SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 89718 89746 chr2L 89795 89823 5 77 1.0 0.5 0.8 2.8 105 chr2L 89718 intergenic not near genes chr2L 89770 intergenic not near genes chr2L 89823 intergenic not near genes chr2L_5_85001 chr2L_85001 RAL-391_75b 2 chr2L 172031 172047 chr2L 172141 172157 5 110 0.5 1.5 1.0 2.5 126 chr2L 172031 intron spen + chr2L 172094 intron spen + chr2L 172157 intron spen + chr2L_5_170001 chr2L_170001 RAL-391_75b 3 chr2L 347895 347915 chr2L 355395 355415 blood 4 7500 2.0 1.5 1.8 1.4 7520 chr2L 347895 3` UTR Plc21C + chr2L 351655 intron Plc21C + chr2L 355415 3` UTR Plc21C + chr2L_4_350001 chr2L_350001 RAL-391_75b 4 chr2L 489529 489567 chr2L 489614 489652 8 84 1.0 2.0 1.5 3.2 123 chr2L 489529 intron ush + chr2L 489590 intron ush + chr2L 489652 intron ush + chr2L_8_485001 chr2L_485001 RAL-391_75b 5 chr2L 686918 686952 chr2L 695958 695991 roo 7 9039 0.5 0.5 0.5 4.7 9073 chr2L 686918 intron ds - chr2L 691454 intron ds - chr2L 695991 intron ds - chr2L_7_690001 chr2L_690001 RAL-391_75b 6 chr2L 770467 770473 chr2L 772248 772253 Bari1 4 1780 1.5 1.0 1.2 1.8 1786 chr2L 770467 intergenic not near genes chr2L 771360 intergenic not near genes chr2L 772253 intergenic CR44614 + chr2L_4_770001 chr2L_770001 RAL-391_75b 7 chr2L 1036461 1036477 chr2L 1036550 1036565 4 89 1.5 0.5 1.0 2.0 104 chr2L 1036461 intron IA-2 - chr2L 1036513 intron IA-2 - chr2L 1036565 intron IA-2 - chr2L_4_1035001 chr2L_1035001 RAL-391_75b 8 chr2L 1126672 1126703 chr2L 1126748 1126777 6 75 0.5 1.5 1.0 3.0 105 chr2L 1126672 intron Pino - chr2L 1126724 intron Pino - chr2L 1126777 intron Pino - chr2L_6_1125001 chr2L_1125001 RAL-391_75b 9 chr2L 1137668 1137683 chr2L 1137848 1137863 7 180 2.0 3.0 2.5 2.0 195 chr2L 1137668 intron CG4577 + chr2L 1137766 intron CG4577 + chr2L 1137863 intron CG4577 + chr2L_7_1135001 chr2L_1135001 RAL-391_75b 10 chr2L 1220137 1220148 chr2L 1227602 1227613 blood 4 7466 3.0 1.5 2.2 1.2 7476 chr2L 1220137 intron CG42329 + chr2L 1223875 intron CG42329 + chr2L 1227613 intron CG42329 + chr2L_4_1220001 chr2L_1220001 RAL-391_75b 11 chr2L 1312883 1312899 chr2L 1312969 1312986 5 85 0.0 0.5 0.2 4.2 103 chr2L 1312883 intergenic not near genes chr2L 1312934 intergenic not near genes chr2L 1312986 intergenic not near genes chr2L_5_1310001 chr2L_1310001 RAL-391_75b 12 chr2L 1362547 1362557 chr2L 1362976 1362986 4 429 1.5 1.5 1.5 1.6 439 chr2L 1362547 intergenic not near genes chr2L 1362766 intergenic not near genes chr2L 1362986 intergenic not near genes chr2L_4_1360001 chr2L_1360001 RAL-391_75b 13 chr2L 1536514 1536524 chr2L 1536646 1536656 4 132 0.0 2.5 1.2 1.8 142 chr2L 1536514 intergenic not near genes chr2L 1536585 intergenic not near genes chr2L 1536656 intergenic not near genes chr2L_4_1535001 chr2L_1535001 RAL-391_75b 14 chr2L 1589005 1589018 chr2L 1589084 1589097 4 78 3.0 4.5 3.8 0.8 92 chr2L 1589005 intron haf + chr2L 1589051 intron haf + chr2L 1589097 intron haf + chr2L_4_1585001 chr2L_1585001 RAL-391_75b 15 chr2L 1744811 1744834 chr2L 1744889 1744912 4 78 0.0 3.0 1.5 1.6 101 chr2L 1744811 intron CG17646 + chr2L 1744862 intron CG17646 + chr2L 1744912 intron CG17646 + chr2L_4_1740001 chr2L_1740001 RAL-391_75b 16 chr2L 1948624 1948658 chr2L 1948731 1948764 4 107 0.0 1.5 0.8 2.2 140 chr2L 1948624 intergenic not near genes chr2L 1948694 intergenic not near genes chr2L 1948764 intergenic not near genes chr2L_4_1945001 chr2L_1945001 RAL-391_75b 17 chr2L 2100378 2100406 chr2L 2109529 2109557 roo 6 9151 2.5 2.0 2.2 1.9 9179 chr2L 2100378 intron dpr3 - chr2L 2104968 intron dpr3 - chr2L 2109557 intron dpr3 - chr2L_6_2100001 chr2L_2100001 RAL-391_75b 18 chr2L 2294039 2294069 chr2L 2299244 2299273 copia 5 5204 1.0 0.5 0.8 2.8 5234 chr2L 2294039 intergenic not near genes chr2L 2296656 intergenic not near genes chr2L 2299273 intergenic not near genes chr2L_5_2295001 chr2L_2295001 RAL-391_75b 19 chr2L 2618035 2618061 chr2L 2618114 2618140 6 79 2.0 0.0 1.0 3.0 105 chr2L 2618035 intergenic not near genes chr2L 2618088 intergenic not near genes chr2L 2618140 intergenic not near genes chr2L_6_2615001 chr2L_2615001 RAL-391_75b 20 chr2L 2667625 2667653 chr2L 2667704 2667732 5 79 1.5 1.5 1.5 2.0 107 chr2L 2667625 intergenic not near genes chr2L 2667678 intergenic not near genes chr2L 2667732 intergenic not near genes chr2L_5_2665001 chr2L_2665001 RAL-391_75b 21 chr2L 2698876 2698888 chr2L 2698963 2698975 5 87 0.0 1.5 0.8 2.8 99 chr2L 2698876 intron CG31690 + chr2L 2698926 intron CG31690 + chr2L 2698975 intron CG31690 + chr2L_5_2695001 chr2L_2695001 RAL-391_75b 22 chr2L 2937433 2937451 chr2L 2937510 2937528 4 76 0.5 1.0 0.8 2.2 95 chr2L 2937433 intron lilli + chr2L 2937480 intron lilli + chr2L 2937528 intron lilli + chr2L_4_2935001 chr2L_2935001 RAL-391_75b 23 chr2L 3108870 3108893 chr2L 3108947 3108970 6 77 0.0 0.0 0.0 6.0 100 chr2L 3108870 intron toc - chr2L 3108920 intron toc - chr2L 3108970 intron toc - chr2L_6_3105001 chr2L_3105001 RAL-391_75b 24 chr2L 3147283 3147306 chr2L 3147357 3147382 8 76 1.5 4.0 2.8 2.1 99 chr2L 3147283 3` UTR Mad - chr2L 3147332 3` UTR Mad - chr2L 3147382 3` UTR Mad - chr2L_8_3145001 chr2L_3145001 RAL-391_75b 25 chr2L 3314697 3314727 chr2L 3314773 3314804 4 77 0.5 0.5 0.5 2.7 107 chr2L 3314697 intron CG3277 + chr2L 3314750 intron CG3277 + chr2L 3314804 intron CG3277 + chr2L_4_3310001 chr2L_3310001 RAL-391_75b 26 chr2L 3393787 3393819 chr2L 3393872 3393904 9 85 1.5 1.0 1.2 4.1 117 chr2L 3393787 intergenic not near genes chr2L 3393846 intergenic not near genes chr2L 3393904 intergenic not near genes chr2L_9_3390001 chr2L_3390001 RAL-391_75b 27 chr2L 3482149 3482168 chr2L 3482239 3482258 4 90 0.5 0.5 0.5 2.7 109 chr2L 3482149 intron CG15414 - chr2L 3482204 intron CG15414 - chr2L 3482258 intron CG15414 - chr2L_4_3480001 chr2L_3480001 RAL-391_75b 28 chr2L 3649794 3649805 chr2L 3654995 3655006 copia 5 5201 0.5 2.0 1.2 2.3 5212 chr2L 3649794 intron for - chr2L 3652400 intron for - chr2L 3655006 intron for - chr2L_5_3650001 chr2L_3650001 RAL-391_75b 29 chr2L 3960573 3960595 chr2L 3960743 3960765 6 170 0.5 0.5 0.5 4.0 192 chr2L 3960573 intron fred - chr2L 3960669 intron fred - chr2L 3960765 intron fred - chr2L_6_3960001 chr2L_3960001 RAL-391_75b 30 chr2L 4013926 4013952 chr2L 4014009 4014035 4 83 1.0 1.0 1.0 2.0 109 chr2L 4013926 intergenic not near genes chr2L 4013980 intergenic not near genes chr2L 4014035 intergenic not near genes chr2L_4_4010001 chr2L_4010001 RAL-391_75b 31 chr2L 4034091 4034101 chr2L 4034479 4034489 4 388 8.0 13.0 10.5 0.3 398 chr2L 4034091 intron ed + chr2L 4034290 intron ed + chr2L 4034489 intron ed + chr2L_4_4030001 chr2L_4030001 RAL-391_75b 32 chr2L 4157356 4157370 chr2L 4157467 4157481 4 111 0.0 0.0 0.0 4.0 125 chr2L 4157356 intergenic not near genes chr2L 4157418 intergenic not near genes chr2L 4157481 intergenic not near genes chr2L_4_4155001 chr2L_4155001 RAL-391_75b 33 chr2L 4166377 4166400 chr2L 4166460 4166483 7 83 1.5 0.0 0.8 3.9 106 chr2L 4166377 intergenic Or24a - chr2L 4166430 intergenic Or24a - chr2L 4166483 intergenic Or24a - chr2L_7_4165001 chr2L_4165001 RAL-391_75b 34 chr2L 4192994 4193016 chr2L 4193075 4193097 5 81 0.5 0.0 0.2 4.2 103 chr2L 4192994 intron CG3714 - chr2L 4193046 intron CG3714 - chr2L 4193097 intron CG3714 - chr2L_5_4190001 chr2L_4190001 RAL-391_75b 35 chr2L 4232863 4232891 chr2L 4232950 4232978 9 87 3.5 1.0 2.2 2.8 115 chr2L 4232863 intergenic not near genes chr2L 4232920 intergenic not near genes chr2L 4232978 intergenic not near genes chr2L_9_4230001 chr2L_4230001 RAL-391_75b 36 chr2L 4317886 4317912 chr2L 4317964 4317990 5 78 1.0 2.5 1.8 1.8 104 chr2L 4317886 intron tutl + chr2L 4317938 intron tutl + chr2L 4317990 intron tutl + chr2L_5_4315001 chr2L_4315001 RAL-391_75b 37 chr2L 4719050 4719079 chr2L 4719172 4719201 4 122 1.0 1.5 1.2 1.8 151 chr2L 4719050 intron CG34351 + chr2L 4719126 intron CG34351 + chr2L 4719201 intron CG34351 + chr2L_4_4715001 chr2L_4715001 RAL-391_75b 38 chr2L 5117308 5117324 chr2L 5117390 5117406 6 82 0.5 1.0 0.8 3.3 98 chr2L 5117308 intron Msp300 + chr2L 5117357 intron Msp300 + chr2L 5117406 intron Msp300 + chr2L_6_5115001 chr2L_5115001 RAL-391_75b 39 chr2L 5120973 5121003 chr2L 5121067 5121097 8 94 1.5 1.0 1.2 3.6 124 chr2L 5120973 intron Msp300 + chr2L 5121035 intron Msp300 + chr2L 5121097 intron Msp300 + chr2L_8_5120001 chr2L_5120001 RAL-391_75b 40 chr2L 5242867 5242902 chr2L 5243057 5243092 8 190 1.0 2.5 1.8 2.9 225 chr2L 5242867 intron tkv - chr2L 5242980 intron tkv - chr2L 5243092 intron tkv - chr2L_8_5240001 chr2L_5240001 RAL-391_75b 41 chr2L 5242936 5242937 chr2L 16217660 16217660 6 10974724 0.0 4.5 2.2 1.9 10974724 chr2L 5242936 intron tkv - chr2L 10730298 3` UTR,5` UTR CG6443 +,CG17118 + chr2L 16217660 intergenic not near genes chr2L_6_10730001 chr2L_10730001 RAL-391_75b 42 chr2L 5516672 5516684 chr2L 5516751 5516763 4 79 0.5 1.5 1.0 2.0 91 chr2L 5516672 intergenic not near genes chr2L 5516718 intergenic not near genes chr2L 5516763 intergenic not near genes chr2L_4_5515001 chr2L_5515001 RAL-391_75b 43 chr2L 5827709 5827721 chr2L 5836717 5836728 roo 4 9008 3.5 0.5 2.0 1.3 9019 chr2L 5827709 intron TrissinR + chr2L 5832218 intron TrissinR + chr2L 5836728 intron TrissinR + chr2L_4_5830001 chr2L_5830001 RAL-391_75b 44 chr2L 5887608 5887622 chr2L 5887689 5887703 4 81 0.5 1.0 0.8 2.2 95 chr2L 5887608 3` UTR CR44577 - chr2L 5887656 3` UTR CR44577 - chr2L 5887703 3` UTR CR44577 - chr2L_4_5885001 chr2L_5885001 RAL-391_75b 45 chr2L 5930796 5930824 chr2L 5930876 5930904 5 79 2.5 0.0 1.2 2.3 108 chr2L 5930796 intron dsf + chr2L 5930850 intron dsf + chr2L 5930904 intron dsf + chr2L_5_5930001 chr2L_5930001 RAL-391_75b 46 chr2L 5944563 5944578 chr2L 5949005 5949020 4 4442 10.5 3.5 7.0 0.5 4457 chr2L 5944563 intron Gpdh + chr2L 5946792 intron Gpdh + chr2L 5949020 intergenic Gpdh +,CG9044 + chr2L_4_5945001 chr2L_5945001 RAL-391_75b 47 chr2L 5962270 5962300 chr2L 5962345 5962376 6 76 0.5 0.0 0.2 5.0 106 chr2L 5962270 intergenic not near genes chr2L 5962323 intergenic not near genes chr2L 5962376 intergenic not near genes chr2L_6_5960001 chr2L_5960001 RAL-391_75b 48 chr2L 6002438 6002469 chr2L 6002524 6002555 5 86 1.5 2.0 1.8 1.8 117 chr2L 6002438 3` UTR Tsp26A + chr2L 6002496 3` UTR Tsp26A + chr2L 6002555 3` UTR Tsp26A + chr2L_5_6000001 chr2L_6000001 RAL-391_75b 49 chr2L 6151640 6151666 chr2L 6151718 6151744 4 78 0.5 0.5 0.5 2.7 104 chr2L 6151640 intergenic Muc26B + chr2L 6151692 intergenic Muc26B + chr2L 6151744 intergenic Muc26B + chr2L_4_6150001 chr2L_6150001 RAL-391_75b 50 chr2L 6185461 6185472 chr2L 6185539 6185550 4 78 3.0 1.0 2.0 1.3 89 chr2L 6185461 intron CG34380 + chr2L 6185506 intron CG34380 + chr2L 6185550 intron CG34380 + chr2L_4_6185001 chr2L_6185001 RAL-391_75b 51 chr2L 6426870 6426886 chr2L 6445129 6445146 roo 5 18260 0.5 3.5 2.0 1.7 18276 chr2L 6426870 3` UTR CG9527 - chr2L 6436008 intron CG9527 - chr2L 6445146 exon CG9527 - chr2L_5_6435001 chr2L_6435001 RAL-391_75b 52 chr2L 6598130 6598150 chr2L 6599084 6599106 4 956 1.0 1.5 1.2 1.8 976 chr2L 6598130 intron CG11319 - chr2L 6598618 intron CG11319 - chr2L 6599106 intron CG11319 - chr2L_4_6595001 chr2L_6595001 RAL-391_75b 53 chr2L 6771993 6772009 chr2L 6772080 6772096 4 87 2.0 1.5 1.8 1.4 103 chr2L 6771993 intron CG11321 - chr2L 6772044 intron CG11321 - chr2L 6772096 intron CG11321 - chr2L_4_6770001 chr2L_6770001 RAL-391_75b 54 chr2L 6867841 6867864 chr2L 6867947 6867970 5 106 0.0 1.5 0.8 2.8 129 chr2L 6867841 intron Nha1 - chr2L 6867906 intron Nha1 - chr2L 6867970 intron Nha1 - chr2L_5_6865001 chr2L_6865001 RAL-391_75b 55 chr2L 7502737 7502766 chr2L 7502813 7502842 5 76 1.0 3.5 2.2 1.6 105 chr2L 7502737 intron RapGAP1 - chr2L 7502790 intron RapGAP1 - chr2L 7502842 intron RapGAP1 - chr2L_5_7500001 chr2L_7500001 RAL-391_75b 56 chr2L 7922748 7922773 chr2L 7922829 7922854 4 81 1.0 3.0 2.0 1.3 106 chr2L 7922748 intron Snoo - chr2L 7922801 intron Snoo - chr2L 7922854 intron Snoo - chr2L_4_7920001 chr2L_7920001 RAL-391_75b 57 chr2L 7959041 7959050 chr2L 7960452 7960461 pogo 4 1411 3.0 1.5 2.2 1.2 1420 chr2L 7959041 intron Snoo - chr2L 7959751 intron Snoo - chr2L 7960461 intron Snoo - chr2L_4_7955001 chr2L_7955001 RAL-391_75b 58 chr2L 7965655 7965678 chr2L 7965858 7965882 roo 4 203 2.0 2.0 2.0 1.3 227 chr2L 7965655 intron Snoo - chr2L 7965768 intron Snoo - chr2L 7965882 intron Snoo - chr2L_4_7965001 chr2L_7965001 RAL-391_75b 59 chr2L 8171278 8171294 chr2L 8171359 8171375 5 81 0.0 0.5 0.2 4.2 97 chr2L 8171278 intron Piezo + chr2L 8171326 intron Piezo + chr2L 8171375 intron Piezo + chr2L_5_8170001 chr2L_8170001 RAL-391_75b 60 chr2L 8271621 8271767 chr2L 8271697 8271868 4 88 0.5 0.5 0.5 2.7 247 chr2L 8271621 intron Btk29A - chr2L 8271744 intron Btk29A - chr2L 8271868 intron Btk29A - chr2L_4_8270001 chr2L_8270001 RAL-391_75b 61 chr2L 8452420 8452435 chr2L 8461591 8461606 roo 4 9171 3.0 1.5 2.2 1.2 9186 chr2L 8452420 intron fu12 - chr2L 8457013 intron fu12 - chr2L 8461606 intron fu12 - chr2L_4_8455001 chr2L_8455001 RAL-391_75b 62 chr2L 8612816 8612841 chr2L 8613041 8613066 7 225 0.5 4.0 2.2 2.2 250 chr2L 8612816 intron Sema-1a + chr2L 8612941 intron Sema-1a + chr2L 8613066 intron Sema-1a + chr2L_7_8610001 chr2L_8610001 RAL-391_75b 63 chr2L 8939668 8939701 chr2L 8939748 8939781 5 80 0.5 0.5 0.5 3.3 113 chr2L 8939668 3` UTR Tsp29Fb + chr2L 8939724 3` UTR Tsp29Fb + chr2L 8939781 intergenic CG9510 -,Tsp29Fb + chr2L_5_8935001 chr2L_8935001 RAL-391_75b 64 chr2L 9000283 9000305 chr2L 9007793 9007814 roo 4 7510 1.5 0.5 1.0 2.0 7531 chr2L 9000283 intergenic Try29F + chr2L 9004048 intergenic not near genes chr2L 9007814 intergenic not near genes chr2L_4_9000001 chr2L_9000001 RAL-391_75b 65 chr2L 9025818 9025854 chr2L 9025902 9025938 7 84 1.0 1.0 1.0 3.5 120 chr2L 9025818 intron,3` UTR CG9582 -,CR44352 - chr2L 9025878 intron,3` UTR CG9582 -,CR44352 - chr2L 9025938 intron,3` UTR CG9582 -,CR44352 - chr2L_7_9025001 chr2L_9025001 RAL-391_75b 66 chr2L 9084339 9084340 chr2L 16217660 16217660 8 7133321 8.0 4.5 6.2 1.1 7133321 chr2L 9084339 intron Toll-4 + chr2L 12651000 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_8_12650001 chr2L_12650001 RAL-391_75b 67 chr2L 9287345 9287357 chr2L 9287442 9287454 5 97 1.0 3.5 2.2 1.6 109 chr2L 9287345 intron Ggamma30A + chr2L 9287400 intron Ggamma30A + chr2L 9287454 intron Ggamma30A + chr2L_5_9285001 chr2L_9285001 RAL-391_75b 68 chr2L 9490528 9490549 chr2L 9490608 9490629 6 80 1.0 2.5 1.8 2.1 101 chr2L 9490528 intergenic not near genes chr2L 9490578 intergenic not near genes chr2L 9490629 intergenic not near genes chr2L_6_9490001 chr2L_9490001 RAL-391_75b 69 chr2L 9837433 9837446 chr2L 9837511 9837523 4 78 0.5 1.0 0.8 2.2 90 chr2L 9837433 intron nAChRalpha6 - chr2L 9837478 intron nAChRalpha6 - chr2L 9837523 intron nAChRalpha6 - chr2L_4_9835001 chr2L_9835001 RAL-391_75b 70 chr2L 9973730 9973758 chr2L 9980849 9980877 HMS-Beagle 7 7118 0.0 0.5 0.2 5.8 7147 chr2L 9973730 intergenic not near genes chr2L 9977304 intergenic not near genes chr2L 9980877 intergenic not near genes chr2L_7_9975001 chr2L_9975001 RAL-391_75b 71 chr2L 9986354 9986376 chr2L 9986449 9986471 4 95 0.5 1.5 1.0 2.0 117 chr2L 9986354 intron bib + chr2L 9986412 intron bib + chr2L 9986471 intron bib + chr2L_4_9985001 chr2L_9985001 RAL-391_75b 72 chr2L 10078122 10078147 chr2L 10078280 10078296 4 156 1.5 0.5 1.0 2.0 174 chr2L 10078122 intron CG44153 - chr2L 10078209 intron CG44153 - chr2L 10078296 intron CG44153 - chr2L_4_10075001 chr2L_10075001 RAL-391_75b 73 chr2L 10156328 10156347 chr2L 10163798 10163817 blood 5 7470 2.0 0.0 1.0 2.5 7489 chr2L 10156328 intron,3` UTR CG44153 -,CG4839 + chr2L 10160072 intron CG44153 - chr2L 10163817 intron CG44153 - chr2L_5_10160001 chr2L_10160001 RAL-391_75b 74 chr2L 10580793 10580816 chr2L 10580874 10580897 6 81 1.5 1.0 1.2 2.7 104 chr2L 10580793 intron Trim9 + chr2L 10580845 intron Trim9 + chr2L 10580897 intron Trim9 + chr2L_6_10580001 chr2L_10580001 RAL-391_75b 75 chr2L 10592843 10592873 chr2L 10600505 10600535 opus 4 7662 2.0 0.5 1.2 1.8 7692 chr2L 10592843 intron Trim9 + chr2L 10596689 intron Trim9 + chr2L 10600535 intron Trim9 + chr2L_4_10595001 chr2L_10595001 RAL-391_75b 76 chr2L 10862837 10862876 chr2L 10864451 10864490 Rt1c 7 1614 2.5 3.5 3.0 1.8 1653 chr2L 10862837 3` UTR CR43807 - chr2L 10863664 intron CR43807 - chr2L 10864490 3` UTR CR43807 - chr2L_7_10860001 chr2L_10860001 RAL-391_75b 77 chr2L 10946950 10946977 chr2L 10956165 10956192 roo 5 9215 1.5 0.5 1.0 2.5 9242 chr2L 10946950 intron dpr2 - chr2L 10951571 intron dpr2 - chr2L 10956192 intron dpr2 - chr2L_5_10950001 chr2L_10950001 RAL-391_75b 78 chr2L 11224066 11224090 chr2L 11224177 11224201 7 111 0.5 1.5 1.0 3.5 135 chr2L 11224066 intron ab + chr2L 11224134 intron ab + chr2L 11224201 intron ab + chr2L_7_11220001 chr2L_11220001 RAL-391_75b 79 chr2L 11672137 11672167 chr2L 11672244 11672274 4 107 1.5 0.5 1.0 2.0 137 chr2L 11672137 intergenic not near genes chr2L 11672206 intergenic not near genes chr2L 11672274 intergenic not near genes chr2L_4_11670001 chr2L_11670001 RAL-391_75b 80 chr2L 11713510 11713520 chr2L 11720978 11720988 blood 4 7468 1.0 0.5 0.8 2.2 7478 chr2L 11713510 intergenic not near genes chr2L 11717249 intergenic not near genes chr2L 11720988 intergenic CR44143 + chr2L_4_11715001 chr2L_11715001 RAL-391_75b 81 chr2L 11770606 11770617 chr2L 11770693 11770704 5 87 1.0 0.0 0.5 3.3 98 chr2L 11770606 intergenic not near genes chr2L 11770655 intergenic not near genes chr2L 11770704 intergenic not near genes chr2L_5_11770001 chr2L_11770001 RAL-391_75b 82 chr2L 11841368 11841398 chr2L 11841446 11841476 4 78 0.5 0.5 0.5 2.7 108 chr2L 11841368 intron Pde1c - chr2L 11841422 intron Pde1c - chr2L 11841476 intron Pde1c - chr2L_4_11840001 chr2L_11840001 RAL-391_75b 83 chr2L 12283571 12283582 chr2L 12283650 12283661 4 79 1.5 0.0 0.8 2.2 90 chr2L 12283571 intron aret + chr2L 12283616 intron aret + chr2L 12283661 intron aret + chr2L_4_12280001 chr2L_12280001 RAL-391_75b 84 chr2L 12314448 12314470 chr2L 12314540 12314560 4 91 3.0 2.5 2.8 1.1 112 chr2L 12314448 intergenic not near genes chr2L 12314504 intergenic not near genes chr2L 12314560 intergenic not near genes chr2L_4_12310001 chr2L_12310001 RAL-391_75b 85 chr2L 12365769 12365787 chr2L 12365922 12365941 4 154 1.5 0.0 0.8 2.2 172 chr2L 12365769 intron bru-2 + chr2L 12365855 intron bru-2 + chr2L 12365941 intron bru-2 + chr2L_4_12365001 chr2L_12365001 RAL-391_75b 86 chr2L 12487885 12487908 chr2L 12487966 12487988 8 80 2.0 2.0 2.0 2.7 103 chr2L 12487885 intron bun - chr2L 12487936 intron bun - chr2L 12487988 intron bun - chr2L_8_12485001 chr2L_12485001 RAL-391_75b 87 chr2L 12680912 12680934 chr2L 12680992 12681014 5 80 2.0 0.5 1.2 2.3 102 chr2L 12680912 intron pdm2 + chr2L 12680963 intron pdm2 + chr2L 12681014 intron pdm2 + chr2L_5_12680001 chr2L_12680001 RAL-391_75b 88 chr2L 12759214 12759231 chr2L 12759308 12759326 4 95 0.0 1.0 0.5 2.7 112 chr2L 12759214 intergenic not near genes chr2L 12759270 intergenic not near genes chr2L 12759326 intergenic not near genes chr2L_4_12755001 chr2L_12755001 RAL-391_75b 89 chr2L 12791607 12791617 chr2L 12795281 12795289 F-element 4 3674 2.0 1.5 1.8 1.4 3682 chr2L 12791607 intergenic not near genes chr2L 12793448 intergenic not near genes chr2L 12795289 intergenic not near genes chr2L_4_12790001 chr2L_12790001 RAL-391_75b 90 chr2L 12894021 12894046 chr2L 12895488 12895513 hobo 6 1466 0.0 0.0 0.0 6.0 1492 chr2L 12894021 intergenic not near genes chr2L 12894767 intergenic not near genes chr2L 12895513 intergenic not near genes chr2L_6_12890001 chr2L_12890001 RAL-391_75b 91 chr2L 13369311 13369336 chr2L 13369388 13369413 4 77 0.5 2.0 1.2 1.8 102 chr2L 13369311 5` UTR CG31855 + chr2L 13369362 5` UTR CG31855 + chr2L 13369413 exon CG31855 + chr2L_4_13365001 chr2L_13365001 RAL-391_75b 92 chr2L 13435445 13435464 chr2L 13435547 13435572 4 106 0.5 0.5 0.5 2.7 127 chr2L 13435445 intron CG42784 + chr2L 13435508 intron CG42784 + chr2L 13435572 intron CG42784 + chr2L_4_13435001 chr2L_13435001 RAL-391_75b 93 chr2L 13558816 13558841 chr2L 13558906 13558931 4 90 0.5 1.0 0.8 2.2 115 chr2L 13558816 exon kuz + chr2L 13558874 intron kuz + chr2L 13558931 intron kuz + chr2L_4_13555001 chr2L_13555001 RAL-391_75b 94 chr2L 14374781 14374802 chr2L 14374872 14374893 4 91 0.0 1.0 0.5 2.7 112 chr2L 14374781 intergenic not near genes chr2L 14374837 intergenic not near genes chr2L 14374893 intergenic not near genes chr2L_4_14370001 chr2L_14370001 RAL-391_75b 95 chr2L 14564196 14564230 chr2L 14564272 14564306 7 76 1.5 2.0 1.8 2.5 110 chr2L 14564196 intergenic CG3473 - chr2L 14564251 intergenic not near genes chr2L 14564306 intergenic not near genes chr2L_7_14560001 chr2L_14560001 RAL-391_75b 96 chr2L 14569662 14569688 chr2L 14569751 14569774 8 88 2.5 0.0 1.2 3.6 112 chr2L 14569662 intergenic not near genes chr2L 14569718 intergenic not near genes chr2L 14569774 intergenic not near genes chr2L_8_14565001 chr2L_14565001 RAL-391_75b 97 chr2L 14588387 14588408 chr2L 14588541 14588561 7 154 2.0 1.0 1.5 2.8 174 chr2L 14588387 intergenic CG42680 - chr2L 14588474 intergenic CG42680 - chr2L 14588561 intergenic CG42680 - chr2L_7_14585001 chr2L_14585001 RAL-391_75b 98 chr2L 14657017 14657045 chr2L 14657096 14657124 5 79 3.5 1.5 2.5 1.4 107 chr2L 14657017 intron osp - chr2L 14657070 intron osp - chr2L 14657124 intron osp - chr2L_5_14655001 chr2L_14655001 RAL-391_75b 99 chr2L 14762146 14762172 chr2L 14762396 14762422 4 250 1.0 3.0 2.0 1.3 276 chr2L 14762146 5` UTR CR44858 + chr2L 14762284 5` UTR CR44858 + chr2L 14762422 5` UTR CR44858 + chr2L_4_14760001 chr2L_14760001 RAL-391_75b 100 chr2L 15031551 15031580 chr2L 15031791 15031820 6 240 2.0 0.5 1.2 2.7 269 chr2L 15031551 intron,exon GABA-B-R1 +,CG31832 - chr2L 15031686 intron,exon GABA-B-R1 +,CG31832 - chr2L 15031820 intron GABA-B-R1 + chr2L_6_15030001 chr2L_15030001 RAL-391_75b 101 chr2L 15068916 15068927 chr2L 15068995 15069006 4 79 2.5 2.0 2.2 1.2 90 chr2L 15068916 intron,intron vas +,vig - chr2L 15068961 intron,intron vas +,vig - chr2L 15069006 intron,intron vas +,vig - chr2L_4_15065001 chr2L_15065001 RAL-391_75b 102 chr2L 15109190 15109210 chr2L 15109286 15109306 4 96 4.0 2.0 3.0 1.0 116 chr2L 15109190 intergenic CG15269 + chr2L 15109248 intergenic CG15269 + chr2L 15109306 intergenic CG15269 + chr2L_4_15105001 chr2L_15105001 RAL-391_75b 103 chr2L 15196736 15196762 chr2L 15196820 15196846 7 84 1.5 1.5 1.5 2.8 110 chr2L 15196736 intron CG4168 - chr2L 15196791 intron CG4168 - chr2L 15196846 intron CG4168 - chr2L_7_15195001 chr2L_15195001 RAL-391_75b 104 chr2L 15204842 15204868 chr2L 15204984 15205010 5 142 0.5 0.0 0.2 4.2 168 chr2L 15204842 intergenic not near genes chr2L 15204926 intergenic not near genes chr2L 15205010 intergenic not near genes chr2L_5_15200001 chr2L_15200001 RAL-391_75b 105 chr2L 15350912 15350927 chr2L 15350996 15351011 4 84 1.5 1.5 1.5 1.6 99 chr2L 15350912 intergenic not near genes chr2L 15350962 intergenic not near genes chr2L 15351011 intergenic not near genes chr2L_4_15350001 chr2L_15350001 RAL-391_75b 106 chr2L 15355713 15355742 chr2L 15355791 15355820 4 78 0.5 1.5 1.0 2.0 107 chr2L 15355713 intergenic not near genes chr2L 15355766 intergenic not near genes chr2L 15355820 intergenic not near genes chr2L_4_15355001 chr2L_15355001 RAL-391_75b 107 chr2L 15446053 15446075 chr2L 15453522 15453543 blood 4 7469 2.5 0.0 1.2 1.8 7490 chr2L 15446053 intergenic not near genes chr2L 15449798 intergenic not near genes chr2L 15453543 intergenic not near genes chr2L_4_15445001 chr2L_15445001 RAL-391_75b 108 chr2L 15482578 15482605 chr2L 15482714 15482740 4 136 0.5 1.0 0.8 2.2 162 chr2L 15482578 intergenic not near genes chr2L 15482659 intergenic not near genes chr2L 15482740 intergenic not near genes chr2L_4_15480001 chr2L_15480001 RAL-391_75b 109 chr2L 15495046 15495077 chr2L 15495124 15495155 4 78 2.5 1.0 1.8 1.4 109 chr2L 15495046 intergenic not near genes chr2L 15495100 intergenic not near genes chr2L 15495155 intergenic not near genes chr2L_4_15495001 chr2L_15495001 RAL-391_75b 110 chr2L 15906182 15906203 chr2L 15906271 15906292 4 89 1.0 1.5 1.2 1.8 110 chr2L 15906182 intron beat-Ib - chr2L 15906237 intron beat-Ib - chr2L 15906292 intron beat-Ib - chr2L_4_15905001 chr2L_15905001 RAL-391_75b 111 chr2L 9084339 9084340 chr2L 16217660 16217660 5 7133321 8.0 4.5 6.2 0.7 7133321 chr2L 9084339 intron Toll-4 + chr2L 12651000 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_5_12650001 chr2L_12650001 RAL-391_75b 112 chr2L 16217660 16217660 chr2L 18622718 18622719 5 2405059 3.5 9.5 6.5 0.7 2405059 chr2L 16217660 intergenic not near genes chr2L 17420190 intron Dif - chr2L 18622719 intron MESR3 + chr2L_5_17420001 chr2L_17420001 RAL-391_75b 113 chr2L 16280260 16280284 chr2L 16281430 16281455 1360 6 1170 3.0 3.0 3.0 1.5 1195 chr2L 16280260 intron crp - chr2L 16280858 intron crp - chr2L 16281455 intron crp - chr2L_6_16280001 chr2L_16280001 RAL-391_75b 114 chr2L 16841020 16841043 chr2L 16841096 16841119 4 76 0.5 0.0 0.2 3.3 99 chr2L 16841020 intron,intron SclA +,SclB + chr2L 16841070 intron,intron SclA +,SclB + chr2L 16841119 intron,intron SclA +,SclB + chr2L_4_16840001 chr2L_16840001 RAL-391_75b 115 chr2L 16850553 16850581 chr2L 16850650 16850678 6 97 0.5 0.5 0.5 4.0 125 chr2L 16850553 intron CG31810 - chr2L 16850616 intron CG31810 - chr2L 16850678 intron CG31810 - chr2L_6_16850001 chr2L_16850001 RAL-391_75b 116 chr2L 16870110 16870143 chr2L 16870509 16870542 6 399 0.5 0.5 0.5 4.0 432 chr2L 16870110 5` UTR CR31781 + chr2L 16870326 5` UTR CR31781 + chr2L 16870542 5` UTR CR31781 + chr2L_6_16870001 chr2L_16870001 RAL-391_75b 117 chr2L 17432018 17432049 chr2L 17432125 17432156 1360 5 107 0.0 0.0 0.0 5.0 138 chr2L 17432018 intron Dif - chr2L 17432087 intron Dif - chr2L 17432156 intron Dif - chr2L_5_17430001 chr2L_17430001 RAL-391_75b 118 chr2L 17694615 17694625 chr2L 17694739 17694749 5 124 1.0 1.0 1.0 2.5 134 chr2L 17694615 intron CadN - chr2L 17694682 intron CadN - chr2L 17694749 intron CadN - chr2L_5_17690001 chr2L_17690001 RAL-391_75b 119 chr2L 17911966 17911988 chr2L 17914144 17914166 pogo 4 2178 1.0 2.0 1.5 1.6 2200 chr2L 17911966 intergenic not near genes chr2L 17913066 intergenic not near genes chr2L 17914166 intergenic CG43271 - chr2L_4_17910001 chr2L_17910001 RAL-391_75b 120 chr2L 17951950 17951978 chr2L 17953417 17953445 hobo 4 1467 1.0 2.0 1.5 1.6 1495 chr2L 17951950 intergenic CR44398 -,CR44397 - chr2L 17952698 intergenic not near genes chr2L 17953445 intergenic not near genes chr2L_4_17950001 chr2L_17950001 RAL-391_75b 121 chr2L 18039880 18039901 chr2L 18039961 18039982 4 81 0.5 0.5 0.5 2.7 102 chr2L 18039880 intron rdo + chr2L 18039931 intron rdo + chr2L 18039982 intron rdo + chr2L_4_18035001 chr2L_18035001 RAL-391_75b 122 chr2L 18111246 18111258 chr2L 18111336 18111348 4 90 1.0 1.5 1.2 1.8 102 chr2L 18111246 intergenic not near genes chr2L 18111297 intergenic not near genes chr2L 18111348 intergenic not near genes chr2L_4_18110001 chr2L_18110001 RAL-391_75b 123 chr2L 18153173 18153199 chr2L 18153397 18153421 4 224 0.0 0.5 0.2 3.3 248 chr2L 18153173 5` UTR CG17681 + chr2L 18153297 5` UTR CG17681 + chr2L 18153421 exon CG17681 + chr2L_4_18150001 chr2L_18150001 RAL-391_75b 124 chr2L 18197479 18197505 chr2L 18197558 18197584 8 79 0.5 2.0 1.2 3.6 105 chr2L 18197479 intron CG42750 - chr2L 18197532 intron CG42750 - chr2L 18197584 intron CG42750 - chr2L_8_18195001 chr2L_18195001 RAL-391_75b 125 chr2L 16217660 16217660 chr2L 18622718 18622719 9 2405058 3.5 9.5 6.5 1.2 2405059 chr2L 16217660 intergenic not near genes chr2L 17420190 intron Dif - chr2L 18622719 intron MESR3 + chr2L_9_17420001 chr2L_17420001 RAL-391_75b 126 chr2L 18790285 18790310 chr2L 18791105 18791130 8 820 7.5 7.5 7.5 0.9 845 chr2L 18790285 intron ham - chr2L 18790708 intron ham - chr2L 18791130 intron ham - chr2L_8_18790001 chr2L_18790001 RAL-391_75b 127 chr2L 18883853 18883878 chr2L 18883935 18883960 5 82 0.0 2.0 1.0 2.5 107 chr2L 18883853 intergenic not near genes chr2L 18883906 intergenic not near genes chr2L 18883960 intergenic not near genes chr2L_5_18880001 chr2L_18880001 RAL-391_75b 128 chr2L 18981398 18981421 chr2L 18981481 18981504 5 83 1.0 3.5 2.2 1.6 106 chr2L 18981398 intron Swip-1 - chr2L 18981451 intron Swip-1 - chr2L 18981504 intron Swip-1 - chr2L_5_18980001 chr2L_18980001 RAL-391_75b 129 chr2L 19189968 19190001 chr2L 19190122 19190154 4 153 1.0 0.5 0.8 2.2 186 chr2L 19189968 intergenic pigeon +,drl + chr2L 19190061 intergenic pigeon +,drl + chr2L 19190154 intergenic drl +,pigeon + chr2L_4_19190001 chr2L_19190001 RAL-391_75b 130 chr2L 19267978 19268010 chr2L 19268056 19268088 4 78 1.5 2.0 1.8 1.4 110 chr2L 19267978 intergenic not near genes chr2L 19268033 intergenic not near genes chr2L 19268088 intergenic not near genes chr2L_4_19265001 chr2L_19265001 RAL-391_75b 131 chr2L 19357548 19357562 chr2L 19357638 19357652 5 90 1.0 3.0 2.0 1.7 104 chr2L 19357548 intron dnt - chr2L 19357600 intron dnt - chr2L 19357652 intron dnt - chr2L_5_19355001 chr2L_19355001 RAL-391_75b 132 chr2L 19620100 19620125 chr2L 19621089 19621113 jockey 5 989 2.5 3.5 3.0 1.2 1013 chr2L 19620100 intron Lar + chr2L 19620606 intron Lar + chr2L 19621113 intron Lar + chr2L_5_19620001 chr2L_19620001 RAL-391_75b 133 chr2L 19703536 19703560 chr2L 19712672 19712696 roo 7 9136 5.5 1.0 3.2 1.7 9160 chr2L 19703536 intron Lar + chr2L 19708116 intron Lar + chr2L 19712696 intron Lar + chr2L_7_19705001 chr2L_19705001 RAL-391_75b 134 chr2L 19762814 19762837 chr2L 19763056 19763079 pogo 4 242 0.5 0.5 0.5 2.7 265 chr2L 19762814 5` UTR fbp - chr2L 19762946 intron fbp - chr2L 19763079 intron fbp - chr2L_4_19760001 chr2L_19760001 RAL-391_75b 135 chr2L 19871553 19871574 chr2L 19871640 19871660 5 87 0.0 2.5 1.2 2.3 107 chr2L 19871553 intron sick + chr2L 19871606 intron sick + chr2L 19871660 intron sick + chr2L_5_19870001 chr2L_19870001 RAL-391_75b 136 chr2L 19900699 19900703 chr2L 19900783 19900788 4 84 2.0 0.5 1.2 1.8 89 chr2L 19900699 intron sick + chr2L 19900744 intron sick + chr2L 19900788 intron sick + chr2L_4_19900001 chr2L_19900001 RAL-391_75b 137 chr2L 20005870 20005896 chr2L 20010946 20010971 flea 4 5075 2.0 2.0 2.0 1.3 5101 chr2L 20005870 intron CG43861 - chr2L 20008420 intron CG43861 - chr2L 20010971 intron CG43861 - chr2L_4_20005001 chr2L_20005001 RAL-391_75b 138 chr2L 20041432 20041462 chr2L 20041517 20041547 5 85 3.5 3.5 3.5 1.1 115 chr2L 20041432 intron sNPF + chr2L 20041490 intron sNPF + chr2L 20041547 intron sNPF + chr2L_5_20040001 chr2L_20040001 RAL-391_75b 139 chr2L 20254548 20254560 chr2L 20254838 20254850 5 290 2.5 3.0 2.8 1.3 302 chr2L 20254548 intergenic CR40465 - chr2L 20254699 intergenic CR40465 - chr2L 20254850 intergenic CR40465 - chr2L_5_20250001 chr2L_20250001 RAL-391_75b 140 chr2L 20272116 20272141 chr2L 20282827 20282852 copia 6 10711 1.5 1.0 1.2 2.7 10736 chr2L 20272116 intergenic not near genes chr2L 20277484 intergenic not near genes chr2L 20282852 intergenic not near genes chr2L_6_20275001 chr2L_20275001 RAL-391_75b 141 chr2L 20576220 20576248 chr2L 20583688 20583715 blood 4 7468 0.5 0.0 0.2 3.3 7495 chr2L 20576220 intergenic CR45347 + chr2L 20579968 intergenic not near genes chr2L 20583715 3` UTR CR44909 - chr2L_4_20575001 chr2L_20575001 RAL-391_75b 142 chr2L 20600662 20600678 chr2L 20600861 20600877 5 199 1.0 0.0 0.5 3.3 215 chr2L 20600662 intron CR44909 - chr2L 20600770 intron CR44909 - chr2L 20600877 intron CR44909 - chr2L_5_20600001 chr2L_20600001 RAL-391_75b 143 chr2L 20618193 20618220 chr2L 20618396 20618423 4 203 1.0 1.5 1.2 1.8 230 chr2L 20618193 intron CR44909 - chr2L 20618308 intron CR44909 - chr2L 20618423 intron,3` UTR CR44909 -,mir-288 - chr2L_4_20615001 chr2L_20615001 RAL-391_75b 144 chr2L 20639512 20639530 chr2L 20639788 20639805 INE-1 6 276 2.0 4.0 3.0 1.5 293 chr2L 20639512 intergenic not near genes chr2L 20639658 intergenic CG31680 + chr2L 20639805 intergenic CG31680 + chr2L_6_20635001 chr2L_20635001 RAL-391_75b 145 chr2L 20818516 20818524 chr2L 20818597 20818605 6 80 2.5 1.0 1.8 2.1 89 chr2L 20818516 exon CheB38a - chr2L 20818560 intergenic CheB38a - chr2L 20818605 intergenic CheB38a - chr2L_6_20815001 chr2L_20815001 RAL-391_75b 146 chr2L 20976650 20976670 chr2L 20981465 20981485 X-element 4 4815 1.0 2.5 1.8 1.4 4835 chr2L 20976650 intron CG42238 - chr2L 20979068 intron CG42238 - chr2L 20981485 intron CG42238 - chr2L_4_20975001 chr2L_20975001 RAL-391_75b 147 chr2L 20986903 20986935 chr2L 20987240 20987272 8 337 0.0 2.5 1.2 3.6 369 chr2L 20986903 intron CG42238 - chr2L 20987088 intron CG42238 - chr2L 20987272 intron CG42238 - chr2L_8_20985001 chr2L_20985001 RAL-391_75b 148 chr2L 20998942 20998950 chr2L 20999019 20999027 4 77 1.0 1.0 1.0 2.0 85 chr2L 20998942 intron CG42238 - chr2L 20998984 intron CG42238 - chr2L 20999027 intron CG42238 - chr2L_4_20995001 chr2L_20995001 RAL-391_75b 149 chr2L 21020271 21020310 chr2L 21023948 21023987 NOF 7 3677 0.0 2.5 1.2 3.2 3716 chr2L 21020271 intron CG42238 - chr2L 21022129 intron CG42238 - chr2L 21023987 intron CG42238 - chr2L_7_21020001 chr2L_21020001 RAL-391_75b 150 chr2L 21041143 21041156 chr2L 21049404 21049417 Tirant 4 8261 2.5 1.5 2.0 1.3 8274 chr2L 21041143 intron CG42238 - chr2L 21045280 intron CG42238 - chr2L 21049417 intron CG42238 - chr2L_4_21045001 chr2L_21045001 RAL-391_75b 151 chr2L 21232988 21233269 chr2L 21233065 21233091 4 103 7.0 3.5 5.2 0.6 103 chr2L 21232988 exon,5` UTR CG31626 -,CR45713 + chr2L 21233040 exon,5` UTR CG31626 -,CR45713 + chr2L 21233091 exon,5` UTR CG31626 -,CR45713 + chr2L_4_21230001 chr2L_21230001 RAL-391_75b 152 chr2L 21233962 21233996 chr2L 21234059 21234093 5 97 0.0 0.5 0.2 4.2 131 chr2L 21233962 intron,5` UTR CG31626 -,CR45713 + chr2L 21234028 intron,5` UTR CG31626 -,CR45713 + chr2L 21234093 intron CG31626 - chr2L_5_21230001 chr2L_21230001 RAL-391_75b 153 chr2L 21755495 21755522 chr2L 21755619 21755646 5 124 0.5 1.0 0.8 2.8 151 chr2L 21755495 intron step - chr2L 21755570 intron step - chr2L 21755646 intron step - chr2L_5_21755001 chr2L_21755001 RAL-391_75b 154 chr2L 21859328 21859347 chr2L 21859408 21859427 6 78 1.0 2.5 1.8 2.1 99 chr2L 21859328 intron CR44917 + chr2L 21859378 intron CR44917 + chr2L 21859427 intron CR44917 + chr2L_6_21855001 chr2L_21855001 RAL-391_75b 155 chr2L 21898843 21898870 chr2L 21898971 21898997 9 127 1.5 2.0 1.8 3.2 154 chr2L 21898843 intergenic not near genes chr2L 21898920 intergenic not near genes chr2L 21898997 intergenic not near genes chr2L_9_21895001 chr2L_21895001 RAL-391_75b 156 chr2L 21981691 21981707 chr2L 21990856 21990872 roo 5 9165 1.5 0.5 1.0 2.5 9181 chr2L 21981691 exon CG2528 - chr2L 21986282 intron CG2528 - chr2L 21990872 exon CG2528 - chr2L_5_21985001 chr2L_21985001 RAL-391_75b 157 chr2L 21997578 21997599 chr2L 21997785 21997806 5 207 0.0 1.0 0.5 3.3 228 chr2L 21997578 intergenic not near genes chr2L 21997692 intergenic not near genes chr2L 21997806 intergenic not near genes chr2L_5_21995001 chr2L_21995001 RAL-391_75b 158 chr2L 22179551 22179574 chr2L 22179628 22179651 4 77 1.0 3.0 2.0 1.3 100 chr2L 22179551 intron CG3635 + chr2L 22179601 intron CG3635 + chr2L 22179651 intron CG3635 + chr2L_4_22175001 chr2L_22175001 RAL-391_75b 159 chr2L 22446019 22446028 chr2L 22506892 22506901 HMS-Beagle 4 60873 3.0 9.0 6.0 0.6 60882 chr2L 22446019 intergenic not near genes chr2L 22476460 intergenic not near genes chr2L 22506901 intergenic not near genes chr2L_4_22475001 chr2L_22475001 RAL-391_75b 160 chr2L 22490513 22490524 chr2L 22497649 22497659 springer 4 7136 0.0 0.0 0.0 4.0 7146 chr2L 22490513 intergenic not near genes chr2L 22494086 intergenic not near genes chr2L 22497659 intergenic not near genes chr2L_4_22490001 chr2L_22490001 RAL-391_75b 161 chr2L 22548926 22548944 chr2L 22550151 22550169 1360 4 1225 0.0 2.5 1.2 1.8 1243 chr2L 22548926 intergenic CG17490 + chr2L 22549548 intergenic not near genes chr2L 22550169 intergenic CG17493 + chr2L_4_22545001 chr2L_22545001 RAL-391_75b 162 chr2L 22600111 22600119 chr2L 22600218 22600226 4 107 2.0 2.5 2.2 1.2 115 chr2L 22600111 intergenic not near genes chr2L 22600168 intergenic not near genes chr2L 22600226 intergenic not near genes chr2L_4_22600001 chr2L_22600001 RAL-391_75b 163 chr2R 469956 469979 chr2R 473196 473220 F-element 5 3240 2.5 0.0 1.2 2.3 3264 chr2R 469956 intergenic not near genes chr2R 471588 intergenic not near genes chr2R 473220 intergenic not near genes chr2R_5_470001 chr2R_470001 RAL-391_75b 164 chr2R 552757 552787 chr2R 553975 554005 1360 5 1218 6.0 11.0 8.5 0.5 1248 chr2R 552757 intron CG40378 + chr2R 553381 intron CG40378 + chr2R 554005 intron CG40378 + chr2R_5_550001 chr2R_550001 RAL-391_75b 165 chr2R 2498983 2499007 chr2R 2508130 2508154 roo 5 9147 1.0 1.0 1.0 2.5 9171 chr2R 2498983 intron MFS17 - chr2R 2503568 intron MFS17 - chr2R 2508154 intron MFS17 - chr2R_5_2500001 chr2R_2500001 RAL-391_75b 166 chr2R 3927688 3927708 chr2R 3927785 3927805 5 97 2.0 1.5 1.8 1.8 117 chr2R 3927688 intron uex - chr2R 3927746 intron uex - chr2R 3927805 intron uex - chr2R_5_3925001 chr2R_3925001 RAL-391_75b 167 chr2R 4350778 4350795 chr2R 4350858 4350875 4 80 0.5 0.5 0.5 2.7 97 chr2R 4350778 intron Gprk1 - chr2R 4350826 intron Gprk1 - chr2R 4350875 intron Gprk1 - chr2R_4_4350001 chr2R_4350001 RAL-391_75b 168 chr2R 4622950 4622987 chr2R 4624109 4624146 1360 5 1159 0.0 2.5 1.2 2.3 1196 chr2R 4622950 intergenic CR44101 - chr2R 4623548 intergenic not near genes chr2R 4624146 intergenic not near genes chr2R_5_4620001 chr2R_4620001 RAL-391_75b 169 chr2R 5125252 5125276 chr2R 5125570 5125594 4 318 0.0 0.5 0.2 3.3 342 chr2R 5125252 intron gus - chr2R 5125423 intron gus - chr2R 5125594 intron gus - chr2R_4_5125001 chr2R_5125001 RAL-391_75b 170 chr2R 5256760 5256787 chr2R 5256848 5256875 10 88 3.5 2.5 3.0 2.5 115 chr2R 5256760 intergenic not near genes chr2R 5256818 intergenic not near genes chr2R 5256875 intergenic not near genes chr2R_10_5255001 chr2R_5255001 RAL-391_75b 171 chr2R 5421538 5421555 chr2R 5421620 5421639 4 83 8.0 7.5 7.8 0.5 101 chr2R 5421538 intron laccase2 + chr2R 5421588 intron laccase2 + chr2R 5421639 intron laccase2 + chr2R_4_5420001 chr2R_5420001 RAL-391_75b 172 chr2R 5491662 5491694 chr2R 5491766 5491787 4 96 1.0 2.0 1.5 1.6 125 chr2R 5491662 intron CG30440 - chr2R 5491724 intron CG30440 - chr2R 5491787 intron CG30440 - chr2R_4_5490001 chr2R_5490001 RAL-391_75b 173 chr2R 5772530 5772539 chr2R 5772624 5772633 4 94 1.5 0.0 0.8 2.2 103 chr2R 5772530 3` UTR Gp210 + chr2R 5772582 3` UTR Gp210 + chr2R 5772633 3` UTR Gp210 + chr2R_4_5770001 chr2R_5770001 RAL-391_75b 174 chr2R 6096714 6096752 chr2R 6101912 6101950 BS 10 5198 0.0 2.5 1.2 4.5 5236 chr2R 6096714 intron EcR - chr2R 6099332 intron EcR - chr2R 6101950 intron EcR - chr2R_10_6095001 chr2R_6095001 RAL-391_75b 175 chr2R 6865375 6865395 chr2R 6865459 6865479 4 84 3.0 1.5 2.2 1.2 104 chr2R 6865375 intron coro - chr2R 6865427 intron coro - chr2R 6865479 intron coro - chr2R_4_6865001 chr2R_6865001 RAL-391_75b 176 chr2R 6866186 6866214 chr2R 6866283 6866311 5 97 0.5 2.0 1.2 2.3 125 chr2R 6866186 intron coro - chr2R 6866248 intron coro - chr2R 6866311 intron coro - chr2R_5_6865001 chr2R_6865001 RAL-391_75b 177 chr2R 6886544 6886578 chr2R 6886761 6886795 6 217 2.5 2.0 2.2 1.9 251 chr2R 6886544 5` UTR Spn42De + chr2R 6886670 exon Spn42De + chr2R 6886795 exon Spn42De + chr2R_6_6885001 chr2R_6885001 RAL-391_75b 178 chr2R 7052041 7052068 chr2R 7052120 7052147 7 79 1.0 0.5 0.8 3.9 106 chr2R 7052041 intergenic lbm + chr2R 7052094 intergenic lbm + chr2R 7052147 intergenic lbm + chr2R_7_7050001 chr2R_7050001 RAL-391_75b 179 chr2R 7160566 7160580 chr2R 7160644 7160658 4 78 1.0 3.0 2.0 1.3 92 chr2R 7160566 intron pk + chr2R 7160612 intron pk + chr2R 7160658 intron pk + chr2R_4_7160001 chr2R_7160001 RAL-391_75b 180 chr2R 7187908 7187931 chr2R 7188403 7188425 5 495 3.0 2.0 2.5 1.4 517 chr2R 7187908 intron pk + chr2R 7188166 intron pk + chr2R 7188425 intron pk + chr2R_5_7185001 chr2R_7185001 RAL-391_75b 181 chr2R 7231952 7231987 chr2R 7232030 7232065 8 78 0.0 1.5 0.8 4.4 113 chr2R 7231952 intergenic not near genes chr2R 7232008 intergenic not near genes chr2R 7232065 intergenic not near genes chr2R_8_7230001 chr2R_7230001 RAL-391_75b 182 chr2R 7235815 7235852 chr2R 7240907 7240943 jockey 8 5092 2.0 2.0 2.0 2.7 5128 chr2R 7235815 intergenic not near genes chr2R 7238379 intergenic not near genes chr2R 7240943 intergenic not near genes chr2R_8_7235001 chr2R_7235001 RAL-391_75b 183 chr2R 7269835 7269865 chr2R 7273944 7273973 10 4109 24.5 19.5 22.0 0.4 4138 chr2R 7269835 intergenic not near genes chr2R 7271904 intergenic Br140 - chr2R 7273973 exon Br140 - chr2R_10_7270001 chr2R_7270001 RAL-391_75b 184 chr2R 7760304 7760307 chr2R 7760440 7760444 4 137 1.0 5.5 3.2 1.0 140 chr2R 7760304 intron,intron CG30497 -,CG45093 - chr2R 7760374 intron,intron CG30497 -,CG45093 - chr2R 7760444 intron,intron CG30497 -,CG45093 - chr2R_4_7760001 chr2R_7760001 RAL-391_75b 185 chr2R 8249567 8249845 chr2R 8249649 8249939 7 87 1.0 0.5 0.8 3.9 372 chr2R 8249567 5` UTR CG44439 - chr2R 8249753 intergenic CG44439 - chr2R 8249939 intergenic CG44439 - chr2R_7_8245001 chr2R_8245001 RAL-391_75b 186 chr2R 8266534 8266568 chr2R 8266652 8266685 4 117 0.0 1.5 0.8 2.2 151 chr2R 8266534 intron CG30375 - chr2R 8266610 exon CG30375 - chr2R 8266685 exon CG30375 - chr2R_4_8265001 chr2R_8265001 RAL-391_75b 187 chr2R 8398207 8398232 chr2R 8402987 8403013 Doc 4 4780 2.0 1.5 1.8 1.4 4806 chr2R 8398207 intron CG2121 - chr2R 8400610 intron CG2121 - chr2R 8403013 intron CG2121 - chr2R_4_8400001 chr2R_8400001 RAL-391_75b 188 chr2R 8489728 8489754 chr2R 8489807 8489833 4 78 0.0 1.5 0.8 2.2 105 chr2R 8489728 intron mtt - chr2R 8489780 intron mtt - chr2R 8489833 intron mtt - chr2R_4_8485001 chr2R_8485001 RAL-391_75b 189 chr2R 8508760 8508778 chr2R 8508842 8508861 4 82 1.5 0.0 0.8 2.2 101 chr2R 8508760 intron mtt - chr2R 8508810 intron mtt - chr2R 8508861 intron mtt - chr2R_4_8505001 chr2R_8505001 RAL-391_75b 190 chr2R 8615774 8615795 chr2R 8615887 8615908 8 113 2.5 1.0 1.8 2.9 134 chr2R 8615774 intron Cirl + chr2R 8615841 intron Cirl + chr2R 8615908 5` UTR Cirl + chr2R_8_8615001 chr2R_8615001 RAL-391_75b 191 chr2R 8777933 8777945 chr2R 8784137 8784149 diver 4 6204 0.0 2.0 1.0 2.0 6216 chr2R 8777933 intergenic not near genes chr2R 8781041 intergenic not near genes chr2R 8784149 intergenic not near genes chr2R_4_8780001 chr2R_8780001 RAL-391_75b 192 chr2R 8926951 8926982 chr2R 8927044 8927075 10 93 2.0 1.0 1.5 4.0 124 chr2R 8926951 intergenic CG8237 +,CG8235 - chr2R 8927013 3` UTR CG8235 - chr2R 8927075 exon CG8235 - chr2R_10_8925001 chr2R_8925001 RAL-391_75b 193 chr2R 9052709 9052732 chr2R 9052789 9052813 5 81 0.0 0.5 0.2 4.2 104 chr2R 9052709 intron CG13743 - chr2R 9052761 intron CG13743 - chr2R 9052813 intron CG13743 - chr2R_5_9050001 chr2R_9050001 RAL-391_75b 194 chr2R 9075903 9075933 chr2R 9076036 9076068 4 134 0.0 1.5 0.8 2.2 165 chr2R 9075903 exon ana + chr2R 9075986 intron ana + chr2R 9076068 intron ana + chr2R_4_9075001 chr2R_9075001 RAL-391_75b 195 chr2R 9218473 9218492 chr2R 9219039 9219057 7 565 1.0 0.5 0.8 3.9 584 chr2R 9218473 intergenic not near genes chr2R 9218765 intergenic not near genes chr2R 9219057 intergenic not near genes chr2R_7_9215001 chr2R_9215001 RAL-391_75b 196 chr2R 9256048 9256079 chr2R 9256131 9256162 6 83 4.0 1.5 2.8 1.6 114 chr2R 9256048 intron Pkn - chr2R 9256105 intron Pkn - chr2R 9256162 intron Pkn - chr2R_6_9255001 chr2R_9255001 RAL-391_75b 197 chr2R 9561828 9561847 chr2R 9561916 9561935 5 88 0.0 0.0 0.0 5.0 107 chr2R 9561828 3` UTR,intron CR45281 -,CG1809 + chr2R 9561882 3` UTR,intron CR45281 -,CG1809 + chr2R 9561935 3` UTR,intron CR45281 -,CG1809 + chr2R_5_9560001 chr2R_9560001 RAL-391_75b 198 chr2R 9782453 9782471 chr2R 9782537 9782560 5 88 1.0 0.0 0.5 3.3 107 chr2R 9782453 intron CG1688 - chr2R 9782506 intron CG1688 - chr2R 9782560 intron CG1688 - chr2R_5_9780001 chr2R_9780001 RAL-391_75b 199 chr2R 9928422 9928445 chr2R 9928547 9928570 4 125 1.5 1.5 1.5 1.6 148 chr2R 9928422 intron Mef2 - chr2R 9928496 intron Mef2 - chr2R 9928570 intron Mef2 - chr2R_4_9925001 chr2R_9925001 RAL-391_75b 200 chr2R 9948387 9948408 chr2R 9948463 9948483 5 75 1.0 0.5 0.8 2.8 96 chr2R 9948387 intron Mef2 - chr2R 9948435 intron Mef2 - chr2R 9948483 intron Mef2 - chr2R_5_9945001 chr2R_9945001 RAL-391_75b 201 chr2R 9956065 9956083 chr2R 9956141 9956160 4 77 0.5 0.5 0.5 2.7 95 chr2R 9956065 intron Mef2 - chr2R 9956112 intron Mef2 - chr2R 9956160 intron Mef2 - chr2R_4_9955001 chr2R_9955001 RAL-391_75b 202 chr2R 10176879 10176907 chr2R 10186046 10186074 roo 4 9167 2.0 1.5 1.8 1.4 9195 chr2R 10176879 intron KCNQ - chr2R 10181476 intron KCNQ - chr2R 10186074 intron KCNQ - chr2R_4_10180001 chr2R_10180001 RAL-391_75b 203 chr2R 10190443 10190462 chr2R 10190527 10190546 4 84 1.5 1.0 1.2 1.8 103 chr2R 10190443 intron KCNQ - chr2R 10190494 intron KCNQ - chr2R 10190546 intron KCNQ - chr2R_4_10190001 chr2R_10190001 RAL-391_75b 204 chr2R 10216200 10216213 chr2R 10216278 10216291 4 78 0.0 2.0 1.0 2.0 91 chr2R 10216200 intron,intron CG12912 -,Hr46 - chr2R 10216246 intron,intron CG12912 -,Hr46 - chr2R 10216291 intron,intron CG12912 -,Hr46 - chr2R_4_10215001 chr2R_10215001 RAL-391_75b 205 chr2R 10319875 10319896 chr2R 10323765 10323785 7 3890 15.0 18.0 16.5 0.4 3910 chr2R 10319875 exon,3` UTR Ndg +,CG34222 - chr2R 10321830 3` UTR Ndg + chr2R 10323785 exon CG42732 - chr2R_7_10320001 chr2R_10320001 RAL-391_75b 206 chr2R 10352680 10352704 chr2R 10352757 10352781 4 77 0.5 1.5 1.0 2.0 101 chr2R 10352680 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352730 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352781 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_4_10350001 chr2R_10350001 RAL-391_75b 207 chr2R 10429020 10429047 chr2R 10429096 10429124 6 76 0.5 0.5 0.5 4.0 104 chr2R 10429020 intergenic not near genes chr2R 10429072 intergenic not near genes chr2R 10429124 intergenic not near genes chr2R_6_10425001 chr2R_10425001 RAL-391_75b 208 chr2R 10727497 10727527 chr2R 10727593 10727625 10 98 1.0 1.5 1.2 4.5 128 chr2R 10727497 intron Rab3 - chr2R 10727561 intron Rab3 - chr2R 10727625 intron Rab3 - chr2R_10_10725001 chr2R_10725001 RAL-391_75b 209 chr2R 11009815 11009848 chr2R 11018989 11019022 roo 4 9174 0.5 0.5 0.5 2.7 9207 chr2R 11009815 intron luna - chr2R 11014418 intron luna - chr2R 11019022 intron luna - chr2R_4_11010001 chr2R_11010001 RAL-391_75b 210 chr2R 11207821 11207843 chr2R 11208014 11208035 BS 4 193 2.5 0.5 1.5 1.6 214 chr2R 11207821 intron shn + chr2R 11207928 intron shn + chr2R 11208035 intron shn + chr2R_4_11205001 chr2R_11205001 RAL-391_75b 211 chr2R 11259615 11259648 chr2R 11259709 11259742 8 94 1.5 2.0 1.8 2.9 127 chr2R 11259615 exon Cpr47Ec - chr2R 11259678 exon Cpr47Ec - chr2R 11259742 intron Cpr47Ec - chr2R_8_11255001 chr2R_11255001 RAL-391_75b 212 chr2R 11641851 11641880 chr2R 11641945 11641974 8 94 2.5 2.0 2.2 2.5 123 chr2R 11641851 3` UTR CG9003 - chr2R 11641912 3` UTR CG9003 - chr2R 11641974 3` UTR CG9003 - chr2R_8_11640001 chr2R_11640001 RAL-391_75b 213 chr2R 12124831 12124859 chr2R 12124915 12124943 4 84 0.5 0.5 0.5 2.7 112 chr2R 12124831 intergenic not near genes chr2R 12124887 intergenic not near genes chr2R 12124943 intergenic not near genes chr2R_4_12120001 chr2R_12120001 RAL-391_75b 214 chr2R 12186002 12186029 chr2R 12186097 12186123 5 94 3.0 2.0 2.5 1.4 121 chr2R 12186002 intron Cyp6g1 + chr2R 12186062 intron Cyp6g1 + chr2R 12186123 intron Cyp6g1 + chr2R_5_12185001 chr2R_12185001 RAL-391_75b 215 chr2R 12189403 12189409 chr2R 12189596 12189600 4 192 39.5 45.0 42.2 0.1 197 chr2R 12189403 exon Cyp6g2 - chr2R 12189502 exon Cyp6g2 - chr2R 12189600 exon Cyp6g2 - chr2R_4_12185001 chr2R_12185001 RAL-391_75b 216 chr2R 12187472 12187505 chr2R 12190088 12190121 32 2617 61.5 35.0 48.2 0.7 2649 chr2R 12187472 exon Cyp6g1 + chr2R 12188796 exon Cyp6g2 - chr2R 12190121 exon Cyp6g2 - chr2R_32_12185001 chr2R_12185001 RAL-391_75b 217 chr2R 12217576 12217602 chr2R 12217657 12217683 5 81 1.5 1.0 1.2 2.3 107 chr2R 12217576 intergenic not near genes chr2R 12217630 intergenic not near genes chr2R 12217683 intergenic not near genes chr2R_5_12215001 chr2R_12215001 RAL-391_75b 218 chr2R 12385352 12385373 chr2R 12385433 12385454 9 81 0.0 1.5 0.8 5.0 102 chr2R 12385352 intergenic not near genes chr2R 12385403 intergenic not near genes chr2R 12385454 intergenic not near genes chr2R_9_12385001 chr2R_12385001 RAL-391_75b 219 chr2R 12481145 12481169 chr2R 12482949 12482973 roo 9 1804 2.0 2.5 2.2 2.8 1828 chr2R 12481145 exon Dh44-R2 + chr2R 12482059 intron Dh44-R2 + chr2R 12482973 intron Dh44-R2 + chr2R_9_12480001 chr2R_12480001 RAL-391_75b 220 chr2R 12501697 12501720 chr2R 12503859 12503882 Rt1c 4 2162 0.0 1.0 0.5 2.7 2185 chr2R 12501697 intron fdl - chr2R 12502790 intron fdl - chr2R 12503882 intron fdl - chr2R_4_12500001 chr2R_12500001 RAL-391_75b 221 chr2R 12722061 12722086 chr2R 12722172 12722197 7 111 0.0 1.5 0.8 3.9 136 chr2R 12722061 intron CG42663 + chr2R 12722129 intron CG42663 + chr2R 12722197 intron CG42663 + chr2R_7_12720001 chr2R_12720001 RAL-391_75b 222 chr2R 12789316 12789325 chr2R 12797677 12797688 roo 4 8362 0.5 1.5 1.0 2.0 8372 chr2R 12789316 intron,3` UTR sca +,CR45137 - chr2R 12793502 intron,intron sca +,CR45137 - chr2R 12797688 intron,3` UTR sca +,CR45137 - chr2R_4_12790001 chr2R_12790001 RAL-391_75b 223 chr2R 12808318 12808344 chr2R 12808413 12808439 4 95 1.0 1.0 1.0 2.0 121 chr2R 12808318 intergenic not near genes chr2R 12808378 intergenic not near genes chr2R 12808439 intergenic not near genes chr2R_4_12805001 chr2R_12805001 RAL-391_75b 224 chr2R 13309661 13309677 chr2R 13309778 13309795 5 118 0.5 0.0 0.2 4.2 134 chr2R 13309661 intergenic not near genes chr2R 13309728 intergenic not near genes chr2R 13309795 intergenic not near genes chr2R_5_13305001 chr2R_13305001 RAL-391_75b 225 chr2R 13403925 13403935 chr2R 13404010 13404019 5 84 2.0 1.0 1.5 2.0 94 chr2R 13403925 intergenic not near genes chr2R 13403972 intergenic not near genes chr2R 13404019 intergenic not near genes chr2R_5_13400001 chr2R_13400001 RAL-391_75b 226 chr2R 13492583 13492610 chr2R 13492660 13492688 4 78 0.5 1.5 1.0 2.0 105 chr2R 13492583 intron bbc - chr2R 13492636 intron bbc - chr2R 13492688 intron bbc - chr2R_4_13490001 chr2R_13490001 RAL-391_75b 227 chr2R 13580497 13580532 chr2R 13580847 13580882 jockey 4 350 0.0 0.0 0.0 4.0 385 chr2R 13580497 3` UTR CG6191 - chr2R 13580690 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580882 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_4_13580001 chr2R_13580001 RAL-391_75b 228 chr2R 13627790 13627805 chr2R 13627921 13627936 4 131 1.0 0.5 0.8 2.2 146 chr2R 13627790 intron fas + chr2R 13627863 intron fas + chr2R 13627936 intron fas + chr2R_4_13625001 chr2R_13625001 RAL-391_75b 229 chr2R 13683877 13683894 chr2R 13683955 13683971 7 78 0.5 2.5 1.5 2.8 94 chr2R 13683877 intron fas + chr2R 13683924 intron fas + chr2R 13683971 intron fas + chr2R_7_13680001 chr2R_13680001 RAL-391_75b 230 chr2R 13721207 13721218 chr2R 13721290 13721301 4 83 1.5 2.0 1.8 1.4 94 chr2R 13721207 intron fas + chr2R 13721254 intron fas + chr2R 13721301 intron fas + chr2R_4_13720001 chr2R_13720001 RAL-391_75b 231 chr2R 13768980 13769009 chr2R 13769079 13769108 5 99 1.0 2.5 1.8 1.8 128 chr2R 13768980 intergenic not near genes chr2R 13769044 intergenic not near genes chr2R 13769108 intergenic not near genes chr2R_5_13765001 chr2R_13765001 RAL-391_75b 232 chr2R 13922634 13922648 chr2R 13922710 13922724 4 76 1.5 2.5 2.0 1.3 90 chr2R 13922634 intron shot - chr2R 13922679 intron shot - chr2R 13922724 intron shot - chr2R_4_13920001 chr2R_13920001 RAL-391_75b 233 chr2R 14467310 14467321 chr2R 14476459 14476473 roo 5 9151 2.0 3.0 2.5 1.4 9163 chr2R 14467310 intergenic not near genes chr2R 14471892 intergenic not near genes chr2R 14476473 5` UTR CR44462 + chr2R_5_14470001 chr2R_14470001 RAL-391_75b 234 chr2R 14565558 14565590 chr2R 14565635 14565667 6 77 1.0 2.0 1.5 2.4 109 chr2R 14565558 intron ttv + chr2R 14565612 intron ttv + chr2R 14565667 intron ttv + chr2R_6_14565001 chr2R_14565001 RAL-391_75b 235 chr2R 14707066 14707093 chr2R 14707146 14707173 6 80 0.5 1.0 0.8 3.3 107 chr2R 14707066 intron mspo - chr2R 14707120 intron mspo - chr2R 14707173 intron mspo - chr2R_6_14705001 chr2R_14705001 RAL-391_75b 236 chr2R 14816111 14816127 chr2R 14816207 14816223 6 96 2.5 2.5 2.5 1.7 112 chr2R 14816111 intergenic not near genes chr2R 14816167 intergenic not near genes chr2R 14816223 intergenic not near genes chr2R_6_14815001 chr2R_14815001 RAL-391_75b 237 chr2R 14855035 14855064 chr2R 14855127 14855156 4 92 1.5 1.0 1.2 1.8 121 chr2R 14855035 5` UTR Ciao1 - chr2R 14855096 intergenic Ciao1 -,HPS1 + chr2R 14855156 intergenic Ciao1 -,HPS1 + chr2R_4_14855001 chr2R_14855001 RAL-391_75b 238 chr2R 14911701 14911725 chr2R 14911824 14911848 4 123 1.5 0.0 0.8 2.2 147 chr2R 14911701 intron CG10249 - chr2R 14911774 intron CG10249 - chr2R 14911848 intron CG10249 - chr2R_4_14910001 chr2R_14910001 RAL-391_75b 239 chr2R 15015460 15015486 chr2R 15022882 15022910 mdg1 4 7423 0.5 0.0 0.2 3.3 7450 chr2R 15015460 intron hbs + chr2R 15019185 intron hbs + chr2R 15022910 intron hbs + chr2R_4_15015001 chr2R_15015001 RAL-391_75b 240 chr2R 15119317 15119347 chr2R 15127798 15127828 Tirant 4 8481 3.0 1.0 2.0 1.3 8511 chr2R 15119317 intron chn + chr2R 15123572 intron chn + chr2R 15127828 intron chn + chr2R_4_15120001 chr2R_15120001 RAL-391_75b 241 chr2R 15133427 15133455 chr2R 15133518 15133572 5 112 1.5 0.0 0.8 2.8 145 chr2R 15133427 intron chn + chr2R 15133500 intron chn + chr2R 15133572 intron chn + chr2R_5_15130001 chr2R_15130001 RAL-391_75b 242 chr2R 15296162 15296173 chr2R 15296245 15296254 4 82 2.0 0.0 1.0 2.0 92 chr2R 15296162 intron Trpm - chr2R 15296208 intron Trpm - chr2R 15296254 intron Trpm - chr2R_4_15295001 chr2R_15295001 RAL-391_75b 243 chr2R 15395866 15395886 chr2R 15395971 15395991 9 105 2.0 2.5 2.2 2.8 125 chr2R 15395866 intergenic not near genes chr2R 15395928 intergenic not near genes chr2R 15395991 intergenic not near genes chr2R_9_15395001 chr2R_15395001 RAL-391_75b 244 chr2R 15630858 15630873 chr2R 15631228 15631242 5 370 3.0 3.5 3.2 1.2 384 chr2R 15630858 intron CG42524 + chr2R 15631050 intron CG42524 + chr2R 15631242 intron CG42524 + chr2R_5_15630001 chr2R_15630001 RAL-391_75b 245 chr2R 15645677 15645691 chr2R 15645773 15645787 4 96 1.0 0.0 0.5 2.7 110 chr2R 15645677 intron CG42524 + chr2R 15645732 intron CG42524 + chr2R 15645787 intron CG42524 + chr2R_4_15645001 chr2R_15645001 RAL-391_75b 246 chr2R 15833541 15833561 chr2R 15833626 15833643 5 85 0.5 1.5 1.0 2.5 102 chr2R 15833541 intron,intron tun +,Poxn - chr2R 15833592 intron,intron tun +,Poxn - chr2R 15833643 intron,intron tun +,Poxn - chr2R_5_15830001 chr2R_15830001 RAL-391_75b 247 chr2R 16033516 16033530 chr2R 16033601 16033617 4 86 2.0 0.0 1.0 2.0 101 chr2R 16033516 intron SP2353 + chr2R 16033566 intron SP2353 + chr2R 16033617 intron SP2353 + chr2R_4_16030001 chr2R_16030001 RAL-391_75b 248 chr2R 16380121 16380152 chr2R 16380219 16380249 4 98 2.0 0.0 1.0 2.0 128 chr2R 16380121 5` UTR,3` UTR CR45316 +,CR45317 - chr2R 16380185 3` UTR CR45317 - chr2R 16380249 intergenic CR45317 -,CR45316 +,CG43187 + chr2R_4_16380001 chr2R_16380001 RAL-391_75b 249 chr2R 16480774 16480782 chr2R 16480850 16480858 4 76 0.5 1.0 0.8 2.2 84 chr2R 16480774 intergenic not near genes chr2R 16480816 intergenic not near genes chr2R 16480858 intergenic not near genes chr2R_4_16480001 chr2R_16480001 RAL-391_75b 250 chr2R 16571880 16571898 chr2R 16571975 16571993 5 95 1.0 1.5 1.2 2.3 113 chr2R 16571880 intergenic CG4927 + chr2R 16571936 intergenic CG4927 + chr2R 16571993 intergenic CG4927 + chr2R_5_16570001 chr2R_16570001 RAL-391_75b 251 chr2R 17052080 17052114 chr2R 17052199 17052231 5 118 1.0 2.5 1.8 1.8 151 chr2R 17052080 exon CG9646 + chr2R 17052156 exon CG9646 + chr2R 17052231 exon CG9646 + chr2R_5_17050001 chr2R_17050001 RAL-391_75b 252 chr2R 17459010 17459016 chr2R 17459095 17459101 4 85 3.5 1.5 2.5 1.1 91 chr2R 17459010 intron CG14478 + chr2R 17459056 intron CG14478 + chr2R 17459101 intron CG14478 + chr2R_4_17455001 chr2R_17455001 RAL-391_75b 253 chr2R 17478831 17478864 chr2R 17478909 17478942 4 78 1.0 0.0 0.5 2.7 111 chr2R 17478831 3` UTR,intron CG43110 -,veil + chr2R 17478886 3` UTR,intron CG43110 -,veil + chr2R 17478942 3` UTR,intron CG43110 -,veil + chr2R_4_17475001 chr2R_17475001 RAL-391_75b 254 chr2R 17485921 17485944 chr2R 17490691 17490714 F-element 5 4770 0.5 1.5 1.0 2.5 4793 chr2R 17485921 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488318 intron NT5E-2 + chr2R 17490714 intron NT5E-2 + chr2R_5_17485001 chr2R_17485001 RAL-391_75b 255 chr2R 17627753 17627785 chr2R 17628080 17628112 4 327 0.5 1.0 0.8 2.2 359 chr2R 17627753 intron CG10936 - chr2R 17627932 intron CG10936 - chr2R 17628112 intron CG10936 - chr2R_4_17625001 chr2R_17625001 RAL-391_75b 256 chr2R 18045672 18045701 chr2R 18046024 18046053 jockey 5 352 1.0 1.0 1.0 2.5 381 chr2R 18045672 intergenic not near genes chr2R 18045862 intergenic not near genes chr2R 18046053 intergenic CG5767 - chr2R_5_18045001 chr2R_18045001 RAL-391_75b 257 chr2R 18124340 18124373 chr2R 18124417 18124450 4 77 1.0 1.5 1.2 1.8 110 chr2R 18124340 intron stau - chr2R 18124395 intron stau - chr2R 18124450 intron stau - chr2R_4_18120001 chr2R_18120001 RAL-391_75b 258 chr2R 18341204 18341231 chr2R 18341814 18341840 5 610 1.5 1.5 1.5 2.0 636 chr2R 18341204 intron sbb - chr2R 18341522 intron sbb - chr2R 18341840 intron sbb - chr2R_5_18340001 chr2R_18340001 RAL-391_75b 259 chr2R 18408289 18408314 chr2R 18408410 18408435 4 121 2.5 2.0 2.2 1.2 146 chr2R 18408289 exon GstE8 + chr2R 18408362 exon GstE8 + chr2R 18408435 exon GstE8 + chr2R_4_18405001 chr2R_18405001 RAL-391_75b 260 chr2R 18528209 18528217 chr2R 18528294 18528302 4 85 2.5 3.0 2.8 1.1 93 chr2R 18528209 intron CG10924 + chr2R 18528256 intron CG10924 + chr2R 18528302 intron CG10924 + chr2R_4_18525001 chr2R_18525001 RAL-391_75b 261 chr2R 18692902 18692915 chr2R 18692989 18693001 4 87 0.5 0.5 0.5 2.7 99 chr2R 18692902 intron Sik3 + chr2R 18692952 intron Sik3 + chr2R 18693001 intron Sik3 + chr2R_4_18690001 chr2R_18690001 RAL-391_75b 262 chr2R 18819054 18819062 chr2R 18819131 18819139 4 77 0.0 0.0 0.0 4.0 85 chr2R 18819054 intergenic Phb2 + chr2R 18819096 intergenic Phb2 + chr2R 18819139 intergenic Phb2 + chr2R_4_18815001 chr2R_18815001 RAL-391_75b 263 chr2R 19048312 19048346 chr2R 19048409 19048443 4 97 0.0 2.5 1.2 1.8 131 chr2R 19048312 intergenic not near genes chr2R 19048378 intergenic not near genes chr2R 19048443 intergenic not near genes chr2R_4_19045001 chr2R_19045001 RAL-391_75b 264 chr2R 19776592 19776599 chr2R 19779915 19779922 jockey 5 3323 1.5 0.5 1.0 2.5 3330 chr2R 19776592 intergenic not near genes chr2R 19778257 intergenic not near genes chr2R 19779922 intergenic not near genes chr2R_5_19775001 chr2R_19775001 RAL-391_75b 265 chr2R 19914843 19914870 chr2R 19922255 19922282 mdg1 5 7412 1.0 0.5 0.8 2.8 7439 chr2R 19914843 intergenic not near genes chr2R 19918562 intergenic not near genes chr2R 19922282 intergenic not near genes chr2R_5_19915001 chr2R_19915001 RAL-391_75b 266 chr2R 19923688 19923724 chr2R 19923785 19923821 8 97 0.0 0.5 0.2 6.7 133 chr2R 19923688 intergenic not near genes chr2R 19923754 intergenic not near genes chr2R 19923821 intergenic not near genes chr2R_8_19920001 chr2R_19920001 RAL-391_75b 267 chr2R 20118879 20118901 chr2R 20118965 20118989 4 88 0.0 0.0 0.0 4.0 110 chr2R 20118879 intergenic not near genes chr2R 20118934 intergenic not near genes chr2R 20118989 intergenic not near genes chr2R_4_20115001 chr2R_20115001 RAL-391_75b 268 chr2R 20162687 20162711 chr2R 20162804 20162828 6 117 0.0 2.0 1.0 3.0 141 chr2R 20162687 intergenic not near genes chr2R 20162758 intergenic not near genes chr2R 20162828 intergenic not near genes chr2R_6_20160001 chr2R_20160001 RAL-391_75b 269 chr2R 20326760 20326792 chr2R 20326836 20326869 8 76 1.0 0.0 0.5 5.3 109 chr2R 20326760 5` UTR MED8 - chr2R 20326814 intergenic MED8 -,CG8929 + chr2R 20326869 intergenic MED8 -,CG8929 + chr2R_8_20325001 chr2R_20325001 RAL-391_75b 270 chr2R 20483926 20483945 chr2R 20484299 20484318 5 373 1.5 3.5 2.5 1.4 392 chr2R 20483926 intergenic not near genes chr2R 20484122 intergenic not near genes chr2R 20484318 intergenic not near genes chr2R_5_20480001 chr2R_20480001 RAL-391_75b 271 chr2R 20601725 20601752 chr2R 20601809 20601836 6 85 0.0 0.5 0.2 5.0 111 chr2R 20601725 intron bl + chr2R 20601780 intron bl + chr2R 20601836 intron bl + chr2R_6_20600001 chr2R_20600001 RAL-391_75b 272 chr2R 20702678 20702694 chr2R 20702754 20702768 4 76 0.5 0.0 0.2 3.3 90 chr2R 20702678 intron dpr + chr2R 20702723 intron dpr + chr2R 20702768 intron dpr + chr2R_4_20700001 chr2R_20700001 RAL-391_75b 273 chr2R 20796047 20796073 chr2R 20796160 20796186 6 112 0.0 2.0 1.0 3.0 139 chr2R 20796047 intergenic not near genes chr2R 20796116 intergenic not near genes chr2R 20796186 intergenic not near genes chr2R_6_20795001 chr2R_20795001 RAL-391_75b 274 chr2R 21040871 21040885 chr2R 21040947 21040961 4 76 0.5 0.5 0.5 2.7 90 chr2R 21040871 intergenic not near genes chr2R 21040916 intergenic not near genes chr2R 21040961 intergenic not near genes chr2R_4_21040001 chr2R_21040001 RAL-391_75b 275 chr2R 21136898 21136907 chr2R 21136982 21136991 4 84 2.5 1.5 2.0 1.3 93 chr2R 21136898 intron Magi - chr2R 21136944 intron Magi - chr2R 21136991 intron Magi - chr2R_4_21135001 chr2R_21135001 RAL-391_75b 276 chr2R 21243025 21243046 chr2R 21243117 21243138 4 92 1.0 0.5 0.8 2.2 113 chr2R 21243025 intron ASPP - chr2R 21243082 intron ASPP - chr2R 21243138 intron ASPP - chr2R_4_21240001 chr2R_21240001 RAL-391_75b 277 chr2R 21546786 21546811 chr2R 21546866 21546892 6 81 4.0 2.0 3.0 1.5 106 chr2R 21546786 intron Egfr + chr2R 21546839 intron Egfr + chr2R 21546892 intron Egfr + chr2R_6_21545001 chr2R_21545001 RAL-391_75b 278 chr2R 21738280 21738306 chr2R 21747440 21747466 roo 6 9160 1.0 0.5 0.8 3.3 9186 chr2R 21738280 intergenic not near genes chr2R 21742873 intergenic not near genes chr2R 21747466 intergenic not near genes chr2R_6_21740001 chr2R_21740001 RAL-391_75b 279 chr2R 21753108 21753117 chr2R 21753593 21753602 roo 5 485 1.0 1.0 1.0 2.5 494 chr2R 21753108 intergenic not near genes chr2R 21753355 intergenic not near genes chr2R 21753602 intergenic not near genes chr2R_5_21750001 chr2R_21750001 RAL-391_75b 280 chr2R 21805826 21805861 chr2R 21805903 21805938 6 77 1.5 2.0 1.8 2.1 112 chr2R 21805826 intergenic not near genes chr2R 21805882 intergenic not near genes chr2R 21805938 intergenic not near genes chr2R_6_21805001 chr2R_21805001 RAL-391_75b 281 chr2R 21809530 21809554 chr2R 21817770 21817794 roo 4 8240 0.5 1.5 1.0 2.0 8264 chr2R 21809530 intergenic not near genes chr2R 21813662 intergenic not near genes chr2R 21817794 intergenic not near genes chr2R_4_21810001 chr2R_21810001 RAL-391_75b 282 chr2R 21857345 21857370 chr2R 21857436 21857461 4 91 0.0 0.0 0.0 4.0 116 chr2R 21857345 intergenic not near genes chr2R 21857403 intergenic not near genes chr2R 21857461 intergenic not near genes chr2R_4_21855001 chr2R_21855001 RAL-391_75b 283 chr2R 21893007 21893033 chr2R 21893088 21893114 5 80 1.5 2.0 1.8 1.8 107 chr2R 21893007 intron Fili + chr2R 21893060 intron Fili + chr2R 21893114 intron Fili + chr2R_5_21890001 chr2R_21890001 RAL-391_75b 284 chr2R 21924958 21924986 chr2R 21925040 21925068 4 82 2.0 0.5 1.2 1.8 110 chr2R 21924958 intron Fili + chr2R 21925013 intron Fili + chr2R 21925068 intron Fili + chr2R_4_21925001 chr2R_21925001 RAL-391_75b 285 chr2R 22037784 22037793 chr2R 22037866 22037875 4 82 1.0 0.0 0.5 2.7 91 chr2R 22037784 intron CG34370 - chr2R 22037830 intron CG34370 - chr2R 22037875 intron CG34370 - chr2R_4_22035001 chr2R_22035001 RAL-391_75b 286 chr2R 22142665 22142693 chr2R 22142779 22142805 4 113 0.5 0.5 0.5 2.7 140 chr2R 22142665 intron a + chr2R 22142735 intron a + chr2R 22142805 intron a + chr2R_4_22140001 chr2R_22140001 RAL-391_75b 287 chr2R 22171210 22171237 chr2R 22176851 22176878 6 5641 24.5 12.5 18.5 0.3 5668 chr2R 22171210 exon a + chr2R 22174044 exon CG3045 - chr2R 22176878 exon CG6758 + chr2R_6_22170001 chr2R_22170001 RAL-391_75b 288 chr2R 22280116 22280135 chr2R 22280202 22280221 6 86 0.5 0.5 0.5 4.0 105 chr2R 22280116 intron dve + chr2R 22280168 intron dve + chr2R 22280221 intron dve + chr2R_6_22280001 chr2R_22280001 RAL-391_75b 289 chr2R 22597526 22597549 chr2R 22597614 22597639 7 90 1.5 0.5 1.0 3.5 113 chr2R 22597526 5` UTR CG4269 + chr2R 22597582 5` UTR CG4269 + chr2R 22597639 5` UTR CG4269 + chr2R_7_22595001 chr2R_22595001 RAL-391_75b 290 chr2R 23052678 23052686 chr2R 23052754 23052762 4 76 1.0 3.0 2.0 1.3 84 chr2R 23052678 intergenic not near genes chr2R 23052720 intergenic not near genes chr2R 23052762 intergenic not near genes chr2R_4_23050001 chr2R_23050001 RAL-391_75b 291 chr2R 23054003 23054031 chr2R 23054081 23054109 4 78 0.5 1.0 0.8 2.2 106 chr2R 23054003 intergenic not near genes chr2R 23054056 intergenic not near genes chr2R 23054109 intergenic not near genes chr2R_4_23050001 chr2R_23050001 RAL-391_75b 292 chr2R 23070413 23070445 chr2R 23070509 23070541 7 96 1.0 3.0 2.0 2.3 128 chr2R 23070413 intron l(2)k09913 + chr2R 23070477 intron l(2)k09913 + chr2R 23070541 intron l(2)k09913 + chr2R_7_23070001 chr2R_23070001 RAL-391_75b 293 chr2R 23402624 23402637 chr2R 23407700 23407713 flea 4 5076 1.5 3.0 2.2 1.2 5089 chr2R 23402624 intergenic CG3520 - chr2R 23405168 intergenic not near genes chr2R 23407713 intergenic not near genes chr2R_4_23405001 chr2R_23405001 RAL-391_75b 294 chr2R 23529572 23529605 chr2R 23537148 23537180 412 6 7576 2.5 3.0 2.8 1.6 7608 chr2R 23529572 intron bw - chr2R 23533376 intron bw - chr2R 23537180 exon bw - chr2R_6_23530001 chr2R_23530001 RAL-391_75b 295 chr2R 23607054 23607193 chr2R 23607135 23607286 5 88 0.5 1.5 1.0 2.5 232 chr2R 23607054 intron CG17664 - chr2R 23607170 intron CG17664 - chr2R 23607286 intron CG17664 - chr2R_5_23605001 chr2R_23605001 RAL-391_75b 296 chr2R 23784475 23784494 chr2R 23784553 23784572 4 78 1.0 0.5 0.8 2.2 97 chr2R 23784475 intron CG9850 - chr2R 23784524 intron CG9850 - chr2R 23784572 intron CG9850 - chr2R_4_23780001 chr2R_23780001 RAL-391_75b 297 chr2R 23986515 23986548 chr2R 23986594 23986628 5 80 0.5 0.5 0.5 3.3 113 chr2R 23986515 intron Phm - chr2R 23986572 intron Phm - chr2R 23986628 intron,5` UTR Phm -,CG30178 + chr2R_5_23985001 chr2R_23985001 RAL-391_75b 298 chr2R 24077929 24077959 chr2R 24078005 24078035 6 76 2.0 1.5 1.8 2.1 106 chr2R 24077929 3` UTR Mlp60A + chr2R 24077982 3` UTR Mlp60A + chr2R 24078035 3` UTR Mlp60A + chr2R_6_24075001 chr2R_24075001 RAL-391_75b 299 chr2R 24491274 24491294 chr2R 24491421 24491441 5 146 2.0 0.5 1.2 2.3 167 chr2R 24491274 intergenic not near genes chr2R 24491358 intergenic not near genes chr2R 24491441 intergenic not near genes chr2R_5_24490001 chr2R_24490001 RAL-391_75b 300 chr2R 24509308 24509315 chr2R 24509393 24509400 4 84 2.0 2.0 2.0 1.3 92 chr2R 24509308 intergenic Letm1 - chr2R 24509354 intergenic Letm1 - chr2R 24509400 intergenic Letm1 - chr2R_4_24505001 chr2R_24505001 RAL-391_75b 301 chr2R 24520894 24520925 chr2R 24520976 24521006 11 82 3.0 2.5 2.8 2.9 112 chr2R 24520894 exon Ir60d + chr2R 24520950 exon Ir60d + chr2R 24521006 exon Ir60d + chr2R_11_24520001 chr2R_24520001 RAL-391_75b 302 chr2R 24590114 24590137 chr2R 24590206 24590229 7 92 5.0 2.5 3.8 1.5 115 chr2R 24590114 intron pio + chr2R 24590172 intron pio + chr2R 24590229 intron pio + chr2R_7_24590001 chr2R_24590001 RAL-391_75b 303 chr2R 24727884 24727916 chr2R 24735392 24735424 mdg1 7 7508 1.5 3.5 2.5 2.0 7540 chr2R 24727884 intron Mid1 - chr2R 24731654 intron Mid1 - chr2R 24735424 intron Mid1 - chr2R_7_24730001 chr2R_24730001 RAL-391_75b 304 chr2R 24737149 24737174 chr2R 24737269 24737294 7 120 2.5 2.0 2.2 2.2 145 chr2R 24737149 intergenic Mid1 - chr2R 24737222 intergenic not near genes chr2R 24737294 intergenic not near genes chr2R_7_24735001 chr2R_24735001 RAL-391_75b 305 chr2R 24742893 24742908 chr2R 24742981 24742996 4 88 1.0 1.5 1.2 1.8 103 chr2R 24742893 intergenic not near genes chr2R 24742944 intergenic not near genes chr2R 24742996 intergenic not near genes chr2R_4_24740001 chr2R_24740001 RAL-391_75b 306 chr2R 24763614 24763640 chr2R 24765589 24765616 G2 8 1976 2.5 2.5 2.5 2.3 2002 chr2R 24763614 exon CG3894 + chr2R 24764615 intron CG3894 + chr2R 24765616 exon CG3894 + chr2R_8_24760001 chr2R_24760001 RAL-391_75b 307 chr2R 25014559 25014573 chr2R 25014635 25014649 5 76 0.0 0.0 0.0 5.0 90 chr2R 25014559 intron uzip + chr2R 25014604 intron uzip + chr2R 25014649 intron uzip + chr2R_5_25010001 chr2R_25010001 RAL-391_75b 308 chr2R 25099236 25099262 chr2R 25099312 25099335 4 75 1.0 1.0 1.0 2.0 99 chr2R 25099236 intron lov - chr2R 25099286 intron lov - chr2R 25099335 intron lov - chr2R_4_25095001 chr2R_25095001 RAL-391_75b 309 chr2R 25101281 25101309 chr2R 25101383 25101411 6 102 2.5 1.5 2.0 2.0 130 chr2R 25101281 intron lov - chr2R 25101346 intron lov - chr2R 25101411 intron lov - chr2R_6_25100001 chr2R_25100001 RAL-391_75b 310 chr2R 25104779 25104802 chr2R 25104904 25104927 6 125 1.5 2.0 1.8 2.1 148 chr2R 25104779 intron lov - chr2R 25104853 intron lov - chr2R 25104927 intron lov - chr2R_6_25100001 chr2R_25100001 RAL-391_75b 311 chr2R 25141659 25141682 chr2R 25159349 25159372 roo 6 17690 0.5 2.5 1.5 2.4 17713 chr2R 25141659 intergenic not near genes chr2R 25150516 intergenic not near genes chr2R 25159372 intergenic not near genes chr2R_6_25150001 chr2R_25150001 RAL-391_75b 312 chr3L 87065 87084 chr3L 87347 87366 4 282 2.5 1.0 1.8 1.4 301 chr3L 87065 intergenic not near genes chr3L 87216 intergenic not near genes chr3L 87366 intergenic not near genes chr3L_4_85001 chr3L_85001 RAL-391_75b 313 chr3L 416154 416167 chr3L 416242 416255 4 88 0.5 2.5 1.5 1.6 101 chr3L 416154 intergenic not near genes chr3L 416204 intergenic not near genes chr3L 416255 intergenic not near genes chr3L_4_415001 chr3L_415001 RAL-391_75b 314 chr3L 651386 651406 chr3L 651474 651494 5 88 3.0 0.5 1.8 1.8 108 chr3L 651386 intergenic Gale +,CG3402 - chr3L 651440 intergenic CG3402 -,Gale + chr3L 651494 intergenic CG3402 -,Gale + chr3L_5_650001 chr3L_650001 RAL-391_75b 315 chr3L 740465 740485 chr3L 740546 740566 6 81 5.0 2.5 3.8 1.2 101 chr3L 740465 intron hng3 - chr3L 740516 intron hng3 - chr3L 740566 intron hng3 - chr3L_6_740001 chr3L_740001 RAL-391_75b 316 chr3L 832599 832635 chr3L 832679 832715 6 80 0.5 1.5 1.0 3.0 116 chr3L 832599 intron,3` UTR CG13900 -,snoRNA:Psi28S-3308 - chr3L 832657 intron CG13900 - chr3L 832715 exon CG13900 - chr3L_6_830001 chr3L_830001 RAL-391_75b 317 chr3L 858004 858029 chr3L 866482 866509 Tirant 7 8480 0.0 0.5 0.2 5.8 8505 chr3L 858004 intergenic not near genes chr3L 862256 intergenic not near genes chr3L 866509 5` UTR CG12502 + chr3L_7_860001 chr3L_860001 RAL-391_75b 318 chr3L 875657 875686 chr3L 875744 875773 5 87 2.0 0.0 1.0 2.5 116 chr3L 875657 intron CG32479 + chr3L 875715 intron CG32479 + chr3L 875773 intron CG32479 + chr3L_5_875001 chr3L_875001 RAL-391_75b 319 chr3L 939786 939802 chr3L 940907 940923 jockey 4 1121 4.0 4.0 4.0 0.8 1137 chr3L 939786 intron Glut1 + chr3L 940354 intron Glut1 + chr3L 940923 intron Glut1 + chr3L_4_940001 chr3L_940001 RAL-391_75b 320 chr3L 1109637 1109667 chr3L 1109725 1109755 5 88 1.5 1.0 1.2 2.3 118 chr3L 1109637 intergenic not near genes chr3L 1109696 intergenic not near genes chr3L 1109755 intergenic not near genes chr3L_5_1105001 chr3L_1105001 RAL-391_75b 321 chr3L 1219602 1219621 chr3L 1227335 1227354 412 8 7732 3.5 5.5 4.5 1.5 7752 chr3L 1219602 intron mwh + chr3L 1223478 intron mwh + chr3L 1227354 intron mwh + chr3L_8_1220001 chr3L_1220001 RAL-391_75b 322 chr3L 1259842 1259872 chr3L 1260939 1260969 5 1097 0.0 0.5 0.2 4.2 1127 chr3L 1259842 intron CG9134 + chr3L 1260406 intron CG9134 + chr3L 1260969 intron CG9134 + chr3L_5_1260001 chr3L_1260001 RAL-391_75b 323 chr3L 1310985 1310999 chr3L 1315845 1315865 6 4861 16.0 8.5 12.2 0.5 4880 chr3L 1310985 exon CG2469 + chr3L 1313425 intergenic CG9186 -,CG9153 + chr3L 1315865 exon CG9153 + chr3L_6_1310001 chr3L_1310001 RAL-391_75b 324 chr3L 1396742 1396751 chr3L 1396826 1396835 4 84 0.5 0.5 0.5 2.7 93 chr3L 1396742 intron Ptp61F - chr3L 1396788 intron Ptp61F - chr3L 1396835 intron Ptp61F - chr3L_4_1395001 chr3L_1395001 RAL-391_75b 325 chr3L 1459321 1459353 chr3L 1459555 1459587 5 233 1.5 4.5 3.0 1.2 266 chr3L 1459321 intron Ptp61F - chr3L 1459454 intron Ptp61F - chr3L 1459587 intron Ptp61F - chr3L_5_1455001 chr3L_1455001 RAL-391_75b 326 chr3L 1481001 1481025 chr3L 1481081 1481105 7 80 0.5 2.0 1.2 3.2 104 chr3L 1481001 intron stet - chr3L 1481053 intron stet - chr3L 1481105 intron stet - chr3L_7_1480001 chr3L_1480001 RAL-391_75b 327 chr3L 1506015 1506028 chr3L 1513611 1513625 17.6 5 7596 3.0 1.5 2.2 1.6 7610 chr3L 1506015 intron,intron Psa +,cue - chr3L 1509820 intron,intron Psa +,cue - chr3L 1513625 intron,intron Psa +,cue - chr3L_5_1505001 chr3L_1505001 RAL-391_75b 328 chr3L 1682905 1682928 chr3L 1683269 1683292 9 364 0.0 0.0 0.0 9.0 387 chr3L 1682905 intron CG7991 + chr3L 1683098 intron CG7991 + chr3L 1683292 intron CG7991 + chr3L_9_1680001 chr3L_1680001 RAL-391_75b 329 chr3L 1684021 1684046 chr3L 1684099 1684124 5 78 0.0 1.0 0.5 3.3 103 chr3L 1684021 intron CG7991 + chr3L 1684072 intron CG7991 + chr3L 1684124 intron CG7991 + chr3L_5_1680001 chr3L_1680001 RAL-391_75b 330 chr3L 1728516 1728545 chr3L 1728601 1728630 5 85 1.5 2.0 1.8 1.8 114 chr3L 1728516 intron drpr - chr3L 1728573 intron drpr - chr3L 1728630 intron drpr - chr3L_5_1725001 chr3L_1725001 RAL-391_75b 331 chr3L 1805702 1805712 chr3L 1805876 1805886 4 174 0.5 2.5 1.5 1.6 184 chr3L 1805702 exon CG42676 + chr3L 1805794 intron CG42676 + chr3L 1805886 intron CG42676 + chr3L_4_1805001 chr3L_1805001 RAL-391_75b 332 chr3L 1879128 1879140 chr3L 1879206 1879217 4 77 1.5 0.5 1.0 2.0 89 chr3L 1879128 intron CG13937 - chr3L 1879172 intron CG13937 - chr3L 1879217 intron CG13937 - chr3L_4_1875001 chr3L_1875001 RAL-391_75b 333 chr3L 1988839 1988875 chr3L 1989018 1989054 10 179 1.0 2.0 1.5 4.0 215 chr3L 1988839 intergenic not near genes chr3L 1988946 intergenic not near genes chr3L 1989054 intergenic not near genes chr3L_10_1985001 chr3L_1985001 RAL-391_75b 334 chr3L 2168775 2168805 chr3L 2168866 2168896 4 91 0.5 0.5 0.5 2.7 121 chr3L 2168775 exon CG15879 - chr3L 2168836 intron CG15879 - chr3L 2168896 intron CG15879 - chr3L_4_2165001 chr3L_2165001 RAL-391_75b 335 chr3L 2308005 2308026 chr3L 2308111 2308132 5 106 0.5 0.0 0.2 4.2 127 chr3L 2308005 intergenic not near genes chr3L 2308068 intergenic not near genes chr3L 2308132 intergenic not near genes chr3L_5_2305001 chr3L_2305001 RAL-391_75b 336 chr3L 2366101 2366120 chr3L 2366186 2366205 4 85 0.5 1.0 0.8 2.2 104 chr3L 2366101 intergenic not near genes chr3L 2366153 intergenic not near genes chr3L 2366205 intergenic not near genes chr3L_4_2365001 chr3L_2365001 RAL-391_75b 337 chr3L 2447523 2447536 chr3L 2456679 2456692 roo 5 9156 3.5 4.5 4.0 1.0 9169 chr3L 2447523 intron CG45186 + chr3L 2452108 intron CG45186 + chr3L 2456692 intron CG45186 + chr3L_5_2450001 chr3L_2450001 RAL-391_75b 338 chr3L 2533645 2533667 chr3L 2533727 2533749 6 82 4.5 1.0 2.8 1.6 104 chr3L 2533645 intron Spn - chr3L 2533697 intron Spn - chr3L 2533749 intron Spn - chr3L_6_2530001 chr3L_2530001 RAL-391_75b 339 chr3L 2731524 2731546 chr3L 2731606 2731628 5 82 1.0 1.0 1.0 2.5 104 chr3L 2731524 intron Mrtf - chr3L 2731576 intron Mrtf - chr3L 2731628 intron Mrtf - chr3L_5_2730001 chr3L_2730001 RAL-391_75b 340 chr3L 2854484 2854495 chr3L 2854562 2854573 4 78 2.0 2.5 2.2 1.2 89 chr3L 2854484 intron CG43444 - chr3L 2854528 intron CG43444 - chr3L 2854573 intron CG43444 - chr3L_4_2850001 chr3L_2850001 RAL-391_75b 341 chr3L 3061302 3061313 chr3L 3069885 3069896 Tirant 5 8582 1.0 1.5 1.2 2.3 8594 chr3L 3061302 intron CG32486 - chr3L 3065599 intron CG32486 - chr3L 3069896 intron CG32486 - chr3L_5_3065001 chr3L_3065001 RAL-391_75b 342 chr3L 3281446 3281461 chr3L 3281938 3281952 Doc 7 494 4.0 2.5 3.2 1.7 506 chr3L 3281446 intron CG12017 + chr3L 3281699 intron CG12017 + chr3L 3281952 intron CG12017 + chr3L_7_3280001 chr3L_3280001 RAL-391_75b 343 chr3L 3444939 3444964 chr3L 3445062 3445086 7 123 1.0 1.0 1.0 3.5 147 chr3L 3444939 intron eIF5B - chr3L 3445012 intron eIF5B - chr3L 3445086 intron eIF5B - chr3L_7_3445001 chr3L_3445001 RAL-391_75b 344 chr3L 3494155 3494184 chr3L 3494288 3494318 6 134 0.0 2.5 1.2 2.7 163 chr3L 3494155 intron CG42324 + chr3L 3494236 intron CG42324 + chr3L 3494318 intron CG42324 + chr3L_6_3490001 chr3L_3490001 RAL-391_75b 345 chr3L 3551443 3551472 chr3L 3551532 3551561 6 89 0.5 2.0 1.2 2.7 118 chr3L 3551443 intron Eip63E + chr3L 3551502 intron Eip63E + chr3L 3551561 intron Eip63E + chr3L_6_3550001 chr3L_3550001 RAL-391_75b 346 chr3L 3573170 3573191 chr3L 3573253 3573274 4 83 1.0 2.5 1.8 1.4 104 chr3L 3573170 intron Eip63E + chr3L 3573222 intron Eip63E + chr3L 3573274 intron Eip63E + chr3L_4_3570001 chr3L_3570001 RAL-391_75b 347 chr3L 3921400 3921425 chr3L 3921664 3921689 9 264 0.5 2.5 1.5 3.6 289 chr3L 3921400 intron Eip63F-1 - chr3L 3921544 intron Eip63F-1 - chr3L 3921689 intron Eip63F-1 - chr3L_9_3920001 chr3L_3920001 RAL-391_75b 348 chr3L 4162264 4162301 chr3L 4162376 4162413 12 112 0.5 2.0 1.2 5.5 149 chr3L 4162264 exon mas - chr3L 4162338 intron mas - chr3L 4162413 exon mas - chr3L_12_4160001 chr3L_4160001 RAL-391_75b 349 chr3L 4195149 4195166 chr3L 4195253 4195269 6 104 1.5 4.0 2.8 1.6 120 chr3L 4195149 exon CG43367 + chr3L 4195209 intron CG43367 + chr3L 4195269 intron CG43367 + chr3L_6_4195001 chr3L_4195001 RAL-391_75b 350 chr3L 4385640 4385672 chr3L 4385733 4385765 5 93 0.5 1.0 0.8 2.8 125 chr3L 4385640 intron slow + chr3L 4385702 intron slow + chr3L 4385765 intron slow + chr3L_5_4385001 chr3L_4385001 RAL-391_75b 351 chr3L 4732696 4732730 chr3L 4735811 4735845 4 3115 1.0 2.0 1.5 1.6 3149 chr3L 4732696 intron RhoGEF64C + chr3L 4734270 intron RhoGEF64C + chr3L 4735845 intron RhoGEF64C + chr3L_4_4730001 chr3L_4730001 RAL-391_75b 352 chr3L 4858307 4858337 chr3L 4858397 4858427 4 90 1.5 2.0 1.8 1.4 120 chr3L 4858307 intergenic not near genes chr3L 4858367 intergenic not near genes chr3L 4858427 intergenic not near genes chr3L_4_4855001 chr3L_4855001 RAL-391_75b 353 chr3L 4901130 4901153 chr3L 4907320 4907339 diver 4 6189 2.0 3.5 2.8 1.1 6209 chr3L 4901130 intergenic CG13704 + chr3L 4904234 intergenic not near genes chr3L 4907339 intergenic not near genes chr3L_4_4900001 chr3L_4900001 RAL-391_75b 354 chr3L 4991391 4991409 chr3L 4991515 4991533 6 124 2.5 1.0 1.8 2.1 142 chr3L 4991391 intron Con - chr3L 4991462 intron Con - chr3L 4991533 intron Con - chr3L_6_4990001 chr3L_4990001 RAL-391_75b 355 chr3L 5190193 5190212 chr3L 5190317 5190336 4 124 1.0 0.0 0.5 2.7 143 chr3L 5190193 intron shep - chr3L 5190264 intron shep - chr3L 5190336 intron shep - chr3L_4_5190001 chr3L_5190001 RAL-391_75b 356 chr3L 5226505 5226536 chr3L 5226607 5226637 4 102 1.5 1.0 1.2 1.8 132 chr3L 5226505 intron shep - chr3L 5226571 intron shep - chr3L 5226637 intron shep - chr3L_4_5225001 chr3L_5225001 RAL-391_75b 357 chr3L 5902688 5902719 chr3L 5902786 5902817 5 98 1.0 0.5 0.8 2.8 129 chr3L 5902688 intergenic CG32413 -,QC - chr3L 5902752 intergenic CG32413 -,QC - chr3L 5902817 intergenic CG32413 -,QC - chr3L_5_5900001 chr3L_5900001 RAL-391_75b 358 chr3L 5992594 5992608 chr3L 5992696 5992710 4 102 2.0 1.5 1.8 1.4 116 chr3L 5992594 intergenic not near genes chr3L 5992652 intergenic not near genes chr3L 5992710 intergenic not near genes chr3L_4_5990001 chr3L_5990001 RAL-391_75b 359 chr3L 6335014 6335040 chr3L 6335482 6335511 297 7 470 0.5 1.5 1.0 3.5 497 chr3L 6335014 intron CG13300 - chr3L 6335262 intron CG13300 - chr3L 6335511 intron CG13300 - chr3L_7_6335001 chr3L_6335001 RAL-391_75b 360 chr3L 6442168 6442184 chr3L 6442382 6442398 4 214 10.0 9.0 9.5 0.4 230 chr3L 6442168 intron CG42747 + chr3L 6442283 intron CG42747 + chr3L 6442398 intron CG42747 + chr3L_4_6440001 chr3L_6440001 RAL-391_75b 361 chr3L 6632414 6632441 chr3L 6632500 6632528 4 87 1.0 0.0 0.5 2.7 114 chr3L 6632414 intron GluRIA + chr3L 6632471 intron GluRIA + chr3L 6632528 intron GluRIA + chr3L_4_6630001 chr3L_6630001 RAL-391_75b 362 chr3L 7079844 7079874 chr3L 7079998 7080028 8 154 1.5 1.0 1.2 3.6 184 chr3L 7079844 intergenic not near genes chr3L 7079936 intergenic not near genes chr3L 7080028 intergenic not near genes chr3L_8_7075001 chr3L_7075001 RAL-391_75b 363 chr3L 7244931 7244945 chr3L 7245022 7245037 4 92 2.5 0.5 1.5 1.6 106 chr3L 7244931 exon mei-P22 + chr3L 7244984 exon mei-P22 + chr3L 7245037 exon mei-P22 + chr3L_4_7240001 chr3L_7240001 RAL-391_75b 364 chr3L 7377329 7377346 chr3L 7380434 7380451 297 4 3105 1.0 1.5 1.2 1.8 3122 chr3L 7377329 intron SMSr - chr3L 7378890 intron SMSr - chr3L 7380451 intron SMSr - chr3L_4_7375001 chr3L_7375001 RAL-391_75b 365 chr3L 7444022 7444046 chr3L 7444120 7444145 4 98 1.0 0.0 0.5 2.7 123 chr3L 7444022 intron CG42458 + chr3L 7444084 intron CG42458 + chr3L 7444145 intron CG42458 + chr3L_4_7440001 chr3L_7440001 RAL-391_75b 366 chr3L 7572062 7572074 chr3L 7572152 7572166 4 92 3.5 3.0 3.2 1.0 104 chr3L 7572062 intergenic not near genes chr3L 7572114 intergenic not near genes chr3L 7572166 intergenic not near genes chr3L_4_7570001 chr3L_7570001 RAL-391_75b 367 chr3L 7581623 7581631 chr3L 7581707 7581715 4 84 2.0 1.5 1.8 1.4 92 chr3L 7581623 intergenic not near genes chr3L 7581669 intergenic not near genes chr3L 7581715 intergenic not near genes chr3L_4_7580001 chr3L_7580001 RAL-391_75b 368 chr3L 7985361 7985395 chr3L 7987689 7987723 NOF 4 2328 0.5 1.0 0.8 2.2 2362 chr3L 7985361 intron nmo + chr3L 7986542 intron nmo + chr3L 7987723 intron nmo + chr3L_4_7985001 chr3L_7985001 RAL-391_75b 369 chr3L 8056228 8056250 chr3L 8057009 8057031 4 781 9.0 4.5 6.8 0.5 803 chr3L 8056228 intron bip1 - chr3L 8056630 intron bip1 - chr3L 8057031 intron bip1 - chr3L_4_8055001 chr3L_8055001 RAL-391_75b 370 chr3L 8248309 8248344 chr3L 8248399 8248434 8 90 1.5 1.0 1.2 3.6 125 chr3L 8248309 intron Dscam4 + chr3L 8248372 intron Dscam4 + chr3L 8248434 intron Dscam4 + chr3L_8_8245001 chr3L_8245001 RAL-391_75b 371 chr3L 8295794 8295824 chr3L 8295952 8295982 8 158 1.0 1.0 1.0 4.0 188 chr3L 8295794 intergenic CG7201 - chr3L 8295888 intergenic not near genes chr3L 8295982 intergenic not near genes chr3L_8_8295001 chr3L_8295001 RAL-391_75b 372 chr3L 8317596 8317596 chr3L 22908066 22908067 5 14590470 0.0 7.0 3.5 1.1 14590471 chr3L 8317596 intergenic not near genes chr3L 15612832 intergenic CG13449 -,comm3 - chr3L 22908067 intergenic not near genes chr3L_5_15610001 chr3L_15610001 RAL-391_75b 373 chr3L 8606779 8606803 chr3L 8607217 8607241 6 438 0.5 2.5 1.5 2.4 462 chr3L 8606779 intron CG6282 + chr3L 8607010 intron CG6282 + chr3L 8607241 intron CG6282 + chr3L_6_8605001 chr3L_8605001 RAL-391_75b 374 chr3L 8853356 8853368 chr3L 8853437 8853449 5 80 0.5 0.5 0.5 3.3 93 chr3L 8853356 intron dally + chr3L 8853402 intron dally + chr3L 8853449 intron dally + chr3L_5_8850001 chr3L_8850001 RAL-391_75b 375 chr3L 8861531 8861554 chr3L 8861622 8861645 4 90 0.5 0.0 0.2 3.3 114 chr3L 8861531 intron dally + chr3L 8861588 intron dally + chr3L 8861645 intron dally + chr3L_4_8860001 chr3L_8860001 RAL-391_75b 376 chr3L 9013691 9013691 chr3L 18417066 18417066 5 9403375 13.5 9.0 11.2 0.4 9403375 chr3L 9013691 intron Doc2 - chr3L 13715378 intron bru-3 - chr3L 18417066 intergenic not near genes chr3L_5_13715001 chr3L_13715001 RAL-391_75b 377 chr3L 9076925 9076946 chr3L 9084485 9084506 412 5 7560 1.5 2.0 1.8 1.8 7581 chr3L 9076925 exon Tequila + chr3L 9080716 intron Tequila + chr3L 9084506 exon Tequila + chr3L_5_9080001 chr3L_9080001 RAL-391_75b 378 chr3L 9219247 9219258 chr3L 9219918 9219930 jockey 4 672 3.5 2.5 3.0 1.0 683 chr3L 9219247 intergenic not near genes chr3L 9219588 intergenic not near genes chr3L 9219930 intergenic not near genes chr3L_4_9215001 chr3L_9215001 RAL-391_75b 379 chr3L 9270629 9270650 chr3L 9278380 9278401 roo 6 7751 0.0 0.5 0.2 5.0 7772 chr3L 9270629 intron GluRIB + chr3L 9274515 intron GluRIB + chr3L 9278401 exon GluRIB + chr3L_6_9270001 chr3L_9270001 RAL-391_75b 380 chr3L 9689509 9689530 chr3L 9689588 9689610 5 80 2.0 3.0 2.5 1.4 101 chr3L 9689509 intron CG6767 - chr3L 9689560 intron CG6767 - chr3L 9689610 intron CG6767 - chr3L_5_9685001 chr3L_9685001 RAL-391_75b 381 chr3L 9697769 9697798 chr3L 9697861 9697890 6 92 1.5 1.5 1.5 2.4 121 chr3L 9697769 intergenic not near genes chr3L 9697830 intergenic not near genes chr3L 9697890 intergenic UbcD4 + chr3L_6_9695001 chr3L_9695001 RAL-391_75b 382 chr3L 9918879 9918913 chr3L 9918974 9919008 10 95 1.5 2.0 1.8 3.6 129 chr3L 9918879 intron CG34356 + chr3L 9918944 intron CG34356 + chr3L 9919008 intron CG34356 + chr3L_10_9915001 chr3L_9915001 RAL-391_75b 383 chr3L 9998285 9998295 chr3L 9998575 9998586 4 290 1.0 1.0 1.0 2.0 301 chr3L 9998285 intron dpr6 + chr3L 9998436 intron dpr6 + chr3L 9998586 intron dpr6 + chr3L_4_9995001 chr3L_9995001 RAL-391_75b 384 chr3L 10035225 10035247 chr3L 10035312 10035333 4 87 0.0 0.0 0.0 4.0 108 chr3L 10035225 intron dpr6 + chr3L 10035279 intron dpr6 + chr3L 10035333 intron dpr6 + chr3L_4_10035001 chr3L_10035001 RAL-391_75b 385 chr3L 10049541 10049574 chr3L 10049621 10049654 4 80 1.5 0.5 1.0 2.0 113 chr3L 10049541 intron dpr6 + chr3L 10049598 intron dpr6 + chr3L 10049654 intron dpr6 + chr3L_4_10045001 chr3L_10045001 RAL-391_75b 386 chr3L 10127738 10127757 chr3L 10127815 10127834 6 76 1.5 0.0 0.8 3.3 96 chr3L 10127738 intron dpr6 + chr3L 10127786 intron dpr6 + chr3L 10127834 intron dpr6 + chr3L_6_10125001 chr3L_10125001 RAL-391_75b 387 chr3L 10308737 10308772 chr3L 10308814 10308849 9 76 1.5 2.0 1.8 3.2 112 chr3L 10308737 intergenic not near genes chr3L 10308793 intergenic not near genes chr3L 10308849 intergenic not near genes chr3L_9_10305001 chr3L_10305001 RAL-391_75b 388 chr3L 10614462 10614483 chr3L 10614538 10614556 5 76 2.0 3.5 2.8 1.3 94 chr3L 10614462 intergenic not near genes chr3L 10614509 intergenic not near genes chr3L 10614556 intergenic not near genes chr3L_5_10610001 chr3L_10610001 RAL-391_75b 389 chr3L 10658085 10658194 chr3L 10658162 10658321 5 97 0.0 0.0 0.0 5.0 236 chr3L 10658085 intron CG32066 - chr3L 10658203 intron CG32066 - chr3L 10658321 intron CG32066 - chr3L_5_10655001 chr3L_10655001 RAL-391_75b 390 chr3L 11083503 11083536 chr3L 11083601 11083634 6 98 0.5 1.5 1.0 3.0 131 chr3L 11083503 intron JIL-1 - chr3L 11083568 intron JIL-1 - chr3L 11083634 intron JIL-1 - chr3L_6_11080001 chr3L_11080001 RAL-391_75b 391 chr3L 11121597 11121613 chr3L 11123004 11123021 4 1407 14.0 21.5 17.8 0.2 1424 chr3L 11121597 exon mRpL2 + chr3L 11122309 exon Ufd1-like - chr3L 11123021 exon Ufd1-like - chr3L_4_11120001 chr3L_11120001 RAL-391_75b 392 chr3L 11264465 11264488 chr3L 11271417 11271440 17.6 5 6952 1.0 0.5 0.8 2.8 6975 chr3L 11264465 intergenic not near genes chr3L 11267952 intergenic not near genes chr3L 11271440 intergenic not near genes chr3L_5_11265001 chr3L_11265001 RAL-391_75b 393 chr3L 11277457 11277476 chr3L 11278452 11278470 Rt1a 4 995 0.0 0.5 0.2 3.3 1013 chr3L 11277457 intergenic not near genes chr3L 11277964 intergenic not near genes chr3L 11278470 intergenic not near genes chr3L_4_11275001 chr3L_11275001 RAL-391_75b 394 chr3L 11379327 11379347 chr3L 11379405 11379425 7 78 2.0 0.5 1.2 3.2 98 chr3L 11379327 intergenic not near genes chr3L 11379376 intergenic not near genes chr3L 11379425 intergenic not near genes chr3L_7_11375001 chr3L_11375001 RAL-391_75b 395 chr3L 11548862 11548877 chr3L 11548949 11548964 4 87 1.5 1.5 1.5 1.6 102 chr3L 11548862 intron Mob2 - chr3L 11548913 intron Mob2 - chr3L 11548964 intron Mob2 - chr3L_4_11545001 chr3L_11545001 RAL-391_75b 396 chr3L 11564796 11564812 chr3L 11572421 11572437 412 5 7625 2.5 3.5 3.0 1.2 7641 chr3L 11564796 exon CG33267 + chr3L 11568616 intron CG33267 + chr3L 11572437 exon CG33267 + chr3L_5_11565001 chr3L_11565001 RAL-391_75b 397 chr3L 11579559 11579575 chr3L 11579665 11579681 4 106 1.5 1.0 1.2 1.8 122 chr3L 11579559 intergenic CG43390 - chr3L 11579620 intergenic CG43390 - chr3L 11579681 intergenic CG43390 - chr3L_4_11575001 chr3L_11575001 RAL-391_75b 398 chr3L 11740140 11740151 chr3L 11740238 11740249 4 98 8.5 3.5 6.0 0.6 109 chr3L 11740140 intron CG6024 - chr3L 11740194 intron CG6024 - chr3L 11740249 intron CG6024 - chr3L_4_11740001 chr3L_11740001 RAL-391_75b 399 chr3L 11816795 11816817 chr3L 11816895 11816917 7 101 1.0 2.0 1.5 2.8 122 chr3L 11816795 3` UTR CG5946 - chr3L 11816856 3` UTR CG5946 - chr3L 11816917 3` UTR CG5946 - chr3L_7_11815001 chr3L_11815001 RAL-391_75b 400 chr3L 11905131 11905143 chr3L 11905213 11905225 4 82 0.5 1.0 0.8 2.2 94 chr3L 11905131 intron CG44837 - chr3L 11905178 intron CG44837 - chr3L 11905225 intron CG44837 - chr3L_4_11905001 chr3L_11905001 RAL-391_75b 401 chr3L 12052709 12052731 chr3L 12052798 12052819 4 88 0.5 0.0 0.2 3.3 110 chr3L 12052709 intron rols - chr3L 12052764 intron rols - chr3L 12052819 intron rols - chr3L_4_12050001 chr3L_12050001 RAL-391_75b 402 chr3L 12196144 12196158 chr3L 12196393 12196407 4 249 0.5 1.0 0.8 2.2 263 chr3L 12196144 intergenic CR45746 - chr3L 12196276 intergenic CR45746 - chr3L 12196407 intergenic CR45746 - chr3L_4_12195001 chr3L_12195001 RAL-391_75b 403 chr3L 12312485 12312510 chr3L 12312563 12312588 7 78 1.0 0.5 0.8 3.9 103 chr3L 12312485 intergenic not near genes chr3L 12312536 intergenic not near genes chr3L 12312588 intergenic not near genes chr3L_7_12310001 chr3L_12310001 RAL-391_75b 404 chr3L 12353921 12353953 chr3L 12354010 12354042 4 89 0.0 0.5 0.2 3.3 121 chr3L 12353921 intergenic not near genes chr3L 12353982 intergenic not near genes chr3L 12354042 intergenic not near genes chr3L_4_12350001 chr3L_12350001 RAL-391_75b 405 chr3L 12957785 12957819 chr3L 12962267 12962301 copia 10 4482 0.5 0.0 0.2 8.3 4516 chr3L 12957785 intergenic not near genes chr3L 12960043 intergenic not near genes chr3L 12962301 intergenic not near genes chr3L_10_12960001 chr3L_12960001 RAL-391_75b 406 chr3L 13007694 13007935 chr3L 13007773 13008033 4 84 0.5 1.0 0.8 2.2 339 chr3L 13007694 exon CG11263 + chr3L 13007864 3` UTR CG11263 + chr3L 13008033 intergenic CG11263 +,CG14117 + chr3L_4_13005001 chr3L_13005001 RAL-391_75b 407 chr3L 13015733 13015749 chr3L 13015815 13015831 4 82 0.0 1.5 0.8 2.2 98 chr3L 13015733 intergenic CG11267 +,MICAL-like - chr3L 13015782 intergenic CG11267 +,MICAL-like - chr3L 13015831 intergenic CG11267 +,MICAL-like - chr3L_4_13015001 chr3L_13015001 RAL-391_75b 408 chr3L 13074035 13074051 chr3L 13074168 13074184 5 133 2.0 1.5 1.8 1.8 149 chr3L 13074035 intergenic not near genes chr3L 13074110 intergenic not near genes chr3L 13074184 intergenic not near genes chr3L_5_13070001 chr3L_13070001 RAL-391_75b 409 chr3L 13144116 13144135 chr3L 13144193 13144212 4 77 1.0 1.0 1.0 2.0 96 chr3L 13144116 intergenic not near genes chr3L 13144164 intergenic not near genes chr3L 13144212 intergenic not near genes chr3L_4_13140001 chr3L_13140001 RAL-391_75b 410 chr3L 13156335 13156348 chr3L 13156420 13156433 4 85 1.0 3.0 2.0 1.3 98 chr3L 13156335 intergenic not near genes chr3L 13156384 intergenic not near genes chr3L 13156433 intergenic not near genes chr3L_4_13155001 chr3L_13155001 RAL-391_75b 411 chr3L 13194067 13194099 chr3L 13194146 13194178 5 79 0.5 0.5 0.5 3.3 111 chr3L 13194067 intergenic not near genes chr3L 13194122 intergenic not near genes chr3L 13194178 intergenic not near genes chr3L_5_13190001 chr3L_13190001 RAL-391_75b 412 chr3L 13400529 13400545 chr3L 13400604 13400621 6 76 0.5 0.0 0.2 5.0 92 chr3L 13400529 intron sens - chr3L 13400575 intron sens - chr3L 13400621 intron sens - chr3L_6_13400001 chr3L_13400001 RAL-391_75b 413 chr3L 13525155 13525175 chr3L 13532951 13532970 roo 5 7796 4.0 4.0 4.0 1.0 7815 chr3L 13525155 intergenic not near genes chr3L 13529062 intergenic not near genes chr3L 13532970 intergenic not near genes chr3L_5_13525001 chr3L_13525001 RAL-391_75b 414 chr3L 13633422 13633444 chr3L 13633775 13633798 5 354 0.0 1.5 0.8 2.8 376 chr3L 13633422 intron bru-3 - chr3L 13633610 intron bru-3 - chr3L 13633798 intron bru-3 - chr3L_5_13630001 chr3L_13630001 RAL-391_75b 415 chr3L 13648887 13648912 chr3L 13648977 13649002 6 90 1.5 1.5 1.5 2.4 115 chr3L 13648887 intron bru-3 - chr3L 13648944 intron bru-3 - chr3L 13649002 intron bru-3 - chr3L_6_13645001 chr3L_13645001 RAL-391_75b 416 chr3L 13901572 13901601 chr3L 13901649 13901678 6 77 2.5 2.0 2.2 1.9 106 chr3L 13901572 intron dysc - chr3L 13901625 intron dysc - chr3L 13901678 intron dysc - chr3L_6_13900001 chr3L_13900001 RAL-391_75b 417 chr3L 13948632 13948655 chr3L 13948710 13948733 5 78 0.5 2.5 1.5 2.0 101 chr3L 13948632 intron CG32137 + chr3L 13948682 intron CG32137 + chr3L 13948733 intron CG32137 + chr3L_5_13945001 chr3L_13945001 RAL-391_75b 418 chr3L 14194294 14194320 chr3L 14194405 14194431 4 111 1.5 2.0 1.8 1.4 137 chr3L 14194294 intron nuf + chr3L 14194362 intron nuf + chr3L 14194431 intron nuf + chr3L_4_14190001 chr3L_14190001 RAL-391_75b 419 chr3L 14245569 14245590 chr3L 14245659 14245684 1360 4 93 3.0 0.0 1.5 1.6 115 chr3L 14245569 3` UTR CR44561 - chr3L 14245626 3` UTR CR44561 - chr3L 14245684 3` UTR CR44561 - chr3L_4_14245001 chr3L_14245001 RAL-391_75b 420 chr3L 14282587 14282607 chr3L 14282667 14282687 5 80 2.5 5.0 3.8 1.0 100 chr3L 14282587 intron fz + chr3L 14282637 intron fz + chr3L 14282687 intron fz + chr3L_5_14280001 chr3L_14280001 RAL-391_75b 421 chr3L 14295984 14296006 chr3L 14296470 14296492 roo 4 486 3.0 2.0 2.5 1.1 508 chr3L 14295984 intron fz + chr3L 14296238 intron fz + chr3L 14296492 intron fz + chr3L_4_14295001 chr3L_14295001 RAL-391_75b 422 chr3L 14468448 14468472 chr3L 14473654 14473678 copia 5 5206 1.0 3.5 2.2 1.6 5230 chr3L 14468448 intron bbg - chr3L 14471063 intron bbg - chr3L 14473678 intron bbg - chr3L_5_14470001 chr3L_14470001 RAL-391_75b 423 chr3L 14516171 14516182 chr3L 14516247 14516257 4 76 0.5 1.0 0.8 2.2 86 chr3L 14516171 intron bbg - chr3L 14516214 intron bbg - chr3L 14516257 intron bbg - chr3L_4_14515001 chr3L_14515001 RAL-391_75b 424 chr3L 14741143 14741159 chr3L 14741221 14741237 4 78 1.0 1.5 1.2 1.8 94 chr3L 14741143 intron ome + chr3L 14741190 intron ome + chr3L 14741237 intron ome + chr3L_4_14740001 chr3L_14740001 RAL-391_75b 425 chr3L 15444650 15444680 chr3L 15444744 15444774 6 93 2.0 1.0 1.5 2.4 124 chr3L 15444650 intergenic not near genes chr3L 15444712 intergenic not near genes chr3L 15444774 intergenic not near genes chr3L_6_15440001 chr3L_15440001 RAL-391_75b 426 chr3L 15695982 15696009 chr3L 15696060 15696087 5 78 0.5 1.0 0.8 2.8 105 chr3L 15695982 intergenic not near genes chr3L 15696034 intergenic not near genes chr3L 15696087 intergenic not near genes chr3L_5_15695001 chr3L_15695001 RAL-391_75b 427 chr3L 15775832 15775860 chr3L 15775909 15775936 5 77 1.0 1.5 1.2 2.3 104 chr3L 15775832 intergenic not near genes chr3L 15775884 intergenic not near genes chr3L 15775936 intergenic not near genes chr3L_5_15775001 chr3L_15775001 RAL-391_75b 428 chr3L 15819029 15819061 chr3L 15819112 15819144 4 83 0.5 1.0 0.8 2.2 115 chr3L 15819029 3` UTR Dcp2 - chr3L 15819086 3` UTR Dcp2 - chr3L 15819144 3` UTR Dcp2 - chr3L_4_15815001 chr3L_15815001 RAL-391_75b 429 chr3L 15880596 15880608 chr3L 15880676 15880688 4 80 2.5 0.5 1.5 1.6 92 chr3L 15880596 intron pHCl - chr3L 15880642 intron pHCl - chr3L 15880688 intron pHCl - chr3L_4_15880001 chr3L_15880001 RAL-391_75b 430 chr3L 15899234 15899261 chr3L 15899801 15899827 jockey 6 567 1.0 2.5 1.8 2.1 593 chr3L 15899234 intergenic pHCl - chr3L 15899530 intergenic not near genes chr3L 15899827 intergenic sff - chr3L_6_15895001 chr3L_15895001 RAL-391_75b 431 chr3L 15939854 15939882 chr3L 15939930 15939957 6 76 0.0 0.0 0.0 6.0 103 chr3L 15939854 intron Pka-C3 - chr3L 15939906 intron Pka-C3 - chr3L 15939957 intron Pka-C3 - chr3L_6_15935001 chr3L_15935001 RAL-391_75b 432 chr3L 15975520 15975551 chr3L 15975673 15975706 6 154 3.0 2.0 2.5 1.7 186 chr3L 15975520 intron,exon brm -,CG17026 + chr3L 15975613 intron,exon brm -,CG17026 + chr3L 15975706 intron,exon brm -,CG17026 + chr3L_6_15975001 chr3L_15975001 RAL-391_75b 433 chr3L 16267203 16267232 chr3L 16267290 16267319 7 86 3.0 2.0 2.5 2.0 116 chr3L 16267203 exon CG4950 - chr3L 16267261 exon CG4950 - chr3L 16267319 exon CG4950 - chr3L_7_16265001 chr3L_16265001 RAL-391_75b 434 chr3L 16315321 16315353 chr3L 16316165 16316197 4 844 9.5 10.5 10.0 0.4 876 chr3L 16315321 intergenic CG13062 + chr3L 16315759 intergenic not near genes chr3L 16316197 intergenic not near genes chr3L_4_16315001 chr3L_16315001 RAL-391_75b 435 chr3L 16493978 16494006 chr3L 16494495 16494523 jockey 6 517 1.0 1.5 1.2 2.7 545 chr3L 16493978 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494250 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494523 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_6_16490001 chr3L_16490001 RAL-391_75b 436 chr3L 16560305 16560331 chr3L 16560389 16560416 4 84 1.5 1.5 1.5 1.6 111 chr3L 16560305 intergenic not near genes chr3L 16560360 intergenic not near genes chr3L 16560416 intergenic not near genes chr3L_4_16560001 chr3L_16560001 RAL-391_75b 437 chr3L 16610692 16610716 chr3L 16610777 16610801 7 85 1.0 1.0 1.0 3.5 109 chr3L 16610692 3` UTR Su(P) - chr3L 16610746 exon Su(P) - chr3L 16610801 exon Su(P) - chr3L_7_16610001 chr3L_16610001 RAL-391_75b 438 chr3L 16616517 16616539 chr3L 16621845 16621867 297 5 5328 0.5 1.5 1.0 2.5 5350 chr3L 16616517 3` UTR Abl - chr3L 16619192 3` UTR Abl - chr3L 16621867 3` UTR Abl - chr3L_5_16615001 chr3L_16615001 RAL-391_75b 439 chr3L 16945728 16945756 chr3L 16954881 16954909 roo 10 9153 2.0 0.0 1.0 5.0 9181 chr3L 16945728 exon Obp73a + chr3L 16950318 intergenic not near genes chr3L 16954909 5` UTR Nc73EF + chr3L_10_16950001 chr3L_16950001 RAL-391_75b 440 chr3L 17027174 17027187 chr3L 17027266 17027279 4 92 0.0 0.5 0.2 3.3 105 chr3L 17027174 intergenic Fit2 +,CG7730 + chr3L 17027226 intergenic Fit2 +,CG7730 + chr3L 17027279 intergenic Fit2 +,CG7730 + chr3L_4_17025001 chr3L_17025001 RAL-391_75b 441 chr3L 17085009 17085032 chr3L 17094158 17094181 roo 5 9149 1.5 2.0 1.8 1.8 9172 chr3L 17085009 intron Rbp6 - chr3L 17089595 intron Rbp6 - chr3L 17094181 intron Rbp6 - chr3L_5_17085001 chr3L_17085001 RAL-391_75b 442 chr3L 17149176 17149185 chr3L 17149257 17149265 5 81 3.0 0.0 1.5 2.0 89 chr3L 17149176 intron Rbp6 - chr3L 17149220 intron Rbp6 - chr3L 17149265 intron Rbp6 - chr3L_5_17145001 chr3L_17145001 RAL-391_75b 443 chr3L 17316455 17316479 chr3L 17316567 17316591 6 112 1.0 1.5 1.2 2.7 136 chr3L 17316455 intergenic not near genes chr3L 17316523 intergenic not near genes chr3L 17316591 intergenic not near genes chr3L_6_17315001 chr3L_17315001 RAL-391_75b 444 chr3L 17516983 17517011 chr3L 17524541 17524569 412 6 7557 1.5 0.5 1.0 3.0 7586 chr3L 17516983 intron CG7564 + chr3L 17520776 intron CG7564 + chr3L 17524569 3` UTR CG7564 + chr3L_6_17520001 chr3L_17520001 RAL-391_75b 445 chr3L 17659723 17659756 chr3L 17659800 17659833 5 76 0.5 1.0 0.8 2.8 110 chr3L 17659723 intergenic Crtc - chr3L 17659778 intergenic Crtc - chr3L 17659833 3` UTR Crtc - chr3L_5_17655001 chr3L_17655001 RAL-391_75b 446 chr3L 17837626 17837655 chr3L 17837714 17837743 9 88 1.0 1.5 1.2 4.1 117 chr3L 17837626 exon Grd + chr3L 17837684 intron Grd + chr3L 17837743 exon Grd + chr3L_9_17835001 chr3L_17835001 RAL-391_75b 447 chr3L 17926073 17926080 chr3L 17926285 17926292 4 212 0.0 2.0 1.0 2.0 219 chr3L 17926073 intergenic not near genes chr3L 17926182 intergenic not near genes chr3L 17926292 intergenic not near genes chr3L_4_17925001 chr3L_17925001 RAL-391_75b 448 chr3L 18092785 18092804 chr3L 18092900 18092919 4 115 1.0 0.0 0.5 2.7 134 chr3L 18092785 intron CG13698 - chr3L 18092852 intron CG13698 - chr3L 18092919 intron CG13698 - chr3L_4_18090001 chr3L_18090001 RAL-391_75b 449 chr3L 18738664 18738693 chr3L 18738752 18738781 4 88 1.5 1.0 1.2 1.8 117 chr3L 18738664 intergenic not near genes chr3L 18738722 intergenic not near genes chr3L 18738781 intergenic not near genes chr3L_4_18735001 chr3L_18735001 RAL-391_75b 450 chr3L 18772424 18772440 chr3L 18781104 18781121 roo 5 8681 0.0 0.5 0.2 4.2 8697 chr3L 18772424 intron ftz-f1 - chr3L 18776772 intron ftz-f1 - chr3L 18781121 intron ftz-f1 - chr3L_5_18775001 chr3L_18775001 RAL-391_75b 451 chr3L 18832618 18832644 chr3L 18832696 18832716 5 77 0.0 1.0 0.5 3.3 98 chr3L 18832618 intron Indy - chr3L 18832667 intron Indy - chr3L 18832716 intron Indy - chr3L_5_18830001 chr3L_18830001 RAL-391_75b 452 chr3L 18833781 18833809 chr3L 18834945 18834972 1360 4 1164 0.5 0.0 0.2 3.3 1191 chr3L 18833781 intron Indy - chr3L 18834376 intron Indy - chr3L 18834972 intron Indy - chr3L_4_18830001 chr3L_18830001 RAL-391_75b 453 chr3L 18839744 18839766 chr3L 18839827 18839849 5 83 1.0 4.0 2.5 1.4 105 chr3L 18839744 intron Indy - chr3L 18839796 intron Indy - chr3L 18839849 intron Indy - chr3L_5_18835001 chr3L_18835001 RAL-391_75b 454 chr3L 18969551 18969566 chr3L 18969627 18969641 7 76 1.5 2.0 1.8 2.5 90 chr3L 18969551 intergenic not near genes chr3L 18969596 intergenic not near genes chr3L 18969641 intergenic not near genes chr3L_7_18965001 chr3L_18965001 RAL-391_75b 455 chr3L 19025940 19025965 chr3L 19026023 19026049 5 84 0.0 0.0 0.0 5.0 109 chr3L 19025940 intron nkd - chr3L 19025994 intron nkd - chr3L 19026049 intron nkd - chr3L_5_19025001 chr3L_19025001 RAL-391_75b 456 chr3L 19082039 19082052 chr3L 19082141 19082152 6 102 2.0 1.5 1.8 2.1 113 chr3L 19082039 intron Mkp3 - chr3L 19082096 intron Mkp3 - chr3L 19082152 intron Mkp3 - chr3L_6_19080001 chr3L_19080001 RAL-391_75b 457 chr3L 19138554 19138580 chr3L 19138635 19138661 5 81 1.5 0.5 1.0 2.5 107 chr3L 19138554 intron CG14082 - chr3L 19138608 intron CG14082 - chr3L 19138661 intron CG14082 - chr3L_5_19135001 chr3L_19135001 RAL-391_75b 458 chr3L 19238728 19238752 chr3L 19238835 19238859 5 107 1.0 1.0 1.0 2.5 131 chr3L 19238728 intergenic not near genes chr3L 19238794 intergenic not near genes chr3L 19238859 intergenic not near genes chr3L_5_19235001 chr3L_19235001 RAL-391_75b 459 chr3L 19269834 19269847 chr3L 19270038 19270051 4 204 0.5 3.0 1.8 1.4 217 chr3L 19269834 intron,exon CG14085 +,CG14088 - chr3L 19269942 intron,exon CG14085 +,CG14088 - chr3L 19270051 intron,exon CG14085 +,CG14088 - chr3L_4_19265001 chr3L_19265001 RAL-391_75b 460 chr3L 19323595 19323624 chr3L 19323758 19323787 5 163 0.5 1.5 1.0 2.5 192 chr3L 19323595 intron pip - chr3L 19323691 intron pip - chr3L 19323787 intron pip - chr3L_5_19320001 chr3L_19320001 RAL-391_75b 461 chr3L 19426749 19426782 chr3L 19426827 19426860 4 78 0.0 3.0 1.5 1.6 111 chr3L 19426749 intergenic not near genes chr3L 19426804 intergenic not near genes chr3L 19426860 intergenic not near genes chr3L_4_19425001 chr3L_19425001 RAL-391_75b 462 chr3L 19600340 19600366 chr3L 19601386 19601414 8 1046 20.0 9.5 14.8 0.5 1074 chr3L 19600340 exon Taf6 + chr3L 19600877 intron Taf6 + chr3L 19601414 intergenic Taf6 +,CG9368 + chr3L_8_19600001 chr3L_19600001 RAL-391_75b 463 chr3L 20150731 20150757 chr3L 20150862 20150888 5 131 0.5 1.5 1.0 2.5 157 chr3L 20150731 3` UTR CG42674 - chr3L 20150810 3` UTR CG42674 - chr3L 20150888 3` UTR CG42674 - chr3L_5_20150001 chr3L_20150001 RAL-391_75b 464 chr3L 20257335 20257359 chr3L 20258455 20258479 pogo 4 1120 0.0 1.0 0.5 2.7 1144 chr3L 20257335 intron rdgC + chr3L 20257907 intron rdgC + chr3L 20258479 intron rdgC + chr3L_4_20255001 chr3L_20255001 RAL-391_75b 465 chr3L 20444119 20444149 chr3L 20444206 20444236 4 86 0.0 0.5 0.2 3.3 117 chr3L 20444119 intron CG5910 + chr3L 20444178 intron CG5910 + chr3L 20444236 intron CG5910 + chr3L_4_20440001 chr3L_20440001 RAL-391_75b 466 chr3L 20624611 20624646 chr3L 20624697 20624732 5 86 1.0 1.0 1.0 2.5 121 chr3L 20624611 intergenic CR44684 - chr3L 20624672 intergenic CR44684 - chr3L 20624732 intergenic CR44684 - chr3L_5_20620001 chr3L_20620001 RAL-391_75b 467 chr3L 20668449 20668483 chr3L 20668525 20668560 5 77 1.5 1.0 1.2 2.3 111 chr3L 20668449 intergenic not near genes chr3L 20668504 intergenic not near genes chr3L 20668560 intergenic not near genes chr3L_5_20665001 chr3L_20665001 RAL-391_75b 468 chr3L 20849271 20849292 chr3L 20849350 20849371 5 79 0.0 0.0 0.0 5.0 100 chr3L 20849271 intron CG32432 - chr3L 20849321 intron CG32432 - chr3L 20849371 intron CG32432 - chr3L_5_20845001 chr3L_20845001 RAL-391_75b 469 chr3L 20913749 20913776 chr3L 20913829 20913858 6 81 1.0 0.5 0.8 3.3 109 chr3L 20913749 intergenic CR43930 - chr3L 20913804 intergenic CR43930 - chr3L 20913858 intergenic CR43930 - chr3L_6_20910001 chr3L_20910001 RAL-391_75b 470 chr3L 21014918 21014944 chr3L 21023399 21023425 Tirant 7 8480 2.0 1.0 1.5 2.8 8507 chr3L 21014918 intron skd - chr3L 21019172 intron skd - chr3L 21023425 intron skd - chr3L_7_21015001 chr3L_21015001 RAL-391_75b 471 chr3L 21082209 21082227 chr3L 21082287 21082305 5 78 0.0 2.0 1.0 2.5 96 chr3L 21082209 intron ko - chr3L 21082257 intron ko - chr3L 21082305 intron ko - chr3L_5_21080001 chr3L_21080001 RAL-391_75b 472 chr3L 21172857 21172873 chr3L 21172960 21172976 6 103 0.0 2.0 1.0 3.0 119 chr3L 21172857 5` UTR chb + chr3L 21172916 5` UTR chb + chr3L 21172976 5` UTR chb + chr3L_6_21170001 chr3L_21170001 RAL-391_75b 473 chr3L 21301731 21301764 chr3L 21301817 21301850 9 86 1.0 2.5 1.8 3.2 119 chr3L 21301731 5` UTR CR45432 + chr3L 21301790 5` UTR,3` UTR CR45432 +,CG11309 - chr3L 21301850 5` UTR,3` UTR CR45432 +,CG11309 - chr3L_9_21300001 chr3L_21300001 RAL-391_75b 474 chr3L 21362853 21362883 chr3L 21362937 21362967 6 84 1.0 0.5 0.8 3.3 114 chr3L 21362853 intergenic not near genes chr3L 21362910 intergenic not near genes chr3L 21362967 intergenic not near genes chr3L_6_21360001 chr3L_21360001 RAL-391_75b 475 chr3L 21395141 21395171 chr3L 21395229 21395259 5 87 2.0 3.0 2.5 1.4 118 chr3L 21395141 intron rgn + chr3L 21395200 intron rgn + chr3L 21395259 intron rgn + chr3L_5_21395001 chr3L_21395001 RAL-391_75b 476 chr3L 21766926 21766940 chr3L 21767207 21767221 5 281 2.5 1.0 1.8 1.8 295 chr3L 21766926 intron Syn1 - chr3L 21767074 intron Syn1 - chr3L 21767221 intron Syn1 - chr3L_5_21765001 chr3L_21765001 RAL-391_75b 477 chr3L 21788605 21788630 chr3L 21788689 21788715 4 85 0.0 0.5 0.2 3.3 110 chr3L 21788605 intergenic not near genes chr3L 21788660 intergenic not near genes chr3L 21788715 intergenic not near genes chr3L_4_21785001 chr3L_21785001 RAL-391_75b 478 chr3L 22131296 22131326 chr3L 22131373 22131403 8 77 1.5 0.5 1.0 4.0 107 chr3L 22131296 intergenic not near genes chr3L 22131350 intergenic not near genes chr3L 22131403 intergenic not near genes chr3L_8_22130001 chr3L_22130001 RAL-391_75b 479 chr3L 22328060 22328087 chr3L 22328159 22328186 5 99 0.5 1.0 0.8 2.8 126 chr3L 22328060 intron Ten-m - chr3L 22328123 intron Ten-m - chr3L 22328186 intron Ten-m - chr3L_5_22325001 chr3L_22325001 RAL-391_75b 480 chr3L 22507129 22507154 chr3L 22507216 22507240 5 86 2.0 1.0 1.5 2.0 111 chr3L 22507129 intergenic not near genes chr3L 22507184 intergenic not near genes chr3L 22507240 intergenic not near genes chr3L_5_22505001 chr3L_22505001 RAL-391_75b 481 chr3L 22549602 22549631 chr3L 22549723 22549752 4 120 1.5 2.0 1.8 1.4 150 chr3L 22549602 intergenic CG11404 + chr3L 22549677 intergenic CG11404 + chr3L 22549752 intergenic CG11404 +,Trxr-2 + chr3L_4_22545001 chr3L_22545001 RAL-391_75b 482 chr3L 22577614 22577643 chr3L 22582402 22582431 Doc 7 4788 3.0 2.5 2.8 1.8 4817 chr3L 22577614 intergenic not near genes chr3L 22580022 intergenic not near genes chr3L 22582431 3` UTR CG14459 - chr3L_7_22580001 chr3L_22580001 RAL-391_75b 483 chr3L 22617189 22617208 chr3L 22624641 22624660 blood 4 7452 3.0 1.0 2.0 1.3 7471 chr3L 22617189 intron CG14459 - chr3L 22620924 intron CG14459 - chr3L 22624660 intron CG14459 - chr3L_4_22620001 chr3L_22620001 RAL-391_75b 484 chr3L 22756398 22756429 chr3L 22756474 22756506 4 76 1.0 2.0 1.5 1.6 108 chr3L 22756398 intron SPoCk + chr3L 22756452 intron SPoCk + chr3L 22756506 intron SPoCk + chr3L_4_22755001 chr3L_22755001 RAL-391_75b 485 chr3L 22771646 22771661 chr3L 22771728 22771743 8 81 1.5 1.5 1.5 3.2 97 chr3L 22771646 intron SPoCk + chr3L 22771694 intron SPoCk + chr3L 22771743 intron SPoCk + chr3L_8_22770001 chr3L_22770001 RAL-391_75b 486 chr3L 22897196 22897225 chr3L 22897279 22897308 7 83 1.0 2.5 1.8 2.5 112 chr3L 22897196 intergenic not near genes chr3L 22897252 intergenic not near genes chr3L 22897308 intergenic not near genes chr3L_7_22895001 chr3L_22895001 RAL-391_75b 487 chr3L 24008391 24008413 chr3L 24008620 24008642 4 229 4.0 6.0 5.0 0.7 251 chr3L 24008391 intergenic not near genes chr3L 24008516 intergenic not near genes chr3L 24008642 intergenic not near genes chr3L_4_24005001 chr3L_24005001 RAL-391_75b 488 chr3L 24168787 24168822 chr3L 24176114 24176150 ZAM 5 7328 0.5 0.5 0.5 3.3 7363 chr3L 24168787 intron Snap25 + chr3L 24172468 intron Snap25 + chr3L 24176150 intron Snap25 + chr3L_5_24170001 chr3L_24170001 RAL-391_75b 489 chr3L 27421648 27421670 chr3L 27422959 27422981 4 1310 2.0 1.5 1.8 1.4 1333 chr3L 27421648 intron Dbp80 + chr3L 27422314 intergenic Dbp80 + chr3L 27422981 intergenic not near genes chr3L_4_27420001 chr3L_27420001 RAL-391_75b 490 chr3R 2534142 2534163 chr3R 2541710 2541731 4 7568 4.5 7.0 5.8 0.6 7589 chr3R 2534142 intergenic not near genes chr3R 2537936 intergenic not near genes chr3R 2541731 intergenic not near genes chr3R_4_2535001 chr3R_2535001 RAL-391_75b 491 chr3R 4733684 4733704 chr3R 4733808 4733827 4 124 2.0 2.0 2.0 1.3 143 chr3R 4733684 intergenic not near genes chr3R 4733756 intergenic not near genes chr3R 4733827 intergenic not near genes chr3R_4_4730001 chr3R_4730001 RAL-391_75b 492 chr3R 4796114 4796144 chr3R 4796237 4796267 5 123 0.5 1.5 1.0 2.5 153 chr3R 4796114 intron ctrip - chr3R 4796190 intron ctrip - chr3R 4796267 intron ctrip - chr3R_5_4795001 chr3R_4795001 RAL-391_75b 493 chr3R 4861565 4861597 chr3R 4861646 4861678 8 80 0.5 2.0 1.2 3.6 113 chr3R 4861565 intron opa + chr3R 4861622 intron opa + chr3R 4861678 intron opa + chr3R_8_4860001 chr3R_4860001 RAL-391_75b 494 chr3R 5045845 5045874 chr3R 5052947 5052976 HMS-Beagle 4 7102 2.5 0.5 1.5 1.6 7131 chr3R 5045845 intron CR43635 - chr3R 5049410 intergenic not near genes chr3R 5052976 intergenic CR45588 - chr3R_4_5045001 chr3R_5045001 RAL-391_75b 495 chr3R 5067995 5068003 chr3R 5073512 5073520 mdg3 4 5517 2.5 2.0 2.2 1.2 5525 chr3R 5067995 intergenic not near genes chr3R 5070758 intergenic not near genes chr3R 5073520 intergenic not near genes chr3R_4_5070001 chr3R_5070001 RAL-391_75b 496 chr3R 5105551 5105569 chr3R 5105634 5105652 4 83 4.0 3.5 3.8 0.8 101 chr3R 5105551 intergenic not near genes chr3R 5105602 intergenic not near genes chr3R 5105652 intergenic not near genes chr3R_4_5105001 chr3R_5105001 RAL-391_75b 497 chr3R 5236222 5236242 chr3R 5236350 5236370 4 128 1.5 3.5 2.5 1.1 148 chr3R 5236222 3` UTR,3` UTR Mms19 +,rtp - chr3R 5236296 3` UTR rtp - chr3R 5236370 3` UTR rtp - chr3R_4_5235001 chr3R_5235001 RAL-391_75b 498 chr3R 5278095 5278116 chr3R 5278176 5278197 8 81 0.5 0.5 0.5 5.3 102 chr3R 5278095 intron mtd - chr3R 5278146 intron mtd - chr3R 5278197 intron mtd - chr3R_8_5275001 chr3R_5275001 RAL-391_75b 499 chr3R 5338399 5338429 chr3R 5343572 5343606 Rt1c 4 5176 1.0 0.5 0.8 2.2 5207 chr3R 5338399 intron mtd - chr3R 5341002 intron mtd - chr3R 5343606 intron mtd - chr3R_4_5340001 chr3R_5340001 RAL-391_75b 500 chr3R 5712084 5712098 chr3R 5712171 5712186 4 88 1.5 1.5 1.5 1.6 102 chr3R 5712084 3` UTR plx + chr3R 5712135 3` UTR plx + chr3R 5712186 3` UTR plx + chr3R_4_5710001 chr3R_5710001 RAL-391_75b 501 chr3R 5746016 5746044 chr3R 5746257 5746285 pogo 4 241 1.5 2.0 1.8 1.4 269 chr3R 5746016 3` UTR Madm + chr3R 5746150 3` UTR Madm + chr3R 5746285 3` UTR Madm + chr3R_4_5745001 chr3R_5745001 RAL-391_75b 502 chr3R 5809115 5809145 chr3R 5809356 5809386 pogo 4 240 1.0 1.0 1.0 2.0 271 chr3R 5809115 3` UTR CG11000 + chr3R 5809250 3` UTR CG11000 + chr3R 5809386 3` UTR CG11000 + chr3R_4_5805001 chr3R_5805001 RAL-391_75b 503 chr3R 5896965 5896999 chr3R 5897324 5897358 5 359 2.0 0.5 1.2 2.3 393 chr3R 5896965 intron CG34113 - chr3R 5897162 intron CG34113 - chr3R 5897358 intron CG34113 - chr3R_5_5895001 chr3R_5895001 RAL-391_75b 504 chr3R 6015965 6015992 chr3R 6024445 6024472 Tirant 5 8481 1.5 0.5 1.0 2.5 8507 chr3R 6015965 intergenic not near genes chr3R 6020218 intergenic not near genes chr3R 6024472 intergenic not near genes chr3R_5_6020001 chr3R_6020001 RAL-391_75b 505 chr3R 6158508 6158542 chr3R 6167091 6167125 Tirant 4 8583 1.5 1.5 1.5 1.6 8617 chr3R 6158508 intergenic not near genes chr3R 6162816 intergenic not near genes chr3R 6167125 intergenic CG1077 + chr3R_4_6160001 chr3R_6160001 RAL-391_75b 506 chr3R 6737500 6737519 chr3R 6739287 6739306 Doc 7 1787 3.0 1.5 2.2 2.2 1806 chr3R 6737500 intron pb - chr3R 6738403 intron pb - chr3R 6739306 intron pb - chr3R_7_6735001 chr3R_6735001 RAL-391_75b 507 chr3R 6991183 6991204 chr3R 6991259 6991280 5 76 0.5 0.0 0.2 4.2 97 chr3R 6991183 intron Antp - chr3R 6991232 intron Antp - chr3R 6991280 intron Antp - chr3R_5_6990001 chr3R_6990001 RAL-391_75b 508 chr3R 7552965 7552998 chr3R 7553053 7553086 5 88 0.0 0.0 0.0 5.0 121 chr3R 7552965 intergenic not near genes chr3R 7553026 intergenic not near genes chr3R 7553086 intergenic not near genes chr3R_5_7550001 chr3R_7550001 RAL-391_75b 509 chr3R 7642601 7642627 chr3R 7642969 7642995 5 368 0.5 1.5 1.0 2.5 394 chr3R 7642601 intergenic not near genes chr3R 7642798 intergenic not near genes chr3R 7642995 intergenic not near genes chr3R_5_7640001 chr3R_7640001 RAL-391_75b 510 chr3R 7684943 7684973 chr3R 7685255 7685285 8 312 3.5 3.5 3.5 1.8 342 chr3R 7684943 intron Nlg1 + chr3R 7685114 intron Nlg1 + chr3R 7685285 intron Nlg1 + chr3R_8_7685001 chr3R_7685001 RAL-391_75b 511 chr3R 7729476 7729492 chr3R 7737414 7737429 Stalker2 4 7938 0.5 1.0 0.8 2.2 7953 chr3R 7729476 intergenic not near genes chr3R 7733452 intergenic not near genes chr3R 7737429 intergenic not near genes chr3R_4_7730001 chr3R_7730001 RAL-391_75b 512 chr3R 7760272 7760287 chr3R 7760780 7760796 5 508 1.0 2.0 1.5 2.0 524 chr3R 7760272 intron Sp7 + chr3R 7760534 intron Sp7 + chr3R 7760796 5` UTR Sp7 + chr3R_5_7760001 chr3R_7760001 RAL-391_75b 513 chr3R 7821714 7821747 chr3R 7821810 7821841 6 96 1.0 0.5 0.8 3.3 127 chr3R 7821714 intron CG34384 + chr3R 7821778 intron CG34384 + chr3R 7821841 intron CG34384 + chr3R_6_7820001 chr3R_7820001 RAL-391_75b 514 chr3R 7857647 7857673 chr3R 7857730 7857756 7 83 1.0 0.0 0.5 4.7 109 chr3R 7857647 3` UTR CG17816 - chr3R 7857702 3` UTR CG17816 - chr3R 7857756 3` UTR CG17816 - chr3R_7_7855001 chr3R_7855001 RAL-391_75b 515 chr3R 8094412 8094421 chr3R 8099717 8099725 Transpac 4 5305 1.5 0.5 1.0 2.0 5313 chr3R 8094412 intron CG7900 + chr3R 8097068 intron CG7900 + chr3R 8099725 intron CG7900 + chr3R_4_8095001 chr3R_8095001 RAL-391_75b 516 chr3R 8101763 8101788 chr3R 8104847 8104872 G2 4 3084 1.0 0.0 0.5 2.7 3109 chr3R 8101763 exon CG7900 + chr3R 8103318 intron CG7900 + chr3R 8104872 3` UTR CG7900 + chr3R_4_8100001 chr3R_8100001 RAL-391_75b 517 chr3R 8207561 8207587 chr3R 8208406 8208430 F-element 4 844 0.5 1.5 1.0 2.0 869 chr3R 8207561 intergenic not near genes chr3R 8207996 intergenic not near genes chr3R 8208430 intergenic not near genes chr3R_4_8205001 chr3R_8205001 RAL-391_75b 518 chr3R 8303573 8303603 chr3R 8305315 8305345 4 1741 10.0 11.5 10.8 0.3 1772 chr3R 8303573 exon nac - chr3R 8304459 3` UTR Sgt1 - chr3R 8305345 intergenic Sgt1 - chr3R_4_8300001 chr3R_8300001 RAL-391_75b 519 chr3R 8303185 8303202 chr3R 8305420 8305437 5 2236 16.0 11.5 13.8 0.3 2252 chr3R 8303185 exon nac - chr3R 8304311 3` UTR Sgt1 - chr3R 8305437 intergenic Sgt1 - chr3R_5_8300001 chr3R_8300001 RAL-391_75b 520 chr3R 8326543 8326575 chr3R 8326641 8326673 8 97 0.5 3.5 2.0 2.7 130 chr3R 8326543 intron Poxm - chr3R 8326608 intron Poxm - chr3R 8326673 intron Poxm - chr3R_8_8325001 chr3R_8325001 RAL-391_75b 521 chr3R 8339240 8339246 chr3R 21907534 21907535 12 13568290 9.0 11.5 10.2 1.1 13568295 chr3R 8339240 intergenic not near genes chr3R 15123388 intron CG42788 - chr3R 21907535 intergenic CG6678 + chr3R_12_15120001 chr3R_15120001 RAL-391_75b 522 chr3R 8339247 8339247 chr3R 21907534 21907536 5 13568288 8.5 11.5 10.0 0.5 13568289 chr3R 8339247 intergenic not near genes chr3R 15123392 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_5_15120001 chr3R_15120001 RAL-391_75b 523 chr3R 8363209 8363227 chr3R 8363286 8363304 5 76 1.5 1.5 1.5 2.0 95 chr3R 8363209 exon CG7963 + chr3R 8363256 exon CG7963 + chr3R 8363304 exon CG7963 + chr3R_5_8360001 chr3R_8360001 RAL-391_75b 524 chr3R 8403013 8403041 chr3R 8412179 8412207 roo 5 9166 1.0 1.0 1.0 2.5 9194 chr3R 8403013 intron CG45263 - chr3R 8407610 intron CG45263 - chr3R 8412207 intron CG45263 - chr3R_5_8405001 chr3R_8405001 RAL-391_75b 525 chr3R 8439508 8439534 chr3R 8439584 8439608 8 75 1.0 0.5 0.8 4.4 100 chr3R 8439508 intron CG45263 - chr3R 8439558 intron CG45263 - chr3R 8439608 intron CG45263 - chr3R_8_8435001 chr3R_8435001 RAL-391_75b 526 chr3R 8537823 8537856 chr3R 8537906 8537938 8 83 1.5 1.0 1.2 3.6 115 chr3R 8537823 intergenic not near genes chr3R 8537880 intergenic not near genes chr3R 8537938 intergenic not near genes chr3R_8_8535001 chr3R_8535001 RAL-391_75b 527 chr3R 8631509 8631546 chr3R 8631613 8631650 13 104 1.5 3.0 2.2 4.1 141 chr3R 8631509 intergenic not near genes chr3R 8631580 intergenic not near genes chr3R 8631650 intergenic not near genes chr3R_13_8630001 chr3R_8630001 RAL-391_75b 528 chr3R 8740250 8740263 chr3R 8740339 8740352 4 87 0.5 2.0 1.2 1.8 102 chr3R 8740250 intron CG9801 - chr3R 8740301 intron CG9801 - chr3R 8740352 intron CG9801 - chr3R_4_8740001 chr3R_8740001 RAL-391_75b 529 chr3R 8745750 8745776 chr3R 8745861 8745886 4 111 1.5 1.0 1.2 1.8 136 chr3R 8745750 intron CG9801 - chr3R 8745818 intron CG9801 - chr3R 8745886 intron CG9801 - chr3R_4_8745001 chr3R_8745001 RAL-391_75b 530 chr3R 8882073 8882087 chr3R 8882164 8882178 5 91 0.5 1.5 1.0 2.5 105 chr3R 8882073 intron pyd - chr3R 8882126 intron pyd - chr3R 8882178 intron pyd - chr3R_5_8880001 chr3R_8880001 RAL-391_75b 531 chr3R 9108864 9108881 chr3R 9108940 9108956 4 76 1.5 1.0 1.2 1.8 92 chr3R 9108864 intron pum - chr3R 9108910 intron pum - chr3R 9108956 intron pum - chr3R_4_9105001 chr3R_9105001 RAL-391_75b 532 chr3R 9141167 9141191 chr3R 9141255 9141280 5 89 0.5 2.5 1.5 2.0 113 chr3R 9141167 intron pum - chr3R 9141224 intron pum - chr3R 9141280 intron pum - chr3R_5_9140001 chr3R_9140001 RAL-391_75b 533 chr3R 9204255 9204275 chr3R 9204342 9204362 4 87 0.5 1.5 1.0 2.0 107 chr3R 9204255 intron pum - chr3R 9204308 intron pum - chr3R 9204362 intron pum - chr3R_4_9200001 chr3R_9200001 RAL-391_75b 534 chr3R 9699990 9700001 chr3R 9700079 9700089 1360 4 89 1.5 0.5 1.0 2.0 99 chr3R 9699990 intron Unc-115a - chr3R 9700040 intron Unc-115a - chr3R 9700089 intron Unc-115a - chr3R_4_9700001 chr3R_9700001 RAL-391_75b 535 chr3R 9836869 9836892 chr3R 9836957 9836980 5 88 1.0 2.0 1.5 2.0 111 chr3R 9836869 intron Teh1 - chr3R 9836924 intron Teh1 - chr3R 9836980 intron Teh1 - chr3R_5_9835001 chr3R_9835001 RAL-391_75b 536 chr3R 9879182 9879198 chr3R 9879258 9879274 5 76 1.0 1.5 1.2 2.3 92 chr3R 9879182 intron Glut4EF + chr3R 9879228 intron Glut4EF + chr3R 9879274 intron Glut4EF + chr3R_5_9875001 chr3R_9875001 RAL-391_75b 537 chr3R 10080223 10080249 chr3R 10080332 10080357 6 109 2.0 1.0 1.5 2.4 134 chr3R 10080223 intergenic not near genes chr3R 10080290 intergenic not near genes chr3R 10080357 intergenic not near genes chr3R_6_10080001 chr3R_10080001 RAL-391_75b 538 chr3R 10394073 10394092 chr3R 10394172 10394191 5 99 1.5 1.5 1.5 2.0 118 chr3R 10394073 intron cwo + chr3R 10394132 intron cwo + chr3R 10394191 intron cwo + chr3R_5_10390001 chr3R_10390001 RAL-391_75b 539 chr3R 10594590 10594612 chr3R 10594675 10594697 4 85 2.0 1.5 1.8 1.4 107 chr3R 10594590 intron hth - chr3R 10594644 intron hth - chr3R 10594697 intron hth - chr3R_4_10590001 chr3R_10590001 RAL-391_75b 540 chr3R 11085464 11085472 chr3R 11085541 11085549 4 77 0.0 2.5 1.2 1.8 85 chr3R 11085464 3` UTR CR44940 - chr3R 11085506 intergenic CR44940 - chr3R 11085549 intergenic CR44940 - chr3R_4_11085001 chr3R_11085001 RAL-391_75b 541 chr3R 11102332 11102350 chr3R 11102413 11102428 5 80 0.5 1.0 0.8 2.8 96 chr3R 11102332 intergenic not near genes chr3R 11102380 intergenic not near genes chr3R 11102428 intergenic not near genes chr3R_5_11100001 chr3R_11100001 RAL-391_75b 542 chr3R 11130116 11130135 chr3R 11130205 11130224 4 89 1.5 0.0 0.8 2.2 108 chr3R 11130116 intergenic not near genes chr3R 11130170 intergenic not near genes chr3R 11130224 intergenic not near genes chr3R_4_11130001 chr3R_11130001 RAL-391_75b 543 chr3R 11151671 11151698 chr3R 11156564 11156591 4 4893 17.0 1.0 9.0 0.4 4920 chr3R 11151671 3` UTR Ugt86Di - chr3R 11154131 intergenic Ugt86Di -,Ugt86Dc + chr3R 11156591 intergenic Ugt86Dc + chr3R_4_11150001 chr3R_11150001 RAL-391_75b 544 chr3R 11303090 11303106 chr3R 11303170 11303186 7 80 3.5 1.0 2.2 2.2 96 chr3R 11303090 intron CR31386 - chr3R 11303138 intron CR31386 - chr3R 11303186 intron CR31386 - chr3R_7_11300001 chr3R_11300001 RAL-391_75b 545 chr3R 11379234 11379267 chr3R 11388389 11388422 roo 8 9155 1.0 1.0 1.0 4.0 9188 chr3R 11379234 intron pros + chr3R 11383828 intron pros + chr3R 11388422 intron pros + chr3R_8_11380001 chr3R_11380001 RAL-391_75b 546 chr3R 11406306 11406320 chr3R 11406383 11406397 4 77 0.0 1.5 0.8 2.2 91 chr3R 11406306 3` UTR pros + chr3R 11406352 3` UTR pros + chr3R 11406397 3` UTR pros + chr3R_4_11405001 chr3R_11405001 RAL-391_75b 547 chr3R 11476950 11476964 chr3R 11477052 11477066 4 102 1.5 0.0 0.8 2.2 116 chr3R 11476950 intergenic not near genes chr3R 11477008 intergenic not near genes chr3R 11477066 intergenic not near genes chr3R_4_11475001 chr3R_11475001 RAL-391_75b 548 chr3R 11513847 11513864 chr3R 11513930 11513947 8 82 1.0 2.5 1.8 2.9 100 chr3R 11513847 intergenic not near genes chr3R 11513897 intergenic not near genes chr3R 11513947 intergenic not near genes chr3R_8_11510001 chr3R_11510001 RAL-391_75b 549 chr3R 11734165 11734180 chr3R 11734282 11734299 4 118 0.5 0.5 0.5 2.7 134 chr3R 11734165 intergenic not near genes chr3R 11734232 intergenic not near genes chr3R 11734299 intergenic not near genes chr3R_4_11730001 chr3R_11730001 RAL-391_75b 550 chr3R 11834172 11834197 chr3R 11834255 11834280 7 83 0.5 1.5 1.0 3.5 108 chr3R 11834172 intron CG6959 - chr3R 11834226 intron CG6959 - chr3R 11834280 intron CG6959 - chr3R_7_11830001 chr3R_11830001 RAL-391_75b 551 chr3R 11841059 11841098 chr3R 11846250 11846288 BS 9 5191 2.5 1.0 1.8 3.2 5229 chr3R 11841059 intron CG6959 - chr3R 11843674 intron CG6959 - chr3R 11846288 intron CG6959 - chr3R_9_11840001 chr3R_11840001 RAL-391_75b 552 chr3R 11853773 11853793 chr3R 11853878 11853898 5 105 3.0 2.0 2.5 1.4 125 chr3R 11853773 intron CG6959 - chr3R 11853836 intron CG6959 - chr3R 11853898 intron CG6959 - chr3R_5_11850001 chr3R_11850001 RAL-391_75b 553 chr3R 12176685 12176709 chr3R 12176779 12176803 5 94 0.5 1.0 0.8 2.8 118 chr3R 12176685 intergenic not near genes chr3R 12176744 intergenic not near genes chr3R 12176803 intergenic not near genes chr3R_5_12175001 chr3R_12175001 RAL-391_75b 554 chr3R 12214344 12214370 chr3R 12214435 12214461 8 90 1.0 0.5 0.8 4.4 117 chr3R 12214344 3` UTR CG4848 - chr3R 12214402 3` UTR CG4848 - chr3R 12214461 3` UTR CG4848 - chr3R_8_12210001 chr3R_12210001 RAL-391_75b 555 chr3R 12733474 12733508 chr3R 12733551 12733583 6 77 1.0 0.5 0.8 3.3 109 chr3R 12733474 intergenic not near genes chr3R 12733528 intergenic not near genes chr3R 12733583 intergenic not near genes chr3R_6_12730001 chr3R_12730001 RAL-391_75b 556 chr3R 12952281 12952311 chr3R 12952406 12952436 11 125 1.5 0.5 1.0 5.5 155 chr3R 12952281 intron grsm - chr3R 12952358 intron grsm - chr3R 12952436 intron grsm - chr3R_11_12950001 chr3R_12950001 RAL-391_75b 557 chr3R 13252265 13252283 chr3R 13252341 13252359 7 76 0.5 2.0 1.2 3.2 94 chr3R 13252265 intron Ace - chr3R 13252312 intron Ace - chr3R 13252359 intron Ace - chr3R_7_13250001 chr3R_13250001 RAL-391_75b 558 chr3R 13603054 13603341 chr3R 13603145 13603433 5 91 0.5 0.5 0.5 3.3 379 chr3R 13603054 intergenic not near genes chr3R 13603244 intergenic not near genes chr3R 13603433 intergenic not near genes chr3R_5_13600001 chr3R_13600001 RAL-391_75b 559 chr3R 13617679 13617712 chr3R 13617786 13617819 5 107 1.0 0.0 0.5 3.3 140 chr3R 13617679 intergenic CR45680 - chr3R 13617749 3` UTR CR45680 - chr3R 13617819 3` UTR CR45680 - chr3R_5_13615001 chr3R_13615001 RAL-391_75b 560 chr3R 13863679 13863713 chr3R 13863767 13863799 4 87 1.0 2.5 1.8 1.4 120 chr3R 13863679 intergenic not near genes chr3R 13863739 intergenic not near genes chr3R 13863799 intergenic not near genes chr3R_4_13860001 chr3R_13860001 RAL-391_75b 561 chr3R 14119688 14119713 chr3R 14119766 14119791 8 78 1.5 2.5 2.0 2.7 103 chr3R 14119688 3` UTR Abi - chr3R 14119740 3` UTR Abi - chr3R 14119791 3` UTR Abi - chr3R_8_14115001 chr3R_14115001 RAL-391_75b 562 chr3R 14166683 14166695 chr3R 14167328 14167340 4 645 2.0 0.5 1.2 1.8 657 chr3R 14166683 3` UTR Dop1R1 - chr3R 14167012 3` UTR Dop1R1 - chr3R 14167340 3` UTR Dop1R1 - chr3R_4_14165001 chr3R_14165001 RAL-391_75b 563 chr3R 14319066 14319089 chr3R 14319148 14319171 5 82 0.0 1.5 0.8 2.8 105 chr3R 14319066 3` UTR pr-set7 + chr3R 14319118 3` UTR pr-set7 + chr3R 14319171 3` UTR pr-set7 + chr3R_5_14315001 chr3R_14315001 RAL-391_75b 564 chr3R 14547655 14547661 chr3R 14547906 14547911 4 251 0.5 1.0 0.8 2.2 256 chr3R 14547655 intron Pde6 - chr3R 14547783 intron Pde6 - chr3R 14547911 intron Pde6 - chr3R_4_14545001 chr3R_14545001 RAL-391_75b 565 chr3R 14549811 14549831 chr3R 14549887 14549907 5 76 2.0 1.5 1.8 1.8 96 chr3R 14549811 intron Pde6 - chr3R 14549859 intron Pde6 - chr3R 14549907 intron Pde6 - chr3R_5_14545001 chr3R_14545001 RAL-391_75b 566 chr3R 14869871 14869883 chr3R 14869962 14869974 4 91 1.0 1.0 1.0 2.0 103 chr3R 14869871 intron btsz - chr3R 14869922 intron btsz - chr3R 14869974 intron btsz - chr3R_4_14865001 chr3R_14865001 RAL-391_75b 567 chr3R 15167813 15167836 chr3R 15167969 15167993 8 157 1.5 2.5 2.0 2.7 180 chr3R 15167813 intron Gyc88E + chr3R 15167903 intron Gyc88E + chr3R 15167993 intron Gyc88E + chr3R_8_15165001 chr3R_15165001 RAL-391_75b 568 chr3R 15585945 15585955 chr3R 15586042 15586052 4 97 4.0 2.5 3.2 1.0 107 chr3R 15585945 intergenic not near genes chr3R 15585998 intergenic not near genes chr3R 15586052 intergenic not near genes chr3R_4_15585001 chr3R_15585001 RAL-391_75b 569 chr3R 15601167 15601188 chr3R 15608689 15608710 412 7 7522 2.5 2.0 2.2 2.2 7543 chr3R 15601167 intergenic not near genes chr3R 15604938 intergenic not near genes chr3R 15608710 intergenic not near genes chr3R_7_15600001 chr3R_15600001 RAL-391_75b 570 chr3R 15627007 15627039 chr3R 15627087 15627119 4 80 1.0 2.0 1.5 1.6 112 chr3R 15627007 intergenic not near genes chr3R 15627063 intergenic not near genes chr3R 15627119 intergenic not near genes chr3R_4_15625001 chr3R_15625001 RAL-391_75b 571 chr3R 15790134 15790285 chr3R 15790242 15790403 14 113 3.5 2.5 3.0 3.5 269 chr3R 15790134 exon c(3)G - chr3R 15790268 exon c(3)G - chr3R 15790403 exon c(3)G - chr3R_14_15790001 chr3R_15790001 RAL-391_75b 572 chr3R 15790389 15790398 chr3R 15790595 15790604 5 206 4.5 9.0 6.8 0.6 215 chr3R 15790389 exon c(3)G - chr3R 15790496 exon c(3)G - chr3R 15790604 exon c(3)G - chr3R_5_15790001 chr3R_15790001 RAL-391_75b 573 chr3R 15790839 15790873 chr3R 15790955 15790989 9 116 5.0 7.5 6.2 1.2 150 chr3R 15790839 exon c(3)G - chr3R 15790914 intron c(3)G - chr3R 15790989 exon c(3)G - chr3R_9_15790001 chr3R_15790001 RAL-391_75b 574 chr3R 16756323 16756353 chr3R 16762514 16762544 diver 4 6190 1.0 1.5 1.2 1.8 6221 chr3R 16756323 intron bxd - chr3R 16759434 intron bxd - chr3R 16762544 intron bxd - chr3R_4_16755001 chr3R_16755001 RAL-391_75b 575 chr3R 17120518 17120531 chr3R 17120742 17120756 5 225 1.5 2.0 1.8 1.8 238 chr3R 17120518 intron,exon cher -,CG34278 + chr3R 17120637 intron,exon cher -,CG34278 + chr3R 17120756 intron,3` UTR cher -,CG34278 + chr3R_5_17120001 chr3R_17120001 RAL-391_75b 576 chr3R 17591287 17591318 chr3R 17591723 17591754 F-element 6 436 1.0 0.0 0.5 4.0 467 chr3R 17591287 intergenic not near genes chr3R 17591520 intergenic not near genes chr3R 17591754 intergenic not near genes chr3R_6_17590001 chr3R_17590001 RAL-391_75b 577 chr3R 17845204 17845216 chr3R 17845281 17845291 5 77 0.0 4.5 2.2 1.6 87 chr3R 17845204 intron tinc + chr3R 17845248 intron tinc + chr3R 17845291 intron tinc + chr3R_5_17845001 chr3R_17845001 RAL-391_75b 578 chr3R 17925860 17925887 chr3R 17927325 17927354 hobo 6 1466 1.5 5.0 3.2 1.4 1494 chr3R 17925860 intron cpo + chr3R 17926607 intron cpo + chr3R 17927354 intron cpo + chr3R_6_17925001 chr3R_17925001 RAL-391_75b 579 chr3R 18058388 18058409 chr3R 18058495 18058516 5 106 1.5 0.0 0.8 2.8 128 chr3R 18058388 intergenic not near genes chr3R 18058452 intergenic not near genes chr3R 18058516 intergenic not near genes chr3R_5_18055001 chr3R_18055001 RAL-391_75b 580 chr3R 18215765 18215771 chr3R 18215934 18215940 4 169 0.0 3.0 1.5 1.6 175 chr3R 18215765 intergenic CG14314 + chr3R 18215852 intergenic CG14314 + chr3R 18215940 intergenic CG14314 + chr3R_4_18215001 chr3R_18215001 RAL-391_75b 581 chr3R 18501595 18501622 chr3R 18501676 18501703 4 81 1.0 2.0 1.5 1.6 108 chr3R 18501595 intron fru - chr3R 18501649 intron fru - chr3R 18501703 intron fru - chr3R_4_18500001 chr3R_18500001 RAL-391_75b 582 chr3R 18670380 18670398 chr3R 18670473 18670491 4 93 1.0 1.0 1.0 2.0 111 chr3R 18670380 intron CG7702 + chr3R 18670436 intron CG7702 + chr3R 18670491 intron CG7702 + chr3R_4_18670001 chr3R_18670001 RAL-391_75b 583 chr3R 18720306 18720336 chr3R 18720402 18720432 6 96 0.0 0.0 0.0 6.0 126 chr3R 18720306 intron Cha + chr3R 18720369 intron Cha + chr3R 18720432 intron Cha + chr3R_6_18720001 chr3R_18720001 RAL-391_75b 584 chr3R 18781692 18781724 chr3R 18781768 18781800 6 76 1.0 1.0 1.0 3.0 108 chr3R 18781692 intron CG7720 - chr3R 18781746 intron CG7720 - chr3R 18781800 intron CG7720 - chr3R_6_18780001 chr3R_18780001 RAL-391_75b 585 chr3R 18808497 18808503 chr3R 18808573 18808580 4 77 0.5 1.5 1.0 2.0 83 chr3R 18808497 intron CG18208 - chr3R 18808538 intron CG18208 - chr3R 18808580 intron CG18208 - chr3R_4_18805001 chr3R_18805001 RAL-391_75b 586 chr3R 18812090 18812102 chr3R 18812168 18812180 5 78 1.5 2.0 1.8 1.8 90 chr3R 18812090 intron CG18208 - chr3R 18812135 intron CG18208 - chr3R 18812180 intron CG18208 - chr3R_5_18810001 chr3R_18810001 RAL-391_75b 587 chr3R 18863161 18863181 chr3R 18863247 18863267 4 86 0.0 0.5 0.2 3.3 106 chr3R 18863161 intergenic not near genes chr3R 18863214 intergenic not near genes chr3R 18863267 intergenic not near genes chr3R_4_18860001 chr3R_18860001 RAL-391_75b 588 chr3R 19109224 19109250 chr3R 19109336 19109362 4 112 1.0 2.0 1.5 1.6 138 chr3R 19109224 intron CG6040 + chr3R 19109293 intron CG6040 + chr3R 19109362 intron CG6040 + chr3R_4_19105001 chr3R_19105001 RAL-391_75b 589 chr3R 19140271 19140295 chr3R 19140719 19140743 5 448 1.0 1.5 1.2 2.3 472 chr3R 19140271 3` UTR Ppcs - chr3R 19140507 3` UTR Ppcs - chr3R 19140743 3` UTR Ppcs - chr3R_5_19140001 chr3R_19140001 RAL-391_75b 590 chr3R 19475615 19475652 chr3R 19475739 19475776 10 124 1.5 1.5 1.5 4.0 161 chr3R 19475615 intron Dys + chr3R 19475696 intron Dys + chr3R 19475776 intron Dys + chr3R_10_19475001 chr3R_19475001 RAL-391_75b 591 chr3R 19683517 19683543 chr3R 19683662 19683688 11 144 1.5 2.5 2.0 3.7 171 chr3R 19683517 intron Naam + chr3R 19683602 intron Naam + chr3R 19683688 intron Naam + chr3R_11_19680001 chr3R_19680001 RAL-391_75b 592 chr3R 19953950 19953971 chr3R 19954027 19954048 5 77 1.5 2.0 1.8 1.8 98 chr3R 19953950 intron Hs6st - chr3R 19953999 intron Hs6st - chr3R 19954048 intron Hs6st - chr3R_5_19950001 chr3R_19950001 RAL-391_75b 593 chr3R 19957270 19957300 chr3R 19957345 19957376 6 76 1.0 0.5 0.8 3.3 106 chr3R 19957270 intron Hs6st - chr3R 19957323 intron Hs6st - chr3R 19957376 intron Hs6st - chr3R_6_19955001 chr3R_19955001 RAL-391_75b 594 chr3R 20109546 20109567 chr3R 20114752 20114773 copia 5 5205 0.0 2.0 1.0 2.5 5227 chr3R 20109546 intergenic not near genes chr3R 20112160 intergenic not near genes chr3R 20114773 intergenic CG10887 + chr3R_5_20110001 chr3R_20110001 RAL-391_75b 595 chr3R 20351506 20351525 chr3R 20351635 20351654 5 129 0.5 1.5 1.0 2.5 148 chr3R 20351506 intergenic not near genes chr3R 20351580 intergenic not near genes chr3R 20351654 intergenic not near genes chr3R_5_20350001 chr3R_20350001 RAL-391_75b 596 chr3R 20602590 20602626 chr3R 20602675 20602710 4 85 0.5 0.5 0.5 2.7 120 chr3R 20602590 intron bon + chr3R 20602650 intron bon + chr3R 20602710 intron bon + chr3R_4_20600001 chr3R_20600001 RAL-391_75b 597 chr3R 20703484 20703511 chr3R 20703878 20703905 5 394 0.5 0.5 0.5 3.3 421 chr3R 20703484 intron Oamb - chr3R 20703694 intron Oamb - chr3R 20703905 intron Oamb - chr3R_5_20700001 chr3R_20700001 RAL-391_75b 598 chr3R 20722855 20722859 chr3R 20722981 20722985 4 126 2.0 1.5 1.8 1.4 130 chr3R 20722855 intergenic not near genes chr3R 20722920 intergenic not near genes chr3R 20722985 intergenic not near genes chr3R_4_20720001 chr3R_20720001 RAL-391_75b 599 chr3R 20787439 20787454 chr3R 20787530 20787545 4 91 1.5 2.5 2.0 1.3 106 chr3R 20787439 intron Syp + chr3R 20787492 intron Syp + chr3R 20787545 intron Syp + chr3R_4_20785001 chr3R_20785001 RAL-391_75b 600 chr3R 20870263 20870284 chr3R 20870348 20870369 5 85 1.5 3.0 2.2 1.6 106 chr3R 20870263 intergenic not near genes chr3R 20870316 intergenic not near genes chr3R 20870369 intergenic not near genes chr3R_5_20870001 chr3R_20870001 RAL-391_75b 601 chr3R 21239807 21239944 chr3R 21239901 21240020 4 90 0.0 0.0 0.0 4.0 213 chr3R 21239807 intergenic not near genes chr3R 21239914 intergenic not near genes chr3R 21240020 intergenic not near genes chr3R_4_21235001 chr3R_21235001 RAL-391_75b 602 chr3R 21472019 21472033 chr3R 21472100 21472114 4 81 1.0 2.0 1.5 1.6 95 chr3R 21472019 intergenic not near genes chr3R 21472066 intergenic not near genes chr3R 21472114 intergenic not near genes chr3R_4_21470001 chr3R_21470001 RAL-391_75b 603 chr3R 21614338 21614364 chr3R 21614418 21614442 6 80 0.0 0.0 0.0 6.0 104 chr3R 21614338 intron InR - chr3R 21614390 intron InR - chr3R 21614442 intron InR - chr3R_6_21610001 chr3R_21610001 RAL-391_75b 604 chr3R 21761118 21761155 chr3R 21768510 21768547 mdg1 8 7391 1.5 2.0 1.8 2.9 7429 chr3R 21761118 exon CG42335 + chr3R 21764832 intron CG42335 + chr3R 21768547 exon CG42335 + chr3R_8_21760001 chr3R_21760001 RAL-391_75b 605 chr3R 8339246 8339247 chr3R 21907534 21907534 5 13568288 8.5 11.5 10.0 0.5 13568288 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907534 intergenic CG6678 + chr3R_5_15120001 chr3R_15120001 RAL-391_75b 606 chr3R 21337429 21337429 chr3R 21907534 21907534 6 570105 6.0 11.5 8.8 0.6 570105 chr3R 21337429 intron CG16791 - chr3R 21622482 intron E2f - chr3R 21907534 intergenic CG6678 + chr3R_6_21620001 chr3R_21620001 RAL-391_75b 607 chr3R 21907534 21907534 chr3R 28831801 28831802 12 6924268 14.0 10.5 12.2 0.9 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_12_25365001 chr3R_25365001 RAL-391_75b 608 chr3R 19457915 19457915 chr3R 21907535 21907535 5 2449620 2.0 11.5 6.8 0.6 2449620 chr3R 19457915 3` UTR CG31221 + chr3R 20682725 intergenic not near genes chr3R 21907535 intergenic CG6678 + chr3R_5_20680001 chr3R_20680001 RAL-391_75b 609 chr3R 20177845 20177845 chr3R 21907535 21907535 4 1729690 3.5 11.5 7.5 0.5 1729690 chr3R 20177845 intergenic not near genes chr3R 21042690 intergenic Dhc93AB - chr3R 21907535 intergenic CG6678 + chr3R_4_21040001 chr3R_21040001 RAL-391_75b 610 chr3R 21907535 21907535 chr3R 28831801 28831803 33 6924266 14.0 10.5 12.2 2.5 6924268 chr3R 21907535 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831803 intron WASp - chr3R_33_25365001 chr3R_25365001 RAL-391_75b 611 chr3R 9620954 9620957 chr3R 21907536 21907536 4 12286580 3.0 11.5 7.2 0.5 12286582 chr3R 9620954 intron CG8312 + chr3R 15764245 intergenic not near genes chr3R 21907536 intergenic CG6678 + chr3R_4_15760001 chr3R_15760001 RAL-391_75b 612 chr3R 21907536 21907536 chr3R 28831801 28831802 33 6924266 14.0 10.5 12.2 2.5 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_33_25365001 chr3R_25365001 RAL-391_75b 613 chr3R 21907536 21907536 chr3R 29013339 29013340 4 7105804 14.0 2.0 8.0 0.4 7105804 chr3R 21907536 intergenic CG6678 + chr3R 25460438 intron Fur1 - chr3R 29013340 intron wat - chr3R_4_25460001 chr3R_25460001 RAL-391_75b 614 chr3R 22369575 22369604 chr3R 22369656 22369685 5 81 1.0 1.5 1.2 2.3 110 chr3R 22369575 intron PyK + chr3R 22369630 intron PyK + chr3R 22369685 intron PyK + chr3R_5_22365001 chr3R_22365001 RAL-391_75b 615 chr3R 22437805 22437823 chr3R 22437895 22437913 5 90 0.0 1.0 0.5 3.3 108 chr3R 22437805 intergenic not near genes chr3R 22437859 intergenic not near genes chr3R 22437913 intergenic not near genes chr3R_5_22435001 chr3R_22435001 RAL-391_75b 616 chr3R 22450545 22450577 chr3R 22453185 22453217 NOF 5 2640 1.0 2.0 1.5 2.0 2672 chr3R 22450545 intron CG34376 + chr3R 22451881 intron CG34376 + chr3R 22453217 intron CG34376 + chr3R_5_22450001 chr3R_22450001 RAL-391_75b 617 chr3R 22684204 22684237 chr3R 22684280 22684313 7 76 2.0 0.5 1.2 3.2 109 chr3R 22684204 intergenic not near genes chr3R 22684258 intergenic not near genes chr3R 22684313 intergenic not near genes chr3R_7_22680001 chr3R_22680001 RAL-391_75b 618 chr3R 22769095 22769124 chr3R 22769172 22769200 8 77 0.5 1.5 1.0 4.0 105 chr3R 22769095 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769148 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769200 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_8_22765001 chr3R_22765001 RAL-391_75b 619 chr3R 22820402 22820428 chr3R 22820485 22820510 4 82 1.0 0.5 0.8 2.2 108 chr3R 22820402 intergenic not near genes chr3R 22820456 intergenic not near genes chr3R 22820510 intergenic not near genes chr3R_4_22820001 chr3R_22820001 RAL-391_75b 620 chr3R 22842388 22842417 chr3R 22842487 22842516 6 99 1.0 1.0 1.0 3.0 128 chr3R 22842388 intergenic not near genes chr3R 22842452 intergenic not near genes chr3R 22842516 intergenic not near genes chr3R_6_22840001 chr3R_22840001 RAL-391_75b 621 chr3R 22971242 22971273 chr3R 22971336 22971367 6 94 1.0 1.5 1.2 2.7 125 chr3R 22971242 intergenic not near genes chr3R 22971304 intergenic not near genes chr3R 22971367 intergenic not near genes chr3R_6_22970001 chr3R_22970001 RAL-391_75b 622 chr3R 23002966 23002977 chr3R 23003043 23003055 4 78 4.0 1.0 2.5 1.1 89 chr3R 23002966 exon CG34375 - chr3R 23003010 exon CG34375 - chr3R 23003055 intron CG34375 - chr3R_4_23000001 chr3R_23000001 RAL-391_75b 623 chr3R 23073656 23073682 chr3R 23073745 23073769 8 89 1.0 1.5 1.2 3.6 113 chr3R 23073656 intron CG13830 - chr3R 23073712 intron CG13830 - chr3R 23073769 intron CG13830 - chr3R_8_23070001 chr3R_23070001 RAL-391_75b 624 chr3R 23684697 23684721 chr3R 23685183 23685207 roo 4 486 4.0 3.5 3.8 0.8 510 chr3R 23684697 exon CG18754 + chr3R 23684952 intron CG18754 + chr3R 23685207 exon CG18754 + chr3R_4_23680001 chr3R_23680001 RAL-391_75b 625 chr3R 23739918 23739934 chr3R 23739992 23740011 6 76 1.5 1.0 1.2 2.7 93 chr3R 23739918 intron Hmgcr + chr3R 23739964 intron Hmgcr + chr3R 23740011 intron Hmgcr + chr3R_6_23735001 chr3R_23735001 RAL-391_75b 626 chr3R 23949044 23949062 chr3R 23949121 23949139 4 77 2.0 2.5 2.2 1.2 95 chr3R 23949044 intergenic not near genes chr3R 23949092 intergenic not near genes chr3R 23949139 intergenic not near genes chr3R_4_23945001 chr3R_23945001 RAL-391_75b 627 chr3R 24072083 24072100 chr3R 24072521 24072538 jockey 6 438 4.0 0.0 2.0 2.0 455 chr3R 24072083 intron 4EHP - chr3R 24072310 intron 4EHP - chr3R 24072538 intron 4EHP - chr3R_6_24070001 chr3R_24070001 RAL-391_75b 628 chr3R 24076923 24076948 chr3R 24078390 24078415 hobo 5 1467 1.0 4.0 2.5 1.4 1492 chr3R 24076923 intron 4EHP - chr3R 24077669 intron 4EHP - chr3R 24078415 intron 4EHP - chr3R_5_24075001 chr3R_24075001 RAL-391_75b 629 chr3R 24493064 24493087 chr3R 24493150 24493173 5 86 1.5 2.0 1.8 1.8 109 chr3R 24493064 intergenic not near genes chr3R 24493118 intergenic not near genes chr3R 24493173 intergenic not near genes chr3R_5_24490001 chr3R_24490001 RAL-391_75b 630 chr3R 24671218 24671233 chr3R 24671295 24671306 7 76 1.0 0.0 0.5 4.7 88 chr3R 24671218 intron slo + chr3R 24671262 intron slo + chr3R 24671306 intron slo + chr3R_7_24670001 chr3R_24670001 RAL-391_75b 631 chr3R 24739908 24739925 chr3R 24740020 24740037 6 112 4.0 1.0 2.5 1.7 129 chr3R 24739908 intron tok + chr3R 24739972 intron tok + chr3R 24740037 intron tok + chr3R_6_24735001 chr3R_24735001 RAL-391_75b 632 chr3R 24865767 24865792 chr3R 24866167 24866192 4 400 2.0 3.5 2.8 1.1 425 chr3R 24865767 exon Ela + chr3R 24865980 intron Ela + chr3R 24866192 exon Ela + chr3R_4_24865001 chr3R_24865001 RAL-391_75b 633 chr3R 25072758 25072783 chr3R 25072850 25072875 4 92 0.0 0.0 0.0 4.0 117 chr3R 25072758 3` UTR CG9996 - chr3R 25072816 3` UTR CG9996 - chr3R 25072875 3` UTR CG9996 - chr3R_4_25070001 chr3R_25070001 RAL-391_75b 634 chr3R 25362031 25362053 chr3R 25362109 25362131 4 77 1.0 1.0 1.0 2.0 100 chr3R 25362031 intron Fur1 - chr3R 25362081 intron Fur1 - chr3R 25362131 intron Fur1 - chr3R_4_25360001 chr3R_25360001 RAL-391_75b 635 chr3R 25765876 25765910 chr3R 25765955 25765989 6 79 2.5 2.5 2.5 1.7 113 chr3R 25765876 intergenic not near genes chr3R 25765932 intergenic not near genes chr3R 25765989 intergenic not near genes chr3R_6_25765001 chr3R_25765001 RAL-391_75b 636 chr3R 25832693 25832705 chr3R 25841875 25841887 roo 6 9182 2.0 1.5 1.8 2.1 9194 chr3R 25832693 exon alpha4GT2 + chr3R 25837290 intron alpha4GT2 + chr3R 25841887 exon alpha4GT2 + chr3R_6_25835001 chr3R_25835001 RAL-391_75b 637 chr3R 25908675 25908704 chr3R 25908757 25908786 4 82 1.5 1.5 1.5 1.6 111 chr3R 25908675 intron CG42235 + chr3R 25908730 intron CG42235 + chr3R 25908786 intron CG42235 + chr3R_4_25905001 chr3R_25905001 RAL-391_75b 638 chr3R 26235489 26235510 chr3R 26235571 26235592 4 82 1.0 2.5 1.8 1.4 103 chr3R 26235489 5` UTR CR42745 + chr3R 26235540 5` UTR CR42745 + chr3R 26235592 5` UTR CR42745 + chr3R_4_26235001 chr3R_26235001 RAL-391_75b 639 chr3R 26376327 26376355 chr3R 26385487 26385515 roo 4 9160 0.5 0.0 0.2 3.3 9188 chr3R 26376327 intergenic not near genes chr3R 26380921 intergenic not near genes chr3R 26385515 intergenic not near genes chr3R_4_26380001 chr3R_26380001 RAL-391_75b 640 chr3R 26420404 26420430 chr3R 26420630 26420656 5 225 2.0 1.0 1.5 2.0 252 chr3R 26420404 intergenic not near genes chr3R 26420530 intergenic not near genes chr3R 26420656 intergenic not near genes chr3R_5_26420001 chr3R_26420001 RAL-391_75b 641 chr3R 26558327 26558358 chr3R 26565639 26565669 Stalker4 4 7312 0.0 0.5 0.2 3.3 7342 chr3R 26558327 intron scrib + chr3R 26561998 intron scrib + chr3R 26565669 intron scrib + chr3R_4_26560001 chr3R_26560001 RAL-391_75b 642 chr3R 26844716 26844746 chr3R 26844795 26844825 5 79 1.0 1.0 1.0 2.5 109 chr3R 26844716 intron Lerp - chr3R 26844770 intron Lerp - chr3R 26844825 intron Lerp - chr3R_5_26840001 chr3R_26840001 RAL-391_75b 643 chr3R 26845570 26845605 chr3R 26845650 26845685 6 80 2.0 1.5 1.8 2.1 115 chr3R 26845570 intron Lerp - chr3R 26845628 intron Lerp - chr3R 26845685 intron Lerp - chr3R_6_26845001 chr3R_26845001 RAL-391_75b 644 chr3R 27030315 27030329 chr3R 27030604 27030618 5 289 2.0 1.5 1.8 1.8 303 chr3R 27030315 intron RYa-R + chr3R 27030466 intron RYa-R + chr3R 27030618 intron RYa-R + chr3R_5_27030001 chr3R_27030001 RAL-391_75b 645 chr3R 27107173 27107195 chr3R 27107397 27107417 7 224 1.0 2.0 1.5 2.8 244 chr3R 27107173 intergenic not near genes chr3R 27107295 intergenic not near genes chr3R 27107417 intergenic not near genes chr3R_7_27105001 chr3R_27105001 RAL-391_75b 646 chr3R 27140514 27140547 chr3R 27148124 27148157 412 5 7610 0.0 0.5 0.2 4.2 7643 chr3R 27140514 intron CG6051 - chr3R 27144336 intron CG6051 - chr3R 27148157 intron CG6051 - chr3R_5_27140001 chr3R_27140001 RAL-391_75b 647 chr3R 27218719 27218739 chr3R 27218805 27218825 4 86 0.5 2.5 1.5 1.6 106 chr3R 27218719 intergenic not near genes chr3R 27218772 intergenic not near genes chr3R 27218825 intergenic not near genes chr3R_4_27215001 chr3R_27215001 RAL-391_75b 648 chr3R 27275852 27275868 chr3R 27275936 27275952 7 84 4.5 1.0 2.8 1.8 100 chr3R 27275852 intron CG5938 + chr3R 27275902 intron CG5938 + chr3R 27275952 intron CG5938 + chr3R_7_27275001 chr3R_27275001 RAL-391_75b 649 chr3R 27342807 27342824 chr3R 27351388 27351405 Tirant 4 8581 0.5 1.0 0.8 2.2 8598 chr3R 27342807 intron CG42534 + chr3R 27347106 intron CG42534 + chr3R 27351405 intron CG42534 + chr3R_4_27345001 chr3R_27345001 RAL-391_75b 650 chr3R 27377387 27377499 chr3R 27377472 27377587 8 86 0.0 0.0 0.0 8.0 200 chr3R 27377387 3` UTR side - chr3R 27377487 3` UTR side - chr3R 27377587 3` UTR side - chr3R_8_27375001 chr3R_27375001 RAL-391_75b 651 chr3R 27521163 27521177 chr3R 27530372 27530386 roo 4 9209 0.5 2.0 1.2 1.8 9223 chr3R 27521163 intron CG12885 + chr3R 27525774 intron CG12885 + chr3R 27530386 intron CG12885 + chr3R_4_27525001 chr3R_27525001 RAL-391_75b 652 chr3R 27619708 27619731 chr3R 27619823 27619846 7 115 2.0 0.5 1.2 3.2 138 chr3R 27619708 intron Tusp + chr3R 27619777 intron Tusp + chr3R 27619846 intron Tusp + chr3R_7_27615001 chr3R_27615001 RAL-391_75b 653 chr3R 27648590 27648870 chr3R 27648673 27648944 7 80 1.0 0.0 0.5 4.7 354 chr3R 27648590 intron tau - chr3R 27648767 intron tau - chr3R 27648944 intron tau - chr3R_7_27645001 chr3R_27645001 RAL-391_75b 654 chr3R 27789078 27789105 chr3R 27789155 27789182 7 77 0.0 0.0 0.0 7.0 104 chr3R 27789078 exon CG34353 - chr3R 27789130 intron CG34353 - chr3R 27789182 intron CG34353 - chr3R_7_27785001 chr3R_27785001 RAL-391_75b 655 chr3R 27862955 27862981 chr3R 27868260 27868285 Transpac 6 5305 1.5 1.0 1.2 2.7 5330 chr3R 27862955 intron CG34353 - chr3R 27865620 intron CG34353 - chr3R 27868285 intron CG34353 - chr3R_6_27865001 chr3R_27865001 RAL-391_75b 656 chr3R 28173674 28173696 chr3R 28181104 28181126 mdg1 4 7430 3.0 2.5 2.8 1.1 7452 chr3R 28173674 intron CG34354 + chr3R 28177400 intron CG34354 + chr3R 28181126 intron CG34354 + chr3R_4_28175001 chr3R_28175001 RAL-391_75b 657 chr3R 28255958 28255973 chr3R 28256370 28256385 4 412 0.5 0.5 0.5 2.7 427 chr3R 28255958 intergenic not near genes chr3R 28256172 intergenic not near genes chr3R 28256385 intergenic not near genes chr3R_4_28255001 chr3R_28255001 RAL-391_75b 658 chr3R 28468930 28468957 chr3R 28469016 28469043 4 85 1.0 1.0 1.0 2.0 113 chr3R 28468930 intron beat-VI + chr3R 28468986 intron beat-VI + chr3R 28469043 intron beat-VI + chr3R_4_28465001 chr3R_28465001 RAL-391_75b 659 chr3R 28484353 28484375 chr3R 28486270 28486292 18 1917 12.0 27.0 19.5 0.9 1939 chr3R 28484353 intergenic CG1894 + chr3R 28485322 exon CG1894 + chr3R 28486292 intergenic CG1894 + chr3R_18_28485001 chr3R_28485001 RAL-391_75b 660 chr3R 21907534 21907534 chr3R 28831798 28831804 59 6924266 14.0 10.0 12.0 4.5 6924270 chr3R 21907534 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831804 intron WASp - chr3R_59_25365001 chr3R_25365001 RAL-391_75b 661 chr3R 29030601 29030618 chr3R 29030680 29030694 4 78 1.5 2.0 1.8 1.4 93 chr3R 29030601 3` UTR CG1951 + chr3R 29030648 3` UTR CG1951 + chr3R 29030694 3` UTR CG1951 + chr3R_4_29030001 chr3R_29030001 RAL-391_75b 662 chr3R 29211317 29211325 chr3R 29211394 29211402 4 77 0.0 6.0 3.0 1.0 85 chr3R 29211317 intergenic not near genes chr3R 29211360 intergenic not near genes chr3R 29211402 intergenic not near genes chr3R_4_29210001 chr3R_29210001 RAL-391_75b 663 chr3R 29406617 29406645 chr3R 29407903 29407931 jockey 5 1286 2.0 1.5 1.8 1.8 1314 chr3R 29406617 intron Ptp99A + chr3R 29407274 intron Ptp99A + chr3R 29407931 intron Ptp99A + chr3R_5_29405001 chr3R_29405001 RAL-391_75b 664 chr3R 29447820 29447849 chr3R 29447927 29447956 4 107 1.0 2.0 1.5 1.6 136 chr3R 29447820 intron Ptp99A + chr3R 29447888 intron Ptp99A + chr3R 29447956 intron Ptp99A + chr3R_4_29445001 chr3R_29445001 RAL-391_75b 665 chr3R 29472009 29472038 chr3R 29472102 29472131 6 93 0.0 1.5 0.8 3.3 122 chr3R 29472009 intron Ptp99A + chr3R 29472070 intron Ptp99A + chr3R 29472131 intron Ptp99A + chr3R_6_29470001 chr3R_29470001 RAL-391_75b 666 chr3R 29518303 29518326 chr3R 29518382 29518405 7 78 0.5 0.0 0.2 5.8 102 chr3R 29518303 intergenic not near genes chr3R 29518354 intergenic not near genes chr3R 29518405 intergenic not near genes chr3R_7_29515001 chr3R_29515001 RAL-391_75b 667 chr3R 29606088 29606111 chr3R 29606195 29606218 4 106 0.5 1.5 1.0 2.0 130 chr3R 29606088 intron alph + chr3R 29606153 intron alph + chr3R 29606218 intron alph + chr3R_4_29605001 chr3R_29605001 RAL-391_75b 668 chr3R 29627575 29627595 chr3R 29627659 29627686 5 90 1.0 3.5 2.2 1.6 111 chr3R 29627575 intergenic not near genes chr3R 29627630 intergenic not near genes chr3R 29627686 intergenic not near genes chr3R_5_29625001 chr3R_29625001 RAL-391_75b 669 chr3R 29738268 29738299 chr3R 29739735 29739766 hobo 6 1466 3.0 1.0 2.0 2.0 1498 chr3R 29738268 intergenic CG1969 +,CG7598 + chr3R 29739017 intron CG1969 + chr3R 29739766 5` UTR CG1969 + chr3R_6_29735001 chr3R_29735001 RAL-391_75b 670 chr3R 29758945 29758971 chr3R 29759023 29759049 6 78 3.5 2.5 3.0 1.5 104 chr3R 29758945 3` UTR CR44953 - chr3R 29758997 3` UTR CR44953 - chr3R 29759049 intergenic CR44953 - chr3R_6_29755001 chr3R_29755001 RAL-391_75b 671 chr3R 29773878 29773906 chr3R 29773969 29773996 8 91 0.0 0.5 0.2 6.7 118 chr3R 29773878 intron kay + chr3R 29773937 intron kay + chr3R 29773996 intron kay + chr3R_8_29770001 chr3R_29770001 RAL-391_75b 672 chr3R 29882018 29882048 chr3R 29891175 29891205 roo 6 9157 1.5 2.0 1.8 2.1 9187 chr3R 29882018 intron CG31038 + chr3R 29886612 intron CG31038 + chr3R 29891205 intron CG31038 + chr3R_6_29885001 chr3R_29885001 RAL-391_75b 673 chr3R 30084865 30084884 chr3R 30086332 30086351 hobo 4 1467 0.0 2.5 1.2 1.8 1486 chr3R 30084865 intron sima + chr3R 30085608 intron sima + chr3R 30086351 intron sima + chr3R_4_30085001 chr3R_30085001 RAL-391_75b 674 chr3R 30103702 30103728 chr3R 30103902 30103928 4 200 0.0 1.5 0.8 2.2 226 chr3R 30103702 intron sima + chr3R 30103815 intron sima + chr3R 30103928 intron sima + chr3R_4_30100001 chr3R_30100001 RAL-391_75b 675 chr3R 30136965 30136980 chr3R 30137044 30137059 5 79 2.0 0.5 1.2 2.3 94 chr3R 30136965 exon AdoR - chr3R 30137012 intron AdoR - chr3R 30137059 intron AdoR - chr3R_5_30135001 chr3R_30135001 RAL-391_75b 676 chr3R 30252277 30252337 chr3R 30252405 30252531 11 134 0.0 2.5 1.2 5.0 254 chr3R 30252277 exon CG9682 + chr3R 30252404 exon CG9682 + chr3R 30252531 exon CG9682 + chr3R_11_30250001 chr3R_30250001 RAL-391_75b 677 chr3R 30456396 30456423 chr3R 30456476 30456503 9 80 1.0 1.0 1.0 4.5 107 chr3R 30456396 intergenic CG2224 - chr3R 30456450 3` UTR CG2224 - chr3R 30456503 3` UTR CG2224 - chr3R_9_30455001 chr3R_30455001 RAL-391_75b 678 chr3R 30458019 30458041 chr3R 30458098 30458121 6 80 1.5 1.0 1.2 2.7 102 chr3R 30458019 intron CG2224 - chr3R 30458070 intron CG2224 - chr3R 30458121 intron CG2224 - chr3R_6_30455001 chr3R_30455001 RAL-391_75b 679 chr3R 30480474 30480510 chr3R 30482942 30482978 jockey 4 2468 0.0 0.5 0.2 3.3 2504 chr3R 30480474 intron PH4alphaEFB + chr3R 30481726 intron PH4alphaEFB + chr3R 30482978 intron PH4alphaEFB + chr3R_4_30480001 chr3R_30480001 RAL-391_75b 680 chr3R 30627606 30627634 chr3R 30627685 30627714 5 80 1.0 2.0 1.5 2.0 108 chr3R 30627606 exon CG2267 - chr3R 30627660 exon CG2267 - chr3R 30627714 exon CG2267 - chr3R_5_30625001 chr3R_30625001 RAL-391_75b 681 chr3R 30690170 30690190 chr3R 30690254 30690274 6 84 0.5 2.5 1.5 2.4 104 chr3R 30690170 intergenic Spn100A + chr3R 30690222 intergenic Spn100A + chr3R 30690274 intergenic Spn100A + chr3R_6_30690001 chr3R_30690001 RAL-391_75b 682 chr3R 30859406 30859424 chr3R 30859484 30859502 5 78 0.5 1.0 0.8 2.8 96 chr3R 30859406 intergenic not near genes chr3R 30859454 intergenic not near genes chr3R 30859502 intergenic not near genes chr3R_5_30855001 chr3R_30855001 RAL-391_75b 683 chr3R 30948075 30948089 chr3R 30948266 30948279 6 191 2.0 0.5 1.2 2.7 204 chr3R 30948075 intergenic not near genes chr3R 30948177 intergenic not near genes chr3R 30948279 intergenic not near genes chr3R_6_30945001 chr3R_30945001 RAL-391_75b 684 chr3R 31074230 31074243 chr3R 31081828 31081840 springer 4 7598 1.0 0.5 0.8 2.2 7610 chr3R 31074230 intron Sox100B + chr3R 31078035 intron Sox100B + chr3R 31081840 intron Sox100B + chr3R_4_31075001 chr3R_31075001 RAL-391_75b 685 chr3R 31610120 31610141 chr3R 31610205 31610227 5 86 0.0 0.0 0.0 5.0 107 chr3R 31610120 intron CycG - chr3R 31610174 intron CycG - chr3R 31610227 intron CycG - chr3R_5_31610001 chr3R_31610001 RAL-391_75b 686 chr3R 31691531 31691562 chr3R 31696297 31696328 Doc 5 4765 0.5 3.0 1.8 1.8 4797 chr3R 31691531 intergenic not near genes chr3R 31693930 intergenic not near genes chr3R 31696328 intergenic not near genes chr3R_5_31690001 chr3R_31690001 RAL-391_75b 687 chr3R 31699717 31699749 chr3R 31699799 31699830 7 81 1.5 1.0 1.2 3.2 113 chr3R 31699717 intergenic not near genes chr3R 31699774 intergenic not near genes chr3R 31699830 intergenic not near genes chr3R_7_31695001 chr3R_31695001 RAL-391_75b 688 chr3R 31930902 31930934 chr3R 31931000 31931033 5 99 2.0 1.0 1.5 2.0 131 chr3R 31930902 intron heph - chr3R 31930968 intron heph - chr3R 31931033 intron heph - chr3R_5_31930001 chr3R_31930001 RAL-391_75b 689 chr3R 31948440 31948466 chr3R 31948521 31948550 8 84 1.5 0.5 1.0 4.0 110 chr3R 31948440 intron heph - chr3R 31948495 intron heph - chr3R 31948550 intron heph - chr3R_8_31945001 chr3R_31945001 RAL-391_75b 690 chr3R 32043354 32043368 chr3R 32043533 32043547 6 179 5.5 10.0 7.8 0.7 193 chr3R 32043354 intergenic not near genes chr3R 32043450 intergenic not near genes chr3R 32043547 intergenic not near genes chr3R_6_32040001 chr3R_32040001 RAL-391_75b 691 chr4 671608 671629 chr4 680191 680212 Tirant 4 8583 0.5 0.5 0.5 2.7 8604 chr4 671608 intron CG11360 + chr4 675910 intron CG11360 + chr4 680212 intron CG11360 + chr4_4_675001 chr4_675001 RAL-391_75b 692 chrX 308988 309016 chrX 309073 309101 5 84 0.5 1.0 0.8 2.8 113 chrX 308988 intron CG3777 + chrX 309044 intron CG3777 + chrX 309101 intron CG3777 + chrX_5_305001 chrX_305001 RAL-391_75b 693 chrX 551421 551447 chrX 558983 559009 412 5 7561 2.0 1.5 1.8 1.8 7588 chrX 551421 intron Appl + chrX 555215 intron Appl + chrX 559009 intron Appl + chrX_5_555001 chrX_555001 RAL-391_75b 694 chrX 692256 692274 chrX 692333 692351 4 77 0.5 0.0 0.2 3.3 95 chrX 692256 intron sdk + chrX 692304 intron sdk + chrX 692351 intron sdk + chrX_4_690001 chrX_690001 RAL-391_75b 695 chrX 802295 802321 chrX 802371 802398 4 76 2.5 3.0 2.8 1.1 103 chrX 802295 exon CG13359 - chrX 802346 exon CG13359 - chrX 802398 exon CG13359 - chrX_4_800001 chrX_800001 RAL-391_75b 696 chrX 827611 827634 chrX 835402 835426 roo 6 7792 2.5 2.5 2.5 1.7 7815 chrX 827611 intron CG43867 - chrX 831518 intron CG43867 - chrX 835426 intron CG43867 - chrX_6_830001 chrX_830001 RAL-391_75b 697 chrX 906701 906732 chrX 908490 908520 S-element 4 1788 0.0 3.5 1.8 1.4 1819 chrX 906701 intron CG43867 - chrX 907610 intron CG43867 - chrX 908520 intron CG43867 - chrX_4_905001 chrX_905001 RAL-391_75b 698 chrX 1127285 1127304 chrX 1127592 1127611 8 307 0.5 1.0 0.8 4.4 326 chrX 1127285 intron CG3655 - chrX 1127448 intron CG3655 - chrX 1127611 intron CG3655 - chrX_8_1125001 chrX_1125001 RAL-391_75b 699 chrX 1153188 1153215 chrX 1153271 1153298 8 83 0.5 0.5 0.5 5.3 110 chrX 1153188 intergenic not near genes chrX 1153243 intergenic not near genes chrX 1153298 intergenic not near genes chrX_8_1150001 chrX_1150001 RAL-391_75b 700 chrX 1185577 1185592 chrX 1185656 1185671 4 79 0.5 1.0 0.8 2.2 94 chrX 1185577 intron CG14626 + chrX 1185624 intron CG14626 + chrX 1185671 intron CG14626 + chrX_4_1185001 chrX_1185001 RAL-391_75b 701 chrX 1518039 1518074 chrX 1523441 1523475 jockey 6 5402 0.0 3.5 1.8 2.1 5436 chrX 1518039 intergenic inc + chrX 1520757 intergenic not near genes chrX 1523475 intergenic not near genes chrX_6_1520001 chrX_1520001 RAL-391_75b 702 chrX 1954893 1954905 chrX 1962833 1962844 Stalker2 4 7940 3.0 2.0 2.5 1.1 7951 chrX 1954893 intron Hr4 + chrX 1958868 intron Hr4 + chrX 1962844 intron Hr4 + chrX_4_1955001 chrX_1955001 RAL-391_75b 703 chrX 2399844 2399862 chrX 2408197 2408215 roo 7 8352 1.0 0.0 0.5 4.7 8371 chrX 2399844 intergenic not near genes chrX 2404030 intergenic not near genes chrX 2408215 intergenic not near genes chrX_7_2400001 chrX_2400001 RAL-391_75b 704 chrX 2461508 2461535 chrX 2461671 2461696 7 163 0.0 1.0 0.5 4.7 188 chrX 2461508 intron boi - chrX 2461602 intron boi - chrX 2461696 intron boi - chrX_7_2460001 chrX_2460001 RAL-391_75b 705 chrX 2559363 2559383 chrX 2559450 2559471 7 87 3.0 2.5 2.8 1.8 108 chrX 2559363 intron Pdfr + chrX 2559417 intron Pdfr + chrX 2559471 intron Pdfr + chrX_7_2555001 chrX_2555001 RAL-391_75b 706 chrX 2578808 2578836 chrX 2578899 2578928 4 92 1.0 1.0 1.0 2.0 120 chrX 2578808 intergenic Pdfr +,Vha36-3 - chrX 2578868 intergenic Vha36-3 -,Pdfr + chrX 2578928 intergenic Vha36-3 -,Pdfr + chrX_4_2575001 chrX_2575001 RAL-391_75b 707 chrX 2803502 2803528 chrX 2803645 2803670 4 143 0.0 3.0 1.5 1.6 168 chrX 2803502 intron kirre + chrX 2803586 intron kirre + chrX 2803670 intron kirre + chrX_4_2800001 chrX_2800001 RAL-391_75b 708 chrX 3398142 3398156 chrX 3398223 3398237 4 81 1.0 2.0 1.5 1.6 95 chrX 3398142 intron,intron CR44999 +,CG12535 - chrX 3398190 intron,intron CR44999 +,CG12535 - chrX 3398237 intron,intron CR44999 +,CG12535 - chrX_4_3395001 chrX_3395001 RAL-391_75b 709 chrX 3597552 3597579 chrX 3619720 3619747 roo 8 22168 1.0 2.5 1.8 2.9 22195 chrX 3597552 intron AstA-R1 + chrX 3608650 intron AstA-R1 + chrX 3619747 intron AstA-R1 + chrX_8_3605001 chrX_3605001 RAL-391_75b 710 chrX 4262759 4262782 chrX 4262858 4262881 6 99 0.5 1.0 0.8 3.3 122 chrX 4262759 intergenic not near genes chrX 4262820 intergenic not near genes chrX 4262881 intergenic not near genes chrX_6_4260001 chrX_4260001 RAL-391_75b 711 chrX 4792393 4792406 chrX 4792825 4792839 jockey 4 432 1.0 1.5 1.2 1.8 446 chrX 4792393 intergenic not near genes chrX 4792616 intergenic not near genes chrX 4792839 intergenic not near genes chrX_4_4790001 chrX_4790001 RAL-391_75b 712 chrX 4893364 4893389 chrX 4893633 4893657 5 269 1.0 1.0 1.0 2.5 293 chrX 4893364 intron CG42594 + chrX 4893510 intron CG42594 + chrX 4893657 intron CG42594 + chrX_5_4890001 chrX_4890001 RAL-391_75b 713 chrX 5134797 5134829 chrX 5134896 5134930 7 101 1.5 1.5 1.5 2.8 133 chrX 5134797 intron,intron CG15465 +,rg + chrX 5134864 intron,intron CG15465 +,rg + chrX 5134930 intron,intron CG15465 +,rg + chrX_7_5130001 chrX_5130001 RAL-391_75b 714 chrX 5215098 5215128 chrX 5215184 5215214 7 86 1.0 1.5 1.2 3.2 116 chrX 5215098 intron,intron CG15465 +,rg + chrX 5215156 intron,intron CG15465 +,rg + chrX 5215214 intron,intron CG15465 +,rg + chrX_7_5215001 chrX_5215001 RAL-391_75b 715 chrX 5223716 5223727 chrX 5223794 5223805 5 78 0.0 1.0 0.5 3.3 89 chrX 5223716 intron,intron CG15465 +,rg + chrX 5223760 intron,intron CG15465 +,rg + chrX 5223805 intron,intron CG15465 +,rg + chrX_5_5220001 chrX_5220001 RAL-391_75b 716 chrX 5830644 5830661 chrX 5830721 5830738 4 77 0.5 0.0 0.2 3.3 94 chrX 5830644 intron CG15765 + chrX 5830691 intron CG15765 + chrX 5830738 intron CG15765 + chrX_4_5830001 chrX_5830001 RAL-391_75b 717 chrX 6306553 6306570 chrX 6306630 6306647 5 77 1.5 1.5 1.5 2.0 94 chrX 6306553 3` UTR CG3823 + chrX 6306600 3` UTR CG3823 + chrX 6306647 3` UTR CG3823 + chrX_5_6305001 chrX_6305001 RAL-391_75b 718 chrX 6562826 6562846 chrX 6571307 6571328 Tirant 6 8482 1.5 1.0 1.2 2.7 8502 chrX 6562826 intron CG34417 + chrX 6567077 intron CG34417 + chrX 6571328 intron CG34417 + chrX_6_6565001 chrX_6565001 RAL-391_75b 719 chrX 7023607 7023634 chrX 7030995 7031023 Tabor 5 7389 0.0 0.5 0.2 4.2 7416 chrX 7023607 intron CG12541 - chrX 7027315 intron CG12541 - chrX 7031023 intron CG12541 - chrX_5_7025001 chrX_7025001 RAL-391_75b 720 chrX 7125250 7125278 chrX 7134409 7134437 roo 4 9159 1.0 1.5 1.2 1.8 9187 chrX 7125250 intergenic not near genes chrX 7129844 intergenic not near genes chrX 7134437 intergenic not near genes chrX_4_7125001 chrX_7125001 RAL-391_75b 721 chrX 8031427 8031456 chrX 8035736 8035765 Juan 4 4309 2.0 2.0 2.0 1.3 4338 chrX 8031427 intergenic not near genes chrX 8033596 intergenic not near genes chrX 8035765 3` UTR CG2233 - chrX_4_8030001 chrX_8030001 RAL-391_75b 722 chrX 8038304 8038320 chrX 8038389 8038405 4 85 1.0 3.5 2.2 1.2 101 chrX 8038304 3` UTR fs(1)h - chrX 8038354 3` UTR fs(1)h - chrX 8038405 3` UTR fs(1)h - chrX_4_8035001 chrX_8035001 RAL-391_75b 723 chrX 8305191 8305210 chrX 8305272 8305291 4 81 2.0 1.5 1.8 1.4 100 chrX 8305191 intron nAChRalpha3 - chrX 8305241 intron nAChRalpha3 - chrX 8305291 intron nAChRalpha3 - chrX_4_8305001 chrX_8305001 RAL-391_75b 724 chrX 8894105 8894133 chrX 8894206 8894234 4 100 0.0 1.0 0.5 2.7 129 chrX 8894105 intron Moe - chrX 8894170 intron Moe - chrX 8894234 intron Moe - chrX_4_8890001 chrX_8890001 RAL-391_75b 725 chrX 8922328 8922350 chrX 8922762 8922784 jockey 7 434 2.0 0.0 1.0 3.5 456 chrX 8922328 intron rdgA + chrX 8922556 intron rdgA + chrX 8922784 intron rdgA + chrX_7_8920001 chrX_8920001 RAL-391_75b 726 chrX 9038355 9038381 chrX 9038659 9038685 4 304 0.5 1.5 1.0 2.0 330 chrX 9038355 intron,intron CR43836 -,CG42388 + chrX 9038520 intron,intron CR43836 -,CG42388 + chrX 9038685 intron,intron CR43836 -,CG42388 + chrX_4_9035001 chrX_9035001 RAL-391_75b 727 chrX 9254358 9254389 chrX 9254439 9254470 6 81 1.5 0.5 1.0 3.0 112 chrX 9254358 intron CG17754 + chrX 9254414 intron CG17754 + chrX 9254470 intron CG17754 + chrX_6_9250001 chrX_9250001 RAL-391_75b 728 chrX 9337943 9337972 chrX 9338035 9338064 5 92 1.0 2.5 1.8 1.8 121 chrX 9337943 intron CG34449 - chrX 9338004 intron CG34449 - chrX 9338064 exon CG34449 - chrX_5_9335001 chrX_9335001 RAL-391_75b 729 chrX 9473852 9473887 chrX 9474087 9474122 8 235 0.5 1.5 1.0 4.0 270 chrX 9473852 intron mgl - chrX 9473987 intron mgl - chrX 9474122 intron mgl - chrX_8_9470001 chrX_9470001 RAL-391_75b 730 chrX 9575800 9575821 chrX 9576124 9576145 mdg3 4 324 1.0 1.5 1.2 1.8 345 chrX 9575800 intron,exon CG32699 -,CG42395 - chrX 9575972 intron,intron CG32699 -,CG42395 - chrX 9576145 intron,5` UTR CG32699 -,CG42395 - chrX_4_9575001 chrX_9575001 RAL-391_75b 731 chrX 9599177 9599190 chrX 9599255 9599268 4 77 0.5 1.5 1.0 2.0 91 chrX 9599177 intergenic not near genes chrX 9599222 intergenic not near genes chrX 9599268 intergenic not near genes chrX_4_9595001 chrX_9595001 RAL-391_75b 732 chrX 9819320 9819339 chrX 9819398 9819416 4 78 3.0 0.5 1.8 1.4 96 chrX 9819320 intron CG32698 + chrX 9819368 intron CG32698 + chrX 9819416 intron CG32698 + chrX_4_9815001 chrX_9815001 RAL-391_75b 733 chrX 11069163 11069180 chrX 11069306 11069323 4 143 0.0 0.5 0.2 3.3 160 chrX 11069163 intergenic not near genes chrX 11069243 intergenic not near genes chrX 11069323 intergenic not near genes chrX_4_11065001 chrX_11065001 RAL-391_75b 734 chrX 11268593 11268596 chrX 11270086 11270089 hopper2 4 1493 1.0 1.5 1.2 1.8 1496 chrX 11268593 intron CG44422 - chrX 11269341 intron CG44422 - chrX 11270089 intron CG44422 - chrX_4_11265001 chrX_11265001 RAL-391_75b 735 chrX 11499110 11499134 chrX 11499186 11499212 4 78 1.0 1.0 1.0 2.0 102 chrX 11499110 intron Drak + chrX 11499161 intron Drak + chrX 11499212 intron Drak + chrX_4_11495001 chrX_11495001 RAL-391_75b 736 chrX 11936570 11936583 chrX 11936669 11936682 5 99 0.0 2.5 1.2 2.3 112 chrX 11936570 intron cac - chrX 11936626 intron cac - chrX 11936682 intron cac - chrX_5_11935001 chrX_11935001 RAL-391_75b 737 chrX 12350780 12350806 chrX 12350861 12350887 7 81 0.5 0.0 0.2 5.8 107 chrX 12350780 intergenic not near genes chrX 12350834 intergenic not near genes chrX 12350887 intergenic not near genes chrX_7_12350001 chrX_12350001 RAL-391_75b 738 chrX 12670641 12670666 chrX 12670726 12670753 7 87 0.5 1.0 0.8 3.9 112 chrX 12670641 intron Tis11 + chrX 12670697 intron Tis11 + chrX 12670753 intron Tis11 + chrX_7_12670001 chrX_12670001 RAL-391_75b 739 chrX 12953892 12953923 chrX 12954029 12954061 5 138 0.0 1.0 0.5 3.3 169 chrX 12953892 intron hec - chrX 12953976 intron hec - chrX 12954061 intron hec - chrX_5_12950001 chrX_12950001 RAL-391_75b 740 chrX 13038830 13038859 chrX 13038989 13039019 4 160 0.5 0.5 0.5 2.7 189 chrX 13038830 intron rad + chrX 13038924 intron rad + chrX 13039019 intron rad + chrX_4_13035001 chrX_13035001 RAL-391_75b 741 chrX 13095220 13095247 chrX 13095304 13095333 4 85 0.5 1.0 0.8 2.2 113 chrX 13095220 exon CG2200 + chrX 13095276 exon CG2200 + chrX 13095333 exon CG2200 + chrX_4_13095001 chrX_13095001 RAL-391_75b 742 chrX 13172363 13172377 chrX 13172439 13172453 4 76 1.5 1.5 1.5 1.6 90 chrX 13172363 exon CG34411 - chrX 13172408 intron CG34411 - chrX 13172453 intron CG34411 - chrX_4_13170001 chrX_13170001 RAL-391_75b 743 chrX 13734095 13734111 chrX 13734191 13734207 4 95 3.0 1.5 2.2 1.2 112 chrX 13734095 intron g - chrX 13734151 intron g - chrX 13734207 intron g - chrX_4_13730001 chrX_13730001 RAL-391_75b 744 chrX 13937994 13938009 chrX 13941264 13941280 I-element 4 3271 0.5 0.0 0.2 3.3 3286 chrX 13937994 intron mamo - chrX 13939637 intron mamo - chrX 13941280 intron mamo - chrX_4_13935001 chrX_13935001 RAL-391_75b 745 chrX 14411270 14411285 chrX 14411348 14411363 4 78 0.5 0.0 0.2 3.3 93 chrX 14411270 intron dpr8 + chrX 14411316 intron dpr8 + chrX 14411363 intron dpr8 + chrX_4_14410001 chrX_14410001 RAL-391_75b 746 chrX 15536677 15536702 chrX 15536786 15536811 4 109 0.0 1.5 0.8 2.2 134 chrX 15536677 intron Ac13E - chrX 15536744 intron Ac13E - chrX 15536811 intron Ac13E - chrX_4_15535001 chrX_15535001 RAL-391_75b 747 chrX 15678037 15678063 chrX 15678114 15678140 5 77 0.5 1.0 0.8 2.8 103 chrX 15678037 intergenic CG12708 + chrX 15678088 intergenic CG12708 + chrX 15678140 intergenic CG12708 + chrX_5_15675001 chrX_15675001 RAL-391_75b 748 chrX 16156131 16156147 chrX 16156206 16156223 4 76 1.0 2.0 1.5 1.6 92 chrX 16156131 intergenic not near genes chrX 16156177 intergenic not near genes chrX 16156223 intergenic not near genes chrX_4_16155001 chrX_16155001 RAL-391_75b 749 chrX 16690461 16690477 chrX 16690540 16690556 6 79 0.0 2.0 1.0 3.0 95 chrX 16690461 intron Sep4 - chrX 16690508 intron Sep4 - chrX 16690556 intron Sep4 - chrX_6_16690001 chrX_16690001 RAL-391_75b 750 chrX 16951336 16951356 chrX 16951415 16951436 6 80 0.0 2.5 1.2 2.7 100 chrX 16951336 exon RhoGAP15B + chrX 16951386 exon RhoGAP15B + chrX 16951436 exon RhoGAP15B + chrX_6_16950001 chrX_16950001 RAL-391_75b 751 chrX 17063179 17063199 chrX 17063266 17063286 4 87 1.5 0.5 1.0 2.0 107 chrX 17063179 intron CG45002 - chrX 17063232 intron CG45002 - chrX 17063286 intron CG45002 - chrX_4_17060001 chrX_17060001 RAL-391_75b 752 chrX 17282876 17282905 chrX 17282954 17282983 9 78 2.5 0.0 1.2 4.1 107 chrX 17282876 intron CG5445 + chrX 17282930 5` UTR CG5445 + chrX 17282983 intron CG5445 + chrX_9_17280001 chrX_17280001 RAL-391_75b 753 chrX 17680888 17680916 chrX 17680965 17680993 5 77 2.5 2.0 2.2 1.6 105 chrX 17680888 intron chas - chrX 17680940 intron chas - chrX 17680993 intron chas - chrX_5_17680001 chrX_17680001 RAL-391_75b 754 chrX 18350004 18350021 chrX 18350089 18350106 5 85 1.5 1.0 1.2 2.3 102 chrX 18350004 intron CG6123 - chrX 18350055 intron CG6123 - chrX 18350106 intron CG6123 - chrX_5_18350001 chrX_18350001 RAL-391_75b 755 chrX 18486118 18486143 chrX 18486207 18486232 6 88 1.0 3.5 2.2 1.9 114 chrX 18486118 exon psh - chrX 18486175 intron psh - chrX 18486232 intron psh - chrX_6_18485001 chrX_18485001 RAL-391_75b 756 chrX 19019939 19019967 chrX 19020077 19020094 4 130 0.5 0.0 0.2 3.3 155 chrX 19019939 intron CG43759 + chrX 19020016 intron CG43759 + chrX 19020094 intron CG43759 + chrX_4_19020001 chrX_19020001 RAL-391_75b 757 chrX 19060415 19060430 chrX 19065199 19065214 Doc 4 4784 0.0 1.0 0.5 2.7 4799 chrX 19060415 intron CG14190 + chrX 19062814 intron CG14190 + chrX 19065214 intron CG14190 + chrX_4_19060001 chrX_19060001 RAL-391_75b 758 chrX 19131971 19131997 chrX 19132054 19132080 5 83 0.5 2.5 1.5 2.0 109 chrX 19131971 intergenic not near genes chrX 19132026 intergenic not near genes chrX 19132080 intergenic not near genes chrX_5_19130001 chrX_19130001 RAL-391_75b 759 chrX 13057298 13057300 chrX 19242812 19242814 13 6185514 2.5 5.0 3.8 2.7 6185516 chrX 13057298 intron rad + chrX 16150056 intergenic not near genes chrX 19242814 intergenic not near genes chrX_13_16150001 chrX_16150001 RAL-391_75b 760 chrX 19356989 19357005 chrX 19358430 19358446 NOF 5 1441 0.5 0.0 0.2 4.2 1457 chrX 19356989 intron kek5 + chrX 19357718 intron kek5 + chrX 19358446 intron kek5 + chrX_5_19355001 chrX_19355001 RAL-391_75b 761 chrX 19380160 19380184 chrX 19380401 19380425 pogo 4 241 0.5 0.5 0.5 2.7 265 chrX 19380160 intron kek5 + chrX 19380292 intron kek5 + chrX 19380425 intron kek5 + chrX_4_19380001 chrX_19380001 RAL-391_75b 762 chrX 19472139 19472158 chrX 19472709 19472728 jockey 4 570 2.5 3.0 2.8 1.1 589 chrX 19472139 intergenic kek5 + chrX 19472434 intergenic not near genes chrX 19472728 intergenic not near genes chrX_4_19470001 chrX_19470001 RAL-391_75b 763 chrX 19560680 19560690 chrX 19560779 19560789 4 99 1.5 3.0 2.2 1.2 109 chrX 19560680 3` UTR Grip84 - chrX 19560734 3` UTR Grip84 - chrX 19560789 3` UTR Grip84 - chrX_4_19560001 chrX_19560001 RAL-391_75b 764 chrX 19593950 19593971 chrX 19594035 19594056 5 85 2.5 1.5 2.0 1.7 106 chrX 19593950 exon CG14205 + chrX 19594003 intron CG14205 + chrX 19594056 intron CG14205 + chrX_5_19590001 chrX_19590001 RAL-391_75b 765 chrX 19769509 19769526 chrX 19769586 19769603 8 77 2.5 1.5 2.0 2.7 94 chrX 19769509 intron vfl - chrX 19769556 intron vfl - chrX 19769603 intron vfl - chrX_8_19765001 chrX_19765001 RAL-391_75b 766 chrX 20105198 20105229 chrX 20105301 20105332 13 103 19.0 18.5 18.8 0.7 134 chrX 20105198 intergenic not near genes chrX 20105265 intergenic not near genes chrX 20105332 intergenic not near genes chrX_13_20105001 chrX_20105001 RAL-391_75b 767 chrX 20126888 20126913 chrX 20126966 20126992 4 78 1.5 1.5 1.5 1.6 104 chrX 20126888 intergenic not near genes chrX 20126940 intergenic not near genes chrX 20126992 intergenic not near genes chrX_4_20125001 chrX_20125001 RAL-391_75b 768 chrX 20359137 20359171 chrX 20359215 20359249 8 78 1.5 1.0 1.2 3.6 112 chrX 20359137 intergenic not near genes chrX 20359193 intergenic not near genes chrX 20359249 intergenic not near genes chrX_8_20355001 chrX_20355001 RAL-391_75b 769 chrX 20377326 20377349 chrX 20378793 20378816 hobo 5 1467 2.0 3.0 2.5 1.4 1490 chrX 20377326 intergenic not near genes chrX 20378071 intergenic not near genes chrX 20378816 intergenic not near genes chrX_5_20375001 chrX_20375001 RAL-391_75b 770 chrX 20443170 20443178 chrX 20443246 20443254 4 76 2.5 0.5 1.5 1.6 84 chrX 20443170 exon CG1695 + chrX 20443212 intron CG1695 + chrX 20443254 intron CG1695 + chrX_4_20440001 chrX_20440001 RAL-391_75b 771 chrX 20708382 20708389 chrX 20708459 20708466 4 77 1.5 0.5 1.0 2.0 84 chrX 20708382 intergenic not near genes chrX 20708424 intergenic not near genes chrX 20708466 intergenic not near genes chrX_4_20705001 chrX_20705001 RAL-391_75b 772 chrX 20791562 20791566 chrX 20791662 20791666 5 100 1.5 0.5 1.0 2.5 104 chrX 20791562 intron shakB - chrX 20791614 intron shakB - chrX 20791666 intron shakB - chrX_5_20790001 chrX_20790001 RAL-391_75b 773 chrX 20940730 20940753 chrX 20942199 20942222 hobo 4 1469 0.5 2.0 1.2 1.8 1492 chrX 20940730 intergenic not near genes chrX 20941476 intergenic not near genes chrX 20942222 intergenic not near genes chrX_4_20940001 chrX_20940001 RAL-391_75b 774 chrX 21086130 21086163 chrX 21087159 21087192 jockey 4 1029 2.5 0.0 1.2 1.8 1062 chrX 21086130 intergenic not near genes chrX 21086661 intergenic not near genes chrX 21087192 intergenic not near genes chrX_4_21085001 chrX_21085001 RAL-391_75b 775 chrX 21197062 21197081 chrX 21197137 21197159 5 77 0.5 2.0 1.2 2.3 97 chrX 21197062 intergenic not near genes chrX 21197110 intergenic not near genes chrX 21197159 intergenic not near genes chrX_5_21195001 chrX_21195001 RAL-391_75b 776 chrX 21419703 21419729 chrX 21419791 21419818 4 88 1.0 0.5 0.8 2.2 115 chrX 21419703 intergenic not near genes chrX 21419760 intergenic not near genes chrX 21419818 intergenic not near genes chrX_4_21415001 chrX_21415001 RAL-391_75b 777 chrX 21458692 21458732 chrX 21464128 21464168 Ivk 4 5436 0.0 0.0 0.0 4.0 5476 chrX 21458692 intergenic not near genes chrX 21461430 intergenic not near genes chrX 21464168 intergenic not near genes chrX_4_21460001 chrX_21460001 RAL-391_75b 778 chrX 21668255 21668290 chrX 21668340 21668375 9 85 4.0 3.0 3.5 2.0 120 chrX 21668255 intergenic not near genes chrX 21668315 intergenic not near genes chrX 21668375 intergenic not near genes chrX_9_21665001 chrX_21665001 RAL-391_75b 779 chrX 22677311 22677320 chrX 22677520 22677529 4 209 0.5 1.5 1.0 2.0 218 chrX 22677311 intron CR44997 + chrX 22677420 intron CR44997 + chrX 22677529 intron CR44997 + chrX_4_22675001 chrX_22675001 RAL-391_75b 780 chrX 22697499 22697521 chrX 22701796 22701818 Juan 4 4297 1.0 1.0 1.0 2.0 4319 chrX 22697499 intron CR44997 + chrX 22699658 intron CR44997 + chrX 22701818 intron CR44997 + chrX_4_22695001 chrX_22695001 RAL-391_75b 781 chrX 22987127 22987134 chrX 22989786 22989793 Burdock 4 2658 0.0 0.0 0.0 4.0 2666 chrX 22987127 intron,intron stnA -,stnB - chrX 22988460 intron,intron stnA -,stnB - chrX 22989793 intron,intron stnA -,stnB - chrX_4_22985001 chrX_22985001 RAL-391_75b