SV#	Chr	Chr_coord_5p	Chr_coord_3p	TE	TE_coord_start	TE_coord_end	Reads_collapsed	Chr_Coord_Dist	Symmetry	avg_blat_score	Norm_RefGen_Reads	Coverage_Ratio	classification	comments	insert_code	loci_code	Sym_score	libname
1	chr2L	512634	512747	mdg3	5254	240	16	113	'11-5	67.71	4.2	3.1	intron	ush +	chr2L_16_510001	chr2L_510001	0.69	RAL-392
2	chr2L	854935	855054	Transpac	4920	5227	31	119	'23-8	67.31	8.2	3.4	intergenic	kraken +	chr2L_31_850001	chr2L_850001	0.74	RAL-392
3	chr2L	903798	903903	1360	12	2	38	105	'15-23	63.31	4.3	7.2	intergenic	CR45261 +	chr2L_38_900001	chr2L_900001	0.39	RAL-392
4	chr2L	1093363	1093454	blood	7031	7385	21	91	'12-9	54.82	7.2	2.6	intron	CG4629 -	chr2L_21_1090001	chr2L_1090001	0.57	RAL-392
5	chr2L	1302298	1302340	Bari1	9	2	16	42	'7-9	64.16	8.5	1.7	intergenic	not near genes	chr2L_16_1300001	chr2L_1300001	0.44	RAL-392
6	chr2L	1331883	1331994	blood	7388	7020	19	111	'8-11	65.00	7.5	2.2	intergenic	not near genes	chr2L_19_1330001	chr2L_1330001	0.42	RAL-392
7	chr2L	1574937	1575042	opus	486	4	16	105	'9-7	65.05	9.1	1.6	intron	haf +	chr2L_16_1570001	chr2L_1570001	0.56	RAL-392
8	chr2L	1737403	1737462	P-element	2871	2885	6	59	'4-2	49.32	3.2	1.4	intron	CG17646 +	chr2L_6_1735001	chr2L_1735001	0.67	RAL-392
9	chr2L	1817444	1817508	Transpac	299	4936	20	64	'2-18	60.42	10.3	1.8	intergenic	not near genes	chr2L_20_1815001	chr2L_1815001	0.10	RAL-392
10	chr2L	1922568	1922597	BS	5029	5000	12	29	'8-4	51.96	5.5	1.8	intron	CG7337 +	chr2L_12_1920001	chr2L_1920001	0.67	RAL-392
11	chr2L	1933698	1933799	Burdock	255	6156	21	101	'13-8	65.22	8.0	2.3	intron	CG7337 +	chr2L_21_1930001	chr2L_1930001	0.62	RAL-392
12	chr2L	2621559	2621602	BS	5081	5038	21	43	'8-13	64.41	6.3	2.9	intergenic	not near genes	chr2L_21_2620001	chr2L_2620001	0.38	RAL-392
13	chr2L	2648333	2648430	mdg1	7445	3	12	97	'2-10	62.21	4.8	2.1	exon	CG43851 +	chr2L_12_2645001	chr2L_2645001	0.17	RAL-392
14	chr2L	3248820	3248901	412	7539	7086	17	81	'10-7	60.99	4.9	2.9	intergenic	not near genes	chr2L_17_3245001	chr2L_3245001	0.59	RAL-392
15	chr2L	3267714	3267761	copia	4899	4877	11	47	'5-6	66.38	7.6	1.3	intergenic	not near genes	chr2L_11_3265001	chr2L_3265001	0.45	RAL-392
16	chr2L	3418621	3418699	Bari1	40	1702	5	78	'1-4	69.08	7.7	0.6	intron	pgant2 -	chr2L_5_3415001	chr2L_3415001	0.20	RAL-392
17	chr2L	3428886	3428992	mdg1	415	9	33	106	'22-11	65.47	5.2	5.3	intergenic	not near genes	chr2L_33_3425001	chr2L_3425001	0.67	RAL-392
18	chr2L	3520030	3520131	I-element	5344	2	13	101	'8-5	60.66	5.1	2.1	intron	CG8851 +	chr2L_13_3520001	chr2L_3520001	0.62	RAL-392
19	chr2L	3877086	3877192	Quasimodo	2	7356	6	106	'4-2	67.75	6.9	0.8	intron	capu -	chr2L_6_3875001	chr2L_3875001	0.67	RAL-392
20	chr2L	3902415	3902523	Bari1	1695	5	7	108	'2-5	66.87	7.8	0.8	intron	capu -	chr2L_7_3900001	chr2L_3900001	0.29	RAL-392
21	chr2L	4176963	4177006	hobo	2709	2929	6	43	'5-1	65.90	6.9	0.8	intergenic	not near genes	chr2L_6_4175001	chr2L_4175001	0.83	RAL-392
22	chr2L	4345899	4345941	BS	5036	4990	15	42	'8-7	59.68	4.1	2.9	intergenic	Atet +	chr2L_15_4345001	chr2L_4345001	0.53	RAL-392
23	chr2L	4438673	4438721	jockey	4760	4778	13	48	'5-8	64.56	4.0	2.6	intron	CG15431 -	chr2L_13_4435001	chr2L_4435001	0.38	RAL-392
24	chr2L	4806095	4806163	roo	389	8663	7	68	'2-5	59.93	7.5	0.8	intergenic	not near genes	chr2L_7_4805001	chr2L_4805001	0.29	RAL-392
25	chr2L	5698786	5698897	1360	3383	3387	18	111	'8-10	64.91	6.4	2.4	intergenic	not near genes	chr2L_18_5695001	chr2L_5695001	0.44	RAL-392
26	chr2L	5809064	5809162	pogo	3	2078	15	98	'10-5	64.20	5.5	2.3	intergenic	CG11034 +	chr2L_15_5805001	chr2L_5805001	0.67	RAL-392
27	chr2L	6132403	6132516	Bari1	1705	3	9	113	'5-4	65.99	11.9	0.7	3` UTR	CG9222 +	chr2L_9_6130001	chr2L_6130001	0.56	RAL-392
28	chr2L	6505344	6505462	412	494	4	22	118	'10-12	66.09	9.6	2.1	intron	CG31637 +	chr2L_22_6505001	chr2L_6505001	0.45	RAL-392
29	chr2L	6524318	6524430	Quasimodo	6	7363	18	112	'9-9	66.01	6.9	2.3	intron	CG31637 +	chr2L_18_6520001	chr2L_6520001	0.50	RAL-392
30	chr2L	6611868	6611973	297	6963	6586	24	105	'17-7	67.67	6.5	3.2	intron	CG11050 +	chr2L_24_6610001	chr2L_6610001	0.71	RAL-392
31	chr2L	7572245	7572277	FB	29	6	5	32	'2-3	65.33	4.8	0.9	intron	RapGAP1 -	chr2L_5_7570001	chr2L_7570001	0.40	RAL-392
32	chr2L	7927874	7927901	X-element	60	33	5	27	'2-3	61.26	5.7	0.7	intron	Snoo -	chr2L_5_7925001	chr2L_7925001	0.40	RAL-392
33	chr2L	8227318	8227353	F-element	139	182	11	35	'4-7	58.71	4.3	2.1	intron	Pvr -	chr2L_11_8225001	chr2L_8225001	0.36	RAL-392
34	chr2L	8471819	8471935	roo	6	411	22	116	'12-10	65.17	8.6	2.3	intron	d +	chr2L_22_8470001	chr2L_8470001	0.55	RAL-392
35	chr2L	8521562	8521674	gypsy	6	7446	27	112	'16-11	67.54	10.1	2.4	exon	CG13091 +	chr2L_27_8520001	chr2L_8520001	0.59	RAL-392
36	chr2L	8692902	8693000	297	6592	6962	14	98	'8-6	63.84	6.1	2.0	intron	Hnf4 -	chr2L_14_8690001	chr2L_8690001	0.57	RAL-392
37	chr2L	9010677	9010777	Stalker2	396	7256	27	100	'9-18	63.20	5.6	4.1	exon	CG9568 +	chr2L_27_9010001	chr2L_9010001	0.33	RAL-392
38	chr2L	9011653	9011752	blood	6	369	23	99	'16-7	66.70	4.4	4.3	intergenic	CG9568 +	chr2L_23_9010001	chr2L_9010001	0.70	RAL-392
39	chr2L	9078379	9078424	Doc	34	9	10	45	'7-3	58.70	1.1	4.8	intergenic	CG12439 +	chr2L_10_9075001	chr2L_9075001	0.70	RAL-392
40	chr2L	9082307	9082405	412	485	7068	10	98	'2-8	57.40	0.8	5.6	intergenic	not near genes	chr2L_10_9080001	chr2L_9080001	0.20	RAL-392
41	chr2L	9256454	9256506	hobo	2916	1	9	52	'3-6	63.99	4.3	1.7	intergenic	Ggamma30A +	chr2L_9_9255001	chr2L_9255001	0.33	RAL-392
42	chr2L	9287269	9287297	jockey	4954	4977	9	28	'4-5	59.64	8.2	1.0	intron	Ggamma30A +	chr2L_9_9285001	chr2L_9285001	0.44	RAL-392
43	chr2L	9310367	9310472	hobo	7	2707	23	105	'12-11	64.41	8.3	2.5	intergenic	not near genes	chr2L_23_9310001	chr2L_9310001	0.52	RAL-392
44	chr2L	9347811	9347931	412	494	2	30	120	'14-16	62.18	3.7	6.4	intergenic	not near genes	chr2L_30_9345001	chr2L_9345001	0.47	RAL-392
45	chr2L	9522972	9523050	P-element	1	2848	12	78	'2-10	46.65	4.0	2.4	intron	Oatp30B +	chr2L_12_9520001	chr2L_9520001	0.17	RAL-392
46	chr2L	10172600	10172674	hobo	2921	1	6	74	'2-4	54.57	6.1	0.8	intron	CG44153 -	chr2L_6_10170001	chr2L_10170001	0.33	RAL-392
47	chr2L	10814881	10814909	I-element	5342	5311	8	28	'2-6	67.40	10.1	0.7	intron	Nos -	chr2L_8_10810001	chr2L_10810001	0.25	RAL-392
48	chr2L	10816791	10816902	297	5	6969	4	111	'1-3	66.88	3.3	0.9	intron	Nos -	chr2L_4_10815001	chr2L_10815001	0.25	RAL-392
49	chr2L	11047958	11048001	Juan	4207	4164	17	43	'8-9	66.11	7.2	2.1	intron	Samuel -	chr2L_17_11045001	chr2L_11045001	0.47	RAL-392
50	chr2L	11595427	11595542	opus	7	499	11	115	'1-10	67.95	5.6	1.7	intron	kek2 +	chr2L_11_11595001	chr2L_11595001	0.09	RAL-392
51	chr2L	11838362	11838439	roo	3	406	8	77	'5-3	69.10	8.2	0.9	intron	Pde1c -	chr2L_8_11835001	chr2L_11835001	0.62	RAL-392
52	chr2L	11936689	11936800	Stalker2	7248	7640	26	111	'14-12	62.60	7.2	3.2	exon	Or33b +	chr2L_26_11935001	chr2L_11935001	0.54	RAL-392
53	chr2L	12228281	12228317	jockey	4948	4984	14	36	'7-7	59.42	10.3	1.2	intron	aret +	chr2L_14_12225001	chr2L_12225001	0.50	RAL-392
54	chr2L	12381889	12381970	roo	1	398	15	81	'9-6	65.53	10.6	1.3	intron	bru-2 +	chr2L_15_12380001	chr2L_12380001	0.60	RAL-392
55	chr2L	12455182	12455265	jockey	4670	4972	21	83	'8-13	65.76	8.4	2.2	intergenic	bun -	chr2L_21_12455001	chr2L_12455001	0.38	RAL-392
56	chr2L	12807207	12807317	Transpac	302	4	24	110	'6-18	65.76	5.6	3.6	intergenic	CR43818 -	chr2L_24_12805001	chr2L_12805001	0.25	RAL-392
57	chr2L	12906198	12906290	297	6581	384	13	92	'4-9	62.75	6.9	1.6	intergenic	not near genes	chr2L_13_12905001	chr2L_12905001	0.31	RAL-392
58	chr2L	12984186	12984223	hobo	2921	25	5	37	'1-4	60.14	7.6	0.6	intergenic	not near genes	chr2L_5_12980001	chr2L_12980001	0.20	RAL-392
59	chr2L	13328493	13328531	jockey	4668	4696	8	38	'2-6	63.80	8.1	0.9	intron	CG43778 -	chr2L_8_13325001	chr2L_13325001	0.25	RAL-392
60	chr2L	13520790	13520877	roo	411	8677	19	87	'12-7	66.94	7.4	2.3	intron	B4 -	chr2L_19_13520001	chr2L_13520001	0.63	RAL-392
61	chr2L	13728051	13728104	blood	7107	7072	14	53	'6-8	66.51	4.2	2.7	intergenic	not near genes	chr2L_14_13725001	chr2L_13725001	0.43	RAL-392
62	chr2L	13804323	13804406	roo	403	17	14	83	'6-8	67.16	10.2	1.2	intron	CAH1 +	chr2L_14_13800001	chr2L_13800001	0.43	RAL-392
63	chr2L	14139001	14139078	hobo	4	2902	7	77	'4-3	61.95	7.6	0.8	intron	CG17341 +	chr2L_7_14135001	chr2L_14135001	0.57	RAL-392
64	chr2L	14318955	14319067	297	6582	6972	9	112	'1-8	70.17	6.5	1.2	intron	wb +	chr2L_9_14315001	chr2L_14315001	0.11	RAL-392
65	chr2L	14346778	14346892	3S18	6105	5	32	114	'12-20	65.55	8.7	3.3	intergenic	Send2 -,mTTF -	chr2L_32_14345001	chr2L_14345001	0.38	RAL-392
66	chr2L	14361413	14361523	Juan	4154	4205	36	110	'20-16	63.50	8.6	3.8	intergenic	Pgant35A +,CR43463 -	chr2L_36_14360001	chr2L_14360001	0.56	RAL-392
67	chr2L	14533616	14533726	flea	4760	5006	23	110	'13-10	68.26	6.7	3.0	intergenic	CR44852 -	chr2L_23_14530001	chr2L_14530001	0.57	RAL-392
68	chr2L	14618851	14618889	hopper	1414	1377	18	38	'7-11	53.75	12.8	1.3	intron,3` UTR,3` UTR	osp -,Adh +,Adhr +	chr2L_18_14615001	chr2L_14615001	0.39	RAL-392
69	chr2L	14950927	14950991	I-element	5349	8	11	64	'10-1	63.02	8.5	1.2	intron	CG42313 -	chr2L_11_14950001	chr2L_14950001	0.91	RAL-392
70	chr2L	15142234	15142327	BS	4709	5085	19	93	'12-7	63.79	5.6	2.9	intergenic	not near genes	chr2L_19_15140001	chr2L_15140001	0.63	RAL-392
71	chr2L	15200647	15200735	P-element	11	6	17	88	'6-11	48.05	5.0	2.8	intergenic	CG4168 -	chr2L_17_15200001	chr2L_15200001	0.35	RAL-392
72	chr2L	15543299	15543417	roo	409	8663	16	118	'6-10	64.92	1.3	7.0	intergenic	not near genes	chr2L_16_15540001	chr2L_15540001	0.38	RAL-392
73	chr2L	15903335	15903385	jockey	5	56	17	50	'10-7	66.88	10.4	1.5	intergenic	not near genes	chr2L_17_15900001	chr2L_15900001	0.59	RAL-392
74	chr2L	16218279	16218322	Max-element	8259	8244	7	43	'3-4	69.09	8.3	0.8	intergenic	not near genes	chr2L_7_16215001	chr2L_16215001	0.43	RAL-392
75	chr2L	16493233	16493308	S-element	2	1708	6	75	'5-1	67.08	6.2	0.8	intron	Tpr2 +	chr2L_6_16490001	chr2L_16490001	0.83	RAL-392
76	chr2L	16495781	16495867	FB	30	1	15	86	'9-6	63.49	5.9	2.2	intron	Tpr2 +	chr2L_15_16495001	chr2L_16495001	0.60	RAL-392
77	chr2L	16616801	16616895	HMS-Beagle	228	6803	24	94	'7-17	67.22	6.5	3.2	intron	CG42389 +	chr2L_24_16615001	chr2L_16615001	0.29	RAL-392
78	chr2L	16858414	16858646	P-element	10	2885	20	232	'14-6	46.46	1.9	6.9	exon	CG31809 -	chr2L_20_16855001	chr2L_16855001	0.70	RAL-392
79	chr2L	16995520	16995608	roo	405	9	20	88	'13-7	67.40	3.4	4.5	intergenic	not near genes	chr2L_20_16995001	chr2L_16995001	0.65	RAL-392
80	chr2L	17082936	17082962	micropia	4993	4965	6	26	'3-3	60.56	15.5	0.4	intergenic	not near genes	chr2L_6_17080001	chr2L_17080001	0.50	RAL-392
81	chr2L	17083515	17083566	micropia	458	5432	4	51	'3-1	74.08	16.7	0.2	intergenic	not near genes	chr2L_4_17080001	chr2L_17080001	0.75	RAL-392
82	chr2L	17091077	17091189	hopper	5	4	10	112	'5-5	63.41	5.3	1.6	intergenic	not near genes	chr2L_10_17090001	chr2L_17090001	0.50	RAL-392
83	chr2L	17425718	17425826	Rt1b	124	121	5	108	'4-1	70.24	4.1	1.0	intron	Dif -	chr2L_5_17425001	chr2L_17425001	0.80	RAL-392
84	chr2L	17456524	17456624	Bari1	1691	9	22	100	'14-8	65.67	4.6	3.9	intron	CG5050 +	chr2L_22_17455001	chr2L_17455001	0.64	RAL-392
85	chr2L	17557474	17557506	jockey	4774	4773	6	32	'4-2	59.31	7.9	0.7	intergenic	not near genes	chr2L_6_17555001	chr2L_17555001	0.67	RAL-392
86	chr2L	17687353	17687470	roo	8666	410	23	117	'10-13	66.55	3.1	5.6	intron	CadN -	chr2L_23_17685001	chr2L_17685001	0.43	RAL-392
87	chr2L	17720230	17720305	hopper	1377	1412	10	75	'4-6	63.93	4.5	1.8	intron	CadN -	chr2L_10_17720001	chr2L_17720001	0.40	RAL-392
88	chr2L	17730446	17730542	pogo	2081	3	18	96	'6-12	67.98	5.3	2.9	intron	CadN -	chr2L_18_17730001	chr2L_17730001	0.33	RAL-392
89	chr2L	17998244	17998324	BS	7	5062	5	80	'3-2	54.90	2.2	1.6	intergenic	not near genes	chr2L_5_17995001	chr2L_17995001	0.60	RAL-392
90	chr2L	18159014	18159063	INE-1	77	170	9	49	'2-7	48.72	6.9	1.1	intron	CG7200 -	chr2L_9_18155001	chr2L_18155001	0.22	RAL-392
91	chr2L	18207621	18207703	Tc3	318	236	4	82	'3-1	77.83	6.0	0.6	intron	CG42750 -	chr2L_4_18205001	chr2L_18205001	0.75	RAL-392
92	chr2L	18207623	18207709	1360	3383	3380	16	86	'3-13	66.84	6.3	2.2	intron	CG42750 -	chr2L_16_18205001	chr2L_18205001	0.19	RAL-392
93	chr2L	18211995	18212084	hopper	3	5	7	89	'5-2	64.73	5.1	1.1	intron	CG42750 -	chr2L_7_18210001	chr2L_18210001	0.71	RAL-392
94	chr2L	18570479	18570560	FB	14	5	15	81	'1-14	63.40	3.5	3.3	intron	Pde11 -	chr2L_15_18570001	chr2L_18570001	0.07	RAL-392
95	chr2L	18993361	18993425	Bari1	1687	26	9	64	'7-2	63.16	14.2	0.6	3` UTR	CG10650 -	chr2L_9_18990001	chr2L_18990001	0.78	RAL-392
96	chr2L	19565440	19565483	jockey	4983	4989	13	43	'7-6	63.10	8.6	1.4	intergenic	CG13078 +,CG13077 +	chr2L_13_19565001	chr2L_19565001	0.54	RAL-392
97	chr2L	19791854	19791960	P-element	2841	4	35	106	'21-14	47.64	9.9	3.2	5` UTR	CdGAPr -	chr2L_35_19790001	chr2L_19790001	0.60	RAL-392
98	chr2L	20128471	20128580	hobo	9	2710	10	109	'7-3	67.56	5.9	1.4	intergenic	not near genes	chr2L_10_20125001	chr2L_20125001	0.70	RAL-392
99	chr2L	20145551	20145653	flea	4758	5003	23	102	'4-19	68.92	6.5	3.1	intergenic	not near genes	chr2L_23_20145001	chr2L_20145001	0.17	RAL-392
100	chr2L	20367348	20367393	Doc	41	1	21	45	'11-10	62.31	9.2	2.1	intergenic	not near genes	chr2L_21_20365001	chr2L_20365001	0.52	RAL-392
101	chr2L	20841802	20841901	I-element	4967	5347	29	99	'10-19	61.88	6.9	3.7	intron	CG31676 +	chr2L_29_20840001	chr2L_20840001	0.34	RAL-392
102	chr2L	20917448	20917551	P-element	9	1	20	103	'4-16	55.01	6.5	2.7	intron,intron	CG43739 -,sky -	chr2L_20_20915001	chr2L_20915001	0.20	RAL-392
103	chr2L	20928052	20928087	Chimpo	6	41	5	35	'1-4	61.37	2.6	1.4	intergenic	CG9272 -	chr2L_5_20925001	chr2L_20925001	0.20	RAL-392
104	chr2L	20934740	20934859	297	6582	392	17	119	'5-12	68.78	6.2	2.4	intergenic	not near genes	chr2L_17_20930001	chr2L_20930001	0.29	RAL-392
105	chr2L	20939498	20939599	hopper	1413	6	8	101	'3-5	65.03	8.9	0.8	intergenic	not near genes	chr2L_8_20935001	chr2L_20935001	0.38	RAL-392
106	chr2L	21345521	21345589	copia	4875	5083	20	68	'8-12	69.25	7.9	2.2	intron	Tsp39D +	chr2L_20_21345001	chr2L_21345001	0.40	RAL-392
107	chr2L	21570232	21570271	Dm88	4393	5	12	39	'6-6	64.46	3.4	2.7	intergenic	not near genes	chr2L_12_21570001	chr2L_21570001	0.50	RAL-392
108	chr2L	21625505	21625536	INE-1	147	147	6	31	'1-5	59.03	8.8	0.6	5` UTR	CR43148 +	chr2L_6_21625001	chr2L_21625001	0.17	RAL-392
109	chr2L	21687106	21687153	mariner2	846	888	4	47	'3-1	64.00	5.7	0.6	intron	CG31619 +	chr2L_4_21685001	chr2L_21685001	0.75	RAL-392
110	chr2L	21761534	21761623	INE-1	84	80	4	89	'1-3	61.40	7.3	0.5	intergenic	not near genes	chr2L_4_21760001	chr2L_21760001	0.25	RAL-392
111	chr2L	21855407	21855507	Juan	4210	4061	24	100	'15-9	63.96	5.4	3.8	5` UTR	CR44917 +	chr2L_24_21855001	chr2L_21855001	0.62	RAL-392
112	chr2L	21863325	21863424	Burdock	6140	6372	22	99	'13-9	65.78	4.5	4.0	intron	CR44917 +	chr2L_22_21860001	chr2L_21860001	0.59	RAL-392
113	chr2L	22054384	22054431	Doc	5	37	14	47	'7-7	63.35	9.8	1.3	intergenic	CG34173 -	chr2L_14_22050001	chr2L_22050001	0.50	RAL-392
114	chr2L	22497724	22497806	copia	4870	250	12	82	'6-6	69.50	2.2	3.8	intergenic	not near genes	chr2L_12_22495001	chr2L_22495001	0.50	RAL-392
115	chr2L	22524626	22524655	1360	3370	3368	6	29	'3-3	66.35	5.5	0.9	intergenic	not near genes	chr2L_6_22520001	chr2L_22520001	0.50	RAL-392
116	chr2L	22927376	22927414	Doc	14	9	11	38	'7-4	59.28	34.0	0.3	intron	lt +	chr2L_11_22925001	chr2L_22925001	0.64	RAL-392
117	chr2L	23083032	23083141	HMS-Beagle	6800	7033	24	109	'18-6	64.94	8.5	2.5	intergenic	not near genes	chr2L_24_23080001	chr2L_23080001	0.75	RAL-392
118	chr2L	23180023	23180113	springer	7152	382	6	90	'1-5	64.39	4.7	1.1	intergenic	not near genes	chr2L_6_23180001	chr2L_23180001	0.17	RAL-392
119	chr2L	23295846	23295882	micropia	4998	6	10	36	'4-6	62.22	5.5	1.5	intergenic	not near genes	chr2L_10_23295001	chr2L_23295001	0.40	RAL-392
120	chr2L	23313648	23313763	S-element	1712	1707	8	115	'5-3	67.60	6.3	1.1	intergenic	CG40042 -	chr2L_8_23310001	chr2L_23310001	0.62	RAL-392
121	chr2R	498159	498275	blood	372	7011	23	116	'10-13	67.58	5.3	3.7	intron	CG40378 +	chr2R_23_495001	chr2R_495001	0.43	RAL-392
122	chr2R	544785	544870	HMS-Beagle	6808	236	18	85	'13-5	62.17	4.8	3.1	intron	CG40378 +	chr2R_18_540001	chr2R_540001	0.72	RAL-392
123	chr2R	1069763	1069810	F-element	13	25	11	47	'5-6	60.24	11.9	0.9	intergenic	not near genes	chr2R_11_1065001	chr2R_1065001	0.45	RAL-392
124	chr2R	1320676	1320706	diver2	358	4866	6	30	'3-3	57.12	11.1	0.5	intergenic	not near genes	chr2R_6_1320001	chr2R_1320001	0.50	RAL-392
125	chr2R	3032540	3032589	flea	4789	4756	16	49	'9-7	68.36	7.7	1.8	intergenic	not near genes	chr2R_16_3030001	chr2R_3030001	0.56	RAL-392
126	chr2R	3142019	3142051	17.6	490	7385	14	32	'8-6	66.45	7.3	1.7	intron	CG42596 +	chr2R_14_3140001	chr2R_3140001	0.57	RAL-392
127	chr2R	3158180	3158248	HMS-Beagle2	7182	6882	10	68	'2-8	69.83	1.9	3.4	intron	CG42596 +	chr2R_10_3155001	chr2R_3155001	0.20	RAL-392
128	chr2R	4350383	4350487	pogo	8	2090	15	104	'9-6	68.31	7.6	1.7	intron	Gprk1 -	chr2R_15_4350001	chr2R_4350001	0.60	RAL-392
129	chr2R	4377996	4378109	17.6	9	492	22	113	'9-13	68.68	6.1	3.1	intron	Gprk1 -	chr2R_22_4375001	chr2R_4375001	0.41	RAL-392
130	chr2R	4547510	4547552	Doc2-element	7	41	4	42	'3-1	66.84	9.6	0.4	intron	Stlk +	chr2R_4_4545001	chr2R_4545001	0.75	RAL-392
131	chr2R	5531169	5531203	1360	55	52	4	34	'1-3	64.40	6.7	0.5	intron	CG30438 +	chr2R_4_5530001	chr2R_5530001	0.25	RAL-392
132	chr2R	5674635	5674722	S-element	8	33	10	87	'5-5	66.36	7.1	1.2	intergenic	not near genes	chr2R_10_5670001	chr2R_5670001	0.50	RAL-392
133	chr2R	5771513	5771617	Tirant	8113	397	10	104	'2-8	66.69	5.5	1.5	intron	Gp210 +	chr2R_10_5770001	chr2R_5770001	0.20	RAL-392
134	chr2R	6113869	6113978	297	11	392	11	109	'5-6	66.23	4.0	2.2	intron	EcR -	chr2R_11_6110001	chr2R_6110001	0.45	RAL-392
135	chr2R	6438334	6438370	Stalker4	397	7317	4	36	'1-3	70.00	17.4	0.2	intergenic	not near genes	chr2R_4_6435001	chr2R_6435001	0.25	RAL-392
136	chr2R	6511292	6511383	roo	8673	410	16	91	'11-5	69.23	7.8	1.8	intron	jing +	chr2R_16_6510001	chr2R_6510001	0.69	RAL-392
137	chr2R	6570642	6570723	pogo	2089	3	13	81	'5-8	69.38	6.6	1.7	intron	jing +	chr2R_13_6570001	chr2R_6570001	0.38	RAL-392
138	chr2R	6595679	6595763	roo	409	22	5	84	'1-4	69.17	5.0	0.8	intron	jing +	chr2R_5_6595001	chr2R_6595001	0.20	RAL-392
139	chr2R	6785749	6785801	hobo	2923	18	11	52	'4-7	62.49	6.8	1.4	intron	Epac -	chr2R_11_6785001	chr2R_6785001	0.36	RAL-392
140	chr2R	6801683	6801717	McClintock	442	6422	11	34	'4-7	66.45	8.3	1.2	intergenic	not near genes	chr2R_11_6800001	chr2R_6800001	0.36	RAL-392
141	chr2R	7440665	7440769	P-element	2882	2878	13	104	'4-9	52.23	8.8	1.3	intergenic	CG11123 +	chr2R_13_7440001	chr2R_7440001	0.31	RAL-392
142	chr2R	7548983	7549097	blood	7388	6	33	114	'17-16	64.89	7.8	3.7	intron	Corin +	chr2R_33_7545001	chr2R_7545001	0.52	RAL-392
143	chr2R	7635560	7635602	jockey	4898	4890	13	42	'10-3	64.98	7.6	1.5	intron	CG43340 +	chr2R_13_7635001	chr2R_7635001	0.77	RAL-392
144	chr2R	7984104	7984213	blood	7011	375	13	109	'4-9	69.62	2.0	4.3	intron	ACC -	chr2R_13_7980001	chr2R_7980001	0.31	RAL-392
145	chr2R	8008606	8008704	1360	8	8	31	98	'16-15	67.83	5.5	4.8	intron	Odc2 +	chr2R_31_8005001	chr2R_8005001	0.52	RAL-392
146	chr2R	8086773	8086817	1360	9	3365	19	44	'8-11	66.85	9.4	1.8	3` UTR	sut1 +	chr2R_19_8085001	chr2R_8085001	0.42	RAL-392
147	chr2R	8143685	8143741	FB	13	47	5	56	'1-4	67.91	8.9	0.5	intron	Lpin -	chr2R_5_8140001	chr2R_8140001	0.20	RAL-392
148	chr2R	8184132	8184176	Juan	3	15	7	44	'5-2	64.31	9.4	0.7	intron	LRP1 +	chr2R_7_8180001	chr2R_8180001	0.71	RAL-392
149	chr2R	8190200	8190253	Doc	14	1	18	53	'14-4	62.43	7.2	2.2	intron	LRP1 +	chr2R_18_8190001	chr2R_8190001	0.78	RAL-392
150	chr2R	8272384	8272435	roo	9021	409	16	51	'6-10	67.80	5.1	2.6	intergenic	not near genes	chr2R_16_8270001	chr2R_8270001	0.38	RAL-392
151	chr2R	8310862	8310931	pogo	2082	6	15	69	'4-11	61.84	6.8	1.9	3` UTR	CR44449 -	chr2R_15_8310001	chr2R_8310001	0.27	RAL-392
152	chr2R	8603512	8603543	Doc	11	14	14	31	'8-6	66.01	13.7	1.0	intron	rgr +	chr2R_14_8600001	chr2R_8600001	0.57	RAL-392
153	chr2R	9378818	9378921	roo	406	8679	22	103	'7-15	64.35	7.5	2.6	intron	CG13954 -	chr2R_22_9375001	chr2R_9375001	0.32	RAL-392
154	chr2R	9556724	9556800	297	11	392	22	76	'9-13	69.10	6.3	3.0	intergenic	not near genes	chr2R_22_9555001	chr2R_9555001	0.41	RAL-392
155	chr2R	9633079	9633190	mdg1	2	419	19	111	'17-2	64.19	5.0	3.2	intron	Mmp2 -	chr2R_19_9630001	chr2R_9630001	0.89	RAL-392
156	chr2R	9870959	9871040	roo	8669	396	14	81	'3-11	64.95	8.8	1.4	intron	cbx -	chr2R_14_9870001	chr2R_9870001	0.21	RAL-392
157	chr2R	9950676	9950795	S-element	3	1714	23	119	'10-13	68.79	5.4	3.6	intron	Mef2 -	chr2R_23_9950001	chr2R_9950001	0.43	RAL-392
158	chr2R	10053752	10053803	jockey	4761	4802	15	51	'6-9	63.18	9.2	1.5	intron	magu +	chr2R_15_10050001	chr2R_10050001	0.40	RAL-392
159	chr2R	10139790	10139834	412	7096	4	13	44	'9-4	62.99	9.4	1.2	3` UTR,exon	CR43467 -,Or46a +	chr2R_13_10135001	chr2R_10135001	0.69	RAL-392
160	chr2R	10238108	10238168	Tirant	388	8109	4	60	'2-2	69.45	5.7	0.6	3` UTR,5` UTR	CR45265 -,Hdc +	chr2R_4_10235001	chr2R_10235001	0.50	RAL-392
161	chr2R	10604979	10605036	Tirant	381	403	8	57	'6-2	68.96	8.6	0.8	intron	psq +	chr2R_8_10600001	chr2R_10600001	0.75	RAL-392
162	chr2R	10892948	10892986	opus	499	474	14	38	'4-10	64.51	12.1	1.1	3` UTR	CG30020 +	chr2R_14_10890001	chr2R_10890001	0.29	RAL-392
163	chr2R	11128943	11129025	hobo	7	2920	13	82	'9-4	62.95	7.2	1.6	intergenic	not near genes	chr2R_13_11125001	chr2R_11125001	0.69	RAL-392
164	chr2R	11192901	11192981	17.6	7400	2	11	80	'6-5	69.87	3.7	2.3	intron	shn +	chr2R_11_11190001	chr2R_11190001	0.55	RAL-392
165	chr2R	11218758	11218854	1360	3385	12	21	96	'12-9	67.86	7.7	2.4	intron	CG9084 -	chr2R_21_11215001	chr2R_11215001	0.57	RAL-392
166	chr2R	11218761	11218843	Tc3	238	315	4	82	'2-2	73.38	8.0	0.4	intron	CG9084 -	chr2R_4_11215001	chr2R_11215001	0.50	RAL-392
167	chr2R	11575153	11575193	INE-1	133	135	4	40	'1-3	67.51	7.2	0.5	intergenic	not near genes	chr2R_4_11575001	chr2R_11575001	0.25	RAL-392
168	chr2R	11631419	11631506	roo	15	9052	13	87	'7-6	61.31	8.3	1.4	intron	CG9005 -	chr2R_13_11630001	chr2R_11630001	0.54	RAL-392
169	chr2R	11763906	11763992	copia	246	25	18	86	'9-9	65.44	5.1	3.0	intron	ths +	chr2R_18_11760001	chr2R_11760001	0.50	RAL-392
170	chr2R	11829083	11829175	Juan	4203	3	16	92	'10-6	64.92	4.6	2.9	exon	Sobp -	chr2R_16_11825001	chr2R_11825001	0.62	RAL-392
171	chr2R	11951797	11951895	pogo	19	2097	18	98	'9-9	68.49	5.3	2.9	intron	CG13188 +	chr2R_18_11950001	chr2R_11950001	0.50	RAL-392
172	chr2R	12045729	12045804	Bari1	1677	5	6	75	'3-3	66.94	3.5	1.3	intron	Drep-1 +	chr2R_6_12045001	chr2R_12045001	0.50	RAL-392
173	chr2R	12185347	12185421	accord	7376	7	9	74	'4-5	64.55	13.7	0.6	3` UTR,3` UTR	CG13175 +,CG33964 +	chr2R_9_12185001	chr2R_12185001	0.44	RAL-392
174	chr2R	12336628	12336672	pogo	45	4	12	44	'8-4	67.59	9.6	1.1	intergenic	CG34021 +,CG8490 +	chr2R_12_12335001	chr2R_12335001	0.67	RAL-392
175	chr2R	12369654	12369697	I-element	5344	5337	10	43	'5-5	65.50	12.1	0.8	exon	CG33012 +	chr2R_10_12365001	chr2R_12365001	0.50	RAL-392
176	chr2R	12650224	12650320	Transpac	4927	299	31	96	'19-12	64.79	5.1	5.1	intergenic	not near genes	chr2R_31_12650001	chr2R_12650001	0.61	RAL-392
177	chr2R	13010513	13010623	1360	3382	2	31	110	'12-19	68.13	9.4	3.0	intergenic	not near genes	chr2R_31_13010001	chr2R_13010001	0.39	RAL-392
178	chr2R	13242354	13242468	opus	499	5	7	114	'2-5	67.26	6.2	1.0	intergenic	not near genes	chr2R_7_13240001	chr2R_13240001	0.29	RAL-392
179	chr2R	13658978	13659056	roo	8664	402	21	78	'6-15	64.71	4.7	3.7	intron	fas +	chr2R_21_13655001	chr2R_13655001	0.29	RAL-392
180	chr2R	13738113	13738166	jockey	4758	4761	11	53	'1-10	61.63	8.8	1.1	intron	fas +	chr2R_11_13735001	chr2R_13735001	0.09	RAL-392
181	chr2R	14123425	14123532	412	5	7537	34	107	'23-11	66.56	8.3	3.7	intron	Prosap -	chr2R_34_14120001	chr2R_14120001	0.68	RAL-392
182	chr2R	14246970	14247071	297	374	6582	9	101	'3-6	68.18	5.2	1.5	5` UTR	Mdr50 +	chr2R_9_14245001	chr2R_14245001	0.33	RAL-392
183	chr2R	14578504	14578619	copia	248	4868	34	115	'13-21	67.99	7.6	4.0	intron	ttv +	chr2R_34_14575001	chr2R_14575001	0.38	RAL-392
184	chr2R	14581442	14581561	opus	112	7495	8	119	'1-7	66.25	4.8	1.4	intron	ttv +	chr2R_8_14580001	chr2R_14580001	0.12	RAL-392
185	chr2R	14661327	14661378	412	481	7075	9	51	'4-5	64.62	4.1	1.8	intergenic	not near genes	chr2R_9_14660001	chr2R_14660001	0.44	RAL-392
186	chr2R	14942041	14942137	jockey	19	4983	12	96	'6-6	66.35	11.2	1.0	intergenic	CG10257 +	chr2R_12_14940001	chr2R_14940001	0.50	RAL-392
187	chr2R	15285412	15285521	roo	408	11	25	109	'18-7	68.63	7.1	3.1	intron	Trpm -	chr2R_25_15285001	chr2R_15285001	0.72	RAL-392
188	chr2R	15288625	15288739	Transpac	5227	4925	27	114	'8-19	61.38	6.9	3.4	intron	Trpm -	chr2R_27_15285001	chr2R_15285001	0.30	RAL-392
189	chr2R	15474455	15474576	roo	8662	406	13	121	'8-5	69.81	9.0	1.3	intron	CG8180 -	chr2R_13_15470001	chr2R_15470001	0.62	RAL-392
190	chr2R	15600430	15600466	hobo	17	3	8	36	'6-2	64.00	2.3	2.4	intergenic	not near genes	chr2R_8_15600001	chr2R_15600001	0.75	RAL-392
191	chr2R	15728221	15728318	hobo	2924	2	13	97	'4-9	64.49	5.1	2.1	intron	CG30089 +	chr2R_13_15725001	chr2R_15725001	0.31	RAL-392
192	chr2R	16033255	16033351	pogo	17	2092	27	96	'20-7	69.66	4.2	5.2	intron	SP2353 +	chr2R_27_16030001	chr2R_16030001	0.74	RAL-392
193	chr2R	16150150	16150239	P-element	10	2881	13	89	'8-5	55.78	8.1	1.4	5` UTR	lbk +	chr2R_13_16150001	chr2R_16150001	0.62	RAL-392
194	chr2R	16834235	16834331	1360	3379	3378	23	96	'17-6	65.26	6.7	3.0	5` UTR	CR43650 +	chr2R_23_16830001	chr2R_16830001	0.74	RAL-392
195	chr2R	17340048	17340160	hobo	2937	4	20	112	'2-18	63.96	4.9	3.4	intron	mbl +	chr2R_20_17340001	chr2R_17340001	0.10	RAL-392
196	chr2R	17442369	17442463	diver	208	5891	11	94	'8-3	66.66	5.5	1.7	intron,3` UTR	EDTP -,CG18467 +	chr2R_11_17440001	chr2R_17440001	0.73	RAL-392
197	chr2R	17900157	17900193	Juan	4203	4167	11	36	'8-3	64.06	2.3	3.3	intron	Elk +	chr2R_11_17900001	chr2R_17900001	0.73	RAL-392
198	chr2R	17986250	17986362	297	392	6585	20	112	'11-9	68.29	6.2	2.8	intron	dpr13 -	chr2R_20_17985001	chr2R_17985001	0.55	RAL-392
199	chr2R	18399091	18399129	copia	4877	47	20	38	'13-7	61.14	3.7	4.3	exon	GstE1 +	chr2R_20_18395001	chr2R_18395001	0.65	RAL-392
200	chr2R	18586901	18586932	I-element	5327	5347	5	31	'4-1	65.84	8.1	0.5	intron	GEFmeso -	chr2R_5_18585001	chr2R_18585001	0.80	RAL-392
201	chr2R	18650992	18651104	Bari1	1700	1	15	112	'5-10	64.51	9.3	1.5	intron	SP2637 -	chr2R_15_18650001	chr2R_18650001	0.33	RAL-392
202	chr2R	18807872	18807906	BS	5069	5078	13	34	'7-6	66.98	3.3	3.0	intergenic	CG15096 -	chr2R_13_18805001	chr2R_18805001	0.54	RAL-392
203	chr2R	19078026	19078068	roo	8697	2	6	42	'5-1	67.96	3.8	1.2	intron	5-HT1A +	chr2R_6_19075001	chr2R_19075001	0.83	RAL-392
204	chr2R	19162865	19162956	diver	223	463	22	91	'17-5	64.39	3.2	5.2	3` UTR	ena +	chr2R_22_19160001	chr2R_19160001	0.77	RAL-392
205	chr2R	20972036	20972078	412	7093	5	10	42	'5-5	62.27	5.3	1.6	intergenic	not near genes	chr2R_10_20970001	chr2R_20970001	0.50	RAL-392
206	chr2R	21196714	21196828	Transpac	311	4928	29	114	'11-18	64.03	9.2	2.8	intron	Lapsyn +	chr2R_29_21195001	chr2R_21195001	0.38	RAL-392
207	chr2R	21474246	21474326	Tirant	8500	8491	13	80	'11-2	70.05	7.4	1.5	intron	Sdc -	chr2R_13_21470001	chr2R_21470001	0.85	RAL-392
208	chr2R	21779144	21779185	412	7097	9	17	41	'10-7	67.58	2.1	5.5	intergenic	not near genes	chr2R_17_21775001	chr2R_21775001	0.59	RAL-392
209	chr2R	21912545	21912638	roo	8685	402	17	93	'2-15	66.32	5.9	2.5	intron	Fili +	chr2R_17_21910001	chr2R_21910001	0.12	RAL-392
210	chr2R	22811010	22811048	I-element	5310	5342	6	38	'5-1	70.65	2.5	1.7	intron	stl +	chr2R_6_22810001	chr2R_22810001	0.83	RAL-392
211	chr2R	22859580	22859673	hobo	2930	15	6	93	'2-4	62.44	3.9	1.2	intergenic	not near genes	chr2R_6_22855001	chr2R_22855001	0.33	RAL-392
212	chr2R	23112073	23112165	hobo	2917	3	11	92	'1-10	63.00	7.4	1.3	intergenic	not near genes	chr2R_11_23110001	chr2R_23110001	0.09	RAL-392
213	chr2R	23258577	23258669	hobo	2710	27	9	92	'4-5	63.31	2.8	2.4	intergenic	not near genes	chr2R_9_23255001	chr2R_23255001	0.44	RAL-392
214	chr2R	23395944	23396025	hobo	16	2710	20	81	'15-5	67.75	5.3	3.2	intron	CG3530 -	chr2R_20_23395001	chr2R_23395001	0.75	RAL-392
215	chr2R	23442627	23442723	hobo	2931	4	15	96	'5-10	69.85	1.8	5.4	intergenic	not near genes	chr2R_15_23440001	chr2R_23440001	0.33	RAL-392
216	chr2R	23762146	23762263	roo	406	8663	39	117	'11-28	67.00	3.8	8.1	intron	CG9850 -	chr2R_39_23760001	chr2R_23760001	0.28	RAL-392
217	chr2R	24197266	24197291	412	7078	44	6	25	'3-3	57.96	14.6	0.4	intergenic	cN-IIIB +	chr2R_6_24195001	chr2R_24195001	0.50	RAL-392
218	chr2R	24520080	24520169	mdg1	7068	7457	20	89	'3-17	64.76	5.9	2.9	exon	Ir60d +	chr2R_20_24520001	chr2R_24520001	0.15	RAL-392
219	chr2R	24825866	24825953	I-element	5343	4	7	87	'3-4	68.16	5.2	1.1	intron	Dll +	chr2R_7_24825001	chr2R_24825001	0.43	RAL-392
220	chr3L	254629	254657	F-element	22	25	4	28	'3-1	62.34	18.6	0.2	exon	DIP2 -	chr3L_4_250001	chr3L_250001	0.75	RAL-392
221	chr3L	340830	340912	roo	23	408	16	82	'10-6	62.10	5.6	2.4	intron,intron	Ptpmeg +,mthl10 -	chr3L_16_340001	chr3L_340001	0.62	RAL-392
222	chr3L	425381	425423	I-element	5304	5346	13	42	'3-10	60.44	7.3	1.6	intergenic	not near genes	chr3L_13_425001	chr3L_425001	0.23	RAL-392
223	chr3L	554676	554788	copia	254	7	26	112	'13-13	64.15	5.6	3.9	intron	hipk +	chr3L_26_550001	chr3L_550001	0.50	RAL-392
224	chr3L	1065984	1066075	roo	5	395	15	91	'8-7	67.23	1.3	6.5	intron	bab1 -	chr3L_15_1065001	chr3L_1065001	0.53	RAL-392
225	chr3L	1696416	1696507	Juan	3	4205	13	91	'8-5	62.44	8.7	1.3	intron	CG7991 +	chr3L_13_1695001	chr3L_1695001	0.62	RAL-392
226	chr3L	2119751	2119833	mdg3	5251	5484	19	82	'11-8	67.01	5.4	3.0	intron	zormin -	chr3L_19_2115001	chr3L_2115001	0.58	RAL-392
227	chr3L	2190243	2190279	412	7527	7542	9	36	'6-3	63.67	5.2	1.5	exon	CG5707 -	chr3L_9_2190001	chr3L_2190001	0.67	RAL-392
228	chr3L	2217201	2217304	roo	401	8673	36	103	'17-19	65.05	5.6	5.5	intergenic	not near genes	chr3L_36_2215001	chr3L_2215001	0.47	RAL-392
229	chr3L	2417359	2417443	P-element	2871	2877	18	84	'10-8	50.72	7.5	2.1	intron	CG45186 +	chr3L_18_2415001	chr3L_2415001	0.56	RAL-392
230	chr3L	2426095	2426201	roo	8683	409	12	106	'3-9	65.08	4.6	2.1	intron	CG45186 +	chr3L_12_2425001	chr3L_2425001	0.25	RAL-392
231	chr3L	2707630	2707749	Stalker2	4	404	23	119	'14-9	64.74	4.3	4.3	intron	Fife -	chr3L_23_2705001	chr3L_2705001	0.61	RAL-392
232	chr3L	2714417	2714452	BS	5048	5080	9	35	'3-6	59.09	2.9	2.3	intergenic	not near genes	chr3L_9_2710001	chr3L_2710001	0.33	RAL-392
233	chr3L	2823088	2823139	jockey	4759	4800	17	51	'8-9	63.06	3.1	4.1	intron	CG43444 -	chr3L_17_2820001	chr3L_2820001	0.47	RAL-392
234	chr3L	3476134	3476246	Quasimodo	3	7360	16	112	'9-7	67.10	6.1	2.3	intron	CG42324 +	chr3L_16_3475001	chr3L_3475001	0.56	RAL-392
235	chr3L	3487260	3487356	blood	7014	376	20	96	'19-1	65.41	3.2	4.8	intron	CG42324 +	chr3L_20_3485001	chr3L_3485001	0.95	RAL-392
236	chr3L	3537871	3537974	roo	403	8676	15	103	'7-8	63.04	4.2	2.9	intron	Eip63E +	chr3L_15_3535001	chr3L_3535001	0.47	RAL-392
237	chr3L	4002116	4002152	jockey	13	25	8	36	'4-4	64.11	10.6	0.7	intergenic	not near genes	chr3L_8_4000001	chr3L_4000001	0.50	RAL-392
238	chr3L	5012207	5012314	copia	245	4872	19	107	'8-11	66.44	8.9	1.9	intron	Con -	chr3L_19_5010001	chr3L_5010001	0.42	RAL-392
239	chr3L	5062768	5062866	hobo	2	2929	11	98	'8-3	65.64	4.1	2.2	intron	Con -	chr3L_11_5060001	chr3L_5060001	0.73	RAL-392
240	chr3L	5249465	5249563	1360	16	5	34	98	'17-17	66.59	5.7	5.1	intron	shep -	chr3L_34_5245001	chr3L_5245001	0.50	RAL-392
241	chr3L	6511412	6511512	blood	3	379	24	100	'14-10	62.77	6.3	3.3	intron	sfl +	chr3L_24_6510001	chr3L_6510001	0.58	RAL-392
242	chr3L	6678473	6678579	mdg3	242	5253	27	106	'5-22	67.51	2.7	7.3	intergenic	not near genes	chr3L_27_6675001	chr3L_6675001	0.19	RAL-392
243	chr3L	6692275	6692391	pogo	7	2100	24	116	'12-12	64.43	5.6	3.6	exon	SP1173 -	chr3L_24_6690001	chr3L_6690001	0.50	RAL-392
244	chr3L	6837526	6837584	412	22	7542	13	58	'10-3	61.97	3.5	2.9	intergenic	not near genes	chr3L_13_6835001	chr3L_6835001	0.77	RAL-392
245	chr3L	7002276	7002385	roo	404	7	31	109	'17-14	66.43	8.6	3.2	intron	Mp +	chr3L_31_7000001	chr3L_7000001	0.55	RAL-392
246	chr3L	7432533	7432570	jockey	4807	4770	9	37	'6-3	61.04	7.3	1.1	intron	CG42458 +	chr3L_9_7430001	chr3L_7430001	0.67	RAL-392
247	chr3L	7711147	7711234	Bari1	1704	31	19	87	'12-7	67.28	5.2	3.1	intron,intron	CG32373 +,Ank2 -	chr3L_19_7710001	chr3L_7710001	0.63	RAL-392
248	chr3L	7743659	7743776	roo	1	406	35	117	'23-12	66.07	7.1	4.3	intron	CG32373 +	chr3L_35_7740001	chr3L_7740001	0.66	RAL-392
249	chr3L	7757167	7757197	roo	8668	8698	12	30	'7-5	65.16	18.6	0.6	exon	CG32373 +	chr3L_12_7755001	chr3L_7755001	0.58	RAL-392
250	chr3L	7884422	7884540	Bari1	1	1703	42	118	'19-23	66.01	8.4	4.5	intron	CG32365 +	chr3L_42_7880001	chr3L_7880001	0.45	RAL-392
251	chr3L	7895982	7896091	hobo	2936	1	13	109	'4-9	68.02	6.2	1.8	3` UTR	eIF4E-5 +	chr3L_13_7895001	chr3L_7895001	0.31	RAL-392
252	chr3L	8395219	8395300	pogo	4	2079	10	81	'8-2	69.15	9.1	1.0	intergenic	not near genes	chr3L_10_8395001	chr3L_8395001	0.80	RAL-392
253	chr3L	8679540	8679642	Bari1	21	1705	4	102	'1-3	64.21	7.3	0.5	intergenic	h +	chr3L_4_8675001	chr3L_8675001	0.25	RAL-392
254	chr3L	9423094	9423177	P-element	2	2866	6	83	'3-3	55.11	7.3	0.7	intron	CG3967 -	chr3L_6_9420001	chr3L_9420001	0.50	RAL-392
255	chr3L	9763308	9763416	pogo	1	2086	19	108	'13-6	67.92	7.7	2.2	intergenic	CG8177 +	chr3L_19_9760001	chr3L_9760001	0.68	RAL-392
256	chr3L	10037736	10037819	pogo	2073	2	22	83	'4-18	69.19	5.9	3.2	intron	dpr6 +	chr3L_22_10035001	chr3L_10035001	0.18	RAL-392
257	chr3L	10165802	10165834	Doc	15	14	5	32	'1-4	66.22	1.7	1.9	intron	dpr10 -	chr3L_5_10165001	chr3L_10165001	0.20	RAL-392
258	chr3L	10611606	10611731	roo	8702	400	5	125	'4-1	64.50	1.2	2.3	intergenic	not near genes	chr3L_5_10610001	chr3L_10610001	0.80	RAL-392
259	chr3L	10670600	10670719	pogo	3	2100	21	119	'11-10	67.41	8.3	2.3	intron	simj +	chr3L_21_10670001	chr3L_10670001	0.52	RAL-392
260	chr3L	10720467	10720530	roo	8694	408	10	63	'5-5	65.70	8.0	1.1	intergenic	not near genes	chr3L_10_10720001	chr3L_10720001	0.50	RAL-392
261	chr3L	10923042	10923147	Burdock	6389	5	26	105	'14-12	63.88	6.1	3.7	intergenic	not near genes	chr3L_26_10920001	chr3L_10920001	0.54	RAL-392
262	chr3L	11187834	11187935	jockey	36	4988	22	101	'3-19	62.33	8.7	2.3	intron	GlcAT-P -	chr3L_22_11185001	chr3L_11185001	0.14	RAL-392
263	chr3L	11283725	11283839	pogo	2098	7	10	114	'4-6	67.62	8.0	1.1	intergenic	not near genes	chr3L_10_11280001	chr3L_11280001	0.40	RAL-392
264	chr3L	11360201	11360226	rover	7294	342	7	25	'3-4	60.88	7.1	0.9	intergenic	not near genes	chr3L_7_11360001	chr3L_11360001	0.43	RAL-392
265	chr3L	11596145	11596212	Juan	4196	23	8	67	'3-5	57.93	7.2	1.0	intergenic	not near genes	chr3L_8_11595001	chr3L_11595001	0.38	RAL-392
266	chr3L	12300118	12300149	1360	23	36	14	31	'7-7	65.52	4.2	2.7	intergenic	not near genes	chr3L_14_12300001	chr3L_12300001	0.50	RAL-392
267	chr3L	12300855	12300965	mdg1	419	7047	23	110	'10-13	64.83	6.6	3.0	intergenic	CR44550 +	chr3L_23_12300001	chr3L_12300001	0.43	RAL-392
268	chr3L	12628806	12628847	Juan	4206	4165	12	41	'4-8	64.96	10.4	1.1	intron	CR32111 +	chr3L_12_12625001	chr3L_12625001	0.33	RAL-392
269	chr3L	12721301	12721409	pogo	2092	2	29	108	'11-18	69.90	8.3	3.1	intergenic	not near genes	chr3L_29_12720001	chr3L_12720001	0.38	RAL-392
270	chr3L	12873827	12873913	roo	397	8686	13	86	'11-2	63.47	7.5	1.5	intergenic	not near genes	chr3L_13_12870001	chr3L_12870001	0.85	RAL-392
271	chr3L	12952098	12952135	Juan	4172	4209	5	37	'3-2	65.68	1.6	1.9	intergenic	not near genes	chr3L_5_12950001	chr3L_12950001	0.60	RAL-392
272	chr3L	13410809	13410899	blood	7382	1	30	90	'11-19	64.53	6.7	3.9	intergenic	CG10222 -	chr3L_30_13410001	chr3L_13410001	0.37	RAL-392
273	chr3L	13688714	13688758	Stalker	6852	47	7	44	'2-5	68.42	5.1	1.1	intron	bru-3 -	chr3L_7_13685001	chr3L_13685001	0.29	RAL-392
274	chr3L	13688722	13688827	Stalker4	4	405	25	105	'6-19	62.10	4.0	5.0	intron	bru-3 -	chr3L_25_13685001	chr3L_13685001	0.24	RAL-392
275	chr3L	13851119	13851215	roo	390	8664	12	96	'7-5	72.99	4.3	2.3	exon	Hml +	chr3L_12_13850001	chr3L_13850001	0.58	RAL-392
276	chr3L	13912691	13912807	297	6583	6972	21	116	'7-14	69.75	9.0	2.1	intron	Rgl -	chr3L_21_13910001	chr3L_13910001	0.33	RAL-392
277	chr3L	14049963	14050078	pogo	8	2099	23	115	'18-5	59.04	7.4	2.7	intergenic	blue -	chr3L_23_14045001	chr3L_14045001	0.78	RAL-392
278	chr3L	14585794	14585941	Tc1	110	135	20	147	'11-9	54.38	1.8	7.1	intron	HGTX -	chr3L_20_14585001	chr3L_14585001	0.55	RAL-392
279	chr3L	14689115	14689209	mdg1	7449	7054	31	94	'23-8	63.61	7.8	3.5	intron	ome +	chr3L_31_14685001	chr3L_14685001	0.74	RAL-392
280	chr3L	14694825	14694928	hobo	5	2935	16	103	'11-5	69.23	6.5	2.1	intron	ome +	chr3L_16_14690001	chr3L_14690001	0.69	RAL-392
281	chr3L	14822843	14822923	mdg1	7434	7053	8	80	'6-2	62.08	5.5	1.2	intron	CG17839 +	chr3L_8_14820001	chr3L_14820001	0.75	RAL-392
282	chr3L	15099560	15099641	G4	3813	3804	10	81	'4-6	48.56	5.7	1.5	intron	CTPsyn +	chr3L_10_15095001	chr3L_15095001	0.40	RAL-392
283	chr3L	15608210	15608323	pogo	2100	10	16	113	'8-8	64.59	7.7	1.8	3` UTR	RhoGAP71E +	chr3L_16_15605001	chr3L_15605001	0.50	RAL-392
284	chr3L	15681513	15681616	pogo	11	2084	30	103	'17-13	64.12	9.8	2.8	intergenic	CG7304 +,CG7579 -	chr3L_30_15680001	chr3L_15680001	0.57	RAL-392
285	chr3L	16137308	16137370	Juan	4023	4197	13	62	'3-10	64.90	6.3	1.8	5` UTR	CG5157 -	chr3L_13_16135001	chr3L_16135001	0.23	RAL-392
286	chr3L	16710680	16710769	P-element	7	2878	5	89	'3-2	60.87	5.4	0.8	intron,intron	Lasp -,CG43954 -	chr3L_5_16710001	chr3L_16710001	0.60	RAL-392
287	chr3L	16727937	16728049	roo	8670	406	14	112	'11-3	66.30	9.6	1.3	exon	PGRP-SB1 -	chr3L_14_16725001	chr3L_16725001	0.79	RAL-392
288	chr3L	16973346	16973461	S-element	185	1704	6	115	'4-2	70.88	11.8	0.5	intron	Exn +	chr3L_6_16970001	chr3L_16970001	0.67	RAL-392
289	chr3L	17442171	17442226	hopper	18	1399	6	55	'1-5	57.21	4.6	1.1	intron	CG18265 +	chr3L_6_17440001	chr3L_17440001	0.17	RAL-392
290	chr3L	17946839	17946935	roo	9053	4	14	96	'9-5	68.88	7.5	1.6	intergenic	CR45393 -	chr3L_14_17945001	chr3L_17945001	0.64	RAL-392
291	chr3L	18028041	18028079	jockey	4764	4802	9	38	'6-3	66.88	13.1	0.6	intron	Eip75B -	chr3L_9_18025001	chr3L_18025001	0.67	RAL-392
292	chr3L	18122278	18122394	invader1	4010	4	13	116	'10-3	58.91	6.4	1.8	intergenic	CG42853 -	chr3L_13_18120001	chr3L_18120001	0.77	RAL-392
293	chr3L	18125176	18125275	roo	9062	8678	15	99	'6-9	63.25	7.0	1.9	intergenic	not near genes	chr3L_15_18125001	chr3L_18125001	0.40	RAL-392
294	chr3L	18312532	18312645	mdg1	417	7042	20	113	'14-6	62.68	6.4	2.7	intergenic	not near genes	chr3L_20_18310001	chr3L_18310001	0.70	RAL-392
295	chr3L	18392128	18392173	BS	5089	5049	4	45	'1-3	67.29	4.5	0.7	intergenic	not near genes	chr3L_4_18390001	chr3L_18390001	0.25	RAL-392
296	chr3L	18735174	18735291	flea	4753	257	21	117	'10-11	68.16	7.7	2.4	intergenic	not near genes	chr3L_21_18735001	chr3L_18735001	0.48	RAL-392
297	chr3L	18959930	18959963	BS	4993	5011	7	33	'3-4	62.25	13.2	0.5	intergenic	not near genes	chr3L_7_18955001	chr3L_18955001	0.43	RAL-392
298	chr3L	19153071	19153196	HMS-Beagle	6794	247	19	125	'12-7	69.82	8.2	2.1	intron	fz2 -	chr3L_19_19150001	chr3L_19150001	0.63	RAL-392
299	chr3L	19274805	19274884	transib2	3	2808	6	79	'5-1	62.08	9.5	0.6	intergenic	not near genes	chr3L_6_19270001	chr3L_19270001	0.83	RAL-392
300	chr3L	19339398	19339442	Tc1	53	7	5	44	'3-2	64.16	7.7	0.6	intergenic	not near genes	chr3L_5_19335001	chr3L_19335001	0.60	RAL-392
301	chr3L	19349923	19350016	1360	2	3203	8	93	'7-1	66.97	8.7	0.8	intron	CG32206 -	chr3L_8_19345001	chr3L_19345001	0.88	RAL-392
302	chr3L	19413439	19413541	17.6	6942	487	12	102	'5-7	67.63	6.1	1.7	intergenic	not near genes	chr3L_12_19410001	chr3L_19410001	0.42	RAL-392
303	chr3L	19482945	19483053	Quasimodo	7358	6	6	108	'3-3	70.19	5.7	0.9	intergenic	not near genes	chr3L_6_19480001	chr3L_19480001	0.50	RAL-392
304	chr3L	19497974	19498077	roo	8680	9069	17	103	'9-8	64.81	7.8	1.9	intergenic	CG9451 -,CG9449 -	chr3L_17_19495001	chr3L_19495001	0.53	RAL-392
305	chr3L	20187372	20187424	FB	476	927	9	52	'3-6	70.06	22.8	0.4	intron	CG42674 -	chr3L_9_20185001	chr3L_20185001	0.33	RAL-392
306	chr3L	20224131	20224229	Chimpo	180	16	8	98	'7-1	64.88	9.4	0.8	intron	CG17147 +	chr3L_8_20220001	chr3L_20220001	0.88	RAL-392
307	chr3L	20272027	20272116	pogo	2079	13	10	89	'4-6	68.24	6.4	1.4	intron	gogo -	chr3L_10_20270001	chr3L_20270001	0.40	RAL-392
308	chr3L	20361675	20361769	pogo	2093	20	13	94	'6-7	64.41	7.3	1.6	intergenic	DNApol-alpha60 -,Toll-9 -	chr3L_13_20360001	chr3L_20360001	0.46	RAL-392
309	chr3L	20454450	20454555	1360	7	10	16	105	'8-8	70.46	9.8	1.5	5` UTR	Uhg8 +	chr3L_16_20450001	chr3L_20450001	0.50	RAL-392
310	chr3L	20623707	20623777	roo	10	9037	10	70	'8-2	67.50	8.0	1.1	intergenic	CR44684 -	chr3L_10_20620001	chr3L_20620001	0.80	RAL-392
311	chr3L	20821087	20821148	roo	399	8701	5	61	'3-2	67.54	13.6	0.3	intron	Pka-R1 +	chr3L_5_20820001	chr3L_20820001	0.60	RAL-392
312	chr3L	20952159	20952264	roo	409	16	13	105	'8-5	65.81	7.7	1.5	intergenic	not near genes	chr3L_13_20950001	chr3L_20950001	0.62	RAL-392
313	chr3L	21035588	21035666	FB	31	3	6	78	'3-3	67.97	6.6	0.8	intron	siz +	chr3L_6_21035001	chr3L_21035001	0.50	RAL-392
314	chr3L	21145700	21145725	INE-1	567	563	6	25	'2-4	59.15	9.1	0.6	intron	Ac78C -	chr3L_6_21145001	chr3L_21145001	0.33	RAL-392
315	chr3L	21169456	21169545	roo	8690	402	7	89	'3-4	63.04	14.1	0.5	intron	Ac78C -	chr3L_7_21165001	chr3L_21165001	0.43	RAL-392
316	chr3L	21582757	21582829	roo	400	5	6	72	'2-4	64.17	5.6	0.9	intergenic	not near genes	chr3L_6_21580001	chr3L_21580001	0.33	RAL-392
317	chr3L	21821786	21821872	1360	3367	4	18	86	'7-11	68.76	8.7	1.9	intergenic	CycH +	chr3L_18_21820001	chr3L_21820001	0.39	RAL-392
318	chr3L	22098249	22098362	mdg1	1	421	13	113	'4-9	64.94	8.0	1.4	intergenic	not near genes	chr3L_13_22095001	chr3L_22095001	0.31	RAL-392
319	chr3L	22500126	22500218	copia	1	251	12	92	'6-6	68.25	4.0	2.4	intergenic	not near genes	chr3L_12_22500001	chr3L_22500001	0.50	RAL-392
320	chr3L	22635686	22635775	hopper	13	1406	8	89	'3-5	63.66	4.6	1.4	intron	CG14459 -	chr3L_8_22635001	chr3L_22635001	0.38	RAL-392
321	chr3L	22987103	22987147	S-element	1675	85	7	44	'3-4	69.22	9.9	0.6	intergenic	not near genes	chr3L_7_22985001	chr3L_22985001	0.43	RAL-392
322	chr3L	23015678	23015789	flea	249	4761	15	111	'8-7	67.95	8.1	1.6	intron	nrm +	chr3L_15_23015001	chr3L_23015001	0.53	RAL-392
323	chr3L	23219230	23219327	1360	3383	1	15	97	'11-4	66.82	8.1	1.6	intron	nAChRalpha4 +	chr3L_15_23215001	chr3L_23215001	0.73	RAL-392
324	chr3L	23233613	23233853	S2	291	58	6	240	'5-1	64.63	4.6	1.1	intron	nAChRalpha4 +	chr3L_6_23230001	chr3L_23230001	0.83	RAL-392
325	chr3L	23282729	23282783	Juan	4203	42	10	54	'5-5	64.77	11.4	0.8	intron	nAChRalpha4 +	chr3L_10_23280001	chr3L_23280001	0.50	RAL-392
326	chr3L	23354614	23354644	gypsy2	6496	6518	7	30	'3-4	59.41	11.5	0.6	intergenic	not near genes	chr3L_7_23350001	chr3L_23350001	0.43	RAL-392
327	chr3L	24153190	24153270	Tabor	7297	13	13	80	'5-8	62.49	7.2	1.6	intron	Snap25 +	chr3L_13_24150001	chr3L_24150001	0.38	RAL-392
328	chr3L	25272525	25272573	1360	9	82	13	48	'8-5	67.54	3.7	2.8	intron	CG40467 -	chr3L_13_25270001	chr3L_25270001	0.62	RAL-392
329	chr3L	25337325	25337421	Transpac	4921	5221	15	96	'7-8	65.85	6.1	2.1	intergenic	not near genes	chr3L_15_25335001	chr3L_25335001	0.47	RAL-392
330	chr3L	25484295	25484374	copia	8	226	14	79	'9-5	64.29	11.4	1.1	intron	CG41343 -	chr3L_14_25480001	chr3L_25480001	0.64	RAL-392
331	chr3L	26719133	26719162	Tc1-2	3	32	5	29	'3-2	59.47	9.5	0.5	intergenic	not near genes	chr3L_5_26715001	chr3L_26715001	0.60	RAL-392
332	chr3L	27091916	27092008	pogo	2078	8	6	92	'3-3	61.20	5.9	0.9	3` UTR	CR45177 -	chr3L_6_27090001	chr3L_27090001	0.50	RAL-392
333	chr3L	27174932	27175003	pogo	2057	13	6	71	'1-5	67.06	10.9	0.5	intergenic	not near genes	chr3L_6_27170001	chr3L_27170001	0.17	RAL-392
334	chr3L	27356078	27356106	Tc3	1700	1667	5	28	'3-2	73.72	11.2	0.4	intron	Dbp80 +	chr3L_5_27355001	chr3L_27355001	0.60	RAL-392
335	chr3L	27414366	27414392	mdg1	414	7427	4	26	'1-3	61.91	10.5	0.3	intron	Dbp80 +	chr3L_4_27410001	chr3L_27410001	0.25	RAL-392
336	chr3L	27415240	27415312	transib2	2788	3	4	72	'1-3	67.60	11.4	0.3	intron	Dbp80 +	chr3L_4_27415001	chr3L_27415001	0.25	RAL-392
337	chr3R	556379	556476	Juan	4201	4106	11	97	'5-6	63.86	5.2	1.8	intergenic	not near genes	chr3R_11_555001	chr3R_555001	0.45	RAL-392
338	chr3R	773623	773683	412	7514	23	14	60	'8-6	64.02	5.5	2.2	intergenic	not near genes	chr3R_14_770001	chr3R_770001	0.57	RAL-392
339	chr3R	2474282	2474337	Juan	4205	3973	7	55	'3-4	59.48	7.1	0.9	intergenic	not near genes	chr3R_7_2470001	chr3R_2470001	0.43	RAL-392
340	chr3R	2640846	2640923	copia	252	4892	5	77	'1-4	70.52	6.1	0.7	intron	CG41056 -	chr3R_5_2640001	chr3R_2640001	0.20	RAL-392
341	chr3R	2651170	2651253	flea	5002	26	4	83	'1-3	68.25	5.9	0.6	intron	CG41056 -	chr3R_4_2650001	chr3R_2650001	0.25	RAL-392
342	chr3R	2999751	2999834	McClintock	6422	25	6	83	'2-4	67.16	7.2	0.7	intron	CG42618 -	chr3R_6_2995001	chr3R_2995001	0.33	RAL-392
343	chr3R	3596935	3597018	Transpac	2	294	9	83	'6-3	67.49	9.9	0.8	intergenic	not near genes	chr3R_9_3595001	chr3R_3595001	0.67	RAL-392
344	chr3R	4190887	4190989	pogo	3	2082	9	102	'6-3	64.14	9.4	0.9	intergenic	not near genes	chr3R_9_4190001	chr3R_4190001	0.67	RAL-392
345	chr3R	4570255	4570307	Juan	3	4194	8	52	'2-6	56.64	10.1	0.7	intergenic	not near genes	chr3R_8_4570001	chr3R_4570001	0.25	RAL-392
346	chr3R	4679451	4679555	hopper	3	6	5	104	'4-1	70.63	6.9	0.6	intron	CG43427 +	chr3R_5_4675001	chr3R_4675001	0.80	RAL-392
347	chr3R	4885320	4885398	1360	3379	3367	11	78	'6-5	73.60	6.8	1.4	intergenic	not near genes	chr3R_11_4885001	chr3R_4885001	0.55	RAL-392
348	chr3R	4913557	4913653	1360	179	3385	17	96	'3-14	61.77	11.2	1.4	intron	Cdep +	chr3R_17_4910001	chr3R_4910001	0.18	RAL-392
349	chr3R	5134877	5134955	copia	254	37	12	78	'9-3	65.83	13.4	0.8	intergenic	not near genes	chr3R_12_5130001	chr3R_5130001	0.75	RAL-392
350	chr3R	5203785	5203872	Max-element	8534	32	6	87	'3-3	63.83	9.7	0.6	intron	cno -	chr3R_6_5200001	chr3R_5200001	0.50	RAL-392
351	chr3R	5245580	5245670	1360	6	8	10	90	'4-6	67.74	8.9	1.0	intron	CG12163 -	chr3R_10_5245001	chr3R_5245001	0.40	RAL-392
352	chr3R	5385383	5385469	FB	1	28	11	86	'5-6	64.16	5.4	1.7	intron	kkv -	chr3R_11_5385001	chr3R_5385001	0.45	RAL-392
353	chr3R	5444607	5444715	Bari1	1707	6	20	108	'12-8	68.28	10.9	1.7	intron	CG14669 +	chr3R_20_5440001	chr3R_5440001	0.60	RAL-392
354	chr3R	5910997	5911062	hopper	8	1412	6	65	'2-4	73.11	11.4	0.5	intron	CG34113 -	chr3R_6_5910001	chr3R_5910001	0.33	RAL-392
355	chr3R	6064473	6064557	412	20	7542	11	84	'5-6	60.59	7.8	1.2	intergenic	not near genes	chr3R_11_6060001	chr3R_6060001	0.45	RAL-392
356	chr3R	6133955	6134027	blood	20	363	10	72	'6-4	63.61	12.2	0.8	intergenic	not near genes	chr3R_10_6130001	chr3R_6130001	0.60	RAL-392
357	chr3R	6205135	6205243	Tabor	2	7316	27	108	'11-16	62.46	8.0	3.0	intron	Osi24 +	chr3R_27_6205001	chr3R_6205001	0.41	RAL-392
358	chr3R	6406215	6406303	flea	247	9	8	88	'5-3	62.89	10.4	0.7	intergenic	Dmtn -	chr3R_8_6405001	chr3R_6405001	0.62	RAL-392
359	chr3R	6423864	6423925	1360	3377	19	10	61	'4-6	63.75	5.9	1.4	intron	gpp +	chr3R_10_6420001	chr3R_6420001	0.40	RAL-392
360	chr3R	6436599	6436707	3S18	338	8	16	108	'5-11	66.03	8.8	1.6	intron	gpp +	chr3R_16_6435001	chr3R_6435001	0.31	RAL-392
361	chr3R	6456415	6456454	P-element	2886	10	4	39	'3-1	47.15	11.6	0.3	5` UTR	CG9727 -	chr3R_4_6455001	chr3R_6455001	0.75	RAL-392
362	chr3R	6526723	6526816	pogo	2087	5	15	93	'2-13	65.23	10.6	1.3	intergenic	not near genes	chr3R_15_6525001	chr3R_6525001	0.13	RAL-392
363	chr3R	6721612	6721702	roo	8677	391	11	90	'6-5	67.97	13.1	0.8	intron	pb -	chr3R_11_6720001	chr3R_6720001	0.55	RAL-392
364	chr3R	6930677	6930743	Tirant	8107	385	10	66	'2-8	65.35	6.8	1.3	intron	Antp -	chr3R_10_6930001	chr3R_6930001	0.20	RAL-392
365	chr3R	7317660	7317692	roo	9033	403	5	32	'3-2	65.63	5.2	0.8	intergenic	CG10029 -	chr3R_5_7315001	chr3R_7315001	0.60	RAL-392
366	chr3R	7388223	7388292	opus	7494	24	5	69	'4-1	61.77	10.9	0.4	5` UTR	CR45560 +	chr3R_5_7385001	chr3R_7385001	0.80	RAL-392
367	chr3R	7500869	7500944	FB	13	7	5	75	'1-4	63.92	10.3	0.4	intron	alpha-Est9 -	chr3R_5_7500001	chr3R_7500001	0.20	RAL-392
368	chr3R	7517099	7517180	mdg1	18	400	7	81	'3-4	59.78	10.6	0.6	intergenic	not near genes	chr3R_7_7515001	chr3R_7515001	0.43	RAL-392
369	chr3R	7754092	7754181	Stalker2	7248	7651	7	89	'3-4	57.90	7.3	0.8	intergenic	not near genes	chr3R_7_7750001	chr3R_7750001	0.43	RAL-392
370	chr3R	7755563	7755655	hobo	29	2708	4	92	'3-1	70.67	9.4	0.4	intergenic	not near genes	chr3R_4_7755001	chr3R_7755001	0.75	RAL-392
371	chr3R	7831251	7831332	flea	225	10	10	81	'7-3	66.63	5.5	1.5	intron	CG34384 +	chr3R_10_7830001	chr3R_7830001	0.70	RAL-392
372	chr3R	7882321	7882418	roo	410	25	4	97	'2-2	66.57	8.6	0.4	intron	CG17816 -	chr3R_4_7880001	chr3R_7880001	0.50	RAL-392
373	chr3R	8017732	8017798	mdg1	6	7421	7	66	'4-3	70.95	9.8	0.6	intron	CG2747 -	chr3R_7_8015001	chr3R_8015001	0.57	RAL-392
374	chr3R	8070765	8070814	roo	356	406	4	49	'2-2	70.53	7.9	0.4	intron	mAChR-B +	chr3R_4_8070001	chr3R_8070001	0.50	RAL-392
375	chr3R	8426286	8426407	roo	8667	411	13	121	'6-7	68.70	7.1	1.6	intron	CG45263 -	chr3R_13_8425001	chr3R_8425001	0.46	RAL-392
376	chr3R	8916304	8916402	FB	13	6	13	98	'3-10	63.43	5.2	2.1	intron	pyd -	chr3R_13_8915001	chr3R_8915001	0.23	RAL-392
377	chr3R	9113876	9113960	roo	8664	402	14	84	'5-9	68.76	7.1	1.7	intron	pum -	chr3R_14_9110001	chr3R_9110001	0.36	RAL-392
378	chr3R	9192493	9192603	invader3	5187	270	21	110	'5-16	63.98	8.6	2.2	intron	pum -	chr3R_21_9190001	chr3R_9190001	0.24	RAL-392
379	chr3R	9232836	9232923	Bari1	1676	6	15	87	'5-10	65.51	3.8	3.1	exon	pum -	chr3R_15_9230001	chr3R_9230001	0.33	RAL-392
380	chr3R	9347056	9347170	S-element	1709	1	15	114	'7-8	67.55	5.0	2.5	intron	CG45050 +	chr3R_15_9345001	chr3R_9345001	0.47	RAL-392
381	chr3R	9347585	9347701	S-element	1715	1709	22	116	'12-10	67.74	8.1	2.4	intron	CG45050 +	chr3R_22_9345001	chr3R_9345001	0.55	RAL-392
382	chr3R	9637784	9637877	Idefix	7388	24	11	93	'5-6	69.78	5.1	1.8	intergenic	Scm -,Dh44 +	chr3R_11_9635001	chr3R_9635001	0.45	RAL-392
383	chr3R	9947068	9947187	297	5	390	11	119	'2-9	68.15	3.9	2.2	intron	Glut4EF +	chr3R_11_9945001	chr3R_9945001	0.18	RAL-392
384	chr3R	10425647	10425756	mdg3	5258	5492	29	109	'18-11	65.26	7.6	3.4	intergenic	not near genes	chr3R_29_10425001	chr3R_10425001	0.62	RAL-392
385	chr3R	10680923	10681025	P-element	2882	6	9	102	'6-3	63.41	6.1	1.3	5` UTR	CG14688 -	chr3R_9_10680001	chr3R_10680001	0.67	RAL-392
386	chr3R	10720903	10720989	S-element	1714	1702	16	86	'11-5	66.08	5.2	2.6	intergenic	not near genes	chr3R_16_10720001	chr3R_10720001	0.69	RAL-392
387	chr3R	10736766	10736873	copia	4876	257	28	107	'13-15	66.03	4.7	4.9	intergenic	not near genes	chr3R_28_10735001	chr3R_10735001	0.46	RAL-392
388	chr3R	11108096	11108157	jockey	4709	4981	12	61	'4-8	63.69	6.3	1.6	intergenic	not near genes	chr3R_12_11105001	chr3R_11105001	0.33	RAL-392
389	chr3R	11136026	11136146	Stalker2	7650	7248	36	120	'23-13	61.06	7.4	4.3	intergenic	not near genes	chr3R_36_11135001	chr3R_11135001	0.64	RAL-392
390	chr3R	11144999	11145076	copia	242	4869	23	77	'7-16	68.04	9.3	2.2	exon	CheA86a -	chr3R_23_11140001	chr3R_11140001	0.30	RAL-392
391	chr3R	11163019	11163119	mdg1	414	1	20	100	'14-6	64.94	8.2	2.2	exon	CG4757 +	chr3R_20_11160001	chr3R_11160001	0.70	RAL-392
392	chr3R	11281264	11281347	roo	13	9047	11	83	'1-10	68.92	0.2	9.2	intron	CR31386 -	chr3R_11_11280001	chr3R_11280001	0.09	RAL-392
393	chr3R	11553650	11553741	hopper	14	4	11	91	'9-2	64.10	6.3	1.5	intergenic	CG14708 +	chr3R_11_11550001	chr3R_11550001	0.82	RAL-392
394	chr3R	12557688	12557805	opus	112	7500	13	117	'6-7	68.09	5.8	1.9	intron	Octbeta2R -	chr3R_13_12555001	chr3R_12555001	0.46	RAL-392
395	chr3R	12592890	12592992	opus	111	486	9	102	'6-3	68.82	4.9	1.5	intron	Octbeta2R -	chr3R_9_12590001	chr3R_12590001	0.67	RAL-392
396	chr3R	12597208	12597323	17.6	5	7417	9	115	'8-1	64.89	5.1	1.5	intergenic	not near genes	chr3R_9_12595001	chr3R_12595001	0.89	RAL-392
397	chr3R	12741671	12741775	flea	4754	235	21	104	'14-7	65.51	6.7	2.7	intergenic	CG5724 +,CG5999 -	chr3R_21_12740001	chr3R_12740001	0.67	RAL-392
398	chr3R	12949428	12949476	jockey	11	27	10	48	'6-4	64.79	4.3	1.9	intergenic	not near genes	chr3R_10_12945001	chr3R_12945001	0.60	RAL-392
399	chr3R	13099397	13099488	roo	391	8674	18	91	'5-13	66.75	8.7	1.9	intron	timeout +	chr3R_18_13095001	chr3R_13095001	0.28	RAL-392
400	chr3R	13106287	13106401	copia	252	4872	30	114	'17-13	62.98	6.7	3.9	intron	timeout +	chr3R_30_13105001	chr3R_13105001	0.57	RAL-392
401	chr3R	13176418	13176445	Gypsy6A_LTR	378	388	11	27	'7-4	58.84	10.6	0.9	intergenic	not near genes	chr3R_11_13175001	chr3R_13175001	0.64	RAL-392
402	chr3R	13436613	13436676	I-element	5347	34	22	63	'6-16	67.16	4.4	4.1	intergenic	not near genes	chr3R_22_13435001	chr3R_13435001	0.27	RAL-392
403	chr3R	14049325	14049441	transib2	4	2823	26	116	'13-13	65.75	6.3	3.6	intergenic	not near genes	chr3R_26_14045001	chr3R_14045001	0.50	RAL-392
404	chr3R	14336077	14336170	mdg3	5484	5251	16	93	'4-12	66.81	6.7	2.1	intron	NK7.1 -	chr3R_16_14335001	chr3R_14335001	0.25	RAL-392
405	chr3R	14563610	14563721	297	2	6966	7	111	'6-1	70.37	4.7	1.2	intergenic	not near genes	chr3R_7_14560001	chr3R_14560001	0.86	RAL-392
406	chr3R	14567636	14567745	mdg1	409	7038	20	109	'6-14	66.40	5.8	2.9	3` UTR	CG8066 -	chr3R_20_14565001	chr3R_14565001	0.30	RAL-392
407	chr3R	14650084	14650201	Bari1	1703	1	9	117	'4-5	66.34	9.5	0.9	intron	l(3)L1231 -	chr3R_9_14650001	chr3R_14650001	0.44	RAL-392
408	chr3R	14862264	14862356	mdg1	7039	7441	15	92	'9-6	63.49	2.5	4.3	intron	btsz -	chr3R_15_14860001	chr3R_14860001	0.60	RAL-392
409	chr3R	14995650	14995687	Doc	8	45	9	37	'4-5	54.93	17.1	0.5	intergenic	not near genes	chr3R_9_14995001	chr3R_14995001	0.44	RAL-392
410	chr3R	15362748	15362866	297	393	3	25	118	'15-10	69.13	4.4	4.6	3` UTR	Trax +	chr3R_25_15360001	chr3R_15360001	0.60	RAL-392
411	chr3R	15493231	15493317	pogo	2076	3	5	86	'3-2	67.27	9.4	0.5	3` UTR	CG5205 +	chr3R_5_15490001	chr3R_15490001	0.60	RAL-392
412	chr3R	15574761	15574823	Transpac	13	263	10	62	'8-2	67.00	9.2	1.0	intergenic	not near genes	chr3R_10_15570001	chr3R_15570001	0.80	RAL-392
413	chr3R	15768203	15768341	Stalker3T	209	203	8	138	'4-4	30.28	4.5	1.5	intergenic	not near genes	chr3R_8_15765001	chr3R_15765001	0.50	RAL-392
414	chr3R	16004152	16004241	jockey	4683	4983	18	89	'5-13	59.53	9.3	1.7	intergenic	srp +,CR42839 -	chr3R_18_16000001	chr3R_16000001	0.28	RAL-392
415	chr3R	16407398	16407512	Burdock	1	6386	36	114	'22-14	66.54	8.0	4.0	intergenic	CR45630 +	chr3R_36_16405001	chr3R_16405001	0.61	RAL-392
416	chr3R	16449877	16449938	I-element	22	5340	12	61	'6-6	67.87	9.0	1.2	intron	Pak3 -	chr3R_12_16445001	chr3R_16445001	0.50	RAL-392
417	chr3R	16798729	16798806	jockey	4670	4982	12	77	'7-5	56.79	8.0	1.3	intergenic	not near genes	chr3R_12_16795001	chr3R_16795001	0.58	RAL-392
418	chr3R	17068886	17068994	mdg1	414	6	28	108	'21-7	64.42	4.5	5.1	exon	Dad +	chr3R_28_17065001	chr3R_17065001	0.75	RAL-392
419	chr3R	17986554	17986666	412	489	3	22	112	'11-11	62.19	7.5	2.6	intron	cpo +	chr3R_22_17985001	chr3R_17985001	0.50	RAL-392
420	chr3R	19091268	19091360	blood	361	7009	20	92	'8-12	62.53	5.8	2.9	intron	cdi -	chr3R_20_19090001	chr3R_19090001	0.40	RAL-392
421	chr3R	19139167	19139232	roo	8690	9067	16	65	'12-4	71.16	21.2	0.7	3` UTR	Ppcs -	chr3R_16_19135001	chr3R_19135001	0.75	RAL-392
422	chr3R	19188186	19188284	roo	403	6	15	98	'9-6	62.37	11.3	1.2	intron	CG31475 +	chr3R_15_19185001	chr3R_19185001	0.60	RAL-392
423	chr3R	19890183	19890256	Juan	4025	4184	20	73	'7-13	64.53	2.2	6.2	intergenic	not near genes	chr3R_20_19890001	chr3R_19890001	0.35	RAL-392
424	chr3R	19984342	19984430	BS	3	5080	19	88	'9-10	62.03	6.3	2.6	intron	Hs6st -	chr3R_19_19980001	chr3R_19980001	0.47	RAL-392
425	chr3R	20316373	20316408	FB	5	7	6	35	'3-3	63.74	8.5	0.6	intron	CG42668 +	chr3R_6_20315001	chr3R_20315001	0.50	RAL-392
426	chr3R	20534998	20535100	pogo	6	2085	26	102	'15-11	68.05	6.1	3.7	5` UTR	MtnD +	chr3R_26_20530001	chr3R_20530001	0.58	RAL-392
427	chr3R	21608939	21608981	I-element	5318	5345	13	42	'9-4	67.81	5.8	1.9	intron	InR -	chr3R_13_21605001	chr3R_21605001	0.69	RAL-392
428	chr3R	21815189	21815281	hopper	18	11	17	92	'5-12	62.64	2.1	5.5	intron	CASK -	chr3R_17_21815001	chr3R_21815001	0.29	RAL-392
429	chr3R	21943680	21943762	pogo	2092	18	19	82	'11-8	66.53	4.0	3.8	intergenic	not near genes	chr3R_19_21940001	chr3R_21940001	0.58	RAL-392
430	chr3R	22975991	22976065	pogo	2064	3	21	74	'7-14	68.43	4.9	3.6	intergenic	not near genes	chr3R_21_22975001	chr3R_22975001	0.33	RAL-392
431	chr3R	22979322	22979414	Juan	4076	4199	26	92	'15-11	64.63	3.8	5.4	intergenic	not near genes	chr3R_26_22975001	chr3R_22975001	0.58	RAL-392
432	chr3R	23230605	23230692	pogo	3	2099	20	87	'16-4	56.97	4.1	3.9	intron	CG4467 -	chr3R_20_23230001	chr3R_23230001	0.80	RAL-392
433	chr3R	24233612	24233693	Bari1	1685	22	5	81	'2-3	59.81	10.0	0.5	intron	mask +	chr3R_5_24230001	chr3R_24230001	0.40	RAL-392
434	chr3R	24263291	24263407	roo	406	8666	20	116	'6-14	65.45	7.4	2.4	intron	jar -	chr3R_20_24260001	chr3R_24260001	0.30	RAL-392
435	chr3R	24383174	24383276	opus	110	7500	14	102	'4-10	64.02	8.1	1.5	3` UTR	CG17780 -	chr3R_14_24380001	chr3R_24380001	0.29	RAL-392
436	chr3R	24572720	24572824	P-element	7	5	15	104	'8-7	59.13	6.6	2.0	intron	CG13624 -	chr3R_15_24570001	chr3R_24570001	0.53	RAL-392
437	chr3R	24734900	24734967	hobo	2934	10	10	67	'1-9	61.62	6.3	1.4	intron	tok +	chr3R_10_24730001	chr3R_24730001	0.10	RAL-392
438	chr3R	24773089	24773181	mdg3	227	5249	17	92	'4-13	65.39	5.0	2.8	intron	CG42331 +	chr3R_17_24770001	chr3R_24770001	0.24	RAL-392
439	chr3R	25226699	25226817	roo	8663	9067	14	118	'6-8	58.50	3.4	3.2	intron	Cad96Cb -	chr3R_14_25225001	chr3R_25225001	0.43	RAL-392
440	chr3R	25240527	25240623	roo	22	409	15	96	'8-7	65.60	9.9	1.4	exon	to +	chr3R_15_25240001	chr3R_25240001	0.53	RAL-392
441	chr3R	25301441	25301546	I-element	5342	5124	28	105	'16-12	64.82	6.5	3.7	exon	CG13659 +	chr3R_28_25300001	chr3R_25300001	0.57	RAL-392
442	chr3R	25862771	25862859	roo	413	29	24	88	'16-8	68.18	9.4	2.3	intron	CG5890 +	chr3R_24_25860001	chr3R_25860001	0.67	RAL-392
443	chr3R	25883774	25883887	S-element	4	7	16	113	'4-12	68.92	8.1	1.8	intron	SppL +	chr3R_16_25880001	chr3R_25880001	0.25	RAL-392
444	chr3R	25952586	25952686	mdg1	7440	1	13	100	'6-7	66.23	5.9	1.9	intron	CCAP-R -	chr3R_13_25950001	chr3R_25950001	0.46	RAL-392
445	chr3R	26142629	26142743	roo	8668	405	24	114	'11-13	64.32	7.4	2.9	intergenic	not near genes	chr3R_24_26140001	chr3R_26140001	0.46	RAL-392
446	chr3R	26292625	26292708	jockey	4985	13	19	83	'7-12	63.67	4.5	3.5	intergenic	not near genes	chr3R_19_26290001	chr3R_26290001	0.37	RAL-392
447	chr3R	26437765	26437867	mdg1	7054	7456	40	102	'15-25	62.70	7.0	5.0	intergenic	not near genes	chr3R_40_26435001	chr3R_26435001	0.38	RAL-392
448	chr3R	26655612	26655655	BS	1	24	13	43	'9-4	57.22	6.9	1.6	intron	beat-VII -	chr3R_13_26655001	chr3R_26655001	0.69	RAL-392
449	chr3R	26687659	26687742	297	9	392	8	83	'3-5	73.20	4.7	1.4	intergenic	not near genes	chr3R_8_26685001	chr3R_26685001	0.38	RAL-392
450	chr3R	27082801	27082849	jockey	4765	4813	14	48	'5-9	60.38	8.8	1.4	3` UTR	CG14257 +	chr3R_14_27080001	chr3R_27080001	0.36	RAL-392
451	chr3R	27296858	27296892	Max-element	28	8230	9	34	'6-3	65.02	3.7	1.9	exon	CG3339 -	chr3R_9_27295001	chr3R_27295001	0.67	RAL-392
452	chr3R	27387208	27387305	Burdock	6388	22	4	97	'3-1	68.95	2.4	1.2	exon	side -	chr3R_4_27385001	chr3R_27385001	0.75	RAL-392
453	chr3R	27597166	27597279	Transpac	4922	5224	23	113	'10-13	64.39	5.0	3.8	intergenic	dsd -	chr3R_23_27595001	chr3R_27595001	0.43	RAL-392
454	chr3R	27974328	27974435	mdg1	421	7040	17	107	'8-9	62.00	3.9	3.5	exon	betaTub97EF -	chr3R_17_27970001	chr3R_27970001	0.47	RAL-392
455	chr3R	28206070	28206148	pogo	2062	7	19	78	'3-16	65.84	7.9	2.1	intron	CG34354 +	chr3R_19_28205001	chr3R_28205001	0.16	RAL-392
456	chr3R	28805456	28805524	jockey	10	4967	19	68	'6-13	62.33	7.7	2.2	intergenic	not near genes	chr3R_19_28805001	chr3R_28805001	0.32	RAL-392
457	chr3R	28965927	28966049	Tc3	313	312	4	122	'2-2	77.60	8.0	0.4	intron	CG14521 -	chr3R_4_28965001	chr3R_28965001	0.50	RAL-392
458	chr3R	28965931	28966046	1360	2	1	33	115	'12-21	65.15	8.0	3.7	intron	CG14521 -	chr3R_33_28965001	chr3R_28965001	0.36	RAL-392
459	chr3R	29354826	29354855	blood	19	7061	15	29	'8-7	63.42	28.9	0.5	intergenic	not near genes	chr3R_15_29350001	chr3R_29350001	0.53	RAL-392
460	chr3R	29446994	29447024	297	392	375	12	30	'8-4	65.79	11.1	1.0	intron	Ptp99A +	chr3R_12_29445001	chr3R_29445001	0.67	RAL-392
461	chr3R	29534584	29534665	Stalker4	7049	6892	4	81	'1-3	58.46	2.6	1.1	intergenic	CR43613 +	chr3R_4_29530001	chr3R_29530001	0.25	RAL-392
462	chr3R	30049789	30049907	297	394	1	24	118	'15-9	66.34	7.4	2.9	intron,intron	CG15528 -,CR44046 +	chr3R_24_30045001	chr3R_30045001	0.62	RAL-392
463	chr3R	30483041	30483115	Bari1	10	1667	4	74	'1-3	67.84	11.6	0.3	intron	PH4alphaEFB +	chr3R_4_30480001	chr3R_30480001	0.25	RAL-392
464	chr3R	30833283	30833397	rover	340	1	30	114	'6-24	66.59	8.6	3.1	intron	CG15544 +	chr3R_30_30830001	chr3R_30830001	0.20	RAL-392
465	chr3R	30894498	30894607	pogo	2	2088	18	109	'13-5	63.80	6.8	2.3	intron	Cyp4c3 +	chr3R_18_30890001	chr3R_30890001	0.72	RAL-392
466	chr3R	31143112	31143204	roo	394	8673	19	92	'11-8	65.91	6.8	2.4	intron	Gycbeta100B +	chr3R_19_31140001	chr3R_31140001	0.58	RAL-392
467	chr3R	31382945	31383061	mdg1	7	7044	22	116	'11-11	65.91	4.4	4.1	intron	CG1607 +	chr3R_22_31380001	chr3R_31380001	0.50	RAL-392
468	chr4	184017	184056	1360	159	132	11	39	'6-5	55.79	5.2	1.8	intergenic	CG2316 -	chr4_11_180001	chr4_180001	0.55	RAL-392
469	chr4	311190	311236	1360	3382	3336	21	46	'7-14	66.88	11.6	1.7	3` UTR	Zip102B -	chr4_21_310001	chr4_310001	0.33	RAL-392
470	chr4	311563	311601	1360	49	5	11	38	'4-7	64.35	4.4	2.0	3` UTR	Zip102B -	chr4_11_310001	chr4_310001	0.36	RAL-392
471	chr4	730255	730347	pogo	13	2082	8	92	'3-5	64.77	8.8	0.8	intron	bt +	chr4_8_730001	chr4_730001	0.38	RAL-392
472	chr4	843203	843253	INE-1	499	509	4	50	'1-3	69.62	4.4	0.7	intron	fd102C -	chr4_4_840001	chr4_840001	0.25	RAL-392
473	chr4	1166289	1166353	mdg3	223	5265	10	64	'3-7	68.05	9.0	1.0	exon	Kif3C +	chr4_10_1165001	chr4_1165001	0.30	RAL-392
474	chrX	292396	292449	G3	4358	4341	18	53	'11-7	63.14	5.5	2.8	intron,intron	CG3777 +,CG13375 -	chrX_18_290001	chrX_290001	0.61	RAL-392
475	chrX	689175	689270	hopper	4	1400	21	95	'9-12	64.22	5.0	3.5	intron	sdk +	chrX_21_685001	chrX_685001	0.43	RAL-392
476	chrX	1000130	1000241	Tabor	6	7320	35	111	'17-18	62.70	4.1	6.9	intergenic	not near genes	chrX_35_1000001	chrX_1000001	0.49	RAL-392
477	chrX	1018116	1018158	1360	201	189	6	42	'1-5	70.30	8.5	0.6	intron,intron	su(w[a]) +,CG11638 -	chrX_6_1015001	chrX_1015001	0.17	RAL-392
478	chrX	1087521	1087619	roo	8671	404	12	98	'10-2	63.94	4.4	2.2	5` UTR,intron	CR44779 +,CG3655 -	chrX_12_1085001	chrX_1085001	0.83	RAL-392
479	chrX	1656493	1656555	1360	15	1	19	62	'11-8	67.00	8.3	2.0	intron	Mur2B -	chrX_19_1655001	chrX_1655001	0.58	RAL-392
480	chrX	2476322	2476439	HMS-Beagle	6797	7038	26	117	'19-7	64.81	9.2	2.5	intron	trol -	chrX_26_2475001	chrX_2475001	0.73	RAL-392
481	chrX	2525588	2525694	roo	404	8671	17	106	'5-12	67.19	5.4	2.7	intron	trol -	chrX_17_2525001	chrX_2525001	0.29	RAL-392
482	chrX	2745128	2745243	FB	1	1	11	115	'4-7	68.73	6.5	1.5	intron	kirre +	chrX_11_2745001	chrX_2745001	0.36	RAL-392
483	chrX	2873474	2873560	HMS-Beagle	11	221	15	86	'9-6	66.58	5.2	2.4	intron	kirre +	chrX_15_2870001	chrX_2870001	0.60	RAL-392
484	chrX	3376138	3376183	412	7542	7536	15	45	'2-13	69.66	10.1	1.4	5` UTR,exon	CR44999 +,dm +	chrX_15_3375001	chrX_3375001	0.13	RAL-392
485	chrX	3771977	3772083	S-element	1705	1	9	106	'3-6	66.75	5.7	1.3	intron	tlk +	chrX_9_3770001	chrX_3770001	0.33	RAL-392
486	chrX	4198749	4198826	FB	1	15	4	77	'3-1	64.70	4.9	0.7	intron	Fas2 -	chrX_4_4195001	chrX_4195001	0.75	RAL-392
487	chrX	4243791	4243913	3S18	5765	342	21	122	'14-7	65.57	6.7	2.7	intergenic	Muc4B -	chrX_21_4240001	chrX_4240001	0.67	RAL-392
488	chrX	4267232	4267319	Bari1	37	1706	22	87	'7-15	64.11	4.3	4.2	intergenic	not near genes	chrX_22_4265001	chrX_4265001	0.32	RAL-392
489	chrX	4349816	4349866	hobo	3	37	5	50	'2-3	69.32	8.1	0.5	intron	norpA +	chrX_5_4345001	chrX_4345001	0.40	RAL-392
490	chrX	4764428	4764510	HMS-Beagle	6797	244	15	82	'11-4	61.80	1.4	6.2	intergenic	not near genes	chrX_15_4760001	chrX_4760001	0.73	RAL-392
491	chrX	4818903	4818966	roo	9042	8682	8	63	'6-2	63.22	2.9	2.1	intergenic	not near genes	chrX_8_4815001	chrX_4815001	0.75	RAL-392
492	chrX	4956397	4956445	jockey	4676	4704	4	48	'3-1	73.31	5.1	0.7	intergenic	CR44833 -,Ptp4E +	chrX_4_4955001	chrX_4955001	0.75	RAL-392
493	chrX	5092585	5092682	I-element	4	5346	17	97	'7-10	68.25	5.1	2.8	intron,intron	CG15465 +,rg +	chrX_17_5090001	chrX_5090001	0.41	RAL-392
494	chrX	5124348	5124434	Tc1-2	355	355	6	86	'5-1	69.97	1.9	2.1	intron,intron	CG15465 +,rg +	chrX_6_5120001	chrX_5120001	0.83	RAL-392
495	chrX	5261724	5261759	297	6582	6610	4	35	'1-3	72.25	5.9	0.6	intergenic	not near genes	chrX_4_5260001	chrX_5260001	0.25	RAL-392
496	chrX	5467141	5467233	Burdock	6383	14	20	92	'9-11	66.19	5.9	2.9	intron	SPR +	chrX_20_5465001	chrX_5465001	0.45	RAL-392
497	chrX	7382294	7382341	Doc	3	12	11	47	'6-5	64.04	4.3	2.1	intron,intron	CR44357 -,CG1677 -	chrX_11_7380001	chrX_7380001	0.55	RAL-392
498	chrX	8027414	8027505	Juan	4209	7	14	91	'9-5	61.24	5.8	2.1	intergenic	Tbh +	chrX_14_8025001	chrX_8025001	0.64	RAL-392
499	chrX	8213880	8213999	HMS-Beagle	6797	247	8	119	'7-1	70.87	5.0	1.3	intron	sdt +	chrX_8_8210001	chrX_8210001	0.88	RAL-392
500	chrX	8222751	8222781	jockey	4983	4961	4	30	'2-2	59.13	6.1	0.6	intron	sdt +	chrX_4_8220001	chrX_8220001	0.50	RAL-392
501	chrX	8276667	8276739	roo	9071	8688	12	72	'8-4	71.44	4.0	2.4	3` UTR	nAChRalpha3 -	chrX_12_8275001	chrX_8275001	0.67	RAL-392
502	chrX	9480881	9480910	I-element	5313	5342	8	29	'5-3	60.77	7.3	1.0	intron	mgl -	chrX_8_9480001	chrX_9480001	0.62	RAL-392
503	chrX	9514118	9514223	McClintock	5951	477	15	105	'10-5	70.39	3.7	3.2	intron	CG32700 -	chrX_15_9510001	chrX_9510001	0.67	RAL-392
504	chrX	9527823	9527921	roo	8686	408	17	98	'9-8	67.30	7.7	2.0	intron	CG32700 -	chrX_17_9525001	chrX_9525001	0.53	RAL-392
505	chrX	9538677	9538784	roo	4	409	12	107	'10-2	69.71	4.7	2.1	intron	CG32700 -	chrX_12_9535001	chrX_9535001	0.83	RAL-392
506	chrX	9576521	9576601	FB	17	19	8	80	'5-3	63.43	4.8	1.4	intron	CG32699 -	chrX_8_9575001	chrX_9575001	0.62	RAL-392
507	chrX	9577518	9577635	roo	2	411	9	117	'5-4	65.92	4.1	1.8	intron	CG32699 -	chrX_9_9575001	chrX_9575001	0.56	RAL-392
508	chrX	10446444	10446526	hobo	2709	2	7	82	'3-4	65.98	1.1	3.3	intron	CG32683 -	chrX_7_10445001	chrX_10445001	0.43	RAL-392
509	chrX	10824062	10824109	jockey	4714	4667	7	47	'4-3	65.67	8.1	0.8	intergenic	CR45624 +	chrX_7_10820001	chrX_10820001	0.57	RAL-392
510	chrX	11082131	11082249	Burdock	6137	252	23	118	'8-15	62.35	6.5	3.1	intron	sev -	chrX_23_11080001	chrX_11080001	0.35	RAL-392
511	chrX	11471187	11471304	3S18	5763	6101	33	117	'22-11	64.08	7.2	4.0	intron	CG43155 +	chrX_33_11470001	chrX_11470001	0.67	RAL-392
512	chrX	11544707	11544786	412	496	34	8	79	'2-6	66.93	4.1	1.6	intron	Drak +	chrX_8_11540001	chrX_11540001	0.25	RAL-392
513	chrX	11696579	11696705	TLD2_LTR	96	96	4	126	'2-2	72.08	4.2	0.8	intron	PhKgamma +	chrX_4_11695001	chrX_11695001	0.50	RAL-392
514	chrX	12081343	12081424	412	489	4	9	81	'4-5	58.61	3.8	1.9	intron,intron	CR43960 +,Ten-a +	chrX_9_12080001	chrX_12080001	0.44	RAL-392
515	chrX	12502944	12503050	pogo	1	2097	18	106	'14-4	66.61	7.1	2.2	intron	CG2556 +	chrX_18_12500001	chrX_12500001	0.78	RAL-392
516	chrX	12528695	12528734	3S18	40	3	9	39	'6-3	63.13	8.3	1.0	intron	CG43921 -	chrX_9_12525001	chrX_12525001	0.67	RAL-392
517	chrX	12583683	12583765	1360	3369	17	16	82	'5-11	63.78	6.5	2.1	intergenic	CG11138 -	chrX_16_12580001	chrX_12580001	0.31	RAL-392
518	chrX	12738230	12738329	mdg3	5256	237	12	99	'10-2	67.95	5.0	2.0	intron	Smr -	chrX_12_12735001	chrX_12735001	0.83	RAL-392
519	chrX	12941075	12941115	hopper	7	1383	7	40	'3-4	62.47	8.7	0.7	intron	fne +	chrX_7_12940001	chrX_12940001	0.43	RAL-392
520	chrX	13074612	13074721	springer	7522	9	5	109	'4-1	59.40	2.9	1.3	exon	rad +	chrX_5_13070001	chrX_13070001	0.80	RAL-392
521	chrX	13625791	13625893	S-element	1702	1715	10	102	'3-7	63.18	5.0	1.7	intron	NFAT +	chrX_10_13625001	chrX_13625001	0.30	RAL-392
522	chrX	13756520	13756638	S-element	5	1	9	118	'4-5	67.77	4.0	1.8	intron	CG32625 -	chrX_9_13755001	chrX_13755001	0.44	RAL-392
523	chrX	13762938	13763007	Bari1	19	1691	7	69	'2-5	67.89	4.8	1.2	intron	rdgB +	chrX_7_13760001	chrX_13760001	0.29	RAL-392
524	chrX	13818816	13818915	mdg3	5253	232	24	99	'16-8	65.55	5.5	3.7	intron	Clic -	chrX_24_13815001	chrX_13815001	0.67	RAL-392
525	chrX	14011368	14011452	pogo	11	2074	10	84	'7-3	65.47	5.9	1.4	intergenic	not near genes	chrX_10_14010001	chrX_14010001	0.70	RAL-392
526	chrX	14189013	14189114	Max-element	8519	3	15	101	'7-8	65.63	7.2	1.8	intergenic	not near genes	chrX_15_14185001	chrX_14185001	0.47	RAL-392
527	chrX	15314383	15314477	412	7532	3	9	94	'1-8	60.77	5.7	1.3	intron	gce +	chrX_9_15310001	chrX_15310001	0.11	RAL-392
528	chrX	15377326	15377442	roo	408	5	22	116	'7-15	66.42	7.8	2.5	intron	acj6 -	chrX_22_15375001	chrX_15375001	0.32	RAL-392
529	chrX	15499109	15499197	Bari1	1696	3	8	88	'4-4	67.78	3.3	1.9	intron	Gmap +	chrX_8_15495001	chrX_15495001	0.50	RAL-392
530	chrX	15746280	15746321	jockey2	3198	3249	7	41	'4-3	69.40	2.7	1.9	intergenic	CG8944 -,Tcp-1zeta +	chrX_7_15745001	chrX_15745001	0.57	RAL-392
531	chrX	15934332	15934446	3S18	5764	6099	20	114	'13-7	61.40	4.4	3.7	intergenic	Stim -	chrX_20_15930001	chrX_15930001	0.65	RAL-392
532	chrX	16727003	16727118	jockey2	3335	3336	4	115	'3-1	68.70	3.2	1.0	intergenic	CG32572 +,CG9634 -	chrX_4_16725001	chrX_16725001	0.75	RAL-392
533	chrX	17179135	17179216	Bari1	1666	3	4	81	'2-2	67.06	9.1	0.4	intron	baz +	chrX_4_17175001	chrX_17175001	0.50	RAL-392
534	chrX	17311190	17311224	I-element	5347	5313	7	34	'1-6	66.71	4.3	1.3	intergenic	not near genes	chrX_7_17310001	chrX_17310001	0.14	RAL-392
535	chrX	17379251	17379337	Burdock	6369	6144	16	86	'4-12	63.97	3.3	3.7	intergenic	CR43491 -	chrX_16_17375001	chrX_17375001	0.25	RAL-392
536	chrX	17476193	17476293	roo	404	8670	19	100	'12-7	69.47	6.2	2.6	intron	CG43658 -	chrX_19_17475001	chrX_17475001	0.63	RAL-392
537	chrX	17616227	17616341	pogo	2097	6	9	114	'4-5	68.17	5.5	1.4	intergenic	not near genes	chrX_9_17615001	chrX_17615001	0.44	RAL-392
538	chrX	17910241	17910338	opus	7115	489	7	97	'5-2	65.54	4.1	1.4	3` UTR	Vps4 +	chrX_7_17910001	chrX_17910001	0.71	RAL-392
539	chrX	18193718	18193819	hopper	1	1	14	101	'5-9	63.32	3.8	2.9	intron	Frq2 +	chrX_14_18190001	chrX_18190001	0.36	RAL-392
540	chrX	18196392	18196502	Bari1	1693	1	16	110	'4-12	63.17	10.7	1.4	intron	Frq2 +	chrX_16_18195001	chrX_18195001	0.25	RAL-392
541	chrX	18239337	18239373	jockey	10	18	11	36	'7-4	63.81	10.9	0.9	intergenic	not near genes	chrX_11_18235001	chrX_18235001	0.64	RAL-392
542	chrX	18353581	18353616	jockey	12	27	9	35	'6-3	62.75	8.2	1.0	intron	CG6123 -	chrX_9_18350001	chrX_18350001	0.67	RAL-392
543	chrX	18392966	18393006	jockey	4757	4762	11	40	'7-4	60.82	10.6	0.9	intron	CG32549 -	chrX_11_18390001	chrX_18390001	0.64	RAL-392
544	chrX	19022539	19022621	blood	379	26	17	82	'8-9	65.23	3.8	3.5	intron	CG43759 +	chrX_17_19020001	chrX_19020001	0.47	RAL-392
545	chrX	19228458	19228554	mdg3	5491	16	15	96	'2-13	64.11	7.7	1.7	intron	CG7884 +	chrX_15_19225001	chrX_19225001	0.13	RAL-392
546	chrX	19426210	19426318	mdg3	5254	5497	14	108	'12-2	65.57	8.0	1.6	intron	kek5 +	chrX_14_19425001	chrX_19425001	0.86	RAL-392
547	chrX	19459398	19459515	Stalker2	7247	399	36	117	'19-17	64.49	8.7	3.7	intron	kek5 +	chrX_36_19455001	chrX_19455001	0.53	RAL-392
548	chrX	19789301	19789403	412	9	7541	20	102	'12-8	65.50	9.0	2.0	intergenic	not near genes	chrX_20_19785001	chrX_19785001	0.60	RAL-392
549	chrX	19887122	19887164	P-element	7	2885	6	42	'4-2	50.40	3.2	1.4	intron,exon	Hers +,amn -	chrX_6_19885001	chrX_19885001	0.67	RAL-392
550	chrX	19998287	19998337	opus	9	473	6	50	'5-1	68.85	1.8	2.1	intergenic	not near genes	chrX_6_19995001	chrX_19995001	0.83	RAL-392
551	chrX	20003933	20003985	roo	356	409	16	52	'10-6	70.49	5.1	2.6	intergenic	not near genes	chrX_16_20000001	chrX_20000001	0.62	RAL-392
552	chrX	20099903	20099940	S-element	3	1691	12	37	'3-9	64.09	5.7	1.8	intergenic	not near genes	chrX_12_20095001	chrX_20095001	0.25	RAL-392
553	chrX	20258017	20258051	BS	6	25	5	34	'3-2	65.00	5.3	0.8	intergenic	not near genes	chrX_5_20255001	chrX_20255001	0.60	RAL-392
554	chrX	20366376	20366480	HMS-Beagle	246	6798	18	104	'5-13	65.59	4.0	3.6	intergenic	not near genes	chrX_18_20365001	chrX_20365001	0.28	RAL-392
555	chrX	20845898	20845994	roo	408	8669	12	96	'2-10	68.32	5.3	1.9	intron	shakB -	chrX_12_20845001	chrX_20845001	0.17	RAL-392
556	chrX	21189997	21190080	BS	5082	4772	23	83	'9-14	63.70	4.8	4.0	intergenic	not near genes	chrX_23_21185001	chrX_21185001	0.39	RAL-392
557	chrX	21254465	21254556	pogo	9	2098	13	91	'11-2	68.51	4.8	2.2	intron	CG32521 -	chrX_13_21250001	chrX_21250001	0.85	RAL-392
558	chrX	21322750	21322846	Juan	4205	4025	24	96	'10-14	65.85	6.5	3.2	intron	Dd -	chrX_24_21320001	chrX_21320001	0.42	RAL-392
559	chrX	21590795	21590899	opus	499	4	8	104	'5-3	67.85	6.7	1.0	intergenic	not near genes	chrX_8_21590001	chrX_21590001	0.62	RAL-392
560	chrX	21638089	21638125	gtwin	36	6916	10	36	'7-3	61.42	6.8	1.3	intergenic	not near genes	chrX_10_21635001	chrX_21635001	0.70	RAL-392
561	chrX	21667898	21667925	gypsy2	17	23	6	27	'5-1	67.74	8.7	0.6	intergenic	not near genes	chrX_6_21665001	chrX_21665001	0.83	RAL-392
562	chrX	21668525	21668642	mdg1	7455	7038	24	117	'16-8	69.03	8.8	2.4	intergenic	not near genes	chrX_24_21665001	chrX_21665001	0.67	RAL-392
563	chrX	22218798	22218848	1731	1	51	15	50	'8-7	67.42	2.6	4.2	intergenic	not near genes	chrX_15_22215001	chrX_22215001	0.53	RAL-392
564	chrX	22442617	22442653	1360	3344	3354	5	36	'3-2	61.35	2.9	1.3	intergenic	not near genes	chrX_5_22440001	chrX_22440001	0.60	RAL-392
565	chrX	22556515	22556642	Transpac	4918	309	16	127	'14-2	65.40	4.1	3.1	intergenic	not near genes	chrX_16_22555001	chrX_22555001	0.88	RAL-392
566	chrX	22614225	22614340	S-element	1715	8	18	115	'11-7	69.50	5.5	2.8	intron	Cda4 -	chrX_18_22610001	chrX_22610001	0.61	RAL-392
567	chrX	22643962	22644074	HMS-Beagle	240	6800	29	112	'15-14	64.69	5.1	4.8	intergenic	not near genes	chrX_29_22640001	chrX_22640001	0.52	RAL-392
568	chrX	22726192	22726233	Helena	1282	1287	4	41	'3-1	57.97	7.7	0.5	intron	CR44997 +	chrX_4_22725001	chrX_22725001	0.75	RAL-392
569	chrX	22789888	22789970	I-element	5342	13	15	82	'9-6	68.60	3.6	3.3	intron	CR44997 +	chrX_15_22785001	chrX_22785001	0.60	RAL-392
570	chrX	23064984	23065103	Burdock	2	254	22	119	'8-14	66.27	7.8	2.5	intergenic	not near genes	chrX_22_23060001	chrX_23060001	0.36	RAL-392
571	chrY	424980	425018	McClintock	467	429	12	38	'6-6	63.74	2.8	3.2	intergenic	not near genes	chrY_12_420001	chrY_420001	0.50	RAL-392
572	chrY	3648876	3648905	Stalker2	7452	7469	10	29	'5-5	62.48	3.3	2.3	intergenic	not near genes	chrY_10_3645001	chrY_3645001	0.50	RAL-392