - chr2L 18272292 intron CG42750 - chr2L 18272406 intron CG42750 - chr2L_14_18270001 chr2L_18270001 RAL-406 637 chr2L 18279699 18279748 chr2L 18279850 18279899 14 144 6.5 2.5 4.5 2.5 200 chr2L 18279699 intergenic CR44902 - chr2L 18279799 intergenic CR44902 - chr2L 18279899 intergenic CR44902 - chr2L_14_18275001 chr2L_18275001 RAL-406 638 chr2L 18307884 18307917 chr2L 18307981 18308014 10 96 6.0 9.0 7.5 1.2 130 chr2L 18307884 intergenic CR43353 - chr2L 18307949 intergenic CR43353 - chr2L 18308014 intergenic CR43353 - chr2L_10_18305001 chr2L_18305001 RAL-406 639 chr2L 18408012 18408034 chr2L 18412816 18412838 Doc 11 4804 9.5 0.0 4.8 1.9 4826 chr2L 18408012 intergenic not near genes chr2L 18410425 intergenic not near genes chr2L 18412838 intergenic not near genes chr2L_11_18410001 chr2L_18410001 RAL-406 640 chr2L 18419769 18419805 chr2L 18419876 18419912 6 106 4.0 1.0 2.5 1.7 143 chr2L 18419769 intergenic not near genes chr2L 18419840 intergenic not near genes chr2L 18419912 intergenic not near genes chr2L_6_18415001 chr2L_18415001 RAL-406 641 chr2L 18462824 18462854 chr2L 18462920 18462950 6 86 4.5 7.5 6.0 0.9 126 chr2L 18462824 intron let-7-C + chr2L 18462887 intron let-7-C + chr2L 18462950 intron let-7-C + chr2L_6_18460001 chr2L_18460001 RAL-406 642 chr2L 18541713 18541757 chr2L 18541809 18541853 15 94 4.5 2.5 3.5 3.3 140 chr2L 18541713 intron Pde11 - chr2L 18541783 intron Pde11 - chr2L 18541853 intron Pde11 - chr2L_15_18540001 chr2L_18540001 RAL-406 643 chr2L 18561533 18561580 chr2L 18561654 18561701 27 118 2.0 6.0 4.0 5.4 168 chr2L 18561533 intron Pde11 - chr2L 18561617 intron Pde11 - chr2L 18561701 intron Pde11 - chr2L_27_18560001 chr2L_18560001 RAL-406 644 chr2L 18568308 18568331 chr2L 18568402 18568431 16 98 6.0 7.0 6.5 2.1 123 chr2L 18568308 intron Pde11 - chr2L 18568370 intron Pde11 - chr2L 18568431 intron Pde11 - chr2L_16_18565001 chr2L_18565001 RAL-406 645 chr2L 18570698 18570713 chr2L 18570786 18570792 4 83 7.5 7.5 7.5 0.5 94 chr2L 18570698 intron Pde11 - chr2L 18570745 intron Pde11 - chr2L 18570792 intron Pde11 - chr2L_4_18570001 chr2L_18570001 RAL-406 646 chr2L 18811400 18811437 chr2L 18811502 18811539 15 101 8.0 0.0 4.0 3.0 139 chr2L 18811400 intergenic CG10570 -,CG42502 - chr2L 18811470 intergenic CG10570 -,CG42502 - chr2L 18811539 intergenic not near genes chr2L_15_18810001 chr2L_18810001 RAL-406 647 chr2L 18812536 18812588 chr2L 18812819 18812867 18 280 2.5 2.5 2.5 5.1 331 chr2L 18812536 intergenic CG17325 +,CG42305 + chr2L 18812702 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812867 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_18_18810001 chr2L_18810001 RAL-406 648 chr2L 18883853 18883885 chr2L 18883945 18883987 9 96 6.0 9.5 7.8 1.0 134 chr2L 18883853 intergenic not near genes chr2L 18883920 intergenic not near genes chr2L 18883987 intergenic not near genes chr2L_9_18880001 chr2L_18880001 RAL-406 649 chr2L 18898382 18898418 chr2L 18898479 18898520 15 97 4.5 0.5 2.5 4.3 138 chr2L 18898382 intergenic not near genes chr2L 18898451 intergenic not near genes chr2L 18898520 intergenic not near genes chr2L_15_18895001 chr2L_18895001 RAL-406 650 chr2L 18902621 18902657 chr2L 18902904 18902958 17 294 3.0 4.0 3.5 3.8 337 chr2L 18902621 intergenic not near genes chr2L 18902790 intergenic not near genes chr2L 18902958 intergenic not near genes chr2L_17_18900001 chr2L_18900001 RAL-406 651 chr2L 18926567 18926580 chr2L 18926694 18926701 5 126 1.5 4.5 3.0 1.2 134 chr2L 18926567 intron ssp3 - chr2L 18926634 intron ssp3 - chr2L 18926701 intron ssp3 - chr2L_5_18925001 chr2L_18925001 RAL-406 652 chr2L 18926583 18926592 chr2L 18926690 18926714 5 117 1.0 3.5 2.2 1.6 131 chr2L 18926583 intron ssp3 - chr2L 18926648 intron ssp3 - chr2L 18926714 intron ssp3 - chr2L_5_18925001 chr2L_18925001 RAL-406 653 chr2L 19144739 19144764 chr2L 19144849 19144874 5 109 15.0 3.5 9.2 0.5 135 chr2L 19144739 intron brat + chr2L 19144806 intron brat + chr2L 19144874 intron brat + chr2L_5_19140001 chr2L_19140001 RAL-406 654 chr2L 19147352 19147384 chr2L 19154407 19154414 297 6 7049 4.0 5.0 4.5 1.1 7062 chr2L 19147352 intron brat + chr2L 19150883 intron brat + chr2L 19154414 intron brat + chr2L_6_19150001 chr2L_19150001 RAL-406 655 chr2L 19155288 19155328 chr2L 19155745 19155785 9 454 1.5 7.0 4.2 1.7 497 chr2L 19155288 intron brat + chr2L 19155536 intron brat + chr2L 19155785 intron brat + chr2L_9_19155001 chr2L_19155001 RAL-406 656 chr2L 19156648 19156653 chr2L 19156761 19156766 4 113 15.0 2.0 8.5 0.4 118 chr2L 19156648 intron brat + chr2L 19156707 intron brat + chr2L 19156766 intron brat + chr2L_4_19155001 chr2L_19155001 RAL-406 657 chr2L 19220106 19220130 chr2L 19220225 19220270 10 137 9.5 3.5 6.5 1.3 164 chr2L 19220106 intergenic not near genes chr2L 19220188 intergenic not near genes chr2L 19220270 intergenic not near genes chr2L_10_19220001 chr2L_19220001 RAL-406 658 chr2L 19246811 19246852 chr2L 19246911 19246942 18 97 3.5 5.0 4.2 3.5 131 chr2L 19246811 intergenic not near genes chr2L 19246876 intergenic not near genes chr2L 19246942 intergenic not near genes chr2L_18_19245001 chr2L_19245001 RAL-406 659 chr2L 19331112 19331136 chr2L 19331228 19331248 9 117 9.5 6.5 8.0 1.0 136 chr2L 19331112 intergenic not near genes chr2L 19331180 intergenic not near genes chr2L 19331248 intergenic not near genes chr2L_9_19330001 chr2L_19330001 RAL-406 660 chr2L 19345008 19345039 chr2L 19357222 19357268 blood 6 12222 5.0 3.5 4.2 1.2 12260 chr2L 19345008 intron dnt - chr2L 19351138 intron dnt - chr2L 19357268 intron dnt - chr2L_6_19350001 chr2L_19350001 RAL-406 661 chr2L 19357528 19357555 chr2L 19357638 19357665 13 109 13.0 9.5 11.2 1.1 137 chr2L 19357528 intron dnt - chr2L 19357596 intron dnt - chr2L 19357665 intron dnt - chr2L_13_19355001 chr2L_19355001 RAL-406 662 chr2L 19357556 19357569 chr2L 19357636 19357679 9 99 9.0 9.0 9.0 0.9 123 chr2L 19357556 intron dnt - chr2L 19357618 intron dnt - chr2L 19357679 intron dnt - chr2L_9_19355001 chr2L_19355001 RAL-406 663 chr2L 19372695 19372742 chr2L 19372797 19372844 16 99 5.0 7.0 6.0 2.3 149 chr2L 19372695 3` UTR CG17349 + chr2L 19372770 intergenic CG17349 + chr2L 19372844 intergenic CG17349 + chr2L_16_19370001 chr2L_19370001 RAL-406 664 chr2L 19380489 19380527 chr2L 19380589 19380627 12 99 1.0 6.5 3.8 2.5 138 chr2L 19380489 intergenic CG17350 + chr2L 19380558 intergenic CG17350 + chr2L 19380627 intergenic CG17350 + chr2L_12_19380001 chr2L_19380001 RAL-406 665 chr2L 19405597 19405631 chr2L 19405707 19405741 19 109 6.5 4.0 5.2 3.1 144 chr2L 19405597 intron Pax - chr2L 19405669 intron Pax - chr2L 19405741 intron Pax - chr2L_19_19405001 chr2L_19405001 RAL-406 666 chr2L 19437501 19437531 chr2L 19437613 19437643 11 112 6.0 1.0 3.5 2.4 142 chr2L 19437501 intron CG10237 - chr2L 19437572 intron CG10237 - chr2L 19437643 intron CG10237 - chr2L_11_19435001 chr2L_19435001 RAL-406 667 chr2L 19548274 19548310 chr2L 19548375 19548412 17 101 3.5 4.5 4.0 3.4 138 chr2L 19548274 intergenic Tep4 + chr2L 19548343 intergenic Tep4 + chr2L 19548412 intergenic Tep4 + chr2L_17_19545001 chr2L_19545001 RAL-406 668 chr2L 19558505 19558549 chr2L 19558629 19558673 22 119 4.0 8.0 6.0 3.1 168 chr2L 19558505 intron Tep5 + chr2L 19558589 intron Tep5 + chr2L 19558673 intron Tep5 + chr2L_22_19555001 chr2L_19555001 RAL-406 669 chr2L 19559984 19560032 chr2L 19560257 19560283 11 266 3.0 2.0 2.5 3.1 299 chr2L 19559984 exon Tep5 + chr2L 19560134 exon Tep5 + chr2L 19560283 intron Tep5 + chr2L_11_19560001 chr2L_19560001 RAL-406 670 chr2L 19560822 19560853 chr2L 19560922 19560953 15 98 10.0 1.5 5.8 2.2 131 chr2L 19560822 exon Tep5 + chr2L 19560888 exon Tep5 + chr2L 19560953 exon Tep5 + chr2L_15_19560001 chr2L_19560001 RAL-406 671 chr2L 19561339 19561347 chr2L 19561494 19561508 4 160 3.0 5.0 4.0 0.8 169 chr2L 19561339 exon Tep5 + chr2L 19561424 exon Tep5 + chr2L 19561508 exon Tep5 + chr2L_4_19560001 chr2L_19560001 RAL-406 672 chr2L 19601553 19601598 chr2L 19601646 19601695 27 95 3.5 5.5 4.5 4.9 142 chr2L 19601553 intron,intron Lar +,CR44978 - chr2L 19601624 intron,intron Lar +,CR44978 - chr2L 19601695 intron,intron Lar +,CR44978 - chr2L_27_19600001 chr2L_19600001 RAL-406 673 chr2L 19608587 19608609 chr2L 19608698 19608715 5 110 7.0 8.0 7.5 0.6 128 chr2L 19608587 intron Lar + chr2L 19608651 intron Lar + chr2L 19608715 intron Lar + chr2L_5_19605001 chr2L_19605001 RAL-406 674 chr2L 19620107 19620125 chr2L 19621079 19621083 jockey 7 983 8.5 2.0 5.2 1.1 976 chr2L 19620107 intron Lar + chr2L 19620595 intron Lar + chr2L 19621083 intron Lar + chr2L_7_19620001 chr2L_19620001 RAL-406 675 chr2L 19630959 19631009 chr2L 19631550 19631598 5 583 1.0 2.0 1.5 2.0 639 chr2L 19630959 intron Lar + chr2L 19631278 intron Lar + chr2L 19631598 intron Lar + chr2L_5_19630001 chr2L_19630001 RAL-406 676 chr2L 19638528 19638573 chr2L 19638636 19638643 15 105 5.0 9.0 7.0 1.9 115 chr2L 19638528 intron Lar + chr2L 19638586 intron Lar + chr2L 19638643 intron Lar + chr2L_15_19635001 chr2L_19635001 RAL-406 677 chr2L 19652554 19652601 chr2L 19674005 19674057 opus 27 21452 14.5 10.5 12.5 2.0 21503 chr2L 19652554 intron Lar + chr2L 19663306 intron Lar + chr2L 19674057 intron Lar + chr2L_27_19660001 chr2L_19660001 RAL-406 678 chr2L 19703527 19703541 chr2L 19712683 19712691 roo 9 9155 17.5 10.0 13.8 0.6 9164 chr2L 19703527 intron Lar + chr2L 19708109 intron Lar + chr2L 19712691 intron Lar + chr2L_9_19705001 chr2L_19705001 RAL-406 679 chr2L 19703548 19703569 chr2L 19712679 19712718 roo 7 9151 7.0 9.5 8.2 0.8 9170 chr2L 19703548 intron Lar + chr2L 19708133 intron Lar + chr2L 19712718 intron Lar + chr2L_7_19705001 chr2L_19705001 RAL-406 680 chr2L 19737357 19737389 chr2L 19740824 19740848 1360 6 3467 2.5 5.5 4.0 1.2 3491 chr2L 19737357 intergenic Nf-YB + chr2L 19739102 intergenic not near genes chr2L 19740848 intergenic not near genes chr2L_6_19735001 chr2L_19735001 RAL-406 681 chr2L 19754893 19754905 chr2L 19754959 19754974 5 72 2.0 3.5 2.8 1.3 81 chr2L 19754893 intron CG10631 - chr2L 19754934 intron CG10631 - chr2L 19754974 intron CG10631 - chr2L_5_19750001 chr2L_19750001 RAL-406 682 chr2L 19762787 19762836 chr2L 19763049 19763098 pogo 7 262 2.0 2.5 2.2 2.2 311 chr2L 19762787 exon fbp - chr2L 19762942 intron fbp - chr2L 19763098 intron fbp - chr2L_7_19760001 chr2L_19760001 RAL-406 683 chr2L 19821774 19821821 chr2L 19821871 19821872 20 91 3.5 5.0 4.2 3.8 98 chr2L 19821774 intron sick + chr2L 19821823 intron sick + chr2L 19821872 intron sick + chr2L_20_19820001 chr2L_19820001 RAL-406 684 chr2L 19823249 19823295 chr2L 19823350 19823382 10 106 4.0 0.0 2.0 3.3 133 chr2L 19823249 intron sick + chr2L 19823316 intron sick + chr2L 19823382 intron sick + chr2L_10_19820001 chr2L_19820001 RAL-406 685 chr2L 19824409 19824432 chr2L 19824497 19824535 11 101 1.5 5.0 3.2 2.6 126 chr2L 19824409 intron sick + chr2L 19824472 intron sick + chr2L 19824535 intron sick + chr2L_11_19820001 chr2L_19820001 RAL-406 686 chr2L 19833137 19833142 chr2L 19833234 19833239 9 97 4.0 0.0 2.0 3.0 102 chr2L 19833137 intron sick + chr2L 19833188 intron sick + chr2L 19833239 intron sick + chr2L_9_19830001 chr2L_19830001 RAL-406 687 chr2L 19878968 19879019 chr2L 19879197 19879244 17 228 7.0 2.0 4.5 3.1 276 chr2L 19878968 intron sick + chr2L 19879106 intron sick + chr2L 19879244 intron sick + chr2L_17_19875001 chr2L_19875001 RAL-406 688 chr2L 20005854 20005905 chr2L 20010950 20011001 flea 13 5095 6.5 5.0 5.8 1.9 5147 chr2L 20005854 intron CG43861 - chr2L 20008428 intron CG43861 - chr2L 20011001 intron CG43861 - chr2L_13_20005001 chr2L_20005001 RAL-406 689 chr2L 20079495 20079546 chr2L 20079636 20079687 19 137 5.0 0.5 2.8 5.0 192 chr2L 20079495 intron,intron neb +,fok - chr2L 20079591 intron,intron neb +,fok - chr2L 20079687 intron,intron neb +,fok - chr2L_19_20075001 chr2L_20075001 RAL-406 690 chr2L 20272095 20272141 chr2L 20282826 20282837 copia 19 10726 8.5 10.5 9.5 1.8 10742 chr2L 20272095 intergenic not near genes chr2L 20277466 intergenic not near genes chr2L 20282837 intergenic not near genes chr2L_19_20275001 chr2L_20275001 RAL-406 691 chr2L 20296507 20296541 chr2L 20296597 20296642 11 96 0.5 5.0 2.8 2.9 135 chr2L 20296507 intergenic CR43414 - chr2L 20296574 intergenic CR43414 - chr2L 20296642 3` UTR CR43414 - chr2L_11_20295001 chr2L_20295001 RAL-406 692 chr2L 20303156 20303167 chr2L 20310642 20310655 blood 7 7488 7.0 10.0 8.5 0.7 7499 chr2L 20303156 intergenic not near genes chr2L 20306906 intergenic not near genes chr2L 20310655 intergenic not near genes chr2L_7_20305001 chr2L_20305001 RAL-406 693 chr2L 20303171 20303187 chr2L 20310638 20310675 blood 7 7481 6.0 8.5 7.2 0.9 7504 chr2L 20303171 intergenic not near genes chr2L 20306923 intergenic not near genes chr2L 20310675 intergenic not near genes chr2L_7_20305001 chr2L_20305001 RAL-406 694 chr2L 20310873 20310895 chr2L 20310972 20310989 6 98 0.0 8.5 4.2 1.2 116 chr2L 20310873 intergenic spir + chr2L 20310931 intergenic spir + chr2L 20310989 intergenic spir + chr2L_6_20310001 chr2L_20310001 RAL-406 695 chr2L 20372199 20372220 chr2L 20372469 20372490 pogo 16 269 4.5 9.0 6.8 2.1 291 chr2L 20372199 intergenic Ugt37a1 - chr2L 20372344 intergenic Ugt37a1 - chr2L 20372490 exon Ugt37a1 - chr2L_16_20370001 chr2L_20370001 RAL-406 696 chr2L 20498674 20498704 chr2L 20498788 20498823 14 117 0.0 5.0 2.5 4.0 149 chr2L 20498674 intergenic not near genes chr2L 20498748 intergenic not near genes chr2L 20498823 intergenic not near genes chr2L_14_20495001 chr2L_20495001 RAL-406 697 chr2L 20568647 20568669 chr2L 20569057 20569079 X-element 10 408 7.0 3.5 5.2 1.6 432 chr2L 20568647 intron CR45347 + chr2L 20568863 intron CR45347 + chr2L 20569079 intron CR45347 + chr2L_10_20565001 chr2L_20565001 RAL-406 698 chr2L 20568670 20568685 chr2L 20569056 20569095 X-element 9 402 3.0 3.5 3.2 2.1 425 chr2L 20568670 intron CR45347 + chr2L 20568882 intron CR45347 + chr2L 20569095 intron CR45347 + chr2L_9_20565001 chr2L_20565001 RAL-406 699 chr2L 20576199 20576249 chr2L 20583687 20583697 blood 14 7481 3.5 1.0 2.2 4.4 7498 chr2L 20576199 intergenic CR45347 + chr2L 20579948 intergenic not near genes chr2L 20583697 3` UTR CR44909 - chr2L_14_20575001 chr2L_20575001 RAL-406 700 chr2L 20601767 20601814 chr2L 20601865 20601872 20 95 2.5 5.5 4.0 4.0 105 chr2L 20601767 intron CR44909 - chr2L 20601820 intron CR44909 - chr2L 20601872 intron CR44909 - chr2L_20_20600001 chr2L_20600001 RAL-406 701 chr2L 20602712 20602748 chr2L 20602820 20602856 15 107 4.0 2.5 3.2 3.6 144 chr2L 20602712 intron CR44909 - chr2L 20602784 intron CR44909 - chr2L 20602856 intron CR44909 - chr2L_15_20600001 chr2L_20600001 RAL-406 702 chr2L 20623918 20623937 chr2L 20624008 20624025 7 94 10.0 11.0 10.5 0.6 107 chr2L 20623918 intron CR44909 - chr2L 20623972 intron CR44909 - chr2L 20624025 intron CR44909 - chr2L_7_20620001 chr2L_20620001 RAL-406 703 chr2L 20715561 20715577 chr2L 20715649 20715675 5 96 9.0 13.5 11.2 0.4 114 chr2L 20715561 intergenic not near genes chr2L 20715618 intergenic not near genes chr2L 20715675 intergenic not near genes chr2L_5_20715001 chr2L_20715001 RAL-406 704 chr2L 20818495 20818538 chr2L 20818596 20818602 10 95 2.5 5.5 4.0 2.0 107 chr2L 20818495 exon CheB38a - chr2L 20818548 intergenic CheB38a - chr2L 20818602 intergenic CheB38a - chr2L_10_20815001 chr2L_20815001 RAL-406 705 chr2L 20835790 20835814 chr2L 20836527 20836551 Quasimodo 6 737 9.5 2.5 6.0 0.9 761 chr2L 20835790 5` UTR Oseg5 - chr2L 20836170 intergenic Oseg5 -,Spn38F - chr2L 20836551 intergenic Spn38F - chr2L_6_20835001 chr2L_20835001 RAL-406 706 chr2L 20835818 20835839 chr2L 20836525 20836565 Quasimodo 12 733 3.0 2.5 2.8 3.2 747 chr2L 20835818 5` UTR Oseg5 - chr2L 20836192 intergenic Oseg5 -,Spn38F - chr2L 20836565 intergenic Spn38F - chr2L_12_20835001 chr2L_20835001 RAL-406 707 chr2L 20891521 20891546 chr2L 20896639 20896652 jockey 9 5119 2.0 5.5 3.8 1.9 5131 chr2L 20891521 intron,intron CG43739 -,sky - chr2L 20894086 intron,intron CG43739 -,sky - chr2L 20896652 intron,intron CG43739 -,sky - chr2L_9_20890001 chr2L_20890001 RAL-406 708 chr2L 20901478 20901486 chr2L 20902618 20902665 1360 10 1159 1.0 2.5 1.8 3.6 1187 chr2L 20901478 intron,intron CG43739 -,sky - chr2L 20902072 intron,intron CG43739 -,sky - chr2L 20902665 intron,intron CG43739 -,sky - chr2L_10_20900001 chr2L_20900001 RAL-406 709 chr2L 20946925 20946933 chr2L 20947032 20947040 4 107 15.5 4.5 10.0 0.4 115 chr2L 20946925 intergenic CR44606 - chr2L 20946982 intergenic CR44606 - chr2L 20947040 intergenic CR44606 - chr2L_4_20945001 chr2L_20945001 RAL-406 710 chr2L 20946936 20946961 chr2L 20947031 20947059 8 103 8.5 4.5 6.5 1.1 123 chr2L 20946936 intergenic CR44606 - chr2L 20946998 intergenic CR44606 - chr2L 20947059 intergenic CR44606 - chr2L_8_20945001 chr2L_20945001 RAL-406 711 chr2L 20958025 20958073 chr2L 20958346 20958394 15 316 5.5 6.0 5.8 2.2 369 chr2L 20958025 intergenic not near genes chr2L 20958210 intergenic not near genes chr2L 20958394 intergenic not near genes chr2L_15_20955001 chr2L_20955001 RAL-406 712 chr2L 20958881 20958933 chr2L 20958986 20959015 17 100 5.0 5.0 5.0 2.8 134 chr2L 20958881 intergenic not near genes chr2L 20958948 intergenic not near genes chr2L 20959015 intergenic not near genes chr2L_17_20955001 chr2L_20955001 RAL-406 713 chr2L 20976642 20976666 chr2L 20981477 20981501 X-element 6 4834 5.5 6.5 6.0 0.9 4859 chr2L 20976642 intron CG42238 - chr2L 20979072 intron CG42238 - chr2L 20981501 intron CG42238 - chr2L_6_20975001 chr2L_20975001 RAL-406 714 chr2L 21020266 21020269 chr2L 21023953 21023965 NOF 4 3693 12.5 1.5 7.0 0.5 3699 chr2L 21020266 intron CG42238 - chr2L 21022116 intron CG42238 - chr2L 21023965 intron CG42238 - chr2L_4_21020001 chr2L_21020001 RAL-406 715 chr2L 21020274 21020307 chr2L 21023948 21024004 NOF 11 3681 3.5 1.5 2.5 3.1 3730 chr2L 21020274 intron CG42238 - chr2L 21022139 intron CG42238 - chr2L 21024004 intron CG42238 - chr2L_11_21020001 chr2L_21020001 RAL-406 716 chr2L 21041151 21041162 chr2L 21049400 21049418 Tirant 6 8260 5.5 5.0 5.2 1.0 8267 chr2L 21041151 intron CG42238 - chr2L 21045284 intron CG42238 - chr2L 21049418 intron CG42238 - chr2L_6_21045001 chr2L_21045001 RAL-406 717 chr2L 21110633 21110670 chr2L 21110738 21110775 11 104 5.0 6.5 5.8 1.6 142 chr2L 21110633 intron Nhe2 + chr2L 21110704 intron Nhe2 + chr2L 21110775 intron Nhe2 + chr2L_11_21110001 chr2L_21110001 RAL-406 718 chr2L 21110671 21110685 chr2L 21110734 21110785 9 100 2.0 5.5 3.8 1.9 114 chr2L 21110671 intron Nhe2 + chr2L 21110728 intron Nhe2 + chr2L 21110785 intron Nhe2 + chr2L_9_21110001 chr2L_21110001 RAL-406 719 chr2L 21118236 21118277 chr2L 21118415 21118468 18 186 4.0 7.5 5.8 2.6 232 chr2L 21118236 intron Nhe2 + chr2L 21118352 intron Nhe2 + chr2L 21118468 intron Nhe2 + chr2L_18_21115001 chr2L_21115001 RAL-406 720 chr2L 21199232 21199257 chr2L 21199308 21199354 10 92 4.5 1.5 3.0 2.5 122 chr2L 21199232 intergenic CG31624 -,Ret - chr2L 21199293 3` UTR CG31624 - chr2L 21199354 3` UTR CG31624 - chr2L_10_21195001 chr2L_21195001 RAL-406 721 chr2L 21218959 21219010 chr2L 21219253 21219304 23 292 3.0 6.0 4.5 4.2 345 chr2L 21218959 intron Atg18b - chr2L 21219132 intron Atg18b - chr2L 21219304 intron Atg18b - chr2L_23_21215001 chr2L_21215001 RAL-406 722 chr2L 21246490 21246535 chr2L 21246605 21246650 12 108 8.0 3.0 5.5 1.8 160 chr2L 21246490 intron Hr39 + chr2L 21246570 intron Hr39 + chr2L 21246650 intron Hr39 + chr2L_12_21245001 chr2L_21245001 RAL-406 723 chr2L 21347529 21347578 chr2L 21355021 21355065 blood 13 7490 6.5 8.5 7.5 1.5 7536 chr2L 21347529 intron Tsp39D + chr2L 21351297 intron Tsp39D + chr2L 21355065 intron Tsp39D + chr2L_13_21350001 chr2L_21350001 RAL-406 724 chr2L 21355592 21355638 chr2L 21355751 21355803 20 159 7.5 6.0 6.8 2.6 211 chr2L 21355592 exon Tsp39D + chr2L 21355698 intron Tsp39D + chr2L 21355803 intron Tsp39D + chr2L_20_21355001 chr2L_21355001 RAL-406 725 chr2L 21597036 21597059 chr2L 21604787 21604816 roo 10 7759 4.5 7.5 6.0 1.4 7780 chr2L 21597036 intergenic not near genes chr2L 21600926 intergenic not near genes chr2L 21604816 intergenic not near genes chr2L_10_21600001 chr2L_21600001 RAL-406 726 chr2L 21740064 21740111 chr2L 21740182 21740229 20 117 3.0 5.5 4.2 3.8 165 chr2L 21740064 3` UTR step - chr2L 21740146 3` UTR step - chr2L 21740229 3` UTR step - chr2L_20_21740001 chr2L_21740001 RAL-406 727 chr2L 21748595 21748635 chr2L 21749892 21749932 14 1299 30.0 41.0 35.5 0.4 1337 chr2L 21748595 intron step - chr2L 21749264 intron step - chr2L 21749932 intron step - chr2L_14_21745001 chr2L_21745001 RAL-406 728 chr2L 21852355 21852404 chr2L 21852690 21852724 18 332 5.0 3.0 4.0 3.6 369 chr2L 21852355 intergenic not near genes chr2L 21852540 intergenic not near genes chr2L 21852724 intergenic not near genes chr2L_18_21850001 chr2L_21850001 RAL-406 729 chr2L 21855458 21855508 chr2L 21855564 21855605 20 101 2.0 2.0 2.0 6.7 147 chr2L 21855458 intron CR44917 + chr2L 21855532 intron CR44917 + chr2L 21855605 intron CR44917 + chr2L_20_21855001 chr2L_21855001 RAL-406 730 chr2L 21859300 21859347 chr2L 21859400 21859447 14 96 5.0 2.0 3.5 3.1 147 chr2L 21859300 intron CR44917 + chr2L 21859374 intron CR44917 + chr2L 21859447 intron CR44917 + chr2L_14_21855001 chr2L_21855001 RAL-406 731 chr2L 21903285 21903316 chr2L 21903425 21903456 5 142 9.5 3.0 6.2 0.7 171 chr2L 21903285 exon CG1421 + chr2L 21903370 exon CG1421 + chr2L 21903456 exon CG1421 + chr2L_5_21900001 chr2L_21900001 RAL-406 732 chr2L 21981665 21981713 chr2L 21990850 21990872 roo 16 9181 4.5 6.0 5.2 2.6 9207 chr2L 21981665 exon CG2528 - chr2L 21986268 intron CG2528 - chr2L 21990872 exon CG2528 - chr2L_16_21985001 chr2L_21985001 RAL-406 733 chr2L 22001631 22001673 chr2L 22001727 22001763 23 92 5.5 4.0 4.8 4.0 132 chr2L 22001631 intergenic not near genes chr2L 22001697 intergenic not near genes chr2L 22001763 intergenic not near genes chr2L_23_22000001 chr2L_22000001 RAL-406 734 chr2L 22007922 22007946 chr2L 22008014 22008048 7 97 8.0 6.0 7.0 0.9 126 chr2L 22007922 intergenic not near genes chr2L 22007985 intergenic not near genes chr2L 22008048 intergenic not near genes chr2L_7_22005001 chr2L_22005001 RAL-406 735 chr2L 22025814 22025846 chr2L 22025913 22025945 4 98 2.5 7.5 5.0 0.7 131 chr2L 22025814 intergenic tio + chr2L 22025880 intergenic tio + chr2L 22025945 intergenic tio + chr2L_4_22025001 chr2L_22025001 RAL-406 736 chr2L 22035192 22035232 chr2L 22035284 22035329 11 94 8.5 5.0 6.8 1.4 137 chr2L 22035192 intergenic not near genes chr2L 22035260 intergenic not near genes chr2L 22035329 intergenic not near genes chr2L_11_22035001 chr2L_22035001 RAL-406 737 chr2L 22047235 22047256 chr2L 22047380 22047401 8 144 3.0 8.5 5.8 1.2 166 chr2L 22047235 intergenic not near genes chr2L 22047318 intergenic not near genes chr2L 22047401 intergenic not near genes chr2L_8_22045001 chr2L_22045001 RAL-406 738 chr2L 22090602 22090635 chr2L 22090700 22090701 7 92 9.0 5.5 7.2 0.9 99 chr2L 22090602 intergenic not near genes chr2L 22090652 intergenic not near genes chr2L 22090701 intergenic not near genes chr2L_7_22090001 chr2L_22090001 RAL-406 739 chr2L 22179526 22179574 chr2L 22179618 22179649 21 92 5.0 3.5 4.2 4.0 123 chr2L 22179526 intron CG3635 + chr2L 22179588 intron CG3635 + chr2L 22179649 intron CG3635 + chr2L_21_22175001 chr2L_22175001 RAL-406 740 chr2L 22192005 22192054 chr2L 22192114 22192153 5 103 9.5 4.5 7.0 0.6 148 chr2L 22192005 intron Ir40a - chr2L 22192079 intron Ir40a - chr2L 22192153 intron Ir40a - chr2L_5_22190001 chr2L_22190001 RAL-406 741 chr2L 22212117 22212163 chr2L 22212684 22212710 16 565 6.5 4.0 5.2 2.6 593 chr2L 22212117 intron Ir40a - chr2L 22212414 intron Ir40a - chr2L 22212710 intron Ir40a - chr2L_16_22210001 chr2L_22210001 RAL-406 742 chr2L 22215894 22215932 chr2L 22216000 22216028 4 104 8.0 14.0 11.0 0.3 134 chr2L 22215894 intergenic not near genes chr2L 22215961 intergenic not near genes chr2L 22216028 intergenic not near genes chr2L_4_22215001 chr2L_22215001 RAL-406 743 chr2L 22239444 22239460 chr2L 22239511 22239536 13 86 4.0 8.0 6.0 1.9 92 chr2L 22239444 3` UTR CR43765 - chr2L 22239490 3` UTR CR43765 - chr2L 22239536 3` UTR CR43765 - chr2L_13_22235001 chr2L_22235001 RAL-406 744 chr2L 22249492 22249532 chr2L 22249597 22249637 7 104 9.0 3.0 6.0 1.0 145 chr2L 22249492 intergenic Tif-IA + chr2L 22249564 intergenic Tif-IA + chr2L 22249637 intergenic Tif-IA + chr2L_7_22245001 chr2L_22245001 RAL-406 745 chr2L 22258603 22258611 chr2L 22260747 22260755 G6 5 2144 11.0 7.5 9.2 0.5 2152 chr2L 22258603 intergenic Tif-IA + chr2L 22259679 intergenic not near genes chr2L 22260755 intergenic not near genes chr2L_5_22255001 chr2L_22255001 RAL-406 746 chr2L 22258612 22258648 chr2L 22260745 22260782 G6 20 2141 4.5 7.0 5.8 2.9 2170 chr2L 22258612 intergenic Tif-IA + chr2L 22259697 intergenic not near genes chr2L 22260782 intergenic not near genes chr2L_20_22255001 chr2L_22255001 RAL-406 747 chr2L 22548923 22548939 chr2L 22550158 22550180 1360 8 1241 0.0 13.5 6.8 1.0 1257 chr2L 22548923 intergenic CG17490 + chr2L 22549552 intergenic not near genes chr2L 22550180 intergenic CG17493 + chr2L_8_22545001 chr2L_22545001 RAL-406 748 chr2L 22581951 22582000 chr2L 22583760 22583809 S-element 19 1806 7.5 4.5 6.0 2.7 1858 chr2L 22581951 intron CG17494 + chr2L 22582880 intron CG17494 + chr2L 22583809 intron CG17494 + chr2L_19_22580001 chr2L_22580001 RAL-406 749 chr2L 22706793 22706833 chr2L 22706916 22706956 15 121 5.0 5.0 5.0 2.5 163 chr2L 22706793 intron CG40006 - chr2L 22706874 intron CG40006 - chr2L 22706956 intron CG40006 - chr2L_15_22705001 chr2L_22705001 RAL-406 750 chr2L 22776401 22776446 chr2L 22778210 22778255 S-element 18 1808 6.5 5.0 5.8 2.6 1854 chr2L 22776401 intergenic not near genes chr2L 22777328 intergenic not near genes chr2L 22778255 intergenic not near genes chr2L_18_22775001 chr2L_22775001 RAL-406 751 chr2R 469972 469980 chr2R 473228 473241 F-element 4 3258 3.0 8.0 5.5 0.6 3269 chr2R 469972 intergenic not near genes chr2R 471606 intergenic not near genes chr2R 473241 intergenic not near genes chr2R_4_470001 chr2R_470001 RAL-406 752 chr2R 698946 698961 chr2R 699013 699021 5 66 3.5 1.5 2.5 1.4 75 chr2R 698946 intron CG43676 + chr2R 698984 intron CG43676 + chr2R 699021 intron CG43676 + chr2R_5_695001 chr2R_695001 RAL-406 753 chr2R 1082369 1082382 chr2R 1087134 1087177 Doc 4 4788 1.5 5.5 3.5 0.9 4808 chr2R 1082369 intron rl + chr2R 1084773 intron rl + chr2R 1087177 intron rl + chr2R_4_1080001 chr2R_1080001 RAL-406 754 chr2R 1365850 1365896 chr2R 1365982 1366028 19 125 3.5 7.0 5.2 3.1 178 chr2R 1365850 intron l(2)41Ab + chr2R 1365939 intron l(2)41Ab + chr2R 1366028 intron l(2)41Ab + chr2R_19_1365001 chr2R_1365001 RAL-406 755 chr2R 1516586 1516603 chr2R 1521334 1521351 1731 9 4748 28.5 11.5 20.0 0.4 4765 chr2R 1516586 exon Maf1 - chr2R 1518968 intron Maf1 - chr2R 1521351 5` UTR Maf1 - chr2R_9_1515001 chr2R_1515001 RAL-406 756 chr2R 1755930 1755966 chr2R 1756064 1756100 8 132 4.5 2.0 3.2 1.9 170 chr2R 1755930 intron CG41520 + chr2R 1756015 intron CG41520 + chr2R 1756100 intron CG41520 + chr2R_8_1755001 chr2R_1755001 RAL-406 757 chr2R 2015118 2015164 chr2R 2015207 2015261 18 93 6.0 4.0 5.0 3.0 143 chr2R 2015118 intron CG17684 - chr2R 2015190 intron CG17684 - chr2R 2015261 intron CG17684 - chr2R_18_2015001 chr2R_2015001 RAL-406 758 chr2R 2498966 2499017 chr2R 2508133 2508184 roo 23 9164 7.0 6.0 6.5 3.1 9218 chr2R 2498966 intron MFS17 - chr2R 2503575 intron MFS17 - chr2R 2508184 intron MFS17 - chr2R_23_2500001 chr2R_2500001 RAL-406 759 chr2R 2508300 2508339 chr2R 2508458 2508492 11 153 5.0 4.5 4.8 1.9 192 chr2R 2508300 intron MFS17 - chr2R 2508396 intron MFS17 - chr2R 2508492 intron MFS17 - chr2R_11_2505001 chr2R_2505001 RAL-406 760 chr2R 2938237 2938274 chr2R 2938322 2938360 7 96 8.5 14.0 11.2 0.6 123 chr2R 2938237 intron Scp1 - chr2R 2938298 intron Scp1 - chr2R 2938360 intron Scp1 - chr2R_7_2935001 chr2R_2935001 RAL-406 761 chr2R 3144071 3144110 chr2R 3393366 3393408 Doc 4 249297 17.0 4.0 10.5 0.3 249337 chr2R 3144071 intron CG42596 + chr2R 3268740 intergenic not near genes chr2R 3393408 intergenic not near genes chr2R_4_3265001 chr2R_3265001 RAL-406 762 chr2R 3291929 3292100 chr2R 3915118 3915281 4 623184 8.5 22.0 15.2 0.2 623352 chr2R 3291929 intergenic not near genes chr2R 3603605 intergenic not near genes chr2R 3915281 intron uex - chr2R_4_3600001 chr2R_3600001 RAL-406 763 chr2R 3515268 3515314 chr2R 3515376 3515422 12 107 27.0 24.5 25.8 0.4 154 chr2R 3515268 intergenic not near genes chr2R 3515345 intergenic not near genes chr2R 3515422 intergenic not near genes chr2R_12_3515001 chr2R_3515001 RAL-406 764 chr2R 3532604 3532643 chr2R 3536067 3536102 Doc 11 3463 4.0 5.0 4.5 2.0 3498 chr2R 3532604 intergenic not near genes chr2R 3534353 intergenic not near genes chr2R 3536102 intergenic not near genes chr2R_11_3530001 chr2R_3530001 RAL-406 765 chr2R 4138633 4138672 chr2R 4138730 4138769 12 94 7.0 8.5 7.8 1.4 136 chr2R 4138633 intergenic not near genes chr2R 4138701 intergenic not near genes chr2R 4138769 intergenic not near genes chr2R_12_4135001 chr2R_4135001 RAL-406 766 chr2R 4270178 4270208 chr2R 4270291 4270326 13 117 6.0 9.5 7.8 1.5 148 chr2R 4270178 intergenic not near genes chr2R 4270252 intergenic not near genes chr2R 4270326 intergenic not near genes chr2R_13_4270001 chr2R_4270001 RAL-406 767 chr2R 4312948 4312985 chr2R 4313041 4313080 15 102 1.5 2.0 1.8 5.4 132 chr2R 4312948 intergenic not near genes chr2R 4313014 intergenic not near genes chr2R 4313080 intergenic not near genes chr2R_15_4310001 chr2R_4310001 RAL-406 768 chr2R 4430355 4430385 chr2R 4430469 4430495 6 111 4.0 7.0 5.5 0.9 140 chr2R 4430355 intron Gprk1 - chr2R 4430425 intron Gprk1 - chr2R 4430495 intron Gprk1 - chr2R_6_4430001 chr2R_4430001 RAL-406 769 chr2R 4624341 4624378 chr2R 4624481 4624518 18 137 8.0 7.0 7.5 2.1 177 chr2R 4624341 intergenic not near genes chr2R 4624430 intergenic not near genes chr2R 4624518 intergenic not near genes chr2R_18_4620001 chr2R_4620001 RAL-406 770 chr2R 4750324 4750327 chr2R 4751501 4751504 1360 4 1177 15.0 5.5 10.2 0.4 1180 chr2R 4750324 intron conu + chr2R 4750914 intron conu + chr2R 4751504 intron conu + chr2R_4_4750001 chr2R_4750001 RAL-406 771 chr2R 4750333 4750374 chr2R 4751500 4751505 1360 5 1160 6.5 5.5 6.0 0.7 1172 chr2R 4750333 intron conu + chr2R 4750919 intron conu + chr2R 4751505 intron conu + chr2R_5_4750001 chr2R_4750001 RAL-406 772 chr2R 4784111 4784146 chr2R 4784243 4784288 21 137 5.0 5.5 5.2 3.4 177 chr2R 4784111 intergenic not near genes chr2R 4784200 intergenic not near genes chr2R 4784288 intergenic not near genes chr2R_21_4780001 chr2R_4780001 RAL-406 773 chr2R 5078647 5078699 chr2R 5078888 5078890 29 233 5.0 4.5 4.8 5.0 243 chr2R 5078647 intergenic not near genes chr2R 5078768 intergenic not near genes chr2R 5078890 intergenic not near genes chr2R_29_5075001 chr2R_5075001 RAL-406 774 chr2R 5096649 5096667 chr2R 5096747 5096768 7 99 7.5 14.0 10.8 0.6 119 chr2R 5096649 intergenic not near genes chr2R 5096708 intergenic not near genes chr2R 5096768 intergenic not near genes chr2R_7_5095001 chr2R_5095001 RAL-406 775 chr2R 5096670 5096682 chr2R 5096740 5096783 8 91 5.0 11.0 8.0 0.9 113 chr2R 5096670 intergenic not near genes chr2R 5096726 intergenic not near genes chr2R 5096783 intergenic not near genes chr2R_8_5095001 chr2R_5095001 RAL-406 776 chr2R 5103025 5103073 chr2R 5103126 5103135 8 96 7.0 0.5 3.8 1.7 110 chr2R 5103025 intergenic not near genes chr2R 5103080 intergenic not near genes chr2R 5103135 intergenic not near genes chr2R_8_5100001 chr2R_5100001 RAL-406 777 chr2R 5125234 5125250 chr2R 5125570 5125588 5 335 6.5 4.0 5.2 0.8 354 chr2R 5125234 intron gus - chr2R 5125411 intron gus - chr2R 5125588 intron gus - chr2R_5_5125001 chr2R_5125001 RAL-406 778 chr2R 5125251 5125271 chr2R 5125568 5125602 5 324 3.5 4.0 3.8 1.0 351 chr2R 5125251 intron gus - chr2R 5125426 intron gus - chr2R 5125602 intron gus - chr2R_5_5125001 chr2R_5125001 RAL-406 779 chr2R 5150576 5150585 chr2R 5150678 5150687 5 101 8.0 4.5 6.2 0.7 111 chr2R 5150576 intron Atf6 + chr2R 5150632 intron Atf6 + chr2R 5150687 intron Atf6 + chr2R_5_5150001 chr2R_5150001 RAL-406 780 chr2R 5150587 5150625 chr2R 5150676 5150726 9 96 2.5 4.0 3.2 2.1 139 chr2R 5150587 intron Atf6 + chr2R 5150656 intron Atf6 + chr2R 5150726 intron Atf6 + chr2R_9_5150001 chr2R_5150001 RAL-406 781 chr2R 5192235 5192487 chr2R 5192329 5192594 7 97 1.5 0.0 0.8 3.9 359 chr2R 5192235 intron Nipped-A - chr2R 5192414 intron Nipped-A - chr2R 5192594 intron Nipped-A - chr2R_7_5190001 chr2R_5190001 RAL-406 782 chr2R 5209770 5209808 chr2R 5210323 5210361 11 551 4.5 6.5 5.5 1.7 591 chr2R 5209770 intron Nipped-A - chr2R 5210066 intron Nipped-A - chr2R 5210361 intron Nipped-A - chr2R_11_5210001 chr2R_5210001 RAL-406 783 chr2R 5237334 5237371 chr2R 5237430 5237473 8 98 5.5 5.5 5.5 1.2 139 chr2R 5237334 intron Nipped-A - chr2R 5237404 intron Nipped-A - chr2R 5237473 intron Nipped-A - chr2R_8_5235001 chr2R_5235001 RAL-406 784 chr2R 5363494 5363513 chr2R 5363564 5363601 10 87 5.0 4.0 4.5 1.8 107 chr2R 5363494 5` UTR CR42646 + chr2R 5363548 intron CR42646 + chr2R 5363601 intron CR42646 + chr2R_10_5360001 chr2R_5360001 RAL-406 785 chr2R 5417981 5418027 chr2R 5420630 5420679 Burdock 17 2650 5.0 8.5 6.8 2.2 2698 chr2R 5417981 intron laccase2 + chr2R 5419330 intron laccase2 + chr2R 5420679 intron laccase2 + chr2R_17_5415001 chr2R_5415001 RAL-406 786 chr2R 5473354 5473400 chr2R 5473469 5473515 13 110 2.0 3.0 2.5 3.7 161 chr2R 5473354 intron CG30440 - chr2R 5473434 intron CG30440 - chr2R 5473515 intron CG30440 - chr2R_13_5470001 chr2R_5470001 RAL-406 787 chr2R 5475432 5475480 chr2R 5475716 5475764 13 284 3.5 2.0 2.8 3.4 332 chr2R 5475432 intron CG30440 - chr2R 5475598 intron CG30440 - chr2R 5475764 intron CG30440 - chr2R_13_5475001 chr2R_5475001 RAL-406 788 chr2R 5476333 5476385 chr2R 5476896 5476944 10 562 1.5 5.5 3.5 2.2 611 chr2R 5476333 intron CG30440 - chr2R 5476638 intron CG30440 - chr2R 5476944 intron CG30440 - chr2R_10_5475001 chr2R_5475001 RAL-406 789 chr2R 5491702 5491745 chr2R 5491858 5491906 24 156 3.0 8.5 5.8 3.5 204 chr2R 5491702 intron CG30440 - chr2R 5491804 intron CG30440 - chr2R 5491906 intron CG30440 - chr2R_24_5490001 chr2R_5490001 RAL-406 790 chr2R 5509507 5509549 chr2R 5509623 5509655 18 114 2.5 5.5 4.0 3.6 148 chr2R 5509507 intron CG30438 + chr2R 5509581 intron CG30438 + chr2R 5509655 intron CG30438 + chr2R_18_5505001 chr2R_5505001 RAL-406 791 chr2R 5543197 5543204 chr2R 5547301 5547308 invader1 4 4104 0.5 18.0 9.2 0.4 4111 chr2R 5543197 intron CG30438 + chr2R 5545252 intron CG30438 + chr2R 5547308 intron CG30438 + chr2R_4_5545001 chr2R_5545001 RAL-406 792 chr2R 5543205 5543221 chr2R 5547292 5547325 invader1 13 4100 0.0 15.0 7.5 1.5 4120 chr2R 5543205 intron CG30438 + chr2R 5545265 intron CG30438 + chr2R 5547325 intron CG30438 + chr2R_13_5545001 chr2R_5545001 RAL-406 793 chr2R 5550027 5550051 chr2R 5550164 5550188 5 127 6.0 7.5 6.8 0.6 161 chr2R 5550027 intergenic CG30438 + chr2R 5550108 intergenic not near genes chr2R 5550188 intergenic not near genes chr2R_5_5550001 chr2R_5550001 RAL-406 794 chr2R 5581403 5581425 chr2R 5627631 5627636 7 46224 0.5 11.0 5.8 1.0 46233 chr2R 5581403 intergenic not near genes chr2R 5604520 intron Fis1 - chr2R 5627636 intergenic not near genes chr2R_7_5600001 chr2R_5600001 RAL-406 795 chr2R 5129492 5129497 chr2R 5665161 5665166 4 535669 26.0 9.0 17.5 0.2 535674 chr2R 5129492 intergenic CR43256 + chr2R 5397329 intergenic not near genes chr2R 5665166 intron CR45472 + chr2R_4_5395001 chr2R_5395001 RAL-406 796 chr2R 5710629 5710679 chr2R 5710726 5710763 16 91 2.5 5.5 4.0 3.2 134 chr2R 5710629 intron ap - chr2R 5710696 intron ap - chr2R 5710763 intron ap - chr2R_16_5710001 chr2R_5710001 RAL-406 797 chr2R 5750432 5750453 chr2R 5750544 5750565 15 111 11.5 9.5 10.5 1.3 133 chr2R 5750432 intergenic not near genes chr2R 5750498 intergenic not near genes chr2R 5750565 intergenic not near genes chr2R_15_5750001 chr2R_5750001 RAL-406 798 chr2R 5772510 5772550 chr2R 5772624 5772664 6 107 2.0 7.5 4.8 1.0 154 chr2R 5772510 3` UTR Gp210 + chr2R 5772587 3` UTR Gp210 + chr2R 5772664 3` UTR Gp210 + chr2R_6_5770001 chr2R_5770001 RAL-406 799 chr2R 5772816 5772853 chr2R 5772918 5772955 21 101 6.5 5.5 6.0 3.0 139 chr2R 5772816 3` UTR Gp210 + chr2R 5772886 3` UTR Gp210 + chr2R 5772955 3` UTR Gp210 + chr2R_21_5770001 chr2R_5770001 RAL-406 800 chr2R 5790443 5790496 chr2R 5790548 5790601 24 103 3.0 5.5 4.2 4.6 158 chr2R 5790443 intergenic not near genes chr2R 5790522 intergenic not near genes chr2R 5790601 intergenic not near genes chr2R_24_5790001 chr2R_5790001 RAL-406 801 chr2R 5835917 5835961 chr2R 5836033 5836077 19 112 7.5 10.0 8.8 1.9 160 chr2R 5835917 intron dpr12 + chr2R 5835997 intron dpr12 + chr2R 5836077 intron dpr12 + chr2R_19_5835001 chr2R_5835001 RAL-406 802 chr2R 5869258 5869292 chr2R 5874354 5874370 flea 11 5088 14.5 5.5 10.0 1.0 5112 chr2R 5869258 intergenic not near genes chr2R 5871814 intergenic not near genes chr2R 5874370 intergenic not near genes chr2R_11_5870001 chr2R_5870001 RAL-406 803 chr2R 5869293 5869307 chr2R 5874353 5874393 flea 10 5084 8.5 5.5 7.0 1.2 5100 chr2R 5869293 intergenic not near genes chr2R 5871843 intergenic not near genes chr2R 5874393 intergenic not near genes chr2R_10_5870001 chr2R_5870001 RAL-406 804 chr2R 5885347 5885371 chr2R 5885496 5885520 9 149 5.5 1.5 3.5 2.0 173 chr2R 5885347 5` UTR CR44125 + chr2R 5885434 5` UTR CR44125 + chr2R 5885520 5` UTR CR44125 + chr2R_9_5885001 chr2R_5885001 RAL-406 805 chr2R 5902146 5902193 chr2R 5909715 5909772 17.6 12 7578 6.5 6.0 6.2 1.7 7626 chr2R 5902146 intron CG43366 + chr2R 5905959 intron CG43366 + chr2R 5909772 intron CG43366 + chr2R_12_5905001 chr2R_5905001 RAL-406 806 chr2R 5932781 5932823 chr2R 5932876 5932912 22 98 6.0 5.0 5.5 3.4 131 chr2R 5932781 intergenic not near genes chr2R 5932846 intergenic not near genes chr2R 5932912 intergenic not near genes chr2R_22_5930001 chr2R_5930001 RAL-406 807 chr2R 5952902 5952942 chr2R 5953000 5953040 15 97 8.0 2.5 5.2 2.4 138 chr2R 5952902 intergenic not near genes chr2R 5952971 intergenic not near genes chr2R 5953040 intergenic not near genes chr2R_15_5950001 chr2R_5950001 RAL-406 808 chr2R 6033427 6033474 chr2R 6033532 6033559 10 98 4.0 8.5 6.2 1.4 132 chr2R 6033427 intron SCAP - chr2R 6033493 intron SCAP - chr2R 6033559 intron SCAP - chr2R_10_6030001 chr2R_6030001 RAL-406 809 chr2R 6088358 6088368 chr2R 6088471 6088481 6 113 7.5 6.5 7.0 0.8 123 chr2R 6088358 intergenic not near genes chr2R 6088420 intergenic not near genes chr2R 6088481 intergenic not near genes chr2R_6_6085001 chr2R_6085001 RAL-406 810 chr2R 6088369 6088387 chr2R 6088482 6088500 10 112 6.0 9.5 7.8 1.1 131 chr2R 6088369 intergenic not near genes chr2R 6088434 intergenic not near genes chr2R 6088500 intergenic not near genes chr2R_10_6085001 chr2R_6085001 RAL-406 811 chr2R 6178666 6178673 chr2R 6178773 6178780 4 107 9.0 7.0 8.0 0.4 114 chr2R 6178666 intergenic not near genes chr2R 6178723 intergenic not near genes chr2R 6178780 intergenic not near genes chr2R_4_6175001 chr2R_6175001 RAL-406 812 chr2R 6178679 6178713 chr2R 6178765 6178820 11 101 5.0 6.0 5.5 1.7 141 chr2R 6178679 intergenic not near genes chr2R 6178750 intergenic not near genes chr2R 6178820 intergenic not near genes chr2R_11_6175001 chr2R_6175001 RAL-406 813 chr2R 6194670 6194704 chr2R 6194770 6194777 7 95 3.5 1.5 2.5 2.0 107 chr2R 6194670 intron Ptr - chr2R 6194724 intron Ptr - chr2R 6194777 intron Ptr - chr2R_7_6190001 chr2R_6190001 RAL-406 814 chr2R 6236707 6236736 chr2R 6236834 6236863 14 127 2.0 4.5 3.2 3.3 156 chr2R 6236707 intron bin3 + chr2R 6236785 intron bin3 + chr2R 6236863 intron bin3 + chr2R_14_6235001 chr2R_6235001 RAL-406 815 chr2R 6494532 6494542 chr2R 6499314 6499324 F-element 4 4782 1.5 3.5 2.5 1.1 4792 chr2R 6494532 intergenic not near genes chr2R 6496928 intergenic not near genes chr2R 6499324 intergenic not near genes chr2R_4_6495001 chr2R_6495001 RAL-406 816 chr2R 6530750 6530798 chr2R 6530850 6530898 17 99 6.0 4.5 5.2 2.7 148 chr2R 6530750 intron jing + chr2R 6530824 intron jing + chr2R 6530898 intron jing + chr2R_17_6530001 chr2R_6530001 RAL-406 817 chr2R 6579779 6579806 chr2R 6584886 6584913 flea 13 5107 4.5 5.0 4.8 2.2 5134 chr2R 6579779 intron jing + chr2R 6582346 intron jing + chr2R 6584913 intron jing + chr2R_13_6580001 chr2R_6580001 RAL-406 818 chr2R 6597854 6597906 chr2R 6597962 6598002 15 102 5.5 7.5 6.5 2.0 148 chr2R 6597854 intron jing + chr2R 6597928 intron jing + chr2R 6598002 intron jing + chr2R_15_6595001 chr2R_6595001 RAL-406 819 chr2R 6607910 6607955 chr2R 6608032 6608077 16 115 7.0 5.5 6.2 2.2 167 chr2R 6607910 intron jing + chr2R 6607994 intron jing + chr2R 6608077 intron jing + chr2R_16_6605001 chr2R_6605001 RAL-406 820 chr2R 6685859 6685890 chr2R 6685961 6685992 14 102 6.0 6.5 6.2 1.9 133 chr2R 6685859 intron,intron CG9422 +,Tdc2 - chr2R 6685926 intron,intron CG9422 +,Tdc2 - chr2R 6685992 intron,intron CG9422 +,Tdc2 - chr2R_14_6685001 chr2R_6685001 RAL-406 821 chr2R 6691105 6691157 chr2R 6691204 6691256 26 98 6.0 5.5 5.8 3.8 151 chr2R 6691105 intron CG9422 + chr2R 6691180 intron CG9422 + chr2R 6691256 intron CG9422 + chr2R_26_6690001 chr2R_6690001 RAL-406 822 chr2R 6699570 6699622 chr2R 6699675 6699727 22 103 7.0 7.0 7.0 2.8 157 chr2R 6699570 intergenic Rab2 + chr2R 6699648 intergenic Rab2 + chr2R 6699727 intergenic Rab2 +,CG3409 -,CG45092 - chr2R_22_6695001 chr2R_6695001 RAL-406 823 chr2R 6710721 6710736 chr2R 6710902 6710949 7 201 1.0 7.0 4.0 1.4 228 chr2R 6710721 intron,intron CG3409 -,CG45092 - chr2R 6710835 intron,intron CG3409 -,CG45092 - chr2R 6710949 intron,intron CG3409 -,CG45092 - chr2R_7_6710001 chr2R_6710001 RAL-406 824 chr2R 6897772 6897776 chr2R 6897894 6897902 4 128 4.0 2.5 3.2 1.0 130 chr2R 6897772 intron CG30158 + chr2R 6897837 intron CG30158 + chr2R 6897902 intron CG30158 + chr2R_4_6895001 chr2R_6895001 RAL-406 825 chr2R 6897778 6897787 chr2R 6897891 6897918 4 120 2.5 1.5 2.0 1.3 140 chr2R 6897778 intron CG30158 + chr2R 6897848 intron CG30158 + chr2R 6897918 intron CG30158 + chr2R_4_6895001 chr2R_6895001 RAL-406 826 chr2R 6948061 6948110 chr2R 6948157 6948201 24 94 8.0 3.5 5.8 3.5 140 chr2R 6948061 intron,intron mim -,CheB42c - chr2R 6948131 intron,intron mim -,CheB42c - chr2R 6948201 intron,intron mim -,CheB42c - chr2R_24_6945001 chr2R_6945001 RAL-406 827 chr2R 6952156 6952184 chr2R 6959750 6959784 opus 12 7596 3.5 5.5 4.5 2.2 7628 chr2R 6952156 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R 6955970 intron,intron mim -,CheB42c - chr2R 6959784 intron,intron mim -,CheB42c - chr2R_12_6955001 chr2R_6955001 RAL-406 828 chr2R 7097896 7097911 chr2R 7097998 7098002 5 97 3.5 5.0 4.2 1.0 106 chr2R 7097896 intron esn + chr2R 7097949 intron esn + chr2R 7098002 intron esn + chr2R_5_7095001 chr2R_7095001 RAL-406 829 chr2R 7196554 7196604 chr2R 7201349 7201364 F-element 22 4792 5.0 12.5 8.8 2.2 4810 chr2R 7196554 intron pk + chr2R 7198959 intron pk + chr2R 7201364 intron pk + chr2R_22_7195001 chr2R_7195001 RAL-406 830 chr2R 7209861 7209874 chr2R 7217642 7217655 roo 6 7781 3.5 9.5 6.5 0.8 7794 chr2R 7209861 intron pk + chr2R 7213758 intron pk + chr2R 7217655 intron pk + chr2R_6_7210001 chr2R_7210001 RAL-406 831 chr2R 7235810 7235847 chr2R 7240912 7240913 jockey 7 5101 14.0 6.0 10.0 0.6 5103 chr2R 7235810 intergenic not near genes chr2R 7238362 intergenic not near genes chr2R 7240913 intergenic not near genes chr2R_7_7235001 chr2R_7235001 RAL-406 832 chr2R 7235241 7235283 chr2R 7247704 7247756 17 12467 50.0 77.0 63.5 0.3 12515 chr2R 7235241 intergenic Or43a - chr2R 7241498 intergenic not near genes chr2R 7247756 intergenic not near genes chr2R_17_7240001 chr2R_7240001 RAL-406 833 chr2R 7244874 7244889 chr2R 7251008 7251019 7 6131 85.5 41.0 63.2 0.1 6145 chr2R 7244874 intron Ady43A - chr2R 7247946 intergenic not near genes chr2R 7251019 intergenic Gadd45 + chr2R_7_7245001 chr2R_7245001 RAL-406 834 chr2R 7244870 7244911 chr2R 7251021 7251043 8 6135 86.0 37.5 61.8 0.1 6173 chr2R 7244870 intron Ady43A - chr2R 7247956 intergenic not near genes chr2R 7251043 intergenic Gadd45 + chr2R_8_7245001 chr2R_7245001 RAL-406 835 chr2R 7328122 7328153 chr2R 7328246 7328284 13 125 3.0 4.5 3.8 2.7 162 chr2R 7328122 intron,intron Dscam1 -,CR45129 + chr2R 7328203 intron,intron Dscam1 -,CR45129 + chr2R 7328284 intron,intron Dscam1 -,CR45129 + chr2R_13_7325001 chr2R_7325001 RAL-406 836 chr2R 7378949 7379003 chr2R 7379069 7379123 25 114 2.5 4.0 3.2 6.0 174 chr2R 7378949 intron Dscam1 - chr2R 7379036 intron Dscam1 - chr2R 7379123 intron Dscam1 - chr2R_25_7375001 chr2R_7375001 RAL-406 837 chr2R 7405730 7405763 chr2R 7410220 7410262 19 4496 57.5 23.0 40.2 0.5 4532 chr2R 7405730 intron Eaf - chr2R 7407996 intergenic Eaf -,CG1701 - chr2R 7410262 intergenic not near genes chr2R_19_7405001 chr2R_7405001 RAL-406 838 chr2R 7417883 7418169 chr2R 7417989 7418252 26 97 6.5 9.5 8.0 2.9 369 chr2R 7417883 intergenic not near genes chr2R 7418068 intergenic not near genes chr2R 7418252 intergenic not near genes chr2R_26_7415001 chr2R_7415001 RAL-406 839 chr2R 7434877 7434911 chr2R 7439198 7439232 Juan 10 4320 5.5 8.0 6.8 1.3 4355 chr2R 7434877 intergenic so + chr2R 7437054 intergenic not near genes chr2R 7439232 intergenic not near genes chr2R_10_7435001 chr2R_7435001 RAL-406 840 chr2R 7459262 7459303 chr2R 7459370 7459376 13 104 8.5 2.0 5.2 2.1 114 chr2R 7459262 intergenic Inos -,CG11141 - chr2R 7459319 intergenic CG11141 -,Inos - chr2R 7459376 intergenic CG11141 - chr2R_13_7455001 chr2R_7455001 RAL-406 841 chr2R 7608388 7608402 chr2R 7613611 7613625 I-element 10 5221 19.5 0.0 9.8 0.9 5237 chr2R 7608388 intron CG1358 - chr2R 7611006 intron CG1358 - chr2R 7613625 intron CG1358 - chr2R_10_7610001 chr2R_7610001 RAL-406 842 chr2R 7608436 7608442 chr2R 7613608 7613664 I-element 4 5201 7.5 0.0 3.8 0.8 5228 chr2R 7608436 intron CG1358 - chr2R 7611050 intron CG1358 - chr2R 7613664 intron CG1358 - chr2R_4_7610001 chr2R_7610001 RAL-406 843 chr2R 7623805 7623844 chr2R 7624001 7624051 14 202 6.5 9.0 7.8 1.6 246 chr2R 7623805 intron CG43340 + chr2R 7623928 intron CG43340 + chr2R 7624051 intron CG43340 + chr2R_14_7620001 chr2R_7620001 RAL-406 844 chr2R 7714074 7714103 chr2R 7714154 7714158 13 88 11.0 5.5 8.2 1.4 84 chr2R 7714074 exon CG1942 + chr2R 7714116 exon CG1942 + chr2R 7714158 3` UTR CG1942 + chr2R_13_7710001 chr2R_7710001 RAL-406 845 chr2R 7734570 7734588 chr2R 7734639 7734655 4 80 2.5 2.5 2.5 1.1 85 chr2R 7734570 intron CG18812 - chr2R 7734612 intron CG18812 - chr2R 7734655 intron CG18812 - chr2R_4_7730001 chr2R_7730001 RAL-406 846 chr2R 7737891 7737906 chr2R 7737989 7738005 7 99 11.0 13.0 12.0 0.5 114 chr2R 7737891 intergenic not near genes chr2R 7737948 intergenic not near genes chr2R 7738005 intergenic not near genes chr2R_7_7735001 chr2R_7735001 RAL-406 847 chr2R 7815656 7815669 chr2R 7822145 7822158 Burdock 9 6488 11.0 4.5 7.8 1.0 6502 chr2R 7815656 intergenic CG1882 + chr2R 7818907 intergenic not near genes chr2R 7822158 3` UTR cathD - chr2R_9_7815001 chr2R_7815001 RAL-406 848 chr2R 7815678 7815703 chr2R 7822144 7822163 Burdock 12 6482 6.5 4.5 5.5 1.8 6485 chr2R 7815678 intergenic CG1882 + chr2R 7818920 intergenic not near genes chr2R 7822163 3` UTR cathD - chr2R_12_7815001 chr2R_7815001 RAL-406 849 chr2R 7862213 7862251 chr2R 7867347 7867372 flea 11 5132 2.5 7.0 4.8 1.9 5159 chr2R 7862213 intron Dgk - chr2R 7864792 intron Dgk - chr2R 7867372 intron Dgk - chr2R_11_7860001 chr2R_7860001 RAL-406 850 chr2R 7869176 7869217 chr2R 7873982 7873986 Doc 5 4796 6.5 3.5 5.0 0.8 4810 chr2R 7869176 intron Dgk - chr2R 7871581 intron Dgk - chr2R 7873986 intron Dgk - chr2R_5_7870001 chr2R_7870001 RAL-406 851 chr2R 7915691 7915744 chr2R 7915803 7915856 25 109 6.0 8.0 7.0 3.1 165 chr2R 7915691 intron CG12159 - chr2R 7915774 intron CG12159 - chr2R 7915856 intron CG12159 - chr2R_25_7915001 chr2R_7915001 RAL-406 852 chr2R 7952134 7952167 chr2R 7952421 7952456 21 286 2.5 8.0 5.2 3.4 322 chr2R 7952134 intron CG14764 - chr2R 7952295 intron CG14764 - chr2R 7952456 intron CG14764 - chr2R_21_7950001 chr2R_7950001 RAL-406 853 chr2R 8026791 8026837 chr2R 8026887 8026933 22 96 4.0 7.5 5.8 3.2 142 chr2R 8026791 intergenic CR45267 + chr2R 8026862 intergenic CR45267 + chr2R 8026933 intergenic CR45267 + chr2R_22_8025001 chr2R_8025001 RAL-406 854 chr2R 8036004 8036022 chr2R 8036102 8036119 7 96 4.5 7.0 5.8 1.0 115 chr2R 8036004 intron Optix + chr2R 8036062 intron Optix + chr2R 8036119 intron Optix + chr2R_7_8035001 chr2R_8035001 RAL-406 855 chr2R 8036023 8036055 chr2R 8036100 8036137 11 82 5.0 6.5 5.8 1.6 114 chr2R 8036023 intron Optix + chr2R 8036080 intron Optix + chr2R 8036137 intron Optix + chr2R_11_8035001 chr2R_8035001 RAL-406 856 chr2R 8067044 8067096 chr2R 8067148 8067151 19 99 5.0 8.0 6.5 2.5 107 chr2R 8067044 intron CG17977 - chr2R 8067098 intron CG17977 - chr2R 8067151 exon CG17977 - chr2R_19_8065001 chr2R_8065001 RAL-406 857 chr2R 8089241 8089284 chr2R 8089339 8089390 16 105 5.5 6.5 6.0 2.3 149 chr2R 8089241 3` UTR sut2 + chr2R 8089316 intergenic sut2 +,sut3 + chr2R 8089390 intergenic sut3 +,sut2 + chr2R_16_8085001 chr2R_8085001 RAL-406 858 chr2R 8105924 8105937 chr2R 8106034 8106047 6 111 2.0 5.0 3.5 1.3 123 chr2R 8105924 5` UTR Cul4 - chr2R 8105986 intron Cul4 - chr2R 8106047 5` UTR Cul4 - chr2R_6_8105001 chr2R_8105001 RAL-406 859 chr2R 8105942 8105962 chr2R 8106028 8106073 7 107 0.5 5.0 2.8 1.8 131 chr2R 8105942 intron Cul4 - chr2R 8106008 intron Cul4 - chr2R 8106073 5` UTR Cul4 - chr2R_7_8105001 chr2R_8105001 RAL-406 860 chr2R 8155563 8155613 chr2R 8155672 8155692 11 102 2.5 2.0 2.2 3.4 129 chr2R 8155563 intron,intron Lpin -,kermit - chr2R 8155628 intron,intron Lpin -,kermit - chr2R 8155692 intron,intron Lpin -,kermit - chr2R_11_8155001 chr2R_8155001 RAL-406 861 chr2R 8160923 8160948 chr2R 8161024 8161038 1360 4 103 1.5 7.0 4.2 0.8 115 chr2R 8160923 exon CG8708 - chr2R 8160980 intron CG8708 - chr2R 8161038 intron CG8708 - chr2R_4_8160001 chr2R_8160001 RAL-406 862 chr2R 8209038 8209081 chr2R 8209141 8209144 6 93 5.5 0.5 3.0 1.5 106 chr2R 8209038 intron LRP1 + chr2R 8209091 intron LRP1 + chr2R 8209144 intron LRP1 + chr2R_6_8205001 chr2R_8205001 RAL-406 863 chr2R 8218508 8218520 chr2R 8218631 8218643 8 122 13.0 19.5 16.2 0.5 135 chr2R 8218508 intron LRP1 + chr2R 8218576 intron LRP1 + chr2R 8218643 intron LRP1 + chr2R_8_8215001 chr2R_8215001 RAL-406 864 chr2R 8248598 8248625 chr2R 8248697 8248704 7 95 13.5 0.0 6.8 0.9 106 chr2R 8248598 intergenic CG44439 - chr2R 8248651 intergenic CG44439 - chr2R 8248704 intergenic CG44439 - chr2R_7_8245001 chr2R_8245001 RAL-406 865 chr2R 8297416 8297452 chr2R 8297515 8297551 20 97 4.5 6.0 5.2 3.2 135 chr2R 8297416 intergenic not near genes chr2R 8297484 intergenic not near genes chr2R 8297551 intergenic not near genes chr2R_20_8295001 chr2R_8295001 RAL-406 866 chr2R 8330845 8330890 chr2R 8331351 8331396 roo 21 503 3.5 7.5 5.5 3.2 551 chr2R 8330845 intron pdm3 + chr2R 8331120 intron pdm3 + chr2R 8331396 intron pdm3 + chr2R_21_8330001 chr2R_8330001 RAL-406 867 chr2R 8348725 8348760 chr2R 8348822 8348837 4 96 2.0 0.0 1.0 2.0 112 chr2R 8348725 intron pdm3 + chr2R 8348781 intron pdm3 + chr2R 8348837 intron pdm3 + chr2R_4_8345001 chr2R_8345001 RAL-406 868 chr2R 8370095 8370144 chr2R 8370217 8370267 14 121 4.5 4.5 4.5 2.5 172 chr2R 8370095 intron pdm3 + chr2R 8370181 intron pdm3 + chr2R 8370267 intron pdm3 + chr2R_14_8370001 chr2R_8370001 RAL-406 869 chr2R 8398215 8398239 chr2R 8402996 8403040 Doc 4 4794 4.0 3.0 3.5 0.9 4825 chr2R 8398215 intron CG2121 - chr2R 8400628 intron CG2121 - chr2R 8403040 intron CG2121 - chr2R_4_8400001 chr2R_8400001 RAL-406 870 chr2R 8452024 8452064 chr2R 8452127 8452151 7 93 2.5 10.5 6.5 0.9 127 chr2R 8452024 intergenic Mal-A1 - chr2R 8452088 intergenic Mal-A1 - chr2R 8452151 intergenic Mal-A1 - chr2R_7_8450001 chr2R_8450001 RAL-406 871 chr2R 8483946 8483991 chr2R 8484041 8484051 14 89 4.5 6.0 5.2 2.3 105 chr2R 8483946 intron mtt - chr2R 8483998 intron mtt - chr2R 8484051 intron mtt - chr2R_14_8480001 chr2R_8480001 RAL-406 872 chr2R 8489733 8489758 chr2R 8489817 8489817 8 88 4.5 9.0 6.8 1.0 84 chr2R 8489733 intron mtt - chr2R 8489775 intron mtt - chr2R 8489817 intron mtt - chr2R_8_8485001 chr2R_8485001 RAL-406 873 chr2R 8517693 8517739 chr2R 8517815 8517861 13 121 3.5 4.5 4.0 2.6 168 chr2R 8517693 intron mtt - chr2R 8517777 intron mtt - chr2R 8517861 intron mtt - chr2R_13_8515001 chr2R_8515001 RAL-406 874 chr2R 8524945 8524970 chr2R 8525086 8525127 8 147 6.5 7.5 7.0 1.0 182 chr2R 8524945 intron mtt - chr2R 8525036 intron mtt - chr2R 8525127 intron mtt - chr2R_8_8525001 chr2R_8525001 RAL-406 875 chr2R 8554239 8554283 chr2R 8554348 8554392 4 107 9.0 4.5 6.8 0.5 153 chr2R 8554239 intergenic not near genes chr2R 8554316 intergenic not near genes chr2R 8554392 intergenic not near genes chr2R_4_8550001 chr2R_8550001 RAL-406 876 chr2R 8566047 8566067 chr2R 8567011 8567033 1360 10 964 4.5 6.0 5.2 1.6 986 chr2R 8566047 5` UTR Cyp6a14 - chr2R 8566540 5` UTR Cyp6a14 - chr2R 8567033 5` UTR Cyp6a14 - chr2R_10_8565001 chr2R_8565001 RAL-406 877 chr2R 8595942 8595992 chr2R 8596040 8596090 22 97 5.5 7.5 6.5 2.9 148 chr2R 8595942 intergenic not near genes chr2R 8596016 intergenic not near genes chr2R 8596090 intergenic not near genes chr2R_22_8595001 chr2R_8595001 RAL-406 878 chr2R 8612559 8612608 chr2R 8612656 8612705 21 96 6.5 10.0 8.2 2.3 146 chr2R 8612559 intron CG8642 - chr2R 8612632 intron CG8642 - chr2R 8612705 intron CG8642 - chr2R_21_8610001 chr2R_8610001 RAL-406 879 chr2R 8635908 8635932 chr2R 8636006 8636030 6 96 0.0 6.0 3.0 1.5 122 chr2R 8635908 intergenic not near genes chr2R 8635969 intergenic not near genes chr2R 8636030 intergenic not near genes chr2R_6_8635001 chr2R_8635001 RAL-406 880 chr2R 8668409 8668456 chr2R 8668517 8668564 24 106 9.0 5.0 7.0 3.0 155 chr2R 8668409 intron Acsl + chr2R 8668486 intron Acsl + chr2R 8668564 intron Acsl + chr2R_24_8665001 chr2R_8665001 RAL-406 881 chr2R 8722742 8722791 chr2R 8723003 8723052 pogo 17 251 6.0 2.0 4.0 3.4 310 chr2R 8722742 intron CG14767 - chr2R 8722897 intron CG14767 - chr2R 8723052 intron CG14767 - chr2R_17_8720001 chr2R_8720001 RAL-406 882 chr2R 8777932 8777940 chr2R 8784151 8784164 diver 6 6222 7.5 14.0 10.8 0.5 6232 chr2R 8777932 intergenic not near genes chr2R 8781048 intergenic not near genes chr2R 8784164 intergenic not near genes chr2R_6_8780001 chr2R_8780001 RAL-406 883 chr2R 8827745 8827782 chr2R 8827837 8827878 9 95 9.0 6.0 7.5 1.1 133 chr2R 8827745 intron,3` UTR sns +,CG30350 + chr2R 8827812 intron sns + chr2R 8827878 intron sns + chr2R_9_8825001 chr2R_8825001 RAL-406 884 chr2R 8958400 8958432 chr2R 8958508 8958545 10 109 4.0 10.0 7.0 1.2 145 chr2R 8958400 intron babo + chr2R 8958472 intron babo + chr2R 8958545 intron babo + chr2R_10_8955001 chr2R_8955001 RAL-406 885 chr2R 8967665 8967705 chr2R 8967802 8967842 5 135 6.5 0.0 3.2 1.2 177 chr2R 8967665 intron CG8216 - chr2R 8967754 intron CG8216 - chr2R 8967842 intron CG8216 - chr2R_5_8965001 chr2R_8965001 RAL-406 886 chr2R 8983667 8983696 chr2R 8983743 8983787 17 91 5.5 5.5 5.5 2.6 120 chr2R 8983667 intron CG8213 - chr2R 8983727 intron CG8213 - chr2R 8983787 intron CG8213 - chr2R_17_8980001 chr2R_8980001 RAL-406 887 chr2R 9034562 9034593 chr2R 9034727 9034758 4 156 7.5 10.0 8.8 0.4 196 chr2R 9034562 intergenic not near genes chr2R 9034660 intergenic not near genes chr2R 9034758 intergenic not near genes chr2R_4_9030001 chr2R_9030001 RAL-406 888 chr2R 9034595 9034606 chr2R 9034718 9034771 7 151 5.5 8.5 7.0 0.9 176 chr2R 9034595 intergenic not near genes chr2R 9034683 intergenic not near genes chr2R 9034771 intergenic not near genes chr2R_7_9030001 chr2R_9030001 RAL-406 889 chr2R 9047403 9047438 chr2R 9047518 9047553 22 114 7.5 5.5 6.5 2.9 150 chr2R 9047403 intron CG13743 - chr2R 9047478 intron CG13743 - chr2R 9047553 intron CG13743 - chr2R_22_9045001 chr2R_9045001 RAL-406 890 chr2R 9076117 9076164 chr2R 9076213 9076260 14 93 3.5 9.5 6.5 1.9 143 chr2R 9076117 intron ana + chr2R 9076188 intron ana + chr2R 9076260 intron ana + chr2R_14_9075001 chr2R_9075001 RAL-406 891 chr2R 9078460 9078495 chr2R 9078558 9078592 12 98 7.5 5.5 6.5 1.6 132 chr2R 9078460 intergenic CG8083 + chr2R 9078526 intergenic CG8083 + chr2R 9078592 intergenic CG8083 + chr2R_12_9075001 chr2R_9075001 RAL-406 892 chr2R 9151280 9151330 chr2R 9157770 9157820 Burdock 32 6488 3.0 7.5 5.2 5.2 6540 chr2R 9151280 exon CG30345 + chr2R 9154550 intergenic not near genes chr2R 9157820 intergenic CG8008 - chr2R_32_9150001 chr2R_9150001 RAL-406 893 chr2R 9236495 9236529 chr2R 9237288 9237322 11 790 6.0 4.5 5.2 1.8 827 chr2R 9236495 intron hig - chr2R 9236908 intron hig - chr2R 9237322 intron hig - chr2R_11_9235001 chr2R_9235001 RAL-406 894 chr2R 9236531 9236543 chr2R 9237283 9237336 9 781 3.5 2.5 3.0 2.2 805 chr2R 9236531 intron hig - chr2R 9236934 intron hig - chr2R 9237336 intron hig - chr2R_9_9235001 chr2R_9235001 RAL-406 895 chr2R 9480057 9480103 chr2R 9490608 9490654 roo 17 10549 10.5 10.0 10.2 1.5 10597 chr2R 9480057 intergenic not near genes chr2R 9485356 intergenic not near genes chr2R 9490654 intergenic not near genes chr2R_17_9485001 chr2R_9485001 RAL-406 896 chr2R 9541609 9541653 chr2R 9541704 9541740 22 94 1.0 3.0 2.0 7.3 131 chr2R 9541609 intergenic brp +,CG1888 - chr2R 9541674 intergenic brp +,CG1888 - chr2R 9541740 intergenic brp +,CG1888 - chr2R_22_9540001 chr2R_9540001 RAL-406 897 chr2R 9584441 9584482 chr2R 9584540 9584565 6 90 4.5 5.5 5.0 1.0 124 chr2R 9584441 intron CG1868 - chr2R 9584503 5` UTR CG1868 - chr2R 9584565 intergenic CG1868 -,Updo + chr2R_6_9580001 chr2R_9580001 RAL-406 898 chr2R 9617759 9617809 chr2R 9618037 9618087 13 272 3.0 0.0 1.5 5.2 328 chr2R 9617759 intron Mmp2 - chr2R 9617923 intron Mmp2 - chr2R 9618087 intron Mmp2 - chr2R_13_9615001 chr2R_9615001 RAL-406 899 chr2R 9649730 9649743 chr2R 9649936 9649981 5 225 1.5 3.0 2.2 1.6 251 chr2R 9649730 intron Mmp2 - chr2R 9649856 intron Mmp2 - chr2R 9649981 intron Mmp2 - chr2R_5_9645001 chr2R_9645001 RAL-406 900 chr2R 9669126 9669166 chr2R 9669236 9669278 11 113 5.5 4.5 5.0 1.8 152 chr2R 9669126 intron Mmp2 - chr2R 9669202 intron Mmp2 - chr2R 9669278 intron Mmp2 - chr2R_11_9665001 chr2R_9665001 RAL-406 901 chr2R 9726599 9726643 chr2R 9734170 9734214 17.6 23 7568 5.0 7.5 6.2 3.2 7615 chr2R 9726599 intron sqa - chr2R 9730406 intron sqa - chr2R 9734214 intron sqa - chr2R_23_9730001 chr2R_9730001 RAL-406 902 chr2R 9770059 9770095 chr2R 9770163 9770209 10 112 0.0 5.0 2.5 2.9 150 chr2R 9770059 intron CG1688 - chr2R 9770134 intron CG1688 - chr2R 9770209 intron CG1688 - chr2R_10_9770001 chr2R_9770001 RAL-406 903 chr2R 9945418 9945466 chr2R 9945634 9945665 BS 6 210 4.5 1.5 3.0 1.5 247 chr2R 9945418 intron Mef2 - chr2R 9945542 intron Mef2 - chr2R 9945665 intron Mef2 - chr2R_6_9945001 chr2R_9945001 RAL-406 904 chr2R 9998083 9998091 chr2R 9998197 9998201 5 113 4.0 8.0 6.0 0.7 118 chr2R 9998083 intron Pka-R2 - chr2R 9998142 intron Pka-R2 - chr2R 9998201 intron Pka-R2 - chr2R_5_9995001 chr2R_9995001 RAL-406 905 chr2R 10005533 10005582 chr2R 10005661 10005710 24 127 5.5 6.0 5.8 3.5 177 chr2R 10005533 intron Pka-R2 - chr2R 10005622 intron Pka-R2 - chr2R 10005710 intron Pka-R2 - chr2R_24_10005001 chr2R_10005001 RAL-406 906 chr2R 10005848 10005880 chr2R 10007013 10007046 1360 10 1169 5.5 2.0 3.8 2.1 1198 chr2R 10005848 intron Pka-R2 - chr2R 10006447 intron Pka-R2 - chr2R 10007046 intron Pka-R2 - chr2R_10_10005001 chr2R_10005001 RAL-406 907 chr2R 10047805 10047834 chr2R 10047908 10047937 15 102 11.0 11.5 11.2 1.2 132 chr2R 10047805 intron oys - chr2R 10047871 intron oys - chr2R 10047937 intron oys - chr2R_15_10045001 chr2R_10045001 RAL-406 908 chr2R 10122732 10122749 chr2R 10122950 10122959 9 224 10.5 1.0 5.8 1.3 227 chr2R 10122732 intergenic Ccs - chr2R 10122846 intergenic Ccs - chr2R 10122959 intergenic Ccs - chr2R_9_10120001 chr2R_10120001 RAL-406 909 chr2R 10132169 10132216 chr2R 10132269 10132316 14 97 4.0 4.0 4.0 2.8 147 chr2R 10132169 intron gem + chr2R 10132242 intron gem + chr2R 10132316 exon gem + chr2R_14_10130001 chr2R_10130001 RAL-406 910 chr2R 10147630 10147663 chr2R 10147733 10147766 13 98 4.0 8.5 6.2 1.8 136 chr2R 10147630 intron KCNQ - chr2R 10147698 intron KCNQ - chr2R 10147766 intron KCNQ - chr2R_13_10145001 chr2R_10145001 RAL-406 911 chr2R 10155837 10155885 chr2R 10155951 10155999 25 112 6.0 5.0 5.5 3.8 162 chr2R 10155837 intron KCNQ - chr2R 10155918 intron,3` UTR KCNQ -,mlt - chr2R 10155999 intron,3` UTR KCNQ -,mlt - chr2R_25_10155001 chr2R_10155001 RAL-406 912 chr2R 10176863 10176875 chr2R 10186050 10186062 roo 9 9187 11.5 11.5 11.5 0.7 9199 chr2R 10176863 intron KCNQ - chr2R 10181462 intron KCNQ - chr2R 10186062 intron KCNQ - chr2R_9_10180001 chr2R_10180001 RAL-406 913 chr2R 10176880 10176912 chr2R 10186047 10186099 roo 13 9180 4.5 11.0 7.8 1.5 9219 chr2R 10176880 intron KCNQ - chr2R 10181490 intron KCNQ - chr2R 10186099 intron KCNQ - chr2R_13_10180001 chr2R_10180001 RAL-406 914 chr2R 10198199 10198249 chr2R 10198302 10198347 16 101 5.0 0.5 2.8 4.2 148 chr2R 10198199 intron CG34221 - chr2R 10198273 intron CG34221 - chr2R 10198347 intron CG34221 - chr2R_16_10195001 chr2R_10195001 RAL-406 915 chr2R 10203622 10203657 chr2R 10203727 10203762 6 105 9.0 5.0 7.0 0.8 140 chr2R 10203622 intergenic not near genes chr2R 10203692 intergenic not near genes chr2R 10203762 intergenic not near genes chr2R_6_10200001 chr2R_10200001 RAL-406 916 chr2R 10216206 10216216 chr2R 10216288 10216295 4 84 1.0 6.0 3.5 0.9 89 chr2R 10216206 intron,intron CG12912 -,Hr46 - chr2R 10216250 intron,intron CG12912 -,Hr46 - chr2R 10216295 intron,intron CG12912 -,Hr46 - chr2R_4_10215001 chr2R_10215001 RAL-406 917 chr2R 10257143 10257162 chr2R 10257252 10257273 4 110 13.0 2.0 7.5 0.5 130 chr2R 10257143 intron CG12911 + chr2R 10257208 intron CG12911 + chr2R 10257273 intron CG12911 + chr2R_4_10255001 chr2R_10255001 RAL-406 918 chr2R 10257170 10257191 chr2R 10257251 10257302 13 105 7.0 2.0 4.5 2.4 132 chr2R 10257170 intron CG12911 + chr2R 10257236 intron CG12911 + chr2R 10257302 intron CG12911 + chr2R_13_10255001 chr2R_10255001 RAL-406 919 chr2R 10274802 10274828 chr2R 10274898 10274923 12 94 7.0 1.0 4.0 2.4 121 chr2R 10274802 intron CAP + chr2R 10274862 intron CAP + chr2R 10274923 intron CAP + chr2R_12_10270001 chr2R_10270001 RAL-406 920 chr2R 10313314 10313332 chr2R 10313422 10313433 5 105 2.0 10.0 6.0 0.7 119 chr2R 10313314 intergenic not near genes chr2R 10313374 intergenic not near genes chr2R 10313433 intergenic Ndg + chr2R_5_10310001 chr2R_10310001 RAL-406 921 chr2R 10313333 10313350 chr2R 10313421 10313458 9 105 2.0 10.0 6.0 1.3 125 chr2R 10313333 intergenic not near genes chr2R 10313396 intergenic Ndg + chr2R 10313458 intergenic Ndg + chr2R_9_10310001 chr2R_10310001 RAL-406 922 chr2R 10370495 10370518 chr2R 10370652 10370681 21 162 9.5 6.0 7.8 2.4 186 chr2R 10370495 intron CG42732 - chr2R 10370588 intron CG42732 - chr2R 10370681 intron CG42732 - chr2R_21_10370001 chr2R_10370001 RAL-406 923 chr2R 10411783 10411836 chr2R 10411885 10411938 15 100 5.5 8.0 6.8 1.9 155 chr2R 10411783 intron CG42732 - chr2R 10411860 intron CG42732 - chr2R 10411938 intron CG42732 - chr2R_15_10410001 chr2R_10410001 RAL-406 924 chr2R 10429007 10429022 chr2R 10429103 10429119 4 96 8.5 5.0 6.8 0.5 112 chr2R 10429007 intergenic not near genes chr2R 10429063 intergenic not near genes chr2R 10429119 intergenic not near genes chr2R_4_10425001 chr2R_10425001 RAL-406 925 chr2R 10429034 10429049 chr2R 10429096 10429136 7 76 6.0 3.5 4.8 1.2 102 chr2R 10429034 intergenic not near genes chr2R 10429085 intergenic not near genes chr2R 10429136 intergenic not near genes chr2R_7_10425001 chr2R_10425001 RAL-406 926 chr2R 10454090 10454126 chr2R 10454172 10454223 18 90 6.5 7.5 7.0 2.2 133 chr2R 10454090 intron,intron Galphao +,Cyp49a1 - chr2R 10454156 intron,intron Galphao +,Cyp49a1 - chr2R 10454223 intron,intron Galphao +,Cyp49a1 - chr2R_18_10450001 chr2R_10450001 RAL-406 927 chr2R 10562978 10563232 chr2R 10563076 10563350 7 107 0.0 0.0 0.0 7.0 372 chr2R 10562978 intron psq + chr2R 10563164 intron psq + chr2R 10563350 intron psq + chr2R_7_10560001 chr2R_10560001 RAL-406 928 chr2R 10563903 10563925 chr2R 10564114 10564136 9 210 0.0 4.5 2.2 2.8 233 chr2R 10563903 intron psq + chr2R 10564020 intron psq + chr2R 10564136 intron psq + chr2R_9_10560001 chr2R_10560001 RAL-406 929 chr2R 10574605 10574638 chr2R 10574707 10574729 7 99 12.0 11.5 11.8 0.5 124 chr2R 10574605 intron psq + chr2R 10574667 intron psq + chr2R 10574729 intron psq + chr2R_7_10570001 chr2R_10570001 RAL-406 930 chr2R 10644047 10644085 chr2R 10644145 10644183 15 96 6.0 0.0 3.0 3.8 136 chr2R 10644047 intron Git - chr2R 10644115 intron Git - chr2R 10644183 intron Git - chr2R_15_10640001 chr2R_10640001 RAL-406 931 chr2R 10672724 10672831 chr2R 10672831 10672976 4 134 0.0 0.0 0.0 4.0 252 chr2R 10672724 intergenic not near genes chr2R 10672850 intergenic stan + chr2R 10672976 intergenic stan + chr2R_4_10670001 chr2R_10670001 RAL-406 932 chr2R 10758359 10758414 chr2R 10758493 10758548 18 129 3.0 5.0 4.0 3.6 189 chr2R 10758359 intron CG33144 - chr2R 10758454 intron CG33144 - chr2R 10758548 intron CG33144 - chr2R_18_10755001 chr2R_10755001 RAL-406 933 chr2R 10808576 10808629 chr2R 10808683 10808728 18 103 2.0 5.0 3.5 4.0 152 chr2R 10808576 intron wde - chr2R 10808652 intron wde - chr2R 10808728 intron wde - chr2R_18_10805001 chr2R_10805001 RAL-406 934 chr2R 10827314 10827362 chr2R 10827422 10827468 10 102 1.5 2.5 2.0 3.3 154 chr2R 10827314 exon CG12325 + chr2R 10827391 3` UTR CG12325 + chr2R 10827468 3` UTR,3` UTR CG12325 +,CG12344 - chr2R_10_10825001 chr2R_10825001 RAL-406 935 chr2R 10922763 10922791 chr2R 10922858 10922897 8 101 0.0 3.5 1.8 2.9 134 chr2R 10922763 intergenic not near genes chr2R 10922830 intergenic not near genes chr2R 10922897 intergenic not near genes chr2R_8_10920001 chr2R_10920001 RAL-406 936 chr2R 10947074 10947123 chr2R 10947180 10947221 7 103 3.5 0.0 1.8 2.5 147 chr2R 10947074 5` UTR CR45228 + chr2R 10947148 intergenic CR45228 + chr2R 10947221 intergenic CR45228 + chr2R_7_10945001 chr2R_10945001 RAL-406 937 chr2R 10948022 10948060 chr2R 10955583 10955593 17.6 5 7550 1.5 3.0 2.2 1.6 7571 chr2R 10948022 intergenic not near genes chr2R 10951808 intergenic not near genes chr2R 10955593 intergenic not near genes chr2R_5_10950001 chr2R_10950001 RAL-406 938 chr2R 10959074 10959103 chr2R 10959173 10959202 14 94 6.0 3.0 4.5 2.5 128 chr2R 10959074 intergenic not near genes chr2R 10959138 intergenic not near genes chr2R 10959202 intergenic not near genes chr2R_14_10955001 chr2R_10955001 RAL-406 939 chr2R 10979656 10979682 chr2R 10980138 10980169 297 5 485 3.0 8.0 5.5 0.8 513 chr2R 10979656 intergenic not near genes chr2R 10979912 intergenic not near genes chr2R 10980169 intergenic not near genes chr2R_5_10975001 chr2R_10975001 RAL-406 940 chr2R 11009798 11009809 chr2R 11018992 11018996 roo 4 9192 11.0 5.5 8.2 0.4 9198 chr2R 11009798 intron luna - chr2R 11014397 intron luna - chr2R 11018996 intron luna - chr2R_4_11010001 chr2R_11010001 RAL-406 941 chr2R 11009816 11009847 chr2R 11018989 11019010 roo 8 9180 6.5 5.5 6.0 1.1 9194 chr2R 11009816 intron luna - chr2R 11014413 intron luna - chr2R 11019010 intron luna - chr2R_8_11010001 chr2R_11010001 RAL-406 942 chr2R 11129800 11129845 chr2R 11129899 11129932 10 90 5.0 3.0 4.0 2.0 132 chr2R 11129800 intergenic not near genes chr2R 11129866 intergenic not near genes chr2R 11129932 intergenic not near genes chr2R_10_11125001 chr2R_11125001 RAL-406 943 chr2R 11154204 11154233 chr2R 11154344 11154373 6 140 0.0 10.0 5.0 1.0 169 chr2R 11154204 intron CG13229 - chr2R 11154288 intron CG13229 - chr2R 11154373 intron CG13229 - chr2R_6_11150001 chr2R_11150001 RAL-406 944 chr2R 11158845 11158862 chr2R 11159034 11159050 8 189 10.0 6.0 8.0 0.9 205 chr2R 11158845 intron CG13229 - chr2R 11158948 intron CG13229 - chr2R 11159050 intron CG13229 - chr2R_8_11155001 chr2R_11155001 RAL-406 945 chr2R 11158866 11158892 chr2R 11159033 11159081 13 182 4.0 5.5 4.8 2.2 215 chr2R 11158866 intron CG13229 - chr2R 11158974 intron CG13229 - chr2R 11159081 intron CG13229 - chr2R_13_11155001 chr2R_11155001 RAL-406 946 chr2R 11207795 11207845 chr2R 11208007 11208057 BS 9 204 5.0 8.0 6.5 1.2 262 chr2R 11207795 intron shn + chr2R 11207926 intron shn + chr2R 11208057 intron shn + chr2R_9_11205001 chr2R_11205001 RAL-406 947 chr2R 11224049 11224253 chr2R 11224229 11224451 5 190 8.0 17.0 12.5 0.4 402 chr2R 11224049 intron CG7737 + chr2R 11224250 intron CG7737 + chr2R 11224451 intron CG7737 + chr2R_5_11220001 chr2R_11220001 RAL-406 948 chr2R 11265720 11265748 chr2R 11265806 11265821 4 80 5.0 0.0 2.5 1.1 101 chr2R 11265720 exon Cpr47Ee + chr2R 11265770 intron Cpr47Ee + chr2R 11265821 intron Cpr47Ee + chr2R_4_11265001 chr2R_11265001 RAL-406 949 chr2R 11292981 11293001 chr2R 11293047 11293118 14 78 2.0 1.5 1.8 5.0 137 chr2R 11292981 exon,3` UTR dare -,CG30033 + chr2R 11293050 5` UTR,3` UTR dare -,CG30033 + chr2R 11293118 5` UTR,3` UTR dare -,CG30033 + chr2R_14_11290001 chr2R_11290001 RAL-406 950 chr2R 11297619 11297636 chr2R 11301963 11301980 flea 13 4344 4.0 0.5 2.2 4.1 4361 chr2R 11297619 intergenic CG42336 - chr2R 11299800 intergenic not near genes chr2R 11301980 5` UTR CG7741 + chr2R_13_11295001 chr2R_11295001 RAL-406 951 chr2R 11317989 11318012 chr2R 11318107 11318115 5 107 5.0 11.5 8.2 0.5 126 chr2R 11317989 intron nompA - chr2R 11318052 intron nompA - chr2R 11318115 intron nompA - chr2R_5_11315001 chr2R_11315001 RAL-406 952 chr2R 11344145 11344158 chr2R 11344261 11344269 4 112 0.0 5.5 2.8 1.1 124 chr2R 11344145 intergenic alphaTry - chr2R 11344207 intergenic alphaTry - chr2R 11344269 3` UTR alphaTry - chr2R_4_11340001 chr2R_11340001 RAL-406 953 chr2R 11368009 11368040 chr2R 11368105 11368136 6 94 5.5 2.5 4.0 1.2 127 chr2R 11368009 intron CG13204 + chr2R 11368072 intron CG13204 + chr2R 11368136 intron CG13204 + chr2R_6_11365001 chr2R_11365001 RAL-406 954 chr2R 11415510 11415542 chr2R 11418669 11418711 opus 4 3166 4.0 7.0 5.5 0.6 3201 chr2R 11415510 intron Drip - chr2R 11417110 intron Drip - chr2R 11418711 intron Drip - chr2R_4_11415001 chr2R_11415001 RAL-406 955 chr2R 11415545 11415549 chr2R 11418668 11418718 opus 5 3141 3.5 7.0 5.2 0.8 3173 chr2R 11415545 intron Drip - chr2R 11417132 intron Drip - chr2R 11418718 intron Drip - chr2R_5_11415001 chr2R_11415001 RAL-406 956 chr2R 11415550 11415551 chr2R 11418665 11418686 opus 4 3128 3.5 7.0 5.2 0.6 3136 chr2R 11415550 intron Drip - chr2R 11417118 intron Drip - chr2R 11418686 intron Drip - chr2R_4_11415001 chr2R_11415001 RAL-406 957 chr2R 11419853 11419896 chr2R 11419992 11420015 13 143 1.5 4.5 3.0 3.2 162 chr2R 11419853 intron Drip - chr2R 11419934 intron Drip - chr2R 11420015 intron Drip - chr2R_13_11415001 chr2R_11415001 RAL-406 958 chr2R 11472630 11472678 chr2R 11473847 11473885 pogo 17 1211 8.0 7.5 7.8 1.9 1255 chr2R 11472630 intergenic not near genes chr2R 11473258 intergenic not near genes chr2R 11473885 intergenic not near genes chr2R_17_11470001 chr2R_11470001 RAL-406 959 chr2R 11480790 11480832 chr2R 11480893 11480935 9 95 1.0 1.0 1.0 4.5 145 chr2R 11480790 intron inv + chr2R 11480862 intron inv + chr2R 11480935 intron inv + chr2R_9_11480001 chr2R_11480001 RAL-406 960 chr2R 11555383 11555424 chr2R 11555732 11555779 8 354 0.5 1.0 0.8 4.4 396 chr2R 11555383 intergenic not near genes chr2R 11555581 intergenic not near genes chr2R 11555779 intergenic not near genes chr2R_8_11555001 chr2R_11555001 RAL-406 961 chr2R 11614603 11614797 chr2R 11614711 11614905 28 107 8.5 10.0 9.2 2.7 302 chr2R 11614603 intron tou - chr2R 11614754 intron tou - chr2R 11614905 intron tou - chr2R_28_11610001 chr2R_11610001 RAL-406 962 chr2R 11631380 11631413 chr2R 11631480 11631503 12 98 0.0 6.0 3.0 3.0 123 chr2R 11631380 intron CG9005 - chr2R 11631442 intron CG9005 - chr2R 11631503 intron CG9005 - chr2R_12_11630001 chr2R_11630001 RAL-406 963 chr2R 11672682 11672708 chr2R 11676129 11676168 4 3452 24.5 9.5 17.0 0.2 3486 chr2R 11672682 intron,intron Roc2 -,Tret1-1 + chr2R 11674425 intron,exon Roc2 -,Tret1-1 + chr2R 11676168 intron,intron Roc2 -,Tret1-2 + chr2R_4_11670001 chr2R_11670001 RAL-406 964 chr2R 11677862 11677897 chr2R 11677954 11677995 10 92 3.0 8.5 5.8 1.5 133 chr2R 11677862 intron,exon Roc2 -,Tret1-2 + chr2R 11677928 intron,3` UTR Roc2 -,Tret1-2 + chr2R 11677995 intron,3` UTR Roc2 -,Tret1-2 + chr2R_10_11675001 chr2R_11675001 RAL-406 965 chr2R 11724137 11724189 chr2R 11724240 11724287 14 96 4.0 4.5 4.2 2.7 150 chr2R 11724137 intron pyr + chr2R 11724212 intron pyr + chr2R 11724287 intron pyr + chr2R_14_11720001 chr2R_11720001 RAL-406 966 chr2R 11863867 11863883 chr2R 11863974 11863984 5 106 3.0 10.5 6.8 0.6 117 chr2R 11863867 intergenic CG42531 + chr2R 11863926 intergenic CG42531 + chr2R 11863984 intergenic CG42531 + chr2R_5_11860001 chr2R_11860001 RAL-406 967 chr2R 11928675 11928711 chr2R 11928768 11928809 7 93 0.0 0.5 0.2 5.8 134 chr2R 11928675 intergenic not near genes chr2R 11928742 intergenic not near genes chr2R 11928809 intergenic CR44312 - chr2R_7_11925001 chr2R_11925001 RAL-406 968 chr2R 11955359 11955375 chr2R 11955458 11955474 10 99 5.5 0.5 3.0 2.5 115 chr2R 11955359 intron CG13188 + chr2R 11955416 intron CG13188 + chr2R 11955474 intron CG13188 + chr2R_10_11955001 chr2R_11955001 RAL-406 969 chr2R 12124818 12124858 chr2R 12124912 12124962 17 99 4.0 3.0 3.5 3.8 144 chr2R 12124818 intergenic not near genes chr2R 12124890 intergenic not near genes chr2R 12124962 intergenic not near genes chr2R_17_12120001 chr2R_12120001 RAL-406 970 chr2R 12185981 12186037 chr2R 12186096 12186152 45 109 9.0 8.5 8.8 4.6 171 chr2R 12185981 intron Cyp6g1 + chr2R 12186066 intron Cyp6g1 + chr2R 12186152 intron Cyp6g1 + chr2R_45_12185001 chr2R_12185001 RAL-406 971 chr2R 12185222 12185232 chr2R 12188127 12188141 5 2906 33.0 121.5 77.2 0.1 2919 chr2R 12185222 3` UTR,exon CG13175 +,CG33964 + chr2R 12186682 exon Cyp6g1 + chr2R 12188141 3` UTR Cyp6g1 + chr2R_5_12185001 chr2R_12185001 RAL-406 972 chr2R 12187476 12187494 chr2R 12190072 12190121 22 2610 40.0 54.5 47.2 0.5 2645 chr2R 12187476 exon Cyp6g1 + chr2R 12188798 exon Cyp6g2 - chr2R 12190121 exon Cyp6g2 - chr2R_22_12185001 chr2R_12185001 RAL-406 973 chr2R 12217558 12217602 chr2R 12217657 12217703 12 86 2.0 5.0 3.5 2.7 145 chr2R 12217558 intergenic not near genes chr2R 12217630 intergenic not near genes chr2R 12217703 intergenic not near genes chr2R_12_12215001 chr2R_12215001 RAL-406 974 chr2R 12301855 12301908 chr2R 12301952 12302005 17 93 2.0 6.0 4.0 3.4 150 chr2R 12301855 intron CG8850 - chr2R 12301930 intron CG8850 - chr2R 12302005 intron CG8850 - chr2R_17_12300001 chr2R_12300001 RAL-406 975 chr2R 12363362 12363408 chr2R 12363814 12363854 21 449 4.0 5.5 4.8 3.6 492 chr2R 12363362 intergenic CG30043 + chr2R 12363608 intergenic CG30043 + chr2R 12363854 intergenic not near genes chr2R_21_12360001 chr2R_12360001 RAL-406 976 chr2R 12492079 12492117 chr2R 12492185 12492193 11 95 6.5 5.5 6.0 1.6 114 chr2R 12492079 intron fdl - chr2R 12492136 intron fdl - chr2R 12492193 intron fdl - chr2R_11_12490001 chr2R_12490001 RAL-406 977 chr2R 12565273 12565315 chr2R 12565378 12565420 12 104 6.5 0.0 3.2 2.9 147 chr2R 12565273 intergenic CG33775 - chr2R 12565346 intergenic CG33775 - chr2R 12565420 intergenic not near genes chr2R_12_12565001 chr2R_12565001 RAL-406 978 chr2R 12565546 12565593 chr2R 12565944 12565962 9 391 0.0 6.0 3.0 2.2 416 chr2R 12565546 intergenic not near genes chr2R 12565754 intergenic Cyp301a1 + chr2R 12565962 intergenic Cyp301a1 + chr2R_9_12565001 chr2R_12565001 RAL-406 979 chr2R 12625507 12625538 chr2R 12625605 12625636 8 96 3.5 6.0 4.8 1.4 129 chr2R 12625507 intergenic CG30054 +,CG17760 + chr2R 12625572 intergenic CG30054 +,CG17760 + chr2R 12625636 intergenic CG17760 +,CG30054 + chr2R_8_12625001 chr2R_12625001 RAL-406 980 chr2R 12707502 12707546 chr2R 12715888 12715932 roo 19 8385 3.0 6.0 4.5 3.5 8430 chr2R 12707502 intron CG42663 + chr2R 12711717 intron CG42663 + chr2R 12715932 intron CG42663 + chr2R_19_12710001 chr2R_12710001 RAL-406 981 chr2R 12733020 12733047 chr2R 12733118 12733123 16 95 4.0 5.0 4.5 2.9 103 chr2R 12733020 intron CG42663 + chr2R 12733072 intron CG42663 + chr2R 12733123 intron CG42663 + chr2R_16_12730001 chr2R_12730001 RAL-406 982 chr2R 12771159 12771187 chr2R 12771428 12771456 5 269 7.0 5.0 6.0 0.7 297 chr2R 12771159 intergenic not near genes chr2R 12771308 intergenic not near genes chr2R 12771456 intergenic not near genes chr2R_5_12770001 chr2R_12770001 RAL-406 983 chr2R 12777799 12777823 chr2R 12777928 12777936 8 127 0.0 7.0 3.5 1.8 137 chr2R 12777799 5` UTR CR45266 + chr2R 12777868 5` UTR CR45266 + chr2R 12777936 5` UTR CR45266 + chr2R_8_12775001 chr2R_12775001 RAL-406 984 chr2R 12819166 12819175 chr2R 12819285 12819315 6 136 0.0 0.5 0.2 5.0 149 chr2R 12819166 intergenic not near genes chr2R 12819240 intergenic not near genes chr2R 12819315 intergenic not near genes chr2R_6_12815001 chr2R_12815001 RAL-406 985 chr2R 12819435 12819478 chr2R 12824532 12824551 jockey 8 5094 5.5 2.5 4.0 1.6 5116 chr2R 12819435 intergenic not near genes chr2R 12821993 intergenic not near genes chr2R 12824551 intergenic not near genes chr2R_8_12820001 chr2R_12820001 RAL-406 986 chr2R 12836369 12836418 chr2R 12836476 12836484 14 101 8.0 5.0 6.5 1.9 115 chr2R 12836369 intergenic not near genes chr2R 12836426 intergenic not near genes chr2R 12836484 intergenic not near genes chr2R_14_12835001 chr2R_12835001 RAL-406 987 chr2R 12871228 12871247 chr2R 12871324 12871339 12 94 11.0 6.0 8.5 1.3 111 chr2R 12871228 3` UTR bic + chr2R 12871284 3` UTR bic + chr2R 12871339 3` UTR bic + chr2R_12_12870001 chr2R_12870001 RAL-406 988 chr2R 12871249 12871274 chr2R 12871318 12871329 4 69 6.5 5.0 5.8 0.6 80 chr2R 12871249 3` UTR bic + chr2R 12871289 3` UTR bic + chr2R 12871329 3` UTR bic + chr2R_4_12870001 chr2R_12870001 RAL-406 989 chr2R 12879213 12879264 chr2R 12879312 12879363 21 97 3.5 4.5 4.0 4.2 150 chr2R 12879213 intron,5` UTR Aats-asp +,Nmda1 - chr2R 12879288 intron,intron Aats-asp +,Nmda1 - chr2R 12879363 intron,intron Aats-asp +,Nmda1 - chr2R_21_12875001 chr2R_12875001 RAL-406 990 chr2R 12897389 12897392 chr2R 12897514 12897517 4 125 15.5 7.0 11.2 0.3 128 chr2R 12897389 intron vg + chr2R 12897453 intron vg + chr2R 12897517 intron vg + chr2R_4_12895001 chr2R_12895001 RAL-406 991 chr2R 12897395 12897436 chr2R 12897512 12897556 16 120 5.5 6.0 5.8 2.4 161 chr2R 12897395 intron vg + chr2R 12897476 intron vg + chr2R 12897556 intron vg + chr2R_16_12895001 chr2R_12895001 RAL-406 992 chr2R 12952825 12952849 chr2R 12952929 12952952 6 103 0.0 4.5 2.2 1.9 127 chr2R 12952825 intergenic CG13321 + chr2R 12952888 intergenic CG13321 + chr2R 12952952 intergenic CG13321 + chr2R_6_12950001 chr2R_12950001 RAL-406 993 chr2R 12973417 12973449 chr2R 12973518 12973541 6 99 1.0 2.5 1.8 2.1 124 chr2R 12973417 intron Psc - chr2R 12973479 intron Psc - chr2R 12973541 intron Psc - chr2R_6_12970001 chr2R_12970001 RAL-406 994 chr2R 13035931 13035953 chr2R 13036052 13036074 14 120 3.0 0.0 1.5 5.6 143 chr2R 13035931 intergenic not near genes chr2R 13036002 intergenic not near genes chr2R 13036074 intergenic not near genes chr2R_14_13035001 chr2R_13035001 RAL-406 995 chr2R 13107845 13107854 chr2R 13107954 13107963 6 109 9.0 0.0 4.5 1.1 118 chr2R 13107845 intergenic not near genes chr2R 13107904 intergenic not near genes chr2R 13107963 intergenic not near genes chr2R_6_13105001 chr2R_13105001 RAL-406 996 chr2R 13125688 13125705 chr2R 13125791 13125808 10 103 2.5 6.0 4.2 1.9 120 chr2R 13125688 exon CG13325 + chr2R 13125748 3` UTR CG13325 + chr2R 13125808 intergenic CG13325 + chr2R_10_13125001 chr2R_13125001 RAL-406 997 chr2R 13136823 13136869 chr2R 13141641 13141670 Doc 12 4809 3.0 1.5 2.2 3.8 4847 chr2R 13136823 exon Cap-G + chr2R 13139246 intron Cap-G + chr2R 13141670 intron Cap-G + chr2R_12_13135001 chr2R_13135001 RAL-406 998 chr2R 13170699 13170751 chr2R 13170808 13170860 18 109 6.5 9.0 7.8 2.0 161 chr2R 13170699 3` UTR,3` UTR Spt-I +,CR45142 - chr2R 13170780 intergenic CR45142 -,Spt-I + chr2R 13170860 intergenic CR45142 -,Spt-I + chr2R_18_13170001 chr2R_13170001 RAL-406 999 chr2R 13218287 13218305 chr2R 13218390 13218398 10 102 9.0 0.0 4.5 1.8 111 chr2R 13218287 intron CG4630 - chr2R 13218342 intron CG4630 - chr2R 13218398 intron CG4630 - chr2R_10_13215001 chr2R_13215001 RAL-406 1000 chr2R 13305479 13305509 chr2R 13305581 13305601 10 97 10.0 5.5 7.8 1.1 122 chr2R 13305479 intergenic not near genes chr2R 13305540 intergenic not near genes chr2R 13305601 intergenic not near genes chr2R_10_13305001 chr2R_13305001 RAL-406 1001 chr2R 13321914 13321953 chr2R 13322040 13322053 14 122 4.5 8.5 6.5 1.9 139 chr2R 13321914 intergenic not near genes chr2R 13321984 intergenic not near genes chr2R 13322053 intergenic not near genes chr2R_14_13320001 chr2R_13320001 RAL-406 1002 chr2R 13403901 13403932 chr2R 13404006 13404037 8 105 7.5 4.5 6.0 1.1 136 chr2R 13403901 intergenic not near genes chr2R 13403969 intergenic not near genes chr2R 13404037 intergenic not near genes chr2R_8_13400001 chr2R_13400001 RAL-406 1003 chr2R 13439091 13439140 chr2R 13439224 13439274 9 132 2.0 4.0 3.0 2.2 183 chr2R 13439091 intergenic CG42321 -,cnn - chr2R 13439182 intergenic CG42321 -,cnn - chr2R 13439274 intergenic cnn -,CG42321 - chr2R_9_13435001 chr2R_13435001 RAL-406 1004 chr2R 13449666 13449675 chr2R 13449758 13449762 5 94 1.5 0.0 0.8 2.8 96 chr2R 13449666 intron cnn - chr2R 13449714 intron cnn - chr2R 13449762 intron cnn - chr2R_5_13445001 chr2R_13445001 RAL-406 1005 chr2R 13468861 13468867 chr2R 13468964 13468970 5 103 5.5 6.0 5.8 0.7 109 chr2R 13468861 intron arr - chr2R 13468916 intron arr - chr2R 13468970 intron arr - chr2R_5_13465001 chr2R_13465001 RAL-406 1006 chr2R 13471613 13471629 chr2R 13471700 13471733 4 96 0.0 7.0 3.5 0.9 120 chr2R 13471613 intron arr - chr2R 13471673 intron arr - chr2R 13471733 intron arr - chr2R_4_13470001 chr2R_13470001 RAL-406 1007 chr2R 13566239 13566280 chr2R 13566339 13566364 17 97 5.5 0.0 2.8 4.5 125 chr2R 13566239 intergenic not near genes chr2R 13566302 intergenic not near genes chr2R 13566364 intergenic not near genes chr2R_17_13565001 chr2R_13565001 RAL-406 1008 chr2R 13684244 13684269 chr2R 13684342 13684362 9 97 6.0 6.0 6.0 1.3 118 chr2R 13684244 intron fas + chr2R 13684303 intron fas + chr2R 13684362 intron fas + chr2R_9_13680001 chr2R_13680001 RAL-406 1009 chr2R 13738919 13738936 chr2R 13739042 13739059 6 122 5.0 3.0 4.0 1.2 140 chr2R 13738919 intron fas + chr2R 13738989 intron fas + chr2R 13739059 intron fas + chr2R_6_13735001 chr2R_13735001 RAL-406 1010 chr2R 13749482 13749529 chr2R 13749591 13749638 20 101 2.5 6.0 4.2 3.8 156 chr2R 13749482 intergenic fas + chr2R 13749560 intergenic fas + chr2R 13749638 intergenic fas + chr2R_20_13745001 chr2R_13745001 RAL-406 1011 chr2R 13768960 13769007 chr2R 13769079 13769122 10 116 5.0 6.0 5.5 1.5 162 chr2R 13768960 intergenic not near genes chr2R 13769041 intergenic not near genes chr2R 13769122 intergenic not near genes chr2R_10_13765001 chr2R_13765001 RAL-406 1012 chr2R 13861284 13861308 chr2R 13861615 13861639 13 328 4.0 3.5 3.8 2.7 355 chr2R 13861284 exon CG16935 - chr2R 13861462 intron CG16935 - chr2R 13861639 exon CG16935 - chr2R_13_13860001 chr2R_13860001 RAL-406 1013 chr2R 13905585 13905626 chr2R 13907585 13907592 Rt1a 8 1997 7.0 1.0 4.0 1.6 2007 chr2R 13905585 intron shot - chr2R 13906588 intron shot - chr2R 13907592 intron shot - chr2R_8_13905001 chr2R_13905001 RAL-406 1014 chr2R 13924449 13924456 chr2R 13924585 13924592 5 136 15.5 4.5 10.0 0.5 143 chr2R 13924449 intron shot - chr2R 13924520 intron shot - chr2R 13924592 intron shot - chr2R_5_13920001 chr2R_13920001 RAL-406 1015 chr2R 13995231 13995240 chr2R 13995296 13995335 7 91 1.5 3.0 2.2 2.2 104 chr2R 13995231 intron mam + chr2R 13995283 intron mam + chr2R 13995335 intron mam + chr2R_7_13995001 chr2R_13995001 RAL-406 1016 chr2R 14018144 14018190 chr2R 14018248 14018288 23 100 6.5 8.5 7.5 2.7 144 chr2R 14018144 intron mam + chr2R 14018216 intron mam + chr2R 14018288 intron mam + chr2R_23_14015001 chr2R_14015001 RAL-406 1017 chr2R 14037244 14037288 chr2R 14037347 14037391 8 99 1.0 8.0 4.5 1.5 147 chr2R 14037244 intron mam + chr2R 14037318 intron mam + chr2R 14037391 intron mam + chr2R_8_14035001 chr2R_14035001 RAL-406 1018 chr2R 14114848 14114872 chr2R 14114947 14114971 4 96 5.0 5.0 5.0 0.7 123 chr2R 14114848 intron Prosap - chr2R 14114910 intron Prosap - chr2R 14114971 intron Prosap - chr2R_4_14110001 chr2R_14110001 RAL-406 1019 chr2R 14114875 14114889 chr2R 14114941 14114984 8 94 2.5 4.5 3.5 1.8 109 chr2R 14114875 intron Prosap - chr2R 14114930 intron Prosap - chr2R 14114984 intron Prosap - chr2R_8_14110001 chr2R_14110001 RAL-406 1020 chr2R 14124364 14124415 chr2R 14124471 14124522 10 103 2.0 4.5 3.2 2.4 158 chr2R 14124364 intron Prosap - chr2R 14124443 intron Prosap - chr2R 14124522 intron Prosap - chr2R_10_14120001 chr2R_14120001 RAL-406 1021 chr2R 14285028 14285048 chr2R 14285145 14285165 17 116 7.0 8.0 7.5 2.0 137 chr2R 14285028 intron Ih + chr2R 14285096 intron Ih + chr2R 14285165 intron Ih + chr2R_17_14285001 chr2R_14285001 RAL-406 1022 chr2R 14393856 14393877 chr2R 14393961 14393982 11 103 11.0 6.0 8.5 1.2 126 chr2R 14393856 intergenic not near genes chr2R 14393919 intergenic not near genes chr2R 14393982 intergenic not near genes chr2R_11_14390001 chr2R_14390001 RAL-406 1023 chr2R 14393881 14393896 chr2R 14393951 14394001 10 97 6.5 4.0 5.2 1.6 120 chr2R 14393881 intergenic not near genes chr2R 14393941 intergenic not near genes chr2R 14394001 intergenic not near genes chr2R_10_14390001 chr2R_14390001 RAL-406 1024 chr2R 14394215 14394228 chr2R 14399024 14399037 Doc 6 4809 11.0 12.0 11.5 0.5 4822 chr2R 14394215 intergenic not near genes chr2R 14396626 intergenic not near genes chr2R 14399037 intergenic not near genes chr2R_6_14395001 chr2R_14395001 RAL-406 1025 chr2R 14467295 14467322 chr2R 14476466 14476500 roo 6 9173 1.5 5.0 3.2 1.4 9205 chr2R 14467295 intergenic not near genes chr2R 14471898 intergenic not near genes chr2R 14476500 5` UTR CR44462 + chr2R_6_14470001 chr2R_14470001 RAL-406 1026 chr2R 14497371 14497417 chr2R 14498552 14498603 1360 27 1181 3.5 7.5 5.5 4.2 1232 chr2R 14497371 3` UTR Cpsf160 - chr2R 14497987 intron Cpsf160 - chr2R 14498603 3` UTR Cpsf160 - chr2R_27_14495001 chr2R_14495001 RAL-406 1027 chr2R 14514468 14514500 chr2R 14514584 14514603 6 112 6.0 12.0 9.0 0.6 135 chr2R 14514468 intron,intron Cpr51A -,CG30197 + chr2R 14514536 intron,intron Cpr51A -,CG30197 + chr2R 14514603 intron,intron Cpr51A -,CG30197 + chr2R_6_14510001 chr2R_14510001 RAL-406 1028 chr2R 14533759 14533786 chr2R 14533860 14533889 4 98 1.5 3.5 2.5 1.1 130 chr2R 14533759 intron ttv + chr2R 14533824 intron ttv + chr2R 14533889 intron ttv + chr2R_4_14530001 chr2R_14530001 RAL-406 1029 chr2R 14653886 14653928 chr2R 14654006 14654048 10 119 4.0 4.0 4.0 2.0 162 chr2R 14653886 intergenic not near genes chr2R 14653967 intergenic not near genes chr2R 14654048 intergenic not near genes chr2R_10_14650001 chr2R_14650001 RAL-406 1030 chr2R 14733388 14733409 chr2R 14733494 14733517 4 99 1.5 4.5 3.0 1.0 129 chr2R 14733388 intergenic not near genes chr2R 14733452 intergenic not near genes chr2R 14733517 intergenic not near genes chr2R_4_14730001 chr2R_14730001 RAL-406 1031 chr2R 14799882 14799894 chr2R 14799945 14799990 11 93 4.0 9.5 6.8 1.4 108 chr2R 14799882 intron kn - chr2R 14799936 intron kn - chr2R 14799990 intron kn - chr2R_11_14795001 chr2R_14795001 RAL-406 1032 chr2R 14805425 14805469 chr2R 14805516 14805529 9 89 2.5 5.0 3.8 1.9 104 chr2R 14805425 intron kn - chr2R 14805477 intron kn - chr2R 14805529 intron kn - chr2R_9_14805001 chr2R_14805001 RAL-406 1033 chr2R 14820881 14820932 chr2R 14820988 14821039 13 104 1.0 8.0 4.5 2.4 158 chr2R 14820881 intergenic not near genes chr2R 14820960 intergenic not near genes chr2R 14821039 intergenic not near genes chr2R_13_14820001 chr2R_14820001 RAL-406 1034 chr2R 14842372 14842392 chr2R 14842488 14842508 9 115 4.5 4.5 4.5 1.6 136 chr2R 14842372 intergenic NaPi-T - chr2R 14842440 intergenic NaPi-T - chr2R 14842508 intergenic NaPi-T - chr2R_9_14840001 chr2R_14840001 RAL-406 1035 chr2R 14889193 14889221 chr2R 14897821 14897844 Max-element 10 8624 10.0 0.0 5.0 1.7 8651 chr2R 14889193 intergenic Cyp6a8 - chr2R 14893518 intergenic not near genes chr2R 14897844 intergenic not near genes chr2R_10_14890001 chr2R_14890001 RAL-406 1036 chr2R 14911681 14911709 chr2R 14911824 14911852 12 143 6.5 4.5 5.5 1.8 171 chr2R 14911681 intron CG10249 - chr2R 14911766 intron CG10249 - chr2R 14911852 intron CG10249 - chr2R_12_14910001 chr2R_14910001 RAL-406 1037 chr2R 14911710 14911726 chr2R 14911823 14911869 7 136 4.5 4.5 4.5 1.3 159 chr2R 14911710 intron CG10249 - chr2R 14911790 intron CG10249 - chr2R 14911869 intron CG10249 - chr2R_7_14910001 chr2R_14910001 RAL-406 1038 chr2R 14919067 14919090 chr2R 14919173 14919196 14 106 9.5 8.0 8.8 1.4 129 chr2R 14919067 intron CG10249 - chr2R 14919132 intron CG10249 - chr2R 14919196 intron CG10249 - chr2R_14_14915001 chr2R_14915001 RAL-406 1039 chr2R 14919093 14919108 chr2R 14919199 14919214 9 105 6.5 13.0 9.8 0.8 121 chr2R 14919093 intron CG10249 - chr2R 14919154 intron CG10249 - chr2R 14919214 intron CG10249 - chr2R_9_14915001 chr2R_14915001 RAL-406 1040 chr2R 14922127 14922224 chr2R 14922222 14922382 16 149 0.0 0.0 0.0 16.0 255 chr2R 14922127 intron CG10249 - chr2R 14922254 intron CG10249 - chr2R 14922382 intron CG10249 - chr2R_16_14920001 chr2R_14920001 RAL-406 1041 chr2R 14955657 14955663 chr2R 14955756 14955772 4 106 12.5 1.0 6.8 0.5 115 chr2R 14955657 intron aPKC - chr2R 14955714 intron aPKC - chr2R 14955772 intron aPKC - chr2R_4_14955001 chr2R_14955001 RAL-406 1042 chr2R 14955664 14955692 chr2R 14955753 14955786 13 103 5.5 1.0 3.2 3.1 122 chr2R 14955664 intron aPKC - chr2R 14955725 intron aPKC - chr2R 14955786 intron aPKC - chr2R_13_14955001 chr2R_14955001 RAL-406 1043 chr2R 14968042 14968082 chr2R 14968141 14968180 11 98 1.0 1.5 1.2 5.0 138 chr2R 14968042 intron ckn + chr2R 14968111 intron ckn + chr2R 14968180 intron ckn + chr2R_11_14965001 chr2R_14965001 RAL-406 1044 chr2R 14987365 14987413 chr2R 14987529 14987577 24 161 3.0 7.5 5.2 3.9 212 chr2R 14987365 intron pcs + chr2R 14987471 intron pcs + chr2R 14987577 intron pcs + chr2R_24_14985001 chr2R_14985001 RAL-406 1045 chr2R 14998498 14998506 chr2R 14998657 14998666 7 159 4.5 5.5 5.0 1.2 168 chr2R 14998498 intergenic not near genes chr2R 14998582 intergenic not near genes chr2R 14998666 intergenic not near genes chr2R_7_14995001 chr2R_14995001 RAL-406 1046 chr2R 15004707 15004752 chr2R 15005056 15005101 jockey 22 347 5.0 7.5 6.2 3.1 394 chr2R 15004707 intergenic not near genes chr2R 15004904 intergenic not near genes chr2R 15005101 intergenic not near genes chr2R_22_15000001 chr2R_15000001 RAL-406 1047 chr2R 15015441 15015480 chr2R 15022885 15022924 mdg1 14 7440 5.0 4.0 4.5 2.5 7483 chr2R 15015441 intron hbs + chr2R 15019182 intron hbs + chr2R 15022924 intron hbs + chr2R_14_15015001 chr2R_15015001 RAL-406 1048 chr2R 15051063 15051109 chr2R 15051165 15051211 21 98 5.0 4.5 4.8 3.6 148 chr2R 15051063 intergenic not near genes chr2R 15051137 intergenic not near genes chr2R 15051211 intergenic not near genes chr2R_21_15050001 chr2R_15050001 RAL-406 1049 chr2R 15084960 15084993 chr2R 15092029 15092062 297 12 7068 5.5 7.5 6.5 1.6 7102 chr2R 15084960 intergenic not near genes chr2R 15088511 intergenic not near genes chr2R 15092062 5` UTR CR44457 + chr2R_12_15085001 chr2R_15085001 RAL-406 1050 chr2R 15084995 15085006 chr2R 15092028 15092075 297 11 7063 4.0 7.0 5.5 1.7 7080 chr2R 15084995 intergenic not near genes chr2R 15088535 intergenic not near genes chr2R 15092075 5` UTR CR44457 + chr2R_11_15085001 chr2R_15085001 RAL-406 1051 chr2R 15094867 15094914 chr2R 15094964 15094996 15 94 4.5 4.0 4.2 2.9 129 chr2R 15094867 intergenic not near genes chr2R 15094932 intergenic not near genes chr2R 15094996 intergenic not near genes chr2R_15_15090001 chr2R_15090001 RAL-406 1052 chr2R 15137956 15137998 chr2R 15138056 15138100 9 98 10.0 0.0 5.0 1.5 144 chr2R 15137956 intron chn + chr2R 15138028 intron chn + chr2R 15138100 intron chn + chr2R_9_15135001 chr2R_15135001 RAL-406 1053 chr2R 15374789 15375056 chr2R 15374892 15375186 5 108 8.5 7.0 7.8 0.6 397 chr2R 15374789 intergenic not near genes chr2R 15374988 intergenic not near genes chr2R 15375186 intergenic not near genes chr2R_5_15370001 chr2R_15370001 RAL-406 1054 chr2R 15472052 15472061 chr2R 15472125 15472165 5 98 0.0 6.5 3.2 1.2 113 chr2R 15472052 intergenic CG8180 -,CG43729 + chr2R 15472108 intergenic CG8180 -,CG43729 + chr2R 15472165 intergenic CG8180 -,CG43729 + chr2R_5_15470001 chr2R_15470001 RAL-406 1055 chr2R 15498141 15498193 chr2R 15498243 15498297 10 102 5.0 0.5 2.8 2.6 156 chr2R 15498141 intergenic not near genes chr2R 15498219 intergenic not near genes chr2R 15498297 intergenic not near genes chr2R_10_15495001 chr2R_15495001 RAL-406 1056 chr2R 15532273 15532293 chr2R 15532369 15532389 6 95 7.0 5.5 6.2 0.8 116 chr2R 15532273 intergenic Khc-73 - chr2R 15532331 intergenic Khc-73 - chr2R 15532389 intergenic Khc-73 - chr2R_6_15530001 chr2R_15530001 RAL-406 1057 chr2R 15532300 15532320 chr2R 15532365 15532416 9 91 4.0 5.5 4.8 1.6 116 chr2R 15532300 intergenic Khc-73 - chr2R 15532358 intergenic Khc-73 - chr2R 15532416 intergenic Khc-73 - chr2R_9_15530001 chr2R_15530001 RAL-406 1058 chr2R 15537690 15537741 chr2R 15537792 15537843 24 101 3.0 4.0 3.5 5.3 153 chr2R 15537690 3` UTR CG30471 + chr2R 15537766 3` UTR CG30471 + chr2R 15537843 intergenic CG30471 +,CG30467 + chr2R_24_15535001 chr2R_15535001 RAL-406 1059 chr2R 15606113 15606128 chr2R 15606210 15606225 7 97 11.5 4.5 8.0 0.8 112 chr2R 15606113 intergenic not near genes chr2R 15606169 intergenic not near genes chr2R 15606225 intergenic not near genes chr2R_7_15605001 chr2R_15605001 RAL-406 1060 chr2R 15655972 15655985 chr2R 15656064 15656085 7 99 7.0 6.5 6.8 0.9 113 chr2R 15655972 intron CG42524 + chr2R 15656028 intron CG42524 + chr2R 15656085 intron CG42524 + chr2R_7_15655001 chr2R_15655001 RAL-406 1061 chr2R 15655989 15656013 chr2R 15656063 15656101 9 95 1.5 6.0 3.8 1.9 112 chr2R 15655989 intron CG42524 + chr2R 15656045 intron CG42524 + chr2R 15656101 intron CG42524 + chr2R_9_15655001 chr2R_15655001 RAL-406 1062 chr2R 15685342 15685394 chr2R 15685465 15685517 12 122 3.0 2.5 2.8 3.2 175 chr2R 15685342 intron,exon Ranbp11 +,CG30082 - chr2R 15685430 intron,intron Ranbp11 +,CG30082 - chr2R 15685517 intron,intron Ranbp11 +,CG30082 - chr2R_12_15685001 chr2R_15685001 RAL-406 1063 chr2R 15833504 15833524 chr2R 15833611 15833626 4 105 4.0 4.5 4.2 0.8 122 chr2R 15833504 intron,intron tun +,Poxn - chr2R 15833565 intron,intron tun +,Poxn - chr2R 15833626 intron,intron tun +,Poxn - chr2R_4_15830001 chr2R_15830001 RAL-406 1064 chr2R 15845131 15845183 chr2R 15845230 15845282 7 99 0.0 3.0 1.5 2.8 151 chr2R 15845131 intron,intron tun +,CG8249 - chr2R 15845206 intron,intron tun +,CG8249 - chr2R 15845282 intron,intron tun +,CG8249 - chr2R_7_15845001 chr2R_15845001 RAL-406 1065 chr2R 16013995 16014025 chr2R 16014125 16014138 4 122 10.5 9.0 9.8 0.4 143 chr2R 16013995 exon Prosbeta1 - chr2R 16014066 intron Prosbeta1 - chr2R 16014138 exon Prosbeta1 - chr2R_4_16010001 chr2R_16010001 RAL-406 1066 chr2R 16131204 16131253 chr2R 16131318 16131367 19 112 3.5 7.5 5.5 2.9 163 chr2R 16131204 intron spin + chr2R 16131286 intron spin + chr2R 16131367 intron spin + chr2R_19_16130001 chr2R_16130001 RAL-406 1067 chr2R 16245410 16245430 chr2R 16245509 16245544 14 111 1.0 4.5 2.8 3.7 134 chr2R 16245410 intron CngA - chr2R 16245477 intron CngA - chr2R 16245544 intron CngA - chr2R_14_16245001 chr2R_16245001 RAL-406 1068 chr2R 16307867 16307909 chr2R 16307964 16308006 17 95 6.5 7.5 7.0 2.1 139 chr2R 16307867 5` UTR Nox + chr2R 16307936 5` UTR Nox + chr2R 16308006 5` UTR Nox + chr2R_17_16305001 chr2R_16305001 RAL-406 1069 chr2R 16380119 16380149 chr2R 16380216 16380262 4 112 2.5 2.0 2.2 1.2 143 chr2R 16380119 5` UTR,3` UTR CR45316 +,CR45317 - chr2R 16380190 3` UTR CR45317 - chr2R 16380262 intergenic CR45317 -,CR45316 +,CG43187 + chr2R_4_16380001 chr2R_16380001 RAL-406 1070 chr2R 16460476 16460760 chr2R 16460574 16460862 8 98 5.5 7.5 6.5 1.1 386 chr2R 16460476 intergenic not near genes chr2R 16460669 intergenic not near genes chr2R 16460862 intergenic not near genes chr2R_8_16460001 chr2R_16460001 RAL-406 1071 chr2R 16489260 16489271 chr2R 16489354 16489371 7 102 10.5 3.0 6.8 0.9 111 chr2R 16489260 intergenic CG33459 + chr2R 16489316 intergenic CG33459 + chr2R 16489371 intergenic CG33459 + chr2R_7_16485001 chr2R_16485001 RAL-406 1072 chr2R 16489272 16489296 chr2R 16489351 16489395 6 98 6.0 2.5 4.2 1.2 123 chr2R 16489272 intergenic CG33459 + chr2R 16489334 intergenic CG33459 + chr2R 16489395 intergenic CG33459 + chr2R_6_16485001 chr2R_16485001 RAL-406 1073 chr2R 16530476 16530504 chr2R 16530669 16530696 5 193 7.0 0.0 3.5 1.1 220 chr2R 16530476 exon Sema-2a + chr2R 16530586 intron Sema-2a + chr2R 16530696 intron Sema-2a + chr2R_5_16530001 chr2R_16530001 RAL-406 1074 chr2R 16539607 16539671 chr2R 16544844 16544900 copia 9 5227 1.5 1.5 1.5 3.6 5293 chr2R 16539607 intergenic not near genes chr2R 16542254 intergenic not near genes chr2R 16544900 intergenic not near genes chr2R_9_16540001 chr2R_16540001 RAL-406 1075 chr2R 16546980 16546987 chr2R 16547079 16547087 5 100 0.5 0.0 0.2 4.2 107 chr2R 16546980 intergenic not near genes chr2R 16547034 intergenic not near genes chr2R 16547087 intergenic not near genes chr2R_5_16545001 chr2R_16545001 RAL-406 1076 chr2R 16571860 16571905 chr2R 16571970 16572020 18 112 3.0 8.0 5.5 2.8 160 chr2R 16571860 intergenic CG4927 + chr2R 16571940 intergenic CG4927 + chr2R 16572020 intergenic CG4927 + chr2R_18_16570001 chr2R_16570001 RAL-406 1077 chr2R 16614109 16614159 chr2R 16614348 16614398 21 238 4.5 7.5 6.0 3.0 289 chr2R 16614109 intron CG5065 + chr2R 16614254 intron CG5065 + chr2R 16614398 intron CG5065 + chr2R_21_16610001 chr2R_16610001 RAL-406 1078 chr2R 16617069 16617090 chr2R 16617143 16617163 12 91 5.5 5.0 5.2 1.9 94 chr2R 16617069 intron CG5065 + chr2R 16617116 intron CG5065 + chr2R 16617163 intron CG5065 + chr2R_12_16615001 chr2R_16615001 RAL-406 1079 chr2R 16689148 16689174 chr2R 16689482 16689484 6 328 3.0 2.0 2.5 1.7 336 chr2R 16689148 intron CG30463 - chr2R 16689316 intron CG30463 - chr2R 16689484 intron CG30463 - chr2R_6_16685001 chr2R_16685001 RAL-406 1080 chr2R 16705078 16705106 chr2R 16705176 16705213 11 101 2.5 4.0 3.2 2.6 135 chr2R 16705078 intron CG30463 - chr2R 16705146 intron CG30463 - chr2R 16705213 intron CG30463 - chr2R_11_16705001 chr2R_16705001 RAL-406 1081 chr2R 16732603 16732654 chr2R 16732710 16732761 18 99 3.0 8.5 5.8 2.6 158 chr2R 16732603 5` UTR CG30463 - chr2R 16732682 5` UTR CG30463 - chr2R 16732761 5` UTR CG30463 - chr2R_18_16730001 chr2R_16730001 RAL-406 1082 chr2R 16737125 16737149 chr2R 16737242 16737269 9 114 8.5 5.0 6.8 1.2 144 chr2R 16737125 3` UTR CG43104 - chr2R 16737197 3` UTR CG43104 - chr2R 16737269 exon CG43104 - chr2R_9_16735001 chr2R_16735001 RAL-406 1083 chr2R 16737153 16737165 chr2R 16737240 16737285 6 112 4.5 5.0 4.8 1.0 132 chr2R 16737153 3` UTR CG43104 - chr2R 16737219 3` UTR CG43104 - chr2R 16737285 exon CG43104 - chr2R_6_16735001 chr2R_16735001 RAL-406 1084 chr2R 16893756 16893804 chr2R 16893858 16893884 17 96 8.5 8.5 8.5 1.8 128 chr2R 16893756 intron CG8910 - chr2R 16893820 intron CG8910 - chr2R 16893884 intron CG8910 - chr2R_17_16890001 chr2R_16890001 RAL-406 1085 chr2R 16904741 16904883 chr2R 16904838 16904959 22 93 0.5 0.0 0.2 18.3 218 chr2R 16904741 intergenic not near genes chr2R 16904850 intergenic not near genes chr2R 16904959 intergenic not near genes chr2R_22_16900001 chr2R_16900001 RAL-406 1086 chr2R 16982078 16982095 chr2R 16982176 16982193 7 98 0.0 8.0 4.0 1.4 115 chr2R 16982078 intron Cbp53E + chr2R 16982136 intron Cbp53E + chr2R 16982193 intron Cbp53E + chr2R_7_16980001 chr2R_16980001 RAL-406 1087 chr2R 17079032 17079088 chr2R 17079134 17079154 24 97 3.0 6.0 4.5 4.4 122 chr2R 17079032 intron CG30460 - chr2R 17079093 intron CG30460 - chr2R 17079154 intron CG30460 - chr2R_24_17075001 chr2R_17075001 RAL-406 1088 chr2R 17132844 17132863 chr2R 17132964 17132982 5 119 3.5 6.0 4.8 0.9 138 chr2R 17132844 intergenic not near genes chr2R 17132913 intergenic not near genes chr2R 17132982 intergenic Acp54A1 + chr2R_5_17130001 chr2R_17130001 RAL-406 1089 chr2R 17147232 17147243 chr2R 17152277 17152294 jockey 4 5050 7.0 9.0 8.0 0.4 5062 chr2R 17147232 intergenic not near genes chr2R 17149763 intergenic not near genes chr2R 17152294 intergenic not near genes chr2R_4_17145001 chr2R_17145001 RAL-406 1090 chr2R 17147244 17147260 chr2R 17152272 17152311 jockey 6 5041 5.5 8.5 7.0 0.8 5067 chr2R 17147244 intergenic not near genes chr2R 17149778 intergenic not near genes chr2R 17152311 intergenic not near genes chr2R_6_17145001 chr2R_17145001 RAL-406 1091 chr2R 17161162 17161181 chr2R 17161267 17161286 6 101 7.5 6.5 7.0 0.8 124 chr2R 17161162 intergenic CG30457 - chr2R 17161224 intergenic CG30457 - chr2R 17161286 intergenic CG30457 - chr2R_6_17160001 chr2R_17160001 RAL-406 1092 chr2R 17161186 17161203 chr2R 17161261 17161308 9 96 3.0 4.5 3.8 1.9 122 chr2R 17161186 intergenic CG30457 - chr2R 17161247 intergenic CG30457 - chr2R 17161308 intergenic CG30457 - chr2R_9_17160001 chr2R_17160001 RAL-406 1093 chr2R 17208846 17208900 chr2R 17208943 17208962 19 84 3.0 0.5 1.8 6.8 116 chr2R 17208846 intergenic not near genes chr2R 17208904 intergenic not near genes chr2R 17208962 intergenic not near genes chr2R_19_17205001 chr2R_17205001 RAL-406 1094 chr2R 17236489 17236532 chr2R 17241713 17241755 copia 11 5215 4.0 4.5 4.2 2.1 5266 chr2R 17236489 intron mbl + chr2R 17239122 intron mbl + chr2R 17241755 intron mbl + chr2R_11_17235001 chr2R_17235001 RAL-406 1095 chr2R 17395279 17395317 chr2R 17395387 17395425 12 106 5.5 7.0 6.2 1.7 146 chr2R 17395279 intron Sip1 + chr2R 17395352 intron Sip1 + chr2R 17395425 intron Sip1 + chr2R_12_17395001 chr2R_17395001 RAL-406 1096 chr2R 17419917 17419963 chr2R 17420021 17420061 6 101 0.0 1.0 0.5 4.0 144 chr2R 17419917 5` UTR cnk - chr2R 17419989 5` UTR cnk - chr2R 17420061 intergenic cnk -,l(2)k01209 + chr2R_6_17415001 chr2R_17415001 RAL-406 1097 chr2R 17458991 17459036 chr2R 17459095 17459121 23 103 4.5 7.5 6.0 3.3 130 chr2R 17458991 intron CG14478 + chr2R 17459056 intron CG14478 + chr2R 17459121 intron CG14478 + chr2R_23_17455001 chr2R_17455001 RAL-406 1098 chr2R 17485908 17485914 chr2R 17490687 17490694 F-element 4 4780 17.0 3.5 10.2 0.4 4786 chr2R 17485908 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488301 intron NT5E-2 + chr2R 17490694 intron NT5E-2 + chr2R_4_17485001 chr2R_17485001 RAL-406 1099 chr2R 17485916 17485950 chr2R 17490686 17490730 F-element 9 4779 9.0 3.5 6.2 1.2 4814 chr2R 17485916 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488323 intron NT5E-2 + chr2R 17490730 intron NT5E-2 + chr2R_9_17485001 chr2R_17485001 RAL-406 1100 chr2R 17708374 17708421 chr2R 17708475 17708522 28 99 7.5 5.5 6.5 3.7 148 chr2R 17708374 intron CG6424 - chr2R 17708448 intron CG6424 - chr2R 17708522 intron CG6424 - chr2R_28_17705001 chr2R_17705001 RAL-406 1101 chr2R 17709965 17710115 chr2R 17710076 17710213 30 102 1.0 1.5 1.2 13.6 248 chr2R 17709965 intron CG6424 - chr2R 17710089 intron CG6424 - chr2R 17710213 intron CG6424 - chr2R_30_17710001 chr2R_17710001 RAL-406 1102 chr2R 17782347 17782394 chr2R 17783565 17783617 pogo 22 1222 3.0 7.0 5.0 3.7 1270 chr2R 17782347 intergenic CG33981 -,fab1 - chr2R 17782982 intergenic not near genes chr2R 17783617 intergenic mir-31a - chr2R_22_17780001 chr2R_17780001 RAL-406 1103 chr2R 17784007 17784053 chr2R 17784267 17784314 pogo 11 258 3.5 2.0 2.8 2.9 307 chr2R 17784007 intergenic mir-31a - chr2R 17784160 intergenic mir-31a - chr2R 17784314 intergenic mir-31a - chr2R_11_17780001 chr2R_17780001 RAL-406 1104 chr2R 17812805 17812812 chr2R 17812903 17812909 4 98 11.0 7.5 9.2 0.4 104 chr2R 17812805 intron grh + chr2R 17812857 intron grh + chr2R 17812909 intron grh + chr2R_4_17810001 chr2R_17810001 RAL-406 1105 chr2R 17960155 17960173 chr2R 17960248 17960263 9 101 4.0 7.0 5.5 1.4 108 chr2R 17960155 intergenic not near genes chr2R 17960209 intergenic not near genes chr2R 17960263 intergenic not near genes chr2R_9_17960001 chr2R_17960001 RAL-406 1106 chr2R 18045652 18045700 chr2R 18046024 18046071 jockey 25 370 5.5 9.5 7.5 2.9 419 chr2R 18045652 intergenic not near genes chr2R 18045862 intergenic not near genes chr2R 18046071 intergenic CG5767 - chr2R_25_18045001 chr2R_18045001 RAL-406 1107 chr2R 18074587 18074616 chr2R 18074683 18074712 11 93 5.5 5.0 5.2 1.8 125 chr2R 18074587 intron CG34386 + chr2R 18074650 intron CG34386 + chr2R 18074712 intron CG34386 + chr2R_11_18070001 chr2R_18070001 RAL-406 1108 chr2R 18111670 18111713 chr2R 18115558 18115599 F-element 16 3888 10.5 8.0 9.2 1.6 3929 chr2R 18111670 intergenic not near genes chr2R 18113634 intergenic not near genes chr2R 18115599 intergenic not near genes chr2R_16_18110001 chr2R_18110001 RAL-406 1109 chr2R 18124320 18124371 chr2R 18124417 18124468 24 92 3.5 1.5 2.5 6.9 148 chr2R 18124320 intron stau - chr2R 18124394 intron stau - chr2R 18124468 intron stau - chr2R_24_18120001 chr2R_18120001 RAL-406 1110 chr2R 18210775 18210803 chr2R 18210885 18210939 6 125 3.0 4.5 3.8 1.2 164 chr2R 18210775 5` UTR CR45147 + chr2R 18210857 intergenic CR45147 + chr2R 18210939 intergenic CR45147 + chr2R_6_18210001 chr2R_18210001 RAL-406 1111 chr2R 18260861 18260879 chr2R 18261026 18261039 9 164 1.5 0.0 0.8 5.0 178 chr2R 18260861 intergenic not near genes chr2R 18260950 intergenic not near genes chr2R 18261039 intergenic not near genes chr2R_9_18260001 chr2R_18260001 RAL-406 1112 chr2R 18308262 18308319 chr2R 18308388 18308445 15 124 6.5 3.0 4.8 2.6 183 chr2R 18308262 intron sbb - chr2R 18308354 intron sbb - chr2R 18308445 intron sbb - chr2R_15_18305001 chr2R_18305001 RAL-406 1113 chr2R 18358373 18358417 chr2R 18372605 18372649 roo 28 14229 5.5 5.0 5.2 4.5 14276 chr2R 18358373 intergenic not near genes chr2R 18365511 intergenic not near genes chr2R 18372649 intergenic not near genes chr2R_28_18365001 chr2R_18365001 RAL-406 1114 chr2R 18376716 18376740 chr2R 18376824 18376850 13 108 12.0 2.5 7.2 1.6 134 chr2R 18376716 intergenic not near genes chr2R 18376783 intergenic not near genes chr2R 18376850 intergenic not near genes chr2R_13_18375001 chr2R_18375001 RAL-406 1115 chr2R 18401660 18401704 chr2R 18402458 18402488 6 786 43.0 43.5 43.2 0.1 828 chr2R 18401660 intergenic GstE3 + chr2R 18402074 intergenic not near genes chr2R 18402488 intergenic not near genes chr2R_6_18400001 chr2R_18400001 RAL-406 1116 chr2R 18405725 18405788 chr2R 18405826 18405885 10 94 2.0 0.0 1.0 5.0 160 chr2R 18405725 intergenic GstE6 +,GstE5 + chr2R 18405805 intergenic GstE6 +,GstE5 + chr2R 18405885 intergenic GstE6 + chr2R_10_18405001 chr2R_18405001 RAL-406 1117 chr2R 18408274 18408312 chr2R 18408408 18408449 8 134 3.5 9.0 6.2 1.1 175 chr2R 18408274 exon GstE8 + chr2R 18408362 exon GstE8 + chr2R 18408449 exon GstE8 + chr2R_8_18405001 chr2R_18405001 RAL-406 1118 chr2R 18463680 18463688 chr2R 18463801 18463809 4 121 7.5 1.0 4.2 0.8 129 chr2R 18463680 intron CG30116 - chr2R 18463744 intron CG30116 - chr2R 18463809 intron CG30116 - chr2R_4_18460001 chr2R_18460001 RAL-406 1119 chr2R 18590846 18590893 chr2R 18600018 18600052 roo 6 9166 4.0 2.5 3.2 1.4 9206 chr2R 18590846 intron GEFmeso - chr2R 18595449 intron GEFmeso - chr2R 18600052 intron GEFmeso - chr2R_6_18595001 chr2R_18595001 RAL-406 1120 chr2R 18646383 18646437 chr2R 18646548 18646601 25 162 4.0 3.5 3.8 5.2 218 chr2R 18646383 intron SP2637 - chr2R 18646492 intron SP2637 - chr2R 18646601 intron SP2637 - chr2R_25_18645001 chr2R_18645001 RAL-406 1121 chr2R 18677822 18677825 chr2R 20254974 20254974 4 1577151 14.5 18.0 16.2 0.2 1577152 chr2R 18677822 intergenic not near genes chr2R 19466398 intron par-1 + chr2R 20254974 3` UTR Ate1 - chr2R_4_19465001 chr2R_19465001 RAL-406 1122 chr2R 18692880 18692895 chr2R 18692987 18693002 4 106 3.5 3.0 3.2 1.0 122 chr2R 18692880 intron Sik3 + chr2R 18692941 intron Sik3 + chr2R 18693002 intron Sik3 + chr2R_4_18690001 chr2R_18690001 RAL-406 1123 chr2R 18769612 18769623 chr2R 18769739 18769740 6 125 3.5 14.5 9.0 0.6 128 chr2R 18769612 intron Mctp + chr2R 18769676 intron Mctp + chr2R 18769740 intron Mctp + chr2R_6_18765001 chr2R_18765001 RAL-406 1124 chr2R 18858254 18858264 chr2R 18860093 18860103 Bari1 4 1839 6.0 16.5 11.2 0.3 1849 chr2R 18858254 intergenic Jheh2 - chr2R 18859178 intergenic not near genes chr2R 18860103 intergenic Jheh3 - chr2R_4_18855001 chr2R_18855001 RAL-406 1125 chr2R 18862288 18862339 chr2R 18862395 18862473 7 113 0.0 0.0 0.0 7.0 185 chr2R 18862288 intergenic Jheh3 - chr2R 18862380 intergenic Jheh3 -,CG43069 + chr2R 18862473 intergenic CG43069 +,Jheh3 - chr2R_7_18860001 chr2R_18860001 RAL-406 1126 chr2R 18883068 18883099 chr2R 18883166 18883167 9 90 10.5 2.0 6.2 1.2 99 chr2R 18883068 intron sano + chr2R 18883118 intron sano + chr2R 18883167 intron sano + chr2R_9_18880001 chr2R_18880001 RAL-406 1127 chr2R 18930436 18930485 chr2R 18930549 18930598 26 112 4.0 10.5 7.2 3.2 162 chr2R 18930436 intron sano + chr2R 18930517 intron sano + chr2R 18930598 intron sano + chr2R_26_18930001 chr2R_18930001 RAL-406 1128 chr2R 18939562 18939579 chr2R 18939660 18939673 6 97 8.5 4.0 6.2 0.8 111 chr2R 18939562 intron sano + chr2R 18939618 intron sano + chr2R 18939673 intron sano + chr2R_6_18935001 chr2R_18935001 RAL-406 1129 chr2R 18939581 18939612 chr2R 18939659 18939699 6 90 3.5 4.0 3.8 1.2 118 chr2R 18939581 intron sano + chr2R 18939640 intron sano + chr2R 18939699 intron sano + chr2R_6_18935001 chr2R_18935001 RAL-406 1130 chr2R 19026029 19026058 chr2R 19026150 19026179 16 123 9.0 5.5 7.2 2.0 150 chr2R 19026029 intron 5-HT1B - chr2R 19026104 intron 5-HT1B - chr2R 19026179 intron 5-HT1B - chr2R_16_19025001 chr2R_19025001 RAL-406 1131 chr2R 19244460 19244472 chr2R 19244559 19244571 8 98 0.0 7.0 3.5 1.8 111 chr2R 19244460 intergenic not near genes chr2R 19244516 intergenic not near genes chr2R 19244571 intergenic not near genes chr2R_8_19240001 chr2R_19240001 RAL-406 1132 chr2R 19300943 19300995 chr2R 19301046 19301099 20 103 4.0 3.5 3.8 4.2 156 chr2R 19300943 intron Tab2 + chr2R 19301021 intron Tab2 + chr2R 19301099 intron Tab2 + chr2R_20_19300001 chr2R_19300001 RAL-406 1133 chr2R 19385260 19385304 chr2R 19385563 19385607 15 299 8.0 5.5 6.8 1.9 347 chr2R 19385260 intergenic CG10073 + chr2R 19385434 intergenic CG10073 +,CG10081 + chr2R 19385607 intergenic CG10081 + chr2R_15_19385001 chr2R_19385001 RAL-406 1134 chr2R 19715816 19715852 chr2R 19723324 19723345 blood 7 7503 9.0 5.0 7.0 0.9 7529 chr2R 19715816 intergenic not near genes chr2R 19719580 intergenic not near genes chr2R 19723345 intergenic not near genes chr2R_7_19715001 chr2R_19715001 RAL-406 1135 chr2R 19773990 19774040 chr2R 19774123 19774171 25 128 4.5 4.5 4.5 4.5 181 chr2R 19773990 intergenic not near genes chr2R 19774080 intergenic not near genes chr2R 19774171 intergenic not near genes chr2R_25_19770001 chr2R_19770001 RAL-406 1136 chr2R 19776598 19776617 chr2R 19779941 19779960 jockey 5 3343 5.0 15.0 10.0 0.5 3362 chr2R 19776598 intergenic not near genes chr2R 19778279 intergenic not near genes chr2R 19779960 intergenic not near genes chr2R_5_19775001 chr2R_19775001 RAL-406 1137 chr2R 19776618 19776622 chr2R 19779926 19779965 jockey 5 3336 5.0 11.0 8.0 0.6 3347 chr2R 19776618 intergenic not near genes chr2R 19778292 intergenic not near genes chr2R 19779965 intergenic not near genes chr2R_5_19775001 chr2R_19775001 RAL-406 1138 chr2R 19914828 19914876 chr2R 19922260 19922307 mdg1 9 7430 10.0 5.0 7.5 1.1 7479 chr2R 19914828 intergenic not near genes chr2R 19918568 intergenic not near genes chr2R 19922307 intergenic not near genes chr2R_9_19915001 chr2R_19915001 RAL-406 1139 chr2R 19943276 19943293 chr2R 19943381 19943398 9 105 2.5 5.5 4.0 1.8 122 chr2R 19943276 intergenic not near genes chr2R 19943337 intergenic not near genes chr2R 19943398 intergenic not near genes chr2R_9_19940001 chr2R_19940001 RAL-406 1140 chr2R 20069215 20069243 chr2R 20071874 20071901 opus 5 2653 1.0 2.5 1.8 1.8 2686 chr2R 20069215 intergenic not near genes chr2R 20070558 intergenic not near genes chr2R 20071901 intergenic not near genes chr2R_5_20070001 chr2R_20070001 RAL-406 1141 chr2R 20080609 20080624 chr2R 20080691 20080721 8 93 0.5 10.5 5.5 1.2 112 chr2R 20080609 intergenic not near genes chr2R 20080665 intergenic not near genes chr2R 20080721 intergenic not near genes chr2R_8_20080001 chr2R_20080001 RAL-406 1142 chr2R 20125724 20125748 chr2R 20125820 20125844 16 95 5.5 12.5 9.0 1.6 120 chr2R 20125724 intergenic not near genes chr2R 20125784 intergenic not near genes chr2R 20125844 intergenic not near genes chr2R_16_20125001 chr2R_20125001 RAL-406 1143 chr2R 20175989 20176028 chr2R 20176098 20176116 15 104 6.5 3.5 5.0 2.5 127 chr2R 20175989 intergenic not near genes chr2R 20176052 intergenic not near genes chr2R 20176116 intergenic not near genes chr2R_15_20175001 chr2R_20175001 RAL-406 1144 chr2R 20223566 20223615 chr2R 20223679 20223726 4 109 6.0 5.5 5.8 0.6 160 chr2R 20223566 intergenic not near genes chr2R 20223646 intergenic not near genes chr2R 20223726 intergenic not near genes chr2R_4_20220001 chr2R_20220001 RAL-406 1145 chr2R 20434098 20434103 chr2R 20434184 20434198 4 92 0.0 5.0 2.5 1.1 100 chr2R 20434098 intron CG12484 + chr2R 20434148 intron CG12484 + chr2R 20434198 intron CG12484 + chr2R_4_20430001 chr2R_20430001 RAL-406 1146 chr2R 20502276 20502278 chr2R 20502409 20502412 4 134 11.0 9.0 10.0 0.4 136 chr2R 20502276 intergenic not near genes chr2R 20502344 intergenic not near genes chr2R 20502412 intergenic not near genes chr2R_4_20500001 chr2R_20500001 RAL-406 1147 chr2R 20502281 20502316 chr2R 20502405 20502448 18 130 4.0 7.0 5.5 2.8 167 chr2R 20502281 intergenic not near genes chr2R 20502364 intergenic not near genes chr2R 20502448 intergenic not near genes chr2R_18_20500001 chr2R_20500001 RAL-406 1148 chr2R 20523017 20523071 chr2R 20523148 20523185 14 117 1.5 2.0 1.8 5.0 168 chr2R 20523017 intergenic not near genes chr2R 20523101 intergenic not near genes chr2R 20523185 intergenic not near genes chr2R_14_20520001 chr2R_20520001 RAL-406 1149 chr2R 20555343 20555348 chr2R 20555418 20555458 5 101 0.0 0.0 0.0 5.0 115 chr2R 20555343 intergenic not near genes chr2R 20555400 intergenic not near genes chr2R 20555458 intergenic not near genes chr2R_5_20555001 chr2R_20555001 RAL-406 1150 chr2R 20601722 20601731 chr2R 20601821 20601836 8 104 7.0 6.0 6.5 1.1 114 chr2R 20601722 intron bl + chr2R 20601779 intron bl + chr2R 20601836 intron bl + chr2R_8_20600001 chr2R_20600001 RAL-406 1151 chr2R 20601732 20601744 chr2R 20601816 20601849 7 101 3.5 4.5 4.0 1.4 117 chr2R 20601732 intron bl + chr2R 20601790 intron bl + chr2R 20601849 intron bl + chr2R_7_20600001 chr2R_20600001 RAL-406 1152 chr2R 20675914 20675962 chr2R 20676273 20676314 8 350 4.0 4.5 4.2 1.5 400 chr2R 20675914 intergenic not near genes chr2R 20676114 intergenic not near genes chr2R 20676314 intergenic not near genes chr2R_8_20675001 chr2R_20675001 RAL-406 1153 chr2R 20698082 20698133 chr2R 20698218 20698266 21 135 3.5 2.0 2.8 5.5 184 chr2R 20698082 intergenic dpr + chr2R 20698174 intergenic dpr + chr2R 20698266 intergenic dpr + chr2R_21_20695001 chr2R_20695001 RAL-406 1154 chr2R 20714742 20714779 chr2R 20714851 20714888 16 103 7.0 4.5 5.8 2.4 146 chr2R 20714742 intron dpr + chr2R 20714815 intron dpr + chr2R 20714888 intron dpr + chr2R_16_20710001 chr2R_20710001 RAL-406 1155 chr2R 20716017 20716045 chr2R 20716792 20716843 13 783 23.5 55.5 39.5 0.3 826 chr2R 20716017 intron dpr + chr2R 20716430 intron dpr + chr2R 20716843 intron dpr + chr2R_13_20715001 chr2R_20715001 RAL-406 1156 chr2R 20739430 20739447 chr2R 20744218 20744235 F-element 4 4786 6.0 2.0 4.0 0.8 4805 chr2R 20739430 intron dpr + chr2R 20741832 intron dpr + chr2R 20744235 intron dpr + chr2R_4_20740001 chr2R_20740001 RAL-406 1157 chr2R 20739449 20739467 chr2R 20744217 20744254 F-element 5 4775 3.5 1.5 2.5 1.4 4805 chr2R 20739449 intron dpr + chr2R 20741852 intron dpr + chr2R 20744254 intron dpr + chr2R_5_20740001 chr2R_20740001 RAL-406 1158 chr2R 20783292 20783329 chr2R 20788084 20788087 F-element 15 4786 4.0 7.5 5.8 2.2 4795 chr2R 20783292 intergenic not near genes chr2R 20785690 intergenic not near genes chr2R 20788087 intergenic CG43666 - chr2R_15_20785001 chr2R_20785001 RAL-406 1159 chr2R 20833049 20833060 chr2R 20833136 20833163 9 99 1.5 10.0 5.8 1.3 114 chr2R 20833049 intron,intron insc -,sktl - chr2R 20833106 intron,intron insc -,sktl - chr2R 20833163 intron,intron insc -,sktl - chr2R_9_20830001 chr2R_20830001 RAL-406 1160 chr2R 20862316 20862349 chr2R 20862430 20862449 7 103 2.0 7.5 4.8 1.2 133 chr2R 20862316 intergenic not near genes chr2R 20862382 intergenic not near genes chr2R 20862449 intergenic not near genes chr2R_7_20860001 chr2R_20860001 RAL-406 1161 chr2R 20863101 20863130 chr2R 20863207 20863236 4 103 4.5 2.5 3.5 0.9 135 chr2R 20863101 intergenic not near genes chr2R 20863168 intergenic not near genes chr2R 20863236 intergenic not near genes chr2R_4_20860001 chr2R_20860001 RAL-406 1162 chr2R 21107900 21107910 chr2R 21108092 21108127 6 213 3.5 5.0 4.2 1.2 227 chr2R 21107900 intron ktub + chr2R 21108014 intron ktub + chr2R 21108127 intron ktub + chr2R_6_21105001 chr2R_21105001 RAL-406 1163 chr2R 21113462 21113486 chr2R 21113571 21113595 16 108 7.5 4.0 5.8 2.4 133 chr2R 21113462 intron ktub + chr2R 21113528 intron ktub + chr2R 21113595 intron ktub + chr2R_16_21110001 chr2R_21110001 RAL-406 1164 chr2R 21143280 21143309 chr2R 21143395 21143424 17 115 5.5 1.5 3.5 3.8 144 chr2R 21143280 intergenic CG9406 +,Xbp1 + chr2R 21143352 intergenic CG9406 +,Xbp1 + chr2R 21143424 intergenic Xbp1 +,CG9406 + chr2R_17_21140001 chr2R_21140001 RAL-406 1165 chr2R 21151140 21151146 chr2R 21153793 21153799 opus 4 2653 0.5 9.5 5.0 0.7 2659 chr2R 21151140 intron CG30389 - chr2R 21152470 intron CG30389 - chr2R 21153799 intron CG30389 - chr2R_4_21150001 chr2R_21150001 RAL-406 1166 chr2R 21188211 21188249 chr2R 21188307 21188350 9 98 7.0 5.0 6.0 1.3 139 chr2R 21188211 exon tud + chr2R 21188280 intron tud + chr2R 21188350 intron tud + chr2R_9_21185001 chr2R_21185001 RAL-406 1167 chr2R 21285413 21285427 chr2R 21285510 21285524 6 96 16.5 8.0 12.2 0.5 111 chr2R 21285413 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285468 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285524 3` UTR,3` UTR MFS16 +,CG10505 - chr2R_6_21285001 chr2R_21285001 RAL-406 1168 chr2R 21285429 21285434 chr2R 21285509 21285531 4 92 15.5 8.0 11.8 0.3 102 chr2R 21285429 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285480 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285531 3` UTR,3` UTR MFS16 +,CG10505 - chr2R_4_21285001 chr2R_21285001 RAL-406 1169 chr2R 21363117 21363185 chr2R 21363235 21363294 11 112 0.0 0.0 0.0 11.0 177 chr2R 21363117 intron cv-2 - chr2R 21363206 intron cv-2 - chr2R 21363294 intron cv-2 - chr2R_11_21360001 chr2R_21360001 RAL-406 1170 chr2R 21404565 21404612 chr2R 21404662 21404684 9 91 3.5 2.5 3.0 2.2 119 chr2R 21404565 intron Sdc - chr2R 21404624 intron Sdc - chr2R 21404684 intron Sdc - chr2R_9_21400001 chr2R_21400001 RAL-406 1171 chr2R 21437591 21437643 chr2R 21437693 21437727 21 97 4.5 7.0 5.8 3.1 136 chr2R 21437591 intron Sdc - chr2R 21437659 intron Sdc - chr2R 21437727 intron Sdc - chr2R_21_21435001 chr2R_21435001 RAL-406 1172 chr2R 21519429 21519464 chr2R 21519536 21519584 7 109 3.0 6.0 4.5 1.3 155 chr2R 21519429 exon CG30288 - chr2R 21519506 exon CG30288 - chr2R 21519584 exon CG30288 - chr2R_7_21515001 chr2R_21515001 RAL-406 1173 chr2R 21540669 21540695 chr2R 21540907 21540927 11 237 1.0 3.5 2.2 3.4 258 chr2R 21540669 intron Egfr + chr2R 21540798 intron Egfr + chr2R 21540927 intron Egfr + chr2R_11_21540001 chr2R_21540001 RAL-406 1174 chr2R 21700163 21700182 chr2R 21700244 21700288 8 95 4.5 5.0 4.8 1.4 125 chr2R 21700163 intron HmgZ - chr2R 21700226 intron HmgZ - chr2R 21700288 intron HmgZ - chr2R_8_21700001 chr2R_21700001 RAL-406 1175 chr2R 21726681 21726689 chr2R 21726799 21726804 6 118 11.5 0.0 5.8 0.9 123 chr2R 21726681 intergenic not near genes chr2R 21726742 intergenic not near genes chr2R 21726804 intergenic not near genes chr2R_6_21725001 chr2R_21725001 RAL-406 1176 chr2R 21738262 21738308 chr2R 21747442 21747458 roo 5 9159 1.0 2.5 1.8 1.8 9196 chr2R 21738262 intergenic not near genes chr2R 21742860 intergenic not near genes chr2R 21747458 intergenic not near genes chr2R_5_21740001 chr2R_21740001 RAL-406 1177 chr2R 21753069 21753087 chr2R 21753573 21753592 roo 8 502 8.0 7.0 7.5 0.9 523 chr2R 21753069 intergenic not near genes chr2R 21753330 intergenic not near genes chr2R 21753592 intergenic not near genes chr2R_8_21750001 chr2R_21750001 RAL-406 1178 chr2R 21753088 21753117 chr2R 21753569 21753592 roo 17 498 5.5 7.0 6.2 2.4 504 chr2R 21753088 intergenic not near genes chr2R 21753340 intergenic not near genes chr2R 21753592 intergenic not near genes chr2R_17_21750001 chr2R_21750001 RAL-406 1179 chr2R 21769150 21769190 chr2R 21769374 21769425 7 226 4.5 4.0 4.2 1.3 275 chr2R 21769150 exon CG30395 + chr2R 21769288 intron CG30395 + chr2R 21769425 exon CG30395 + chr2R_7_21765001 chr2R_21765001 RAL-406 1180 chr2R 21774753 21774759 chr2R 22652320 22652326 5 877566 25.5 4.5 15.0 0.3 877573 chr2R 21774753 3` UTR CG4021 + chr2R 22213540 intron ari-2 + chr2R 22652326 3` UTR nsr + chr2R_5_22210001 chr2R_22210001 RAL-406 1181 chr2R 21809507 21809557 chr2R 21817762 21817787 roo 20 8253 6.5 7.0 6.8 2.6 8280 chr2R 21809507 intergenic not near genes chr2R 21813647 intergenic not near genes chr2R 21817787 intergenic not near genes chr2R_20_21810001 chr2R_21810001 RAL-406 1182 chr2R 21906258 21906298 chr2R 21906379 21906413 16 120 3.0 6.0 4.5 2.9 155 chr2R 21906258 intron Fili + chr2R 21906336 intron Fili + chr2R 21906413 intron Fili + chr2R_16_21905001 chr2R_21905001 RAL-406 1183 chr2R 21912749 21912773 chr2R 21912840 21912844 8 85 4.5 2.5 3.5 1.8 95 chr2R 21912749 intron Fili + chr2R 21912796 intron Fili + chr2R 21912844 intron Fili + chr2R_8_21910001 chr2R_21910001 RAL-406 1184 chr2R 21932246 21932281 chr2R 21932338 21932366 6 90 2.5 7.0 4.8 1.0 120 chr2R 21932246 intron Fili + chr2R 21932306 intron Fili + chr2R 21932366 intron Fili + chr2R_6_21930001 chr2R_21930001 RAL-406 1185 chr2R 21963176 21963213 chr2R 21963281 21963313 11 103 4.0 2.0 3.0 2.8 137 chr2R 21963176 intergenic not near genes chr2R 21963244 intergenic not near genes chr2R 21963313 intergenic not near genes chr2R_11_21960001 chr2R_21960001 RAL-406 1186 chr2R 22004281 22004319 chr2R 22004390 22004423 13 108 7.0 0.0 3.5 2.9 142 chr2R 22004281 intron CG34370 - chr2R 22004352 intron CG34370 - chr2R 22004423 intron CG34370 - chr2R_13_22000001 chr2R_22000001 RAL-406 1187 chr2R 22118401 22118451 chr2R 22118499 22118549 24 96 3.0 3.5 3.2 5.7 148 chr2R 22118401 intron Vrp1 - chr2R 22118475 intron Vrp1 - chr2R 22118549 intron Vrp1 - chr2R_24_22115001 chr2R_22115001 RAL-406 1188 chr2R 22124287 22124290 chr2R 22124396 22124399 4 109 13.5 3.0 8.2 0.4 112 chr2R 22124287 3` UTR mei-S332 + chr2R 22124343 3` UTR mei-S332 + chr2R 22124399 intergenic mei-S332 +,GM130 - chr2R_4_22120001 chr2R_22120001 RAL-406 1189 chr2R 22124300 22124341 chr2R 22124395 22124439 12 104 5.5 3.0 4.2 2.3 139 chr2R 22124300 3` UTR mei-S332 + chr2R 22124370 intergenic mei-S332 +,GM130 - chr2R 22124439 intergenic mei-S332 +,GM130 - chr2R_12_22120001 chr2R_22120001 RAL-406 1190 chr2R 22132277 22132284 chr2R 22132377 22132384 6 100 6.5 6.5 6.5 0.8 107 chr2R 22132277 intergenic not near genes chr2R 22132330 intergenic not near genes chr2R 22132384 intergenic not near genes chr2R_6_22130001 chr2R_22130001 RAL-406 1191 chr2R 22185671 22185705 chr2R 22185790 22185814 11 117 5.0 1.5 3.2 2.6 143 chr2R 22185671 3` UTR MED16 + chr2R 22185742 3` UTR MED16 + chr2R 22185814 3` UTR MED16 + chr2R_11_22185001 chr2R_22185001 RAL-406 1192 chr2R 22290062 22290070 chr2R 22290166 22290174 5 102 14.0 8.5 11.2 0.4 112 chr2R 22290062 intergenic not near genes chr2R 22290118 intergenic not near genes chr2R 22290174 intergenic not near genes chr2R_5_22290001 chr2R_22290001 RAL-406 1193 chr2R 22290075 22290082 chr2R 22290165 22290186 5 101 12.0 8.0 10.0 0.5 111 chr2R 22290075 intergenic not near genes chr2R 22290130 intergenic not near genes chr2R 22290186 intergenic not near genes chr2R_5_22290001 chr2R_22290001 RAL-406 1194 chr2R 22290084 22290089 chr2R 22290163 22290187 4 96 10.5 7.5 9.0 0.4 103 chr2R 22290084 intergenic not near genes chr2R 22290136 intergenic not near genes chr2R 22290187 intergenic not near genes chr2R_4_22290001 chr2R_22290001 RAL-406 1195 chr2R 22297707 22297736 chr2R 22297787 22297832 10 93 0.0 3.5 1.8 3.6 125 chr2R 22297707 intergenic not near genes chr2R 22297770 intergenic wdp - chr2R 22297832 intergenic wdp - chr2R_10_22295001 chr2R_22295001 RAL-406 1196 chr2R 22349690 22349720 chr2R 22351481 22351524 jockey 7 1800 5.5 6.0 5.8 1.0 1834 chr2R 22349690 intron Liprin-gamma - chr2R 22350607 intron Liprin-gamma - chr2R 22351524 intron Liprin-gamma - chr2R_7_22350001 chr2R_22350001 RAL-406 1197 chr2R 22360368 22360375 chr2R 22360821 22360828 jockey 5 453 12.5 3.0 7.8 0.6 460 chr2R 22360368 intron Liprin-gamma - chr2R 22360598 intron Liprin-gamma - chr2R 22360828 intron Liprin-gamma - chr2R_5_22360001 chr2R_22360001 RAL-406 1198 chr2R 22380342 22380393 chr2R 22380453 22380494 8 109 3.0 0.5 1.8 2.9 152 chr2R 22380342 intron wrapper + chr2R 22380418 intron wrapper + chr2R 22380494 intron wrapper + chr2R_8_22380001 chr2R_22380001 RAL-406 1199 chr2R 22420493 22420507 chr2R 22420591 22420605 4 98 9.0 0.0 4.5 0.7 112 chr2R 22420493 intergenic mRpS29 - chr2R 22420549 intergenic mRpS29 -,rad50 + chr2R 22420605 intergenic mRpS29 -,rad50 + chr2R_4_22420001 chr2R_22420001 RAL-406 1200 chr2R 22525750 22525755 chr2R 22529329 22529334 jockey 4 3579 5.5 2.5 4.0 0.8 3584 chr2R 22525750 intron px - chr2R 22527542 intron px - chr2R 22529334 intron px - chr2R_4_22525001 chr2R_22525001 RAL-406 1201 chr2R 22541843 22541880 chr2R 22541962 22541994 13 115 7.0 3.5 5.2 2.1 151 chr2R 22541843 intron px - chr2R 22541918 intron px - chr2R 22541994 intron px - chr2R_13_22540001 chr2R_22540001 RAL-406 1202 chr2R 22560668 22560675 chr2R 22560762 22560762 5 93 5.5 7.5 6.5 0.7 94 chr2R 22560668 intron px - chr2R 22560715 intron px - chr2R 22560762 5` UTR px - chr2R_5_22560001 chr2R_22560001 RAL-406 1203 chr2R 22560677 22560684 chr2R 22560742 22560777 4 81 3.5 6.0 4.8 0.7 100 chr2R 22560677 intron px - chr2R 22560727 intron px - chr2R 22560777 5` UTR px - chr2R_4_22560001 chr2R_22560001 RAL-406 1204 chr2R 22620813 22620857 chr2R 22620933 22620977 7 115 2.5 2.0 2.2 2.2 164 chr2R 22620813 5` UTR CG33143 + chr2R 22620895 5` UTR CG33143 + chr2R 22620977 5` UTR CG33143 + chr2R_7_22620001 chr2R_22620001 RAL-406 1205 chr2R 22623437 22623485 chr2R 22623591 22623618 7 153 7.0 4.0 5.5 1.1 181 chr2R 22623437 intron CG33143 + chr2R 22623528 intron CG33143 + chr2R 22623618 intron CG33143 + chr2R_7_22620001 chr2R_22620001 RAL-406 1206 chr2R 22641687 22641717 chr2R 22641797 22641827 23 109 7.5 11.5 9.5 2.2 140 chr2R 22641687 intergenic Ugt58Fa -,RpS24 - chr2R 22641757 intergenic Ugt58Fa -,RpS24 - chr2R 22641827 3` UTR Ugt58Fa - chr2R_23_22640001 chr2R_22640001 RAL-406 1207 chr2R 22664915 22664964 chr2R 22665015 22665064 19 100 5.5 9.0 7.2 2.3 149 chr2R 22664915 intergenic CG4250 + chr2R 22664990 intergenic not near genes chr2R 22665064 intergenic not near genes chr2R_19_22660001 chr2R_22660001 RAL-406 1208 chr2R 22767550 22767596 chr2R 22767655 22767701 12 103 4.5 3.0 3.8 2.5 151 chr2R 22767550 intron CG42260 - chr2R 22767626 intron CG42260 - chr2R 22767701 intron CG42260 - chr2R_12_22765001 chr2R_22765001 RAL-406 1209 chr2R 22774946 22774954 chr2R 22775385 22775393 jockey 4 439 17.5 6.5 12.0 0.3 447 chr2R 22774946 intron CG42260 - chr2R 22775170 intron CG42260 - chr2R 22775393 intron CG42260 - chr2R_4_22775001 chr2R_22775001 RAL-406 1210 chr2R 22774962 22775000 chr2R 22775380 22775439 jockey 21 433 7.0 4.5 5.8 3.1 477 chr2R 22774962 intron CG42260 - chr2R 22775200 intron CG42260 - chr2R 22775439 intron CG42260 - chr2R_21_22775001 chr2R_22775001 RAL-406 1211 chr2R 22779284 22779312 chr2R 22781985 22782003 4 2694 36.5 26.0 31.2 0.1 2719 chr2R 22779284 intron CG42260 - chr2R 22780644 intron CG42260 - chr2R 22782003 intron CG42260 - chr2R_4_22780001 chr2R_22780001 RAL-406 1212 chr2R 22843010 22843049 chr2R 22844992 22845031 flea 15 1981 10.5 13.5 12.0 1.2 2021 chr2R 22843010 intergenic CG9826 + chr2R 22844020 intergenic not near genes chr2R 22845031 intergenic not near genes chr2R_15_22840001 chr2R_22840001 RAL-406 1213 chr2R 22873611 22873659 chr2R 22873707 22873755 14 95 5.5 0.5 3.0 3.5 144 chr2R 22873611 exon CG13532 + chr2R 22873683 intron CG13532 + chr2R 22873755 intron CG13532 + chr2R_14_22870001 chr2R_22870001 RAL-406 1214 chr2R 22925326 22925337 chr2R 22925442 22925453 4 114 6.5 4.5 5.5 0.6 127 chr2R 22925326 5` UTR CG42678 + chr2R 22925390 5` UTR CG42678 + chr2R 22925453 5` UTR CG42678 + chr2R_4_22925001 chr2R_22925001 RAL-406 1215 chr2R 22925339 22925376 chr2R 22925441 22925492 7 110 3.0 4.0 3.5 1.6 153 chr2R 22925339 5` UTR CG42678 + chr2R 22925416 5` UTR CG42678 + chr2R 22925492 5` UTR CG42678 + chr2R_7_22925001 chr2R_22925001 RAL-406 1216 chr2R 22971514 22971528 chr2R 22971590 22971627 4 89 1.0 6.5 3.8 0.8 113 chr2R 22971514 intergenic not near genes chr2R 22971570 intergenic not near genes chr2R 22971627 intergenic not near genes chr2R_4_22970001 chr2R_22970001 RAL-406 1217 chr2R 23000142 23000165 chr2R 23000231 23000265 5 101 9.0 13.0 11.0 0.4 123 chr2R 23000142 intron twi + chr2R 23000204 intron twi + chr2R 23000265 intron twi + chr2R_5_23000001 chr2R_23000001 RAL-406 1218 chr2R 23061754 23061779 chr2R 23061868 23061888 5 109 9.0 5.5 7.2 0.6 134 chr2R 23061754 3` UTR l(2)06496 - chr2R 23061821 3` UTR l(2)06496 - chr2R 23061888 3` UTR l(2)06496 - chr2R_5_23060001 chr2R_23060001 RAL-406 1219 chr2R 23175043 23175063 chr2R 23175115 23175143 6 81 5.0 2.0 3.5 1.3 100 chr2R 23175043 intron CG34371 - chr2R 23175093 intron CG34371 - chr2R 23175143 intron CG34371 - chr2R_6_23175001 chr2R_23175001 RAL-406 1220 chr2R 23184290 23184297 chr2R 23184350 23184402 4 90 0.0 4.5 2.2 1.2 112 chr2R 23184290 intron,intron CG34371 -,CG13539 + chr2R 23184346 intron,intron CG34371 -,CG13539 + chr2R 23184402 intron,intron CG34371 -,CG13539 + chr2R_4_23180001 chr2R_23180001 RAL-406 1221 chr2R 23190008 23190018 chr2R 23190108 23190118 8 100 13.5 0.0 6.8 1.0 110 chr2R 23190008 intron CG34371 - chr2R 23190063 intron CG34371 - chr2R 23190118 intron CG34371 - chr2R_8_23190001 chr2R_23190001 RAL-406 1222 chr2R 23218994 23219027 chr2R 23219245 23219266 14 249 5.5 0.0 2.8 3.7 272 chr2R 23218994 intergenic not near genes chr2R 23219130 intergenic not near genes chr2R 23219266 intergenic not near genes chr2R_14_23215001 chr2R_23215001 RAL-406 1223 chr2R 23257508 23257528 chr2R 23257601 23257631 8 100 1.0 5.0 3.0 2.0 123 chr2R 23257508 intergenic not near genes chr2R 23257570 intergenic not near genes chr2R 23257631 intergenic not near genes chr2R_8_23255001 chr2R_23255001 RAL-406 1224 chr2R 23346528 23346556 chr2R 23346611 23346652 13 95 3.5 7.5 5.5 2.0 124 chr2R 23346528 intron CG3502 - chr2R 23346590 intron CG3502 - chr2R 23346652 intron,5` UTR CG3502 -,CG9863 + chr2R_13_23345001 chr2R_23345001 RAL-406 1225 chr2R 23402601 23402639 chr2R 23407688 23407735 flea 15 5093 10.0 9.0 9.5 1.4 5134 chr2R 23402601 intergenic CG3520 - chr2R 23405168 intergenic not near genes chr2R 23407735 intergenic not near genes chr2R_15_23405001 chr2R_23405001 RAL-406 1226 chr2R 23421361 23421373 chr2R 23421457 23421483 5 106 4.0 9.0 6.5 0.7 122 chr2R 23421361 intergenic CG9815 - chr2R 23421422 intergenic CG9815 - chr2R 23421483 intergenic CG9815 - chr2R_5_23420001 chr2R_23420001 RAL-406 1227 chr2R 23421374 23421386 chr2R 23421449 23421485 6 102 2.5 6.0 4.2 1.2 111 chr2R 23421374 intergenic CG9815 - chr2R 23421430 intergenic CG9815 - chr2R 23421485 intergenic CG9815 - chr2R_6_23420001 chr2R_23420001 RAL-406 1228 chr2R 23423719 23423774 chr2R 23423897 23423952 24 174 2.5 5.5 4.0 4.8 233 chr2R 23423719 intron CG9815 - chr2R 23423836 intron CG9815 - chr2R 23423952 intron CG9815 - chr2R_24_23420001 chr2R_23420001 RAL-406 1229 chr2R 23437222 23437244 chr2R 23437309 23437326 4 81 1.0 2.5 1.8 1.4 104 chr2R 23437222 intergenic not near genes chr2R 23437274 intergenic not near genes chr2R 23437326 intergenic not near genes chr2R_4_23435001 chr2R_23435001 RAL-406 1230 chr2R 23452638 23452684 chr2R 23453657 23453703 22 1015 4.0 5.0 4.5 4.0 1065 chr2R 23452638 intron CG43795 + chr2R 23453170 intron CG43795 + chr2R 23453703 intron CG43795 + chr2R_22_23450001 chr2R_23450001 RAL-406 1231 chr2R 23493698 23493698 chr2R 23493762 23493767 4 66 4.0 6.0 5.0 0.7 69 chr2R 23493698 intergenic not near genes chr2R 23493732 intergenic not near genes chr2R 23493767 intergenic not near genes chr2R_4_23490001 chr2R_23490001 RAL-406 1232 chr2R 23508904 23508942 chr2R 23509041 23509079 14 137 9.0 6.0 7.5 1.6 175 chr2R 23508904 intergenic not near genes chr2R 23508992 intergenic not near genes chr2R 23509079 intergenic not near genes chr2R_14_23505001 chr2R_23505001 RAL-406 1233 chr2R 23546541 23546583 chr2R 23546750 23546777 8 203 4.0 8.5 6.2 1.1 236 chr2R 23546541 intron wmd - chr2R 23546659 intron wmd - chr2R 23546777 intron wmd - chr2R_8_23545001 chr2R_23545001 RAL-406 1234 chr2R 23653965 23654004 chr2R 23654051 23654101 13 87 5.0 1.0 3.0 3.2 136 chr2R 23653965 3` UTR retn + chr2R 23654033 3` UTR retn + chr2R 23654101 3` UTR retn + chr2R_13_23650001 chr2R_23650001 RAL-406 1235 chr2R 23784458 23784506 chr2R 23784556 23784574 13 96 5.5 5.5 5.5 2.0 116 chr2R 23784458 intron CG9850 - chr2R 23784516 intron CG9850 - chr2R 23784574 intron CG9850 - chr2R_13_23780001 chr2R_23780001 RAL-406 1236 chr2R 23799223 23799251 chr2R 23799309 23799338 9 94 4.0 4.5 4.2 1.7 115 chr2R 23799223 intergenic not near genes chr2R 23799280 intergenic not near genes chr2R 23799338 intergenic not near genes chr2R_9_23795001 chr2R_23795001 RAL-406 1237 chr2R 23914280 23914331 chr2R 23921921 23921944 412 20 7628 2.5 2.0 2.2 6.2 7664 chr2R 23914280 exon kcc + chr2R 23918112 intron kcc + chr2R 23921944 intron kcc + chr2R_20_23915001 chr2R_23915001 RAL-406 1238 chr2R 23986493 23986549 chr2R 23986593 23986628 25 92 6.0 5.5 5.8 3.7 135 chr2R 23986493 intron Phm - chr2R 23986560 intron Phm - chr2R 23986628 intron,5` UTR Phm -,CG30178 + chr2R_25_23985001 chr2R_23985001 RAL-406 1239 chr2R 24031362 24031413 chr2R 24031466 24031517 26 98 3.5 7.5 5.5 4.0 155 chr2R 24031362 5` UTR CG30172 - chr2R 24031440 intergenic CG30172 -,Chi - chr2R 24031517 intergenic Chi -,CG30172 - chr2R_26_24030001 chr2R_24030001 RAL-406 1240 chr2R 24082651 24082705 chr2R 24082781 24082790 15 123 3.0 5.0 4.0 3.0 139 chr2R 24082651 intron CG16786 + chr2R 24082720 intron CG16786 + chr2R 24082790 intron CG16786 + chr2R_15_24080001 chr2R_24080001 RAL-406 1241 chr2R 24147059 24147096 chr2R 24154647 24154648 412 4 7574 1.0 3.0 2.0 1.3 7589 chr2R 24147059 intron Dat + chr2R 24150854 intron Dat + chr2R 24154648 intron Dat + chr2R_4_24150001 chr2R_24150001 RAL-406 1242 chr2R 24177214 24177261 chr2R 24184719 24184746 412 24 7500 10.5 3.0 6.8 3.1 7532 chr2R 24177214 3` UTR Nop60B + chr2R 24180980 intron Nop60B + chr2R 24184746 3` UTR Nop60B + chr2R_24_24180001 chr2R_24180001 RAL-406 1243 chr2R 24320176 24320203 chr2R 24320268 24320280 6 88 2.5 5.0 3.8 1.2 104 chr2R 24320176 intergenic not near genes chr2R 24320228 intergenic not near genes chr2R 24320280 intergenic not near genes chr2R_6_24320001 chr2R_24320001 RAL-406 1244 chr2R 24353408 24353452 chr2R 24361790 24361823 roo 4 8378 5.5 0.5 3.0 1.0 8415 chr2R 24353408 intron,intron bs +,CR44811 - chr2R 24357616 intron,intron bs +,CR44811 - chr2R 24361823 intron,intron bs +,CR44811 - chr2R_4_24355001 chr2R_24355001 RAL-406 1245 chr2R 24430790 24430837 chr2R 24430891 24430938 24 100 7.5 7.0 7.2 2.9 148 chr2R 24430790 intergenic CG15873 - chr2R 24430864 intergenic CG15873 -,Pgam5-2 - chr2R 24430938 intergenic CG15873 -,Pgam5-2 - chr2R_24_24430001 chr2R_24430001 RAL-406 1246 chr2R 24513810 24513843 chr2R 24513891 24513933 9 84 1.5 3.0 2.2 2.8 123 chr2R 24513810 intron Letm1 - chr2R 24513872 intron Letm1 - chr2R 24513933 intron Letm1 - chr2R_9_24510001 chr2R_24510001 RAL-406 1247 chr2R 24584342 24584364 chr2R 24584424 24584466 7 91 5.0 2.0 3.5 1.6 124 chr2R 24584342 intron pio + chr2R 24584404 intron pio + chr2R 24584466 intron pio + chr2R_7_24580001 chr2R_24580001 RAL-406 1248 chr2R 24859840 24859871 chr2R 24859929 24859942 7 87 2.5 2.5 2.5 2.0 102 chr2R 24859840 5` UTR CR44829 + chr2R 24859891 5` UTR CR44829 + chr2R 24859942 5` UTR CR44829 + chr2R_7_24855001 chr2R_24855001 RAL-406 1249 chr2R 24884030 24884078 chr2R 24884132 24884180 11 100 5.0 5.0 5.0 1.8 150 chr2R 24884030 intron NKAIN + chr2R 24884105 intron NKAIN + chr2R 24884180 intron NKAIN + chr2R_11_24880001 chr2R_24880001 RAL-406 1250 chr2R 25022628 25022672 chr2R 25022727 25022775 18 100 5.5 7.5 6.5 2.4 147 chr2R 25022628 intron uzip + chr2R 25022702 intron uzip + chr2R 25022775 intron uzip + chr2R_18_25020001 chr2R_25020001 RAL-406 1251 chr2R 25061333 25061362 chr2R 25061419 25061465 7 88 5.0 1.5 3.2 1.7 132 chr2R 25061333 intergenic not near genes chr2R 25061399 intergenic not near genes chr2R 25061465 intergenic gsb + chr2R_7_25060001 chr2R_25060001 RAL-406 1252 chr2R 25076181 25076185 chr2R 25076500 25076504 4 319 22.0 20.0 21.0 0.2 323 chr2R 25076181 intron gol - chr2R 25076342 intron gol - chr2R 25076504 intron gol - chr2R_4_25075001 chr2R_25075001 RAL-406 1253 chr2R 25081622 25081636 chr2R 25082709 25082717 4 1100 3.0 6.5 4.8 0.7 1095 chr2R 25081622 intron gol - chr2R 25082170 intron gol - chr2R 25082717 intron gol - chr2R_4_25080001 chr2R_25080001 RAL-406 1254 chr2R 25101265 25101305 chr2R 25101380 25101392 7 114 5.5 2.0 3.8 1.5 127 chr2R 25101265 intron lov - chr2R 25101328 intron lov - chr2R 25101392 intron lov - chr2R_7_25100001 chr2R_25100001 RAL-406 1255 chr2R 25141633 25141681 chr2R 25159342 25159391 roo 26 17707 6.5 6.5 6.5 3.5 17758 chr2R 25141633 intergenic not near genes chr2R 25150512 intergenic not near genes chr2R 25159391 intergenic not near genes chr2R_26_25150001 chr2R_25150001 RAL-406 1256 chr2R 25234748 25234798 chr2R 25234848 25234888 17 94 2.5 4.0 3.2 4.0 140 chr2R 25234748 intron CG9380 - chr2R 25234818 intron CG9380 - chr2R 25234888 intron CG9380 - chr2R_17_25230001 chr2R_25230001 RAL-406 1257 chr2R 25251838 25251847 chr2R 25253129 25253138 INE-1 4 1291 35.5 60.5 48.0 0.1 1300 chr2R 25251838 intron CG9380 - chr2R 25252488 intron,intron CG9380 -,CG30428 + chr2R 25253138 intron,intron CG9380 -,CG30428 + chr2R_4_25250001 chr2R_25250001 RAL-406 1258 chr2R 25251817 25251866 chr2R 25253139 25253157 INE-1 10 1295 38.5 56.5 47.5 0.2 1340 chr2R 25251817 intron CG9380 - chr2R 25252487 intron,intron CG9380 -,CG30428 + chr2R 25253157 intron,intron CG9380 -,CG30428 + chr2R_10_25250001 chr2R_25250001 RAL-406 1259 chr3L 110193 110196 chr3L 119380 119383 roo 5 9187 18.5 6.0 12.2 0.4 9190 chr3L 110193 intergenic not near genes chr3L 114788 intergenic not near genes chr3L 119383 intergenic not near genes chr3L_5_110001 chr3L_110001 RAL-406 1260 chr3L 110197 110242 chr3L 119377 119409 roo 22 9180 7.5 5.0 6.2 3.1 9212 chr3L 110197 intergenic not near genes chr3L 114803 intergenic not near genes chr3L 119409 intergenic not near genes chr3L_22_110001 chr3L_110001 RAL-406 1261 chr3L 162156 162208 chr3L 162254 162306 17 95 7.0 6.5 6.8 2.2 150 chr3L 162156 intron p130CAS + chr3L 162231 intron p130CAS + chr3L 162306 intron p130CAS + chr3L_17_160001 chr3L_160001 RAL-406 1262 chr3L 285121 285142 chr3L 285262 285304 5 146 4.5 7.0 5.8 0.7 183 chr3L 285121 intron RhoGEF3 + chr3L 285212 intron RhoGEF3 + chr3L 285304 intron RhoGEF3 + chr3L_5_285001 chr3L_285001 RAL-406 1263 chr3L 296048 296087 chr3L 296387 296389 11 331 4.5 6.0 5.2 1.8 341 chr3L 296048 intron RhoGEF3 + chr3L 296218 intron RhoGEF3 + chr3L 296389 intron RhoGEF3 + chr3L_11_295001 chr3L_295001 RAL-406 1264 chr3L 402669 402717 chr3L 409742 409790 297 13 7065 2.0 6.0 4.0 2.6 7121 chr3L 402669 intergenic not near genes chr3L 406230 intergenic not near genes chr3L 409790 intergenic not near genes chr3L_13_405001 chr3L_405001 RAL-406 1265 chr3L 421036 421079 chr3L 421152 421195 10 114 5.5 3.5 4.5 1.8 159 chr3L 421036 intergenic not near genes chr3L 421116 intergenic not near genes chr3L 421195 intergenic not near genes chr3L_10_420001 chr3L_420001 RAL-406 1266 chr3L 514774 514790 chr3L 514883 514892 9 107 13.5 4.0 8.8 0.9 118 chr3L 514774 intron klar - chr3L 514833 intron klar - chr3L 514892 intron klar - chr3L_9_510001 chr3L_510001 RAL-406 1267 chr3L 514793 514963 chr3L 514882 515065 41 96 6.0 4.0 5.0 6.8 272 chr3L 514793 intron klar - chr3L 514929 intron klar - chr3L 515065 intron klar - chr3L_41_510001 chr3L_510001 RAL-406 1268 chr3L 524742 524777 chr3L 524827 524869 15 99 0.0 4.5 2.2 4.7 127 chr3L 524742 intron klar - chr3L 524806 intron klar - chr3L 524869 intron klar - chr3L_15_520001 chr3L_520001 RAL-406 1269 chr3L 536666 536693 chr3L 536782 536810 9 117 6.5 3.0 4.8 1.6 144 chr3L 536666 intron klar - chr3L 536738 intron klar - chr3L 536810 intron klar - chr3L_9_535001 chr3L_535001 RAL-406 1270 chr3L 592945 592968 chr3L 593041 593064 11 95 5.5 8.0 6.8 1.4 119 chr3L 592945 intergenic MED14 + chr3L 593004 intergenic MED14 + chr3L 593064 intergenic MED14 + chr3L_11_590001 chr3L_590001 RAL-406 1271 chr3L 606872 606922 chr3L 606968 607021 11 97 4.0 1.5 2.8 2.9 149 chr3L 606872 intergenic Reg-2 - chr3L 606946 intergenic Reg-2 - chr3L 607021 intergenic Reg-2 - chr3L_11_605001 chr3L_605001 RAL-406 1272 chr3L 642457 642499 chr3L 642562 642610 14 108 4.5 8.0 6.2 1.9 153 chr3L 642457 5` UTR CR43334 + chr3L 642534 5` UTR CR43334 + chr3L 642610 5` UTR CR43334 + chr3L_14_640001 chr3L_640001 RAL-406 1273 chr3L 651375 651391 chr3L 651483 651499 4 104 8.5 7.5 8.0 0.4 124 chr3L 651375 intergenic Gale +,CG3402 - chr3L 651437 intergenic CG3402 -,Gale + chr3L 651499 intergenic CG3402 -,Gale + chr3L_4_650001 chr3L_650001 RAL-406 1274 chr3L 651396 651423 chr3L 651474 651520 14 93 3.5 5.5 4.5 2.5 124 chr3L 651396 intergenic Gale +,CG3402 - chr3L 651458 intergenic CG3402 -,Gale + chr3L 651520 intergenic CG3402 -,Gale + chr3L_14_650001 chr3L_650001 RAL-406 1275 chr3L 789893 789945 chr3L 790398 790450 roo 25 504 7.5 6.5 7.0 3.1 557 chr3L 789893 intergenic not near genes chr3L 790172 intergenic not near genes chr3L 790450 intergenic not near genes chr3L_25_790001 chr3L_790001 RAL-406 1276 chr3L 814626 814663 chr3L 814722 814759 8 90 6.5 4.0 5.2 1.3 133 chr3L 814626 intergenic CR44537 + chr3L 814692 intergenic CR44537 + chr3L 814759 intergenic CR44537 + chr3L_8_810001 chr3L_810001 RAL-406 1277 chr3L 822082 822094 chr3L 822165 822194 5 92 0.0 10.0 5.0 0.8 112 chr3L 822082 intergenic not near genes chr3L 822138 intergenic not near genes chr3L 822194 intergenic not near genes chr3L_5_820001 chr3L_820001 RAL-406 1278 chr3L 832584 832626 chr3L 832682 832726 13 99 6.5 0.0 3.2 3.1 142 chr3L 832584 intron,3` UTR CG13900 -,snoRNA:Psi28S-3308 - chr3L 832655 intron CG13900 - chr3L 832726 exon CG13900 - chr3L_13_830001 chr3L_830001 RAL-406 1279 chr3L 899997 900013 chr3L 900101 900117 6 104 0.0 11.5 5.8 0.9 120 chr3L 899997 intergenic not near genes chr3L 900057 intergenic not near genes chr3L 900117 intergenic not near genes chr3L_6_900001 chr3L_900001 RAL-406 1280 chr3L 900015 900020 chr3L 900088 900124 4 96 0.0 8.5 4.2 0.8 109 chr3L 900015 intergenic not near genes chr3L 900070 intergenic not near genes chr3L 900124 intergenic not near genes chr3L_4_900001 chr3L_900001 RAL-406 1281 chr3L 925156 925201 chr3L 932602 932647 mdg1 30 7440 3.5 7.5 5.5 4.6 7491 chr3L 925156 intron Glut1 + chr3L 928902 intron Glut1 + chr3L 932647 intron Glut1 + chr3L_30_925001 chr3L_925001 RAL-406 1282 chr3L 933907 933913 chr3L 934030 934036 4 123 10.5 8.0 9.2 0.4 129 chr3L 933907 intron Glut1 + chr3L 933972 intron Glut1 + chr3L 934036 intron Glut1 + chr3L_4_930001 chr3L_930001 RAL-406 1283 chr3L 933918 933944 chr3L 934029 934067 14 119 4.0 8.0 6.0 2.0 149 chr3L 933918 intron Glut1 + chr3L 933992 intron Glut1 + chr3L 934067 intron Glut1 + chr3L_14_930001 chr3L_930001 RAL-406 1284 chr3L 939768 939796 chr3L 940892 940902 jockey 7 1124 2.5 8.5 5.5 1.1 1134 chr3L 939768 intron Glut1 + chr3L 940335 intron Glut1 + chr3L 940902 intron Glut1 + chr3L_7_940001 chr3L_940001 RAL-406 1285 chr3L 949895 949907 chr3L 949994 950006 6 99 2.5 0.5 1.5 2.4 111 chr3L 949895 intron Glut1 + chr3L 949950 intron Glut1 + chr3L 950006 intron Glut1 + chr3L_6_945001 chr3L_945001 RAL-406 1286 chr3L 961000 961042 chr3L 961113 961155 20 112 5.0 4.5 4.8 3.4 155 chr3L 961000 intron Glut1 + chr3L 961078 intron Glut1 + chr3L 961155 intron Glut1 + chr3L_20_960001 chr3L_960001 RAL-406 1287 chr3L 1008485 1008532 chr3L 1008581 1008628 15 95 7.0 5.0 6.0 2.1 143 chr3L 1008485 intron trio - chr3L 1008556 intron trio - chr3L 1008628 intron trio - chr3L_15_1005001 chr3L_1005001 RAL-406 1288 chr3L 1021354 1021408 chr3L 1021454 1021483 12 92 2.5 6.0 4.2 2.3 129 chr3L 1021354 intron trio - chr3L 1021418 intron trio - chr3L 1021483 intron trio - chr3L_12_1020001 chr3L_1020001 RAL-406 1289 chr3L 1033316 1033348 chr3L 1033443 1033464 5 120 0.5 0.0 0.2 4.2 148 chr3L 1033316 intron trio - chr3L 1033390 intron trio - chr3L 1033464 intron trio - chr3L_5_1030001 chr3L_1030001 RAL-406 1290 chr3L 1145233 1145248 chr3L 1145332 1145347 4 98 8.0 0.0 4.0 0.8 114 chr3L 1145233 intron bab2 - chr3L 1145290 intron bab2 - chr3L 1145347 intron bab2 - chr3L_4_1145001 chr3L_1145001 RAL-406 1291 chr3L 1154119 1154133 chr3L 1163289 1163303 roo 7 9169 9.5 4.5 7.0 0.9 9184 chr3L 1154119 intron bab2 - chr3L 1158711 intron bab2 - chr3L 1163303 intron bab2 - chr3L_7_1155001 chr3L_1155001 RAL-406 1292 chr3L 1154136 1154158 chr3L 1163279 1163313 roo 6 9160 4.5 2.0 3.2 1.4 9177 chr3L 1154136 intron bab2 - chr3L 1158724 intron bab2 - chr3L 1163313 intron bab2 - chr3L_6_1155001 chr3L_1155001 RAL-406 1293 chr3L 1219597 1219625 chr3L 1227328 1227353 412 8 7735 1.0 3.5 2.2 2.5 7756 chr3L 1219597 intron mwh + chr3L 1223475 intron mwh + chr3L 1227353 intron mwh + chr3L_8_1220001 chr3L_1220001 RAL-406 1294 chr3L 1228226 1228278 chr3L 1228328 1228380 11 95 4.0 1.0 2.5 3.1 154 chr3L 1228226 intron,3` UTR mwh +,LysS + chr3L 1228303 intron mwh + chr3L 1228380 intron mwh + chr3L_11_1225001 chr3L_1225001 RAL-406 1295 chr3L 1347138 1347189 chr3L 1347242 1347273 5 91 3.0 2.5 2.8 1.3 135 chr3L 1347138 intron Ptp61F - chr3L 1347206 intron Ptp61F - chr3L 1347273 intron Ptp61F - chr3L_5_1345001 chr3L_1345001 RAL-406 1296 chr3L 1374435 1374467 chr3L 1374506 1374519 5 68 5.0 6.0 5.5 0.8 84 chr3L 1374435 intron,intron Ptp61F -,ru + chr3L 1374477 intron,intron Ptp61F -,ru + chr3L 1374519 intron,intron Ptp61F -,ru + chr3L_5_1370001 chr3L_1370001 RAL-406 1297 chr3L 1396718 1396752 chr3L 1396822 1396852 7 100 30.0 27.5 28.8 0.2 134 chr3L 1396718 intron Ptp61F - chr3L 1396785 intron Ptp61F - chr3L 1396852 intron Ptp61F - chr3L_7_1395001 chr3L_1395001 RAL-406 1298 chr3L 1415764 1415807 chr3L 1415866 1415877 9 89 1.0 6.5 3.8 1.9 113 chr3L 1415764 intron Ptp61F - chr3L 1415820 intron Ptp61F - chr3L 1415877 intron Ptp61F - chr3L_9_1415001 chr3L_1415001 RAL-406 1299 chr3L 1501975 1502020 chr3L 1502076 1502121 5 95 1.0 0.5 0.8 2.8 146 chr3L 1501975 intron pUf68 - chr3L 1502048 intron pUf68 - chr3L 1502121 intron pUf68 - chr3L_5_1500001 chr3L_1500001 RAL-406 1300 chr3L 1506001 1506032 chr3L 1513592 1513629 17.6 15 7611 5.5 3.0 4.2 2.9 7628 chr3L 1506001 intron,intron Psa +,cue - chr3L 1509815 intron,intron Psa +,cue - chr3L 1513629 intron,intron Psa +,cue - chr3L_15_1505001 chr3L_1505001 RAL-406 1301 chr3L 1674337 1674355 chr3L 1674413 1674422 6 84 2.0 2.0 2.0 2.0 85 chr3L 1674337 intergenic CG7991 + chr3L 1674380 intergenic CG7991 + chr3L 1674422 intergenic CG7991 + chr3L_6_1670001 chr3L_1670001 RAL-406 1302 chr3L 1740841 1740882 chr3L 1741104 1741144 pogo 15 251 6.0 6.0 6.0 2.1 303 chr3L 1740841 intron Gk + chr3L 1740992 intron Gk + chr3L 1741144 intron Gk + chr3L_15_1740001 chr3L_1740001 RAL-406 1303 chr3L 1853030 1853047 chr3L 1853129 1853151 12 102 6.5 6.5 6.5 1.6 121 chr3L 1853030 intron CG13936 - chr3L 1853090 intron CG13936 - chr3L 1853151 intron CG13936 - chr3L_12_1850001 chr3L_1850001 RAL-406 1304 chr3L 1882351 1882382 chr3L 1882462 1882486 5 112 3.5 1.5 2.5 1.4 135 chr3L 1882351 intron CG13937 - chr3L 1882418 intron CG13937 - chr3L 1882486 intron CG13937 - chr3L_5_1880001 chr3L_1880001 RAL-406 1305 chr3L 1922998 1923039 chr3L 1923107 1923131 14 104 5.0 8.0 6.5 1.9 133 chr3L 1922998 intron Dbx + chr3L 1923064 intron Dbx + chr3L 1923131 intron Dbx + chr3L_14_1920001 chr3L_1920001 RAL-406 1306 chr3L 1924942 1924977 chr3L 1925100 1925135 10 155 1.5 2.0 1.8 3.6 193 chr3L 1924942 exon Dbx + chr3L 1925038 intron Dbx + chr3L 1925135 intron Dbx + chr3L_10_1925001 chr3L_1925001 RAL-406 1307 chr3L 1975720 1975770 chr3L 1975819 1975867 26 97 5.5 4.0 4.8 4.5 147 chr3L 1975720 intergenic not near genes chr3L 1975794 intergenic not near genes chr3L 1975867 intergenic not near genes chr3L_26_1975001 chr3L_1975001 RAL-406 1308 chr3L 1988836 1988873 chr3L 1989019 1989072 4 191 1.0 3.0 2.0 1.3 236 chr3L 1988836 intergenic not near genes chr3L 1988954 intergenic not near genes chr3L 1989072 intergenic not near genes chr3L_4_1985001 chr3L_1985001 RAL-406 1309 chr3L 1991131 1991147 chr3L 1991213 1991244 10 94 8.5 2.0 5.2 1.6 113 chr3L 1991131 intergenic not near genes chr3L 1991188 intergenic not near genes chr3L 1991244 intergenic not near genes chr3L_10_1990001 chr3L_1990001 RAL-406 1310 chr3L 2015756 2015761 chr3L 2015854 2015859 5 98 7.0 0.0 3.5 1.1 103 chr3L 2015756 intergenic not near genes chr3L 2015808 intergenic not near genes chr3L 2015859 intergenic not near genes chr3L_5_2015001 chr3L_2015001 RAL-406 1311 chr3L 2108228 2108282 chr3L 2113452 2113506 copia 23 5221 6.5 7.5 7.0 2.9 5278 chr3L 2108228 intron sls - chr3L 2110867 intron sls - chr3L 2113506 intron sls - chr3L_23_2110001 chr3L_2110001 RAL-406 1312 chr3L 2168761 2168794 chr3L 2168872 2168905 11 108 4.0 5.0 4.5 2.0 144 chr3L 2168761 exon CG15879 - chr3L 2168833 intron CG15879 - chr3L 2168905 intron CG15879 - chr3L_11_2165001 chr3L_2165001 RAL-406 1313 chr3L 2168797 2168803 chr3L 2168868 2168914 6 96 3.0 4.5 3.8 1.2 117 chr3L 2168797 intron CG15879 - chr3L 2168856 intron CG15879 - chr3L 2168914 intron CG15879 - chr3L_6_2165001 chr3L_2165001 RAL-406 1314 chr3L 2199790 2199819 chr3L 2199886 2199915 7 96 0.5 6.5 3.5 1.6 125 chr3L 2199790 intergenic not near genes chr3L 2199852 intergenic not near genes chr3L 2199915 intergenic not near genes chr3L_7_2195001 chr3L_2195001 RAL-406 1315 chr3L 2277957 2277989 chr3L 2278173 2278205 4 216 6.0 4.5 5.2 0.6 248 chr3L 2277957 3` UTR yellow-g2 + chr3L 2278081 intergenic yellow-g2 + chr3L 2278205 intergenic yellow-g2 + chr3L_4_2275001 chr3L_2275001 RAL-406 1316 chr3L 2277990 2278010 chr3L 2278171 2278226 10 212 4.0 4.5 4.2 1.9 236 chr3L 2277990 3` UTR yellow-g2 + chr3L 2278108 intergenic yellow-g2 + chr3L 2278226 intergenic yellow-g2 + chr3L_10_2275001 chr3L_2275001 RAL-406 1317 chr3L 2282973 2283022 chr3L 2283069 2283118 14 95 4.0 8.0 6.0 2.0 145 chr3L 2282973 5` UTR MsR2 + chr3L 2283046 5` UTR MsR2 + chr3L 2283118 5` UTR MsR2 + chr3L_14_2280001 chr3L_2280001 RAL-406 1318 chr3L 2300729 2300746 chr3L 2300840 2300857 6 111 7.5 8.0 7.8 0.7 128 chr3L 2300729 3` UTR MsR2 + chr3L 2300793 3` UTR MsR2 + chr3L 2300857 3` UTR MsR2 + chr3L_6_2300001 chr3L_2300001 RAL-406 1319 chr3L 2300747 2300772 chr3L 2300836 2300883 12 109 4.5 6.5 5.5 1.8 136 chr3L 2300747 3` UTR MsR2 + chr3L 2300815 3` UTR MsR2 + chr3L 2300883 3` UTR MsR2 + chr3L_12_2300001 chr3L_2300001 RAL-406 1320 chr3L 2307988 2308005 chr3L 2308114 2308114 4 122 11.5 6.0 8.8 0.4 126 chr3L 2307988 intergenic not near genes chr3L 2308051 intergenic not near genes chr3L 2308114 intergenic not near genes chr3L_4_2305001 chr3L_2305001 RAL-406 1321 chr3L 2308006 2308031 chr3L 2308111 2308125 15 114 5.0 5.5 5.2 2.4 119 chr3L 2308006 intergenic not near genes chr3L 2308066 intergenic not near genes chr3L 2308125 intergenic not near genes chr3L_15_2305001 chr3L_2305001 RAL-406 1322 chr3L 2310383 2310424 chr3L 2310479 2310516 12 90 3.5 3.0 3.2 2.9 133 chr3L 2310383 intergenic not near genes chr3L 2310450 intergenic not near genes chr3L 2310516 intergenic not near genes chr3L_12_2310001 chr3L_2310001 RAL-406 1323 chr3L 2315957 2315978 chr3L 2316053 2316074 6 96 9.0 4.5 6.8 0.8 117 chr3L 2315957 intergenic not near genes chr3L 2316016 intergenic not near genes chr3L 2316074 intergenic not near genes chr3L_6_2315001 chr3L_2315001 RAL-406 1324 chr3L 2315983 2315993 chr3L 2316049 2316068 6 78 6.5 3.5 5.0 1.0 85 chr3L 2315983 intergenic not near genes chr3L 2316026 intergenic not near genes chr3L 2316068 intergenic not near genes chr3L_6_2315001 chr3L_2315001 RAL-406 1325 chr3L 2359978 2359991 chr3L 2360237 2360253 4 259 34.5 25.0 29.8 0.1 275 chr3L 2359978 intergenic not near genes chr3L 2360116 intergenic CG13801 + chr3L 2360253 intergenic CG13801 + chr3L_4_2360001 chr3L_2360001 RAL-406 1326 chr3L 2373503 2373539 chr3L 2373579 2373614 18 85 5.0 8.0 6.5 2.4 111 chr3L 2373503 intron mRpL23 - chr3L 2373558 intron mRpL23 - chr3L 2373614 intron mRpL23 - chr3L_18_2370001 chr3L_2370001 RAL-406 1327 chr3L 2447490 2447534 chr3L 2456661 2456681 roo 11 9167 6.5 3.5 5.0 1.8 9191 chr3L 2447490 intron CG45186 + chr3L 2452086 intron CG45186 + chr3L 2456681 intron CG45186 + chr3L_11_2450001 chr3L_2450001 RAL-406 1328 chr3L 2524311 2524327 chr3L 2524494 2524510 9 183 2.0 2.0 2.0 3.0 199 chr3L 2524311 intron Spn - chr3L 2524410 intron Spn - chr3L 2524510 intron Spn - chr3L_9_2520001 chr3L_2520001 RAL-406 1329 chr3L 2534622 2534640 chr3L 2534707 2534743 7 98 0.0 4.5 2.2 2.2 121 chr3L 2534622 intron Spn - chr3L 2534682 intron Spn - chr3L 2534743 exon Spn - chr3L_7_2530001 chr3L_2530001 RAL-406 1330 chr3L 2546742 2546746 chr3L 2546851 2546855 6 109 17.0 0.5 8.8 0.6 113 chr3L 2546742 intron Spn - chr3L 2546798 intron Spn - chr3L 2546855 intron Spn - chr3L_6_2545001 chr3L_2545001 RAL-406 1331 chr3L 2546748 2546794 chr3L 2546850 2546903 4 106 6.0 0.5 3.2 1.0 155 chr3L 2546748 intron Spn - chr3L 2546826 intron Spn - chr3L 2546903 intron Spn - chr3L_4_2545001 chr3L_2545001 RAL-406 1332 chr3L 2581883 2581915 chr3L 2581997 2582029 12 112 0.5 6.0 3.2 2.9 146 chr3L 2581883 intron msn - chr3L 2581956 intron msn - chr3L 2582029 intron msn - chr3L_12_2580001 chr3L_2580001 RAL-406 1333 chr3L 2683932 2683974 chr3L 2684025 2684041 14 91 4.5 3.0 3.8 2.9 109 chr3L 2683932 intron Fife - chr3L 2683986 intron Fife - chr3L 2684041 intron Fife - chr3L_14_2680001 chr3L_2680001 RAL-406 1334 chr3L 2751446 2751464 chr3L 2755751 2755759 F-element 8 4311 20.5 7.5 14.0 0.5 4313 chr3L 2751446 intron Mrtf - chr3L 2753602 intron Mrtf - chr3L 2755759 intron Mrtf - chr3L_8_2750001 chr3L_2750001 RAL-406 1335 chr3L 2766726 2766764 chr3L 2766843 2766870 9 113 3.0 7.0 5.0 1.5 144 chr3L 2766726 intergenic Mrtf -,Non2 + chr3L 2766798 intergenic Non2 +,Mrtf - chr3L 2766870 intergenic Non2 +,Mrtf - chr3L_9_2765001 chr3L_2765001 RAL-406 1336 chr3L 2795709 2795742 chr3L 2795852 2795854 12 139 7.0 6.5 6.8 1.5 145 chr3L 2795709 intron CG43444 - chr3L 2795782 intron CG43444 - chr3L 2795854 intron CG43444 - chr3L_12_2795001 chr3L_2795001 RAL-406 1337 chr3L 2812731 2812758 chr3L 2813092 2813119 8 358 3.5 3.0 3.2 1.9 388 chr3L 2812731 intron CG43444 - chr3L 2812925 intron CG43444 - chr3L 2813119 intron CG43444 - chr3L_8_2810001 chr3L_2810001 RAL-406 1338 chr3L 2927819 2927870 chr3L 2936116 2936167 Tirant 9 8296 3.0 8.0 5.5 1.4 8348 chr3L 2927819 intron Shab + chr3L 2931993 intron Shab + chr3L 2936167 intron Shab + chr3L_9_2930001 chr3L_2930001 RAL-406 1339 chr3L 2966702 2966713 chr3L 2974147 2974148 mdg1 8 7444 8.5 5.5 7.0 1.0 7446 chr3L 2966702 intergenic not near genes chr3L 2970425 intergenic not near genes chr3L 2974148 intergenic not near genes chr3L_8_2970001 chr3L_2970001 RAL-406 1340 chr3L 2966715 2966722 chr3L 2974145 2974167 mdg1 5 7442 6.5 4.5 5.5 0.8 7452 chr3L 2966715 intergenic not near genes chr3L 2970441 intergenic not near genes chr3L 2974167 intergenic not near genes chr3L_5_2970001 chr3L_2970001 RAL-406 1341 chr3L 3114975 3115025 chr3L 3115079 3115080 14 94 3.5 6.0 4.8 2.4 105 chr3L 3114975 3` UTR prominin-like - chr3L 3115028 3` UTR prominin-like - chr3L 3115080 3` UTR prominin-like - chr3L_14_3115001 chr3L_3115001 RAL-406 1342 chr3L 3124051 3124095 chr3L 3124142 3124191 15 91 9.0 2.5 5.8 2.2 140 chr3L 3124051 intron prominin-like - chr3L 3124121 intron prominin-like - chr3L 3124191 intron prominin-like - chr3L_15_3120001 chr3L_3120001 RAL-406 1343 chr3L 3254066 3254102 chr3L 3254177 3254213 13 110 7.5 6.0 6.8 1.7 147 chr3L 3254066 5` UTR CR43626 + chr3L 3254140 5` UTR CR43626 + chr3L 3254213 5` UTR CR43626 + chr3L_13_3250001 chr3L_3250001 RAL-406 1344 chr3L 3257069 3257119 chr3L 3257265 3257316 19 190 1.0 8.0 4.5 3.5 247 chr3L 3257069 intergenic not near genes chr3L 3257192 intergenic not near genes chr3L 3257316 intergenic not near genes chr3L_19_3255001 chr3L_3255001 RAL-406 1345 chr3L 3259601 3259631 chr3L 3259716 3259716 11 108 7.0 6.0 6.5 1.5 115 chr3L 3259601 intron ckd + chr3L 3259658 intron ckd + chr3L 3259716 intron ckd + chr3L_11_3255001 chr3L_3255001 RAL-406 1346 chr3L 3259637 3259831 chr3L 3259712 3259951 11 110 1.5 5.5 3.5 2.4 314 chr3L 3259637 intron ckd + chr3L 3259794 intron ckd + chr3L 3259951 intron ckd + chr3L_11_3255001 chr3L_3255001 RAL-406 1347 chr3L 3269087 3269123 chr3L 3269198 3269230 10 108 0.0 4.0 2.0 3.3 143 chr3L 3269087 intergenic CG34265 + chr3L 3269158 intergenic CG34265 + chr3L 3269230 intergenic CG34265 + chr3L_10_3265001 chr3L_3265001 RAL-406 1348 chr3L 3281429 3281476 chr3L 3281942 3281963 Doc 10 499 3.0 3.5 3.2 2.4 534 chr3L 3281429 intron CG12017 + chr3L 3281696 intron CG12017 + chr3L 3281963 intron CG12017 + chr3L_10_3280001 chr3L_3280001 RAL-406 1349 chr3L 3294129 3294144 chr3L 3294229 3294242 10 105 3.5 4.5 4.0 2.0 113 chr3L 3294129 intron CG12009 + chr3L 3294186 intron CG12009 + chr3L 3294242 intron CG12009 + chr3L_10_3290001 chr3L_3290001 RAL-406 1350 chr3L 3310272 3310322 chr3L 3310371 3310415 17 95 9.5 4.5 7.0 2.1 143 chr3L 3310272 intron ZnT63C + chr3L 3310344 intron ZnT63C + chr3L 3310415 intron ZnT63C + chr3L_17_3310001 chr3L_3310001 RAL-406 1351 chr3L 3317516 3317559 chr3L 3317615 3317658 16 96 1.5 6.0 3.8 3.3 142 chr3L 3317516 intergenic Drsl5 + chr3L 3317587 intergenic PIG-C -,Drsl5 + chr3L 3317658 intergenic PIG-C - chr3L_16_3315001 chr3L_3315001 RAL-406 1352 chr3L 3450910 3450947 chr3L 3451003 3451003 4 81 3.0 4.0 3.5 0.9 93 chr3L 3450910 intron eIF5B - chr3L 3450956 intron eIF5B - chr3L 3451003 intron eIF5B - chr3L_4_3450001 chr3L_3450001 RAL-406 1353 chr3L 3475062 3475111 chr3L 3475526 3475555 jockey 8 460 2.0 1.0 1.5 3.2 493 chr3L 3475062 intron CG42324 + chr3L 3475308 intron CG42324 + chr3L 3475555 intron CG42324 + chr3L_8_3475001 chr3L_3475001 RAL-406 1354 chr3L 3484419 3484446 chr3L 3484495 3484543 14 90 4.0 3.0 3.5 3.1 124 chr3L 3484419 intron,intron CG42324 +,CG43074 - chr3L 3484481 intron,exon CG42324 +,CG43074 - chr3L 3484543 intron,intron CG42324 +,CG43074 - chr3L_14_3480001 chr3L_3480001 RAL-406 1355 chr3L 3494181 3494202 chr3L 3494278 3494299 7 97 1.0 2.5 1.8 2.5 118 chr3L 3494181 intron CG42324 + chr3L 3494240 intron CG42324 + chr3L 3494299 intron CG42324 + chr3L_7_3490001 chr3L_3490001 RAL-406 1356 chr3L 3565961 3565968 chr3L 3566040 3566064 4 92 4.5 7.5 6.0 0.6 103 chr3L 3565961 intron Eip63E + chr3L 3566012 intron Eip63E + chr3L 3566064 intron Eip63E + chr3L_4_3565001 chr3L_3565001 RAL-406 1357 chr3L 3593875 3593898 chr3L 3593980 3594003 10 105 4.5 0.0 2.2 3.1 128 chr3L 3593875 intron,5` UTR Eip63E +,snRNA:U7 + chr3L 3593939 intron Eip63E + chr3L 3594003 intron Eip63E + chr3L_10_3590001 chr3L_3590001 RAL-406 1358 chr3L 3619402 3619434 chr3L 3619516 3619537 13 111 6.5 8.0 7.2 1.6 135 chr3L 3619402 intergenic not near genes chr3L 3619470 intergenic not near genes chr3L 3619537 intergenic not near genes chr3L_13_3615001 chr3L_3615001 RAL-406 1359 chr3L 3763741 3763779 chr3L 3763842 3763847 4 80 6.0 1.5 3.8 0.8 106 chr3L 3763741 intron CG32264 - chr3L 3763794 intron CG32264 - chr3L 3763847 intron CG32264 - chr3L_4_3760001 chr3L_3760001 RAL-406 1360 chr3L 3766718 3766746 chr3L 3766824 3766852 8 105 4.0 3.0 3.5 1.8 134 chr3L 3766718 intron CG32264 - chr3L 3766785 intron CG32264 - chr3L 3766852 intron CG32264 - chr3L_8_3765001 chr3L_3765001 RAL-406 1361 chr3L 3768952 3768981 chr3L 3769063 3769102 10 116 4.5 2.5 3.5 2.2 150 chr3L 3768952 intron CG32264 - chr3L 3769027 intron CG32264 - chr3L 3769102 exon CG32264 - chr3L_10_3765001 chr3L_3765001 RAL-406 1362 chr3L 3783258 3783286 chr3L 3783349 3783361 10 90 6.5 7.0 6.8 1.3 103 chr3L 3783258 intron CG32264 - chr3L 3783310 intron CG32264 - chr3L 3783361 intron CG32264 - chr3L_10_3780001 chr3L_3780001 RAL-406 1363 chr3L 3795571 3795626 chr3L 3795668 3795723 23 91 8.5 4.5 6.5 3.1 152 chr3L 3795571 intron CG32264 - chr3L 3795647 intron CG32264 - chr3L 3795723 intron CG32264 - chr3L_23_3795001 chr3L_3795001 RAL-406 1364 chr3L 3797223 3797265 chr3L 3797326 3797328 20 99 4.0 6.0 5.0 3.3 105 chr3L 3797223 intron CG32264 - chr3L 3797276 intron CG32264 - chr3L 3797328 intron CG32264 - chr3L_20_3795001 chr3L_3795001 RAL-406 1365 chr3L 3833728 3833765 chr3L 3833978 3834005 pogo 8 254 6.5 1.5 4.0 1.6 277 chr3L 3833728 intron enc + chr3L 3833866 intron enc + chr3L 3834005 intron enc + chr3L_8_3830001 chr3L_3830001 RAL-406 1366 chr3L 3845538 3845581 chr3L 3845652 3845695 14 111 4.0 6.0 5.0 2.3 157 chr3L 3845538 intergenic not near genes chr3L 3845616 intergenic not near genes chr3L 3845695 intergenic not near genes chr3L_14_3845001 chr3L_3845001 RAL-406 1367 chr3L 3877441 3877457 chr3L 3877582 3877600 6 141 0.0 4.0 2.0 2.0 159 chr3L 3877441 intergenic not near genes chr3L 3877520 intergenic not near genes chr3L 3877600 intergenic not near genes chr3L_6_3875001 chr3L_3875001 RAL-406 1368 chr3L 3877458 3877468 chr3L 3877581 3877611 9 138 0.0 4.0 2.0 3.0 153 chr3L 3877458 intergenic not near genes chr3L 3877534 intergenic not near genes chr3L 3877611 intergenic not near genes chr3L_9_3875001 chr3L_3875001 RAL-406 1369 chr3L 3888982 3889014 chr3L 3889105 3889147 8 127 2.5 0.0 1.2 3.6 165 chr3L 3888982 intergenic not near genes chr3L 3889064 intergenic not near genes chr3L 3889147 intergenic not near genes chr3L_8_3885001 chr3L_3885001 RAL-406 1370 chr3L 3890941 3890986 chr3L 3891042 3891087 22 101 5.0 0.0 2.5 6.3 146 chr3L 3890941 intergenic not near genes chr3L 3891014 intergenic not near genes chr3L 3891087 intergenic not near genes chr3L_22_3890001 chr3L_3890001 RAL-406 1371 chr3L 3935807 3935848 chr3L 3935905 3935946 24 96 0.0 10.0 5.0 4.0 139 chr3L 3935807 5` UTR Eip63F-2 + chr3L 3935876 5` UTR Eip63F-2 + chr3L 3935946 5` UTR Eip63F-2 + chr3L_24_3935001 chr3L_3935001 RAL-406 1372 chr3L 4038029 4038065 chr3L 4038122 4038167 15 98 6.5 7.5 7.0 1.9 138 chr3L 4038029 3` UTR CG11593 - chr3L 4038098 3` UTR CG11593 - chr3L 4038167 3` UTR CG11593 - chr3L_15_4035001 chr3L_4035001 RAL-406 1373 chr3L 4170073 4170107 chr3L 4170257 4170296 9 188 4.0 2.0 3.0 2.2 223 chr3L 4170073 intergenic Ero1L + chr3L 4170184 intergenic Ero1L + chr3L 4170296 intergenic Ero1L + chr3L_9_4170001 chr3L_4170001 RAL-406 1374 chr3L 4214519 4214549 chr3L 4214681 4214695 10 158 7.5 3.0 5.2 1.6 176 chr3L 4214519 intron CG43367 + chr3L 4214607 intron CG43367 + chr3L 4214695 intron CG43367 + chr3L_10_4210001 chr3L_4210001 RAL-406 1375 chr3L 4328733 4328764 chr3L 4336249 4336271 412 12 7513 6.0 5.0 5.5 1.8 7538 chr3L 4328733 intron Cip4 - chr3L 4332502 intron Cip4 - chr3L 4336271 exon Cip4 - chr3L_12_4330001 chr3L_4330001 RAL-406 1376 chr3L 4347810 4347857 chr3L 4347915 4347963 15 101 3.5 6.5 5.0 2.5 153 chr3L 4347810 intron Cip4 - chr3L 4347886 intron Cip4 - chr3L 4347963 intron Cip4 - chr3L_15_4345001 chr3L_4345001 RAL-406 1377 chr3L 4364203 4364234 chr3L 4364312 4364343 13 109 2.0 10.0 6.0 1.9 140 chr3L 4364203 intergenic Cip4 -,mRpS6 + chr3L 4364273 intergenic Cip4 -,mRpS6 + chr3L 4364343 intergenic mRpS6 +,Cip4 - chr3L_13_4360001 chr3L_4360001 RAL-406 1378 chr3L 4441817 4441821 chr3L 4441916 4441920 4 99 13.5 1.0 7.2 0.5 103 chr3L 4441817 intergenic not near genes chr3L 4441868 intergenic not near genes chr3L 4441920 intergenic not near genes chr3L_4_4440001 chr3L_4440001 RAL-406 1379 chr3L 4441827 4441852 chr3L 4441913 4441951 11 94 7.0 1.0 4.0 2.2 124 chr3L 4441827 intergenic not near genes chr3L 4441889 intergenic not near genes chr3L 4441951 intergenic not near genes chr3L_11_4440001 chr3L_4440001 RAL-406 1380 chr3L 4543349 4543357 chr3L 4543785 4543803 7 442 0.5 3.5 2.0 2.3 454 chr3L 4543349 intron CG11357 + chr3L 4543576 intron CG11357 + chr3L 4543803 intron CG11357 + chr3L_7_4540001 chr3L_4540001 RAL-406 1381 chr3L 4597196 4597216 chr3L 4597296 4597318 5 100 6.0 5.5 5.8 0.7 122 chr3L 4597196 intron Src64B - chr3L 4597257 intron Src64B - chr3L 4597318 intron Src64B - chr3L_5_4595001 chr3L_4595001 RAL-406 1382 chr3L 4597228 4597241 chr3L 4597294 4597343 5 81 5.0 5.0 5.0 0.8 115 chr3L 4597228 intron Src64B - chr3L 4597286 intron Src64B - chr3L 4597343 intron Src64B - chr3L_5_4595001 chr3L_4595001 RAL-406 1383 chr3L 4607248 4607291 chr3L 4607359 4607402 10 110 5.0 2.5 3.8 2.1 154 chr3L 4607248 intron Src64B - chr3L 4607325 intron Src64B - chr3L 4607402 intron Src64B - chr3L_10_4605001 chr3L_4605001 RAL-406 1384 chr3L 4638762 4638788 chr3L 4638877 4638903 5 118 2.0 4.0 3.0 1.2 141 chr3L 4638762 intron axo - chr3L 4638832 intron axo - chr3L 4638903 intron axo - chr3L_5_4635001 chr3L_4635001 RAL-406 1385 chr3L 4662389 4662421 chr3L 4662486 4662497 11 91 4.5 7.0 5.8 1.6 108 chr3L 4662389 intron axo - chr3L 4662443 intron axo - chr3L 4662497 intron axo - chr3L_11_4660001 chr3L_4660001 RAL-406 1386 chr3L 4665120 4665135 chr3L 4665254 4665255 8 133 0.5 5.5 3.0 2.0 135 chr3L 4665120 intron axo - chr3L 4665188 intron axo - chr3L 4665255 intron axo - chr3L_8_4665001 chr3L_4665001 RAL-406 1387 chr3L 4685539 4685577 chr3L 4685932 4685971 5 394 6.0 4.5 5.2 0.8 432 chr3L 4685539 intron axo - chr3L 4685755 intron axo - chr3L 4685971 intron axo - chr3L_5_4685001 chr3L_4685001 RAL-406 1388 chr3L 4713300 4713328 chr3L 4713391 4713393 5 81 3.5 0.0 1.8 1.8 93 chr3L 4713300 intron RhoGEF64C + chr3L 4713346 intron RhoGEF64C + chr3L 4713393 intron RhoGEF64C + chr3L_5_4710001 chr3L_4710001 RAL-406 1389 chr3L 4725306 4725356 chr3L 4725414 4725464 20 106 5.5 3.0 4.2 3.8 158 chr3L 4725306 intron RhoGEF64C + chr3L 4725385 intron RhoGEF64C + chr3L 4725464 intron RhoGEF64C + chr3L_20_4725001 chr3L_4725001 RAL-406 1390 chr3L 4748691 4748710 chr3L 4748802 4748821 4 111 4.0 3.5 3.8 0.8 130 chr3L 4748691 intron RhoGEF64C + chr3L 4748756 intron RhoGEF64C + chr3L 4748821 intron RhoGEF64C + chr3L_4_4745001 chr3L_4745001 RAL-406 1391 chr3L 4784937 4784988 chr3L 4785166 4785212 8 228 0.0 1.5 0.8 4.4 275 chr3L 4784937 intron RhoGEF64C + chr3L 4785074 intron RhoGEF64C + chr3L 4785212 intron RhoGEF64C + chr3L_8_4785001 chr3L_4785001 RAL-406 1392 chr3L 4858324 4858336 chr3L 4858393 4858408 4 79 3.0 3.5 3.2 1.0 84 chr3L 4858324 intergenic not near genes chr3L 4858366 intergenic not near genes chr3L 4858408 intergenic not near genes chr3L_4_4855001 chr3L_4855001 RAL-406 1393 chr3L 4901109 4901160 chr3L 4907319 4907370 diver 7 6206 4.5 1.5 3.0 1.8 6261 chr3L 4901109 intergenic CG13704 + chr3L 4904240 intergenic not near genes chr3L 4907370 intergenic not near genes chr3L_7_4900001 chr3L_4900001 RAL-406 1394 chr3L 4958439 4958441 chr3L 4958500 4958549 7 82 1.5 1.0 1.2 3.2 110 chr3L 4958439 intron Con - chr3L 4958494 intron Con - chr3L 4958549 intron Con - chr3L_7_4955001 chr3L_4955001 RAL-406 1395 chr3L 5034140 5034185 chr3L 5043312 5043357 roo 10 9169 3.5 9.0 6.2 1.4 9217 chr3L 5034140 intron Con - chr3L 5038748 intron Con - chr3L 5043357 intron Con - chr3L_10_5035001 chr3L_5035001 RAL-406 1396 chr3L 5045439 5045459 chr3L 5050240 5050260 Doc 9 4800 7.0 4.5 5.8 1.3 4821 chr3L 5045439 intron Con - chr3L 5047850 intron Con - chr3L 5050260 intron Con - chr3L_9_5045001 chr3L_5045001 RAL-406 1397 chr3L 5045460 5045479 chr3L 5050235 5050280 Doc 10 4796 5.0 4.0 4.5 1.8 4820 chr3L 5045460 intron Con - chr3L 5047870 intron Con - chr3L 5050280 intron Con - chr3L_10_5045001 chr3L_5045001 RAL-406 1398 chr3L 5089123 5089148 chr3L 5089221 5089246 14 97 0.0 6.0 3.0 3.5 123 chr3L 5089123 intergenic not near genes chr3L 5089184 intergenic not near genes chr3L 5089246 intergenic not near genes chr3L_14_5085001 chr3L_5085001 RAL-406 1399 chr3L 5104475 5104503 chr3L 5124619 5124657 12 20151 8.0 1.5 4.8 2.1 20182 chr3L 5104475 intergenic not near genes chr3L 5114566 intergenic not near genes chr3L 5124657 intergenic not near genes chr3L_12_5110001 chr3L_5110001 RAL-406 1400 chr3L 5164615 5164670 chr3L 5164711 5164766 21 93 7.0 8.0 7.5 2.5 151 chr3L 5164615 intron shep - chr3L 5164690 intron shep - chr3L 5164766 intron shep - chr3L_21_5160001 chr3L_5160001 RAL-406 1401 chr3L 5251846 5251868 chr3L 5251945 5251949 7 96 0.0 8.5 4.2 1.3 103 chr3L 5251846 intron shep - chr3L 5251898 intron shep - chr3L 5251949 intron shep - chr3L_7_5250001 chr3L_5250001 RAL-406 1402 chr3L 5261147 5261167 chr3L 5261245 5261265 9 98 11.5 4.0 7.8 1.0 118 chr3L 5261147 intron shep - chr3L 5261206 intron shep - chr3L 5261265 intron shep - chr3L_9_5260001 chr3L_5260001 RAL-406 1403 chr3L 5269268 5269277 chr3L 5269417 5269419 5 148 7.5 23.5 15.5 0.3 151 chr3L 5269268 intron shep - chr3L 5269344 intron shep - chr3L 5269419 intron shep - chr3L_5_5265001 chr3L_5265001 RAL-406 1404 chr3L 5299154 5299171 chr3L 5306600 5306617 Quasimodo 7 7445 4.0 0.0 2.0 2.3 7463 chr3L 5299154 intergenic not near genes chr3L 5302886 intergenic not near genes chr3L 5306617 intergenic not near genes chr3L_7_5300001 chr3L_5300001 RAL-406 1405 chr3L 5306653 5306667 chr3L 5306763 5306777 6 108 0.5 4.5 2.5 1.7 124 chr3L 5306653 intergenic not near genes chr3L 5306715 intergenic not near genes chr3L 5306777 intergenic not near genes chr3L_6_5305001 chr3L_5305001 RAL-406 1406 chr3L 5327458 5327478 chr3L 5327560 5327583 9 104 5.0 8.5 6.8 1.2 125 chr3L 5327458 intergenic not near genes chr3L 5327520 intergenic not near genes chr3L 5327583 intergenic not near genes chr3L_9_5325001 chr3L_5325001 RAL-406 1407 chr3L 5339816 5339850 chr3L 5340068 5340114 18 260 3.0 4.0 3.5 4.0 298 chr3L 5339816 intergenic not near genes chr3L 5339965 intergenic not near genes chr3L 5340114 intergenic not near genes chr3L_18_5335001 chr3L_5335001 RAL-406 1408 chr3L 5351084 5351128 chr3L 5351189 5351233 15 104 7.5 4.0 5.8 2.2 149 chr3L 5351084 intron lama - chr3L 5351158 intron lama - chr3L 5351233 intron lama - chr3L_15_5350001 chr3L_5350001 RAL-406 1409 chr3L 5376024 5376043 chr3L 5376118 5376142 6 91 0.0 3.0 1.5 2.4 118 chr3L 5376024 intergenic not near genes chr3L 5376083 intergenic not near genes chr3L 5376142 intergenic not near genes chr3L_6_5375001 chr3L_5375001 RAL-406 1410 chr3L 5388203 5388226 chr3L 5388526 5388568 9 333 6.5 8.0 7.2 1.1 365 chr3L 5388203 intergenic not near genes chr3L 5388386 intergenic not near genes chr3L 5388568 intergenic not near genes chr3L_9_5385001 chr3L_5385001 RAL-406 1411 chr3L 5393454 5393466 chr3L 5393636 5393643 7 181 3.5 0.0 1.8 2.5 189 chr3L 5393454 intergenic not near genes chr3L 5393548 intergenic not near genes chr3L 5393643 intergenic not near genes chr3L_7_5390001 chr3L_5390001 RAL-406 1412 chr3L 5449513 5449564 chr3L 5449612 5449620 15 93 6.5 7.0 6.8 1.9 107 chr3L 5449513 intergenic not near genes chr3L 5449566 intergenic not near genes chr3L 5449620 intergenic not near genes chr3L_15_5445001 chr3L_5445001 RAL-406 1413 chr3L 5493189 5493223 chr3L 5493340 5493389 14 162 5.5 4.5 5.0 2.3 200 chr3L 5493189 intergenic CR44520 - chr3L 5493289 intergenic CR44520 - chr3L 5493389 intergenic CR44520 - chr3L_14_5490001 chr3L_5490001 RAL-406 1414 chr3L 5537716 5537752 chr3L 5538063 5538089 jockey 14 354 6.5 5.5 6.0 2.0 373 chr3L 5537716 intergenic not near genes chr3L 5537902 intergenic not near genes chr3L 5538089 intergenic CG10625 - chr3L_14_5535001 chr3L_5535001 RAL-406 1415 chr3L 5666265 5666270 chr3L 5666377 5666382 5 112 0.0 0.5 0.2 4.2 117 chr3L 5666265 intron sif + chr3L 5666324 intron sif + chr3L 5666382 intron sif + chr3L_5_5665001 chr3L_5665001 RAL-406 1416 chr3L 5667609 5667647 chr3L 5667709 5667713 11 94 8.5 0.0 4.2 2.1 104 chr3L 5667609 intron sif + chr3L 5667661 intron sif + chr3L 5667713 intron sif + chr3L_11_5665001 chr3L_5665001 RAL-406 1417 chr3L 5690455 5690498 chr3L 5690553 5690580 12 92 9.0 3.5 6.2 1.7 125 chr3L 5690455 intron sif + chr3L 5690518 intron sif + chr3L 5690580 intron sif + chr3L_12_5690001 chr3L_5690001 RAL-406 1418 chr3L 5801659 5801689 chr3L 5801766 5801796 7 103 0.5 4.5 2.5 2.0 137 chr3L 5801659 intron S6k - chr3L 5801728 intron S6k - chr3L 5801796 intron S6k - chr3L_7_5800001 chr3L_5800001 RAL-406 1419 chr3L 5826128 5826163 chr3L 5826232 5826247 10 95 4.0 9.5 6.8 1.3 119 chr3L 5826128 intron vn - chr3L 5826188 intron vn - chr3L 5826247 intron vn - chr3L_10_5825001 chr3L_5825001 RAL-406 1420 chr3L 5839559 5839591 chr3L 5839658 5839658 8 92 7.5 6.5 7.0 1.0 99 chr3L 5839559 intron vn - chr3L 5839608 intron vn - chr3L 5839658 intron vn - chr3L_8_5835001 chr3L_5835001 RAL-406 1421 chr3L 5910016 5910062 chr3L 5910277 5910318 pogo 17 259 8.0 9.0 8.5 1.8 302 chr3L 5910016 intron CG13288 + chr3L 5910167 intron CG13288 + chr3L 5910318 intron CG13288 + chr3L_17_5910001 chr3L_5910001 RAL-406 1422 chr3L 5926338 5926347 chr3L 5926505 5926511 BS 6 170 5.0 7.0 6.0 0.9 173 chr3L 5926338 intron Vap-33B + chr3L 5926424 intron Vap-33B + chr3L 5926511 intron Vap-33B + chr3L_6_5925001 chr3L_5925001 RAL-406 1423 chr3L 6001664 6001699 chr3L 6004384 6004408 jockey 12 2718 8.0 14.0 11.0 1.0 2744 chr3L 6001664 intron PVRAP + chr3L 6003036 intron PVRAP + chr3L 6004408 intron PVRAP + chr3L_12_6000001 chr3L_6000001 RAL-406 1424 chr3L 6022222 6022272 chr3L 6022326 6022371 13 100 1.0 1.0 1.0 6.5 149 chr3L 6022222 intron PVRAP + chr3L 6022296 intron PVRAP + chr3L 6022371 intron PVRAP + chr3L_13_6020001 chr3L_6020001 RAL-406 1425 chr3L 6040259 6040299 chr3L 6040351 6040351 12 90 4.0 2.5 3.2 2.9 92 chr3L 6040259 intergenic Jon65Aiv + chr3L 6040305 intergenic Jon65Aiv + chr3L 6040351 intergenic Jon65Aiv + chr3L_12_6040001 chr3L_6040001 RAL-406 1426 chr3L 6040354 6040387 chr3L 6042724 6042763 Doc 9 2375 3.0 10.5 6.8 1.2 2409 chr3L 6040354 intergenic Jon65Aiv + chr3L 6041558 intergenic not near genes chr3L 6042763 intergenic not near genes chr3L_9_6040001 chr3L_6040001 RAL-406 1427 chr3L 6040388 6040394 chr3L 6042723 6042770 Doc 4 2366 4.0 10.5 7.2 0.5 2382 chr3L 6040388 intergenic Jon65Aiv + chr3L 6041579 intergenic not near genes chr3L 6042770 intergenic not near genes chr3L_4_6040001 chr3L_6040001 RAL-406 1428 chr3L 6064995 6065040 chr3L 6065092 6065137 20 91 11.5 6.5 9.0 2.0 142 chr3L 6064995 intergenic not near genes chr3L 6065066 intergenic not near genes chr3L 6065137 intergenic not near genes chr3L_20_6065001 chr3L_6065001 RAL-406 1429 chr3L 6119162 6119173 chr3L 6119259 6119270 5 97 4.0 12.0 8.0 0.6 108 chr3L 6119162 intron Ets65A + chr3L 6119216 intron Ets65A + chr3L 6119270 intron Ets65A + chr3L_5_6115001 chr3L_6115001 RAL-406 1430 chr3L 6155676 6155713 chr3L 6155782 6155819 16 101 7.5 4.5 6.0 2.3 143 chr3L 6155676 intergenic CR45421 - chr3L 6155748 intergenic not near genes chr3L 6155819 intergenic not near genes chr3L_16_6155001 chr3L_6155001 RAL-406 1431 chr3L 6159851 6159897 chr3L 6159959 6160004 14 107 3.5 9.0 6.2 1.9 153 chr3L 6159851 intergenic not near genes chr3L 6159928 intergenic not near genes chr3L 6160004 intergenic not near genes chr3L_14_6155001 chr3L_6155001 RAL-406 1432 chr3L 6185588 6185617 chr3L 6185686 6185715 16 97 11.5 11.5 11.5 1.3 127 chr3L 6185588 exon CG43293 + chr3L 6185652 intron CG43293 + chr3L 6185715 exon CG43293 + chr3L_16_6185001 chr3L_6185001 RAL-406 1433 chr3L 6185621 6185628 chr3L 6185678 6185726 6 90 9.0 10.0 9.5 0.6 105 chr3L 6185621 exon CG43293 + chr3L 6185674 intron CG43293 + chr3L 6185726 exon CG43293 + chr3L_6_6185001 chr3L_6185001 RAL-406 1434 chr3L 6220908 6220948 chr3L 6230075 6230120 roo 13 9165 6.5 7.5 7.0 1.6 9212 chr3L 6220908 5` UTR pncr008:3L + chr3L 6225514 intergenic not near genes chr3L 6230120 intergenic not near genes chr3L_13_6225001 chr3L_6225001 RAL-406 1435 chr3L 6334997 6335042 chr3L 6335479 6335523 297 9 486 2.0 7.0 4.5 1.6 526 chr3L 6334997 intron CG13300 - chr3L 6335260 intron CG13300 - chr3L 6335523 intron CG13300 - chr3L_9_6335001 chr3L_6335001 RAL-406 1436 chr3L 6362368 6362407 chr3L 6362465 6362504 12 96 5.5 1.5 3.5 2.7 136 chr3L 6362368 intergenic not near genes chr3L 6362436 intergenic not near genes chr3L 6362504 intergenic not near genes chr3L_12_6360001 chr3L_6360001 RAL-406 1437 chr3L 6369736 6369743 chr3L 6369871 6369878 4 135 4.5 1.5 3.0 1.0 142 chr3L 6369736 intergenic CR45419 - chr3L 6369807 intergenic CR45419 - chr3L 6369878 intergenic CR45419 - chr3L_4_6365001 chr3L_6365001 RAL-406 1438 chr3L 6372711 6372754 chr3L 6372825 6372870 11 113 5.5 5.5 5.5 1.7 159 chr3L 6372711 intergenic not near genes chr3L 6372790 intergenic not near genes chr3L 6372870 intergenic not near genes chr3L_11_6370001 chr3L_6370001 RAL-406 1439 chr3L 6405637 6405686 chr3L 6432121 6432170 roo 30 26480 7.0 7.5 7.2 3.7 26533 chr3L 6405637 intron CG42747 + chr3L 6418904 intron CG42747 + chr3L 6432170 intron CG42747 + chr3L_30_6415001 chr3L_6415001 RAL-406 1440 chr3L 6497756 6497771 chr3L 6498073 6498089 4 316 4.0 6.0 5.0 0.7 333 chr3L 6497756 intron sfl + chr3L 6497922 intron sfl + chr3L 6498089 intron sfl + chr3L_4_6495001 chr3L_6495001 RAL-406 1441 chr3L 6555741 6555859 chr3L 6555840 6555957 19 98 0.0 0.0 0.0 19.0 216 chr3L 6555741 intron CG18769 + chr3L 6555849 intron CG18769 + chr3L 6555957 intron CG18769 + chr3L_19_6555001 chr3L_6555001 RAL-406 1442 chr3L 6562833 6562869 chr3L 6562923 6562969 18 94 11.5 5.5 8.5 1.9 136 chr3L 6562833 intron CG18769 + chr3L 6562901 intron CG18769 + chr3L 6562969 intron CG18769 + chr3L_18_6560001 chr3L_6560001 RAL-406 1443 chr3L 6625396 6625436 chr3L 6625570 6625619 6 182 6.0 4.0 5.0 1.0 223 chr3L 6625396 intron GluRIA + chr3L 6625508 intron GluRIA + chr3L 6625619 intron GluRIA + chr3L_6_6625001 chr3L_6625001 RAL-406 1444 chr3L 6650224 6650272 chr3L 6650321 6650324 5 78 6.5 6.5 6.5 0.7 100 chr3L 6650224 intergenic not near genes chr3L 6650274 intergenic not near genes chr3L 6650324 intergenic not near genes chr3L_5_6650001 chr3L_6650001 RAL-406 1445 chr3L 6781108 6781153 chr3L 6783141 6783183 Doc 16 2031 5.5 0.0 2.8 4.2 2075 chr3L 6781108 intergenic not near genes chr3L 6782146 intergenic not near genes chr3L 6783183 intergenic not near genes chr3L_16_6780001 chr3L_6780001 RAL-406 1446 chr3L 6842984 6843009 chr3L 6843097 6843147 11 129 0.0 3.5 1.8 3.9 163 chr3L 6842984 intergenic not near genes chr3L 6843066 intergenic not near genes chr3L 6843147 intergenic not near genes chr3L_11_6840001 chr3L_6840001 RAL-406 1447 chr3L 6855922 6855950 chr3L 6860718 6860728 Doc 7 4788 3.5 1.5 2.5 2.0 4806 chr3L 6855922 intergenic not near genes chr3L 6858325 intergenic not near genes chr3L 6860728 intergenic not near genes chr3L_7_6855001 chr3L_6855001 RAL-406 1448 chr3L 6868699 6868741 chr3L 6868796 6868834 9 96 0.5 8.0 4.2 1.7 135 chr3L 6868699 intergenic not near genes chr3L 6868766 intergenic not near genes chr3L 6868834 intergenic not near genes chr3L_9_6865001 chr3L_6865001 RAL-406 1449 chr3L 6887496 6887542 chr3L 6895008 6895054 roo 29 7510 8.5 5.5 7.0 3.6 7558 chr3L 6887496 intergenic not near genes chr3L 6891275 intergenic not near genes chr3L 6895054 intergenic not near genes chr3L_29_6890001 chr3L_6890001 RAL-406 1450 chr3L 6908001 6908045 chr3L 6908101 6908143 8 98 9.5 0.0 4.8 1.4 142 chr3L 6908001 intergenic not near genes chr3L 6908072 intergenic not near genes chr3L 6908143 intergenic not near genes chr3L_8_6905001 chr3L_6905001 RAL-406 1451 chr3L 6934317 6934363 chr3L 6934448 6934454 13 128 4.5 4.5 4.5 2.4 137 chr3L 6934317 exon CG14820 + chr3L 6934386 intron CG14820 + chr3L 6934454 intron CG14820 + chr3L_13_6930001 chr3L_6930001 RAL-406 1452 chr3L 6937225 6937245 chr3L 6937344 6937378 5 118 6.0 3.5 4.8 0.9 153 chr3L 6937225 5` UTR CR45414 + chr3L 6937302 5` UTR CR45414 + chr3L 6937378 5` UTR CR45414 + chr3L_5_6935001 chr3L_6935001 RAL-406 1453 chr3L 6974486 6974518 chr3L 6974600 6974607 7 107 1.5 6.5 4.0 1.4 121 chr3L 6974486 intron Galphai - chr3L 6974546 intron Galphai - chr3L 6974607 intron Galphai - chr3L_7_6970001 chr3L_6970001 RAL-406 1454 chr3L 6994892 6994910 chr3L 6995522 6995539 BS 6 630 2.5 4.0 3.2 1.4 647 chr3L 6994892 intergenic bin + chr3L 6995216 intergenic not near genes chr3L 6995539 intergenic not near genes chr3L_6_6995001 chr3L_6995001 RAL-406 1455 chr3L 7007367 7007379 chr3L 7007477 7007494 4 111 0.0 9.0 4.5 0.7 127 chr3L 7007367 intron Mp + chr3L 7007430 intron Mp + chr3L 7007494 intron Mp + chr3L_4_7005001 chr3L_7005001 RAL-406 1456 chr3L 7007380 7007394 chr3L 7007470 7007509 7 111 0.0 7.0 3.5 1.6 129 chr3L 7007380 intron Mp + chr3L 7007444 intron Mp + chr3L 7007509 intron Mp + chr3L_7_7005001 chr3L_7005001 RAL-406 1457 chr3L 7013439 7013472 chr3L 7013547 7013595 7 114 6.5 0.0 3.2 1.7 156 chr3L 7013439 intron Mp + chr3L 7013517 intron Mp + chr3L 7013595 intron Mp + chr3L_7_7010001 chr3L_7010001 RAL-406 1458 chr3L 7061389 7061401 chr3L 7061493 7061505 4 104 8.5 2.5 5.5 0.6 116 chr3L 7061389 intron CG8641 - chr3L 7061447 intron CG8641 - chr3L 7061505 intron CG8641 - chr3L_4_7060001 chr3L_7060001 RAL-406 1459 chr3L 7112565 7112612 chr3L 7112671 7112713 12 106 6.0 7.5 6.8 1.5 148 chr3L 7112565 intron form3 + chr3L 7112639 intron form3 + chr3L 7112713 intron form3 + chr3L_12_7110001 chr3L_7110001 RAL-406 1460 chr3L 7150870 7150894 chr3L 7150960 7150990 11 93 2.5 7.0 4.8 1.9 120 chr3L 7150870 intron corn - chr3L 7150930 intron corn - chr3L 7150990 intron corn - chr3L_11_7150001 chr3L_7150001 RAL-406 1461 chr3L 7187386 7187423 chr3L 7187488 7187520 14 98 0.5 0.5 0.5 9.3 134 chr3L 7187386 intron Dscam2 - chr3L 7187453 intron Dscam2 - chr3L 7187520 intron Dscam2 - chr3L_14_7185001 chr3L_7185001 RAL-406 1462 chr3L 7216095 7216144 chr3L 7216193 7216235 4 82 5.0 5.5 5.2 0.6 140 chr3L 7216095 intergenic not near genes chr3L 7216165 intergenic not near genes chr3L 7216235 intergenic not near genes chr3L_4_7215001 chr3L_7215001 RAL-406 1463 chr3L 7377304 7377344 chr3L 7380423 7380448 297 12 3116 3.5 6.5 5.0 2.0 3144 chr3L 7377304 intron SMSr - chr3L 7378876 intron SMSr - chr3L 7380448 intron SMSr - chr3L_12_7375001 chr3L_7375001 RAL-406 1464 chr3L 7450679 7450716 chr3L 7450782 7450816 11 96 7.5 3.5 5.5 1.7 137 chr3L 7450679 intron CG42458 + chr3L 7450748 intron CG42458 + chr3L 7450816 intron CG42458 + chr3L_11_7450001 chr3L_7450001 RAL-406 1465 chr3L 7455299 7455302 chr3L 7455407 7455435 4 127 0.0 16.0 8.0 0.4 136 chr3L 7455299 intergenic not near genes chr3L 7455367 intergenic not near genes chr3L 7455435 intergenic not near genes chr3L_4_7455001 chr3L_7455001 RAL-406 1466 chr3L 7498742 7498748 chr3L 7503539 7503545 F-element 5 4797 20.0 11.0 15.5 0.3 4803 chr3L 7498742 5` UTR CG8539 - chr3L 7501144 intergenic not near genes chr3L 7503545 intergenic not near genes chr3L_5_7500001 chr3L_7500001 RAL-406 1467 chr3L 7498753 7498773 chr3L 7503534 7503570 F-element 16 4795 16.0 10.0 13.0 1.1 4817 chr3L 7498753 5` UTR CG8539 - chr3L 7501162 intergenic not near genes chr3L 7503570 intergenic not near genes chr3L_16_7500001 chr3L_7500001 RAL-406 1468 chr3L 7505399 7505443 chr3L 7505495 7505539 15 96 6.0 9.0 7.5 1.8 140 chr3L 7505399 intergenic CG7548 - chr3L 7505469 intergenic CG7548 - chr3L 7505539 3` UTR CG7548 - chr3L_15_7505001 chr3L_7505001 RAL-406 1469 chr3L 7572273 7572306 chr3L 7572371 7572393 8 96 5.0 3.5 4.2 1.5 120 chr3L 7572273 intergenic not near genes chr3L 7572333 intergenic not near genes chr3L 7572393 intergenic not near genes chr3L_8_7570001 chr3L_7570001 RAL-406 1470 chr3L 7591132 7591175 chr3L 7591241 7591259 7 100 7.0 3.5 5.2 1.1 127 chr3L 7591132 intergenic CG7716 - chr3L 7591196 intergenic CG7716 - chr3L 7591259 intergenic CG7716 - chr3L_7_7590001 chr3L_7590001 RAL-406 1471 chr3L 7591894 7591927 chr3L 7591975 7592024 9 90 2.0 4.5 3.2 2.1 130 chr3L 7591894 intergenic not near genes chr3L 7591959 intergenic not near genes chr3L 7592024 intergenic not near genes chr3L_9_7590001 chr3L_7590001 RAL-406 1472 chr3L 7739880 7739911 chr3L 7740106 7740117 7 222 5.5 4.0 4.8 1.2 237 chr3L 7739880 intron,intron CG32373 +,Snmp2 - chr3L 7739998 intron,intron CG32373 +,Snmp2 - chr3L 7740117 intron,intron CG32373 +,Snmp2 - chr3L_7_7740001 chr3L_7740001 RAL-406 1473 chr3L 7745662 7745668 chr3L 7745952 7745953 5 292 11.5 6.0 8.8 0.5 291 chr3L 7745662 intron CG32373 + chr3L 7745808 intron CG32373 + chr3L 7745953 intron CG32373 + chr3L_5_7745001 chr3L_7745001 RAL-406 1474 chr3L 7745670 7745696 chr3L 7745951 7745971 7 280 6.0 6.0 6.0 1.0 301 chr3L 7745670 intron CG32373 + chr3L 7745820 intron CG32373 + chr3L 7745971 intron CG32373 + chr3L_7_7745001 chr3L_7745001 RAL-406 1475 chr3L 7793698 7793742 chr3L 7800770 7800809 297 26 7070 6.0 11.5 8.8 2.7 7111 chr3L 7793698 intron CG32369 - chr3L 7797254 intron CG32369 - chr3L 7800809 intron CG32369 - chr3L_26_7795001 chr3L_7795001 RAL-406 1476 chr3L 7865554 7865570 chr3L 7865714 7865724 5 157 5.0 0.0 2.5 1.4 170 chr3L 7865554 intron Pdp1 - chr3L 7865639 intron Pdp1 - chr3L 7865724 intron Pdp1 - chr3L_5_7865001 chr3L_7865001 RAL-406 1477 chr3L 7876083 7876094 chr3L 7876182 7876193 9 99 0.5 1.0 0.8 5.0 110 chr3L 7876083 intron CG32365 + chr3L 7876138 intron CG32365 + chr3L 7876193 intron CG32365 + chr3L_9_7875001 chr3L_7875001 RAL-406 1478 chr3L 7876102 7876128 chr3L 7876181 7876227 12 95 0.5 1.0 0.8 6.7 125 chr3L 7876102 intron CG32365 + chr3L 7876164 intron CG32365 + chr3L 7876227 intron CG32365 + chr3L_12_7875001 chr3L_7875001 RAL-406 1479 chr3L 7878103 7878147 chr3L 7878389 7878429 8 278 2.5 0.5 1.5 3.2 326 chr3L 7878103 intron CG32365 + chr3L 7878266 intron CG32365 + chr3L 7878429 intron CG32365 + chr3L_8_7875001 chr3L_7875001 RAL-406 1480 chr3L 7886520 7886543 chr3L 7889052 7889076 Stalker4 6 2536 1.5 3.5 2.5 1.7 2556 chr3L 7886520 intron CG32365 + chr3L 7887798 intron CG32365 + chr3L 7889076 intron CG32365 + chr3L_6_7885001 chr3L_7885001 RAL-406 1481 chr3L 7916818 7916859 chr3L 7926009 7926050 roo 17 9189 5.0 7.5 6.2 2.4 9232 chr3L 7916818 3` UTR syd - chr3L 7921434 intron syd - chr3L 7926050 3` UTR syd - chr3L_17_7920001 chr3L_7920001 RAL-406 1482 chr3L 7949272 7949290 chr3L 7949345 7949386 11 92 0.5 6.0 3.2 2.6 114 chr3L 7949272 exon exex + chr3L 7949329 intron exex + chr3L 7949386 intron exex + chr3L_11_7945001 chr3L_7945001 RAL-406 1483 chr3L 7985349 7985392 chr3L 7987697 7987710 NOF 21 2343 4.5 6.5 5.5 3.2 2361 chr3L 7985349 intron nmo + chr3L 7986530 intron nmo + chr3L 7987710 intron nmo + chr3L_21_7985001 chr3L_7985001 RAL-406 1484 chr3L 8062845 8062973 chr3L 8062944 8063124 9 123 4.5 5.0 4.8 1.6 279 chr3L 8062845 intergenic not near genes chr3L 8062984 intergenic not near genes chr3L 8063124 intergenic not near genes chr3L_9_8060001 chr3L_8060001 RAL-406 1485 chr3L 8208107 8208146 chr3L 8208259 8208264 11 141 4.0 3.5 3.8 2.3 157 chr3L 8208107 intergenic not near genes chr3L 8208186 intergenic not near genes chr3L 8208264 intergenic not near genes chr3L_11_8205001 chr3L_8205001 RAL-406 1486 chr3L 8210791 8210800 chr3L 8210926 8210935 5 134 7.0 4.5 5.8 0.7 144 chr3L 8210791 intergenic CG32364 - chr3L 8210863 intergenic CG32364 - chr3L 8210935 intergenic CG32364 - chr3L_5_8210001 chr3L_8210001 RAL-406 1487 chr3L 8210801 8210808 chr3L 8210919 8210941 6 129 5.5 3.0 4.2 1.2 140 chr3L 8210801 intergenic CG32364 - chr3L 8210871 intergenic CG32364 - chr3L 8210941 intergenic CG32364 - chr3L_6_8210001 chr3L_8210001 RAL-406 1488 chr3L 8226699 8226730 chr3L 8226818 8226849 8 118 3.5 0.0 1.8 2.9 150 chr3L 8226699 intergenic not near genes chr3L 8226774 intergenic not near genes chr3L 8226849 intergenic not near genes chr3L_8_8225001 chr3L_8225001 RAL-406 1489 chr3L 8295770 8295822 chr3L 8295948 8296000 24 175 7.0 4.0 5.5 3.7 230 chr3L 8295770 intergenic CG7201 - chr3L 8295885 intergenic not near genes chr3L 8296000 intergenic not near genes chr3L_24_8295001 chr3L_8295001 RAL-406 1490 chr3L 8314758 8314767 chr3L 8314856 8314875 4 108 1.5 12.0 6.8 0.5 117 chr3L 8314758 intron CG7185 - chr3L 8314816 intron CG7185 - chr3L 8314875 intron CG7185 - chr3L_4_8310001 chr3L_8310001 RAL-406 1491 chr3L 8395829 8395869 chr3L 8395932 8395945 7 94 2.5 1.5 2.0 2.3 116 chr3L 8395829 intergenic CG7120 + chr3L 8395887 intergenic CG7120 + chr3L 8395945 intergenic CG7120 + chr3L_7_8395001 chr3L_8395001 RAL-406 1492 chr3L 8413821 8413870 chr3L 8413920 8413969 8 99 12.0 2.0 7.0 1.0 148 chr3L 8413821 intron,3` UTR Exo70 +,mtrm + chr3L 8413895 intron,3` UTR Exo70 +,mtrm + chr3L 8413969 intron,3` UTR Exo70 +,mtrm + chr3L_8_8410001 chr3L_8410001 RAL-406 1493 chr3L 8619491 8619544 chr3L 8619599 8619641 22 105 8.5 6.0 7.2 2.7 150 chr3L 8619491 intergenic S-Lap1 +,S-Lap2 + chr3L 8619566 intergenic S-Lap1 +,S-Lap2 + chr3L 8619641 intergenic S-Lap1 +,S-Lap2 + chr3L_22_8615001 chr3L_8615001 RAL-406 1494 chr3L 8752396 8752406 chr3L 8752604 8752613 5 208 8.0 2.5 5.2 0.8 217 chr3L 8752396 intergenic not near genes chr3L 8752504 intergenic not near genes chr3L 8752613 intergenic not near genes chr3L_5_8750001 chr3L_8750001 RAL-406 1495 chr3L 8752408 8752418 chr3L 8752603 8752626 8 202 5.0 2.5 3.8 1.7 218 chr3L 8752408 intergenic not near genes chr3L 8752517 intergenic not near genes chr3L 8752626 intergenic not near genes chr3L_8_8750001 chr3L_8750001 RAL-406 1496 chr3L 8784839 8784850 chr3L 8784942 8784953 4 101 3.5 3.5 3.5 0.9 114 chr3L 8784839 intron Fhos + chr3L 8784896 intron Fhos + chr3L 8784953 intron Fhos + chr3L_4_8780001 chr3L_8780001 RAL-406 1497 chr3L 8784853 8784860 chr3L 8784941 8784963 5 100 2.5 3.5 3.0 1.2 110 chr3L 8784853 intron Fhos + chr3L 8784908 intron Fhos + chr3L 8784963 intron Fhos + chr3L_5_8780001 chr3L_8780001 RAL-406 1498 chr3L 8791274 8791292 chr3L 8796699 8796710 I-element 5 5425 6.0 1.0 3.5 1.1 5436 chr3L 8791274 exon Fhos + chr3L 8793992 intron Fhos + chr3L 8796710 intron Fhos + chr3L_5_8790001 chr3L_8790001 RAL-406 1499 chr3L 8791297 8791309 chr3L 8796692 8796748 I-element 7 5433 4.5 1.0 2.8 1.8 5451 chr3L 8791297 exon Fhos + chr3L 8794022 intron Fhos + chr3L 8796748 intron Fhos + chr3L_7_8790001 chr3L_8790001 RAL-406 1500 chr3L 8839716 8839751 chr3L 8839816 8839826 17 94 6.0 1.0 3.5 3.8 110 chr3L 8839716 intron dally + chr3L 8839771 intron dally + chr3L 8839826 intron dally + chr3L_17_8835001 chr3L_8835001 RAL-406 1501 chr3L 8846089 8846124 chr3L 8846193 8846229 8 102 8.5 0.0 4.2 1.5 140 chr3L 8846089 intron dally + chr3L 8846159 intron dally + chr3L 8846229 intron dally + chr3L_8_8845001 chr3L_8845001 RAL-406 1502 chr3L 8861516 8861528 chr3L 8861627 8861628 4 108 4.5 4.0 4.2 0.8 112 chr3L 8861516 intron dally + chr3L 8861572 intron dally + chr3L 8861628 intron dally + chr3L_4_8860001 chr3L_8860001 RAL-406 1503 chr3L 8861535 8861553 chr3L 8861618 8861664 9 107 2.0 3.5 2.8 2.4 129 chr3L 8861535 intron dally + chr3L 8861600 intron dally + chr3L 8861664 intron dally + chr3L_9_8860001 chr3L_8860001 RAL-406 1504 chr3L 8928250 8928297 chr3L 8928346 8928393 13 96 2.0 5.5 3.8 2.7 143 chr3L 8928250 intron Tsp66E + chr3L 8928322 intron Tsp66E + chr3L 8928393 intron Tsp66E + chr3L_13_8925001 chr3L_8925001 RAL-406 1505 chr3L 8949380 8949509 chr3L 8949497 8949610 7 105 0.0 0.0 0.0 7.0 230 chr3L 8949380 intron,intron CG43783 -,orb2 - chr3L 8949495 intron,intron CG43783 -,orb2 - chr3L 8949610 intron,intron CG43783 -,orb2 - chr3L_7_8945001 chr3L_8945001 RAL-406 1506 chr3L 8950536 8950549 chr3L 8950650 8950653 5 112 13.5 2.0 7.8 0.6 117 chr3L 8950536 intron,intron CG43783 -,orb2 - chr3L 8950594 intron,intron CG43783 -,orb2 - chr3L 8950653 intron,intron CG43783 -,orb2 - chr3L_5_8950001 chr3L_8950001 RAL-406 1507 chr3L 8950550 8950582 chr3L 8950649 8950694 11 107 9.0 2.0 5.5 1.7 144 chr3L 8950550 intron,intron CG43783 -,orb2 - chr3L 8950622 intron,intron CG43783 -,orb2 - chr3L 8950694 intron,intron CG43783 -,orb2 - chr3L_11_8950001 chr3L_8950001 RAL-406 1508 chr3L 9003943 9003978 chr3L 9004034 9004078 15 99 2.5 8.5 5.5 2.3 135 chr3L 9003943 intergenic not near genes chr3L 9004010 intergenic not near genes chr3L 9004078 intergenic not near genes chr3L_15_9000001 chr3L_9000001 RAL-406 1509 chr3L 9005591 9005638 chr3L 9005696 9005742 8 104 0.0 3.5 1.8 2.9 151 chr3L 9005591 exon Doc3 + chr3L 9005666 intron Doc3 + chr3L 9005742 intron Doc3 + chr3L_8_9005001 chr3L_9005001 RAL-406 1510 chr3L 9008632 9008642 chr3L 9008735 9008745 6 103 7.5 4.5 6.0 0.9 113 chr3L 9008632 3` UTR CG5194 - chr3L 9008688 3` UTR CG5194 - chr3L 9008745 3` UTR CG5194 - chr3L_6_9005001 chr3L_9005001 RAL-406 1511 chr3L 9008643 9008674 chr3L 9008725 9008761 10 93 3.0 3.5 3.2 2.4 118 chr3L 9008643 3` UTR CG5194 - chr3L 9008702 3` UTR CG5194 - chr3L 9008761 exon CG5194 - chr3L_10_9005001 chr3L_9005001 RAL-406 1512 chr3L 9076908 9076951 chr3L 9084487 9084514 412 13 7575 3.0 5.0 4.0 2.6 7606 chr3L 9076908 exon Tequila + chr3L 9080711 intron Tequila + chr3L 9084514 exon Tequila + chr3L_13_9080001 chr3L_9080001 RAL-406 1513 chr3L 9086898 9086910 chr3L 9087001 9087002 4 100 9.5 11.0 10.2 0.4 104 chr3L 9086898 exon Tequila + chr3L 9086950 exon Tequila + chr3L 9087002 exon Tequila + chr3L_4_9085001 chr3L_9085001 RAL-406 1514 chr3L 9128180 9128216 chr3L 9128285 9128321 10 100 8.0 8.0 8.0 1.1 141 chr3L 9128180 intron bol - chr3L 9128250 intron bol - chr3L 9128321 intron bol - chr3L_10_9125001 chr3L_9125001 RAL-406 1515 chr3L 9164680 9164703 chr3L 9166167 9166190 hobo 4 1486 6.5 1.0 3.8 0.8 1510 chr3L 9164680 intron Rdl - chr3L 9165435 intron Rdl - chr3L 9166190 intron Rdl - chr3L_4_9165001 chr3L_9165001 RAL-406 1516 chr3L 9164705 9164713 chr3L 9166161 9166200 hobo 4 1476 4.5 1.0 2.8 1.1 1495 chr3L 9164705 intron Rdl - chr3L 9165452 intron Rdl - chr3L 9166200 intron Rdl - chr3L_4_9165001 chr3L_9165001 RAL-406 1517 chr3L 9167275 9167305 chr3L 9167366 9167404 15 97 4.0 4.5 4.2 2.9 129 chr3L 9167275 intron Rdl - chr3L 9167340 intron Rdl - chr3L 9167404 intron Rdl - chr3L_15_9165001 chr3L_9165001 RAL-406 1518 chr3L 9219244 9219265 chr3L 9219916 9219946 jockey 8 675 7.5 4.0 5.8 1.2 702 chr3L 9219244 intergenic not near genes chr3L 9219595 intergenic not near genes chr3L 9219946 intergenic not near genes chr3L_8_9215001 chr3L_9215001 RAL-406 1519 chr3L 9232846 9232874 chr3L 9232937 9232970 12 91 4.5 10.0 7.2 1.5 124 chr3L 9232846 intergenic not near genes chr3L 9232908 intergenic not near genes chr3L 9232970 intergenic not near genes chr3L_12_9230001 chr3L_9230001 RAL-406 1520 chr3L 9234523 9234552 chr3L 9234754 9234783 4 228 3.5 6.5 5.0 0.7 260 chr3L 9234523 intergenic not near genes chr3L 9234653 intergenic CG4483 - chr3L 9234783 intergenic CG4483 - chr3L_4_9230001 chr3L_9230001 RAL-406 1521 chr3L 9270616 9270645 chr3L 9278386 9278416 roo 7 7768 8.0 3.0 5.5 1.1 7800 chr3L 9270616 intron GluRIB + chr3L 9274516 intron GluRIB + chr3L 9278416 exon GluRIB + chr3L_7_9270001 chr3L_9270001 RAL-406 1522 chr3L 9312707 9312728 chr3L 9312805 9312816 6 96 6.0 7.5 6.8 0.8 109 chr3L 9312707 intergenic not near genes chr3L 9312762 intergenic not near genes chr3L 9312816 intergenic not near genes chr3L_6_9310001 chr3L_9310001 RAL-406 1523 chr3L 9344195 9344221 chr3L 9344286 9344313 8 90 0.0 8.5 4.2 1.5 118 chr3L 9344195 intron PGRP-LC + chr3L 9344254 intron PGRP-LC + chr3L 9344313 intron PGRP-LC + chr3L_8_9340001 chr3L_9340001 RAL-406 1524 chr3L 9344222 9344225 chr3L 9344275 9344304 4 76 0.0 5.5 2.8 1.1 82 chr3L 9344222 intron PGRP-LC + chr3L 9344263 intron PGRP-LC + chr3L 9344304 intron PGRP-LC + chr3L_4_9340001 chr3L_9340001 RAL-406 1525 chr3L 9359569 9359618 chr3L 9359680 9359729 24 108 6.0 6.0 6.0 3.4 160 chr3L 9359569 3` UTR CG32039 + chr3L 9359649 3` UTR CG32039 + chr3L 9359729 3` UTR CG32039 + chr3L_24_9355001 chr3L_9355001 RAL-406 1526 chr3L 9443495 9443535 chr3L 9445306 9445346 S-element 13 1806 9.0 9.0 9.0 1.3 1851 chr3L 9443495 intron CG33926 + chr3L 9444420 intron CG33926 + chr3L 9445346 intron CG33926 + chr3L_13_9440001 chr3L_9440001 RAL-406 1527 chr3L 9526495 9526503 chr3L 9528190 9528203 Doc 4 1697 0.0 0.0 0.0 4.0 1708 chr3L 9526495 intergenic not near genes chr3L 9527349 intergenic not near genes chr3L 9528203 intergenic not near genes chr3L_4_9525001 chr3L_9525001 RAL-406 1528 chr3L 9571887 9571928 chr3L 9572255 9572286 jockey 15 366 10.0 10.0 10.0 1.4 399 chr3L 9571887 intron CG42673 + chr3L 9572086 intron CG42673 + chr3L 9572286 intron CG42673 + chr3L_15_9570001 chr3L_9570001 RAL-406 1529 chr3L 9575891 9575922 chr3L 9580989 9581002 jockey 9 5091 6.5 4.5 5.5 1.4 5111 chr3L 9575891 intron CG42673 + chr3L 9578446 intron CG42673 + chr3L 9581002 intron CG42673 + chr3L_9_9575001 chr3L_9575001 RAL-406 1530 chr3L 9575928 9575940 chr3L 9580983 9581037 jockey 4 5080 5.5 2.5 4.0 0.8 5109 chr3L 9575928 intron CG42673 + chr3L 9578482 intron CG42673 + chr3L 9581037 intron CG42673 + chr3L_4_9575001 chr3L_9575001 RAL-406 1531 chr3L 9637836 9637850 chr3L 9637937 9637952 4 102 7.5 3.0 5.2 0.6 116 chr3L 9637836 intron fry - chr3L 9637894 intron fry - chr3L 9637952 intron fry - chr3L_4_9635001 chr3L_9635001 RAL-406 1532 chr3L 9637853 9637885 chr3L 9637935 9637986 11 99 3.5 2.5 3.0 2.8 133 chr3L 9637853 intron fry - chr3L 9637920 intron fry - chr3L 9637986 intron fry - chr3L_11_9635001 chr3L_9635001 RAL-406 1533 chr3L 9639033 9639059 chr3L 9639138 9639163 14 105 0.0 8.5 4.2 2.7 130 chr3L 9639033 intron fry - chr3L 9639098 intron fry - chr3L 9639163 intron fry - chr3L_14_9635001 chr3L_9635001 RAL-406 1534 chr3L 9645743 9645791 chr3L 9645931 9645977 18 184 6.5 6.0 6.2 2.5 234 chr3L 9645743 intron,intron fry -,CG33696 + chr3L 9645860 intron,intron fry -,CG33696 + chr3L 9645977 intron,intron fry -,CG33696 + chr3L_18_9645001 chr3L_9645001 RAL-406 1535 chr3L 9741602 9741655 chr3L 9741714 9741767 17 111 2.5 4.5 3.5 3.8 165 chr3L 9741602 intron,intron CG42268 -,CR44348 + chr3L 9741684 intron,intron CG42268 -,CR44348 + chr3L 9741767 intron,intron CG42268 -,CR44348 + chr3L_17_9740001 chr3L_9740001 RAL-406 1536 chr3L 9775347 9775398 chr3L 9775726 9775777 10 379 0.5 1.5 1.0 5.0 430 chr3L 9775347 intron CG8177 + chr3L 9775562 intron CG8177 + chr3L 9775777 intron CG8177 + chr3L_10_9775001 chr3L_9775001 RAL-406 1537 chr3L 9831716 9831738 chr3L 9831817 9831839 8 101 0.5 17.0 8.8 0.8 123 chr3L 9831716 intron CG43897 + chr3L 9831778 intron CG43897 + chr3L 9831839 intron CG43897 + chr3L_8_9830001 chr3L_9830001 RAL-406 1538 chr3L 9848503 9848532 chr3L 9848594 9848628 5 86 6.5 0.0 3.2 1.2 125 chr3L 9848503 intron RasGAP1 - chr3L 9848566 intron RasGAP1 - chr3L 9848628 intron RasGAP1 - chr3L_5_9845001 chr3L_9845001 RAL-406 1539 chr3L 9848537 9848539 chr3L 9848592 9848595 4 58 5.0 0.0 2.5 1.1 58 chr3L 9848537 intron RasGAP1 - chr3L 9848566 intron RasGAP1 - chr3L 9848595 intron RasGAP1 - chr3L_4_9845001 chr3L_9845001 RAL-406 1540 chr3L 9918864 9918909 chr3L 9918974 9919024 13 109 4.5 4.5 4.5 2.4 160 chr3L 9918864 intron CG34356 + chr3L 9918944 intron CG34356 + chr3L 9919024 intron CG34356 + chr3L_13_9915001 chr3L_9915001 RAL-406 1541 chr3L 9929651 9929692 chr3L 9938450 9938470 roo 14 8796 4.5 6.0 5.2 2.3 8819 chr3L 9929651 intron CG34356 + chr3L 9934060 intron CG34356 + chr3L 9938470 intron CG34356 + chr3L_14_9930001 chr3L_9930001 RAL-406 1542 chr3L 9980255 9980293 chr3L 9980350 9980371 15 91 3.5 3.5 3.5 3.3 116 chr3L 9980255 intron dpr6 + chr3L 9980313 intron dpr6 + chr3L 9980371 intron dpr6 + chr3L_15_9980001 chr3L_9980001 RAL-406 1543 chr3L 9992702 9992735 chr3L 9992806 9992839 11 103 4.0 0.5 2.2 3.4 137 chr3L 9992702 intron dpr6 + chr3L 9992770 intron dpr6 + chr3L 9992839 intron dpr6 + chr3L_11_9990001 chr3L_9990001 RAL-406 1544 chr3L 10003130 10003181 chr3L 10003247 10003298 16 115 6.5 3.0 4.8 2.8 168 chr3L 10003130 intron dpr6 + chr3L 10003214 intron dpr6 + chr3L 10003298 intron dpr6 + chr3L_16_10000001 chr3L_10000001 RAL-406 1545 chr3L 10004087 10004114 chr3L 10004180 10004214 6 96 0.0 3.5 1.8 2.1 127 chr3L 10004087 exon dpr6 + chr3L 10004150 intron dpr6 + chr3L 10004214 intron dpr6 + chr3L_6_10000001 chr3L_10000001 RAL-406 1546 chr3L 10007171 10007206 chr3L 10007294 10007304 14 117 4.0 8.0 6.0 2.0 133 chr3L 10007171 intron dpr6 + chr3L 10007238 intron dpr6 + chr3L 10007304 intron dpr6 + chr3L_14_10005001 chr3L_10005001 RAL-406 1547 chr3L 10032551 10032558 chr3L 10032658 10032665 5 107 0.0 6.5 3.2 1.2 114 chr3L 10032551 intron dpr6 + chr3L 10032608 intron dpr6 + chr3L 10032665 intron dpr6 + chr3L_5_10030001 chr3L_10030001 RAL-406 1548 chr3L 10032559 10032564 chr3L 10032636 10032665 5 100 0.0 5.0 2.5 1.4 106 chr3L 10032559 intron dpr6 + chr3L 10032612 intron dpr6 + chr3L 10032665 intron dpr6 + chr3L_5_10030001 chr3L_10030001 RAL-406 1549 chr3L 10103873 10103883 chr3L 10103939 10103984 5 85 1.5 7.0 4.2 1.0 111 chr3L 10103873 intron dpr6 + chr3L 10103928 intron dpr6 + chr3L 10103984 intron dpr6 + chr3L_5_10100001 chr3L_10100001 RAL-406 1550 chr3L 10186658 10186673 chr3L 10186767 10186772 5 107 14.0 0.0 7.0 0.6 114 chr3L 10186658 intergenic not near genes chr3L 10186715 intergenic not near genes chr3L 10186772 intergenic not near genes chr3L_5_10185001 chr3L_10185001 RAL-406 1551 chr3L 10219216 10219258 chr3L 10219333 10219375 19 113 7.5 3.0 5.2 3.1 159 chr3L 10219216 exon CG32055 - chr3L 10219296 exon CG32055 - chr3L 10219375 exon CG32055 - chr3L_19_10215001 chr3L_10215001 RAL-406 1552 chr3L 10248960 10249135 chr3L 10249044 10249231 17 92 0.0 0.0 0.0 17.0 271 chr3L 10248960 intergenic CR44540 - chr3L 10249096 intergenic not near genes chr3L 10249231 intergenic not near genes chr3L_17_10245001 chr3L_10245001 RAL-406 1553 chr3L 10293945 10293954 chr3L 10294037 10294046 6 95 0.0 4.5 2.2 1.9 101 chr3L 10293945 intergenic not near genes chr3L 10293996 intergenic not near genes chr3L 10294046 intergenic not near genes chr3L_6_10290001 chr3L_10290001 RAL-406 1554 chr3L 10298653 10298701 chr3L 10298755 10298808 15 106 0.0 3.5 1.8 5.4 155 chr3L 10298653 intergenic not near genes chr3L 10298730 intergenic not near genes chr3L 10298808 intergenic not near genes chr3L_15_10295001 chr3L_10295001 RAL-406 1555 chr3L 10310329 10310381 chr3L 10310446 10310498 28 115 4.0 3.0 3.5 6.2 169 chr3L 10310329 intergenic not near genes chr3L 10310414 intergenic not near genes chr3L 10310498 intergenic not near genes chr3L_28_10310001 chr3L_10310001 RAL-406 1556 chr3L 10328097 10328127 chr3L 10328229 10328248 16 131 9.0 10.0 9.5 1.5 151 chr3L 10328097 intergenic not near genes chr3L 10328172 intergenic not near genes chr3L 10328248 intergenic not near genes chr3L_16_10325001 chr3L_10325001 RAL-406 1557 chr3L 10414938 10414973 chr3L 10417320 10417360 Doc 10 2385 1.5 4.5 3.0 2.5 2422 chr3L 10414938 intergenic CG12362 + chr3L 10416149 intergenic not near genes chr3L 10417360 intergenic not near genes chr3L_10_10415001 chr3L_10415001 RAL-406 1558 chr3L 10450677 10450716 chr3L 10450777 10450816 18 97 0.0 9.0 4.5 3.3 139 chr3L 10450677 intergenic not near genes chr3L 10450746 intergenic not near genes chr3L 10450816 intergenic not near genes chr3L_18_10450001 chr3L_10450001 RAL-406 1559 chr3L 10479952 10479961 chr3L 10480049 10480058 6 97 4.0 1.5 2.8 1.6 106 chr3L 10479952 intergenic not near genes chr3L 10480005 intergenic not near genes chr3L 10480058 intergenic not near genes chr3L_6_10480001 chr3L_10480001 RAL-406 1560 chr3L 10514304 10514344 chr3L 10514404 10514413 10 97 1.0 4.5 2.8 2.6 109 chr3L 10514304 intron A2bp1 + chr3L 10514358 intron A2bp1 + chr3L 10514413 intron A2bp1 + chr3L_10_10510001 chr3L_10510001 RAL-406 1561 chr3L 10551452 10551475 chr3L 10551549 10551571 12 96 9.5 9.5 9.5 1.1 119 chr3L 10551452 intron A2bp1 + chr3L 10551512 intron A2bp1 + chr3L 10551571 intron A2bp1 + chr3L_12_10550001 chr3L_10550001 RAL-406 1562 chr3L 10584260 10584270 chr3L 10584367 10584377 4 107 11.5 5.5 8.5 0.4 117 chr3L 10584260 intron A2bp1 + chr3L 10584318 intron A2bp1 + chr3L 10584377 intron A2bp1 + chr3L_4_10580001 chr3L_10580001 RAL-406 1563 chr3L 10584281 10584297 chr3L 10584366 10584404 6 101 8.0 5.5 6.8 0.8 123 chr3L 10584281 intron A2bp1 + chr3L 10584342 intron A2bp1 + chr3L 10584404 intron A2bp1 + chr3L_6_10580001 chr3L_10580001 RAL-406 1564 chr3L 10600438 10600477 chr3L 10600540 10600574 11 100 6.5 0.5 3.5 2.4 136 chr3L 10600438 intergenic not near genes chr3L 10600506 intergenic not near genes chr3L 10600574 intergenic not near genes chr3L_11_10600001 chr3L_10600001 RAL-406 1565 chr3L 10611303 10611342 chr3L 10611381 10611426 15 92 5.0 5.5 5.2 2.4 123 chr3L 10611303 intergenic not near genes chr3L 10611364 intergenic not near genes chr3L 10611426 intergenic not near genes chr3L_15_10610001 chr3L_10610001 RAL-406 1566 chr3L 10614750 10614793 chr3L 10614857 10614892 4 96 0.0 8.5 4.2 0.8 142 chr3L 10614750 intergenic not near genes chr3L 10614821 intergenic not near genes chr3L 10614892 intergenic not near genes chr3L_4_10610001 chr3L_10610001 RAL-406 1567 chr3L 10628462 10628502 chr3L 10628560 10628605 15 99 5.0 4.5 4.8 2.6 143 chr3L 10628462 5` UTR CG14151 - chr3L 10628534 intergenic CG14151 - chr3L 10628605 intergenic CG14151 -,CG42536 - chr3L_15_10625001 chr3L_10625001 RAL-406 1568 chr3L 10653326 10653355 chr3L 10653431 10653448 13 98 3.0 8.5 5.8 1.9 122 chr3L 10653326 intron CG32066 - chr3L 10653387 intron CG32066 - chr3L 10653448 intron CG32066 - chr3L_13_10650001 chr3L_10650001 RAL-406 1569 chr3L 10654961 10655004 chr3L 10655051 10655074 10 95 0.5 7.0 3.8 2.1 113 chr3L 10654961 intron CG32066 - chr3L 10655018 intron CG32066 - chr3L 10655074 intron CG32066 - chr3L_10_10655001 chr3L_10655001 RAL-406 1570 chr3L 10696357 10696406 chr3L 10696461 10696510 24 102 4.0 5.0 4.5 4.4 153 chr3L 10696357 intron NijA - chr3L 10696434 intron NijA - chr3L 10696510 intron NijA - chr3L_24_10695001 chr3L_10695001 RAL-406 1571 chr3L 10712285 10712313 chr3L 10712540 10712575 5 256 2.5 1.5 2.0 1.7 290 chr3L 10712285 intergenic not near genes chr3L 10712430 intergenic not near genes chr3L 10712575 intergenic not near genes chr3L_5_10710001 chr3L_10710001 RAL-406 1572 chr3L 10721420 10721424 chr3L 10721543 10721546 5 123 7.5 21.5 14.5 0.3 126 chr3L 10721420 intergenic not near genes chr3L 10721483 intergenic not near genes chr3L 10721546 intergenic not near genes chr3L_5_10720001 chr3L_10720001 RAL-406 1573 chr3L 10721976 10722016 chr3L 10722078 10722101 9 98 5.0 0.0 2.5 2.6 125 chr3L 10721976 intergenic not near genes chr3L 10722038 intergenic not near genes chr3L 10722101 intergenic not near genes chr3L_9_10720001 chr3L_10720001 RAL-406 1574 chr3L 10740940 10740940 chr3L 12160900 12160920 4 1419974 23.5 3.5 13.5 0.3 1419980 chr3L 10740940 intergenic not near genes chr3L 11450930 intergenic not near genes chr3L 12160920 intron CG9760 - chr3L_4_11450001 chr3L_11450001 RAL-406 1575 chr3L 10745520 10745568 chr3L 10745620 10745668 24 99 5.0 5.5 5.2 3.9 148 chr3L 10745520 intergenic not near genes chr3L 10745594 intergenic not near genes chr3L 10745668 intergenic not near genes chr3L_24_10745001 chr3L_10745001 RAL-406 1576 chr3L 10770488 10770504 chr3L 10770589 10770605 7 101 3.0 1.5 2.2 2.2 117 chr3L 10770488 intergenic not near genes chr3L 10770546 intergenic not near genes chr3L 10770605 intergenic not near genes chr3L_7_10770001 chr3L_10770001 RAL-406 1577 chr3L 10907966 10907993 chr3L 10908062 10908089 8 96 0.5 0.0 0.2 6.7 123 chr3L 10907966 intergenic not near genes chr3L 10908028 intergenic not near genes chr3L 10908089 intergenic not near genes chr3L_8_10905001 chr3L_10905001 RAL-406 1578 chr3L 10956436 10956466 chr3L 10956574 10956603 8 137 4.5 3.5 4.0 1.6 167 chr3L 10956436 intergenic not near genes chr3L 10956520 intergenic not near genes chr3L 10956603 intergenic not near genes chr3L_8_10955001 chr3L_10955001 RAL-406 1579 chr3L 10958217 10958223 chr3L 10958309 10958320 4 96 4.0 3.0 3.5 0.9 103 chr3L 10958217 intergenic not near genes chr3L 10958268 intergenic not near genes chr3L 10958320 intergenic not near genes chr3L_4_10955001 chr3L_10955001 RAL-406 1580 chr3L 11054969 11055019 chr3L 11055093 11055143 9 124 4.5 7.5 6.0 1.3 174 chr3L 11054969 intron CG7888 + chr3L 11055056 intron CG7888 + chr3L 11055143 intron CG7888 + chr3L_9_11055001 chr3L_11055001 RAL-406 1581 chr3L 11083487 11083536 chr3L 11083605 11083654 27 117 6.5 11.0 8.8 2.8 167 chr3L 11083487 intron JIL-1 - chr3L 11083570 intron JIL-1 - chr3L 11083654 intron JIL-1 - chr3L_27_11080001 chr3L_11080001 RAL-406 1582 chr3L 11085656 11085703 chr3L 11085759 11085771 20 99 6.0 5.0 5.5 3.1 115 chr3L 11085656 exon JIL-1 - chr3L 11085714 intron JIL-1 - chr3L 11085771 intron JIL-1 - chr3L_20_11085001 chr3L_11085001 RAL-406 1583 chr3L 11087079 11087088 chr3L 11088850 11088897 S-element 4 1797 2.0 2.0 2.0 1.3 1818 chr3L 11087079 intron JIL-1 - chr3L 11087988 intron JIL-1 - chr3L 11088897 intron JIL-1 - chr3L_4_11085001 chr3L_11085001 RAL-406 1584 chr3L 11090076 11090091 chr3L 11090177 11090199 11 105 4.5 12.0 8.2 1.2 123 chr3L 11090076 intron JIL-1 - chr3L 11090138 intron JIL-1 - chr3L 11090199 intron JIL-1 - chr3L_11_11090001 chr3L_11090001 RAL-406 1585 chr3L 11105275 11105323 chr3L 11107006 11107021 X-element 16 1725 5.0 3.5 4.2 3.1 1746 chr3L 11105275 intergenic not near genes chr3L 11106148 intergenic not near genes chr3L 11107021 3` UTR CG32073 - chr3L_16_11105001 chr3L_11105001 RAL-406 1586 chr3L 11135508 11135806 chr3L 11135758 11135908 22 160 1.0 1.0 1.0 11.0 400 chr3L 11135508 intergenic CG14143 + chr3L 11135708 intergenic CG14143 +,CG32082 + chr3L 11135908 intergenic CG32082 +,CG14143 + chr3L_22_11135001 chr3L_11135001 RAL-406 1587 chr3L 11145534 11145556 chr3L 11145639 11145661 9 107 0.0 5.0 2.5 2.6 127 chr3L 11145534 intron CG32082 + chr3L 11145598 intron CG32082 + chr3L 11145661 intron CG32082 + chr3L_9_11145001 chr3L_11145001 RAL-406 1588 chr3L 11187699 11187740 chr3L 11187800 11187841 14 101 1.0 7.5 4.2 2.7 142 chr3L 11187699 intron GlcAT-P - chr3L 11187770 intron GlcAT-P - chr3L 11187841 intron GlcAT-P - chr3L_14_11185001 chr3L_11185001 RAL-406 1589 chr3L 11241758 11241791 chr3L 11241860 11241893 11 101 1.0 2.5 1.8 3.9 135 chr3L 11241758 intergenic not near genes chr3L 11241826 intergenic not near genes chr3L 11241893 intergenic not near genes chr3L_11_11240001 chr3L_11240001 RAL-406 1590 chr3L 11247734 11247745 chr3L 11247832 11247843 5 98 6.5 3.5 5.0 0.8 109 chr3L 11247734 3` UTR CR44715 - chr3L 11247788 3` UTR CR44715 - chr3L 11247843 3` UTR CR44715 - chr3L_5_11245001 chr3L_11245001 RAL-406 1591 chr3L 11264442 11264490 chr3L 11271414 11271462 17.6 19 6972 2.5 5.0 3.8 4.0 7020 chr3L 11264442 intergenic not near genes chr3L 11267952 intergenic not near genes chr3L 11271462 intergenic not near genes chr3L_19_11265001 chr3L_11265001 RAL-406 1592 chr3L 11303027 11303042 chr3L 11303133 11303148 11 105 4.5 0.0 2.2 3.4 121 chr3L 11303027 intergenic not near genes chr3L 11303088 intergenic not near genes chr3L 11303148 intergenic not near genes chr3L_11_11300001 chr3L_11300001 RAL-406 1593 chr3L 11304819 11304833 chr3L 11304936 11304950 7 116 0.0 0.5 0.2 5.8 131 chr3L 11304819 intergenic not near genes chr3L 11304884 intergenic not near genes chr3L 11304950 intergenic not near genes chr3L_7_11300001 chr3L_11300001 RAL-406 1594 chr3L 11358468 11358515 chr3L 11358594 11358641 22 124 5.5 7.5 6.5 2.9 173 chr3L 11358468 intergenic not near genes chr3L 11358554 intergenic not near genes chr3L 11358641 intergenic not near genes chr3L_22_11355001 chr3L_11355001 RAL-406 1595 chr3L 11381561 11381602 chr3L 11381775 11381816 21 213 3.0 5.0 4.0 4.2 255 chr3L 11381561 intergenic not near genes chr3L 11381688 intergenic not near genes chr3L 11381816 intergenic not near genes chr3L_21_11380001 chr3L_11380001 RAL-406 1596 chr3L 11396612 11396619 chr3L 11396712 11396726 6 105 8.5 0.0 4.2 1.2 114 chr3L 11396612 intergenic not near genes chr3L 11396669 intergenic not near genes chr3L 11396726 intergenic not near genes chr3L_6_11395001 chr3L_11395001 RAL-406 1597 chr3L 11404812 11404853 chr3L 11404937 11404976 12 130 5.5 3.0 4.2 2.3 164 chr3L 11404812 intergenic not near genes chr3L 11404894 intergenic not near genes chr3L 11404976 intergenic not near genes chr3L_12_11400001 chr3L_11400001 RAL-406 1598 chr3L 11562502 11562504 chr3L 14578737 14578739 4 3016235 0.5 6.0 3.2 1.0 3016237 chr3L 11562502 intron CG7394 + chr3L 13070620 intergenic not near genes chr3L 14578739 intergenic not near genes chr3L_4_13070001 chr3L_13070001 RAL-406 1599 chr3L 11579535 11579580 chr3L 11579661 11579705 11 123 5.5 6.0 5.8 1.6 170 chr3L 11579535 intergenic CG43390 - chr3L 11579620 intergenic CG43390 - chr3L 11579705 intergenic CG43390 - chr3L_11_11575001 chr3L_11575001 RAL-406 1600 chr3L 11587902 11587945 chr3L 11587998 11588041 7 93 3.5 7.5 5.5 1.1 139 chr3L 11587902 intergenic rt - chr3L 11587972 intergenic rt - chr3L 11588041 intergenic rt - chr3L_7_11585001 chr3L_11585001 RAL-406 1601 chr3L 11588712 11588756 chr3L 11588888 11588916 13 170 4.0 4.5 4.2 2.5 204 chr3L 11588712 intergenic not near genes chr3L 11588814 intergenic not near genes chr3L 11588916 intergenic not near genes chr3L_13_11585001 chr3L_11585001 RAL-406 1602 chr3L 11590253 11590273 chr3L 11590363 11590383 9 110 2.0 4.5 3.2 2.1 130 chr3L 11590253 intergenic CG7377 + chr3L 11590318 intergenic CG7377 + chr3L 11590383 intergenic CG7377 +,CG33268 - chr3L_9_11590001 chr3L_11590001 RAL-406 1603 chr3L 11678074 11678125 chr3L 11678181 11678232 27 106 6.5 7.5 7.0 3.4 158 chr3L 11678074 intron CG32085 - chr3L 11678153 intron CG32085 - chr3L 11678232 intron CG32085 - chr3L_27_11675001 chr3L_11675001 RAL-406 1604 chr3L 11706295 11706340 chr3L 11706779 11706794 18 478 6.5 4.0 5.2 2.9 499 chr3L 11706295 intron CG11658 - chr3L 11706544 intron CG11658 - chr3L 11706794 intron CG11658 - chr3L_18_11705001 chr3L_11705001 RAL-406 1605 chr3L 11723069 11723110 chr3L 11727882 11727925 Doc 15 4811 11.0 11.0 11.0 1.2 4856 chr3L 11723069 3` UTR Bmcp + chr3L 11725497 intron Bmcp + chr3L 11727925 3` UTR Bmcp + chr3L_15_11725001 chr3L_11725001 RAL-406 1606 chr3L 11743999 11744035 chr3L 11744127 11744138 16 120 3.0 6.0 4.5 2.9 139 chr3L 11743999 exon CG6024 - chr3L 11744068 intron CG6024 - chr3L 11744138 intron CG6024 - chr3L_16_11740001 chr3L_11740001 RAL-406 1607 chr3L 11754522 11754531 chr3L 11754619 11754629 4 98 1.5 10.0 5.8 0.6 107 chr3L 11754522 intron CG6024 - chr3L 11754576 intron CG6024 - chr3L 11754629 intron CG6024 - chr3L_4_11750001 chr3L_11750001 RAL-406 1608 chr3L 11754532 11754551 chr3L 11754604 11754649 8 90 1.0 8.0 4.5 1.5 117 chr3L 11754532 intron CG6024 - chr3L 11754590 intron CG6024 - chr3L 11754649 intron CG6024 - chr3L_8_11750001 chr3L_11750001 RAL-406 1609 chr3L 11771428 11771472 chr3L 11771525 11771531 6 86 8.0 0.5 4.2 1.2 103 chr3L 11771428 exon Muc68D - chr3L 11771480 exon Muc68D - chr3L 11771531 exon Muc68D - chr3L_6_11770001 chr3L_11770001 RAL-406 1610 chr3L 11816779 11816815 chr3L 11816899 11816936 11 121 6.0 9.0 7.5 1.3 157 chr3L 11816779 3` UTR CG5946 - chr3L 11816858 3` UTR CG5946 - chr3L 11816936 3` UTR CG5946 - chr3L_11_11815001 chr3L_11815001 RAL-406 1611 chr3L 11864541 11864554 chr3L 11865856 11865869 pogo 5 1315 4.0 5.0 4.5 0.9 1328 chr3L 11864541 intron CG44837 - chr3L 11865205 intron CG44837 - chr3L 11865869 intron CG44837 - chr3L_5_11865001 chr3L_11865001 RAL-406 1612 chr3L 11864568 11864582 chr3L 11865847 11865897 pogo 10 1306 1.0 4.5 2.8 2.6 1329 chr3L 11864568 intron CG44837 - chr3L 11865232 intron CG44837 - chr3L 11865897 intron CG44837 - chr3L_10_11865001 chr3L_11865001 RAL-406 1613 chr3L 11887238 11887254 chr3L 11887355 11887371 6 115 16.5 0.0 8.2 0.7 133 chr3L 11887238 intron CG44837 - chr3L 11887304 intron,3` UTR CG44837 -,CG5897 - chr3L 11887371 intron,3` UTR CG44837 -,CG5897 - chr3L_6_11885001 chr3L_11885001 RAL-406 1614 chr3L 11943496 11943519 chr3L 11943617 11943620 7 118 6.5 9.0 7.8 0.8 124 chr3L 11943496 intergenic Rpt4R +,CG5883 - chr3L 11943558 intergenic Rpt4R +,CG5883 - chr3L 11943620 intergenic CG5883 -,Rpt4R + chr3L_7_11940001 chr3L_11940001 RAL-406 1615 chr3L 11945161 11945203 chr3L 11945262 11945273 13 98 5.0 5.5 5.2 2.1 112 chr3L 11945161 intergenic CG5883 - chr3L 11945217 intergenic CG5883 - chr3L 11945273 intergenic CG5883 - chr3L_13_11945001 chr3L_11945001 RAL-406 1616 chr3L 12013893 12013937 chr3L 12014004 12014048 15 109 4.0 1.5 2.8 3.9 155 chr3L 12013893 intron rols - chr3L 12013970 intron rols - chr3L 12014048 intron rols - chr3L_15_12010001 chr3L_12010001 RAL-406 1617 chr3L 12039611 12039659 chr3L 12039721 12039769 21 108 6.5 1.0 3.8 4.4 158 chr3L 12039611 intron rols - chr3L 12039690 intron rols - chr3L 12039769 intron rols - chr3L_21_12035001 chr3L_12035001 RAL-406 1618 chr3L 12052685 12052737 chr3L 12052794 12052846 28 106 5.0 4.5 4.8 4.8 161 chr3L 12052685 intron rols - chr3L 12052766 intron rols - chr3L 12052846 intron rols - chr3L_28_12050001 chr3L_12050001 RAL-406 1619 chr3L 12080080 12080128 chr3L 12080183 12080231 4 103 3.0 2.5 2.8 1.1 151 chr3L 12080080 intron Sema-5c - chr3L 12080156 intron Sema-5c - chr3L 12080231 intron Sema-5c - chr3L_4_12080001 chr3L_12080001 RAL-406 1620 chr3L 12170772 12170822 chr3L 12170874 12170924 18 98 3.0 7.5 5.2 2.9 152 chr3L 12170772 intron Rh7 - chr3L 12170848 intron Rh7 - chr3L 12170924 intron Rh7 - chr3L_18_12170001 chr3L_12170001 RAL-406 1621 chr3L 12204364 12204419 chr3L 12204475 12204530 24 109 8.0 7.0 7.5 2.8 166 chr3L 12204364 3` UTR CG5626 - chr3L 12204447 intron CG5626 - chr3L 12204530 intron CG5626 - chr3L_24_12200001 chr3L_12200001 RAL-406 1622 chr3L 12317399 12317451 chr3L 12317520 12317536 11 109 8.0 1.0 4.5 2.0 137 chr3L 12317399 intergenic not near genes chr3L 12317468 intergenic not near genes chr3L 12317536 intergenic not near genes chr3L_11_12315001 chr3L_12315001 RAL-406 1623 chr3L 12327126 12327131 chr3L 12327258 12327264 4 133 6.0 3.0 4.5 0.7 138 chr3L 12327126 intergenic not near genes chr3L 12327195 intergenic not near genes chr3L 12327264 intergenic not near genes chr3L_4_12325001 chr3L_12325001 RAL-406 1624 chr3L 12381504 12381546 chr3L 12381602 12381644 18 97 10.5 4.0 7.2 2.2 140 chr3L 12381504 intron Ncc69 - chr3L 12381574 intron Ncc69 - chr3L 12381644 intron Ncc69 - chr3L_18_12380001 chr3L_12380001 RAL-406 1625 chr3L 12449042 12449094 chr3L 12449143 12449195 10 99 0.0 3.0 1.5 4.0 153 chr3L 12449042 intergenic not near genes chr3L 12449118 intergenic not near genes chr3L 12449195 intergenic not near genes chr3L_10_12445001 chr3L_12445001 RAL-406 1626 chr3L 12458483 12458510 chr3L 12458594 12458629 5 113 2.0 11.0 6.5 0.7 146 chr3L 12458483 intergenic not near genes chr3L 12458556 intergenic not near genes chr3L 12458629 intergenic not near genes chr3L_5_12455001 chr3L_12455001 RAL-406 1627 chr3L 12474726 12474775 chr3L 12474825 12474874 33 98 6.0 8.0 7.0 4.1 148 chr3L 12474726 3` UTR CG10663 - chr3L 12474800 3` UTR CG10663 - chr3L 12474874 3` UTR CG10663 - chr3L_33_12470001 chr3L_12470001 RAL-406 1628 chr3L 12491708 12491734 chr3L 12491790 12491837 5 94 0.0 1.5 0.8 2.8 129 chr3L 12491708 intergenic CG10657 -,CR45682 + chr3L 12491772 intergenic CG10657 -,CR45682 + chr3L 12491837 3` UTR CG10657 - chr3L_5_12490001 chr3L_12490001 RAL-406 1629 chr3L 12578051 12578078 chr3L 12578145 12578186 8 104 1.5 0.0 0.8 4.4 135 chr3L 12578051 intergenic not near genes chr3L 12578118 intergenic not near genes chr3L 12578186 intergenic not near genes chr3L_8_12575001 chr3L_12575001 RAL-406 1630 chr3L 12579125 12579138 chr3L 12579259 12579272 8 133 8.5 0.0 4.2 1.5 147 chr3L 12579125 intergenic not near genes chr3L 12579198 intergenic not near genes chr3L 12579272 intergenic not near genes chr3L_8_12575001 chr3L_12575001 RAL-406 1631 chr3L 12605709 12605712 chr3L 12605808 12605811 4 99 11.5 5.5 8.5 0.4 102 chr3L 12605709 intergenic not near genes chr3L 12605760 intergenic not near genes chr3L 12605811 intergenic not near genes chr3L_4_12605001 chr3L_12605001 RAL-406 1632 chr3L 12605713 12605747 chr3L 12605806 12605847 8 99 5.0 5.5 5.2 1.3 134 chr3L 12605713 intergenic not near genes chr3L 12605780 intergenic not near genes chr3L 12605847 intergenic not near genes chr3L_8_12605001 chr3L_12605001 RAL-406 1633 chr3L 12614579 12614593 chr3L 12614737 12614751 9 158 0.0 7.0 3.5 2.0 172 chr3L 12614579 intron caup + chr3L 12614665 intron caup + chr3L 12614751 intron caup + chr3L_9_12610001 chr3L_12610001 RAL-406 1634 chr3L 12626132 12626166 chr3L 12626261 12626295 19 129 5.5 6.0 5.8 2.8 163 chr3L 12626132 intergenic not near genes chr3L 12626214 intergenic not near genes chr3L 12626295 intergenic not near genes chr3L_19_12625001 chr3L_12625001 RAL-406 1635 chr3L 12656778 12656803 chr3L 12656878 12656888 12 114 2.5 1.5 2.0 4.0 110 chr3L 12656778 intergenic not near genes chr3L 12656833 intergenic not near genes chr3L 12656888 intergenic not near genes chr3L_12_12655001 chr3L_12655001 RAL-406 1636 chr3L 12720306 12720356 chr3L 12720411 12720461 24 101 5.5 8.0 6.8 3.1 155 chr3L 12720306 intergenic not near genes chr3L 12720384 intergenic not near genes chr3L 12720461 intergenic not near genes chr3L_24_12720001 chr3L_12720001 RAL-406 1637 chr3L 12728017 12728043 chr3L 12728121 12728142 10 104 5.5 7.5 6.5 1.3 125 chr3L 12728017 intergenic not near genes chr3L 12728080 intergenic not near genes chr3L 12728142 intergenic not near genes chr3L_10_12725001 chr3L_12725001 RAL-406 1638 chr3L 12857977 12858004 chr3L 12858092 12858119 11 115 10.5 3.5 7.0 1.4 142 chr3L 12857977 3` UTR CG32107 - chr3L 12858048 3` UTR CG32107 - chr3L 12858119 3` UTR CG32107 - chr3L_11_12855001 chr3L_12855001 RAL-406 1639 chr3L 12874920 12874947 chr3L 12877227 12877259 jockey 8 2311 5.0 13.0 9.0 0.8 2339 chr3L 12874920 intergenic not near genes chr3L 12876090 intergenic not near genes chr3L 12877259 intergenic not near genes chr3L_8_12875001 chr3L_12875001 RAL-406 1640 chr3L 12894789 12894810 chr3L 12894881 12894908 9 97 13.5 9.0 11.2 0.7 119 chr3L 12894789 intergenic CG14118 + chr3L 12894848 intergenic CG14118 + chr3L 12894908 intergenic CG14118 + chr3L_9_12890001 chr3L_12890001 RAL-406 1641 chr3L 12943843 12943861 chr3L 12943967 12943985 14 124 6.0 0.5 3.2 3.3 142 chr3L 12943843 intergenic not near genes chr3L 12943914 intergenic not near genes chr3L 12943985 intergenic not near genes chr3L_14_12940001 chr3L_12940001 RAL-406 1642 chr3L 12957779 12957816 chr3L 12962266 12962318 copia 13 4498 6.0 5.0 5.5 2.0 4539 chr3L 12957779 intergenic not near genes chr3L 12960048 intergenic not near genes chr3L 12962318 intergenic not near genes chr3L_13_12960001 chr3L_12960001 RAL-406 1643 chr3L 12967820 12967844 chr3L 12967929 12967953 13 108 10.0 8.0 9.0 1.3 133 chr3L 12967820 intergenic Or69a - chr3L 12967886 intergenic Or69a - chr3L 12967953 intergenic Or69a - chr3L_13_12965001 chr3L_12965001 RAL-406 1644 chr3L 12967845 12967861 chr3L 12967924 12967970 7 99 5.5 7.0 6.2 1.0 125 chr3L 12967845 intergenic Or69a - chr3L 12967908 intergenic Or69a - chr3L 12967970 intergenic Or69a - chr3L_7_12965001 chr3L_12965001 RAL-406 1645 chr3L 12978500 12978548 chr3L 12978602 12978652 11 98 3.5 5.5 4.5 2.0 152 chr3L 12978500 intergenic not near genes chr3L 12978576 intergenic not near genes chr3L 12978652 intergenic not near genes chr3L_11_12975001 chr3L_12975001 RAL-406 1646 chr3L 12988313 12988340 chr3L 12988520 12988561 7 215 9.5 38.0 23.8 0.3 248 chr3L 12988313 intergenic not near genes chr3L 12988437 intergenic not near genes chr3L 12988561 intergenic not near genes chr3L_7_12985001 chr3L_12985001 RAL-406 1647 chr3L 12988453 12988476 chr3L 12988932 12988955 14 483 29.0 53.5 41.2 0.3 502 chr3L 12988453 intergenic not near genes chr3L 12988704 intergenic not near genes chr3L 12988955 intergenic not near genes chr3L_14_12985001 chr3L_12985001 RAL-406 1648 chr3L 12988447 12988463 chr3L 12988956 12988982 23 489 22.0 48.5 35.2 0.6 535 chr3L 12988447 intergenic not near genes chr3L 12988714 intergenic not near genes chr3L 12988982 intergenic not near genes chr3L_23_12985001 chr3L_12985001 RAL-406 1649 chr3L 13007675 13007719 chr3L 13007774 13007818 14 94 1.5 6.0 3.8 2.9 143 chr3L 13007675 exon CG11263 + chr3L 13007746 3` UTR CG11263 + chr3L 13007818 3` UTR CG11263 + chr3L_14_13005001 chr3L_13005001 RAL-406 1650 chr3L 13017916 13017917 chr3L 13018003 13018033 4 104 0.0 7.0 3.5 0.9 117 chr3L 13017916 intergenic mRpL20 -,ste14 +,CR45445 - chr3L 13017974 intergenic mRpL20 -,ste14 +,CR45445 - chr3L 13018033 intergenic mRpL20 -,ste14 +,CR45445 - chr3L_4_13015001 chr3L_13015001 RAL-406 1651 chr3L 13095797 13095836 chr3L 13095905 13095938 11 104 6.5 0.5 3.5 2.4 141 chr3L 13095797 intergenic not near genes chr3L 13095868 intergenic not near genes chr3L 13095938 intergenic not near genes chr3L_11_13095001 chr3L_13095001 RAL-406 1652 chr3L 13119667 13119696 chr3L 13119766 13119782 6 93 8.0 9.5 8.8 0.6 115 chr3L 13119667 intergenic not near genes chr3L 13119724 intergenic not near genes chr3L 13119782 intergenic not near genes chr3L_6_13115001 chr3L_13115001 RAL-406 1653 chr3L 13144097 13144149 chr3L 13144194 13144246 16 94 8.0 6.0 7.0 2.0 149 chr3L 13144097 intergenic not near genes chr3L 13144172 intergenic not near genes chr3L 13144246 intergenic not near genes chr3L_16_13140001 chr3L_13140001 RAL-406 1654 chr3L 13208341 13208366 chr3L 13208440 13208465 6 96 2.5 0.0 1.2 2.7 124 chr3L 13208341 intergenic CR45096 - chr3L 13208403 intergenic CR45096 - chr3L 13208465 intergenic CR45096 - chr3L_6_13205001 chr3L_13205001 RAL-406 1655 chr3L 13229401 13229441 chr3L 13229517 13229555 10 115 3.0 3.0 3.0 2.5 154 chr3L 13229401 intron caps + chr3L 13229478 intron caps + chr3L 13229555 intron caps + chr3L_10_13225001 chr3L_13225001 RAL-406 1656 chr3L 13241163 13241192 chr3L 13241270 13241299 9 101 9.0 5.5 7.2 1.1 136 chr3L 13241163 intron caps + chr3L 13241231 intron caps + chr3L 13241299 intron caps + chr3L_9_13240001 chr3L_13240001 RAL-406 1657 chr3L 13267277 13267284 chr3L 13267405 13267417 5 131 8.0 0.5 4.2 1.0 140 chr3L 13267277 intron caps + chr3L 13267347 intron caps + chr3L 13267417 intron caps + chr3L_5_13265001 chr3L_13265001 RAL-406 1658 chr3L 13267294 13267317 chr3L 13267402 13267450 8 128 2.5 0.5 1.5 3.2 156 chr3L 13267294 intron caps + chr3L 13267372 intron caps + chr3L 13267450 intron caps + chr3L_8_13265001 chr3L_13265001 RAL-406 1659 chr3L 13296499 13296538 chr3L 13296610 13296649 8 110 7.5 5.0 6.2 1.1 150 chr3L 13296499 intergenic Sfp70A4 - chr3L 13296574 3` UTR Sfp70A4 - chr3L 13296649 3` UTR Sfp70A4 - chr3L_8_13295001 chr3L_13295001 RAL-406 1660 chr3L 13315945 13315951 chr3L 13316214 13316235 4 280 0.0 7.0 3.5 0.9 290 chr3L 13315945 intergenic not near genes chr3L 13316090 intergenic not near genes chr3L 13316235 intergenic not near genes chr3L_4_13315001 chr3L_13315001 RAL-406 1661 chr3L 13330771 13330778 chr3L 13331004 13331011 4 233 3.0 6.5 4.8 0.7 240 chr3L 13330771 intergenic not near genes chr3L 13330891 intergenic not near genes chr3L 13331011 intergenic not near genes chr3L_4_13330001 chr3L_13330001 RAL-406 1662 chr3L 13365025 13365047 chr3L 13365123 13365145 11 98 14.0 0.0 7.0 1.4 120 chr3L 13365025 intergenic not near genes chr3L 13365085 intergenic not near genes chr3L 13365145 intergenic not near genes chr3L_11_13365001 chr3L_13365001 RAL-406 1663 chr3L 13392750 13392761 chr3L 13392848 13392864 4 99 7.0 0.0 3.5 0.9 114 chr3L 13392750 intergenic not near genes chr3L 13392807 intergenic not near genes chr3L 13392864 intergenic not near genes chr3L_4_13390001 chr3L_13390001 RAL-406 1664 chr3L 13424810 13424835 chr3L 13424883 13424914 7 86 5.0 6.5 5.8 1.0 104 chr3L 13424810 exon CG14106 - chr3L 13424862 exon CG14106 - chr3L 13424914 exon CG14106 - chr3L_7_13420001 chr3L_13420001 RAL-406 1665 chr3L 13451755 13451785 chr3L 13452100 13452130 11 342 4.5 2.0 3.2 2.6 375 chr3L 13451755 intron CG10738 + chr3L 13451942 intron CG10738 + chr3L 13452130 intron CG10738 + chr3L_11_13450001 chr3L_13450001 RAL-406 1666 chr3L 13452647 13452668 chr3L 13452755 13452775 9 106 0.5 2.5 1.5 3.6 128 chr3L 13452647 intron CG10738 + chr3L 13452711 intron CG10738 + chr3L 13452775 intron CG10738 + chr3L_9_13450001 chr3L_13450001 RAL-406 1667 chr3L 13452670 13452682 chr3L 13452754 13452790 5 103 0.5 2.0 1.2 2.3 120 chr3L 13452670 intron CG10738 + chr3L 13452730 intron CG10738 + chr3L 13452790 intron CG10738 + chr3L_5_13450001 chr3L_13450001 RAL-406 1668 chr3L 13455732 13455735 chr3L 13455907 13455910 4 175 16.5 6.5 11.5 0.3 178 chr3L 13455732 intron CG10738 + chr3L 13455821 intron CG10738 + chr3L 13455910 intron CG10738 + chr3L_4_13455001 chr3L_13455001 RAL-406 1669 chr3L 13455736 13455782 chr3L 13455905 13455957 17 172 6.0 6.5 6.2 2.4 221 chr3L 13455736 intron CG10738 + chr3L 13455846 intron CG10738 + chr3L 13455957 intron CG10738 + chr3L_17_13455001 chr3L_13455001 RAL-406 1670 chr3L 13525141 13525185 chr3L 13532957 13532983 roo 12 7810 14.0 9.5 11.8 0.9 7842 chr3L 13525141 intergenic not near genes chr3L 13529062 intergenic not near genes chr3L 13532983 intergenic not near genes chr3L_12_13525001 chr3L_13525001 RAL-406 1671 chr3L 13574611 13574619 chr3L 13580132 13580150 Rt1c 4 5526 2.5 1.0 1.8 1.4 5539 chr3L 13574611 intron bru-3 - chr3L 13577380 intron bru-3 - chr3L 13580150 intron bru-3 - chr3L_4_13575001 chr3L_13575001 RAL-406 1672 chr3L 13677511 13677558 chr3L 13677608 13677655 14 96 4.0 5.5 4.8 2.4 144 chr3L 13677511 intron bru-3 - chr3L 13677583 intron bru-3 - chr3L 13677655 intron bru-3 - chr3L_14_13675001 chr3L_13675001 RAL-406 1673 chr3L 13766886 13766919 chr3L 13767004 13767037 10 117 7.5 4.5 6.0 1.4 151 chr3L 13766886 intron bru-3 - chr3L 13766962 intron bru-3 - chr3L 13767037 intron bru-3 - chr3L_10_13765001 chr3L_13765001 RAL-406 1674 chr3L 13769011 13769021 chr3L 13769120 13769130 4 109 0.0 5.0 2.5 1.1 119 chr3L 13769011 intron bru-3 - chr3L 13769070 intron bru-3 - chr3L 13769130 intron bru-3 - chr3L_4_13765001 chr3L_13765001 RAL-406 1675 chr3L 13804527 13804537 chr3L 13822833 13822843 roo 5 18305 4.5 3.0 3.8 1.0 18316 chr3L 13804527 intergenic not near genes chr3L 13813685 intergenic not near genes chr3L 13822843 intergenic not near genes chr3L_5_13810001 chr3L_13810001 RAL-406 1676 chr3L 13804538 13804578 chr3L 13822829 13822862 roo 10 18292 2.0 3.0 2.5 2.9 18324 chr3L 13804538 intergenic not near genes chr3L 13813700 intergenic not near genes chr3L 13822862 intergenic not near genes chr3L_10_13810001 chr3L_13810001 RAL-406 1677 chr3L 13868140 13868169 chr3L 13868241 13868270 11 101 10.5 4.5 7.5 1.3 130 chr3L 13868140 3` UTR dysc - chr3L 13868205 3` UTR dysc - chr3L 13868270 3` UTR dysc - chr3L_11_13865001 chr3L_13865001 RAL-406 1678 chr3L 13884360 13884386 chr3L 13884470 13884497 16 108 10.0 6.0 8.0 1.8 137 chr3L 13884360 intron dysc - chr3L 13884428 intron dysc - chr3L 13884497 intron dysc - chr3L_16_13880001 chr3L_13880001 RAL-406 1679 chr3L 13901549 13901599 chr3L 13901646 13901696 12 95 3.0 0.5 1.8 4.3 147 chr3L 13901549 intron dysc - chr3L 13901622 intron dysc - chr3L 13901696 5` UTR dysc - chr3L_12_13900001 chr3L_13900001 RAL-406 1680 chr3L 13920400 13920432 chr3L 13920500 13920532 14 99 5.0 5.0 5.0 2.3 132 chr3L 13920400 intron Rgl - chr3L 13920466 intron Rgl - chr3L 13920532 intron Rgl - chr3L_14_13920001 chr3L_13920001 RAL-406 1681 chr3L 13936475 13936650 chr3L 13936574 13936804 9 136 2.5 3.0 2.8 2.4 329 chr3L 13936475 intergenic not near genes chr3L 13936640 intergenic not near genes chr3L 13936804 intergenic not near genes chr3L_9_13935001 chr3L_13935001 RAL-406 1682 chr3L 14099422 14099451 chr3L 14099522 14099538 8 102 1.0 11.0 6.0 1.1 116 chr3L 14099422 intergenic not near genes chr3L 14099480 intergenic not near genes chr3L 14099538 intergenic not near genes chr3L_8_14095001 chr3L_14095001 RAL-406 1683 chr3L 14141390 14141411 chr3L 14141497 14141518 4 107 4.0 0.0 2.0 1.3 128 chr3L 14141390 intergenic not near genes chr3L 14141454 intergenic not near genes chr3L 14141518 intergenic not near genes chr3L_4_14140001 chr3L_14140001 RAL-406 1684 chr3L 14194708 14194737 chr3L 14194804 14194833 16 95 10.0 9.5 9.8 1.5 125 chr3L 14194708 intron nuf + chr3L 14194770 intron nuf + chr3L 14194833 intron nuf + chr3L_16_14190001 chr3L_14190001 RAL-406 1685 chr3L 14194738 14194742 chr3L 14194800 14194832 4 86 7.5 7.0 7.2 0.5 94 chr3L 14194738 intron nuf + chr3L 14194785 intron nuf + chr3L 14194832 intron nuf + chr3L_4_14190001 chr3L_14190001 RAL-406 1686 chr3L 14211423 14211466 chr3L 14211521 14211541 24 92 5.5 5.5 5.5 3.7 118 chr3L 14211423 intron nuf + chr3L 14211482 intron nuf + chr3L 14211541 intron nuf + chr3L_24_14210001 chr3L_14210001 RAL-406 1687 chr3L 14228136 14228155 chr3L 14228241 14228260 5 104 4.0 0.0 2.0 1.7 124 chr3L 14228136 intron nuf + chr3L 14228198 intron nuf + chr3L 14228260 intron nuf + chr3L_5_14225001 chr3L_14225001 RAL-406 1688 chr3L 14245577 14245591 chr3L 14245679 14245705 1360 6 108 4.0 5.0 4.5 1.1 128 chr3L 14245577 3` UTR CR44561 - chr3L 14245641 3` UTR CR44561 - chr3L 14245705 intergenic CR44561 -,CR44560 + chr3L_6_14245001 chr3L_14245001 RAL-406 1689 chr3L 14267394 14267403 chr3L 14271826 14271835 F-element 6 4432 4.5 0.5 2.5 1.7 4441 chr3L 14267394 intergenic not near genes chr3L 14269614 intergenic not near genes chr3L 14271835 intergenic not near genes chr3L_6_14265001 chr3L_14265001 RAL-406 1690 chr3L 14295989 14296014 chr3L 14296466 14296520 roo 13 492 2.5 4.0 3.2 3.1 531 chr3L 14295989 intron fz + chr3L 14296254 intron fz + chr3L 14296520 intron fz + chr3L_13_14295001 chr3L_14295001 RAL-406 1691 chr3L 14312039 14312055 chr3L 14316839 14316862 X-element 4 4813 1.0 1.0 1.0 2.0 4823 chr3L 14312039 exon fz + chr3L 14314450 intron fz + chr3L 14316862 intron fz + chr3L_4_14310001 chr3L_14310001 RAL-406 1692 chr3L 14341404 14341433 chr3L 14341548 14341588 10 152 0.5 1.0 0.8 5.6 184 chr3L 14341404 intron fz + chr3L 14341496 intron fz + chr3L 14341588 intron fz + chr3L_10_14340001 chr3L_14340001 RAL-406 1693 chr3L 14356503 14356553 chr3L 14356603 14356653 12 93 2.0 5.0 3.5 2.7 150 chr3L 14356503 intron fz + chr3L 14356578 intron fz + chr3L 14356653 intron fz + chr3L_12_14355001 chr3L_14355001 RAL-406 1694 chr3L 14370029 14370051 chr3L 14370100 14370125 7 74 2.5 2.5 2.5 2.0 96 chr3L 14370029 intergenic CG13481 - chr3L 14370077 intergenic CG13481 - chr3L 14370125 intergenic CG13481 - chr3L_7_14370001 chr3L_14370001 RAL-406 1695 chr3L 14441569 14441625 chr3L 14441738 14441746 16 156 4.5 4.5 4.5 2.9 177 chr3L 14441569 intron bbg - chr3L 14441658 intron bbg - chr3L 14441746 intron bbg - chr3L_16_14440001 chr3L_14440001 RAL-406 1696 chr3L 14444709 14444741 chr3L 14444899 14444920 8 187 4.0 9.0 6.5 1.1 211 chr3L 14444709 intron bbg - chr3L 14444814 intron bbg - chr3L 14444920 intron bbg - chr3L_8_14440001 chr3L_14440001 RAL-406 1697 chr3L 14455344 14455390 chr3L 14455445 14455489 10 97 4.5 0.0 2.2 3.1 145 chr3L 14455344 intron bbg - chr3L 14455416 intron bbg - chr3L 14455489 intron bbg - chr3L_10_14455001 chr3L_14455001 RAL-406 1698 chr3L 14468435 14468451 chr3L 14473661 14473677 copia 10 5226 12.5 5.0 8.8 1.0 5242 chr3L 14468435 intron bbg - chr3L 14471056 intron bbg - chr3L 14473677 intron bbg - chr3L_10_14470001 chr3L_14470001 RAL-406 1699 chr3L 14468453 14468477 chr3L 14473656 14473703 copia 11 5223 6.0 5.0 5.5 1.7 5250 chr3L 14468453 intron bbg - chr3L 14471078 intron bbg - chr3L 14473703 intron bbg - chr3L_11_14470001 chr3L_14470001 RAL-406 1700 chr3L 14485999 14486043 chr3L 14486100 14486103 12 94 7.0 2.0 4.5 2.2 104 chr3L 14485999 intron bbg - chr3L 14486051 intron bbg - chr3L 14486103 intron bbg - chr3L_12_14485001 chr3L_14485001 RAL-406 1701 chr3L 14522081 14522128 chr3L 14522199 14522221 11 116 3.5 2.0 2.8 2.9 140 chr3L 14522081 intron bbg - chr3L 14522151 intron bbg - chr3L 14522221 intron bbg - chr3L_11_14520001 chr3L_14520001 RAL-406 1702 chr3L 14565723 14565774 chr3L 14565834 14565869 26 109 1.0 1.5 1.2 11.8 146 chr3L 14565723 intergenic not near genes chr3L 14565796 intergenic not near genes chr3L 14565869 intergenic not near genes chr3L_26_14565001 chr3L_14565001 RAL-406 1703 chr3L 14584144 14584189 chr3L 14584251 14584296 30 103 4.5 6.5 5.5 4.6 152 chr3L 14584144 intron HGTX - chr3L 14584220 intron HGTX - chr3L 14584296 intron HGTX - chr3L_30_14580001 chr3L_14580001 RAL-406 1704 chr3L 14605631 14605676 chr3L 14605745 14605791 4 114 0.0 5.5 2.8 1.1 160 chr3L 14605631 intergenic not near genes chr3L 14605711 intergenic not near genes chr3L 14605791 intergenic not near genes chr3L_4_14605001 chr3L_14605001 RAL-406 1705 chr3L 14633765 14633816 chr3L 14633881 14633932 31 113 4.0 2.0 3.0 7.8 167 chr3L 14633765 intron dlp + chr3L 14633848 intron dlp + chr3L 14633932 intron dlp + chr3L_31_14630001 chr3L_14630001 RAL-406 1706 chr3L 14652617 14652670 chr3L 14652716 14652769 19 97 5.0 8.0 6.5 2.5 152 chr3L 14652617 intron dlp + chr3L 14652693 intron dlp + chr3L 14652769 intron dlp + chr3L_19_14650001 chr3L_14650001 RAL-406 1707 chr3L 14731303 14731345 chr3L 14731741 14731781 10 437 7.5 3.0 5.2 1.6 478 chr3L 14731303 intron ome + chr3L 14731542 intron ome + chr3L 14731781 intron ome + chr3L_10_14730001 chr3L_14730001 RAL-406 1708 chr3L 14818405 14818451 chr3L 14818655 14818701 18 249 4.5 5.5 5.0 3.0 296 chr3L 14818405 intron CG17839 + chr3L 14818553 intron CG17839 + chr3L 14818701 intron CG17839 + chr3L_18_14815001 chr3L_14815001 RAL-406 1709 chr3L 14825147 14825157 chr3L 14832894 14832899 Stalker2 5 7746 2.0 9.0 5.5 0.8 7752 chr3L 14825147 intron CG17839 + chr3L 14829023 intron CG17839 + chr3L 14832899 intron CG17839 + chr3L_5_14825001 chr3L_14825001 RAL-406 1710 chr3L 14840338 14840385 chr3L 14840463 14840510 7 125 2.0 1.5 1.8 2.5 172 chr3L 14840338 intron CG17839 + chr3L 14840424 intron CG17839 + chr3L 14840510 intron CG17839 + chr3L_7_14840001 chr3L_14840001 RAL-406 1711 chr3L 14861785 14861834 chr3L 14861885 14861901 11 95 3.5 4.5 4.0 2.2 116 chr3L 14861785 intron CG17839 + chr3L 14861843 intron CG17839 + chr3L 14861901 intron CG17839 + chr3L_11_14860001 chr3L_14860001 RAL-406 1712 chr3L 14959974 14960005 chr3L 14960078 14960109 6 104 6.0 4.5 5.2 1.0 135 chr3L 14959974 intergenic not near genes chr3L 14960042 intergenic not near genes chr3L 14960109 intergenic not near genes chr3L_6_14960001 chr3L_14960001 RAL-406 1713 chr3L 14960007 14960016 chr3L 14960077 14960120 7 96 3.5 4.0 3.8 1.5 113 chr3L 14960007 intergenic not near genes chr3L 14960064 intergenic not near genes chr3L 14960120 intergenic not near genes chr3L_7_14960001 chr3L_14960001 RAL-406 1714 chr3L 14970742 14970760 chr3L 14971072 14971090 F-element 7 330 11.5 6.5 9.0 0.7 348 chr3L 14970742 intergenic Tom + chr3L 14970916 intergenic not near genes chr3L 14971090 intergenic not near genes chr3L_7_14970001 chr3L_14970001 RAL-406 1715 chr3L 15085030 15085064 chr3L 15086216 15086249 1360 9 1186 14.5 6.5 10.5 0.8 1219 chr3L 15085030 intron cp309 - chr3L 15085640 intron cp309 - chr3L 15086249 intron cp309 - chr3L_9_15085001 chr3L_15085001 RAL-406 1716 chr3L 15085068 15085084 chr3L 15086213 15086228 1360 4 1163 8.0 6.0 7.0 0.5 1160 chr3L 15085068 intron cp309 - chr3L 15085648 intron cp309 - chr3L 15086228 intron cp309 - chr3L_4_15085001 chr3L_15085001 RAL-406 1717 chr3L 15164847 15164863 chr3L 15164946 15164967 7 100 5.0 8.5 6.8 0.9 120 chr3L 15164847 intergenic not near genes chr3L 15164907 intergenic not near genes chr3L 15164967 intergenic not near genes chr3L_7_15160001 chr3L_15160001 RAL-406 1718 chr3L 15164871 15165036 chr3L 15164943 15165155 9 108 6.0 7.0 6.5 1.2 284 chr3L 15164871 intergenic not near genes chr3L 15165013 intergenic not near genes chr3L 15165155 intergenic not near genes chr3L_9_15165001 chr3L_15165001 RAL-406 1719 chr3L 15209051 15209100 chr3L 15209157 15209205 12 105 1.5 7.0 4.2 2.3 154 chr3L 15209051 intergenic CG6888 + chr3L 15209128 intergenic not near genes chr3L 15209205 intergenic not near genes chr3L_12_15205001 chr3L_15205001 RAL-406 1720 chr3L 15257417 15257433 chr3L 15257649 15257666 5 233 8.0 3.0 5.5 0.8 249 chr3L 15257417 intergenic not near genes chr3L 15257542 intergenic not near genes chr3L 15257666 intergenic not near genes chr3L_5_15255001 chr3L_15255001 RAL-406 1721 chr3L 15264043 15264052 chr3L 15264140 15264149 5 97 0.0 5.0 2.5 1.4 106 chr3L 15264043 intergenic not near genes chr3L 15264096 intergenic not near genes chr3L 15264149 intergenic not near genes chr3L_5_15260001 chr3L_15260001 RAL-406 1722 chr3L 15295754 15295800 chr3L 15298617 15298645 gypsy5 19 2860 4.5 7.5 6.0 2.7 2891 chr3L 15295754 intergenic not near genes chr3L 15297200 intergenic not near genes chr3L 15298645 intergenic Best4 + chr3L_19_15295001 chr3L_15295001 RAL-406 1723 chr3L 15321982 15322011 chr3L 15322120 15322149 6 138 7.0 3.5 5.2 1.0 167 chr3L 15321982 intergenic not near genes chr3L 15322066 intergenic not near genes chr3L 15322149 intergenic not near genes chr3L_6_15320001 chr3L_15320001 RAL-406 1724 chr3L 15366904 15366928 chr3L 15367059 15367084 8 154 7.0 2.5 4.8 1.4 180 chr3L 15366904 intergenic not near genes chr3L 15366994 intergenic not near genes chr3L 15367084 intergenic not near genes chr3L_8_15365001 chr3L_15365001 RAL-406 1725 chr3L 15406004 15406050 chr3L 15406106 15406153 9 101 3.5 6.5 5.0 1.5 149 chr3L 15406004 intergenic not near genes chr3L 15406078 intergenic not near genes chr3L 15406153 intergenic not near genes chr3L_9_15405001 chr3L_15405001 RAL-406 1726 chr3L 15423741 15423780 chr3L 15426605 15426616 opus 11 2861 6.5 3.5 5.0 1.8 2875 chr3L 15423741 intergenic not near genes chr3L 15425178 intergenic not near genes chr3L 15426616 intergenic not near genes chr3L_11_15425001 chr3L_15425001 RAL-406 1727 chr3L 15466022 15466028 chr3L 15466124 15466130 7 101 8.0 0.0 4.0 1.4 108 chr3L 15466022 intergenic not near genes chr3L 15466076 intergenic not near genes chr3L 15466130 intergenic not near genes chr3L_7_15465001 chr3L_15465001 RAL-406 1728 chr3L 15466032 15466133 chr3L 15466122 15466239 7 104 0.0 0.0 0.0 7.0 207 chr3L 15466032 intergenic not near genes chr3L 15466136 intergenic not near genes chr3L 15466239 intergenic not near genes chr3L_7_15465001 chr3L_15465001 RAL-406 1729 chr3L 15600151 15600197 chr3L 15600254 15600318 12 119 5.0 0.0 2.5 3.4 167 chr3L 15600151 intron RhoGAP71E + chr3L 15600234 intron RhoGAP71E + chr3L 15600318 intron RhoGAP71E + chr3L_12_15600001 chr3L_15600001 RAL-406 1730 chr3L 15617776 15617807 chr3L 15617981 15618014 7 201 5.0 4.5 4.8 1.2 238 chr3L 15617776 intron comm3 - chr3L 15617895 intron comm3 - chr3L 15618014 intron comm3 - chr3L_7_15615001 chr3L_15615001 RAL-406 1731 chr3L 15641788 15641813 chr3L 15641893 15641908 10 104 0.0 3.0 1.5 4.0 120 chr3L 15641788 intron comm3 - chr3L 15641848 intron comm3 - chr3L 15641908 intron comm3 - chr3L_10_15640001 chr3L_15640001 RAL-406 1732 chr3L 15737369 15737401 chr3L 15737479 15737506 12 107 5.0 6.0 5.5 1.8 137 chr3L 15737369 intergenic not near genes chr3L 15737438 intergenic not near genes chr3L 15737506 intergenic not near genes chr3L_12_15735001 chr3L_15735001 RAL-406 1733 chr3L 15760666 15760714 chr3L 15760766 15760776 4 85 4.0 0.5 2.2 1.2 110 chr3L 15760666 intergenic not near genes chr3L 15760721 intergenic not near genes chr3L 15760776 intergenic not near genes chr3L_4_15760001 chr3L_15760001 RAL-406 1734 chr3L 15778498 15778549 chr3L 15778669 15778720 12 170 6.0 3.5 4.8 2.1 222 chr3L 15778498 intergenic not near genes chr3L 15778609 intergenic not near genes chr3L 15778720 intergenic not near genes chr3L_12_15775001 chr3L_15775001 RAL-406 1735 chr3L 15787962 15787989 chr3L 15788053 15788085 4 87 4.0 6.5 5.2 0.6 123 chr3L 15787962 intergenic not near genes chr3L 15788024 intergenic not near genes chr3L 15788085 intergenic not near genes chr3L_4_15785001 chr3L_15785001 RAL-406 1736 chr3L 15833829 15833871 chr3L 15834239 15834292 18 416 29.0 6.5 17.8 1.0 463 chr3L 15833829 3` UTR,3` UTR CG12713 +,CG18081 - chr3L 15834060 3` UTR CG18081 - chr3L 15834292 3` UTR CG18081 - chr3L_18_15830001 chr3L_15830001 RAL-406 1737 chr3L 15833799 15833853 chr3L 15834018 15834072 32 221 30.5 24.5 27.5 1.1 273 chr3L 15833799 3` UTR,3` UTR CG12713 +,CG18081 - chr3L 15833936 3` UTR,3` UTR CG12713 +,CG18081 - chr3L 15834072 3` UTR CG18081 - chr3L_32_15830001 chr3L_15830001 RAL-406 1738 chr3L 15896071 15896121 chr3L 15896180 15896230 12 98 1.0 4.0 2.5 3.4 159 chr3L 15896071 intron pHCl - chr3L 15896150 intron pHCl - chr3L 15896230 intron pHCl - chr3L_12_15895001 chr3L_15895001 RAL-406 1739 chr3L 15929178 15929226 chr3L 15938345 15938393 roo 27 9166 3.5 5.0 4.2 5.2 9215 chr3L 15929178 intron Pka-C3 - chr3L 15933786 intron Pka-C3 - chr3L 15938393 intron Pka-C3 - chr3L_27_15930001 chr3L_15930001 RAL-406 1740 chr3L 15981654 15981709 chr3L 15981760 15981815 8 106 4.0 6.0 5.0 1.3 161 chr3L 15981654 intron,3` UTR brm -,CG17027 + chr3L 15981734 intron,3` UTR brm -,CG17027 + chr3L 15981815 intron,3` UTR brm -,CG17027 + chr3L_8_15980001 chr3L_15980001 RAL-406 1741 chr3L 16051179 16051231 chr3L 16051564 16051616 20 380 6.5 4.5 5.5 3.1 437 chr3L 16051179 intergenic th - chr3L 16051398 intergenic th - chr3L 16051616 intergenic Mbs + chr3L_20_16050001 chr3L_16050001 RAL-406 1742 chr3L 16158804 16158809 chr3L 16158909 16158914 5 105 1.5 8.5 5.0 0.8 110 chr3L 16158804 intron CG5151 - chr3L 16158859 intron CG5151 - chr3L 16158914 intron CG5151 - chr3L_5_16155001 chr3L_16155001 RAL-406 1743 chr3L 16158811 16158836 chr3L 16158895 16158941 12 99 0.5 7.5 4.0 2.4 130 chr3L 16158811 intron CG5151 - chr3L 16158876 intron CG5151 - chr3L 16158941 intron CG5151 - chr3L_12_16155001 chr3L_16155001 RAL-406 1744 chr3L 16184088 16184138 chr3L 16188927 16188952 X-element 25 4835 6.5 6.0 6.2 3.5 4864 chr3L 16184088 intergenic not near genes chr3L 16186520 intergenic not near genes chr3L 16188952 intergenic not near genes chr3L_25_16185001 chr3L_16185001 RAL-406 1745 chr3L 16240771 16240774 chr3L 16240923 16240926 4 152 1.0 12.5 6.8 0.5 155 chr3L 16240771 intergenic not near genes chr3L 16240848 intergenic not near genes chr3L 16240926 intergenic not near genes chr3L_4_16240001 chr3L_16240001 RAL-406 1746 chr3L 16279065 16279102 chr3L 16279166 16279203 20 99 3.5 5.0 4.2 3.8 138 chr3L 16279065 exon CG13050 - chr3L 16279134 intron CG13050 - chr3L 16279203 exon CG13050 - chr3L_20_16275001 chr3L_16275001 RAL-406 1747 chr3L 16431809 16431862 chr3L 16431923 16431967 15 112 3.5 3.5 3.5 3.3 158 chr3L 16431809 intron,intron CG33158 +,dsx-c73A - chr3L 16431888 intron,intron CG33158 +,dsx-c73A - chr3L 16431967 intron,intron CG33158 +,dsx-c73A - chr3L_15_16430001 chr3L_16430001 RAL-406 1748 chr3L 16443827 16443876 chr3L 16446187 16446204 Doc 12 2354 1.5 4.5 3.0 3.0 2377 chr3L 16443827 intron,intron CG33158 +,dsx-c73A - chr3L 16445016 intron,intron CG33158 +,dsx-c73A - chr3L 16446204 intron,intron CG33158 +,dsx-c73A - chr3L_12_16445001 chr3L_16445001 RAL-406 1749 chr3L 16446467 16446479 chr3L 16446591 16446603 5 122 8.5 17.0 12.8 0.4 136 chr3L 16446467 intron,intron CG33158 +,dsx-c73A - chr3L 16446535 intron,intron CG33158 +,dsx-c73A - chr3L 16446603 intron,intron CG33158 +,dsx-c73A - chr3L_5_16445001 chr3L_16445001 RAL-406 1750 chr3L 16493971 16494005 chr3L 16494492 16494529 jockey 8 525 6.5 9.0 7.8 0.9 558 chr3L 16493971 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494250 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494529 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_8_16490001 chr3L_16490001 RAL-406 1751 chr3L 16533543 16533576 chr3L 16533674 16533707 5 127 4.5 2.0 3.2 1.2 164 chr3L 16533543 intron CG43373 - chr3L 16533625 intron CG43373 - chr3L 16533707 intron CG43373 - chr3L_5_16530001 chr3L_16530001 RAL-406 1752 chr3L 16550040 16550068 chr3L 16550185 16550213 15 144 7.5 2.5 5.0 2.5 173 chr3L 16550040 intergenic not near genes chr3L 16550126 intergenic not near genes chr3L 16550213 intergenic not near genes chr3L_15_16550001 chr3L_16550001 RAL-406 1753 chr3L 16550072 16550085 chr3L 16550178 16550229 7 136 4.0 2.5 3.2 1.7 157 chr3L 16550072 intergenic not near genes chr3L 16550150 intergenic not near genes chr3L 16550229 intergenic not near genes chr3L_7_16550001 chr3L_16550001 RAL-406 1754 chr3L 16555893 16555929 chr3L 16556015 16556057 6 127 4.5 5.5 5.0 1.0 164 chr3L 16555893 intergenic not near genes chr3L 16555975 intergenic not near genes chr3L 16556057 intergenic not near genes chr3L_6_16555001 chr3L_16555001 RAL-406 1755 chr3L 16610663 16610717 chr3L 16610768 16610822 23 100 5.0 1.5 3.2 5.5 159 chr3L 16610663 3` UTR Su(P) - chr3L 16610742 exon Su(P) - chr3L 16610822 exon Su(P) - chr3L_23_16610001 chr3L_16610001 RAL-406 1756 chr3L 16616501 16616538 chr3L 16621845 16621886 297 11 5342 5.5 2.0 3.8 2.3 5385 chr3L 16616501 3` UTR Abl - chr3L 16619194 3` UTR Abl - chr3L 16621886 3` UTR Abl - chr3L_11_16615001 chr3L_16615001 RAL-406 1757 chr3L 16684002 16684046 chr3L 16689243 16689287 copia 20 5240 5.5 2.5 4.0 4.0 5285 chr3L 16684002 intron,intron Lasp -,CG43954 - chr3L 16686644 intron,intron Lasp -,CG43954 - chr3L 16689287 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_20_16685001 chr3L_16685001 RAL-406 1758 chr3L 16714823 16714872 chr3L 16714927 16714976 23 103 2.0 5.0 3.5 5.1 153 chr3L 16714823 intron Dab + chr3L 16714900 intron Dab + chr3L 16714976 intron Dab + chr3L_23_16710001 chr3L_16710001 RAL-406 1759 chr3L 16757621 16757666 chr3L 16757731 16757776 26 109 8.5 7.5 8.0 2.9 155 chr3L 16757621 intergenic not near genes chr3L 16757698 intergenic not near genes chr3L 16757776 intergenic not near genes chr3L_26_16755001 chr3L_16755001 RAL-406 1760 chr3L 16764556 16764611 chr3L 16764669 16764738 13 122 8.0 0.5 4.2 2.5 182 chr3L 16764556 intergenic not near genes chr3L 16764647 intergenic not near genes chr3L 16764738 intergenic not near genes chr3L_13_16760001 chr3L_16760001 RAL-406 1761 chr3L 16766848 16766865 chr3L 16767083 16767136 5 249 0.0 2.0 1.0 2.5 288 chr3L 16766848 intron Nrt + chr3L 16766992 intron Nrt + chr3L 16767136 intron Nrt + chr3L_5_16765001 chr3L_16765001 RAL-406 1762 chr3L 16800561 16800610 chr3L 16800719 16800761 9 156 5.0 4.0 4.5 1.6 200 chr3L 16800561 intron CG9674 - chr3L 16800661 intron CG9674 - chr3L 16800761 intron CG9674 - chr3L_9_16800001 chr3L_16800001 RAL-406 1763 chr3L 16808024 16808046 chr3L 16808120 16808142 10 96 8.0 5.5 6.8 1.3 118 chr3L 16808024 intron nudC + chr3L 16808083 intron nudC + chr3L 16808142 intron nudC + chr3L_10_16805001 chr3L_16805001 RAL-406 1764 chr3L 16808050 16808074 chr3L 16808119 16808173 4 90 5.0 5.5 5.2 0.6 123 chr3L 16808050 intron nudC + chr3L 16808112 intron nudC + chr3L 16808173 intron nudC + chr3L_4_16805001 chr3L_16805001 RAL-406 1765 chr3L 16815838 16815889 chr3L 16815937 16815990 10 101 0.0 6.0 3.0 2.5 152 chr3L 16815838 intron,intron nudC +,CG13024 - chr3L 16815914 intron,intron nudC +,CG13024 - chr3L 16815990 intron,intron nudC +,CG13024 - chr3L_10_16815001 chr3L_16815001 RAL-406 1766 chr3L 16817855 16817883 chr3L 16818015 16818043 11 156 8.5 5.5 7.0 1.4 188 chr3L 16817855 intron,intron nudC +,CG13024 - chr3L 16817949 intron,intron nudC +,CG13024 - chr3L 16818043 intron,intron nudC +,CG13024 - chr3L_11_16815001 chr3L_16815001 RAL-406 1767 chr3L 16817890 16817908 chr3L 16818014 16818044 10 152 3.0 5.5 4.2 1.9 154 chr3L 16817890 intron,intron nudC +,CG13024 - chr3L 16817967 intron,intron nudC +,CG13024 - chr3L 16818044 intron,intron nudC +,CG13024 - chr3L_10_16815001 chr3L_16815001 RAL-406 1768 chr3L 16836297 16836347 chr3L 16836409 16836459 9 110 3.0 0.0 1.5 3.6 162 chr3L 16836297 intergenic not near genes chr3L 16836378 intergenic not near genes chr3L 16836459 intergenic not near genes chr3L_9_16835001 chr3L_16835001 RAL-406 1769 chr3L 16845007 16845042 chr3L 16845140 16845175 6 132 2.0 6.5 4.2 1.2 168 chr3L 16845007 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845091 intergenic CG9669 -,CG9715 + chr3L 16845175 intergenic CG9669 -,CG9715 + chr3L_6_16845001 chr3L_16845001 RAL-406 1770 chr3L 16869566 16869605 chr3L 16869660 16869708 13 102 3.5 5.0 4.2 2.5 142 chr3L 16869566 intron Lmpt + chr3L 16869637 intron Lmpt + chr3L 16869708 intron Lmpt + chr3L_13_16865001 chr3L_16865001 RAL-406 1771 chr3L 16870846 16870895 chr3L 16870958 16871006 13 110 3.5 0.0 1.8 4.6 160 chr3L 16870846 intron Lmpt + chr3L 16870926 intron Lmpt + chr3L 16871006 intron Lmpt + chr3L_13_16870001 chr3L_16870001 RAL-406 1772 chr3L 16873321 16873351 chr3L 16873446 16873476 11 124 10.0 5.0 7.5 1.3 155 chr3L 16873321 intron Lmpt + chr3L 16873398 intron Lmpt + chr3L 16873476 intron Lmpt + chr3L_11_16870001 chr3L_16870001 RAL-406 1773 chr3L 16873356 16873364 chr3L 16873444 16873489 4 104 9.5 4.5 7.0 0.5 133 chr3L 16873356 intron Lmpt + chr3L 16873422 intron Lmpt + chr3L 16873489 intron Lmpt + chr3L_4_16870001 chr3L_16870001 RAL-406 1774 chr3L 16875354 16875392 chr3L 16875520 16875558 4 165 0.0 7.5 3.8 0.8 204 chr3L 16875354 intron Lmpt + chr3L 16875456 intron Lmpt + chr3L 16875558 intron Lmpt + chr3L_4_16875001 chr3L_16875001 RAL-406 1775 chr3L 16876436 16876475 chr3L 16876541 16876548 7 100 8.5 5.5 7.0 0.9 112 chr3L 16876436 intron Lmpt + chr3L 16876492 intron Lmpt + chr3L 16876548 intron Lmpt + chr3L_7_16875001 chr3L_16875001 RAL-406 1776 chr3L 16887463 16887516 chr3L 16887592 16887645 11 121 0.0 4.5 2.2 3.4 182 chr3L 16887463 intron Lmpt + chr3L 16887554 intron Lmpt + chr3L 16887645 intron Lmpt + chr3L_11_16885001 chr3L_16885001 RAL-406 1777 chr3L 16922635 16922640 chr3L 16922849 16922854 5 214 4.5 14.5 9.5 0.5 219 chr3L 16922635 intergenic Lmpt + chr3L 16922744 intergenic Lmpt + chr3L 16922854 intergenic Lmpt +,CG13028 + chr3L_5_16920001 chr3L_16920001 RAL-406 1778 chr3L 16945713 16945751 chr3L 16954886 16954898 roo 13 9162 2.0 4.0 3.0 3.2 9185 chr3L 16945713 exon Obp73a + chr3L 16950306 intergenic not near genes chr3L 16954898 5` UTR Nc73EF + chr3L_13_16950001 chr3L_16950001 RAL-406 1779 chr3L 17027150 17027153 chr3L 17027262 17027265 4 112 6.0 8.0 7.0 0.5 115 chr3L 17027150 intergenic Fit2 +,CG7730 + chr3L 17027208 intergenic Fit2 +,CG7730 + chr3L 17027265 intergenic Fit2 +,CG7730 + chr3L_4_17025001 chr3L_17025001 RAL-406 1780 chr3L 17027155 17027186 chr3L 17027257 17027298 17 109 2.5 7.5 5.0 2.8 143 chr3L 17027155 intergenic Fit2 +,CG7730 + chr3L 17027226 intergenic Fit2 +,CG7730 + chr3L 17027298 intergenic Fit2 +,CG7730 + chr3L_17_17025001 chr3L_17025001 RAL-406 1781 chr3L 17034918 17034967 chr3L 17035123 17035175 G2 23 205 3.0 7.5 5.2 3.7 257 chr3L 17034918 intergenic not near genes chr3L 17035046 intergenic not near genes chr3L 17035175 intergenic beg + chr3L_23_17035001 chr3L_17035001 RAL-406 1782 chr3L 17084984 17085031 chr3L 17094153 17094197 roo 24 9168 6.0 8.5 7.2 2.9 9213 chr3L 17084984 intron Rbp6 - chr3L 17089590 intron Rbp6 - chr3L 17094197 intron Rbp6 - chr3L_24_17085001 chr3L_17085001 RAL-406 1783 chr3L 17110325 17110341 chr3L 17110401 17110442 6 82 3.0 2.5 2.8 1.6 117 chr3L 17110325 intron Rbp6 - chr3L 17110384 intron Rbp6 - chr3L 17110442 intron Rbp6 - chr3L_6_17110001 chr3L_17110001 RAL-406 1784 chr3L 17120645 17120935 chr3L 17120729 17121007 21 91 6.0 4.0 5.0 3.5 362 chr3L 17120645 intron Rbp6 - chr3L 17120826 intron Rbp6 - chr3L 17121007 intron Rbp6 - chr3L_21_17120001 chr3L_17120001 RAL-406 1785 chr3L 17194438 17194442 chr3L 17194544 17194548 4 106 7.0 15.5 11.2 0.3 110 chr3L 17194438 intron Rbp6 - chr3L 17194493 intron Rbp6 - chr3L 17194548 intron Rbp6 - chr3L_4_17190001 chr3L_17190001 RAL-406 1786 chr3L 17203176 17203220 chr3L 17203293 17203337 10 114 1.5 4.0 2.8 2.6 161 chr3L 17203176 intron Rbp6 - chr3L 17203256 intron Rbp6 - chr3L 17203337 intron Rbp6 - chr3L_10_17200001 chr3L_17200001 RAL-406 1787 chr3L 17272231 17272262 chr3L 17272384 17272402 10 150 0.0 5.0 2.5 2.9 171 chr3L 17272231 intergenic not near genes chr3L 17272316 intergenic not near genes chr3L 17272402 intergenic not near genes chr3L_10_17270001 chr3L_17270001 RAL-406 1788 chr3L 17310047 17310088 chr3L 17310159 17310197 4 110 0.0 3.0 1.5 1.6 150 chr3L 17310047 intergenic not near genes chr3L 17310122 intergenic not near genes chr3L 17310197 intergenic not near genes chr3L_4_17310001 chr3L_17310001 RAL-406 1789 chr3L 17321725 17321750 chr3L 17321797 17321839 9 95 6.0 4.5 5.2 1.5 114 chr3L 17321725 intergenic not near genes chr3L 17321782 intergenic not near genes chr3L 17321839 intergenic not near genes chr3L_9_17320001 chr3L_17320001 RAL-406 1790 chr3L 17367420 17367456 chr3L 17367534 17367570 21 112 5.0 7.5 6.2 2.9 150 chr3L 17367420 intergenic CR45688 +,Cad74A - chr3L 17367495 intergenic CR45688 +,Cad74A - chr3L 17367570 intergenic Cad74A -,CR45688 + chr3L_21_17365001 chr3L_17365001 RAL-406 1791 chr3L 17408894 17408928 chr3L 17408990 17409024 15 95 12.5 7.5 10.0 1.4 130 chr3L 17408894 intron blot - chr3L 17408959 intron blot - chr3L 17409024 intron blot - chr3L_15_17405001 chr3L_17405001 RAL-406 1792 chr3L 17510725 17510766 chr3L 17510829 17510870 10 100 2.5 4.0 3.2 2.4 145 chr3L 17510725 exon Oatp74D + chr3L 17510798 intron Oatp74D + chr3L 17510870 intron Oatp74D + chr3L_10_17510001 chr3L_17510001 RAL-406 1793 chr3L 17516968 17517006 chr3L 17524539 17524545 412 5 7556 4.5 8.0 6.2 0.7 7577 chr3L 17516968 intron CG7564 + chr3L 17520756 intron CG7564 + chr3L 17524545 3` UTR CG7564 + chr3L_5_17520001 chr3L_17520001 RAL-406 1794 chr3L 17535794 17535847 chr3L 17535928 17535959 9 112 3.5 1.0 2.2 2.8 165 chr3L 17535794 intron Nedd4 + chr3L 17535876 intron Nedd4 + chr3L 17535959 intron Nedd4 + chr3L_9_17535001 chr3L_17535001 RAL-406 1795 chr3L 17580568 17580601 chr3L 17580764 17580797 11 195 8.5 0.0 4.2 2.1 229 chr3L 17580568 intron Eip74EF - chr3L 17580682 intron Eip74EF - chr3L 17580797 intron Eip74EF - chr3L_11_17580001 chr3L_17580001 RAL-406 1796 chr3L 17592788 17592821 chr3L 17592899 17592932 18 110 0.5 12.5 6.5 2.4 144 chr3L 17592788 intron Eip74EF - chr3L 17592860 intron Eip74EF - chr3L 17592932 intron Eip74EF - chr3L_18_17590001 chr3L_17590001 RAL-406 1797 chr3L 17646832 17646878 chr3L 17646929 17646975 15 97 4.0 6.0 5.0 2.5 143 chr3L 17646832 intergenic CG43085 - chr3L 17646904 intergenic CG43085 - chr3L 17646975 intergenic CG43085 -,Ndfip - chr3L_15_17645001 chr3L_17645001 RAL-406 1798 chr3L 17678881 17678900 chr3L 17678985 17679004 9 103 5.5 1.5 3.5 2.0 123 chr3L 17678881 intron CG34251 + chr3L 17678942 intron CG34251 + chr3L 17679004 intron CG34251 + chr3L_9_17675001 chr3L_17675001 RAL-406 1799 chr3L 17686669 17686697 chr3L 17686766 17686783 7 95 2.5 3.0 2.8 1.8 114 chr3L 17686669 intergenic not near genes chr3L 17686726 intergenic not near genes chr3L 17686783 intergenic not near genes chr3L_7_17685001 chr3L_17685001 RAL-406 1800 chr3L 17730831 17730841 chr3L 17738181 17738185 mdg1 6 7349 17.0 7.5 12.2 0.5 7354 chr3L 17730831 intron Ccn + chr3L 17734508 intron Ccn + chr3L 17738185 intron Ccn + chr3L_6_17730001 chr3L_17730001 RAL-406 1801 chr3L 17730845 17730884 chr3L 17738178 17738204 mdg1 24 7343 7.0 7.0 7.0 3.0 7359 chr3L 17730845 intron Ccn + chr3L 17734524 intron Ccn + chr3L 17738204 intron Ccn + chr3L_24_17730001 chr3L_17730001 RAL-406 1802 chr3L 17753332 17753352 chr3L 17753438 17753458 6 106 5.5 5.5 5.5 0.9 126 chr3L 17753332 intron Adgf-A - chr3L 17753395 intron Adgf-A - chr3L 17753458 intron Adgf-A - chr3L_6_17750001 chr3L_17750001 RAL-406 1803 chr3L 17789826 17789834 chr3L 17789922 17789930 10 96 9.0 5.5 7.2 1.2 104 chr3L 17789826 intergenic not near genes chr3L 17789878 intergenic not near genes chr3L 17789930 intergenic not near genes chr3L_10_17785001 chr3L_17785001 RAL-406 1804 chr3L 17789835 17789877 chr3L 17789921 17789973 18 93 4.0 5.0 4.5 3.3 138 chr3L 17789835 intergenic not near genes chr3L 17789904 intergenic not near genes chr3L 17789973 intergenic not near genes chr3L_18_17785001 chr3L_17785001 RAL-406 1805 chr3L 17790613 17790630 chr3L 17790892 17790914 6 283 4.5 7.0 5.8 0.9 301 chr3L 17790613 intergenic CG42815 - chr3L 17790764 intergenic CG42815 - chr3L 17790914 intergenic CG42815 - chr3L_6_17790001 chr3L_17790001 RAL-406 1806 chr3L 17799792 17799840 chr3L 17801599 17801647 S-element 22 1804 4.5 6.5 5.5 3.4 1855 chr3L 17799792 intron NUCB1 - chr3L 17800720 intron NUCB1 - chr3L 17801647 intron NUCB1 - chr3L_22_17800001 chr3L_17800001 RAL-406 1807 chr3L 17834307 17834353 chr3L 17834491 17834537 20 183 0.0 5.0 2.5 5.7 230 chr3L 17834307 intron Grd + chr3L 17834422 intron Grd + chr3L 17834537 intron Grd + chr3L_20_17830001 chr3L_17830001 RAL-406 1808 chr3L 17837607 17837622 chr3L 17837714 17837720 6 105 1.0 0.5 0.8 3.3 113 chr3L 17837607 exon Grd + chr3L 17837664 intron Grd + chr3L 17837720 intron Grd + chr3L_6_17835001 chr3L_17835001 RAL-406 1809 chr3L 17837623 17837655 chr3L 17837712 17837757 7 100 0.5 0.5 0.5 4.7 134 chr3L 17837623 exon Grd + chr3L 17837690 intron Grd + chr3L 17837757 exon Grd + chr3L_7_17835001 chr3L_17835001 RAL-406 1810 chr3L 17884672 17884708 chr3L 17884792 17884828 17 117 4.5 4.0 4.2 3.3 156 chr3L 17884672 intergenic CG5506 - chr3L 17884750 intergenic CG5506 - chr3L 17884828 intergenic CG5506 - chr3L_17_17880001 chr3L_17880001 RAL-406 1811 chr3L 17914324 17914352 chr3L 17914986 17915000 4 662 4.5 3.0 3.8 0.8 676 chr3L 17914324 intergenic not near genes chr3L 17914662 intergenic not near genes chr3L 17915000 intergenic not near genes chr3L_4_17910001 chr3L_17910001 RAL-406 1812 chr3L 17918368 17918384 chr3L 17921189 17921207 opus 8 2822 4.0 5.5 4.8 1.4 2839 chr3L 17918368 intergenic not near genes chr3L 17919788 intergenic not near genes chr3L 17921207 intergenic not near genes chr3L_8_17915001 chr3L_17915001 RAL-406 1813 chr3L 17918387 17918398 chr3L 17921174 17921221 opus 4 2814 3.0 2.5 2.8 1.1 2834 chr3L 17918387 intergenic not near genes chr3L 17919804 intergenic not near genes chr3L 17921221 intergenic not near genes chr3L_4_17915001 chr3L_17915001 RAL-406 1814 chr3L 18000653 18000692 chr3L 18000750 18000789 15 96 7.0 5.5 6.2 2.1 136 chr3L 18000653 intron Eip75B - chr3L 18000721 intron Eip75B - chr3L 18000789 intron Eip75B - chr3L_15_18000001 chr3L_18000001 RAL-406 1815 chr3L 18000693 18000708 chr3L 18000749 18000785 5 85 4.5 5.5 5.0 0.8 92 chr3L 18000693 intron Eip75B - chr3L 18000739 intron Eip75B - chr3L 18000785 intron Eip75B - chr3L_5_18000001 chr3L_18000001 RAL-406 1816 chr3L 18006207 18006254 chr3L 18006351 18006398 21 140 8.0 4.5 6.2 2.9 191 chr3L 18006207 intron Eip75B - chr3L 18006302 intron Eip75B - chr3L 18006398 intron Eip75B - chr3L_21_18005001 chr3L_18005001 RAL-406 1817 chr3L 18029939 18029986 chr3L 18030036 18030062 16 94 7.5 0.0 3.8 3.3 123 chr3L 18029939 intron Eip75B - chr3L 18030000 intron Eip75B - chr3L 18030062 intron Eip75B - chr3L_16_18030001 chr3L_18030001 RAL-406 1818 chr3L 18047698 18047734 chr3L 18056769 18056811 roo 17 9074 6.0 4.5 5.2 2.7 9113 chr3L 18047698 intron Eip75B - chr3L 18052254 intron Eip75B - chr3L 18056811 intron Eip75B - chr3L_17_18050001 chr3L_18050001 RAL-406 1819 chr3L 18081003 18081015 chr3L 18081105 18081117 5 102 5.5 6.0 5.8 0.7 114 chr3L 18081003 intergenic CR43253 - chr3L 18081060 intergenic CR43253 - chr3L 18081117 intergenic CR43253 - chr3L_5_18080001 chr3L_18080001 RAL-406 1820 chr3L 18106250 18106276 chr3L 18106378 18106415 11 137 5.5 0.0 2.8 2.9 165 chr3L 18106250 intergenic CG13698 -,mRpS26 + chr3L 18106332 intergenic CG13698 -,mRpS26 + chr3L 18106415 intergenic mRpS26 +,CG13698 - chr3L_11_18105001 chr3L_18105001 RAL-406 1821 chr3L 18107595 18107651 chr3L 18107708 18107723 29 109 5.0 9.0 7.0 3.6 128 chr3L 18107595 intergenic mRpS26 +,CG5147 - chr3L 18107659 intergenic mRpS26 +,CG5147 - chr3L 18107723 intergenic CG5147 -,mRpS26 + chr3L_29_18105001 chr3L_18105001 RAL-406 1822 chr3L 18119611 18119674 chr3L 18119743 18119792 16 122 0.0 4.5 2.2 5.0 181 chr3L 18119611 intron CG7341 + chr3L 18119702 intron CG7341 + chr3L 18119792 5` UTR CG7341 + chr3L_16_18115001 chr3L_18115001 RAL-406 1823 chr3L 18133009 18133017 chr3L 18133113 18133127 6 108 10.0 1.0 5.5 0.9 118 chr3L 18133009 intergenic Cyp312a1 - chr3L 18133068 intergenic Cyp312a1 - chr3L 18133127 intergenic Cyp312a1 - chr3L_6_18130001 chr3L_18130001 RAL-406 1824 chr3L 18133025 18133047 chr3L 18133110 18133156 13 106 4.0 1.0 2.5 3.7 131 chr3L 18133025 intergenic Cyp312a1 - chr3L 18133090 intergenic Cyp312a1 - chr3L 18133156 intergenic Cyp312a1 - chr3L_13_18130001 chr3L_18130001 RAL-406 1825 chr3L 18150303 18150319 chr3L 18150420 18150436 7 117 3.0 6.5 4.8 1.2 133 chr3L 18150303 intron CG7330 + chr3L 18150370 intron CG7330 + chr3L 18150436 intron CG7330 + chr3L_7_18150001 chr3L_18150001 RAL-406 1826 chr3L 18150327 18150345 chr3L 18150415 18150462 8 110 2.0 4.0 3.0 2.0 135 chr3L 18150327 intron CG7330 + chr3L 18150394 intron CG7330 + chr3L 18150462 intron CG7330 + chr3L_8_18150001 chr3L_18150001 RAL-406 1827 chr3L 18152713 18152720 chr3L 18152844 18152851 4 131 5.0 4.5 4.8 0.7 138 chr3L 18152713 intron CG7330 + chr3L 18152782 intron CG7330 + chr3L 18152851 intron CG7330 + chr3L_4_18150001 chr3L_18150001 RAL-406 1828 chr3L 18160656 18160665 chr3L 18160758 18160767 6 102 10.5 6.5 8.5 0.6 111 chr3L 18160656 intron CG13699 - chr3L 18160712 intron CG13699 - chr3L 18160767 intron CG13699 - chr3L_6_18160001 chr3L_18160001 RAL-406 1829 chr3L 18172669 18172704 chr3L 18172765 18172800 10 94 7.0 7.0 7.0 1.2 131 chr3L 18172669 intron W - chr3L 18172734 intron W - chr3L 18172800 intron W - chr3L_10_18170001 chr3L_18170001 RAL-406 1830 chr3L 18175800 18175839 chr3L 18176059 18176098 14 258 5.0 5.0 5.0 2.3 298 chr3L 18175800 intron W - chr3L 18175949 intron W - chr3L 18176098 intron W - chr3L_14_18175001 chr3L_18175001 RAL-406 1831 chr3L 18198929 18198931 chr3L 24821492 24821494 21 6622563 0.0 15.0 7.5 2.5 6622565 chr3L 18198929 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821494 intergenic not near genes chr3L_21_21510001 chr3L_21510001 RAL-406 1832 chr3L 18203578 18203630 chr3L 18203693 18203733 13 107 9.5 0.0 4.8 2.2 155 chr3L 18203578 3` UTR CG7320 + chr3L 18203656 intergenic CG7320 + chr3L 18203733 intergenic CG7320 + chr3L_13_18200001 chr3L_18200001 RAL-406 1833 chr3L 18223143 18223187 chr3L 18223246 18223302 16 104 4.5 0.5 2.5 4.6 159 chr3L 18223143 intergenic not near genes chr3L 18223222 intergenic not near genes chr3L 18223302 intergenic not near genes chr3L_16_18220001 chr3L_18220001 RAL-406 1834 chr3L 18267831 18267997 chr3L 18267915 18268078 34 94 1.5 2.5 2.0 11.3 247 chr3L 18267831 intergenic not near genes chr3L 18267954 intergenic not near genes chr3L 18268078 intergenic not near genes chr3L_34_18265001 chr3L_18265001 RAL-406 1835 chr3L 18287949 18287953 chr3L 18288050 18288054 4 101 0.0 11.5 5.8 0.6 105 chr3L 18287949 intergenic not near genes chr3L 18288002 intergenic not near genes chr3L 18288054 intergenic not near genes chr3L_4_18285001 chr3L_18285001 RAL-406 1836 chr3L 18301331 18301376 chr3L 18301440 18301485 14 107 0.5 1.5 1.0 7.0 154 chr3L 18301331 intergenic CG13700 - chr3L 18301408 intergenic CG13700 - chr3L 18301485 intergenic CG13700 - chr3L_14_18300001 chr3L_18300001 RAL-406 1837 chr3L 18343534 18343541 chr3L 18343662 18343669 6 128 4.5 7.5 6.0 0.9 135 chr3L 18343534 intergenic not near genes chr3L 18343602 intergenic not near genes chr3L 18343669 intergenic not near genes chr3L_6_18340001 chr3L_18340001 RAL-406 1838 chr3L 18420063 18420094 chr3L 18420157 18420187 5 96 1.5 3.0 2.2 1.6 124 chr3L 18420063 intergenic not near genes chr3L 18420125 intergenic not near genes chr3L 18420187 intergenic not near genes chr3L_5_18420001 chr3L_18420001 RAL-406 1839 chr3L 18436041 18436092 chr3L 18436159 18436210 24 117 6.5 5.0 5.8 3.5 169 chr3L 18436041 intergenic not near genes chr3L 18436126 intergenic not near genes chr3L 18436210 intergenic not near genes chr3L_24_18435001 chr3L_18435001 RAL-406 1840 chr3L 18445231 18445243 chr3L 18445329 18445341 6 98 12.5 2.0 7.2 0.7 110 chr3L 18445231 intergenic not near genes chr3L 18445286 intergenic not near genes chr3L 18445341 intergenic not near genes chr3L_6_18445001 chr3L_18445001 RAL-406 1841 chr3L 18445244 18445281 chr3L 18445326 18445357 7 88 5.0 2.0 3.5 1.6 113 chr3L 18445244 intergenic not near genes chr3L 18445300 intergenic not near genes chr3L 18445357 intergenic not near genes chr3L_7_18445001 chr3L_18445001 RAL-406 1842 chr3L 18448598 18448621 chr3L 18448710 18448733 11 111 13.5 11.0 12.2 0.8 135 chr3L 18448598 intergenic not near genes chr3L 18448666 intergenic not near genes chr3L 18448733 intergenic not near genes chr3L_11_18445001 chr3L_18445001 RAL-406 1843 chr3L 18506118 18506150 chr3L 18509601 18509633 F-element 16 3480 4.0 6.5 5.2 2.6 3515 chr3L 18506118 intergenic not near genes chr3L 18507876 intergenic not near genes chr3L 18509633 intergenic not near genes chr3L_16_18505001 chr3L_18505001 RAL-406 1844 chr3L 18528608 18528659 chr3L 18537789 18537802 roo 20 9176 6.5 5.5 6.0 2.9 9194 chr3L 18528608 intergenic not near genes chr3L 18533205 intergenic not near genes chr3L 18537802 intergenic not near genes chr3L_20_18530001 chr3L_18530001 RAL-406 1845 chr3L 18538624 18538659 chr3L 18539132 18539154 6 501 3.5 5.5 4.5 1.1 530 chr3L 18538624 intergenic not near genes chr3L 18538889 intergenic not near genes chr3L 18539154 intergenic not near genes chr3L_6_18535001 chr3L_18535001 RAL-406 1846 chr3L 18593930 18593978 chr3L 18595930 18595963 Doc 12 1997 6.5 2.0 4.2 2.3 2033 chr3L 18593930 intergenic term - chr3L 18594946 intergenic not near genes chr3L 18595963 intergenic CR45389 + chr3L_12_18590001 chr3L_18590001 RAL-406 1847 chr3L 18606732 18606779 chr3L 18606950 18606960 19 212 3.0 3.5 3.2 4.5 228 chr3L 18606732 intron,intron,exon CG13380 -,CG4174 -,CG18233 + chr3L 18606846 intron,intron,exon CG13380 -,CG4174 -,CG18233 + chr3L 18606960 intron,intron,exon CG13380 -,CG4174 -,CG18233 + chr3L_19_18605001 chr3L_18605001 RAL-406 1848 chr3L 18638570 18638608 chr3L 18638684 18638722 12 112 1.5 4.5 3.0 3.0 152 chr3L 18638570 intron MYPT-75D + chr3L 18638646 intron MYPT-75D + chr3L 18638722 intron MYPT-75D + chr3L_12_18635001 chr3L_18635001 RAL-406 1849 chr3L 18647673 18647707 chr3L 18647786 18647789 10 109 10.5 3.5 7.0 1.2 116 chr3L 18647673 intron MYPT-75D + chr3L 18647731 intron MYPT-75D + chr3L 18647789 intron MYPT-75D + chr3L_10_18645001 chr3L_18645001 RAL-406 1850 chr3L 18710740 18710790 chr3L 18718712 18718762 Stalker2 23 7968 7.0 5.0 6.0 3.3 8022 chr3L 18710740 intergenic not near genes chr3L 18714751 intergenic not near genes chr3L 18718762 intergenic not near genes chr3L_23_18710001 chr3L_18710001 RAL-406 1851 chr3L 18721773 18721779 chr3L 18721884 18721888 6 110 3.0 7.0 5.0 1.0 115 chr3L 18721773 intergenic CG12477 - chr3L 18721830 intergenic CG12477 - chr3L 18721888 intergenic CG12477 - chr3L_6_18720001 chr3L_18720001 RAL-406 1852 chr3L 18721782 18721803 chr3L 18721867 18721914 9 105 1.5 5.5 3.5 2.0 132 chr3L 18721782 intergenic CG12477 - chr3L 18721848 intergenic CG12477 - chr3L 18721914 3` UTR CG12477 - chr3L_9_18720001 chr3L_18720001 RAL-406 1853 chr3L 18772390 18772437 chr3L 18781091 18781133 roo 21 8700 6.0 1.5 3.8 4.4 8743 chr3L 18772390 intron ftz-f1 - chr3L 18776762 intron ftz-f1 - chr3L 18781133 intron ftz-f1 - chr3L_21_18775001 chr3L_18775001 RAL-406 1854 chr3L 18797291 18797337 chr3L 18797395 18797441 10 102 9.0 3.0 6.0 1.4 150 chr3L 18797291 intron ftz-f1 - chr3L 18797366 intron ftz-f1 - chr3L 18797441 intron ftz-f1 - chr3L_10_18795001 chr3L_18795001 RAL-406 1855 chr3L 18817205 18817244 chr3L 18817342 18817371 12 134 3.0 4.5 3.8 2.5 166 chr3L 18817205 intron CG14073 - chr3L 18817288 intron CG14073 - chr3L 18817371 intron CG14073 - chr3L_12_18815001 chr3L_18815001 RAL-406 1856 chr3L 18833764 18833812 chr3L 18834948 18834964 1360 13 1178 2.5 5.5 4.0 2.6 1200 chr3L 18833764 intron Indy - chr3L 18834364 intron Indy - chr3L 18834964 intron Indy - chr3L_13_18830001 chr3L_18830001 RAL-406 1857 chr3L 18924465 18924506 chr3L 18924555 18924602 12 95 4.0 2.0 3.0 3.0 137 chr3L 18924465 intron CG32204 - chr3L 18924534 intron CG32204 - chr3L 18924602 intron CG32204 - chr3L_12_18920001 chr3L_18920001 RAL-406 1858 chr3L 18933607 18933615 chr3L 18933721 18933729 6 114 17.5 9.5 13.5 0.4 122 chr3L 18933607 intron CG32204 - chr3L 18933668 intron CG32204 - chr3L 18933729 intron CG32204 - chr3L_6_18930001 chr3L_18930001 RAL-406 1859 chr3L 18933626 18933657 chr3L 18933719 18933770 9 102 8.0 8.5 8.2 1.0 144 chr3L 18933626 intron CG32204 - chr3L 18933698 intron CG32204 - chr3L 18933770 intron CG32204 - chr3L_9_18930001 chr3L_18930001 RAL-406 1860 chr3L 18959979 18960026 chr3L 18960080 18960127 10 100 5.0 7.5 6.2 1.4 148 chr3L 18959979 intergenic not near genes chr3L 18960053 intergenic not near genes chr3L 18960127 intergenic not near genes chr3L_10_18960001 chr3L_18960001 RAL-406 1861 chr3L 19008857 19008877 chr3L 19009177 19009204 jockey 6 339 4.5 1.5 3.0 1.5 347 chr3L 19008857 intron nkd - chr3L 19009030 intron nkd - chr3L 19009204 intron nkd - chr3L_6_19005001 chr3L_19005001 RAL-406 1862 chr3L 19015161 19015216 chr3L 19015265 19015316 8 100 2.0 1.5 1.8 2.9 155 chr3L 19015161 intron nkd - chr3L 19015238 intron nkd - chr3L 19015316 intron nkd - chr3L_8_19015001 chr3L_19015001 RAL-406 1863 chr3L 19033733 19033775 chr3L 19033832 19033875 11 97 5.0 5.5 5.2 1.8 142 chr3L 19033733 intron nkd - chr3L 19033804 intron nkd - chr3L 19033875 intron nkd - chr3L_11_19030001 chr3L_19030001 RAL-406 1864 chr3L 19062000 19062028 chr3L 19066465 19066512 13 4472 13.5 32.0 22.8 0.5 4512 chr3L 19062000 intron CG3797 - chr3L 19064256 intron CG6812 + chr3L 19066512 3` UTR Mkp3 - chr3L_13_19060001 chr3L_19060001 RAL-406 1865 chr3L 19115620 19115666 chr3L 19115820 19115860 BS 10 196 6.5 2.0 4.2 1.9 240 chr3L 19115620 intron CG14082 - chr3L 19115740 intron CG14082 - chr3L 19115860 intron CG14082 - chr3L_10_19115001 chr3L_19115001 RAL-406 1866 chr3L 19117032 19117067 chr3L 19124489 19124504 mdg1 6 7454 8.0 3.5 5.8 0.9 7472 chr3L 19117032 intron CG14082 - chr3L 19120768 intron CG14082 - chr3L 19124504 intron CG14082 - chr3L_6_19120001 chr3L_19120001 RAL-406 1867 chr3L 19138131 19138155 chr3L 19138233 19138259 12 108 0.0 6.5 3.2 2.9 128 chr3L 19138131 intron CG14082 - chr3L 19138195 intron CG14082 - chr3L 19138259 intron CG14082 - chr3L_12_19135001 chr3L_19135001 RAL-406 1868 chr3L 19138730 19138784 chr3L 19138858 19138887 20 117 3.0 3.5 3.2 4.8 157 chr3L 19138730 intron CG14082 - chr3L 19138808 intron CG14082 - chr3L 19138887 5` UTR CG14082 - chr3L_20_19135001 chr3L_19135001 RAL-406 1869 chr3L 19208043 19208090 chr3L 19209437 19209453 Doc 11 1389 1.5 3.5 2.5 3.1 1410 chr3L 19208043 intron fz2 - chr3L 19208748 intron fz2 - chr3L 19209453 intron fz2 - chr3L_11_19205001 chr3L_19205001 RAL-406 1870 chr3L 19216498 19216536 chr3L 19216595 19216603 14 94 7.5 7.0 7.2 1.7 105 chr3L 19216498 intron fz2 - chr3L 19216550 intron fz2 - chr3L 19216603 intron fz2 - chr3L_14_19215001 chr3L_19215001 RAL-406 1871 chr3L 19220632 19220633 chr3L 22908066 22908067 4 3687434 15.0 38.5 26.8 0.1 3687435 chr3L 19220632 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_4_21060001 chr3L_21060001 RAL-406 1872 chr3L 19220637 19220637 chr3L 22908066 22908066 6 3687429 15.0 38.5 26.8 0.2 3687429 chr3L 19220637 intron fz2 - chr3L 21064352 intron siz + chr3L 22908066 intergenic not near genes chr3L_6_21060001 chr3L_21060001 RAL-406 1873 chr3L 19325398 19325433 chr3L 19325480 19325530 9 93 4.0 10.0 7.0 1.1 132 chr3L 19325398 intron pip - chr3L 19325464 intron pip - chr3L 19325530 intron pip - chr3L_9_19325001 chr3L_19325001 RAL-406 1874 chr3L 19338352 19338402 chr3L 19338464 19338514 10 111 0.0 5.5 2.8 2.6 162 chr3L 19338352 intergenic not near genes chr3L 19338433 intergenic not near genes chr3L 19338514 intergenic not near genes chr3L_10_19335001 chr3L_19335001 RAL-406 1875 chr3L 19342742 19342771 chr3L 19342853 19342882 15 110 6.0 4.0 5.0 2.5 140 chr3L 19342742 3` UTR CG32206 - chr3L 19342812 3` UTR CG32206 - chr3L 19342882 3` UTR CG32206 - chr3L_15_19340001 chr3L_19340001 RAL-406 1876 chr3L 19365918 19365927 chr3L 19366020 19366044 11 113 0.0 8.0 4.0 2.2 126 chr3L 19365918 intron CG32206 - chr3L 19365981 intron CG32206 - chr3L 19366044 intron CG32206 - chr3L_11_19365001 chr3L_19365001 RAL-406 1877 chr3L 19369826 19369868 chr3L 19369928 19369963 4 94 4.5 8.0 6.2 0.6 137 chr3L 19369826 intron CG32206 - chr3L 19369894 intron CG32206 - chr3L 19369963 intron CG32206 - chr3L_4_19365001 chr3L_19365001 RAL-406 1878 chr3L 19404962 19404980 chr3L 19405059 19405076 7 97 6.5 6.0 6.2 1.0 114 chr3L 19404962 intron CG32206 - chr3L 19405019 intron CG32206 - chr3L 19405076 intron CG32206 - chr3L_7_19405001 chr3L_19405001 RAL-406 1879 chr3L 19404982 19404998 chr3L 19405052 19405095 8 89 5.5 6.0 5.8 1.2 113 chr3L 19404982 intron CG32206 - chr3L 19405038 intron CG32206 - chr3L 19405095 intron CG32206 - chr3L_8_19405001 chr3L_19405001 RAL-406 1880 chr3L 19430376 19430431 chr3L 19430474 19430529 17 90 5.5 5.5 5.5 2.6 153 chr3L 19430376 intergenic not near genes chr3L 19430452 intergenic not near genes chr3L 19430529 intergenic not near genes chr3L_17_19430001 chr3L_19430001 RAL-406 1881 chr3L 19439282 19439290 chr3L 19439382 19439396 4 104 3.0 13.5 8.2 0.4 114 chr3L 19439282 intergenic not near genes chr3L 19439339 intergenic not near genes chr3L 19439396 intergenic not near genes chr3L_4_19435001 chr3L_19435001 RAL-406 1882 chr3L 19488482 19488503 chr3L 19488558 19488605 7 98 10.0 3.0 6.5 0.9 123 chr3L 19488482 intergenic pncr009:3L -,CG32212 + chr3L 19488544 intergenic pncr009:3L -,CG32212 + chr3L 19488605 intergenic pncr009:3L -,CG32212 + chr3L_7_19485001 chr3L_19485001 RAL-406 1883 chr3L 19695429 19695458 chr3L 19695508 19695557 4 84 1.0 4.5 2.8 1.1 128 chr3L 19695429 intergenic verm - chr3L 19695493 intergenic verm - chr3L 19695557 intergenic verm - chr3L_4_19695001 chr3L_19695001 RAL-406 1884 chr3L 19792343 19792367 chr3L 19792458 19792482 10 113 15.0 12.0 13.5 0.7 139 chr3L 19792343 intron,intron CG42637 -,Gyc76C - chr3L 19792412 intron,intron CG42637 -,Gyc76C - chr3L 19792482 intron,intron CG42637 -,Gyc76C - chr3L_10_19790001 chr3L_19790001 RAL-406 1885 chr3L 19820284 19820314 chr3L 19827853 19827878 412 10 7568 7.0 4.5 5.8 1.5 7594 chr3L 19820284 intron Deaf1 + chr3L 19824081 intron Deaf1 + chr3L 19827878 intron Deaf1 + chr3L_10_19820001 chr3L_19820001 RAL-406 1886 chr3L 19848517 19848534 chr3L 19857696 19857720 roo 4 9196 8.0 2.0 5.0 0.7 9203 chr3L 19848517 intron Papss + chr3L 19853118 intron Papss + chr3L 19857720 intron Papss + chr3L_4_19850001 chr3L_19850001 RAL-406 1887 chr3L 19861823 19861852 chr3L 19863609 19863660 S-element 12 1794 4.5 5.0 4.8 2.1 1837 chr3L 19861823 5` UTR CR45433 + chr3L 19862742 intergenic not near genes chr3L 19863660 intergenic not near genes chr3L_12_19860001 chr3L_19860001 RAL-406 1888 chr3L 19981183 19981232 chr3L 19981283 19981328 20 97 5.5 4.5 5.0 3.3 145 chr3L 19981183 intergenic not near genes chr3L 19981256 intergenic CG17732 + chr3L 19981328 intergenic CG17732 + chr3L_20_19980001 chr3L_19980001 RAL-406 1889 chr3L 20063058 20063085 chr3L 20067086 20067113 4 4028 27.0 17.0 22.0 0.2 4055 chr3L 20063058 intron sNPF-R - chr3L 20065086 intron sNPF-R - chr3L 20067113 intron sNPF-R - chr3L_4_20065001 chr3L_20065001 RAL-406 1890 chr3L 20068959 20069006 chr3L 20069172 20069221 9 210 5.0 7.5 6.2 1.2 262 chr3L 20068959 intron sNPF-R - chr3L 20069090 intron sNPF-R - chr3L 20069221 intron sNPF-R - chr3L_9_20065001 chr3L_20065001 RAL-406 1891 chr3L 20086772 20086811 chr3L 20086870 20086907 18 95 7.0 0.5 3.8 3.8 135 chr3L 20086772 intron sNPF-R - chr3L 20086840 intron sNPF-R - chr3L 20086907 intron sNPF-R - chr3L_18_20085001 chr3L_20085001 RAL-406 1892 chr3L 20096066 20096118 chr3L 20096190 20096237 4 102 6.0 0.0 3.0 1.0 171 chr3L 20096066 intergenic not near genes chr3L 20096152 intergenic not near genes chr3L 20096237 intergenic not near genes chr3L_4_20095001 chr3L_20095001 RAL-406 1893 chr3L 20113639 20113691 chr3L 20122916 20122918 roo 17 9272 6.5 8.5 7.5 2.0 9279 chr3L 20113639 intergenic not near genes chr3L 20118278 intergenic not near genes chr3L 20122918 intergenic not near genes chr3L_17_20115001 chr3L_20115001 RAL-406 1894 chr3L 20150710 20150755 chr3L 20150861 20150906 23 147 6.0 6.5 6.2 3.2 196 chr3L 20150710 3` UTR CG42674 - chr3L 20150808 3` UTR CG42674 - chr3L 20150906 3` UTR CG42674 - chr3L_23_20150001 chr3L_20150001 RAL-406 1895 chr3L 20218215 20218227 chr3L 20218351 20218363 9 134 0.0 13.0 6.5 1.2 148 chr3L 20218215 intergenic CG6933 - chr3L 20218289 intergenic CG6933 - chr3L 20218363 intergenic CG6933 - chr3L_9_20215001 chr3L_20215001 RAL-406 1896 chr3L 20257333 20257363 chr3L 20258453 20258503 pogo 12 1133 3.0 7.5 5.2 1.9 1170 chr3L 20257333 intron rdgC + chr3L 20257918 intron rdgC + chr3L 20258503 intron rdgC + chr3L_12_20255001 chr3L_20255001 RAL-406 1897 chr3L 20283660 20283680 chr3L 20283764 20283782 14 101 14.5 5.0 9.8 1.3 122 chr3L 20283660 intron gogo - chr3L 20283721 intron gogo - chr3L 20283782 intron gogo - chr3L_14_20280001 chr3L_20280001 RAL-406 1898 chr3L 20283682 20283704 chr3L 20283760 20283808 9 97 7.0 5.0 6.0 1.3 126 chr3L 20283682 intron gogo - chr3L 20283745 intron gogo - chr3L 20283808 intron gogo - chr3L_9_20280001 chr3L_20280001 RAL-406 1899 chr3L 20426177 20426228 chr3L 20426365 20426406 20 186 5.5 6.0 5.8 2.9 229 chr3L 20426177 intergenic CG5274 -,CG5282 - chr3L 20426292 3` UTR CG5274 - chr3L 20426406 exon CG5274 - chr3L_20_20425001 chr3L_20425001 RAL-406 1900 chr3L 20447679 20447690 chr3L 20447778 20447783 7 97 16.0 2.0 9.0 0.7 104 chr3L 20447679 intron CG5910 + chr3L 20447731 intron CG5910 + chr3L 20447783 intron CG5910 + chr3L_7_20445001 chr3L_20445001 RAL-406 1901 chr3L 20448781 20448798 chr3L 20448899 20448906 7 116 17.5 10.5 14.0 0.5 125 chr3L 20448781 intron CG5910 + chr3L 20448844 intron CG5910 + chr3L 20448906 intron CG5910 + chr3L_7_20445001 chr3L_20445001 RAL-406 1902 chr3L 20448799 20449052 chr3L 20448894 20449139 12 96 4.5 9.5 7.0 1.5 340 chr3L 20448799 intron CG5910 + chr3L 20448969 intron CG5910 + chr3L 20449139 intron CG5910 + chr3L_12_20445001 chr3L_20445001 RAL-406 1903 chr3L 20462568 20462602 chr3L 20462669 20462678 12 96 8.5 0.0 4.2 2.3 110 chr3L 20462568 intron atk - chr3L 20462623 intron atk - chr3L 20462678 intron atk - chr3L_12_20460001 chr3L_20460001 RAL-406 1904 chr3L 20476734 20476782 chr3L 20484353 20484401 springer 19 7617 5.0 5.5 5.2 3.1 7667 chr3L 20476734 3` UTR isoQC + chr3L 20480568 intergenic not near genes chr3L 20484401 3` UTR ZnT77C - chr3L_19_20480001 chr3L_20480001 RAL-406 1905 chr3L 20525228 20525228 chr3L 22908066 22908066 5 2382838 16.5 38.5 27.5 0.2 2382838 chr3L 20525228 intron CG4825 - chr3L 21716647 intergenic not near genes chr3L 22908066 intergenic not near genes chr3L_5_21715001 chr3L_21715001 RAL-406 1906 chr3L 20525228 20525228 chr3L 24821492 24821493 4 4296265 16.5 15.0 15.8 0.2 4296265 chr3L 20525228 intron CG4825 - chr3L 22673360 intron CG14457 + chr3L 24821493 intergenic not near genes chr3L_4_22670001 chr3L_22670001 RAL-406 1907 chr3L 20548355 20548387 chr3L 20548453 20548496 9 104 8.5 6.5 7.5 1.1 141 chr3L 20548355 intergenic not near genes chr3L 20548426 intergenic not near genes chr3L 20548496 intergenic not near genes chr3L_9_20545001 chr3L_20545001 RAL-406 1908 chr3L 20549656 20549696 chr3L 20550169 20550202 9 510 7.0 4.5 5.8 1.3 546 chr3L 20549656 intergenic not near genes chr3L 20549929 intergenic not near genes chr3L 20550202 intergenic not near genes chr3L_9_20545001 chr3L_20545001 RAL-406 1909 chr3L 20710747 20710779 chr3L 20710844 20710876 8 96 7.5 1.5 4.5 1.5 129 chr3L 20710747 intergenic not near genes chr3L 20710812 intergenic not near genes chr3L 20710876 intergenic not near genes chr3L_8_20710001 chr3L_20710001 RAL-406 1910 chr3L 20821281 20821310 chr3L 20824740 20824799 NOF 11 3485 4.0 3.0 3.5 2.4 3518 chr3L 20821281 intron Pka-R1 + chr3L 20823040 intron Pka-R1 + chr3L 20824799 intron Pka-R1 + chr3L_11_20820001 chr3L_20820001 RAL-406 1911 chr3L 20849252 20849297 chr3L 20849351 20849391 25 98 9.0 9.5 9.2 2.5 139 chr3L 20849252 intron CG32432 - chr3L 20849322 intron CG32432 - chr3L 20849391 intron CG32432 - chr3L_25_20845001 chr3L_20845001 RAL-406 1912 chr3L 20858052 20858104 chr3L 20858171 20858223 29 118 8.5 8.5 8.5 3.1 171 chr3L 20858052 intron CG32432 - chr3L 20858138 intron CG32432 - chr3L 20858223 intron CG32432 - chr3L_29_20855001 chr3L_20855001 RAL-406 1913 chr3L 20865452 20865469 chr3L 20865552 20865569 7 98 9.0 7.5 8.2 0.8 117 chr3L 20865452 intron CG32432 - chr3L 20865510 intron CG32432 - chr3L 20865569 intron CG32432 - chr3L_7_20865001 chr3L_20865001 RAL-406 1914 chr3L 20865470 20865490 chr3L 20865550 20865590 8 98 4.5 7.5 6.0 1.1 120 chr3L 20865470 intron CG32432 - chr3L 20865530 intron CG32432 - chr3L 20865590 intron CG32432 - chr3L_8_20865001 chr3L_20865001 RAL-406 1915 chr3L 21010353 21010398 chr3L 21010480 21010521 10 119 6.0 6.5 6.2 1.4 168 chr3L 21010353 intron skd - chr3L 21010437 intron skd - chr3L 21010521 intron skd - chr3L_10_21010001 chr3L_21010001 RAL-406 1916 chr3L 21151845 21151873 chr3L 21156949 21156977 flea 13 5101 8.5 6.5 7.5 1.5 5132 chr3L 21151845 intron Ac78C - chr3L 21154411 intron Ac78C - chr3L 21156977 intron Ac78C - chr3L_13_21150001 chr3L_21150001 RAL-406 1917 chr3L 21151874 21151895 chr3L 21156948 21156999 flea 7 5097 5.0 6.5 5.8 1.0 5125 chr3L 21151874 intron Ac78C - chr3L 21154436 intron Ac78C - chr3L 21156999 intron Ac78C - chr3L_7_21150001 chr3L_21150001 RAL-406 1918 chr3L 21172838 21172873 chr3L 21172961 21172977 11 119 4.0 6.5 5.2 1.8 139 chr3L 21172838 intergenic chb +,asparagine-synthetase + chr3L 21172908 5` UTR chb + chr3L 21172977 5` UTR chb + chr3L_11_21170001 chr3L_21170001 RAL-406 1919 chr3L 21256524 21256557 chr3L 21256638 21256671 4 113 4.5 8.5 6.5 0.5 147 chr3L 21256524 intron Eip78C + chr3L 21256598 intron Eip78C + chr3L 21256671 intron Eip78C + chr3L_4_21255001 chr3L_21255001 RAL-406 1920 chr3L 21306130 21306181 chr3L 21315309 21315339 roo 18 9176 7.0 5.5 6.2 2.5 9209 chr3L 21306130 3` UTR CG7632 + chr3L 21310734 intron Pc - chr3L 21315339 3` UTR Pc - chr3L_18_21310001 chr3L_21310001 RAL-406 1921 chr3L 21319517 21319559 chr3L 21319627 21319663 20 107 2.0 3.5 2.8 5.3 146 chr3L 21319517 5` UTR Rab26 + chr3L 21319590 5` UTR Rab26 + chr3L 21319663 5` UTR Rab26 + chr3L_20_21315001 chr3L_21315001 RAL-406 1922 chr3L 21395143 21395156 chr3L 21395241 21395264 8 103 10.5 6.0 8.2 0.9 121 chr3L 21395143 intron rgn + chr3L 21395204 intron rgn + chr3L 21395264 intron rgn + chr3L_8_21395001 chr3L_21395001 RAL-406 1923 chr3L 21395161 21395176 chr3L 21395238 21395253 6 83 5.0 5.5 5.2 1.0 92 chr3L 21395161 intron rgn + chr3L 21395207 intron rgn + chr3L 21395253 intron rgn + chr3L_6_21395001 chr3L_21395001 RAL-406 1924 chr3L 21415129 21415163 chr3L 21415221 21415246 22 96 5.0 8.5 6.8 2.8 117 chr3L 21415129 intron rgn + chr3L 21415188 intron rgn + chr3L 21415246 intron rgn + chr3L_22_21415001 chr3L_21415001 RAL-406 1925 chr3L 21515854 21515904 chr3L 21515961 21515980 14 103 3.0 5.5 4.2 2.7 126 chr3L 21515854 5` UTR SAK - chr3L 21515917 intergenic SAK -,Cdk12 + chr3L 21515980 intergenic SAK -,Cdk12 + chr3L_14_21515001 chr3L_21515001 RAL-406 1926 chr3L 21540612 21540635 chr3L 21540730 21540771 5 127 4.5 4.5 4.5 0.9 159 chr3L 21540612 3` UTR VhaM9.7-b + chr3L 21540692 3` UTR VhaM9.7-b + chr3L 21540771 3` UTR VhaM9.7-b + chr3L_5_21540001 chr3L_21540001 RAL-406 1927 chr3L 21576160 21576201 chr3L 21576258 21576304 17 101 7.0 13.5 10.2 1.5 144 chr3L 21576160 3` UTR CR43939 - chr3L 21576232 3` UTR CR43939 - chr3L 21576304 3` UTR CR43939 - chr3L_17_21575001 chr3L_21575001 RAL-406 1928 chr3L 21599783 21599809 chr3L 21599912 21599951 6 136 4.0 8.5 6.2 0.8 168 chr3L 21599783 intron TfAP-2 + chr3L 21599867 intron TfAP-2 + chr3L 21599951 intron TfAP-2 + chr3L_6_21595001 chr3L_21595001 RAL-406 1929 chr3L 21671486 21671530 chr3L 21671589 21671633 26 97 4.5 11.0 7.8 3.0 147 chr3L 21671486 intergenic not near genes chr3L 21671560 intergenic not near genes chr3L 21671633 intergenic not near genes chr3L_26_21670001 chr3L_21670001 RAL-406 1930 chr3L 21769034 21769086 chr3L 21769141 21769192 24 104 5.0 4.0 4.5 4.4 158 chr3L 21769034 intron,intron Syn1 -,CG42689 + chr3L 21769113 intron,intron Syn1 -,CG42689 + chr3L 21769192 intron,intron Syn1 -,CG42689 + chr3L_24_21765001 chr3L_21765001 RAL-406 1931 chr3L 21776663 21776694 chr3L 21776770 21776801 11 105 4.0 5.0 4.5 2.0 138 chr3L 21776663 intron,intron CG42689 +,CG42552 + chr3L 21776732 intron,intron CG42689 +,CG42552 + chr3L 21776801 intron,intron CG42689 +,CG42552 + chr3L_11_21775001 chr3L_21775001 RAL-406 1932 chr3L 21836708 21836761 chr3L 21836814 21836847 16 98 5.0 7.5 6.2 2.2 139 chr3L 21836708 3` UTR P5CDh1 - chr3L 21836778 3` UTR P5CDh1 - chr3L 21836847 3` UTR P5CDh1 - chr3L_16_21835001 chr3L_21835001 RAL-406 1933 chr3L 21849499 21849533 chr3L 21849597 21849635 12 99 2.0 12.0 7.0 1.5 136 chr3L 21849499 intron mub + chr3L 21849567 intron mub + chr3L 21849635 intron mub + chr3L_12_21845001 chr3L_21845001 RAL-406 1934 chr3L 21966464 21966504 chr3L 21966566 21966607 5 101 3.0 10.0 6.5 0.7 143 chr3L 21966464 intron CS-2 + chr3L 21966536 intron CS-2 + chr3L 21966607 intron CS-2 + chr3L_5_21965001 chr3L_21965001 RAL-406 1935 chr3L 21972565 21972596 chr3L 21972725 21972774 13 171 6.0 3.5 4.8 2.2 209 chr3L 21972565 intron CG7470 + chr3L 21972670 intron CG7470 + chr3L 21972774 intron CG7470 + chr3L_13_21970001 chr3L_21970001 RAL-406 1936 chr3L 22092798 22092816 chr3L 22092918 22092937 14 117 8.0 4.5 6.2 1.9 139 chr3L 22092798 intergenic not near genes chr3L 22092868 intergenic not near genes chr3L 22092937 intergenic not near genes chr3L_14_22090001 chr3L_22090001 RAL-406 1937 chr3L 22099657 22099673 chr3L 22105863 22105879 3S18 7 6205 12.5 7.0 9.8 0.6 6222 chr3L 22099657 intergenic not near genes chr3L 22102768 intergenic not near genes chr3L 22105879 intergenic not near genes chr3L_7_22100001 chr3L_22100001 RAL-406 1938 chr3L 22099675 22099706 chr3L 22105860 22105912 3S18 11 6203 7.5 6.5 7.0 1.4 6237 chr3L 22099675 intergenic not near genes chr3L 22102794 intergenic not near genes chr3L 22105912 intergenic not near genes chr3L_11_22100001 chr3L_22100001 RAL-406 1939 chr3L 22134259 22134300 chr3L 22134366 22134377 28 108 1.0 4.5 2.8 7.4 118 chr3L 22134259 intergenic not near genes chr3L 22134318 intergenic not near genes chr3L 22134377 intergenic not near genes chr3L_28_22130001 chr3L_22130001 RAL-406 1940 chr3L 22200846 22200880 chr3L 22200953 22200987 5 107 10.5 4.5 7.5 0.6 141 chr3L 22200846 intron olf413 + chr3L 22200916 intron olf413 + chr3L 22200987 intron olf413 + chr3L_5_22200001 chr3L_22200001 RAL-406 1941 chr3L 22200890 22200896 chr3L 22200947 22201003 7 97 6.0 2.5 4.2 1.3 113 chr3L 22200890 intron olf413 + chr3L 22200946 intron olf413 + chr3L 22201003 intron olf413 + chr3L_7_22200001 chr3L_22200001 RAL-406 1942 chr3L 22275610 22275632 chr3L 22275706 22275738 9 99 6.0 8.5 7.2 1.1 128 chr3L 22275610 intron srpk79D + chr3L 22275674 intron srpk79D + chr3L 22275738 intron srpk79D + chr3L_9_22275001 chr3L_22275001 RAL-406 1943 chr3L 22447185 22447202 chr3L 22447286 22447313 10 110 7.5 4.5 6.0 1.4 128 chr3L 22447185 intergenic not near genes chr3L 22447249 intergenic not near genes chr3L 22447313 intergenic not near genes chr3L_10_22445001 chr3L_22445001 RAL-406 1944 chr3L 22447204 22447231 chr3L 22447285 22447342 15 102 5.5 4.5 5.0 2.5 138 chr3L 22447204 intergenic not near genes chr3L 22447273 intergenic not near genes chr3L 22447342 intergenic not near genes chr3L_15_22445001 chr3L_22445001 RAL-406 1945 chr3L 22477035 22477085 chr3L 22477146 22477196 7 102 0.5 5.5 3.0 1.8 161 chr3L 22477035 intergenic not near genes chr3L 22477116 intergenic not near genes chr3L 22477196 intergenic not near genes chr3L_7_22475001 chr3L_22475001 RAL-406 1946 chr3L 22512996 22513037 chr3L 22513103 22513143 16 103 4.5 10.0 7.2 2.0 147 chr3L 22512996 intergenic not near genes chr3L 22513070 intergenic not near genes chr3L 22513143 intergenic not near genes chr3L_16_22510001 chr3L_22510001 RAL-406 1947 chr3L 22555759 22555786 chr3L 22563243 22563276 blood 8 7485 10.0 2.0 6.0 1.1 7517 chr3L 22555759 intergenic not near genes chr3L 22559518 intergenic not near genes chr3L 22563276 intergenic not near genes chr3L_8_22555001 chr3L_22555001 RAL-406 1948 chr3L 22577628 22577650 chr3L 22582410 22582428 Doc 9 4788 1.0 4.5 2.8 2.4 4800 chr3L 22577628 intergenic not near genes chr3L 22580028 intergenic not near genes chr3L 22582428 3` UTR CG14459 - chr3L_9_22580001 chr3L_22580001 RAL-406 1949 chr3L 22603905 22603949 chr3L 22603996 22604030 8 93 3.5 3.5 3.5 1.8 125 chr3L 22603905 intron CG14459 - chr3L 22603968 intron CG14459 - chr3L 22604030 intron CG14459 - chr3L_8_22600001 chr3L_22600001 RAL-406 1950 chr3L 22617181 22617215 chr3L 22624640 22624678 blood 13 7466 5.0 1.5 3.2 3.1 7497 chr3L 22617181 intron CG14459 - chr3L 22620930 intron CG14459 - chr3L 22624678 intron CG14459 - chr3L_13_22620001 chr3L_22620001 RAL-406 1951 chr3L 22674413 22674420 chr3L 22674511 22674518 8 98 18.0 3.0 10.5 0.7 105 chr3L 22674413 intron CG14457 + chr3L 22674466 intron CG14457 + chr3L 22674518 intron CG14457 + chr3L_8_22670001 chr3L_22670001 RAL-406 1952 chr3L 22674422 22674448 chr3L 22674509 22674546 12 92 10.0 3.5 6.8 1.5 124 chr3L 22674422 intron CG14457 + chr3L 22674484 intron CG14457 + chr3L 22674546 intron CG14457 + chr3L_12_22670001 chr3L_22670001 RAL-406 1953 chr3L 22761368 22761378 chr3L 22766822 22766827 Ivk 8 5453 17.0 6.0 11.5 0.6 5459 chr3L 22761368 intron SPoCk + chr3L 22764098 intron SPoCk + chr3L 22766827 intron SPoCk + chr3L_8_22760001 chr3L_22760001 RAL-406 1954 chr3L 22761380 22761421 chr3L 22766819 22766847 Ivk 17 5448 8.0 5.5 6.8 2.2 5467 chr3L 22761380 intron SPoCk + chr3L 22764114 intron SPoCk + chr3L 22766847 intron SPoCk + chr3L_17_22760001 chr3L_22760001 RAL-406 1955 chr3L 22865969 22866006 chr3L 22867121 22867153 Doc 19 1149 9.5 6.0 7.8 2.2 1184 chr3L 22865969 intron CG33170 + chr3L 22866561 intron CG33170 + chr3L 22867153 intron CG33170 + chr3L_19_22865001 chr3L_22865001 RAL-406 1956 chr3L 22897184 22897225 chr3L 22897287 22897328 12 101 3.5 3.5 3.5 2.7 144 chr3L 22897184 intergenic not near genes chr3L 22897256 intergenic not near genes chr3L 22897328 intergenic not near genes chr3L_12_22895001 chr3L_22895001 RAL-406 1957 chr3L 19220633 19220635 chr3L 22908066 22908066 7 3687432 14.5 38.5 26.5 0.3 3687433 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_7_21060001 chr3L_21060001 RAL-406 1958 chr3L 20525229 20525229 chr3L 22908066 22908066 6 2382837 16.5 38.5 27.5 0.2 2382837 chr3L 20525229 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908066 intergenic not near genes chr3L_6_21715001 chr3L_21715001 RAL-406 1959 chr3L 22908066 22908066 chr3L 24821491 24821494 21 1913427 39.5 15.5 27.5 0.7 1913428 chr3L 22908066 intergenic not near genes chr3L 23864780 intron CG40470 - chr3L 24821494 intergenic not near genes chr3L_21_23860001 chr3L_23860001 RAL-406 1960 chr3L 19220633 19220636 chr3L 22908067 22908067 8 3687432 15.0 38.5 26.8 0.3 3687434 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_8_21060001 chr3L_21060001 RAL-406 1961 chr3L 20525228 20525230 chr3L 22908067 22908067 6 2382838 16.5 38.5 27.5 0.2 2382839 chr3L 20525228 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_6_21715001 chr3L_21715001 RAL-406 1962 chr3L 22908067 22908068 chr3L 24821491 24821494 14 1913426 40.0 15.5 27.8 0.5 1913427 chr3L 22908067 intergenic not near genes chr3L 23864780 intron CG40470 - chr3L 24821494 intergenic not near genes chr3L_14_23860001 chr3L_23860001 RAL-406 1963 chr3L 22980566 22980599 chr3L 22980660 22980699 9 99 2.5 3.5 3.0 2.2 133 chr3L 22980566 intergenic not near genes chr3L 22980632 intergenic not near genes chr3L 22980699 intergenic not near genes chr3L_9_22980001 chr3L_22980001 RAL-406 1964 chr3L 22985296 22985305 chr3L 22985399 22985408 5 102 8.5 6.5 7.5 0.6 112 chr3L 22985296 intergenic not near genes chr3L 22985352 intergenic not near genes chr3L 22985408 intergenic not near genes chr3L_5_22985001 chr3L_22985001 RAL-406 1965 chr3L 22985309 22985333 chr3L 22985383 22985436 16 95 4.0 4.5 4.2 3.1 127 chr3L 22985309 intergenic not near genes chr3L 22985372 intergenic not near genes chr3L 22985436 intergenic not near genes chr3L_16_22985001 chr3L_22985001 RAL-406 1966 chr3L 22989862 22989876 chr3L 22996839 22996868 297 5 6985 2.0 5.0 3.5 1.1 7006 chr3L 22989862 intergenic not near genes chr3L 22993365 intergenic not near genes chr3L 22996868 intergenic not near genes chr3L_5_22990001 chr3L_22990001 RAL-406 1967 chr3L 22989878 22989894 chr3L 22996837 22996888 297 6 6982 2.0 5.0 3.5 1.3 7010 chr3L 22989878 intergenic not near genes chr3L 22993383 intergenic not near genes chr3L 22996888 intergenic not near genes chr3L_6_22990001 chr3L_22990001 RAL-406 1968 chr3L 23101262 23101311 chr3L 23101493 23101532 13 226 3.5 0.0 1.8 4.6 270 chr3L 23101262 intron CkIIalpha + chr3L 23101397 intron CkIIalpha + chr3L 23101532 intron CkIIalpha + chr3L_13_23100001 chr3L_23100001 RAL-406 1969 chr3L 23182258 23182283 chr3L 23182374 23182382 8 125 5.5 5.5 5.5 1.2 124 chr3L 23182258 intron CG34031 + chr3L 23182320 intron CG34031 + chr3L 23182382 intron CG34031 + chr3L_8_23180001 chr3L_23180001 RAL-406 1970 chr3L 23319640 23319676 chr3L 23319751 23319787 11 106 7.5 6.5 7.0 1.4 147 chr3L 23319640 intron alpha-Cat - chr3L 23319714 intron alpha-Cat - chr3L 23319787 intron alpha-Cat - chr3L_11_23315001 chr3L_23315001 RAL-406 1971 chr3L 23401263 23401306 chr3L 23401667 23401710 17 401 6.5 2.5 4.5 3.1 447 chr3L 23401263 intergenic not near genes chr3L 23401486 intergenic not near genes chr3L 23401710 intergenic not near genes chr3L_17_23400001 chr3L_23400001 RAL-406 1972 chr3L 23824024 23824032 chr3L 23824457 23824465 6 432 3.0 7.5 5.2 1.0 441 chr3L 23824024 intergenic not near genes chr3L 23824244 intergenic not near genes chr3L 23824465 intergenic not near genes chr3L_6_23820001 chr3L_23820001 RAL-406 1973 chr3L 23875535 23875555 chr3L 23875619 23875630 4 83 3.5 4.5 4.0 0.8 95 chr3L 23875535 intron CG40470 - chr3L 23875582 intron CG40470 - chr3L 23875630 intron CG40470 - chr3L_4_23875001 chr3L_23875001 RAL-406 1974 chr3L 24012417 24012439 chr3L 24020749 24020769 roo 10 8348 3.5 5.5 4.5 1.8 8352 chr3L 24012417 intergenic not near genes chr3L 24016593 intergenic not near genes chr3L 24020769 intergenic not near genes chr3L_10_24015001 chr3L_24015001 RAL-406 1975 chr3L 24324284 24324311 chr3L 24324398 24324425 5 109 2.0 4.0 3.0 1.2 141 chr3L 24324284 intergenic not near genes chr3L 24324354 intergenic not near genes chr3L 24324425 intergenic nvd + chr3L_5_24320001 chr3L_24320001 RAL-406 1976 chr3L 24791878 24791907 chr3L 24796677 24796706 Doc 4 4794 5.5 2.0 3.8 0.8 4828 chr3L 24791878 intergenic not near genes chr3L 24794292 intergenic not near genes chr3L 24796706 intergenic not near genes chr3L_4_24790001 chr3L_24790001 RAL-406 1977 chr3L 18198930 18198931 chr3L 24821492 24821492 9 6622562 0.0 15.0 7.5 1.1 6622562 chr3L 18198930 intergenic not near genes chr3L 21510211 intron M6 + chr3L 24821492 intergenic not near genes chr3L_9_21510001 chr3L_21510001 RAL-406 1978 chr3L 20525228 20525230 chr3L 24821492 24821492 9 4296263 16.5 15.0 15.8 0.5 4296264 chr3L 20525228 intron CG4825 - chr3L 22673360 intron CG14457 + chr3L 24821492 intergenic not near genes chr3L_9_22670001 chr3L_22670001 RAL-406 1979 chr3L 18198930 18198931 chr3L 24821493 24821493 7 6622562 0.0 15.0 7.5 0.8 6622563 chr3L 18198930 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821493 intergenic not near genes chr3L_7_21510001 chr3L_21510001 RAL-406 1980 chr3L 20525229 20525230 chr3L 24821493 24821493 4 4296263 16.5 15.0 15.8 0.2 4296264 chr3L 20525229 intron CG4825 - chr3L 22673361 intron CG14457 + chr3L 24821493 intergenic not near genes chr3L_4_22670001 chr3L_22670001 RAL-406 1981 chr3L 18198929 18198931 chr3L 24821494 24821494 6 6622564 0.0 15.0 7.5 0.7 6622565 chr3L 18198929 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821494 intergenic not near genes chr3L_6_21510001 chr3L_21510001 RAL-406 1982 chr3L 23289000 23289044 chr3L 25843661 25843705 12 2554666 40.5 38.0 39.2 0.3 2554705 chr3L 23289000 intergenic not near genes chr3L 24566352 intergenic not near genes chr3L 25843705 intron CG40178 - chr3L_12_24565001 chr3L_24565001 RAL-406 1983 chr3L 26008743 26008799 chr3L 26008910 26008956 15 156 5.0 4.5 4.8 2.6 213 chr3L 26008743 intron CG40178 - chr3L 26008850 intron CG40178 - chr3L 26008956 intron CG40178 - chr3L_15_26005001 chr3L_26005001 RAL-406 1984 chr3L 27347483 27347497 chr3L 27347579 27347603 9 102 2.5 6.5 4.5 1.6 120 chr3L 27347483 intron Dbp80 + chr3L 27347543 intron Dbp80 + chr3L 27347603 intron Dbp80 + chr3L_9_27345001 chr3L_27345001 RAL-406 1985 chr3R 97110 97111 chr3R 99846 99847 4 2736 12.0 15.0 13.5 0.3 2737 chr3R 97110 intergenic not near genes chr3R 98478 intergenic not near genes chr3R 99847 intergenic not near genes chr3R_4_95001 chr3R_95001 RAL-406 1986 chr3R 2424350 2424361 chr3R 5442443 5442454 Circe 4 3018093 13.5 11.0 12.2 0.3 3018104 chr3R 2424350 intergenic not near genes chr3R 3933402 intergenic not near genes chr3R 5442454 intron CG14669 + chr3R_4_3930001 chr3R_3930001 RAL-406 1987 chr3R 2534151 2534163 chr3R 2541700 2541722 5 7570 6.5 14.5 10.5 0.4 7571 chr3R 2534151 intergenic not near genes chr3R 2537936 intergenic not near genes chr3R 2541722 intergenic not near genes chr3R_5_2535001 chr3R_2535001 RAL-406 1988 chr3R 2998456 2998470 chr3R 2998542 2998562 6 94 9.0 3.5 6.2 0.8 106 chr3R 2998456 intron CG42618 - chr3R 2998509 intron CG42618 - chr3R 2998562 intron CG42618 - chr3R_6_2995001 chr3R_2995001 RAL-406 1989 chr3R 2998471 2998493 chr3R 2998538 2998589 7 83 5.0 3.5 4.2 1.3 118 chr3R 2998471 intron CG42618 - chr3R 2998530 intron CG42618 - chr3R 2998589 intron CG42618 - chr3R_7_2995001 chr3R_2995001 RAL-406 1990 chr3R 3916188 3916204 chr3R 3916315 3916330 5 127 32.5 24.5 28.5 0.2 142 chr3R 3916188 intergenic not near genes chr3R 3916259 intergenic not near genes chr3R 3916330 intergenic not near genes chr3R_5_3915001 chr3R_3915001 RAL-406 1991 chr3R 4105022 4105038 chr3R 4110246 4110262 copia 5 5223 10.5 3.0 6.8 0.6 5240 chr3R 4105022 intergenic not near genes chr3R 4107642 intergenic not near genes chr3R 4110262 intergenic not near genes chr3R_5_4105001 chr3R_4105001 RAL-406 1992 chr3R 4105047 4105059 chr3R 4110244 4110283 copia 4 5217 7.5 3.0 5.2 0.6 5236 chr3R 4105047 intergenic not near genes chr3R 4107665 intergenic not near genes chr3R 4110283 intergenic not near genes chr3R_4_4105001 chr3R_4105001 RAL-406 1993 chr3R 4132880 4132929 chr3R 4133054 4133098 17 172 2.5 3.0 2.8 4.5 218 chr3R 4132880 intron Gfat1 + chr3R 4132989 intron Gfat1 + chr3R 4133098 intron Gfat1 + chr3R_17_4130001 chr3R_4130001 RAL-406 1994 chr3R 4206051 4206100 chr3R 4211646 4211695 mdg3 19 5591 5.5 4.0 4.8 3.3 5644 chr3R 4206051 intron CG14636 - chr3R 4208873 intron CG14636 - chr3R 4211695 intron CG14636 - chr3R_19_4205001 chr3R_4205001 RAL-406 1995 chr3R 4366741 4366765 chr3R 4375144 4375168 roo 5 8403 10.0 3.5 6.8 0.6 8427 chr3R 4366741 3` UTR CG1090 + chr3R 4370954 intergenic not near genes chr3R 4375168 5` UTR CR44922 + chr3R_5_4370001 chr3R_4370001 RAL-406 1996 chr3R 4366768 4366773 chr3R 4375140 4375176 roo 5 8391 9.0 3.5 6.2 0.7 8408 chr3R 4366768 3` UTR CG1090 + chr3R 4370972 intergenic not near genes chr3R 4375176 5` UTR CR44922 + chr3R_5_4370001 chr3R_4370001 RAL-406 1997 chr3R 4366776 4366791 chr3R 4375138 4375185 roo 5 8389 3.0 3.0 3.0 1.2 8409 chr3R 4366776 3` UTR CG1090 + chr3R 4370980 intergenic not near genes chr3R 4375185 5` UTR CR44922 + chr3R_5_4370001 chr3R_4370001 RAL-406 1998 chr3R 4408394 4408400 chr3R 4412718 4412723 Juan 4 4324 15.5 8.5 12.0 0.3 4329 chr3R 4408394 intron CG32944 - chr3R 4410558 intron CG32944 - chr3R 4412723 intron CG32944 - chr3R_4_4410001 chr3R_4410001 RAL-406 1999 chr3R 4408401 4408414 chr3R 4412715 4412731 Juan 6 4319 15.0 8.5 11.8 0.5 4330 chr3R 4408401 intron CG32944 - chr3R 4410566 intron CG32944 - chr3R 4412731 intron CG32944 - chr3R_6_4410001 chr3R_4410001 RAL-406 2000 chr3R 4408416 4408425 chr3R 4412714 4412749 Juan 8 4316 11.0 8.5 9.8 0.7 4333 chr3R 4408416 intron CG32944 - chr3R 4410582 intron CG32944 - chr3R 4412749 intron CG32944 - chr3R_8_4410001 chr3R_4410001 RAL-406 2001 chr3R 4408426 4408433 chr3R 4412710 4412757 Juan 8 4310 10.0 7.0 8.5 0.8 4331 chr3R 4408426 intron CG32944 - chr3R 4410592 intron CG32944 - chr3R 4412757 intron CG32944 - chr3R_8_4410001 chr3R_4410001 RAL-406 2002 chr3R 4463388 4463421 chr3R 4463474 4463517 26 93 4.5 4.5 4.5 4.7 129 chr3R 4463388 intergenic not near genes chr3R 4463452 intergenic not near genes chr3R 4463517 intergenic not near genes chr3R_26_4460001 chr3R_4460001 RAL-406 2003 chr3R 4470967 4471018 chr3R 4471066 4471112 13 91 3.5 4.5 4.0 2.6 145 chr3R 4470967 intron CG31523 - chr3R 4471040 intron CG31523 - chr3R 4471112 intron CG31523 - chr3R_13_4470001 chr3R_4470001 RAL-406 2004 chr3R 4753224 4753246 chr3R 4757547 4757568 F-element 8 4323 8.0 2.5 5.2 1.3 4344 chr3R 4753224 intron,intron atms +,CG44098 - chr3R 4755396 intron,intron atms +,CG44098 - chr3R 4757568 intron,exon atms +,CG44098 - chr3R_8_4755001 chr3R_4755001 RAL-406 2005 chr3R 4764454 4764488 chr3R 4764697 4764741 18 250 6.5 5.0 5.8 2.6 287 chr3R 4764454 intron,intron atms +,CG44098 - chr3R 4764598 intron,intron atms +,CG44098 - chr3R 4764741 intron,intron atms +,CG44098 - chr3R_18_4760001 chr3R_4760001 RAL-406 2006 chr3R 4769141 4769190 chr3R 4769238 4769288 21 94 2.0 3.0 2.5 6.0 147 chr3R 4769141 intron,intron atms +,CG44098 - chr3R 4769214 intron,intron atms +,CG44098 - chr3R 4769288 intron,intron atms +,CG44098 - chr3R_21_4765001 chr3R_4765001 RAL-406 2007 chr3R 4896272 4896324 chr3R 4896385 4896437 23 111 7.5 7.5 7.5 2.7 165 chr3R 4896272 intergenic CR45580 + chr3R 4896354 intergenic CR45580 + chr3R 4896437 5` UTR CR45580 + chr3R_23_4895001 chr3R_4895001 RAL-406 2008 chr3R 4948363 4948386 chr3R 4949005 4949028 7 641 36.5 30.0 33.2 0.2 665 chr3R 4948363 intergenic snRNA:U1:82Eb -,UbcD6 - chr3R 4948696 intergenic UbcD6 - chr3R 4949028 3` UTR UbcD6 - chr3R_7_4945001 chr3R_4945001 RAL-406 2009 chr3R 4965993 4966037 chr3R 4966105 4966149 17 111 5.5 5.0 5.2 2.7 156 chr3R 4965993 intron CG1124 + chr3R 4966071 intron CG1124 + chr3R 4966149 intron CG1124 + chr3R_17_4965001 chr3R_4965001 RAL-406 2010 chr3R 4968887 4968938 chr3R 4969212 4969258 14 322 4.5 4.0 4.2 2.7 371 chr3R 4968887 intergenic CG1124 + chr3R 4969072 intergenic not near genes chr3R 4969258 intergenic not near genes chr3R_14_4965001 chr3R_4965001 RAL-406 2011 chr3R 5045826 5045878 chr3R 5052948 5053000 HMS-Beagle 28 7120 4.5 7.0 5.8 4.1 7174 chr3R 5045826 3` UTR CR43635 - chr3R 5049413 intergenic not near genes chr3R 5053000 intergenic CR45588 - chr3R_28_5045001 chr3R_5045001 RAL-406 2012 chr3R 5067966 5068013 chr3R 5073497 5073534 mdg3 17 5534 7.0 6.5 6.8 2.2 5568 chr3R 5067966 intergenic not near genes chr3R 5070750 intergenic not near genes chr3R 5073534 intergenic not near genes chr3R_17_5070001 chr3R_5070001 RAL-406 2013 chr3R 5094545 5094564 chr3R 5094694 5094713 7 151 1.5 1.5 1.5 2.8 168 chr3R 5094545 intergenic not near genes chr3R 5094629 intergenic not near genes chr3R 5094713 intergenic not near genes chr3R_7_5090001 chr3R_5090001 RAL-406 2014 chr3R 5115008 5115036 chr3R 5115105 5115150 8 107 3.0 2.5 2.8 2.1 142 chr3R 5115008 intergenic not near genes chr3R 5115079 intergenic not near genes chr3R 5115150 intergenic not near genes chr3R_8_5115001 chr3R_5115001 RAL-406 2015 chr3R 5142280 5142320 chr3R 5142383 5142418 12 101 6.5 8.0 7.2 1.5 138 chr3R 5142280 intergenic not near genes chr3R 5142349 intergenic not near genes chr3R 5142418 intergenic not near genes chr3R_12_5140001 chr3R_5140001 RAL-406 2016 chr3R 5278075 5278121 chr3R 5278168 5278217 17 93 5.0 6.0 5.5 2.6 142 chr3R 5278075 intron mtd - chr3R 5278146 intron mtd - chr3R 5278217 intron mtd - chr3R_17_5275001 chr3R_5275001 RAL-406 2017 chr3R 5306130 5306130 chr3R 5306216 5306237 4 93 8.0 4.5 6.2 0.6 107 chr3R 5306130 intron mtd - chr3R 5306184 intron mtd - chr3R 5306237 intron mtd - chr3R_4_5305001 chr3R_5305001 RAL-406 2018 chr3R 5306142 5306161 chr3R 5306213 5306240 7 82 5.0 4.0 4.5 1.3 98 chr3R 5306142 intron mtd - chr3R 5306191 intron mtd - chr3R 5306240 intron mtd - chr3R_7_5305001 chr3R_5305001 RAL-406 2019 chr3R 5338380 5338427 chr3R 5343577 5343624 Rt1c 12 5196 9.5 3.5 6.5 1.6 5244 chr3R 5338380 intron mtd - chr3R 5341002 intron mtd - chr3R 5343624 intron mtd - chr3R_12_5340001 chr3R_5340001 RAL-406 2020 chr3R 5385964 5386003 chr3R 5386144 5386184 15 182 0.5 3.5 2.0 5.0 220 chr3R 5385964 intron kkv - chr3R 5386074 intron kkv - chr3R 5386184 intron kkv - chr3R_15_5385001 chr3R_5385001 RAL-406 2021 chr3R 5445942 5445981 chr3R 5452422 5452461 Burdock 19 6476 10.0 6.0 8.0 2.1 6519 chr3R 5445942 intron CG14669 + chr3R 5449202 intron CG14669 + chr3R 5452461 intron CG14669 + chr3R_19_5445001 chr3R_5445001 RAL-406 2022 chr3R 5506826 5506869 chr3R 5506978 5507021 8 148 3.0 5.5 4.2 1.5 195 chr3R 5506826 intergenic not near genes chr3R 5506924 intergenic not near genes chr3R 5507021 intergenic not near genes chr3R_8_5505001 chr3R_5505001 RAL-406 2023 chr3R 5681910 5681935 chr3R 5681991 5682006 11 91 4.5 12.5 8.5 1.2 96 chr3R 5681910 exon Rab23 - chr3R 5681958 intron Rab23 - chr3R 5682006 intron Rab23 - chr3R_11_5680001 chr3R_5680001 RAL-406 2024 chr3R 5726073 5726078 chr3R 5726255 5726259 5 182 22.5 7.5 15.0 0.3 186 chr3R 5726073 intergenic not near genes chr3R 5726166 intergenic not near genes chr3R 5726259 intergenic not near genes chr3R_5_5725001 chr3R_5725001 RAL-406 2025 chr3R 5726080 5726121 chr3R 5726251 5726303 28 179 8.5 6.0 7.2 3.4 223 chr3R 5726080 intergenic not near genes chr3R 5726192 intergenic not near genes chr3R 5726303 intergenic not near genes chr3R_28_5725001 chr3R_5725001 RAL-406 2026 chr3R 5746007 5746041 chr3R 5746257 5746302 pogo 13 258 4.0 5.5 4.8 2.2 295 chr3R 5746007 3` UTR Madm + chr3R 5746154 3` UTR Madm + chr3R 5746302 3` UTR Madm + chr3R_13_5745001 chr3R_5745001 RAL-406 2027 chr3R 5746996 5747032 chr3R 5753207 5753241 diver 19 6208 11.0 7.0 9.0 1.9 6245 chr3R 5746996 intergenic Madm + chr3R 5750118 intergenic not near genes chr3R 5753241 intergenic CG2091 - chr3R_19_5750001 chr3R_5750001 RAL-406 2028 chr3R 5747033 5747044 chr3R 5753203 5753250 diver 7 6202 7.5 6.0 6.8 0.9 6217 chr3R 5747033 intergenic Madm + chr3R 5750142 intergenic not near genes chr3R 5753250 intergenic CG2091 - chr3R_7_5750001 chr3R_5750001 RAL-406 2029 chr3R 5772356 5772409 chr3R 5772534 5772587 28 176 7.5 5.0 6.2 3.9 231 chr3R 5772356 intron CG2082 - chr3R 5772472 intron CG2082 - chr3R 5772587 intron CG2082 - chr3R_28_5770001 chr3R_5770001 RAL-406 2030 chr3R 5809099 5809142 chr3R 5809360 5809403 pogo 10 258 3.5 8.5 6.0 1.4 304 chr3R 5809099 3` UTR CG11000 + chr3R 5809251 3` UTR CG11000 + chr3R 5809403 3` UTR CG11000 + chr3R_10_5805001 chr3R_5805001 RAL-406 2031 chr3R 5895948 5895972 chr3R 5896179 5896189 4 229 0.0 7.0 3.5 0.9 241 chr3R 5895948 intron CG34113 - chr3R 5896068 intron CG34113 - chr3R 5896189 intron CG34113 - chr3R_4_5895001 chr3R_5895001 RAL-406 2032 chr3R 5895973 5895988 chr3R 5896176 5896222 14 228 0.0 7.0 3.5 3.1 249 chr3R 5895973 intron CG34113 - chr3R 5896098 intron CG34113 - chr3R 5896222 intron CG34113 - chr3R_14_5895001 chr3R_5895001 RAL-406 2033 chr3R 5896991 5896999 chr3R 5897334 5897372 5 371 3.0 7.5 5.2 0.8 381 chr3R 5896991 intron CG34113 - chr3R 5897182 intron CG34113 - chr3R 5897372 intron CG34113 - chr3R_5_5895001 chr3R_5895001 RAL-406 2034 chr3R 5927558 5927585 chr3R 5927803 5927805 pogo 14 250 4.5 7.5 6.0 2.0 247 chr3R 5927558 intron CG34113 - chr3R 5927682 intron CG34113 - chr3R 5927805 intron CG34113 - chr3R_14_5925001 chr3R_5925001 RAL-406 2035 chr3R 5943393 5943414 chr3R 5943492 5943513 7 98 4.0 10.5 7.2 0.9 120 chr3R 5943393 intron CG34113 - chr3R 5943453 intron CG34113 - chr3R 5943513 intron CG34113 - chr3R_7_5940001 chr3R_5940001 RAL-406 2036 chr3R 5947944 5947992 chr3R 5948059 5948081 9 104 3.0 1.5 2.2 2.8 137 chr3R 5947944 intron CG34113 - chr3R 5948012 intron CG34113 - chr3R 5948081 intron CG34113 - chr3R_9_5945001 chr3R_5945001 RAL-406 2037 chr3R 6015568 6015580 chr3R 6015665 6015677 6 97 1.0 10.5 5.8 0.9 109 chr3R 6015568 intergenic not near genes chr3R 6015622 intergenic not near genes chr3R 6015677 intergenic not near genes chr3R_6_6015001 chr3R_6015001 RAL-406 2038 chr3R 6110427 6110476 chr3R 6110631 6110645 21 200 1.5 3.0 2.2 6.6 218 chr3R 6110427 exon Obp83ef - chr3R 6110536 intron Obp83ef - chr3R 6110645 intron Obp83ef - chr3R_21_6110001 chr3R_6110001 RAL-406 2039 chr3R 6119109 6119114 chr3R 6119215 6119220 4 106 8.0 4.0 6.0 0.6 111 chr3R 6119109 intergenic not near genes chr3R 6119164 intergenic not near genes chr3R 6119220 intergenic not near genes chr3R_4_6115001 chr3R_6115001 RAL-406 2040 chr3R 6119115 6119156 chr3R 6119211 6119262 21 104 5.0 4.0 4.5 3.8 147 chr3R 6119115 intergenic not near genes chr3R 6119188 intergenic not near genes chr3R 6119262 intergenic not near genes chr3R_21_6115001 chr3R_6115001 RAL-406 2041 chr3R 6121171 6121183 chr3R 6121374 6121421 BS 6 232 0.0 6.0 3.0 1.5 250 chr3R 6121171 intergenic not near genes chr3R 6121296 intergenic not near genes chr3R 6121421 intergenic not near genes chr3R_6_6120001 chr3R_6120001 RAL-406 2042 chr3R 6158531 6158538 chr3R 6167092 6167094 Tirant 4 8568 4.5 5.0 4.8 0.7 8563 chr3R 6158531 intergenic not near genes chr3R 6162812 intergenic not near genes chr3R 6167094 intergenic CG1077 + chr3R_4_6160001 chr3R_6160001 RAL-406 2043 chr3R 6171141 6171175 chr3R 6171508 6171545 12 378 4.0 3.5 3.8 2.5 404 chr3R 6171141 intergenic not near genes chr3R 6171343 intergenic not near genes chr3R 6171545 intergenic not near genes chr3R_12_6170001 chr3R_6170001 RAL-406 2044 chr3R 6175151 6175207 chr3R 6182443 6182470 HMS-Beagle2 20 7285 5.5 4.0 4.8 3.4 7319 chr3R 6175151 intergenic Osi1 + chr3R 6178810 intron CR45194 + chr3R 6182470 intergenic CR45194 + chr3R_20_6175001 chr3R_6175001 RAL-406 2045 chr3R 6226608 6226645 chr3R 6226709 6226752 13 106 9.0 5.0 7.0 1.6 144 chr3R 6226608 intergenic not near genes chr3R 6226680 intergenic not near genes chr3R 6226752 intergenic not near genes chr3R_13_6225001 chr3R_6225001 RAL-406 2046 chr3R 6334776 6334812 chr3R 6334889 6334909 16 115 2.0 7.0 4.5 2.9 133 chr3R 6334776 intergenic not near genes chr3R 6334842 intergenic not near genes chr3R 6334909 intergenic Osi19 + chr3R_16_6330001 chr3R_6330001 RAL-406 2047 chr3R 6510006 6510053 chr3R 6515107 6515143 jockey 23 5098 8.0 7.0 7.5 2.7 5137 chr3R 6510006 intergenic not near genes chr3R 6512574 intergenic not near genes chr3R 6515143 intergenic not near genes chr3R_23_6510001 chr3R_6510001 RAL-406 2048 chr3R 6604635 6604689 chr3R 6604734 6604753 13 91 1.5 1.5 1.5 5.2 118 chr3R 6604635 intergenic not near genes chr3R 6604694 intergenic not near genes chr3R 6604753 intergenic not near genes chr3R_13_6600001 chr3R_6600001 RAL-406 2049 chr3R 6609058 6609106 chr3R 6609295 6609338 14 234 6.5 3.0 4.8 2.4 280 chr3R 6609058 intergenic glob2 - chr3R 6609198 intergenic glob2 - chr3R 6609338 intergenic glob2 - chr3R_14_6605001 chr3R_6605001 RAL-406 2050 chr3R 6697295 6697312 chr3R 6697401 6697416 9 105 10.5 4.5 7.5 1.1 121 chr3R 6697295 intergenic not near genes chr3R 6697356 intergenic not near genes chr3R 6697416 intergenic not near genes chr3R_9_6695001 chr3R_6695001 RAL-406 2051 chr3R 6705667 6705715 chr3R 6705911 6705959 14 241 2.5 6.0 4.2 2.7 292 chr3R 6705667 intergenic not near genes chr3R 6705813 intergenic not near genes chr3R 6705959 intergenic not near genes chr3R_14_6705001 chr3R_6705001 RAL-406 2052 chr3R 6737499 6737527 chr3R 6739286 6739303 Doc 11 1797 3.0 2.5 2.8 2.9 1804 chr3R 6737499 intron pb - chr3R 6738401 intron pb - chr3R 6739303 intron pb - chr3R_11_6735001 chr3R_6735001 RAL-406 2053 chr3R 6862201 6862252 chr3R 6862308 6862359 19 100 7.0 8.0 7.5 2.2 158 chr3R 6862201 intergenic not near genes chr3R 6862280 intergenic not near genes chr3R 6862359 intergenic not near genes chr3R_19_6860001 chr3R_6860001 RAL-406 2054 chr3R 6891243 6891351 chr3R 6891339 6891548 11 180 3.0 3.0 3.0 2.8 305 chr3R 6891243 intergenic not near genes chr3R 6891396 intergenic not near genes chr3R 6891548 intergenic not near genes chr3R_11_6890001 chr3R_6890001 RAL-406 2055 chr3R 7103263 7103317 chr3R 7103359 7103380 14 80 4.0 3.5 3.8 2.9 117 chr3R 7103263 intron Alh - chr3R 7103322 intron Alh - chr3R 7103380 intron Alh - chr3R_14_7100001 chr3R_7100001 RAL-406 2056 chr3R 7126485 7126532 chr3R 7126600 7126647 26 114 7.0 8.5 7.8 3.0 162 chr3R 7126485 3` UTR,3` UTR CG10098 +,CG10068 - chr3R 7126566 3` UTR CG10068 - chr3R 7126647 3` UTR CG10068 - chr3R_26_7125001 chr3R_7125001 RAL-406 2057 chr3R 7173664 7173708 chr3R 7173764 7173808 16 98 3.5 8.0 5.8 2.4 144 chr3R 7173664 intron sas + chr3R 7173736 intron sas + chr3R 7173808 intron sas + chr3R_16_7170001 chr3R_7170001 RAL-406 2058 chr3R 7210575 7210616 chr3R 7210672 7210722 8 102 0.0 6.0 3.0 2.0 147 chr3R 7210575 intergenic not near genes chr3R 7210648 intergenic not near genes chr3R 7210722 intergenic not near genes chr3R_8_7210001 chr3R_7210001 RAL-406 2059 chr3R 7217438 7217489 chr3R 7217679 7217715 28 238 8.0 4.0 6.0 4.0 277 chr3R 7217438 intergenic CG14605 -,CG14606 - chr3R 7217576 intergenic CG14605 -,CG14606 - chr3R 7217715 3` UTR CG14605 - chr3R_28_7215001 chr3R_7215001 RAL-406 2060 chr3R 7252405 7252419 chr3R 7252495 7252510 7 94 8.0 10.0 9.0 0.7 105 chr3R 7252405 3` UTR Gld - chr3R 7252458 3` UTR Gld - chr3R 7252510 3` UTR Gld - chr3R_7_7250001 chr3R_7250001 RAL-406 2061 chr3R 7319778 7319792 chr3R 7319878 7319887 4 99 5.0 6.0 5.5 0.6 109 chr3R 7319778 intergenic not near genes chr3R 7319832 intergenic not near genes chr3R 7319887 intergenic not near genes chr3R_4_7315001 chr3R_7315001 RAL-406 2062 chr3R 7341379 7341402 chr3R 7341480 7341504 5 101 6.0 4.0 5.0 0.8 125 chr3R 7341379 intergenic not near genes chr3R 7341442 intergenic not near genes chr3R 7341504 intergenic not near genes chr3R_5_7340001 chr3R_7340001 RAL-406 2063 chr3R 7417417 7417430 chr3R 7417513 7417516 8 93 7.0 13.5 10.2 0.7 99 chr3R 7417417 intergenic not near genes chr3R 7417466 intergenic not near genes chr3R 7417516 intergenic not near genes chr3R_8_7415001 chr3R_7415001 RAL-406 2064 chr3R 7447970 7448012 chr3R 7448068 7448110 16 96 6.0 4.5 5.2 2.6 140 chr3R 7447970 intergenic not near genes chr3R 7448040 intergenic not near genes chr3R 7448110 intergenic not near genes chr3R_16_7445001 chr3R_7445001 RAL-406 2065 chr3R 7617972 7618019 chr3R 7618084 7618131 22 112 3.5 3.5 3.5 4.9 159 chr3R 7617972 intron CG34127 - chr3R 7618052 intron CG34127 - chr3R 7618131 intron CG34127 - chr3R_22_7615001 chr3R_7615001 RAL-406 2066 chr3R 7621526 7621558 chr3R 7621637 7621668 5 111 3.0 3.0 3.0 1.2 142 chr3R 7621526 intron CG34127 - chr3R 7621597 intron CG34127 - chr3R 7621668 intron CG34127 - chr3R_5_7620001 chr3R_7620001 RAL-406 2067 chr3R 7694557 7694607 chr3R 7713638 7713688 invader3 19 19079 8.5 2.5 5.5 2.9 19131 chr3R 7694557 3` UTR Nlg1 + chr3R 7704122 intergenic not near genes chr3R 7713688 intergenic not near genes chr3R_19_7700001 chr3R_7700001 RAL-406 2068 chr3R 7721125 7721170 chr3R 7721225 7721270 20 94 6.0 4.0 5.0 3.3 145 chr3R 7721125 intergenic CR44260 + chr3R 7721198 intergenic CR44260 + chr3R 7721270 intergenic CR44260 + chr3R_20_7720001 chr3R_7720001 RAL-406 2069 chr3R 7729446 7729495 chr3R 7737404 7737453 Stalker2 14 7956 6.0 7.5 6.8 1.8 8007 chr3R 7729446 intergenic not near genes chr3R 7733450 intergenic not near genes chr3R 7737453 intergenic not near genes chr3R_14_7730001 chr3R_7730001 RAL-406 2070 chr3R 7738069 7738122 chr3R 7738195 7738247 26 123 5.0 3.0 4.0 5.2 178 chr3R 7738069 intergenic not near genes chr3R 7738158 intergenic not near genes chr3R 7738247 intergenic not near genes chr3R_26_7735001 chr3R_7735001 RAL-406 2071 chr3R 7881634 7881686 chr3R 7881874 7881912 16 232 2.0 4.0 3.0 4.0 278 chr3R 7881634 intron CG17816 - chr3R 7881773 intron CG17816 - chr3R 7881912 intron CG17816 - chr3R_16_7880001 chr3R_7880001 RAL-406 2072 chr3R 8049044 8049064 chr3R 8049625 8049658 7 586 6.0 4.0 5.0 1.2 614 chr3R 8049044 intron CG43060 + chr3R 8049351 intron,exon CG43060 +,CG43618 + chr3R 8049658 intron CG43060 + chr3R_7_8045001 chr3R_8045001 RAL-406 2073 chr3R 8072840 8072873 chr3R 8072928 8072959 6 86 6.5 4.0 5.2 1.0 119 chr3R 8072840 intron mAChR-B + chr3R 8072900 intron mAChR-B + chr3R 8072959 intron mAChR-B + chr3R_6_8070001 chr3R_8070001 RAL-406 2074 chr3R 8090250 8090304 chr3R 8090447 8090450 27 192 5.5 8.0 6.8 3.5 200 chr3R 8090250 5` UTR CR44330 + chr3R 8090350 intergenic CR44330 + chr3R 8090450 intergenic CR44330 + chr3R_27_8090001 chr3R_8090001 RAL-406 2075 chr3R 8094390 8094436 chr3R 8099715 8099761 Transpac 25 5324 5.5 9.0 7.2 3.0 5371 chr3R 8094390 intron CG7900 + chr3R 8097076 intron CG7900 + chr3R 8099761 intron CG7900 + chr3R_25_8095001 chr3R_8095001 RAL-406 2076 chr3R 8101765 8101789 chr3R 8104864 8104893 G2 4 3102 2.0 10.0 6.0 0.6 3128 chr3R 8101765 exon CG7900 + chr3R 8103329 intron CG7900 + chr3R 8104893 3` UTR CG7900 + chr3R_4_8100001 chr3R_8100001 RAL-406 2077 chr3R 8207545 8207588 chr3R 8208398 8208435 F-element 7 844 2.5 1.5 2.0 2.3 890 chr3R 8207545 intergenic not near genes chr3R 8207990 intergenic not near genes chr3R 8208435 intergenic not near genes chr3R_7_8205001 chr3R_8205001 RAL-406 2078 chr3R 8287347 8287397 chr3R 8287472 8287523 26 121 5.5 6.0 5.8 3.8 176 chr3R 8287347 5` UTR CR44318 + chr3R 8287435 5` UTR CR44318 + chr3R 8287523 5` UTR CR44318 + chr3R_26_8285001 chr3R_8285001 RAL-406 2079 chr3R 8403010 8403021 chr3R 8412181 8412200 roo 5 9177 6.5 4.0 5.2 0.8 9190 chr3R 8403010 intron CG45263 - chr3R 8407605 intron CG45263 - chr3R 8412200 intron CG45263 - chr3R_5_8405001 chr3R_8405001 RAL-406 2080 chr3R 8403025 8403039 chr3R 8412175 8412215 roo 5 9164 4.5 3.5 4.0 1.0 9190 chr3R 8403025 intron CG45263 - chr3R 8407620 intron CG45263 - chr3R 8412215 intron CG45263 - chr3R_5_8405001 chr3R_8405001 RAL-406 2081 chr3R 8570482 8570506 chr3R 8575112 8575152 HMS-Beagle 7 4644 2.5 4.5 3.5 1.6 4670 chr3R 8570482 intergenic not near genes chr3R 8572817 intergenic not near genes chr3R 8575152 intergenic not near genes chr3R_7_8570001 chr3R_8570001 RAL-406 2082 chr3R 8576145 8576191 chr3R 8576336 8576365 20 188 1.5 4.0 2.8 5.3 220 chr3R 8576145 intergenic not near genes chr3R 8576255 intergenic not near genes chr3R 8576365 intergenic not near genes chr3R_20_8575001 chr3R_8575001 RAL-406 2083 chr3R 8601762 8601799 chr3R 8610935 8610972 roo 8 9165 3.5 4.5 4.0 1.6 9210 chr3R 8601762 intron 5-HT2B + chr3R 8606367 intron 5-HT2B + chr3R 8610972 intron 5-HT2B + chr3R_8_8605001 chr3R_8605001 RAL-406 2084 chr3R 8630890 8630933 chr3R 8631016 8631049 8 120 4.5 4.5 4.5 1.5 159 chr3R 8630890 intergenic not near genes chr3R 8630970 intergenic not near genes chr3R 8631049 intergenic not near genes chr3R_8_8630001 chr3R_8630001 RAL-406 2085 chr3R 8707354 8707383 chr3R 8709815 8709822 jockey 9 2458 3.5 7.0 5.2 1.5 2468 chr3R 8707354 intergenic not near genes chr3R 8708588 intergenic not near genes chr3R 8709822 intergenic not near genes chr3R_9_8705001 chr3R_8705001 RAL-406 2086 chr3R 8798640 8798686 chr3R 8798738 8798787 14 98 3.5 3.0 3.2 3.3 147 chr3R 8798640 intron,intron Pif1A -,Pif1B - chr3R 8798714 intron,intron Pif1A -,Pif1B - chr3R 8798787 intron,intron Pif1A -,Pif1B - chr3R_14_8795001 chr3R_8795001 RAL-406 2087 chr3R 8890474 8890499 chr3R 8890579 8890587 4 100 3.5 7.5 5.5 0.6 113 chr3R 8890474 intron pyd - chr3R 8890530 intron pyd - chr3R 8890587 intron pyd - chr3R_4_8890001 chr3R_8890001 RAL-406 2088 chr3R 8894852 8894897 chr3R 8896028 8896072 1360 11 1173 6.0 8.0 7.0 1.4 1220 chr3R 8894852 intron pyd - chr3R 8895462 intron pyd - chr3R 8896072 intron pyd - chr3R_11_8895001 chr3R_8895001 RAL-406 2089 chr3R 8979863 8979917 chr3R 8979966 8980020 17 101 3.5 7.5 5.5 2.6 157 chr3R 8979863 intergenic not near genes chr3R 8979942 intergenic not near genes chr3R 8980020 intergenic not near genes chr3R_17_8975001 chr3R_8975001 RAL-406 2090 chr3R 9101834 9101868 chr3R 9101937 9101986 12 112 5.0 5.0 5.0 2.0 152 chr3R 9101834 intron pum - chr3R 9101910 intron pum - chr3R 9101986 intron pum - chr3R_12_9100001 chr3R_9100001 RAL-406 2091 chr3R 9104455 9104496 chr3R 9104565 9104576 13 104 6.0 4.5 5.2 2.1 121 chr3R 9104455 intron pum - chr3R 9104516 intron pum - chr3R 9104576 intron pum - chr3R_13_9100001 chr3R_9100001 RAL-406 2092 chr3R 9108846 9108882 chr3R 9108942 9108978 12 95 8.0 4.5 6.2 1.7 132 chr3R 9108846 intron pum - chr3R 9108912 intron pum - chr3R 9108978 intron pum - chr3R_12_9105001 chr3R_9105001 RAL-406 2093 chr3R 9150210 9150261 chr3R 9150351 9150404 27 142 8.0 3.5 5.8 4.0 194 chr3R 9150210 intron pum - chr3R 9150307 intron pum - chr3R 9150404 intron pum - chr3R_27_9150001 chr3R_9150001 RAL-406 2094 chr3R 9278772 9278808 chr3R 9284041 9284088 Rt1a 8 5278 4.0 5.0 4.5 1.5 5316 chr3R 9278772 intergenic not near genes chr3R 9281430 intergenic not near genes chr3R 9284088 intergenic not near genes chr3R_8_9280001 chr3R_9280001 RAL-406 2095 chr3R 9304511 9304544 chr3R 9311818 9311826 Stalker4 4 7296 13.0 4.0 8.5 0.4 7315 chr3R 9304511 intron CG8861 - chr3R 9308168 intron CG8861 - chr3R 9311826 intron CG8861 - chr3R_4_9305001 chr3R_9305001 RAL-406 2096 chr3R 9319558 9319603 chr3R 9320013 9320055 jockey 15 451 3.5 6.5 5.0 2.5 497 chr3R 9319558 intron CG8861 - chr3R 9319806 intron CG8861 - chr3R 9320055 intron CG8861 - chr3R_15_9315001 chr3R_9315001 RAL-406 2097 chr3R 9361821 9361835 chr3R 9362067 9362096 pogo 5 253 6.5 10.0 8.2 0.5 275 chr3R 9361821 3` UTR CG45050 + chr3R 9361958 3` UTR CG45050 + chr3R 9362096 3` UTR CG45050 + chr3R_5_9360001 chr3R_9360001 RAL-406 2098 chr3R 9382799 9382849 chr3R 9382944 9382991 12 139 1.0 4.5 2.8 3.2 192 chr3R 9382799 intron FER - chr3R 9382895 intron FER - chr3R 9382991 intron FER - chr3R_12_9380001 chr3R_9380001 RAL-406 2099 chr3R 9447435 9447461 chr3R 9447559 9447585 7 124 4.5 8.5 6.5 0.9 150 chr3R 9447435 intron ps + chr3R 9447510 intron ps + chr3R 9447585 intron ps + chr3R_7_9445001 chr3R_9445001 RAL-406 2100 chr3R 9610837 9610867 chr3R 9610993 9611007 9 156 5.0 5.5 5.2 1.5 170 chr3R 9610837 intron CG8312 + chr3R 9610922 intron CG8312 + chr3R 9611007 intron CG8312 + chr3R_9_9610001 chr3R_9610001 RAL-406 2101 chr3R 10085938 10085979 chr3R 10086256 10086291 13 316 7.0 5.5 6.2 1.8 353 chr3R 10085938 intron CR45054 + chr3R 10086114 intron CR45054 + chr3R 10086291 intron CR45054 + chr3R_13_10085001 chr3R_10085001 RAL-406 2102 chr3R 10174105 10174155 chr3R 10174207 10174239 13 97 5.5 5.0 5.2 2.1 134 chr3R 10174105 intron CG12814 - chr3R 10174172 intron CG12814 - chr3R 10174239 intron CG12814 - chr3R_13_10170001 chr3R_10170001 RAL-406 2103 chr3R 10231765 10231809 chr3R 10237362 10237406 mdg3 18 5594 5.5 7.5 6.5 2.4 5641 chr3R 10231765 intron CG42795 + chr3R 10234586 intron CG42795 + chr3R 10237406 intron CG42795 + chr3R_18_10230001 chr3R_10230001 RAL-406 2104 chr3R 10255364 10255366 chr3R 10260824 10260826 I-element 4 5460 21.0 7.0 14.0 0.3 5462 chr3R 10255364 3` UTR Sirt6 - chr3R 10258095 intron Sirt6 - chr3R 10260826 exon Sirt6 - chr3R_4_10255001 chr3R_10255001 RAL-406 2105 chr3R 10255367 10255387 chr3R 10260822 10260847 I-element 12 5457 14.5 6.5 10.5 1.0 5480 chr3R 10255367 3` UTR Sirt6 - chr3R 10258107 intron Sirt6 - chr3R 10260847 exon Sirt6 - chr3R_12_10255001 chr3R_10255001 RAL-406 2106 chr3R 10275563 10275570 chr3R 10275634 10275667 6 92 11.5 8.5 10.0 0.5 104 chr3R 10275563 intron CG43143 + chr3R 10275615 intron CG43143 + chr3R 10275667 intron CG43143 + chr3R_6_10275001 chr3R_10275001 RAL-406 2107 chr3R 10275575 10275583 chr3R 10275632 10275679 6 90 9.0 7.5 8.2 0.7 104 chr3R 10275575 intron CG43143 + chr3R 10275627 intron CG43143 + chr3R 10275679 intron CG43143 + chr3R_6_10275001 chr3R_10275001 RAL-406 2108 chr3R 10306951 10306991 chr3R 10312190 10312245 25 5242 21.0 47.0 34.0 0.7 5294 chr3R 10306951 exon CG43143 + chr3R 10309598 exon CG6293 - chr3R 10312245 3` UTR Bruce - chr3R_25_10305001 chr3R_10305001 RAL-406 2109 chr3R 10403041 10403062 chr3R 10403137 10403163 6 97 6.0 11.0 8.5 0.6 122 chr3R 10403041 3` UTR CG6325 - chr3R 10403102 3` UTR CG6325 - chr3R 10403163 3` UTR CG6325 - chr3R_6_10400001 chr3R_10400001 RAL-406 2110 chr3R 10417502 10417506 chr3R 10417813 10417831 4 336 4.5 3.5 4.0 0.8 329 chr3R 10417502 intergenic not near genes chr3R 10417666 intergenic not near genes chr3R 10417831 intergenic not near genes chr3R_4_10415001 chr3R_10415001 RAL-406 2111 chr3R 10441661 10441672 chr3R 10441796 10441807 5 135 10.0 4.5 7.2 0.6 146 chr3R 10441661 intergenic not near genes chr3R 10441734 intergenic not near genes chr3R 10441807 intergenic not near genes chr3R_5_10440001 chr3R_10440001 RAL-406 2112 chr3R 10441675 10441712 chr3R 10441795 10441816 16 130 3.0 4.0 3.5 3.6 141 chr3R 10441675 intergenic not near genes chr3R 10441746 intergenic not near genes chr3R 10441816 intergenic not near genes chr3R_16_10440001 chr3R_10440001 RAL-406 2113 chr3R 10563443 10563490 chr3R 10563561 10563608 10 113 4.5 7.0 5.8 1.5 165 chr3R 10563443 intron hth - chr3R 10563526 intron hth - chr3R 10563608 intron hth - chr3R_10_10560001 chr3R_10560001 RAL-406 2114 chr3R 10619219 10619260 chr3R 10619322 10619346 16 101 3.0 8.5 5.8 2.4 127 chr3R 10619219 intergenic not near genes chr3R 10619282 intergenic not near genes chr3R 10619346 intergenic not near genes chr3R_16_10615001 chr3R_10615001 RAL-406 2115 chr3R 10627595 10627629 chr3R 10627727 10627757 7 129 6.0 5.5 5.8 1.0 162 chr3R 10627595 intergenic not near genes chr3R 10627676 intergenic not near genes chr3R 10627757 intergenic not near genes chr3R_7_10625001 chr3R_10625001 RAL-406 2116 chr3R 10730995 10731026 chr3R 10731180 10731212 11 185 4.0 8.5 6.2 1.5 217 chr3R 10730995 intergenic not near genes chr3R 10731104 intergenic not near genes chr3R 10731212 intergenic not near genes chr3R_11_10730001 chr3R_10730001 RAL-406 2117 chr3R 10751584 10751633 chr3R 10751754 10751796 13 165 4.0 4.5 4.2 2.5 212 chr3R 10751584 intergenic TkR86C - chr3R 10751690 intergenic TkR86C - chr3R 10751796 intergenic not near genes chr3R_13_10750001 chr3R_10750001 RAL-406 2118 chr3R 10785796 10785800 chr3R 10785895 10785899 5 99 12.5 9.0 10.8 0.4 103 chr3R 10785796 intron Rbp1 + chr3R 10785848 intron Rbp1 + chr3R 10785899 intron Rbp1 + chr3R_5_10785001 chr3R_10785001 RAL-406 2119 chr3R 10785802 10785841 chr3R 10785891 10785940 23 98 4.5 8.5 6.5 3.1 138 chr3R 10785802 intron Rbp1 + chr3R 10785871 intron Rbp1 + chr3R 10785940 intron Rbp1 + chr3R_23_10785001 chr3R_10785001 RAL-406 2120 chr3R 10804152 10804207 chr3R 10811704 10811759 17.6 29 7552 4.0 9.5 6.8 3.7 7607 chr3R 10804152 intergenic CG14692 - chr3R 10807956 intergenic not near genes chr3R 10811759 3` UTR CG14693 - chr3R_29_10805001 chr3R_10805001 RAL-406 2121 chr3R 10886862 10886904 chr3R 10886962 10887004 13 98 2.0 2.5 2.2 4.1 142 chr3R 10886862 intron Leash + chr3R 10886933 intron Leash + chr3R 10887004 intron Leash + chr3R_13_10885001 chr3R_10885001 RAL-406 2122 chr3R 11085457 11085481 chr3R 11085539 11085573 10 92 7.0 4.0 5.5 1.5 116 chr3R 11085457 3` UTR CR44940 - chr3R 11085515 intergenic CR44940 - chr3R 11085573 intergenic CR44940 - chr3R_10_11085001 chr3R_11085001 RAL-406 2123 chr3R 11103150 11103172 chr3R 11103252 11103261 7 99 0.0 0.0 0.0 7.0 111 chr3R 11103150 intergenic not near genes chr3R 11103206 intergenic not near genes chr3R 11103261 intergenic not near genes chr3R_7_11100001 chr3R_11100001 RAL-406 2124 chr3R 11242236 11242283 chr3R 11242342 11242376 14 103 4.0 4.0 4.0 2.8 140 chr3R 11242236 3` UTR CG17734 - chr3R 11242306 3` UTR CG17734 - chr3R 11242376 3` UTR CG17734 - chr3R_14_11240001 chr3R_11240001 RAL-406 2125 chr3R 11313210 11313261 chr3R 11313319 11313370 20 104 1.5 2.0 1.8 7.1 160 chr3R 11313210 intergenic not near genes chr3R 11313290 intergenic not near genes chr3R 11313370 intergenic not near genes chr3R_20_11310001 chr3R_11310001 RAL-406 2126 chr3R 11379221 11379257 chr3R 11388391 11388432 roo 14 9170 8.0 5.5 6.8 1.8 9211 chr3R 11379221 intron pros + chr3R 11383826 intron pros + chr3R 11388432 intron pros + chr3R_14_11380001 chr3R_11380001 RAL-406 2127 chr3R 11545860 11545908 chr3R 11545997 11546045 23 134 4.0 9.5 6.8 2.9 185 chr3R 11545860 intergenic not near genes chr3R 11545952 intergenic not near genes chr3R 11546045 intergenic not near genes chr3R_23_11545001 chr3R_11545001 RAL-406 2128 chr3R 11694706 11694756 chr3R 11694819 11694828 30 105 4.5 5.0 4.8 5.2 122 chr3R 11694706 intergenic Fer3 - chr3R 11694767 intergenic Fer3 - chr3R 11694828 intergenic not near genes chr3R_30_11690001 chr3R_11690001 RAL-406 2129 chr3R 11695718 11695767 chr3R 11695819 11695868 21 97 9.0 9.0 9.0 2.1 150 chr3R 11695718 intergenic not near genes chr3R 11695793 intergenic not near genes chr3R 11695868 intergenic not near genes chr3R_21_11695001 chr3R_11695001 RAL-406 2130 chr3R 11708610 11708662 chr3R 11708838 11708890 16 226 4.0 5.0 4.5 2.9 280 chr3R 11708610 intergenic not near genes chr3R 11708750 intergenic not near genes chr3R 11708890 intergenic not near genes chr3R_16_11705001 chr3R_11705001 RAL-406 2131 chr3R 11722008 11722057 chr3R 11722120 11722169 30 108 7.0 3.5 5.2 4.8 161 chr3R 11722008 5` UTR CG12594 + chr3R 11722088 5` UTR CG12594 + chr3R 11722169 5` UTR CG12594 + chr3R_30_11720001 chr3R_11720001 RAL-406 2132 chr3R 11830331 11830359 chr3R 11830435 11830462 11 103 3.5 5.5 4.5 2.0 131 chr3R 11830331 intron CG6959 - chr3R 11830396 intron CG6959 - chr3R 11830462 intron CG6959 - chr3R_11_11830001 chr3R_11830001 RAL-406 2133 chr3R 11841049 11841100 chr3R 11846255 11846279 BS 6 5198 1.0 5.0 3.0 1.5 5230 chr3R 11841049 intron CG6959 - chr3R 11843664 intron CG6959 - chr3R 11846279 intron CG6959 - chr3R_6_11840001 chr3R_11840001 RAL-406 2134 chr3R 11853423 11853469 chr3R 11853587 11853636 14 160 0.5 6.5 3.5 3.1 213 chr3R 11853423 intron CG6959 - chr3R 11853530 intron CG6959 - chr3R 11853636 intron CG6959 - chr3R_14_11850001 chr3R_11850001 RAL-406 2135 chr3R 11853754 11853786 chr3R 11853879 11853906 13 123 9.5 8.0 8.8 1.3 152 chr3R 11853754 intron CG6959 - chr3R 11853830 intron CG6959 - chr3R 11853906 intron CG6959 - chr3R_13_11850001 chr3R_11850001 RAL-406 2136 chr3R 11853791 11853801 chr3R 11853878 11853925 5 117 6.5 8.0 7.2 0.6 134 chr3R 11853791 intron CG6959 - chr3R 11853858 intron CG6959 - chr3R 11853925 intron CG6959 - chr3R_5_11850001 chr3R_11850001 RAL-406 2137 chr3R 11919290 11919332 chr3R 11919391 11919414 8 89 3.0 3.0 3.0 2.0 124 chr3R 11919290 intron Cad87A - chr3R 11919352 intron Cad87A - chr3R 11919414 intron Cad87A - chr3R_8_11915001 chr3R_11915001 RAL-406 2138 chr3R 11945363 11945400 chr3R 11945481 11945518 7 112 3.0 5.5 4.2 1.3 155 chr3R 11945363 intron Cad87A - chr3R 11945440 intron Cad87A - chr3R 11945518 intron Cad87A - chr3R_7_11945001 chr3R_11945001 RAL-406 2139 chr3R 12022871 12022912 chr3R 12025060 12025075 pogo 12 2192 4.5 4.0 4.2 2.3 2204 chr3R 12022871 intergenic not near genes chr3R 12023973 intergenic not near genes chr3R 12025075 intergenic not near genes chr3R_12_12020001 chr3R_12020001 RAL-406 2140 chr3R 12037299 12037338 chr3R 12037576 12037613 4 275 0.0 3.5 1.8 1.4 314 chr3R 12037299 intergenic not near genes chr3R 12037456 intergenic not near genes chr3R 12037613 intergenic not near genes chr3R_4_12035001 chr3R_12035001 RAL-406 2141 chr3R 12040170 12040221 chr3R 12040291 12040327 12 108 5.5 2.5 4.0 2.4 157 chr3R 12040170 intergenic CG14736 + chr3R 12040248 intergenic CG14736 + chr3R 12040327 intergenic CG14736 + chr3R_12_12040001 chr3R_12040001 RAL-406 2142 chr3R 12081996 12082028 chr3R 12082072 12082104 16 83 2.5 2.5 2.5 4.6 108 chr3R 12081996 intron CG14741 - chr3R 12082050 intron CG14741 - chr3R 12082104 intron CG14741 - chr3R_16_12080001 chr3R_12080001 RAL-406 2143 chr3R 12111866 12111920 chr3R 12111971 12112004 8 92 0.0 5.0 2.5 2.3 138 chr3R 12111866 intergenic dpr17 + chr3R 12111935 intergenic not near genes chr3R 12112004 intergenic not near genes chr3R_8_12110001 chr3R_12110001 RAL-406 2144 chr3R 12154035 12154074 chr3R 12154486 12154491 5 438 39.5 10.5 25.0 0.2 456 chr3R 12154035 intron dpr15 - chr3R 12154263 intron dpr15 - chr3R 12154491 intron dpr15 - chr3R_5_12150001 chr3R_12150001 RAL-406 2145 chr3R 12175243 12175262 chr3R 12175343 12175363 8 101 2.0 8.0 5.0 1.3 120 chr3R 12175243 intergenic not near genes chr3R 12175303 intergenic not near genes chr3R 12175363 intergenic not near genes chr3R_8_12175001 chr3R_12175001 RAL-406 2146 chr3R 12183165 12183204 chr3R 12183271 12183310 8 104 2.0 8.0 5.0 1.3 145 chr3R 12183165 intergenic not near genes chr3R 12183238 intergenic not near genes chr3R 12183310 intergenic not near genes chr3R_8_12180001 chr3R_12180001 RAL-406 2147 chr3R 12267838 12267883 chr3R 12267937 12267983 23 99 5.0 5.0 5.0 3.8 145 chr3R 12267838 intron svp + chr3R 12267910 intron svp + chr3R 12267983 intron svp + chr3R_23_12265001 chr3R_12265001 RAL-406 2148 chr3R 12274045 12274078 chr3R 12274131 12274133 4 76 0.0 0.5 0.2 3.3 88 chr3R 12274045 intron svp + chr3R 12274089 intron svp + chr3R 12274133 intron svp + chr3R_4_12270001 chr3R_12270001 RAL-406 2149 chr3R 12393661 12393711 chr3R 12393768 12393818 22 103 4.0 6.0 5.0 3.7 157 chr3R 12393661 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12393740 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12393818 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R_22_12390001 chr3R_12390001 RAL-406 2150 chr3R 12426412 12426463 chr3R 12426509 12426560 24 94 6.0 6.0 6.0 3.4 148 chr3R 12426412 intergenic Sas +,Pp1-87B - chr3R 12426486 intergenic Sas + chr3R 12426560 intergenic Sas + chr3R_24_12425001 chr3R_12425001 RAL-406 2151 chr3R 12543590 12543628 chr3R 12543700 12543738 11 107 9.0 4.0 6.5 1.5 148 chr3R 12543590 intron Octbeta3R - chr3R 12543664 intron Octbeta3R - chr3R 12543738 intron Octbeta3R - chr3R_11_12540001 chr3R_12540001 RAL-406 2152 chr3R 12725965 12725970 chr3R 12726056 12726070 5 107 1.0 4.5 2.8 1.3 105 chr3R 12725965 intergenic not near genes chr3R 12726018 intergenic not near genes chr3R 12726070 intergenic not near genes chr3R_5_12725001 chr3R_12725001 RAL-406 2153 chr3R 12733473 12733492 chr3R 12733556 12733572 4 88 4.5 4.5 4.5 0.7 99 chr3R 12733473 intergenic not near genes chr3R 12733522 intergenic not near genes chr3R 12733572 intergenic not near genes chr3R_4_12730001 chr3R_12730001 RAL-406 2154 chr3R 12739021 12739026 chr3R 12739117 12739122 4 96 9.5 6.5 8.0 0.4 101 chr3R 12739021 intergenic not near genes chr3R 12739072 intergenic not near genes chr3R 12739122 intergenic not near genes chr3R_4_12735001 chr3R_12735001 RAL-406 2155 chr3R 12739028 12739068 chr3R 12739116 12739164 16 92 5.0 6.5 5.8 2.4 136 chr3R 12739028 intergenic not near genes chr3R 12739096 intergenic not near genes chr3R 12739164 intergenic CG5724 + chr3R_16_12735001 chr3R_12735001 RAL-406 2156 chr3R 12763125 12763154 chr3R 12763222 12763251 16 97 0.0 7.0 3.5 3.6 126 chr3R 12763125 intron beat-Vc - chr3R 12763188 intron beat-Vc - chr3R 12763251 intron beat-Vc - chr3R_16_12760001 chr3R_12760001 RAL-406 2157 chr3R 12787939 12787952 chr3R 12788042 12788047 9 101 0.0 2.5 1.2 4.1 108 chr3R 12787939 intergenic not near genes chr3R 12787993 intergenic not near genes chr3R 12788047 intergenic not near genes chr3R_9_12785001 chr3R_12785001 RAL-406 2158 chr3R 12864543 12864595 chr3R 12865048 12865100 roo 6 505 1.0 3.0 2.0 2.0 557 chr3R 12864543 intergenic not near genes chr3R 12864822 intergenic not near genes chr3R 12865100 intergenic not near genes chr3R_6_12860001 chr3R_12860001 RAL-406 2159 chr3R 12866468 12866520 chr3R 12866639 12866691 26 170 3.5 2.5 3.0 6.5 223 chr3R 12866468 intergenic not near genes chr3R 12866580 intergenic not near genes chr3R 12866691 intergenic not near genes chr3R_26_12865001 chr3R_12865001 RAL-406 2160 chr3R 12876936 12876983 chr3R 12877039 12877084 20 101 6.5 4.0 5.2 3.2 148 chr3R 12876936 intergenic not near genes chr3R 12877010 intergenic not near genes chr3R 12877084 intergenic not near genes chr3R_20_12875001 chr3R_12875001 RAL-406 2161 chr3R 12888277 12888328 chr3R 12888385 12888436 11 102 3.5 3.0 3.2 2.6 159 chr3R 12888277 intergenic not near genes chr3R 12888356 intergenic not near genes chr3R 12888436 intergenic not near genes chr3R_11_12885001 chr3R_12885001 RAL-406 2162 chr3R 12894582 12894626 chr3R 12894715 12894759 10 130 0.5 0.0 0.2 8.3 177 chr3R 12894582 intergenic not near genes chr3R 12894670 intergenic not near genes chr3R 12894759 intergenic not near genes chr3R_10_12890001 chr3R_12890001 RAL-406 2163 chr3R 13059944 13059975 chr3R 13060157 13060180 9 207 5.5 4.0 4.8 1.6 236 chr3R 13059944 intron sim + chr3R 13060062 intron sim + chr3R 13060180 intron sim + chr3R_9_13060001 chr3R_13060001 RAL-406 2164 chr3R 13066984 13067132 chr3R 13067091 13067228 24 98 0.5 0.0 0.2 20.0 244 chr3R 13066984 intron sim + chr3R 13067106 intron sim + chr3R 13067228 intron sim + chr3R_24_13065001 chr3R_13065001 RAL-406 2165 chr3R 13120769 13120787 chr3R 13120851 13120854 6 86 3.5 1.0 2.2 1.9 85 chr3R 13120769 intron timeout + chr3R 13120812 intron timeout + chr3R 13120854 intron timeout + chr3R_6_13120001 chr3R_13120001 RAL-406 2166 chr3R 13135810 13135856 chr3R 13138005 13138051 pogo 20 2194 5.0 6.5 5.8 2.9 2241 chr3R 13135810 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136930 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138051 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_20_13135001 chr3R_13135001 RAL-406 2167 chr3R 13143022 13143062 chr3R 13148618 13148658 mdg3 6 5582 3.5 6.0 4.8 1.0 5636 chr3R 13143022 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145840 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148658 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_6_13145001 chr3R_13145001 RAL-406 2168 chr3R 13194077 13194128 chr3R 13194686 13194737 20 608 6.0 8.5 7.2 2.4 660 chr3R 13194077 intergenic not near genes chr3R 13194407 intergenic not near genes chr3R 13194737 intergenic not near genes chr3R_20_13190001 chr3R_13190001 RAL-406 2169 chr3R 13195934 13195976 chr3R 13196049 13196081 7 111 10.0 3.0 6.5 0.9 147 chr3R 13195934 intergenic not near genes chr3R 13196008 intergenic not near genes chr3R 13196081 intergenic not near genes chr3R_7_13195001 chr3R_13195001 RAL-406 2170 chr3R 13311636 13311641 chr3R 13318892 13318912 Doc 6 7266 7.0 10.5 8.8 0.6 7276 chr3R 13311636 exon CG32473 + chr3R 13315274 intergenic not near genes chr3R 13318912 intergenic CG45080 - chr3R_6_13315001 chr3R_13315001 RAL-406 2171 chr3R 13336661 13336674 chr3R 13336745 13336767 4 90 1.5 4.0 2.8 1.1 106 chr3R 13336661 intergenic not near genes chr3R 13336714 intergenic not near genes chr3R 13336767 intergenic not near genes chr3R_4_13335001 chr3R_13335001 RAL-406 2172 chr3R 13336687 13336691 chr3R 13336743 13336776 4 64 1.0 3.0 2.0 1.3 89 chr3R 13336687 intergenic not near genes chr3R 13336732 intergenic not near genes chr3R 13336776 intergenic not near genes chr3R_4_13335001 chr3R_13335001 RAL-406 2173 chr3R 13363213 13363250 chr3R 13363316 13363353 6 99 4.5 3.0 3.8 1.2 140 chr3R 13363213 intron poly - chr3R 13363283 intron poly - chr3R 13363353 intron poly - chr3R_6_13360001 chr3R_13360001 RAL-406 2174 chr3R 13598072 13598116 chr3R 13598165 13598206 17 94 5.0 4.5 4.8 2.9 134 chr3R 13598072 intergenic not near genes chr3R 13598139 intergenic not near genes chr3R 13598206 intergenic not near genes chr3R_17_13595001 chr3R_13595001 RAL-406 2175 chr3R 13603037 13603048 chr3R 13603148 13603158 7 110 6.0 7.0 6.5 0.9 121 chr3R 13603037 intergenic not near genes chr3R 13603098 intergenic not near genes chr3R 13603158 intergenic not near genes chr3R_7_13600001 chr3R_13600001 RAL-406 2176 chr3R 13603049 13603074 chr3R 13603145 13603185 6 106 2.5 7.0 4.8 1.0 136 chr3R 13603049 intergenic not near genes chr3R 13603117 intergenic not near genes chr3R 13603185 intergenic not near genes chr3R_6_13600001 chr3R_13600001 RAL-406 2177 chr3R 13672925 13672976 chr3R 13673023 13673065 28 97 5.0 8.0 6.5 3.7 140 chr3R 13672925 intron Task6 - chr3R 13672995 intron Task6 - chr3R 13673065 intron Task6 - chr3R_28_13670001 chr3R_13670001 RAL-406 2178 chr3R 13714504 13714548 chr3R 13714663 13714707 18 158 0.0 4.5 2.2 5.6 203 chr3R 13714504 intergenic CR34044 - chr3R 13714606 intergenic CR34044 - chr3R 13714707 intergenic CG34383 + chr3R_18_13710001 chr3R_13710001 RAL-406 2179 chr3R 13782032 13782086 chr3R 13782133 13782187 14 96 3.0 1.0 2.0 4.7 155 chr3R 13782032 exon CG9286 + chr3R 13782110 intergenic CG9286 +,Dip-B + chr3R 13782187 intergenic Dip-B +,CG9286 + chr3R_14_13780001 chr3R_13780001 RAL-406 2180 chr3R 13850290 13850338 chr3R 13850405 13850446 7 109 0.0 2.5 1.2 3.2 156 chr3R 13850290 intergenic not near genes chr3R 13850368 intergenic not near genes chr3R 13850446 intergenic not near genes chr3R_7_13850001 chr3R_13850001 RAL-406 2181 chr3R 13863686 13863715 chr3R 13863771 13863782 9 93 4.5 3.5 4.0 1.8 96 chr3R 13863686 intergenic not near genes chr3R 13863734 intergenic not near genes chr3R 13863782 intergenic not near genes chr3R_9_13860001 chr3R_13860001 RAL-406 2182 chr3R 13948214 13948250 chr3R 13948311 13948315 5 91 5.0 2.5 3.8 1.0 101 chr3R 13948214 intergenic CG31517 + chr3R 13948264 intergenic CG31517 + chr3R 13948315 intergenic CG31517 + chr3R_5_13945001 chr3R_13945001 RAL-406 2183 chr3R 13994513 13994542 chr3R 13994613 13994613 4 91 9.5 0.0 4.8 0.7 100 chr3R 13994513 intron rdx - chr3R 13994563 intron rdx - chr3R 13994613 intron rdx - chr3R_4_13990001 chr3R_13990001 RAL-406 2184 chr3R 14014276 14014286 chr3R 14014428 14014438 4 152 10.0 0.0 5.0 0.7 162 chr3R 14014276 intron rdx - chr3R 14014357 intron rdx - chr3R 14014438 intron rdx - chr3R_4_14010001 chr3R_14010001 RAL-406 2185 chr3R 14021630 14021641 chr3R 14023467 14023478 S-element 4 1837 15.5 8.5 12.0 0.3 1848 chr3R 14021630 intron rdx - chr3R 14022554 intron rdx - chr3R 14023478 intron rdx - chr3R_4_14020001 chr3R_14020001 RAL-406 2186 chr3R 14021645 14021677 chr3R 14023465 14023514 S-element 21 1834 7.5 8.5 8.0 2.3 1869 chr3R 14021645 intron rdx - chr3R 14022580 intron rdx - chr3R 14023514 intron rdx - chr3R_21_14020001 chr3R_14020001 RAL-406 2187 chr3R 14067125 14067154 chr3R 14067224 14067235 12 97 2.5 5.5 4.0 2.4 110 chr3R 14067125 exon foxo + chr3R 14067180 intron foxo + chr3R 14067235 intron foxo + chr3R_12_14065001 chr3R_14065001 RAL-406 2188 chr3R 14132415 14132450 chr3R 14132547 14132583 13 132 0.0 5.5 2.8 3.4 168 chr3R 14132415 intergenic CG14356 - chr3R 14132499 intergenic CG14356 - chr3R 14132583 intergenic not near genes chr3R_13_14130001 chr3R_14130001 RAL-406 2189 chr3R 14161444 14161459 chr3R 14161547 14161570 6 110 1.5 5.5 3.5 1.3 126 chr3R 14161444 intergenic not near genes chr3R 14161507 intergenic not near genes chr3R 14161570 intergenic not near genes chr3R_6_14160001 chr3R_14160001 RAL-406 2190 chr3R 14161460 14161486 chr3R 14161544 14161580 12 98 1.0 5.5 3.2 2.9 120 chr3R 14161460 intergenic not near genes chr3R 14161520 intergenic not near genes chr3R 14161580 intergenic not near genes chr3R_12_14160001 chr3R_14160001 RAL-406 2191 chr3R 14169730 14169745 chr3R 14169831 14169848 9 103 1.5 6.0 3.8 1.9 118 chr3R 14169730 3` UTR Dop1R1 - chr3R 14169789 3` UTR Dop1R1 - chr3R 14169848 3` UTR Dop1R1 - chr3R_9_14165001 chr3R_14165001 RAL-406 2192 chr3R 14169751 14169771 chr3R 14169824 14169874 12 100 1.5 5.5 3.5 2.7 123 chr3R 14169751 3` UTR Dop1R1 - chr3R 14169812 3` UTR Dop1R1 - chr3R 14169874 3` UTR Dop1R1 - chr3R_12_14165001 chr3R_14165001 RAL-406 2193 chr3R 14180794 14180807 chr3R 14185579 14185592 F-element 6 4783 12.5 0.5 6.5 0.8 4798 chr3R 14180794 intron Dop1R1 - chr3R 14183193 intron Dop1R1 - chr3R 14185592 intron Dop1R1 - chr3R_6_14180001 chr3R_14180001 RAL-406 2194 chr3R 14180808 14180841 chr3R 14185577 14185590 F-element 7 4770 8.0 0.5 4.2 1.3 4782 chr3R 14180808 intron Dop1R1 - chr3R 14183199 intron Dop1R1 - chr3R 14185590 intron Dop1R1 - chr3R_7_14180001 chr3R_14180001 RAL-406 2195 chr3R 14193714 14193723 chr3R 14193812 14193814 4 96 10.5 7.0 8.8 0.4 100 chr3R 14193714 intron Dop1R1 - chr3R 14193764 intron Dop1R1 - chr3R 14193814 intron Dop1R1 - chr3R_4_14190001 chr3R_14190001 RAL-406 2196 chr3R 14193724 14193759 chr3R 14193806 14193857 12 91 7.0 5.0 6.0 1.7 133 chr3R 14193724 intron Dop1R1 - chr3R 14193790 intron Dop1R1 - chr3R 14193857 intron Dop1R1 - chr3R_12_14190001 chr3R_14190001 RAL-406 2197 chr3R 14232336 14232387 chr3R 14232460 14232494 22 118 3.5 8.0 5.8 3.2 158 chr3R 14232336 intergenic not near genes chr3R 14232415 intergenic not near genes chr3R 14232494 intergenic not near genes chr3R_22_14230001 chr3R_14230001 RAL-406 2198 chr3R 14253684 14253721 chr3R 14253783 14253820 11 99 3.5 3.5 3.5 2.4 136 chr3R 14253684 intron Aats-met - chr3R 14253752 intron Aats-met - chr3R 14253820 intron Aats-met - chr3R_11_14250001 chr3R_14250001 RAL-406 2199 chr3R 14256759 14256766 chr3R 14256865 14256872 4 105 11.5 15.0 13.2 0.3 113 chr3R 14256759 intron,3` UTR Aats-met -,CG43179 + chr3R 14256816 intron,3` UTR Aats-met -,CG43179 + chr3R 14256872 intron,3` UTR Aats-met -,CG43179 + chr3R_4_14255001 chr3R_14255001 RAL-406 2200 chr3R 14313610 14313646 chr3R 14313721 14313750 12 107 5.5 6.0 5.8 1.8 140 chr3R 14313610 intron CG31321 + chr3R 14313680 intron CG31321 + chr3R 14313750 intron CG31321 + chr3R_12_14310001 chr3R_14310001 RAL-406 2201 chr3R 14384637 14384639 chr3R 14384706 14384732 5 86 0.0 0.5 0.2 4.2 95 chr3R 14384637 intergenic not near genes chr3R 14384684 intergenic not near genes chr3R 14384732 intergenic not near genes chr3R_5_14380001 chr3R_14380001 RAL-406 2202 chr3R 14469782 14469803 chr3R 14469878 14469899 4 96 5.0 5.0 5.0 0.7 117 chr3R 14469782 intron cv-c - chr3R 14469840 intron cv-c - chr3R 14469899 intron cv-c - chr3R_4_14465001 chr3R_14465001 RAL-406 2203 chr3R 14469804 14469828 chr3R 14469875 14469924 16 90 4.0 4.0 4.0 3.2 120 chr3R 14469804 intron cv-c - chr3R 14469864 intron cv-c - chr3R 14469924 intron cv-c - chr3R_16_14465001 chr3R_14465001 RAL-406 2204 chr3R 14478232 14478277 chr3R 14478339 14478352 8 101 7.0 9.5 8.2 0.9 120 chr3R 14478232 intron cv-c - chr3R 14478292 intron cv-c - chr3R 14478352 intron cv-c - chr3R_8_14475001 chr3R_14475001 RAL-406 2205 chr3R 14482369 14482417 chr3R 14482465 14482519 12 95 2.5 4.0 3.2 2.9 150 chr3R 14482369 intergenic not near genes chr3R 14482444 intergenic not near genes chr3R 14482519 intergenic not near genes chr3R_12_14480001 chr3R_14480001 RAL-406 2206 chr3R 14514456 14514511 chr3R 14514561 14514595 25 103 5.0 5.0 5.0 4.2 139 chr3R 14514456 3` UTR Pde6 - chr3R 14514526 3` UTR Pde6 - chr3R 14514595 3` UTR Pde6 - chr3R_25_14510001 chr3R_14510001 RAL-406 2207 chr3R 14533582 14533587 chr3R 14533690 14533695 6 108 0.5 12.5 6.5 0.8 113 chr3R 14533582 intron Pde6 - chr3R 14533638 intron Pde6 - chr3R 14533695 intron Pde6 - chr3R_6_14530001 chr3R_14530001 RAL-406 2208 chr3R 14560875 14560913 chr3R 14560989 14561027 11 113 3.5 2.5 3.0 2.8 152 chr3R 14560875 intergenic CG14850 + chr3R 14560951 5` UTR CG14850 + chr3R 14561027 exon CG14850 + chr3R_11_14560001 chr3R_14560001 RAL-406 2209 chr3R 14577938 14577986 chr3R 14578074 14578122 12 133 7.0 4.5 5.8 1.8 184 chr3R 14577938 intron stumps + chr3R 14578030 intron stumps + chr3R 14578122 intron stumps + chr3R_12_14575001 chr3R_14575001 RAL-406 2210 chr3R 14608450 14608477 chr3R 14608562 14608584 16 110 2.0 9.0 5.5 2.5 134 chr3R 14608450 intergenic stumps + chr3R 14608517 intergenic stumps + chr3R 14608584 intergenic not near genes chr3R_16_14605001 chr3R_14605001 RAL-406 2211 chr3R 14688104 14688152 chr3R 14688205 14688252 11 100 5.0 0.0 2.5 3.1 148 chr3R 14688104 intron Meltrin - chr3R 14688178 intron Meltrin - chr3R 14688252 intron Meltrin - chr3R_11_14685001 chr3R_14685001 RAL-406 2212 chr3R 14704399 14704414 chr3R 14704461 14704492 9 84 6.5 6.5 6.5 1.2 93 chr3R 14704399 intron kibra - chr3R 14704446 intron kibra - chr3R 14704492 intron kibra - chr3R_9_14700001 chr3R_14700001 RAL-406 2213 chr3R 14764553 14764575 chr3R 14764671 14764685 7 117 10.0 9.0 9.5 0.7 132 chr3R 14764553 intron jvl + chr3R 14764619 intron jvl + chr3R 14764685 intron jvl + chr3R_7_14760001 chr3R_14760001 RAL-406 2214 chr3R 14764579 14764590 chr3R 14764667 14764693 5 104 6.0 6.5 6.2 0.7 114 chr3R 14764579 intron jvl + chr3R 14764636 intron jvl + chr3R 14764693 intron jvl + chr3R_5_14760001 chr3R_14760001 RAL-406 2215 chr3R 14836688 14836730 chr3R 14836786 14836835 20 100 3.0 5.5 4.2 3.8 147 chr3R 14836688 intron btsz - chr3R 14836762 intron btsz - chr3R 14836835 intron btsz - chr3R_20_14835001 chr3R_14835001 RAL-406 2216 chr3R 14851256 14851307 chr3R 14851356 14851407 22 98 4.5 6.5 5.5 3.4 151 chr3R 14851256 intron btsz - chr3R 14851332 intron btsz - chr3R 14851407 intron btsz - chr3R_22_14850001 chr3R_14850001 RAL-406 2217 chr3R 14865200 14865251 chr3R 14865298 14865349 18 94 4.0 4.0 4.0 3.6 149 chr3R 14865200 intron btsz - chr3R 14865274 intron btsz - chr3R 14865349 intron btsz - chr3R_18_14865001 chr3R_14865001 RAL-406 2218 chr3R 14898454 14898502 chr3R 14898594 14898642 27 139 9.5 4.0 6.8 3.5 188 chr3R 14898454 intergenic Nup93-2 -,CG3817 + chr3R 14898548 intergenic Nup93-2 -,CG3817 + chr3R 14898642 intergenic CG3817 +,Nup93-2 - chr3R_27_14895001 chr3R_14895001 RAL-406 2219 chr3R 14927226 14927240 chr3R 14927344 14927358 5 115 10.5 3.0 6.8 0.6 132 chr3R 14927226 intergenic not near genes chr3R 14927292 intergenic not near genes chr3R 14927358 intergenic not near genes chr3R_5_14925001 chr3R_14925001 RAL-406 2220 chr3R 14927245 14927273 chr3R 14927343 14927391 11 115 5.5 3.0 4.2 2.1 146 chr3R 14927245 intergenic not near genes chr3R 14927318 intergenic not near genes chr3R 14927391 intergenic not near genes chr3R_11_14925001 chr3R_14925001 RAL-406 2221 chr3R 14952189 14952215 chr3R 14952359 14952375 10 165 4.5 5.5 5.0 1.7 186 chr3R 14952189 intergenic not near genes chr3R 14952282 intergenic not near genes chr3R 14952375 intergenic not near genes chr3R_10_14950001 chr3R_14950001 RAL-406 2222 chr3R 14952218 14952222 chr3R 14952343 14952357 4 147 3.5 3.5 3.5 0.9 139 chr3R 14952218 intergenic not near genes chr3R 14952288 intergenic not near genes chr3R 14952357 intergenic not near genes chr3R_4_14950001 chr3R_14950001 RAL-406 2223 chr3R 15026312 15026344 chr3R 15026418 15026437 15 103 5.5 3.0 4.2 2.9 125 chr3R 15026312 intergenic not near genes chr3R 15026374 intergenic not near genes chr3R 15026437 intergenic not near genes chr3R_15_15025001 chr3R_15025001 RAL-406 2224 chr3R 15032454 15032462 chr3R 15032561 15032569 5 107 0.0 8.0 4.0 1.0 115 chr3R 15032454 intergenic not near genes chr3R 15032512 intergenic not near genes chr3R 15032569 intergenic not near genes chr3R_5_15030001 chr3R_15030001 RAL-406 2225 chr3R 15041408 15041452 chr3R 15045196 15045240 Doc 13 3784 6.0 4.5 5.2 2.1 3832 chr3R 15041408 intergenic not near genes chr3R 15043324 intergenic not near genes chr3R 15045240 intergenic not near genes chr3R_13_15040001 chr3R_15040001 RAL-406 2226 chr3R 15059270 15059478 chr3R 15059473 15059570 BS 14 179 0.0 0.0 0.0 14.0 300 chr3R 15059270 intron dpr9 - chr3R 15059420 intron dpr9 - chr3R 15059570 intron dpr9 - chr3R_14_15055001 chr3R_15055001 RAL-406 2227 chr3R 15079788 15079827 chr3R 15080048 15080088 pogo 13 259 7.5 4.0 5.8 1.9 300 chr3R 15079788 3` UTR CG6966 - chr3R 15079938 3` UTR CG6966 - chr3R 15080088 3` UTR CG6966 - chr3R_13_15075001 chr3R_15075001 RAL-406 2228 chr3R 15102491 15102530 chr3R 15109769 15109804 412 17 7275 4.0 7.0 5.5 2.6 7313 chr3R 15102491 intron CG42788 - chr3R 15106148 intron CG42788 - chr3R 15109804 intron CG42788 - chr3R_17_15105001 chr3R_15105001 RAL-406 2229 chr3R 15114893 15114930 chr3R 15114990 15115015 10 95 11.5 9.5 10.5 0.9 122 chr3R 15114893 intron CG42788 - chr3R 15114954 intron CG42788 - chr3R 15115015 intron CG42788 - chr3R_10_15110001 chr3R_15110001 RAL-406 2230 chr3R 15119539 15119562 chr3R 15119625 15119643 4 86 2.5 5.0 3.8 0.8 104 chr3R 15119539 intron CG42788 - chr3R 15119591 intron CG42788 - chr3R 15119643 intron CG42788 - chr3R_4_15115001 chr3R_15115001 RAL-406 2231 chr3R 15127761 15127809 chr3R 15127861 15127909 30 100 7.5 8.0 7.8 3.4 148 chr3R 15127761 intron CG42788 - chr3R 15127835 intron CG42788 - chr3R 15127909 intron CG42788 - chr3R_30_15125001 chr3R_15125001 RAL-406 2232 chr3R 15132064 15132076 chr3R 15135114 15135149 Juan 6 3070 9.5 11.5 10.5 0.5 3085 chr3R 15132064 intergenic CG42788 - chr3R 15133606 intergenic not near genes chr3R 15135149 3` UTR CG6912 - chr3R_6_15130001 chr3R_15130001 RAL-406 2233 chr3R 15132077 15132078 chr3R 15135112 15135158 Juan 4 3052 8.5 10.5 9.5 0.4 3081 chr3R 15132077 intergenic CG42788 - chr3R 15133618 intergenic not near genes chr3R 15135158 3` UTR CG6912 - chr3R_4_15130001 chr3R_15130001 RAL-406 2234 chr3R 15162529 15162553 chr3R 15167311 15167326 F-element 6 4781 14.0 1.5 7.8 0.7 4797 chr3R 15162529 intron Gyc88E + chr3R 15164928 intron Gyc88E + chr3R 15167326 intron Gyc88E + chr3R_6_15160001 chr3R_15160001 RAL-406 2235 chr3R 15406129 15406168 chr3R 15406214 15406269 13 93 4.5 1.0 2.8 3.4 140 chr3R 15406129 intron CG6125 - chr3R 15406199 intron CG6125 - chr3R 15406269 intron CG6125 - chr3R_13_15405001 chr3R_15405001 RAL-406 2236 chr3R 15445890 15445899 chr3R 15445995 15446004 5 105 4.5 0.5 2.5 1.4 114 chr3R 15445890 exon AdamTS-A - chr3R 15445947 intron AdamTS-A - chr3R 15446004 intron AdamTS-A - chr3R_5_15445001 chr3R_15445001 RAL-406 2237 chr3R 15457637 15457667 chr3R 15457741 15457751 8 100 5.0 2.0 3.5 1.8 114 chr3R 15457637 intron AdamTS-A - chr3R 15457694 intron AdamTS-A - chr3R 15457751 intron AdamTS-A - chr3R_8_15455001 chr3R_15455001 RAL-406 2238 chr3R 15571266 15571498 chr3R 15571352 15571609 12 106 6.0 3.0 4.5 2.2 343 chr3R 15571266 intergenic not near genes chr3R 15571438 intergenic not near genes chr3R 15571609 intergenic not near genes chr3R_12_15570001 chr3R_15570001 RAL-406 2239 chr3R 15601162 15601177 chr3R 15608704 15608709 412 5 7539 8.0 11.0 9.5 0.5 7547 chr3R 15601162 intergenic not near genes chr3R 15604936 intergenic not near genes chr3R 15608709 intergenic not near genes chr3R_5_15600001 chr3R_15600001 RAL-406 2240 chr3R 15601183 15601196 chr3R 15608697 15608738 412 7 7530 4.0 8.0 6.0 1.0 7555 chr3R 15601183 intergenic not near genes chr3R 15604960 intergenic not near genes chr3R 15608738 intergenic not near genes chr3R_7_15600001 chr3R_15600001 RAL-406 2241 chr3R 15610553 15610592 chr3R 15610649 15610688 12 95 1.0 6.5 3.8 2.5 135 chr3R 15610553 intergenic not near genes chr3R 15610620 intergenic not near genes chr3R 15610688 intergenic not near genes chr3R_12_15610001 chr3R_15610001 RAL-406 2242 chr3R 15618743 15618764 chr3R 15626236 15626258 blood 5 7491 3.0 13.5 8.2 0.5 7515 chr3R 15618743 intergenic not near genes chr3R 15622500 intergenic not near genes chr3R 15626258 intergenic not near genes chr3R_5_15620001 chr3R_15620001 RAL-406 2243 chr3R 15639320 15639354 chr3R 15639624 15639643 6 297 3.0 7.0 5.0 1.0 323 chr3R 15639320 intergenic not near genes chr3R 15639482 intergenic not near genes chr3R 15639643 intergenic not near genes chr3R_6_15635001 chr3R_15635001 RAL-406 2244 chr3R 15677133 15677161 chr3R 15677476 15677505 16 350 5.5 6.0 5.8 2.4 372 chr3R 15677133 intron pxb + chr3R 15677319 intron pxb + chr3R 15677505 intron pxb + chr3R_16_15675001 chr3R_15675001 RAL-406 2245 chr3R 15691176 15691325 chr3R 15691291 15691432 20 108 0.5 0.5 0.5 13.3 256 chr3R 15691176 intergenic not near genes chr3R 15691304 intergenic not near genes chr3R 15691432 intergenic not near genes chr3R_20_15690001 chr3R_15690001 RAL-406 2246 chr3R 15734182 15734189 chr3R 15734287 15734294 4 107 3.0 3.5 3.2 1.0 112 chr3R 15734182 intergenic not near genes chr3R 15734238 intergenic not near genes chr3R 15734294 intergenic not near genes chr3R_4_15730001 chr3R_15730001 RAL-406 2247 chr3R 15734192 15734211 chr3R 15734267 15734297 4 96 1.5 1.0 1.2 1.8 105 chr3R 15734192 intergenic not near genes chr3R 15734244 intergenic not near genes chr3R 15734297 intergenic not near genes chr3R_4_15730001 chr3R_15730001 RAL-406 2248 chr3R 15735223 15735234 chr3R 15739963 15739974 F-element 5 4740 3.5 7.5 5.5 0.8 4751 chr3R 15735223 intergenic not near genes chr3R 15737598 intergenic not near genes chr3R 15739974 intergenic not near genes chr3R_5_15735001 chr3R_15735001 RAL-406 2249 chr3R 15817233 15817279 chr3R 15818255 15818301 16 1021 1.5 3.5 2.5 4.6 1068 chr3R 15817233 intron alpha-Man-IIb + chr3R 15817767 intron alpha-Man-IIb + chr3R 15818301 intron alpha-Man-IIb + chr3R_16_15815001 chr3R_15815001 RAL-406 2250 chr3R 15891652 15891684 chr3R 15892061 15892091 8 404 8.5 4.5 6.5 1.1 439 chr3R 15891652 intron CG14877 - chr3R 15891872 intron CG14877 - chr3R 15892091 intron CG14877 - chr3R_8_15890001 chr3R_15890001 RAL-406 2251 chr3R 15892637 15892681 chr3R 15892736 15892782 18 100 4.5 5.0 4.8 3.1 145 chr3R 15892637 intron CG14877 - chr3R 15892710 intron CG14877 - chr3R 15892782 intron CG14877 - chr3R_18_15890001 chr3R_15890001 RAL-406 2252 chr3R 16033405 16033431 chr3R 16033506 16033532 12 101 6.5 5.5 6.0 1.7 127 chr3R 16033405 intron pnr + chr3R 16033468 intron pnr + chr3R 16033532 intron pnr + chr3R_12_16030001 chr3R_16030001 RAL-406 2253 chr3R 16073423 16073475 chr3R 16073546 16073599 15 120 5.0 11.0 8.0 1.7 176 chr3R 16073423 intron Mhcl - chr3R 16073511 intron Mhcl - chr3R 16073599 intron Mhcl - chr3R_15_16070001 chr3R_16070001 RAL-406 2254 chr3R 16189391 16189437 chr3R 16189814 16189860 invader4 20 422 5.0 5.5 5.2 3.2 469 chr3R 16189391 intron sra + chr3R 16189626 intron sra + chr3R 16189860 intron sra + chr3R_20_16185001 chr3R_16185001 RAL-406 2255 chr3R 16253517 16253571 chr3R 16253623 16253676 9 105 0.0 5.0 2.5 2.6 159 chr3R 16253517 intron tara + chr3R 16253596 intron tara + chr3R 16253676 intron tara + chr3R_9_16250001 chr3R_16250001 RAL-406 2256 chr3R 16374280 16374327 chr3R 16374417 16374452 16 131 5.0 5.5 5.2 2.6 172 chr3R 16374280 intergenic ss - chr3R 16374366 intergenic ss - chr3R 16374452 3` UTR ss - chr3R_16_16370001 chr3R_16370001 RAL-406 2257 chr3R 16620365 16620399 chr3R 16620525 16620559 13 158 3.0 6.0 4.5 2.4 194 chr3R 16620365 intergenic CG14893 +,CG17560 + chr3R 16620462 intergenic CG14893 + chr3R 16620559 intergenic CG14893 + chr3R_13_16620001 chr3R_16620001 RAL-406 2258 chr3R 16731930 16731941 chr3R 16732018 16732041 4 97 1.5 5.5 3.5 0.9 111 chr3R 16731930 intron Ubx - chr3R 16731986 intron Ubx - chr3R 16732041 intron Ubx - chr3R_4_16730001 chr3R_16730001 RAL-406 2259 chr3R 16756306 16756334 chr3R 16762511 16762536 diver 7 6204 3.5 1.5 2.5 2.0 6230 chr3R 16756306 intron bxd - chr3R 16759421 intron bxd - chr3R 16762536 intron bxd - chr3R_7_16755001 chr3R_16755001 RAL-406 2260 chr3R 16779434 16779467 chr3R 16779526 16779563 15 94 4.0 3.0 3.5 3.3 129 chr3R 16779434 intergenic not near genes chr3R 16779498 intergenic not near genes chr3R 16779563 intergenic not near genes chr3R_15_16775001 chr3R_16775001 RAL-406 2261 chr3R 16820234 16820279 chr3R 16820348 16820383 18 112 7.5 3.5 5.5 2.8 149 chr3R 16820234 intron abd-A - chr3R 16820308 intron abd-A - chr3R 16820383 intron abd-A - chr3R_18_16820001 chr3R_16820001 RAL-406 2262 chr3R 17002526 17002575 chr3R 17002635 17002684 11 101 6.0 6.0 6.0 1.6 158 chr3R 17002526 intergenic CG16941 -,Irc + chr3R 17002605 intergenic CG16941 -,Irc + chr3R 17002684 intergenic Irc +,CG16941 - chr3R_11_17000001 chr3R_17000001 RAL-406 2263 chr3R 17007608 17007656 chr3R 17007841 17007880 20 231 3.5 5.5 4.5 3.6 272 chr3R 17007608 intergenic Irc + chr3R 17007744 intergenic not near genes chr3R 17007880 intergenic CG8907 + chr3R_20_17005001 chr3R_17005001 RAL-406 2264 chr3R 17015343 17015395 chr3R 17015538 17015590 9 194 3.0 5.0 4.0 1.8 247 chr3R 17015343 intron Pxd + chr3R 17015466 intron Pxd + chr3R 17015590 intron Pxd + chr3R_9_17015001 chr3R_17015001 RAL-406 2265 chr3R 17067491 17067536 chr3R 17067589 17067639 12 98 7.0 6.5 6.8 1.5 148 chr3R 17067491 intron Dad + chr3R 17067565 intron Dad + chr3R 17067639 intron Dad + chr3R_12_17065001 chr3R_17065001 RAL-406 2266 chr3R 17147938 17147942 chr3R 17148026 17148042 4 97 4.0 0.0 2.0 1.3 104 chr3R 17147938 intron m-cup - chr3R 17147990 intron m-cup - chr3R 17148042 intron m-cup - chr3R_4_17145001 chr3R_17145001 RAL-406 2267 chr3R 17184720 17184729 chr3R 17184816 17184825 7 96 13.5 7.5 10.5 0.6 105 chr3R 17184720 intron Mur89F - chr3R 17184772 intron Mur89F - chr3R 17184825 intron Mur89F - chr3R_7_17180001 chr3R_17180001 RAL-406 2268 chr3R 17184730 17184757 chr3R 17184814 17184853 12 94 6.0 5.5 5.8 1.8 123 chr3R 17184730 intron Mur89F - chr3R 17184792 intron Mur89F - chr3R 17184853 intron Mur89F - chr3R_12_17180001 chr3R_17180001 RAL-406 2269 chr3R 17209691 17209707 chr3R 17209799 17209800 7 105 9.5 17.5 13.5 0.5 109 chr3R 17209691 intergenic not near genes chr3R 17209746 intergenic not near genes chr3R 17209800 intergenic not near genes chr3R_7_17205001 chr3R_17205001 RAL-406 2270 chr3R 17244857 17244868 chr3R 17244993 17245007 5 140 3.5 10.0 6.8 0.6 150 chr3R 17244857 intron beat-IIb - chr3R 17244932 intron beat-IIb - chr3R 17245007 intron beat-IIb - chr3R_5_17240001 chr3R_17240001 RAL-406 2271 chr3R 17268664 17268680 chr3R 17268806 17268820 4 140 10.0 5.0 7.5 0.5 156 chr3R 17268664 intergenic not near genes chr3R 17268742 intergenic not near genes chr3R 17268820 intergenic not near genes chr3R_4_17265001 chr3R_17265001 RAL-406 2272 chr3R 17268681 17268703 chr3R 17268799 17268845 7 134 5.5 5.0 5.2 1.1 164 chr3R 17268681 intergenic not near genes chr3R 17268763 intergenic not near genes chr3R 17268845 intergenic not near genes chr3R_7_17265001 chr3R_17265001 RAL-406 2273 chr3R 17273952 17274000 chr3R 17274079 17274127 29 125 3.5 3.5 3.5 6.4 175 chr3R 17273952 intergenic not near genes chr3R 17274040 intergenic not near genes chr3R 17274127 intergenic not near genes chr3R_29_17270001 chr3R_17270001 RAL-406 2274 chr3R 17290425 17290473 chr3R 17290530 17290579 18 102 5.0 2.5 3.8 3.8 154 chr3R 17290425 intergenic not near genes chr3R 17290502 intergenic not near genes chr3R 17290579 intergenic not near genes chr3R_18_17290001 chr3R_17290001 RAL-406 2275 chr3R 17294384 17294434 chr3R 17294479 17294486 5 86 2.0 1.0 1.5 2.0 102 chr3R 17294384 intergenic not near genes chr3R 17294435 intergenic not near genes chr3R 17294486 intergenic not near genes chr3R_5_17290001 chr3R_17290001 RAL-406 2276 chr3R 17294656 17294703 chr3R 17295100 17295123 BS 11 445 1.0 3.5 2.2 3.4 467 chr3R 17294656 intergenic not near genes chr3R 17294890 intergenic not near genes chr3R 17295123 intergenic not near genes chr3R_11_17290001 chr3R_17290001 RAL-406 2277 chr3R 17346683 17346715 chr3R 17348253 17348298 F-element 13 1579 3.0 3.5 3.2 3.1 1615 chr3R 17346683 intron beat-IIa - chr3R 17347490 intron beat-IIa - chr3R 17348298 intron beat-IIa - chr3R_13_17345001 chr3R_17345001 RAL-406 2278 chr3R 17355493 17355521 chr3R 17355568 17355614 5 80 8.0 5.0 6.5 0.7 121 chr3R 17355493 intron beat-IIa - chr3R 17355554 intron beat-IIa - chr3R 17355614 intron beat-IIa - chr3R_5_17355001 chr3R_17355001 RAL-406 2279 chr3R 17406986 17407026 chr3R 17407108 17407148 12 122 4.5 4.0 4.2 2.3 162 chr3R 17406986 intron CG42798 + chr3R 17407067 5` UTR CG42798 + chr3R 17407148 exon CG42798 + chr3R_12_17405001 chr3R_17405001 RAL-406 2280 chr3R 17458214 17458264 chr3R 17458335 17458385 15 118 4.0 8.0 6.0 2.1 171 chr3R 17458214 intergenic not near genes chr3R 17458300 intergenic not near genes chr3R 17458385 intergenic not near genes chr3R_15_17455001 chr3R_17455001 RAL-406 2281 chr3R 17461180 17461229 chr3R 17461282 17461331 19 100 4.5 4.0 4.2 3.7 151 chr3R 17461180 intergenic not near genes chr3R 17461256 intergenic not near genes chr3R 17461331 intergenic not near genes chr3R_19_17460001 chr3R_17460001 RAL-406 2282 chr3R 17497934 17497993 chr3R 17498060 17498099 11 122 0.0 9.0 4.5 2.0 165 chr3R 17497934 intron Dscam3 - chr3R 17498016 intron Dscam3 - chr3R 17498099 intron Dscam3 - chr3R_11_17495001 chr3R_17495001 RAL-406 2283 chr3R 17521583 17521589 chr3R 17521726 17521734 5 158 0.5 2.0 1.2 2.3 151 chr3R 17521583 intergenic not near genes chr3R 17521658 intergenic not near genes chr3R 17521734 intergenic not near genes chr3R_5_17520001 chr3R_17520001 RAL-406 2284 chr3R 17522195 17522245 chr3R 17522308 17522309 10 94 2.5 1.0 1.8 3.6 114 chr3R 17522195 intergenic not near genes chr3R 17522252 intergenic not near genes chr3R 17522309 intergenic not near genes chr3R_10_17520001 chr3R_17520001 RAL-406 2285 chr3R 17588407 17588446 chr3R 17588505 17588533 5 96 5.5 1.0 3.2 1.2 126 chr3R 17588407 intergenic not near genes chr3R 17588470 intergenic not near genes chr3R 17588533 intergenic not near genes chr3R_5_17585001 chr3R_17585001 RAL-406 2286 chr3R 17647228 17647273 chr3R 17647345 17647385 24 113 5.5 9.0 7.2 2.9 157 chr3R 17647228 intergenic CG14322 + chr3R 17647306 intergenic CG14322 + chr3R 17647385 intergenic CG14322 + chr3R_24_17645001 chr3R_17645001 RAL-406 2287 chr3R 17655446 17655479 chr3R 17655551 17655594 5 113 2.0 7.0 4.5 0.9 148 chr3R 17655446 intron CG14322 + chr3R 17655520 intron CG14322 + chr3R 17655594 intron CG14322 + chr3R_5_17655001 chr3R_17655001 RAL-406 2288 chr3R 17678880 17678912 chr3R 17678980 17679001 4 95 16.5 15.0 15.8 0.2 121 chr3R 17678880 intron alt - chr3R 17678940 intron alt - chr3R 17679001 intron alt - chr3R_4_17675001 chr3R_17675001 RAL-406 2289 chr3R 17725052 17725081 chr3R 17725166 17725179 16 112 4.5 0.0 2.2 5.0 127 chr3R 17725052 intergenic Atg8b - chr3R 17725116 intergenic Atg8b - chr3R 17725179 intergenic Atg8b - chr3R_16_17725001 chr3R_17725001 RAL-406 2290 chr3R 17734112 17734128 chr3R 17734221 17734237 4 109 1.0 2.5 1.8 1.4 125 chr3R 17734112 3` UTR CG14321 + chr3R 17734174 3` UTR CG14321 + chr3R 17734237 3` UTR CG14321 + chr3R_4_17730001 chr3R_17730001 RAL-406 2291 chr3R 17734822 17734859 chr3R 17734956 17734983 12 133 8.0 7.0 7.5 1.4 161 chr3R 17734822 intergenic CG14321 + chr3R 17734902 intergenic not near genes chr3R 17734983 intergenic not near genes chr3R_12_17730001 chr3R_17730001 RAL-406 2292 chr3R 17773373 17773389 chr3R 17773473 17773489 5 99 4.0 3.0 3.5 1.1 116 chr3R 17773373 intron CG43102 - chr3R 17773431 intron CG43102 - chr3R 17773489 exon CG43102 - chr3R_5_17770001 chr3R_17770001 RAL-406 2293 chr3R 17823196 17823221 chr3R 17823296 17823326 9 103 10.5 4.0 7.2 1.1 130 chr3R 17823196 intron tinc + chr3R 17823261 intron tinc + chr3R 17823326 intron tinc + chr3R_9_17820001 chr3R_17820001 RAL-406 2294 chr3R 17858365 17858411 chr3R 17858470 17858497 13 102 4.0 0.0 2.0 4.3 132 chr3R 17858365 intron tinc + chr3R 17858431 intron tinc + chr3R 17858497 intron tinc + chr3R_13_17855001 chr3R_17855001 RAL-406 2295 chr3R 17899070 17899091 chr3R 17899168 17899180 10 97 11.5 12.0 11.8 0.8 110 chr3R 17899070 intron Rim - chr3R 17899125 intron Rim - chr3R 17899180 intron Rim - chr3R_10_17895001 chr3R_17895001 RAL-406 2296 chr3R 17925865 17925888 chr3R 17927321 17927364 hobo 4 1466 2.5 4.0 3.2 1.0 1499 chr3R 17925865 intron cpo + chr3R 17926614 intron cpo + chr3R 17927364 intron cpo + chr3R_4_17925001 chr3R_17925001 RAL-406 2297 chr3R 17955880 17955884 chr3R 17955999 17956003 5 119 0.0 9.5 4.8 0.9 123 chr3R 17955880 intron cpo + chr3R 17955942 intron cpo + chr3R 17956003 intron cpo + chr3R_5_17955001 chr3R_17955001 RAL-406 2298 chr3R 18041744 18041758 chr3R 18041841 18041852 4 96 6.0 0.0 3.0 1.0 108 chr3R 18041744 intergenic not near genes chr3R 18041798 intergenic not near genes chr3R 18041852 intergenic not near genes chr3R_4_18040001 chr3R_18040001 RAL-406 2299 chr3R 18041759 18041771 chr3R 18041830 18041848 8 88 3.0 0.0 1.5 3.2 89 chr3R 18041759 intergenic not near genes chr3R 18041804 intergenic not near genes chr3R 18041848 intergenic not near genes chr3R_8_18040001 chr3R_18040001 RAL-406 2300 chr3R 18061569 18061611 chr3R 18063157 18063189 F-element 17 1586 8.5 6.0 7.2 2.1 1620 chr3R 18061569 intergenic not near genes chr3R 18062379 intergenic not near genes chr3R 18063189 intergenic not near genes chr3R_17_18060001 chr3R_18060001 RAL-406 2301 chr3R 18067957 18068020 chr3R 18068073 18068083 13 103 0.5 7.0 3.8 2.7 126 chr3R 18067957 intergenic not near genes chr3R 18068020 intergenic not near genes chr3R 18068083 intergenic not near genes chr3R_13_18065001 chr3R_18065001 RAL-406 2302 chr3R 18117398 18117438 chr3R 18117494 18117534 5 95 4.5 13.5 9.0 0.5 136 chr3R 18117398 intron sr + chr3R 18117466 intron sr + chr3R 18117534 intron sr + chr3R_5_18115001 chr3R_18115001 RAL-406 2303 chr3R 18122879 18122916 chr3R 18122976 18123013 6 97 6.5 6.0 6.2 0.8 134 chr3R 18122879 intron sr + chr3R 18122946 intron sr + chr3R 18123013 intron sr + chr3R_6_18120001 chr3R_18120001 RAL-406 2304 chr3R 18331762 18331799 chr3R 18333276 18333283 hopper2 6 1507 12.0 1.0 6.5 0.8 1521 chr3R 18331762 3` UTR CG15803 - chr3R 18332522 intron CG15803 - chr3R 18333283 3` UTR CG15803 - chr3R_6_18330001 chr3R_18330001 RAL-406 2305 chr3R 18342004 18342044 chr3R 18342102 18342142 8 89 1.0 4.5 2.8 2.1 138 chr3R 18342004 intron CG15803 - chr3R 18342073 intron CG15803 - chr3R 18342142 intron CG15803 - chr3R_8_18340001 chr3R_18340001 RAL-406 2306 chr3R 18464329 18464339 chr3R 18464488 18464498 4 159 0.5 18.5 9.5 0.4 169 chr3R 18464329 intron fru - chr3R 18464414 intron fru - chr3R 18464498 intron fru - chr3R_4_18460001 chr3R_18460001 RAL-406 2307 chr3R 18498172 18498187 chr3R 18498268 18498283 7 95 2.0 7.0 4.5 1.3 111 chr3R 18498172 intron fru - chr3R 18498228 intron fru - chr3R 18498283 intron fru - chr3R_7_18495001 chr3R_18495001 RAL-406 2308 chr3R 18501582 18501624 chr3R 18501673 18501725 28 98 2.5 5.0 3.8 5.8 143 chr3R 18501582 intron fru - chr3R 18501654 intron fru - chr3R 18501725 intron fru - chr3R_28_18500001 chr3R_18500001 RAL-406 2309 chr3R 18541523 18541550 chr3R 18541619 18541646 10 95 11.0 10.0 10.5 0.9 123 chr3R 18541523 intron fru - chr3R 18541584 intron fru - chr3R 18541646 intron fru - chr3R_10_18540001 chr3R_18540001 RAL-406 2310 chr3R 18562550 18562589 chr3R 18562689 18562729 14 139 5.0 8.0 6.5 1.9 179 chr3R 18562550 intergenic not near genes chr3R 18562640 intergenic not near genes chr3R 18562729 intergenic not near genes chr3R_14_18560001 chr3R_18560001 RAL-406 2311 chr3R 18606490 18606531 chr3R 18610738 18610774 F-element 19 4249 4.5 10.5 7.5 2.2 4284 chr3R 18606490 intron,intron qin +,CG14304 - chr3R 18608632 intron,intron qin +,CG14304 - chr3R 18610774 intron,intron qin +,CG14304 - chr3R_19_18605001 chr3R_18605001 RAL-406 2312 chr3R 18669867 18669891 chr3R 18669986 18670031 10 136 3.0 5.0 4.0 2.0 164 chr3R 18669867 intron CG7702 + chr3R 18669949 intron CG7702 + chr3R 18670031 intron CG7702 + chr3R_10_18665001 chr3R_18665001 RAL-406 2313 chr3R 18695744 18695759 chr3R 18695848 18695851 7 102 4.0 0.0 2.0 2.3 107 chr3R 18695744 3` UTR CG34282 + chr3R 18695798 intergenic CG34282 + chr3R 18695851 intergenic CG34282 + chr3R_7_18695001 chr3R_18695001 RAL-406 2314 chr3R 18766759 18766807 chr3R 18766856 18766905 20 93 4.0 5.5 4.8 3.4 146 chr3R 18766759 intron CG7720 - chr3R 18766832 intron CG7720 - chr3R 18766905 intron CG7720 - chr3R_20_18765001 chr3R_18765001 RAL-406 2315 chr3R 18770279 18770321 chr3R 18770381 18770423 19 101 4.0 4.0 4.0 3.8 144 chr3R 18770279 intron CG7720 - chr3R 18770351 intron CG7720 - chr3R 18770423 intron CG7720 - chr3R_19_18770001 chr3R_18770001 RAL-406 2316 chr3R 18784892 18784929 chr3R 18785006 18785043 11 112 8.0 5.0 6.5 1.5 151 chr3R 18784892 intron CG7720 - chr3R 18784968 intron CG7720 - chr3R 18785043 intron CG7720 - chr3R_11_18780001 chr3R_18780001 RAL-406 2317 chr3R 18792799 18792830 chr3R 18792887 18792933 5 97 8.5 0.0 4.2 1.0 134 chr3R 18792799 intron CG7720 - chr3R 18792866 intron CG7720 - chr3R 18792933 intron CG7720 - chr3R_5_18790001 chr3R_18790001 RAL-406 2318 chr3R 18807310 18807332 chr3R 18807407 18807429 11 97 2.5 0.0 1.2 5.0 119 chr3R 18807310 intron CG18208 - chr3R 18807370 intron CG18208 - chr3R 18807429 intron CG18208 - chr3R_11_18805001 chr3R_18805001 RAL-406 2319 chr3R 18812076 18812107 chr3R 18812152 18812205 10 92 6.0 4.0 5.0 1.7 129 chr3R 18812076 intron CG18208 - chr3R 18812140 intron CG18208 - chr3R 18812205 intron CG18208 - chr3R_10_18810001 chr3R_18810001 RAL-406 2320 chr3R 18817487 18817536 chr3R 18817605 18817654 12 117 0.0 0.0 0.0 12.0 167 chr3R 18817487 intron CG18208 - chr3R 18817570 intron CG18208 - chr3R 18817654 intron CG18208 - chr3R_12_18815001 chr3R_18815001 RAL-406 2321 chr3R 18885922 18885961 chr3R 18886012 18886032 9 86 3.5 0.5 2.0 3.0 110 chr3R 18885922 intergenic not near genes chr3R 18885977 intergenic not near genes chr3R 18886032 intergenic not near genes chr3R_9_18885001 chr3R_18885001 RAL-406 2322 chr3R 19106821 19106838 chr3R 19106914 19106914 5 86 6.0 0.0 3.0 1.2 93 chr3R 19106821 intron CG6040 + chr3R 19106868 intron CG6040 + chr3R 19106914 intron CG6040 + chr3R_5_19105001 chr3R_19105001 RAL-406 2323 chr3R 19136407 19136424 chr3R 19139775 19139810 Bari1 18 3373 47.5 50.0 48.8 0.4 3403 chr3R 19136407 exon Cyp12a4 + chr3R 19138108 intergenic not near genes chr3R 19139810 3` UTR Ppcs - chr3R_18_19135001 chr3R_19135001 RAL-406 2324 chr3R 19140281 19140295 chr3R 19140714 19140743 5 442 2.0 2.0 2.0 1.7 462 chr3R 19140281 3` UTR Ppcs - chr3R 19140512 3` UTR Ppcs - chr3R 19140743 3` UTR Ppcs - chr3R_5_19140001 chr3R_19140001 RAL-406 2325 chr3R 19276910 19276947 chr3R 19277010 19277047 12 100 5.0 2.5 3.8 2.5 137 chr3R 19276910 intergenic not near genes chr3R 19276978 intergenic not near genes chr3R 19277047 intergenic not near genes chr3R_12_19275001 chr3R_19275001 RAL-406 2326 chr3R 19290907 19290912 chr3R 19291010 19291015 4 103 7.0 6.0 6.5 0.5 108 chr3R 19290907 intergenic not near genes chr3R 19290961 intergenic not near genes chr3R 19291015 intergenic not near genes chr3R_4_19290001 chr3R_19290001 RAL-406 2327 chr3R 19344645 19344697 chr3R 19344800 19344852 10 154 3.0 6.0 4.5 1.8 207 chr3R 19344645 intergenic not near genes chr3R 19344748 intergenic not near genes chr3R 19344852 intergenic not near genes chr3R_10_19340001 chr3R_19340001 RAL-406 2328 chr3R 19542860 19542901 chr3R 19543002 19543049 16 142 4.5 4.5 4.5 2.9 189 chr3R 19542860 intron Dys + chr3R 19542954 intron Dys + chr3R 19543049 intron Dys + chr3R_16_19540001 chr3R_19540001 RAL-406 2329 chr3R 19598717 19598758 chr3R 19598819 19598860 16 100 5.0 5.0 5.0 2.7 143 chr3R 19598717 intron Cpr92A - chr3R 19598788 intron Cpr92A - chr3R 19598860 5` UTR Cpr92A - chr3R_16_19595001 chr3R_19595001 RAL-406 2330 chr3R 19633274 19633294 chr3R 19633376 19633389 8 101 11.5 7.0 9.2 0.8 115 chr3R 19633274 intergenic subdued - chr3R 19633332 intergenic subdued - chr3R 19633389 intergenic subdued - chr3R_8_19630001 chr3R_19630001 RAL-406 2331 chr3R 19633296 19633325 chr3R 19633373 19633427 12 98 7.0 6.5 6.8 1.5 131 chr3R 19633296 intergenic subdued - chr3R 19633362 intergenic subdued - chr3R 19633427 3` UTR subdued - chr3R_12_19630001 chr3R_19630001 RAL-406 2332 chr3R 19702302 19702352 chr3R 19702404 19702454 13 96 8.0 5.5 6.8 1.7 152 chr3R 19702302 intergenic not near genes chr3R 19702378 intergenic not near genes chr3R 19702454 intergenic not near genes chr3R_13_19700001 chr3R_19700001 RAL-406 2333 chr3R 19717681 19717720 chr3R 19717775 19717817 6 95 1.5 5.0 3.2 1.4 136 chr3R 19717681 intergenic not near genes chr3R 19717749 intergenic not near genes chr3R 19717817 intergenic not near genes chr3R_6_19715001 chr3R_19715001 RAL-406 2334 chr3R 19735707 19735732 chr3R 19735817 19735843 6 118 3.0 5.5 4.2 1.2 136 chr3R 19735707 intron GluClalpha + chr3R 19735775 intron GluClalpha + chr3R 19735843 intron GluClalpha + chr3R_6_19735001 chr3R_19735001 RAL-406 2335 chr3R 19793879 19793918 chr3R 19793992 19794031 13 111 3.5 3.5 3.5 2.9 152 chr3R 19793879 intergenic bnl - chr3R 19793955 intergenic bnl - chr3R 19794031 intergenic bnl - chr3R_13_19790001 chr3R_19790001 RAL-406 2336 chr3R 19824491 19824519 chr3R 19824605 19824633 17 114 9.5 7.5 8.5 1.8 142 chr3R 19824491 intron bnl - chr3R 19824562 intron bnl - chr3R 19824633 intron bnl - chr3R_17_19820001 chr3R_19820001 RAL-406 2337 chr3R 19824520 19824543 chr3R 19824598 19824645 14 108 3.5 6.0 4.8 2.4 125 chr3R 19824520 intron bnl - chr3R 19824582 intron bnl - chr3R 19824645 intron bnl - chr3R_14_19820001 chr3R_19820001 RAL-406 2338 chr3R 19827505 19827555 chr3R 19827611 19827661 17 105 4.5 2.5 3.5 3.8 156 chr3R 19827505 intron bnl - chr3R 19827583 intron bnl - chr3R 19827661 exon bnl - chr3R_17_19825001 chr3R_19825001 RAL-406 2339 chr3R 19908300 19908305 chr3R 19908374 19908382 4 90 0.0 3.0 1.5 1.6 82 chr3R 19908300 intron RhoGAP92B + chr3R 19908341 intron RhoGAP92B + chr3R 19908382 intron RhoGAP92B + chr3R_4_19905001 chr3R_19905001 RAL-406 2340 chr3R 19943871 19944121 chr3R 19943960 19944258 10 87 12.5 0.0 6.2 1.4 387 chr3R 19943871 intron Hs6st - chr3R 19944064 intron Hs6st - chr3R 19944258 intron Hs6st - chr3R_10_19940001 chr3R_19940001 RAL-406 2341 chr3R 19944125 19944166 chr3R 19944262 19944305 6 132 5.0 0.5 2.8 1.6 180 chr3R 19944125 intron Hs6st - chr3R 19944215 intron Hs6st - chr3R 19944305 intron Hs6st - chr3R_6_19940001 chr3R_19940001 RAL-406 2342 chr3R 19948407 19948431 chr3R 19948481 19948528 9 87 3.0 3.5 3.2 2.1 121 chr3R 19948407 intron Hs6st - chr3R 19948468 intron,5` UTR Hs6st -,CG4783 + chr3R 19948528 intron,exon Hs6st -,CG4783 + chr3R_9_19945001 chr3R_19945001 RAL-406 2343 chr3R 19953932 19953981 chr3R 19954029 19954072 6 95 2.0 5.5 3.8 1.2 140 chr3R 19953932 intron Hs6st - chr3R 19954002 intron Hs6st - chr3R 19954072 intron Hs6st - chr3R_6_19950001 chr3R_19950001 RAL-406 2344 chr3R 20020136 20020152 chr3R 20020295 20020308 5 159 16.5 3.5 10.0 0.5 172 chr3R 20020136 intron CG4433 - chr3R 20020222 intron CG4433 - chr3R 20020308 intron CG4433 - chr3R_5_20020001 chr3R_20020001 RAL-406 2345 chr3R 20020155 20020181 chr3R 20020293 20020343 5 140 7.0 2.5 4.8 0.9 188 chr3R 20020155 intron CG4433 - chr3R 20020249 intron CG4433 - chr3R 20020343 intron CG4433 - chr3R_5_20020001 chr3R_20020001 RAL-406 2346 chr3R 20109516 20109565 chr3R 20114742 20114781 copia 19 5224 7.0 5.5 6.2 2.6 5265 chr3R 20109516 intergenic not near genes chr3R 20112148 intergenic not near genes chr3R 20114781 intergenic CG10887 + chr3R_19_20110001 chr3R_20110001 RAL-406 2347 chr3R 20155042 20155094 chr3R 20155190 20155235 8 139 3.5 2.0 2.8 2.1 193 chr3R 20155042 intergenic not near genes chr3R 20155138 intergenic not near genes chr3R 20155235 intergenic not near genes chr3R_8_20155001 chr3R_20155001 RAL-406 2348 chr3R 20156695 20156719 chr3R 20165864 20165903 roo 11 9179 3.5 5.5 4.5 2.0 9208 chr3R 20156695 intergenic not near genes chr3R 20161299 intergenic not near genes chr3R 20165903 intergenic not near genes chr3R_11_20160001 chr3R_20160001 RAL-406 2349 chr3R 20201342 20201388 chr3R 20201441 20201474 9 100 4.0 3.0 3.5 2.0 132 chr3R 20201342 intergenic not near genes chr3R 20201408 intergenic not near genes chr3R 20201474 intergenic not near genes chr3R_9_20200001 chr3R_20200001 RAL-406 2350 chr3R 20222244 20222262 chr3R 20222347 20222360 6 99 7.0 8.0 7.5 0.7 116 chr3R 20222244 intron Nlg4 + chr3R 20222302 intron Nlg4 + chr3R 20222360 intron Nlg4 + chr3R_6_20220001 chr3R_20220001 RAL-406 2351 chr3R 20222265 20222282 chr3R 20222344 20222385 8 84 3.5 6.5 5.0 1.3 120 chr3R 20222265 intron Nlg4 + chr3R 20222325 intron Nlg4 + chr3R 20222385 intron Nlg4 + chr3R_8_20220001 chr3R_20220001 RAL-406 2352 chr3R 20230302 20230350 chr3R 20230402 20230453 9 101 3.5 0.0 1.8 3.2 151 chr3R 20230302 intron Nlg4 + chr3R 20230378 intron Nlg4 + chr3R 20230453 intron Nlg4 + chr3R_9_20230001 chr3R_20230001 RAL-406 2353 chr3R 20245273 20245278 chr3R 20248904 20248909 F-element 5 3631 11.5 9.0 10.2 0.4 3636 chr3R 20245273 3` UTR Nlg4 + chr3R 20247091 intergenic not near genes chr3R 20248909 intergenic not near genes chr3R_5_20245001 chr3R_20245001 RAL-406 2354 chr3R 20245280 20245303 chr3R 20248891 20248904 F-element 7 3622 6.5 7.5 7.0 0.9 3624 chr3R 20245280 3` UTR Nlg4 + chr3R 20247092 intergenic not near genes chr3R 20248904 intergenic not near genes chr3R_7_20245001 chr3R_20245001 RAL-406 2355 chr3R 20266502 20266543 chr3R 20272988 20273033 Burdock 15 6484 6.0 5.0 5.5 2.3 6531 chr3R 20266502 intron cic + chr3R 20269768 intron cic + chr3R 20273033 intron cic + chr3R_15_20265001 chr3R_20265001 RAL-406 2356 chr3R 20312834 20312886 chr3R 20312940 20312992 20 105 4.0 3.5 3.8 4.2 158 chr3R 20312834 intron CG42668 + chr3R 20312913 intron CG42668 + chr3R 20312992 intron CG42668 + chr3R_20_20310001 chr3R_20310001 RAL-406 2357 chr3R 20330978 20331029 chr3R 20331484 20331535 roo 24 505 5.0 5.5 5.2 3.9 557 chr3R 20330978 intergenic Sirt2 + chr3R 20331256 intergenic Sirt2 + chr3R 20331535 intergenic not near genes chr3R_24_20330001 chr3R_20330001 RAL-406 2358 chr3R 20406483 20406496 chr3R 20406602 20406615 7 118 8.5 2.0 5.2 1.1 132 chr3R 20406483 intron Gfrl - chr3R 20406549 intron Gfrl - chr3R 20406615 intron,3` UTR Gfrl -,CG4335 - chr3R_7_20405001 chr3R_20405001 RAL-406 2359 chr3R 20406507 20406518 chr3R 20406593 20406637 7 102 4.0 1.5 2.8 1.8 130 chr3R 20406507 intron Gfrl - chr3R 20406572 intron Gfrl - chr3R 20406637 intron,3` UTR Gfrl -,CG4335 - chr3R_7_20405001 chr3R_20405001 RAL-406 2360 chr3R 20434828 20434865 chr3R 20435032 20435070 13 204 3.5 7.0 5.2 2.1 242 chr3R 20434828 intron Gfrl - chr3R 20434949 intron Gfrl - chr3R 20435070 intron Gfrl - chr3R_13_20430001 chr3R_20430001 RAL-406 2361 chr3R 20450135 20450144 chr3R 20450240 20450249 6 105 0.0 2.5 1.2 2.7 114 chr3R 20450135 intron Gfrl - chr3R 20450192 intron Gfrl - chr3R 20450249 intron Gfrl - chr3R_6_20450001 chr3R_20450001 RAL-406 2362 chr3R 20492408 20492438 chr3R 20492586 20492611 8 174 6.0 2.5 4.2 1.5 203 chr3R 20492408 intergenic not near genes chr3R 20492510 intergenic not near genes chr3R 20492611 intergenic not near genes chr3R_8_20490001 chr3R_20490001 RAL-406 2363 chr3R 20492439 20492455 chr3R 20492585 20492633 6 164 4.0 2.5 3.2 1.4 194 chr3R 20492439 intergenic not near genes chr3R 20492536 intergenic not near genes chr3R 20492633 intergenic not near genes chr3R_6_20490001 chr3R_20490001 RAL-406 2364 chr3R 20494382 20494426 chr3R 20494484 20494501 9 90 7.0 6.5 6.8 1.2 119 chr3R 20494382 intergenic not near genes chr3R 20494442 intergenic not near genes chr3R 20494501 intergenic not near genes chr3R_9_20490001 chr3R_20490001 RAL-406 2365 chr3R 20506602 20506616 chr3R 20507400 20507412 BS 4 810 6.5 10.0 8.2 0.4 810 chr3R 20506602 intergenic Or92a + chr3R 20507007 intergenic CG4288 - chr3R 20507412 3` UTR CG4288 - chr3R_4_20505001 chr3R_20505001 RAL-406 2366 chr3R 20512992 20513036 chr3R 20515705 20515759 opus 13 2721 0.0 0.0 0.0 13.0 2767 chr3R 20512992 intergenic not near genes chr3R 20514376 intergenic not near genes chr3R 20515759 intergenic not near genes chr3R_13_20510001 chr3R_20510001 RAL-406 2367 chr3R 20564125 20564155 chr3R 20564494 20564514 8 368 1.5 9.0 5.2 1.3 389 chr3R 20564125 intron CG5191 + chr3R 20564320 intron CG5191 + chr3R 20564514 intron CG5191 + chr3R_8_20560001 chr3R_20560001 RAL-406 2368 chr3R 20592762 20592811 chr3R 20592878 20592926 10 115 0.0 5.0 2.5 2.9 164 chr3R 20592762 intergenic CG4159 -,bon + chr3R 20592844 intergenic CG4159 -,bon + chr3R 20592926 intergenic bon +,CG4159 - chr3R_10_20590001 chr3R_20590001 RAL-406 2369 chr3R 20601849 20601874 chr3R 20601952 20601957 5 95 11.0 0.0 5.5 0.8 108 chr3R 20601849 intron bon + chr3R 20601903 intron bon + chr3R 20601957 intron bon + chr3R_5_20600001 chr3R_20600001 RAL-406 2370 chr3R 20684246 20684301 chr3R 20684440 20684495 17 189 5.5 3.0 4.2 3.3 249 chr3R 20684246 intergenic not near genes chr3R 20684370 intergenic not near genes chr3R 20684495 intergenic not near genes chr3R_17_20680001 chr3R_20680001 RAL-406 2371 chr3R 20722843 20722883 chr3R 20722979 20723015 7 128 3.0 1.0 2.0 2.3 172 chr3R 20722843 intergenic not near genes chr3R 20722929 intergenic not near genes chr3R 20723015 intergenic not near genes chr3R_7_20720001 chr3R_20720001 RAL-406 2372 chr3R 20730935 20730950 chr3R 20731034 20731061 4 104 7.5 0.5 4.0 0.8 126 chr3R 20730935 intergenic not near genes chr3R 20730998 intergenic not near genes chr3R 20731061 intergenic not near genes chr3R_4_20730001 chr3R_20730001 RAL-406 2373 chr3R 20750338 20750378 chr3R 20750440 20750480 9 97 6.5 9.0 7.8 1.0 142 chr3R 20750338 exon CG42322 + chr3R 20750409 intron CG42322 + chr3R 20750480 intron CG42322 + chr3R_9_20750001 chr3R_20750001 RAL-406 2374 chr3R 20754315 20754342 chr3R 20754404 20754453 21 103 7.0 7.0 7.0 2.6 138 chr3R 20754315 intron CG42322 + chr3R 20754384 intron CG42322 + chr3R 20754453 intron CG42322 + chr3R_21_20750001 chr3R_20750001 RAL-406 2375 chr3R 20787442 20787457 chr3R 20787529 20787562 8 103 2.5 6.0 4.2 1.5 120 chr3R 20787442 intron Syp + chr3R 20787502 intron Syp + chr3R 20787562 intron Syp + chr3R_8_20785001 chr3R_20785001 RAL-406 2376 chr3R 20848340 20848357 chr3R 20848450 20848467 5 109 1.5 6.0 3.8 1.0 127 chr3R 20848340 intergenic not near genes chr3R 20848404 intergenic not near genes chr3R 20848467 intergenic not near genes chr3R_5_20845001 chr3R_20845001 RAL-406 2377 chr3R 20850069 20850105 chr3R 20850174 20850210 17 104 1.5 6.0 3.8 3.5 141 chr3R 20850069 intergenic RpS30 + chr3R 20850140 intergenic RpS30 + chr3R 20850210 intergenic RpS30 + chr3R_17_20850001 chr3R_20850001 RAL-406 2378 chr3R 20854471 20854511 chr3R 20859281 20859312 Doc 11 4806 11.0 5.0 8.0 1.2 4841 chr3R 20854471 intron Ir93a - chr3R 20856892 intron Ir93a - chr3R 20859312 exon Ir93a - chr3R_11_20855001 chr3R_20855001 RAL-406 2379 chr3R 20900517 20900574 chr3R 20900618 20900675 23 100 5.0 5.5 5.2 3.7 158 chr3R 20900517 intergenic not near genes chr3R 20900596 intergenic not near genes chr3R 20900675 intergenic not near genes chr3R_23_20900001 chr3R_20900001 RAL-406 2380 chr3R 20936072 20936108 chr3R 20936169 20936205 5 97 2.5 2.5 2.5 1.4 133 chr3R 20936072 intron CG31191 - chr3R 20936138 intron CG31191 - chr3R 20936205 intron CG31191 - chr3R_5_20935001 chr3R_20935001 RAL-406 2381 chr3R 21041089 21041128 chr3R 21041253 21041301 17 168 2.5 5.0 3.8 3.5 212 chr3R 21041089 exon Dhc93AB - chr3R 21041195 intron Dhc93AB - chr3R 21041301 intron Dhc93AB - chr3R_17_21040001 chr3R_21040001 RAL-406 2382 chr3R 21101539 21101549 chr3R 21101645 21101683 6 117 2.0 5.0 3.5 1.3 144 chr3R 21101539 exon CG7044 - chr3R 21101611 5` UTR CG7044 - chr3R 21101683 5` UTR CG7044 - chr3R_6_21100001 chr3R_21100001 RAL-406 2383 chr3R 21108036 21108059 chr3R 21108309 21108340 15 280 7.0 6.5 6.8 1.9 304 chr3R 21108036 intergenic Sec15 -,rtet + chr3R 21108188 intergenic Sec15 -,rtet + chr3R 21108340 intergenic rtet +,Sec15 - chr3R_15_21105001 chr3R_21105001 RAL-406 2384 chr3R 21188057 21188085 chr3R 21188171 21188209 4 120 0.0 0.0 0.0 4.0 152 chr3R 21188057 intron SNF4Agamma + chr3R 21188133 intron SNF4Agamma + chr3R 21188209 intron SNF4Agamma + chr3R_4_21185001 chr3R_21185001 RAL-406 2385 chr3R 21214694 21214727 chr3R 21214795 21214805 6 96 4.0 0.0 2.0 2.0 111 chr3R 21214694 intergenic CG5862 + chr3R 21214750 intergenic CG5862 + chr3R 21214805 intergenic CG5862 + chr3R_6_21210001 chr3R_21210001 RAL-406 2386 chr3R 21240437 21240475 chr3R 21240543 21240587 14 109 2.5 7.5 5.0 2.3 150 chr3R 21240437 intergenic not near genes chr3R 21240512 intergenic not near genes chr3R 21240587 intergenic not near genes chr3R_14_21240001 chr3R_21240001 RAL-406 2387 chr3R 21245836 21245864 chr3R 21245940 21245948 13 101 7.5 5.0 6.2 1.8 112 chr3R 21245836 intergenic CG5892 + chr3R 21245892 intergenic CG5892 + chr3R 21245948 intergenic not near genes chr3R_13_21245001 chr3R_21245001 RAL-406 2388 chr3R 21379461 21379465 chr3R 21379632 21379636 4 171 1.5 7.0 4.2 0.8 175 chr3R 21379461 intron tin + chr3R 21379548 intron tin + chr3R 21379636 intron tin + chr3R_4_21375001 chr3R_21375001 RAL-406 2389 chr3R 21385917 21385960 chr3R 21386008 21386027 8 87 3.5 3.5 3.5 1.8 110 chr3R 21385917 intergenic not near genes chr3R 21385972 intergenic not near genes chr3R 21386027 intergenic not near genes chr3R_8_21385001 chr3R_21385001 RAL-406 2390 chr3R 21422518 21422558 chr3R 21422616 21422649 6 96 1.5 1.5 1.5 2.4 131 chr3R 21422518 intron lbl - chr3R 21422584 intron lbl - chr3R 21422649 intron lbl - chr3R_6_21420001 chr3R_21420001 RAL-406 2391 chr3R 21464390 21464425 chr3R 21464491 21464531 16 103 4.0 6.5 5.2 2.6 141 chr3R 21464390 intergenic not near genes chr3R 21464460 intergenic not near genes chr3R 21464531 intergenic not near genes chr3R_16_21460001 chr3R_21460001 RAL-406 2392 chr3R 21472013 21472032 chr3R 21472089 21472122 9 85 3.0 6.0 4.5 1.6 109 chr3R 21472013 intergenic not near genes chr3R 21472068 intergenic not near genes chr3R 21472122 intergenic not near genes chr3R_9_21470001 chr3R_21470001 RAL-406 2393 chr3R 21481366 21481383 chr3R 21481477 21481477 4 105 18.0 0.0 9.0 0.4 111 chr3R 21481366 intergenic not near genes chr3R 21481422 intergenic not near genes chr3R 21481477 intergenic not near genes chr3R_4_21480001 chr3R_21480001 RAL-406 2394 chr3R 21518259 21518272 chr3R 21518345 21518351 7 95 0.0 5.0 2.5 2.0 92 chr3R 21518259 intergenic not near genes chr3R 21518305 intergenic not near genes chr3R 21518351 intergenic not near genes chr3R_7_21515001 chr3R_21515001 RAL-406 2395 chr3R 21520106 21520140 chr3R 21520220 21520241 11 109 9.5 8.0 8.8 1.1 135 chr3R 21520106 intergenic not near genes chr3R 21520174 intergenic not near genes chr3R 21520241 intergenic not near genes chr3R_11_21520001 chr3R_21520001 RAL-406 2396 chr3R 21594636 21594668 chr3R 21597308 21597319 5 2668 4.0 3.5 3.8 1.0 2683 chr3R 21594636 intron,5` UTR InR -,CR43653 + chr3R 21595978 intron InR - chr3R 21597319 intron InR - chr3R_5_21595001 chr3R_21595001 RAL-406 2397 chr3R 21725666 21725683 chr3R 21725822 21725839 5 156 0.0 8.0 4.0 1.0 173 chr3R 21725666 intergenic not near genes chr3R 21725752 intergenic not near genes chr3R 21725839 intergenic not near genes chr3R_5_21725001 chr3R_21725001 RAL-406 2398 chr3R 21734844 21734891 chr3R 21734940 21734955 11 88 5.5 0.5 3.0 2.8 111 chr3R 21734844 intergenic not near genes chr3R 21734900 intergenic not near genes chr3R 21734955 intergenic not near genes chr3R_11_21730001 chr3R_21730001 RAL-406 2399 chr3R 21784824 21784829 chr3R 21784923 21784928 4 99 13.5 7.0 10.2 0.4 104 chr3R 21784824 3` UTR,3` UTR CASK -,CRG - chr3R 21784876 3` UTR,3` UTR CASK -,CRG - chr3R 21784928 3` UTR,3` UTR CASK -,CRG - chr3R_4_21780001 chr3R_21780001 RAL-406 2400 chr3R 21784836 21784874 chr3R 21784920 21784971 9 93 3.0 6.0 4.5 1.6 135 chr3R 21784836 3` UTR,3` UTR CASK -,CRG - chr3R 21784904 3` UTR,3` UTR CASK -,CRG - chr3R 21784971 3` UTR,3` UTR CASK -,CRG - chr3R_9_21780001 chr3R_21780001 RAL-406 2401 chr3R 21907536 21907536 chr3R 28831801 28831802 5 6924266 21.0 11.0 16.0 0.3 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_5_25365001 chr3R_25365001 RAL-406 2402 chr3R 21924026 21924048 chr3R 21924100 21924140 9 92 4.0 2.5 3.2 2.1 114 chr3R 21924026 intergenic not near genes chr3R 21924083 intergenic not near genes chr3R 21924140 intergenic not near genes chr3R_9_21920001 chr3R_21920001 RAL-406 2403 chr3R 21939673 21939720 chr3R 21939801 21939823 24 124 15.0 7.5 11.2 2.0 150 chr3R 21939673 intergenic not near genes chr3R 21939748 intergenic not near genes chr3R 21939823 intergenic not near genes chr3R_24_21935001 chr3R_21935001 RAL-406 2404 chr3R 22052330 22052380 chr3R 22052834 22052874 22 501 5.5 6.0 5.8 3.2 544 chr3R 22052330 intron how + chr3R 22052602 intron how + chr3R 22052874 intron how + chr3R_22_22050001 chr3R_22050001 RAL-406 2405 chr3R 22084616 22084623 chr3R 22084700 22084732 6 101 0.0 9.5 4.8 1.0 116 chr3R 22084616 intergenic not near genes chr3R 22084674 intergenic not near genes chr3R 22084732 intergenic not near genes chr3R_6_22080001 chr3R_22080001 RAL-406 2406 chr3R 22117395 22117448 chr3R 22117491 22117544 22 95 5.5 7.5 6.5 2.9 149 chr3R 22117395 intergenic Ir94b -,Ir94c - chr3R 22117470 intergenic Ir94c -,Ir94b - chr3R 22117544 intergenic Ir94c -,Ir94b - chr3R_22_22115001 chr3R_22115001 RAL-406 2407 chr3R 22144587 22144632 chr3R 22144796 22144828 14 208 4.5 6.0 5.2 2.3 241 chr3R 22144587 intron SKIP + chr3R 22144708 intron SKIP + chr3R 22144828 intron SKIP + chr3R_14_22140001 chr3R_22140001 RAL-406 2408 chr3R 22172539 22172550 chr3R 22172808 22172820 4 268 9.0 7.0 8.0 0.4 281 chr3R 22172539 intron SKIP + chr3R 22172680 intron SKIP + chr3R 22172820 intron SKIP + chr3R_4_22170001 chr3R_22170001 RAL-406 2409 chr3R 22234664 22234687 chr3R 22236003 22236026 pogo 6 1337 11.0 7.5 9.2 0.6 1362 chr3R 22234664 intron SKIP + chr3R 22235345 intron SKIP + chr3R 22236026 intron SKIP + chr3R_6_22235001 chr3R_22235001 RAL-406 2410 chr3R 22234688 22234714 chr3R 22236002 22236053 pogo 12 1330 6.5 7.0 6.8 1.5 1365 chr3R 22234688 intron SKIP + chr3R 22235370 intron SKIP + chr3R 22236053 intron SKIP + chr3R_12_22235001 chr3R_22235001 RAL-406 2411 chr3R 22239472 22239522 chr3R 22248551 22248590 roo 5 9073 4.5 0.0 2.2 1.6 9118 chr3R 22239472 intron SKIP + chr3R 22244031 intron SKIP + chr3R 22248590 intron SKIP + chr3R_5_22240001 chr3R_22240001 RAL-406 2412 chr3R 22320848 22320900 chr3R 22321259 22321311 28 413 40.5 38.0 39.2 0.7 463 chr3R 22320848 intron CG34377 - chr3R 22321080 intron CG34377 - chr3R 22321311 intron CG34377 - chr3R_28_22320001 chr3R_22320001 RAL-406 2413 chr3R 22328892 22328944 chr3R 22331571 22331623 12 2680 40.5 51.5 46.0 0.3 2731 chr3R 22328892 intergenic CG7080 + chr3R 22330258 exon CG7080 + chr3R 22331623 intron CG33721 + chr3R_12_22330001 chr3R_22330001 RAL-406 2414 chr3R 22336907 22336924 chr3R 22337009 22337026 6 101 1.0 4.5 2.8 1.6 119 chr3R 22336907 intron CG5388 - chr3R 22336966 intron CG5388 - chr3R 22337026 intron CG5388 - chr3R_6_22335001 chr3R_22335001 RAL-406 2415 chr3R 22339575 22339590 chr3R 22339664 22339699 7 102 5.0 11.0 8.0 0.8 124 chr3R 22339575 intron CG5388 - chr3R 22339637 intron CG5388 - chr3R 22339699 intron CG5388 - chr3R_7_22335001 chr3R_22335001 RAL-406 2416 chr3R 22339593 22339607 chr3R 22339662 22339672 5 85 2.0 10.0 6.0 0.7 79 chr3R 22339593 intron CG5388 - chr3R 22339632 intron CG5388 - chr3R 22339672 intron CG5388 - chr3R_5_22335001 chr3R_22335001 RAL-406 2417 chr3R 22346174 22346180 chr3R 22346280 22346286 5 105 9.0 7.5 8.2 0.5 112 chr3R 22346174 intergenic not near genes chr3R 22346230 intergenic not near genes chr3R 22346286 intergenic not near genes chr3R_5_22345001 chr3R_22345001 RAL-406 2418 chr3R 22349282 22349303 chr3R 22349411 22349421 7 127 1.0 3.0 2.0 2.3 139 chr3R 22349282 intergenic not near genes chr3R 22349352 intergenic not near genes chr3R 22349421 intergenic not near genes chr3R_7_22345001 chr3R_22345001 RAL-406 2419 chr3R 22428565 22428601 chr3R 22428656 22428682 7 89 7.5 2.5 5.0 1.2 117 chr3R 22428565 intron CG13847 - chr3R 22428624 intron CG13847 - chr3R 22428682 intron CG13847 - chr3R_7_22425001 chr3R_22425001 RAL-406 2420 chr3R 22428602 22428608 chr3R 22428652 22428694 4 68 6.0 4.0 5.0 0.7 92 chr3R 22428602 intron CG13847 - chr3R 22428648 intron CG13847 - chr3R 22428694 intron CG13847 - chr3R_4_22425001 chr3R_22425001 RAL-406 2421 chr3R 22450525 22450578 chr3R 22453185 22453197 NOF 14 2650 3.0 7.0 5.0 2.3 2672 chr3R 22450525 intron CG34376 + chr3R 22451861 intron CG34376 + chr3R 22453197 intron CG34376 + chr3R_14_22450001 chr3R_22450001 RAL-406 2422 chr3R 22552185 22552211 chr3R 22552266 22552310 6 95 3.5 5.0 4.2 1.2 125 chr3R 22552185 3` UTR,intron CR44062 -,bond + chr3R 22552248 3` UTR,intron CR44062 -,bond + chr3R 22552310 intron,intron CR44062 -,bond + chr3R_6_22550001 chr3R_22550001 RAL-406 2423 chr3R 22619821 22619871 chr3R 22620028 22620078 19 205 4.5 6.0 5.2 3.1 257 chr3R 22619821 3` UTR mRpL45 + chr3R 22619950 intergenic loco -,mRpL45 + chr3R 22620078 3` UTR loco - chr3R_19_22615001 chr3R_22615001 RAL-406 2424 chr3R 22643860 22643865 chr3R 22643965 22643970 4 105 12.0 2.5 7.2 0.5 110 chr3R 22643860 intron wake + chr3R 22643915 intron wake + chr3R 22643970 intron wake + chr3R_4_22640001 chr3R_22640001 RAL-406 2425 chr3R 22673689 22673729 chr3R 22673804 22673844 14 113 9.5 4.0 6.8 1.8 155 chr3R 22673689 intron wake + chr3R 22673766 intron wake + chr3R 22673844 intron wake + chr3R_14_22670001 chr3R_22670001 RAL-406 2426 chr3R 22769081 22769125 chr3R 22769170 22769222 20 95 4.0 7.5 5.8 2.9 141 chr3R 22769081 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769152 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769222 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_20_22765001 chr3R_22765001 RAL-406 2427 chr3R 22794260 22794301 chr3R 22794506 22794537 15 244 4.0 5.0 4.5 2.7 277 chr3R 22794260 intergenic CG7029 + chr3R 22794398 intergenic CG7029 + chr3R 22794537 intergenic not near genes chr3R_15_22790001 chr3R_22790001 RAL-406 2428 chr3R 22797749 22797934 chr3R 22797852 22798044 21 107 0.0 0.0 0.0 21.0 295 chr3R 22797749 intergenic not near genes chr3R 22797896 intergenic not near genes chr3R 22798044 intergenic not near genes chr3R_21_22795001 chr3R_22795001 RAL-406 2429 chr3R 22802738 22802755 chr3R 22802849 22802866 8 111 4.0 0.5 2.2 2.5 128 chr3R 22802738 intergenic not near genes chr3R 22802802 intergenic not near genes chr3R 22802866 intergenic not near genes chr3R_8_22800001 chr3R_22800001 RAL-406 2430 chr3R 22830270 22830313 chr3R 22830371 22830419 7 97 0.5 6.5 3.5 1.6 149 chr3R 22830270 intergenic not near genes chr3R 22830344 intergenic not near genes chr3R 22830419 intergenic not near genes chr3R_7_22830001 chr3R_22830001 RAL-406 2431 chr3R 22881185 22881222 chr3R 22884911 22884948 Doc 17 3724 10.5 11.0 10.8 1.4 3763 chr3R 22881185 intergenic not near genes chr3R 22883066 intergenic not near genes chr3R 22884948 intergenic not near genes chr3R_17_22880001 chr3R_22880001 RAL-406 2432 chr3R 22893519 22893573 chr3R 22893633 22893676 13 107 2.0 5.0 3.5 2.9 157 chr3R 22893519 intergenic not near genes chr3R 22893598 intergenic not near genes chr3R 22893676 intergenic not near genes chr3R_13_22890001 chr3R_22890001 RAL-406 2433 chr3R 22945944 22945973 chr3R 22946044 22946077 6 101 0.0 2.5 1.2 2.7 133 chr3R 22945944 intron klg + chr3R 22946010 intron klg + chr3R 22946077 intron klg + chr3R_6_22945001 chr3R_22945001 RAL-406 2434 chr3R 23018716 23018769 chr3R 23018818 23018865 8 93 3.5 2.5 3.0 2.0 149 chr3R 23018716 intergenic not near genes chr3R 23018790 intergenic not near genes chr3R 23018865 intergenic not near genes chr3R_8_23015001 chr3R_23015001 RAL-406 2435 chr3R 23064158 23064206 chr3R 23064285 23064302 9 117 1.5 4.0 2.8 2.4 144 chr3R 23064158 exon CG17111 - chr3R 23064230 intron CG17111 - chr3R 23064302 exon CG17111 - chr3R_9_23060001 chr3R_23060001 RAL-406 2436 chr3R 23064866 23064900 chr3R 23064977 23065011 27 108 0.5 13.5 7.0 3.4 145 chr3R 23064866 intron CG17111 - chr3R 23064938 intron CG17111 - chr3R 23065011 intron CG17111 - chr3R_27_23060001 chr3R_23060001 RAL-406 2437 chr3R 23070638 23070696 chr3R 23070738 23070794 8 97 0.0 0.0 0.0 8.0 156 chr3R 23070638 3` UTR CG13830 - chr3R 23070716 3` UTR CG13830 - chr3R 23070794 3` UTR CG13830 - chr3R_8_23070001 chr3R_23070001 RAL-406 2438 chr3R 23100552 23100600 chr3R 23100987 23101045 5 441 3.5 0.0 1.8 1.8 493 chr3R 23100552 intron,exon CG13830 -,CG6738 + chr3R 23100798 intron,exon CG13830 -,CG6738 + chr3R 23101045 intron CG13830 - chr3R_5_23100001 chr3R_23100001 RAL-406 2439 chr3R 23197943 23197965 chr3R 23198042 23198064 10 98 4.5 6.0 5.2 1.6 121 chr3R 23197943 exon cnc - chr3R 23198004 intron cnc - chr3R 23198064 intron cnc - chr3R_10_23195001 chr3R_23195001 RAL-406 2440 chr3R 23204401 23204428 chr3R 23205481 23205525 15 1083 33.0 45.0 39.0 0.4 1124 chr3R 23204401 intron cnc - chr3R 23204963 intron cnc - chr3R 23205525 intron cnc - chr3R_15_23200001 chr3R_23200001 RAL-406 2441 chr3R 23211964 23211992 chr3R 23212061 23212089 6 97 3.5 7.5 5.5 0.9 125 chr3R 23211964 intron cnc - chr3R 23212026 intron cnc - chr3R 23212089 intron cnc - chr3R_6_23210001 chr3R_23210001 RAL-406 2442 chr3R 23225039 23225042 chr3R 23225135 23225138 4 96 9.5 0.0 4.8 0.7 99 chr3R 23225039 intron cnc - chr3R 23225088 intron cnc - chr3R 23225138 intron cnc - chr3R_4_23225001 chr3R_23225001 RAL-406 2443 chr3R 23234830 23234840 chr3R 23234927 23234937 6 95 8.0 11.5 9.8 0.6 107 chr3R 23234830 intron CG4467 - chr3R 23234884 intron CG4467 - chr3R 23234937 intron CG4467 - chr3R_6_23230001 chr3R_23230001 RAL-406 2444 chr3R 23311656 23311708 chr3R 23311770 23311822 11 112 11.5 5.5 8.5 1.2 166 chr3R 23311656 intron pnt - chr3R 23311739 intron pnt - chr3R 23311822 intron pnt - chr3R_11_23310001 chr3R_23310001 RAL-406 2445 chr3R 23319656 23319675 chr3R 23319754 23319773 10 96 0.0 6.0 3.0 2.5 117 chr3R 23319656 intron pnt - chr3R 23319714 intron pnt - chr3R 23319773 intron pnt - chr3R_10_23315001 chr3R_23315001 RAL-406 2446 chr3R 23357002 23357012 chr3R 23357108 23357118 5 106 3.5 6.5 5.0 0.8 116 chr3R 23357002 intron Sec13 + chr3R 23357060 intron Sec13 + chr3R 23357118 intron Sec13 + chr3R_5_23355001 chr3R_23355001 RAL-406 2447 chr3R 23453675 23453703 chr3R 23453763 23453802 15 97 4.0 7.0 5.5 2.3 127 chr3R 23453675 intron CG4374 - chr3R 23453738 intron CG4374 - chr3R 23453802 intron CG4374 - chr3R_15_23450001 chr3R_23450001 RAL-406 2448 chr3R 23558382 23558428 chr3R 23560183 23560199 Bari1 9 1798 5.0 3.0 4.0 1.8 1817 chr3R 23558382 intron beat-IV + chr3R 23559290 intron beat-IV + chr3R 23560199 intron beat-IV + chr3R_9_23555001 chr3R_23555001 RAL-406 2449 chr3R 23564420 23564473 chr3R 23564584 23564616 22 162 4.5 4.5 4.5 4.0 196 chr3R 23564420 intron beat-IV + chr3R 23564518 intron beat-IV + chr3R 23564616 intron beat-IV + chr3R_22_23560001 chr3R_23560001 RAL-406 2450 chr3R 23597839 23597880 chr3R 23597935 23597965 13 91 4.5 10.0 7.2 1.6 126 chr3R 23597839 intron CG10183 - chr3R 23597902 exon CG10183 - chr3R 23597965 intron CG10183 - chr3R_13_23595001 chr3R_23595001 RAL-406 2451 chr3R 23626122 23626163 chr3R 23626236 23626277 16 113 0.0 4.0 2.0 5.3 155 chr3R 23626122 intron CG31145 - chr3R 23626200 intron CG31145 - chr3R 23626277 intron CG31145 - chr3R_16_23625001 chr3R_23625001 RAL-406 2452 chr3R 23640068 23640092 chr3R 23640161 23640193 12 98 0.0 8.0 4.0 2.4 125 chr3R 23640068 intron CG31145 - chr3R 23640130 intron CG31145 - chr3R 23640193 intron CG31145 - chr3R_12_23640001 chr3R_23640001 RAL-406 2453 chr3R 23677171 23677198 chr3R 23677274 23677301 9 98 3.5 7.5 5.5 1.4 130 chr3R 23677171 intergenic CG13822 + chr3R 23677236 intergenic CG13822 + chr3R 23677301 intergenic CG13822 + chr3R_9_23675001 chr3R_23675001 RAL-406 2454 chr3R 23688456 23688502 chr3R 23688564 23688613 6 100 3.5 3.0 3.2 1.4 157 chr3R 23688456 intergenic SPE + chr3R 23688534 intergenic SPE +,CG10254 - chr3R 23688613 intergenic CG10254 -,SPE + chr3R_6_23685001 chr3R_23685001 RAL-406 2455 chr3R 23835389 23835433 chr3R 23844559 23844603 roo 20 9169 5.5 6.5 6.0 2.9 9214 chr3R 23835389 intron CG34355 + chr3R 23839996 intron CG34355 + chr3R 23844603 intron CG34355 + chr3R_20_23835001 chr3R_23835001 RAL-406 2456 chr3R 23851072 23851085 chr3R 23858757 23858772 opus 6 7686 6.5 17.0 11.8 0.5 7700 chr3R 23851072 3` UTR CG34355 + chr3R 23854922 intergenic not near genes chr3R 23858772 intergenic not near genes chr3R_6_23850001 chr3R_23850001 RAL-406 2457 chr3R 23868200 23868238 chr3R 23868292 23868296 14 89 2.0 2.5 2.2 4.4 96 chr3R 23868200 intron Pli - chr3R 23868248 intron Pli - chr3R 23868296 intron Pli - chr3R_14_23865001 chr3R_23865001 RAL-406 2458 chr3R 23871326 23871344 chr3R 23872033 23872062 6 711 7.0 1.5 4.2 1.2 736 chr3R 23871326 intron Pli - chr3R 23871694 intron Pli - chr3R 23872062 intron Pli - chr3R_6_23870001 chr3R_23870001 RAL-406 2459 chr3R 23888064 23888109 chr3R 23888170 23888215 16 100 12.0 5.5 8.8 1.6 151 chr3R 23888064 intron Pli - chr3R 23888140 intron Pli - chr3R 23888215 intron Pli - chr3R_16_23885001 chr3R_23885001 RAL-406 2460 chr3R 23893933 23893958 chr3R 23894096 23894140 9 176 3.0 4.0 3.5 2.0 207 chr3R 23893933 intergenic sba - chr3R 23894036 intergenic sba - chr3R 23894140 intergenic sba - chr3R_9_23890001 chr3R_23890001 RAL-406 2461 chr3R 23944887 23944920 chr3R 23944992 23945025 13 103 10.0 5.0 7.5 1.5 138 chr3R 23944887 intron CG12268 - chr3R 23944956 intron CG12268 - chr3R 23945025 exon CG12268 - chr3R_13_23940001 chr3R_23940001 RAL-406 2462 chr3R 23949020 23949070 chr3R 23949117 23949167 23 93 4.5 4.5 4.5 4.2 147 chr3R 23949020 intergenic not near genes chr3R 23949094 intergenic not near genes chr3R 23949167 intergenic not near genes chr3R_23_23945001 chr3R_23945001 RAL-406 2463 chr3R 24011650 24011680 chr3R 24011753 24011783 8 102 3.5 4.0 3.8 1.7 133 chr3R 24011650 intron KrT95D - chr3R 24011716 intron KrT95D - chr3R 24011783 intron KrT95D - chr3R_8_24010001 chr3R_24010001 RAL-406 2464 chr3R 24021605 24021660 chr3R 24021715 24021760 19 107 4.5 6.0 5.2 3.1 155 chr3R 24021605 intron KrT95D - chr3R 24021682 intron KrT95D - chr3R 24021760 intron KrT95D - chr3R_19_24020001 chr3R_24020001 RAL-406 2465 chr3R 24076913 24076941 chr3R 24078395 24078428 hobo 7 1483 5.5 3.0 4.2 1.3 1515 chr3R 24076913 intron 4EHP - chr3R 24077670 intron 4EHP - chr3R 24078428 intron 4EHP - chr3R_7_24075001 chr3R_24075001 RAL-406 2466 chr3R 24199718 24199773 chr3R 24199818 24199832 9 93 7.0 2.5 4.8 1.6 114 chr3R 24199718 intron twin - chr3R 24199775 intron twin - chr3R 24199832 intron twin - chr3R_9_24195001 chr3R_24195001 RAL-406 2467 chr3R 24207209 24207228 chr3R 24212300 24212324 flea 5 5093 4.5 8.0 6.2 0.7 5115 chr3R 24207209 intron twin - chr3R 24209766 intron twin - chr3R 24212324 intron twin - chr3R_5_24205001 chr3R_24205001 RAL-406 2468 chr3R 24431583 24431603 chr3R 24431682 24431687 5 91 7.5 0.0 3.8 1.0 104 chr3R 24431583 intron nAChRalpha1 - chr3R 24431635 intron nAChRalpha1 - chr3R 24431687 intron nAChRalpha1 - chr3R_5_24430001 chr3R_24430001 RAL-406 2469 chr3R 24431607 24431624 chr3R 24431681 24431723 5 94 3.5 0.0 1.8 1.8 116 chr3R 24431607 intron nAChRalpha1 - chr3R 24431665 intron nAChRalpha1 - chr3R 24431723 intron nAChRalpha1 - chr3R_5_24430001 chr3R_24430001 RAL-406 2470 chr3R 24434220 24434274 chr3R 24434318 24434372 21 92 6.5 3.0 4.8 3.6 152 chr3R 24434220 intron nAChRalpha1 - chr3R 24434296 intron nAChRalpha1 - chr3R 24434372 intron nAChRalpha1 - chr3R_21_24430001 chr3R_24430001 RAL-406 2471 chr3R 24475046 24475095 chr3R 24475221 24475270 7 174 3.0 0.0 1.5 2.8 224 chr3R 24475046 intergenic not near genes chr3R 24475158 intergenic not near genes chr3R 24475270 intergenic not near genes chr3R_7_24475001 chr3R_24475001 RAL-406 2472 chr3R 24493042 24493089 chr3R 24493148 24493163 17 102 6.5 8.0 7.2 2.1 121 chr3R 24493042 intergenic not near genes chr3R 24493102 intergenic not near genes chr3R 24493163 intergenic not near genes chr3R_17_24490001 chr3R_24490001 RAL-406 2473 chr3R 24493269 24493305 chr3R 24493519 24493555 BS 15 248 9.5 7.0 8.2 1.6 286 chr3R 24493269 intergenic not near genes chr3R 24493412 intergenic not near genes chr3R 24493555 intergenic not near genes chr3R_15_24490001 chr3R_24490001 RAL-406 2474 chr3R 24495267 24495314 chr3R 24495366 24495413 12 94 4.0 2.0 3.0 3.0 146 chr3R 24495267 intergenic not near genes chr3R 24495340 intergenic not near genes chr3R 24495413 intergenic not near genes chr3R_12_24495001 chr3R_24495001 RAL-406 2475 chr3R 24527782 24527835 chr3R 24527893 24527916 22 108 3.0 3.0 3.0 5.5 134 chr3R 24527782 intergenic CG13618 +,CG6607 + chr3R 24527849 intergenic CG6607 +,CG13618 + chr3R 24527916 intergenic CG6607 +,CG13618 + chr3R_22_24525001 chr3R_24525001 RAL-406 2476 chr3R 24667587 24667623 chr3R 24667684 24667720 19 97 5.5 0.0 2.8 5.0 133 chr3R 24667587 intron slo + chr3R 24667654 intron slo + chr3R 24667720 intron slo + chr3R_19_24665001 chr3R_24665001 RAL-406 2477 chr3R 24670042 24670194 chr3R 24670172 24670299 33 122 0.0 0.0 0.0 33.0 257 chr3R 24670042 intron slo + chr3R 24670170 intron slo + chr3R 24670299 intron slo + chr3R_33_24670001 chr3R_24670001 RAL-406 2478 chr3R 24730113 24730124 chr3R 24732471 24732476 Doc 4 2360 2.0 0.0 1.0 2.0 2363 chr3R 24730113 intron tok + chr3R 24731294 intron tok + chr3R 24732476 intron tok + chr3R_4_24730001 chr3R_24730001 RAL-406 2479 chr3R 24743009 24743061 chr3R 24743114 24743165 14 103 6.5 3.5 5.0 2.3 156 chr3R 24743009 intron tok + chr3R 24743087 intron tok + chr3R 24743165 exon tok + chr3R_14_24740001 chr3R_24740001 RAL-406 2480 chr3R 24787530 24787561 chr3R 24787626 24787657 9 96 5.5 2.5 4.0 1.8 127 chr3R 24787530 intergenic CG5805 - chr3R 24787594 intergenic CG5805 -,Ets96B + chr3R 24787657 intergenic CG5805 -,Ets96B + chr3R_9_24785001 chr3R_24785001 RAL-406 2481 chr3R 24789962 24790013 chr3R 24790127 24790178 5 154 4.5 2.0 3.2 1.2 216 chr3R 24789962 intron,5` UTR Ets96B +,CG13634 - chr3R 24790070 intron,5` UTR Ets96B +,CG13634 - chr3R 24790178 intron Ets96B + chr3R_5_24790001 chr3R_24790001 RAL-406 2482 chr3R 24854869 24854913 chr3R 24854971 24855015 14 98 5.5 5.0 5.2 2.3 146 chr3R 24854869 3` UTR,3` UTR nct +,HdacX - chr3R 24854942 3` UTR HdacX - chr3R 24855015 3` UTR HdacX - chr3R_14_24850001 chr3R_24850001 RAL-406 2483 chr3R 24893447 24893483 chr3R 24893547 24893583 19 98 9.5 2.5 6.0 2.7 136 chr3R 24893447 intron CG31121 - chr3R 24893515 intron CG31121 - chr3R 24893583 intron CG31121 - chr3R_19_24890001 chr3R_24890001 RAL-406 2484 chr3R 24927117 24927153 chr3R 24931916 24931934 Doc 18 4806 7.5 3.5 5.5 2.8 4817 chr3R 24927117 intergenic Trf4-2 + chr3R 24929526 intergenic not near genes chr3R 24931934 intergenic CG11771 + chr3R_18_24925001 chr3R_24925001 RAL-406 2485 chr3R 25004894 25004899 chr3R 25004997 25005002 5 103 1.0 6.0 3.5 1.1 108 chr3R 25004894 intron tnc + chr3R 25004948 intron tnc + chr3R 25005002 intron tnc + chr3R_5_25000001 chr3R_25000001 RAL-406 2486 chr3R 25004900 25004922 chr3R 25004983 25005025 10 97 0.5 5.5 3.0 2.5 125 chr3R 25004900 intron tnc + chr3R 25004962 intron tnc + chr3R 25005025 intron tnc + chr3R_10_25000001 chr3R_25000001 RAL-406 2487 chr3R 25018240 25018262 chr3R 25018337 25018346 4 91 3.5 6.5 5.0 0.7 106 chr3R 25018240 exon tnc + chr3R 25018293 exon tnc + chr3R 25018346 exon tnc + chr3R_4_25015001 chr3R_25015001 RAL-406 2488 chr3R 25018265 25018289 chr3R 25018336 25018344 10 69 1.5 6.5 4.0 2.0 79 chr3R 25018265 exon tnc + chr3R 25018304 exon tnc + chr3R 25018344 exon tnc + chr3R_10_25015001 chr3R_25015001 RAL-406 2489 chr3R 25027516 25027568 chr3R 25027749 25027801 14 230 4.5 3.0 3.8 2.9 285 chr3R 25027516 intron Hr96 + chr3R 25027658 intron Hr96 + chr3R 25027801 intron Hr96 + chr3R_14_25025001 chr3R_25025001 RAL-406 2490 chr3R 25166347 25166393 chr3R 25166443 25166488 21 94 7.0 4.5 5.8 3.1 141 chr3R 25166347 intergenic not near genes chr3R 25166418 intergenic not near genes chr3R 25166488 intergenic not near genes chr3R_21_25165001 chr3R_25165001 RAL-406 2491 chr3R 25280545 25280575 chr3R 25280815 25280845 21 269 3.5 3.0 3.2 5.0 300 chr3R 25280545 intergenic not near genes chr3R 25280695 intergenic not near genes chr3R 25280845 intergenic not near genes chr3R_21_25280001 chr3R_25280001 RAL-406 2492 chr3R 25289367 25289416 chr3R 25289534 25289584 12 164 4.5 7.5 6.0 1.7 217 chr3R 25289367 intergenic CG13658 + chr3R 25289476 intergenic CG11893 + chr3R 25289584 intergenic CG11893 + chr3R_12_25285001 chr3R_25285001 RAL-406 2493 chr3R 25303782 25303791 chr3R 25305630 25305677 27 1852 39.0 46.5 42.8 0.6 1895 chr3R 25303782 exon CG31370 + chr3R 25304730 exon CG31436 + chr3R 25305677 intergenic CG31436 + chr3R_27_25300001 chr3R_25300001 RAL-406 2494 chr3R 25368453 25368495 chr3R 25368591 25368617 18 137 5.5 0.0 2.8 4.7 164 chr3R 25368453 intron Fur1 - chr3R 25368535 intron Fur1 - chr3R 25368617 intron Fur1 - chr3R_18_25365001 chr3R_25365001 RAL-406 2495 chr3R 25528019 25528028 chr3R 25528142 25528151 5 123 8.5 7.5 8.0 0.6 132 chr3R 25528019 intron msi + chr3R 25528085 intron msi + chr3R 25528151 intron msi + chr3R_5_25525001 chr3R_25525001 RAL-406 2496 chr3R 25529381 25529410 chr3R 25529633 25529643 11 251 4.0 3.5 3.8 2.3 262 chr3R 25529381 intron msi + chr3R 25529512 intron msi + chr3R 25529643 intron msi + chr3R_11_25525001 chr3R_25525001 RAL-406 2497 chr3R 7773344 7773344 chr3R 25538123 25538124 14 17764780 22.5 14.5 18.5 0.7 17764780 chr3R 7773344 intergenic not near genes chr3R 16655734 intergenic modSP - chr3R 25538124 intron msi + chr3R_14_16655001 chr3R_16655001 RAL-406 2498 chr3R 25576836 25576864 chr3R 25576934 25576965 8 101 2.5 2.5 2.5 2.3 129 chr3R 25576836 intron msi + chr3R 25576900 intron msi + chr3R 25576965 intron msi + chr3R_8_25575001 chr3R_25575001 RAL-406 2499 chr3R 25629440 25629463 chr3R 25629536 25629542 5 91 6.0 2.5 4.2 1.0 102 chr3R 25629440 intergenic not near genes chr3R 25629491 intergenic not near genes chr3R 25629542 intergenic not near genes chr3R_5_25625001 chr3R_25625001 RAL-406 2500 chr3R 25725811 25725858 chr3R 25734991 25735038 roo 21 9179 8.5 8.5 8.5 2.2 9227 chr3R 25725811 intron LpR2 - chr3R 25730424 intron LpR2 - chr3R 25735038 intron LpR2 - chr3R_21_25730001 chr3R_25730001 RAL-406 2501 chr3R 25738620 25738635 chr3R 25738722 25738743 4 106 8.5 8.5 8.5 0.4 123 chr3R 25738620 intron LpR2 - chr3R 25738682 intron LpR2 - chr3R 25738743 intron LpR2 - chr3R_4_25735001 chr3R_25735001 RAL-406 2502 chr3R 25738636 25738662 chr3R 25738720 25738770 19 100 4.0 8.0 6.0 2.7 134 chr3R 25738636 intron LpR2 - chr3R 25738703 intron LpR2 - chr3R 25738770 intron LpR2 - chr3R_19_25735001 chr3R_25735001 RAL-406 2503 chr3R 25832681 25832724 chr3R 25841878 25841896 roo 9 9195 2.5 5.0 3.8 1.9 9215 chr3R 25832681 exon alpha4GT2 + chr3R 25837288 intron alpha4GT2 + chr3R 25841896 exon alpha4GT2 + chr3R_9_25835001 chr3R_25835001 RAL-406 2504 chr3R 25905619 25905655 chr3R 25905742 25905778 15 121 6.0 5.0 5.5 2.3 159 chr3R 25905619 intron CR43259 - chr3R 25905698 intron CR43259 - chr3R 25905778 intron CR43259 - chr3R_15_25905001 chr3R_25905001 RAL-406 2505 chr3R 25922483 25922520 chr3R 25922741 25922778 9 256 3.0 0.0 1.5 3.6 295 chr3R 25922483 exon CG14546 - chr3R 25922630 5` UTR CG14546 - chr3R 25922778 intergenic CG14546 - chr3R_9_25920001 chr3R_25920001 RAL-406 2506 chr3R 26060385 26060433 chr3R 26060491 26060539 15 103 3.0 8.0 5.5 2.3 154 chr3R 26060385 intron CG14544 + chr3R 26060462 intron CG14544 + chr3R 26060539 intron CG14544 + chr3R_15_26060001 chr3R_26060001 RAL-406 2507 chr3R 26093833 26093873 chr3R 26093924 26093970 19 92 4.0 2.5 3.2 4.5 137 chr3R 26093833 intron dys - chr3R 26093902 intron dys - chr3R 26093970 intron dys - chr3R_19_26090001 chr3R_26090001 RAL-406 2508 chr3R 26122448 26122480 chr3R 26122541 26122576 7 94 6.5 1.5 4.0 1.4 128 chr3R 26122448 intron CG31324 + chr3R 26122512 intron CG31324 + chr3R 26122576 intron CG31324 + chr3R_7_26120001 chr3R_26120001 RAL-406 2509 chr3R 26126532 26126566 chr3R 26126638 26126661 10 102 6.5 8.5 7.5 1.2 129 chr3R 26126532 intron CG31324 + chr3R 26126596 intron CG31324 + chr3R 26126661 intron,5` UTR CG31324 +,CG14556 + chr3R_10_26125001 chr3R_26125001 RAL-406 2510 chr3R 26181026 26181047 chr3R 26181128 26181149 6 102 5.5 6.0 5.8 0.9 123 chr3R 26181026 intron CG31323 + chr3R 26181088 intron CG31323 + chr3R 26181149 intron CG31323 + chr3R_6_26180001 chr3R_26180001 RAL-406 2511 chr3R 26181050 26181070 chr3R 26181124 26181172 11 94 3.5 5.5 4.5 2.0 122 chr3R 26181050 intron CG31323 + chr3R 26181111 intron CG31323 + chr3R 26181172 intron CG31323 + chr3R_11_26180001 chr3R_26180001 RAL-406 2512 chr3R 26184985 26185034 chr3R 26185093 26185142 24 107 6.0 5.0 5.5 3.7 157 chr3R 26184985 3` UTR CG31323 + chr3R 26185064 3` UTR CG31323 + chr3R 26185142 3` UTR CG31323 + chr3R_24_26185001 chr3R_26185001 RAL-406 2513 chr3R 26292089 26292134 chr3R 26292183 26292234 14 100 6.5 7.0 6.8 1.8 145 chr3R 26292089 intergenic not near genes chr3R 26292162 intergenic not near genes chr3R 26292234 intergenic not near genes chr3R_14_26290001 chr3R_26290001 RAL-406 2514 chr3R 11004110 11004121 chr3R 26312888 26312888 4 15308770 12.5 12.0 12.2 0.3 15308778 chr3R 11004110 intron CG34114 + chr3R 18658499 intron CG31224 - chr3R 26312888 intergenic not near genes chr3R_4_18655001 chr3R_18655001 RAL-406 2515 chr3R 26365091 26365145 chr3R 26365196 26365244 20 103 6.5 7.5 7.0 2.5 153 chr3R 26365091 intergenic not near genes chr3R 26365168 intergenic not near genes chr3R 26365244 intergenic not near genes chr3R_20_26365001 chr3R_26365001 RAL-406 2516 chr3R 26370321 26370352 chr3R 26370426 26370457 16 105 0.0 5.0 2.5 4.6 136 chr3R 26370321 intergenic not near genes chr3R 26370389 intergenic not near genes chr3R 26370457 intergenic not near genes chr3R_16_26370001 chr3R_26370001 RAL-406 2517 chr3R 26376306 26376358 chr3R 26385486 26385498 roo 12 9166 5.5 1.5 3.5 2.7 9192 chr3R 26376306 intergenic not near genes chr3R 26380902 intergenic not near genes chr3R 26385498 intergenic not near genes chr3R_12_26380001 chr3R_26380001 RAL-406 2518 chr3R 26405907 26405940 chr3R 26405999 26406036 15 93 6.0 6.5 6.2 2.1 129 chr3R 26405907 intergenic not near genes chr3R 26405972 intergenic not near genes chr3R 26406036 intergenic not near genes chr3R_15_26405001 chr3R_26405001 RAL-406 2519 chr3R 26413264 26413300 chr3R 26413366 26413417 9 102 1.5 3.5 2.5 2.6 153 chr3R 26413264 intergenic not near genes chr3R 26413340 intergenic not near genes chr3R 26413417 intergenic not near genes chr3R_9_26410001 chr3R_26410001 RAL-406 2520 chr3R 26463760 26463811 chr3R 26463953 26463976 13 183 1.5 5.5 3.5 2.9 216 chr3R 26463760 intron CG5455 + chr3R 26463868 intron CG5455 + chr3R 26463976 intron CG5455 + chr3R_13_26460001 chr3R_26460001 RAL-406 2521 chr3R 26510497 26510528 chr3R 26519578 26519609 roo 11 9079 5.0 8.0 6.5 1.5 9112 chr3R 26510497 intron plum - chr3R 26515053 intron plum - chr3R 26519609 intron,5` UTR plum -,CR45226 + chr3R_11_26515001 chr3R_26515001 RAL-406 2522 chr3R 26510533 26510533 chr3R 26519568 26519598 roo 4 9050 3.5 5.5 4.5 0.7 9065 chr3R 26510533 intron plum - chr3R 26515066 intron plum - chr3R 26519598 intron,5` UTR plum -,CR45226 + chr3R_4_26515001 chr3R_26515001 RAL-406 2523 chr3R 26611322 26611370 chr3R 26611418 26611442 8 89 4.0 3.0 3.5 1.8 120 chr3R 26611322 intergenic not near genes chr3R 26611382 intergenic not near genes chr3R 26611442 intergenic not near genes chr3R_8_26610001 chr3R_26610001 RAL-406 2524 chr3R 26642717 26642760 chr3R 26643129 26643163 jockey 10 404 7.0 6.5 6.8 1.3 446 chr3R 26642717 intergenic not near genes chr3R 26642940 intergenic not near genes chr3R 26643163 intergenic not near genes chr3R_10_26640001 chr3R_26640001 RAL-406 2525 chr3R 26685855 26685885 chr3R 26686039 26686080 7 193 3.0 1.5 2.2 2.2 225 chr3R 26685855 intergenic not near genes chr3R 26685968 intergenic not near genes chr3R 26686080 intergenic not near genes chr3R_7_26685001 chr3R_26685001 RAL-406 2526 chr3R 26740274 26740308 chr3R 26740370 26740404 8 94 0.0 3.5 1.8 2.9 130 chr3R 26740274 intergenic not near genes chr3R 26740339 intergenic not near genes chr3R 26740404 intergenic not near genes chr3R_8_26740001 chr3R_26740001 RAL-406 2527 chr3R 26770221 26770269 chr3R 26770318 26770366 26 96 4.5 5.0 4.8 4.5 145 chr3R 26770221 intergenic CR45563 + chr3R 26770294 intergenic CR45563 + chr3R 26770366 intergenic not near genes chr3R_26_26770001 chr3R_26770001 RAL-406 2528 chr3R 26771237 26771290 chr3R 26771431 26771449 8 188 5.0 4.5 4.8 1.4 212 chr3R 26771237 intergenic not near genes chr3R 26771343 intergenic not near genes chr3R 26771449 intergenic not near genes chr3R_8_26770001 chr3R_26770001 RAL-406 2529 chr3R 26810537 26810580 chr3R 26811042 26811085 roo 14 501 5.5 4.5 5.0 2.3 548 chr3R 26810537 intron Tl + chr3R 26810811 intron Tl + chr3R 26811085 intron Tl + chr3R_14_26810001 chr3R_26810001 RAL-406 2530 chr3R 26825040 26825091 chr3R 26825136 26825177 19 95 3.5 2.0 2.8 5.0 137 chr3R 26825040 intron Tl + chr3R 26825108 intron Tl + chr3R 26825177 intron Tl + chr3R_19_26825001 chr3R_26825001 RAL-406 2531 chr3R 26827348 26827395 chr3R 26827440 26827473 7 91 2.0 5.0 3.5 1.6 125 chr3R 26827348 intron Tl + chr3R 26827410 intron Tl + chr3R 26827473 intron Tl + chr3R_7_26825001 chr3R_26825001 RAL-406 2532 chr3R 26927294 26927308 chr3R 26927431 26927477 7 149 1.0 4.5 2.8 1.8 183 chr3R 26927294 intron sda + chr3R 26927386 intron sda + chr3R 26927477 intron sda + chr3R_7_26925001 chr3R_26925001 RAL-406 2533 chr3R 27007387 27007435 chr3R 27016542 27016590 roo 23 9149 8.0 7.0 7.5 2.7 9203 chr3R 27007387 intron RYa-R + chr3R 27011988 intron RYa-R + chr3R 27016590 intron RYa-R + chr3R_23_27010001 chr3R_27010001 RAL-406 2534 chr3R 27027660 27027704 chr3R 27027764 27027806 8 101 5.5 2.5 4.0 1.6 146 chr3R 27027660 intron RYa-R + chr3R 27027733 intron RYa-R + chr3R 27027806 intron RYa-R + chr3R_8_27025001 chr3R_27025001 RAL-406 2535 chr3R 27028703 27028756 chr3R 27028802 27028855 17 99 4.5 4.0 4.2 3.3 152 chr3R 27028703 intron RYa-R + chr3R 27028779 intron RYa-R + chr3R 27028855 intron RYa-R + chr3R_17_27025001 chr3R_27025001 RAL-406 2536 chr3R 27030312 27030335 chr3R 27030610 27030644 9 304 3.0 2.5 2.8 2.4 332 chr3R 27030312 intron RYa-R + chr3R 27030478 intron RYa-R + chr3R 27030644 intron RYa-R + chr3R_9_27030001 chr3R_27030001 RAL-406 2537 chr3R 27034769 27034802 chr3R 27034868 27034906 7 101 9.5 6.5 8.0 0.8 137 chr3R 27034769 intron RYa-R + chr3R 27034838 intron RYa-R + chr3R 27034906 intron RYa-R + chr3R_7_27030001 chr3R_27030001 RAL-406 2538 chr3R 27071389 27071441 chr3R 27071725 27071777 8 332 2.0 3.5 2.8 2.1 388 chr3R 27071389 intergenic not near genes chr3R 27071583 intergenic not near genes chr3R 27071777 intergenic not near genes chr3R_8_27070001 chr3R_27070001 RAL-406 2539 chr3R 27101534 27101563 chr3R 27101660 27101683 11 124 0.5 4.5 2.5 3.1 149 chr3R 27101534 exon CG17189 + chr3R 27101608 intron CG17189 + chr3R 27101683 exon CG17189 + chr3R_11_27100001 chr3R_27100001 RAL-406 2540 chr3R 27107160 27107195 chr3R 27107385 27107439 18 237 5.5 4.0 4.8 3.1 279 chr3R 27107160 intergenic not near genes chr3R 27107300 intergenic not near genes chr3R 27107439 intergenic not near genes chr3R_18_27105001 chr3R_27105001 RAL-406 2541 chr3R 27140497 27140510 chr3R 27148127 27148131 412 4 7628 14.5 7.5 11.0 0.3 7634 chr3R 27140497 intron CG6051 - chr3R 27144314 intron CG6051 - chr3R 27148131 intron CG6051 - chr3R_4_27140001 chr3R_27140001 RAL-406 2542 chr3R 27140516 27140548 chr3R 27148124 27148177 412 12 7618 5.5 6.0 5.8 1.8 7661 chr3R 27140516 intron CG6051 - chr3R 27144346 intron CG6051 - chr3R 27148177 intron CG6051 - chr3R_12_27140001 chr3R_27140001 RAL-406 2543 chr3R 27225565 27225611 chr3R 27225676 27225722 9 110 6.5 7.5 7.0 1.1 157 chr3R 27225565 intergenic not near genes chr3R 27225644 intergenic not near genes chr3R 27225722 intergenic not near genes chr3R_9_27225001 chr3R_27225001 RAL-406 2544 chr3R 27245573 27245615 chr3R 27245683 27245694 7 91 4.5 4.0 4.2 1.3 121 chr3R 27245573 intergenic CG18766 - chr3R 27245634 intergenic CG18766 - chr3R 27245694 intergenic CG18766 - chr3R_7_27245001 chr3R_27245001 RAL-406 2545 chr3R 27315974 27316012 chr3R 27316069 27316073 22 88 8.5 3.0 5.8 3.2 99 chr3R 27315974 intron CG3339 - chr3R 27316024 intron CG3339 - chr3R 27316073 intron CG3339 - chr3R_22_27315001 chr3R_27315001 RAL-406 2546 chr3R 27327404 27327458 chr3R 27327503 27327557 15 93 3.0 1.0 2.0 5.0 153 chr3R 27327404 intergenic not near genes chr3R 27327480 intergenic not near genes chr3R 27327557 intergenic not near genes chr3R_15_27325001 chr3R_27325001 RAL-406 2547 chr3R 27335937 27335956 chr3R 27336032 27336057 6 98 2.0 0.0 1.0 3.0 120 chr3R 27335937 intergenic not near genes chr3R 27335997 intergenic not near genes chr3R 27336057 intergenic not near genes chr3R_6_27335001 chr3R_27335001 RAL-406 2548 chr3R 27335957 27335964 chr3R 27336029 27336065 4 90 1.5 0.0 0.8 2.2 108 chr3R 27335957 intergenic not near genes chr3R 27336011 intergenic not near genes chr3R 27336065 intergenic not near genes chr3R_4_27335001 chr3R_27335001 RAL-406 2549 chr3R 27342789 27342805 chr3R 27351383 27351406 Tirant 6 8598 5.5 9.5 7.5 0.7 8617 chr3R 27342789 intron CG42534 + chr3R 27347098 intron CG42534 + chr3R 27351406 intron CG42534 + chr3R_6_27345001 chr3R_27345001 RAL-406 2550 chr3R 27342807 27342823 chr3R 27351372 27351424 Tirant 8 8588 3.5 8.0 5.8 1.2 8617 chr3R 27342807 intron CG42534 + chr3R 27347116 intron CG42534 + chr3R 27351424 intron CG42534 + chr3R_8_27345001 chr3R_27345001 RAL-406 2551 chr3R 27382923 27382939 chr3R 27383529 27383548 4 607 2.0 3.5 2.8 1.1 625 chr3R 27382923 intron side - chr3R 27383236 intron side - chr3R 27383548 intron side - chr3R_4_27380001 chr3R_27380001 RAL-406 2552 chr3R 27452569 27452610 chr3R 27452769 27452804 16 196 2.0 8.5 5.2 2.6 235 chr3R 27452569 intergenic not near genes chr3R 27452686 intergenic not near genes chr3R 27452804 intergenic not near genes chr3R_16_27450001 chr3R_27450001 RAL-406 2553 chr3R 27470038 27470070 chr3R 27470706 27470727 6 668 2.0 1.0 1.5 2.4 689 chr3R 27470038 intergenic not near genes chr3R 27470382 intergenic not near genes chr3R 27470727 intergenic not near genes chr3R_6_27470001 chr3R_27470001 RAL-406 2554 chr3R 27492357 27492405 chr3R 27492464 27492512 12 102 1.5 2.0 1.8 4.3 155 chr3R 27492357 intergenic not near genes chr3R 27492434 intergenic not near genes chr3R 27492512 intergenic not near genes chr3R_12_27490001 chr3R_27490001 RAL-406 2555 chr3R 27496581 27496627 chr3R 27496696 27496732 9 118 7.5 4.0 5.8 1.3 151 chr3R 27496581 intergenic not near genes chr3R 27496656 intergenic not near genes chr3R 27496732 intergenic not near genes chr3R_9_27495001 chr3R_27495001 RAL-406 2556 chr3R 27521136 27521175 chr3R 27530365 27530373 roo 6 9220 7.0 0.5 3.8 1.2 9237 chr3R 27521136 intron CG12885 + chr3R 27525754 intron CG12885 + chr3R 27530373 intron CG12885 + chr3R_6_27525001 chr3R_27525001 RAL-406 2557 chr3R 27686780 27686828 chr3R 27686890 27686933 15 108 6.0 4.5 5.2 2.4 153 chr3R 27686780 intron,intron CG31055 -,CG12880 + chr3R 27686856 intron,intron CG31055 -,CG12880 + chr3R 27686933 intron,intron CG31055 -,CG12880 + chr3R_15_27685001 chr3R_27685001 RAL-406 2558 chr3R 27706764 27706805 chr3R 27706855 27706902 23 93 5.5 9.5 7.5 2.7 138 chr3R 27706764 intergenic CG12428 -,CG12877 + chr3R 27706833 intergenic CG12428 -,CG12877 + chr3R 27706902 intergenic CG12428 -,CG12877 + chr3R_23_27705001 chr3R_27705001 RAL-406 2559 chr3R 27725548 27725592 chr3R 27731010 27731048 I-element 24 5460 10.0 6.0 8.0 2.7 5500 chr3R 27725548 intergenic not near genes chr3R 27728298 intergenic not near genes chr3R 27731048 intergenic not near genes chr3R_24_27725001 chr3R_27725001 RAL-406 2560 chr3R 27799917 27799961 chr3R 27800019 27800063 19 99 1.5 3.0 2.2 5.9 146 chr3R 27799917 intron CG34353 - chr3R 27799990 intron CG34353 - chr3R 27800063 intron CG34353 - chr3R_19_27795001 chr3R_27795001 RAL-406 2561 chr3R 27813798 27813843 chr3R 27813922 27813967 8 116 3.0 2.0 2.5 2.3 169 chr3R 27813798 intron CG34353 - chr3R 27813882 intron CG34353 - chr3R 27813967 intron CG34353 - chr3R_8_27810001 chr3R_27810001 RAL-406 2562 chr3R 27856745 27856785 chr3R 27858248 27858288 hopper2 12 1501 11.0 5.5 8.2 1.3 1543 chr3R 27856745 intron CG34353 - chr3R 27857516 intron CG34353 - chr3R 27858288 intron CG34353 - chr3R_12_27855001 chr3R_27855001 RAL-406 2563 chr3R 27861265 27861289 chr3R 27861361 27861385 4 88 2.0 4.5 3.2 1.0 120 chr3R 27861265 intron CG34353 - chr3R 27861325 intron CG34353 - chr3R 27861385 intron CG34353 - chr3R_4_27860001 chr3R_27860001 RAL-406 2564 chr3R 27862948 27862980 chr3R 27868258 27868305 Transpac 10 5314 4.0 4.0 4.0 2.0 5357 chr3R 27862948 intron CG34353 - chr3R 27865626 intron CG34353 - chr3R 27868305 intron CG34353 - chr3R_10_27865001 chr3R_27865001 RAL-406 2565 chr3R 27875680 27875729 chr3R 27882755 27882804 297 30 7073 3.0 9.5 6.2 4.2 7124 chr3R 27875680 intron CG34353 - chr3R 27879242 intron CG34353 - chr3R 27882804 intron CG34353 - chr3R_30_27875001 chr3R_27875001 RAL-406 2566 chr3R 28042400 28042446 chr3R 28042581 28042627 18 176 5.5 5.5 5.5 2.8 227 chr3R 28042400 intron CG34362 + chr3R 28042514 intron CG34362 + chr3R 28042627 intron CG34362 + chr3R_18_28040001 chr3R_28040001 RAL-406 2567 chr3R 28068490 28068508 chr3R 28073947 28073970 I-element 6 5458 1.5 2.5 2.0 2.0 5480 chr3R 28068490 intron CG34362 + chr3R 28071230 intron CG34362 + chr3R 28073970 intron CG34362 + chr3R_6_28070001 chr3R_28070001 RAL-406 2568 chr3R 28068510 28068530 chr3R 28073936 28073960 I-element 13 5442 1.5 1.5 1.5 5.2 5450 chr3R 28068510 intron CG34362 + chr3R 28071235 intron CG34362 + chr3R 28073960 intron CG34362 + chr3R_13_28070001 chr3R_28070001 RAL-406 2569 chr3R 28118257 28118296 chr3R 28118377 28118397 4 110 2.0 1.5 1.8 1.4 140 chr3R 28118257 intergenic not near genes chr3R 28118327 intergenic not near genes chr3R 28118397 intergenic not near genes chr3R_4_28115001 chr3R_28115001 RAL-406 2570 chr3R 28152344 28152361 chr3R 28152422 28152436 7 90 9.0 8.0 8.5 0.7 92 chr3R 28152344 intron CG34354 + chr3R 28152390 intron CG34354 + chr3R 28152436 intron CG34354 + chr3R_7_28150001 chr3R_28150001 RAL-406 2571 chr3R 28172949 28172990 chr3R 28173126 28173126 8 168 4.0 1.0 2.5 2.3 177 chr3R 28172949 intron CG34354 + chr3R 28173038 intron CG34354 + chr3R 28173126 intron CG34354 + chr3R_8_28170001 chr3R_28170001 RAL-406 2572 chr3R 28173653 28173700 chr3R 28181098 28181148 mdg1 12 7447 4.5 6.5 5.5 1.8 7495 chr3R 28173653 intron CG34354 + chr3R 28177400 intron CG34354 + chr3R 28181148 intron CG34354 + chr3R_12_28175001 chr3R_28175001 RAL-406 2573 chr3R 28215796 28215824 chr3R 28215893 28215921 5 92 5.5 2.5 4.0 1.0 125 chr3R 28215796 intron CG34354 + chr3R 28215858 intron CG34354 + chr3R 28215921 intron CG34354 + chr3R_5_28215001 chr3R_28215001 RAL-406 2574 chr3R 28215831 28215848 chr3R 28215891 28215934 7 82 3.5 2.0 2.8 1.8 103 chr3R 28215831 intron CG34354 + chr3R 28215882 intron CG34354 + chr3R 28215934 intron CG34354 + chr3R_7_28215001 chr3R_28215001 RAL-406 2575 chr3R 28238711 28238761 chr3R 28238862 28238912 17 150 3.5 6.5 5.0 2.8 201 chr3R 28238711 3` UTR CG34354 + chr3R 28238812 3` UTR CG34354 + chr3R 28238912 3` UTR CG34354 + chr3R_17_28235001 chr3R_28235001 RAL-406 2576 chr3R 28253345 28253353 chr3R 28255865 28255883 jockey 5 2528 2.5 3.5 3.0 1.2 2538 chr3R 28253345 intergenic not near genes chr3R 28254614 intergenic not near genes chr3R 28255883 intergenic not near genes chr3R_5_28250001 chr3R_28250001 RAL-406 2577 chr3R 28282981 28283017 chr3R 28283620 28283666 15 647 6.0 9.0 7.5 1.8 685 chr3R 28282981 exon CG34436 + chr3R 28283324 exon CG34436 + chr3R 28283666 intergenic CG34437 +,CG34436 + chr3R_15_28280001 chr3R_28280001 RAL-406 2578 chr3R 28302088 28302099 chr3R 28302547 28302558 jockey 5 459 13.5 6.0 9.8 0.5 470 chr3R 28302088 intergenic not near genes chr3R 28302323 intergenic not near genes chr3R 28302558 intergenic not near genes chr3R_5_28300001 chr3R_28300001 RAL-406 2579 chr3R 28302105 28302129 chr3R 28302538 28302543 jockey 11 452 6.5 5.5 6.0 1.6 438 chr3R 28302105 intergenic not near genes chr3R 28302324 intergenic not near genes chr3R 28302543 intergenic not near genes chr3R_11_28300001 chr3R_28300001 RAL-406 2580 chr3R 28345632 28345675 chr3R 28345728 28345771 9 96 5.0 3.5 4.2 1.7 139 chr3R 28345632 intergenic Moca-cyp + chr3R 28345702 intergenic not near genes chr3R 28345771 intergenic not near genes chr3R_9_28345001 chr3R_28345001 RAL-406 2581 chr3R 28390104 28390145 chr3R 28390190 28390193 18 80 1.0 2.5 1.8 6.4 89 chr3R 28390104 intergenic not near genes chr3R 28390148 intergenic not near genes chr3R 28390193 intergenic not near genes chr3R_18_28390001 chr3R_28390001 RAL-406 2582 chr3R 28393677 28393728 chr3R 28393797 28393848 19 119 6.0 3.5 4.8 3.3 171 chr3R 28393677 intergenic not near genes chr3R 28393762 intergenic not near genes chr3R 28393848 intergenic not near genes chr3R_19_28390001 chr3R_28390001 RAL-406 2583 chr3R 28478401 28478450 chr3R 28478502 28478534 10 92 1.5 3.5 2.5 2.9 133 chr3R 28478401 intergenic not near genes chr3R 28478468 intergenic not near genes chr3R 28478534 intergenic not near genes chr3R_10_28475001 chr3R_28475001 RAL-406 2584 chr3R 28479149 28479167 chr3R 28479237 28479265 10 101 5.5 5.5 5.5 1.5 116 chr3R 28479149 intergenic not near genes chr3R 28479207 intergenic not near genes chr3R 28479265 intergenic not near genes chr3R_10_28475001 chr3R_28475001 RAL-406 2585 chr3R 28484353 28484394 chr3R 28486250 28486291 52 1903 119.0 130.5 124.8 0.4 1938 chr3R 28484353 intergenic CG1894 + chr3R 28485322 exon CG1894 + chr3R 28486291 intergenic CG1894 + chr3R_52_28485001 chr3R_28485001 RAL-406 2586 chr3R 28633177 28633216 chr3R 28633272 28633316 26 98 8.5 4.5 6.5 3.5 139 chr3R 28633177 intron CG10011 - chr3R 28633246 intron CG10011 - chr3R 28633316 intron CG10011 - chr3R_26_28630001 chr3R_28630001 RAL-406 2587 chr3R 28711721 28711772 chr3R 28711830 28711846 22 105 3.5 3.0 3.2 5.2 125 chr3R 28711721 intron htt + chr3R 28711784 intron htt + chr3R 28711846 intron htt + chr3R_22_28710001 chr3R_28710001 RAL-406 2588 chr3R 28712860 28712880 chr3R 28712968 28712984 8 108 13.5 0.0 6.8 1.0 124 chr3R 28712860 intron htt + chr3R 28712922 intron htt + chr3R 28712984 intron htt + chr3R_8_28710001 chr3R_28710001 RAL-406 2589 chr3R 28742479 28742511 chr3R 28742561 28742607 15 94 2.0 4.5 3.2 3.6 128 chr3R 28742479 intron AstA-R2 - chr3R 28742543 intron AstA-R2 - chr3R 28742607 intron AstA-R2 - chr3R_15_28740001 chr3R_28740001 RAL-406 2590 chr3R 28758263 28758281 chr3R 28763900 28763918 roo 6 5637 10.0 0.5 5.2 1.0 5655 chr3R 28758263 intergenic aqrs - chr3R 28761090 intergenic not near genes chr3R 28763918 intergenic not near genes chr3R_6_28760001 chr3R_28760001 RAL-406 2591 chr3R 28758303 28758316 chr3R 28771330 28771343 Stalker4 11 13026 4.0 5.5 4.8 1.9 13040 chr3R 28758303 intergenic aqrs - chr3R 28764823 intergenic not near genes chr3R 28771343 intergenic not near genes chr3R_11_28760001 chr3R_28760001 RAL-406 2592 chr3R 28763902 28763918 chr3R 28771330 28771381 Stalker4 7 7456 0.0 5.5 2.8 1.8 7479 chr3R 28763902 intergenic not near genes chr3R 28767642 intergenic not near genes chr3R 28771381 intergenic not near genes chr3R_7_28765001 chr3R_28765001 RAL-406 2593 chr3R 28792875 28792904 chr3R 28797982 28798009 jockey 9 5104 1.5 3.5 2.5 2.6 5134 chr3R 28792875 intergenic not near genes chr3R 28795442 intergenic not near genes chr3R 28798009 intergenic not near genes chr3R_9_28795001 chr3R_28795001 RAL-406 2594 chr3R 28801214 28801254 chr3R 28801684 28801726 9 471 3.5 4.0 3.8 1.9 512 chr3R 28801214 intergenic not near genes chr3R 28801470 intergenic not near genes chr3R 28801726 intergenic not near genes chr3R_9_28800001 chr3R_28800001 RAL-406 2595 chr3R 28811548 28811601 chr3R 28811714 28811767 9 166 5.0 4.0 4.5 1.6 219 chr3R 28811548 intergenic wdn - chr3R 28811658 intergenic wdn -,CG1646 + chr3R 28811767 intergenic CG1646 +,wdn - chr3R_9_28810001 chr3R_28810001 RAL-406 2596 chr3R 28971146 28971193 chr3R 28971247 28971294 29 100 3.5 6.5 5.0 4.8 148 chr3R 28971146 5` UTR CR45669 + chr3R 28971220 5` UTR CR45669 + chr3R 28971294 5` UTR CR45669 + chr3R_29_28970001 chr3R_28970001 RAL-406 2597 chr3R 28989883 28989933 chr3R 28990078 28990126 5 189 4.0 1.5 2.8 1.3 243 chr3R 28989883 intergenic not near genes chr3R 28990004 intergenic not near genes chr3R 28990126 intergenic not near genes chr3R_5_28990001 chr3R_28990001 RAL-406 2598 chr3R 29032740 29032777 chr3R 29032821 29032826 11 73 3.5 1.0 2.2 3.4 86 chr3R 29032740 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032783 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032826 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R_11_29030001 chr3R_29030001 RAL-406 2599 chr3R 29067591 29067638 chr3R 29067757 29067806 8 164 2.5 0.0 1.2 3.6 215 chr3R 29067591 intron CG11873 + chr3R 29067698 intron CG11873 + chr3R 29067806 intron CG11873 + chr3R_8_29065001 chr3R_29065001 RAL-406 2600 chr3R 29079362 29079371 chr3R 29080754 29080760 NOF 6 1391 10.5 7.0 8.8 0.6 1398 chr3R 29079362 intron CG11873 + chr3R 29080061 intron CG11873 + chr3R 29080760 intron CG11873 + chr3R_6_29080001 chr3R_29080001 RAL-406 2601 chr3R 29079372 29079407 chr3R 29080752 29080784 NOF 14 1386 6.0 7.0 6.5 1.9 1412 chr3R 29079372 intron CG11873 + chr3R 29080078 intron CG11873 + chr3R 29080784 intron CG11873 + chr3R_14_29080001 chr3R_29080001 RAL-406 2602 chr3R 29213040 29213090 chr3R 29213142 29213193 28 99 6.0 6.0 6.0 4.0 153 chr3R 29213040 intergenic not near genes chr3R 29213116 intergenic not near genes chr3R 29213193 intergenic not near genes chr3R_28_29210001 chr3R_29210001 RAL-406 2603 chr3R 29237238 29237536 chr3R 29239269 29239449 16 2021 16.0 6.0 11.0 1.3 2211 chr3R 29237238 exon CG11951 - chr3R 29238344 intron CG11951 - chr3R 29239449 exon CG31427 - chr3R_16_29235001 chr3R_29235001 RAL-406 2604 chr3R 29264183 29264199 chr3R 29264305 29264321 4 118 0.0 4.5 2.2 1.2 138 chr3R 29264183 intergenic not near genes chr3R 29264252 intergenic not near genes chr3R 29264321 intergenic not near genes chr3R_4_29260001 chr3R_29260001 RAL-406 2605 chr3R 29277214 29277262 chr3R 29277800 29277848 18 584 5.0 4.5 4.8 3.1 634 chr3R 29277214 intergenic CR45568 - chr3R 29277531 intergenic CR45568 - chr3R 29277848 intergenic not near genes chr3R_18_29275001 chr3R_29275001 RAL-406 2606 chr3R 29362853 29362884 chr3R 29362957 29362993 12 107 0.0 4.5 2.2 3.8 140 chr3R 29362853 intergenic not near genes chr3R 29362923 intergenic not near genes chr3R 29362993 intergenic not near genes chr3R_12_29360001 chr3R_29360001 RAL-406 2607 chr3R 29376341 29376365 chr3R 29376449 29376455 12 105 8.5 4.0 6.2 1.7 114 chr3R 29376341 intergenic not near genes chr3R 29376398 intergenic not near genes chr3R 29376455 intergenic not near genes chr3R_12_29375001 chr3R_29375001 RAL-406 2608 chr3R 29406614 29406628 chr3R 29407915 29407934 jockey 5 1304 6.0 7.5 6.8 0.6 1320 chr3R 29406614 intron Ptp99A + chr3R 29407274 intron Ptp99A + chr3R 29407934 intron Ptp99A + chr3R_5_29405001 chr3R_29405001 RAL-406 2609 chr3R 29406629 29406644 chr3R 29407906 29407950 jockey 6 1295 4.0 6.5 5.2 1.0 1321 chr3R 29406629 intron Ptp99A + chr3R 29407290 intron Ptp99A + chr3R 29407950 intron Ptp99A + chr3R_6_29405001 chr3R_29405001 RAL-406 2610 chr3R 29472001 29472036 chr3R 29472107 29472109 12 99 3.0 4.5 3.8 2.5 108 chr3R 29472001 intron Ptp99A + chr3R 29472055 intron Ptp99A + chr3R 29472109 intron Ptp99A + chr3R_12_29470001 chr3R_29470001 RAL-406 2611 chr3R 29576733 29576762 chr3R 29576843 29576871 7 116 5.0 0.0 2.5 2.0 138 chr3R 29576733 intergenic not near genes chr3R 29576802 intergenic not near genes chr3R 29576871 intergenic not near genes chr3R_7_29575001 chr3R_29575001 RAL-406 2612 chr3R 29590355 29590404 chr3R 29590468 29590517 14 108 1.5 2.5 2.0 4.7 162 chr3R 29590355 exon CG31041 - chr3R 29590436 intron CG31041 - chr3R 29590517 exon CG31041 - chr3R_14_29590001 chr3R_29590001 RAL-406 2613 chr3R 29624939 29624990 chr3R 29625030 29625085 22 92 6.0 6.0 6.0 3.1 146 chr3R 29624939 intergenic not near genes chr3R 29625012 intergenic not near genes chr3R 29625085 intergenic not near genes chr3R_22_29625001 chr3R_29625001 RAL-406 2614 chr3R 29655631 29655670 chr3R 29655730 29655769 15 97 7.0 5.5 6.2 2.1 138 chr3R 29655631 intron Dop1R2 - chr3R 29655700 intron Dop1R2 - chr3R 29655769 intron Dop1R2 - chr3R_15_29655001 chr3R_29655001 RAL-406 2615 chr3R 29714865 29714895 chr3R 29715014 29715060 4 144 2.5 3.5 3.0 1.0 195 chr3R 29714865 exon Obp99d + chr3R 29714962 3` UTR Obp99d + chr3R 29715060 intergenic Dup99B -,Obp99d + chr3R_4_29710001 chr3R_29710001 RAL-406 2616 chr3R 29738246 29738297 chr3R 29739733 29739774 hobo 21 1480 4.5 3.0 3.8 4.4 1528 chr3R 29738246 intergenic CG1969 +,CG7598 + chr3R 29739010 intron CG1969 + chr3R 29739774 5` UTR CG1969 + chr3R_21_29735001 chr3R_29735001 RAL-406 2617 chr3R 29754945 29754987 chr3R 29755043 29755084 9 97 0.0 5.5 2.8 2.4 139 chr3R 29754945 intergenic CR44953 -,yata + chr3R 29755014 intergenic CR44953 -,yata + chr3R 29755084 intergenic CR44953 - chr3R_9_29755001 chr3R_29755001 RAL-406 2618 chr3R 29758922 29758949 chr3R 29759020 29759047 10 96 8.5 8.0 8.2 1.1 125 chr3R 29758922 3` UTR CR44953 - chr3R 29758984 3` UTR CR44953 - chr3R 29759047 intergenic CR44953 - chr3R_10_29755001 chr3R_29755001 RAL-406 2619 chr3R 29758950 29758970 chr3R 29759016 29759068 15 85 5.0 6.5 5.8 2.2 118 chr3R 29758950 3` UTR CR44953 - chr3R 29759009 3` UTR CR44953 - chr3R 29759068 intergenic CR44953 - chr3R_15_29755001 chr3R_29755001 RAL-406 2620 chr3R 29760340 29760391 chr3R 29761561 29761612 pogo 23 1219 9.0 5.0 7.0 2.9 1272 chr3R 29760340 intergenic not near genes chr3R 29760976 intergenic not near genes chr3R 29761612 intergenic not near genes chr3R_23_29760001 chr3R_29760001 RAL-406 2621 chr3R 29790997 29791017 chr3R 31309183 31309183 4 1518173 4.0 8.0 6.0 0.6 1518186 chr3R 29790997 intron kay + chr3R 30550090 intron tmod + chr3R 31309183 intergenic not near genes chr3R_4_30550001 chr3R_30550001 RAL-406 2622 chr3R 29831809 29831821 chr3R 29831903 29831921 8 101 3.5 1.5 2.5 2.3 112 chr3R 29831809 exon Atg16 - chr3R 29831865 intron Atg16 - chr3R 29831921 exon Atg16 - chr3R_8_29830001 chr3R_29830001 RAL-406 2623 chr3R 29882003 29882041 chr3R 29891180 29891218 roo 14 9177 8.5 5.0 6.8 1.8 9215 chr3R 29882003 intron CG31038 + chr3R 29886610 intron CG31038 + chr3R 29891218 intron CG31038 + chr3R_14_29885001 chr3R_29885001 RAL-406 2624 chr3R 29882042 29882053 chr3R 29891174 29891205 roo 8 9167 5.0 5.0 5.0 1.3 9163 chr3R 29882042 intron CG31038 + chr3R 29886624 intron CG31038 + chr3R 29891205 intron CG31038 + chr3R_8_29885001 chr3R_29885001 RAL-406 2625 chr3R 29986071 29986094 chr3R 29986144 29986193 8 92 1.0 1.5 1.2 3.6 122 chr3R 29986071 exon CG7896 + chr3R 29986132 intron CG7896 + chr3R 29986193 intron CG7896 + chr3R_8_29985001 chr3R_29985001 RAL-406 2626 chr3R 30032140 30032190 chr3R 30032239 30032253 11 88 4.0 8.5 6.2 1.5 113 chr3R 30032140 intron Axn + chr3R 30032196 intron Axn + chr3R 30032253 intron Axn + chr3R_11_30030001 chr3R_30030001 RAL-406 2627 chr3R 30084837 30084881 chr3R 30086316 30086368 hobo 11 1477 2.0 2.0 2.0 3.7 1531 chr3R 30084837 intron sima + chr3R 30085602 intron sima + chr3R 30086368 intron sima + chr3R_11_30085001 chr3R_30085001 RAL-406 2628 chr3R 30088612 30088641 chr3R 30088718 30088748 9 105 0.0 3.5 1.8 3.2 136 chr3R 30088612 intron sima + chr3R 30088680 intron sima + chr3R 30088748 intron sima + chr3R_9_30085001 chr3R_30085001 RAL-406 2629 chr3R 30182752 30182787 chr3R 30182894 30182946 13 151 2.0 5.5 3.8 2.7 194 chr3R 30182752 intergenic not near genes chr3R 30182849 intergenic not near genes chr3R 30182946 intergenic not near genes chr3R_13_30180001 chr3R_30180001 RAL-406 2630 chr3R 30210597 30210674 chr3R 30210730 30210774 7 102 0.0 5.0 2.5 2.0 177 chr3R 30210597 intergenic Anp +,CecA1 + chr3R 30210686 intergenic CecA1 +,Anp + chr3R 30210774 intergenic CecA1 +,Anp + chr3R_7_30210001 chr3R_30210001 RAL-406 2631 chr3R 30238740 30238792 chr3R 30239926 30239976 1360 18 1183 0.0 5.5 2.8 4.7 1236 chr3R 30238740 intergenic not near genes chr3R 30239358 intergenic not near genes chr3R 30239976 intergenic not near genes chr3R_18_30235001 chr3R_30235001 RAL-406 2632 chr3R 30289095 30289133 chr3R 30289205 30289243 11 108 4.5 7.0 5.8 1.6 148 chr3R 30289095 intron hdc + chr3R 30289169 intron hdc + chr3R 30289243 intron hdc + chr3R_11_30285001 chr3R_30285001 RAL-406 2633 chr3R 30300710 30300744 chr3R 30300809 30300815 9 94 5.0 3.5 4.2 1.7 105 chr3R 30300710 intron hdc + chr3R 30300762 intron hdc + chr3R 30300815 intron hdc + chr3R_9_30300001 chr3R_30300001 RAL-406 2634 chr3R 30317325 30317359 chr3R 30324915 30324971 roo 10 7597 0.5 3.5 2.0 3.3 7646 chr3R 30317325 intron hdc + chr3R 30321148 intron hdc + chr3R 30324971 intron hdc + chr3R_10_30320001 chr3R_30320001 RAL-406 2635 chr3R 30332012 30332057 chr3R 30332109 30332137 10 94 2.5 1.0 1.8 3.6 125 chr3R 30332012 intron hdc + chr3R 30332074 intron hdc + chr3R 30332137 intron hdc + chr3R_10_30330001 chr3R_30330001 RAL-406 2636 chr3R 30375531 30375569 chr3R 30383174 30383212 412 7 7640 4.5 5.5 5.0 1.2 7681 chr3R 30375531 intergenic not near genes chr3R 30379372 intergenic not near genes chr3R 30383212 intergenic not near genes chr3R_7_30375001 chr3R_30375001 RAL-406 2637 chr3R 30385635 30385653 chr3R 30385716 30385723 8 88 9.5 5.0 7.2 1.0 88 chr3R 30385635 3` UTR Fer1HCH - chr3R 30385679 3` UTR Fer1HCH - chr3R 30385723 3` UTR Fer1HCH - chr3R_8_30385001 chr3R_30385001 RAL-406 2638 chr3R 30385659 30385663 chr3R 30385715 30385723 5 66 6.0 5.0 5.5 0.8 64 chr3R 30385659 3` UTR Fer1HCH - chr3R 30385691 3` UTR Fer1HCH - chr3R 30385723 3` UTR Fer1HCH - chr3R_5_30385001 chr3R_30385001 RAL-406 2639 chr3R 30396199 30396243 chr3R 30404485 30404522 roo 15 8282 6.5 3.5 5.0 2.5 8323 chr3R 30396199 intergenic not near genes chr3R 30400360 intergenic not near genes chr3R 30404522 5` UTR CR45570 + chr3R_15_30400001 chr3R_30400001 RAL-406 2640 chr3R 30456374 30456425 chr3R 30456474 30456515 10 97 5.0 4.5 4.8 1.7 141 chr3R 30456374 intergenic CG2224 - chr3R 30456444 3` UTR CG2224 - chr3R 30456515 3` UTR CG2224 - chr3R_10_30455001 chr3R_30455001 RAL-406 2641 chr3R 30457995 30458048 chr3R 30458095 30458148 20 99 3.0 7.5 5.2 3.2 153 chr3R 30457995 intron CG2224 - chr3R 30458072 intron CG2224 - chr3R 30458148 intron CG2224 - chr3R_20_30455001 chr3R_30455001 RAL-406 2642 chr3R 30480455 30480511 chr3R 30482942 30482966 jockey 16 2478 2.0 5.5 3.8 3.3 2511 chr3R 30480455 intron PH4alphaEFB + chr3R 30481710 intron PH4alphaEFB + chr3R 30482966 intron PH4alphaEFB + chr3R_16_30480001 chr3R_30480001 RAL-406 2643 chr3R 30488103 30488122 chr3R 30488202 30488221 11 99 6.5 0.0 3.2 2.6 118 chr3R 30488103 intergenic Jon99Fii - chr3R 30488162 intergenic Jon99Fii - chr3R 30488221 intergenic Jon99Fii - chr3R_11_30485001 chr3R_30485001 RAL-406 2644 chr3R 30498406 30498434 chr3R 30498615 30498654 15 216 0.5 6.5 3.5 3.3 248 chr3R 30498406 intron PH4alphaNE1 - chr3R 30498530 intron PH4alphaNE1 - chr3R 30498654 intron PH4alphaNE1 - chr3R_15_30495001 chr3R_30495001 RAL-406 2645 chr3R 30544719 30544757 chr3R 30544830 30544867 9 110 6.5 4.0 5.2 1.5 148 chr3R 30544719 intron tmod + chr3R 30544793 intron tmod + chr3R 30544867 intron tmod + chr3R_9_30540001 chr3R_30540001 RAL-406 2646 chr3R 30679514 30679552 chr3R 30686987 30687022 blood 9 7478 1.5 5.5 3.5 2.0 7508 chr3R 30679514 intergenic not near genes chr3R 30683268 intergenic not near genes chr3R 30687022 intergenic not near genes chr3R_9_30680001 chr3R_30680001 RAL-406 2647 chr3R 30774730 30774763 chr3R 30774980 30775013 11 248 2.0 4.5 3.2 2.6 283 chr3R 30774730 intron zfh1 + chr3R 30774872 intron zfh1 + chr3R 30775013 intron zfh1 + chr3R_11_30770001 chr3R_30770001 RAL-406 2648 chr3R 30818791 30818835 chr3R 30820375 30820420 1360 18 1583 9.0 8.5 8.8 1.8 1629 chr3R 30818791 intron cindr + chr3R 30819606 intron cindr + chr3R 30820420 intron cindr + chr3R_18_30815001 chr3R_30815001 RAL-406 2649 chr3R 30821409 30821418 chr3R 30821516 30821525 4 107 2.5 11.0 6.8 0.5 116 chr3R 30821409 intron cindr + chr3R 30821467 intron cindr + chr3R 30821525 intron cindr + chr3R_4_30820001 chr3R_30820001 RAL-406 2650 chr3R 30845064 30845077 chr3R 30845162 30845175 5 98 13.0 0.0 6.5 0.7 111 chr3R 30845064 intergenic not near genes chr3R 30845120 intergenic not near genes chr3R 30845175 intergenic not near genes chr3R_5_30845001 chr3R_30845001 RAL-406 2651 chr3R 30850223 30850270 chr3R 30850335 30850382 18 108 3.0 5.5 4.2 3.5 159 chr3R 30850223 intergenic not near genes chr3R 30850302 intergenic not near genes chr3R 30850382 intergenic not near genes chr3R_18_30850001 chr3R_30850001 RAL-406 2652 chr3R 30888922 30888944 chr3R 30893429 30893475 16 4513 30.0 47.5 38.8 0.4 4553 chr3R 30888922 exon Sap-r - chr3R 30891198 intergenic not near genes chr3R 30893475 intergenic not near genes chr3R_16_30890001 chr3R_30890001 RAL-406 2653 chr3R 30900507 30900553 chr3R 30900607 30900642 11 97 5.0 4.5 4.8 1.9 135 chr3R 30900507 exon Cyp4c3 + chr3R 30900574 3` UTR Cyp4c3 + chr3R 30900642 3` UTR Cyp4c3 + chr3R_11_30900001 chr3R_30900001 RAL-406 2654 chr3R 30948081 30948105 chr3R 30948267 30948291 6 198 1.5 1.0 1.2 2.7 210 chr3R 30948081 intergenic not near genes chr3R 30948186 intergenic not near genes chr3R 30948291 intergenic not near genes chr3R_6_30945001 chr3R_30945001 RAL-406 2655 chr3R 30973111 30973167 chr3R 30973292 30973330 15 178 4.0 1.0 2.5 4.3 219 chr3R 30973111 intron 5-HT7 - chr3R 30973220 intron 5-HT7 - chr3R 30973330 intron 5-HT7 - chr3R_15_30970001 chr3R_30970001 RAL-406 2656 chr3R 31042089 31042142 chr3R 31042196 31042249 27 106 5.0 5.5 5.2 4.4 160 chr3R 31042089 intron CanA1 + chr3R 31042169 intron CanA1 + chr3R 31042249 intron CanA1 + chr3R_27_31040001 chr3R_31040001 RAL-406 2657 chr3R 31069624 31069675 chr3R 31069739 31069741 16 108 2.0 1.5 1.8 5.7 117 chr3R 31069624 intron Sox100B + chr3R 31069682 intron Sox100B + chr3R 31069741 intron Sox100B + chr3R_16_31065001 chr3R_31065001 RAL-406 2658 chr3R 31074212 31074257 chr3R 31081827 31081875 springer 14 7612 5.5 5.0 5.2 2.3 7663 chr3R 31074212 intron Sox100B + chr3R 31078044 intron Sox100B + chr3R 31081875 intron Sox100B + chr3R_14_31075001 chr3R_31075001 RAL-406 2659 chr3R 31087096 31087132 chr3R 31087612 31087635 20 518 1.5 1.0 1.2 9.1 539 chr3R 31087096 intergenic not near genes chr3R 31087366 intergenic not near genes chr3R 31087635 intergenic not near genes chr3R_20_31085001 chr3R_31085001 RAL-406 2660 chr3R 31137137 31137183 chr3R 31137237 31137283 11 97 6.5 5.0 5.8 1.6 146 chr3R 31137137 intron Gycbeta100B + chr3R 31137210 intron Gycbeta100B + chr3R 31137283 intron Gycbeta100B + chr3R_11_31135001 chr3R_31135001 RAL-406 2661 chr3R 31279352 31279397 chr3R 31285563 31285607 diver 10 6203 3.5 3.0 3.2 2.4 6255 chr3R 31279352 intergenic not near genes chr3R 31282480 intergenic not near genes chr3R 31285607 intergenic not near genes chr3R_10_31280001 chr3R_31280001 RAL-406 2662 chr3R 31295341 31295376 chr3R 31295447 31295476 7 94 2.0 2.0 2.0 2.3 135 chr3R 31295341 intergenic not near genes chr3R 31295408 intergenic not near genes chr3R 31295476 intergenic not near genes chr3R_7_31295001 chr3R_31295001 RAL-406 2663 chr3R 31412701 31412742 chr3R 31412799 31412836 10 98 2.5 7.5 5.0 1.7 135 chr3R 31412701 intron Gprk2 + chr3R 31412768 intron Gprk2 + chr3R 31412836 intron Gprk2 + chr3R_10_31410001 chr3R_31410001 RAL-406 2664 chr3R 31413073 31413119 chr3R 31418293 31418314 copia 10 5208 2.0 1.5 1.8 3.6 5241 chr3R 31413073 intron Gprk2 + chr3R 31415694 intron Gprk2 + chr3R 31418314 intron Gprk2 + chr3R_10_31415001 chr3R_31415001 RAL-406 2665 chr3R 31424997 31425026 chr3R 31425088 31425098 4 82 1.0 2.0 1.5 1.6 101 chr3R 31424997 intron Gprk2 + chr3R 31425048 intron Gprk2 + chr3R 31425098 intron Gprk2 + chr3R_4_31425001 chr3R_31425001 RAL-406 2666 chr3R 31426876 31426913 chr3R 31426968 31426995 20 104 5.0 6.5 5.8 2.9 119 chr3R 31426876 intron Gprk2 + chr3R 31426936 intron Gprk2 + chr3R 31426995 intron Gprk2 + chr3R_20_31425001 chr3R_31425001 RAL-406 2667 chr3R 31435342 31435357 chr3R 31435514 31435519 7 170 15.0 6.5 10.8 0.6 177 chr3R 31435342 intron Gprk2 + chr3R 31435430 intron Gprk2 + chr3R 31435519 intron Gprk2 + chr3R_7_31435001 chr3R_31435001 RAL-406 2668 chr3R 31435358 31435391 chr3R 31435513 31435562 18 164 4.5 6.5 5.5 2.8 204 chr3R 31435358 intron Gprk2 + chr3R 31435460 intron Gprk2 + chr3R 31435562 intron Gprk2 + chr3R_18_31435001 chr3R_31435001 RAL-406 2669 chr3R 31477365 31477383 chr3R 31477535 31477571 13 181 6.5 1.5 4.0 2.6 206 chr3R 31477365 intergenic not near genes chr3R 31477468 intergenic not near genes chr3R 31477571 intergenic not near genes chr3R_13_31475001 chr3R_31475001 RAL-406 2670 chr3R 31493468 31493482 chr3R 31493551 31493580 6 94 1.5 4.5 3.0 1.5 112 chr3R 31493468 intergenic not near genes chr3R 31493524 intergenic not near genes chr3R 31493580 intergenic not near genes chr3R_6_31490001 chr3R_31490001 RAL-406 2671 chr3R 31530842 31530845 chr3R 31531144 31531146 4 304 3.0 3.0 3.0 1.0 304 chr3R 31530842 intergenic not near genes chr3R 31530994 intergenic not near genes chr3R 31531146 intergenic not near genes chr3R_4_31530001 chr3R_31530001 RAL-406 2672 chr3R 31536031 31536064 chr3R 31536533 31536570 9 509 1.5 5.0 3.2 2.1 539 chr3R 31536031 intergenic not near genes chr3R 31536300 intergenic not near genes chr3R 31536570 intergenic not near genes chr3R_9_31535001 chr3R_31535001 RAL-406 2673 chr3R 31538472 31538522 chr3R 31538569 31538599 24 94 2.0 5.0 3.5 5.3 127 chr3R 31538472 intergenic not near genes chr3R 31538536 intergenic not near genes chr3R 31538599 intergenic not near genes chr3R_24_31535001 chr3R_31535001 RAL-406 2674 chr3R 31610097 31610146 chr3R 31610203 31610236 24 103 5.5 6.0 5.8 3.5 139 chr3R 31610097 intron CycG - chr3R 31610166 intron CycG - chr3R 31610236 intron CycG - chr3R_24_31610001 chr3R_31610001 RAL-406 2675 chr3R 31691540 31691561 chr3R 31696301 31696347 Doc 6 4768 2.0 6.0 4.0 1.2 4807 chr3R 31691540 intergenic not near genes chr3R 31693944 intergenic not near genes chr3R 31696347 intergenic not near genes chr3R_6_31690001 chr3R_31690001 RAL-406 2676 chr3R 31823593 31823622 chr3R 31823866 31823895 5 273 4.5 4.0 4.2 1.0 302 chr3R 31823593 intron RhoGAP100F + chr3R 31823744 intron RhoGAP100F + chr3R 31823895 intron RhoGAP100F + chr3R_5_31820001 chr3R_31820001 RAL-406 2677 chr3R 31858199 31858439 chr3R 31858296 31858546 5 100 3.5 6.0 4.8 0.9 347 chr3R 31858199 intron heph - chr3R 31858372 intron heph - chr3R 31858546 intron heph - chr3R_5_31855001 chr3R_31855001 RAL-406 2678 chr3R 31911660 31911712 chr3R 31911766 31911771 12 93 2.0 6.5 4.2 2.3 111 chr3R 31911660 intron heph - chr3R 31911716 intron heph - chr3R 31911771 intron heph - chr3R_12_31910001 chr3R_31910001 RAL-406 2679 chr3R 31931174 31931208 chr3R 31931277 31931310 10 103 5.0 3.5 4.2 1.9 136 chr3R 31931174 intron heph - chr3R 31931242 intron heph - chr3R 31931310 intron heph - chr3R_10_31930001 chr3R_31930001 RAL-406 2680 chr3R 31946004 31946048 chr3R 31946113 31946136 8 98 5.5 9.0 7.2 1.0 132 chr3R 31946004 intron heph - chr3R 31946070 intron heph - chr3R 31946136 intron heph - chr3R_8_31945001 chr3R_31945001 RAL-406 2681 chr3R 31954016 31954024 chr3R 31954107 31954119 4 94 8.5 4.5 6.5 0.5 103 chr3R 31954016 intron heph - chr3R 31954068 intron heph - chr3R 31954119 intron heph - chr3R_4_31950001 chr3R_31950001 RAL-406 2682 chr3R 31957961 31958016 chr3R 31958063 31958102 12 99 1.5 6.5 4.0 2.4 141 chr3R 31957961 intron heph - chr3R 31958032 intron heph - chr3R 31958102 intron heph - chr3R_12_31955001 chr3R_31955001 RAL-406 2683 chr3R 31978541 31978586 chr3R 31978750 31978795 5 208 2.5 2.5 2.5 1.4 254 chr3R 31978541 intron,intron heph -,CG2003 + chr3R 31978668 intron,intron heph -,CG2003 + chr3R 31978795 intron,intron heph -,CG2003 + chr3R_5_31975001 chr3R_31975001 RAL-406 2684 chr3R 31997983 31998021 chr3R 32005463 32005511 blood 18 7484 3.5 7.5 5.5 2.8 7528 chr3R 31997983 intron heph - chr3R 32001747 intron heph - chr3R 32005511 intron heph - chr3R_18_32000001 chr3R_32000001 RAL-406 2685 chr4 76483 76505 chr4 81936 81965 I-element 4 5460 9.0 4.5 6.8 0.5 5482 chr4 76483 intron pan + chr4 79224 intron pan + chr4 81965 intron pan + chr4_4_75001 chr4_75001 RAL-406 2686 chr4 102313 102363 chr4 102412 102462 24 95 5.5 5.0 5.2 3.9 149 chr4 102313 intron pan + chr4 102388 intron pan + chr4 102462 intron pan + chr4_24_100001 chr4_100001 RAL-406 2687 chr4 319970 320018 chr4 328166 328214 Stalker2 17 8193 7.5 5.0 6.2 2.4 8244 chr4 319970 3` UTR CG32850 + chr4 324092 intron CG32850 + chr4 328214 3` UTR,3` UTR CG32850 +,PMCA - chr4_17_320001 chr4_320001 RAL-406 2688 chr4 419463 419510 chr4 419674 419721 4 211 54.0 31.0 42.5 0.1 258 chr4 419463 intergenic not near genes chr4 419592 intergenic not near genes chr4 419721 intergenic not near genes chr4_4_415001 chr4_415001 RAL-406 2689 chr4 671585 671634 chr4 680187 680191 Tirant 13 8595 5.5 9.0 7.2 1.6 8606 chr4 671585 intron CG11360 + chr4 675888 intron CG11360 + chr4 680191 intron CG11360 + chr4_13_675001 chr4_675001 RAL-406 2690 chr4 896788 896813 chr4 896886 896911 8 97 8.0 6.0 7.0 1.0 123 chr4 896788 intron unc-13 - chr4 896850 intron unc-13 - chr4 896911 intron unc-13 - chr4_8_895001 chr4_895001 RAL-406 2691 chr4 1135887 1135892 chr4 1136243 1136248 INE-1 4 356 39.0 21.5 30.2 0.1 361 chr4 1135887 3` UTR CG11155 + chr4 1136068 3` UTR CG11155 + chr4 1136248 3` UTR CG11155 + chr4_4_1135001 chr4_1135001 RAL-406 2692 chr4 1231212 1231257 chr4 1231364 1231409 12 152 6.0 3.0 4.5 2.2 197 chr4 1231212 intron Caps + chr4 1231310 intron Caps + chr4 1231409 intron Caps + chr4_12_1230001 chr4_1230001 RAL-406 2693 chrX 288632 288680 chrX 288750 288776 18 115 5.5 7.5 6.5 2.4 144 chrX 288632 intron,intron CG3777 +,CG13375 - chrX 288704 intron,intron CG3777 +,CG13375 - chrX 288776 intron,intron CG3777 +,CG13375 - chrX_18_285001 chrX_285001 RAL-406 2694 chrX 295837 295881 chrX 303477 303521 412 11 7637 2.0 3.0 2.5 3.1 7684 chrX 295837 intron CG3777 + chrX 299679 intron CG3777 + chrX 303521 intron CG3777 + chrX_11_295001 chrX_295001 RAL-406 2695 chrX 318454 318496 chrX 323560 323602 flea 20 5104 4.0 6.5 5.2 3.2 5148 chrX 318454 intron,intron CG3777 +,CG32816 - chrX 321028 intron,intron CG3777 +,CG32816 - chrX 323602 intron,intron CG3777 +,CG32816 - chrX_20_320001 chrX_320001 RAL-406 2696 chrX 388247 388291 chrX 390574 390624 16 2329 16.0 37.5 26.8 0.6 2377 chrX 388247 intron CG32816 - chrX 389436 intron CG32816 - chrX 390624 intron CG32816 - chrX_16_385001 chrX_385001 RAL-406 2697 chrX 428411 428448 chrX 434606 434653 3S18 16 6201 7.5 5.5 6.5 2.1 6242 chrX 428411 intron CG32816 - chrX 431532 intron CG32816 - chrX 434653 intron CG32816 - chrX_16_430001 chrX_430001 RAL-406 2698 chrX 494591 494635 chrX 494698 494711 14 104 2.5 8.5 5.5 2.2 120 chrX 494591 intergenic CG17778 + chrX 494651 5` UTR CG17778 + chrX 494711 5` UTR CG17778 + chrX_14_490001 chrX_490001 RAL-406 2699 chrX 812256 812271 chrX 817907 817922 297 5 5651 10.0 6.5 8.2 0.5 5666 chrX 812256 intron CG43867 - chrX 815089 intron CG43867 - chrX 817922 intron CG43867 - chrX_5_815001 chrX_815001 RAL-406 2700 chrX 812273 812295 chrX 817903 817945 297 7 5644 6.0 6.0 6.0 1.0 5672 chrX 812273 intron CG43867 - chrX 815109 intron CG43867 - chrX 817945 intron CG43867 - chrX_7_815001 chrX_815001 RAL-406 2701 chrX 827601 827632 chrX 835393 835436 roo 11 7806 5.0 4.0 4.5 2.0 7835 chrX 827601 intron CG43867 - chrX 831518 intron CG43867 - chrX 835436 intron CG43867 - chrX_11_830001 chrX_830001 RAL-406 2702 chrX 906688 906724 chrX 908497 908533 S-element 14 1806 4.5 5.5 5.0 2.3 1845 chrX 906688 intron CG43867 - chrX 907610 intron CG43867 - chrX 908533 intron CG43867 - chrX_14_905001 chrX_905001 RAL-406 2703 chrX 1051058 1051089 chrX 1051151 1051187 9 92 5.5 9.0 7.2 1.1 129 chrX 1051058 intron CR44779 + chrX 1051122 intron CR44779 + chrX 1051187 intron CR44779 + chrX_9_1050001 chrX_1050001 RAL-406 2704 chrX 1151766 1151806 chrX 1152051 1152080 10 278 6.0 4.0 5.0 1.7 314 chrX 1151766 intergenic not near genes chrX 1151923 intergenic not near genes chrX 1152080 intergenic not near genes chrX_10_1150001 chrX_1150001 RAL-406 2705 chrX 1229655 1229691 chrX 1229744 1229791 12 94 1.5 2.5 2.0 4.0 136 chrX 1229655 intron CG3638 - chrX 1229723 intron CG3638 - chrX 1229791 intron CG3638 - chrX_12_1225001 chrX_1225001 RAL-406 2706 chrX 1253742 1253763 chrX 1253818 1253865 11 89 2.0 2.5 2.2 3.4 123 chrX 1253742 intron Atf3 - chrX 1253804 intron Atf3 - chrX 1253865 intron Atf3 - chrX_11_1250001 chrX_1250001 RAL-406 2707 chrX 1357757 1357794 chrX 1367947 1367984 Doc 13 10187 7.5 4.5 6.0 1.9 10227 chrX 1357757 intergenic png - chrX 1362870 intergenic not near genes chrX 1367984 intergenic not near genes chrX_13_1360001 chrX_1360001 RAL-406 2708 chrX 1518025 1518070 chrX 1523447 1523492 jockey 5 5416 3.5 10.5 7.0 0.6 5467 chrX 1518025 intergenic inc + chrX 1520758 intergenic not near genes chrX 1523492 intergenic not near genes chrX_5_1520001 chrX_1520001 RAL-406 2709 chrX 1559912 1559942 chrX 1560006 1560042 4 99 7.5 4.0 5.8 0.6 130 chrX 1559912 intron Mur2B - chrX 1559977 intron Mur2B - chrX 1560042 intron Mur2B - chrX_4_1555001 chrX_1555001 RAL-406 2710 chrX 1627970 1627999 chrX 1635441 1635454 gtwin 7 7477 1.5 1.0 1.2 3.2 7484 chrX 1627970 intron,intron Mur2B -,br + chrX 1631712 intron,intron Mur2B -,br + chrX 1635454 intron,intron Mur2B -,br + chrX_7_1630001 chrX_1630001 RAL-406 2711 chrX 1930546 1930568 chrX 1938107 1938159 opus 9 7580 3.5 6.0 4.8 1.6 7613 chrX 1930546 intergenic CG11596 + chrX 1934352 intergenic not near genes chrX 1938159 3` UTR CG3857 - chrX_9_1930001 chrX_1930001 RAL-406 2712 chrX 2023936 2023988 chrX 2024077 2024126 13 134 34.5 35.5 35.0 0.4 190 chrX 2023936 3` UTR,3` UTR east +,Actn - chrX 2024031 3` UTR,3` UTR east +,Actn - chrX 2024126 3` UTR,3` UTR east +,Actn - chrX_13_2020001 chrX_2020001 RAL-406 2713 chrX 2394275 2394307 chrX 2394365 2394409 4 97 1.5 3.5 2.5 1.1 134 chrX 2394275 intergenic not near genes chrX 2394342 intergenic not near genes chrX 2394409 intergenic not near genes chrX_4_2390001 chrX_2390001 RAL-406 2714 chrX 2399848 2399865 chrX 2408201 2408233 roo 5 8367 2.0 7.0 4.5 0.9 8385 chrX 2399848 intergenic not near genes chrX 2404040 intergenic not near genes chrX 2408233 intergenic not near genes chrX_5_2400001 chrX_2400001 RAL-406 2715 chrX 2429650 2429667 chrX 2429746 2429768 8 98 0.0 4.5 2.2 2.5 118 chrX 2429650 intergenic not near genes chrX 2429709 intergenic not near genes chrX 2429768 intergenic not near genes chrX_8_2425001 chrX_2425001 RAL-406 2716 chrX 2517836 2517875 chrX 2517927 2517972 10 95 4.5 2.5 3.5 2.2 136 chrX 2517836 intron trol - chrX 2517904 intron trol - chrX 2517972 intron trol - chrX_10_2515001 chrX_2515001 RAL-406 2717 chrX 2525479 2525504 chrX 2525556 2525589 6 89 2.0 7.5 4.8 1.0 110 chrX 2525479 intron trol - chrX 2525534 intron trol - chrX 2525589 intron trol - chrX_6_2525001 chrX_2525001 RAL-406 2718 chrX 2559353 2559384 chrX 2559447 2559492 12 106 4.0 2.0 3.0 3.0 139 chrX 2559353 intron Pdfr + chrX 2559422 intron Pdfr + chrX 2559492 intron Pdfr + chrX_12_2555001 chrX_2555001 RAL-406 2719 chrX 2568200 2568223 chrX 2568445 2568480 9 248 4.0 2.0 3.0 2.2 280 chrX 2568200 intron Pdfr + chrX 2568340 intron Pdfr + chrX 2568480 intron Pdfr + chrX_9_2565001 chrX_2565001 RAL-406 2720 chrX 2578816 2578842 chrX 2578900 2578919 4 90 4.0 3.0 3.5 0.9 103 chrX 2578816 intergenic Pdfr +,Vha36-3 - chrX 2578868 intergenic Vha36-3 -,Pdfr + chrX 2578919 intergenic Vha36-3 -,Pdfr + chrX_4_2575001 chrX_2575001 RAL-406 2721 chrX 2610372 2610416 chrX 2617509 2617550 HMS-Beagle 4 7136 4.5 7.0 5.8 0.6 7178 chrX 2610372 intergenic CG8636 - chrX 2613961 intergenic not near genes chrX 2617550 intergenic Tsp3A - chrX_4_2610001 chrX_2610001 RAL-406 2722 chrX 2758044 2758071 chrX 2758128 2758157 4 82 3.5 3.0 3.2 1.0 113 chrX 2758044 intron kirre + chrX 2758100 intron kirre + chrX 2758157 intron kirre + chrX_4_2755001 chrX_2755001 RAL-406 2723 chrX 2807343 2807385 chrX 2807458 2807500 12 115 5.5 2.5 4.0 2.4 157 chrX 2807343 intron kirre + chrX 2807422 intron kirre + chrX 2807500 intron kirre + chrX_12_2805001 chrX_2805001 RAL-406 2724 chrX 2844884 2844930 chrX 2852314 2852344 mdg1 9 7427 3.0 4.0 3.5 2.0 7460 chrX 2844884 intron kirre + chrX 2848614 intron kirre + chrX 2852344 intron kirre + chrX_9_2845001 chrX_2845001 RAL-406 2725 chrX 2888101 2888140 chrX 2888199 2888206 5 89 5.5 4.0 4.8 0.9 105 chrX 2888101 intron kirre + chrX 2888154 intron kirre + chrX 2888206 intron kirre + chrX_5_2885001 chrX_2885001 RAL-406 2726 chrX 2893728 2893773 chrX 2894820 2894845 5 1090 22.0 19.0 20.5 0.2 1117 chrX 2893728 intron,exon kirre +,CG3526 + chrX 2894286 intron kirre + chrX 2894845 intron kirre + chrX_5_2890001 chrX_2890001 RAL-406 2727 chrX 3058005 3058047 chrX 3058266 3058308 pogo 9 259 7.5 4.0 5.8 1.3 303 chrX 3058005 intron kirre + chrX 3058156 intron kirre + chrX 3058308 intron kirre + chrX_9_3055001 chrX_3055001 RAL-406 2728 chrX 3109425 3109476 chrX 3109522 3109522 18 90 6.0 3.5 4.8 3.1 97 chrX 3109425 intron kirre + chrX 3109474 intron kirre + chrX 3109522 intron kirre + chrX_18_3105001 chrX_3105001 RAL-406 2729 chrX 3218486 3218539 chrX 3227655 3227708 roo 7 9169 2.0 6.0 4.0 1.4 9222 chrX 3218486 intron dnc + chrX 3223097 intron dnc + chrX 3227708 intron dnc + chrX_7_3220001 chrX_3220001 RAL-406 2730 chrX 3351795 3351812 chrX 3351901 3351918 4 105 6.5 8.5 7.5 0.5 123 chrX 3351795 intergenic not near genes chrX 3351856 intergenic not near genes chrX 3351918 intergenic not near genes chrX_4_3350001 chrX_3350001 RAL-406 2731 chrX 3405409 3405455 chrX 3406042 3406088 25 627 5.0 3.5 4.2 4.8 679 chrX 3405409 intron,intron CR44999 +,CG12535 - chrX 3405748 intron,intron CR44999 +,CG12535 - chrX 3406088 intron,intron CR44999 +,CG12535 - chrX_25_3405001 chrX_3405001 RAL-406 2732 chrX 3415022 3415050 chrX 3421207 3421255 3S18 15 6200 0.5 7.0 3.8 3.1 6233 chrX 3415022 intron,intron CR44999 +,CG12535 - chrX 3418138 intron,intron CR44999 +,CG12535 - chrX 3421255 intron,intron CR44999 +,CG12535 - chrX_15_3415001 chrX_3415001 RAL-406 2733 chrX 3476334 3476373 chrX 3476437 3476446 11 91 2.5 2.0 2.2 3.4 112 chrX 3476334 intron CR44999 + chrX 3476390 intron CR44999 + chrX 3476446 intron CR44999 + chrX_11_3475001 chrX_3475001 RAL-406 2734 chrX 3493080 3493123 chrX 3502259 3502302 roo 9 9178 2.5 2.0 2.2 2.8 9222 chrX 3493080 intron,intron CR44999 +,Gas8 - chrX 3497691 intron,intron CR44999 +,Gas8 - chrX 3502302 intron,intron CR44999 +,Gas8 - chrX_9_3495001 chrX_3495001 RAL-406 2735 chrX 3513741 3513791 chrX 3513844 3513894 14 99 2.5 4.5 3.5 3.1 153 chrX 3513741 intron,intron CR44999 +,CG32791 - chrX 3513818 intron,intron CR44999 +,CG32791 - chrX 3513894 intron,intron CR44999 +,CG32791 - chrX_14_3510001 chrX_3510001 RAL-406 2736 chrX 3535403 3535434 chrX 3535498 3535545 11 102 0.0 5.0 2.5 3.1 142 chrX 3535403 intron CG32791 - chrX 3535474 intron CG32791 - chrX 3535545 intron CG32791 - chrX_11_3535001 chrX_3535001 RAL-406 2737 chrX 3553494 3553514 chrX 3553596 3553598 6 99 7.0 4.5 5.8 0.9 104 chrX 3553494 intron CG32791 - chrX 3553546 intron CG32791 - chrX 3553598 intron CG32791 - chrX_6_3550001 chrX_3550001 RAL-406 2738 chrX 3567276 3567285 chrX 3567374 3567390 5 104 0.0 2.5 1.2 2.3 114 chrX 3567276 intron,intron CG32791 -,ppk8 + chrX 3567333 intron,intron CG32791 -,ppk8 + chrX 3567390 intron,intron CG32791 -,ppk8 + chrX_5_3565001 chrX_3565001 RAL-406 2739 chrX 3595033 3595046 chrX 3595096 3595114 5 74 4.5 5.5 5.0 0.8 81 chrX 3595033 intron AstA-R1 + chrX 3595074 intron AstA-R1 + chrX 3595114 intron AstA-R1 + chrX_5_3595001 chrX_3595001 RAL-406 2740 chrX 3597090 3597126 chrX 3597198 3597234 9 107 3.5 1.5 2.5 2.6 144 chrX 3597090 intron AstA-R1 + chrX 3597162 intron AstA-R1 + chrX 3597234 intron AstA-R1 + chrX_9_3595001 chrX_3595001 RAL-406 2741 chrX 3597547 3597576 chrX 3619717 3619749 roo 5 22177 8.0 1.0 4.5 0.9 22202 chrX 3597547 intron AstA-R1 + chrX 3608648 intron AstA-R1 + chrX 3619749 intron AstA-R1 + chrX_5_3605001 chrX_3605001 RAL-406 2742 chrX 3630532 3630572 chrX 3630621 3630668 12 94 1.5 3.0 2.2 3.8 136 chrX 3630532 intron AstA-R1 + chrX 3630600 intron AstA-R1 + chrX 3630668 intron AstA-R1 + chrX_12_3630001 chrX_3630001 RAL-406 2743 chrX 3657400 3657447 chrX 3657492 3657533 23 91 4.0 4.0 4.0 4.6 133 chrX 3657400 intron AstA-R1 + chrX 3657466 intron AstA-R1 + chrX 3657533 intron AstA-R1 + chrX_23_3655001 chrX_3655001 RAL-406 2744 chrX 3662475 3662509 chrX 3662564 3662568 7 91 7.0 2.5 4.8 1.2 93 chrX 3662475 intron AstA-R1 + chrX 3662522 intron AstA-R1 + chrX 3662568 intron AstA-R1 + chrX_7_3660001 chrX_3660001 RAL-406 2745 chrX 3713112 3713137 chrX 3713209 3713266 13 124 4.0 4.5 4.2 2.5 154 chrX 3713112 intron Rala - chrX 3713189 intron Rala - chrX 3713266 intron Rala - chrX_13_3710001 chrX_3710001 RAL-406 2746 chrX 3726762 3726791 chrX 3730179 3730208 NOF 4 3414 1.5 5.0 3.2 1.0 3446 chrX 3726762 intron tlk + chrX 3728485 intron tlk + chrX 3730208 intron tlk + chrX_4_3725001 chrX_3725001 RAL-406 2747 chrX 3768269 3768287 chrX 3768355 3768393 4 101 4.0 0.0 2.0 1.3 124 chrX 3768269 intron tlk + chrX 3768331 intron tlk + chrX 3768393 intron tlk + chrX_4_3765001 chrX_3765001 RAL-406 2748 chrX 3862811 3862847 chrX 3862918 3862954 4 107 3.5 8.5 6.0 0.6 143 chrX 3862811 intergenic yin - chrX 3862882 intergenic yin - chrX 3862954 intergenic yin - chrX_4_3860001 chrX_3860001 RAL-406 2749 chrX 3866116 3866135 chrX 3866183 3866223 5 90 6.0 0.0 3.0 1.2 107 chrX 3866116 intron yin - chrX 3866170 intron yin - chrX 3866223 intron yin - chrX_5_3865001 chrX_3865001 RAL-406 2750 chrX 3881256 3881299 chrX 3881415 3881458 14 158 3.0 2.0 2.5 4.0 202 chrX 3881256 intron VhaAC39-1 + chrX 3881357 intron VhaAC39-1 + chrX 3881458 exon VhaAC39-1 + chrX_14_3880001 chrX_3880001 RAL-406 2751 chrX 3986877 3986894 chrX 3994499 3994509 412 8 7640 4.0 6.5 5.2 1.3 7632 chrX 3986877 intergenic not near genes chrX 3990693 intergenic not near genes chrX 3994509 intergenic not near genes chrX_8_3990001 chrX_3990001 RAL-406 2752 chrX 4157876 4157922 chrX 4164949 4164986 297 6 7071 4.0 1.0 2.5 1.7 7110 chrX 4157876 intron Fas2 - chrX 4161431 intron Fas2 - chrX 4164986 intron Fas2 - chrX_6_4160001 chrX_4160001 RAL-406 2753 chrX 4206209 4206242 chrX 4206343 4206376 9 134 0.5 4.5 2.5 2.6 167 chrX 4206209 intergenic Fas2 - chrX 4206292 intergenic Fas2 - chrX 4206376 intergenic Fas2 - chrX_9_4205001 chrX_4205001 RAL-406 2754 chrX 4216321 4216337 chrX 4216420 4216436 5 99 4.0 4.5 4.2 1.0 115 chrX 4216321 intergenic not near genes chrX 4216378 intergenic CG15571 - chrX 4216436 intergenic CG15571 - chrX_5_4215001 chrX_4215001 RAL-406 2755 chrX 4396963 4397006 chrX 4397068 4397101 12 99 2.5 1.5 2.0 4.0 138 chrX 4396963 intron CR32773 - chrX 4397032 intron CR32773 - chrX 4397101 intron CR32773 - chrX_12_4395001 chrX_4395001 RAL-406 2756 chrX 4568254 4568269 chrX 4568356 4568371 5 101 2.0 6.0 4.0 1.0 117 chrX 4568254 intron CR32773 - chrX 4568312 intron CR32773 - chrX 4568371 intron CR32773 - chrX_5_4565001 chrX_4565001 RAL-406 2757 chrX 4574883 4574897 chrX 4574994 4575003 6 110 4.0 1.5 2.8 1.6 120 chrX 4574883 intron CR32773 - chrX 4574943 intron CR32773 - chrX 4575003 intron CR32773 - chrX_6_4570001 chrX_4570001 RAL-406 2758 chrX 4575595 4575641 chrX 4575704 4575750 17 108 9.0 5.5 7.2 2.1 155 chrX 4575595 intron CR32773 - chrX 4575672 intron CR32773 - chrX 4575750 intron CR32773 - chrX_17_4575001 chrX_4575001 RAL-406 2759 chrX 4660798 4660831 chrX 4660917 4660945 15 118 6.5 0.0 3.2 3.6 147 chrX 4660798 intron CG3009 - chrX 4660872 intron CG3009 - chrX 4660945 intron CG3009 - chrX_15_4660001 chrX_4660001 RAL-406 2760 chrX 4700377 4700424 chrX 4700735 4700785 jockey 13 362 3.5 5.5 4.5 2.4 408 chrX 4700377 3` UTR ctp + chrX 4700581 3` UTR ctp + chrX 4700785 3` UTR ctp + chrX_13_4700001 chrX_4700001 RAL-406 2761 chrX 4744137 4744169 chrX 4744255 4744287 7 117 2.0 0.0 1.0 3.5 150 chrX 4744137 intergenic not near genes chrX 4744212 intergenic not near genes chrX 4744287 intergenic not near genes chrX_7_4740001 chrX_4740001 RAL-406 2762 chrX 4763255 4763279 chrX 4763763 4763787 Stalker4 6 508 4.5 14.0 9.2 0.6 532 chrX 4763255 intergenic not near genes chrX 4763521 intergenic not near genes chrX 4763787 intergenic not near genes chrX_6_4760001 chrX_4760001 RAL-406 2763 chrX 4792365 4792399 chrX 4792818 4792827 jockey 7 445 3.0 3.0 3.0 1.8 462 chrX 4792365 intergenic not near genes chrX 4792596 intergenic not near genes chrX 4792827 intergenic not near genes chrX_7_4790001 chrX_4790001 RAL-406 2764 chrX 4815024 4815033 chrX 4815149 4815158 5 125 1.5 12.0 6.8 0.6 134 chrX 4815024 intergenic not near genes chrX 4815091 intergenic not near genes chrX 4815158 intergenic not near genes chrX_5_4815001 chrX_4815001 RAL-406 2765 chrX 4827965 4827999 chrX 4835342 4835390 Stalker4 15 7376 4.0 3.0 3.5 3.3 7425 chrX 4827965 intergenic not near genes chrX 4831678 intergenic not near genes chrX 4835390 intergenic not near genes chrX_15_4830001 chrX_4830001 RAL-406 2766 chrX 4870493 4870503 chrX 4870716 4870727 6 224 5.5 3.0 4.2 1.2 234 chrX 4870493 intron CG42594 + chrX 4870610 intron CG42594 + chrX 4870727 intron CG42594 + chrX_6_4870001 chrX_4870001 RAL-406 2767 chrX 4870504 4870512 chrX 4870715 4870716 6 212 5.5 2.5 4.0 1.2 212 chrX 4870504 intron CG42594 + chrX 4870610 intron CG42594 + chrX 4870716 intron CG42594 + chrX_6_4870001 chrX_4870001 RAL-406 2768 chrX 4870531 4870541 chrX 4870711 4870765 4 212 2.0 2.5 2.2 1.2 234 chrX 4870531 intron CG42594 + chrX 4870648 intron CG42594 + chrX 4870765 intron CG42594 + chrX_4_4870001 chrX_4870001 RAL-406 2769 chrX 4885757 4885777 chrX 4885870 4885881 4 110 4.0 3.5 3.8 0.8 124 chrX 4885757 intron CG42594 + chrX 4885819 intron CG42594 + chrX 4885881 intron CG42594 + chrX_4_4885001 chrX_4885001 RAL-406 2770 chrX 4885780 4885808 chrX 4885869 4885889 7 79 2.0 3.5 2.8 1.8 109 chrX 4885780 intron CG42594 + chrX 4885834 intron CG42594 + chrX 4885889 intron CG42594 + chrX_7_4885001 chrX_4885001 RAL-406 2771 chrX 4990021 4990067 chrX 4997255 4997301 roo 23 7234 6.0 4.0 5.0 3.8 7280 chrX 4990021 intron CR44833 - chrX 4993661 intron CR44833 - chrX 4997301 intron CR44833 - chrX_23_4990001 chrX_4990001 RAL-406 2772 chrX 5096266 5096298 chrX 5103851 5103883 springer 15 7584 1.0 7.5 4.2 2.9 7617 chrX 5096266 intron,intron CG15465 +,rg + chrX 5100074 intron,intron CG15465 +,rg + chrX 5103883 intron,intron CG15465 +,rg + chrX_15_5100001 chrX_5100001 RAL-406 2773 chrX 5125881 5125926 chrX 5125973 5126001 13 93 1.5 6.0 3.8 2.7 120 chrX 5125881 intron,intron CG15465 +,rg + chrX 5125941 intron,intron CG15465 +,rg + chrX 5126001 intron,intron CG15465 +,rg + chrX_13_5125001 chrX_5125001 RAL-406 2774 chrX 5204442 5204481 chrX 5204660 5204700 14 220 3.5 6.5 5.0 2.3 258 chrX 5204442 intron,intron CG15465 +,rg + chrX 5204571 intron,intron CG15465 +,rg + chrX 5204700 intron,intron CG15465 +,rg + chrX_14_5200001 chrX_5200001 RAL-406 2775 chrX 5264047 5264074 chrX 5264143 5264184 7 106 2.5 4.5 3.5 1.6 137 chrX 5264047 intergenic not near genes chrX 5264116 intergenic not near genes chrX 5264184 intergenic not near genes chrX_7_5260001 chrX_5260001 RAL-406 2776 chrX 5323058 5323160 chrX 5323333 5323424 10 284 0.0 0.0 0.0 10.0 366 chrX 5323058 intergenic Rnp4F - chrX 5323241 intergenic not near genes chrX 5323424 intergenic Mcm3 + chrX_10_5320001 chrX_5320001 RAL-406 2777 chrX 5362833 5362836 chrX 5362965 5362967 6 132 2.0 6.5 4.2 1.2 134 chrX 5362833 intron SK + chrX 5362900 intron SK + chrX 5362967 intron SK + chrX_6_5360001 chrX_5360001 RAL-406 2778 chrX 5501470 5501502 chrX 5501580 5501606 11 108 6.0 5.0 5.5 1.7 136 chrX 5501470 intergenic CG4151 +,CG32762 - chrX 5501538 5` UTR CG4151 + chrX 5501606 5` UTR CG4151 + chrX_11_5500001 chrX_5500001 RAL-406 2779 chrX 5524823 5524868 chrX 5528702 5528711 412 4 3870 4.5 0.0 2.2 1.2 3888 chrX 5524823 intergenic snoRNA:Psi28S-3342 - chrX 5526767 intergenic not near genes chrX 5528711 intergenic Vsx2 - chrX_4_5525001 chrX_5525001 RAL-406 2780 chrX 5727404 5727413 chrX 5732162 5732172 Doc 4 4758 4.5 4.5 4.5 0.7 4768 chrX 5727404 intron CG32758 - chrX 5729788 intron CG32758 - chrX 5732172 intron CG32758 - chrX_4_5725001 chrX_5725001 RAL-406 2781 chrX 5798859 5798890 chrX 5799024 5799038 7 174 1.0 3.0 2.0 2.3 179 chrX 5798859 intergenic not near genes chrX 5798948 intergenic not near genes chrX 5799038 intergenic not near genes chrX_7_5795001 chrX_5795001 RAL-406 2782 chrX 5883803 5883817 chrX 5884063 5884078 pogo 4 261 6.5 9.0 7.8 0.5 275 chrX 5883803 intron CR45668 - chrX 5883940 intron CR45668 - chrX 5884078 intron CR45668 - chrX_4_5880001 chrX_5880001 RAL-406 2783 chrX 5883821 5883840 chrX 5884050 5884101 pogo 7 252 2.5 7.5 5.0 1.2 280 chrX 5883821 intron CR45668 - chrX 5883961 intron CR45668 - chrX 5884101 intron CR45668 - chrX_7_5880001 chrX_5880001 RAL-406 2784 chrX 5884142 5884179 chrX 5884403 5884440 pogo 9 259 7.0 1.5 4.2 1.7 298 chrX 5884142 intron CR45668 - chrX 5884291 intron CR45668 - chrX 5884440 intron CR45668 - chrX_9_5880001 chrX_5880001 RAL-406 2785 chrX 5995367 5995396 chrX 5995452 5995486 15 97 1.0 9.0 5.0 2.5 119 chrX 5995367 intergenic not near genes chrX 5995426 intergenic not near genes chrX 5995486 intergenic not near genes chrX_15_5995001 chrX_5995001 RAL-406 2786 chrX 6056404 6056459 chrX 6056501 6056548 12 96 3.5 1.5 2.5 3.4 144 chrX 6056404 intron CG5921 + chrX 6056476 intron CG5921 + chrX 6056548 intron CG5921 + chrX_12_6055001 chrX_6055001 RAL-406 2787 chrX 6080814 6080825 chrX 6080918 6080928 5 104 10.0 3.0 6.5 0.7 114 chrX 6080814 intron CG4660 - chrX 6080871 intron CG4660 - chrX 6080928 intron CG4660 - chrX_5_6080001 chrX_6080001 RAL-406 2788 chrX 6171566 6171573 chrX 6179019 6179026 Quasimodo 6 7453 10.0 6.0 8.0 0.7 7460 chrX 6171566 intron Ca-alpha1T - chrX 6175296 intron Ca-alpha1T - chrX 6179026 intron Ca-alpha1T - chrX_6_6175001 chrX_6175001 RAL-406 2789 chrX 6171583 6171609 chrX 6179016 6179062 Quasimodo 12 7448 6.5 6.0 6.2 1.7 7479 chrX 6171583 intron Ca-alpha1T - chrX 6175322 intron Ca-alpha1T - chrX 6179062 intron Ca-alpha1T - chrX_12_6175001 chrX_6175001 RAL-406 2790 chrX 6335214 6335233 chrX 6337744 6337763 Tirant 4 2530 1.0 8.5 4.8 0.7 2549 chrX 6335214 intergenic not near genes chrX 6336488 intergenic not near genes chrX 6337763 5` UTR CG3842 + chrX_4_6335001 chrX_6335001 RAL-406 2791 chrX 6335235 6335239 chrX 6337735 6337769 Tirant 4 2517 1.0 6.5 3.8 0.8 2534 chrX 6335235 intergenic not near genes chrX 6336502 intergenic not near genes chrX 6337769 5` UTR CG3842 + chrX_4_6335001 chrX_6335001 RAL-406 2792 chrX 6392875 6392904 chrX 6397637 6397672 Doc 8 4775 1.5 7.0 4.2 1.5 4797 chrX 6392875 intergenic not near genes chrX 6395274 intergenic not near genes chrX 6397672 intergenic not near genes chrX_8_6395001 chrX_6395001 RAL-406 2793 chrX 6412952 6412971 chrX 6413053 6413061 4 98 6.0 0.0 3.0 1.0 109 chrX 6412952 intergenic not near genes chrX 6413006 intergenic not near genes chrX 6413061 intergenic not near genes chrX_4_6410001 chrX_6410001 RAL-406 2794 chrX 6425003 6425011 chrX 6425540 6425583 9 542 29.5 23.5 26.5 0.3 580 chrX 6425003 intron CG42340 - chrX 6425293 intron CG42340 - chrX 6425583 intron CG42340 - chrX_9_6425001 chrX_6425001 RAL-406 2795 chrX 6445323 6445333 chrX 6451091 6451107 297 4 5774 3.5 7.0 5.2 0.6 5784 chrX 6445323 intron CG42340 - chrX 6448215 intron CG42340 - chrX 6451107 intron CG42340 - chrX_4_6445001 chrX_6445001 RAL-406 2796 chrX 6445334 6445336 chrX 6451069 6451114 297 4 5756 3.0 4.5 3.8 0.8 5780 chrX 6445334 intron CG42340 - chrX 6448224 intron CG42340 - chrX 6451114 intron CG42340 - chrX_4_6445001 chrX_6445001 RAL-406 2797 chrX 6454016 6454067 chrX 6454388 6454401 12 363 2.5 0.0 1.2 5.5 385 chrX 6454016 intron CG42340 - chrX 6454208 intron CG42340 - chrX 6454401 intron CG42340 - chrX_12_6450001 chrX_6450001 RAL-406 2798 chrX 6472676 6472715 chrX 6472943 6472980 15 272 2.5 1.5 2.0 5.0 304 chrX 6472676 intron CG42340 - chrX 6472828 intron CG42340 - chrX 6472980 intron CG42340 - chrX_15_6470001 chrX_6470001 RAL-406 2799 chrX 6581924 6581936 chrX 6582028 6582045 4 108 6.5 4.5 5.5 0.6 121 chrX 6581924 intron CG34417 + chrX 6581984 intron CG34417 + chrX 6582045 intron CG34417 + chrX_4_6580001 chrX_6580001 RAL-406 2800 chrX 6591836 6591870 chrX 6591941 6591975 7 105 5.0 0.0 2.5 2.0 139 chrX 6591836 intron Pat1 + chrX 6591906 intron Pat1 + chrX 6591975 intron Pat1 + chrX_7_6590001 chrX_6590001 RAL-406 2801 chrX 6629765 6629795 chrX 6629872 6629902 11 106 2.0 2.0 2.0 3.7 137 chrX 6629765 intron pigs + chrX 6629834 intron pigs + chrX 6629902 intron pigs + chrX_11_6625001 chrX_6625001 RAL-406 2802 chrX 6737500 6737546 chrX 6737601 6737635 11 91 4.5 2.5 3.5 2.4 135 chrX 6737500 intron CG3168 - chrX 6737568 intron CG3168 - chrX 6737635 intron CG3168 - chrX_11_6735001 chrX_6735001 RAL-406 2803 chrX 6896198 6896228 chrX 6896299 6896304 5 96 1.0 2.5 1.8 1.8 106 chrX 6896198 intergenic not near genes chrX 6896251 intergenic not near genes chrX 6896304 intergenic not near genes chrX_5_6895001 chrX_6895001 RAL-406 2804 chrX 6897588 6897710 chrX 6897675 6897840 12 125 1.0 1.5 1.2 5.5 252 chrX 6897588 intergenic not near genes chrX 6897714 intergenic not near genes chrX 6897840 intergenic not near genes chrX_12_6895001 chrX_6895001 RAL-406 2805 chrX 6989481 6989514 chrX 6989588 6989621 5 107 8.5 4.0 6.2 0.7 140 chrX 6989481 intron ogre - chrX 6989551 intron ogre - chrX 6989621 intron ogre - chrX_5_6985001 chrX_6985001 RAL-406 2806 chrX 7008048 7008066 chrX 7008175 7008189 4 127 7.5 2.5 5.0 0.7 141 chrX 7008048 intron Inx7 - chrX 7008118 intron Inx7 - chrX 7008189 intron Inx7 - chrX_4_7005001 chrX_7005001 RAL-406 2807 chrX 7023580 7023633 chrX 7030989 7031023 Tabor 11 7399 8.5 4.5 6.5 1.5 7443 chrX 7023580 intron CG12541 - chrX 7027302 intron CG12541 - chrX 7031023 intron CG12541 - chrX_11_7025001 chrX_7025001 RAL-406 2808 chrX 7125231 7125276 chrX 7134405 7134440 roo 14 9175 1.0 3.5 2.2 4.4 9209 chrX 7125231 intergenic not near genes chrX 7129836 intergenic not near genes chrX 7134440 intergenic not near genes chrX_14_7125001 chrX_7125001 RAL-406 2809 chrX 7386062 7386086 chrX 7386147 7386182 5 93 0.5 1.5 1.0 2.5 120 chrX 7386062 intron,intron CR44357 -,CG1677 - chrX 7386122 intron,intron CR44357 -,CG1677 - chrX 7386182 intron,intron CR44357 -,CG1677 - chrX_5_7385001 chrX_7385001 RAL-406 2810 chrX 7680095 7680120 chrX 7680197 7680205 5 96 2.5 6.5 4.5 0.9 110 chrX 7680095 3` UTR CR45666 - chrX 7680150 3` UTR CR45666 - chrX 7680205 3` UTR CR45666 - chrX_5_7680001 chrX_7680001 RAL-406 2811 chrX 7680122 7680132 chrX 7680194 7680195 4 84 1.5 5.5 3.5 0.9 73 chrX 7680122 3` UTR CR45666 - chrX 7680158 3` UTR CR45666 - chrX 7680195 3` UTR CR45666 - chrX_4_7680001 chrX_7680001 RAL-406 2812 chrX 7679854 7679870 chrX 7680452 7680499 11 611 11.0 29.0 20.0 0.5 645 chrX 7679854 intergenic CR45666 -,CR45667 - chrX 7680176 3` UTR CR45666 - chrX 7680499 3` UTR CR45666 - chrX_11_7680001 chrX_7680001 RAL-406 2813 chrX 7702895 7702931 chrX 7703342 7703350 jockey 11 449 6.0 8.5 7.2 1.3 455 chrX 7702895 intron CHES-1-like - chrX 7703122 intron CHES-1-like - chrX 7703350 intron CHES-1-like - chrX_11_7700001 chrX_7700001 RAL-406 2814 chrX 7832416 7832462 chrX 7832523 7832571 17 107 4.5 2.0 3.2 4.0 155 chrX 7832416 intron CG1402 + chrX 7832494 intron CG1402 + chrX 7832571 intron CG1402 + chrX_17_7830001 chrX_7830001 RAL-406 2815 chrX 7881826 7881880 chrX 7881930 7881982 16 102 3.0 5.5 4.2 3.1 156 chrX 7881826 intergenic Ir7f -,Ir7e - chrX 7881904 intergenic Ir7f -,Ir7e - chrX 7881982 3` UTR Ir7f - chrX_16_7880001 chrX_7880001 RAL-406 2816 chrX 7968519 7968525 chrX 7968668 7968674 4 149 0.0 11.5 5.8 0.6 155 chrX 7968519 intron sn + chrX 7968596 intron sn + chrX 7968674 intron sn + chrX_4_7965001 chrX_7965001 RAL-406 2817 chrX 8031411 8031449 chrX 8035735 8035778 Juan 6 4327 4.5 3.5 4.0 1.2 4367 chrX 8031411 intergenic not near genes chrX 8033594 intergenic not near genes chrX 8035778 3` UTR CG2233 - chrX_6_8030001 chrX_8030001 RAL-406 2818 chrX 8066557 8066603 chrX 8066659 8066712 9 108 0.5 1.0 0.8 5.0 155 chrX 8066557 intron mys + chrX 8066634 intron mys + chrX 8066712 intron mys + chrX_9_8065001 chrX_8065001 RAL-406 2819 chrX 8079897 8079903 chrX 8080027 8080033 5 129 2.0 5.0 3.5 1.1 136 chrX 8079897 exon CG2254 - chrX 8079965 intron CG2254 - chrX 8080033 intron CG2254 - chrX_5_8075001 chrX_8075001 RAL-406 2820 chrX 8079908 8079940 chrX 8080026 8080065 13 128 1.0 4.5 2.8 3.4 157 chrX 8079908 exon CG2254 - chrX 8079986 intron CG2254 - chrX 8080065 intron CG2254 - chrX_13_8075001 chrX_8075001 RAL-406 2821 chrX 8085553 8085601 chrX 8085659 8085707 12 106 4.5 5.5 5.0 2.0 154 chrX 8085553 intron,5` UTR CG2256 -,CR45535 + chrX 8085630 intron,5` UTR CG2256 -,CR45535 + chrX 8085707 intron,5` UTR CG2256 -,CR45535 + chrX_12_8085001 chrX_8085001 RAL-406 2822 chrX 8500911 8500959 chrX 8501095 8501125 16 182 4.5 0.0 2.2 5.0 214 chrX 8500911 intron CG33181 + chrX 8501018 intron CG33181 + chrX 8501125 intron CG33181 + chrX_16_8500001 chrX_8500001 RAL-406 2823 chrX 8509107 8509149 chrX 8509204 8509204 5 89 2.5 5.5 4.0 1.0 97 chrX 8509107 intron CG33181 + chrX 8509156 intron CG33181 + chrX 8509204 intron CG33181 + chrX_5_8505001 chrX_8505001 RAL-406 2824 chrX 8727392 8727431 chrX 8727489 8727516 5 95 3.5 9.5 6.5 0.7 124 chrX 8727392 intergenic not near genes chrX 8727454 intergenic not near genes chrX 8727516 intergenic not near genes chrX_5_8725001 chrX_8725001 RAL-406 2825 chrX 8860775 8860783 chrX 8860879 8860879 7 103 0.0 9.5 4.8 1.2 104 chrX 8860775 intron CG12075 + chrX 8860827 intron CG12075 + chrX 8860879 intron CG12075 + chrX_7_8860001 chrX_8860001 RAL-406 2826 chrX 8860784 8860796 chrX 8860868 8860900 10 101 0.0 6.5 3.2 2.4 116 chrX 8860784 intron CG12075 + chrX 8860842 intron CG12075 + chrX 8860900 intron CG12075 + chrX_10_8860001 chrX_8860001 RAL-406 2827 chrX 8885646 8885702 chrX 8885766 8885815 15 110 3.5 4.0 3.8 3.1 169 chrX 8885646 intron Moe - chrX 8885730 intron Moe - chrX 8885815 intron Moe - chrX_15_8885001 chrX_8885001 RAL-406 2828 chrX 8922317 8922352 chrX 8922771 8922796 jockey 4 452 2.0 1.5 1.8 1.4 479 chrX 8922317 intron rdgA + chrX 8922556 intron rdgA + chrX 8922796 intron rdgA + chrX_4_8920001 chrX_8920001 RAL-406 2829 chrX 8948739 8948785 chrX 8956269 8956315 roo 11 7523 3.0 4.5 3.8 2.3 7576 chrX 8948739 intron rdgA + chrX 8952527 intron rdgA + chrX 8956315 intron rdgA + chrX_11_8950001 chrX_8950001 RAL-406 2830 chrX 8968842 8968860 chrX 8968941 8968952 4 92 13.5 5.0 9.2 0.4 110 chrX 8968842 intron rdgA + chrX 8968897 intron rdgA + chrX 8968952 intron rdgA + chrX_4_8965001 chrX_8965001 RAL-406 2831 chrX 8990741 8990792 chrX 8990863 8990909 11 114 5.0 3.0 4.0 2.2 168 chrX 8990741 intron,intron rdgA +,CR43836 - chrX 8990825 intron,intron rdgA +,CR43836 - chrX 8990909 intron,intron rdgA +,CR43836 - chrX_11_8990001 chrX_8990001 RAL-406 2832 chrX 9218059 9218086 chrX 9218170 9218195 10 109 11.5 0.0 5.8 1.5 136 chrX 9218059 3` UTR t - chrX 9218127 3` UTR t - chrX 9218195 3` UTR t - chrX_10_9215001 chrX_9215001 RAL-406 2833 chrX 9337920 9337971 chrX 9338032 9338076 6 110 2.5 1.0 1.8 2.1 156 chrX 9337920 intron CG34449 - chrX 9337998 intron CG34449 - chrX 9338076 exon CG34449 - chrX_6_9335001 chrX_9335001 RAL-406 2834 chrX 9465744 9465799 chrX 9466109 9466164 15 360 3.5 5.0 4.2 2.9 420 chrX 9465744 intron mgl - chrX 9465954 intron mgl - chrX 9466164 intron mgl - chrX_15_9465001 chrX_9465001 RAL-406 2835 chrX 9508119 9508158 chrX 9509657 9509696 jockey 14 1536 4.5 4.0 4.2 2.7 1577 chrX 9508119 intron CG32700 - chrX 9508908 intron CG32700 - chrX 9509696 intron CG32700 - chrX_14_9505001 chrX_9505001 RAL-406 2836 chrX 9575801 9575822 chrX 9576114 9576166 mdg3 11 335 1.5 3.0 2.2 3.4 365 chrX 9575801 intron,exon CG32699 -,CG42395 - chrX 9575984 intron,intron CG32699 -,CG42395 - chrX 9576166 intron,5` UTR CG32699 -,CG42395 - chrX_11_9575001 chrX_9575001 RAL-406 2837 chrX 9576440 9576449 chrX 9576533 9576557 4 106 2.5 2.5 2.5 1.1 117 chrX 9576440 intron CG32699 - chrX 9576498 intron CG32699 - chrX 9576557 intron CG32699 - chrX_4_9575001 chrX_9575001 RAL-406 2838 chrX 9576451 9576462 chrX 9576532 9576573 6 100 2.0 2.5 2.2 1.9 122 chrX 9576451 intron CG32699 - chrX 9576512 intron CG32699 - chrX 9576573 intron CG32699 - chrX_6_9575001 chrX_9575001 RAL-406 2839 chrX 9758045 9758080 chrX 9758143 9758181 11 104 3.0 0.0 1.5 4.4 136 chrX 9758045 intergenic not near genes chrX 9758113 intergenic not near genes chrX 9758181 intergenic not near genes chrX_11_9755001 chrX_9755001 RAL-406 2840 chrX 10138195 10138247 chrX 10145719 10145756 412 16 7523 5.0 6.0 5.5 2.5 7561 chrX 10138195 intron,intron RhoU +,CR44894 - chrX 10141976 intron,intron RhoU +,CR44894 - chrX 10145756 intron,intron RhoU +,CR44894 - chrX_16_10140001 chrX_10140001 RAL-406 2841 chrX 10167640 10167686 chrX 10167771 10167817 7 128 4.0 2.0 3.0 1.8 177 chrX 10167640 intron,intron CR44894 -,CG43902 + chrX 10167728 intron,intron CR44894 -,CG43902 + chrX 10167817 intron,intron CR44894 -,CG43902 + chrX_7_10165001 chrX_10165001 RAL-406 2842 chrX 10216837 10216843 chrX 10216925 10216943 6 95 6.5 4.5 5.5 0.9 106 chrX 10216837 3` UTR l(1)G0230 + chrX 10216890 3` UTR l(1)G0230 + chrX 10216943 3` UTR l(1)G0230 + chrX_6_10215001 chrX_10215001 RAL-406 2843 chrX 10267299 10267322 chrX 10276469 10276488 roo 5 9168 1.5 4.5 3.0 1.2 9189 chrX 10267299 3` UTR alpha-Man-I - chrX 10271894 intron alpha-Man-I - chrX 10276488 3` UTR alpha-Man-I - chrX_5_10270001 chrX_10270001 RAL-406 2844 chrX 10306057 10306069 chrX 10306153 10306170 6 100 11.0 0.0 5.5 0.9 113 chrX 10306057 intron alpha-Man-I - chrX 10306114 intron alpha-Man-I - chrX 10306170 intron alpha-Man-I - chrX_6_10305001 chrX_10305001 RAL-406 2845 chrX 10317535 10317574 chrX 10317633 10317671 18 96 4.0 5.0 4.5 3.3 136 chrX 10317535 intron alpha-Man-I - chrX 10317603 intron alpha-Man-I - chrX 10317671 intron alpha-Man-I - chrX_18_10315001 chrX_10315001 RAL-406 2846 chrX 10348783 10348824 chrX 10356368 10356368 springer 16 7578 4.5 5.0 4.8 2.8 7585 chrX 10348783 intergenic snoRNA:U3:9B + chrX 10352576 intergenic not near genes chrX 10356368 intergenic l(1)G0289 - chrX_16_10350001 chrX_10350001 RAL-406 2847 chrX 10587365 10587408 chrX 10587716 10587760 12 348 4.0 4.5 4.2 2.3 395 chrX 10587365 intergenic not near genes chrX 10587562 intergenic not near genes chrX 10587760 intergenic not near genes chrX_12_10585001 chrX_10585001 RAL-406 2848 chrX 10686030 10686079 chrX 10691187 10691236 roo 14 5154 4.5 7.0 5.8 2.1 5206 chrX 10686030 intron X11Lbeta + chrX 10688633 intron X11Lbeta + chrX 10691236 intron X11Lbeta + chrX_14_10685001 chrX_10685001 RAL-406 2849 chrX 10694155 10694185 chrX 10694230 10694264 5 82 4.5 3.0 3.8 1.0 109 chrX 10694155 intron X11Lbeta + chrX 10694210 intron X11Lbeta + chrX 10694264 intron X11Lbeta + chrX_5_10690001 chrX_10690001 RAL-406 2850 chrX 10719134 10719145 chrX 10719200 10719244 4 92 0.0 0.5 0.2 3.3 110 chrX 10719134 intron CG32676 - chrX 10719189 intron CG32676 - chrX 10719244 intron CG32676 - chrX_4_10715001 chrX_10715001 RAL-406 2851 chrX 10772678 10772693 chrX 10772761 10772786 Tirant 5 92 4.5 3.0 3.8 1.0 108 chrX 10772678 intron CG15211 + chrX 10772732 intron CG15211 + chrX 10772786 intron CG15211 + chrX_5_10770001 chrX_10770001 RAL-406 2852 chrX 10803014 10803047 chrX 10803119 10803152 8 101 7.5 9.5 8.5 0.8 138 chrX 10803014 intron Imp - chrX 10803083 intron Imp - chrX 10803152 intron Imp - chrX_8_10800001 chrX_10800001 RAL-406 2853 chrX 10824108 10824125 chrX 10824261 10824279 10 152 8.0 2.5 5.2 1.6 171 chrX 10824108 intergenic CR45624 + chrX 10824194 intergenic CR45624 + chrX 10824279 5` UTR CR45624 + chrX_10_10820001 chrX_10820001 RAL-406 2854 chrX 10824128 10824133 chrX 10824260 10824287 5 150 7.5 2.5 5.0 0.8 159 chrX 10824128 intergenic CR45624 + chrX 10824208 intergenic CR45624 + chrX 10824287 5` UTR CR45624 + chrX_5_10820001 chrX_10820001 RAL-406 2855 chrX 10824137 10824156 chrX 10824259 10824270 10 137 4.5 2.5 3.5 2.2 133 chrX 10824137 intergenic CR45624 + chrX 10824204 intergenic CR45624 + chrX 10824270 5` UTR CR45624 + chrX_10_10820001 chrX_10820001 RAL-406 2856 chrX 11034268 11034323 chrX 11034618 11034668 9 348 3.5 4.5 4.0 1.8 400 chrX 11034268 intron CG42339 - chrX 11034468 intron CG42339 - chrX 11034668 intron CG42339 - chrX_9_11030001 chrX_11030001 RAL-406 2857 chrX 11069154 11069182 chrX 11069300 11069345 15 159 4.5 3.0 3.8 3.1 191 chrX 11069154 intergenic not near genes chrX 11069250 intergenic not near genes chrX 11069345 intergenic not near genes chrX_15_11065001 chrX_11065001 RAL-406 2858 chrX 11081662 11081709 chrX 11082610 11082656 16 944 2.5 5.5 4.0 3.2 994 chrX 11081662 intron sev - chrX 11082159 intron sev - chrX 11082656 intron sev - chrX_16_11080001 chrX_11080001 RAL-406 2859 chrX 11095980 11096024 chrX 11103102 11103146 HMS-Beagle 18 7119 3.5 5.0 4.2 3.5 7166 chrX 11095980 intergenic not near genes chrX 11099563 intergenic not near genes chrX 11103146 intron CG42249 + chrX_18_11095001 chrX_11095001 RAL-406 2860 chrX 11184227 11184258 chrX 11189326 11189357 flea 5 5096 3.5 3.5 3.5 1.1 5130 chrX 11184227 intergenic not near genes chrX 11186792 intergenic not near genes chrX 11189357 intergenic not near genes chrX_5_11185001 chrX_11185001 RAL-406 2861 chrX 11205275 11205323 chrX 11205371 11205419 12 93 2.5 6.0 4.2 2.3 144 chrX 11205275 intergenic not near genes chrX 11205347 intergenic not near genes chrX 11205419 intergenic not near genes chrX_12_11205001 chrX_11205001 RAL-406 2862 chrX 11214992 11215007 chrX 11215362 11215390 6 377 4.0 4.0 4.0 1.2 398 chrX 11214992 intergenic not near genes chrX 11215191 intergenic not near genes chrX 11215390 intergenic not near genes chrX_6_11215001 chrX_11215001 RAL-406 2863 chrX 11277248 11277283 chrX 11277336 11277343 18 91 2.5 7.5 5.0 3.0 95 chrX 11277248 intron CG44422 - chrX 11277296 intron CG44422 - chrX 11277343 intron CG44422 - chrX_18_11275001 chrX_11275001 RAL-406 2864 chrX 11312036 11312078 chrX 11319409 11319424 Stalker2 6 7361 3.5 2.0 2.8 1.6 7388 chrX 11312036 intergenic not near genes chrX 11315730 intergenic not near genes chrX 11319424 intergenic not near genes chrX_6_11315001 chrX_11315001 RAL-406 2865 chrX 11379749 11379791 chrX 11379914 11379934 13 161 2.5 6.5 4.5 2.4 185 chrX 11379749 intron dlg1 + chrX 11379842 intron dlg1 + chrX 11379934 intron dlg1 + chrX_13_11375001 chrX_11375001 RAL-406 2866 chrX 11535031 11535044 chrX 11541518 11541534 Burdock 7 6489 8.5 2.0 5.2 1.1 6503 chrX 11535031 intron Drak + chrX 11538282 intron Drak + chrX 11541534 intron Drak + chrX_7_11535001 chrX_11535001 RAL-406 2867 chrX 11558266 11558285 chrX 11558365 11558389 8 99 8.0 1.5 4.8 1.4 123 chrX 11558266 intron CG1572 - chrX 11558328 intron CG1572 - chrX 11558389 intron CG1572 - chrX_8_11555001 chrX_11555001 RAL-406 2868 chrX 11633395 11633446 chrX 11640469 11640520 297 21 7074 6.0 4.0 5.0 3.5 7125 chrX 11633395 intron Ptp10D + chrX 11636958 intron Ptp10D + chrX 11640520 intron Ptp10D + chrX_21_11635001 chrX_11635001 RAL-406 2869 chrX 11719851 11719892 chrX 11719951 11719992 15 97 3.0 5.0 4.0 3.0 141 chrX 11719851 3` UTR prtp + chrX 11719922 intergenic prtp +,Tango10 + chrX 11719992 intergenic prtp +,Tango10 + chrX_15_11715001 chrX_11715001 RAL-406 2870 chrX 11799001 11799027 chrX 11799107 11799133 11 106 5.5 2.5 4.0 2.2 132 chrX 11799001 intron CkIIbeta + chrX 11799067 intron CkIIbeta + chrX 11799133 intron CkIIbeta + chrX_11_11795001 chrX_11795001 RAL-406 2871 chrX 11799029 11799037 chrX 11799103 11799143 4 98 5.0 2.5 3.8 0.8 114 chrX 11799029 intron CkIIbeta + chrX 11799086 intron CkIIbeta + chrX 11799143 intron CkIIbeta + chrX_4_11795001 chrX_11795001 RAL-406 2872 chrX 11804654 11804676 chrX 11804778 11804786 7 122 4.5 4.5 4.5 1.3 132 chrX 11804654 intron Hsc70-3 - chrX 11804720 intron Hsc70-3 - chrX 11804786 intron Hsc70-3 - chrX_7_11800001 chrX_11800001 RAL-406 2873 chrX 11922350 11922375 chrX 11922506 11922531 15 154 7.0 5.0 6.0 2.1 181 chrX 11922350 exon Sclp - chrX 11922440 intron Sclp - chrX 11922531 intron Sclp - chrX_15_11920001 chrX_11920001 RAL-406 2874 chrX 11936550 11936583 chrX 11936668 11936697 7 117 0.0 4.5 2.2 2.2 147 chrX 11936550 intron cac - chrX 11936624 intron cac - chrX 11936697 exon cac - chrX_7_11935001 chrX_11935001 RAL-406 2875 chrX 11945066 11945085 chrX 11945189 11945207 9 123 5.0 6.5 5.8 1.3 141 chrX 11945066 intron cac - chrX 11945136 intron cac - chrX 11945207 intron cac - chrX_9_11945001 chrX_11945001 RAL-406 2876 chrX 12126132 12126167 chrX 12126497 12126545 8 370 4.0 1.5 2.8 2.1 413 chrX 12126132 intron Ten-a + chrX 12126338 intron Ten-a + chrX 12126545 intron Ten-a + chrX_8_12125001 chrX_12125001 RAL-406 2877 chrX 12191576 12191585 chrX 12191684 12191693 4 108 2.0 8.0 5.0 0.7 117 chrX 12191576 intron Ten-a + chrX 12191634 intron Ten-a + chrX 12191693 intron Ten-a + chrX_4_12190001 chrX_12190001 RAL-406 2878 chrX 12202754 12202793 chrX 12202857 12202896 6 103 3.5 4.5 4.0 1.2 142 chrX 12202754 intron Ten-a + chrX 12202825 intron Ten-a + chrX 12202896 intron Ten-a + chrX_6_12200001 chrX_12200001 RAL-406 2879 chrX 12246944 12246985 chrX 12247060 12247066 8 105 2.5 5.0 3.8 1.7 122 chrX 12246944 intron Ten-a + chrX 12247005 intron Ten-a + chrX 12247066 intron Ten-a + chrX_8_12245001 chrX_12245001 RAL-406 2880 chrX 12350764 12350797 chrX 12350857 12350862 6 90 3.0 0.0 1.5 2.4 98 chrX 12350764 intergenic not near genes chrX 12350813 intergenic not near genes chrX 12350862 intergenic not near genes chrX_6_12350001 chrX_12350001 RAL-406 2881 chrX 12356860 12356877 chrX 12356961 12357009 6 117 0.0 5.0 2.5 1.7 149 chrX 12356860 intergenic not near genes chrX 12356934 intergenic not near genes chrX 12357009 intergenic not near genes chrX_6_12355001 chrX_12355001 RAL-406 2882 chrX 12375479 12375513 chrX 12375597 12375622 5 116 1.0 1.5 1.2 2.3 143 chrX 12375479 intergenic Ir11a - chrX 12375550 intergenic Ir11a - chrX 12375622 exon Ir11a - chrX_5_12375001 chrX_12375001 RAL-406 2883 chrX 12421217 12421237 chrX 12421322 12421342 11 105 4.5 3.0 3.8 2.3 125 chrX 12421217 intergenic not near genes chrX 12421280 intergenic not near genes chrX 12421342 intergenic not near genes chrX_11_12420001 chrX_12420001 RAL-406 2884 chrX 12528860 12528869 chrX 12528956 12528965 4 96 7.0 4.0 5.5 0.6 105 chrX 12528860 intron CG43921 - chrX 12528912 intron CG43921 - chrX 12528965 intron CG43921 - chrX_4_12525001 chrX_12525001 RAL-406 2885 chrX 12533773 12533783 chrX 12533870 12533875 4 94 0.0 1.5 0.8 2.2 102 chrX 12533773 intron CG43921 - chrX 12533824 intron CG43921 - chrX 12533875 intron CG43921 - chrX_4_12530001 chrX_12530001 RAL-406 2886 chrX 12694180 12694197 chrX 12694264 12694285 4 94 8.0 4.0 6.0 0.6 105 chrX 12694180 intron Smr - chrX 12694232 intron Smr - chrX 12694285 intron Smr - chrX_4_12690001 chrX_12690001 RAL-406 2887 chrX 12930588 12930606 chrX 12937714 12937729 HMS-Beagle 6 7129 7.0 10.5 8.8 0.6 7141 chrX 12930588 intron fne + chrX 12934158 intron fne + chrX 12937729 intron fne + chrX_6_12930001 chrX_12930001 RAL-406 2888 chrX 8810799 8810799 chrX 12946234 12946234 4 4135435 20.5 34.5 27.5 0.1 4135435 chrX 8810799 intergenic not near genes chrX 10878516 exon Ork1 - chrX 12946234 3` UTR fne + chrX_4_10875001 chrX_10875001 RAL-406 2889 chrX 12977050 12977056 chrX 12977146 12977152 5 96 4.5 6.5 5.5 0.8 102 chrX 12977050 intergenic not near genes chrX 12977101 intergenic not near genes chrX 12977152 intergenic not near genes chrX_5_12975001 chrX_12975001 RAL-406 2890 chrX 12985962 12986003 chrX 12986074 12986102 10 112 2.0 6.0 4.0 2.0 140 chrX 12985962 intergenic not near genes chrX 12986032 intergenic not near genes chrX 12986102 intergenic not near genes chrX_10_12985001 chrX_12985001 RAL-406 2891 chrX 13061336 13061365 chrX 13061467 13061491 4 130 4.0 0.0 2.0 1.3 155 chrX 13061336 intron rad + chrX 13061414 intron rad + chrX 13061491 intron rad + chrX_4_13060001 chrX_13060001 RAL-406 2892 chrX 13146577 13146631 chrX 13146685 13146739 24 105 4.5 3.0 3.8 5.0 162 chrX 13146577 intron CG32645 + chrX 13146658 intron CG32645 + chrX 13146739 intron CG32645 + chrX_24_13145001 chrX_13145001 RAL-406 2893 chrX 13172349 13172370 chrX 13172439 13172466 8 91 5.5 4.0 4.8 1.4 117 chrX 13172349 exon CG34411 - chrX 13172408 intron CG34411 - chrX 13172466 intron CG34411 - chrX_8_13170001 chrX_13170001 RAL-406 2894 chrX 13329308 13329319 chrX 13329422 13329433 6 113 3.0 2.0 2.5 1.7 125 chrX 13329308 intergenic IP3K2 + chrX 13329370 intergenic IP3K2 +,Jafrac1 + chrX 13329433 intergenic IP3K2 +,Jafrac1 + chrX_6_13325001 chrX_13325001 RAL-406 2895 chrX 13342447 13342463 chrX 13342554 13342570 4 107 3.0 0.0 1.5 1.6 123 chrX 13342447 intergenic not near genes chrX 13342508 intergenic not near genes chrX 13342570 intergenic not near genes chrX_4_13340001 chrX_13340001 RAL-406 2896 chrX 13374831 13374862 chrX 13374931 13374943 4 95 2.0 7.0 4.5 0.7 112 chrX 13374831 intron CG1640 + chrX 13374887 intron CG1640 + chrX 13374943 intron CG1640 + chrX_4_13370001 chrX_13370001 RAL-406 2897 chrX 13401462 13401515 chrX 13401834 13401878 jockey 11 370 3.5 3.0 3.2 2.6 416 chrX 13401462 intergenic CG1673 +,CG12725 - chrX 13401670 intergenic CG12725 -,CG1673 + chrX 13401878 3` UTR CG12725 - chrX_11_13400001 chrX_13400001 RAL-406 2898 chrX 13429473 13429487 chrX 13430616 13430651 jockey 4 1161 0.0 11.5 5.8 0.6 1178 chrX 13429473 intergenic not near genes chrX 13430062 intergenic not near genes chrX 13430651 intergenic not near genes chrX_4_13430001 chrX_13430001 RAL-406 2899 chrX 13463626 13463674 chrX 13469222 13469256 mdg3 23 5593 3.5 3.5 3.5 5.1 5630 chrX 13463626 intron Neto + chrX 13466441 intron Neto + chrX 13469256 intron Neto + chrX_23_13465001 chrX_13465001 RAL-406 2900 chrX 13550467 13550483 chrX 13550569 13550585 4 99 3.0 0.5 1.8 1.4 118 chrX 13550467 intergenic not near genes chrX 13550526 intergenic not near genes chrX 13550585 intergenic not near genes chrX_4_13550001 chrX_13550001 RAL-406 2901 chrX 13777684 13777699 chrX 13777792 13777807 4 108 5.5 8.0 6.8 0.5 123 chrX 13777684 3` UTR rdgB + chrX 13777746 3` UTR rdgB + chrX 13777807 3` UTR rdgB + chrX_4_13775001 chrX_13775001 RAL-406 2902 chrX 13889702 13889750 chrX 13889895 13889919 15 188 2.5 6.5 4.5 2.7 217 chrX 13889702 intron mamo - chrX 13889810 intron mamo - chrX 13889919 intron mamo - chrX_15_13885001 chrX_13885001 RAL-406 2903 chrX 13934275 13934317 chrX 13934378 13934415 14 99 3.0 5.0 4.0 2.8 140 chrX 13934275 intron mamo - chrX 13934345 intron mamo - chrX 13934415 intron mamo - chrX_14_13930001 chrX_13930001 RAL-406 2904 chrX 13935504 13935524 chrX 13935602 13935627 4 102 4.5 10.0 7.2 0.5 123 chrX 13935504 intron mamo - chrX 13935566 intron mamo - chrX 13935627 intron mamo - chrX_4_13935001 chrX_13935001 RAL-406 2905 chrX 13937962 13938007 chrX 13941253 13941298 I-element 14 3290 6.0 2.0 4.0 2.8 3336 chrX 13937962 intron mamo - chrX 13939630 intron mamo - chrX 13941298 intron mamo - chrX_14_13935001 chrX_13935001 RAL-406 2906 chrX 13057299 13057304 chrX 13966949 13966949 4 909646 22.5 9.0 15.8 0.2 909650 chrX 13057299 intron rad + chrX 13512124 intron Neto + chrX 13966949 intron mamo - chrX_4_13510001 chrX_13510001 RAL-406 2907 chrX 13975880 13975907 chrX 13975972 13976004 13 94 0.0 7.0 3.5 2.9 124 chrX 13975880 intron mamo - chrX 13975942 intron mamo - chrX 13976004 intron mamo - chrX_13_13975001 chrX_13975001 RAL-406 2908 chrX 14105027 14105037 chrX 14114186 14114188 roo 4 9163 8.0 2.0 5.0 0.7 9161 chrX 14105027 intergenic not near genes chrX 14109608 intergenic not near genes chrX 14114188 5` UTR CR44657 + chrX_4_14105001 chrX_14105001 RAL-406 2909 chrX 14142874 14142904 chrX 14142965 14143001 11 96 7.0 2.5 4.8 1.9 127 chrX 14142874 intergenic not near genes chrX 14142938 intergenic not near genes chrX 14143001 intergenic not near genes chrX_11_14140001 chrX_14140001 RAL-406 2910 chrX 14157573 14157603 chrX 14163250 14163275 297 9 5675 12.5 5.5 9.0 0.9 5702 chrX 14157573 intergenic not near genes chrX 14160424 intergenic not near genes chrX 14163275 intergenic not near genes chrX_9_14160001 chrX_14160001 RAL-406 2911 chrX 14186010 14186058 chrX 14186530 14186568 18 518 5.5 5.5 5.5 2.8 558 chrX 14186010 intergenic CG32603 + chrX 14186289 intergenic CG32603 + chrX 14186568 intergenic not near genes chrX_18_14185001 chrX_14185001 RAL-406 2912 chrX 14296437 14296444 chrX 14296533 14296540 4 96 10.5 1.5 6.0 0.6 103 chrX 14296437 intergenic not near genes chrX 14296488 intergenic not near genes chrX 14296540 intergenic not near genes chrX_4_14295001 chrX_14295001 RAL-406 2913 chrX 14296449 14296487 chrX 14296532 14296583 14 90 4.0 1.5 2.8 3.7 134 chrX 14296449 intergenic not near genes chrX 14296516 intergenic not near genes chrX 14296583 intergenic not near genes chrX_14_14295001 chrX_14295001 RAL-406 2914 chrX 14297119 14297136 chrX 14297221 14297232 4 97 5.0 5.0 5.0 0.7 113 chrX 14297119 intergenic not near genes chrX 14297176 intergenic not near genes chrX 14297232 intergenic not near genes chrX_4_14295001 chrX_14295001 RAL-406 2915 chrX 14300528 14300573 chrX 14300625 14300670 6 96 3.5 5.5 4.5 1.1 142 chrX 14300528 intergenic not near genes chrX 14300599 intergenic not near genes chrX 14300670 intergenic not near genes chrX_6_14300001 chrX_14300001 RAL-406 2916 chrX 14366519 14366534 chrX 14366619 14366629 4 99 10.0 3.5 6.8 0.5 110 chrX 14366519 intron dpr8 + chrX 14366574 intron dpr8 + chrX 14366629 intron dpr8 + chrX_4_14365001 chrX_14365001 RAL-406 2917 chrX 14381397 14381412 chrX 14381571 14381586 5 174 4.5 0.0 2.2 1.6 189 chrX 14381397 intron,3` UTR dpr8 +,betaNACtes4 + chrX 14381492 intron dpr8 + chrX 14381586 intron dpr8 + chrX_5_14380001 chrX_14380001 RAL-406 2918 chrX 14395094 14395134 chrX 14395202 14395253 12 114 4.0 3.0 3.5 2.7 159 chrX 14395094 intron dpr8 + chrX 14395174 intron dpr8 + chrX 14395253 intron dpr8 + chrX_12_14395001 chrX_14395001 RAL-406 2919 chrX 14401536 14401573 chrX 14401665 14401701 10 127 4.0 1.5 2.8 2.6 165 chrX 14401536 intron dpr8 + chrX 14401618 intron dpr8 + chrX 14401701 intron dpr8 + chrX_10_14400001 chrX_14400001 RAL-406 2920 chrX 14404996 14405020 chrX 14405094 14405102 7 91 6.5 0.0 3.2 1.7 106 chrX 14404996 intron dpr8 + chrX 14405049 intron dpr8 + chrX 14405102 intron dpr8 + chrX_7_14405001 chrX_14405001 RAL-406 2921 chrX 14407247 14407271 chrX 14407349 14407373 12 101 1.5 4.0 2.8 3.2 126 chrX 14407247 intron dpr8 + chrX 14407310 intron dpr8 + chrX 14407373 intron dpr8 + chrX_12_14405001 chrX_14405001 RAL-406 2922 chrX 14411247 14411292 chrX 14411339 14411350 16 85 4.0 2.0 3.0 4.0 103 chrX 14411247 intron dpr8 + chrX 14411298 intron dpr8 + chrX 14411350 intron dpr8 + chrX_16_14410001 chrX_14410001 RAL-406 2923 chrX 14412891 14412902 chrX 14412982 14413023 4 108 2.0 2.5 2.2 1.2 132 chrX 14412891 intron dpr8 + chrX 14412957 intron dpr8 + chrX 14413023 intron dpr8 + chrX_4_14410001 chrX_14410001 RAL-406 2924 chrX 14416297 14416317 chrX 14421075 14421105 F-element 11 4787 6.0 6.0 6.0 1.6 4808 chrX 14416297 intron dpr8 + chrX 14418701 intron dpr8 + chrX 14421105 intron dpr8 + chrX_11_14415001 chrX_14415001 RAL-406 2925 chrX 14484958 14484986 chrX 14485067 14485095 7 109 0.0 6.0 3.0 1.8 137 chrX 14484958 intergenic not near genes chrX 14485026 intergenic not near genes chrX 14485095 intergenic not near genes chrX_7_14485001 chrX_14485001 RAL-406 2926 chrX 14487817 14487847 chrX 14487917 14487930 8 103 3.5 4.0 3.8 1.7 113 chrX 14487817 intergenic not near genes chrX 14487874 intergenic not near genes chrX 14487930 intergenic not near genes chrX_8_14485001 chrX_14485001 RAL-406 2927 chrX 14597718 14597750 chrX 14597815 14597817 5 91 4.0 4.0 4.0 1.0 99 chrX 14597718 intron CG9413 - chrX 14597768 intron CG9413 - chrX 14597817 intron CG9413 - chrX_5_14595001 chrX_14595001 RAL-406 2928 chrX 14628732 14628779 chrX 14628833 14628880 14 98 4.5 5.0 4.8 2.4 148 chrX 14628732 intron NetA - chrX 14628806 intron NetA - chrX 14628880 intron NetA - chrX_14_14625001 chrX_14625001 RAL-406 2929 chrX 14636458 14636479 chrX 14641913 14641940 I-element 6 5460 3.0 2.5 2.8 1.6 5482 chrX 14636458 intron NetA - chrX 14639199 intron NetA - chrX 14641940 intron NetA - chrX_6_14635001 chrX_14635001 RAL-406 2930 chrX 14678922 14678964 chrX 14679020 14679067 14 100 7.0 5.0 6.0 2.0 145 chrX 14678922 intergenic not near genes chrX 14678994 intergenic not near genes chrX 14679067 intergenic CG5321 + chrX_14_14675001 chrX_14675001 RAL-406 2931 chrX 14778016 14778054 chrX 14782833 14782871 Doc 16 4816 9.0 9.0 9.0 1.6 4855 chrX 14778016 intergenic CG5347 + chrX 14780444 intergenic not near genes chrX 14782871 intergenic Ag5r2 - chrX_16_14780001 chrX_14780001 RAL-406 2932 chrX 14806748 14806781 chrX 14806845 14806889 13 106 2.5 0.5 1.5 5.2 141 chrX 14806748 intron rut - chrX 14806818 intron rut - chrX 14806889 intron rut - chrX_13_14805001 chrX_14805001 RAL-406 2933 chrX 14813716 14813755 chrX 14813814 14813853 14 97 4.0 1.5 2.8 3.7 137 chrX 14813716 intron rut - chrX 14813784 intron rut - chrX 14813853 intron rut - chrX_14_14810001 chrX_14810001 RAL-406 2934 chrX 14900831 14900878 chrX 14901043 14901084 20 208 5.0 5.0 5.0 3.3 253 chrX 14900831 intron Flo2 + chrX 14900958 intron Flo2 + chrX 14901084 intron Flo2 + chrX_20_14900001 chrX_14900001 RAL-406 2935 chrX 14936837 14936891 chrX 14946115 14946189 roo 4 9288 0.0 0.5 0.2 3.3 9352 chrX 14936837 intron pdgy - chrX 14941513 intron pdgy - chrX 14946189 intron pdgy - chrX_4_14940001 chrX_14940001 RAL-406 2936 chrX 14960376 14960414 chrX 14960537 14960565 20 160 2.5 3.5 3.0 5.0 189 chrX 14960376 intron eag + chrX 14960470 intron eag + chrX 14960565 intron eag + chrX_20_14960001 chrX_14960001 RAL-406 2937 chrX 14981690 14981739 chrX 14981784 14981835 8 98 4.0 0.5 2.2 2.5 145 chrX 14981690 intron eag + chrX 14981762 intron eag + chrX 14981835 intron eag + chrX_8_14980001 chrX_14980001 RAL-406 2938 chrX 15059153 15059207 chrX 15059279 15059333 5 126 0.5 2.0 1.2 2.3 180 chrX 15059153 exon hiw - chrX 15059243 intron hiw - chrX 15059333 intron hiw - chrX_5_15055001 chrX_15055001 RAL-406 2939 chrX 15234346 15234401 chrX 15234449 15234468 18 100 5.5 3.5 4.5 3.3 122 chrX 15234346 intergenic not near genes chrX 15234407 intergenic not near genes chrX 15234468 intergenic not near genes chrX_18_15230001 chrX_15230001 RAL-406 2940 chrX 15248241 15248296 chrX 15248337 15248392 16 95 2.5 2.0 2.2 5.0 151 chrX 15248241 intergenic not near genes chrX 15248316 intergenic not near genes chrX 15248392 intergenic not near genes chrX_16_15245001 chrX_15245001 RAL-406 2941 chrX 15369812 15369860 chrX 15369915 15369958 13 102 2.5 5.5 4.0 2.6 146 chrX 15369812 intron acj6 - chrX 15369885 intron acj6 - chrX 15369958 intron acj6 - chrX_13_15365001 chrX_15365001 RAL-406 2942 chrX 15421899 15421948 chrX 15423430 15423479 pogo 8 1521 3.0 3.5 3.2 1.9 1580 chrX 15421899 intron Cngl - chrX 15422689 intron Cngl - chrX 15423479 intron Cngl - chrX_8_15420001 chrX_15420001 RAL-406 2943 chrX 15435687 15435702 chrX 15436140 15436150 rover 8 452 3.5 7.0 5.2 1.3 463 chrX 15435687 intron Cngl - chrX 15435918 intron Cngl - chrX 15436150 intron Cngl - chrX_8_15435001 chrX_15435001 RAL-406 2944 chrX 15535913 15535959 chrX 15536011 15536022 18 90 7.0 3.0 5.0 3.0 109 chrX 15535913 intron Ac13E - chrX 15535968 intron Ac13E - chrX 15536022 intron Ac13E - chrX_18_15535001 chrX_15535001 RAL-406 2945 chrX 15589442 15589457 chrX 15589639 15589656 4 198 6.5 10.0 8.2 0.4 214 chrX 15589442 intron CG9220 - chrX 15589549 intron CG9220 - chrX 15589656 exon CG9220 - chrX_4_15585001 chrX_15585001 RAL-406 2946 chrX 15959518 15959563 chrX 15959626 15959671 18 106 3.5 8.5 6.0 2.6 153 chrX 15959518 intron mmd - chrX 15959594 intron mmd - chrX 15959671 intron mmd - chrX_18_15955001 chrX_15955001 RAL-406 2947 chrX 16156686 16156726 chrX 16156807 16156852 15 123 1.5 2.5 2.0 5.0 166 chrX 16156686 intergenic not near genes chrX 16156769 intergenic not near genes chrX 16156852 intergenic not near genes chrX_15_16155001 chrX_16155001 RAL-406 2948 chrX 16222761 16222807 chrX 16231131 16231172 roo 12 8368 6.5 5.0 5.8 1.8 8411 chrX 16222761 intergenic not near genes chrX 16226966 intergenic not near genes chrX 16231172 intergenic not near genes chrX_12_16225001 chrX_16225001 RAL-406 2949 chrX 16295513 16295547 chrX 16295617 16295637 5 99 10.5 0.0 5.2 0.8 124 chrX 16295513 intron CG9911 - chrX 16295575 intron CG9911 - chrX 16295637 intron CG9911 - chrX_5_16295001 chrX_16295001 RAL-406 2950 chrX 16340647 16340695 chrX 16349824 16349872 roo 14 9171 3.5 5.5 4.5 2.5 9225 chrX 16340647 intergenic Dsp1 + chrX 16345260 intergenic not near genes chrX 16349872 intergenic sl + chrX_14_16345001 chrX_16345001 RAL-406 2951 chrX 16492625 16492675 chrX 16498222 16498270 mdg3 21 5594 6.5 3.0 4.8 3.6 5645 chrX 16492625 intron para - chrX 16495448 intron para - chrX 16498270 exon para - chrX_21_16495001 chrX_16495001 RAL-406 2952 chrX 16529426 16529440 chrX 16529557 16529571 5 131 0.5 9.5 5.0 0.8 145 chrX 16529426 intron para - chrX 16529498 intron para - chrX 16529571 intron para - chrX_5_16525001 chrX_16525001 RAL-406 2953 chrX 16689605 16689656 chrX 16689711 16689722 12 85 3.0 4.5 3.8 2.5 117 chrX 16689605 intron Sep4 - chrX 16689664 intron Sep4 - chrX 16689722 intron Sep4 - chrX_12_16685001 chrX_16685001 RAL-406 2954 chrX 16690116 16690131 chrX 16690221 16690235 4 105 5.0 0.0 2.5 1.1 119 chrX 16690116 intron Sep4 - chrX 16690176 intron Sep4 - chrX 16690235 intron Sep4 - chrX_4_16690001 chrX_16690001 RAL-406 2955 chrX 16764720 16764731 chrX 16764817 16764827 5 97 8.0 1.0 4.5 0.9 107 chrX 16764720 intron if - chrX 16764774 intron if - chrX 16764827 intron if - chrX_5_16760001 chrX_16760001 RAL-406 2956 chrX 5362890 5362958 chrX 16766478 16766480 4 11403538 8.0 13.0 10.5 0.3 11403590 chrX 5362890 intron SK + chrX 11064685 intergenic not near genes chrX 16766480 intron if - chrX_4_11060001 chrX_11060001 RAL-406 2957 chrX 16785256 16785297 chrX 16785380 16785420 16 123 4.0 4.0 4.0 3.2 164 chrX 16785256 3` UTR CG9609 - chrX 16785338 3` UTR CG9609 - chrX 16785420 3` UTR CG9609 - chrX_16_16785001 chrX_16785001 RAL-406 2958 chrX 16821215 16821258 chrX 16821315 16821359 6 101 7.0 0.0 3.5 1.3 144 chrX 16821215 intron CG4829 + chrX 16821287 intron CG4829 + chrX 16821359 intron CG4829 + chrX_6_16820001 chrX_16820001 RAL-406 2959 chrX 16833186 16833222 chrX 16833291 16833327 12 105 3.0 3.5 3.2 2.9 141 chrX 16833186 intron CG13004 - chrX 16833256 intron CG13004 - chrX 16833327 intron CG13004 - chrX_12_16830001 chrX_16830001 RAL-406 2960 chrX 16898079 16898115 chrX 16898179 16898214 5 100 7.0 1.0 4.0 1.0 135 chrX 16898079 intergenic not near genes chrX 16898146 intergenic not near genes chrX 16898214 intergenic not near genes chrX_5_16895001 chrX_16895001 RAL-406 2961 chrX 16906627 16906675 chrX 16906734 16906782 13 106 4.0 2.5 3.2 3.1 155 chrX 16906627 intron CR44754 - chrX 16906704 intron CR44754 - chrX 16906782 intron CR44754 - chrX_13_16905001 chrX_16905001 RAL-406 2962 chrX 17011983 17011999 chrX 17012050 17012072 4 79 0.5 3.5 2.0 1.3 89 chrX 17011983 intron CG45002 - chrX 17012028 intron CG45002 - chrX 17012072 intron CG45002 - chrX_4_17010001 chrX_17010001 RAL-406 2963 chrX 17037972 17038002 chrX 17038070 17038116 8 109 3.0 1.0 2.0 2.7 144 chrX 17037972 intron CG45002 - chrX 17038044 intron CG45002 - chrX 17038116 intron CG45002 - chrX_8_17035001 chrX_17035001 RAL-406 2964 chrX 17057920 17057963 chrX 17058181 17058224 pogo 7 261 2.0 3.0 2.5 2.0 304 chrX 17057920 intron CG45002 - chrX 17058072 intron CG45002 - chrX 17058224 intron CG45002 - chrX_7_17055001 chrX_17055001 RAL-406 2965 chrX 17063158 17063206 chrX 17063265 17063313 12 107 5.0 4.0 4.5 2.2 155 chrX 17063158 intron CG45002 - chrX 17063236 intron CG45002 - chrX 17063313 intron CG45002 - chrX_12_17060001 chrX_17060001 RAL-406 2966 chrX 17111220 17111259 chrX 17111352 17111401 11 130 2.5 5.0 3.8 2.3 181 chrX 17111220 intron CG5004 + chrX 17111310 intron CG5004 + chrX 17111401 intron CG5004 + chrX_11_17110001 chrX_17110001 RAL-406 2967 chrX 17112247 17112251 chrX 17112318 17112348 6 92 0.0 9.0 4.5 1.1 101 chrX 17112247 intron CG5004 + chrX 17112298 intron CG5004 + chrX 17112348 intron CG5004 + chrX_6_17110001 chrX_17110001 RAL-406 2968 chrX 17113556 17113564 chrX 17113639 17113652 4 92 0.0 6.0 3.0 1.0 96 chrX 17113556 intron CG5004 + chrX 17113604 intron CG5004 + chrX 17113652 intron CG5004 + chrX_4_17110001 chrX_17110001 RAL-406 2969 chrX 17129875 17129903 chrX 17129954 17129973 7 76 2.0 3.5 2.8 1.8 98 chrX 17129875 intron CG5004 + chrX 17129924 intron CG5004 + chrX 17129973 intron CG5004 + chrX_7_17125001 chrX_17125001 RAL-406 2970 chrX 17172213 17172254 chrX 17172309 17172350 9 96 2.0 0.0 1.0 4.5 137 chrX 17172213 intron baz + chrX 17172282 intron baz + chrX 17172350 intron baz + chrX_9_17170001 chrX_17170001 RAL-406 2971 chrX 17205833 17205855 chrX 17205943 17205965 9 110 4.5 7.5 6.0 1.3 132 chrX 17205833 intergenic not near genes chrX 17205899 intergenic not near genes chrX 17205965 intergenic CG32564 + chrX_9_17205001 chrX_17205001 RAL-406 2972 chrX 17211439 17211471 chrX 17212132 17212164 11 688 29.5 19.5 24.5 0.4 725 chrX 17211439 intergenic not near genes chrX 17211802 intergenic not near genes chrX 17212164 intergenic CG18258 + chrX_11_17210001 chrX_17210001 RAL-406 2973 chrX 17229936 17230194 chrX 17230059 17230273 16 105 6.5 8.0 7.2 2.0 337 chrX 17229936 intergenic CG10597 - chrX 17230104 intergenic CG10597 - chrX 17230273 intergenic CG10597 - chrX_16_17230001 chrX_17230001 RAL-406 2974 chrX 17275550 17275553 chrX 17275616 17275652 4 86 1.5 4.0 2.8 1.1 102 chrX 17275550 intron f + chrX 17275601 intron f + chrX 17275652 intron f + chrX_4_17275001 chrX_17275001 RAL-406 2975 chrX 17282862 17282901 chrX 17282960 17282974 8 91 1.0 1.0 1.0 4.0 112 chrX 17282862 intron CG5445 + chrX 17282918 5` UTR CG5445 + chrX 17282974 5` UTR CG5445 + chrX_8_17280001 chrX_17280001 RAL-406 2976 chrX 17290046 17290097 chrX 17290142 17290193 23 94 3.5 4.0 3.8 4.8 147 chrX 17290046 intron,intron CG5445 +,Fim - chrX 17290120 intron,intron CG5445 +,Fim - chrX 17290193 intron,intron CG5445 +,Fim - chrX_23_17290001 chrX_17290001 RAL-406 2977 chrX 17357523 17357537 chrX 17357637 17357651 7 114 2.5 1.0 1.8 2.5 128 chrX 17357523 intergenic not near genes chrX 17357587 intergenic not near genes chrX 17357651 intergenic not near genes chrX_7_17355001 chrX_17355001 RAL-406 2978 chrX 17427028 17427069 chrX 17427134 17427146 10 94 2.5 2.0 2.2 3.1 118 chrX 17427028 intron,intron CG12994 -,CG5613 + chrX 17427087 intron,intron CG12994 -,CG5613 + chrX 17427146 intron,intron CG12994 -,CG5613 + chrX_10_17425001 chrX_17425001 RAL-406 2979 chrX 17538476 17538514 chrX 17538791 17538825 5 314 7.0 4.5 5.8 0.7 349 chrX 17538476 intron CG43658 - chrX 17538650 intron CG43658 - chrX 17538825 intron CG43658 - chrX_5_17535001 chrX_17535001 RAL-406 2980 chrX 17544183 17544195 chrX 17544273 17544307 4 106 8.0 2.5 5.2 0.6 124 chrX 17544183 intron CG43658 - chrX 17544245 intron CG43658 - chrX 17544307 intron CG43658 - chrX_4_17540001 chrX_17540001 RAL-406 2981 chrX 17546948 17547003 chrX 17547101 17547156 8 153 1.5 2.5 2.0 2.7 208 chrX 17546948 intron CG43658 - chrX 17547052 intron CG43658 - chrX 17547156 intron CG43658 - chrX_8_17545001 chrX_17545001 RAL-406 2982 chrX 17685448 17685473 chrX 17685551 17685576 7 103 1.0 6.0 3.5 1.6 128 chrX 17685448 intron chas - chrX 17685512 intron chas - chrX 17685576 intron chas - chrX_7_17685001 chrX_17685001 RAL-406 2983 chrX 17708812 17708859 chrX 17708909 17708958 15 97 3.0 5.5 4.2 2.9 146 chrX 17708812 intron CG8173 - chrX 17708885 intron CG8173 - chrX 17708958 intron CG8173 - chrX_15_17705001 chrX_17705001 RAL-406 2984 chrX 17716574 17716604 chrX 17716681 17716701 5 105 4.5 0.5 2.5 1.4 127 chrX 17716574 intron CG42684 + chrX 17716638 intron CG42684 + chrX 17716701 intron CG42684 + chrX_5_17715001 chrX_17715001 RAL-406 2985 chrX 17731097 17731131 chrX 17731193 17731227 12 96 7.0 8.5 7.8 1.4 130 chrX 17731097 intron CG42684 + chrX 17731162 intron CG42684 + chrX 17731227 intron CG42684 + chrX_12_17730001 chrX_17730001 RAL-406 2986 chrX 17741321 17741371 chrX 17741487 17741537 7 166 0.0 6.5 3.2 1.7 216 chrX 17741321 intron CG42684 + chrX 17741429 intron CG42684 + chrX 17741537 intron CG42684 + chrX_7_17740001 chrX_17740001 RAL-406 2987 chrX 17784464 17784487 chrX 17784560 17784583 10 95 0.5 3.0 1.8 3.6 119 chrX 17784464 intergenic not near genes chrX 17784524 intergenic not near genes chrX 17784583 intergenic not near genes chrX_10_17780001 chrX_17780001 RAL-406 2988 chrX 17911834 17911876 chrX 17911942 17911984 17 107 0.0 7.0 3.5 3.8 150 chrX 17911834 intron CG6847 + chrX 17911909 intron CG6847 + chrX 17911984 intron CG6847 + chrX_17_17910001 chrX_17910001 RAL-406 2989 chrX 18003434 18003481 chrX 18003536 18003573 14 98 3.0 4.0 3.5 3.1 139 chrX 18003434 intron Sh - chrX 18003504 intron Sh - chrX 18003573 intron Sh - chrX_14_18000001 chrX_18000001 RAL-406 2990 chrX 18141068 18141096 chrX 18141162 18141192 12 94 2.5 8.5 5.5 1.8 124 chrX 18141068 intergenic not near genes chrX 18141130 intergenic not near genes chrX 18141192 intergenic not near genes chrX_12_18140001 chrX_18140001 RAL-406 2991 chrX 18148616 18148625 chrX 18148739 18148748 7 123 7.5 3.0 5.2 1.1 132 chrX 18148616 intergenic not near genes chrX 18148682 intergenic not near genes chrX 18148748 intergenic not near genes chrX_7_18145001 chrX_18145001 RAL-406 2992 chrX 18166445 18166489 chrX 18167068 18167117 9 621 1.0 3.5 2.2 2.8 672 chrX 18166445 intron Frq1 + chrX 18166781 intron Frq1 + chrX 18167117 intron Frq1 + chrX_9_18165001 chrX_18165001 RAL-406 2993 chrX 18194047 18194102 chrX 18194602 18194640 BS 11 553 5.0 2.5 3.8 2.3 593 chrX 18194047 intron Frq2 + chrX 18194344 intron Frq2 + chrX 18194640 intron Frq2 + chrX_11_18190001 chrX_18190001 RAL-406 2994 chrX 18218021 18218064 chrX 18218157 18218201 11 135 4.0 3.5 3.8 2.3 180 chrX 18218021 intron CG33639 - chrX 18218111 intron CG33639 - chrX 18218201 intron CG33639 - chrX_11_18215001 chrX_18215001 RAL-406 2995 chrX 18429480 18429521 chrX 18434809 18434846 Transpac 10 5330 4.5 6.0 5.2 1.6 5366 chrX 18429480 intergenic not near genes chrX 18432163 intergenic not near genes chrX 18434846 intergenic not near genes chrX_10_18430001 chrX_18430001 RAL-406 2996 chrX 18529375 18529396 chrX 18529471 18529492 5 95 6.0 4.0 5.0 0.8 117 chrX 18529375 intron,3` UTR Bx +,CG15047 + chrX 18529434 intron,3` UTR Bx +,CG15047 + chrX 18529492 intron,3` UTR Bx +,CG15047 + chrX_5_18525001 chrX_18525001 RAL-406 2997 chrX 18558756 18558804 chrX 18558858 18558906 11 99 1.0 3.5 2.2 3.4 150 chrX 18558756 intron Bx + chrX 18558831 intron Bx + chrX 18558906 intron Bx + chrX_11_18555001 chrX_18555001 RAL-406 2998 chrX 18645005 18645009 chrX 18645113 18645127 5 112 6.0 4.0 5.0 0.8 122 chrX 18645005 intron Rip11 - chrX 18645066 intron Rip11 - chrX 18645127 intron Rip11 - chrX_5_18645001 chrX_18645001 RAL-406 2999 chrX 18645012 18645047 chrX 18645111 18645165 13 112 2.0 4.0 3.0 3.2 153 chrX 18645012 intron Rip11 - chrX 18645088 intron Rip11 - chrX 18645165 intron Rip11 - chrX_13_18645001 chrX_18645001 RAL-406 3000 chrX 18671201 18671248 chrX 18671303 18671350 15 101 2.5 2.0 2.2 4.7 149 chrX 18671201 intergenic not near genes chrX 18671276 intergenic not near genes chrX 18671350 intergenic not near genes chrX_15_18670001 chrX_18670001 RAL-406 3001 chrX 18698831 18698875 chrX 18698968 18699012 5 135 3.5 10.0 6.8 0.6 181 chrX 18698831 intergenic not near genes chrX 18698922 intergenic not near genes chrX 18699012 intergenic not near genes chrX_5_18695001 chrX_18695001 RAL-406 3002 chrX 18723524 18723558 chrX 18723951 18723974 11 438 0.5 1.5 1.0 5.5 450 chrX 18723524 intron CCKLR-17D1 - chrX 18723749 intron CCKLR-17D1 - chrX 18723974 intron CCKLR-17D1 - chrX_11_18720001 chrX_18720001 RAL-406 3003 chrX 18780310 18780335 chrX 18780411 18780422 5 96 1.0 2.0 1.5 2.0 112 chrX 18780310 intron CG6891 + chrX 18780366 intron CG6891 + chrX 18780422 intron CG6891 + chrX_5_18780001 chrX_18780001 RAL-406 3004 chrX 18896497 18896548 chrX 18896628 18896679 14 131 4.0 4.0 4.0 2.8 182 chrX 18896497 3` UTR CG7349 + chrX 18896588 intergenic CG7349 + chrX 18896679 intergenic CG7349 + chrX_14_18895001 chrX_18895001 RAL-406 3005 chrX 18957049 18957101 chrX 18965732 18965784 roo 15 8681 3.0 5.5 4.2 2.9 8735 chrX 18957049 intron CG43759 + chrX 18961416 intron CG43759 + chrX 18965784 intron CG43759 + chrX_15_18960001 chrX_18960001 RAL-406 3006 chrX 19060394 19060435 chrX 19065197 19065239 Doc 21 4801 2.0 3.5 2.8 5.5 4845 chrX 19060394 intron CG14190 + chrX 19062816 intron CG14190 + chrX 19065239 intron CG14190 + chrX_21_19060001 chrX_19060001 RAL-406 3007 chrX 19073685 19073698 chrX 19073787 19073805 7 106 4.0 5.5 4.8 1.2 120 chrX 19073685 intergenic not near genes chrX 19073745 intergenic not near genes chrX 19073805 intergenic not near genes chrX_7_19070001 chrX_19070001 RAL-406 3008 chrX 19080315 19080358 chrX 19080431 19080471 16 120 5.0 1.5 3.2 3.8 156 chrX 19080315 intergenic not near genes chrX 19080393 intergenic not near genes chrX 19080471 intergenic not near genes chrX_16_19080001 chrX_19080001 RAL-406 3009 chrX 19099637 19099684 chrX 19099740 19099787 19 100 3.5 2.5 3.0 4.8 150 chrX 19099637 intergenic not near genes chrX 19099712 intergenic not near genes chrX 19099787 intergenic not near genes chrX_19_19095001 chrX_19095001 RAL-406 3010 chrX 19119680 19119716 chrX 19119786 19119811 16 105 7.0 0.0 3.5 3.6 131 chrX 19119680 intergenic not near genes chrX 19119746 intergenic not near genes chrX 19119811 intergenic not near genes chrX_16_19115001 chrX_19115001 RAL-406 3011 chrX 19124431 19124437 chrX 19124530 19124545 4 106 3.0 4.0 3.5 0.9 114 chrX 19124431 intergenic CG15882 - chrX 19124488 intergenic CG15882 - chrX 19124545 intergenic CG15882 -,tgy - chrX_4_19120001 chrX_19120001 RAL-406 3012 chrX 19125670 19125721 chrX 19125819 19125870 18 146 7.5 5.5 6.5 2.4 200 chrX 19125670 intron tgy - chrX 19125770 intron tgy - chrX 19125870 intron tgy - chrX_18_19125001 chrX_19125001 RAL-406 3013 chrX 19136534 19136585 chrX 19143474 19143522 412 10 6936 3.5 0.0 1.8 3.6 6988 chrX 19136534 intergenic not near genes chrX 19140028 intergenic not near genes chrX 19143522 3` UTR RhoGAP18B - chrX_10_19140001 chrX_19140001 RAL-406 3014 chrX 19330444 19330452 chrX 19330584 19330592 4 140 7.0 4.0 5.5 0.6 148 chrX 19330444 intron nAChRalpha7 - chrX 19330518 intron nAChRalpha7 - chrX 19330592 intron nAChRalpha7 - chrX_4_19330001 chrX_19330001 RAL-406 3015 chrX 19330468 19330484 chrX 19330582 19330604 5 118 5.0 3.0 4.0 1.0 136 chrX 19330468 intron nAChRalpha7 - chrX 19330536 intron nAChRalpha7 - chrX 19330604 intron nAChRalpha7 - chrX_5_19330001 chrX_19330001 RAL-406 3016 chrX 19339730 19339773 chrX 19339826 19339853 22 94 2.0 4.5 3.2 5.2 123 chrX 19339730 intron nAChRalpha7 - chrX 19339792 intron nAChRalpha7 - chrX 19339853 intron nAChRalpha7 - chrX_22_19335001 chrX_19335001 RAL-406 3017 chrX 19356970 19357022 chrX 19358430 19358500 NOF 13 1461 3.0 0.0 1.5 5.2 1530 chrX 19356970 intron kek5 + chrX 19357735 intron kek5 + chrX 19358500 intron kek5 + chrX_13_19355001 chrX_19355001 RAL-406 3018 chrX 19380154 19380177 chrX 19380403 19380438 pogo 9 255 3.5 7.5 5.5 1.4 284 chrX 19380154 intron kek5 + chrX 19380296 intron kek5 + chrX 19380438 intron kek5 + chrX_9_19380001 chrX_19380001 RAL-406 3019 chrX 19472108 19472147 chrX 19472698 19472701 jockey 6 576 1.0 3.5 2.2 1.9 593 chrX 19472108 intergenic kek5 + chrX 19472404 intergenic kek5 + chrX 19472701 intergenic not near genes chrX_6_19470001 chrX_19470001 RAL-406 3020 chrX 19472151 19472156 chrX 19472689 19472695 jockey 4 546 1.0 3.0 2.0 1.3 544 chrX 19472151 intergenic kek5 + chrX 19472423 intergenic not near genes chrX 19472695 intergenic not near genes chrX_4_19470001 chrX_19470001 RAL-406 3021 chrX 19553484 19553499 chrX 19553580 19553589 5 95 2.5 12.5 7.5 0.6 105 chrX 19553484 intergenic not near genes chrX 19553536 intergenic not near genes chrX 19553589 intergenic not near genes chrX_5_19550001 chrX_19550001 RAL-406 3022 chrX 19662022 19662056 chrX 19662255 19662299 4 238 6.5 3.5 5.0 0.7 277 chrX 19662022 intron CG14223 - chrX 19662160 intron CG14223 - chrX 19662299 intron CG14223 - chrX_4_19660001 chrX_19660001 RAL-406 3023 chrX 19710055 19710098 chrX 19711861 19711868 S-element 4 1795 4.0 10.0 7.0 0.5 1813 chrX 19710055 intron meso18E - chrX 19710962 intron meso18E - chrX 19711868 intron meso18E - chrX_4_19710001 chrX_19710001 RAL-406 3024 chrX 19827197 19827379 chrX 19827295 19827476 58 96 6.0 4.5 5.2 9.4 279 chrX 19827197 intergenic not near genes chrX 19827336 intergenic not near genes chrX 19827476 intergenic not near genes chrX_58_19825001 chrX_19825001 RAL-406 3025 chrX 19881442 19881471 chrX 19881542 19881572 15 99 12.0 7.5 9.8 1.4 130 chrX 19881442 intron Hers + chrX 19881507 intron Hers + chrX 19881572 intron Hers + chrX_15_19880001 chrX_19880001 RAL-406 3026 chrX 19881473 19881484 chrX 19881534 19881575 9 92 6.5 5.5 6.0 1.3 102 chrX 19881473 intron Hers + chrX 19881524 intron Hers + chrX 19881575 intron Hers + chrX_9_19880001 chrX_19880001 RAL-406 3027 chrX 19971806 19971819 chrX 19971903 19971910 5 96 3.5 10.0 6.8 0.6 104 chrX 19971806 intergenic not near genes chrX 19971858 intergenic not near genes chrX 19971910 intergenic not near genes chrX_5_19970001 chrX_19970001 RAL-406 3028 chrX 19983848 19983899 chrX 19983948 19983991 18 97 0.0 3.0 1.5 7.2 143 chrX 19983848 intergenic not near genes chrX 19983920 intergenic not near genes chrX 19983991 intergenic not near genes chrX_18_19980001 chrX_19980001 RAL-406 3029 chrX 20041510 20041562 chrX 20041610 20041662 35 98 6.0 4.5 5.2 5.6 152 chrX 20041510 intron Dop2R - chrX 20041586 intron Dop2R - chrX 20041662 intron Dop2R - chrX_35_20040001 chrX_20040001 RAL-406 3030 chrX 20082731 20082784 chrX 20082833 20082886 4 100 3.0 3.5 3.2 1.0 155 chrX 20082731 intergenic not near genes chrX 20082808 intergenic not near genes chrX 20082886 intergenic not near genes chrX_4_20080001 chrX_20080001 RAL-406 3031 chrX 20090056 20090103 chrX 20090163 20090199 19 104 2.5 3.0 2.8 5.0 143 chrX 20090056 intergenic not near genes chrX 20090128 intergenic not near genes chrX 20090199 intergenic CR45628 + chrX_19_20090001 chrX_20090001 RAL-406 3032 chrX 20125375 20125394 chrX 20125477 20125496 18 101 0.5 9.0 4.8 3.1 121 chrX 20125375 intergenic CG34331 + chrX 20125436 intergenic CG34331 + chrX 20125496 intergenic CG34331 + chrX_18_20125001 chrX_20125001 RAL-406 3033 chrX 20144292 20144311 chrX 20144392 20144411 5 97 4.0 6.5 5.2 0.8 119 chrX 20144292 intergenic not near genes chrX 20144352 intergenic not near genes chrX 20144411 intergenic not near genes chrX_5_20140001 chrX_20140001 RAL-406 3034 chrX 20257748 20257772 chrX 20257854 20257878 8 106 2.0 5.0 3.5 1.8 130 chrX 20257748 intergenic not near genes chrX 20257813 intergenic not near genes chrX 20257878 intergenic not near genes chrX_8_20255001 chrX_20255001 RAL-406 3035 chrX 20271484 20271528 chrX 20271596 20271633 8 109 3.5 0.0 1.8 2.9 149 chrX 20271484 intergenic not near genes chrX 20271558 intergenic not near genes chrX 20271633 intergenic not near genes chrX_8_20270001 chrX_20270001 RAL-406 3036 chrX 20312860 20312911 chrX 20312958 20313009 17 94 2.0 4.0 3.0 4.2 149 chrX 20312860 intron CG1504 - chrX 20312934 intron CG1504 - chrX 20313009 intron CG1504 - chrX_17_20310001 chrX_20310001 RAL-406 3037 chrX 20362855 20362880 chrX 20362952 20362975 7 93 1.5 0.0 0.8 3.9 120 chrX 20362855 intergenic not near genes chrX 20362915 intergenic not near genes chrX 20362975 intergenic not near genes chrX_7_20360001 chrX_20360001 RAL-406 3038 chrX 20371558 20371563 chrX 20371651 20371661 4 97 1.5 3.5 2.5 1.1 103 chrX 20371558 intergenic not near genes chrX 20371610 intergenic not near genes chrX 20371661 intergenic not near genes chrX_4_20370001 chrX_20370001 RAL-406 3039 chrX 20374072 20374124 chrX 20374168 20374200 8 90 1.0 6.0 3.5 1.8 128 chrX 20374072 intergenic not near genes chrX 20374136 intergenic not near genes chrX 20374200 intergenic not near genes chrX_8_20370001 chrX_20370001 RAL-406 3040 chrX 20484368 20484398 chrX 20484493 20484523 5 123 8.0 5.5 6.8 0.6 155 chrX 20484368 intron RhoGAP19D - chrX 20484446 intron RhoGAP19D - chrX 20484523 intron RhoGAP19D - chrX_5_20480001 chrX_20480001 RAL-406 3041 chrX 20493912 20493929 chrX 20494093 20494110 8 180 0.0 12.0 6.0 1.1 198 chrX 20493912 intron RhoGAP19D - chrX 20494011 intron RhoGAP19D - chrX 20494110 intron RhoGAP19D - chrX_8_20490001 chrX_20490001 RAL-406 3042 chrX 20578057 20578112 chrX 20578155 20578211 16 90 2.0 2.5 2.2 5.0 154 chrX 20578057 intergenic not near genes chrX 20578134 intergenic not near genes chrX 20578211 intergenic not near genes chrX_16_20575001 chrX_20575001 RAL-406 3043 chrX 20710415 20710422 chrX 20710513 20710520 6 98 3.0 4.0 3.5 1.3 105 chrX 20710415 intergenic not near genes chrX 20710468 intergenic not near genes chrX 20710520 intergenic not near genes chrX_6_20710001 chrX_20710001 RAL-406 3044 chrX 20710426 20710435 chrX 20710497 20710533 7 94 1.5 3.5 2.5 2.0 107 chrX 20710426 intergenic not near genes chrX 20710480 intergenic not near genes chrX 20710533 intergenic not near genes chrX_7_20710001 chrX_20710001 RAL-406 3045 chrX 20719190 20719199 chrX 20719531 20719552 8 349 2.0 3.5 2.8 2.1 362 chrX 20719190 intergenic not near genes chrX 20719371 intergenic not near genes chrX 20719552 intergenic not near genes chrX_8_20715001 chrX_20715001 RAL-406 3046 chrX 20780223 20780234 chrX 20780453 20780467 7 239 2.5 7.0 4.8 1.2 244 chrX 20780223 intron,3` UTR shakB -,CG32507 - chrX 20780345 intron,3` UTR shakB -,CG32507 - chrX 20780467 intron,3` UTR shakB -,CG32507 - chrX_7_20780001 chrX_20780001 RAL-406 3047 chrX 20836705 20836739 chrX 20844327 20844361 roo 9 7619 7.0 4.5 5.8 1.3 7656 chrX 20836705 intron shakB - chrX 20840533 intron shakB - chrX 20844361 intron shakB - chrX_9_20840001 chrX_20840001 RAL-406 3048 chrX 20836751 20836758 chrX 20844326 20844380 roo 4 7608 5.5 3.0 4.2 0.8 7629 chrX 20836751 intron shakB - chrX 20840566 intron shakB - chrX 20844380 intron shakB - chrX_4_20840001 chrX_20840001 RAL-406 3049 chrX 20940708 20940755 chrX 20942187 20942219 hobo 9 1479 5.5 3.5 4.5 1.6 1511 chrX 20940708 intergenic not near genes chrX 20941464 intergenic not near genes chrX 20942219 intergenic not near genes chrX_9_20940001 chrX_20940001 RAL-406 3050 chrX 20981006 20981012 chrX 20981129 20981135 4 123 18.5 3.0 10.8 0.3 129 chrX 20981006 intergenic not near genes chrX 20981070 intergenic not near genes chrX 20981135 intergenic not near genes chrX_4_20980001 chrX_20980001 RAL-406 3051 chrX 20981014 20981038 chrX 20981127 20981161 9 121 10.5 3.0 6.8 1.2 147 chrX 20981014 intergenic not near genes chrX 20981088 intergenic not near genes chrX 20981161 intergenic not near genes chrX_9_20980001 chrX_20980001 RAL-406 3052 chrX 21029787 21029807 chrX 21029938 21029968 9 160 4.5 8.5 6.5 1.2 181 chrX 21029787 3` UTR CG1529 - chrX 21029878 3` UTR CG1529 - chrX 21029968 3` UTR CG1529 - chrX_9_21025001 chrX_21025001 RAL-406 3053 chrX 21032264 21032281 chrX 21035255 21035266 Rt1b 7 2986 3.5 24.5 14.0 0.5 3002 chrX 21032264 intergenic CG1529 - chrX 21033765 intergenic not near genes chrX 21035266 intergenic Ntf-2 + chrX_7_21030001 chrX_21030001 RAL-406 3054 chrX 21042557 21042583 chrX 21045333 21045348 5 2772 27.5 8.5 18.0 0.3 2791 chrX 21042557 exon Mgstl + chrX 21043952 exon,3` UTR Mgstl +,CR44431 - chrX 21045348 5` UTR Cbs + chrX_5_21040001 chrX_21040001 RAL-406 3055 chrX 21042556 21042589 chrX 21045358 21045375 6 2792 28.5 10.0 19.2 0.3 2819 chrX 21042556 exon Mgstl + chrX 21043966 exon,3` UTR Mgstl +,CR44431 - chrX 21045375 intron Cbs + chrX_6_21040001 chrX_21040001 RAL-406 3056 chrX 21061852 21061895 chrX 21062356 21062379 roo 9 500 5.0 6.0 5.5 1.4 527 chrX 21061852 intron bves + chrX 21062116 intron bves + chrX 21062379 intron,3` UTR bves +,CG32512 - chrX_9_21060001 chrX_21060001 RAL-406 3057 chrX 21076309 21076356 chrX 21076408 21076455 21 97 6.5 0.5 3.5 4.7 146 chrX 21076309 intron bves + chrX 21076382 intron bves + chrX 21076455 intron bves + chrX_21_21075001 chrX_21075001 RAL-406 3058 chrX 21086146 21086157 chrX 21087166 21087206 jockey 10 1045 6.0 9.0 7.5 1.2 1060 chrX 21086146 intergenic not near genes chrX 21086676 intergenic not near genes chrX 21087206 intergenic not near genes chrX_10_21085001 chrX_21085001 RAL-406 3059 chrX 21088027 21088068 chrX 21088174 21088215 12 144 5.0 2.0 3.5 2.7 188 chrX 21088027 intergenic not near genes chrX 21088121 intergenic not near genes chrX 21088215 intergenic not near genes chrX_12_21085001 chrX_21085001 RAL-406 3060 chrX 21222071 21222092 chrX 21222170 21222191 7 100 4.0 5.0 4.5 1.3 120 chrX 21222071 intron CG32521 - chrX 21222131 intron CG32521 - chrX 21222191 intron CG32521 - chrX_7_21220001 chrX_21220001 RAL-406 3061 chrX 21328098 21328147 chrX 21328228 21328278 20 130 4.0 2.5 3.2 4.8 180 chrX 21328098 3` UTR CG1486 + chrX 21328188 intergenic CG1486 +,tty - chrX 21328278 intergenic CG1486 +,tty - chrX_20_21325001 chrX_21325001 RAL-406 3062 chrX 21410643 21410672 chrX 21410742 21410771 10 96 0.0 3.5 1.8 3.6 128 chrX 21410643 intergenic CR45003 - chrX 21410707 intergenic CR45003 - chrX 21410771 intergenic CR45003 - chrX_10_21410001 chrX_21410001 RAL-406 3063 chrX 21419192 21419245 chrX 21419297 21419300 18 100 5.5 7.0 6.2 2.5 108 chrX 21419192 intergenic not near genes chrX 21419246 intergenic not near genes chrX 21419300 intergenic not near genes chrX_18_21415001 chrX_21415001 RAL-406 3064 chrX 21455197 21455234 chrX 21455396 21455441 10 192 7.0 0.0 3.5 2.2 244 chrX 21455197 intron CG42343 - chrX 21455319 intron CG42343 - chrX 21455441 intron CG42343 - chrX_10_21455001 chrX_21455001 RAL-406 3065 chrX 21458684 21458721 chrX 21464140 21464157 Ivk 12 5453 5.5 7.0 6.2 1.7 5473 chrX 21458684 intergenic not near genes chrX 21461420 intergenic not near genes chrX 21464157 intergenic not near genes chrX_12_21460001 chrX_21460001 RAL-406 3066 chrX 21565396 21565433 chrX 21565494 21565531 17 96 5.0 4.0 4.5 3.1 135 chrX 21565396 intergenic not near genes chrX 21565464 intergenic not near genes chrX 21565531 intergenic not near genes chrX_17_21565001 chrX_21565001 RAL-406 3067 chrX 21565435 21565438 chrX 21565493 21565536 4 86 4.5 4.0 4.2 0.8 101 chrX 21565435 intergenic not near genes chrX 21565486 intergenic not near genes chrX 21565536 intergenic not near genes chrX_4_21565001 chrX_21565001 RAL-406 3068 chrX 21668243 21668289 chrX 21668343 21668376 13 99 1.5 1.0 1.2 5.9 133 chrX 21668243 intergenic not near genes chrX 21668310 intergenic not near genes chrX 21668376 intergenic not near genes chrX_13_21665001 chrX_21665001 RAL-406 3069 chrX 22448250 22448294 chrX 22448409 22448453 5 159 4.5 4.0 4.2 1.0 203 chrX 22448250 intron CG14615 - chrX 22448352 intron CG14615 - chrX 22448453 intron CG14615 - chrX_5_22445001 chrX_22445001 RAL-406 3070 chrX 22478873 22478893 chrX 22479021 22479040 15 151 1.0 7.0 4.0 3.0 167 chrX 22478873 intron CG12576 - chrX 22478956 intron CG12576 - chrX 22479040 intron CG12576 - chrX_15_22475001 chrX_22475001 RAL-406 3071 chrX 22522609 22522640 chrX 22525449 22525454 NOF 11 2836 7.0 7.0 7.0 1.4 2845 chrX 22522609 intron CG17600 + chrX 22524032 intron CG17600 + chrX 22525454 intron CG17600 + chrX_11_22520001 chrX_22520001 RAL-406 3072 chrX 22564562 22564575 chrX 22575117 22575134 jockey 4 10553 20.5 12.0 16.2 0.2 10572 chrX 22564562 intergenic not near genes chrX 22569848 intergenic not near genes chrX 22575134 intergenic not near genes chrX_4_22565001 chrX_22565001 RAL-406 3073 chrX 22658134 22658181 chrX 22658324 22658371 14 189 2.5 3.0 2.8 3.7 237 chrX 22658134 intron CR44997 + chrX 22658252 intron CR44997 + chrX 22658371 intron CR44997 + chrX_14_22655001 chrX_22655001 RAL-406 3074 chrX 22658493 22658541 chrX 22658617 22658663 18 123 8.5 2.5 5.5 2.8 170 chrX 22658493 intron CR44997 + chrX 22658578 intron CR44997 + chrX 22658663 intron CR44997 + chrX_18_22655001 chrX_22655001 RAL-406 3075 chrX 22677278 22677297 chrX 22677507 22677517 8 226 8.5 5.5 7.0 1.0 239 chrX 22677278 intron CR44997 + chrX 22677398 intron CR44997 + chrX 22677517 intron CR44997 + chrX_8_22675001 chrX_22675001 RAL-406 3076 chrX 22677299 22677321 chrX 22677501 22677548 6 218 5.5 5.0 5.2 1.0 249 chrX 22677299 intron CR44997 + chrX 22677424 intron CR44997 + chrX 22677548 intron CR44997 + chrX_6_22675001 chrX_22675001 RAL-406 3077 chrX 22694305 22694350 chrX 22694415 22694460 8 108 3.0 1.0 2.0 2.7 155 chrX 22694305 intron CR44997 + chrX 22694382 intron CR44997 + chrX 22694460 intron CR44997 + chrX_8_22690001 chrX_22690001 RAL-406 3078 chrX 22771486 22771534 chrX 22774797 22774844 297 11 3307 3.0 2.5 2.8 2.9 3358 chrX 22771486 intron CR44997 + chrX 22773165 intron CR44997 + chrX 22774844 intron CR44997 + chrX_11_22770001 chrX_22770001 RAL-406 3079 chrX 22776363 22776380 chrX 22776671 22776688 4 308 0.0 5.0 2.5 1.1 325 chrX 22776363 intron CR44997 + chrX 22776526 intron CR44997 + chrX 22776688 intron CR44997 + chrX_4_22775001 chrX_22775001 RAL-406 3080 chrX 22792212 22792247 chrX 22792360 22792384 11 152 5.0 2.0 3.5 2.4 172 chrX 22792212 intron CR44997 + chrX 22792298 intron CR44997 + chrX 22792384 intron CR44997 + chrX_11_22790001 chrX_22790001 RAL-406 3081 chrX 22798762 22798795 chrX 22798890 22798932 9 133 1.5 4.5 3.0 2.2 170 chrX 22798762 intergenic not near genes chrX 22798847 intergenic not near genes chrX 22798932 intergenic not near genes chrX_9_22795001 chrX_22795001 RAL-406 3082 chrX 22811978 22812003 chrX 22816771 22816796 F-element 7 4793 7.5 4.5 6.0 1.0 4818 chrX 22811978 intergenic CG12446 - chrX 22814387 intergenic not near genes chrX 22816796 intergenic not near genes chrX_7_22810001 chrX_22810001 RAL-406 3083 chrX 22824224 22824450 chrX 22824360 22824565 29 144 3.5 6.5 5.0 4.8 341 chrX 22824224 intergenic fog - chrX 22824394 3` UTR fog - chrX 22824565 3` UTR fog - chrX_29_22820001 chrX_22820001 RAL-406 3084 chrX 22982822 22982872 chrX 22983025 22983070 19 198 1.5 3.0 2.2 5.9 248 chrX 22982822 3` UTR,exon stnA -,stnB - chrX 22982946 intron,intron stnA -,stnB - chrX 22983070 intron,intron stnA -,stnB - chrX_19_22980001 chrX_22980001 RAL-406 3085 chrX 22987083 22987119 chrX 22989762 22989798 Burdock 7 2672 8.5 3.0 5.8 1.0 2715 chrX 22987083 intron,intron stnA -,stnB - chrX 22988440 intron,intron stnA -,stnB - chrX 22989798 intron,intron stnA -,stnB - chrX_7_22985001 chrX_22985001 RAL-406 3086 chrX 22996307 22996336 chrX 23003561 23003590 roo 8 7253 5.5 10.5 8.0 0.9 7283 chrX 22996307 intron,intron stnA -,stnB - chrX 22999948 intron,intron stnA -,stnB - chrX 23003590 intron,intron stnA -,stnB - chrX_8_22995001 chrX_22995001 RAL-406 3087 chrY 864698 864741 chrY 864795 864798 6 89 35.0 34.5 34.8 0.2 100 chrY 864698 intergenic not near genes chrY 864748 intergenic not near genes chrY 864798 intergenic not near genes chrY_6_860001 chrY_860001 RAL-406 3088 chrY 1419898 1419913 chrY 1420158 1420186 8 268 19.5 18.5 19.0 0.4 288 chrY 1419898 intergenic not near genes chrY 1420042 intergenic not near genes chrY 1420186 intergenic not near genes chrY_8_1420001 chrY_1420001 RAL-406 3089 chrY 3666434 3666461 chrY 3666595 3666634 4 170 2.0 1.5 1.8 1.4 200 chrY 3666434 intergenic not near genes chrY 3666534 intergenic not near genes chrY 3666634 intergenic not near genes chrY_4_3665001 chrY_3665001 RAL-406