SV#	Chr	Chr_coord_5p	Chr_coord_3p	TE	TE_coord_start	TE_coord_end	Reads_collapsed	Chr_Coord_Dist	Symmetry	avg_blat_score	Norm_RefGen_Reads	Coverage_Ratio	classification	comments	insert_code	loci_code	Sym_score	libname
1	chr2L	479747	479791	jockey	4810	4764	12	44	'6-6	70.19	15.6	0.7	intron	ush +	chr2L_12_475001	chr2L_475001	0.50	RAL-38
2	chr2L	1053693	1053793	297	6595	6969	13	100	'3-10	73.36	7.6	1.5	intron	S -	chr2L_13_1050001	chr2L_1050001	0.23	RAL-38
3	chr2L	1342505	1342548	X-element	5	48	11	43	'3-8	57.72	11.5	0.9	intergenic	CG33923 -	chr2L_11_1340001	chr2L_1340001	0.27	RAL-38
4	chr2L	1922569	1922599	BS	5028	4993	8	30	'5-3	51.91	2.9	2.1	intron	CG7337 +	chr2L_8_1920001	chr2L_1920001	0.62	RAL-38
5	chr2L	2205810	2205934	blood	7010	379	33	124	'17-16	64.60	7.5	3.9	exon	CG31668 -	chr2L_33_2205001	chr2L_2205001	0.52	RAL-38
6	chr2L	2262506	2262627	diver	228	3	35	121	'16-19	65.95	4.5	6.4	intergenic	not near genes	chr2L_35_2260001	chr2L_2260001	0.46	RAL-38
7	chr2L	2350225	2350371	Dm88	4382	4378	5	146	'2-3	78.95	3.6	1.1	intron,intron	CG9967 -,eys +	chr2L_5_2350001	chr2L_2350001	0.40	RAL-38
8	chr2L	2538446	2538515	springer	483	482	4	69	'2-2	46.58	8.3	0.4	intergenic	not near genes	chr2L_4_2535001	chr2L_2535001	0.50	RAL-38
9	chr2L	2621553	2621602	BS	5075	5038	19	49	'9-10	63.31	4.5	3.5	intergenic	not near genes	chr2L_19_2620001	chr2L_2620001	0.47	RAL-38
10	chr2L	2859781	2859889	Ivk	5372	1	39	108	'23-16	64.83	7.4	4.6	intron	CG2991 +	chr2L_39_2855001	chr2L_2855001	0.59	RAL-38
11	chr2L	3109703	3109811	412	495	12	8	108	'4-4	70.18	8.7	0.8	intron,5` UTR	toc -,PpD6 +	chr2L_8_3105001	chr2L_3105001	0.50	RAL-38
12	chr2L	3643693	3643804	297	6589	6972	15	111	'7-8	64.78	4.4	2.8	intron	for -	chr2L_15_3640001	chr2L_3640001	0.47	RAL-38
13	chr2L	3895500	3895585	Quasimodo	7352	16	4	85	'2-2	61.95	6.0	0.6	intron	capu -	chr2L_4_3895001	chr2L_3895001	0.50	RAL-38
14	chr2L	4009405	4009529	HMS-Beagle	247	6795	39	124	'15-24	67.87	8.3	4.2	intergenic	CG43774 +	chr2L_39_4005001	chr2L_4005001	0.38	RAL-38
15	chr2L	4019216	4019330	mdg1	7043	419	12	114	'9-3	63.82	3.1	2.9	intergenic	not near genes	chr2L_12_4015001	chr2L_4015001	0.75	RAL-38
16	chr2L	4019886	4019991	jockey	4975	4758	28	105	'16-12	62.29	2.2	8.8	intergenic	not near genes	chr2L_28_4015001	chr2L_4015001	0.57	RAL-38
17	chr2L	4020772	4020885	297	391	6	12	113	'10-2	63.57	4.3	2.3	intergenic	not near genes	chr2L_12_4020001	chr2L_4020001	0.83	RAL-38
18	chr2L	4416809	4416911	Stalker2	12	400	31	102	'16-15	57.57	7.3	3.7	intron	CG15431 -	chr2L_31_4415001	chr2L_4415001	0.52	RAL-38
19	chr2L	4426248	4426358	copia	6	257	31	110	'16-15	66.27	7.0	3.9	intron	CG15431 -	chr2L_31_4425001	chr2L_4425001	0.52	RAL-38
20	chr2L	4693437	4693549	copia	251	4	38	112	'19-19	68.16	11.0	3.2	intergenic	not near genes	chr2L_38_4690001	chr2L_4690001	0.50	RAL-38
21	chr2L	4766727	4766835	hopper	6	1408	27	108	'11-16	62.79	7.4	3.2	intron	CG15630 -	chr2L_27_4765001	chr2L_4765001	0.41	RAL-38
22	chr2L	5574550	5574637	hobo	3	2911	21	87	'14-7	67.42	7.3	2.5	intergenic	not near genes	chr2L_21_5570001	chr2L_5570001	0.67	RAL-38
23	chr2L	5608529	5608704	INE-1	94	83	15	175	'7-8	68.29	3.6	3.3	intron	CG14010 -	chr2L_15_5605001	chr2L_5605001	0.47	RAL-38
24	chr2L	5757390	5757501	hopper	1413	3	11	111	'4-7	68.82	4.5	2.0	intron	CG11030 +	chr2L_11_5755001	chr2L_5755001	0.36	RAL-38
25	chr2L	5790858	5790957	FB	15	3	18	99	'11-7	64.54	5.5	2.8	intron	CG9171 -	chr2L_18_5790001	chr2L_5790001	0.61	RAL-38
26	chr2L	5805841	5805957	hopper	1412	1413	22	116	'8-14	61.86	7.8	2.5	intron	CG11034 +	chr2L_22_5805001	chr2L_5805001	0.36	RAL-38
27	chr2L	5811484	5811563	hobo	1	2920	22	79	'15-7	67.11	9.1	2.2	intergenic	CG43307 +	chr2L_22_5810001	chr2L_5810001	0.68	RAL-38
28	chr2L	6116266	6116348	1360	3	34	12	82	'6-6	68.94	5.8	1.8	intron	stai +	chr2L_12_6115001	chr2L_6115001	0.50	RAL-38
29	chr2L	6214703	6214809	hobo	2930	3	17	106	'4-13	64.86	7.5	2.0	intergenic	not near genes	chr2L_17_6210001	chr2L_6210001	0.24	RAL-38
30	chr2L	6813051	6813169	roo	8664	406	29	118	'14-15	64.75	3.1	7.1	5` UTR	CR44081 +	chr2L_29_6810001	chr2L_6810001	0.48	RAL-38
31	chr2L	6985972	6986085	Burdock	6385	6139	20	113	'11-9	65.67	5.2	3.2	intron,5` UTR	uif -,CR44326 +	chr2L_20_6985001	chr2L_6985001	0.55	RAL-38
32	chr2L	7548072	7548097	mdg3	222	213	12	25	'3-9	66.79	7.9	1.3	intron	RapGAP1 -	chr2L_12_7545001	chr2L_7545001	0.25	RAL-38
33	chr2L	7710682	7710804	297	395	6582	34	122	'21-13	62.08	9.2	3.3	3` UTR	Tep3 +	chr2L_34_7710001	chr2L_7710001	0.62	RAL-38
34	chr2L	7851739	7851907	Stalker2	7506	7508	4	168	'1-3	68.16	4.1	0.8	exon	CG14535 -	chr2L_4_7850001	chr2L_7850001	0.25	RAL-38
35	chr2L	8087817	8087928	412	7538	2	24	111	'10-14	65.83	8.5	2.5	intron	Bsg +	chr2L_24_8085001	chr2L_8085001	0.42	RAL-38
36	chr2L	8100840	8100869	1360	3379	51	7	29	'4-3	60.84	7.7	0.8	intron	Bsg +	chr2L_7_8100001	chr2L_8100001	0.57	RAL-38
37	chr2L	8393357	8393455	roo	21	409	24	98	'10-14	64.03	7.4	2.9	intergenic	lectin-29Ca -,Acp29AB -	chr2L_24_8390001	chr2L_8390001	0.42	RAL-38
38	chr2L	8535149	8535228	P-element	26	2878	21	79	'13-8	40.12	4.8	3.6	intron	CG17834 +	chr2L_21_8535001	chr2L_8535001	0.62	RAL-38
39	chr2L	9052625	9052749	HMS-Beagle	245	5	28	124	'10-18	62.38	8.8	2.9	3` UTR	CG31708 -	chr2L_28_9050001	chr2L_9050001	0.36	RAL-38
40	chr2L	9383550	9383671	copia	20	251	18	121	'14-4	61.75	0.3	13.8	intron	Shawl -	chr2L_18_9380001	chr2L_9380001	0.78	RAL-38
41	chr2L	9385374	9385434	I-element	3	5309	10	60	'7-3	61.93	6.9	1.3	intron	Shawl -	chr2L_10_9385001	chr2L_9385001	0.70	RAL-38
42	chr2L	9438708	9438822	Bari1	6	1707	20	114	'8-12	63.01	6.8	2.6	intron	numb +	chr2L_20_9435001	chr2L_9435001	0.40	RAL-38
43	chr2L	9472265	9472414	3S18	1	371	14	149	'9-5	65.14	7.6	1.6	intergenic	not near genes	chr2L_14_9470001	chr2L_9470001	0.64	RAL-38
44	chr2L	9683842	9683908	Bari1	1670	22	4	66	'1-3	65.53	12.4	0.3	3` UTR	Pka-C1 -	chr2L_4_9680001	chr2L_9680001	0.25	RAL-38
45	chr2L	9948774	9948964	Bari1	11	1623	25	190	'23-2	66.51	7.1	3.1	intergenic	not near genes	chr2L_25_9945001	chr2L_9945001	0.92	RAL-38
46	chr2L	10844165	10844266	Tirant	8108	394	13	101	'3-10	63.91	6.4	1.8	3` UTR,exon	CG17139 -,CG17140 -	chr2L_13_10840001	chr2L_10840001	0.23	RAL-38
47	chr2L	10932085	10932124	jockey	4716	4677	7	39	'4-3	63.58	9.2	0.7	intron	dpr2 -	chr2L_7_10930001	chr2L_10930001	0.57	RAL-38
48	chr2L	11073199	11073317	roo	8665	407	43	118	'23-20	66.68	9.6	4.1	intergenic	not near genes	chr2L_43_11070001	chr2L_11070001	0.53	RAL-38
49	chr2L	11139362	11139477	Stalker2	400	3	42	115	'19-23	66.60	7.0	5.2	exon	Gyc32E -	chr2L_42_11135001	chr2L_11135001	0.45	RAL-38
50	chr2L	11172748	11172847	Juan	4026	4206	44	99	'17-27	63.19	10.4	3.9	intron	Ca-beta -	chr2L_44_11170001	chr2L_11170001	0.39	RAL-38
51	chr2L	11469264	11469365	roo	405	8680	13	101	'6-7	70.20	10.0	1.2	intergenic	not near genes	chr2L_13_11465001	chr2L_11465001	0.46	RAL-38
52	chr2L	11639492	11639607	Burdock	6139	257	11	115	'3-8	66.96	4.1	2.2	intergenic	not near genes	chr2L_11_11635001	chr2L_11635001	0.27	RAL-38
53	chr2L	11942505	11942536	jockey	23	24	9	31	'8-1	59.33	3.5	2.0	intergenic	not near genes	chr2L_9_11940001	chr2L_11940001	0.89	RAL-38
54	chr2L	12035136	12035248	412	493	9	35	112	'20-15	65.44	6.5	4.7	intron	CG18788 +	chr2L_35_12035001	chr2L_12035001	0.57	RAL-38
55	chr2L	12532441	12532475	Bari1	3	38	7	34	'4-3	63.17	10.3	0.6	intron	bun -	chr2L_7_12530001	chr2L_12530001	0.57	RAL-38
56	chr2L	12706686	12706825	hopper	159	154	6	139	'1-5	49.02	5.2	1.0	intergenic	spict +,CG15484 -	chr2L_6_12705001	chr2L_12705001	0.17	RAL-38
57	chr2L	13079224	13079375	F-element	4674	4675	4	151	'2-2	57.54	3.5	0.9	intergenic	not near genes	chr2L_4_13075001	chr2L_13075001	0.50	RAL-38
58	chr2L	13079226	13079384	TART-A	13132	13140	8	158	'1-7	56.98	3.6	1.7	intergenic	not near genes	chr2L_8_13075001	chr2L_13075001	0.12	RAL-38
59	chr2L	13318597	13318632	jockey	4693	4668	12	35	'10-2	65.07	3.9	2.4	intron	CG43778 -	chr2L_12_13315001	chr2L_13315001	0.83	RAL-38
60	chr2L	13423026	13423139	roo	9063	8663	25	113	'7-18	66.30	7.7	2.9	5` UTR	CG42784 +	chr2L_25_13420001	chr2L_13420001	0.28	RAL-38
61	chr2L	13585703	13585821	17.6	3	491	12	118	'3-9	68.79	7.7	1.4	intron	kuz +	chr2L_12_13585001	chr2L_13585001	0.25	RAL-38
62	chr2L	13686165	13686280	297	6589	395	14	115	'5-9	67.39	4.5	2.5	intron	CG31814 -	chr2L_14_13685001	chr2L_13685001	0.36	RAL-38
63	chr2L	13763465	13763574	Bari1	1703	10	21	109	'16-5	64.99	5.6	3.2	intron	TM9SF4 +	chr2L_21_13760001	chr2L_13760001	0.76	RAL-38
64	chr2L	14002660	14002774	412	489	3	4	114	'3-1	66.10	8.6	0.4	intergenic	not near genes	chr2L_4_14000001	chr2L_14000001	0.75	RAL-38
65	chr2L	14024637	14024675	jockey	59	11	8	38	'3-5	61.72	2.5	2.3	intergenic	not near genes	chr2L_8_14020001	chr2L_14020001	0.38	RAL-38
66	chr2L	14048711	14048820	blood	4	369	24	109	'17-7	62.08	4.9	4.1	intron,exon	nAChRalpha5 +,NimC4 +	chr2L_24_14045001	chr2L_14045001	0.71	RAL-38
67	chr2L	14215145	14215369	roo	8670	8975	14	224	'13-1	66.02	5.1	2.3	intron	Dyrk2 -	chr2L_14_14215001	chr2L_14215001	0.93	RAL-38
68	chr2L	14381264	14381378	Ivk	5381	1	56	114	'29-27	67.54	9.6	5.3	intergenic	ppk -	chr2L_56_14380001	chr2L_14380001	0.52	RAL-38
69	chr2L	14516623	14516741	pogo	2098	2	29	118	'13-16	66.42	7.1	3.6	intergenic	not near genes	chr2L_29_14515001	chr2L_14515001	0.45	RAL-38
70	chr2L	14583808	14583917	pogo	2089	3	15	109	'1-14	69.96	11.1	1.2	intergenic	not near genes	chr2L_15_14580001	chr2L_14580001	0.07	RAL-38
71	chr2L	14615673	14615798	S-element	6	1701	29	125	'12-17	66.35	6.7	3.8	intron,intron,intron	osp -,Adh +,Adhr +	chr2L_29_14615001	chr2L_14615001	0.41	RAL-38
72	chr2L	15534729	15534832	roo	393	8666	23	103	'4-19	66.57	7.7	2.6	intergenic	not near genes	chr2L_23_15530001	chr2L_15530001	0.17	RAL-38
73	chr2L	15897965	15898053	Bari1	31	1701	7	88	'2-5	61.05	9.8	0.6	intergenic	not near genes	chr2L_7_15895001	chr2L_15895001	0.29	RAL-38
74	chr2L	16222068	16222159	I-element	3	5340	28	91	'14-14	65.59	5.3	4.4	intergenic	not near genes	chr2L_28_16220001	chr2L_16220001	0.50	RAL-38
75	chr2L	16253564	16253682	roo	412	8670	28	118	'15-13	70.41	9.4	2.7	intron	PRL-1 -	chr2L_28_16250001	chr2L_16250001	0.54	RAL-38
76	chr2L	16565421	16565539	297	6580	394	12	118	'6-6	71.48	3.1	2.9	intron	CG42389 +	chr2L_12_16565001	chr2L_16565001	0.50	RAL-38
77	chr2L	16623986	16624077	412	494	7084	4	91	'3-1	65.73	10.0	0.4	intron	CG42389 +	chr2L_4_16620001	chr2L_16620001	0.75	RAL-38
78	chr2L	17134698	17134814	flea	5010	4756	38	116	'20-18	65.32	7.4	4.5	intron,intron	CG34106 +,beat-IIIa +	chr2L_38_17130001	chr2L_17130001	0.53	RAL-38
79	chr2L	17280695	17280788	297	6592	389	7	93	'3-4	61.58	4.3	1.3	intergenic	CR45729 +	chr2L_7_17280001	chr2L_17280001	0.43	RAL-38
80	chr2L	17425721	17425827	Rt1b	127	122	7	106	'2-5	67.67	7.1	0.9	intron	Dif -	chr2L_7_17425001	chr2L_17425001	0.29	RAL-38
81	chr2L	17704917	17705020	hopper	1	17	16	103	'9-7	64.57	4.4	3.0	intron,intron	CadN -,CG43231 +	chr2L_16_17700001	chr2L_17700001	0.56	RAL-38
82	chr2L	17762756	17762803	F-element	20	23	16	47	'8-8	64.91	11.9	1.2	intron	CadN -	chr2L_16_17760001	chr2L_17760001	0.50	RAL-38
83	chr2L	18024337	18024438	blood	7030	376	20	101	'12-8	64.65	7.7	2.3	intron	rdo +	chr2L_20_18020001	chr2L_18020001	0.60	RAL-38
84	chr2L	18032604	18032649	Rt1b	298	341	14	45	'6-8	63.09	12.0	1.1	intron	rdo +	chr2L_14_18030001	chr2L_18030001	0.43	RAL-38
85	chr2L	18100598	18100712	roo	401	8663	23	114	'3-20	67.27	5.3	3.7	intergenic	not near genes	chr2L_23_18100001	chr2L_18100001	0.13	RAL-38
86	chr2L	18178804	18178908	hopper	188	2	24	104	'10-14	59.96	5.2	3.9	intron	CG42750 -	chr2L_24_18175001	chr2L_18175001	0.42	RAL-38
87	chr2L	18286129	18286176	Doc	13	10	26	47	'12-14	61.86	5.2	4.2	intergenic	CG31787 -	chr2L_26_18285001	chr2L_18285001	0.46	RAL-38
88	chr2L	18429060	18429165	Quasimodo	7	7359	12	105	'5-7	65.69	6.2	1.7	intergenic	not near genes	chr2L_12_18425001	chr2L_18425001	0.42	RAL-38
89	chr2L	18570471	18570567	FB	12	4	21	96	'7-14	66.98	4.3	4.0	intron	Pde11 -	chr2L_21_18570001	chr2L_18570001	0.33	RAL-38
90	chr2L	18604314	18604434	297	394	2	27	120	'17-10	71.27	7.4	3.2	intron	CG10413 -	chr2L_27_18600001	chr2L_18600001	0.63	RAL-38
91	chr2L	18612209	18612326	Transpac	309	4923	30	117	'18-12	68.65	8.0	3.3	5` UTR	Atac2 -	chr2L_30_18610001	chr2L_18610001	0.60	RAL-38
92	chr2L	18844850	18844951	roo	405	8681	27	101	'12-15	67.03	1.8	9.6	intergenic	CG33120 -,CG17321 +	chr2L_27_18840001	chr2L_18840001	0.44	RAL-38
93	chr2L	18928326	18928374	blood	7010	7058	19	48	'9-10	64.40	5.6	2.9	intron	ssp3 -	chr2L_19_18925001	chr2L_18925001	0.47	RAL-38
94	chr2L	18993280	18993392	roo	4	404	34	112	'16-18	68.90	6.3	4.7	intergenic	CG10650 -	chr2L_34_18990001	chr2L_18990001	0.47	RAL-38
95	chr2L	19144731	19144763	roo	409	9040	13	32	'6-7	63.05	14.2	0.9	intron	brat +	chr2L_13_19140001	chr2L_19140001	0.46	RAL-38
96	chr2L	19212245	19212355	flea	5009	4763	18	110	'16-2	67.14	9.9	1.7	intergenic	not near genes	chr2L_18_19210001	chr2L_19210001	0.89	RAL-38
97	chr2L	19442005	19442103	S-element	1708	1708	4	98	'1-3	66.37	5.5	0.6	intron,5` UTR	CG10237 -,RanGAP +	chr2L_4_19440001	chr2L_19440001	0.25	RAL-38
98	chr2L	19791911	19792014	BS	5085	2	40	103	'18-22	63.98	10.0	3.6	intergenic	CdGAPr -,CG10466 +	chr2L_40_19790001	chr2L_19790001	0.45	RAL-38
99	chr2L	19817822	19817847	G4	3830	3805	7	25	'4-3	68.12	17.0	0.4	intron	sick +	chr2L_7_19815001	chr2L_19815001	0.57	RAL-38
100	chr2L	20228721	20228767	Tc3	310	308	4	46	'3-1	71.31	7.4	0.5	intergenic	not near genes	chr2L_4_20225001	chr2L_20225001	0.75	RAL-38
101	chr2L	20372133	20372222	Transpac	4919	5196	25	89	'19-6	69.17	4.6	4.5	intergenic	Ugt37a1 -	chr2L_25_20370001	chr2L_20370001	0.76	RAL-38
102	chr2L	20597677	20597721	X-element	22	73	9	44	'3-6	65.57	6.5	1.2	intron	CR44909 -	chr2L_9_20595001	chr2L_20595001	0.33	RAL-38
103	chr2L	20809568	20809666	roo	398	12	38	98	'21-17	66.74	7.7	4.4	intron	CG9328 +	chr2L_38_20805001	chr2L_20805001	0.55	RAL-38
104	chr2L	20900466	20900575	copia	4875	250	21	109	'4-17	65.94	6.9	2.7	intron,intron	CG43739 -,sky -	chr2L_21_20900001	chr2L_20900001	0.19	RAL-38
105	chr2L	20968619	20968702	Bari1	1692	27	6	83	'5-1	60.53	7.5	0.7	intron	CG42238 -	chr2L_6_20965001	chr2L_20965001	0.83	RAL-38
106	chr2L	21073766	21073962	roo	408	8687	29	196	'27-2	70.61	5.4	4.5	intergenic	not near genes	chr2L_29_21070001	chr2L_21070001	0.93	RAL-38
107	chr2L	21278951	21279025	Bari1	144	1666	7	74	'4-3	67.51	14.3	0.5	intron	CG8671 +	chr2L_7_21275001	chr2L_21275001	0.57	RAL-38
108	chr2L	21335290	21335372	INE-1	571	542	5	82	'2-3	62.05	5.6	0.8	intron	dimm +	chr2L_5_21335001	chr2L_21335001	0.40	RAL-38
109	chr2L	21396862	21396981	gypsy5	6941	409	22	119	'13-9	63.71	9.5	2.1	intergenic	not near genes	chr2L_22_21395001	chr2L_21395001	0.59	RAL-38
110	chr2L	21570225	21570270	Dm88	4406	6	18	45	'11-7	68.40	4.8	3.1	intergenic	not near genes	chr2L_18_21570001	chr2L_21570001	0.61	RAL-38
111	chr2L	21636606	21636642	roo	9030	29	6	36	'4-2	76.61	5.5	0.9	intron	Ac3 +	chr2L_6_21635001	chr2L_21635001	0.67	RAL-38
112	chr2L	21675182	21675227	HB	172	1429	4	45	'1-3	56.56	10.1	0.4	intron	CG2225 -	chr2L_4_21675001	chr2L_21675001	0.25	RAL-38
113	chr2L	21687106	21687152	mariner2	841	888	4	46	'3-1	69.83	6.6	0.5	intron	CG31619 +	chr2L_4_21685001	chr2L_21685001	0.75	RAL-38
114	chr2L	21734992	21735028	17.6	6	6969	8	36	'4-4	67.50	5.8	1.2	intergenic	not near genes	chr2L_8_21730001	chr2L_21730001	0.50	RAL-38
115	chr2L	22108165	22108269	Transib-N1_DM	44	23	11	104	'2-9	71.61	15.7	0.7	intergenic	not near genes	chr2L_11_22105001	chr2L_22105001	0.18	RAL-38
116	chr2L	22134227	22134341	P-element	2873	2878	9	114	'4-5	49.80	3.7	1.9	intergenic	CG42748 +	chr2L_9_22130001	chr2L_22130001	0.44	RAL-38
117	chr2L	22369165	22369250	297	13	6966	9	85	'1-8	66.83	3.0	2.2	intergenic	CG17018 +	chr2L_9_22365001	chr2L_22365001	0.11	RAL-38
118	chr2L	22497659	22497841	invader1	334	144	4	182	'2-2	66.31	4.5	0.7	intergenic	not near genes	chr2L_4_22495001	chr2L_22495001	0.50	RAL-38
119	chr2L	22575608	22575697	blood	7030	379	22	89	'3-19	66.83	8.0	2.4	intergenic	not near genes	chr2L_22_22575001	chr2L_22575001	0.14	RAL-38
120	chr2L	22640190	22640278	roo	8664	9039	10	88	'2-8	74.92	1.9	3.4	intron	CG40006 -	chr2L_10_22640001	chr2L_22640001	0.20	RAL-38
121	chr2L	22645346	22645384	297	221	219	13	38	'8-5	54.87	17.1	0.7	intron	CG40006 -	chr2L_13_22645001	chr2L_22645001	0.62	RAL-38
122	chr2L	23076462	23076491	invader4	19	5	10	29	'8-2	60.46	6.2	1.4	intergenic	not near genes	chr2L_10_23075001	chr2L_23075001	0.80	RAL-38
123	chr2R	291651	291758	412	485	6	14	107	'10-4	61.85	6.7	1.8	intergenic	not near genes	chr2R_14_290001	chr2R_290001	0.71	RAL-38
124	chr2R	544776	544885	HMS-Beagle	6798	7039	24	109	'17-7	65.05	6.3	3.3	intron	CG40378 +	chr2R_24_540001	chr2R_540001	0.71	RAL-38
125	chr2R	969157	969220	mdg1	7074	7438	24	63	'10-14	67.38	9.9	2.2	intergenic	not near genes	chr2R_24_965001	chr2R_965001	0.42	RAL-38
126	chr2R	1512855	1512948	1360	43	7	4	93	'1-3	69.47	46.4	0.1	3` UTR	Maf1 -	chr2R_4_1510001	chr2R_1510001	0.25	RAL-38
127	chr2R	1516574	1516601	Transpac	4919	27	10	27	'3-7	62.74	50.5	0.2	exon	Maf1 -	chr2R_10_1515001	chr2R_1515001	0.30	RAL-38
128	chr2R	2879971	2880059	TLD2_LTR	49	161	7	88	'5-2	66.33	7.4	0.8	intergenic	not near genes	chr2R_7_2875001	chr2R_2875001	0.71	RAL-38
129	chr2R	2949017	2949122	17.6	7418	6943	19	105	'13-6	68.14	5.5	2.9	intron	Scp1 -	chr2R_19_2945001	chr2R_2945001	0.68	RAL-38
130	chr2R	3009425	3009530	pogo	7	2087	18	105	'11-7	67.66	3.9	3.7	intergenic	not near genes	chr2R_18_3005001	chr2R_3005001	0.61	RAL-38
131	chr2R	3065323	3065401	Quasimodo	22	7356	7	78	'4-3	67.06	5.8	1.0	intergenic	not near genes	chr2R_7_3065001	chr2R_3065001	0.57	RAL-38
132	chr2R	4559053	4559144	pogo	20	2088	12	91	'9-3	68.19	3.5	2.7	intron	Stlk +	chr2R_12_4555001	chr2R_4555001	0.75	RAL-38
133	chr2R	4906310	4906398	Ivk	8	5374	24	88	'13-11	61.94	6.5	3.2	intron	CG44102 -	chr2R_24_4905001	chr2R_4905001	0.54	RAL-38
134	chr2R	5214949	5214991	F-element	15	22	14	42	'9-5	57.58	11.7	1.1	intron	Nipped-A -	chr2R_14_5210001	chr2R_5210001	0.64	RAL-38
135	chr2R	5301701	5301808	1360	2	3379	21	107	'10-11	67.30	4.5	3.8	intergenic	not near genes	chr2R_21_5300001	chr2R_5300001	0.48	RAL-38
136	chr2R	5303126	5303174	FB	221	155	5	48	'3-2	65.34	4.3	0.9	intergenic	not near genes	chr2R_5_5300001	chr2R_5300001	0.60	RAL-38
137	chr2R	5667315	5667354	jockey	27	23	9	39	'3-6	61.31	9.8	0.8	intergenic	not near genes	chr2R_9_5665001	chr2R_5665001	0.33	RAL-38
138	chr2R	5674628	5674741	S-element	1	1703	19	113	'8-11	66.00	4.8	3.3	intergenic	not near genes	chr2R_19_5670001	chr2R_5670001	0.42	RAL-38
139	chr2R	5865176	5865290	roo	8663	9063	41	114	'28-13	66.21	6.2	5.7	intergenic	not near genes	chr2R_41_5865001	chr2R_5865001	0.68	RAL-38
140	chr2R	6102932	6103046	hopper	3	1411	24	114	'12-12	67.04	6.1	3.4	intron	EcR -	chr2R_24_6100001	chr2R_6100001	0.50	RAL-38
141	chr2R	6223193	6223528	copia	6	4971	27	335	'26-1	64.23	4.8	4.7	intron	bin3 +	chr2R_27_6220001	chr2R_6220001	0.96	RAL-38
142	chr2R	6271511	6271552	rover	7192	202	4	41	'3-1	72.35	50.2	0.1	intergenic	not near genes	chr2R_4_6270001	chr2R_6270001	0.75	RAL-38
143	chr2R	6629972	6630010	Stalker3T	203	202	18	38	'17-1	55.99	17.8	1.0	intron	Vha16-1 -	chr2R_18_6625001	chr2R_6625001	0.94	RAL-38
144	chr2R	6779748	6779852	17.6	489	10	29	104	'19-10	68.23	9.6	2.7	intron,3` UTR	Epac -,Cyp6a2 -	chr2R_29_6775001	chr2R_6775001	0.66	RAL-38
145	chr2R	7112092	7112192	I-element	5348	3	32	100	'18-14	62.37	7.0	4.0	intron	esn +	chr2R_32_7110001	chr2R_7110001	0.56	RAL-38
146	chr2R	7225880	7225990	hopper	1412	1408	22	110	'14-8	64.39	7.7	2.5	intergenic	not near genes	chr2R_22_7225001	chr2R_7225001	0.64	RAL-38
147	chr2R	7317736	7317776	BS	5087	5047	21	40	'9-12	59.45	9.7	2.0	intergenic	Dscam1 -	chr2R_21_7315001	chr2R_7315001	0.43	RAL-38
148	chr2R	7419679	7419795	hopper	2	3	37	116	'14-23	66.94	6.7	4.8	5` UTR	so +	chr2R_37_7415001	chr2R_7415001	0.38	RAL-38
149	chr2R	7514018	7514081	Tc3	315	310	6	63	'2-4	72.73	11.5	0.5	3` UTR	CG1603 -	chr2R_6_7510001	chr2R_7510001	0.33	RAL-38
150	chr2R	7621334	7621452	mdg1	7039	419	39	118	'22-17	66.90	7.3	4.7	intergenic	not near genes	chr2R_39_7620001	chr2R_7620001	0.56	RAL-38
151	chr2R	8086851	8086962	1360	2	3383	28	111	'11-17	67.89	5.4	4.4	3` UTR	sut1 +	chr2R_28_8085001	chr2R_8085001	0.39	RAL-38
152	chr2R	8086891	8086967	Tc3	318	238	5	76	'1-4	78.52	5.6	0.8	3` UTR	sut1 +	chr2R_5_8085001	chr2R_8085001	0.20	RAL-38
153	chr2R	8310862	8310934	pogo	2059	3	15	72	'5-10	67.63	6.2	2.1	3` UTR	CR44449 -	chr2R_15_8310001	chr2R_8310001	0.33	RAL-38
154	chr2R	8467539	8467660	roo	8664	409	43	121	'22-21	68.54	8.4	4.6	3` UTR	Mal-A6 +	chr2R_43_8465001	chr2R_8465001	0.51	RAL-38
155	chr2R	9050278	9050361	jockey2	3284	3288	8	83	'3-5	52.59	7.7	0.9	intron	CG13743 -	chr2R_8_9050001	chr2R_9050001	0.38	RAL-38
156	chr2R	9270506	9270592	Tirant	396	8135	23	86	'16-7	66.19	7.3	2.8	intron	Pkn -	chr2R_23_9270001	chr2R_9270001	0.70	RAL-38
157	chr2R	9553403	9553501	P-element	5	15	23	98	'13-10	52.27	8.8	2.3	5` UTR	CR43651 +	chr2R_23_9550001	chr2R_9550001	0.57	RAL-38
158	chr2R	9681795	9681905	FB	1	1	20	110	'8-12	66.77	9.6	1.9	intron	Mmp2 -	chr2R_20_9680001	chr2R_9680001	0.40	RAL-38
159	chr2R	9778935	9779053	blood	1	7387	33	118	'17-16	66.63	5.9	4.8	intron	CG1688 -	chr2R_33_9775001	chr2R_9775001	0.52	RAL-38
160	chr2R	9870919	9871073	roo	9045	26	26	154	'5-21	69.66	6.2	3.6	intron	cbx -	chr2R_26_9870001	chr2R_9870001	0.19	RAL-38
161	chr2R	10393775	10393886	Max-element	8242	300	32	111	'15-17	62.57	8.4	3.4	intron	CG42732 -	chr2R_32_10390001	chr2R_10390001	0.47	RAL-38
162	chr2R	10413066	10413164	FB	3	12	30	98	'18-12	64.72	2.4	8.8	intron	CG42732 -	chr2R_30_10410001	chr2R_10410001	0.60	RAL-38
163	chr2R	10436566	10436662	mdg3	5249	5472	23	96	'19-4	64.18	6.2	3.2	3` UTR	RanBPM +	chr2R_23_10435001	chr2R_10435001	0.83	RAL-38
164	chr2R	10439956	10440063	FB	9	1	28	107	'18-10	63.87	5.8	4.1	intron	Galphao +	chr2R_28_10435001	chr2R_10435001	0.64	RAL-38
165	chr2R	10656531	10656565	F-element	24	58	9	34	'4-5	59.48	4.0	1.8	intergenic	CR44452 -	chr2R_9_10655001	chr2R_10655001	0.44	RAL-38
166	chr2R	10743826	10743938	hopper	1410	1411	25	112	'10-15	65.81	8.9	2.5	intron	CG33144 -	chr2R_25_10740001	chr2R_10740001	0.40	RAL-38
167	chr2R	11155346	11155452	flea	4760	243	35	106	'20-15	68.04	11.0	2.9	intron	CG13229 -	chr2R_35_11155001	chr2R_11155001	0.57	RAL-38
168	chr2R	11180430	11180479	Tc1	61	162	5	49	'4-1	60.21	0.8	2.8	intron	shn +	chr2R_5_11180001	chr2R_11180001	0.80	RAL-38
169	chr2R	11185954	11186065	Bari1	1706	13	10	111	'6-4	63.04	4.8	1.7	intron	shn +	chr2R_10_11185001	chr2R_11185001	0.60	RAL-38
170	chr2R	11204266	11204385	copia	1	255	43	119	'22-21	68.30	9.0	4.3	intron	shn +	chr2R_43_11200001	chr2R_11200001	0.51	RAL-38
171	chr2R	11575013	11575193	INE-1	147	135	15	180	'6-9	62.23	2.4	4.4	intergenic	not near genes	chr2R_15_11575001	chr2R_11575001	0.40	RAL-38
172	chr2R	12185318	12185427	accord	7377	1	25	109	'11-14	65.99	16.1	1.5	3` UTR,3` UTR	CG13175 +,CG33964 +	chr2R_25_12185001	chr2R_12185001	0.44	RAL-38
173	chr2R	12336626	12336673	pogo	15	3	15	47	'9-6	67.93	5.7	2.2	intergenic	CG34021 +,CG8490 +	chr2R_15_12335001	chr2R_12335001	0.60	RAL-38
174	chr2R	12369650	12369690	I-element	5348	5308	10	40	'5-5	62.83	12.1	0.8	exon	CG33012 +	chr2R_10_12365001	chr2R_12365001	0.50	RAL-38
175	chr2R	12491483	12491602	roo	8663	405	39	119	'20-19	68.17	7.0	4.9	intron	fdl -	chr2R_39_12490001	chr2R_12490001	0.51	RAL-38
176	chr2R	12602735	12602778	roo	360	9066	17	43	'11-6	65.36	5.2	2.7	intron	Amph +	chr2R_17_12600001	chr2R_12600001	0.65	RAL-38
177	chr2R	12828486	12828533	I-element	5278	5301	25	47	'9-16	67.37	13.3	1.7	intergenic	not near genes	chr2R_25_12825001	chr2R_12825001	0.36	RAL-38
178	chr2R	13043411	13043511	Max-element	8234	284	24	100	'17-7	62.67	7.4	2.9	intergenic	not near genes	chr2R_24_13040001	chr2R_13040001	0.71	RAL-38
179	chr2R	13528612	13528642	jockey	9	32	5	30	'3-2	62.74	15.8	0.3	intron	Vmat -	chr2R_5_13525001	chr2R_13525001	0.60	RAL-38
180	chr2R	13540159	13540337	G7	1145	1146	4	178	'1-3	72.63	4.4	0.7	intron	CG6145 -	chr2R_4_13540001	chr2R_13540001	0.25	RAL-38
181	chr2R	13540879	13540978	S-element	1693	1714	19	99	'6-13	67.89	5.0	3.2	intron	CG6145 -	chr2R_19_13540001	chr2R_13540001	0.32	RAL-38
182	chr2R	13699415	13699467	jockey	6	56	7	52	'6-1	69.23	5.8	1.0	intron	fas +	chr2R_7_13695001	chr2R_13695001	0.86	RAL-38
183	chr2R	13763978	13764109	opus	111	499	9	131	'5-4	66.76	7.3	1.1	intergenic	not near genes	chr2R_9_13760001	chr2R_13760001	0.56	RAL-38
184	chr2R	13898426	13898452	Stalker3T	205	200	9	26	'3-6	62.78	5.8	1.3	intron	shot -	chr2R_9_13895001	chr2R_13895001	0.33	RAL-38
185	chr2R	13961671	13961779	opus	7495	8	28	108	'19-9	67.19	8.7	2.9	intron	Cp1 +	chr2R_28_13960001	chr2R_13960001	0.68	RAL-38
186	chr2R	14235461	14235551	I-element	5347	11	29	90	'20-9	67.33	9.1	2.9	intergenic	Opa1 -,CG8485 -	chr2R_29_14235001	chr2R_14235001	0.69	RAL-38
187	chr2R	14482994	14483076	Juan	4177	4120	16	82	'1-15	57.90	7.8	1.8	intron	L +	chr2R_16_14480001	chr2R_14480001	0.06	RAL-38
188	chr2R	14484767	14484914	1360	3352	9	33	147	'12-21	66.06	7.2	4.0	intron	L +	chr2R_33_14480001	chr2R_14480001	0.36	RAL-38
189	chr2R	14577067	14577162	hobo	9	2709	16	95	'13-3	67.59	5.8	2.4	intron	ttv +	chr2R_16_14575001	chr2R_14575001	0.81	RAL-38
190	chr2R	14713590	14713684	P-element	2869	1	21	94	'13-8	53.69	8.4	2.2	5` UTR	mspo -	chr2R_21_14710001	chr2R_14710001	0.62	RAL-38
191	chr2R	14848985	14849028	flea	4730	4697	17	43	'7-10	66.26	18.7	0.9	exon	SMC2 -	chr2R_17_14845001	chr2R_14845001	0.41	RAL-38
192	chr2R	15114716	15114834	3S18	6104	5766	33	118	'9-24	64.27	9.4	3.2	intergenic	not near genes	chr2R_33_15110001	chr2R_15110001	0.27	RAL-38
193	chr2R	15150276	15150381	flea	5002	4761	38	105	'21-17	64.14	10.4	3.3	intergenic	not near genes	chr2R_38_15150001	chr2R_15150001	0.55	RAL-38
194	chr2R	15374754	15374796	1360	12	412	6	42	'2-4	62.11	3.8	1.2	intergenic	not near genes	chr2R_6_15370001	chr2R_15370001	0.33	RAL-38
195	chr2R	15597230	15597330	Max-element	8237	286	16	100	'9-7	57.14	3.7	3.4	intergenic	not near genes	chr2R_16_15595001	chr2R_15595001	0.56	RAL-38
196	chr2R	15848300	15848398	Bari1	1697	17	4	98	'2-2	60.79	13.8	0.3	intron	tun +	chr2R_4_15845001	chr2R_15845001	0.50	RAL-38
197	chr2R	16253197	16253321	blood	7009	378	36	124	'19-17	64.34	7.0	4.5	intron	CngA -	chr2R_36_16250001	chr2R_16250001	0.53	RAL-38
198	chr2R	16422158	16422261	1360	3381	3386	21	103	'9-12	67.50	7.2	2.6	intron	Sema-2b +	chr2R_21_16420001	chr2R_16420001	0.43	RAL-38
199	chr2R	16777177	16777295	297	3	393	16	118	'5-11	66.20	5.7	2.4	intergenic	not near genes	chr2R_16_16775001	chr2R_16775001	0.31	RAL-38
200	chr2R	16967319	16967406	roo	13	389	25	87	'9-16	68.10	7.9	2.8	intergenic	not near genes	chr2R_25_16965001	chr2R_16965001	0.36	RAL-38
201	chr2R	17193019	17193114	hobo	3	2920	20	95	'12-8	64.22	7.1	2.5	intergenic	not near genes	chr2R_20_17190001	chr2R_17190001	0.60	RAL-38
202	chr2R	17268776	17268821	FB	16	17	12	45	'6-6	58.70	4.8	2.1	intron	mbl +	chr2R_12_17265001	chr2R_17265001	0.50	RAL-38
203	chr2R	17327957	17328058	pogo	2083	3	8	101	'5-3	63.19	8.9	0.8	intron	mbl +	chr2R_8_17325001	chr2R_17325001	0.62	RAL-38
204	chr2R	17942439	17942532	I-element	2	5347	16	93	'6-10	63.41	5.4	2.5	intergenic	not near genes	chr2R_16_17940001	chr2R_17940001	0.38	RAL-38
205	chr2R	18045657	18045697	jockey	4982	4942	20	40	'12-8	62.38	9.0	2.0	intergenic	not near genes	chr2R_20_18045001	chr2R_18045001	0.60	RAL-38
206	chr2R	18047960	18048089	jockey	4762	4931	39	129	'31-8	62.92	8.8	4.0	intergenic	CG34005 +,CG5767 -	chr2R_39_18045001	chr2R_18045001	0.79	RAL-38
207	chr2R	18343546	18343664	roo	403	8661	29	118	'6-23	67.58	5.1	4.8	intron	sbb -	chr2R_29_18340001	chr2R_18340001	0.21	RAL-38
208	chr2R	18372595	18372639	jockey	7	32	9	44	'8-1	65.42	0.3	6.9	intergenic	not near genes	chr2R_9_18370001	chr2R_18370001	0.89	RAL-38
209	chr2R	18764848	18764950	opus	16	498	15	102	'4-11	63.73	8.4	1.6	intron	Mctp +	chr2R_15_18760001	chr2R_18760001	0.27	RAL-38
210	chr2R	18807861	18807907	jockey	4809	4763	20	46	'10-10	69.84	11.8	1.6	intergenic	CG15096 -	chr2R_20_18805001	chr2R_18805001	0.50	RAL-38
211	chr2R	19046279	19046388	opus	4	7492	14	109	'7-7	68.18	9.5	1.3	intergenic	not near genes	chr2R_14_19045001	chr2R_19045001	0.50	RAL-38
212	chr2R	19166610	19166703	FB	10	13	29	93	'16-13	70.08	6.4	3.9	intron	CG10737 +	chr2R_29_19165001	chr2R_19165001	0.55	RAL-38
213	chr2R	19253688	19253935	jockey	4918	7	35	247	'1-34	65.22	5.5	5.4	intergenic	CG33453 -	chr2R_35_19250001	chr2R_19250001	0.03	RAL-38
214	chr2R	19506005	19506120	mdg1	7038	7457	35	115	'12-23	65.26	4.0	7.0	intergenic	not near genes	chr2R_35_19505001	chr2R_19505001	0.34	RAL-38
215	chr2R	19619877	19619964	hopper	9	19	6	87	'5-1	61.27	3.3	1.4	intron	sm -	chr2R_6_19615001	chr2R_19615001	0.83	RAL-38
216	chr2R	20196784	20196898	blood	7388	6	41	114	'20-21	64.69	9.2	4.0	intergenic	not near genes	chr2R_41_20195001	chr2R_20195001	0.49	RAL-38
217	chr2R	20581789	20581882	Bari1	25	1700	8	93	'2-6	65.31	8.8	0.8	intron	qsm -	chr2R_8_20580001	chr2R_20580001	0.25	RAL-38
218	chr2R	20712402	20712528	roo	8660	410	38	126	'27-11	67.04	7.3	4.6	intron	dpr +	chr2R_38_20710001	chr2R_20710001	0.71	RAL-38
219	chr2R	20952089	20952176	opus	7497	4	10	87	'5-5	66.60	11.2	0.8	intergenic	not near genes	chr2R_10_20950001	chr2R_20950001	0.50	RAL-38
220	chr2R	21352495	21352601	roo	6	400	17	106	'14-3	63.04	5.2	2.7	intergenic	not near genes	chr2R_17_21350001	chr2R_21350001	0.82	RAL-38
221	chr2R	21435497	21435567	jockey	28	4986	14	70	'5-9	57.43	6.1	2.0	intron	Sdc -	chr2R_14_21435001	chr2R_21435001	0.36	RAL-38
222	chr2R	21497562	21497673	P-element	2	2882	27	111	'14-13	47.72	6.1	3.8	intron	Fkbp14 -	chr2R_27_21495001	chr2R_21495001	0.52	RAL-38
223	chr2R	21736530	21736645	blood	7018	378	17	115	'12-5	64.73	6.6	2.2	intergenic	not near genes	chr2R_17_21735001	chr2R_21735001	0.71	RAL-38
224	chr2R	21940439	21940467	I-element	5317	5345	10	28	'6-4	62.53	4.1	2.0	intron	Fili +	chr2R_10_21940001	chr2R_21940001	0.60	RAL-38
225	chr2R	22001282	22001402	blood	7013	378	37	120	'18-19	63.27	6.4	5.0	intron	CG34370 -	chr2R_37_22000001	chr2R_22000001	0.49	RAL-38
226	chr2R	22032281	22032394	roo	410	9	29	113	'12-17	65.40	4.1	5.7	intron	CG34370 -	chr2R_29_22030001	chr2R_22030001	0.41	RAL-38
227	chr2R	22751906	22751996	opus	473	6	7	90	'6-1	67.24	10.6	0.6	intron	CG42260 -	chr2R_7_22750001	chr2R_22750001	0.86	RAL-38
228	chr2R	22971881	22971969	jockey	4983	4675	28	88	'14-14	65.75	10.4	2.5	intergenic	not near genes	chr2R_28_22970001	chr2R_22970001	0.50	RAL-38
229	chr2R	22989945	22989990	diver	222	177	13	45	'7-6	62.48	3.1	3.2	intron	twi +	chr2R_13_22985001	chr2R_22985001	0.54	RAL-38
230	chr2R	23111556	23111645	hobo	2916	6	14	89	'2-12	59.26	5.9	2.0	intergenic	CR44781 -	chr2R_14_23110001	chr2R_23110001	0.14	RAL-38
231	chr2R	23281140	23281207	I-element	17	5323	17	67	'8-9	63.03	3.0	4.2	intergenic	not near genes	chr2R_17_23280001	chr2R_23280001	0.47	RAL-38
232	chr2R	23330677	23330706	Bari1	1657	1686	4	29	'3-1	71.78	24.8	0.2	intergenic	not near genes	chr2R_4_23330001	chr2R_23330001	0.75	RAL-38
233	chr2R	23743943	23743989	Bari1	1	49	5	46	'2-3	72.60	17.1	0.3	intron	egl -	chr2R_5_23740001	chr2R_23740001	0.40	RAL-38
234	chr2R	23992378	23992480	Bari1	1692	6	4	102	'2-2	67.72	8.7	0.4	3` UTR	CG3860 -	chr2R_4_23990001	chr2R_23990001	0.50	RAL-38
235	chr2R	24021545	24021666	pogo	2	2100	22	121	'11-11	66.99	7.5	2.6	intron	CG3907 -	chr2R_22_24020001	chr2R_24020001	0.50	RAL-38
236	chr2R	24504578	24504687	roo	409	12	41	109	'20-21	69.29	6.6	5.4	intergenic	not near genes	chr2R_41_24500001	chr2R_24500001	0.49	RAL-38
237	chr2R	25136595	25136692	Doc	4517	4	31	97	'2-29	63.97	9.2	3.0	intron	lov -	chr2R_31_25135001	chr2R_25135001	0.06	RAL-38
238	chr2R	25203760	25203794	1360	3373	3339	10	34	'7-3	60.88	5.3	1.6	intron	CG9380 -	chr2R_10_25200001	chr2R_25200001	0.70	RAL-38
239	chr3L	27589	27629	INE-1	573	536	7	40	'3-4	59.18	9.0	0.7	intergenic	not near genes	chr3L_7_25001	chr3L_25001	0.43	RAL-38
240	chr3L	46867	47012	FB	13	4	28	145	'7-21	66.07	5.2	4.5	intergenic	not near genes	chr3L_28_45001	chr3L_45001	0.25	RAL-38
241	chr3L	84379	84490	opus	7114	7488	24	111	'10-14	65.46	10.1	2.2	intergenic	not near genes	chr3L_24_80001	chr3L_80001	0.42	RAL-38
242	chr3L	119512	119625	297	6580	6972	12	113	'5-7	72.37	4.9	2.0	intergenic	not near genes	chr3L_12_115001	chr3L_115001	0.42	RAL-38
243	chr3L	128468	128567	P-element	2884	2880	19	99	'9-10	44.58	5.6	2.9	intergenic	not near genes	chr3L_19_125001	chr3L_125001	0.47	RAL-38
244	chr3L	489486	489553	Bari1	1665	15	8	67	'1-7	62.67	12.2	0.6	intron	klar -	chr3L_8_485001	chr3L_485001	0.12	RAL-38
245	chr3L	544743	544831	FB	17	15	19	88	'8-11	62.70	4.1	3.7	intergenic	not near genes	chr3L_19_540001	chr3L_540001	0.42	RAL-38
246	chr3L	579757	579835	Bari1	1684	24	7	78	'4-3	64.51	10.7	0.6	3` UTR	hipk +	chr3L_7_575001	chr3L_575001	0.57	RAL-38
247	chr3L	938448	938548	hobo	2923	2	24	100	'3-21	62.64	11.1	2.0	intron	Glut1 +	chr3L_24_935001	chr3L_935001	0.12	RAL-38
248	chr3L	1047151	1047262	diver	5887	214	48	111	'32-16	67.37	7.1	5.9	intron	bab1 -	chr3L_48_1045001	chr3L_1045001	0.67	RAL-38
249	chr3L	1258097	1258129	297	363	395	10	32	'7-3	57.70	2.4	2.9	intron	CG9134 +	chr3L_10_1255001	chr3L_1255001	0.70	RAL-38
250	chr3L	1839608	1839719	jockey	4663	4988	31	111	'10-21	63.16	7.2	3.8	intergenic	not near genes	chr3L_31_1835001	chr3L_1835001	0.32	RAL-38
251	chr3L	1985960	1986077	opus	7114	491	29	117	'15-14	68.47	7.2	3.5	intergenic	not near genes	chr3L_29_1985001	chr3L_1985001	0.52	RAL-38
252	chr3L	2285100	2285138	jockey	60	21	7	38	'2-5	63.56	10.0	0.6	intron	MsR2 +	chr3L_7_2285001	chr3L_2285001	0.29	RAL-38
253	chr3L	2340400	2340484	I-element	7	5340	24	84	'16-8	66.20	9.9	2.2	intron	MsR1 +	chr3L_24_2340001	chr3L_2340001	0.67	RAL-38
254	chr3L	2365063	2365171	Stalker2	7647	6	26	108	'17-9	68.71	4.1	5.1	intergenic	not near genes	chr3L_26_2365001	chr3L_2365001	0.65	RAL-38
255	chr3L	2485933	2485959	jockey	4689	4679	5	26	'4-1	60.56	7.8	0.6	intron	CG45186 +	chr3L_5_2485001	chr3L_2485001	0.80	RAL-38
256	chr3L	2609007	2609111	Transpac	4931	304	31	104	'14-17	63.57	6.7	4.0	intron	Pxn -	chr3L_31_2605001	chr3L_2605001	0.45	RAL-38
257	chr3L	2857053	2857171	roo	8664	9071	27	118	'13-14	68.80	6.7	3.5	intron	CG43444 -	chr3L_27_2855001	chr3L_2855001	0.48	RAL-38
258	chr3L	3778673	3778777	FB	8	9	13	104	'6-7	53.91	1.6	5.0	intron	CG32264 -	chr3L_13_3775001	chr3L_3775001	0.46	RAL-38
259	chr3L	4027011	4027125	blood	7384	7013	23	114	'6-17	66.18	6.9	2.9	intron	Gr64a +	chr3L_23_4025001	chr3L_4025001	0.26	RAL-38
260	chr3L	4596488	4596533	jockey	4711	4671	15	45	'10-5	63.52	8.9	1.5	intron	Src64B -	chr3L_15_4595001	chr3L_4595001	0.67	RAL-38
261	chr3L	4755570	4755677	P-element	2882	6	27	107	'16-11	42.14	5.7	4.0	intron	RhoGEF64C +	chr3L_27_4755001	chr3L_4755001	0.59	RAL-38
262	chr3L	4799139	4799259	Tabor	487	3	39	120	'27-12	66.12	10.1	3.5	intergenic	not near genes	chr3L_39_4795001	chr3L_4795001	0.69	RAL-38
263	chr3L	4928002	4928097	hobo	2931	2	25	95	'9-16	65.24	6.9	3.2	intergenic	not near genes	chr3L_25_4925001	chr3L_4925001	0.36	RAL-38
264	chr3L	5077004	5077054	F-element	133	108	25	50	'16-9	66.00	6.8	3.2	intron	Con -	chr3L_25_5075001	chr3L_5075001	0.64	RAL-38
265	chr3L	5140378	5140429	jockey	4758	4809	22	51	'10-12	64.13	10.3	1.9	exon	CHMP2B +	chr3L_22_5140001	chr3L_5140001	0.45	RAL-38
266	chr3L	5205281	5205403	flea	255	4756	37	122	'20-17	68.12	9.4	3.6	intron	shep -	chr3L_37_5205001	chr3L_5205001	0.54	RAL-38
267	chr3L	5711417	5711443	HMS-Beagle2	491	491	4	26	'3-1	48.11	3.5	0.9	intron	sif +	chr3L_4_5710001	chr3L_5710001	0.75	RAL-38
268	chr3L	5832149	5832234	mdg1	392	6	4	85	'2-2	68.10	8.3	0.4	intron	vn -	chr3L_4_5830001	chr3L_5830001	0.50	RAL-38
269	chr3L	6138788	6139031	412	7472	5	23	243	'1-22	65.86	9.1	2.3	intergenic	Cpr65Av -	chr3L_23_6135001	chr3L_6135001	0.04	RAL-38
270	chr3L	6862605	6862712	jockey	4971	9	25	107	'10-15	65.51	6.9	3.2	intergenic	not near genes	chr3L_25_6860001	chr3L_6860001	0.40	RAL-38
271	chr3L	7206937	7207045	mdg3	5252	5485	21	108	'14-7	65.77	4.4	3.9	intergenic	not near genes	chr3L_21_7205001	chr3L_7205001	0.67	RAL-38
272	chr3L	7388844	7388896	Doc	151	16	18	52	'10-8	67.71	9.6	1.7	intergenic	not near genes	chr3L_18_7385001	chr3L_7385001	0.56	RAL-38
273	chr3L	7651010	7651120	S-element	5	1705	6	110	'3-3	64.28	4.3	1.1	intron	CG32373 +	chr3L_6_7650001	chr3L_7650001	0.50	RAL-38
274	chr3L	7772137	7772212	P-element	19	2876	10	75	'4-6	42.08	4.1	2.0	intron	Clk -	chr3L_10_7770001	chr3L_7770001	0.40	RAL-38
275	chr3L	8165984	8166133	roo	8664	407	35	149	'9-26	64.28	4.6	6.2	intergenic	CG13675 -	chr3L_35_8165001	chr3L_8165001	0.26	RAL-38
276	chr3L	8243011	8243059	gypsy6	7423	4	19	48	'9-10	65.20	9.1	1.9	intron	Dscam4 +	chr3L_19_8240001	chr3L_8240001	0.47	RAL-38
277	chr3L	8243074	8243116	Gypsy6A_LTR	385	387	16	42	'6-10	60.69	7.6	1.9	intron	Dscam4 +	chr3L_16_8240001	chr3L_8240001	0.38	RAL-38
278	chr3L	8431788	8431891	297	385	4	10	103	'9-1	62.52	5.1	1.6	3` UTR	Cbl +	chr3L_10_8430001	chr3L_8430001	0.90	RAL-38
279	chr3L	9470090	9470120	jockey	4975	4942	16	30	'7-9	65.24	10.0	1.5	intron	CG44838 +	chr3L_16_9470001	chr3L_9470001	0.44	RAL-38
280	chr3L	10067702	10067740	Burdock	6351	240	12	38	'4-8	64.13	4.4	2.2	intron	dpr6 +	chr3L_12_10065001	chr3L_10065001	0.33	RAL-38
281	chr3L	10140139	10140261	Burdock	6135	254	36	122	'13-23	68.68	6.9	4.6	intergenic	not near genes	chr3L_36_10140001	chr3L_10140001	0.36	RAL-38
282	chr3L	10169083	10169197	Tabor	6847	486	35	114	'8-27	65.47	3.7	7.4	intron	dpr10 -	chr3L_35_10165001	chr3L_10165001	0.23	RAL-38
283	chr3L	10418858	10418963	roo	9055	8664	25	105	'9-16	68.03	5.0	4.2	intergenic	not near genes	chr3L_25_10415001	chr3L_10415001	0.36	RAL-38
284	chr3L	10521812	10521909	S-element	1703	1698	21	97	'16-5	65.01	3.2	5.0	intron	A2bp1 +	chr3L_21_10520001	chr3L_10520001	0.76	RAL-38
285	chr3L	10711095	10711211	opus	112	7492	9	116	'7-2	69.48	4.8	1.6	intergenic	not near genes	chr3L_9_10710001	chr3L_10710001	0.78	RAL-38
286	chr3L	10946796	10946909	3S18	6098	5765	20	113	'7-13	59.19	7.5	2.4	intergenic	not near genes	chr3L_20_10945001	chr3L_10945001	0.35	RAL-38
287	chr3L	11427950	11427996	Doc	19	5	15	46	'10-5	60.62	9.6	1.4	intergenic	not near genes	chr3L_15_11425001	chr3L_11425001	0.67	RAL-38
288	chr3L	11887252	11887370	Bari1	125	3	39	118	'20-19	67.47	7.5	4.6	intron	CG44837 -	chr3L_39_11885001	chr3L_11885001	0.51	RAL-38
289	chr3L	12304373	12304459	roo	1	9042	19	86	'18-1	67.10	5.8	2.8	intergenic	not near genes	chr3L_19_12300001	chr3L_12300001	0.95	RAL-38
290	chr3L	12534261	12534401	1360	3050	3047	4	140	'2-2	64.44	5.2	0.6	3` UTR	CG34242 +	chr3L_4_12530001	chr3L_12530001	0.50	RAL-38
291	chr3L	12926054	12926082	Bari1	1662	42	4	28	'3-1	76.48	5.6	0.6	intergenic	not near genes	chr3L_4_12925001	chr3L_12925001	0.75	RAL-38
292	chr3L	12952100	12952134	Juan	4174	4208	4	34	'2-2	59.21	0.3	3.1	intergenic	not near genes	chr3L_4_12950001	chr3L_12950001	0.50	RAL-38
293	chr3L	12989929	12989956	F-element	9	36	8	27	'4-4	55.11	14.4	0.5	intergenic	not near genes	chr3L_8_12985001	chr3L_12985001	0.50	RAL-38
294	chr3L	13227702	13227807	P-element	2884	2877	22	105	'11-11	50.56	5.9	3.2	intergenic	not near genes	chr3L_22_13225001	chr3L_13225001	0.50	RAL-38
295	chr3L	13363132	13363239	copia	246	4	26	107	'10-16	66.25	7.6	3.0	intergenic	not near genes	chr3L_26_13360001	chr3L_13360001	0.38	RAL-38
296	chr3L	13887900	13887939	jockey	20	21	6	39	'4-2	65.49	12.3	0.5	intron	dysc -	chr3L_6_13885001	chr3L_13885001	0.67	RAL-38
297	chr3L	14546718	14546828	Bari1	1702	17	7	110	'5-2	64.04	10.9	0.6	intron	CG9238 -	chr3L_7_14545001	chr3L_14545001	0.71	RAL-38
298	chr3L	14689766	14689996	copia	6	230	32	230	'31-1	69.73	8.3	3.4	intron	ome +	chr3L_32_14685001	chr3L_14685001	0.97	RAL-38
299	chr3L	14733283	14733551	Bari1	2	1662	8	268	'7-1	67.00	8.2	0.9	intron,exon	ome +,CG13471 -	chr3L_8_14730001	chr3L_14730001	0.88	RAL-38
300	chr3L	14811398	14811520	copia	256	4867	32	122	'12-20	61.76	6.8	4.1	intron	CG17839 +	chr3L_32_14810001	chr3L_14810001	0.38	RAL-38
301	chr3L	14822837	14822926	mdg1	7440	7051	15	89	'8-7	64.85	7.3	1.8	intron	CG17839 +	chr3L_15_14820001	chr3L_14820001	0.53	RAL-38
302	chr3L	15099557	15099642	G4	3816	3803	17	85	'9-8	52.49	6.5	2.3	intron	CTPsyn +	chr3L_17_15095001	chr3L_15095001	0.53	RAL-38
303	chr3L	15146412	15146524	Tabor	6846	483	40	112	'15-25	64.81	12.1	3.1	intergenic	Pex3 +	chr3L_40_15145001	chr3L_15145001	0.38	RAL-38
304	chr3L	15474211	15474251	I-element	5345	5305	13	40	'3-10	65.43	9.7	1.2	intergenic	CG7804 -	chr3L_13_15470001	chr3L_15470001	0.23	RAL-38
305	chr3L	15999202	15999303	297	9	6963	8	101	'4-4	63.51	2.8	2.1	exon	CG5830 -	chr3L_8_15995001	chr3L_15995001	0.50	RAL-38
306	chr3L	16332797	16332915	Tabor	484	2	32	118	'20-12	66.44	8.5	3.4	intergenic	retinin +	chr3L_32_16330001	chr3L_16330001	0.62	RAL-38
307	chr3L	16806589	16806689	P-element	14	2883	23	100	'13-10	45.07	7.7	2.6	intron,intron	CG9674 -,nudC +	chr3L_23_16805001	chr3L_16805001	0.57	RAL-38
308	chr3L	16865074	16865175	opus	497	20	32	101	'20-12	65.25	11.5	2.6	intergenic	CG9951 +,Lmpt +	chr3L_32_16865001	chr3L_16865001	0.62	RAL-38
309	chr3L	17122562	17122669	Tabor	2	474	22	107	'21-1	63.27	6.7	2.9	intron	Rbp6 -	chr3L_22_17120001	chr3L_17120001	0.95	RAL-38
310	chr3L	17181404	17181446	jockey	4720	4691	24	42	'13-11	62.04	7.9	2.7	intron	Rbp6 -	chr3L_24_17180001	chr3L_17180001	0.54	RAL-38
311	chr3L	17200040	17200089	Doc	8	43	27	49	'10-17	65.34	9.5	2.6	intron	Rbp6 -	chr3L_27_17200001	chr3L_17200001	0.37	RAL-38
312	chr3L	17750916	17751031	Stalker2	396	7247	34	115	'11-23	62.62	8.3	3.7	intergenic	Adgf-B -	chr3L_34_17750001	chr3L_17750001	0.32	RAL-38
313	chr3L	18310011	18310050	Doc	18	3	18	39	'7-11	63.28	4.3	3.4	intergenic	not near genes	chr3L_18_18310001	chr3L_18310001	0.39	RAL-38
314	chr3L	18351729	18351840	Max-element	6	297	32	111	'18-14	66.56	8.2	3.5	intergenic	not near genes	chr3L_32_18350001	chr3L_18350001	0.56	RAL-38
315	chr3L	18452931	18453047	hopper	1411	1414	30	116	'14-16	64.86	5.2	4.8	intergenic	not near genes	chr3L_30_18450001	chr3L_18450001	0.47	RAL-38
316	chr3L	18582932	18582978	X-element	13	59	25	46	'14-11	59.34	10.7	2.1	intergenic	not near genes	chr3L_25_18580001	chr3L_18580001	0.56	RAL-38
317	chr3L	18583091	18583182	mdg1	404	7050	22	91	'10-12	63.60	5.2	3.5	intergenic	CR45435 +	chr3L_22_18580001	chr3L_18580001	0.45	RAL-38
318	chr3L	18596334	18596567	Tabor	487	72	32	233	'30-2	65.50	7.9	3.6	5` UTR	CR45389 +	chr3L_32_18595001	chr3L_18595001	0.94	RAL-38
319	chr3L	18648252	18648342	flea	24	255	34	90	'7-27	70.71	6.1	4.8	intron	MYPT-75D +	chr3L_34_18645001	chr3L_18645001	0.21	RAL-38
320	chr3L	18737975	18738109	opus	497	7113	18	134	'7-11	67.80	7.4	2.1	intergenic	not near genes	chr3L_18_18735001	chr3L_18735001	0.39	RAL-38
321	chr3L	18760463	18760603	gypsy2	406	407	7	140	'2-5	77.80	6.5	0.9	intron	ftz-f1 -	chr3L_7_18760001	chr3L_18760001	0.29	RAL-38
322	chr3L	18848215	18848335	pogo	2100	3	9	120	'3-6	67.60	6.1	1.3	intergenic	not near genes	chr3L_9_18845001	chr3L_18845001	0.33	RAL-38
323	chr3L	18969116	18969226	hobo	2938	7	27	110	'12-15	64.62	8.4	2.9	intergenic	not near genes	chr3L_27_18965001	chr3L_18965001	0.44	RAL-38
324	chr3L	19261233	19261261	opus	482	7464	7	28	'2-5	74.73	12.3	0.5	intergenic	Bet1 +,CR45210 +	chr3L_7_19260001	chr3L_19260001	0.29	RAL-38
325	chr3L	19261319	19261345	297	6606	6580	5	26	'3-2	68.21	7.8	0.6	intergenic	Bet1 +,CR45210 +	chr3L_5_19260001	chr3L_19260001	0.60	RAL-38
326	chr3L	19339397	19339446	Tc1	53	3	9	49	'2-7	67.41	9.2	0.9	intergenic	not near genes	chr3L_9_19335001	chr3L_19335001	0.22	RAL-38
327	chr3L	19410062	19410157	jockey	19	4989	22	95	'5-17	62.08	10.8	1.9	intron	CG32206 -	chr3L_22_19410001	chr3L_19410001	0.23	RAL-38
328	chr3L	19899618	19899723	P-element	9	2883	28	105	'14-14	45.81	5.2	4.5	intron,intron	Mi-2 -,Su(Tpl) -	chr3L_28_19895001	chr3L_19895001	0.50	RAL-38
329	chr3L	19951176	19951286	Ivk	1	5377	44	110	'16-28	62.33	9.1	4.4	intron	Ac76E +	chr3L_44_19950001	chr3L_19950001	0.36	RAL-38
330	chr3L	20030165	20030230	hobo	2917	26	5	65	'1-4	63.87	6.0	0.7	intergenic	not near genes	chr3L_5_20030001	chr3L_20030001	0.20	RAL-38
331	chr3L	20072735	20072769	X-element	4617	4573	21	34	'13-8	60.28	7.3	2.5	intron	sNPF-R -	chr3L_21_20070001	chr3L_20070001	0.62	RAL-38
332	chr3L	20187372	20187423	FB	476	711	19	51	'10-9	64.97	23.1	0.8	intron	CG42674 -	chr3L_19_20185001	chr3L_20185001	0.53	RAL-38
333	chr3L	20868439	20868539	roo	8682	406	18	100	'4-14	63.10	6.3	2.5	intron	CG32432 -	chr3L_18_20865001	chr3L_20865001	0.22	RAL-38
334	chr3L	21096917	21096966	blood	7059	7010	17	49	'9-8	66.11	6.9	2.2	intron	ko -	chr3L_17_21095001	chr3L_21095001	0.53	RAL-38
335	chr3L	21102753	21102814	roo	19	403	6	61	'5-1	65.77	12.0	0.5	intron	ko -	chr3L_6_21100001	chr3L_21100001	0.83	RAL-38
336	chr3L	21235172	21235285	Stalker2	405	6	25	113	'15-10	66.60	10.9	2.1	intron	Eip78C +	chr3L_25_21235001	chr3L_21235001	0.60	RAL-38
337	chr3L	21381837	21381868	jockey	4774	4805	9	31	'3-6	62.59	13.0	0.6	intergenic	not near genes	chr3L_9_21380001	chr3L_21380001	0.33	RAL-38
338	chr3L	21383650	21383752	FB	5	10	10	102	'4-6	66.67	11.1	0.8	intron	rgn +	chr3L_10_21380001	chr3L_21380001	0.40	RAL-38
339	chr3L	21406788	21406925	Max-element	291	8234	22	137	'7-15	64.35	8.9	2.2	intron	rgn +	chr3L_22_21405001	chr3L_21405001	0.32	RAL-38
340	chr3L	21428656	21428683	flea	4758	29	5	27	'2-3	68.50	17.9	0.3	intron,intron	barc -,CG33288 +	chr3L_5_21425001	chr3L_21425001	0.40	RAL-38
341	chr3L	21772577	21772656	mdg3	236	31	10	79	'2-8	63.58	5.6	1.5	intron	CG42689 +	chr3L_10_21770001	chr3L_21770001	0.20	RAL-38
342	chr3L	21859605	21859799	blood	7388	7158	12	194	'8-4	66.22	8.7	1.2	intron	mub +	chr3L_12_21855001	chr3L_21855001	0.67	RAL-38
343	chr3L	21955210	21955325	flea	249	4754	29	115	'17-12	67.17	9.2	2.8	5` UTR	CG7458 +	chr3L_29_21955001	chr3L_21955001	0.59	RAL-38
344	chr3L	21994687	21994798	roo	405	8670	16	111	'4-12	69.24	9.2	1.6	intergenic	not near genes	chr3L_16_21990001	chr3L_21990001	0.25	RAL-38
345	chr3L	22046631	22046884	mdg1	7458	39	21	253	'20-1	67.92	7.8	2.4	intron	Oct-TyrR +	chr3L_21_22045001	chr3L_22045001	0.95	RAL-38
346	chr3L	22108068	22108178	Transpac	310	4926	13	110	'7-6	66.45	9.9	1.2	intergenic	not near genes	chr3L_13_22105001	chr3L_22105001	0.54	RAL-38
347	chr3L	22236218	22236347	hopper	1350	1389	8	129	'1-7	70.08	7.6	0.9	intron	olf413 +	chr3L_8_22235001	chr3L_22235001	0.12	RAL-38
348	chr3L	22288187	22288288	1360	2	16	12	101	'9-3	69.59	12.0	0.9	5` UTR	Hem -	chr3L_12_22285001	chr3L_22285001	0.75	RAL-38
349	chr3L	22635675	22635781	hopper	12	1412	5	106	'4-1	63.58	6.0	0.7	intron	CG14459 -	chr3L_5_22635001	chr3L_22635001	0.80	RAL-38
350	chr3L	22744665	22744716	FB	86	19	11	51	'4-7	71.06	3.3	2.6	intron	CG7369 +	chr3L_11_22740001	chr3L_22740001	0.36	RAL-38
351	chr3L	22854796	22854899	roo	407	16	8	103	'6-2	70.01	11.8	0.6	3` UTR	CG32459 -	chr3L_8_22850001	chr3L_22850001	0.75	RAL-38
352	chr3L	23064286	23064373	roo	392	17	7	87	'1-6	68.10	6.6	0.9	intergenic	not near genes	chr3L_7_23060001	chr3L_23060001	0.14	RAL-38
353	chr3L	23146471	23146508	1360	3379	43	9	37	'5-4	64.92	5.7	1.3	intergenic	not near genes	chr3L_9_23145001	chr3L_23145001	0.56	RAL-38
354	chr3L	23244173	23244269	Tabor	14	474	12	96	'3-9	58.39	10.4	1.1	intron	nAChRalpha4 +	chr3L_12_23240001	chr3L_23240001	0.25	RAL-38
355	chr3L	23444981	23445021	flea	4757	4797	10	40	'8-2	67.24	16.6	0.6	intergenic	not near genes	chr3L_10_23440001	chr3L_23440001	0.80	RAL-38
356	chr3L	23580734	23580872	Stalker2	7626	7250	9	138	'2-7	61.48	3.7	1.9	intron	AGO3 +	chr3L_9_23580001	chr3L_23580001	0.22	RAL-38
357	chr3L	23846438	23846527	Max-element	8	8512	16	89	'8-8	60.71	6.8	2.1	intron	CG40470 -	chr3L_16_23845001	chr3L_23845001	0.50	RAL-38
358	chr3L	24034698	24034728	1360	271	246	4	30	'1-3	72.37	8.6	0.4	intron	CG40045 +	chr3L_4_24030001	chr3L_24030001	0.25	RAL-38
359	chr3L	24123562	24123669	gypsy	449	2	28	107	'11-17	65.10	14.8	1.8	intron	Snap25 +	chr3L_28_24120001	chr3L_24120001	0.39	RAL-38
360	chr3L	24213342	24213370	X-element	4699	4672	5	28	'4-1	57.25	9.3	0.5	intron	Snap25 +	chr3L_5_24210001	chr3L_24210001	0.80	RAL-38
361	chr3L	24228596	24228637	opus	490	449	7	41	'4-3	68.98	11.0	0.6	intron	Snap25 +	chr3L_7_24225001	chr3L_24225001	0.57	RAL-38
362	chr3L	24240094	24240125	Idefix	7321	7342	7	31	'3-4	60.89	7.0	0.9	intron	Snap25 +	chr3L_7_24240001	chr3L_24240001	0.43	RAL-38
363	chr3L	24734421	24734478	roo	9024	15	7	57	'4-3	70.96	4.0	1.4	intron	scro +	chr3L_7_24730001	chr3L_24730001	0.57	RAL-38
364	chr3L	25006610	25006648	F-element	262	236	11	38	'6-5	57.83	14.3	0.7	intergenic	not near genes	chr3L_11_25005001	chr3L_25005001	0.55	RAL-38
365	chr3L	25200673	25200736	S-element	1672	1699	5	63	'2-3	66.14	7.3	0.6	intergenic	not near genes	chr3L_5_25200001	chr3L_25200001	0.40	RAL-38
366	chr3L	25272525	25272576	1360	9	81	8	51	'3-5	68.65	4.1	1.6	intron	CG40467 -	chr3L_8_25270001	chr3L_25270001	0.38	RAL-38
367	chr3L	25552454	25552489	Fw3	2	37	11	35	'2-9	66.86	7.5	1.3	intron	CG41343 -	chr3L_11_25550001	chr3L_25550001	0.18	RAL-38
368	chr3L	25877809	25877837	gypsy	7024	9	4	28	'3-1	63.66	7.8	0.5	intron	CG40178 -	chr3L_4_25875001	chr3L_25875001	0.75	RAL-38
369	chr3L	27134851	27134884	Doc	9	48	4	33	'2-2	60.80	13.2	0.3	intergenic	not near genes	chr3L_4_27130001	chr3L_27130001	0.50	RAL-38
370	chr3L	27415223	27415319	transib2	2805	6	7	96	'2-5	65.46	10.2	0.6	intron	Dbp80 +	chr3L_7_27415001	chr3L_27415001	0.29	RAL-38
371	chr3R	87163	87259	Burdock	15	244	7	96	'4-3	60.14	12.1	0.5	intergenic	not near genes	chr3R_7_85001	chr3R_85001	0.57	RAL-38
372	chr3R	378530	378623	copia	4879	238	7	93	'5-2	67.16	3.8	1.5	intergenic	not near genes	chr3R_7_375001	chr3R_375001	0.71	RAL-38
373	chr3R	903012	903125	gypsy	6985	451	6	113	'2-4	72.98	7.7	0.7	intron	CG42621 +	chr3R_6_900001	chr3R_900001	0.33	RAL-38
374	chr3R	1011778	1011897	Max-element	8235	8534	16	119	'8-8	66.88	4.3	3.0	intergenic	not near genes	chr3R_16_1010001	chr3R_1010001	0.50	RAL-38
375	chr3R	1048076	1048135	Transpac	5216	4941	4	59	'1-3	61.66	2.8	1.1	intron	CG15831 +	chr3R_4_1045001	chr3R_1045001	0.25	RAL-38
376	chr3R	1268704	1268756	Doc	89	37	5	52	'2-3	65.47	7.3	0.6	intergenic	not near genes	chr3R_5_1265001	chr3R_1265001	0.40	RAL-38
377	chr3R	1451076	1451107	F-element	4644	4675	5	31	'3-2	63.58	9.5	0.5	intron	CG40155 +	chr3R_5_1450001	chr3R_1450001	0.60	RAL-38
378	chr3R	1917709	1917822	Stalker2	404	9	5	113	'2-3	65.26	4.5	0.9	intron	CG42623 +	chr3R_5_1915001	chr3R_1915001	0.40	RAL-38
379	chr3R	2270659	2270686	gypsy5	412	406	5	27	'3-2	70.55	42.2	0.1	intergenic	not near genes	chr3R_5_2270001	chr3R_2270001	0.60	RAL-38
380	chr3R	2474283	2474335	Juan	4204	4015	5	52	'3-2	60.57	7.3	0.6	intergenic	not near genes	chr3R_5_2470001	chr3R_2470001	0.60	RAL-38
381	chr3R	2999746	2999850	McClintock	6422	9	4	104	'2-2	67.37	4.3	0.8	intron	CG42618 -	chr3R_4_2995001	chr3R_2995001	0.50	RAL-38
382	chr3R	3076832	3076875	Quasimodo	44	1	4	43	'1-3	68.68	13.2	0.3	intergenic	not near genes	chr3R_4_3075001	chr3R_3075001	0.25	RAL-38
383	chr3R	3737974	3738106	mdg3	5205	5483	15	132	'8-7	63.97	3.6	3.3	intron	Tim17b +	chr3R_15_3735001	chr3R_3735001	0.53	RAL-38
384	chr3R	3748714	3748747	1360	3346	3359	5	33	'3-2	81.62	8.5	0.5	intergenic	not near genes	chr3R_5_3745001	chr3R_3745001	0.60	RAL-38
385	chr3R	4190892	4190994	pogo	8	2087	10	102	'5-5	64.59	9.1	1.0	intergenic	not near genes	chr3R_10_4190001	chr3R_4190001	0.50	RAL-38
386	chr3R	4243561	4243674	opus	7500	3	14	113	'6-8	67.24	12.4	1.0	intergenic	CG34305 -	chr3R_14_4240001	chr3R_4240001	0.43	RAL-38
387	chr3R	4549215	4549330	1731	309	4311	7	115	'4-3	65.77	7.3	0.8	intron	CG34357 -	chr3R_7_4545001	chr3R_4545001	0.57	RAL-38
388	chr3R	4553292	4553405	Juan	4180	1	5	113	'4-1	66.34	3.5	1.1	intron	CG34357 -	chr3R_5_4550001	chr3R_4550001	0.80	RAL-38
389	chr3R	4559515	4559582	Bari1	10	1671	10	67	'5-5	65.94	3.8	2.1	intergenic	not near genes	chr3R_10_4555001	chr3R_4555001	0.50	RAL-38
390	chr3R	4679890	4680004	Max-element	294	8235	14	114	'7-7	63.97	8.2	1.5	intron	CG43427 +	chr3R_14_4675001	chr3R_4675001	0.50	RAL-38
391	chr3R	4680072	4680176	opus	3	7486	11	104	'7-4	66.29	9.0	1.1	intron	CG43427 +	chr3R_11_4680001	chr3R_4680001	0.64	RAL-38
392	chr3R	4739754	4739829	P-element	2882	9	8	75	'3-5	39.99	9.7	0.7	intron	tacc -	chr3R_8_4735001	chr3R_4735001	0.38	RAL-38
393	chr3R	4803508	4803569	P-element	49	8	5	61	'2-3	45.32	11.8	0.4	intron	ctrip -	chr3R_5_4800001	chr3R_4800001	0.40	RAL-38
394	chr3R	4939937	4940013	Bari1	1692	24	10	76	'6-4	63.67	7.9	1.1	intron	Cdep +	chr3R_10_4935001	chr3R_4935001	0.60	RAL-38
395	chr3R	4974237	4974339	copia	244	7	8	102	'4-4	66.85	9.4	0.8	intergenic	not near genes	chr3R_8_4970001	chr3R_4970001	0.50	RAL-38
396	chr3R	4975705	4975801	roo	8670	9053	17	96	'11-6	73.25	10.1	1.5	intergenic	not near genes	chr3R_17_4975001	chr3R_4975001	0.65	RAL-38
397	chr3R	5197680	5197784	412	7069	7545	14	104	'6-8	64.87	9.9	1.3	intron	cno -	chr3R_14_5195001	chr3R_5195001	0.43	RAL-38
398	chr3R	5777354	5777470	297	391	6586	13	116	'9-4	68.90	9.7	1.2	intron	CG2082 -	chr3R_13_5775001	chr3R_5775001	0.69	RAL-38
399	chr3R	5925124	5925248	mdg1	7055	32	4	124	'1-3	74.40	7.6	0.5	intron	CG34113 -	chr3R_4_5925001	chr3R_5925001	0.25	RAL-38
400	chr3R	6090546	6090638	blood	7010	7374	10	92	'8-2	65.14	9.4	1.0	intron	Gasp -	chr3R_10_6090001	chr3R_6090001	0.80	RAL-38
401	chr3R	6195318	6195402	copia	238	4888	9	84	'6-3	68.07	10.3	0.8	3` UTR	NPFR +	chr3R_9_6195001	chr3R_6195001	0.67	RAL-38
402	chr3R	6197689	6197782	I-element	19	5349	11	93	'2-9	67.62	9.5	1.0	intergenic	not near genes	chr3R_11_6195001	chr3R_6195001	0.18	RAL-38
403	chr3R	6354476	6354593	S-element	1	1710	16	117	'9-7	68.04	11.9	1.2	intron	Pak +	chr3R_16_6350001	chr3R_6350001	0.56	RAL-38
404	chr3R	6355687	6355804	Stalker2	7248	405	9	117	'7-2	62.76	12.8	0.7	intron	Pak +	chr3R_9_6355001	chr3R_6355001	0.78	RAL-38
405	chr3R	6405028	6405131	297	6592	6967	6	103	'2-4	66.16	7.8	0.7	intron	Dmtn -	chr3R_6_6405001	chr3R_6405001	0.33	RAL-38
406	chr3R	6423212	6423313	S-element	1695	1715	9	101	'4-5	65.41	4.1	1.8	intron	gpp +	chr3R_9_6420001	chr3R_6420001	0.44	RAL-38
407	chr3R	6490031	6490073	Doc	6	52	10	42	'3-7	64.88	14.0	0.7	intron	CG15186 +	chr3R_10_6490001	chr3R_6490001	0.30	RAL-38
408	chr3R	6508765	6508883	1360	2	1	20	118	'9-11	65.76	6.9	2.5	intergenic	not near genes	chr3R_20_6505001	chr3R_6505001	0.45	RAL-38
409	chr3R	6552048	6552120	mdg1	39	411	4	72	'1-3	68.42	9.2	0.4	intron	dpr11 -	chr3R_4_6550001	chr3R_6550001	0.25	RAL-38
410	chr3R	6685954	6685996	Doc	393	429	11	42	'5-6	60.73	16.7	0.6	intergenic	not near genes	chr3R_11_6685001	chr3R_6685001	0.45	RAL-38
411	chr3R	6688055	6688177	roo	9043	8677	4	122	'2-2	63.94	15.6	0.2	intergenic	Ccp84Ag +	chr3R_4_6685001	chr3R_6685001	0.50	RAL-38
412	chr3R	6813675	6813745	copia	4871	254	8	70	'3-5	64.80	8.8	0.8	intron	CR42651 -	chr3R_8_6810001	chr3R_6810001	0.38	RAL-38
413	chr3R	6831690	6831765	roo	9025	8663	8	75	'3-5	67.20	16.9	0.4	intron	Scr -	chr3R_8_6830001	chr3R_6830001	0.38	RAL-38
414	chr3R	6853475	6853583	roo	7	403	9	108	'8-1	69.98	11.9	0.7	intergenic	not near genes	chr3R_9_6850001	chr3R_6850001	0.89	RAL-38
415	chr3R	6859493	6859529	F-element	301	342	8	36	'4-4	63.69	10.6	0.7	intergenic	not near genes	chr3R_8_6855001	chr3R_6855001	0.50	RAL-38
416	chr3R	7100974	7101086	pogo	2092	3	23	112	'7-16	65.58	12.8	1.7	intron	Alh -	chr3R_23_7100001	chr3R_7100001	0.30	RAL-38
417	chr3R	7165316	7165425	roo	8668	401	18	109	'15-3	71.32	9.8	1.7	intron	sas +	chr3R_18_7165001	chr3R_7165001	0.83	RAL-38
418	chr3R	7167006	7167112	Tabor	477	6846	30	106	'16-14	61.38	6.9	3.8	intron	sas +	chr3R_30_7165001	chr3R_7165001	0.53	RAL-38
419	chr3R	7279553	7279644	P-element	16	6	10	91	'4-6	49.87	8.2	1.1	intron	rn -	chr3R_10_7275001	chr3R_7275001	0.40	RAL-38
420	chr3R	7387476	7387507	F-element	41	10	5	31	'2-3	50.25	18.6	0.3	5` UTR	CR45560 +	chr3R_5_7385001	chr3R_7385001	0.40	RAL-38
421	chr3R	7483378	7483484	Stalker2	392	7252	23	106	'11-12	63.87	7.8	2.6	intergenic	not near genes	chr3R_23_7480001	chr3R_7480001	0.48	RAL-38
422	chr3R	7493851	7493961	flea	4759	5011	18	110	'8-10	64.61	9.3	1.7	intergenic	alpha-Est10 -,alpha-Est9 -	chr3R_18_7490001	chr3R_7490001	0.44	RAL-38
423	chr3R	7541459	7541525	Tc3	309	308	5	66	'1-4	46.53	9.8	0.5	intron	alpha-Est3 -	chr3R_5_7540001	chr3R_7540001	0.20	RAL-38
424	chr3R	7627864	7627904	I-element	5347	5307	4	40	'2-2	67.63	9.7	0.4	intron	CG34127 -	chr3R_4_7625001	chr3R_7625001	0.50	RAL-38
425	chr3R	7630321	7630419	opus	7496	19	17	98	'9-8	64.28	10.7	1.5	intron	CG34127 -	chr3R_17_7630001	chr3R_7630001	0.53	RAL-38
426	chr3R	7643587	7643627	412	7511	26	4	40	'2-2	63.90	6.6	0.5	intergenic	not near genes	chr3R_4_7640001	chr3R_7640001	0.50	RAL-38
427	chr3R	7649766	7649885	Quasimodo	7366	2	13	119	'4-9	63.52	7.9	1.5	intergenic	not near genes	chr3R_13_7645001	chr3R_7645001	0.31	RAL-38
428	chr3R	7670058	7670177	412	7544	3	10	119	'6-4	66.67	9.4	1.0	intron	Nlg1 +	chr3R_10_7670001	chr3R_7670001	0.60	RAL-38
429	chr3R	7874865	7874941	hobo	5	2921	17	76	'15-2	63.41	8.4	1.8	intron	CG17816 -	chr3R_17_7870001	chr3R_7870001	0.88	RAL-38
430	chr3R	7886163	7886277	hopper	1412	4	6	114	'1-5	68.06	6.4	0.8	5` UTR	CG17816 -	chr3R_6_7885001	chr3R_7885001	0.17	RAL-38
431	chr3R	7932227	7932304	X-element	13	4693	14	77	'7-7	62.13	13.7	1.0	intron	dsx -	chr3R_14_7930001	chr3R_7930001	0.50	RAL-38
432	chr3R	8214680	8214792	Stalker2	7253	399	27	112	'14-13	63.63	7.0	3.4	intergenic	not near genes	chr3R_27_8210001	chr3R_8210001	0.52	RAL-38
433	chr3R	8322503	8322611	blood	7387	7022	25	108	'12-13	63.55	8.1	2.7	intron,exon	Poxm -,Or85a +	chr3R_25_8320001	chr3R_8320001	0.48	RAL-38
434	chr3R	8329204	8329258	3S18	5802	311	9	54	'5-4	66.66	12.3	0.7	intron	Poxm -	chr3R_9_8325001	chr3R_8325001	0.56	RAL-38
435	chr3R	8423179	8423214	jockey	6	20	4	35	'2-2	65.36	10.5	0.3	intron	CG45263 -	chr3R_4_8420001	chr3R_8420001	0.50	RAL-38
436	chr3R	8450987	8451085	412	9	7535	21	98	'9-12	58.22	13.8	1.4	intron	CG45263 -	chr3R_21_8450001	chr3R_8450001	0.43	RAL-38
437	chr3R	8575288	8575374	roo	8689	399	9	86	'3-6	69.20	6.6	1.2	intergenic	not near genes	chr3R_9_8575001	chr3R_8575001	0.33	RAL-38
438	chr3R	8598363	8598471	Tabor	5	485	26	108	'17-9	65.25	9.4	2.5	intron	5-HT2B +	chr3R_26_8595001	chr3R_8595001	0.65	RAL-38
439	chr3R	8705244	8705282	jockey	4891	4929	8	38	'4-4	59.45	12.8	0.6	intergenic	not near genes	chr3R_8_8705001	chr3R_8705001	0.50	RAL-38
440	chr3R	8742344	8742375	opus	499	7471	9	31	'5-4	64.54	13.0	0.6	intron	CG9801 -	chr3R_9_8740001	chr3R_8740001	0.56	RAL-38
441	chr3R	8827535	8827647	297	388	6585	7	112	'3-4	68.27	10.8	0.6	3` UTR	pyd -	chr3R_7_8825001	chr3R_8825001	0.43	RAL-38
442	chr3R	8934820	8934932	297	6586	388	7	112	'1-6	70.68	10.6	0.6	3` UTR	CR44020 -	chr3R_7_8930001	chr3R_8930001	0.14	RAL-38
443	chr3R	8965712	8965823	3S18	333	2	10	111	'3-7	67.16	6.2	1.4	intergenic	not near genes	chr3R_10_8965001	chr3R_8965001	0.30	RAL-38
444	chr3R	9032549	9032667	pogo	2098	3	8	118	'1-7	69.74	8.6	0.8	intron	neur -	chr3R_8_9030001	chr3R_9030001	0.12	RAL-38
445	chr3R	9142693	9142726	roo	8674	8707	6	33	'4-2	65.70	9.8	0.6	intron	pum -	chr3R_6_9140001	chr3R_9140001	0.67	RAL-38
446	chr3R	9178974	9179063	Bari1	4	1675	7	89	'4-3	66.56	9.0	0.7	intron,3` UTR	pum -,CG11997 +	chr3R_7_9175001	chr3R_9175001	0.57	RAL-38
447	chr3R	9298941	9299051	412	12	494	24	110	'15-9	66.36	11.4	1.9	intron	CG8861 -	chr3R_24_9295001	chr3R_9295001	0.62	RAL-38
448	chr3R	9319570	9319608	BS	4999	5015	11	38	'7-4	57.98	12.5	0.8	intron	CG8861 -	chr3R_11_9315001	chr3R_9315001	0.64	RAL-38
449	chr3R	9379588	9379773	mdg1	7391	7041	14	185	'2-12	66.05	6.5	1.9	intron	FER -	chr3R_14_9375001	chr3R_9375001	0.14	RAL-38
450	chr3R	9456564	9456676	pogo	3	2092	7	112	'3-4	65.17	11.0	0.6	intergenic	GstZ1 -,GstZ2 -	chr3R_7_9455001	chr3R_9455001	0.43	RAL-38
451	chr3R	9571914	9572011	mdg1	400	2	18	97	'7-11	66.65	8.9	1.8	3` UTR	CG9399 -	chr3R_18_9570001	chr3R_9570001	0.39	RAL-38
452	chr3R	9816905	9816990	blood	7373	7025	9	85	'5-4	61.16	13.2	0.6	exon	CG16904 -	chr3R_9_9815001	chr3R_9815001	0.56	RAL-38
453	chr3R	10009097	10009271	roo	404	58	22	174	'14-8	63.52	7.8	2.5	intron	Mical -	chr3R_22_10005001	chr3R_10005001	0.64	RAL-38
454	chr3R	10030708	10030801	BS	5074	5004	42	93	'12-30	61.99	8.5	4.4	intron	Mical -	chr3R_42_10030001	chr3R_10030001	0.29	RAL-38
455	chr3R	10139237	10139325	Tirant	370	8114	9	88	'8-1	70.34	4.1	1.8	intron	tws -	chr3R_9_10135001	chr3R_10135001	0.89	RAL-38
456	chr3R	10145826	10145896	FB	23	24	11	70	'7-4	62.21	6.1	1.5	intron	Invadolysin +	chr3R_11_10145001	chr3R_10145001	0.64	RAL-38
457	chr3R	10148365	10148474	1360	3387	3381	16	109	'9-7	68.55	7.3	1.9	intron	Invadolysin +	chr3R_16_10145001	chr3R_10145001	0.56	RAL-38
458	chr3R	10310740	10310860	roo	8664	407	18	120	'14-4	65.72	11.7	1.4	intron	CG6293 -	chr3R_18_10310001	chr3R_10310001	0.78	RAL-38
459	chr3R	10401188	10401257	1360	3382	3373	10	69	'4-6	68.97	5.8	1.5	exon	mthl11 +	chr3R_10_10400001	chr3R_10400001	0.40	RAL-38
460	chr3R	10507808	10507922	Bari1	1697	1	6	114	'2-4	67.92	14.1	0.4	3` UTR	hth -	chr3R_6_10505001	chr3R_10505001	0.33	RAL-38
461	chr3R	10574356	10574474	opus	7114	494	8	118	'1-7	68.52	7.3	1.0	intron	hth -	chr3R_8_10570001	chr3R_10570001	0.12	RAL-38
462	chr3R	10741075	10741147	1360	3383	3354	9	72	'6-3	57.61	12.4	0.7	intron	TkR86C -	chr3R_9_10740001	chr3R_10740001	0.67	RAL-38
463	chr3R	10744116	10744177	X-element	4707	4710	4	61	'3-1	66.05	11.3	0.3	intron	TkR86C -	chr3R_4_10740001	chr3R_10740001	0.75	RAL-38
464	chr3R	10782053	10782151	1360	4	3367	9	98	'4-5	65.67	7.9	1.0	exon	CG42633 -	chr3R_9_10780001	chr3R_10780001	0.44	RAL-38
465	chr3R	10834263	10834365	hopper	18	1	11	102	'5-6	61.34	12.2	0.8	intron	Cad86C +	chr3R_11_10830001	chr3R_10830001	0.45	RAL-38
466	chr3R	10911465	10911562	412	18	487	9	97	'3-6	64.44	7.0	1.1	intergenic	not near genes	chr3R_9_10910001	chr3R_10910001	0.33	RAL-38
467	chr3R	10923837	10923898	hopper	1398	43	6	61	'5-1	64.23	7.7	0.7	intergenic	not near genes	chr3R_6_10920001	chr3R_10920001	0.83	RAL-38
468	chr3R	10930879	10930974	297	14	395	16	95	'10-6	63.31	7.4	1.9	intergenic	not near genes	chr3R_16_10930001	chr3R_10930001	0.62	RAL-38
469	chr3R	11010861	11010978	S-element	1712	3	7	117	'4-3	66.04	13.3	0.5	intron	CG34114 +	chr3R_7_11010001	chr3R_11010001	0.57	RAL-38
470	chr3R	11184364	11184446	Stalker4	396	6982	6	82	'5-1	63.34	4.9	1.0	intergenic	not near genes	chr3R_6_11180001	chr3R_11180001	0.83	RAL-38
471	chr3R	11470017	11470132	S-element	8	2	16	115	'6-10	67.37	7.7	1.8	intergenic	not near genes	chr3R_16_11470001	chr3R_11470001	0.38	RAL-38
472	chr3R	11827402	11827514	S-element	1712	8	6	112	'5-1	69.65	9.3	0.6	intron	CG6959 -	chr3R_6_11825001	chr3R_11825001	0.83	RAL-38
473	chr3R	11925132	11925219	pogo	22	2087	11	87	'1-10	60.52	11.6	0.9	intron	Cad87A -	chr3R_11_11925001	chr3R_11925001	0.09	RAL-38
474	chr3R	12043686	12043723	jockey	4573	4561	9	37	'3-6	59.30	12.0	0.7	intergenic	CG14736 +	chr3R_9_12040001	chr3R_12040001	0.33	RAL-38
475	chr3R	12188764	12188851	I-element	5345	18	21	87	'7-14	61.35	6.6	2.8	intergenic	not near genes	chr3R_21_12185001	chr3R_12185001	0.33	RAL-38
476	chr3R	12341735	12341842	mdg1	12	419	7	107	'3-4	64.22	6.6	0.9	exon	CG44956 +	chr3R_7_12340001	chr3R_12340001	0.43	RAL-38
477	chr3R	12363805	12363854	jockey	58	8	12	49	'5-7	65.43	11.6	1.0	3` UTR	Tim17a1 -	chr3R_12_12360001	chr3R_12360001	0.42	RAL-38
478	chr3R	12440225	12440341	297	6974	5	21	116	'12-9	68.38	8.9	2.1	intron	Desat1 +	chr3R_21_12440001	chr3R_12440001	0.57	RAL-38
479	chr3R	12614750	12614838	1731	293	5	11	88	'5-6	65.33	10.3	1.0	intergenic	not near genes	chr3R_11_12610001	chr3R_12610001	0.45	RAL-38
480	chr3R	12890046	12890119	HMS-Beagle2	298	6917	8	73	'2-6	65.47	5.5	1.2	intergenic	not near genes	chr3R_8_12890001	chr3R_12890001	0.25	RAL-38
481	chr3R	12938030	12938151	Tc3	316	237	4	121	'3-1	76.24	11.9	0.3	intergenic	not near genes	chr3R_4_12935001	chr3R_12935001	0.75	RAL-38
482	chr3R	12938039	12938148	1360	4	3383	12	109	'2-10	67.64	12.2	0.9	intergenic	not near genes	chr3R_12_12935001	chr3R_12935001	0.17	RAL-38
483	chr3R	12952868	12952971	HMS-Beagle2	7178	6885	14	103	'7-7	69.61	8.1	1.5	intron	grsm -	chr3R_14_12950001	chr3R_12950001	0.50	RAL-38
484	chr3R	13162776	13162838	hobo	2911	12	7	62	'4-3	64.19	9.2	0.7	exon	timeout +	chr3R_7_13160001	chr3R_13160001	0.57	RAL-38
485	chr3R	13357065	13357090	hopper	20	45	5	25	'2-3	62.63	12.7	0.4	intergenic	not near genes	chr3R_5_13355001	chr3R_13355001	0.40	RAL-38
486	chr3R	13543513	13543605	mdg1	7	400	7	92	'4-3	66.01	5.8	1.0	intergenic	CG31337 -	chr3R_7_13540001	chr3R_13540001	0.57	RAL-38
487	chr3R	13615136	13615221	jockey	4967	6	16	85	'10-6	61.73	8.6	1.7	intergenic	not near genes	chr3R_16_13615001	chr3R_13615001	0.62	RAL-38
488	chr3R	13627479	13627533	F-element	27	8	17	54	'7-10	64.42	10.1	1.5	intergenic	not near genes	chr3R_17_13625001	chr3R_13625001	0.41	RAL-38
489	chr3R	13764468	13764504	opus	7114	7028	4	36	'3-1	74.70	13.2	0.3	3` UTR	CG34383 +	chr3R_4_13760001	chr3R_13760001	0.75	RAL-38
490	chr3R	13882047	13882129	1360	29	8	11	82	'4-7	67.22	7.4	1.3	intergenic	not near genes	chr3R_11_13880001	chr3R_13880001	0.36	RAL-38
491	chr3R	13896597	13896761	roo	304	8667	22	164	'4-18	70.86	4.7	3.9	intergenic	not near genes	chr3R_22_13895001	chr3R_13895001	0.18	RAL-38
492	chr3R	14049326	14049439	transib2	5	2821	8	113	'5-3	69.95	5.6	1.2	intergenic	not near genes	chr3R_8_14045001	chr3R_14045001	0.62	RAL-38
493	chr3R	14229844	14229897	jockey	8	35	11	53	'5-6	68.74	11.8	0.9	intergenic	not near genes	chr3R_11_14225001	chr3R_14225001	0.45	RAL-38
494	chr3R	14244457	14244555	mdg1	408	7048	11	98	'9-2	66.95	3.8	2.3	intron	CG43291 -	chr3R_11_14240001	chr3R_14240001	0.82	RAL-38
495	chr3R	14281490	14281568	FB	26	12	5	78	'2-3	62.25	8.3	0.5	intron	trx -	chr3R_5_14280001	chr3R_14280001	0.40	RAL-38
496	chr3R	14340201	14340278	FB	17	22	13	77	'5-8	65.48	9.5	1.2	intron	NK7.1 -	chr3R_13_14340001	chr3R_14340001	0.38	RAL-38
497	chr3R	14688247	14688333	pogo	2072	10	11	86	'1-10	62.58	7.0	1.4	intron	Meltrin -	chr3R_11_14685001	chr3R_14685001	0.09	RAL-38
498	chr3R	14715150	14715238	HMS-Beagle	7031	6806	19	88	'8-11	62.16	11.0	1.6	intron	kibra -	chr3R_19_14715001	chr3R_14715001	0.42	RAL-38
499	chr3R	14743172	14743206	FB	19	15	7	34	'1-6	55.59	7.7	0.8	intron	jvl +	chr3R_7_14740001	chr3R_14740001	0.14	RAL-38
500	chr3R	14875175	14875253	roo	393	27	7	78	'4-3	65.43	11.1	0.6	intron	btsz -	chr3R_7_14875001	chr3R_14875001	0.57	RAL-38
501	chr3R	14877834	14877910	Juan	13	4192	11	76	'2-9	60.35	11.3	0.9	intergenic	not near genes	chr3R_11_14875001	chr3R_14875001	0.18	RAL-38
502	chr3R	14879162	14879272	copia	246	4870	12	110	'7-5	70.33	9.9	1.1	intergenic	CG3631 +	chr3R_12_14875001	chr3R_14875001	0.58	RAL-38
503	chr3R	14888678	14888762	diver	5906	224	17	84	'9-8	67.61	13.1	1.2	exon	CG33332 +	chr3R_17_14885001	chr3R_14885001	0.53	RAL-38
504	chr3R	14963626	14963655	jockey	4773	4802	4	29	'1-3	63.82	12.4	0.3	intergenic	not near genes	chr3R_4_14960001	chr3R_14960001	0.25	RAL-38
505	chr3R	15131506	15131546	Bari1	41	1	10	40	'3-7	64.37	10.0	0.9	intron	CG42788 -	chr3R_10_15130001	chr3R_15130001	0.30	RAL-38
506	chr3R	15141926	15142035	HMS-Beagle	6807	7040	13	109	'8-5	66.50	11.2	1.1	3` UTR	GlyS -	chr3R_13_15140001	chr3R_15140001	0.62	RAL-38
507	chr3R	15153804	15153893	roo	31	408	7	89	'2-5	67.23	9.2	0.7	intron	Gyc88E +	chr3R_7_15150001	chr3R_15150001	0.29	RAL-38
508	chr3R	15375934	15376042	Stalker4	13	410	13	108	'2-11	61.28	9.7	1.2	intron	Rbp +	chr3R_13_15375001	chr3R_15375001	0.15	RAL-38
509	chr3R	15783208	15783324	mdg1	7453	7045	11	116	'9-2	66.28	7.0	1.4	intergenic	not near genes	chr3R_11_15780001	chr3R_15780001	0.82	RAL-38
510	chr3R	15876243	15876343	1360	3380	9	6	100	'5-1	70.65	13.4	0.4	intergenic	CG31183 -	chr3R_6_15875001	chr3R_15875001	0.83	RAL-38
511	chr3R	16004059	16004091	jockey	6	27	5	32	'2-3	60.77	19.3	0.2	3` UTR	srp +	chr3R_5_16000001	chr3R_16000001	0.40	RAL-38
512	chr3R	16130298	16130421	opus	111	497	8	123	'6-2	71.75	15.6	0.5	intron	Sb +	chr3R_8_16130001	chr3R_16130001	0.75	RAL-38
513	chr3R	16368803	16368855	Max-element	8233	8491	4	52	'2-2	67.51	12.2	0.3	intergenic	CG10317 -,CG14880 -	chr3R_4_16365001	chr3R_16365001	0.50	RAL-38
514	chr3R	16394602	16394698	Transpac	25	5228	19	96	'9-10	67.68	8.8	1.9	intron	ss -	chr3R_19_16390001	chr3R_16390001	0.47	RAL-38
515	chr3R	16945660	16945769	roo	8678	411	10	109	'2-8	69.92	9.8	0.9	intron	Abd-B -	chr3R_10_16945001	chr3R_16945001	0.20	RAL-38
516	chr3R	16984802	16984885	hopper	16	1393	5	83	'2-3	59.58	10.8	0.4	intron	CG18622 -	chr3R_5_16980001	chr3R_16980001	0.40	RAL-38
517	chr3R	17172993	17173023	297	6969	358	5	30	'4-1	63.07	7.2	0.6	intron	Mur89F -	chr3R_5_17170001	chr3R_17170001	0.80	RAL-38
518	chr3R	17190566	17190621	Bari1	1677	40	4	55	'3-1	72.75	12.2	0.3	intron	Mur89F -	chr3R_4_17190001	chr3R_17190001	0.75	RAL-38
519	chr3R	17218639	17218748	roo	5	9066	13	109	'7-6	68.40	12.2	1.0	exon	CG31262 -	chr3R_13_17215001	chr3R_17215001	0.54	RAL-38
520	chr3R	17243140	17243223	hopper	38	1	7	83	'4-3	69.85	7.5	0.8	intron	beat-IIb -	chr3R_7_17240001	chr3R_17240001	0.57	RAL-38
521	chr3R	17422406	17422527	opus	499	111	27	121	'13-14	68.96	13.9	1.8	intergenic	CG14332 -	chr3R_27_17420001	chr3R_17420001	0.48	RAL-38
522	chr3R	17553907	17553995	Tirant	390	12	8	88	'5-3	68.87	6.7	1.0	intergenic	not near genes	chr3R_8_17550001	chr3R_17550001	0.62	RAL-38
523	chr3R	17673737	17673844	FB	1	8	20	107	'11-9	69.23	14.5	1.3	exon,3` UTR	ald +,alt -	chr3R_20_17670001	chr3R_17670001	0.55	RAL-38
524	chr3R	17733244	17733332	INE-1	556	562	9	88	'7-2	68.08	8.2	1.0	intergenic	Lgr1 +,CG14321 +	chr3R_9_17730001	chr3R_17730001	0.78	RAL-38
525	chr3R	17818130	17818260	mdg1	7084	7076	4	130	'1-3	55.82	6.8	0.5	intron	tinc +	chr3R_4_17815001	chr3R_17815001	0.25	RAL-38
526	chr3R	17834064	17834154	hobo	2709	25	13	90	'8-5	67.94	7.7	1.5	intron	tinc +	chr3R_13_17830001	chr3R_17830001	0.62	RAL-38
527	chr3R	17838174	17838271	hopper	1365	10	10	97	'4-6	64.15	4.3	1.9	intron	tinc +	chr3R_10_17835001	chr3R_17835001	0.40	RAL-38
528	chr3R	18247219	18247319	pogo	5	2082	20	100	'13-7	67.97	15.3	1.2	intron	14-3-3epsilon +	chr3R_20_18245001	chr3R_18245001	0.65	RAL-38
529	chr3R	18298439	18298506	gypsy5	6947	7338	6	67	'3-3	61.14	9.9	0.6	5` UTR	l(3)05822 -	chr3R_6_18295001	chr3R_18295001	0.50	RAL-38
530	chr3R	18404753	18404873	pogo	2	2099	9	120	'3-6	68.44	10.1	0.8	intergenic	koko +,CG7685 +	chr3R_9_18400001	chr3R_18400001	0.33	RAL-38
531	chr3R	18507898	18508004	hopper	10	1410	10	106	'3-7	62.03	7.4	1.2	intron	fru -	chr3R_10_18505001	chr3R_18505001	0.30	RAL-38
532	chr3R	18518649	18518678	hopper	21	21	5	29	'3-2	69.02	5.8	0.7	intron	fru -	chr3R_5_18515001	chr3R_18515001	0.60	RAL-38
533	chr3R	18550070	18550114	BS	4996	4994	8	44	'4-4	60.50	10.2	0.7	intergenic	not near genes	chr3R_8_18550001	chr3R_18550001	0.50	RAL-38
534	chr3R	18563396	18563491	flea	253	4761	21	95	'8-13	54.53	11.9	1.6	intergenic	not near genes	chr3R_21_18560001	chr3R_18560001	0.38	RAL-38
535	chr3R	18708752	18708855	Tabor	475	8	24	103	'15-9	63.36	9.2	2.4	intron,intron	Cha +,VAChT +	chr3R_24_18705001	chr3R_18705001	0.62	RAL-38
536	chr3R	18777002	18777064	roo	9044	21	5	62	'2-3	65.43	6.5	0.7	intron	CG7720 -	chr3R_5_18775001	chr3R_18775001	0.40	RAL-38
537	chr3R	18789539	18789643	hobo	5	2710	10	104	'8-2	61.43	7.3	1.2	intron	CG7720 -	chr3R_10_18785001	chr3R_18785001	0.80	RAL-38
538	chr3R	18894105	18894221	Max-element	8235	8532	15	116	'9-6	68.88	10.9	1.3	intergenic	not near genes	chr3R_15_18890001	chr3R_18890001	0.60	RAL-38
539	chr3R	18917076	18917184	P-element	3	8	12	108	'7-5	50.18	4.4	2.2	intron	Xrp1 +	chr3R_12_18915001	chr3R_18915001	0.58	RAL-38
540	chr3R	19290330	19290388	roo	9064	19	6	58	'5-1	63.87	7.0	0.8	intergenic	not near genes	chr3R_6_19290001	chr3R_19290001	0.83	RAL-38
541	chr3R	19532447	19532556	roo	400	3	11	109	'7-4	70.02	8.6	1.1	intron	Dys +	chr3R_11_19530001	chr3R_19530001	0.64	RAL-38
542	chr3R	19571975	19572076	hobo	5	2932	12	101	'7-5	67.44	7.5	1.4	intron	Dys +	chr3R_12_19570001	chr3R_19570001	0.58	RAL-38
543	chr3R	19591548	19591636	Juan	4198	4019	22	88	'11-11	62.18	10.8	1.9	intron	Dys +	chr3R_22_19590001	chr3R_19590001	0.50	RAL-38
544	chr3R	19609067	19609173	opus	17	499	11	106	'5-6	65.51	8.7	1.1	exon	CG17751 +	chr3R_11_19605001	chr3R_19605001	0.45	RAL-38
545	chr3R	19640783	19640895	297	6585	6974	15	112	'3-12	65.72	7.2	1.8	intron	subdued -	chr3R_15_19640001	chr3R_19640001	0.20	RAL-38
546	chr3R	19691597	19691646	I-element	5296	5345	14	49	'10-4	71.13	7.1	1.7	intron	Naam +	chr3R_14_19690001	chr3R_19690001	0.71	RAL-38
547	chr3R	19758683	19758725	roo	9028	407	6	42	'3-3	69.79	7.3	0.7	intron	GluClalpha +	chr3R_6_19755001	chr3R_19755001	0.50	RAL-38
548	chr3R	19836991	19837090	hopper	1402	1403	6	99	'4-2	59.92	6.2	0.8	intergenic	bnl -	chr3R_6_19835001	chr3R_19835001	0.67	RAL-38
549	chr3R	19890184	19890254	Juan	4026	4181	20	70	'9-11	65.24	9.2	2.0	intergenic	not near genes	chr3R_20_19890001	chr3R_19890001	0.45	RAL-38
550	chr3R	19984341	19984430	BS	2	5080	15	89	'4-11	61.75	8.8	1.5	intron	Hs6st -	chr3R_15_19980001	chr3R_19980001	0.27	RAL-38
551	chr3R	19999932	20000018	jockey	14	4985	12	86	'8-4	61.16	6.4	1.6	intron	Hs6st -	chr3R_12_19995001	chr3R_19995001	0.67	RAL-38
552	chr3R	20125008	20125079	jockey	4983	34	8	71	'7-1	62.28	12.1	0.6	intergenic	not near genes	chr3R_8_20125001	chr3R_20125001	0.88	RAL-38
553	chr3R	20231818	20231938	Burdock	6136	6389	8	120	'4-4	69.32	5.6	1.2	intron	Nlg4 +	chr3R_8_20230001	chr3R_20230001	0.50	RAL-38
554	chr3R	20236917	20237026	Max-element	302	8248	15	109	'8-7	65.73	8.2	1.6	intron	Nlg4 +	chr3R_15_20235001	chr3R_20235001	0.53	RAL-38
555	chr3R	20282634	20282734	Tirant	8496	8	10	100	'3-7	66.31	7.3	1.2	intron	cic +	chr3R_10_20280001	chr3R_20280001	0.30	RAL-38
556	chr3R	20580309	20580410	pogo	20	2098	13	101	'8-5	62.46	9.0	1.3	exon	Srp14 +	chr3R_13_20580001	chr3R_20580001	0.62	RAL-38
557	chr3R	20685452	20685500	blood	7010	7058	14	48	'6-8	63.71	9.4	1.3	intergenic	not near genes	chr3R_14_20685001	chr3R_20685001	0.43	RAL-38
558	chr3R	20685839	20685932	Stalker4	392	11	12	93	'5-7	62.54	6.4	1.6	intergenic	not near genes	chr3R_12_20685001	chr3R_20685001	0.42	RAL-38
559	chr3R	20685899	20685944	Stalker	6893	6848	6	45	'4-2	64.03	10.3	0.5	intergenic	not near genes	chr3R_6_20685001	chr3R_20685001	0.67	RAL-38
560	chr3R	20696582	20696618	jockey	20	35	9	36	'7-2	61.08	13.2	0.6	intron	Oamb -	chr3R_9_20695001	chr3R_20695001	0.78	RAL-38
561	chr3R	20712051	20712152	I-element	5347	3	18	101	'7-11	59.75	11.0	1.5	intron	Oamb -	chr3R_18_20710001	chr3R_20710001	0.39	RAL-38
562	chr3R	20750122	20750201	BS	5059	4757	8	79	'4-4	67.27	11.0	0.7	intron	CG42322 +	chr3R_8_20750001	chr3R_20750001	0.50	RAL-38
563	chr3R	20872014	20872107	springer	7146	7517	9	93	'5-4	65.43	6.2	1.2	intergenic	TotA +	chr3R_9_20870001	chr3R_20870001	0.56	RAL-38
564	chr3R	20881499	20881614	HMS-Beagle	247	10	7	115	'4-3	65.87	7.0	0.9	intergenic	not near genes	chr3R_7_20880001	chr3R_20880001	0.57	RAL-38
565	chr3R	20901672	20901756	Ivk	16	5360	20	84	'10-10	64.79	7.5	2.4	intergenic	CG5621 +	chr3R_20_20900001	chr3R_20900001	0.50	RAL-38
566	chr3R	21271186	21271278	pogo	2080	13	17	92	'4-13	69.34	13.5	1.2	3` UTR,3` UTR	CG5919 +,CG3308 -	chr3R_17_21270001	chr3R_21270001	0.24	RAL-38
567	chr3R	21296071	21296163	P-element	16	8	10	92	'5-5	46.47	9.9	0.9	intergenic	not near genes	chr3R_10_21295001	chr3R_21295001	0.50	RAL-38
568	chr3R	21434515	21434620	P-element	2881	2880	7	105	'4-3	52.17	10.1	0.6	intergenic	lbl -	chr3R_7_21430001	chr3R_21430001	0.57	RAL-38
569	chr3R	21649313	21649386	412	7092	495	10	73	'4-6	69.59	11.9	0.8	intron	E2f -	chr3R_10_21645001	chr3R_21645001	0.40	RAL-38
570	chr3R	21720185	21720278	P-element	17	8	9	93	'8-1	52.23	8.8	0.9	intergenic	not near genes	chr3R_9_21720001	chr3R_21720001	0.89	RAL-38
571	chr3R	21784746	21784844	flea	16	5007	8	98	'4-4	64.79	5.7	1.2	3` UTR,3` UTR	CASK -,CRG -	chr3R_8_21780001	chr3R_21780001	0.50	RAL-38
572	chr3R	22223440	22223501	mdg1	413	7089	8	61	'5-3	69.79	7.5	0.9	intron	SKIP +	chr3R_8_22220001	chr3R_22220001	0.62	RAL-38
573	chr3R	22282825	22282861	jockey	4985	4950	8	36	'4-4	59.27	11.3	0.7	intron	SKIP +	chr3R_8_22280001	chr3R_22280001	0.50	RAL-38
574	chr3R	22312410	22312523	roo	408	8666	13	113	'4-9	68.25	8.1	1.4	intron	CG34377 -	chr3R_13_22310001	chr3R_22310001	0.31	RAL-38
575	chr3R	22341116	22341237	hopper	29	6	14	121	'12-2	65.54	6.9	1.8	intergenic	CG5386 -	chr3R_14_22340001	chr3R_22340001	0.86	RAL-38
576	chr3R	22341203	22341238	jockey	4683	4716	13	35	'5-8	62.55	7.5	1.5	intergenic	CG5386 -	chr3R_13_22340001	chr3R_22340001	0.38	RAL-38
577	chr3R	22874548	22874582	Doc	15	16	7	34	'1-6	56.54	5.3	1.1	intergenic	not near genes	chr3R_7_22870001	chr3R_22870001	0.14	RAL-38
578	chr3R	22878473	22878602	17.6	1	490	13	129	'10-3	63.04	2.9	3.3	intergenic	not near genes	chr3R_13_22875001	chr3R_22875001	0.77	RAL-38
579	chr3R	22968903	22968997	hopper	10	1409	9	94	'3-6	61.65	10.4	0.8	intergenic	not near genes	chr3R_9_22965001	chr3R_22965001	0.33	RAL-38
580	chr3R	23142576	23142606	Transpac	31	4920	6	30	'3-3	63.69	13.6	0.4	intergenic	not near genes	chr3R_6_23140001	chr3R_23140001	0.50	RAL-38
581	chr3R	23449500	23449613	opus	7114	7498	20	113	'3-17	65.80	8.1	2.2	intron	CG4374 -	chr3R_20_23445001	chr3R_23445001	0.15	RAL-38
582	chr3R	23640971	23641089	Burdock	6385	6134	10	118	'6-4	68.63	3.5	2.2	intron	CG31145 -	chr3R_10_23640001	chr3R_23640001	0.60	RAL-38
583	chr3R	23723101	23723213	Burdock	257	6148	15	112	'5-10	66.27	10.4	1.3	intergenic	CG10365 +	chr3R_15_23720001	chr3R_23720001	0.33	RAL-38
584	chr3R	23734557	23734638	opus	7487	10	4	81	'3-1	62.14	5.3	0.6	intron	Hmgcr +	chr3R_4_23730001	chr3R_23730001	0.75	RAL-38
585	chr3R	23876015	23876132	roo	8663	404	19	117	'9-10	67.99	9.0	1.9	intron	Pli -	chr3R_19_23875001	chr3R_23875001	0.47	RAL-38
586	chr3R	23889158	23889273	pogo	2099	7	12	115	'7-5	66.46	5.9	1.7	intron	Pli -	chr3R_12_23885001	chr3R_23885001	0.58	RAL-38
587	chr3R	24096429	24096517	412	16	477	9	88	'8-1	61.69	5.1	1.5	intron	4EHP -	chr3R_9_24095001	chr3R_24095001	0.89	RAL-38
588	chr3R	24463429	24463501	Tirant	13	394	10	72	'8-2	68.99	11.2	0.8	intergenic	CR45649 -	chr3R_10_24460001	chr3R_24460001	0.80	RAL-38
589	chr3R	24591965	24592083	blood	7387	7012	21	118	'11-10	61.91	9.3	2.0	intron	mld +	chr3R_21_24590001	chr3R_24590001	0.52	RAL-38
590	chr3R	24635716	24635819	roo	404	13	21	103	'10-11	67.94	9.0	2.1	3` UTR	puf -	chr3R_21_24635001	chr3R_24635001	0.48	RAL-38
591	chr3R	24678775	24678854	hobo	2927	27	5	79	'3-2	61.10	6.3	0.7	intron	slo +	chr3R_5_24675001	chr3R_24675001	0.60	RAL-38
592	chr3R	24774178	24774270	opus	7113	479	8	92	'3-5	70.73	10.4	0.7	intron	CG42331 +	chr3R_8_24770001	chr3R_24770001	0.38	RAL-38
593	chr3R	25049930	25050016	P-element	21	2876	9	86	'5-4	42.66	8.9	0.9	5` UTR	CG11791 +	chr3R_9_25045001	chr3R_25045001	0.56	RAL-38
594	chr3R	25168988	25169070	Stalker2	7250	404	13	82	'8-5	58.78	6.0	1.9	intergenic	not near genes	chr3R_13_25165001	chr3R_25165001	0.62	RAL-38
595	chr3R	25182064	25182157	mdg1	7041	396	14	93	'7-7	63.13	7.2	1.7	intron	lobo -	chr3R_14_25180001	chr3R_25180001	0.50	RAL-38
596	chr3R	25433299	25433385	hopper	10	1406	8	86	'3-5	70.10	7.5	0.9	intron	Fur1 -	chr3R_8_25430001	chr3R_25430001	0.38	RAL-38
597	chr3R	25444660	25444736	FB	15	1	6	76	'1-5	62.96	5.0	1.0	intron	Fur1 -	chr3R_6_25440001	chr3R_25440001	0.17	RAL-38
598	chr3R	25499733	25499833	hopper	1401	1409	11	100	'3-8	65.98	7.7	1.3	intergenic	not near genes	chr3R_11_25495001	chr3R_25495001	0.27	RAL-38
599	chr3R	25520504	25520611	hobo	1	2928	12	107	'8-4	62.61	9.9	1.1	intron	msi +	chr3R_12_25520001	chr3R_25520001	0.67	RAL-38
600	chr3R	25613357	25613434	297	6969	39	11	77	'8-3	71.61	10.8	0.9	intron	Npl4 -	chr3R_11_25610001	chr3R_25610001	0.73	RAL-38
601	chr3R	25665341	25665429	blood	21	7378	6	88	'4-2	63.26	15.6	0.4	3` UTR	RASSF8 +	chr3R_6_25665001	chr3R_25665001	0.67	RAL-38
602	chr3R	25781640	25781758	412	6	496	11	118	'2-9	63.72	8.9	1.1	intergenic	not near genes	chr3R_11_25780001	chr3R_25780001	0.18	RAL-38
603	chr3R	25807651	25807757	Max-element	294	8243	6	106	'2-4	68.04	6.3	0.8	intergenic	CR45652 +	chr3R_6_25805001	chr3R_25805001	0.33	RAL-38
604	chr3R	25828903	25829006	hobo	2938	14	11	103	'5-6	63.22	8.9	1.1	intergenic	Mst57Dc -	chr3R_11_25825001	chr3R_25825001	0.45	RAL-38
605	chr3R	25927523	25927676	opus	7114	498	18	153	'4-14	65.87	7.8	2.0	intron	CCAP-R -	chr3R_18_25925001	chr3R_25925001	0.22	RAL-38
606	chr3R	26023237	26023273	jockey	3	23	4	36	'1-3	53.28	11.9	0.3	intergenic	E(spl)m3-HLH +	chr3R_4_26020001	chr3R_26020001	0.25	RAL-38
607	chr3R	26197486	26197586	pogo	17	2100	6	100	'3-3	67.00	7.0	0.8	intron	CR44320 +	chr3R_6_26195001	chr3R_26195001	0.50	RAL-38
608	chr3R	26398196	26398280	hopper	11	26	8	84	'4-4	67.24	7.3	1.0	intergenic	not near genes	chr3R_8_26395001	chr3R_26395001	0.50	RAL-38
609	chr3R	26429124	26429234	pogo	6	2100	10	110	'7-3	66.48	6.4	1.4	5` UTR	CR43434 +	chr3R_10_26425001	chr3R_26425001	0.70	RAL-38
610	chr3R	26434659	26434770	Tabor	7324	10	5	111	'4-1	70.53	6.4	0.7	intergenic	not near genes	chr3R_5_26430001	chr3R_26430001	0.80	RAL-38
611	chr3R	26461733	26461782	G2	418	400	12	49	'8-4	64.63	5.3	1.9	intron	CG5455 +	chr3R_12_26460001	chr3R_26460001	0.67	RAL-38
612	chr3R	26644263	26644305	jockey	4814	4771	11	42	'7-4	61.44	8.5	1.2	intergenic	not near genes	chr3R_11_26640001	chr3R_26640001	0.64	RAL-38
613	chr3R	26862234	26862348	mdg1	7455	7041	8	114	'3-5	70.26	10.0	0.7	intron	Lerp -	chr3R_8_26860001	chr3R_26860001	0.38	RAL-38
614	chr3R	27088418	27088452	X-element	4246	4279	6	34	'3-3	60.11	13.7	0.4	intergenic	not near genes	chr3R_6_27085001	chr3R_27085001	0.50	RAL-38
615	chr3R	27133574	27133672	Bari1	1699	1	20	98	'10-10	62.80	4.7	3.5	intron	CG6051 -	chr3R_20_27130001	chr3R_27130001	0.50	RAL-38
616	chr3R	27352385	27352486	roo	8670	404	13	101	'8-5	64.86	4.0	2.6	intron	CG42534 +	chr3R_13_27350001	chr3R_27350001	0.62	RAL-38
617	chr3R	27455536	27455640	Transpac	304	4929	8	104	'1-7	65.92	7.6	0.9	intergenic	not near genes	chr3R_8_27455001	chr3R_27455001	0.12	RAL-38
618	chr3R	27607641	27607788	Transib5	2587	2589	4	147	'3-1	75.79	7.4	0.5	intergenic	Tusp +,dsd -	chr3R_4_27605001	chr3R_27605001	0.75	RAL-38
619	chr3R	27619698	27619780	hopper	13	14	7	82	'6-1	57.56	8.0	0.8	intron	Tusp +	chr3R_7_27615001	chr3R_27615001	0.86	RAL-38
620	chr3R	27768804	27768874	297	7	384	5	70	'3-2	60.16	7.6	0.6	3` UTR	CG34353 -	chr3R_5_27765001	chr3R_27765001	0.60	RAL-38
621	chr3R	27794796	27794881	roo	8696	405	14	85	'6-8	67.41	6.7	1.8	intron	CG34353 -	chr3R_14_27790001	chr3R_27790001	0.43	RAL-38
622	chr3R	27859175	27859274	hopper	3	4	6	99	'3-3	68.07	5.8	0.9	intron	CG34353 -	chr3R_6_27855001	chr3R_27855001	0.50	RAL-38
623	chr3R	28339683	28339757	P-element	30	2883	15	74	'4-11	41.98	8.6	1.6	5` UTR	Gfat2 -	chr3R_15_28335001	chr3R_28335001	0.27	RAL-38
624	chr3R	28396578	28396670	hobo	2931	6	15	92	'2-13	65.10	11.7	1.2	intergenic	not near genes	chr3R_15_28395001	chr3R_28395001	0.13	RAL-38
625	chr3R	28443682	28443782	Burdock	6144	6377	11	100	'6-5	67.73	6.2	1.5	intron	beat-VI +	chr3R_11_28440001	chr3R_28440001	0.55	RAL-38
626	chr3R	28564146	28564271	opus	111	499	8	125	'3-5	67.24	9.5	0.8	intergenic	not near genes	chr3R_8_28560001	chr3R_28560001	0.38	RAL-38
627	chr3R	28702069	28702176	roo	398	3	19	107	'11-8	66.29	11.1	1.6	intron	htt +	chr3R_19_28700001	chr3R_28700001	0.58	RAL-38
628	chr3R	28724329	28724370	F-element	142	183	24	41	'13-11	63.45	16.0	1.4	intron	htt +	chr3R_24_28720001	chr3R_28720001	0.54	RAL-38
629	chr3R	28725761	28725825	I-element	5338	4883	7	64	'4-3	61.46	11.8	0.5	intron	htt +	chr3R_7_28725001	chr3R_28725001	0.57	RAL-38
630	chr3R	28755858	28755944	I-element	5341	7	8	86	'3-5	64.31	6.4	1.1	intron	CG9997 -	chr3R_8_28755001	chr3R_28755001	0.38	RAL-38
631	chr3R	28773185	28773277	hobo	1	2708	9	92	'8-1	65.78	9.1	0.9	intergenic	not near genes	chr3R_9_28770001	chr3R_28770001	0.89	RAL-38
632	chr3R	29243838	29243943	flea	249	4767	11	105	'3-8	62.68	9.8	1.0	exon	CG31445 -	chr3R_11_29240001	chr3R_29240001	0.27	RAL-38
633	chr3R	29310064	29310160	mdg1	39	39	4	96	'1-3	64.40	2.7	1.1	intergenic	not near genes	chr3R_4_29310001	chr3R_29310001	0.25	RAL-38
634	chr3R	29430273	29430307	jockey	4685	4684	8	34	'4-4	61.60	8.7	0.8	intron	Ptp99A +	chr3R_8_29430001	chr3R_29430001	0.50	RAL-38
635	chr3R	29623702	29623822	mdg3	5253	246	8	120	'4-4	69.35	11.3	0.7	intergenic	not near genes	chr3R_8_29620001	chr3R_29620001	0.50	RAL-38
636	chr3R	29868004	29868037	S-element	1675	8	9	33	'8-1	66.70	11.9	0.7	intron	Zip99C -	chr3R_9_29865001	chr3R_29865001	0.89	RAL-38
637	chr3R	30116234	30116346	blood	378	10	16	112	'5-11	67.03	9.7	1.5	intron	sima +	chr3R_16_30115001	chr3R_30115001	0.31	RAL-38
638	chr3R	30123159	30123214	Doc	9	50	25	55	'9-16	64.48	12.4	1.9	5` UTR	CG45072 -	chr3R_25_30120001	chr3R_30120001	0.36	RAL-38
639	chr3R	30144311	30144426	mdg1	420	5	21	115	'13-8	69.10	13.5	1.4	intron	AdoR -	chr3R_21_30140001	chr3R_30140001	0.62	RAL-38
640	chr3R	30159480	30159598	pogo	3	2098	21	118	'8-13	64.57	9.6	2.0	intron	CG11498 -	chr3R_21_30155001	chr3R_30155001	0.38	RAL-38
641	chr3R	30302823	30302921	FB	15	3	9	98	'6-3	66.33	8.0	1.0	intron	hdc +	chr3R_9_30300001	chr3R_30300001	0.67	RAL-38
642	chr3R	30337230	30337343	Transpac	4924	306	4	113	'1-3	67.63	8.5	0.4	intron	hdc +	chr3R_4_30335001	chr3R_30335001	0.25	RAL-38
643	chr3R	30345675	30345787	297	6972	6588	10	112	'8-2	69.00	6.5	1.3	intron	hdc +	chr3R_10_30345001	chr3R_30345001	0.80	RAL-38
644	chr3R	30375465	30375566	roo	8665	9053	11	101	'6-5	65.70	9.8	1.0	intergenic	not near genes	chr3R_11_30375001	chr3R_30375001	0.55	RAL-38
645	chr3R	30466967	30467088	roo	408	8664	9	121	'4-5	66.23	4.9	1.5	intron	PH4alphaEFB +	chr3R_9_30465001	chr3R_30465001	0.44	RAL-38
646	chr3R	30859370	30859516	Burdock	257	6140	8	146	'5-3	59.08	4.3	1.5	intergenic	not near genes	chr3R_8_30855001	chr3R_30855001	0.62	RAL-38
647	chr3R	30958986	30959032	F-element	4639	4593	7	46	'3-4	64.26	12.4	0.5	intergenic	not near genes	chr3R_7_30955001	chr3R_30955001	0.43	RAL-38
648	chr3R	31045712	31045891	INE-1	91	144	9	179	'3-6	74.77	5.0	1.5	intron	CanA1 +	chr3R_9_31045001	chr3R_31045001	0.33	RAL-38
649	chr3R	31426301	31426387	I-element	11	5346	13	86	'9-4	65.15	11.7	1.0	intron	Gprk2 +	chr3R_13_31425001	chr3R_31425001	0.69	RAL-38
650	chr3R	31808738	31808826	P-element	12	2869	19	88	'8-11	46.04	9.2	1.9	intron	CG11576 -	chr3R_19_31805001	chr3R_31805001	0.42	RAL-38
651	chr3R	31965173	31965246	1360	3374	3375	7	73	'3-4	64.41	11.1	0.6	intron	heph -	chr3R_7_31965001	chr3R_31965001	0.43	RAL-38
652	chr4	165112	165220	FB	1	5	19	108	'7-12	63.66	3.3	4.4	intron	CG33978 -	chr4_19_165001	chr4_165001	0.37	RAL-38
653	chr4	311185	311232	1360	2	3351	13	47	'7-6	69.91	5.4	2.0	3` UTR	Zip102B -	chr4_13_310001	chr4_310001	0.54	RAL-38
654	chr4	311569	311601	1360	43	11	8	32	'3-5	64.31	5.2	1.3	3` UTR	Zip102B -	chr4_8_310001	chr4_310001	0.38	RAL-38
655	chr4	667676	667793	gypsy5	6937	410	39	117	'18-21	64.56	9.5	3.7	intron	Slip1 +	chr4_39_665001	chr4_665001	0.46	RAL-38
656	chr4	818119	818217	Bari1	1671	24	6	98	'5-1	65.47	6.1	0.8	intron	Sox102F -	chr4_6_815001	chr4_815001	0.83	RAL-38
657	chr4	843247	843301	INE-1	503	508	4	54	'3-1	70.77	9.6	0.4	intron	fd102C -	chr4_4_840001	chr4_840001	0.75	RAL-38
658	chr4	1163662	1163711	roo	9024	8921	6	49	'5-1	66.98	2.9	1.5	intron	Kif3C +	chr4_6_1160001	chr4_1160001	0.83	RAL-38
659	chrX	175025	175122	P-element	10	1	13	97	'2-11	48.17	4.4	2.4	intron	tyn +	chrX_13_175001	chrX_175001	0.15	RAL-38
660	chrX	354004	354120	copia	6	257	18	116	'6-12	66.92	6.3	2.5	intron	CG32816 -	chrX_18_350001	chrX_350001	0.33	RAL-38
661	chrX	508940	509060	opus	494	7114	15	120	'12-3	66.30	9.3	1.5	3` UTR	svr +	chrX_15_505001	chrX_505001	0.80	RAL-38
662	chrX	669084	669212	roo	410	4	21	128	'13-8	65.02	6.3	2.9	intergenic	not near genes	chrX_21_665001	chrX_665001	0.62	RAL-38
663	chrX	681407	681473	hopper	16	7	17	66	'5-12	64.05	4.1	3.3	intergenic	not near genes	chrX_17_680001	chrX_680001	0.29	RAL-38
664	chrX	685313	685412	BS	5080	4993	28	99	'6-22	62.05	7.6	3.3	intergenic	not near genes	chrX_28_685001	chrX_685001	0.21	RAL-38
665	chrX	756990	757089	roo	15	401	4	99	'2-2	66.84	8.9	0.4	intron	CG5254 +	chrX_4_755001	chrX_755001	0.50	RAL-38
666	chrX	1014019	1014167	Bari1	1705	21	9	148	'5-4	62.76	8.9	0.9	5` UTR,3` UTR	su(w[a]) +,CG11638 -	chrX_9_1010001	chrX_1010001	0.56	RAL-38
667	chrX	1063233	1063283	jockey	14	9	8	50	'1-7	64.16	6.5	1.1	intron	CR44779 +	chrX_8_1060001	chrX_1060001	0.12	RAL-38
668	chrX	1129569	1129636	roo	8704	396	12	67	'6-6	68.11	2.1	3.9	intron	CG3655 -	chrX_12_1125001	chrX_1125001	0.50	RAL-38
669	chrX	1411424	1411520	roo	406	7	24	96	'21-3	64.26	7.5	2.8	intron	futsch +	chrX_24_1410001	chrX_1410001	0.88	RAL-38
670	chrX	1483563	1483673	Burdock	6143	250	21	110	'11-10	65.83	7.6	2.4	intron	inc +	chrX_21_1480001	chrX_1480001	0.52	RAL-38
671	chrX	1686520	1686563	roo	8694	389	7	43	'4-3	65.16	10.1	0.6	intron	CG32809 -	chrX_7_1685001	chrX_1685001	0.57	RAL-38
672	chrX	1755093	1755182	412	7526	12	21	89	'11-10	63.04	2.0	7.0	intergenic	not near genes	chrX_21_1755001	chrX_1755001	0.52	RAL-38
673	chrX	2318859	2318982	Transpac	309	4919	7	123	'1-6	58.53	3.1	1.7	intron	phl +	chrX_7_2315001	chrX_2315001	0.14	RAL-38
674	chrX	2781204	2781313	FB	1	2	27	109	'8-19	64.69	6.0	3.9	intron	kirre +	chrX_27_2780001	chrX_2780001	0.30	RAL-38
675	chrX	2958385	2958413	I-element	5342	5314	9	28	'6-3	59.94	11.9	0.7	intron,intron	kirre +,rst -	chrX_9_2955001	chrX_2955001	0.67	RAL-38
676	chrX	3657148	3657238	Bari1	1679	7	4	90	'2-2	66.05	5.5	0.6	intron	AstA-R1 +	chrX_4_3655001	chrX_3655001	0.50	RAL-38
677	chrX	3726050	3726151	Bari1	1698	10	17	101	'3-14	63.90	3.4	3.9	intron	tlk +	chrX_17_3725001	chrX_3725001	0.18	RAL-38
678	chrX	3771952	3772055	blood	7	7386	16	103	'13-3	64.45	6.2	2.2	intron	tlk +	chrX_16_3770001	chrX_3770001	0.81	RAL-38
679	chrX	4093530	4093610	hopper	27	14	15	80	'9-6	61.05	9.6	1.4	intergenic	not near genes	chrX_15_4090001	chrX_4090001	0.60	RAL-38
680	chrX	4352968	4353000	jockey	4672	4689	9	32	'6-3	63.03	7.6	1.0	intron	norpA +	chrX_9_4350001	chrX_4350001	0.67	RAL-38
681	chrX	4510814	4510859	Doc	8	151	6	45	'5-1	62.97	6.1	0.8	intron	CR32773 -	chrX_6_4510001	chrX_4510001	0.83	RAL-38
682	chrX	4778530	4778630	hopper	1412	1397	20	100	'8-12	63.56	3.2	4.8	intergenic	not near genes	chrX_20_4775001	chrX_4775001	0.40	RAL-38
683	chrX	4791689	4791733	jockey	64	17	6	44	'3-3	60.24	6.8	0.8	intergenic	not near genes	chrX_6_4790001	chrX_4790001	0.50	RAL-38
684	chrX	4874901	4875008	mdg3	5494	5252	13	107	'6-7	64.08	5.3	2.1	intron	CG42594 +	chrX_13_4870001	chrX_4870001	0.46	RAL-38
685	chrX	5015454	5015486	opus	4	7034	5	32	'3-2	63.62	11.1	0.4	intron	CR44833 -	chrX_5_5015001	chrX_5015001	0.60	RAL-38
686	chrX	5372775	5372895	opus	4	7114	13	120	'11-2	67.40	6.2	1.8	intron	SK +	chrX_13_5370001	chrX_5370001	0.85	RAL-38
687	chrX	5887089	5887188	opus	1	497	17	99	'9-8	69.50	4.7	3.0	intron	CR45668 -	chrX_17_5885001	chrX_5885001	0.53	RAL-38
688	chrX	5887662	5887774	Transpac	5222	3	9	112	'2-7	70.32	4.9	1.5	intron	CR45668 -	chrX_9_5885001	chrX_5885001	0.22	RAL-38
689	chrX	6408787	6408908	roo	411	2	25	121	'14-11	64.80	6.7	3.2	intergenic	not near genes	chrX_25_6405001	chrX_6405001	0.56	RAL-38
690	chrX	6507401	6507450	roo	400	404	9	49	'5-4	66.71	2.6	2.5	intron	CG42340 -	chrX_9_6505001	chrX_6505001	0.56	RAL-38
691	chrX	6935290	6935403	roo	8663	402	36	113	'22-14	68.11	6.8	4.6	intron	CG14431 +	chrX_36_6935001	chrX_6935001	0.61	RAL-38
692	chrX	7055502	7055592	hobo	2923	11	13	90	'3-10	60.58	7.4	1.5	intron	CG12541 -	chrX_13_7055001	chrX_7055001	0.23	RAL-38
693	chrX	7146073	7146188	roo	402	8662	28	115	'11-17	68.98	6.1	3.9	intron,3` UTR	CG9650 +,CR32730 -	chrX_28_7145001	chrX_7145001	0.39	RAL-38
694	chrX	7446059	7446174	Max-element	296	8235	15	115	'2-13	63.50	7.2	1.8	5` UTR	CR45533 +	chrX_15_7445001	chrX_7445001	0.13	RAL-38
695	chrX	8162807	8162918	1360	3386	3384	29	111	'16-13	67.37	5.5	4.5	intergenic	CG10761 -,CR45536 +	chrX_29_8160001	chrX_8160001	0.55	RAL-38
696	chrX	8361551	8361627	FB	1	24	14	76	'8-6	63.07	4.2	2.7	intron	nAChRalpha3 -	chrX_14_8360001	chrX_8360001	0.57	RAL-38
697	chrX	8364741	8364769	jockey	4719	4681	10	28	'5-5	64.62	7.8	1.1	intron	nAChRalpha3 -	chrX_10_8360001	chrX_8360001	0.50	RAL-38
698	chrX	8385597	8385713	roo	8664	404	27	116	'14-13	66.26	5.7	4.0	intergenic	CG1387 +	chrX_27_8385001	chrX_8385001	0.52	RAL-38
699	chrX	8894181	8894288	P-element	10	2886	14	107	'8-6	51.05	3.7	3.0	intron	Moe -	chrX_14_8890001	chrX_8890001	0.57	RAL-38
700	chrX	8920739	8920847	rover	2	347	8	108	'6-2	65.31	6.7	1.0	intron	rdgA +	chrX_8_8920001	chrX_8920001	0.75	RAL-38
701	chrX	8927078	8927166	Bari1	15	1685	8	88	'5-3	62.87	9.8	0.7	intron	rdgA +	chrX_8_8925001	chrX_8925001	0.62	RAL-38
702	chrX	8938665	8938773	Tirant	8504	13	19	108	'10-9	66.70	7.3	2.3	intron	rdgA +	chrX_19_8935001	chrX_8935001	0.53	RAL-38
703	chrX	9003843	9003951	roo	399	3	19	108	'10-9	67.70	5.2	3.1	intron,intron	rdgA +,CR43836 -	chrX_19_9000001	chrX_9000001	0.53	RAL-38
704	chrX	9032279	9032400	roo	410	2	26	121	'13-13	68.87	3.2	6.2	intron,intron	CR43836 -,CG42388 +	chrX_26_9030001	chrX_9030001	0.50	RAL-38
705	chrX	9070119	9070220	P-element	2883	3	26	101	'17-9	45.45	2.0	8.7	5` UTR	CG10970 -	chrX_26_9070001	chrX_9070001	0.65	RAL-38
706	chrX	9470597	9470707	pogo	2090	6	23	110	'11-12	64.40	6.7	3.0	intron	mgl -	chrX_23_9470001	chrX_9470001	0.48	RAL-38
707	chrX	9633869	9633976	412	5	477	13	107	'4-9	57.47	4.4	2.4	intron	l(1)G0232 -	chrX_13_9630001	chrX_9630001	0.31	RAL-38
708	chrX	9650155	9650260	Juan	4031	4208	28	105	'11-17	65.50	9.2	2.7	intron	l(1)G0232 -	chrX_28_9650001	chrX_9650001	0.39	RAL-38
709	chrX	9872284	9872378	flea	4776	247	25	94	'6-19	68.10	4.5	4.5	intergenic	CG32695 -	chrX_25_9870001	chrX_9870001	0.24	RAL-38
710	chrX	9884023	9884121	opus	493	19	25	98	'19-6	67.09	3.5	5.6	intergenic	CG9689 +,CG9691 +	chrX_25_9880001	chrX_9880001	0.76	RAL-38
711	chrX	10152921	10153040	roo	407	8664	25	119	'11-14	70.32	6.4	3.4	intron	CR44894 -	chrX_25_10150001	chrX_10150001	0.44	RAL-38
712	chrX	10247078	10247141	hobo	8	2932	16	63	'11-5	63.56	5.1	2.6	intron	Hk -	chrX_16_10245001	chrX_10245001	0.69	RAL-38
713	chrX	10336655	10336759	297	395	6589	13	104	'8-5	65.54	4.0	2.6	intron	CG43740 +	chrX_13_10335001	chrX_10335001	0.62	RAL-38
714	chrX	10675158	10675261	I-element	4	5347	21	103	'7-14	64.97	5.0	3.5	intron	X11Lbeta +	chrX_21_10675001	chrX_10675001	0.33	RAL-38
715	chrX	10757628	10757703	P-element	1	2868	9	75	'3-6	48.89	4.8	1.6	5` UTR	Rph -	chrX_9_10755001	chrX_10755001	0.33	RAL-38
716	chrX	10974398	10974428	297	6942	6972	8	30	'3-5	69.47	6.8	1.0	intron	CG42339 -	chrX_8_10970001	chrX_10970001	0.38	RAL-38
717	chrX	11233399	11233429	jockey	4983	4953	11	30	'3-8	60.86	6.1	1.5	intron	CG44422 -	chrX_11_11230001	chrX_11230001	0.27	RAL-38
718	chrX	11696577	11696703	TLD2_LTR	94	94	6	126	'5-1	71.23	6.8	0.8	intron	PhKgamma +	chrX_6_11695001	chrX_11695001	0.83	RAL-38
719	chrX	11714769	11714840	P-element	2848	2881	15	71	'10-5	41.45	6.9	1.9	5` UTR	Amun -	chrX_15_11710001	chrX_11710001	0.67	RAL-38
720	chrX	12076825	12076864	jockey	4603	4564	12	39	'7-5	61.82	2.1	3.9	intron,intron	CR43960 +,Ten-a +	chrX_12_12075001	chrX_12075001	0.58	RAL-38
721	chrX	12480277	12480427	1360	3369	16	8	150	'1-7	66.75	3.5	1.8	intergenic	not near genes	chrX_8_12480001	chrX_12480001	0.12	RAL-38
722	chrX	12551443	12551542	Bari1	3	1698	5	99	'3-2	67.40	3.4	1.1	intron	CG43921 -	chrX_5_12550001	chrX_12550001	0.60	RAL-38
723	chrX	12620425	12620542	297	6971	6	23	117	'17-6	62.73	4.3	4.3	intron	CG11085 +	chrX_23_12620001	chrX_12620001	0.74	RAL-38
724	chrX	12690203	12690299	Quasimodo	7363	5	9	96	'1-8	66.42	3.5	2.0	exon	Smr -	chrX_9_12690001	chrX_12690001	0.11	RAL-38
725	chrX	12737998	12738205	S-element	1703	74	4	207	'3-1	62.31	9.3	0.4	intron	Smr -	chrX_4_12735001	chrX_12735001	0.75	RAL-38
726	chrX	13018314	13018400	hobo	2936	20	10	86	'4-6	63.24	3.3	2.3	intron	rad +	chrX_10_13015001	chrX_13015001	0.40	RAL-38
727	chrX	13441767	13441859	Juan	4208	10	26	92	'15-11	60.98	2.5	7.4	intergenic	not near genes	chrX_26_13440001	chrX_13440001	0.58	RAL-38
728	chrX	13795212	13795324	roo	8629	398	10	112	'7-3	59.48	4.8	1.7	intron	inaE +	chrX_10_13795001	chrX_13795001	0.70	RAL-38
729	chrX	14103570	14103683	297	394	6590	8	113	'7-1	66.05	4.3	1.5	intergenic	not near genes	chrX_8_14100001	chrX_14100001	0.88	RAL-38
730	chrX	14174304	14174416	3S18	5766	333	18	112	'12-6	63.36	5.1	3.0	intergenic	CG1368 +	chrX_18_14170001	chrX_14170001	0.67	RAL-38
731	chrX	14567628	14567713	hobo	2708	25	11	85	'3-8	66.18	4.9	1.9	intergenic	not near genes	chrX_11_14565001	chrX_14565001	0.27	RAL-38
732	chrX	14700753	14700798	P-element	47	2872	11	45	'5-6	36.89	2.5	3.1	intron	NetB -	chrX_11_14700001	chrX_14700001	0.45	RAL-38
733	chrX	14827563	14827612	G2	3015	3064	15	49	'11-4	68.30	8.2	1.6	3` UTR	CG14408 -	chrX_15_14825001	chrX_14825001	0.73	RAL-38
734	chrX	15250591	15250679	Juan	4203	4055	43	88	'28-15	63.36	9.4	4.1	intergenic	not near genes	chrX_43_15250001	chrX_15250001	0.65	RAL-38
735	chrX	15313066	15313181	412	491	4	37	115	'18-19	62.19	5.0	6.2	intron	gce +	chrX_37_15310001	chrX_15310001	0.49	RAL-38
736	chrX	15385798	15385906	roo	8663	395	25	108	'14-11	66.89	7.7	2.9	intergenic	Cngl -,CG9164 -	chrX_25_15385001	chrX_15385001	0.56	RAL-38
737	chrX	15454652	15454771	Bari1	1705	4	33	119	'18-15	68.31	8.2	3.6	intron	CG11655 +	chrX_33_15450001	chrX_15450001	0.55	RAL-38
738	chrX	15635749	15635792	pogo	2057	2100	7	43	'4-3	70.65	6.6	0.9	intergenic	not near genes	chrX_7_15635001	chrX_15635001	0.57	RAL-38
739	chrX	15851424	15851519	Bari1	24	1701	11	95	'2-9	61.32	8.1	1.2	intron	UBL3 -	chrX_11_15850001	chrX_15850001	0.18	RAL-38
740	chrX	15946710	15946792	flea	4794	255	24	82	'9-15	70.94	8.0	2.7	intergenic	mmd -,Rrp47 +	chrX_24_15945001	chrX_15945001	0.38	RAL-38
741	chrX	16660872	16660989	S-element	1713	4	14	117	'8-6	66.83	7.2	1.7	intron	r +	chrX_14_16660001	chrX_16660001	0.57	RAL-38
742	chrX	16727005	16727119	jockey2	3356	3337	13	114	'11-2	77.35	5.7	1.9	intergenic	CG32572 +,CG9634 -	chrX_13_16725001	chrX_16725001	0.85	RAL-38
743	chrX	18018909	18018954	P-element	25	8	12	45	'6-6	37.26	2.8	3.2	intron	Sh -	chrX_12_18015001	chrX_18015001	0.50	RAL-38
744	chrX	18056817	18056851	Doc	6	14	13	34	'7-6	55.36	6.3	1.8	intron	Sh -	chrX_13_18055001	chrX_18055001	0.54	RAL-38
745	chrX	18193706	18193803	hopper	1408	17	21	97	'9-12	61.02	7.0	2.6	intron	Frq2 +	chrX_21_18190001	chrX_18190001	0.43	RAL-38
746	chrX	18239080	18239373	jockey	4579	4808	17	293	'5-12	63.72	4.6	3.0	intergenic	not near genes	chrX_17_18235001	chrX_18235001	0.29	RAL-38
747	chrX	18291957	18291991	I-element	5315	5344	16	34	'8-8	62.59	10.7	1.4	intergenic	CR15061 +	chrX_16_18290001	chrX_18290001	0.50	RAL-38
748	chrX	18319969	18320010	jockey	4677	4678	9	41	'4-5	59.89	9.2	0.9	intron	CG6023 -	chrX_9_18315001	chrX_18315001	0.44	RAL-38
749	chrX	18442661	18442777	17.6	490	4	24	116	'11-13	68.32	6.3	3.3	intergenic	CG32547 -	chrX_24_18440001	chrX_18440001	0.46	RAL-38
750	chrX	19112383	19112501	diver	5891	226	27	118	'8-19	61.52	7.3	3.3	intergenic	not near genes	chrX_27_19110001	chrX_19110001	0.30	RAL-38
751	chrX	19121205	19121277	hobo	2921	14	8	72	'4-4	57.66	5.6	1.2	intergenic	not near genes	chrX_8_19120001	chrX_19120001	0.50	RAL-38
752	chrX	19298714	19298794	P-element	2880	30	7	80	'4-3	52.16	6.1	1.0	intergenic	not near genes	chrX_7_19295001	chrX_19295001	0.57	RAL-38
753	chrX	19316820	19316928	Bari1	1705	8	14	108	'5-9	61.82	2.3	4.2	intron	out -	chrX_14_19315001	chrX_19315001	0.36	RAL-38
754	chrX	19562121	19562171	X-element	4622	4622	7	50	'4-3	63.42	7.5	0.8	intron	Grip84 -	chrX_7_19560001	chrX_19560001	0.57	RAL-38
755	chrX	19723900	19724015	roo	407	8668	32	115	'10-22	67.46	3.6	7.0	intron	CG12531 +	chrX_32_19720001	chrX_19720001	0.31	RAL-38
756	chrX	19745667	19745714	Max-element	313	8517	13	47	'7-6	65.15	25.0	0.5	3` UTR,3` UTR	CG33932 +,Rpp20 +	chrX_13_19745001	chrX_19745001	0.54	RAL-38
757	chrX	20011063	20011151	297	6612	391	12	88	'2-10	65.68	5.0	2.0	intron	Dop2R -	chrX_12_20010001	chrX_20010001	0.17	RAL-38
758	chrX	20048803	20048951	roo	9054	8650	20	148	'15-5	64.91	6.1	2.8	intron	Dop2R -	chrX_20_20045001	chrX_20045001	0.75	RAL-38
759	chrX	20106317	20106354	hopper	4	1408	15	37	'4-11	66.10	8.6	1.6	intergenic	not near genes	chrX_15_20105001	chrX_20105001	0.27	RAL-38
760	chrX	20360534	20360655	HMS-Beagle	6799	248	33	121	'16-17	67.49	5.5	5.1	intergenic	not near genes	chrX_33_20360001	chrX_20360001	0.48	RAL-38
761	chrX	20454093	20454167	hobo	2918	18	9	74	'3-6	63.45	6.3	1.2	intron	CG32506 +	chrX_9_20450001	chrX_20450001	0.33	RAL-38
762	chrX	20645471	20645503	Juan	4199	4167	13	32	'7-6	64.50	3.8	2.7	intergenic	not near genes	chrX_13_20645001	chrX_20645001	0.54	RAL-38
763	chrX	20715890	20716038	F-element	23	107	8	148	'7-1	60.02	8.3	0.9	intergenic	not near genes	chrX_8_20715001	chrX_20715001	0.88	RAL-38
764	chrX	20870060	20870177	copia	254	2	35	117	'19-16	68.15	7.6	4.1	intron	shakB -	chrX_35_20870001	chrX_20870001	0.54	RAL-38
765	chrX	21087563	21087614	mdg3	5254	5257	10	51	'4-6	63.71	2.3	3.0	intergenic	not near genes	chrX_10_21085001	chrX_21085001	0.40	RAL-38
766	chrX	21129699	21129815	pogo	1	2100	9	116	'2-7	67.12	5.9	1.3	intron	CG34120 +	chrX_9_21125001	chrX_21125001	0.22	RAL-38
767	chrX	21204982	21205163	1360	3373	119	9	181	'5-4	57.66	2.0	3.0	intergenic	CG32521 -	chrX_9_21200001	chrX_21200001	0.56	RAL-38
768	chrX	21474405	21474431	1731	19	45	5	26	'3-2	70.46	9.7	0.5	intergenic	not near genes	chrX_5_21470001	chrX_21470001	0.60	RAL-38
769	chrX	21637867	21637915	412	50	2	12	48	'4-8	63.79	10.2	1.1	intergenic	not near genes	chrX_12_21635001	chrX_21635001	0.33	RAL-38
770	chrX	21639618	21639708	Tirant	8495	7	15	90	'12-3	63.97	10.9	1.3	intergenic	not near genes	chrX_15_21635001	chrX_21635001	0.80	RAL-38
771	chrX	21667899	21667934	gypsy2	6493	6508	22	35	'16-6	67.90	1.3	9.6	intergenic	not near genes	chrX_22_21665001	chrX_21665001	0.73	RAL-38
772	chrX	21668344	21668459	412	494	7	17	115	'5-12	62.63	5.2	2.7	intergenic	not near genes	chrX_17_21665001	chrX_21665001	0.29	RAL-38
773	chrX	21668711	21668769	mdg1	7454	404	9	58	'6-3	60.38	8.9	0.9	intergenic	not near genes	chrX_9_21665001	chrX_21665001	0.67	RAL-38
774	chrX	22218795	22218850	1731	4310	4338	19	55	'8-11	66.26	0.0	19.0	intergenic	not near genes	chrX_19_22215001	chrX_22215001	0.42	RAL-38
775	chrX	22277697	22277795	roo	408	8686	6	98	'2-4	63.72	12.7	0.4	intergenic	not near genes	chrX_6_22275001	chrX_22275001	0.33	RAL-38
776	chrX	22519769	22519887	S-element	1713	1713	14	118	'10-4	64.94	7.1	1.7	intron	CG17600 +	chrX_14_22515001	chrX_22515001	0.71	RAL-38
777	chrX	23108301	23108336	BS3	1441	1406	7	35	'3-4	60.04	15.4	0.4	3` UTR	ATbp +	chrX_7_23105001	chrX_23105001	0.43	RAL-38
778	chrY	864548	864586	INE-1	127	34	4	38	'1-3	63.17	12.8	0.3	intergenic	not near genes	chrY_4_860001	chrY_860001	0.25	RAL-38
779	chrY	975844	975928	1360	3355	1	7	84	'4-3	71.81	99.6	0.1	intergenic	not near genes	chrY_7_975001	chrY_975001	0.57	RAL-38
780	chrY	2720330	2720366	rover	304	340	9	36	'3-6	66.27	4.2	1.7	intergenic	not near genes	chrY_9_2720001	chrY_2720001	0.33	RAL-38
781	chrY	3630459	3630541	flea	4773	4991	12	82	'5-7	60.44	1.4	5.0	intergenic	not near genes	chrY_12_3630001	chrY_3630001	0.42	RAL-38