SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 47464 47481 chr2L 52570 52590 jockey 7 5115 6.5 13.0 9.8 0.6 5126 chr2L 47464 intron Cda5 - chr2L 50027 intron Cda5 - chr2L 52590 intron Cda5 - chr2L_7_50001 chr2L_50001 RAL-392 2 chr2L 47486 47488 chr2L 52566 52595 jockey 4 5095 5.0 12.0 8.5 0.4 5109 chr2L 47486 intron Cda5 - chr2L 50040 intron Cda5 - chr2L 52595 intron Cda5 - chr2L_4_50001 chr2L_50001 RAL-392 3 chr2L 347866 347919 chr2L 355386 355391 blood 11 7512 1.5 8.0 4.8 1.9 7525 chr2L 347866 3` UTR Plc21C + chr2L 351628 intron Plc21C + chr2L 355391 3` UTR Plc21C + chr2L_11_350001 chr2L_350001 RAL-392 4 chr2L 371432 371453 chr2L 371526 371552 8 95 4.0 9.0 6.5 1.1 120 chr2L 371432 intergenic not near genes chr2L 371492 intergenic not near genes chr2L 371552 intergenic not near genes chr2L_8_370001 chr2L_370001 RAL-392 5 chr2L 407928 407970 chr2L 408029 408071 16 98 4.5 5.0 4.8 2.8 143 chr2L 407928 3` UTR RpI135 + chr2L 408000 intergenic AP-2alpha -,RpI135 + chr2L 408071 3` UTR AP-2alpha - chr2L_16_405001 chr2L_405001 RAL-392 6 chr2L 467345 467351 chr2L 467462 467470 5 119 20.5 14.0 17.2 0.3 125 chr2L 467345 intron CG4297 - chr2L 467408 intron CG4297 - chr2L 467470 intron CG4297 - chr2L_5_465001 chr2L_465001 RAL-392 7 chr2L 544810 544822 chr2L 544913 544925 4 103 11.5 2.0 6.8 0.5 115 chr2L 544810 intergenic Ets21C -,Spp -,nAChRbeta3 + chr2L 544868 intergenic Ets21C -,Spp -,nAChRbeta3 + chr2L 544925 3` UTR Ets21C - chr2L_4_540001 chr2L_540001 RAL-392 8 chr2L 544833 544859 chr2L 544911 544962 5 96 6.0 2.0 4.0 1.0 129 chr2L 544833 intergenic Ets21C -,Spp -,nAChRbeta3 + chr2L 544898 intergenic Ets21C -,nAChRbeta3 +,Spp - chr2L 544962 3` UTR Ets21C - chr2L_5_540001 chr2L_540001 RAL-392 9 chr2L 764545 764559 chr2L 764653 764669 9 113 8.5 2.5 5.5 1.4 124 chr2L 764545 intergenic not near genes chr2L 764607 intergenic not near genes chr2L 764669 intergenic not near genes chr2L_9_760001 chr2L_760001 RAL-392 10 chr2L 770473 770488 chr2L 772244 772244 Bari1 4 1771 3.5 1.5 2.5 1.1 1771 chr2L 770473 intergenic not near genes chr2L 771358 intergenic not near genes chr2L 772244 intergenic CR44614 + chr2L_4_770001 chr2L_770001 RAL-392 11 chr2L 798873 798901 chr2L 799192 799223 11 322 2.5 4.0 3.2 2.6 350 chr2L 798873 intergenic not near genes chr2L 799048 intergenic not near genes chr2L 799223 intergenic not near genes chr2L_11_795001 chr2L_795001 RAL-392 12 chr2L 849465 849485 chr2L 849564 849591 7 100 4.0 5.0 4.5 1.3 126 chr2L 849465 intron drongo - chr2L 849528 intron drongo - chr2L 849591 intron drongo - chr2L_7_845001 chr2L_845001 RAL-392 13 chr2L 877838 877865 chr2L 877924 877966 4 95 2.5 3.0 2.8 1.1 128 chr2L 877838 3` UTR,exon CG15824 -,ninaA + chr2L 877902 3` UTR,intron CG15824 -,ninaA + chr2L 877966 3` UTR,intron CG15824 -,ninaA + chr2L_4_875001 chr2L_875001 RAL-392 14 chr2L 922444 922493 chr2L 922545 922584 7 93 4.0 4.0 4.0 1.4 140 chr2L 922444 intergenic CG4341 + chr2L 922514 intergenic CG4341 + chr2L 922584 intergenic CG4341 + chr2L_7_920001 chr2L_920001 RAL-392 15 chr2L 964555 964572 chr2L 964659 964676 7 102 0.0 5.5 2.8 1.8 121 chr2L 964555 intergenic not near genes chr2L 964616 intergenic not near genes chr2L 964676 intergenic not near genes chr2L_7_960001 chr2L_960001 RAL-392 16 chr2L 976874 976908 chr2L 984514 984564 roo 11 7654 5.0 2.5 3.8 2.3 7690 chr2L 976874 intergenic not near genes chr2L 980719 intergenic not near genes chr2L 984564 intergenic not near genes chr2L_11_980001 chr2L_980001 RAL-392 17 chr2L 994474 994491 chr2L 994692 994717 5 228 2.5 6.0 4.2 1.0 243 chr2L 994474 intergenic not near genes chr2L 994596 intergenic not near genes chr2L 994717 intergenic not near genes chr2L_5_990001 chr2L_990001 RAL-392 18 chr2L 996707 996755 chr2L 1005822 1005870 roo 19 9114 4.5 3.5 4.0 3.8 9163 chr2L 996707 intergenic not near genes chr2L 1001288 intergenic not near genes chr2L 1005870 intergenic not near genes chr2L_19_1000001 chr2L_1000001 RAL-392 19 chr2L 1035546 1035594 chr2L 1035637 1035686 12 88 3.5 3.5 3.5 2.7 140 chr2L 1035546 intron IA-2 - chr2L 1035616 intron IA-2 - chr2L 1035686 intron IA-2 - chr2L_12_1035001 chr2L_1035001 RAL-392 20 chr2L 1042602 1042621 chr2L 1042699 1042708 8 94 5.5 0.0 2.8 2.1 106 chr2L 1042602 intron IA-2 - chr2L 1042655 intron IA-2 - chr2L 1042708 intron IA-2 - chr2L_8_1040001 chr2L_1040001 RAL-392 21 chr2L 1114021 1114047 chr2L 1114227 1114228 6 218 6.0 4.0 5.0 1.0 207 chr2L 1114021 3` UTR CG14340 + chr2L 1114124 3` UTR CG14340 + chr2L 1114228 intergenic CG14340 +,Pino - chr2L_6_1110001 chr2L_1110001 RAL-392 22 chr2L 1156840 1156887 chr2L 1156965 1157012 7 121 0.5 2.0 1.2 3.2 172 chr2L 1156840 intron capt - chr2L 1156926 intron capt - chr2L 1157012 intron capt - chr2L_7_1155001 chr2L_1155001 RAL-392 23 chr2L 1178677 1178703 chr2L 1178761 1178807 5 91 9.5 5.0 7.2 0.6 130 chr2L 1178677 intron CG4896 + chr2L 1178742 intron CG4896 + chr2L 1178807 intron CG4896 + chr2L_5_1175001 chr2L_1175001 RAL-392 24 chr2L 1220116 1220152 chr2L 1227602 1227637 blood 10 7482 6.0 3.5 4.8 1.7 7521 chr2L 1220116 intron CG42329 + chr2L 1223876 intron CG42329 + chr2L 1227637 intron CG42329 + chr2L_10_1220001 chr2L_1220001 RAL-392 25 chr2L 1261135 1261144 chr2L 1261226 1261246 5 99 0.0 0.5 0.2 4.2 111 chr2L 1261135 intron robo3 + chr2L 1261190 intron robo3 + chr2L 1261246 intron robo3 + chr2L_5_1260001 chr2L_1260001 RAL-392 26 chr2L 1261153 1261252 chr2L 1261220 1261332 8 90 1.0 0.0 0.5 5.3 179 chr2L 1261153 intron robo3 + chr2L 1261242 intron robo3 + chr2L 1261332 intron robo3 + chr2L_8_1260001 chr2L_1260001 RAL-392 27 chr2L 1373442 1373460 chr2L 1373646 1373660 4 205 3.5 6.0 4.8 0.7 218 chr2L 1373442 intergenic not near genes chr2L 1373551 intergenic not near genes chr2L 1373660 intergenic not near genes chr2L_4_1370001 chr2L_1370001 RAL-392 28 chr2L 1393971 1394020 chr2L 1394068 1394097 4 92 3.5 0.5 2.0 1.3 126 chr2L 1393971 intron lea - chr2L 1394034 intron lea - chr2L 1394097 intron lea - chr2L_4_1390001 chr2L_1390001 RAL-392 29 chr2L 1517942 1517962 chr2L 1518044 1518067 5 103 6.0 6.5 6.2 0.7 125 chr2L 1517942 exon halo - chr2L 1518004 exon halo - chr2L 1518067 5` UTR halo - chr2L_5_1515001 chr2L_1515001 RAL-392 30 chr2L 1517965 1517983 chr2L 1518036 1518052 6 85 2.0 5.0 3.5 1.3 87 chr2L 1517965 exon halo - chr2L 1518008 exon halo - chr2L 1518052 exon halo - chr2L_6_1515001 chr2L_1515001 RAL-392 31 chr2L 1570672 1570718 chr2L 1573564 1573600 F-element 16 2890 4.0 4.0 4.0 3.2 2928 chr2L 1570672 intron haf + chr2L 1572136 intron haf + chr2L 1573600 intron haf + chr2L_16_1570001 chr2L_1570001 RAL-392 32 chr2L 1590947 1590991 chr2L 1591043 1591047 10 88 5.0 3.5 4.2 1.9 100 chr2L 1590947 intron haf + chr2L 1590997 intron haf + chr2L 1591047 intron haf + chr2L_10_1590001 chr2L_1590001 RAL-392 33 chr2L 1678955 1679003 chr2L 1686440 1686475 blood 12 7482 3.5 6.0 4.8 2.1 7520 chr2L 1678955 intron chinmo + chr2L 1682715 intron chinmo + chr2L 1686475 intron chinmo + chr2L_12_1680001 chr2L_1680001 RAL-392 34 chr2L 1711347 1711370 chr2L 1711685 1711708 mdg3 5 337 5.0 4.5 4.8 0.9 361 chr2L 1711347 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711528 3` UTR frtz - chr2L 1711708 3` UTR frtz - chr2L_5_1710001 chr2L_1710001 RAL-392 35 chr2L 1721813 1721852 chr2L 1721915 1721921 4 87 1.0 3.0 2.0 1.3 108 chr2L 1721813 intron Rim2 - chr2L 1721867 intron Rim2 - chr2L 1721921 intron Rim2 - chr2L_4_1720001 chr2L_1720001 RAL-392 36 chr2L 1993190 1993222 chr2L 1993286 1993286 8 87 2.0 2.0 2.0 2.7 96 chr2L 1993190 intergenic not near genes chr2L 1993238 intergenic not near genes chr2L 1993286 intergenic not near genes chr2L_8_1990001 chr2L_1990001 RAL-392 37 chr2L 2007833 2007871 chr2L 2007961 2007983 16 125 3.5 4.0 3.8 3.3 150 chr2L 2007833 intergenic CR45712 + chr2L 2007908 intergenic CR45712 + chr2L 2007983 intergenic CR45712 +,Nplp4 + chr2L_16_2005001 chr2L_2005001 RAL-392 38 chr2L 2049202 2049239 chr2L 2049301 2049343 10 101 0.5 5.0 2.8 2.6 141 chr2L 2049202 intergenic not near genes chr2L 2049272 intergenic not near genes chr2L 2049343 intergenic not near genes chr2L_10_2045001 chr2L_2045001 RAL-392 39 chr2L 2100387 2100406 chr2L 2109528 2109546 roo 6 9142 7.5 2.5 5.0 1.0 9159 chr2L 2100387 intron dpr3 - chr2L 2104966 intron dpr3 - chr2L 2109546 intron dpr3 - chr2L_6_2100001 chr2L_2100001 RAL-392 40 chr2L 2112126 2112139 chr2L 2119777 2119811 opus 5 7665 1.5 6.0 3.8 1.0 7685 chr2L 2112126 intergenic not near genes chr2L 2115968 intergenic not near genes chr2L 2119811 intergenic not near genes chr2L_5_2115001 chr2L_2115001 RAL-392 41 chr2L 2316382 2316409 chr2L 2316507 2316520 4 119 1.0 1.0 1.0 2.0 138 chr2L 2316382 intron,intron CG9967 -,eys + chr2L 2316451 intron,intron CG9967 -,eys + chr2L 2316520 intron,intron CG9967 -,eys + chr2L_4_2315001 chr2L_2315001 RAL-392 42 chr2L 2317103 2317128 chr2L 2317294 2317315 5 186 26.5 20.0 23.2 0.2 212 chr2L 2317103 intron,intron CG9967 -,eys + chr2L 2317209 intron,intron CG9967 -,eys + chr2L 2317315 intron,intron CG9967 -,eys + chr2L_5_2315001 chr2L_2315001 RAL-392 43 chr2L 2347860 2347886 chr2L 2348109 2348131 9 253 3.5 4.5 4.0 1.8 271 chr2L 2347860 intron,intron CG9967 -,eys + chr2L 2347996 intron,intron CG9967 -,eys + chr2L 2348131 intron,intron CG9967 -,eys + chr2L_9_2345001 chr2L_2345001 RAL-392 44 chr2L 2372357 2372404 chr2L 2372452 2372493 7 95 0.0 2.5 1.2 3.2 136 chr2L 2372357 intergenic CG3609 - chr2L 2372425 intergenic CG3609 - chr2L 2372493 3` UTR CG3609 - chr2L_7_2370001 chr2L_2370001 RAL-392 45 chr2L 2447810 2447861 chr2L 2447910 2447961 31 93 6.0 6.5 6.2 4.3 151 chr2L 2447810 intron dpp + chr2L 2447886 intron dpp + chr2L 2447961 intron dpp + chr2L_31_2445001 chr2L_2445001 RAL-392 46 chr2L 2504218 2504238 chr2L 2504308 2504336 9 93 1.5 4.5 3.0 2.2 118 chr2L 2504218 intergenic not near genes chr2L 2504277 intergenic not near genes chr2L 2504336 intergenic not near genes chr2L_9_2500001 chr2L_2500001 RAL-392 47 chr2L 2557200 2557215 chr2L 2557280 2557311 4 92 1.5 6.0 3.8 0.8 111 chr2L 2557200 intergenic not near genes chr2L 2557256 intergenic not near genes chr2L 2557311 intergenic not near genes chr2L_4_2555001 chr2L_2555001 RAL-392 48 chr2L 2619203 2619211 chr2L 2619309 2619317 4 106 7.5 4.0 5.8 0.6 114 chr2L 2619203 intergenic not near genes chr2L 2619260 intergenic not near genes chr2L 2619317 intergenic not near genes chr2L_4_2615001 chr2L_2615001 RAL-392 49 chr2L 2619212 2619244 chr2L 2619302 2619345 12 101 6.0 3.5 4.8 2.1 133 chr2L 2619212 intergenic not near genes chr2L 2619278 intergenic not near genes chr2L 2619345 intergenic not near genes chr2L_12_2615001 chr2L_2615001 RAL-392 50 chr2L 2724386 2724437 chr2L 2724482 2724505 11 89 5.0 7.0 6.0 1.6 119 chr2L 2724386 intergenic not near genes chr2L 2724446 intergenic not near genes chr2L 2724505 intergenic not near genes chr2L_11_2720001 chr2L_2720001 RAL-392 51 chr2L 2772596 2772624 chr2L 2779194 2779228 297 10 6600 6.5 4.0 5.2 1.6 6632 chr2L 2772596 3` UTR Syt1 - chr2L 2775912 intron Syt1 - chr2L 2779228 3` UTR Syt1 - chr2L_10_2775001 chr2L_2775001 RAL-392 52 chr2L 2800595 2800613 chr2L 2800691 2800702 5 96 4.0 2.5 3.2 1.2 107 chr2L 2800595 intergenic not near genes chr2L 2800648 intergenic not near genes chr2L 2800702 intergenic not near genes chr2L_5_2800001 chr2L_2800001 RAL-392 53 chr2L 2823751 2823762 chr2L 2823850 2823850 4 100 7.5 3.0 5.2 0.6 99 chr2L 2823751 intron,exon Duox -,CG3123 - chr2L 2823800 intron,exon Duox -,CG3123 - chr2L 2823850 intron,exon Duox -,CG3123 - chr2L_4_2820001 chr2L_2820001 RAL-392 54 chr2L 2823763 2823779 chr2L 2823849 2823890 11 102 4.0 3.0 3.5 2.4 127 chr2L 2823763 intron,exon Duox -,CG3123 - chr2L 2823826 intron,exon Duox -,CG3123 - chr2L 2823890 intron,exon Duox -,CG3123 - chr2L_11_2820001 chr2L_2820001 RAL-392 55 chr2L 2826537 2826576 chr2L 2826634 2826656 10 91 0.0 4.5 2.2 3.1 119 chr2L 2826537 intron Duox - chr2L 2826596 intron Duox - chr2L 2826656 intron Duox - chr2L_10_2825001 chr2L_2825001 RAL-392 56 chr2L 2937403 2937446 chr2L 2937495 2937529 9 88 4.0 2.0 3.0 2.2 126 chr2L 2937403 intron lilli + chr2L 2937466 intron lilli + chr2L 2937529 intron lilli + chr2L_9_2935001 chr2L_2935001 RAL-392 57 chr2L 3073014 3073027 chr2L 3078237 3078250 copia 4 5223 7.5 4.0 5.8 0.6 5236 chr2L 3073014 intron toc - chr2L 3075632 intron toc - chr2L 3078250 intron toc - chr2L_4_3075001 chr2L_3075001 RAL-392 58 chr2L 3073032 3073060 chr2L 3078234 3078283 copia 8 5214 4.0 3.5 3.8 1.7 5251 chr2L 3073032 intron toc - chr2L 3075658 intron toc - chr2L 3078283 intron toc - chr2L_8_3075001 chr2L_3075001 RAL-392 59 chr2L 3134283 3134290 chr2L 3134373 3134386 6 93 4.0 7.0 5.5 0.9 103 chr2L 3134283 intron toc - chr2L 3134334 intron toc - chr2L 3134386 intron toc - chr2L_6_3130001 chr2L_3130001 RAL-392 60 chr2L 3147283 3147297 chr2L 3147350 3147374 5 79 6.0 3.0 4.5 0.9 91 chr2L 3147283 3` UTR Mad - chr2L 3147328 3` UTR Mad - chr2L 3147374 3` UTR Mad - chr2L_5_3145001 chr2L_3145001 RAL-392 61 chr2L 3156539 3156565 chr2L 3156656 3156672 5 110 1.0 7.5 4.2 1.0 133 chr2L 3156539 intron Mad - chr2L 3156606 intron Mad - chr2L 3156672 intron Mad - chr2L_5_3155001 chr2L_3155001 RAL-392 62 chr2L 3202719 3202772 chr2L 3210165 3210221 mdg1 28 7446 4.0 1.0 2.5 8.0 7502 chr2L 3202719 intergenic not near genes chr2L 3206470 intergenic not near genes chr2L 3210221 intergenic CR45336 + chr2L_28_3205001 chr2L_3205001 RAL-392 63 chr2L 3221509 3221522 chr2L 3221714 3221752 8 227 4.0 1.5 2.8 2.1 243 chr2L 3221509 intergenic not near genes chr2L 3221630 intergenic not near genes chr2L 3221752 intergenic not near genes chr2L_8_3220001 chr2L_3220001 RAL-392 64 chr2L 3221524 3221536 chr2L 3221712 3221716 7 207 2.0 1.0 1.5 2.8 192 chr2L 3221524 intergenic not near genes chr2L 3221620 intergenic not near genes chr2L 3221716 intergenic not near genes chr2L_7_3220001 chr2L_3220001 RAL-392 65 chr2L 3251492 3251525 chr2L 3259061 3259104 springer 11 7577 5.0 3.0 4.0 2.2 7612 chr2L 3251492 intergenic not near genes chr2L 3255298 intergenic not near genes chr2L 3259104 intergenic not near genes chr2L_11_3255001 chr2L_3255001 RAL-392 66 chr2L 3291232 3291270 chr2L 3291317 3291370 10 86 4.0 5.5 4.8 1.7 138 chr2L 3291232 intergenic CG9664 - chr2L 3291301 3` UTR CG9664 - chr2L 3291370 3` UTR CG9664 - chr2L_10_3290001 chr2L_3290001 RAL-392 67 chr2L 3314681 3314724 chr2L 3314778 3314821 17 92 5.0 5.0 5.0 2.8 140 chr2L 3314681 intron CG3277 + chr2L 3314751 intron CG3277 + chr2L 3314821 intron CG3277 + chr2L_17_3310001 chr2L_3310001 RAL-392 68 chr2L 3366995 3367026 chr2L 3367165 3367196 8 166 5.5 3.0 4.2 1.5 201 chr2L 3366995 intron CG34394 - chr2L 3367096 intron CG34394 - chr2L 3367196 intron CG34394 - chr2L_8_3365001 chr2L_3365001 RAL-392 69 chr2L 3367029 3367038 chr2L 3367164 3367206 6 158 4.0 2.5 3.2 1.4 177 chr2L 3367029 intron CG34394 - chr2L 3367118 intron CG34394 - chr2L 3367206 intron CG34394 - chr2L_6_3365001 chr2L_3365001 RAL-392 70 chr2L 3388578 3388630 chr2L 3388839 3388875 pogo 19 257 4.0 5.0 4.5 3.5 297 chr2L 3388578 intergenic CG42460 - chr2L 3388726 intergenic CG42460 - chr2L 3388875 intergenic CG42460 -,CR44791 + chr2L_19_3385001 chr2L_3385001 RAL-392 71 chr2L 3582882 3582908 chr2L 3582968 3582995 9 91 1.0 6.0 3.5 2.0 113 chr2L 3582882 intergenic not near genes chr2L 3582938 intergenic not near genes chr2L 3582995 intergenic not near genes chr2L_9_3580001 chr2L_3580001 RAL-392 72 chr2L 3634087 3634130 chr2L 3634189 3634217 33 99 6.5 9.5 8.0 3.7 130 chr2L 3634087 intron for - chr2L 3634152 intron for - chr2L 3634217 intron for - chr2L_33_3630001 chr2L_3630001 RAL-392 73 chr2L 3634131 3634140 chr2L 3634182 3634196 6 79 8.0 8.5 8.2 0.7 65 chr2L 3634131 intron for - chr2L 3634164 intron for - chr2L 3634196 intron for - chr2L_6_3630001 chr2L_3630001 RAL-392 74 chr2L 3649792 3649811 chr2L 3654988 3654989 copia 9 5206 5.0 2.5 3.8 1.9 5197 chr2L 3649792 intron for - chr2L 3652390 intron for - chr2L 3654989 intron for - chr2L_9_3650001 chr2L_3650001 RAL-392 75 chr2L 3663298 3663310 chr2L 3663387 3663409 4 96 10.0 2.0 6.0 0.6 111 chr2L 3663298 5` UTR CG34340 + chr2L 3663354 intron CG34340 + chr2L 3663409 intron CG34340 + chr2L_4_3660001 chr2L_3660001 RAL-392 76 chr2L 3663312 3663341 chr2L 3663386 3663400 11 86 6.0 2.0 4.0 2.2 88 chr2L 3663312 intron CG34340 + chr2L 3663356 intron CG34340 + chr2L 3663400 intron CG34340 + chr2L_11_3660001 chr2L_3660001 RAL-392 77 chr2L 3673879 3673903 chr2L 3673990 3674004 6 113 4.0 1.5 2.8 1.6 125 chr2L 3673879 intron CG34340 + chr2L 3673942 intron CG34340 + chr2L 3674004 intron CG34340 + chr2L_6_3670001 chr2L_3670001 RAL-392 78 chr2L 3686029 3686057 chr2L 3686129 3686165 9 106 4.0 9.5 6.8 1.2 136 chr2L 3686029 intron CG34340 + chr2L 3686097 intron CG34340 + chr2L 3686165 intron CG34340 + chr2L_9_3685001 chr2L_3685001 RAL-392 79 chr2L 3751398 3751439 chr2L 3751661 3751695 19 262 9.0 5.0 7.0 2.4 297 chr2L 3751398 intron CG10019 + chr2L 3751546 intron CG10019 + chr2L 3751695 intron CG10019 + chr2L_19_3750001 chr2L_3750001 RAL-392 80 chr2L 3784787 3784814 chr2L 3785666 3785687 9 878 25.5 21.0 23.2 0.4 900 chr2L 3784787 intergenic CG31960 + chr2L 3785237 exon CG31960 + chr2L 3785687 intergenic CG31958 +,CG31960 + chr2L_9_3785001 chr2L_3785001 RAL-392 81 chr2L 3819010 3819057 chr2L 3819112 3819159 13 100 3.0 0.5 1.8 4.6 149 chr2L 3819010 intergenic CR44077 + chr2L 3819084 intergenic not near genes chr2L 3819159 intergenic not near genes chr2L_13_3815001 chr2L_3815001 RAL-392 82 chr2L 3819604 3819627 chr2L 3819700 3819722 13 95 2.5 8.5 5.5 2.0 118 chr2L 3819604 intergenic not near genes chr2L 3819663 intergenic not near genes chr2L 3819722 intergenic not near genes chr2L_13_3815001 chr2L_3815001 RAL-392 83 chr2L 3891874 3891926 chr2L 3891979 3892000 6 91 2.5 4.5 3.5 1.3 126 chr2L 3891874 intron capu - chr2L 3891937 intron capu - chr2L 3892000 intron capu - chr2L_6_3890001 chr2L_3890001 RAL-392 84 chr2L 3947090 3947124 chr2L 3947434 3947435 4 328 5.0 3.5 4.2 0.8 345 chr2L 3947090 intron fred - chr2L 3947262 intron fred - chr2L 3947435 intron fred - chr2L_4_3945001 chr2L_3945001 RAL-392 85 chr2L 4037780 4037807 chr2L 4037887 4037914 10 107 5.0 0.5 2.8 2.6 134 chr2L 4037780 intron ed + chr2L 4037847 intron ed + chr2L 4037914 intron ed + chr2L_10_4035001 chr2L_4035001 RAL-392 86 chr2L 4066039 4066049 chr2L 4068862 4068889 Juan 4 2832 2.5 2.5 2.5 1.1 2850 chr2L 4066039 intron ed + chr2L 4067464 intron ed + chr2L 4068889 intron ed + chr2L_4_4065001 chr2L_4065001 RAL-392 87 chr2L 4181293 4181300 chr2L 4183904 4183952 Burdock 6 2640 2.0 3.0 2.5 1.7 2659 chr2L 4181293 intergenic not near genes chr2L 4182622 intergenic not near genes chr2L 4183952 intergenic not near genes chr2L_6_4180001 chr2L_4180001 RAL-392 88 chr2L 4184469 4184507 chr2L 4184807 4184846 4 339 0.0 5.5 2.8 1.1 377 chr2L 4184469 intergenic not near genes chr2L 4184658 intergenic not near genes chr2L 4184846 intergenic not near genes chr2L_4_4180001 chr2L_4180001 RAL-392 89 chr2L 4326841 4326854 chr2L 4326949 4326962 4 105 6.0 3.5 4.8 0.7 121 chr2L 4326841 intron CG16857 + chr2L 4326902 intron CG16857 + chr2L 4326962 intron CG16857 + chr2L_4_4325001 chr2L_4325001 RAL-392 90 chr2L 4434513 4434551 chr2L 4434640 4434682 5 132 0.5 6.5 3.5 1.1 169 chr2L 4434513 intron,3` UTR,exon CG15431 -,CG34177 +,CG34178 + chr2L 4434598 intron,intron,intron CG15431 -,CG34177 +,CG34178 + chr2L 4434682 intron,3` UTR,exon CG15431 -,CG34177 +,CG34178 + chr2L_5_4430001 chr2L_4430001 RAL-392 91 chr2L 4571837 4571891 chr2L 4571942 4571979 7 99 2.0 1.0 1.5 2.8 142 chr2L 4571837 intron dp - chr2L 4571908 intron dp - chr2L 4571979 intron dp - chr2L_7_4570001 chr2L_4570001 RAL-392 92 chr2L 4576626 4576640 chr2L 4576858 4576899 8 245 0.5 4.5 2.5 2.3 273 chr2L 4576626 intron dp - chr2L 4576762 intron dp - chr2L 4576899 intron dp - chr2L_8_4575001 chr2L_4575001 RAL-392 93 chr2L 4601702 4601736 chr2L 4609143 4609174 mdg1 12 7449 3.0 4.5 3.8 2.5 7472 chr2L 4601702 intron dp - chr2L 4605438 intron dp - chr2L 4609174 intron dp - chr2L_12_4605001 chr2L_4605001 RAL-392 94 chr2L 4661832 4661853 chr2L 4669423 4669423 opus 4 7590 7.0 6.5 6.8 0.5 7591 chr2L 4661832 intergenic not near genes chr2L 4665628 intergenic not near genes chr2L 4669423 intergenic not near genes chr2L_4_4665001 chr2L_4665001 RAL-392 95 chr2L 4695002 4695048 chr2L 4695113 4695157 15 110 7.5 2.5 5.0 2.5 155 chr2L 4695002 intron CG34351 + chr2L 4695080 intron CG34351 + chr2L 4695157 intron CG34351 + chr2L_15_4695001 chr2L_4695001 RAL-392 96 chr2L 4793288 4793322 chr2L 4793603 4793637 4 315 2.0 3.0 2.5 1.1 349 chr2L 4793288 intron CG15630 - chr2L 4793462 intron CG15630 - chr2L 4793637 exon CG15630 - chr2L_4_4790001 chr2L_4790001 RAL-392 97 chr2L 4803866 4803913 chr2L 4803970 4804008 19 99 3.0 4.5 3.8 4.0 142 chr2L 4803866 intergenic not near genes chr2L 4803937 intergenic not near genes chr2L 4804008 intergenic not near genes chr2L_19_4800001 chr2L_4800001 RAL-392 98 chr2L 4819510 4819517 chr2L 4819639 4819660 4 140 5.5 7.5 6.5 0.5 150 chr2L 4819510 intergenic not near genes chr2L 4819585 intergenic not near genes chr2L 4819660 intergenic not near genes chr2L_4_4815001 chr2L_4815001 RAL-392 99 chr2L 4867735 4867902 chr2L 4867890 4868000 5 141 7.0 5.0 6.0 0.7 265 chr2L 4867735 intron pog + chr2L 4867868 intron pog + chr2L 4868000 intron pog + chr2L_5_4865001 chr2L_4865001 RAL-392 100 chr2L 4869452 4869497 chr2L 4869547 4869597 16 97 1.5 2.0 1.8 5.7 145 chr2L 4869452 intron pog + chr2L 4869524 intron pog + chr2L 4869597 intron pog + chr2L_16_4865001 chr2L_4865001 RAL-392 101 chr2L 4894278 4894308 chr2L 4894415 4894436 4 129 0.5 7.5 4.0 0.8 158 chr2L 4894278 intron CG3036 + chr2L 4894357 intron CG3036 + chr2L 4894436 intron CG3036 + chr2L_4_4890001 chr2L_4890001 RAL-392 102 chr2L 4894309 4894315 chr2L 4894412 4894453 4 116 0.5 6.5 3.5 0.9 144 chr2L 4894309 intron CG3036 + chr2L 4894381 intron CG3036 + chr2L 4894453 intron CG3036 + chr2L_4_4890001 chr2L_4890001 RAL-392 103 chr2L 4896427 4896480 chr2L 4896539 4896582 21 107 2.5 3.5 3.0 5.2 155 chr2L 4896427 intron CG3036 + chr2L 4896504 intron CG3036 + chr2L 4896582 intron CG3036 + chr2L_21_4895001 chr2L_4895001 RAL-392 104 chr2L 4918192 4918195 chr2L 4923323 4923326 jockey 4 5131 0.0 1.0 0.5 2.7 5134 chr2L 4918192 intron hoe1 - chr2L 4920759 intron hoe1 - chr2L 4923326 intron hoe1 - chr2L_4_4920001 chr2L_4920001 RAL-392 105 chr2L 4953531 4953543 chr2L 4953763 4953769 pogo 6 233 1.5 5.0 3.2 1.4 238 chr2L 4953531 intergenic Jon25Bii - chr2L 4953650 intergenic not near genes chr2L 4953769 intergenic not near genes chr2L_6_4950001 chr2L_4950001 RAL-392 106 chr2L 5092393 5092444 chr2L 5092500 5092551 18 104 4.0 5.0 4.5 3.3 158 chr2L 5092393 intron pgant5 - chr2L 5092472 intron pgant5 - chr2L 5092551 intron pgant5 - chr2L_18_5090001 chr2L_5090001 RAL-392 107 chr2L 5117277 5117321 chr2L 5117379 5117423 32 93 8.0 2.5 5.2 5.2 146 chr2L 5117277 intron Msp300 + chr2L 5117350 intron Msp300 + chr2L 5117423 intron Msp300 + chr2L_32_5115001 chr2L_5115001 RAL-392 108 chr2L 5120968 5121003 chr2L 5121074 5121088 7 101 4.0 4.0 4.0 1.4 120 chr2L 5120968 intron Msp300 + chr2L 5121028 intron Msp300 + chr2L 5121088 intron Msp300 + chr2L_7_5120001 chr2L_5120001 RAL-392 109 chr2L 5215240 5215286 chr2L 5215348 5215392 9 102 1.5 5.0 3.2 2.1 152 chr2L 5215240 3` UTR CG14034 - chr2L 5215316 exon CG14034 - chr2L 5215392 exon CG14034 - chr2L_9_5215001 chr2L_5215001 RAL-392 110 chr2L 5240993 5241001 chr2L 5241089 5241090 4 95 0.0 1.5 0.8 2.2 97 chr2L 5240993 intron tkv - chr2L 5241042 intron tkv - chr2L 5241090 intron tkv - chr2L_4_5240001 chr2L_5240001 RAL-392 111 chr2L 5342751 5342799 chr2L 5345151 5345199 Doc 20 2395 5.0 3.5 4.2 3.8 2448 chr2L 5342751 intergenic not near genes chr2L 5343975 intergenic not near genes chr2L 5345199 intergenic not near genes chr2L_20_5340001 chr2L_5340001 RAL-392 112 chr2L 5403161 5403168 chr2L 5403268 5403281 4 112 4.5 0.0 2.2 1.2 120 chr2L 5403161 intergenic not near genes chr2L 5403221 intergenic not near genes chr2L 5403281 intergenic not near genes chr2L_4_5400001 chr2L_5400001 RAL-392 113 chr2L 5475156 5475164 chr2L 5475261 5475289 6 116 2.0 1.5 1.8 2.1 133 chr2L 5475156 intergenic not near genes chr2L 5475222 intergenic not near genes chr2L 5475289 intergenic not near genes chr2L_6_5475001 chr2L_5475001 RAL-392 114 chr2L 5476202 5476228 chr2L 5476298 5476321 10 95 3.5 5.5 4.5 1.8 119 chr2L 5476202 intergenic not near genes chr2L 5476262 intergenic not near genes chr2L 5476321 intergenic not near genes chr2L_10_5475001 chr2L_5475001 RAL-392 115 chr2L 5488017 5488032 chr2L 5488096 5488132 5 88 4.5 0.5 2.5 1.4 115 chr2L 5488017 intergenic not near genes chr2L 5488074 intergenic not near genes chr2L 5488132 intergenic not near genes chr2L_5_5485001 chr2L_5485001 RAL-392 116 chr2L 3263438 3263438 chr2L 5508493 5508527 4 2245079 3.5 8.5 6.0 0.6 2245089 chr2L 3263438 intergenic not near genes chr2L 4385982 5` UTR CG3338 - chr2L 5508527 intergenic not near genes chr2L_4_4385001 chr2L_4385001 RAL-392 117 chr2L 5511315 5511353 chr2L 5511415 5511456 12 100 8.0 4.5 6.2 1.7 141 chr2L 5511315 intergenic not near genes chr2L 5511386 intergenic not near genes chr2L 5511456 intergenic not near genes chr2L_12_5510001 chr2L_5510001 RAL-392 118 chr2L 5563667 5563694 chr2L 5563771 5563798 14 104 3.5 2.5 3.0 3.5 131 chr2L 5563667 intergenic GluRIIB + chr2L 5563732 intergenic GluRIIB + chr2L 5563798 intergenic GluRIIB + chr2L_14_5560001 chr2L_5560001 RAL-392 119 chr2L 5592391 5592394 chr2L 5592490 5592494 4 100 0.0 6.0 3.0 1.0 103 chr2L 5592391 intergenic not near genes chr2L 5592442 intergenic not near genes chr2L 5592494 intergenic not near genes chr2L_4_5590001 chr2L_5590001 RAL-392 120 chr2L 5686439 5686445 chr2L 5686541 5686547 5 102 4.5 7.0 5.8 0.7 108 chr2L 5686439 intergenic not near genes chr2L 5686493 intergenic not near genes chr2L 5686547 intergenic not near genes chr2L_5_5685001 chr2L_5685001 RAL-392 121 chr2L 5695841 5695892 chr2L 5695953 5696004 23 103 8.5 6.0 7.2 2.8 163 chr2L 5695841 intergenic not near genes chr2L 5695922 intergenic not near genes chr2L 5696004 intergenic not near genes chr2L_23_5695001 chr2L_5695001 RAL-392 122 chr2L 5733578 5733617 chr2L 5733875 5733909 12 291 4.5 11.0 7.8 1.4 331 chr2L 5733578 intron CG11030 + chr2L 5733744 intron,3` UTR CG11030 +,CG11147 - chr2L 5733909 intron,3` UTR CG11030 +,CG11147 - chr2L_12_5730001 chr2L_5730001 RAL-392 123 chr2L 5777192 5777209 chr2L 5777301 5777308 5 104 10.5 8.0 9.2 0.5 116 chr2L 5777192 intron CG9171 - chr2L 5777250 intron CG9171 - chr2L 5777308 intron CG9171 - chr2L_5_5775001 chr2L_5775001 RAL-392 124 chr2L 5777213 5777240 chr2L 5777297 5777337 11 98 6.0 7.0 6.5 1.5 124 chr2L 5777213 intron CG9171 - chr2L 5777275 intron CG9171 - chr2L 5777337 intron CG9171 - chr2L_11_5775001 chr2L_5775001 RAL-392 125 chr2L 5819669 5819705 chr2L 5819757 5819809 15 98 2.5 3.5 3.0 3.8 140 chr2L 5819669 intergenic not near genes chr2L 5819739 intergenic not near genes chr2L 5819809 intergenic not near genes chr2L_15_5815001 chr2L_5815001 RAL-392 126 chr2L 5820377 5820426 chr2L 5820553 5820602 22 164 2.5 2.5 2.5 6.3 225 chr2L 5820377 intergenic not near genes chr2L 5820490 intergenic not near genes chr2L 5820602 intergenic not near genes chr2L_22_5820001 chr2L_5820001 RAL-392 127 chr2L 5842311 5842317 chr2L 5842392 5842420 4 98 6.0 0.0 3.0 1.0 109 chr2L 5842311 intron TrissinR + chr2L 5842366 intron TrissinR + chr2L 5842420 intron TrissinR + chr2L_4_5840001 chr2L_5840001 RAL-392 128 chr2L 5904443 5904453 chr2L 5904543 5904553 4 100 2.0 0.0 1.0 2.0 110 chr2L 5904443 exon CG9021 - chr2L 5904498 intron CG9021 - chr2L 5904553 intron CG9021 - chr2L_4_5900001 chr2L_5900001 RAL-392 129 chr2L 5904460 5904472 chr2L 5904540 5904572 8 96 0.5 0.0 0.2 6.7 112 chr2L 5904460 intron CG9021 - chr2L 5904516 intron CG9021 - chr2L 5904572 intron CG9021 - chr2L_8_5900001 chr2L_5900001 RAL-392 130 chr2L 5935988 5936023 chr2L 5936092 5936131 5 103 5.0 0.5 2.8 1.3 143 chr2L 5935988 intron dsf + chr2L 5936060 intron dsf + chr2L 5936131 intron dsf + chr2L_5_5935001 chr2L_5935001 RAL-392 131 chr2L 5942006 5942050 chr2L 5942118 5942162 6 105 5.5 3.0 4.2 1.2 156 chr2L 5942006 5` UTR CR45289 + chr2L 5942084 5` UTR CR45289 + chr2L 5942162 5` UTR CR45289 + chr2L_6_5940001 chr2L_5940001 RAL-392 132 chr2L 5962249 5962292 chr2L 5962345 5962388 9 95 7.0 6.0 6.5 1.2 139 chr2L 5962249 intergenic not near genes chr2L 5962318 intergenic not near genes chr2L 5962388 intergenic not near genes chr2L_9_5960001 chr2L_5960001 RAL-392 133 chr2L 6007096 6007120 chr2L 6007186 6007203 4 90 1.0 2.0 1.5 1.6 107 chr2L 6007096 intergenic CG9098 -,Gal - chr2L 6007150 intergenic CG9098 -,Gal - chr2L 6007203 intergenic CG9098 -,Gal - chr2L_4_6005001 chr2L_6005001 RAL-392 134 chr2L 6050442 6050461 chr2L 6050545 6050565 7 112 9.0 3.5 6.2 1.0 123 chr2L 6050442 intergenic CG12393 +,CG9135 + chr2L 6050504 intergenic CG12393 +,CG9135 + chr2L 6050565 intergenic CG12393 +,CG9135 + chr2L_7_6050001 chr2L_6050001 RAL-392 135 chr2L 6130750 6130795 chr2L 6130854 6130898 12 102 2.5 0.0 1.2 5.5 148 chr2L 6130750 intergenic CG42730 -,tectonic -,CG9222 + chr2L 6130824 intergenic CG42730 -,tectonic -,CG9222 + chr2L 6130898 intergenic CG9222 +,CG42730 -,tectonic - chr2L_12_6130001 chr2L_6130001 RAL-392 136 chr2L 6185449 6185470 chr2L 6185517 6185543 7 66 4.0 4.0 4.0 1.4 94 chr2L 6185449 intron CG34380 + chr2L 6185496 intron CG34380 + chr2L 6185543 intron CG34380 + chr2L_7_6185001 chr2L_6185001 RAL-392 137 chr2L 6201472 6201522 chr2L 6201569 6201600 14 87 2.5 3.5 3.0 3.5 128 chr2L 6201472 intron CG34380 + chr2L 6201536 intron CG34380 + chr2L 6201600 intron CG34380 + chr2L_14_6200001 chr2L_6200001 RAL-392 138 chr2L 6253598 6253616 chr2L 6253694 6253712 5 96 10.5 4.0 7.2 0.6 114 chr2L 6253598 intron Ddr + chr2L 6253655 intron Ddr + chr2L 6253712 intron Ddr + chr2L_5_6250001 chr2L_6250001 RAL-392 139 chr2L 6279623 6279628 chr2L 6279722 6279727 INE-1 4 99 9.5 1.5 5.5 0.6 104 chr2L 6279623 intron Ddr + chr2L 6279675 intron Ddr + chr2L 6279727 intron Ddr + chr2L_4_6275001 chr2L_6275001 RAL-392 140 chr2L 6279631 6279646 chr2L 6279720 6279742 INE-1 7 97 6.5 1.5 4.0 1.4 111 chr2L 6279631 intron Ddr + chr2L 6279686 intron Ddr + chr2L 6279742 intron Ddr + chr2L_7_6275001 chr2L_6275001 RAL-392 141 chr2L 6283944 6283979 chr2L 6284075 6284089 5 124 2.5 4.0 3.2 1.2 145 chr2L 6283944 intron Ddr + chr2L 6284016 intron Ddr + chr2L 6284089 intron Ddr + chr2L_5_6280001 chr2L_6280001 RAL-392 142 chr2L 6308301 6308320 chr2L 6308404 6308418 6 102 7.5 6.0 6.8 0.8 117 chr2L 6308301 intron Ddr + chr2L 6308360 intron Ddr + chr2L 6308418 intron,3` UTR Ddr +,CG43922 - chr2L_6_6305001 chr2L_6305001 RAL-392 143 chr2L 6308322 6308335 chr2L 6308402 6308437 4 92 4.0 5.5 4.8 0.7 115 chr2L 6308322 intron Ddr + chr2L 6308380 intron,3` UTR Ddr +,CG43922 - chr2L 6308437 intron,3` UTR Ddr +,CG43922 - chr2L_4_6305001 chr2L_6305001 RAL-392 144 chr2L 6363033 6363067 chr2L 6363133 6363167 5 100 9.5 3.0 6.2 0.7 134 chr2L 6363033 intergenic not near genes chr2L 6363100 intergenic not near genes chr2L 6363167 intergenic not near genes chr2L_5_6360001 chr2L_6360001 RAL-392 145 chr2L 6363155 6363175 chr2L 6366076 6366093 Burdock 10 2930 5.0 2.0 3.5 2.2 2938 chr2L 6363155 intergenic not near genes chr2L 6364624 intergenic not near genes chr2L 6366093 intergenic not near genes chr2L_10_6360001 chr2L_6360001 RAL-392 146 chr2L 6426837 6426887 chr2L 6445117 6445152 roo 12 18271 5.5 5.0 5.2 1.9 18315 chr2L 6426837 3` UTR CG9527 - chr2L 6435994 intron CG9527 - chr2L 6445152 exon CG9527 - chr2L_12_6435001 chr2L_6435001 RAL-392 147 chr2L 6544355 6544376 chr2L 6544467 6544488 13 112 8.5 6.5 7.5 1.5 133 chr2L 6544355 intron eya - chr2L 6544422 intron eya - chr2L 6544488 intron eya - chr2L_13_6540001 chr2L_6540001 RAL-392 148 chr2L 6544377 6544394 chr2L 6544463 6544506 10 103 5.0 6.0 5.5 1.5 129 chr2L 6544377 intron eya - chr2L 6544442 intron eya - chr2L 6544506 intron eya - chr2L_10_6540001 chr2L_6540001 RAL-392 149 chr2L 6598097 6598149 chr2L 6599074 6599112 8 967 2.0 4.0 3.0 2.0 1015 chr2L 6598097 intron CG11319 - chr2L 6598604 intron CG11319 - chr2L 6599112 intron CG11319 - chr2L_8_6595001 chr2L_6595001 RAL-392 150 chr2L 6626875 6626920 chr2L 6626969 6627003 13 95 6.5 2.5 4.5 2.4 128 chr2L 6626875 intron Oatp26F - chr2L 6626939 intron Oatp26F - chr2L 6627003 intron Oatp26F - chr2L_13_6625001 chr2L_6625001 RAL-392 151 chr2L 6740745 6740755 chr2L 6740842 6740856 5 100 0.0 8.0 4.0 1.0 111 chr2L 6740745 intergenic not near genes chr2L 6740800 intergenic not near genes chr2L 6740856 intergenic not near genes chr2L_5_6740001 chr2L_6740001 RAL-392 152 chr2L 6799521 6799572 chr2L 6799629 6799654 8 102 2.0 0.5 1.2 3.6 133 chr2L 6799521 5` UTR CR43610 + chr2L 6799588 5` UTR CR43610 + chr2L 6799654 intergenic CR43610 +,CG17376 - chr2L_8_6795001 chr2L_6795001 RAL-392 153 chr2L 6850358 6850405 chr2L 6850461 6850502 17 101 7.0 1.5 4.2 3.3 144 chr2L 6850358 intergenic not near genes chr2L 6850430 intergenic not near genes chr2L 6850502 intergenic not near genes chr2L_17_6850001 chr2L_6850001 RAL-392 154 chr2L 6872610 6872638 chr2L 6872710 6872716 6 89 4.0 5.5 4.8 1.0 106 chr2L 6872610 intergenic CR44915 -,CR44914 + chr2L 6872663 intergenic CR44914 +,CR44915 - chr2L 6872716 5` UTR CR44914 + chr2L_6_6870001 chr2L_6870001 RAL-392 155 chr2L 6872640 6872644 chr2L 6872703 6872732 4 83 1.5 4.0 2.8 1.1 92 chr2L 6872640 intergenic CR44914 +,CR44915 - chr2L 6872686 intergenic CR44914 +,CR44915 - chr2L 6872732 5` UTR CR44914 + chr2L_4_6870001 chr2L_6870001 RAL-392 156 chr2L 6887477 6887528 chr2L 6887647 6887700 6 165 4.5 0.0 2.2 1.9 223 chr2L 6887477 intron Nlg2 + chr2L 6887588 intron Nlg2 + chr2L 6887700 intron Nlg2 + chr2L_6_6885001 chr2L_6885001 RAL-392 157 chr2L 7081687 7081723 chr2L 7081788 7081824 11 100 6.0 3.5 4.8 1.9 137 chr2L 7081687 intron Pvf2 - chr2L 7081756 intron Pvf2 - chr2L 7081824 intron Pvf2 - chr2L_11_7080001 chr2L_7080001 RAL-392 158 chr2L 7088886 7088894 chr2L 7089085 7089096 5 213 0.0 0.5 0.2 4.2 210 chr2L 7088886 intergenic not near genes chr2L 7088991 intergenic not near genes chr2L 7089096 intergenic not near genes chr2L_5_7085001 chr2L_7085001 RAL-392 159 chr2L 7125779 7125801 chr2L 7125911 7125915 9 127 3.0 2.0 2.5 2.6 136 chr2L 7125779 intron Pvf3 - chr2L 7125847 intron Pvf3 - chr2L 7125915 intron Pvf3 - chr2L_9_7125001 chr2L_7125001 RAL-392 160 chr2L 7126842 7126878 chr2L 7126941 7126977 20 98 6.5 0.0 3.2 4.8 135 chr2L 7126842 intron Pvf3 - chr2L 7126910 intron Pvf3 - chr2L 7126977 intron Pvf3 - chr2L_20_7125001 chr2L_7125001 RAL-392 161 chr2L 7244701 7244754 chr2L 7244846 7244890 15 140 3.0 5.0 4.0 3.0 189 chr2L 7244701 intron Ndae1 - chr2L 7244796 intron Ndae1 - chr2L 7244890 intron Ndae1 - chr2L_15_7240001 chr2L_7240001 RAL-392 162 chr2L 7295994 7296025 chr2L 7296137 7296174 7 152 6.0 2.5 4.2 1.3 180 chr2L 7295994 intergenic not near genes chr2L 7296084 intergenic not near genes chr2L 7296174 intergenic not near genes chr2L_7_7295001 chr2L_7295001 RAL-392 163 chr2L 7301294 7301327 chr2L 7301381 7301430 8 88 0.5 1.5 1.0 4.0 136 chr2L 7301294 intergenic not near genes chr2L 7301362 intergenic not near genes chr2L 7301430 intergenic not near genes chr2L_8_7300001 chr2L_7300001 RAL-392 164 chr2L 7335189 7335233 chr2L 7335305 7335350 11 116 4.5 6.5 5.5 1.7 161 chr2L 7335189 intron Wnt6 + chr2L 7335270 intron Wnt6 + chr2L 7335350 intron Wnt6 + chr2L_11_7335001 chr2L_7335001 RAL-392 165 chr2L 7343325 7343353 chr2L 7350439 7350453 roo 8 7118 0.5 2.5 1.5 3.2 7128 chr2L 7343325 intron Wnt6 + chr2L 7346889 intron Wnt6 + chr2L 7350453 intron Wnt6 + chr2L_8_7345001 chr2L_7345001 RAL-392 166 chr2L 7406924 7406974 chr2L 7407051 7407053 5 107 0.0 0.5 0.2 4.2 129 chr2L 7406924 intron CG5177 + chr2L 7406988 intron CG5177 + chr2L 7407053 intron CG5177 + chr2L_5_7405001 chr2L_7405001 RAL-392 167 chr2L 7435858 7435910 chr2L 7435955 7435984 22 89 4.0 6.0 5.0 3.7 126 chr2L 7435858 intergenic not near genes chr2L 7435921 intergenic not near genes chr2L 7435984 intergenic not near genes chr2L_22_7435001 chr2L_7435001 RAL-392 168 chr2L 7436188 7436214 chr2L 7436291 7436324 9 101 3.5 4.0 3.8 1.9 136 chr2L 7436188 intergenic not near genes chr2L 7436256 intergenic not near genes chr2L 7436324 intergenic not near genes chr2L_9_7435001 chr2L_7435001 RAL-392 169 chr2L 7489593 7489605 chr2L 7489718 7489726 7 125 0.5 0.0 0.2 5.8 133 chr2L 7489593 intron Ziz - chr2L 7489660 intron Ziz - chr2L 7489726 intron Ziz - chr2L_7_7485001 chr2L_7485001 RAL-392 170 chr2L 7493390 7493415 chr2L 7493496 7493521 6 105 0.0 5.0 2.5 1.7 131 chr2L 7493390 intron Ziz - chr2L 7493456 intron Ziz - chr2L 7493521 intron Ziz - chr2L_6_7490001 chr2L_7490001 RAL-392 171 chr2L 7502720 7502770 chr2L 7502811 7502856 15 80 4.0 9.5 6.8 1.9 136 chr2L 7502720 intron RapGAP1 - chr2L 7502788 intron RapGAP1 - chr2L 7502856 intron RapGAP1 - chr2L_15_7500001 chr2L_7500001 RAL-392 172 chr2L 7510224 7510242 chr2L 7510351 7510375 4 136 4.0 3.0 3.5 0.9 151 chr2L 7510224 intron RapGAP1 - chr2L 7510300 intron RapGAP1 - chr2L 7510375 intron RapGAP1 - chr2L_4_7510001 chr2L_7510001 RAL-392 173 chr2L 7567945 7567958 chr2L 7568019 7568049 5 87 2.5 1.5 2.0 1.7 104 chr2L 7567945 intron RapGAP1 - chr2L 7567997 intron RapGAP1 - chr2L 7568049 intron RapGAP1 - chr2L_5_7565001 chr2L_7565001 RAL-392 174 chr2L 7579203 7579224 chr2L 7579392 7579434 BS 5 203 4.5 2.0 3.2 1.2 231 chr2L 7579203 intergenic RapGAP1 - chr2L 7579318 intergenic RapGAP1 - chr2L 7579434 intergenic RapGAP1 - chr2L_5_7575001 chr2L_7575001 RAL-392 175 chr2L 7629155 7629190 chr2L 7629252 7629257 5 83 2.0 1.0 1.5 2.0 102 chr2L 7629155 intergenic not near genes chr2L 7629206 intergenic not near genes chr2L 7629257 intergenic not near genes chr2L_5_7625001 chr2L_7625001 RAL-392 176 chr2L 7640410 7640422 chr2L 7640516 7640528 4 106 3.0 0.0 1.5 1.6 118 chr2L 7640410 intergenic not near genes chr2L 7640469 intergenic not near genes chr2L 7640528 intergenic not near genes chr2L_4_7640001 chr2L_7640001 RAL-392 177 chr2L 7657750 7657777 chr2L 7657848 7657868 5 93 5.5 3.0 4.2 1.0 118 chr2L 7657750 intron Slob - chr2L 7657809 intron Slob - chr2L 7657868 intron Slob - chr2L_5_7655001 chr2L_7655001 RAL-392 178 chr2L 7766639 7766645 chr2L 7766710 7766719 4 72 2.5 1.5 2.0 1.3 80 chr2L 7766639 intergenic not near genes chr2L 7766679 intergenic not near genes chr2L 7766719 intergenic not near genes chr2L_4_7765001 chr2L_7765001 RAL-392 179 chr2L 7778881 7778923 chr2L 7779038 7779065 20 155 6.0 8.0 7.0 2.5 184 chr2L 7778881 intergenic not near genes chr2L 7778973 intergenic not near genes chr2L 7779065 intergenic not near genes chr2L_20_7775001 chr2L_7775001 RAL-392 180 chr2L 7867551 7867601 chr2L 7867665 7867695 15 108 3.0 11.0 7.0 1.9 144 chr2L 7867551 intron Proc - chr2L 7867623 intron Proc - chr2L 7867695 intron Proc - chr2L_15_7865001 chr2L_7865001 RAL-392 181 chr2L 7959025 7959057 chr2L 7960456 7960483 pogo 8 1427 7.0 6.0 6.5 1.1 1458 chr2L 7959025 intron Snoo - chr2L 7959754 intron Snoo - chr2L 7960483 intron Snoo - chr2L_8_7955001 chr2L_7955001 RAL-392 182 chr2L 7973058 7973095 chr2L 7973219 7973255 8 157 3.5 5.5 4.5 1.5 197 chr2L 7973058 intron Snoo - chr2L 7973156 intron Snoo - chr2L 7973255 intron Snoo - chr2L_8_7970001 chr2L_7970001 RAL-392 183 chr2L 8018821 8018829 chr2L 8023625 8023633 Doc 5 4804 0.0 13.5 6.8 0.6 4812 chr2L 8018821 intron Tg + chr2L 8021227 intron Tg + chr2L 8023633 intron Tg + chr2L_5_8020001 chr2L_8020001 RAL-392 184 chr2L 8166036 8166067 chr2L 8166135 8166177 10 100 1.5 2.5 2.0 3.3 141 chr2L 8166036 intron Piezo + chr2L 8166106 intron Piezo + chr2L 8166177 intron Piezo + chr2L_10_8165001 chr2L_8165001 RAL-392 185 chr2L 8171280 8171290 chr2L 8171368 8171386 6 95 0.0 5.5 2.8 1.6 106 chr2L 8171280 intron Piezo + chr2L 8171333 intron Piezo + chr2L 8171386 intron Piezo + chr2L_6_8170001 chr2L_8170001 RAL-392 186 chr2L 8244738 8244744 chr2L 8244855 8244886 9 132 2.5 3.5 3.0 2.2 148 chr2L 8244738 intron CG8086 - chr2L 8244812 intron CG8086 - chr2L 8244886 intron CG8086 - chr2L_9_8240001 chr2L_8240001 RAL-392 187 chr2L 8281100 8281133 chr2L 8281197 8281230 15 90 1.0 5.5 3.2 3.6 130 chr2L 8281100 intron Btk29A - chr2L 8281165 intron Btk29A - chr2L 8281230 intron Btk29A - chr2L_15_8280001 chr2L_8280001 RAL-392 188 chr2L 8288690 8288701 chr2L 8288778 8288792 4 86 1.0 10.0 5.5 0.6 102 chr2L 8288690 intron Btk29A - chr2L 8288741 intron Btk29A - chr2L 8288792 intron Btk29A - chr2L_4_8285001 chr2L_8285001 RAL-392 189 chr2L 8452406 8452450 chr2L 8461592 8461641 roo 21 9187 3.5 13.0 8.2 2.3 9235 chr2L 8452406 intron fu12 - chr2L 8457024 intron fu12 - chr2L 8461641 intron fu12 - chr2L_21_8455001 chr2L_8455001 RAL-392 190 chr2L 8461830 8461877 chr2L 8461931 8461962 8 93 5.5 5.0 5.2 1.3 132 chr2L 8461830 intron fu12 - chr2L 8461896 intron fu12 - chr2L 8461962 intron fu12 - chr2L_8_8460001 chr2L_8460001 RAL-392 191 chr2L 8594476 8594495 chr2L 8601550 8601569 297 10 7073 1.0 0.0 0.5 6.7 7093 chr2L 8594476 intron,3` UTR Sema-1a +,CR43855 - chr2L 8598022 intron Sema-1a + chr2L 8601569 intron Sema-1a + chr2L_10_8595001 chr2L_8595001 RAL-392 192 chr2L 8723104 8723118 chr2L 8731501 8731515 Tirant 7 8397 4.5 5.5 5.0 1.2 8411 chr2L 8723104 intron raw - chr2L 8727310 intron raw - chr2L 8731515 intron raw - chr2L_7_8725001 chr2L_8725001 RAL-392 193 chr2L 8723120 8723145 chr2L 8731497 8731542 Tirant 11 8390 3.5 5.0 4.2 2.1 8422 chr2L 8723120 intron raw - chr2L 8727331 intron raw - chr2L 8731542 intron raw - chr2L_11_8725001 chr2L_8725001 RAL-392 194 chr2L 8786537 8786577 chr2L 8786644 8786674 5 102 2.0 7.5 4.8 0.9 137 chr2L 8786537 intergenic not near genes chr2L 8786606 intergenic not near genes chr2L 8786674 intergenic not near genes chr2L_5_8785001 chr2L_8785001 RAL-392 195 chr2L 8788760 8788784 chr2L 8788871 8788886 9 109 5.5 8.0 6.8 1.2 126 chr2L 8788760 intergenic not near genes chr2L 8788823 intergenic not near genes chr2L 8788886 intergenic not near genes chr2L_9_8785001 chr2L_8785001 RAL-392 196 chr2L 8799803 8799827 chr2L 8799917 8799938 6 120 6.5 3.5 5.0 1.0 135 chr2L 8799803 intergenic not near genes chr2L 8799870 intergenic not near genes chr2L 8799938 intergenic not near genes chr2L_6_8795001 chr2L_8795001 RAL-392 197 chr2L 8803172 8803209 chr2L 8803266 8803312 8 94 2.0 0.5 1.2 3.6 140 chr2L 8803172 intergenic not near genes chr2L 8803242 intergenic not near genes chr2L 8803312 intergenic not near genes chr2L_8_8800001 chr2L_8800001 RAL-392 198 chr2L 8874431 8874463 chr2L 8874521 8874550 7 93 2.5 1.0 1.8 2.5 119 chr2L 8874431 intergenic not near genes chr2L 8874490 intergenic not near genes chr2L 8874550 intergenic not near genes chr2L_7_8870001 chr2L_8870001 RAL-392 199 chr2L 8902432 8902484 chr2L 8902599 8902651 8 166 4.0 8.5 6.2 1.1 219 chr2L 8902432 intron CG34398 + chr2L 8902542 intron CG34398 + chr2L 8902651 intron CG34398 + chr2L_8_8900001 chr2L_8900001 RAL-392 200 chr2L 8956203 8956230 chr2L 8956300 8956327 10 93 3.5 3.5 3.5 2.2 124 chr2L 8956203 intron CG31886 - chr2L 8956265 intron CG31886 - chr2L 8956327 intron CG31886 - chr2L_10_8955001 chr2L_8955001 RAL-392 201 chr2L 9000268 9000312 chr2L 9007792 9007842 roo 5 7529 11.5 0.0 5.8 0.7 7574 chr2L 9000268 intergenic Try29F + chr2L 9004055 intergenic not near genes chr2L 9007842 intergenic not near genes chr2L_5_9000001 chr2L_9000001 RAL-392 202 chr2L 9039139 9039155 chr2L 9039236 9039252 4 97 0.5 2.5 1.5 1.6 113 chr2L 9039139 intergenic not near genes chr2L 9039196 intergenic not near genes chr2L 9039252 intergenic not near genes chr2L_4_9035001 chr2L_9035001 RAL-392 203 chr2L 9058840 9058847 chr2L 9058945 9058952 4 104 5.5 4.5 5.0 0.7 112 chr2L 9058840 intron CG31708 - chr2L 9058896 intron CG31708 - chr2L 9058952 intron CG31708 - chr2L_4_9055001 chr2L_9055001 RAL-392 204 chr2L 9069663 9069678 chr2L 9069774 9069789 5 110 0.5 0.0 0.2 4.2 126 chr2L 9069663 intron CG31708 - chr2L 9069726 intron CG31708 - chr2L 9069789 intron CG31708 - chr2L_5_9065001 chr2L_9065001 RAL-392 205 chr2L 9113781 9113807 chr2L 9113910 9113937 5 128 4.0 1.0 2.5 1.4 156 chr2L 9113781 intergenic Or30a + chr2L 9113859 intergenic not near genes chr2L 9113937 intergenic not near genes chr2L_5_9110001 chr2L_9110001 RAL-392 206 chr2L 9158771 9158819 chr2L 9158888 9158941 7 117 4.0 0.0 2.0 2.3 170 chr2L 9158771 intron CG32982 + chr2L 9158856 intron CG32982 + chr2L 9158941 intron CG32982 + chr2L_7_9155001 chr2L_9155001 RAL-392 207 chr2L 9193141 9193176 chr2L 9193225 9193234 7 72 2.0 8.5 5.2 1.1 93 chr2L 9193141 intron tai + chr2L 9193188 intron tai + chr2L 9193234 intron tai + chr2L_7_9190001 chr2L_9190001 RAL-392 208 chr2L 9196020 9196065 chr2L 9196112 9196155 16 94 8.5 8.0 8.2 1.7 135 chr2L 9196020 intron tai + chr2L 9196088 intron tai + chr2L 9196155 intron tai + chr2L_16_9195001 chr2L_9195001 RAL-392 209 chr2L 9211709 9211746 chr2L 9211849 9211882 13 122 4.5 4.0 4.2 2.5 173 chr2L 9211709 intron tai + chr2L 9211796 intron tai + chr2L 9211882 intron tai + chr2L_13_9210001 chr2L_9210001 RAL-392 210 chr2L 9264335 9264348 chr2L 9264445 9264468 7 118 8.5 3.0 5.8 1.0 133 chr2L 9264335 intron Ggamma30A + chr2L 9264402 intron Ggamma30A + chr2L 9264468 intron Ggamma30A + chr2L_7_9260001 chr2L_9260001 RAL-392 211 chr2L 9264355 9264378 chr2L 9264443 9264498 9 111 5.0 2.5 3.8 1.9 143 chr2L 9264355 intron Ggamma30A + chr2L 9264426 intron Ggamma30A + chr2L 9264498 intron Ggamma30A + chr2L_9_9260001 chr2L_9260001 RAL-392 212 chr2L 9277128 9277181 chr2L 9277242 9277243 9 95 5.5 2.0 3.8 1.9 115 chr2L 9277128 intron Ggamma30A + chr2L 9277186 intron Ggamma30A + chr2L 9277243 intron Ggamma30A + chr2L_9_9275001 chr2L_9275001 RAL-392 213 chr2L 9279978 9280021 chr2L 9280092 9280135 7 107 0.5 6.0 3.2 1.7 157 chr2L 9279978 intron Ggamma30A + chr2L 9280056 intron Ggamma30A + chr2L 9280135 intron Ggamma30A + chr2L_7_9280001 chr2L_9280001 RAL-392 214 chr2L 9297357 9297404 chr2L 9297454 9297501 22 94 4.5 8.5 6.5 2.9 144 chr2L 9297357 3` UTR Ggamma30A + chr2L 9297429 3` UTR Ggamma30A + chr2L 9297501 3` UTR Ggamma30A + chr2L_22_9295001 chr2L_9295001 RAL-392 215 chr2L 9304491 9304510 chr2L 9304590 9304603 4 96 7.5 5.5 6.5 0.5 112 chr2L 9304491 3` UTR CR42844 - chr2L 9304547 3` UTR CR42844 - chr2L 9304603 3` UTR CR42844 - chr2L_4_9300001 chr2L_9300001 RAL-392 216 chr2L 9337445 9337489 chr2L 9337546 9337567 18 97 4.5 5.5 5.0 3.0 122 chr2L 9337445 intron Eaat1 + chr2L 9337506 intron Eaat1 + chr2L 9337567 intron Eaat1 + chr2L_18_9335001 chr2L_9335001 RAL-392 217 chr2L 9364289 9364331 chr2L 9364406 9364443 4 111 0.0 4.0 2.0 1.3 154 chr2L 9364289 intergenic CR43404 + chr2L 9364366 intron CR43404 + chr2L 9364443 intron CR43404 + chr2L_4_9360001 chr2L_9360001 RAL-392 218 chr2L 9387235 9387276 chr2L 9387353 9387394 12 108 2.5 4.5 3.5 2.7 159 chr2L 9387235 intron Shawl - chr2L 9387314 intron Shawl - chr2L 9387394 intron,5` UTR Shawl -,Aldh + chr2L_12_9385001 chr2L_9385001 RAL-392 219 chr2L 9391575 9391610 chr2L 9391705 9391726 14 129 2.5 12.5 7.5 1.6 151 chr2L 9391575 intron Shawl - chr2L 9391650 intron Shawl - chr2L 9391726 intron Shawl - chr2L_14_9390001 chr2L_9390001 RAL-392 220 chr2L 9393491 9393530 chr2L 9396464 9396503 jockey 18 2982 2.5 5.5 4.0 3.6 3012 chr2L 9393491 intron Shawl - chr2L 9394997 intron Shawl - chr2L 9396503 intron Shawl - chr2L_18_9390001 chr2L_9390001 RAL-392 221 chr2L 9421322 9421367 chr2L 9421678 9421689 13 352 7.5 3.5 5.5 2.0 367 chr2L 9421322 intron Mco1 + chr2L 9421506 intron Mco1 + chr2L 9421689 intron Mco1 + chr2L_13_9420001 chr2L_9420001 RAL-392 222 chr2L 9448915 9448921 chr2L 9448990 9449028 4 99 0.0 2.0 1.0 2.0 113 chr2L 9448915 intron numb + chr2L 9448972 intron numb + chr2L 9449028 intron numb + chr2L_4_9445001 chr2L_9445001 RAL-392 223 chr2L 9454958 9454972 chr2L 9455080 9455094 6 122 7.0 0.5 3.8 1.2 136 chr2L 9454958 intron numb + chr2L 9455026 intron numb + chr2L 9455094 intron numb + chr2L_6_9455001 chr2L_9455001 RAL-392 224 chr2L 9454975 9455007 chr2L 9455079 9455131 13 112 1.5 0.5 1.0 6.5 156 chr2L 9454975 intron numb + chr2L 9455053 intron numb + chr2L 9455131 intron numb + chr2L_13_9455001 chr2L_9455001 RAL-392 225 chr2L 9464825 9464875 chr2L 9464937 9464957 22 105 5.5 5.0 5.2 3.5 132 chr2L 9464825 intergenic not near genes chr2L 9464891 intergenic not near genes chr2L 9464957 intergenic not near genes chr2L_22_9460001 chr2L_9460001 RAL-392 226 chr2L 9474761 9474810 chr2L 9474875 9474919 13 109 4.0 2.0 3.0 3.2 158 chr2L 9474761 intergenic not near genes chr2L 9474840 intergenic not near genes chr2L 9474919 intergenic not near genes chr2L_13_9470001 chr2L_9470001 RAL-392 227 chr2L 9543759 9543766 chr2L 9543856 9543863 7 97 1.0 0.5 0.8 3.9 104 chr2L 9543759 intergenic Cpr30B +,CG13113 + chr2L 9543811 intergenic Cpr30B +,CG13113 + chr2L 9543863 intergenic Cpr30B +,CG13113 + chr2L_7_9540001 chr2L_9540001 RAL-392 228 chr2L 9677752 9677806 chr2L 9678405 9678459 21 645 4.5 4.5 4.5 3.8 707 chr2L 9677752 intergenic not near genes chr2L 9678106 intergenic not near genes chr2L 9678459 intergenic not near genes chr2L_21_9675001 chr2L_9675001 RAL-392 229 chr2L 9683700 9683722 chr2L 9683797 9683818 8 95 4.0 7.0 5.5 1.2 118 chr2L 9683700 3` UTR Pka-C1 - chr2L 9683759 3` UTR Pka-C1 - chr2L 9683818 3` UTR Pka-C1 - chr2L_8_9680001 chr2L_9680001 RAL-392 230 chr2L 9716874 9716888 chr2L 9716960 9716961 6 88 5.5 9.0 7.2 0.7 87 chr2L 9716874 3` UTR Nckx30C - chr2L 9716918 3` UTR Nckx30C - chr2L 9716961 3` UTR Nckx30C - chr2L_6_9715001 chr2L_9715001 RAL-392 231 chr2L 9730964 9731006 chr2L 9731060 9731109 21 96 4.5 5.0 4.8 3.6 145 chr2L 9730964 intron Nckx30C - chr2L 9731036 intron Nckx30C - chr2L 9731109 intron Nckx30C - chr2L_21_9730001 chr2L_9730001 RAL-392 232 chr2L 9837437 9837445 chr2L 9837513 9837543 8 94 3.0 5.0 4.0 1.6 106 chr2L 9837437 intron nAChRalpha6 - chr2L 9837490 intron nAChRalpha6 - chr2L 9837543 intron nAChRalpha6 - chr2L_8_9835001 chr2L_9835001 RAL-392 233 chr2L 9862339 9862351 chr2L 9862457 9862479 5 126 0.0 10.0 5.0 0.8 140 chr2L 9862339 intron nAChRalpha6 - chr2L 9862409 intron nAChRalpha6 - chr2L 9862479 intron nAChRalpha6 - chr2L_5_9860001 chr2L_9860001 RAL-392 234 chr2L 9864390 9864425 chr2L 9864491 9864511 15 97 2.5 2.0 2.2 4.7 121 chr2L 9864390 intron nAChRalpha6 - chr2L 9864450 intron nAChRalpha6 - chr2L 9864511 intron nAChRalpha6 - chr2L_15_9860001 chr2L_9860001 RAL-392 235 chr2L 9892484 9892523 chr2L 9892580 9892619 10 94 6.0 5.0 5.5 1.5 135 chr2L 9892484 intron mtDNA-helicase - chr2L 9892552 intron mtDNA-helicase - chr2L 9892619 intron mtDNA-helicase - chr2L_10_9890001 chr2L_9890001 RAL-392 236 chr2L 9973734 9973756 chr2L 9980845 9980852 HMS-Beagle 11 7118 3.0 4.5 3.8 2.3 7118 chr2L 9973734 intergenic not near genes chr2L 9977293 intergenic not near genes chr2L 9980852 intergenic not near genes chr2L_11_9975001 chr2L_9975001 RAL-392 237 chr2L 9982198 9982209 chr2L 9982314 9982328 8 120 0.0 9.0 4.5 1.5 130 chr2L 9982198 intergenic not near genes chr2L 9982263 intergenic not near genes chr2L 9982328 intergenic not near genes chr2L_8_9980001 chr2L_9980001 RAL-392 238 chr2L 9982212 9982230 chr2L 9982305 9982353 12 117 0.0 6.0 3.0 3.0 141 chr2L 9982212 intergenic not near genes chr2L 9982282 intergenic not near genes chr2L 9982353 intergenic not near genes chr2L_12_9980001 chr2L_9980001 RAL-392 239 chr2L 10078114 10078158 chr2L 10078282 10078336 12 168 9.5 5.5 7.5 1.4 222 chr2L 10078114 intron CG44153 - chr2L 10078225 intron CG44153 - chr2L 10078336 intron CG44153 - chr2L_12_10075001 chr2L_10075001 RAL-392 240 chr2L 10138171 10138181 chr2L 10143435 10143445 Rt1c 5 5264 9.0 5.5 7.2 0.6 5274 chr2L 10138171 intron CG44153 - chr2L 10140808 intron CG44153 - chr2L 10143445 intron CG44153 - chr2L_5_10140001 chr2L_10140001 RAL-392 241 chr2L 10177897 10177915 chr2L 10177997 10178007 4 94 8.0 5.5 6.8 0.5 110 chr2L 10177897 intron CG44153 - chr2L 10177952 intron CG44153 - chr2L 10178007 intron CG44153 - chr2L_4_10175001 chr2L_10175001 RAL-392 242 chr2L 10209829 10209845 chr2L 10209926 10209929 5 94 7.5 0.0 3.8 1.0 100 chr2L 10209829 intergenic CG5727 -,CR44845 +,CG5731 - chr2L 10209879 3` UTR CG5727 - chr2L 10209929 3` UTR CG5727 - chr2L_5_10205001 chr2L_10205001 RAL-392 243 chr2L 10230526 10230563 chr2L 10230650 10230667 12 117 7.0 8.5 7.8 1.4 141 chr2L 10230526 intron CG5694 - chr2L 10230596 intron CG5694 - chr2L 10230667 intron CG5694 - chr2L_12_10230001 chr2L_10230001 RAL-392 244 chr2L 10258414 10258426 chr2L 10258519 10258531 6 105 2.5 6.5 4.5 1.1 117 chr2L 10258414 intron Pten - chr2L 10258472 intron Pten - chr2L 10258531 intron Pten - chr2L_6_10255001 chr2L_10255001 RAL-392 245 chr2L 10258429 10258440 chr2L 10258517 10258545 8 102 1.0 5.5 3.2 1.9 116 chr2L 10258429 intron Pten - chr2L 10258487 intron Pten - chr2L 10258545 intron Pten - chr2L_8_10255001 chr2L_10255001 RAL-392 246 chr2L 10281682 10281684 chr2L 10281795 10281810 4 121 0.5 9.0 4.8 0.7 128 chr2L 10281682 intergenic CG5604 - chr2L 10281746 intergenic CG5604 - chr2L 10281810 intergenic CG5604 - chr2L_4_10280001 chr2L_10280001 RAL-392 247 chr2L 10294658 10294690 chr2L 10294764 10294777 7 103 5.5 3.0 4.2 1.3 119 chr2L 10294658 intron Hand - chr2L 10294718 intron Hand - chr2L 10294777 intron Hand - chr2L_7_10290001 chr2L_10290001 RAL-392 248 chr2L 10447073 10447094 chr2L 10447184 10447224 12 125 0.0 1.0 0.5 8.0 151 chr2L 10447073 intron loh + chr2L 10447148 intron loh + chr2L 10447224 intron loh + chr2L_12_10445001 chr2L_10445001 RAL-392 249 chr2L 10495288 10495463 chr2L 10495385 10495569 23 98 0.0 1.5 0.8 12.8 281 chr2L 10495288 intron Myo31DF - chr2L 10495428 intron Myo31DF - chr2L 10495569 intron Myo31DF - chr2L_23_10495001 chr2L_10495001 RAL-392 250 chr2L 10515340 10515389 chr2L 10515453 10515465 22 109 6.0 7.5 6.8 2.8 125 chr2L 10515340 intron,intron CG45083 -,Fatp - chr2L 10515402 intron,intron CG45083 -,Fatp - chr2L 10515465 intron,intron CG45083 -,Fatp - chr2L_22_10515001 chr2L_10515001 RAL-392 251 chr2L 10572693 10572734 chr2L 10572780 10572835 22 95 6.0 4.5 5.2 3.5 142 chr2L 10572693 intron Trim9 + chr2L 10572764 intron Trim9 + chr2L 10572835 intron Trim9 + chr2L_22_10570001 chr2L_10570001 RAL-392 252 chr2L 10580770 10580809 chr2L 10580871 10580900 10 96 2.0 3.5 2.8 2.6 130 chr2L 10580770 intron Trim9 + chr2L 10580835 intron Trim9 + chr2L 10580900 intron Trim9 + chr2L_10_10580001 chr2L_10580001 RAL-392 253 chr2L 10592821 10592868 chr2L 10600502 10600550 opus 12 7674 0.5 5.0 2.8 3.2 7729 chr2L 10592821 intron Trim9 + chr2L 10596686 intron Trim9 + chr2L 10600550 intron Trim9 + chr2L_12_10595001 chr2L_10595001 RAL-392 254 chr2L 10685578 10685620 chr2L 10685681 10685723 9 98 2.0 3.5 2.8 2.4 145 chr2L 10685578 intergenic not near genes chr2L 10685650 intergenic CG7296 - chr2L 10685723 intergenic CG7296 - chr2L_9_10685001 chr2L_10685001 RAL-392 255 chr2L 10688520 10688568 chr2L 10688616 10688663 17 94 2.0 2.0 2.0 5.7 143 chr2L 10688520 intergenic CG7294 - chr2L 10688592 intergenic CG7294 - chr2L 10688663 intergenic CG7294 - chr2L_17_10685001 chr2L_10685001 RAL-392 256 chr2L 10703298 10703346 chr2L 10703403 10703440 18 101 3.5 6.0 4.8 3.1 142 chr2L 10703298 intron Lip2 - chr2L 10703369 intron Lip2 - chr2L 10703440 intron Lip2 - chr2L_18_10700001 chr2L_10700001 RAL-392 257 chr2L 10723517 10723549 chr2L 10723631 10723651 12 112 4.0 4.0 4.0 2.4 134 chr2L 10723517 intergenic not near genes chr2L 10723584 intergenic not near genes chr2L 10723651 intergenic not near genes chr2L_12_10720001 chr2L_10720001 RAL-392 258 chr2L 10770676 10770711 chr2L 10770765 10770793 8 92 4.5 3.5 4.0 1.6 117 chr2L 10770676 intergenic CG17127 + chr2L 10770734 intergenic CG17127 + chr2L 10770793 intergenic CG17127 + chr2L_8_10770001 chr2L_10770001 RAL-392 259 chr2L 10862867 10862876 chr2L 10864451 10864455 Rt1c 7 1595 2.5 2.5 2.5 2.0 1588 chr2L 10862867 3` UTR CR43807 - chr2L 10863661 intron CR43807 - chr2L 10864455 intron CR43807 - chr2L_7_10860001 chr2L_10860001 RAL-392 260 chr2L 10912969 10913000 chr2L 10913068 10913098 7 97 4.5 5.5 5.0 1.2 129 chr2L 10912969 intergenic not near genes chr2L 10913034 intergenic not near genes chr2L 10913098 intergenic not near genes chr2L_7_10910001 chr2L_10910001 RAL-392 261 chr2L 10946946 10946972 chr2L 10956170 10956191 roo 8 9224 2.5 6.0 4.2 1.5 9245 chr2L 10946946 intron dpr2 - chr2L 10951568 intron dpr2 - chr2L 10956191 intron dpr2 - chr2L_8_10950001 chr2L_10950001 RAL-392 262 chr2L 10987587 10987623 chr2L 10987697 10987725 11 107 1.5 2.5 2.0 3.7 138 chr2L 10987587 intergenic piwi -,CG12253 + chr2L 10987656 intergenic CG12253 +,piwi - chr2L 10987725 intergenic CG12253 +,piwi - chr2L_11_10985001 chr2L_10985001 RAL-392 263 chr2L 11292357 11292406 chr2L 11292459 11292499 18 98 8.5 17.0 12.8 1.3 142 chr2L 11292357 intergenic not near genes chr2L 11292428 intergenic not near genes chr2L 11292499 intergenic not near genes chr2L_18_11290001 chr2L_11290001 RAL-392 264 chr2L 11364495 11364508 chr2L 11364556 11364578 7 76 3.5 2.5 3.0 1.8 83 chr2L 11364495 intron salr + chr2L 11364536 intron salr + chr2L 11364578 intron salr + chr2L_7_11360001 chr2L_11360001 RAL-392 265 chr2L 11399519 11399533 chr2L 11399605 11399630 5 94 2.0 0.5 1.2 2.3 111 chr2L 11399519 intergenic not near genes chr2L 11399574 intergenic not near genes chr2L 11399630 intergenic not near genes chr2L_5_11395001 chr2L_11395001 RAL-392 266 chr2L 11404765 11404808 chr2L 11404861 11404873 17 89 3.5 2.5 3.0 4.2 108 chr2L 11404765 intergenic not near genes chr2L 11404819 intergenic not near genes chr2L 11404873 intergenic not near genes chr2L_17_11400001 chr2L_11400001 RAL-392 267 chr2L 11478672 11478697 chr2L 11478768 11478769 7 87 7.0 4.0 5.5 1.1 97 chr2L 11478672 intergenic not near genes chr2L 11478720 intergenic not near genes chr2L 11478769 intergenic not near genes chr2L_7_11475001 chr2L_11475001 RAL-392 268 chr2L 11496615 11496654 chr2L 11496713 11496752 9 94 0.5 4.0 2.2 2.8 137 chr2L 11496615 intergenic CG6488 - chr2L 11496684 intergenic CG6488 - chr2L 11496752 intergenic CG6488 - chr2L_9_11495001 chr2L_11495001 RAL-392 269 chr2L 11537740 11537785 chr2L 11537877 11537922 10 136 2.5 5.0 3.8 2.1 182 chr2L 11537740 intergenic not near genes chr2L 11537831 intergenic not near genes chr2L 11537922 intergenic not near genes chr2L_10_11535001 chr2L_11535001 RAL-392 270 chr2L 11540579 11540613 chr2L 11547990 11548035 Tabor 12 7420 7.5 7.0 7.2 1.5 7456 chr2L 11540579 intergenic not near genes chr2L 11544307 intergenic not near genes chr2L 11548035 intergenic not near genes chr2L_12_11540001 chr2L_11540001 RAL-392 271 chr2L 11555392 11555427 chr2L 11555532 11555566 8 138 3.5 1.0 2.2 2.5 174 chr2L 11555392 intergenic not near genes chr2L 11555479 intergenic not near genes chr2L 11555566 intergenic not near genes chr2L_8_11555001 chr2L_11555001 RAL-392 272 chr2L 11563647 11563669 chr2L 11568844 11568878 copia 6 5206 2.5 7.0 4.8 1.0 5231 chr2L 11563647 intergenic not near genes chr2L 11566262 intergenic not near genes chr2L 11568878 intergenic not near genes chr2L_6_11565001 chr2L_11565001 RAL-392 273 chr2L 11672124 11672166 chr2L 11672244 11672263 14 119 3.5 2.0 2.8 3.7 139 chr2L 11672124 intergenic not near genes chr2L 11672194 intergenic not near genes chr2L 11672263 intergenic not near genes chr2L_14_11670001 chr2L_11670001 RAL-392 274 chr2L 11684379 11684401 chr2L 11684631 11684637 6 246 4.5 4.5 4.5 1.1 258 chr2L 11684379 intergenic not near genes chr2L 11684508 intergenic not near genes chr2L 11684637 intergenic not near genes chr2L_6_11680001 chr2L_11680001 RAL-392 275 chr2L 11704618 11704666 chr2L 11704714 11704762 4 92 3.5 5.0 4.2 0.8 144 chr2L 11704618 intergenic not near genes chr2L 11704690 intergenic not near genes chr2L 11704762 intergenic not near genes chr2L_4_11700001 chr2L_11700001 RAL-392 276 chr2L 11713491 11713538 chr2L 11720979 11720995 blood 18 7475 3.0 3.5 3.2 4.3 7504 chr2L 11713491 intergenic not near genes chr2L 11717243 intergenic not near genes chr2L 11720995 intergenic CR44143 + chr2L_18_11715001 chr2L_11715001 RAL-392 277 chr2L 11750305 11750336 chr2L 11750611 11750642 11 304 4.5 3.0 3.8 2.3 337 chr2L 11750305 intergenic not near genes chr2L 11750474 intergenic not near genes chr2L 11750642 intergenic not near genes chr2L_11_11750001 chr2L_11750001 RAL-392 278 chr2L 11820427 11820464 chr2L 11820528 11820545 14 97 2.5 8.5 5.5 2.2 118 chr2L 11820427 intron Pde1c - chr2L 11820486 intron Pde1c - chr2L 11820545 intron Pde1c - chr2L_14_11820001 chr2L_11820001 RAL-392 279 chr2L 11828398 11828445 chr2L 11828512 11828548 7 107 0.5 7.5 4.0 1.4 150 chr2L 11828398 intron,intron Pde1c -,esc - chr2L 11828473 intron,intron Pde1c -,esc - chr2L 11828548 intron,intron Pde1c -,esc - chr2L_7_11825001 chr2L_11825001 RAL-392 280 chr2L 11841364 11841391 chr2L 11841446 11841489 12 90 1.5 2.5 2.0 4.0 125 chr2L 11841364 intron Pde1c - chr2L 11841426 intron Pde1c - chr2L 11841489 intron Pde1c - chr2L_12_11840001 chr2L_11840001 RAL-392 281 chr2L 11857271 11857310 chr2L 11857510 11857549 8 238 2.0 5.0 3.5 1.8 278 chr2L 11857271 intron Pde1c - chr2L 11857410 intron Pde1c - chr2L 11857549 intron Pde1c - chr2L_8_11855001 chr2L_11855001 RAL-392 282 chr2L 11862339 11862390 chr2L 11862452 11862503 19 110 4.5 5.0 4.8 3.3 164 chr2L 11862339 intron Pde1c - chr2L 11862421 intron Pde1c - chr2L 11862503 intron Pde1c - chr2L_19_11860001 chr2L_11860001 RAL-392 283 chr2L 11941716 11941746 chr2L 11941837 11941860 11 122 3.5 5.0 4.2 2.1 144 chr2L 11941716 intergenic not near genes chr2L 11941788 intergenic not near genes chr2L 11941860 intergenic not near genes chr2L_11_11940001 chr2L_11940001 RAL-392 284 chr2L 11951957 11951993 chr2L 11952060 11952096 15 103 5.5 4.0 4.8 2.6 139 chr2L 11951957 intergenic CR43314 - chr2L 11952026 intergenic CR43314 - chr2L 11952096 intergenic CR43314 - chr2L_15_11950001 chr2L_11950001 RAL-392 285 chr2L 12031379 12031418 chr2L 12031474 12031519 16 101 4.0 5.0 4.5 2.9 140 chr2L 12031379 intron dmGlut + chr2L 12031449 intron dmGlut + chr2L 12031519 intron dmGlut + chr2L_16_12030001 chr2L_12030001 RAL-392 286 chr2L 12046471 12046511 chr2L 12046563 12046607 7 88 2.5 5.5 4.0 1.4 136 chr2L 12046471 5` UTR CR44589 + chr2L 12046539 5` UTR CR44589 + chr2L 12046607 5` UTR CR44589 + chr2L_7_12045001 chr2L_12045001 RAL-392 287 chr2L 12067309 12067358 chr2L 12074381 12074430 297 20 7068 4.5 4.5 4.5 3.6 7121 chr2L 12067309 intergenic not near genes chr2L 12070870 intergenic not near genes chr2L 12074430 intergenic not near genes chr2L_20_12070001 chr2L_12070001 RAL-392 288 chr2L 12085640 12085671 chr2L 12085734 12085752 8 88 11.0 2.5 6.8 1.0 112 chr2L 12085640 5` UTR prd - chr2L 12085696 5` UTR,5` UTR prd -,CR44592 + chr2L 12085752 5` UTR,5` UTR prd -,CR44592 + chr2L_8_12085001 chr2L_12085001 RAL-392 289 chr2L 12132708 12132745 chr2L 12132814 12132837 14 104 0.0 3.0 1.5 5.6 129 chr2L 12132708 intron rho-6 - chr2L 12132772 intron rho-6 - chr2L 12132837 intron rho-6 - chr2L_14_12130001 chr2L_12130001 RAL-392 290 chr2L 12175832 12175845 chr2L 12175929 12175947 5 101 0.0 1.0 0.5 3.3 115 chr2L 12175832 intron,intron aret +,atilla - chr2L 12175890 intron,intron aret +,atilla - chr2L 12175947 intron,intron aret +,atilla - chr2L_5_12175001 chr2L_12175001 RAL-392 291 chr2L 12229556 12229597 chr2L 12229653 12229694 16 96 2.0 1.5 1.8 5.7 138 chr2L 12229556 intron aret + chr2L 12229625 intron aret + chr2L 12229694 intron aret + chr2L_16_12225001 chr2L_12225001 RAL-392 292 chr2L 12240138 12240187 chr2L 12240252 12240299 16 112 2.5 4.0 3.2 3.8 161 chr2L 12240138 intron aret + chr2L 12240218 intron aret + chr2L 12240299 intron aret + chr2L_16_12240001 chr2L_12240001 RAL-392 293 chr2L 12272141 12272195 chr2L 12272239 12272291 13 92 1.5 6.5 4.0 2.6 150 chr2L 12272141 intron aret + chr2L 12272216 intron aret + chr2L 12272291 intron aret + chr2L_13_12270001 chr2L_12270001 RAL-392 294 chr2L 12277265 12277310 chr2L 12277832 12277877 9 573 27.5 30.5 29.0 0.3 612 chr2L 12277265 intron aret + chr2L 12277571 intron aret + chr2L 12277877 intron aret + chr2L_9_12275001 chr2L_12275001 RAL-392 295 chr2L 12324335 12324348 chr2L 12324424 12324444 4 90 3.5 6.0 4.8 0.7 109 chr2L 12324335 intergenic not near genes chr2L 12324390 intergenic not near genes chr2L 12324444 intergenic not near genes chr2L_4_12320001 chr2L_12320001 RAL-392 296 chr2L 12366843 12366892 chr2L 12366949 12366998 16 105 3.5 4.0 3.8 3.3 155 chr2L 12366843 intron bru-2 + chr2L 12366920 intron bru-2 + chr2L 12366998 intron bru-2 + chr2L_16_12365001 chr2L_12365001 RAL-392 297 chr2L 12373085 12373085 chr2L 15974279 15974279 6 3601194 11.0 17.5 14.2 0.4 3601194 chr2L 12373085 intron bru-2 + chr2L 14173682 intron CG43333 - chr2L 15974279 intergenic not near genes chr2L_6_14170001 chr2L_14170001 RAL-392 298 chr2L 12409093 12409137 chr2L 12409201 12409214 20 100 3.5 8.5 6.0 2.9 121 chr2L 12409093 intron vir-1 - chr2L 12409154 intron vir-1 - chr2L 12409214 intron vir-1 - chr2L_20_12405001 chr2L_12405001 RAL-392 299 chr2L 12424346 12424380 chr2L 12424442 12424476 6 93 0.0 4.5 2.2 1.9 130 chr2L 12424346 intergenic not near genes chr2L 12424411 intergenic CG6405 + chr2L 12424476 intergenic CG6405 + chr2L_6_12420001 chr2L_12420001 RAL-392 300 chr2L 12426155 12426164 chr2L 12426213 12426225 8 74 4.5 5.5 5.0 1.3 70 chr2L 12426155 exon CG6405 + chr2L 12426190 exon CG6405 + chr2L 12426225 exon CG6405 + chr2L_8_12425001 chr2L_12425001 RAL-392 301 chr2L 12487868 12487892 chr2L 12487969 12487983 13 97 7.0 6.0 6.5 1.7 115 chr2L 12487868 intron bun - chr2L 12487926 intron bun - chr2L 12487983 intron bun - chr2L_13_12485001 chr2L_12485001 RAL-392 302 chr2L 12487894 12487919 chr2L 12487967 12488010 20 87 4.5 4.5 4.5 3.6 116 chr2L 12487894 intron bun - chr2L 12487952 intron bun - chr2L 12488010 intron bun - chr2L_20_12485001 chr2L_12485001 RAL-392 303 chr2L 12529212 12529263 chr2L 12529384 12529424 12 168 1.5 5.5 3.5 2.7 212 chr2L 12529212 intron bun - chr2L 12529318 intron bun - chr2L 12529424 intron bun - chr2L_12_12525001 chr2L_12525001 RAL-392 304 chr2L 12558309 12558321 chr2L 12565458 12565458 HMS-Beagle 4 7146 8.0 5.0 6.5 0.5 7149 chr2L 12558309 intergenic not near genes chr2L 12561884 intergenic not near genes chr2L 12565458 intergenic not near genes chr2L_4_12560001 chr2L_12560001 RAL-392 305 chr2L 12558322 12558353 chr2L 12565454 12565486 HMS-Beagle 5 7135 3.5 4.5 4.0 1.0 7164 chr2L 12558322 intergenic not near genes chr2L 12561904 intergenic not near genes chr2L 12565486 intergenic not near genes chr2L_5_12560001 chr2L_12560001 RAL-392 306 chr2L 12682859 12682898 chr2L 12682958 12682997 15 91 8.0 5.5 6.8 1.9 138 chr2L 12682859 intron pdm2 + chr2L 12682928 intron pdm2 + chr2L 12682997 intron pdm2 + chr2L_15_12680001 chr2L_12680001 RAL-392 307 chr2L 12731047 12731084 chr2L 12735826 12735871 F-element 11 4782 5.5 4.5 5.0 1.8 4824 chr2L 12731047 intron MRP + chr2L 12733459 intron MRP + chr2L 12735871 intron MRP + chr2L_11_12730001 chr2L_12730001 RAL-392 308 chr2L 12739171 12739197 chr2L 12743956 12743998 Doc 7 4796 2.5 2.0 2.2 2.2 4827 chr2L 12739171 exon MRP + chr2L 12741584 intron MRP + chr2L 12743998 exon MRP + chr2L_7_12740001 chr2L_12740001 RAL-392 309 chr2L 12751310 12751341 chr2L 12751411 12751444 9 100 1.0 6.0 3.5 2.0 134 chr2L 12751310 intergenic not near genes chr2L 12751377 intergenic not near genes chr2L 12751444 intergenic not near genes chr2L_9_12750001 chr2L_12750001 RAL-392 310 chr2L 12763806 12763873 chr2L 12764038 12764093 BS 7 224 0.5 0.0 0.2 5.8 287 chr2L 12763806 intergenic not near genes chr2L 12763950 intergenic not near genes chr2L 12764093 intergenic not near genes chr2L_7_12760001 chr2L_12760001 RAL-392 311 chr2L 12781783 12781810 chr2L 12789246 12789273 Quasimodo 9 7462 9.0 4.5 6.8 1.2 7490 chr2L 12781783 intergenic not near genes chr2L 12785528 intergenic not near genes chr2L 12789273 intergenic not near genes chr2L_9_12785001 chr2L_12785001 RAL-392 312 chr2L 12791600 12791625 chr2L 12795279 12795305 F-element 7 3690 5.5 6.0 5.8 1.0 3705 chr2L 12791600 intergenic not near genes chr2L 12793452 intergenic not near genes chr2L 12795305 intergenic not near genes chr2L_7_12790001 chr2L_12790001 RAL-392 313 chr2L 12861693 12861723 chr2L 12863161 12863183 hobo 12 1473 1.5 3.5 2.5 3.4 1490 chr2L 12861693 intergenic not near genes chr2L 12862438 intergenic not near genes chr2L 12863183 intergenic not near genes chr2L_12_12860001 chr2L_12860001 RAL-392 314 chr2L 12905463 12905474 chr2L 12905567 12905578 5 103 8.0 6.0 7.0 0.6 115 chr2L 12905463 intergenic not near genes chr2L 12905520 intergenic not near genes chr2L 12905578 intergenic not near genes chr2L_5_12905001 chr2L_12905001 RAL-392 315 chr2L 12905477 12905500 chr2L 12905566 12905604 7 101 3.5 6.0 4.8 1.2 127 chr2L 12905477 intergenic not near genes chr2L 12905540 intergenic not near genes chr2L 12905604 intergenic not near genes chr2L_7_12905001 chr2L_12905001 RAL-392 316 chr2L 12933833 12933883 chr2L 12941320 12941370 blood 10 7482 6.5 5.0 5.8 1.5 7537 chr2L 12933833 intergenic not near genes chr2L 12937602 intergenic not near genes chr2L 12941370 intergenic not near genes chr2L_10_12935001 chr2L_12935001 RAL-392 317 chr2L 12955897 12955897 chr2L 12956077 12956097 4 191 1.5 1.5 1.5 1.6 200 chr2L 12955897 intergenic not near genes chr2L 12955997 intergenic not near genes chr2L 12956097 intergenic not near genes chr2L_4_12955001 chr2L_12955001 RAL-392 318 chr2L 13003328 13003339 chr2L 13003441 13003453 5 115 4.0 5.5 4.8 0.9 125 chr2L 13003328 intron Vha68-1 - chr2L 13003390 intron Vha68-1 - chr2L 13003453 intron Vha68-1 - chr2L_5_13000001 chr2L_13000001 RAL-392 319 chr2L 13003341 13003364 chr2L 13003437 13003481 7 110 3.5 5.5 4.5 1.3 140 chr2L 13003341 intron Vha68-1 - chr2L 13003411 intron Vha68-1 - chr2L 13003481 intron Vha68-1 - chr2L_7_13000001 chr2L_13000001 RAL-392 320 chr2L 13034579 13034628 chr2L 13034796 13034846 16 215 9.5 7.5 8.5 1.7 267 chr2L 13034579 intron CG9932 - chr2L 13034712 intron CG9932 - chr2L 13034846 intron CG9932 - chr2L_16_13030001 chr2L_13030001 RAL-392 321 chr2L 13080642 13080678 chr2L 13080741 13080777 6 97 2.5 2.0 2.2 1.9 135 chr2L 13080642 intergenic not near genes chr2L 13080710 intergenic not near genes chr2L 13080777 intergenic not near genes chr2L_6_13080001 chr2L_13080001 RAL-392 322 chr2L 13088945 13088970 chr2L 13089045 13089070 4 100 6.5 10.0 8.2 0.4 125 chr2L 13088945 intergenic not near genes chr2L 13089008 intergenic not near genes chr2L 13089070 intergenic not near genes chr2L_4_13085001 chr2L_13085001 RAL-392 323 chr2L 13088972 13088989 chr2L 13089038 13089043 4 68 2.0 7.5 4.8 0.7 71 chr2L 13088972 intergenic not near genes chr2L 13089008 intergenic not near genes chr2L 13089043 intergenic not near genes chr2L_4_13085001 chr2L_13085001 RAL-392 324 chr2L 13110987 13110998 chr2L 13111093 13111099 5 104 11.5 2.0 6.8 0.6 112 chr2L 13110987 intergenic not near genes chr2L 13111043 intergenic not near genes chr2L 13111099 intergenic not near genes chr2L_5_13110001 chr2L_13110001 RAL-392 325 chr2L 13215375 13215413 chr2L 13215670 13215677 16 289 4.5 5.0 4.8 2.8 302 chr2L 13215375 intergenic kek4 -,snRNA:U2:34ABb +,snRNA:U2:34ABc + chr2L 13215526 intergenic kek4 -,snRNA:U2:34ABb +,snRNA:U2:34ABc + chr2L 13215677 intergenic snRNA:U2:34ABb +,snRNA:U2:34ABc +,kek4 - chr2L_16_13215001 chr2L_13215001 RAL-392 326 chr2L 13398700 13398745 chr2L 13398800 13398845 19 98 3.5 2.0 2.8 5.0 145 chr2L 13398700 intergenic CG10859 -,CR44600 -,CG7110 + chr2L 13398772 intergenic CR44600 -,CG10859 -,CG7110 + chr2L 13398845 intergenic CR44600 -,CG7110 +,CG10859 - chr2L_19_13395001 chr2L_13395001 RAL-392 327 chr2L 13405639 13405676 chr2L 13410443 13410483 Doc 11 4812 4.5 5.5 5.0 1.8 4844 chr2L 13405639 exon CG7110 + chr2L 13408061 intron CG7110 + chr2L 13410483 intron CG7110 + chr2L_11_13405001 chr2L_13405001 RAL-392 328 chr2L 13432324 13432331 chr2L 13432408 13432408 4 84 3.0 0.0 1.5 1.6 84 chr2L 13432324 intron CG42784 + chr2L 13432366 intron CG42784 + chr2L 13432408 intron CG42784 + chr2L_4_13430001 chr2L_13430001 RAL-392 329 chr2L 13449486 13449496 chr2L 13456925 13456952 Quasimodo 6 7448 2.0 8.5 5.2 1.0 7466 chr2L 13449486 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453219 intron CG42784 + chr2L 13456952 intron CG42784 + chr2L_6_13450001 chr2L_13450001 RAL-392 330 chr2L 13481448 13481467 chr2L 13482069 13482084 jockey 9 623 8.0 7.5 7.8 1.0 636 chr2L 13481448 intron CG42784 + chr2L 13481766 intron CG42784 + chr2L 13482084 intron CG42784 + chr2L_9_13480001 chr2L_13480001 RAL-392 331 chr2L 13560405 13560419 chr2L 13565234 13565259 F-element 12 4836 13.5 7.0 10.2 1.1 4854 chr2L 13560405 intron kuz + chr2L 13562832 intron kuz + chr2L 13565259 intron kuz + chr2L_12_13560001 chr2L_13560001 RAL-392 332 chr2L 13591763 13591778 chr2L 13591861 13591882 10 102 0.0 4.5 2.2 3.1 119 chr2L 13591763 intron kuz + chr2L 13591822 intron kuz + chr2L 13591882 intron kuz + chr2L_10_13590001 chr2L_13590001 RAL-392 333 chr2L 13701869 13701884 chr2L 13701969 13701984 5 99 8.5 5.5 7.0 0.6 115 chr2L 13701869 intron CG31814 - chr2L 13701926 intron CG31814 - chr2L 13701984 intron CG31814 - chr2L_5_13700001 chr2L_13700001 RAL-392 334 chr2L 13701887 13701917 chr2L 13701966 13702002 15 93 5.0 5.5 5.2 2.4 115 chr2L 13701887 intron CG31814 - chr2L 13701944 intron CG31814 - chr2L 13702002 intron CG31814 - chr2L_15_13700001 chr2L_13700001 RAL-392 335 chr2L 13720220 13720241 chr2L 13720328 13720349 10 106 5.0 0.0 2.5 2.9 129 chr2L 13720220 intergenic not near genes chr2L 13720284 intergenic not near genes chr2L 13720349 intergenic not near genes chr2L_10_13720001 chr2L_13720001 RAL-392 336 chr2L 13740073 13740094 chr2L 13740160 13740164 4 86 0.0 7.5 3.8 0.8 91 chr2L 13740073 intergenic not near genes chr2L 13740118 intergenic not near genes chr2L 13740164 intergenic not near genes chr2L_4_13740001 chr2L_13740001 RAL-392 337 chr2L 13761269 13761313 chr2L 13761372 13761392 13 94 2.5 3.0 2.8 3.4 123 chr2L 13761269 intron TM9SF4 + chr2L 13761330 intron TM9SF4 + chr2L 13761392 intron TM9SF4 + chr2L_13_13760001 chr2L_13760001 RAL-392 338 chr2L 13761812 13761826 chr2L 13762917 13762917 Doc 7 1117 9.5 2.5 6.0 1.0 1105 chr2L 13761812 intron TM9SF4 + chr2L 13762364 intron TM9SF4 + chr2L 13762917 intron TM9SF4 + chr2L_7_13760001 chr2L_13760001 RAL-392 339 chr2L 13794683 13794698 chr2L 13794802 13794808 4 117 4.0 5.0 4.5 0.7 125 chr2L 13794683 intron Sec71 + chr2L 13794746 intron Sec71 + chr2L 13794808 intron Sec71 + chr2L_4_13790001 chr2L_13790001 RAL-392 340 chr2L 13794705 13794729 chr2L 13794799 13794821 7 109 2.0 4.5 3.2 1.7 116 chr2L 13794705 intron Sec71 + chr2L 13794763 intron Sec71 + chr2L 13794821 intron Sec71 + chr2L_7_13790001 chr2L_13790001 RAL-392 341 chr2L 13842111 13842163 chr2L 13842215 13842245 14 96 3.5 4.5 4.0 2.8 134 chr2L 13842111 intron CenG1A + chr2L 13842178 intron CenG1A + chr2L 13842245 intron CenG1A + chr2L_14_13840001 chr2L_13840001 RAL-392 342 chr2L 13853078 13853115 chr2L 13862239 13862277 roo 9 9168 4.0 6.0 5.0 1.5 9199 chr2L 13853078 intron CenG1A + chr2L 13857678 intron CenG1A + chr2L 13862277 intron CenG1A + chr2L_9_13855001 chr2L_13855001 RAL-392 343 chr2L 13988280 13988298 chr2L 13988367 13988405 9 100 7.0 6.0 6.5 1.2 125 chr2L 13988280 intron rk - chr2L 13988342 intron rk - chr2L 13988405 intron rk - chr2L_9_13985001 chr2L_13985001 RAL-392 344 chr2L 14058673 14058692 chr2L 14058782 14058801 5 109 4.0 4.5 4.2 1.0 128 chr2L 14058673 intron nAChRalpha5 + chr2L 14058737 intron nAChRalpha5 + chr2L 14058801 intron nAChRalpha5 + chr2L_5_14055001 chr2L_14055001 RAL-392 345 chr2L 14102849 14102854 chr2L 14102934 14102955 5 94 0.0 0.0 0.0 5.0 106 chr2L 14102849 intergenic not near genes chr2L 14102902 intergenic not near genes chr2L 14102955 intergenic not near genes chr2L_5_14100001 chr2L_14100001 RAL-392 346 chr2L 14284797 14284828 chr2L 14285261 14285262 7 459 4.5 3.5 4.0 1.4 465 chr2L 14284797 intron wb + chr2L 14285030 intron wb + chr2L 14285262 intron wb + chr2L_7_14285001 chr2L_14285001 RAL-392 347 chr2L 14366245 14366260 chr2L 14366560 14366575 7 315 18.0 3.5 10.8 0.6 330 chr2L 14366245 3` UTR spel1 + chr2L 14366410 3` UTR spel1 + chr2L 14366575 3` UTR spel1 + chr2L_7_14365001 chr2L_14365001 RAL-392 348 chr2L 14366261 14366294 chr2L 14366558 14366559 7 305 6.0 3.5 4.8 1.2 298 chr2L 14366261 3` UTR spel1 + chr2L 14366410 3` UTR spel1 + chr2L 14366559 3` UTR spel1 + chr2L_7_14365001 chr2L_14365001 RAL-392 349 chr2L 14369142 14369162 chr2L 14369251 14369285 6 124 1.5 6.5 4.0 1.2 143 chr2L 14369142 intergenic not near genes chr2L 14369214 intergenic not near genes chr2L 14369285 intergenic not near genes chr2L_6_14365001 chr2L_14365001 RAL-392 350 chr2L 14443292 14443346 chr2L 14443435 14443458 21 135 3.0 6.0 4.5 3.8 166 chr2L 14443292 intergenic not near genes chr2L 14443375 intergenic not near genes chr2L 14443458 intergenic not near genes chr2L_21_14440001 chr2L_14440001 RAL-392 351 chr2L 14504226 14504272 chr2L 14504383 14504429 13 152 5.5 4.5 5.0 2.2 203 chr2L 14504226 intergenic not near genes chr2L 14504328 intergenic not near genes chr2L 14504429 intergenic not near genes chr2L_13_14500001 chr2L_14500001 RAL-392 352 chr2L 14548299 14548336 chr2L 14548388 14548435 11 94 5.5 5.5 5.5 1.7 136 chr2L 14548299 intron CG4218 - chr2L 14548367 intron CG4218 - chr2L 14548435 intron CG4218 - chr2L_11_14545001 chr2L_14545001 RAL-392 353 chr2L 14570700 14570720 chr2L 14570801 14570821 7 101 0.0 4.5 2.2 2.2 121 chr2L 14570700 intergenic not near genes chr2L 14570760 intergenic not near genes chr2L 14570821 intergenic not near genes chr2L_7_14570001 chr2L_14570001 RAL-392 354 chr2L 14575923 14575962 chr2L 14576125 14576158 13 209 32.5 27.5 30.0 0.4 235 chr2L 14575923 intergenic not near genes chr2L 14576040 intergenic CR44856 + chr2L 14576158 intergenic CR44856 + chr2L_13_14575001 chr2L_14575001 RAL-392 355 chr2L 14582791 14582831 chr2L 14582898 14582924 4 101 0.5 3.5 2.0 1.3 133 chr2L 14582791 intergenic not near genes chr2L 14582858 intergenic not near genes chr2L 14582924 intergenic not near genes chr2L_4_14580001 chr2L_14580001 RAL-392 356 chr2L 14613252 14613294 chr2L 14613503 14613534 10 249 2.5 4.0 3.2 2.4 282 chr2L 14613252 intron osp - chr2L 14613393 intron,5` UTR osp -,CR43411 + chr2L 14613534 intron,5` UTR osp -,CR43411 + chr2L_10_14610001 chr2L_14610001 RAL-392 357 chr2L 14641383 14641438 chr2L 14641481 14641537 15 94 1.0 2.5 1.8 5.4 154 chr2L 14641383 intron osp - chr2L 14641460 intron osp - chr2L 14641537 intron osp - chr2L_15_14640001 chr2L_14640001 RAL-392 358 chr2L 14641836 14641843 chr2L 14641914 14641928 4 87 5.5 0.0 2.8 1.1 92 chr2L 14641836 intron osp - chr2L 14641882 intron osp - chr2L 14641928 intron osp - chr2L_4_14640001 chr2L_14640001 RAL-392 359 chr2L 14831616 14831641 chr2L 14831773 14831795 6 154 3.0 6.0 4.5 1.1 179 chr2L 14831616 intergenic not near genes chr2L 14831706 intergenic not near genes chr2L 14831795 intergenic not near genes chr2L_6_14830001 chr2L_14830001 RAL-392 360 chr2L 14833773 14833824 chr2L 14833897 14833920 5 110 3.0 2.5 2.8 1.3 147 chr2L 14833773 intergenic not near genes chr2L 14833846 intergenic not near genes chr2L 14833920 intergenic not near genes chr2L_5_14830001 chr2L_14830001 RAL-392 361 chr2L 14840969 14841007 chr2L 14841062 14841104 5 95 1.5 2.5 2.0 1.7 135 chr2L 14840969 3` UTR CR43805 - chr2L 14841036 3` UTR CR43805 - chr2L 14841104 3` UTR CR43805 - chr2L_5_14840001 chr2L_14840001 RAL-392 362 chr2L 14889950 14889980 chr2L 14890393 14890425 jockey 5 445 4.5 6.0 5.2 0.8 475 chr2L 14889950 intergenic not near genes chr2L 14890188 intergenic not near genes chr2L 14890425 intergenic not near genes chr2L_5_14890001 chr2L_14890001 RAL-392 363 chr2L 14920013 14920052 chr2L 14920112 14920151 7 95 7.5 2.5 5.0 1.2 138 chr2L 14920013 intron CG42313 - chr2L 14920082 intron CG42313 - chr2L 14920151 intron CG42313 - chr2L_7_14920001 chr2L_14920001 RAL-392 364 chr2L 14954820 14954865 chr2L 14967759 14967807 9 12944 29.0 22.5 25.8 0.3 12987 chr2L 14954820 intron CG42313 - chr2L 14961314 intron CG42313 - chr2L 14967807 intron CG42313 - chr2L_9_14960001 chr2L_14960001 RAL-392 365 chr2L 14982127 14982289 chr2L 14982254 14982395 21 113 0.0 0.0 0.0 21.0 268 chr2L 14982127 intron mol - chr2L 14982261 intron mol - chr2L 14982395 intron mol - chr2L_21_14980001 chr2L_14980001 RAL-392 366 chr2L 14984381 14984401 chr2L 14991985 14992022 opus 8 7614 0.5 3.0 1.8 2.9 7641 chr2L 14984381 intron mol - chr2L 14988202 intron mol - chr2L 14992022 intron mol - chr2L_8_14985001 chr2L_14985001 RAL-392 367 chr2L 15013132 15013181 chr2L 15013256 15013293 8 119 2.5 5.0 3.8 1.7 161 chr2L 15013132 intergenic CR43856 - chr2L 15013212 intergenic not near genes chr2L 15013293 intergenic not near genes chr2L_8_15010001 chr2L_15010001 RAL-392 368 chr2L 15018580 15018617 chr2L 15018843 15018875 22 259 5.5 4.5 5.0 3.7 295 chr2L 15018580 intron GABA-B-R1 + chr2L 15018728 intron GABA-B-R1 + chr2L 15018875 intron GABA-B-R1 + chr2L_22_15015001 chr2L_15015001 RAL-392 369 chr2L 15044727 15044737 chr2L 15044790 15044823 7 87 6.0 1.5 3.8 1.5 96 chr2L 15044727 intergenic ck - chr2L 15044775 intergenic ck - chr2L 15044823 intergenic ck - chr2L_7_15040001 chr2L_15040001 RAL-392 370 chr2L 15056706 15056737 chr2L 15056804 15056846 15 102 6.5 2.5 4.5 2.7 140 chr2L 15056706 intron ck - chr2L 15056776 intron ck - chr2L 15056846 intron ck - chr2L_15_15055001 chr2L_15055001 RAL-392 371 chr2L 15078056 15078099 chr2L 15078159 15078181 12 95 2.5 4.0 3.2 2.9 125 chr2L 15078056 intron CG15270 + chr2L 15078118 intron CG15270 + chr2L 15078181 intron CG15270 + chr2L_12_15075001 chr2L_15075001 RAL-392 372 chr2L 15098521 15098541 chr2L 15098621 15098626 4 92 8.0 3.5 5.8 0.6 105 chr2L 15098521 intergenic not near genes chr2L 15098574 intergenic not near genes chr2L 15098626 intergenic not near genes chr2L_4_15095001 chr2L_15095001 RAL-392 373 chr2L 15122768 15122809 chr2L 15122855 15122909 14 98 5.5 4.5 5.0 2.3 141 chr2L 15122768 intergenic not near genes chr2L 15122838 intergenic not near genes chr2L 15122909 intergenic not near genes chr2L_14_15120001 chr2L_15120001 RAL-392 374 chr2L 15313733 15313767 chr2L 15313862 15313867 10 124 6.5 3.5 5.0 1.7 134 chr2L 15313733 intergenic not near genes chr2L 15313800 intergenic not near genes chr2L 15313867 intergenic not near genes chr2L_10_15310001 chr2L_15310001 RAL-392 375 chr2L 15375798 15375840 chr2L 15375930 15375972 16 130 4.5 4.5 4.5 2.9 174 chr2L 15375798 intergenic not near genes chr2L 15375885 intergenic not near genes chr2L 15375972 intergenic not near genes chr2L_16_15375001 chr2L_15375001 RAL-392 376 chr2L 15443317 15443349 chr2L 15443410 15443453 5 88 1.5 1.5 1.5 2.0 136 chr2L 15443317 intergenic not near genes chr2L 15443385 intergenic not near genes chr2L 15443453 intergenic not near genes chr2L_5_15440001 chr2L_15440001 RAL-392 377 chr2L 15446046 15446060 chr2L 15453527 15453549 blood 8 7487 7.0 9.5 8.2 0.9 7503 chr2L 15446046 intergenic not near genes chr2L 15449798 intergenic not near genes chr2L 15453549 intergenic not near genes chr2L_8_15445001 chr2L_15445001 RAL-392 378 chr2L 15446061 15446081 chr2L 15453519 15453563 blood 8 7484 4.5 7.0 5.8 1.2 7502 chr2L 15446061 intergenic not near genes chr2L 15449812 intergenic not near genes chr2L 15453563 intergenic not near genes chr2L_8_15445001 chr2L_15445001 RAL-392 379 chr2L 15490027 15490044 chr2L 15490163 15490179 5 135 0.0 9.5 4.8 0.9 152 chr2L 15490027 intergenic not near genes chr2L 15490103 intergenic not near genes chr2L 15490179 intergenic not near genes chr2L_5_15490001 chr2L_15490001 RAL-392 380 chr2L 15499895 15499945 chr2L 15500003 15500043 6 102 3.5 4.0 3.8 1.2 148 chr2L 15499895 intron lace + chr2L 15499969 intron lace + chr2L 15500043 intron lace + chr2L_6_15495001 chr2L_15495001 RAL-392 381 chr2L 15521612 15521654 chr2L 15521715 15521757 15 103 6.0 4.0 5.0 2.5 145 chr2L 15521612 intergenic CR43761 + chr2L 15521684 intergenic CR43761 + chr2L 15521757 intergenic CR43761 + chr2L_15_15520001 chr2L_15520001 RAL-392 382 chr2L 15527415 15527440 chr2L 15527513 15527534 4 97 0.5 5.5 3.0 1.0 119 chr2L 15527415 intergenic not near genes chr2L 15527474 intergenic not near genes chr2L 15527534 intergenic not near genes chr2L_4_15525001 chr2L_15525001 RAL-392 383 chr2L 15533278 15533298 chr2L 15533342 15533371 7 74 1.5 3.0 2.2 2.2 93 chr2L 15533278 intergenic not near genes chr2L 15533324 intergenic not near genes chr2L 15533371 intergenic not near genes chr2L_7_15530001 chr2L_15530001 RAL-392 384 chr2L 15541330 15541349 chr2L 15541432 15541441 4 98 9.0 4.0 6.5 0.5 111 chr2L 15541330 intergenic not near genes chr2L 15541386 intergenic not near genes chr2L 15541441 intergenic not near genes chr2L_4_15540001 chr2L_15540001 RAL-392 385 chr2L 15541356 15541378 chr2L 15541430 15541472 16 89 7.0 4.0 5.5 2.5 116 chr2L 15541356 intergenic not near genes chr2L 15541414 intergenic not near genes chr2L 15541472 intergenic not near genes chr2L_16_15540001 chr2L_15540001 RAL-392 386 chr2L 15555181 15555208 chr2L 15555328 15555355 5 145 2.0 6.0 4.0 1.0 174 chr2L 15555181 intron kek3 + chr2L 15555268 intron kek3 + chr2L 15555355 intron kek3 + chr2L_5_15555001 chr2L_15555001 RAL-392 387 chr2L 15586389 15586442 chr2L 15593461 15593513 297 15 7069 4.0 3.5 3.8 3.1 7124 chr2L 15586389 intergenic not near genes chr2L 15589951 intergenic not near genes chr2L 15593513 intergenic not near genes chr2L_15_15585001 chr2L_15585001 RAL-392 388 chr2L 15598741 15598788 chr2L 15598847 15598894 10 102 1.5 1.0 1.2 4.5 153 chr2L 15598741 intergenic not near genes chr2L 15598818 intergenic not near genes chr2L 15598894 intergenic not near genes chr2L_10_15595001 chr2L_15595001 RAL-392 389 chr2L 15624913 15624963 chr2L 15625029 15625078 12 111 5.0 1.0 3.0 3.0 165 chr2L 15624913 intergenic not near genes chr2L 15624996 intergenic not near genes chr2L 15625078 intergenic not near genes chr2L_12_15620001 chr2L_15620001 RAL-392 390 chr2L 15642962 15642983 chr2L 15643043 15643084 10 100 4.0 5.0 4.5 1.8 122 chr2L 15642962 intergenic not near genes chr2L 15643023 intergenic not near genes chr2L 15643084 intergenic not near genes chr2L_10_15640001 chr2L_15640001 RAL-392 391 chr2L 15751421 15751467 chr2L 15751518 15751564 6 97 3.5 3.0 3.2 1.4 143 chr2L 15751421 intergenic snRNA:U5:35D -,l(2)35Di - chr2L 15751492 intergenic snRNA:U5:35D -,l(2)35Di - chr2L 15751564 3` UTR snRNA:U5:35D - chr2L_6_15750001 chr2L_15750001 RAL-392 392 chr2L 15813998 15814050 chr2L 15814105 15814157 15 102 0.5 3.0 1.8 5.4 159 chr2L 15813998 intergenic not near genes chr2L 15814078 intergenic not near genes chr2L 15814157 intergenic not near genes chr2L_15_15810001 chr2L_15810001 RAL-392 393 chr2L 15819317 15819344 chr2L 15819395 15819433 5 91 0.5 1.5 1.0 2.5 116 chr2L 15819317 intergenic not near genes chr2L 15819375 intergenic not near genes chr2L 15819433 intergenic not near genes chr2L_5_15815001 chr2L_15815001 RAL-392 394 chr2L 15821062 15821076 chr2L 15821182 15821196 4 120 0.0 2.0 1.0 2.0 134 chr2L 15821062 intergenic not near genes chr2L 15821129 intergenic not near genes chr2L 15821196 intergenic not near genes chr2L_4_15820001 chr2L_15820001 RAL-392 395 chr2L 15887726 15887743 chr2L 15887849 15887869 7 132 7.0 1.0 4.0 1.4 143 chr2L 15887726 intergenic not near genes chr2L 15887798 intergenic not near genes chr2L 15887869 intergenic not near genes chr2L_7_15885001 chr2L_15885001 RAL-392 396 chr2L 15915650 15915669 chr2L 15915735 15915742 4 86 8.5 3.5 6.0 0.6 92 chr2L 15915650 intron beat-Ib - chr2L 15915696 intron beat-Ib - chr2L 15915742 intron beat-Ib - chr2L_4_15915001 chr2L_15915001 RAL-392 397 chr2L 15915670 15915685 chr2L 15915733 15915763 4 64 6.0 3.0 4.5 0.7 93 chr2L 15915670 intron beat-Ib - chr2L 15915716 intron beat-Ib - chr2L 15915763 intron beat-Ib - chr2L_4_15915001 chr2L_15915001 RAL-392 398 chr2L 15956004 15956011 chr2L 15957491 15957498 hobo 4 1487 9.0 4.5 6.8 0.5 1494 chr2L 15956004 intron beat-Ib - chr2L 15956751 intron beat-Ib - chr2L 15957498 intron beat-Ib - chr2L_4_15955001 chr2L_15955001 RAL-392 399 chr2L 15956016 15956052 chr2L 15957490 15957539 hobo 17 1479 7.5 4.5 6.0 2.4 1523 chr2L 15956016 intron beat-Ib - chr2L 15956778 intron beat-Ib - chr2L 15957539 intron beat-Ib - chr2L_17_15955001 chr2L_15955001 RAL-392 400 chr2L 16001460 16001494 chr2L 16001551 16001602 21 103 0.5 5.0 2.8 5.5 142 chr2L 16001460 intron beat-Ic + chr2L 16001531 intron beat-Ic + chr2L 16001602 intron beat-Ic + chr2L_21_16000001 chr2L_16000001 RAL-392 401 chr2L 16058109 16058149 chr2L 16058265 16058310 14 158 7.0 2.5 4.8 2.4 201 chr2L 16058109 intron beat-Ia + chr2L 16058210 intron beat-Ia + chr2L 16058310 intron beat-Ia + chr2L_14_16055001 chr2L_16055001 RAL-392 402 chr2L 16068562 16068605 chr2L 16068661 16068708 7 91 3.0 3.0 3.0 1.8 146 chr2L 16068562 intron beat-Ia + chr2L 16068635 intron beat-Ia + chr2L 16068708 intron beat-Ia + chr2L_7_16065001 chr2L_16065001 RAL-392 403 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 10 145889 21.0 20.0 20.5 0.5 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_10_16140001 chr2L_16140001 RAL-392 404 chr2L 16141147 16141190 chr2L 16146374 16146417 copia 19 5222 5.5 3.5 4.5 3.5 5270 chr2L 16141147 intergenic not near genes chr2L 16143782 intergenic not near genes chr2L 16146417 intergenic not near genes chr2L_19_16140001 chr2L_16140001 RAL-392 405 chr2L 16153735 16153762 chr2L 16160788 16160836 297 12 7071 5.5 5.0 5.2 1.9 7101 chr2L 16153735 intergenic not near genes chr2L 16157286 intergenic not near genes chr2L 16160836 intergenic not near genes chr2L_12_16155001 chr2L_16155001 RAL-392 406 chr2L 16163551 16163565 chr2L 16163650 16163664 6 98 1.0 9.0 5.0 1.0 113 chr2L 16163551 intergenic not near genes chr2L 16163608 intergenic not near genes chr2L 16163664 intergenic not near genes chr2L_6_16160001 chr2L_16160001 RAL-392 407 chr2L 9084337 9084340 chr2L 16217660 16217660 4 7133322 14.0 20.0 17.0 0.2 7133323 chr2L 9084337 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_4_12650001 chr2L_12650001 RAL-392 408 chr2L 16363921 16363963 chr2L 16364187 16364229 15 264 6.5 5.5 6.0 2.1 308 chr2L 16363921 intergenic not near genes chr2L 16364075 intergenic not near genes chr2L 16364229 intergenic not near genes chr2L_15_16360001 chr2L_16360001 RAL-392 409 chr2L 16367083 16367129 chr2L 16367180 16367226 29 95 2.5 4.5 3.5 6.4 143 chr2L 16367083 intergenic jhamt + chr2L 16367154 intergenic jhamt + chr2L 16367226 intergenic jhamt + chr2L_29_16365001 chr2L_16365001 RAL-392 410 chr2L 16384472 16384522 chr2L 16384580 16384607 15 94 6.0 1.5 3.8 3.1 135 chr2L 16384472 intergenic not near genes chr2L 16384540 intergenic not near genes chr2L 16384607 intergenic not near genes chr2L_15_16380001 chr2L_16380001 RAL-392 411 chr2L 16391781 16391812 chr2L 16391877 16391898 10 88 2.5 0.0 1.2 4.5 117 chr2L 16391781 intergenic not near genes chr2L 16391840 intergenic not near genes chr2L 16391898 intergenic not near genes chr2L_10_16390001 chr2L_16390001 RAL-392 412 chr2L 16395317 16395339 chr2L 16395492 16395514 5 174 8.0 8.0 8.0 0.6 197 chr2L 16395317 intergenic not near genes chr2L 16395416 intergenic not near genes chr2L 16395514 intergenic not near genes chr2L_5_16395001 chr2L_16395001 RAL-392 413 chr2L 16395343 16395361 chr2L 16395483 16395511 7 156 4.0 6.0 5.0 1.2 168 chr2L 16395343 intergenic not near genes chr2L 16395427 intergenic not near genes chr2L 16395511 intergenic not near genes chr2L_7_16395001 chr2L_16395001 RAL-392 414 chr2L 16504977 16505017 chr2L 16505102 16505147 17 124 0.0 8.5 4.2 3.3 170 chr2L 16504977 intron Tpr2 + chr2L 16505062 intron Tpr2 + chr2L 16505147 intron Tpr2 + chr2L_17_16505001 chr2L_16505001 RAL-392 415 chr2L 16551892 16551908 chr2L 16551964 16551995 6 84 9.0 4.0 6.5 0.8 103 chr2L 16551892 intron CG42389 + chr2L 16551944 intron CG42389 + chr2L 16551995 intron CG42389 + chr2L_6_16550001 chr2L_16550001 RAL-392 416 chr2L 16572197 16572241 chr2L 16572310 16572339 9 110 6.5 3.5 5.0 1.5 142 chr2L 16572197 intron CG42389 + chr2L 16572268 intron CG42389 + chr2L 16572339 intron CG42389 + chr2L_9_16570001 chr2L_16570001 RAL-392 417 chr2L 16693892 16693933 chr2L 16693993 16693995 5 91 5.0 1.5 3.2 1.2 103 chr2L 16693892 intron grp + chr2L 16693944 intron grp + chr2L 16693995 intron grp + chr2L_5_16690001 chr2L_16690001 RAL-392 418 chr2L 16713000 16713051 chr2L 16713139 16713170 8 128 5.5 5.0 5.2 1.3 170 chr2L 16713000 intron CG31808 - chr2L 16713085 intron CG31808 - chr2L 16713170 intron CG31808 - chr2L_8_16710001 chr2L_16710001 RAL-392 419 chr2L 16841003 16841042 chr2L 16841087 16841095 13 83 4.5 2.0 3.2 3.1 92 chr2L 16841003 intron,intron SclA +,SclB + chr2L 16841049 intron,intron SclA +,SclB + chr2L 16841095 intron,intron SclA +,SclB + chr2L_13_16840001 chr2L_16840001 RAL-392 420 chr2L 16867009 16867016 chr2L 16867124 16867130 5 115 1.5 3.5 2.5 1.4 121 chr2L 16867009 intergenic not near genes chr2L 16867070 intergenic not near genes chr2L 16867130 intergenic not near genes chr2L_5_16865001 chr2L_16865001 RAL-392 421 chr2L 16867018 16867036 chr2L 16867120 16867151 9 110 1.5 2.5 2.0 3.0 133 chr2L 16867018 intergenic not near genes chr2L 16867084 intergenic not near genes chr2L 16867151 intergenic not near genes chr2L_9_16865001 chr2L_16865001 RAL-392 422 chr2L 16958088 16958129 chr2L 16962896 16962937 Doc 19 4808 3.5 4.0 3.8 4.0 4849 chr2L 16958088 intergenic not near genes chr2L 16960512 intergenic not near genes chr2L 16962937 intergenic not near genes chr2L_19_16960001 chr2L_16960001 RAL-392 423 chr2L 17000101 17000127 chr2L 17000243 17000259 5 140 6.5 2.0 4.2 1.0 158 chr2L 17000101 intergenic not near genes chr2L 17000180 intergenic not near genes chr2L 17000259 intergenic not near genes chr2L_5_17000001 chr2L_17000001 RAL-392 424 chr2L 17018687 17018737 chr2L 17018783 17018823 7 93 3.5 0.0 1.8 2.5 136 chr2L 17018687 intergenic not near genes chr2L 17018755 intergenic not near genes chr2L 17018823 intergenic not near genes chr2L_7_17015001 chr2L_17015001 RAL-392 425 chr2L 17052398 17052444 chr2L 17052523 17052575 10 131 2.5 5.0 3.8 2.1 177 chr2L 17052398 intergenic not near genes chr2L 17052486 intergenic not near genes chr2L 17052575 intergenic not near genes chr2L_10_17050001 chr2L_17050001 RAL-392 426 chr2L 17053274 17053291 chr2L 17053704 17053714 4 428 2.5 3.0 2.8 1.1 440 chr2L 17053274 intergenic not near genes chr2L 17053494 intergenic not near genes chr2L 17053714 intergenic not near genes chr2L_4_17050001 chr2L_17050001 RAL-392 427 chr2L 17062741 17062764 chr2L 17062843 17062866 7 102 2.0 2.0 2.0 2.3 125 chr2L 17062741 intergenic not near genes chr2L 17062804 intergenic not near genes chr2L 17062866 intergenic not near genes chr2L_7_17060001 chr2L_17060001 RAL-392 428 chr2L 17167557 17167595 chr2L 17167808 17167848 pogo 5 253 5.0 2.0 3.5 1.1 291 chr2L 17167557 intron,intron CG34106 +,beat-IIIa + chr2L 17167702 intron,intron CG34106 +,beat-IIIa + chr2L 17167848 intron,intron CG34106 +,beat-IIIa + chr2L_5_17165001 chr2L_17165001 RAL-392 429 chr2L 17168052 17168068 chr2L 17168667 17168699 8 625 29.0 21.0 25.0 0.3 647 chr2L 17168052 intron,intron CG34106 +,beat-IIIa + chr2L 17168376 intron,intron CG34106 +,beat-IIIa + chr2L 17168699 intron,intron CG34106 +,beat-IIIa + chr2L_8_17165001 chr2L_17165001 RAL-392 430 chr2L 17199148 17199186 chr2L 17200630 17200673 hobo 7 1486 5.0 2.5 3.8 1.5 1525 chr2L 17199148 intron beat-IIIc - chr2L 17199910 intron beat-IIIc - chr2L 17200673 intron beat-IIIc - chr2L_7_17195001 chr2L_17195001 RAL-392 431 chr2L 17220798 17220842 chr2L 17220902 17220951 10 107 1.5 3.5 2.5 2.9 153 chr2L 17220798 intron beat-IIIc - chr2L 17220874 intron beat-IIIc - chr2L 17220951 intron beat-IIIc - chr2L_10_17220001 chr2L_17220001 RAL-392 432 chr2L 17264753 17264776 chr2L 17264848 17264876 7 97 3.5 10.5 7.0 0.9 123 chr2L 17264753 intergenic not near genes chr2L 17264814 intergenic not near genes chr2L 17264876 intergenic not near genes chr2L_7_17260001 chr2L_17260001 RAL-392 433 chr2L 17273196 17273229 chr2L 17277972 17277977 F-element 6 4782 3.0 1.5 2.2 1.9 4781 chr2L 17273196 intergenic not near genes chr2L 17275586 intergenic not near genes chr2L 17277977 intergenic not near genes chr2L_6_17275001 chr2L_17275001 RAL-392 434 chr2L 17289212 17289246 chr2L 17289310 17289345 5 94 9.5 0.5 5.0 0.8 133 chr2L 17289212 intergenic not near genes chr2L 17289278 intergenic not near genes chr2L 17289345 intergenic not near genes chr2L_5_17285001 chr2L_17285001 RAL-392 435 chr2L 17304968 17305009 chr2L 17305158 17305206 10 194 5.5 2.0 3.8 2.1 238 chr2L 17304968 intergenic not near genes chr2L 17305087 intergenic not near genes chr2L 17305206 intergenic not near genes chr2L_10_17305001 chr2L_17305001 RAL-392 436 chr2L 17310372 17310390 chr2L 17310486 17310494 6 110 1.0 3.0 2.0 2.0 122 chr2L 17310372 intergenic not near genes chr2L 17310433 intergenic not near genes chr2L 17310494 intergenic not near genes chr2L_6_17310001 chr2L_17310001 RAL-392 437 chr2L 17335522 17335572 chr2L 17336716 17336723 1360 6 1186 0.0 0.5 0.2 5.0 1201 chr2L 17335522 intergenic not near genes chr2L 17336122 intergenic not near genes chr2L 17336723 intergenic not near genes chr2L_6_17335001 chr2L_17335001 RAL-392 438 chr2L 17351931 17351955 chr2L 17352052 17352077 5 122 1.0 3.5 2.2 1.6 146 chr2L 17351931 intergenic not near genes chr2L 17352004 intergenic not near genes chr2L 17352077 intergenic not near genes chr2L_5_17350001 chr2L_17350001 RAL-392 439 chr2L 17360003 17360046 chr2L 17360201 17360244 11 196 1.0 0.0 0.5 7.3 241 chr2L 17360003 intergenic not near genes chr2L 17360124 intergenic not near genes chr2L 17360244 intergenic not near genes chr2L_11_17360001 chr2L_17360001 RAL-392 440 chr2L 17424687 17424739 chr2L 17424819 17424871 12 122 3.0 4.5 3.8 2.5 184 chr2L 17424687 intron Dif - chr2L 17424779 intron Dif - chr2L 17424871 intron Dif - chr2L_12_17420001 chr2L_17420001 RAL-392 441 chr2L 17432622 17432664 chr2L 17432708 17432758 8 87 2.5 3.0 2.8 2.1 136 chr2L 17432622 intron Dif - chr2L 17432690 intron Dif - chr2L 17432758 intron Dif - chr2L_8_17430001 chr2L_17430001 RAL-392 442 chr2L 17466949 17466987 chr2L 17467390 17467413 6 429 0.5 3.0 1.8 2.1 464 chr2L 17466949 intron BicD - chr2L 17467181 intron BicD - chr2L 17467413 intron BicD - chr2L_6_17465001 chr2L_17465001 RAL-392 443 chr2L 17538309 17538341 chr2L 17538615 17538656 16 310 4.0 6.5 5.2 2.6 347 chr2L 17538309 intergenic not near genes chr2L 17538482 intergenic not near genes chr2L 17538656 intergenic not near genes chr2L_16_17535001 chr2L_17535001 RAL-392 444 chr2L 17543588 17543610 chr2L 17543688 17543723 4 104 6.0 5.0 5.5 0.6 135 chr2L 17543588 intergenic not near genes chr2L 17543656 intergenic not near genes chr2L 17543723 intergenic not near genes chr2L_4_17540001 chr2L_17540001 RAL-392 445 chr2L 17543613 17543624 chr2L 17543685 17543697 7 80 3.0 4.0 3.5 1.6 84 chr2L 17543613 intergenic not near genes chr2L 17543655 intergenic not near genes chr2L 17543697 intergenic not near genes chr2L_7_17540001 chr2L_17540001 RAL-392 446 chr2L 17564145 17564174 chr2L 17564248 17564277 8 102 4.0 2.5 3.2 1.9 132 chr2L 17564145 intergenic not near genes chr2L 17564211 intergenic not near genes chr2L 17564277 intergenic not near genes chr2L_8_17560001 chr2L_17560001 RAL-392 447 chr2L 17577712 17577738 chr2L 17577808 17577834 13 94 7.0 6.5 6.8 1.7 122 chr2L 17577712 intergenic not near genes chr2L 17577773 intergenic not near genes chr2L 17577834 intergenic not near genes chr2L_13_17575001 chr2L_17575001 RAL-392 448 chr2L 17723768 17723801 chr2L 17723881 17723914 14 113 6.5 4.5 5.5 2.2 146 chr2L 17723768 intron CadN - chr2L 17723841 intron CadN - chr2L 17723914 intron CadN - chr2L_14_17720001 chr2L_17720001 RAL-392 449 chr2L 17741126 17741181 chr2L 17741230 17741264 17 100 5.0 1.0 3.0 4.2 138 chr2L 17741126 intron CadN - chr2L 17741195 intron CadN - chr2L 17741264 intron CadN - chr2L_17_17740001 chr2L_17740001 RAL-392 450 chr2L 17819907 17819937 chr2L 17825131 17825143 copia 5 5219 6.0 3.0 4.5 0.9 5236 chr2L 17819907 intron CadN2 - chr2L 17822525 intron CadN2 - chr2L 17825143 intron CadN2 - chr2L_5_17820001 chr2L_17820001 RAL-392 451 chr2L 17863611 17863645 chr2L 17863692 17863746 12 89 4.0 3.0 3.5 2.7 135 chr2L 17863611 intron CadN2 - chr2L 17863678 intron CadN2 - chr2L 17863746 intron CadN2 - chr2L_12_17860001 chr2L_17860001 RAL-392 452 chr2L 17911939 17911990 chr2L 17914137 17914142 pogo 6 2188 4.5 6.5 5.5 0.9 2203 chr2L 17911939 intergenic not near genes chr2L 17913040 intergenic not near genes chr2L 17914142 intergenic CG43271 - chr2L_6_17910001 chr2L_17910001 RAL-392 453 chr2L 17951927 17951945 chr2L 17953414 17953432 hobo 6 1484 8.5 2.0 5.2 1.0 1505 chr2L 17951927 intergenic CR44398 -,CR44397 - chr2L 17952680 intergenic not near genes chr2L 17953432 intergenic not near genes chr2L_6_17950001 chr2L_17950001 RAL-392 454 chr2L 17951946 17951977 chr2L 17953411 17953464 hobo 19 1478 5.0 1.5 3.2 4.5 1518 chr2L 17951946 intergenic CR44398 -,CR44397 - chr2L 17952705 intergenic not near genes chr2L 17953464 intergenic not near genes chr2L_19_17950001 chr2L_17950001 RAL-392 455 chr2L 18051861 18051900 chr2L 18061028 18061031 roo 8 9156 6.5 3.5 5.0 1.3 9170 chr2L 18051861 intron rdo + chr2L 18056446 intron rdo + chr2L 18061031 intron rdo + chr2L_8_18055001 chr2L_18055001 RAL-392 456 chr2L 18078261 18078300 chr2L 18078363 18078406 8 96 6.0 11.0 8.5 0.8 145 chr2L 18078261 intergenic Arr1 + chr2L 18078334 5` UTR Arr1 + chr2L 18078406 exon Arr1 + chr2L_8_18075001 chr2L_18075001 RAL-392 457 chr2L 18079810 18079845 chr2L 18079916 18079935 8 100 3.0 3.0 3.0 2.0 125 chr2L 18079810 intron Arr1 + chr2L 18079872 intron Arr1 + chr2L 18079935 intron Arr1 + chr2L_8_18075001 chr2L_18075001 RAL-392 458 chr2L 18107777 18107816 chr2L 18107873 18107883 11 90 2.5 8.5 5.5 1.7 106 chr2L 18107777 intergenic not near genes chr2L 18107830 intergenic not near genes chr2L 18107883 intergenic not near genes chr2L_11_18105001 chr2L_18105001 RAL-392 459 chr2L 18185015 18185025 chr2L 18185150 18185160 5 135 3.0 4.5 3.8 1.0 145 chr2L 18185015 intron CG42750 - chr2L 18185088 intron CG42750 - chr2L 18185160 intron,3` UTR CG42750 -,CR44900 - chr2L_5_18185001 chr2L_18185001 RAL-392 460 chr2L 18254792 18254841 chr2L 18254912 18254931 20 115 1.5 3.0 2.2 6.2 139 chr2L 18254792 intron CG42750 - chr2L 18254862 intron CG42750 - chr2L 18254931 intron CG42750 - chr2L_20_18250001 chr2L_18250001 RAL-392 461 chr2L 18286396 18286446 chr2L 18286509 18286559 7 104 1.5 6.0 3.8 1.5 163 chr2L 18286396 intergenic not near genes chr2L 18286478 intergenic not near genes chr2L 18286559 intergenic not near genes chr2L_7_18285001 chr2L_18285001 RAL-392 462 chr2L 18291553 18291557 chr2L 18291636 18291658 6 94 4.0 0.5 2.2 1.9 105 chr2L 18291553 intergenic CG43362 -,CR44693 +,CR44696 - chr2L 18291606 intergenic CR44693 +,CG43362 -,CR44696 - chr2L 18291658 intergenic CR44693 +,CG43362 -,CR44696 - chr2L_6_18290001 chr2L_18290001 RAL-392 463 chr2L 18408032 18408054 chr2L 18412809 18412833 Doc 8 4788 3.5 0.0 1.8 2.9 4801 chr2L 18408032 intergenic not near genes chr2L 18410432 intergenic not near genes chr2L 18412833 intergenic not near genes chr2L_8_18410001 chr2L_18410001 RAL-392 464 chr2L 18439057 18439104 chr2L 18439163 18439210 13 99 4.0 5.0 4.5 2.4 153 chr2L 18439057 intergenic not near genes chr2L 18439134 intergenic not near genes chr2L 18439210 intergenic not near genes chr2L_13_18435001 chr2L_18435001 RAL-392 465 chr2L 18442363 18442372 chr2L 18442426 18442471 5 82 2.0 5.0 3.5 1.1 108 chr2L 18442363 3` UTR RpS26 - chr2L 18442417 3` UTR RpS26 - chr2L 18442471 3` UTR RpS26 - chr2L_5_18440001 chr2L_18440001 RAL-392 466 chr2L 18449365 18449412 chr2L 18449485 18449533 9 118 4.0 2.5 3.2 2.1 168 chr2L 18449365 intergenic bsf -,ncm - chr2L 18449449 intergenic bsf -,ncm - chr2L 18449533 3` UTR bsf - chr2L_9_18445001 chr2L_18445001 RAL-392 467 chr2L 18538552 18538599 chr2L 18538654 18538689 8 99 1.0 3.0 2.0 2.7 137 chr2L 18538552 intron Pde11 - chr2L 18538620 intron Pde11 - chr2L 18538689 intron Pde11 - chr2L_8_18535001 chr2L_18535001 RAL-392 468 chr2L 18561538 18561546 chr2L 18561659 18561667 4 121 4.5 3.5 4.0 0.8 129 chr2L 18561538 intron Pde11 - chr2L 18561602 intron Pde11 - chr2L 18561667 intron Pde11 - chr2L_4_18560001 chr2L_18560001 RAL-392 469 chr2L 18561548 18561580 chr2L 18561657 18561701 11 119 1.5 3.5 2.5 3.1 153 chr2L 18561548 intron Pde11 - chr2L 18561624 intron Pde11 - chr2L 18561701 intron Pde11 - chr2L_11_18560001 chr2L_18560001 RAL-392 470 chr2L 18725390 18725429 chr2L 18725504 18725543 9 106 11.0 9.0 10.0 0.8 153 chr2L 18725390 intron CG10348 - chr2L 18725466 intron CG10348 - chr2L 18725543 intron CG10348 - chr2L_9_18725001 chr2L_18725001 RAL-392 471 chr2L 18811389 18811437 chr2L 18811491 18811534 11 99 5.0 0.0 2.5 3.1 145 chr2L 18811389 intergenic CG10570 -,CG42502 - chr2L 18811462 intergenic CG10570 -,CG42502 - chr2L 18811534 intergenic not near genes chr2L_11_18810001 chr2L_18810001 RAL-392 472 chr2L 18846420 18846462 chr2L 18846530 18846572 13 108 4.0 7.0 5.5 2.0 152 chr2L 18846420 intron CG17321 + chr2L 18846496 intron CG17321 + chr2L 18846572 intron CG17321 + chr2L_13_18845001 chr2L_18845001 RAL-392 473 chr2L 18883856 18883941 chr2L 18883933 18884032 7 83 1.5 1.5 1.5 2.8 176 chr2L 18883856 intergenic not near genes chr2L 18883944 intergenic not near genes chr2L 18884032 intergenic not near genes chr2L_7_18880001 chr2L_18880001 RAL-392 474 chr2L 18898401 18898428 chr2L 18898480 18898524 9 87 2.5 1.5 2.0 3.0 123 chr2L 18898401 intergenic not near genes chr2L 18898462 intergenic not near genes chr2L 18898524 intergenic not near genes chr2L_9_18895001 chr2L_18895001 RAL-392 475 chr2L 18902633 18902654 chr2L 18902904 18902931 10 287 4.0 3.5 3.8 2.1 298 chr2L 18902633 intergenic not near genes chr2L 18902782 intergenic not near genes chr2L 18902931 intergenic not near genes chr2L_10_18900001 chr2L_18900001 RAL-392 476 chr2L 18981391 18981401 chr2L 18981478 18981502 6 94 6.5 6.0 6.2 0.8 111 chr2L 18981391 intron Swip-1 - chr2L 18981446 intron Swip-1 - chr2L 18981502 intron Swip-1 - chr2L_6_18980001 chr2L_18980001 RAL-392 477 chr2L 19101835 19101871 chr2L 19101923 19101976 12 96 3.5 4.5 4.0 2.4 141 chr2L 19101835 intron Lim3 - chr2L 19101906 intron Lim3 - chr2L 19101976 intron Lim3 - chr2L_12_19100001 chr2L_19100001 RAL-392 478 chr2L 19121883 19121901 chr2L 19122000 19122018 8 116 2.5 11.5 7.0 1.0 135 chr2L 19121883 3` UTR l(2)37Cc - chr2L 19121950 3` UTR l(2)37Cc - chr2L 19122018 3` UTR l(2)37Cc - chr2L_8_19120001 chr2L_19120001 RAL-392 479 chr2L 19147389 19147402 chr2L 19154412 19154421 297 5 7037 2.0 5.0 3.5 1.1 7032 chr2L 19147389 intron brat + chr2L 19150905 intron brat + chr2L 19154421 intron brat + chr2L_5_19150001 chr2L_19150001 RAL-392 480 chr2L 19163230 19163276 chr2L 19163555 19163601 10 322 5.0 4.5 4.8 1.7 371 chr2L 19163230 intron brat + chr2L 19163416 intron brat + chr2L 19163601 intron brat + chr2L_10_19160001 chr2L_19160001 RAL-392 481 chr2L 19218470 19218493 chr2L 19218560 19218572 5 93 5.0 3.5 4.2 1.0 102 chr2L 19218470 intergenic CR44189 + chr2L 19218521 intergenic CR44189 + chr2L 19218572 intergenic CR44189 + chr2L_5_19215001 chr2L_19215001 RAL-392 482 chr2L 19237309 19237332 chr2L 19237404 19237427 6 97 3.5 1.5 2.5 1.7 118 chr2L 19237309 intergenic not near genes chr2L 19237368 intergenic not near genes chr2L 19237427 intergenic not near genes chr2L_6_19235001 chr2L_19235001 RAL-392 483 chr2L 19246821 19246833 chr2L 19246917 19246931 8 96 7.5 3.5 5.5 1.2 110 chr2L 19246821 intergenic not near genes chr2L 19246876 intergenic not near genes chr2L 19246931 intergenic not near genes chr2L_8_19245001 chr2L_19245001 RAL-392 484 chr2L 19251666 19251719 chr2L 19251786 19251839 17 114 1.5 7.5 4.5 3.1 173 chr2L 19251666 intergenic not near genes chr2L 19251752 intergenic not near genes chr2L 19251839 intergenic not near genes chr2L_17_19250001 chr2L_19250001 RAL-392 485 chr2L 19345018 19345025 chr2L 19357223 19357229 blood 4 12209 1.5 2.0 1.8 1.4 12211 chr2L 19345018 intron dnt - chr2L 19351124 intron dnt - chr2L 19357229 intron dnt - chr2L_4_19350001 chr2L_19350001 RAL-392 486 chr2L 19357535 19357569 chr2L 19357635 19357640 16 100 5.0 9.0 7.0 2.0 105 chr2L 19357535 intron dnt - chr2L 19357588 intron dnt - chr2L 19357640 intron dnt - chr2L_16_19355001 chr2L_19355001 RAL-392 487 chr2L 19364062 19364106 chr2L 19364162 19364206 23 98 4.0 4.0 4.0 4.6 144 chr2L 19364062 intergenic CG13086 + chr2L 19364134 intergenic CG13086 + chr2L 19364206 intergenic CG13086 + chr2L_23_19360001 chr2L_19360001 RAL-392 488 chr2L 19378329 19378374 chr2L 19378426 19378431 15 92 4.0 2.5 3.2 3.6 102 chr2L 19378329 intergenic not near genes chr2L 19378380 intergenic not near genes chr2L 19378431 intergenic not near genes chr2L_15_19375001 chr2L_19375001 RAL-392 489 chr2L 19380515 19380527 chr2L 19380589 19380627 5 84 2.5 3.0 2.8 1.3 112 chr2L 19380515 intergenic CG17350 + chr2L 19380571 intergenic CG17350 + chr2L 19380627 intergenic CG17350 + chr2L_5_19380001 chr2L_19380001 RAL-392 490 chr2L 19405605 19405642 chr2L 19405710 19405717 14 104 4.0 2.0 3.0 3.5 112 chr2L 19405605 intron Pax - chr2L 19405661 intron Pax - chr2L 19405717 intron Pax - chr2L_14_19405001 chr2L_19405001 RAL-392 491 chr2L 19407708 19407710 chr2L 19407914 19407927 5 213 9.0 6.5 7.8 0.6 219 chr2L 19407708 intron Pax - chr2L 19407818 intron Pax - chr2L 19407927 intron Pax - chr2L_5_19405001 chr2L_19405001 RAL-392 492 chr2L 19407717 19407740 chr2L 19407913 19407957 14 210 4.5 6.0 5.2 2.3 240 chr2L 19407717 intron Pax - chr2L 19407837 intron Pax - chr2L 19407957 intron Pax - chr2L_14_19405001 chr2L_19405001 RAL-392 493 chr2L 19437501 19437531 chr2L 19437613 19437643 11 112 7.0 0.5 3.8 2.3 142 chr2L 19437501 intron CG10237 - chr2L 19437572 intron CG10237 - chr2L 19437643 intron CG10237 - chr2L_11_19435001 chr2L_19435001 RAL-392 494 chr2L 19441055 19441089 chr2L 19441142 19441186 19 94 5.5 8.0 6.8 2.4 131 chr2L 19441055 intron CG10237 - chr2L 19441120 intron CG10237 - chr2L 19441186 5` UTR CG10237 - chr2L_19_19440001 chr2L_19440001 RAL-392 495 chr2L 19544601 19544617 chr2L 19544670 19544684 4 66 4.5 5.0 4.8 0.7 83 chr2L 19544601 exon ref(2)P + chr2L 19544642 exon ref(2)P + chr2L 19544684 exon ref(2)P + chr2L_4_19540001 chr2L_19540001 RAL-392 496 chr2L 19562551 19562558 chr2L 19562616 19562616 8 85 1.0 3.5 2.2 2.5 65 chr2L 19562551 intron Tep5 + chr2L 19562584 intron Tep5 + chr2L 19562616 intron Tep5 + chr2L_8_19560001 chr2L_19560001 RAL-392 497 chr2L 19601555 19601583 chr2L 19601652 19601680 13 94 7.0 6.5 6.8 1.7 125 chr2L 19601555 intron,intron Lar +,CR44978 - chr2L 19601618 intron,intron Lar +,CR44978 - chr2L 19601680 intron,intron Lar +,CR44978 - chr2L_13_19600001 chr2L_19600001 RAL-392 498 chr2L 19601585 19601596 chr2L 19601651 19601693 6 87 4.0 6.5 5.2 1.0 108 chr2L 19601585 intron,intron Lar +,CR44978 - chr2L 19601639 intron,intron Lar +,CR44978 - chr2L 19601693 intron,intron Lar +,CR44978 - chr2L_6_19600001 chr2L_19600001 RAL-392 499 chr2L 19608590 19608611 chr2L 19608701 19608722 12 109 5.5 6.5 6.0 1.7 132 chr2L 19608590 intron Lar + chr2L 19608656 intron Lar + chr2L 19608722 intron Lar + chr2L_12_19605001 chr2L_19605001 RAL-392 500 chr2L 19620091 19620129 chr2L 19621085 19621107 jockey 10 994 3.5 4.0 3.8 2.1 1016 chr2L 19620091 intron Lar + chr2L 19620599 intron Lar + chr2L 19621107 intron Lar + chr2L_10_19620001 chr2L_19620001 RAL-392 501 chr2L 19652555 19652603 chr2L 19674011 19674043 opus 13 21450 3.5 5.5 4.5 2.4 21488 chr2L 19652555 intron Lar + chr2L 19663299 intron Lar + chr2L 19674043 intron Lar + chr2L_13_19660001 chr2L_19660001 RAL-392 502 chr2L 19697128 19697154 chr2L 19697236 19697251 4 104 4.5 3.5 4.0 0.8 123 chr2L 19697128 intron Lar + chr2L 19697190 intron Lar + chr2L 19697251 intron Lar + chr2L_4_19695001 chr2L_19695001 RAL-392 503 chr2L 19703519 19703568 chr2L 19712675 19712693 roo 9 9146 6.5 1.0 3.8 1.9 9174 chr2L 19703519 intron Lar + chr2L 19708106 intron Lar + chr2L 19712693 intron Lar + chr2L_9_19705001 chr2L_19705001 RAL-392 504 chr2L 19712680 19712716 chr2L 19712770 19712815 14 89 3.0 5.5 4.2 2.7 135 chr2L 19712680 intron Lar + chr2L 19712748 intron Lar + chr2L 19712815 intron Lar + chr2L_14_19710001 chr2L_19710001 RAL-392 505 chr2L 19737361 19737384 chr2L 19740825 19740848 1360 9 3469 2.0 7.5 4.8 1.6 3487 chr2L 19737361 intergenic Nf-YB + chr2L 19739104 intergenic not near genes chr2L 19740848 intergenic not near genes chr2L_9_19735001 chr2L_19735001 RAL-392 506 chr2L 19762796 19762835 chr2L 19763057 19763076 pogo 10 255 3.0 5.0 4.0 2.0 280 chr2L 19762796 5` UTR fbp - chr2L 19762936 intron fbp - chr2L 19763076 intron fbp - chr2L_10_19760001 chr2L_19760001 RAL-392 507 chr2L 19773149 19773192 chr2L 19773256 19773283 23 105 4.5 3.0 3.8 4.8 134 chr2L 19773149 intergenic not near genes chr2L 19773216 intergenic not near genes chr2L 19773283 intergenic not near genes chr2L_23_19770001 chr2L_19770001 RAL-392 508 chr2L 19824419 19824429 chr2L 19824511 19824531 5 99 1.5 4.0 2.8 1.3 112 chr2L 19824419 intron sick + chr2L 19824475 intron sick + chr2L 19824531 intron sick + chr2L_5_19820001 chr2L_19820001 RAL-392 509 chr2L 19837263 19837303 chr2L 19837356 19837388 17 91 4.0 3.0 3.5 3.8 125 chr2L 19837263 intron sick + chr2L 19837326 intron sick + chr2L 19837388 intron sick + chr2L_17_19835001 chr2L_19835001 RAL-392 510 chr2L 19846236 19846253 chr2L 19846337 19846354 5 101 1.0 7.0 4.0 1.0 118 chr2L 19846236 intron sick + chr2L 19846295 intron sick + chr2L 19846354 intron sick + chr2L_5_19845001 chr2L_19845001 RAL-392 511 chr2L 19846257 19846276 chr2L 19846326 19846366 8 87 0.5 5.5 3.0 2.0 109 chr2L 19846257 intron sick + chr2L 19846312 intron sick + chr2L 19846366 intron sick + chr2L_8_19845001 chr2L_19845001 RAL-392 512 chr2L 19890084 19890089 chr2L 19890183 19890183 4 98 4.0 5.5 4.8 0.7 99 chr2L 19890084 intron sick + chr2L 19890134 intron sick + chr2L 19890183 intron sick + chr2L_4_19890001 chr2L_19890001 RAL-392 513 chr2L 19911298 19911325 chr2L 19911393 19911408 8 102 2.5 6.0 4.2 1.5 110 chr2L 19911298 intron,3` UTR sick +,CR43097 - chr2L 19911353 intron,3` UTR sick +,CR43097 - chr2L 19911408 intron,3` UTR sick +,CR43097 - chr2L_8_19910001 chr2L_19910001 RAL-392 514 chr2L 19947697 19947734 chr2L 19947794 19947840 6 102 3.0 3.5 3.2 1.4 143 chr2L 19947697 intron sick + chr2L 19947768 intron sick + chr2L 19947840 intron sick + chr2L_6_19945001 chr2L_19945001 RAL-392 515 chr2L 19964825 19964868 chr2L 19964931 19964935 8 90 4.0 9.0 6.5 1.1 110 chr2L 19964825 intron CG10680 + chr2L 19964880 exon CG10680 + chr2L 19964935 exon CG10680 + chr2L_8_19960001 chr2L_19960001 RAL-392 516 chr2L 19973341 19973382 chr2L 19973433 19973439 15 84 5.5 4.0 4.8 2.6 98 chr2L 19973341 intron CG43861 - chr2L 19973390 intron CG43861 - chr2L 19973439 intron CG43861 - chr2L_15_19970001 chr2L_19970001 RAL-392 517 chr2L 20005855 20005882 chr2L 20010951 20010960 flea 5 5090 10.5 6.5 8.5 0.5 5105 chr2L 20005855 intron CG43861 - chr2L 20008408 intron CG43861 - chr2L 20010960 intron CG43861 - chr2L_5_20005001 chr2L_20005001 RAL-392 518 chr2L 20005884 20005903 chr2L 20010948 20010986 flea 7 5084 6.5 5.5 6.0 1.0 5102 chr2L 20005884 intron CG43861 - chr2L 20008435 intron CG43861 - chr2L 20010986 intron CG43861 - chr2L_7_20005001 chr2L_20005001 RAL-392 519 chr2L 20022071 20022089 chr2L 20022204 20022222 5 131 10.0 4.0 7.0 0.6 151 chr2L 20022071 intergenic not near genes chr2L 20022146 intergenic not near genes chr2L 20022222 intergenic not near genes chr2L_5_20020001 chr2L_20020001 RAL-392 520 chr2L 20026589 20026623 chr2L 20026691 20026725 10 102 6.0 4.5 5.2 1.6 136 chr2L 20026589 intergenic not near genes chr2L 20026657 intergenic not near genes chr2L 20026725 intergenic not near genes chr2L_10_20025001 chr2L_20025001 RAL-392 521 chr2L 20041414 20041461 chr2L 20041515 20041566 15 90 4.5 3.5 4.0 3.0 152 chr2L 20041414 intron sNPF + chr2L 20041490 intron sNPF + chr2L 20041566 intron sNPF + chr2L_15_20040001 chr2L_20040001 RAL-392 522 chr2L 20057059 20057073 chr2L 20057127 20057152 8 78 7.5 6.0 6.8 1.0 93 chr2L 20057059 intergenic not near genes chr2L 20057106 intergenic not near genes chr2L 20057152 intergenic not near genes chr2L_8_20055001 chr2L_20055001 RAL-392 523 chr2L 20079510 20079548 chr2L 20079640 20079689 21 138 5.0 1.0 3.0 5.2 179 chr2L 20079510 intron,intron neb +,fok - chr2L 20079600 intron,intron neb +,fok - chr2L 20079689 intron,intron neb +,fok - chr2L_21_20075001 chr2L_20075001 RAL-392 524 chr2L 20098698 20098747 chr2L 20098996 20099043 17 300 1.5 0.5 1.0 8.5 345 chr2L 20098698 intron Kua + chr2L 20098870 intron Kua + chr2L 20099043 intron Kua + chr2L_17_20095001 chr2L_20095001 RAL-392 525 chr2L 20122608 20122648 chr2L 20122718 20122759 8 105 6.5 4.5 5.5 1.2 151 chr2L 20122608 intergenic not near genes chr2L 20122684 intergenic not near genes chr2L 20122759 intergenic not near genes chr2L_8_20120001 chr2L_20120001 RAL-392 526 chr2L 20236500 20236539 chr2L 20236596 20236625 13 93 8.0 9.5 8.8 1.3 125 chr2L 20236500 intergenic not near genes chr2L 20236562 intergenic not near genes chr2L 20236625 intergenic not near genes chr2L_13_20235001 chr2L_20235001 RAL-392 527 chr2L 20250935 20250949 chr2L 20251001 20251005 5 68 4.5 1.5 3.0 1.2 70 chr2L 20250935 intergenic not near genes chr2L 20250970 intergenic not near genes chr2L 20251005 intergenic not near genes chr2L_5_20250001 chr2L_20250001 RAL-392 528 chr2L 20272101 20272131 chr2L 20282827 20282862 copia 6 10728 8.0 8.0 8.0 0.7 10761 chr2L 20272101 intergenic not near genes chr2L 20277482 intergenic not near genes chr2L 20282862 intergenic not near genes chr2L_6_20275001 chr2L_20275001 RAL-392 529 chr2L 20272133 20272145 chr2L 20282824 20282864 copia 10 10720 4.5 7.5 6.0 1.4 10731 chr2L 20272133 intergenic not near genes chr2L 20277498 intergenic not near genes chr2L 20282864 intergenic not near genes chr2L_10_20275001 chr2L_20275001 RAL-392 530 chr2L 20296499 20296538 chr2L 20296591 20296603 16 88 2.0 2.5 2.2 5.0 104 chr2L 20296499 intergenic CR43414 - chr2L 20296551 intergenic CR43414 - chr2L 20296603 intergenic CR43414 - chr2L_16_20295001 chr2L_20295001 RAL-392 531 chr2L 20299402 20299444 chr2L 20299535 20299587 7 123 1.5 2.0 1.8 2.5 185 chr2L 20299402 intergenic not near genes chr2L 20299494 intergenic not near genes chr2L 20299587 intergenic not near genes chr2L_7_20295001 chr2L_20295001 RAL-392 532 chr2L 20299996 20300018 chr2L 20300089 20300110 4 93 8.5 5.0 6.8 0.5 114 chr2L 20299996 intergenic not near genes chr2L 20300053 intergenic not near genes chr2L 20300110 intergenic not near genes chr2L_4_20300001 chr2L_20300001 RAL-392 533 chr2L 20302982 20303018 chr2L 20303092 20303115 10 101 3.5 1.5 2.5 2.9 133 chr2L 20302982 intergenic not near genes chr2L 20303048 intergenic not near genes chr2L 20303115 intergenic not near genes chr2L_10_20300001 chr2L_20300001 RAL-392 534 chr2L 20303159 20303189 chr2L 20310643 20310677 blood 9 7485 0.0 6.5 3.2 2.1 7518 chr2L 20303159 intergenic not near genes chr2L 20306918 intergenic not near genes chr2L 20310677 intergenic not near genes chr2L_9_20305001 chr2L_20305001 RAL-392 535 chr2L 20310874 20310919 chr2L 20310964 20310973 8 89 1.5 4.0 2.8 2.1 99 chr2L 20310874 intergenic spir + chr2L 20310924 intergenic spir + chr2L 20310973 intergenic spir + chr2L_8_20310001 chr2L_20310001 RAL-392 536 chr2L 20312527 20312562 chr2L 20312621 20312666 4 102 3.5 0.0 1.8 1.4 139 chr2L 20312527 intron spir + chr2L 20312596 intron spir + chr2L 20312666 intron spir + chr2L_4_20310001 chr2L_20310001 RAL-392 537 chr2L 20372198 20372224 chr2L 20372468 20372494 pogo 16 268 4.5 6.5 5.5 2.5 296 chr2L 20372198 intergenic Ugt37a1 - chr2L 20372346 intergenic Ugt37a1 - chr2L 20372494 exon Ugt37a1 - chr2L_16_20370001 chr2L_20370001 RAL-392 538 chr2L 20389301 20389352 chr2L 20389407 20389411 11 90 0.5 2.0 1.2 5.0 110 chr2L 20389301 intron CG10947 - chr2L 20389356 intron CG10947 - chr2L 20389411 intron CG10947 - chr2L_11_20385001 chr2L_20385001 RAL-392 539 chr2L 20498670 20498708 chr2L 20498789 20498813 12 116 6.0 6.0 6.0 1.7 143 chr2L 20498670 intergenic not near genes chr2L 20498742 intergenic not near genes chr2L 20498813 intergenic not near genes chr2L_12_20495001 chr2L_20495001 RAL-392 540 chr2L 20549111 20549153 chr2L 20549213 20549244 14 94 7.5 1.0 4.2 2.7 133 chr2L 20549111 intergenic not near genes chr2L 20549178 intergenic not near genes chr2L 20549244 intergenic not near genes chr2L_14_20545001 chr2L_20545001 RAL-392 541 chr2L 20553166 20553216 chr2L 20553262 20553312 12 92 6.0 3.0 4.5 2.2 146 chr2L 20553166 intergenic not near genes chr2L 20553239 intergenic not near genes chr2L 20553312 intergenic not near genes chr2L_12_20550001 chr2L_20550001 RAL-392 542 chr2L 20568644 20568683 chr2L 20569054 20569093 X-element 12 406 4.0 1.5 2.8 3.2 449 chr2L 20568644 intron CR45347 + chr2L 20568868 intron CR45347 + chr2L 20569093 intron CR45347 + chr2L_12_20565001 chr2L_20565001 RAL-392 543 chr2L 20576204 20576252 chr2L 20583685 20583709 blood 10 7472 5.0 1.0 3.0 2.5 7505 chr2L 20576204 intergenic CR45347 + chr2L 20579956 intergenic not near genes chr2L 20583709 3` UTR CR44909 - chr2L_10_20575001 chr2L_20575001 RAL-392 544 chr2L 20617343 20617386 chr2L 20618371 20618379 4 1016 3.0 2.0 2.5 1.1 1036 chr2L 20617343 intron CR44909 - chr2L 20617861 intron CR44909 - chr2L 20618379 intron,3` UTR CR44909 -,mir-288 - chr2L_4_20615001 chr2L_20615001 RAL-392 545 chr2L 20672154 20672197 chr2L 20672257 20672300 9 99 5.5 1.5 3.5 2.0 146 chr2L 20672154 intron CG31678 - chr2L 20672227 intron CG31678 - chr2L 20672300 intron CG31678 - chr2L_9_20670001 chr2L_20670001 RAL-392 546 chr2L 20674808 20674856 chr2L 20674913 20674954 7 101 2.0 0.0 1.0 3.5 146 chr2L 20674808 intron CG31678 - chr2L 20674881 intron CG31678 - chr2L 20674954 intron CG31678 - chr2L_7_20670001 chr2L_20670001 RAL-392 547 chr2L 20695774 20695829 chr2L 20695882 20695937 21 102 4.5 2.5 3.5 4.7 163 chr2L 20695774 intron Hr38 - chr2L 20695856 intron Hr38 - chr2L 20695937 intron Hr38 - chr2L_21_20695001 chr2L_20695001 RAL-392 548 chr2L 20708767 20708792 chr2L 20708962 20708987 13 200 5.5 2.5 4.0 2.6 220 chr2L 20708767 intron Hr38 - chr2L 20708877 intron Hr38 - chr2L 20708987 intron Hr38 - chr2L_13_20705001 chr2L_20705001 RAL-392 549 chr2L 20835795 20835821 chr2L 20836532 20836558 Quasimodo 14 735 6.0 2.5 4.2 2.7 763 chr2L 20835795 5` UTR Oseg5 - chr2L 20836176 intergenic Oseg5 -,Spn38F - chr2L 20836558 intergenic Spn38F - chr2L_14_20835001 chr2L_20835001 RAL-392 550 chr2L 20891522 20891543 chr2L 20896642 20896649 jockey 10 5117 4.0 4.5 4.2 1.9 5127 chr2L 20891522 intron,intron CG43739 -,sky - chr2L 20894086 intron,intron CG43739 -,sky - chr2L 20896649 intron,intron CG43739 -,sky - chr2L_10_20890001 chr2L_20890001 RAL-392 551 chr2L 20901476 20901488 chr2L 20902619 20902642 1360 4 1156 2.0 4.0 3.0 1.0 1166 chr2L 20901476 intron,intron CG43739 -,sky - chr2L 20902059 intron,intron CG43739 -,sky - chr2L 20902642 intron,intron CG43739 -,sky - chr2L_4_20900001 chr2L_20900001 RAL-392 552 chr2L 20946926 20946959 chr2L 20947033 20947066 4 107 6.0 2.0 4.0 0.8 140 chr2L 20946926 intergenic CR44606 - chr2L 20946996 intergenic CR44606 - chr2L 20947066 intergenic CR44606 - chr2L_4_20945001 chr2L_20945001 RAL-392 553 chr2L 20976635 20976666 chr2L 20981469 20981501 X-element 5 4832 4.0 4.0 4.0 1.0 4866 chr2L 20976635 intron CG42238 - chr2L 20979068 intron CG42238 - chr2L 20981501 intron CG42238 - chr2L_5_20975001 chr2L_20975001 RAL-392 554 chr2L 21020283 21020309 chr2L 21023953 21023996 NOF 8 3674 3.0 3.5 3.2 1.9 3713 chr2L 21020283 intron CG42238 - chr2L 21022140 intron CG42238 - chr2L 21023996 intron CG42238 - chr2L_8_21020001 chr2L_21020001 RAL-392 555 chr2L 21041161 21041168 chr2L 21049404 21049409 Tirant 4 8248 3.0 7.5 5.2 0.6 8248 chr2L 21041161 intron CG42238 - chr2L 21045285 intron CG42238 - chr2L 21049409 intron CG42238 - chr2L_4_21045001 chr2L_21045001 RAL-392 556 chr2L 21123217 21123237 chr2L 21123300 21123338 4 93 6.0 3.5 4.8 0.7 121 chr2L 21123217 intron Nhe2 + chr2L 21123278 intron Nhe2 + chr2L 21123338 intron Nhe2 + chr2L_4_21120001 chr2L_21120001 RAL-392 557 chr2L 21347531 21347579 chr2L 21355023 21355031 blood 14 7484 7.5 5.5 6.5 1.9 7500 chr2L 21347531 intron Tsp39D + chr2L 21351281 intron Tsp39D + chr2L 21355031 intron Tsp39D + chr2L_14_21350001 chr2L_21350001 RAL-392 558 chr2L 21355589 21355624 chr2L 21355754 21355757 9 157 8.5 3.0 5.8 1.3 168 chr2L 21355589 exon Tsp39D + chr2L 21355673 intron Tsp39D + chr2L 21355757 intron Tsp39D + chr2L_9_21355001 chr2L_21355001 RAL-392 559 chr2L 21396611 21396618 chr2L 21396834 21396873 4 240 4.0 11.0 7.5 0.5 262 chr2L 21396611 intergenic not near genes chr2L 21396742 intergenic not near genes chr2L 21396873 intergenic not near genes chr2L_4_21395001 chr2L_21395001 RAL-392 560 chr2L 21597025 21597052 chr2L 21604783 21604816 roo 6 7761 4.5 4.0 4.2 1.2 7791 chr2L 21597025 intergenic not near genes chr2L 21600920 intergenic not near genes chr2L 21604816 intergenic not near genes chr2L_6_21600001 chr2L_21600001 RAL-392 561 chr2L 21597053 21597059 chr2L 21604771 21604823 roo 4 7752 3.5 2.5 3.0 1.0 7770 chr2L 21597053 intergenic not near genes chr2L 21600938 intergenic not near genes chr2L 21604823 intergenic not near genes chr2L_4_21600001 chr2L_21600001 RAL-392 562 chr2L 21653194 21653223 chr2L 21656503 21656547 invader4 11 3320 1.5 7.0 4.2 2.1 3353 chr2L 21653194 intergenic not near genes chr2L 21654870 intergenic not near genes chr2L 21656547 intergenic not near genes chr2L_11_21650001 chr2L_21650001 RAL-392 563 chr2L 21684297 21684333 chr2L 21684565 21684589 17 277 4.0 6.5 5.2 2.7 292 chr2L 21684297 intron CG31619 + chr2L 21684443 intron CG31619 + chr2L 21684589 5` UTR CG31619 + chr2L_17_21680001 chr2L_21680001 RAL-392 564 chr2L 21685773 21685810 chr2L 21685865 21685886 7 91 2.0 5.0 3.5 1.6 113 chr2L 21685773 intron CG31619 + chr2L 21685830 intron CG31619 + chr2L 21685886 intron CG31619 + chr2L_7_21685001 chr2L_21685001 RAL-392 565 chr2L 21691818 21691853 chr2L 21698298 21698329 Burdock 8 6478 12.5 3.0 7.8 0.9 6511 chr2L 21691818 intron CG31619 + chr2L 21695074 intron CG31619 + chr2L 21698329 intron CG31619 + chr2L_8_21695001 chr2L_21695001 RAL-392 566 chr2L 21750081 21750135 chr2L 21750421 21750478 20 340 3.0 2.0 2.5 5.7 397 chr2L 21750081 intron step - chr2L 21750280 intron step - chr2L 21750478 intron step - chr2L_20_21750001 chr2L_21750001 RAL-392 567 chr2L 21754640 21754688 chr2L 21754741 21754789 23 98 5.0 6.5 5.8 3.4 149 chr2L 21754640 intron step - chr2L 21754714 intron step - chr2L 21754789 intron step - chr2L_23_21750001 chr2L_21750001 RAL-392 568 chr2L 21771964 21772013 chr2L 21772063 21772112 12 90 1.5 3.0 2.2 3.8 148 chr2L 21771964 intron CG31612 - chr2L 21772038 intron CG31612 - chr2L 21772112 intron CG31612 - chr2L_12_21770001 chr2L_21770001 RAL-392 569 chr2L 21967002 21967005 chr2L 21967124 21967132 7 131 5.0 8.5 6.8 0.9 130 chr2L 21967002 intergenic not near genes chr2L 21967067 intergenic not near genes chr2L 21967132 intergenic not near genes chr2L_7_21965001 chr2L_21965001 RAL-392 570 chr2L 21967007 21967026 chr2L 21967121 21967150 16 129 4.0 7.5 5.8 2.4 143 chr2L 21967007 intergenic not near genes chr2L 21967078 intergenic not near genes chr2L 21967150 intergenic not near genes chr2L_16_21965001 chr2L_21965001 RAL-392 571 chr2L 21981665 21981712 chr2L 21990850 21990886 roo 16 9180 3.5 6.5 5.0 2.7 9221 chr2L 21981665 exon CG2528 - chr2L 21986276 intron CG2528 - chr2L 21990886 exon CG2528 - chr2L_16_21985001 chr2L_21985001 RAL-392 572 chr2L 21996929 21996973 chr2L 21997030 21997074 10 96 3.0 4.5 3.8 2.1 145 chr2L 21996929 intergenic not near genes chr2L 21997002 intergenic not near genes chr2L 21997074 intergenic not near genes chr2L_10_21995001 chr2L_21995001 RAL-392 573 chr2L 22001633 22001671 chr2L 22001724 22001766 13 85 5.0 6.0 5.5 2.0 133 chr2L 22001633 intergenic not near genes chr2L 22001700 intergenic not near genes chr2L 22001766 intergenic not near genes chr2L_13_22000001 chr2L_22000001 RAL-392 574 chr2L 22025810 22025823 chr2L 22025909 22025922 6 99 17.0 6.5 11.8 0.5 112 chr2L 22025810 intergenic tio + chr2L 22025866 intergenic tio + chr2L 22025922 intergenic tio + chr2L_6_22025001 chr2L_22025001 RAL-392 575 chr2L 22025828 22025852 chr2L 22025907 22025951 6 92 10.0 6.5 8.2 0.7 123 chr2L 22025828 intergenic tio + chr2L 22025890 intergenic tio + chr2L 22025951 intergenic tio + chr2L_6_22025001 chr2L_22025001 RAL-392 576 chr2L 22047237 22047243 chr2L 22047382 22047388 4 145 8.5 5.0 6.8 0.5 151 chr2L 22047237 intergenic not near genes chr2L 22047312 intergenic not near genes chr2L 22047388 intergenic not near genes chr2L_4_22045001 chr2L_22045001 RAL-392 577 chr2L 22191329 22191349 chr2L 22198313 22198355 7 6990 21.5 40.5 31.0 0.2 7026 chr2L 22191329 intron Ir40a - chr2L 22194842 intron Ir40a - chr2L 22198355 intron Ir40a - chr2L_7_22190001 chr2L_22190001 RAL-392 578 chr2L 22294340 22294364 chr2L 22294448 22294472 8 107 7.0 1.5 4.2 1.5 132 chr2L 22294340 intergenic not near genes chr2L 22294406 intergenic not near genes chr2L 22294472 intergenic not near genes chr2L_8_22290001 chr2L_22290001 RAL-392 579 chr2L 22294365 22294383 chr2L 22294446 22294481 4 98 4.0 1.5 2.8 1.1 116 chr2L 22294365 intergenic not near genes chr2L 22294423 intergenic not near genes chr2L 22294481 intergenic not near genes chr2L_4_22290001 chr2L_22290001 RAL-392 580 chr2L 22581951 22582001 chr2L 22583760 22583810 S-element 11 1807 4.5 8.5 6.5 1.5 1859 chr2L 22581951 intron CG17494 + chr2L 22582880 intron CG17494 + chr2L 22583810 intron CG17494 + chr2L_11_22580001 chr2L_22580001 RAL-392 581 chr2L 22776401 22776452 chr2L 22778209 22778261 S-element 18 1806 4.0 7.0 5.5 2.8 1860 chr2L 22776401 intergenic not near genes chr2L 22777331 intergenic not near genes chr2L 22778261 intergenic not near genes chr2L_18_22775001 chr2L_22775001 RAL-392 582 chr2L 22927813 22927837 chr2L 22928035 22928059 7 218 38.0 32.5 35.2 0.2 246 chr2L 22927813 intron lt + chr2L 22927936 intron lt + chr2L 22928059 intron lt + chr2L_7_22925001 chr2L_22925001 RAL-392 583 chr2R 529323 529356 chr2R 537946 537962 Max-element 5 8625 4.0 3.5 3.8 1.0 8639 chr2R 529323 intron CG40378 + chr2R 533642 intron CG40378 + chr2R 537962 intron CG40378 + chr2R_5_530001 chr2R_530001 RAL-392 584 chr2R 1071358 1071387 chr2R 1071446 1071492 6 100 7.0 7.0 7.0 0.8 134 chr2R 1071358 intergenic CR41257 - chr2R 1071425 intergenic CR41257 - chr2R 1071492 intergenic CR41257 -,rl + chr2R_6_1070001 chr2R_1070001 RAL-392 585 chr2R 1082372 1082384 chr2R 1087126 1087149 Doc 5 4766 2.0 5.0 3.5 1.1 4777 chr2R 1082372 intron rl + chr2R 1084760 intron rl + chr2R 1087149 intron rl + chr2R_5_1080001 chr2R_1080001 RAL-392 586 chr2R 1320204 1320204 chr2R 21358403 21358403 5 20038199 18.0 6.0 12.0 0.4 20038199 chr2R 1320204 intergenic not near genes chr2R 11339304 exon zetaTry - chr2R 21358403 intron cv-2 - chr2R_5_11335001 chr2R_11335001 RAL-392 587 chr2R 1516585 1516602 chr2R 1521333 1521349 1731 15 4747 29.0 15.5 22.2 0.6 4764 chr2R 1516585 exon Maf1 - chr2R 1518967 intron Maf1 - chr2R 1521349 5` UTR Maf1 - chr2R_15_1515001 chr2R_1515001 RAL-392 588 chr2R 2498980 2499014 chr2R 2508132 2508181 roo 13 9162 3.0 2.5 2.8 3.4 9201 chr2R 2498980 intron MFS17 - chr2R 2503580 intron MFS17 - chr2R 2508181 intron MFS17 - chr2R_13_2500001 chr2R_2500001 RAL-392 589 chr2R 2591521 2591570 chr2R 2594214 2594222 roo 7 2669 37.5 16.5 27.0 0.2 2701 chr2R 2591521 intergenic not near genes chr2R 2592872 intergenic not near genes chr2R 2594222 intergenic not near genes chr2R_7_2590001 chr2R_2590001 RAL-392 590 chr2R 3532606 3532643 chr2R 3536068 3536106 Doc 6 3463 3.0 6.0 4.5 1.1 3500 chr2R 3532606 intergenic not near genes chr2R 3534356 intergenic not near genes chr2R 3536106 intergenic not near genes chr2R_6_3530001 chr2R_3530001 RAL-392 591 chr2R 4518104 4518130 chr2R 4522241 4522269 10 4141 44.0 30.5 37.2 0.3 4165 chr2R 4518104 intergenic not near genes chr2R 4520186 intergenic not near genes chr2R 4522269 intergenic not near genes chr2R_10_4520001 chr2R_4520001 RAL-392 592 chr2R 4621296 4621346 chr2R 4621856 4621888 8 548 6.0 6.5 6.2 1.1 592 chr2R 4621296 3` UTR CR44101 - chr2R 4621592 3` UTR CR44101 - chr2R 4621888 3` UTR CR44101 - chr2R_8_4620001 chr2R_4620001 RAL-392 593 chr2R 4622942 4622984 chr2R 4624110 4624112 1360 9 1156 4.5 7.5 6.0 1.3 1170 chr2R 4622942 intergenic CR44101 - chr2R 4623527 intergenic not near genes chr2R 4624112 intergenic not near genes chr2R_9_4620001 chr2R_4620001 RAL-392 594 chr2R 4624632 4624659 chr2R 4626549 4626558 Bica 4 1910 13.5 6.5 10.0 0.4 1926 chr2R 4624632 intergenic not near genes chr2R 4625595 intergenic not near genes chr2R 4626558 intergenic not near genes chr2R_4_4625001 chr2R_4625001 RAL-392 595 chr2R 4624661 4624673 chr2R 4626548 4626598 Bica 6 1911 10.5 6.5 8.5 0.6 1937 chr2R 4624661 intergenic not near genes chr2R 4625630 intergenic not near genes chr2R 4626598 intergenic not near genes chr2R_6_4625001 chr2R_4625001 RAL-392 596 chr2R 4688101 4688130 chr2R 4688203 4688232 14 96 4.5 5.5 5.0 2.3 131 chr2R 4688101 intergenic not near genes chr2R 4688166 intergenic not near genes chr2R 4688232 intergenic not near genes chr2R_14_4685001 chr2R_4685001 RAL-392 597 chr2R 4750326 4750377 chr2R 4751496 4751548 1360 5 1162 3.5 4.0 3.8 1.0 1222 chr2R 4750326 intron conu + chr2R 4750937 intron conu + chr2R 4751548 intron conu + chr2R_5_4750001 chr2R_4750001 RAL-392 598 chr2R 4887603 4887643 chr2R 4887819 4887859 13 214 2.5 5.0 3.8 2.7 256 chr2R 4887603 intergenic not near genes chr2R 4887731 intergenic not near genes chr2R 4887859 intergenic not near genes chr2R_13_4885001 chr2R_4885001 RAL-392 599 chr2R 5075203 5075226 chr2R 5075351 5075374 8 145 8.0 0.0 4.0 1.6 171 chr2R 5075203 intergenic not near genes chr2R 5075288 intergenic not near genes chr2R 5075374 intergenic not near genes chr2R_8_5075001 chr2R_5075001 RAL-392 600 chr2R 5075246 5075372 chr2R 5075757 5075796 10 442 0.0 4.5 2.2 3.1 550 chr2R 5075246 intergenic not near genes chr2R 5075521 intergenic not near genes chr2R 5075796 intergenic not near genes chr2R_10_5075001 chr2R_5075001 RAL-392 601 chr2R 5256737 5256791 chr2R 5256845 5256867 27 102 8.5 9.5 9.0 2.7 130 chr2R 5256737 intergenic not near genes chr2R 5256802 intergenic not near genes chr2R 5256867 intergenic not near genes chr2R_27_5255001 chr2R_5255001 RAL-392 602 chr2R 5258543 5258578 chr2R 5262244 5262254 S-element 4 3688 25.5 9.5 17.5 0.2 3711 chr2R 5258543 intergenic d4 + chr2R 5260398 intron d4 + chr2R 5262254 intron d4 + chr2R_4_5260001 chr2R_5260001 RAL-392 603 chr2R 5302087 5302145 chr2R 5304215 5304269 8 2131 58.0 80.5 69.2 0.1 2182 chr2R 5302087 intergenic not near genes chr2R 5303178 intergenic not near genes chr2R 5304269 intergenic not near genes chr2R_8_5300001 chr2R_5300001 RAL-392 604 chr2R 5417979 5418027 chr2R 5420625 5420643 Burdock 21 2645 8.5 4.5 6.5 2.8 2664 chr2R 5417979 intron laccase2 + chr2R 5419311 intron laccase2 + chr2R 5420643 intron laccase2 + chr2R_21_5415001 chr2R_5415001 RAL-392 605 chr2R 5491659 5491696 chr2R 5491755 5491772 14 99 3.5 5.5 4.5 2.5 113 chr2R 5491659 intron CG30440 - chr2R 5491716 intron CG30440 - chr2R 5491772 intron CG30440 - chr2R_14_5490001 chr2R_5490001 RAL-392 606 chr2R 5543204 5543223 chr2R 5547278 5547327 invader1 4 4093 0.5 8.0 4.2 0.8 4123 chr2R 5543204 intron CG30438 + chr2R 5545266 intron CG30438 + chr2R 5547327 intron CG30438 + chr2R_4_5545001 chr2R_5545001 RAL-392 607 chr2R 5724972 5725021 chr2R 5725222 5725261 25 245 5.0 3.5 4.2 4.8 289 chr2R 5724972 intron ap - chr2R 5725116 intron ap - chr2R 5725261 intron ap - chr2R_25_5725001 chr2R_5725001 RAL-392 608 chr2R 5750429 5750454 chr2R 5750541 5750566 7 109 7.5 5.5 6.5 0.9 137 chr2R 5750429 intergenic not near genes chr2R 5750498 intergenic not near genes chr2R 5750566 intergenic not near genes chr2R_7_5750001 chr2R_5750001 RAL-392 609 chr2R 5772547 5772548 chr2R 5772629 5772662 5 96 2.0 4.0 3.0 1.2 115 chr2R 5772547 3` UTR Gp210 + chr2R 5772604 3` UTR Gp210 + chr2R 5772662 3` UTR Gp210 + chr2R_5_5770001 chr2R_5770001 RAL-392 610 chr2R 5772549 5772825 chr2R 5772623 5772922 7 98 6.5 3.5 5.0 1.2 373 chr2R 5772549 3` UTR Gp210 + chr2R 5772736 3` UTR Gp210 + chr2R 5772922 3` UTR Gp210 + chr2R_7_5770001 chr2R_5770001 RAL-392 611 chr2R 5772828 5772856 chr2R 5772920 5772958 13 100 3.5 5.0 4.2 2.5 130 chr2R 5772828 3` UTR Gp210 + chr2R 5772893 3` UTR Gp210 + chr2R 5772958 3` UTR Gp210 + chr2R_13_5770001 chr2R_5770001 RAL-392 612 chr2R 5790446 5790495 chr2R 5790551 5790600 22 103 3.0 4.0 3.5 4.9 154 chr2R 5790446 intergenic not near genes chr2R 5790523 intergenic not near genes chr2R 5790600 intergenic not near genes chr2R_22_5790001 chr2R_5790001 RAL-392 613 chr2R 5834086 5834124 chr2R 5834265 5834311 8 178 3.0 5.5 4.2 1.5 225 chr2R 5834086 intron dpr12 + chr2R 5834198 intron dpr12 + chr2R 5834311 intron dpr12 + chr2R_8_5830001 chr2R_5830001 RAL-392 614 chr2R 5869256 5869306 chr2R 5874352 5874402 flea 22 5086 10.0 8.0 9.0 2.2 5146 chr2R 5869256 intergenic not near genes chr2R 5871829 intergenic not near genes chr2R 5874402 intergenic not near genes chr2R_22_5870001 chr2R_5870001 RAL-392 615 chr2R 5878906 5878928 chr2R 5879006 5879022 6 99 10.5 9.0 9.8 0.6 116 chr2R 5878906 intergenic CG44438 - chr2R 5878964 intergenic CG44438 - chr2R 5879022 intergenic CG44438 - chr2R_6_5875001 chr2R_5875001 RAL-392 616 chr2R 5878929 5878958 chr2R 5879003 5879053 8 93 5.0 8.0 6.5 1.1 124 chr2R 5878929 intergenic CG44438 - chr2R 5878991 intergenic CG44438 - chr2R 5879053 intergenic CG44438 - chr2R_8_5875001 chr2R_5875001 RAL-392 617 chr2R 5879359 5879379 chr2R 5879539 5879573 6 191 8.0 1.5 4.8 1.0 214 chr2R 5879359 3` UTR CG44438 - chr2R 5879466 3` UTR CG44438 - chr2R 5879573 exon CG44438 - chr2R_6_5875001 chr2R_5875001 RAL-392 618 chr2R 5902155 5902188 chr2R 5909714 5909732 17.6 7 7567 2.5 2.0 2.2 2.2 7577 chr2R 5902155 intron CG43366 + chr2R 5905944 intron CG43366 + chr2R 5909732 intron CG43366 + chr2R_7_5905001 chr2R_5905001 RAL-392 619 chr2R 5947920 5947946 chr2R 5948091 5948117 7 169 5.0 1.0 3.0 1.8 197 chr2R 5947920 intergenic not near genes chr2R 5948018 intergenic not near genes chr2R 5948117 intergenic not near genes chr2R_7_5945001 chr2R_5945001 RAL-392 620 chr2R 5947949 5947963 chr2R 5948089 5948116 5 152 3.5 1.0 2.2 1.6 167 chr2R 5947949 intergenic not near genes chr2R 5948032 intergenic not near genes chr2R 5948116 intergenic not near genes chr2R_5_5945001 chr2R_5945001 RAL-392 621 chr2R 5964933 5964953 chr2R 5965024 5965051 6 95 11.0 4.5 7.8 0.7 118 chr2R 5964933 intron CG7881 - chr2R 5964992 intron CG7881 - chr2R 5965051 intron CG7881 - chr2R_6_5960001 chr2R_5960001 RAL-392 622 chr2R 6088355 6088385 chr2R 6088463 6088487 9 106 6.0 6.0 6.0 1.3 132 chr2R 6088355 intergenic not near genes chr2R 6088421 intergenic not near genes chr2R 6088487 intergenic not near genes chr2R_9_6085001 chr2R_6085001 RAL-392 623 chr2R 6129325 6129356 chr2R 6129402 6129454 10 94 4.0 5.0 4.5 1.8 129 chr2R 6129325 intron EcR - chr2R 6129390 intron EcR - chr2R 6129454 intron EcR - chr2R_10_6125001 chr2R_6125001 RAL-392 624 chr2R 6152966 6152995 chr2R 6153115 6153145 13 149 2.5 0.5 1.5 5.2 179 chr2R 6152966 intron EcR - chr2R 6153056 intron EcR - chr2R 6153145 intron EcR - chr2R_13_6150001 chr2R_6150001 RAL-392 625 chr2R 6178100 6178131 chr2R 6178246 6178277 12 146 5.5 1.0 3.2 2.9 177 chr2R 6178100 intergenic not near genes chr2R 6178188 intergenic not near genes chr2R 6178277 intergenic not near genes chr2R_12_6175001 chr2R_6175001 RAL-392 626 chr2R 6178672 6178712 chr2R 6178768 6178803 13 102 3.0 1.5 2.2 4.1 131 chr2R 6178672 intergenic not near genes chr2R 6178738 intergenic not near genes chr2R 6178803 intergenic not near genes chr2R_13_6175001 chr2R_6175001 RAL-392 627 chr2R 6494533 6494553 chr2R 6499287 6499335 F-element 7 4769 4.0 0.5 2.2 2.2 4802 chr2R 6494533 intergenic not near genes chr2R 6496934 intergenic not near genes chr2R 6499335 intergenic not near genes chr2R_7_6495001 chr2R_6495001 RAL-392 628 chr2R 6546697 6546748 chr2R 6546818 6546866 25 116 8.0 4.0 6.0 3.6 169 chr2R 6546697 intron jing + chr2R 6546782 intron jing + chr2R 6546866 intron jing + chr2R_25_6545001 chr2R_6545001 RAL-392 629 chr2R 6579796 6579800 chr2R 6584903 6584906 flea 4 5107 3.5 9.0 6.2 0.6 5110 chr2R 6579796 intron jing + chr2R 6582351 intron jing + chr2R 6584906 intron jing + chr2R_4_6580001 chr2R_6580001 RAL-392 630 chr2R 6664164 6664210 chr2R 6665970 6666016 S-element 17 1801 3.0 2.5 2.8 4.5 1852 chr2R 6664164 intron,3` UTR Adf1 +,CR45128 - chr2R 6665090 intron Adf1 + chr2R 6666016 intron Adf1 + chr2R_17_6665001 chr2R_6665001 RAL-392 631 chr2R 6711725 6711757 chr2R 6711829 6711866 12 106 8.5 3.5 6.0 1.7 141 chr2R 6711725 intron,intron CG3409 -,CG45092 - chr2R 6711796 intron,intron CG3409 -,CG45092 - chr2R 6711866 intron,intron CG3409 -,CG45092 - chr2R_12_6710001 chr2R_6710001 RAL-392 632 chr2R 6741477 6741523 chr2R 6741575 6741586 11 85 6.0 4.0 5.0 1.8 109 chr2R 6741477 intergenic phtf + chr2R 6741532 intergenic phtf + chr2R 6741586 intergenic phtf + chr2R_11_6740001 chr2R_6740001 RAL-392 633 chr2R 6932767 6932813 chr2R 6932864 6932865 5 83 0.5 1.0 0.8 2.8 98 chr2R 6932767 intron mim - chr2R 6932816 intron mim - chr2R 6932865 intron mim - chr2R_5_6930001 chr2R_6930001 RAL-392 634 chr2R 6952169 6952185 chr2R 6959779 6959795 opus 5 7608 3.0 6.5 4.8 0.9 7626 chr2R 6952169 intron,intron mim -,CheB42c - chr2R 6955982 intron,intron mim -,CheB42c - chr2R 6959795 intron,intron mim -,CheB42c - chr2R_5_6955001 chr2R_6955001 RAL-392 635 chr2R 6964264 6964315 chr2R 6964360 6964412 15 94 6.0 6.0 6.0 2.1 148 chr2R 6964264 intron,intron mim -,CheB42c - chr2R 6964338 intron,intron mim -,CheB42c - chr2R 6964412 intron,intron mim -,CheB42c - chr2R_15_6960001 chr2R_6960001 RAL-392 636 chr2R 6978618 6978664 chr2R 6978821 6978854 18 198 3.0 5.0 4.0 3.6 236 chr2R 6978618 intron vimar - chr2R 6978736 intron vimar - chr2R 6978854 intron vimar - chr2R_18_6975001 chr2R_6975001 RAL-392 637 chr2R 7091190 7091240 chr2R 7091291 7091342 27 101 7.0 5.5 6.2 3.8 152 chr2R 7091190 intron esn + chr2R 7091266 intron esn + chr2R 7091342 intron esn + chr2R_27_7090001 chr2R_7090001 RAL-392 638 chr2R 7171256 7171273 chr2R 7171361 7171374 4 104 7.5 12.5 10.0 0.4 118 chr2R 7171256 intron pk + chr2R 7171315 intron pk + chr2R 7171374 intron pk + chr2R_4_7170001 chr2R_7170001 RAL-392 639 chr2R 7196554 7196596 chr2R 7201349 7201384 F-element 13 4794 4.5 8.0 6.2 1.8 4830 chr2R 7196554 intron pk + chr2R 7198969 intron pk + chr2R 7201384 intron pk + chr2R_13_7195001 chr2R_7195001 RAL-392 640 chr2R 7209844 7209873 chr2R 7217593 7217654 roo 6 7766 0.0 1.0 0.5 4.0 7810 chr2R 7209844 intron pk + chr2R 7213749 intron pk + chr2R 7217654 intron pk + chr2R_6_7210001 chr2R_7210001 RAL-392 641 chr2R 7243370 7243393 chr2R 7247771 7247794 10 4401 37.5 32.0 34.8 0.3 4424 chr2R 7243370 3` UTR Ady43A - chr2R 7245582 5` UTR Ady43A - chr2R 7247794 intergenic not near genes chr2R_10_7245001 chr2R_7245001 RAL-392 642 chr2R 7417883 7418168 chr2R 7417989 7418267 16 94 7.0 11.0 9.0 1.6 384 chr2R 7417883 intergenic not near genes chr2R 7418075 intergenic not near genes chr2R 7418267 intergenic not near genes chr2R_16_7415001 chr2R_7415001 RAL-392 643 chr2R 7434885 7434910 chr2R 7439205 7439231 Juan 10 4321 6.5 10.5 8.5 1.1 4346 chr2R 7434885 intergenic so + chr2R 7437058 intergenic not near genes chr2R 7439231 intergenic not near genes chr2R_10_7435001 chr2R_7435001 RAL-392 644 chr2R 7450189 7450227 chr2R 7450284 7450337 12 103 6.5 10.0 8.2 1.3 148 chr2R 7450189 intron fa2h - chr2R 7450263 intron fa2h - chr2R 7450337 intron fa2h - chr2R_12_7450001 chr2R_7450001 RAL-392 645 chr2R 7608403 7608446 chr2R 7613609 7613664 I-element 10 5211 4.5 1.5 3.0 2.5 5261 chr2R 7608403 intron CG1358 - chr2R 7611034 intron CG1358 - chr2R 7613664 intron CG1358 - chr2R_10_7610001 chr2R_7610001 RAL-392 646 chr2R 7636835 7636871 chr2R 7637503 7637518 7 654 2.5 0.5 1.5 2.8 683 chr2R 7636835 intron CG43340 + chr2R 7637176 intron CG43340 + chr2R 7637518 intron CG43340 + chr2R_7_7635001 chr2R_7635001 RAL-392 647 chr2R 7692009 7692038 chr2R 7692103 7692139 5 98 0.5 4.5 2.5 1.4 130 chr2R 7692009 intron CG1399 - chr2R 7692074 intron CG1399 - chr2R 7692139 intron CG1399 - chr2R_5_7690001 chr2R_7690001 RAL-392 648 chr2R 7694573 7694605 chr2R 7694677 7694709 4 104 5.5 8.5 7.0 0.5 136 chr2R 7694573 intron CG1399 - chr2R 7694641 intron CG1399 - chr2R 7694709 intron CG1399 - chr2R_4_7690001 chr2R_7690001 RAL-392 649 chr2R 7714071 7714106 chr2R 7714155 7714166 11 88 10.5 4.5 7.5 1.3 95 chr2R 7714071 exon CG1942 + chr2R 7714118 exon CG1942 + chr2R 7714166 3` UTR CG1942 + chr2R_11_7710001 chr2R_7710001 RAL-392 650 chr2R 7730072 7730117 chr2R 7730172 7730211 11 99 1.5 3.0 2.2 3.4 139 chr2R 7730072 intron CG18812 - chr2R 7730142 intron CG18812 - chr2R 7730211 intron CG18812 - chr2R_11_7730001 chr2R_7730001 RAL-392 651 chr2R 7787065 7787115 chr2R 7787167 7787215 22 100 6.5 1.5 4.0 4.4 150 chr2R 7787065 intron CanB2 + chr2R 7787140 intron CanB2 + chr2R 7787215 intron CanB2 + chr2R_22_7785001 chr2R_7785001 RAL-392 652 chr2R 7815659 7815676 chr2R 7822148 7822165 Burdock 4 6488 9.0 5.0 7.0 0.5 6506 chr2R 7815659 intergenic CG1882 + chr2R 7818912 intergenic not near genes chr2R 7822165 3` UTR cathD - chr2R_4_7815001 chr2R_7815001 RAL-392 653 chr2R 7815680 7815701 chr2R 7822142 7822170 Burdock 9 6478 4.5 3.5 4.0 1.8 6490 chr2R 7815680 intergenic CG1882 + chr2R 7818925 intergenic not near genes chr2R 7822170 3` UTR cathD - chr2R_9_7815001 chr2R_7815001 RAL-392 654 chr2R 7851258 7851275 chr2R 7851344 7851359 4 88 3.5 3.5 3.5 0.9 101 chr2R 7851258 intron Dgk - chr2R 7851308 intron Dgk - chr2R 7851359 intron Dgk - chr2R_4_7850001 chr2R_7850001 RAL-392 655 chr2R 7869177 7869203 chr2R 7873977 7873982 Doc 9 4797 6.5 4.5 5.5 1.4 4805 chr2R 7869177 intron Dgk - chr2R 7871580 intron Dgk - chr2R 7873982 intron Dgk - chr2R_9_7870001 chr2R_7870001 RAL-392 656 chr2R 8006833 8006840 chr2R 8007012 8007019 4 178 17.5 8.5 13.0 0.3 186 chr2R 8006833 intergenic Odc1 +,Odc2 + chr2R 8006926 intergenic Odc1 +,Odc2 + chr2R 8007019 intergenic Odc2 +,Odc1 + chr2R_4_8005001 chr2R_8005001 RAL-392 657 chr2R 8006850 8006880 chr2R 8007005 8007034 17 172 5.0 7.5 6.2 2.4 184 chr2R 8006850 intergenic Odc1 +,Odc2 + chr2R 8006942 intergenic Odc1 +,Odc2 + chr2R 8007034 intergenic Odc2 +,Odc1 + chr2R_17_8005001 chr2R_8005001 RAL-392 658 chr2R 8008842 8008888 chr2R 8008961 8009002 8 108 1.5 4.5 3.0 2.0 160 chr2R 8008842 intron Odc2 + chr2R 8008922 exon Odc2 + chr2R 8009002 3` UTR Odc2 + chr2R_8_8005001 chr2R_8005001 RAL-392 659 chr2R 8008889 8008893 chr2R 8008960 8009012 5 103 1.5 4.5 3.0 1.2 123 chr2R 8008889 exon Odc2 + chr2R 8008950 exon Odc2 + chr2R 8009012 3` UTR Odc2 + chr2R_5_8005001 chr2R_8005001 RAL-392 660 chr2R 8014112 8014145 chr2R 8014203 8014208 5 78 7.0 10.0 8.5 0.5 96 chr2R 8014112 intergenic CG14762 - chr2R 8014160 intergenic CG14762 - chr2R 8014208 intergenic CG14762 - chr2R_5_8010001 chr2R_8010001 RAL-392 661 chr2R 8049580 8049597 chr2R 8049732 8049749 6 152 2.5 11.0 6.8 0.8 169 chr2R 8049580 intergenic not near genes chr2R 8049664 intergenic not near genes chr2R 8049749 intergenic not near genes chr2R_6_8045001 chr2R_8045001 RAL-392 662 chr2R 8067043 8067098 chr2R 8067147 8067185 22 99 4.5 8.0 6.2 3.1 142 chr2R 8067043 intron CG17977 - chr2R 8067114 intron CG17977 - chr2R 8067185 exon CG17977 - chr2R_22_8065001 chr2R_8065001 RAL-392 663 chr2R 8076668 8076693 chr2R 8076762 8076788 11 96 11.0 5.5 8.2 1.2 120 chr2R 8076668 intron lig + chr2R 8076728 intron lig + chr2R 8076788 intron lig + chr2R_11_8075001 chr2R_8075001 RAL-392 664 chr2R 8076695 8076709 chr2R 8076760 8076809 9 96 6.0 5.5 5.8 1.3 114 chr2R 8076695 intron lig + chr2R 8076752 intron lig + chr2R 8076809 intron lig + chr2R_9_8075001 chr2R_8075001 RAL-392 665 chr2R 8089241 8089286 chr2R 8089341 8089392 15 103 5.5 10.0 7.8 1.7 151 chr2R 8089241 3` UTR sut2 + chr2R 8089316 intergenic sut2 +,sut3 + chr2R 8089392 intergenic sut3 +,sut2 + chr2R_15_8085001 chr2R_8085001 RAL-392 666 chr2R 8105914 8105961 chr2R 8106025 8106072 8 102 5.0 5.5 5.2 1.3 158 chr2R 8105914 5` UTR Cul4 - chr2R 8105993 intron Cul4 - chr2R 8106072 5` UTR Cul4 - chr2R_8_8105001 chr2R_8105001 RAL-392 667 chr2R 8160915 8160953 chr2R 8161025 8161031 12 102 4.5 8.5 6.5 1.6 116 chr2R 8160915 exon CG8708 - chr2R 8160973 intron CG8708 - chr2R 8161031 intron CG8708 - chr2R_12_8160001 chr2R_8160001 RAL-392 668 chr2R 8236020 8236054 chr2R 8236121 8236154 7 100 1.5 1.0 1.2 3.2 134 chr2R 8236020 intergenic not near genes chr2R 8236087 intergenic not near genes chr2R 8236154 intergenic not near genes chr2R_7_8235001 chr2R_8235001 RAL-392 669 chr2R 8249567 8249590 chr2R 8249649 8249662 7 86 3.0 5.5 4.2 1.3 95 chr2R 8249567 5` UTR CG44439 - chr2R 8249614 intergenic CG44439 - chr2R 8249662 intergenic CG44439 - chr2R_7_8245001 chr2R_8245001 RAL-392 670 chr2R 8297411 8297454 chr2R 8297510 8297540 22 96 6.0 5.5 5.8 3.2 129 chr2R 8297411 intergenic not near genes chr2R 8297476 intergenic not near genes chr2R 8297540 intergenic not near genes chr2R_22_8295001 chr2R_8295001 RAL-392 671 chr2R 8330853 8330889 chr2R 8331348 8331395 roo 14 496 5.0 7.0 6.0 2.0 542 chr2R 8330853 intron pdm3 + chr2R 8331124 intron pdm3 + chr2R 8331395 intron pdm3 + chr2R_14_8330001 chr2R_8330001 RAL-392 672 chr2R 8561307 8561347 chr2R 8561654 8561676 7 336 4.0 5.5 4.8 1.2 369 chr2R 8561307 intergenic not near genes chr2R 8561492 intergenic not near genes chr2R 8561676 intergenic not near genes chr2R_7_8560001 chr2R_8560001 RAL-392 673 chr2R 8612560 8612609 chr2R 8612657 8612706 16 95 8.5 8.0 8.2 1.7 146 chr2R 8612560 intron CG8642 - chr2R 8612633 intron CG8642 - chr2R 8612706 intron CG8642 - chr2R_16_8610001 chr2R_8610001 RAL-392 674 chr2R 8627735 8627741 chr2R 8627834 8627840 4 99 11.0 3.5 7.2 0.5 105 chr2R 8627735 intergenic beta3GalTII -,CG14749 + chr2R 8627788 intergenic CG14749 +,beta3GalTII - chr2R 8627840 intergenic CG14749 +,beta3GalTII - chr2R_4_8625001 chr2R_8625001 RAL-392 675 chr2R 8691104 8691140 chr2R 8691593 8691619 12 487 5.5 3.5 4.5 2.2 515 chr2R 8691104 intergenic Jon44E + chr2R 8691362 intergenic Jon44E + chr2R 8691619 exon Jon44E + chr2R_12_8690001 chr2R_8690001 RAL-392 676 chr2R 8722758 8722794 chr2R 8723004 8723035 pogo 8 245 6.0 7.0 6.5 1.1 277 chr2R 8722758 intron CG14767 - chr2R 8722896 intron CG14767 - chr2R 8723035 intron CG14767 - chr2R_8_8720001 chr2R_8720001 RAL-392 677 chr2R 8777903 8777944 chr2R 8784127 8784150 diver 7 6218 2.5 5.0 3.8 1.5 6247 chr2R 8777903 intergenic not near genes chr2R 8781026 intergenic not near genes chr2R 8784150 intergenic not near genes chr2R_7_8780001 chr2R_8780001 RAL-392 678 chr2R 8833413 8833426 chr2R 8833515 8833528 5 102 14.5 3.0 8.8 0.5 115 chr2R 8833413 intron sns + chr2R 8833470 intron sns + chr2R 8833528 intron sns + chr2R_5_8830001 chr2R_8830001 RAL-392 679 chr2R 8833427 8833449 chr2R 8833512 8833540 7 91 9.0 3.0 6.0 1.0 113 chr2R 8833427 intron sns + chr2R 8833484 intron sns + chr2R 8833540 intron sns + chr2R_7_8830001 chr2R_8830001 RAL-392 680 chr2R 9047422 9047438 chr2R 9047517 9047553 7 109 0.0 4.5 2.2 2.2 131 chr2R 9047422 intron CG13743 - chr2R 9047488 intron CG13743 - chr2R 9047553 intron CG13743 - chr2R_7_9045001 chr2R_9045001 RAL-392 681 chr2R 9052715 9052736 chr2R 9052806 9052830 4 96 3.5 5.0 4.2 0.8 115 chr2R 9052715 intron CG13743 - chr2R 9052772 intron CG13743 - chr2R 9052830 intron CG13743 - chr2R_4_9050001 chr2R_9050001 RAL-392 682 chr2R 9065894 9065913 chr2R 9065996 9066015 6 101 10.0 3.5 6.8 0.8 121 chr2R 9065894 intron ana + chr2R 9065954 intron ana + chr2R 9066015 intron ana + chr2R_6_9065001 chr2R_9065001 RAL-392 683 chr2R 9065923 9065946 chr2R 9065995 9066048 13 92 4.0 3.0 3.5 2.9 125 chr2R 9065923 intron ana + chr2R 9065986 intron ana + chr2R 9066048 intron ana + chr2R_13_9065001 chr2R_9065001 RAL-392 684 chr2R 9151280 9151333 chr2R 9157770 9157807 Burdock 30 6486 12.5 6.0 9.2 2.9 6527 chr2R 9151280 exon CG30345 + chr2R 9154544 intergenic not near genes chr2R 9157807 intergenic CG8008 - chr2R_30_9150001 chr2R_9150001 RAL-392 685 chr2R 9147918 9147948 chr2R 9160217 9160226 Burdock 8 12275 24.0 19.5 21.8 0.4 12308 chr2R 9147918 intron CG30344 + chr2R 9154072 intergenic not near genes chr2R 9160226 exon CG8008 - chr2R_8_9150001 chr2R_9150001 RAL-392 686 chr2R 9183126 9183157 chr2R 9183213 9183243 7 92 4.5 5.5 5.0 1.2 117 chr2R 9183126 intron ltd - chr2R 9183184 intron ltd - chr2R 9183243 intron ltd - chr2R_7_9180001 chr2R_9180001 RAL-392 687 chr2R 9212710 9212721 chr2R 9213179 9213201 roo 4 471 2.0 3.0 2.5 1.1 491 chr2R 9212710 intergenic CR45309 + chr2R 9212956 intergenic CR45309 + chr2R 9213201 5` UTR CR45309 + chr2R_4_9210001 chr2R_9210001 RAL-392 688 chr2R 9258415 9258423 chr2R 9258525 9258528 5 109 9.5 5.5 7.5 0.6 113 chr2R 9258415 intron Pkn - chr2R 9258472 intron Pkn - chr2R 9258528 intron Pkn - chr2R_5_9255001 chr2R_9255001 RAL-392 689 chr2R 9267962 9267999 chr2R 9268068 9268096 10 100 7.0 2.0 4.5 1.8 134 chr2R 9267962 exon Pkn - chr2R 9268029 intron Pkn - chr2R 9268096 intron Pkn - chr2R_10_9265001 chr2R_9265001 RAL-392 690 chr2R 9268001 9268006 chr2R 9268066 9268098 4 86 5.0 2.0 3.5 0.9 97 chr2R 9268001 intron Pkn - chr2R 9268050 intron Pkn - chr2R 9268098 intron Pkn - chr2R_4_9265001 chr2R_9265001 RAL-392 691 chr2R 9368118 9368151 chr2R 9368201 9368202 5 79 3.0 0.5 1.8 1.8 84 chr2R 9368118 intron CG13954 - chr2R 9368160 intron CG13954 - chr2R 9368202 intron CG13954 - chr2R_5_9365001 chr2R_9365001 RAL-392 692 chr2R 9379919 9379971 chr2R 9380015 9380030 14 84 1.0 3.5 2.2 4.4 111 chr2R 9379919 intron CG13954 - chr2R 9379974 intron CG13954 - chr2R 9380030 intron CG13954 - chr2R_14_9375001 chr2R_9375001 RAL-392 693 chr2R 9480057 9480105 chr2R 9490608 9490656 roo 8 10547 5.0 5.0 5.0 1.3 10599 chr2R 9480057 intergenic not near genes chr2R 9485356 intergenic not near genes chr2R 9490656 intergenic not near genes chr2R_8_9485001 chr2R_9485001 RAL-392 694 chr2R 9650944 9650956 chr2R 9651031 9651068 5 99 8.5 6.5 7.5 0.6 124 chr2R 9650944 intron Mmp2 - chr2R 9651006 intron Mmp2 - chr2R 9651068 intron Mmp2 - chr2R_5_9650001 chr2R_9650001 RAL-392 695 chr2R 9697247 9697256 chr2R 9697354 9697360 4 104 4.0 10.5 7.2 0.5 113 chr2R 9697247 intergenic not near genes chr2R 9697304 intergenic not near genes chr2R 9697360 intergenic not near genes chr2R_4_9695001 chr2R_9695001 RAL-392 696 chr2R 9697258 9697275 chr2R 9697331 9697375 9 100 3.0 5.5 4.2 1.7 117 chr2R 9697258 intergenic not near genes chr2R 9697316 intergenic not near genes chr2R 9697375 intergenic not near genes chr2R_9_9695001 chr2R_9695001 RAL-392 697 chr2R 9726598 9726608 chr2R 9734171 9734181 17.6 8 7573 10.0 8.0 9.0 0.8 7583 chr2R 9726598 intron sqa - chr2R 9730390 intron sqa - chr2R 9734181 intron sqa - chr2R_8_9730001 chr2R_9730001 RAL-392 698 chr2R 9726609 9726636 chr2R 9734169 9734209 17.6 12 7569 7.0 7.5 7.2 1.5 7600 chr2R 9726609 intron sqa - chr2R 9730409 intron sqa - chr2R 9734209 intron sqa - chr2R_12_9730001 chr2R_9730001 RAL-392 699 chr2R 9789066 9789129 chr2R 9789184 9789229 20 102 1.0 2.5 1.8 7.1 163 chr2R 9789066 intron,5` UTR CG1688 -,CR44208 + chr2R 9789148 intron,5` UTR CG1688 -,CR44208 + chr2R 9789229 intron,5` UTR CG1688 -,CR44208 + chr2R_20_9785001 chr2R_9785001 RAL-392 700 chr2R 9923865 9923888 chr2R 9923935 9923940 4 72 2.5 6.5 4.5 0.7 75 chr2R 9923865 intron Mef2 - chr2R 9923902 intron Mef2 - chr2R 9923940 intron Mef2 - chr2R_4_9920001 chr2R_9920001 RAL-392 701 chr2R 9945425 9945432 chr2R 9945641 9945648 BS 4 216 10.5 2.5 6.5 0.5 223 chr2R 9945425 intron Mef2 - chr2R 9945536 intron Mef2 - chr2R 9945648 intron Mef2 - chr2R_4_9945001 chr2R_9945001 RAL-392 702 chr2R 9945435 9945464 chr2R 9945640 9945679 BS 6 211 7.5 2.5 5.0 1.0 244 chr2R 9945435 intron Mef2 - chr2R 9945557 intron Mef2 - chr2R 9945679 intron Mef2 - chr2R_6_9945001 chr2R_9945001 RAL-392 703 chr2R 10005531 10005585 chr2R 10005659 10005713 31 125 6.5 4.5 5.5 4.8 182 chr2R 10005531 intron Pka-R2 - chr2R 10005622 intron Pka-R2 - chr2R 10005713 intron Pka-R2 - chr2R_31_10005001 chr2R_10005001 RAL-392 704 chr2R 10005838 10005843 chr2R 10007013 10007018 1360 5 1176 11.0 4.0 7.5 0.6 1180 chr2R 10005838 intron Pka-R2 - chr2R 10006428 intron Pka-R2 - chr2R 10007018 intron Pka-R2 - chr2R_5_10005001 chr2R_10005001 RAL-392 705 chr2R 10005846 10005880 chr2R 10007012 10007046 1360 14 1160 3.0 4.0 3.5 3.1 1200 chr2R 10005846 intron Pka-R2 - chr2R 10006446 intron Pka-R2 - chr2R 10007046 intron Pka-R2 - chr2R_14_10005001 chr2R_10005001 RAL-392 706 chr2R 10024975 10025033 chr2R 10025105 10025148 8 122 2.5 5.5 4.0 1.6 173 chr2R 10024975 intron Pka-R2 - chr2R 10025062 intron Pka-R2 - chr2R 10025148 intron Pka-R2 - chr2R_8_10025001 chr2R_10025001 RAL-392 707 chr2R 10047797 10047827 chr2R 10047900 10047930 7 101 4.5 5.5 5.0 1.2 133 chr2R 10047797 intron oys - chr2R 10047864 intron oys - chr2R 10047930 intron oys - chr2R_7_10045001 chr2R_10045001 RAL-392 708 chr2R 10132173 10132219 chr2R 10132273 10132308 10 95 2.5 4.0 3.2 2.4 135 chr2R 10132173 intron gem + chr2R 10132240 intron gem + chr2R 10132308 exon gem + chr2R_10_10130001 chr2R_10130001 RAL-392 709 chr2R 10176868 10176910 chr2R 10186046 10186097 roo 25 9177 7.5 8.0 7.8 2.8 9229 chr2R 10176868 intron KCNQ - chr2R 10181482 intron KCNQ - chr2R 10186097 intron KCNQ - chr2R_25_10180001 chr2R_10180001 RAL-392 710 chr2R 10189187 10189235 chr2R 10189285 10189333 8 96 5.0 12.0 8.5 0.8 146 chr2R 10189187 intron KCNQ - chr2R 10189260 intron KCNQ - chr2R 10189333 intron KCNQ - chr2R_8_10185001 chr2R_10185001 RAL-392 711 chr2R 10290096 10290142 chr2R 10290197 10290243 13 100 1.5 3.0 2.2 4.1 147 chr2R 10290096 intron CAP + chr2R 10290170 intron CAP + chr2R 10290243 intron CAP + chr2R_13_10290001 chr2R_10290001 RAL-392 712 chr2R 10300627 10300680 chr2R 10300741 10300796 20 111 2.0 0.0 1.0 10.0 169 chr2R 10300627 intron CAP + chr2R 10300712 intron CAP + chr2R 10300796 intron CAP + chr2R_20_10300001 chr2R_10300001 RAL-392 713 chr2R 10313310 10313333 chr2R 10313409 10313434 23 103 12.5 12.5 12.5 1.7 124 chr2R 10313310 intergenic not near genes chr2R 10313372 intergenic not near genes chr2R 10313434 intergenic Ndg + chr2R_23_10310001 chr2R_10310001 RAL-392 714 chr2R 10313334 10313353 chr2R 10313405 10313461 27 94 8.5 11.0 9.8 2.5 127 chr2R 10313334 intergenic not near genes chr2R 10313398 intergenic Ndg + chr2R 10313461 intergenic Ndg + chr2R_27_10310001 chr2R_10310001 RAL-392 715 chr2R 10352699 10352704 chr2R 10352756 10352797 5 82 0.5 4.0 2.2 1.6 98 chr2R 10352699 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352748 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352797 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_5_10350001 chr2R_10350001 RAL-392 716 chr2R 10390918 10390938 chr2R 10390992 10390994 9 88 1.5 4.0 2.8 2.4 76 chr2R 10390918 intron CG42732 - chr2R 10390956 intron CG42732 - chr2R 10390994 intron CG42732 - chr2R_9_10390001 chr2R_10390001 RAL-392 717 chr2R 10409042 10409084 chr2R 10409139 10409180 11 94 0.5 4.5 2.5 3.1 138 chr2R 10409042 intron CG42732 - chr2R 10409111 intron CG42732 - chr2R 10409180 intron,exon CG42732 -,CG33477 - chr2R_11_10405001 chr2R_10405001 RAL-392 718 chr2R 10411782 10411834 chr2R 10411884 10411935 11 99 3.0 4.5 3.8 2.3 153 chr2R 10411782 intron CG42732 - chr2R 10411858 intron CG42732 - chr2R 10411935 intron CG42732 - chr2R_11_10410001 chr2R_10410001 RAL-392 719 chr2R 10457289 10457322 chr2R 10457385 10457420 5 101 3.5 1.5 2.5 1.4 131 chr2R 10457289 intron,intron Galphao +,Cyp49a1 - chr2R 10457354 intron,intron Galphao +,Cyp49a1 - chr2R 10457420 intron,intron Galphao +,Cyp49a1 - chr2R_5_10455001 chr2R_10455001 RAL-392 720 chr2R 10477146 10477188 chr2R 10477506 10477518 10 355 1.5 0.5 1.0 5.0 372 chr2R 10477146 intron whd - chr2R 10477332 intron whd - chr2R 10477518 intron whd - chr2R_10_10475001 chr2R_10475001 RAL-392 721 chr2R 10562975 10563007 chr2R 10563063 10563100 4 90 1.0 0.0 0.5 2.7 125 chr2R 10562975 intron psq + chr2R 10563038 intron psq + chr2R 10563100 intron psq + chr2R_4_10560001 chr2R_10560001 RAL-392 722 chr2R 10563550 10563581 chr2R 10563632 10563681 6 84 1.5 4.5 3.0 1.5 131 chr2R 10563550 intron psq + chr2R 10563616 intron psq + chr2R 10563681 intron psq + chr2R_6_10560001 chr2R_10560001 RAL-392 723 chr2R 10574628 10574649 chr2R 10574715 10574736 7 95 9.5 8.5 9.0 0.7 108 chr2R 10574628 intron psq + chr2R 10574682 intron psq + chr2R 10574736 intron psq + chr2R_7_10570001 chr2R_10570001 RAL-392 724 chr2R 10582093 10582135 chr2R 10582208 10582250 13 112 4.0 1.0 2.5 3.7 157 chr2R 10582093 intron psq + chr2R 10582172 intron psq + chr2R 10582250 intron psq + chr2R_13_10580001 chr2R_10580001 RAL-392 725 chr2R 10622345 10622364 chr2R 10637127 10637134 mdg1 5 14781 3.5 8.5 6.0 0.7 14789 chr2R 10622345 intron CG11883 + chr2R 10629740 intron CG11883 + chr2R 10637134 intron CG11883 + chr2R_5_10625001 chr2R_10625001 RAL-392 726 chr2R 10644042 10644085 chr2R 10644140 10644183 14 97 5.0 1.0 3.0 3.5 141 chr2R 10644042 intron Git - chr2R 10644112 intron Git - chr2R 10644183 intron Git - chr2R_14_10640001 chr2R_10640001 RAL-392 727 chr2R 10790131 10790144 chr2R 10790234 10790236 5 104 7.5 4.0 5.8 0.7 105 chr2R 10790131 intron CG33144 - chr2R 10790184 intron CG33144 - chr2R 10790236 intron CG33144 - chr2R_5_10790001 chr2R_10790001 RAL-392 728 chr2R 10790151 10790173 chr2R 10790228 10790257 6 97 4.0 3.0 3.5 1.3 106 chr2R 10790151 intron CG33144 - chr2R 10790204 intron CG33144 - chr2R 10790257 intron CG33144 - chr2R_6_10790001 chr2R_10790001 RAL-392 729 chr2R 10794892 10794940 chr2R 10794990 10795038 22 97 7.0 5.5 6.2 3.1 146 chr2R 10794892 intron CG33144 - chr2R 10794965 intron CG33144 - chr2R 10795038 intron CG33144 - chr2R_22_10790001 chr2R_10790001 RAL-392 730 chr2R 10848313 10848320 chr2R 10848434 10848441 4 120 0.5 3.5 2.0 1.3 128 chr2R 10848313 intron CG30015 - chr2R 10848377 intron CG30015 - chr2R 10848441 intron CG30015 - chr2R_4_10845001 chr2R_10845001 RAL-392 731 chr2R 10865703 10865737 chr2R 10865821 10865855 8 115 6.0 4.0 5.0 1.3 152 chr2R 10865703 intron CG30015 - chr2R 10865779 intron CG30015 - chr2R 10865855 intron CG30015 - chr2R_8_10865001 chr2R_10865001 RAL-392 732 chr2R 10865740 10865756 chr2R 10865819 10865868 10 109 5.0 3.5 4.2 1.9 128 chr2R 10865740 intron CG30015 - chr2R 10865804 intron CG30015 - chr2R 10865868 intron CG30015 - chr2R_10_10865001 chr2R_10865001 RAL-392 733 chr2R 10909382 10909405 chr2R 10909514 10909522 13 131 6.0 2.5 4.2 2.5 140 chr2R 10909382 intergenic not near genes chr2R 10909452 intergenic Obp47a + chr2R 10909522 intergenic Obp47a + chr2R_13_10905001 chr2R_10905001 RAL-392 734 chr2R 10922777 10922788 chr2R 10922863 10922887 5 99 0.5 8.0 4.2 1.0 110 chr2R 10922777 intergenic not near genes chr2R 10922832 intergenic not near genes chr2R 10922887 intergenic not near genes chr2R_5_10920001 chr2R_10920001 RAL-392 735 chr2R 10937801 10937808 chr2R 10937949 10937966 8 152 2.0 6.5 4.2 1.5 165 chr2R 10937801 intergenic not near genes chr2R 10937884 intergenic not near genes chr2R 10937966 intergenic Spn47C - chr2R_8_10935001 chr2R_10935001 RAL-392 736 chr2R 10937809 10937830 chr2R 10937942 10937973 6 150 1.5 4.5 3.0 1.5 164 chr2R 10937809 intergenic not near genes chr2R 10937891 intergenic not near genes chr2R 10937973 intergenic Spn47C - chr2R_6_10935001 chr2R_10935001 RAL-392 737 chr2R 10947076 10947122 chr2R 10947180 10947220 6 99 6.5 0.0 3.2 1.4 144 chr2R 10947076 5` UTR CR45228 + chr2R 10947148 intergenic CR45228 + chr2R 10947220 intergenic CR45228 + chr2R_6_10945001 chr2R_10945001 RAL-392 738 chr2R 10959071 10959107 chr2R 10959170 10959206 9 93 4.5 1.5 3.0 2.2 135 chr2R 10959071 intergenic not near genes chr2R 10959138 intergenic not near genes chr2R 10959206 intergenic not near genes chr2R_9_10955001 chr2R_10955001 RAL-392 739 chr2R 11009804 11009824 chr2R 11018998 11019008 roo 4 9191 10.5 9.5 10.0 0.4 9204 chr2R 11009804 intron luna - chr2R 11014406 intron luna - chr2R 11019008 intron luna - chr2R_4_11010001 chr2R_11010001 RAL-392 740 chr2R 11009825 11009848 chr2R 11018987 11019029 roo 6 9166 2.0 7.0 4.5 1.1 9204 chr2R 11009825 intron luna - chr2R 11014427 intron luna - chr2R 11019029 intron luna - chr2R_6_11010001 chr2R_11010001 RAL-392 741 chr2R 11102855 11102896 chr2R 11102957 11102963 5 89 4.5 0.0 2.2 1.6 108 chr2R 11102855 intron luna - chr2R 11102909 intron luna - chr2R 11102963 intron luna - chr2R_5_11100001 chr2R_11100001 RAL-392 742 chr2R 11134090 11134138 chr2R 11134351 11134399 pogo 20 260 7.0 3.5 5.2 3.2 309 chr2R 11134090 intergenic not near genes chr2R 11134244 intergenic not near genes chr2R 11134399 intergenic not near genes chr2R_20_11130001 chr2R_11130001 RAL-392 743 chr2R 11152605 11152614 chr2R 11152711 11152714 5 105 13.5 9.0 11.2 0.4 109 chr2R 11152605 intron CG13229 - chr2R 11152660 intron CG13229 - chr2R 11152714 intron CG13229 - chr2R_5_11150001 chr2R_11150001 RAL-392 744 chr2R 11152620 11152631 chr2R 11152706 11152732 8 94 10.0 7.5 8.8 0.8 112 chr2R 11152620 intron CG13229 - chr2R 11152676 intron CG13229 - chr2R 11152732 intron CG13229 - chr2R_8_11150001 chr2R_11150001 RAL-392 745 chr2R 11161615 11161635 chr2R 11161937 11161951 8 320 14.0 5.0 9.5 0.8 336 chr2R 11161615 intron,intron CG13229 -,shn + chr2R 11161783 intron,intron CG13229 -,shn + chr2R 11161951 intron,intron CG13229 -,shn + chr2R_8_11160001 chr2R_11160001 RAL-392 746 chr2R 11161639 11161654 chr2R 11161931 11161951 5 310 8.0 4.5 6.2 0.7 312 chr2R 11161639 intron,intron CG13229 -,shn + chr2R 11161795 intron,intron CG13229 -,shn + chr2R 11161951 intron,intron CG13229 -,shn + chr2R_5_11160001 chr2R_11160001 RAL-392 747 chr2R 11179248 11179286 chr2R 11179354 11179367 16 94 6.0 7.0 6.5 2.1 119 chr2R 11179248 intron shn + chr2R 11179308 intron shn + chr2R 11179367 intron shn + chr2R_16_11175001 chr2R_11175001 RAL-392 748 chr2R 11207823 11207847 chr2R 11208013 11208024 BS 13 191 3.5 5.0 4.2 2.5 201 chr2R 11207823 intron shn + chr2R 11207924 intron shn + chr2R 11208024 intron shn + chr2R_13_11205001 chr2R_11205001 RAL-392 749 chr2R 11297630 11297639 chr2R 11301964 11301978 flea 6 4338 3.0 0.0 1.5 2.4 4348 chr2R 11297630 intergenic CG42336 - chr2R 11299804 intergenic not near genes chr2R 11301978 5` UTR CG7741 + chr2R_6_11295001 chr2R_11295001 RAL-392 750 chr2R 11423538 11423567 chr2R 11423637 11423665 5 95 4.5 4.5 4.5 0.9 127 chr2R 11423538 intron Drip - chr2R 11423602 intron Drip - chr2R 11423665 intron Drip - chr2R_5_11420001 chr2R_11420001 RAL-392 751 chr2R 11436607 11436618 chr2R 11436733 11436738 4 124 0.0 7.5 3.8 0.8 131 chr2R 11436607 intron CG7777 + chr2R 11436672 intron CG7777 + chr2R 11436738 intron CG7777 + chr2R_4_11435001 chr2R_11435001 RAL-392 752 chr2R 11472628 11472676 chr2R 11473845 11473892 pogo 12 1212 7.5 5.0 6.2 1.7 1264 chr2R 11472628 intergenic not near genes chr2R 11473260 intergenic not near genes chr2R 11473892 intergenic not near genes chr2R_12_11470001 chr2R_11470001 RAL-392 753 chr2R 11486141 11486154 chr2R 11486454 11486477 8 319 5.5 5.5 5.5 1.2 336 chr2R 11486141 intron inv + chr2R 11486309 intron inv + chr2R 11486477 intron inv + chr2R_8_11485001 chr2R_11485001 RAL-392 754 chr2R 11486159 11486186 chr2R 11486453 11486480 9 309 2.5 5.0 3.8 1.9 321 chr2R 11486159 intron inv + chr2R 11486320 intron inv + chr2R 11486480 intron inv + chr2R_9_11485001 chr2R_11485001 RAL-392 755 chr2R 11555381 11555419 chr2R 11555736 11555774 4 354 1.5 5.0 3.2 1.0 393 chr2R 11555381 intergenic not near genes chr2R 11555578 intergenic not near genes chr2R 11555774 intergenic not near genes chr2R_4_11555001 chr2R_11555001 RAL-392 756 chr2R 11636391 11636436 chr2R 11636489 11636498 4 75 4.5 2.0 3.2 1.0 107 chr2R 11636391 intron CG9005 - chr2R 11636444 intron CG9005 - chr2R 11636498 intron CG9005 - chr2R_4_11635001 chr2R_11635001 RAL-392 757 chr2R 11660351 11660399 chr2R 11660488 11660536 4 132 2.0 5.5 3.8 0.8 185 chr2R 11660351 intron Roc2 - chr2R 11660444 intron Roc2 - chr2R 11660536 intron Roc2 - chr2R_4_11660001 chr2R_11660001 RAL-392 758 chr2R 11673819 11673856 chr2R 11677357 11677372 5 3526 6.0 23.0 14.5 0.3 3553 chr2R 11673819 intron,exon Roc2 -,Tret1-1 + chr2R 11675596 intron Roc2 - chr2R 11677372 intron,exon Roc2 -,Tret1-2 + chr2R_5_11675001 chr2R_11675001 RAL-392 759 chr2R 11724141 11724151 chr2R 11724244 11724254 5 103 13.0 1.5 7.2 0.6 113 chr2R 11724141 intron pyr + chr2R 11724198 intron pyr + chr2R 11724254 intron pyr + chr2R_5_11720001 chr2R_11720001 RAL-392 760 chr2R 11822981 11822999 chr2R 11823058 11823090 4 83 0.0 1.0 0.5 2.7 109 chr2R 11822981 intergenic not near genes chr2R 11823036 intergenic not near genes chr2R 11823090 intergenic not near genes chr2R_4_11820001 chr2R_11820001 RAL-392 761 chr2R 12124812 12124860 chr2R 12124913 12124954 10 97 2.5 0.5 1.5 4.0 142 chr2R 12124812 intergenic not near genes chr2R 12124883 intergenic not near genes chr2R 12124954 intergenic not near genes chr2R_10_12120001 chr2R_12120001 RAL-392 762 chr2R 12185991 12186012 chr2R 12186101 12186127 13 113 22.5 15.5 19.0 0.7 136 chr2R 12185991 intron Cyp6g1 + chr2R 12186059 intron Cyp6g1 + chr2R 12186127 intron Cyp6g1 + chr2R_13_12185001 chr2R_12185001 RAL-392 763 chr2R 12186013 12186036 chr2R 12186098 12186150 10 100 9.5 14.0 11.8 0.8 137 chr2R 12186013 intron Cyp6g1 + chr2R 12186082 intron Cyp6g1 + chr2R 12186150 intron Cyp6g1 + chr2R_10_12185001 chr2R_12185001 RAL-392 764 chr2R 12185222 12185237 chr2R 12188129 12188142 5 2907 18.5 139.5 79.0 0.1 2920 chr2R 12185222 3` UTR,exon CG13175 +,CG33964 + chr2R 12186682 exon Cyp6g1 + chr2R 12188142 3` UTR Cyp6g1 + chr2R_5_12185001 chr2R_12185001 RAL-392 765 chr2R 12187475 12187477 chr2R 12190072 12190075 4 2597 49.0 54.5 51.8 0.1 2600 chr2R 12187475 exon Cyp6g1 + chr2R 12188775 exon Cyp6g2 - chr2R 12190075 exon Cyp6g2 - chr2R_4_12185001 chr2R_12185001 RAL-392 766 chr2R 12187474 12187496 chr2R 12190090 12190122 16 2626 64.5 52.5 58.5 0.3 2648 chr2R 12187474 exon Cyp6g1 + chr2R 12188798 exon Cyp6g2 - chr2R 12190122 exon Cyp6g2 - chr2R_16_12185001 chr2R_12185001 RAL-392 767 chr2R 12217581 12217600 chr2R 12217662 12217666 5 83 1.5 2.0 1.8 1.8 85 chr2R 12217581 intergenic not near genes chr2R 12217624 intergenic not near genes chr2R 12217666 intergenic not near genes chr2R_5_12215001 chr2R_12215001 RAL-392 768 chr2R 12272302 12272356 chr2R 12272405 12272449 16 99 4.0 6.0 5.0 2.7 147 chr2R 12272302 intron Cam + chr2R 12272376 intron Cam + chr2R 12272449 intron Cam + chr2R_16_12270001 chr2R_12270001 RAL-392 769 chr2R 12320707 12320731 chr2R 12320987 12320991 7 268 4.0 6.0 5.0 1.2 284 chr2R 12320707 3` UTR CR44316 - chr2R 12320849 intron CR44316 - chr2R 12320991 intergenic CR44316 -,CG13163 + chr2R_7_12320001 chr2R_12320001 RAL-392 770 chr2R 12334869 12334893 chr2R 12334967 12334971 6 93 5.0 4.0 4.5 1.1 102 chr2R 12334869 intergenic CG8490 + chr2R 12334920 intergenic CG8490 + chr2R 12334971 intergenic CG8490 + chr2R_6_12330001 chr2R_12330001 RAL-392 771 chr2R 12363371 12363411 chr2R 12363812 12363861 20 449 11.5 4.5 8.0 2.2 490 chr2R 12363371 intergenic CG30043 + chr2R 12363616 intergenic CG30043 + chr2R 12363861 intergenic not near genes chr2R_20_12360001 chr2R_12360001 RAL-392 772 chr2R 12417458 12417477 chr2R 12417548 12417553 4 84 3.5 10.0 6.8 0.5 95 chr2R 12417458 exon CG13157 + chr2R 12417506 exon CG13157 + chr2R 12417553 exon CG13157 + chr2R_4_12415001 chr2R_12415001 RAL-392 773 chr2R 12479115 12479157 chr2R 12479216 12479226 4 80 4.5 2.0 3.2 1.0 111 chr2R 12479115 intron Dh44-R2 + chr2R 12479170 intron Dh44-R2 + chr2R 12479226 intron Dh44-R2 + chr2R_4_12475001 chr2R_12475001 RAL-392 774 chr2R 12504165 12504178 chr2R 12504226 12504242 8 81 2.0 6.0 4.0 1.6 77 chr2R 12504165 intron fdl - chr2R 12504204 intron fdl - chr2R 12504242 intron fdl - chr2R_8_12500001 chr2R_12500001 RAL-392 775 chr2R 12565548 12565594 chr2R 12565945 12565952 14 376 0.0 5.5 2.8 3.7 404 chr2R 12565548 intergenic not near genes chr2R 12565750 intergenic Cyp301a1 + chr2R 12565952 intergenic Cyp301a1 + chr2R_14_12565001 chr2R_12565001 RAL-392 776 chr2R 12602787 12602835 chr2R 12602891 12602939 17 102 4.0 2.5 3.2 4.0 152 chr2R 12602787 intron Amph + chr2R 12602863 intron Amph + chr2R 12602939 intron Amph + chr2R_17_12600001 chr2R_12600001 RAL-392 777 chr2R 12643781 12643818 chr2R 12643873 12643893 7 86 4.5 2.5 3.5 1.6 112 chr2R 12643781 intron CG8785 - chr2R 12643837 intron CG8785 - chr2R 12643893 exon CG8785 - chr2R_7_12640001 chr2R_12640001 RAL-392 778 chr2R 12707509 12707548 chr2R 12715895 12715934 roo 13 8384 4.0 4.5 4.2 2.5 8425 chr2R 12707509 intron CG42663 + chr2R 12711722 intron CG42663 + chr2R 12715934 intron CG42663 + chr2R_13_12710001 chr2R_12710001 RAL-392 779 chr2R 12807857 12807884 chr2R 12807975 12807977 4 107 4.0 8.0 6.0 0.6 120 chr2R 12807857 intergenic CG17580 + chr2R 12807917 intergenic CG17580 + chr2R 12807977 intergenic CG17580 + chr2R_4_12805001 chr2R_12805001 RAL-392 780 chr2R 12819149 12819181 chr2R 12819290 12819321 5 140 0.0 0.5 0.2 4.2 172 chr2R 12819149 intergenic not near genes chr2R 12819235 intergenic not near genes chr2R 12819321 intergenic not near genes chr2R_5_12815001 chr2R_12815001 RAL-392 781 chr2R 12819426 12819466 chr2R 12824523 12824535 jockey 5 5090 3.5 4.5 4.0 1.0 5109 chr2R 12819426 intergenic not near genes chr2R 12821980 intergenic not near genes chr2R 12824535 intergenic not near genes chr2R_5_12820001 chr2R_12820001 RAL-392 782 chr2R 12834139 12834186 chr2R 12834242 12834289 24 102 7.0 8.0 7.5 2.8 150 chr2R 12834139 intergenic not near genes chr2R 12834214 intergenic not near genes chr2R 12834289 intergenic not near genes chr2R_24_12830001 chr2R_12830001 RAL-392 783 chr2R 12872161 12872169 chr2R 12872393 12872396 5 231 0.0 1.0 0.5 3.3 235 chr2R 12872161 intergenic bic + chr2R 12872278 intergenic CR43469 +,bic + chr2R 12872396 intergenic CR43469 +,CG3790 - chr2R_5_12870001 chr2R_12870001 RAL-392 784 chr2R 13043034 13043060 chr2R 13043134 13043149 4 97 0.0 5.5 2.8 1.1 115 chr2R 13043034 intergenic not near genes chr2R 13043092 intergenic not near genes chr2R 13043149 intergenic not near genes chr2R_4_13040001 chr2R_13040001 RAL-392 785 chr2R 13078744 13078774 chr2R 13078859 13078891 11 115 12.0 5.5 8.8 1.1 147 chr2R 13078744 intron Drl-2 - chr2R 13078818 intron Drl-2 - chr2R 13078891 intron Drl-2 - chr2R_11_13075001 chr2R_13075001 RAL-392 786 chr2R 13136823 13136848 chr2R 13141641 13141661 Doc 13 4817 6.0 2.5 4.2 2.5 4838 chr2R 13136823 exon Cap-G + chr2R 13139242 intron Cap-G + chr2R 13141661 intron Cap-G + chr2R_13_13135001 chr2R_13135001 RAL-392 787 chr2R 13136851 13136866 chr2R 13141637 13141669 Doc 6 4802 4.0 2.0 3.0 1.5 4818 chr2R 13136851 exon Cap-G + chr2R 13139260 intron Cap-G + chr2R 13141669 intron Cap-G + chr2R_6_13135001 chr2R_13135001 RAL-392 788 chr2R 13167414 13167459 chr2R 13167527 13167559 13 113 7.5 0.0 3.8 2.7 145 chr2R 13167414 intron GLaz - chr2R 13167486 intron GLaz - chr2R 13167559 intron GLaz - chr2R_13_13165001 chr2R_13165001 RAL-392 789 chr2R 13170700 13170743 chr2R 13170809 13170831 14 107 7.0 9.5 8.2 1.5 131 chr2R 13170700 3` UTR,3` UTR Spt-I +,CR45142 - chr2R 13170766 intergenic CR45142 -,Spt-I + chr2R 13170831 intergenic CR45142 -,Spt-I + chr2R_14_13170001 chr2R_13170001 RAL-392 790 chr2R 13241046 13241095 chr2R 13241163 13241197 5 105 4.0 3.5 3.8 1.0 151 chr2R 13241046 intergenic GstE14 + chr2R 13241122 intergenic GstE14 + chr2R 13241197 intergenic GstE14 + chr2R_5_13240001 chr2R_13240001 RAL-392 791 chr2R 13403914 13403925 chr2R 13404009 13404024 9 100 7.0 4.5 5.8 1.3 110 chr2R 13403914 intergenic not near genes chr2R 13403969 intergenic not near genes chr2R 13404024 intergenic not near genes chr2R_9_13400001 chr2R_13400001 RAL-392 792 chr2R 13431473 13431519 chr2R 13431569 13431618 13 96 5.0 6.0 5.5 2.0 145 chr2R 13431473 intron CG42321 - chr2R 13431546 intron CG42321 - chr2R 13431618 intron CG42321 - chr2R_13_13430001 chr2R_13430001 RAL-392 793 chr2R 13438863 13438872 chr2R 13440161 13440195 10 1308 23.5 42.5 33.0 0.3 1332 chr2R 13438863 5` UTR CG42321 - chr2R 13439529 3` UTR cnn - chr2R 13440195 exon cnn - chr2R_10_13435001 chr2R_13435001 RAL-392 794 chr2R 13464463 13464499 chr2R 13464614 13464648 7 149 8.0 11.0 9.5 0.7 185 chr2R 13464463 intron arr - chr2R 13464556 intron arr - chr2R 13464648 intron arr - chr2R_7_13460001 chr2R_13460001 RAL-392 795 chr2R 13480847 13480878 chr2R 13481075 13481096 6 235 1.0 2.0 1.5 2.4 249 chr2R 13480847 intron arr - chr2R 13480972 intron arr - chr2R 13481096 intron arr - chr2R_6_13480001 chr2R_13480001 RAL-392 796 chr2R 13566243 13566277 chr2R 13566343 13566367 5 96 8.5 0.0 4.2 1.0 124 chr2R 13566243 intergenic not near genes chr2R 13566305 intergenic not near genes chr2R 13566367 intergenic not near genes chr2R_5_13565001 chr2R_13565001 RAL-392 797 chr2R 13571535 13571554 chr2R 13571656 13571675 5 121 3.0 9.5 6.2 0.7 140 chr2R 13571535 3` UTR CG42807 - chr2R 13571605 3` UTR CG42807 - chr2R 13571675 exon CG42807 - chr2R_5_13570001 chr2R_13570001 RAL-392 798 chr2R 13580493 13580526 chr2R 13580850 13580861 jockey 5 357 0.5 2.5 1.5 2.0 368 chr2R 13580493 3` UTR CG6191 - chr2R 13580677 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580861 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_5_13580001 chr2R_13580001 RAL-392 799 chr2R 13702161 13702185 chr2R 13702244 13702284 5 93 8.0 6.5 7.2 0.6 123 chr2R 13702161 intron fas + chr2R 13702222 intron fas + chr2R 13702284 intron fas + chr2R_5_13700001 chr2R_13700001 RAL-392 800 chr2R 13709817 13709835 chr2R 13709944 13709953 4 124 2.0 7.5 4.8 0.7 136 chr2R 13709817 intron fas + chr2R 13709885 intron fas + chr2R 13709953 intron fas + chr2R_4_13705001 chr2R_13705001 RAL-392 801 chr2R 13728114 13728148 chr2R 13735795 13735829 opus 11 7681 3.5 7.0 5.2 1.8 7715 chr2R 13728114 intron fas + chr2R 13731972 intron fas + chr2R 13735829 intron fas + chr2R_11_13730001 chr2R_13730001 RAL-392 802 chr2R 13768962 13769008 chr2R 13769081 13769126 6 110 2.0 5.5 3.8 1.2 164 chr2R 13768962 intergenic not near genes chr2R 13769044 intergenic not near genes chr2R 13769126 intergenic not near genes chr2R_6_13765001 chr2R_13765001 RAL-392 803 chr2R 13790306 13790333 chr2R 13790402 13790421 6 93 6.5 0.0 3.2 1.4 115 chr2R 13790306 intergenic not near genes chr2R 13790364 intergenic not near genes chr2R 13790421 intergenic not near genes chr2R_6_13790001 chr2R_13790001 RAL-392 804 chr2R 13805326 13805340 chr2R 13805597 13805617 5 276 0.5 2.0 1.2 2.3 291 chr2R 13805326 intergenic Cpr50Cb +,stj + chr2R 13805472 intergenic Cpr50Cb +,stj + chr2R 13805617 intergenic stj +,Cpr50Cb + chr2R_5_13805001 chr2R_13805001 RAL-392 805 chr2R 13922606 13922648 chr2R 13922702 13922724 9 92 4.5 2.0 3.2 2.1 118 chr2R 13922606 intron shot - chr2R 13922665 intron shot - chr2R 13922724 intron shot - chr2R_9_13920001 chr2R_13920001 RAL-392 806 chr2R 14014952 14014985 chr2R 14015764 14015798 7 813 6.0 2.0 4.0 1.4 846 chr2R 14014952 intron mam + chr2R 14015375 intron mam + chr2R 14015798 intron mam + chr2R_7_14015001 chr2R_14015001 RAL-392 807 chr2R 14037284 14037299 chr2R 14037367 14037402 5 99 0.0 8.5 4.2 1.0 118 chr2R 14037284 intron mam + chr2R 14037343 intron mam + chr2R 14037402 intron mam + chr2R_5_14035001 chr2R_14035001 RAL-392 808 chr2R 14049108 14049127 chr2R 14049222 14049225 6 115 7.0 0.0 3.5 1.3 117 chr2R 14049108 intron mam + chr2R 14049166 intron mam + chr2R 14049225 intron mam + chr2R_6_14045001 chr2R_14045001 RAL-392 809 chr2R 14168356 14168396 chr2R 14168465 14168494 4 104 5.5 9.0 7.2 0.5 138 chr2R 14168356 intergenic CG18327 +,CG18324 +,CR44368 - chr2R 14168425 intergenic CG18327 +,CG18324 +,CR44368 - chr2R 14168494 intergenic CG18327 +,CG18324 +,CR44368 - chr2R_4_14165001 chr2R_14165001 RAL-392 810 chr2R 14252387 14252437 chr2R 14252497 14252547 4 108 3.5 5.0 4.2 0.8 160 chr2R 14252387 3` UTR Mdr50 + chr2R 14252467 3` UTR Mdr50 + chr2R 14252547 3` UTR Mdr50 + chr2R_4_14250001 chr2R_14250001 RAL-392 811 chr2R 14266740 14266793 chr2R 14266836 14266836 6 86 5.0 7.0 6.0 0.9 96 chr2R 14266740 intron CG8547 - chr2R 14266788 intron CG8547 - chr2R 14266836 intron CG8547 - chr2R_6_14265001 chr2R_14265001 RAL-392 812 chr2R 14285029 14285049 chr2R 14285141 14285166 11 115 3.0 5.0 4.0 2.2 137 chr2R 14285029 intron Ih + chr2R 14285098 intron Ih + chr2R 14285166 intron Ih + chr2R_11_14285001 chr2R_14285001 RAL-392 813 chr2R 14352690 14352712 chr2R 14352784 14352811 7 100 4.0 6.5 5.2 1.1 121 chr2R 14352690 exon CG8613 + chr2R 14352750 intron CG8613 + chr2R 14352811 intron CG8613 + chr2R_7_14350001 chr2R_14350001 RAL-392 814 chr2R 14357554 14357573 chr2R 14357655 14357679 11 104 12.0 9.0 10.5 1.0 125 chr2R 14357554 intergenic CG8617 -,Arc1 - chr2R 14357616 intergenic Arc1 -,CG8617 - chr2R 14357679 intergenic Arc1 -,CG8617 - chr2R_11_14355001 chr2R_14355001 RAL-392 815 chr2R 14357580 14357763 chr2R 14357651 14357899 11 125 7.0 7.5 7.2 1.3 319 chr2R 14357580 intergenic CG8617 -,Arc1 - chr2R 14357740 intergenic Arc1 -,CG8617 - chr2R 14357899 intergenic Arc1 - chr2R_11_14355001 chr2R_14355001 RAL-392 816 chr2R 14373494 14373531 chr2R 14373583 14373603 7 82 4.0 4.5 4.2 1.3 109 chr2R 14373494 exon Obp50d + chr2R 14373548 exon Obp50d + chr2R 14373603 exon Obp50d + chr2R_7_14370001 chr2R_14370001 RAL-392 817 chr2R 14400503 14400553 chr2R 14400602 14400634 18 92 5.0 5.5 5.2 2.9 131 chr2R 14400503 intergenic not near genes chr2R 14400568 intergenic not near genes chr2R 14400634 intergenic not near genes chr2R_18_14400001 chr2R_14400001 RAL-392 818 chr2R 14467302 14467326 chr2R 14476464 14476503 roo 7 9166 3.0 4.0 3.5 1.6 9201 chr2R 14467302 intergenic not near genes chr2R 14471902 intergenic not near genes chr2R 14476503 5` UTR CR44462 + chr2R_7_14470001 chr2R_14470001 RAL-392 819 chr2R 14497378 14497420 chr2R 14498550 14498591 1360 6 1176 0.0 4.5 2.2 1.9 1213 chr2R 14497378 3` UTR Cpsf160 - chr2R 14497984 intron Cpsf160 - chr2R 14498591 3` UTR Cpsf160 - chr2R_6_14495001 chr2R_14495001 RAL-392 820 chr2R 14514478 14514494 chr2R 14514581 14514623 7 114 8.5 6.5 7.5 0.8 145 chr2R 14514478 intron,intron Cpr51A -,CG30197 + chr2R 14514550 intron,intron Cpr51A -,CG30197 + chr2R 14514623 intron,intron Cpr51A -,CG30197 + chr2R_7_14510001 chr2R_14510001 RAL-392 821 chr2R 14517230 14517273 chr2R 14517382 14517420 14 149 1.0 5.5 3.2 3.3 190 chr2R 14517230 intergenic not near genes chr2R 14517325 intergenic not near genes chr2R 14517420 intergenic not near genes chr2R_14_14515001 chr2R_14515001 RAL-392 822 chr2R 14530348 14530376 chr2R 14530457 14530459 8 104 7.0 2.5 4.8 1.4 111 chr2R 14530348 intron ttv + chr2R 14530404 intron ttv + chr2R 14530459 intron ttv + chr2R_8_14530001 chr2R_14530001 RAL-392 823 chr2R 14542745 14542787 chr2R 14542857 14542870 5 102 1.0 3.5 2.2 1.6 125 chr2R 14542745 intron ttv + chr2R 14542808 intron ttv + chr2R 14542870 intron ttv + chr2R_5_14540001 chr2R_14540001 RAL-392 824 chr2R 14565540 14565571 chr2R 14565637 14565668 10 97 9.5 5.0 7.2 1.2 128 chr2R 14565540 intron ttv + chr2R 14565604 intron ttv + chr2R 14565668 intron ttv + chr2R_10_14565001 chr2R_14565001 RAL-392 825 chr2R 14565578 14565591 chr2R 14565636 14565688 7 89 4.5 5.0 4.8 1.2 110 chr2R 14565578 intron ttv + chr2R 14565633 intron ttv + chr2R 14565688 intron ttv + chr2R_7_14565001 chr2R_14565001 RAL-392 826 chr2R 14623886 14623901 chr2R 14623975 14624012 4 103 0.0 6.5 3.2 1.0 126 chr2R 14623886 intron Uhg5 + chr2R 14623949 5` UTR Uhg5 + chr2R 14624012 intron,5` UTR Uhg5 +,snoRNA:Me28S-G2703c + chr2R_4_14620001 chr2R_14620001 RAL-392 827 chr2R 14661145 14661170 chr2R 14661231 14661249 6 85 1.0 1.0 1.0 3.0 104 chr2R 14661145 intergenic not near genes chr2R 14661197 intergenic not near genes chr2R 14661249 intergenic not near genes chr2R_6_14660001 chr2R_14660001 RAL-392 828 chr2R 14728203 14728247 chr2R 14728296 14728350 12 99 6.5 4.5 5.5 1.8 147 chr2R 14728203 intergenic not near genes chr2R 14728276 intergenic not near genes chr2R 14728350 intergenic not near genes chr2R_12_14725001 chr2R_14725001 RAL-392 829 chr2R 14796310 14796552 chr2R 14796414 14796653 7 99 0.0 0.0 0.0 7.0 343 chr2R 14796310 intron kn - chr2R 14796482 intron kn - chr2R 14796653 intron kn - chr2R_7_14795001 chr2R_14795001 RAL-392 830 chr2R 14880851 14880877 chr2R 14881492 14881513 6 636 2.0 4.5 3.2 1.4 662 chr2R 14880851 exon Cyp6a9 - chr2R 14881182 exon Cyp6a9 - chr2R 14881513 intergenic Cyp6a9 - chr2R_6_14880001 chr2R_14880001 RAL-392 831 chr2R 14889213 14889227 chr2R 14897818 14897824 Max-element 4 8613 10.0 0.5 5.2 0.6 8611 chr2R 14889213 intergenic Cyp6a8 - chr2R 14893518 intergenic not near genes chr2R 14897824 intergenic not near genes chr2R_4_14890001 chr2R_14890001 RAL-392 832 chr2R 14911680 14911726 chr2R 14911823 14911869 15 143 5.5 4.5 5.0 2.5 189 chr2R 14911680 intron CG10249 - chr2R 14911774 intron CG10249 - chr2R 14911869 intron CG10249 - chr2R_15_14910001 chr2R_14910001 RAL-392 833 chr2R 14917831 14917870 chr2R 14917936 14917975 14 101 13.0 5.5 9.2 1.4 144 chr2R 14917831 intron CG10249 - chr2R 14917903 intron CG10249 - chr2R 14917975 intron CG10249 - chr2R_14_14915001 chr2R_14915001 RAL-392 834 chr2R 14934444 14934456 chr2R 14934542 14934553 5 103 4.5 0.0 2.2 1.6 109 chr2R 14934444 intron CG10253 - chr2R 14934498 intron CG10253 - chr2R 14934553 intron CG10253 - chr2R_5_14930001 chr2R_14930001 RAL-392 835 chr2R 14955646 14955678 chr2R 14955755 14955787 14 106 8.5 1.0 4.8 2.4 141 chr2R 14955646 intron aPKC - chr2R 14955716 intron aPKC - chr2R 14955787 intron aPKC - chr2R_14_14955001 chr2R_14955001 RAL-392 836 chr2R 14987365 14987412 chr2R 14987529 14987556 21 159 7.5 3.0 5.2 3.4 191 chr2R 14987365 intron pcs + chr2R 14987460 intron pcs + chr2R 14987556 intron pcs + chr2R_21_14985001 chr2R_14985001 RAL-392 837 chr2R 15004710 15004722 chr2R 15005059 15005065 jockey 5 347 15.0 7.5 11.2 0.4 355 chr2R 15004710 intergenic not near genes chr2R 15004888 intergenic not near genes chr2R 15005065 intergenic not near genes chr2R_5_15000001 chr2R_15000001 RAL-392 838 chr2R 15004725 15004761 chr2R 15005053 15005082 jockey 18 344 7.0 6.0 6.5 2.4 357 chr2R 15004725 intergenic not near genes chr2R 15004904 intergenic not near genes chr2R 15005082 intergenic not near genes chr2R_18_15000001 chr2R_15000001 RAL-392 839 chr2R 15015444 15015478 chr2R 15022886 15022902 mdg1 7 7430 0.5 3.5 2.0 2.3 7458 chr2R 15015444 intron hbs + chr2R 15019173 intron hbs + chr2R 15022902 intron hbs + chr2R_7_15015001 chr2R_15015001 RAL-392 840 chr2R 15051070 15051085 chr2R 15051172 15051187 7 99 11.0 8.0 9.5 0.7 117 chr2R 15051070 intergenic not near genes chr2R 15051128 intergenic not near genes chr2R 15051187 intergenic not near genes chr2R_7_15050001 chr2R_15050001 RAL-392 841 chr2R 15051090 15051106 chr2R 15051166 15051186 11 95 5.0 6.5 5.8 1.6 96 chr2R 15051090 intergenic not near genes chr2R 15051138 intergenic not near genes chr2R 15051186 intergenic not near genes chr2R_11_15050001 chr2R_15050001 RAL-392 842 chr2R 15084957 15085003 chr2R 15092026 15092072 297 17 7065 2.5 8.0 5.2 2.7 7115 chr2R 15084957 intergenic not near genes chr2R 15088514 intergenic not near genes chr2R 15092072 5` UTR CR44457 + chr2R_17_15085001 chr2R_15085001 RAL-392 843 chr2R 15117103 15117141 chr2R 15117300 15117331 7 189 9.0 12.5 10.8 0.6 228 chr2R 15117103 intron chn + chr2R 15117217 intron chn + chr2R 15117331 intron chn + chr2R_7_15115001 chr2R_15115001 RAL-392 844 chr2R 15119330 15119346 chr2R 15127800 15127847 Tirant 5 8480 3.5 6.0 4.8 0.9 8517 chr2R 15119330 intron chn + chr2R 15123588 intron chn + chr2R 15127847 intron chn + chr2R_5_15120001 chr2R_15120001 RAL-392 845 chr2R 15133408 15133452 chr2R 15133519 15133589 13 132 6.0 0.0 3.0 3.2 181 chr2R 15133408 intron chn + chr2R 15133498 intron chn + chr2R 15133589 intron chn + chr2R_13_15130001 chr2R_15130001 RAL-392 846 chr2R 15160223 15160236 chr2R 15165580 15165588 5 5352 17.5 25.5 21.5 0.2 5365 chr2R 15160223 intron igl + chr2R 15162906 intron igl + chr2R 15165588 intron igl + chr2R_5_15160001 chr2R_15160001 RAL-392 847 chr2R 15202955 15202979 chr2R 15203058 15203083 7 103 5.5 5.5 5.5 1.1 128 chr2R 15202955 intron,3` UTR CG11807 +,CG42391 + chr2R 15203019 intron CG11807 + chr2R 15203083 exon CG11807 + chr2R_7_15200001 chr2R_15200001 RAL-392 848 chr2R 15235065 15235078 chr2R 15235213 15235226 8 148 1.0 4.5 2.8 2.1 161 chr2R 15235065 intron Fs - chr2R 15235146 intron Fs - chr2R 15235226 intron Fs - chr2R_8_15235001 chr2R_15235001 RAL-392 849 chr2R 15433581 15433597 chr2R 15433684 15433700 4 103 7.0 3.5 5.2 0.6 119 chr2R 15433581 intron CG43729 + chr2R 15433640 intron CG43729 + chr2R 15433700 intron CG43729 + chr2R_4_15430001 chr2R_15430001 RAL-392 850 chr2R 15460027 15460081 chr2R 15460123 15460177 21 86 9.0 13.5 11.2 1.7 150 chr2R 15460027 intron CG43729 + chr2R 15460102 intron CG43729 + chr2R 15460177 intron CG43729 + chr2R_21_15460001 chr2R_15460001 RAL-392 851 chr2R 15656011 15656068 chr2R 15656122 15656179 5 105 0.0 1.5 0.8 2.8 168 chr2R 15656011 intron CG42524 + chr2R 15656095 intron CG42524 + chr2R 15656179 intron CG42524 + chr2R_5_15655001 chr2R_15655001 RAL-392 852 chr2R 15685345 15685396 chr2R 15685467 15685519 25 117 3.0 4.0 3.5 5.6 174 chr2R 15685345 intron,exon Ranbp11 +,CG30082 - chr2R 15685432 intron,intron Ranbp11 +,CG30082 - chr2R 15685519 intron,exon Ranbp11 +,CG30082 - chr2R_25_15685001 chr2R_15685001 RAL-392 853 chr2R 15720747 15720798 chr2R 15720863 15720904 16 112 6.5 1.0 3.8 3.3 157 chr2R 15720747 intergenic not near genes chr2R 15720826 intergenic not near genes chr2R 15720904 intergenic not near genes chr2R_16_15720001 chr2R_15720001 RAL-392 854 chr2R 15785848 15785870 chr2R 15785947 15785969 10 97 10.0 4.5 7.2 1.2 121 chr2R 15785848 intron Zasp52 - chr2R 15785908 intron Zasp52 - chr2R 15785969 intron Zasp52 - chr2R_10_15785001 chr2R_15785001 RAL-392 855 chr2R 15785872 15785894 chr2R 15785945 15785968 11 79 6.5 4.0 5.2 1.8 96 chr2R 15785872 intron Zasp52 - chr2R 15785920 intron Zasp52 - chr2R 15785968 intron Zasp52 - chr2R_11_15785001 chr2R_15785001 RAL-392 856 chr2R 15869257 15869282 chr2R 15869361 15869363 4 92 9.0 0.0 4.5 0.7 106 chr2R 15869257 intergenic Rif1 -,sli - chr2R 15869310 intergenic Rif1 -,sli - chr2R 15869363 intergenic sli -,Rif1 - chr2R_4_15865001 chr2R_15865001 RAL-392 857 chr2R 15891797 15891836 chr2R 15891893 15891932 12 95 4.0 5.5 4.8 2.1 135 chr2R 15891797 intron sli - chr2R 15891864 intron sli - chr2R 15891932 intron sli - chr2R_12_15890001 chr2R_15890001 RAL-392 858 chr2R 16217774 16217787 chr2R 16217859 16217883 4 90 6.5 5.0 5.8 0.6 109 chr2R 16217774 intron mrj - chr2R 16217828 intron mrj - chr2R 16217883 intron mrj - chr2R_4_16215001 chr2R_16215001 RAL-392 859 chr2R 16245418 16245431 chr2R 16245517 16245545 9 112 0.0 6.0 3.0 2.2 127 chr2R 16245418 intron CngA - chr2R 16245482 intron CngA - chr2R 16245545 intron CngA - chr2R_9_16245001 chr2R_16245001 RAL-392 860 chr2R 16352847 16352867 chr2R 16352950 16352955 7 100 5.0 7.5 6.2 1.0 108 chr2R 16352847 intergenic not near genes chr2R 16352901 intergenic not near genes chr2R 16352955 intergenic not near genes chr2R_7_16350001 chr2R_16350001 RAL-392 861 chr2R 16538070 16538091 chr2R 16538184 16538205 8 113 2.0 3.0 2.5 2.3 135 chr2R 16538070 intergenic not near genes chr2R 16538138 intergenic not near genes chr2R 16538205 intergenic not near genes chr2R_8_16535001 chr2R_16535001 RAL-392 862 chr2R 16539620 16539670 chr2R 16544849 16544899 copia 14 5228 6.5 8.0 7.2 1.7 5279 chr2R 16539620 intergenic not near genes chr2R 16542260 intergenic not near genes chr2R 16544899 intergenic not near genes chr2R_14_16540001 chr2R_16540001 RAL-392 863 chr2R 16547021 16547026 chr2R 16547100 16547113 4 88 0.0 0.5 0.2 3.3 92 chr2R 16547021 intergenic not near genes chr2R 16547067 intergenic not near genes chr2R 16547113 intergenic not near genes chr2R_4_16545001 chr2R_16545001 RAL-392 864 chr2R 16571856 16571868 chr2R 16571970 16571983 6 115 6.5 7.0 6.8 0.8 127 chr2R 16571856 intergenic CG4927 + chr2R 16571920 intergenic CG4927 + chr2R 16571983 intergenic CG4927 + chr2R_6_16570001 chr2R_16570001 RAL-392 865 chr2R 16571869 16571900 chr2R 16571969 16572015 20 111 3.5 7.0 5.2 3.2 146 chr2R 16571869 intergenic CG4927 + chr2R 16571942 intergenic CG4927 + chr2R 16572015 intergenic CG4927 + chr2R_20_16570001 chr2R_16570001 RAL-392 866 chr2R 16737161 16737165 chr2R 16737245 16737270 4 92 8.5 8.5 8.5 0.4 109 chr2R 16737161 3` UTR CG43104 - chr2R 16737216 3` UTR CG43104 - chr2R 16737270 exon CG43104 - chr2R_4_16735001 chr2R_16735001 RAL-392 867 chr2R 16787454 16787499 chr2R 16787556 16787601 9 100 7.0 3.5 5.2 1.5 147 chr2R 16787454 intron CG5522 + chr2R 16787528 intron CG5522 + chr2R 16787601 intron CG5522 + chr2R_9_16785001 chr2R_16785001 RAL-392 868 chr2R 16981958 16982095 chr2R 16982079 16982193 7 123 0.0 0.0 0.0 7.0 235 chr2R 16981958 intron Cbp53E + chr2R 16982076 intron Cbp53E + chr2R 16982193 intron Cbp53E + chr2R_7_16980001 chr2R_16980001 RAL-392 869 chr2R 17147235 17147264 chr2R 17152279 17152315 jockey 9 5045 4.5 5.5 5.0 1.5 5080 chr2R 17147235 intergenic not near genes chr2R 17149775 intergenic not near genes chr2R 17152315 intergenic not near genes chr2R_9_17145001 chr2R_17145001 RAL-392 870 chr2R 17236498 17236542 chr2R 17241722 17241731 copia 8 5215 3.5 4.0 3.8 1.7 5233 chr2R 17236498 intron mbl + chr2R 17239114 intron mbl + chr2R 17241731 intron mbl + chr2R_8_17235001 chr2R_17235001 RAL-392 871 chr2R 17397811 17397835 chr2R 17397922 17397948 5 112 6.5 7.5 7.0 0.6 137 chr2R 17397811 intron Sip1 + chr2R 17397880 intron Sip1 + chr2R 17397948 intron Sip1 + chr2R_5_17395001 chr2R_17395001 RAL-392 872 chr2R 17419919 17419964 chr2R 17420020 17420054 5 96 1.5 0.0 0.8 2.8 135 chr2R 17419919 5` UTR cnk - chr2R 17419986 5` UTR cnk - chr2R 17420054 intergenic cnk -,l(2)k01209 + chr2R_5_17415001 chr2R_17415001 RAL-392 873 chr2R 17458985 17459036 chr2R 17459090 17459141 22 104 3.5 8.0 5.8 3.2 156 chr2R 17458985 intron CG14478 + chr2R 17459063 intron CG14478 + chr2R 17459141 intron CG14478 + chr2R_22_17455001 chr2R_17455001 RAL-392 874 chr2R 17470309 17470353 chr2R 17470409 17470428 18 94 3.5 4.0 3.8 3.8 119 chr2R 17470309 intron qkr54B + chr2R 17470368 intron qkr54B + chr2R 17470428 intron qkr54B + chr2R_18_17470001 chr2R_17470001 RAL-392 875 chr2R 17485911 17485932 chr2R 17490693 17490696 F-element 6 4778 6.5 7.5 7.0 0.8 4785 chr2R 17485911 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488304 intron NT5E-2 + chr2R 17490696 intron NT5E-2 + chr2R_6_17485001 chr2R_17485001 RAL-392 876 chr2R 17485935 17485953 chr2R 17490678 17490695 F-element 6 4764 4.5 6.0 5.2 1.0 4760 chr2R 17485935 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488315 intron NT5E-2 + chr2R 17490695 intron NT5E-2 + chr2R_6_17485001 chr2R_17485001 RAL-392 877 chr2R 17528923 17528963 chr2R 17529148 17529182 8 222 3.5 1.5 2.5 2.3 259 chr2R 17528923 intron Patronin - chr2R 17529052 intron Patronin - chr2R 17529182 exon Patronin - chr2R_8_17525001 chr2R_17525001 RAL-392 878 chr2R 17629585 17629631 chr2R 17629684 17629725 29 94 2.5 1.0 1.8 10.4 140 chr2R 17629585 intron,intron CG10936 -,rhi - chr2R 17629655 intron,intron CG10936 -,rhi - chr2R 17629725 intron,intron CG10936 -,rhi - chr2R_29_17625001 chr2R_17625001 RAL-392 879 chr2R 17646318 17646360 chr2R 17646604 17646614 5 276 5.0 4.0 4.5 0.9 296 chr2R 17646318 intergenic not near genes chr2R 17646466 intergenic CCHa1-R - chr2R 17646614 intergenic CCHa1-R - chr2R_5_17645001 chr2R_17645001 RAL-392 880 chr2R 17655588 17655601 chr2R 17655784 17655827 9 219 3.0 5.0 4.0 1.8 239 chr2R 17655588 intron CCHa1-R - chr2R 17655708 intron CCHa1-R - chr2R 17655827 intron CCHa1-R - chr2R_9_17655001 chr2R_17655001 RAL-392 881 chr2R 17709963 17710014 chr2R 17710074 17710124 9 107 4.5 4.5 4.5 1.6 161 chr2R 17709963 intron CG6424 - chr2R 17710044 intron CG6424 - chr2R 17710124 intron CG6424 - chr2R_9_17710001 chr2R_17710001 RAL-392 882 chr2R 17730632 17730672 chr2R 17730730 17730770 12 96 6.5 2.5 4.5 2.2 138 chr2R 17730632 intron,intron CG4975 +,CG4984 + chr2R 17730701 intron,intron CG4975 +,CG4984 + chr2R 17730770 intron,intron CG4975 +,CG4984 + chr2R_12_17730001 chr2R_17730001 RAL-392 883 chr2R 17764401 17764450 chr2R 17764524 17764573 22 121 7.0 10.0 8.5 2.3 172 chr2R 17764401 3` UTR CG5009 + chr2R 17764487 3` UTR CG5009 + chr2R 17764573 3` UTR OstDelta - chr2R_22_17760001 chr2R_17760001 RAL-392 884 chr2R 17782346 17782388 chr2R 17783568 17783611 pogo 14 1223 4.5 2.5 3.5 3.1 1265 chr2R 17782346 intergenic CG33981 -,fab1 - chr2R 17782978 intergenic not near genes chr2R 17783611 intergenic mir-31a - chr2R_14_17780001 chr2R_17780001 RAL-392 885 chr2R 17784019 17784053 chr2R 17784265 17784299 pogo 15 250 5.5 3.5 4.5 2.7 280 chr2R 17784019 intergenic mir-31a - chr2R 17784159 intergenic mir-31a - chr2R 17784299 intergenic mir-31a - chr2R_15_17780001 chr2R_17780001 RAL-392 886 chr2R 17794764 17794787 chr2R 17794863 17794879 9 98 0.0 1.0 0.5 6.0 115 chr2R 17794764 intron Dhit + chr2R 17794822 intron Dhit + chr2R 17794879 intron Dhit + chr2R_9_17790001 chr2R_17790001 RAL-392 887 chr2R 17805701 17805734 chr2R 17805949 17805982 4 248 7.5 2.5 5.0 0.7 281 chr2R 17805701 intron grh + chr2R 17805842 intron grh + chr2R 17805982 intron grh + chr2R_4_17805001 chr2R_17805001 RAL-392 888 chr2R 17918156 17918190 chr2R 17918240 17918279 12 80 7.0 3.0 5.0 2.0 123 chr2R 17918156 intron Elk + chr2R 17918218 intron Elk + chr2R 17918279 intron Elk + chr2R_12_17915001 chr2R_17915001 RAL-392 889 chr2R 17921434 17921469 chr2R 17921536 17921571 7 102 2.5 8.5 5.5 1.1 137 chr2R 17921434 intron Elk + chr2R 17921502 intron Elk + chr2R 17921571 intron Elk + chr2R_7_17920001 chr2R_17920001 RAL-392 890 chr2R 18035401 18035435 chr2R 18035487 18035508 9 81 10.0 5.5 7.8 1.0 107 chr2R 18035401 intergenic not near genes chr2R 18035454 intergenic not near genes chr2R 18035508 intergenic not near genes chr2R_9_18035001 chr2R_18035001 RAL-392 891 chr2R 18045656 18045694 chr2R 18046027 18046066 jockey 12 370 8.0 4.5 6.2 1.7 410 chr2R 18045656 intergenic not near genes chr2R 18045861 intergenic not near genes chr2R 18046066 intergenic CG5767 - chr2R_12_18045001 chr2R_18045001 RAL-392 892 chr2R 18089177 18089226 chr2R 18089309 18089354 4 130 0.0 4.5 2.2 1.2 177 chr2R 18089177 intron CG34386 + chr2R 18089266 intron CG34386 + chr2R 18089354 intron CG34386 + chr2R_4_18085001 chr2R_18085001 RAL-392 893 chr2R 18111662 18111691 chr2R 18115550 18115570 F-element 7 3882 8.5 5.5 7.0 0.9 3908 chr2R 18111662 intergenic not near genes chr2R 18113616 intergenic not near genes chr2R 18115570 intergenic not near genes chr2R_7_18110001 chr2R_18110001 RAL-392 894 chr2R 18172557 18172560 chr2R 18172620 18172650 4 78 6.0 5.0 5.5 0.6 93 chr2R 18172557 5` UTR Dgp-1 - chr2R 18172604 5` UTR Dgp-1 - chr2R 18172650 intergenic Dgp-1 - chr2R_4_18170001 chr2R_18170001 RAL-392 895 chr2R 18174720 18174750 chr2R 18174796 18174851 12 92 6.5 3.5 5.0 2.0 131 chr2R 18174720 3` UTR CG10916 + chr2R 18174786 3` UTR CG10916 + chr2R 18174851 3` UTR CG10916 + chr2R_12_18170001 chr2R_18170001 RAL-392 896 chr2R 18245625 18245628 chr2R 18245709 18245710 4 90 7.0 7.5 7.2 0.5 85 chr2R 18245625 intergenic not near genes chr2R 18245668 intergenic CR44420 - chr2R 18245710 intergenic CR44420 - chr2R_4_18245001 chr2R_18245001 RAL-392 897 chr2R 18307568 18307608 chr2R 18307662 18307716 19 100 5.0 3.0 4.0 3.8 148 chr2R 18307568 intron sbb - chr2R 18307642 intron sbb - chr2R 18307716 intron sbb - chr2R_19_18305001 chr2R_18305001 RAL-392 898 chr2R 18358373 18358416 chr2R 18372605 18372620 roo 15 14227 3.0 4.5 3.8 3.1 14247 chr2R 18358373 intergenic not near genes chr2R 18365496 intergenic not near genes chr2R 18372620 intergenic not near genes chr2R_15_18365001 chr2R_18365001 RAL-392 899 chr2R 18390851 18390902 chr2R 18390958 18390984 7 89 1.0 3.5 2.2 2.2 133 chr2R 18390851 intergenic CG15068 - chr2R 18390918 intergenic CG15068 - chr2R 18390984 intergenic CG15068 - chr2R_7_18390001 chr2R_18390001 RAL-392 900 chr2R 18405729 18405788 chr2R 18405830 18405888 18 94 3.5 0.0 1.8 6.4 159 chr2R 18405729 intergenic GstE6 +,GstE5 + chr2R 18405808 intergenic GstE6 +,GstE5 + chr2R 18405888 intergenic GstE6 + chr2R_18_18405001 chr2R_18405001 RAL-392 901 chr2R 18471896 18471925 chr2R 18471992 18472021 4 96 2.0 0.5 1.2 1.8 125 chr2R 18471896 intron CG30116 - chr2R 18471958 intron CG30116 - chr2R 18472021 intron CG30116 - chr2R_4_18470001 chr2R_18470001 RAL-392 902 chr2R 18480438 18480482 chr2R 18480565 18480609 5 127 0.0 0.0 0.0 5.0 171 chr2R 18480438 intron CG30116 - chr2R 18480524 intron CG30116 - chr2R 18480609 intron CG30116 - chr2R_5_18480001 chr2R_18480001 RAL-392 903 chr2R 18486844 18486859 chr2R 18487110 18487126 10 268 6.0 6.0 6.0 1.4 282 chr2R 18486844 intron CG30116 - chr2R 18486985 intron CG30116 - chr2R 18487126 intron CG30116 - chr2R_10_18485001 chr2R_18485001 RAL-392 904 chr2R 18486867 18486880 chr2R 18487109 18487137 5 258 4.0 6.0 5.0 0.8 270 chr2R 18486867 intron CG30116 - chr2R 18487002 intron CG30116 - chr2R 18487137 intron CG30116 - chr2R_5_18485001 chr2R_18485001 RAL-392 905 chr2R 18528186 18528222 chr2R 18528279 18528282 9 84 3.5 5.5 4.5 1.6 96 chr2R 18528186 intron CG10924 + chr2R 18528234 intron CG10924 + chr2R 18528282 intron CG10924 + chr2R_9_18525001 chr2R_18525001 RAL-392 906 chr2R 18575802 18575830 chr2R 18581987 18582033 3S18 7 6190 1.0 2.5 1.8 2.5 6231 chr2R 18575802 intron GEFmeso - chr2R 18578918 intron GEFmeso - chr2R 18582033 intron GEFmeso - chr2R_7_18575001 chr2R_18575001 RAL-392 907 chr2R 18590873 18590901 chr2R 18600029 18600052 roo 4 9148 0.5 2.0 1.2 1.8 9179 chr2R 18590873 intron GEFmeso - chr2R 18595462 intron GEFmeso - chr2R 18600052 intron GEFmeso - chr2R_4_18595001 chr2R_18595001 RAL-392 908 chr2R 18605128 18605159 chr2R 18605228 18605260 13 108 10.5 6.5 8.5 1.4 132 chr2R 18605128 intron GEFmeso - chr2R 18605194 intron GEFmeso - chr2R 18605260 intron GEFmeso - chr2R_13_18605001 chr2R_18605001 RAL-392 909 chr2R 18646392 18646435 chr2R 18646557 18646599 8 162 8.0 4.5 6.2 1.1 207 chr2R 18646392 intron SP2637 - chr2R 18646496 intron SP2637 - chr2R 18646599 intron SP2637 - chr2R_8_18645001 chr2R_18645001 RAL-392 910 chr2R 18715181 18715233 chr2R 18715280 18715311 10 92 5.5 2.5 4.0 2.0 130 chr2R 18715181 intergenic not near genes chr2R 18715246 intergenic not near genes chr2R 18715311 intergenic not near genes chr2R_10_18715001 chr2R_18715001 RAL-392 911 chr2R 18732358 18732378 chr2R 18732482 18732532 7 147 4.5 5.0 4.8 1.2 174 chr2R 18732358 intron Hs3st-A + chr2R 18732445 intron Hs3st-A + chr2R 18732532 intron Hs3st-A + chr2R_7_18730001 chr2R_18730001 RAL-392 912 chr2R 18778593 18778606 chr2R 18778711 18778723 4 118 4.5 0.5 2.5 1.1 130 chr2R 18778593 intergenic not near genes chr2R 18778658 intergenic not near genes chr2R 18778723 intergenic not near genes chr2R_4_18775001 chr2R_18775001 RAL-392 913 chr2R 18785898 18785944 chr2R 18785997 18786042 10 91 5.5 2.0 3.8 2.1 144 chr2R 18785898 intron CG15080 + chr2R 18785970 intron CG15080 + chr2R 18786042 intron CG15080 + chr2R_10_18785001 chr2R_18785001 RAL-392 914 chr2R 18827695 18827722 chr2R 18827795 18827812 7 97 0.0 8.0 4.0 1.4 117 chr2R 18827695 intron CG15097 - chr2R 18827754 intron CG15097 - chr2R 18827812 intron CG15097 - chr2R_7_18825001 chr2R_18825001 RAL-392 915 chr2R 18862289 18862343 chr2R 18862395 18862475 7 115 0.0 0.0 0.0 7.0 186 chr2R 18862289 intergenic Jheh3 - chr2R 18862382 intergenic Jheh3 -,CG43069 + chr2R 18862475 intergenic CG43069 +,Jheh3 - chr2R_7_18860001 chr2R_18860001 RAL-392 916 chr2R 18924260 18924295 chr2R 18924360 18924395 10 97 6.0 1.5 3.8 2.1 135 chr2R 18924260 intron sano + chr2R 18924328 intron sano + chr2R 18924395 intron sano + chr2R_10_18920001 chr2R_18920001 RAL-392 917 chr2R 18930433 18930484 chr2R 18930546 18930597 23 108 4.0 4.0 4.0 4.6 164 chr2R 18930433 intron sano + chr2R 18930515 intron sano + chr2R 18930597 intron sano + chr2R_23_18930001 chr2R_18930001 RAL-392 918 chr2R 18953149 18953188 chr2R 18953244 18953244 15 96 3.0 3.0 3.0 3.8 95 chr2R 18953149 intron sano + chr2R 18953196 intron sano + chr2R 18953244 intron sano + chr2R_15_18950001 chr2R_18950001 RAL-392 919 chr2R 18992018 18992047 chr2R 18992164 18992208 8 158 4.0 3.5 3.8 1.7 190 chr2R 18992018 intron tn + chr2R 18992113 intron tn + chr2R 18992208 intron tn + chr2R_8_18990001 chr2R_18990001 RAL-392 920 chr2R 19015441 19015464 chr2R 19015528 19015537 6 82 1.5 4.5 3.0 1.5 96 chr2R 19015441 intergenic not near genes chr2R 19015489 intergenic not near genes chr2R 19015537 intergenic not near genes chr2R_6_19015001 chr2R_19015001 RAL-392 921 chr2R 19026027 19026056 chr2R 19026187 19026206 12 157 6.0 0.5 3.2 2.9 179 chr2R 19026027 intron 5-HT1B - chr2R 19026116 intron 5-HT1B - chr2R 19026206 intron 5-HT1B - chr2R_12_19025001 chr2R_19025001 RAL-392 922 chr2R 19175488 19175504 chr2R 19175598 19175606 6 109 7.5 13.5 10.5 0.5 118 chr2R 19175488 intron CG10737 + chr2R 19175547 intron CG10737 + chr2R 19175606 intron CG10737 + chr2R_6_19175001 chr2R_19175001 RAL-392 923 chr2R 19203318 19203332 chr2R 19203714 19203747 5 403 11.0 19.5 15.2 0.3 429 chr2R 19203318 intron hppy + chr2R 19203532 intron hppy + chr2R 19203747 intron hppy + chr2R_5_19200001 chr2R_19200001 RAL-392 924 chr2R 19385260 19385312 chr2R 19385563 19385615 12 300 2.0 2.5 2.2 3.8 355 chr2R 19385260 intergenic CG10073 + chr2R 19385438 intergenic CG10073 +,CG10081 + chr2R 19385615 intergenic CG10081 + chr2R_12_19385001 chr2R_19385001 RAL-392 925 chr2R 19498463 19498498 chr2R 19498558 19498567 5 91 0.0 4.5 2.2 1.6 104 chr2R 19498463 intron CG15120 + chr2R 19498515 intron CG15120 + chr2R 19498567 intron CG15120 + chr2R_5_19495001 chr2R_19495001 RAL-392 926 chr2R 19569143 19569158 chr2R 19569238 19569254 4 96 12.0 8.5 10.2 0.4 111 chr2R 19569143 intron sm - chr2R 19569198 intron sm - chr2R 19569254 intron sm - chr2R_4_19565001 chr2R_19565001 RAL-392 927 chr2R 19569166 19569183 chr2R 19569231 19569264 5 76 4.5 6.5 5.5 0.8 98 chr2R 19569166 intron sm - chr2R 19569215 intron sm - chr2R 19569264 intron sm - chr2R_5_19565001 chr2R_19565001 RAL-392 928 chr2R 19588734 19588782 chr2R 19588827 19588880 11 94 6.5 4.0 5.2 1.8 146 chr2R 19588734 intron sm - chr2R 19588807 intron sm - chr2R 19588880 intron sm - chr2R_11_19585001 chr2R_19585001 RAL-392 929 chr2R 19601249 19601300 chr2R 19601359 19601410 24 105 4.0 3.0 3.5 5.3 161 chr2R 19601249 intron sm - chr2R 19601330 intron sm - chr2R 19601410 intron sm - chr2R_24_19600001 chr2R_19600001 RAL-392 930 chr2R 19773989 19774043 chr2R 19774122 19774170 17 124 3.5 5.5 4.5 3.1 181 chr2R 19773989 intergenic not near genes chr2R 19774080 intergenic not near genes chr2R 19774170 intergenic not near genes chr2R_17_19770001 chr2R_19770001 RAL-392 931 chr2R 19776602 19776627 chr2R 19779924 19779951 jockey 9 3328 4.0 8.5 6.2 1.2 3349 chr2R 19776602 intergenic not near genes chr2R 19778276 intergenic not near genes chr2R 19779951 intergenic not near genes chr2R_9_19775001 chr2R_19775001 RAL-392 932 chr2R 19807650 19807699 chr2R 19807752 19807801 17 100 2.0 4.0 3.0 4.2 151 chr2R 19807650 intergenic not near genes chr2R 19807726 intergenic not near genes chr2R 19807801 intergenic not near genes chr2R_17_19805001 chr2R_19805001 RAL-392 933 chr2R 19869778 19869812 chr2R 19869867 19869912 5 89 3.5 1.5 2.5 1.4 134 chr2R 19869778 intergenic CR44460 + chr2R 19869845 intergenic CR44460 + chr2R 19869912 intergenic CR44460 + chr2R_5_19865001 chr2R_19865001 RAL-392 934 chr2R 19914828 19914853 chr2R 19922260 19922273 mdg1 9 7426 9.5 1.5 5.5 1.4 7445 chr2R 19914828 intergenic not near genes chr2R 19918550 intergenic not near genes chr2R 19922273 intergenic not near genes chr2R_9_19915001 chr2R_19915001 RAL-392 935 chr2R 20069224 20069250 chr2R 20071873 20071895 opus 9 2647 1.0 1.5 1.2 4.1 2671 chr2R 20069224 intergenic not near genes chr2R 20070560 intergenic not near genes chr2R 20071895 intergenic not near genes chr2R_9_20070001 chr2R_20070001 RAL-392 936 chr2R 20080435 20080474 chr2R 20080529 20080574 5 85 4.0 1.0 2.5 1.4 139 chr2R 20080435 intergenic not near genes chr2R 20080504 intergenic not near genes chr2R 20080574 intergenic not near genes chr2R_5_20080001 chr2R_20080001 RAL-392 937 chr2R 20125724 20125749 chr2R 20125820 20125828 7 93 4.5 12.0 8.2 0.8 104 chr2R 20125724 intergenic not near genes chr2R 20125776 intergenic not near genes chr2R 20125828 intergenic not near genes chr2R_7_20125001 chr2R_20125001 RAL-392 938 chr2R 20220798 20220835 chr2R 20221320 20221357 11 526 3.0 5.0 4.0 2.2 559 chr2R 20220798 intergenic not near genes chr2R 20221078 intergenic CR45423 - chr2R 20221357 intergenic CR45423 - chr2R_11_20220001 chr2R_20220001 RAL-392 939 chr2R 20223954 20223986 chr2R 20224039 20224074 8 96 7.0 2.0 4.5 1.5 120 chr2R 20223954 intergenic not near genes chr2R 20224014 intergenic not near genes chr2R 20224074 intergenic not near genes chr2R_8_20220001 chr2R_20220001 RAL-392 940 chr2R 20511890 20511893 chr2R 20512593 20512603 5 709 0.5 9.0 4.8 0.9 713 chr2R 20511890 intergenic CR44649 +,CR44648 + chr2R 20512246 intergenic CR44649 +,CG13426 - chr2R 20512603 intergenic CG13426 - chr2R_5_20510001 chr2R_20510001 RAL-392 941 chr2R 20523053 20523071 chr2R 20523161 20523171 6 117 2.0 10.5 6.2 0.8 118 chr2R 20523053 intergenic not near genes chr2R 20523112 intergenic not near genes chr2R 20523171 intergenic not near genes chr2R_6_20520001 chr2R_20520001 RAL-392 942 chr2R 20555322 20555337 chr2R 20555434 20555449 5 111 6.0 0.5 3.2 1.2 127 chr2R 20555322 intergenic not near genes chr2R 20555386 intergenic not near genes chr2R 20555449 intergenic not near genes chr2R_5_20555001 chr2R_20555001 RAL-392 943 chr2R 20572568 20572584 chr2R 20572673 20572694 5 109 2.0 4.0 3.0 1.2 126 chr2R 20572568 intron qsm - chr2R 20572631 intron qsm - chr2R 20572694 intron qsm - chr2R_5_20570001 chr2R_20570001 RAL-392 944 chr2R 20578635 20578686 chr2R 20578744 20578795 18 103 6.0 4.0 5.0 3.0 160 chr2R 20578635 intron qsm - chr2R 20578715 intron qsm - chr2R 20578795 intron qsm - chr2R_18_20575001 chr2R_20575001 RAL-392 945 chr2R 20601721 20601738 chr2R 20601816 20601843 8 104 4.5 4.5 4.5 1.5 122 chr2R 20601721 intron bl + chr2R 20601782 intron bl + chr2R 20601843 intron bl + chr2R_8_20600001 chr2R_20600001 RAL-392 946 chr2R 20601740 20601755 chr2R 20601813 20601840 9 93 2.0 4.0 3.0 2.2 100 chr2R 20601740 intron bl + chr2R 20601790 intron bl + chr2R 20601840 intron bl + chr2R_9_20600001 chr2R_20600001 RAL-392 947 chr2R 20707947 20707968 chr2R 20708048 20708055 16 99 4.5 4.5 4.5 2.9 108 chr2R 20707947 intron dpr + chr2R 20708001 intron dpr + chr2R 20708055 intron dpr + chr2R_16_20705001 chr2R_20705001 RAL-392 948 chr2R 20739450 20739475 chr2R 20744216 20744263 F-element 4 4776 1.0 4.5 2.8 1.1 4813 chr2R 20739450 intron dpr + chr2R 20741856 intron dpr + chr2R 20744263 intron dpr + chr2R_4_20740001 chr2R_20740001 RAL-392 949 chr2R 20783296 20783329 chr2R 20788088 20788104 F-element 11 4786 2.5 8.0 5.2 1.8 4808 chr2R 20783296 intergenic not near genes chr2R 20785700 intergenic not near genes chr2R 20788104 intergenic CG43666 - chr2R_11_20785001 chr2R_20785001 RAL-392 950 chr2R 20826938 20826986 chr2R 20827058 20827085 5 116 3.5 7.5 5.5 0.8 147 chr2R 20826938 intron insc - chr2R 20827012 intron insc - chr2R 20827085 intron insc - chr2R_5_20825001 chr2R_20825001 RAL-392 951 chr2R 20942353 20942374 chr2R 20942456 20942477 10 103 0.5 2.5 1.5 4.0 124 chr2R 20942353 intergenic not near genes chr2R 20942415 intergenic not near genes chr2R 20942477 intergenic not near genes chr2R_10_20940001 chr2R_20940001 RAL-392 952 chr2R 20962885 20962939 chr2R 20963003 20963037 12 109 3.0 4.0 3.5 2.7 152 chr2R 20962885 intergenic not near genes chr2R 20962961 intergenic not near genes chr2R 20963037 intergenic not near genes chr2R_12_20960001 chr2R_20960001 RAL-392 953 chr2R 20967006 20967054 chr2R 20967103 20967151 12 94 4.0 0.0 2.0 4.0 145 chr2R 20967006 intergenic not near genes chr2R 20967078 intergenic not near genes chr2R 20967151 intergenic not near genes chr2R_12_20965001 chr2R_20965001 RAL-392 954 chr2R 21077727 21077739 chr2R 21082944 21082956 6 5216 23.5 44.5 34.0 0.2 5229 chr2R 21077727 intron Treh + chr2R 21080342 intron Treh + chr2R 21082956 intron Treh + chr2R_6_21080001 chr2R_21080001 RAL-392 955 chr2R 21103524 21103552 chr2R 21103624 21103652 12 96 7.0 0.5 3.8 2.5 128 chr2R 21103524 intron ktub + chr2R 21103588 intron ktub + chr2R 21103652 intron ktub + chr2R_12_21100001 chr2R_21100001 RAL-392 956 chr2R 21113469 21113485 chr2R 21113578 21113594 7 109 7.5 8.0 7.8 0.8 125 chr2R 21113469 intron ktub + chr2R 21113532 intron ktub + chr2R 21113594 intron ktub + chr2R_7_21110001 chr2R_21110001 RAL-392 957 chr2R 21136890 21136916 chr2R 21136980 21136995 12 96 4.5 4.0 4.2 2.3 105 chr2R 21136890 intron Magi - chr2R 21136942 intron Magi - chr2R 21136995 intron Magi - chr2R_12_21135001 chr2R_21135001 RAL-392 958 chr2R 21151100 21151146 chr2R 21153753 21153799 opus 14 2651 7.5 6.5 7.0 1.8 2699 chr2R 21151100 intron CG30389 - chr2R 21152450 intron CG30389 - chr2R 21153799 intron CG30389 - chr2R_14_21150001 chr2R_21150001 RAL-392 959 chr2R 21188216 21188250 chr2R 21188302 21188351 11 94 5.0 5.5 5.2 1.8 135 chr2R 21188216 exon tud + chr2R 21188284 intron tud + chr2R 21188351 intron tud + chr2R_11_21185001 chr2R_21185001 RAL-392 960 chr2R 21232628 21232646 chr2R 21232818 21232821 4 186 9.0 0.5 4.8 0.7 193 chr2R 21232628 intron ASPP - chr2R 21232724 intron ASPP - chr2R 21232821 intron ASPP - chr2R_4_21230001 chr2R_21230001 RAL-392 961 chr2R 21285416 21285431 chr2R 21285513 21285513 5 94 11.0 10.5 10.8 0.4 97 chr2R 21285416 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285464 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285513 3` UTR,3` UTR MFS16 +,CG10505 - chr2R_5_21285001 chr2R_21285001 RAL-392 962 chr2R 21363120 21363185 chr2R 21363238 21363284 4 107 0.0 0.0 0.0 4.0 164 chr2R 21363120 intron cv-2 - chr2R 21363202 intron cv-2 - chr2R 21363284 intron cv-2 - chr2R_4_21360001 chr2R_21360001 RAL-392 963 chr2R 21370500 21370511 chr2R 21370627 21370638 7 126 7.5 4.5 6.0 1.0 138 chr2R 21370500 intron cv-2 - chr2R 21370569 intron cv-2 - chr2R 21370638 intron cv-2 - chr2R_7_21370001 chr2R_21370001 RAL-392 964 chr2R 21370513 21370531 chr2R 21370624 21370656 6 124 5.5 4.0 4.8 1.0 143 chr2R 21370513 intron cv-2 - chr2R 21370584 intron cv-2 - chr2R 21370656 intron cv-2 - chr2R_6_21370001 chr2R_21370001 RAL-392 965 chr2R 21408350 21408407 chr2R 21408461 21408509 15 103 3.0 0.5 1.8 5.4 159 chr2R 21408350 intron Sdc - chr2R 21408430 intron Sdc - chr2R 21408509 intron Sdc - chr2R_15_21405001 chr2R_21405001 RAL-392 966 chr2R 21416795 21416818 chr2R 21416878 21416887 5 71 1.5 6.0 3.8 1.0 92 chr2R 21416795 intron Sdc - chr2R 21416841 intron Sdc - chr2R 21416887 intron Sdc - chr2R_5_21415001 chr2R_21415001 RAL-392 967 chr2R 21541460 21541508 chr2R 21541561 21541602 20 94 6.0 4.0 5.0 3.3 142 chr2R 21541460 intron Egfr + chr2R 21541531 intron Egfr + chr2R 21541602 intron Egfr + chr2R_20_21540001 chr2R_21540001 RAL-392 968 chr2R 21546018 21546066 chr2R 21546117 21546145 24 90 7.0 11.0 9.0 2.4 127 chr2R 21546018 intron Egfr + chr2R 21546082 intron Egfr + chr2R 21546145 intron Egfr + chr2R_24_21545001 chr2R_21545001 RAL-392 969 chr2R 21585216 21585247 chr2R 21585313 21585340 9 97 2.5 4.5 3.5 2.0 124 chr2R 21585216 3` UTR CG30222 + chr2R 21585278 3` UTR CG30222 + chr2R 21585340 3` UTR CG30222 + chr2R_9_21585001 chr2R_21585001 RAL-392 970 chr2R 21605902 21605927 chr2R 21606006 21606031 4 102 9.5 4.0 6.8 0.5 129 chr2R 21605902 3` UTR CG10433 - chr2R 21605966 3` UTR CG10433 - chr2R 21606031 3` UTR CG10433 - chr2R_4_21605001 chr2R_21605001 RAL-392 971 chr2R 21753084 21753116 chr2R 21753570 21753615 roo 11 496 3.5 9.5 6.5 1.5 531 chr2R 21753084 intergenic not near genes chr2R 21753350 intergenic not near genes chr2R 21753615 intergenic not near genes chr2R_11_21750001 chr2R_21750001 RAL-392 972 chr2R 21783542 21783569 chr2R 21783667 21783681 7 122 3.0 1.5 2.2 2.2 139 chr2R 21783542 intergenic not near genes chr2R 21783612 intergenic not near genes chr2R 21783681 intergenic not near genes chr2R_7_21780001 chr2R_21780001 RAL-392 973 chr2R 21809508 21809558 chr2R 21817763 21817808 roo 12 8254 6.0 6.0 6.0 1.7 8300 chr2R 21809508 intergenic not near genes chr2R 21813658 intergenic not near genes chr2R 21817808 intergenic not near genes chr2R_12_21810001 chr2R_21810001 RAL-392 974 chr2R 21870959 21870971 chr2R 21871052 21871060 6 94 0.0 2.0 1.0 3.0 101 chr2R 21870959 intergenic not near genes chr2R 21871010 intergenic not near genes chr2R 21871060 intergenic not near genes chr2R_6_21870001 chr2R_21870001 RAL-392 975 chr2R 21880594 21880638 chr2R 21880713 21880757 17 112 3.0 8.0 5.5 2.6 163 chr2R 21880594 intron Fili + chr2R 21880676 intron Fili + chr2R 21880757 intron Fili + chr2R_17_21880001 chr2R_21880001 RAL-392 976 chr2R 21932258 21932281 chr2R 21932326 21932345 7 84 1.5 2.5 2.0 2.3 87 chr2R 21932258 intron Fili + chr2R 21932302 intron Fili + chr2R 21932345 intron Fili + chr2R_7_21930001 chr2R_21930001 RAL-392 977 chr2R 21956295 21956328 chr2R 21956374 21956427 11 88 3.0 1.5 2.2 3.4 132 chr2R 21956295 intergenic not near genes chr2R 21956361 intergenic not near genes chr2R 21956427 intergenic not near genes chr2R_11_21955001 chr2R_21955001 RAL-392 978 chr2R 21997669 21997700 chr2R 21997753 21997764 6 84 2.5 4.5 3.5 1.3 95 chr2R 21997669 intron CG34370 - chr2R 21997716 intron CG34370 - chr2R 21997764 intron CG34370 - chr2R_6_21995001 chr2R_21995001 RAL-392 979 chr2R 22009025 22009079 chr2R 22009134 22009175 7 100 0.0 9.5 4.8 1.2 150 chr2R 22009025 intron CG34370 - chr2R 22009100 intron CG34370 - chr2R 22009175 intron CG34370 - chr2R_7_22005001 chr2R_22005001 RAL-392 980 chr2R 22012975 22013009 chr2R 22013090 22013122 10 114 4.0 5.5 4.8 1.7 147 chr2R 22012975 intron CG34370 - chr2R 22013048 intron CG34370 - chr2R 22013122 intron CG34370 - chr2R_10_22010001 chr2R_22010001 RAL-392 981 chr2R 22025640 22025676 chr2R 22025741 22025793 9 105 2.0 7.0 4.5 1.6 153 chr2R 22025640 intron CG34370 - chr2R 22025716 intron CG34370 - chr2R 22025793 intron CG34370 - chr2R_9_22025001 chr2R_22025001 RAL-392 982 chr2R 22029504 22029534 chr2R 22029602 22029632 10 98 6.5 2.0 4.2 1.9 128 chr2R 22029504 intron CG34370 - chr2R 22029568 intron CG34370 - chr2R 22029632 intron CG34370 - chr2R_10_22025001 chr2R_22025001 RAL-392 983 chr2R 22185668 22185676 chr2R 22185782 22185789 4 116 2.5 1.5 2.0 1.3 121 chr2R 22185668 3` UTR MED16 + chr2R 22185728 3` UTR MED16 + chr2R 22185789 3` UTR MED16 + chr2R_4_22185001 chr2R_22185001 RAL-392 984 chr2R 22185677 22185701 chr2R 22185781 22185811 5 110 1.0 1.5 1.2 2.3 134 chr2R 22185677 3` UTR MED16 + chr2R 22185744 3` UTR MED16 + chr2R 22185811 3` UTR MED16 + chr2R_5_22185001 chr2R_22185001 RAL-392 985 chr2R 22276878 22276886 chr2R 22277001 22277015 5 127 0.0 12.5 6.2 0.7 137 chr2R 22276878 intron dve + chr2R 22276946 intron dve + chr2R 22277015 intron dve + chr2R_5_22275001 chr2R_22275001 RAL-392 986 chr2R 22292096 22292104 chr2R 22292157 22292171 4 84 1.5 2.5 2.0 1.3 75 chr2R 22292096 5` UTR CR43422 + chr2R 22292134 5` UTR CR43422 + chr2R 22292171 5` UTR CR43422 + chr2R_4_22290001 chr2R_22290001 RAL-392 987 chr2R 22349714 22349717 chr2R 22351472 22351486 jockey 4 1780 4.0 2.0 3.0 1.0 1772 chr2R 22349714 intron Liprin-gamma - chr2R 22350600 intron Liprin-gamma - chr2R 22351486 intron Liprin-gamma - chr2R_4_22350001 chr2R_22350001 RAL-392 988 chr2R 22465300 22465350 chr2R 22465513 22465527 BS 15 208 0.0 3.0 1.5 6.0 227 chr2R 22465300 intron CG10384 + chr2R 22465414 intron CG10384 + chr2R 22465527 intron CG10384 + chr2R_15_22465001 chr2R_22465001 RAL-392 989 chr2R 22577082 22577123 chr2R 22577174 22577202 5 92 1.5 1.0 1.2 2.3 120 chr2R 22577082 intron dnr1 - chr2R 22577142 intron dnr1 - chr2R 22577202 intron dnr1 - chr2R_5_22575001 chr2R_22575001 RAL-392 990 chr2R 22623440 22623480 chr2R 22623600 22623624 16 151 7.0 4.5 5.8 2.4 184 chr2R 22623440 intron CG33143 + chr2R 22623532 intron CG33143 + chr2R 22623624 intron CG33143 + chr2R_16_22620001 chr2R_22620001 RAL-392 991 chr2R 22756608 22756650 chr2R 22756712 22756748 5 99 2.0 0.5 1.2 2.3 140 chr2R 22756608 intron,intron CG42260 -,CR30267 + chr2R 22756678 intron,intron CG42260 -,CR30267 + chr2R 22756748 intron,intron CG42260 -,CR30267 + chr2R_5_22755001 chr2R_22755001 RAL-392 992 chr2R 22774968 22774992 chr2R 22775387 22775406 jockey 6 427 5.0 5.0 5.0 1.0 438 chr2R 22774968 intron CG42260 - chr2R 22775187 intron CG42260 - chr2R 22775406 intron CG42260 - chr2R_6_22775001 chr2R_22775001 RAL-392 993 chr2R 22834670 22834935 chr2R 22837419 22837685 9 2760 8.0 13.5 10.8 0.8 3015 chr2R 22834670 5` UTR CG12490 + chr2R 22836178 exon CG12490 + chr2R 22837685 intron CG9825 + chr2R_9_22835001 chr2R_22835001 RAL-392 994 chr2R 22834256 22834273 chr2R 22836315 22836327 5 2044 32.0 15.5 23.8 0.2 2071 chr2R 22834256 exon CG30265 + chr2R 22835292 exon CG12490 + chr2R 22836327 intron CG12490 + chr2R_5_22835001 chr2R_22835001 RAL-392 995 chr2R 22839475 22839502 chr2R 22839574 22839581 10 93 7.5 0.5 4.0 2.0 106 chr2R 22839475 intergenic CG9825 + chr2R 22839528 intergenic CG9825 + chr2R 22839581 intergenic CG9825 + chr2R_10_22835001 chr2R_22835001 RAL-392 996 chr2R 22839505 22839518 chr2R 22839573 22839577 5 67 6.0 0.5 3.2 1.2 72 chr2R 22839505 intergenic CG9825 + chr2R 22839541 intergenic CG9825 + chr2R 22839577 intergenic CG9825 + chr2R_5_22835001 chr2R_22835001 RAL-392 997 chr2R 22899087 22899134 chr2R 22899817 22899824 6 699 18.0 13.5 15.8 0.4 737 chr2R 22899087 intron nahoda + chr2R 22899456 intron nahoda + chr2R 22899824 intron nahoda + chr2R_6_22895001 chr2R_22895001 RAL-392 998 chr2R 22951832 22951863 chr2R 22951923 22951964 14 96 4.0 6.0 5.0 2.3 132 chr2R 22951832 3` UTR CR32835 - chr2R 22951898 3` UTR CR32835 - chr2R 22951964 intron CR32835 - chr2R_14_22950001 chr2R_22950001 RAL-392 999 chr2R 22969300 22969344 chr2R 22971530 22971574 6 2233 20.5 11.0 15.8 0.4 2274 chr2R 22969300 intergenic not near genes chr2R 22970437 intergenic not near genes chr2R 22971574 intergenic not near genes chr2R_6_22970001 chr2R_22970001 RAL-392 1000 chr2R 23038448 23038477 chr2R 23038553 23038582 14 100 2.0 4.5 3.2 3.3 134 chr2R 23038448 intron,intron twi +,CG42741 - chr2R 23038515 intron,intron twi +,CG42741 - chr2R 23038582 intron,intron twi +,CG42741 - chr2R_14_23035001 chr2R_23035001 RAL-392 1001 chr2R 23061770 23061781 chr2R 23061869 23061869 4 97 5.0 7.0 6.0 0.6 99 chr2R 23061770 3` UTR l(2)06496 - chr2R 23061820 3` UTR l(2)06496 - chr2R 23061869 3` UTR l(2)06496 - chr2R_4_23060001 chr2R_23060001 RAL-392 1002 chr2R 23189993 23190017 chr2R 23190097 23190121 12 104 5.0 0.0 2.5 3.4 128 chr2R 23189993 intron CG34371 - chr2R 23190057 intron CG34371 - chr2R 23190121 intron CG34371 - chr2R_12_23190001 chr2R_23190001 RAL-392 1003 chr2R 23236796 23236831 chr2R 23236914 23236928 4 110 0.5 0.0 0.2 3.3 132 chr2R 23236796 intergenic not near genes chr2R 23236862 intergenic not near genes chr2R 23236928 intergenic not near genes chr2R_4_23235001 chr2R_23235001 RAL-392 1004 chr2R 23287831 23287853 chr2R 23287904 23287930 4 75 1.5 3.5 2.5 1.1 99 chr2R 23287831 intergenic not near genes chr2R 23287880 intergenic not near genes chr2R 23287930 intergenic not near genes chr2R_4_23285001 chr2R_23285001 RAL-392 1005 chr2R 23356279 23356307 chr2R 23356368 23356416 14 100 7.5 8.0 7.8 1.6 137 chr2R 23356279 3` UTR Rpi + chr2R 23356348 3` UTR Rpi + chr2R 23356416 3` UTR,3` UTR Rpi +,CG3500 - chr2R_14_23355001 chr2R_23355001 RAL-392 1006 chr2R 23411032 23411063 chr2R 23411134 23411153 6 96 5.0 2.5 3.8 1.2 121 chr2R 23411032 intergenic not near genes chr2R 23411092 intergenic not near genes chr2R 23411153 intergenic not near genes chr2R_6_23410001 chr2R_23410001 RAL-392 1007 chr2R 23423719 23423773 chr2R 23423896 23423951 21 174 2.5 4.5 3.5 4.7 232 chr2R 23423719 intron CG9815 - chr2R 23423835 intron CG9815 - chr2R 23423951 intron CG9815 - chr2R_21_23420001 chr2R_23420001 RAL-392 1008 chr2R 23429221 23429241 chr2R 23429435 23429444 5 212 1.0 0.5 0.8 2.8 223 chr2R 23429221 intron CG9815 - chr2R 23429332 intron CG9815 - chr2R 23429444 intron CG9815 - chr2R_5_23425001 chr2R_23425001 RAL-392 1009 chr2R 23437209 23437241 chr2R 23437306 23437326 8 90 0.0 2.5 1.2 3.6 117 chr2R 23437209 intergenic not near genes chr2R 23437268 intergenic not near genes chr2R 23437326 intergenic not near genes chr2R_8_23435001 chr2R_23435001 RAL-392 1010 chr2R 23589180 23589183 chr2R 23589262 23589278 4 90 10.0 16.5 13.2 0.3 98 chr2R 23589180 intron apt + chr2R 23589229 intron apt + chr2R 23589278 intron apt + chr2R_4_23585001 chr2R_23585001 RAL-392 1011 chr2R 23589185 23589193 chr2R 23589258 23589274 6 81 9.0 14.5 11.8 0.5 89 chr2R 23589185 intron apt + chr2R 23589230 intron apt + chr2R 23589274 intron apt + chr2R_6_23585001 chr2R_23585001 RAL-392 1012 chr2R 23722969 23723004 chr2R 23723052 23723100 27 90 2.0 3.5 2.8 7.1 131 chr2R 23722969 intron Sesn + chr2R 23723034 intron Sesn + chr2R 23723100 intron Sesn + chr2R_27_23720001 chr2R_23720001 RAL-392 1013 chr2R 23726213 23726235 chr2R 23726317 23726345 4 105 9.0 3.5 6.2 0.6 132 chr2R 23726213 intron Sesn + chr2R 23726279 intron Sesn + chr2R 23726345 intron Sesn + chr2R_4_23725001 chr2R_23725001 RAL-392 1014 chr2R 23726240 23726252 chr2R 23726314 23726362 5 99 7.5 3.5 5.5 0.8 122 chr2R 23726240 intron Sesn + chr2R 23726301 intron Sesn + chr2R 23726362 intron Sesn + chr2R_5_23725001 chr2R_23725001 RAL-392 1015 chr2R 23784462 23784483 chr2R 23784559 23784570 4 90 5.5 3.0 4.2 0.8 108 chr2R 23784462 intron CG9850 - chr2R 23784516 intron CG9850 - chr2R 23784570 intron CG9850 - chr2R_4_23780001 chr2R_23780001 RAL-392 1016 chr2R 23784484 23784506 chr2R 23784549 23784604 10 87 2.0 1.5 1.8 3.6 120 chr2R 23784484 intron CG9850 - chr2R 23784544 intron CG9850 - chr2R 23784604 intron CG9850 - chr2R_10_23780001 chr2R_23780001 RAL-392 1017 chr2R 23865807 23865856 chr2R 23865909 23865946 14 100 5.0 3.0 4.0 2.8 139 chr2R 23865807 intron CG5569 + chr2R 23865876 intron CG5569 + chr2R 23865946 intron CG5569 + chr2R_14_23865001 chr2R_23865001 RAL-392 1018 chr2R 23914284 23914332 chr2R 23921923 23921941 412 19 7627 2.5 5.0 3.8 4.0 7657 chr2R 23914284 exon kcc + chr2R 23918112 intron kcc + chr2R 23921941 intron kcc + chr2R_19_23915001 chr2R_23915001 RAL-392 1019 chr2R 24031362 24031413 chr2R 24031466 24031480 25 97 6.0 6.5 6.2 3.5 118 chr2R 24031362 5` UTR CG30172 - chr2R 24031421 5` UTR CG30172 - chr2R 24031480 intergenic CG30172 -,Chi - chr2R_25_24030001 chr2R_24030001 RAL-392 1020 chr2R 24177214 24177267 chr2R 24184719 24184751 412 25 7501 10.5 6.0 8.2 2.7 7537 chr2R 24177214 3` UTR Nop60B + chr2R 24180982 intron Nop60B + chr2R 24184751 3` UTR Nop60B + chr2R_25_24180001 chr2R_24180001 RAL-392 1021 chr2R 24278305 24278355 chr2R 24278404 24278437 7 83 0.5 4.0 2.2 2.2 132 chr2R 24278305 intron nvy + chr2R 24278371 intron nvy + chr2R 24278437 intron nvy + chr2R_7_24275001 chr2R_24275001 RAL-392 1022 chr2R 24351393 24351437 chr2R 24351494 24351538 16 98 4.5 2.5 3.5 3.6 145 chr2R 24351393 intron bs + chr2R 24351466 intron bs + chr2R 24351538 intron,3` UTR bs +,CR44811 - chr2R_16_24350001 chr2R_24350001 RAL-392 1023 chr2R 24353425 24353436 chr2R 24361792 24361818 roo 6 8379 7.0 3.5 5.2 1.0 8393 chr2R 24353425 intron,intron bs +,CR44811 - chr2R 24357622 intron,intron bs +,CR44811 - chr2R 24361818 intron,intron bs +,CR44811 - chr2R_6_24355001 chr2R_24355001 RAL-392 1024 chr2R 24353442 24353449 chr2R 24361789 24361815 roo 6 8361 5.0 2.5 3.8 1.2 8373 chr2R 24353442 intron,intron bs +,CR44811 - chr2R 24357628 intron,intron bs +,CR44811 - chr2R 24361815 intron,intron bs +,CR44811 - chr2R_6_24355001 chr2R_24355001 RAL-392 1025 chr2R 24383805 24383856 chr2R 24383906 24383947 9 99 4.5 2.5 3.5 2.0 142 chr2R 24383805 intron mAChR-A - chr2R 24383876 intron mAChR-A - chr2R 24383947 exon mAChR-A - chr2R_9_24380001 chr2R_24380001 RAL-392 1026 chr2R 24467082 24467111 chr2R 24467205 24467209 4 110 5.5 1.5 3.5 0.9 127 chr2R 24467082 intron CG13579 + chr2R 24467146 intron CG13579 + chr2R 24467209 intron CG13579 + chr2R_4_24465001 chr2R_24465001 RAL-392 1027 chr2R 24520616 24520642 chr2R 24520692 24520743 7 94 6.5 3.5 5.0 1.2 127 chr2R 24520616 exon Ir60d + chr2R 24520680 exon Ir60d + chr2R 24520743 exon Ir60d + chr2R_7_24520001 chr2R_24520001 RAL-392 1028 chr2R 24592953 24592975 chr2R 24593058 24593088 5 107 5.5 3.0 4.2 1.0 135 chr2R 24592953 intron pio + chr2R 24593020 intron pio + chr2R 24593088 intron pio + chr2R_5_24590001 chr2R_24590001 RAL-392 1029 chr2R 24633993 24634025 chr2R 24634078 24634119 10 78 3.5 2.5 3.0 2.5 126 chr2R 24633993 intron CG13594 - chr2R 24634056 intron CG13594 - chr2R 24634119 intron CG13594 - chr2R_10_24630001 chr2R_24630001 RAL-392 1030 chr2R 24687626 24687668 chr2R 24687731 24687773 5 99 2.5 5.5 4.0 1.0 147 chr2R 24687626 intergenic Mmp1 - chr2R 24687700 intergenic Mmp1 - chr2R 24687773 intergenic Mmp1 - chr2R_5_24685001 chr2R_24685001 RAL-392 1031 chr2R 24718452 24718478 chr2R 24718549 24718564 4 96 2.0 2.0 2.0 1.3 112 chr2R 24718452 intron Mid1 - chr2R 24718508 intron Mid1 - chr2R 24718564 intron Mid1 - chr2R_4_24715001 chr2R_24715001 RAL-392 1032 chr2R 24727875 24727907 chr2R 24735403 24735414 mdg1 6 7518 4.0 6.0 5.0 1.0 7539 chr2R 24727875 intron Mid1 - chr2R 24731644 intron Mid1 - chr2R 24735414 intron Mid1 - chr2R_6_24730001 chr2R_24730001 RAL-392 1033 chr2R 24747250 24747280 chr2R 24747335 24747367 9 83 3.5 7.5 5.5 1.4 117 chr2R 24747250 intron CG30421 + chr2R 24747308 intron CG30421 + chr2R 24747367 intron CG30421 + chr2R_9_24745001 chr2R_24745001 RAL-392 1034 chr2R 24768000 24768019 chr2R 24768095 24768125 4 103 3.0 3.0 3.0 1.0 125 chr2R 24768000 5` UTR GstE12 - chr2R 24768062 5` UTR GstE12 - chr2R 24768125 5` UTR GstE12 - chr2R_4_24765001 chr2R_24765001 RAL-392 1035 chr2R 25101261 25101307 chr2R 25101383 25101402 7 116 5.0 3.0 4.0 1.4 141 chr2R 25101261 intron lov - chr2R 25101332 intron lov - chr2R 25101402 intron lov - chr2R_7_25100001 chr2R_25100001 RAL-392 1036 chr2R 25102521 25102544 chr2R 25102699 25102733 4 180 1.0 6.5 3.8 0.8 212 chr2R 25102521 intron lov - chr2R 25102627 intron lov - chr2R 25102733 intron lov - chr2R_4_25100001 chr2R_25100001 RAL-392 1037 chr2R 25104757 25104804 chr2R 25104902 25104947 16 139 2.5 3.0 2.8 4.2 190 chr2R 25104757 intron lov - chr2R 25104852 intron lov - chr2R 25104947 intron lov - chr2R_16_25100001 chr2R_25100001 RAL-392 1038 chr2R 25131003 25131045 chr2R 25131090 25131130 11 90 2.0 5.0 3.5 2.4 127 chr2R 25131003 intron lov - chr2R 25131066 intron lov - chr2R 25131130 intron lov - chr2R_11_25130001 chr2R_25130001 RAL-392 1039 chr2R 25141634 25141671 chr2R 25159344 25159355 roo 7 17701 7.0 3.5 5.2 1.1 17721 chr2R 25141634 intergenic not near genes chr2R 25150494 intergenic not near genes chr2R 25159355 intergenic not near genes chr2R_7_25150001 chr2R_25150001 RAL-392 1040 chr2R 25141672 25141676 chr2R 25159341 25159371 roo 5 17692 4.0 3.0 3.5 1.1 17699 chr2R 25141672 intergenic not near genes chr2R 25150522 intergenic not near genes chr2R 25159371 intergenic not near genes chr2R_5_25150001 chr2R_25150001 RAL-392 1041 chr2R 25171486 25171516 chr2R 25171583 25171613 9 95 4.5 8.5 6.5 1.2 127 chr2R 25171486 intergenic not near genes chr2R 25171550 intergenic not near genes chr2R 25171613 intergenic not near genes chr2R_9_25170001 chr2R_25170001 RAL-392 1042 chr2R 25175416 25175419 chr2R 25175467 25175522 4 87 2.0 0.5 1.2 1.8 106 chr2R 25175416 3` UTR Peb - chr2R 25175469 3` UTR Peb - chr2R 25175522 exon Peb - chr2R_4_25175001 chr2R_25175001 RAL-392 1043 chr2R 25193324 25193370 chr2R 25193486 25193527 11 159 2.5 2.5 2.5 3.1 203 chr2R 25193324 intron CG9380 - chr2R 25193426 intron CG9380 - chr2R 25193527 intron CG9380 - chr2R_11_25190001 chr2R_25190001 RAL-392 1044 chr2R 25234750 25234768 chr2R 25234850 25234852 4 96 7.5 7.0 7.2 0.5 102 chr2R 25234750 intron CG9380 - chr2R 25234801 intron CG9380 - chr2R 25234852 intron CG9380 - chr2R_4_25230001 chr2R_25230001 RAL-392 1045 chr2R 25234769 25234791 chr2R 25234844 25234876 10 89 5.0 6.0 5.5 1.5 107 chr2R 25234769 intron CG9380 - chr2R 25234822 intron CG9380 - chr2R 25234876 intron CG9380 - chr2R_10_25230001 chr2R_25230001 RAL-392 1046 chr3L 48744 48770 chr3L 48838 48850 8 91 13.5 5.0 9.2 0.8 106 chr3L 48744 intergenic not near genes chr3L 48797 intergenic not near genes chr3L 48850 intergenic not near genes chr3L_8_45001 chr3L_45001 RAL-392 1047 chr3L 58936 58947 chr3L 59019 59052 6 98 13.5 5.0 9.2 0.6 116 chr3L 58936 intergenic not near genes chr3L 58994 intergenic not near genes chr3L 59052 intergenic not near genes chr3L_6_55001 chr3L_55001 RAL-392 1048 chr3L 58951 58963 chr3L 59018 59064 7 96 9.5 5.0 7.2 0.9 113 chr3L 58951 intergenic not near genes chr3L 59008 intergenic not near genes chr3L 59064 intergenic not near genes chr3L_7_55001 chr3L_55001 RAL-392 1049 chr3L 110198 110230 chr3L 119385 119399 roo 12 9177 5.0 8.0 6.5 1.6 9201 chr3L 110198 intergenic not near genes chr3L 114798 intergenic not near genes chr3L 119399 intergenic not near genes chr3L_12_110001 chr3L_110001 RAL-392 1050 chr3L 382975 383020 chr3L 383088 383140 17 110 2.5 6.0 4.2 3.3 165 chr3L 382975 intron trh - chr3L 383058 intron trh - chr3L 383140 intron trh - chr3L_17_380001 chr3L_380001 RAL-392 1051 chr3L 402670 402714 chr3L 409743 409787 297 12 7067 3.0 12.0 7.5 1.4 7117 chr3L 402670 intergenic not near genes chr3L 406228 intergenic not near genes chr3L 409787 intergenic not near genes chr3L_12_405001 chr3L_405001 RAL-392 1052 chr3L 402715 402718 chr3L 409740 409791 297 5 7059 2.0 11.5 6.8 0.6 7076 chr3L 402715 intergenic not near genes chr3L 406253 intergenic not near genes chr3L 409791 intergenic not near genes chr3L_5_405001 chr3L_405001 RAL-392 1053 chr3L 421034 421085 chr3L 421142 421174 10 108 2.0 2.0 2.0 3.3 140 chr3L 421034 intergenic not near genes chr3L 421104 intergenic not near genes chr3L 421174 intergenic not near genes chr3L_10_420001 chr3L_420001 RAL-392 1054 chr3L 524748 524775 chr3L 524829 524871 5 96 0.0 3.5 1.8 1.8 123 chr3L 524748 intron klar - chr3L 524810 intron klar - chr3L 524871 intron klar - chr3L_5_520001 chr3L_520001 RAL-392 1055 chr3L 535036 535079 chr3L 535128 535148 13 93 4.0 5.5 4.8 2.2 112 chr3L 535036 intron klar - chr3L 535092 intron klar - chr3L 535148 intron klar - chr3L_13_535001 chr3L_535001 RAL-392 1056 chr3L 592945 592961 chr3L 593041 593057 6 94 7.5 9.0 8.2 0.7 112 chr3L 592945 intergenic MED14 + chr3L 593001 intergenic MED14 + chr3L 593057 intergenic MED14 + chr3L_6_590001 chr3L_590001 RAL-392 1057 chr3L 603034 603051 chr3L 603137 603148 4 100 8.0 0.0 4.0 0.8 114 chr3L 603034 intron CG13893 - chr3L 603091 intron CG13893 - chr3L 603148 intron CG13893 - chr3L_4_600001 chr3L_600001 RAL-392 1058 chr3L 642453 642499 chr3L 642564 642609 7 101 7.5 8.5 8.0 0.8 156 chr3L 642453 5` UTR CR43334 + chr3L 642531 5` UTR CR43334 + chr3L 642609 5` UTR CR43334 + chr3L_7_640001 chr3L_640001 RAL-392 1059 chr3L 650063 650107 chr3L 650173 650217 19 109 3.0 1.5 2.2 5.9 154 chr3L 650063 intron Gale + chr3L 650140 intron Gale + chr3L 650217 intron Gale + chr3L_19_650001 chr3L_650001 RAL-392 1060 chr3L 651367 651412 chr3L 651475 651516 20 100 4.5 7.0 5.8 2.9 149 chr3L 651367 intergenic Gale +,CG3402 - chr3L 651442 intergenic CG3402 -,Gale + chr3L 651516 intergenic CG3402 -,Gale + chr3L_20_650001 chr3L_650001 RAL-392 1061 chr3L 732801 732847 chr3L 733043 733062 10 233 4.0 4.5 4.2 1.9 261 chr3L 732801 intergenic not near genes chr3L 732932 intergenic not near genes chr3L 733062 intergenic not near genes chr3L_10_730001 chr3L_730001 RAL-392 1062 chr3L 768376 768406 chr3L 768489 768495 8 105 8.0 7.5 7.8 0.9 119 chr3L 768376 intergenic not near genes chr3L 768436 intergenic not near genes chr3L 768495 intergenic not near genes chr3L_8_765001 chr3L_765001 RAL-392 1063 chr3L 789899 789921 chr3L 790397 790419 roo 8 498 3.0 1.0 2.0 2.7 520 chr3L 789899 intergenic not near genes chr3L 790159 intergenic not near genes chr3L 790419 intergenic not near genes chr3L_8_790001 chr3L_790001 RAL-392 1064 chr3L 822076 822093 chr3L 822171 822193 7 99 0.0 11.0 5.5 1.1 117 chr3L 822076 intergenic not near genes chr3L 822134 intergenic not near genes chr3L 822193 intergenic not near genes chr3L_7_820001 chr3L_820001 RAL-392 1065 chr3L 854164 854205 chr3L 854262 854284 4 91 1.5 3.0 2.2 1.2 120 chr3L 854164 intron dpr20 - chr3L 854224 intron dpr20 - chr3L 854284 intron dpr20 - chr3L_4_850001 chr3L_850001 RAL-392 1066 chr3L 899994 899998 chr3L 900098 900102 4 104 0.0 10.5 5.2 0.6 108 chr3L 899994 intergenic not near genes chr3L 900048 intergenic not near genes chr3L 900102 intergenic not near genes chr3L_4_900001 chr3L_900001 RAL-392 1067 chr3L 900004 900006 chr3L 900086 900110 4 97 0.0 6.0 3.0 1.0 106 chr3L 900004 intergenic not near genes chr3L 900057 intergenic not near genes chr3L 900110 intergenic not near genes chr3L_4_900001 chr3L_900001 RAL-392 1068 chr3L 900007 900018 chr3L 900079 900122 5 98 0.0 3.5 1.8 1.8 115 chr3L 900007 intergenic not near genes chr3L 900064 intergenic not near genes chr3L 900122 intergenic not near genes chr3L_5_900001 chr3L_900001 RAL-392 1069 chr3L 908497 908523 chr3L 908637 908682 8 137 9.0 8.0 8.5 0.8 185 chr3L 908497 intergenic not near genes chr3L 908590 intergenic not near genes chr3L 908682 intergenic nerfin-1 + chr3L_8_905001 chr3L_905001 RAL-392 1070 chr3L 925179 925207 chr3L 932600 932653 mdg1 17 7430 4.5 5.0 4.8 2.9 7474 chr3L 925179 intron Glut1 + chr3L 928916 intron Glut1 + chr3L 932653 intron Glut1 + chr3L_17_925001 chr3L_925001 RAL-392 1071 chr3L 933888 933944 chr3L 934012 934067 12 122 4.5 3.5 4.0 2.4 179 chr3L 933888 intron Glut1 + chr3L 933978 intron Glut1 + chr3L 934067 intron Glut1 + chr3L_12_930001 chr3L_930001 RAL-392 1072 chr3L 939757 939804 chr3L 940896 940899 jockey 9 1125 7.0 8.5 7.8 1.0 1142 chr3L 939757 intron Glut1 + chr3L 940328 intron Glut1 + chr3L 940899 intron Glut1 + chr3L_9_940001 chr3L_940001 RAL-392 1073 chr3L 976552 976573 chr3L 976698 976713 4 144 0.5 4.5 2.5 1.1 161 chr3L 976552 intron Glut1 + chr3L 976632 intron Glut1 + chr3L 976713 intron Glut1 + chr3L_4_975001 chr3L_975001 RAL-392 1074 chr3L 1011207 1011224 chr3L 1011321 1011338 5 114 1.5 2.0 1.8 1.8 131 chr3L 1011207 intron trio - chr3L 1011272 intron trio - chr3L 1011338 intron trio - chr3L_5_1010001 chr3L_1010001 RAL-392 1075 chr3L 1021381 1021403 chr3L 1021456 1021457 4 72 8.5 5.5 7.0 0.5 76 chr3L 1021381 intron trio - chr3L 1021419 intron trio - chr3L 1021457 intron trio - chr3L_4_1020001 chr3L_1020001 RAL-392 1076 chr3L 1103976 1104010 chr3L 1104187 1104221 12 209 0.5 4.5 2.5 3.4 245 chr3L 1103976 intergenic not near genes chr3L 1104098 intergenic not near genes chr3L 1104221 intergenic not near genes chr3L_12_1100001 chr3L_1100001 RAL-392 1077 chr3L 1109617 1109667 chr3L 1109720 1109748 23 96 2.0 4.0 3.0 5.8 131 chr3L 1109617 intergenic not near genes chr3L 1109682 intergenic not near genes chr3L 1109748 intergenic not near genes chr3L_23_1105001 chr3L_1105001 RAL-392 1078 chr3L 1112256 1112267 chr3L 1112340 1112375 6 95 2.5 1.0 1.8 2.1 119 chr3L 1112256 intergenic not near genes chr3L 1112316 intergenic not near genes chr3L 1112375 intergenic not near genes chr3L_6_1110001 chr3L_1110001 RAL-392 1079 chr3L 1154118 1154161 chr3L 1163283 1163299 roo 8 9158 2.0 2.0 2.0 2.7 9181 chr3L 1154118 intron bab2 - chr3L 1158708 intron bab2 - chr3L 1163299 intron bab2 - chr3L_8_1155001 chr3L_1155001 RAL-392 1080 chr3L 1182899 1182950 chr3L 1183012 1183038 19 106 4.0 3.0 3.5 4.2 139 chr3L 1182899 intergenic not near genes chr3L 1182968 intergenic not near genes chr3L 1183038 intergenic not near genes chr3L_19_1180001 chr3L_1180001 RAL-392 1081 chr3L 1195350 1195384 chr3L 1195574 1195608 5 221 0.5 0.0 0.2 4.2 258 chr3L 1195350 intergenic LysX - chr3L 1195479 intergenic LysX - chr3L 1195608 intergenic LysX - chr3L_5_1195001 chr3L_1195001 RAL-392 1082 chr3L 1219595 1219623 chr3L 1227330 1227336 412 11 7730 3.0 4.0 3.5 2.4 7741 chr3L 1219595 intron mwh + chr3L 1223466 intron mwh + chr3L 1227336 intron mwh + chr3L_11_1220001 chr3L_1220001 RAL-392 1083 chr3L 1321557 1321589 chr3L 1321759 1321809 9 198 4.0 1.5 2.8 2.4 252 chr3L 1321557 intron Myo61F + chr3L 1321683 intron Myo61F + chr3L 1321809 intron,3` UTR Myo61F +,CG9184 - chr3L_9_1320001 chr3L_1320001 RAL-392 1084 chr3L 1396741 1396755 chr3L 1396841 1396855 4 98 24.5 9.0 16.8 0.2 114 chr3L 1396741 intron Ptp61F - chr3L 1396798 intron Ptp61F - chr3L 1396855 intron Ptp61F - chr3L_4_1395001 chr3L_1395001 RAL-392 1085 chr3L 1415777 1415807 chr3L 1415866 1415880 7 77 0.5 4.0 2.2 2.2 103 chr3L 1415777 intron Ptp61F - chr3L 1415828 intron Ptp61F - chr3L 1415880 intron Ptp61F - chr3L_7_1415001 chr3L_1415001 RAL-392 1086 chr3L 1501978 1502014 chr3L 1502079 1502089 4 86 3.5 7.5 5.5 0.6 111 chr3L 1501978 intron pUf68 - chr3L 1502034 intron pUf68 - chr3L 1502089 intron pUf68 - chr3L_4_1500001 chr3L_1500001 RAL-392 1087 chr3L 1505996 1506027 chr3L 1513592 1513644 17.6 10 7608 3.5 1.0 2.2 3.1 7648 chr3L 1505996 intron,intron Psa +,cue - chr3L 1509820 intron,intron Psa +,cue - chr3L 1513644 intron,intron Psa +,cue - chr3L_10_1505001 chr3L_1505001 RAL-392 1088 chr3L 1585909 1585936 chr3L 1586011 1586032 12 102 3.0 1.0 2.0 4.0 123 chr3L 1585909 intron CG13917 + chr3L 1585970 intron CG13917 + chr3L 1586032 intron CG13917 + chr3L_12_1585001 chr3L_1585001 RAL-392 1089 chr3L 1688226 1688269 chr3L 1688375 1688385 15 144 2.0 2.5 2.2 4.7 159 chr3L 1688226 intron CG7991 + chr3L 1688306 intron CG7991 + chr3L 1688385 intron CG7991 + chr3L_15_1685001 chr3L_1685001 RAL-392 1090 chr3L 1740850 1740885 chr3L 1741097 1741108 pogo 9 241 5.0 6.5 5.8 1.3 258 chr3L 1740850 intron Gk + chr3L 1740979 intron Gk + chr3L 1741108 intron Gk + chr3L_9_1740001 chr3L_1740001 RAL-392 1091 chr3L 1754690 1754721 chr3L 1754811 1754845 14 126 5.0 6.0 5.5 2.2 155 chr3L 1754690 intron Cht2 - chr3L 1754768 intron Cht2 - chr3L 1754845 intron Cht2 - chr3L_14_1750001 chr3L_1750001 RAL-392 1092 chr3L 1892992 1893026 chr3L 1893150 1893185 4 159 2.0 4.5 3.2 1.0 193 chr3L 1892992 intergenic CG1887 - chr3L 1893088 intergenic CG1887 - chr3L 1893185 intergenic CG1887 - chr3L_4_1890001 chr3L_1890001 RAL-392 1093 chr3L 1924966 1924974 chr3L 1925118 1925132 4 156 1.0 5.0 3.0 1.0 166 chr3L 1924966 exon Dbx + chr3L 1925049 intron Dbx + chr3L 1925132 intron Dbx + chr3L_4_1925001 chr3L_1925001 RAL-392 1094 chr3L 1988848 1988865 chr3L 1989029 1989054 5 189 2.0 3.0 2.5 1.4 206 chr3L 1988848 intergenic not near genes chr3L 1988951 intergenic not near genes chr3L 1989054 intergenic not near genes chr3L_5_1985001 chr3L_1985001 RAL-392 1095 chr3L 2108228 2108283 chr3L 2113452 2113507 copia 15 5223 2.0 6.0 4.0 3.0 5279 chr3L 2108228 intron sls - chr3L 2110868 intron sls - chr3L 2113507 intron sls - chr3L_15_2110001 chr3L_2110001 RAL-392 1096 chr3L 2113776 2113792 chr3L 2113873 2113889 5 96 0.0 3.5 1.8 1.8 113 chr3L 2113776 intron sls - chr3L 2113832 intron sls - chr3L 2113889 intron sls - chr3L_5_2110001 chr3L_2110001 RAL-392 1097 chr3L 2139187 2139234 chr3L 2139288 2139334 24 96 3.5 2.5 3.0 6.0 147 chr3L 2139187 intron zormin - chr3L 2139260 intron zormin - chr3L 2139334 intron zormin - chr3L_24_2135001 chr3L_2135001 RAL-392 1098 chr3L 2168786 2168808 chr3L 2168861 2168884 13 89 2.0 5.5 3.8 2.7 98 chr3L 2168786 intron CG15879 - chr3L 2168835 intron CG15879 - chr3L 2168884 intron CG15879 - chr3L_13_2165001 chr3L_2165001 RAL-392 1099 chr3L 2199804 2199821 chr3L 2199889 2199917 8 87 1.5 6.5 4.0 1.6 113 chr3L 2199804 intergenic not near genes chr3L 2199860 intergenic not near genes chr3L 2199917 intergenic not near genes chr3L_8_2195001 chr3L_2195001 RAL-392 1100 chr3L 2272970 2272980 chr3L 2273070 2273080 4 100 2.5 5.0 3.8 0.8 110 chr3L 2272970 intergenic yellow-g - chr3L 2273025 intergenic yellow-g - chr3L 2273080 intergenic yellow-g - chr3L_4_2270001 chr3L_2270001 RAL-392 1101 chr3L 2272981 2272998 chr3L 2273066 2273098 8 97 2.5 5.0 3.8 1.7 117 chr3L 2272981 intergenic yellow-g - chr3L 2273040 intergenic yellow-g - chr3L 2273098 intergenic yellow-g - chr3L_8_2270001 chr3L_2270001 RAL-392 1102 chr3L 2285504 2285539 chr3L 2285604 2285637 5 95 2.5 3.0 2.8 1.3 133 chr3L 2285504 intron MsR2 + chr3L 2285570 intron MsR2 + chr3L 2285637 intron MsR2 + chr3L_5_2285001 chr3L_2285001 RAL-392 1103 chr3L 2307986 2308024 chr3L 2308112 2308149 8 122 8.5 3.5 6.0 1.1 163 chr3L 2307986 intergenic not near genes chr3L 2308068 intergenic not near genes chr3L 2308149 intergenic not near genes chr3L_8_2305001 chr3L_2305001 RAL-392 1104 chr3L 2321140 2321192 chr3L 2321237 2321272 9 87 5.5 4.5 5.0 1.5 132 chr3L 2321140 intergenic not near genes chr3L 2321206 intergenic not near genes chr3L 2321272 intergenic not near genes chr3L_9_2320001 chr3L_2320001 RAL-392 1105 chr3L 2331568 2331596 chr3L 2331665 2331693 7 91 7.5 2.5 5.0 1.2 125 chr3L 2331568 intron MsR1 + chr3L 2331630 intron MsR1 + chr3L 2331693 intron MsR1 + chr3L_7_2330001 chr3L_2330001 RAL-392 1106 chr3L 2348118 2348141 chr3L 2348204 2348206 9 89 2.0 4.5 3.2 2.1 88 chr3L 2348118 intergenic not near genes chr3L 2348162 intergenic not near genes chr3L 2348206 intergenic not near genes chr3L_9_2345001 chr3L_2345001 RAL-392 1107 chr3L 2447486 2447530 chr3L 2456661 2456706 roo 6 9164 6.5 4.0 5.2 1.0 9220 chr3L 2447486 intron CG45186 + chr3L 2452096 intron CG45186 + chr3L 2456706 intron CG45186 + chr3L_6_2450001 chr3L_2450001 RAL-392 1108 chr3L 2467474 2467477 chr3L 2467591 2467594 4 117 3.5 0.0 1.8 1.4 120 chr3L 2467474 intron CG45186 + chr3L 2467534 intron CG45186 + chr3L 2467594 intron CG45186 + chr3L_4_2465001 chr3L_2465001 RAL-392 1109 chr3L 2478885 2479037 chr3L 2478985 2479119 12 95 5.0 5.0 5.0 2.0 234 chr3L 2478885 intron CG45186 + chr3L 2479002 intron CG45186 + chr3L 2479119 intron CG45186 + chr3L_12_2475001 chr3L_2475001 RAL-392 1110 chr3L 2479476 2479483 chr3L 2479574 2479592 5 105 0.0 10.5 5.2 0.8 116 chr3L 2479476 intron CG45186 + chr3L 2479534 intron CG45186 + chr3L 2479592 intron CG45186 + chr3L_5_2475001 chr3L_2475001 RAL-392 1111 chr3L 2502109 2502125 chr3L 2502202 2502202 5 90 1.0 6.5 3.8 1.0 93 chr3L 2502109 intron CG16758 - chr3L 2502156 intron CG16758 - chr3L 2502202 intron CG16758 - chr3L_5_2500001 chr3L_2500001 RAL-392 1112 chr3L 2502134 2502147 chr3L 2502197 2502243 6 88 1.0 5.0 3.0 1.5 109 chr3L 2502134 intron CG16758 - chr3L 2502188 intron CG16758 - chr3L 2502243 intron CG16758 - chr3L_6_2500001 chr3L_2500001 RAL-392 1113 chr3L 2515420 2515425 chr3L 2515517 2515527 5 101 10.0 14.5 12.2 0.4 107 chr3L 2515420 intron Spn - chr3L 2515474 intron Spn - chr3L 2515527 intron Spn - chr3L_5_2515001 chr3L_2515001 RAL-392 1114 chr3L 2518254 2518267 chr3L 2518327 2518360 6 93 7.0 2.5 4.8 1.0 106 chr3L 2518254 intron,intron Spn -,CR45170 + chr3L 2518307 intron,5` UTR Spn -,CR45170 + chr3L 2518360 intron,5` UTR Spn -,CR45170 + chr3L_6_2515001 chr3L_2515001 RAL-392 1115 chr3L 2523522 2523532 chr3L 2523607 2523632 5 94 5.0 7.5 6.2 0.7 110 chr3L 2523522 intron Spn - chr3L 2523577 intron Spn - chr3L 2523632 intron Spn - chr3L_5_2520001 chr3L_2520001 RAL-392 1116 chr3L 2533666 2533672 chr3L 2533728 2533732 4 71 3.0 5.0 4.0 0.8 66 chr3L 2533666 intron Spn - chr3L 2533699 intron Spn - chr3L 2533732 intron Spn - chr3L_4_2530001 chr3L_2530001 RAL-392 1117 chr3L 2561512 2561561 chr3L 2561608 2561658 12 84 3.0 4.5 3.8 2.5 146 chr3L 2561512 intron msn - chr3L 2561585 intron msn - chr3L 2561658 intron msn - chr3L_12_2560001 chr3L_2560001 RAL-392 1118 chr3L 2644532 2644578 chr3L 2644625 2644631 13 93 5.0 3.0 4.0 2.6 99 chr3L 2644532 intergenic not near genes chr3L 2644582 intergenic not near genes chr3L 2644631 intergenic not near genes chr3L_13_2640001 chr3L_2640001 RAL-392 1119 chr3L 2683924 2683973 chr3L 2684020 2684069 17 94 6.0 5.0 5.5 2.6 145 chr3L 2683924 intron Fife - chr3L 2683996 intron Fife - chr3L 2684069 intron Fife - chr3L_17_2680001 chr3L_2680001 RAL-392 1120 chr3L 2719524 2719535 chr3L 2719646 2719657 5 122 6.0 6.0 6.0 0.7 133 chr3L 2719524 3` UTR Mrtf - chr3L 2719590 3` UTR Mrtf - chr3L 2719657 3` UTR Mrtf - chr3L_5_2715001 chr3L_2715001 RAL-392 1121 chr3L 2719538 2719559 chr3L 2719639 2719651 4 102 3.0 4.0 3.5 0.9 113 chr3L 2719538 3` UTR Mrtf - chr3L 2719594 3` UTR Mrtf - chr3L 2719651 3` UTR Mrtf - chr3L_4_2715001 chr3L_2715001 RAL-392 1122 chr3L 2751448 2751451 chr3L 2755755 2755761 F-element 4 4312 15.0 10.0 12.5 0.3 4313 chr3L 2751448 intron Mrtf - chr3L 2753604 intron Mrtf - chr3L 2755761 intron Mrtf - chr3L_4_2750001 chr3L_2750001 RAL-392 1123 chr3L 2795716 2795748 chr3L 2795848 2795880 12 133 4.0 3.5 3.8 2.5 164 chr3L 2795716 intron CG43444 - chr3L 2795798 intron CG43444 - chr3L 2795880 intron CG43444 - chr3L_12_2795001 chr3L_2795001 RAL-392 1124 chr3L 2863780 2863818 chr3L 2863880 2863886 4 88 5.5 0.0 2.8 1.1 106 chr3L 2863780 intron CG43444 - chr3L 2863833 intron CG43444 - chr3L 2863886 intron CG43444 - chr3L_4_2860001 chr3L_2860001 RAL-392 1125 chr3L 2876652 2876699 chr3L 2876772 2876819 10 118 1.0 2.0 1.5 4.0 167 chr3L 2876652 intron CG43444 - chr3L 2876736 intron CG43444 - chr3L 2876819 intron CG43444 - chr3L_10_2875001 chr3L_2875001 RAL-392 1126 chr3L 2927821 2927868 chr3L 2936118 2936165 Tirant 6 8286 2.0 6.0 4.0 1.2 8344 chr3L 2927821 intron Shab + chr3L 2931993 intron Shab + chr3L 2936165 intron Shab + chr3L_6_2930001 chr3L_2930001 RAL-392 1127 chr3L 2954484 2954535 chr3L 2954593 2954630 21 105 1.0 0.5 0.8 11.7 146 chr3L 2954484 intron Shab + chr3L 2954557 intron Shab + chr3L 2954630 intron Shab + chr3L_21_2950001 chr3L_2950001 RAL-392 1128 chr3L 3028321 3028373 chr3L 3028420 3028436 8 89 4.0 2.0 3.0 2.0 115 chr3L 3028321 intergenic not near genes chr3L 3028378 intergenic not near genes chr3L 3028436 intergenic not near genes chr3L_8_3025001 chr3L_3025001 RAL-392 1129 chr3L 3028988 3029022 chr3L 3029094 3029128 6 106 7.5 0.0 3.8 1.2 140 chr3L 3028988 intergenic not near genes chr3L 3029058 intergenic not near genes chr3L 3029128 intergenic not near genes chr3L_6_3025001 chr3L_3025001 RAL-392 1130 chr3L 3034339 3034386 chr3L 3034438 3034485 11 93 6.5 3.5 5.0 1.8 146 chr3L 3034339 intergenic not near genes chr3L 3034412 intergenic not near genes chr3L 3034485 intergenic not near genes chr3L_11_3030001 chr3L_3030001 RAL-392 1131 chr3L 3050888 3050905 chr3L 3050983 3050992 8 101 7.5 1.5 4.5 1.5 104 chr3L 3050888 intron CG32485 + chr3L 3050940 intron CG32485 + chr3L 3050992 intron CG32485 + chr3L_8_3050001 chr3L_3050001 RAL-392 1132 chr3L 3051724 3051745 chr3L 3051985 3052007 pogo 8 262 7.0 2.0 4.5 1.5 283 chr3L 3051724 3` UTR CG32485 + chr3L 3051866 intergenic CG32485 + chr3L 3052007 intergenic CG32485 + chr3L_8_3050001 chr3L_3050001 RAL-392 1133 chr3L 3252325 3252374 chr3L 3252421 3252470 8 95 3.0 1.0 2.0 2.7 145 chr3L 3252325 5` UTR CR43626 + chr3L 3252398 5` UTR CR43626 + chr3L 3252470 5` UTR CR43626 + chr3L_8_3250001 chr3L_3250001 RAL-392 1134 chr3L 3259639 3259831 chr3L 3259742 3259951 11 94 0.0 2.0 1.0 5.5 312 chr3L 3259639 intron ckd + chr3L 3259795 intron ckd + chr3L 3259951 intron ckd + chr3L_11_3255001 chr3L_3255001 RAL-392 1135 chr3L 3281424 3281476 chr3L 3281933 3281962 Doc 6 509 2.5 6.0 4.2 1.2 538 chr3L 3281424 intron CG12017 + chr3L 3281693 intron CG12017 + chr3L 3281962 intron CG12017 + chr3L_6_3280001 chr3L_3280001 RAL-392 1136 chr3L 3285624 3285661 chr3L 3285727 3285734 11 100 6.0 3.5 4.8 1.9 110 chr3L 3285624 intron CG12017 + chr3L 3285679 intron CG12017 + chr3L 3285734 intron CG12017 + chr3L_11_3285001 chr3L_3285001 RAL-392 1137 chr3L 3317511 3317562 chr3L 3317610 3317661 25 95 1.0 5.0 3.0 6.2 150 chr3L 3317511 intergenic Drsl5 + chr3L 3317586 intergenic PIG-C -,Drsl5 + chr3L 3317661 intergenic PIG-C - chr3L_25_3315001 chr3L_3315001 RAL-392 1138 chr3L 3431922 3431964 chr3L 3432039 3432055 9 105 3.5 1.5 2.5 2.6 133 chr3L 3431922 intron eIF5B - chr3L 3431988 intron eIF5B - chr3L 3432055 intron eIF5B - chr3L_9_3430001 chr3L_3430001 RAL-392 1139 chr3L 3475082 3475106 chr3L 3475524 3475525 jockey 6 447 2.5 3.5 3.0 1.5 443 chr3L 3475082 intron CG42324 + chr3L 3475304 intron CG42324 + chr3L 3475525 intron CG42324 + chr3L_6_3475001 chr3L_3475001 RAL-392 1140 chr3L 3484405 3484439 chr3L 3484491 3484536 4 93 8.5 4.5 6.5 0.5 131 chr3L 3484405 intron,intron CG42324 +,CG43074 - chr3L 3484470 intron,exon CG42324 +,CG43074 - chr3L 3484536 intron,intron CG42324 +,CG43074 - chr3L_4_3480001 chr3L_3480001 RAL-392 1141 chr3L 3601281 3601304 chr3L 3606612 3606635 copia 5 5331 12.0 3.5 7.8 0.6 5354 chr3L 3601281 intron Eip63E + chr3L 3603958 intron Eip63E + chr3L 3606635 intron Eip63E + chr3L_5_3600001 chr3L_3600001 RAL-392 1142 chr3L 3601305 3601331 chr3L 3606610 3606662 copia 7 5321 4.5 3.5 4.0 1.4 5357 chr3L 3601305 intron Eip63E + chr3L 3603984 intron Eip63E + chr3L 3606662 intron Eip63E + chr3L_7_3600001 chr3L_3600001 RAL-392 1143 chr3L 3763743 3763748 chr3L 3763844 3763846 4 100 6.5 1.5 4.0 0.8 103 chr3L 3763743 intron CG32264 - chr3L 3763794 intron CG32264 - chr3L 3763846 intron CG32264 - chr3L_4_3760001 chr3L_3760001 RAL-392 1144 chr3L 3766723 3766745 chr3L 3766829 3766849 11 106 4.0 5.0 4.5 2.0 126 chr3L 3766723 intron CG32264 - chr3L 3766786 intron CG32264 - chr3L 3766849 intron CG32264 - chr3L_11_3765001 chr3L_3765001 RAL-392 1145 chr3L 3797219 3797262 chr3L 3797322 3797365 17 98 0.5 3.0 1.8 6.1 146 chr3L 3797219 intron CG32264 - chr3L 3797292 intron CG32264 - chr3L 3797365 intron CG32264 - chr3L_17_3795001 chr3L_3795001 RAL-392 1146 chr3L 3815034 3815079 chr3L 3815135 3815180 15 97 5.0 5.5 5.2 2.4 146 chr3L 3815034 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815107 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815180 intron,intron Scsalpha +,CR43932 - chr3L_15_3815001 chr3L_3815001 RAL-392 1147 chr3L 3833730 3833763 chr3L 3833991 3834024 pogo 5 256 7.0 4.0 5.5 0.8 294 chr3L 3833730 intron enc + chr3L 3833877 intron enc + chr3L 3834024 intron enc + chr3L_5_3830001 chr3L_3830001 RAL-392 1148 chr3L 3877440 3877467 chr3L 3877583 3877610 4 143 0.0 6.0 3.0 1.0 170 chr3L 3877440 intergenic not near genes chr3L 3877525 intergenic not near genes chr3L 3877610 intergenic not near genes chr3L_4_3875001 chr3L_3875001 RAL-392 1149 chr3L 3889112 3889138 chr3L 3889215 3889241 10 103 3.5 2.0 2.8 2.6 129 chr3L 3889112 intergenic not near genes chr3L 3889176 intergenic not near genes chr3L 3889241 intergenic not near genes chr3L_10_3885001 chr3L_3885001 RAL-392 1150 chr3L 3925988 3926043 chr3L 3926099 3926143 9 111 2.5 0.5 1.5 3.6 155 chr3L 3925988 intron Eip63F-1 - chr3L 3926066 intron Eip63F-1 - chr3L 3926143 intron Eip63F-1 - chr3L_9_3925001 chr3L_3925001 RAL-392 1151 chr3L 3946191 3946209 chr3L 3946270 3946302 4 81 2.5 5.5 4.0 0.8 111 chr3L 3946191 3` UTR CG14982 + chr3L 3946246 3` UTR CG14982 + chr3L 3946302 3` UTR CG14982 + chr3L_4_3945001 chr3L_3945001 RAL-392 1152 chr3L 4015726 4015767 chr3L 4015815 4015845 11 89 3.0 3.5 3.2 2.6 119 chr3L 4015726 intergenic not near genes chr3L 4015786 intergenic not near genes chr3L 4015845 intergenic not near genes chr3L_11_4015001 chr3L_4015001 RAL-392 1153 chr3L 4040710 4040727 chr3L 4040810 4040831 4 98 6.0 11.0 8.5 0.4 121 chr3L 4040710 exon Rcd5 + chr3L 4040770 exon Rcd5 + chr3L 4040831 exon Rcd5 + chr3L_4_4040001 chr3L_4040001 RAL-392 1154 chr3L 4146807 4146841 chr3L 4146906 4146938 14 99 0.5 5.5 3.0 3.5 131 chr3L 4146807 intergenic not near genes chr3L 4146872 intergenic not near genes chr3L 4146938 intergenic not near genes chr3L_14_4145001 chr3L_4145001 RAL-392 1155 chr3L 4170134 4170167 chr3L 4170231 4170265 4 98 1.5 1.0 1.2 1.8 131 chr3L 4170134 intergenic Ero1L + chr3L 4170200 intergenic Ero1L + chr3L 4170265 intergenic Ero1L + chr3L_4_4170001 chr3L_4170001 RAL-392 1156 chr3L 4214517 4214546 chr3L 4214679 4214691 10 157 4.5 3.5 4.0 2.0 174 chr3L 4214517 intron CG43367 + chr3L 4214604 intron CG43367 + chr3L 4214691 intron CG43367 + chr3L_10_4210001 chr3L_4210001 RAL-392 1157 chr3L 4328735 4328754 chr3L 4336249 4336272 412 6 7514 3.5 6.0 4.8 1.0 7537 chr3L 4328735 intron Cip4 - chr3L 4332504 intron Cip4 - chr3L 4336272 exon Cip4 - chr3L_6_4330001 chr3L_4330001 RAL-392 1158 chr3L 4328756 4328764 chr3L 4336246 4336271 412 5 7504 1.5 5.5 3.5 1.1 7515 chr3L 4328756 intron Cip4 - chr3L 4332514 intron Cip4 - chr3L 4336271 exon Cip4 - chr3L_5_4330001 chr3L_4330001 RAL-392 1159 chr3L 4341330 4341331 chr3L 21448026 21448027 7 17106696 15.0 14.5 14.8 0.4 17106697 chr3L 4341330 intron Cip4 - chr3L 12894678 3` UTR CG14118 + chr3L 21448027 3` UTR Syx7 + chr3L_7_12890001 chr3L_12890001 RAL-392 1160 chr3L 4341332 4341335 chr3L 21448023 21448026 4 17106692 15.0 15.0 15.0 0.2 17106694 chr3L 4341332 intron Cip4 - chr3L 12894679 3` UTR CG14118 + chr3L 21448026 3` UTR Syx7 + chr3L_4_12890001 chr3L_12890001 RAL-392 1161 chr3L 4390017 4390035 chr3L 4390116 4390119 4 95 6.5 2.5 4.5 0.7 102 chr3L 4390017 intron slow + chr3L 4390068 intron slow + chr3L 4390119 intron slow + chr3L_4_4390001 chr3L_4390001 RAL-392 1162 chr3L 4484731 4484744 chr3L 4484829 4484842 7 97 6.0 9.5 7.8 0.8 111 chr3L 4484731 intergenic CG11350 +,CG13722 - chr3L 4484786 intergenic CG13722 -,CG11350 + chr3L 4484842 intergenic CG13722 -,CG11350 + chr3L_7_4480001 chr3L_4480001 RAL-392 1163 chr3L 4491370 4491413 chr3L 4491475 4491526 14 112 5.5 1.0 3.2 3.3 156 chr3L 4491370 intergenic CG13722 - chr3L 4491448 intergenic CG13722 - chr3L 4491526 intergenic not near genes chr3L_14_4490001 chr3L_4490001 RAL-392 1164 chr3L 4597211 4597232 chr3L 4597297 4597303 6 89 5.5 10.0 7.8 0.7 92 chr3L 4597211 intron Src64B - chr3L 4597257 intron Src64B - chr3L 4597303 intron Src64B - chr3L_6_4595001 chr3L_4595001 RAL-392 1165 chr3L 4597234 4597246 chr3L 4597296 4597336 6 78 5.5 10.0 7.8 0.7 102 chr3L 4597234 intron Src64B - chr3L 4597285 intron Src64B - chr3L 4597336 intron Src64B - chr3L_6_4595001 chr3L_4595001 RAL-392 1166 chr3L 4652550 4652601 chr3L 4652653 4652705 22 91 5.0 3.0 4.0 4.4 155 chr3L 4652550 intron axo - chr3L 4652628 intron axo - chr3L 4652705 intron axo - chr3L_22_4650001 chr3L_4650001 RAL-392 1167 chr3L 4657964 4658001 chr3L 4658446 4658483 5 482 2.5 6.5 4.5 0.9 519 chr3L 4657964 intron axo - chr3L 4658224 intron axo - chr3L 4658483 intron axo - chr3L_5_4655001 chr3L_4655001 RAL-392 1168 chr3L 4726440 4726459 chr3L 4726510 4726557 5 89 10.0 8.5 9.2 0.5 117 chr3L 4726440 intron RhoGEF64C + chr3L 4726498 intron RhoGEF64C + chr3L 4726557 intron RhoGEF64C + chr3L_5_4725001 chr3L_4725001 RAL-392 1169 chr3L 4742030 4742053 chr3L 4742298 4742316 7 263 11.0 5.5 8.2 0.8 286 chr3L 4742030 intron RhoGEF64C + chr3L 4742173 intron RhoGEF64C + chr3L 4742316 intron RhoGEF64C + chr3L_7_4740001 chr3L_4740001 RAL-392 1170 chr3L 4742062 4742068 chr3L 4742288 4742336 4 256 3.0 4.5 3.8 0.8 274 chr3L 4742062 intron RhoGEF64C + chr3L 4742199 intron RhoGEF64C + chr3L 4742336 intron RhoGEF64C + chr3L_4_4740001 chr3L_4740001 RAL-392 1171 chr3L 4748705 4748714 chr3L 4748799 4748825 5 103 4.5 2.0 3.2 1.2 120 chr3L 4748705 intron RhoGEF64C + chr3L 4748765 intron RhoGEF64C + chr3L 4748825 intron RhoGEF64C + chr3L_5_4745001 chr3L_4745001 RAL-392 1172 chr3L 4782092 4782112 chr3L 4782205 4782210 5 109 8.5 0.5 4.5 0.9 118 chr3L 4782092 intron RhoGEF64C + chr3L 4782151 intron RhoGEF64C + chr3L 4782210 intron RhoGEF64C + chr3L_5_4780001 chr3L_4780001 RAL-392 1173 chr3L 4901114 4901155 chr3L 4907324 4907365 diver 13 6208 5.0 5.0 5.0 2.2 6251 chr3L 4901114 intergenic CG13704 + chr3L 4904240 intergenic not near genes chr3L 4907365 intergenic not near genes chr3L_13_4900001 chr3L_4900001 RAL-392 1174 chr3L 4907960 4907977 chr3L 4908056 4908065 6 95 4.0 1.0 2.5 1.7 105 chr3L 4907960 intergenic not near genes chr3L 4908012 intergenic not near genes chr3L 4908065 intergenic not near genes chr3L_6_4905001 chr3L_4905001 RAL-392 1175 chr3L 5034165 5034189 chr3L 5043309 5043361 roo 8 9166 4.0 6.0 5.0 1.3 9196 chr3L 5034165 intron Con - chr3L 5038763 intron Con - chr3L 5043361 intron Con - chr3L_8_5035001 chr3L_5035001 RAL-392 1176 chr3L 5045440 5045455 chr3L 5050241 5050252 Doc 4 4800 8.5 4.0 6.2 0.6 4812 chr3L 5045440 intron Con - chr3L 5047846 intron Con - chr3L 5050252 intron Con - chr3L_4_5045001 chr3L_5045001 RAL-392 1177 chr3L 5045467 5045487 chr3L 5050238 5050258 Doc 7 4787 5.0 3.5 4.2 1.3 4791 chr3L 5045467 intron Con - chr3L 5047862 intron Con - chr3L 5050258 intron Con - chr3L_7_5045001 chr3L_5045001 RAL-392 1178 chr3L 5103600 5103632 chr3L 5103691 5103700 6 93 4.0 0.0 2.0 2.0 100 chr3L 5103600 intergenic not near genes chr3L 5103650 intergenic not near genes chr3L 5103700 intergenic not near genes chr3L_6_5100001 chr3L_5100001 RAL-392 1179 chr3L 5104464 5104511 chr3L 5124618 5124661 15 20150 4.0 1.5 2.8 3.9 20197 chr3L 5104464 intergenic not near genes chr3L 5114562 intergenic not near genes chr3L 5124661 intergenic not near genes chr3L_15_5110001 chr3L_5110001 RAL-392 1180 chr3L 5164545 5164588 chr3L 5164673 5164726 17 131 3.5 4.5 4.0 3.4 181 chr3L 5164545 intron shep - chr3L 5164636 intron shep - chr3L 5164726 intron shep - chr3L_17_5160001 chr3L_5160001 RAL-392 1181 chr3L 5220815 5220860 chr3L 5220925 5220974 4 114 1.0 5.5 3.2 1.0 159 chr3L 5220815 intron shep - chr3L 5220894 intron shep - chr3L 5220974 intron shep - chr3L_4_5220001 chr3L_5220001 RAL-392 1182 chr3L 5261148 5261174 chr3L 5261247 5261273 9 95 11.0 4.5 7.8 1.0 125 chr3L 5261148 intron shep - chr3L 5261210 intron shep - chr3L 5261273 intron shep - chr3L_9_5260001 chr3L_5260001 RAL-392 1183 chr3L 5299144 5299182 chr3L 5306600 5306635 Quasimodo 15 7455 2.5 7.5 5.0 2.5 7491 chr3L 5299144 intergenic not near genes chr3L 5302890 intergenic not near genes chr3L 5306635 intergenic not near genes chr3L_15_5300001 chr3L_5300001 RAL-392 1184 chr3L 5327444 5327473 chr3L 5327549 5327578 11 103 2.0 1.5 1.8 3.9 134 chr3L 5327444 intergenic not near genes chr3L 5327511 intergenic not near genes chr3L 5327578 intergenic not near genes chr3L_11_5325001 chr3L_5325001 RAL-392 1185 chr3L 5351084 5351126 chr3L 5351189 5351231 18 104 7.0 3.5 5.2 2.9 147 chr3L 5351084 intron lama - chr3L 5351158 intron lama - chr3L 5351231 intron lama - chr3L_18_5350001 chr3L_5350001 RAL-392 1186 chr3L 5388187 5388225 chr3L 5388528 5388556 8 332 6.0 3.5 4.8 1.4 369 chr3L 5388187 intergenic not near genes chr3L 5388372 intergenic not near genes chr3L 5388556 intergenic not near genes chr3L_8_5385001 chr3L_5385001 RAL-392 1187 chr3L 5396495 5396499 chr3L 5396582 5396600 5 102 0.0 1.5 0.8 2.8 105 chr3L 5396495 intergenic not near genes chr3L 5396548 intergenic not near genes chr3L 5396600 intergenic not near genes chr3L_5_5395001 chr3L_5395001 RAL-392 1188 chr3L 5449521 5449559 chr3L 5449614 5449658 10 93 6.5 3.5 5.0 1.7 137 chr3L 5449521 intergenic not near genes chr3L 5449590 intergenic not near genes chr3L 5449658 intergenic not near genes chr3L_10_5445001 chr3L_5445001 RAL-392 1189 chr3L 5490365 5490399 chr3L 5490531 5490565 9 163 2.5 1.0 1.8 3.2 200 chr3L 5490365 intergenic not near genes chr3L 5490465 intergenic not near genes chr3L 5490565 intergenic not near genes chr3L_9_5490001 chr3L_5490001 RAL-392 1190 chr3L 5504539 5504570 chr3L 5504637 5504643 8 92 4.0 4.0 4.0 1.6 104 chr3L 5504539 intron CG34342 - chr3L 5504591 intron CG34342 - chr3L 5504643 intron CG34342 - chr3L_8_5500001 chr3L_5500001 RAL-392 1191 chr3L 5537729 5537757 chr3L 5538061 5538069 jockey 11 346 4.0 4.0 4.0 2.2 340 chr3L 5537729 intergenic not near genes chr3L 5537899 intergenic not near genes chr3L 5538069 intergenic CG10625 - chr3L_11_5535001 chr3L_5535001 RAL-392 1192 chr3L 5650351 5650357 chr3L 5650439 5650453 4 94 9.0 5.5 7.2 0.5 102 chr3L 5650351 3` UTR Blimp-1 + chr3L 5650402 3` UTR Blimp-1 + chr3L 5650453 3` UTR Blimp-1 + chr3L_4_5650001 chr3L_5650001 RAL-392 1193 chr3L 5650365 5650383 chr3L 5650426 5650460 12 82 5.0 4.5 4.8 2.1 95 chr3L 5650365 3` UTR Blimp-1 + chr3L 5650412 3` UTR Blimp-1 + chr3L 5650460 3` UTR Blimp-1 + chr3L_12_5650001 chr3L_5650001 RAL-392 1194 chr3L 5716407 5716431 chr3L 5716497 5716527 6 95 6.5 3.5 5.0 1.0 120 chr3L 5716407 intron sif + chr3L 5716467 intron sif + chr3L 5716527 intron sif + chr3L_6_5715001 chr3L_5715001 RAL-392 1195 chr3L 5910011 5910062 chr3L 5910272 5910323 pogo 22 259 10.0 6.5 8.2 2.4 312 chr3L 5910011 intron CG13288 + chr3L 5910167 intron CG13288 + chr3L 5910323 intron CG13288 + chr3L_22_5910001 chr3L_5910001 RAL-392 1196 chr3L 5926328 5926347 chr3L 5926509 5926557 BS 6 183 2.0 5.5 3.8 1.2 229 chr3L 5926328 intron Vap-33B + chr3L 5926442 intron Vap-33B + chr3L 5926557 intron Vap-33B + chr3L_6_5925001 chr3L_5925001 RAL-392 1197 chr3L 6040347 6040389 chr3L 6042723 6042731 Doc 12 2370 2.5 3.5 3.0 3.0 2384 chr3L 6040347 intergenic Jon65Aiv + chr3L 6041539 intergenic not near genes chr3L 6042731 intergenic not near genes chr3L_12_6040001 chr3L_6040001 RAL-392 1198 chr3L 6052648 6052657 chr3L 6052738 6052741 4 95 9.0 4.5 6.8 0.5 93 chr3L 6052648 exon Jon65Aii + chr3L 6052694 intron Jon65Aii + chr3L 6052741 exon Jon65Aii + chr3L_4_6050001 chr3L_6050001 RAL-392 1199 chr3L 6057355 6057371 chr3L 6057465 6057472 5 104 10.5 6.0 8.2 0.5 117 chr3L 6057355 intergenic tan + chr3L 6057414 intergenic tan + chr3L 6057472 intergenic tan + chr3L_5_6055001 chr3L_6055001 RAL-392 1200 chr3L 6155700 6155713 chr3L 6155806 6155818 4 106 6.5 1.0 3.8 0.8 118 chr3L 6155700 intergenic CR45421 - chr3L 6155759 intergenic not near genes chr3L 6155818 intergenic not near genes chr3L_4_6155001 chr3L_6155001 RAL-392 1201 chr3L 6169113 6169133 chr3L 6169209 6169234 14 98 10.5 9.0 9.8 1.3 121 chr3L 6169113 3` UTR CG10289 - chr3L 6169174 3` UTR CG10289 - chr3L 6169234 3` UTR CG10289 - chr3L_14_6165001 chr3L_6165001 RAL-392 1202 chr3L 6220906 6220945 chr3L 6230074 6230107 roo 15 9164 4.5 12.5 8.5 1.6 9201 chr3L 6220906 5` UTR pncr008:3L + chr3L 6225506 intergenic not near genes chr3L 6230107 intergenic not near genes chr3L_15_6225001 chr3L_6225001 RAL-392 1203 chr3L 6261819 6261854 chr3L 6262100 6262129 5 280 7.0 5.0 6.0 0.7 310 chr3L 6261819 intron ImpL3 - chr3L 6261974 intron ImpL3 - chr3L 6262129 intron ImpL3 - chr3L_5_6260001 chr3L_6260001 RAL-392 1204 chr3L 6335004 6335041 chr3L 6335485 6335516 297 11 484 3.0 9.5 6.2 1.5 512 chr3L 6335004 intron CG13300 - chr3L 6335260 intron CG13300 - chr3L 6335516 intron CG13300 - chr3L_11_6335001 chr3L_6335001 RAL-392 1205 chr3L 6405642 6405688 chr3L 6432126 6432165 roo 13 26482 5.0 4.0 4.5 2.4 26523 chr3L 6405642 intron CG42747 + chr3L 6418904 intron CG42747 + chr3L 6432165 intron CG42747 + chr3L_13_6415001 chr3L_6415001 RAL-392 1206 chr3L 6540250 6540297 chr3L 6540356 6540373 11 101 1.5 5.0 3.2 2.6 123 chr3L 6540250 intron sfl + chr3L 6540312 intron sfl + chr3L 6540373 intron sfl + chr3L_11_6540001 chr3L_6540001 RAL-392 1207 chr3L 6555739 6555858 chr3L 6555839 6555950 15 96 0.0 0.0 0.0 15.0 211 chr3L 6555739 intron CG18769 + chr3L 6555844 intron CG18769 + chr3L 6555950 intron CG18769 + chr3L_15_6555001 chr3L_6555001 RAL-392 1208 chr3L 6562838 6562869 chr3L 6562928 6562969 12 98 5.5 13.0 9.2 1.2 131 chr3L 6562838 intron CG18769 + chr3L 6562904 intron CG18769 + chr3L 6562969 intron CG18769 + chr3L_12_6560001 chr3L_6560001 RAL-392 1209 chr3L 6570196 6570244 chr3L 6570662 6570710 27 462 3.5 4.0 3.8 5.6 514 chr3L 6570196 intron,intron CG18769 +,jv - chr3L 6570453 intron,intron CG18769 +,jv - chr3L 6570710 intron,intron CG18769 +,jv - chr3L_27_6570001 chr3L_6570001 RAL-392 1210 chr3L 6620592 6620613 chr3L 6621052 6621057 Rt1c 5 457 6.5 8.5 7.5 0.6 465 chr3L 6620592 intergenic not near genes chr3L 6620824 intergenic not near genes chr3L 6621057 intergenic not near genes chr3L_5_6620001 chr3L_6620001 RAL-392 1211 chr3L 6642866 6642875 chr3L 6642955 6642975 5 96 0.0 0.0 0.0 5.0 109 chr3L 6642866 intergenic CR45239 + chr3L 6642920 intergenic CR45239 + chr3L 6642975 intergenic CR45239 + chr3L_5_6640001 chr3L_6640001 RAL-392 1212 chr3L 6709345 6709375 chr3L 6709498 6709531 12 153 2.0 4.0 3.0 3.0 186 chr3L 6709345 intergenic CG8519 + chr3L 6709438 intergenic CG8519 + chr3L 6709531 intergenic not near genes chr3L_12_6705001 chr3L_6705001 RAL-392 1213 chr3L 6781103 6781115 chr3L 6783136 6783143 Doc 4 2032 10.5 6.0 8.2 0.4 2040 chr3L 6781103 intergenic not near genes chr3L 6782123 intergenic not near genes chr3L 6783143 intergenic not near genes chr3L_4_6780001 chr3L_6780001 RAL-392 1214 chr3L 6781131 6781148 chr3L 6783134 6783181 Doc 6 2028 3.0 6.0 4.5 1.1 2050 chr3L 6781131 intergenic not near genes chr3L 6782156 intergenic not near genes chr3L 6783181 intergenic not near genes chr3L_6_6780001 chr3L_6780001 RAL-392 1215 chr3L 6785583 6785616 chr3L 6785721 6785754 7 136 0.5 3.5 2.0 2.3 171 chr3L 6785583 intergenic not near genes chr3L 6785668 intergenic not near genes chr3L 6785754 intergenic not near genes chr3L_7_6785001 chr3L_6785001 RAL-392 1216 chr3L 6835910 6835924 chr3L 6836008 6836022 6 96 6.0 4.5 5.2 1.0 112 chr3L 6835910 intergenic not near genes chr3L 6835966 intergenic not near genes chr3L 6836022 intergenic not near genes chr3L_6_6835001 chr3L_6835001 RAL-392 1217 chr3L 6855924 6855946 chr3L 6860703 6860723 Doc 8 4784 5.0 2.0 3.5 1.8 4799 chr3L 6855924 intergenic not near genes chr3L 6858324 intergenic not near genes chr3L 6860723 intergenic not near genes chr3L_8_6855001 chr3L_6855001 RAL-392 1218 chr3L 6868699 6868742 chr3L 6868797 6868840 21 95 1.0 2.5 1.8 7.5 141 chr3L 6868699 intergenic not near genes chr3L 6868770 intergenic not near genes chr3L 6868840 intergenic not near genes chr3L_21_6865001 chr3L_6865001 RAL-392 1219 chr3L 6887511 6887548 chr3L 6895012 6895035 roo 14 7503 4.0 4.0 4.0 2.8 7524 chr3L 6887511 intergenic not near genes chr3L 6891273 intergenic not near genes chr3L 6895035 intergenic not near genes chr3L_14_6890001 chr3L_6890001 RAL-392 1220 chr3L 6934322 6934358 chr3L 6934447 6934478 12 127 3.5 2.0 2.8 3.2 156 chr3L 6934322 exon CG14820 + chr3L 6934400 intron CG14820 + chr3L 6934478 intron CG14820 + chr3L_12_6930001 chr3L_6930001 RAL-392 1221 chr3L 6958973 6959001 chr3L 6963564 6963583 9 4590 34.5 31.0 32.8 0.3 4610 chr3L 6958973 exon Surf1 + chr3L 6961278 exon sgl - chr3L 6963583 intron sgl - chr3L_9_6960001 chr3L_6960001 RAL-392 1222 chr3L 6974485 6974506 chr3L 6974606 6974626 4 116 1.0 6.0 3.5 0.9 141 chr3L 6974485 intron Galphai - chr3L 6974556 intron Galphai - chr3L 6974626 intron Galphai - chr3L_4_6970001 chr3L_6970001 RAL-392 1223 chr3L 6974507 6974520 chr3L 6974594 6974611 5 95 0.5 4.0 2.2 1.6 104 chr3L 6974507 intron Galphai - chr3L 6974559 intron Galphai - chr3L 6974611 intron Galphai - chr3L_5_6970001 chr3L_6970001 RAL-392 1224 chr3L 6994587 6994632 chr3L 6994687 6994692 6 88 6.0 0.5 3.2 1.4 105 chr3L 6994587 intergenic bin + chr3L 6994640 intergenic bin + chr3L 6994692 intergenic bin + chr3L_6_6990001 chr3L_6990001 RAL-392 1225 chr3L 6994891 6994913 chr3L 6995521 6995543 BS 5 630 0.0 2.0 1.0 2.5 652 chr3L 6994891 intergenic bin + chr3L 6995217 intergenic not near genes chr3L 6995543 intergenic not near genes chr3L_5_6995001 chr3L_6995001 RAL-392 1226 chr3L 7033172 7033203 chr3L 7033260 7033305 9 87 2.5 2.5 2.5 2.6 133 chr3L 7033172 intron Mp + chr3L 7033238 intron Mp + chr3L 7033305 intron Mp + chr3L_9_7030001 chr3L_7030001 RAL-392 1227 chr3L 7150876 7150901 chr3L 7150956 7150997 8 90 4.5 5.0 4.8 1.4 121 chr3L 7150876 intron corn - chr3L 7150936 intron corn - chr3L 7150997 intron corn - chr3L_8_7150001 chr3L_7150001 RAL-392 1228 chr3L 7175030 7175039 chr3L 7175268 7175288 5 245 5.5 7.0 6.2 0.7 258 chr3L 7175030 intron Dscam2 - chr3L 7175159 intron Dscam2 - chr3L 7175288 intron Dscam2 - chr3L_5_7175001 chr3L_7175001 RAL-392 1229 chr3L 7175042 7175059 chr3L 7175266 7175309 17 239 2.5 6.0 4.2 3.3 267 chr3L 7175042 intron Dscam2 - chr3L 7175176 intron Dscam2 - chr3L 7175309 intron Dscam2 - chr3L_17_7175001 chr3L_7175001 RAL-392 1230 chr3L 7202073 7202079 chr3L 7202233 7202239 4 160 2.5 3.0 2.8 1.1 166 chr3L 7202073 intergenic not near genes chr3L 7202156 intergenic not near genes chr3L 7202239 intergenic not near genes chr3L_4_7200001 chr3L_7200001 RAL-392 1231 chr3L 5894124 5894136 chr3L 7212055 7212056 4 1317924 5.5 18.0 11.8 0.3 1317932 chr3L 5894124 intergenic not near genes chr3L 6553090 intron CG18769 + chr3L 7212056 intergenic not near genes chr3L_4_6550001 chr3L_6550001 RAL-392 1232 chr3L 7278477 7278504 chr3L 7278573 7278595 5 94 7.5 4.0 5.8 0.7 118 chr3L 7278477 intron unc-13-4A - chr3L 7278536 intron unc-13-4A - chr3L 7278595 intron unc-13-4A - chr3L_5_7275001 chr3L_7275001 RAL-392 1233 chr3L 7309154 7309203 chr3L 7309379 7309426 15 216 1.5 6.5 4.0 3.0 272 chr3L 7309154 intron unc-13-4A - chr3L 7309290 intron unc-13-4A - chr3L 7309426 intron unc-13-4A - chr3L_15_7305001 chr3L_7305001 RAL-392 1234 chr3L 7377297 7377346 chr3L 7380422 7380446 297 14 3122 5.5 5.5 5.5 2.2 3149 chr3L 7377297 intron SMSr - chr3L 7378872 intron SMSr - chr3L 7380446 intron SMSr - chr3L_14_7375001 chr3L_7375001 RAL-392 1235 chr3L 7393115 7393128 chr3L 7393308 7393321 4 193 5.0 4.0 4.5 0.7 206 chr3L 7393115 intron CG8563 + chr3L 7393218 intron CG8563 + chr3L 7393321 intron CG8563 + chr3L_4_7390001 chr3L_7390001 RAL-392 1236 chr3L 7393129 7393160 chr3L 7393303 7393323 11 185 2.0 3.0 2.5 3.1 194 chr3L 7393129 intron CG8563 + chr3L 7393226 intron CG8563 + chr3L 7393323 intron CG8563 + chr3L_11_7390001 chr3L_7390001 RAL-392 1237 chr3L 7406775 7406782 chr3L 7406895 7406909 4 126 11.0 8.5 9.8 0.4 134 chr3L 7406775 intergenic pncr015:3L + chr3L 7406842 intergenic pncr015:3L + chr3L 7406909 intergenic pncr015:3L + chr3L_4_7405001 chr3L_7405001 RAL-392 1238 chr3L 7406789 7406809 chr3L 7406894 7406913 4 110 4.5 8.0 6.2 0.6 124 chr3L 7406789 intergenic pncr015:3L + chr3L 7406851 intergenic pncr015:3L + chr3L 7406913 intergenic pncr015:3L + chr3L_4_7405001 chr3L_7405001 RAL-392 1239 chr3L 7409854 7409867 chr3L 7410087 7410100 4 232 8.0 2.5 5.2 0.6 246 chr3L 7409854 intergenic CR44525 - chr3L 7409977 intergenic CR44525 - chr3L 7410100 intergenic CR44525 - chr3L_4_7405001 chr3L_7405001 RAL-392 1240 chr3L 7409871 7409897 chr3L 7410083 7410130 5 228 3.0 2.5 2.8 1.3 259 chr3L 7409871 intergenic CR44525 - chr3L 7410000 intergenic CR44525 - chr3L 7410130 intergenic CR44525 - chr3L_5_7405001 chr3L_7405001 RAL-392 1241 chr3L 7425991 7426031 chr3L 7426393 7426433 16 398 9.0 5.0 7.0 2.0 442 chr3L 7425991 intron CG42458 + chr3L 7426212 intron CG42458 + chr3L 7426433 intron CG42458 + chr3L_16_7425001 chr3L_7425001 RAL-392 1242 chr3L 7450683 7450718 chr3L 7450770 7450818 6 92 2.5 2.0 2.2 1.9 135 chr3L 7450683 intron CG42458 + chr3L 7450750 intron CG42458 + chr3L 7450818 intron CG42458 + chr3L_6_7450001 chr3L_7450001 RAL-392 1243 chr3L 7480033 7480068 chr3L 7480142 7480160 16 108 4.0 3.5 3.8 3.3 127 chr3L 7480033 intergenic not near genes chr3L 7480096 intergenic not near genes chr3L 7480160 intergenic not near genes chr3L_16_7480001 chr3L_7480001 RAL-392 1244 chr3L 7498743 7498783 chr3L 7503540 7503574 F-element 12 4796 7.5 8.0 7.8 1.4 4831 chr3L 7498743 5` UTR CG8539 - chr3L 7501158 intergenic not near genes chr3L 7503574 intergenic not near genes chr3L_12_7500001 chr3L_7500001 RAL-392 1245 chr3L 7505412 7505424 chr3L 7505508 7505520 4 96 2.5 8.5 5.5 0.6 108 chr3L 7505412 intergenic CG7548 - chr3L 7505466 intergenic CG7548 - chr3L 7505520 intergenic CG7548 - chr3L_4_7505001 chr3L_7505001 RAL-392 1246 chr3L 7524158 7524172 chr3L 7524260 7524289 10 113 4.0 5.0 4.5 1.8 131 chr3L 7524158 intron ltl + chr3L 7524224 intron ltl + chr3L 7524289 intron ltl + chr3L_10_7520001 chr3L_7520001 RAL-392 1247 chr3L 7572289 7572306 chr3L 7572367 7572394 8 91 2.5 1.5 2.0 2.7 105 chr3L 7572289 intergenic not near genes chr3L 7572342 intergenic not near genes chr3L 7572394 intergenic not near genes chr3L_8_7570001 chr3L_7570001 RAL-392 1248 chr3L 7591155 7591180 chr3L 7591246 7591271 5 84 3.5 6.5 5.0 0.8 116 chr3L 7591155 intergenic CG7716 - chr3L 7591213 intergenic CG7716 - chr3L 7591271 intergenic CG7716 - chr3L_5_7590001 chr3L_7590001 RAL-392 1249 chr3L 7711843 7711855 chr3L 7711904 7711907 6 70 1.5 7.0 4.2 1.2 64 chr3L 7711843 intron,intron CG32373 +,Ank2 - chr3L 7711875 intron,intron CG32373 +,Ank2 - chr3L 7711907 intron,intron CG32373 +,Ank2 - chr3L_6_7710001 chr3L_7710001 RAL-392 1250 chr3L 7760080 7760108 chr3L 7760166 7760183 10 86 1.5 2.0 1.8 3.6 103 chr3L 7760080 intergenic Hn + chr3L 7760132 intergenic Hn + chr3L 7760183 intergenic Hn + chr3L_10_7760001 chr3L_7760001 RAL-392 1251 chr3L 7793698 7793735 chr3L 7800770 7800792 297 22 7070 6.5 7.5 7.0 2.8 7094 chr3L 7793698 intron CG32369 - chr3L 7797245 intron CG32369 - chr3L 7800792 intron CG32369 - chr3L_22_7795001 chr3L_7795001 RAL-392 1252 chr3L 7860646 7860656 chr3L 7860752 7860755 5 106 11.0 4.5 7.8 0.6 109 chr3L 7860646 intron Pdp1 - chr3L 7860700 intron Pdp1 - chr3L 7860755 intron Pdp1 - chr3L_5_7860001 chr3L_7860001 RAL-392 1253 chr3L 7860661 7860687 chr3L 7860751 7860799 5 92 5.5 4.0 4.8 0.9 138 chr3L 7860661 intron Pdp1 - chr3L 7860730 intron Pdp1 - chr3L 7860799 intron Pdp1 - chr3L_5_7860001 chr3L_7860001 RAL-392 1254 chr3L 7886521 7886545 chr3L 7889044 7889082 Stalker4 6 2530 3.0 3.0 3.0 1.5 2561 chr3L 7886521 intron CG32365 + chr3L 7887802 intron CG32365 + chr3L 7889082 intron CG32365 + chr3L_6_7885001 chr3L_7885001 RAL-392 1255 chr3L 7916834 7916859 chr3L 7926000 7926028 roo 11 9183 4.5 5.0 4.8 1.9 9194 chr3L 7916834 3` UTR syd - chr3L 7921431 intron syd - chr3L 7926028 3` UTR syd - chr3L_11_7920001 chr3L_7920001 RAL-392 1256 chr3L 7985354 7985399 chr3L 7987692 7987711 NOF 10 2335 2.5 2.5 2.5 2.9 2357 chr3L 7985354 intron nmo + chr3L 7986532 intron nmo + chr3L 7987711 intron nmo + chr3L_10_7985001 chr3L_7985001 RAL-392 1257 chr3L 8014415 8014426 chr3L 8014509 8014523 9 99 11.0 11.5 11.2 0.7 108 chr3L 8014415 intron nmo + chr3L 8014469 intron nmo + chr3L 8014523 intron nmo + chr3L_9_8010001 chr3L_8010001 RAL-392 1258 chr3L 8014431 8014449 chr3L 8014497 8014551 7 96 5.5 9.0 7.2 0.9 120 chr3L 8014431 intron nmo + chr3L 8014491 intron nmo + chr3L 8014551 intron nmo + chr3L_7_8010001 chr3L_8010001 RAL-392 1259 chr3L 8058856 8058902 chr3L 8058959 8059005 11 96 1.5 3.5 2.5 3.1 149 chr3L 8058856 intergenic bip1 - chr3L 8058930 intergenic bip1 - chr3L 8059005 intergenic bip1 - chr3L_11_8055001 chr3L_8055001 RAL-392 1260 chr3L 8081261 8081306 chr3L 8081384 8081415 16 120 3.5 5.0 4.2 3.1 154 chr3L 8081261 intron Ect4 + chr3L 8081338 intron Ect4 + chr3L 8081415 intron Ect4 + chr3L_16_8080001 chr3L_8080001 RAL-392 1261 chr3L 8164585 8164623 chr3L 8165035 8165068 10 449 4.0 6.0 5.0 1.7 483 chr3L 8164585 intron CG13675 - chr3L 8164826 intron CG13675 - chr3L 8165068 intron CG13675 - chr3L_10_8160001 chr3L_8160001 RAL-392 1262 chr3L 8165971 8165994 chr3L 8166053 8166093 7 100 1.5 2.5 2.0 2.3 122 chr3L 8165971 intergenic CG13675 - chr3L 8166032 intergenic not near genes chr3L 8166093 intergenic not near genes chr3L_7_8165001 chr3L_8165001 RAL-392 1263 chr3L 8178507 8178519 chr3L 8178604 8178616 4 95 3.5 0.0 1.8 1.4 109 chr3L 8178507 intergenic Nmt -,mthl7 - chr3L 8178562 intergenic mthl7 -,Nmt - chr3L 8178616 intergenic mthl7 -,Nmt - chr3L_4_8175001 chr3L_8175001 RAL-392 1264 chr3L 8210791 8210833 chr3L 8210916 8210922 4 118 2.0 7.5 4.8 0.7 131 chr3L 8210791 intergenic CG32364 - chr3L 8210856 intergenic CG32364 - chr3L 8210922 intergenic CG32364 - chr3L_4_8210001 chr3L_8210001 RAL-392 1265 chr3L 8216847 8216888 chr3L 8216934 8216962 9 87 4.5 5.5 5.0 1.5 115 chr3L 8216847 intergenic not near genes chr3L 8216904 intergenic not near genes chr3L 8216962 intergenic not near genes chr3L_9_8215001 chr3L_8215001 RAL-392 1266 chr3L 8233573 8233590 chr3L 8238854 8238867 Rt1a 4 5279 2.5 8.5 5.5 0.6 5294 chr3L 8233573 intron CG7213 - chr3L 8236220 intron CG7213 - chr3L 8238867 intron,intron CG7213 -,Dscam4 + chr3L_4_8235001 chr3L_8235001 RAL-392 1267 chr3L 8295782 8295817 chr3L 8295955 8295959 16 174 6.0 3.5 4.8 2.8 177 chr3L 8295782 intergenic CG7201 - chr3L 8295870 intergenic not near genes chr3L 8295959 intergenic not near genes chr3L_16_8295001 chr3L_8295001 RAL-392 1268 chr3L 8443549 8443578 chr3L 8443650 8443680 4 94 5.5 7.5 6.5 0.5 131 chr3L 8443549 3` UTR CG6983 - chr3L 8443614 3` UTR CG6983 - chr3L 8443680 3` UTR CG6983 - chr3L_4_8440001 chr3L_8440001 RAL-392 1269 chr3L 8451365 8451414 chr3L 8451472 8451512 12 105 0.0 11.5 5.8 1.8 147 chr3L 8451365 intron Gug + chr3L 8451438 intron Gug + chr3L 8451512 intron Gug + chr3L_12_8450001 chr3L_8450001 RAL-392 1270 chr3L 8491630 8491641 chr3L 8491732 8491738 5 101 9.5 6.0 7.8 0.6 108 chr3L 8491630 intron CG43163 - chr3L 8491684 intron CG43163 - chr3L 8491738 intron CG43163 - chr3L_5_8490001 chr3L_8490001 RAL-392 1271 chr3L 8491646 8491678 chr3L 8491728 8491780 10 94 3.0 5.0 4.0 2.0 134 chr3L 8491646 intron CG43163 - chr3L 8491713 intron CG43163 - chr3L 8491780 intron CG43163 - chr3L_10_8490001 chr3L_8490001 RAL-392 1272 chr3L 8498304 8498326 chr3L 8505766 8505813 blood 7 7483 0.5 11.5 6.0 1.0 7509 chr3L 8498304 intron CG43163 - chr3L 8502058 intron CG43163 - chr3L 8505813 intron CG43163 - chr3L_7_8500001 chr3L_8500001 RAL-392 1273 chr3L 8576256 8576280 chr3L 8576369 8576378 4 107 2.5 2.0 2.2 1.2 122 chr3L 8576256 intergenic CG6638 - chr3L 8576317 intergenic CG6638 -,CG43078 + chr3L 8576378 intergenic CG6638 -,CG43078 + chr3L_4_8575001 chr3L_8575001 RAL-392 1274 chr3L 8823446 8823479 chr3L 8823548 8823581 7 101 6.5 4.0 5.2 1.1 135 chr3L 8823446 intergenic not near genes chr3L 8823514 intergenic not near genes chr3L 8823581 intergenic not near genes chr3L_7_8820001 chr3L_8820001 RAL-392 1275 chr3L 8861516 8861533 chr3L 8861627 8861644 5 110 4.5 2.0 3.2 1.2 128 chr3L 8861516 intron dally + chr3L 8861580 intron dally + chr3L 8861644 intron dally + chr3L_5_8860001 chr3L_8860001 RAL-392 1276 chr3L 8861535 8861553 chr3L 8861624 8861664 12 100 1.0 2.0 1.5 4.8 129 chr3L 8861535 intron dally + chr3L 8861600 intron dally + chr3L 8861664 intron dally + chr3L_12_8860001 chr3L_8860001 RAL-392 1277 chr3L 8950559 8950567 chr3L 8950654 8950681 4 109 5.5 5.0 5.2 0.6 122 chr3L 8950559 intron,intron CG43783 -,orb2 - chr3L 8950620 intron,intron CG43783 -,orb2 - chr3L 8950681 intron,intron CG43783 -,orb2 - chr3L_4_8950001 chr3L_8950001 RAL-392 1278 chr3L 8950568 8950581 chr3L 8950647 8950694 7 105 4.0 5.0 4.5 1.3 126 chr3L 8950568 intron,intron CG43783 -,orb2 - chr3L 8950631 intron,intron CG43783 -,orb2 - chr3L 8950694 intron,intron CG43783 -,orb2 - chr3L_7_8950001 chr3L_8950001 RAL-392 1279 chr3L 9003940 9003977 chr3L 9004034 9004059 15 94 0.5 4.5 2.5 4.3 119 chr3L 9003940 intergenic not near genes chr3L 9004000 intergenic not near genes chr3L 9004059 intergenic not near genes chr3L_15_9000001 chr3L_9000001 RAL-392 1280 chr3L 9047076 9047088 chr3L 9047178 9047195 4 106 2.0 0.0 1.0 2.0 119 chr3L 9047076 intergenic CG5144 + chr3L 9047136 intergenic CG5144 + chr3L 9047195 intergenic CG5144 + chr3L_4_9045001 chr3L_9045001 RAL-392 1281 chr3L 9056598 9056629 chr3L 9056687 9056716 4 88 1.5 2.0 1.8 1.4 118 chr3L 9056598 intron Argk - chr3L 9056657 intron Argk - chr3L 9056716 intron Argk - chr3L_4_9055001 chr3L_9055001 RAL-392 1282 chr3L 9076915 9076950 chr3L 9084490 9084497 412 8 7573 9.0 6.5 7.8 0.9 7582 chr3L 9076915 exon Tequila + chr3L 9080706 intron Tequila + chr3L 9084497 exon Tequila + chr3L_8_9080001 chr3L_9080001 RAL-392 1283 chr3L 9130546 9130575 chr3L 9134317 9134349 412 4 3776 7.0 4.0 5.5 0.6 3803 chr3L 9130546 intergenic bol - chr3L 9132448 intergenic not near genes chr3L 9134349 intergenic Dhpr + chr3L_4_9130001 chr3L_9130001 RAL-392 1284 chr3L 9164701 9164725 chr3L 9166169 9166186 hobo 9 1478 2.0 1.0 1.5 3.6 1485 chr3L 9164701 intron Rdl - chr3L 9165444 intron Rdl - chr3L 9166186 intron Rdl - chr3L_9_9165001 chr3L_9165001 RAL-392 1285 chr3L 9219225 9219280 chr3L 9219917 9219928 jockey 10 670 4.0 5.5 4.8 1.7 703 chr3L 9219225 intergenic not near genes chr3L 9219576 intergenic not near genes chr3L 9219928 intergenic not near genes chr3L_10_9215001 chr3L_9215001 RAL-392 1286 chr3L 9270614 9270634 chr3L 9278378 9278386 roo 5 7767 6.0 4.5 5.2 0.8 7772 chr3L 9270614 intron GluRIB + chr3L 9274500 intron GluRIB + chr3L 9278386 exon GluRIB + chr3L_5_9270001 chr3L_9270001 RAL-392 1287 chr3L 9270637 9270644 chr3L 9278371 9278413 roo 4 7746 4.0 3.5 3.8 0.8 7776 chr3L 9270637 intron GluRIB + chr3L 9274525 intron GluRIB + chr3L 9278413 exon GluRIB + chr3L_4_9270001 chr3L_9270001 RAL-392 1288 chr3L 9307796 9307796 chr3L 22908066 22908066 4 13600270 29.0 37.5 33.2 0.1 13600270 chr3L 9307796 intergenic not near genes chr3L 16107931 intron Zn72D - chr3L 22908066 intergenic not near genes chr3L_4_16105001 chr3L_16105001 RAL-392 1289 chr3L 9359569 9359614 chr3L 9359680 9359725 8 110 12.0 9.0 10.5 0.7 156 chr3L 9359569 3` UTR CG32039 + chr3L 9359647 3` UTR CG32039 + chr3L 9359725 3` UTR CG32039 + chr3L_8_9355001 chr3L_9355001 RAL-392 1290 chr3L 9443495 9443544 chr3L 9445300 9445335 S-element 12 1802 4.0 5.0 4.5 2.2 1840 chr3L 9443495 intron CG33926 + chr3L 9444415 intron CG33926 + chr3L 9445335 intron CG33926 + chr3L_12_9440001 chr3L_9440001 RAL-392 1291 chr3L 9501707 9501733 chr3L 9502213 9502233 roo 8 505 2.5 12.0 7.2 1.0 526 chr3L 9501707 intron path - chr3L 9501970 intron path - chr3L 9502233 intron path - chr3L_8_9500001 chr3L_9500001 RAL-392 1292 chr3L 9571893 9571940 chr3L 9572261 9572307 jockey 16 366 2.0 6.0 4.0 3.2 414 chr3L 9571893 intron CG42673 + chr3L 9572100 intron CG42673 + chr3L 9572307 intron CG42673 + chr3L_16_9570001 chr3L_9570001 RAL-392 1293 chr3L 9572277 9572336 chr3L 9572376 9572416 6 96 5.5 5.0 5.2 1.0 139 chr3L 9572277 intron CG42673 + chr3L 9572346 intron CG42673 + chr3L 9572416 intron CG42673 + chr3L_6_9570001 chr3L_9570001 RAL-392 1294 chr3L 9575905 9575939 chr3L 9580986 9581003 jockey 7 5080 4.0 1.0 2.5 2.0 5098 chr3L 9575905 intron CG42673 + chr3L 9578454 intron CG42673 + chr3L 9581003 intron CG42673 + chr3L_7_9575001 chr3L_9575001 RAL-392 1295 chr3L 9637842 9637886 chr3L 9637934 9637988 22 96 4.0 5.0 4.5 4.0 146 chr3L 9637842 intron fry - chr3L 9637915 intron fry - chr3L 9637988 intron fry - chr3L_22_9635001 chr3L_9635001 RAL-392 1296 chr3L 9639008 9639055 chr3L 9639113 9639143 11 101 0.0 6.5 3.2 2.6 135 chr3L 9639008 intron,3` UTR fry -,CG8329 + chr3L 9639076 intron fry - chr3L 9639143 intron fry - chr3L_11_9635001 chr3L_9635001 RAL-392 1297 chr3L 9715584 9715625 chr3L 9715673 9715722 5 93 4.5 6.0 5.2 0.8 138 chr3L 9715584 intron vsg + chr3L 9715653 intron vsg + chr3L 9715722 intron vsg + chr3L_5_9715001 chr3L_9715001 RAL-392 1298 chr3L 9907128 9907179 chr3L 9907249 9907273 12 117 10.5 10.5 10.5 1.0 145 chr3L 9907128 intergenic not near genes chr3L 9907200 intergenic not near genes chr3L 9907273 intergenic not near genes chr3L_12_9905001 chr3L_9905001 RAL-392 1299 chr3L 9929675 9929700 chr3L 9938456 9938459 roo 9 8789 1.0 3.5 2.2 2.8 8784 chr3L 9929675 intron CG34356 + chr3L 9934067 intron CG34356 + chr3L 9938459 intron CG34356 + chr3L_9_9930001 chr3L_9930001 RAL-392 1300 chr3L 10003136 10003173 chr3L 10003253 10003269 14 115 6.0 3.0 4.5 2.5 133 chr3L 10003136 intron dpr6 + chr3L 10003202 intron dpr6 + chr3L 10003269 intron dpr6 + chr3L_14_10000001 chr3L_10000001 RAL-392 1301 chr3L 10007174 10007200 chr3L 10007292 10007323 18 120 2.0 5.0 3.5 4.0 149 chr3L 10007174 intron dpr6 + chr3L 10007248 intron dpr6 + chr3L 10007323 intron dpr6 + chr3L_18_10005001 chr3L_10005001 RAL-392 1302 chr3L 10165641 10165652 chr3L 10165737 10165747 6 96 8.0 1.0 4.5 1.1 106 chr3L 10165641 intron dpr10 - chr3L 10165694 intron dpr10 - chr3L 10165747 intron dpr10 - chr3L_6_10165001 chr3L_10165001 RAL-392 1303 chr3L 10191267 10191316 chr3L 10191398 10191447 25 125 4.0 6.5 5.2 4.0 180 chr3L 10191267 exon ect - chr3L 10191357 intron ect - chr3L 10191447 intron ect - chr3L_25_10190001 chr3L_10190001 RAL-392 1304 chr3L 10247680 10247688 chr3L 10247779 10247787 5 99 12.0 3.5 7.8 0.6 107 chr3L 10247680 5` UTR CR44539 + chr3L 10247734 5` UTR CR44539 + chr3L 10247787 intergenic CR44539 +,CR44540 - chr3L_5_10245001 chr3L_10245001 RAL-392 1305 chr3L 10297098 10297154 chr3L 10297225 10297229 23 117 3.0 4.0 3.5 5.1 131 chr3L 10297098 intergenic not near genes chr3L 10297164 intergenic not near genes chr3L 10297229 intergenic not near genes chr3L_23_10295001 chr3L_10295001 RAL-392 1306 chr3L 10348637 10348670 chr3L 10348774 10348807 14 135 7.0 0.5 3.8 2.9 170 chr3L 10348637 intron CR44327 + chr3L 10348722 intron CR44327 + chr3L 10348807 intron CR44327 + chr3L_14_10345001 chr3L_10345001 RAL-392 1307 chr3L 10381319 10381354 chr3L 10381404 10381453 8 92 1.0 0.5 0.8 4.4 134 chr3L 10381319 intergenic not near genes chr3L 10381386 intergenic not near genes chr3L 10381453 intergenic not near genes chr3L_8_10380001 chr3L_10380001 RAL-392 1308 chr3L 10393174 10393193 chr3L 10393264 10393293 6 97 1.0 7.0 4.0 1.2 119 chr3L 10393174 intergenic not near genes chr3L 10393234 intergenic not near genes chr3L 10393293 intergenic not near genes chr3L_6_10390001 chr3L_10390001 RAL-392 1309 chr3L 10414934 10414975 chr3L 10417313 10417335 Doc 19 2368 6.0 3.0 4.5 3.5 2401 chr3L 10414934 intergenic CG12362 + chr3L 10416134 intergenic not near genes chr3L 10417335 intergenic not near genes chr3L_19_10415001 chr3L_10415001 RAL-392 1310 chr3L 10420460 10420475 chr3L 10420612 10420627 6 152 7.0 0.0 3.5 1.3 167 chr3L 10420460 intergenic not near genes chr3L 10420544 intergenic not near genes chr3L 10420627 intergenic not near genes chr3L_6_10420001 chr3L_10420001 RAL-392 1311 chr3L 10538672 10538725 chr3L 10538771 10538824 17 89 3.5 3.5 3.5 3.8 152 chr3L 10538672 intron A2bp1 + chr3L 10538748 intron A2bp1 + chr3L 10538824 intron A2bp1 + chr3L_17_10535001 chr3L_10535001 RAL-392 1312 chr3L 10551450 10551491 chr3L 10551550 10551598 15 101 1.5 4.5 3.0 3.8 148 chr3L 10551450 intron A2bp1 + chr3L 10551524 intron A2bp1 + chr3L 10551598 intron A2bp1 + chr3L_15_10550001 chr3L_10550001 RAL-392 1313 chr3L 10584265 10584277 chr3L 10584372 10584384 5 107 13.5 6.5 10.0 0.5 119 chr3L 10584265 intron A2bp1 + chr3L 10584324 intron A2bp1 + chr3L 10584384 intron A2bp1 + chr3L_5_10580001 chr3L_10580001 RAL-392 1314 chr3L 10584285 10584301 chr3L 10584367 10584408 12 104 6.5 4.5 5.5 1.8 123 chr3L 10584285 intron A2bp1 + chr3L 10584346 intron A2bp1 + chr3L 10584408 intron A2bp1 + chr3L_12_10580001 chr3L_10580001 RAL-392 1315 chr3L 10600441 10600455 chr3L 10600543 10600549 5 99 6.0 2.0 4.0 1.0 108 chr3L 10600441 intergenic not near genes chr3L 10600495 intergenic not near genes chr3L 10600549 intergenic not near genes chr3L_5_10600001 chr3L_10600001 RAL-392 1316 chr3L 10600463 10600475 chr3L 10600537 10600577 7 97 3.0 1.5 2.2 2.2 114 chr3L 10600463 intergenic not near genes chr3L 10600520 intergenic not near genes chr3L 10600577 intergenic not near genes chr3L_7_10600001 chr3L_10600001 RAL-392 1317 chr3L 10614783 10614797 chr3L 10614882 10614896 7 98 0.0 10.5 5.2 1.1 113 chr3L 10614783 intergenic not near genes chr3L 10614840 intergenic not near genes chr3L 10614896 intergenic not near genes chr3L_7_10610001 chr3L_10610001 RAL-392 1318 chr3L 10621826 10621878 chr3L 10621933 10621985 6 106 2.0 2.5 2.2 1.9 159 chr3L 10621826 intergenic not near genes chr3L 10621906 intergenic not near genes chr3L 10621985 intergenic not near genes chr3L_6_10620001 chr3L_10620001 RAL-392 1319 chr3L 10658063 10658208 chr3L 10658160 10658347 27 126 0.5 0.5 0.5 18.0 284 chr3L 10658063 intron CG32066 - chr3L 10658205 intron CG32066 - chr3L 10658347 intron CG32066 - chr3L_27_10655001 chr3L_10655001 RAL-392 1320 chr3L 10694899 10694932 chr3L 10695011 10695044 9 112 4.5 3.0 3.8 1.9 145 chr3L 10694899 intron NijA - chr3L 10694972 intron NijA - chr3L 10695044 exon NijA - chr3L_9_10690001 chr3L_10690001 RAL-392 1321 chr3L 10706539 10706545 chr3L 10706699 10706705 4 160 0.0 2.0 1.0 2.0 166 chr3L 10706539 intergenic not near genes chr3L 10706622 intergenic not near genes chr3L 10706705 intergenic not near genes chr3L_4_10705001 chr3L_10705001 RAL-392 1322 chr3L 10721980 10722005 chr3L 10722082 10722100 6 101 7.0 0.0 3.5 1.3 120 chr3L 10721980 intergenic not near genes chr3L 10722040 intergenic not near genes chr3L 10722100 intergenic not near genes chr3L_6_10720001 chr3L_10720001 RAL-392 1323 chr3L 10735826 10735927 chr3L 10735920 10736039 7 109 2.0 1.0 1.5 2.8 213 chr3L 10735826 intergenic not near genes chr3L 10735932 intergenic not near genes chr3L 10736039 intergenic not near genes chr3L_7_10735001 chr3L_10735001 RAL-392 1324 chr3L 10745520 10745568 chr3L 10745620 10745668 24 94 9.0 9.5 9.2 2.4 148 chr3L 10745520 intergenic not near genes chr3L 10745594 intergenic not near genes chr3L 10745668 intergenic not near genes chr3L_24_10745001 chr3L_10745001 RAL-392 1325 chr3L 10748719 10748764 chr3L 10748831 10748861 14 108 8.0 4.0 6.0 2.0 142 chr3L 10748719 intergenic not near genes chr3L 10748790 intergenic not near genes chr3L 10748861 intergenic not near genes chr3L_14_10745001 chr3L_10745001 RAL-392 1326 chr3L 10956430 10956468 chr3L 10956568 10956606 6 133 2.5 4.0 3.2 1.4 176 chr3L 10956430 intergenic not near genes chr3L 10956518 intergenic not near genes chr3L 10956606 intergenic not near genes chr3L_6_10955001 chr3L_10955001 RAL-392 1327 chr3L 10956987 10957034 chr3L 10957083 10957125 6 95 2.0 5.0 3.5 1.3 138 chr3L 10956987 intergenic not near genes chr3L 10957056 intergenic not near genes chr3L 10957125 intergenic not near genes chr3L_6_10955001 chr3L_10955001 RAL-392 1328 chr3L 11127193 11127289 chr3L 11127290 11127360 5 92 2.5 1.0 1.8 1.8 167 chr3L 11127193 intron CG42575 + chr3L 11127276 intron CG42575 + chr3L 11127360 intron CG42575 + chr3L_5_11125001 chr3L_11125001 RAL-392 1329 chr3L 11131796 11131807 chr3L 11132075 11132076 5 280 10.5 2.0 6.2 0.7 280 chr3L 11131796 intron CG42575 + chr3L 11131936 intron,3` UTR CG42575 +,CG32074 - chr3L 11132076 intron,exon CG42575 +,CG32074 - chr3L_5_11130001 chr3L_11130001 RAL-392 1330 chr3L 11135521 11135803 chr3L 11135768 11135908 13 155 1.5 3.0 2.2 4.1 387 chr3L 11135521 intergenic CG14143 + chr3L 11135714 intergenic CG14143 +,CG32082 + chr3L 11135908 intergenic CG32082 +,CG14143 + chr3L_13_11135001 chr3L_11135001 RAL-392 1331 chr3L 11141443 11141466 chr3L 11141556 11141581 10 111 3.0 4.0 3.5 2.2 138 chr3L 11141443 intron CG32082 + chr3L 11141512 intron CG32082 + chr3L 11141581 intron CG32082 + chr3L_10_11140001 chr3L_11140001 RAL-392 1332 chr3L 11158361 11158530 chr3L 11158508 11158642 4 133 30.0 32.0 31.0 0.1 281 chr3L 11158361 exon CG32082 + chr3L 11158502 intron CG32082 + chr3L 11158642 exon CG32082 + chr3L_4_11155001 chr3L_11155001 RAL-392 1333 chr3L 11158919 11158960 chr3L 11159295 11159298 4 360 20.0 17.0 18.5 0.2 379 chr3L 11158919 exon CG32082 + chr3L 11159108 intron CG32082 + chr3L 11159298 exon CG32082 + chr3L_4_11155001 chr3L_11155001 RAL-392 1334 chr3L 11224526 11224576 chr3L 11224668 11224712 9 141 7.0 1.5 4.2 1.7 186 chr3L 11224526 intron CG42671 + chr3L 11224619 intron CG42671 + chr3L 11224712 intron CG42671 + chr3L_9_11220001 chr3L_11220001 RAL-392 1335 chr3L 11229999 11230020 chr3L 11230079 11230137 5 100 7.5 5.0 6.2 0.7 138 chr3L 11229999 intergenic CG42671 + chr3L 11230068 intergenic CG42671 + chr3L 11230137 intergenic not near genes chr3L_5_11230001 chr3L_11230001 RAL-392 1336 chr3L 11241770 11241786 chr3L 11241872 11241888 4 102 13.5 13.0 13.2 0.3 118 chr3L 11241770 intergenic not near genes chr3L 11241829 intergenic not near genes chr3L 11241888 intergenic not near genes chr3L_4_11240001 chr3L_11240001 RAL-392 1337 chr3L 11249839 11249890 chr3L 11249942 11249958 12 89 4.0 6.0 5.0 2.0 119 chr3L 11249839 5` UTR CR44717 + chr3L 11249898 5` UTR CR44717 + chr3L 11249958 5` UTR CR44717 + chr3L_12_11245001 chr3L_11245001 RAL-392 1338 chr3L 11264455 11264489 chr3L 11271427 11271461 17.6 13 6970 2.5 2.0 2.2 4.1 7006 chr3L 11264455 intergenic not near genes chr3L 11267958 intergenic not near genes chr3L 11271461 intergenic not near genes chr3L_13_11265001 chr3L_11265001 RAL-392 1339 chr3L 11276659 11276695 chr3L 11276749 11276795 10 92 3.0 8.5 5.8 1.5 136 chr3L 11276659 intergenic not near genes chr3L 11276727 intergenic not near genes chr3L 11276795 intergenic not near genes chr3L_10_11275001 chr3L_11275001 RAL-392 1340 chr3L 11315902 11316010 chr3L 11315999 11316115 5 99 2.5 2.0 2.2 1.6 213 chr3L 11315902 5` UTR CR44361 + chr3L 11316008 5` UTR CR44361 + chr3L 11316115 5` UTR CR44361 + chr3L_5_11315001 chr3L_11315001 RAL-392 1341 chr3L 11435545 11435585 chr3L 11435731 11435743 10 178 6.0 5.0 5.5 1.5 198 chr3L 11435545 intergenic CG6149 -,CR44548 + chr3L 11435644 intergenic CR44548 +,CG6149 - chr3L 11435743 5` UTR CR44548 + chr3L_10_11435001 chr3L_11435001 RAL-392 1342 chr3L 11579549 11579585 chr3L 11579674 11579706 7 124 8.5 10.5 9.5 0.7 157 chr3L 11579549 intergenic CG43390 - chr3L 11579628 intergenic CG43390 - chr3L 11579706 intergenic CG43390 - chr3L_7_11575001 chr3L_11575001 RAL-392 1343 chr3L 11587900 11587953 chr3L 11587996 11588049 8 92 10.0 10.0 10.0 0.7 149 chr3L 11587900 intergenic rt - chr3L 11587974 intergenic rt - chr3L 11588049 intergenic rt - chr3L_8_11585001 chr3L_11585001 RAL-392 1344 chr3L 11588727 11588752 chr3L 11588891 11588903 13 164 6.0 8.0 7.0 1.6 176 chr3L 11588727 intergenic not near genes chr3L 11588815 intergenic not near genes chr3L 11588903 intergenic not near genes chr3L_13_11585001 chr3L_11585001 RAL-392 1345 chr3L 11663751 11663753 chr3L 11663896 11663898 4 145 4.5 3.0 3.8 0.8 147 chr3L 11663751 intron CG32085 - chr3L 11663824 intron CG32085 - chr3L 11663898 intron CG32085 - chr3L_4_11660001 chr3L_11660001 RAL-392 1346 chr3L 11673961 11673991 chr3L 11674057 11674074 5 86 18.5 19.0 18.8 0.3 113 chr3L 11673961 intron CG32085 - chr3L 11674018 intron CG32085 - chr3L 11674074 intron CG32085 - chr3L_5_11670001 chr3L_11670001 RAL-392 1347 chr3L 11678079 11678125 chr3L 11678186 11678220 16 106 1.0 2.0 1.5 6.4 141 chr3L 11678079 intron CG32085 - chr3L 11678150 intron CG32085 - chr3L 11678220 intron CG32085 - chr3L_16_11675001 chr3L_11675001 RAL-392 1348 chr3L 11723069 11723116 chr3L 11727884 11727930 Doc 20 4814 3.0 6.0 4.5 3.6 4861 chr3L 11723069 3` UTR Bmcp + chr3L 11725500 intron Bmcp + chr3L 11727930 3` UTR Bmcp + chr3L_20_11725001 chr3L_11725001 RAL-392 1349 chr3L 11744000 11744045 chr3L 11744128 11744138 6 115 8.5 4.0 6.2 0.8 138 chr3L 11744000 exon CG6024 - chr3L 11744069 intron CG6024 - chr3L 11744138 intron CG6024 - chr3L_6_11740001 chr3L_11740001 RAL-392 1350 chr3L 11757899 11757936 chr3L 11758015 11758042 6 110 4.0 0.0 2.0 2.0 143 chr3L 11757899 intron CG6024 - chr3L 11757970 intron CG6024 - chr3L 11758042 intron CG6024 - chr3L_6_11755001 chr3L_11755001 RAL-392 1351 chr3L 11847121 11847166 chr3L 11847231 11847276 7 110 2.0 0.0 1.0 3.5 155 chr3L 11847121 intergenic CG12521 - chr3L 11847198 intergenic CG12521 - chr3L 11847276 intergenic CG12521 - chr3L_7_11845001 chr3L_11845001 RAL-392 1352 chr3L 11849332 11849353 chr3L 11849432 11849462 4 110 7.0 6.5 6.8 0.5 130 chr3L 11849332 intergenic not near genes chr3L 11849397 intergenic not near genes chr3L 11849462 intergenic not near genes chr3L_4_11845001 chr3L_11845001 RAL-392 1353 chr3L 11887239 11887269 chr3L 11887356 11887371 11 110 9.0 4.0 6.5 1.5 132 chr3L 11887239 intron CG44837 - chr3L 11887305 intron,3` UTR CG44837 -,CG5897 - chr3L 11887371 intron,3` UTR CG44837 -,CG5897 - chr3L_11_11885001 chr3L_11885001 RAL-392 1354 chr3L 11902086 11902112 chr3L 11902412 11902414 4 309 40.5 35.5 38.0 0.1 328 chr3L 11902086 intron CG44837 - chr3L 11902250 intron CG44837 - chr3L 11902414 intron CG44837 - chr3L_4_11900001 chr3L_11900001 RAL-392 1355 chr3L 11943473 11943520 chr3L 11943594 11943618 11 114 4.5 5.5 5.0 1.8 145 chr3L 11943473 3` UTR Rpt4R + chr3L 11943546 intergenic Rpt4R +,CG5883 - chr3L 11943618 intergenic CG5883 -,Rpt4R + chr3L_11_11940001 chr3L_11940001 RAL-392 1356 chr3L 12013891 12013937 chr3L 12014002 12014048 21 106 1.5 1.0 1.2 9.5 157 chr3L 12013891 intron rols - chr3L 12013970 intron rols - chr3L 12014048 intron rols - chr3L_21_12010001 chr3L_12010001 RAL-392 1357 chr3L 12034878 12034920 chr3L 12034970 12034976 18 90 7.0 7.5 7.2 2.2 98 chr3L 12034878 intron rols - chr3L 12034927 intron rols - chr3L 12034976 intron rols - chr3L_18_12030001 chr3L_12030001 RAL-392 1358 chr3L 12052694 12052737 chr3L 12052793 12052832 20 106 5.5 4.0 4.8 3.4 138 chr3L 12052694 intron rols - chr3L 12052763 intron rols - chr3L 12052832 intron rols - chr3L_20_12050001 chr3L_12050001 RAL-392 1359 chr3L 12170776 12170824 chr3L 12170873 12170900 5 92 31.5 26.5 29.0 0.2 124 chr3L 12170776 intron Rh7 - chr3L 12170838 intron Rh7 - chr3L 12170900 intron Rh7 - chr3L_5_12170001 chr3L_12170001 RAL-392 1360 chr3L 12197390 12197417 chr3L 12197482 12197494 8 88 3.5 2.5 3.0 2.0 104 chr3L 12197390 intergenic CG11529 + chr3L 12197442 intergenic CG11529 + chr3L 12197494 intergenic CG11529 + chr3L_8_12195001 chr3L_12195001 RAL-392 1361 chr3L 12369515 12369565 chr3L 12369625 12369675 20 108 3.5 3.0 3.2 4.8 160 chr3L 12369515 intron Ncc69 - chr3L 12369595 intron Ncc69 - chr3L 12369675 intron Ncc69 - chr3L_20_12365001 chr3L_12365001 RAL-392 1362 chr3L 12578049 12578077 chr3L 12578146 12578185 7 106 1.0 0.0 0.5 4.7 136 chr3L 12578049 intergenic not near genes chr3L 12578117 intergenic not near genes chr3L 12578185 intergenic not near genes chr3L_7_12575001 chr3L_12575001 RAL-392 1363 chr3L 12610975 12611025 chr3L 12611241 12611291 24 264 2.5 4.0 3.2 5.7 316 chr3L 12610975 intron caup + chr3L 12611133 intron caup + chr3L 12611291 intron caup + chr3L_24_12610001 chr3L_12610001 RAL-392 1364 chr3L 12614579 12614598 chr3L 12614737 12614756 8 158 0.0 6.0 3.0 2.0 177 chr3L 12614579 intron caup + chr3L 12614668 intron caup + chr3L 12614756 intron caup + chr3L_8_12610001 chr3L_12610001 RAL-392 1365 chr3L 12626132 12626158 chr3L 12626261 12626287 8 128 2.5 1.5 2.0 2.7 155 chr3L 12626132 intergenic not near genes chr3L 12626210 intergenic not near genes chr3L 12626287 intergenic not near genes chr3L_8_12625001 chr3L_12625001 RAL-392 1366 chr3L 12647951 12647975 chr3L 12648027 12648064 9 91 4.5 2.5 3.5 2.0 113 chr3L 12647951 5` UTR CR32111 + chr3L 12648008 5` UTR CR32111 + chr3L 12648064 5` UTR CR32111 + chr3L_9_12645001 chr3L_12645001 RAL-392 1367 chr3L 12659754 12659770 chr3L 12659843 12659866 4 88 6.5 0.5 3.5 0.9 112 chr3L 12659754 5` UTR CR44553 + chr3L 12659810 5` UTR CR44553 + chr3L 12659866 5` UTR CR44553 + chr3L_4_12655001 chr3L_12655001 RAL-392 1368 chr3L 12668048 12668075 chr3L 12668154 12668181 6 102 7.5 2.0 4.8 1.0 133 chr3L 12668048 intergenic not near genes chr3L 12668114 intergenic not near genes chr3L 12668181 intergenic not near genes chr3L_6_12665001 chr3L_12665001 RAL-392 1369 chr3L 12706629 12706654 chr3L 12706769 12706801 16 143 2.5 5.0 3.8 3.3 172 chr3L 12706629 intron mirr + chr3L 12706715 intron mirr + chr3L 12706801 intron mirr + chr3L_16_12705001 chr3L_12705001 RAL-392 1370 chr3L 12728041 12728044 chr3L 12728134 12728148 4 101 3.0 13.5 8.2 0.4 107 chr3L 12728041 intergenic not near genes chr3L 12728094 intergenic not near genes chr3L 12728148 intergenic not near genes chr3L_4_12725001 chr3L_12725001 RAL-392 1371 chr3L 12799829 12799836 chr3L 12799945 12799964 4 123 9.5 11.0 10.2 0.4 135 chr3L 12799829 intron Atg1 - chr3L 12799896 intron Atg1 - chr3L 12799964 intron Atg1 - chr3L_4_12795001 chr3L_12795001 RAL-392 1372 chr3L 12821135 12821176 chr3L 12821238 12821272 8 103 9.5 9.0 9.2 0.8 137 chr3L 12821135 exon CG42588 + chr3L 12821204 exon CG42588 + chr3L 12821272 exon CG42588 + chr3L_8_12820001 chr3L_12820001 RAL-392 1373 chr3L 12821178 12821181 chr3L 12821235 12821236 7 64 9.5 9.0 9.2 0.7 58 chr3L 12821178 exon CG42588 + chr3L 12821207 exon CG42588 + chr3L 12821236 exon CG42588 + chr3L_7_12820001 chr3L_12820001 RAL-392 1374 chr3L 12857985 12858004 chr3L 12858089 12858118 5 112 8.0 4.5 6.2 0.7 133 chr3L 12857985 3` UTR CG32107 - chr3L 12858052 3` UTR CG32107 - chr3L 12858118 3` UTR CG32107 - chr3L_5_12855001 chr3L_12855001 RAL-392 1375 chr3L 12872237 12872266 chr3L 12872324 12872359 8 93 6.5 5.5 6.0 1.1 122 chr3L 12872237 intergenic not near genes chr3L 12872298 intergenic not near genes chr3L 12872359 intergenic not near genes chr3L_8_12870001 chr3L_12870001 RAL-392 1376 chr3L 12874903 12874960 chr3L 12877215 12877272 jockey 15 2308 1.0 6.0 3.5 3.3 2369 chr3L 12874903 intergenic not near genes chr3L 12876088 intergenic not near genes chr3L 12877272 intergenic not near genes chr3L_15_12875001 chr3L_12875001 RAL-392 1377 chr3L 12894786 12894806 chr3L 12894884 12894893 6 95 15.0 6.5 10.8 0.5 107 chr3L 12894786 intergenic CG14118 + chr3L 12894840 intergenic CG14118 + chr3L 12894893 intergenic CG14118 + chr3L_6_12890001 chr3L_12890001 RAL-392 1378 chr3L 12928205 12928235 chr3L 12928352 12928377 11 144 4.5 5.5 5.0 1.8 172 chr3L 12928205 intergenic not near genes chr3L 12928291 intergenic not near genes chr3L 12928377 intergenic not near genes chr3L_11_12925001 chr3L_12925001 RAL-392 1379 chr3L 12932671 12932714 chr3L 12932803 12932846 14 121 4.5 6.0 5.2 2.3 175 chr3L 12932671 intergenic not near genes chr3L 12932758 intergenic not near genes chr3L 12932846 intergenic not near genes chr3L_14_12930001 chr3L_12930001 RAL-392 1380 chr3L 12932715 12932718 chr3L 12932802 12932820 4 96 4.0 6.0 5.0 0.7 105 chr3L 12932715 intergenic not near genes chr3L 12932768 intergenic not near genes chr3L 12932820 intergenic not near genes chr3L_4_12930001 chr3L_12930001 RAL-392 1381 chr3L 12943843 12943861 chr3L 12943967 12943985 9 123 2.0 0.0 1.0 4.5 142 chr3L 12943843 intergenic not near genes chr3L 12943914 intergenic not near genes chr3L 12943985 intergenic not near genes chr3L_9_12940001 chr3L_12940001 RAL-392 1382 chr3L 12957778 12957813 chr3L 12962275 12962315 copia 10 4497 8.0 7.0 7.5 1.2 4537 chr3L 12957778 intergenic not near genes chr3L 12960046 intergenic not near genes chr3L 12962315 intergenic not near genes chr3L_10_12960001 chr3L_12960001 RAL-392 1383 chr3L 12977666 12977694 chr3L 12977940 12977974 5 274 6.5 8.5 7.5 0.6 308 chr3L 12977666 intergenic not near genes chr3L 12977820 intergenic not near genes chr3L 12977974 intergenic not near genes chr3L_5_12975001 chr3L_12975001 RAL-392 1384 chr3L 12978296 12978347 chr3L 12978413 12978449 16 112 3.0 2.5 2.8 4.2 153 chr3L 12978296 intergenic not near genes chr3L 12978372 intergenic not near genes chr3L 12978449 intergenic not near genes chr3L_16_12975001 chr3L_12975001 RAL-392 1385 chr3L 12980510 12980553 chr3L 12980611 12980666 10 106 5.5 0.0 2.8 2.6 156 chr3L 12980510 intergenic not near genes chr3L 12980588 intergenic not near genes chr3L 12980666 intergenic not near genes chr3L_10_12980001 chr3L_12980001 RAL-392 1386 chr3L 13085039 13085082 chr3L 13085133 13085148 7 89 5.0 2.5 3.8 1.5 109 chr3L 13085039 intergenic not near genes chr3L 13085094 intergenic not near genes chr3L 13085148 intergenic not near genes chr3L_7_13085001 chr3L_13085001 RAL-392 1387 chr3L 13095798 13095833 chr3L 13095906 13095922 12 104 6.0 0.0 3.0 3.0 124 chr3L 13095798 intergenic not near genes chr3L 13095860 intergenic not near genes chr3L 13095922 intergenic not near genes chr3L_12_13095001 chr3L_13095001 RAL-392 1388 chr3L 13182429 13182436 chr3L 13182527 13182534 5 98 20.0 1.5 10.8 0.4 105 chr3L 13182429 intergenic not near genes chr3L 13182482 intergenic not near genes chr3L 13182534 intergenic not near genes chr3L_5_13180001 chr3L_13180001 RAL-392 1389 chr3L 13365029 13365042 chr3L 13365127 13365137 4 97 9.5 0.0 4.8 0.7 108 chr3L 13365029 intergenic not near genes chr3L 13365083 intergenic not near genes chr3L 13365137 intergenic not near genes chr3L_4_13365001 chr3L_13365001 RAL-392 1390 chr3L 13375891 13375909 chr3L 13375991 13376009 5 100 7.0 3.0 5.0 0.8 118 chr3L 13375891 intergenic not near genes chr3L 13375950 intergenic not near genes chr3L 13376009 intergenic not near genes chr3L_5_13375001 chr3L_13375001 RAL-392 1391 chr3L 13403892 13403918 chr3L 23447459 23447459 4 10043553 8.0 13.5 10.8 0.3 10043567 chr3L 13403892 intergenic not near genes chr3L 18425676 intergenic not near genes chr3L 23447459 intergenic not near genes chr3L_4_18425001 chr3L_18425001 RAL-392 1392 chr3L 13477004 13477034 chr3L 13477101 13477126 7 95 0.0 6.5 3.2 1.7 122 chr3L 13477004 intergenic not near genes chr3L 13477065 intergenic stv + chr3L 13477126 intergenic stv + chr3L_7_13475001 chr3L_13475001 RAL-392 1393 chr3L 13525150 13525181 chr3L 13532951 13532982 roo 11 7806 12.0 10.0 11.0 0.9 7832 chr3L 13525150 intergenic not near genes chr3L 13529066 intergenic not near genes chr3L 13532982 intergenic not near genes chr3L_11_13525001 chr3L_13525001 RAL-392 1394 chr3L 13574606 13574618 chr3L 13580137 13580149 Rt1c 5 5531 1.5 4.5 3.0 1.2 5543 chr3L 13574606 intron bru-3 - chr3L 13577378 intron bru-3 - chr3L 13580149 intron bru-3 - chr3L_5_13575001 chr3L_13575001 RAL-392 1395 chr3L 13629508 13629542 chr3L 13629639 13629673 6 128 2.5 8.0 5.2 1.0 165 chr3L 13629508 intron bru-3 - chr3L 13629590 intron bru-3 - chr3L 13629673 intron bru-3 - chr3L_6_13625001 chr3L_13625001 RAL-392 1396 chr3L 13677508 13677540 chr3L 13677605 13677637 12 94 6.0 3.0 4.5 2.2 129 chr3L 13677508 intron bru-3 - chr3L 13677572 intron bru-3 - chr3L 13677637 intron bru-3 - chr3L_12_13675001 chr3L_13675001 RAL-392 1397 chr3L 13692566 13692617 chr3L 13692662 13692714 5 97 2.0 1.5 1.8 1.8 148 chr3L 13692566 intron bru-3 - chr3L 13692640 intron bru-3 - chr3L 13692714 intron bru-3 - chr3L_5_13690001 chr3L_13690001 RAL-392 1398 chr3L 13767889 13767943 chr3L 13767990 13768044 9 98 1.0 1.0 1.0 4.5 155 chr3L 13767889 intron bru-3 - chr3L 13767966 intron bru-3 - chr3L 13768044 intron bru-3 - chr3L_9_13765001 chr3L_13765001 RAL-392 1399 chr3L 13804530 13804573 chr3L 13822836 13822844 roo 11 18289 6.0 3.5 4.8 1.9 18314 chr3L 13804530 intergenic not near genes chr3L 13813687 intergenic not near genes chr3L 13822844 intergenic not near genes chr3L_11_13810001 chr3L_13810001 RAL-392 1400 chr3L 13841146 13841157 chr3L 13841253 13841264 5 107 5.0 6.0 5.5 0.8 118 chr3L 13841146 3` UTR CG8757 - chr3L 13841205 3` UTR CG8757 - chr3L 13841264 3` UTR CG8757 - chr3L_5_13840001 chr3L_13840001 RAL-392 1401 chr3L 13865608 13865656 chr3L 13865708 13865748 18 93 5.5 4.5 5.0 3.0 140 chr3L 13865608 intron CG8745 - chr3L 13865678 intron CG8745 - chr3L 13865748 intron CG8745 - chr3L_18_13865001 chr3L_13865001 RAL-392 1402 chr3L 13884372 13884385 chr3L 13884483 13884496 6 111 0.5 3.5 2.0 2.0 124 chr3L 13884372 intron dysc - chr3L 13884434 intron dysc - chr3L 13884496 intron dysc - chr3L_6_13880001 chr3L_13880001 RAL-392 1403 chr3L 13892090 13892133 chr3L 13892209 13892227 4 110 53.0 41.0 47.0 0.1 137 chr3L 13892090 intron dysc - chr3L 13892158 intron dysc - chr3L 13892227 intron dysc - chr3L_4_13890001 chr3L_13890001 RAL-392 1404 chr3L 13931366 13931371 chr3L 13931491 13931496 5 124 0.5 9.0 4.8 0.9 130 chr3L 13931366 intron Gl + chr3L 13931431 intron Gl + chr3L 13931496 intron Gl + chr3L_5_13930001 chr3L_13930001 RAL-392 1405 chr3L 14031266 14031310 chr3L 14031367 14031401 4 93 9.0 8.5 8.8 0.4 135 chr3L 14031266 intron endos - chr3L 14031334 intron endos - chr3L 14031401 5` UTR endos - chr3L_4_14030001 chr3L_14030001 RAL-392 1406 chr3L 14061649 14061660 chr3L 14061758 14061759 4 105 7.5 0.0 3.8 0.8 110 chr3L 14061649 intron CG32138 + chr3L 14061704 intron CG32138 + chr3L 14061759 intron CG32138 + chr3L_4_14060001 chr3L_14060001 RAL-392 1407 chr3L 14099417 14099431 chr3L 14099527 14099541 4 109 5.0 16.0 10.5 0.3 124 chr3L 14099417 intergenic not near genes chr3L 14099479 intergenic not near genes chr3L 14099541 intergenic not near genes chr3L_4_14095001 chr3L_14095001 RAL-392 1408 chr3L 14107242 14107293 chr3L 14107339 14107390 9 92 4.0 0.0 2.0 3.0 148 chr3L 14107242 intron Sox21a - chr3L 14107316 intron Sox21a - chr3L 14107390 intron Sox21a - chr3L_9_14105001 chr3L_14105001 RAL-392 1409 chr3L 14175342 14175374 chr3L 14175503 14175506 18 163 5.0 3.0 4.0 3.6 164 chr3L 14175342 intergenic D - chr3L 14175424 intergenic D - chr3L 14175506 intergenic D - chr3L_18_14175001 chr3L_14175001 RAL-392 1410 chr3L 14194703 14194736 chr3L 14194799 14194832 16 91 6.0 6.0 6.0 2.3 129 chr3L 14194703 intron nuf + chr3L 14194768 intron nuf + chr3L 14194832 intron nuf + chr3L_16_14190001 chr3L_14190001 RAL-392 1411 chr3L 14214825 14214867 chr3L 14214921 14214972 12 95 0.0 4.0 2.0 4.0 147 chr3L 14214825 intron nuf + chr3L 14214898 intron nuf + chr3L 14214972 intron nuf + chr3L_12_14210001 chr3L_14210001 RAL-392 1412 chr3L 14245569 14245593 chr3L 14245660 14245707 1360 6 107 3.0 4.0 3.5 1.3 138 chr3L 14245569 3` UTR CR44561 - chr3L 14245638 3` UTR CR44561 - chr3L 14245707 intergenic CR44561 -,CR44560 + chr3L_6_14245001 chr3L_14245001 RAL-392 1413 chr3L 14267399 14267406 chr3L 14271824 14271838 F-element 5 4428 4.0 1.0 2.5 1.4 4439 chr3L 14267399 intergenic not near genes chr3L 14269618 intergenic not near genes chr3L 14271838 intergenic not near genes chr3L_5_14265001 chr3L_14265001 RAL-392 1414 chr3L 14282599 14282604 chr3L 14282670 14282678 4 72 1.0 1.5 1.2 1.8 79 chr3L 14282599 intron fz + chr3L 14282638 intron fz + chr3L 14282678 intron fz + chr3L_4_14280001 chr3L_14280001 RAL-392 1415 chr3L 14312014 14312049 chr3L 14316838 14316862 X-element 4 4814 1.0 1.5 1.2 1.8 4848 chr3L 14312014 exon fz + chr3L 14314438 intron fz + chr3L 14316862 intron fz + chr3L_4_14310001 chr3L_14310001 RAL-392 1416 chr3L 14320614 14320664 chr3L 14320772 14320822 18 152 3.0 2.0 2.5 5.1 208 chr3L 14320614 intron fz + chr3L 14320718 intron fz + chr3L 14320822 intron fz + chr3L_18_14320001 chr3L_14320001 RAL-392 1417 chr3L 14338290 14338326 chr3L 14338395 14338437 7 107 0.5 7.0 3.8 1.5 147 chr3L 14338290 intron fz + chr3L 14338364 intron fz + chr3L 14338437 intron fz + chr3L_7_14335001 chr3L_14335001 RAL-392 1418 chr3L 14441580 14441601 chr3L 14441749 14441769 4 167 12.0 7.5 9.8 0.4 189 chr3L 14441580 intron bbg - chr3L 14441674 intron bbg - chr3L 14441769 intron bbg - chr3L_4_14440001 chr3L_14440001 RAL-392 1419 chr3L 14441604 14441619 chr3L 14441744 14441788 4 158 8.0 7.0 7.5 0.5 184 chr3L 14441604 intron bbg - chr3L 14441696 intron bbg - chr3L 14441788 intron bbg - chr3L_4_14440001 chr3L_14440001 RAL-392 1420 chr3L 14444718 14444732 chr3L 14444895 14444927 6 190 4.5 4.5 4.5 1.1 209 chr3L 14444718 intron bbg - chr3L 14444822 intron bbg - chr3L 14444927 intron bbg - chr3L_6_14440001 chr3L_14440001 RAL-392 1421 chr3L 14455345 14455398 chr3L 14455446 14455496 8 94 3.0 0.0 1.5 3.2 151 chr3L 14455345 intron bbg - chr3L 14455420 intron bbg - chr3L 14455496 intron bbg - chr3L_8_14455001 chr3L_14455001 RAL-392 1422 chr3L 14468446 14468475 chr3L 14473665 14473701 copia 19 5223 5.5 4.0 4.8 3.3 5255 chr3L 14468446 intron bbg - chr3L 14471074 intron bbg - chr3L 14473701 intron bbg - chr3L_19_14470001 chr3L_14470001 RAL-392 1423 chr3L 14522082 14522125 chr3L 14522201 14522244 12 117 2.0 4.0 3.0 3.0 162 chr3L 14522082 intron bbg - chr3L 14522163 intron bbg - chr3L 14522244 intron bbg - chr3L_12_14520001 chr3L_14520001 RAL-392 1424 chr3L 14522810 14522852 chr3L 14522903 14522909 7 84 4.0 4.0 4.0 1.4 99 chr3L 14522810 intron bbg - chr3L 14522860 intron bbg - chr3L 14522909 intron bbg - chr3L_7_14520001 chr3L_14520001 RAL-392 1425 chr3L 14537247 14537259 chr3L 14537348 14537360 8 101 1.0 0.0 0.5 5.3 113 chr3L 14537247 3` UTR CG43246 + chr3L 14537304 intergenic CG43246 +,Mpcp + chr3L 14537360 intergenic CG43246 +,Mpcp + chr3L_8_14535001 chr3L_14535001 RAL-392 1426 chr3L 14596198 14596202 chr3L 14596314 14596317 4 116 5.0 3.0 4.0 0.8 119 chr3L 14596198 intron HGTX - chr3L 14596258 intron HGTX - chr3L 14596317 intron HGTX - chr3L_4_14595001 chr3L_14595001 RAL-392 1427 chr3L 14653909 14653943 chr3L 14654051 14654053 5 126 4.5 4.0 4.2 1.0 144 chr3L 14653909 intron dlp + chr3L 14653981 intron dlp + chr3L 14654053 intron dlp + chr3L_5_14650001 chr3L_14650001 RAL-392 1428 chr3L 14724811 14724823 chr3L 14724897 14724927 6 101 0.5 4.0 2.2 1.9 116 chr3L 14724811 intron ome + chr3L 14724869 intron ome + chr3L 14724927 intron ome + chr3L_6_14720001 chr3L_14720001 RAL-392 1429 chr3L 14911027 14911075 chr3L 14913927 14913953 10 2881 29.5 16.5 23.0 0.4 2926 chr3L 14911027 intron DCX-EMAP + chr3L 14912490 intron DCX-EMAP + chr3L 14913953 intron DCX-EMAP + chr3L_10_14910001 chr3L_14910001 RAL-392 1430 chr3L 14959971 14960016 chr3L 14960075 14960120 16 101 3.5 4.5 4.0 3.2 149 chr3L 14959971 intergenic not near genes chr3L 14960046 intergenic not near genes chr3L 14960120 intergenic not near genes chr3L_16_14960001 chr3L_14960001 RAL-392 1431 chr3L 14970745 14970762 chr3L 14971075 14971092 F-element 8 330 11.5 9.0 10.2 0.7 347 chr3L 14970745 intergenic Tom + chr3L 14970918 intergenic not near genes chr3L 14971092 intergenic not near genes chr3L_8_14970001 chr3L_14970001 RAL-392 1432 chr3L 15085033 15085083 chr3L 15086219 15086225 1360 5 1176 5.0 3.5 4.2 1.0 1192 chr3L 15085033 intron cp309 - chr3L 15085629 intron cp309 - chr3L 15086225 intron cp309 - chr3L_5_15085001 chr3L_15085001 RAL-392 1433 chr3L 15151208 15151242 chr3L 15151402 15151446 19 198 3.0 3.0 3.0 4.8 238 chr3L 15151208 intron FucTA + chr3L 15151327 intron FucTA + chr3L 15151446 intron FucTA + chr3L_19_15150001 chr3L_15150001 RAL-392 1434 chr3L 15177338 15177370 chr3L 15177443 15177465 4 98 5.5 2.5 4.0 0.8 127 chr3L 15177338 intergenic not near genes chr3L 15177402 intergenic not near genes chr3L 15177465 intergenic not near genes chr3L_4_15175001 chr3L_15175001 RAL-392 1435 chr3L 15219726 15219774 chr3L 15219828 15219876 7 98 4.5 5.0 4.8 1.2 150 chr3L 15219726 intergenic not near genes chr3L 15219801 intergenic not near genes chr3L 15219876 intergenic not near genes chr3L_7_15215001 chr3L_15215001 RAL-392 1436 chr3L 15273340 15273360 chr3L 15273506 15273526 5 166 2.0 10.5 6.2 0.7 186 chr3L 15273340 intergenic not near genes chr3L 15273433 intergenic not near genes chr3L 15273526 intergenic not near genes chr3L_5_15270001 chr3L_15270001 RAL-392 1437 chr3L 15295752 15295801 chr3L 15298615 15298653 gypsy5 16 2859 6.5 13.0 9.8 1.5 2901 chr3L 15295752 intergenic not near genes chr3L 15297202 intergenic not near genes chr3L 15298653 intergenic Best4 + chr3L_16_15295001 chr3L_15295001 RAL-392 1438 chr3L 15423740 15423779 chr3L 15426604 15426640 opus 8 2862 5.0 1.5 3.2 1.9 2900 chr3L 15423740 intergenic not near genes chr3L 15425190 intergenic not near genes chr3L 15426640 intergenic not near genes chr3L_8_15425001 chr3L_15425001 RAL-392 1439 chr3L 15438371 15438399 chr3L 15438740 15438783 4 373 2.5 4.5 3.5 0.9 412 chr3L 15438371 intergenic not near genes chr3L 15438577 intergenic not near genes chr3L 15438783 intergenic not near genes chr3L_4_15435001 chr3L_15435001 RAL-392 1440 chr3L 15443576 15443606 chr3L 15443672 15443687 4 92 4.0 1.0 2.5 1.1 111 chr3L 15443576 intergenic not near genes chr3L 15443632 intergenic not near genes chr3L 15443687 intergenic not near genes chr3L_4_15440001 chr3L_15440001 RAL-392 1441 chr3L 15482322 15482349 chr3L 15482419 15482440 4 100 1.5 5.0 3.2 1.0 118 chr3L 15482322 intergenic not near genes chr3L 15482381 intergenic not near genes chr3L 15482440 intergenic not near genes chr3L_4_15480001 chr3L_15480001 RAL-392 1442 chr3L 15541608 15541647 chr3L 15541711 15541758 18 108 8.0 6.0 7.0 2.2 150 chr3L 15541608 intron CrebA + chr3L 15541683 intron CrebA + chr3L 15541758 intron CrebA + chr3L_18_15540001 chr3L_15540001 RAL-392 1443 chr3L 15544270 15544292 chr3L 15544390 15544412 4 120 8.0 9.5 8.8 0.4 142 chr3L 15544270 intron CrebA + chr3L 15544341 intron CrebA + chr3L 15544412 intron CrebA + chr3L_4_15540001 chr3L_15540001 RAL-392 1444 chr3L 15554913 15554944 chr3L 15556710 15556751 S-element 13 1801 7.0 5.5 6.2 1.8 1838 chr3L 15554913 intron AGO2 + chr3L 15555832 intron AGO2 + chr3L 15556751 intron AGO2 + chr3L_13_15555001 chr3L_15555001 RAL-392 1445 chr3L 15600148 15600196 chr3L 15600253 15600317 7 116 6.0 0.5 3.2 1.7 169 chr3L 15600148 intron RhoGAP71E + chr3L 15600232 intron RhoGAP71E + chr3L 15600317 intron RhoGAP71E + chr3L_7_15600001 chr3L_15600001 RAL-392 1446 chr3L 15633170 15633202 chr3L 15633270 15633297 7 96 3.0 2.0 2.5 2.0 127 chr3L 15633170 intron comm3 - chr3L 15633234 intron comm3 - chr3L 15633297 intron comm3 - chr3L_7_15630001 chr3L_15630001 RAL-392 1447 chr3L 15641788 15641813 chr3L 15641893 15641917 11 103 0.0 3.5 1.8 3.9 129 chr3L 15641788 intron comm3 - chr3L 15641852 intron comm3 - chr3L 15641917 intron comm3 - chr3L_11_15640001 chr3L_15640001 RAL-392 1448 chr3L 15691428 15691443 chr3L 15691503 15691505 7 92 0.0 4.5 2.2 2.2 77 chr3L 15691428 intron CG34451 - chr3L 15691466 intron CG34451 - chr3L 15691505 intron CG34451 - chr3L_7_15690001 chr3L_15690001 RAL-392 1449 chr3L 15811528 15811581 chr3L 15811633 15811655 18 101 1.0 5.5 3.2 4.3 127 chr3L 15811528 intron fwe - chr3L 15811592 intron fwe - chr3L 15811655 intron fwe - chr3L_18_15810001 chr3L_15810001 RAL-392 1450 chr3L 15832234 15832286 chr3L 15832335 15832371 23 95 3.0 4.5 3.8 4.8 137 chr3L 15832234 intergenic CG12713 +,dbo + chr3L 15832302 intergenic CG12713 +,dbo + chr3L 15832371 intergenic CG12713 +,dbo + chr3L_23_15830001 chr3L_15830001 RAL-392 1451 chr3L 15929176 15929226 chr3L 15938343 15938393 roo 24 9166 5.5 2.5 4.0 4.8 9217 chr3L 15929176 intron Pka-C3 - chr3L 15933784 intron Pka-C3 - chr3L 15938393 intron Pka-C3 - chr3L_24_15930001 chr3L_15930001 RAL-392 1452 chr3L 15981659 15981709 chr3L 15981765 15981815 6 101 6.5 8.0 7.2 0.7 156 chr3L 15981659 intron,3` UTR brm -,CG17027 + chr3L 15981737 intron,3` UTR brm -,CG17027 + chr3L 15981815 intron,3` UTR brm -,CG17027 + chr3L_6_15980001 chr3L_15980001 RAL-392 1453 chr3L 15989217 15989225 chr3L 15989318 15989328 4 101 4.0 2.5 3.2 1.0 111 chr3L 15989217 intron Hip14 + chr3L 15989272 intron Hip14 + chr3L 15989328 intron Hip14 + chr3L_4_15985001 chr3L_15985001 RAL-392 1454 chr3L 16035028 16035032 chr3L 16035130 16035134 4 102 0.0 0.0 0.0 4.0 106 chr3L 16035028 intergenic CG42538 +,CG5895 + chr3L 16035081 intergenic CG42538 +,CG5895 + chr3L 16035134 intergenic CG42538 +,CG5895 + chr3L_4_16035001 chr3L_16035001 RAL-392 1455 chr3L 16184091 16184139 chr3L 16188930 16188952 X-element 14 4827 3.0 2.0 2.5 4.0 4861 chr3L 16184091 intergenic not near genes chr3L 16186522 intergenic not near genes chr3L 16188952 intergenic not near genes chr3L_14_16185001 chr3L_16185001 RAL-392 1456 chr3L 16212794 16212822 chr3L 16212904 16212933 5 109 11.5 1.5 6.5 0.7 139 chr3L 16212794 intergenic CG13073 - chr3L 16212864 intergenic CG13073 - chr3L 16212933 intergenic CG13073 - chr3L_5_16210001 chr3L_16210001 RAL-392 1457 chr3L 16212829 16212842 chr3L 16212900 16212907 11 93 7.5 1.5 4.5 2.0 78 chr3L 16212829 intergenic CG13073 - chr3L 16212868 intergenic CG13073 - chr3L 16212907 intergenic CG13073 - chr3L_11_16210001 chr3L_16210001 RAL-392 1458 chr3L 16443820 16443876 chr3L 16446191 16446204 Doc 8 2350 0.0 8.0 4.0 1.6 2384 chr3L 16443820 intron,intron CG33158 +,dsx-c73A - chr3L 16445012 intron,intron CG33158 +,dsx-c73A - chr3L 16446204 intron,intron CG33158 +,dsx-c73A - chr3L_8_16445001 chr3L_16445001 RAL-392 1459 chr3L 16457535 16457552 chr3L 16457630 16457635 4 99 3.0 4.0 3.5 0.9 100 chr3L 16457535 intron CG33158 + chr3L 16457585 intron CG33158 + chr3L 16457635 intron CG33158 + chr3L_4_16455001 chr3L_16455001 RAL-392 1460 chr3L 16493958 16494013 chr3L 16494495 16494514 jockey 17 521 10.5 5.5 8.0 1.9 556 chr3L 16493958 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494236 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494514 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_17_16490001 chr3L_16490001 RAL-392 1461 chr3L 16533571 16533586 chr3L 16533676 16533717 11 125 3.5 2.0 2.8 2.9 146 chr3L 16533571 intron CG43373 - chr3L 16533644 intron CG43373 - chr3L 16533717 intron CG43373 - chr3L_11_16530001 chr3L_16530001 RAL-392 1462 chr3L 16540039 16540045 chr3L 16540147 16540153 4 108 15.0 5.0 10.0 0.4 114 chr3L 16540039 intron CG43373 - chr3L 16540096 intron CG43373 - chr3L 16540153 intron CG43373 - chr3L_4_16540001 chr3L_16540001 RAL-392 1463 chr3L 16540047 16540083 chr3L 16540141 16540156 9 101 7.5 4.0 5.8 1.3 109 chr3L 16540047 intron CG43373 - chr3L 16540102 intron CG43373 - chr3L 16540156 intron CG43373 - chr3L_9_16540001 chr3L_16540001 RAL-392 1464 chr3L 16563212 16563256 chr3L 16563312 16563337 4 96 4.5 0.5 2.5 1.1 125 chr3L 16563212 intergenic Mipp1 - chr3L 16563274 intergenic Mipp1 - chr3L 16563337 intergenic Mipp1 - chr3L_4_16560001 chr3L_16560001 RAL-392 1465 chr3L 16616513 16616543 chr3L 16621839 16621891 297 7 5332 2.5 4.0 3.2 1.7 5378 chr3L 16616513 3` UTR Abl - chr3L 16619202 3` UTR Abl - chr3L 16621891 3` UTR Abl - chr3L_7_16615001 chr3L_16615001 RAL-392 1466 chr3L 16684001 16684046 chr3L 16689242 16689287 copia 7 5239 2.5 1.5 2.0 2.3 5286 chr3L 16684001 intron,intron Lasp -,CG43954 - chr3L 16686644 intron,intron Lasp -,CG43954 - chr3L 16689287 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_7_16685001 chr3L_16685001 RAL-392 1467 chr3L 16714828 16714853 chr3L 16714932 16714957 4 104 31.5 32.0 31.8 0.1 129 chr3L 16714828 intron Dab + chr3L 16714892 intron Dab + chr3L 16714957 intron Dab + chr3L_4_16710001 chr3L_16710001 RAL-392 1468 chr3L 16757626 16757669 chr3L 16757736 16757769 14 107 11.5 9.5 10.5 1.2 143 chr3L 16757626 intergenic not near genes chr3L 16757698 intergenic not near genes chr3L 16757769 intergenic not near genes chr3L_14_16755001 chr3L_16755001 RAL-392 1469 chr3L 16800595 16800613 chr3L 16800725 16800762 4 142 7.5 5.0 6.2 0.6 167 chr3L 16800595 intron CG9674 - chr3L 16800678 intron CG9674 - chr3L 16800762 intron CG9674 - chr3L_4_16800001 chr3L_16800001 RAL-392 1470 chr3L 16807778 16808064 chr3L 16807877 16808136 23 93 8.0 22.5 15.2 1.4 358 chr3L 16807778 intron nudC + chr3L 16807957 intron nudC + chr3L 16808136 intron nudC + chr3L_23_16805001 chr3L_16805001 RAL-392 1471 chr3L 16818734 16818779 chr3L 16818824 16818875 16 89 10.5 11.0 10.8 1.4 141 chr3L 16818734 intron,intron nudC +,CG13024 - chr3L 16818804 intron,intron nudC +,CG13024 - chr3L 16818875 intron,intron nudC +,CG13024 - chr3L_16_16815001 chr3L_16815001 RAL-392 1472 chr3L 16836921 16836940 chr3L 16837008 16837016 4 86 5.5 7.5 6.5 0.5 95 chr3L 16836921 intergenic not near genes chr3L 16836968 intergenic not near genes chr3L 16837016 intergenic not near genes chr3L_4_16835001 chr3L_16835001 RAL-392 1473 chr3L 16845004 16845045 chr3L 16845137 16845178 10 132 4.0 6.5 5.2 1.6 174 chr3L 16845004 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845091 intergenic CG9669 -,CG9715 + chr3L 16845178 intergenic CG9669 -,CG9715 + chr3L_10_16845001 chr3L_16845001 RAL-392 1474 chr3L 16945719 16945761 chr3L 16954879 16954889 roo 11 9153 4.5 6.5 5.5 1.7 9170 chr3L 16945719 exon Obp73a + chr3L 16950304 intergenic not near genes chr3L 16954889 5` UTR Nc73EF + chr3L_11_16950001 chr3L_16950001 RAL-392 1475 chr3L 17026792 17026824 chr3L 17026873 17026898 6 87 6.5 8.5 7.5 0.7 106 chr3L 17026792 exon Fit2 + chr3L 17026845 3` UTR Fit2 + chr3L 17026898 3` UTR Fit2 + chr3L_6_17025001 chr3L_17025001 RAL-392 1476 chr3L 17027147 17027189 chr3L 17027259 17027301 15 109 7.0 5.5 6.2 2.1 154 chr3L 17027147 intergenic Fit2 +,CG7730 + chr3L 17027224 intergenic Fit2 +,CG7730 + chr3L 17027301 intergenic Fit2 +,CG7730 + chr3L_15_17025001 chr3L_17025001 RAL-392 1477 chr3L 17034933 17034967 chr3L 17035121 17035175 G2 12 205 2.5 5.0 3.8 2.5 242 chr3L 17034933 intergenic not near genes chr3L 17035054 intergenic not near genes chr3L 17035175 intergenic beg + chr3L_12_17035001 chr3L_17035001 RAL-392 1478 chr3L 17084994 17085032 chr3L 17094153 17094201 roo 13 9168 6.5 5.0 5.8 1.9 9207 chr3L 17084994 intron Rbp6 - chr3L 17089598 intron Rbp6 - chr3L 17094201 intron Rbp6 - chr3L_13_17085001 chr3L_17085001 RAL-392 1479 chr3L 17120632 17120684 chr3L 17120728 17120780 18 91 4.0 6.5 5.2 2.9 148 chr3L 17120632 intron Rbp6 - chr3L 17120706 intron Rbp6 - chr3L 17120780 intron Rbp6 - chr3L_18_17120001 chr3L_17120001 RAL-392 1480 chr3L 17142734 17142758 chr3L 17142956 17143005 6 235 2.5 2.0 2.2 1.9 271 chr3L 17142734 intron Rbp6 - chr3L 17142870 intron Rbp6 - chr3L 17143005 intron Rbp6 - chr3L_6_17140001 chr3L_17140001 RAL-392 1481 chr3L 17146938 17146972 chr3L 17147037 17147048 10 99 7.5 5.5 6.5 1.3 110 chr3L 17146938 intron Rbp6 - chr3L 17146993 intron Rbp6 - chr3L 17147048 intron Rbp6 - chr3L_10_17145001 chr3L_17145001 RAL-392 1482 chr3L 17149146 17149184 chr3L 17149247 17149258 9 94 12.0 5.0 8.5 0.9 112 chr3L 17149146 intron Rbp6 - chr3L 17149202 intron Rbp6 - chr3L 17149258 intron Rbp6 - chr3L_9_17145001 chr3L_17145001 RAL-392 1483 chr3L 17237369 17237399 chr3L 17237541 17237561 5 169 8.0 6.5 7.2 0.6 192 chr3L 17237369 intron Rbp6 - chr3L 17237465 intron Rbp6 - chr3L 17237561 intron Rbp6 - chr3L_5_17235001 chr3L_17235001 RAL-392 1484 chr3L 17272242 17272263 chr3L 17272395 17272416 5 153 3.0 4.5 3.8 1.0 174 chr3L 17272242 intergenic not near genes chr3L 17272329 intergenic not near genes chr3L 17272416 intergenic not near genes chr3L_5_17270001 chr3L_17270001 RAL-392 1485 chr3L 17331053 17331097 chr3L 17331163 17331207 10 109 3.5 3.0 3.2 2.4 154 chr3L 17331053 intergenic not near genes chr3L 17331130 intergenic not near genes chr3L 17331207 intergenic not near genes chr3L_10_17330001 chr3L_17330001 RAL-392 1486 chr3L 17344611 17344652 chr3L 17344714 17344755 8 94 4.0 5.0 4.5 1.5 144 chr3L 17344611 exon brv2 - chr3L 17344683 5` UTR brv2 - chr3L 17344755 intergenic brv2 -,Mip - chr3L_8_17340001 chr3L_17340001 RAL-392 1487 chr3L 17492464 17492509 chr3L 17492789 17492801 9 307 6.5 5.0 5.8 1.3 337 chr3L 17492464 intron Oatp74D + chr3L 17492632 intron Oatp74D + chr3L 17492801 intron Oatp74D + chr3L_9_17490001 chr3L_17490001 RAL-392 1488 chr3L 17510735 17510762 chr3L 17510839 17510858 6 98 5.5 3.5 4.5 1.1 123 chr3L 17510735 exon Oatp74D + chr3L 17510796 intron Oatp74D + chr3L 17510858 intron Oatp74D + chr3L_6_17510001 chr3L_17510001 RAL-392 1489 chr3L 17516971 17516998 chr3L 17524539 17524575 412 4 7567 6.5 5.0 5.8 0.6 7604 chr3L 17516971 intron CG7564 + chr3L 17520773 intron CG7564 + chr3L 17524575 3` UTR CG7564 + chr3L_4_17520001 chr3L_17520001 RAL-392 1490 chr3L 17585315 17585362 chr3L 17585619 17585667 6 310 32.0 50.0 41.0 0.1 352 chr3L 17585315 intron Eip74EF - chr3L 17585491 intron Eip74EF - chr3L 17585667 intron Eip74EF - chr3L_6_17585001 chr3L_17585001 RAL-392 1491 chr3L 17592766 17592817 chr3L 17592877 17592928 18 108 11.5 13.0 12.2 1.4 162 chr3L 17592766 intron Eip74EF - chr3L 17592847 intron Eip74EF - chr3L 17592928 intron Eip74EF - chr3L_18_17590001 chr3L_17590001 RAL-392 1492 chr3L 17659727 17659756 chr3L 17659824 17659843 5 89 19.0 19.0 19.0 0.2 116 chr3L 17659727 intergenic Crtc - chr3L 17659785 intergenic Crtc - chr3L 17659843 3` UTR Crtc - chr3L_5_17655001 chr3L_17655001 RAL-392 1493 chr3L 17730830 17730883 chr3L 17738180 17738199 mdg1 18 7343 3.5 4.0 3.8 3.8 7369 chr3L 17730830 intron Ccn + chr3L 17734514 intron Ccn + chr3L 17738199 intron Ccn + chr3L_18_17730001 chr3L_17730001 RAL-392 1494 chr3L 17787664 17787689 chr3L 17787777 17787802 5 113 6.5 9.0 7.8 0.6 138 chr3L 17787664 intergenic not near genes chr3L 17787733 intergenic not near genes chr3L 17787802 intergenic not near genes chr3L_5_17785001 chr3L_17785001 RAL-392 1495 chr3L 17789827 17789871 chr3L 17789923 17789967 15 93 8.5 9.5 9.0 1.5 140 chr3L 17789827 intergenic not near genes chr3L 17789897 intergenic not near genes chr3L 17789967 intergenic not near genes chr3L_15_17785001 chr3L_17785001 RAL-392 1496 chr3L 17799789 17799838 chr3L 17801596 17801644 S-element 12 1805 8.0 4.5 6.2 1.7 1855 chr3L 17799789 intron NUCB1 - chr3L 17800716 intron NUCB1 - chr3L 17801644 intron NUCB1 - chr3L_12_17800001 chr3L_17800001 RAL-392 1497 chr3L 17834320 17834354 chr3L 17834490 17834531 7 179 2.5 3.0 2.8 1.8 211 chr3L 17834320 intron Grd + chr3L 17834426 intron Grd + chr3L 17834531 intron Grd + chr3L_7_17830001 chr3L_17830001 RAL-392 1498 chr3L 17837608 17837655 chr3L 17837716 17837717 15 97 1.0 3.0 2.0 5.0 109 chr3L 17837608 exon Grd + chr3L 17837662 intron Grd + chr3L 17837717 intron Grd + chr3L_15_17835001 chr3L_17835001 RAL-392 1499 chr3L 17918383 17918398 chr3L 17921174 17921221 opus 5 2815 1.0 2.5 1.8 1.8 2838 chr3L 17918383 intergenic not near genes chr3L 17919802 intergenic not near genes chr3L 17921221 intergenic not near genes chr3L_5_17915001 chr3L_17915001 RAL-392 1500 chr3L 17991561 17991589 chr3L 17991659 17991687 8 97 11.0 6.5 8.8 0.8 126 chr3L 17991561 intron Eip75B - chr3L 17991624 intron Eip75B - chr3L 17991687 intron Eip75B - chr3L_8_17990001 chr3L_17990001 RAL-392 1501 chr3L 18000653 18000707 chr3L 18000749 18000799 21 94 9.5 11.0 10.2 1.9 146 chr3L 18000653 intron Eip75B - chr3L 18000726 intron Eip75B - chr3L 18000799 intron Eip75B - chr3L_21_18000001 chr3L_18000001 RAL-392 1502 chr3L 18009944 18009973 chr3L 18010432 18010471 10 498 6.0 3.5 4.8 1.7 527 chr3L 18009944 intron Eip75B - chr3L 18010208 intron Eip75B - chr3L 18010471 intron Eip75B - chr3L_10_18010001 chr3L_18010001 RAL-392 1503 chr3L 18047691 18047718 chr3L 18056768 18056788 roo 10 9076 6.5 3.5 5.0 1.7 9097 chr3L 18047691 intron Eip75B - chr3L 18052240 intron Eip75B - chr3L 18056788 intron Eip75B - chr3L_10_18050001 chr3L_18050001 RAL-392 1504 chr3L 18106251 18106274 chr3L 18106374 18106378 6 123 7.5 2.5 5.0 1.0 127 chr3L 18106251 intergenic CG13698 -,mRpS26 + chr3L 18106314 intergenic CG13698 -,mRpS26 + chr3L 18106378 intergenic mRpS26 +,CG13698 - chr3L_6_18105001 chr3L_18105001 RAL-392 1505 chr3L 18152725 18152749 chr3L 18152855 18152862 5 126 16.0 14.0 15.0 0.3 137 chr3L 18152725 intron CG7330 + chr3L 18152794 intron CG7330 + chr3L 18152862 intron CG7330 + chr3L_5_18150001 chr3L_18150001 RAL-392 1506 chr3L 18172599 18172702 chr3L 18172685 18172798 11 95 4.5 12.0 8.2 1.2 199 chr3L 18172599 intron W - chr3L 18172698 intron W - chr3L 18172798 intron W - chr3L_11_18170001 chr3L_18170001 RAL-392 1507 chr3L 18198929 18198931 chr3L 24821492 24821494 8 6622562 4.0 11.5 7.8 0.9 6622565 chr3L 18198929 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821494 intergenic not near genes chr3L_8_21510001 chr3L_21510001 RAL-392 1508 chr3L 18257129 18257157 chr3L 18257227 18257255 9 98 2.5 6.5 4.5 1.6 126 chr3L 18257129 intergenic not near genes chr3L 18257192 intergenic not near genes chr3L 18257255 intergenic not near genes chr3L_9_18255001 chr3L_18255001 RAL-392 1509 chr3L 18262452 18262485 chr3L 18262555 18262588 5 101 8.0 4.0 6.0 0.7 136 chr3L 18262452 intergenic not near genes chr3L 18262520 intergenic not near genes chr3L 18262588 intergenic not near genes chr3L_5_18260001 chr3L_18260001 RAL-392 1510 chr3L 18301330 18301379 chr3L 18301439 18301483 21 106 1.5 4.0 2.8 5.5 153 chr3L 18301330 intergenic CG13700 - chr3L 18301406 intergenic CG13700 - chr3L 18301483 intergenic CG13700 - chr3L_21_18300001 chr3L_18300001 RAL-392 1511 chr3L 18318719 18318757 chr3L 18318824 18318831 5 92 6.0 6.5 6.2 0.7 112 chr3L 18318719 intergenic not near genes chr3L 18318775 intergenic not near genes chr3L 18318831 intergenic not near genes chr3L_5_18315001 chr3L_18315001 RAL-392 1512 chr3L 18343671 18343681 chr3L 18343943 18343948 4 280 2.0 4.5 3.2 1.0 277 chr3L 18343671 intergenic not near genes chr3L 18343810 intergenic not near genes chr3L 18343948 intergenic not near genes chr3L_4_18340001 chr3L_18340001 RAL-392 1513 chr3L 18376061 18376111 chr3L 18376169 18376200 4 100 6.5 1.5 4.0 0.8 139 chr3L 18376061 intergenic not near genes chr3L 18376130 intergenic not near genes chr3L 18376200 intergenic not near genes chr3L_4_18375001 chr3L_18375001 RAL-392 1514 chr3L 18406112 18406149 chr3L 18406208 18406245 10 94 6.5 4.5 5.5 1.5 133 chr3L 18406112 intergenic not near genes chr3L 18406178 intergenic not near genes chr3L 18406245 intergenic not near genes chr3L_10_18405001 chr3L_18405001 RAL-392 1515 chr3L 18408711 18408761 chr3L 18408817 18408867 16 104 6.0 6.0 6.0 2.3 156 chr3L 18408711 intergenic not near genes chr3L 18408789 intergenic not near genes chr3L 18408867 intergenic not near genes chr3L_16_18405001 chr3L_18405001 RAL-392 1516 chr3L 18436044 18436090 chr3L 18436161 18436208 15 116 2.5 5.5 4.0 3.0 164 chr3L 18436044 intergenic not near genes chr3L 18436126 intergenic not near genes chr3L 18436208 intergenic not near genes chr3L_15_18435001 chr3L_18435001 RAL-392 1517 chr3L 18448600 18448619 chr3L 18448712 18448731 6 112 9.5 6.5 8.0 0.7 131 chr3L 18448600 intergenic not near genes chr3L 18448666 intergenic not near genes chr3L 18448731 intergenic not near genes chr3L_6_18445001 chr3L_18445001 RAL-392 1518 chr3L 18456253 18456302 chr3L 18456361 18456410 9 103 4.5 4.5 4.5 1.6 157 chr3L 18456253 intergenic CR44670 - chr3L 18456332 intergenic CR44670 - chr3L 18456410 3` UTR CR44670 - chr3L_9_18455001 chr3L_18455001 RAL-392 1519 chr3L 18464473 18464508 chr3L 18464574 18464581 5 86 6.5 6.0 6.2 0.7 108 chr3L 18464473 intergenic not near genes chr3L 18464527 intergenic not near genes chr3L 18464581 intergenic not near genes chr3L_5_18460001 chr3L_18460001 RAL-392 1520 chr3L 18528613 18528661 chr3L 18537789 18537796 roo 12 9171 2.0 2.0 2.0 4.0 9183 chr3L 18528613 intergenic not near genes chr3L 18533204 intergenic not near genes chr3L 18537796 intergenic not near genes chr3L_12_18530001 chr3L_18530001 RAL-392 1521 chr3L 18593940 18593979 chr3L 18595930 18595956 Doc 8 1995 6.5 1.5 4.0 1.6 2016 chr3L 18593940 intergenic term - chr3L 18594948 intergenic not near genes chr3L 18595956 intergenic CR45389 + chr3L_8_18590001 chr3L_18590001 RAL-392 1522 chr3L 18710771 18710787 chr3L 18718741 18718757 Stalker2 7 7970 3.5 0.5 2.0 2.3 7986 chr3L 18710771 intergenic not near genes chr3L 18714764 intergenic not near genes chr3L 18718757 intergenic not near genes chr3L_7_18710001 chr3L_18710001 RAL-392 1523 chr3L 18721764 18721784 chr3L 18721865 18721895 4 108 6.5 10.0 8.2 0.4 131 chr3L 18721764 intergenic CG12477 - chr3L 18721830 intergenic CG12477 - chr3L 18721895 3` UTR CG12477 - chr3L_4_18720001 chr3L_18720001 RAL-392 1524 chr3L 18721788 18721795 chr3L 18721864 18721906 4 102 6.5 10.0 8.2 0.4 118 chr3L 18721788 intergenic CG12477 - chr3L 18721847 intergenic CG12477 - chr3L 18721906 3` UTR CG12477 - chr3L_4_18720001 chr3L_18720001 RAL-392 1525 chr3L 18736037 18736061 chr3L 18736152 18736176 10 115 7.0 4.5 5.8 1.5 139 chr3L 18736037 intergenic not near genes chr3L 18736106 intergenic not near genes chr3L 18736176 intergenic not near genes chr3L_10_18735001 chr3L_18735001 RAL-392 1526 chr3L 18772393 18772437 chr3L 18781094 18781118 roo 21 8696 4.0 3.0 3.5 4.7 8725 chr3L 18772393 intron ftz-f1 - chr3L 18776756 intron ftz-f1 - chr3L 18781118 intron ftz-f1 - chr3L_21_18775001 chr3L_18775001 RAL-392 1527 chr3L 18784374 18784405 chr3L 18784483 18784514 10 108 9.5 8.5 9.0 1.0 140 chr3L 18784374 intron ftz-f1 - chr3L 18784444 intron ftz-f1 - chr3L 18784514 intron ftz-f1 - chr3L_10_18780001 chr3L_18780001 RAL-392 1528 chr3L 18792553 18792601 chr3L 18792655 18792703 22 100 5.0 3.0 4.0 4.4 150 chr3L 18792553 intron ftz-f1 - chr3L 18792628 intron ftz-f1 - chr3L 18792703 intron ftz-f1 - chr3L_22_18790001 chr3L_18790001 RAL-392 1529 chr3L 18810139 18810174 chr3L 18810224 18810271 16 93 6.0 9.5 7.8 1.8 132 chr3L 18810139 intron CG14073 - chr3L 18810205 intron CG14073 - chr3L 18810271 intron CG14073 - chr3L_16_18810001 chr3L_18810001 RAL-392 1530 chr3L 18833772 18833815 chr3L 18834950 18834962 1360 9 1172 4.5 4.5 4.5 1.6 1190 chr3L 18833772 intron Indy - chr3L 18834367 intron Indy - chr3L 18834962 intron Indy - chr3L_9_18830001 chr3L_18830001 RAL-392 1531 chr3L 18836365 18836408 chr3L 18836464 18836511 7 100 6.5 8.0 7.2 0.9 146 chr3L 18836365 intron Indy - chr3L 18836438 intron Indy - chr3L 18836511 intron Indy - chr3L_7_18835001 chr3L_18835001 RAL-392 1532 chr3L 18839715 18839767 chr3L 18839818 18839870 18 101 5.5 4.5 5.0 3.0 155 chr3L 18839715 intron Indy - chr3L 18839792 intron Indy - chr3L 18839870 intron Indy - chr3L_18_18835001 chr3L_18835001 RAL-392 1533 chr3L 18843846 18843876 chr3L 18843963 18843989 10 115 11.0 11.5 11.2 0.8 143 chr3L 18843846 intron Indy - chr3L 18843918 intron Indy - chr3L 18843989 intron Indy - chr3L_10_18840001 chr3L_18840001 RAL-392 1534 chr3L 18868944 18868995 chr3L 18869045 18869060 9 93 15.0 14.0 14.5 0.6 116 chr3L 18868944 3` UTR Dysb + chr3L 18869002 3` UTR Dysb + chr3L 18869060 3` UTR Dysb + chr3L_9_18865001 chr3L_18865001 RAL-392 1535 chr3L 18885976 18886007 chr3L 18886072 18886083 6 92 6.0 7.5 6.8 0.8 107 chr3L 18885976 intron CG3961 - chr3L 18886030 intron CG3961 - chr3L 18886083 intron CG3961 - chr3L_6_18885001 chr3L_18885001 RAL-392 1536 chr3L 18887301 18887324 chr3L 18887427 18887450 5 125 10.5 14.5 12.5 0.4 149 chr3L 18887301 intron CG3961 - chr3L 18887376 intron CG3961 - chr3L 18887450 intron CG3961 - chr3L_5_18885001 chr3L_18885001 RAL-392 1537 chr3L 18933610 18933661 chr3L 18933724 18933774 6 109 25.0 24.5 24.8 0.2 164 chr3L 18933610 intron CG32204 - chr3L 18933692 intron CG32204 - chr3L 18933774 intron CG32204 - chr3L_6_18930001 chr3L_18930001 RAL-392 1538 chr3L 19117052 19117075 chr3L 19124488 19124542 mdg1 10 7459 10.5 4.5 7.5 1.2 7490 chr3L 19117052 intron CG14082 - chr3L 19120797 intron CG14082 - chr3L 19124542 intron CG14082 - chr3L_10_19120001 chr3L_19120001 RAL-392 1539 chr3L 19133658 19133689 chr3L 19133762 19133782 8 99 8.5 6.5 7.5 0.9 124 chr3L 19133658 intron CG14082 - chr3L 19133720 intron CG14082 - chr3L 19133782 intron CG14082 - chr3L_8_19130001 chr3L_19130001 RAL-392 1540 chr3L 19182367 19182414 chr3L 19182468 19182500 10 96 8.5 5.5 7.0 1.2 133 chr3L 19182367 intron fz2 - chr3L 19182434 intron fz2 - chr3L 19182500 intron fz2 - chr3L_10_19180001 chr3L_19180001 RAL-392 1541 chr3L 19208054 19208091 chr3L 19209448 19209460 Doc 6 1385 4.0 5.0 4.5 1.1 1406 chr3L 19208054 intron fz2 - chr3L 19208757 intron fz2 - chr3L 19209460 intron fz2 - chr3L_6_19205001 chr3L_19205001 RAL-392 1542 chr3L 19210106 19210128 chr3L 19210222 19210244 5 113 0.0 1.0 0.5 3.3 138 chr3L 19210106 intron fz2 - chr3L 19210175 intron fz2 - chr3L 19210244 intron fz2 - chr3L_5_19210001 chr3L_19210001 RAL-392 1543 chr3L 19216494 19216534 chr3L 19216591 19216606 10 88 13.0 14.5 13.8 0.7 112 chr3L 19216494 intron fz2 - chr3L 19216550 intron fz2 - chr3L 19216606 intron fz2 - chr3L_10_19215001 chr3L_19215001 RAL-392 1544 chr3L 19238731 19238752 chr3L 19238839 19238879 6 123 16.5 16.5 16.5 0.3 148 chr3L 19238731 intergenic not near genes chr3L 19238805 intergenic not near genes chr3L 19238879 intergenic not near genes chr3L_6_19235001 chr3L_19235001 RAL-392 1545 chr3L 19262206 19262244 chr3L 19262292 19262315 11 87 10.5 10.5 10.5 1.0 109 chr3L 19262206 3` UTR Bet1 + chr3L 19262260 3` UTR,3` UTR Bet1 +,Max - chr3L 19262315 3` UTR,3` UTR Bet1 +,Max - chr3L_11_19260001 chr3L_19260001 RAL-392 1546 chr3L 19293539 19293561 chr3L 19293640 19293668 4 106 8.5 14.5 11.5 0.3 129 chr3L 19293539 intergenic not near genes chr3L 19293604 intergenic not near genes chr3L 19293668 intergenic not near genes chr3L_4_19290001 chr3L_19290001 RAL-392 1547 chr3L 19342565 19342776 chr3L 19342795 19342887 10 133 4.5 4.5 4.5 1.8 322 chr3L 19342565 3` UTR CG32206 - chr3L 19342726 3` UTR CG32206 - chr3L 19342887 3` UTR CG32206 - chr3L_10_19340001 chr3L_19340001 RAL-392 1548 chr3L 19365920 19365929 chr3L 19366015 19366046 5 107 0.0 4.5 2.2 1.6 126 chr3L 19365920 intron CG32206 - chr3L 19365983 intron CG32206 - chr3L 19366046 intron CG32206 - chr3L_5_19365001 chr3L_19365001 RAL-392 1549 chr3L 19404967 19405008 chr3L 19405052 19405090 8 87 7.0 7.0 7.0 1.0 123 chr3L 19404967 intron CG32206 - chr3L 19405028 intron CG32206 - chr3L 19405090 intron CG32206 - chr3L_8_19405001 chr3L_19405001 RAL-392 1550 chr3L 19409897 19409898 chr3L 21448026 21448026 6 2038128 8.0 14.5 11.2 0.5 2038129 chr3L 19409897 intron CG32206 - chr3L 20428962 exon CG5262 - chr3L 21448026 3` UTR Syx7 + chr3L_6_20425001 chr3L_20425001 RAL-392 1551 chr3L 19439162 19439202 chr3L 19439261 19439301 10 99 11.5 9.5 10.5 0.9 139 chr3L 19439162 intergenic not near genes chr3L 19439232 intergenic not near genes chr3L 19439301 intergenic not near genes chr3L_10_19435001 chr3L_19435001 RAL-392 1552 chr3L 19527909 19527920 chr3L 19528008 19528019 5 99 12.0 7.5 9.8 0.5 110 chr3L 19527909 intergenic not near genes chr3L 19527964 intergenic not near genes chr3L 19528019 intergenic not near genes chr3L_5_19525001 chr3L_19525001 RAL-392 1553 chr3L 19527921 19527951 chr3L 19528005 19528050 17 85 5.0 7.5 6.2 2.4 129 chr3L 19527921 intergenic not near genes chr3L 19527986 intergenic not near genes chr3L 19528050 intergenic not near genes chr3L_17_19525001 chr3L_19525001 RAL-392 1554 chr3L 19527953 19527955 chr3L 19528004 19528047 4 79 5.5 7.5 6.5 0.5 94 chr3L 19527953 intergenic not near genes chr3L 19528000 intergenic not near genes chr3L 19528047 intergenic not near genes chr3L_4_19525001 chr3L_19525001 RAL-392 1555 chr3L 19544218 19544259 chr3L 19544314 19544355 16 95 10.5 3.5 7.0 2.0 137 chr3L 19544218 intergenic CG9279 -,l(3)76BDr - chr3L 19544286 intergenic l(3)76BDr -,CG9279 - chr3L 19544355 3` UTR l(3)76BDr - chr3L_16_19540001 chr3L_19540001 RAL-392 1556 chr3L 19567557 19567591 chr3L 19567659 19567686 4 99 15.0 18.0 16.5 0.2 129 chr3L 19567557 3` UTR Shal - chr3L 19567622 3` UTR Shal - chr3L 19567686 3` UTR Shal - chr3L_4_19565001 chr3L_19565001 RAL-392 1557 chr3L 19820280 19820283 chr3L 19827849 19827852 412 4 7569 9.0 4.0 6.5 0.5 7572 chr3L 19820280 intron Deaf1 + chr3L 19824066 intron Deaf1 + chr3L 19827852 intron Deaf1 + chr3L_4_19820001 chr3L_19820001 RAL-392 1558 chr3L 19820285 19820315 chr3L 19827848 19827859 412 17 7567 3.5 3.0 3.2 4.0 7574 chr3L 19820285 intron Deaf1 + chr3L 19824072 intron Deaf1 + chr3L 19827859 intron Deaf1 + chr3L_17_19820001 chr3L_19820001 RAL-392 1559 chr3L 19845731 19845764 chr3L 19845826 19845856 5 94 18.0 17.0 17.5 0.3 125 chr3L 19845731 intron Papss + chr3L 19845794 intron Papss + chr3L 19845856 intron Papss + chr3L_5_19845001 chr3L_19845001 RAL-392 1560 chr3L 19861825 19861848 chr3L 19863608 19863615 S-element 7 1787 6.0 0.0 3.0 1.8 1790 chr3L 19861825 5` UTR CR45433 + chr3L 19862720 intergenic not near genes chr3L 19863615 intergenic not near genes chr3L_7_19860001 chr3L_19860001 RAL-392 1561 chr3L 19933528 19933561 chr3L 19934359 19934376 7 831 15.5 9.5 12.5 0.5 848 chr3L 19933528 intergenic CR45678 + chr3L 19933952 5` UTR CR45678 + chr3L 19934376 intergenic CR45678 + chr3L_7_19930001 chr3L_19930001 RAL-392 1562 chr3L 19981189 19981226 chr3L 19981289 19981326 5 100 6.5 9.5 8.0 0.6 137 chr3L 19981189 intergenic CG17732 + chr3L 19981258 intergenic CG17732 + chr3L 19981326 intergenic CG17732 + chr3L_5_19980001 chr3L_19980001 RAL-392 1563 chr3L 20033802 20033826 chr3L 20038762 20038795 6 4963 22.5 17.5 20.0 0.3 4993 chr3L 20033802 intergenic not near genes chr3L 20036298 intergenic not near genes chr3L 20038795 intergenic not near genes chr3L_6_20035001 chr3L_20035001 RAL-392 1564 chr3L 20055094 20055120 chr3L 20055466 20055497 5 373 18.0 12.5 15.2 0.3 403 chr3L 20055094 intergenic not near genes chr3L 20055296 intergenic not near genes chr3L 20055497 intergenic not near genes chr3L_5_20055001 chr3L_20055001 RAL-392 1565 chr3L 20086769 20086794 chr3L 20086867 20086872 4 93 9.5 6.0 7.8 0.5 103 chr3L 20086769 intron sNPF-R - chr3L 20086820 intron sNPF-R - chr3L 20086872 intron sNPF-R - chr3L_4_20085001 chr3L_20085001 RAL-392 1566 chr3L 20113643 20113689 chr3L 20122920 20122943 roo 6 9273 9.0 5.0 7.0 0.8 9300 chr3L 20113643 intergenic not near genes chr3L 20118293 intergenic not near genes chr3L 20122943 intergenic not near genes chr3L_6_20115001 chr3L_20115001 RAL-392 1567 chr3L 20143067 20143110 chr3L 20143164 20143187 6 96 15.0 15.0 15.0 0.4 120 chr3L 20143067 intergenic not near genes chr3L 20143127 intergenic not near genes chr3L 20143187 intergenic not near genes chr3L_6_20140001 chr3L_20140001 RAL-392 1568 chr3L 20187450 20187485 chr3L 20187549 20187578 14 96 26.0 27.5 26.8 0.5 128 chr3L 20187450 intron CG42674 - chr3L 20187514 intron CG42674 - chr3L 20187578 intron CG42674 - chr3L_14_20185001 chr3L_20185001 RAL-392 1569 chr3L 20257335 20257352 chr3L 20258475 20258481 pogo 5 1138 4.0 13.0 8.5 0.5 1146 chr3L 20257335 intron rdgC + chr3L 20257908 intron rdgC + chr3L 20258481 intron rdgC + chr3L_5_20255001 chr3L_20255001 RAL-392 1570 chr3L 20257353 20257359 chr3L 20258474 20258494 pogo 4 1132 3.5 13.0 8.2 0.4 1141 chr3L 20257353 intron rdgC + chr3L 20257924 intron rdgC + chr3L 20258494 intron rdgC + chr3L_4_20255001 chr3L_20255001 RAL-392 1571 chr3L 20386920 20386968 chr3L 20387041 20387088 8 121 1.5 3.5 2.5 2.3 168 chr3L 20386920 intron fbl + chr3L 20387004 intron fbl + chr3L 20387088 intron fbl + chr3L_8_20385001 chr3L_20385001 RAL-392 1572 chr3L 20393817 20393841 chr3L 20393915 20393945 7 102 17.0 16.5 16.8 0.4 128 chr3L 20393817 intergenic CG33969 - chr3L 20393881 intergenic CG33969 - chr3L 20393945 intergenic CG33969 - chr3L_7_20390001 chr3L_20390001 RAL-392 1573 chr3L 20402199 20402206 chr3L 20402275 20402276 4 80 7.0 2.5 4.8 0.7 77 chr3L 20402199 intergenic not near genes chr3L 20402238 intergenic not near genes chr3L 20402276 intergenic not near genes chr3L_4_20400001 chr3L_20400001 RAL-392 1574 chr3L 20402213 20402224 chr3L 20402274 20402275 6 75 4.5 2.5 3.5 1.3 62 chr3L 20402213 intergenic not near genes chr3L 20402244 intergenic not near genes chr3L 20402275 intergenic not near genes chr3L_6_20400001 chr3L_20400001 RAL-392 1575 chr3L 20403559 20403568 chr3L 20403674 20403683 6 114 18.5 7.0 12.8 0.4 124 chr3L 20403559 intergenic not near genes chr3L 20403621 intergenic not near genes chr3L 20403683 intergenic not near genes chr3L_6_20400001 chr3L_20400001 RAL-392 1576 chr3L 20403570 20403609 chr3L 20403672 20403702 21 105 5.5 7.0 6.2 2.9 132 chr3L 20403570 intergenic not near genes chr3L 20403636 intergenic not near genes chr3L 20403702 intergenic not near genes chr3L_21_20400001 chr3L_20400001 RAL-392 1577 chr3L 20447702 20447733 chr3L 20447776 20447783 5 69 6.0 2.0 4.0 1.0 81 chr3L 20447702 intron CG5910 + chr3L 20447742 intron CG5910 + chr3L 20447783 intron CG5910 + chr3L_5_20445001 chr3L_20445001 RAL-392 1578 chr3L 20476754 20476782 chr3L 20484353 20484401 springer 12 7613 2.5 5.5 4.0 2.4 7647 chr3L 20476754 3` UTR isoQC + chr3L 20480578 intergenic not near genes chr3L 20484401 3` UTR ZnT77C - chr3L_12_20480001 chr3L_20480001 RAL-392 1579 chr3L 20525229 20525229 chr3L 24821491 24821494 4 4296264 6.5 10.5 8.5 0.4 4296265 chr3L 20525229 intron CG4825 - chr3L 22673362 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_4_22670001 chr3L_22670001 RAL-392 1580 chr3L 20525230 20525230 chr3L 22908066 22908067 7 2382836 7.0 37.5 22.2 0.3 2382837 chr3L 20525230 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_7_21715001 chr3L_21715001 RAL-392 1581 chr3L 20849252 20849301 chr3L 20849351 20849393 19 97 3.5 6.5 5.0 3.2 141 chr3L 20849252 intron CG32432 - chr3L 20849322 intron CG32432 - chr3L 20849393 intron CG32432 - chr3L_19_20845001 chr3L_20845001 RAL-392 1582 chr3L 20858050 20858099 chr3L 20858169 20858218 13 117 14.5 12.0 13.2 0.9 168 chr3L 20858050 intron CG32432 - chr3L 20858134 intron CG32432 - chr3L 20858218 intron CG32432 - chr3L_13_20855001 chr3L_20855001 RAL-392 1583 chr3L 20886760 20886804 chr3L 20886901 20886939 4 140 7.0 0.0 3.5 0.9 179 chr3L 20886760 intergenic CR44686 - chr3L 20886850 intergenic CR44686 - chr3L 20886939 intergenic CR44686 - chr3L_4_20885001 chr3L_20885001 RAL-392 1584 chr3L 21082195 21082239 chr3L 21082288 21082337 8 93 4.5 4.5 4.5 1.5 142 chr3L 21082195 intron ko - chr3L 21082266 intron ko - chr3L 21082337 intron ko - chr3L_8_21080001 chr3L_21080001 RAL-392 1585 chr3L 21085567 21085606 chr3L 21085970 21086013 10 404 5.0 16.0 10.5 0.9 446 chr3L 21085567 intron ko - chr3L 21085790 intron ko - chr3L 21086013 intron ko - chr3L_10_21085001 chr3L_21085001 RAL-392 1586 chr3L 21151856 21151890 chr3L 21156950 21156987 flea 13 5100 2.5 5.0 3.8 2.7 5131 chr3L 21151856 intron Ac78C - chr3L 21154422 intron Ac78C - chr3L 21156987 intron Ac78C - chr3L_13_21150001 chr3L_21150001 RAL-392 1587 chr3L 21294817 21294863 chr3L 21294928 21294974 11 110 7.5 10.5 9.0 1.1 157 chr3L 21294817 5` UTR Cpr78Cb + chr3L 21294896 5` UTR Cpr78Cb + chr3L 21294974 5` UTR Cpr78Cb + chr3L_11_21290001 chr3L_21290001 RAL-392 1588 chr3L 21303693 21303739 chr3L 21303799 21303846 12 106 11.0 10.5 10.8 1.0 153 chr3L 21303693 intron CG11309 - chr3L 21303770 intron CG11309 - chr3L 21303846 intron CG11309 - chr3L_12_21300001 chr3L_21300001 RAL-392 1589 chr3L 21306129 21306180 chr3L 21315308 21315311 roo 13 9166 3.0 8.0 5.5 2.0 9182 chr3L 21306129 3` UTR CG7632 + chr3L 21310720 intron Pc - chr3L 21315311 3` UTR Pc - chr3L_13_21310001 chr3L_21310001 RAL-392 1590 chr3L 21319526 21319559 chr3L 21319624 21319645 7 97 15.5 13.0 14.2 0.5 119 chr3L 21319526 5` UTR Rab26 + chr3L 21319586 5` UTR Rab26 + chr3L 21319645 5` UTR Rab26 + chr3L_7_21315001 chr3L_21315001 RAL-392 1591 chr3L 21361705 21361748 chr3L 21362679 21362687 G2 8 969 11.0 6.0 8.5 0.8 982 chr3L 21361705 intergenic CG32440 + chr3L 21362196 intergenic not near genes chr3L 21362687 intergenic not near genes chr3L_8_21360001 chr3L_21360001 RAL-392 1592 chr3L 21364936 21364949 chr3L 21365032 21365059 5 105 13.0 20.0 16.5 0.3 123 chr3L 21364936 intergenic not near genes chr3L 21364998 intergenic not near genes chr3L 21365059 intergenic not near genes chr3L_5_21360001 chr3L_21360001 RAL-392 1593 chr3L 21372702 21372749 chr3L 21379229 21379277 McClintock 12 6525 6.0 5.0 5.5 1.8 6575 chr3L 21372702 intergenic not near genes chr3L 21375990 intergenic not near genes chr3L 21379277 intergenic not near genes chr3L_12_21375001 chr3L_21375001 RAL-392 1594 chr3L 4341331 4341333 chr3L 21448027 21448027 4 17106695 15.0 14.5 14.8 0.3 17106696 chr3L 4341331 intron Cip4 - chr3L 12894679 3` UTR CG14118 + chr3L 21448027 3` UTR Syx7 + chr3L_4_12890001 chr3L_12890001 RAL-392 1595 chr3L 21630593 21630638 chr3L 21630719 21630764 9 122 13.5 13.0 13.2 0.6 171 chr3L 21630593 intron MED1 - chr3L 21630678 intron MED1 - chr3L 21630764 intron MED1 - chr3L_9_21630001 chr3L_21630001 RAL-392 1596 chr3L 21656976 21657027 chr3L 21657089 21657110 5 106 10.0 11.5 10.8 0.4 134 chr3L 21656976 intron CG43980 + chr3L 21657043 intron CG43980 + chr3L 21657110 intron CG43980 + chr3L_5_21655001 chr3L_21655001 RAL-392 1597 chr3L 21766908 21766950 chr3L 21767207 21767251 10 297 16.5 15.0 15.8 0.6 343 chr3L 21766908 intron Syn1 - chr3L 21767080 intron Syn1 - chr3L 21767251 intron Syn1 - chr3L_10_21765001 chr3L_21765001 RAL-392 1598 chr3L 21769032 21769087 chr3L 21769139 21769194 10 101 13.5 16.0 14.8 0.6 162 chr3L 21769032 intron,intron Syn1 -,CG42689 + chr3L 21769113 intron,intron Syn1 -,CG42689 + chr3L 21769194 intron,intron Syn1 -,CG42689 + chr3L_10_21765001 chr3L_21765001 RAL-392 1599 chr3L 21788605 21788638 chr3L 21788710 21788741 4 99 9.0 14.0 11.5 0.3 136 chr3L 21788605 intergenic not near genes chr3L 21788673 intergenic not near genes chr3L 21788741 intergenic not near genes chr3L_4_21785001 chr3L_21785001 RAL-392 1600 chr3L 21836709 21836743 chr3L 21836815 21836848 8 101 23.0 17.0 20.0 0.4 139 chr3L 21836709 3` UTR P5CDh1 - chr3L 21836778 3` UTR P5CDh1 - chr3L 21836848 3` UTR P5CDh1 - chr3L_8_21835001 chr3L_21835001 RAL-392 1601 chr3L 21874983 21875005 chr3L 21875160 21875182 6 177 16.0 18.5 17.2 0.3 199 chr3L 21874983 intron mub + chr3L 21875082 intron mub + chr3L 21875182 intron mub + chr3L_6_21875001 chr3L_21875001 RAL-392 1602 chr3L 21875012 21875027 chr3L 21875159 21875204 4 169 17.5 18.5 18.0 0.2 192 chr3L 21875012 intron mub + chr3L 21875108 intron mub + chr3L 21875204 intron mub + chr3L_4_21875001 chr3L_21875001 RAL-392 1603 chr3L 21952450 21952476 chr3L 21953211 21953234 transib1 5 754 14.0 11.5 12.8 0.4 784 chr3L 21952450 intergenic not near genes chr3L 21952842 intergenic not near genes chr3L 21953234 intergenic not near genes chr3L_5_21950001 chr3L_21950001 RAL-392 1604 chr3L 21972521 21972531 chr3L 21972620 21972630 7 98 12.0 16.0 14.0 0.5 109 chr3L 21972521 intron CG7470 + chr3L 21972576 intron CG7470 + chr3L 21972630 intron CG7470 + chr3L_7_21970001 chr3L_21970001 RAL-392 1605 chr3L 21972535 21972553 chr3L 21972603 21972652 4 91 12.5 13.5 13.0 0.3 117 chr3L 21972535 intron CG7470 + chr3L 21972594 intron CG7470 + chr3L 21972652 intron CG7470 + chr3L_4_21970001 chr3L_21970001 RAL-392 1606 chr3L 22046172 22046213 chr3L 22046284 22046327 9 116 20.0 20.5 20.2 0.4 155 chr3L 22046172 intron Oct-TyrR + chr3L 22046250 intron Oct-TyrR + chr3L 22046327 intron Oct-TyrR + chr3L_9_22045001 chr3L_22045001 RAL-392 1607 chr3L 22099675 22099680 chr3L 22105875 22105886 3S18 6 6205 9.0 6.5 7.8 0.7 6211 chr3L 22099675 intergenic not near genes chr3L 22102780 intergenic not near genes chr3L 22105886 intergenic not near genes chr3L_6_22100001 chr3L_22100001 RAL-392 1608 chr3L 22099682 22099705 chr3L 22105863 22105911 3S18 9 6198 3.0 5.5 4.2 1.7 6229 chr3L 22099682 intergenic not near genes chr3L 22102796 intergenic not near genes chr3L 22105911 intergenic not near genes chr3L_9_22100001 chr3L_22100001 RAL-392 1609 chr3L 22107663 22107709 chr3L 22107861 22107901 8 192 8.5 14.5 11.5 0.6 238 chr3L 22107663 intergenic not near genes chr3L 22107782 intergenic not near genes chr3L 22107901 intergenic not near genes chr3L_8_22105001 chr3L_22105001 RAL-392 1610 chr3L 22130481 22130521 chr3L 22130647 22130687 12 166 7.5 7.0 7.2 1.5 206 chr3L 22130481 intergenic not near genes chr3L 22130584 intergenic not near genes chr3L 22130687 intergenic not near genes chr3L_12_22130001 chr3L_22130001 RAL-392 1611 chr3L 22137515 22137678 chr3L 22137598 22137785 8 94 5.0 13.0 9.0 0.8 270 chr3L 22137515 intron olf413 + chr3L 22137650 intron olf413 + chr3L 22137785 intron olf413 + chr3L_8_22135001 chr3L_22135001 RAL-392 1612 chr3L 22166445 22166458 chr3L 22166527 22166546 4 88 7.0 9.5 8.2 0.4 101 chr3L 22166445 intron olf413 + chr3L 22166496 intron olf413 + chr3L 22166546 intron olf413 + chr3L_4_22165001 chr3L_22165001 RAL-392 1613 chr3L 22169470 22169489 chr3L 22169577 22169602 4 109 12.5 13.0 12.8 0.3 132 chr3L 22169470 intron olf413 + chr3L 22169536 intron olf413 + chr3L 22169602 intron olf413 + chr3L_4_22165001 chr3L_22165001 RAL-392 1614 chr3L 22227685 22227686 chr3L 22227843 22227843 4 166 7.0 16.5 11.8 0.3 158 chr3L 22227685 intron olf413 + chr3L 22227764 intron olf413 + chr3L 22227843 intron olf413 + chr3L_4_22225001 chr3L_22225001 RAL-392 1615 chr3L 22351146 22351154 chr3L 22351230 22351249 4 91 11.0 7.5 9.2 0.4 103 chr3L 22351146 intron Ten-m - chr3L 22351198 intron Ten-m - chr3L 22351249 intron Ten-m - chr3L_4_22350001 chr3L_22350001 RAL-392 1616 chr3L 22447180 22447231 chr3L 22447291 22447342 18 107 2.0 3.5 2.8 4.7 162 chr3L 22447180 intergenic not near genes chr3L 22447261 intergenic not near genes chr3L 22447342 intergenic not near genes chr3L_18_22445001 chr3L_22445001 RAL-392 1617 chr3L 22461533 22461592 chr3L 22461647 22461680 4 106 8.5 11.0 9.8 0.4 147 chr3L 22461533 intergenic laza - chr3L 22461606 intergenic laza - chr3L 22461680 intergenic not near genes chr3L_4_22460001 chr3L_22460001 RAL-392 1618 chr3L 22522682 22522696 chr3L 22522779 22522793 5 97 9.0 2.5 5.8 0.7 111 chr3L 22522682 intergenic not near genes chr3L 22522738 intergenic not near genes chr3L 22522793 intergenic not near genes chr3L_5_22520001 chr3L_22520001 RAL-392 1619 chr3L 22522698 22522724 chr3L 22522775 22522821 15 94 6.5 2.0 4.2 2.9 123 chr3L 22522698 intergenic not near genes chr3L 22522760 intergenic not near genes chr3L 22522821 intergenic not near genes chr3L_15_22520001 chr3L_22520001 RAL-392 1620 chr3L 22555762 22555789 chr3L 22563239 22563260 blood 6 7478 4.5 4.0 4.2 1.2 7498 chr3L 22555762 intergenic not near genes chr3L 22559511 intergenic not near genes chr3L 22563260 intergenic not near genes chr3L_6_22555001 chr3L_22555001 RAL-392 1621 chr3L 22577625 22577645 chr3L 22582413 22582432 Doc 5 4800 2.0 6.0 4.0 1.0 4807 chr3L 22577625 intergenic not near genes chr3L 22580028 intergenic not near genes chr3L 22582432 3` UTR CG14459 - chr3L_5_22580001 chr3L_22580001 RAL-392 1622 chr3L 22603927 22603949 chr3L 22604004 22604051 8 93 9.0 10.5 9.8 0.7 124 chr3L 22603927 intron CG14459 - chr3L 22603989 intron CG14459 - chr3L 22604051 intron CG14459 - chr3L_8_22600001 chr3L_22600001 RAL-392 1623 chr3L 22611482 22611509 chr3L 22611615 22611642 5 130 9.0 7.5 8.2 0.5 160 chr3L 22611482 intron CG14459 - chr3L 22611562 intron CG14459 - chr3L 22611642 intron CG14459 - chr3L_5_22610001 chr3L_22610001 RAL-392 1624 chr3L 22617192 22617195 chr3L 22624648 22624667 blood 4 7465 7.5 7.0 7.2 0.5 7475 chr3L 22617192 intron CG14459 - chr3L 22620930 intron CG14459 - chr3L 22624667 intron CG14459 - chr3L_4_22620001 chr3L_22620001 RAL-392 1625 chr3L 22761372 22761412 chr3L 22766826 22766860 Ivk 18 5449 15.5 12.0 13.8 1.2 5488 chr3L 22761372 intron SPoCk + chr3L 22764116 intron SPoCk + chr3L 22766860 intron SPoCk + chr3L_18_22760001 chr3L_22760001 RAL-392 1626 chr3L 22786065 22786088 chr3L 22788497 22788534 9 2444 32.0 36.5 34.2 0.3 2469 chr3L 22786065 3` UTR SPoCk + chr3L 22787300 3` UTR SPoCk + chr3L 22788534 exon CG14448 + chr3L_9_22785001 chr3L_22785001 RAL-392 1627 chr3L 22844321 22844368 chr3L 22844571 22844618 10 247 11.0 9.5 10.2 0.9 297 chr3L 22844321 intergenic not near genes chr3L 22844470 intergenic not near genes chr3L 22844618 intergenic not near genes chr3L_10_22840001 chr3L_22840001 RAL-392 1628 chr3L 22853469 22853722 chr3L 22853551 22853793 21 95 3.5 5.0 4.2 4.0 324 chr3L 22853469 5` UTR,5` UTR CR43426 +,CG32462 - chr3L 22853631 5` UTR CR43426 + chr3L 22853793 5` UTR CR43426 + chr3L_21_22850001 chr3L_22850001 RAL-392 1629 chr3L 22865969 22866012 chr3L 22867122 22867154 Doc 14 1143 5.0 7.5 6.2 1.9 1185 chr3L 22865969 intron CG33170 + chr3L 22866562 intron CG33170 + chr3L 22867154 intron CG33170 + chr3L_14_22865001 chr3L_22865001 RAL-392 1630 chr3L 22897186 22897225 chr3L 22897278 22897294 6 90 13.5 13.5 13.5 0.4 108 chr3L 22897186 intergenic not near genes chr3L 22897240 intergenic not near genes chr3L 22897294 intergenic not near genes chr3L_6_22895001 chr3L_22895001 RAL-392 1631 chr3L 20525229 20525229 chr3L 22908066 22908066 10 2382837 6.5 37.5 22.0 0.4 2382837 chr3L 20525229 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908066 intergenic not near genes chr3L_10_21715001 chr3L_21715001 RAL-392 1632 chr3L 22908066 22908066 chr3L 24821492 24821494 8 1913427 37.5 11.5 24.5 0.3 1913428 chr3L 22908066 intergenic not near genes chr3L 23864780 intron CG40470 - chr3L 24821494 intergenic not near genes chr3L_8_23860001 chr3L_23860001 RAL-392 1633 chr3L 20525229 20525230 chr3L 22908067 22908067 6 2382837 7.0 37.5 22.2 0.3 2382838 chr3L 20525229 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_6_21715001 chr3L_21715001 RAL-392 1634 chr3L 22908067 22908067 chr3L 24821491 24821496 5 1913427 38.0 10.5 24.2 0.2 1913429 chr3L 22908067 intergenic not near genes chr3L 23864782 intron CG40470 - chr3L 24821496 intergenic not near genes chr3L_5_23860001 chr3L_23860001 RAL-392 1635 chr3L 22912748 22912792 chr3L 22912849 22912883 10 99 8.5 10.0 9.2 1.0 135 chr3L 22912748 intron CG12768 + chr3L 22912816 intron CG12768 + chr3L 22912883 intron CG12768 + chr3L_10_22910001 chr3L_22910001 RAL-392 1636 chr3L 22915160 22915201 chr3L 22915286 22915328 10 125 9.5 13.0 11.2 0.8 168 chr3L 22915160 intron CG12768 + chr3L 22915244 intron CG12768 + chr3L 22915328 intron CG12768 + chr3L_10_22915001 chr3L_22915001 RAL-392 1637 chr3L 22949187 22949221 chr3L 22949286 22949329 4 104 6.5 6.5 6.5 0.5 142 chr3L 22949187 intron Mes2 + chr3L 22949258 intron Mes2 + chr3L 22949329 intron Mes2 + chr3L_4_22945001 chr3L_22945001 RAL-392 1638 chr3L 22955367 22955414 chr3L 22956680 22956727 INE-1 4 1313 11.0 4.5 7.8 0.5 1360 chr3L 22955367 intergenic CG32461 - chr3L 22956047 intergenic not near genes chr3L 22956727 intergenic not near genes chr3L_4_22955001 chr3L_22955001 RAL-392 1639 chr3L 22984019 22984072 chr3L 22984125 22984153 5 95 10.0 11.5 10.8 0.4 134 chr3L 22984019 intergenic not near genes chr3L 22984086 intergenic not near genes chr3L 22984153 intergenic not near genes chr3L_5_22980001 chr3L_22980001 RAL-392 1640 chr3L 22985322 22985332 chr3L 22985389 22985411 5 83 13.0 18.0 15.5 0.3 89 chr3L 22985322 intergenic not near genes chr3L 22985366 intergenic not near genes chr3L 22985411 intergenic not near genes chr3L_5_22985001 chr3L_22985001 RAL-392 1641 chr3L 22989873 22989894 chr3L 22996837 22996870 297 11 6972 1.5 7.0 4.2 2.1 6997 chr3L 22989873 intergenic not near genes chr3L 22993372 intergenic not near genes chr3L 22996870 intergenic not near genes chr3L_11_22990001 chr3L_22990001 RAL-392 1642 chr3L 23035852 23035899 chr3L 23036763 23036798 INE-1 10 909 14.0 7.0 10.5 0.9 946 chr3L 23035852 intron nrm + chr3L 23036325 intron nrm + chr3L 23036798 intron nrm + chr3L_10_23035001 chr3L_23035001 RAL-392 1643 chr3L 23213275 23213305 chr3L 23213652 23213682 5 374 16.0 7.5 11.8 0.4 407 chr3L 23213275 intron nAChRalpha4 + chr3L 23213478 intron nAChRalpha4 + chr3L 23213682 intron nAChRalpha4 + chr3L_5_23210001 chr3L_23210001 RAL-392 1644 chr3L 23277212 23277259 chr3L 23277318 23277364 6 106 7.0 9.0 8.0 0.7 152 chr3L 23277212 intron nAChRalpha4 + chr3L 23277288 intron nAChRalpha4 + chr3L 23277364 intron nAChRalpha4 + chr3L_6_23275001 chr3L_23275001 RAL-392 1645 chr3L 23288265 23288297 chr3L 23288964 23288996 INE-1 6 696 18.5 15.0 16.8 0.3 731 chr3L 23288265 intergenic not near genes chr3L 23288630 intergenic not near genes chr3L 23288996 intergenic not near genes chr3L_6_23285001 chr3L_23285001 RAL-392 1646 chr3L 23848826 23848832 chr3L 23849665 23849669 R1A1-element 4 841 4.0 14.5 9.2 0.4 843 chr3L 23848826 intron CG40470 - chr3L 23849248 intron CG40470 - chr3L 23849669 intron CG40470 - chr3L_4_23845001 chr3L_23845001 RAL-392 1647 chr3L 23909129 23909166 chr3L 23912259 23912296 G3 9 3133 30.0 24.5 27.2 0.3 3167 chr3L 23909129 intron,5` UTR CG40470 -,CR43942 + chr3L 23910712 intron CG40470 - chr3L 23912296 exon CG40470 - chr3L_9_23910001 chr3L_23910001 RAL-392 1648 chr3L 24012402 24012439 chr3L 24020745 24020772 roo 7 8343 2.5 5.5 4.0 1.4 8370 chr3L 24012402 intergenic not near genes chr3L 24016587 intergenic not near genes chr3L 24020772 intergenic not near genes chr3L_7_24015001 chr3L_24015001 RAL-392 1649 chr3L 24021296 24021313 chr3L 24022444 24022474 1360 8 1163 7.0 7.0 7.0 1.0 1178 chr3L 24021296 intergenic not near genes chr3L 24021885 intergenic not near genes chr3L 24022474 intergenic not near genes chr3L_8_24020001 chr3L_24020001 RAL-392 1650 chr3L 24363251 24363263 chr3L 24363317 24363347 7 72 11.5 9.5 10.5 0.6 96 chr3L 24363251 intron nvd + chr3L 24363299 intron nvd + chr3L 24363347 intron nvd + chr3L_7_24360001 chr3L_24360001 RAL-392 1651 chr3L 24730935 24730967 chr3L 24731029 24731068 8 105 7.5 11.0 9.2 0.8 133 chr3L 24730935 intron scro + chr3L 24731002 intron scro + chr3L 24731068 intron scro + chr3L_8_24730001 chr3L_24730001 RAL-392 1652 chr3L 20525228 20525230 chr3L 24821492 24821492 8 4296263 7.0 11.5 9.2 0.8 4296264 chr3L 20525228 intron CG4825 - chr3L 22673360 intron CG14457 + chr3L 24821492 intergenic not near genes chr3L_8_22670001 chr3L_22670001 RAL-392 1653 chr3L 18198931 18198931 chr3L 24821493 24821493 4 6622562 4.0 11.5 7.8 0.5 6622562 chr3L 18198931 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821493 intergenic not near genes chr3L_4_21510001 chr3L_21510001 RAL-392 1654 chr3L 23289012 23289042 chr3L 25843673 25843703 6 2554661 28.0 18.5 23.2 0.2 2554691 chr3L 23289012 intergenic not near genes chr3L 24566358 intergenic not near genes chr3L 25843703 intron CG40178 - chr3L_6_24565001 chr3L_24565001 RAL-392 1655 chr3L 26008745 26008793 chr3L 26008910 26008925 4 150 10.5 6.5 8.5 0.4 180 chr3L 26008745 intron CG40178 - chr3L 26008835 intron CG40178 - chr3L 26008925 intron CG40178 - chr3L_4_26005001 chr3L_26005001 RAL-392 1656 chr3L 26009453 26009454 chr3L 26009520 26009555 4 88 5.5 6.0 5.8 0.6 102 chr3L 26009453 intron CG40178 - chr3L 26009504 intron CG40178 - chr3L 26009555 intron CG40178 - chr3L_4_26005001 chr3L_26005001 RAL-392 1657 chr3L 26694914 26694954 chr3L 26695014 26695054 6 99 10.5 8.5 9.5 0.6 140 chr3L 26694914 intergenic not near genes chr3L 26694984 intergenic not near genes chr3L 26695054 intergenic not near genes chr3L_6_26690001 chr3L_26690001 RAL-392 1658 chr3L 27390700 27390707 chr3L 27390776 27390806 4 92 29.5 33.0 31.2 0.1 106 chr3L 27390700 intron Dbp80 + chr3L 27390753 intron Dbp80 + chr3L 27390806 intron Dbp80 + chr3L_4_27390001 chr3L_27390001 RAL-392 1659 chr3L 27390708 27390712 chr3L 27390771 27390786 4 72 30.0 34.0 32.0 0.1 78 chr3L 27390708 intron Dbp80 + chr3L 27390747 intron Dbp80 + chr3L 27390786 intron Dbp80 + chr3L_4_27390001 chr3L_27390001 RAL-392 1660 chr3L 27980681 27980728 chr3L 27985499 27985525 Doc 6 4814 11.5 5.0 8.2 0.7 4844 chr3L 27980681 intron CG17514 - chr3L 27983103 intron CG17514 - chr3L 27985525 intron CG17514 - chr3L_6_27980001 chr3L_27980001 RAL-392 1661 chr3R 97110 97112 chr3R 99846 99848 9 2736 12.5 16.0 14.2 0.6 2738 chr3R 97110 intergenic not near genes chr3R 98479 intergenic not near genes chr3R 99848 intergenic not near genes chr3R_9_95001 chr3R_95001 RAL-392 1662 chr3R 1062377 1062415 chr3R 1062555 1062593 12 173 10.0 6.5 8.2 1.3 216 chr3R 1062377 intron CG15831 + chr3R 1062485 intron CG15831 + chr3R 1062593 intron CG15831 + chr3R_12_1060001 chr3R_1060001 RAL-392 1663 chr3R 1443441 1443446 chr3R 1443507 1443527 4 75 8.5 8.0 8.2 0.4 86 chr3R 1443441 intron CG40155 + chr3R 1443484 intron CG40155 + chr3R 1443527 intron CG40155 + chr3R_4_1440001 chr3R_1440001 RAL-392 1664 chr3R 1850868 1850906 chr3R 1853515 1853530 INE-1 4 2641 6.5 8.0 7.2 0.5 2662 chr3R 1850868 intron CG42623 + chr3R 1852199 intron CG42623 + chr3R 1853530 intron CG42623 + chr3R_4_1850001 chr3R_1850001 RAL-392 1665 chr3R 1939050 1939082 chr3R 1939148 1939196 6 107 4.0 6.0 5.0 1.0 146 chr3R 1939050 intergenic not near genes chr3R 1939123 intergenic not near genes chr3R 1939196 intergenic not near genes chr3R_6_1935001 chr3R_1935001 RAL-392 1666 chr3R 2534134 2534157 chr3R 2541717 2541746 6 7584 17.5 17.0 17.2 0.3 7612 chr3R 2534134 intergenic not near genes chr3R 2537940 intergenic not near genes chr3R 2541746 intergenic not near genes chr3R_6_2535001 chr3R_2535001 RAL-392 1667 chr3R 2556882 2556921 chr3R 2557595 2557634 5 717 26.5 17.0 21.8 0.2 752 chr3R 2556882 intron CG41056 - chr3R 2557258 intron CG41056 - chr3R 2557634 intron CG41056 - chr3R_5_2555001 chr3R_2555001 RAL-392 1668 chr3R 4105021 4105062 chr3R 4110245 4110251 copia 6 5215 3.0 4.0 3.5 1.3 5230 chr3R 4105021 intergenic not near genes chr3R 4107636 intergenic not near genes chr3R 4110251 intergenic not near genes chr3R_6_4105001 chr3R_4105001 RAL-392 1669 chr3R 4206056 4206103 chr3R 4211645 4211698 mdg3 14 5588 4.5 1.5 3.0 3.5 5642 chr3R 4206056 intron CG14636 - chr3R 4208877 intron CG14636 - chr3R 4211698 intron CG14636 - chr3R_14_4205001 chr3R_4205001 RAL-392 1670 chr3R 4357567 4357578 chr3R 4357706 4357717 4 139 12.5 21.0 16.8 0.2 150 chr3R 4357567 intergenic not near genes chr3R 4357642 intergenic not near genes chr3R 4357717 intergenic not near genes chr3R_4_4355001 chr3R_4355001 RAL-392 1671 chr3R 4366741 4366754 chr3R 4375144 4375150 roo 8 8402 16.0 5.5 10.8 0.7 8409 chr3R 4366741 3` UTR CG1090 + chr3R 4370946 intergenic not near genes chr3R 4375150 5` UTR CR44922 + chr3R_8_4370001 chr3R_4370001 RAL-392 1672 chr3R 4366757 4366765 chr3R 4375140 4375168 roo 4 8398 11.5 4.5 8.0 0.4 8411 chr3R 4366757 3` UTR CG1090 + chr3R 4370962 intergenic not near genes chr3R 4375168 5` UTR CR44922 + chr3R_4_4370001 chr3R_4370001 RAL-392 1673 chr3R 4366774 4366789 chr3R 4375138 4375142 roo 5 8369 7.0 3.5 5.2 0.8 8368 chr3R 4366774 3` UTR CG1090 + chr3R 4370958 intergenic not near genes chr3R 4375142 5` UTR CR44922 + chr3R_5_4370001 chr3R_4370001 RAL-392 1674 chr3R 4408418 4408439 chr3R 4412712 4412739 Juan 11 4308 9.0 9.0 9.0 1.1 4321 chr3R 4408418 intron CG32944 - chr3R 4410578 intron CG32944 - chr3R 4412739 intron CG32944 - chr3R_11_4410001 chr3R_4410001 RAL-392 1675 chr3R 4420597 4420656 chr3R 4420653 4420741 10 113 8.5 9.0 8.8 1.0 144 chr3R 4420597 intergenic not near genes chr3R 4420669 intergenic not near genes chr3R 4420741 intergenic not near genes chr3R_10_4420001 chr3R_4420001 RAL-392 1676 chr3R 4609536 4609581 chr3R 4610709 4610746 1360 13 1174 7.0 5.5 6.2 1.8 1210 chr3R 4609536 intergenic not near genes chr3R 4610141 intergenic not near genes chr3R 4610746 intergenic not near genes chr3R_13_4610001 chr3R_4610001 RAL-392 1677 chr3R 4658029 4658061 chr3R 4658121 4658138 5 77 12.0 11.0 11.5 0.4 109 chr3R 4658029 intergenic spartin + chr3R 4658084 intergenic spartin + chr3R 4658138 intergenic spartin + chr3R_5_4655001 chr3R_4655001 RAL-392 1678 chr3R 4683169 4683202 chr3R 4684948 4684981 S-element 9 1776 7.5 2.5 5.0 1.5 1812 chr3R 4683169 intron CG43427 + chr3R 4684075 intron CG43427 + chr3R 4684981 intron CG43427 + chr3R_9_4680001 chr3R_4680001 RAL-392 1679 chr3R 4753241 4753270 chr3R 4757553 4757553 F-element 7 4302 3.5 3.5 3.5 1.6 4312 chr3R 4753241 intron,intron atms +,CG44098 - chr3R 4755397 intron,intron atms +,CG44098 - chr3R 4757553 intron,exon atms +,CG44098 - chr3R_7_4755001 chr3R_4755001 RAL-392 1680 chr3R 4759731 4759735 chr3R 4761212 4761215 hopper2 4 1493 6.5 13.0 9.8 0.4 1484 chr3R 4759731 intron,intron atms +,CG44098 - chr3R 4760473 intron,intron atms +,CG44098 - chr3R 4761215 intron,intron atms +,CG44098 - chr3R_4_4760001 chr3R_4760001 RAL-392 1681 chr3R 4769157 4769177 chr3R 4769255 4769275 4 98 7.0 7.0 7.0 0.5 118 chr3R 4769157 intron,intron atms +,CG44098 - chr3R 4769216 intron,intron atms +,CG44098 - chr3R 4769275 intron,intron atms +,CG44098 - chr3R_4_4765001 chr3R_4765001 RAL-392 1682 chr3R 4796118 4796147 chr3R 4796256 4796280 5 131 11.0 12.0 11.5 0.4 162 chr3R 4796118 intron ctrip - chr3R 4796199 intron ctrip - chr3R 4796280 intron ctrip - chr3R_5_4795001 chr3R_4795001 RAL-392 1683 chr3R 4861555 4861597 chr3R 4861656 4861677 6 85 5.5 7.0 6.2 0.8 122 chr3R 4861555 intron opa + chr3R 4861616 intron opa + chr3R 4861677 intron opa + chr3R_6_4860001 chr3R_4860001 RAL-392 1684 chr3R 4896282 4896313 chr3R 4896395 4896426 9 110 10.5 10.5 10.5 0.8 144 chr3R 4896282 intergenic CR45580 + chr3R 4896354 intergenic CR45580 + chr3R 4896426 5` UTR CR45580 + chr3R_9_4895001 chr3R_4895001 RAL-392 1685 chr3R 4984284 4984311 chr3R 4984396 4984406 5 108 16.5 20.5 18.5 0.3 122 chr3R 4984284 intergenic CG14662 -,CR43424 -,CR43478 + chr3R 4984345 intergenic CG14662 -,CR43424 -,CR43478 + chr3R 4984406 intergenic CR43424 -,CG14662 - chr3R_5_4980001 chr3R_4980001 RAL-392 1686 chr3R 5045826 5045870 chr3R 5052948 5052992 HMS-Beagle 15 7121 6.0 6.0 6.0 2.1 7166 chr3R 5045826 3` UTR CR43635 - chr3R 5049409 intergenic not near genes chr3R 5052992 intergenic CR45588 - chr3R_15_5045001 chr3R_5045001 RAL-392 1687 chr3R 5067976 5067980 chr3R 5073513 5073517 mdg3 4 5537 17.0 17.5 17.2 0.2 5541 chr3R 5067976 intergenic not near genes chr3R 5070746 intergenic not near genes chr3R 5073517 intergenic not near genes chr3R_4_5070001 chr3R_5070001 RAL-392 1688 chr3R 5067983 5068012 chr3R 5073498 5073549 mdg3 16 5534 6.0 13.5 9.8 1.5 5566 chr3R 5067983 intergenic not near genes chr3R 5070766 intergenic not near genes chr3R 5073549 intergenic not near genes chr3R_16_5070001 chr3R_5070001 RAL-392 1689 chr3R 5142299 5142316 chr3R 5142397 5142418 5 101 17.0 15.0 16.0 0.3 119 chr3R 5142299 intergenic not near genes chr3R 5142358 intergenic not near genes chr3R 5142418 intergenic not near genes chr3R_5_5140001 chr3R_5140001 RAL-392 1690 chr3R 5158131 5158176 chr3R 5158244 5158274 6 110 22.0 20.0 21.0 0.3 143 chr3R 5158131 intron dpr16 + chr3R 5158202 intron dpr16 + chr3R 5158274 intron dpr16 + chr3R_6_5155001 chr3R_5155001 RAL-392 1691 chr3R 5162924 5162969 chr3R 5163091 5163111 9 165 10.5 18.0 14.2 0.6 187 chr3R 5162924 intron dpr16 + chr3R 5163018 intron dpr16 + chr3R 5163111 intron dpr16 + chr3R_9_5160001 chr3R_5160001 RAL-392 1692 chr3R 5236200 5236244 chr3R 5236348 5236365 6 139 13.5 5.0 9.2 0.6 165 chr3R 5236200 3` UTR,3` UTR Mms19 +,rtp - chr3R 5236282 3` UTR,3` UTR Mms19 +,rtp - chr3R 5236365 3` UTR rtp - chr3R_6_5235001 chr3R_5235001 RAL-392 1693 chr3R 5250867 5250916 chr3R 5250994 5251046 9 124 4.5 12.0 8.2 1.0 179 chr3R 5250867 intron CG12163 - chr3R 5250956 intron CG12163 - chr3R 5251046 intron CG12163 - chr3R_9_5250001 chr3R_5250001 RAL-392 1694 chr3R 5278075 5278118 chr3R 5278169 5278219 10 95 1.0 5.0 3.0 2.5 144 chr3R 5278075 intron mtd - chr3R 5278147 intron mtd - chr3R 5278219 intron mtd - chr3R_10_5275001 chr3R_5275001 RAL-392 1695 chr3R 5306134 5306162 chr3R 5306216 5306254 4 77 14.0 12.0 13.0 0.3 120 chr3R 5306134 intron mtd - chr3R 5306194 intron mtd - chr3R 5306254 intron mtd - chr3R_4_5305001 chr3R_5305001 RAL-392 1696 chr3R 5338383 5338410 chr3R 5343580 5343584 Rt1c 12 5194 18.0 11.0 14.5 0.8 5201 chr3R 5338383 intron mtd - chr3R 5340984 intron mtd - chr3R 5343584 intron mtd - chr3R_12_5340001 chr3R_5340001 RAL-392 1697 chr3R 5338411 5338422 chr3R 5343574 5343619 Rt1c 6 5187 11.5 9.5 10.5 0.5 5208 chr3R 5338411 intron mtd - chr3R 5341015 intron mtd - chr3R 5343619 intron mtd - chr3R_6_5340001 chr3R_5340001 RAL-392 1698 chr3R 5338423 5338429 chr3R 5343570 5343596 Rt1c 4 5163 9.0 8.0 8.5 0.4 5173 chr3R 5338423 intron mtd - chr3R 5341010 intron mtd - chr3R 5343596 intron mtd - chr3R_4_5340001 chr3R_5340001 RAL-392 1699 chr3R 5445941 5445993 chr3R 5452421 5452473 Burdock 19 6477 3.0 3.0 3.0 4.8 6532 chr3R 5445941 intron CG14669 + chr3R 5449207 intron CG14669 + chr3R 5452473 intron CG14669 + chr3R_19_5445001 chr3R_5445001 RAL-392 1700 chr3R 5698099 5698146 chr3R 5698213 5698221 5 105 8.0 19.0 13.5 0.3 122 chr3R 5698099 intron plx + chr3R 5698160 intron plx + chr3R 5698221 intron plx + chr3R_5_5695001 chr3R_5695001 RAL-392 1701 chr3R 5726076 5726081 chr3R 5726258 5726263 4 182 24.0 11.5 17.8 0.2 187 chr3R 5726076 intergenic not near genes chr3R 5726170 intergenic not near genes chr3R 5726263 intergenic not near genes chr3R_4_5725001 chr3R_5725001 RAL-392 1702 chr3R 5726086 5726115 chr3R 5726253 5726297 7 174 23.0 12.5 17.8 0.4 211 chr3R 5726086 intergenic not near genes chr3R 5726192 intergenic not near genes chr3R 5726297 intergenic not near genes chr3R_7_5725001 chr3R_5725001 RAL-392 1703 chr3R 5735578 5735597 chr3R 5736980 5737020 8 1410 26.5 20.0 23.2 0.3 1442 chr3R 5735578 exon CG2100 - chr3R 5736299 5` UTR CG2100 - chr3R 5737020 exon CG1236 + chr3R_8_5735001 chr3R_5735001 RAL-392 1704 chr3R 5746014 5746024 chr3R 5746266 5746285 pogo 5 259 2.5 10.5 6.5 0.7 271 chr3R 5746014 3` UTR Madm + chr3R 5746150 3` UTR Madm + chr3R 5746285 3` UTR Madm + chr3R_5_5745001 chr3R_5745001 RAL-392 1705 chr3R 5746030 5746042 chr3R 5746255 5746303 pogo 4 241 1.5 4.5 3.0 1.0 273 chr3R 5746030 3` UTR Madm + chr3R 5746166 3` UTR Madm + chr3R 5746303 3` UTR Madm + chr3R_4_5745001 chr3R_5745001 RAL-392 1706 chr3R 5746996 5747007 chr3R 5753207 5753217 diver 5 6210 20.5 5.5 13.0 0.4 6221 chr3R 5746996 intergenic Madm + chr3R 5750106 intergenic not near genes chr3R 5753217 intergenic CG2091 - chr3R_5_5750001 chr3R_5750001 RAL-392 1707 chr3R 5747015 5747037 chr3R 5753205 5753247 diver 11 6200 11.0 5.0 8.0 1.2 6232 chr3R 5747015 intergenic Madm + chr3R 5750131 intergenic not near genes chr3R 5753247 intergenic CG2091 - chr3R_11_5750001 chr3R_5750001 RAL-392 1708 chr3R 5769219 5769246 chr3R 5769331 5769345 6 113 6.0 5.0 5.5 0.9 126 chr3R 5769219 intron CG2082 - chr3R 5769282 intron CG2082 - chr3R 5769345 intron CG2082 - chr3R_6_5765001 chr3R_5765001 RAL-392 1709 chr3R 5822362 5822413 chr3R 5823549 5823583 1360 18 1179 4.0 5.0 4.5 3.3 1221 chr3R 5822362 3` UTR CG2023 - chr3R 5822972 3` UTR CG2023 - chr3R 5823583 3` UTR CG2023 - chr3R_18_5820001 chr3R_5820001 RAL-392 1710 chr3R 5927546 5927582 chr3R 5927801 5927804 pogo 7 252 7.5 5.5 6.5 0.9 258 chr3R 5927546 intron CG34113 - chr3R 5927675 intron CG34113 - chr3R 5927804 intron CG34113 - chr3R_7_5925001 chr3R_5925001 RAL-392 1711 chr3R 6012641 6012679 chr3R 6012739 6012777 12 97 22.5 30.0 26.2 0.4 136 chr3R 6012641 intergenic not near genes chr3R 6012709 intergenic not near genes chr3R 6012777 intergenic not near genes chr3R_12_6010001 chr3R_6010001 RAL-392 1712 chr3R 6015963 6015977 chr3R 6024449 6024457 Tirant 4 8485 3.5 0.5 2.0 1.3 8494 chr3R 6015963 intergenic not near genes chr3R 6020210 intergenic not near genes chr3R 6024457 intergenic not near genes chr3R_4_6020001 chr3R_6020001 RAL-392 1713 chr3R 6048434 6048468 chr3R 6048532 6048551 9 93 15.5 10.0 12.8 0.7 117 chr3R 6048434 intergenic not near genes chr3R 6048492 intergenic not near genes chr3R 6048551 intergenic not near genes chr3R_9_6045001 chr3R_6045001 RAL-392 1714 chr3R 6080151 6080175 chr3R 6080240 6080286 4 92 10.0 11.0 10.5 0.3 135 chr3R 6080151 intergenic not near genes chr3R 6080218 intergenic not near genes chr3R 6080286 intergenic not near genes chr3R_4_6080001 chr3R_6080001 RAL-392 1715 chr3R 6117411 6117443 chr3R 6117547 6117549 4 116 6.5 12.5 9.5 0.4 138 chr3R 6117411 intergenic not near genes chr3R 6117480 intergenic not near genes chr3R 6117549 intergenic not near genes chr3R_4_6115001 chr3R_6115001 RAL-392 1716 chr3R 6119112 6119151 chr3R 6119218 6119257 6 103 7.0 7.0 7.0 0.8 145 chr3R 6119112 intergenic not near genes chr3R 6119184 intergenic not near genes chr3R 6119257 intergenic not near genes chr3R_6_6115001 chr3R_6115001 RAL-392 1717 chr3R 6121164 6121178 chr3R 6121402 6121407 BS 5 235 0.0 9.5 4.8 0.9 243 chr3R 6121164 intergenic not near genes chr3R 6121286 intergenic not near genes chr3R 6121407 intergenic not near genes chr3R_5_6120001 chr3R_6120001 RAL-392 1718 chr3R 6158058 6158104 chr3R 6158292 6158338 12 234 9.5 15.5 12.5 0.9 280 chr3R 6158058 intergenic not near genes chr3R 6158198 intergenic not near genes chr3R 6158338 intergenic not near genes chr3R_12_6155001 chr3R_6155001 RAL-392 1719 chr3R 6175151 6175205 chr3R 6182443 6182469 HMS-Beagle2 17 7287 2.5 3.0 2.8 4.5 7318 chr3R 6175151 intergenic Osi1 + chr3R 6178810 intron CR45194 + chr3R 6182469 intergenic CR45194 + chr3R_17_6175001 chr3R_6175001 RAL-392 1720 chr3R 6191162 6191178 chr3R 6191252 6191267 6 96 5.5 9.0 7.2 0.7 105 chr3R 6191162 intron NPFR + chr3R 6191214 intron NPFR + chr3R 6191267 intron NPFR + chr3R_6_6190001 chr3R_6190001 RAL-392 1721 chr3R 6191183 6191198 chr3R 6191247 6191298 6 89 2.5 6.5 4.5 1.1 115 chr3R 6191183 intron NPFR + chr3R 6191240 intron NPFR + chr3R 6191298 intron NPFR + chr3R_6_6190001 chr3R_6190001 RAL-392 1722 chr3R 6206298 6206315 chr3R 6206497 6206525 BS 5 203 9.0 8.5 8.8 0.5 227 chr3R 6206298 exon Osi24 + chr3R 6206412 intron Osi24 + chr3R 6206525 intron Osi24 + chr3R_5_6205001 chr3R_6205001 RAL-392 1723 chr3R 6461586 6461611 chr3R 6461679 6461711 9 90 6.0 6.0 6.0 1.3 125 chr3R 6461586 intergenic not near genes chr3R 6461648 intergenic not near genes chr3R 6461711 intergenic not near genes chr3R_9_6460001 chr3R_6460001 RAL-392 1724 chr3R 6510018 6510049 chr3R 6515113 6515142 jockey 5 5098 6.5 5.5 6.0 0.7 5124 chr3R 6510018 intergenic not near genes chr3R 6512580 intergenic not near genes chr3R 6515142 intergenic not near genes chr3R_5_6510001 chr3R_6510001 RAL-392 1725 chr3R 6524942 6524995 chr3R 6525055 6525108 8 112 6.5 10.0 8.2 0.9 166 chr3R 6524942 intergenic not near genes chr3R 6525025 intergenic not near genes chr3R 6525108 intergenic not near genes chr3R_8_6525001 chr3R_6525001 RAL-392 1726 chr3R 6526349 6526374 chr3R 6526546 6526579 7 207 10.5 15.5 13.0 0.5 230 chr3R 6526349 intergenic not near genes chr3R 6526464 intergenic not near genes chr3R 6526579 intergenic not near genes chr3R_7_6525001 chr3R_6525001 RAL-392 1727 chr3R 6737503 6737528 chr3R 6739285 6739317 Doc 10 1797 1.5 4.0 2.8 2.6 1814 chr3R 6737503 intron pb - chr3R 6738410 intron pb - chr3R 6739317 intron pb - chr3R_10_6735001 chr3R_6735001 RAL-392 1728 chr3R 6856367 6856400 chr3R 6856502 6856537 12 134 4.0 3.0 3.5 2.7 170 chr3R 6856367 intergenic not near genes chr3R 6856452 intergenic not near genes chr3R 6856537 intergenic not near genes chr3R_12_6855001 chr3R_6855001 RAL-392 1729 chr3R 6862201 6862253 chr3R 6862308 6862342 17 102 1.5 6.5 4.0 3.4 141 chr3R 6862201 intergenic not near genes chr3R 6862272 intergenic not near genes chr3R 6862342 intergenic not near genes chr3R_17_6860001 chr3R_6860001 RAL-392 1730 chr3R 6958928 6958946 chr3R 6959140 6959176 4 220 13.0 14.0 13.5 0.3 248 chr3R 6958928 intron Antp - chr3R 6959052 intron Antp - chr3R 6959176 intron Antp - chr3R_4_6955001 chr3R_6955001 RAL-392 1731 chr3R 6968442 6968478 chr3R 6968536 6968561 10 95 7.5 13.5 10.5 0.9 119 chr3R 6968442 intron Antp - chr3R 6968502 intron Antp - chr3R 6968561 intron Antp - chr3R_10_6965001 chr3R_6965001 RAL-392 1732 chr3R 7103274 7103312 chr3R 7103362 7103408 6 87 3.5 3.0 3.2 1.4 134 chr3R 7103274 intron Alh - chr3R 7103341 intron Alh - chr3R 7103408 intron Alh - chr3R_6_7100001 chr3R_7100001 RAL-392 1733 chr3R 7126508 7126529 chr3R 7126608 7126643 6 111 12.0 12.5 12.2 0.5 135 chr3R 7126508 3` UTR CG10068 - chr3R 7126576 3` UTR CG10068 - chr3R 7126643 3` UTR CG10068 - chr3R_6_7125001 chr3R_7125001 RAL-392 1734 chr3R 7173691 7173709 chr3R 7173768 7173802 9 96 7.5 7.5 7.5 1.1 111 chr3R 7173691 intron sas + chr3R 7173746 intron sas + chr3R 7173802 intron sas + chr3R_9_7170001 chr3R_7170001 RAL-392 1735 chr3R 7210608 7210614 chr3R 7210691 7210720 7 99 0.0 10.5 5.2 1.1 112 chr3R 7210608 intergenic not near genes chr3R 7210664 intergenic not near genes chr3R 7210720 intergenic not near genes chr3R_7_7210001 chr3R_7210001 RAL-392 1736 chr3R 7217441 7217483 chr3R 7217682 7217724 11 240 13.5 8.0 10.8 0.9 283 chr3R 7217441 intergenic CG14605 -,CG14606 - chr3R 7217582 intergenic CG14605 -,CG14606 - chr3R 7217724 3` UTR CG14605 - chr3R_11_7215001 chr3R_7215001 RAL-392 1737 chr3R 7251827 7251861 chr3R 7251908 7251958 7 89 8.5 7.5 8.0 0.8 131 chr3R 7251827 exon Obp84a - chr3R 7251892 exon Obp84a - chr3R 7251958 intergenic Obp84a -,Gld -,CG10050 + chr3R_7_7250001 chr3R_7250001 RAL-392 1738 chr3R 7538659 7538676 chr3R 7538746 7538778 5 99 12.0 13.0 12.5 0.4 119 chr3R 7538659 intergenic alpha-Est4 -,alpha-Est3 - chr3R 7538718 intergenic alpha-Est4 -,alpha-Est3 - chr3R 7538778 intergenic alpha-Est4 -,alpha-Est3 - chr3R_5_7535001 chr3R_7535001 RAL-392 1739 chr3R 7677903 7677946 chr3R 7678036 7678045 6 118 1.0 4.5 2.8 1.6 142 chr3R 7677903 intron Nlg1 + chr3R 7677974 intron Nlg1 + chr3R 7678045 intron Nlg1 + chr3R_6_7675001 chr3R_7675001 RAL-392 1740 chr3R 7680403 7680446 chr3R 7680505 7680522 7 97 11.5 12.5 12.0 0.5 119 chr3R 7680403 intron Nlg1 + chr3R 7680462 intron Nlg1 + chr3R 7680522 intron Nlg1 + chr3R_7_7680001 chr3R_7680001 RAL-392 1741 chr3R 7684410 7684457 chr3R 7686348 7686368 8 1918 10.0 13.5 11.8 0.6 1958 chr3R 7684410 intron Nlg1 + chr3R 7685389 intron Nlg1 + chr3R 7686368 intron Nlg1 + chr3R_8_7685001 chr3R_7685001 RAL-392 1742 chr3R 7687810 7687820 chr3R 7687885 7687919 4 94 7.5 12.5 10.0 0.4 109 chr3R 7687810 intron Nlg1 + chr3R 7687864 intron Nlg1 + chr3R 7687919 intron Nlg1 + chr3R_4_7685001 chr3R_7685001 RAL-392 1743 chr3R 7694556 7694604 chr3R 7713637 7713685 invader3 22 19080 7.0 1.5 4.2 4.2 19129 chr3R 7694556 3` UTR Nlg1 + chr3R 7704120 intergenic not near genes chr3R 7713685 intergenic not near genes chr3R_22_7700001 chr3R_7700001 RAL-392 1744 chr3R 7729460 7729492 chr3R 7737418 7737435 Stalker2 5 7955 5.0 10.0 7.5 0.6 7975 chr3R 7729460 intergenic not near genes chr3R 7733448 intergenic not near genes chr3R 7737435 intergenic not near genes chr3R_5_7730001 chr3R_7730001 RAL-392 1745 chr3R 7849655 7849674 chr3R 7850826 7850843 1360 6 1175 6.0 23.0 14.5 0.4 1188 chr3R 7849655 intron CG34384 + chr3R 7850249 intron CG34384 + chr3R 7850843 intron CG34384 + chr3R_6_7850001 chr3R_7850001 RAL-392 1746 chr3R 7874741 7874774 chr3R 7875011 7875046 7 269 9.5 12.5 11.0 0.6 305 chr3R 7874741 intron CG17816 - chr3R 7874894 intron CG17816 - chr3R 7875046 intron CG17816 - chr3R_7_7870001 chr3R_7870001 RAL-392 1747 chr3R 7961742 7961754 chr3R 7961843 7961855 5 100 11.0 10.0 10.5 0.4 113 chr3R 7961742 intron dsx - chr3R 7961798 intron dsx - chr3R 7961855 intron dsx - chr3R_5_7960001 chr3R_7960001 RAL-392 1748 chr3R 7973303 7973340 chr3R 7974385 7974419 1360 8 1079 5.5 4.0 4.8 1.4 1116 chr3R 7973303 intergenic not near genes chr3R 7973861 intergenic not near genes chr3R 7974419 3` UTR CD98hc - chr3R_8_7970001 chr3R_7970001 RAL-392 1749 chr3R 8040649 8040679 chr3R 8040753 8040783 11 103 7.5 7.5 7.5 1.3 134 chr3R 8040649 intergenic not near genes chr3R 8040716 intergenic not near genes chr3R 8040783 intergenic CG43060 + chr3R_11_8040001 chr3R_8040001 RAL-392 1750 chr3R 8041190 8041201 chr3R 8041308 8041319 6 117 31.0 21.5 26.2 0.2 129 chr3R 8041190 intergenic CG43060 + chr3R 8041254 exon CG43060 + chr3R 8041319 intron CG43060 + chr3R_6_8040001 chr3R_8040001 RAL-392 1751 chr3R 8056167 8056184 chr3R 8056309 8056354 5 159 1.5 3.5 2.5 1.4 187 chr3R 8056167 intergenic CG43060 + chr3R 8056260 intergenic CG43060 + chr3R 8056354 intergenic CG43060 + chr3R_5_8055001 chr3R_8055001 RAL-392 1752 chr3R 8082567 8082592 chr3R 8082664 8082689 11 97 9.0 6.0 7.5 1.3 122 chr3R 8082567 intron mAChR-B + chr3R 8082628 intron mAChR-B + chr3R 8082689 intron mAChR-B + chr3R_11_8080001 chr3R_8080001 RAL-392 1753 chr3R 8094397 8094418 chr3R 8099722 8099743 Transpac 12 5324 12.0 7.0 9.5 1.1 5346 chr3R 8094397 intron CG7900 + chr3R 8097070 intron CG7900 + chr3R 8099743 intron CG7900 + chr3R_12_8095001 chr3R_8095001 RAL-392 1754 chr3R 8094419 8094433 chr3R 8099718 8099758 Transpac 5 5317 7.5 6.0 6.8 0.6 5339 chr3R 8094419 intron CG7900 + chr3R 8097088 intron CG7900 + chr3R 8099758 intron CG7900 + chr3R_5_8095001 chr3R_8095001 RAL-392 1755 chr3R 8107366 8107414 chr3R 8107520 8107568 23 149 7.5 4.0 5.8 3.4 202 chr3R 8107366 intron puc + chr3R 8107467 intron puc + chr3R 8107568 intron puc + chr3R_23_8105001 chr3R_8105001 RAL-392 1756 chr3R 8182670 8182684 chr3R 8182748 8182794 6 96 6.5 5.0 5.8 0.9 124 chr3R 8182670 intergenic not near genes chr3R 8182732 intergenic not near genes chr3R 8182794 intergenic not near genes chr3R_6_8180001 chr3R_8180001 RAL-392 1757 chr3R 8194634 8194651 chr3R 8194717 8194720 4 81 8.0 3.0 5.5 0.6 86 chr3R 8194634 intergenic not near genes chr3R 8194677 intergenic not near genes chr3R 8194720 intergenic not near genes chr3R_4_8190001 chr3R_8190001 RAL-392 1758 chr3R 8303591 8303605 chr3R 8305330 8305336 4 1741 20.5 15.0 17.8 0.2 1745 chr3R 8303591 exon nac - chr3R 8304464 3` UTR Sgt1 - chr3R 8305336 intergenic Sgt1 - chr3R_4_8300001 chr3R_8300001 RAL-392 1759 chr3R 8339246 8339247 chr3R 21907534 21907536 9 13568289 18.5 20.5 19.5 0.4 13568290 chr3R 8339246 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_9_15120001 chr3R_15120001 RAL-392 1760 chr3R 8376367 8376373 chr3R 8376748 8376798 5 393 45.0 29.0 37.0 0.1 431 chr3R 8376367 intron CG45263 - chr3R 8376582 intron CG45263 - chr3R 8376798 intron CG45263 - chr3R_5_8375001 chr3R_8375001 RAL-392 1761 chr3R 8393570 8393604 chr3R 8393664 8393692 4 91 7.0 11.5 9.2 0.4 122 chr3R 8393570 intron CG45263 - chr3R 8393631 intron CG45263 - chr3R 8393692 intron CG45263 - chr3R_4_8390001 chr3R_8390001 RAL-392 1762 chr3R 8403023 8403035 chr3R 8412171 8412215 roo 7 9166 1.5 3.5 2.5 2.0 9192 chr3R 8403023 intron CG45263 - chr3R 8407619 intron CG45263 - chr3R 8412215 intron CG45263 - chr3R_7_8405001 chr3R_8405001 RAL-392 1763 chr3R 8430797 8430836 chr3R 8430977 8430980 4 170 5.0 9.5 7.2 0.5 183 chr3R 8430797 intron CG45263 - chr3R 8430888 intron CG45263 - chr3R 8430980 intron CG45263 - chr3R_4_8430001 chr3R_8430001 RAL-392 1764 chr3R 8459779 8459821 chr3R 8459915 8459957 6 128 10.5 6.0 8.2 0.7 178 chr3R 8459779 intron CG45263 - chr3R 8459868 intron CG45263 - chr3R 8459957 intron CG45263 - chr3R_6_8455001 chr3R_8455001 RAL-392 1765 chr3R 8534762 8534799 chr3R 8535039 8535076 4 276 4.0 3.5 3.8 0.8 314 chr3R 8534762 intergenic not near genes chr3R 8534919 intergenic not near genes chr3R 8535076 intergenic not near genes chr3R_4_8530001 chr3R_8530001 RAL-392 1766 chr3R 8541328 8541352 chr3R 8541429 8541452 6 95 6.5 6.5 6.5 0.8 124 chr3R 8541328 intergenic not near genes chr3R 8541390 intergenic not near genes chr3R 8541452 intergenic not near genes chr3R_6_8540001 chr3R_8540001 RAL-392 1767 chr3R 8541353 8541368 chr3R 8541423 8541469 8 85 3.0 5.5 4.2 1.5 116 chr3R 8541353 intergenic not near genes chr3R 8541411 intergenic not near genes chr3R 8541469 intergenic not near genes chr3R_8_8540001 chr3R_8540001 RAL-392 1768 chr3R 8558214 8558238 chr3R 8558325 8558349 5 110 3.5 3.5 3.5 1.1 135 chr3R 8558214 intergenic not near genes chr3R 8558282 intergenic not near genes chr3R 8558349 intergenic not near genes chr3R_5_8555001 chr3R_8555001 RAL-392 1769 chr3R 8570465 8570487 chr3R 8575116 8575143 HMS-Beagle 4 4648 14.0 6.0 10.0 0.4 4678 chr3R 8570465 intergenic not near genes chr3R 8572804 intergenic not near genes chr3R 8575143 intergenic not near genes chr3R_4_8570001 chr3R_8570001 RAL-392 1770 chr3R 8570490 8570509 chr3R 8575112 8575155 HMS-Beagle 6 4634 8.5 4.0 6.2 0.8 4665 chr3R 8570490 intergenic not near genes chr3R 8572822 intergenic not near genes chr3R 8575155 intergenic not near genes chr3R_6_8570001 chr3R_8570001 RAL-392 1771 chr3R 8601753 8601795 chr3R 8610925 8610940 roo 6 9166 2.0 2.5 2.2 1.9 9187 chr3R 8601753 intron 5-HT2B + chr3R 8606346 intron 5-HT2B + chr3R 8610940 intron 5-HT2B + chr3R_6_8605001 chr3R_8605001 RAL-392 1772 chr3R 8684087 8684097 chr3R 8684184 8684194 4 97 4.5 8.5 6.5 0.5 107 chr3R 8684087 intron CR44937 - chr3R 8684140 intron CR44937 - chr3R 8684194 intron CR44937 - chr3R_4_8680001 chr3R_8680001 RAL-392 1773 chr3R 8685279 8685315 chr3R 8685399 8685435 10 119 3.0 8.5 5.8 1.5 156 chr3R 8685279 intron CR44937 - chr3R 8685357 intron CR44937 - chr3R 8685435 intron CR44937 - chr3R_10_8685001 chr3R_8685001 RAL-392 1774 chr3R 8798631 8798685 chr3R 8798734 8798765 20 92 2.0 4.0 3.0 5.0 134 chr3R 8798631 intron,intron Pif1A -,Pif1B - chr3R 8798698 intron,intron Pif1A -,Pif1B - chr3R 8798765 intron,intron Pif1A -,Pif1B - chr3R_20_8795001 chr3R_8795001 RAL-392 1775 chr3R 9036360 9036385 chr3R 9036458 9036478 13 96 5.5 6.0 5.8 1.9 118 chr3R 9036360 intron neur - chr3R 9036419 intron neur - chr3R 9036478 intron neur - chr3R_13_9035001 chr3R_9035001 RAL-392 1776 chr3R 9036387 9036397 chr3R 9036450 9036495 4 88 4.0 4.5 4.2 0.8 108 chr3R 9036387 intron neur - chr3R 9036441 intron neur - chr3R 9036495 intron neur - chr3R_4_9035001 chr3R_9035001 RAL-392 1777 chr3R 9108847 9108878 chr3R 9108943 9108974 9 96 5.5 2.5 4.0 1.8 127 chr3R 9108847 intron pum - chr3R 9108910 intron pum - chr3R 9108974 intron pum - chr3R_9_9105001 chr3R_9105001 RAL-392 1778 chr3R 9204260 9204276 chr3R 9204339 9204360 5 82 8.0 5.0 6.5 0.7 100 chr3R 9204260 intron pum - chr3R 9204310 intron pum - chr3R 9204360 intron pum - chr3R_5_9200001 chr3R_9200001 RAL-392 1779 chr3R 9295003 9295035 chr3R 9295101 9295128 9 95 7.5 5.5 6.5 1.2 125 chr3R 9295003 3` UTR CG8861 - chr3R 9295066 3` UTR CG8861 - chr3R 9295128 3` UTR CG8861 - chr3R_9_9295001 chr3R_9295001 RAL-392 1780 chr3R 9319575 9319609 chr3R 9320009 9320029 jockey 14 446 10.5 7.0 8.8 1.4 454 chr3R 9319575 intron CG8861 - chr3R 9319802 intron CG8861 - chr3R 9320029 intron CG8861 - chr3R_14_9315001 chr3R_9315001 RAL-392 1781 chr3R 9330038 9330039 chr3R 18955051 18955052 4 9625013 10.5 19.0 14.8 0.3 9625014 chr3R 9330038 intron CG12951 - chr3R 14142545 intergenic not near genes chr3R 18955052 intron,intron CG42613 +,CG43732 + chr3R_4_14140001 chr3R_14140001 RAL-392 1782 chr3R 9361809 9361845 chr3R 9362070 9362106 pogo 17 259 5.0 9.5 7.2 2.1 297 chr3R 9361809 3` UTR CG45050 + chr3R 9361958 3` UTR CG45050 + chr3R 9362106 3` UTR CG45050 + chr3R_17_9360001 chr3R_9360001 RAL-392 1783 chr3R 9447440 9447461 chr3R 9447564 9447585 5 124 4.0 7.5 5.8 0.7 145 chr3R 9447440 intron ps + chr3R 9447512 intron ps + chr3R 9447585 intron ps + chr3R_5_9445001 chr3R_9445001 RAL-392 1784 chr3R 9586674 9586694 chr3R 9586786 9586806 6 111 4.0 2.0 3.0 1.5 132 chr3R 9586674 intergenic CG8301 +,P58IPK + chr3R 9586740 intergenic CG8301 +,P58IPK + chr3R 9586806 intergenic P58IPK +,CG8301 + chr3R_6_9585001 chr3R_9585001 RAL-392 1785 chr3R 9586696 9586723 chr3R 9586782 9586835 6 106 2.0 1.5 1.8 2.1 139 chr3R 9586696 intergenic CG8301 +,P58IPK + chr3R 9586766 intergenic CG8301 +,P58IPK + chr3R 9586835 intergenic P58IPK +,CG8301 + chr3R_6_9585001 chr3R_9585001 RAL-392 1786 chr3R 9610840 9610870 chr3R 9610983 9611031 8 158 4.0 2.5 3.2 1.9 191 chr3R 9610840 intron CG8312 + chr3R 9610936 intron CG8312 + chr3R 9611031 intron CG8312 + chr3R_8_9610001 chr3R_9610001 RAL-392 1787 chr3R 9644575 9644614 chr3R 9644663 9644715 15 98 4.5 9.0 6.8 1.9 140 chr3R 9644575 intron Dh44 + chr3R 9644645 intron Dh44 + chr3R 9644715 intron Dh44 + chr3R_15_9640001 chr3R_9640001 RAL-392 1788 chr3R 9675333 9675360 chr3R 9675588 9675590 5 254 5.0 3.0 4.0 1.0 257 chr3R 9675333 intergenic CG8358 + chr3R 9675462 intergenic CG8358 + chr3R 9675590 exon CG8358 + chr3R_5_9675001 chr3R_9675001 RAL-392 1789 chr3R 9878001 9878023 chr3R 9878108 9878111 5 97 2.0 3.5 2.8 1.3 110 chr3R 9878001 intron,intron Glut4EF +,CR45029 - chr3R 9878056 intron,intron Glut4EF +,CR45029 - chr3R 9878111 intron,intron Glut4EF +,CR45029 - chr3R_5_9875001 chr3R_9875001 RAL-392 1790 chr3R 9898770 9898811 chr3R 9898882 9898923 7 110 6.0 2.5 4.2 1.3 153 chr3R 9898770 intron Glut4EF + chr3R 9898846 intron Glut4EF + chr3R 9898923 intron Glut4EF + chr3R_7_9895001 chr3R_9895001 RAL-392 1791 chr3R 10073773 10073800 chr3R 10073885 10073929 5 123 1.5 5.0 3.2 1.2 156 chr3R 10073773 intergenic nerfin-2 +,CG5361 - chr3R 10073851 3` UTR CG5361 - chr3R 10073929 exon CG5361 - chr3R_5_10070001 chr3R_10070001 RAL-392 1792 chr3R 10231781 10231813 chr3R 10237358 10237360 mdg3 10 5584 2.5 5.0 3.8 2.1 5579 chr3R 10231781 intron CG42795 + chr3R 10234570 intron CG42795 + chr3R 10237360 intron CG42795 + chr3R_10_10230001 chr3R_10230001 RAL-392 1793 chr3R 10255362 10255387 chr3R 10260822 10260847 I-element 13 5460 13.5 5.0 9.2 1.3 5485 chr3R 10255362 3` UTR Sirt6 - chr3R 10258104 intron Sirt6 - chr3R 10260847 exon Sirt6 - chr3R_13_10255001 chr3R_10255001 RAL-392 1794 chr3R 10349823 10349857 chr3R 10349904 10349956 15 92 5.0 3.0 4.0 3.0 133 chr3R 10349823 exon CG31406 + chr3R 10349890 exon CG31406 + chr3R 10349956 3` UTR CG31406 + chr3R_15_10345001 chr3R_10345001 RAL-392 1795 chr3R 10430664 10430707 chr3R 10430763 10430770 8 98 7.0 4.5 5.8 1.2 106 chr3R 10430664 intergenic not near genes chr3R 10430717 intergenic not near genes chr3R 10430770 intergenic not near genes chr3R_8_10430001 chr3R_10430001 RAL-392 1796 chr3R 10531866 10531893 chr3R 10531951 10531990 4 96 4.0 3.5 3.8 0.8 124 chr3R 10531866 intron hth - chr3R 10531928 intron hth - chr3R 10531990 intron hth - chr3R_4_10530001 chr3R_10530001 RAL-392 1797 chr3R 10535315 10535327 chr3R 10535428 10535438 6 113 4.5 0.0 2.2 1.9 123 chr3R 10535315 intron hth - chr3R 10535376 intron hth - chr3R 10535438 intron hth - chr3R_6_10535001 chr3R_10535001 RAL-392 1798 chr3R 10535328 10535341 chr3R 10535427 10535454 10 110 2.0 0.0 1.0 5.0 126 chr3R 10535328 intron hth - chr3R 10535391 intron hth - chr3R 10535454 intron hth - chr3R_10_10535001 chr3R_10535001 RAL-392 1799 chr3R 10627679 10627712 chr3R 10627864 10627897 9 181 6.5 4.0 5.2 1.5 218 chr3R 10627679 intergenic not near genes chr3R 10627788 intergenic not near genes chr3R 10627897 intergenic not near genes chr3R_9_10625001 chr3R_10625001 RAL-392 1800 chr3R 10731117 10731121 chr3R 10731433 10731448 5 327 3.0 3.5 3.2 1.2 331 chr3R 10731117 intergenic not near genes chr3R 10731282 intergenic not near genes chr3R 10731448 intergenic not near genes chr3R_5_10730001 chr3R_10730001 RAL-392 1801 chr3R 10752700 10752748 chr3R 10752805 10752842 9 101 1.5 3.0 2.2 2.8 142 chr3R 10752700 intergenic not near genes chr3R 10752771 intergenic not near genes chr3R 10752842 intergenic CG14691 - chr3R_9_10750001 chr3R_10750001 RAL-392 1802 chr3R 10804168 10804182 chr3R 10811720 10811734 17.6 4 7550 6.5 8.0 7.2 0.5 7566 chr3R 10804168 intergenic CG14692 - chr3R 10807951 intergenic not near genes chr3R 10811734 3` UTR CG14693 - chr3R_4_10805001 chr3R_10805001 RAL-392 1803 chr3R 10804184 10804198 chr3R 10811705 10811750 17.6 7 7544 5.5 5.0 5.2 1.1 7566 chr3R 10804184 intergenic CG14692 - chr3R 10807967 intergenic not near genes chr3R 10811750 3` UTR CG14693 - chr3R_7_10805001 chr3R_10805001 RAL-392 1804 chr3R 10886863 10886896 chr3R 10886963 10886996 16 100 2.0 4.5 3.2 3.8 133 chr3R 10886863 intron Leash + chr3R 10886930 intron Leash + chr3R 10886996 intron Leash + chr3R_16_10885001 chr3R_10885001 RAL-392 1805 chr3R 10942211 10942254 chr3R 10942298 10942312 20 95 6.0 8.0 7.0 2.5 101 chr3R 10942211 intergenic not near genes chr3R 10942262 intergenic not near genes chr3R 10942312 intergenic not near genes chr3R_20_10940001 chr3R_10940001 RAL-392 1806 chr3R 11030051 11030098 chr3R 11030165 11030212 10 111 3.5 1.5 2.5 2.9 161 chr3R 11030051 intron CG34114 + chr3R 11030132 intron CG34114 + chr3R 11030212 intron CG34114 + chr3R_10_11030001 chr3R_11030001 RAL-392 1807 chr3R 11054568 11054596 chr3R 11054672 11054713 4 114 2.0 2.5 2.2 1.2 145 chr3R 11054568 intergenic not near genes chr3R 11054640 intergenic not near genes chr3R 11054713 intergenic not near genes chr3R_4_11050001 chr3R_11050001 RAL-392 1808 chr3R 11056876 11056895 chr3R 11056974 11056993 4 96 8.5 0.0 4.2 0.8 117 chr3R 11056876 intergenic not near genes chr3R 11056934 intergenic not near genes chr3R 11056993 intergenic not near genes chr3R_4_11055001 chr3R_11055001 RAL-392 1809 chr3R 11059274 11059328 chr3R 11059374 11059428 25 98 2.0 5.0 3.5 5.6 154 chr3R 11059274 intergenic not near genes chr3R 11059351 intergenic not near genes chr3R 11059428 intergenic not near genes chr3R_25_11055001 chr3R_11055001 RAL-392 1810 chr3R 11104969 11104983 chr3R 11105070 11105089 4 103 2.5 10.0 6.2 0.6 120 chr3R 11104969 intergenic not near genes chr3R 11105029 intergenic not near genes chr3R 11105089 intergenic not near genes chr3R_4_11105001 chr3R_11105001 RAL-392 1811 chr3R 11104985 11105000 chr3R 11105054 11105090 5 84 1.0 5.5 3.2 1.2 105 chr3R 11104985 intergenic not near genes chr3R 11105038 intergenic not near genes chr3R 11105090 intergenic not near genes chr3R_5_11105001 chr3R_11105001 RAL-392 1812 chr3R 11128432 11128465 chr3R 11128710 11128722 13 270 7.5 5.5 6.5 1.7 290 chr3R 11128432 intergenic Ugt86Dd - chr3R 11128577 intergenic Ugt86Dd - chr3R 11128722 intergenic Ugt86Dd - chr3R_13_11125001 chr3R_11125001 RAL-392 1813 chr3R 11142497 11142542 chr3R 11142632 11142636 5 125 1.5 1.0 1.2 2.3 139 chr3R 11142497 intergenic not near genes chr3R 11142566 intergenic not near genes chr3R 11142636 intergenic not near genes chr3R_5_11140001 chr3R_11140001 RAL-392 1814 chr3R 11151672 11151703 chr3R 11156545 11156582 8 4877 37.5 28.5 33.0 0.2 4910 chr3R 11151672 3` UTR Ugt86Di - chr3R 11154127 intergenic Ugt86Di -,Ugt86Dc + chr3R 11156582 intergenic Ugt86Dc + chr3R_8_11150001 chr3R_11150001 RAL-392 1815 chr3R 11174577 11174615 chr3R 11175305 11175342 9 722 15.5 16.0 15.8 0.5 765 chr3R 11174577 exon Ugt86Dj - chr3R 11174960 intron Ugt86Dj - chr3R 11175342 exon Ugt86Dj - chr3R_9_11170001 chr3R_11170001 RAL-392 1816 chr3R 11263387 11263430 chr3R 11263491 11263523 4 90 2.5 4.5 3.5 0.9 136 chr3R 11263387 intergenic not near genes chr3R 11263455 intergenic not near genes chr3R 11263523 intergenic not near genes chr3R_4_11260001 chr3R_11260001 RAL-392 1817 chr3R 11269428 11269479 chr3R 11269573 11269589 7 132 2.0 1.0 1.5 2.8 161 chr3R 11269428 3` UTR CR31386 - chr3R 11269508 3` UTR CR31386 - chr3R 11269589 3` UTR CR31386 - chr3R_7_11265001 chr3R_11265001 RAL-392 1818 chr3R 11303072 11303078 chr3R 11303172 11303178 4 100 8.5 2.0 5.2 0.6 106 chr3R 11303072 intron CR31386 - chr3R 11303125 intron CR31386 - chr3R 11303178 intron CR31386 - chr3R_4_11300001 chr3R_11300001 RAL-392 1819 chr3R 11379221 11379248 chr3R 11388396 11388423 roo 7 9174 10.0 3.5 6.8 0.9 9202 chr3R 11379221 intron pros + chr3R 11383822 intron pros + chr3R 11388423 intron pros + chr3R_7_11380001 chr3R_11380001 RAL-392 1820 chr3R 11476934 11476961 chr3R 11477056 11477077 5 121 8.5 7.0 7.8 0.6 143 chr3R 11476934 intergenic not near genes chr3R 11477006 intergenic not near genes chr3R 11477077 intergenic not near genes chr3R_5_11475001 chr3R_11475001 RAL-392 1821 chr3R 11483436 11483480 chr3R 11483536 11483575 7 81 3.0 4.0 3.5 1.6 139 chr3R 11483436 intergenic not near genes chr3R 11483506 intergenic not near genes chr3R 11483575 intergenic not near genes chr3R_7_11480001 chr3R_11480001 RAL-392 1822 chr3R 11640517 11640542 chr3R 11640606 11640657 7 101 2.5 8.0 5.2 1.1 140 chr3R 11640517 intron Csk - chr3R 11640587 intron Csk - chr3R 11640657 intron Csk - chr3R_7_11640001 chr3R_11640001 RAL-392 1823 chr3R 11694706 11694725 chr3R 11694819 11694838 9 113 10.5 8.0 9.2 0.9 132 chr3R 11694706 intergenic Fer3 - chr3R 11694772 intergenic Fer3 - chr3R 11694838 intergenic not near genes chr3R_9_11690001 chr3R_11690001 RAL-392 1824 chr3R 11694731 11694753 chr3R 11694818 11694839 13 99 6.5 8.0 7.2 1.6 108 chr3R 11694731 intergenic Fer3 - chr3R 11694785 intergenic Fer3 - chr3R 11694839 intergenic not near genes chr3R_13_11690001 chr3R_11690001 RAL-392 1825 chr3R 11710214 11710235 chr3R 11710282 11710332 10 82 7.0 3.0 5.0 1.7 118 chr3R 11710214 intergenic not near genes chr3R 11710273 intergenic not near genes chr3R 11710332 intergenic not near genes chr3R_10_11710001 chr3R_11710001 RAL-392 1826 chr3R 11734159 11734187 chr3R 11734298 11734306 4 130 2.5 6.5 4.5 0.7 147 chr3R 11734159 intergenic not near genes chr3R 11734232 intergenic not near genes chr3R 11734306 intergenic not near genes chr3R_4_11730001 chr3R_11730001 RAL-392 1827 chr3R 11919299 11919335 chr3R 11919391 11919430 13 87 6.0 2.5 4.2 2.5 131 chr3R 11919299 intron Cad87A - chr3R 11919364 intron Cad87A - chr3R 11919430 intron Cad87A - chr3R_13_11915001 chr3R_11915001 RAL-392 1828 chr3R 11945363 11945405 chr3R 11945481 11945492 12 112 2.5 3.5 3.0 3.0 129 chr3R 11945363 intron Cad87A - chr3R 11945428 intron Cad87A - chr3R 11945492 intron Cad87A - chr3R_12_11945001 chr3R_11945001 RAL-392 1829 chr3R 11957841 11957869 chr3R 11958136 11958151 S-element 8 294 3.5 1.0 2.2 2.5 310 chr3R 11957841 intergenic not near genes chr3R 11957996 intergenic not near genes chr3R 11958151 intergenic not near genes chr3R_8_11955001 chr3R_11955001 RAL-392 1830 chr3R 12022877 12022916 chr3R 12025073 12025100 pogo 6 2183 5.0 7.5 6.2 0.8 2223 chr3R 12022877 intergenic not near genes chr3R 12023988 intergenic not near genes chr3R 12025100 intergenic not near genes chr3R_6_12020001 chr3R_12020001 RAL-392 1831 chr3R 12045160 12045197 chr3R 12045256 12045273 5 91 1.5 1.5 1.5 2.0 113 chr3R 12045160 intergenic not near genes chr3R 12045216 intergenic not near genes chr3R 12045273 intergenic not near genes chr3R_5_12045001 chr3R_12045001 RAL-392 1832 chr3R 12080866 12080896 chr3R 12080941 12080983 9 90 6.0 4.0 5.0 1.5 117 chr3R 12080866 intron CG14741 - chr3R 12080924 intron CG14741 - chr3R 12080983 intron CG14741 - chr3R_9_12080001 chr3R_12080001 RAL-392 1833 chr3R 12135488 12135532 chr3R 12135747 12135751 4 241 1.0 4.0 2.5 1.1 263 chr3R 12135488 intergenic not near genes chr3R 12135620 intergenic not near genes chr3R 12135751 intergenic not near genes chr3R_4_12135001 chr3R_12135001 RAL-392 1834 chr3R 12165843 12165896 chr3R 12165941 12165994 17 98 6.0 3.5 4.8 2.9 151 chr3R 12165843 intron Cpn - chr3R 12165918 intron Cpn - chr3R 12165994 intron Cpn - chr3R_17_12165001 chr3R_12165001 RAL-392 1835 chr3R 12307212 12307261 chr3R 12307315 12307364 18 100 4.0 3.0 3.5 4.0 152 chr3R 12307212 intergenic not near genes chr3R 12307288 intergenic not near genes chr3R 12307364 intergenic not near genes chr3R_18_12305001 chr3R_12305001 RAL-392 1836 chr3R 12365722 12365749 chr3R 12365797 12365849 13 82 5.0 4.5 4.8 2.2 127 chr3R 12365722 5` UTR GstD10 - chr3R 12365786 intergenic GstD10 -,GstD9 - chr3R 12365849 intergenic GstD10 -,GstD9 - chr3R_13_12365001 chr3R_12365001 RAL-392 1837 chr3R 12376376 12376417 chr3R 12376482 12376523 17 101 1.0 2.0 1.5 6.8 147 chr3R 12376376 exon GstD5 + chr3R 12376450 3` UTR GstD5 + chr3R 12376523 3` UTR GstD5 + chr3R_17_12375001 chr3R_12375001 RAL-392 1838 chr3R 12546442 12546487 chr3R 12546538 12546578 15 97 6.0 9.0 7.5 1.8 136 chr3R 12546442 intron Octbeta3R - chr3R 12546510 intron Octbeta3R - chr3R 12546578 intron Octbeta3R - chr3R_15_12545001 chr3R_12545001 RAL-392 1839 chr3R 12602587 12602595 chr3R 12602703 12602751 5 125 36.0 42.5 39.2 0.1 164 chr3R 12602587 intergenic not near genes chr3R 12602669 intergenic not near genes chr3R 12602751 intergenic not near genes chr3R_5_12600001 chr3R_12600001 RAL-392 1840 chr3R 12739026 12739071 chr3R 12739112 12739131 10 86 4.5 6.5 5.5 1.5 105 chr3R 12739026 intergenic not near genes chr3R 12739078 intergenic not near genes chr3R 12739131 intergenic not near genes chr3R_10_12735001 chr3R_12735001 RAL-392 1841 chr3R 12787931 12787951 chr3R 12788034 12788054 4 103 3.5 4.5 4.0 0.8 123 chr3R 12787931 intergenic not near genes chr3R 12787992 intergenic not near genes chr3R 12788054 intergenic not near genes chr3R_4_12785001 chr3R_12785001 RAL-392 1842 chr3R 12831169 12831197 chr3R 12831272 12831303 9 104 10.5 3.5 7.0 1.1 134 chr3R 12831169 intergenic not near genes chr3R 12831236 intergenic not near genes chr3R 12831303 intergenic not near genes chr3R_9_12830001 chr3R_12830001 RAL-392 1843 chr3R 12845926 12845945 chr3R 12846077 12846096 11 150 7.0 3.5 5.2 1.8 170 chr3R 12845926 intron beat-Va - chr3R 12846011 intron beat-Va - chr3R 12846096 intron beat-Va - chr3R_11_12845001 chr3R_12845001 RAL-392 1844 chr3R 12845952 12845966 chr3R 12846073 12846117 7 142 4.5 3.5 4.0 1.4 165 chr3R 12845952 intron beat-Va - chr3R 12846034 intron beat-Va - chr3R 12846117 intron beat-Va - chr3R_7_12845001 chr3R_12845001 RAL-392 1845 chr3R 12864530 12864560 chr3R 12865052 12865082 roo 5 522 3.5 4.0 3.8 1.0 552 chr3R 12864530 intergenic not near genes chr3R 12864806 intergenic not near genes chr3R 12865082 intergenic not near genes chr3R_5_12860001 chr3R_12860001 RAL-392 1846 chr3R 12894585 12894599 chr3R 12894717 12894722 4 130 0.0 0.5 0.2 3.3 137 chr3R 12894585 intergenic not near genes chr3R 12894654 intergenic not near genes chr3R 12894722 intergenic not near genes chr3R_4_12890001 chr3R_12890001 RAL-392 1847 chr3R 13143020 13143053 chr3R 13148616 13148639 mdg3 4 5590 8.5 7.0 7.8 0.5 5619 chr3R 13143020 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145830 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148639 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_4_13145001 chr3R_13145001 RAL-392 1848 chr3R 13169166 13169185 chr3R 13173559 13173594 10 4398 29.0 15.0 22.0 0.4 4428 chr3R 13169166 intergenic not near genes chr3R 13171380 intergenic not near genes chr3R 13173594 intergenic not near genes chr3R_10_13170001 chr3R_13170001 RAL-392 1849 chr3R 13190013 13190036 chr3R 13190131 13190132 7 122 3.0 3.0 3.0 1.8 119 chr3R 13190013 intergenic CG14380 + chr3R 13190072 intergenic not near genes chr3R 13190132 intergenic not near genes chr3R_7_13190001 chr3R_13190001 RAL-392 1850 chr3R 13274198 13274229 chr3R 13274292 13274328 10 95 11.5 10.0 10.8 0.8 130 chr3R 13274198 intergenic not near genes chr3R 13274263 intergenic not near genes chr3R 13274328 intergenic not near genes chr3R_10_13270001 chr3R_13270001 RAL-392 1851 chr3R 13274230 13274247 chr3R 13274291 13274346 6 86 8.0 10.5 9.2 0.6 116 chr3R 13274230 intergenic not near genes chr3R 13274288 intergenic not near genes chr3R 13274346 intergenic not near genes chr3R_6_13270001 chr3R_13270001 RAL-392 1852 chr3R 13314088 13314124 chr3R 13318894 13318932 Doc 14 4805 3.5 8.5 6.0 2.0 4844 chr3R 13314088 intergenic not near genes chr3R 13316510 intergenic not near genes chr3R 13318932 intergenic CG45080 - chr3R_14_13315001 chr3R_13315001 RAL-392 1853 chr3R 13348986 13349034 chr3R 13349082 13349123 11 88 6.0 7.0 6.5 1.5 137 chr3R 13348986 intergenic not near genes chr3R 13349054 intergenic not near genes chr3R 13349123 intergenic not near genes chr3R_11_13345001 chr3R_13345001 RAL-392 1854 chr3R 13376253 13376284 chr3R 13376362 13376393 6 106 5.5 5.0 5.2 1.0 140 chr3R 13376253 intron CG9813 - chr3R 13376323 intron CG9813 - chr3R 13376393 intron CG9813 - chr3R_6_13375001 chr3R_13375001 RAL-392 1855 chr3R 13418785 13418815 chr3R 13418891 13418921 9 106 7.0 4.5 5.8 1.3 136 chr3R 13418785 intergenic not near genes chr3R 13418853 intergenic not near genes chr3R 13418921 intergenic not near genes chr3R_9_13415001 chr3R_13415001 RAL-392 1856 chr3R 13435367 13435417 chr3R 13435562 13435611 8 192 4.0 7.0 5.5 1.2 244 chr3R 13435367 intergenic yrt - chr3R 13435489 intergenic not near genes chr3R 13435611 intergenic not near genes chr3R_8_13435001 chr3R_13435001 RAL-392 1857 chr3R 13517226 13517246 chr3R 13520045 13520058 jockey 5 2822 6.0 3.0 4.5 0.9 2832 chr3R 13517226 intergenic not near genes chr3R 13518642 intergenic not near genes chr3R 13520058 intergenic not near genes chr3R_5_13515001 chr3R_13515001 RAL-392 1858 chr3R 13558954 13558963 chr3R 13559184 13559193 6 229 4.0 8.0 6.0 0.9 239 chr3R 13558954 intergenic not near genes chr3R 13559074 intergenic not near genes chr3R 13559193 intergenic not near genes chr3R_6_13555001 chr3R_13555001 RAL-392 1859 chr3R 13603035 13603071 chr3R 13603146 13603166 10 102 8.0 2.0 5.0 1.7 131 chr3R 13603035 intergenic not near genes chr3R 13603100 intergenic not near genes chr3R 13603166 intergenic not near genes chr3R_10_13600001 chr3R_13600001 RAL-392 1860 chr3R 13603338 13603372 chr3R 13603447 13603469 7 104 1.0 2.0 1.5 2.8 131 chr3R 13603338 intergenic not near genes chr3R 13603404 intergenic not near genes chr3R 13603469 intergenic not near genes chr3R_7_13600001 chr3R_13600001 RAL-392 1861 chr3R 13604039 13604088 chr3R 13604294 13604338 18 250 5.5 2.5 4.0 3.6 299 chr3R 13604039 intergenic not near genes chr3R 13604188 intergenic not near genes chr3R 13604338 intergenic not near genes chr3R_18_13600001 chr3R_13600001 RAL-392 1862 chr3R 13606715 13606724 chr3R 13606856 13606880 5 152 5.0 4.0 4.5 0.9 165 chr3R 13606715 intergenic CG9759 - chr3R 13606798 intergenic CG9759 - chr3R 13606880 intergenic CG9759 - chr3R_5_13605001 chr3R_13605001 RAL-392 1863 chr3R 13625672 13625724 chr3R 13625773 13625819 14 98 2.5 6.0 4.2 2.7 147 chr3R 13625672 intergenic not near genes chr3R 13625746 intergenic not near genes chr3R 13625819 intergenic not near genes chr3R_14_13625001 chr3R_13625001 RAL-392 1864 chr3R 13673166 13673214 chr3R 13673583 13673611 7 407 8.0 7.0 7.5 0.8 445 chr3R 13673166 intron Task6 - chr3R 13673388 intron Task6 - chr3R 13673611 intron Task6 - chr3R_7_13670001 chr3R_13670001 RAL-392 1865 chr3R 13844977 13844985 chr3R 13845068 13845082 4 92 7.0 7.5 7.2 0.5 105 chr3R 13844977 intergenic not near genes chr3R 13845030 intergenic not near genes chr3R 13845082 intergenic not near genes chr3R_4_13845001 chr3R_13845001 RAL-392 1866 chr3R 13863692 13863713 chr3R 13863769 13863808 6 86 4.5 3.5 4.0 1.2 116 chr3R 13863692 intergenic not near genes chr3R 13863750 intergenic not near genes chr3R 13863808 intergenic not near genes chr3R_6_13860001 chr3R_13860001 RAL-392 1867 chr3R 14021630 14021678 chr3R 14023467 14023483 S-element 21 1830 4.0 4.5 4.2 4.0 1853 chr3R 14021630 intron rdx - chr3R 14022556 intron rdx - chr3R 14023483 intron rdx - chr3R_21_14020001 chr3R_14020001 RAL-392 1868 chr3R 14058103 14058153 chr3R 14058242 14058293 15 138 4.0 3.0 3.5 3.3 190 chr3R 14058103 5` UTR foxo + chr3R 14058198 intron foxo + chr3R 14058293 intron foxo + chr3R_15_14055001 chr3R_14055001 RAL-392 1869 chr3R 14109075 14109090 chr3R 14109176 14109181 4 98 4.0 8.0 6.0 0.6 106 chr3R 14109075 intergenic CR44237 -,Or88a + chr3R 14109128 intergenic CR44237 -,Or88a + chr3R 14109181 intergenic CR44237 -,Or88a + chr3R_4_14105001 chr3R_14105001 RAL-392 1870 chr3R 14109093 14109114 chr3R 14109168 14109215 11 95 3.0 6.5 4.8 1.9 122 chr3R 14109093 intergenic CR44237 -,Or88a + chr3R 14109154 intergenic CR44237 -,Or88a + chr3R 14109215 intergenic CR44237 -,Or88a + chr3R_11_14105001 chr3R_14105001 RAL-392 1871 chr3R 14166678 14166694 chr3R 14167312 14167348 7 644 2.5 5.0 3.8 1.5 670 chr3R 14166678 3` UTR Dop1R1 - chr3R 14167013 3` UTR Dop1R1 - chr3R 14167348 3` UTR Dop1R1 - chr3R_7_14165001 chr3R_14165001 RAL-392 1872 chr3R 14180809 14180824 chr3R 14185583 14185583 F-element 7 4768 4.0 2.0 3.0 1.8 4774 chr3R 14180809 intron Dop1R1 - chr3R 14183196 intron Dop1R1 - chr3R 14185583 intron Dop1R1 - chr3R_7_14180001 chr3R_14180001 RAL-392 1873 chr3R 14180825 14180841 chr3R 14185575 14185587 F-element 6 4752 4.0 2.0 3.0 1.5 4762 chr3R 14180825 intron Dop1R1 - chr3R 14183206 intron Dop1R1 - chr3R 14185587 intron Dop1R1 - chr3R_6_14180001 chr3R_14180001 RAL-392 1874 chr3R 14194411 14194458 chr3R 14203578 14203612 roo 12 9162 4.5 5.5 5.0 2.0 9201 chr3R 14194411 intron Dop1R1 - chr3R 14199012 intron Dop1R1 - chr3R 14203612 intron Dop1R1 - chr3R_12_14195001 chr3R_14195001 RAL-392 1875 chr3R 14294026 14294061 chr3R 14294124 14294156 7 94 5.0 5.5 5.2 1.1 130 chr3R 14294026 intron CG12207 + chr3R 14294091 intron CG12207 + chr3R 14294156 intron CG12207 + chr3R_7_14290001 chr3R_14290001 RAL-392 1876 chr3R 14327671 14327724 chr3R 14327773 14327826 14 97 5.0 7.0 6.0 2.0 155 chr3R 14327671 3` UTR CG3321 + chr3R 14327748 intergenic CG3321 +,spn-B + chr3R 14327826 intergenic CG3321 +,spn-B + chr3R_14_14325001 chr3R_14325001 RAL-392 1877 chr3R 14365725 14365757 chr3R 14365828 14365865 5 101 9.0 1.0 5.0 0.8 140 chr3R 14365725 intron NK7.1 - chr3R 14365795 intron NK7.1 - chr3R 14365865 intron NK7.1 - chr3R_5_14365001 chr3R_14365001 RAL-392 1878 chr3R 14440703 14440755 chr3R 14440799 14440851 20 91 2.5 5.5 4.0 4.0 148 chr3R 14440703 intron cv-c - chr3R 14440777 intron cv-c - chr3R 14440851 intron cv-c - chr3R_20_14440001 chr3R_14440001 RAL-392 1879 chr3R 14497384 14497420 chr3R 14497485 14497511 9 99 4.0 2.5 3.2 2.1 127 chr3R 14497384 intron CR44177 + chr3R 14497448 intron CR44177 + chr3R 14497511 intron CR44177 + chr3R_9_14495001 chr3R_14495001 RAL-392 1880 chr3R 14497423 14497432 chr3R 14497484 14497533 6 93 2.5 2.5 2.5 1.7 110 chr3R 14497423 intron CR44177 + chr3R 14497478 intron CR44177 + chr3R 14497533 intron CR44177 + chr3R_6_14495001 chr3R_14495001 RAL-392 1881 chr3R 14664854 14664880 chr3R 14664951 14664972 10 94 10.5 3.0 6.8 1.3 118 chr3R 14664854 intergenic BigH1 +,Meltrin - chr3R 14664913 3` UTR Meltrin - chr3R 14664972 3` UTR Meltrin - chr3R_10_14660001 chr3R_14660001 RAL-392 1882 chr3R 14664883 14664907 chr3R 14664950 14665004 5 91 5.5 3.0 4.2 1.0 121 chr3R 14664883 intergenic Meltrin -,BigH1 + chr3R 14664944 3` UTR Meltrin - chr3R 14665004 3` UTR Meltrin - chr3R_5_14660001 chr3R_14660001 RAL-392 1883 chr3R 14704385 14704404 chr3R 14704472 14704501 10 94 9.0 4.0 6.5 1.3 116 chr3R 14704385 intron kibra - chr3R 14704443 intron kibra - chr3R 14704501 intron kibra - chr3R_10_14700001 chr3R_14700001 RAL-392 1884 chr3R 14704405 14704419 chr3R 14704470 14704476 5 71 7.0 4.0 5.5 0.8 71 chr3R 14704405 intron kibra - chr3R 14704440 intron kibra - chr3R 14704476 intron kibra - chr3R_5_14700001 chr3R_14700001 RAL-392 1885 chr3R 14760507 14760549 chr3R 14760618 14760660 8 107 5.5 1.5 3.5 1.8 153 chr3R 14760507 intron jvl + chr3R 14760584 intron jvl + chr3R 14760660 intron jvl + chr3R_8_14760001 chr3R_14760001 RAL-392 1886 chr3R 14806674 14806705 chr3R 14806759 14806762 5 78 5.0 13.5 9.2 0.5 88 chr3R 14806674 3` UTR btsz - chr3R 14806718 3` UTR btsz - chr3R 14806762 3` UTR btsz - chr3R_5_14805001 chr3R_14805001 RAL-392 1887 chr3R 14838710 14838748 chr3R 14838835 14838848 7 120 2.5 1.5 2.0 2.3 138 chr3R 14838710 intron btsz - chr3R 14838779 intron btsz - chr3R 14838848 intron btsz - chr3R_7_14835001 chr3R_14835001 RAL-392 1888 chr3R 14952191 14952213 chr3R 14952351 14952383 6 166 5.0 1.5 3.2 1.4 192 chr3R 14952191 intergenic not near genes chr3R 14952287 intergenic not near genes chr3R 14952383 intergenic not near genes chr3R_6_14950001 chr3R_14950001 RAL-392 1889 chr3R 14952214 14952225 chr3R 14952344 14952348 6 149 3.5 1.0 2.2 1.9 134 chr3R 14952214 intergenic not near genes chr3R 14952281 intergenic not near genes chr3R 14952348 intergenic not near genes chr3R_6_14950001 chr3R_14950001 RAL-392 1890 chr3R 15004188 15004223 chr3R 15004288 15004304 8 97 4.5 4.5 4.5 1.5 116 chr3R 15004188 intergenic CR45599 - chr3R 15004246 intergenic CR45599 - chr3R 15004304 3` UTR CR45599 - chr3R_8_15000001 chr3R_15000001 RAL-392 1891 chr3R 15041405 15041418 chr3R 15045209 15045217 Doc 7 3803 0.0 4.0 2.0 2.3 3812 chr3R 15041405 intergenic not near genes chr3R 15043311 intergenic not near genes chr3R 15045217 intergenic not near genes chr3R_7_15040001 chr3R_15040001 RAL-392 1892 chr3R 15059268 15059478 chr3R 15059499 15059585 BS 4 204 0.0 0.0 0.0 4.0 317 chr3R 15059268 intron dpr9 - chr3R 15059426 intron dpr9 - chr3R 15059585 intron dpr9 - chr3R_4_15055001 chr3R_15055001 RAL-392 1893 chr3R 15071168 15071220 chr3R 15071313 15071360 15 139 2.5 10.5 6.5 2.0 192 chr3R 15071168 intron dpr9 - chr3R 15071264 intron dpr9 - chr3R 15071360 intron dpr9 - chr3R_15_15070001 chr3R_15070001 RAL-392 1894 chr3R 15075954 15075987 chr3R 15076060 15076093 9 102 1.0 7.0 4.0 1.8 139 chr3R 15075954 intron dpr9 - chr3R 15076024 intron dpr9 - chr3R 15076093 intron dpr9 - chr3R_9_15075001 chr3R_15075001 RAL-392 1895 chr3R 15079803 15079834 chr3R 15080048 15080081 pogo 15 253 6.0 0.0 3.0 3.8 278 chr3R 15079803 3` UTR CG6966 - chr3R 15079942 3` UTR CG6966 - chr3R 15080081 3` UTR CG6966 - chr3R_15_15075001 chr3R_15075001 RAL-392 1896 chr3R 15102472 15102505 chr3R 15109751 15109784 412 13 7278 4.5 4.0 4.2 2.5 7312 chr3R 15102472 intron CG42788 - chr3R 15106128 intron CG42788 - chr3R 15109784 intron CG42788 - chr3R_13_15105001 chr3R_15105001 RAL-392 1897 chr3R 15114895 15114948 chr3R 15114991 15115024 8 91 3.0 4.5 3.8 1.7 129 chr3R 15114895 intron CG42788 - chr3R 15114960 intron CG42788 - chr3R 15115024 intron CG42788 - chr3R_8_15110001 chr3R_15110001 RAL-392 1898 chr3R 15132061 15132078 chr3R 15135119 15135148 Juan 5 3066 6.5 8.5 7.5 0.6 3087 chr3R 15132061 intergenic CG42788 - chr3R 15133604 intergenic not near genes chr3R 15135148 3` UTR CG6912 - chr3R_5_15130001 chr3R_15130001 RAL-392 1899 chr3R 15302216 15302245 chr3R 15302322 15302331 4 94 6.5 7.0 6.8 0.5 115 chr3R 15302216 intron Tm1 + chr3R 15302274 intron Tm1 + chr3R 15302331 intron Tm1 + chr3R_4_15300001 chr3R_15300001 RAL-392 1900 chr3R 15406130 15406151 chr3R 15406227 15406252 5 100 18.0 7.5 12.8 0.4 122 chr3R 15406130 intron CG6125 - chr3R 15406191 intron CG6125 - chr3R 15406252 intron CG6125 - chr3R_5_15405001 chr3R_15405001 RAL-392 1901 chr3R 15406160 15406167 chr3R 15406214 15406268 4 71 13.0 7.5 10.2 0.4 108 chr3R 15406160 intron CG6125 - chr3R 15406214 intron CG6125 - chr3R 15406268 intron CG6125 - chr3R_4_15405001 chr3R_15405001 RAL-392 1902 chr3R 15445890 15445904 chr3R 15445995 15446009 9 104 3.5 0.0 1.8 3.2 119 chr3R 15445890 exon AdamTS-A - chr3R 15445950 intron AdamTS-A - chr3R 15446009 intron AdamTS-A - chr3R_9_15445001 chr3R_15445001 RAL-392 1903 chr3R 15499407 15499458 chr3R 15499520 15499529 7 89 6.0 6.0 6.0 1.0 122 chr3R 15499407 intergenic not near genes chr3R 15499468 intergenic not near genes chr3R 15499529 intergenic not near genes chr3R_7_15495001 chr3R_15495001 RAL-392 1904 chr3R 15504180 15504197 chr3R 15504265 15504307 8 95 14.5 13.0 13.8 0.5 127 chr3R 15504180 intergenic not near genes chr3R 15504244 intergenic not near genes chr3R 15504307 intergenic not near genes chr3R_8_15500001 chr3R_15500001 RAL-392 1905 chr3R 15527600 15527644 chr3R 15527711 15527743 4 106 12.0 12.5 12.2 0.3 143 chr3R 15527600 intergenic not near genes chr3R 15527672 intergenic not near genes chr3R 15527743 intergenic not near genes chr3R_4_15525001 chr3R_15525001 RAL-392 1906 chr3R 15592877 15592918 chr3R 15592981 15593022 6 100 12.5 12.0 12.2 0.5 145 chr3R 15592877 intergenic not near genes chr3R 15592950 intergenic not near genes chr3R 15593022 intergenic not near genes chr3R_6_15590001 chr3R_15590001 RAL-392 1907 chr3R 15594663 15594673 chr3R 15594745 15594772 5 92 0.0 9.0 4.5 0.9 109 chr3R 15594663 intergenic not near genes chr3R 15594718 intergenic not near genes chr3R 15594772 intergenic not near genes chr3R_5_15590001 chr3R_15590001 RAL-392 1908 chr3R 15601155 15601189 chr3R 15608697 15608731 412 6 7540 10.5 12.0 11.2 0.5 7576 chr3R 15601155 intergenic not near genes chr3R 15604943 intergenic not near genes chr3R 15608731 intergenic not near genes chr3R_6_15600001 chr3R_15600001 RAL-392 1909 chr3R 15635189 15635240 chr3R 15635330 15635372 9 133 0.0 4.5 2.2 2.8 183 chr3R 15635189 intergenic CG43335 + chr3R 15635280 intergenic CG43335 + chr3R 15635372 intergenic CG43335 + chr3R_9_15635001 chr3R_15635001 RAL-392 1910 chr3R 15646775 15646789 chr3R 15646878 15646892 8 102 3.0 6.0 4.5 1.5 117 chr3R 15646775 intergenic not near genes chr3R 15646834 intergenic not near genes chr3R 15646892 intergenic not near genes chr3R_8_15645001 chr3R_15645001 RAL-392 1911 chr3R 15646794 15646800 chr3R 15646872 15646903 6 99 2.0 4.0 3.0 1.5 109 chr3R 15646794 intergenic not near genes chr3R 15646848 intergenic not near genes chr3R 15646903 intergenic not near genes chr3R_6_15645001 chr3R_15645001 RAL-392 1912 chr3R 15691188 15691327 chr3R 15691299 15691427 13 104 1.5 2.0 1.8 4.6 239 chr3R 15691188 intergenic not near genes chr3R 15691308 intergenic not near genes chr3R 15691427 intergenic not near genes chr3R_13_15690001 chr3R_15690001 RAL-392 1913 chr3R 15718406 15718448 chr3R 15724756 15724797 5 6349 16.5 20.0 18.2 0.3 6391 chr3R 15718406 intergenic not near genes chr3R 15721602 intergenic not near genes chr3R 15724797 intergenic not near genes chr3R_5_15720001 chr3R_15720001 RAL-392 1914 chr3R 15734175 15734197 chr3R 15734285 15734298 4 104 1.0 5.5 3.2 1.0 123 chr3R 15734175 intergenic not near genes chr3R 15734236 intergenic not near genes chr3R 15734298 intergenic not near genes chr3R_4_15730001 chr3R_15730001 RAL-392 1915 chr3R 15735232 15735235 chr3R 15739972 15739975 F-element 4 4740 2.0 7.0 4.5 0.7 4743 chr3R 15735232 intergenic not near genes chr3R 15737604 intergenic not near genes chr3R 15739975 intergenic not near genes chr3R_4_15735001 chr3R_15735001 RAL-392 1916 chr3R 15811525 15811535 chr3R 15811756 15811779 9 248 2.0 3.0 2.5 2.6 254 chr3R 15811525 intron alpha-Man-IIb + chr3R 15811652 intron,3` UTR alpha-Man-IIb +,CR45211 - chr3R 15811779 intron,3` UTR alpha-Man-IIb +,CR45211 - chr3R_9_15810001 chr3R_15810001 RAL-392 1917 chr3R 15878583 15878616 chr3R 15878683 15878690 5 86 6.5 2.0 4.2 1.0 107 chr3R 15878583 intergenic not near genes chr3R 15878636 intergenic not near genes chr3R 15878690 intergenic not near genes chr3R_5_15875001 chr3R_15875001 RAL-392 1918 chr3R 15950145 15950174 chr3R 15950243 15950267 12 93 5.5 4.5 5.0 2.0 122 chr3R 15950145 intron Sap47 + chr3R 15950206 intron,3` UTR Sap47 +,CG31088 - chr3R 15950267 intron,exon Sap47 +,CG31088 - chr3R_12_15950001 chr3R_15950001 RAL-392 1919 chr3R 15950176 15950192 chr3R 15950239 15950290 5 84 3.5 5.0 4.2 1.0 114 chr3R 15950176 intron Sap47 + chr3R 15950233 intron,3` UTR Sap47 +,CG31088 - chr3R 15950290 intron,exon Sap47 +,CG31088 - chr3R_5_15950001 chr3R_15950001 RAL-392 1920 chr3R 16033399 16033442 chr3R 16033498 16033543 17 100 1.5 3.0 2.2 5.3 144 chr3R 16033399 intron pnr + chr3R 16033471 intron pnr + chr3R 16033543 intron pnr + chr3R_17_16030001 chr3R_16030001 RAL-392 1921 chr3R 16135589 16135623 chr3R 16136737 16136771 9 1146 2.5 8.0 5.2 1.5 1182 chr3R 16135589 intron Sb + chr3R 16136180 intron Sb + chr3R 16136771 intron Sb + chr3R_9_16135001 chr3R_16135001 RAL-392 1922 chr3R 16167810 16167826 chr3R 16167917 16167941 7 113 3.0 3.5 3.2 1.7 131 chr3R 16167810 intron CG6006 + chr3R 16167876 intron CG6006 + chr3R 16167941 exon CG6006 + chr3R_7_16165001 chr3R_16165001 RAL-392 1923 chr3R 16201834 16201847 chr3R 16201895 16201945 6 89 6.5 1.0 3.8 1.2 111 chr3R 16201834 intron CG6126 - chr3R 16201890 intron CG6126 - chr3R 16201945 intron CG6126 - chr3R_6_16200001 chr3R_16200001 RAL-392 1924 chr3R 16225067 16225117 chr3R 16225172 16225205 16 102 3.5 3.0 3.2 3.8 138 chr3R 16225067 intergenic not near genes chr3R 16225136 intergenic not near genes chr3R 16225205 intergenic tara + chr3R_16_16225001 chr3R_16225001 RAL-392 1925 chr3R 16246524 16246557 chr3R 16246620 16246653 9 92 1.0 9.0 5.0 1.5 129 chr3R 16246524 intron tara + chr3R 16246588 intron tara + chr3R 16246653 intron tara + chr3R_9_16245001 chr3R_16245001 RAL-392 1926 chr3R 16253516 16253561 chr3R 16253622 16253666 6 106 0.5 3.0 1.8 2.1 150 chr3R 16253516 intron tara + chr3R 16253591 intron tara + chr3R 16253666 intron tara + chr3R_6_16250001 chr3R_16250001 RAL-392 1927 chr3R 16374290 16374329 chr3R 16374412 16374452 14 125 4.0 1.5 2.8 3.7 162 chr3R 16374290 intergenic ss - chr3R 16374371 intergenic ss - chr3R 16374452 3` UTR ss - chr3R_14_16370001 chr3R_16370001 RAL-392 1928 chr3R 16732129 16732173 chr3R 16732245 16732259 18 112 2.0 1.5 1.8 6.4 130 chr3R 16732129 intron Ubx - chr3R 16732194 intron Ubx - chr3R 16732259 intron Ubx - chr3R_18_16730001 chr3R_16730001 RAL-392 1929 chr3R 16734856 16734877 chr3R 16734959 16734980 4 98 2.0 6.0 4.0 0.8 124 chr3R 16734856 intergenic Ubx - chr3R 16734918 intergenic Ubx - chr3R 16734980 intergenic not near genes chr3R_4_16730001 chr3R_16730001 RAL-392 1930 chr3R 16756331 16756349 chr3R 16762512 16762544 diver 5 6191 3.0 2.5 2.8 1.3 6213 chr3R 16756331 intron bxd - chr3R 16759438 intron bxd - chr3R 16762544 intron bxd - chr3R_5_16755001 chr3R_16755001 RAL-392 1931 chr3R 17147924 17147941 chr3R 17148024 17148041 7 100 7.5 1.0 4.2 1.3 117 chr3R 17147924 intron m-cup - chr3R 17147982 intron m-cup - chr3R 17148041 intron m-cup - chr3R_7_17145001 chr3R_17145001 RAL-392 1932 chr3R 17294652 17294689 chr3R 17295099 17295137 BS 13 444 3.0 2.0 2.5 3.7 485 chr3R 17294652 intergenic not near genes chr3R 17294894 intergenic not near genes chr3R 17295137 intergenic not near genes chr3R_13_17290001 chr3R_17290001 RAL-392 1933 chr3R 17342872 17342922 chr3R 17342971 17342998 8 92 6.0 6.0 6.0 1.1 126 chr3R 17342872 intron beat-IIa - chr3R 17342935 intron beat-IIa - chr3R 17342998 intron beat-IIa - chr3R_8_17340001 chr3R_17340001 RAL-392 1934 chr3R 17346683 17346716 chr3R 17348255 17348262 F-element 10 1570 4.5 3.5 4.0 2.0 1579 chr3R 17346683 intron beat-IIa - chr3R 17347472 intron beat-IIa - chr3R 17348262 intron beat-IIa - chr3R_10_17345001 chr3R_17345001 RAL-392 1935 chr3R 17355472 17355515 chr3R 17355570 17355596 12 89 6.0 3.0 4.5 2.2 124 chr3R 17355472 intron beat-IIa - chr3R 17355534 intron beat-IIa - chr3R 17355596 intron beat-IIa - chr3R_12_17355001 chr3R_17355001 RAL-392 1936 chr3R 17407003 17407027 chr3R 17407110 17407149 9 119 6.0 5.0 5.5 1.4 146 chr3R 17407003 intron CG42798 + chr3R 17407076 5` UTR CG42798 + chr3R 17407149 exon CG42798 + chr3R_9_17405001 chr3R_17405001 RAL-392 1937 chr3R 17461185 17461227 chr3R 17461287 17461329 10 97 3.0 4.0 3.5 2.2 144 chr3R 17461185 intergenic not near genes chr3R 17461257 intergenic not near genes chr3R 17461329 intergenic not near genes chr3R_10_17460001 chr3R_17460001 RAL-392 1938 chr3R 17497942 17497991 chr3R 17498048 17498097 17 104 3.0 8.0 5.5 2.6 155 chr3R 17497942 intron Dscam3 - chr3R 17498020 intron Dscam3 - chr3R 17498097 intron Dscam3 - chr3R_17_17495001 chr3R_17495001 RAL-392 1939 chr3R 17507445 17507478 chr3R 17507535 17507536 13 90 3.5 7.5 5.5 2.0 91 chr3R 17507445 intergenic not near genes chr3R 17507490 intergenic not near genes chr3R 17507536 intergenic not near genes chr3R_13_17505001 chr3R_17505001 RAL-392 1940 chr3R 17638297 17638305 chr3R 17638803 17638811 roo 5 506 18.0 6.5 12.2 0.4 514 chr3R 17638297 intron CG43175 + chr3R 17638554 intron CG43175 + chr3R 17638811 intron,intron CG43175 +,CR45222 + chr3R_5_17635001 chr3R_17635001 RAL-392 1941 chr3R 17638307 17638344 chr3R 17638802 17638850 roo 20 500 7.5 6.5 7.0 2.5 543 chr3R 17638307 intron CG43175 + chr3R 17638578 intron CG43175 + chr3R 17638850 intron,intron CG43175 +,CR45222 + chr3R_20_17635001 chr3R_17635001 RAL-392 1942 chr3R 17725056 17725078 chr3R 17725170 17725186 7 111 6.0 1.5 3.8 1.5 130 chr3R 17725056 intergenic Atg8b - chr3R 17725121 intergenic Atg8b - chr3R 17725186 intergenic Atg8b - chr3R_7_17725001 chr3R_17725001 RAL-392 1943 chr3R 17734823 17734859 chr3R 17734956 17734967 8 130 6.0 4.0 5.0 1.3 144 chr3R 17734823 intergenic CG14321 + chr3R 17734895 intergenic not near genes chr3R 17734967 intergenic not near genes chr3R_8_17730001 chr3R_17730001 RAL-392 1944 chr3R 17766565 17766587 chr3R 17766689 17766691 8 119 7.5 6.0 6.8 1.0 126 chr3R 17766565 intergenic not near genes chr3R 17766628 intergenic not near genes chr3R 17766691 intergenic not near genes chr3R_8_17765001 chr3R_17765001 RAL-392 1945 chr3R 17773355 17773387 chr3R 17773470 17773501 12 113 6.5 6.0 6.2 1.7 146 chr3R 17773355 exon CG43102 - chr3R 17773428 intron CG43102 - chr3R 17773501 exon CG43102 - chr3R_12_17770001 chr3R_17770001 RAL-392 1946 chr3R 17820284 17820315 chr3R 17820383 17820407 6 98 3.5 2.0 2.8 1.6 123 chr3R 17820284 intron tinc + chr3R 17820346 intron tinc + chr3R 17820407 intron tinc + chr3R_6_17820001 chr3R_17820001 RAL-392 1947 chr3R 17823196 17823233 chr3R 17823301 17823322 13 102 5.0 4.5 4.8 2.2 126 chr3R 17823196 intron tinc + chr3R 17823259 intron tinc + chr3R 17823322 intron tinc + chr3R_13_17820001 chr3R_17820001 RAL-392 1948 chr3R 17913104 17913114 chr3R 17913219 17913228 4 115 1.0 3.0 2.0 1.3 124 chr3R 17913104 intron Rim - chr3R 17913166 intron Rim - chr3R 17913228 intron Rim - chr3R_4_17910001 chr3R_17910001 RAL-392 1949 chr3R 17925846 17925888 chr3R 17927323 17927365 hobo 11 1470 1.5 7.5 4.5 2.0 1519 chr3R 17925846 intron cpo + chr3R 17926606 intron cpo + chr3R 17927365 intron cpo + chr3R_11_17925001 chr3R_17925001 RAL-392 1950 chr3R 17991660 17991711 chr3R 17991904 17991905 18 231 4.5 7.0 5.8 2.6 245 chr3R 17991660 intron cpo + chr3R 17991782 intron cpo + chr3R 17991905 intron cpo + chr3R_18_17990001 chr3R_17990001 RAL-392 1951 chr3R 18041756 18041772 chr3R 18041832 18041849 5 78 3.0 5.0 4.0 1.0 93 chr3R 18041756 intergenic not near genes chr3R 18041802 intergenic not near genes chr3R 18041849 intergenic not near genes chr3R_5_18040001 chr3R_18040001 RAL-392 1952 chr3R 18061426 18061459 chr3R 18061538 18061558 9 108 3.5 0.0 1.8 3.2 132 chr3R 18061426 intergenic not near genes chr3R 18061492 intergenic not near genes chr3R 18061558 intergenic not near genes chr3R_9_18060001 chr3R_18060001 RAL-392 1953 chr3R 18061558 18061589 chr3R 18063147 18063153 F-element 5 1572 0.0 0.0 0.0 5.0 1595 chr3R 18061558 intergenic not near genes chr3R 18062356 intergenic not near genes chr3R 18063153 intergenic not near genes chr3R_5_18060001 chr3R_18060001 RAL-392 1954 chr3R 18067961 18068011 chr3R 18068077 18068113 7 108 4.0 4.5 4.2 1.3 152 chr3R 18067961 intergenic not near genes chr3R 18068037 intergenic not near genes chr3R 18068113 intergenic not near genes chr3R_7_18065001 chr3R_18065001 RAL-392 1955 chr3R 18078134 18078160 chr3R 18078233 18078256 4 93 7.5 0.0 3.8 0.8 122 chr3R 18078134 intergenic not near genes chr3R 18078195 intergenic not near genes chr3R 18078256 intergenic not near genes chr3R_4_18075001 chr3R_18075001 RAL-392 1956 chr3R 18107118 18107140 chr3R 18107214 18107227 5 94 3.0 6.0 4.5 0.9 109 chr3R 18107118 intron sr + chr3R 18107172 intron sr + chr3R 18107227 intron sr + chr3R_5_18105001 chr3R_18105001 RAL-392 1957 chr3R 18112358 18112382 chr3R 18112461 18112485 4 102 20.5 25.0 22.8 0.2 127 chr3R 18112358 intron sr + chr3R 18112422 intron sr + chr3R 18112485 intron sr + chr3R_4_18110001 chr3R_18110001 RAL-392 1958 chr3R 18143558 18143589 chr3R 18143667 18143698 13 109 2.5 8.0 5.2 2.1 140 chr3R 18143558 intergenic not near genes chr3R 18143628 intergenic not near genes chr3R 18143698 intergenic not near genes chr3R_13_18140001 chr3R_18140001 RAL-392 1959 chr3R 18157465 18157619 chr3R 18157528 18157745 7 118 1.0 0.0 0.5 4.7 280 chr3R 18157465 intergenic CR45103 + chr3R 18157605 intergenic CR45103 + chr3R 18157745 5` UTR CR45103 + chr3R_7_18155001 chr3R_18155001 RAL-392 1960 chr3R 18235193 18235226 chr3R 18235389 18235399 14 187 16.0 5.0 10.5 1.2 206 chr3R 18235193 intergenic not near genes chr3R 18235296 intergenic not near genes chr3R 18235399 intergenic not near genes chr3R_14_18235001 chr3R_18235001 RAL-392 1961 chr3R 18235229 18235245 chr3R 18235388 18235441 8 188 7.5 5.0 6.2 1.1 212 chr3R 18235229 intergenic not near genes chr3R 18235335 intergenic not near genes chr3R 18235441 intergenic not near genes chr3R_8_18235001 chr3R_18235001 RAL-392 1962 chr3R 18302974 18302983 chr3R 18303099 18303108 6 124 1.5 0.0 0.8 3.3 134 chr3R 18302974 intergenic CG7126 -,PKD - chr3R 18303041 intergenic CG7126 -,PKD - chr3R 18303108 intergenic PKD -,CG7126 - chr3R_6_18300001 chr3R_18300001 RAL-392 1963 chr3R 18338983 18339023 chr3R 18339107 18339147 15 122 3.5 7.0 5.2 2.4 164 chr3R 18338983 intron CG15803 - chr3R 18339065 intron CG15803 - chr3R 18339147 intron CG15803 - chr3R_15_18335001 chr3R_18335001 RAL-392 1964 chr3R 18434004 18434035 chr3R 18434103 18434106 5 93 4.5 0.5 2.5 1.4 102 chr3R 18434004 intron fru - chr3R 18434055 intron fru - chr3R 18434106 intron fru - chr3R_5_18430001 chr3R_18430001 RAL-392 1965 chr3R 18472272 18472288 chr3R 18472393 18472409 4 118 11.0 4.5 7.8 0.5 137 chr3R 18472272 intron fru - chr3R 18472340 intron fru - chr3R 18472409 intron fru - chr3R_4_18470001 chr3R_18470001 RAL-392 1966 chr3R 18473226 18473246 chr3R 18473333 18473353 4 107 0.0 0.5 0.2 3.3 127 chr3R 18473226 intron fru - chr3R 18473290 intron fru - chr3R 18473353 intron fru - chr3R_4_18470001 chr3R_18470001 RAL-392 1967 chr3R 18481050 18481068 chr3R 18481141 18481185 5 106 3.5 10.0 6.8 0.6 135 chr3R 18481050 intron fru - chr3R 18481118 intron fru - chr3R 18481185 intron fru - chr3R_5_18480001 chr3R_18480001 RAL-392 1968 chr3R 18501582 18501627 chr3R 18501683 18501714 19 98 5.5 7.5 6.5 2.5 132 chr3R 18501582 intron fru - chr3R 18501648 intron fru - chr3R 18501714 intron fru - chr3R_19_18500001 chr3R_18500001 RAL-392 1969 chr3R 18528347 18528397 chr3R 18528454 18528457 15 92 4.0 6.0 5.0 2.5 110 chr3R 18528347 intron fru - chr3R 18528402 intron fru - chr3R 18528457 intron fru - chr3R_15_18525001 chr3R_18525001 RAL-392 1970 chr3R 18606510 18606528 chr3R 18610734 18610768 F-element 6 4245 2.5 4.5 3.5 1.3 4258 chr3R 18606510 intron,intron qin +,CG14304 - chr3R 18608639 intron,intron qin +,CG14304 - chr3R 18610768 intron,intron qin +,CG14304 - chr3R_6_18605001 chr3R_18605001 RAL-392 1971 chr3R 18628857 18628871 chr3R 18629001 18629005 4 139 0.0 5.5 2.8 1.1 148 chr3R 18628857 intron qin + chr3R 18628931 intron qin + chr3R 18629005 intron qin + chr3R_4_18625001 chr3R_18625001 RAL-392 1972 chr3R 18695744 18695776 chr3R 18695848 18695854 4 96 4.5 0.0 2.2 1.2 110 chr3R 18695744 3` UTR CG34282 + chr3R 18695799 intergenic CG34282 + chr3R 18695854 intergenic CG34282 + chr3R_4_18695001 chr3R_18695001 RAL-392 1973 chr3R 18720310 18720339 chr3R 18720401 18720445 6 97 1.5 1.5 1.5 2.4 135 chr3R 18720310 intron Cha + chr3R 18720378 intron Cha + chr3R 18720445 intron Cha + chr3R_6_18720001 chr3R_18720001 RAL-392 1974 chr3R 18770277 18770298 chr3R 18770379 18770400 9 100 16.0 6.5 11.2 0.7 123 chr3R 18770277 intron CG7720 - chr3R 18770338 intron CG7720 - chr3R 18770400 intron CG7720 - chr3R_9_18770001 chr3R_18770001 RAL-392 1975 chr3R 18770303 18770318 chr3R 18770377 18770408 6 91 9.0 5.5 7.2 0.7 105 chr3R 18770303 intron CG7720 - chr3R 18770356 intron CG7720 - chr3R 18770408 intron CG7720 - chr3R_6_18770001 chr3R_18770001 RAL-392 1976 chr3R 18785860 18785898 chr3R 18785946 18785995 13 83 9.5 11.0 10.2 1.2 135 chr3R 18785860 intron CG7720 - chr3R 18785928 intron CG7720 - chr3R 18785995 intron CG7720 - chr3R_13_18785001 chr3R_18785001 RAL-392 1977 chr3R 18792825 18792835 chr3R 18792886 18792930 4 89 0.5 0.0 0.2 3.3 105 chr3R 18792825 intron CG7720 - chr3R 18792878 intron CG7720 - chr3R 18792930 intron CG7720 - chr3R_4_18790001 chr3R_18790001 RAL-392 1978 chr3R 18807310 18807328 chr3R 18807406 18807424 7 96 1.0 0.0 0.5 4.7 114 chr3R 18807310 intron CG18208 - chr3R 18807367 intron CG18208 - chr3R 18807424 intron CG18208 - chr3R_7_18805001 chr3R_18805001 RAL-392 1979 chr3R 18876955 18877008 chr3R 18877053 18877106 20 97 3.5 2.5 3.0 5.0 151 chr3R 18876955 3` UTR CG14298 + chr3R 18877030 3` UTR CG14298 + chr3R 18877106 3` UTR CG14298 + chr3R_20_18875001 chr3R_18875001 RAL-392 1980 chr3R 18885920 18885965 chr3R 18886013 18886021 11 83 1.0 0.5 0.8 6.1 101 chr3R 18885920 intergenic not near genes chr3R 18885970 intergenic not near genes chr3R 18886021 intergenic not near genes chr3R_11_18885001 chr3R_18885001 RAL-392 1981 chr3R 18887583 18887598 chr3R 18887684 18887696 6 99 8.5 11.0 9.8 0.6 113 chr3R 18887583 intergenic not near genes chr3R 18887640 intergenic not near genes chr3R 18887696 intergenic not near genes chr3R_6_18885001 chr3R_18885001 RAL-392 1982 chr3R 19106831 19106837 chr3R 19106911 19106918 1360 4 80 7.5 0.5 4.0 0.8 87 chr3R 19106831 intron CG6040 + chr3R 19106874 intron CG6040 + chr3R 19106918 intron CG6040 + chr3R_4_19105001 chr3R_19105001 RAL-392 1983 chr3R 19136408 19136428 chr3R 19139780 19139805 Bari1 9 3372 55.0 36.0 45.5 0.2 3397 chr3R 19136408 exon Cyp12a4 + chr3R 19138106 intergenic not near genes chr3R 19139805 3` UTR Ppcs - chr3R_9_19135001 chr3R_19135001 RAL-392 1984 chr3R 19140272 19140297 chr3R 19140710 19140760 9 454 4.0 2.5 3.2 2.1 488 chr3R 19140272 3` UTR Ppcs - chr3R 19140516 3` UTR Ppcs - chr3R 19140760 3` UTR Ppcs - chr3R_9_19140001 chr3R_19140001 RAL-392 1985 chr3R 19248868 19248899 chr3R 19248952 19248964 7 76 2.0 0.0 1.0 3.5 96 chr3R 19248868 intergenic not near genes chr3R 19248916 intergenic not near genes chr3R 19248964 intergenic not near genes chr3R_7_19245001 chr3R_19245001 RAL-392 1986 chr3R 19340390 19340427 chr3R 19340487 19340524 7 92 4.5 5.5 5.0 1.2 134 chr3R 19340390 intergenic not near genes chr3R 19340457 intergenic not near genes chr3R 19340524 intergenic not near genes chr3R_7_19340001 chr3R_19340001 RAL-392 1987 chr3R 19494393 19494412 chr3R 19494493 19494495 6 97 8.5 6.5 7.5 0.7 102 chr3R 19494393 intron Dys + chr3R 19494444 intron Dys + chr3R 19494495 intron Dys + chr3R_6_19490001 chr3R_19490001 RAL-392 1988 chr3R 19602737 19602790 chr3R 19602835 19602878 16 93 5.5 5.0 5.2 2.6 141 chr3R 19602737 intergenic CG7333 + chr3R 19602808 intergenic CG7333 + chr3R 19602878 intergenic CG7333 +,CG7342 + chr3R_16_19600001 chr3R_19600001 RAL-392 1989 chr3R 19628276 19628326 chr3R 19628447 19628497 14 166 4.0 3.0 3.5 3.1 221 chr3R 19628276 intron CG6231 - chr3R 19628386 intron CG6231 - chr3R 19628497 intron CG6231 - chr3R_14_19625001 chr3R_19625001 RAL-392 1990 chr3R 19633295 19633321 chr3R 19633381 19633390 8 96 0.5 5.0 2.8 2.1 95 chr3R 19633295 intergenic subdued - chr3R 19633342 intergenic subdued - chr3R 19633390 intergenic subdued - chr3R_8_19630001 chr3R_19630001 RAL-392 1991 chr3R 19651709 19651755 chr3R 19651805 19651811 21 92 8.5 3.5 6.0 3.0 102 chr3R 19651709 exon CG31219 + chr3R 19651760 exon CG31219 + chr3R 19651811 exon CG31219 + chr3R_21_19650001 chr3R_19650001 RAL-392 1992 chr3R 19825022 19825038 chr3R 19825113 19825134 9 99 3.5 2.0 2.8 2.4 112 chr3R 19825022 intron bnl - chr3R 19825078 intron bnl - chr3R 19825134 intron bnl - chr3R_9_19825001 chr3R_19825001 RAL-392 1993 chr3R 19953928 19953982 chr3R 19954025 19954033 4 74 1.5 5.0 3.2 1.0 105 chr3R 19953928 intron Hs6st - chr3R 19953980 intron Hs6st - chr3R 19954033 intron Hs6st - chr3R_4_19950001 chr3R_19950001 RAL-392 1994 chr3R 19964996 19965043 chr3R 19965105 19965152 12 100 3.5 4.5 4.0 2.4 156 chr3R 19964996 intron Hs6st - chr3R 19965074 intron Hs6st - chr3R 19965152 intron Hs6st - chr3R_12_19965001 chr3R_19965001 RAL-392 1995 chr3R 20109540 20109568 chr3R 20114766 20114791 copia 10 5222 0.0 12.0 6.0 1.4 5251 chr3R 20109540 intergenic not near genes chr3R 20112166 intergenic not near genes chr3R 20114791 intergenic CG10887 + chr3R_10_20110001 chr3R_20110001 RAL-392 1996 chr3R 20156676 20156701 chr3R 20165866 20165876 roo 4 9182 5.5 8.0 6.8 0.5 9200 chr3R 20156676 intergenic not near genes chr3R 20161276 intergenic not near genes chr3R 20165876 intergenic not near genes chr3R_4_20160001 chr3R_20160001 RAL-392 1997 chr3R 20156705 20156721 chr3R 20165860 20165880 roo 8 9181 5.0 6.5 5.8 1.2 9175 chr3R 20156705 intergenic not near genes chr3R 20161292 intergenic not near genes chr3R 20165880 intergenic not near genes chr3R_8_20160001 chr3R_20160001 RAL-392 1998 chr3R 20190535 20190570 chr3R 20190644 20190679 7 107 6.0 2.5 4.2 1.3 144 chr3R 20190535 intergenic not near genes chr3R 20190607 intergenic not near genes chr3R 20190679 intergenic not near genes chr3R_7_20190001 chr3R_20190001 RAL-392 1999 chr3R 20190574 20190590 chr3R 20190643 20190679 5 90 2.5 2.5 2.5 1.4 105 chr3R 20190574 intergenic not near genes chr3R 20190626 intergenic not near genes chr3R 20190679 intergenic not near genes chr3R_5_20190001 chr3R_20190001 RAL-392 2000 chr3R 20205423 20205595 chr3R 20205560 20205737 12 140 3.0 12.0 7.5 1.4 314 chr3R 20205423 intron Nlg4 + chr3R 20205580 intron Nlg4 + chr3R 20205737 intron Nlg4 + chr3R_12_20205001 chr3R_20205001 RAL-392 2001 chr3R 20256846 20256855 chr3R 20256928 20256953 7 93 0.0 8.5 4.2 1.3 107 chr3R 20256846 intron cic + chr3R 20256900 intron cic + chr3R 20256953 intron cic + chr3R_7_20255001 chr3R_20255001 RAL-392 2002 chr3R 20266504 20266548 chr3R 20272995 20273019 Burdock 18 6488 1.5 6.5 4.0 3.6 6515 chr3R 20266504 intron cic + chr3R 20269762 intron cic + chr3R 20273019 intron cic + chr3R_18_20265001 chr3R_20265001 RAL-392 2003 chr3R 20282273 20282307 chr3R 20282369 20282403 16 94 0.5 2.5 1.5 6.4 130 chr3R 20282273 intron cic + chr3R 20282338 intron cic + chr3R 20282403 intron cic + chr3R_16_20280001 chr3R_20280001 RAL-392 2004 chr3R 20309003 20309003 chr3R 20309064 20309095 4 74 8.5 2.0 5.2 0.6 92 chr3R 20309003 intergenic CG42668 + chr3R 20309049 intergenic CG42668 + chr3R 20309095 intergenic CG42668 + chr3R_4_20305001 chr3R_20305001 RAL-392 2005 chr3R 20330982 20331025 chr3R 20331483 20331531 roo 18 504 8.0 3.0 5.5 2.8 549 chr3R 20330982 intergenic Sirt2 + chr3R 20331256 intergenic Sirt2 + chr3R 20331531 intergenic not near genes chr3R_18_20330001 chr3R_20330001 RAL-392 2006 chr3R 20389673 20389726 chr3R 20389775 20389828 15 101 3.0 1.5 2.2 4.7 155 chr3R 20389673 intron Gfrl - chr3R 20389750 intron Gfrl - chr3R 20389828 intron Gfrl - chr3R_15_20385001 chr3R_20385001 RAL-392 2007 chr3R 20434826 20434864 chr3R 20435031 20435069 8 205 3.0 1.0 2.0 2.7 243 chr3R 20434826 intron Gfrl - chr3R 20434948 intron Gfrl - chr3R 20435069 intron Gfrl - chr3R_8_20430001 chr3R_20430001 RAL-392 2008 chr3R 20450133 20450138 chr3R 20450205 20450243 4 97 0.0 0.0 0.0 4.0 110 chr3R 20450133 intron Gfrl - chr3R 20450188 intron Gfrl - chr3R 20450243 intron Gfrl - chr3R_4_20450001 chr3R_20450001 RAL-392 2009 chr3R 20467095 20467103 chr3R 20467166 20467179 5 80 3.5 2.5 3.0 1.2 84 chr3R 20467095 intron Gfrl - chr3R 20467137 intron Gfrl - chr3R 20467179 intron Gfrl - chr3R_5_20465001 chr3R_20465001 RAL-392 2010 chr3R 20504189 20504222 chr3R 20505547 20505577 6 1360 4.0 4.0 4.0 1.2 1388 chr3R 20504189 intergenic not near genes chr3R 20504883 exon Or92a + chr3R 20505577 exon Or92a + chr3R_6_20500001 chr3R_20500001 RAL-392 2011 chr3R 20506578 20506598 chr3R 20507401 20507421 BS 6 820 3.5 12.5 8.0 0.7 843 chr3R 20506578 intergenic Or92a + chr3R 20507000 intergenic CG4288 - chr3R 20507421 3` UTR CG4288 - chr3R_6_20505001 chr3R_20505001 RAL-392 2012 chr3R 20506601 20506605 chr3R 20507393 20507407 BS 5 796 3.0 7.0 5.0 0.8 806 chr3R 20506601 intergenic Or92a + chr3R 20507004 intergenic CG4288 - chr3R 20507407 3` UTR CG4288 - chr3R_5_20505001 chr3R_20505001 RAL-392 2013 chr3R 20512996 20513033 chr3R 20515708 20515756 opus 10 2721 2.0 0.0 1.0 5.0 2760 chr3R 20512996 intergenic not near genes chr3R 20514376 intergenic not near genes chr3R 20515756 intergenic not near genes chr3R_10_20510001 chr3R_20510001 RAL-392 2014 chr3R 20520821 20520835 chr3R 20521041 20521069 4 227 41.5 32.5 37.0 0.1 248 chr3R 20520821 intergenic not near genes chr3R 20520945 intergenic not near genes chr3R 20521069 intergenic not near genes chr3R_4_20520001 chr3R_20520001 RAL-392 2015 chr3R 20555492 20555541 chr3R 20555821 20555840 11 317 5.5 4.0 4.8 1.9 348 chr3R 20555492 intron att-ORFA - chr3R 20555666 intron att-ORFA - chr3R 20555840 intron att-ORFA - chr3R_11_20555001 chr3R_20555001 RAL-392 2016 chr3R 20564134 20564156 chr3R 20564491 20564509 7 362 1.5 5.0 3.2 1.7 375 chr3R 20564134 intron CG5191 + chr3R 20564322 intron CG5191 + chr3R 20564509 intron CG5191 + chr3R_7_20560001 chr3R_20560001 RAL-392 2017 chr3R 20596179 20596191 chr3R 20596286 20596298 5 107 9.5 8.5 9.0 0.5 119 chr3R 20596179 intron bon + chr3R 20596238 intron bon + chr3R 20596298 intron bon + chr3R_5_20595001 chr3R_20595001 RAL-392 2018 chr3R 20596194 20596214 chr3R 20596281 20596321 10 97 6.5 6.5 6.5 1.3 127 chr3R 20596194 intron bon + chr3R 20596258 intron bon + chr3R 20596321 intron bon + chr3R_10_20595001 chr3R_20595001 RAL-392 2019 chr3R 20669856 20669897 chr3R 20669955 20669998 14 95 5.5 11.5 8.5 1.5 142 chr3R 20669856 intron Cpr92F + chr3R 20669927 intron Cpr92F + chr3R 20669998 intron Cpr92F + chr3R_14_20665001 chr3R_20665001 RAL-392 2020 chr3R 20684195 20684243 chr3R 20684299 20684338 15 102 12.5 13.0 12.8 1.1 143 chr3R 20684195 intergenic not near genes chr3R 20684266 intergenic not near genes chr3R 20684338 intergenic not near genes chr3R_15_20680001 chr3R_20680001 RAL-392 2021 chr3R 20703482 20703511 chr3R 20703896 20703900 5 404 15.5 23.0 19.2 0.2 418 chr3R 20703482 intron Oamb - chr3R 20703691 intron Oamb - chr3R 20703900 intron Oamb - chr3R_5_20700001 chr3R_20700001 RAL-392 2022 chr3R 20771705 20771713 chr3R 20771800 20771814 5 94 1.5 10.5 6.0 0.7 109 chr3R 20771705 intron,intron Syp +,Takl1 - chr3R 20771760 intron,intron Syp +,Takl1 - chr3R 20771814 intron,exon Syp +,Takl1 - chr3R_5_20770001 chr3R_20770001 RAL-392 2023 chr3R 20787431 20787451 chr3R 20787542 20787562 4 110 4.0 6.5 5.2 0.6 131 chr3R 20787431 intron Syp + chr3R 20787496 intron Syp + chr3R 20787562 intron Syp + chr3R_4_20785001 chr3R_20785001 RAL-392 2024 chr3R 20850077 20850111 chr3R 20850182 20850216 11 103 1.5 5.0 3.2 2.6 139 chr3R 20850077 intergenic RpS30 + chr3R 20850146 intergenic RpS30 + chr3R 20850216 intergenic RpS30 + chr3R_11_20850001 chr3R_20850001 RAL-392 2025 chr3R 20901334 20901369 chr3R 20901428 20901464 5 88 6.0 4.0 5.0 0.8 130 chr3R 20901334 intergenic not near genes chr3R 20901399 intergenic not near genes chr3R 20901464 intergenic CG5621 + chr3R_5_20900001 chr3R_20900001 RAL-392 2026 chr3R 20995746 20995797 chr3R 20995878 20995921 7 130 3.5 4.5 4.0 1.4 175 chr3R 20995746 intron Calx + chr3R 20995834 intron Calx + chr3R 20995921 intron Calx + chr3R_7_20995001 chr3R_20995001 RAL-392 2027 chr3R 21013997 21014032 chr3R 21014095 21014095 4 87 24.0 21.5 22.8 0.2 98 chr3R 21013997 3` UTR Calx + chr3R 21014046 3` UTR Calx + chr3R 21014095 3` UTR Calx + chr3R_4_21010001 chr3R_21010001 RAL-392 2028 chr3R 21020378 21020428 chr3R 21020474 21020518 8 92 14.0 11.0 12.5 0.6 140 chr3R 21020378 3` UTR Rlip + chr3R 21020448 3` UTR Rlip + chr3R 21020518 3` UTR Rlip + chr3R_8_21020001 chr3R_21020001 RAL-392 2029 chr3R 21141664 21141706 chr3R 21150159 21150162 Tirant 4 8473 2.0 4.0 3.0 1.0 8498 chr3R 21141664 intron SNF4Agamma + chr3R 21145913 intron SNF4Agamma + chr3R 21150162 intron SNF4Agamma + chr3R_4_21145001 chr3R_21145001 RAL-392 2030 chr3R 21188045 21188086 chr3R 21188175 21188215 8 121 0.0 1.0 0.5 5.3 170 chr3R 21188045 intron SNF4Agamma + chr3R 21188130 intron SNF4Agamma + chr3R 21188215 intron SNF4Agamma + chr3R_8_21185001 chr3R_21185001 RAL-392 2031 chr3R 21240441 21240449 chr3R 21240550 21240561 5 107 0.5 6.5 3.5 1.1 120 chr3R 21240441 intergenic not near genes chr3R 21240501 intergenic not near genes chr3R 21240561 intergenic not near genes chr3R_5_21240001 chr3R_21240001 RAL-392 2032 chr3R 21240456 21240478 chr3R 21240546 21240590 9 104 0.5 5.5 3.0 2.2 134 chr3R 21240456 intergenic not near genes chr3R 21240523 intergenic not near genes chr3R 21240590 intergenic not near genes chr3R_9_21240001 chr3R_21240001 RAL-392 2033 chr3R 21245838 21245866 chr3R 21245942 21245970 12 102 6.0 9.0 7.5 1.4 132 chr3R 21245838 intergenic CG5892 + chr3R 21245904 intergenic CG5892 + chr3R 21245970 intergenic not near genes chr3R_12_21245001 chr3R_21245001 RAL-392 2034 chr3R 21343806 21343839 chr3R 21343919 21343952 10 110 4.0 4.0 4.0 2.0 146 chr3R 21343806 intron CG16791 - chr3R 21343879 intron CG16791 - chr3R 21343952 intron CG16791 - chr3R_10_21340001 chr3R_21340001 RAL-392 2035 chr3R 21517998 21518017 chr3R 21518147 21518166 8 149 7.5 0.0 3.8 1.7 168 chr3R 21517998 intergenic not near genes chr3R 21518082 intergenic not near genes chr3R 21518166 intergenic not near genes chr3R_8_21515001 chr3R_21515001 RAL-392 2036 chr3R 21519978 21520132 chr3R 21520089 21520244 15 116 1.5 0.5 1.0 7.5 266 chr3R 21519978 intergenic not near genes chr3R 21520111 intergenic not near genes chr3R 21520244 intergenic not near genes chr3R_15_21520001 chr3R_21520001 RAL-392 2037 chr3R 21624085 21624119 chr3R 21624199 21624223 5 108 2.5 0.5 1.5 2.0 138 chr3R 21624085 exon E2f - chr3R 21624154 intron E2f - chr3R 21624223 intron E2f - chr3R_5_21620001 chr3R_21620001 RAL-392 2038 chr3R 21651219 21651266 chr3R 21651317 21651358 15 93 5.5 3.5 4.5 2.7 139 chr3R 21651219 intron E2f - chr3R 21651288 intron E2f - chr3R 21651358 intron E2f - chr3R_15_21650001 chr3R_21650001 RAL-392 2039 chr3R 21725654 21725691 chr3R 21725810 21725847 17 155 0.0 0.0 0.0 17.0 193 chr3R 21725654 intergenic not near genes chr3R 21725750 intergenic not near genes chr3R 21725847 intergenic not near genes chr3R_17_21725001 chr3R_21725001 RAL-392 2040 chr3R 21734844 21734885 chr3R 21734940 21734959 8 86 4.0 0.0 2.0 2.7 115 chr3R 21734844 intergenic not near genes chr3R 21734902 intergenic not near genes chr3R 21734959 intergenic not near genes chr3R_8_21730001 chr3R_21730001 RAL-392 2041 chr3R 21784851 21784859 chr3R 21784969 21784977 7 117 9.5 0.0 4.8 1.2 126 chr3R 21784851 3` UTR,3` UTR CASK -,CRG - chr3R 21784914 3` UTR,3` UTR CASK -,CRG - chr3R 21784977 3` UTR,3` UTR CASK -,CRG - chr3R_7_21780001 chr3R_21780001 RAL-392 2042 chr3R 21784860 21784869 chr3R 21784966 21784970 7 109 8.5 0.0 4.2 1.3 110 chr3R 21784860 3` UTR,3` UTR CASK -,CRG - chr3R 21784915 3` UTR,3` UTR CASK -,CRG - chr3R 21784970 3` UTR,3` UTR CASK -,CRG - chr3R_7_21780001 chr3R_21780001 RAL-392 2043 chr3R 21815254 21815281 chr3R 21815482 21815519 5 230 1.5 7.5 4.5 0.9 265 chr3R 21815254 intron CASK - chr3R 21815386 intron CASK - chr3R 21815519 intron CASK - chr3R_5_21815001 chr3R_21815001 RAL-392 2044 chr3R 21907535 21907535 chr3R 28831801 28831802 4 6924266 21.5 9.5 15.5 0.2 6924267 chr3R 21907535 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_4_25365001 chr3R_25365001 RAL-392 2045 chr3R 21907536 21907536 chr3R 28831801 28831802 12 6924265 22.0 9.5 15.8 0.7 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_12_25365001 chr3R_25365001 RAL-392 2046 chr3R 21973659 21973703 chr3R 21973812 21973845 10 147 0.5 3.0 1.8 3.6 186 chr3R 21973659 intron Eip93F + chr3R 21973752 intron Eip93F + chr3R 21973845 intron Eip93F + chr3R_10_21970001 chr3R_21970001 RAL-392 2047 chr3R 21983122 21983164 chr3R 21983223 21983245 7 94 3.0 2.5 2.8 1.8 123 chr3R 21983122 intron Eip93F + chr3R 21983184 intron Eip93F + chr3R 21983245 intron Eip93F + chr3R_7_21980001 chr3R_21980001 RAL-392 2048 chr3R 21989095 21989101 chr3R 21989237 21989245 5 144 7.5 0.0 3.8 1.0 150 chr3R 21989095 intron Eip93F + chr3R 21989170 intron Eip93F + chr3R 21989245 intron Eip93F + chr3R_5_21985001 chr3R_21985001 RAL-392 2049 chr3R 22055565 22055568 chr3R 22055754 22055777 4 198 6.5 5.0 5.8 0.6 212 chr3R 22055565 intron how + chr3R 22055671 intron how + chr3R 22055777 intron how + chr3R_4_22055001 chr3R_22055001 RAL-392 2050 chr3R 22055571 22055586 chr3R 22055747 22055793 9 191 4.0 4.0 4.0 1.8 222 chr3R 22055571 intron how + chr3R 22055682 intron how + chr3R 22055793 intron how + chr3R_9_22055001 chr3R_22055001 RAL-392 2051 chr3R 22234701 22234711 chr3R 22236025 22236050 pogo 5 1336 2.0 11.0 6.5 0.7 1349 chr3R 22234701 intron SKIP + chr3R 22235376 intron SKIP + chr3R 22236050 intron SKIP + chr3R_5_22235001 chr3R_22235001 RAL-392 2052 chr3R 22234715 22234715 chr3R 22236007 22236054 pogo 4 1318 1.0 5.5 3.2 1.0 1339 chr3R 22234715 intron SKIP + chr3R 22235384 intron SKIP + chr3R 22236054 intron SKIP + chr3R_4_22235001 chr3R_22235001 RAL-392 2053 chr3R 22239493 22239524 chr3R 22248551 22248592 roo 5 9066 6.5 0.0 3.2 1.2 9099 chr3R 22239493 intron SKIP + chr3R 22244042 intron SKIP + chr3R 22248592 intron SKIP + chr3R_5_22240001 chr3R_22240001 RAL-392 2054 chr3R 22428580 22428608 chr3R 22428655 22428688 9 76 4.5 2.0 3.2 2.1 108 chr3R 22428580 intron CG13847 - chr3R 22428634 intron CG13847 - chr3R 22428688 intron CG13847 - chr3R_9_22425001 chr3R_22425001 RAL-392 2055 chr3R 22589772 22589821 chr3R 22590706 22590733 9 930 4.0 0.5 2.2 2.8 961 chr3R 22589772 intron Efa6 + chr3R 22590252 intron Efa6 + chr3R 22590733 intron Efa6 + chr3R_9_22590001 chr3R_22590001 RAL-392 2056 chr3R 22591658 22591693 chr3R 22591743 22591793 13 93 7.5 2.5 5.0 2.2 135 chr3R 22591658 intron Efa6 + chr3R 22591726 intron Efa6 + chr3R 22591793 intron Efa6 + chr3R_13_22590001 chr3R_22590001 RAL-392 2057 chr3R 22797762 22797936 chr3R 22797843 22798052 11 91 0.5 1.5 1.0 5.5 290 chr3R 22797762 intergenic not near genes chr3R 22797907 intergenic not near genes chr3R 22798052 intergenic not near genes chr3R_11_22795001 chr3R_22795001 RAL-392 2058 chr3R 22860132 22860171 chr3R 22860244 22860272 18 106 5.5 1.0 3.2 4.3 140 chr3R 22860132 intergenic not near genes chr3R 22860202 intergenic not near genes chr3R 22860272 intergenic not near genes chr3R_18_22860001 chr3R_22860001 RAL-392 2059 chr3R 22880921 22880960 chr3R 22881079 22881118 6 156 2.5 6.0 4.2 1.2 197 chr3R 22880921 intergenic not near genes chr3R 22881020 intergenic not near genes chr3R 22881118 intergenic not near genes chr3R_6_22880001 chr3R_22880001 RAL-392 2060 chr3R 22881187 22881228 chr3R 22884908 22884953 Doc 5 3719 6.5 4.5 5.5 0.8 3766 chr3R 22881187 intergenic not near genes chr3R 22883070 intergenic not near genes chr3R 22884953 intergenic not near genes chr3R_5_22880001 chr3R_22880001 RAL-392 2061 chr3R 22974294 22974302 chr3R 22974370 22974401 6 90 1.5 1.5 1.5 2.4 107 chr3R 22974294 intergenic not near genes chr3R 22974348 intergenic not near genes chr3R 22974401 intergenic not near genes chr3R_6_22970001 chr3R_22970001 RAL-392 2062 chr3R 23064154 23064203 chr3R 23064283 23064312 15 118 2.5 4.0 3.2 3.6 158 chr3R 23064154 exon CG17111 - chr3R 23064233 intron CG17111 - chr3R 23064312 exon CG17111 - chr3R_15_23060001 chr3R_23060001 RAL-392 2063 chr3R 23070638 23070699 chr3R 23070738 23070797 8 104 0.0 0.0 0.0 8.0 159 chr3R 23070638 3` UTR CG13830 - chr3R 23070718 3` UTR CG13830 - chr3R 23070797 3` UTR CG13830 - chr3R_8_23070001 chr3R_23070001 RAL-392 2064 chr3R 23073654 23073689 chr3R 23073743 23073792 11 87 4.0 2.5 3.2 2.6 138 chr3R 23073654 intron CG13830 - chr3R 23073723 intron CG13830 - chr3R 23073792 intron CG13830 - chr3R_11_23070001 chr3R_23070001 RAL-392 2065 chr3R 23225038 23225045 chr3R 23225134 23225141 7 96 5.0 0.0 2.5 2.0 103 chr3R 23225038 intron cnc - chr3R 23225090 intron cnc - chr3R 23225141 intron cnc - chr3R_7_23225001 chr3R_23225001 RAL-392 2066 chr3R 23307186 23307220 chr3R 23307280 23307314 5 88 1.5 4.5 3.0 1.2 128 chr3R 23307186 intron pnt - chr3R 23307250 intron pnt - chr3R 23307314 intron pnt - chr3R_5_23305001 chr3R_23305001 RAL-392 2067 chr3R 23346824 23346871 chr3R 23346922 23346968 10 95 2.0 2.5 2.2 3.1 144 chr3R 23346824 intergenic not near genes chr3R 23346896 intergenic not near genes chr3R 23346968 intergenic not near genes chr3R_10_23345001 chr3R_23345001 RAL-392 2068 chr3R 23393563 23393608 chr3R 23393670 23393696 10 100 2.0 6.5 4.2 1.9 133 chr3R 23393563 intergenic not near genes chr3R 23393630 intergenic not near genes chr3R 23393696 intergenic not near genes chr3R_10_23390001 chr3R_23390001 RAL-392 2069 chr3R 23558378 23558420 chr3R 23560179 23560192 Bari1 13 1792 3.0 1.5 2.2 4.1 1814 chr3R 23558378 intron beat-IV + chr3R 23559285 intron beat-IV + chr3R 23560192 intron beat-IV + chr3R_13_23555001 chr3R_23555001 RAL-392 2070 chr3R 23564427 23564468 chr3R 23564591 23564616 17 161 6.0 7.0 6.5 2.3 189 chr3R 23564427 intron beat-IV + chr3R 23564522 intron beat-IV + chr3R 23564616 intron beat-IV + chr3R_17_23560001 chr3R_23560001 RAL-392 2071 chr3R 23564470 23564476 chr3R 23564589 23564640 6 155 3.5 7.0 5.2 1.0 170 chr3R 23564470 intron beat-IV + chr3R 23564555 intron beat-IV + chr3R 23564640 intron beat-IV + chr3R_6_23560001 chr3R_23560001 RAL-392 2072 chr3R 23597848 23597861 chr3R 23597944 23597957 4 96 7.5 6.0 6.8 0.5 109 chr3R 23597848 exon CG10183 - chr3R 23597902 exon CG10183 - chr3R 23597957 exon CG10183 - chr3R_4_23595001 chr3R_23595001 RAL-392 2073 chr3R 23684706 23684725 chr3R 23685181 23685225 roo 8 485 3.0 6.5 4.8 1.4 519 chr3R 23684706 intron CG18754 + chr3R 23684966 intron CG18754 + chr3R 23685225 exon CG18754 + chr3R_8_23680001 chr3R_23680001 RAL-392 2074 chr3R 23725437 23725440 chr3R 23725538 23725541 4 101 11.0 8.5 9.8 0.4 104 chr3R 23725437 intron CG10365 + chr3R 23725489 intron CG10365 + chr3R 23725541 intron CG10365 + chr3R_4_23725001 chr3R_23725001 RAL-392 2075 chr3R 23725446 23725487 chr3R 23725536 23725562 15 98 3.5 8.0 5.8 2.2 116 chr3R 23725446 intron CG10365 + chr3R 23725504 intron CG10365 + chr3R 23725562 intron CG10365 + chr3R_15_23725001 chr3R_23725001 RAL-392 2076 chr3R 23801582 23801605 chr3R 23801664 23801684 4 92 3.0 0.0 1.5 1.6 102 chr3R 23801582 3` UTR mbc + chr3R 23801633 3` UTR mbc + chr3R 23801684 intergenic CG33111 -,mbc + chr3R_4_23800001 chr3R_23800001 RAL-392 2077 chr3R 23820641 23820666 chr3R 23820721 23820748 7 77 2.0 4.5 3.2 1.7 107 chr3R 23820641 5` UTR CG34355 + chr3R 23820694 5` UTR CG34355 + chr3R 23820748 5` UTR CG34355 + chr3R_7_23820001 chr3R_23820001 RAL-392 2078 chr3R 23835398 23835436 chr3R 23844563 23844589 roo 11 9163 5.5 5.5 5.5 1.7 9191 chr3R 23835398 intron CG34355 + chr3R 23839994 intron CG34355 + chr3R 23844589 intron CG34355 + chr3R_11_23835001 chr3R_23835001 RAL-392 2079 chr3R 23851067 23851085 chr3R 23858754 23858772 opus 6 7687 6.5 12.5 9.5 0.6 7705 chr3R 23851067 3` UTR CG34355 + chr3R 23854920 intergenic not near genes chr3R 23858772 intergenic not near genes chr3R_6_23850001 chr3R_23850001 RAL-392 2080 chr3R 23888069 23888115 chr3R 23888175 23888189 27 98 4.0 5.0 4.5 4.9 120 chr3R 23888069 intron Pli - chr3R 23888129 intron Pli - chr3R 23888189 intron Pli - chr3R_27_23885001 chr3R_23885001 RAL-392 2081 chr3R 23937597 23937636 chr3R 23937715 23937754 12 113 0.5 2.0 1.2 5.5 157 chr3R 23937597 exon Gdh - chr3R 23937676 intron Gdh - chr3R 23937754 exon Gdh - chr3R_12_23935001 chr3R_23935001 RAL-392 2082 chr3R 23944894 23944935 chr3R 23944999 23945010 7 93 6.5 5.0 5.8 1.0 116 chr3R 23944894 intron CG12268 - chr3R 23944952 intron CG12268 - chr3R 23945010 intron CG12268 - chr3R_7_23940001 chr3R_23940001 RAL-392 2083 chr3R 23949021 23949075 chr3R 23949118 23949144 23 90 2.5 6.5 4.5 4.2 123 chr3R 23949021 intergenic not near genes chr3R 23949082 intergenic not near genes chr3R 23949144 intergenic not near genes chr3R_23_23945001 chr3R_23945001 RAL-392 2084 chr3R 23962605 23962645 chr3R 23962730 23962778 4 128 3.5 0.0 1.8 1.4 173 chr3R 23962605 intergenic AP-1sigma + chr3R 23962692 intergenic AP-1sigma +,CG31140 + chr3R 23962778 intergenic AP-1sigma +,CG31140 + chr3R_4_23960001 chr3R_23960001 RAL-392 2085 chr3R 24011660 24011678 chr3R 24011753 24011781 5 101 0.0 9.5 4.8 0.9 121 chr3R 24011660 intron KrT95D - chr3R 24011720 intron KrT95D - chr3R 24011781 intron KrT95D - chr3R_5_24010001 chr3R_24010001 RAL-392 2086 chr3R 24076917 24076947 chr3R 24078379 24078418 hobo 11 1479 3.5 4.5 4.0 2.2 1501 chr3R 24076917 intron 4EHP - chr3R 24077668 intron 4EHP - chr3R 24078418 intron 4EHP - chr3R_11_24075001 chr3R_24075001 RAL-392 2087 chr3R 24207225 24207243 chr3R 24212298 24212334 flea 5 5087 2.5 7.0 4.8 0.9 5109 chr3R 24207225 intron twin - chr3R 24209780 intron twin - chr3R 24212334 intron twin - chr3R_5_24205001 chr3R_24205001 RAL-392 2088 chr3R 24424032 24424061 chr3R 24424261 24424308 7 229 3.5 3.5 3.5 1.6 276 chr3R 24424032 intron nAChRalpha1 - chr3R 24424170 intron nAChRalpha1 - chr3R 24424308 intron nAChRalpha1 - chr3R_7_24420001 chr3R_24420001 RAL-392 2089 chr3R 24426277 24426307 chr3R 24426554 24426584 6 272 6.0 8.0 7.0 0.8 307 chr3R 24426277 intron nAChRalpha1 - chr3R 24426430 intron nAChRalpha1 - chr3R 24426584 intron nAChRalpha1 - chr3R_6_24425001 chr3R_24425001 RAL-392 2090 chr3R 24433331 24433364 chr3R 24433491 24433506 8 154 2.0 2.0 2.0 2.7 175 chr3R 24433331 intron nAChRalpha1 - chr3R 24433418 intron nAChRalpha1 - chr3R 24433506 intron nAChRalpha1 - chr3R_8_24430001 chr3R_24430001 RAL-392 2091 chr3R 24434222 24434244 chr3R 24434319 24434325 6 92 7.0 2.0 4.5 1.1 103 chr3R 24434222 intron nAChRalpha1 - chr3R 24434274 intron nAChRalpha1 - chr3R 24434325 intron nAChRalpha1 - chr3R_6_24430001 chr3R_24430001 RAL-392 2092 chr3R 24493287 24493304 chr3R 24493524 24493554 BS 5 246 6.5 9.0 7.8 0.6 267 chr3R 24493287 intergenic not near genes chr3R 24493420 intergenic not near genes chr3R 24493554 intergenic not near genes chr3R_5_24490001 chr3R_24490001 RAL-392 2093 chr3R 24548540 24548593 chr3R 24548644 24548672 22 98 1.0 4.0 2.5 6.3 132 chr3R 24548540 intron Esyt2 + chr3R 24548606 intron Esyt2 + chr3R 24548672 intron Esyt2 + chr3R_22_24545001 chr3R_24545001 RAL-392 2094 chr3R 24594657 24594664 chr3R 24594917 24594924 pogo 4 260 4.0 2.5 3.2 1.0 267 chr3R 24594657 intron mld + chr3R 24594790 intron mld + chr3R 24594924 intron mld + chr3R_4_24590001 chr3R_24590001 RAL-392 2095 chr3R 24605546 24605553 chr3R 24605661 24605669 5 115 8.0 11.5 9.8 0.5 123 chr3R 24605546 intron mld + chr3R 24605608 intron mld + chr3R 24605669 intron mld + chr3R_5_24605001 chr3R_24605001 RAL-392 2096 chr3R 24667585 24667620 chr3R 24667682 24667717 10 97 6.5 0.0 3.2 2.4 132 chr3R 24667585 intron slo + chr3R 24667651 intron slo + chr3R 24667717 intron slo + chr3R_10_24665001 chr3R_24665001 RAL-392 2097 chr3R 24743012 24743053 chr3R 24743117 24743158 9 105 2.5 1.0 1.8 3.2 146 chr3R 24743012 intron tok + chr3R 24743085 intron tok + chr3R 24743158 intron tok + chr3R_9_24740001 chr3R_24740001 RAL-392 2098 chr3R 24842113 24842135 chr3R 24842190 24842225 8 93 5.0 1.5 3.2 1.9 112 chr3R 24842113 5` UTR Esp + chr3R 24842169 5` UTR Esp + chr3R 24842225 5` UTR Esp + chr3R_8_24840001 chr3R_24840001 RAL-392 2099 chr3R 24845985 24846023 chr3R 24846093 24846133 11 96 1.5 3.5 2.5 3.1 148 chr3R 24845985 intron Esp + chr3R 24846059 intron Esp + chr3R 24846133 intron Esp + chr3R_11_24845001 chr3R_24845001 RAL-392 2100 chr3R 24893448 24893491 chr3R 24893547 24893586 11 99 3.0 4.5 3.8 2.3 138 chr3R 24893448 intron CG31121 - chr3R 24893517 intron CG31121 - chr3R 24893586 intron CG31121 - chr3R_11_24890001 chr3R_24890001 RAL-392 2101 chr3R 24927131 24927136 chr3R 24931916 24931947 Doc 5 4802 10.0 4.0 7.0 0.6 4816 chr3R 24927131 intergenic Trf4-2 + chr3R 24929539 intergenic not near genes chr3R 24931947 intergenic CG11771 + chr3R_5_24925001 chr3R_24925001 RAL-392 2102 chr3R 24927138 24927162 chr3R 24931915 24931939 Doc 15 4795 5.0 4.0 4.5 2.7 4801 chr3R 24927138 intergenic Trf4-2 + chr3R 24929538 intergenic not near genes chr3R 24931939 intergenic CG11771 + chr3R_15_24925001 chr3R_24925001 RAL-392 2103 chr3R 25004898 25004914 chr3R 25005001 25005004 5 100 0.5 4.0 2.2 1.6 106 chr3R 25004898 intron tnc + chr3R 25004951 intron tnc + chr3R 25005004 intron tnc + chr3R_5_25000001 chr3R_25000001 RAL-392 2104 chr3R 25136378 25136430 chr3R 25136478 25136495 24 93 6.0 6.0 6.0 3.4 117 chr3R 25136378 3` UTR Bili + chr3R 25136436 3` UTR Bili + chr3R 25136495 3` UTR Bili + chr3R_24_25135001 chr3R_25135001 RAL-392 2105 chr3R 25166236 25166395 chr3R 25166336 25166491 15 95 0.5 0.0 0.2 12.5 255 chr3R 25166236 intergenic not near genes chr3R 25166364 intergenic not near genes chr3R 25166491 intergenic not near genes chr3R_15_25165001 chr3R_25165001 RAL-392 2106 chr3R 25200548 25200571 chr3R 25200627 25200654 13 92 6.5 7.5 7.0 1.6 106 chr3R 25200548 intron,intron Cad96Ca -,CG13654 + chr3R 25200601 intron,intron Cad96Ca -,CG13654 + chr3R 25200654 intron,intron Cad96Ca -,CG13654 + chr3R_13_25200001 chr3R_25200001 RAL-392 2107 chr3R 25241801 25241830 chr3R 25241883 25241922 9 86 2.0 6.5 4.2 1.7 121 chr3R 25241801 intergenic to +,CG11854 + chr3R 25241862 intergenic CG11854 +,to + chr3R 25241922 intergenic CG11854 +,to + chr3R_9_25240001 chr3R_25240001 RAL-392 2108 chr3R 25270769 25270776 chr3R 25270834 25270872 4 77 0.5 6.5 3.5 0.9 103 chr3R 25270769 exon,5` UTR CG11889 +,CG11891 + chr3R 25270820 exon,5` UTR CG11889 +,CG11891 + chr3R 25270872 exon,5` UTR CG11889 +,CG11891 + chr3R_4_25270001 chr3R_25270001 RAL-392 2109 chr3R 25302663 25302708 chr3R 25302932 25302953 14 263 3.5 5.0 4.2 2.7 290 chr3R 25302663 exon CG31370 + chr3R 25302808 exon CG31370 + chr3R 25302953 exon CG31370 + chr3R_14_25300001 chr3R_25300001 RAL-392 2110 chr3R 25368474 25368497 chr3R 25368596 25368599 9 130 5.5 0.0 2.8 2.4 125 chr3R 25368474 intron Fur1 - chr3R 25368536 intron Fur1 - chr3R 25368599 intron Fur1 - chr3R_9_25365001 chr3R_25365001 RAL-392 2111 chr3R 25411767 25411802 chr3R 25411883 25411925 7 120 0.5 3.0 1.8 2.5 158 chr3R 25411767 intron Fur1 - chr3R 25411846 intron Fur1 - chr3R 25411925 intron Fur1 - chr3R_7_25410001 chr3R_25410001 RAL-392 2112 chr3R 25436475 25436521 chr3R 25436589 25436600 13 100 5.0 4.0 4.5 2.4 125 chr3R 25436475 intron Fur1 - chr3R 25436538 intron Fur1 - chr3R 25436600 intron Fur1 - chr3R_13_25435001 chr3R_25435001 RAL-392 2113 chr3R 7773344 7773344 chr3R 25538124 25538124 5 17764780 21.5 10.0 15.8 0.3 17764780 chr3R 7773344 intergenic not near genes chr3R 16655734 intergenic modSP - chr3R 25538124 intron msi + chr3R_5_16655001 chr3R_16655001 RAL-392 2114 chr3R 25544832 25544882 chr3R 25544949 25544983 22 113 10.0 6.5 8.2 2.4 151 chr3R 25544832 intron msi + chr3R 25544908 intron msi + chr3R 25544983 intron msi + chr3R_22_25540001 chr3R_25540001 RAL-392 2115 chr3R 25604771 25604791 chr3R 25604883 25604903 10 112 8.0 3.5 5.8 1.5 132 chr3R 25604771 3` UTR,intron msi +,ymp - chr3R 25604837 3` UTR,intron msi +,ymp - chr3R 25604903 3` UTR,intron msi +,ymp - chr3R_10_25600001 chr3R_25600001 RAL-392 2116 chr3R 25604793 25604809 chr3R 25604880 25604921 7 108 6.0 2.5 4.2 1.3 128 chr3R 25604793 3` UTR,intron msi +,ymp - chr3R 25604857 3` UTR,intron msi +,ymp - chr3R 25604921 3` UTR,intron msi +,ymp - chr3R_7_25600001 chr3R_25600001 RAL-392 2117 chr3R 25621024 25621072 chr3R 25621119 25621143 9 89 6.0 3.5 4.8 1.6 119 chr3R 25621024 intron Npl4 - chr3R 25621084 intron Npl4 - chr3R 25621143 intron Npl4 - chr3R_9_25620001 chr3R_25620001 RAL-392 2118 chr3R 25669049 25669093 chr3R 25669163 25669187 9 100 2.5 2.5 2.5 2.6 138 chr3R 25669049 intron Lgr3 + chr3R 25669118 intron Lgr3 + chr3R 25669187 intron Lgr3 + chr3R_9_25665001 chr3R_25665001 RAL-392 2119 chr3R 25689122 25689159 chr3R 25689239 25689271 9 121 6.0 2.0 4.0 1.8 149 chr3R 25689122 intergenic not near genes chr3R 25689196 intergenic not near genes chr3R 25689271 intergenic not near genes chr3R_9_25685001 chr3R_25685001 RAL-392 2120 chr3R 25725823 25725860 chr3R 25734997 25735040 roo 12 9173 4.5 8.0 6.2 1.7 9217 chr3R 25725823 intron LpR2 - chr3R 25730432 intron LpR2 - chr3R 25735040 intron LpR2 - chr3R_12_25730001 chr3R_25730001 RAL-392 2121 chr3R 25737658 25737697 chr3R 25737868 25737900 9 214 6.0 1.0 3.5 2.0 242 chr3R 25737658 intron LpR2 - chr3R 25737779 intron LpR2 - chr3R 25737900 intron LpR2 - chr3R_9_25735001 chr3R_25735001 RAL-392 2122 chr3R 25832699 25832719 chr3R 25841888 25841908 roo 4 9196 4.5 7.0 5.8 0.6 9209 chr3R 25832699 exon alpha4GT2 + chr3R 25837304 intron alpha4GT2 + chr3R 25841908 exon alpha4GT2 + chr3R_4_25835001 chr3R_25835001 RAL-392 2123 chr3R 25843619 25843668 chr3R 25843769 25843817 15 148 1.5 6.5 4.0 3.0 198 chr3R 25843619 intergenic CR45653 + chr3R 25843718 intergenic CR45653 + chr3R 25843817 intergenic CR45653 + chr3R_15_25840001 chr3R_25840001 RAL-392 2124 chr3R 25846132 25846143 chr3R 25846236 25846249 4 106 4.5 2.5 3.5 0.9 117 chr3R 25846132 5` UTR CR45654 + chr3R 25846190 5` UTR CR45654 + chr3R 25846249 5` UTR CR45654 + chr3R_4_25845001 chr3R_25845001 RAL-392 2125 chr3R 25861808 25861849 chr3R 25861901 25861946 19 96 3.5 3.5 3.5 4.2 138 chr3R 25861808 intron CG5890 + chr3R 25861877 intron CG5890 + chr3R 25861946 intron CG5890 + chr3R_19_25860001 chr3R_25860001 RAL-392 2126 chr3R 25939201 25939221 chr3R 25939299 25939305 12 105 2.0 4.0 3.0 3.0 104 chr3R 25939201 intron CCAP-R - chr3R 25939253 intron CCAP-R - chr3R 25939305 intron CCAP-R - chr3R_12_25935001 chr3R_25935001 RAL-392 2127 chr3R 25997232 25997244 chr3R 25997339 25997343 7 105 8.5 2.5 5.5 1.1 111 chr3R 25997232 intergenic CG43116 -,E(spl)mdelta-HLH + chr3R 25997288 intergenic CG43116 -,E(spl)mdelta-HLH + chr3R 25997343 intergenic E(spl)mdelta-HLH +,CG43116 - chr3R_7_25995001 chr3R_25995001 RAL-392 2128 chr3R 26013832 26013862 chr3R 26013932 26013962 5 96 4.0 3.0 3.5 1.1 130 chr3R 26013832 intergenic not near genes chr3R 26013897 intergenic not near genes chr3R 26013962 intergenic not near genes chr3R_5_26010001 chr3R_26010001 RAL-392 2129 chr3R 26122445 26122457 chr3R 26122541 26122553 4 96 7.5 5.0 6.2 0.6 108 chr3R 26122445 intron CG31324 + chr3R 26122499 intron CG31324 + chr3R 26122553 intron CG31324 + chr3R_4_26120001 chr3R_26120001 RAL-392 2130 chr3R 26166155 26166206 chr3R 26166261 26166302 9 96 4.0 6.5 5.2 1.5 147 chr3R 26166155 intergenic not near genes chr3R 26166228 intergenic not near genes chr3R 26166302 intergenic not near genes chr3R_9_26165001 chr3R_26165001 RAL-392 2131 chr3R 26239810 26239836 chr3R 26240141 26240167 10 325 11.0 4.5 7.8 1.1 357 chr3R 26239810 intron CR42745 + chr3R 26239988 intron CR42745 + chr3R 26240167 intron CR42745 + chr3R_10_26235001 chr3R_26235001 RAL-392 2132 chr3R 26239839 26239849 chr3R 26240138 26240180 4 318 8.0 4.5 6.2 0.6 341 chr3R 26239839 intron CR42745 + chr3R 26240010 intron CR42745 + chr3R 26240180 intron CR42745 + chr3R_4_26240001 chr3R_26240001 RAL-392 2133 chr3R 26314841 26314859 chr3R 26315228 26315245 5 387 5.0 2.0 3.5 1.1 404 chr3R 26314841 intergenic not near genes chr3R 26315043 intergenic not near genes chr3R 26315245 intergenic not near genes chr3R_5_26315001 chr3R_26315001 RAL-392 2134 chr3R 26332863 26332909 chr3R 26332972 26333003 14 102 5.0 1.5 3.2 3.3 140 chr3R 26332863 intron CG33970 + chr3R 26332933 intron CG33970 + chr3R 26333003 intron CG33970 + chr3R_14_26330001 chr3R_26330001 RAL-392 2135 chr3R 26365090 26365145 chr3R 26365195 26365249 18 103 3.5 6.5 5.0 3.0 159 chr3R 26365090 intergenic not near genes chr3R 26365170 intergenic not near genes chr3R 26365249 intergenic not near genes chr3R_18_26365001 chr3R_26365001 RAL-392 2136 chr3R 26376316 26376358 chr3R 26385485 26385518 roo 15 9159 6.5 1.5 4.0 3.0 9202 chr3R 26376316 intergenic not near genes chr3R 26380917 intergenic not near genes chr3R 26385518 intergenic not near genes chr3R_15_26380001 chr3R_26380001 RAL-392 2137 chr3R 26387317 26387349 chr3R 26387392 26387414 7 76 2.5 3.5 3.0 1.8 97 chr3R 26387317 intergenic not near genes chr3R 26387366 intergenic not near genes chr3R 26387414 intergenic not near genes chr3R_7_26385001 chr3R_26385001 RAL-392 2138 chr3R 26409905 26409946 chr3R 26410011 26410052 9 105 4.5 3.5 4.0 1.8 147 chr3R 26409905 intergenic not near genes chr3R 26409978 intergenic not near genes chr3R 26410052 intergenic not near genes chr3R_9_26405001 chr3R_26405001 RAL-392 2139 chr3R 26463766 26463811 chr3R 26463954 26463967 14 176 3.0 9.5 6.2 1.9 201 chr3R 26463766 intron CG5455 + chr3R 26463866 intron CG5455 + chr3R 26463967 intron CG5455 + chr3R_14_26460001 chr3R_26460001 RAL-392 2140 chr3R 26540980 26541031 chr3R 26541080 26541130 15 94 1.5 5.5 3.5 3.3 150 chr3R 26540980 intron scrib + chr3R 26541055 intron scrib + chr3R 26541130 intron scrib + chr3R_15_26540001 chr3R_26540001 RAL-392 2141 chr3R 26642720 26642760 chr3R 26643123 26643142 jockey 9 407 6.0 6.0 6.0 1.3 422 chr3R 26642720 intergenic not near genes chr3R 26642931 intergenic not near genes chr3R 26643142 intergenic not near genes chr3R_9_26640001 chr3R_26640001 RAL-392 2142 chr3R 26660653 26660678 chr3R 26660731 26660751 5 84 1.5 3.0 2.2 1.6 98 chr3R 26660653 intron beat-VII - chr3R 26660702 intron beat-VII - chr3R 26660751 intron beat-VII - chr3R_5_26660001 chr3R_26660001 RAL-392 2143 chr3R 26770333 26770356 chr3R 26770697 26770730 8 371 6.5 2.5 4.5 1.5 397 chr3R 26770333 intergenic not near genes chr3R 26770532 intergenic not near genes chr3R 26770730 intergenic not near genes chr3R_8_26770001 chr3R_26770001 RAL-392 2144 chr3R 26806156 26806168 chr3R 26806244 26806284 7 115 1.0 6.5 3.8 1.5 128 chr3R 26806156 intron Tl + chr3R 26806220 intron Tl + chr3R 26806284 intron Tl + chr3R_7_26805001 chr3R_26805001 RAL-392 2145 chr3R 26810539 26810558 chr3R 26811038 26811056 roo 9 499 4.5 2.0 3.2 2.1 517 chr3R 26810539 intron Tl + chr3R 26810798 intron Tl + chr3R 26811056 intron Tl + chr3R_9_26810001 chr3R_26810001 RAL-392 2146 chr3R 26845574 26845592 chr3R 26845654 26845692 6 88 3.5 2.0 2.8 1.6 118 chr3R 26845574 intron Lerp - chr3R 26845633 intron Lerp - chr3R 26845692 intron Lerp - chr3R_6_26845001 chr3R_26845001 RAL-392 2147 chr3R 26901493 26901532 chr3R 26901598 26901637 4 105 4.0 0.5 2.2 1.2 144 chr3R 26901493 intron T48 + chr3R 26901565 intron T48 + chr3R 26901637 intron T48 + chr3R_4_26900001 chr3R_26900001 RAL-392 2148 chr3R 27007390 27007436 chr3R 27016540 27016556 roo 13 9150 5.0 4.0 4.5 2.4 9166 chr3R 27007390 intron RYa-R + chr3R 27011973 intron RYa-R + chr3R 27016556 intron RYa-R + chr3R_13_27010001 chr3R_27010001 RAL-392 2149 chr3R 27028702 27028756 chr3R 27028801 27028855 6 99 3.5 2.5 3.0 1.5 153 chr3R 27028702 intron RYa-R + chr3R 27028778 intron RYa-R + chr3R 27028855 intron RYa-R + chr3R_6_27025001 chr3R_27025001 RAL-392 2150 chr3R 27030202 27030236 chr3R 27030351 27030378 8 144 9.0 0.0 4.5 1.5 176 chr3R 27030202 intron RYa-R + chr3R 27030290 intron RYa-R + chr3R 27030378 intron RYa-R + chr3R_8_27030001 chr3R_27030001 RAL-392 2151 chr3R 27088375 27088410 chr3R 27088489 27088524 6 106 3.5 7.0 5.2 1.0 149 chr3R 27088375 intergenic not near genes chr3R 27088450 intergenic not near genes chr3R 27088524 intergenic not near genes chr3R_6_27085001 chr3R_27085001 RAL-392 2152 chr3R 27140521 27140544 chr3R 27148130 27148174 412 6 7618 6.0 5.5 5.8 0.9 7653 chr3R 27140521 intron CG6051 - chr3R 27144348 intron CG6051 - chr3R 27148174 intron CG6051 - chr3R_6_27140001 chr3R_27140001 RAL-392 2153 chr3R 27215149 27215185 chr3R 27215235 27215252 7 86 6.5 3.5 5.0 1.2 103 chr3R 27215149 intergenic not near genes chr3R 27215200 intergenic not near genes chr3R 27215252 intergenic not near genes chr3R_7_27215001 chr3R_27215001 RAL-392 2154 chr3R 27234303 27234323 chr3R 27240622 27240643 4 6316 24.0 19.0 21.5 0.2 6340 chr3R 27234303 intron,exon CG31064 -,CG31068 + chr3R 27237473 intron CG31064 - chr3R 27240643 exon DNApol-alpha73 + chr3R_4_27235001 chr3R_27235001 RAL-392 2155 chr3R 27329462 27329482 chr3R 27329559 27329579 6 97 7.0 4.5 5.8 0.9 117 chr3R 27329462 intergenic CG3330 - chr3R 27329520 intergenic CG3330 - chr3R 27329579 intergenic CG3330 - chr3R_6_27325001 chr3R_27325001 RAL-392 2156 chr3R 27329484 27329502 chr3R 27329555 27329599 7 86 5.0 3.5 4.2 1.3 115 chr3R 27329484 intergenic CG3330 - chr3R 27329542 intergenic CG3330 - chr3R 27329599 intergenic CG3330 - chr3R_7_27325001 chr3R_27325001 RAL-392 2157 chr3R 27342788 27342826 chr3R 27351377 27351418 Tirant 8 8598 5.5 5.5 5.5 1.2 8630 chr3R 27342788 intron CG42534 + chr3R 27347103 intron CG42534 + chr3R 27351418 intron CG42534 + chr3R_8_27345001 chr3R_27345001 RAL-392 2158 chr3R 27420148 27420177 chr3R 27420255 27420284 11 106 5.0 2.0 3.5 2.4 136 chr3R 27420148 intron side - chr3R 27420216 intron side - chr3R 27420284 intron side - chr3R_11_27420001 chr3R_27420001 RAL-392 2159 chr3R 27456114 27456163 chr3R 27456220 27456270 6 100 1.5 0.0 0.8 3.3 156 chr3R 27456114 intergenic not near genes chr3R 27456192 intergenic not near genes chr3R 27456270 intergenic not near genes chr3R_6_27455001 chr3R_27455001 RAL-392 2160 chr3R 27473778 27473796 chr3R 27474017 27474064 4 252 6.5 2.0 4.2 0.8 286 chr3R 27473778 intergenic not near genes chr3R 27473921 intergenic not near genes chr3R 27474064 intergenic not near genes chr3R_4_27470001 chr3R_27470001 RAL-392 2161 chr3R 27479163 27479181 chr3R 27479277 27479312 6 120 6.5 5.0 5.8 0.9 149 chr3R 27479163 exon Cyp6a18 + chr3R 27479238 exon Cyp6a18 + chr3R 27479312 exon Cyp6a18 + chr3R_6_27475001 chr3R_27475001 RAL-392 2162 chr3R 27496577 27496603 chr3R 27496697 27496728 5 124 4.0 2.0 3.0 1.2 151 chr3R 27496577 intergenic not near genes chr3R 27496652 intergenic not near genes chr3R 27496728 intergenic not near genes chr3R_5_27495001 chr3R_27495001 RAL-392 2163 chr3R 27519151 27519185 chr3R 27519265 27519304 5 112 12.0 4.5 8.2 0.5 153 chr3R 27519151 intergenic not near genes chr3R 27519228 intergenic not near genes chr3R 27519304 intergenic not near genes chr3R_5_27515001 chr3R_27515001 RAL-392 2164 chr3R 27521149 27521185 chr3R 27530368 27530409 roo 23 9227 4.0 3.5 3.8 4.8 9260 chr3R 27521149 intron CG12885 + chr3R 27525779 intron CG12885 + chr3R 27530409 intron CG12885 + chr3R_23_27525001 chr3R_27525001 RAL-392 2165 chr3R 27570264 27570296 chr3R 27570358 27570379 5 87 0.5 2.0 1.2 2.3 115 chr3R 27570264 intron wdb - chr3R 27570322 intron wdb - chr3R 27570379 intron wdb - chr3R_5_27570001 chr3R_27570001 RAL-392 2166 chr3R 27594723 27594769 chr3R 27594828 27594863 6 99 2.5 3.5 3.0 1.5 140 chr3R 27594723 intron CG5639 - chr3R 27594793 intron CG5639 - chr3R 27594863 intron CG5639 - chr3R_6_27590001 chr3R_27590001 RAL-392 2167 chr3R 27627065 27627119 chr3R 27627187 27627225 9 115 0.5 3.0 1.8 3.2 160 chr3R 27627065 intron Tusp + chr3R 27627145 intron Tusp + chr3R 27627225 intron Tusp + chr3R_9_27625001 chr3R_27625001 RAL-392 2168 chr3R 27752738 27752788 chr3R 27753143 27753156 6 389 3.0 4.5 3.8 1.2 418 chr3R 27752738 intergenic not near genes chr3R 27752947 intergenic not near genes chr3R 27753156 intergenic not near genes chr3R_6_27750001 chr3R_27750001 RAL-392 2169 chr3R 27799925 27799964 chr3R 27800021 27800061 10 101 3.0 5.5 4.2 1.9 136 chr3R 27799925 intron CG34353 - chr3R 27799993 intron CG34353 - chr3R 27800061 intron CG34353 - chr3R_10_27795001 chr3R_27795001 RAL-392 2170 chr3R 27829884 27829917 chr3R 27829983 27829991 8 94 7.0 0.0 3.5 1.8 107 chr3R 27829884 intron CG34353 - chr3R 27829938 intron CG34353 - chr3R 27829991 intron CG34353 - chr3R_8_27825001 chr3R_27825001 RAL-392 2171 chr3R 27841087 27841104 chr3R 27841188 27841194 5 95 3.5 2.5 3.0 1.2 107 chr3R 27841087 intron CG34353 - chr3R 27841140 intron CG34353 - chr3R 27841194 intron CG34353 - chr3R_5_27840001 chr3R_27840001 RAL-392 2172 chr3R 27841108 27841137 chr3R 27841186 27841203 4 72 2.0 2.0 2.0 1.3 95 chr3R 27841108 intron CG34353 - chr3R 27841156 intron CG34353 - chr3R 27841203 intron CG34353 - chr3R_4_27840001 chr3R_27840001 RAL-392 2173 chr3R 27856739 27856786 chr3R 27858242 27858289 hopper2 6 1502 7.0 2.0 4.5 1.1 1550 chr3R 27856739 intron CG34353 - chr3R 27857514 intron CG34353 - chr3R 27858289 intron CG34353 - chr3R_6_27855001 chr3R_27855001 RAL-392 2174 chr3R 27862955 27862984 chr3R 27868262 27868263 Transpac 9 5309 3.0 4.0 3.5 2.0 5308 chr3R 27862955 intron CG34353 - chr3R 27865609 intron CG34353 - chr3R 27868263 intron CG34353 - chr3R_9_27865001 chr3R_27865001 RAL-392 2175 chr3R 27875688 27875729 chr3R 27882756 27882799 297 24 7072 7.0 7.0 7.0 3.0 7111 chr3R 27875688 intron CG34353 - chr3R 27879244 intron CG34353 - chr3R 27882799 intron CG34353 - chr3R_24_27875001 chr3R_27875001 RAL-392 2176 chr3R 28068489 28068520 chr3R 28073936 28073962 I-element 4 5450 2.5 2.5 2.5 1.1 5473 chr3R 28068489 intron CG34362 + chr3R 28071226 intron CG34362 + chr3R 28073962 intron CG34362 + chr3R_4_28070001 chr3R_28070001 RAL-392 2177 chr3R 28102258 28102268 chr3R 28102332 28102334 5 82 2.0 3.5 2.8 1.3 76 chr3R 28102258 intergenic not near genes chr3R 28102296 intergenic not near genes chr3R 28102334 intergenic not near genes chr3R_5_28100001 chr3R_28100001 RAL-392 2178 chr3R 28102717 28102742 chr3R 28102809 28102824 4 95 1.5 1.5 1.5 1.6 107 chr3R 28102717 intergenic not near genes chr3R 28102770 intergenic not near genes chr3R 28102824 intergenic not near genes chr3R_4_28100001 chr3R_28100001 RAL-392 2179 chr3R 28152342 28152358 chr3R 28152423 28152445 4 89 5.0 3.5 4.2 0.8 103 chr3R 28152342 intron CG34354 + chr3R 28152394 intron CG34354 + chr3R 28152445 intron CG34354 + chr3R_4_28150001 chr3R_28150001 RAL-392 2180 chr3R 28172955 28172996 chr3R 28173132 28173174 8 173 0.0 4.5 2.2 2.5 219 chr3R 28172955 intron CG34354 + chr3R 28173064 intron CG34354 + chr3R 28173174 intron CG34354 + chr3R_8_28170001 chr3R_28170001 RAL-392 2181 chr3R 28173654 28173703 chr3R 28181104 28181153 mdg1 11 7448 3.0 4.5 3.8 2.3 7499 chr3R 28173654 intron CG34354 + chr3R 28177404 intron CG34354 + chr3R 28181153 intron CG34354 + chr3R_11_28175001 chr3R_28175001 RAL-392 2182 chr3R 28301767 28301781 chr3R 28301869 28301877 5 101 9.5 5.5 7.5 0.6 110 chr3R 28301767 intergenic not near genes chr3R 28301822 intergenic not near genes chr3R 28301877 intergenic not near genes chr3R_5_28300001 chr3R_28300001 RAL-392 2183 chr3R 28301788 28301820 chr3R 28301868 28301920 13 94 3.0 5.5 4.2 2.5 132 chr3R 28301788 intergenic not near genes chr3R 28301854 intergenic not near genes chr3R 28301920 intergenic not near genes chr3R_13_28300001 chr3R_28300001 RAL-392 2184 chr3R 28302088 28302117 chr3R 28302550 28302563 jockey 14 460 5.0 10.5 7.8 1.6 475 chr3R 28302088 intergenic not near genes chr3R 28302326 intergenic not near genes chr3R 28302563 intergenic not near genes chr3R_14_28300001 chr3R_28300001 RAL-392 2185 chr3R 28345636 28345664 chr3R 28345732 28345743 4 87 6.0 3.5 4.8 0.7 107 chr3R 28345636 intergenic Moca-cyp + chr3R 28345690 intergenic not near genes chr3R 28345743 intergenic not near genes chr3R_4_28345001 chr3R_28345001 RAL-392 2186 chr3R 28352906 28352957 chr3R 28353005 28353056 17 88 3.5 4.5 4.0 3.4 150 chr3R 28352906 exon Or98b + chr3R 28352981 exon Or98b + chr3R 28353056 exon Or98b + chr3R_17_28350001 chr3R_28350001 RAL-392 2187 chr3R 28390123 28390137 chr3R 28390193 28390219 8 74 2.5 4.5 3.5 1.8 96 chr3R 28390123 intergenic not near genes chr3R 28390171 intergenic not near genes chr3R 28390219 intergenic not near genes chr3R_8_28390001 chr3R_28390001 RAL-392 2188 chr3R 28390138 28390142 chr3R 28390191 28390196 5 71 2.0 4.0 3.0 1.2 58 chr3R 28390138 intergenic not near genes chr3R 28390167 intergenic not near genes chr3R 28390196 intergenic not near genes chr3R_5_28390001 chr3R_28390001 RAL-392 2189 chr3R 28393679 28393730 chr3R 28393799 28393850 20 118 1.0 4.5 2.8 5.3 171 chr3R 28393679 intergenic not near genes chr3R 28393764 intergenic not near genes chr3R 28393850 intergenic not near genes chr3R_20_28390001 chr3R_28390001 RAL-392 2190 chr3R 28407704 28407741 chr3R 28407791 28407806 7 97 1.0 6.0 3.5 1.6 102 chr3R 28407704 intergenic not near genes chr3R 28407755 intergenic not near genes chr3R 28407806 intergenic not near genes chr3R_7_28405001 chr3R_28405001 RAL-392 2191 chr3R 28478430 28478438 chr3R 28478506 28478523 4 84 3.5 4.0 3.8 0.8 93 chr3R 28478430 intergenic not near genes chr3R 28478476 intergenic not near genes chr3R 28478523 intergenic not near genes chr3R_4_28475001 chr3R_28475001 RAL-392 2192 chr3R 28479146 28479163 chr3R 28479234 28479266 12 95 3.0 4.5 3.8 2.5 120 chr3R 28479146 intergenic not near genes chr3R 28479206 intergenic not near genes chr3R 28479266 intergenic not near genes chr3R_12_28475001 chr3R_28475001 RAL-392 2193 chr3R 28480304 28480330 chr3R 28480405 28480431 8 99 0.5 7.0 3.8 1.7 127 chr3R 28480304 intergenic not near genes chr3R 28480368 intergenic not near genes chr3R 28480431 intergenic not near genes chr3R_8_28480001 chr3R_28480001 RAL-392 2194 chr3R 28484353 28484395 chr3R 28486250 28486292 48 1902 91.5 131.0 111.2 0.4 1939 chr3R 28484353 intergenic CG1894 + chr3R 28485322 exon CG1894 + chr3R 28486292 intergenic CG1894 + chr3R_48_28485001 chr3R_28485001 RAL-392 2195 chr3R 28527686 28527703 chr3R 28527744 28527746 4 53 25.0 21.0 23.0 0.2 60 chr3R 28527686 exon Ppn - chr3R 28527716 exon Ppn - chr3R 28527746 exon Ppn - chr3R_4_28525001 chr3R_28525001 RAL-392 2196 chr3R 28616465 28616501 chr3R 28616571 28616615 18 104 4.0 5.5 4.8 3.1 150 chr3R 28616465 intron CG10011 - chr3R 28616540 intron CG10011 - chr3R 28616615 intron CG10011 - chr3R_18_28615001 chr3R_28615001 RAL-392 2197 chr3R 28702951 28702964 chr3R 28703017 28703067 6 89 2.5 8.5 5.5 0.9 116 chr3R 28702951 intron htt + chr3R 28703009 intron htt + chr3R 28703067 intron htt + chr3R_6_28700001 chr3R_28700001 RAL-392 2198 chr3R 28742473 28742514 chr3R 28742561 28742606 15 93 1.5 7.0 4.2 2.9 133 chr3R 28742473 intron AstA-R2 - chr3R 28742540 intron AstA-R2 - chr3R 28742606 intron AstA-R2 - chr3R_15_28740001 chr3R_28740001 RAL-392 2199 chr3R 28758303 28758316 chr3R 28771330 28771333 Stalker4 5 13025 4.0 6.0 5.0 0.8 13030 chr3R 28758303 intergenic aqrs - chr3R 28764818 intergenic not near genes chr3R 28771333 intergenic not near genes chr3R_5_28760001 chr3R_28760001 RAL-392 2200 chr3R 28775015 28775045 chr3R 28775159 28775163 4 139 2.5 3.5 3.0 1.0 148 chr3R 28775015 intergenic not near genes chr3R 28775089 intergenic not near genes chr3R 28775163 intergenic not near genes chr3R_4_28775001 chr3R_28775001 RAL-392 2201 chr3R 28792867 28792902 chr3R 28797970 28798014 jockey 8 5105 1.0 1.5 1.2 3.6 5147 chr3R 28792867 intergenic not near genes chr3R 28795440 intergenic not near genes chr3R 28798014 intergenic not near genes chr3R_8_28795001 chr3R_28795001 RAL-392 2202 chr3R 28811571 28811603 chr3R 28811737 28811762 8 165 3.5 8.5 6.0 1.1 191 chr3R 28811571 intergenic wdn - chr3R 28811666 intergenic wdn -,CG1646 + chr3R 28811762 intergenic CG1646 +,wdn - chr3R_8_28810001 chr3R_28810001 RAL-392 2203 chr3R 28819631 28819659 chr3R 28819722 28819753 4 95 17.5 27.5 22.5 0.2 122 chr3R 28819631 5` UTR CG1523 - chr3R 28819692 intergenic CG1523 - chr3R 28819753 intergenic CG1523 -,CG1647 + chr3R_4_28815001 chr3R_28815001 RAL-392 2204 chr3R 21907535 21907535 chr3R 28831801 28831802 5 6924266 21.5 9.5 15.5 0.3 6924267 chr3R 21907535 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_5_25365001 chr3R_25365001 RAL-392 2205 chr3R 28971150 28971192 chr3R 28971251 28971293 8 101 3.5 2.5 3.0 2.0 143 chr3R 28971150 5` UTR CR45669 + chr3R 28971222 5` UTR CR45669 + chr3R 28971293 5` UTR CR45669 + chr3R_8_28970001 chr3R_28970001 RAL-392 2206 chr3R 28989899 28989932 chr3R 28990089 28990092 5 187 1.5 1.0 1.2 2.3 193 chr3R 28989899 intergenic not near genes chr3R 28989996 intergenic not near genes chr3R 28990092 intergenic not near genes chr3R_5_28990001 chr3R_28990001 RAL-392 2207 chr3R 29023908 29023916 chr3R 29023993 29024009 4 91 3.0 7.5 5.2 0.6 101 chr3R 29023908 5` UTR CR45567 + chr3R 29023958 5` UTR CR45567 + chr3R 29024009 5` UTR CR45567 + chr3R_4_29020001 chr3R_29020001 RAL-392 2208 chr3R 29070042 29070080 chr3R 29070138 29070181 21 97 6.5 7.0 6.8 2.7 139 chr3R 29070042 intron CG11873 + chr3R 29070112 intron CG11873 + chr3R 29070181 intron CG11873 + chr3R_21_29070001 chr3R_29070001 RAL-392 2209 chr3R 29213039 29213090 chr3R 29213142 29213193 32 99 8.5 6.0 7.2 3.9 154 chr3R 29213039 intergenic not near genes chr3R 29213116 intergenic not near genes chr3R 29213193 intergenic not near genes chr3R_32_29210001 chr3R_29210001 RAL-392 2210 chr3R 29237252 29237282 chr3R 29239275 29239322 6 2026 21.5 9.0 15.2 0.4 2070 chr3R 29237252 exon CG11951 - chr3R 29238287 intron CG11951 - chr3R 29239322 exon CG31427 - chr3R_6_29235001 chr3R_29235001 RAL-392 2211 chr3R 29249635 29249652 chr3R 29249710 29249748 10 92 3.5 2.0 2.8 2.6 113 chr3R 29249635 intron SP1029 - chr3R 29249692 intron SP1029 - chr3R 29249748 intron SP1029 - chr3R_10_29245001 chr3R_29245001 RAL-392 2212 chr3R 29256245 29256300 chr3R 29256345 29256400 17 95 2.5 5.5 4.0 3.4 155 chr3R 29256245 intergenic CG45544 +,stg - chr3R 29256322 intergenic CG45544 + chr3R 29256400 intergenic CG45544 + chr3R_17_29255001 chr3R_29255001 RAL-392 2213 chr3R 29355936 29355991 chr3R 29356035 29356060 11 90 1.5 1.5 1.5 4.4 124 chr3R 29355936 intergenic CR45547 - chr3R 29355998 intergenic CR45547 - chr3R 29356060 intergenic CR45547 - chr3R_11_29355001 chr3R_29355001 RAL-392 2214 chr3R 29362850 29362861 chr3R 29362959 29362964 6 108 0.0 4.5 2.2 1.9 114 chr3R 29362850 intergenic not near genes chr3R 29362907 intergenic not near genes chr3R 29362964 intergenic not near genes chr3R_6_29360001 chr3R_29360001 RAL-392 2215 chr3R 29362866 29362887 chr3R 29362950 29362984 11 103 0.0 2.5 1.2 5.0 118 chr3R 29362866 intergenic not near genes chr3R 29362925 intergenic not near genes chr3R 29362984 intergenic not near genes chr3R_11_29360001 chr3R_29360001 RAL-392 2216 chr3R 29376341 29376365 chr3R 29376449 29376473 8 102 5.5 3.0 4.2 1.5 132 chr3R 29376341 intergenic not near genes chr3R 29376407 intergenic not near genes chr3R 29376473 intergenic not near genes chr3R_8_29375001 chr3R_29375001 RAL-392 2217 chr3R 29415609 29415614 chr3R 29415767 29415803 13 168 28.0 29.0 28.5 0.4 194 chr3R 29415609 intron Ptp99A + chr3R 29415706 intron Ptp99A + chr3R 29415803 intron Ptp99A + chr3R_13_29415001 chr3R_29415001 RAL-392 2218 chr3R 29505878 29505889 chr3R 29505975 29505986 5 97 22.0 6.5 14.2 0.3 108 chr3R 29505878 intergenic not near genes chr3R 29505932 intergenic not near genes chr3R 29505986 intergenic not near genes chr3R_5_29505001 chr3R_29505001 RAL-392 2219 chr3R 29505900 29505926 chr3R 29505970 29506011 6 90 11.5 6.0 8.8 0.6 111 chr3R 29505900 intergenic not near genes chr3R 29505956 intergenic not near genes chr3R 29506011 intergenic not near genes chr3R_6_29505001 chr3R_29505001 RAL-392 2220 chr3R 29511912 29511926 chr3R 29512022 29512036 8 110 10.0 1.0 5.5 1.2 124 chr3R 29511912 intergenic not near genes chr3R 29511974 intergenic not near genes chr3R 29512036 intergenic not near genes chr3R_8_29510001 chr3R_29510001 RAL-392 2221 chr3R 29526219 29526261 chr3R 29526321 29526354 9 97 2.5 3.5 3.0 2.2 135 chr3R 29526219 intergenic not near genes chr3R 29526286 intergenic not near genes chr3R 29526354 intergenic not near genes chr3R_9_29525001 chr3R_29525001 RAL-392 2222 chr3R 29538038 29538159 chr3R 29538136 29538239 10 94 0.0 0.0 0.0 10.0 201 chr3R 29538038 intergenic not near genes chr3R 29538138 intergenic not near genes chr3R 29538239 intergenic not near genes chr3R_10_29535001 chr3R_29535001 RAL-392 2223 chr3R 29738257 29738300 chr3R 29739729 29739767 hobo 11 1473 7.0 3.5 5.2 1.8 1510 chr3R 29738257 intergenic CG1969 +,CG7598 + chr3R 29739012 intron CG1969 + chr3R 29739767 5` UTR CG1969 + chr3R_11_29735001 chr3R_29735001 RAL-392 2224 chr3R 29760341 29760360 chr3R 29761562 29761581 pogo 9 1220 15.5 5.5 10.5 0.8 1240 chr3R 29760341 intergenic not near genes chr3R 29760961 intergenic not near genes chr3R 29761581 intergenic not near genes chr3R_9_29760001 chr3R_29760001 RAL-392 2225 chr3R 29760365 29760392 chr3R 29761561 29761613 pogo 10 1214 5.5 5.5 5.5 1.5 1248 chr3R 29760365 intergenic not near genes chr3R 29760989 intergenic not near genes chr3R 29761613 intergenic not near genes chr3R_10_29760001 chr3R_29760001 RAL-392 2226 chr3R 29768565 29768605 chr3R 29768656 29768685 4 84 0.0 7.0 3.5 0.9 120 chr3R 29768565 intron kay + chr3R 29768625 intron kay + chr3R 29768685 intron kay + chr3R_4_29765001 chr3R_29765001 RAL-392 2227 chr3R 29773874 29773907 chr3R 29773975 29773978 9 97 1.5 0.0 0.8 5.0 104 chr3R 29773874 intron kay + chr3R 29773926 intron kay + chr3R 29773978 intron kay + chr3R_9_29770001 chr3R_29770001 RAL-392 2228 chr3R 29782254 29782262 chr3R 29782345 29782356 4 92 3.0 7.0 5.0 0.7 102 chr3R 29782254 intron kay + chr3R 29782305 intron kay + chr3R 29782356 intron kay + chr3R_4_29780001 chr3R_29780001 RAL-392 2229 chr3R 29782272 29782288 chr3R 29782339 29782384 6 85 1.0 5.5 3.2 1.4 112 chr3R 29782272 intron kay + chr3R 29782328 intron kay + chr3R 29782384 intron kay + chr3R_6_29780001 chr3R_29780001 RAL-392 2230 chr3R 29782620 29782656 chr3R 29782710 29782760 9 101 0.0 3.0 1.5 3.6 140 chr3R 29782620 intron kay + chr3R 29782690 intron kay + chr3R 29782760 intron kay + chr3R_9_29780001 chr3R_29780001 RAL-392 2231 chr3R 29882005 29882036 chr3R 29891182 29891213 roo 10 9177 4.5 8.5 6.5 1.3 9208 chr3R 29882005 intron CG31038 + chr3R 29886609 intron CG31038 + chr3R 29891213 intron CG31038 + chr3R_10_29885001 chr3R_29885001 RAL-392 2232 chr3R 29882042 29882051 chr3R 29891174 29891178 roo 6 9153 3.0 7.5 5.2 1.0 9136 chr3R 29882042 intron CG31038 + chr3R 29886610 intron CG31038 + chr3R 29891178 intron CG31038 + chr3R_6_29885001 chr3R_29885001 RAL-392 2233 chr3R 29923646 29923692 chr3R 29925231 29925277 13 1588 23.5 54.0 38.8 0.3 1631 chr3R 29923646 intergenic Jon99Cii -,Jon99Ciii + chr3R 29924462 exon Jon99Cii - chr3R 29925277 3` UTR Jon99Ci - chr3R_13_29920001 chr3R_29920001 RAL-392 2234 chr3R 29963473 29963511 chr3R 29963587 29963608 6 101 4.0 6.5 5.2 1.0 135 chr3R 29963473 intron TkR99D - chr3R 29963540 intron TkR99D - chr3R 29963608 intron TkR99D - chr3R_6_29960001 chr3R_29960001 RAL-392 2235 chr3R 30032147 30032179 chr3R 30032240 30032254 6 89 3.0 5.5 4.2 1.2 107 chr3R 30032147 intron Axn + chr3R 30032200 intron Axn + chr3R 30032254 intron Axn + chr3R_6_30030001 chr3R_30030001 RAL-392 2236 chr3R 30080439 30080482 chr3R 30080538 30080581 9 94 0.5 5.0 2.8 2.4 142 chr3R 30080439 intron sima + chr3R 30080510 intron sima + chr3R 30080581 intron sima + chr3R_9_30080001 chr3R_30080001 RAL-392 2237 chr3R 30084850 30084874 chr3R 30086322 30086351 hobo 10 1476 2.5 2.5 2.5 2.9 1501 chr3R 30084850 intron sima + chr3R 30085600 intron sima + chr3R 30086351 intron sima + chr3R_10_30085001 chr3R_30085001 RAL-392 2238 chr3R 30147544 30147565 chr3R 30147626 30147658 5 88 3.0 5.0 4.0 1.0 114 chr3R 30147544 intron AdoR - chr3R 30147601 intron AdoR - chr3R 30147658 intron AdoR - chr3R_5_30145001 chr3R_30145001 RAL-392 2239 chr3R 30148038 30148082 chr3R 30148389 30148393 5 333 3.5 0.0 1.8 1.8 355 chr3R 30148038 intron AdoR - chr3R 30148216 intron AdoR - chr3R 30148393 intron AdoR - chr3R_5_30145001 chr3R_30145001 RAL-392 2240 chr3R 30170659 30170678 chr3R 30170782 30170804 8 123 5.5 5.0 5.2 1.3 145 chr3R 30170659 exon CG31028 - chr3R 30170732 intron CG31028 - chr3R 30170804 intron CG31028 - chr3R_8_30170001 chr3R_30170001 RAL-392 2241 chr3R 30238743 30238793 chr3R 30239927 30239977 1360 20 1179 4.0 6.0 5.0 3.3 1234 chr3R 30238743 intergenic not near genes chr3R 30239360 intergenic not near genes chr3R 30239977 intergenic not near genes chr3R_20_30235001 chr3R_30235001 RAL-392 2242 chr3R 30252335 30252518 chr3R 30252681 30252682 4 310 29.0 8.0 18.5 0.2 347 chr3R 30252335 exon CG9682 + chr3R 30252508 exon CG9682 + chr3R 30252682 exon CG9682 + chr3R_4_30250001 chr3R_30250001 RAL-392 2243 chr3R 30262571 30262608 chr3R 30262673 30262679 9 97 0.5 1.5 1.0 4.5 108 chr3R 30262571 intergenic not near genes chr3R 30262625 intergenic not near genes chr3R 30262679 intergenic not near genes chr3R_9_30260001 chr3R_30260001 RAL-392 2244 chr3R 30268429 30268447 chr3R 30268502 30268518 7 73 0.5 5.0 2.8 1.8 89 chr3R 30268429 intergenic not near genes chr3R 30268474 intergenic not near genes chr3R 30268518 intergenic not near genes chr3R_7_30265001 chr3R_30265001 RAL-392 2245 chr3R 30272529 30272538 chr3R 30272613 30272618 6 93 4.0 5.5 4.8 1.0 89 chr3R 30272529 intergenic not near genes chr3R 30272574 intergenic not near genes chr3R 30272618 intergenic not near genes chr3R_6_30270001 chr3R_30270001 RAL-392 2246 chr3R 30317331 30317352 chr3R 30324916 30324918 roo 4 7590 0.0 3.5 1.8 1.4 7587 chr3R 30317331 intron hdc + chr3R 30321124 intron hdc + chr3R 30324918 intron hdc + chr3R_4_30320001 chr3R_30320001 RAL-392 2247 chr3R 30375523 30375571 chr3R 30383168 30383206 412 13 7642 4.5 3.0 3.8 2.7 7683 chr3R 30375523 intergenic not near genes chr3R 30379364 intergenic not near genes chr3R 30383206 intergenic not near genes chr3R_13_30375001 chr3R_30375001 RAL-392 2248 chr3R 30396197 30396239 chr3R 30404483 30404511 roo 8 8282 4.5 4.0 4.2 1.5 8314 chr3R 30396197 intergenic not near genes chr3R 30400354 intergenic not near genes chr3R 30404511 5` UTR CR45570 + chr3R_8_30400001 chr3R_30400001 RAL-392 2249 chr3R 30564013 30564058 chr3R 30565595 30565605 5 1570 3.5 6.5 5.0 0.8 1592 chr3R 30564013 intron tmod + chr3R 30564809 intron tmod + chr3R 30565605 intron tmod + chr3R_5_30560001 chr3R_30560001 RAL-392 2250 chr3R 30627627 30627638 chr3R 30627682 30627693 6 67 5.0 4.5 4.8 1.0 66 chr3R 30627627 exon CG2267 - chr3R 30627660 exon CG2267 - chr3R 30627693 exon CG2267 - chr3R_6_30625001 chr3R_30625001 RAL-392 2251 chr3R 30649852 30649876 chr3R 30649926 30649977 9 95 4.0 0.5 2.2 2.8 125 chr3R 30649852 3` UTR CG34432 + chr3R 30649914 intergenic CG34432 +,CG34433 + chr3R 30649977 exon CG34433 + chr3R_9_30645001 chr3R_30645001 RAL-392 2252 chr3R 30650789 30650803 chr3R 30650905 30650920 6 117 0.5 1.0 0.8 3.3 131 chr3R 30650789 3` UTR CG34433 + chr3R 30650854 3` UTR CG34433 + chr3R 30650920 intergenic CG34433 + chr3R_6_30650001 chr3R_30650001 RAL-392 2253 chr3R 30679542 30679549 chr3R 30687014 30687038 blood 4 7480 2.5 7.0 4.8 0.7 7496 chr3R 30679542 intergenic not near genes chr3R 30683290 intergenic not near genes chr3R 30687038 intergenic not near genes chr3R_4_30680001 chr3R_30680001 RAL-392 2254 chr3R 30690149 30690184 chr3R 30690253 30690263 11 97 3.5 1.5 2.5 3.1 114 chr3R 30690149 intergenic Spn100A + chr3R 30690206 intergenic Spn100A + chr3R 30690263 intergenic Spn100A + chr3R_11_30690001 chr3R_30690001 RAL-392 2255 chr3R 30791899 30791944 chr3R 30792027 30792050 22 116 1.5 7.0 4.2 4.2 151 chr3R 30791899 exon wts - chr3R 30791974 intron wts - chr3R 30792050 exon wts - chr3R_22_30790001 chr3R_30790001 RAL-392 2256 chr3R 30818792 30818841 chr3R 30820376 30820426 1360 17 1579 7.5 8.0 7.8 1.9 1634 chr3R 30818792 intron cindr + chr3R 30819609 intron cindr + chr3R 30820426 intron cindr + chr3R_17_30815001 chr3R_30815001 RAL-392 2257 chr3R 30874368 30874420 chr3R 30874471 30874522 13 98 0.5 4.0 2.2 4.1 154 chr3R 30874368 3` UTR CG15546 - chr3R 30874445 3` UTR CG15546 - chr3R 30874522 3` UTR CG15546 - chr3R_13_30870001 chr3R_30870001 RAL-392 2258 chr3R 30900535 30900553 chr3R 30900607 30900623 5 81 4.5 4.0 4.2 1.0 88 chr3R 30900535 3` UTR Cyp4c3 + chr3R 30900579 3` UTR Cyp4c3 + chr3R 30900623 3` UTR Cyp4c3 + chr3R_5_30900001 chr3R_30900001 RAL-392 2259 chr3R 30917021 30917052 chr3R 30917120 30917151 7 99 3.0 6.0 4.5 1.3 130 chr3R 30917021 intron Ptx1 + chr3R 30917086 intron Ptx1 + chr3R 30917151 intron Ptx1 + chr3R_7_30915001 chr3R_30915001 RAL-392 2260 chr3R 30917061 30917074 chr3R 30917118 30917173 4 68 2.0 5.5 3.8 0.8 112 chr3R 30917061 intron Ptx1 + chr3R 30917117 intron Ptx1 + chr3R 30917173 intron Ptx1 + chr3R_4_30915001 chr3R_30915001 RAL-392 2261 chr3R 30967285 30967303 chr3R 30967381 30967404 6 99 1.5 6.0 3.8 1.2 119 chr3R 30967285 intergenic not near genes chr3R 30967344 intergenic not near genes chr3R 30967404 intergenic not near genes chr3R_6_30965001 chr3R_30965001 RAL-392 2262 chr3R 30973116 30973160 chr3R 30973292 30973313 4 166 3.0 3.0 3.0 1.0 197 chr3R 30973116 intron 5-HT7 - chr3R 30973214 intron 5-HT7 - chr3R 30973313 intron 5-HT7 - chr3R_4_30970001 chr3R_30970001 RAL-392 2263 chr3R 31026471 31026512 chr3R 31026570 31026586 7 91 5.5 2.5 4.0 1.4 115 chr3R 31026471 intergenic not near genes chr3R 31026528 intergenic not near genes chr3R 31026586 intergenic not near genes chr3R_7_31025001 chr3R_31025001 RAL-392 2264 chr3R 31042093 31042124 chr3R 31042200 31042226 6 102 7.0 6.5 6.8 0.8 133 chr3R 31042093 intron CanA1 + chr3R 31042160 intron CanA1 + chr3R 31042226 intron CanA1 + chr3R_6_31040001 chr3R_31040001 RAL-392 2265 chr3R 31042125 31042141 chr3R 31042199 31042248 8 96 2.0 6.5 4.2 1.5 123 chr3R 31042125 intron CanA1 + chr3R 31042186 intron CanA1 + chr3R 31042248 intron CanA1 + chr3R_8_31040001 chr3R_31040001 RAL-392 2266 chr3R 31074212 31074259 chr3R 31081830 31081832 springer 11 7609 6.0 3.5 4.8 1.9 7620 chr3R 31074212 intron Sox100B + chr3R 31078022 intron Sox100B + chr3R 31081832 intron Sox100B + chr3R_11_31075001 chr3R_31075001 RAL-392 2267 chr3R 31119633 31119653 chr3R 31119749 31119769 10 115 3.0 0.0 1.5 4.0 136 chr3R 31119633 intergenic not near genes chr3R 31119701 intergenic not near genes chr3R 31119769 intergenic not near genes chr3R_10_31115001 chr3R_31115001 RAL-392 2268 chr3R 31137149 31137184 chr3R 31137238 31137271 13 90 1.5 3.0 2.2 4.1 122 chr3R 31137149 intron Gycbeta100B + chr3R 31137210 intron Gycbeta100B + chr3R 31137271 intron Gycbeta100B + chr3R_13_31135001 chr3R_31135001 RAL-392 2269 chr3R 31146829 31146875 chr3R 31146966 31147017 13 130 9.0 9.0 9.0 1.3 188 chr3R 31146829 intron Gycbeta100B + chr3R 31146923 intron Gycbeta100B + chr3R 31147017 intron Gycbeta100B + chr3R_13_31145001 chr3R_31145001 RAL-392 2270 chr3R 31159569 31159590 chr3R 31159724 31159740 6 146 0.5 9.5 5.0 1.0 171 chr3R 31159569 intron,intron Gycbeta100B +,stops - chr3R 31159654 intron,intron Gycbeta100B +,stops - chr3R 31159740 intron,intron Gycbeta100B +,stops - chr3R_6_31155001 chr3R_31155001 RAL-392 2271 chr3R 31205843 31205878 chr3R 31207133 31207140 11 1291 38.0 30.5 34.2 0.3 1297 chr3R 31205843 exon chp - chr3R 31206492 exon chp - chr3R 31207140 exon chp - chr3R_11_31205001 chr3R_31205001 RAL-392 2272 chr3R 31201921 31201937 chr3R 31208662 31208691 7 6743 23.0 41.0 32.0 0.2 6770 chr3R 31201921 exon CG1544 + chr3R 31205306 intron chp - chr3R 31208691 exon chp - chr3R_7_31205001 chr3R_31205001 RAL-392 2273 chr3R 31265267 31265292 chr3R 31265431 31265438 5 160 11.0 2.0 6.5 0.7 171 chr3R 31265267 intergenic ppk24 + chr3R 31265352 intergenic ppk24 + chr3R 31265438 intergenic ppk24 + chr3R_5_31265001 chr3R_31265001 RAL-392 2274 chr3R 31279372 31279407 chr3R 31285562 31285564 diver 10 6182 2.0 2.0 2.0 3.3 6192 chr3R 31279372 intergenic not near genes chr3R 31282468 intergenic not near genes chr3R 31285564 intergenic not near genes chr3R_10_31280001 chr3R_31280001 RAL-392 2275 chr3R 31346738 31346747 chr3R 31346816 31346846 4 85 5.0 6.0 5.5 0.6 108 chr3R 31346738 intron CG34347 + chr3R 31346792 intron CG34347 + chr3R 31346846 intron CG34347 + chr3R_4_31345001 chr3R_31345001 RAL-392 2276 chr3R 31385173 31385211 chr3R 31385310 31385346 10 134 1.5 2.0 1.8 3.6 173 chr3R 31385173 intron CG1607 + chr3R 31385260 intron CG1607 + chr3R 31385346 intron CG1607 + chr3R_10_31385001 chr3R_31385001 RAL-392 2277 chr3R 31413089 31413113 chr3R 31418291 31418309 copia 6 5200 2.0 3.0 2.5 1.7 5220 chr3R 31413089 intron Gprk2 + chr3R 31415699 intron Gprk2 + chr3R 31418309 intron Gprk2 + chr3R_6_31415001 chr3R_31415001 RAL-392 2278 chr3R 31426881 31426910 chr3R 31426968 31427022 8 106 5.5 5.0 5.2 1.3 141 chr3R 31426881 intron Gprk2 + chr3R 31426952 intron Gprk2 + chr3R 31427022 intron Gprk2 + chr3R_8_31425001 chr3R_31425001 RAL-392 2279 chr3R 31435344 31435389 chr3R 31435516 31435521 13 160 8.5 9.0 8.8 1.3 177 chr3R 31435344 intron Gprk2 + chr3R 31435432 intron Gprk2 + chr3R 31435521 intron Gprk2 + chr3R_13_31435001 chr3R_31435001 RAL-392 2280 chr3R 31453205 31453250 chr3R 31453295 31453348 24 93 10.5 10.0 10.2 2.1 143 chr3R 31453205 intron Gprk2 + chr3R 31453276 intron Gprk2 + chr3R 31453348 exon Gprk2 + chr3R_24_31450001 chr3R_31450001 RAL-392 2281 chr3R 31477365 31477387 chr3R 31477543 31477555 6 179 2.5 2.5 2.5 1.7 190 chr3R 31477365 intergenic not near genes chr3R 31477460 intergenic not near genes chr3R 31477555 intergenic not near genes chr3R_6_31475001 chr3R_31475001 RAL-392 2282 chr3R 31637843 31637896 chr3R 31637951 31637999 9 100 8.0 10.5 9.2 0.9 156 chr3R 31637843 intron kek6 + chr3R 31637921 intron kek6 + chr3R 31637999 intron kek6 + chr3R_9_31635001 chr3R_31635001 RAL-392 2283 chr3R 31670587 31670634 chr3R 31670701 31670748 19 114 3.0 2.0 2.5 5.4 161 chr3R 31670587 intron CG1815 + chr3R 31670668 intron CG1815 + chr3R 31670748 intron CG1815 + chr3R_19_31670001 chr3R_31670001 RAL-392 2284 chr3R 31691540 31691540 chr3R 31696298 31696324 Doc 4 4771 7.5 5.5 6.5 0.5 4784 chr3R 31691540 intergenic not near genes chr3R 31693932 intergenic not near genes chr3R 31696324 intergenic not near genes chr3R_4_31690001 chr3R_31690001 RAL-392 2285 chr3R 31691541 31691563 chr3R 31696297 31696328 Doc 12 4762 3.0 5.5 4.2 2.3 4787 chr3R 31691541 intergenic not near genes chr3R 31693934 intergenic not near genes chr3R 31696328 intergenic not near genes chr3R_12_31690001 chr3R_31690001 RAL-392 2286 chr3R 31699715 31699752 chr3R 31699817 31699817 4 90 0.5 3.0 1.8 1.4 102 chr3R 31699715 intergenic not near genes chr3R 31699766 intergenic not near genes chr3R 31699817 intergenic not near genes chr3R_4_31695001 chr3R_31695001 RAL-392 2287 chr3R 31831537 31831570 chr3R 31831620 31831669 12 87 3.0 4.5 3.8 2.5 132 chr3R 31831537 intron RhoGAP100F + chr3R 31831603 intron RhoGAP100F + chr3R 31831669 intron RhoGAP100F + chr3R_12_31830001 chr3R_31830001 RAL-392 2288 chr3R 31865026 31865065 chr3R 31865124 31865161 4 99 0.0 2.5 1.2 1.8 135 chr3R 31865026 intron heph - chr3R 31865094 intron heph - chr3R 31865161 exon heph - chr3R_4_31865001 chr3R_31865001 RAL-392 2289 chr3R 31870633 31870682 chr3R 31870744 31870773 8 100 3.0 2.5 2.8 2.1 140 chr3R 31870633 intron heph - chr3R 31870703 intron heph - chr3R 31870773 intron heph - chr3R_8_31870001 chr3R_31870001 RAL-392 2290 chr3R 31925672 31925722 chr3R 31925766 31925806 9 87 5.0 4.5 4.8 1.6 134 chr3R 31925672 intron heph - chr3R 31925739 intron heph - chr3R 31925806 intron heph - chr3R_9_31925001 chr3R_31925001 RAL-392 2291 chr3R 31931186 31931211 chr3R 31931289 31931314 7 103 2.5 3.5 3.0 1.8 128 chr3R 31931186 intron heph - chr3R 31931250 intron heph - chr3R 31931314 intron heph - chr3R_7_31930001 chr3R_31930001 RAL-392 2292 chr3R 31949486 31949534 chr3R 31949592 31949626 13 99 0.5 3.5 2.0 4.3 140 chr3R 31949486 intron heph - chr3R 31949556 intron heph - chr3R 31949626 intron heph - chr3R_13_31945001 chr3R_31945001 RAL-392 2293 chr3R 31991085 31991126 chr3R 31991184 31991225 14 96 6.5 3.5 5.0 2.3 140 chr3R 31991085 intron heph - chr3R 31991155 intron heph - chr3R 31991225 intron heph - chr3R_14_31990001 chr3R_31990001 RAL-392 2294 chr3R 31997983 31998021 chr3R 32005473 32005511 blood 9 7483 3.5 5.5 4.5 1.6 7528 chr3R 31997983 intron heph - chr3R 32001747 intron heph - chr3R 32005511 intron heph - chr3R_9_32000001 chr3R_32000001 RAL-392 2295 chr3R 32022328 32022355 chr3R 32022425 32022444 9 104 4.0 8.5 6.2 1.2 116 chr3R 32022328 5` UTR CR45557 + chr3R 32022386 5` UTR CR45557 + chr3R 32022444 5` UTR CR45557 + chr3R_9_32020001 chr3R_32020001 RAL-392 2296 chr3R 32045556 32045599 chr3R 32045657 32045700 9 98 5.0 8.0 6.5 1.2 144 chr3R 32045556 3` UTR krz - chr3R 32045628 3` UTR krz - chr3R 32045700 3` UTR krz - chr3R_9_32045001 chr3R_32045001 RAL-392 2297 chr4 97441 97493 chr4 97598 97650 18 153 3.0 4.0 3.5 4.0 209 chr4 97441 intron pan + chr4 97546 intron pan + chr4 97650 intron pan + chr4_18_95001 chr4_95001 RAL-392 2298 chr4 257381 257438 chr4 257571 257628 15 186 2.5 5.0 3.8 3.1 247 chr4 257381 exon RhoGAP102A + chr4 257504 intron RhoGAP102A + chr4 257628 intron RhoGAP102A + chr4_15_255001 chr4_255001 RAL-392 2299 chr4 293852 293892 chr4 294115 294142 7 260 5.0 3.5 4.2 1.3 290 chr4 293852 intron Syt7 - chr4 293997 intron Syt7 - chr4 294142 intron Syt7 - chr4_7_290001 chr4_290001 RAL-392 2300 chr4 314500 314528 chr4 314598 314626 8 96 6.0 6.0 6.0 1.1 126 chr4 314500 intergenic Zip102B -,CG32850 + chr4 314563 intergenic CG32850 +,Zip102B - chr4 314626 intergenic CG32850 + chr4_8_310001 chr4_310001 RAL-392 2301 chr4 319981 320016 chr4 328164 328211 Stalker2 14 8194 9.0 3.5 6.2 1.9 8230 chr4 319981 3` UTR CG32850 + chr4 324096 intron CG32850 + chr4 328211 3` UTR,3` UTR CG32850 +,PMCA - chr4_14_320001 chr4_320001 RAL-392 2302 chr4 671585 671629 chr4 680187 680192 Tirant 6 8590 4.0 12.0 8.0 0.7 8607 chr4 671585 intron CG11360 + chr4 675888 intron CG11360 + chr4 680192 intron CG11360 + chr4_6_675001 chr4_675001 RAL-392 2303 chr4 959610 959626 chr4 959809 959825 6 198 14.0 5.0 9.5 0.6 215 chr4 959610 intergenic CR44030 +,CR45201 - chr4 959718 5` UTR CR44030 + chr4 959825 5` UTR CR44030 + chr4_6_955001 chr4_955001 RAL-392 2304 chr4 959632 959654 chr4 959806 959815 7 184 5.0 5.0 5.0 1.2 183 chr4 959632 intergenic CR44030 +,CR45201 - chr4 959724 5` UTR CR44030 + chr4 959815 5` UTR CR44030 + chr4_7_955001 chr4_955001 RAL-392 2305 chr4 1187210 1187230 chr4 1187365 1187379 4 150 7.5 7.0 7.2 0.5 169 chr4 1187210 intron CG33521 + chr4 1187294 intron CG33521 + chr4 1187379 intron CG33521 + chr4_4_1185001 chr4_1185001 RAL-392 2306 chr4 1187234 1187252 chr4 1187364 1187405 5 143 4.0 7.0 5.5 0.8 171 chr4 1187234 intron CG33521 + chr4 1187320 intron CG33521 + chr4 1187405 intron CG33521 + chr4_5_1185001 chr4_1185001 RAL-392 2307 chrX 292427 292432 chrX 293066 293108 G3 7 647 5.0 19.5 12.2 0.5 681 chrX 292427 intron,intron CG3777 +,CG13375 - chrX 292768 intron,intron CG3777 +,CG13375 - chrX 293108 intron,intron CG3777 +,CG13375 - chrX_7_290001 chrX_290001 RAL-392 2308 chrX 295845 295882 chrX 303485 303493 412 4 7633 3.0 4.0 3.5 0.9 7648 chrX 295845 intron CG3777 + chrX 299669 intron CG3777 + chrX 303493 intron CG3777 + chrX_4_295001 chrX_295001 RAL-392 2309 chrX 318456 318497 chrX 323562 323601 flea 13 5103 5.0 6.0 5.5 2.0 5145 chrX 318456 intron,intron CG3777 +,CG32816 - chrX 321028 intron,intron CG3777 +,CG32816 - chrX 323601 intron,intron CG3777 +,CG32816 - chrX_13_320001 chrX_320001 RAL-392 2310 chrX 428415 428425 chrX 434610 434630 3S18 6 6202 12.5 6.0 9.2 0.6 6215 chrX 428415 intron CG32816 - chrX 431522 intron CG32816 - chrX 434630 intron CG32816 - chrX_6_430001 chrX_430001 RAL-392 2311 chrX 428429 428443 chrX 434609 434643 3S18 4 6197 11.0 5.5 8.2 0.4 6214 chrX 428429 intron CG32816 - chrX 431536 intron CG32816 - chrX 434643 intron CG32816 - chrX_4_430001 chrX_430001 RAL-392 2312 chrX 428444 428452 chrX 434603 434655 3S18 4 6190 9.5 5.0 7.2 0.5 6211 chrX 428444 intron CG32816 - chrX 431550 intron CG32816 - chrX 434655 intron CG32816 - chrX_4_430001 chrX_430001 RAL-392 2313 chrX 440974 441019 chrX 441071 441117 13 97 5.0 1.0 3.0 3.2 143 chrX 440974 intron CG32816 - chrX 441046 intron CG32816 - chrX 441117 intron CG32816 - chrX_13_440001 chrX_440001 RAL-392 2314 chrX 450344 450394 chrX 450442 450492 17 98 3.5 4.0 3.8 3.5 148 chrX 450344 intron CG32816 - chrX 450418 intron CG32816 - chrX 450492 intron CG32816 - chrX_17_450001 chrX_450001 RAL-392 2315 chrX 494585 494594 chrX 494697 494706 4 112 16.0 6.0 11.0 0.3 121 chrX 494585 intergenic CG17778 + chrX 494646 5` UTR CG17778 + chrX 494706 5` UTR CG17778 + chrX_4_490001 chrX_490001 RAL-392 2316 chrX 494598 494627 chrX 494692 494739 7 105 8.0 5.0 6.5 0.9 141 chrX 494598 intergenic CG17778 + chrX 494668 5` UTR CG17778 + chrX 494739 intron CG17778 + chrX_7_490001 chrX_490001 RAL-392 2317 chrX 547613 547665 chrX 547877 547914 16 260 3.0 6.0 4.5 2.9 301 chrX 547613 intron Appl + chrX 547764 intron Appl + chrX 547914 intron Appl + chrX_16_545001 chrX_545001 RAL-392 2318 chrX 667635 667640 chrX 667732 667744 4 101 8.0 2.5 5.2 0.6 109 chrX 667635 intergenic not near genes chrX 667690 intergenic not near genes chrX 667744 intergenic not near genes chrX_4_665001 chrX_665001 RAL-392 2319 chrX 667641 667681 chrX 667729 667760 15 96 4.0 2.5 3.2 3.6 119 chrX 667641 intergenic not near genes chrX 667700 intergenic not near genes chrX 667760 intergenic not near genes chrX_15_665001 chrX_665001 RAL-392 2320 chrX 670273 670296 chrX 670346 670388 11 84 0.0 2.0 1.0 5.5 115 chrX 670273 intergenic not near genes chrX 670330 intergenic not near genes chrX 670388 intergenic not near genes chrX_11_670001 chrX_670001 RAL-392 2321 chrX 680821 680860 chrX 680924 680932 4 94 2.5 2.0 2.2 1.2 111 chrX 680821 intergenic not near genes chrX 680876 intergenic not near genes chrX 680932 intergenic not near genes chrX_4_680001 chrX_680001 RAL-392 2322 chrX 695293 695319 chrX 695379 695386 9 87 4.5 3.0 3.8 1.9 93 chrX 695293 intron sdk + chrX 695340 intron sdk + chrX 695386 intron sdk + chrX_9_695001 chrX_695001 RAL-392 2323 chrX 778133 778145 chrX 778218 778224 5 84 5.0 1.5 3.2 1.2 91 chrX 778133 intron fz3 + chrX 778178 intron fz3 + chrX 778224 intron fz3 + chrX_5_775001 chrX_775001 RAL-392 2324 chrX 806771 806818 chrX 806883 806934 9 99 4.0 0.5 2.2 2.8 163 chrX 806771 intron Sec22 + chrX 806852 intron Sec22 + chrX 806934 intron Sec22 + chrX_9_805001 chrX_805001 RAL-392 2325 chrX 812271 812278 chrX 817899 817927 297 4 5643 5.5 3.0 4.2 0.8 5656 chrX 812271 intron CG43867 - chrX 815099 intron CG43867 - chrX 817927 intron CG43867 - chrX_4_815001 chrX_815001 RAL-392 2326 chrX 812281 812283 chrX 817898 817923 297 4 5633 4.0 3.0 3.5 0.9 5642 chrX 812281 intron CG43867 - chrX 815102 intron CG43867 - chrX 817923 intron CG43867 - chrX_4_815001 chrX_815001 RAL-392 2327 chrX 827599 827634 chrX 835391 835424 roo 13 7798 4.5 5.0 4.8 2.2 7825 chrX 827599 intron CG43867 - chrX 831512 intron CG43867 - chrX 835424 intron CG43867 - chrX_13_830001 chrX_830001 RAL-392 2328 chrX 868481 868518 chrX 868578 868590 6 81 2.0 4.0 3.0 1.5 109 chrX 868481 intron CG43867 - chrX 868536 intron CG43867 - chrX 868590 intron CG43867 - chrX_6_865001 chrX_865001 RAL-392 2329 chrX 906682 906711 chrX 908491 908520 S-element 6 1807 2.5 2.0 2.2 1.9 1838 chrX 906682 intron CG43867 - chrX 907601 intron CG43867 - chrX 908520 intron CG43867 - chrX_6_905001 chrX_905001 RAL-392 2330 chrX 1063741 1063750 chrX 1072554 1072563 roo 5 8813 9.0 3.5 6.2 0.7 8822 chrX 1063741 intron CR44779 + chrX 1068152 intron CR44779 + chrX 1072563 intron CR44779 + chrX_5_1065001 chrX_1065001 RAL-392 2331 chrX 1150557 1150584 chrX 1151008 1151046 9 459 3.0 2.5 2.8 2.4 489 chrX 1150557 intergenic not near genes chrX 1150802 intergenic not near genes chrX 1151046 intergenic not near genes chrX_9_1150001 chrX_1150001 RAL-392 2332 chrX 1205533 1205557 chrX 1205610 1205631 6 85 2.0 1.0 1.5 2.4 98 chrX 1205533 intergenic CG11381 + chrX 1205582 intergenic CG11381 + chrX 1205631 intergenic CG11381 + chrX_6_1205001 chrX_1205001 RAL-392 2333 chrX 1357761 1357798 chrX 1367951 1367988 Doc 4 10190 8.5 4.5 6.5 0.5 10227 chrX 1357761 intergenic png - chrX 1362874 intergenic not near genes chrX 1367988 intergenic not near genes chrX_4_1360001 chrX_1360001 RAL-392 2334 chrX 1428571 1428625 chrX 1428677 1428681 13 94 5.5 2.5 4.0 2.6 110 chrX 1428571 intron futsch + chrX 1428626 intron futsch + chrX 1428681 intron futsch + chrX_13_1425001 chrX_1425001 RAL-392 2335 chrX 1518038 1518076 chrX 1523442 1523468 jockey 8 5413 1.0 2.5 1.8 2.9 5430 chrX 1518038 intergenic inc + chrX 1520753 intergenic not near genes chrX 1523468 intergenic not near genes chrX_8_1520001 chrX_1520001 RAL-392 2336 chrX 1627985 1628006 chrX 1635456 1635462 gtwin 4 7470 1.5 3.5 2.5 1.1 7477 chrX 1627985 intron,intron Mur2B -,br + chrX 1631724 intron,intron Mur2B -,br + chrX 1635462 intron,intron Mur2B -,br + chrX_4_1630001 chrX_1630001 RAL-392 2337 chrX 1674841 1674883 chrX 1674937 1674942 6 85 5.0 2.0 3.5 1.3 101 chrX 1674841 3` UTR CG32809 - chrX 1674892 3` UTR CG32809 - chrX 1674942 3` UTR CG32809 - chrX_6_1670001 chrX_1670001 RAL-392 2338 chrX 1726659 1726680 chrX 1726773 1726807 8 118 4.0 2.0 3.0 2.0 148 chrX 1726659 intergenic not near genes chrX 1726733 intergenic not near genes chrX 1726807 intergenic not near genes chrX_8_1725001 chrX_1725001 RAL-392 2339 chrX 1930518 1930567 chrX 1938108 1938121 opus 12 7585 6.5 8.5 7.5 1.4 7603 chrX 1930518 intergenic CG11596 + chrX 1934320 intergenic not near genes chrX 1938121 3` UTR CG3857 - chrX_12_1930001 chrX_1930001 RAL-392 2340 chrX 2096380 2096390 chrX 2096464 2096473 4 86 3.0 0.5 1.8 1.4 93 chrX 2096380 intron csw + chrX 2096426 intron csw + chrX 2096473 intron csw + chrX_4_2095001 chrX_2095001 RAL-392 2341 chrX 2146635 2146687 chrX 2146747 2146795 5 96 3.5 2.0 2.8 1.3 160 chrX 2146635 intron Pgd + chrX 2146715 intron Pgd + chrX 2146795 intron Pgd + chrX_5_2145001 chrX_2145001 RAL-392 2342 chrX 2419683 2419726 chrX 2419791 2419826 9 103 2.5 2.5 2.5 2.6 143 chrX 2419683 intergenic not near genes chrX 2419754 intergenic not near genes chrX 2419826 intergenic not near genes chrX_9_2415001 chrX_2415001 RAL-392 2343 chrX 2506489 2506534 chrX 2506590 2506634 4 96 0.0 2.0 1.0 2.0 145 chrX 2506489 intron trol - chrX 2506562 intron trol - chrX 2506634 intron trol - chrX_4_2505001 chrX_2505001 RAL-392 2344 chrX 2535805 2535851 chrX 2535901 2535915 9 87 2.5 3.0 2.8 2.4 110 chrX 2535805 intron trol - chrX 2535860 intron trol - chrX 2535915 intron trol - chrX_9_2535001 chrX_2535001 RAL-392 2345 chrX 2578804 2578845 chrX 2578899 2578923 9 96 2.5 2.0 2.2 2.8 119 chrX 2578804 intergenic Pdfr +,Vha36-3 - chrX 2578864 intergenic Pdfr +,Vha36-3 - chrX 2578923 intergenic Vha36-3 -,Pdfr + chrX_9_2575001 chrX_2575001 RAL-392 2346 chrX 2635352 2635402 chrX 2635481 2635524 21 118 3.0 7.0 5.0 3.5 172 chrX 2635352 intron sgg + chrX 2635438 intron sgg + chrX 2635524 intron sgg + chrX_21_2635001 chrX_2635001 RAL-392 2347 chrX 2664367 2664419 chrX 2665533 2665543 1360 16 1158 5.5 8.0 6.8 2.1 1176 chrX 2664367 intron sgg + chrX 2664955 intron sgg + chrX 2665543 intron sgg + chrX_16_2660001 chrX_2660001 RAL-392 2348 chrX 2841276 2841305 chrX 2841371 2841408 6 105 4.0 0.5 2.2 1.9 132 chrX 2841276 intron kirre + chrX 2841342 intron kirre + chrX 2841408 intron kirre + chrX_6_2840001 chrX_2840001 RAL-392 2349 chrX 2844882 2844932 chrX 2852311 2852362 mdg1 10 7426 1.5 2.5 2.0 3.3 7480 chrX 2844882 intron kirre + chrX 2848622 intron kirre + chrX 2852362 intron kirre + chrX_10_2845001 chrX_2845001 RAL-392 2350 chrX 3058003 3058035 chrX 3058264 3058293 pogo 6 260 6.5 3.5 5.0 1.0 290 chrX 3058003 intron kirre + chrX 3058148 intron kirre + chrX 3058293 intron kirre + chrX_6_3055001 chrX_3055001 RAL-392 2351 chrX 3075617 3075633 chrX 3080944 3080959 Transpac 4 5326 6.5 2.0 4.2 0.8 5342 chrX 3075617 intron kirre + chrX 3078288 intron kirre + chrX 3080959 intron kirre + chrX_4_3075001 chrX_3075001 RAL-392 2352 chrX 3075636 3075659 chrX 3080941 3080963 Transpac 8 5313 5.5 2.0 3.8 1.7 5327 chrX 3075636 intron kirre + chrX 3078300 intron kirre + chrX 3080963 intron kirre + chrX_8_3075001 chrX_3075001 RAL-392 2353 chrX 3107731 3107773 chrX 3107840 3107864 9 98 2.5 1.0 1.8 3.2 133 chrX 3107731 intron kirre + chrX 3107798 intron kirre + chrX 3107864 intron kirre + chrX_9_3105001 chrX_3105001 RAL-392 2354 chrX 3151964 3151996 chrX 15780239 15780239 4 12628255 8.0 10.0 9.0 0.4 12628275 chrX 3151964 intron N + chrX 9466102 intron mgl - chrX 15780239 intergenic CG43673 +,Efhc1.1 - chrX_4_9465001 chrX_9465001 RAL-392 2355 chrX 3218492 3218534 chrX 3227661 3227703 roo 13 9167 1.0 4.5 2.8 3.4 9211 chrX 3218492 intron dnc + chrX 3223098 intron dnc + chrX 3227703 intron dnc + chrX_13_3220001 chrX_3220001 RAL-392 2356 chrX 3306330 3306375 chrX 3306432 3306477 6 98 2.5 0.5 1.5 2.4 147 chrX 3306330 intron dnc + chrX 3306404 intron dnc + chrX 3306477 intron dnc + chrX_6_3305001 chrX_3305001 RAL-392 2357 chrX 3373666 3373703 chrX 3374954 3374993 8 1289 11.0 19.5 15.2 0.5 1327 chrX 3373666 5` UTR,5` UTR CR44999 +,dm + chrX 3374330 intron,intron CR44999 +,dm + chrX 3374993 5` UTR,5` UTR CR44999 +,dm + chrX_8_3370001 chrX_3370001 RAL-392 2358 chrX 3398128 3398379 chrX 3398223 3398477 20 97 3.5 12.0 7.8 2.3 349 chrX 3398128 intron,intron CR44999 +,CG12535 - chrX 3398302 intron,intron CR44999 +,CG12535 - chrX 3398477 intron,intron CR44999 +,CG12535 - chrX_20_3395001 chrX_3395001 RAL-392 2359 chrX 3409007 3409014 chrX 3409090 3409111 6 94 0.0 5.5 2.8 1.6 104 chrX 3409007 intron,intron CR44999 +,CG12535 - chrX 3409059 intron,intron CR44999 +,CG12535 - chrX 3409111 intron,intron CR44999 +,CG12535 - chrX_6_3405001 chrX_3405001 RAL-392 2360 chrX 3493078 3493124 chrX 3502256 3502278 roo 5 9162 3.5 2.0 2.8 1.3 9200 chrX 3493078 intron,intron CR44999 +,Gas8 - chrX 3497678 intron,intron CR44999 +,Gas8 - chrX 3502278 intron,intron CR44999 +,Gas8 - chrX_5_3495001 chrX_3495001 RAL-392 2361 chrX 3597092 3597127 chrX 3597200 3597235 8 107 2.0 5.0 3.5 1.8 143 chrX 3597092 intron AstA-R1 + chrX 3597164 intron AstA-R1 + chrX 3597235 intron AstA-R1 + chrX_8_3595001 chrX_3595001 RAL-392 2362 chrX 3597545 3597548 chrX 3619718 3619736 roo 5 22184 8.5 1.5 5.0 0.8 22191 chrX 3597545 intron AstA-R1 + chrX 3608640 intron AstA-R1 + chrX 3619736 intron AstA-R1 + chrX_5_3605001 chrX_3605001 RAL-392 2363 chrX 3597555 3597584 chrX 3619717 3619717 roo 9 22168 2.0 1.5 1.8 3.2 22162 chrX 3597555 intron AstA-R1 + chrX 3608636 intron AstA-R1 + chrX 3619717 intron AstA-R1 + chrX_9_3605001 chrX_3605001 RAL-392 2364 chrX 3629833 3629884 chrX 3629938 3629989 14 101 3.5 4.0 3.8 2.9 156 chrX 3629833 intron AstA-R1 + chrX 3629911 intron AstA-R1 + chrX 3629989 intron AstA-R1 + chrX_14_3625001 chrX_3625001 RAL-392 2365 chrX 3630558 3630563 chrX 3630623 3630653 4 78 2.5 3.5 3.0 1.0 95 chrX 3630558 intron AstA-R1 + chrX 3630606 intron AstA-R1 + chrX 3630653 intron AstA-R1 + chrX_4_3630001 chrX_3630001 RAL-392 2366 chrX 3691033 3691068 chrX 3691185 3691229 4 159 4.5 2.5 3.5 0.9 196 chrX 3691033 intron Mnt + chrX 3691131 intron Mnt + chrX 3691229 intron Mnt + chrX_4_3690001 chrX_3690001 RAL-392 2367 chrX 3713087 3713117 chrX 3713211 3713246 6 124 7.5 4.0 5.8 0.9 159 chrX 3713087 intron Rala - chrX 3713166 intron Rala - chrX 3713246 intron Rala - chrX_6_3710001 chrX_3710001 RAL-392 2368 chrX 3713119 3713136 chrX 3713208 3713265 6 120 4.5 3.5 4.0 1.2 146 chrX 3713119 intron Rala - chrX 3713192 intron Rala - chrX 3713265 intron Rala - chrX_6_3710001 chrX_3710001 RAL-392 2369 chrX 3842331 3842352 chrX 3842569 3842587 pogo 4 235 1.5 1.0 1.2 1.8 256 chrX 3842331 intron ec + chrX 3842459 intron ec + chrX 3842587 intron ec + chrX_4_3840001 chrX_3840001 RAL-392 2370 chrX 3862805 3862837 chrX 3862909 3862941 8 102 5.5 4.0 4.8 1.4 136 chrX 3862805 intergenic yin - chrX 3862873 intergenic yin - chrX 3862941 intergenic yin - chrX_8_3860001 chrX_3860001 RAL-392 2371 chrX 3866084 3866135 chrX 3866182 3866228 12 92 3.5 4.0 3.8 2.5 144 chrX 3866084 intron yin - chrX 3866156 intron yin - chrX 3866228 intron yin - chrX_12_3865001 chrX_3865001 RAL-392 2372 chrX 3986847 3986883 chrX 3994500 3994536 412 5 7646 2.0 0.5 1.2 2.3 7689 chrX 3986847 intergenic not near genes chrX 3990692 intergenic not near genes chrX 3994536 intergenic not near genes chrX_5_3990001 chrX_3990001 RAL-392 2373 chrX 4048479 4048514 chrX 4048575 4048608 11 95 4.5 1.5 3.0 2.8 129 chrX 4048479 3` UTR CR45482 - chrX 4048544 3` UTR CR45482 - chrX 4048608 3` UTR CR45482 - chrX_11_4045001 chrX_4045001 RAL-392 2374 chrX 4132669 4132696 chrX 4132843 4132873 9 175 2.5 2.5 2.5 2.6 204 chrX 4132669 3` UTR GlcAT-I + chrX 4132771 3` UTR GlcAT-I + chrX 4132873 intergenic Fas2 -,GlcAT-I + chrX_9_4130001 chrX_4130001 RAL-392 2375 chrX 4157876 4157917 chrX 4164949 4164987 297 8 7070 6.5 4.0 5.2 1.3 7111 chrX 4157876 intron Fas2 - chrX 4161432 intron Fas2 - chrX 4164987 intron Fas2 - chrX_8_4160001 chrX_4160001 RAL-392 2376 chrX 4247960 4247980 chrX 4248303 4248310 7 344 4.0 6.0 5.0 1.2 350 chrX 4247960 intergenic CG43134 +,CG43135 + chrX 4248135 intergenic CG43135 +,CG43134 + chrX 4248310 intergenic CG43135 + chrX_7_4245001 chrX_4245001 RAL-392 2377 chrX 4383669 4383692 chrX 4384632 4384668 6 970 0.0 0.0 0.0 6.0 999 chrX 4383669 intergenic not near genes chrX 4384168 intergenic not near genes chrX 4384668 intergenic not near genes chrX_6_4380001 chrX_4380001 RAL-392 2378 chrX 4409134 4409157 chrX 4409229 4409238 8 97 6.0 9.0 7.5 0.9 104 chrX 4409134 intron CR32773 - chrX 4409186 intron CR32773 - chrX 4409238 intron CR32773 - chrX_8_4405001 chrX_4405001 RAL-392 2379 chrX 4525734 4525771 chrX 4525846 4525883 11 111 3.5 2.0 2.8 2.9 149 chrX 4525734 intron CR32773 - chrX 4525808 intron CR32773 - chrX 4525883 intron CR32773 - chrX_11_4525001 chrX_4525001 RAL-392 2380 chrX 4598191 4598203 chrX 4598256 4598298 4 90 0.0 0.0 0.0 4.0 107 chrX 4598191 intron CR32773 - chrX 4598244 intron CR32773 - chrX 4598298 intron CR32773 - chrX_4_4595001 chrX_4595001 RAL-392 2381 chrX 4638626 4638664 chrX 4638783 4638814 6 147 3.0 4.0 3.5 1.3 188 chrX 4638626 exon pon + chrX 4638720 3` UTR pon + chrX 4638814 3` UTR pon + chrX_6_4635001 chrX_4635001 RAL-392 2382 chrX 4700372 4700414 chrX 4700734 4700777 jockey 7 360 5.0 3.5 4.2 1.3 405 chrX 4700372 3` UTR ctp + chrX 4700574 3` UTR ctp + chrX 4700777 3` UTR ctp + chrX_7_4700001 chrX_4700001 RAL-392 2383 chrX 4723571 4723583 chrX 4723657 4723660 5 89 3.5 6.0 4.8 0.9 89 chrX 4723571 intron Proc-R + chrX 4723616 intron Proc-R + chrX 4723660 intron Proc-R + chrX_5_4720001 chrX_4720001 RAL-392 2384 chrX 4731825 4731834 chrX 4736907 4736907 jockey 4 5080 3.5 6.5 5.0 0.7 5082 chrX 4731825 intergenic not near genes chrX 4734366 intergenic not near genes chrX 4736907 intergenic not near genes chrX_4_4730001 chrX_4730001 RAL-392 2385 chrX 4757362 4757408 chrX 4757461 4757499 13 91 2.5 2.0 2.2 4.1 137 chrX 4757362 intergenic not near genes chrX 4757430 intergenic not near genes chrX 4757499 intergenic not near genes chrX_13_4755001 chrX_4755001 RAL-392 2386 chrX 4763249 4763271 chrX 4763739 4763764 Stalker4 4 497 4.0 3.5 3.8 0.8 515 chrX 4763249 intergenic not near genes chrX 4763506 intergenic not near genes chrX 4763764 intergenic not near genes chrX_4_4760001 chrX_4760001 RAL-392 2387 chrX 4827965 4827993 chrX 4835344 4835350 Stalker4 6 7376 3.0 4.0 3.5 1.3 7385 chrX 4827965 intergenic not near genes chrX 4831658 intergenic not near genes chrX 4835350 intergenic not near genes chrX_6_4830001 chrX_4830001 RAL-392 2388 chrX 4986059 4986096 chrX 4986652 4986652 6 581 5.5 3.5 4.5 1.1 593 chrX 4986059 intron CR44833 - chrX 4986356 intron CR44833 - chrX 4986652 intron CR44833 - chrX_6_4985001 chrX_4985001 RAL-392 2389 chrX 5096263 5096304 chrX 5103838 5103889 springer 11 7578 1.0 2.5 1.8 3.9 7626 chrX 5096263 intron,intron CG15465 +,rg + chrX 5100076 intron,intron CG15465 +,rg + chrX 5103889 intron,intron CG15465 +,rg + chrX_11_5100001 chrX_5100001 RAL-392 2390 chrX 5134794 5134827 chrX 5134896 5134948 16 118 7.5 4.0 5.8 2.4 154 chrX 5134794 intron,intron CG15465 +,rg + chrX 5134871 intron,intron CG15465 +,rg + chrX 5134948 intron,intron CG15465 +,rg + chrX_16_5130001 chrX_5130001 RAL-392 2391 chrX 5277542 5277546 chrX 5277735 5277736 4 192 7.5 8.5 8.0 0.4 194 chrX 5277542 intergenic not near genes chrX 5277639 intergenic not near genes chrX 5277736 intergenic not near genes chrX_4_5275001 chrX_5275001 RAL-392 2392 chrX 5277556 5277584 chrX 5277731 5277777 6 187 2.0 6.5 4.2 1.2 221 chrX 5277556 intergenic not near genes chrX 5277666 intergenic not near genes chrX 5277777 intergenic not near genes chrX_6_5275001 chrX_5275001 RAL-392 2393 chrX 5345375 5345429 chrX 5345506 5345560 4 120 0.0 4.0 2.0 1.3 185 chrX 5345375 intron SK + chrX 5345468 intron SK + chrX 5345560 intron SK + chrX_4_5345001 chrX_5345001 RAL-392 2394 chrX 5473567 5473615 chrX 5473663 5473683 10 88 4.0 3.0 3.5 2.2 116 chrX 5473567 intron SPR + chrX 5473625 intron SPR + chrX 5473683 intron SPR + chrX_10_5470001 chrX_5470001 RAL-392 2395 chrX 5501472 5501511 chrX 5501582 5501611 9 107 5.5 3.0 4.2 1.7 139 chrX 5501472 intergenic CG4151 +,CG32762 - chrX 5501542 5` UTR CG4151 + chrX 5501611 5` UTR CG4151 + chrX_9_5500001 chrX_5500001 RAL-392 2396 chrX 5524830 5524853 chrX 5528703 5528721 412 6 3878 5.5 3.5 4.5 1.1 3891 chrX 5524830 intergenic snoRNA:Psi28S-3342 - chrX 5526776 intergenic not near genes chrX 5528721 intergenic Vsx2 - chrX_6_5525001 chrX_5525001 RAL-392 2397 chrX 5883795 5883841 chrX 5884056 5884102 pogo 4 256 1.5 4.0 2.8 1.1 307 chrX 5883795 intron CR45668 - chrX 5883948 intron CR45668 - chrX 5884102 intron CR45668 - chrX_4_5880001 chrX_5880001 RAL-392 2398 chrX 5884151 5884191 chrX 5884412 5884452 pogo 10 254 1.5 8.0 4.8 1.7 301 chrX 5884151 intron CR45668 - chrX 5884302 intron CR45668 - chrX 5884452 intron CR45668 - chrX_10_5880001 chrX_5880001 RAL-392 2399 chrX 6003294 6003311 chrX 6003375 6003412 6 94 0.5 6.0 3.2 1.4 118 chrX 6003294 intron CR44498 + chrX 6003353 intron CR44498 + chrX 6003412 intron CR44498 + chrX_6_6000001 chrX_6000001 RAL-392 2400 chrX 6118683 6118730 chrX 6118779 6118829 13 100 3.5 4.5 4.0 2.6 146 chrX 6118683 intron Ca-alpha1T - chrX 6118756 intron Ca-alpha1T - chrX 6118829 intron Ca-alpha1T - chrX_13_6115001 chrX_6115001 RAL-392 2401 chrX 6171568 6171578 chrX 6179018 6179030 Quasimodo 5 7451 5.0 3.0 4.0 1.0 7462 chrX 6171568 intron Ca-alpha1T - chrX 6175299 intron Ca-alpha1T - chrX 6179030 intron Ca-alpha1T - chrX_5_6175001 chrX_6175001 RAL-392 2402 chrX 6171580 6171611 chrX 6179014 6179064 Quasimodo 13 7446 3.0 3.0 3.0 3.2 7484 chrX 6171580 intron Ca-alpha1T - chrX 6175322 intron Ca-alpha1T - chrX 6179064 intron Ca-alpha1T - chrX_13_6175001 chrX_6175001 RAL-392 2403 chrX 6215515 6215531 chrX 6215616 6215623 5 97 4.0 6.5 5.2 0.8 108 chrX 6215515 intergenic not near genes chrX 6215569 intergenic not near genes chrX 6215623 intergenic not near genes chrX_5_6215001 chrX_6215001 RAL-392 2404 chrX 6306541 6306572 chrX 6306632 6306659 8 92 2.0 3.0 2.5 2.3 118 chrX 6306541 3` UTR CG3823 + chrX 6306600 3` UTR CG3823 + chrX 6306659 3` UTR CG3823 + chrX_8_6305001 chrX_6305001 RAL-392 2405 chrX 6312170 6312223 chrX 6312273 6312316 9 98 2.0 3.0 2.5 2.6 146 chrX 6312170 intron CG15894 + chrX 6312243 intron CG15894 + chrX 6312316 intron CG15894 + chrX_9_6310001 chrX_6310001 RAL-392 2406 chrX 6314406 6314448 chrX 6314500 6314544 5 89 2.0 3.5 2.8 1.3 138 chrX 6314406 intron CG15894 + chrX 6314475 intron CG15894 + chrX 6314544 intron CG15894 + chrX_5_6310001 chrX_6310001 RAL-392 2407 chrX 6320033 6320079 chrX 6320161 6320207 14 127 3.0 3.5 3.2 3.3 174 chrX 6320033 intron CG15894 + chrX 6320120 intron CG15894 + chrX 6320207 intron CG15894 + chrX_14_6320001 chrX_6320001 RAL-392 2408 chrX 6335216 6335243 chrX 6337719 6337753 Tirant 6 2512 0.0 3.0 1.5 2.4 2537 chrX 6335216 intergenic not near genes chrX 6336484 intergenic not near genes chrX 6337753 intergenic CG3842 + chrX_6_6335001 chrX_6335001 RAL-392 2409 chrX 6388647 6388694 chrX 6388743 6388790 13 95 2.5 6.0 4.2 2.5 143 chrX 6388647 intergenic not near genes chrX 6388718 intergenic not near genes chrX 6388790 intergenic not near genes chrX_13_6385001 chrX_6385001 RAL-392 2410 chrX 6392898 6392901 chrX 6397632 6397674 Doc 5 4759 1.0 2.5 1.8 1.8 4776 chrX 6392898 intergenic not near genes chrX 6395286 intergenic not near genes chrX 6397674 intergenic not near genes chrX_5_6395001 chrX_6395001 RAL-392 2411 chrX 6487970 6487981 chrX 6488061 6488083 7 97 5.0 7.5 6.2 1.0 113 chrX 6487970 intron CG42340 - chrX 6488026 intron CG42340 - chrX 6488083 intron CG42340 - chrX_7_6485001 chrX_6485001 RAL-392 2412 chrX 6591834 6591871 chrX 6591939 6591976 5 103 4.0 0.5 2.2 1.6 142 chrX 6591834 intron Pat1 + chrX 6591905 intron Pat1 + chrX 6591976 intron Pat1 + chrX_5_6590001 chrX_6590001 RAL-392 2413 chrX 6605468 6605490 chrX 6608510 6608529 Burdock 8 3041 3.5 6.0 4.8 1.4 3061 chrX 6605468 intron pigs + chrX 6606998 intron pigs + chrX 6608529 intron pigs + chrX_8_6605001 chrX_6605001 RAL-392 2414 chrX 6618452 6618474 chrX 6618549 6618559 5 90 4.5 9.0 6.8 0.6 107 chrX 6618452 intron pigs + chrX 6618506 intron pigs + chrX 6618559 intron pigs + chrX_5_6615001 chrX_6615001 RAL-392 2415 chrX 6737505 6737542 chrX 6737607 6737634 12 95 3.0 5.5 4.2 2.3 129 chrX 6737505 intron CG3168 - chrX 6737570 intron CG3168 - chrX 6737634 intron CG3168 - chrX_12_6735001 chrX_6735001 RAL-392 2416 chrX 6856726 6856754 chrX 6856830 6856843 5 106 3.5 2.5 3.0 1.2 117 chrX 6856726 intron CG14434 - chrX 6856784 intron CG14434 - chrX 6856843 intron CG14434 - chrX_5_6855001 chrX_6855001 RAL-392 2417 chrX 6897666 6897707 chrX 6897796 6897812 14 126 4.0 3.0 3.5 3.1 146 chrX 6897666 intergenic not near genes chrX 6897739 intergenic not near genes chrX 6897812 intergenic not near genes chrX_14_6895001 chrX_6895001 RAL-392 2418 chrX 6987409 6987433 chrX 6987691 6987700 4 277 5.5 9.5 7.5 0.5 291 chrX 6987409 intron ogre - chrX 6987554 intron ogre - chrX 6987700 intron ogre - chrX_4_6985001 chrX_6985001 RAL-392 2419 chrX 7023584 7023631 chrX 7030994 7031015 Tabor 7 7401 5.5 3.5 4.5 1.3 7431 chrX 7023584 intron CG12541 - chrX 7027300 intron CG12541 - chrX 7031015 intron CG12541 - chrX_7_7025001 chrX_7025001 RAL-392 2420 chrX 7047511 7047515 chrX 7047580 7047626 5 101 0.0 3.5 1.8 1.8 115 chrX 7047511 intron CG12541 - chrX 7047568 intron CG12541 - chrX 7047626 intron CG12541 - chrX_5_7045001 chrX_7045001 RAL-392 2421 chrX 7125231 7125271 chrX 7134404 7134450 roo 7 9177 3.0 3.5 3.2 1.7 9219 chrX 7125231 intergenic not near genes chrX 7129840 intergenic not near genes chrX 7134450 intergenic not near genes chrX_7_7125001 chrX_7125001 RAL-392 2422 chrX 7351510 7351541 chrX 7351589 7351604 4 72 2.0 2.5 2.2 1.2 94 chrX 7351510 intron,intron CR44357 -,CG1677 - chrX 7351557 intron,intron CR44357 -,CG1677 - chrX 7351604 intron,intron CR44357 -,CG1677 - chrX_4_7350001 chrX_7350001 RAL-392 2423 chrX 7702896 7702929 chrX 7703344 7703376 jockey 13 448 8.5 6.5 7.5 1.5 480 chrX 7702896 intron CHES-1-like - chrX 7703136 intron CHES-1-like - chrX 7703376 intron CHES-1-like - chrX_13_7700001 chrX_7700001 RAL-392 2424 chrX 7784248 7784263 chrX 7784535 7784539 jockey 4 283 1.5 3.5 2.5 1.1 291 chrX 7784248 intergenic not near genes chrX 7784394 intergenic not near genes chrX 7784539 intergenic not near genes chrX_4_7780001 chrX_7780001 RAL-392 2425 chrX 7845711 7845738 chrX 7847222 7847234 hopper2 5 1507 7.0 4.5 5.8 0.7 1523 chrX 7845711 intergenic not near genes chrX 7846472 intergenic not near genes chrX 7847234 intergenic not near genes chrX_5_7845001 chrX_7845001 RAL-392 2426 chrX 8009254 8009282 chrX 8010668 8010712 12 1424 2.0 3.5 2.8 3.2 1458 chrX 8009254 intron Tbh + chrX 8009983 intron Tbh + chrX 8010712 intron Tbh + chrX_12_8005001 chrX_8005001 RAL-392 2427 chrX 8031424 8031452 chrX 8035733 8035770 Juan 10 4325 6.0 6.0 6.0 1.4 4346 chrX 8031424 intergenic not near genes chrX 8033597 intergenic not near genes chrX 8035770 3` UTR CG2233 - chrX_10_8030001 chrX_8030001 RAL-392 2428 chrX 8066561 8066599 chrX 8066658 8066692 6 104 0.0 1.0 0.5 4.0 131 chrX 8066561 intron mys + chrX 8066626 intron mys + chrX 8066692 intron mys + chrX_6_8065001 chrX_8065001 RAL-392 2429 chrX 8360679 8360719 chrX 8360790 8360830 9 110 2.5 1.0 1.8 3.2 151 chrX 8360679 intron nAChRalpha3 - chrX 8360754 intron nAChRalpha3 - chrX 8360830 intron nAChRalpha3 - chrX_9_8360001 chrX_8360001 RAL-392 2430 chrX 8364835 8364881 chrX 8365252 8365260 BS 13 410 6.5 3.5 5.0 2.2 425 chrX 8364835 intron nAChRalpha3 - chrX 8365048 intron nAChRalpha3 - chrX 8365260 intron nAChRalpha3 - chrX_13_8365001 chrX_8365001 RAL-392 2431 chrX 8506022 8506063 chrX 8506105 8506158 8 92 2.0 2.0 2.0 2.7 136 chrX 8506022 intron CG33181 + chrX 8506090 intron CG33181 + chrX 8506158 intron CG33181 + chrX_8_8505001 chrX_8505001 RAL-392 2432 chrX 8506508 8506548 chrX 8506736 8506754 6 224 2.5 1.5 2.0 2.0 246 chrX 8506508 intron CG33181 + chrX 8506631 intron CG33181 + chrX 8506754 intron CG33181 + chrX_6_8505001 chrX_8505001 RAL-392 2433 chrX 8544129 8544164 chrX 8544228 8544263 7 97 4.0 6.5 5.2 1.1 134 chrX 8544129 intron Nrg + chrX 8544196 intron Nrg + chrX 8544263 intron Nrg + chrX_7_8540001 chrX_8540001 RAL-392 2434 chrX 8727382 8727426 chrX 8727479 8727523 5 97 1.0 2.5 1.8 1.8 141 chrX 8727382 intergenic not near genes chrX 8727452 intergenic not near genes chrX 8727523 intergenic not near genes chrX_5_8725001 chrX_8725001 RAL-392 2435 chrX 8772229 8772250 chrX 8772328 8772349 5 95 4.0 4.5 4.2 1.0 120 chrX 8772229 intron Lim1 - chrX 8772289 intron Lim1 - chrX 8772349 intron Lim1 - chrX_5_8770001 chrX_8770001 RAL-392 2436 chrX 8860785 8860798 chrX 8860858 8860901 4 94 0.0 3.0 1.5 1.6 116 chrX 8860785 intron CG12075 + chrX 8860843 intron CG12075 + chrX 8860901 intron CG12075 + chrX_4_8860001 chrX_8860001 RAL-392 2437 chrX 8879017 8879061 chrX 8879232 8879263 4 211 4.5 0.5 2.5 1.1 246 chrX 8879017 intron Moe - chrX 8879140 intron Moe - chrX 8879263 intron Moe - chrX_4_8875001 chrX_8875001 RAL-392 2438 chrX 8894978 8895000 chrX 8895084 8895106 10 104 3.5 1.5 2.5 2.9 128 chrX 8894978 intron Moe - chrX 8895042 intron Moe - chrX 8895106 intron Moe - chrX_10_8895001 chrX_8895001 RAL-392 2439 chrX 8922313 8922333 chrX 8922762 8922762 jockey 7 446 7.0 2.5 4.8 1.2 449 chrX 8922313 intron rdgA + chrX 8922538 intron rdgA + chrX 8922762 intron rdgA + chrX_7_8920001 chrX_8920001 RAL-392 2440 chrX 8922336 8922358 chrX 8922760 8922812 jockey 9 430 4.0 2.5 3.2 2.1 476 chrX 8922336 intron rdgA + chrX 8922574 intron rdgA + chrX 8922812 intron rdgA + chrX_9_8920001 chrX_8920001 RAL-392 2441 chrX 8948746 8948789 chrX 8956276 8956319 roo 6 7524 4.5 4.5 4.5 1.1 7573 chrX 8948746 intron rdgA + chrX 8952532 intron rdgA + chrX 8956319 intron rdgA + chrX_6_8950001 chrX_8950001 RAL-392 2442 chrX 8992661 8992684 chrX 8992752 8992758 5 92 2.5 4.0 3.2 1.2 97 chrX 8992661 intron,intron rdgA +,CR43836 - chrX 8992710 intron,intron rdgA +,CR43836 - chrX 8992758 intron,intron rdgA +,CR43836 - chrX_5_8990001 chrX_8990001 RAL-392 2443 chrX 9041988 9042021 chrX 9042110 9042150 9 121 0.0 4.5 2.2 2.8 162 chrX 9041988 intron,intron CR43836 -,CG42388 + chrX 9042069 intron,intron CR43836 -,CG42388 + chrX 9042150 intron,intron CR43836 -,CG42388 + chrX_9_9040001 chrX_9040001 RAL-392 2444 chrX 9062706 9062753 chrX 9062803 9062815 8 91 0.5 0.5 0.5 5.3 109 chrX 9062706 intron CG15365 - chrX 9062760 intron CG15365 - chrX 9062815 intron CG15365 - chrX_8_9060001 chrX_9060001 RAL-392 2445 chrX 9129464 9129501 chrX 9129568 9129594 10 99 3.5 3.5 3.5 2.2 130 chrX 9129464 intron fend - chrX 9129529 intron fend - chrX 9129594 intron fend - chrX_10_9125001 chrX_9125001 RAL-392 2446 chrX 9218058 9218081 chrX 9218169 9218192 11 110 11.5 2.0 6.8 1.4 134 chrX 9218058 3` UTR t - chrX 9218125 3` UTR t - chrX 9218192 3` UTR t - chrX_11_9215001 chrX_9215001 RAL-392 2447 chrX 9337920 9337973 chrX 9338032 9338045 8 90 3.0 3.0 3.0 2.0 125 chrX 9337920 intron CG34449 - chrX 9337982 intron CG34449 - chrX 9338045 intron CG34449 - chrX_8_9335001 chrX_9335001 RAL-392 2448 chrX 9464300 9464316 chrX 9464373 9464419 8 91 2.5 2.5 2.5 2.3 119 chrX 9464300 intron mgl - chrX 9464360 intron mgl - chrX 9464419 intron mgl - chrX_8_9460001 chrX_9460001 RAL-392 2449 chrX 9508129 9508159 chrX 9509657 9509696 jockey 9 1535 7.0 3.5 5.2 1.5 1567 chrX 9508129 intron CG32700 - chrX 9508912 intron CG32700 - chrX 9509696 intron CG32700 - chrX_9_9505001 chrX_9505001 RAL-392 2450 chrX 9537092 9537136 chrX 9537364 9537407 4 273 3.5 7.5 5.5 0.6 315 chrX 9537092 intron CG32700 - chrX 9537250 intron CG32700 - chrX 9537407 intron CG32700 - chrX_4_9535001 chrX_9535001 RAL-392 2451 chrX 9575785 9575814 chrX 9576129 9576152 mdg3 7 335 7.0 7.0 7.0 0.9 367 chrX 9575785 intron,exon CG32699 -,CG42395 - chrX 9575968 intron,intron CG32699 -,CG42395 - chrX 9576152 intron,5` UTR CG32699 -,CG42395 - chrX_7_9575001 chrX_9575001 RAL-392 2452 chrX 9575815 9575817 chrX 9576114 9576160 mdg3 4 322 5.5 4.5 5.0 0.7 345 chrX 9575815 intron,exon CG32699 -,CG42395 - chrX 9575988 intron,intron CG32699 -,CG42395 - chrX 9576160 intron,5` UTR CG32699 -,CG42395 - chrX_4_9575001 chrX_9575001 RAL-392 2453 chrX 9791843 9791879 chrX 9791960 9791996 7 113 6.0 4.5 5.2 1.1 153 chrX 9791843 intron CG32698 + chrX 9791920 intron CG32698 + chrX 9791996 intron CG32698 + chrX_7_9790001 chrX_9790001 RAL-392 2454 chrX 9854465 9854475 chrX 9854552 9854571 4 96 5.0 3.0 4.0 0.8 106 chrX 9854465 intergenic not near genes chrX 9854518 intergenic not near genes chrX 9854571 intergenic not near genes chrX_4_9850001 chrX_9850001 RAL-392 2455 chrX 9854479 9854489 chrX 9854549 9854590 7 96 1.5 2.5 2.0 2.3 111 chrX 9854479 intergenic not near genes chrX 9854534 intergenic not near genes chrX 9854590 intergenic not near genes chrX_7_9850001 chrX_9850001 RAL-392 2456 chrX 9923376 9923400 chrX 9923487 9923511 4 109 7.5 4.5 6.0 0.6 135 chrX 9923376 intergenic not near genes chrX 9923444 intergenic not near genes chrX 9923511 intergenic not near genes chrX_4_9920001 chrX_9920001 RAL-392 2457 chrX 9923405 9923423 chrX 9923481 9923534 15 96 3.0 3.5 3.2 3.6 129 chrX 9923405 intergenic not near genes chrX 9923470 intergenic not near genes chrX 9923534 intergenic not near genes chrX_15_9920001 chrX_9920001 RAL-392 2458 chrX 10138206 10138243 chrX 10145719 10145762 412 16 7520 6.0 5.0 5.5 2.5 7556 chrX 10138206 intron,intron RhoU +,CR44894 - chrX 10141984 intron,intron RhoU +,CR44894 - chrX 10145762 intron,intron RhoU +,CR44894 - chrX_16_10140001 chrX_10140001 RAL-392 2459 chrX 10154266 10154310 chrX 10154362 10154381 6 90 6.5 2.0 4.2 1.2 115 chrX 10154266 intron,intron CR44894 -,CG12645 + chrX 10154324 intron,intron CR44894 -,CG12645 + chrX 10154381 intron,intron CR44894 -,CG12645 + chrX_6_10150001 chrX_10150001 RAL-392 2460 chrX 10267299 10267331 chrX 10276469 10276501 roo 4 9170 1.0 4.0 2.5 1.1 9202 chrX 10267299 3` UTR alpha-Man-I - chrX 10271900 intron alpha-Man-I - chrX 10276501 3` UTR alpha-Man-I - chrX_4_10270001 chrX_10270001 RAL-392 2461 chrX 10314455 10314468 chrX 10314531 10314552 6 87 11.0 6.0 8.5 0.6 97 chrX 10314455 intron alpha-Man-I - chrX 10314504 intron alpha-Man-I - chrX 10314552 intron alpha-Man-I - chrX_6_10310001 chrX_10310001 RAL-392 2462 chrX 10317534 10317572 chrX 10317632 10317649 7 94 1.0 1.0 1.0 3.5 115 chrX 10317534 intron alpha-Man-I - chrX 10317592 intron alpha-Man-I - chrX 10317649 intron alpha-Man-I - chrX_7_10315001 chrX_10315001 RAL-392 2463 chrX 10348781 10348825 chrX 10356366 10356396 springer 9 7575 2.0 0.5 1.2 4.1 7615 chrX 10348781 intergenic snoRNA:U3:9B + chrX 10352588 intergenic not near genes chrX 10356396 intergenic l(1)G0289 - chrX_9_10350001 chrX_10350001 RAL-392 2464 chrX 10385184 10385216 chrX 10385266 10385280 5 84 0.5 6.5 3.5 1.1 96 chrX 10385184 5` UTR Psf3 - chrX 10385232 5` UTR Psf3 - chrX 10385280 5` UTR Psf3 - chrX_5_10385001 chrX_10385001 RAL-392 2465 chrX 10550323 10550367 chrX 10550413 10550465 20 97 3.0 3.0 3.0 5.0 142 chrX 10550323 intron spri - chrX 10550394 intron spri - chrX 10550465 intron spri - chrX_20_10550001 chrX_10550001 RAL-392 2466 chrX 10550861 10550886 chrX 10552334 10552363 hobo 4 1476 1.0 2.0 1.5 1.6 1502 chrX 10550861 intron spri - chrX 10551612 intron spri - chrX 10552363 intron spri - chrX_4_10550001 chrX_10550001 RAL-392 2467 chrX 10590779 10590810 chrX 10590863 10590906 11 93 4.0 2.5 3.2 2.6 127 chrX 10590779 intergenic Hmr - chrX 10590842 intergenic Hmr - chrX 10590906 intergenic Hmr - chrX_11_10590001 chrX_10590001 RAL-392 2468 chrX 10609368 10609372 chrX 10609476 10609497 5 117 19.5 23.5 21.5 0.2 129 chrX 10609368 intron CG43347 - chrX 10609432 intron CG43347 - chrX 10609497 intron CG43347 - chrX_5_10605001 chrX_10605001 RAL-392 2469 chrX 10651610 10651642 chrX 10651746 10651758 10 130 4.5 6.0 5.2 1.6 148 chrX 10651610 intron X11Lbeta + chrX 10651684 intron X11Lbeta + chrX 10651758 intron X11Lbeta + chrX_10_10650001 chrX_10650001 RAL-392 2470 chrX 10686042 10686082 chrX 10691193 10691239 roo 8 5155 2.0 4.0 3.0 2.0 5197 chrX 10686042 intron X11Lbeta + chrX 10688640 intron X11Lbeta + chrX 10691239 intron X11Lbeta + chrX_8_10685001 chrX_10685001 RAL-392 2471 chrX 10933908 10933942 chrX 10934016 10934050 10 105 0.0 5.5 2.8 2.6 142 chrX 10933908 intron Myo10A + chrX 10933979 intron Myo10A + chrX 10934050 intron Myo10A + chrX_10_10930001 chrX_10930001 RAL-392 2472 chrX 11069138 11069186 chrX 11069301 11069344 10 155 5.0 4.0 4.5 1.8 206 chrX 11069138 intergenic not near genes chrX 11069241 intergenic not near genes chrX 11069344 intergenic not near genes chrX_10_11065001 chrX_11065001 RAL-392 2473 chrX 11095985 11096020 chrX 11103101 11103137 HMS-Beagle 12 7118 5.0 6.0 5.5 1.8 7152 chrX 11095985 intergenic not near genes chrX 11099561 intergenic not near genes chrX 11103137 intron CG42249 + chrX_12_11095001 chrX_11095001 RAL-392 2474 chrX 11184235 11184284 chrX 11189331 11189360 flea 7 5084 2.5 0.5 1.5 2.8 5125 chrX 11184235 intergenic not near genes chrX 11186798 intergenic not near genes chrX 11189360 intergenic not near genes chrX_7_11185001 chrX_11185001 RAL-392 2475 chrX 11627844 11627856 chrX 11627928 11627967 7 98 6.5 5.0 5.8 1.0 123 chrX 11627844 intron Ptp10D + chrX 11627906 intron Ptp10D + chrX 11627967 intron Ptp10D + chrX_7_11625001 chrX_11625001 RAL-392 2476 chrX 11633407 11633446 chrX 11640474 11640520 297 18 7071 6.0 5.0 5.5 2.8 7113 chrX 11633407 intron Ptp10D + chrX 11636964 intron Ptp10D + chrX 11640520 intron Ptp10D + chrX_18_11635001 chrX_11635001 RAL-392 2477 chrX 11719852 11719891 chrX 11719952 11719980 14 94 1.5 2.0 1.8 5.0 128 chrX 11719852 3` UTR prtp + chrX 11719916 intergenic prtp +,Tango10 + chrX 11719980 intergenic prtp +,Tango10 + chrX_14_11715001 chrX_11715001 RAL-392 2478 chrX 11799006 11799037 chrX 11799102 11799143 7 100 3.0 4.0 3.5 1.6 137 chrX 11799006 intron CkIIbeta + chrX 11799074 intron CkIIbeta + chrX 11799143 intron CkIIbeta + chrX_7_11795001 chrX_11795001 RAL-392 2479 chrX 11804653 11804690 chrX 11804777 11804810 7 122 2.0 1.0 1.5 2.8 157 chrX 11804653 intron Hsc70-3 - chrX 11804732 intron Hsc70-3 - chrX 11804810 intron Hsc70-3 - chrX_7_11800001 chrX_11800001 RAL-392 2480 chrX 11837989 11838037 chrX 11841777 11841825 7 3790 19.0 24.0 21.5 0.3 3836 chrX 11837989 exon,5` UTR CG15741 -,CR43908 + chrX 11839907 exon Cyp28c1 + chrX 11841825 intergenic Cyp28c1 + chrX_7_11835001 chrX_11835001 RAL-392 2481 chrX 11848764 11848785 chrX 11848864 11848885 9 98 0.0 0.5 0.2 7.5 121 chrX 11848764 intergenic not near genes chrX 11848824 intergenic not near genes chrX 11848885 intergenic not near genes chrX_9_11845001 chrX_11845001 RAL-392 2482 chrX 11922347 11922383 chrX 11922500 11922536 17 148 2.0 7.5 4.8 2.9 189 chrX 11922347 exon Sclp - chrX 11922442 intron Sclp - chrX 11922536 intron Sclp - chrX_17_11920001 chrX_11920001 RAL-392 2483 chrX 11936550 11936589 chrX 11936669 11936698 6 117 0.0 4.0 2.0 2.0 148 chrX 11936550 intron cac - chrX 11936624 intron cac - chrX 11936698 exon cac - chrX_6_11935001 chrX_11935001 RAL-392 2484 chrX 11956236 11956275 chrX 11956395 11956422 11 153 1.5 5.0 3.2 2.6 186 chrX 11956236 intron cac - chrX 11956329 intron cac - chrX 11956422 intron cac - chrX_11_11955001 chrX_11955001 RAL-392 2485 chrX 12038072 12038089 chrX 12038286 12038302 5 214 10.0 6.5 8.2 0.5 230 chrX 12038072 intergenic not near genes chrX 12038187 intergenic not near genes chrX 12038302 intergenic not near genes chrX_5_12035001 chrX_12035001 RAL-392 2486 chrX 12038090 12038117 chrX 12038281 12038325 15 208 4.0 6.0 5.0 2.5 235 chrX 12038090 intergenic not near genes chrX 12038208 intergenic not near genes chrX 12038325 intergenic not near genes chrX_15_12035001 chrX_12035001 RAL-392 2487 chrX 12041159 12041203 chrX 12041616 12041646 7 440 1.0 6.5 3.8 1.5 487 chrX 12041159 intergenic not near genes chrX 12041402 intergenic not near genes chrX 12041646 intergenic not near genes chrX_7_12040001 chrX_12040001 RAL-392 2488 chrX 12350775 12350805 chrX 12350866 12350887 4 91 4.5 2.0 3.2 1.0 112 chrX 12350775 intergenic not near genes chrX 12350831 intergenic not near genes chrX 12350887 intergenic not near genes chrX_4_12350001 chrX_12350001 RAL-392 2489 chrX 12386230 12386257 chrX 12386318 12386349 4 97 0.5 1.5 1.0 2.0 119 chrX 12386230 intergenic not near genes chrX 12386290 intergenic not near genes chrX 12386349 intergenic not near genes chrX_4_12385001 chrX_12385001 RAL-392 2490 chrX 12442070 12442112 chrX 12442172 12442209 7 101 6.0 6.5 6.2 1.0 139 chrX 12442070 intron Pkcdelta + chrX 12442140 intron Pkcdelta + chrX 12442209 intron Pkcdelta + chrX_7_12440001 chrX_12440001 RAL-392 2491 chrX 12528855 12528865 chrX 12528951 12528960 4 96 8.0 1.0 4.5 0.7 105 chrX 12528855 intron CG43921 - chrX 12528908 intron CG43921 - chrX 12528960 intron CG43921 - chrX_4_12525001 chrX_12525001 RAL-392 2492 chrX 12532625 12532665 chrX 12532791 12532795 5 153 4.5 0.0 2.2 1.6 170 chrX 12532625 intron CG43921 - chrX 12532710 intron CG43921 - chrX 12532795 intron CG43921 - chrX_5_12530001 chrX_12530001 RAL-392 2493 chrX 12533769 12533823 chrX 12533866 12533914 4 95 0.0 0.5 0.2 3.3 145 chrX 12533769 intron CG43921 - chrX 12533842 intron CG43921 - chrX 12533914 intron CG43921 - chrX_4_12530001 chrX_12530001 RAL-392 2494 chrX 9845361 9845361 chrX 12546496 12546496 gypsy5 4 2701135 12.5 19.0 15.8 0.2 2701135 chrX 9845361 intron CG32698 + chrX 11195928 intergenic not near genes chrX 12546496 intron CG43921 - chrX_4_11195001 chrX_11195001 RAL-392 2495 chrX 12557455 12557479 chrX 12557550 12557580 6 96 2.0 0.0 1.0 3.0 125 chrX 12557455 intron CG43921 - chrX 12557518 intron CG43921 - chrX 12557580 intron CG43921 - chrX_6_12555001 chrX_12555001 RAL-392 2496 chrX 12930576 12930610 chrX 12937712 12937736 HMS-Beagle 11 7133 7.0 14.5 10.8 0.9 7160 chrX 12930576 intron fne + chrX 12934156 intron fne + chrX 12937736 intron fne + chrX_11_12930001 chrX_12930001 RAL-392 2497 chrX 11109417 11109417 chrX 12946233 12946233 4 1836816 16.5 22.5 19.5 0.2 1836816 chrX 11109417 intron Hsp60 + chrX 12027825 exon Usp7 - chrX 12946233 3` UTR fne + chrX_4_12025001 chrX_12025001 RAL-392 2498 chrX 13146576 13146630 chrX 13146684 13146738 11 104 6.0 2.0 4.0 2.2 162 chrX 13146576 intron CG32645 + chrX 13146657 intron CG32645 + chrX 13146738 intron CG32645 + chrX_11_13145001 chrX_13145001 RAL-392 2499 chrX 13168053 13168063 chrX 13958414 13958414 4 790356 4.0 10.5 7.2 0.5 790361 chrX 13168053 intron CG34411 - chrX 13563234 3` UTR CG32633 + chrX 13958414 intron mamo - chrX_4_13560001 chrX_13560001 RAL-392 2500 chrX 13168550 13168572 chrX 13168671 13168681 4 114 1.5 2.5 2.0 1.3 131 chrX 13168550 intron CG34411 - chrX 13168616 intron CG34411 - chrX 13168681 intron CG34411 - chrX_4_13165001 chrX_13165001 RAL-392 2501 chrX 13172374 13172383 chrX 13172435 13172437 5 76 4.0 5.0 4.5 0.9 63 chrX 13172374 exon CG34411 - chrX 13172406 intron CG34411 - chrX 13172437 intron CG34411 - chrX_5_13170001 chrX_13170001 RAL-392 2502 chrX 13277164 13277191 chrX 13277379 13277399 10 210 3.5 1.0 2.2 3.1 235 chrX 13277164 intron HDAC4 - chrX 13277282 intron HDAC4 - chrX 13277399 intron HDAC4 - chrX_10_13275001 chrX_13275001 RAL-392 2503 chrX 13277192 13277205 chrX 13277377 13277388 9 198 2.0 0.5 1.2 4.1 196 chrX 13277192 intron HDAC4 - chrX 13277290 intron HDAC4 - chrX 13277388 intron HDAC4 - chrX_9_13275001 chrX_13275001 RAL-392 2504 chrX 13358640 13358643 chrX 13358737 13358740 5 97 0.0 5.0 2.5 1.4 100 chrX 13358640 intergenic not near genes chrX 13358690 intergenic not near genes chrX 13358740 intergenic not near genes chrX_5_13355001 chrX_13355001 RAL-392 2505 chrX 13401468 13401516 chrX 13401837 13401888 jockey 9 371 0.5 2.0 1.2 4.1 420 chrX 13401468 intergenic CG1673 +,CG12725 - chrX 13401678 intergenic CG12725 -,CG1673 + chrX 13401888 3` UTR CG12725 - chrX_9_13400001 chrX_13400001 RAL-392 2506 chrX 13429471 13429494 chrX 13430630 13430652 jockey 6 1160 0.5 6.0 3.2 1.4 1181 chrX 13429471 intergenic not near genes chrX 13430062 intergenic not near genes chrX 13430652 intergenic not near genes chrX_6_13430001 chrX_13430001 RAL-392 2507 chrX 13463625 13463637 chrX 13469222 13469229 mdg3 5 5596 6.5 4.5 5.5 0.8 5604 chrX 13463625 intron Neto + chrX 13466427 intron Neto + chrX 13469229 intron Neto + chrX_5_13465001 chrX_13465001 RAL-392 2508 chrX 13463638 13463672 chrX 13469220 13469269 mdg3 13 5592 6.0 4.0 5.0 2.2 5631 chrX 13463638 intron Neto + chrX 13466454 intron Neto + chrX 13469269 intron Neto + chrX_13_13465001 chrX_13465001 RAL-392 2509 chrX 13577735 13577779 chrX 13577990 13578035 9 248 3.0 4.5 3.8 1.9 300 chrX 13577735 intron Tango13 + chrX 13577885 intron Tango13 + chrX 13578035 intron Tango13 + chrX_9_13575001 chrX_13575001 RAL-392 2510 chrX 13593222 13593223 chrX 13593301 13593323 4 95 3.0 5.0 4.0 0.8 101 chrX 13593222 3` UTR Tango13 + chrX 13593272 intergenic Tango13 +,up - chrX 13593323 intergenic Tango13 +,up - chrX_4_13590001 chrX_13590001 RAL-392 2511 chrX 13934290 13934311 chrX 13934393 13934413 6 102 1.0 3.5 2.2 1.9 123 chrX 13934290 intron mamo - chrX 13934352 intron mamo - chrX 13934413 intron mamo - chrX_6_13930001 chrX_13930001 RAL-392 2512 chrX 13057299 13057304 chrX 13966949 13966949 4 909646 26.5 5.5 16.0 0.2 909650 chrX 13057299 intron rad + chrX 13512124 intron Neto + chrX 13966949 intron mamo - chrX_4_13510001 chrX_13510001 RAL-392 2513 chrX 13975878 13975905 chrX 13975962 13975987 6 90 0.0 1.0 0.5 4.0 109 chrX 13975878 intron mamo - chrX 13975932 intron mamo - chrX 13975987 intron mamo - chrX_6_13975001 chrX_13975001 RAL-392 2514 chrX 14064138 14064171 chrX 14064255 14064270 5 105 0.0 2.5 1.2 2.3 132 chrX 14064138 intergenic not near genes chrX 14064204 intergenic not near genes chrX 14064270 intergenic not near genes chrX_5_14060001 chrX_14060001 RAL-392 2515 chrX 14157580 14157600 chrX 14163250 14163277 297 8 5676 6.5 4.5 5.5 1.2 5697 chrX 14157580 intergenic not near genes chrX 14160428 intergenic not near genes chrX 14163277 intergenic not near genes chrX_8_14160001 chrX_14160001 RAL-392 2516 chrX 14216781 14216800 chrX 14216886 14216905 6 105 0.5 2.5 1.5 2.4 124 chrX 14216781 intron l(1)G0007 + chrX 14216843 intron l(1)G0007 + chrX 14216905 intron l(1)G0007 + chrX_6_14215001 chrX_14215001 RAL-392 2517 chrX 14395097 14395132 chrX 14395216 14395251 5 119 1.0 2.0 1.5 2.0 154 chrX 14395097 intron dpr8 + chrX 14395174 intron dpr8 + chrX 14395251 intron dpr8 + chrX_5_14395001 chrX_14395001 RAL-392 2518 chrX 14407248 14407299 chrX 14407350 14407401 13 100 0.5 2.5 1.5 5.2 153 chrX 14407248 intron dpr8 + chrX 14407324 intron dpr8 + chrX 14407401 intron dpr8 + chrX_13_14405001 chrX_14405001 RAL-392 2519 chrX 14411246 14411292 chrX 14411344 14411345 9 89 3.5 4.5 4.0 1.8 99 chrX 14411246 intron dpr8 + chrX 14411296 intron dpr8 + chrX 14411345 intron dpr8 + chrX_9_14410001 chrX_14410001 RAL-392 2520 chrX 14416302 14416319 chrX 14421090 14421102 F-element 6 4786 3.5 8.0 5.8 0.9 4800 chrX 14416302 intron dpr8 + chrX 14418702 intron dpr8 + chrX 14421102 intron dpr8 + chrX_6_14415001 chrX_14415001 RAL-392 2521 chrX 14484963 14484996 chrX 14485067 14485079 5 99 0.0 7.5 3.8 1.0 116 chrX 14484963 intergenic not near genes chrX 14485021 intergenic not near genes chrX 14485079 intergenic not near genes chrX_5_14485001 chrX_14485001 RAL-392 2522 chrX 14531338 14531384 chrX 14531447 14531493 12 106 3.5 1.5 2.5 3.4 155 chrX 14531338 intergenic not near genes chrX 14531416 intergenic not near genes chrX 14531493 intergenic not near genes chrX_12_14530001 chrX_14530001 RAL-392 2523 chrX 14636458 14636480 chrX 14641908 14641911 I-element 6 5446 3.5 5.5 4.5 1.1 5453 chrX 14636458 intron NetA - chrX 14639184 intron NetA - chrX 14641911 intron NetA - chrX_6_14635001 chrX_14635001 RAL-392 2524 chrX 14645529 14645568 chrX 14645633 14645651 7 101 1.0 3.0 2.0 2.3 122 chrX 14645529 intron NetA - chrX 14645590 intron NetA - chrX 14645651 intron NetA - chrX_7_14645001 chrX_14645001 RAL-392 2525 chrX 14767927 14767976 chrX 14768027 14768076 11 91 2.0 6.5 4.2 2.1 149 chrX 14767927 intergenic not near genes chrX 14768002 intergenic not near genes chrX 14768076 intergenic not near genes chrX_11_14765001 chrX_14765001 RAL-392 2526 chrX 14778017 14778053 chrX 14782834 14782870 Doc 5 4817 6.5 6.0 6.2 0.7 4853 chrX 14778017 intergenic CG5347 + chrX 14780444 intergenic not near genes chrX 14782870 intergenic Ag5r2 - chrX_5_14780001 chrX_14780001 RAL-392 2527 chrX 14816899 14816949 chrX 14816997 14817026 12 94 4.0 1.5 2.8 3.2 127 chrX 14816899 intron rut - chrX 14816962 intron rut - chrX 14817026 intron rut - chrX_12_14815001 chrX_14815001 RAL-392 2528 chrX 14936837 14936890 chrX 14946119 14946167 roo 11 9279 0.0 2.0 1.0 5.5 9330 chrX 14936837 intron pdgy - chrX 14941502 intron pdgy - chrX 14946167 intron pdgy - chrX_11_14940001 chrX_14940001 RAL-392 2529 chrX 14960385 14960389 chrX 14960536 14960550 4 158 8.5 2.5 5.5 0.6 165 chrX 14960385 intron eag + chrX 14960468 intron eag + chrX 14960550 intron eag + chrX_4_14960001 chrX_14960001 RAL-392 2530 chrX 14960391 14960416 chrX 14960551 14960577 7 161 3.5 4.0 3.8 1.5 186 chrX 14960391 intron eag + chrX 14960484 intron eag + chrX 14960577 intron eag + chrX_7_14960001 chrX_14960001 RAL-392 2531 chrX 14981687 14981719 chrX 14981786 14981818 5 99 5.0 0.0 2.5 1.4 131 chrX 14981687 intron eag + chrX 14981752 intron eag + chrX 14981818 intron eag + chrX_5_14980001 chrX_14980001 RAL-392 2532 chrX 15149511 15149539 chrX 15149609 15149637 10 98 5.0 3.0 4.0 2.0 126 chrX 15149511 intron CG9095 - chrX 15149574 intron CG9095 - chrX 15149637 intron CG9095 - chrX_10_15145001 chrX_15145001 RAL-392 2533 chrX 15200621 15200637 chrX 15200717 15200725 4 94 3.0 1.0 2.0 1.3 104 chrX 15200621 intergenic not near genes chrX 15200673 intergenic not near genes chrX 15200725 intergenic not near genes chrX_4_15200001 chrX_15200001 RAL-392 2534 chrX 15413047 15413076 chrX 15417356 15417398 Juan 12 4312 9.5 0.5 5.0 2.0 4351 chrX 15413047 intron Cngl - chrX 15415222 intron Cngl - chrX 15417398 intron Cngl - chrX_12_15415001 chrX_15415001 RAL-392 2535 chrX 15435691 15435695 chrX 15436119 15436148 rover 4 444 1.0 5.5 3.2 1.0 457 chrX 15435691 intron Cngl - chrX 15435920 intron Cngl - chrX 15436148 intron Cngl - chrX_4_15435001 chrX_15435001 RAL-392 2536 chrX 15519778 15519813 chrX 15519876 15519896 8 93 2.5 1.0 1.8 2.9 118 chrX 15519778 intron Ac13E - chrX 15519837 intron Ac13E - chrX 15519896 intron Ac13E - chrX_8_15515001 chrX_15515001 RAL-392 2537 chrX 15749648 15749681 chrX 15749771 15749804 15 122 0.5 2.5 1.5 6.0 156 chrX 15749648 intron CG8239 + chrX 15749726 intron CG8239 + chrX 15749804 intron CG8239 + chrX_15_15745001 chrX_15745001 RAL-392 2538 chrX 15952210 15952246 chrX 15952311 15952344 12 91 4.5 5.5 5.0 2.0 134 chrX 15952210 intron mmd - chrX 15952277 intron mmd - chrX 15952344 intron mmd - chrX_12_15950001 chrX_15950001 RAL-392 2539 chrX 16222773 16222810 chrX 16231135 16231165 roo 13 8365 3.0 5.5 4.2 2.5 8392 chrX 16222773 intergenic not near genes chrX 16226969 intergenic not near genes chrX 16231165 intergenic not near genes chrX_13_16225001 chrX_16225001 RAL-392 2540 chrX 16295505 16295556 chrX 16295609 16295620 9 99 0.5 0.0 0.2 7.5 115 chrX 16295505 intron CG9911 - chrX 16295562 intron CG9911 - chrX 16295620 intron CG9911 - chrX_9_16295001 chrX_16295001 RAL-392 2541 chrX 16340647 16340699 chrX 16349822 16349865 roo 13 9173 0.0 5.5 2.8 3.4 9218 chrX 16340647 intergenic Dsp1 + chrX 16345256 intergenic not near genes chrX 16349865 intergenic sl + chrX_13_16345001 chrX_16345001 RAL-392 2542 chrX 16492627 16492679 chrX 16498224 16498251 mdg3 18 5592 7.5 1.5 4.5 3.3 5624 chrX 16492627 intron para - chrX 16495439 intron para - chrX 16498251 intron para - chrX_18_16495001 chrX_16495001 RAL-392 2543 chrX 16689619 16689650 chrX 16689713 16689755 9 93 2.5 3.0 2.8 2.4 136 chrX 16689619 intron Sep4 - chrX 16689687 intron Sep4 - chrX 16689755 intron Sep4 - chrX_9_16685001 chrX_16685001 RAL-392 2544 chrX 16723050 16723096 chrX 16723174 16723208 6 116 1.5 3.5 2.5 1.7 158 chrX 16723050 intron CG32572 + chrX 16723129 intron CG32572 + chrX 16723208 intron CG32572 + chrX_6_16720001 chrX_16720001 RAL-392 2545 chrX 16821235 16821266 chrX 16821335 16821366 5 99 3.5 6.0 4.8 0.9 131 chrX 16821235 intron CG4829 + chrX 16821300 intron CG4829 + chrX 16821366 intron CG4829 + chrX_5_16820001 chrX_16820001 RAL-392 2546 chrX 16898079 16898118 chrX 16898179 16898207 8 98 3.0 3.5 3.2 1.9 128 chrX 16898079 intergenic not near genes chrX 16898143 intergenic not near genes chrX 16898207 intergenic not near genes chrX_8_16895001 chrX_16895001 RAL-392 2547 chrX 17011962 17011999 chrX 17012057 17012098 5 89 1.5 4.5 3.0 1.2 136 chrX 17011962 intron CG45002 - chrX 17012030 intron CG45002 - chrX 17012098 intron CG45002 - chrX_5_17010001 chrX_17010001 RAL-392 2548 chrX 17057916 17057964 chrX 17058177 17058225 pogo 4 261 2.5 1.0 1.8 1.4 309 chrX 17057916 intron CG45002 - chrX 17058070 intron CG45002 - chrX 17058225 intron CG45002 - chrX_4_17055001 chrX_17055001 RAL-392 2549 chrX 17195208 17195232 chrX 17200312 17200333 flea 5 5103 6.5 5.0 5.8 0.7 5125 chrX 17195208 3` UTR baz + chrX 17197770 3` UTR baz + chrX 17200333 3` UTR baz + chrX_5_17195001 chrX_17195001 RAL-392 2550 chrX 17205829 17205858 chrX 17205939 17205968 7 107 4.0 5.5 4.8 1.2 139 chrX 17205829 intergenic not near genes chrX 17205898 intergenic not near genes chrX 17205968 intergenic CG32564 + chrX_7_17205001 chrX_17205001 RAL-392 2551 chrX 17316362 17316363 chrX 17316451 17316467 4 98 12.5 1.0 6.8 0.5 105 chrX 17316362 intron B-H2 + chrX 17316414 intron B-H2 + chrX 17316467 intron B-H2 + chrX_4_17315001 chrX_17315001 RAL-392 2552 chrX 17316367 17316397 chrX 17316450 17316481 6 96 3.5 1.0 2.2 1.9 114 chrX 17316367 intron B-H2 + chrX 17316424 intron B-H2 + chrX 17316481 intron B-H2 + chrX_6_17315001 chrX_17315001 RAL-392 2553 chrX 17332498 17332511 chrX 17332595 17332608 5 97 0.0 3.5 1.8 1.8 110 chrX 17332498 intergenic not near genes chrX 17332553 intergenic not near genes chrX 17332608 intergenic not near genes chrX_5_17330001 chrX_17330001 RAL-392 2554 chrX 17352577 17352623 chrX 17352691 17352726 7 110 1.0 7.0 4.0 1.4 149 chrX 17352577 intergenic not near genes chrX 17352652 intergenic not near genes chrX 17352726 intergenic not near genes chrX_7_17350001 chrX_17350001 RAL-392 2555 chrX 17372211 17372220 chrX 17372320 17372329 6 109 1.0 6.5 3.8 1.2 118 chrX 17372211 intergenic not near genes chrX 17372270 intergenic not near genes chrX 17372329 intergenic not near genes chrX_6_17370001 chrX_17370001 RAL-392 2556 chrX 17373354 17373395 chrX 17373472 17373494 11 110 3.0 6.0 4.5 2.0 140 chrX 17373354 intergenic not near genes chrX 17373424 intergenic not near genes chrX 17373494 intergenic not near genes chrX_11_17370001 chrX_17370001 RAL-392 2557 chrX 17435731 17435782 chrX 17435827 17435878 16 93 4.5 5.5 5.0 2.7 147 chrX 17435731 intron CG12994 - chrX 17435804 intron CG12994 - chrX 17435878 intron CG12994 - chrX_16_17435001 chrX_17435001 RAL-392 2558 chrX 17502336 17502372 chrX 17502436 17502460 5 96 4.0 5.5 4.8 0.9 124 chrX 17502336 intron CG43658 - chrX 17502398 intron CG43658 - chrX 17502460 intron CG43658 - chrX_5_17500001 chrX_17500001 RAL-392 2559 chrX 17544996 17545036 chrX 17545098 17545130 5 99 3.5 3.0 3.2 1.2 134 chrX 17544996 intron CG43658 - chrX 17545063 intron CG43658 - chrX 17545130 intron CG43658 - chrX_5_17545001 chrX_17545001 RAL-392 2560 chrX 17657084 17657109 chrX 17657173 17657209 8 97 2.0 5.0 3.5 1.8 125 chrX 17657084 intergenic IntS2 -,beta-Spec + chrX 17657146 intergenic beta-Spec +,IntS2 - chrX 17657209 intergenic beta-Spec +,IntS2 - chrX_8_17655001 chrX_17655001 RAL-392 2561 chrX 17708812 17708849 chrX 17708909 17708948 7 97 4.0 4.0 4.0 1.4 136 chrX 17708812 intron CG8173 - chrX 17708880 intron CG8173 - chrX 17708948 intron CG8173 - chrX_7_17705001 chrX_17705001 RAL-392 2562 chrX 18052412 18052435 chrX 18055350 18055373 9 2939 22.5 22.0 22.2 0.4 2961 chrX 18052412 intron Sh - chrX 18053892 intron Sh - chrX 18055373 intron Sh - chrX_9_18050001 chrX_18050001 RAL-392 2563 chrX 18126593 18126824 chrX 18126726 18126900 16 126 5.0 5.0 5.0 2.7 307 chrX 18126593 intron CG32553 - chrX 18126746 intron CG32553 - chrX 18126900 intron CG32553 - chrX_16_18125001 chrX_18125001 RAL-392 2564 chrX 18177011 18177041 chrX 18177124 18177143 9 107 5.0 2.5 3.8 1.9 132 chrX 18177011 intergenic not near genes chrX 18177077 intergenic not near genes chrX 18177143 intergenic Frq2 + chrX_9_18175001 chrX_18175001 RAL-392 2565 chrX 18177044 18177059 chrX 18177123 18177151 4 92 3.0 2.5 2.8 1.1 107 chrX 18177044 intergenic not near genes chrX 18177098 intergenic not near genes chrX 18177151 intergenic Frq2 + chrX_4_18175001 chrX_18175001 RAL-392 2566 chrX 18194056 18194101 chrX 18194611 18194623 BS 6 550 7.5 4.0 5.8 0.9 567 chrX 18194056 intron Frq2 + chrX 18194340 intron Frq2 + chrX 18194623 intron Frq2 + chrX_6_18190001 chrX_18190001 RAL-392 2567 chrX 18429490 18429526 chrX 18434805 18434836 Transpac 7 5326 3.0 6.0 4.5 1.3 5346 chrX 18429490 intergenic not near genes chrX 18432163 intergenic not near genes chrX 18434836 intergenic not near genes chrX_7_18430001 chrX_18430001 RAL-392 2568 chrX 18529380 18529397 chrX 18529476 18529476 6 93 4.5 3.5 4.0 1.2 96 chrX 18529380 intron,3` UTR Bx +,CG15047 + chrX 18529428 intron,3` UTR Bx +,CG15047 + chrX 18529476 intron,3` UTR Bx +,CG15047 + chrX_6_18525001 chrX_18525001 RAL-392 2569 chrX 18558756 18558803 chrX 18558858 18558897 7 100 1.0 1.5 1.2 3.2 141 chrX 18558756 intron Bx + chrX 18558826 intron Bx + chrX 18558897 intron Bx + chrX_7_18555001 chrX_18555001 RAL-392 2570 chrX 12946235 12946235 chrX 18572525 18572525 4 5626290 24.5 22.0 23.2 0.2 5626290 chrX 12946235 3` UTR fne + chrX 15759380 intron Graf - chrX 18572525 intergenic not near genes chrX_4_15755001 chrX_15755001 RAL-392 2571 chrX 18644998 18645045 chrX 18645111 18645121 5 106 3.5 4.5 4.0 1.0 123 chrX 18644998 intron Rip11 - chrX 18645060 intron Rip11 - chrX 18645121 intron Rip11 - chrX_5_18645001 chrX_18645001 RAL-392 2572 chrX 18671202 18671234 chrX 18671304 18671306 6 97 4.0 1.5 2.8 1.6 104 chrX 18671202 intergenic not near genes chrX 18671254 intergenic not near genes chrX 18671306 intergenic not near genes chrX_6_18670001 chrX_18670001 RAL-392 2573 chrX 18698828 18698877 chrX 18698964 18699014 13 133 4.0 3.5 3.8 2.7 186 chrX 18698828 intergenic not near genes chrX 18698921 intergenic not near genes chrX 18699014 intergenic not near genes chrX_13_18695001 chrX_18695001 RAL-392 2574 chrX 18714120 18714167 chrX 18714223 18714229 8 92 3.0 2.5 2.8 2.1 109 chrX 18714120 intron CCKLR-17D1 - chrX 18714174 intron CCKLR-17D1 - chrX 18714229 intron CCKLR-17D1 - chrX_8_18710001 chrX_18710001 RAL-392 2575 chrX 18749619 18749648 chrX 18749709 18749751 7 94 0.5 6.0 3.2 1.7 132 chrX 18749619 intergenic not near genes chrX 18749685 intergenic not near genes chrX 18749751 intergenic not near genes chrX_7_18745001 chrX_18745001 RAL-392 2576 chrX 18754334 18754345 chrX 18758001 18758032 297 5 3677 4.5 4.5 4.5 0.9 3698 chrX 18754334 intergenic not near genes chrX 18756183 intergenic not near genes chrX 18758032 intergenic not near genes chrX_5_18755001 chrX_18755001 RAL-392 2577 chrX 18774432 18774454 chrX 18774532 18774554 5 98 5.5 4.0 4.8 0.9 122 chrX 18774432 intergenic CCKLR-17D3 - chrX 18774493 intergenic CCKLR-17D3 - chrX 18774554 intergenic not near genes chrX_5_18770001 chrX_18770001 RAL-392 2578 chrX 18926527 18926535 chrX 18926633 18926647 5 110 1.5 0.0 0.8 2.8 120 chrX 18926527 intergenic not near genes chrX 18926587 intergenic not near genes chrX 18926647 intergenic not near genes chrX_5_18925001 chrX_18925001 RAL-392 2579 chrX 18946170 18946183 chrX 18946277 18946285 5 106 1.5 4.0 2.8 1.3 115 chrX 18946170 intron CG43759 + chrX 18946228 intron CG43759 + chrX 18946285 intron CG43759 + chrX_5_18945001 chrX_18945001 RAL-392 2580 chrX 18947506 18947535 chrX 18947593 18947648 13 107 2.5 2.5 2.5 3.7 142 chrX 18947506 intron CG43759 + chrX 18947577 intron CG43759 + chrX 18947648 intron CG43759 + chrX_13_18945001 chrX_18945001 RAL-392 2581 chrX 18957055 18957076 chrX 18965731 18965752 roo 5 8676 1.5 0.0 0.8 2.8 8697 chrX 18957055 intron CG43759 + chrX 18961404 intron CG43759 + chrX 18965752 intron CG43759 + chrX_5_18960001 chrX_18960001 RAL-392 2582 chrX 19060391 19060436 chrX 19065195 19065240 Doc 13 4803 2.5 7.5 5.0 2.2 4849 chrX 19060391 intron CG14190 + chrX 19062816 intron CG14190 + chrX 19065240 intron CG14190 + chrX_13_19060001 chrX_19060001 RAL-392 2583 chrX 19084086 19084122 chrX 19084226 19084249 5 134 0.0 3.5 1.8 1.8 163 chrX 19084086 intergenic CR45503 + chrX 19084168 intergenic CR45503 + chrX 19084249 intergenic CR45503 + chrX_5_19080001 chrX_19080001 RAL-392 2584 chrX 19099634 19099682 chrX 19099737 19099785 8 100 6.0 3.5 4.8 1.4 151 chrX 19099634 intergenic not near genes chrX 19099710 intergenic not near genes chrX 19099785 intergenic not near genes chrX_8_19095001 chrX_19095001 RAL-392 2585 chrX 19109123 19109140 chrX 19109295 19109318 6 191 0.0 0.5 0.2 5.0 195 chrX 19109123 intergenic not near genes chrX 19109220 intergenic not near genes chrX 19109318 intergenic not near genes chrX_6_19105001 chrX_19105001 RAL-392 2586 chrX 19119681 19119707 chrX 19119787 19119813 4 104 3.5 0.0 1.8 1.4 132 chrX 19119681 intergenic not near genes chrX 19119747 intergenic not near genes chrX 19119813 intergenic not near genes chrX_4_19115001 chrX_19115001 RAL-392 2587 chrX 19124421 19124462 chrX 19124523 19124571 5 103 2.5 3.0 2.8 1.3 150 chrX 19124421 intergenic CG15882 - chrX 19124496 intergenic CG15882 - chrX 19124571 intergenic CG15882 -,tgy - chrX_5_19120001 chrX_19120001 RAL-392 2588 chrX 19125672 19125719 chrX 19125821 19125861 20 144 6.5 8.0 7.2 2.4 189 chrX 19125672 intron tgy - chrX 19125766 intron tgy - chrX 19125861 intron tgy - chrX_20_19125001 chrX_19125001 RAL-392 2589 chrX 19136533 19136585 chrX 19143473 19143524 412 9 6925 1.0 0.5 0.8 5.0 6991 chrX 19136533 intergenic not near genes chrX 19140028 intergenic not near genes chrX 19143524 3` UTR RhoGAP18B - chrX_9_19140001 chrX_19140001 RAL-392 2590 chrX 19310599 19310645 chrX 19310885 19310906 13 281 2.5 9.5 6.0 1.9 307 chrX 19310599 3` UTR out - chrX 19310752 3` UTR out - chrX 19310906 3` UTR out - chrX_13_19310001 chrX_19310001 RAL-392 2591 chrX 19330460 19330471 chrX 19330580 19330589 6 121 2.5 2.0 2.2 1.9 129 chrX 19330460 intron nAChRalpha7 - chrX 19330524 intron nAChRalpha7 - chrX 19330589 intron nAChRalpha7 - chrX_6_19330001 chrX_19330001 RAL-392 2592 chrX 19339736 19339771 chrX 19339818 19339867 15 90 1.5 7.0 4.2 2.9 131 chrX 19339736 intron nAChRalpha7 - chrX 19339802 intron nAChRalpha7 - chrX 19339867 intron nAChRalpha7 - chrX_15_19335001 chrX_19335001 RAL-392 2593 chrX 19352461 19352499 chrX 19370490 19370525 6 18024 21.5 6.0 13.8 0.4 18064 chrX 19352461 intergenic not near genes chrX 19361493 intron kek5 + chrX 19370525 intron kek5 + chrX_6_19360001 chrX_19360001 RAL-392 2594 chrX 19356971 19357020 chrX 19358432 19358499 NOF 13 1460 8.0 1.0 4.5 2.4 1528 chrX 19356971 intron kek5 + chrX 19357735 intron kek5 + chrX 19358499 intron kek5 + chrX_13_19355001 chrX_19355001 RAL-392 2595 chrX 19380159 19380182 chrX 19380406 19380443 pogo 12 256 4.0 3.0 3.5 2.7 284 chrX 19380159 intron kek5 + chrX 19380301 intron kek5 + chrX 19380443 intron kek5 + chrX_12_19380001 chrX_19380001 RAL-392 2596 chrX 19472110 19472156 chrX 19472700 19472745 jockey 9 583 2.5 3.0 2.8 2.4 635 chrX 19472110 intergenic kek5 + chrX 19472428 intergenic not near genes chrX 19472745 intergenic not near genes chrX_9_19470001 chrX_19470001 RAL-392 2597 chrX 19542115 19542135 chrX 19542233 19542253 5 116 4.0 2.0 3.0 1.2 138 chrX 19542115 intron CG32532 - chrX 19542184 intron CG32532 - chrX 19542253 intron CG32532 - chrX_5_19540001 chrX_19540001 RAL-392 2598 chrX 19542137 19542166 chrX 19542231 19542284 9 111 2.0 2.0 2.0 3.0 147 chrX 19542137 intron CG32532 - chrX 19542210 intron CG32532 - chrX 19542284 intron CG32532 - chrX_9_19540001 chrX_19540001 RAL-392 2599 chrX 19662051 19662056 chrX 19662258 19662299 5 224 6.0 4.5 5.2 0.8 248 chrX 19662051 intron CG14223 - chrX 19662175 intron CG14223 - chrX 19662299 intron CG14223 - chrX_5_19660001 chrX_19660001 RAL-392 2600 chrX 19680374 19680403 chrX 19680505 19680537 10 129 6.5 4.0 5.2 1.6 163 chrX 19680374 intron dome - chrX 19680456 intron dome - chrX 19680537 intron dome - chrX_10_19680001 chrX_19680001 RAL-392 2601 chrX 19680408 19680410 chrX 19680500 19680537 4 114 5.5 3.5 4.5 0.7 129 chrX 19680408 intron dome - chrX 19680472 intron dome - chrX 19680537 intron dome - chrX_4_19680001 chrX_19680001 RAL-392 2602 chrX 19710075 19710100 chrX 19711861 19711906 S-element 6 1786 4.5 3.5 4.0 1.2 1831 chrX 19710075 intron meso18E - chrX 19710990 intron meso18E - chrX 19711906 intron meso18E - chrX_6_19710001 chrX_19710001 RAL-392 2603 chrX 19880382 19880393 chrX 19880521 19880532 5 139 3.0 6.5 4.8 0.9 150 chrX 19880382 intron Hers + chrX 19880457 intron Hers + chrX 19880532 intron Hers + chrX_5_19880001 chrX_19880001 RAL-392 2604 chrX 19881447 19881485 chrX 19881537 19881586 17 95 4.5 1.5 3.0 4.2 139 chrX 19881447 intron Hers + chrX 19881516 intron Hers + chrX 19881586 intron Hers + chrX_17_19880001 chrX_19880001 RAL-392 2605 chrX 19897363 19897415 chrX 19897460 19897512 22 89 5.0 6.5 5.8 3.2 149 chrX 19897363 intron Hers + chrX 19897438 intron Hers + chrX 19897512 intron Hers + chrX_22_19895001 chrX_19895001 RAL-392 2606 chrX 19983855 19983892 chrX 19983944 19983991 9 95 0.0 0.0 0.0 9.0 136 chrX 19983855 intergenic not near genes chrX 19983923 intergenic not near genes chrX 19983991 intergenic not near genes chrX_9_19980001 chrX_19980001 RAL-392 2607 chrX 20084928 20084944 chrX 20085436 20085462 5 533 1.0 3.5 2.2 1.6 534 chrX 20084928 intergenic not near genes chrX 20085195 intergenic not near genes chrX 20085462 intergenic not near genes chrX_5_20085001 chrX_20085001 RAL-392 2608 chrX 20123024 20123045 chrX 20123161 20123182 7 135 8.5 1.5 5.0 1.2 158 chrX 20123024 intron CG34331 + chrX 20123103 intron CG34331 + chrX 20123182 intron CG34331 + chrX_7_20120001 chrX_20120001 RAL-392 2609 chrX 20123050 20123064 chrX 20123160 20123187 6 120 6.0 1.5 3.8 1.2 137 chrX 20123050 intron CG34331 + chrX 20123118 intron CG34331 + chrX 20123187 intron CG34331 + chrX_6_20120001 chrX_20120001 RAL-392 2610 chrX 20124071 20124091 chrX 20124230 20124249 5 157 8.0 3.5 5.8 0.7 178 chrX 20124071 intron CG34331 + chrX 20124160 intron CG34331 + chrX 20124249 intron CG34331 + chrX_5_20120001 chrX_20120001 RAL-392 2611 chrX 20257748 20257776 chrX 20257849 20257882 4 104 2.5 3.5 3.0 1.0 134 chrX 20257748 intergenic not near genes chrX 20257815 intergenic not near genes chrX 20257882 intergenic not near genes chrX_4_20255001 chrX_20255001 RAL-392 2612 chrX 20271483 20271522 chrX 20271595 20271634 9 110 6.0 0.0 3.0 2.2 151 chrX 20271483 intergenic not near genes chrX 20271558 intergenic not near genes chrX 20271634 intergenic not near genes chrX_9_20270001 chrX_20270001 RAL-392 2613 chrX 20279731 20279765 chrX 20279832 20279866 13 98 5.0 2.5 3.8 2.7 135 chrX 20279731 intergenic not near genes chrX 20279798 intergenic not near genes chrX 20279866 intergenic not near genes chrX_13_20275001 chrX_20275001 RAL-392 2614 chrX 20312861 20312909 chrX 20312958 20312983 9 90 3.0 1.0 2.0 3.0 122 chrX 20312861 intron CG1504 - chrX 20312922 intron CG1504 - chrX 20312983 intron CG1504 - chrX_9_20310001 chrX_20310001 RAL-392 2615 chrX 20369311 20369343 chrX 20369415 20369442 18 102 1.0 4.5 2.8 4.7 131 chrX 20369311 intergenic not near genes chrX 20369376 intergenic not near genes chrX 20369442 intergenic not near genes chrX_18_20365001 chrX_20365001 RAL-392 2616 chrX 20377328 20377343 chrX 20378783 20378813 hobo 5 1476 6.0 1.5 3.8 1.0 1485 chrX 20377328 intergenic not near genes chrX 20378070 intergenic not near genes chrX 20378813 intergenic not near genes chrX_5_20375001 chrX_20375001 RAL-392 2617 chrX 20443162 20443172 chrX 20443257 20443268 7 95 9.5 7.5 8.5 0.7 106 chrX 20443162 exon CG1695 + chrX 20443215 intron CG1695 + chrX 20443268 intron CG1695 + chrX_7_20440001 chrX_20440001 RAL-392 2618 chrX 20443183 20443203 chrX 20443256 20443269 6 84 5.5 7.0 6.2 0.8 86 chrX 20443183 intron CG1695 + chrX 20443226 intron CG1695 + chrX 20443269 intron CG1695 + chrX_6_20440001 chrX_20440001 RAL-392 2619 chrX 20468001 20468041 chrX 20468110 20468134 11 102 4.0 0.0 2.0 3.7 133 chrX 20468001 intron GstT3 + chrX 20468068 intron GstT3 + chrX 20468134 intron GstT3 + chrX_11_20465001 chrX_20465001 RAL-392 2620 chrX 20493918 20493928 chrX 20494091 20494094 7 176 0.0 14.0 7.0 0.9 176 chrX 20493918 intron RhoGAP19D - chrX 20494006 intron RhoGAP19D - chrX 20494094 intron RhoGAP19D - chrX_7_20490001 chrX_20490001 RAL-392 2621 chrX 20504109 20504145 chrX 20505649 20505686 transib2 8 1540 8.0 4.5 6.2 1.1 1577 chrX 20504109 intron RhoGAP19D - chrX 20504898 intron RhoGAP19D - chrX 20505686 intron RhoGAP19D - chrX_8_20500001 chrX_20500001 RAL-392 2622 chrX 20578136 20578184 chrX 20578273 20578321 5 136 2.5 3.0 2.8 1.3 185 chrX 20578136 intergenic not near genes chrX 20578228 intergenic not near genes chrX 20578321 intergenic not near genes chrX_5_20575001 chrX_20575001 RAL-392 2623 chrX 20580637 20580687 chrX 20580737 20580784 17 97 4.0 2.0 3.0 4.2 147 chrX 20580637 intergenic not near genes chrX 20580710 intergenic not near genes chrX 20580784 intergenic not near genes chrX_17_20580001 chrX_20580001 RAL-392 2624 chrX 20635415 20635446 chrX 20635601 20635632 9 183 3.0 6.0 4.5 1.6 217 chrX 20635415 intergenic not near genes chrX 20635524 intergenic not near genes chrX 20635632 intergenic not near genes chrX_9_20635001 chrX_20635001 RAL-392 2625 chrX 20670921 20670959 chrX 20671032 20671035 7 103 4.0 4.5 4.2 1.3 114 chrX 20670921 3` UTR hydra - chrX 20670978 3` UTR hydra - chrX 20671035 3` UTR hydra - chrX_7_20670001 chrX_20670001 RAL-392 2626 chrX 20710412 20710441 chrX 20710500 20710538 6 96 0.5 0.5 0.5 4.0 126 chrX 20710412 intergenic not near genes chrX 20710475 intergenic not near genes chrX 20710538 intergenic not near genes chrX_6_20710001 chrX_20710001 RAL-392 2627 chrX 20774552 20774595 chrX 20774643 20774645 8 78 3.0 0.5 1.8 2.9 93 chrX 20774552 intron shakB - chrX 20774598 intron shakB - chrX 20774645 intron shakB - chrX_8_20770001 chrX_20770001 RAL-392 2628 chrX 20836710 20836757 chrX 20844332 20844379 roo 8 7617 3.0 4.0 3.5 1.8 7669 chrX 20836710 intron shakB - chrX 20840544 intron shakB - chrX 20844379 intron shakB - chrX_8_20840001 chrX_20840001 RAL-392 2629 chrX 20940702 20940730 chrX 20942189 20942219 hobo 7 1488 8.5 1.5 5.0 1.2 1517 chrX 20940702 intergenic not near genes chrX 20941460 intergenic not near genes chrX 20942219 intergenic not near genes chrX_7_20940001 chrX_20940001 RAL-392 2630 chrX 20940732 20940745 chrX 20942185 20942222 hobo 6 1461 7.0 1.0 4.0 1.2 1490 chrX 20940732 intergenic not near genes chrX 20941477 intergenic not near genes chrX 20942222 intergenic not near genes chrX_6_20940001 chrX_20940001 RAL-392 2631 chrX 20948239 20948283 chrX 20948348 20948392 11 108 0.0 3.0 1.5 4.4 153 chrX 20948239 intergenic not near genes chrX 20948316 intergenic not near genes chrX 20948392 intergenic not near genes chrX_11_20945001 chrX_20945001 RAL-392 2632 chrX 20981006 20981049 chrX 20981129 20981155 15 118 5.0 2.5 3.8 3.1 149 chrX 20981006 intergenic not near genes chrX 20981080 intergenic not near genes chrX 20981155 intergenic not near genes chrX_15_20980001 chrX_20980001 RAL-392 2633 chrX 21061850 21061890 chrX 21062356 21062356 roo 13 501 5.0 2.5 3.8 2.7 506 chrX 21061850 intron bves + chrX 21062103 intron bves + chrX 21062356 intron,3` UTR bves +,CG32512 - chrX_13_21060001 chrX_21060001 RAL-392 2634 chrX 21076311 21076357 chrX 21076410 21076456 16 96 4.0 0.0 2.0 5.3 145 chrX 21076311 intron bves + chrX 21076384 intron bves + chrX 21076456 intron bves + chrX_16_21075001 chrX_21075001 RAL-392 2635 chrX 21086127 21086161 chrX 21087157 21087210 jockey 9 1047 3.0 3.5 3.2 2.1 1083 chrX 21086127 intergenic not near genes chrX 21086668 intergenic not near genes chrX 21087210 intergenic not near genes chrX_9_21085001 chrX_21085001 RAL-392 2636 chrX 21089146 21089175 chrX 21089251 21089289 6 112 2.5 4.0 3.2 1.4 143 chrX 21089146 intergenic not near genes chrX 21089218 intergenic not near genes chrX 21089289 intergenic not near genes chrX_6_21085001 chrX_21085001 RAL-392 2637 chrX 21184780 21184815 chrX 21184992 21185013 10 214 3.0 2.0 2.5 2.9 233 chrX 21184780 intergenic not near genes chrX 21184896 intergenic not near genes chrX 21185013 intergenic not near genes chrX_10_21180001 chrX_21180001 RAL-392 2638 chrX 21260015 21260027 chrX 21260083 21260130 6 94 2.0 1.0 1.5 2.4 115 chrX 21260015 intron CG32521 - chrX 21260072 intron CG32521 - chrX 21260130 intron CG32521 - chrX_6_21260001 chrX_21260001 RAL-392 2639 chrX 21328097 21328145 chrX 21328228 21328256 18 126 3.5 1.5 2.5 5.1 159 chrX 21328097 3` UTR CG1486 + chrX 21328176 intergenic CG1486 +,tty - chrX 21328256 intergenic CG1486 +,tty - chrX_18_21325001 chrX_21325001 RAL-392 2640 chrX 21419705 21419737 chrX 21419793 21419846 10 99 1.0 6.0 3.5 2.2 141 chrX 21419705 intergenic not near genes chrX 21419776 intergenic not near genes chrX 21419846 intergenic not near genes chrX_10_21415001 chrX_21415001 RAL-392 2641 chrX 21439518 21439569 chrX 21439619 21439655 17 97 4.0 4.0 4.0 3.4 137 chrX 21439518 intron CG42343 - chrX 21439586 intron CG42343 - chrX 21439655 intron CG42343 - chrX_17_21435001 chrX_21435001 RAL-392 2642 chrX 21458671 21458727 chrX 21464127 21464183 Ivk 12 5445 3.5 3.5 3.5 2.7 5512 chrX 21458671 intergenic not near genes chrX 21461427 intergenic not near genes chrX 21464183 intergenic not near genes chrX_12_21460001 chrX_21460001 RAL-392 2643 chrX 21467020 21467029 chrX 21467103 21467133 4 91 5.5 3.0 4.2 0.8 113 chrX 21467020 intergenic CR45507 - chrX 21467076 intergenic CR45507 - chrX 21467133 3` UTR CR45507 - chrX_4_21465001 chrX_21465001 RAL-392 2644 chrX 21474411 21474435 chrX 21474770 21474810 1731 6 375 4.0 4.5 4.2 1.2 399 chrX 21474411 intergenic not near genes chrX 21474610 intergenic not near genes chrX 21474810 intergenic not near genes chrX_6_21470001 chrX_21470001 RAL-392 2645 chrX 21565399 21565431 chrX 21565497 21565529 4 93 5.5 1.5 3.5 0.9 130 chrX 21565399 intergenic not near genes chrX 21565464 intergenic not near genes chrX 21565529 intergenic not near genes chrX_4_21565001 chrX_21565001 RAL-392 2646 chrX 21668239 21668270 chrX 21668343 21668345 13 99 21.5 18.0 19.8 0.6 106 chrX 21668239 intergenic not near genes chrX 21668292 intergenic not near genes chrX 21668345 intergenic not near genes chrX_13_21665001 chrX_21665001 RAL-392 2647 chrX 21668271 21668288 chrX 21668340 21668343 10 86 20.0 18.5 19.2 0.5 72 chrX 21668271 intergenic not near genes chrX 21668307 intergenic not near genes chrX 21668343 intergenic not near genes chrX_10_21665001 chrX_21665001 RAL-392 2648 chrX 22448252 22448286 chrX 22448411 22448435 4 155 4.5 12.5 8.5 0.4 183 chrX 22448252 intron CG14615 - chrX 22448344 intron CG14615 - chrX 22448435 intron CG14615 - chrX_4_22445001 chrX_22445001 RAL-392 2649 chrX 22478875 22478896 chrX 22479016 22479048 10 151 0.5 6.5 3.5 2.2 173 chrX 22478875 intron CG12576 - chrX 22478962 intron CG12576 - chrX 22479048 intron CG12576 - chrX_10_22475001 chrX_22475001 RAL-392 2650 chrX 22522638 22522644 chrX 22525460 22525473 NOF 4 2833 5.5 0.5 3.0 1.0 2835 chrX 22522638 intron CG17600 + chrX 22524056 intron CG17600 + chrX 22525473 intron CG17600 + chrX_4_22520001 chrX_22520001 RAL-392 2651 chrX 22549751 22549763 chrX 22549956 22549968 4 205 9.5 1.0 5.2 0.6 217 chrX 22549751 intergenic not near genes chrX 22549860 intergenic not near genes chrX 22549968 intergenic not near genes chrX_4_22545001 chrX_22545001 RAL-392 2652 chrX 22596929 22596973 chrX 22597320 22597353 5 381 2.5 2.5 2.5 1.4 424 chrX 22596929 intron Cda4 - chrX 22597141 intron Cda4 - chrX 22597353 intron Cda4 - chrX_5_22595001 chrX_22595001 RAL-392 2653 chrX 22614411 22614449 chrX 22614708 22614746 11 292 3.0 3.0 3.0 2.8 335 chrX 22614411 intron Cda4 - chrX 22614578 intron Cda4 - chrX 22614746 intron Cda4 - chrX_11_22610001 chrX_22610001 RAL-392 2654 chrX 22660551 22660596 chrX 22660655 22660675 9 90 5.5 0.5 3.0 2.2 124 chrX 22660551 intron CR44997 + chrX 22660613 intron CR44997 + chrX 22660675 intron CR44997 + chrX_9_22660001 chrX_22660001 RAL-392 2655 chrX 22697495 22697523 chrX 22701812 22701820 Juan 8 4314 8.0 6.5 7.2 1.0 4325 chrX 22697495 intron CR44997 + chrX 22699658 intron CR44997 + chrX 22701820 intron CR44997 + chrX_8_22695001 chrX_22695001 RAL-392 2656 chrX 22771488 22771536 chrX 22774799 22774807 297 4 3301 3.0 3.0 3.0 1.0 3319 chrX 22771488 intron CR44997 + chrX 22773148 intron CR44997 + chrX 22774807 intron CR44997 + chrX_4_22770001 chrX_22770001 RAL-392 2657 chrX 22784057 22784106 chrX 22784160 22784209 17 96 2.0 2.5 2.2 5.3 152 chrX 22784057 intron CR44997 + chrX 22784133 intron CR44997 + chrX 22784209 intron CR44997 + chrX_17_22780001 chrX_22780001 RAL-392 2658 chrX 22785590 22785642 chrX 22785701 22785743 8 100 4.5 1.5 3.0 2.0 153 chrX 22785590 intron CR44997 + chrX 22785666 intron CR44997 + chrX 22785743 intron CR44997 + chrX_8_22785001 chrX_22785001 RAL-392 2659 chrX 22797013 22797023 chrX 22797082 22797125 5 83 0.0 6.0 3.0 1.2 112 chrX 22797013 intron CR44997 + chrX 22797069 intron CR44997 + chrX 22797125 intron CR44997 + chrX_5_22795001 chrX_22795001 RAL-392 2660 chrX 22824226 22824439 chrX 22824365 22824592 22 146 6.5 11.0 8.8 2.2 366 chrX 22824226 intergenic fog - chrX 22824409 3` UTR fog - chrX 22824592 3` UTR fog - chrX_22_22820001 chrX_22820001 RAL-392 2661 chrX 22867965 22867997 chrX 22868099 22868115 5 122 5.0 2.0 3.5 1.1 150 chrX 22867965 exon CG42346 + chrX 22868040 intron CG42346 + chrX 22868115 intron CG42346 + chrX_5_22865001 chrX_22865001 RAL-392 2662 chrX 22987099 22987118 chrX 22989770 22989781 Burdock 7 2672 4.0 4.0 4.0 1.4 2682 chrX 22987099 intron,intron stnA -,stnB - chrX 22988440 intron,intron stnA -,stnB - chrX 22989781 intron,intron stnA -,stnB - chrX_7_22985001 chrX_22985001 RAL-392 2663 chrX 22996305 22996337 chrX 23003548 23003591 roo 16 7247 2.5 9.5 6.0 2.3 7286 chrX 22996305 intron,intron stnA -,stnB - chrX 22999948 intron,intron stnA -,stnB - chrX 23003591 intron,intron stnA -,stnB - chrX_16_22995001 chrX_22995001 RAL-392 2664 chrY 1419883 1419919 chrY 1420157 1420193 5 271 11.5 14.5 13.0 0.4 310 chrY 1419883 intergenic not near genes chrY 1420038 intergenic not near genes chrY 1420193 intergenic not near genes chrY_5_1420001 chrY_1420001 RAL-392 2665 chrY 1420638 1420650 chrY 1420735 1420747 5 97 10.5 12.5 11.5 0.4 109 chrY 1420638 intergenic not near genes chrY 1420692 intergenic not near genes chrY 1420747 intergenic not near genes chrY_5_1420001 chrY_1420001 RAL-392 2666 chrY 1420638 1420640 chrY 1420764 1420776 4 129 11.0 14.0 12.5 0.3 138 chrY 1420638 intergenic not near genes chrY 1420707 intergenic not near genes chrY 1420776 intergenic not near genes chrY_4_1420001 chrY_1420001 RAL-392 2667 chrY 3666435 3666460 chrY 3666596 3666633 5 168 0.5 2.0 1.2 2.3 198 chrY 3666435 intergenic not near genes chrY 3666534 intergenic not near genes chrY 3666633 intergenic not near genes chrY_5_3665001 chrY_3665001 RAL-392