SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 42787 42834 chr2L 42895 42936 18 102 3.0 6.5 4.8 3.1 149 chr2L 42787 intron Cda5 - chr2L 42862 intron Cda5 - chr2L 42936 intron Cda5 - chr2L_18_40001 chr2L_40001 RAL-383 2 chr2L 47445 47448 chr2L 52569 52573 jockey 6 5125 6.5 7.0 6.8 0.8 5128 chr2L 47445 intron Cda5 - chr2L 50009 intron Cda5 - chr2L 52573 intron Cda5 - chr2L_6_50001 chr2L_50001 RAL-383 3 chr2L 47453 47479 chr2L 52565 52604 jockey 12 5121 6.5 6.5 6.5 1.6 5151 chr2L 47453 intron Cda5 - chr2L 50028 intron Cda5 - chr2L 52604 intron Cda5 - chr2L_12_50001 chr2L_50001 RAL-383 4 chr2L 54221 54249 chr2L 54323 54354 7 106 1.5 3.0 2.2 2.2 133 chr2L 54221 intron Cda5 - chr2L 54288 intron Cda5 - chr2L 54354 intron Cda5 - chr2L_7_50001 chr2L_50001 RAL-383 5 chr2L 63298 63325 chr2L 63419 63446 6 116 1.5 2.0 1.8 2.1 148 chr2L 63298 intron Cda5 - chr2L 63372 intron Cda5 - chr2L 63446 intron Cda5 - chr2L_6_60001 chr2L_60001 RAL-383 6 chr2L 89699 89743 chr2L 89796 89825 8 94 8.5 5.5 7.0 1.0 126 chr2L 89699 intergenic not near genes chr2L 89762 intergenic not near genes chr2L 89825 intergenic not near genes chr2L_8_85001 chr2L_85001 RAL-383 7 chr2L 129601 129638 chr2L 129739 129770 14 134 1.5 7.0 4.2 2.7 169 chr2L 129601 intron,intron CG11455 +,CG3164 - chr2L 129686 intron,intron CG11455 +,CG3164 - chr2L 129770 intron,intron CG11455 +,CG3164 - chr2L_14_125001 chr2L_125001 RAL-383 8 chr2L 164890 164913 chr2L 165024 165046 4 134 5.0 5.0 5.0 0.7 156 chr2L 164890 intron spen + chr2L 164968 intron spen + chr2L 165046 intron spen + chr2L_4_160001 chr2L_160001 RAL-383 9 chr2L 179460 179491 chr2L 179558 179594 8 99 1.0 6.5 3.8 1.7 134 chr2L 179460 intron spen + chr2L 179527 intron spen + chr2L 179594 intron spen + chr2L_8_175001 chr2L_175001 RAL-383 10 chr2L 231085 231136 chr2L 231382 231433 17 296 4.5 4.5 4.5 3.1 348 chr2L 231085 intron kis - chr2L 231259 intron kis - chr2L 231433 intron kis - chr2L_17_230001 chr2L_230001 RAL-383 11 chr2L 263282 263319 chr2L 263448 263485 10 166 0.0 2.5 1.2 4.5 203 chr2L 263282 intron,3` UTR CG3645 -,CG17075 - chr2L 263384 intron,3` UTR CG3645 -,CG17075 - chr2L 263485 intron,3` UTR CG3645 -,CG17075 - chr2L_10_260001 chr2L_260001 RAL-383 12 chr2L 347868 347917 chr2L 355388 355437 blood 12 7519 3.0 3.0 3.0 3.0 7569 chr2L 347868 3` UTR Plc21C + chr2L 351652 intron Plc21C + chr2L 355437 3` UTR Plc21C + chr2L_12_350001 chr2L_350001 RAL-383 13 chr2L 371423 371458 chr2L 371522 371557 10 98 3.5 2.5 3.0 2.5 134 chr2L 371423 intergenic not near genes chr2L 371490 intergenic not near genes chr2L 371557 intergenic not near genes chr2L_10_370001 chr2L_370001 RAL-383 14 chr2L 467339 467362 chr2L 467458 467481 10 118 11.5 11.0 11.2 0.8 142 chr2L 467339 intron CG4297 - chr2L 467410 intron CG4297 - chr2L 467481 intron CG4297 - chr2L_10_465001 chr2L_465001 RAL-383 15 chr2L 630312 630333 chr2L 630399 630434 8 102 2.5 3.0 2.8 2.1 122 chr2L 630312 intergenic not near genes chr2L 630373 intergenic not near genes chr2L 630434 intergenic not near genes chr2L_8_630001 chr2L_630001 RAL-383 16 chr2L 668414 668462 chr2L 668513 668545 14 96 6.0 1.5 3.8 2.9 131 chr2L 668414 intron ds - chr2L 668480 intron ds - chr2L 668545 intron ds - chr2L_14_665001 chr2L_665001 RAL-383 17 chr2L 686916 686937 chr2L 695976 695997 roo 5 9059 1.5 7.0 4.2 1.0 9081 chr2L 686916 intron ds - chr2L 691456 intron ds - chr2L 695997 intron ds - chr2L_5_690001 chr2L_690001 RAL-383 18 chr2L 718045 718082 chr2L 718138 718180 11 95 3.0 4.5 3.8 2.3 135 chr2L 718045 intergenic not near genes chr2L 718112 intergenic not near genes chr2L 718180 intergenic not near genes chr2L_11_715001 chr2L_715001 RAL-383 19 chr2L 740053 740083 chr2L 740154 740184 8 99 0.0 1.5 0.8 4.4 131 chr2L 740053 intron Eaat2 - chr2L 740118 intron Eaat2 - chr2L 740184 intron Eaat2 - chr2L_8_740001 chr2L_740001 RAL-383 20 chr2L 749593 749624 chr2L 749697 749729 7 102 4.0 6.5 5.2 1.1 136 chr2L 749593 intergenic GABA-B-R3 + chr2L 749661 intergenic GABA-B-R3 + chr2L 749729 intergenic GABA-B-R3 + chr2L_7_745001 chr2L_745001 RAL-383 21 chr2L 764551 764575 chr2L 764671 764695 6 120 3.0 3.0 3.0 1.5 144 chr2L 764551 intergenic not near genes chr2L 764623 intergenic not near genes chr2L 764695 intergenic not near genes chr2L_6_760001 chr2L_760001 RAL-383 22 chr2L 770461 770484 chr2L 772262 772285 Bari1 5 1801 3.0 3.5 3.2 1.2 1824 chr2L 770461 intergenic not near genes chr2L 771373 intergenic not near genes chr2L 772285 intergenic CR44614 + chr2L_5_770001 chr2L_770001 RAL-383 23 chr2L 791432 791469 chr2L 791546 791582 14 112 3.0 2.5 2.8 3.7 150 chr2L 791432 intergenic not near genes chr2L 791507 intergenic not near genes chr2L 791582 intergenic not near genes chr2L_14_790001 chr2L_790001 RAL-383 24 chr2L 877834 877878 chr2L 877932 877979 7 97 2.0 2.0 2.0 2.3 145 chr2L 877834 3` UTR,exon CG15824 -,ninaA + chr2L 877906 3` UTR,intron CG15824 -,ninaA + chr2L 877979 3` UTR,exon CG15824 -,ninaA + chr2L_7_875001 chr2L_875001 RAL-383 25 chr2L 906526 906574 chr2L 906628 906676 5 100 0.5 4.0 2.2 1.6 150 chr2L 906526 intergenic not near genes chr2L 906601 intergenic not near genes chr2L 906676 intergenic not near genes chr2L_5_905001 chr2L_905001 RAL-383 26 chr2L 922445 922493 chr2L 922546 922594 11 99 2.0 1.5 1.8 3.9 149 chr2L 922445 intergenic CG4341 + chr2L 922520 intergenic CG4341 + chr2L 922594 intergenic CG4341 + chr2L_11_920001 chr2L_920001 RAL-383 27 chr2L 928844 928859 chr2L 928915 928956 4 90 2.5 5.0 3.8 0.8 112 chr2L 928844 intron CG4341 + chr2L 928900 intron CG4341 + chr2L 928956 intron CG4341 + chr2L_4_925001 chr2L_925001 RAL-383 28 chr2L 976871 976906 chr2L 984527 984540 roo 6 7646 4.5 0.0 2.2 1.9 7669 chr2L 976871 intergenic not near genes chr2L 980706 intergenic not near genes chr2L 984540 intergenic not near genes chr2L_6_980001 chr2L_980001 RAL-383 29 chr2L 1039207 1039259 chr2L 1039312 1039349 8 98 0.5 0.5 0.5 5.3 142 chr2L 1039207 intron IA-2 - chr2L 1039278 intron IA-2 - chr2L 1039349 intron IA-2 - chr2L_8_1035001 chr2L_1035001 RAL-383 30 chr2L 1042589 1042600 chr2L 1042700 1042711 8 111 5.0 0.0 2.5 2.3 122 chr2L 1042589 intron IA-2 - chr2L 1042650 intron IA-2 - chr2L 1042711 intron IA-2 - chr2L_8_1040001 chr2L_1040001 RAL-383 31 chr2L 1073588 1073615 chr2L 1073677 1073724 10 103 5.5 4.0 4.8 1.7 136 chr2L 1073588 intron S - chr2L 1073656 intron S - chr2L 1073724 intron S - chr2L_10_1070001 chr2L_1070001 RAL-383 32 chr2L 1100380 1100405 chr2L 1100508 1100530 4 128 1.0 6.5 3.8 0.8 150 chr2L 1100380 intron CG4629 - chr2L 1100455 intron CG4629 - chr2L 1100530 intron CG4629 - chr2L_4_1100001 chr2L_1100001 RAL-383 33 chr2L 1142299 1142321 chr2L 1142536 1142557 8 236 1.0 4.0 2.5 2.3 258 chr2L 1142299 intergenic not near genes chr2L 1142428 intergenic CR45717 + chr2L 1142557 intergenic CR45717 + chr2L_8_1140001 chr2L_1140001 RAL-383 34 chr2L 1196803 1196847 chr2L 1196904 1196948 14 96 1.5 2.5 2.0 4.7 145 chr2L 1196803 3` UTR CG5001 + chr2L 1196876 intergenic CG5001 + chr2L 1196948 intergenic CG5001 + chr2L_14_1195001 chr2L_1195001 RAL-383 35 chr2L 1220111 1220161 chr2L 1227597 1227637 blood 21 7483 2.5 1.5 2.0 7.0 7526 chr2L 1220111 intron CG42329 + chr2L 1223874 intron CG42329 + chr2L 1227637 intron CG42329 + chr2L_21_1220001 chr2L_1220001 RAL-383 36 chr2L 1244398 1244437 chr2L 1244495 1244534 13 97 1.0 4.0 2.5 3.7 136 chr2L 1244398 intergenic not near genes chr2L 1244466 intergenic not near genes chr2L 1244534 intergenic not near genes chr2L_13_1240001 chr2L_1240001 RAL-383 37 chr2L 1261215 1261251 chr2L 1261316 1261350 7 101 5.0 3.0 4.0 1.4 135 chr2L 1261215 intron robo3 + chr2L 1261282 intron robo3 + chr2L 1261350 intron robo3 + chr2L_7_1260001 chr2L_1260001 RAL-383 38 chr2L 1282774 1282816 chr2L 1282888 1282930 8 112 3.5 3.5 3.5 1.8 156 chr2L 1282774 intron robo3 + chr2L 1282852 intron robo3 + chr2L 1282930 intron robo3 + chr2L_8_1280001 chr2L_1280001 RAL-383 39 chr2L 1301748 1301781 chr2L 1302304 1302358 gypsy 7 568 0.0 0.0 0.0 7.0 610 chr2L 1301748 intergenic not near genes chr2L 1302053 intergenic not near genes chr2L 1302358 intergenic not near genes chr2L_7_1300001 chr2L_1300001 RAL-383 40 chr2L 1410695 1410736 chr2L 1410799 1410842 12 106 3.0 4.0 3.5 2.7 147 chr2L 1410695 intron lea - chr2L 1410768 intron lea - chr2L 1410842 intron lea - chr2L_12_1410001 chr2L_1410001 RAL-383 41 chr2L 1471427 1471436 chr2L 1471520 1471536 5 99 4.5 6.0 5.2 0.8 109 chr2L 1471427 intergenic not near genes chr2L 1471482 intergenic not near genes chr2L 1471536 intergenic not near genes chr2L_5_1470001 chr2L_1470001 RAL-383 42 chr2L 1552654 1552670 chr2L 1552895 1552911 6 241 7.0 0.0 3.5 1.3 257 chr2L 1552654 intergenic not near genes chr2L 1552782 intergenic not near genes chr2L 1552911 intergenic not near genes chr2L_6_1550001 chr2L_1550001 RAL-383 43 chr2L 1556974 1557022 chr2L 1557087 1557088 13 108 3.5 6.5 5.0 2.2 114 chr2L 1556974 intron haf + chr2L 1557031 intron haf + chr2L 1557088 intron haf + chr2L_13_1555001 chr2L_1555001 RAL-383 44 chr2L 1570675 1570715 chr2L 1573567 1573607 F-element 5 2892 3.0 2.5 2.8 1.3 2932 chr2L 1570675 intron haf + chr2L 1572141 intron haf + chr2L 1573607 intron haf + chr2L_5_1570001 chr2L_1570001 RAL-383 45 chr2L 1607672 1607723 chr2L 1607771 1607822 13 90 1.0 3.0 2.0 4.3 150 chr2L 1607672 3` UTR,intron haf +,CG31935 - chr2L 1607747 3` UTR,intron haf +,CG31935 - chr2L 1607822 3` UTR,intron haf +,CG31935 - chr2L_13_1605001 chr2L_1605001 RAL-383 46 chr2L 1611181 1611211 chr2L 1611290 1611320 6 108 3.5 0.0 1.8 2.1 139 chr2L 1611181 intergenic CG31935 -,CG14352 + chr2L 1611250 intergenic CG31935 -,CG14352 + chr2L 1611320 intergenic CG14352 +,CG31935 - chr2L_6_1610001 chr2L_1610001 RAL-383 47 chr2L 1615381 1615414 chr2L 1615483 1615516 10 101 0.0 4.0 2.0 3.3 135 chr2L 1615381 intergenic not near genes chr2L 1615448 intergenic not near genes chr2L 1615516 intergenic not near genes chr2L_10_1615001 chr2L_1615001 RAL-383 48 chr2L 1678955 1679009 chr2L 1686440 1686494 blood 15 7483 1.5 6.5 4.0 3.0 7539 chr2L 1678955 intron chinmo + chr2L 1682724 intron chinmo + chr2L 1686494 intron chinmo + chr2L_15_1680001 chr2L_1680001 RAL-383 49 chr2L 1688091 1688108 chr2L 1688193 1688239 8 119 1.5 4.0 2.8 2.1 148 chr2L 1688091 intron chinmo + chr2L 1688165 intron chinmo + chr2L 1688239 intron chinmo + chr2L_8_1685001 chr2L_1685001 RAL-383 50 chr2L 1711336 1711388 chr2L 1711680 1711732 mdg3 10 340 6.5 4.0 5.2 1.6 396 chr2L 1711336 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711534 3` UTR frtz - chr2L 1711732 3` UTR frtz - chr2L_10_1710001 chr2L_1710001 RAL-383 51 chr2L 1724789 1724826 chr2L 1724891 1724928 14 101 6.5 2.5 4.5 2.5 139 chr2L 1724789 3` UTR Eno - chr2L 1724858 3` UTR Eno - chr2L 1724928 3` UTR Eno - chr2L_14_1720001 chr2L_1720001 RAL-383 52 chr2L 1750547 1750597 chr2L 1750646 1750696 11 99 1.5 1.5 1.5 4.4 149 chr2L 1750547 3` UTR CG17646 + chr2L 1750622 intergenic CG17646 +,CG17712 - chr2L 1750696 3` UTR CG17712 - chr2L_11_1750001 chr2L_1750001 RAL-383 53 chr2L 1828386 1828416 chr2L 1828490 1828520 7 102 5.0 1.0 3.0 1.8 134 chr2L 1828386 intergenic not near genes chr2L 1828453 intergenic not near genes chr2L 1828520 intergenic not near genes chr2L_7_1825001 chr2L_1825001 RAL-383 54 chr2L 1849307 1849337 chr2L 1849418 1849448 5 111 0.5 0.0 0.2 4.2 141 chr2L 1849307 intron wry + chr2L 1849378 intron wry + chr2L 1849448 intron wry + chr2L_5_1845001 chr2L_1845001 RAL-383 55 chr2L 1879559 1879571 chr2L 1879716 1879729 7 157 3.0 5.5 4.2 1.3 170 chr2L 1879559 intron CG31663 - chr2L 1879644 intron CG31663 - chr2L 1879729 intron CG31663 - chr2L_7_1875001 chr2L_1875001 RAL-383 56 chr2L 1925472 1925495 chr2L 1925569 1925590 8 96 4.5 4.5 4.5 1.5 118 chr2L 1925472 intron CG7337 + chr2L 1925531 intron CG7337 + chr2L 1925590 intron CG7337 + chr2L_8_1925001 chr2L_1925001 RAL-383 57 chr2L 1933641 1933684 chr2L 1933742 1933785 7 101 2.0 4.0 3.0 1.8 144 chr2L 1933641 intron CG7337 + chr2L 1933713 intron CG7337 + chr2L 1933785 intron CG7337 + chr2L_7_1930001 chr2L_1930001 RAL-383 58 chr2L 1958729 1958768 chr2L 1958825 1958865 10 96 7.0 4.0 5.5 1.5 136 chr2L 1958729 intron erm - chr2L 1958797 intron erm - chr2L 1958865 intron erm - chr2L_10_1955001 chr2L_1955001 RAL-383 59 chr2L 1993196 1993219 chr2L 1993287 1993287 10 99 2.0 4.0 3.0 2.5 91 chr2L 1993196 intergenic not near genes chr2L 1993242 intergenic not near genes chr2L 1993287 intergenic not near genes chr2L_10_1990001 chr2L_1990001 RAL-383 60 chr2L 2013391 2013401 chr2L 2013497 2013522 4 117 4.5 8.0 6.2 0.6 131 chr2L 2013391 intron CG4238 + chr2L 2013456 intron CG4238 + chr2L 2013522 intron CG4238 + chr2L_4_2010001 chr2L_2010001 RAL-383 61 chr2L 2025842 2025882 chr2L 2026122 2026163 9 280 0.0 3.0 1.5 3.6 321 chr2L 2025842 intron CG4238 + chr2L 2026002 intron CG4238 + chr2L 2026163 intron CG4238 + chr2L_9_2025001 chr2L_2025001 RAL-383 62 chr2L 2046306 2046352 chr2L 2046403 2046438 23 95 2.5 0.5 1.5 9.2 132 chr2L 2046306 intron Kebab + chr2L 2046372 intron Kebab + chr2L 2046438 exon Kebab + chr2L_23_2045001 chr2L_2045001 RAL-383 63 chr2L 2100377 2100401 chr2L 2109548 2109569 roo 6 9170 5.5 5.5 5.5 0.9 9192 chr2L 2100377 intron dpr3 - chr2L 2104973 intron dpr3 - chr2L 2109569 intron dpr3 - chr2L_6_2100001 chr2L_2100001 RAL-383 64 chr2L 2112112 2112137 chr2L 2119774 2119804 opus 5 7667 1.0 2.5 1.8 1.8 7692 chr2L 2112112 intergenic not near genes chr2L 2115958 intergenic not near genes chr2L 2119804 intergenic not near genes chr2L_5_2115001 chr2L_2115001 RAL-383 65 chr2L 2207652 2207685 chr2L 2207751 2207766 6 88 5.5 3.0 4.2 1.2 114 chr2L 2207652 exon CG33124 - chr2L 2207709 exon CG33124 - chr2L 2207766 exon CG33124 - chr2L_6_2205001 chr2L_2205001 RAL-383 66 chr2L 2250399 2250435 chr2L 2251186 2251217 6 786 8.5 0.0 4.2 1.2 818 chr2L 2250399 intergenic Ser12 - chr2L 2250808 exon Ser12 - chr2L 2251217 exon Ser12 - chr2L_6_2250001 chr2L_2250001 RAL-383 67 chr2L 2290568 2290616 chr2L 2290664 2290712 4 96 4.0 5.5 4.8 0.7 144 chr2L 2290568 exon robl22E - chr2L 2290640 5` UTR robl22E - chr2L 2290712 5` UTR robl22E - chr2L_4_2290001 chr2L_2290001 RAL-383 68 chr2L 2294058 2294075 chr2L 2299251 2299285 copia 5 5207 1.5 4.0 2.8 1.3 5227 chr2L 2294058 intergenic not near genes chr2L 2296672 intergenic not near genes chr2L 2299285 intergenic not near genes chr2L_5_2295001 chr2L_2295001 RAL-383 69 chr2L 2330858 2330901 chr2L 2330967 2331010 12 108 1.0 5.0 3.0 3.0 152 chr2L 2330858 intron,intron CG9967 -,eys + chr2L 2330934 intron,intron CG9967 -,eys + chr2L 2331010 intron,intron CG9967 -,eys + chr2L_12_2330001 chr2L_2330001 RAL-383 70 chr2L 2355290 2355304 chr2L 2355410 2355424 5 120 11.5 0.0 5.8 0.7 134 chr2L 2355290 intron,intron CG9967 -,eys + chr2L 2355357 intron,intron CG9967 -,eys + chr2L 2355424 intron,intron CG9967 -,eys + chr2L_5_2355001 chr2L_2355001 RAL-383 71 chr2L 2372345 2372402 chr2L 2372451 2372502 8 102 0.0 2.0 1.0 4.0 157 chr2L 2372345 intergenic CG3609 - chr2L 2372424 intergenic CG3609 - chr2L 2372502 3` UTR CG3609 - chr2L_8_2370001 chr2L_2370001 RAL-383 72 chr2L 2427390 2427400 chr2L 2427496 2427506 5 105 2.5 5.0 3.8 1.0 116 chr2L 2427390 3` UTR CR44912 - chr2L 2427448 3` UTR CR44912 - chr2L 2427506 3` UTR CR44912 - chr2L_5_2425001 chr2L_2425001 RAL-383 73 chr2L 2435321 2435332 chr2L 2435459 2435470 4 138 4.5 0.0 2.2 1.2 149 chr2L 2435321 intron dpp + chr2L 2435396 intron dpp + chr2L 2435470 intron dpp + chr2L_4_2435001 chr2L_2435001 RAL-383 74 chr2L 2541443 2541477 chr2L 2541546 2541577 5 102 0.5 1.0 0.8 2.8 134 chr2L 2541443 intergenic not near genes chr2L 2541510 intergenic not near genes chr2L 2541577 intergenic not near genes chr2L_5_2540001 chr2L_2540001 RAL-383 75 chr2L 2637209 2637259 chr2L 2637327 2637347 8 111 2.0 4.0 3.0 2.0 138 chr2L 2637209 intergenic not near genes chr2L 2637278 intergenic not near genes chr2L 2637347 intergenic not near genes chr2L_8_2635001 chr2L_2635001 RAL-383 76 chr2L 2667606 2667658 chr2L 2667705 2667713 12 85 5.5 4.0 4.8 2.1 107 chr2L 2667606 intergenic not near genes chr2L 2667660 intergenic not near genes chr2L 2667713 intergenic not near genes chr2L_12_2665001 chr2L_2665001 RAL-383 77 chr2L 2703428 2703443 chr2L 2703529 2703538 5 98 4.5 9.0 6.8 0.6 110 chr2L 2703428 intron CG31690 + chr2L 2703483 intron CG31690 + chr2L 2703538 intron CG31690 + chr2L_5_2700001 chr2L_2700001 RAL-383 78 chr2L 2772610 2772626 chr2L 2779203 2779218 297 5 6598 7.0 5.5 6.2 0.7 6608 chr2L 2772610 3` UTR Syt1 - chr2L 2775914 intron Syt1 - chr2L 2779218 3` UTR Syt1 - chr2L_5_2775001 chr2L_2775001 RAL-383 79 chr2L 2803987 2804027 chr2L 2804078 2804114 8 94 4.5 5.5 5.0 1.3 127 chr2L 2803987 intergenic not near genes chr2L 2804050 intergenic not near genes chr2L 2804114 intergenic not near genes chr2L_8_2800001 chr2L_2800001 RAL-383 80 chr2L 2831062 2831084 chr2L 2831188 2831198 6 122 5.5 0.0 2.8 1.6 136 chr2L 2831062 intergenic not near genes chr2L 2831130 intergenic not near genes chr2L 2831198 intergenic not near genes chr2L_6_2830001 chr2L_2830001 RAL-383 81 chr2L 2885353 2885394 chr2L 2885450 2885491 7 97 4.5 4.5 4.5 1.3 138 chr2L 2885353 intron NTPase - chr2L 2885422 intron NTPase - chr2L 2885491 intron NTPase - chr2L_7_2885001 chr2L_2885001 RAL-383 82 chr2L 2933283 2933319 chr2L 2935479 2935525 pogo 6 2194 3.5 5.5 4.5 1.1 2242 chr2L 2933283 intron lilli + chr2L 2934404 intron lilli + chr2L 2935525 intron lilli + chr2L_6_2930001 chr2L_2930001 RAL-383 83 chr2L 3016114 3016163 chr2L 3016212 3016261 8 95 1.0 2.5 1.8 2.9 147 chr2L 3016114 intergenic CG17265 +,CG17224 - chr2L 3016188 intergenic CG17265 +,CG17224 - chr2L 3016261 intergenic CG17224 -,CG17265 + chr2L_8_3015001 chr2L_3015001 RAL-383 84 chr2L 3049219 3049262 chr2L 3049325 3049368 15 106 6.5 3.5 5.0 2.5 149 chr2L 3049219 intron v(2)k05816 + chr2L 3049294 intron v(2)k05816 + chr2L 3049368 intron v(2)k05816 + chr2L_15_3045001 chr2L_3045001 RAL-383 85 chr2L 3072964 3072992 chr2L 3078233 3078261 copia 5 5269 5.0 3.0 4.0 1.0 5297 chr2L 3072964 intron toc - chr2L 3075612 intron toc - chr2L 3078261 intron toc - chr2L_5_3075001 chr2L_3075001 RAL-383 86 chr2L 3079084 3079109 chr2L 3079189 3079214 4 105 3.0 0.0 1.5 1.6 130 chr2L 3079084 intron toc - chr2L 3079149 intron toc - chr2L 3079214 intron toc - chr2L_4_3075001 chr2L_3075001 RAL-383 87 chr2L 3108867 3108890 chr2L 3108964 3108987 12 96 3.5 5.0 4.2 2.3 120 chr2L 3108867 intron toc - chr2L 3108927 intron toc - chr2L 3108987 intron toc - chr2L_12_3105001 chr2L_3105001 RAL-383 88 chr2L 3159693 3159700 chr2L 3159789 3159796 4 96 1.0 2.5 1.8 1.4 103 chr2L 3159693 intergenic Mad -,gkt + chr2L 3159744 intergenic Mad -,gkt + chr2L 3159796 intergenic Mad -,gkt + chr2L_4_3155001 chr2L_3155001 RAL-383 89 chr2L 3192188 3192235 chr2L 3192319 3192366 13 129 2.0 5.0 3.5 2.9 178 chr2L 3192188 exon CG34393 - chr2L 3192277 intron CG34393 - chr2L 3192366 intron CG34393 - chr2L_13_3190001 chr2L_3190001 RAL-383 90 chr2L 3233623 3233629 chr2L 3233794 3233800 5 171 3.5 5.0 4.2 1.0 177 chr2L 3233623 intergenic not near genes chr2L 3233712 intergenic not near genes chr2L 3233800 intergenic not near genes chr2L_5_3230001 chr2L_3230001 RAL-383 91 chr2L 3233630 3233659 chr2L 3233791 3233830 11 170 1.5 5.0 3.2 2.6 200 chr2L 3233630 intergenic not near genes chr2L 3233730 intergenic not near genes chr2L 3233830 intergenic not near genes chr2L_11_3230001 chr2L_3230001 RAL-383 92 chr2L 3251485 3251502 chr2L 3259070 3259087 springer 6 7584 8.5 7.5 8.0 0.7 7602 chr2L 3251485 intergenic not near genes chr2L 3255286 intergenic not near genes chr2L 3259087 intergenic not near genes chr2L_6_3255001 chr2L_3255001 RAL-383 93 chr2L 3262655 3262688 chr2L 3262871 3262904 8 214 1.0 0.5 0.8 4.4 249 chr2L 3262655 intergenic not near genes chr2L 3262780 intergenic not near genes chr2L 3262904 intergenic not near genes chr2L_8_3260001 chr2L_3260001 RAL-383 94 chr2L 3275176 3275207 chr2L 3275285 3275311 10 106 2.0 6.5 4.2 1.9 135 chr2L 3275176 intergenic not near genes chr2L 3275244 intergenic not near genes chr2L 3275311 intergenic CG3332 - chr2L_10_3275001 chr2L_3275001 RAL-383 95 chr2L 3291226 3291260 chr2L 3291326 3291342 12 97 6.5 5.0 5.8 1.8 116 chr2L 3291226 intergenic CG9664 - chr2L 3291284 3` UTR CG9664 - chr2L 3291342 3` UTR CG9664 - chr2L_12_3290001 chr2L_3290001 RAL-383 96 chr2L 3366995 3367038 chr2L 3367165 3367208 12 165 3.5 3.0 3.2 2.9 213 chr2L 3366995 intron CG34394 - chr2L 3367102 intron CG34394 - chr2L 3367208 intron CG34394 - chr2L_12_3365001 chr2L_3365001 RAL-383 97 chr2L 3388582 3388628 chr2L 3388843 3388889 pogo 16 260 3.5 2.0 2.8 4.2 307 chr2L 3388582 intergenic CG42460 - chr2L 3388736 intergenic CG42460 - chr2L 3388889 intergenic CG42460 -,CR44791 + chr2L_16_3385001 chr2L_3385001 RAL-383 98 chr2L 3426388 3426438 chr2L 3426521 3426571 17 132 3.5 4.5 4.0 3.4 183 chr2L 3426388 intron pgant2 - chr2L 3426480 intron pgant2 - chr2L 3426571 5` UTR pgant2 - chr2L_17_3425001 chr2L_3425001 RAL-383 99 chr2L 3437137 3437161 chr2L 3437240 3437264 14 102 3.0 1.5 2.2 4.4 127 chr2L 3437137 intergenic not near genes chr2L 3437200 intergenic not near genes chr2L 3437264 intergenic not near genes chr2L_14_3435001 chr2L_3435001 RAL-383 100 chr2L 3439424 3439455 chr2L 3439515 3439562 13 98 1.0 3.0 2.0 4.3 138 chr2L 3439424 intergenic not near genes chr2L 3439493 intergenic not near genes chr2L 3439562 intergenic not near genes chr2L_13_3435001 chr2L_3435001 RAL-383 101 chr2L 3510382 3510412 chr2L 3510484 3510514 11 101 6.5 6.5 6.5 1.5 132 chr2L 3510382 3` UTR CG33123 - chr2L 3510448 3` UTR CG33123 - chr2L 3510514 3` UTR CG33123 - chr2L_11_3510001 chr2L_3510001 RAL-383 102 chr2L 3632245 3632274 chr2L 3632342 3632371 5 96 0.0 9.5 4.8 0.9 126 chr2L 3632245 intron for - chr2L 3632308 intron for - chr2L 3632371 intron for - chr2L_5_3630001 chr2L_3630001 RAL-383 103 chr2L 3649783 3649788 chr2L 3655005 3655010 copia 4 5222 0.0 7.5 3.8 0.8 5227 chr2L 3649783 intron for - chr2L 3652396 intron for - chr2L 3655010 intron for - chr2L_4_3650001 chr2L_3650001 RAL-383 104 chr2L 3663296 3663339 chr2L 3663395 3663438 16 98 4.5 5.0 4.8 2.8 142 chr2L 3663296 5` UTR CG34340 + chr2L 3663367 intron CG34340 + chr2L 3663438 intron CG34340 + chr2L_16_3660001 chr2L_3660001 RAL-383 105 chr2L 3667950 3668063 chr2L 3668051 3668153 10 101 0.0 0.0 0.0 10.0 203 chr2L 3667950 intron CG34340 + chr2L 3668052 intron,3` UTR CG34340 +,Sfp24Ba - chr2L 3668153 intron,exon CG34340 +,Sfp24Ba - chr2L_10_3665001 chr2L_3665001 RAL-383 106 chr2L 3712135 3712153 chr2L 3712278 3712296 4 142 4.0 6.5 5.2 0.6 161 chr2L 3712135 intron CG31955 - chr2L 3712216 intron CG31955 - chr2L 3712296 exon CG31955 - chr2L_4_3710001 chr2L_3710001 RAL-383 107 chr2L 3789041 3789072 chr2L 3789143 3789174 10 102 5.0 5.5 5.2 1.6 133 chr2L 3789041 intron CG3921 + chr2L 3789108 intron CG3921 + chr2L 3789174 intron CG3921 + chr2L_10_3785001 chr2L_3785001 RAL-383 108 chr2L 3885494 3885504 chr2L 3885582 3885617 5 102 2.5 1.5 2.0 1.7 123 chr2L 3885494 intron capu - chr2L 3885556 intron capu - chr2L 3885617 intron capu - chr2L_5_3885001 chr2L_3885001 RAL-383 109 chr2L 3927241 3927289 chr2L 3927342 3927390 11 101 3.0 0.0 1.5 4.4 149 chr2L 3927241 intron fred - chr2L 3927316 intron fred - chr2L 3927390 intron fred - chr2L_11_3925001 chr2L_3925001 RAL-383 110 chr2L 3936637 3936642 chr2L 3936737 3936742 4 100 4.0 4.5 4.2 0.8 105 chr2L 3936637 intron fred - chr2L 3936690 intron fred - chr2L 3936742 intron fred - chr2L_4_3935001 chr2L_3935001 RAL-383 111 chr2L 3943781 3943827 chr2L 3943886 3943938 17 110 3.5 5.0 4.2 3.3 157 chr2L 3943781 intron fred - chr2L 3943860 intron fred - chr2L 3943938 intron fred - chr2L_17_3940001 chr2L_3940001 RAL-383 112 chr2L 3985974 3985982 chr2L 3986072 3986080 4 98 3.0 8.5 5.8 0.6 106 chr2L 3985974 intron fred - chr2L 3986027 intron fred - chr2L 3986080 intron fred - chr2L_4_3985001 chr2L_3985001 RAL-383 113 chr2L 4001651 4001688 chr2L 4001768 4001806 9 118 1.0 2.0 1.5 3.6 155 chr2L 4001651 intergenic CR45344 + chr2L 4001728 intergenic CR45344 + chr2L 4001806 intergenic CR45344 + chr2L_9_4000001 chr2L_4000001 RAL-383 114 chr2L 4044474 4044495 chr2L 4044709 4044749 9 249 2.5 4.5 3.5 2.0 275 chr2L 4044474 intron ed + chr2L 4044612 intron ed + chr2L 4044749 intron ed + chr2L_9_4040001 chr2L_4040001 RAL-383 115 chr2L 4054537 4054574 chr2L 4054646 4054683 12 109 2.5 7.0 4.8 2.1 146 chr2L 4054537 intron ed + chr2L 4054610 intron ed + chr2L 4054683 intron ed + chr2L_12_4050001 chr2L_4050001 RAL-383 116 chr2L 4060177 4060199 chr2L 4060260 4060295 8 89 1.5 3.0 2.2 2.5 118 chr2L 4060177 intron ed + chr2L 4060236 intron ed + chr2L 4060295 intron ed + chr2L_8_4060001 chr2L_4060001 RAL-383 117 chr2L 4072321 4072339 chr2L 4072431 4072449 4 110 1.0 3.5 2.2 1.2 128 chr2L 4072321 intron ed + chr2L 4072385 intron ed + chr2L 4072449 intron ed + chr2L_4_4070001 chr2L_4070001 RAL-383 118 chr2L 4159396 4159420 chr2L 4159616 4159640 7 219 4.5 2.5 3.5 1.6 244 chr2L 4159396 intergenic not near genes chr2L 4159518 intergenic not near genes chr2L 4159640 intergenic not near genes chr2L_7_4155001 chr2L_4155001 RAL-383 119 chr2L 4166358 4166404 chr2L 4166461 4166507 9 102 2.0 2.5 2.2 2.8 149 chr2L 4166358 intergenic Or24a - chr2L 4166432 intergenic Or24a - chr2L 4166507 intergenic Or24a - chr2L_9_4165001 chr2L_4165001 RAL-383 120 chr2L 4180113 4180118 chr2L 4180209 4180214 6 96 4.0 2.5 3.2 1.4 101 chr2L 4180113 intergenic not near genes chr2L 4180164 intergenic not near genes chr2L 4180214 intergenic not near genes chr2L_6_4180001 chr2L_4180001 RAL-383 121 chr2L 4181292 4181302 chr2L 4183944 4183953 Burdock 4 2652 6.0 7.0 6.5 0.5 2661 chr2L 4181292 intergenic not near genes chr2L 4182622 intergenic not near genes chr2L 4183953 intergenic not near genes chr2L_4_4180001 chr2L_4180001 RAL-383 122 chr2L 4184452 4184506 chr2L 4184791 4184845 6 335 1.0 3.0 2.0 2.0 393 chr2L 4184452 intergenic not near genes chr2L 4184648 intergenic not near genes chr2L 4184845 intergenic not near genes chr2L_6_4180001 chr2L_4180001 RAL-383 123 chr2L 4224392 4224421 chr2L 4224491 4224514 6 98 1.5 5.5 3.5 1.3 122 chr2L 4224392 intergenic CG3702 - chr2L 4224453 intergenic CG3702 - chr2L 4224514 intergenic CG3702 - chr2L_6_4220001 chr2L_4220001 RAL-383 124 chr2L 4325620 4325634 chr2L 4325829 4325843 6 209 0.5 3.5 2.0 2.0 223 chr2L 4325620 intron CG16857 + chr2L 4325732 intron CG16857 + chr2L 4325843 intron CG16857 + chr2L_6_4325001 chr2L_4325001 RAL-383 125 chr2L 4345472 4345513 chr2L 4345570 4345611 7 98 2.5 4.0 3.2 1.7 139 chr2L 4345472 3` UTR Atet + chr2L 4345542 3` UTR Atet + chr2L 4345611 3` UTR Atet + chr2L_7_4345001 chr2L_4345001 RAL-383 126 chr2L 4411275 4411308 chr2L 4411374 4411407 12 99 1.5 4.5 3.0 3.0 132 chr2L 4411275 intron,intron CG15431 -,CG43055 + chr2L 4411341 intron,exon CG15431 -,CG43055 + chr2L 4411407 intron,exon CG15431 -,CG43055 + chr2L_12_4410001 chr2L_4410001 RAL-383 127 chr2L 4534491 4534502 chr2L 4536726 4536736 4 2234 25.0 102.0 63.5 0.1 2245 chr2L 4534491 exon dp - chr2L 4535614 exon dp - chr2L 4536736 exon dp - chr2L_4_4535001 chr2L_4535001 RAL-383 128 chr2L 4582504 4582538 chr2L 4582593 4582644 5 99 1.0 1.0 1.0 2.5 140 chr2L 4582504 intron,3` UTR dp -,CR43716 - chr2L 4582574 intron,3` UTR dp -,CR43716 - chr2L 4582644 intron,3` UTR dp -,CR43716 - chr2L_5_4580001 chr2L_4580001 RAL-383 129 chr2L 4586961 4586996 chr2L 4587063 4587085 11 108 0.5 4.5 2.5 3.1 124 chr2L 4586961 intron dp - chr2L 4587023 intron dp - chr2L 4587085 intron dp - chr2L_11_4585001 chr2L_4585001 RAL-383 130 chr2L 4595844 4595888 chr2L 4595954 4595998 6 108 6.0 0.5 3.2 1.4 154 chr2L 4595844 intron dp - chr2L 4595921 intron dp - chr2L 4595998 intron dp - chr2L_6_4595001 chr2L_4595001 RAL-383 131 chr2L 4601688 4601723 chr2L 4609149 4609184 mdg1 16 7460 4.5 6.0 5.2 2.6 7496 chr2L 4601688 intron dp - chr2L 4605436 intron dp - chr2L 4609184 intron dp - chr2L_16_4605001 chr2L_4605001 RAL-383 132 chr2L 4601724 4601736 chr2L 4609148 4609197 mdg1 5 7454 3.5 6.0 4.8 0.9 7473 chr2L 4601724 intron dp - chr2L 4605460 intron dp - chr2L 4609197 intron dp - chr2L_5_4605001 chr2L_4605001 RAL-383 133 chr2L 4630641 4630673 chr2L 4630759 4630761 4 108 3.0 3.5 3.2 1.0 120 chr2L 4630641 intergenic not near genes chr2L 4630701 intergenic not near genes chr2L 4630761 intergenic not near genes chr2L_4_4630001 chr2L_4630001 RAL-383 134 chr2L 4693387 4693419 chr2L 4693574 4693606 14 187 4.5 2.5 3.5 3.1 219 chr2L 4693387 intergenic not near genes chr2L 4693496 intergenic not near genes chr2L 4693606 intergenic not near genes chr2L_14_4690001 chr2L_4690001 RAL-383 135 chr2L 4707102 4707151 chr2L 4707211 4707260 7 102 3.5 0.5 2.0 2.3 158 chr2L 4707102 intron CG34351 + chr2L 4707181 intron CG34351 + chr2L 4707260 intron CG34351 + chr2L_7_4705001 chr2L_4705001 RAL-383 136 chr2L 4740091 4740112 chr2L 4740172 4740211 5 87 4.5 4.0 4.2 1.0 120 chr2L 4740091 intron CG15630 - chr2L 4740151 intron CG15630 - chr2L 4740211 intron CG15630 - chr2L_5_4740001 chr2L_4740001 RAL-383 137 chr2L 4747538 4747555 chr2L 4747756 4747772 6 220 2.0 1.5 1.8 2.1 234 chr2L 4747538 intron CG15630 - chr2L 4747655 intron CG15630 - chr2L 4747772 intron CG15630 - chr2L_6_4745001 chr2L_4745001 RAL-383 138 chr2L 4753778 4753790 chr2L 4753884 4753894 5 107 0.5 6.5 3.5 1.1 116 chr2L 4753778 intron CG15630 - chr2L 4753836 intron CG15630 - chr2L 4753894 intron CG15630 - chr2L_5_4750001 chr2L_4750001 RAL-383 139 chr2L 4855278 4855328 chr2L 4855383 4855425 4 103 1.5 4.5 3.0 1.0 147 chr2L 4855278 intron pog + chr2L 4855352 intron pog + chr2L 4855425 intron pog + chr2L_4_4855001 chr2L_4855001 RAL-383 140 chr2L 4858450 4858480 chr2L 4858569 4858599 8 119 1.0 7.0 4.0 1.6 149 chr2L 4858450 intron pog + chr2L 4858524 intron pog + chr2L 4858599 intron pog + chr2L_8_4855001 chr2L_4855001 RAL-383 141 chr2L 4923235 4923246 chr2L 4923345 4923357 5 111 0.0 6.5 3.2 1.2 122 chr2L 4923235 intron hoe1 - chr2L 4923296 intron hoe1 - chr2L 4923357 intron hoe1 - chr2L_5_4920001 chr2L_4920001 RAL-383 142 chr2L 4996077 4996113 chr2L 4996174 4996199 12 96 3.5 4.5 4.0 2.4 122 chr2L 4996077 intron Rtnl1 - chr2L 4996138 intron Rtnl1 - chr2L 4996199 intron Rtnl1 - chr2L_12_4995001 chr2L_4995001 RAL-383 143 chr2L 5021716 5021723 chr2L 5021812 5021819 4 95 3.5 6.0 4.8 0.7 103 chr2L 5021716 intron vkg - chr2L 5021768 intron vkg - chr2L 5021819 intron vkg - chr2L_4_5020001 chr2L_5020001 RAL-383 144 chr2L 5038000 5038029 chr2L 5038099 5038133 9 98 1.0 4.5 2.8 2.4 133 chr2L 5038000 5` UTR,5` UTR CG14042 +,SP555 + chr2L 5038066 5` UTR,5` UTR CG14042 +,SP555 + chr2L 5038133 exon,5` UTR CG14042 +,SP555 + chr2L_9_5035001 chr2L_5035001 RAL-383 145 chr2L 5092393 5092437 chr2L 5092498 5092544 5 107 0.0 3.5 1.8 1.8 151 chr2L 5092393 intron pgant5 - chr2L 5092468 intron pgant5 - chr2L 5092544 intron pgant5 - chr2L_5_5090001 chr2L_5090001 RAL-383 146 chr2L 5240984 5240990 chr2L 5241085 5241091 4 101 0.0 0.5 0.2 3.3 107 chr2L 5240984 intron tkv - chr2L 5241038 intron tkv - chr2L 5241091 intron tkv - chr2L_4_5240001 chr2L_5240001 RAL-383 147 chr2L 5276704 5276734 chr2L 5276808 5276838 9 104 0.5 5.5 3.0 2.2 134 chr2L 5276704 exon Bsg25D - chr2L 5276771 intron Bsg25D - chr2L 5276838 intron Bsg25D - chr2L_9_5275001 chr2L_5275001 RAL-383 148 chr2L 5345424 5345458 chr2L 5345519 5345554 10 88 2.5 7.0 4.8 1.7 130 chr2L 5345424 intergenic not near genes chr2L 5345489 intergenic not near genes chr2L 5345554 intergenic not near genes chr2L_10_5345001 chr2L_5345001 RAL-383 149 chr2L 5375151 5375161 chr2L 5375247 5375257 8 95 2.0 2.5 2.2 2.5 106 chr2L 5375151 intergenic not near genes chr2L 5375204 intergenic not near genes chr2L 5375257 intergenic not near genes chr2L_8_5375001 chr2L_5375001 RAL-383 150 chr2L 5378417 5378452 chr2L 5378516 5378551 7 99 7.0 4.5 5.8 1.0 134 chr2L 5378417 intergenic not near genes chr2L 5378484 intergenic not near genes chr2L 5378551 intergenic not near genes chr2L_7_5375001 chr2L_5375001 RAL-383 151 chr2L 5475135 5475162 chr2L 5475260 5475287 8 125 2.5 3.0 2.8 2.1 152 chr2L 5475135 intergenic not near genes chr2L 5475211 intergenic not near genes chr2L 5475287 intergenic not near genes chr2L_8_5475001 chr2L_5475001 RAL-383 152 chr2L 5485034 5485075 chr2L 5485134 5485168 8 97 4.0 1.5 2.8 2.1 134 chr2L 5485034 intergenic not near genes chr2L 5485101 intergenic not near genes chr2L 5485168 intergenic not near genes chr2L_8_5485001 chr2L_5485001 RAL-383 153 chr2L 5486270 5486289 chr2L 5486378 5486398 5 109 1.0 0.5 0.8 2.8 128 chr2L 5486270 intergenic not near genes chr2L 5486334 intergenic not near genes chr2L 5486398 intergenic not near genes chr2L_5_5485001 chr2L_5485001 RAL-383 154 chr2L 5500042 5500076 chr2L 5500148 5500177 8 101 4.5 3.0 3.8 1.7 135 chr2L 5500042 intergenic not near genes chr2L 5500110 intergenic not near genes chr2L 5500177 intergenic not near genes chr2L_8_5500001 chr2L_5500001 RAL-383 155 chr2L 5582306 5582347 chr2L 5582416 5582457 11 109 3.5 4.0 3.8 2.3 151 chr2L 5582306 intergenic not near genes chr2L 5582382 intergenic not near genes chr2L 5582457 intergenic not near genes chr2L_11_5580001 chr2L_5580001 RAL-383 156 chr2L 5594305 5594359 chr2L 5594417 5594466 8 110 4.0 0.0 2.0 2.7 161 chr2L 5594305 intergenic not near genes chr2L 5594386 intergenic not near genes chr2L 5594466 intergenic not near genes chr2L_8_5590001 chr2L_5590001 RAL-383 157 chr2L 5666282 5666322 chr2L 5666381 5666432 7 107 5.5 1.5 3.5 1.6 150 chr2L 5666282 intron Hsp60C + chr2L 5666357 intron Hsp60C + chr2L 5666432 intron Hsp60C + chr2L_7_5665001 chr2L_5665001 RAL-383 158 chr2L 5709036 5709086 chr2L 5709215 5709265 14 174 3.5 4.0 3.8 2.9 229 chr2L 5709036 intron CG7236 + chr2L 5709150 intron CG7236 + chr2L 5709265 intron CG7236 + chr2L_14_5705001 chr2L_5705001 RAL-383 159 chr2L 5774571 5774619 chr2L 5774805 5774852 5 223 4.0 1.5 2.8 1.3 281 chr2L 5774571 intron CG9171 - chr2L 5774712 intron CG9171 - chr2L 5774852 intron CG9171 - chr2L_5_5770001 chr2L_5770001 RAL-383 160 chr2L 5784932 5784978 chr2L 5785035 5785081 15 103 4.5 3.5 4.0 3.0 149 chr2L 5784932 intron CG9171 - chr2L 5785006 intron CG9171 - chr2L 5785081 intron CG9171 - chr2L_15_5785001 chr2L_5785001 RAL-383 161 chr2L 5827404 5827441 chr2L 5827522 5827559 8 117 7.5 6.5 7.0 1.0 155 chr2L 5827404 intron TrissinR + chr2L 5827482 intron TrissinR + chr2L 5827559 intron TrissinR + chr2L_8_5825001 chr2L_5825001 RAL-383 162 chr2L 5839083 5839125 chr2L 5839172 5839199 9 88 2.5 0.0 1.2 4.1 116 chr2L 5839083 intron TrissinR + chr2L 5839141 intron TrissinR + chr2L 5839199 intron TrissinR + chr2L_9_5835001 chr2L_5835001 RAL-383 163 chr2L 5842313 5842333 chr2L 5842417 5842417 5 100 2.5 0.0 1.2 2.3 104 chr2L 5842313 intron TrissinR + chr2L 5842365 intron TrissinR + chr2L 5842417 intron TrissinR + chr2L_5_5840001 chr2L_5840001 RAL-383 164 chr2L 5870454 5870505 chr2L 5870550 5870593 11 94 4.0 3.0 3.5 2.4 139 chr2L 5870454 intron rau - chr2L 5870524 intron rau - chr2L 5870593 intron rau - chr2L_11_5870001 chr2L_5870001 RAL-383 165 chr2L 5887585 5887610 chr2L 5887686 5887710 7 99 8.5 4.5 6.5 0.9 125 chr2L 5887585 3` UTR CR44577 - chr2L 5887648 3` UTR CR44577 - chr2L 5887710 3` UTR CR44577 - chr2L_7_5885001 chr2L_5885001 RAL-383 166 chr2L 5887617 5887634 chr2L 5887684 5887735 7 96 3.5 4.5 4.0 1.4 118 chr2L 5887617 3` UTR CR44577 - chr2L 5887676 3` UTR CR44577 - chr2L 5887735 3` UTR CR44577 - chr2L_7_5885001 chr2L_5885001 RAL-383 167 chr2L 5926251 5926455 chr2L 5926349 5926563 6 134 0.0 0.0 0.0 6.0 312 chr2L 5926251 intron dsf + chr2L 5926407 intron dsf + chr2L 5926563 intron dsf + chr2L_6_5925001 chr2L_5925001 RAL-383 168 chr2L 5976929 5976968 chr2L 5977035 5977074 7 105 3.5 0.5 2.0 2.3 145 chr2L 5976929 intron chic - chr2L 5977002 intron chic - chr2L 5977074 intron chic - chr2L_7_5975001 chr2L_5975001 RAL-383 169 chr2L 5989023 5989063 chr2L 5989109 5989111 15 92 3.5 0.0 1.8 5.4 88 chr2L 5989023 intergenic ifc +,lid - chr2L 5989067 intergenic ifc +,lid - chr2L 5989111 intergenic ifc +,lid - chr2L_15_5985001 chr2L_5985001 RAL-383 170 chr2L 6011337 6011379 chr2L 6011497 6011539 13 160 4.5 3.5 4.0 2.6 202 chr2L 6011337 intron CG9098 - chr2L 6011438 intron CG9098 - chr2L 6011539 intron CG9098 - chr2L_13_6010001 chr2L_6010001 RAL-383 171 chr2L 6074426 6074447 chr2L 6074554 6074591 9 141 3.0 6.0 4.5 1.6 165 chr2L 6074426 3` UTR CR43801 - chr2L 6074508 3` UTR CR43801 - chr2L 6074591 3` UTR CR43801 - chr2L_9_6070001 chr2L_6070001 RAL-383 172 chr2L 6103201 6103252 chr2L 6103295 6103344 11 92 2.0 2.0 2.0 3.7 143 chr2L 6103201 intron stai + chr2L 6103272 intron stai + chr2L 6103344 intron stai + chr2L_11_6100001 chr2L_6100001 RAL-383 173 chr2L 6106229 6106243 chr2L 6106331 6106346 4 103 6.0 3.0 4.5 0.7 117 chr2L 6106229 intron stai + chr2L 6106288 intron stai + chr2L 6106346 intron stai + chr2L_4_6105001 chr2L_6105001 RAL-383 174 chr2L 6173846 6173866 chr2L 6173942 6173962 9 96 7.5 3.0 5.2 1.5 116 chr2L 6173846 intergenic not near genes chr2L 6173904 intergenic not near genes chr2L 6173962 intergenic not near genes chr2L_9_6170001 chr2L_6170001 RAL-383 175 chr2L 6173867 6173881 chr2L 6173939 6173977 9 92 4.5 3.0 3.8 1.9 110 chr2L 6173867 intergenic not near genes chr2L 6173922 intergenic not near genes chr2L 6173977 intergenic not near genes chr2L_9_6170001 chr2L_6170001 RAL-383 176 chr2L 6242857 6242881 chr2L 6242961 6242967 8 102 3.0 0.0 1.5 3.2 110 chr2L 6242857 intergenic not near genes chr2L 6242912 intergenic not near genes chr2L 6242967 intergenic not near genes chr2L_8_6240001 chr2L_6240001 RAL-383 177 chr2L 6312357 6312363 chr2L 6312454 6312460 4 97 0.0 8.0 4.0 0.8 103 chr2L 6312357 intron Ddr + chr2L 6312408 intron Ddr + chr2L 6312460 intron Ddr + chr2L_4_6310001 chr2L_6310001 RAL-383 178 chr2L 6318719 6318730 chr2L 6318893 6318904 4 174 7.0 4.0 5.5 0.6 185 chr2L 6318719 intron Ddr + chr2L 6318812 intron Ddr + chr2L 6318904 intron Ddr + chr2L_4_6315001 chr2L_6315001 RAL-383 179 chr2L 6318731 6318764 chr2L 6318889 6318938 14 170 2.0 3.5 2.8 3.7 207 chr2L 6318731 intron Ddr + chr2L 6318834 intron Ddr + chr2L 6318938 intron Ddr + chr2L_14_6315001 chr2L_6315001 RAL-383 180 chr2L 6363131 6363179 chr2L 6366073 6366120 Burdock 13 2935 8.0 2.5 5.2 2.1 2989 chr2L 6363131 intergenic not near genes chr2L 6364626 intergenic not near genes chr2L 6366120 intergenic not near genes chr2L_13_6360001 chr2L_6360001 RAL-383 181 chr2L 6414730 6414772 chr2L 6414830 6414872 8 99 8.0 2.5 5.2 1.3 142 chr2L 6414730 3` UTR CG13982 + chr2L 6414801 3` UTR CG13982 + chr2L 6414872 3` UTR CG13982 + chr2L_8_6410001 chr2L_6410001 RAL-383 182 chr2L 6426834 6426886 chr2L 6445114 6445157 roo 18 18277 5.0 3.5 4.2 3.5 18323 chr2L 6426834 3` UTR CG9527 - chr2L 6435996 intron CG9527 - chr2L 6445157 exon CG9527 - chr2L_18_6435001 chr2L_6435001 RAL-383 183 chr2L 6537127 6537133 chr2L 6537225 6537231 4 98 7.0 3.5 5.2 0.6 104 chr2L 6537127 intron eya - chr2L 6537179 intron eya - chr2L 6537231 intron eya - chr2L_4_6535001 chr2L_6535001 RAL-383 184 chr2L 6564832 6564881 chr2L 6564936 6564993 8 108 3.5 2.0 2.8 2.1 161 chr2L 6564832 3` UTR CG13766 - chr2L 6564912 3` UTR CG13766 - chr2L 6564993 3` UTR CG13766 - chr2L_8_6560001 chr2L_6560001 RAL-383 185 chr2L 6597247 6597269 chr2L 6597382 6597404 7 133 5.0 1.0 3.0 1.8 157 chr2L 6597247 intron CG11319 - chr2L 6597326 intron CG11319 - chr2L 6597404 intron CG11319 - chr2L_7_6595001 chr2L_6595001 RAL-383 186 chr2L 6655516 6655540 chr2L 6655892 6655899 4 371 3.5 7.5 5.5 0.6 383 chr2L 6655516 exon CG31633 - chr2L 6655708 exon CG31633 - chr2L 6655899 exon CG31633 - chr2L_4_6655001 chr2L_6655001 RAL-383 187 chr2L 6771587 6771595 chr2L 6771704 6771712 4 117 3.0 0.0 1.5 1.6 125 chr2L 6771587 intron CG11321 - chr2L 6771650 intron CG11321 - chr2L 6771712 intron CG11321 - chr2L_4_6770001 chr2L_6770001 RAL-383 188 chr2L 6839708 6839730 chr2L 6839821 6839843 8 113 6.5 4.0 5.2 1.3 135 chr2L 6839708 intergenic not near genes chr2L 6839776 intergenic not near genes chr2L 6839843 intergenic not near genes chr2L_8_6835001 chr2L_6835001 RAL-383 189 chr2L 6850374 6850423 chr2L 6850500 6850548 10 126 6.0 3.0 4.5 1.8 174 chr2L 6850374 intergenic not near genes chr2L 6850461 intergenic not near genes chr2L 6850548 intergenic not near genes chr2L_10_6850001 chr2L_6850001 RAL-383 190 chr2L 6883746 6883776 chr2L 6883852 6883882 6 103 2.5 8.0 5.2 1.0 136 chr2L 6883746 intron Nlg2 + chr2L 6883814 intron Nlg2 + chr2L 6883882 intron Nlg2 + chr2L_6_6880001 chr2L_6880001 RAL-383 191 chr2L 6887480 6887527 chr2L 6887650 6887699 5 170 3.0 0.0 1.5 2.0 219 chr2L 6887480 intron Nlg2 + chr2L 6887590 intron Nlg2 + chr2L 6887699 intron Nlg2 + chr2L_5_6885001 chr2L_6885001 RAL-383 192 chr2L 6972215 6972260 chr2L 6972655 6972691 4 426 0.0 0.0 0.0 4.0 476 chr2L 6972215 intergenic snRNP-U1-70K - chr2L 6972453 intergenic uif - chr2L 6972691 intergenic uif - chr2L_4_6970001 chr2L_6970001 RAL-383 193 chr2L 6991409 6991436 chr2L 6998550 6998572 HMS-Beagle 4 7140 6.0 4.0 5.0 0.7 7163 chr2L 6991409 intron uif - chr2L 6994990 intron uif - chr2L 6998572 intron uif - chr2L_4_6990001 chr2L_6990001 RAL-383 194 chr2L 7095593 7095617 chr2L 7095703 7095727 8 110 3.5 2.0 2.8 2.1 134 chr2L 7095593 intergenic not near genes chr2L 7095660 intergenic not near genes chr2L 7095727 intergenic not near genes chr2L_8_7095001 chr2L_7095001 RAL-383 195 chr2L 7122859 7122883 chr2L 7122948 7122983 6 92 1.5 7.0 4.2 1.2 124 chr2L 7122859 intron Pvf3 - chr2L 7122921 intron Pvf3 - chr2L 7122983 intron Pvf3 - chr2L_6_7120001 chr2L_7120001 RAL-383 196 chr2L 7125772 7125793 chr2L 7125908 7125929 8 135 8.5 3.5 6.0 1.1 157 chr2L 7125772 intron Pvf3 - chr2L 7125850 intron Pvf3 - chr2L 7125929 intron Pvf3 - chr2L_8_7125001 chr2L_7125001 RAL-383 197 chr2L 7143146 7143184 chr2L 7143247 7143285 10 101 2.0 6.0 4.0 2.0 139 chr2L 7143146 intron,5` UTR Pvf3 -,CR44612 + chr2L 7143216 intron,5` UTR Pvf3 -,CR44612 + chr2L 7143285 intron,5` UTR Pvf3 -,CR44612 + chr2L_10_7140001 chr2L_7140001 RAL-383 198 chr2L 7149980 7150010 chr2L 7150100 7150130 6 119 1.5 4.5 3.0 1.5 150 chr2L 7149980 intron Pvf3 - chr2L 7150055 intron Pvf3 - chr2L 7150130 intron Pvf3 - chr2L_6_7150001 chr2L_7150001 RAL-383 199 chr2L 7152179 7152196 chr2L 7152281 7152298 5 102 7.0 2.5 4.8 0.9 119 chr2L 7152179 intron Pvf3 - chr2L 7152238 intron Pvf3 - chr2L 7152298 intron Pvf3 - chr2L_5_7150001 chr2L_7150001 RAL-383 200 chr2L 7164548 7164581 chr2L 7164686 7164719 13 137 4.0 6.5 5.2 2.1 171 chr2L 7164548 intergenic not near genes chr2L 7164634 intergenic not near genes chr2L 7164719 intergenic not near genes chr2L_13_7160001 chr2L_7160001 RAL-383 201 chr2L 7200988 7201033 chr2L 7201082 7201134 17 99 5.5 2.5 4.0 3.4 146 chr2L 7200988 intron CG4502 - chr2L 7201061 intron CG4502 - chr2L 7201134 intron CG4502 - chr2L_17_7200001 chr2L_7200001 RAL-383 202 chr2L 7216444 7216493 chr2L 7216541 7216594 9 96 3.5 2.0 2.8 2.4 150 chr2L 7216444 intron CG13784 - chr2L 7216519 intron CG13784 - chr2L 7216594 intron CG13784 - chr2L_9_7215001 chr2L_7215001 RAL-383 203 chr2L 7216825 7216838 chr2L 7216921 7216934 4 94 6.5 2.0 4.2 0.8 109 chr2L 7216825 intron CG13784 - chr2L 7216880 intron CG13784 - chr2L 7216934 intron CG13784 - chr2L_4_7215001 chr2L_7215001 RAL-383 204 chr2L 7247095 7247113 chr2L 7247218 7247225 9 122 3.0 0.0 1.5 3.6 130 chr2L 7247095 intron Ndae1 - chr2L 7247160 intron Ndae1 - chr2L 7247225 intron Ndae1 - chr2L_9_7245001 chr2L_7245001 RAL-383 205 chr2L 7295977 7296024 chr2L 7296135 7296184 8 160 1.5 3.5 2.5 2.3 207 chr2L 7295977 intergenic not near genes chr2L 7296080 intergenic not near genes chr2L 7296184 intergenic not near genes chr2L_8_7295001 chr2L_7295001 RAL-383 206 chr2L 7335184 7335232 chr2L 7335301 7335349 11 116 6.5 4.5 5.5 1.7 165 chr2L 7335184 intron Wnt6 + chr2L 7335266 intron Wnt6 + chr2L 7335349 intron Wnt6 + chr2L_11_7335001 chr2L_7335001 RAL-383 207 chr2L 7343322 7343353 chr2L 7350445 7350489 roo 4 7133 0.5 4.0 2.2 1.2 7167 chr2L 7343322 intron Wnt6 + chr2L 7346906 intron Wnt6 + chr2L 7350489 intron Wnt6 + chr2L_4_7345001 chr2L_7345001 RAL-383 208 chr2L 7399285 7399333 chr2L 7399678 7399725 9 389 1.0 2.0 1.5 3.6 440 chr2L 7399285 intergenic not near genes chr2L 7399505 intergenic not near genes chr2L 7399725 intergenic not near genes chr2L_9_7395001 chr2L_7395001 RAL-383 209 chr2L 7436185 7436211 chr2L 7436295 7436321 4 110 4.5 5.5 5.0 0.7 136 chr2L 7436185 intergenic not near genes chr2L 7436253 intergenic not near genes chr2L 7436321 intergenic not near genes chr2L_4_7435001 chr2L_7435001 RAL-383 210 chr2L 7454653 7454659 chr2L 7454787 7454793 4 134 3.0 5.0 4.0 0.8 140 chr2L 7454653 intergenic Gr28b -,Gr28a - chr2L 7454723 intergenic Gr28b - chr2L 7454793 intergenic Gr28b - chr2L_4_7450001 chr2L_7450001 RAL-383 211 chr2L 7508338 7508380 chr2L 7508439 7508480 13 100 3.0 5.0 4.0 2.6 142 chr2L 7508338 intron RapGAP1 - chr2L 7508409 intron RapGAP1 - chr2L 7508480 intron RapGAP1 - chr2L_13_7505001 chr2L_7505001 RAL-383 212 chr2L 7512893 7512910 chr2L 7512993 7512999 5 98 8.0 0.0 4.0 1.0 106 chr2L 7512893 intron RapGAP1 - chr2L 7512946 intron RapGAP1 - chr2L 7512999 intron RapGAP1 - chr2L_5_7510001 chr2L_7510001 RAL-383 213 chr2L 7567491 7567514 chr2L 7567588 7567611 6 97 3.0 4.5 3.8 1.2 120 chr2L 7567491 intron RapGAP1 - chr2L 7567551 intron RapGAP1 - chr2L 7567611 intron RapGAP1 - chr2L_6_7565001 chr2L_7565001 RAL-383 214 chr2L 7579185 7579205 chr2L 7579396 7579416 BS 6 211 5.0 0.0 2.5 1.7 231 chr2L 7579185 intergenic RapGAP1 - chr2L 7579300 intergenic RapGAP1 - chr2L 7579416 intergenic RapGAP1 - chr2L_6_7575001 chr2L_7575001 RAL-383 215 chr2L 7585486 7585500 chr2L 7585605 7585619 5 119 3.5 2.5 3.0 1.2 133 chr2L 7585486 intergenic not near genes chr2L 7585552 intergenic not near genes chr2L 7585619 intergenic not near genes chr2L_5_7585001 chr2L_7585001 RAL-383 216 chr2L 7600828 7600859 chr2L 7600916 7600948 15 94 5.0 2.0 3.5 3.3 120 chr2L 7600828 intergenic not near genes chr2L 7600888 intergenic not near genes chr2L 7600948 intergenic not near genes chr2L_15_7600001 chr2L_7600001 RAL-383 217 chr2L 7602601 7602644 chr2L 7602700 7602743 13 99 3.5 2.5 3.0 3.2 142 chr2L 7602601 intergenic not near genes chr2L 7602672 intergenic not near genes chr2L 7602743 intergenic not near genes chr2L_13_7600001 chr2L_7600001 RAL-383 218 chr2L 7649888 7649930 chr2L 7649977 7650029 18 97 4.0 3.5 3.8 3.8 141 chr2L 7649888 intron Slob - chr2L 7649958 intron Slob - chr2L 7650029 intron Slob - chr2L_18_7645001 chr2L_7645001 RAL-383 219 chr2L 7653025 7653047 chr2L 7653139 7653161 7 114 5.5 0.0 2.8 1.8 136 chr2L 7653025 intron Slob - chr2L 7653093 intron Slob - chr2L 7653161 intron Slob - chr2L_7_7650001 chr2L_7650001 RAL-383 220 chr2L 7664961 7664974 chr2L 7665066 7665079 4 104 0.0 0.0 0.0 4.0 118 chr2L 7664961 intron Slob - chr2L 7665020 intron Slob - chr2L 7665079 intron Slob - chr2L_4_7665001 chr2L_7665001 RAL-383 221 chr2L 7702532 7702568 chr2L 7702644 7702680 7 111 0.0 3.5 1.8 2.5 148 chr2L 7702532 intergenic Tep3 + chr2L 7702606 intergenic Tep3 + chr2L 7702680 intergenic Tep3 + chr2L_7_7700001 chr2L_7700001 RAL-383 222 chr2L 7764067 7764094 chr2L 7764174 7764201 6 107 4.0 0.0 2.0 2.0 134 chr2L 7764067 intron CG7196 + chr2L 7764134 intron CG7196 + chr2L 7764201 intron CG7196 + chr2L_6_7760001 chr2L_7760001 RAL-383 223 chr2L 7775612 7775661 chr2L 7775724 7775773 15 112 3.0 1.5 2.2 4.7 161 chr2L 7775612 intergenic CG7179 - chr2L 7775692 intergenic CG7179 - chr2L 7775773 intergenic CG7179 - chr2L_15_7775001 chr2L_7775001 RAL-383 224 chr2L 7788831 7788860 chr2L 7788928 7788957 9 97 1.5 5.0 3.2 2.1 126 chr2L 7788831 intron CG7149 - chr2L 7788894 intron CG7149 - chr2L 7788957 intron CG7149 - chr2L_9_7785001 chr2L_7785001 RAL-383 225 chr2L 7839527 7839579 chr2L 7839637 7839700 6 119 3.0 0.0 1.5 2.4 173 chr2L 7839527 intergenic not near genes chr2L 7839614 intergenic not near genes chr2L 7839700 intergenic not near genes chr2L_6_7835001 chr2L_7835001 RAL-383 226 chr2L 7854234 7854286 chr2L 7854331 7854383 14 97 3.0 3.0 3.0 3.5 149 chr2L 7854234 intron CG14535 - chr2L 7854308 intron CG14535 - chr2L 7854383 intron CG14535 - chr2L_14_7850001 chr2L_7850001 RAL-383 227 chr2L 7922724 7922767 chr2L 7922825 7922868 14 100 5.0 5.0 5.0 2.3 144 chr2L 7922724 intron Snoo - chr2L 7922796 intron Snoo - chr2L 7922868 intron Snoo - chr2L_14_7920001 chr2L_7920001 RAL-383 228 chr2L 7941180 7941194 chr2L 7941278 7941293 4 96 2.5 5.0 3.8 0.8 113 chr2L 7941180 intron Snoo - chr2L 7941236 intron Snoo - chr2L 7941293 intron Snoo - chr2L_4_7940001 chr2L_7940001 RAL-383 229 chr2L 7945967 7945993 chr2L 7946070 7946096 13 101 8.0 0.0 4.0 2.6 129 chr2L 7945967 intron Snoo - chr2L 7946032 intron Snoo - chr2L 7946096 intron Snoo - chr2L_13_7945001 chr2L_7945001 RAL-383 230 chr2L 7959029 7959071 chr2L 7960460 7960504 pogo 6 1427 4.0 1.5 2.8 1.6 1475 chr2L 7959029 intron Snoo - chr2L 7959766 intron Snoo - chr2L 7960504 intron Snoo - chr2L_6_7955001 chr2L_7955001 RAL-383 231 chr2L 7997022 7997064 chr2L 7997142 7997184 14 120 5.5 2.5 4.0 2.8 162 chr2L 7997022 intron CG7227 - chr2L 7997103 intron CG7227 - chr2L 7997184 intron CG7227 - chr2L_14_7995001 chr2L_7995001 RAL-383 232 chr2L 7999749 7999768 chr2L 7999846 7999865 6 96 2.5 3.5 3.0 1.5 116 chr2L 7999749 intron Wwox - chr2L 7999807 3` UTR Wwox - chr2L 7999865 exon Wwox - chr2L_6_7995001 chr2L_7995001 RAL-383 233 chr2L 8003044 8003066 chr2L 8003146 8003166 7 100 0.0 14.0 7.0 0.9 122 chr2L 8003044 intron Wwox - chr2L 8003105 intron Wwox - chr2L 8003166 intron Wwox - chr2L_7_8000001 chr2L_8000001 RAL-383 234 chr2L 8018818 8018835 chr2L 8023621 8023639 Doc 5 4803 0.0 4.5 2.2 1.6 4821 chr2L 8018818 intron Tg + chr2L 8021228 intron Tg + chr2L 8023639 intron Tg + chr2L_5_8020001 chr2L_8020001 RAL-383 235 chr2L 8044075 8044130 chr2L 8044174 8044204 19 95 2.5 4.5 3.5 4.2 129 chr2L 8044075 intron CG7466 + chr2L 8044140 intron CG7466 + chr2L 8044204 intron CG7466 + chr2L_19_8040001 chr2L_8040001 RAL-383 236 chr2L 8128009 8128059 chr2L 8128113 8128152 13 100 3.0 4.0 3.5 2.9 143 chr2L 8128009 intron CG8668 + chr2L 8128080 intron CG8668 + chr2L 8128152 intron CG8668 + chr2L_13_8125001 chr2L_8125001 RAL-383 237 chr2L 8171282 8171287 chr2L 8171377 8171388 4 100 0.0 5.0 2.5 1.1 106 chr2L 8171282 intron Piezo + chr2L 8171335 intron Piezo + chr2L 8171388 intron Piezo + chr2L_4_8170001 chr2L_8170001 RAL-383 238 chr2L 8190172 8190212 chr2L 8190281 8190321 14 108 1.5 7.0 4.2 2.7 149 chr2L 8190172 intergenic Piezo +,CG34134 - chr2L 8190246 intergenic CG34134 -,Piezo + chr2L 8190321 3` UTR CG34134 - chr2L_14_8190001 chr2L_8190001 RAL-383 239 chr2L 8238406 8238415 chr2L 8238504 8238509 4 96 3.5 0.0 1.8 1.4 103 chr2L 8238406 intron Pvr - chr2L 8238458 intron Pvr - chr2L 8238509 intron Pvr - chr2L_4_8235001 chr2L_8235001 RAL-383 240 chr2L 8238425 8238444 chr2L 8238503 8238542 4 92 0.5 0.0 0.2 3.3 117 chr2L 8238425 intron Pvr - chr2L 8238484 intron Pvr - chr2L 8238542 intron Pvr - chr2L_4_8235001 chr2L_8235001 RAL-383 241 chr2L 8246295 8246321 chr2L 8246390 8246417 9 96 3.5 2.0 2.8 2.4 122 chr2L 8246295 intron CG8086 - chr2L 8246356 intron CG8086 - chr2L 8246417 intron CG8086 - chr2L_9_8245001 chr2L_8245001 RAL-383 242 chr2L 8269977 8270027 chr2L 8270079 8270129 9 101 5.0 1.5 3.2 2.1 152 chr2L 8269977 intron Btk29A - chr2L 8270053 intron Btk29A - chr2L 8270129 intron Btk29A - chr2L_9_8270001 chr2L_8270001 RAL-383 243 chr2L 8271625 8271748 chr2L 8271721 8271869 18 104 1.0 1.0 1.0 9.0 244 chr2L 8271625 intron Btk29A - chr2L 8271747 intron Btk29A - chr2L 8271869 intron Btk29A - chr2L_18_8270001 chr2L_8270001 RAL-383 244 chr2L 8285001 8285035 chr2L 8285097 8285131 17 96 4.5 3.5 4.0 3.4 130 chr2L 8285001 intron Btk29A - chr2L 8285066 intron Btk29A - chr2L 8285131 intron Btk29A - chr2L_17_8285001 chr2L_8285001 RAL-383 245 chr2L 8286298 8286324 chr2L 8286388 8286424 6 100 4.0 5.0 4.5 1.1 126 chr2L 8286298 intron Btk29A - chr2L 8286361 intron Btk29A - chr2L 8286424 intron Btk29A - chr2L_6_8285001 chr2L_8285001 RAL-383 246 chr2L 8411803 8411807 chr2L 8411964 8411979 5 170 5.0 3.5 4.2 1.0 176 chr2L 8411803 5` UTR CG13397 - chr2L 8411891 intergenic CG13397 -,CG13398 - chr2L 8411979 intergenic CG13397 -,CG13398 - chr2L_5_8410001 chr2L_8410001 RAL-383 247 chr2L 8452406 8452439 chr2L 8461596 8461630 roo 8 9189 4.0 7.0 5.5 1.2 9224 chr2L 8452406 intron fu12 - chr2L 8457018 intron fu12 - chr2L 8461630 intron fu12 - chr2L_8_8455001 chr2L_8455001 RAL-383 248 chr2L 8503586 8503620 chr2L 8503689 8503723 9 102 1.0 2.5 1.8 3.2 137 chr2L 8503586 intron Dh31 - chr2L 8503654 intron Dh31 - chr2L 8503723 intron Dh31 - chr2L_9_8500001 chr2L_8500001 RAL-383 249 chr2L 8521730 8521784 chr2L 8521834 8521889 16 103 2.0 3.0 2.5 4.6 159 chr2L 8521730 3` UTR CG13091 + chr2L 8521810 intergenic CG13091 +,Acer + chr2L 8521889 intergenic Acer +,CG13091 + chr2L_16_8520001 chr2L_8520001 RAL-383 250 chr2L 8588891 8588904 chr2L 8589002 8589015 6 111 5.0 3.5 4.2 1.2 124 chr2L 8588891 intron Sema-1a + chr2L 8588953 intron Sema-1a + chr2L 8589015 intron Sema-1a + chr2L_6_8585001 chr2L_8585001 RAL-383 251 chr2L 8588905 8588926 chr2L 8588996 8589014 8 102 2.5 3.0 2.8 2.1 109 chr2L 8588905 intron Sema-1a + chr2L 8588960 intron Sema-1a + chr2L 8589014 intron Sema-1a + chr2L_8_8585001 chr2L_8585001 RAL-383 252 chr2L 8612835 8612869 chr2L 8612932 8612966 12 96 2.0 6.0 4.0 2.4 131 chr2L 8612835 intron Sema-1a + chr2L 8612900 intron Sema-1a + chr2L 8612966 intron Sema-1a + chr2L_12_8610001 chr2L_8610001 RAL-383 253 chr2L 8649910 8649959 chr2L 8650019 8650063 5 107 2.0 0.0 1.0 2.5 153 chr2L 8649910 intron Sema-1a + chr2L 8649986 intron Sema-1a + chr2L 8650063 intron Sema-1a + chr2L_5_8645001 chr2L_8645001 RAL-383 254 chr2L 8687065 8687087 chr2L 8687189 8687211 4 124 5.0 5.5 5.2 0.6 146 chr2L 8687065 intergenic Trs23 +,Hnf4 - chr2L 8687138 intergenic Trs23 +,Hnf4 - chr2L 8687211 intergenic Hnf4 -,Trs23 + chr2L_4_8685001 chr2L_8685001 RAL-383 255 chr2L 8701519 8701568 chr2L 8701616 8701665 11 96 4.5 3.5 4.0 2.2 146 chr2L 8701519 intron Hnf4 - chr2L 8701592 intron Hnf4 - chr2L 8701665 intron Hnf4 - chr2L_11_8700001 chr2L_8700001 RAL-383 256 chr2L 8723101 8723145 chr2L 8731498 8731542 Tirant 15 8394 2.5 2.5 2.5 4.3 8441 chr2L 8723101 intron raw - chr2L 8727322 intron raw - chr2L 8731542 intron raw - chr2L_15_8725001 chr2L_8725001 RAL-383 257 chr2L 8736245 8736256 chr2L 8736345 8736356 9 100 1.0 3.5 2.2 2.8 111 chr2L 8736245 intron raw - chr2L 8736300 intron raw - chr2L 8736356 intron raw - chr2L_9_8735001 chr2L_8735001 RAL-383 258 chr2L 8784615 8784654 chr2L 8784711 8784758 6 100 0.0 4.5 2.2 1.9 143 chr2L 8784615 intergenic not near genes chr2L 8784686 intergenic not near genes chr2L 8784758 intergenic not near genes chr2L_6_8780001 chr2L_8780001 RAL-383 259 chr2L 8799789 8799832 chr2L 8799925 8799957 7 131 4.0 7.0 5.5 1.1 168 chr2L 8799789 intergenic not near genes chr2L 8799873 intergenic not near genes chr2L 8799957 intergenic not near genes chr2L_7_8795001 chr2L_8795001 RAL-383 260 chr2L 8803167 8803202 chr2L 8803266 8803308 8 107 3.5 1.5 2.5 2.3 141 chr2L 8803167 intergenic not near genes chr2L 8803238 intergenic not near genes chr2L 8803308 intergenic not near genes chr2L_8_8800001 chr2L_8800001 RAL-383 261 chr2L 8820909 8820954 chr2L 8821008 8821053 11 99 5.0 3.0 4.0 2.2 144 chr2L 8820909 intergenic not near genes chr2L 8820981 intergenic not near genes chr2L 8821053 intergenic not near genes chr2L_11_8820001 chr2L_8820001 RAL-383 262 chr2L 8910712 8910725 chr2L 8910823 8910836 4 111 6.0 2.0 4.0 0.8 124 chr2L 8910712 intron CG34398 + chr2L 8910774 intron CG34398 + chr2L 8910836 intron CG34398 + chr2L_4_8910001 chr2L_8910001 RAL-383 263 chr2L 9000265 9000310 chr2L 9007795 9007840 roo 4 7530 2.5 0.0 1.2 1.8 7575 chr2L 9000265 intergenic Try29F + chr2L 9004052 intergenic not near genes chr2L 9007840 intergenic not near genes chr2L_4_9000001 chr2L_9000001 RAL-383 264 chr2L 9084337 9084340 chr2L 16217660 16217660 5 7133321 12.0 16.0 14.0 0.3 7133323 chr2L 9084337 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_5_12650001 chr2L_12650001 RAL-383 265 chr2L 9158767 9158794 chr2L 9158884 9158911 5 117 7.5 4.5 6.0 0.7 144 chr2L 9158767 intron CG32982 + chr2L 9158839 intron CG32982 + chr2L 9158911 intron CG32982 + chr2L_5_9155001 chr2L_9155001 RAL-383 266 chr2L 9259201 9259245 chr2L 9259307 9259334 8 95 2.5 2.0 2.2 2.5 133 chr2L 9259201 intron Ggamma30A + chr2L 9259268 intron Ggamma30A + chr2L 9259334 intron Ggamma30A + chr2L_8_9255001 chr2L_9255001 RAL-383 267 chr2L 9264326 9264378 chr2L 9264446 9264498 23 119 3.0 3.0 3.0 5.8 172 chr2L 9264326 intron Ggamma30A + chr2L 9264412 intron Ggamma30A + chr2L 9264498 intron Ggamma30A + chr2L_23_9260001 chr2L_9260001 RAL-383 268 chr2L 9270730 9270765 chr2L 9270840 9270880 8 105 3.5 5.0 4.2 1.5 150 chr2L 9270730 intron Ggamma30A + chr2L 9270805 intron Ggamma30A + chr2L 9270880 intron Ggamma30A + chr2L_8_9270001 chr2L_9270001 RAL-383 269 chr2L 9279980 9280021 chr2L 9280082 9280135 7 112 0.5 4.0 2.2 2.2 155 chr2L 9279980 intron Ggamma30A + chr2L 9280058 intron Ggamma30A + chr2L 9280135 intron Ggamma30A + chr2L_7_9280001 chr2L_9280001 RAL-383 270 chr2L 9297357 9297404 chr2L 9297454 9297501 13 95 2.0 4.5 3.2 3.1 144 chr2L 9297357 3` UTR Ggamma30A + chr2L 9297429 3` UTR Ggamma30A + chr2L 9297501 3` UTR Ggamma30A + chr2L_13_9295001 chr2L_9295001 RAL-383 271 chr2L 9300679 9300694 chr2L 9300785 9300800 4 106 6.0 0.0 3.0 1.0 121 chr2L 9300679 3` UTR Ggamma30A + chr2L 9300740 3` UTR Ggamma30A + chr2L 9300800 3` UTR Ggamma30A + chr2L_4_9300001 chr2L_9300001 RAL-383 272 chr2L 9322794 9322969 chr2L 9322890 9323113 21 118 0.0 0.5 0.2 17.5 319 chr2L 9322794 intergenic not near genes chr2L 9322954 intergenic not near genes chr2L 9323113 intergenic not near genes chr2L_21_9320001 chr2L_9320001 RAL-383 273 chr2L 9364280 9364334 chr2L 9364399 9364429 6 115 0.0 1.5 0.8 3.3 149 chr2L 9364280 intergenic CR43404 + chr2L 9364354 5` UTR CR43404 + chr2L 9364429 intron CR43404 + chr2L_6_9360001 chr2L_9360001 RAL-383 274 chr2L 9387232 9387273 chr2L 9387350 9387391 6 118 1.0 1.0 1.0 3.0 159 chr2L 9387232 intron Shawl - chr2L 9387312 intron Shawl - chr2L 9387391 intron,5` UTR Shawl -,Aldh + chr2L_6_9385001 chr2L_9385001 RAL-383 275 chr2L 9393488 9393519 chr2L 9396473 9396506 jockey 9 2986 1.0 5.5 3.2 2.1 3018 chr2L 9393488 intron Shawl - chr2L 9394997 intron Shawl - chr2L 9396506 intron Shawl - chr2L_9_9390001 chr2L_9390001 RAL-383 276 chr2L 9406722 9406750 chr2L 9406841 9406869 10 119 4.5 6.0 5.2 1.6 147 chr2L 9406722 intron Shawl - chr2L 9406796 intron Shawl - chr2L 9406869 intron Shawl - chr2L_10_9405001 chr2L_9405001 RAL-383 277 chr2L 9420991 9421024 chr2L 9421139 9421188 4 159 0.0 2.5 1.2 1.8 197 chr2L 9420991 intron Mco1 + chr2L 9421090 intron Mco1 + chr2L 9421188 intron Mco1 + chr2L_4_9420001 chr2L_9420001 RAL-383 278 chr2L 9422787 9422832 chr2L 9422918 9422963 7 130 4.0 2.5 3.2 1.7 176 chr2L 9422787 intron Mco1 + chr2L 9422875 intron Mco1 + chr2L 9422963 intron Mco1 + chr2L_7_9420001 chr2L_9420001 RAL-383 279 chr2L 9456917 9456954 chr2L 9457012 9457044 13 98 5.5 2.5 4.0 2.6 127 chr2L 9456917 intron numb + chr2L 9456980 intron numb + chr2L 9457044 intron numb + chr2L_13_9455001 chr2L_9455001 RAL-383 280 chr2L 9464864 9464871 chr2L 9464961 9464968 8 98 3.0 0.0 1.5 3.2 104 chr2L 9464864 intergenic not near genes chr2L 9464916 intergenic not near genes chr2L 9464968 intergenic not near genes chr2L_8_9460001 chr2L_9460001 RAL-383 281 chr2L 9493238 9493255 chr2L 9493341 9493359 4 104 4.5 5.5 5.0 0.7 121 chr2L 9493238 intron Gdi - chr2L 9493298 intron Gdi - chr2L 9493359 intron Gdi - chr2L_4_9490001 chr2L_9490001 RAL-383 282 chr2L 9493258 9493271 chr2L 9493332 9493375 6 98 3.0 4.0 3.5 1.3 117 chr2L 9493258 intron Gdi - chr2L 9493316 intron Gdi - chr2L 9493375 intron Gdi - chr2L_6_9490001 chr2L_9490001 RAL-383 283 chr2L 9530041 9530091 chr2L 9530152 9530202 18 109 4.0 4.0 4.0 3.6 161 chr2L 9530041 intron Oatp30B + chr2L 9530122 intron Oatp30B + chr2L 9530202 intron Oatp30B + chr2L_18_9530001 chr2L_9530001 RAL-383 284 chr2L 9571732 9571757 chr2L 9571829 9571839 4 90 3.0 5.5 4.2 0.8 107 chr2L 9571732 exon CG3838 + chr2L 9571786 intron CG3838 + chr2L 9571839 intron CG3838 + chr2L_4_9570001 chr2L_9570001 RAL-383 285 chr2L 9730959 9731001 chr2L 9731058 9731103 21 101 2.5 2.0 2.2 6.6 144 chr2L 9730959 intron Nckx30C - chr2L 9731031 intron Nckx30C - chr2L 9731103 intron Nckx30C - chr2L_21_9730001 chr2L_9730001 RAL-383 286 chr2L 9819977 9819997 chr2L 9820201 9820221 7 223 4.0 5.5 4.8 1.2 244 chr2L 9819977 intron nAChRalpha6 - chr2L 9820099 intron nAChRalpha6 - chr2L 9820221 intron nAChRalpha6 - chr2L_7_9820001 chr2L_9820001 RAL-383 287 chr2L 9837428 9837447 chr2L 9837526 9837530 8 96 1.5 4.5 3.0 2.0 102 chr2L 9837428 intron nAChRalpha6 - chr2L 9837479 intron nAChRalpha6 - chr2L 9837530 intron nAChRalpha6 - chr2L_8_9835001 chr2L_9835001 RAL-383 288 chr2L 9862344 9862357 chr2L 9862472 9862485 5 128 0.0 7.0 3.5 1.1 141 chr2L 9862344 intron nAChRalpha6 - chr2L 9862414 intron nAChRalpha6 - chr2L 9862485 intron nAChRalpha6 - chr2L_5_9860001 chr2L_9860001 RAL-383 289 chr2L 9883148 9883165 chr2L 9883264 9883281 7 116 5.5 3.0 4.2 1.3 133 chr2L 9883148 intron nAChRalpha6 - chr2L 9883214 intron nAChRalpha6 - chr2L 9883281 intron nAChRalpha6 - chr2L_7_9880001 chr2L_9880001 RAL-383 290 chr2L 9892485 9892532 chr2L 9892581 9892628 17 96 6.0 4.5 5.2 2.7 143 chr2L 9892485 intron mtDNA-helicase - chr2L 9892556 intron mtDNA-helicase - chr2L 9892628 intron mtDNA-helicase - chr2L_17_9890001 chr2L_9890001 RAL-383 291 chr2L 9973730 9973746 chr2L 9980851 9980885 HMS-Beagle 8 7133 4.5 6.5 5.5 1.2 7155 chr2L 9973730 intergenic not near genes chr2L 9977308 intergenic not near genes chr2L 9980885 intergenic not near genes chr2L_8_9975001 chr2L_9975001 RAL-383 292 chr2L 9982205 9982231 chr2L 9982328 9982354 7 123 0.0 6.5 3.2 1.7 149 chr2L 9982205 intergenic not near genes chr2L 9982280 intergenic not near genes chr2L 9982354 intergenic not near genes chr2L_7_9980001 chr2L_9980001 RAL-383 293 chr2L 10082579 10082609 chr2L 10083342 10083372 6 763 2.5 6.0 4.2 1.2 793 chr2L 10082579 intron CG44153 - chr2L 10082976 intron CG44153 - chr2L 10083372 intron CG44153 - chr2L_6_10080001 chr2L_10080001 RAL-383 294 chr2L 10137640 10137683 chr2L 10144044 10144087 Rt1c 14 6399 1.5 1.5 1.5 5.6 6447 chr2L 10137640 intron CG44153 - chr2L 10140864 intron CG44153 - chr2L 10144087 intron CG44153 - chr2L_14_10140001 chr2L_10140001 RAL-383 295 chr2L 10153187 10153233 chr2L 10153286 10153332 11 93 0.5 3.5 2.0 3.7 145 chr2L 10153187 intron,exon CG44153 -,CG4839 + chr2L 10153260 intron,intron CG44153 -,CG4839 + chr2L 10153332 intron,exon CG44153 -,CG4839 + chr2L_11_10150001 chr2L_10150001 RAL-383 296 chr2L 10156302 10156321 chr2L 10163792 10163794 blood 6 7487 8.5 2.5 5.5 0.9 7492 chr2L 10156302 intron,3` UTR CG44153 -,CG4839 + chr2L 10160048 intron CG44153 - chr2L 10163794 intron CG44153 - chr2L_6_10160001 chr2L_10160001 RAL-383 297 chr2L 10156327 10156350 chr2L 10163791 10163839 blood 10 7476 3.5 2.5 3.0 2.5 7512 chr2L 10156327 intron,3` UTR CG44153 -,CG4839 + chr2L 10160083 intron CG44153 - chr2L 10163839 intron CG44153 - chr2L_10_10160001 chr2L_10160001 RAL-383 298 chr2L 10165828 10165879 chr2L 10165957 10166008 10 127 3.0 3.5 3.2 2.4 180 chr2L 10165828 intron CG44153 - chr2L 10165918 intron CG44153 - chr2L 10166008 intron CG44153 - chr2L_10_10165001 chr2L_10165001 RAL-383 299 chr2L 10176023 10176024 chr2L 16071771 16071771 6 5895747 23.0 17.0 20.0 0.3 5895748 chr2L 10176023 intron CG44153 - chr2L 13123897 intergenic not near genes chr2L 16071771 intron beat-Ia + chr2L_6_13120001 chr2L_13120001 RAL-383 300 chr2L 10176714 10176715 chr2L 10176941 10176990 13 234 25.5 33.5 29.5 0.4 276 chr2L 10176714 intron CG44153 - chr2L 10176852 intron CG44153 - chr2L 10176990 intron CG44153 - chr2L_13_10175001 chr2L_10175001 RAL-383 301 chr2L 10232895 10232911 chr2L 10232993 10233009 6 98 9.0 6.5 7.8 0.7 114 chr2L 10232895 intron eEF1delta + chr2L 10232952 intron eEF1delta + chr2L 10233009 intron eEF1delta + chr2L_6_10230001 chr2L_10230001 RAL-383 302 chr2L 10232916 10232945 chr2L 10232989 10233043 7 94 3.0 6.5 4.8 1.2 127 chr2L 10232916 intron eEF1delta + chr2L 10232980 intron eEF1delta + chr2L 10233043 intron eEF1delta + chr2L_7_10230001 chr2L_10230001 RAL-383 303 chr2L 10281654 10281816 chr2L 10281769 10281926 9 110 0.0 0.0 0.0 9.0 272 chr2L 10281654 intergenic CG5604 - chr2L 10281790 intergenic CG5604 - chr2L 10281926 intergenic CG5604 - chr2L_9_10280001 chr2L_10280001 RAL-383 304 chr2L 10294159 10294179 chr2L 10294255 10294275 4 94 4.0 3.5 3.8 0.8 116 chr2L 10294159 intron Hand - chr2L 10294217 intron Hand - chr2L 10294275 intron Hand - chr2L_4_10290001 chr2L_10290001 RAL-383 305 chr2L 10321906 10321923 chr2L 10322007 10322024 4 100 6.5 5.0 5.8 0.6 118 chr2L 10321906 intron CG5381 - chr2L 10321965 intron CG5381 - chr2L 10322024 intron CG5381 - chr2L_4_10320001 chr2L_10320001 RAL-383 306 chr2L 10344833 10344877 chr2L 10344940 10344988 6 110 3.5 0.0 1.8 2.1 155 chr2L 10344833 intron CG5022 + chr2L 10344910 intron CG5022 + chr2L 10344988 intron CG5022 + chr2L_6_10340001 chr2L_10340001 RAL-383 307 chr2L 10407725 10407774 chr2L 10407826 10407874 9 100 0.5 1.0 0.8 5.0 149 chr2L 10407725 intron Ir31a + chr2L 10407800 intron Ir31a + chr2L 10407874 exon Ir31a + chr2L_9_10405001 chr2L_10405001 RAL-383 308 chr2L 10422971 10423022 chr2L 10423074 10423125 22 103 6.0 3.0 4.5 4.0 154 chr2L 10422971 intergenic pie -,CG5168 + chr2L 10423048 intergenic CG5168 +,pie - chr2L 10423125 intergenic CG5168 +,pie - chr2L_22_10420001 chr2L_10420001 RAL-383 309 chr2L 10500052 10500079 chr2L 10500157 10500185 6 106 2.5 3.0 2.8 1.6 133 chr2L 10500052 intron Myo31DF - chr2L 10500118 intron Myo31DF - chr2L 10500185 intron Myo31DF - chr2L_6_10500001 chr2L_10500001 RAL-383 310 chr2L 10502639 10502663 chr2L 10502710 10502760 9 94 4.5 3.5 4.0 1.8 121 chr2L 10502639 intron Myo31DF - chr2L 10502700 intron Myo31DF - chr2L 10502760 intron Myo31DF - chr2L_9_10500001 chr2L_10500001 RAL-383 311 chr2L 10531591 10531613 chr2L 10531703 10531725 9 112 0.5 1.5 1.0 4.5 134 chr2L 10531591 3` UTR Lip4 + chr2L 10531658 3` UTR Lip4 + chr2L 10531725 3` UTR Lip4 + chr2L_9_10530001 chr2L_10530001 RAL-383 312 chr2L 10540854 10540870 chr2L 10540952 10540968 6 98 6.5 6.0 6.2 0.8 114 chr2L 10540854 intergenic not near genes chr2L 10540911 intergenic not near genes chr2L 10540968 intergenic not near genes chr2L_6_10540001 chr2L_10540001 RAL-383 313 chr2L 10574571 10574593 chr2L 10574665 10574710 5 112 4.0 3.0 3.5 1.1 139 chr2L 10574571 intron Trim9 + chr2L 10574640 intron Trim9 + chr2L 10574710 intron Trim9 + chr2L_5_10570001 chr2L_10570001 RAL-383 314 chr2L 10576094 10576149 chr2L 10576190 10576245 7 88 0.5 0.0 0.2 5.8 151 chr2L 10576094 intron,3` UTR Trim9 +,w-cup - chr2L 10576170 intron,3` UTR Trim9 +,w-cup - chr2L 10576245 intron,3` UTR Trim9 +,w-cup - chr2L_7_10575001 chr2L_10575001 RAL-383 315 chr2L 10580666 10580707 chr2L 10580762 10580797 9 95 3.0 2.0 2.5 2.6 131 chr2L 10580666 intron Trim9 + chr2L 10580732 intron Trim9 + chr2L 10580797 intron Trim9 + chr2L_9_10580001 chr2L_10580001 RAL-383 316 chr2L 10592832 10592869 chr2L 10600514 10600551 opus 12 7679 1.0 5.0 3.0 3.0 7719 chr2L 10592832 intron Trim9 + chr2L 10596692 intron Trim9 + chr2L 10600551 intron Trim9 + chr2L_12_10595001 chr2L_10595001 RAL-383 317 chr2L 10605183 10605205 chr2L 10605280 10605283 4 92 0.0 5.5 2.8 1.1 100 chr2L 10605183 intron Trim9 + chr2L 10605233 intron Trim9 + chr2L 10605283 intron Trim9 + chr2L_4_10605001 chr2L_10605001 RAL-383 318 chr2L 10653246 10653291 chr2L 10653362 10653398 11 112 1.5 3.0 2.2 3.4 152 chr2L 10653246 exon CG17098 + chr2L 10653322 intron CG17098 + chr2L 10653398 intron CG17098 + chr2L_11_10650001 chr2L_10650001 RAL-383 319 chr2L 10656575 10656590 chr2L 10656671 10656686 6 95 6.0 4.0 5.0 1.0 111 chr2L 10656575 intergenic not near genes chr2L 10656630 intergenic not near genes chr2L 10656686 intergenic not near genes chr2L_6_10655001 chr2L_10655001 RAL-383 320 chr2L 10656593 10656609 chr2L 10656669 10656705 6 92 4.0 4.0 4.0 1.2 112 chr2L 10656593 intergenic not near genes chr2L 10656649 intergenic not near genes chr2L 10656705 intergenic not near genes chr2L_6_10655001 chr2L_10655001 RAL-383 321 chr2L 10668566 10668617 chr2L 10668668 10668719 11 97 3.5 2.5 3.0 2.8 153 chr2L 10668566 intron CG31871 + chr2L 10668642 intron CG31871 + chr2L 10668719 exon CG31871 + chr2L_11_10665001 chr2L_10665001 RAL-383 322 chr2L 10679017 10679029 chr2L 10679126 10679126 4 104 7.5 1.0 4.2 0.8 109 chr2L 10679017 exon CG17104 + chr2L 10679072 exon CG17104 + chr2L 10679126 exon CG17104 + chr2L_4_10675001 chr2L_10675001 RAL-383 323 chr2L 10683427 10683478 chr2L 10683526 10683577 7 99 1.0 0.0 0.5 4.7 150 chr2L 10683427 3` UTR CG7299 - chr2L 10683502 3` UTR CG7299 - chr2L 10683577 3` UTR CG7299 - chr2L_7_10680001 chr2L_10680001 RAL-383 324 chr2L 10793297 10793343 chr2L 10793394 10793440 14 95 2.5 2.5 2.5 4.0 143 chr2L 10793297 intron CG31869 - chr2L 10793368 intron CG31869 - chr2L 10793440 intron CG31869 - chr2L_14_10790001 chr2L_10790001 RAL-383 325 chr2L 10803752 10803796 chr2L 10803857 10803876 6 99 3.5 3.5 3.5 1.3 124 chr2L 10803752 intergenic not near genes chr2L 10803814 intergenic Nos - chr2L 10803876 intergenic Nos - chr2L_6_10800001 chr2L_10800001 RAL-383 326 chr2L 10836767 10836781 chr2L 10836865 10836879 6 98 2.0 6.0 4.0 1.2 112 chr2L 10836767 intron Nos - chr2L 10836823 intron Nos - chr2L 10836879 intron Nos - chr2L_6_10835001 chr2L_10835001 RAL-383 327 chr2L 10850936 10850987 chr2L 10851036 10851081 5 100 2.5 0.0 1.2 2.3 145 chr2L 10850936 intron CG43129 + chr2L 10851008 intron CG43129 + chr2L 10851081 intron CG43129 + chr2L_5_10850001 chr2L_10850001 RAL-383 328 chr2L 10852148 10852182 chr2L 10852257 10852291 11 109 8.0 7.0 7.5 1.3 143 chr2L 10852148 intron CG43129 + chr2L 10852220 intron CG43129 + chr2L 10852291 intron CG43129 + chr2L_11_10850001 chr2L_10850001 RAL-383 329 chr2L 10861508 10861556 chr2L 10861608 10861656 7 96 1.5 0.0 0.8 3.9 148 chr2L 10861508 exon Stam + chr2L 10861582 3` UTR Stam + chr2L 10861656 3` UTR Stam + chr2L_7_10860001 chr2L_10860001 RAL-383 330 chr2L 10862862 10862866 chr2L 10864451 10864494 Rt1c 6 1619 4.0 2.5 3.2 1.4 1632 chr2L 10862862 3` UTR CR43807 - chr2L 10863678 intron CR43807 - chr2L 10864494 3` UTR CR43807 - chr2L_6_10860001 chr2L_10860001 RAL-383 331 chr2L 10946938 10946974 chr2L 10956172 10956194 roo 5 9232 2.5 4.5 3.5 1.1 9256 chr2L 10946938 intron dpr2 - chr2L 10951566 intron dpr2 - chr2L 10956194 intron dpr2 - chr2L_5_10950001 chr2L_10950001 RAL-383 332 chr2L 11075361 11075382 chr2L 11075803 11075813 4 435 28.5 26.0 27.2 0.1 452 chr2L 11075361 intergenic CG43725 +,CR45725 - chr2L 11075587 exon CG43725 + chr2L 11075813 3` UTR CG43725 + chr2L_4_11075001 chr2L_11075001 RAL-383 333 chr2L 11075358 11075389 chr2L 11075814 11075820 4 437 30.0 23.0 26.5 0.1 462 chr2L 11075358 intergenic CG43725 +,CR45725 - chr2L 11075589 exon CG43725 + chr2L 11075820 3` UTR CG43725 + chr2L_4_11075001 chr2L_11075001 RAL-383 334 chr2L 11144549 11144594 chr2L 11144704 11144751 9 154 5.0 3.0 4.0 1.8 202 chr2L 11144549 intron Gyc32E - chr2L 11144650 intron,3` UTR Gyc32E -,CG31867 - chr2L 11144751 intron,exon Gyc32E -,CG31867 - chr2L_9_11140001 chr2L_11140001 RAL-383 335 chr2L 11169571 11169587 chr2L 11169673 11169689 11 102 0.0 7.0 3.5 2.4 118 chr2L 11169571 intron Ca-beta - chr2L 11169630 intron Ca-beta - chr2L 11169689 intron Ca-beta - chr2L_11_11165001 chr2L_11165001 RAL-383 336 chr2L 11198507 11198518 chr2L 11198592 11198621 11 101 0.0 5.0 2.5 3.1 114 chr2L 11198507 intron Ca-beta - chr2L 11198564 intron Ca-beta - chr2L 11198621 intron Ca-beta - chr2L_11_11195001 chr2L_11195001 RAL-383 337 chr2L 11201679 11201692 chr2L 11201778 11201786 6 98 5.0 0.0 2.5 1.7 107 chr2L 11201679 intron Ca-beta - chr2L 11201732 intron Ca-beta - chr2L 11201786 intron Ca-beta - chr2L_6_11200001 chr2L_11200001 RAL-383 338 chr2L 11205445 11205490 chr2L 11205605 11205648 17 157 3.5 3.0 3.2 4.0 203 chr2L 11205445 intergenic CR43859 - chr2L 11205546 3` UTR CR43859 - chr2L 11205648 3` UTR CR43859 - chr2L_17_11205001 chr2L_11205001 RAL-383 339 chr2L 11224038 11224087 chr2L 11224169 11224218 21 131 5.0 1.5 3.2 5.0 180 chr2L 11224038 intron ab + chr2L 11224128 intron ab + chr2L 11224218 intron ab + chr2L_21_11220001 chr2L_11220001 RAL-383 340 chr2L 11226997 11227048 chr2L 11227100 11227151 9 100 3.5 3.5 3.5 2.0 154 chr2L 11226997 intron ab + chr2L 11227074 intron ab + chr2L 11227151 intron ab + chr2L_9_11225001 chr2L_11225001 RAL-383 341 chr2L 11292364 11292407 chr2L 11292460 11292509 11 98 2.0 6.0 4.0 2.2 145 chr2L 11292364 intergenic not near genes chr2L 11292436 intergenic not near genes chr2L 11292509 intergenic not near genes chr2L_11_11290001 chr2L_11290001 RAL-383 342 chr2L 11293713 11293728 chr2L 11293870 11293885 5 157 11.5 8.0 9.8 0.5 172 chr2L 11293713 intergenic not near genes chr2L 11293799 intergenic not near genes chr2L 11293885 intergenic not near genes chr2L_5_11290001 chr2L_11290001 RAL-383 343 chr2L 11293730 11293751 chr2L 11293864 11293902 11 154 5.0 6.5 5.8 1.6 172 chr2L 11293730 intergenic not near genes chr2L 11293816 intergenic not near genes chr2L 11293902 intergenic not near genes chr2L_11_11290001 chr2L_11290001 RAL-383 344 chr2L 11309004 11309038 chr2L 11309114 11309164 4 122 1.5 0.0 0.8 2.2 160 chr2L 11309004 intergenic not near genes chr2L 11309084 intergenic not near genes chr2L 11309164 intergenic not near genes chr2L_4_11305001 chr2L_11305001 RAL-383 345 chr2L 11449974 11450020 chr2L 11450204 11450250 10 232 22.5 22.5 22.5 0.4 276 chr2L 11449974 intergenic not near genes chr2L 11450112 intergenic not near genes chr2L 11450250 intergenic not near genes chr2L_10_11450001 chr2L_11450001 RAL-383 346 chr2L 11453125 11453141 chr2L 11453232 11453274 4 126 0.0 2.0 1.0 2.0 149 chr2L 11453125 intergenic not near genes chr2L 11453200 intergenic not near genes chr2L 11453274 intergenic not near genes chr2L_4_11450001 chr2L_11450001 RAL-383 347 chr2L 11469502 11469512 chr2L 11469604 11469614 5 102 3.5 3.5 3.5 1.1 112 chr2L 11469502 intergenic not near genes chr2L 11469558 intergenic not near genes chr2L 11469614 intergenic not near genes chr2L_5_11465001 chr2L_11465001 RAL-383 348 chr2L 11485665 11485700 chr2L 11485761 11485796 10 96 1.5 0.0 0.8 5.6 131 chr2L 11485665 exon,5` UTR CG43355 +,sala + chr2L 11485730 3` UTR,5` UTR CG43355 +,sala + chr2L 11485796 intron,intron CG43355 +,sala + chr2L_10_11485001 chr2L_11485001 RAL-383 349 chr2L 11493542 11493577 chr2L 11493654 11493690 4 112 0.0 1.5 0.8 2.2 148 chr2L 11493542 intergenic not near genes chr2L 11493616 intergenic not near genes chr2L 11493690 intergenic not near genes chr2L_4_11490001 chr2L_11490001 RAL-383 350 chr2L 11540586 11540606 chr2L 11548008 11548028 Tabor 4 7421 3.5 2.5 3.0 1.0 7442 chr2L 11540586 intergenic not near genes chr2L 11544307 intergenic not near genes chr2L 11548028 intergenic not near genes chr2L_4_11540001 chr2L_11540001 RAL-383 351 chr2L 11563618 11563670 chr2L 11568842 11568889 copia 5 5220 1.5 0.0 0.8 2.8 5271 chr2L 11563618 intergenic not near genes chr2L 11566254 intergenic not near genes chr2L 11568889 intergenic not near genes chr2L_5_11565001 chr2L_11565001 RAL-383 352 chr2L 11618532 11618572 chr2L 11618643 11618683 14 109 2.5 2.5 2.5 4.0 151 chr2L 11618532 intron kek2 + chr2L 11618608 intron kek2 + chr2L 11618683 intron kek2 + chr2L_14_11615001 chr2L_11615001 RAL-383 353 chr2L 11633148 11633174 chr2L 11633270 11633279 4 115 3.0 2.5 2.8 1.1 131 chr2L 11633148 intergenic not near genes chr2L 11633214 intergenic not near genes chr2L 11633279 intergenic not near genes chr2L_4_11630001 chr2L_11630001 RAL-383 354 chr2L 11676214 11676236 chr2L 11676507 11676513 7 290 3.0 2.0 2.5 2.0 299 chr2L 11676214 intergenic not near genes chr2L 11676364 intergenic not near genes chr2L 11676513 intergenic not near genes chr2L_7_11675001 chr2L_11675001 RAL-383 355 chr2L 11713494 11713538 chr2L 11720982 11721026 blood 4 7488 2.5 5.0 3.8 0.8 7532 chr2L 11713494 intergenic not near genes chr2L 11717260 intergenic not near genes chr2L 11721026 intergenic CR44143 + chr2L_4_11715001 chr2L_11715001 RAL-383 356 chr2L 11743727 11743767 chr2L 11743824 11743864 13 92 5.0 6.0 5.5 2.0 137 chr2L 11743727 exon Vha100-5 + chr2L 11743796 intron,3` UTR Vha100-5 +,CR44144 - chr2L 11743864 exon,3` UTR Vha100-5 +,CR44144 - chr2L_13_11740001 chr2L_11740001 RAL-383 357 chr2L 11752847 11752888 chr2L 11753157 11753198 8 304 1.5 4.0 2.8 2.1 351 chr2L 11752847 intergenic CG42470 - chr2L 11753022 3` UTR CG42470 - chr2L 11753198 3` UTR CG42470 - chr2L_8_11750001 chr2L_11750001 RAL-383 358 chr2L 11781014 11781193 chr2L 11781118 11781289 5 99 0.0 0.0 0.0 5.0 275 chr2L 11781014 intergenic not near genes chr2L 11781152 intergenic not near genes chr2L 11781289 intergenic not near genes chr2L_5_11780001 chr2L_11780001 RAL-383 359 chr2L 11841327 11841353 chr2L 11841444 11841469 6 117 3.5 0.0 1.8 2.1 142 chr2L 11841327 intron Pde1c - chr2L 11841398 intron Pde1c - chr2L 11841469 intron Pde1c - chr2L_6_11840001 chr2L_11840001 RAL-383 360 chr2L 11862338 11862391 chr2L 11862451 11862503 18 112 2.0 2.5 2.2 5.6 165 chr2L 11862338 intron Pde1c - chr2L 11862420 intron Pde1c - chr2L 11862503 intron Pde1c - chr2L_18_11860001 chr2L_11860001 RAL-383 361 chr2L 11904666 11904698 chr2L 11904781 11904785 4 116 4.5 3.0 3.8 0.8 119 chr2L 11904666 intron Pde1c - chr2L 11904726 intron Pde1c - chr2L 11904785 intron Pde1c - chr2L_4_11900001 chr2L_11900001 RAL-383 362 chr2L 11906771 11906813 chr2L 11906873 11906915 12 101 2.0 2.5 2.2 3.8 144 chr2L 11906771 intron Pde1c - chr2L 11906843 intron Pde1c - chr2L 11906915 intron Pde1c - chr2L_12_11905001 chr2L_11905001 RAL-383 363 chr2L 11947360 11947398 chr2L 11947457 11947495 15 97 3.5 3.0 3.2 3.6 135 chr2L 11947360 intergenic Cry + chr2L 11947428 intergenic Cry + chr2L 11947495 intergenic Cry +,CG16964 + chr2L_15_11945001 chr2L_11945001 RAL-383 364 chr2L 11951312 11951365 chr2L 11951429 11951456 7 113 3.0 3.5 3.2 1.7 144 chr2L 11951312 intergenic not near genes chr2L 11951384 intergenic not near genes chr2L 11951456 intergenic not near genes chr2L_7_11950001 chr2L_11950001 RAL-383 365 chr2L 11951959 11951994 chr2L 11952067 11952102 16 108 0.0 4.0 2.0 5.3 143 chr2L 11951959 intergenic CR43314 - chr2L 11952030 intergenic CR43314 - chr2L 11952102 intergenic CR43314 - chr2L_16_11950001 chr2L_11950001 RAL-383 366 chr2L 11976072 11976117 chr2L 11976169 11976214 18 96 7.0 0.0 3.5 4.0 142 chr2L 11976072 intergenic not near genes chr2L 11976143 intergenic not near genes chr2L 11976214 intergenic not near genes chr2L_18_11975001 chr2L_11975001 RAL-383 367 chr2L 12046483 12046529 chr2L 12046627 12046673 11 139 1.5 2.5 2.0 3.7 190 chr2L 12046483 5` UTR CR44589 + chr2L 12046578 5` UTR CR44589 + chr2L 12046673 5` UTR CR44589 + chr2L_11_12045001 chr2L_12045001 RAL-383 368 chr2L 12067309 12067359 chr2L 12074381 12074431 297 12 7071 5.0 2.5 3.8 2.5 7122 chr2L 12067309 intergenic not near genes chr2L 12070870 intergenic not near genes chr2L 12074431 intergenic not near genes chr2L_12_12070001 chr2L_12070001 RAL-383 369 chr2L 12116855 12116886 chr2L 12116960 12116991 9 104 0.0 4.0 2.0 3.0 136 chr2L 12116855 intron CG17211 + chr2L 12116923 intron CG17211 + chr2L 12116991 intron CG17211 + chr2L_9_12115001 chr2L_12115001 RAL-383 370 chr2L 12121878 12121920 chr2L 12121980 12122021 17 101 3.5 2.0 2.8 4.5 143 chr2L 12121878 intron CG17211 + chr2L 12121950 intron CG17211 + chr2L 12122021 intron CG17211 + chr2L_17_12120001 chr2L_12120001 RAL-383 371 chr2L 12131453 12131497 chr2L 12131569 12131613 20 116 7.5 2.5 5.0 3.3 160 chr2L 12131453 intron rho-6 - chr2L 12131533 intron rho-6 - chr2L 12131613 intron rho-6 - chr2L_20_12130001 chr2L_12130001 RAL-383 372 chr2L 12132704 12132747 chr2L 12132810 12132853 11 105 0.5 4.5 2.5 3.1 149 chr2L 12132704 intron rho-6 - chr2L 12132778 intron rho-6 - chr2L 12132853 intron rho-6 - chr2L_11_12130001 chr2L_12130001 RAL-383 373 chr2L 12135953 12135974 chr2L 12136048 12136082 4 102 2.0 3.5 2.8 1.1 129 chr2L 12135953 intergenic not near genes chr2L 12136018 intergenic not near genes chr2L 12136082 intergenic not near genes chr2L_4_12135001 chr2L_12135001 RAL-383 374 chr2L 12144219 12144248 chr2L 12144786 12144815 9 567 3.5 7.0 5.2 1.5 596 chr2L 12144219 intron CG31760 + chr2L 12144517 intron CG31760 + chr2L 12144815 intron CG31760 + chr2L_9_12140001 chr2L_12140001 RAL-383 375 chr2L 12156837 12156848 chr2L 12156932 12156944 6 96 8.5 0.5 4.5 1.1 107 chr2L 12156837 intron CG31760 + chr2L 12156890 intron CG31760 + chr2L 12156944 intron CG31760 + chr2L_6_12155001 chr2L_12155001 RAL-383 376 chr2L 12179770 12179790 chr2L 12179856 12179890 9 100 3.5 2.5 3.0 2.2 120 chr2L 12179770 intron aret + chr2L 12179830 intron aret + chr2L 12179890 intron aret + chr2L_9_12175001 chr2L_12175001 RAL-383 377 chr2L 12203276 12203324 chr2L 12203377 12203415 9 98 1.0 3.5 2.2 2.8 139 chr2L 12203276 intron aret + chr2L 12203346 intron aret + chr2L 12203415 intron aret + chr2L_9_12200001 chr2L_12200001 RAL-383 378 chr2L 12269835 12269864 chr2L 12270070 12270099 10 235 4.0 5.0 4.5 1.8 264 chr2L 12269835 intron aret + chr2L 12269967 intron aret + chr2L 12270099 intron aret + chr2L_10_12265001 chr2L_12265001 RAL-383 379 chr2L 12272167 12272193 chr2L 12272247 12272289 14 94 0.5 4.5 2.5 4.0 122 chr2L 12272167 intron aret + chr2L 12272228 intron aret + chr2L 12272289 intron aret + chr2L_14_12270001 chr2L_12270001 RAL-383 380 chr2L 12294201 12294224 chr2L 12294353 12294376 8 152 3.0 3.0 3.0 2.0 175 chr2L 12294201 intron aret + chr2L 12294288 intron aret + chr2L 12294376 intron aret + chr2L_8_12290001 chr2L_12290001 RAL-383 381 chr2L 12299595 12299633 chr2L 12299692 12299728 9 96 7.0 3.0 5.0 1.5 133 chr2L 12299595 intron aret + chr2L 12299662 intron aret + chr2L 12299728 intron aret + chr2L_9_12295001 chr2L_12295001 RAL-383 382 chr2L 12309709 12309748 chr2L 12309811 12309860 7 108 5.0 0.0 2.5 2.0 151 chr2L 12309709 intron aret + chr2L 12309784 intron aret + chr2L 12309860 intron aret + chr2L_7_12305001 chr2L_12305001 RAL-383 383 chr2L 12337264 12337303 chr2L 12337372 12337410 10 108 1.5 0.0 0.8 5.6 146 chr2L 12337264 intergenic not near genes chr2L 12337337 intergenic not near genes chr2L 12337410 intergenic not near genes chr2L_10_12335001 chr2L_12335001 RAL-383 384 chr2L 12385893 12385932 chr2L 12386068 12386107 9 174 0.0 1.5 0.8 5.0 214 chr2L 12385893 intron bru-2 + chr2L 12386000 intron bru-2 + chr2L 12386107 intron bru-2 + chr2L_9_12385001 chr2L_12385001 RAL-383 385 chr2L 12436081 12436089 chr2L 12436182 12436190 5 99 12.5 6.0 9.2 0.5 109 chr2L 12436081 intron Elf + chr2L 12436136 intron Elf + chr2L 12436190 intron Elf + chr2L_5_12435001 chr2L_12435001 RAL-383 386 chr2L 12436099 12436130 chr2L 12436181 12436231 14 100 5.5 6.0 5.8 2.1 132 chr2L 12436099 intron Elf + chr2L 12436165 intron Elf + chr2L 12436231 intron Elf + chr2L_14_12435001 chr2L_12435001 RAL-383 387 chr2L 12473696 12473734 chr2L 12474887 12474931 9 1200 1.5 4.0 2.8 2.4 1235 chr2L 12473696 intron bun - chr2L 12474314 intron bun - chr2L 12474931 intron bun - chr2L_9_12470001 chr2L_12470001 RAL-383 388 chr2L 12487876 12487914 chr2L 12487983 12488024 11 108 3.5 6.0 4.8 1.9 148 chr2L 12487876 intron bun - chr2L 12487950 intron bun - chr2L 12488024 intron bun - chr2L_11_12485001 chr2L_12485001 RAL-383 389 chr2L 12510121 12510136 chr2L 12510218 12510235 7 94 10.5 9.0 9.8 0.6 114 chr2L 12510121 intron bun - chr2L 12510178 intron bun - chr2L 12510235 intron bun - chr2L_7_12510001 chr2L_12510001 RAL-383 390 chr2L 12515839 12515881 chr2L 12515936 12515978 5 97 3.0 5.5 4.2 1.0 139 chr2L 12515839 intron bun - chr2L 12515908 intron bun - chr2L 12515978 intron bun - chr2L_5_12515001 chr2L_12515001 RAL-383 391 chr2L 12558300 12558346 chr2L 12565449 12565495 HMS-Beagle 7 7147 3.0 1.5 2.2 2.2 7195 chr2L 12558300 intergenic not near genes chr2L 12561898 intergenic not near genes chr2L 12565495 intergenic not near genes chr2L_7_12560001 chr2L_12560001 RAL-383 392 chr2L 12570326 12570606 chr2L 12570427 12570711 7 105 2.0 0.0 1.0 3.5 385 chr2L 12570326 intergenic CR44598 - chr2L 12570518 intergenic CR44598 - chr2L 12570711 3` UTR CR44598 - chr2L_7_12570001 chr2L_12570001 RAL-383 393 chr2L 12583487 12583498 chr2L 12583599 12583610 4 112 3.0 0.0 1.5 1.6 123 chr2L 12583487 5` UTR CR44595 + chr2L 12583548 5` UTR CR44595 + chr2L 12583610 intergenic CR44595 + chr2L_4_12580001 chr2L_12580001 RAL-383 394 chr2L 12677698 12677726 chr2L 12677803 12677831 12 105 4.5 3.0 3.8 2.5 133 chr2L 12677698 intron pdm2 + chr2L 12677764 intron pdm2 + chr2L 12677831 intron pdm2 + chr2L_12_12675001 chr2L_12675001 RAL-383 395 chr2L 12693825 12693856 chr2L 12693920 12693943 15 96 4.5 0.0 2.2 4.7 118 chr2L 12693825 exon CG6153 + chr2L 12693884 3` UTR,3` UTR CG6153 +,CG5780 - chr2L 12693943 3` UTR CG5780 - chr2L_15_12690001 chr2L_12690001 RAL-383 396 chr2L 12728901 12728936 chr2L 12729161 12729196 pogo 8 260 4.5 2.5 3.5 1.8 295 chr2L 12728901 intron MRP + chr2L 12729048 intron MRP + chr2L 12729196 exon MRP + chr2L_8_12725001 chr2L_12725001 RAL-383 397 chr2L 12731047 12731092 chr2L 12735825 12735872 F-element 11 4783 6.0 2.5 4.2 2.1 4825 chr2L 12731047 intron MRP + chr2L 12733460 intron MRP + chr2L 12735872 intron MRP + chr2L_11_12730001 chr2L_12730001 RAL-383 398 chr2L 12739159 12739195 chr2L 12743960 12743996 Doc 16 4800 2.5 4.5 3.5 3.6 4837 chr2L 12739159 exon MRP + chr2L 12741578 intron MRP + chr2L 12743996 exon MRP + chr2L_16_12740001 chr2L_12740001 RAL-383 399 chr2L 12766741 12766779 chr2L 12766839 12766858 9 96 4.5 3.5 4.0 1.8 117 chr2L 12766741 intergenic not near genes chr2L 12766800 intergenic not near genes chr2L 12766858 intergenic not near genes chr2L_9_12765001 chr2L_12765001 RAL-383 400 chr2L 12769601 12769634 chr2L 12769726 12769734 6 113 3.0 2.0 2.5 1.7 133 chr2L 12769601 intergenic not near genes chr2L 12769668 intergenic not near genes chr2L 12769734 intergenic not near genes chr2L_6_12765001 chr2L_12765001 RAL-383 401 chr2L 12781789 12781812 chr2L 12789259 12789277 Quasimodo 5 7469 4.0 7.5 5.8 0.7 7488 chr2L 12781789 intergenic not near genes chr2L 12785533 intergenic not near genes chr2L 12789277 intergenic not near genes chr2L_5_12785001 chr2L_12785001 RAL-383 402 chr2L 12791602 12791627 chr2L 12795277 12795322 F-element 5 3689 1.0 4.5 2.8 1.3 3720 chr2L 12791602 intergenic not near genes chr2L 12793462 intergenic not near genes chr2L 12795322 intergenic not near genes chr2L_5_12790001 chr2L_12790001 RAL-383 403 chr2L 12861685 12861712 chr2L 12863167 12863179 hobo 6 1480 5.0 3.5 4.2 1.2 1494 chr2L 12861685 intergenic not near genes chr2L 12862432 intergenic not near genes chr2L 12863179 intergenic not near genes chr2L_6_12860001 chr2L_12860001 RAL-383 404 chr2L 12863894 12863948 chr2L 12863999 12864052 6 104 0.0 3.0 1.5 2.4 158 chr2L 12863894 intergenic not near genes chr2L 12863973 intergenic not near genes chr2L 12864052 intergenic not near genes chr2L_6_12860001 chr2L_12860001 RAL-383 405 chr2L 12894014 12894050 chr2L 12895490 12895506 hobo 6 1466 3.0 0.0 1.5 2.4 1492 chr2L 12894014 intergenic not near genes chr2L 12894760 intergenic not near genes chr2L 12895506 intergenic not near genes chr2L_6_12890001 chr2L_12890001 RAL-383 406 chr2L 12895483 12895513 chr2L 12895754 12895793 8 274 0.0 2.5 1.2 3.6 310 chr2L 12895483 intergenic not near genes chr2L 12895638 intergenic not near genes chr2L 12895793 intergenic not near genes chr2L_8_12895001 chr2L_12895001 RAL-383 407 chr2L 12896798 12896843 chr2L 12896899 12896917 6 98 3.5 1.0 2.2 1.9 119 chr2L 12896798 intergenic not near genes chr2L 12896858 intergenic not near genes chr2L 12896917 intergenic not near genes chr2L_6_12895001 chr2L_12895001 RAL-383 408 chr2L 12933844 12933878 chr2L 12941331 12941365 blood 13 7484 5.0 5.0 5.0 2.2 7521 chr2L 12933844 intergenic not near genes chr2L 12937604 intergenic not near genes chr2L 12941365 intergenic not near genes chr2L_13_12935001 chr2L_12935001 RAL-383 409 chr2L 12989031 12989062 chr2L 12989139 12989170 5 103 6.0 2.0 4.0 1.0 139 chr2L 12989031 intergenic not near genes chr2L 12989100 intergenic not near genes chr2L 12989170 intergenic not near genes chr2L_5_12985001 chr2L_12985001 RAL-383 410 chr2L 13036226 13036270 chr2L 13036486 13036532 X-element 17 262 2.5 3.5 3.0 4.2 306 chr2L 13036226 intron CG9932 - chr2L 13036379 intron CG9932 - chr2L 13036532 intron CG9932 - chr2L_17_13035001 chr2L_13035001 RAL-383 411 chr2L 13069311 13069362 chr2L 13069416 13069460 14 98 4.5 2.0 3.2 3.3 149 chr2L 13069311 intergenic not near genes chr2L 13069386 intergenic not near genes chr2L 13069460 intergenic not near genes chr2L_14_13065001 chr2L_13065001 RAL-383 412 chr2L 13073956 13073994 chr2L 13074063 13074101 6 104 0.0 2.0 1.0 3.0 145 chr2L 13073956 intergenic not near genes chr2L 13074028 intergenic not near genes chr2L 13074101 intergenic not near genes chr2L_6_13070001 chr2L_13070001 RAL-383 413 chr2L 13110191 13110209 chr2L 13110369 13110387 6 178 4.5 6.5 5.5 0.9 196 chr2L 13110191 intergenic not near genes chr2L 13110289 intergenic not near genes chr2L 13110387 intergenic not near genes chr2L_6_13110001 chr2L_13110001 RAL-383 414 chr2L 13147725 13147773 chr2L 13147821 13147869 7 96 2.5 3.0 2.8 1.8 144 chr2L 13147725 intergenic not near genes chr2L 13147797 intergenic not near genes chr2L 13147869 intergenic not near genes chr2L_7_13145001 chr2L_13145001 RAL-383 415 chr2L 13193342 13193352 chr2L 13193444 13193454 4 102 4.5 2.5 3.5 0.9 112 chr2L 13193342 intron Edem2 + chr2L 13193398 intron Edem2 + chr2L 13193454 intron Edem2 + chr2L_4_13190001 chr2L_13190001 RAL-383 416 chr2L 13241938 13241947 chr2L 13244342 13244351 BS 6 2404 1.0 0.0 0.5 4.0 2413 chr2L 13241938 5` UTR CR45330 + chr2L 13243144 intron CR45330 + chr2L 13244351 5` UTR CR45330 + chr2L_6_13240001 chr2L_13240001 RAL-383 417 chr2L 13255266 13255291 chr2L 13255429 13255454 4 163 0.0 1.0 0.5 2.7 188 chr2L 13255266 intron CG31728 + chr2L 13255360 intron CG31728 + chr2L 13255454 exon CG31728 + chr2L_4_13255001 chr2L_13255001 RAL-383 418 chr2L 13342036 13342077 chr2L 13342138 13342179 9 100 3.5 0.0 1.8 3.2 143 chr2L 13342036 intergenic not near genes chr2L 13342108 intergenic not near genes chr2L 13342179 intergenic not near genes chr2L_9_13340001 chr2L_13340001 RAL-383 419 chr2L 13405637 13405675 chr2L 13410447 13410491 Doc 6 4813 1.5 4.0 2.8 1.6 4854 chr2L 13405637 exon CG7110 + chr2L 13408064 intron CG7110 + chr2L 13410491 intron CG7110 + chr2L_6_13405001 chr2L_13405001 RAL-383 420 chr2L 13412312 13412352 chr2L 13412459 13412499 12 144 2.5 6.0 4.2 2.3 187 chr2L 13412312 intergenic CG16848 + chr2L 13412406 intergenic CG16848 + chr2L 13412499 intergenic CG16848 + chr2L_12_13410001 chr2L_13410001 RAL-383 421 chr2L 13421895 13421947 chr2L 13421993 13422037 10 96 1.5 2.0 1.8 3.6 142 chr2L 13421895 intron CG42784 + chr2L 13421966 intron CG42784 + chr2L 13422037 intron CG42784 + chr2L_10_13420001 chr2L_13420001 RAL-383 422 chr2L 13422342 13422391 chr2L 13422439 13422488 19 97 2.5 4.0 3.2 4.5 146 chr2L 13422342 intron CG42784 + chr2L 13422415 intron CG42784 + chr2L 13422488 intron CG42784 + chr2L_19_13420001 chr2L_13420001 RAL-383 423 chr2L 13449482 13449496 chr2L 13456936 13456952 Quasimodo 7 7454 3.0 7.5 5.2 1.1 7470 chr2L 13449482 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453217 intron CG42784 + chr2L 13456952 intron CG42784 + chr2L_7_13450001 chr2L_13450001 RAL-383 424 chr2L 13460143 13460201 chr2L 13460256 13460313 17 111 4.0 2.5 3.2 4.0 170 chr2L 13460143 intron,exon CG42784 +,CG42810 + chr2L 13460228 intron CG42784 + chr2L 13460313 intron CG42784 + chr2L_17_13460001 chr2L_13460001 RAL-383 425 chr2L 13481446 13481463 chr2L 13482073 13482090 jockey 7 627 4.0 6.5 5.2 1.1 644 chr2L 13481446 intron CG42784 + chr2L 13481768 intron CG42784 + chr2L 13482090 intron CG42784 + chr2L_7_13480001 chr2L_13480001 RAL-383 426 chr2L 13513950 13513995 chr2L 13518551 13518596 10 4599 4.0 5.0 4.5 1.8 4646 chr2L 13513950 intron B4 - chr2L 13516273 intron B4 - chr2L 13518596 intron B4 - chr2L_10_13515001 chr2L_13515001 RAL-383 427 chr2L 13560388 13560421 chr2L 13565229 13565262 F-element 13 4841 4.5 2.5 3.5 2.9 4874 chr2L 13560388 intron kuz + chr2L 13562825 intron kuz + chr2L 13565262 intron kuz + chr2L_13_13560001 chr2L_13560001 RAL-383 428 chr2L 13574149 13574196 chr2L 13574248 13574295 8 99 2.5 3.0 2.8 2.1 146 chr2L 13574149 intron kuz + chr2L 13574222 intron kuz + chr2L 13574295 intron kuz + chr2L_8_13570001 chr2L_13570001 RAL-383 429 chr2L 13600385 13600398 chr2L 13600665 13600678 6 280 0.0 8.5 4.2 1.2 293 chr2L 13600385 intron kuz + chr2L 13600532 intron kuz + chr2L 13600678 intron kuz + chr2L_6_13600001 chr2L_13600001 RAL-383 430 chr2L 13622186 13622232 chr2L 13622310 13622356 9 112 5.0 6.0 5.5 1.4 170 chr2L 13622186 intron kuz + chr2L 13622271 intron kuz + chr2L 13622356 intron kuz + chr2L_9_13620001 chr2L_13620001 RAL-383 431 chr2L 13684250 13684283 chr2L 13684346 13684379 5 96 1.0 4.0 2.5 1.4 129 chr2L 13684250 exon CG31814 - chr2L 13684314 intron CG31814 - chr2L 13684379 intron CG31814 - chr2L_5_13680001 chr2L_13680001 RAL-383 432 chr2L 13692168 13692220 chr2L 13692293 13692345 17 125 2.5 2.0 2.2 5.3 177 chr2L 13692168 intron CG31814 - chr2L 13692256 intron CG31814 - chr2L 13692345 intron CG31814 - chr2L_17_13690001 chr2L_13690001 RAL-383 433 chr2L 13693006 13693041 chr2L 13693082 13693133 8 88 4.0 4.5 4.2 1.5 127 chr2L 13693006 intron CG31814 - chr2L 13693070 intron CG31814 - chr2L 13693133 intron CG31814 - chr2L_8_13690001 chr2L_13690001 RAL-383 434 chr2L 13713239 13713537 chr2L 13713371 13713633 11 119 3.5 3.0 3.2 2.6 394 chr2L 13713239 intron CG31814 - chr2L 13713436 intron CG31814 - chr2L 13713633 intron CG31814 - chr2L_11_13710001 chr2L_13710001 RAL-383 435 chr2L 13713541 13713571 chr2L 13713634 13713667 10 96 1.0 0.0 0.5 6.7 126 chr2L 13713541 intron CG31814 - chr2L 13713604 intron CG31814 - chr2L 13713667 intron CG31814 - chr2L_10_13710001 chr2L_13710001 RAL-383 436 chr2L 13749194 13749201 chr2L 13749297 13749304 6 103 0.0 0.0 0.0 6.0 110 chr2L 13749194 intron,intron CR44846 +,TM9SF4 + chr2L 13749249 intron,intron CR44846 +,TM9SF4 + chr2L 13749304 intron,intron CR44846 +,TM9SF4 + chr2L_6_13745001 chr2L_13745001 RAL-383 437 chr2L 13761785 13761796 chr2L 13762916 13762927 Doc 5 1131 10.0 5.5 7.8 0.6 1142 chr2L 13761785 intron TM9SF4 + chr2L 13762356 intron TM9SF4 + chr2L 13762927 intron TM9SF4 + chr2L_5_13760001 chr2L_13760001 RAL-383 438 chr2L 13761797 13761825 chr2L 13762915 13762956 Doc 13 1129 5.5 5.0 5.2 2.1 1159 chr2L 13761797 intron TM9SF4 + chr2L 13762376 intron TM9SF4 + chr2L 13762956 intron TM9SF4 + chr2L_13_13760001 chr2L_13760001 RAL-383 439 chr2L 13836784 13836826 chr2L 13837000 13837004 12 213 3.5 5.5 4.5 2.2 220 chr2L 13836784 intron CenG1A + chr2L 13836894 intron CenG1A + chr2L 13837004 intron CenG1A + chr2L_12_13835001 chr2L_13835001 RAL-383 440 chr2L 13842111 13842163 chr2L 13842215 13842267 14 104 3.0 0.5 1.8 5.0 156 chr2L 13842111 intron CenG1A + chr2L 13842189 intron CenG1A + chr2L 13842267 intron CenG1A + chr2L_14_13840001 chr2L_13840001 RAL-383 441 chr2L 13853074 13853083 chr2L 13862242 13862253 roo 5 9169 10.5 5.0 7.8 0.6 9179 chr2L 13853074 intron CenG1A + chr2L 13857664 intron CenG1A + chr2L 13862253 intron CenG1A + chr2L_5_13855001 chr2L_13855001 RAL-383 442 chr2L 13853092 13853107 chr2L 13862237 13862277 roo 8 9166 5.5 4.0 4.8 1.4 9185 chr2L 13853092 intron CenG1A + chr2L 13857684 intron CenG1A + chr2L 13862277 intron CenG1A + chr2L_8_13855001 chr2L_13855001 RAL-383 443 chr2L 13914798 13914839 chr2L 13914898 13914939 9 100 4.5 3.0 3.8 1.9 141 chr2L 13914798 5` UTR Ance-3 + chr2L 13914868 5` UTR Ance-3 + chr2L 13914939 5` UTR Ance-3 + chr2L_9_13910001 chr2L_13910001 RAL-383 444 chr2L 13972643 13972673 chr2L 13972750 13972780 4 107 4.5 5.0 4.8 0.7 137 chr2L 13972643 intron He - chr2L 13972712 intron He - chr2L 13972780 intron He - chr2L_4_13970001 chr2L_13970001 RAL-383 445 chr2L 13973965 13973974 chr2L 13974081 13974086 6 116 5.0 0.0 2.5 1.7 121 chr2L 13973965 3` UTR NimC1 - chr2L 13974026 3` UTR NimC1 - chr2L 13974086 3` UTR NimC1 - chr2L_6_13970001 chr2L_13970001 RAL-383 446 chr2L 13988261 13988302 chr2L 13988368 13988409 15 105 2.0 5.5 3.8 3.1 148 chr2L 13988261 intron rk - chr2L 13988335 intron rk - chr2L 13988409 intron rk - chr2L_15_13985001 chr2L_13985001 RAL-383 447 chr2L 14011267 14011275 chr2L 14011363 14011371 6 96 4.5 2.5 3.5 1.3 104 chr2L 14011267 intergenic not near genes chr2L 14011319 intergenic not near genes chr2L 14011371 intergenic not near genes chr2L_6_14010001 chr2L_14010001 RAL-383 448 chr2L 14085797 14085817 chr2L 14085918 14085952 8 134 4.5 2.0 3.2 1.9 155 chr2L 14085797 intron nAChRalpha5 + chr2L 14085874 intron nAChRalpha5 + chr2L 14085952 intron nAChRalpha5 + chr2L_8_14085001 chr2L_14085001 RAL-383 449 chr2L 14096144 14096152 chr2L 14096254 14096257 5 109 5.0 0.0 2.5 1.4 113 chr2L 14096144 intergenic not near genes chr2L 14096200 intergenic not near genes chr2L 14096257 intergenic not near genes chr2L_5_14095001 chr2L_14095001 RAL-383 450 chr2L 14118643 14118671 chr2L 14118762 14118789 9 119 5.5 8.0 6.8 1.2 146 chr2L 14118643 intergenic not near genes chr2L 14118716 intergenic not near genes chr2L 14118789 intergenic not near genes chr2L_9_14115001 chr2L_14115001 RAL-383 451 chr2L 14118672 14118691 chr2L 14118759 14118810 9 115 2.5 8.0 5.2 1.5 138 chr2L 14118672 intergenic not near genes chr2L 14118741 intergenic not near genes chr2L 14118810 intergenic not near genes chr2L_9_14115001 chr2L_14115001 RAL-383 452 chr2L 14135216 14135253 chr2L 14135317 14135354 10 99 2.5 0.0 1.2 4.5 138 chr2L 14135216 intron CG17341 + chr2L 14135285 intron CG17341 + chr2L 14135354 intron CG17341 + chr2L_10_14135001 chr2L_14135001 RAL-383 453 chr2L 14149716 14149745 chr2L 14149813 14149842 9 94 7.0 2.5 4.8 1.6 126 chr2L 14149716 intron CG17341 + chr2L 14149779 intron CG17341 + chr2L 14149842 intron CG17341 + chr2L_9_14145001 chr2L_14145001 RAL-383 454 chr2L 14160675 14160689 chr2L 14160781 14160795 9 106 5.5 6.0 5.8 1.3 120 chr2L 14160675 intergenic CG17341 +,CG43332 - chr2L 14160735 intergenic CG17341 +,CG43332 - chr2L 14160795 intergenic CG17341 +,CG43332 - chr2L_9_14160001 chr2L_14160001 RAL-383 455 chr2L 14160690 14160719 chr2L 14160779 14160824 10 104 1.5 5.5 3.5 2.2 134 chr2L 14160690 intergenic CG17341 +,CG43332 - chr2L 14160757 intergenic CG17341 +,CG43332 - chr2L 14160824 intergenic CG17341 +,CG43332 - chr2L_10_14160001 chr2L_14160001 RAL-383 456 chr2L 14180045 14180090 chr2L 14180141 14180186 13 96 5.0 8.5 6.8 1.7 141 chr2L 14180045 intron CG43333 - chr2L 14180116 intron CG43333 - chr2L 14180186 intron CG43333 - chr2L_13_14180001 chr2L_14180001 RAL-383 457 chr2L 14229606 14229634 chr2L 14229719 14229746 5 112 0.0 2.5 1.2 2.3 140 chr2L 14229606 intron Dyrk2 - chr2L 14229676 intron Dyrk2 - chr2L 14229746 intron Dyrk2 - chr2L_5_14225001 chr2L_14225001 RAL-383 458 chr2L 14291644 14291692 chr2L 14291745 14291794 20 101 4.0 3.5 3.8 4.2 150 chr2L 14291644 intron,5` UTR wb +,CR43639 + chr2L 14291719 intron,5` UTR wb +,CR43639 + chr2L 14291794 intron,5` UTR wb +,CR43639 + chr2L_20_14290001 chr2L_14290001 RAL-383 459 chr2L 14374759 14374806 chr2L 14374870 14374917 24 110 6.0 3.5 4.8 4.1 158 chr2L 14374759 intergenic not near genes chr2L 14374838 intergenic not near genes chr2L 14374917 intergenic not near genes chr2L_24_14370001 chr2L_14370001 RAL-383 460 chr2L 14403105 14403149 chr2L 14403217 14403248 10 105 2.0 3.0 2.5 2.9 143 chr2L 14403105 intron elB - chr2L 14403176 intron elB - chr2L 14403248 intron elB - chr2L_10_14400001 chr2L_14400001 RAL-383 461 chr2L 14406942 14406976 chr2L 14407030 14407072 11 94 0.5 4.5 2.5 3.1 130 chr2L 14406942 intron elB - chr2L 14407007 intron elB - chr2L 14407072 intron elB - chr2L_11_14405001 chr2L_14405001 RAL-383 462 chr2L 14423949 14423996 chr2L 14424898 14424945 16 954 41.0 27.0 34.0 0.5 996 chr2L 14423949 intergenic Cpr35B - chr2L 14424447 exon Cpr35B - chr2L 14424945 exon Cpr35B - chr2L_16_14420001 chr2L_14420001 RAL-383 463 chr2L 14427781 14427835 chr2L 14428008 14428042 10 220 2.0 6.0 4.0 2.0 261 chr2L 14427781 intergenic not near genes chr2L 14427912 intergenic not near genes chr2L 14428042 intergenic not near genes chr2L_10_14425001 chr2L_14425001 RAL-383 464 chr2L 14465592 14465616 chr2L 14469089 14469113 hopper2 12 3495 3.0 1.0 2.0 4.0 3521 chr2L 14465592 intergenic not near genes chr2L 14467352 intergenic not near genes chr2L 14469113 intergenic not near genes chr2L_12_14465001 chr2L_14465001 RAL-383 465 chr2L 14525572 14525598 chr2L 14525674 14525700 7 102 2.0 5.0 3.5 1.6 128 chr2L 14525572 exon CG33648 + chr2L 14525636 3` UTR CG33648 + chr2L 14525700 intergenic CG33648 + chr2L_7_14525001 chr2L_14525001 RAL-383 466 chr2L 14549134 14549173 chr2L 14549229 14549268 17 94 1.5 4.0 2.8 4.5 134 chr2L 14549134 intergenic CG4218 - chr2L 14549201 intergenic CG4218 - chr2L 14549268 intergenic CG4218 - chr2L_17_14545001 chr2L_14545001 RAL-383 467 chr2L 14555128 14555158 chr2L 14555227 14555257 7 99 5.0 3.5 4.2 1.3 129 chr2L 14555128 intergenic not near genes chr2L 14555192 intergenic not near genes chr2L 14555257 intergenic not near genes chr2L_7_14555001 chr2L_14555001 RAL-383 468 chr2L 14588365 14588420 chr2L 14588539 14588594 16 168 3.5 1.5 2.5 4.6 229 chr2L 14588365 intergenic CG42680 - chr2L 14588480 intergenic CG42680 - chr2L 14588594 intergenic CG42680 - chr2L_16_14585001 chr2L_14585001 RAL-383 469 chr2L 14601958 14601993 chr2L 14602062 14602097 8 100 5.0 4.0 4.5 1.5 139 chr2L 14601958 exon osp - chr2L 14602028 intron osp - chr2L 14602097 intron osp - chr2L_8_14600001 chr2L_14600001 RAL-383 470 chr2L 14707205 14707238 chr2L 14707344 14707360 5 133 4.0 0.5 2.2 1.6 155 chr2L 14707205 intergenic not near genes chr2L 14707282 intergenic not near genes chr2L 14707360 intergenic not near genes chr2L_5_14705001 chr2L_14705001 RAL-383 471 chr2L 14716597 14716634 chr2L 14716687 14716732 9 96 2.0 2.0 2.0 3.0 135 chr2L 14716597 intergenic not near genes chr2L 14716664 intergenic not near genes chr2L 14716732 intergenic not near genes chr2L_9_14715001 chr2L_14715001 RAL-383 472 chr2L 14761890 14761904 chr2L 14762009 14762023 4 119 1.5 2.0 1.8 1.4 133 chr2L 14761890 3` UTR CG4691 + chr2L 14761956 intergenic CR44858 +,CG4691 + chr2L 14762023 5` UTR CR44858 + chr2L_4_14760001 chr2L_14760001 RAL-383 473 chr2L 14768916 14768956 chr2L 14769014 14769054 5 98 0.0 2.0 1.0 2.5 138 chr2L 14768916 intergenic not near genes chr2L 14768985 intergenic not near genes chr2L 14769054 intergenic not near genes chr2L_5_14765001 chr2L_14765001 RAL-383 474 chr2L 14794265 14794316 chr2L 14794499 14794529 13 232 5.0 7.0 6.0 1.9 264 chr2L 14794265 intergenic CG18420 - chr2L 14794397 intergenic CG18420 - chr2L 14794529 3` UTR CG18420 - chr2L_13_14790001 chr2L_14790001 RAL-383 475 chr2L 14803858 14803912 chr2L 14809081 14809119 copia 12 5220 3.5 3.5 3.5 2.7 5261 chr2L 14803858 intergenic not near genes chr2L 14806488 intergenic not near genes chr2L 14809119 intergenic not near genes chr2L_12_14805001 chr2L_14805001 RAL-383 476 chr2L 14833771 14833823 chr2L 14833895 14833947 18 122 2.0 0.5 1.2 8.2 176 chr2L 14833771 intergenic not near genes chr2L 14833859 intergenic not near genes chr2L 14833947 intergenic not near genes chr2L_18_14830001 chr2L_14830001 RAL-383 477 chr2L 14840955 14841002 chr2L 14841063 14841109 7 105 6.0 2.5 4.2 1.3 154 chr2L 14840955 3` UTR CR43805 - chr2L 14841032 3` UTR CR43805 - chr2L 14841109 3` UTR CR43805 - chr2L_7_14840001 chr2L_14840001 RAL-383 478 chr2L 14858551 14858588 chr2L 14858651 14858689 6 98 4.5 2.0 3.2 1.4 138 chr2L 14858551 intergenic not near genes chr2L 14858620 intergenic not near genes chr2L 14858689 intergenic not near genes chr2L_6_14855001 chr2L_14855001 RAL-383 479 chr2L 14884655 14884693 chr2L 14884752 14884790 4 97 2.0 1.5 1.8 1.4 135 chr2L 14884655 intergenic CR45302 + chr2L 14884722 intergenic CR45302 + chr2L 14884790 intergenic CR45302 + chr2L_4_14880001 chr2L_14880001 RAL-383 480 chr2L 14889950 14889986 chr2L 14890390 14890400 jockey 12 442 3.0 4.0 3.5 2.7 450 chr2L 14889950 intergenic not near genes chr2L 14890175 intergenic not near genes chr2L 14890400 intergenic not near genes chr2L_12_14890001 chr2L_14890001 RAL-383 481 chr2L 14902143 14902190 chr2L 14904204 14904251 13 2059 6.5 1.0 3.8 2.7 2108 chr2L 14902143 intergenic not near genes chr2L 14903197 intergenic not near genes chr2L 14904251 intergenic not near genes chr2L_13_14900001 chr2L_14900001 RAL-383 482 chr2L 14939637 14939669 chr2L 14939783 14939816 10 145 4.5 4.0 4.2 1.9 179 chr2L 14939637 intron CG42313 - chr2L 14939726 intron CG42313 - chr2L 14939816 intron CG42313 - chr2L_10_14935001 chr2L_14935001 RAL-383 483 chr2L 14945416 14945461 chr2L 14945532 14945577 7 116 4.0 1.0 2.5 2.0 161 chr2L 14945416 intron CG42313 - chr2L 14945496 intron CG42313 - chr2L 14945577 intron CG42313 - chr2L_7_14945001 chr2L_14945001 RAL-383 484 chr2L 14968529 14968581 chr2L 14969059 14969111 13 530 1.0 0.5 0.8 7.2 582 chr2L 14968529 intron CG42313 - chr2L 14968820 intron CG42313 - chr2L 14969111 intron CG42313 - chr2L_13_14965001 chr2L_14965001 RAL-383 485 chr2L 14984366 14984371 chr2L 14991988 14991993 opus 4 7622 6.0 2.0 4.0 0.8 7627 chr2L 14984366 intron mol - chr2L 14988180 intron mol - chr2L 14991993 intron mol - chr2L_4_14985001 chr2L_14985001 RAL-383 486 chr2L 14984380 14984391 chr2L 14991981 14992013 opus 5 7618 4.5 2.0 3.2 1.2 7633 chr2L 14984380 intron mol - chr2L 14988196 intron mol - chr2L 14992013 intron mol - chr2L_5_14985001 chr2L_14985001 RAL-383 487 chr2L 14996411 14996460 chr2L 14996511 14996566 15 103 3.0 5.0 4.0 3.0 155 chr2L 14996411 intron mol - chr2L 14996488 intron mol - chr2L 14996566 intron mol - chr2L_15_14995001 chr2L_14995001 RAL-383 488 chr2L 14999953 15000005 chr2L 15000108 15000161 13 154 3.5 5.0 4.2 2.5 208 chr2L 14999953 intergenic not near genes chr2L 15000057 intergenic not near genes chr2L 15000161 intergenic not near genes chr2L_13_15000001 chr2L_15000001 RAL-383 489 chr2L 15024070 15024113 chr2L 15024166 15024209 18 95 5.5 3.5 4.5 3.3 139 chr2L 15024070 intron GABA-B-R1 + chr2L 15024140 intron GABA-B-R1 + chr2L 15024209 intron GABA-B-R1 + chr2L_18_15020001 chr2L_15020001 RAL-383 490 chr2L 15066578 15066601 chr2L 15066676 15066713 6 103 4.5 3.5 4.0 1.2 135 chr2L 15066578 intron,intron vas +,vig - chr2L 15066646 intron,intron vas +,vig - chr2L 15066713 intron,intron vas +,vig - chr2L_6_15065001 chr2L_15065001 RAL-383 491 chr2L 15087749 15087769 chr2L 15087878 15087899 8 128 3.0 5.5 4.2 1.5 150 chr2L 15087749 exon CG15270 + chr2L 15087824 intron CG15270 + chr2L 15087899 intron CG15270 + chr2L_8_15085001 chr2L_15085001 RAL-383 492 chr2L 15103849 15103861 chr2L 15103966 15103978 4 117 5.5 11.5 8.5 0.4 129 chr2L 15103849 intergenic not near genes chr2L 15103914 intergenic not near genes chr2L 15103978 intergenic not near genes chr2L_4_15100001 chr2L_15100001 RAL-383 493 chr2L 15142013 15142064 chr2L 15142112 15142163 13 98 2.0 4.5 3.2 3.1 150 chr2L 15142013 intergenic not near genes chr2L 15142088 intergenic not near genes chr2L 15142163 intergenic not near genes chr2L_13_15140001 chr2L_15140001 RAL-383 494 chr2L 15226347 15226395 chr2L 15226443 15226490 8 90 1.0 4.5 2.8 2.1 143 chr2L 15226347 intergenic not near genes chr2L 15226418 intergenic not near genes chr2L 15226490 intergenic not near genes chr2L_8_15225001 chr2L_15225001 RAL-383 495 chr2L 15242650 15242655 chr2L 15242735 15242772 4 109 0.0 3.5 1.8 1.4 122 chr2L 15242650 intron ZnT35C - chr2L 15242711 intron ZnT35C - chr2L 15242772 intron ZnT35C - chr2L_4_15240001 chr2L_15240001 RAL-383 496 chr2L 15252961 15253007 chr2L 15253060 15253106 17 98 3.5 2.5 3.0 4.2 145 chr2L 15252961 intron dao + chr2L 15253034 intron dao + chr2L 15253106 intron dao + chr2L_17_15250001 chr2L_15250001 RAL-383 497 chr2L 15313735 15313773 chr2L 15313861 15313914 5 125 3.5 3.0 3.2 1.2 179 chr2L 15313735 intergenic not near genes chr2L 15313824 intergenic not near genes chr2L 15313914 intergenic not near genes chr2L_5_15310001 chr2L_15310001 RAL-383 498 chr2L 15350884 15350930 chr2L 15350988 15351034 12 104 1.0 2.0 1.5 4.8 150 chr2L 15350884 intergenic not near genes chr2L 15350959 intergenic not near genes chr2L 15351034 intergenic not near genes chr2L_12_15350001 chr2L_15350001 RAL-383 499 chr2L 15375211 15375265 chr2L 15375345 15375399 14 131 2.5 0.0 1.2 6.4 188 chr2L 15375211 intergenic not near genes chr2L 15375305 intergenic not near genes chr2L 15375399 intergenic not near genes chr2L_14_15375001 chr2L_15375001 RAL-383 500 chr2L 15375803 15375842 chr2L 15375935 15375974 8 132 3.5 3.0 3.2 1.9 171 chr2L 15375803 intergenic not near genes chr2L 15375888 intergenic not near genes chr2L 15375974 intergenic not near genes chr2L_8_15375001 chr2L_15375001 RAL-383 501 chr2L 15385261 15385302 chr2L 15385532 15385574 14 267 3.5 0.0 1.8 5.0 313 chr2L 15385261 intergenic not near genes chr2L 15385418 intergenic not near genes chr2L 15385574 intergenic not near genes chr2L_14_15385001 chr2L_15385001 RAL-383 502 chr2L 15387397 15387407 chr2L 15387452 15387507 4 89 2.0 0.0 1.0 2.0 110 chr2L 15387397 intergenic not near genes chr2L 15387452 intergenic not near genes chr2L 15387507 intergenic not near genes chr2L_4_15385001 chr2L_15385001 RAL-383 503 chr2L 15393754 15393765 chr2L 15393854 15393865 6 100 0.5 3.0 1.8 2.1 111 chr2L 15393754 intergenic not near genes chr2L 15393810 intergenic not near genes chr2L 15393865 intergenic not near genes chr2L_6_15390001 chr2L_15390001 RAL-383 504 chr2L 15394159 15394186 chr2L 15394265 15394292 7 106 3.5 0.0 1.8 2.5 133 chr2L 15394159 intergenic not near genes chr2L 15394226 intergenic not near genes chr2L 15394292 intergenic not near genes chr2L_7_15390001 chr2L_15390001 RAL-383 505 chr2L 15396243 15396258 chr2L 15396340 15396355 7 96 7.0 0.0 3.5 1.6 112 chr2L 15396243 intergenic CR44859 + chr2L 15396299 intergenic CR44859 + chr2L 15396355 5` UTR CR44859 + chr2L_7_15395001 chr2L_15395001 RAL-383 506 chr2L 15446048 15446083 chr2L 15453537 15453563 blood 8 7486 1.0 2.5 1.8 2.9 7515 chr2L 15446048 intergenic not near genes chr2L 15449806 intergenic not near genes chr2L 15453563 intergenic not near genes chr2L_8_15445001 chr2L_15445001 RAL-383 507 chr2L 15471238 15471284 chr2L 15471350 15471396 11 112 2.0 1.5 1.8 3.9 158 chr2L 15471238 intergenic not near genes chr2L 15471317 intergenic not near genes chr2L 15471396 intergenic not near genes chr2L_11_15470001 chr2L_15470001 RAL-383 508 chr2L 15476395 15476420 chr2L 15476574 15476599 7 178 4.0 4.0 4.0 1.4 204 chr2L 15476395 intergenic sna - chr2L 15476497 intergenic sna - chr2L 15476599 3` UTR sna - chr2L_7_15475001 chr2L_15475001 RAL-383 509 chr2L 15482561 15482602 chr2L 15482718 15482759 5 157 4.0 0.0 2.0 1.7 198 chr2L 15482561 intergenic not near genes chr2L 15482660 intergenic not near genes chr2L 15482759 intergenic not near genes chr2L_5_15480001 chr2L_15480001 RAL-383 510 chr2L 15483262 15483314 chr2L 15483368 15483420 7 106 3.0 1.0 2.0 2.3 158 chr2L 15483262 intergenic not near genes chr2L 15483341 intergenic not near genes chr2L 15483420 intergenic not near genes chr2L_7_15480001 chr2L_15480001 RAL-383 511 chr2L 15490026 15490044 chr2L 15490162 15490180 11 136 0.0 5.0 2.5 3.1 154 chr2L 15490026 intergenic not near genes chr2L 15490103 intergenic not near genes chr2L 15490180 intergenic not near genes chr2L_11_15490001 chr2L_15490001 RAL-383 512 chr2L 15499891 15499940 chr2L 15499999 15500047 9 108 6.5 2.5 4.5 1.6 156 chr2L 15499891 intron lace + chr2L 15499969 intron lace + chr2L 15500047 intron lace + chr2L_9_15495001 chr2L_15495001 RAL-383 513 chr2L 15521614 15521652 chr2L 15521717 15521755 11 103 2.0 5.0 3.5 2.4 141 chr2L 15521614 intergenic CR43761 + chr2L 15521684 intergenic CR43761 + chr2L 15521755 intergenic CR43761 + chr2L_11_15520001 chr2L_15520001 RAL-383 514 chr2L 15527412 15527460 chr2L 15527510 15527559 10 98 0.5 1.0 0.8 5.6 147 chr2L 15527412 intergenic not near genes chr2L 15527486 intergenic not near genes chr2L 15527559 intergenic not near genes chr2L_10_15525001 chr2L_15525001 RAL-383 515 chr2L 15533262 15533288 chr2L 15533339 15533360 4 80 3.5 2.0 2.8 1.1 98 chr2L 15533262 intergenic not near genes chr2L 15533311 intergenic not near genes chr2L 15533360 intergenic not near genes chr2L_4_15530001 chr2L_15530001 RAL-383 516 chr2L 15541326 15541378 chr2L 15541428 15541475 23 98 2.0 2.0 2.0 7.7 149 chr2L 15541326 intergenic not near genes chr2L 15541400 intergenic not near genes chr2L 15541475 intergenic not near genes chr2L_23_15540001 chr2L_15540001 RAL-383 517 chr2L 15555179 15555204 chr2L 15555326 15555351 8 147 3.0 4.5 3.8 1.7 172 chr2L 15555179 intron kek3 + chr2L 15555265 intron kek3 + chr2L 15555351 intron kek3 + chr2L_8_15555001 chr2L_15555001 RAL-383 518 chr2L 15584286 15584304 chr2L 15584362 15584403 8 92 2.0 2.5 2.2 2.5 117 chr2L 15584286 intergenic kek3 + chr2L 15584344 intergenic kek3 + chr2L 15584403 intergenic kek3 + chr2L_8_15580001 chr2L_15580001 RAL-383 519 chr2L 15586389 15586440 chr2L 15593461 15593510 297 17 7071 6.5 3.0 4.8 2.9 7121 chr2L 15586389 intergenic not near genes chr2L 15589950 intergenic not near genes chr2L 15593510 intergenic not near genes chr2L_17_15585001 chr2L_15585001 RAL-383 520 chr2L 15598748 15598798 chr2L 15598847 15598897 10 98 3.5 0.5 2.0 3.3 149 chr2L 15598748 intergenic not near genes chr2L 15598822 intergenic not near genes chr2L 15598897 intergenic not near genes chr2L_10_15595001 chr2L_15595001 RAL-383 521 chr2L 15628392 15628400 chr2L 15628487 15628496 5 96 0.0 3.0 1.5 2.0 104 chr2L 15628392 intergenic CG7631 + chr2L 15628444 intergenic CG7631 + chr2L 15628496 intergenic CG7631 + chr2L_5_15625001 chr2L_15625001 RAL-383 522 chr2L 15649922 15649957 chr2L 15650021 15650056 5 99 3.0 2.0 2.5 1.4 134 chr2L 15649922 intron CG4587 - chr2L 15649989 intron CG4587 - chr2L 15650056 intron CG4587 - chr2L_5_15645001 chr2L_15645001 RAL-383 523 chr2L 15790166 15790213 chr2L 15790262 15790307 15 94 5.0 4.0 4.5 2.7 141 chr2L 15790166 intergenic CG18109 + chr2L 15790236 intergenic CG18109 + chr2L 15790307 intergenic CG18109 + chr2L_15_15790001 chr2L_15790001 RAL-383 524 chr2L 15823338 15823365 chr2L 15823434 15823461 7 96 4.5 1.5 3.0 1.8 123 chr2L 15823338 intergenic CR44601 - chr2L 15823400 intergenic CR44601 - chr2L 15823461 intergenic not near genes chr2L_7_15820001 chr2L_15820001 RAL-383 525 chr2L 15826876 15826886 chr2L 15829290 15829300 Tabor 4 2414 4.0 7.0 5.5 0.6 2424 chr2L 15826876 intergenic not near genes chr2L 15828088 intergenic not near genes chr2L 15829300 intergenic not near genes chr2L_4_15825001 chr2L_15825001 RAL-383 526 chr2L 15935176 15935222 chr2L 15935280 15935326 11 107 4.0 0.5 2.2 3.4 150 chr2L 15935176 intron beat-Ib - chr2L 15935251 intron beat-Ib - chr2L 15935326 intron beat-Ib - chr2L_11_15935001 chr2L_15935001 RAL-383 527 chr2L 15950375 15950395 chr2L 15950473 15950493 8 98 4.5 0.5 2.5 2.3 118 chr2L 15950375 intron beat-Ib - chr2L 15950434 intron beat-Ib - chr2L 15950493 intron beat-Ib - chr2L_8_15950001 chr2L_15950001 RAL-383 528 chr2L 15956009 15956052 chr2L 15957496 15957539 hobo 15 1486 4.5 4.5 4.5 2.7 1530 chr2L 15956009 intron beat-Ib - chr2L 15956774 intron beat-Ib - chr2L 15957539 intron beat-Ib - chr2L_15_15955001 chr2L_15955001 RAL-383 529 chr2L 16005546 16005592 chr2L 16005668 16005714 15 121 2.5 3.0 2.8 3.9 168 chr2L 16005546 intron beat-Ic + chr2L 16005630 intron beat-Ic + chr2L 16005714 intron beat-Ic + chr2L_15_16005001 chr2L_16005001 RAL-383 530 chr2L 16008683 16008690 chr2L 16008804 16008811 4 121 0.0 2.5 1.2 1.8 128 chr2L 16008683 intron beat-Ic + chr2L 16008747 intron beat-Ic + chr2L 16008811 intron beat-Ic + chr2L_4_16005001 chr2L_16005001 RAL-383 531 chr2L 16069282 16069297 chr2L 16069345 16069399 9 89 1.0 5.5 3.2 2.1 117 chr2L 16069282 intron beat-Ia + chr2L 16069340 intron beat-Ia + chr2L 16069399 intron beat-Ia + chr2L_9_16065001 chr2L_16065001 RAL-383 532 chr2L 8578452 8578452 chr2L 16071771 16071771 6 7493319 15.5 17.0 16.2 0.3 7493319 chr2L 8578452 intron Sema-1a + chr2L 12325112 intergenic not near genes chr2L 16071771 intron beat-Ia + chr2L_6_12325001 chr2L_12325001 RAL-383 533 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 19 145889 16.5 16.0 16.2 1.1 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_19_16140001 chr2L_16140001 RAL-383 534 chr2L 16098905 16098949 chr2L 16099013 16099057 12 105 5.0 4.0 4.5 2.2 152 chr2L 16098905 intergenic not near genes chr2L 16098981 intergenic not near genes chr2L 16099057 intergenic not near genes chr2L_12_16095001 chr2L_16095001 RAL-383 535 chr2L 16141147 16141192 chr2L 16146374 16146419 copia 10 5226 5.0 1.5 3.2 2.4 5272 chr2L 16141147 intergenic not near genes chr2L 16143783 intergenic not near genes chr2L 16146419 intergenic not near genes chr2L_10_16140001 chr2L_16140001 RAL-383 536 chr2L 16153723 16153761 chr2L 16160811 16160849 297 9 7085 2.5 4.0 3.2 2.1 7126 chr2L 16153723 intergenic not near genes chr2L 16157286 intergenic not near genes chr2L 16160849 intergenic not near genes chr2L_9_16155001 chr2L_16155001 RAL-383 537 chr2L 16207053 16207091 chr2L 16207150 16207187 8 97 1.5 2.5 2.0 2.7 134 chr2L 16207053 intergenic not near genes chr2L 16207120 intergenic not near genes chr2L 16207187 intergenic not near genes chr2L_8_16205001 chr2L_16205001 RAL-383 538 chr2L 16210483 16210514 chr2L 16210582 16210613 11 99 0.0 3.5 1.8 3.9 130 chr2L 16210483 intergenic not near genes chr2L 16210548 intergenic not near genes chr2L 16210613 intergenic not near genes chr2L_11_16210001 chr2L_16210001 RAL-383 539 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 10 145889 16.5 16.0 16.2 0.6 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_10_16140001 chr2L_16140001 RAL-383 540 chr2L 16280235 16280285 chr2L 16281426 16281476 1360 12 1184 3.5 4.0 3.8 2.5 1241 chr2L 16280235 intron crp - chr2L 16280856 intron crp - chr2L 16281476 intron crp - chr2L_12_16280001 chr2L_16280001 RAL-383 541 chr2L 16354759 16354784 chr2L 16354871 16354895 8 111 2.5 2.0 2.2 2.5 136 chr2L 16354759 intergenic CaBP1 -,CG4455 + chr2L 16354827 intergenic CaBP1 -,CG4455 + chr2L 16354895 3` UTR CaBP1 - chr2L_8_16350001 chr2L_16350001 RAL-383 542 chr2L 16363923 16363968 chr2L 16364189 16364234 8 266 3.5 2.0 2.8 2.1 311 chr2L 16363923 intergenic not near genes chr2L 16364078 intergenic not near genes chr2L 16364234 intergenic not near genes chr2L_8_16360001 chr2L_16360001 RAL-383 543 chr2L 16375371 16375397 chr2L 16375482 16375507 5 111 5.5 0.0 2.8 1.3 136 chr2L 16375371 intergenic not near genes chr2L 16375439 intergenic not near genes chr2L 16375507 intergenic not near genes chr2L_5_16375001 chr2L_16375001 RAL-383 544 chr2L 16391791 16391831 chr2L 16391887 16391927 8 96 4.5 0.0 2.2 2.5 136 chr2L 16391791 intergenic not near genes chr2L 16391859 intergenic not near genes chr2L 16391927 intergenic not near genes chr2L_8_16390001 chr2L_16390001 RAL-383 545 chr2L 16487881 16487927 chr2L 16488011 16488057 13 130 2.5 3.5 3.0 3.2 176 chr2L 16487881 intergenic CG4580 + chr2L 16487969 intergenic CG4580 + chr2L 16488057 intergenic CG4580 + chr2L_13_16485001 chr2L_16485001 RAL-383 546 chr2L 16504979 16505016 chr2L 16505109 16505141 8 129 0.0 7.0 3.5 1.8 162 chr2L 16504979 intron Tpr2 + chr2L 16505060 intron Tpr2 + chr2L 16505141 intron Tpr2 + chr2L_8_16505001 chr2L_16505001 RAL-383 547 chr2L 16511941 16511996 chr2L 16519075 16519130 HMS-Beagle 11 7134 3.0 4.0 3.5 2.4 7189 chr2L 16511941 intron CG5953 - chr2L 16515536 intron CG5953 - chr2L 16519130 intron CG5953 - chr2L_11_16515001 chr2L_16515001 RAL-383 548 chr2L 16563598 16563616 chr2L 16563680 16563723 6 102 1.5 2.5 2.0 2.0 125 chr2L 16563598 intron CG42389 + chr2L 16563660 intron CG42389 + chr2L 16563723 intron CG42389 + chr2L_6_16560001 chr2L_16560001 RAL-383 549 chr2L 16570824 16570843 chr2L 16570920 16570939 4 96 0.5 1.0 0.8 2.2 115 chr2L 16570824 intron CG42389 + chr2L 16570882 intron CG42389 + chr2L 16570939 intron CG42389 + chr2L_4_16570001 chr2L_16570001 RAL-383 550 chr2L 16589808 16589825 chr2L 16589918 16589935 7 108 2.5 8.0 5.2 1.1 127 chr2L 16589808 intron CG42389 + chr2L 16589872 intron CG42389 + chr2L 16589935 intron CG42389 + chr2L_7_16585001 chr2L_16585001 RAL-383 551 chr2L 16600211 16600258 chr2L 16600353 16600400 18 136 3.5 6.5 5.0 3.0 189 chr2L 16600211 intron CG42389 + chr2L 16600306 intron CG42389 + chr2L 16600400 intron CG42389 + chr2L_18_16600001 chr2L_16600001 RAL-383 552 chr2L 16616591 16616606 chr2L 16616667 16616710 6 97 2.5 4.0 3.2 1.4 119 chr2L 16616591 intron CG42389 + chr2L 16616650 intron CG42389 + chr2L 16616710 intron CG42389 + chr2L_6_16615001 chr2L_16615001 RAL-383 553 chr2L 16670425 16670448 chr2L 16670495 16670545 11 94 3.0 2.0 2.5 3.1 120 chr2L 16670425 intron Trpgamma - chr2L 16670485 intron Trpgamma - chr2L 16670545 intron Trpgamma - chr2L_11_16670001 chr2L_16670001 RAL-383 554 chr2L 16694117 16694143 chr2L 16694223 16694226 5 99 6.5 8.0 7.2 0.6 109 chr2L 16694117 intron grp + chr2L 16694172 intron grp + chr2L 16694226 intron grp + chr2L_5_16690001 chr2L_16690001 RAL-383 555 chr2L 16695241 16695289 chr2L 16695345 16695393 12 103 4.0 2.5 3.2 2.9 152 chr2L 16695241 intron grp + chr2L 16695317 intron grp + chr2L 16695393 intron grp + chr2L_12_16695001 chr2L_16695001 RAL-383 556 chr2L 16697060 16697067 chr2L 16697273 16697280 5 213 4.0 7.0 5.5 0.8 220 chr2L 16697060 intron grp + chr2L 16697170 intron grp + chr2L 16697280 intron grp + chr2L_5_16695001 chr2L_16695001 RAL-383 557 chr2L 16764948 16764998 chr2L 16765048 16765098 10 100 2.5 2.5 2.5 2.9 150 chr2L 16764948 intergenic not near genes chr2L 16765023 intergenic not near genes chr2L 16765098 intergenic not near genes chr2L_10_16765001 chr2L_16765001 RAL-383 558 chr2L 16809630 16809655 chr2L 16809778 16809803 7 148 0.0 0.0 0.0 7.0 173 chr2L 16809630 intron,intron CG13280 -,CG13272 + chr2L 16809716 intron,intron CG13280 -,CG13272 + chr2L 16809803 intron,intron CG13280 -,CG13272 + chr2L_7_16805001 chr2L_16805001 RAL-383 559 chr2L 16841010 16841044 chr2L 16841107 16841141 6 96 2.0 4.5 3.2 1.4 131 chr2L 16841010 intron,intron SclA +,SclB + chr2L 16841076 intron,intron SclA +,SclB + chr2L 16841141 intron,intron SclA +,SclB + chr2L_6_16840001 chr2L_16840001 RAL-383 560 chr2L 16939986 16940011 chr2L 16940071 16940094 5 87 0.5 2.0 1.2 2.3 108 chr2L 16939986 intergenic not near genes chr2L 16940040 intergenic not near genes chr2L 16940094 intergenic not near genes chr2L_5_16940001 chr2L_16940001 RAL-383 561 chr2L 16958092 16958134 chr2L 16962900 16962940 Doc 12 4808 3.5 5.0 4.2 2.3 4848 chr2L 16958092 intergenic not near genes chr2L 16960516 intergenic not near genes chr2L 16962940 intergenic not near genes chr2L_12_16960001 chr2L_16960001 RAL-383 562 chr2L 16999015 16999034 chr2L 16999114 16999133 4 99 0.0 2.0 1.0 2.0 118 chr2L 16999015 intergenic CR45357 +,CR45356 + chr2L 16999074 intergenic CR45357 + chr2L 16999133 intergenic CR45357 + chr2L_4_16995001 chr2L_16995001 RAL-383 563 chr2L 17000101 17000149 chr2L 17000243 17000288 8 142 6.5 4.0 5.2 1.3 187 chr2L 17000101 intergenic not near genes chr2L 17000194 intergenic not near genes chr2L 17000288 intergenic not near genes chr2L_8_17000001 chr2L_17000001 RAL-383 564 chr2L 17018684 17018740 chr2L 17018780 17018836 11 94 3.0 1.5 2.2 3.4 152 chr2L 17018684 intergenic not near genes chr2L 17018760 intergenic not near genes chr2L 17018836 intergenic not near genes chr2L_11_17015001 chr2L_17015001 RAL-383 565 chr2L 17032482 17032523 chr2L 17032587 17032624 6 99 1.5 2.5 2.0 2.0 142 chr2L 17032482 intergenic not near genes chr2L 17032553 intergenic not near genes chr2L 17032624 intergenic not near genes chr2L_6_17030001 chr2L_17030001 RAL-383 566 chr2L 17070181 17070217 chr2L 17070297 17070333 8 116 3.0 4.0 3.5 1.8 152 chr2L 17070181 intergenic not near genes chr2L 17070257 intergenic not near genes chr2L 17070333 intergenic not near genes chr2L_8_17070001 chr2L_17070001 RAL-383 567 chr2L 17087363 17087394 chr2L 17087501 17087532 8 134 4.5 4.5 4.5 1.5 169 chr2L 17087363 intergenic CG12620 + chr2L 17087448 intergenic CG12620 + chr2L 17087532 intergenic CG12620 + chr2L_8_17085001 chr2L_17085001 RAL-383 568 chr2L 17101886 17101916 chr2L 17101983 17101998 6 92 3.5 3.0 3.2 1.4 112 chr2L 17101886 intergenic not near genes chr2L 17101942 intergenic not near genes chr2L 17101998 intergenic not near genes chr2L_6_17100001 chr2L_17100001 RAL-383 569 chr2L 17120838 17120869 chr2L 17120928 17120968 12 97 5.5 1.0 3.2 2.9 130 chr2L 17120838 intergenic not near genes chr2L 17120903 intergenic not near genes chr2L 17120968 intergenic not near genes chr2L_12_17120001 chr2L_17120001 RAL-383 570 chr2L 17158726 17158751 chr2L 17158828 17158874 8 117 1.5 2.0 1.8 2.9 148 chr2L 17158726 5` UTR,exon CG34106 +,beat-IIIa + chr2L 17158800 intron,intron CG34106 +,beat-IIIa + chr2L 17158874 intron,intron CG34106 +,beat-IIIa + chr2L_8_17155001 chr2L_17155001 RAL-383 571 chr2L 17167549 17167590 chr2L 17167810 17167851 pogo 13 258 4.5 2.0 3.2 3.1 302 chr2L 17167549 intron,intron CG34106 +,beat-IIIa + chr2L 17167700 intron,intron CG34106 +,beat-IIIa + chr2L 17167851 intron,intron CG34106 +,beat-IIIa + chr2L_13_17165001 chr2L_17165001 RAL-383 572 chr2L 17199154 17199165 chr2L 17200632 17200651 hobo 6 1485 5.5 4.5 5.0 1.0 1497 chr2L 17199154 intron beat-IIIc - chr2L 17199902 intron beat-IIIc - chr2L 17200651 intron beat-IIIc - chr2L_6_17195001 chr2L_17195001 RAL-383 573 chr2L 17199166 17199190 chr2L 17200626 17200675 hobo 6 1480 2.0 4.5 3.2 1.4 1509 chr2L 17199166 intron beat-IIIc - chr2L 17199920 intron beat-IIIc - chr2L 17200675 intron beat-IIIc - chr2L_6_17195001 chr2L_17195001 RAL-383 574 chr2L 17210651 17210683 chr2L 17210733 17210736 7 88 2.0 6.5 4.2 1.3 85 chr2L 17210651 intron beat-IIIc - chr2L 17210694 intron beat-IIIc - chr2L 17210736 intron beat-IIIc - chr2L_7_17210001 chr2L_17210001 RAL-383 575 chr2L 17226086 17226120 chr2L 17226179 17226219 5 91 4.5 3.5 4.0 1.0 133 chr2L 17226086 intron beat-IIIc - chr2L 17226152 intron beat-IIIc - chr2L 17226219 intron beat-IIIc - chr2L_5_17225001 chr2L_17225001 RAL-383 576 chr2L 17260875 17260887 chr2L 17260978 17260990 4 103 4.0 5.0 4.5 0.7 115 chr2L 17260875 intergenic beat-IIIc - chr2L 17260932 intergenic beat-IIIc - chr2L 17260990 intergenic beat-IIIc - chr2L_4_17260001 chr2L_17260001 RAL-383 577 chr2L 17273178 17273205 chr2L 17277981 17277981 F-element 6 4796 6.0 4.5 5.2 1.0 4803 chr2L 17273178 intergenic not near genes chr2L 17275580 intergenic not near genes chr2L 17277981 intergenic not near genes chr2L_6_17275001 chr2L_17275001 RAL-383 578 chr2L 17289230 17289251 chr2L 17289322 17289330 5 92 5.0 0.0 2.5 1.4 100 chr2L 17289230 intergenic not near genes chr2L 17289280 intergenic not near genes chr2L 17289330 intergenic not near genes chr2L_5_17285001 chr2L_17285001 RAL-383 579 chr2L 17304971 17305014 chr2L 17305169 17305212 5 198 6.0 2.0 4.0 1.0 241 chr2L 17304971 intergenic not near genes chr2L 17305092 intergenic not near genes chr2L 17305212 intergenic not near genes chr2L_5_17305001 chr2L_17305001 RAL-383 580 chr2L 17310359 17310403 chr2L 17310473 17310498 6 110 0.0 2.0 1.0 3.0 139 chr2L 17310359 intergenic not near genes chr2L 17310428 intergenic not near genes chr2L 17310498 intergenic not near genes chr2L_6_17310001 chr2L_17310001 RAL-383 581 chr2L 17333568 17333615 chr2L 17333673 17333720 6 103 1.5 1.5 1.5 2.4 152 chr2L 17333568 intergenic not near genes chr2L 17333644 intergenic not near genes chr2L 17333720 intergenic not near genes chr2L_6_17330001 chr2L_17330001 RAL-383 582 chr2L 17339116 17339158 chr2L 17339213 17339255 12 97 3.5 3.5 3.5 2.7 139 chr2L 17339116 intergenic not near genes chr2L 17339186 intergenic not near genes chr2L 17339255 intergenic not near genes chr2L_12_17335001 chr2L_17335001 RAL-383 583 chr2L 17415537 17415568 chr2L 17415649 17415676 8 112 4.5 1.5 3.0 2.0 139 chr2L 17415537 intron Dif - chr2L 17415606 intron Dif - chr2L 17415676 intron Dif - chr2L_8_17415001 chr2L_17415001 RAL-383 584 chr2L 17424705 17424735 chr2L 17424837 17424867 15 131 1.5 1.0 1.2 6.8 162 chr2L 17424705 intron Dif - chr2L 17424786 intron Dif - chr2L 17424867 intron Dif - chr2L_15_17420001 chr2L_17420001 RAL-383 585 chr2L 17432020 17432040 chr2L 17432135 17432167 1360 4 124 0.5 5.0 2.8 1.1 147 chr2L 17432020 intron Dif - chr2L 17432094 intron Dif - chr2L 17432167 intron Dif - chr2L_4_17430001 chr2L_17430001 RAL-383 586 chr2L 17543574 17543585 chr2L 17543687 17543698 4 113 13.0 3.0 8.0 0.4 124 chr2L 17543574 intergenic not near genes chr2L 17543636 intergenic not near genes chr2L 17543698 intergenic not near genes chr2L_4_17540001 chr2L_17540001 RAL-383 587 chr2L 17543586 17543625 chr2L 17543685 17543738 15 108 3.5 3.0 3.2 3.6 152 chr2L 17543586 intergenic not near genes chr2L 17543662 intergenic not near genes chr2L 17543738 intergenic not near genes chr2L_15_17540001 chr2L_17540001 RAL-383 588 chr2L 17550129 17550166 chr2L 17550247 17550253 6 112 3.0 3.5 3.2 1.4 124 chr2L 17550129 intergenic not near genes chr2L 17550191 intergenic not near genes chr2L 17550253 intergenic not near genes chr2L_6_17550001 chr2L_17550001 RAL-383 589 chr2L 17551301 17551324 chr2L 17551432 17551455 6 131 2.5 0.0 1.2 2.7 154 chr2L 17551301 intergenic not near genes chr2L 17551378 intergenic not near genes chr2L 17551455 intergenic not near genes chr2L_6_17550001 chr2L_17550001 RAL-383 590 chr2L 17562917 17562967 chr2L 17563016 17563056 13 86 3.5 5.5 4.5 2.4 139 chr2L 17562917 intergenic not near genes chr2L 17562986 intergenic not near genes chr2L 17563056 intergenic not near genes chr2L_13_17560001 chr2L_17560001 RAL-383 591 chr2L 17564142 17564178 chr2L 17564245 17564281 5 103 4.0 4.0 4.0 1.0 139 chr2L 17564142 intergenic not near genes chr2L 17564212 intergenic not near genes chr2L 17564281 intergenic not near genes chr2L_5_17560001 chr2L_17560001 RAL-383 592 chr2L 17580877 17580920 chr2L 17581751 17581794 17 872 2.0 4.0 3.0 4.2 917 chr2L 17580877 intergenic not near genes chr2L 17581336 intergenic not near genes chr2L 17581794 intergenic not near genes chr2L_17_17580001 chr2L_17580001 RAL-383 593 chr2L 17607464 17607478 chr2L 17607582 17607596 6 118 5.5 0.5 3.0 1.5 132 chr2L 17607464 intergenic CR44412 - chr2L 17607530 intergenic CR44412 - chr2L 17607596 intergenic CR44412 - chr2L_6_17605001 chr2L_17605001 RAL-383 594 chr2L 17621787 17621804 chr2L 17621870 17621895 4 97 5.0 2.5 3.8 0.8 108 chr2L 17621787 intergenic not near genes chr2L 17621841 intergenic not near genes chr2L 17621895 intergenic not near genes chr2L_4_17620001 chr2L_17620001 RAL-383 595 chr2L 17637138 17637174 chr2L 17637236 17637269 10 98 2.0 6.5 4.2 1.9 131 chr2L 17637138 intergenic not near genes chr2L 17637204 intergenic not near genes chr2L 17637269 intergenic not near genes chr2L_10_17635001 chr2L_17635001 RAL-383 596 chr2L 17675926 17675972 chr2L 17676022 17676071 12 99 1.5 3.0 2.2 3.8 145 chr2L 17675926 intron CadN - chr2L 17675998 intron CadN - chr2L 17676071 intron CadN - chr2L_12_17675001 chr2L_17675001 RAL-383 597 chr2L 17687498 17687520 chr2L 17692263 17692285 F-element 6 4765 1.5 1.5 1.5 2.4 4787 chr2L 17687498 intron CadN - chr2L 17689892 intron CadN - chr2L 17692285 intron CadN - chr2L_6_17685001 chr2L_17685001 RAL-383 598 chr2L 17709102 17709149 chr2L 17709202 17709253 9 103 3.0 4.0 3.5 2.0 151 chr2L 17709102 intron CadN - chr2L 17709178 intron CadN - chr2L 17709253 intron CadN - chr2L_9_17705001 chr2L_17705001 RAL-383 599 chr2L 17710012 17710060 chr2L 17710128 17710176 11 112 3.0 3.0 3.0 2.8 164 chr2L 17710012 intron CadN - chr2L 17710094 intron CadN - chr2L 17710176 intron CadN - chr2L_11_17710001 chr2L_17710001 RAL-383 600 chr2L 17727861 17727877 chr2L 17729348 17729364 hobo 4 1487 3.0 2.0 2.5 1.1 1503 chr2L 17727861 intron CadN - chr2L 17728612 intron CadN - chr2L 17729364 intron CadN - chr2L_4_17725001 chr2L_17725001 RAL-383 601 chr2L 17819901 17819952 chr2L 17825124 17825175 copia 11 5223 2.0 4.0 3.0 2.8 5274 chr2L 17819901 intron CadN2 - chr2L 17822538 intron CadN2 - chr2L 17825175 intron CadN2 - chr2L_11_17820001 chr2L_17820001 RAL-383 602 chr2L 17867876 17867918 chr2L 17868038 17868080 9 156 0.0 8.0 4.0 1.8 204 chr2L 17867876 intron CadN2 - chr2L 17867978 intron CadN2 - chr2L 17868080 intron CadN2 - chr2L_9_17865001 chr2L_17865001 RAL-383 603 chr2L 17898668 17898694 chr2L 17898836 17898856 5 167 3.0 2.5 2.8 1.3 188 chr2L 17898668 intergenic not near genes chr2L 17898762 intergenic not near genes chr2L 17898856 intergenic not near genes chr2L_5_17895001 chr2L_17895001 RAL-383 604 chr2L 17911939 17911986 chr2L 17914137 17914177 pogo 11 2193 2.5 3.5 3.0 2.8 2238 chr2L 17911939 intergenic not near genes chr2L 17913058 intergenic not near genes chr2L 17914177 intergenic CG43271 - chr2L_11_17910001 chr2L_17910001 RAL-383 605 chr2L 17943584 17943628 chr2L 17943680 17943724 20 96 6.0 7.0 6.5 2.7 140 chr2L 17943584 intergenic not near genes chr2L 17943654 intergenic not near genes chr2L 17943724 intergenic not near genes chr2L_20_17940001 chr2L_17940001 RAL-383 606 chr2L 17951932 17951971 chr2L 17953419 17953458 hobo 23 1486 5.0 3.5 4.2 4.4 1526 chr2L 17951932 intergenic CR44398 -,CR44397 - chr2L 17952695 intergenic not near genes chr2L 17953458 intergenic not near genes chr2L_23_17950001 chr2L_17950001 RAL-383 607 chr2L 18044226 18044274 chr2L 18044574 18044622 23 348 2.0 3.5 2.8 6.1 396 chr2L 18044226 intron rdo + chr2L 18044424 intron rdo + chr2L 18044622 intron rdo + chr2L_23_18040001 chr2L_18040001 RAL-383 608 chr2L 18051865 18051900 chr2L 18061032 18061067 roo 8 9167 6.0 5.0 5.5 1.2 9202 chr2L 18051865 intron rdo + chr2L 18056466 intron rdo + chr2L 18061067 intron rdo + chr2L_8_18055001 chr2L_18055001 RAL-383 609 chr2L 18087616 18087646 chr2L 18087808 18087811 10 195 2.5 2.5 2.5 2.9 195 chr2L 18087616 intergenic not near genes chr2L 18087714 intergenic not near genes chr2L 18087811 intergenic not near genes chr2L_10_18085001 chr2L_18085001 RAL-383 610 chr2L 18095573 18095591 chr2L 18095674 18095694 6 101 8.5 3.0 5.8 0.9 121 chr2L 18095573 intergenic not near genes chr2L 18095634 intergenic not near genes chr2L 18095694 intergenic not near genes chr2L_6_18095001 chr2L_18095001 RAL-383 611 chr2L 18111221 18111266 chr2L 18111332 18111351 5 105 1.0 3.0 2.0 1.7 130 chr2L 18111221 intergenic not near genes chr2L 18111286 intergenic not near genes chr2L 18111351 intergenic not near genes chr2L_5_18110001 chr2L_18110001 RAL-383 612 chr2L 18143467 18143500 chr2L 18143550 18143568 9 83 1.5 5.5 3.5 2.0 101 chr2L 18143467 intron Socs36E - chr2L 18143518 intron Socs36E - chr2L 18143568 intron Socs36E - chr2L_9_18140001 chr2L_18140001 RAL-383 613 chr2L 18159717 18159766 chr2L 18162234 18162283 8 2522 22.5 17.0 19.8 0.4 2566 chr2L 18159717 intergenic CG42750 -,CG7200 - chr2L 18161000 3` UTR CG42750 - chr2L 18162283 intron CG42750 - chr2L_8_18160001 chr2L_18160001 RAL-383 614 chr2L 18231118 18231135 chr2L 18231223 18231240 4 104 6.5 3.0 4.8 0.7 122 chr2L 18231118 intron CG42750 - chr2L 18231179 intron CG42750 - chr2L 18231240 intron CG42750 - chr2L_4_18230001 chr2L_18230001 RAL-383 615 chr2L 18281753 18281802 chr2L 18281868 18281872 9 109 2.0 7.5 4.8 1.6 119 chr2L 18281753 intergenic not near genes chr2L 18281812 intergenic not near genes chr2L 18281872 intergenic not near genes chr2L_9_18280001 chr2L_18280001 RAL-383 616 chr2L 18291508 18291539 chr2L 18291626 18291656 10 117 3.5 0.0 1.8 3.6 148 chr2L 18291508 intergenic CG43362 -,CR44693 +,CR44696 - chr2L 18291582 intergenic CR44693 +,CG43362 -,CR44696 - chr2L 18291656 intergenic CR44693 +,CG43362 -,CR44696 - chr2L_10_18290001 chr2L_18290001 RAL-383 617 chr2L 18307877 18307916 chr2L 18307974 18308013 8 95 4.0 2.5 3.2 1.9 136 chr2L 18307877 intergenic CR43353 - chr2L 18307945 intergenic CR43353 - chr2L 18308013 intergenic CR43353 - chr2L_8_18305001 chr2L_18305001 RAL-383 618 chr2L 18380192 18380241 chr2L 18380299 18380348 13 101 3.5 4.5 4.0 2.6 156 chr2L 18380192 intron Fas3 + chr2L 18380270 intron Fas3 + chr2L 18380348 intron Fas3 + chr2L_13_18380001 chr2L_18380001 RAL-383 619 chr2L 18408013 18408036 chr2L 18412817 18412840 Doc 11 4803 7.0 0.0 3.5 2.4 4827 chr2L 18408013 intergenic not near genes chr2L 18410426 intergenic not near genes chr2L 18412840 intergenic not near genes chr2L_11_18410001 chr2L_18410001 RAL-383 620 chr2L 18441138 18441164 chr2L 18441298 18441317 4 158 5.0 5.0 5.0 0.7 179 chr2L 18441138 intergenic RpS26 - chr2L 18441228 intergenic RpS26 - chr2L 18441317 intergenic RpS26 - chr2L_4_18440001 chr2L_18440001 RAL-383 621 chr2L 18442343 18442375 chr2L 18442422 18442474 6 94 0.5 5.0 2.8 1.6 131 chr2L 18442343 3` UTR RpS26 - chr2L 18442408 3` UTR RpS26 - chr2L 18442474 3` UTR RpS26 - chr2L_6_18440001 chr2L_18440001 RAL-383 622 chr2L 18449381 18449417 chr2L 18449502 18449536 11 121 0.0 2.0 1.0 5.5 155 chr2L 18449381 intergenic bsf -,ncm - chr2L 18449458 intergenic bsf - chr2L 18449536 3` UTR bsf - chr2L_11_18445001 chr2L_18445001 RAL-383 623 chr2L 18480777 18480818 chr2L 18480880 18480909 9 100 4.5 4.0 4.2 1.7 132 chr2L 18480777 intron CG10283 - chr2L 18480843 intron CG10283 - chr2L 18480909 intron CG10283 - chr2L_9_18480001 chr2L_18480001 RAL-383 624 chr2L 18537893 18537946 chr2L 18537993 18538046 14 95 3.5 3.5 3.5 3.1 153 chr2L 18537893 intron Pde11 - chr2L 18537970 intron Pde11 - chr2L 18538046 exon Pde11 - chr2L_14_18535001 chr2L_18535001 RAL-383 625 chr2L 18659910 18659948 chr2L 18660014 18660051 8 104 4.0 2.0 3.0 2.0 141 chr2L 18659910 intron MESR3 + chr2L 18659980 intron MESR3 + chr2L 18660051 intron MESR3 + chr2L_8_18655001 chr2L_18655001 RAL-383 626 chr2L 18816721 18816730 chr2L 18816873 18816882 4 150 7.0 4.0 5.5 0.6 161 chr2L 18816721 intergenic not near genes chr2L 18816802 intergenic not near genes chr2L 18816882 intergenic not near genes chr2L_4_18815001 chr2L_18815001 RAL-383 627 chr2L 18816734 18816762 chr2L 18816871 18816910 12 148 2.5 3.5 3.0 3.0 176 chr2L 18816734 intergenic not near genes chr2L 18816822 intergenic not near genes chr2L 18816910 intergenic not near genes chr2L_12_18815001 chr2L_18815001 RAL-383 628 chr2L 18883832 18883879 chr2L 18883934 18883981 11 99 3.0 2.0 2.5 3.1 149 chr2L 18883832 intergenic not near genes chr2L 18883906 intergenic not near genes chr2L 18883981 intergenic not near genes chr2L_11_18880001 chr2L_18880001 RAL-383 629 chr2L 18902603 18902656 chr2L 18902904 18902957 14 298 4.0 2.0 3.0 3.5 354 chr2L 18902603 intergenic not near genes chr2L 18902780 intergenic not near genes chr2L 18902957 intergenic not near genes chr2L_14_18900001 chr2L_18900001 RAL-383 630 chr2L 18903076 18903124 chr2L 18903193 18903241 8 114 4.0 5.5 4.8 1.4 165 chr2L 18903076 intergenic not near genes chr2L 18903158 intergenic not near genes chr2L 18903241 intergenic not near genes chr2L_8_18900001 chr2L_18900001 RAL-383 631 chr2L 18926568 18926587 chr2L 18926695 18926714 8 127 0.0 0.0 0.0 8.0 146 chr2L 18926568 intron ssp3 - chr2L 18926641 intron ssp3 - chr2L 18926714 intron ssp3 - chr2L_8_18925001 chr2L_18925001 RAL-383 632 chr2L 19070254 19070297 chr2L 19070365 19070370 8 102 2.5 3.0 2.8 2.1 116 chr2L 19070254 intergenic CG10702 - chr2L 19070312 intergenic CG10702 - chr2L 19070370 intergenic not near genes chr2L_8_19070001 chr2L_19070001 RAL-383 633 chr2L 19147373 19147403 chr2L 19154405 19154417 297 5 7036 3.5 3.0 3.2 1.2 7044 chr2L 19147373 intron brat + chr2L 19150895 intron brat + chr2L 19154417 intron brat + chr2L_5_19150001 chr2L_19150001 RAL-383 634 chr2L 19163506 19163557 chr2L 19163610 19163655 15 99 2.5 3.5 3.0 3.8 149 chr2L 19163506 intron brat + chr2L 19163580 intron brat + chr2L 19163655 intron brat + chr2L_15_19160001 chr2L_19160001 RAL-383 635 chr2L 19198561 19198562 chr2L 19198614 19198659 4 86 6.5 5.0 5.8 0.6 98 chr2L 19198561 intron drl + chr2L 19198610 intron drl + chr2L 19198659 intron drl + chr2L_4_19195001 chr2L_19195001 RAL-383 636 chr2L 19246809 19246848 chr2L 19246909 19246948 17 98 4.5 1.5 3.0 4.2 139 chr2L 19246809 intergenic not near genes chr2L 19246878 intergenic not near genes chr2L 19246948 intergenic not near genes chr2L_17_19245001 chr2L_19245001 RAL-383 637 chr2L 19266179 19266204 chr2L 19266341 19266385 4 176 2.0 1.0 1.5 1.6 206 chr2L 19266179 intergenic not near genes chr2L 19266282 intergenic not near genes chr2L 19266385 intergenic not near genes chr2L_4_19265001 chr2L_19265001 RAL-383 638 chr2L 19290943 19290978 chr2L 19291075 19291109 12 129 1.5 4.5 3.0 3.0 166 chr2L 19290943 intergenic not near genes chr2L 19291026 intergenic not near genes chr2L 19291109 intergenic not near genes chr2L_12_19290001 chr2L_19290001 RAL-383 639 chr2L 19345007 19345022 chr2L 19357225 19357234 blood 5 12221 5.0 5.5 5.2 0.8 12227 chr2L 19345007 intron dnt - chr2L 19351120 intron dnt - chr2L 19357234 intron dnt - chr2L_5_19350001 chr2L_19350001 RAL-383 640 chr2L 19345023 19345042 chr2L 19357221 19357244 blood 7 12221 3.0 3.5 3.2 1.7 12221 chr2L 19345023 intron dnt - chr2L 19351134 intron dnt - chr2L 19357244 intron dnt - chr2L_7_19350001 chr2L_19350001 RAL-383 641 chr2L 19357528 19357556 chr2L 19357638 19357666 16 110 7.5 10.0 8.8 1.6 138 chr2L 19357528 intron dnt - chr2L 19357597 intron dnt - chr2L 19357666 intron dnt - chr2L_16_19355001 chr2L_19355001 RAL-383 642 chr2L 19372696 19372744 chr2L 19372797 19372846 17 100 1.5 4.0 2.8 4.5 150 chr2L 19372696 3` UTR CG17349 + chr2L 19372771 intergenic CG17349 + chr2L 19372846 intergenic CG17349 + chr2L_17_19370001 chr2L_19370001 RAL-383 643 chr2L 19380493 19380526 chr2L 19380593 19380626 13 99 2.0 4.5 3.2 3.1 133 chr2L 19380493 intergenic CG17350 + chr2L 19380560 intergenic CG17350 + chr2L 19380626 intergenic CG17350 + chr2L_13_19380001 chr2L_19380001 RAL-383 644 chr2L 19405598 19405634 chr2L 19405708 19405736 15 108 5.0 1.5 3.2 3.6 138 chr2L 19405598 intron Pax - chr2L 19405667 intron Pax - chr2L 19405736 intron Pax - chr2L_15_19405001 chr2L_19405001 RAL-383 645 chr2L 19441047 19441071 chr2L 19441144 19441163 11 96 6.0 10.5 8.2 1.2 116 chr2L 19441047 intron CG10237 - chr2L 19441105 intron CG10237 - chr2L 19441163 5` UTR CG10237 - chr2L_11_19440001 chr2L_19440001 RAL-383 646 chr2L 19520161 19520193 chr2L 19520260 19520292 12 98 4.0 5.5 4.8 2.1 131 chr2L 19520161 intron CG10132 + chr2L 19520226 intron CG10132 + chr2L 19520292 intron CG10132 + chr2L_12_19520001 chr2L_19520001 RAL-383 647 chr2L 19543106 19543158 chr2L 19543210 19543262 26 102 6.0 2.0 4.0 5.2 156 chr2L 19543106 intron ref(2)P + chr2L 19543184 intron ref(2)P + chr2L 19543262 intron ref(2)P + chr2L_26_19540001 chr2L_19540001 RAL-383 648 chr2L 19559168 19559212 chr2L 19559269 19559319 16 106 3.0 3.0 3.0 4.0 151 chr2L 19559168 exon Tep5 + chr2L 19559244 exon Tep5 + chr2L 19559319 exon Tep5 + chr2L_16_19555001 chr2L_19555001 RAL-383 649 chr2L 19559989 19559995 chr2L 19560257 19560268 6 272 5.5 3.5 4.5 1.1 279 chr2L 19559989 exon Tep5 + chr2L 19560128 exon Tep5 + chr2L 19560268 exon Tep5 + chr2L_6_19560001 chr2L_19560001 RAL-383 650 chr2L 19559997 19560030 chr2L 19560256 19560302 6 267 3.5 3.0 3.2 1.4 305 chr2L 19559997 exon Tep5 + chr2L 19560150 exon Tep5 + chr2L 19560302 intron Tep5 + chr2L_6_19560001 chr2L_19560001 RAL-383 651 chr2L 19562528 19562561 chr2L 19562613 19562636 8 91 6.0 2.0 4.0 1.6 108 chr2L 19562528 exon Tep5 + chr2L 19562582 intron Tep5 + chr2L 19562636 exon Tep5 + chr2L_8_19560001 chr2L_19560001 RAL-383 652 chr2L 19608586 19608604 chr2L 19608697 19608715 5 111 6.0 5.0 5.5 0.8 129 chr2L 19608586 intron Lar + chr2L 19608650 intron Lar + chr2L 19608715 intron Lar + chr2L_5_19605001 chr2L_19605001 RAL-383 653 chr2L 19620076 19620106 chr2L 19621085 19621115 jockey 6 1008 6.0 4.5 5.2 1.0 1039 chr2L 19620076 intron Lar + chr2L 19620596 intron Lar + chr2L 19621115 intron Lar + chr2L_6_19620001 chr2L_19620001 RAL-383 654 chr2L 19620111 19620132 chr2L 19621084 19621115 jockey 4 988 1.0 4.5 2.8 1.1 1004 chr2L 19620111 intron Lar + chr2L 19620613 intron Lar + chr2L 19621115 intron Lar + chr2L_4_19620001 chr2L_19620001 RAL-383 655 chr2L 19638536 19638571 chr2L 19638628 19638679 13 106 3.5 3.5 3.5 2.9 143 chr2L 19638536 intron Lar + chr2L 19638608 intron Lar + chr2L 19638679 intron Lar + chr2L_13_19635001 chr2L_19635001 RAL-383 656 chr2L 19652553 19652565 chr2L 19674009 19674020 opus 6 21456 7.0 3.0 5.0 1.0 21467 chr2L 19652553 intron Lar + chr2L 19663286 intron Lar + chr2L 19674020 intron Lar + chr2L_6_19660001 chr2L_19660001 RAL-383 657 chr2L 19652570 19652603 chr2L 19674005 19674056 opus 8 21450 2.5 3.0 2.8 2.1 21486 chr2L 19652570 intron Lar + chr2L 19663313 intron Lar + chr2L 19674056 intron Lar + chr2L_8_19660001 chr2L_19660001 RAL-383 658 chr2L 19703520 19703568 chr2L 19712676 19712718 roo 24 9154 6.5 7.0 6.8 3.1 9198 chr2L 19703520 intron Lar + chr2L 19708119 intron Lar + chr2L 19712718 intron Lar + chr2L_24_19705001 chr2L_19705001 RAL-383 659 chr2L 19737357 19737380 chr2L 19740832 19740853 1360 5 3475 5.0 3.0 4.0 1.0 3496 chr2L 19737357 intergenic Nf-YB + chr2L 19739105 intergenic not near genes chr2L 19740853 intergenic not near genes chr2L_5_19735001 chr2L_19735001 RAL-383 660 chr2L 19762789 19762816 chr2L 19763051 19763078 pogo 7 262 4.5 5.5 5.0 1.2 289 chr2L 19762789 exon fbp - chr2L 19762934 intron fbp - chr2L 19763078 intron fbp - chr2L_7_19760001 chr2L_19760001 RAL-383 661 chr2L 19817515 19817565 chr2L 19817652 19817702 13 136 12.0 19.0 15.5 0.8 187 chr2L 19817515 intron sick + chr2L 19817608 intron sick + chr2L 19817702 intron sick + chr2L_13_19815001 chr2L_19815001 RAL-383 662 chr2L 19817539 19817542 chr2L 19817864 19817866 4 324 11.5 9.0 10.2 0.4 327 chr2L 19817539 intron sick + chr2L 19817702 intron sick + chr2L 19817866 intron sick + chr2L_4_19815001 chr2L_19815001 RAL-383 663 chr2L 19823247 19823290 chr2L 19823348 19823399 5 106 3.5 0.0 1.8 1.8 152 chr2L 19823247 intron sick + chr2L 19823323 intron sick + chr2L 19823399 intron sick + chr2L_5_19820001 chr2L_19820001 RAL-383 664 chr2L 19846261 19846276 chr2L 19846362 19846377 5 101 1.0 5.0 3.0 1.2 116 chr2L 19846261 intron sick + chr2L 19846319 intron sick + chr2L 19846377 intron sick + chr2L_5_19845001 chr2L_19845001 RAL-383 665 chr2L 20000032 20000039 chr2L 20000141 20000148 4 108 5.0 1.5 3.2 1.0 116 chr2L 20000032 intron CG43861 - chr2L 20000090 intron CG43861 - chr2L 20000148 intron,3` UTR CG43861 -,CR44908 - chr2L_4_20000001 chr2L_20000001 RAL-383 666 chr2L 20000044 20000074 chr2L 20000138 20000178 5 105 1.0 1.5 1.2 2.3 134 chr2L 20000044 intron CG43861 - chr2L 20000111 intron CG43861 - chr2L 20000178 intron,3` UTR CG43861 -,CR44908 - chr2L_5_20000001 chr2L_20000001 RAL-383 667 chr2L 20005858 20005900 chr2L 20010954 20010996 flea 11 5094 3.5 5.0 4.2 2.1 5138 chr2L 20005858 intron CG43861 - chr2L 20008427 intron CG43861 - chr2L 20010996 intron CG43861 - chr2L_11_20005001 chr2L_20005001 RAL-383 668 chr2L 20041156 20041206 chr2L 20041321 20041371 9 165 0.5 3.5 2.0 3.0 215 chr2L 20041156 intron sNPF + chr2L 20041264 intron sNPF + chr2L 20041371 intron sNPF + chr2L_9_20040001 chr2L_20040001 RAL-383 669 chr2L 20045188 20045201 chr2L 20045289 20045304 4 102 0.0 0.0 0.0 4.0 116 chr2L 20045188 intron sNPF + chr2L 20045246 intron sNPF + chr2L 20045304 intron sNPF + chr2L_4_20045001 chr2L_20045001 RAL-383 670 chr2L 20122619 20122642 chr2L 20122727 20122753 5 110 3.5 3.5 3.5 1.1 134 chr2L 20122619 intergenic not near genes chr2L 20122686 intergenic not near genes chr2L 20122753 intergenic not near genes chr2L_5_20120001 chr2L_20120001 RAL-383 671 chr2L 20236488 20236538 chr2L 20236584 20236634 15 95 3.0 3.5 3.2 3.6 146 chr2L 20236488 intergenic not near genes chr2L 20236561 intergenic not near genes chr2L 20236634 intergenic not near genes chr2L_15_20235001 chr2L_20235001 RAL-383 672 chr2L 20272099 20272132 chr2L 20282829 20282859 copia 14 10730 3.5 4.5 4.0 2.8 10760 chr2L 20272099 intergenic not near genes chr2L 20277479 intergenic not near genes chr2L 20282859 intergenic not near genes chr2L_14_20275001 chr2L_20275001 RAL-383 673 chr2L 20296487 20296535 chr2L 20296588 20296636 15 101 0.0 0.0 0.0 15.0 149 chr2L 20296487 intergenic CR43414 - chr2L 20296562 intergenic CR43414 - chr2L 20296636 intergenic CR43414 - chr2L_15_20295001 chr2L_20295001 RAL-383 674 chr2L 20299399 20299443 chr2L 20299542 20299569 13 138 0.0 6.0 3.0 3.2 170 chr2L 20299399 intergenic not near genes chr2L 20299484 intergenic not near genes chr2L 20299569 intergenic not near genes chr2L_13_20295001 chr2L_20295001 RAL-383 675 chr2L 20303171 20303187 chr2L 20310647 20310675 blood 5 7486 0.5 6.5 3.5 1.1 7504 chr2L 20303171 intergenic not near genes chr2L 20306923 intergenic not near genes chr2L 20310675 intergenic not near genes chr2L_5_20305001 chr2L_20305001 RAL-383 676 chr2L 20326565 20326601 chr2L 20326666 20326694 5 95 2.0 5.5 3.8 1.0 129 chr2L 20326565 intron spir + chr2L 20326630 intron spir + chr2L 20326694 intron spir + chr2L_5_20325001 chr2L_20325001 RAL-383 677 chr2L 20327229 20327254 chr2L 20327327 20327352 15 98 0.0 11.0 5.5 2.3 123 chr2L 20327229 intron spir + chr2L 20327290 intron spir + chr2L 20327352 intron spir + chr2L_15_20325001 chr2L_20325001 RAL-383 678 chr2L 20372198 20372255 chr2L 20372468 20372516 pogo 12 268 0.0 4.0 2.0 4.0 318 chr2L 20372198 intergenic Ugt37a1 - chr2L 20372357 intergenic Ugt37a1 - chr2L 20372516 exon Ugt37a1 - chr2L_12_20370001 chr2L_20370001 RAL-383 679 chr2L 20393769 20393811 chr2L 20393955 20393997 14 184 8.0 4.0 6.0 2.0 228 chr2L 20393769 intron CG10947 - chr2L 20393883 intron CG10947 - chr2L 20393997 intron CG10947 - chr2L_14_20390001 chr2L_20390001 RAL-383 680 chr2L 20498668 20498708 chr2L 20498787 20498827 9 117 4.5 5.0 4.8 1.6 159 chr2L 20498668 intergenic not near genes chr2L 20498748 intergenic not near genes chr2L 20498827 intergenic not near genes chr2L_9_20495001 chr2L_20495001 RAL-383 681 chr2L 20546032 20546071 chr2L 20546129 20546168 9 93 3.5 3.5 3.5 2.0 136 chr2L 20546032 intergenic not near genes chr2L 20546100 intergenic not near genes chr2L 20546168 intergenic not near genes chr2L_9_20545001 chr2L_20545001 RAL-383 682 chr2L 20549111 20549150 chr2L 20549213 20549252 9 102 4.0 1.0 2.5 2.6 141 chr2L 20549111 intergenic not near genes chr2L 20549182 intergenic not near genes chr2L 20549252 intergenic not near genes chr2L_9_20545001 chr2L_20545001 RAL-383 683 chr2L 20553166 20553217 chr2L 20553261 20553313 23 95 2.0 4.5 3.2 5.5 147 chr2L 20553166 intergenic not near genes chr2L 20553240 intergenic not near genes chr2L 20553313 intergenic not near genes chr2L_23_20550001 chr2L_20550001 RAL-383 684 chr2L 20567315 20567366 chr2L 20567467 20567518 11 148 6.0 5.0 5.5 1.7 203 chr2L 20567315 intron CR45347 + chr2L 20567416 intron CR45347 + chr2L 20567518 intron CR45347 + chr2L_11_20565001 chr2L_20565001 RAL-383 685 chr2L 20568640 20568686 chr2L 20569050 20569097 X-element 6 409 1.5 2.0 1.8 2.1 457 chr2L 20568640 intron CR45347 + chr2L 20568868 intron CR45347 + chr2L 20569097 intron CR45347 + chr2L_6_20565001 chr2L_20565001 RAL-383 686 chr2L 20576199 20576240 chr2L 20583687 20583728 blood 7 7485 7.5 2.5 5.0 1.2 7529 chr2L 20576199 intergenic CR45347 + chr2L 20579964 intergenic not near genes chr2L 20583728 3` UTR CR44909 - chr2L_7_20575001 chr2L_20575001 RAL-383 687 chr2L 20607653 20607671 chr2L 20607722 20607722 4 69 0.5 1.0 0.8 2.2 69 chr2L 20607653 intron,3` UTR CR44909 -,CR43608 - chr2L 20607688 intron,3` UTR CR44909 -,CR43608 - chr2L 20607722 intron,3` UTR CR44909 -,CR43608 - chr2L_4_20605001 chr2L_20605001 RAL-383 688 chr2L 20625642 20625677 chr2L 20625905 20625939 7 262 0.0 4.0 2.0 2.3 297 chr2L 20625642 intron CR44909 - chr2L 20625790 3` UTR CR44909 - chr2L 20625939 3` UTR CR44909 - chr2L_7_20625001 chr2L_20625001 RAL-383 689 chr2L 20817818 20817865 chr2L 20817917 20817948 13 96 6.0 5.0 5.5 2.0 130 chr2L 20817818 exon CheB38a - chr2L 20817883 exon CheB38a - chr2L 20817948 exon CheB38a - chr2L_13_20815001 chr2L_20815001 RAL-383 690 chr2L 20821487 20821519 chr2L 20821654 20821687 13 164 3.5 5.0 4.2 2.5 200 chr2L 20821487 intergenic not near genes chr2L 20821587 intergenic not near genes chr2L 20821687 intergenic not near genes chr2L_13_20820001 chr2L_20820001 RAL-383 691 chr2L 20835790 20835840 chr2L 20836527 20836577 Quasimodo 16 735 5.0 3.5 4.2 3.1 787 chr2L 20835790 5` UTR Oseg5 - chr2L 20836184 intergenic Oseg5 -,Spn38F - chr2L 20836577 intergenic Spn38F - chr2L_16_20835001 chr2L_20835001 RAL-383 692 chr2L 20840014 20840056 chr2L 20840236 20840288 16 227 2.5 4.0 3.2 3.8 274 chr2L 20840014 intergenic not near genes chr2L 20840151 intergenic not near genes chr2L 20840288 intergenic CG31676 + chr2L_16_20840001 chr2L_20840001 RAL-383 693 chr2L 20891519 20891544 chr2L 20896640 20896665 jockey 4 5121 1.5 5.0 3.2 1.0 5146 chr2L 20891519 intron,intron CG43739 -,sky - chr2L 20894092 intron,intron CG43739 -,sky - chr2L 20896665 intron,intron CG43739 -,sky - chr2L_4_20890001 chr2L_20890001 RAL-383 694 chr2L 20901471 20901482 chr2L 20902636 20902661 1360 5 1179 0.0 6.5 3.2 1.2 1190 chr2L 20901471 intron,intron CG43739 -,sky - chr2L 20902066 intron,intron CG43739 -,sky - chr2L 20902661 intron,intron CG43739 -,sky - chr2L_5_20900001 chr2L_20900001 RAL-383 695 chr2L 20976639 20976675 chr2L 20981474 20981497 X-element 12 4833 3.0 4.0 3.5 2.7 4858 chr2L 20976639 intron CG42238 - chr2L 20979068 intron CG42238 - chr2L 20981497 intron CG42238 - chr2L_12_20975001 chr2L_20975001 RAL-383 696 chr2L 21020261 21020306 chr2L 21023949 21023961 NOF 8 3688 4.0 3.0 3.5 1.8 3700 chr2L 21020261 intron CG42238 - chr2L 21022111 intron CG42238 - chr2L 21023961 intron CG42238 - chr2L_8_21020001 chr2L_21020001 RAL-383 697 chr2L 21041120 21041162 chr2L 21049401 21049443 Tirant 12 8274 2.5 6.5 4.5 2.2 8323 chr2L 21041120 intron CG42238 - chr2L 21045282 intron CG42238 - chr2L 21049443 intron CG42238 - chr2L_12_21045001 chr2L_21045001 RAL-383 698 chr2L 21074902 21074948 chr2L 21075013 21075048 13 109 5.5 3.5 4.5 2.4 146 chr2L 21074902 intergenic not near genes chr2L 21074975 intergenic tadr + chr2L 21075048 intergenic tadr + chr2L_13_21070001 chr2L_21070001 RAL-383 699 chr2L 21113678 21113718 chr2L 21113781 21113828 17 108 3.0 2.5 2.8 4.5 150 chr2L 21113678 intron Nhe2 + chr2L 21113753 intron Nhe2 + chr2L 21113828 intron Nhe2 + chr2L_17_21110001 chr2L_21110001 RAL-383 700 chr2L 21152858 21152895 chr2L 21152972 21153010 12 113 6.5 8.0 7.2 1.5 152 chr2L 21152858 intergenic not near genes chr2L 21152934 intergenic not near genes chr2L 21153010 intergenic not near genes chr2L_12_21150001 chr2L_21150001 RAL-383 701 chr2L 21267005 21267034 chr2L 21267142 21267171 8 136 1.5 2.0 1.8 2.9 166 chr2L 21267005 intron CG8671 + chr2L 21267088 intron CG8671 + chr2L 21267171 intron CG8671 + chr2L_8_21265001 chr2L_21265001 RAL-383 702 chr2L 21286602 21286631 chr2L 21286685 21286703 8 93 4.0 3.5 3.8 1.7 101 chr2L 21286602 exon Mio - chr2L 21286652 intron Mio - chr2L 21286703 intron Mio - chr2L_8_21285001 chr2L_21285001 RAL-383 703 chr2L 21307450 21307495 chr2L 21307552 21307561 6 96 4.0 1.5 2.8 1.6 111 chr2L 21307450 intron Mio - chr2L 21307506 intron Mio - chr2L 21307561 intron Mio - chr2L_6_21305001 chr2L_21305001 RAL-383 704 chr2L 21347550 21347565 chr2L 21355042 21355056 blood 4 7492 7.0 5.5 6.2 0.6 7506 chr2L 21347550 intron Tsp39D + chr2L 21351303 intron Tsp39D + chr2L 21355056 intron Tsp39D + chr2L_4_21350001 chr2L_21350001 RAL-383 705 chr2L 21347567 21347580 chr2L 21355041 21355072 blood 7 7489 4.0 5.5 4.8 1.2 7505 chr2L 21347567 intron Tsp39D + chr2L 21351320 intron Tsp39D + chr2L 21355072 intron Tsp39D + chr2L_7_21350001 chr2L_21350001 RAL-383 706 chr2L 21597027 21597054 chr2L 21604775 21604818 roo 5 7761 3.0 1.5 2.2 1.6 7791 chr2L 21597027 intergenic not near genes chr2L 21600922 intergenic not near genes chr2L 21604818 intergenic not near genes chr2L_5_21600001 chr2L_21600001 RAL-383 707 chr2L 21653173 21653201 chr2L 21656497 21656525 invader4 7 3323 5.0 6.0 5.5 1.1 3352 chr2L 21653173 intergenic not near genes chr2L 21654849 intergenic not near genes chr2L 21656525 intergenic not near genes chr2L_7_21650001 chr2L_21650001 RAL-383 708 chr2L 21691809 21691835 chr2L 21698299 21698325 Burdock 8 6489 8.5 1.0 4.8 1.4 6516 chr2L 21691809 intron CG31619 + chr2L 21695067 intron CG31619 + chr2L 21698325 intron CG31619 + chr2L_8_21695001 chr2L_21695001 RAL-383 709 chr2L 21754642 21754687 chr2L 21754742 21754788 11 101 2.0 4.5 3.2 2.6 146 chr2L 21754642 intron step - chr2L 21754715 intron step - chr2L 21754788 intron step - chr2L_11_21750001 chr2L_21750001 RAL-383 710 chr2L 21755479 21755518 chr2L 21755623 21755662 10 143 4.5 5.0 4.8 1.7 183 chr2L 21755479 intron step - chr2L 21755570 intron step - chr2L 21755662 intron step - chr2L_10_21755001 chr2L_21755001 RAL-383 711 chr2L 21757558 21757596 chr2L 21757659 21757697 10 98 3.5 1.0 2.2 3.1 139 chr2L 21757558 intergenic step -,CG1416 + chr2L 21757628 intergenic step -,CG1416 + chr2L 21757697 intergenic step -,CG1416 + chr2L_10_21755001 chr2L_21755001 RAL-383 712 chr2L 21855471 21855507 chr2L 21855569 21855614 14 106 1.5 2.5 2.0 4.7 143 chr2L 21855471 intron CR44917 + chr2L 21855542 intron CR44917 + chr2L 21855614 intron CR44917 + chr2L_14_21855001 chr2L_21855001 RAL-383 713 chr2L 21859304 21859350 chr2L 21859404 21859450 13 97 3.0 1.5 2.2 4.1 146 chr2L 21859304 intron CR44917 + chr2L 21859377 intron CR44917 + chr2L 21859450 intron CR44917 + chr2L_13_21855001 chr2L_21855001 RAL-383 714 chr2L 21953796 21953843 chr2L 21954677 21954724 13 883 33.5 34.0 33.8 0.4 928 chr2L 21953796 intergenic not near genes chr2L 21954260 intergenic not near genes chr2L 21954724 intergenic not near genes chr2L_13_21950001 chr2L_21950001 RAL-383 715 chr2L 21981688 21981710 chr2L 21990868 21990870 roo 8 9178 4.5 6.5 5.5 1.2 9182 chr2L 21981688 exon CG2528 - chr2L 21986279 intron CG2528 - chr2L 21990870 exon CG2528 - chr2L_8_21985001 chr2L_21985001 RAL-383 716 chr2L 21994602 21994652 chr2L 21994698 21994748 15 95 4.0 2.5 3.2 3.6 146 chr2L 21994602 intergenic not near genes chr2L 21994675 intergenic not near genes chr2L 21994748 intergenic not near genes chr2L_15_21990001 chr2L_21990001 RAL-383 717 chr2L 22148562 22148603 chr2L 22148647 22148700 20 93 2.0 0.5 1.2 9.1 138 chr2L 22148562 intron CG42748 + chr2L 22148631 intron CG42748 + chr2L 22148700 intron CG42748 + chr2L_20_22145001 chr2L_22145001 RAL-383 718 chr2L 22187428 22187438 chr2L 22187558 22187563 6 129 5.0 5.5 5.2 1.0 135 chr2L 22187428 intergenic not near genes chr2L 22187496 intergenic not near genes chr2L 22187563 intergenic not near genes chr2L_6_22185001 chr2L_22185001 RAL-383 719 chr2L 22192007 22192058 chr2L 22192113 22192167 11 103 4.5 5.0 4.8 1.9 160 chr2L 22192007 intron Ir40a - chr2L 22192087 intron Ir40a - chr2L 22192167 intron Ir40a - chr2L_11_22190001 chr2L_22190001 RAL-383 720 chr2L 22198994 22199049 chr2L 22199104 22199159 9 108 5.0 3.5 4.2 1.7 165 chr2L 22198994 intron Ir40a - chr2L 22199076 intron Ir40a - chr2L 22199159 intron Ir40a - chr2L_9_22195001 chr2L_22195001 RAL-383 721 chr2L 22212124 22212159 chr2L 22212691 22212726 12 567 2.0 3.5 2.8 3.2 602 chr2L 22212124 intron Ir40a - chr2L 22212425 intron Ir40a - chr2L 22212726 exon Ir40a - chr2L_12_22210001 chr2L_22210001 RAL-383 722 chr2L 22214513 22214545 chr2L 22214625 22214657 8 112 2.0 3.0 2.5 2.3 144 chr2L 22214513 intergenic Ir40a - chr2L 22214585 intergenic Ir40a - chr2L 22214657 intergenic Ir40a - chr2L_8_22210001 chr2L_22210001 RAL-383 723 chr2L 22258590 22258632 chr2L 22260735 22260777 G6 6 2145 1.0 2.0 1.5 2.4 2187 chr2L 22258590 intergenic Tif-IA + chr2L 22259684 intergenic not near genes chr2L 22260777 intergenic not near genes chr2L_6_22255001 chr2L_22255001 RAL-383 724 chr2L 22350254 22350296 chr2L 22350368 22350418 8 119 2.5 4.0 3.2 1.9 164 chr2L 22350254 intron CG17018 + chr2L 22350336 intron CG17018 + chr2L 22350418 intron CG17018 + chr2L_8_22350001 chr2L_22350001 RAL-383 725 chr2L 22545961 22546006 chr2L 22546075 22546106 17 110 3.5 2.5 3.0 4.2 145 chr2L 22545961 intron CG17490 + chr2L 22546034 intron CG17490 + chr2L 22546106 intron CG17490 + chr2L_17_22545001 chr2L_22545001 RAL-383 726 chr2L 22548923 22548930 chr2L 22550167 22550175 1360 4 1245 0.0 8.0 4.0 0.8 1252 chr2L 22548923 intergenic CG17490 + chr2L 22549549 intergenic not near genes chr2L 22550175 intergenic CG17493 + chr2L_4_22545001 chr2L_22545001 RAL-383 727 chr2L 22581974 22581991 chr2L 22583783 22583800 S-element 4 1809 3.5 8.5 6.0 0.6 1826 chr2L 22581974 intron CG17494 + chr2L 22582887 intron CG17494 + chr2L 22583800 intron CG17494 + chr2L_4_22580001 chr2L_22580001 RAL-383 728 chr2L 22676109 22676156 chr2L 22676367 22676414 17 258 1.5 2.0 1.8 6.1 305 chr2L 22676109 intron CG40006 - chr2L 22676262 intron CG40006 - chr2L 22676414 intron CG40006 - chr2L_17_22675001 chr2L_22675001 RAL-383 729 chr2L 22679800 22679828 chr2L 22684572 22684579 F-element 7 4781 1.0 1.0 1.0 3.5 4779 chr2L 22679800 intron CG40006 - chr2L 22682190 intron CG40006 - chr2L 22684579 intron CG40006 - chr2L_7_22680001 chr2L_22680001 RAL-383 730 chr2L 22693900 22693949 chr2L 22694007 22694043 8 104 0.0 3.5 1.8 2.9 143 chr2L 22693900 intron CG40006 - chr2L 22693972 intron CG40006 - chr2L 22694043 intron CG40006 - chr2L_8_22690001 chr2L_22690001 RAL-383 731 chr2L 22776400 22776452 chr2L 22778209 22778261 S-element 14 1808 4.0 3.0 3.5 3.1 1861 chr2L 22776400 intergenic not near genes chr2L 22777330 intergenic not near genes chr2L 22778261 intergenic not near genes chr2L_14_22775001 chr2L_22775001 RAL-383 732 chr2L 22983925 22983944 chr2L 22984020 22984030 4 92 2.5 5.0 3.8 0.8 105 chr2L 22983925 intron cta + chr2L 22983978 intron cta + chr2L 22984030 intron cta + chr2L_4_22980001 chr2L_22980001 RAL-383 733 chr2L 22983948 22983967 chr2L 22984019 22984029 6 82 1.5 5.0 3.2 1.4 81 chr2L 22983948 intron cta + chr2L 22983988 intron cta + chr2L 22984029 intron cta + chr2L_6_22980001 chr2L_22980001 RAL-383 734 chr2R 330679 330686 chr2R 332012 332020 4 1334 4.0 3.0 3.5 0.9 1341 chr2R 330679 intergenic not near genes chr2R 331350 intergenic not near genes chr2R 332020 intergenic not near genes chr2R_4_330001 chr2R_330001 RAL-383 735 chr2R 1072740 1072785 chr2R 1075069 1075110 Cr1a 10 2325 25.0 6.0 15.5 0.6 2370 chr2R 1072740 intron rl + chr2R 1073925 intron rl + chr2R 1075110 intron rl + chr2R_10_1070001 chr2R_1070001 RAL-383 736 chr2R 1082377 1082382 chr2R 1087143 1087178 Doc 5 4781 5.0 5.5 5.2 0.8 4801 chr2R 1082377 intron rl + chr2R 1084778 intron rl + chr2R 1087178 intron rl + chr2R_5_1080001 chr2R_1080001 RAL-383 737 chr2R 1516586 1516602 chr2R 1521334 1521350 1731 10 4748 21.0 8.0 14.5 0.6 4764 chr2R 1516586 exon Maf1 - chr2R 1518968 intron Maf1 - chr2R 1521350 5` UTR Maf1 - chr2R_10_1515001 chr2R_1515001 RAL-383 738 chr2R 2015117 2015161 chr2R 2015214 2015258 11 96 5.5 3.0 4.2 2.1 141 chr2R 2015117 intron CG17684 - chr2R 2015188 intron CG17684 - chr2R 2015258 intron CG17684 - chr2R_11_2015001 chr2R_2015001 RAL-383 739 chr2R 2110487 2110499 chr2R 2118065 2118077 17.6 5 7578 2.0 1.5 1.8 1.8 7590 chr2R 2110487 intron CG17684 - chr2R 2114282 intron CG17684 - chr2R 2118077 intron CG17684 - chr2R_5_2110001 chr2R_2110001 RAL-383 740 chr2R 2498974 2499016 chr2R 2508141 2508171 roo 13 9166 3.5 5.0 4.2 2.5 9197 chr2R 2498974 intron MFS17 - chr2R 2503572 intron MFS17 - chr2R 2508171 intron MFS17 - chr2R_13_2500001 chr2R_2500001 RAL-383 741 chr2R 2508293 2508337 chr2R 2508450 2508494 11 156 2.5 5.5 4.0 2.2 201 chr2R 2508293 intron MFS17 - chr2R 2508394 intron MFS17 - chr2R 2508494 intron MFS17 - chr2R_11_2505001 chr2R_2505001 RAL-383 742 chr2R 3130222 3130254 chr2R 3130311 3130361 9 103 4.0 2.5 3.2 2.1 139 chr2R 3130222 intron CG42596 + chr2R 3130292 intron CG42596 + chr2R 3130361 intron CG42596 + chr2R_9_3130001 chr2R_3130001 RAL-383 743 chr2R 3144093 3144102 chr2R 3393391 3393400 Doc 5 249298 20.0 21.5 20.8 0.2 249307 chr2R 3144093 intron CG42596 + chr2R 3268746 intergenic not near genes chr2R 3393400 intergenic not near genes chr2R_5_3265001 chr2R_3265001 RAL-383 744 chr2R 3291924 3292102 chr2R 3915113 3915283 8 623186 12.0 18.0 15.0 0.5 623359 chr2R 3291924 intergenic not near genes chr2R 3603604 intergenic not near genes chr2R 3915283 intron uex - chr2R_8_3600001 chr2R_3600001 RAL-383 745 chr2R 3293728 3293766 chr2R 3293821 3293854 4 92 5.0 4.0 4.5 0.7 126 chr2R 3293728 intergenic not near genes chr2R 3293791 intergenic not near genes chr2R 3293854 intergenic not near genes chr2R_4_3290001 chr2R_3290001 RAL-383 746 chr2R 3583041 3583074 chr2R 3583137 3583170 5 96 3.5 1.0 2.2 1.6 129 chr2R 3583041 intergenic not near genes chr2R 3583106 intergenic not near genes chr2R 3583170 intergenic not near genes chr2R_5_3580001 chr2R_3580001 RAL-383 747 chr2R 4015298 4015348 chr2R 4015491 4015541 15 192 3.0 3.5 3.2 3.6 243 chr2R 4015298 intron Haspin + chr2R 4015420 intron Haspin + chr2R 4015541 intron Haspin + chr2R_15_4015001 chr2R_4015001 RAL-383 748 chr2R 4387297 4387309 chr2R 4387468 4387480 4 171 8.0 0.0 4.0 0.8 183 chr2R 4387297 intron Gprk1 - chr2R 4387388 intron Gprk1 - chr2R 4387480 intron Gprk1 - chr2R_4_4385001 chr2R_4385001 RAL-383 749 chr2R 4621299 4621346 chr2R 4621859 4621905 12 556 2.0 2.0 2.0 4.0 606 chr2R 4621299 3` UTR CR44101 - chr2R 4621602 3` UTR CR44101 - chr2R 4621905 3` UTR CR44101 - chr2R_12_4620001 chr2R_4620001 RAL-383 750 chr2R 4622935 4622971 chr2R 4624110 4624142 1360 4 1172 1.5 6.5 4.0 0.8 1207 chr2R 4622935 intergenic CR44101 - chr2R 4623538 intergenic not near genes chr2R 4624142 intergenic not near genes chr2R_4_4620001 chr2R_4620001 RAL-383 751 chr2R 4731939 4731978 chr2R 4732042 4732081 8 103 1.5 5.5 3.5 1.8 142 chr2R 4731939 intergenic not near genes chr2R 4732010 intergenic not near genes chr2R 4732081 intergenic not near genes chr2R_8_4730001 chr2R_4730001 RAL-383 752 chr2R 4751713 4751722 chr2R 4751826 4751836 5 114 2.0 5.5 3.8 1.0 123 chr2R 4751713 intron conu + chr2R 4751774 intron conu + chr2R 4751836 intron conu + chr2R_5_4750001 chr2R_4750001 RAL-383 753 chr2R 5062757 5062800 chr2R 5062871 5062901 8 106 1.5 6.0 3.8 1.7 144 chr2R 5062757 intergenic not near genes chr2R 5062829 intergenic not near genes chr2R 5062901 intergenic not near genes chr2R_8_5060001 chr2R_5060001 RAL-383 754 chr2R 5192699 5192718 chr2R 5192796 5192815 9 97 3.0 3.0 3.0 2.2 116 chr2R 5192699 intron Nipped-A - chr2R 5192757 intron Nipped-A - chr2R 5192815 intron Nipped-A - chr2R_9_5190001 chr2R_5190001 RAL-383 755 chr2R 5209764 5209810 chr2R 5210317 5210363 18 551 4.5 11.0 7.8 2.0 599 chr2R 5209764 intron Nipped-A - chr2R 5210064 intron Nipped-A - chr2R 5210363 intron Nipped-A - chr2R_18_5210001 chr2R_5210001 RAL-383 756 chr2R 5240214 5240232 chr2R 5240300 5240318 7 89 7.0 7.5 7.2 0.9 104 chr2R 5240214 intron Nipped-A - chr2R 5240266 intron Nipped-A - chr2R 5240318 intron Nipped-A - chr2R_7_5240001 chr2R_5240001 RAL-383 757 chr2R 5363470 5363498 chr2R 5363568 5363596 7 98 6.5 3.0 4.8 1.2 126 chr2R 5363470 5` UTR CR42646 + chr2R 5363533 intron CR42646 + chr2R 5363596 intron CR42646 + chr2R_7_5360001 chr2R_5360001 RAL-383 758 chr2R 5396237 5396284 chr2R 5396495 5396541 10 258 18.0 17.0 17.5 0.5 304 chr2R 5396237 intergenic not near genes chr2R 5396389 intergenic not near genes chr2R 5396541 intergenic not near genes chr2R_10_5395001 chr2R_5395001 RAL-383 759 chr2R 5417980 5418024 chr2R 5420632 5420675 Burdock 7 2651 5.0 2.0 3.5 1.6 2695 chr2R 5417980 intron laccase2 + chr2R 5419328 intron laccase2 + chr2R 5420675 intron laccase2 + chr2R_7_5415001 chr2R_5415001 RAL-383 760 chr2R 5473349 5473393 chr2R 5473464 5473484 12 109 1.0 2.5 1.8 4.3 135 chr2R 5473349 intron CG30440 - chr2R 5473416 intron CG30440 - chr2R 5473484 intron CG30440 - chr2R_12_5470001 chr2R_5470001 RAL-383 761 chr2R 5581406 5581411 chr2R 5627635 5627640 4 46228 13.0 8.5 10.8 0.3 46234 chr2R 5581406 intergenic not near genes chr2R 5604523 intron Fis1 - chr2R 5627640 intergenic not near genes chr2R_4_5600001 chr2R_5600001 RAL-383 762 chr2R 5682639 5682688 chr2R 5682750 5682795 13 108 6.5 2.5 4.5 2.4 156 chr2R 5682639 intron scaf - chr2R 5682717 intron scaf - chr2R 5682795 intron scaf - chr2R_13_5680001 chr2R_5680001 RAL-383 763 chr2R 5701734 5701783 chr2R 5701834 5701865 8 95 4.0 3.5 3.8 1.7 131 chr2R 5701734 intergenic vlc + chr2R 5701800 intergenic vlc + chr2R 5701865 intergenic vlc + chr2R_8_5700001 chr2R_5700001 RAL-383 764 chr2R 5606794 5606836 chr2R 5736777 5736804 4 129973 10.0 12.0 11.0 0.3 130010 chr2R 5606794 intergenic not near genes chr2R 5671799 5` UTR kune + chr2R 5736804 intergenic not near genes chr2R_4_5670001 chr2R_5670001 RAL-383 765 chr2R 5837262 5837288 chr2R 5837361 5837378 4 97 3.5 4.5 4.0 0.8 116 chr2R 5837262 intron dpr12 + chr2R 5837320 intron dpr12 + chr2R 5837378 intron dpr12 + chr2R_4_5835001 chr2R_5835001 RAL-383 766 chr2R 5848954 5848979 chr2R 5849063 5849083 6 111 3.0 3.5 3.2 1.4 129 chr2R 5848954 intron dpr12 + chr2R 5849018 intron dpr12 + chr2R 5849083 intron dpr12 + chr2R_6_5845001 chr2R_5845001 RAL-383 767 chr2R 5852018 5852057 chr2R 5852139 5852181 6 124 3.0 1.5 2.2 1.9 163 chr2R 5852018 intron dpr12 + chr2R 5852100 intron dpr12 + chr2R 5852181 intron dpr12 + chr2R_6_5850001 chr2R_5850001 RAL-383 768 chr2R 5869257 5869306 chr2R 5874353 5874387 flea 18 5095 4.0 5.0 4.5 3.3 5130 chr2R 5869257 intergenic not near genes chr2R 5871822 intergenic not near genes chr2R 5874387 intergenic not near genes chr2R_18_5870001 chr2R_5870001 RAL-383 769 chr2R 5876854 5876902 chr2R 5876971 5877024 13 116 1.0 2.5 1.8 4.6 170 chr2R 5876854 intergenic not near genes chr2R 5876939 intergenic not near genes chr2R 5877024 intergenic not near genes chr2R_13_5875001 chr2R_5875001 RAL-383 770 chr2R 5878922 5878955 chr2R 5879021 5879031 7 94 2.0 6.0 4.0 1.4 109 chr2R 5878922 intergenic CG44438 - chr2R 5878976 intergenic CG44438 - chr2R 5879031 intergenic CG44438 - chr2R_7_5875001 chr2R_5875001 RAL-383 771 chr2R 5885353 5885378 chr2R 5885501 5885527 10 149 4.0 4.5 4.2 1.9 174 chr2R 5885353 5` UTR CR44125 + chr2R 5885440 5` UTR CR44125 + chr2R 5885527 5` UTR CR44125 + chr2R_10_5885001 chr2R_5885001 RAL-383 772 chr2R 5902153 5902166 chr2R 5909722 5909743 17.6 7 7577 4.5 3.0 3.8 1.5 7590 chr2R 5902153 intron CG43366 + chr2R 5905948 intron CG43366 + chr2R 5909743 intron CG43366 + chr2R_7_5905001 chr2R_5905001 RAL-383 773 chr2R 5947914 5947967 chr2R 5948085 5948106 11 165 4.5 0.0 2.2 3.4 192 chr2R 5947914 intergenic not near genes chr2R 5948010 intergenic not near genes chr2R 5948106 intergenic not near genes chr2R_11_5945001 chr2R_5945001 RAL-383 774 chr2R 5978968 5979016 chr2R 5979204 5979251 12 236 4.5 7.0 5.8 1.8 283 chr2R 5978968 intron mle - chr2R 5979110 intron mle - chr2R 5979251 intron mle - chr2R_12_5975001 chr2R_5975001 RAL-383 775 chr2R 6037435 6037477 chr2R 6037540 6037582 16 103 1.5 3.5 2.5 4.6 147 chr2R 6037435 intron CG14591 - chr2R 6037508 intron CG14591 - chr2R 6037582 intron CG14591 - chr2R_16_6035001 chr2R_6035001 RAL-383 776 chr2R 6086438 6086485 chr2R 6087326 6087373 15 887 1.0 2.0 1.5 6.0 935 chr2R 6086438 intergenic not near genes chr2R 6086906 intergenic not near genes chr2R 6087373 intergenic not near genes chr2R_15_6085001 chr2R_6085001 RAL-383 777 chr2R 6096714 6096737 chr2R 6101913 6101945 BS 5 5202 6.0 4.0 5.0 0.8 5231 chr2R 6096714 intron EcR - chr2R 6099330 intron EcR - chr2R 6101945 intron EcR - chr2R_5_6095001 chr2R_6095001 RAL-383 778 chr2R 6129315 6129351 chr2R 6129413 6129449 9 96 3.0 3.0 3.0 2.2 134 chr2R 6129315 intron EcR - chr2R 6129382 intron EcR - chr2R 6129449 intron EcR - chr2R_9_6125001 chr2R_6125001 RAL-383 779 chr2R 6144388 6144438 chr2R 6144492 6144542 23 104 5.5 6.5 6.0 3.3 154 chr2R 6144388 intron EcR - chr2R 6144465 intron EcR - chr2R 6144542 intron EcR - chr2R_23_6140001 chr2R_6140001 RAL-383 780 chr2R 6168190 6168227 chr2R 6168292 6168329 12 100 5.5 4.0 4.8 2.1 139 chr2R 6168190 intron EcR - chr2R 6168260 intron EcR - chr2R 6168329 intron EcR - chr2R_12_6165001 chr2R_6165001 RAL-383 781 chr2R 6178101 6178142 chr2R 6178247 6178287 12 146 4.0 3.5 3.8 2.5 186 chr2R 6178101 intergenic not near genes chr2R 6178194 intergenic not near genes chr2R 6178287 intergenic not near genes chr2R_12_6175001 chr2R_6175001 RAL-383 782 chr2R 6194666 6194698 chr2R 6194768 6194800 7 101 3.5 3.5 3.5 1.6 134 chr2R 6194666 intron Ptr - chr2R 6194733 intron Ptr - chr2R 6194800 intron Ptr - chr2R_7_6190001 chr2R_6190001 RAL-383 783 chr2R 6494528 6494551 chr2R 6499310 6499333 F-element 6 4782 2.0 1.5 1.8 2.1 4805 chr2R 6494528 intergenic not near genes chr2R 6496930 intergenic not near genes chr2R 6499333 intergenic not near genes chr2R_6_6495001 chr2R_6495001 RAL-383 784 chr2R 6530750 6530794 chr2R 6530850 6530894 19 98 4.0 4.5 4.2 3.7 144 chr2R 6530750 intron jing + chr2R 6530822 intron jing + chr2R 6530894 intron jing + chr2R_19_6530001 chr2R_6530001 RAL-383 785 chr2R 6541055 6541097 chr2R 6541151 6541188 10 95 5.0 5.0 5.0 1.7 133 chr2R 6541055 intron jing + chr2R 6541122 intron jing + chr2R 6541188 intron jing + chr2R_10_6540001 chr2R_6540001 RAL-383 786 chr2R 6551992 6552000 chr2R 6552113 6552121 6 122 3.5 2.5 3.0 1.5 129 chr2R 6551992 intron jing + chr2R 6552056 intron jing + chr2R 6552121 intron jing + chr2R_6_6550001 chr2R_6550001 RAL-383 787 chr2R 6579752 6579795 chr2R 6584858 6584901 flea 12 5106 5.0 3.5 4.2 2.3 5149 chr2R 6579752 intron jing + chr2R 6582326 intron jing + chr2R 6584901 intron jing + chr2R_12_6580001 chr2R_6580001 RAL-383 788 chr2R 6612137 6612161 chr2R 6612212 6612261 8 90 3.0 4.5 3.8 1.7 124 chr2R 6612137 intron jing + chr2R 6612199 intron jing + chr2R 6612261 intron jing + chr2R_8_6610001 chr2R_6610001 RAL-383 789 chr2R 6633176 6633226 chr2R 6633273 6633322 19 96 2.0 1.5 1.8 6.8 146 chr2R 6633176 intergenic Vha16-1 -,Trap1 - chr2R 6633249 intergenic Vha16-1 -,Trap1 - chr2R 6633322 intergenic Vha16-1 -,Trap1 - chr2R_19_6630001 chr2R_6630001 RAL-383 790 chr2R 6646783 6646824 chr2R 6647076 6647117 10 291 4.5 3.5 4.0 2.0 334 chr2R 6646783 intergenic not near genes chr2R 6646950 intergenic not near genes chr2R 6647117 intergenic not near genes chr2R_10_6645001 chr2R_6645001 RAL-383 791 chr2R 6699572 6699618 chr2R 6699677 6699723 18 104 3.5 1.5 2.5 5.1 151 chr2R 6699572 intergenic Rab2 + chr2R 6699648 intergenic Rab2 + chr2R 6699723 intergenic Rab2 +,CG3409 -,CG45092 - chr2R_18_6695001 chr2R_6695001 RAL-383 792 chr2R 6895391 6895428 chr2R 6895490 6895505 11 89 1.0 1.0 1.0 5.5 114 chr2R 6895391 intron CG30158 + chr2R 6895448 intron CG30158 + chr2R 6895505 intron CG30158 + chr2R_11_6895001 chr2R_6895001 RAL-383 793 chr2R 6952150 6952181 chr2R 6959750 6959781 opus 8 7600 4.5 2.5 3.5 1.8 7631 chr2R 6952150 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R 6955966 intron,intron mim -,CheB42c - chr2R 6959781 intron,intron mim -,CheB42c - chr2R_8_6955001 chr2R_6955001 RAL-383 794 chr2R 6964262 6964291 chr2R 6964359 6964387 8 96 10.5 4.0 7.2 1.0 125 chr2R 6964262 intron,intron mim -,CheB42c - chr2R 6964324 intron,intron mim -,CheB42c - chr2R 6964387 intron,intron mim -,CheB42c - chr2R_8_6960001 chr2R_6960001 RAL-383 795 chr2R 6978621 6978662 chr2R 6978824 6978865 15 202 3.0 1.5 2.2 4.7 244 chr2R 6978621 intron vimar - chr2R 6978743 intron vimar - chr2R 6978865 intron vimar - chr2R_15_6975001 chr2R_6975001 RAL-383 796 chr2R 7160538 7160583 chr2R 7160636 7160681 12 98 3.0 4.5 3.8 2.5 143 chr2R 7160538 intron pk + chr2R 7160610 intron pk + chr2R 7160681 intron pk + chr2R_12_7160001 chr2R_7160001 RAL-383 797 chr2R 7164250 7164288 chr2R 7164461 7164499 15 208 2.5 2.5 2.5 4.3 249 chr2R 7164250 intron pk + chr2R 7164374 intron pk + chr2R 7164499 intron pk + chr2R_15_7160001 chr2R_7160001 RAL-383 798 chr2R 7196551 7196595 chr2R 7201341 7201390 F-element 11 4793 4.5 7.0 5.8 1.6 4839 chr2R 7196551 intron pk + chr2R 7198970 intron pk + chr2R 7201390 intron pk + chr2R_11_7195001 chr2R_7195001 RAL-383 799 chr2R 7209849 7209872 chr2R 7217587 7217639 roo 9 7764 7.5 4.5 6.0 1.3 7790 chr2R 7209849 intron pk + chr2R 7213744 intron pk + chr2R 7217639 intron pk + chr2R_9_7210001 chr2R_7210001 RAL-383 800 chr2R 7235812 7235846 chr2R 7240913 7240958 jockey 7 5105 2.5 2.0 2.2 2.2 5146 chr2R 7235812 intergenic not near genes chr2R 7238385 intergenic not near genes chr2R 7240958 intergenic not near genes chr2R_7_7235001 chr2R_7235001 RAL-383 801 chr2R 7310750 7310789 chr2R 7310847 7310873 6 88 5.5 1.0 3.2 1.4 123 chr2R 7310750 intergenic not near genes chr2R 7310812 intergenic not near genes chr2R 7310873 intergenic not near genes chr2R_6_7310001 chr2R_7310001 RAL-383 802 chr2R 7389553 7389587 chr2R 7389675 7389703 4 120 5.5 5.5 5.5 0.6 150 chr2R 7389553 intron CG11107 + chr2R 7389628 intron CG11107 + chr2R 7389703 intron CG11107 + chr2R_4_7385001 chr2R_7385001 RAL-383 803 chr2R 7417884 7418166 chr2R 7417990 7418265 13 98 6.0 7.0 6.5 1.7 381 chr2R 7417884 intergenic not near genes chr2R 7418074 intergenic not near genes chr2R 7418265 intergenic not near genes chr2R_13_7415001 chr2R_7415001 RAL-383 804 chr2R 7434879 7434911 chr2R 7439200 7439231 Juan 9 4321 9.5 2.5 6.0 1.3 4352 chr2R 7434879 intergenic so + chr2R 7437055 intergenic not near genes chr2R 7439231 intergenic not near genes chr2R_9_7435001 chr2R_7435001 RAL-383 805 chr2R 7459268 7459281 chr2R 7459376 7459389 5 108 5.5 3.0 4.2 1.0 121 chr2R 7459268 intergenic Inos -,CG11141 - chr2R 7459328 intergenic CG11141 -,Inos - chr2R 7459389 intergenic CG11141 - chr2R_5_7455001 chr2R_7455001 RAL-383 806 chr2R 7608391 7608427 chr2R 7613612 7613650 I-element 9 5219 7.0 8.5 7.8 1.0 5259 chr2R 7608391 intron CG1358 - chr2R 7611020 intron CG1358 - chr2R 7613650 intron CG1358 - chr2R_9_7610001 chr2R_7610001 RAL-383 807 chr2R 7642847 7642890 chr2R 7642947 7642990 22 99 4.0 3.5 3.8 4.6 143 chr2R 7642847 intron CG43340 + chr2R 7642918 intron CG43340 + chr2R 7642990 intron CG43340 + chr2R_22_7640001 chr2R_7640001 RAL-383 808 chr2R 7737890 7738189 chr2R 7737989 7738286 6 97 10.0 3.0 6.5 0.8 396 chr2R 7737890 intergenic not near genes chr2R 7738088 intergenic not near genes chr2R 7738286 intergenic not near genes chr2R_6_7735001 chr2R_7735001 RAL-383 809 chr2R 7750798 7750821 chr2R 7750890 7750918 5 94 0.0 6.5 3.2 1.2 120 chr2R 7750798 intron,intron CG30497 -,CG45093 - chr2R 7750858 intron,intron CG30497 -,CG45093 - chr2R 7750918 intron,intron CG30497 -,CG45093 - chr2R_5_7750001 chr2R_7750001 RAL-383 810 chr2R 7815653 7815700 chr2R 7822142 7822187 Burdock 9 6488 3.0 4.0 3.5 2.0 6534 chr2R 7815653 intergenic CG1882 + chr2R 7818920 intergenic not near genes chr2R 7822187 3` UTR cathD - chr2R_9_7815001 chr2R_7815001 RAL-383 811 chr2R 7862211 7862250 chr2R 7867345 7867381 flea 4 5130 2.0 2.0 2.0 1.3 5170 chr2R 7862211 intron Dgk - chr2R 7864796 intron Dgk - chr2R 7867381 intron Dgk - chr2R_4_7860001 chr2R_7860001 RAL-383 812 chr2R 7869177 7869208 chr2R 7873983 7873993 Doc 5 4802 5.5 8.0 6.8 0.6 4816 chr2R 7869177 intron Dgk - chr2R 7871585 intron Dgk - chr2R 7873993 intron Dgk - chr2R_5_7870001 chr2R_7870001 RAL-383 813 chr2R 7942928 7942960 chr2R 7943192 7943201 11 270 2.5 5.0 3.8 2.3 273 chr2R 7942928 intron CG14764 - chr2R 7943064 intron CG14764 - chr2R 7943201 intron CG14764 - chr2R_11_7940001 chr2R_7940001 RAL-383 814 chr2R 7997421 7997445 chr2R 7997546 7997571 12 125 1.5 6.0 3.8 2.5 150 chr2R 7997421 intron Hey - chr2R 7997496 intron Hey - chr2R 7997571 intron Hey - chr2R_12_7995001 chr2R_7995001 RAL-383 815 chr2R 7999581 7999588 chr2R 7999684 7999691 5 102 2.0 1.5 1.8 1.8 110 chr2R 7999581 intergenic not near genes chr2R 7999636 intergenic not near genes chr2R 7999691 intergenic not near genes chr2R_5_7995001 chr2R_7995001 RAL-383 816 chr2R 8015651 8015682 chr2R 8017690 8017693 4 2024 3.0 1.0 2.0 1.3 2042 chr2R 8015651 intergenic mir-4981 + chr2R 8016672 intergenic not near genes chr2R 8017693 intergenic not near genes chr2R_4_8015001 chr2R_8015001 RAL-383 817 chr2R 8089238 8089285 chr2R 8089342 8089391 13 106 3.0 5.5 4.2 2.5 153 chr2R 8089238 3` UTR sut2 + chr2R 8089314 intergenic sut2 +,sut3 + chr2R 8089391 intergenic sut3 +,sut2 + chr2R_13_8085001 chr2R_8085001 RAL-383 818 chr2R 8155565 8155583 chr2R 8155674 8155692 7 107 4.0 2.0 3.0 1.8 127 chr2R 8155565 intron,intron Lpin -,kermit - chr2R 8155628 intron,intron Lpin -,kermit - chr2R 8155692 intron,intron Lpin -,kermit - chr2R_7_8155001 chr2R_8155001 RAL-383 819 chr2R 8155585 8155612 chr2R 8155671 8155721 10 96 1.5 2.0 1.8 3.6 136 chr2R 8155585 intron,intron Lpin -,kermit - chr2R 8155653 intron,intron Lpin -,kermit - chr2R 8155721 intron,intron Lpin -,kermit - chr2R_10_8155001 chr2R_8155001 RAL-383 820 chr2R 8157890 8157909 chr2R 8157989 8158017 6 106 4.5 2.5 3.5 1.3 127 chr2R 8157890 5` UTR CR44068 + chr2R 8157954 5` UTR CR44068 + chr2R 8158017 5` UTR CR44068 + chr2R_6_8155001 chr2R_8155001 RAL-383 821 chr2R 8305468 8305509 chr2R 8305573 8305613 9 102 4.0 3.5 3.8 1.9 145 chr2R 8305468 intergenic CR44447 + chr2R 8305540 intergenic CR44447 + chr2R 8305613 intergenic not near genes chr2R_9_8305001 chr2R_8305001 RAL-383 822 chr2R 8330851 8330889 chr2R 8331346 8331395 roo 15 503 2.0 8.0 5.0 2.5 544 chr2R 8330851 intron pdm3 + chr2R 8331123 intron pdm3 + chr2R 8331395 intron pdm3 + chr2R_15_8330001 chr2R_8330001 RAL-383 823 chr2R 8381995 8382050 chr2R 8382094 8382148 16 98 4.0 8.0 6.0 2.3 153 chr2R 8381995 intron pdm3 + chr2R 8382072 intron pdm3 + chr2R 8382148 intron pdm3 + chr2R_16_8380001 chr2R_8380001 RAL-383 824 chr2R 8478199 8478251 chr2R 8478310 8478358 11 103 6.0 7.0 6.5 1.5 159 chr2R 8478199 intron mtt - chr2R 8478278 intron mtt - chr2R 8478358 intron mtt - chr2R_11_8475001 chr2R_8475001 RAL-383 825 chr2R 8518786 8518798 chr2R 12066275 12066284 4 3547487 16.0 0.0 8.0 0.4 3547498 chr2R 8518786 intron mtt - chr2R 10292535 intron CAP + chr2R 12066284 intron CG8888 - chr2R_4_10290001 chr2R_10290001 RAL-383 826 chr2R 8607481 8607530 chr2R 8607662 8607711 13 180 4.0 4.5 4.2 2.5 230 chr2R 8607481 intron rgr + chr2R 8607596 intron rgr + chr2R 8607711 intron rgr + chr2R_13_8605001 chr2R_8605001 RAL-383 827 chr2R 8722745 8722794 chr2R 8723006 8723043 pogo 12 256 3.0 4.0 3.5 2.7 298 chr2R 8722745 intron CG14767 - chr2R 8722894 intron CG14767 - chr2R 8723043 intron CG14767 - chr2R_12_8720001 chr2R_8720001 RAL-383 828 chr2R 8768192 8768215 chr2R 8768279 8768313 4 91 2.5 2.5 2.5 1.1 121 chr2R 8768192 intergenic CR44278 - chr2R 8768252 intergenic CR44278 - chr2R 8768313 3` UTR CR44278 - chr2R_4_8765001 chr2R_8765001 RAL-383 829 chr2R 8954383 8954424 chr2R 8954491 8954532 10 105 1.5 3.0 2.2 3.1 149 chr2R 8954383 intron babo + chr2R 8954458 intron babo + chr2R 8954532 intron babo + chr2R_10_8950001 chr2R_8950001 RAL-383 830 chr2R 8966139 8966180 chr2R 8966247 8966290 20 107 3.5 4.5 4.0 4.0 151 chr2R 8966139 intron CG8216 - chr2R 8966214 intron CG8216 - chr2R 8966290 intron CG8216 - chr2R_20_8965001 chr2R_8965001 RAL-383 831 chr2R 8989630 8989660 chr2R 8989733 8989757 10 102 1.5 1.5 1.5 4.0 127 chr2R 8989630 intergenic not near genes chr2R 8989694 intergenic not near genes chr2R 8989757 intergenic not near genes chr2R_10_8985001 chr2R_8985001 RAL-383 832 chr2R 9031962 9032001 chr2R 9032059 9032098 18 95 4.5 7.0 5.8 2.6 136 chr2R 9031962 intergenic not near genes chr2R 9032030 intergenic not near genes chr2R 9032098 intergenic not near genes chr2R_18_9030001 chr2R_9030001 RAL-383 833 chr2R 9065899 9065940 chr2R 9065995 9066042 15 101 5.5 3.0 4.2 2.9 143 chr2R 9065899 intron ana + chr2R 9065970 intron ana + chr2R 9066042 intron ana + chr2R_15_9065001 chr2R_9065001 RAL-383 834 chr2R 9236591 9236604 chr2R 9236698 9236711 6 107 10.5 3.5 7.0 0.8 120 chr2R 9236591 intron hig - chr2R 9236651 intron hig - chr2R 9236711 intron hig - chr2R_6_9235001 chr2R_9235001 RAL-383 835 chr2R 9236606 9236623 chr2R 9236691 9236730 7 104 6.0 2.0 4.0 1.4 124 chr2R 9236606 intron hig - chr2R 9236668 intron hig - chr2R 9236730 intron hig - chr2R_7_9235001 chr2R_9235001 RAL-383 836 chr2R 9380423 9380466 chr2R 9380542 9380585 13 118 5.0 2.0 3.5 2.9 162 chr2R 9380423 intron CG13954 - chr2R 9380504 intron CG13954 - chr2R 9380585 intron CG13954 - chr2R_13_9380001 chr2R_9380001 RAL-383 837 chr2R 9382227 9382271 chr2R 9382329 9382373 15 100 3.5 4.0 3.8 3.1 146 chr2R 9382227 intron CG13954 - chr2R 9382300 intron CG13954 - chr2R 9382373 intron CG13954 - chr2R_15_9380001 chr2R_9380001 RAL-383 838 chr2R 9412063 9412090 chr2R 9412193 9412220 5 130 5.5 5.5 5.5 0.8 157 chr2R 9412063 intron wun - chr2R 9412142 intron wun - chr2R 9412220 intron wun - chr2R_5_9410001 chr2R_9410001 RAL-383 839 chr2R 9469721 9469747 chr2R 9469822 9469847 7 99 2.5 1.5 2.0 2.3 126 chr2R 9469721 intron Camta + chr2R 9469784 intron Camta + chr2R 9469847 exon Camta + chr2R_7_9465001 chr2R_9465001 RAL-383 840 chr2R 9480074 9480110 chr2R 9490625 9490641 roo 7 10548 3.5 6.5 5.0 1.2 10567 chr2R 9480074 intergenic not near genes chr2R 9485358 intergenic not near genes chr2R 9490641 intergenic not near genes chr2R_7_9485001 chr2R_9485001 RAL-383 841 chr2R 9541624 9541651 chr2R 9541721 9541748 5 97 0.0 5.5 2.8 1.3 124 chr2R 9541624 intergenic brp +,CG1888 - chr2R 9541686 intergenic brp +,CG1888 - chr2R 9541748 intergenic brp +,CG1888 - chr2R_5_9540001 chr2R_9540001 RAL-383 842 chr2R 9605810 9605859 chr2R 9605937 9605986 12 127 4.5 3.0 3.8 2.5 176 chr2R 9605810 3` UTR CR44285 - chr2R 9605898 intergenic CR44285 -,GstT1 +,CG1902 + chr2R 9605986 intergenic GstT1 +,CR44285 -,CG1902 + chr2R_12_9605001 chr2R_9605001 RAL-383 843 chr2R 9653247 9653276 chr2R 9653343 9653380 11 103 2.5 2.0 2.2 3.4 133 chr2R 9653247 intron Mmp2 - chr2R 9653314 intron Mmp2 - chr2R 9653380 intron Mmp2 - chr2R_11_9650001 chr2R_9650001 RAL-383 844 chr2R 9697228 9697275 chr2R 9697337 9697384 18 108 3.0 9.0 6.0 2.6 156 chr2R 9697228 intergenic not near genes chr2R 9697306 intergenic not near genes chr2R 9697384 intergenic not near genes chr2R_18_9695001 chr2R_9695001 RAL-383 845 chr2R 9726602 9726639 chr2R 9734172 9734210 17.6 8 7569 4.0 5.0 4.5 1.5 7608 chr2R 9726602 intron sqa - chr2R 9730406 intron sqa - chr2R 9734210 intron sqa - chr2R_8_9730001 chr2R_9730001 RAL-383 846 chr2R 9746555 9746571 chr2R 9747868 9747884 4 1314 24.5 23.0 23.8 0.2 1329 chr2R 9746555 5` UTR sqa - chr2R 9747220 5` UTR sqa - chr2R 9747884 5` UTR sqa - chr2R_4_9745001 chr2R_9745001 RAL-383 847 chr2R 9746553 9746587 chr2R 9747894 9747918 11 1322 26.0 23.5 24.8 0.4 1365 chr2R 9746553 5` UTR sqa - chr2R 9747236 5` UTR sqa - chr2R 9747918 5` UTR sqa - chr2R_11_9745001 chr2R_9745001 RAL-383 848 chr2R 9770065 9770095 chr2R 9770179 9770209 5 114 1.5 7.0 4.2 1.0 144 chr2R 9770065 intron CG1688 - chr2R 9770137 intron CG1688 - chr2R 9770209 intron CG1688 - chr2R_5_9770001 chr2R_9770001 RAL-383 849 chr2R 9862740 9862785 chr2R 9862834 9862876 11 94 4.5 2.0 3.2 2.6 136 chr2R 9862740 intergenic not near genes chr2R 9862808 intergenic not near genes chr2R 9862876 intergenic not near genes chr2R_11_9860001 chr2R_9860001 RAL-383 850 chr2R 9871046 9871058 chr2R 9871552 9871557 roo 4 504 0.5 10.5 5.5 0.6 511 chr2R 9871046 intron cbx - chr2R 9871302 intron cbx - chr2R 9871557 intron,5` UTR cbx -,CG18446 + chr2R_4_9870001 chr2R_9870001 RAL-383 851 chr2R 9923835 9923884 chr2R 9923937 9923981 13 95 2.0 3.0 2.5 3.7 146 chr2R 9923835 intron Mef2 - chr2R 9923908 intron Mef2 - chr2R 9923981 intron Mef2 - chr2R_13_9920001 chr2R_9920001 RAL-383 852 chr2R 9950281 9950327 chr2R 9950374 9950424 10 96 3.5 3.0 3.2 2.4 143 chr2R 9950281 intron Mef2 - chr2R 9950352 intron Mef2 - chr2R 9950424 intron Mef2 - chr2R_10_9950001 chr2R_9950001 RAL-383 853 chr2R 10017631 10017676 chr2R 10017729 10017775 13 97 1.0 5.0 3.0 3.2 144 chr2R 10017631 intron Pka-R2 - chr2R 10017703 intron Pka-R2 - chr2R 10017775 intron Pka-R2 - chr2R_13_10015001 chr2R_10015001 RAL-383 854 chr2R 10047798 10047828 chr2R 10047901 10047931 7 100 5.0 3.5 4.2 1.3 133 chr2R 10047798 intron oys - chr2R 10047864 intron oys - chr2R 10047931 intron oys - chr2R_7_10045001 chr2R_10045001 RAL-383 855 chr2R 10054411 10054454 chr2R 10054577 10054622 6 163 1.0 2.0 1.5 2.4 211 chr2R 10054411 intron,exon magu +,Def - chr2R 10054516 intron,exon magu +,Def - chr2R 10054622 intron magu + chr2R_6_10050001 chr2R_10050001 RAL-383 856 chr2R 10132170 10132215 chr2R 10132270 10132315 10 96 1.0 1.5 1.2 4.5 145 chr2R 10132170 intron gem + chr2R 10132242 intron gem + chr2R 10132315 exon gem + chr2R_10_10130001 chr2R_10130001 RAL-383 857 chr2R 10176865 10176878 chr2R 10186049 10186065 roo 8 9187 10.5 4.5 7.5 0.9 9200 chr2R 10176865 intron KCNQ - chr2R 10181465 intron KCNQ - chr2R 10186065 intron KCNQ - chr2R_8_10180001 chr2R_10180001 RAL-383 858 chr2R 10176879 10176911 chr2R 10186046 10186098 roo 10 9185 3.5 4.0 3.8 2.1 9219 chr2R 10176879 intron KCNQ - chr2R 10181488 intron KCNQ - chr2R 10186098 intron KCNQ - chr2R_10_10180001 chr2R_10180001 RAL-383 859 chr2R 10189183 10189224 chr2R 10189281 10189322 10 96 5.0 2.0 3.5 2.2 139 chr2R 10189183 intron KCNQ - chr2R 10189252 intron KCNQ - chr2R 10189322 intron KCNQ - chr2R_10_10185001 chr2R_10185001 RAL-383 860 chr2R 10257153 10257188 chr2R 10257264 10257299 9 111 4.5 2.0 3.2 2.1 146 chr2R 10257153 intron CG12911 + chr2R 10257226 intron CG12911 + chr2R 10257299 intron CG12911 + chr2R_9_10255001 chr2R_10255001 RAL-383 861 chr2R 10313288 10313336 chr2R 10313402 10313450 22 113 3.0 6.0 4.5 4.0 162 chr2R 10313288 intergenic not near genes chr2R 10313369 intergenic not near genes chr2R 10313450 intergenic Ndg + chr2R_22_10310001 chr2R_10310001 RAL-383 862 chr2R 10318499 10318528 chr2R 10318604 10318634 9 106 8.5 5.5 7.0 1.1 135 chr2R 10318499 intron Ndg + chr2R 10318566 intron Ndg + chr2R 10318634 intron Ndg + chr2R_9_10315001 chr2R_10315001 RAL-383 863 chr2R 10318530 10318538 chr2R 10318601 10318644 5 98 6.0 5.0 5.5 0.8 114 chr2R 10318530 intron Ndg + chr2R 10318587 intron Ndg + chr2R 10318644 intron Ndg + chr2R_5_10315001 chr2R_10315001 RAL-383 864 chr2R 10322057 10322071 chr2R 10322158 10322173 4 102 3.5 4.5 4.0 0.8 116 chr2R 10322057 3` UTR Ndg + chr2R 10322115 intergenic Ndg + chr2R 10322173 intergenic Ndg + chr2R_4_10320001 chr2R_10320001 RAL-383 865 chr2R 10352658 10352705 chr2R 10352755 10352796 20 94 3.0 4.5 3.8 4.2 138 chr2R 10352658 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352727 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352796 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_20_10350001 chr2R_10350001 RAL-383 866 chr2R 10370489 10370522 chr2R 10370652 10370685 9 160 4.0 0.0 2.0 3.0 196 chr2R 10370489 intron CG42732 - chr2R 10370587 intron CG42732 - chr2R 10370685 intron CG42732 - chr2R_9_10370001 chr2R_10370001 RAL-383 867 chr2R 10409044 10409085 chr2R 10409141 10409181 14 96 0.5 5.0 2.8 3.7 137 chr2R 10409044 intron CG42732 - chr2R 10409112 intron CG42732 - chr2R 10409181 intron,exon CG42732 -,CG33477 - chr2R_14_10405001 chr2R_10405001 RAL-383 868 chr2R 10429000 10429045 chr2R 10429097 10429142 16 94 4.5 2.5 3.5 3.6 142 chr2R 10429000 intergenic not near genes chr2R 10429071 intergenic not near genes chr2R 10429142 intergenic not near genes chr2R_16_10425001 chr2R_10425001 RAL-383 869 chr2R 10454083 10454127 chr2R 10454174 10454223 14 94 3.5 4.5 4.0 2.8 140 chr2R 10454083 intron,intron Galphao +,Cyp49a1 - chr2R 10454153 intron,intron Galphao +,Cyp49a1 - chr2R 10454223 intron,intron Galphao +,Cyp49a1 - chr2R_14_10450001 chr2R_10450001 RAL-383 870 chr2R 10518608 10518644 chr2R 10518728 10518744 10 117 2.0 4.0 3.0 2.5 136 chr2R 10518608 intron lola - chr2R 10518676 intron lola - chr2R 10518744 intron lola - chr2R_10_10515001 chr2R_10515001 RAL-383 871 chr2R 10563534 10563578 chr2R 10563634 10563678 4 95 4.5 6.0 5.2 0.6 144 chr2R 10563534 intron psq + chr2R 10563606 intron psq + chr2R 10563678 intron psq + chr2R_4_10560001 chr2R_10560001 RAL-383 872 chr2R 10563906 10563922 chr2R 10564117 10564133 7 211 0.0 3.0 1.5 2.8 227 chr2R 10563906 intron psq + chr2R 10564020 intron psq + chr2R 10564133 intron psq + chr2R_7_10560001 chr2R_10560001 RAL-383 873 chr2R 10585582 10585591 chr2R 10594163 10594183 Tirant 4 8590 5.0 6.0 5.5 0.6 8601 chr2R 10585582 intron psq + chr2R 10589882 intron psq + chr2R 10594183 intron psq + chr2R_4_10585001 chr2R_10585001 RAL-383 874 chr2R 10644046 10644087 chr2R 10644144 10644185 19 98 5.5 0.0 2.8 5.0 139 chr2R 10644046 intron Git - chr2R 10644116 intron Git - chr2R 10644185 intron Git - chr2R_19_10640001 chr2R_10640001 RAL-383 875 chr2R 10669806 10669855 chr2R 10669911 10669964 11 107 0.0 0.0 0.0 11.0 158 chr2R 10669806 intergenic not near genes chr2R 10669885 intergenic not near genes chr2R 10669964 intergenic not near genes chr2R_11_10665001 chr2R_10665001 RAL-383 876 chr2R 10672719 10672828 chr2R 10672826 10672973 7 122 0.0 0.0 0.0 7.0 254 chr2R 10672719 intergenic not near genes chr2R 10672846 intergenic stan + chr2R 10672973 intergenic stan + chr2R_7_10670001 chr2R_10670001 RAL-383 877 chr2R 10675362 10675379 chr2R 10675463 10675480 7 101 0.5 2.5 1.5 2.8 118 chr2R 10675362 intron stan + chr2R 10675421 intron stan + chr2R 10675480 intron stan + chr2R_7_10675001 chr2R_10675001 RAL-383 878 chr2R 10761536 10761587 chr2R 10761710 10761761 6 174 3.0 4.0 3.5 1.3 225 chr2R 10761536 intron,5` UTR CG33144 -,CR43605 + chr2R 10761648 intron,5` UTR CG33144 -,CR43605 + chr2R 10761761 intron CG33144 - chr2R_6_10760001 chr2R_10760001 RAL-383 879 chr2R 10770980 10771027 chr2R 10771077 10771128 17 98 2.0 5.0 3.5 3.8 148 chr2R 10770980 intron CG33144 - chr2R 10771054 intron CG33144 - chr2R 10771128 intron CG33144 - chr2R_17_10770001 chr2R_10770001 RAL-383 880 chr2R 10827323 10827362 chr2R 10827423 10827470 7 106 5.5 8.0 6.8 0.9 147 chr2R 10827323 exon CG12325 + chr2R 10827396 3` UTR CG12325 + chr2R 10827470 3` UTR,3` UTR CG12325 +,CG12344 - chr2R_7_10825001 chr2R_10825001 RAL-383 881 chr2R 10848304 10848313 chr2R 10848425 10848434 7 121 4.5 3.0 3.8 1.5 130 chr2R 10848304 intron CG30015 - chr2R 10848369 intron CG30015 - chr2R 10848434 intron CG30015 - chr2R_7_10845001 chr2R_10845001 RAL-383 882 chr2R 10851163 10851214 chr2R 10851268 10851319 14 104 3.5 2.5 3.0 3.5 156 chr2R 10851163 intron CG30015 - chr2R 10851241 intron CG30015 - chr2R 10851319 intron CG30015 - chr2R_14_10850001 chr2R_10850001 RAL-383 883 chr2R 10937794 10937824 chr2R 10937952 10937982 8 158 0.0 4.5 2.2 2.5 188 chr2R 10937794 intergenic not near genes chr2R 10937888 intergenic not near genes chr2R 10937982 intergenic Spn47C - chr2R_8_10935001 chr2R_10935001 RAL-383 884 chr2R 10948020 10948062 chr2R 10955584 10955633 17.6 6 7568 1.0 2.5 1.8 2.1 7613 chr2R 10948020 intergenic not near genes chr2R 10951826 intergenic not near genes chr2R 10955633 intergenic not near genes chr2R_6_10950001 chr2R_10950001 RAL-383 885 chr2R 10959076 10959113 chr2R 10959170 10959208 11 98 2.0 1.0 1.5 4.4 132 chr2R 10959076 intergenic not near genes chr2R 10959142 intergenic not near genes chr2R 10959208 intergenic not near genes chr2R_11_10955001 chr2R_10955001 RAL-383 886 chr2R 10979649 10979673 chr2R 10980139 10980163 297 9 488 2.5 6.5 4.5 1.6 514 chr2R 10979649 intergenic not near genes chr2R 10979906 intergenic not near genes chr2R 10980163 intergenic not near genes chr2R_9_10975001 chr2R_10975001 RAL-383 887 chr2R 10992941 10992980 chr2R 10993046 10993079 9 101 5.5 6.0 5.8 1.3 138 chr2R 10992941 intron luna - chr2R 10993010 intron luna - chr2R 10993079 intron luna - chr2R_9_10990001 chr2R_10990001 RAL-383 888 chr2R 11009798 11009847 chr2R 11018992 11019041 roo 9 9187 4.0 4.0 4.0 1.8 9243 chr2R 11009798 intron luna - chr2R 11014420 intron luna - chr2R 11019041 intron luna - chr2R_9_11010001 chr2R_11010001 RAL-383 889 chr2R 11097339 11097385 chr2R 11097464 11097510 15 122 4.0 4.0 4.0 3.0 171 chr2R 11097339 intron luna - chr2R 11097424 intron luna - chr2R 11097510 intron luna - chr2R_15_11095001 chr2R_11095001 RAL-383 890 chr2R 11150542 11150821 chr2R 11150650 11150917 17 103 1.5 1.5 1.5 6.8 375 chr2R 11150542 intron CG13229 - chr2R 11150730 intron CG13229 - chr2R 11150917 intron CG13229 - chr2R_17_11150001 chr2R_11150001 RAL-383 891 chr2R 11171517 11171558 chr2R 11171694 11171714 10 175 5.0 5.5 5.2 1.6 197 chr2R 11171517 intron,intron CG13229 -,shn + chr2R 11171616 intron,intron CG13229 -,shn + chr2R 11171714 intron,intron CG13229 -,shn + chr2R_10_11170001 chr2R_11170001 RAL-383 892 chr2R 11179249 11179289 chr2R 11179355 11179363 14 102 0.0 3.5 1.8 5.0 114 chr2R 11179249 intron shn + chr2R 11179306 intron shn + chr2R 11179363 intron shn + chr2R_14_11175001 chr2R_11175001 RAL-383 893 chr2R 11207799 11207838 chr2R 11208011 11208050 BS 15 210 7.5 6.0 6.8 1.9 251 chr2R 11207799 intron shn + chr2R 11207924 intron shn + chr2R 11208050 intron shn + chr2R_15_11205001 chr2R_11205001 RAL-383 894 chr2R 11249152 11249198 chr2R 11249297 11249344 16 144 3.5 4.5 4.0 3.2 192 chr2R 11249152 intergenic CG43112 + chr2R 11249248 intergenic CG43112 + chr2R 11249344 intergenic CG43112 + chr2R_16_11245001 chr2R_11245001 RAL-383 895 chr2R 11265719 11265765 chr2R 11265816 11265862 9 94 2.5 0.0 1.2 4.1 143 chr2R 11265719 exon Cpr47Ee + chr2R 11265790 intron Cpr47Ee + chr2R 11265862 intron Cpr47Ee + chr2R_9_11265001 chr2R_11265001 RAL-383 896 chr2R 11297609 11297650 chr2R 11301950 11301975 flea 14 4339 9.0 7.5 8.2 1.5 4366 chr2R 11297609 intergenic CG42336 - chr2R 11299792 intergenic not near genes chr2R 11301975 5` UTR CG7741 + chr2R_14_11295001 chr2R_11295001 RAL-383 897 chr2R 11415500 11415541 chr2R 11418669 11418699 opus 14 3167 5.0 7.0 6.0 2.0 3199 chr2R 11415500 intron Drip - chr2R 11417100 intron Drip - chr2R 11418699 intron Drip - chr2R_14_11415001 chr2R_11415001 RAL-383 898 chr2R 11426104 11426117 chr2R 11426456 11426470 7 352 29.0 36.5 32.8 0.2 366 chr2R 11426104 intron Drip - chr2R 11426287 intron Drip - chr2R 11426470 intron Drip - chr2R_7_11425001 chr2R_11425001 RAL-383 899 chr2R 11426101 11426151 chr2R 11426471 11426503 10 354 37.5 34.5 36.0 0.3 402 chr2R 11426101 intron Drip - chr2R 11426302 intron Drip - chr2R 11426503 intron Drip - chr2R_10_11425001 chr2R_11425001 RAL-383 900 chr2R 11472631 11472679 chr2R 11473844 11473896 pogo 13 1214 3.5 7.0 5.2 2.1 1265 chr2R 11472631 intergenic not near genes chr2R 11473264 intergenic not near genes chr2R 11473896 intergenic not near genes chr2R_13_11470001 chr2R_11470001 RAL-383 901 chr2R 11516782 11516826 chr2R 11516884 11516929 11 101 2.0 5.0 3.5 2.4 147 chr2R 11516782 intergenic not near genes chr2R 11516856 intergenic not near genes chr2R 11516929 intergenic not near genes chr2R_11_11515001 chr2R_11515001 RAL-383 902 chr2R 11535119 11535157 chr2R 11535215 11535250 12 90 1.5 3.5 2.5 3.4 131 chr2R 11535119 intergenic not near genes chr2R 11535184 intergenic not near genes chr2R 11535250 intergenic not near genes chr2R_12_11535001 chr2R_11535001 RAL-383 903 chr2R 11537195 11537248 chr2R 11537292 11537339 17 95 4.0 4.0 4.0 3.4 144 chr2R 11537195 intergenic not near genes chr2R 11537267 intergenic not near genes chr2R 11537339 intergenic not near genes chr2R_17_11535001 chr2R_11535001 RAL-383 904 chr2R 11547143 11547155 chr2R 11547774 11547788 4 636 4.0 4.5 4.2 0.8 645 chr2R 11547143 intergenic not near genes chr2R 11547466 intergenic not near genes chr2R 11547788 intergenic not near genes chr2R_4_11545001 chr2R_11545001 RAL-383 905 chr2R 11555406 11555422 chr2R 11555760 11555777 7 355 1.0 5.0 3.0 1.8 371 chr2R 11555406 intergenic not near genes chr2R 11555592 intergenic not near genes chr2R 11555777 intergenic not near genes chr2R_7_11555001 chr2R_11555001 RAL-383 906 chr2R 11614610 11614798 chr2R 11614717 11614895 16 107 5.0 5.0 5.0 2.7 285 chr2R 11614610 intron tou - chr2R 11614752 intron tou - chr2R 11614895 intron tou - chr2R_16_11610001 chr2R_11610001 RAL-383 907 chr2R 11636415 11636442 chr2R 11636500 11636532 8 84 2.5 4.5 3.5 1.8 117 chr2R 11636415 intron CG9005 - chr2R 11636474 intron CG9005 - chr2R 11636532 intron CG9005 - chr2R_8_11635001 chr2R_11635001 RAL-383 908 chr2R 11665799 11665843 chr2R 11665897 11665950 9 102 1.5 1.5 1.5 3.6 151 chr2R 11665799 intron,5` UTR Roc2 -,Tret1-1 + chr2R 11665874 intron,intron Roc2 -,Tret1-1 + chr2R 11665950 intron,intron Roc2 -,Tret1-1 + chr2R_9_11665001 chr2R_11665001 RAL-383 909 chr2R 11822961 11823006 chr2R 11823058 11823103 10 94 1.0 4.5 2.8 2.6 142 chr2R 11822961 intergenic not near genes chr2R 11823032 intergenic not near genes chr2R 11823103 intergenic not near genes chr2R_10_11820001 chr2R_11820001 RAL-383 910 chr2R 11922731 11922772 chr2R 11922830 11922866 8 98 2.0 5.0 3.5 1.8 135 chr2R 11922731 intergenic not near genes chr2R 11922798 intergenic not near genes chr2R 11922866 intergenic not near genes chr2R_8_11920001 chr2R_11920001 RAL-383 911 chr2R 11928671 11928707 chr2R 11928769 11928805 4 98 0.0 1.5 0.8 2.2 134 chr2R 11928671 intergenic not near genes chr2R 11928738 intergenic not near genes chr2R 11928805 intergenic CR44312 - chr2R_4_11925001 chr2R_11925001 RAL-383 912 chr2R 11932296 11932328 chr2R 11932412 11932444 7 116 4.5 4.5 4.5 1.3 148 chr2R 11932296 intergenic not near genes chr2R 11932370 intergenic not near genes chr2R 11932444 intergenic not near genes chr2R_7_11930001 chr2R_11930001 RAL-383 913 chr2R 12185980 12186036 chr2R 12186095 12186131 25 109 5.0 7.0 6.0 3.6 151 chr2R 12185980 intron Cyp6g1 + chr2R 12186056 intron Cyp6g1 + chr2R 12186131 intron Cyp6g1 + chr2R_25_12185001 chr2R_12185001 RAL-383 914 chr2R 12185227 12185237 chr2R 12188133 12188142 4 2905 28.5 117.0 72.8 0.1 2915 chr2R 12185227 3` UTR,exon CG13175 +,CG33964 + chr2R 12186684 exon Cyp6g1 + chr2R 12188142 3` UTR Cyp6g1 + chr2R_4_12185001 chr2R_12185001 RAL-383 915 chr2R 12187476 12187495 chr2R 12190072 12190091 5 2600 55.0 47.0 51.0 0.1 2615 chr2R 12187476 exon Cyp6g1 + chr2R 12188784 exon Cyp6g2 - chr2R 12190091 exon Cyp6g2 - chr2R_5_12185001 chr2R_12185001 RAL-383 916 chr2R 12187474 12187508 chr2R 12190098 12190124 16 2615 65.5 39.5 52.5 0.3 2650 chr2R 12187474 exon Cyp6g1 + chr2R 12188799 exon Cyp6g2 - chr2R 12190124 exon Cyp6g2 - chr2R_16_12185001 chr2R_12185001 RAL-383 917 chr2R 12217557 12217601 chr2R 12217657 12217702 9 98 1.0 2.0 1.5 3.6 145 chr2R 12217557 intergenic not near genes chr2R 12217630 intergenic not near genes chr2R 12217702 intergenic not near genes chr2R_9_12215001 chr2R_12215001 RAL-383 918 chr2R 12334873 12334883 chr2R 12334971 12334981 4 98 5.5 4.0 4.8 0.7 108 chr2R 12334873 intergenic CG8490 + chr2R 12334927 intergenic CG8490 + chr2R 12334981 intergenic CG8490 + chr2R_4_12330001 chr2R_12330001 RAL-383 919 chr2R 12362884 12362902 chr2R 12362993 12363011 6 109 12.0 10.0 11.0 0.5 127 chr2R 12362884 3` UTR CG30043 + chr2R 12362948 3` UTR CG30043 + chr2R 12363011 3` UTR CG30043 + chr2R_6_12360001 chr2R_12360001 RAL-383 920 chr2R 12565546 12565593 chr2R 12565944 12565962 9 381 0.0 4.0 2.0 3.0 416 chr2R 12565546 intergenic not near genes chr2R 12565754 intergenic Cyp301a1 + chr2R 12565962 intergenic Cyp301a1 + chr2R_9_12565001 chr2R_12565001 RAL-383 921 chr2R 12625509 12625529 chr2R 12625607 12625627 4 98 1.5 1.0 1.2 1.8 118 chr2R 12625509 intergenic CG30054 +,CG17760 + chr2R 12625568 intergenic CG30054 +,CG17760 + chr2R 12625627 intergenic CG17760 +,CG30054 + chr2R_4_12625001 chr2R_12625001 RAL-383 922 chr2R 12707498 12707549 chr2R 12715884 12715935 roo 14 8386 1.0 1.0 1.0 7.0 8437 chr2R 12707498 intron CG42663 + chr2R 12711716 intron CG42663 + chr2R 12715935 intron CG42663 + chr2R_14_12710001 chr2R_12710001 RAL-383 923 chr2R 12728856 12728904 chr2R 12728979 12729022 7 119 3.5 3.5 3.5 1.6 166 chr2R 12728856 intron CG42663 + chr2R 12728939 intron CG42663 + chr2R 12729022 intron CG42663 + chr2R_7_12725001 chr2R_12725001 RAL-383 924 chr2R 12789293 12789320 chr2R 12797676 12797692 roo 4 8380 3.0 3.5 3.2 1.0 8399 chr2R 12789293 intron,3` UTR sca +,CR45137 - chr2R 12793492 intron,intron sca +,CR45137 - chr2R 12797692 intron,3` UTR sca +,CR45137 - chr2R_4_12790001 chr2R_12790001 RAL-383 925 chr2R 12819438 12819478 chr2R 12824527 12824567 jockey 9 5088 2.0 4.0 3.0 2.2 5129 chr2R 12819438 intergenic not near genes chr2R 12822002 intergenic not near genes chr2R 12824567 intergenic not near genes chr2R_9_12820001 chr2R_12820001 RAL-383 926 chr2R 12836389 12836409 chr2R 12836476 12836511 5 102 3.0 4.0 3.5 1.1 122 chr2R 12836389 intergenic not near genes chr2R 12836450 intergenic not near genes chr2R 12836511 intergenic not near genes chr2R_5_12835001 chr2R_12835001 RAL-383 927 chr2R 13043032 13043060 chr2R 13043132 13043159 7 100 0.0 1.5 0.8 3.9 127 chr2R 13043032 intergenic not near genes chr2R 13043096 intergenic not near genes chr2R 13043159 intergenic not near genes chr2R_7_13040001 chr2R_13040001 RAL-383 928 chr2R 13078740 13078778 chr2R 13078857 13078895 6 112 7.0 2.5 4.8 1.0 155 chr2R 13078740 intron Drl-2 - chr2R 13078818 intron Drl-2 - chr2R 13078895 intron Drl-2 - chr2R_6_13075001 chr2R_13075001 RAL-383 929 chr2R 13123149 13123162 chr2R 13123514 13123527 4 364 10.5 7.0 8.8 0.4 378 chr2R 13123149 5` UTR CG13325 + chr2R 13123338 exon CG13325 + chr2R 13123527 exon CG13325 + chr2R_4_13120001 chr2R_13120001 RAL-383 930 chr2R 13123167 13123187 chr2R 13123502 13123552 6 355 6.5 3.5 5.0 1.0 385 chr2R 13123167 exon CG13325 + chr2R 13123360 exon CG13325 + chr2R 13123552 exon CG13325 + chr2R_6_13120001 chr2R_13120001 RAL-383 931 chr2R 13136842 13136858 chr2R 13141635 13141675 Doc 5 4810 6.5 4.5 5.5 0.8 4833 chr2R 13136842 exon Cap-G + chr2R 13139258 intron Cap-G + chr2R 13141675 intron Cap-G + chr2R_5_13135001 chr2R_13135001 RAL-383 932 chr2R 13167424 13167446 chr2R 13167521 13167560 5 111 9.0 0.5 4.8 0.9 136 chr2R 13167424 intron GLaz - chr2R 13167492 intron GLaz - chr2R 13167560 intron GLaz - chr2R_5_13165001 chr2R_13165001 RAL-383 933 chr2R 13218286 13218304 chr2R 13218389 13218397 5 101 8.0 0.0 4.0 1.0 111 chr2R 13218286 intron CG4630 - chr2R 13218342 intron CG4630 - chr2R 13218397 intron CG4630 - chr2R_5_13215001 chr2R_13215001 RAL-383 934 chr2R 13334250 13334301 chr2R 13334356 13334407 10 106 3.0 2.5 2.8 2.6 157 chr2R 13334250 intron CR44206 - chr2R 13334328 intron CR44206 - chr2R 13334407 intron CR44206 - chr2R_10_13330001 chr2R_13330001 RAL-383 935 chr2R 13364688 13364725 chr2R 13364793 13364831 9 105 1.5 2.5 2.0 3.0 143 chr2R 13364688 intergenic not near genes chr2R 13364760 intergenic not near genes chr2R 13364831 intergenic not near genes chr2R_9_13360001 chr2R_13360001 RAL-383 936 chr2R 13432915 13432968 chr2R 13433011 13433064 19 94 3.0 2.0 2.5 5.4 149 chr2R 13432915 intron CG42321 - chr2R 13432990 intron CG42321 - chr2R 13433064 intron,5` UTR CG42321 -,CG30065 + chr2R_19_13430001 chr2R_13430001 RAL-383 937 chr2R 13439117 13439227 chr2R 13439275 13439323 8 150 1.0 3.0 2.0 2.7 206 chr2R 13439117 intergenic CG42321 -,cnn - chr2R 13439220 intergenic cnn -,CG42321 - chr2R 13439323 3` UTR cnn - chr2R_8_13435001 chr2R_13435001 RAL-383 938 chr2R 13544547 13544586 chr2R 13544643 13544676 9 92 0.0 7.5 3.8 1.9 129 chr2R 13544547 intron CG6145 - chr2R 13544612 intron CG6145 - chr2R 13544676 intron CG6145 - chr2R_9_13540001 chr2R_13540001 RAL-383 939 chr2R 13547069 13547105 chr2R 13547284 13547320 8 214 4.5 5.5 5.0 1.3 251 chr2R 13547069 intron CG6145 - chr2R 13547194 intron CG6145 - chr2R 13547320 intron CG6145 - chr2R_8_13545001 chr2R_13545001 RAL-383 940 chr2R 13580483 13580522 chr2R 13580853 13580891 jockey 8 366 6.5 5.5 6.0 1.1 408 chr2R 13580483 3` UTR CG6191 - chr2R 13580687 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580891 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_8_13580001 chr2R_13580001 RAL-383 941 chr2R 13629375 13629397 chr2R 13629479 13629501 10 104 6.5 4.5 5.5 1.5 126 chr2R 13629375 intron fas + chr2R 13629438 intron fas + chr2R 13629501 intron fas + chr2R_10_13625001 chr2R_13625001 RAL-383 942 chr2R 13629400 13629425 chr2R 13629476 13629529 8 100 2.0 4.0 3.0 2.0 129 chr2R 13629400 intron fas + chr2R 13629464 intron fas + chr2R 13629529 intron fas + chr2R_8_13625001 chr2R_13625001 RAL-383 943 chr2R 13632297 13632318 chr2R 13632405 13632408 6 104 7.0 9.5 8.2 0.7 111 chr2R 13632297 intron fas + chr2R 13632352 intron fas + chr2R 13632408 intron fas + chr2R_6_13630001 chr2R_13630001 RAL-383 944 chr2R 13670297 13670342 chr2R 13670496 13670541 9 197 4.5 8.5 6.5 1.2 244 chr2R 13670297 intron,exon fas +,CG18368 + chr2R 13670419 intron,exon fas +,CG18368 + chr2R 13670541 intron,exon fas +,CG18368 + chr2R_9_13670001 chr2R_13670001 RAL-383 945 chr2R 13684244 13684267 chr2R 13684342 13684365 10 98 3.5 2.0 2.8 2.6 121 chr2R 13684244 intron fas + chr2R 13684304 intron fas + chr2R 13684365 intron fas + chr2R_10_13680001 chr2R_13680001 RAL-383 946 chr2R 13728111 13728141 chr2R 13735791 13735821 opus 5 7680 2.0 9.5 5.8 0.7 7710 chr2R 13728111 intron fas + chr2R 13731966 intron fas + chr2R 13735821 intron fas + chr2R_5_13730001 chr2R_13730001 RAL-383 947 chr2R 13768963 13769004 chr2R 13769082 13769123 8 114 3.0 3.0 3.0 2.0 160 chr2R 13768963 intergenic not near genes chr2R 13769043 intergenic not near genes chr2R 13769123 intergenic not near genes chr2R_8_13765001 chr2R_13765001 RAL-383 948 chr2R 13793132 13793161 chr2R 13793228 13793257 4 94 2.5 3.0 2.8 1.1 125 chr2R 13793132 intergenic not near genes chr2R 13793194 intergenic not near genes chr2R 13793257 intergenic not near genes chr2R_4_13790001 chr2R_13790001 RAL-383 949 chr2R 13817640 13817689 chr2R 13817739 13817791 8 100 2.0 0.0 1.0 4.0 151 chr2R 13817640 intron stj + chr2R 13817716 intron stj + chr2R 13817791 intron stj + chr2R_8_13815001 chr2R_13815001 RAL-383 950 chr2R 13822730 13822772 chr2R 13822826 13822849 7 86 3.0 4.0 3.5 1.6 119 chr2R 13822730 intron fl(2)d - chr2R 13822790 intron fl(2)d - chr2R 13822849 intron fl(2)d - chr2R_7_13820001 chr2R_13820001 RAL-383 951 chr2R 13827541 13827571 chr2R 13827725 13827754 4 186 1.0 2.0 1.5 1.6 213 chr2R 13827541 intron CG6329 + chr2R 13827648 intron CG6329 + chr2R 13827754 intron CG6329 + chr2R_4_13825001 chr2R_13825001 RAL-383 952 chr2R 13905584 13905619 chr2R 13907579 13907602 Rt1a 4 1995 0.5 1.5 1.0 2.0 2018 chr2R 13905584 intron shot - chr2R 13906593 intron shot - chr2R 13907602 intron shot - chr2R_4_13905001 chr2R_13905001 RAL-383 953 chr2R 13925849 13925891 chr2R 13926023 13926065 20 174 6.5 8.5 7.5 2.4 216 chr2R 13925849 intron shot - chr2R 13925957 intron shot - chr2R 13926065 intron shot - chr2R_20_13925001 chr2R_13925001 RAL-383 954 chr2R 14235442 14235488 chr2R 14235543 14235562 9 97 3.0 3.0 3.0 2.2 120 chr2R 14235442 5` UTR Opa1 - chr2R 14235502 intergenic Opa1 -,CG8485 - chr2R 14235562 intergenic Opa1 -,CG8485 - chr2R_9_14235001 chr2R_14235001 RAL-383 955 chr2R 14241542 14241579 chr2R 14244692 14244729 6 3150 22.0 28.5 25.2 0.2 3187 chr2R 14241542 exon CG8494 + chr2R 14243136 exon CG8494 + chr2R 14244729 intron CG8503 + chr2R_6_14240001 chr2R_14240001 RAL-383 956 chr2R 14277559 14277607 chr2R 14277660 14277709 11 100 4.5 3.5 4.0 2.2 150 chr2R 14277559 5` UTR Ih + chr2R 14277634 5` UTR Ih + chr2R 14277709 5` UTR Ih + chr2R_11_14275001 chr2R_14275001 RAL-383 957 chr2R 14285033 14285045 chr2R 14285139 14285162 6 115 6.0 4.0 5.0 1.0 129 chr2R 14285033 intron Ih + chr2R 14285098 intron Ih + chr2R 14285162 intron Ih + chr2R_6_14285001 chr2R_14285001 RAL-383 958 chr2R 14357543 14357575 chr2R 14357651 14357685 6 108 3.5 3.0 3.2 1.4 142 chr2R 14357543 intergenic CG8617 -,Arc1 - chr2R 14357614 intergenic Arc1 -,CG8617 - chr2R 14357685 intergenic Arc1 -,CG8617 - chr2R_6_14355001 chr2R_14355001 RAL-383 959 chr2R 14434560 14434568 chr2R 14434687 14434695 7 127 0.0 0.0 0.0 7.0 135 chr2R 14434560 intergenic not near genes chr2R 14434628 intergenic not near genes chr2R 14434695 intergenic not near genes chr2R_7_14430001 chr2R_14430001 RAL-383 960 chr2R 14467286 14467319 chr2R 14476464 14476496 roo 13 9178 3.5 2.0 2.8 3.4 9210 chr2R 14467286 intergenic not near genes chr2R 14471891 intergenic not near genes chr2R 14476496 5` UTR CR44462 + chr2R_13_14470001 chr2R_14470001 RAL-383 961 chr2R 14497400 14497416 chr2R 14498597 14498613 1360 4 1197 2.0 4.5 3.2 1.0 1213 chr2R 14497400 3` UTR Cpsf160 - chr2R 14498006 intron Cpsf160 - chr2R 14498613 3` UTR Cpsf160 - chr2R_4_14495001 chr2R_14495001 RAL-383 962 chr2R 14530348 14530372 chr2R 14530457 14530481 4 109 4.5 3.0 3.8 0.8 133 chr2R 14530348 intron ttv + chr2R 14530414 intron ttv + chr2R 14530481 intron ttv + chr2R_4_14530001 chr2R_14530001 RAL-383 963 chr2R 14565540 14565549 chr2R 14565637 14565646 6 97 11.5 2.0 6.8 0.8 106 chr2R 14565540 intron ttv + chr2R 14565593 intron ttv + chr2R 14565646 intron ttv + chr2R_6_14565001 chr2R_14565001 RAL-383 964 chr2R 14565550 14565565 chr2R 14565635 14565636 4 85 10.5 2.5 6.5 0.5 86 chr2R 14565550 intron ttv + chr2R 14565593 intron ttv + chr2R 14565636 intron ttv + chr2R_4_14565001 chr2R_14565001 RAL-383 965 chr2R 14593700 14593731 chr2R 14596194 14596225 6 2496 13.0 19.5 16.2 0.3 2525 chr2R 14593700 exon CG12869 + chr2R 14594962 exon CG12869 + chr2R 14596225 exon RpI1 - chr2R_6_14590001 chr2R_14590001 RAL-383 966 chr2R 14850044 14850088 chr2R 14850170 14850214 7 120 21.5 26.0 23.8 0.3 170 chr2R 14850044 exon SMC2 - chr2R 14850129 intron SMC2 - chr2R 14850214 exon SMC2 - chr2R_7_14850001 chr2R_14850001 RAL-383 967 chr2R 14889197 14889223 chr2R 14897825 14897838 Max-element 6 8624 7.0 0.0 3.5 1.3 8641 chr2R 14889197 intergenic Cyp6a8 - chr2R 14893518 intergenic not near genes chr2R 14897838 intergenic not near genes chr2R_6_14890001 chr2R_14890001 RAL-383 968 chr2R 14911682 14911723 chr2R 14911825 14911866 9 143 4.5 4.0 4.2 1.7 184 chr2R 14911682 intron CG10249 - chr2R 14911774 intron CG10249 - chr2R 14911866 intron CG10249 - chr2R_9_14910001 chr2R_14910001 RAL-383 969 chr2R 14915788 14915829 chr2R 14915886 14915926 6 97 2.5 2.5 2.5 1.7 138 chr2R 14915788 intron CG10249 - chr2R 14915857 intron CG10249 - chr2R 14915926 intron CG10249 - chr2R_6_14915001 chr2R_14915001 RAL-383 970 chr2R 14916536 14916558 chr2R 14916636 14916658 12 100 4.0 4.0 4.0 2.4 122 chr2R 14916536 intron CG10249 - chr2R 14916597 intron CG10249 - chr2R 14916658 intron CG10249 - chr2R_12_14915001 chr2R_14915001 RAL-383 971 chr2R 14917220 14917271 chr2R 14917330 14917381 10 105 1.5 1.0 1.2 4.5 161 chr2R 14917220 intron CG10249 - chr2R 14917300 intron CG10249 - chr2R 14917381 intron CG10249 - chr2R_10_14915001 chr2R_14915001 RAL-383 972 chr2R 14919034 14919178 chr2R 14919133 14919307 18 108 0.0 0.0 0.0 18.0 273 chr2R 14919034 intron CG10249 - chr2R 14919170 intron CG10249 - chr2R 14919307 intron CG10249 - chr2R_18_14915001 chr2R_14915001 RAL-383 973 chr2R 14922129 14922174 chr2R 14922225 14922270 13 96 3.0 4.5 3.8 2.7 141 chr2R 14922129 intron CG10249 - chr2R 14922200 intron CG10249 - chr2R 14922270 intron CG10249 - chr2R_13_14920001 chr2R_14920001 RAL-383 974 chr2R 14934435 14934447 chr2R 14934543 14934555 4 108 5.0 0.0 2.5 1.1 120 chr2R 14934435 intron CG10253 - chr2R 14934495 intron CG10253 - chr2R 14934555 intron CG10253 - chr2R_4_14930001 chr2R_14930001 RAL-383 975 chr2R 15004707 15004760 chr2R 15005056 15005113 jockey 19 350 3.5 3.0 3.2 4.5 406 chr2R 15004707 intergenic not near genes chr2R 15004910 intergenic not near genes chr2R 15005113 intergenic not near genes chr2R_19_15000001 chr2R_15000001 RAL-383 976 chr2R 15015442 15015488 chr2R 15022886 15022928 mdg1 10 7441 2.0 2.5 2.2 3.1 7486 chr2R 15015442 intron hbs + chr2R 15019185 intron hbs + chr2R 15022928 intron hbs + chr2R_10_15015001 chr2R_15015001 RAL-383 977 chr2R 15084959 15085004 chr2R 15092028 15092073 297 10 7069 2.5 4.5 3.5 2.2 7114 chr2R 15084959 intergenic not near genes chr2R 15088516 intergenic not near genes chr2R 15092073 5` UTR CR44457 + chr2R_10_15085001 chr2R_15085001 RAL-383 978 chr2R 15119328 15119350 chr2R 15127799 15127829 Tirant 8 8487 5.0 3.5 4.2 1.5 8501 chr2R 15119328 intron chn + chr2R 15123578 intron chn + chr2R 15127829 intron chn + chr2R_8_15120001 chr2R_15120001 RAL-383 979 chr2R 15196075 15196124 chr2R 15196191 15196235 13 114 5.5 2.5 4.0 2.6 160 chr2R 15196075 intergenic not near genes chr2R 15196155 intergenic not near genes chr2R 15196235 intergenic not near genes chr2R_13_15195001 chr2R_15195001 RAL-383 980 chr2R 15201211 15201255 chr2R 15201322 15201366 11 110 5.5 5.5 5.5 1.7 155 chr2R 15201211 intergenic GPHR -,CG11807 + chr2R 15201288 5` UTR CG11807 + chr2R 15201366 5` UTR CG11807 + chr2R_11_15200001 chr2R_15200001 RAL-383 981 chr2R 15252101 15252151 chr2R 15252198 15252248 20 95 3.0 2.5 2.8 5.3 147 chr2R 15252101 intron scb + chr2R 15252174 intron scb + chr2R 15252248 intron scb + chr2R_20_15250001 chr2R_15250001 RAL-383 982 chr2R 15281879 15281916 chr2R 15282000 15282044 8 124 0.5 4.5 2.5 2.3 165 chr2R 15281879 intron Trpm - chr2R 15281962 intron Trpm - chr2R 15282044 intron Trpm - chr2R_8_15280001 chr2R_15280001 RAL-383 983 chr2R 15330187 15330238 chr2R 15330341 15330392 10 154 1.5 3.0 2.2 3.1 205 chr2R 15330187 intergenic CR44371 - chr2R 15330290 intergenic CR44371 - chr2R 15330392 intergenic CR44371 - chr2R_10_15330001 chr2R_15330001 RAL-383 984 chr2R 15374789 15375074 chr2R 15374892 15375188 7 115 2.0 1.5 1.8 2.5 399 chr2R 15374789 intergenic not near genes chr2R 15374988 intergenic not near genes chr2R 15375188 intergenic not near genes chr2R_7_15370001 chr2R_15370001 RAL-383 985 chr2R 15395838 15395888 chr2R 15395960 15396013 20 122 8.5 5.0 6.8 2.6 175 chr2R 15395838 intergenic not near genes chr2R 15395926 intergenic not near genes chr2R 15396013 intergenic not near genes chr2R_20_15395001 chr2R_15395001 RAL-383 986 chr2R 15547931 15547975 chr2R 15548141 15548142 13 205 3.0 1.0 2.0 4.3 211 chr2R 15547931 intron CG8192 - chr2R 15548036 intron CG8192 - chr2R 15548142 intron CG8192 - chr2R_13_15545001 chr2R_15545001 RAL-383 987 chr2R 15740078 15740121 chr2R 15745544 15745567 4 5454 27.0 24.5 25.8 0.1 5489 chr2R 15740078 intron CG30089 + chr2R 15742822 intron CG30089 + chr2R 15745567 intron CG30089 + chr2R_4_15740001 chr2R_15740001 RAL-383 988 chr2R 15745688 15745732 chr2R 15746065 15746109 6 376 1.0 1.5 1.2 2.7 421 chr2R 15745688 intron CG30089 + chr2R 15745898 intron CG30089 + chr2R 15746109 intron CG30089 + chr2R_6_15745001 chr2R_15745001 RAL-383 989 chr2R 15750733 15750737 chr2R 15750812 15750842 6 97 1.5 4.5 3.0 1.5 109 chr2R 15750733 intron CG30089 + chr2R 15750788 intron CG30089 + chr2R 15750842 intron CG30089 + chr2R_6_15750001 chr2R_15750001 RAL-383 990 chr2R 15783564 15783592 chr2R 15784228 15784256 5 664 1.5 1.5 1.5 2.0 692 chr2R 15783564 intron Zasp52 - chr2R 15783910 intron Zasp52 - chr2R 15784256 intron Zasp52 - chr2R_5_15780001 chr2R_15780001 RAL-383 991 chr2R 15810026 15810069 chr2R 15810320 15810363 7 293 5.5 4.0 4.8 1.2 337 chr2R 15810026 intron,intron Zasp52 -,tun + chr2R 15810194 intron,intron Zasp52 -,tun + chr2R 15810363 intron,intron Zasp52 -,tun + chr2R_7_15810001 chr2R_15810001 RAL-383 992 chr2R 15833509 15833544 chr2R 15833616 15833651 6 104 3.0 2.5 2.8 1.6 142 chr2R 15833509 intron,intron tun +,Poxn - chr2R 15833580 intron,intron tun +,Poxn - chr2R 15833651 intron,intron tun +,Poxn - chr2R_6_15830001 chr2R_15830001 RAL-383 993 chr2R 15891797 15891836 chr2R 15891893 15891932 7 96 2.5 4.0 3.2 1.7 135 chr2R 15891797 intron sli - chr2R 15891864 intron sli - chr2R 15891932 intron sli - chr2R_7_15890001 chr2R_15890001 RAL-383 994 chr2R 16225185 16225234 chr2R 16225313 16225333 6 121 1.0 3.5 2.2 1.9 148 chr2R 16225185 5` UTR CG15706 - chr2R 16225259 5` UTR CG15706 - chr2R 16225333 intron CG15706 - chr2R_6_16225001 chr2R_16225001 RAL-383 995 chr2R 16245613 16245662 chr2R 16245721 16245770 21 107 4.5 2.5 3.5 4.7 157 chr2R 16245613 intron CngA - chr2R 16245692 intron CngA - chr2R 16245770 intron CngA - chr2R_21_16245001 chr2R_16245001 RAL-383 996 chr2R 16352826 16352867 chr2R 16352926 16352970 12 103 6.0 0.0 3.0 3.0 144 chr2R 16352826 intergenic not near genes chr2R 16352898 intergenic not near genes chr2R 16352970 intergenic not near genes chr2R_12_16350001 chr2R_16350001 RAL-383 997 chr2R 16380107 16380119 chr2R 16380224 16380237 4 118 5.0 2.5 3.8 0.8 130 chr2R 16380107 5` UTR,3` UTR CR45316 +,CR45317 - chr2R 16380172 3` UTR CR45317 - chr2R 16380237 intergenic CR45317 -,CR45316 +,CG43187 + chr2R_4_16380001 chr2R_16380001 RAL-383 998 chr2R 16535062 16535107 chr2R 16535158 16535199 7 95 3.0 2.5 2.8 1.8 137 chr2R 16535062 5` UTR loopin-1 + chr2R 16535130 intron loopin-1 + chr2R 16535199 exon loopin-1 + chr2R_7_16535001 chr2R_16535001 RAL-383 999 chr2R 16544851 16544860 chr2R 16544946 16544965 5 103 0.0 0.0 0.0 5.0 114 chr2R 16544851 intergenic not near genes chr2R 16544908 intergenic not near genes chr2R 16544965 intergenic not near genes chr2R_5_16540001 chr2R_16540001 RAL-383 1000 chr2R 16617062 16617086 chr2R 16617145 16617173 6 94 2.5 8.5 5.5 0.9 111 chr2R 16617062 intron CG5065 + chr2R 16617118 intron CG5065 + chr2R 16617173 intron CG5065 + chr2R_6_16615001 chr2R_16615001 RAL-383 1001 chr2R 16618700 16618736 chr2R 16618796 16618832 7 95 0.0 5.0 2.5 2.0 132 chr2R 16618700 intron CG5065 + chr2R 16618766 intron CG5065 + chr2R 16618832 5` UTR CG5065 + chr2R_7_16615001 chr2R_16615001 RAL-383 1002 chr2R 16619958 16619990 chr2R 16620058 16620063 9 98 2.0 0.0 1.0 4.5 105 chr2R 16619958 intron CG5065 + chr2R 16620010 intron CG5065 + chr2R 16620063 intron CG5065 + chr2R_9_16620001 chr2R_16620001 RAL-383 1003 chr2R 16665104 16665143 chr2R 16665208 16665247 14 103 2.5 6.5 4.5 2.5 143 chr2R 16665104 intron Picot - chr2R 16665176 intron Picot - chr2R 16665247 intron Picot - chr2R_14_16665001 chr2R_16665001 RAL-383 1004 chr2R 16726682 16726690 chr2R 16726786 16726809 5 116 1.5 8.0 4.8 0.9 127 chr2R 16726682 intron CG30463 - chr2R 16726746 intron CG30463 - chr2R 16726809 intron CG30463 - chr2R_5_16725001 chr2R_16725001 RAL-383 1005 chr2R 16836592 16836599 chr2R 16839385 16839392 4 2793 39.0 22.0 30.5 0.1 2800 chr2R 16836592 5` UTR CR43650 + chr2R 16837992 5` UTR CR43650 + chr2R 16839392 5` UTR CR43650 + chr2R_4_16835001 chr2R_16835001 RAL-383 1006 chr2R 16911137 16911148 chr2R 16911228 16911244 5 94 0.0 2.0 1.0 2.5 107 chr2R 16911137 intergenic not near genes chr2R 16911190 intergenic not near genes chr2R 16911244 intergenic not near genes chr2R_5_16910001 chr2R_16910001 RAL-383 1007 chr2R 16930615 16930627 chr2R 16930713 16930725 5 98 0.0 5.5 2.8 1.3 110 chr2R 16930615 intron Pkc53E + chr2R 16930670 intron Pkc53E + chr2R 16930725 intron Pkc53E + chr2R_5_16930001 chr2R_16930001 RAL-383 1008 chr2R 16989108 16989147 chr2R 16989229 16989268 8 119 2.0 6.5 4.2 1.5 160 chr2R 16989108 intron Cbp53E + chr2R 16989188 intron Cbp53E + chr2R 16989268 intron Cbp53E + chr2R_8_16985001 chr2R_16985001 RAL-383 1009 chr2R 17048601 17048654 chr2R 17048700 17048753 14 99 5.5 4.0 4.8 2.4 152 chr2R 17048601 3` UTR CG9642 + chr2R 17048677 3` UTR CG9642 + chr2R 17048753 3` UTR CG9642 + chr2R_14_17045001 chr2R_17045001 RAL-383 1010 chr2R 17079047 17079083 chr2R 17079149 17079184 6 101 3.0 3.5 3.2 1.4 137 chr2R 17079047 intron CG30460 - chr2R 17079116 intron CG30460 - chr2R 17079184 intron CG30460 - chr2R_6_17075001 chr2R_17075001 RAL-383 1011 chr2R 17147224 17147263 chr2R 17152275 17152314 jockey 11 5051 3.5 2.5 3.0 2.8 5090 chr2R 17147224 intergenic not near genes chr2R 17149769 intergenic not near genes chr2R 17152314 intergenic not near genes chr2R_11_17145001 chr2R_17145001 RAL-383 1012 chr2R 17161344 17161346 chr2R 17161568 17161573 4 225 6.5 0.0 3.2 1.0 229 chr2R 17161344 intergenic not near genes chr2R 17161458 intergenic not near genes chr2R 17161573 intergenic not near genes chr2R_4_17160001 chr2R_17160001 RAL-383 1013 chr2R 17236506 17236534 chr2R 17241710 17241731 copia 8 5216 2.0 2.0 2.0 2.7 5225 chr2R 17236506 intron mbl + chr2R 17239118 intron mbl + chr2R 17241731 intron mbl + chr2R_8_17235001 chr2R_17235001 RAL-383 1014 chr2R 17241946 17241979 chr2R 17242074 17242099 5 119 5.0 6.0 5.5 0.8 153 chr2R 17241946 intron mbl + chr2R 17242022 intron mbl + chr2R 17242099 intron mbl + chr2R_5_17240001 chr2R_17240001 RAL-383 1015 chr2R 17381566 17381616 chr2R 17381674 17381715 15 105 3.5 2.0 2.8 3.9 149 chr2R 17381566 intergenic not near genes chr2R 17381640 intergenic not near genes chr2R 17381715 intergenic not near genes chr2R_15_17380001 chr2R_17380001 RAL-383 1016 chr2R 17395264 17395313 chr2R 17395361 17395401 16 96 6.0 7.0 6.5 2.1 137 chr2R 17395264 intron Sip1 + chr2R 17395332 intron Sip1 + chr2R 17395401 intron Sip1 + chr2R_16_17395001 chr2R_17395001 RAL-383 1017 chr2R 17443754 17443799 chr2R 17443850 17443895 8 95 4.0 1.5 2.8 2.1 141 chr2R 17443754 intron EDTP - chr2R 17443824 intron EDTP - chr2R 17443895 intron EDTP - chr2R_8_17440001 chr2R_17440001 RAL-383 1018 chr2R 17458985 17459033 chr2R 17459090 17459138 12 104 7.0 3.5 5.2 1.9 153 chr2R 17458985 intron CG14478 + chr2R 17459062 intron CG14478 + chr2R 17459138 intron CG14478 + chr2R_12_17455001 chr2R_17455001 RAL-383 1019 chr2R 17470346 17470355 chr2R 17470429 17470459 4 98 2.5 1.5 2.0 1.3 113 chr2R 17470346 intron qkr54B + chr2R 17470402 intron qkr54B + chr2R 17470459 intron qkr54B + chr2R_4_17470001 chr2R_17470001 RAL-383 1020 chr2R 17485895 17485941 chr2R 17490677 17490722 F-element 8 4780 6.5 6.0 6.2 1.1 4827 chr2R 17485895 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488308 intron NT5E-2 + chr2R 17490722 intron NT5E-2 + chr2R_8_17485001 chr2R_17485001 RAL-383 1021 chr2R 17519235 17519265 chr2R 17519320 17519350 9 91 1.0 5.5 3.2 2.1 115 chr2R 17519235 3` UTR Patronin - chr2R 17519292 3` UTR Patronin - chr2R 17519350 3` UTR Patronin - chr2R_9_17515001 chr2R_17515001 RAL-383 1022 chr2R 17547555 17547562 chr2R 17547655 17547662 5 99 12.0 3.5 7.8 0.6 107 chr2R 17547555 intergenic RpL18A -,MESR4 + chr2R 17547608 intergenic RpL18A -,MESR4 + chr2R 17547662 intergenic MESR4 +,RpL18A - chr2R_5_17545001 chr2R_17545001 RAL-383 1023 chr2R 17547563 17547602 chr2R 17547654 17547702 13 98 6.5 3.5 5.0 2.2 139 chr2R 17547563 intergenic RpL18A -,MESR4 + chr2R 17547632 intergenic MESR4 +,RpL18A - chr2R 17547702 intergenic MESR4 +,RpL18A - chr2R_13_17545001 chr2R_17545001 RAL-383 1024 chr2R 17655194 17655210 chr2R 17655291 17655302 4 94 7.0 3.0 5.0 0.7 108 chr2R 17655194 intron CCHa1-R - chr2R 17655248 intron CCHa1-R - chr2R 17655302 intron CCHa1-R - chr2R_4_17655001 chr2R_17655001 RAL-383 1025 chr2R 17782345 17782391 chr2R 17783568 17783594 pogo 13 1221 4.5 3.0 3.8 2.7 1249 chr2R 17782345 intergenic CG33981 -,fab1 - chr2R 17782970 intergenic not near genes chr2R 17783594 intergenic mir-31a - chr2R_13_17780001 chr2R_17780001 RAL-383 1026 chr2R 17784007 17784053 chr2R 17784266 17784283 pogo 6 254 2.5 3.0 2.8 1.6 276 chr2R 17784007 intergenic mir-31a - chr2R 17784145 intergenic mir-31a - chr2R 17784283 intergenic mir-31a - chr2R_6_17780001 chr2R_17780001 RAL-383 1027 chr2R 18045652 18045700 chr2R 18046024 18046072 jockey 12 372 2.5 5.5 4.0 2.4 420 chr2R 18045652 intergenic not near genes chr2R 18045862 intergenic not near genes chr2R 18046072 intergenic CG5767 - chr2R_12_18045001 chr2R_18045001 RAL-383 1028 chr2R 18111666 18111715 chr2R 18115554 18115602 F-element 4 3888 6.0 0.0 3.0 1.0 3936 chr2R 18111666 intergenic not near genes chr2R 18113634 intergenic not near genes chr2R 18115602 intergenic not near genes chr2R_4_18110001 chr2R_18110001 RAL-383 1029 chr2R 18204126 18204158 chr2R 18204231 18204263 9 105 1.5 0.0 0.8 5.0 137 chr2R 18204126 intergenic not near genes chr2R 18204194 intergenic not near genes chr2R 18204263 intergenic not near genes chr2R_9_18200001 chr2R_18200001 RAL-383 1030 chr2R 18244008 18244038 chr2R 18244135 18244165 10 126 5.0 3.0 4.0 2.0 157 chr2R 18244008 intergenic not near genes chr2R 18244086 intergenic not near genes chr2R 18244165 intergenic not near genes chr2R_10_18240001 chr2R_18240001 RAL-383 1031 chr2R 18308272 18308317 chr2R 18308390 18308442 15 123 5.5 1.0 3.2 3.6 170 chr2R 18308272 intron sbb - chr2R 18308357 intron sbb - chr2R 18308442 intron sbb - chr2R_15_18305001 chr2R_18305001 RAL-383 1032 chr2R 18358373 18358413 chr2R 18372605 18372643 roo 14 14231 4.0 3.5 3.8 2.9 14270 chr2R 18358373 intergenic not near genes chr2R 18365508 intergenic not near genes chr2R 18372643 intergenic not near genes chr2R_14_18365001 chr2R_18365001 RAL-383 1033 chr2R 18390851 18390900 chr2R 18390958 18391007 8 107 3.0 3.5 3.2 1.9 156 chr2R 18390851 intergenic CG15068 - chr2R 18390929 intergenic CG15068 - chr2R 18391007 intergenic CG15068 - chr2R_8_18390001 chr2R_18390001 RAL-383 1034 chr2R 18391958 18391989 chr2R 18392054 18392090 6 100 2.5 3.0 2.8 1.6 132 chr2R 18391958 intergenic not near genes chr2R 18392024 intergenic not near genes chr2R 18392090 intergenic not near genes chr2R_6_18390001 chr2R_18390001 RAL-383 1035 chr2R 18405731 18405782 chr2R 18405831 18405882 8 100 4.0 0.0 2.0 2.7 151 chr2R 18405731 intergenic GstE6 +,GstE5 + chr2R 18405806 intergenic GstE6 +,GstE5 + chr2R 18405882 intergenic GstE6 + chr2R_8_18405001 chr2R_18405001 RAL-383 1036 chr2R 18407274 18407307 chr2R 18408232 18408235 5 935 24.5 14.5 19.5 0.2 961 chr2R 18407274 exon GstE7 + chr2R 18407754 intergenic GstE7 +,GstE8 + chr2R 18408235 exon GstE8 + chr2R_5_18405001 chr2R_18405001 RAL-383 1037 chr2R 18526576 18526588 chr2R 18526678 18526690 4 101 7.5 4.5 6.0 0.6 114 chr2R 18526576 intergenic CG43066 + chr2R 18526633 intergenic CG43066 + chr2R 18526690 intergenic CG43066 + chr2R_4_18525001 chr2R_18525001 RAL-383 1038 chr2R 18526593 18526618 chr2R 18526677 18526685 4 89 5.0 4.5 4.8 0.7 92 chr2R 18526593 intergenic CG43066 + chr2R 18526639 intergenic CG43066 + chr2R 18526685 intergenic CG43066 + chr2R_4_18525001 chr2R_18525001 RAL-383 1039 chr2R 18553424 18553443 chr2R 18553524 18553543 6 100 6.0 5.0 5.5 0.9 119 chr2R 18553424 intergenic not near genes chr2R 18553484 intergenic not near genes chr2R 18553543 intergenic not near genes chr2R_6_18550001 chr2R_18550001 RAL-383 1040 chr2R 18553448 18553468 chr2R 18553521 18553568 5 95 3.5 5.0 4.2 1.0 120 chr2R 18553448 intergenic not near genes chr2R 18553508 intergenic not near genes chr2R 18553568 intergenic not near genes chr2R_5_18550001 chr2R_18550001 RAL-383 1041 chr2R 18575130 18575161 chr2R 18575367 18575398 8 237 2.5 1.5 2.0 2.7 268 chr2R 18575130 intron GEFmeso - chr2R 18575264 intron GEFmeso - chr2R 18575398 intron GEFmeso - chr2R_8_18575001 chr2R_18575001 RAL-383 1042 chr2R 18575812 18575830 chr2R 18581989 18582038 3S18 9 6199 2.0 5.5 3.8 1.9 6226 chr2R 18575812 intron GEFmeso - chr2R 18578925 intron GEFmeso - chr2R 18582038 intron GEFmeso - chr2R_9_18575001 chr2R_18575001 RAL-383 1043 chr2R 18590851 18590898 chr2R 18600022 18600024 roo 5 9160 2.0 1.0 1.5 2.0 9173 chr2R 18590851 intron GEFmeso - chr2R 18595438 intron GEFmeso - chr2R 18600024 intron GEFmeso - chr2R_5_18595001 chr2R_18595001 RAL-383 1044 chr2R 18646412 18646429 chr2R 18646577 18646594 4 165 7.5 3.0 5.2 0.6 182 chr2R 18646412 intron SP2637 - chr2R 18646503 intron SP2637 - chr2R 18646594 intron SP2637 - chr2R_4_18645001 chr2R_18645001 RAL-383 1045 chr2R 18692888 18692902 chr2R 18692995 18693009 5 107 3.5 3.0 3.2 1.2 121 chr2R 18692888 intron Sik3 + chr2R 18692948 intron Sik3 + chr2R 18693009 intron Sik3 + chr2R_5_18690001 chr2R_18690001 RAL-383 1046 chr2R 18713238 18713270 chr2R 18713325 18713367 14 95 7.0 3.5 5.2 2.3 129 chr2R 18713238 intergenic not near genes chr2R 18713302 intergenic not near genes chr2R 18713367 intergenic not near genes chr2R_14_18710001 chr2R_18710001 RAL-383 1047 chr2R 18732344 18732378 chr2R 18732481 18732532 13 150 4.5 5.0 4.8 2.2 188 chr2R 18732344 intron Hs3st-A + chr2R 18732438 intron Hs3st-A + chr2R 18732532 intron Hs3st-A + chr2R_13_18730001 chr2R_18730001 RAL-383 1048 chr2R 18831601 18831628 chr2R 18831709 18831736 4 108 17.5 26.0 21.8 0.2 135 chr2R 18831601 intron CG15082 + chr2R 18831668 intron CG15082 + chr2R 18831736 intron CG15082 + chr2R_4_18830001 chr2R_18830001 RAL-383 1049 chr2R 18835881 18835897 chr2R 18835983 18835999 5 101 5.5 0.0 2.8 1.3 118 chr2R 18835881 intron CG15083 + chr2R 18835940 intron CG15083 + chr2R 18835999 intron CG15083 + chr2R_5_18835001 chr2R_18835001 RAL-383 1050 chr2R 18857389 18857406 chr2R 18857485 18857502 9 96 4.5 9.0 6.8 1.2 113 chr2R 18857389 exon Jheh2 - chr2R 18857446 intron Jheh2 - chr2R 18857502 intron Jheh2 - chr2R_9_18855001 chr2R_18855001 RAL-383 1051 chr2R 18862289 18862342 chr2R 18862396 18862474 8 109 0.0 0.0 0.0 8.0 185 chr2R 18862289 intergenic Jheh3 - chr2R 18862382 intergenic Jheh3 -,CG43069 + chr2R 18862474 intergenic CG43069 +,Jheh3 - chr2R_8_18860001 chr2R_18860001 RAL-383 1052 chr2R 18953144 18953192 chr2R 18953251 18953299 13 106 2.5 4.5 3.5 2.9 155 chr2R 18953144 intron sano + chr2R 18953222 intron sano + chr2R 18953299 intron sano + chr2R_13_18950001 chr2R_18950001 RAL-383 1053 chr2R 18985285 18985336 chr2R 18985383 18985426 23 95 6.5 4.5 5.5 3.5 141 chr2R 18985285 intergenic not near genes chr2R 18985356 intergenic not near genes chr2R 18985426 intergenic not near genes chr2R_23_18985001 chr2R_18985001 RAL-383 1054 chr2R 18989004 18989046 chr2R 18989102 18989144 19 98 4.5 2.0 3.2 4.5 140 chr2R 18989004 intron tn + chr2R 18989074 intron tn + chr2R 18989144 intron tn + chr2R_19_18985001 chr2R_18985001 RAL-383 1055 chr2R 19015409 19015462 chr2R 19015517 19015565 5 97 1.5 2.0 1.8 1.8 156 chr2R 19015409 intergenic not near genes chr2R 19015487 intergenic not near genes chr2R 19015565 intergenic not near genes chr2R_5_19015001 chr2R_19015001 RAL-383 1056 chr2R 19026026 19026052 chr2R 19026186 19026212 12 160 10.5 2.0 6.2 1.7 186 chr2R 19026026 intron 5-HT1B - chr2R 19026119 intron 5-HT1B - chr2R 19026212 intron 5-HT1B - chr2R_12_19025001 chr2R_19025001 RAL-383 1057 chr2R 19026941 19026969 chr2R 19027040 19027068 5 99 5.0 0.0 2.5 1.4 127 chr2R 19026941 intron 5-HT1B - chr2R 19027004 intron 5-HT1B - chr2R 19027068 intron 5-HT1B - chr2R_5_19025001 chr2R_19025001 RAL-383 1058 chr2R 19040066 19040112 chr2R 19040300 19040349 14 230 2.5 4.0 3.2 3.3 283 chr2R 19040066 intergenic not near genes chr2R 19040208 intergenic not near genes chr2R 19040349 intergenic not near genes chr2R_14_19040001 chr2R_19040001 RAL-383 1059 chr2R 19042679 19042696 chr2R 19042784 19042800 4 103 4.5 9.0 6.8 0.5 121 chr2R 19042679 intergenic not near genes chr2R 19042740 intergenic not near genes chr2R 19042800 intergenic not near genes chr2R_4_19040001 chr2R_19040001 RAL-383 1060 chr2R 19065796 19065836 chr2R 19065900 19065929 4 100 2.5 4.0 3.2 1.0 133 chr2R 19065796 intergenic not near genes chr2R 19065862 intergenic not near genes chr2R 19065929 intergenic not near genes chr2R_4_19065001 chr2R_19065001 RAL-383 1061 chr2R 19103932 19103987 chr2R 19104114 19104169 11 180 3.0 2.5 2.8 2.9 237 chr2R 19103932 intron 5-HT1A + chr2R 19104050 intron 5-HT1A + chr2R 19104169 intron 5-HT1A + chr2R_11_19100001 chr2R_19100001 RAL-383 1062 chr2R 19244459 19244472 chr2R 19244558 19244571 5 99 0.0 5.5 2.8 1.3 112 chr2R 19244459 intergenic not near genes chr2R 19244515 intergenic not near genes chr2R 19244571 intergenic not near genes chr2R_5_19240001 chr2R_19240001 RAL-383 1063 chr2R 19283776 19283819 chr2R 19286762 19286805 16 2984 17.0 4.0 10.5 1.4 3029 chr2R 19283776 exon CG11906 - chr2R 19285290 intergenic CG10476 -,CG10474 - chr2R 19286805 intergenic CG10474 - chr2R_16_19285001 chr2R_19285001 RAL-383 1064 chr2R 19282933 19282980 chr2R 19285510 19285576 8 2596 16.0 14.5 15.2 0.5 2643 chr2R 19282933 exon CG11906 - chr2R 19284254 intergenic CG11906 -,CG10476 - chr2R 19285576 exon CG10474 - chr2R_8_19280001 chr2R_19280001 RAL-383 1065 chr2R 19300943 19300993 chr2R 19301046 19301097 13 102 2.5 4.0 3.2 3.1 154 chr2R 19300943 intron Tab2 + chr2R 19301020 intron Tab2 + chr2R 19301097 intron Tab2 + chr2R_13_19300001 chr2R_19300001 RAL-383 1066 chr2R 19331212 19331264 chr2R 19331312 19331344 6 92 6.0 5.5 5.8 0.9 132 chr2R 19331212 intron,intron Rgk1 -,CG34045 + chr2R 19331278 intron,intron Rgk1 -,CG34045 + chr2R 19331344 intron,intron Rgk1 -,CG34045 + chr2R_6_19330001 chr2R_19330001 RAL-383 1067 chr2R 19536446 19536500 chr2R 19536548 19536602 20 101 3.0 4.0 3.5 4.4 156 chr2R 19536446 intron sm - chr2R 19536524 intron sm - chr2R 19536602 intron sm - chr2R_20_19535001 chr2R_19535001 RAL-383 1068 chr2R 19544996 19545009 chr2R 19545108 19545121 4 110 5.0 2.0 3.5 0.9 125 chr2R 19544996 intron sm - chr2R 19545058 intron sm - chr2R 19545121 intron sm - chr2R_4_19545001 chr2R_19545001 RAL-383 1069 chr2R 19545010 19545049 chr2R 19545107 19545161 6 109 1.5 2.0 1.8 2.1 151 chr2R 19545010 intron sm - chr2R 19545086 intron sm - chr2R 19545161 intron sm - chr2R_6_19545001 chr2R_19545001 RAL-383 1070 chr2R 19773990 19774039 chr2R 19774123 19774172 17 131 3.0 5.5 4.2 3.3 182 chr2R 19773990 intergenic not near genes chr2R 19774081 intergenic not near genes chr2R 19774172 intergenic not near genes chr2R_17_19770001 chr2R_19770001 RAL-383 1071 chr2R 19776583 19776627 chr2R 19779915 19779962 jockey 14 3338 4.0 5.5 4.8 2.4 3379 chr2R 19776583 intergenic not near genes chr2R 19778272 intergenic not near genes chr2R 19779962 intergenic not near genes chr2R_14_19775001 chr2R_19775001 RAL-383 1072 chr2R 19805184 19805198 chr2R 19805283 19805297 7 98 6.0 2.5 4.2 1.3 113 chr2R 19805184 intergenic not near genes chr2R 19805240 intergenic not near genes chr2R 19805297 intergenic not near genes chr2R_7_19805001 chr2R_19805001 RAL-383 1073 chr2R 19807655 19807700 chr2R 19807752 19807802 11 101 2.5 4.5 3.5 2.4 147 chr2R 19807655 intergenic not near genes chr2R 19807728 intergenic not near genes chr2R 19807802 intergenic not near genes chr2R_11_19805001 chr2R_19805001 RAL-383 1074 chr2R 19957453 19957463 chr2R 19962630 19962685 copia 5 5208 3.5 3.5 3.5 1.1 5232 chr2R 19957453 intergenic CG44623 + chr2R 19960069 intergenic not near genes chr2R 19962685 intergenic not near genes chr2R_5_19960001 chr2R_19960001 RAL-383 1075 chr2R 20065305 20065332 chr2R 20065502 20065527 7 195 0.0 2.0 1.0 3.5 222 chr2R 20065305 intergenic not near genes chr2R 20065416 intergenic not near genes chr2R 20065527 intergenic not near genes chr2R_7_20065001 chr2R_20065001 RAL-383 1076 chr2R 20069231 20069253 chr2R 20071889 20071911 opus 4 2657 0.5 5.0 2.8 1.1 2680 chr2R 20069231 intergenic not near genes chr2R 20070571 intergenic not near genes chr2R 20071911 intergenic not near genes chr2R_4_20070001 chr2R_20070001 RAL-383 1077 chr2R 20080600 20080624 chr2R 20080689 20080716 6 93 0.0 9.0 4.5 1.1 116 chr2R 20080600 intergenic not near genes chr2R 20080658 intergenic not near genes chr2R 20080716 intergenic not near genes chr2R_6_20080001 chr2R_20080001 RAL-383 1078 chr2R 20118857 20118902 chr2R 20118965 20118979 12 98 1.0 0.5 0.8 6.7 122 chr2R 20118857 intergenic not near genes chr2R 20118918 intergenic not near genes chr2R 20118979 intergenic not near genes chr2R_12_20115001 chr2R_20115001 RAL-383 1079 chr2R 20125724 20125740 chr2R 20125820 20125836 9 96 7.5 9.5 8.5 0.9 112 chr2R 20125724 intergenic not near genes chr2R 20125780 intergenic not near genes chr2R 20125836 intergenic not near genes chr2R_9_20125001 chr2R_20125001 RAL-383 1080 chr2R 20223938 20223986 chr2R 20224043 20224091 13 105 4.5 3.0 3.8 2.7 153 chr2R 20223938 intergenic not near genes chr2R 20224014 intergenic not near genes chr2R 20224091 intergenic not near genes chr2R_13_20220001 chr2R_20220001 RAL-383 1081 chr2R 20252015 20252062 chr2R 20252143 20252190 24 122 4.5 4.5 4.5 4.4 175 chr2R 20252015 intron CG9864 - chr2R 20252102 intron CG9864 - chr2R 20252190 intron CG9864 - chr2R_24_20250001 chr2R_20250001 RAL-383 1082 chr2R 20265470 20265475 chr2R 20276759 20276763 4 11288 25.0 27.0 26.0 0.1 11293 chr2R 20265470 exon CG8908 + chr2R 20271116 intergenic CG8908 + chr2R 20276763 exon CG9143 - chr2R_4_20270001 chr2R_20270001 RAL-383 1083 chr2R 20265468 20265512 chr2R 20276764 20276800 12 11291 26.5 28.0 27.2 0.4 11332 chr2R 20265468 exon CG8908 + chr2R 20271134 intergenic CG8908 + chr2R 20276800 exon CG9143 - chr2R_12_20270001 chr2R_20270001 RAL-383 1084 chr2R 20411563 20411610 chr2R 20411664 20411714 11 106 0.5 4.0 2.2 3.4 151 chr2R 20411563 intergenic not near genes chr2R 20411638 intergenic not near genes chr2R 20411714 intergenic not near genes chr2R_11_20410001 chr2R_20410001 RAL-383 1085 chr2R 20465957 20465996 chr2R 20466062 20466099 6 93 3.0 1.0 2.0 2.0 142 chr2R 20465957 intron CG12484 + chr2R 20466028 intron CG12484 + chr2R 20466099 intron CG12484 + chr2R_6_20465001 chr2R_20465001 RAL-383 1086 chr2R 20496988 20497261 chr2R 20497150 20497360 21 119 3.0 3.0 3.0 5.2 372 chr2R 20496988 intergenic not near genes chr2R 20497174 intergenic not near genes chr2R 20497360 intergenic not near genes chr2R_21_20495001 chr2R_20495001 RAL-383 1087 chr2R 20502269 20502306 chr2R 20502400 20502440 16 131 3.0 4.5 3.8 3.3 171 chr2R 20502269 intergenic not near genes chr2R 20502354 intergenic not near genes chr2R 20502440 intergenic not near genes chr2R_16_20500001 chr2R_20500001 RAL-383 1088 chr2R 20506216 20506243 chr2R 20506316 20506329 5 102 2.5 1.0 1.8 1.8 113 chr2R 20506216 3` UTR,5` UTR CR44644 -,CR44645 + chr2R 20506272 3` UTR,5` UTR CR44644 -,CR44645 + chr2R 20506329 3` UTR,5` UTR CR44644 -,CR44645 + chr2R_5_20505001 chr2R_20505001 RAL-383 1089 chr2R 20541971 20542015 chr2R 20542069 20542113 13 98 1.0 2.5 1.8 4.6 142 chr2R 20541971 intergenic not near genes chr2R 20542042 intergenic not near genes chr2R 20542113 intergenic not near genes chr2R_13_20540001 chr2R_20540001 RAL-383 1090 chr2R 20555313 20555337 chr2R 20555417 20555435 6 103 5.0 2.5 3.8 1.2 122 chr2R 20555313 intergenic not near genes chr2R 20555374 intergenic not near genes chr2R 20555435 intergenic not near genes chr2R_6_20555001 chr2R_20555001 RAL-383 1091 chr2R 20584455 20584482 chr2R 20584557 20584584 4 96 3.0 3.0 3.0 1.0 129 chr2R 20584455 intergenic mir-313 -,mir-2498 -,mir-312 -,mir-311 - chr2R 20584520 intergenic mir-2498 -,mir-313 -,mir-312 - chr2R 20584584 intergenic mir-2498 -,mir-313 -,mir-312 - chr2R_4_20580001 chr2R_20580001 RAL-383 1092 chr2R 20739447 20739468 chr2R 20744227 20744256 F-element 4 4784 2.5 4.5 3.5 0.9 4809 chr2R 20739447 intron dpr + chr2R 20741852 intron dpr + chr2R 20744256 intron dpr + chr2R_4_20740001 chr2R_20740001 RAL-383 1093 chr2R 20759798 20759816 chr2R 20759890 20759901 5 91 0.0 4.5 2.2 1.6 103 chr2R 20759798 intergenic not near genes chr2R 20759850 intergenic not near genes chr2R 20759901 intergenic not near genes chr2R_5_20755001 chr2R_20755001 RAL-383 1094 chr2R 20783292 20783331 chr2R 20788084 20788123 F-element 10 4791 2.0 4.5 3.2 2.4 4831 chr2R 20783292 intergenic not near genes chr2R 20785708 intergenic not near genes chr2R 20788123 intergenic CG43666 - chr2R_10_20785001 chr2R_20785001 RAL-383 1095 chr2R 20888946 20888972 chr2R 20889043 20889071 12 94 2.5 7.5 5.0 2.0 125 chr2R 20888946 intron otp - chr2R 20889008 intron otp - chr2R 20889071 intron otp - chr2R_12_20885001 chr2R_20885001 RAL-383 1096 chr2R 20962887 20962933 chr2R 20963005 20963051 17 116 3.5 2.5 3.0 4.2 164 chr2R 20962887 intergenic not near genes chr2R 20962969 intergenic not near genes chr2R 20963051 intergenic not near genes chr2R_17_20960001 chr2R_20960001 RAL-383 1097 chr2R 20972607 20972637 chr2R 20972765 20972790 9 163 7.0 2.0 4.5 1.6 183 chr2R 20972607 intergenic CG15649 - chr2R 20972698 intergenic CG15649 - chr2R 20972790 intergenic CG15649 - chr2R_9_20970001 chr2R_20970001 RAL-383 1098 chr2R 21060613 21060654 chr2R 21060709 21060750 9 96 4.5 2.5 3.5 2.0 137 chr2R 21060613 intergenic CG15653 -,mRpL54 + chr2R 21060682 intergenic mRpL54 +,CG15653 - chr2R 21060750 intergenic mRpL54 +,CG15653 - chr2R_9_21060001 chr2R_21060001 RAL-383 1099 chr2R 21285420 21285435 chr2R 21285517 21285532 9 97 9.5 9.5 9.5 0.9 112 chr2R 21285420 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285476 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285532 3` UTR,3` UTR MFS16 +,CG10505 - chr2R_9_21285001 chr2R_21285001 RAL-383 1100 chr2R 21368061 21368111 chr2R 21368704 21368751 12 641 3.0 3.0 3.0 3.0 690 chr2R 21368061 intron cv-2 - chr2R 21368406 intron cv-2 - chr2R 21368751 intron cv-2 - chr2R_12_21365001 chr2R_21365001 RAL-383 1101 chr2R 21417257 21417264 chr2R 21417378 21417385 6 121 6.0 0.0 3.0 1.5 128 chr2R 21417257 intron Sdc - chr2R 21417321 intron Sdc - chr2R 21417385 intron Sdc - chr2R_6_21415001 chr2R_21415001 RAL-383 1102 chr2R 21421327 21421353 chr2R 21421426 21421450 12 97 5.5 11.0 8.2 1.3 123 chr2R 21421327 intron Sdc - chr2R 21421388 intron Sdc - chr2R 21421450 intron Sdc - chr2R_12_21420001 chr2R_21420001 RAL-383 1103 chr2R 21486660 21486711 chr2R 21486777 21486828 10 113 6.0 1.5 3.8 2.1 168 chr2R 21486660 exon Sara + chr2R 21486744 3` UTR Sara + chr2R 21486828 3` UTR Sara + chr2R_10_21485001 chr2R_21485001 RAL-383 1104 chr2R 21721575 21721609 chr2R 21721668 21721716 6 92 3.5 0.0 1.8 2.1 141 chr2R 21721575 intron LBR + chr2R 21721646 intron LBR + chr2R 21721716 intron LBR + chr2R_6_21720001 chr2R_21720001 RAL-383 1105 chr2R 21738264 21738311 chr2R 21747444 21747458 roo 4 9162 0.5 2.0 1.2 1.8 9194 chr2R 21738264 intergenic not near genes chr2R 21742861 intergenic not near genes chr2R 21747458 intergenic not near genes chr2R_4_21740001 chr2R_21740001 RAL-383 1106 chr2R 21753062 21753114 chr2R 21753567 21753619 roo 19 504 1.5 4.5 3.0 4.8 557 chr2R 21753062 intergenic not near genes chr2R 21753340 intergenic not near genes chr2R 21753619 intergenic not near genes chr2R_19_21750001 chr2R_21750001 RAL-383 1107 chr2R 21804090 21804280 chr2R 21804170 21804386 7 102 0.5 1.0 0.8 3.9 296 chr2R 21804090 5` UTR CR9284 + chr2R 21804238 5` UTR CR9284 + chr2R 21804386 intergenic CR9284 + chr2R_7_21800001 chr2R_21800001 RAL-383 1108 chr2R 21809502 21809555 chr2R 21817762 21817815 roo 8 8260 3.5 3.5 3.5 1.8 8313 chr2R 21809502 intergenic not near genes chr2R 21813658 intergenic not near genes chr2R 21817815 intergenic not near genes chr2R_8_21810001 chr2R_21810001 RAL-383 1109 chr2R 21831122 21831126 chr2R 21831220 21831224 4 98 0.0 3.0 1.5 1.6 102 chr2R 21831122 intron CG13492 - chr2R 21831173 intron CG13492 - chr2R 21831224 intron CG13492 - chr2R_4_21830001 chr2R_21830001 RAL-383 1110 chr2R 21857334 21857372 chr2R 21857437 21857437 9 99 5.5 6.0 5.8 1.3 103 chr2R 21857334 intergenic not near genes chr2R 21857386 intergenic not near genes chr2R 21857437 intergenic not near genes chr2R_9_21855001 chr2R_21855001 RAL-383 1111 chr2R 21870937 21870963 chr2R 21871036 21871058 4 98 5.0 1.5 3.2 1.0 121 chr2R 21870937 intergenic not near genes chr2R 21870998 intergenic not near genes chr2R 21871058 intergenic not near genes chr2R_4_21870001 chr2R_21870001 RAL-383 1112 chr2R 21886111 21886155 chr2R 21886210 21886243 11 93 4.0 0.0 2.0 3.7 132 chr2R 21886111 intron Fili + chr2R 21886177 intron Fili + chr2R 21886243 intron Fili + chr2R_11_21885001 chr2R_21885001 RAL-383 1113 chr2R 21888298 21888312 chr2R 21888409 21888423 4 111 4.0 3.5 3.8 0.8 125 chr2R 21888298 intron Fili + chr2R 21888360 intron Fili + chr2R 21888423 intron Fili + chr2R_4_21885001 chr2R_21885001 RAL-383 1114 chr2R 21906250 21906291 chr2R 21906371 21906412 12 120 4.0 1.5 2.8 3.2 162 chr2R 21906250 intron Fili + chr2R 21906331 intron Fili + chr2R 21906412 intron Fili + chr2R_12_21905001 chr2R_21905001 RAL-383 1115 chr2R 21922579 21922617 chr2R 21922676 21922714 9 97 1.5 4.5 3.0 2.2 135 chr2R 21922579 intron Fili + chr2R 21922646 intron Fili + chr2R 21922714 intron Fili + chr2R_9_21920001 chr2R_21920001 RAL-383 1116 chr2R 21995624 21995660 chr2R 21995735 21995770 5 106 4.0 2.5 3.2 1.2 146 chr2R 21995624 intron CG34370 - chr2R 21995697 intron CG34370 - chr2R 21995770 intron CG34370 - chr2R_5_21995001 chr2R_21995001 RAL-383 1117 chr2R 22003072 22003112 chr2R 22003177 22003218 12 99 4.0 4.0 4.0 2.4 146 chr2R 22003072 intron CG34370 - chr2R 22003145 intron CG34370 - chr2R 22003218 intron CG34370 - chr2R_12_22000001 chr2R_22000001 RAL-383 1118 chr2R 22012975 22013011 chr2R 22013090 22013126 10 115 2.5 3.0 2.8 2.6 151 chr2R 22012975 intron CG34370 - chr2R 22013050 intron CG34370 - chr2R 22013126 intron CG34370 - chr2R_10_22010001 chr2R_22010001 RAL-383 1119 chr2R 22027903 22027952 chr2R 22027995 22028049 12 90 4.0 5.5 4.8 2.1 146 chr2R 22027903 intron CG34370 - chr2R 22027976 intron CG34370 - chr2R 22028049 intron CG34370 - chr2R_12_22025001 chr2R_22025001 RAL-383 1120 chr2R 22029493 22029503 chr2R 22029657 22029667 6 164 3.5 4.5 4.0 1.2 174 chr2R 22029493 intron CG34370 - chr2R 22029580 intron CG34370 - chr2R 22029667 intron CG34370 - chr2R_6_22025001 chr2R_22025001 RAL-383 1121 chr2R 22072686 22072707 chr2R 22072778 22072812 10 101 3.5 2.5 3.0 2.5 126 chr2R 22072686 intron CG11474 - chr2R 22072749 intron CG11474 - chr2R 22072812 exon CG11474 - chr2R_10_22070001 chr2R_22070001 RAL-383 1122 chr2R 22095940 22095993 chr2R 22096043 22096096 21 102 1.0 2.0 1.5 8.4 156 chr2R 22095940 intron CG11073 - chr2R 22096018 intron CG11073 - chr2R 22096096 intron CG11073 - chr2R_21_22095001 chr2R_22095001 RAL-383 1123 chr2R 22096586 22096595 chr2R 22097917 22097951 5 1351 6.0 15.0 10.5 0.4 1365 chr2R 22096586 intron CG11073 - chr2R 22097268 intron CG11073 - chr2R 22097951 intron CG11073 - chr2R_5_22095001 chr2R_22095001 RAL-383 1124 chr2R 22096598 22096625 chr2R 22098190 22098237 8 1598 6.0 22.5 14.2 0.5 1639 chr2R 22096598 intron CG11073 - chr2R 22097418 intron CG11073 - chr2R 22098237 intron CG11073 - chr2R_8_22095001 chr2R_22095001 RAL-383 1125 chr2R 22099856 22099878 chr2R 22099957 22099978 7 101 3.5 5.5 4.5 1.3 122 chr2R 22099856 intergenic CG11073 - chr2R 22099917 intergenic CG11073 - chr2R 22099978 intergenic CG11073 - chr2R_7_22095001 chr2R_22095001 RAL-383 1126 chr2R 22280212 22280247 chr2R 22280407 22280444 6 195 1.5 1.0 1.2 2.7 232 chr2R 22280212 intron dve + chr2R 22280328 intron dve + chr2R 22280444 intron dve + chr2R_6_22280001 chr2R_22280001 RAL-383 1127 chr2R 22349688 22349721 chr2R 22351474 22351525 jockey 7 1798 2.0 4.5 3.2 1.7 1837 chr2R 22349688 intron Liprin-gamma - chr2R 22350606 intron Liprin-gamma - chr2R 22351525 intron Liprin-gamma - chr2R_7_22350001 chr2R_22350001 RAL-383 1128 chr2R 22360367 22360401 chr2R 22360820 22360822 jockey 9 444 9.5 3.0 6.2 1.2 455 chr2R 22360367 intron Liprin-gamma - chr2R 22360594 intron Liprin-gamma - chr2R 22360822 intron Liprin-gamma - chr2R_9_22360001 chr2R_22360001 RAL-383 1129 chr2R 22360196 22360247 chr2R 22361470 22361511 14 1270 31.5 32.0 31.8 0.4 1315 chr2R 22360196 intron Liprin-gamma - chr2R 22360854 intron Liprin-gamma - chr2R 22361511 intron Liprin-gamma - chr2R_14_22360001 chr2R_22360001 RAL-383 1130 chr2R 22460360 22460402 chr2R 22460459 22460501 12 98 2.5 4.0 3.2 2.9 141 chr2R 22460360 intron CG10384 + chr2R 22460430 intron CG10384 + chr2R 22460501 intron CG10384 + chr2R_12_22460001 chr2R_22460001 RAL-383 1131 chr2R 22499854 22499877 chr2R 22499932 22499973 6 92 0.0 3.5 1.8 2.1 119 chr2R 22499854 intron px - chr2R 22499914 intron px - chr2R 22499973 intron px - chr2R_6_22495001 chr2R_22495001 RAL-383 1132 chr2R 22525738 22525781 chr2R 22529308 22529351 jockey 12 3572 3.5 2.0 2.8 3.2 3613 chr2R 22525738 intron px - chr2R 22527544 intron px - chr2R 22529351 intron px - chr2R_12_22525001 chr2R_22525001 RAL-383 1133 chr2R 22580433 22580443 chr2R 22586596 22586606 diver 4 6164 1.5 6.0 3.8 0.8 6173 chr2R 22580433 intron dnr1 - chr2R 22583520 intron dnr1 - chr2R 22586606 intron dnr1 - chr2R_4_22580001 chr2R_22580001 RAL-383 1134 chr2R 22629382 22629389 chr2R 22629479 22629486 6 97 6.5 3.5 5.0 1.0 104 chr2R 22629382 intron CG33143 + chr2R 22629434 intron CG33143 + chr2R 22629486 intron CG33143 + chr2R_6_22625001 chr2R_22625001 RAL-383 1135 chr2R 22679749 22679780 chr2R 22679830 22679857 5 77 0.0 0.0 0.0 5.0 108 chr2R 22679749 intergenic not near genes chr2R 22679803 intergenic not near genes chr2R 22679857 intergenic not near genes chr2R_5_22675001 chr2R_22675001 RAL-383 1136 chr2R 22774956 22774996 chr2R 22775385 22775435 jockey 13 438 8.0 1.0 4.5 2.4 479 chr2R 22774956 intron CG42260 - chr2R 22775196 intron CG42260 - chr2R 22775435 intron CG42260 - chr2R_13_22775001 chr2R_22775001 RAL-383 1137 chr2R 22789800 22789839 chr2R 22790106 22790145 7 303 6.5 5.5 6.0 1.0 345 chr2R 22789800 intron CG42260 - chr2R 22789972 intron CG42260 - chr2R 22790145 intron CG42260 - chr2R_7_22785001 chr2R_22785001 RAL-383 1138 chr2R 22810547 22810602 chr2R 22810683 22810738 8 131 3.0 0.0 1.5 3.2 191 chr2R 22810547 intron stl + chr2R 22810642 intron stl + chr2R 22810738 intron stl + chr2R_8_22810001 chr2R_22810001 RAL-383 1139 chr2R 22843015 22843043 chr2R 22844997 22845025 flea 7 1982 4.5 4.0 4.2 1.3 2010 chr2R 22843015 intergenic CG9826 + chr2R 22844020 intergenic not near genes chr2R 22845025 intergenic not near genes chr2R_7_22840001 chr2R_22840001 RAL-383 1140 chr2R 22988610 22988648 chr2R 22988710 22988745 6 99 2.0 4.0 3.0 1.5 135 chr2R 22988610 intron twi + chr2R 22988678 intron twi + chr2R 22988745 intron twi + chr2R_6_22985001 chr2R_22985001 RAL-383 1141 chr2R 23045319 23045359 chr2R 23045553 23045593 10 231 5.0 7.0 6.0 1.4 274 chr2R 23045319 intron twi + chr2R 23045456 intron twi + chr2R 23045593 intron twi + chr2R_10_23045001 chr2R_23045001 RAL-383 1142 chr2R 23052629 23052687 chr2R 23052725 23052772 13 95 5.5 4.5 5.0 2.2 143 chr2R 23052629 intergenic not near genes chr2R 23052700 intergenic not near genes chr2R 23052772 intergenic not near genes chr2R_13_23050001 chr2R_23050001 RAL-383 1143 chr2R 23122893 23122938 chr2R 23122993 23123038 9 101 2.0 0.5 1.2 4.1 145 chr2R 23122893 intergenic not near genes chr2R 23122966 intergenic not near genes chr2R 23123038 intergenic not near genes chr2R_9_23120001 chr2R_23120001 RAL-383 1144 chr2R 23188539 23188588 chr2R 23188637 23188673 9 96 3.0 5.5 4.2 1.7 134 chr2R 23188539 intron CG34371 - chr2R 23188606 intron CG34371 - chr2R 23188673 intron CG34371 - chr2R_9_23185001 chr2R_23185001 RAL-383 1145 chr2R 23189997 23190016 chr2R 23190097 23190116 6 100 9.5 0.0 4.8 1.0 119 chr2R 23189997 intron CG34371 - chr2R 23190056 intron CG34371 - chr2R 23190116 intron CG34371 - chr2R_6_23190001 chr2R_23190001 RAL-383 1146 chr2R 23218995 23219019 chr2R 23219254 23219270 8 257 6.0 0.0 3.0 2.0 275 chr2R 23218995 intergenic not near genes chr2R 23219132 intergenic not near genes chr2R 23219270 intergenic not near genes chr2R_8_23215001 chr2R_23215001 RAL-383 1147 chr2R 23276281 23276328 chr2R 23276387 23276415 11 101 6.5 2.5 4.5 2.0 134 chr2R 23276281 intergenic not near genes chr2R 23276348 intergenic not near genes chr2R 23276415 intergenic not near genes chr2R_11_23275001 chr2R_23275001 RAL-383 1148 chr2R 23278006 23278055 chr2R 23278229 23278278 14 221 2.0 4.5 3.2 3.3 272 chr2R 23278006 intergenic not near genes chr2R 23278142 intergenic not near genes chr2R 23278278 intergenic not near genes chr2R_14_23275001 chr2R_23275001 RAL-383 1149 chr2R 23356279 23356310 chr2R 23356361 23356362 13 96 2.0 2.5 2.2 4.1 83 chr2R 23356279 3` UTR Rpi + chr2R 23356320 3` UTR Rpi + chr2R 23356362 3` UTR Rpi + chr2R_13_23355001 chr2R_23355001 RAL-383 1150 chr2R 23423718 23423774 chr2R 23423896 23423952 14 169 1.5 3.0 2.2 4.4 234 chr2R 23423718 intron CG9815 - chr2R 23423835 intron CG9815 - chr2R 23423952 intron CG9815 - chr2R_14_23420001 chr2R_23420001 RAL-383 1151 chr2R 23485388 23485403 chr2R 23485490 23485505 6 102 3.0 6.0 4.5 1.1 117 chr2R 23485388 exon CG43795 + chr2R 23485446 intron CG43795 + chr2R 23485505 intron CG43795 + chr2R_6_23485001 chr2R_23485001 RAL-383 1152 chr2R 23496016 23496047 chr2R 23496117 23496148 11 99 5.0 8.0 6.5 1.5 132 chr2R 23496016 intergenic not near genes chr2R 23496082 intergenic not near genes chr2R 23496148 intergenic not near genes chr2R_11_23495001 chr2R_23495001 RAL-383 1153 chr2R 23508898 23508937 chr2R 23509035 23509074 15 135 4.5 3.0 3.8 3.1 176 chr2R 23508898 intergenic not near genes chr2R 23508986 intergenic not near genes chr2R 23509074 intergenic not near genes chr2R_15_23505001 chr2R_23505001 RAL-383 1154 chr2R 23518175 23518200 chr2R 23518273 23518298 6 98 5.0 2.0 3.5 1.3 123 chr2R 23518175 intergenic not near genes chr2R 23518236 intergenic not near genes chr2R 23518298 intergenic not near genes chr2R_6_23515001 chr2R_23515001 RAL-383 1155 chr2R 23653955 23654003 chr2R 23654052 23654099 8 94 4.5 4.0 4.2 1.5 144 chr2R 23653955 3` UTR retn + chr2R 23654027 3` UTR retn + chr2R 23654099 3` UTR retn + chr2R_8_23650001 chr2R_23650001 RAL-383 1156 chr2R 23914278 23914331 chr2R 23921922 23921975 412 14 7636 2.0 4.0 3.0 3.5 7697 chr2R 23914278 exon kcc + chr2R 23918126 intron kcc + chr2R 23921975 exon kcc + chr2R_14_23915001 chr2R_23915001 RAL-383 1157 chr2R 23926813 23926861 chr2R 23926915 23926963 12 99 1.0 4.0 2.5 3.4 150 chr2R 23926813 3` UTR,3` UTR Ca-P60A -,CG2812 + chr2R 23926888 3` UTR,3` UTR Ca-P60A -,CG2812 + chr2R 23926963 3` UTR Ca-P60A - chr2R_12_23925001 chr2R_23925001 RAL-383 1158 chr2R 23986514 23986547 chr2R 23986614 23986647 13 100 0.5 4.0 2.2 4.1 133 chr2R 23986514 intron Phm - chr2R 23986580 intron Phm - chr2R 23986647 intron,5` UTR Phm -,CG30178 + chr2R_13_23985001 chr2R_23985001 RAL-383 1159 chr2R 24031364 24031405 chr2R 24031466 24031509 14 103 5.0 7.0 6.0 2.0 145 chr2R 24031364 5` UTR CG30172 - chr2R 24031436 intergenic CG30172 -,Chi - chr2R 24031509 intergenic Chi -,CG30172 - chr2R_14_24030001 chr2R_24030001 RAL-383 1160 chr2R 24177214 24177267 chr2R 24184719 24184755 412 9 7503 6.5 5.0 5.8 1.3 7541 chr2R 24177214 3` UTR Nop60B + chr2R 24180984 intron Nop60B + chr2R 24184755 3` UTR Nop60B + chr2R_9_24180001 chr2R_24180001 RAL-383 1161 chr2R 24353413 24353440 chr2R 24361795 24361802 roo 7 8377 5.5 10.5 8.0 0.8 8389 chr2R 24353413 intron,intron bs +,CR44811 - chr2R 24357608 intron,intron bs +,CR44811 - chr2R 24361802 intron,intron bs +,CR44811 - chr2R_7_24355001 chr2R_24355001 RAL-383 1162 chr2R 24430929 24430949 chr2R 24431017 24431054 12 104 0.0 5.0 2.5 3.4 125 chr2R 24430929 intergenic CG15873 -,Pgam5-2 - chr2R 24430992 intergenic CG15873 -,Pgam5-2 - chr2R 24431054 intergenic Pgam5-2 -,CG15873 - chr2R_12_24430001 chr2R_24430001 RAL-383 1163 chr2R 24493068 24493119 chr2R 24493177 24493225 10 107 0.0 5.0 2.5 2.9 157 chr2R 24493068 intergenic CG13590 -,CG13589 - chr2R 24493146 intergenic CG13590 -,CG13589 - chr2R 24493225 intergenic CG13590 -,CG13589 - chr2R_10_24490001 chr2R_24490001 RAL-383 1164 chr2R 24509294 24509340 chr2R 24509398 24509445 13 101 4.0 5.0 4.5 2.4 151 chr2R 24509294 intergenic Letm1 - chr2R 24509370 intergenic Letm1 - chr2R 24509445 intergenic Letm1 - chr2R_13_24505001 chr2R_24505001 RAL-383 1165 chr2R 24548904 24548947 chr2R 24549008 24549051 11 100 5.0 2.0 3.5 2.4 147 chr2R 24548904 intron,intron CG4622 -,ITP + chr2R 24548978 intron,intron CG4622 -,ITP + chr2R 24549051 intron,intron CG4622 -,ITP + chr2R_11_24545001 chr2R_24545001 RAL-383 1166 chr2R 24590075 24590145 chr2R 24590203 24590237 7 111 0.0 2.5 1.2 3.2 162 chr2R 24590075 intron pio + chr2R 24590156 intron pio + chr2R 24590237 intron pio + chr2R_7_24590001 chr2R_24590001 RAL-383 1167 chr2R 24636885 24636911 chr2R 24636991 24637017 13 105 8.0 0.0 4.0 2.6 132 chr2R 24636885 intron CG13594 - chr2R 24636951 intron CG13594 - chr2R 24637017 intron CG13594 - chr2R_13_24635001 chr2R_24635001 RAL-383 1168 chr2R 24647567 24647614 chr2R 24655158 24655191 412 6 7575 0.0 5.0 2.5 1.7 7624 chr2R 24647567 intergenic not near genes chr2R 24651379 intergenic not near genes chr2R 24655191 intergenic not near genes chr2R_6_24650001 chr2R_24650001 RAL-383 1169 chr2R 24687637 24687666 chr2R 24687720 24687765 13 93 4.5 2.0 3.2 3.1 128 chr2R 24687637 intergenic Mmp1 - chr2R 24687701 intergenic Mmp1 - chr2R 24687765 intergenic Mmp1 - chr2R_13_24685001 chr2R_24685001 RAL-383 1170 chr2R 24763600 24763640 chr2R 24765596 24765636 G2 7 1990 2.5 1.0 1.8 2.5 2036 chr2R 24763600 exon CG3894 + chr2R 24764618 intron CG3894 + chr2R 24765636 exon CG3894 + chr2R_7_24760001 chr2R_24760001 RAL-383 1171 chr2R 24813400 24813439 chr2R 24813513 24813547 5 114 3.0 1.0 2.0 1.7 147 chr2R 24813400 intergenic not near genes chr2R 24813474 intergenic not near genes chr2R 24813547 intergenic not near genes chr2R_5_24810001 chr2R_24810001 RAL-383 1172 chr2R 24856558 24856598 chr2R 24856938 24856948 11 374 4.0 1.5 2.8 2.9 390 chr2R 24856558 intergenic not near genes chr2R 24856753 intergenic not near genes chr2R 24856948 intergenic not near genes chr2R_11_24855001 chr2R_24855001 RAL-383 1173 chr2R 24859824 24859869 chr2R 24859930 24859964 11 98 1.5 3.0 2.2 3.4 140 chr2R 24859824 5` UTR CR44829 + chr2R 24859894 5` UTR CR44829 + chr2R 24859964 5` UTR CR44829 + chr2R_11_24855001 chr2R_24855001 RAL-383 1174 chr2R 24884036 24884079 chr2R 24884138 24884181 26 102 3.0 4.0 3.5 5.8 145 chr2R 24884036 intron NKAIN + chr2R 24884108 intron NKAIN + chr2R 24884181 intron NKAIN + chr2R_26_24880001 chr2R_24880001 RAL-383 1175 chr2R 25014528 25014575 chr2R 25014624 25014671 4 96 2.5 7.0 4.8 0.7 143 chr2R 25014528 intron uzip + chr2R 25014600 intron uzip + chr2R 25014671 intron uzip + chr2R_4_25010001 chr2R_25010001 RAL-383 1176 chr2R 25016552 25016602 chr2R 25016845 25016884 9 283 4.5 6.5 5.5 1.4 332 chr2R 25016552 intron uzip + chr2R 25016718 intron uzip + chr2R 25016884 intron uzip + chr2R_9_25015001 chr2R_25015001 RAL-383 1177 chr2R 25018324 25018354 chr2R 25018443 25018474 8 117 7.5 4.0 5.8 1.2 150 chr2R 25018324 intron uzip + chr2R 25018399 intron uzip + chr2R 25018474 intron uzip + chr2R_8_25015001 chr2R_25015001 RAL-383 1178 chr2R 25018356 25018373 chr2R 25018440 25018494 5 112 6.0 4.0 5.0 0.8 138 chr2R 25018356 intron uzip + chr2R 25018425 intron uzip + chr2R 25018494 intron uzip + chr2R_5_25015001 chr2R_25015001 RAL-383 1179 chr2R 25022621 25022669 chr2R 25022725 25022772 16 103 2.5 6.0 4.2 3.1 151 chr2R 25022621 intron uzip + chr2R 25022696 intron uzip + chr2R 25022772 intron uzip + chr2R_16_25020001 chr2R_25020001 RAL-383 1180 chr2R 25130990 25131041 chr2R 25131087 25131087 11 91 3.5 1.0 2.2 3.4 97 chr2R 25130990 intron lov - chr2R 25131038 intron lov - chr2R 25131087 intron lov - chr2R_11_25130001 chr2R_25130001 RAL-383 1181 chr2R 25141640 25141675 chr2R 25159350 25159385 roo 9 17707 3.0 4.0 3.5 2.0 17745 chr2R 25141640 intergenic not near genes chr2R 25150512 intergenic not near genes chr2R 25159385 intergenic not near genes chr2R_9_25150001 chr2R_25150001 RAL-383 1182 chr2R 25159359 25159405 chr2R 25159567 25159613 10 207 4.0 4.0 4.0 2.0 254 chr2R 25159359 intergenic not near genes chr2R 25159486 intergenic not near genes chr2R 25159613 intergenic not near genes chr2R_10_25155001 chr2R_25155001 RAL-383 1183 chr2R 25165371 25165408 chr2R 25165487 25165499 5 109 2.0 0.5 1.2 2.3 128 chr2R 25165371 intergenic not near genes chr2R 25165435 intergenic not near genes chr2R 25165499 intergenic not near genes chr2R_5_25165001 chr2R_25165001 RAL-383 1184 chr2R 25167665 25167700 chr2R 25167766 25167802 10 102 2.5 3.5 3.0 2.5 137 chr2R 25167665 5` UTR CG34038 + chr2R 25167734 5` UTR CG34038 + chr2R 25167802 5` UTR CG34038 + chr2R_10_25165001 chr2R_25165001 RAL-383 1185 chr2R 25213672 25213714 chr2R 25213772 25213792 13 94 5.0 6.5 5.8 1.9 120 chr2R 25213672 intron CG9380 - chr2R 25213732 intron CG9380 - chr2R 25213792 intron CG9380 - chr2R_13_25210001 chr2R_25210001 RAL-383 1186 chr2R 25224650 25224693 chr2R 25224746 25224789 7 96 3.0 3.0 3.0 1.8 139 chr2R 25224650 intron CG9380 - chr2R 25224720 intron CG9380 - chr2R 25224789 intron CG9380 - chr2R_7_25220001 chr2R_25220001 RAL-383 1187 chr3L 52892 52936 chr3L 52996 53024 7 101 2.0 5.0 3.5 1.6 132 chr3L 52892 intergenic not near genes chr3L 52958 intergenic not near genes chr3L 53024 intergenic not near genes chr3L_7_50001 chr3L_50001 RAL-383 1188 chr3L 68966 69015 chr3L 69073 69111 9 105 3.0 2.5 2.8 2.4 145 chr3L 68966 3` UTR Lsp1gamma + chr3L 69038 intergenic Lsp1gamma +,CR44510 + chr3L 69111 intergenic CR44510 +,Lsp1gamma + chr3L_9_65001 chr3L_65001 RAL-383 1189 chr3L 110191 110243 chr3L 119378 119421 roo 6 9185 4.5 4.0 4.2 1.2 9230 chr3L 110191 intergenic not near genes chr3L 114806 intergenic not near genes chr3L 119421 intergenic not near genes chr3L_6_110001 chr3L_110001 RAL-383 1190 chr3L 391899 391922 chr3L 392012 392035 6 113 0.0 3.0 1.5 2.4 136 chr3L 391899 intron trh - chr3L 391967 intron trh - chr3L 392035 intron,3` UTR trh -,CR45378 - chr3L_6_390001 chr3L_390001 RAL-383 1191 chr3L 402676 402712 chr3L 409749 409765 297 10 7066 3.5 6.0 4.8 1.7 7089 chr3L 402676 intergenic not near genes chr3L 406220 intergenic not near genes chr3L 409765 intergenic not near genes chr3L_10_405001 chr3L_405001 RAL-383 1192 chr3L 445529 445583 chr3L 445625 445682 8 96 1.0 1.0 1.0 4.0 153 chr3L 445529 exon klar - chr3L 445606 intron klar - chr3L 445682 intron klar - chr3L_8_445001 chr3L_445001 RAL-383 1193 chr3L 563952 564001 chr3L 564151 564200 25 196 8.5 6.5 7.5 2.9 248 chr3L 563952 intron hipk + chr3L 564076 intron hipk + chr3L 564200 intron hipk + chr3L_25_560001 chr3L_560001 RAL-383 1194 chr3L 561348 561390 chr3L 564781 564810 10 3423 25.5 39.0 32.2 0.3 3462 chr3L 561348 intron hipk + chr3L 563079 intron hipk + chr3L 564810 intron hipk + chr3L_10_560001 chr3L_560001 RAL-383 1195 chr3L 606872 606916 chr3L 606968 607015 10 96 6.5 0.0 3.2 2.4 143 chr3L 606872 intergenic Reg-2 - chr3L 606944 intergenic Reg-2 - chr3L 607015 intergenic Reg-2 - chr3L_10_605001 chr3L_605001 RAL-383 1196 chr3L 618427 618441 chr3L 618571 618586 5 145 4.0 5.0 4.5 0.9 159 chr3L 618427 intergenic not near genes chr3L 618506 intergenic not near genes chr3L 618586 intergenic not near genes chr3L_5_615001 chr3L_615001 RAL-383 1197 chr3L 642457 642498 chr3L 642568 642603 16 107 4.0 8.0 6.0 2.3 146 chr3L 642457 5` UTR CR43334 + chr3L 642530 5` UTR CR43334 + chr3L 642603 5` UTR CR43334 + chr3L_16_640001 chr3L_640001 RAL-383 1198 chr3L 732810 732845 chr3L 733050 733084 12 238 1.0 3.5 2.2 3.8 274 chr3L 732810 intergenic not near genes chr3L 732947 intergenic not near genes chr3L 733084 intergenic not near genes chr3L_12_730001 chr3L_730001 RAL-383 1199 chr3L 789899 789932 chr3L 790397 790428 roo 7 498 1.5 1.5 1.5 2.8 529 chr3L 789899 intergenic not near genes chr3L 790164 intergenic not near genes chr3L 790428 intergenic not near genes chr3L_7_790001 chr3L_790001 RAL-383 1200 chr3L 821058 821081 chr3L 821156 821164 13 96 3.5 2.5 3.0 3.2 106 chr3L 821058 5` UTR CR43883 + chr3L 821111 5` UTR CR43883 + chr3L 821164 5` UTR CR43883 + chr3L_13_820001 chr3L_820001 RAL-383 1201 chr3L 925160 925205 chr3L 932606 932651 mdg1 17 7443 2.5 4.0 3.2 4.0 7491 chr3L 925160 intron Glut1 + chr3L 928906 intron Glut1 + chr3L 932651 intron Glut1 + chr3L_17_925001 chr3L_925001 RAL-383 1202 chr3L 939763 939771 chr3L 940904 940912 jockey 5 1141 3.0 6.0 4.5 0.9 1149 chr3L 939763 intron Glut1 + chr3L 940338 intron Glut1 + chr3L 940912 intron Glut1 + chr3L_5_940001 chr3L_940001 RAL-383 1203 chr3L 939773 939789 chr3L 940899 940929 jockey 5 1138 2.5 5.5 4.0 1.0 1156 chr3L 939773 intron Glut1 + chr3L 940351 intron Glut1 + chr3L 940929 intron Glut1 + chr3L_5_940001 chr3L_940001 RAL-383 1204 chr3L 1022068 1022087 chr3L 1022139 1022175 5 87 1.0 2.5 1.8 1.8 107 chr3L 1022068 intron trio - chr3L 1022122 intron trio - chr3L 1022175 intron trio - chr3L_5_1020001 chr3L_1020001 RAL-383 1205 chr3L 1033319 1033347 chr3L 1033441 1033463 5 117 0.0 0.0 0.0 5.0 144 chr3L 1033319 intron trio - chr3L 1033391 intron trio - chr3L 1033463 intron trio - chr3L_5_1030001 chr3L_1030001 RAL-383 1206 chr3L 1040532 1040536 chr3L 1040636 1040639 4 103 5.0 3.5 4.2 0.8 107 chr3L 1040532 intron bab1 - chr3L 1040586 intron bab1 - chr3L 1040639 intron bab1 - chr3L_4_1040001 chr3L_1040001 RAL-383 1207 chr3L 1040539 1040583 chr3L 1040633 1040685 14 102 2.5 3.5 3.0 3.5 146 chr3L 1040539 intron bab1 - chr3L 1040612 intron bab1 - chr3L 1040685 intron bab1 - chr3L_14_1040001 chr3L_1040001 RAL-383 1208 chr3L 1047374 1047385 chr3L 1055170 1055192 412 6 7803 0.5 3.0 1.8 2.1 7818 chr3L 1047374 intron bab1 - chr3L 1051283 intron bab1 - chr3L 1055192 intron bab1 - chr3L_6_1050001 chr3L_1050001 RAL-383 1209 chr3L 1086471 1086494 chr3L 1086576 1086605 5 110 6.0 3.5 4.8 0.9 134 chr3L 1086471 intron bab1 - chr3L 1086538 intron bab1 - chr3L 1086605 intron bab1 - chr3L_5_1085001 chr3L_1085001 RAL-383 1210 chr3L 1154119 1154125 chr3L 1163289 1163295 roo 4 9170 7.0 5.5 6.2 0.6 9176 chr3L 1154119 intron bab2 - chr3L 1158707 intron bab2 - chr3L 1163295 intron bab2 - chr3L_4_1155001 chr3L_1155001 RAL-383 1211 chr3L 1154127 1154157 chr3L 1163280 1163292 roo 6 9161 2.5 5.0 3.8 1.2 9165 chr3L 1154127 intron bab2 - chr3L 1158710 intron bab2 - chr3L 1163292 intron bab2 - chr3L_6_1155001 chr3L_1155001 RAL-383 1212 chr3L 1219582 1219621 chr3L 1227335 1227374 412 9 7749 1.5 3.0 2.2 2.8 7792 chr3L 1219582 intron mwh + chr3L 1223478 intron mwh + chr3L 1227374 intron mwh + chr3L_9_1220001 chr3L_1220001 RAL-383 1213 chr3L 1260135 1260162 chr3L 1260235 1260262 7 100 1.5 3.0 2.2 2.2 127 chr3L 1260135 intron CG9134 + chr3L 1260198 intron CG9134 + chr3L 1260262 intron CG9134 + chr3L_7_1260001 chr3L_1260001 RAL-383 1214 chr3L 1269452 1269501 chr3L 1269790 1269829 8 330 3.0 1.0 2.0 2.7 377 chr3L 1269452 intron CG9134 + chr3L 1269640 intron CG9134 + chr3L 1269829 intron CG9134 + chr3L_8_1265001 chr3L_1265001 RAL-383 1215 chr3L 1350909 1350925 chr3L 1351021 1351037 6 111 7.0 4.5 5.8 0.9 128 chr3L 1350909 intron Ptp61F - chr3L 1350973 intron Ptp61F - chr3L 1351037 intron Ptp61F - chr3L_6_1350001 chr3L_1350001 RAL-383 1216 chr3L 1415753 1415797 chr3L 1415855 1415893 12 99 2.0 3.0 2.5 3.4 140 chr3L 1415753 intron Ptp61F - chr3L 1415823 intron Ptp61F - chr3L 1415893 intron Ptp61F - chr3L_12_1415001 chr3L_1415001 RAL-383 1217 chr3L 1424755 1424761 chr3L 1430027 1430033 Rt1a 6 5272 0.0 9.5 4.8 1.0 5278 chr3L 1424755 intron Ptp61F - chr3L 1427394 intron Ptp61F - chr3L 1430033 intron Ptp61F - chr3L_6_1425001 chr3L_1425001 RAL-383 1218 chr3L 1454225 1454262 chr3L 1454322 1454359 8 97 6.5 3.5 5.0 1.3 134 chr3L 1454225 intron Ptp61F - chr3L 1454292 intron Ptp61F - chr3L 1454359 intron Ptp61F - chr3L_8_1450001 chr3L_1450001 RAL-383 1219 chr3L 1505993 1506029 chr3L 1513600 1513645 17.6 11 7616 3.0 2.5 2.8 2.9 7652 chr3L 1505993 intron,intron Psa +,cue - chr3L 1509819 intron,intron Psa +,cue - chr3L 1513645 intron,intron Psa +,cue - chr3L_11_1505001 chr3L_1505001 RAL-383 1220 chr3L 1658823 1658861 chr3L 1658928 1658968 15 106 5.0 4.5 4.8 2.6 145 chr3L 1658823 intron CG7971 - chr3L 1658896 intron CG7971 - chr3L 1658968 intron CG7971 - chr3L_15_1655001 chr3L_1655001 RAL-383 1221 chr3L 1661552 1661589 chr3L 1661655 1661686 6 102 1.5 1.5 1.5 2.4 134 chr3L 1661552 exon CG7971 - chr3L 1661619 intron CG7971 - chr3L 1661686 intron CG7971 - chr3L_6_1660001 chr3L_1660001 RAL-383 1222 chr3L 1688226 1688269 chr3L 1688375 1688418 9 147 1.0 0.5 0.8 5.0 192 chr3L 1688226 intron CG7991 + chr3L 1688322 intron CG7991 + chr3L 1688418 intron CG7991 + chr3L_9_1685001 chr3L_1685001 RAL-383 1223 chr3L 1740832 1740882 chr3L 1741097 1741111 pogo 11 255 2.5 3.0 2.8 2.9 279 chr3L 1740832 intron Gk + chr3L 1740972 intron Gk + chr3L 1741111 intron Gk + chr3L_11_1740001 chr3L_1740001 RAL-383 1224 chr3L 1805677 1805712 chr3L 1805871 1805906 13 192 3.5 2.0 2.8 3.4 229 chr3L 1805677 exon CG42676 + chr3L 1805792 intron CG42676 + chr3L 1805906 intron CG42676 + chr3L_13_1805001 chr3L_1805001 RAL-383 1225 chr3L 1843988 1844032 chr3L 1844540 1844552 7 542 3.5 1.0 2.2 2.2 564 chr3L 1843988 intergenic not near genes chr3L 1844270 intergenic not near genes chr3L 1844552 intergenic not near genes chr3L_7_1840001 chr3L_1840001 RAL-383 1226 chr3L 1853031 1853053 chr3L 1853135 1853156 9 103 2.0 3.0 2.5 2.6 125 chr3L 1853031 intron CG13936 - chr3L 1853094 intron CG13936 - chr3L 1853156 intron CG13936 - chr3L_9_1850001 chr3L_1850001 RAL-383 1227 chr3L 2015756 2015772 chr3L 2015854 2015870 5 98 5.0 0.0 2.5 1.4 114 chr3L 2015756 intergenic not near genes chr3L 2015813 intergenic not near genes chr3L 2015870 intergenic not near genes chr3L_5_2015001 chr3L_2015001 RAL-383 1228 chr3L 2108236 2108280 chr3L 2113460 2113504 copia 12 5224 1.5 4.0 2.8 3.2 5268 chr3L 2108236 intron sls - chr3L 2110870 intron sls - chr3L 2113504 intron sls - chr3L_12_2110001 chr3L_2110001 RAL-383 1229 chr3L 2199790 2199818 chr3L 2199886 2199914 8 96 0.0 6.5 3.2 1.9 124 chr3L 2199790 intergenic not near genes chr3L 2199852 intergenic not near genes chr3L 2199914 intergenic not near genes chr3L_8_2195001 chr3L_2195001 RAL-383 1230 chr3L 2282970 2283019 chr3L 2283065 2283115 10 96 1.0 2.0 1.5 4.0 145 chr3L 2282970 5` UTR MsR2 + chr3L 2283042 5` UTR MsR2 + chr3L 2283115 5` UTR MsR2 + chr3L_10_2280001 chr3L_2280001 RAL-383 1231 chr3L 2285500 2285540 chr3L 2285600 2285640 7 100 1.5 0.5 1.0 3.5 140 chr3L 2285500 intron MsR2 + chr3L 2285570 intron MsR2 + chr3L 2285640 intron MsR2 + chr3L_7_2285001 chr3L_2285001 RAL-383 1232 chr3L 2294731 2294740 chr3L 2294854 2294867 9 127 1.5 9.5 5.5 1.4 136 chr3L 2294731 intron MsR2 + chr3L 2294799 intron MsR2 + chr3L 2294867 intron MsR2 + chr3L_9_2290001 chr3L_2290001 RAL-383 1233 chr3L 2307983 2308029 chr3L 2308108 2308155 13 124 6.0 4.5 5.2 2.1 172 chr3L 2307983 intergenic not near genes chr3L 2308069 intergenic not near genes chr3L 2308155 intergenic not near genes chr3L_13_2305001 chr3L_2305001 RAL-383 1234 chr3L 2321139 2321188 chr3L 2321236 2321251 10 93 2.0 3.0 2.5 2.9 112 chr3L 2321139 intergenic not near genes chr3L 2321195 intergenic not near genes chr3L 2321251 intergenic not near genes chr3L_10_2320001 chr3L_2320001 RAL-383 1235 chr3L 2447487 2447532 chr3L 2456663 2456677 roo 13 9168 5.0 4.0 4.5 2.4 9190 chr3L 2447487 intron CG45186 + chr3L 2452082 intron CG45186 + chr3L 2456677 intron CG45186 + chr3L_13_2450001 chr3L_2450001 RAL-383 1236 chr3L 2478876 2479027 chr3L 2478966 2479144 14 109 0.5 0.5 0.5 9.3 268 chr3L 2478876 intron CG45186 + chr3L 2479010 intron CG45186 + chr3L 2479144 intron CG45186 + chr3L_14_2475001 chr3L_2475001 RAL-383 1237 chr3L 2483135 2483171 chr3L 2483233 2483240 4 91 1.5 4.0 2.8 1.1 105 chr3L 2483135 intron CG45186 + chr3L 2483188 intron CG45186 + chr3L 2483240 intron CG45186 + chr3L_4_2480001 chr3L_2480001 RAL-383 1238 chr3L 2533661 2533677 chr3L 2533732 2533754 6 80 3.0 9.0 6.0 0.9 93 chr3L 2533661 intron Spn - chr3L 2533708 intron Spn - chr3L 2533754 intron Spn - chr3L_6_2530001 chr3L_2530001 RAL-383 1239 chr3L 2581890 2581911 chr3L 2581996 2582025 5 112 2.5 2.0 2.2 1.6 135 chr3L 2581890 intron msn - chr3L 2581958 intron msn - chr3L 2582025 intron msn - chr3L_5_2580001 chr3L_2580001 RAL-383 1240 chr3L 2674757 2674807 chr3L 2674858 2674908 10 96 1.5 2.0 1.8 3.6 151 chr3L 2674757 intron Fife - chr3L 2674832 intron Fife - chr3L 2674908 intron Fife - chr3L_10_2670001 chr3L_2670001 RAL-383 1241 chr3L 2680502 2680524 chr3L 2680602 2680618 4 98 9.0 0.0 4.5 0.7 116 chr3L 2680502 intron Fife - chr3L 2680560 intron Fife - chr3L 2680618 intron Fife - chr3L_4_2680001 chr3L_2680001 RAL-383 1242 chr3L 2683932 2683975 chr3L 2684022 2684071 15 93 4.5 3.5 4.0 3.0 139 chr3L 2683932 intron Fife - chr3L 2684002 intron Fife - chr3L 2684071 intron Fife - chr3L_15_2680001 chr3L_2680001 RAL-383 1243 chr3L 2719529 2719553 chr3L 2719651 2719668 5 121 4.0 4.5 4.2 1.0 139 chr3L 2719529 3` UTR Mrtf - chr3L 2719598 3` UTR Mrtf - chr3L 2719668 3` UTR Mrtf - chr3L_5_2715001 chr3L_2715001 RAL-383 1244 chr3L 2795713 2795748 chr3L 2795856 2795891 6 143 4.5 2.5 3.5 1.3 178 chr3L 2795713 intron CG43444 - chr3L 2795802 intron CG43444 - chr3L 2795891 intron CG43444 - chr3L_6_2795001 chr3L_2795001 RAL-383 1245 chr3L 2854468 2854493 chr3L 2854561 2854575 4 83 2.5 2.5 2.5 1.1 107 chr3L 2854468 intron CG43444 - chr3L 2854522 intron CG43444 - chr3L 2854575 intron CG43444 - chr3L_4_2850001 chr3L_2850001 RAL-383 1246 chr3L 2899574 2899604 chr3L 2899692 2899737 14 132 3.0 6.0 4.5 2.5 163 chr3L 2899574 intron Shab + chr3L 2899656 intron Shab + chr3L 2899737 intron Shab + chr3L_14_2895001 chr3L_2895001 RAL-383 1247 chr3L 2927838 2927865 chr3L 2936118 2936155 Tirant 6 8293 3.5 4.0 3.8 1.2 8317 chr3L 2927838 intron Shab + chr3L 2931996 intron Shab + chr3L 2936155 intron Shab + chr3L_6_2930001 chr3L_2930001 RAL-383 1248 chr3L 2987716 2987756 chr3L 2987998 2988038 6 280 5.0 4.0 4.5 1.1 322 chr3L 2987716 intergenic not near genes chr3L 2987877 intergenic not near genes chr3L 2988038 intergenic not near genes chr3L_6_2985001 chr3L_2985001 RAL-383 1249 chr3L 3028334 3028345 chr3L 3028430 3028440 6 97 7.5 4.5 6.0 0.9 106 chr3L 3028334 intergenic not near genes chr3L 3028387 intergenic not near genes chr3L 3028440 intergenic not near genes chr3L_6_3025001 chr3L_3025001 RAL-383 1250 chr3L 3028988 3029024 chr3L 3029094 3029130 4 106 1.5 0.0 0.8 2.2 142 chr3L 3028988 intergenic not near genes chr3L 3029059 intergenic not near genes chr3L 3029130 intergenic not near genes chr3L_4_3025001 chr3L_3025001 RAL-383 1251 chr3L 3030956 3030961 chr3L 3031056 3031061 4 100 0.5 0.0 0.2 3.3 105 chr3L 3030956 intergenic not near genes chr3L 3031008 intergenic not near genes chr3L 3031061 intergenic not near genes chr3L_4_3030001 chr3L_3030001 RAL-383 1252 chr3L 3040309 3040356 chr3L 3042118 3042165 S-element 8 1807 5.0 4.5 4.8 1.4 1856 chr3L 3040309 3` UTR CG2162 + chr3L 3041237 intergenic not near genes chr3L 3042165 intergenic Jafrac2 + chr3L_8_3040001 chr3L_3040001 RAL-383 1253 chr3L 3050877 3050930 chr3L 3050984 3051037 12 104 2.0 1.0 1.5 4.8 160 chr3L 3050877 intron CG32485 + chr3L 3050957 intron CG32485 + chr3L 3051037 exon CG32485 + chr3L_12_3050001 chr3L_3050001 RAL-383 1254 chr3L 3051723 3051750 chr3L 3051985 3052012 pogo 5 261 9.0 2.5 5.8 0.7 289 chr3L 3051723 3` UTR CG32485 + chr3L 3051868 intergenic CG32485 + chr3L 3052012 intergenic CG32485 + chr3L_5_3050001 chr3L_3050001 RAL-383 1255 chr3L 3193537 3193571 chr3L 3193637 3193668 9 99 2.5 1.0 1.8 3.2 131 chr3L 3193537 intron Hsp83 + chr3L 3193602 intron Hsp83 + chr3L 3193668 intron Hsp83 + chr3L_9_3190001 chr3L_3190001 RAL-383 1256 chr3L 3259821 3259828 chr3L 3259941 3259948 4 120 0.0 7.5 3.8 0.8 127 chr3L 3259821 intron ckd + chr3L 3259884 intron ckd + chr3L 3259948 intron ckd + chr3L_4_3255001 chr3L_3255001 RAL-383 1257 chr3L 3431924 3431970 chr3L 3432041 3432086 6 110 2.5 2.5 2.5 1.7 162 chr3L 3431924 intron eIF5B - chr3L 3432005 intron eIF5B - chr3L 3432086 intron eIF5B - chr3L_6_3430001 chr3L_3430001 RAL-383 1258 chr3L 3436270 3436311 chr3L 3436369 3436410 15 99 4.5 5.5 5.0 2.5 140 chr3L 3436270 intron eIF5B - chr3L 3436340 intron eIF5B - chr3L 3436410 intron eIF5B - chr3L_15_3435001 chr3L_3435001 RAL-383 1259 chr3L 3475092 3475097 chr3L 3475556 3475561 jockey 5 464 2.0 7.0 4.5 0.9 469 chr3L 3475092 intron CG42324 + chr3L 3475326 intron CG42324 + chr3L 3475561 intron CG42324 + chr3L_5_3475001 chr3L_3475001 RAL-383 1260 chr3L 3494176 3494200 chr3L 3494273 3494297 7 96 3.5 2.5 3.0 1.8 121 chr3L 3494176 intron CG42324 + chr3L 3494236 intron CG42324 + chr3L 3494297 intron CG42324 + chr3L_7_3490001 chr3L_3490001 RAL-383 1261 chr3L 3494751 3494766 chr3L 3494849 3494864 6 96 5.5 6.5 6.0 0.9 113 chr3L 3494751 intron CG42324 + chr3L 3494808 intron CG42324 + chr3L 3494864 intron CG42324 + chr3L_6_3490001 chr3L_3490001 RAL-383 1262 chr3L 3494771 3494781 chr3L 3494834 3494854 4 71 4.0 6.5 5.2 0.6 83 chr3L 3494771 intron CG42324 + chr3L 3494812 intron CG42324 + chr3L 3494854 intron CG42324 + chr3L_4_3490001 chr3L_3490001 RAL-383 1263 chr3L 3512942 3512975 chr3L 3513042 3513075 8 100 4.5 4.5 4.5 1.5 133 chr3L 3512942 intergenic ImpE2 - chr3L 3513008 intergenic ImpE2 - chr3L 3513075 intergenic ImpE2 - chr3L_8_3510001 chr3L_3510001 RAL-383 1264 chr3L 3539966 3539991 chr3L 3540075 3540084 5 106 1.5 2.5 2.0 1.7 118 chr3L 3539966 intron Eip63E + chr3L 3540025 intron Eip63E + chr3L 3540084 intron Eip63E + chr3L_5_3540001 chr3L_3540001 RAL-383 1265 chr3L 3573153 3573193 chr3L 3573256 3573296 15 102 2.5 1.5 2.0 5.0 143 chr3L 3573153 intron Eip63E + chr3L 3573224 intron Eip63E + chr3L 3573296 intron Eip63E + chr3L_15_3570001 chr3L_3570001 RAL-383 1266 chr3L 3601280 3601329 chr3L 3606611 3606613 copia 12 5325 3.5 4.5 4.0 2.4 5333 chr3L 3601280 intron Eip63E + chr3L 3603946 intron Eip63E + chr3L 3606613 intron Eip63E + chr3L_12_3600001 chr3L_3600001 RAL-383 1267 chr3L 3619399 3619432 chr3L 3619505 3619546 13 112 2.5 6.0 4.2 2.5 147 chr3L 3619399 intergenic not near genes chr3L 3619472 intergenic not near genes chr3L 3619546 intergenic not near genes chr3L_13_3615001 chr3L_3615001 RAL-383 1268 chr3L 3627221 3627263 chr3L 3627346 3627388 14 125 1.0 6.0 3.5 3.1 167 chr3L 3627221 intron dar1 + chr3L 3627304 intron dar1 + chr3L 3627388 intron dar1 + chr3L_14_3625001 chr3L_3625001 RAL-383 1269 chr3L 3683699 3683732 chr3L 3683788 3683809 8 90 2.0 3.0 2.5 2.3 110 chr3L 3683699 intergenic not near genes chr3L 3683754 intergenic not near genes chr3L 3683809 intergenic not near genes chr3L_8_3680001 chr3L_3680001 RAL-383 1270 chr3L 3763741 3763758 chr3L 3763842 3763855 4 99 3.0 0.0 1.5 1.6 114 chr3L 3763741 intron CG32264 - chr3L 3763798 intron CG32264 - chr3L 3763855 intron CG32264 - chr3L_4_3760001 chr3L_3760001 RAL-383 1271 chr3L 3772446 3772477 chr3L 3772536 3772564 11 94 3.0 5.0 4.0 2.2 118 chr3L 3772446 intron CG32264 - chr3L 3772505 intron CG32264 - chr3L 3772564 intron CG32264 - chr3L_11_3770001 chr3L_3770001 RAL-383 1272 chr3L 3783254 3783268 chr3L 3783351 3783364 5 97 4.5 2.0 3.2 1.2 110 chr3L 3783254 intron CG32264 - chr3L 3783309 intron CG32264 - chr3L 3783364 intron CG32264 - chr3L_5_3780001 chr3L_3780001 RAL-383 1273 chr3L 3795578 3795625 chr3L 3795675 3795722 15 97 2.0 3.5 2.8 3.9 144 chr3L 3795578 intron CG32264 - chr3L 3795650 intron CG32264 - chr3L 3795722 intron CG32264 - chr3L_15_3795001 chr3L_3795001 RAL-383 1274 chr3L 3796383 3796424 chr3L 3796732 3796773 9 349 2.5 3.5 3.0 2.2 390 chr3L 3796383 intron CG32264 - chr3L 3796578 intron CG32264 - chr3L 3796773 intron CG32264 - chr3L_9_3795001 chr3L_3795001 RAL-383 1275 chr3L 3797231 3797262 chr3L 3797325 3797365 12 101 0.0 2.0 1.0 6.0 134 chr3L 3797231 intron CG32264 - chr3L 3797298 intron CG32264 - chr3L 3797365 intron CG32264 - chr3L_12_3795001 chr3L_3795001 RAL-383 1276 chr3L 3815041 3815079 chr3L 3815132 3815180 18 99 2.5 6.5 4.5 3.3 139 chr3L 3815041 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815110 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815180 intron,intron Scsalpha +,CR43932 - chr3L_18_3815001 chr3L_3815001 RAL-383 1277 chr3L 3833718 3833754 chr3L 3833979 3834015 pogo 10 261 3.5 1.5 2.5 2.9 297 chr3L 3833718 intron enc + chr3L 3833866 intron enc + chr3L 3834015 intron enc + chr3L_10_3830001 chr3L_3830001 RAL-383 1278 chr3L 3890943 3890987 chr3L 3891044 3891087 6 98 2.5 0.0 1.2 2.7 144 chr3L 3890943 intergenic not near genes chr3L 3891015 intergenic not near genes chr3L 3891087 intergenic not near genes chr3L_6_3890001 chr3L_3890001 RAL-383 1279 chr3L 3926879 3926924 chr3L 3926982 3927002 9 99 1.5 3.5 2.5 2.6 123 chr3L 3926879 intron Eip63F-1 - chr3L 3926940 intron Eip63F-1 - chr3L 3927002 intron Eip63F-1 - chr3L_9_3925001 chr3L_3925001 RAL-383 1280 chr3L 3951347 3951376 chr3L 3951715 3951740 8 364 4.0 3.5 3.8 1.7 393 chr3L 3951347 3` UTR CG14984 - chr3L 3951544 intron CG14984 - chr3L 3951740 intron CG14984 - chr3L_8_3950001 chr3L_3950001 RAL-383 1281 chr3L 4015715 4015753 chr3L 4015818 4015856 11 103 3.5 2.0 2.8 2.9 141 chr3L 4015715 intergenic not near genes chr3L 4015786 intergenic not near genes chr3L 4015856 intergenic not near genes chr3L_11_4015001 chr3L_4015001 RAL-383 1282 chr3L 4064231 4064279 chr3L 4064325 4064377 10 93 2.5 4.5 3.5 2.2 146 chr3L 4064231 3` UTR,3` UTR dib +,wit - chr3L 4064304 3` UTR,3` UTR dib +,wit - chr3L 4064377 3` UTR,3` UTR dib +,wit - chr3L_10_4060001 chr3L_4060001 RAL-383 1283 chr3L 4091906 4091924 chr3L 4091991 4092024 5 95 4.5 4.0 4.2 1.0 118 chr3L 4091906 3` UTR CG14989 + chr3L 4091965 3` UTR CG14989 + chr3L 4092024 3` UTR CG14989 + chr3L_5_4090001 chr3L_4090001 RAL-383 1284 chr3L 4179175 4179210 chr3L 4179287 4179324 16 115 1.5 4.5 3.0 4.0 149 chr3L 4179175 intron CG18675 + chr3L 4179250 intron CG18675 + chr3L 4179324 intron CG18675 + chr3L_16_4175001 chr3L_4175001 RAL-383 1285 chr3L 4195128 4195172 chr3L 4195252 4195296 10 120 2.0 6.5 4.2 1.9 168 chr3L 4195128 exon CG43367 + chr3L 4195212 intron CG43367 + chr3L 4195296 intron CG43367 + chr3L_10_4195001 chr3L_4195001 RAL-383 1286 chr3L 4229745 4229764 chr3L 4229834 4229869 5 94 2.5 2.5 2.5 1.4 124 chr3L 4229745 intron ImpL2 - chr3L 4229807 intron ImpL2 - chr3L 4229869 intron ImpL2 - chr3L_5_4225001 chr3L_4225001 RAL-383 1287 chr3L 4337473 4337592 chr3L 4337586 4337721 14 126 2.5 5.0 3.8 2.9 248 chr3L 4337473 intron Cip4 - chr3L 4337597 intron Cip4 - chr3L 4337721 intron Cip4 - chr3L_14_4335001 chr3L_4335001 RAL-383 1288 chr3L 4341330 4341335 chr3L 21448026 21448026 13 17106694 17.0 17.5 17.2 0.7 17106696 chr3L 4341330 intron Cip4 - chr3L 12894678 3` UTR CG14118 + chr3L 21448026 3` UTR Syx7 + chr3L_13_12890001 chr3L_12890001 RAL-383 1289 chr3L 4344873 4344884 chr3L 4345000 4345011 6 127 9.0 0.0 4.5 1.1 138 chr3L 4344873 intron Cip4 - chr3L 4344942 intron Cip4 - chr3L 4345011 intron Cip4 - chr3L_6_4340001 chr3L_4340001 RAL-383 1290 chr3L 4607246 4607291 chr3L 4607356 4607398 6 110 1.5 7.5 4.5 1.1 152 chr3L 4607246 intron Src64B - chr3L 4607322 intron Src64B - chr3L 4607398 intron Src64B - chr3L_6_4605001 chr3L_4605001 RAL-383 1291 chr3L 4754926 4754967 chr3L 4755011 4755028 12 95 2.5 3.0 2.8 3.2 102 chr3L 4754926 intron RhoGEF64C + chr3L 4754977 intron RhoGEF64C + chr3L 4755028 intron RhoGEF64C + chr3L_12_4750001 chr3L_4750001 RAL-383 1292 chr3L 4858288 4858314 chr3L 4858398 4858424 6 110 4.0 4.0 4.0 1.2 136 chr3L 4858288 intergenic not near genes chr3L 4858356 intergenic not near genes chr3L 4858424 intergenic not near genes chr3L_6_4855001 chr3L_4855001 RAL-383 1293 chr3L 4858316 4858334 chr3L 4858397 4858444 5 104 1.5 4.0 2.8 1.3 128 chr3L 4858316 intergenic not near genes chr3L 4858380 intergenic not near genes chr3L 4858444 intergenic not near genes chr3L_5_4855001 chr3L_4855001 RAL-383 1294 chr3L 4864451 4864471 chr3L 4864697 4864726 7 251 6.0 5.0 5.5 1.1 275 chr3L 4864451 intron CG17150 + chr3L 4864588 intron CG17150 + chr3L 4864726 intron CG17150 + chr3L_7_4860001 chr3L_4860001 RAL-383 1295 chr3L 4901113 4901153 chr3L 4907323 4907334 diver 8 6202 1.5 3.5 2.5 2.3 6221 chr3L 4901113 intergenic CG13704 + chr3L 4904224 intergenic not near genes chr3L 4907334 intergenic not near genes chr3L_8_4900001 chr3L_4900001 RAL-383 1296 chr3L 4927535 4927585 chr3L 4927766 4927811 11 227 3.0 4.0 3.5 2.4 276 chr3L 4927535 intergenic not near genes chr3L 4927673 intergenic not near genes chr3L 4927811 intergenic not near genes chr3L_11_4925001 chr3L_4925001 RAL-383 1297 chr3L 4989181 4989191 chr3L 4989274 4989301 5 107 0.0 0.0 0.0 5.0 120 chr3L 4989181 intron Con - chr3L 4989241 intron Con - chr3L 4989301 intron Con - chr3L_5_4985001 chr3L_4985001 RAL-383 1298 chr3L 4991369 4991420 chr3L 4991513 4991564 12 143 2.0 3.5 2.8 3.2 195 chr3L 4991369 intron Con - chr3L 4991466 intron Con - chr3L 4991564 intron Con - chr3L_12_4990001 chr3L_4990001 RAL-383 1299 chr3L 5034170 5034192 chr3L 5043321 5043333 roo 6 9160 3.5 2.0 2.8 1.6 9163 chr3L 5034170 intron Con - chr3L 5038752 intron Con - chr3L 5043333 intron Con - chr3L_6_5035001 chr3L_5035001 RAL-383 1300 chr3L 5045440 5045478 chr3L 5050241 5050279 Doc 7 4800 6.0 5.0 5.5 1.1 4839 chr3L 5045440 intron Con - chr3L 5047860 intron Con - chr3L 5050279 intron Con - chr3L_7_5045001 chr3L_5045001 RAL-383 1301 chr3L 5101187 5101230 chr3L 5101286 5101330 14 99 2.0 6.0 4.0 2.8 143 chr3L 5101187 intergenic not near genes chr3L 5101258 intergenic not near genes chr3L 5101330 intergenic not near genes chr3L_14_5100001 chr3L_5100001 RAL-383 1302 chr3L 5103597 5103611 chr3L 5103696 5103711 7 100 8.5 0.0 4.2 1.3 114 chr3L 5103597 intergenic not near genes chr3L 5103654 intergenic not near genes chr3L 5103711 intergenic not near genes chr3L_7_5100001 chr3L_5100001 RAL-383 1303 chr3L 5104467 5104506 chr3L 5124621 5124660 17 20154 4.5 5.0 4.8 2.9 20193 chr3L 5104467 intergenic not near genes chr3L 5114564 intergenic not near genes chr3L 5124660 intergenic not near genes chr3L_17_5110001 chr3L_5110001 RAL-383 1304 chr3L 5136672 5136704 chr3L 5136753 5136801 4 93 1.5 0.5 1.0 2.0 129 chr3L 5136672 exon CG4611 + chr3L 5136736 exon CG4611 + chr3L 5136801 exon CG4611 + chr3L_4_5135001 chr3L_5135001 RAL-383 1305 chr3L 5172402 5172419 chr3L 5172976 5172993 7 574 5.0 4.5 4.8 1.2 591 chr3L 5172402 intron shep - chr3L 5172698 intron shep - chr3L 5172993 intron shep - chr3L_7_5170001 chr3L_5170001 RAL-383 1306 chr3L 5196948 5197195 chr3L 5197049 5197339 4 112 0.0 2.5 1.2 1.8 391 chr3L 5196948 intron shep - chr3L 5197144 intron shep - chr3L 5197339 intron shep - chr3L_4_5195001 chr3L_5195001 RAL-383 1307 chr3L 5223402 5223442 chr3L 5223500 5223520 4 88 2.0 1.5 1.8 1.4 118 chr3L 5223402 intron shep - chr3L 5223461 intron shep - chr3L 5223520 intron shep - chr3L_4_5220001 chr3L_5220001 RAL-383 1308 chr3L 5261157 5261173 chr3L 5261256 5261272 8 99 6.0 2.5 4.2 1.5 115 chr3L 5261157 intron shep - chr3L 5261214 intron shep - chr3L 5261272 intron shep - chr3L_8_5260001 chr3L_5260001 RAL-383 1309 chr3L 5271170 5271197 chr3L 5271268 5271295 4 98 0.0 0.0 0.0 4.0 125 chr3L 5271170 intron shep - chr3L 5271232 intron shep - chr3L 5271295 intron shep - chr3L_4_5270001 chr3L_5270001 RAL-383 1310 chr3L 5292264 5292295 chr3L 5292370 5292401 6 106 3.5 3.0 3.2 1.4 137 chr3L 5292264 intergenic not near genes chr3L 5292332 intergenic not near genes chr3L 5292401 intergenic not near genes chr3L_6_5290001 chr3L_5290001 RAL-383 1311 chr3L 5299157 5299169 chr3L 5306603 5306615 Quasimodo 6 7446 1.5 0.0 0.8 3.3 7458 chr3L 5299157 intergenic not near genes chr3L 5302886 intergenic not near genes chr3L 5306615 intergenic not near genes chr3L_6_5300001 chr3L_5300001 RAL-383 1312 chr3L 5306655 5306666 chr3L 5306765 5306776 4 110 0.0 2.5 1.2 1.8 121 chr3L 5306655 intergenic not near genes chr3L 5306716 intergenic not near genes chr3L 5306776 intergenic not near genes chr3L_4_5305001 chr3L_5305001 RAL-383 1313 chr3L 5351091 5351135 chr3L 5351196 5351240 12 104 2.0 4.5 3.2 2.9 149 chr3L 5351091 intron lama - chr3L 5351166 intron lama - chr3L 5351240 intron lama - chr3L_12_5350001 chr3L_5350001 RAL-383 1314 chr3L 5390943 5390989 chr3L 5391057 5391103 13 113 4.5 3.0 3.8 2.7 160 chr3L 5390943 intergenic not near genes chr3L 5391023 intergenic not near genes chr3L 5391103 intergenic not near genes chr3L_13_5390001 chr3L_5390001 RAL-383 1315 chr3L 5396472 5396498 chr3L 5396579 5396605 4 107 0.0 0.0 0.0 4.0 133 chr3L 5396472 intergenic not near genes chr3L 5396538 intergenic not near genes chr3L 5396605 intergenic not near genes chr3L_4_5395001 chr3L_5395001 RAL-383 1316 chr3L 5449513 5449562 chr3L 5449612 5449661 10 97 2.0 3.0 2.5 2.9 148 chr3L 5449513 intergenic not near genes chr3L 5449587 intergenic not near genes chr3L 5449661 intergenic not near genes chr3L_10_5445001 chr3L_5445001 RAL-383 1317 chr3L 5482938 5483089 chr3L 5483154 5483207 13 158 0.0 1.0 0.5 8.7 269 chr3L 5482938 exon CG4835 + chr3L 5483072 exon CG4835 + chr3L 5483207 exon CG4835 + chr3L_13_5480001 chr3L_5480001 RAL-383 1318 chr3L 5493179 5493184 chr3L 5493345 5493350 5 166 5.5 3.0 4.2 1.0 171 chr3L 5493179 intergenic CR44520 - chr3L 5493264 intergenic CR44520 - chr3L 5493350 intergenic CR44520 - chr3L_5_5490001 chr3L_5490001 RAL-383 1319 chr3L 5493189 5493220 chr3L 5493340 5493380 10 161 2.5 1.5 2.0 3.3 191 chr3L 5493189 intergenic CR44520 - chr3L 5493284 intergenic CR44520 - chr3L 5493380 intergenic CR44520 - chr3L_10_5490001 chr3L_5490001 RAL-383 1320 chr3L 5537725 5537749 chr3L 5538065 5538098 jockey 6 355 3.0 3.0 3.0 1.5 373 chr3L 5537725 intergenic not near genes chr3L 5537912 intergenic CG10625 - chr3L 5538098 intergenic CG10625 - chr3L_6_5535001 chr3L_5535001 RAL-383 1321 chr3L 5613541 5613548 chr3L 15588492 15588499 5 9974951 20.0 5.0 12.5 0.4 9974958 chr3L 5613541 intergenic not near genes chr3L 10601020 intergenic not near genes chr3L 15588499 intergenic RhoGAP71E + chr3L_5_10600001 chr3L_10600001 RAL-383 1322 chr3L 5624777 5624818 chr3L 5624930 5624979 14 159 3.5 2.0 2.8 3.7 202 chr3L 5624777 intergenic not near genes chr3L 5624878 intergenic not near genes chr3L 5624979 intergenic not near genes chr3L_14_5620001 chr3L_5620001 RAL-383 1323 chr3L 5677170 5677198 chr3L 5677266 5677294 5 95 0.0 5.0 2.5 1.4 124 chr3L 5677170 intron sif + chr3L 5677232 intron sif + chr3L 5677294 intron sif + chr3L_5_5675001 chr3L_5675001 RAL-383 1324 chr3L 5908060 5908107 chr3L 5908160 5908207 11 100 0.0 2.5 1.2 5.0 147 chr3L 5908060 intron CG13288 + chr3L 5908134 intron CG13288 + chr3L 5908207 intron CG13288 + chr3L_11_5905001 chr3L_5905001 RAL-383 1325 chr3L 5910011 5910026 chr3L 5910272 5910287 pogo 6 261 11.0 0.0 5.5 0.9 276 chr3L 5910011 intron CG13288 + chr3L 5910149 intron CG13288 + chr3L 5910287 intron CG13288 + chr3L_6_5910001 chr3L_5910001 RAL-383 1326 chr3L 5926313 5926347 chr3L 5926511 5926546 BS 6 204 3.5 5.5 4.5 1.1 233 chr3L 5926313 intron Vap-33B + chr3L 5926430 intron Vap-33B + chr3L 5926546 intron Vap-33B + chr3L_6_5925001 chr3L_5925001 RAL-383 1327 chr3L 5957557 5957604 chr3L 5957654 5957670 14 92 2.0 2.0 2.0 4.7 113 chr3L 5957557 intergenic not near genes chr3L 5957614 intergenic not near genes chr3L 5957670 intergenic not near genes chr3L_14_5955001 chr3L_5955001 RAL-383 1328 chr3L 6001668 6001717 chr3L 6004388 6004437 jockey 11 2718 4.0 2.5 3.2 2.6 2769 chr3L 6001668 intron PVRAP + chr3L 6003052 intron PVRAP + chr3L 6004437 intron PVRAP + chr3L_11_6000001 chr3L_6000001 RAL-383 1329 chr3L 6040355 6040393 chr3L 6042726 6042769 Doc 11 2376 2.5 4.5 3.5 2.4 2414 chr3L 6040355 intergenic Jon65Aiv + chr3L 6041562 intergenic not near genes chr3L 6042769 intergenic not near genes chr3L_11_6040001 chr3L_6040001 RAL-383 1330 chr3L 6052647 6052664 chr3L 6052745 6052753 4 98 5.0 5.5 5.2 0.6 106 chr3L 6052647 exon Jon65Aii + chr3L 6052700 intron Jon65Aii + chr3L 6052753 exon Jon65Aii + chr3L_4_6050001 chr3L_6050001 RAL-383 1331 chr3L 6119127 6119156 chr3L 6119224 6119253 4 97 1.5 0.0 0.8 2.2 126 chr3L 6119127 exon Ets65A + chr3L 6119190 intron Ets65A + chr3L 6119253 intron Ets65A + chr3L_4_6115001 chr3L_6115001 RAL-383 1332 chr3L 6155676 6155712 chr3L 6155782 6155818 9 106 5.0 3.5 4.2 1.7 142 chr3L 6155676 intergenic CR45421 - chr3L 6155747 intergenic not near genes chr3L 6155818 intergenic not near genes chr3L_9_6155001 chr3L_6155001 RAL-383 1333 chr3L 6159921 6159935 chr3L 6160021 6160035 7 100 8.5 0.0 4.2 1.3 114 chr3L 6159921 intergenic not near genes chr3L 6159978 intergenic not near genes chr3L 6160035 intergenic not near genes chr3L_7_6155001 chr3L_6155001 RAL-383 1334 chr3L 6185589 6185633 chr3L 6185687 6185731 14 97 6.5 3.5 5.0 2.3 142 chr3L 6185589 exon CG43293 + chr3L 6185660 intron CG43293 + chr3L 6185731 exon CG43293 + chr3L_14_6185001 chr3L_6185001 RAL-383 1335 chr3L 6220899 6220946 chr3L 6230066 6230118 roo 14 9170 5.5 3.5 4.5 2.5 9219 chr3L 6220899 5` UTR pncr008:3L + chr3L 6225508 intergenic not near genes chr3L 6230118 intergenic not near genes chr3L_14_6225001 chr3L_6225001 RAL-383 1336 chr3L 6278193 6278242 chr3L 6278289 6278338 6 85 3.5 0.0 1.8 2.1 145 chr3L 6278193 intergenic not near genes chr3L 6278266 intergenic not near genes chr3L 6278338 intergenic not near genes chr3L_6_6275001 chr3L_6275001 RAL-383 1337 chr3L 6335006 6335039 chr3L 6335497 6335530 297 6 489 1.5 4.0 2.8 1.6 524 chr3L 6335006 intron CG13300 - chr3L 6335268 intron CG13300 - chr3L 6335530 intron CG13300 - chr3L_6_6335001 chr3L_6335001 RAL-383 1338 chr3L 6405647 6405684 chr3L 6432131 6432168 roo 6 26484 6.5 4.0 5.2 1.0 26521 chr3L 6405647 intron CG42747 + chr3L 6418908 intron CG42747 + chr3L 6432168 intron CG42747 + chr3L_6_6415001 chr3L_6415001 RAL-383 1339 chr3L 6462968 6462997 chr3L 6463069 6463098 11 100 4.0 0.5 2.2 3.4 130 chr3L 6462968 intron CG42747 + chr3L 6463033 intron CG42747 + chr3L 6463098 intron CG42747 + chr3L_11_6460001 chr3L_6460001 RAL-383 1340 chr3L 6472817 6472862 chr3L 6472924 6472970 6 108 2.5 2.0 2.2 1.9 153 chr3L 6472817 intron CG42747 + chr3L 6472894 intron CG42747 + chr3L 6472970 intron CG42747 + chr3L_6_6470001 chr3L_6470001 RAL-383 1341 chr3L 6652060 6652108 chr3L 6652158 6652206 21 98 3.5 5.0 4.2 4.0 146 chr3L 6652060 intergenic not near genes chr3L 6652133 intergenic not near genes chr3L 6652206 intergenic not near genes chr3L_21_6650001 chr3L_6650001 RAL-383 1342 chr3L 6781106 6781152 chr3L 6783139 6783182 Doc 6 2032 5.5 0.0 2.8 1.6 2076 chr3L 6781106 intergenic not near genes chr3L 6782144 intergenic not near genes chr3L 6783182 intergenic not near genes chr3L_6_6780001 chr3L_6780001 RAL-383 1343 chr3L 6786870 6786920 chr3L 6786983 6787033 18 109 1.5 2.5 2.0 6.0 163 chr3L 6786870 3` UTR CR45759 - chr3L 6786952 3` UTR CR45759 - chr3L 6787033 3` UTR CR45759 - chr3L_18_6785001 chr3L_6785001 RAL-383 1344 chr3L 6835910 6835921 chr3L 6836008 6836019 8 98 1.5 3.5 2.5 2.3 109 chr3L 6835910 intergenic not near genes chr3L 6835964 intergenic not near genes chr3L 6836019 intergenic not near genes chr3L_8_6835001 chr3L_6835001 RAL-383 1345 chr3L 6844355 6844389 chr3L 6844521 6844555 11 166 2.0 7.0 4.5 2.0 200 chr3L 6844355 intergenic not near genes chr3L 6844455 intergenic not near genes chr3L 6844555 intergenic not near genes chr3L_11_6840001 chr3L_6840001 RAL-383 1346 chr3L 6849031 6849083 chr3L 6849238 6849256 23 197 0.5 4.0 2.2 7.2 225 chr3L 6849031 intergenic not near genes chr3L 6849144 intergenic not near genes chr3L 6849256 intergenic not near genes chr3L_23_6845001 chr3L_6845001 RAL-383 1347 chr3L 6855915 6855948 chr3L 6860718 6860746 Doc 5 4802 6.5 2.5 4.5 0.9 4831 chr3L 6855915 intergenic not near genes chr3L 6858330 intergenic not near genes chr3L 6860746 intergenic not near genes chr3L_5_6855001 chr3L_6855001 RAL-383 1348 chr3L 6887505 6887551 chr3L 6895017 6895053 roo 15 7506 3.0 8.0 5.5 2.3 7548 chr3L 6887505 intergenic not near genes chr3L 6891279 intergenic not near genes chr3L 6895053 intergenic not near genes chr3L_15_6890001 chr3L_6890001 RAL-383 1349 chr3L 6934316 6934359 chr3L 6934447 6934490 10 131 3.5 4.0 3.8 2.1 174 chr3L 6934316 exon CG14820 + chr3L 6934403 intron CG14820 + chr3L 6934490 exon CG14820 + chr3L_10_6930001 chr3L_6930001 RAL-383 1350 chr3L 6968361 6968402 chr3L 6968456 6968499 19 95 2.0 2.0 2.0 6.3 138 chr3L 6968361 exon Mis12 - chr3L 6968430 intron Mis12 - chr3L 6968499 intron Mis12 - chr3L_19_6965001 chr3L_6965001 RAL-383 1351 chr3L 6974484 6974516 chr3L 6974605 6974617 5 117 1.0 5.5 3.2 1.2 133 chr3L 6974484 intron Galphai - chr3L 6974550 intron Galphai - chr3L 6974617 intron Galphai - chr3L_5_6970001 chr3L_6970001 RAL-383 1352 chr3L 6994893 6994909 chr3L 6995523 6995539 BS 4 629 0.0 2.5 1.2 1.8 646 chr3L 6994893 intergenic bin + chr3L 6995216 intergenic not near genes chr3L 6995539 intergenic not near genes chr3L_4_6995001 chr3L_6995001 RAL-383 1353 chr3L 7033154 7033181 chr3L 7033254 7033280 6 94 5.5 4.0 4.8 1.0 126 chr3L 7033154 intron Mp + chr3L 7033217 intron Mp + chr3L 7033280 intron Mp + chr3L_6_7030001 chr3L_7030001 RAL-383 1354 chr3L 7090006 7090052 chr3L 7090104 7090153 15 99 3.5 3.5 3.5 3.3 147 chr3L 7090006 intergenic not near genes chr3L 7090080 intergenic not near genes chr3L 7090153 intergenic not near genes chr3L_15_7090001 chr3L_7090001 RAL-383 1355 chr3L 7130137 7130147 chr3L 7130262 7130272 7 125 2.5 8.0 5.2 1.1 135 chr3L 7130137 intergenic CG15829 + chr3L 7130204 intergenic not near genes chr3L 7130272 intergenic not near genes chr3L_7_7130001 chr3L_7130001 RAL-383 1356 chr3L 7175019 7175059 chr3L 7175269 7175309 14 249 4.5 5.0 4.8 2.4 290 chr3L 7175019 intron Dscam2 - chr3L 7175164 intron Dscam2 - chr3L 7175309 intron Dscam2 - chr3L_14_7175001 chr3L_7175001 RAL-383 1357 chr3L 7187394 7187418 chr3L 7187496 7187520 4 102 0.0 0.5 0.2 3.3 126 chr3L 7187394 intron Dscam2 - chr3L 7187457 intron Dscam2 - chr3L 7187520 intron Dscam2 - chr3L_4_7185001 chr3L_7185001 RAL-383 1358 chr3L 7190370 7190396 chr3L 7190874 7190885 4 496 9.5 0.5 5.0 0.7 515 chr3L 7190370 intergenic Dscam2 - chr3L 7190628 intergenic not near genes chr3L 7190885 intergenic not near genes chr3L_4_7190001 chr3L_7190001 RAL-383 1359 chr3L 7218072 7218119 chr3L 7218170 7218209 11 95 1.0 5.0 3.0 2.8 137 chr3L 7218072 intergenic not near genes chr3L 7218140 intergenic not near genes chr3L 7218209 intergenic not near genes chr3L_11_7215001 chr3L_7215001 RAL-383 1360 chr3L 7264767 7264891 chr3L 7264883 7264994 8 111 0.0 0.0 0.0 8.0 227 chr3L 7264767 intergenic not near genes chr3L 7264880 intergenic not near genes chr3L 7264994 intergenic not near genes chr3L_8_7260001 chr3L_7260001 RAL-383 1361 chr3L 7274718 7274735 chr3L 7274842 7274859 4 123 0.0 7.0 3.5 0.9 141 chr3L 7274718 intron unc-13-4A - chr3L 7274788 intron unc-13-4A - chr3L 7274859 intron unc-13-4A - chr3L_4_7270001 chr3L_7270001 RAL-383 1362 chr3L 7276155 7276165 chr3L 7276252 7276262 7 97 4.5 11.5 8.0 0.8 107 chr3L 7276155 intron unc-13-4A - chr3L 7276208 intron unc-13-4A - chr3L 7276262 intron unc-13-4A - chr3L_7_7275001 chr3L_7275001 RAL-383 1363 chr3L 7315468 7315500 chr3L 7315581 7315612 15 111 5.5 2.0 3.8 3.1 144 chr3L 7315468 intergenic not near genes chr3L 7315540 intergenic not near genes chr3L 7315612 intergenic not near genes chr3L_15_7315001 chr3L_7315001 RAL-383 1364 chr3L 7377300 7377347 chr3L 7380422 7380468 297 10 3123 7.0 3.0 5.0 1.7 3168 chr3L 7377300 intron SMSr - chr3L 7378884 intron SMSr - chr3L 7380468 intron SMSr - chr3L_10_7375001 chr3L_7375001 RAL-383 1365 chr3L 7403594 7403636 chr3L 7403693 7403717 8 96 2.5 2.5 2.5 2.3 123 chr3L 7403594 exon CG8560 - chr3L 7403656 intron CG8560 - chr3L 7403717 intron CG8560 - chr3L_8_7400001 chr3L_7400001 RAL-383 1366 chr3L 7444007 7444025 chr3L 7444125 7444143 7 118 8.5 0.0 4.2 1.3 136 chr3L 7444007 intron CG42458 + chr3L 7444075 intron CG42458 + chr3L 7444143 intron CG42458 + chr3L_7_7440001 chr3L_7440001 RAL-383 1367 chr3L 7449437 7449455 chr3L 7449521 7449527 4 85 0.0 4.0 2.0 1.3 90 chr3L 7449437 intron CG42458 + chr3L 7449482 intron CG42458 + chr3L 7449527 intron CG42458 + chr3L_4_7445001 chr3L_7445001 RAL-383 1368 chr3L 7450679 7450718 chr3L 7450782 7450818 10 99 3.5 1.0 2.2 3.1 139 chr3L 7450679 intron CG42458 + chr3L 7450748 intron CG42458 + chr3L 7450818 intron CG42458 + chr3L_10_7450001 chr3L_7450001 RAL-383 1369 chr3L 7498710 7498745 chr3L 7503536 7503571 F-element 9 4826 2.0 2.5 2.2 2.8 4861 chr3L 7498710 5` UTR CG8539 - chr3L 7501140 intergenic not near genes chr3L 7503571 intergenic not near genes chr3L_9_7500001 chr3L_7500001 RAL-383 1370 chr3L 7505396 7505442 chr3L 7505492 7505538 10 96 4.0 4.0 4.0 2.0 142 chr3L 7505396 intergenic CG7548 - chr3L 7505467 intergenic CG7548 - chr3L 7505538 intergenic CG7548 - chr3L_10_7505001 chr3L_7505001 RAL-383 1371 chr3L 7524134 7524171 chr3L 7524231 7524273 7 99 1.0 0.0 0.5 4.7 139 chr3L 7524134 intron ltl + chr3L 7524204 intron ltl + chr3L 7524273 intron ltl + chr3L_7_7520001 chr3L_7520001 RAL-383 1372 chr3L 7574842 7574851 chr3L 7574936 7574948 8 97 0.0 3.5 1.8 2.9 106 chr3L 7574842 intergenic not near genes chr3L 7574895 intergenic not near genes chr3L 7574948 intergenic not near genes chr3L_8_7570001 chr3L_7570001 RAL-383 1373 chr3L 7574854 7574858 chr3L 7574927 7574955 4 91 0.0 2.5 1.2 1.8 101 chr3L 7574854 intergenic not near genes chr3L 7574904 intergenic not near genes chr3L 7574955 intergenic not near genes chr3L_4_7570001 chr3L_7570001 RAL-383 1374 chr3L 7581608 7581655 chr3L 7581710 7581744 11 97 4.0 5.0 4.5 2.0 136 chr3L 7581608 intergenic not near genes chr3L 7581676 intergenic not near genes chr3L 7581744 intergenic not near genes chr3L_11_7580001 chr3L_7580001 RAL-383 1375 chr3L 7793696 7793742 chr3L 7800768 7800803 297 17 7071 5.0 7.0 6.0 2.4 7107 chr3L 7793696 intron CG32369 - chr3L 7797250 intron CG32369 - chr3L 7800803 intron CG32369 - chr3L_17_7795001 chr3L_7795001 RAL-383 1376 chr3L 7876082 7876126 chr3L 7876181 7876225 9 99 0.0 0.5 0.2 7.5 143 chr3L 7876082 intron CG32365 + chr3L 7876154 intron CG32365 + chr3L 7876225 intron CG32365 + chr3L_9_7875001 chr3L_7875001 RAL-383 1377 chr3L 7886505 7886546 chr3L 7889031 7889084 Stalker4 20 2535 0.5 2.5 1.5 8.0 2579 chr3L 7886505 intron CG32365 + chr3L 7887794 intron CG32365 + chr3L 7889084 intron CG32365 + chr3L_20_7885001 chr3L_7885001 RAL-383 1378 chr3L 7903047 7903084 chr3L 7903149 7903186 18 101 1.0 5.5 3.2 4.3 139 chr3L 7903047 intron pbl - chr3L 7903116 intron pbl - chr3L 7903186 intron pbl - chr3L_18_7900001 chr3L_7900001 RAL-383 1379 chr3L 7916812 7916860 chr3L 7926003 7926051 roo 11 9191 3.0 3.5 3.2 2.6 9239 chr3L 7916812 3` UTR syd - chr3L 7921432 intron syd - chr3L 7926051 3` UTR syd - chr3L_11_7920001 chr3L_7920001 RAL-383 1380 chr3L 7985368 7985394 chr3L 7987696 7987742 NOF 16 2346 4.5 3.5 4.0 3.2 2374 chr3L 7985368 intron nmo + chr3L 7986555 intron nmo + chr3L 7987742 intron nmo + chr3L_16_7985001 chr3L_7985001 RAL-383 1381 chr3L 8019729 8019734 chr3L 8024119 8024159 NOF 5 4416 0.0 0.5 0.2 4.2 4430 chr3L 8019729 intron nmo + chr3L 8021944 intron nmo + chr3L 8024159 intron nmo + chr3L_5_8020001 chr3L_8020001 RAL-383 1382 chr3L 8057635 8057652 chr3L 8057807 8057836 6 190 6.0 8.0 7.0 0.8 201 chr3L 8057635 intron bip1 - chr3L 8057736 intron bip1 - chr3L 8057836 intron bip1 - chr3L_6_8055001 chr3L_8055001 RAL-383 1383 chr3L 8076173 8076192 chr3L 8076282 8076296 5 108 7.0 3.5 5.2 0.8 123 chr3L 8076173 intron Ect4 + chr3L 8076234 intron Ect4 + chr3L 8076296 intron Ect4 + chr3L_5_8075001 chr3L_8075001 RAL-383 1384 chr3L 8166101 8166139 chr3L 8166339 8166377 8 238 2.5 1.5 2.0 2.7 276 chr3L 8166101 intergenic not near genes chr3L 8166239 intergenic not near genes chr3L 8166377 intergenic not near genes chr3L_8_8165001 chr3L_8165001 RAL-383 1385 chr3L 8208108 8208147 chr3L 8208260 8208294 13 147 3.0 4.0 3.5 2.9 186 chr3L 8208108 intergenic not near genes chr3L 8208201 intergenic not near genes chr3L 8208294 intergenic not near genes chr3L_13_8205001 chr3L_8205001 RAL-383 1386 chr3L 8214718 8214742 chr3L 8214824 8214846 6 104 4.0 8.0 6.0 0.9 128 chr3L 8214718 intergenic not near genes chr3L 8214782 intergenic CG8012 + chr3L 8214846 intergenic CG8012 + chr3L_6_8210001 chr3L_8210001 RAL-383 1387 chr3L 8226695 8226721 chr3L 8226814 8226840 4 119 4.0 0.0 2.0 1.3 145 chr3L 8226695 intergenic not near genes chr3L 8226768 intergenic not near genes chr3L 8226840 intergenic not near genes chr3L_4_8225001 chr3L_8225001 RAL-383 1388 chr3L 8295776 8295825 chr3L 8295954 8296002 17 178 4.5 2.5 3.5 3.8 226 chr3L 8295776 intergenic CG7201 - chr3L 8295889 intergenic not near genes chr3L 8296002 intergenic not near genes chr3L_17_8295001 chr3L_8295001 RAL-383 1389 chr3L 8364504 8364534 chr3L 8364615 8364645 8 111 5.5 0.0 2.8 2.1 141 chr3L 8364504 intergenic not near genes chr3L 8364574 intergenic not near genes chr3L 8364645 intergenic not near genes chr3L_8_8360001 chr3L_8360001 RAL-383 1390 chr3L 8371732 8371748 chr3L 8371838 8371854 5 106 0.0 3.5 1.8 1.8 122 chr3L 8371732 intergenic not near genes chr3L 8371793 intergenic not near genes chr3L 8371854 intergenic not near genes chr3L_5_8370001 chr3L_8370001 RAL-383 1391 chr3L 8413820 8413864 chr3L 8413919 8413949 4 96 4.5 2.0 3.2 1.0 129 chr3L 8413820 intron,3` UTR Exo70 +,mtrm + chr3L 8413884 intron,3` UTR Exo70 +,mtrm + chr3L 8413949 intron,3` UTR Exo70 +,mtrm + chr3L_4_8410001 chr3L_8410001 RAL-383 1392 chr3L 8443552 8443583 chr3L 8443652 8443685 4 102 3.5 4.5 4.0 0.8 133 chr3L 8443552 3` UTR CG6983 - chr3L 8443618 3` UTR CG6983 - chr3L 8443685 3` UTR CG6983 - chr3L_4_8440001 chr3L_8440001 RAL-383 1393 chr3L 8451365 8451415 chr3L 8451472 8451498 11 105 0.0 9.5 4.8 1.9 133 chr3L 8451365 intron Gug + chr3L 8451432 intron Gug + chr3L 8451498 intron Gug + chr3L_11_8450001 chr3L_8450001 RAL-383 1394 chr3L 8491624 8491677 chr3L 8491726 8491779 27 100 4.5 5.5 5.0 4.5 155 chr3L 8491624 intron CG43163 - chr3L 8491702 intron CG43163 - chr3L 8491779 intron CG43163 - chr3L_27_8490001 chr3L_8490001 RAL-383 1395 chr3L 8498282 8498314 chr3L 8505769 8505799 blood 8 7486 5.0 4.0 4.5 1.5 7517 chr3L 8498282 intron CG43163 - chr3L 8502040 intron CG43163 - chr3L 8505799 intron CG43163 - chr3L_8_8500001 chr3L_8500001 RAL-383 1396 chr3L 8576263 8576273 chr3L 8576377 8576387 4 114 1.0 1.5 1.2 1.8 124 chr3L 8576263 intergenic CG6638 - chr3L 8576325 intergenic CG6638 -,CG43078 + chr3L 8576387 intergenic CG6638 -,CG43078 + chr3L_4_8575001 chr3L_8575001 RAL-383 1397 chr3L 8591249 8591281 chr3L 8591385 8591402 4 132 2.5 0.5 1.5 1.6 153 chr3L 8591249 intron CG43078 + chr3L 8591326 intron CG43078 + chr3L 8591402 intron CG43078 + chr3L_4_8590001 chr3L_8590001 RAL-383 1398 chr3L 8752395 8752419 chr3L 8752602 8752626 14 206 4.0 6.0 5.0 2.3 231 chr3L 8752395 intergenic not near genes chr3L 8752510 intergenic not near genes chr3L 8752626 intergenic not near genes chr3L_14_8750001 chr3L_8750001 RAL-383 1399 chr3L 8763864 8763866 chr3L 13374964 13374966 4 4611100 2.0 17.5 9.8 0.4 4611102 chr3L 8763864 intron Fhos + chr3L 11069415 exon CG6310 - chr3L 13374966 intergenic not near genes chr3L_4_11065001 chr3L_11065001 RAL-383 1400 chr3L 8765252 8765303 chr3L 8765356 8765407 12 104 2.5 2.0 2.2 3.8 155 chr3L 8765252 intron Fhos + chr3L 8765330 intron Fhos + chr3L 8765407 intron Fhos + chr3L_12_8765001 chr3L_8765001 RAL-383 1401 chr3L 8784840 8784867 chr3L 8784943 8784970 9 103 1.0 2.0 1.5 3.6 130 chr3L 8784840 intron Fhos + chr3L 8784905 intron Fhos + chr3L 8784970 intron Fhos + chr3L_9_8780001 chr3L_8780001 RAL-383 1402 chr3L 8791259 8791305 chr3L 8796698 8796744 I-element 9 5438 6.5 0.5 3.5 2.0 5485 chr3L 8791259 exon Fhos + chr3L 8794002 intron Fhos + chr3L 8796744 intron Fhos + chr3L_9_8790001 chr3L_8790001 RAL-383 1403 chr3L 8839721 8839748 chr3L 8839821 8839848 7 96 2.5 1.5 2.0 2.3 127 chr3L 8839721 intron dally + chr3L 8839784 intron dally + chr3L 8839848 intron dally + chr3L_7_8835001 chr3L_8835001 RAL-383 1404 chr3L 8849201 8849232 chr3L 8849295 8849316 4 87 3.0 1.5 2.2 1.2 115 chr3L 8849201 intron dally + chr3L 8849258 intron dally + chr3L 8849316 intron dally + chr3L_4_8845001 chr3L_8845001 RAL-383 1405 chr3L 8853557 8853567 chr3L 8853654 8853663 4 104 1.5 2.0 1.8 1.4 106 chr3L 8853557 intron dally + chr3L 8853610 intron dally + chr3L 8853663 intron dally + chr3L_4_8850001 chr3L_8850001 RAL-383 1406 chr3L 8884396 8884423 chr3L 8884611 8884638 9 214 6.5 0.0 3.2 2.1 242 chr3L 8884396 intron dally + chr3L 8884517 intron dally + chr3L 8884638 intron dally + chr3L_9_8880001 chr3L_8880001 RAL-383 1407 chr3L 8916545 8916563 chr3L 8916650 8916668 9 105 0.0 4.5 2.2 2.8 123 chr3L 8916545 intron Tsp66E + chr3L 8916606 intron Tsp66E + chr3L 8916668 intron Tsp66E + chr3L_9_8915001 chr3L_8915001 RAL-383 1408 chr3L 8928250 8928297 chr3L 8928346 8928393 13 96 3.5 4.0 3.8 2.7 143 chr3L 8928250 intron Tsp66E + chr3L 8928322 intron Tsp66E + chr3L 8928393 intron Tsp66E + chr3L_13_8925001 chr3L_8925001 RAL-383 1409 chr3L 8947488 8947495 chr3L 8947580 8947585 5 96 6.0 6.0 6.0 0.7 97 chr3L 8947488 intron,intron CG43783 -,orb2 - chr3L 8947536 intron,intron CG43783 -,orb2 - chr3L 8947585 intron,intron CG43783 -,orb2 - chr3L_5_8945001 chr3L_8945001 RAL-383 1410 chr3L 8947497 8947530 chr3L 8947579 8947589 7 88 2.5 6.0 4.2 1.3 92 chr3L 8947497 intron,intron CG43783 -,orb2 - chr3L 8947543 intron,intron CG43783 -,orb2 - chr3L 8947589 intron,intron CG43783 -,orb2 - chr3L_7_8945001 chr3L_8945001 RAL-383 1411 chr3L 8955476 8955503 chr3L 8955586 8955594 8 114 1.0 5.5 3.2 1.9 118 chr3L 8955476 exon GNBP3 + chr3L 8955535 exon GNBP3 + chr3L 8955594 exon GNBP3 + chr3L_8_8955001 chr3L_8955001 RAL-383 1412 chr3L 9003934 9003973 chr3L 9004039 9004078 13 103 2.5 7.5 5.0 2.2 144 chr3L 9003934 intergenic not near genes chr3L 9004006 intergenic not near genes chr3L 9004078 intergenic not near genes chr3L_13_9000001 chr3L_9000001 RAL-383 1413 chr3L 9013691 9013691 chr3L 18417066 18417066 5 9403375 13.5 15.5 14.5 0.3 9403375 chr3L 9013691 intron Doc2 - chr3L 13715378 intron bru-3 - chr3L 18417066 intergenic not near genes chr3L_5_13715001 chr3L_13715001 RAL-383 1414 chr3L 9024482 9024528 chr3L 9024582 9024628 12 100 5.5 4.5 5.0 2.0 146 chr3L 9024482 intergenic not near genes chr3L 9024555 intergenic not near genes chr3L 9024628 intergenic not near genes chr3L_12_9020001 chr3L_9020001 RAL-383 1415 chr3L 9030414 9030451 chr3L 9030513 9030550 12 96 1.5 4.0 2.8 3.2 136 chr3L 9030414 intergenic not near genes chr3L 9030482 intergenic not near genes chr3L 9030550 intergenic not near genes chr3L_12_9030001 chr3L_9030001 RAL-383 1416 chr3L 9076909 9076915 chr3L 9084488 9084494 412 5 7580 8.0 5.5 6.8 0.6 7585 chr3L 9076909 exon Tequila + chr3L 9080702 intron Tequila + chr3L 9084494 exon Tequila + chr3L_5_9080001 chr3L_9080001 RAL-383 1417 chr3L 9076917 9076954 chr3L 9084485 9084507 412 12 7570 2.0 5.0 3.5 2.7 7590 chr3L 9076917 exon Tequila + chr3L 9080712 intron Tequila + chr3L 9084507 exon Tequila + chr3L_12_9080001 chr3L_9080001 RAL-383 1418 chr3L 9109738 9109775 chr3L 9110552 9110589 4 814 1.5 4.0 2.8 1.1 851 chr3L 9109738 intron bol - chr3L 9110164 intron bol - chr3L 9110589 intron bol - chr3L_4_9110001 chr3L_9110001 RAL-383 1419 chr3L 9130562 9130572 chr3L 9134319 9134353 412 7 3774 4.5 2.0 3.2 1.7 3791 chr3L 9130562 intergenic bol - chr3L 9132458 intergenic not near genes chr3L 9134353 intergenic Dhpr + chr3L_7_9130001 chr3L_9130001 RAL-383 1420 chr3L 9164677 9164709 chr3L 9166164 9166196 hobo 13 1486 6.5 0.0 3.2 3.1 1519 chr3L 9164677 intron Rdl - chr3L 9165436 intron Rdl - chr3L 9166196 intron Rdl - chr3L_13_9165001 chr3L_9165001 RAL-383 1421 chr3L 9219250 9219271 chr3L 9219910 9219942 jockey 7 666 2.0 4.0 3.0 1.8 692 chr3L 9219250 intergenic not near genes chr3L 9219596 intergenic not near genes chr3L 9219942 intergenic not near genes chr3L_7_9215001 chr3L_9215001 RAL-383 1422 chr3L 9220194 9220236 chr3L 9220297 9220339 11 102 2.0 2.5 2.2 3.4 145 chr3L 9220194 intergenic not near genes chr3L 9220266 intergenic not near genes chr3L 9220339 intergenic not near genes chr3L_11_9220001 chr3L_9220001 RAL-383 1423 chr3L 9269607 9269655 chr3L 9269718 9269766 13 109 1.5 1.5 1.5 5.2 159 chr3L 9269607 intron GluRIB + chr3L 9269686 intron GluRIB + chr3L 9269766 intron GluRIB + chr3L_13_9265001 chr3L_9265001 RAL-383 1424 chr3L 9269974 9270028 chr3L 9270075 9270129 10 99 0.0 1.5 0.8 5.6 155 chr3L 9269974 intron GluRIB + chr3L 9270052 intron GluRIB + chr3L 9270129 intron GluRIB + chr3L_10_9270001 chr3L_9270001 RAL-383 1425 chr3L 9270599 9270649 chr3L 9278374 9278424 roo 6 7775 0.0 2.0 1.0 3.0 7825 chr3L 9270599 intron GluRIB + chr3L 9274512 intron GluRIB + chr3L 9278424 exon GluRIB + chr3L_6_9270001 chr3L_9270001 RAL-383 1426 chr3L 9307796 9307796 chr3L 22908066 22908066 4 13600270 13.0 21.5 17.2 0.2 13600270 chr3L 9307796 intergenic not near genes chr3L 16107931 intron Zn72D - chr3L 22908066 intergenic not near genes chr3L_4_16105001 chr3L_16105001 RAL-383 1427 chr3L 9359586 9359619 chr3L 9359687 9359727 14 107 6.5 5.5 6.0 2.0 141 chr3L 9359586 3` UTR CG32039 + chr3L 9359656 3` UTR CG32039 + chr3L 9359727 3` UTR CG32039 + chr3L_14_9355001 chr3L_9355001 RAL-383 1428 chr3L 9403628 9403637 chr3L 9403743 9403752 5 115 11.5 4.0 7.8 0.6 124 chr3L 9403628 intergenic not near genes chr3L 9403690 intergenic not near genes chr3L 9403752 intergenic not near genes chr3L_5_9400001 chr3L_9400001 RAL-383 1429 chr3L 9403643 9403674 chr3L 9403738 9403788 10 105 5.5 3.5 4.5 1.8 145 chr3L 9403643 intergenic not near genes chr3L 9403716 intergenic not near genes chr3L 9403788 intergenic not near genes chr3L_10_9400001 chr3L_9400001 RAL-383 1430 chr3L 9501682 9501731 chr3L 9502188 9502229 roo 10 505 3.5 6.0 4.8 1.7 547 chr3L 9501682 intron path - chr3L 9501956 intron path - chr3L 9502229 intron path - chr3L_10_9500001 chr3L_9500001 RAL-383 1431 chr3L 9502595 9502644 chr3L 9502695 9502744 9 99 0.5 4.0 2.2 2.8 149 chr3L 9502595 intron path - chr3L 9502670 intron path - chr3L 9502744 intron path - chr3L_9_9500001 chr3L_9500001 RAL-383 1432 chr3L 9507797 9507821 chr3L 9507897 9507921 8 98 7.0 4.5 5.8 1.2 124 chr3L 9507797 exon CG3408 - chr3L 9507859 exon CG3408 - chr3L 9507921 exon CG3408 - chr3L_8_9505001 chr3L_9505001 RAL-383 1433 chr3L 9510894 9510909 chr3L 9511007 9511022 6 110 8.0 3.0 5.5 0.9 128 chr3L 9510894 intron RpS9 - chr3L 9510958 intron RpS9 - chr3L 9511022 intron RpS9 - chr3L_6_9510001 chr3L_9510001 RAL-383 1434 chr3L 9510910 9510957 chr3L 9511004 9511052 9 104 0.0 2.5 1.2 4.1 142 chr3L 9510910 intron RpS9 - chr3L 9510981 intron RpS9 - chr3L 9511052 intron RpS9 - chr3L_9_9510001 chr3L_9510001 RAL-383 1435 chr3L 9571893 9571934 chr3L 9572261 9572302 jockey 12 368 3.0 4.5 3.8 2.5 409 chr3L 9571893 intron CG42673 + chr3L 9572098 intron CG42673 + chr3L 9572302 intron CG42673 + chr3L_12_9570001 chr3L_9570001 RAL-383 1436 chr3L 9575928 9575949 chr3L 9580991 9581036 jockey 4 5081 4.5 3.0 3.8 0.8 5108 chr3L 9575928 intron CG42673 + chr3L 9578482 intron CG42673 + chr3L 9581036 intron CG42673 + chr3L_4_9575001 chr3L_9575001 RAL-383 1437 chr3L 9604227 9604236 chr3L 9604341 9604350 4 114 0.5 2.0 1.2 1.8 123 chr3L 9604227 intron CG3280 + chr3L 9604288 intron CG3280 + chr3L 9604350 intron CG3280 + chr3L_4_9600001 chr3L_9600001 RAL-383 1438 chr3L 9629718 9629766 chr3L 9629814 9629862 8 96 1.0 1.5 1.2 3.6 144 chr3L 9629718 intron CG8336 + chr3L 9629790 intron CG8336 + chr3L 9629862 intron CG8336 + chr3L_8_9625001 chr3L_9625001 RAL-383 1439 chr3L 9639035 9639059 chr3L 9639140 9639164 10 105 0.5 8.0 4.2 1.9 129 chr3L 9639035 intron fry - chr3L 9639100 intron fry - chr3L 9639164 intron fry - chr3L_10_9635001 chr3L_9635001 RAL-383 1440 chr3L 9715582 9715622 chr3L 9715678 9715719 6 96 5.0 1.5 3.2 1.4 137 chr3L 9715582 intron vsg + chr3L 9715650 intron vsg + chr3L 9715719 intron vsg + chr3L_6_9715001 chr3L_9715001 RAL-383 1441 chr3L 9745481 9745513 chr3L 9745571 9745619 11 101 2.5 1.0 1.8 3.9 138 chr3L 9745481 intron CG42268 - chr3L 9745550 intron CG42268 - chr3L 9745619 intron CG42268 - chr3L_11_9745001 chr3L_9745001 RAL-383 1442 chr3L 9775346 9775383 chr3L 9775725 9775763 6 376 4.0 1.5 2.8 1.6 417 chr3L 9775346 intron CG8177 + chr3L 9775554 intron CG8177 + chr3L 9775763 intron CG8177 + chr3L_6_9775001 chr3L_9775001 RAL-383 1443 chr3L 9824135 9824158 chr3L 9824234 9824257 14 99 3.5 0.0 1.8 5.0 122 chr3L 9824135 intron CG43897 + chr3L 9824196 intron CG43897 + chr3L 9824257 intron CG43897 + chr3L_14_9820001 chr3L_9820001 RAL-383 1444 chr3L 9829031 9829079 chr3L 9829133 9829178 12 98 3.5 6.0 4.8 2.1 147 chr3L 9829031 intron CG43897 + chr3L 9829104 intron CG43897 + chr3L 9829178 intron CG43897 + chr3L_12_9825001 chr3L_9825001 RAL-383 1445 chr3L 9916107 9916140 chr3L 9916209 9916242 7 99 2.0 3.5 2.8 1.8 135 chr3L 9916107 intron CG34356 + chr3L 9916174 intron CG34356 + chr3L 9916242 intron CG34356 + chr3L_7_9915001 chr3L_9915001 RAL-383 1446 chr3L 9928708 9928752 chr3L 9928818 9928862 13 110 4.5 4.5 4.5 2.4 154 chr3L 9928708 intron CG34356 + chr3L 9928785 intron CG34356 + chr3L 9928862 intron CG34356 + chr3L_13_9925001 chr3L_9925001 RAL-383 1447 chr3L 9929660 9929698 chr3L 9938450 9938498 roo 12 8796 3.5 4.5 4.0 2.4 8838 chr3L 9929660 intron CG34356 + chr3L 9934079 intron CG34356 + chr3L 9938498 intron CG34356 + chr3L_12_9930001 chr3L_9930001 RAL-383 1448 chr3L 9976972 9976989 chr3L 9977073 9977085 6 100 0.0 0.5 0.2 5.0 113 chr3L 9976972 intron dpr6 + chr3L 9977028 intron dpr6 + chr3L 9977085 intron dpr6 + chr3L_6_9975001 chr3L_9975001 RAL-383 1449 chr3L 10003135 10003176 chr3L 10003247 10003293 10 116 7.0 1.5 4.2 1.9 158 chr3L 10003135 intron dpr6 + chr3L 10003214 intron dpr6 + chr3L 10003293 intron dpr6 + chr3L_10_10000001 chr3L_10000001 RAL-383 1450 chr3L 10007170 10007206 chr3L 10007293 10007329 8 122 2.0 6.5 4.2 1.5 159 chr3L 10007170 intron dpr6 + chr3L 10007250 intron dpr6 + chr3L 10007329 intron dpr6 + chr3L_8_10005001 chr3L_10005001 RAL-383 1451 chr3L 10032551 10032563 chr3L 10032658 10032669 5 107 0.0 3.0 1.5 2.0 118 chr3L 10032551 intron dpr6 + chr3L 10032610 intron dpr6 + chr3L 10032669 intron dpr6 + chr3L_5_10030001 chr3L_10030001 RAL-383 1452 chr3L 10060093 10060110 chr3L 10067692 10067709 17.6 5 7598 9.5 3.0 6.2 0.7 7616 chr3L 10060093 intron dpr6 + chr3L 10063901 intron dpr6 + chr3L 10067709 intron dpr6 + chr3L_5_10060001 chr3L_10060001 RAL-383 1453 chr3L 10082547 10082583 chr3L 10082649 10082685 7 102 2.5 0.5 1.5 2.8 138 chr3L 10082547 intron dpr6 + chr3L 10082616 intron dpr6 + chr3L 10082685 intron dpr6 + chr3L_7_10080001 chr3L_10080001 RAL-383 1454 chr3L 10159300 10159352 chr3L 10159408 10159445 11 106 4.5 4.0 4.2 2.1 145 chr3L 10159300 intron dpr10 - chr3L 10159372 intron dpr10 - chr3L 10159445 intron dpr10 - chr3L_11_10155001 chr3L_10155001 RAL-383 1455 chr3L 10191272 10191316 chr3L 10191403 10191447 12 128 1.5 2.5 2.0 4.0 175 chr3L 10191272 exon ect - chr3L 10191360 intron ect - chr3L 10191447 intron ect - chr3L_12_10190001 chr3L_10190001 RAL-383 1456 chr3L 10219218 10219267 chr3L 10219335 10219383 20 117 1.5 5.0 3.2 4.8 165 chr3L 10219218 exon CG32055 - chr3L 10219300 exon CG32055 - chr3L 10219383 exon CG32055 - chr3L_20_10215001 chr3L_10215001 RAL-383 1457 chr3L 10248950 10249136 chr3L 10249048 10249221 10 91 0.0 0.0 0.0 10.0 271 chr3L 10248950 intergenic CR44540 - chr3L 10249086 intergenic CR44540 - chr3L 10249221 intergenic not near genes chr3L_10_10245001 chr3L_10245001 RAL-383 1458 chr3L 10255365 10255408 chr3L 10255483 10255526 8 117 0.5 3.0 1.8 2.9 161 chr3L 10255365 intergenic not near genes chr3L 10255446 intergenic not near genes chr3L 10255526 intergenic not near genes chr3L_8_10255001 chr3L_10255001 RAL-383 1459 chr3L 10282649 10282694 chr3L 10282762 10282801 4 112 2.5 3.0 2.8 1.1 152 chr3L 10282649 intergenic not near genes chr3L 10282725 intergenic not near genes chr3L 10282801 intergenic not near genes chr3L_4_10280001 chr3L_10280001 RAL-383 1460 chr3L 10308742 10308767 chr3L 10308832 10308861 6 95 0.5 7.5 4.0 1.2 119 chr3L 10308742 intergenic not near genes chr3L 10308802 intergenic not near genes chr3L 10308861 intergenic not near genes chr3L_6_10305001 chr3L_10305001 RAL-383 1461 chr3L 10399120 10399173 chr3L 10399223 10399241 9 96 1.0 2.5 1.8 3.2 121 chr3L 10399120 intergenic not near genes chr3L 10399180 intergenic not near genes chr3L 10399241 intergenic not near genes chr3L_9_10395001 chr3L_10395001 RAL-383 1462 chr3L 10414925 10414977 chr3L 10417317 10417322 Doc 12 2384 3.5 3.5 3.5 2.7 2397 chr3L 10414925 intergenic CG12362 + chr3L 10416124 intergenic not near genes chr3L 10417322 intergenic not near genes chr3L_12_10415001 chr3L_10415001 RAL-383 1463 chr3L 10417559 10417585 chr3L 10417649 10417682 4 92 6.0 3.5 4.8 0.7 123 chr3L 10417559 intergenic not near genes chr3L 10417620 intergenic not near genes chr3L 10417682 intergenic not near genes chr3L_4_10415001 chr3L_10415001 RAL-383 1464 chr3L 10417589 10417605 chr3L 10417648 10417687 7 79 4.0 2.5 3.2 1.7 98 chr3L 10417589 intergenic not near genes chr3L 10417638 intergenic not near genes chr3L 10417687 intergenic not near genes chr3L_7_10415001 chr3L_10415001 RAL-383 1465 chr3L 10450679 10450706 chr3L 10450779 10450806 5 100 0.0 6.0 3.0 1.2 127 chr3L 10450679 intergenic not near genes chr3L 10450742 intergenic not near genes chr3L 10450806 intergenic not near genes chr3L_5_10450001 chr3L_10450001 RAL-383 1466 chr3L 10464496 10464524 chr3L 10464602 10464630 5 106 3.0 0.0 1.5 2.0 134 chr3L 10464496 exon CG32061 + chr3L 10464563 3` UTR CG32061 + chr3L 10464630 3` UTR CG32061 + chr3L_5_10460001 chr3L_10460001 RAL-383 1467 chr3L 10584260 10584300 chr3L 10584367 10584407 15 106 3.5 7.0 5.2 2.4 147 chr3L 10584260 intron A2bp1 + chr3L 10584334 intron A2bp1 + chr3L 10584407 intron A2bp1 + chr3L_15_10580001 chr3L_10580001 RAL-383 1468 chr3L 10598812 10598824 chr3L 10598909 10598921 5 97 7.0 0.0 3.5 1.1 109 chr3L 10598812 intergenic not near genes chr3L 10598866 intergenic not near genes chr3L 10598921 intergenic not near genes chr3L_5_10595001 chr3L_10595001 RAL-383 1469 chr3L 10621827 10621877 chr3L 10621934 10621984 11 103 2.0 3.5 2.8 2.9 157 chr3L 10621827 intergenic not near genes chr3L 10621906 intergenic not near genes chr3L 10621984 intergenic not near genes chr3L_11_10620001 chr3L_10620001 RAL-383 1470 chr3L 10762814 10762848 chr3L 10762917 10762946 5 93 6.5 1.0 3.8 1.0 132 chr3L 10762814 intergenic not near genes chr3L 10762880 intergenic not near genes chr3L 10762946 intergenic not near genes chr3L_5_10760001 chr3L_10760001 RAL-383 1471 chr3L 10795045 10795071 chr3L 10795145 10795161 9 97 4.5 0.0 2.2 2.8 116 chr3L 10795045 5` UTR CR44546 + chr3L 10795103 5` UTR CR44546 + chr3L 10795161 5` UTR CR44546 + chr3L_9_10795001 chr3L_10795001 RAL-383 1472 chr3L 10820441 10820524 chr3L 10820649 10820693 5 185 0.0 0.5 0.2 4.2 252 chr3L 10820441 intergenic not near genes chr3L 10820567 intergenic not near genes chr3L 10820693 intergenic not near genes chr3L_5_10820001 chr3L_10820001 RAL-383 1473 chr3L 10889216 10889236 chr3L 10889306 10889336 7 94 11.0 1.5 6.2 1.0 120 chr3L 10889216 intergenic not near genes chr3L 10889276 intergenic not near genes chr3L 10889336 intergenic not near genes chr3L_7_10885001 chr3L_10885001 RAL-383 1474 chr3L 10956371 10956399 chr3L 10956484 10956512 7 113 3.0 0.5 1.8 2.5 141 chr3L 10956371 intergenic not near genes chr3L 10956442 intergenic not near genes chr3L 10956512 intergenic not near genes chr3L_7_10955001 chr3L_10955001 RAL-383 1475 chr3L 11018557 11018577 chr3L 11018663 11018682 9 106 2.0 3.5 2.8 2.4 125 chr3L 11018557 intergenic not near genes chr3L 11018620 intergenic not near genes chr3L 11018682 intergenic not near genes chr3L_9_11015001 chr3L_11015001 RAL-383 1476 chr3L 11054190 11054202 chr3L 11054283 11054298 5 97 4.5 4.0 4.2 1.0 108 chr3L 11054190 5` UTR CG7888 + chr3L 11054244 5` UTR CG7888 + chr3L 11054298 5` UTR CG7888 + chr3L_5_11050001 chr3L_11050001 RAL-383 1477 chr3L 11054646 11054663 chr3L 11054842 11054859 6 196 4.0 2.5 3.2 1.4 213 chr3L 11054646 intron CG7888 + chr3L 11054752 intron CG7888 + chr3L 11054859 intron CG7888 + chr3L_6_11050001 chr3L_11050001 RAL-383 1478 chr3L 11087058 11087087 chr3L 11088866 11088896 S-element 4 1808 1.0 3.0 2.0 1.3 1838 chr3L 11087058 intron JIL-1 - chr3L 11087977 intron JIL-1 - chr3L 11088896 intron JIL-1 - chr3L_4_11085001 chr3L_11085001 RAL-383 1479 chr3L 11135511 11135532 chr3L 11135761 11135782 7 249 1.0 0.5 0.8 3.9 271 chr3L 11135511 intergenic CG14143 + chr3L 11135646 intergenic CG14143 +,CG32082 + chr3L 11135782 intergenic CG32082 +,CG14143 + chr3L_7_11135001 chr3L_11135001 RAL-383 1480 chr3L 11142525 11142556 chr3L 11142632 11142657 13 104 4.0 6.0 5.0 2.2 132 chr3L 11142525 intron CG32082 + chr3L 11142591 intron CG32082 + chr3L 11142657 intron CG32082 + chr3L_13_11140001 chr3L_11140001 RAL-383 1481 chr3L 11219149 11219162 chr3L 11219513 11219515 5 370 4.0 1.5 2.8 1.3 366 chr3L 11219149 intron CG42671 + chr3L 11219332 intron CG42671 + chr3L 11219515 intron CG42671 + chr3L_5_11215001 chr3L_11215001 RAL-383 1482 chr3L 11224527 11224573 chr3L 11224669 11224714 11 139 3.0 3.5 3.2 2.6 187 chr3L 11224527 intron CG42671 + chr3L 11224620 intron CG42671 + chr3L 11224714 intron CG42671 + chr3L_11_11220001 chr3L_11220001 RAL-383 1483 chr3L 11241780 11241786 chr3L 11241874 11241888 5 100 0.0 2.0 1.0 2.5 108 chr3L 11241780 intergenic not near genes chr3L 11241834 intergenic not near genes chr3L 11241888 intergenic not near genes chr3L_5_11240001 chr3L_11240001 RAL-383 1484 chr3L 11245065 11245118 chr3L 11245177 11245230 14 109 3.0 4.5 3.8 2.9 165 chr3L 11245065 intergenic not near genes chr3L 11245148 intergenic not near genes chr3L 11245230 intergenic not near genes chr3L_14_11245001 chr3L_11245001 RAL-383 1485 chr3L 11264445 11264485 chr3L 11271416 11271450 17.6 5 6970 4.5 3.0 3.8 1.0 7005 chr3L 11264445 intergenic not near genes chr3L 11267948 intergenic not near genes chr3L 11271450 intergenic not near genes chr3L_5_11265001 chr3L_11265001 RAL-383 1486 chr3L 11290604 11290654 chr3L 11290947 11290997 12 343 4.5 5.0 4.8 2.1 393 chr3L 11290604 intron CG6175 - chr3L 11290800 intron CG6175 - chr3L 11290997 intron CG6175 - chr3L_12_11290001 chr3L_11290001 RAL-383 1487 chr3L 11303027 11303049 chr3L 11303133 11303155 9 106 3.0 0.0 1.5 3.6 128 chr3L 11303027 intergenic not near genes chr3L 11303091 intergenic not near genes chr3L 11303155 intergenic not near genes chr3L_9_11300001 chr3L_11300001 RAL-383 1488 chr3L 11383951 11383995 chr3L 11384041 11384072 10 87 3.5 2.5 3.0 2.5 121 chr3L 11383951 intron CR42755 - chr3L 11384012 3` UTR CR42755 - chr3L 11384072 3` UTR CR42755 - chr3L_10_11380001 chr3L_11380001 RAL-383 1489 chr3L 11404801 11404854 chr3L 11404936 11404984 20 134 3.0 3.5 3.2 4.8 183 chr3L 11404801 intergenic not near genes chr3L 11404892 intergenic not near genes chr3L 11404984 intergenic not near genes chr3L_20_11400001 chr3L_11400001 RAL-383 1490 chr3L 11435548 11435562 chr3L 11435737 11435751 4 186 7.0 5.0 6.0 0.6 203 chr3L 11435548 intergenic CG6149 -,CR44548 + chr3L 11435650 5` UTR CR44548 + chr3L 11435751 5` UTR CR44548 + chr3L_4_11435001 chr3L_11435001 RAL-383 1491 chr3L 11435563 11435587 chr3L 11435732 11435776 9 184 3.5 5.0 4.2 1.7 213 chr3L 11435563 intergenic CR44548 +,CG6149 - chr3L 11435670 5` UTR CR44548 + chr3L 11435776 5` UTR CR44548 + chr3L_9_11435001 chr3L_11435001 RAL-383 1492 chr3L 11548845 11548849 chr3L 11548943 11548956 4 105 4.5 4.0 4.2 0.8 111 chr3L 11548845 intron Mob2 - chr3L 11548900 intron Mob2 - chr3L 11548956 intron Mob2 - chr3L_4_11545001 chr3L_11545001 RAL-383 1493 chr3L 11548852 11548879 chr3L 11548934 11548986 7 103 2.5 2.0 2.2 2.2 134 chr3L 11548852 intron Mob2 - chr3L 11548919 intron Mob2 - chr3L 11548986 intron Mob2 - chr3L_7_11545001 chr3L_11545001 RAL-383 1494 chr3L 11560769 11560811 chr3L 11560867 11560909 13 98 3.0 2.5 2.8 3.4 140 chr3L 11560769 intron Mob2 - chr3L 11560839 intron Mob2 - chr3L 11560909 intron Mob2 - chr3L_13_11560001 chr3L_11560001 RAL-383 1495 chr3L 11580640 11580655 chr3L 11580748 11580763 6 108 0.0 4.5 2.2 1.9 123 chr3L 11580640 intergenic CG43391 - chr3L 11580702 intergenic CG43391 - chr3L 11580763 intergenic CG43391 - chr3L_6_11580001 chr3L_11580001 RAL-383 1496 chr3L 11678078 11678123 chr3L 11678185 11678230 14 106 4.0 6.0 5.0 2.3 152 chr3L 11678078 intron CG32085 - chr3L 11678154 intron CG32085 - chr3L 11678230 intron CG32085 - chr3L_14_11675001 chr3L_11675001 RAL-383 1497 chr3L 11723067 11723107 chr3L 11727879 11727922 Doc 16 4812 6.5 4.0 5.2 2.6 4855 chr3L 11723067 3` UTR Bmcp + chr3L 11725494 intron Bmcp + chr3L 11727922 3` UTR Bmcp + chr3L_16_11725001 chr3L_11725001 RAL-383 1498 chr3L 11739846 11739881 chr3L 11739968 11740019 9 126 30.5 30.5 30.5 0.3 173 chr3L 11739846 intron CG6024 - chr3L 11739932 intron CG6024 - chr3L 11740019 intron CG6024 - chr3L_9_11735001 chr3L_11735001 RAL-383 1499 chr3L 7749470 7749471 chr3L 11777678 11777678 7 4028207 12.0 15.5 13.8 0.5 4028208 chr3L 7749470 intron,3` UTR CG32373 +,CG13685 + chr3L 9763574 5` UTR CG8177 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_7_9760001 chr3L_9760001 RAL-383 1500 chr3L 9313027 9313027 chr3L 11777678 11777678 5 2464651 4.0 15.5 9.8 0.5 2464651 chr3L 9313027 intergenic not near genes chr3L 10545352 intron A2bp1 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_5_10545001 chr3L_10545001 RAL-383 1501 chr3L 11777678 11777678 chr3L 12163305 12163305 5 385627 18.5 11.5 15.0 0.3 385627 chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L 11970492 exon Muc68E - chr3L 12163305 intron CG9760 - chr3L_5_11970001 chr3L_11970001 RAL-383 1502 chr3L 11826544 11826584 chr3L 11826666 11826712 14 124 2.0 3.5 2.8 3.7 168 chr3L 11826544 intergenic CycA - chr3L 11826628 intergenic CycA - chr3L 11826712 intergenic CycA - chr3L_14_11825001 chr3L_11825001 RAL-383 1503 chr3L 11846403 11846413 chr3L 11846531 11846541 4 128 1.0 10.0 5.5 0.6 138 chr3L 11846403 intergenic not near genes chr3L 11846472 intergenic not near genes chr3L 11846541 intergenic not near genes chr3L_4_11845001 chr3L_11845001 RAL-383 1504 chr3L 11847121 11847172 chr3L 11847231 11847282 11 110 3.0 0.0 1.5 4.4 161 chr3L 11847121 intergenic CG12521 - chr3L 11847202 intergenic CG12521 - chr3L 11847282 intergenic CG12521 - chr3L_11_11845001 chr3L_11845001 RAL-383 1505 chr3L 11849311 11849357 chr3L 11849431 11849443 10 116 2.0 3.0 2.5 2.9 132 chr3L 11849311 intergenic not near genes chr3L 11849377 intergenic not near genes chr3L 11849443 intergenic not near genes chr3L_10_11845001 chr3L_11845001 RAL-383 1506 chr3L 11850119 11850160 chr3L 11850234 11850274 17 111 2.0 0.0 1.0 8.5 155 chr3L 11850119 intergenic not near genes chr3L 11850196 intergenic CG44837 - chr3L 11850274 intergenic CG44837 - chr3L_17_11850001 chr3L_11850001 RAL-383 1507 chr3L 11854856 11854888 chr3L 11854977 11855009 12 121 1.0 6.5 3.8 2.5 153 chr3L 11854856 exon CG44837 - chr3L 11854932 intron CG44837 - chr3L 11855009 intron CG44837 - chr3L_12_11850001 chr3L_11850001 RAL-383 1508 chr3L 11862185 11862234 chr3L 11862956 11862989 5 765 17.0 12.0 14.5 0.3 804 chr3L 11862185 intron CG44837 - chr3L 11862587 intron CG44837 - chr3L 11862989 intron CG44837 - chr3L_5_11860001 chr3L_11860001 RAL-383 1509 chr3L 11864532 11864584 chr3L 11865847 11865898 pogo 24 1312 1.0 4.5 2.8 6.3 1366 chr3L 11864532 intron CG44837 - chr3L 11865215 intron CG44837 - chr3L 11865898 intron CG44837 - chr3L_24_11865001 chr3L_11865001 RAL-383 1510 chr3L 11887239 11887286 chr3L 11887356 11887408 10 118 4.5 0.5 2.5 2.9 169 chr3L 11887239 intron CG44837 - chr3L 11887324 intron,3` UTR CG44837 -,CG5897 - chr3L 11887408 intron,3` UTR CG44837 -,CG5897 - chr3L_10_11885001 chr3L_11885001 RAL-383 1511 chr3L 11943476 11943521 chr3L 11943597 11943642 11 121 3.0 6.0 4.5 2.0 166 chr3L 11943476 3` UTR Rpt4R + chr3L 11943559 intergenic Rpt4R +,CG5883 - chr3L 11943642 3` UTR CG5883 - chr3L_11_11940001 chr3L_11940001 RAL-383 1512 chr3L 12034871 12034913 chr3L 12034968 12035010 14 97 1.5 3.5 2.5 4.0 139 chr3L 12034871 intron rols - chr3L 12034940 intron rols - chr3L 12035010 intron rols - chr3L_14_12030001 chr3L_12030001 RAL-383 1513 chr3L 12075408 12075449 chr3L 12075516 12075533 6 105 3.5 0.0 1.8 2.1 125 chr3L 12075408 intron Sema-5c - chr3L 12075470 intron Sema-5c - chr3L 12075533 intron Sema-5c - chr3L_6_12075001 chr3L_12075001 RAL-383 1514 chr3L 12089060 12089112 chr3L 12089160 12089212 21 100 2.5 3.0 2.8 5.5 152 chr3L 12089060 exon CG17154 + chr3L 12089136 3` UTR CG17154 + chr3L 12089212 3` UTR CG17154 + chr3L_21_12085001 chr3L_12085001 RAL-383 1515 chr3L 12092381 12092419 chr3L 12092478 12092515 9 96 2.0 4.5 3.2 2.1 134 chr3L 12092381 intergenic not near genes chr3L 12092448 intergenic not near genes chr3L 12092515 intergenic not near genes chr3L_9_12090001 chr3L_12090001 RAL-383 1516 chr3L 12114058 12114087 chr3L 12114164 12114178 6 101 3.5 3.5 3.5 1.3 120 chr3L 12114058 intergenic not near genes chr3L 12114118 intergenic not near genes chr3L 12114178 intergenic not near genes chr3L_6_12110001 chr3L_12110001 RAL-383 1517 chr3L 12170773 12170818 chr3L 12170875 12170920 4 102 1.5 3.0 2.2 1.2 147 chr3L 12170773 intron Rh7 - chr3L 12170846 intron Rh7 - chr3L 12170920 intron Rh7 - chr3L_4_12170001 chr3L_12170001 RAL-383 1518 chr3L 12186347 12186395 chr3L 12186461 12186531 5 123 3.0 0.0 1.5 2.0 184 chr3L 12186347 intron CG6910 + chr3L 12186439 intron CG6910 + chr3L 12186531 intron CG6910 + chr3L_5_12185001 chr3L_12185001 RAL-383 1519 chr3L 12227238 12227288 chr3L 12227720 12227770 9 481 0.5 2.0 1.2 4.1 532 chr3L 12227238 intron app - chr3L 12227504 intron app - chr3L 12227770 intron app - chr3L_9_12225001 chr3L_12225001 RAL-383 1520 chr3L 12231379 12231422 chr3L 12231658 12231701 11 280 28.0 31.0 29.5 0.4 322 chr3L 12231379 intron app - chr3L 12231540 intron app - chr3L 12231701 intron app - chr3L_11_12230001 chr3L_12230001 RAL-383 1521 chr3L 12304090 12304115 chr3L 12304178 12304211 10 94 2.0 2.5 2.2 3.1 121 chr3L 12304090 intergenic not near genes chr3L 12304150 intergenic not near genes chr3L 12304211 intergenic not near genes chr3L_10_12300001 chr3L_12300001 RAL-383 1522 chr3L 12312484 12312496 chr3L 12312582 12312584 4 94 3.5 5.5 4.5 0.7 100 chr3L 12312484 intergenic not near genes chr3L 12312534 intergenic not near genes chr3L 12312584 intergenic not near genes chr3L_4_12310001 chr3L_12310001 RAL-383 1523 chr3L 12315798 12315845 chr3L 12315907 12315954 13 109 4.0 1.5 2.8 3.4 156 chr3L 12315798 intergenic not near genes chr3L 12315876 intergenic not near genes chr3L 12315954 intergenic not near genes chr3L_13_12315001 chr3L_12315001 RAL-383 1524 chr3L 12381520 12381544 chr3L 12381618 12381642 10 98 0.5 0.0 0.2 8.3 122 chr3L 12381520 intron Ncc69 - chr3L 12381581 intron Ncc69 - chr3L 12381642 intron Ncc69 - chr3L_10_12380001 chr3L_12380001 RAL-383 1525 chr3L 12555609 12555652 chr3L 12555714 12555766 14 112 5.5 2.0 3.8 2.9 157 chr3L 12555609 intron sowah - chr3L 12555688 intron sowah - chr3L 12555766 intron sowah - chr3L_14_12555001 chr3L_12555001 RAL-383 1526 chr3L 12614579 12614597 chr3L 12614737 12614755 6 158 0.5 2.0 1.2 2.7 176 chr3L 12614579 intron caup + chr3L 12614667 intron caup + chr3L 12614755 intron caup + chr3L_6_12610001 chr3L_12610001 RAL-383 1527 chr3L 12626156 12626180 chr3L 12626285 12626301 7 127 2.5 0.0 1.2 3.2 145 chr3L 12626156 intergenic not near genes chr3L 12626228 intergenic not near genes chr3L 12626301 intergenic not near genes chr3L_7_12625001 chr3L_12625001 RAL-383 1528 chr3L 12668064 12668097 chr3L 12668169 12668202 6 105 0.0 3.0 1.5 2.4 138 chr3L 12668064 intergenic not near genes chr3L 12668133 intergenic not near genes chr3L 12668202 intergenic not near genes chr3L_6_12665001 chr3L_12665001 RAL-383 1529 chr3L 12706627 12706653 chr3L 12706774 12706784 8 144 6.5 6.5 6.5 1.1 157 chr3L 12706627 intron mirr + chr3L 12706706 intron mirr + chr3L 12706784 intron mirr + chr3L_8_12705001 chr3L_12705001 RAL-383 1530 chr3L 12799820 12799827 chr3L 12799948 12799955 5 128 9.0 10.5 9.8 0.5 135 chr3L 12799820 intron Atg1 - chr3L 12799888 intron Atg1 - chr3L 12799955 intron Atg1 - chr3L_5_12795001 chr3L_12795001 RAL-383 1531 chr3L 12801958 12802012 chr3L 12802054 12802087 11 94 2.5 2.5 2.5 3.1 129 chr3L 12801958 intron Atg1 - chr3L 12802022 intron Atg1 - chr3L 12802087 intron Atg1 - chr3L_11_12800001 chr3L_12800001 RAL-383 1532 chr3L 12830428 12830454 chr3L 12830537 12830555 6 106 5.5 1.5 3.5 1.3 127 chr3L 12830428 intron CG10960 - chr3L 12830492 intron CG10960 - chr3L 12830555 intron CG10960 - chr3L_6_12830001 chr3L_12830001 RAL-383 1533 chr3L 12867532 12867577 chr3L 12867644 12867670 9 109 2.0 3.0 2.5 2.6 138 chr3L 12867532 intergenic not near genes chr3L 12867601 intergenic not near genes chr3L 12867670 intergenic not near genes chr3L_9_12865001 chr3L_12865001 RAL-383 1534 chr3L 12874908 12874933 chr3L 12877220 12877245 jockey 7 2310 6.0 6.0 6.0 1.0 2337 chr3L 12874908 intergenic not near genes chr3L 12876076 intergenic not near genes chr3L 12877245 intergenic not near genes chr3L_7_12875001 chr3L_12875001 RAL-383 1535 chr3L 12894788 12894796 chr3L 12894886 12894894 4 98 10.0 4.5 7.2 0.5 106 chr3L 12894788 intergenic CG14118 + chr3L 12894841 intergenic CG14118 + chr3L 12894894 intergenic CG14118 + chr3L_4_12890001 chr3L_12890001 RAL-383 1536 chr3L 12919261 12919280 chr3L 12924749 12924772 Rt1c 6 5487 9.0 4.5 6.8 0.8 5511 chr3L 12919261 intergenic not near genes chr3L 12922016 intergenic not near genes chr3L 12924772 intergenic not near genes chr3L_6_12920001 chr3L_12920001 RAL-383 1537 chr3L 12919283 12919295 chr3L 12924739 12924755 Rt1c 4 5465 6.5 3.0 4.8 0.7 5472 chr3L 12919283 intergenic not near genes chr3L 12922019 intergenic not near genes chr3L 12924755 intergenic not near genes chr3L_4_12920001 chr3L_12920001 RAL-383 1538 chr3L 12955112 12955163 chr3L 12955208 12955259 15 94 4.0 2.5 3.2 3.6 147 chr3L 12955112 intergenic CG10752 - chr3L 12955186 intergenic not near genes chr3L 12955259 intergenic not near genes chr3L_15_12955001 chr3L_12955001 RAL-383 1539 chr3L 12955409 12955462 chr3L 12955519 12955573 12 109 3.0 2.0 2.5 3.4 164 chr3L 12955409 intergenic not near genes chr3L 12955491 intergenic not near genes chr3L 12955573 intergenic not near genes chr3L_12_12955001 chr3L_12955001 RAL-383 1540 chr3L 12957772 12957809 chr3L 12962274 12962311 copia 9 4502 3.0 5.5 4.2 1.7 4539 chr3L 12957772 intergenic not near genes chr3L 12960042 intergenic not near genes chr3L 12962311 intergenic not near genes chr3L_9_12960001 chr3L_12960001 RAL-383 1541 chr3L 12971186 12971236 chr3L 12971474 12971513 6 286 3.5 3.5 3.5 1.3 327 chr3L 12971186 intergenic CG10748 - chr3L 12971350 exon CG10748 - chr3L 12971513 exon CG10748 - chr3L_6_12970001 chr3L_12970001 RAL-383 1542 chr3L 12980500 12980549 chr3L 12980607 12980662 8 101 2.0 0.0 1.0 4.0 162 chr3L 12980500 intergenic not near genes chr3L 12980581 intergenic not near genes chr3L 12980662 intergenic not near genes chr3L_8_12980001 chr3L_12980001 RAL-383 1543 chr3L 13008395 13008434 chr3L 13008494 13008534 7 99 4.0 4.0 4.0 1.4 139 chr3L 13008395 5` UTR CG14117 + chr3L 13008464 5` UTR CG14117 + chr3L 13008534 5` UTR CG14117 + chr3L_7_13005001 chr3L_13005001 RAL-383 1544 chr3L 13069539 13069581 chr3L 13069638 13069680 19 98 2.0 6.0 4.0 3.8 141 chr3L 13069539 intergenic not near genes chr3L 13069610 intergenic not near genes chr3L 13069680 intergenic not near genes chr3L_19_13065001 chr3L_13065001 RAL-383 1545 chr3L 13131386 13131421 chr3L 13131491 13131526 6 105 6.5 4.5 5.5 0.9 140 chr3L 13131386 intergenic not near genes chr3L 13131456 intergenic not near genes chr3L 13131526 intergenic not near genes chr3L_6_13130001 chr3L_13130001 RAL-383 1546 chr3L 13131431 13131437 chr3L 13131488 13131535 4 86 4.5 4.0 4.2 0.8 104 chr3L 13131431 intergenic not near genes chr3L 13131483 intergenic not near genes chr3L 13131535 intergenic not near genes chr3L_4_13130001 chr3L_13130001 RAL-383 1547 chr3L 13182428 13182471 chr3L 13182526 13182568 5 98 5.0 0.5 2.8 1.3 140 chr3L 13182428 intergenic not near genes chr3L 13182498 intergenic not near genes chr3L 13182568 intergenic not near genes chr3L_5_13180001 chr3L_13180001 RAL-383 1548 chr3L 13194050 13194098 chr3L 13194144 13194197 8 96 1.5 2.5 2.0 2.7 147 chr3L 13194050 intergenic not near genes chr3L 13194124 intergenic not near genes chr3L 13194197 intergenic not near genes chr3L_8_13190001 chr3L_13190001 RAL-383 1549 chr3L 13204627 13204678 chr3L 13204753 13204804 11 126 4.0 1.5 2.8 2.9 177 chr3L 13204627 intergenic not near genes chr3L 13204716 intergenic not near genes chr3L 13204804 intergenic not near genes chr3L_11_13200001 chr3L_13200001 RAL-383 1550 chr3L 13206223 13206260 chr3L 13206325 13206362 14 99 4.5 2.5 3.5 3.1 139 chr3L 13206223 intergenic not near genes chr3L 13206292 intergenic not near genes chr3L 13206362 intergenic not near genes chr3L_14_13205001 chr3L_13205001 RAL-383 1551 chr3L 13296506 13296543 chr3L 13296617 13296654 8 111 5.0 3.5 4.2 1.5 148 chr3L 13296506 intergenic Sfp70A4 -,CR45253 + chr3L 13296580 3` UTR Sfp70A4 - chr3L 13296654 3` UTR Sfp70A4 - chr3L_8_13295001 chr3L_13295001 RAL-383 1552 chr3L 13301246 13301251 chr3L 13301347 13301350 4 100 0.0 0.0 0.0 4.0 104 chr3L 13301246 intergenic SP + chr3L 13301298 intergenic SP + chr3L 13301350 intergenic SP + chr3L_4_13300001 chr3L_13300001 RAL-383 1553 chr3L 13337149 13337156 chr3L 13337260 13337267 5 111 0.0 1.5 0.8 2.8 118 chr3L 13337149 intergenic not near genes chr3L 13337208 intergenic not near genes chr3L 13337267 intergenic not near genes chr3L_5_13335001 chr3L_13335001 RAL-383 1554 chr3L 13338288 13338314 chr3L 13338393 13338422 8 111 1.5 3.5 2.5 2.3 134 chr3L 13338288 intergenic not near genes chr3L 13338355 intergenic not near genes chr3L 13338422 intergenic not near genes chr3L_8_13335001 chr3L_13335001 RAL-383 1555 chr3L 13379674 13379684 chr3L 13379864 13379874 6 190 4.5 3.5 4.0 1.2 200 chr3L 13379674 intron CG14111 + chr3L 13379774 intron CG14111 + chr3L 13379874 intron CG14111 + chr3L_6_13375001 chr3L_13375001 RAL-383 1556 chr3L 13455732 13455782 chr3L 13455907 13455940 15 169 1.5 3.0 2.2 4.7 208 chr3L 13455732 intron CG10738 + chr3L 13455836 intron CG10738 + chr3L 13455940 intron CG10738 + chr3L_15_13455001 chr3L_13455001 RAL-383 1557 chr3L 13525146 13525183 chr3L 13532951 13532962 roo 11 7807 9.0 4.5 6.8 1.4 7816 chr3L 13525146 intergenic not near genes chr3L 13529054 intergenic not near genes chr3L 13532962 intergenic not near genes chr3L_11_13525001 chr3L_13525001 RAL-383 1558 chr3L 13535398 13535442 chr3L 13535502 13535546 8 104 1.5 1.0 1.2 3.6 148 chr3L 13535398 intergenic not near genes chr3L 13535472 intergenic not near genes chr3L 13535546 intergenic not near genes chr3L_8_13535001 chr3L_13535001 RAL-383 1559 chr3L 13626671 13626705 chr3L 13626775 13626809 11 104 6.5 2.5 4.5 2.0 138 chr3L 13626671 intron bru-3 - chr3L 13626740 intron bru-3 - chr3L 13626809 intron bru-3 - chr3L_11_13625001 chr3L_13625001 RAL-383 1560 chr3L 13629510 13629546 chr3L 13629641 13629642 7 126 2.5 4.0 3.2 1.7 132 chr3L 13629510 intron bru-3 - chr3L 13629576 intron bru-3 - chr3L 13629642 intron bru-3 - chr3L_7_13625001 chr3L_13625001 RAL-383 1561 chr3L 13633394 13633433 chr3L 13633768 13633786 9 370 3.5 2.0 2.8 2.4 392 chr3L 13633394 intron bru-3 - chr3L 13633590 intron bru-3 - chr3L 13633786 intron bru-3 - chr3L_9_13630001 chr3L_13630001 RAL-383 1562 chr3L 13648878 13648921 chr3L 13648988 13649030 9 106 5.5 0.5 3.0 2.2 152 chr3L 13648878 intron bru-3 - chr3L 13648954 intron bru-3 - chr3L 13649030 intron bru-3 - chr3L_9_13645001 chr3L_13645001 RAL-383 1563 chr3L 13687740 13687775 chr3L 13687865 13687905 14 134 3.0 3.5 3.2 3.3 165 chr3L 13687740 intron bru-3 - chr3L 13687822 intron bru-3 - chr3L 13687905 intron bru-3 - chr3L_14_13685001 chr3L_13685001 RAL-383 1564 chr3L 13736345 13736393 chr3L 13736593 13736643 10 243 0.5 2.0 1.2 4.5 298 chr3L 13736345 intron bru-3 - chr3L 13736494 intron bru-3 - chr3L 13736643 intron bru-3 - chr3L_10_13735001 chr3L_13735001 RAL-383 1565 chr3L 13740020 13740054 chr3L 13740132 13740155 4 109 3.0 6.5 4.8 0.7 135 chr3L 13740020 intron bru-3 - chr3L 13740088 intron bru-3 - chr3L 13740155 intron bru-3 - chr3L_4_13740001 chr3L_13740001 RAL-383 1566 chr3L 13804529 13804573 chr3L 13822834 13822879 roo 13 18306 4.0 1.0 2.5 3.7 18350 chr3L 13804529 intergenic not near genes chr3L 13813704 intergenic not near genes chr3L 13822879 intergenic not near genes chr3L_13_13810001 chr3L_13810001 RAL-383 1567 chr3L 13841504 13841543 chr3L 13841608 13841647 11 96 2.5 1.0 1.8 3.9 143 chr3L 13841504 exon CG8757 - chr3L 13841576 intron CG8757 - chr3L 13841647 exon CG8757 - chr3L_11_13840001 chr3L_13840001 RAL-383 1568 chr3L 13884362 13884386 chr3L 13884473 13884496 6 110 10.0 4.5 7.2 0.7 134 chr3L 13884362 intron dysc - chr3L 13884429 intron dysc - chr3L 13884496 intron dysc - chr3L_6_13880001 chr3L_13880001 RAL-383 1569 chr3L 13920401 13920433 chr3L 13920501 13920527 10 99 2.0 4.5 3.2 2.4 126 chr3L 13920401 intron Rgl - chr3L 13920464 intron Rgl - chr3L 13920527 intron Rgl - chr3L_10_13920001 chr3L_13920001 RAL-383 1570 chr3L 13936476 13936650 chr3L 13936575 13936804 4 126 1.5 4.5 3.0 1.0 328 chr3L 13936476 intergenic not near genes chr3L 13936640 intergenic not near genes chr3L 13936804 intergenic not near genes chr3L_4_13935001 chr3L_13935001 RAL-383 1571 chr3L 13954184 13954188 chr3L 13954241 13954292 4 92 2.0 0.0 1.0 2.0 108 chr3L 13954184 intron CG32137 + chr3L 13954238 intron CG32137 + chr3L 13954292 intron CG32137 + chr3L_4_13950001 chr3L_13950001 RAL-383 1572 chr3L 14117439 14117460 chr3L 14117546 14117556 5 105 5.0 0.0 2.5 1.4 117 chr3L 14117439 intron Sox21b - chr3L 14117498 intron Sox21b - chr3L 14117556 intron Sox21b - chr3L_5_14115001 chr3L_14115001 RAL-383 1573 chr3L 14141398 14141409 chr3L 14141505 14141516 4 107 1.5 0.0 0.8 2.2 118 chr3L 14141398 intergenic not near genes chr3L 14141457 intergenic not near genes chr3L 14141516 intergenic not near genes chr3L_4_14140001 chr3L_14140001 RAL-383 1574 chr3L 14144120 14144148 chr3L 14144218 14144246 7 95 4.0 0.0 2.0 2.3 126 chr3L 14144120 intergenic not near genes chr3L 14144183 intergenic not near genes chr3L 14144246 intergenic not near genes chr3L_7_14140001 chr3L_14140001 RAL-383 1575 chr3L 14245562 14245592 chr3L 14245675 14245706 1360 7 112 2.5 3.5 3.0 1.8 144 chr3L 14245562 3` UTR CR44561 - chr3L 14245634 3` UTR CR44561 - chr3L 14245706 intergenic CR44561 -,CR44560 + chr3L_7_14245001 chr3L_14245001 RAL-383 1576 chr3L 14262565 14262592 chr3L 14262678 14262704 8 112 3.5 0.0 1.8 2.9 139 chr3L 14262565 intergenic not near genes chr3L 14262634 intergenic not near genes chr3L 14262704 intergenic not near genes chr3L_8_14260001 chr3L_14260001 RAL-383 1577 chr3L 14267391 14267405 chr3L 14271823 14271837 F-element 8 4432 3.0 0.0 1.5 3.2 4446 chr3L 14267391 intergenic not near genes chr3L 14269614 intergenic not near genes chr3L 14271837 intergenic not near genes chr3L_8_14265001 chr3L_14265001 RAL-383 1578 chr3L 14282576 14282606 chr3L 14282676 14282706 7 98 3.5 9.0 6.2 1.0 130 chr3L 14282576 intron fz + chr3L 14282641 intron fz + chr3L 14282706 intron fz + chr3L_7_14280001 chr3L_14280001 RAL-383 1579 chr3L 14295971 14296013 chr3L 14296472 14296519 roo 11 504 3.0 4.0 3.5 2.4 548 chr3L 14295971 intron fz + chr3L 14296245 intron fz + chr3L 14296519 intron fz + chr3L_11_14295001 chr3L_14295001 RAL-383 1580 chr3L 14326960 14326999 chr3L 14327109 14327155 13 154 2.5 5.0 3.8 2.7 195 chr3L 14326960 intron fz + chr3L 14327058 intron fz + chr3L 14327155 intron fz + chr3L_13_14325001 chr3L_14325001 RAL-383 1581 chr3L 14338286 14338327 chr3L 14338402 14338443 12 114 2.5 3.5 3.0 3.0 157 chr3L 14338286 intron fz + chr3L 14338364 intron fz + chr3L 14338443 intron fz + chr3L_12_14335001 chr3L_14335001 RAL-383 1582 chr3L 14410138 14410185 chr3L 14410246 14410293 10 108 1.0 2.5 1.8 3.6 155 chr3L 14410138 3` UTR CR45233 - chr3L 14410216 3` UTR CR45233 - chr3L 14410293 3` UTR CR45233 - chr3L_10_14410001 chr3L_14410001 RAL-383 1583 chr3L 14411843 14411896 chr3L 14411942 14411995 8 96 2.5 3.0 2.8 2.1 152 chr3L 14411843 intron CG3919 + chr3L 14411919 intron CG3919 + chr3L 14411995 intron CG3919 + chr3L_8_14410001 chr3L_14410001 RAL-383 1584 chr3L 14441574 14441624 chr3L 14441743 14441793 13 169 1.5 3.5 2.5 3.7 219 chr3L 14441574 intron bbg - chr3L 14441684 intron bbg - chr3L 14441793 intron bbg - chr3L_13_14440001 chr3L_14440001 RAL-383 1585 chr3L 14444707 14444745 chr3L 14444902 14444940 16 194 3.5 9.5 6.5 2.1 233 chr3L 14444707 intron bbg - chr3L 14444824 intron bbg - chr3L 14444940 intron bbg - chr3L_16_14440001 chr3L_14440001 RAL-383 1586 chr3L 14468435 14468476 chr3L 14473661 14473702 copia 9 5226 2.5 2.5 2.5 2.6 5267 chr3L 14468435 intron bbg - chr3L 14471068 intron bbg - chr3L 14473702 intron bbg - chr3L_9_14470001 chr3L_14470001 RAL-383 1587 chr3L 14486000 14486048 chr3L 14486101 14486103 9 94 2.5 2.5 2.5 2.6 103 chr3L 14486000 intron bbg - chr3L 14486052 intron bbg - chr3L 14486103 intron bbg - chr3L_9_14485001 chr3L_14485001 RAL-383 1588 chr3L 14522093 14522126 chr3L 14522212 14522245 9 111 1.0 2.5 1.8 3.2 152 chr3L 14522093 intron bbg - chr3L 14522169 intron bbg - chr3L 14522245 intron bbg - chr3L_9_14520001 chr3L_14520001 RAL-383 1589 chr3L 14533060 14533097 chr3L 14533166 14533203 7 102 3.5 1.0 2.2 2.2 143 chr3L 14533060 intron bbg - chr3L 14533132 intron bbg - chr3L 14533203 intron bbg - chr3L_7_14530001 chr3L_14530001 RAL-383 1590 chr3L 14534742 14534754 chr3L 14534839 14534851 4 97 2.5 2.5 2.5 1.1 109 chr3L 14534742 intron bbg - chr3L 14534796 intron bbg - chr3L 14534851 intron bbg - chr3L_4_14530001 chr3L_14530001 RAL-383 1591 chr3L 14568266 14568276 chr3L 14568332 14568380 7 98 0.0 2.0 1.0 3.5 114 chr3L 14568266 intergenic CG42758 + chr3L 14568323 intergenic CG42758 + chr3L 14568380 intergenic CG42758 + chr3L_7_14565001 chr3L_14565001 RAL-383 1592 chr3L 14611435 14611479 chr3L 14611552 14611596 11 116 2.5 2.5 2.5 3.1 161 chr3L 14611435 intergenic not near genes chr3L 14611516 intergenic not near genes chr3L 14611596 intergenic not near genes chr3L_11_14610001 chr3L_14610001 RAL-383 1593 chr3L 14714670 14714716 chr3L 14714769 14714815 18 93 2.0 5.5 3.8 3.8 145 chr3L 14714670 intron ome + chr3L 14714742 intron ome + chr3L 14714815 intron ome + chr3L_18_14710001 chr3L_14710001 RAL-383 1594 chr3L 14713630 14713681 chr3L 14716563 14716614 13 2934 41.5 36.0 38.8 0.3 2984 chr3L 14713630 intron ome + chr3L 14715122 intron ome + chr3L 14716614 intron ome + chr3L_13_14715001 chr3L_14715001 RAL-383 1595 chr3L 14721178 14721206 chr3L 14723025 14723051 Rt1c 5 1855 3.0 1.5 2.2 1.6 1873 chr3L 14721178 intron ome + chr3L 14722114 intron ome + chr3L 14723051 intron ome + chr3L_5_14720001 chr3L_14720001 RAL-383 1596 chr3L 14810592 14810646 chr3L 14810994 14811027 13 395 5.0 0.5 2.8 3.4 435 chr3L 14810592 intron CG17839 + chr3L 14810810 intron CG17839 + chr3L 14811027 intron CG17839 + chr3L_13_14810001 chr3L_14810001 RAL-383 1597 chr3L 14844244 14844287 chr3L 14844355 14844398 18 109 3.5 3.5 3.5 4.0 154 chr3L 14844244 intron CG17839 + chr3L 14844321 intron CG17839 + chr3L 14844398 intron CG17839 + chr3L_18_14840001 chr3L_14840001 RAL-383 1598 chr3L 14861785 14861836 chr3L 14861885 14861936 9 97 2.0 1.0 1.5 3.6 151 chr3L 14861785 intron CG17839 + chr3L 14861860 intron CG17839 + chr3L 14861936 intron CG17839 + chr3L_9_14860001 chr3L_14860001 RAL-383 1599 chr3L 14892430 14892482 chr3L 14892527 14892579 18 97 4.0 5.0 4.5 3.3 149 chr3L 14892430 intergenic not near genes chr3L 14892504 intergenic not near genes chr3L 14892579 intergenic not near genes chr3L_18_14890001 chr3L_14890001 RAL-383 1600 chr3L 14933429 14933460 chr3L 14933531 14933562 5 100 2.5 4.0 3.2 1.2 133 chr3L 14933429 intron DCX-EMAP + chr3L 14933496 intron DCX-EMAP + chr3L 14933562 intron DCX-EMAP + chr3L_5_14930001 chr3L_14930001 RAL-383 1601 chr3L 14944816 14944864 chr3L 14944923 14944971 4 107 3.5 3.0 3.2 1.0 155 chr3L 14944816 intergenic CG13465 - chr3L 14944894 intergenic not near genes chr3L 14944971 intergenic not near genes chr3L_4_14940001 chr3L_14940001 RAL-383 1602 chr3L 14959971 14960010 chr3L 14960075 14960114 11 104 2.5 0.5 1.5 4.4 143 chr3L 14959971 intergenic not near genes chr3L 14960042 intergenic not near genes chr3L 14960114 intergenic not near genes chr3L_11_14960001 chr3L_14960001 RAL-383 1603 chr3L 14966581 14966633 chr3L 14966683 14966707 17 97 3.5 1.5 2.5 4.9 126 chr3L 14966581 intergenic not near genes chr3L 14966644 intergenic not near genes chr3L 14966707 intergenic not near genes chr3L_17_14965001 chr3L_14965001 RAL-383 1604 chr3L 14970750 14970765 chr3L 14971082 14971097 F-element 6 332 0.0 4.5 2.2 1.9 347 chr3L 14970750 intergenic Tom + chr3L 14970924 intergenic not near genes chr3L 14971097 intergenic not near genes chr3L_6_14970001 chr3L_14970001 RAL-383 1605 chr3L 15085036 15085078 chr3L 15086221 15086255 1360 10 1179 4.0 4.0 4.0 2.0 1219 chr3L 15085036 intron cp309 - chr3L 15085646 intron cp309 - chr3L 15086255 intron cp309 - chr3L_10_15085001 chr3L_15085001 RAL-383 1606 chr3L 15146144 15146171 chr3L 15146240 15146280 5 102 0.0 2.0 1.0 2.5 136 chr3L 15146144 3` UTR Pex3 + chr3L 15146212 3` UTR Pex3 + chr3L 15146280 3` UTR Pex3 + chr3L_5_15145001 chr3L_15145001 RAL-383 1607 chr3L 15166963 15167000 chr3L 15167061 15167108 11 107 3.0 2.5 2.8 2.9 145 chr3L 15166963 intergenic not near genes chr3L 15167036 intergenic not near genes chr3L 15167108 intergenic not near genes chr3L_11_15165001 chr3L_15165001 RAL-383 1608 chr3L 15196840 15196884 chr3L 15196941 15196984 12 101 5.5 4.5 5.0 2.0 144 chr3L 15196840 intergenic not near genes chr3L 15196912 intergenic not near genes chr3L 15196984 intergenic not near genes chr3L_12_15195001 chr3L_15195001 RAL-383 1609 chr3L 15257419 15257431 chr3L 15257652 15257664 4 233 6.0 1.5 3.8 0.8 245 chr3L 15257419 intergenic not near genes chr3L 15257542 intergenic not near genes chr3L 15257664 intergenic not near genes chr3L_4_15255001 chr3L_15255001 RAL-383 1610 chr3L 15295754 15295801 chr3L 15298617 15298664 gypsy5 17 2862 5.5 9.0 7.2 2.1 2910 chr3L 15295754 intergenic not near genes chr3L 15297209 intergenic not near genes chr3L 15298664 intergenic Best4 + chr3L_17_15295001 chr3L_15295001 RAL-383 1611 chr3L 15303184 15303211 chr3L 15303291 15303293 6 103 7.5 1.5 4.5 1.1 109 chr3L 15303184 intergenic Best3 - chr3L 15303238 intergenic Best3 - chr3L 15303293 intergenic not near genes chr3L_6_15300001 chr3L_15300001 RAL-383 1612 chr3L 15327203 15327250 chr3L 15327295 15327340 6 94 4.5 4.0 4.2 1.2 137 chr3L 15327203 intergenic not near genes chr3L 15327272 intergenic not near genes chr3L 15327340 intergenic not near genes chr3L_6_15325001 chr3L_15325001 RAL-383 1613 chr3L 15406011 15406055 chr3L 15406129 15406149 6 106 3.5 3.0 3.2 1.4 138 chr3L 15406011 intergenic not near genes chr3L 15406080 intergenic not near genes chr3L 15406149 intergenic not near genes chr3L_6_15405001 chr3L_15405001 RAL-383 1614 chr3L 15423743 15423773 chr3L 15426607 15426637 opus 7 2864 8.0 2.5 5.2 1.1 2894 chr3L 15423743 intergenic not near genes chr3L 15425190 intergenic not near genes chr3L 15426637 intergenic not near genes chr3L_7_15425001 chr3L_15425001 RAL-383 1615 chr3L 15457160 15457288 chr3L 15457260 15457399 4 108 0.0 0.0 0.0 4.0 239 chr3L 15457160 intergenic CR45395 + chr3L 15457280 intergenic CR45395 + chr3L 15457399 intergenic CR45395 + chr3L_4_15455001 chr3L_15455001 RAL-383 1616 chr3L 15466021 15466029 chr3L 15466123 15466131 6 102 6.5 0.0 3.2 1.4 110 chr3L 15466021 intergenic not near genes chr3L 15466076 intergenic not near genes chr3L 15466131 intergenic not near genes chr3L_6_15465001 chr3L_15465001 RAL-383 1617 chr3L 15493297 15493347 chr3L 15493412 15493462 4 115 1.5 0.0 0.8 2.2 165 chr3L 15493297 exon CG12355 - chr3L 15493380 intron CG12355 - chr3L 15493462 intron CG12355 - chr3L_4_15490001 chr3L_15490001 RAL-383 1618 chr3L 15541598 15541652 chr3L 15541709 15541753 15 109 3.5 1.5 2.5 4.3 155 chr3L 15541598 intron CrebA + chr3L 15541676 intron CrebA + chr3L 15541753 intron CrebA + chr3L_15_15540001 chr3L_15540001 RAL-383 1619 chr3L 15554901 15554945 chr3L 15556708 15556752 S-element 12 1807 6.5 4.5 5.5 1.8 1851 chr3L 15554901 intron AGO2 + chr3L 15555826 intron AGO2 + chr3L 15556752 intron AGO2 + chr3L_12_15555001 chr3L_15555001 RAL-383 1620 chr3L 15584528 15584553 chr3L 15584624 15584649 6 96 3.5 7.0 5.2 1.0 121 chr3L 15584528 intron CG12304 + chr3L 15584588 intron CG12304 + chr3L 15584649 exon CG12304 + chr3L_6_15580001 chr3L_15580001 RAL-383 1621 chr3L 15633163 15633212 chr3L 15633263 15633310 7 100 5.0 1.0 3.0 1.8 147 chr3L 15633163 intron comm3 - chr3L 15633236 intron comm3 - chr3L 15633310 intron comm3 - chr3L_7_15630001 chr3L_15630001 RAL-383 1622 chr3L 15641781 15641814 chr3L 15641886 15641919 6 105 0.0 3.5 1.8 2.1 138 chr3L 15641781 intron comm3 - chr3L 15641850 intron comm3 - chr3L 15641919 intron comm3 - chr3L_6_15640001 chr3L_15640001 RAL-383 1623 chr3L 15658646 15658665 chr3L 15658837 15658856 10 191 6.0 3.0 4.5 1.8 210 chr3L 15658646 intergenic Eig71Eh -,Eig71Eg + chr3L 15658751 intergenic Eig71Eh - chr3L 15658856 intergenic Eig71Eh - chr3L_10_15655001 chr3L_15655001 RAL-383 1624 chr3L 15737371 15737400 chr3L 15737473 15737510 7 107 3.5 2.0 2.8 1.8 139 chr3L 15737371 intergenic not near genes chr3L 15737440 intergenic not near genes chr3L 15737510 intergenic not near genes chr3L_7_15735001 chr3L_15735001 RAL-383 1625 chr3L 15756859 15756911 chr3L 15756962 15756998 12 95 5.0 0.5 2.8 3.2 139 chr3L 15756859 intergenic not near genes chr3L 15756928 intergenic not near genes chr3L 15756998 intergenic not near genes chr3L_12_15755001 chr3L_15755001 RAL-383 1626 chr3L 15769002 15769124 chr3L 15769117 15769236 4 113 0.0 0.0 0.0 4.0 234 chr3L 15769002 intergenic not near genes chr3L 15769119 intergenic not near genes chr3L 15769236 intergenic not near genes chr3L_4_15765001 chr3L_15765001 RAL-383 1627 chr3L 15778497 15778545 chr3L 15778668 15778716 10 171 1.5 1.0 1.2 4.5 219 chr3L 15778497 intergenic not near genes chr3L 15778606 intergenic not near genes chr3L 15778716 intergenic not near genes chr3L_10_15775001 chr3L_15775001 RAL-383 1628 chr3L 15781635 15781671 chr3L 15781786 15781840 4 164 0.0 0.0 0.0 4.0 205 chr3L 15781635 intergenic not near genes chr3L 15781738 intergenic not near genes chr3L 15781840 intergenic not near genes chr3L_4_15780001 chr3L_15780001 RAL-383 1629 chr3L 15784546 15784588 chr3L 15784663 15784666 13 114 3.5 1.0 2.2 4.1 120 chr3L 15784546 intergenic not near genes chr3L 15784606 intergenic not near genes chr3L 15784666 intergenic not near genes chr3L_13_15780001 chr3L_15780001 RAL-383 1630 chr3L 15843043 15843045 chr3L 15843207 15843209 4 164 2.5 4.5 3.5 0.9 166 chr3L 15843043 intron CG32150 - chr3L 15843126 intron CG32150 - chr3L 15843209 intron CG32150 - chr3L_4_15840001 chr3L_15840001 RAL-383 1631 chr3L 15871272 15871319 chr3L 15871496 15871543 16 221 2.5 4.0 3.2 3.8 271 chr3L 15871272 intron pHCl - chr3L 15871408 intron pHCl - chr3L 15871543 intron pHCl - chr3L_16_15870001 chr3L_15870001 RAL-383 1632 chr3L 15871584 15871610 chr3L 15871688 15871714 6 104 3.0 2.5 2.8 1.6 130 chr3L 15871584 intron pHCl - chr3L 15871649 intron pHCl - chr3L 15871714 intron pHCl - chr3L_6_15870001 chr3L_15870001 RAL-383 1633 chr3L 15883173 15883215 chr3L 15883486 15883528 12 310 5.0 2.0 3.5 2.7 355 chr3L 15883173 intron pHCl - chr3L 15883350 intron pHCl - chr3L 15883528 intron pHCl - chr3L_12_15880001 chr3L_15880001 RAL-383 1634 chr3L 15916829 15916858 chr3L 15916926 15916955 8 96 2.0 2.0 2.0 2.7 126 chr3L 15916829 intron sff - chr3L 15916892 intron sff - chr3L 15916955 intron sff - chr3L_8_15915001 chr3L_15915001 RAL-383 1635 chr3L 15929216 15929223 chr3L 15938383 15938390 roo 5 9167 1.0 6.0 3.5 1.1 9174 chr3L 15929216 intron Pka-C3 - chr3L 15933803 intron Pka-C3 - chr3L 15938390 intron Pka-C3 - chr3L_5_15930001 chr3L_15930001 RAL-383 1636 chr3L 16015174 16015222 chr3L 16015272 16015315 14 97 2.5 3.0 2.8 3.7 141 chr3L 16015174 intergenic not near genes chr3L 16015244 intergenic not near genes chr3L 16015315 intergenic not near genes chr3L_14_16015001 chr3L_16015001 RAL-383 1637 chr3L 16047731 16048016 chr3L 16047828 16048112 12 96 2.5 1.5 2.0 4.0 381 chr3L 16047731 intron th - chr3L 16047922 intron th - chr3L 16048112 intron th - chr3L_12_16045001 chr3L_16045001 RAL-383 1638 chr3L 16070726 16070752 chr3L 16070823 16070849 6 97 4.5 5.0 4.8 1.0 123 chr3L 16070726 intron Mbs + chr3L 16070788 intron Mbs + chr3L 16070849 exon Mbs + chr3L_6_16070001 chr3L_16070001 RAL-383 1639 chr3L 16158784 16158836 chr3L 16158889 16158940 16 104 4.0 4.5 4.2 3.1 156 chr3L 16158784 intron CG5151 - chr3L 16158862 intron CG5151 - chr3L 16158940 intron CG5151 - chr3L_16_16155001 chr3L_16155001 RAL-383 1640 chr3L 16184088 16184133 chr3L 16188927 16188972 X-element 10 4838 2.5 2.0 2.2 3.1 4884 chr3L 16184088 intergenic not near genes chr3L 16186530 intergenic not near genes chr3L 16188972 intergenic not near genes chr3L_10_16185001 chr3L_16185001 RAL-383 1641 chr3L 16225367 16225373 chr3L 16225452 16225469 5 93 7.5 3.0 5.2 0.8 102 chr3L 16225367 intergenic not near genes chr3L 16225418 intergenic not near genes chr3L 16225469 intergenic not near genes chr3L_5_16225001 chr3L_16225001 RAL-383 1642 chr3L 16241895 16241920 chr3L 16241984 16242024 5 101 5.0 6.5 5.8 0.7 129 chr3L 16241895 intergenic not near genes chr3L 16241960 intergenic not near genes chr3L 16242024 intergenic not near genes chr3L_5_16240001 chr3L_16240001 RAL-383 1643 chr3L 16359956 16360006 chr3L 16360246 16360279 4 277 0.0 7.0 3.5 0.9 323 chr3L 16359956 intron CG45057 - chr3L 16360118 intron CG45057 - chr3L 16360279 intron CG45057 - chr3L_4_16360001 chr3L_16360001 RAL-383 1644 chr3L 16360867 16360901 chr3L 16360962 16360999 14 96 7.0 4.0 5.5 2.2 132 chr3L 16360867 intron CG45057 - chr3L 16360933 intron CG45057 - chr3L 16360999 intron CG45057 - chr3L_14_16360001 chr3L_16360001 RAL-383 1645 chr3L 16431812 16431862 chr3L 16431926 16431977 11 114 2.0 0.5 1.2 5.0 165 chr3L 16431812 intron,intron CG33158 +,dsx-c73A - chr3L 16431894 intron,intron CG33158 +,dsx-c73A - chr3L 16431977 intron,intron CG33158 +,dsx-c73A - chr3L_11_16430001 chr3L_16430001 RAL-383 1646 chr3L 16443851 16443875 chr3L 16446199 16446211 Doc 7 2354 2.0 5.5 3.8 1.5 2360 chr3L 16443851 intron,intron CG33158 +,dsx-c73A - chr3L 16445031 intron,intron CG33158 +,dsx-c73A - chr3L 16446211 intron,intron CG33158 +,dsx-c73A - chr3L_7_16445001 chr3L_16445001 RAL-383 1647 chr3L 16493960 16494004 chr3L 16494497 16494541 jockey 8 535 5.5 6.5 6.0 1.1 581 chr3L 16493960 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494250 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494541 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_8_16490001 chr3L_16490001 RAL-383 1648 chr3L 16533545 16533586 chr3L 16533676 16533717 6 130 3.0 3.5 3.2 1.4 172 chr3L 16533545 intron CG43373 - chr3L 16533631 intron CG43373 - chr3L 16533717 intron CG43373 - chr3L_6_16530001 chr3L_16530001 RAL-383 1649 chr3L 16540033 16540079 chr3L 16540141 16540184 14 107 4.0 3.0 3.5 3.1 151 chr3L 16540033 intron CG43373 - chr3L 16540108 intron CG43373 - chr3L 16540184 intron CG43373 - chr3L_14_16540001 chr3L_16540001 RAL-383 1650 chr3L 16610664 16610711 chr3L 16610769 16610816 9 105 6.5 2.5 4.5 1.6 152 chr3L 16610664 3` UTR Su(P) - chr3L 16610740 exon Su(P) - chr3L 16610816 exon Su(P) - chr3L_9_16610001 chr3L_16610001 RAL-383 1651 chr3L 16616493 16616542 chr3L 16621840 16621890 297 14 5346 4.0 5.5 4.8 2.4 5397 chr3L 16616493 3` UTR Abl - chr3L 16619192 3` UTR Abl - chr3L 16621890 3` UTR Abl - chr3L_14_16615001 chr3L_16615001 RAL-383 1652 chr3L 16681841 16681880 chr3L 16681952 16681991 7 109 6.5 1.0 3.8 1.5 150 chr3L 16681841 intron,intron Lasp -,CG43954 - chr3L 16681916 intron,intron Lasp -,CG43954 - chr3L 16681991 intron,intron Lasp -,CG43954 - chr3L_7_16680001 chr3L_16680001 RAL-383 1653 chr3L 16684002 16684040 chr3L 16689243 16689281 copia 11 5241 3.0 4.5 3.8 2.3 5279 chr3L 16684002 intron,intron Lasp -,CG43954 - chr3L 16686642 intron,intron Lasp -,CG43954 - chr3L 16689281 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_11_16685001 chr3L_16685001 RAL-383 1654 chr3L 16743930 16743979 chr3L 16744064 16744108 10 132 6.5 2.0 4.2 1.9 178 chr3L 16743930 intergenic not near genes chr3L 16744019 intergenic not near genes chr3L 16744108 intergenic not near genes chr3L_10_16740001 chr3L_16740001 RAL-383 1655 chr3L 16772481 16772502 chr3L 16772591 16772598 5 106 8.5 1.5 5.0 0.8 117 chr3L 16772481 intron Nrt + chr3L 16772540 intron Nrt + chr3L 16772598 intron Nrt + chr3L_5_16770001 chr3L_16770001 RAL-383 1656 chr3L 16805020 16805042 chr3L 16805133 16805165 7 127 2.0 1.0 1.5 2.8 145 chr3L 16805020 intron,5` UTR CG9674 -,nudC + chr3L 16805092 intron,5` UTR CG9674 -,nudC + chr3L 16805165 intron,5` UTR CG9674 -,nudC + chr3L_7_16805001 chr3L_16805001 RAL-383 1657 chr3L 16808019 16808045 chr3L 16808115 16808141 9 95 5.5 1.0 3.2 2.1 122 chr3L 16808019 intron nudC + chr3L 16808080 intron nudC + chr3L 16808141 intron nudC + chr3L_9_16805001 chr3L_16805001 RAL-383 1658 chr3L 16815835 16815885 chr3L 16815941 16815988 9 105 0.0 5.0 2.5 2.6 153 chr3L 16815835 intron,intron nudC +,CG13024 - chr3L 16815912 intron,intron nudC +,CG13024 - chr3L 16815988 intron,intron nudC +,CG13024 - chr3L_9_16815001 chr3L_16815001 RAL-383 1659 chr3L 16818726 16818777 chr3L 16818822 16818873 15 95 4.5 1.5 3.0 3.8 147 chr3L 16818726 intron,intron nudC +,CG13024 - chr3L 16818800 intron,intron nudC +,CG13024 - chr3L 16818873 intron,intron nudC +,CG13024 - chr3L_15_16815001 chr3L_16815001 RAL-383 1660 chr3L 16826195 16826226 chr3L 16826496 16826522 6 300 7.0 4.5 5.8 0.9 327 chr3L 16826195 intron CG13024 - chr3L 16826358 intron CG13024 - chr3L 16826522 intron CG13024 - chr3L_6_16825001 chr3L_16825001 RAL-383 1661 chr3L 16867743 16867791 chr3L 16867962 16868010 16 219 4.0 4.5 4.2 3.1 267 chr3L 16867743 intron Lmpt + chr3L 16867876 intron Lmpt + chr3L 16868010 intron Lmpt + chr3L_16_16865001 chr3L_16865001 RAL-383 1662 chr3L 16869560 16869605 chr3L 16869660 16869707 14 102 1.5 5.0 3.2 3.3 147 chr3L 16869560 intron Lmpt + chr3L 16869634 intron Lmpt + chr3L 16869707 intron Lmpt + chr3L_14_16865001 chr3L_16865001 RAL-383 1663 chr3L 16941382 16941421 chr3L 16941503 16941542 11 120 3.5 0.0 1.8 3.9 160 chr3L 16941382 intron Cpr73D - chr3L 16941462 intron Cpr73D - chr3L 16941542 intron Cpr73D - chr3L_11_16940001 chr3L_16940001 RAL-383 1664 chr3L 16945717 16945748 chr3L 16954890 16954893 roo 5 9165 4.5 2.0 3.2 1.2 9176 chr3L 16945717 exon Obp73a + chr3L 16950305 intergenic not near genes chr3L 16954893 5` UTR Nc73EF + chr3L_5_16950001 chr3L_16950001 RAL-383 1665 chr3L 16945754 16945757 chr3L 16954886 16954910 roo 5 9144 4.5 2.0 3.2 1.2 9156 chr3L 16945754 exon Obp73a + chr3L 16950332 intergenic not near genes chr3L 16954910 5` UTR Nc73EF + chr3L_5_16950001 chr3L_16950001 RAL-383 1666 chr3L 17003780 17003801 chr3L 17003868 17003873 4 86 2.0 2.5 2.2 1.2 93 chr3L 17003780 intron CG3764 - chr3L 17003826 intron CG3764 - chr3L 17003873 intron CG3764 - chr3L_4_17000001 chr3L_17000001 RAL-383 1667 chr3L 17034916 17034958 chr3L 17035124 17035166 G2 10 208 0.5 2.0 1.2 4.5 250 chr3L 17034916 intergenic not near genes chr3L 17035041 intergenic not near genes chr3L 17035166 intergenic not near genes chr3L_10_17035001 chr3L_17035001 RAL-383 1668 chr3L 17084984 17085026 chr3L 17094153 17094195 roo 19 9169 5.0 6.0 5.5 2.9 9211 chr3L 17084984 intron Rbp6 - chr3L 17089590 intron Rbp6 - chr3L 17094195 intron Rbp6 - chr3L_19_17085001 chr3L_17085001 RAL-383 1669 chr3L 17142720 17142759 chr3L 17142968 17143007 8 248 4.0 4.0 4.0 1.6 287 chr3L 17142720 intron Rbp6 - chr3L 17142864 intron Rbp6 - chr3L 17143007 intron Rbp6 - chr3L_8_17140001 chr3L_17140001 RAL-383 1670 chr3L 17146936 17146966 chr3L 17147038 17147068 7 102 6.5 1.0 3.8 1.5 132 chr3L 17146936 intron Rbp6 - chr3L 17147002 intron Rbp6 - chr3L 17147068 intron Rbp6 - chr3L_7_17145001 chr3L_17145001 RAL-383 1671 chr3L 17149144 17149182 chr3L 17149245 17149265 10 95 3.5 0.0 1.8 3.6 121 chr3L 17149144 intron Rbp6 - chr3L 17149204 intron Rbp6 - chr3L 17149265 intron Rbp6 - chr3L_10_17145001 chr3L_17145001 RAL-383 1672 chr3L 17298288 17298330 chr3L 17298391 17298400 11 102 4.5 4.5 4.5 2.0 112 chr3L 17298288 intergenic not near genes chr3L 17298344 intergenic not near genes chr3L 17298400 intergenic not near genes chr3L_11_17295001 chr3L_17295001 RAL-383 1673 chr3L 17331047 17331094 chr3L 17331157 17331204 14 110 2.0 3.0 2.5 4.0 157 chr3L 17331047 intergenic not near genes chr3L 17331126 intergenic not near genes chr3L 17331204 intergenic not near genes chr3L_14_17330001 chr3L_17330001 RAL-383 1674 chr3L 17358036 17358059 chr3L 17358150 17358174 4 115 6.5 4.0 5.2 0.6 138 chr3L 17358036 3` UTR CG7692 + chr3L 17358105 intergenic CG7692 + chr3L 17358174 intergenic CG7692 + chr3L_4_17355001 chr3L_17355001 RAL-383 1675 chr3L 17367415 17367458 chr3L 17367529 17367572 12 114 4.5 1.5 3.0 3.0 157 chr3L 17367415 intergenic CR45688 +,Cad74A - chr3L 17367494 intergenic CR45688 +,Cad74A - chr3L 17367572 intergenic Cad74A -,CR45688 + chr3L_12_17365001 chr3L_17365001 RAL-383 1676 chr3L 17488046 17488093 chr3L 17488148 17488195 18 101 3.0 3.0 3.0 4.5 149 chr3L 17488046 intron Oatp74D + chr3L 17488120 5` UTR Oatp74D + chr3L 17488195 5` UTR Oatp74D + chr3L_18_17485001 chr3L_17485001 RAL-383 1677 chr3L 17498107 17498111 chr3L 17498178 17498208 4 90 4.5 1.5 3.0 1.0 101 chr3L 17498107 intron Oatp74D + chr3L 17498158 intron Oatp74D + chr3L 17498208 intron Oatp74D + chr3L_4_17495001 chr3L_17495001 RAL-383 1678 chr3L 17510731 17510762 chr3L 17510816 17510863 6 100 2.0 1.5 1.8 2.1 132 chr3L 17510731 exon Oatp74D + chr3L 17510797 intron Oatp74D + chr3L 17510863 intron Oatp74D + chr3L_6_17510001 chr3L_17510001 RAL-383 1679 chr3L 17516974 17517005 chr3L 17524545 17524579 412 4 7574 6.5 5.0 5.8 0.6 7605 chr3L 17516974 intron CG7564 + chr3L 17520776 intron CG7564 + chr3L 17524579 3` UTR CG7564 + chr3L_4_17520001 chr3L_17520001 RAL-383 1680 chr3L 17537761 17537801 chr3L 17537847 17537899 10 95 4.0 1.5 2.8 2.6 138 chr3L 17537761 intron Nedd4 + chr3L 17537830 intron Nedd4 + chr3L 17537899 intron Nedd4 + chr3L_10_17535001 chr3L_17535001 RAL-383 1681 chr3L 17578523 17578532 chr3L 17578644 17578653 4 121 10.0 0.0 5.0 0.7 130 chr3L 17578523 intron Eip74EF - chr3L 17578588 intron Eip74EF - chr3L 17578653 intron Eip74EF - chr3L_4_17575001 chr3L_17575001 RAL-383 1682 chr3L 17583532 17583543 chr3L 17583640 17583657 4 112 4.0 6.5 5.2 0.6 125 chr3L 17583532 intron Eip74EF - chr3L 17583594 intron Eip74EF - chr3L 17583657 intron Eip74EF - chr3L_4_17580001 chr3L_17580001 RAL-383 1683 chr3L 17586945 17587001 chr3L 17587099 17587155 19 154 2.5 3.0 2.8 5.0 210 chr3L 17586945 intron Eip74EF - chr3L 17587050 intron Eip74EF - chr3L 17587155 intron Eip74EF - chr3L_19_17585001 chr3L_17585001 RAL-383 1684 chr3L 17592767 17592819 chr3L 17592878 17592930 21 111 2.0 3.5 2.8 5.5 163 chr3L 17592767 intron Eip74EF - chr3L 17592848 intron Eip74EF - chr3L 17592930 intron Eip74EF - chr3L_21_17590001 chr3L_17590001 RAL-383 1685 chr3L 17594232 17594250 chr3L 17594330 17594351 4 100 10.5 5.0 7.8 0.5 119 chr3L 17594232 intron Eip74EF - chr3L 17594292 intron Eip74EF - chr3L 17594351 intron Eip74EF - chr3L_4_17590001 chr3L_17590001 RAL-383 1686 chr3L 17594251 17594266 chr3L 17594321 17594367 4 86 6.0 2.5 4.2 0.8 116 chr3L 17594251 intron Eip74EF - chr3L 17594309 intron Eip74EF - chr3L 17594367 intron Eip74EF - chr3L_4_17590001 chr3L_17590001 RAL-383 1687 chr3L 17717974 17718011 chr3L 17718268 17718305 10 292 4.5 3.5 4.0 2.0 331 chr3L 17717974 intron Ccn + chr3L 17718140 intron Ccn + chr3L 17718305 intron Ccn + chr3L_10_17715001 chr3L_17715001 RAL-383 1688 chr3L 17730838 17730879 chr3L 17738188 17738229 mdg1 10 7350 7.5 4.5 6.0 1.4 7391 chr3L 17730838 intron Ccn + chr3L 17734534 intron Ccn + chr3L 17738229 intron Ccn + chr3L_10_17730001 chr3L_17730001 RAL-383 1689 chr3L 17753332 17753358 chr3L 17753438 17753464 9 106 3.5 5.5 4.5 1.6 132 chr3L 17753332 intron Adgf-A - chr3L 17753398 intron Adgf-A - chr3L 17753464 intron Adgf-A - chr3L_9_17750001 chr3L_17750001 RAL-383 1690 chr3L 17790606 17790636 chr3L 17790891 17790921 12 282 1.0 4.5 2.8 3.2 315 chr3L 17790606 intergenic CG42815 - chr3L 17790764 intergenic CG42815 - chr3L 17790921 intergenic CG42815 - chr3L_12_17790001 chr3L_17790001 RAL-383 1691 chr3L 17821001 17821046 chr3L 17821106 17821151 14 103 2.5 3.0 2.8 3.7 150 chr3L 17821001 exon Ir75c - chr3L 17821076 intron Ir75c - chr3L 17821151 intron Ir75c - chr3L_14_17820001 chr3L_17820001 RAL-383 1692 chr3L 17825316 17825335 chr3L 17825404 17825431 8 99 2.5 4.5 3.5 1.8 115 chr3L 17825316 intron Grd + chr3L 17825374 intron Grd + chr3L 17825431 intron Grd + chr3L_8_17825001 chr3L_17825001 RAL-383 1693 chr3L 17834309 17834354 chr3L 17834493 17834538 4 183 0.0 3.5 1.8 1.4 229 chr3L 17834309 intron Grd + chr3L 17834424 intron Grd + chr3L 17834538 intron Grd + chr3L_4_17830001 chr3L_17830001 RAL-383 1694 chr3L 17837610 17837626 chr3L 17837715 17837734 6 108 3.0 3.0 3.0 1.5 124 chr3L 17837610 exon Grd + chr3L 17837672 intron Grd + chr3L 17837734 intron Grd + chr3L_6_17835001 chr3L_17835001 RAL-383 1695 chr3L 17837634 17837655 chr3L 17837711 17837758 10 102 1.5 3.0 2.2 3.1 124 chr3L 17837634 exon Grd + chr3L 17837696 intron Grd + chr3L 17837758 exon Grd + chr3L_10_17835001 chr3L_17835001 RAL-383 1696 chr3L 17884687 17884709 chr3L 17884807 17884829 6 120 5.5 5.0 5.2 1.0 142 chr3L 17884687 intergenic CG5506 - chr3L 17884758 intergenic CG5506 - chr3L 17884829 intergenic CG5506 - chr3L_6_17880001 chr3L_17880001 RAL-383 1697 chr3L 17887857 17887874 chr3L 17887962 17887979 4 105 3.0 9.0 6.0 0.6 122 chr3L 17887857 intron CG7402 + chr3L 17887918 intron CG7402 + chr3L 17887979 intron CG7402 + chr3L_4_17885001 chr3L_17885001 RAL-383 1698 chr3L 17918374 17918398 chr3L 17921192 17921221 opus 5 2821 2.0 4.0 3.0 1.2 2847 chr3L 17918374 intergenic not near genes chr3L 17919798 intergenic not near genes chr3L 17921221 intergenic not near genes chr3L_5_17915001 chr3L_17915001 RAL-383 1699 chr3L 17991560 17991576 chr3L 17991658 17991674 5 98 9.0 5.5 7.2 0.6 114 chr3L 17991560 intron Eip75B - chr3L 17991617 intron Eip75B - chr3L 17991674 intron Eip75B - chr3L_5_17990001 chr3L_17990001 RAL-383 1700 chr3L 18000653 18000701 chr3L 18000749 18000798 16 95 4.5 3.5 4.0 3.2 145 chr3L 18000653 intron Eip75B - chr3L 18000726 intron Eip75B - chr3L 18000798 intron Eip75B - chr3L_16_18000001 chr3L_18000001 RAL-383 1701 chr3L 18013953 18013982 chr3L 18014062 18014071 4 104 3.5 0.0 1.8 1.4 118 chr3L 18013953 intron Eip75B - chr3L 18014012 intron Eip75B - chr3L 18014071 intron Eip75B - chr3L_4_18010001 chr3L_18010001 RAL-383 1702 chr3L 18014788 18014815 chr3L 18015073 18015100 10 284 3.0 6.0 4.5 1.8 312 chr3L 18014788 intron Eip75B - chr3L 18014944 intron Eip75B - chr3L 18015100 intron Eip75B - chr3L_10_18010001 chr3L_18010001 RAL-383 1703 chr3L 18047691 18047728 chr3L 18056768 18056804 roo 11 9076 3.5 3.5 3.5 2.4 9113 chr3L 18047691 intron Eip75B - chr3L 18052248 intron Eip75B - chr3L 18056804 intron Eip75B - chr3L_11_18050001 chr3L_18050001 RAL-383 1704 chr3L 18075224 18075253 chr3L 18075509 18075538 11 285 5.0 4.0 4.5 2.0 314 chr3L 18075224 intergenic not near genes chr3L 18075381 intergenic not near genes chr3L 18075538 intergenic not near genes chr3L_11_18075001 chr3L_18075001 RAL-383 1705 chr3L 18106236 18106274 chr3L 18106370 18106413 8 132 2.0 0.0 1.0 4.0 177 chr3L 18106236 intergenic CG13698 -,mRpS26 + chr3L 18106324 intergenic CG13698 -,mRpS26 + chr3L 18106413 intergenic mRpS26 +,CG13698 - chr3L_8_18105001 chr3L_18105001 RAL-383 1706 chr3L 18107594 18107647 chr3L 18107707 18107729 16 111 2.5 2.5 2.5 4.6 135 chr3L 18107594 intergenic mRpS26 +,CG5147 - chr3L 18107662 intergenic mRpS26 +,CG5147 - chr3L 18107729 intergenic CG5147 -,mRpS26 + chr3L_16_18105001 chr3L_18105001 RAL-383 1707 chr3L 18124404 18124427 chr3L 18124508 18124531 7 104 4.5 5.0 4.8 1.2 127 chr3L 18124404 intergenic not near genes chr3L 18124468 intergenic not near genes chr3L 18124531 intergenic not near genes chr3L_7_18120001 chr3L_18120001 RAL-383 1708 chr3L 18129829 18129855 chr3L 18129933 18129959 8 104 2.0 1.5 1.8 2.9 130 chr3L 18129829 3` UTR Cyp312a1 - chr3L 18129894 3` UTR Cyp312a1 - chr3L 18129959 3` UTR Cyp312a1 - chr3L_8_18125001 chr3L_18125001 RAL-383 1709 chr3L 18175797 18175824 chr3L 18175895 18175921 8 96 5.5 6.0 5.8 1.2 124 chr3L 18175797 intron W - chr3L 18175859 intron W - chr3L 18175921 intron W - chr3L_8_18175001 chr3L_18175001 RAL-383 1710 chr3L 18180938 18180983 chr3L 18181041 18181090 7 103 2.5 1.5 2.0 2.3 152 chr3L 18180938 intron W - chr3L 18181014 intron W - chr3L 18181090 intron W - chr3L_7_18180001 chr3L_18180001 RAL-383 1711 chr3L 18198930 18198931 chr3L 24821492 24821494 14 6622563 0.5 15.5 8.0 1.6 6622564 chr3L 18198930 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821494 intergenic not near genes chr3L_14_21510001 chr3L_21510001 RAL-383 1712 chr3L 18203577 18203629 chr3L 18203691 18203732 8 110 5.0 0.0 2.5 2.3 155 chr3L 18203577 3` UTR CG7320 + chr3L 18203654 intergenic CG7320 + chr3L 18203732 intergenic CG7320 + chr3L_8_18200001 chr3L_18200001 RAL-383 1713 chr3L 18207893 18207902 chr3L 18207998 18208007 5 105 2.5 0.0 1.2 2.3 114 chr3L 18207893 intergenic not near genes chr3L 18207950 intergenic not near genes chr3L 18208007 intergenic not near genes chr3L_5_18205001 chr3L_18205001 RAL-383 1714 chr3L 18225267 18225306 chr3L 18225363 18225402 18 96 0.5 0.5 0.5 12.0 135 chr3L 18225267 intergenic not near genes chr3L 18225334 intergenic not near genes chr3L 18225402 intergenic not near genes chr3L_18_18225001 chr3L_18225001 RAL-383 1715 chr3L 18248938 18248984 chr3L 18249056 18249097 13 118 3.5 3.5 3.5 2.9 159 chr3L 18248938 intergenic not near genes chr3L 18249018 intergenic not near genes chr3L 18249097 intergenic not near genes chr3L_13_18245001 chr3L_18245001 RAL-383 1716 chr3L 18262465 18262485 chr3L 18262571 18262591 11 106 6.5 6.5 6.5 1.5 126 chr3L 18262465 intergenic not near genes chr3L 18262528 intergenic not near genes chr3L 18262591 intergenic not near genes chr3L_11_18260001 chr3L_18260001 RAL-383 1717 chr3L 18267841 18267981 chr3L 18267938 18268070 22 94 1.0 0.5 0.8 12.2 229 chr3L 18267841 intergenic not near genes chr3L 18267956 intergenic not near genes chr3L 18268070 intergenic not near genes chr3L_22_18265001 chr3L_18265001 RAL-383 1718 chr3L 18342431 18342454 chr3L 18342530 18342546 4 98 5.5 3.0 4.2 0.8 115 chr3L 18342431 intergenic not near genes chr3L 18342488 intergenic not near genes chr3L 18342546 intergenic not near genes chr3L_4_18340001 chr3L_18340001 RAL-383 1719 chr3L 18373361 18373378 chr3L 18373464 18373481 9 103 0.0 2.5 1.2 4.1 120 chr3L 18373361 intergenic not near genes chr3L 18373421 intergenic not near genes chr3L 18373481 intergenic not near genes chr3L_9_18370001 chr3L_18370001 RAL-383 1720 chr3L 18383118 18383134 chr3L 18383220 18383236 7 102 0.0 2.0 1.0 3.5 118 chr3L 18383118 intergenic not near genes chr3L 18383177 intergenic not near genes chr3L 18383236 intergenic not near genes chr3L_7_18380001 chr3L_18380001 RAL-383 1721 chr3L 18401634 18401647 chr3L 18401733 18401746 5 99 1.5 1.0 1.2 2.3 112 chr3L 18401634 intergenic not near genes chr3L 18401690 intergenic not near genes chr3L 18401746 intergenic not near genes chr3L_5_18400001 chr3L_18400001 RAL-383 1722 chr3L 18408720 18408747 chr3L 18408826 18408853 8 106 5.0 4.5 4.8 1.4 133 chr3L 18408720 intergenic not near genes chr3L 18408786 intergenic not near genes chr3L 18408853 intergenic not near genes chr3L_8_18405001 chr3L_18405001 RAL-383 1723 chr3L 9013689 9013697 chr3L 18417066 18417066 6 9403374 14.0 15.5 14.8 0.4 9403377 chr3L 9013689 intron Doc2 - chr3L 13715378 intron bru-3 - chr3L 18417066 intergenic not near genes chr3L_6_13715001 chr3L_13715001 RAL-383 1724 chr3L 18436040 18436092 chr3L 18436157 18436210 11 118 0.0 4.0 2.0 3.7 170 chr3L 18436040 intergenic not near genes chr3L 18436125 intergenic not near genes chr3L 18436210 intergenic not near genes chr3L_11_18435001 chr3L_18435001 RAL-383 1725 chr3L 18445228 18445283 chr3L 18445326 18445357 10 93 2.5 0.5 1.5 4.0 129 chr3L 18445228 intergenic not near genes chr3L 18445292 intergenic not near genes chr3L 18445357 intergenic not near genes chr3L_10_18445001 chr3L_18445001 RAL-383 1726 chr3L 18448605 18448620 chr3L 18448717 18448732 5 112 9.0 7.0 8.0 0.6 127 chr3L 18448605 intergenic not near genes chr3L 18448668 intergenic not near genes chr3L 18448732 intergenic not near genes chr3L_5_18445001 chr3L_18445001 RAL-383 1727 chr3L 18456252 18456293 chr3L 18456360 18456401 7 105 3.0 4.5 3.8 1.5 149 chr3L 18456252 intergenic CR44670 - chr3L 18456326 intergenic CR44670 - chr3L 18456401 3` UTR CR44670 - chr3L_7_18455001 chr3L_18455001 RAL-383 1728 chr3L 18506119 18506162 chr3L 18509602 18509639 F-element 11 3482 4.5 4.5 4.5 2.0 3520 chr3L 18506119 intergenic not near genes chr3L 18507879 intergenic not near genes chr3L 18509639 intergenic not near genes chr3L_11_18505001 chr3L_18505001 RAL-383 1729 chr3L 18514877 18514940 chr3L 18520091 18520151 BS 10 5212 4.5 4.5 4.5 1.8 5274 chr3L 18514877 intergenic not near genes chr3L 18517514 intergenic not near genes chr3L 18520151 intergenic not near genes chr3L_10_18515001 chr3L_18515001 RAL-383 1730 chr3L 18528608 18528657 chr3L 18537789 18537838 roo 18 9180 4.0 2.0 3.0 4.5 9230 chr3L 18528608 intergenic not near genes chr3L 18533223 intergenic not near genes chr3L 18537838 intergenic not near genes chr3L_18_18530001 chr3L_18530001 RAL-383 1731 chr3L 18549032 18549082 chr3L 18549301 18549351 9 265 7.0 3.5 5.2 1.5 319 chr3L 18549032 intergenic not near genes chr3L 18549192 intergenic not near genes chr3L 18549351 intergenic not near genes chr3L_9_18545001 chr3L_18545001 RAL-383 1732 chr3L 18593937 18593982 chr3L 18595933 18595985 Doc 10 2000 4.5 2.0 3.2 2.4 2048 chr3L 18593937 intergenic term - chr3L 18594961 intergenic not near genes chr3L 18595985 intergenic CR45389 + chr3L_10_18590001 chr3L_18590001 RAL-383 1733 chr3L 18606759 18606782 chr3L 18606954 18606990 7 208 3.5 3.0 3.2 1.7 231 chr3L 18606759 intron,intron,exon CG13380 -,CG4174 -,CG18233 + chr3L 18606874 intron,intron,exon CG13380 -,CG4174 -,CG18233 + chr3L 18606990 intron,intron,intron CG13380 -,CG4174 -,CG18233 + chr3L_7_18605001 chr3L_18605001 RAL-383 1734 chr3L 18649638 18649659 chr3L 18650021 18650042 7 383 0.5 3.0 1.8 2.5 404 chr3L 18649638 intron MYPT-75D + chr3L 18649840 intron MYPT-75D + chr3L 18650042 intron MYPT-75D + chr3L_7_18645001 chr3L_18645001 RAL-383 1735 chr3L 18679653 18679660 chr3L 18679779 18679786 4 125 5.0 5.0 5.0 0.7 133 chr3L 18679653 intergenic not near genes chr3L 18679720 intergenic not near genes chr3L 18679786 intergenic not near genes chr3L_4_18675001 chr3L_18675001 RAL-383 1736 chr3L 18679662 18679686 chr3L 18679778 18679812 11 121 3.5 5.0 4.2 2.1 150 chr3L 18679662 intergenic not near genes chr3L 18679737 intergenic not near genes chr3L 18679812 intergenic not near genes chr3L_11_18675001 chr3L_18675001 RAL-383 1737 chr3L 18679687 18679704 chr3L 18679776 18679829 8 118 1.0 5.0 3.0 2.0 142 chr3L 18679687 intergenic not near genes chr3L 18679758 intergenic not near genes chr3L 18679829 intergenic not near genes chr3L_8_18675001 chr3L_18675001 RAL-383 1738 chr3L 18701121 18701149 chr3L 18701229 18701257 4 108 3.0 1.0 2.0 1.3 136 chr3L 18701121 intergenic not near genes chr3L 18701189 intergenic not near genes chr3L 18701257 intergenic not near genes chr3L_4_18700001 chr3L_18700001 RAL-383 1739 chr3L 18710743 18710788 chr3L 18718715 18718760 Stalker2 12 7970 3.0 8.0 5.5 1.8 8017 chr3L 18710743 intergenic not near genes chr3L 18714752 intergenic not near genes chr3L 18718760 intergenic not near genes chr3L_12_18710001 chr3L_18710001 RAL-383 1740 chr3L 18721765 18721804 chr3L 18721876 18721915 11 111 2.5 2.5 2.5 3.1 150 chr3L 18721765 intergenic CG12477 - chr3L 18721840 intergenic CG12477 - chr3L 18721915 3` UTR CG12477 - chr3L_11_18720001 chr3L_18720001 RAL-383 1741 chr3L 18725048 18725076 chr3L 18725684 18725712 9 635 3.0 4.0 3.5 2.0 664 chr3L 18725048 intergenic not near genes chr3L 18725380 intergenic not near genes chr3L 18725712 intergenic not near genes chr3L_9_18725001 chr3L_18725001 RAL-383 1742 chr3L 18736043 18736057 chr3L 18736158 18736172 5 115 5.0 4.5 4.8 0.9 129 chr3L 18736043 intergenic not near genes chr3L 18736108 intergenic not near genes chr3L 18736172 intergenic not near genes chr3L_5_18735001 chr3L_18735001 RAL-383 1743 chr3L 18753527 18753564 chr3L 18753629 18753666 10 102 2.0 5.0 3.5 2.2 139 chr3L 18753527 intron ftz-f1 - chr3L 18753596 intron ftz-f1 - chr3L 18753666 intron ftz-f1 - chr3L_10_18750001 chr3L_18750001 RAL-383 1744 chr3L 18772390 18772422 chr3L 18781091 18781123 roo 17 8701 8.0 4.5 6.2 2.4 8733 chr3L 18772390 intron ftz-f1 - chr3L 18776756 intron ftz-f1 - chr3L 18781123 intron ftz-f1 - chr3L_17_18775001 chr3L_18775001 RAL-383 1745 chr3L 18833770 18833780 chr3L 18834954 18834964 1360 4 1182 9.0 5.0 7.0 0.5 1194 chr3L 18833770 intron Indy - chr3L 18834367 intron Indy - chr3L 18834964 intron Indy - chr3L_4_18830001 chr3L_18830001 RAL-383 1746 chr3L 18833787 18833807 chr3L 18834941 18834991 1360 7 1178 6.0 2.0 4.0 1.4 1204 chr3L 18833787 intron Indy - chr3L 18834389 intron Indy - chr3L 18834991 intron Indy - chr3L_7_18830001 chr3L_18830001 RAL-383 1747 chr3L 18840847 18840893 chr3L 18841008 18841051 7 161 0.0 3.5 1.8 2.5 204 chr3L 18840847 intron Indy - chr3L 18840949 intron Indy - chr3L 18841051 intron Indy - chr3L_7_18840001 chr3L_18840001 RAL-383 1748 chr3L 18847260 18847276 chr3L 18847370 18847386 8 108 0.5 2.0 1.2 3.6 126 chr3L 18847260 intergenic not near genes chr3L 18847323 intergenic not near genes chr3L 18847386 intergenic not near genes chr3L_8_18845001 chr3L_18845001 RAL-383 1749 chr3L 18853987 18854012 chr3L 18854109 18854133 8 121 4.0 1.5 2.8 2.1 146 chr3L 18853987 intergenic CR45387 + chr3L 18854060 intergenic CR45387 + chr3L 18854133 intergenic CR45387 + chr3L_8_18850001 chr3L_18850001 RAL-383 1750 chr3L 18868942 18868980 chr3L 18869064 18869102 12 122 3.5 6.0 4.8 2.1 160 chr3L 18868942 3` UTR Dysb + chr3L 18869022 3` UTR Dysb + chr3L 18869102 3` UTR Dysb + chr3L_12_18865001 chr3L_18865001 RAL-383 1751 chr3L 18885968 18886015 chr3L 18886064 18886111 12 96 0.0 4.0 2.0 4.0 143 chr3L 18885968 intron CG3961 - chr3L 18886040 intron CG3961 - chr3L 18886111 intron CG3961 - chr3L_12_18885001 chr3L_18885001 RAL-383 1752 chr3L 18887283 18887323 chr3L 18887409 18887449 14 126 4.5 1.0 2.8 3.7 166 chr3L 18887283 intron CG3961 - chr3L 18887366 intron CG3961 - chr3L 18887449 intron CG3961 - chr3L_14_18885001 chr3L_18885001 RAL-383 1753 chr3L 18888242 18888286 chr3L 18888340 18888391 10 104 3.0 4.0 3.5 2.2 149 chr3L 18888242 intron CG3961 - chr3L 18888316 intron CG3961 - chr3L 18888391 intron CG3961 - chr3L_10_18885001 chr3L_18885001 RAL-383 1754 chr3L 18924460 18924482 chr3L 18924556 18924578 8 96 6.0 3.0 4.5 1.5 118 chr3L 18924460 intron CG32204 - chr3L 18924519 intron CG32204 - chr3L 18924578 intron CG32204 - chr3L_8_18920001 chr3L_18920001 RAL-383 1755 chr3L 18933076 18933088 chr3L 18933181 18933193 5 105 7.5 4.0 5.8 0.7 117 chr3L 18933076 intron CG32204 - chr3L 18933134 intron CG32204 - chr3L 18933193 intron CG32204 - chr3L_5_18930001 chr3L_18930001 RAL-383 1756 chr3L 18933090 18933119 chr3L 18933180 18933218 6 101 2.5 4.0 3.2 1.4 128 chr3L 18933090 intron CG32204 - chr3L 18933154 intron CG32204 - chr3L 18933218 intron CG32204 - chr3L_6_18930001 chr3L_18930001 RAL-383 1757 chr3L 18933609 18933656 chr3L 18933723 18933769 8 112 4.5 2.5 3.5 1.8 160 chr3L 18933609 intron CG32204 - chr3L 18933689 intron CG32204 - chr3L 18933769 intron CG32204 - chr3L_8_18930001 chr3L_18930001 RAL-383 1758 chr3L 18938027 18938073 chr3L 18938161 18938201 15 130 4.5 2.5 3.5 3.3 174 chr3L 18938027 intron CG32204 - chr3L 18938114 intron CG32204 - chr3L 18938201 intron CG32204 - chr3L_15_18935001 chr3L_18935001 RAL-383 1759 chr3L 18969583 18969622 chr3L 18969694 18969738 7 110 4.5 4.5 4.5 1.3 155 chr3L 18969583 intergenic not near genes chr3L 18969660 intergenic not near genes chr3L 18969738 intergenic not near genes chr3L_7_18965001 chr3L_18965001 RAL-383 1760 chr3L 19008838 19008874 chr3L 19009183 19009189 jockey 7 345 4.5 3.5 4.0 1.4 351 chr3L 19008838 intron nkd - chr3L 19009014 intron nkd - chr3L 19009189 intron nkd - chr3L_7_19005001 chr3L_19005001 RAL-383 1761 chr3L 19015157 19015213 chr3L 19015261 19015313 6 103 0.0 2.5 1.2 2.7 156 chr3L 19015157 intron nkd - chr3L 19015235 intron nkd - chr3L 19015313 intron nkd - chr3L_6_19015001 chr3L_19015001 RAL-383 1762 chr3L 19100464 19100510 chr3L 19101107 19101153 21 645 29.5 22.0 25.8 0.8 689 chr3L 19100464 intergenic Gem2 - chr3L 19100808 intergenic Gem2 - chr3L 19101153 intergenic not near genes chr3L_21_19100001 chr3L_19100001 RAL-383 1763 chr3L 19115616 19115658 chr3L 19115816 19115848 BS 9 196 4.5 4.0 4.2 1.7 232 chr3L 19115616 intron CG14082 - chr3L 19115732 intron CG14082 - chr3L 19115848 intron CG14082 - chr3L_9_19115001 chr3L_19115001 RAL-383 1764 chr3L 19117030 19117048 chr3L 19124489 19124492 mdg1 4 7456 12.0 3.0 7.5 0.5 7462 chr3L 19117030 intron CG14082 - chr3L 19120761 intron CG14082 - chr3L 19124492 intron CG14082 - chr3L_4_19120001 chr3L_19120001 RAL-383 1765 chr3L 19117049 19117073 chr3L 19124488 19124540 mdg1 9 7457 6.0 3.0 4.5 1.6 7491 chr3L 19117049 intron CG14082 - chr3L 19120794 intron CG14082 - chr3L 19124540 intron CG14082 - chr3L_9_19120001 chr3L_19120001 RAL-383 1766 chr3L 19182371 19182419 chr3L 19182472 19182520 16 100 2.5 2.5 2.5 4.6 149 chr3L 19182371 intron fz2 - chr3L 19182446 intron fz2 - chr3L 19182520 intron fz2 - chr3L_16_19180001 chr3L_19180001 RAL-383 1767 chr3L 19208049 19208091 chr3L 19209442 19209485 Doc 11 1388 2.5 3.0 2.8 2.9 1436 chr3L 19208049 intron fz2 - chr3L 19208767 intron fz2 - chr3L 19209485 intron fz2 - chr3L_11_19205001 chr3L_19205001 RAL-383 1768 chr3L 19319625 19319645 chr3L 19319721 19319741 6 96 1.0 7.0 4.0 1.2 116 chr3L 19319625 intron pip - chr3L 19319683 intron pip - chr3L 19319741 intron pip - chr3L_6_19315001 chr3L_19315001 RAL-383 1769 chr3L 19346872 19346878 chr3L 19346971 19346974 4 98 0.0 7.0 3.5 0.9 102 chr3L 19346872 intron CG32206 - chr3L 19346923 intron CG32206 - chr3L 19346974 intron CG32206 - chr3L_4_19345001 chr3L_19345001 RAL-383 1770 chr3L 19365918 19365928 chr3L 19366035 19366045 4 117 0.0 6.5 3.2 1.0 127 chr3L 19365918 intron CG32206 - chr3L 19365982 intron CG32206 - chr3L 19366045 intron CG32206 - chr3L_4_19365001 chr3L_19365001 RAL-383 1771 chr3L 19382423 19382466 chr3L 19382825 19382868 13 402 3.0 7.0 5.0 2.2 445 chr3L 19382423 intron CG32206 - chr3L 19382646 intron CG32206 - chr3L 19382868 intron CG32206 - chr3L_13_19380001 chr3L_19380001 RAL-383 1772 chr3L 19426738 19426784 chr3L 19426826 19426847 9 89 3.5 5.5 4.5 1.6 109 chr3L 19426738 intergenic not near genes chr3L 19426792 intergenic not near genes chr3L 19426847 intergenic not near genes chr3L_9_19425001 chr3L_19425001 RAL-383 1773 chr3L 19497820 19497863 chr3L 19497930 19497973 13 110 3.0 5.0 4.0 2.6 153 chr3L 19497820 intergenic CG9449 -,CG9451 - chr3L 19497896 intergenic CG9449 -,CG9451 - chr3L 19497973 intergenic CG9451 -,CG9449 - chr3L_13_19495001 chr3L_19495001 RAL-383 1774 chr3L 19527922 19527956 chr3L 19528000 19528054 23 97 8.0 7.0 7.5 2.7 132 chr3L 19527922 intergenic not near genes chr3L 19527988 intergenic not near genes chr3L 19528054 intergenic not near genes chr3L_23_19525001 chr3L_19525001 RAL-383 1775 chr3L 19543526 19543560 chr3L 19543618 19543657 9 95 5.0 6.5 5.8 1.3 131 chr3L 19543526 5` UTR,3` UTR CG9279 -,CG43885 + chr3L 19543592 5` UTR,3` UTR CG9279 -,CG43885 + chr3L 19543657 5` UTR CG9279 - chr3L_9_19540001 chr3L_19540001 RAL-383 1776 chr3L 19579634 19579681 chr3L 19579768 19579815 26 133 2.0 4.5 3.2 6.2 181 chr3L 19579634 intron Shal - chr3L 19579724 intron Shal - chr3L 19579815 intron Shal - chr3L_26_19575001 chr3L_19575001 RAL-383 1777 chr3L 19704381 19704425 chr3L 19704522 19704573 20 146 3.0 7.0 5.0 3.3 192 chr3L 19704381 intron serp - chr3L 19704477 intron serp - chr3L 19704573 intron serp - chr3L_20_19700001 chr3L_19700001 RAL-383 1778 chr3L 19820282 19820309 chr3L 19827850 19827878 412 7 7569 4.5 4.5 4.5 1.3 7596 chr3L 19820282 intron Deaf1 + chr3L 19824080 intron Deaf1 + chr3L 19827878 intron Deaf1 + chr3L_7_19820001 chr3L_19820001 RAL-383 1779 chr3L 19848506 19848533 chr3L 19857692 19857743 roo 4 9204 9.0 6.0 7.5 0.5 9237 chr3L 19848506 intron Papss + chr3L 19853124 intron Papss + chr3L 19857743 intron Papss + chr3L_4_19850001 chr3L_19850001 RAL-383 1780 chr3L 19861821 19861851 chr3L 19863629 19863659 S-element 5 1808 3.5 2.0 2.8 1.3 1838 chr3L 19861821 5` UTR CR45433 + chr3L 19862740 intergenic not near genes chr3L 19863659 intergenic not near genes chr3L_5_19860001 chr3L_19860001 RAL-383 1781 chr3L 19942980 19943019 chr3L 19943097 19943136 12 117 4.5 6.0 5.2 1.9 156 chr3L 19942980 intron Ac76E + chr3L 19943058 intron Ac76E + chr3L 19943136 intron Ac76E + chr3L_12_19940001 chr3L_19940001 RAL-383 1782 chr3L 19981183 19981236 chr3L 19981283 19981336 24 100 2.5 3.5 3.0 6.0 153 chr3L 19981183 intergenic not near genes chr3L 19981260 intergenic CG17732 + chr3L 19981336 intergenic CG17732 + chr3L_24_19980001 chr3L_19980001 RAL-383 1783 chr3L 20029861 20029902 chr3L 20029967 20030008 9 104 5.5 2.5 4.0 1.8 147 chr3L 20029861 intergenic not near genes chr3L 20029934 intergenic not near genes chr3L 20030008 intergenic not near genes chr3L_9_20025001 chr3L_20025001 RAL-383 1784 chr3L 20086771 20086810 chr3L 20086868 20086908 11 98 4.0 0.0 2.0 3.7 137 chr3L 20086771 intron sNPF-R - chr3L 20086840 intron sNPF-R - chr3L 20086908 intron sNPF-R - chr3L_11_20085001 chr3L_20085001 RAL-383 1785 chr3L 20105528 20105569 chr3L 20105630 20105671 22 101 4.0 3.5 3.8 4.6 143 chr3L 20105528 5` UTR CR44679 + chr3L 20105600 intergenic CR44679 +,CG14185 + chr3L 20105671 intergenic CR44679 +,CG14185 + chr3L_22_20105001 chr3L_20105001 RAL-383 1786 chr3L 20113640 20113690 chr3L 20122917 20122949 roo 10 9275 5.0 4.5 4.8 1.7 9309 chr3L 20113640 intergenic not near genes chr3L 20118294 intergenic not near genes chr3L 20122949 intergenic not near genes chr3L_10_20115001 chr3L_20115001 RAL-383 1787 chr3L 20140706 20140751 chr3L 20140929 20140974 12 222 1.5 2.0 1.8 4.3 268 chr3L 20140706 intergenic CG7328 - chr3L 20140840 intergenic CG7328 - chr3L 20140974 intergenic CG7328 - chr3L_12_20140001 chr3L_20140001 RAL-383 1788 chr3L 20145542 20145573 chr3L 20145885 20145921 13 344 9.0 5.0 7.0 1.6 379 chr3L 20145542 intergenic not near genes chr3L 20145732 intergenic not near genes chr3L 20145921 intergenic not near genes chr3L_13_20145001 chr3L_20145001 RAL-383 1789 chr3L 20149122 20149139 chr3L 20149239 20149239 5 126 2.5 3.5 3.0 1.2 117 chr3L 20149122 intergenic CG42674 - chr3L 20149180 intergenic CG42674 - chr3L 20149239 intergenic CG42674 - chr3L_5_20145001 chr3L_20145001 RAL-383 1790 chr3L 20156144 20156193 chr3L 20156286 20156327 14 137 3.5 3.5 3.5 3.1 183 chr3L 20156144 intron CG42674 - chr3L 20156236 intron CG42674 - chr3L 20156327 intron CG42674 - chr3L_14_20155001 chr3L_20155001 RAL-383 1791 chr3L 20182321 20182363 chr3L 20182443 20182485 12 122 6.5 5.0 5.8 1.8 164 chr3L 20182321 intron CG42674 - chr3L 20182403 intron CG42674 - chr3L 20182485 intron CG42674 - chr3L_12_20180001 chr3L_20180001 RAL-383 1792 chr3L 20257317 20257363 chr3L 20258452 20258503 pogo 12 1137 2.5 3.5 3.0 3.0 1186 chr3L 20257317 intron rdgC + chr3L 20257910 intron rdgC + chr3L 20258503 intron rdgC + chr3L_12_20255001 chr3L_20255001 RAL-383 1793 chr3L 20290296 20290342 chr3L 20290401 20290428 17 104 4.0 2.5 3.2 4.0 132 chr3L 20290296 intron gogo - chr3L 20290362 intron gogo - chr3L 20290428 intron gogo - chr3L_17_20290001 chr3L_20290001 RAL-383 1794 chr3L 20321116 20321124 chr3L 20342902 20342910 17.6 4 21788 11.0 16.0 13.5 0.3 21794 chr3L 20321116 exon Spn77Bb + chr3L 20332013 intergenic not near genes chr3L 20342910 exon Spn77Bc + chr3L_4_20330001 chr3L_20330001 RAL-383 1795 chr3L 20422989 20423044 chr3L 20423224 20423279 8 231 3.0 3.0 3.0 2.0 290 chr3L 20422989 exon zye + chr3L 20423134 exon zye + chr3L 20423279 exon zye + chr3L_8_20420001 chr3L_20420001 RAL-383 1796 chr3L 20476737 20476776 chr3L 20484356 20484395 springer 12 7619 5.5 5.5 5.5 1.8 7658 chr3L 20476737 3` UTR isoQC + chr3L 20480566 intergenic not near genes chr3L 20484395 3` UTR ZnT77C - chr3L_12_20480001 chr3L_20480001 RAL-383 1797 chr3L 20525229 20525229 chr3L 24821493 24821494 4 4296264 14.5 15.5 15.0 0.2 4296265 chr3L 20525229 intron CG4825 - chr3L 22673362 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_4_22670001 chr3L_22670001 RAL-383 1798 chr3L 20536291 20536342 chr3L 20536392 20536443 16 100 4.0 1.5 2.8 4.2 152 chr3L 20536291 intron Rcd2 - chr3L 20536367 intron Rcd2 - chr3L 20536443 intron Rcd2 - chr3L_16_20535001 chr3L_20535001 RAL-383 1799 chr3L 20548345 20548365 chr3L 20548454 20548474 5 109 6.5 3.0 4.8 0.9 129 chr3L 20548345 intergenic not near genes chr3L 20548410 intergenic not near genes chr3L 20548474 intergenic not near genes chr3L_5_20545001 chr3L_20545001 RAL-383 1800 chr3L 20548368 20548386 chr3L 20548452 20548495 4 100 4.0 2.5 3.2 1.0 127 chr3L 20548368 intergenic not near genes chr3L 20548432 intergenic not near genes chr3L 20548495 intergenic not near genes chr3L_4_20545001 chr3L_20545001 RAL-383 1801 chr3L 20577781 20577789 chr3L 20578104 20578112 4 322 6.5 6.0 6.2 0.6 331 chr3L 20577781 intergenic not near genes chr3L 20577946 intergenic not near genes chr3L 20578112 intergenic not near genes chr3L_4_20575001 chr3L_20575001 RAL-383 1802 chr3L 20577793 20577807 chr3L 20578102 20578130 5 319 4.5 5.5 5.0 0.8 337 chr3L 20577793 intergenic not near genes chr3L 20577962 intergenic not near genes chr3L 20578130 intergenic not near genes chr3L_5_20575001 chr3L_20575001 RAL-383 1803 chr3L 20577810 20577819 chr3L 20578098 20578138 4 302 3.0 5.0 4.0 0.8 328 chr3L 20577810 intergenic not near genes chr3L 20577974 intergenic not near genes chr3L 20578138 intergenic not near genes chr3L_4_20575001 chr3L_20575001 RAL-383 1804 chr3L 20590063 20590092 chr3L 20590614 20590651 412 6 550 3.0 2.5 2.8 1.6 588 chr3L 20590063 intergenic not near genes chr3L 20590357 intergenic not near genes chr3L 20590651 intergenic not near genes chr3L_6_20590001 chr3L_20590001 RAL-383 1805 chr3L 20657026 20657036 chr3L 20657134 20657144 5 108 7.5 12.0 9.8 0.5 118 chr3L 20657026 intergenic not near genes chr3L 20657085 intergenic not near genes chr3L 20657144 intergenic not near genes chr3L_5_20655001 chr3L_20655001 RAL-383 1806 chr3L 20657037 20657066 chr3L 20657127 20657174 11 104 3.5 10.5 7.0 1.4 137 chr3L 20657037 intergenic not near genes chr3L 20657106 intergenic not near genes chr3L 20657174 intergenic not near genes chr3L_11_20655001 chr3L_20655001 RAL-383 1807 chr3L 20849250 20849301 chr3L 20849349 20849400 16 98 3.0 2.5 2.8 4.2 150 chr3L 20849250 intron CG32432 - chr3L 20849325 intron CG32432 - chr3L 20849400 intron CG32432 - chr3L_16_20845001 chr3L_20845001 RAL-383 1808 chr3L 20858053 20858104 chr3L 20858172 20858223 14 119 3.5 2.5 3.0 3.5 170 chr3L 20858053 intron CG32432 - chr3L 20858138 intron CG32432 - chr3L 20858223 intron CG32432 - chr3L_14_20855001 chr3L_20855001 RAL-383 1809 chr3L 21014896 21014947 chr3L 21023397 21023403 Tirant 6 8494 2.5 2.5 2.5 1.7 8507 chr3L 21014896 intron skd - chr3L 21019150 intron skd - chr3L 21023403 intron skd - chr3L_6_21015001 chr3L_21015001 RAL-383 1810 chr3L 21071297 21071344 chr3L 21071480 21071527 15 183 6.5 2.5 4.5 2.7 230 chr3L 21071297 intron siz + chr3L 21071412 intron siz + chr3L 21071527 intron siz + chr3L_15_21070001 chr3L_21070001 RAL-383 1811 chr3L 21082197 21082240 chr3L 21082289 21082335 9 97 3.0 4.5 3.8 1.9 138 chr3L 21082197 intron ko - chr3L 21082266 intron ko - chr3L 21082335 intron ko - chr3L_9_21080001 chr3L_21080001 RAL-383 1812 chr3L 21151845 21151897 chr3L 21156949 21157000 flea 16 5101 3.0 4.5 3.8 3.3 5155 chr3L 21151845 intron Ac78C - chr3L 21154422 intron Ac78C - chr3L 21157000 intron Ac78C - chr3L_16_21150001 chr3L_21150001 RAL-383 1813 chr3L 21232787 21232833 chr3L 21232934 21232968 15 146 6.5 4.0 5.2 2.4 181 chr3L 21232787 intron Eip78C + chr3L 21232878 intron Eip78C + chr3L 21232968 intron Eip78C + chr3L_15_21230001 chr3L_21230001 RAL-383 1814 chr3L 21301712 21301722 chr3L 21301818 21301827 4 105 14.5 5.0 9.8 0.4 115 chr3L 21301712 5` UTR CR45432 + chr3L 21301770 5` UTR CR45432 + chr3L 21301827 5` UTR,3` UTR CR45432 +,CG11309 - chr3L_4_21300001 chr3L_21300001 RAL-383 1815 chr3L 21301723 21301762 chr3L 21301817 21301868 23 100 6.5 5.0 5.8 3.4 145 chr3L 21301723 5` UTR CR45432 + chr3L 21301796 5` UTR,3` UTR CR45432 +,CG11309 - chr3L 21301868 5` UTR,3` UTR CR45432 +,CG11309 - chr3L_23_21300001 chr3L_21300001 RAL-383 1816 chr3L 21306128 21306168 chr3L 21315307 21315346 roo 17 9179 7.0 2.0 4.5 3.1 9218 chr3L 21306128 3` UTR CG7632 + chr3L 21310737 intron Pc - chr3L 21315346 3` UTR Pc - chr3L_17_21310001 chr3L_21310001 RAL-383 1817 chr3L 21319515 21319552 chr3L 21319624 21319662 12 108 4.0 7.5 5.8 1.8 147 chr3L 21319515 5` UTR Rab26 + chr3L 21319588 5` UTR Rab26 + chr3L 21319662 5` UTR Rab26 + chr3L_12_21315001 chr3L_21315001 RAL-383 1818 chr3L 4341331 4341335 chr3L 21448027 21448027 4 17106694 17.0 17.5 17.2 0.2 17106696 chr3L 4341331 intron Cip4 - chr3L 12894679 3` UTR CG14118 + chr3L 21448027 3` UTR Syx7 + chr3L_4_12890001 chr3L_12890001 RAL-383 1819 chr3L 21498838 21498859 chr3L 21500494 21500513 1360 5 1654 7.5 10.0 8.8 0.5 1675 chr3L 21498838 intron Glg1 - chr3L 21499676 intron Glg1 - chr3L 21500513 intron Glg1 - chr3L_5_21495001 chr3L_21495001 RAL-383 1820 chr3L 21641305 21641357 chr3L 21641409 21641461 16 99 2.0 5.5 3.8 3.3 156 chr3L 21641305 exon Atox1 + chr3L 21641383 intron Atox1 + chr3L 21641461 intron Atox1 + chr3L_16_21640001 chr3L_21640001 RAL-383 1821 chr3L 21764763 21764813 chr3L 21764859 21764909 16 95 4.0 5.0 4.5 2.9 146 chr3L 21764763 intron Syn1 - chr3L 21764836 intron Syn1 - chr3L 21764909 intron Syn1 - chr3L_16_21760001 chr3L_21760001 RAL-383 1822 chr3L 21769033 21769086 chr3L 21769140 21769193 15 106 2.0 4.0 3.0 3.8 160 chr3L 21769033 intron,intron Syn1 -,CG42689 + chr3L 21769113 intron,intron Syn1 -,CG42689 + chr3L 21769193 intron,intron Syn1 -,CG42689 + chr3L_15_21765001 chr3L_21765001 RAL-383 1823 chr3L 21776671 21776690 chr3L 21776778 21776797 7 104 0.0 4.0 2.0 2.3 126 chr3L 21776671 intron,intron CG42689 +,CG42552 + chr3L 21776734 intron,intron CG42689 +,CG42552 + chr3L 21776797 intron,intron CG42689 +,CG42552 + chr3L_7_21775001 chr3L_21775001 RAL-383 1824 chr3L 21852262 21852280 chr3L 21852366 21852375 6 107 1.5 4.5 3.0 1.5 113 chr3L 21852262 intron mub + chr3L 21852318 intron mub + chr3L 21852375 intron mub + chr3L_6_21850001 chr3L_21850001 RAL-383 1825 chr3L 21854080 21854089 chr3L 21854177 21854186 4 97 2.5 2.0 2.2 1.2 106 chr3L 21854080 intron mub + chr3L 21854133 intron mub + chr3L 21854186 intron mub + chr3L_4_21850001 chr3L_21850001 RAL-383 1826 chr3L 21905324 21905352 chr3L 21905424 21905440 5 88 5.5 9.0 7.2 0.6 116 chr3L 21905324 intron mub + chr3L 21905382 intron mub + chr3L 21905440 intron mub + chr3L_5_21905001 chr3L_21905001 RAL-383 1827 chr3L 21972547 21972584 chr3L 21972725 21972762 12 176 7.5 4.0 5.8 1.8 215 chr3L 21972547 intron CG7470 + chr3L 21972654 intron CG7470 + chr3L 21972762 intron CG7470 + chr3L_12_21970001 chr3L_21970001 RAL-383 1828 chr3L 22023204 22023249 chr3L 22023311 22023360 14 107 2.5 4.0 3.2 3.3 156 chr3L 22023204 intergenic not near genes chr3L 22023282 intergenic not near genes chr3L 22023360 intergenic not near genes chr3L_14_22020001 chr3L_22020001 RAL-383 1829 chr3L 22092799 22092827 chr3L 22092919 22092948 6 121 2.5 2.5 2.5 1.7 149 chr3L 22092799 intergenic not near genes chr3L 22092874 intergenic not near genes chr3L 22092948 intergenic not near genes chr3L_6_22090001 chr3L_22090001 RAL-383 1830 chr3L 22099655 22099705 chr3L 22105861 22105911 3S18 18 6205 5.0 6.0 5.5 2.8 6256 chr3L 22099655 intergenic not near genes chr3L 22102783 intergenic not near genes chr3L 22105911 intergenic not near genes chr3L_18_22100001 chr3L_22100001 RAL-383 1831 chr3L 22130479 22130512 chr3L 22130645 22130678 11 166 3.5 4.0 3.8 2.3 199 chr3L 22130479 intergenic not near genes chr3L 22130578 intergenic not near genes chr3L 22130678 intergenic not near genes chr3L_11_22130001 chr3L_22130001 RAL-383 1832 chr3L 22135637 22135674 chr3L 22135920 22135925 6 274 4.5 0.5 2.5 1.7 288 chr3L 22135637 intergenic olf413 + chr3L 22135781 intergenic olf413 + chr3L 22135925 intergenic olf413 + chr3L_6_22135001 chr3L_22135001 RAL-383 1833 chr3L 22188140 22188160 chr3L 22188210 22188261 5 88 1.5 1.5 1.5 2.0 121 chr3L 22188140 intron olf413 + chr3L 22188200 intron olf413 + chr3L 22188261 intron olf413 + chr3L_5_22185001 chr3L_22185001 RAL-383 1834 chr3L 22227637 22227684 chr3L 22227835 22227882 16 193 6.0 6.5 6.2 2.2 245 chr3L 22227637 intron olf413 + chr3L 22227760 intron olf413 + chr3L 22227882 intron olf413 + chr3L_16_22225001 chr3L_22225001 RAL-383 1835 chr3L 22314869 22314895 chr3L 22315099 22315129 5 233 3.5 0.0 1.8 1.8 260 chr3L 22314869 intron Ten-m - chr3L 22314999 intron Ten-m - chr3L 22315129 intron Ten-m - chr3L_5_22310001 chr3L_22310001 RAL-383 1836 chr3L 22447177 22447230 chr3L 22447288 22447341 13 109 5.0 2.5 3.8 2.7 164 chr3L 22447177 intergenic not near genes chr3L 22447259 intergenic not near genes chr3L 22447341 intergenic not near genes chr3L_13_22445001 chr3L_22445001 RAL-383 1837 chr3L 22555756 22555780 chr3L 22563246 22563269 blood 5 7489 7.0 2.5 4.8 0.9 7513 chr3L 22555756 intergenic not near genes chr3L 22559512 intergenic not near genes chr3L 22563269 intergenic not near genes chr3L_5_22555001 chr3L_22555001 RAL-383 1838 chr3L 22555782 22555799 chr3L 22563238 22563281 blood 4 7480 3.5 2.0 2.8 1.1 7499 chr3L 22555782 intergenic not near genes chr3L 22559532 intergenic not near genes chr3L 22563281 intergenic not near genes chr3L_4_22555001 chr3L_22555001 RAL-383 1839 chr3L 22603899 22603947 chr3L 22603997 22604031 16 99 2.5 4.5 3.5 3.6 132 chr3L 22603899 intron CG14459 - chr3L 22603965 intron CG14459 - chr3L 22604031 intron CG14459 - chr3L_16_22600001 chr3L_22600001 RAL-383 1840 chr3L 22617172 22617207 chr3L 22624644 22624679 blood 12 7470 3.0 3.5 3.2 2.9 7507 chr3L 22617172 intron CG14459 - chr3L 22620926 intron CG14459 - chr3L 22624679 intron CG14459 - chr3L_12_22620001 chr3L_22620001 RAL-383 1841 chr3L 22678062 22678102 chr3L 22678175 22678215 6 110 3.0 3.0 3.0 1.5 153 chr3L 22678062 intron CG14457 + chr3L 22678138 intron CG14457 + chr3L 22678215 intron CG14457 + chr3L_6_22675001 chr3L_22675001 RAL-383 1842 chr3L 22755749 22755786 chr3L 22756106 22756143 16 356 4.5 4.0 4.2 3.1 394 chr3L 22755749 intron SPoCk + chr3L 22755946 intron SPoCk + chr3L 22756143 intron SPoCk + chr3L_16_22755001 chr3L_22755001 RAL-383 1843 chr3L 22761367 22761412 chr3L 22766820 22766866 Ivk 20 5453 9.5 5.0 7.2 2.4 5499 chr3L 22761367 intron SPoCk + chr3L 22764116 intron SPoCk + chr3L 22766866 intron SPoCk + chr3L_20_22760001 chr3L_22760001 RAL-383 1844 chr3L 22853452 22853718 chr3L 22853559 22853819 19 105 3.0 5.0 4.0 3.8 367 chr3L 22853452 5` UTR,5` UTR CR43426 +,CG32462 - chr3L 22853636 5` UTR CR43426 + chr3L 22853819 5` UTR CR43426 + chr3L_19_22850001 chr3L_22850001 RAL-383 1845 chr3L 22865974 22866007 chr3L 22867118 22867160 Doc 11 1150 4.0 2.5 3.2 2.6 1186 chr3L 22865974 intron CG33170 + chr3L 22866567 intron CG33170 + chr3L 22867160 intron CG33170 + chr3L_11_22865001 chr3L_22865001 RAL-383 1846 chr3L 9307795 9307796 chr3L 22908066 22908066 7 13600271 13.0 21.5 17.2 0.4 13600271 chr3L 9307795 intergenic not near genes chr3L 16107930 intron Zn72D - chr3L 22908066 intergenic not near genes chr3L_7_16105001 chr3L_16105001 RAL-383 1847 chr3L 20525228 20525229 chr3L 22908066 22908066 8 2382837 14.5 21.5 18.0 0.4 2382838 chr3L 20525228 intron CG4825 - chr3L 21716647 intergenic not near genes chr3L 22908066 intergenic not near genes chr3L_8_21715001 chr3L_21715001 RAL-383 1848 chr3L 22908066 22908066 chr3L 24821493 24821495 17 1913428 22.0 15.5 18.8 0.9 1913429 chr3L 22908066 intergenic not near genes chr3L 23864780 intron CG40470 - chr3L 24821495 intergenic not near genes chr3L_17_23860001 chr3L_23860001 RAL-383 1849 chr3L 19220633 19220637 chr3L 22908067 22908067 4 3687432 19.5 21.5 20.5 0.2 3687434 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_4_21060001 chr3L_21060001 RAL-383 1850 chr3L 22908067 22908067 chr3L 24821493 24821494 12 1913427 22.0 15.5 18.8 0.6 1913427 chr3L 22908067 intergenic not near genes chr3L 23864780 intron CG40470 - chr3L 24821494 intergenic not near genes chr3L_12_23860001 chr3L_23860001 RAL-383 1851 chr3L 22909001 22909050 chr3L 22909112 22909121 10 105 2.5 4.5 3.5 2.2 120 chr3L 22909001 intergenic CR45661 + chr3L 22909061 intergenic CR45661 + chr3L 22909121 intergenic CR45661 + chr3L_10_22905001 chr3L_22905001 RAL-383 1852 chr3L 22949180 22949220 chr3L 22949288 22949328 10 108 5.0 2.5 3.8 2.1 148 chr3L 22949180 intron Mes2 + chr3L 22949254 intron Mes2 + chr3L 22949328 intron Mes2 + chr3L_10_22945001 chr3L_22945001 RAL-383 1853 chr3L 22989842 22989891 chr3L 22996836 22996875 297 18 6992 2.5 5.0 3.8 3.8 7033 chr3L 22989842 intergenic not near genes chr3L 22993358 intergenic not near genes chr3L 22996875 intergenic not near genes chr3L_18_22990001 chr3L_22990001 RAL-383 1854 chr3L 23402299 23402348 chr3L 23402431 23402480 15 127 1.0 1.5 1.2 6.8 181 chr3L 23402299 intergenic not near genes chr3L 23402390 intergenic not near genes chr3L 23402480 intergenic not near genes chr3L_15_23400001 chr3L_23400001 RAL-383 1855 chr3L 23468013 23468025 chr3L 23468166 23468172 4 149 42.0 35.0 38.5 0.1 159 chr3L 23468013 intergenic not near genes chr3L 23468092 intergenic not near genes chr3L 23468172 intergenic not near genes chr3L_4_23465001 chr3L_23465001 RAL-383 1856 chr3L 23786125 23786136 chr3L 23787642 23787684 7 1523 18.0 55.5 36.8 0.2 1559 chr3L 23786125 exon CG43968 + chr3L 23786904 exon CG43968 + chr3L 23787684 intergenic CG43968 + chr3L_7_23785001 chr3L_23785001 RAL-383 1857 chr3L 23815312 23815331 chr3L 23815420 23815429 4 106 4.5 9.0 6.8 0.5 117 chr3L 23815312 intergenic not near genes chr3L 23815370 intergenic not near genes chr3L 23815429 intergenic not near genes chr3L_4_23815001 chr3L_23815001 RAL-383 1858 chr3L 23868801 23868821 chr3L 23869132 23869152 4 331 25.5 23.0 24.2 0.2 351 chr3L 23868801 intron CG40470 - chr3L 23868976 intron CG40470 - chr3L 23869152 intron CG40470 - chr3L_4_23865001 chr3L_23865001 RAL-383 1859 chr3L 24012411 24012432 chr3L 24020748 24020793 roo 7 8353 2.0 3.0 2.5 2.0 8382 chr3L 24012411 intergenic not near genes chr3L 24016602 intergenic not near genes chr3L 24020793 intergenic not near genes chr3L_7_24015001 chr3L_24015001 RAL-383 1860 chr3L 24168787 24168821 chr3L 24176116 24176157 ZAM 6 7332 2.0 2.0 2.0 2.0 7370 chr3L 24168787 intron Snap25 + chr3L 24172472 intron Snap25 + chr3L 24176157 intron Snap25 + chr3L_6_24170001 chr3L_24170001 RAL-383 1861 chr3L 24791875 24791914 chr3L 24796674 24796712 Doc 8 4799 3.5 5.0 4.2 1.5 4837 chr3L 24791875 intergenic not near genes chr3L 24794294 intergenic not near genes chr3L 24796712 intergenic not near genes chr3L_8_24790001 chr3L_24790001 RAL-383 1862 chr3L 18198930 18198930 chr3L 24821492 24821492 9 6622562 0.5 15.5 8.0 1.0 6622562 chr3L 18198930 intergenic not near genes chr3L 21510211 intron M6 + chr3L 24821492 intergenic not near genes chr3L_9_21510001 chr3L_21510001 RAL-383 1863 chr3L 25502194 25502218 chr3L 25502317 25502341 4 123 10.5 12.5 11.5 0.3 147 chr3L 25502194 intron CG41343 - chr3L 25502268 intron CG41343 - chr3L 25502341 intron CG41343 - chr3L_4_25500001 chr3L_25500001 RAL-383 1864 chr3L 23289001 23289043 chr3L 25843662 25843704 10 2554665 24.0 24.0 24.0 0.4 2554703 chr3L 23289001 intergenic not near genes chr3L 24566352 intergenic not near genes chr3L 25843704 intron CG40178 - chr3L_10_24565001 chr3L_24565001 RAL-383 1865 chr3L 26008743 26008792 chr3L 26008910 26008959 10 166 2.0 1.0 1.5 4.0 216 chr3L 26008743 intron CG40178 - chr3L 26008851 intron CG40178 - chr3L 26008959 intron CG40178 - chr3L_10_26005001 chr3L_26005001 RAL-383 1866 chr3L 26717664 26717693 chr3L 26717744 26717789 10 92 2.5 0.5 1.5 4.0 125 chr3L 26717664 intergenic not near genes chr3L 26717726 intergenic not near genes chr3L 26717789 intergenic not near genes chr3L_10_26715001 chr3L_26715001 RAL-383 1867 chr3L 27390437 27390696 chr3L 27390677 27390789 5 124 28.0 31.0 29.5 0.2 352 chr3L 27390437 intron Dbp80 + chr3L 27390613 intron Dbp80 + chr3L 27390789 intron Dbp80 + chr3L_5_27390001 chr3L_27390001 RAL-383 1868 chr3R 97110 97113 chr3R 99846 99849 5 2736 25.0 4.5 14.8 0.3 2739 chr3R 97110 intergenic not near genes chr3R 98480 intergenic not near genes chr3R 99849 intergenic not near genes chr3R_5_95001 chr3R_95001 RAL-383 1869 chr3R 1830801 1830840 chr3R 1830901 1830940 7 97 2.5 3.0 2.8 1.8 139 chr3R 1830801 intergenic not near genes chr3R 1830870 intergenic not near genes chr3R 1830940 intergenic not near genes chr3R_7_1830001 chr3R_1830001 RAL-383 1870 chr3R 2534115 2534167 chr3R 2541704 2541731 10 7583 12.5 13.0 12.8 0.7 7616 chr3R 2534115 intergenic not near genes chr3R 2537923 intergenic not near genes chr3R 2541731 intergenic not near genes chr3R_10_2535001 chr3R_2535001 RAL-383 1871 chr3R 2556890 2556929 chr3R 2557603 2557643 6 713 20.0 11.0 15.5 0.4 753 chr3R 2556890 intron CG41056 - chr3R 2557266 intron CG41056 - chr3R 2557643 intron CG41056 - chr3R_6_2555001 chr3R_2555001 RAL-383 1872 chr3R 4105025 4105064 chr3R 4110248 4110264 copia 5 5219 3.0 3.5 3.2 1.2 5239 chr3R 4105025 intergenic not near genes chr3R 4107644 intergenic not near genes chr3R 4110264 intergenic not near genes chr3R_5_4105001 chr3R_4105001 RAL-383 1873 chr3R 4132882 4132930 chr3R 4133056 4133104 11 173 4.0 4.5 4.2 2.1 222 chr3R 4132882 5` UTR Gfat1 + chr3R 4132993 intron Gfat1 + chr3R 4133104 intron Gfat1 + chr3R_11_4130001 chr3R_4130001 RAL-383 1874 chr3R 4206049 4206101 chr3R 4211644 4211682 mdg3 13 5594 4.0 3.5 3.8 2.7 5633 chr3R 4206049 intron CG14636 - chr3R 4208866 intron CG14636 - chr3R 4211682 intron CG14636 - chr3R_13_4205001 chr3R_4205001 RAL-383 1875 chr3R 4314323 4314345 chr3R 4314537 4314559 7 214 5.0 8.0 6.5 0.9 236 chr3R 4314323 3` UTR CG9791 + chr3R 4314441 intergenic Syt14 -,CG9791 + chr3R 4314559 3` UTR Syt14 - chr3R_7_4310001 chr3R_4310001 RAL-383 1876 chr3R 4366742 4366765 chr3R 4375145 4375167 roo 4 8402 3.5 6.0 4.8 0.7 8425 chr3R 4366742 3` UTR CG1090 + chr3R 4370954 intergenic not near genes chr3R 4375167 5` UTR CR44922 + chr3R_4_4370001 chr3R_4370001 RAL-383 1877 chr3R 4366766 4366787 chr3R 4375140 4375189 roo 8 8399 3.0 5.5 4.2 1.5 8423 chr3R 4366766 3` UTR CG1090 + chr3R 4370978 intergenic not near genes chr3R 4375189 5` UTR CR44922 + chr3R_8_4370001 chr3R_4370001 RAL-383 1878 chr3R 4408421 4408441 chr3R 4412714 4412765 Juan 6 4317 11.5 6.5 9.0 0.6 4344 chr3R 4408421 intron CG32944 - chr3R 4410593 intron CG32944 - chr3R 4412765 intron CG32944 - chr3R_6_4410001 chr3R_4410001 RAL-383 1879 chr3R 4584608 4584649 chr3R 4584721 4584762 6 112 1.5 5.0 3.2 1.4 154 chr3R 4584608 intergenic not near genes chr3R 4584685 intergenic CR45558 - chr3R 4584762 intergenic CR45558 - chr3R_6_4580001 chr3R_4580001 RAL-383 1880 chr3R 4599283 4599332 chr3R 4599387 4599436 8 99 1.0 4.0 2.5 2.3 153 chr3R 4599283 intron CR44317 - chr3R 4599360 intron CR44317 - chr3R 4599436 intron CR44317 - chr3R_8_4595001 chr3R_4595001 RAL-383 1881 chr3R 4634319 4634368 chr3R 4634426 4634474 19 106 4.0 4.5 4.2 3.7 155 chr3R 4634319 intergenic not near genes chr3R 4634396 intergenic not near genes chr3R 4634474 intergenic CR45673 + chr3R_19_4630001 chr3R_4630001 RAL-383 1882 chr3R 4657272 4657310 chr3R 4657381 4657419 13 109 4.5 5.0 4.8 2.2 147 chr3R 4657272 intron spartin + chr3R 4657346 intron spartin + chr3R 4657419 intron spartin + chr3R_13_4655001 chr3R_4655001 RAL-383 1883 chr3R 4666386 4666415 chr3R 4666907 4666936 4 521 4.5 6.0 5.2 0.6 550 chr3R 4666386 intron CG43427 + chr3R 4666661 intron CG43427 + chr3R 4666936 intron CG43427 + chr3R_4_4665001 chr3R_4665001 RAL-383 1884 chr3R 4683162 4683204 chr3R 4684941 4684983 S-element 8 1776 5.5 2.0 3.8 1.7 1821 chr3R 4683162 intron CG43427 + chr3R 4684072 intron CG43427 + chr3R 4684983 intron CG43427 + chr3R_8_4680001 chr3R_4680001 RAL-383 1885 chr3R 4736851 4736880 chr3R 4736969 4736998 12 119 32.5 31.0 31.8 0.4 147 chr3R 4736851 intron tacc - chr3R 4736924 intron tacc - chr3R 4736998 intron tacc - chr3R_12_4735001 chr3R_4735001 RAL-383 1886 chr3R 4753224 4753266 chr3R 4757547 4757589 F-element 18 4320 4.0 3.0 3.5 4.0 4365 chr3R 4753224 intron,intron atms +,CG44098 - chr3R 4755406 intron,intron atms +,CG44098 - chr3R 4757589 intron,exon atms +,CG44098 - chr3R_18_4755001 chr3R_4755001 RAL-383 1887 chr3R 4769143 4769186 chr3R 4769236 4769284 9 97 3.5 5.5 4.5 1.6 141 chr3R 4769143 intron,intron atms +,CG44098 - chr3R 4769214 intron,intron atms +,CG44098 - chr3R 4769284 intron,intron atms +,CG44098 - chr3R_9_4765001 chr3R_4765001 RAL-383 1888 chr3R 4952926 4952977 chr3R 4953024 4953075 14 98 3.5 6.0 4.8 2.4 149 chr3R 4952926 intergenic UbcD6 - chr3R 4953000 intergenic UbcD6 - chr3R 4953075 intergenic UbcD6 -,CG14661 - chr3R_14_4950001 chr3R_4950001 RAL-383 1889 chr3R 4965986 4966032 chr3R 4966098 4966144 5 110 4.5 2.5 3.5 1.1 158 chr3R 4965986 intron CG1124 + chr3R 4966065 intron CG1124 + chr3R 4966144 intron CG1124 + chr3R_5_4965001 chr3R_4965001 RAL-383 1890 chr3R 4970674 4970725 chr3R 4970861 4970912 6 185 1.0 1.0 1.0 3.0 238 chr3R 4970674 intergenic not near genes chr3R 4970793 intergenic not near genes chr3R 4970912 intergenic not near genes chr3R_6_4970001 chr3R_4970001 RAL-383 1891 chr3R 5045831 5045877 chr3R 5052953 5052999 HMS-Beagle 11 7122 3.0 5.5 4.2 2.1 7168 chr3R 5045831 intron CR43635 - chr3R 5049415 intergenic not near genes chr3R 5052999 intergenic CR45588 - chr3R_11_5045001 chr3R_5045001 RAL-383 1892 chr3R 5067965 5067973 chr3R 5073502 5073510 mdg3 4 5537 9.0 8.5 8.8 0.4 5545 chr3R 5067965 intergenic not near genes chr3R 5070738 intergenic not near genes chr3R 5073510 intergenic not near genes chr3R_4_5070001 chr3R_5070001 RAL-383 1893 chr3R 5067988 5068011 chr3R 5073499 5073548 mdg3 8 5532 5.5 8.5 7.0 1.0 5560 chr3R 5067988 intergenic not near genes chr3R 5070768 intergenic not near genes chr3R 5073548 intergenic not near genes chr3R_8_5070001 chr3R_5070001 RAL-383 1894 chr3R 5133147 5133166 chr3R 5133269 5133302 6 125 3.0 3.0 3.0 1.5 155 chr3R 5133147 intergenic not near genes chr3R 5133224 intergenic not near genes chr3R 5133302 intergenic not near genes chr3R_6_5130001 chr3R_5130001 RAL-383 1895 chr3R 5193897 5193920 chr3R 5194020 5194057 5 129 5.0 4.5 4.8 0.9 160 chr3R 5193897 intron cno - chr3R 5193977 intron cno - chr3R 5194057 intron cno - chr3R_5_5190001 chr3R_5190001 RAL-383 1896 chr3R 5278072 5278103 chr3R 5278173 5278204 9 100 8.5 4.0 6.2 1.2 132 chr3R 5278072 intron mtd - chr3R 5278138 intron mtd - chr3R 5278204 intron mtd - chr3R_9_5275001 chr3R_5275001 RAL-383 1897 chr3R 5278104 5278121 chr3R 5278171 5278222 9 90 5.0 4.0 4.5 1.6 118 chr3R 5278104 intron mtd - chr3R 5278163 intron mtd - chr3R 5278222 intron mtd - chr3R_9_5275001 chr3R_5275001 RAL-383 1898 chr3R 5306108 5306162 chr3R 5306215 5306249 10 103 1.5 6.5 4.0 2.0 141 chr3R 5306108 intron mtd - chr3R 5306178 intron mtd - chr3R 5306249 intron mtd - chr3R_10_5305001 chr3R_5305001 RAL-383 1899 chr3R 5338390 5338429 chr3R 5343582 5343621 Rt1c 11 5196 6.0 8.0 7.0 1.4 5231 chr3R 5338390 intron mtd - chr3R 5341006 intron mtd - chr3R 5343621 intron mtd - chr3R_11_5340001 chr3R_5340001 RAL-383 1900 chr3R 5385966 5385999 chr3R 5386151 5386190 9 188 3.5 3.5 3.5 2.0 224 chr3R 5385966 intron kkv - chr3R 5386078 intron kkv - chr3R 5386190 intron kkv - chr3R_9_5385001 chr3R_5385001 RAL-383 1901 chr3R 5445949 5445994 chr3R 5452429 5452463 Burdock 19 6479 2.5 4.0 3.2 4.5 6514 chr3R 5445949 intron CG14669 + chr3R 5449206 intron CG14669 + chr3R 5452463 intron CG14669 + chr3R_19_5445001 chr3R_5445001 RAL-383 1902 chr3R 5453300 5453343 chr3R 5453433 5453459 8 119 1.5 0.5 1.0 4.0 159 chr3R 5453300 intron CG14669 + chr3R 5453380 intron CG14669 + chr3R 5453459 intron CG14669 + chr3R_8_5450001 chr3R_5450001 RAL-383 1903 chr3R 5626989 5627043 chr3R 5627125 5627158 12 133 2.0 1.5 1.8 4.3 169 chr3R 5626989 intergenic not near genes chr3R 5627074 intergenic not near genes chr3R 5627158 intergenic not near genes chr3R_12_5625001 chr3R_5625001 RAL-383 1904 chr3R 5698089 5698133 chr3R 5698204 5698244 19 111 5.0 8.5 6.8 2.4 155 chr3R 5698089 intron plx + chr3R 5698166 intron plx + chr3R 5698244 intron plx + chr3R_19_5695001 chr3R_5695001 RAL-383 1905 chr3R 5745997 5746045 chr3R 5746258 5746306 pogo 11 261 2.5 4.0 3.2 2.6 309 chr3R 5745997 3` UTR Madm + chr3R 5746152 3` UTR Madm + chr3R 5746306 3` UTR Madm + chr3R_11_5745001 chr3R_5745001 RAL-383 1906 chr3R 5747001 5747037 chr3R 5753212 5753242 diver 8 6209 5.0 3.5 4.2 1.5 6241 chr3R 5747001 intergenic Madm + chr3R 5750122 intergenic not near genes chr3R 5753242 intergenic CG2091 - chr3R_8_5750001 chr3R_5750001 RAL-383 1907 chr3R 5822366 5822385 chr3R 5823552 5823572 1360 4 1186 7.0 6.0 6.5 0.5 1206 chr3R 5822366 3` UTR CG2023 - chr3R 5822969 3` UTR CG2023 - chr3R 5823572 3` UTR CG2023 - chr3R_4_5820001 chr3R_5820001 RAL-383 1908 chr3R 5861562 5861590 chr3R 5861661 5861688 8 99 2.5 3.0 2.8 2.1 126 chr3R 5861562 intron CG2017 - chr3R 5861625 intron CG2017 - chr3R 5861688 intron CG2017 - chr3R_8_5860001 chr3R_5860001 RAL-383 1909 chr3R 5927562 5927584 chr3R 5927806 5927839 pogo 9 251 3.0 6.0 4.5 1.6 277 chr3R 5927562 intron CG34113 - chr3R 5927700 intron CG34113 - chr3R 5927839 intron CG34113 - chr3R_9_5925001 chr3R_5925001 RAL-383 1910 chr3R 5935349 5935394 chr3R 5935445 5935474 16 94 4.0 0.5 2.2 5.0 125 chr3R 5935349 intron CG34113 - chr3R 5935412 intron CG34113 - chr3R 5935474 intron CG34113 - chr3R_16_5935001 chr3R_5935001 RAL-383 1911 chr3R 5943388 5943414 chr3R 5943485 5943492 7 94 0.5 5.5 3.0 1.8 104 chr3R 5943388 intron CG34113 - chr3R 5943440 intron CG34113 - chr3R 5943492 intron CG34113 - chr3R_7_5940001 chr3R_5940001 RAL-383 1912 chr3R 6015949 6015982 chr3R 6024445 6024481 Tirant 7 8498 1.0 1.5 1.2 3.2 8532 chr3R 6015949 intergenic not near genes chr3R 6020215 intergenic not near genes chr3R 6024481 intergenic not near genes chr3R_7_6020001 chr3R_6020001 RAL-383 1913 chr3R 6121005 6121057 chr3R 6121101 6121153 14 94 2.0 0.0 1.0 7.0 148 chr3R 6121005 intergenic not near genes chr3R 6121079 intergenic not near genes chr3R 6121153 intergenic not near genes chr3R_14_6120001 chr3R_6120001 RAL-383 1914 chr3R 6121167 6121179 chr3R 6121403 6121405 BS 7 236 0.0 11.0 5.5 1.1 238 chr3R 6121167 intergenic not near genes chr3R 6121286 intergenic not near genes chr3R 6121405 intergenic not near genes chr3R_7_6120001 chr3R_6120001 RAL-383 1915 chr3R 6175157 6175204 chr3R 6182449 6182496 HMS-Beagle2 20 7291 3.5 3.5 3.5 4.4 7339 chr3R 6175157 intergenic Osi1 + chr3R 6178826 intron CR45194 + chr3R 6182496 intergenic CR45194 + chr3R_20_6175001 chr3R_6175001 RAL-383 1916 chr3R 6428802 6428839 chr3R 6428916 6428960 13 119 3.0 5.0 4.0 2.6 158 chr3R 6428802 intron gpp + chr3R 6428881 intron gpp + chr3R 6428960 intron gpp + chr3R_13_6425001 chr3R_6425001 RAL-383 1917 chr3R 6461558 6461609 chr3R 6461659 6461709 13 100 4.0 1.5 2.8 3.4 151 chr3R 6461558 intergenic not near genes chr3R 6461634 intergenic not near genes chr3R 6461709 intergenic not near genes chr3R_13_6460001 chr3R_6460001 RAL-383 1918 chr3R 6510021 6510044 chr3R 6515103 6515145 jockey 8 5096 3.5 2.0 2.8 2.1 5124 chr3R 6510021 intergenic not near genes chr3R 6512583 intergenic not near genes chr3R 6515145 intergenic not near genes chr3R_8_6510001 chr3R_6510001 RAL-383 1919 chr3R 6526332 6526376 chr3R 6526544 6526573 11 208 3.0 2.5 2.8 2.9 241 chr3R 6526332 intergenic not near genes chr3R 6526452 intergenic not near genes chr3R 6526573 intergenic not near genes chr3R_11_6525001 chr3R_6525001 RAL-383 1920 chr3R 6529919 6529941 chr3R 6530135 6530172 4 225 0.5 3.5 2.0 1.3 253 chr3R 6529919 3` UTR dpr11 - chr3R 6530046 3` UTR dpr11 - chr3R 6530172 3` UTR dpr11 - chr3R_4_6530001 chr3R_6530001 RAL-383 1921 chr3R 6560767 6560780 chr3R 6560897 6560925 4 143 5.0 3.0 4.0 0.8 158 chr3R 6560767 intron dpr11 - chr3R 6560846 intron dpr11 - chr3R 6560925 intron dpr11 - chr3R_4_6560001 chr3R_6560001 RAL-383 1922 chr3R 6640595 6640647 chr3R 6640691 6640732 12 95 2.5 1.0 1.8 4.3 137 chr3R 6640595 intergenic not near genes chr3R 6640664 intergenic not near genes chr3R 6640732 intergenic CG31286 + chr3R_12_6640001 chr3R_6640001 RAL-383 1923 chr3R 6697292 6697313 chr3R 6697398 6697419 7 105 9.0 4.5 6.8 0.9 127 chr3R 6697292 intergenic not near genes chr3R 6697356 intergenic not near genes chr3R 6697419 intergenic not near genes chr3R_7_6695001 chr3R_6695001 RAL-383 1924 chr3R 6705667 6705710 chr3R 6705911 6705954 7 243 0.0 1.5 0.8 3.9 287 chr3R 6705667 intergenic not near genes chr3R 6705810 intergenic not near genes chr3R 6705954 intergenic not near genes chr3R_7_6705001 chr3R_6705001 RAL-383 1925 chr3R 6737483 6737520 chr3R 6739290 6739310 Doc 6 1799 3.0 1.5 2.2 1.9 1827 chr3R 6737483 intron pb - chr3R 6738396 intron pb - chr3R 6739310 intron pb - chr3R_6_6735001 chr3R_6735001 RAL-383 1926 chr3R 6828005 6828033 chr3R 6828101 6828129 7 96 3.5 3.0 3.2 1.7 124 chr3R 6828005 intron Scr - chr3R 6828067 intron Scr - chr3R 6828129 intron Scr - chr3R_7_6825001 chr3R_6825001 RAL-383 1927 chr3R 6842755 6842802 chr3R 6842858 6842905 7 100 5.5 0.0 2.8 1.8 150 chr3R 6842755 intron Scr - chr3R 6842830 intron Scr - chr3R 6842905 intron Scr - chr3R_7_6840001 chr3R_6840001 RAL-383 1928 chr3R 6856366 6856400 chr3R 6856503 6856537 9 136 2.0 4.0 3.0 2.2 171 chr3R 6856366 intergenic not near genes chr3R 6856452 intergenic not near genes chr3R 6856537 intergenic not near genes chr3R_9_6855001 chr3R_6855001 RAL-383 1929 chr3R 6978880 6978910 chr3R 6978969 6979015 12 104 4.5 1.0 2.8 3.2 135 chr3R 6978880 intron Antp - chr3R 6978948 intron Antp - chr3R 6979015 intron Antp - chr3R_12_6975001 chr3R_6975001 RAL-383 1930 chr3R 7094694 7094694 chr3R 7773344 7773344 4 678650 18.5 9.5 14.0 0.3 678650 chr3R 7094694 3` UTR e(y)2b + chr3R 7434019 intergenic not near genes chr3R 7773344 intergenic not near genes chr3R_4_7430001 chr3R_7430001 RAL-383 1931 chr3R 7103285 7103313 chr3R 7103365 7103409 8 88 2.5 6.0 4.2 1.5 124 chr3R 7103285 intron Alh - chr3R 7103347 intron Alh - chr3R 7103409 intron Alh - chr3R_8_7100001 chr3R_7100001 RAL-383 1932 chr3R 7106509 7106536 chr3R 7106610 7106637 9 101 3.5 4.0 3.8 1.9 128 chr3R 7106509 intron Alh - chr3R 7106573 intron Alh - chr3R 7106637 intron Alh - chr3R_9_7105001 chr3R_7105001 RAL-383 1933 chr3R 7126487 7126532 chr3R 7126602 7126647 18 114 2.5 7.0 4.8 3.1 160 chr3R 7126487 3` UTR,3` UTR CG10098 +,CG10068 - chr3R 7126567 3` UTR CG10068 - chr3R 7126647 3` UTR CG10068 - chr3R_18_7125001 chr3R_7125001 RAL-383 1934 chr3R 7173668 7173704 chr3R 7173768 7173804 7 100 5.5 8.5 7.0 0.9 136 chr3R 7173668 intron sas + chr3R 7173736 intron sas + chr3R 7173804 intron sas + chr3R_7_7170001 chr3R_7170001 RAL-383 1935 chr3R 7210574 7210618 chr3R 7210671 7210724 7 103 0.0 4.0 2.0 2.3 150 chr3R 7210574 intergenic not near genes chr3R 7210649 intergenic not near genes chr3R 7210724 intergenic not near genes chr3R_7_7210001 chr3R_7210001 RAL-383 1936 chr3R 7243967 7244013 chr3R 7244069 7244117 24 103 6.5 4.0 5.2 3.9 150 chr3R 7243967 3` UTR CG14607 + chr3R 7244042 intergenic CG14607 +,CG1234 - chr3R 7244117 intergenic CG14607 +,CG1234 - chr3R_24_7240001 chr3R_7240001 RAL-383 1937 chr3R 7270920 7270969 chr3R 7271024 7271073 15 103 5.5 4.0 4.8 2.6 153 chr3R 7270920 intergenic Syt4 + chr3R 7270996 intergenic Syt4 + chr3R 7271073 intergenic Syt4 + chr3R_15_7270001 chr3R_7270001 RAL-383 1938 chr3R 7382418 7382458 chr3R 7382522 7382562 5 102 3.5 2.5 3.0 1.2 144 chr3R 7382418 intergenic not near genes chr3R 7382490 intergenic not near genes chr3R 7382562 intergenic not near genes chr3R_5_7380001 chr3R_7380001 RAL-383 1939 chr3R 7404942 7404949 chr3R 7405038 7405044 4 96 0.0 2.5 1.2 1.8 102 chr3R 7404942 intergenic not near genes chr3R 7404993 intergenic not near genes chr3R 7405044 intergenic not near genes chr3R_4_7400001 chr3R_7400001 RAL-383 1940 chr3R 7447971 7448008 chr3R 7448069 7448106 12 98 5.5 6.0 5.8 1.8 135 chr3R 7447971 intergenic not near genes chr3R 7448038 intergenic not near genes chr3R 7448106 intergenic not near genes chr3R_12_7445001 chr3R_7445001 RAL-383 1941 chr3R 7542459 7542467 chr3R 7542556 7542564 6 97 2.5 2.5 2.5 1.7 105 chr3R 7542459 intron alpha-Est2 + chr3R 7542512 intron alpha-Est2 + chr3R 7542564 intron alpha-Est2 + chr3R_6_7540001 chr3R_7540001 RAL-383 1942 chr3R 7548581 7548630 chr3R 7548680 7548729 17 98 7.5 6.0 6.8 2.2 148 chr3R 7548581 intron alpha-Est1 - chr3R 7548655 intron alpha-Est1 - chr3R 7548729 intron alpha-Est1 - chr3R_17_7545001 chr3R_7545001 RAL-383 1943 chr3R 7621526 7621564 chr3R 7621637 7621668 6 107 3.5 4.0 3.8 1.2 142 chr3R 7621526 intron CG34127 - chr3R 7621597 intron CG34127 - chr3R 7621668 intron CG34127 - chr3R_6_7620001 chr3R_7620001 RAL-383 1944 chr3R 7631241 7631266 chr3R 7631348 7631352 5 103 4.5 6.5 5.5 0.8 111 chr3R 7631241 intron CG34127 - chr3R 7631296 intron CG34127 - chr3R 7631352 intron CG34127 - chr3R_5_7630001 chr3R_7630001 RAL-383 1945 chr3R 7635636 7635669 chr3R 7635739 7635772 10 103 6.0 3.5 4.8 1.7 136 chr3R 7635636 intron CG34127 - chr3R 7635704 intron CG34127 - chr3R 7635772 intron CG34127 - chr3R_10_7635001 chr3R_7635001 RAL-383 1946 chr3R 7677893 7677935 chr3R 7678026 7678068 14 128 5.0 1.0 3.0 3.5 175 chr3R 7677893 intron Nlg1 + chr3R 7677980 intron Nlg1 + chr3R 7678068 intron Nlg1 + chr3R_14_7675001 chr3R_7675001 RAL-383 1947 chr3R 7694561 7694607 chr3R 7713642 7713688 invader3 12 19080 3.5 5.0 4.2 2.3 19127 chr3R 7694561 3` UTR Nlg1 + chr3R 7704124 intergenic not near genes chr3R 7713688 intergenic not near genes chr3R_12_7700001 chr3R_7700001 RAL-383 1948 chr3R 7724433 7724475 chr3R 7724533 7724553 7 93 3.0 5.0 4.0 1.4 120 chr3R 7724433 3` UTR CG2616 + chr3R 7724493 3` UTR CG2616 + chr3R 7724553 3` UTR CG2616 + chr3R_7_7720001 chr3R_7720001 RAL-383 1949 chr3R 7729448 7729463 chr3R 7737406 7737421 Stalker2 6 7958 9.0 7.5 8.2 0.7 7973 chr3R 7729448 intergenic not near genes chr3R 7733434 intergenic not near genes chr3R 7737421 intergenic not near genes chr3R_6_7730001 chr3R_7730001 RAL-383 1950 chr3R 7729466 7729493 chr3R 7737404 7737451 Stalker2 10 7955 7.0 7.0 7.0 1.2 7985 chr3R 7729466 intergenic not near genes chr3R 7733458 intergenic not near genes chr3R 7737451 intergenic not near genes chr3R_10_7730001 chr3R_7730001 RAL-383 1951 chr3R 7738567 7738611 chr3R 7738733 7738777 8 164 3.5 3.5 3.5 1.8 210 chr3R 7738567 intergenic CG43254 - chr3R 7738672 intergenic CG43254 - chr3R 7738777 intergenic CG43254 - chr3R_8_7735001 chr3R_7735001 RAL-383 1952 chr3R 7760237 7760284 chr3R 7760766 7760811 23 526 5.5 3.5 4.5 4.2 574 chr3R 7760237 intron Sp7 + chr3R 7760524 intron Sp7 + chr3R 7760811 5` UTR Sp7 + chr3R_23_7760001 chr3R_7760001 RAL-383 1953 chr3R 7775896 7775939 chr3R 7775997 7776038 6 100 4.5 2.0 3.2 1.4 142 chr3R 7775896 intergenic not near genes chr3R 7775967 intergenic not near genes chr3R 7776038 intergenic not near genes chr3R_6_7775001 chr3R_7775001 RAL-383 1954 chr3R 7849623 7849670 chr3R 7850809 7850857 1360 9 1185 5.0 5.0 5.0 1.5 1234 chr3R 7849623 intron CG34384 + chr3R 7850240 intron CG34384 + chr3R 7850857 intron CG34384 + chr3R_9_7850001 chr3R_7850001 RAL-383 1955 chr3R 7773344 7773344 chr3R 7890532 7890535 4 117190 10.5 12.0 11.2 0.3 117191 chr3R 7773344 intergenic not near genes chr3R 7831940 intron CG34384 + chr3R 7890535 intron mRpS9 - chr3R_4_7830001 chr3R_7830001 RAL-383 1956 chr3R 7948435 7948466 chr3R 7948522 7948563 9 92 3.0 3.5 3.2 2.1 128 chr3R 7948435 intron dsx - chr3R 7948499 intron dsx - chr3R 7948563 intron dsx - chr3R_9_7945001 chr3R_7945001 RAL-383 1957 chr3R 7955916 7955933 chr3R 7956011 7956030 6 96 5.0 2.0 3.5 1.3 114 chr3R 7955916 intron dsx - chr3R 7955973 intron dsx - chr3R 7956030 intron dsx - chr3R_6_7955001 chr3R_7955001 RAL-383 1958 chr3R 7965302 7965338 chr3R 7965410 7965446 12 108 4.5 7.0 5.8 1.8 144 chr3R 7965302 intron dsx - chr3R 7965374 intron dsx - chr3R 7965446 intron dsx - chr3R_12_7965001 chr3R_7965001 RAL-383 1959 chr3R 7973324 7973342 chr3R 7974408 7974426 1360 10 1084 2.5 6.5 4.5 1.8 1102 chr3R 7973324 intergenic not near genes chr3R 7973875 intergenic not near genes chr3R 7974426 3` UTR CD98hc - chr3R_10_7970001 chr3R_7970001 RAL-383 1960 chr3R 7993174 7993222 chr3R 7993292 7993340 15 117 2.5 5.5 4.0 3.0 166 chr3R 7993174 intron CG2781 - chr3R 7993257 intron CG2781 - chr3R 7993340 intron CG2781 - chr3R_15_7990001 chr3R_7990001 RAL-383 1961 chr3R 8090251 8090301 chr3R 8090448 8090498 20 196 3.5 3.5 3.5 4.4 247 chr3R 8090251 5` UTR CR44330 + chr3R 8090374 intergenic CR44330 + chr3R 8090498 intergenic CR44330 + chr3R_20_8090001 chr3R_8090001 RAL-383 1962 chr3R 8090553 8090571 chr3R 8094045 8094062 297 8 3494 4.5 4.5 4.5 1.5 3509 chr3R 8090553 intergenic CR44330 + chr3R 8092308 intergenic not near genes chr3R 8094062 intergenic CG7900 + chr3R_8_8090001 chr3R_8090001 RAL-383 1963 chr3R 8094391 8094433 chr3R 8099716 8099758 Transpac 13 5324 7.5 4.0 5.8 1.9 5367 chr3R 8094391 intron CG7900 + chr3R 8097074 intron CG7900 + chr3R 8099758 intron CG7900 + chr3R_13_8095001 chr3R_8095001 RAL-383 1964 chr3R 8207539 8207586 chr3R 8208402 8208451 F-element 5 852 0.5 3.5 2.0 1.7 912 chr3R 8207539 intergenic not near genes chr3R 8207995 intergenic not near genes chr3R 8208451 intergenic not near genes chr3R_5_8205001 chr3R_8205001 RAL-383 1965 chr3R 8212997 8213031 chr3R 8213100 8213128 6 97 3.5 3.5 3.5 1.3 131 chr3R 8212997 intergenic not near genes chr3R 8213062 intergenic not near genes chr3R 8213128 intergenic not near genes chr3R_6_8210001 chr3R_8210001 RAL-383 1966 chr3R 8339247 8339247 chr3R 21907534 21907536 4 13568288 18.5 20.5 19.5 0.2 13568289 chr3R 8339247 intergenic not near genes chr3R 15123392 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_4_15120001 chr3R_15120001 RAL-383 1967 chr3R 8393563 8393603 chr3R 8393667 8393688 6 93 2.5 4.0 3.2 1.4 125 chr3R 8393563 intron CG45263 - chr3R 8393626 intron CG45263 - chr3R 8393688 intron CG45263 - chr3R_6_8390001 chr3R_8390001 RAL-383 1968 chr3R 8545140 8545190 chr3R 8545245 8545278 19 98 4.0 4.0 4.0 3.8 138 chr3R 8545140 intergenic not near genes chr3R 8545209 intergenic CR45575 + chr3R 8545278 intergenic CR45575 + chr3R_19_8545001 chr3R_8545001 RAL-383 1969 chr3R 8570460 8570505 chr3R 8575114 8575129 HMS-Beagle 14 4652 2.5 3.0 2.8 3.7 4669 chr3R 8570460 intergenic not near genes chr3R 8572794 intergenic not near genes chr3R 8575129 intergenic not near genes chr3R_14_8570001 chr3R_8570001 RAL-383 1970 chr3R 8601755 8601798 chr3R 8610928 8610971 roo 16 9169 4.0 6.0 5.0 2.7 9216 chr3R 8601755 intron 5-HT2B + chr3R 8606363 intron 5-HT2B + chr3R 8610971 intron 5-HT2B + chr3R_16_8605001 chr3R_8605001 RAL-383 1971 chr3R 8711142 8711178 chr3R 8711327 8711363 11 182 2.0 5.0 3.5 2.4 221 chr3R 8711142 intergenic not near genes chr3R 8711252 intergenic not near genes chr3R 8711363 intergenic not near genes chr3R_11_8710001 chr3R_8710001 RAL-383 1972 chr3R 8894859 8894902 chr3R 8896026 8896078 1360 13 1172 5.0 6.0 5.5 2.0 1219 chr3R 8894859 intron pyd - chr3R 8895468 intron pyd - chr3R 8896078 intron pyd - chr3R_13_8895001 chr3R_8895001 RAL-383 1973 chr3R 8917878 8917894 chr3R 8917978 8917993 5 99 6.0 4.5 5.2 0.8 115 chr3R 8917878 intron pyd - chr3R 8917936 intron pyd - chr3R 8917993 intron pyd - chr3R_5_8915001 chr3R_8915001 RAL-383 1974 chr3R 8917897 8917912 chr3R 8917971 8918012 5 95 2.5 3.5 3.0 1.2 115 chr3R 8917897 intron pyd - chr3R 8917954 intron pyd - chr3R 8918012 intron pyd - chr3R_5_8915001 chr3R_8915001 RAL-383 1975 chr3R 9015971 9016019 chr3R 9016274 9016322 12 294 3.5 2.5 3.0 3.0 351 chr3R 9015971 exon CG11986 + chr3R 9016146 exon CG11986 + chr3R 9016322 intron CG11986 + chr3R_12_9015001 chr3R_9015001 RAL-383 1976 chr3R 9024254 9024305 chr3R 9024907 9024956 18 648 3.0 5.0 4.0 3.6 702 chr3R 9024254 intron neur - chr3R 9024605 intron neur - chr3R 9024956 intron neur - chr3R_18_9020001 chr3R_9020001 RAL-383 1977 chr3R 9043721 9043770 chr3R 9043829 9043845 6 95 2.0 3.0 2.5 1.7 124 chr3R 9043721 intron Nmdmc - chr3R 9043783 intron Nmdmc - chr3R 9043845 intron Nmdmc - chr3R_6_9040001 chr3R_9040001 RAL-383 1978 chr3R 9100834 9100884 chr3R 9101163 9101213 12 327 3.5 2.0 2.8 3.2 379 chr3R 9100834 intron pum - chr3R 9101024 intron pum - chr3R 9101213 intron pum - chr3R_12_9100001 chr3R_9100001 RAL-383 1979 chr3R 9108851 9108872 chr3R 9108941 9108968 9 93 8.5 1.0 4.8 1.6 117 chr3R 9108851 intron pum - chr3R 9108910 intron pum - chr3R 9108968 intron pum - chr3R_9_9105001 chr3R_9105001 RAL-383 1980 chr3R 9204931 9204982 chr3R 9205042 9205095 12 112 3.5 1.0 2.2 3.8 164 chr3R 9204931 intron pum - chr3R 9205013 intron pum - chr3R 9205095 intron pum - chr3R_12_9205001 chr3R_9205001 RAL-383 1981 chr3R 9319556 9319600 chr3R 9320010 9320055 jockey 12 454 8.0 6.0 7.0 1.5 499 chr3R 9319556 intron CG8861 - chr3R 9319806 intron CG8861 - chr3R 9320055 intron CG8861 - chr3R_12_9315001 chr3R_9315001 RAL-383 1982 chr3R 9324344 9324392 chr3R 9324667 9324715 12 323 4.5 1.5 3.0 3.0 371 chr3R 9324344 intron CG8861 - chr3R 9324530 intron CG8861 - chr3R 9324715 intron CG8861 - chr3R_12_9320001 chr3R_9320001 RAL-383 1983 chr3R 9361804 9361847 chr3R 9362065 9362108 pogo 12 261 3.0 4.5 3.8 2.5 304 chr3R 9361804 3` UTR CG45050 + chr3R 9361956 3` UTR CG45050 + chr3R 9362108 3` UTR CG45050 + chr3R_12_9360001 chr3R_9360001 RAL-383 1984 chr3R 9379124 9379176 chr3R 9379226 9379278 9 101 0.0 0.5 0.2 7.5 154 chr3R 9379124 intron FER - chr3R 9379201 intron FER - chr3R 9379278 intron FER - chr3R_9_9375001 chr3R_9375001 RAL-383 1985 chr3R 9382811 9382815 chr3R 9382947 9382960 4 141 6.5 4.5 5.5 0.6 149 chr3R 9382811 intron FER - chr3R 9382886 intron FER - chr3R 9382960 intron FER - chr3R_4_9380001 chr3R_9380001 RAL-383 1986 chr3R 9382829 9382845 chr3R 9382945 9382990 10 137 2.0 4.0 3.0 2.5 161 chr3R 9382829 intron FER - chr3R 9382910 intron FER - chr3R 9382990 intron FER - chr3R_10_9380001 chr3R_9380001 RAL-383 1987 chr3R 9526570 9526613 chr3R 9526672 9526715 14 98 2.5 6.0 4.2 2.7 145 chr3R 9526570 exon CG8176 + chr3R 9526642 3` UTR CG8176 + chr3R 9526715 3` UTR CG8176 + chr3R_14_9525001 chr3R_9525001 RAL-383 1988 chr3R 9586679 9586723 chr3R 9586790 9586835 11 111 4.0 1.5 2.8 2.9 156 chr3R 9586679 intergenic CG8301 +,P58IPK + chr3R 9586757 intergenic CG8301 +,P58IPK + chr3R 9586835 intergenic P58IPK +,CG8301 + chr3R_11_9585001 chr3R_9585001 RAL-383 1989 chr3R 9601455 9601476 chr3R 9601588 9601614 5 137 9.0 4.5 6.8 0.6 159 chr3R 9601455 intron CG8312 + chr3R 9601534 intron CG8312 + chr3R 9601614 intron CG8312 + chr3R_5_9600001 chr3R_9600001 RAL-383 1990 chr3R 9608641 9608664 chr3R 9608927 9608950 7 283 5.0 2.0 3.5 1.6 309 chr3R 9608641 intron CG8312 + chr3R 9608796 intron CG8312 + chr3R 9608950 intron CG8312 + chr3R_7_9605001 chr3R_9605001 RAL-383 1991 chr3R 9898768 9898819 chr3R 9898880 9898931 8 110 5.5 4.5 5.0 1.3 163 chr3R 9898768 intron Glut4EF + chr3R 9898850 intron Glut4EF + chr3R 9898931 intron Glut4EF + chr3R_8_9895001 chr3R_9895001 RAL-383 1992 chr3R 10231764 10231815 chr3R 10237361 10237402 mdg3 20 5596 4.0 2.0 3.0 5.0 5638 chr3R 10231764 intron CG42795 + chr3R 10234583 intron CG42795 + chr3R 10237402 intron CG42795 + chr3R_20_10230001 chr3R_10230001 RAL-383 1993 chr3R 10255363 10255383 chr3R 10260823 10260843 I-element 6 5460 9.0 4.0 6.5 0.8 5480 chr3R 10255363 3` UTR Sirt6 - chr3R 10258103 intron Sirt6 - chr3R 10260843 exon Sirt6 - chr3R_6_10255001 chr3R_10255001 RAL-383 1994 chr3R 10264357 10264371 chr3R 10264445 10264470 6 92 3.5 3.0 3.2 1.4 113 chr3R 10264357 5` UTR CG43143 + chr3R 10264414 5` UTR CG43143 + chr3R 10264470 5` UTR CG43143 + chr3R_6_10260001 chr3R_10260001 RAL-383 1995 chr3R 10531862 10531897 chr3R 10531954 10531962 10 93 6.0 0.0 3.0 2.5 100 chr3R 10531862 intron hth - chr3R 10531912 intron hth - chr3R 10531962 intron hth - chr3R_10_10530001 chr3R_10530001 RAL-383 1996 chr3R 10535315 10535340 chr3R 10535428 10535453 9 113 4.0 0.0 2.0 3.0 138 chr3R 10535315 intron hth - chr3R 10535384 intron hth - chr3R 10535453 intron hth - chr3R_9_10535001 chr3R_10535001 RAL-383 1997 chr3R 10586159 10586189 chr3R 10586261 10586291 6 102 4.0 5.0 4.5 1.1 132 chr3R 10586159 intron hth - chr3R 10586225 intron hth - chr3R 10586291 intron hth - chr3R_6_10585001 chr3R_10585001 RAL-383 1998 chr3R 10594573 10594624 chr3R 10594678 10594729 10 105 5.0 1.0 3.0 2.5 156 chr3R 10594573 intron hth - chr3R 10594651 intron hth - chr3R 10594729 intron hth - chr3R_10_10590001 chr3R_10590001 RAL-383 1999 chr3R 10626982 10626986 chr3R 10627334 10627370 5 373 3.5 4.5 4.0 1.0 388 chr3R 10626982 intergenic not near genes chr3R 10627176 intergenic not near genes chr3R 10627370 intergenic not near genes chr3R_5_10625001 chr3R_10625001 RAL-383 2000 chr3R 10627597 10627628 chr3R 10627729 10627756 7 129 6.0 5.5 5.8 1.0 159 chr3R 10627597 intergenic not near genes chr3R 10627676 intergenic not near genes chr3R 10627756 intergenic not near genes chr3R_7_10625001 chr3R_10625001 RAL-383 2001 chr3R 10689914 10689930 chr3R 10690171 10690187 8 255 0.5 5.0 2.8 2.1 273 chr3R 10689914 intron Skeletor + chr3R 10690050 intron Skeletor + chr3R 10690187 intron Skeletor + chr3R_8_10690001 chr3R_10690001 RAL-383 2002 chr3R 10727638 10727676 chr3R 10727727 10727771 8 94 1.5 4.0 2.8 2.1 133 chr3R 10727638 intergenic not near genes chr3R 10727704 intergenic not near genes chr3R 10727771 intergenic not near genes chr3R_8_10725001 chr3R_10725001 RAL-383 2003 chr3R 10785790 10785840 chr3R 10785889 10785939 13 98 3.5 7.0 5.2 2.1 149 chr3R 10785790 intron Rbp1 + chr3R 10785864 intron Rbp1 + chr3R 10785939 intron Rbp1 + chr3R_13_10785001 chr3R_10785001 RAL-383 2004 chr3R 10804153 10804200 chr3R 10811705 10811752 17.6 7 7552 4.5 3.0 3.8 1.5 7599 chr3R 10804153 intergenic CG14692 - chr3R 10807952 intergenic not near genes chr3R 10811752 3` UTR CG14693 - chr3R_7_10805001 chr3R_10805001 RAL-383 2005 chr3R 10851509 10851558 chr3R 10851606 10851634 16 94 4.5 4.0 4.2 3.1 125 chr3R 10851509 3` UTR CG42394 + chr3R 10851572 3` UTR CG42394 + chr3R 10851634 3` UTR CG42394 + chr3R_16_10850001 chr3R_10850001 RAL-383 2006 chr3R 10919676 10919713 chr3R 10919773 10919807 9 97 3.0 4.0 3.5 2.0 131 chr3R 10919676 intergenic not near genes chr3R 10919742 intergenic not near genes chr3R 10919807 intergenic not near genes chr3R_9_10915001 chr3R_10915001 RAL-383 2007 chr3R 10920033 10920068 chr3R 10920127 10920163 9 96 4.5 4.5 4.5 1.6 130 chr3R 10920033 intergenic not near genes chr3R 10920098 intergenic not near genes chr3R 10920163 intergenic not near genes chr3R_9_10920001 chr3R_10920001 RAL-383 2008 chr3R 11048558 11048606 chr3R 11048662 11048701 11 103 0.5 3.5 2.0 3.7 143 chr3R 11048558 3` UTR CG34114 + chr3R 11048630 3` UTR CG34114 + chr3R 11048701 3` UTR CG34114 + chr3R_11_11045001 chr3R_11045001 RAL-383 2009 chr3R 11056875 11056896 chr3R 11056973 11056994 9 98 5.5 0.0 2.8 2.4 119 chr3R 11056875 intergenic not near genes chr3R 11056934 intergenic not near genes chr3R 11056994 intergenic not near genes chr3R_9_11055001 chr3R_11055001 RAL-383 2010 chr3R 11103151 11103165 chr3R 11103253 11103267 4 102 0.0 0.0 0.0 4.0 116 chr3R 11103151 intergenic not near genes chr3R 11103209 intergenic not near genes chr3R 11103267 intergenic not near genes chr3R_4_11100001 chr3R_11100001 RAL-383 2011 chr3R 11149859 11149903 chr3R 11149966 11150020 8 107 3.0 2.0 2.5 2.3 161 chr3R 11149859 intergenic not near genes chr3R 11149940 intergenic not near genes chr3R 11150020 intergenic not near genes chr3R_8_11145001 chr3R_11145001 RAL-383 2012 chr3R 11155023 11155065 chr3R 11155121 11155163 17 98 2.5 5.5 4.0 3.4 140 chr3R 11155023 intron Ugt86Dc + chr3R 11155093 intron Ugt86Dc + chr3R 11155163 intron Ugt86Dc + chr3R_17_11155001 chr3R_11155001 RAL-383 2013 chr3R 11342539 11342570 chr3R 11342634 11342666 9 96 8.0 4.0 6.0 1.3 127 chr3R 11342539 intron pros + chr3R 11342602 intron pros + chr3R 11342666 intron pros + chr3R_9_11340001 chr3R_11340001 RAL-383 2014 chr3R 11379217 11379263 chr3R 11388392 11388425 roo 15 9172 5.5 4.5 5.0 2.5 9208 chr3R 11379217 intron pros + chr3R 11383821 intron pros + chr3R 11388425 intron pros + chr3R_15_11380001 chr3R_11380001 RAL-383 2015 chr3R 11518798 11518830 chr3R 11518909 11518936 10 109 6.0 3.0 4.5 1.8 138 chr3R 11518798 intergenic not near genes chr3R 11518867 intergenic not near genes chr3R 11518936 intergenic not near genes chr3R_10_11515001 chr3R_11515001 RAL-383 2016 chr3R 11708630 11708663 chr3R 11708843 11708891 15 224 2.0 2.0 2.0 5.0 261 chr3R 11708630 intergenic not near genes chr3R 11708760 intergenic not near genes chr3R 11708891 intergenic not near genes chr3R_15_11705001 chr3R_11705001 RAL-383 2017 chr3R 11734148 11734170 chr3R 11734287 11734309 6 139 5.0 2.0 3.5 1.3 161 chr3R 11734148 intergenic not near genes chr3R 11734228 intergenic not near genes chr3R 11734309 intergenic not near genes chr3R_6_11730001 chr3R_11730001 RAL-383 2018 chr3R 11734172 11734188 chr3R 11734282 11734303 8 125 3.0 2.0 2.5 2.3 131 chr3R 11734172 intergenic not near genes chr3R 11734238 intergenic not near genes chr3R 11734303 intergenic not near genes chr3R_8_11730001 chr3R_11730001 RAL-383 2019 chr3R 11811070 11811121 chr3R 11811185 11811200 18 109 1.5 5.5 3.5 4.0 130 chr3R 11811070 5` UTR ClC-a - chr3R 11811135 5` UTR ClC-a - chr3R 11811200 intron ClC-a - chr3R_18_11810001 chr3R_11810001 RAL-383 2020 chr3R 11841056 11841094 chr3R 11846255 11846259 BS 10 5200 2.0 3.0 2.5 2.9 5203 chr3R 11841056 intron CG6959 - chr3R 11843658 intron CG6959 - chr3R 11846259 intron CG6959 - chr3R_10_11840001 chr3R_11840001 RAL-383 2021 chr3R 12022871 12022914 chr3R 12025068 12025111 pogo 17 2195 0.5 4.5 2.5 4.9 2240 chr3R 12022871 intergenic not near genes chr3R 12023991 intergenic not near genes chr3R 12025111 intergenic not near genes chr3R_17_12020001 chr3R_12020001 RAL-383 2022 chr3R 12045156 12045199 chr3R 12045252 12045288 11 94 2.0 4.5 3.2 2.6 132 chr3R 12045156 intergenic not near genes chr3R 12045222 intergenic not near genes chr3R 12045288 intergenic not near genes chr3R_11_12045001 chr3R_12045001 RAL-383 2023 chr3R 12080847 12080895 chr3R 12080943 12080993 10 97 5.5 4.0 4.8 1.7 146 chr3R 12080847 intron CG14741 - chr3R 12080920 intron CG14741 - chr3R 12080993 intron CG14741 - chr3R_10_12080001 chr3R_12080001 RAL-383 2024 chr3R 12111891 12111920 chr3R 12111985 12112012 10 93 2.5 4.0 3.2 2.4 121 chr3R 12111891 intergenic dpr17 + chr3R 12111952 intergenic not near genes chr3R 12112012 intergenic not near genes chr3R_10_12110001 chr3R_12110001 RAL-383 2025 chr3R 12117502 12117543 chr3R 12117911 12117949 8 400 2.5 1.5 2.0 2.7 447 chr3R 12117502 intergenic not near genes chr3R 12117726 intergenic not near genes chr3R 12117949 intergenic not near genes chr3R_8_12115001 chr3R_12115001 RAL-383 2026 chr3R 12176667 12176704 chr3R 12176780 12176806 4 109 2.0 1.5 1.8 1.4 139 chr3R 12176667 intergenic not near genes chr3R 12176736 intergenic not near genes chr3R 12176806 intergenic not near genes chr3R_4_12175001 chr3R_12175001 RAL-383 2027 chr3R 12183175 12183201 chr3R 12183281 12183307 6 106 2.0 8.0 5.0 1.0 132 chr3R 12183175 intergenic not near genes chr3R 12183241 intergenic not near genes chr3R 12183307 intergenic not near genes chr3R_6_12180001 chr3R_12180001 RAL-383 2028 chr3R 12247127 12247172 chr3R 12247232 12247277 15 105 7.0 3.5 5.2 2.4 150 chr3R 12247127 intergenic not near genes chr3R 12247202 intergenic not near genes chr3R 12247277 intergenic not near genes chr3R_15_12245001 chr3R_12245001 RAL-383 2029 chr3R 12267840 12267886 chr3R 12267940 12267986 10 100 2.5 5.5 4.0 2.0 146 chr3R 12267840 intron svp + chr3R 12267913 intron svp + chr3R 12267986 intron svp + chr3R_10_12265001 chr3R_12265001 RAL-383 2030 chr3R 12328145 12328186 chr3R 12328276 12328319 10 131 6.0 2.5 4.2 1.9 174 chr3R 12328145 intergenic CR45584 + chr3R 12328232 intergenic CR45584 + chr3R 12328319 intergenic CR45584 + chr3R_10_12325001 chr3R_12325001 RAL-383 2031 chr3R 12348812 12348865 chr3R 12348910 12348963 11 94 3.0 4.0 3.5 2.4 151 chr3R 12348812 intergenic CG10038 - chr3R 12348888 intergenic CG10038 - chr3R 12348963 intergenic CG10038 - chr3R_11_12345001 chr3R_12345001 RAL-383 2032 chr3R 12376374 12376417 chr3R 12376480 12376522 7 105 2.0 4.0 3.0 1.8 148 chr3R 12376374 exon GstD5 + chr3R 12376448 3` UTR GstD5 + chr3R 12376522 3` UTR GstD5 + chr3R_7_12375001 chr3R_12375001 RAL-383 2033 chr3R 12392872 12392896 chr3R 12392992 12393004 4 116 6.0 7.5 6.8 0.5 132 chr3R 12392872 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12392938 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12393004 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R_4_12390001 chr3R_12390001 RAL-383 2034 chr3R 12599353 12599405 chr3R 12599456 12599508 6 98 1.5 4.0 2.8 1.6 155 chr3R 12599353 intergenic not near genes chr3R 12599430 intergenic not near genes chr3R 12599508 intergenic not near genes chr3R_6_12595001 chr3R_12595001 RAL-383 2035 chr3R 12763114 12763143 chr3R 12763211 12763240 10 97 0.0 3.5 1.8 3.6 126 chr3R 12763114 intron beat-Vc - chr3R 12763177 intron beat-Vc - chr3R 12763240 intron beat-Vc - chr3R_10_12760001 chr3R_12760001 RAL-383 2036 chr3R 12819032 12819048 chr3R 12819132 12819151 5 102 4.5 10.5 7.5 0.6 119 chr3R 12819032 intergenic not near genes chr3R 12819092 intergenic not near genes chr3R 12819151 intergenic not near genes chr3R_5_12815001 chr3R_12815001 RAL-383 2037 chr3R 12864542 12864574 chr3R 12865047 12865079 roo 5 502 0.5 4.0 2.2 1.6 537 chr3R 12864542 intergenic not near genes chr3R 12864810 intergenic not near genes chr3R 12865079 intergenic not near genes chr3R_5_12860001 chr3R_12860001 RAL-383 2038 chr3R 12877634 12877675 chr3R 12877868 12877909 18 228 5.0 3.5 4.2 3.5 275 chr3R 12877634 intergenic not near genes chr3R 12877772 intergenic not near genes chr3R 12877909 intergenic not near genes chr3R_18_12875001 chr3R_12875001 RAL-383 2039 chr3R 12920144 12920181 chr3R 12925366 12925395 copia 12 5217 0.5 6.0 3.2 2.9 5251 chr3R 12920144 intron beat-Vb + chr3R 12922770 intron beat-Vb + chr3R 12925395 intron beat-Vb + chr3R_12_12920001 chr3R_12920001 RAL-383 2040 chr3R 13059944 13059977 chr3R 13060157 13060192 9 213 2.5 3.5 3.0 2.2 248 chr3R 13059944 intron sim + chr3R 13060068 intron sim + chr3R 13060192 intron sim + chr3R_9_13060001 chr3R_13060001 RAL-383 2041 chr3R 13061861 13061911 chr3R 13061976 13062024 20 113 2.0 2.0 2.0 6.7 163 chr3R 13061861 intron sim + chr3R 13061942 intron sim + chr3R 13062024 intron sim + chr3R_20_13060001 chr3R_13060001 RAL-383 2042 chr3R 13066984 13067172 chr3R 13067091 13067296 13 122 3.5 3.5 3.5 2.9 312 chr3R 13066984 intron sim + chr3R 13067140 intron sim + chr3R 13067296 intron sim + chr3R_13_13065001 chr3R_13065001 RAL-383 2043 chr3R 13075342 13075368 chr3R 13075443 13075469 7 101 5.0 1.5 3.2 1.7 127 chr3R 13075342 intron sim + chr3R 13075406 intron sim + chr3R 13075469 intron sim + chr3R_7_13075001 chr3R_13075001 RAL-383 2044 chr3R 13104316 13104335 chr3R 13104500 13104519 5 183 3.5 7.5 5.5 0.8 203 chr3R 13104316 intron timeout + chr3R 13104418 intron timeout + chr3R 13104519 intron timeout + chr3R_5_13100001 chr3R_13100001 RAL-383 2045 chr3R 13104419 13104420 chr3R 21907534 21907536 8 8803116 0.5 20.5 10.5 0.7 8803117 chr3R 13104419 intron timeout + chr3R 17505978 intergenic Dscam3 - chr3R 21907536 intergenic CG6678 + chr3R_8_17505001 chr3R_17505001 RAL-383 2046 chr3R 13114460 13114510 chr3R 13114569 13114578 9 104 4.0 2.0 3.0 2.2 118 chr3R 13114460 intron timeout + chr3R 13114519 intron timeout + chr3R 13114578 intron timeout + chr3R_9_13110001 chr3R_13110001 RAL-383 2047 chr3R 13120754 13120795 chr3R 13120851 13120882 6 93 4.0 3.5 3.8 1.2 128 chr3R 13120754 intron timeout + chr3R 13120818 intron timeout + chr3R 13120882 intron timeout + chr3R_6_13120001 chr3R_13120001 RAL-383 2048 chr3R 13135819 13135843 chr3R 13138004 13138027 pogo 7 2183 3.0 2.5 2.8 1.8 2208 chr3R 13135819 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136923 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138027 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_7_13135001 chr3R_13135001 RAL-383 2049 chr3R 13143018 13143055 chr3R 13148615 13148652 mdg3 10 5591 3.0 3.5 3.2 2.4 5634 chr3R 13143018 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145835 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148652 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_10_13145001 chr3R_13145001 RAL-383 2050 chr3R 13143057 13143066 chr3R 13148614 13148663 mdg3 4 5580 2.0 3.5 2.8 1.1 5606 chr3R 13143057 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145860 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148663 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_4_13145001 chr3R_13145001 RAL-383 2051 chr3R 13195951 13195984 chr3R 13196053 13196099 8 109 2.5 3.0 2.8 2.1 148 chr3R 13195951 intergenic not near genes chr3R 13196025 intergenic not near genes chr3R 13196099 intergenic not near genes chr3R_8_13195001 chr3R_13195001 RAL-383 2052 chr3R 13197154 13197207 chr3R 13198454 13198507 8 1300 5.5 26.5 16.0 0.5 1353 chr3R 13197154 intergenic not near genes chr3R 13197830 intergenic not near genes chr3R 13198507 intergenic not near genes chr3R_8_13195001 chr3R_13195001 RAL-383 2053 chr3R 13197024 13197036 chr3R 13198474 13198525 10 1454 12.5 26.0 19.2 0.5 1501 chr3R 13197024 intergenic not near genes chr3R 13197774 intergenic not near genes chr3R 13198525 intergenic not near genes chr3R_10_13195001 chr3R_13195001 RAL-383 2054 chr3R 13201762 13201800 chr3R 13201879 13201917 19 116 0.0 9.0 4.5 3.5 155 chr3R 13201762 intergenic not near genes chr3R 13201840 intergenic not near genes chr3R 13201917 intergenic not near genes chr3R_19_13200001 chr3R_13200001 RAL-383 2055 chr3R 13206633 13206668 chr3R 13206890 13206918 8 255 3.5 3.5 3.5 1.8 285 chr3R 13206633 intergenic not near genes chr3R 13206776 intergenic not near genes chr3R 13206918 intergenic not near genes chr3R_8_13205001 chr3R_13205001 RAL-383 2056 chr3R 13348987 13349033 chr3R 13349082 13349129 15 96 3.0 3.5 3.2 3.6 142 chr3R 13348987 intergenic not near genes chr3R 13349058 intergenic not near genes chr3R 13349129 intergenic not near genes chr3R_15_13345001 chr3R_13345001 RAL-383 2057 chr3R 13418644 13418681 chr3R 13418740 13418777 11 96 3.0 4.0 3.5 2.4 133 chr3R 13418644 intergenic not near genes chr3R 13418710 intergenic not near genes chr3R 13418777 intergenic not near genes chr3R_11_13415001 chr3R_13415001 RAL-383 2058 chr3R 13496613 13496619 chr3R 13496709 13496717 4 98 6.5 2.5 4.5 0.7 104 chr3R 13496613 intergenic not near genes chr3R 13496665 intergenic not near genes chr3R 13496717 intergenic not near genes chr3R_4_13495001 chr3R_13495001 RAL-383 2059 chr3R 13517209 13517255 chr3R 13520046 13520092 jockey 4 2837 4.0 0.0 2.0 1.3 2883 chr3R 13517209 intergenic not near genes chr3R 13518650 intergenic not near genes chr3R 13520092 intergenic not near genes chr3R_4_13515001 chr3R_13515001 RAL-383 2060 chr3R 13575657 13575684 chr3R 13575920 13575934 6 257 4.0 3.5 3.8 1.2 277 chr3R 13575657 intergenic CR43848 + chr3R 13575796 intergenic CR43848 + chr3R 13575934 intergenic CR43848 + chr3R_6_13575001 chr3R_13575001 RAL-383 2061 chr3R 13598068 13598115 chr3R 13598166 13598213 21 96 2.5 5.0 3.8 4.4 145 chr3R 13598068 intergenic not near genes chr3R 13598140 intergenic not near genes chr3R 13598213 intergenic not near genes chr3R_21_13595001 chr3R_13595001 RAL-383 2062 chr3R 13603036 13603066 chr3R 13603147 13603177 10 111 4.5 1.5 3.0 2.5 141 chr3R 13603036 intergenic not near genes chr3R 13603106 intergenic not near genes chr3R 13603177 intergenic not near genes chr3R_10_13600001 chr3R_13600001 RAL-383 2063 chr3R 13659740 13659835 chr3R 13659842 13659944 5 108 0.0 0.0 0.0 5.0 204 chr3R 13659740 intron Hrb87F - chr3R 13659842 intron Hrb87F - chr3R 13659944 intron Hrb87F - chr3R_5_13655001 chr3R_13655001 RAL-383 2064 chr3R 13693028 13693028 chr3R 21907534 21907536 9 8214507 22.5 20.5 21.5 0.4 8214508 chr3R 13693028 3` UTR flfl + chr3R 17800282 exon CG17803 - chr3R 21907536 intergenic CG6678 + chr3R_9_17800001 chr3R_17800001 RAL-383 2065 chr3R 13714501 13714551 chr3R 13714660 13714710 17 159 0.0 4.5 2.2 5.3 209 chr3R 13714501 intergenic CR34044 - chr3R 13714606 intergenic CR34044 - chr3R 13714710 intergenic CG34383 + chr3R_17_13710001 chr3R_13710001 RAL-383 2066 chr3R 13782032 13782087 chr3R 13782133 13782188 14 99 2.5 0.5 1.5 5.6 156 chr3R 13782032 exon CG9286 + chr3R 13782110 intergenic CG9286 +,Dip-B + chr3R 13782188 intergenic Dip-B +,CG9286 + chr3R_14_13780001 chr3R_13780001 RAL-383 2067 chr3R 13850290 13850334 chr3R 13850405 13850436 4 112 0.0 0.5 0.2 3.3 146 chr3R 13850290 intergenic not near genes chr3R 13850363 intergenic not near genes chr3R 13850436 intergenic not near genes chr3R_4_13850001 chr3R_13850001 RAL-383 2068 chr3R 13863702 13863715 chr3R 13863768 13863815 5 97 3.5 3.0 3.2 1.2 113 chr3R 13863702 intergenic not near genes chr3R 13863758 intergenic not near genes chr3R 13863815 intergenic not near genes chr3R_5_13860001 chr3R_13860001 RAL-383 2069 chr3R 13958533 13958574 chr3R 13958649 13958659 9 112 5.0 3.0 4.0 1.8 126 chr3R 13958533 intergenic Ipp + chr3R 13958596 intergenic Ipp + chr3R 13958659 intergenic Ipp + chr3R_9_13955001 chr3R_13955001 RAL-383 2070 chr3R 13975361 13975404 chr3R 13975460 13975504 14 97 3.0 3.5 3.2 3.3 143 chr3R 13975361 intron rdx - chr3R 13975432 intron rdx - chr3R 13975504 intron rdx - chr3R_14_13975001 chr3R_13975001 RAL-383 2071 chr3R 14021634 14021656 chr3R 14023474 14023501 S-element 4 1844 6.5 5.5 6.0 0.6 1867 chr3R 14021634 intron rdx - chr3R 14022568 intron rdx - chr3R 14023501 intron rdx - chr3R_4_14020001 chr3R_14020001 RAL-383 2072 chr3R 14029842 14029863 chr3R 14029950 14029971 8 107 1.5 5.0 3.2 1.9 129 chr3R 14029842 intron,intron rdx -,Cyp6d5 + chr3R 14029906 intron,intron rdx -,Cyp6d5 + chr3R 14029971 intron,intron rdx -,Cyp6d5 + chr3R_8_14025001 chr3R_14025001 RAL-383 2073 chr3R 14047764 14047805 chr3R 14047868 14047915 5 109 0.0 4.5 2.2 1.6 151 chr3R 14047764 intergenic not near genes chr3R 14047840 intergenic not near genes chr3R 14047915 intergenic not near genes chr3R_5_14045001 chr3R_14045001 RAL-383 2074 chr3R 7773344 7773344 chr3R 14104440 14104440 4 6331096 10.5 16.0 13.2 0.3 6331096 chr3R 7773344 intergenic not near genes chr3R 10938892 intergenic not near genes chr3R 14104440 intergenic CG12402 - chr3R_4_10935001 chr3R_10935001 RAL-383 2075 chr3R 14117429 14117440 chr3R 14117525 14117536 7 96 12.0 6.5 9.2 0.7 107 chr3R 14117429 intron Kif19A - chr3R 14117482 intron Kif19A - chr3R 14117536 intron Kif19A - chr3R_7_14115001 chr3R_14115001 RAL-383 2076 chr3R 14117449 14117468 chr3R 14117518 14117563 12 94 10.0 6.5 8.2 1.3 114 chr3R 14117449 intron Kif19A - chr3R 14117506 intron Kif19A - chr3R 14117563 intron Kif19A - chr3R_12_14115001 chr3R_14115001 RAL-383 2077 chr3R 14180795 14180833 chr3R 14185580 14185618 F-element 9 4784 2.5 3.5 3.0 2.2 4823 chr3R 14180795 intron Dop1R1 - chr3R 14183206 intron Dop1R1 - chr3R 14185618 intron Dop1R1 - chr3R_9_14180001 chr3R_14180001 RAL-383 2078 chr3R 14194424 14194452 chr3R 14203585 14203621 roo 10 9168 8.0 7.0 7.5 1.2 9197 chr3R 14194424 intron Dop1R1 - chr3R 14199022 intron Dop1R1 - chr3R 14203621 intron Dop1R1 - chr3R_10_14195001 chr3R_14195001 RAL-383 2079 chr3R 14194454 14194461 chr3R 14203583 14203623 roo 4 9157 7.0 7.0 7.0 0.5 9169 chr3R 14194454 intron Dop1R1 - chr3R 14199038 intron Dop1R1 - chr3R 14203623 intron Dop1R1 - chr3R_4_14195001 chr3R_14195001 RAL-383 2080 chr3R 14246384 14246406 chr3R 14247895 14247922 jockey 5 1511 4.0 5.5 4.8 0.9 1538 chr3R 14246384 intergenic not near genes chr3R 14247153 intergenic not near genes chr3R 14247922 intergenic not near genes chr3R_5_14245001 chr3R_14245001 RAL-383 2081 chr3R 14248722 14248735 chr3R 14248820 14248833 4 98 3.5 1.5 2.5 1.1 111 chr3R 14248722 intergenic not near genes chr3R 14248778 intergenic not near genes chr3R 14248833 intergenic not near genes chr3R_4_14245001 chr3R_14245001 RAL-383 2082 chr3R 14253687 14253721 chr3R 14253783 14253820 12 99 2.0 2.0 2.0 4.0 133 chr3R 14253687 intron Aats-met - chr3R 14253754 intron Aats-met - chr3R 14253820 intron Aats-met - chr3R_12_14250001 chr3R_14250001 RAL-383 2083 chr3R 14364040 14364087 chr3R 14364136 14364143 9 83 5.5 4.0 4.8 1.6 103 chr3R 14364040 intron NK7.1 - chr3R 14364092 intron NK7.1 - chr3R 14364143 intron NK7.1 - chr3R_9_14360001 chr3R_14360001 RAL-383 2084 chr3R 14386192 14386237 chr3R 14386296 14386341 5 104 0.0 2.5 1.2 2.3 149 chr3R 14386192 intergenic not near genes chr3R 14386266 intergenic not near genes chr3R 14386341 intergenic not near genes chr3R_5_14385001 chr3R_14385001 RAL-383 2085 chr3R 14458897 14458904 chr3R 14458987 14459005 5 99 2.0 2.5 2.2 1.6 108 chr3R 14458897 intron cv-c - chr3R 14458951 intron cv-c - chr3R 14459005 intron cv-c - chr3R_5_14455001 chr3R_14455001 RAL-383 2086 chr3R 14527403 14527412 chr3R 14527479 14527509 4 92 9.0 3.0 6.0 0.6 106 chr3R 14527403 intron Pde6 - chr3R 14527456 intron Pde6 - chr3R 14527509 intron Pde6 - chr3R_4_14525001 chr3R_14525001 RAL-383 2087 chr3R 14546028 14546073 chr3R 14546123 14546160 7 95 4.0 0.0 2.0 2.3 132 chr3R 14546028 intron Pde6 - chr3R 14546094 intron Pde6 - chr3R 14546160 intron Pde6 - chr3R_7_14545001 chr3R_14545001 RAL-383 2088 chr3R 14608451 14608473 chr3R 14608563 14608585 8 112 2.0 5.0 3.5 1.8 134 chr3R 14608451 intergenic stumps + chr3R 14608518 intergenic stumps + chr3R 14608585 intergenic not near genes chr3R_8_14605001 chr3R_14605001 RAL-383 2089 chr3R 14744449 14744494 chr3R 14744565 14744610 19 115 3.0 4.5 3.8 4.0 161 chr3R 14744449 intron jvl + chr3R 14744530 intron jvl + chr3R 14744610 intron jvl + chr3R_19_14740001 chr3R_14740001 RAL-383 2090 chr3R 14764549 14764576 chr3R 14764667 14764696 4 120 2.5 2.0 2.2 1.2 147 chr3R 14764549 intron jvl + chr3R 14764622 intron jvl + chr3R 14764696 intron jvl + chr3R_4_14760001 chr3R_14760001 RAL-383 2091 chr3R 14776001 14776031 chr3R 14776110 14776128 5 107 2.5 5.0 3.8 1.0 127 chr3R 14776001 intron jvl + chr3R 14776064 intron jvl + chr3R 14776128 intron jvl + chr3R_5_14775001 chr3R_14775001 RAL-383 2092 chr3R 14779067 14779073 chr3R 14779167 14779173 5 100 5.0 7.0 6.0 0.7 106 chr3R 14779067 intron jvl + chr3R 14779120 intron jvl + chr3R 14779173 intron jvl + chr3R_5_14775001 chr3R_14775001 RAL-383 2093 chr3R 14879025 14879060 chr3R 14879129 14879164 4 104 3.0 1.5 2.2 1.2 139 chr3R 14879025 intergenic CG3631 + chr3R 14879094 intergenic CG3631 + chr3R 14879164 intergenic CG3631 + chr3R_4_14875001 chr3R_14875001 RAL-383 2094 chr3R 14882802 14882835 chr3R 14882889 14882912 12 88 3.0 1.5 2.2 3.8 110 chr3R 14882802 exon Rrp6 - chr3R 14882857 intron Rrp6 - chr3R 14882912 exon Rrp6 - chr3R_12_14880001 chr3R_14880001 RAL-383 2095 chr3R 15026313 15026334 chr3R 15026419 15026439 6 106 3.0 2.0 2.5 1.7 126 chr3R 15026313 intergenic not near genes chr3R 15026376 intergenic not near genes chr3R 15026439 intergenic not near genes chr3R_6_15025001 chr3R_15025001 RAL-383 2096 chr3R 15036254 15036309 chr3R 15036434 15036480 10 177 3.5 3.5 3.5 2.2 226 chr3R 15036254 intergenic not near genes chr3R 15036367 intergenic not near genes chr3R 15036480 intergenic not near genes chr3R_10_15035001 chr3R_15035001 RAL-383 2097 chr3R 15041410 15041414 chr3R 15045205 15045218 Doc 4 3802 0.0 5.5 2.8 1.1 3808 chr3R 15041410 intergenic not near genes chr3R 15043314 intergenic not near genes chr3R 15045218 intergenic not near genes chr3R_4_15040001 chr3R_15040001 RAL-383 2098 chr3R 15059258 15059480 chr3R 15059472 15059587 BS 17 200 0.0 0.0 0.0 17.0 329 chr3R 15059258 intron dpr9 - chr3R 15059422 intron dpr9 - chr3R 15059587 intron dpr9 - chr3R_17_15055001 chr3R_15055001 RAL-383 2099 chr3R 15079786 15079830 chr3R 15080047 15080091 pogo 12 260 3.0 3.5 3.2 2.9 305 chr3R 15079786 3` UTR CG6966 - chr3R 15079938 3` UTR CG6966 - chr3R 15080091 3` UTR CG6966 - chr3R_12_15075001 chr3R_15075001 RAL-383 2100 chr3R 15088075 15088095 chr3R 15088193 15088195 6 112 5.0 2.0 3.5 1.3 120 chr3R 15088075 intron CG6966 - chr3R 15088135 intron CG6966 - chr3R 15088195 intron CG6966 - chr3R_6_15085001 chr3R_15085001 RAL-383 2101 chr3R 15102480 15102526 chr3R 15109755 15109801 412 14 7273 0.5 4.0 2.2 4.4 7321 chr3R 15102480 intron CG42788 - chr3R 15106140 intron CG42788 - chr3R 15109801 intron CG42788 - chr3R_14_15105001 chr3R_15105001 RAL-383 2102 chr3R 15132050 15132077 chr3R 15135130 15135130 Juan 6 3075 6.0 7.5 6.8 0.8 3080 chr3R 15132050 intergenic CG42788 - chr3R 15133590 intergenic not near genes chr3R 15135130 intergenic CG6912 - chr3R_6_15130001 chr3R_15130001 RAL-383 2103 chr3R 15146506 15146540 chr3R 15146625 15146648 5 112 0.0 4.5 2.2 1.6 142 chr3R 15146506 intron GlyS - chr3R 15146577 intron GlyS - chr3R 15146648 intron GlyS - chr3R_5_15145001 chr3R_15145001 RAL-383 2104 chr3R 15159308 15159357 chr3R 15159409 15159460 7 103 2.5 1.0 1.8 2.5 152 chr3R 15159308 intron Gyc88E + chr3R 15159384 intron Gyc88E + chr3R 15159460 intron Gyc88E + chr3R_7_15155001 chr3R_15155001 RAL-383 2105 chr3R 15162538 15162555 chr3R 15167326 15167333 F-element 8 4786 6.0 3.5 4.8 1.4 4795 chr3R 15162538 intron Gyc88E + chr3R 15164936 intron Gyc88E + chr3R 15167333 intron Gyc88E + chr3R_8_15160001 chr3R_15160001 RAL-383 2106 chr3R 15167791 15167835 chr3R 15167968 15168011 16 175 3.0 1.0 2.0 5.3 220 chr3R 15167791 intron Gyc88E + chr3R 15167901 intron Gyc88E + chr3R 15168011 intron Gyc88E + chr3R_16_15165001 chr3R_15165001 RAL-383 2107 chr3R 15169329 15169368 chr3R 15169502 15169535 5 171 36.0 20.5 28.2 0.2 206 chr3R 15169329 intron Gyc88E + chr3R 15169432 intron Gyc88E + chr3R 15169535 intron Gyc88E + chr3R_5_15165001 chr3R_15165001 RAL-383 2108 chr3R 15196907 15196954 chr3R 15197548 15197595 10 638 2.0 7.5 4.8 1.7 688 chr3R 15196907 intron CG42542 + chr3R 15197251 intron CG42542 + chr3R 15197595 intron CG42542 + chr3R_10_15195001 chr3R_15195001 RAL-383 2109 chr3R 15224354 15224402 chr3R 15224515 15224563 15 159 1.5 3.5 2.5 4.3 209 chr3R 15224354 exon CG31344 - chr3R 15224458 intron CG31344 - chr3R 15224563 intron CG31344 - chr3R_15_15220001 chr3R_15220001 RAL-383 2110 chr3R 15400276 15400299 chr3R 15400519 15400542 9 243 0.5 2.5 1.5 3.6 266 chr3R 15400276 3` UTR Rbp + chr3R 15400409 3` UTR Rbp + chr3R 15400542 3` UTR Rbp + chr3R_9_15400001 chr3R_15400001 RAL-383 2111 chr3R 15416234 15416261 chr3R 15416329 15416361 6 94 5.5 3.5 4.5 1.1 127 chr3R 15416234 3` UTR Atx2 + chr3R 15416298 3` UTR Atx2 + chr3R 15416361 3` UTR Atx2 + chr3R_6_15415001 chr3R_15415001 RAL-383 2112 chr3R 15416262 15416281 chr3R 15416326 15416381 9 95 2.0 3.0 2.5 2.6 119 chr3R 15416262 3` UTR Atx2 + chr3R 15416322 3` UTR Atx2 + chr3R 15416381 3` UTR Atx2 + chr3R_9_15415001 chr3R_15415001 RAL-383 2113 chr3R 15445890 15445905 chr3R 15445995 15446010 6 105 4.0 0.5 2.2 1.9 120 chr3R 15445890 exon AdamTS-A - chr3R 15445950 intron AdamTS-A - chr3R 15446010 intron AdamTS-A - chr3R_6_15445001 chr3R_15445001 RAL-383 2114 chr3R 15502594 15502633 chr3R 15502694 15502710 8 95 5.5 0.5 3.0 2.0 116 chr3R 15502594 intergenic not near genes chr3R 15502652 intergenic not near genes chr3R 15502710 intergenic not near genes chr3R_8_15500001 chr3R_15500001 RAL-383 2115 chr3R 15517581 15517620 chr3R 15517684 15517703 5 99 4.0 2.5 3.2 1.2 122 chr3R 15517581 intergenic not near genes chr3R 15517642 intergenic not near genes chr3R 15517703 intergenic not near genes chr3R_5_15515001 chr3R_15515001 RAL-383 2116 chr3R 15578073 15578107 chr3R 15578187 15578195 6 106 4.5 4.5 4.5 1.1 122 chr3R 15578073 intergenic not near genes chr3R 15578134 intergenic not near genes chr3R 15578195 intergenic not near genes chr3R_6_15575001 chr3R_15575001 RAL-383 2117 chr3R 15594654 15594671 chr3R 15594748 15594774 5 101 0.0 7.0 3.5 1.1 120 chr3R 15594654 intergenic not near genes chr3R 15594714 intergenic not near genes chr3R 15594774 intergenic not near genes chr3R_5_15590001 chr3R_15590001 RAL-383 2118 chr3R 15601149 15601195 chr3R 15608691 15608737 412 14 7538 6.0 7.5 6.8 1.8 7588 chr3R 15601149 intergenic not near genes chr3R 15604943 intergenic not near genes chr3R 15608737 intergenic not near genes chr3R_14_15600001 chr3R_15600001 RAL-383 2119 chr3R 15618721 15618763 chr3R 15626209 15626257 blood 11 7490 4.0 6.5 5.2 1.8 7536 chr3R 15618721 intergenic not near genes chr3R 15622489 intergenic not near genes chr3R 15626257 intergenic not near genes chr3R_11_15620001 chr3R_15620001 RAL-383 2120 chr3R 15635188 15635234 chr3R 15635329 15635366 11 140 0.0 2.5 1.2 5.0 178 chr3R 15635188 intergenic CG43335 + chr3R 15635277 intergenic CG43335 + chr3R 15635366 intergenic CG43335 + chr3R_11_15635001 chr3R_15635001 RAL-383 2121 chr3R 15646779 15646800 chr3R 15646882 15646903 4 103 2.5 6.0 4.2 0.8 124 chr3R 15646779 intergenic not near genes chr3R 15646841 intergenic not near genes chr3R 15646903 intergenic not near genes chr3R_4_15645001 chr3R_15645001 RAL-383 2122 chr3R 15691167 15691328 chr3R 15691292 15691435 16 112 0.5 0.5 0.5 10.7 268 chr3R 15691167 intergenic not near genes chr3R 15691301 intergenic not near genes chr3R 15691435 intergenic not near genes chr3R_16_15690001 chr3R_15690001 RAL-383 2123 chr3R 15734159 15734194 chr3R 15734263 15734304 5 109 7.0 3.5 5.2 0.8 145 chr3R 15734159 intergenic not near genes chr3R 15734232 intergenic not near genes chr3R 15734304 intergenic not near genes chr3R_5_15730001 chr3R_15730001 RAL-383 2124 chr3R 15735226 15735237 chr3R 15739966 15739975 F-element 4 4740 2.0 8.5 5.2 0.6 4749 chr3R 15735226 intergenic not near genes chr3R 15737600 intergenic not near genes chr3R 15739975 intergenic not near genes chr3R_4_15735001 chr3R_15735001 RAL-383 2125 chr3R 15756618 15756628 chr3R 15756717 15756727 5 99 13.0 6.5 9.8 0.5 109 chr3R 15756618 intergenic not near genes chr3R 15756672 intergenic not near genes chr3R 15756727 intergenic not near genes chr3R_5_15755001 chr3R_15755001 RAL-383 2126 chr3R 15779638 15779669 chr3R 15779739 15779770 10 101 5.0 4.0 4.5 1.8 132 chr3R 15779638 intergenic CG5614 + chr3R 15779704 intergenic CG5614 + chr3R 15779770 intergenic CG5614 + chr3R_10_15775001 chr3R_15775001 RAL-383 2127 chr3R 15811489 15811532 chr3R 15811739 15811793 14 253 3.0 3.0 3.0 3.5 304 chr3R 15811489 intron alpha-Man-IIb + chr3R 15811641 intron alpha-Man-IIb + chr3R 15811793 intron,3` UTR alpha-Man-IIb +,CR45211 - chr3R_14_15810001 chr3R_15810001 RAL-383 2128 chr3R 16021211 16021231 chr3R 16021279 16021319 5 67 2.0 2.5 2.2 1.6 108 chr3R 16021211 intergenic not near genes chr3R 16021265 intergenic not near genes chr3R 16021319 intergenic not near genes chr3R_5_16020001 chr3R_16020001 RAL-383 2129 chr3R 16023849 16023887 chr3R 16023946 16023969 8 95 0.5 3.5 2.0 2.7 120 chr3R 16023849 intergenic not near genes chr3R 16023909 intergenic not near genes chr3R 16023969 intergenic not near genes chr3R_8_16020001 chr3R_16020001 RAL-383 2130 chr3R 16033407 16033419 chr3R 16033508 16033520 5 101 3.5 5.0 4.2 1.0 113 chr3R 16033407 intron pnr + chr3R 16033464 intron pnr + chr3R 16033520 intron pnr + chr3R_5_16030001 chr3R_16030001 RAL-383 2131 chr3R 16154530 16154571 chr3R 16154638 16154679 12 108 2.0 1.5 1.8 4.3 149 chr3R 16154530 intergenic CG6006 + chr3R 16154604 intergenic CG6006 + chr3R 16154679 intergenic CG6006 + chr3R_12_16150001 chr3R_16150001 RAL-383 2132 chr3R 16189390 16189433 chr3R 16189812 16189856 invader4 14 422 5.5 3.0 4.2 2.7 466 chr3R 16189390 intron sra + chr3R 16189623 intron sra + chr3R 16189856 intron sra + chr3R_14_16185001 chr3R_16185001 RAL-383 2133 chr3R 16368439 16368472 chr3R 16368538 16368570 11 97 0.5 5.5 3.0 2.8 131 chr3R 16368439 intergenic CG14880 -,CG10317 - chr3R 16368504 intergenic CG14880 -,CG10317 - chr3R 16368570 intergenic CG14880 -,CG10317 - chr3R_11_16365001 chr3R_16365001 RAL-383 2134 chr3R 16582901 16582912 chr3R 16583000 16583011 4 99 2.0 3.5 2.8 1.1 110 chr3R 16582901 intron Scp2 - chr3R 16582956 intron Scp2 - chr3R 16583011 intron Scp2 - chr3R_4_16580001 chr3R_16580001 RAL-383 2135 chr3R 16633676 16633683 chr3R 16633796 16633803 4 120 8.5 10.5 9.5 0.4 127 chr3R 16633676 intron Fas1 + chr3R 16633740 intron Fas1 + chr3R 16633803 intron Fas1 + chr3R_4_16630001 chr3R_16630001 RAL-383 2136 chr3R 16702334 16702374 chr3R 16702489 16702529 5 153 0.5 3.0 1.8 1.8 195 chr3R 16702334 intron Ubx - chr3R 16702432 intron Ubx - chr3R 16702529 intron Ubx - chr3R_5_16700001 chr3R_16700001 RAL-383 2137 chr3R 16734864 16734878 chr3R 16734966 16734981 8 103 0.0 5.5 2.8 2.1 117 chr3R 16734864 intergenic Ubx - chr3R 16734922 intergenic Ubx - chr3R 16734981 intergenic not near genes chr3R_8_16730001 chr3R_16730001 RAL-383 2138 chr3R 16756306 16756349 chr3R 16762517 16762543 diver 10 6207 1.5 1.5 1.5 4.0 6237 chr3R 16756306 intron bxd - chr3R 16759424 intron bxd - chr3R 16762543 intron bxd - chr3R_10_16755001 chr3R_16755001 RAL-383 2139 chr3R 16849711 16849744 chr3R 16849819 16849861 7 112 4.0 3.5 3.8 1.5 150 chr3R 16849711 intron iab-8 - chr3R 16849786 intron iab-8 - chr3R 16849861 intron iab-8 - chr3R_7_16845001 chr3R_16845001 RAL-383 2140 chr3R 16860325 16860356 chr3R 16860423 16860454 8 98 2.5 0.0 1.2 3.6 129 chr3R 16860325 intron iab-8 - chr3R 16860390 intron iab-8 - chr3R 16860454 intron iab-8 - chr3R_8_16860001 chr3R_16860001 RAL-383 2141 chr3R 16885468 16885511 chr3R 16885627 16885674 10 159 2.5 1.0 1.8 3.6 206 chr3R 16885468 intron iab-8 - chr3R 16885571 intron iab-8 - chr3R 16885674 intron iab-8 - chr3R_10_16885001 chr3R_16885001 RAL-383 2142 chr3R 17184717 17184753 chr3R 17184813 17184849 7 96 5.0 2.5 3.8 1.5 132 chr3R 17184717 intron Mur89F - chr3R 17184783 intron Mur89F - chr3R 17184849 intron Mur89F - chr3R_7_17180001 chr3R_17180001 RAL-383 2143 chr3R 17194395 17194431 chr3R 17194489 17194530 5 95 0.0 3.0 1.5 2.0 135 chr3R 17194395 intron Mur89F - chr3R 17194462 intron Mur89F - chr3R 17194530 intron Mur89F - chr3R_5_17190001 chr3R_17190001 RAL-383 2144 chr3R 17209684 17209695 chr3R 17209792 17209798 6 107 3.5 8.0 5.8 0.9 114 chr3R 17209684 intergenic not near genes chr3R 17209741 intergenic not near genes chr3R 17209798 intergenic not near genes chr3R_6_17205001 chr3R_17205001 RAL-383 2145 chr3R 17268653 17268692 chr3R 17268795 17268834 12 142 6.0 3.5 4.8 2.1 181 chr3R 17268653 intergenic not near genes chr3R 17268744 intergenic not near genes chr3R 17268834 intergenic not near genes chr3R_12_17265001 chr3R_17265001 RAL-383 2146 chr3R 17317568 17317612 chr3R 17317668 17317712 11 98 3.5 7.0 5.2 1.8 144 chr3R 17317568 intergenic not near genes chr3R 17317640 intergenic not near genes chr3R 17317712 intergenic not near genes chr3R_11_17315001 chr3R_17315001 RAL-383 2147 chr3R 17335156 17335182 chr3R 17335238 17335242 6 84 3.0 4.5 3.8 1.2 86 chr3R 17335156 intron beat-IIa - chr3R 17335199 intron beat-IIa - chr3R 17335242 intron beat-IIa - chr3R_6_17335001 chr3R_17335001 RAL-383 2148 chr3R 17346674 17346716 chr3R 17348257 17348299 F-element 15 1583 2.5 6.5 4.5 2.7 1625 chr3R 17346674 intron beat-IIa - chr3R 17347486 intron beat-IIa - chr3R 17348299 intron beat-IIa - chr3R_15_17345001 chr3R_17345001 RAL-383 2149 chr3R 17452526 17452580 chr3R 17452746 17452798 22 218 3.0 4.0 3.5 4.9 272 chr3R 17452526 intergenic not near genes chr3R 17452662 intergenic not near genes chr3R 17452798 intergenic not near genes chr3R_22_17450001 chr3R_17450001 RAL-383 2150 chr3R 17467595 17467616 chr3R 17467726 17467747 12 130 3.5 6.5 5.0 2.0 152 chr3R 17467595 intergenic not near genes chr3R 17467671 intergenic not near genes chr3R 17467747 intergenic not near genes chr3R_12_17465001 chr3R_17465001 RAL-383 2151 chr3R 17497943 17497993 chr3R 17498049 17498099 16 106 2.0 4.0 3.0 4.0 156 chr3R 17497943 intron Dscam3 - chr3R 17498021 intron Dscam3 - chr3R 17498099 intron Dscam3 - chr3R_16_17495001 chr3R_17495001 RAL-383 2152 chr3R 17507428 17507472 chr3R 17507526 17507570 15 98 2.0 3.0 2.5 4.3 142 chr3R 17507428 intergenic not near genes chr3R 17507499 intergenic not near genes chr3R 17507570 intergenic not near genes chr3R_15_17505001 chr3R_17505001 RAL-383 2153 chr3R 17550818 17550866 chr3R 17551014 17551040 12 187 2.0 7.5 4.8 2.1 222 chr3R 17550818 intergenic not near genes chr3R 17550929 intergenic not near genes chr3R 17551040 intergenic not near genes chr3R_12_17550001 chr3R_17550001 RAL-383 2154 chr3R 17584836 17584876 chr3R 17585028 17585068 7 192 3.5 2.5 3.0 1.8 232 chr3R 17584836 intergenic not near genes chr3R 17584952 intergenic not near genes chr3R 17585068 intergenic not near genes chr3R_7_17580001 chr3R_17580001 RAL-383 2155 chr3R 17591286 17591321 chr3R 17591722 17591767 F-element 7 443 4.5 3.0 3.8 1.5 481 chr3R 17591286 intergenic not near genes chr3R 17591526 intergenic not near genes chr3R 17591767 intergenic not near genes chr3R_7_17590001 chr3R_17590001 RAL-383 2156 chr3R 17624953 17624970 chr3R 17625049 17625066 9 96 3.5 2.0 2.8 2.4 113 chr3R 17624953 intergenic AttD + chr3R 17625010 intergenic AttD + chr3R 17625066 intergenic AttD + chr3R_9_17625001 chr3R_17625001 RAL-383 2157 chr3R 17638304 17638347 chr3R 17638806 17638853 roo 13 506 4.0 8.5 6.2 1.8 549 chr3R 17638304 intron CG43175 + chr3R 17638578 intron CG43175 + chr3R 17638853 intron,intron CG43175 +,CR45222 + chr3R_13_17635001 chr3R_17635001 RAL-383 2158 chr3R 17647224 17647274 chr3R 17647341 17647391 13 114 2.0 1.5 1.8 4.6 167 chr3R 17647224 intergenic CG14322 + chr3R 17647308 intergenic CG14322 + chr3R 17647391 intergenic CG14322 + chr3R_13_17645001 chr3R_17645001 RAL-383 2159 chr3R 17655437 17655481 chr3R 17655552 17655596 6 115 2.0 4.0 3.0 1.5 159 chr3R 17655437 intron CG14322 + chr3R 17655516 intron CG14322 + chr3R 17655596 intron CG14322 + chr3R_6_17655001 chr3R_17655001 RAL-383 2160 chr3R 17702557 17702586 chr3R 17702678 17702721 11 134 3.0 4.5 3.8 2.3 164 chr3R 17702557 intron osa - chr3R 17702639 intron osa - chr3R 17702721 intron osa - chr3R_11_17700001 chr3R_17700001 RAL-383 2161 chr3R 17725056 17725073 chr3R 17725170 17725187 4 114 3.0 0.0 1.5 1.6 131 chr3R 17725056 intergenic Atg8b - chr3R 17725122 intergenic Atg8b - chr3R 17725187 intergenic Atg8b - chr3R_4_17725001 chr3R_17725001 RAL-383 2162 chr3R 17823145 17823192 chr3R 17823316 17823363 6 171 3.5 2.5 3.0 1.5 218 chr3R 17823145 intron tinc + chr3R 17823254 intron tinc + chr3R 17823363 intron tinc + chr3R_6_17820001 chr3R_17820001 RAL-383 2163 chr3R 17858039 17858083 chr3R 17858151 17858195 10 110 3.5 4.5 4.0 2.0 156 chr3R 17858039 intron tinc + chr3R 17858117 intron tinc + chr3R 17858195 intron tinc + chr3R_10_17855001 chr3R_17855001 RAL-383 2164 chr3R 17899070 17899086 chr3R 17899168 17899184 7 98 4.5 5.0 4.8 1.2 114 chr3R 17899070 intron Rim - chr3R 17899127 intron Rim - chr3R 17899184 intron Rim - chr3R_7_17895001 chr3R_17895001 RAL-383 2165 chr3R 17925843 17925868 chr3R 17927330 17927355 hobo 5 1487 2.0 6.0 4.0 1.0 1512 chr3R 17925843 intron cpo + chr3R 17926599 intron cpo + chr3R 17927355 intron cpo + chr3R_5_17925001 chr3R_17925001 RAL-383 2166 chr3R 17925869 17925882 chr3R 17927317 17927353 hobo 4 1473 1.5 4.5 3.0 1.0 1484 chr3R 17925869 intron cpo + chr3R 17926611 intron cpo + chr3R 17927353 intron cpo + chr3R_4_17925001 chr3R_17925001 RAL-383 2167 chr3R 18003021 18003038 chr3R 18003137 18003154 6 116 7.0 0.0 3.5 1.3 133 chr3R 18003021 intron cpo + chr3R 18003088 intron cpo + chr3R 18003154 intron cpo + chr3R_6_18000001 chr3R_18000001 RAL-383 2168 chr3R 18041740 18041775 chr3R 18041836 18041862 7 95 0.0 0.0 0.0 7.0 122 chr3R 18041740 intergenic not near genes chr3R 18041801 intergenic not near genes chr3R 18041862 intergenic not near genes chr3R_7_18040001 chr3R_18040001 RAL-383 2169 chr3R 18061571 18061608 chr3R 18063159 18063196 F-element 18 1588 4.5 6.5 5.5 2.8 1625 chr3R 18061571 intergenic not near genes chr3R 18062384 intergenic not near genes chr3R 18063196 intergenic not near genes chr3R_18_18060001 chr3R_18060001 RAL-383 2170 chr3R 18067967 18068023 chr3R 18068083 18068125 5 105 0.0 5.0 2.5 1.4 158 chr3R 18067967 intergenic not near genes chr3R 18068046 intergenic not near genes chr3R 18068125 intergenic not near genes chr3R_5_18065001 chr3R_18065001 RAL-383 2171 chr3R 18114717 18114756 chr3R 18114917 18114920 10 192 2.5 4.5 3.5 2.2 203 chr3R 18114717 intron sr + chr3R 18114818 intron sr + chr3R 18114920 intron sr + chr3R_10_18110001 chr3R_18110001 RAL-383 2172 chr3R 18122878 18122917 chr3R 18122975 18123014 6 97 2.0 4.5 3.2 1.4 136 chr3R 18122878 intron sr + chr3R 18122946 intron sr + chr3R 18123014 intron sr + chr3R_6_18120001 chr3R_18120001 RAL-383 2173 chr3R 18136214 18136247 chr3R 18136348 18136381 9 134 2.5 3.0 2.8 2.4 167 chr3R 18136214 intergenic not near genes chr3R 18136298 intergenic not near genes chr3R 18136381 intergenic not near genes chr3R_9_18135001 chr3R_18135001 RAL-383 2174 chr3R 18201378 18201426 chr3R 18201493 18201545 23 117 4.5 2.5 3.5 5.1 167 chr3R 18201378 intron CG7985 + chr3R 18201462 intron CG7985 + chr3R 18201545 intron CG7985 + chr3R_23_18200001 chr3R_18200001 RAL-383 2175 chr3R 18208526 18208547 chr3R 18208631 18208652 5 105 2.0 3.0 2.5 1.4 126 chr3R 18208526 intron CG7985 + chr3R 18208589 intron CG7985 + chr3R 18208652 intron CG7985 + chr3R_5_18205001 chr3R_18205001 RAL-383 2176 chr3R 18232800 18232808 chr3R 18232899 18232907 4 99 2.5 5.5 4.0 0.8 107 chr3R 18232800 intergenic not near genes chr3R 18232854 intergenic not near genes chr3R 18232907 intergenic not near genes chr3R_4_18230001 chr3R_18230001 RAL-383 2177 chr3R 18410044 18410059 chr3R 18410154 18410169 7 110 5.5 4.5 5.0 1.2 125 chr3R 18410044 intron CG31122 - chr3R 18410106 intron,3` UTR CG31122 -,CG10864 - chr3R 18410169 intron,3` UTR CG31122 -,CG10864 - chr3R_7_18410001 chr3R_18410001 RAL-383 2178 chr3R 18464294 18464341 chr3R 18464452 18464500 6 158 0.0 3.0 1.5 2.4 206 chr3R 18464294 intron fru - chr3R 18464397 intron fru - chr3R 18464500 intron fru - chr3R_6_18460001 chr3R_18460001 RAL-383 2179 chr3R 18501580 18501624 chr3R 18501676 18501725 15 99 6.5 7.0 6.8 1.9 145 chr3R 18501580 intron fru - chr3R 18501652 intron fru - chr3R 18501725 intron fru - chr3R_15_18500001 chr3R_18500001 RAL-383 2180 chr3R 18575559 18575604 chr3R 18575663 18575676 13 98 2.0 7.5 4.8 2.2 117 chr3R 18575559 intron,intron CG7694 +,fray + chr3R 18575618 intron,intron CG7694 +,fray + chr3R 18575676 intron,intron CG7694 +,fray + chr3R_13_18575001 chr3R_18575001 RAL-383 2181 chr3R 18606486 18606533 chr3R 18610738 18610785 F-element 20 4252 4.0 4.0 4.0 4.0 4299 chr3R 18606486 intron,intron qin +,CG14304 - chr3R 18608636 intron,intron qin +,CG14304 - chr3R 18610785 intron,intron qin +,CG14304 - chr3R_20_18605001 chr3R_18605001 RAL-383 2182 chr3R 18617696 18617746 chr3R 18617796 18617846 4 98 0.5 2.5 1.5 1.6 150 chr3R 18617696 intron,intron qin +,CG14304 - chr3R 18617771 intron,intron qin +,CG14304 - chr3R 18617846 intron,intron qin +,CG14304 - chr3R_4_18615001 chr3R_18615001 RAL-383 2183 chr3R 18704483 18704532 chr3R 18704580 18704629 14 92 1.5 4.0 2.8 3.7 146 chr3R 18704483 intergenic not near genes chr3R 18704556 intergenic not near genes chr3R 18704629 intergenic not near genes chr3R_14_18700001 chr3R_18700001 RAL-383 2184 chr3R 18716879 18716927 chr3R 18717049 18717097 14 170 1.0 4.0 2.5 4.0 218 chr3R 18716879 intron,3` UTR Cha +,VAChT + chr3R 18716988 intron,3` UTR Cha +,VAChT + chr3R 18717097 intron,3` UTR Cha +,VAChT + chr3R_14_18715001 chr3R_18715001 RAL-383 2185 chr3R 18730017 18730030 chr3R 18730102 18730126 4 93 3.0 2.0 2.5 1.1 109 chr3R 18730017 intron Cha + chr3R 18730072 intron Cha + chr3R 18730126 exon Cha + chr3R_4_18730001 chr3R_18730001 RAL-383 2186 chr3R 18781677 18781724 chr3R 18781770 18781820 8 94 1.0 2.5 1.8 2.9 143 chr3R 18781677 intron CG7720 - chr3R 18781748 intron CG7720 - chr3R 18781820 intron CG7720 - chr3R_8_18780001 chr3R_18780001 RAL-383 2187 chr3R 18785849 18785902 chr3R 18785946 18785999 14 96 1.5 1.5 1.5 5.6 150 chr3R 18785849 intron CG7720 - chr3R 18785924 intron CG7720 - chr3R 18785999 intron CG7720 - chr3R_14_18785001 chr3R_18785001 RAL-383 2188 chr3R 18792817 18792832 chr3R 18792886 18792935 5 96 2.0 0.0 1.0 2.5 118 chr3R 18792817 intron CG7720 - chr3R 18792876 intron CG7720 - chr3R 18792935 intron CG7720 - chr3R_5_18790001 chr3R_18790001 RAL-383 2189 chr3R 18807309 18807334 chr3R 18807406 18807431 13 96 1.0 0.0 0.5 8.7 122 chr3R 18807309 intron CG18208 - chr3R 18807370 intron CG18208 - chr3R 18807431 intron CG18208 - chr3R_13_18805001 chr3R_18805001 RAL-383 2190 chr3R 18808490 18808508 chr3R 18808552 18808605 4 76 2.0 2.0 2.0 1.3 115 chr3R 18808490 intron CG18208 - chr3R 18808548 intron CG18208 - chr3R 18808605 intron CG18208 - chr3R_4_18805001 chr3R_18805001 RAL-383 2191 chr3R 18812071 18812109 chr3R 18812158 18812197 15 89 6.0 3.0 4.5 2.7 126 chr3R 18812071 intron CG18208 - chr3R 18812134 intron CG18208 - chr3R 18812197 intron CG18208 - chr3R_15_18810001 chr3R_18810001 RAL-383 2192 chr3R 18887583 18887595 chr3R 18887684 18887696 8 101 6.5 8.0 7.2 1.0 113 chr3R 18887583 intergenic not near genes chr3R 18887640 intergenic not near genes chr3R 18887696 intergenic not near genes chr3R_8_18885001 chr3R_18885001 RAL-383 2193 chr3R 18936181 18936184 chr3R 18936264 18936286 4 98 1.0 7.5 4.2 0.8 105 chr3R 18936181 intron CG42613 + chr3R 18936234 intron CG42613 + chr3R 18936286 intron CG42613 + chr3R_4_18935001 chr3R_18935001 RAL-383 2194 chr3R 19013005 19013051 chr3R 19013109 19013155 18 102 1.5 1.0 1.2 8.2 150 chr3R 19013005 intron gukh + chr3R 19013080 intron gukh + chr3R 19013155 intron gukh + chr3R_18_19010001 chr3R_19010001 RAL-383 2195 chr3R 19077658 19077687 chr3R 19077795 19077799 8 130 7.0 2.0 4.5 1.5 141 chr3R 19077658 intron cdi - chr3R 19077728 intron cdi - chr3R 19077799 intron cdi - chr3R_8_19075001 chr3R_19075001 RAL-383 2196 chr3R 19136409 19136443 chr3R 19139779 19139809 Bari1 6 3376 47.5 30.0 38.8 0.2 3400 chr3R 19136409 exon Cyp12a4 + chr3R 19138109 intergenic not near genes chr3R 19139809 3` UTR Ppcs - chr3R_6_19135001 chr3R_19135001 RAL-383 2197 chr3R 19140254 19140295 chr3R 19140713 19140763 10 455 2.0 1.0 1.5 4.0 509 chr3R 19140254 3` UTR Ppcs - chr3R 19140508 3` UTR Ppcs - chr3R 19140763 3` UTR Ppcs - chr3R_10_19140001 chr3R_19140001 RAL-383 2198 chr3R 19340378 19340429 chr3R 19340475 19340526 13 95 2.0 2.0 2.0 4.3 148 chr3R 19340378 intergenic not near genes chr3R 19340452 intergenic not near genes chr3R 19340526 intergenic not near genes chr3R_13_19340001 chr3R_19340001 RAL-383 2199 chr3R 19364421 19364446 chr3R 19364589 19364610 7 165 2.5 3.5 3.0 1.8 189 chr3R 19364421 intergenic not near genes chr3R 19364516 intergenic not near genes chr3R 19364610 intergenic not near genes chr3R_7_19360001 chr3R_19360001 RAL-383 2200 chr3R 19417535 19417557 chr3R 19417643 19417675 4 113 0.0 2.0 1.0 2.0 140 chr3R 19417535 intron CG31221 + chr3R 19417605 intron CG31221 + chr3R 19417675 intron CG31221 + chr3R_4_19415001 chr3R_19415001 RAL-383 2201 chr3R 19570290 19570338 chr3R 19570386 19570434 20 94 4.0 4.5 4.2 3.8 144 chr3R 19570290 intron Dys + chr3R 19570362 intron Dys + chr3R 19570434 intron Dys + chr3R_20_19570001 chr3R_19570001 RAL-383 2202 chr3R 19593484 19593514 chr3R 19593589 19593613 6 99 7.0 2.0 4.5 1.1 129 chr3R 19593484 intron Dys + chr3R 19593548 intron Dys + chr3R 19593613 intron Dys + chr3R_6_19590001 chr3R_19590001 RAL-383 2203 chr3R 19604661 19604698 chr3R 19604814 19604851 17 152 7.5 4.0 5.8 2.5 190 chr3R 19604661 exon CG7342 + chr3R 19604756 intron CG7342 + chr3R 19604851 intron CG7342 + chr3R_17_19600001 chr3R_19600001 RAL-383 2204 chr3R 19611994 19612009 chr3R 19616007 19616034 12 4016 23.5 29.5 26.5 0.4 4040 chr3R 19611994 exon CG17752 + chr3R 19614014 exon CG16727 + chr3R 19616034 3` UTR CG6231 - chr3R_12_19610001 chr3R_19610001 RAL-383 2205 chr3R 19716223 19716235 chr3R 19716300 19716332 4 92 0.0 0.5 0.2 3.3 109 chr3R 19716223 intergenic CG34286 - chr3R 19716278 intergenic CG34286 - chr3R 19716332 intergenic CG34286 - chr3R_4_19715001 chr3R_19715001 RAL-383 2206 chr3R 19953930 19953976 chr3R 19954026 19954032 7 85 4.5 4.5 4.5 1.3 102 chr3R 19953930 intron Hs6st - chr3R 19953981 intron Hs6st - chr3R 19954032 intron Hs6st - chr3R_7_19950001 chr3R_19950001 RAL-383 2207 chr3R 20087124 20087137 chr3R 20087238 20087251 6 114 5.5 0.0 2.8 1.6 127 chr3R 20087124 intergenic not near genes chr3R 20087188 intergenic not near genes chr3R 20087251 intergenic not near genes chr3R_6_20085001 chr3R_20085001 RAL-383 2208 chr3R 20109516 20109569 chr3R 20114742 20114769 copia 14 5224 4.5 3.5 4.0 2.8 5253 chr3R 20109516 intergenic not near genes chr3R 20112142 intergenic not near genes chr3R 20114769 intergenic CG10887 + chr3R_14_20110001 chr3R_20110001 RAL-383 2209 chr3R 20156676 20156718 chr3R 20165866 20165908 roo 14 9186 3.0 5.0 4.0 2.8 9232 chr3R 20156676 intergenic not near genes chr3R 20161292 intergenic not near genes chr3R 20165908 intergenic not near genes chr3R_14_20160001 chr3R_20160001 RAL-383 2210 chr3R 20197785 20197809 chr3R 20197875 20197910 6 94 2.5 5.5 4.0 1.2 125 chr3R 20197785 intergenic not near genes chr3R 20197848 intergenic not near genes chr3R 20197910 intergenic not near genes chr3R_6_20195001 chr3R_20195001 RAL-383 2211 chr3R 20205550 20205596 chr3R 20205692 20205738 9 141 3.5 4.5 4.0 1.8 188 chr3R 20205550 intron Nlg4 + chr3R 20205644 intron Nlg4 + chr3R 20205738 intron Nlg4 + chr3R_9_20205001 chr3R_20205001 RAL-383 2212 chr3R 20228682 20228727 chr3R 20228781 20228826 17 100 36.0 35.0 35.5 0.5 144 chr3R 20228682 intron Nlg4 + chr3R 20228754 intron Nlg4 + chr3R 20228826 intron Nlg4 + chr3R_17_20225001 chr3R_20225001 RAL-383 2213 chr3R 20245264 20245299 chr3R 20248895 20248930 F-element 8 3631 4.5 1.0 2.8 2.1 3666 chr3R 20245264 3` UTR Nlg4 + chr3R 20247097 intergenic not near genes chr3R 20248930 intergenic not near genes chr3R_8_20245001 chr3R_20245001 RAL-383 2214 chr3R 20256846 20256867 chr3R 20256944 20256965 13 98 0.5 6.5 3.5 2.9 119 chr3R 20256846 intron cic + chr3R 20256906 intron cic + chr3R 20256965 intron cic + chr3R_13_20255001 chr3R_20255001 RAL-383 2215 chr3R 20266504 20266545 chr3R 20272995 20273036 Burdock 15 6490 1.0 6.0 3.5 3.3 6532 chr3R 20266504 intron cic + chr3R 20269770 intron cic + chr3R 20273036 intron cic + chr3R_15_20265001 chr3R_20265001 RAL-383 2216 chr3R 20330983 20330988 chr3R 20331489 20331494 roo 4 506 10.5 6.0 8.2 0.4 511 chr3R 20330983 intergenic Sirt2 + chr3R 20331238 intergenic Sirt2 + chr3R 20331494 intergenic not near genes chr3R_4_20330001 chr3R_20330001 RAL-383 2217 chr3R 20330991 20331025 chr3R 20331482 20331531 roo 11 503 5.5 5.5 5.5 1.7 540 chr3R 20330991 intergenic Sirt2 + chr3R 20331261 intergenic Sirt2 + chr3R 20331531 intergenic not near genes chr3R_11_20330001 chr3R_20330001 RAL-383 2218 chr3R 20389457 20389504 chr3R 20389557 20389603 13 102 1.5 3.5 2.5 3.7 146 chr3R 20389457 intron Gfrl - chr3R 20389530 intron Gfrl - chr3R 20389603 intron Gfrl - chr3R_13_20385001 chr3R_20385001 RAL-383 2219 chr3R 20433083 20433129 chr3R 20433193 20433239 13 109 4.5 5.0 4.8 2.2 156 chr3R 20433083 intron Gfrl - chr3R 20433161 intron Gfrl - chr3R 20433239 intron Gfrl - chr3R_13_20430001 chr3R_20430001 RAL-383 2220 chr3R 20467093 20467094 chr3R 20467168 20467190 5 84 5.0 2.5 3.8 1.0 97 chr3R 20467093 intron Gfrl - chr3R 20467142 intron Gfrl - chr3R 20467190 intron Gfrl - chr3R_5_20465001 chr3R_20465001 RAL-383 2221 chr3R 20469288 20469476 chr3R 20469406 20469579 12 106 0.0 0.0 0.0 12.0 291 chr3R 20469288 intron Gfrl - chr3R 20469434 intron Gfrl - chr3R 20469579 intron Gfrl - chr3R_12_20465001 chr3R_20465001 RAL-383 2222 chr3R 20506570 20506610 chr3R 20507393 20507433 BS 11 821 2.5 7.0 4.8 1.9 863 chr3R 20506570 intergenic Or92a + chr3R 20507002 intergenic CG4288 - chr3R 20507433 3` UTR CG4288 - chr3R_11_20505001 chr3R_20505001 RAL-383 2223 chr3R 20512985 20513029 chr3R 20515708 20515752 opus 12 2721 8.0 1.5 4.8 2.1 2767 chr3R 20512985 intergenic not near genes chr3R 20514368 intergenic not near genes chr3R 20515752 intergenic not near genes chr3R_12_20510001 chr3R_20510001 RAL-383 2224 chr3R 20553445 20553482 chr3R 20553554 20553590 4 109 0.0 1.0 0.5 2.7 145 chr3R 20553445 intron,intron att-ORFA -,att-ORFB - chr3R 20553518 intron,intron att-ORFA -,att-ORFB - chr3R 20553590 exon,exon att-ORFA -,att-ORFB - chr3R_4_20550001 chr3R_20550001 RAL-383 2225 chr3R 20585924 20585962 chr3R 20586029 20586036 9 102 0.0 0.5 0.2 7.5 112 chr3R 20585924 intergenic CG16953 -,Sep2 - chr3R 20585980 intergenic CG16953 -,Sep2 - chr3R 20586036 intergenic Sep2 -,CG16953 - chr3R_9_20585001 chr3R_20585001 RAL-383 2226 chr3R 20594461 20594512 chr3R 20594571 20594622 12 110 2.5 0.5 1.5 4.8 161 chr3R 20594461 intron bon + chr3R 20594542 intron bon + chr3R 20594622 intron bon + chr3R_12_20590001 chr3R_20590001 RAL-383 2227 chr3R 20664235 20664251 chr3R 20664393 20664410 4 157 2.5 6.5 4.5 0.7 175 chr3R 20664235 intergenic not near genes chr3R 20664322 intergenic not near genes chr3R 20664410 intergenic not near genes chr3R_4_20660001 chr3R_20660001 RAL-383 2228 chr3R 20730908 20731058 chr3R 20731028 20731166 15 114 0.0 0.0 0.0 15.0 258 chr3R 20730908 intergenic not near genes chr3R 20731037 intergenic not near genes chr3R 20731166 intergenic CG31205 + chr3R_15_20730001 chr3R_20730001 RAL-383 2229 chr3R 20771703 20771727 chr3R 20771804 20771828 9 99 0.0 8.0 4.0 1.8 125 chr3R 20771703 intron,intron Syp +,Takl1 - chr3R 20771766 intron,intron Syp +,Takl1 - chr3R 20771828 intron,exon Syp +,Takl1 - chr3R_9_20770001 chr3R_20770001 RAL-383 2230 chr3R 20847754 20847805 chr3R 20848011 20848060 16 257 4.0 3.5 3.8 3.3 306 chr3R 20847754 intergenic CG15696 + chr3R 20847907 intergenic CG15696 + chr3R 20848060 intergenic CG15696 + chr3R_16_20845001 chr3R_20845001 RAL-383 2231 chr3R 20850068 20850108 chr3R 20850173 20850213 10 104 1.5 1.5 1.5 4.0 145 chr3R 20850068 intergenic RpS30 + chr3R 20850140 intergenic RpS30 + chr3R 20850213 intergenic RpS30 + chr3R_10_20850001 chr3R_20850001 RAL-383 2232 chr3R 20867749 20867800 chr3R 20867857 20867908 16 103 5.0 2.0 3.5 3.6 159 chr3R 20867749 intergenic not near genes chr3R 20867828 intergenic not near genes chr3R 20867908 intergenic not near genes chr3R_16_20865001 chr3R_20865001 RAL-383 2233 chr3R 20870242 20870284 chr3R 20870345 20870389 7 103 2.5 2.5 2.5 2.0 147 chr3R 20870242 intergenic not near genes chr3R 20870316 intergenic not near genes chr3R 20870389 intergenic not near genes chr3R_7_20870001 chr3R_20870001 RAL-383 2234 chr3R 21048376 21048428 chr3R 21051415 21051449 7 3026 26.0 24.0 25.0 0.3 3073 chr3R 21048376 exon CG7079 - chr3R 21049912 intergenic CG17279 - chr3R 21051449 3` UTR Mvl - chr3R_7_21045001 chr3R_21045001 RAL-383 2235 chr3R 21108023 21108058 chr3R 21108304 21108339 7 280 2.5 1.5 2.0 2.3 316 chr3R 21108023 intergenic Sec15 -,rtet + chr3R 21108181 intergenic Sec15 -,rtet + chr3R 21108339 intergenic rtet +,Sec15 - chr3R_7_21105001 chr3R_21105001 RAL-383 2236 chr3R 21154532 21154570 chr3R 21154757 21154805 7 233 6.0 0.0 3.0 1.8 273 chr3R 21154532 intron SNF4Agamma + chr3R 21154668 intron SNF4Agamma + chr3R 21154805 intron SNF4Agamma + chr3R_7_21150001 chr3R_21150001 RAL-383 2237 chr3R 21163257 21163273 chr3R 21163332 21163371 5 89 5.5 3.5 4.5 0.9 114 chr3R 21163257 intron SNF4Agamma + chr3R 21163314 intron SNF4Agamma + chr3R 21163371 intron SNF4Agamma + chr3R_5_21160001 chr3R_21160001 RAL-383 2238 chr3R 21188041 21188086 chr3R 21188171 21188215 7 129 0.0 0.0 0.0 7.0 174 chr3R 21188041 intron SNF4Agamma + chr3R 21188128 intron SNF4Agamma + chr3R 21188215 intron SNF4Agamma + chr3R_7_21185001 chr3R_21185001 RAL-383 2239 chr3R 21214733 21214750 chr3R 21214925 21214942 5 190 4.0 5.0 4.5 0.9 209 chr3R 21214733 intergenic CG5862 + chr3R 21214838 intergenic CG5862 + chr3R 21214942 intergenic CG5862 + chr3R_5_21210001 chr3R_21210001 RAL-383 2240 chr3R 21239789 21239957 chr3R 21239903 21240047 9 97 0.5 0.0 0.2 7.5 258 chr3R 21239789 intergenic not near genes chr3R 21239918 intergenic not near genes chr3R 21240047 intergenic not near genes chr3R_9_21235001 chr3R_21235001 RAL-383 2241 chr3R 21330781 21330831 chr3R 21330890 21330941 24 106 2.0 7.5 4.8 4.1 160 chr3R 21330781 intron CG16791 - chr3R 21330861 intron CG16791 - chr3R 21330941 intron CG16791 - chr3R_24_21330001 chr3R_21330001 RAL-383 2242 chr3R 21383266 21383275 chr3R 21383366 21383375 9 100 0.0 1.5 0.8 5.0 109 chr3R 21383266 intergenic not near genes chr3R 21383320 intergenic not near genes chr3R 21383375 intergenic not near genes chr3R_9_21380001 chr3R_21380001 RAL-383 2243 chr3R 21385671 21385958 chr3R 21385773 21386016 20 91 3.5 0.0 1.8 7.1 345 chr3R 21385671 intergenic not near genes chr3R 21385844 intergenic not near genes chr3R 21386016 intergenic not near genes chr3R_20_21385001 chr3R_21385001 RAL-383 2244 chr3R 21472019 21472035 chr3R 21472109 21472136 10 99 2.0 8.5 5.2 1.6 117 chr3R 21472019 intergenic not near genes chr3R 21472078 intergenic not near genes chr3R 21472136 intergenic not near genes chr3R_10_21470001 chr3R_21470001 RAL-383 2245 chr3R 21506860 21506914 chr3R 21506962 21507014 17 103 1.0 2.5 1.8 6.1 154 chr3R 21506860 intron C15 + chr3R 21506937 intron C15 + chr3R 21507014 intron C15 + chr3R_17_21505001 chr3R_21505001 RAL-383 2246 chr3R 21519969 21520133 chr3R 21520090 21520247 18 117 0.5 0.5 0.5 12.0 278 chr3R 21519969 intergenic not near genes chr3R 21520108 intergenic not near genes chr3R 21520247 intergenic not near genes chr3R_18_21520001 chr3R_21520001 RAL-383 2247 chr3R 21651219 21651269 chr3R 21651317 21651367 15 98 6.5 5.5 6.0 2.1 148 chr3R 21651219 intron E2f - chr3R 21651293 intron E2f - chr3R 21651367 intron E2f - chr3R_15_21650001 chr3R_21650001 RAL-383 2248 chr3R 21725666 21725686 chr3R 21725822 21725842 4 156 0.0 4.5 2.2 1.2 176 chr3R 21725666 intergenic not near genes chr3R 21725754 intergenic not near genes chr3R 21725842 intergenic not near genes chr3R_4_21725001 chr3R_21725001 RAL-383 2249 chr3R 21731780 21731836 chr3R 21731908 21731963 11 127 3.5 0.0 1.8 3.9 183 chr3R 21731780 intergenic not near genes chr3R 21731872 intergenic not near genes chr3R 21731963 intergenic not near genes chr3R_11_21730001 chr3R_21730001 RAL-383 2250 chr3R 21733985 21734000 chr3R 21734117 21734132 9 131 7.5 3.5 5.5 1.4 147 chr3R 21733985 intergenic not near genes chr3R 21734058 intergenic not near genes chr3R 21734132 intergenic not near genes chr3R_9_21730001 chr3R_21730001 RAL-383 2251 chr3R 21761103 21761154 chr3R 21768515 21768531 mdg1 10 7403 5.5 3.5 4.5 1.8 7428 chr3R 21761103 exon CG42335 + chr3R 21764817 intron CG42335 + chr3R 21768531 exon CG42335 + chr3R_10_21760001 chr3R_21760001 RAL-383 2252 chr3R 21903615 21903634 chr3R 21903729 21903750 6 116 0.0 3.5 1.8 2.1 135 chr3R 21903615 intron CG6678 + chr3R 21903682 intron CG6678 + chr3R 21903750 intron CG6678 + chr3R_6_21900001 chr3R_21900001 RAL-383 2253 chr3R 21907534 21907534 chr3R 28831801 28831802 11 6924267 21.0 8.0 14.5 0.7 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_11_25365001 chr3R_25365001 RAL-383 2254 chr3R 21907535 21907535 chr3R 28831801 28831802 28 6924266 21.5 8.0 14.8 1.8 6924267 chr3R 21907535 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_28_25365001 chr3R_25365001 RAL-383 2255 chr3R 9620956 9620956 chr3R 21907536 21907536 5 12286580 23.5 21.0 22.2 0.2 12286580 chr3R 9620956 intron CG8312 + chr3R 15764246 intergenic not near genes chr3R 21907536 intergenic CG6678 + chr3R_5_15760001 chr3R_15760001 RAL-383 2256 chr3R 21907536 21907536 chr3R 26659335 26659337 4 4751800 22.0 13.5 17.8 0.2 4751801 chr3R 21907536 intergenic CG6678 + chr3R 24283436 intergenic CR45662 - chr3R 26659337 intron beat-VII - chr3R_4_24280001 chr3R_24280001 RAL-383 2257 chr3R 21907536 21907536 chr3R 28831801 28831802 37 6924266 22.0 8.0 15.0 2.3 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_37_25365001 chr3R_25365001 RAL-383 2258 chr3R 21919001 21919017 chr3R 21919101 21919117 6 100 0.0 6.5 3.2 1.4 116 chr3R 21919001 intergenic not near genes chr3R 21919059 intergenic not near genes chr3R 21919117 intergenic not near genes chr3R_6_21915001 chr3R_21915001 RAL-383 2259 chr3R 21996809 21996854 chr3R 21997260 21997302 8 446 1.0 0.0 0.5 5.3 493 chr3R 21996809 intron Eip93F + chr3R 21997056 intron Eip93F + chr3R 21997302 intron Eip93F + chr3R_8_21995001 chr3R_21995001 RAL-383 2260 chr3R 22055089 22055121 chr3R 22055203 22055235 6 114 2.5 1.5 2.0 2.0 146 chr3R 22055089 intron how + chr3R 22055162 intron how + chr3R 22055235 intron how + chr3R_6_22055001 chr3R_22055001 RAL-383 2261 chr3R 22055559 22055574 chr3R 22055768 22055783 5 209 4.0 6.5 5.2 0.8 224 chr3R 22055559 intron how + chr3R 22055671 intron how + chr3R 22055783 intron how + chr3R_5_22055001 chr3R_22055001 RAL-383 2262 chr3R 22055577 22055585 chr3R 22055750 22055774 4 194 3.5 3.0 3.2 1.0 197 chr3R 22055577 intron how + chr3R 22055676 intron how + chr3R 22055774 intron how + chr3R_4_22055001 chr3R_22055001 RAL-383 2263 chr3R 22084607 22084626 chr3R 22084716 22084735 8 108 1.5 9.0 5.2 1.3 128 chr3R 22084607 intergenic not near genes chr3R 22084671 intergenic not near genes chr3R 22084735 intergenic not near genes chr3R_8_22080001 chr3R_22080001 RAL-383 2264 chr3R 22115338 22115384 chr3R 22115756 22115802 16 418 2.0 2.0 2.0 5.3 464 chr3R 22115338 intergenic Ir94a +,Ir94b - chr3R 22115570 exon Ir94b - chr3R 22115802 exon Ir94b - chr3R_16_22115001 chr3R_22115001 RAL-383 2265 chr3R 22117409 22117447 chr3R 22117505 22117543 20 95 4.5 7.5 6.0 2.9 134 chr3R 22117409 intergenic Ir94b -,Ir94c - chr3R 22117476 intergenic Ir94c -,Ir94b - chr3R 22117543 intergenic Ir94c -,Ir94b - chr3R_20_22115001 chr3R_22115001 RAL-383 2266 chr3R 22153570 22153594 chr3R 22153660 22153694 5 98 3.5 2.0 2.8 1.3 124 chr3R 22153570 intron SKIP + chr3R 22153632 intron SKIP + chr3R 22153694 intron SKIP + chr3R_5_22150001 chr3R_22150001 RAL-383 2267 chr3R 22234071 22234097 chr3R 22234165 22234194 5 96 4.5 10.5 7.5 0.6 123 chr3R 22234071 intron SKIP + chr3R 22234132 intron SKIP + chr3R 22234194 intron SKIP + chr3R_5_22230001 chr3R_22230001 RAL-383 2268 chr3R 22234662 22234714 chr3R 22236001 22236053 pogo 17 1336 4.5 2.5 3.5 3.8 1391 chr3R 22234662 intron SKIP + chr3R 22235358 intron SKIP + chr3R 22236053 intron SKIP + chr3R_17_22235001 chr3R_22235001 RAL-383 2269 chr3R 22239471 22239522 chr3R 22248551 22248590 roo 6 9074 4.0 0.0 2.0 2.0 9119 chr3R 22239471 intron SKIP + chr3R 22244030 intron SKIP + chr3R 22248590 intron SKIP + chr3R_6_22240001 chr3R_22240001 RAL-383 2270 chr3R 22330619 22330654 chr3R 22332308 22332341 7 1687 28.0 22.0 25.0 0.3 1722 chr3R 22330619 intergenic CG7080 +,CG33721 + chr3R 22331480 exon CG33721 + chr3R 22332341 exon CG13862 + chr3R_7_22330001 chr3R_22330001 RAL-383 2271 chr3R 22336044 22336073 chr3R 22336143 22336172 4 99 0.5 1.5 1.0 2.0 128 chr3R 22336044 intron CG5388 - chr3R 22336108 intron CG5388 - chr3R 22336172 intron CG5388 - chr3R_4_22335001 chr3R_22335001 RAL-383 2272 chr3R 22337765 22337807 chr3R 22337887 22337922 13 118 2.5 4.5 3.5 2.9 157 chr3R 22337765 intron CG5388 - chr3R 22337844 intron CG5388 - chr3R 22337922 intron CG5388 - chr3R_13_22335001 chr3R_22335001 RAL-383 2273 chr3R 22433077 22433094 chr3R 22433197 22433214 4 120 8.0 4.0 6.0 0.6 137 chr3R 22433077 intron CG13847 - chr3R 22433146 intron CG13847 - chr3R 22433214 intron CG13847 - chr3R_4_22430001 chr3R_22430001 RAL-383 2274 chr3R 22437775 22437823 chr3R 22437885 22437918 9 107 1.0 1.5 1.2 4.1 143 chr3R 22437775 intergenic not near genes chr3R 22437846 intergenic not near genes chr3R 22437918 intergenic not near genes chr3R_9_22435001 chr3R_22435001 RAL-383 2275 chr3R 22450531 22450547 chr3R 22453190 22453197 NOF 8 2655 6.5 4.5 5.5 1.2 2666 chr3R 22450531 intron CG34376 + chr3R 22451864 intron CG34376 + chr3R 22453197 intron CG34376 + chr3R_8_22450001 chr3R_22450001 RAL-383 2276 chr3R 22450551 22450574 chr3R 22453186 22453234 NOF 5 2649 4.5 4.0 4.2 1.0 2683 chr3R 22450551 intron CG34376 + chr3R 22451892 intron CG34376 + chr3R 22453234 intron CG34376 + chr3R_5_22450001 chr3R_22450001 RAL-383 2277 chr3R 22507767 22507815 chr3R 22507871 22507916 6 92 2.5 5.0 3.8 1.2 149 chr3R 22507767 intron Octbeta1R + chr3R 22507842 intron Octbeta1R + chr3R 22507916 intron Octbeta1R + chr3R_6_22505001 chr3R_22505001 RAL-383 2278 chr3R 22538430 22538474 chr3R 22538535 22538579 15 104 2.0 8.0 5.0 2.5 149 chr3R 22538430 intron CG5326 - chr3R 22538504 intron CG5326 - chr3R 22538579 intron CG5326 - chr3R_15_22535001 chr3R_22535001 RAL-383 2279 chr3R 22796880 22796900 chr3R 22796982 22797012 5 107 5.0 4.0 4.5 0.9 132 chr3R 22796880 intergenic not near genes chr3R 22796946 intergenic not near genes chr3R 22797012 intergenic not near genes chr3R_5_22795001 chr3R_22795001 RAL-383 2280 chr3R 22860133 22860173 chr3R 22860245 22860285 9 112 2.0 1.0 1.5 3.6 152 chr3R 22860133 intergenic not near genes chr3R 22860209 intergenic not near genes chr3R 22860285 intergenic not near genes chr3R_9_22860001 chr3R_22860001 RAL-383 2281 chr3R 22881184 22881192 chr3R 22884910 22884913 Doc 4 3724 7.5 0.5 4.0 0.8 3729 chr3R 22881184 intergenic not near genes chr3R 22883048 intergenic not near genes chr3R 22884913 intergenic not near genes chr3R_4_22880001 chr3R_22880001 RAL-383 2282 chr3R 22934666 22934705 chr3R 22934965 22934999 13 291 2.0 8.5 5.2 2.1 333 chr3R 22934666 intron klg + chr3R 22934832 intron klg + chr3R 22934999 intron klg + chr3R_13_22930001 chr3R_22930001 RAL-383 2283 chr3R 22974264 22974308 chr3R 22974368 22974412 7 102 0.0 1.0 0.5 4.7 148 chr3R 22974264 intergenic not near genes chr3R 22974338 intergenic not near genes chr3R 22974412 intergenic not near genes chr3R_7_22970001 chr3R_22970001 RAL-383 2284 chr3R 22993490 22993536 chr3R 22993640 22993679 14 143 6.5 3.5 5.0 2.3 189 chr3R 22993490 intron Nha2 - chr3R 22993584 intron Nha2 - chr3R 22993679 intron Nha2 - chr3R_14_22990001 chr3R_22990001 RAL-383 2285 chr3R 23011357 23011396 chr3R 23011473 23011512 9 116 4.0 4.0 4.0 1.8 155 chr3R 23011357 intergenic not near genes chr3R 23011434 intergenic CR44225 - chr3R 23011512 intergenic CR44225 - chr3R_9_23010001 chr3R_23010001 RAL-383 2286 chr3R 23070638 23070662 chr3R 23070738 23070740 5 93 2.0 0.0 1.0 2.5 102 chr3R 23070638 3` UTR CG13830 - chr3R 23070689 3` UTR CG13830 - chr3R 23070740 3` UTR CG13830 - chr3R_5_23070001 chr3R_23070001 RAL-383 2287 chr3R 23073632 23073688 chr3R 23073741 23073795 12 101 5.5 2.0 3.8 2.5 163 chr3R 23073632 intron CG13830 - chr3R 23073714 intron CG13830 - chr3R 23073795 intron CG13830 - chr3R_12_23070001 chr3R_23070001 RAL-383 2288 chr3R 23082935 23082974 chr3R 23083154 23083172 6 207 8.5 6.0 7.2 0.7 237 chr3R 23082935 intron CG13830 - chr3R 23083054 intron CG13830 - chr3R 23083172 intron CG13830 - chr3R_6_23080001 chr3R_23080001 RAL-383 2289 chr3R 23101387 23101402 chr3R 23101477 23101514 5 102 2.0 1.5 1.8 1.8 127 chr3R 23101387 intron CG13830 - chr3R 23101450 intron CG13830 - chr3R 23101514 intron CG13830 - chr3R_5_23100001 chr3R_23100001 RAL-383 2290 chr3R 23101404 23101410 chr3R 23101472 23101522 7 100 1.5 1.0 1.2 3.2 118 chr3R 23101404 intron CG13830 - chr3R 23101463 intron CG13830 - chr3R 23101522 intron CG13830 - chr3R_7_23100001 chr3R_23100001 RAL-383 2291 chr3R 23133564 23133614 chr3R 23133665 23133695 20 95 4.5 5.0 4.8 3.4 131 chr3R 23133564 intron hh - chr3R 23133630 intron hh - chr3R 23133695 intron hh - chr3R_20_23130001 chr3R_23130001 RAL-383 2292 chr3R 23182665 23182700 chr3R 23182768 23182791 8 101 1.5 4.0 2.8 2.1 126 chr3R 23182665 intron Irk1 + chr3R 23182728 intron Irk1 + chr3R 23182791 intron Irk1 + chr3R_8_23180001 chr3R_23180001 RAL-383 2293 chr3R 23211963 23211988 chr3R 23212060 23212085 8 95 3.5 3.0 3.2 1.9 122 chr3R 23211963 intron cnc - chr3R 23212024 intron cnc - chr3R 23212085 intron cnc - chr3R_8_23210001 chr3R_23210001 RAL-383 2294 chr3R 23333854 23333867 chr3R 23333964 23333977 4 109 2.0 3.0 2.5 1.1 123 chr3R 23333854 intron pnt - chr3R 23333916 intron pnt - chr3R 23333977 intron pnt - chr3R_4_23330001 chr3R_23330001 RAL-383 2295 chr3R 23338875 23338909 chr3R 23338972 23338978 5 86 2.0 2.5 2.2 1.6 103 chr3R 23338875 intron pnt - chr3R 23338926 intron pnt - chr3R 23338978 intron pnt - chr3R_5_23335001 chr3R_23335001 RAL-383 2296 chr3R 23346828 23346864 chr3R 23346926 23346962 7 98 3.0 3.0 3.0 1.8 134 chr3R 23346828 intergenic not near genes chr3R 23346895 intergenic not near genes chr3R 23346962 intergenic not near genes chr3R_7_23345001 chr3R_23345001 RAL-383 2297 chr3R 23363660 23363704 chr3R 23363766 23363810 17 106 6.5 4.5 5.5 2.6 150 chr3R 23363660 intergenic CG4408 - chr3R 23363735 intergenic CG4408 - chr3R 23363810 intergenic CG4408 - chr3R_17_23360001 chr3R_23360001 RAL-383 2298 chr3R 23558380 23558428 chr3R 23560181 23560214 Bari1 18 1800 3.0 5.5 4.2 3.5 1834 chr3R 23558380 intron beat-IV + chr3R 23559297 intron beat-IV + chr3R 23560214 intron beat-IV + chr3R_18_23555001 chr3R_23555001 RAL-383 2299 chr3R 23564421 23564476 chr3R 23564585 23564640 10 162 3.5 4.0 3.8 2.1 219 chr3R 23564421 intron beat-IV + chr3R 23564530 intron beat-IV + chr3R 23564640 intron beat-IV + chr3R_10_23560001 chr3R_23560001 RAL-383 2300 chr3R 23574397 23574430 chr3R 23574956 23574988 7 558 1.5 6.0 3.8 1.5 591 chr3R 23574397 exon beat-IV + chr3R 23574692 intron beat-IV + chr3R 23574988 intron beat-IV + chr3R_7_23570001 chr3R_23570001 RAL-383 2301 chr3R 23627531 23627640 chr3R 23627628 23627739 12 97 0.0 0.0 0.0 12.0 208 chr3R 23627531 intron CG31145 - chr3R 23627635 intron CG31145 - chr3R 23627739 intron CG31145 - chr3R_12_23625001 chr3R_23625001 RAL-383 2302 chr3R 23684683 23684706 chr3R 23685184 23685197 roo 5 497 3.0 4.0 3.5 1.1 514 chr3R 23684683 exon CG18754 + chr3R 23684940 intron CG18754 + chr3R 23685197 exon CG18754 + chr3R_5_23680001 chr3R_23680001 RAL-383 2303 chr3R 23723319 23723365 chr3R 23723423 23723464 7 103 3.0 2.5 2.8 1.8 145 chr3R 23723319 intergenic CG10365 + chr3R 23723392 5` UTR CG10365 + chr3R 23723464 5` UTR CG10365 + chr3R_7_23720001 chr3R_23720001 RAL-383 2304 chr3R 23820616 23820663 chr3R 23820720 23820762 10 103 3.5 2.0 2.8 2.6 146 chr3R 23820616 5` UTR CG34355 + chr3R 23820689 5` UTR CG34355 + chr3R 23820762 5` UTR CG34355 + chr3R_10_23820001 chr3R_23820001 RAL-383 2305 chr3R 23835386 23835416 chr3R 23844556 23844574 roo 9 9167 5.5 0.5 3.0 2.2 9188 chr3R 23835386 intron CG34355 + chr3R 23839980 intron CG34355 + chr3R 23844574 intron CG34355 + chr3R_9_23835001 chr3R_23835001 RAL-383 2306 chr3R 23937601 23937612 chr3R 23937719 23937730 5 117 1.5 1.5 1.5 2.0 129 chr3R 23937601 exon Gdh - chr3R 23937666 intron Gdh - chr3R 23937730 intron Gdh - chr3R_5_23935001 chr3R_23935001 RAL-383 2307 chr3R 23937617 23937639 chr3R 23937718 23937757 5 115 0.5 1.5 1.0 2.5 140 chr3R 23937617 exon Gdh - chr3R 23937687 intron Gdh - chr3R 23937757 exon Gdh - chr3R_5_23935001 chr3R_23935001 RAL-383 2308 chr3R 23944890 23944925 chr3R 23944995 23945025 8 104 5.0 2.0 3.5 1.8 135 chr3R 23944890 intron CG12268 - chr3R 23944958 intron CG12268 - chr3R 23945025 exon CG12268 - chr3R_8_23940001 chr3R_23940001 RAL-383 2309 chr3R 23949039 23949070 chr3R 23949124 23949167 14 96 4.5 3.5 4.0 2.8 128 chr3R 23949039 intergenic not near genes chr3R 23949103 intergenic not near genes chr3R 23949167 intergenic not near genes chr3R_14_23945001 chr3R_23945001 RAL-383 2310 chr3R 24011655 24011678 chr3R 24011752 24011777 9 101 0.0 7.5 3.8 1.9 122 chr3R 24011655 intron KrT95D - chr3R 24011716 intron KrT95D - chr3R 24011777 intron KrT95D - chr3R_9_24010001 chr3R_24010001 RAL-383 2311 chr3R 24014760 24014809 chr3R 24014865 24014914 14 104 2.0 3.0 2.5 4.0 154 chr3R 24014760 intron KrT95D - chr3R 24014837 intron KrT95D - chr3R 24014914 intron KrT95D - chr3R_14_24010001 chr3R_24010001 RAL-383 2312 chr3R 24041994 24042028 chr3R 24042127 24042161 9 133 0.5 9.0 4.8 1.6 167 chr3R 24041994 3` UTR spas + chr3R 24042078 3` UTR spas + chr3R 24042161 3` UTR spas + chr3R_9_24040001 chr3R_24040001 RAL-383 2313 chr3R 24076935 24076946 chr3R 24078422 24078433 hobo 4 1487 4.0 12.5 8.2 0.4 1498 chr3R 24076935 intron 4EHP - chr3R 24077684 intron 4EHP - chr3R 24078433 intron 4EHP - chr3R_4_24075001 chr3R_24075001 RAL-383 2314 chr3R 24199717 24199773 chr3R 24199817 24199868 7 99 3.5 1.5 2.5 2.0 151 chr3R 24199717 intron twin - chr3R 24199792 intron twin - chr3R 24199868 intron twin - chr3R_7_24195001 chr3R_24195001 RAL-383 2315 chr3R 24207204 24207244 chr3R 24212299 24212340 flea 9 5095 4.0 9.5 6.8 1.2 5136 chr3R 24207204 intron twin - chr3R 24209772 intron twin - chr3R 24212340 intron twin - chr3R_9_24205001 chr3R_24205001 RAL-383 2316 chr3R 24431580 24431618 chr3R 24431679 24431717 10 99 7.0 0.0 3.5 2.2 137 chr3R 24431580 intron nAChRalpha1 - chr3R 24431648 intron nAChRalpha1 - chr3R 24431717 intron nAChRalpha1 - chr3R_10_24430001 chr3R_24430001 RAL-383 2317 chr3R 24437048 24437093 chr3R 24437390 24437435 10 336 3.0 1.5 2.2 3.1 387 chr3R 24437048 intron nAChRalpha1 - chr3R 24437242 intron nAChRalpha1 - chr3R 24437435 intron nAChRalpha1 - chr3R_10_24435001 chr3R_24435001 RAL-383 2318 chr3R 24493276 24493303 chr3R 24493525 24493552 BS 8 249 5.0 9.5 7.2 1.0 276 chr3R 24493276 intergenic not near genes chr3R 24493414 intergenic not near genes chr3R 24493552 intergenic not near genes chr3R_8_24490001 chr3R_24490001 RAL-383 2319 chr3R 24527783 24527834 chr3R 24527894 24527945 13 111 3.0 2.5 2.8 3.4 162 chr3R 24527783 intergenic CG13618 +,CG6607 + chr3R 24527864 intergenic CG6607 +,CG13618 + chr3R 24527945 intergenic CG6607 +,CG13618 + chr3R_13_24525001 chr3R_24525001 RAL-383 2320 chr3R 24667590 24667624 chr3R 24667682 24667721 8 96 3.5 0.0 1.8 2.9 131 chr3R 24667590 intron slo + chr3R 24667656 intron slo + chr3R 24667721 intron slo + chr3R_8_24665001 chr3R_24665001 RAL-383 2321 chr3R 24893462 24893485 chr3R 24893562 24893584 10 98 4.5 2.0 3.2 2.4 122 chr3R 24893462 intron CG31121 - chr3R 24893523 intron CG31121 - chr3R 24893584 intron CG31121 - chr3R_10_24890001 chr3R_24890001 RAL-383 2322 chr3R 24927108 24927151 chr3R 24931919 24931961 Doc 6 4811 2.0 5.5 3.8 1.2 4853 chr3R 24927108 intergenic Trf4-2 + chr3R 24929534 intergenic not near genes chr3R 24931961 intergenic CG11771 + chr3R_6_24925001 chr3R_24925001 RAL-383 2323 chr3R 24973928 24973979 chr3R 24974024 24974064 14 93 2.5 1.5 2.0 4.7 136 chr3R 24973928 intergenic not near genes chr3R 24973996 intergenic not near genes chr3R 24974064 intergenic not near genes chr3R_14_24970001 chr3R_24970001 RAL-383 2324 chr3R 25004898 25004918 chr3R 25004983 25005020 8 99 2.0 1.5 1.8 2.9 122 chr3R 25004898 intron tnc + chr3R 25004959 intron tnc + chr3R 25005020 intron tnc + chr3R_8_25000001 chr3R_25000001 RAL-383 2325 chr3R 25136379 25136417 chr3R 25136479 25136517 9 98 4.0 2.0 3.0 2.2 138 chr3R 25136379 3` UTR Bili + chr3R 25136448 3` UTR Bili + chr3R 25136517 3` UTR Bili + chr3R_9_25135001 chr3R_25135001 RAL-383 2326 chr3R 25158140 25158170 chr3R 25158330 25158360 8 186 2.0 6.0 4.0 1.6 220 chr3R 25158140 intergenic not near genes chr3R 25158250 intergenic not near genes chr3R 25158360 intergenic not near genes chr3R_8_25155001 chr3R_25155001 RAL-383 2327 chr3R 25241140 25241189 chr3R 25241239 25241290 10 95 5.5 2.5 4.0 2.0 150 chr3R 25241140 exon to + chr3R 25241215 3` UTR to + chr3R 25241290 3` UTR to + chr3R_10_25240001 chr3R_25240001 RAL-383 2328 chr3R 25296148 25296195 chr3R 25296249 25296295 15 100 5.5 5.0 5.2 2.4 147 chr3R 25296148 3` UTR CG31097 - chr3R 25296222 3` UTR CG31097 - chr3R 25296295 3` UTR CG31097 - chr3R_15_25295001 chr3R_25295001 RAL-383 2329 chr3R 25368453 25368502 chr3R 25368591 25368615 19 135 3.0 0.0 1.5 7.6 162 chr3R 25368453 intron Fur1 - chr3R 25368534 intron Fur1 - chr3R 25368615 intron Fur1 - chr3R_19_25365001 chr3R_25365001 RAL-383 2330 chr3R 25411764 25411806 chr3R 25411880 25411929 7 118 0.5 3.5 2.0 2.3 165 chr3R 25411764 intron Fur1 - chr3R 25411846 intron Fur1 - chr3R 25411929 intron Fur1 - chr3R_7_25410001 chr3R_25410001 RAL-383 2331 chr3R 25461394 25461440 chr3R 25462008 25462054 11 614 2.0 4.5 3.2 2.6 660 chr3R 25461394 intron Fur1 - chr3R 25461724 intron Fur1 - chr3R 25462054 intron Fur1 - chr3R_11_25460001 chr3R_25460001 RAL-383 2332 chr3R 25464489 25464521 chr3R 25464811 25464847 10 329 2.0 3.5 2.8 2.6 358 chr3R 25464489 intron Fur1 - chr3R 25464668 intron Fur1 - chr3R 25464847 intron Fur1 - chr3R_10_25460001 chr3R_25460001 RAL-383 2333 chr3R 25508499 25508531 chr3R 25508634 25508658 12 132 1.5 2.0 1.8 4.3 159 chr3R 25508499 intergenic CG5111 + chr3R 25508578 intergenic CG5111 + chr3R 25508658 intergenic CG5111 + chr3R_12_25505001 chr3R_25505001 RAL-383 2334 chr3R 25514426 25514449 chr3R 25514527 25514550 7 101 0.0 6.0 3.0 1.8 124 chr3R 25514426 intergenic not near genes chr3R 25514488 intergenic not near genes chr3R 25514550 intergenic not near genes chr3R_7_25510001 chr3R_25510001 RAL-383 2335 chr3R 7773344 7773344 chr3R 25538124 25538124 12 17764780 10.5 11.5 11.0 1.0 17764780 chr3R 7773344 intergenic not near genes chr3R 16655734 intergenic modSP - chr3R 25538124 intron msi + chr3R_12_16655001 chr3R_16655001 RAL-383 2336 chr3R 25597234 25597271 chr3R 25597345 25597382 11 109 6.0 7.0 6.5 1.5 148 chr3R 25597234 intron,intron msi +,ymp - chr3R 25597308 intron,intron msi +,ymp - chr3R 25597382 intron,intron msi +,ymp - chr3R_11_25595001 chr3R_25595001 RAL-383 2337 chr3R 25652298 25652323 chr3R 25652395 25652420 10 96 5.5 4.5 5.0 1.7 122 chr3R 25652298 intergenic not near genes chr3R 25652359 intergenic not near genes chr3R 25652420 intergenic not near genes chr3R_10_25650001 chr3R_25650001 RAL-383 2338 chr3R 25652324 25652340 chr3R 25652392 25652437 8 93 3.0 4.0 3.5 1.8 113 chr3R 25652324 intergenic not near genes chr3R 25652380 intergenic not near genes chr3R 25652437 intergenic not near genes chr3R_8_25650001 chr3R_25650001 RAL-383 2339 chr3R 25671231 25671264 chr3R 25671336 25671382 9 109 4.0 2.5 3.2 2.1 151 chr3R 25671231 intron Lgr3 + chr3R 25671306 intron Lgr3 + chr3R 25671382 intron Lgr3 + chr3R_9_25670001 chr3R_25670001 RAL-383 2340 chr3R 25689123 25689131 chr3R 25689239 25689255 6 124 9.0 2.0 5.5 0.9 132 chr3R 25689123 intergenic not near genes chr3R 25689189 intergenic not near genes chr3R 25689255 intergenic not near genes chr3R_6_25685001 chr3R_25685001 RAL-383 2341 chr3R 25689132 25689160 chr3R 25689237 25689288 7 121 5.0 2.0 3.5 1.6 156 chr3R 25689132 intergenic not near genes chr3R 25689210 intergenic not near genes chr3R 25689288 intergenic not near genes chr3R_7_25685001 chr3R_25685001 RAL-383 2342 chr3R 25720785 25720838 chr3R 25720897 25720943 7 105 0.0 2.0 1.0 3.5 158 chr3R 25720785 intron LpR2 - chr3R 25720864 intron LpR2 - chr3R 25720943 intron LpR2 - chr3R_7_25720001 chr3R_25720001 RAL-383 2343 chr3R 25725824 25725860 chr3R 25734986 25735039 roo 12 9178 3.5 3.5 3.5 2.7 9215 chr3R 25725824 intron LpR2 - chr3R 25730432 intron LpR2 - chr3R 25735039 intron LpR2 - chr3R_12_25730001 chr3R_25730001 RAL-383 2344 chr3R 25755193 25755227 chr3R 25756056 25756107 15 877 3.5 2.5 3.0 3.8 914 chr3R 25755193 intron LpR1 - chr3R 25755650 intron LpR1 - chr3R 25756107 intron LpR1 - chr3R_15_25755001 chr3R_25755001 RAL-383 2345 chr3R 25832692 25832717 chr3R 25841878 25841913 roo 5 9188 2.5 2.5 2.5 1.4 9221 chr3R 25832692 exon alpha4GT2 + chr3R 25837302 intron alpha4GT2 + chr3R 25841913 exon alpha4GT2 + chr3R_5_25835001 chr3R_25835001 RAL-383 2346 chr3R 25843620 25843668 chr3R 25843770 25843818 10 150 3.5 5.0 4.2 1.9 198 chr3R 25843620 intergenic CR45653 + chr3R 25843719 intergenic CR45653 + chr3R 25843818 intergenic CR45653 + chr3R_10_25840001 chr3R_25840001 RAL-383 2347 chr3R 25900227 25900280 chr3R 25900324 25900377 10 93 3.5 3.0 3.2 2.4 150 chr3R 25900227 5` UTR CG31091 + chr3R 25900302 5` UTR CG31091 + chr3R 25900377 5` UTR CG31091 + chr3R_10_25900001 chr3R_25900001 RAL-383 2348 chr3R 25932724 25932752 chr3R 25933136 25933164 6 412 3.5 1.5 2.5 1.7 440 chr3R 25932724 intron CCAP-R - chr3R 25932944 intron CCAP-R - chr3R 25933164 intron CCAP-R - chr3R_6_25930001 chr3R_25930001 RAL-383 2349 chr3R 26013839 26013857 chr3R 26013939 26013957 4 100 6.0 9.0 7.5 0.5 118 chr3R 26013839 intergenic not near genes chr3R 26013898 intergenic not near genes chr3R 26013957 intergenic not near genes chr3R_4_26010001 chr3R_26010001 RAL-383 2350 chr3R 26093825 26093875 chr3R 26093923 26093973 8 95 5.0 5.0 5.0 1.3 148 chr3R 26093825 intron dys - chr3R 26093899 intron dys - chr3R 26093973 intron dys - chr3R_8_26090001 chr3R_26090001 RAL-383 2351 chr3R 26121928 26121981 chr3R 26122045 26122095 15 110 0.5 3.5 2.0 5.0 167 chr3R 26121928 intron CG31324 + chr3R 26122012 intron CG31324 + chr3R 26122095 intron CG31324 + chr3R_15_26120001 chr3R_26120001 RAL-383 2352 chr3R 26126535 26126570 chr3R 26126641 26126676 10 106 3.0 8.0 5.5 1.5 141 chr3R 26126535 intron CG31324 + chr3R 26126606 intron CG31324 + chr3R 26126676 intron,5` UTR CG31324 +,CG14556 + chr3R_10_26125001 chr3R_26125001 RAL-383 2353 chr3R 26241240 26241280 chr3R 26241351 26241378 13 108 3.0 4.5 3.8 2.7 138 chr3R 26241240 intron CR42745 + chr3R 26241309 intron CR42745 + chr3R 26241378 intron CR42745 + chr3R_13_26240001 chr3R_26240001 RAL-383 2354 chr3R 26349251 26349263 chr3R 26349367 26349379 5 116 5.5 0.0 2.8 1.3 128 chr3R 26349251 intron CG33970 + chr3R 26349315 intron CG33970 + chr3R 26349379 intron CG33970 + chr3R_5_26345001 chr3R_26345001 RAL-383 2355 chr3R 26370319 26370349 chr3R 26370422 26370452 4 103 0.0 3.5 1.8 1.4 133 chr3R 26370319 intergenic not near genes chr3R 26370386 intergenic not near genes chr3R 26370452 intergenic not near genes chr3R_4_26370001 chr3R_26370001 RAL-383 2356 chr3R 26376310 26376340 chr3R 26385485 26385520 roo 5 9175 7.0 0.0 3.5 1.1 9210 chr3R 26376310 intergenic not near genes chr3R 26380915 intergenic not near genes chr3R 26385520 intergenic not near genes chr3R_5_26380001 chr3R_26380001 RAL-383 2357 chr3R 26403977 26404022 chr3R 26405151 26405196 13 1173 2.5 3.5 3.0 3.2 1219 chr3R 26403977 intergenic ppk15 - chr3R 26404586 intergenic not near genes chr3R 26405196 intergenic not near genes chr3R_13_26400001 chr3R_26400001 RAL-383 2358 chr3R 26419614 26419658 chr3R 26419715 26419746 5 94 4.5 3.5 4.0 1.0 132 chr3R 26419614 intergenic not near genes chr3R 26419680 intergenic not near genes chr3R 26419746 intergenic not near genes chr3R_5_26415001 chr3R_26415001 RAL-383 2359 chr3R 26436951 26436968 chr3R 26437421 26437421 5 465 6.0 6.5 6.2 0.7 470 chr3R 26436951 intergenic not near genes chr3R 26437186 intergenic not near genes chr3R 26437421 intergenic not near genes chr3R_5_26435001 chr3R_26435001 RAL-383 2360 chr3R 26436969 26436999 chr3R 26437417 26437444 11 454 3.0 5.0 4.0 2.2 475 chr3R 26436969 intergenic not near genes chr3R 26437206 intergenic not near genes chr3R 26437444 intergenic not near genes chr3R_11_26435001 chr3R_26435001 RAL-383 2361 chr3R 26503594 26503601 chr3R 26504317 26504361 4 740 13.5 23.5 18.5 0.2 767 chr3R 26503594 intron plum - chr3R 26503978 intron plum - chr3R 26504361 intron plum - chr3R_4_26500001 chr3R_26500001 RAL-383 2362 chr3R 26508914 26508945 chr3R 26509370 26509401 9 451 2.0 4.5 3.2 2.1 487 chr3R 26508914 intron plum - chr3R 26509158 intron plum - chr3R 26509401 intron plum - chr3R_9_26505001 chr3R_26505001 RAL-383 2363 chr3R 26510490 26510530 chr3R 26519565 26519611 roo 14 9080 5.5 2.5 4.0 2.8 9121 chr3R 26510490 intron plum - chr3R 26515050 intron plum - chr3R 26519611 intron,5` UTR plum -,CR45226 + chr3R_14_26515001 chr3R_26515001 RAL-383 2364 chr3R 26522605 26522625 chr3R 26522708 26522731 10 103 7.5 5.0 6.2 1.4 126 chr3R 26522605 intron plum - chr3R 26522668 intron plum - chr3R 26522731 intron plum - chr3R_10_26520001 chr3R_26520001 RAL-383 2365 chr3R 26522630 26522652 chr3R 26522707 26522758 4 99 4.0 4.5 4.2 0.8 128 chr3R 26522630 intron plum - chr3R 26522694 intron plum - chr3R 26522758 intron plum - chr3R_4_26520001 chr3R_26520001 RAL-383 2366 chr3R 26558328 26558360 chr3R 26565646 26565682 Stalker4 11 7325 1.5 4.5 3.0 2.8 7354 chr3R 26558328 intron scrib + chr3R 26562005 intron scrib + chr3R 26565682 intron scrib + chr3R_11_26560001 chr3R_26560001 RAL-383 2367 chr3R 26571575 26571621 chr3R 26571673 26571719 13 95 4.0 4.5 4.2 2.5 144 chr3R 26571575 intron scrib + chr3R 26571647 intron scrib + chr3R 26571719 intron scrib + chr3R_13_26570001 chr3R_26570001 RAL-383 2368 chr3R 26607744 26607764 chr3R 26607815 26607860 6 89 4.0 5.5 4.8 1.0 116 chr3R 26607744 5` UTR CR44951 + chr3R 26607802 5` UTR CR44951 + chr3R 26607860 5` UTR CR44951 + chr3R_6_26605001 chr3R_26605001 RAL-383 2369 chr3R 26611324 26611362 chr3R 26611418 26611457 5 93 2.0 3.0 2.5 1.4 133 chr3R 26611324 intergenic not near genes chr3R 26611390 intergenic not near genes chr3R 26611457 intergenic not near genes chr3R_5_26610001 chr3R_26610001 RAL-383 2370 chr3R 26642712 26642755 chr3R 26643125 26643168 jockey 12 411 5.0 5.0 5.0 2.0 456 chr3R 26642712 intergenic not near genes chr3R 26642940 intergenic not near genes chr3R 26643168 intergenic not near genes chr3R_12_26640001 chr3R_26640001 RAL-383 2371 chr3R 26660626 26660674 chr3R 26660730 26660734 7 90 2.5 0.0 1.2 3.2 108 chr3R 26660626 intron beat-VII - chr3R 26660680 intron beat-VII - chr3R 26660734 intron beat-VII - chr3R_7_26660001 chr3R_26660001 RAL-383 2372 chr3R 26724053 26724085 chr3R 26724133 26724160 5 86 3.5 1.5 2.5 1.4 107 chr3R 26724053 intron CG6420 - chr3R 26724106 intron CG6420 - chr3R 26724160 intron CG6420 - chr3R_5_26720001 chr3R_26720001 RAL-383 2373 chr3R 26789584 26789598 chr3R 26789683 26789697 5 99 0.5 0.0 0.2 4.2 113 chr3R 26789584 intergenic not near genes chr3R 26789640 intergenic not near genes chr3R 26789697 intergenic not near genes chr3R_5_26785001 chr3R_26785001 RAL-383 2374 chr3R 26810531 26810586 chr3R 26811036 26811091 roo 13 505 4.0 3.0 3.5 2.9 560 chr3R 26810531 intron Tl + chr3R 26810811 intron Tl + chr3R 26811091 intron Tl + chr3R_13_26810001 chr3R_26810001 RAL-383 2375 chr3R 26835131 26835152 chr3R 26835228 26835254 8 98 2.5 10.0 6.2 1.1 123 chr3R 26835131 intron Tl + chr3R 26835192 intron Tl + chr3R 26835254 intron Tl + chr3R_8_26835001 chr3R_26835001 RAL-383 2376 chr3R 26845552 26845599 chr3R 26845652 26845686 12 91 2.5 6.0 4.2 2.3 134 chr3R 26845552 intron Lerp - chr3R 26845619 intron Lerp - chr3R 26845686 intron Lerp - chr3R_12_26845001 chr3R_26845001 RAL-383 2377 chr3R 26852460 26852506 chr3R 26852567 26852601 5 105 0.0 5.5 2.8 1.3 141 chr3R 26852460 intron Lerp - chr3R 26852530 intron Lerp - chr3R 26852601 intron Lerp - chr3R_5_26850001 chr3R_26850001 RAL-383 2378 chr3R 26981069 26981115 chr3R 26981173 26981220 5 102 0.5 3.0 1.8 1.8 151 chr3R 26981069 intron CG14253 + chr3R 26981144 intron CG14253 + chr3R 26981220 intron CG14253 + chr3R_5_26980001 chr3R_26980001 RAL-383 2379 chr3R 26990878 26990916 chr3R 26990982 26991020 8 103 2.5 5.0 3.8 1.7 142 chr3R 26990878 intergenic not near genes chr3R 26990949 intergenic not near genes chr3R 26991020 intergenic not near genes chr3R_8_26990001 chr3R_26990001 RAL-383 2380 chr3R 27007390 27007433 chr3R 27016540 27016588 roo 12 9152 3.5 2.5 3.0 3.0 9198 chr3R 27007390 intron RYa-R + chr3R 27011989 intron RYa-R + chr3R 27016588 intron RYa-R + chr3R_12_27010001 chr3R_27010001 RAL-383 2381 chr3R 27027661 27027697 chr3R 27027765 27027799 8 101 2.0 2.5 2.2 2.5 138 chr3R 27027661 intron RYa-R + chr3R 27027730 intron RYa-R + chr3R 27027799 intron RYa-R + chr3R_8_27025001 chr3R_27025001 RAL-383 2382 chr3R 27028705 27028756 chr3R 27028804 27028855 22 95 3.5 3.5 3.5 4.9 150 chr3R 27028705 intron RYa-R + chr3R 27028780 intron RYa-R + chr3R 27028855 intron RYa-R + chr3R_22_27025001 chr3R_27025001 RAL-383 2383 chr3R 27029163 27029200 chr3R 27029246 27029298 11 94 2.5 5.5 4.0 2.2 135 chr3R 27029163 intron RYa-R + chr3R 27029230 intron RYa-R + chr3R 27029298 intron RYa-R + chr3R_11_27025001 chr3R_27025001 RAL-383 2384 chr3R 27041796 27041842 chr3R 27041906 27041923 17 107 2.5 6.0 4.2 3.3 127 chr3R 27041796 intron RYa-R + chr3R 27041860 intron RYa-R + chr3R 27041923 intron RYa-R + chr3R_17_27040001 chr3R_27040001 RAL-383 2385 chr3R 27070842 27070879 chr3R 27071014 27071050 7 170 8.0 2.5 5.2 1.1 208 chr3R 27070842 intergenic not near genes chr3R 27070946 intergenic not near genes chr3R 27071050 intergenic not near genes chr3R_7_27070001 chr3R_27070001 RAL-383 2386 chr3R 27088092 27088123 chr3R 27088196 27088230 10 106 1.5 3.0 2.2 3.1 138 chr3R 27088092 intergenic Cpr97Ea - chr3R 27088161 intergenic Cpr97Ea - chr3R 27088230 intergenic Cpr97Ea - chr3R_10_27085001 chr3R_27085001 RAL-383 2387 chr3R 27140494 27140548 chr3R 27148124 27148178 412 14 7623 2.5 6.5 4.5 2.5 7684 chr3R 27140494 intron CG6051 - chr3R 27144336 intron CG6051 - chr3R 27148178 intron CG6051 - chr3R_14_27140001 chr3R_27140001 RAL-383 2388 chr3R 27301093 27301115 chr3R 27301199 27301221 7 105 6.5 7.0 6.8 0.9 128 chr3R 27301093 intron CG3339 - chr3R 27301157 intron CG3339 - chr3R 27301221 intron CG3339 - chr3R_7_27300001 chr3R_27300001 RAL-383 2389 chr3R 27301117 27301143 chr3R 27301198 27301249 8 102 2.5 6.5 4.5 1.5 132 chr3R 27301117 intron CG3339 - chr3R 27301183 intron CG3339 - chr3R 27301249 intron CG3339 - chr3R_8_27300001 chr3R_27300001 RAL-383 2390 chr3R 27329464 27329494 chr3R 27329552 27329591 9 95 2.0 3.0 2.5 2.6 127 chr3R 27329464 intergenic CG3330 - chr3R 27329528 intergenic CG3330 - chr3R 27329591 intergenic CG3330 - chr3R_9_27325001 chr3R_27325001 RAL-383 2391 chr3R 27342773 27342816 chr3R 27351374 27351417 Tirant 9 8598 3.5 3.0 3.2 2.1 8644 chr3R 27342773 intron CG42534 + chr3R 27347095 intron CG42534 + chr3R 27351417 intron CG42534 + chr3R_9_27345001 chr3R_27345001 RAL-383 2392 chr3R 27352477 27352524 chr3R 27352775 27352817 17 295 5.5 2.5 4.0 3.4 340 chr3R 27352477 intron CG42534 + chr3R 27352647 intron CG42534 + chr3R 27352817 intron CG42534 + chr3R_17_27350001 chr3R_27350001 RAL-383 2393 chr3R 27445227 27445276 chr3R 27445324 27445373 7 90 2.0 3.0 2.5 2.0 146 chr3R 27445227 intergenic not near genes chr3R 27445300 intergenic not near genes chr3R 27445373 intergenic not near genes chr3R_7_27445001 chr3R_27445001 RAL-383 2394 chr3R 27457848 27457887 chr3R 27457958 27457985 6 103 3.0 0.0 1.5 2.4 137 chr3R 27457848 intergenic not near genes chr3R 27457916 intergenic not near genes chr3R 27457985 intergenic not near genes chr3R_6_27455001 chr3R_27455001 RAL-383 2395 chr3R 27492358 27492399 chr3R 27492465 27492505 10 107 3.0 3.5 3.2 2.4 147 chr3R 27492358 intergenic not near genes chr3R 27492432 intergenic not near genes chr3R 27492505 intergenic not near genes chr3R_10_27490001 chr3R_27490001 RAL-383 2396 chr3R 27496572 27496599 chr3R 27496697 27496724 8 123 10.0 3.0 6.5 1.1 152 chr3R 27496572 intergenic not near genes chr3R 27496648 intergenic not near genes chr3R 27496724 intergenic not near genes chr3R_8_27495001 chr3R_27495001 RAL-383 2397 chr3R 27521140 27521184 chr3R 27530369 27530413 roo 14 9229 6.0 10.0 8.0 1.6 9273 chr3R 27521140 intron CG12885 + chr3R 27525776 intron CG12885 + chr3R 27530413 intron CG12885 + chr3R_14_27525001 chr3R_27525001 RAL-383 2398 chr3R 27619698 27619729 chr3R 27619818 27619864 12 123 4.0 1.0 2.5 3.4 166 chr3R 27619698 intron Tusp + chr3R 27619781 intron Tusp + chr3R 27619864 intron Tusp + chr3R_12_27615001 chr3R_27615001 RAL-383 2399 chr3R 27648621 27648855 chr3R 27648678 27648939 9 90 7.0 0.0 3.5 2.0 318 chr3R 27648621 intron tau - chr3R 27648780 intron tau - chr3R 27648939 intron tau - chr3R_9_27645001 chr3R_27645001 RAL-383 2400 chr3R 27705361 27705391 chr3R 27705445 27705472 5 87 0.5 2.5 1.5 2.0 111 chr3R 27705361 exon CG12428 - chr3R 27705416 intron CG12428 - chr3R 27705472 exon CG12428 - chr3R_5_27705001 chr3R_27705001 RAL-383 2401 chr3R 27725552 27725597 chr3R 27731014 27731059 I-element 4 5462 4.0 4.5 4.2 0.8 5507 chr3R 27725552 intergenic not near genes chr3R 27728306 intergenic not near genes chr3R 27731059 intergenic not near genes chr3R_4_27725001 chr3R_27725001 RAL-383 2402 chr3R 27743536 27743545 chr3R 27743642 27743653 6 108 3.5 4.5 4.0 1.2 117 chr3R 27743536 intron Ets98B + chr3R 27743594 intron Ets98B + chr3R 27743653 intron Ets98B + chr3R_6_27740001 chr3R_27740001 RAL-383 2403 chr3R 27786860 27786903 chr3R 27787025 27787058 10 162 4.0 6.0 5.0 1.7 198 chr3R 27786860 intron CG34353 - chr3R 27786959 intron CG34353 - chr3R 27787058 intron CG34353 - chr3R_10_27785001 chr3R_27785001 RAL-383 2404 chr3R 27853220 27853226 chr3R 27853409 27853434 5 197 0.5 5.5 3.0 1.2 214 chr3R 27853220 intron CG34353 - chr3R 27853327 intron CG34353 - chr3R 27853434 intron CG34353 - chr3R_5_27850001 chr3R_27850001 RAL-383 2405 chr3R 27856742 27856770 chr3R 27858245 27858258 hopper2 6 1498 8.0 2.0 5.0 1.0 1516 chr3R 27856742 intron CG34353 - chr3R 27857500 intron CG34353 - chr3R 27858258 intron CG34353 - chr3R_6_27855001 chr3R_27855001 RAL-383 2406 chr3R 27862960 27862980 chr3R 27868257 27868305 Transpac 7 5318 0.5 3.5 2.0 2.3 5345 chr3R 27862960 intron CG34353 - chr3R 27865632 intron CG34353 - chr3R 27868305 intron CG34353 - chr3R_7_27865001 chr3R_27865001 RAL-383 2407 chr3R 27875685 27875727 chr3R 27882760 27882797 297 14 7074 3.5 5.0 4.2 2.7 7112 chr3R 27875685 intron CG34353 - chr3R 27879241 intron CG34353 - chr3R 27882797 intron CG34353 - chr3R_14_27875001 chr3R_27875001 RAL-383 2408 chr3R 27911228 27911256 chr3R 27911326 27911354 12 97 3.0 2.5 2.8 3.2 126 chr3R 27911228 intergenic not near genes chr3R 27911291 intergenic not near genes chr3R 27911354 intergenic not near genes chr3R_12_27910001 chr3R_27910001 RAL-383 2409 chr3R 28048205 28048246 chr3R 28048318 28048339 9 107 3.5 2.5 3.0 2.2 134 chr3R 28048205 intron CG34362 + chr3R 28048272 intron CG34362 + chr3R 28048339 intron CG34362 + chr3R_9_28045001 chr3R_28045001 RAL-383 2410 chr3R 28054442 28054472 chr3R 28054526 28054563 13 91 4.0 4.0 4.0 2.6 121 chr3R 28054442 intron CG34362 + chr3R 28054502 intron CG34362 + chr3R 28054563 intron CG34362 + chr3R_13_28050001 chr3R_28050001 RAL-383 2411 chr3R 28068476 28068526 chr3R 28073938 28073974 I-element 5 5457 0.5 0.5 0.5 3.3 5498 chr3R 28068476 intron CG34362 + chr3R 28071225 intron CG34362 + chr3R 28073974 intron CG34362 + chr3R_5_28070001 chr3R_28070001 RAL-383 2412 chr3R 28155994 28156048 chr3R 28156351 28156406 12 355 0.5 0.5 0.5 8.0 412 chr3R 28155994 intron CG34354 + chr3R 28156200 intron CG34354 + chr3R 28156406 intron CG34354 + chr3R_12_28155001 chr3R_28155001 RAL-383 2413 chr3R 28173654 28173696 chr3R 28181104 28181146 mdg1 12 7449 4.5 7.0 5.8 1.8 7492 chr3R 28173654 intron CG34354 + chr3R 28177400 intron CG34354 + chr3R 28181146 intron CG34354 + chr3R_12_28175001 chr3R_28175001 RAL-383 2414 chr3R 28219204 28219237 chr3R 28219313 28219345 6 107 3.5 1.0 2.2 1.9 141 chr3R 28219204 intron CG34354 + chr3R 28219274 intron CG34354 + chr3R 28219345 intron CG34354 + chr3R_6_28215001 chr3R_28215001 RAL-383 2415 chr3R 28227611 28227660 chr3R 28227740 28227789 13 129 3.5 3.0 3.2 3.1 178 chr3R 28227611 intron CG34354 + chr3R 28227700 intron CG34354 + chr3R 28227789 intron CG34354 + chr3R_13_28225001 chr3R_28225001 RAL-383 2416 chr3R 28253326 28253364 chr3R 28255851 28255894 jockey 8 2528 3.5 2.0 2.8 2.1 2568 chr3R 28253326 intergenic not near genes chr3R 28254610 intergenic not near genes chr3R 28255894 intergenic not near genes chr3R_8_28250001 chr3R_28250001 RAL-383 2417 chr3R 28302085 28302130 chr3R 28302544 28302589 jockey 19 456 5.5 8.5 7.0 2.4 504 chr3R 28302085 intergenic not near genes chr3R 28302337 intergenic not near genes chr3R 28302589 intergenic not near genes chr3R_19_28300001 chr3R_28300001 RAL-383 2418 chr3R 28304614 28304635 chr3R 28304720 28304742 6 107 6.0 5.0 5.5 0.9 128 chr3R 28304614 intergenic CG12516 - chr3R 28304678 intergenic CG12516 - chr3R 28304742 intergenic CG12516 - chr3R_6_28300001 chr3R_28300001 RAL-383 2419 chr3R 28337672 28337723 chr3R 28337779 28337828 13 103 8.5 1.5 5.0 2.2 156 chr3R 28337672 intron Gfat2 - chr3R 28337750 intron Gfat2 - chr3R 28337828 intron Gfat2 - chr3R_13_28335001 chr3R_28335001 RAL-383 2420 chr3R 28352492 28352531 chr3R 28352852 28352852 15 355 3.0 3.0 3.0 3.8 360 chr3R 28352492 exon Or98b + chr3R 28352672 exon Or98b + chr3R 28352852 exon Or98b + chr3R_15_28350001 chr3R_28350001 RAL-383 2421 chr3R 28371949 28371996 chr3R 28372614 28372661 8 658 1.5 3.0 2.2 2.5 712 chr3R 28371949 intergenic not near genes chr3R 28372305 intergenic not near genes chr3R 28372661 intergenic not near genes chr3R_8_28370001 chr3R_28370001 RAL-383 2422 chr3R 28380796 28380813 chr3R 28381039 28381048 4 244 2.0 5.0 3.5 0.9 252 chr3R 28380796 intergenic not near genes chr3R 28380922 intergenic not near genes chr3R 28381048 intergenic not near genes chr3R_4_28380001 chr3R_28380001 RAL-383 2423 chr3R 28380814 28380826 chr3R 28381029 28381060 5 223 1.0 4.0 2.5 1.4 246 chr3R 28380814 intergenic not near genes chr3R 28380937 intergenic not near genes chr3R 28381060 intergenic not near genes chr3R_5_28380001 chr3R_28380001 RAL-383 2424 chr3R 28393680 28393730 chr3R 28393800 28393822 9 117 1.0 3.5 2.2 2.8 142 chr3R 28393680 intergenic not near genes chr3R 28393751 intergenic not near genes chr3R 28393822 intergenic not near genes chr3R_9_28390001 chr3R_28390001 RAL-383 2425 chr3R 28411097 28411141 chr3R 28411193 28411237 18 96 2.0 2.0 2.0 6.0 140 chr3R 28411097 intergenic not near genes chr3R 28411167 intergenic not near genes chr3R 28411237 intergenic not near genes chr3R_18_28410001 chr3R_28410001 RAL-383 2426 chr3R 28425175 28425221 chr3R 28425263 28425285 8 86 1.5 1.5 1.5 3.2 110 chr3R 28425175 intron beat-VI + chr3R 28425230 intron beat-VI + chr3R 28425285 intron beat-VI + chr3R_8_28425001 chr3R_28425001 RAL-383 2427 chr3R 28478473 28478517 chr3R 28478569 28478613 9 90 2.0 1.5 1.8 3.2 140 chr3R 28478473 intergenic not near genes chr3R 28478543 intergenic not near genes chr3R 28478613 intergenic not near genes chr3R_9_28475001 chr3R_28475001 RAL-383 2428 chr3R 28599357 28599409 chr3R 28599524 28599550 12 164 1.5 2.5 2.0 4.0 193 chr3R 28599357 intergenic Noa36 - chr3R 28599454 intergenic Noa36 - chr3R 28599550 intergenic Noa36 - chr3R_12_28595001 chr3R_28595001 RAL-383 2429 chr3R 28626198 28626225 chr3R 28626293 28626300 9 100 1.5 2.5 2.0 3.0 102 chr3R 28626198 intron CG10011 - chr3R 28626249 intron CG10011 - chr3R 28626300 intron CG10011 - chr3R_9_28625001 chr3R_28625001 RAL-383 2430 chr3R 28758266 28758292 chr3R 28763903 28763909 roo 8 5634 5.0 0.0 2.5 2.3 5643 chr3R 28758266 intergenic aqrs - chr3R 28761088 intergenic not near genes chr3R 28763909 intergenic not near genes chr3R_8_28760001 chr3R_28760001 RAL-383 2431 chr3R 28763901 28763914 chr3R 28771364 28771377 Stalker4 8 7463 0.0 0.0 0.0 8.0 7476 chr3R 28763901 intergenic not near genes chr3R 28767639 intergenic not near genes chr3R 28771377 intergenic not near genes chr3R_8_28765001 chr3R_28765001 RAL-383 2432 chr3R 28811573 28811604 chr3R 28811739 28811770 8 166 1.5 6.0 3.8 1.7 197 chr3R 28811573 intergenic wdn - chr3R 28811672 intergenic wdn -,CG1646 + chr3R 28811770 intergenic CG1646 +,wdn - chr3R_8_28810001 chr3R_28810001 RAL-383 2433 chr3R 21907534 21907537 chr3R 28831799 28831802 93 6924266 22.0 8.5 15.2 5.7 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_93_25365001 chr3R_25365001 RAL-383 2434 chr3R 28985048 28985086 chr3R 28985170 28985210 5 124 2.5 2.5 2.5 1.4 162 chr3R 28985048 intergenic not near genes chr3R 28985129 intergenic not near genes chr3R 28985210 intergenic not near genes chr3R_5_28985001 chr3R_28985001 RAL-383 2435 chr3R 21907534 21907536 chr3R 29013340 29013340 11 7105805 22.0 20.5 21.2 0.5 7105806 chr3R 21907534 intergenic CG6678 + chr3R 25460437 intron Fur1 - chr3R 29013340 intron wat - chr3R_11_25460001 chr3R_25460001 RAL-383 2436 chr3R 29047323 29047369 chr3R 29047422 29047468 12 98 1.5 3.5 2.5 3.4 145 chr3R 29047323 3` UTR Pkc98E + chr3R 29047396 3` UTR Pkc98E + chr3R 29047468 3` UTR Pkc98E + chr3R_12_29045001 chr3R_29045001 RAL-383 2437 chr3R 29070041 29070080 chr3R 29070142 29070181 14 101 3.0 6.0 4.5 2.5 140 chr3R 29070041 intron CG11873 + chr3R 29070111 intron CG11873 + chr3R 29070181 intron CG11873 + chr3R_14_29070001 chr3R_29070001 RAL-383 2438 chr3R 29079383 29079409 chr3R 29080775 29080801 NOF 15 1389 0.0 4.5 2.2 4.7 1418 chr3R 29079383 intron CG11873 + chr3R 29080092 intron CG11873 + chr3R 29080801 intron CG11873 + chr3R_15_29080001 chr3R_29080001 RAL-383 2439 chr3R 29151935 29151964 chr3R 29152038 29152075 5 110 0.0 4.0 2.0 1.7 140 chr3R 29151935 intergenic Slbp -,ligatin - chr3R 29152005 intergenic Slbp -,ligatin - chr3R 29152075 3` UTR Slbp - chr3R_5_29150001 chr3R_29150001 RAL-383 2440 chr3R 29213039 29213093 chr3R 29213142 29213177 21 101 4.0 3.0 3.5 4.7 138 chr3R 29213039 intergenic not near genes chr3R 29213108 intergenic not near genes chr3R 29213177 intergenic not near genes chr3R_21_29210001 chr3R_29210001 RAL-383 2441 chr3R 29237254 29237277 chr3R 29239270 29239317 7 2029 17.0 5.5 11.2 0.6 2063 chr3R 29237254 exon CG11951 - chr3R 29238286 intron CG11951 - chr3R 29239317 exon CG31427 - chr3R_7_29235001 chr3R_29235001 RAL-383 2442 chr3R 29240451 29240504 chr3R 29240555 29240608 15 103 2.5 1.5 2.0 5.0 157 chr3R 29240451 intergenic CG31427 -,CG31445 - chr3R 29240530 intergenic CG31445 -,CG31427 - chr3R 29240608 3` UTR CG31445 - chr3R_15_29240001 chr3R_29240001 RAL-383 2443 chr3R 29256253 29256297 chr3R 29256353 29256385 7 92 4.5 1.5 3.0 1.8 132 chr3R 29256253 intergenic CG45544 +,stg - chr3R 29256319 intergenic CG45544 + chr3R 29256385 intergenic CG45544 + chr3R_7_29255001 chr3R_29255001 RAL-383 2444 chr3R 29274321 29274335 chr3R 29274392 29274436 5 92 1.5 2.0 1.8 1.8 115 chr3R 29274321 intergenic not near genes chr3R 29274378 intergenic not near genes chr3R 29274436 intergenic not near genes chr3R_5_29270001 chr3R_29270001 RAL-383 2445 chr3R 29281689 29281732 chr3R 29281789 29281833 7 100 3.0 5.5 4.2 1.3 144 chr3R 29281689 intergenic not near genes chr3R 29281761 intergenic not near genes chr3R 29281833 intergenic not near genes chr3R_7_29280001 chr3R_29280001 RAL-383 2446 chr3R 29319808 29319862 chr3R 29320147 29320164 jockey 13 336 3.5 4.5 4.0 2.6 356 chr3R 29319808 intergenic Cnx99A - chr3R 29319986 intergenic Cnx99A - chr3R 29320164 intergenic not near genes chr3R_13_29315001 chr3R_29315001 RAL-383 2447 chr3R 29335394 29335418 chr3R 29335531 29335577 13 153 0.5 4.5 2.5 3.7 183 chr3R 29335394 intergenic not near genes chr3R 29335486 intergenic not near genes chr3R 29335577 intergenic not near genes chr3R_13_29335001 chr3R_29335001 RAL-383 2448 chr3R 29351734 29351746 chr3R 29351839 29351851 4 104 6.0 8.5 7.2 0.5 117 chr3R 29351734 intergenic not near genes chr3R 29351792 intergenic not near genes chr3R 29351851 intergenic not near genes chr3R_4_29350001 chr3R_29350001 RAL-383 2449 chr3R 29355942 29355989 chr3R 29356040 29356089 15 99 6.0 2.0 4.0 3.0 147 chr3R 29355942 intergenic CR45547 - chr3R 29356016 intergenic CR45547 - chr3R 29356089 intergenic CR45547 - chr3R_15_29355001 chr3R_29355001 RAL-383 2450 chr3R 29406624 29406637 chr3R 29407899 29407943 jockey 4 1297 3.5 4.0 3.8 0.8 1319 chr3R 29406624 intron Ptp99A + chr3R 29407284 intron Ptp99A + chr3R 29407943 intron Ptp99A + chr3R_4_29405001 chr3R_29405001 RAL-383 2451 chr3R 29471993 29472040 chr3R 29472106 29472130 13 108 1.5 3.0 2.2 4.1 137 chr3R 29471993 intron Ptp99A + chr3R 29472062 intron Ptp99A + chr3R 29472130 intron Ptp99A + chr3R_13_29470001 chr3R_29470001 RAL-383 2452 chr3R 29474421 29474427 chr3R 29474528 29474533 5 107 7.5 7.0 7.2 0.6 112 chr3R 29474421 intron Ptp99A + chr3R 29474477 intron Ptp99A + chr3R 29474533 intron Ptp99A + chr3R_5_29470001 chr3R_29470001 RAL-383 2453 chr3R 29474432 29474461 chr3R 29474523 29474568 9 105 3.0 5.5 4.2 1.7 136 chr3R 29474432 intron Ptp99A + chr3R 29474500 intron Ptp99A + chr3R 29474568 intron Ptp99A + chr3R_9_29470001 chr3R_29470001 RAL-383 2454 chr3R 29505874 29505923 chr3R 29505971 29506020 12 96 3.5 5.5 4.5 2.2 146 chr3R 29505874 intergenic not near genes chr3R 29505947 intergenic not near genes chr3R 29506020 intergenic not near genes chr3R_12_29505001 chr3R_29505001 RAL-383 2455 chr3R 29655638 29655673 chr3R 29655732 29655772 13 98 1.5 1.0 1.2 5.9 134 chr3R 29655638 intron Dop1R2 - chr3R 29655705 intron Dop1R2 - chr3R 29655772 intron Dop1R2 - chr3R_13_29655001 chr3R_29655001 RAL-383 2456 chr3R 29714815 29714844 chr3R 29715041 29715090 6 229 6.0 9.0 7.5 0.7 275 chr3R 29714815 exon Obp99d + chr3R 29714952 3` UTR Obp99d + chr3R 29715090 3` UTR Dup99B - chr3R_6_29710001 chr3R_29710001 RAL-383 2457 chr3R 29714862 29714895 chr3R 29715027 29715059 7 162 3.0 5.5 4.2 1.3 197 chr3R 29714862 exon Obp99d + chr3R 29714960 3` UTR Obp99d + chr3R 29715059 intergenic Dup99B -,Obp99d + chr3R_7_29710001 chr3R_29710001 RAL-383 2458 chr3R 29719381 29719431 chr3R 29719487 29719537 16 104 2.0 8.0 5.0 2.7 156 chr3R 29719381 intron CG15506 + chr3R 29719459 intron CG15506 + chr3R 29719537 intron CG15506 + chr3R_16_29715001 chr3R_29715001 RAL-383 2459 chr3R 29738244 29738285 chr3R 29739731 29739736 hobo 11 1480 1.5 3.0 2.2 3.4 1492 chr3R 29738244 intergenic CG1969 +,CG7598 + chr3R 29738990 intron CG1969 + chr3R 29739736 5` UTR CG1969 + chr3R_11_29735001 chr3R_29735001 RAL-383 2460 chr3R 29758927 29758947 chr3R 29759023 29759045 7 95 6.0 9.0 7.5 0.8 118 chr3R 29758927 3` UTR CR44953 - chr3R 29758986 3` UTR CR44953 - chr3R 29759045 intergenic CR44953 - chr3R_7_29755001 chr3R_29755001 RAL-383 2461 chr3R 29758951 29758969 chr3R 29759020 29759067 7 92 5.0 7.5 6.2 1.0 116 chr3R 29758951 3` UTR CR44953 - chr3R 29759009 3` UTR CR44953 - chr3R 29759067 intergenic CR44953 - chr3R_7_29755001 chr3R_29755001 RAL-383 2462 chr3R 29760342 29760393 chr3R 29761563 29761614 pogo 15 1218 3.0 2.5 2.8 3.9 1272 chr3R 29760342 intergenic not near genes chr3R 29760978 intergenic not near genes chr3R 29761614 intergenic not near genes chr3R_15_29760001 chr3R_29760001 RAL-383 2463 chr3R 29775749 29775801 chr3R 29775886 29775940 15 138 3.5 5.5 4.5 2.7 191 chr3R 29775749 intron kay + chr3R 29775844 intron kay + chr3R 29775940 intron kay + chr3R_15_29775001 chr3R_29775001 RAL-383 2464 chr3R 29882000 29882014 chr3R 29891177 29891191 roo 7 9177 12.5 3.0 7.8 0.8 9191 chr3R 29882000 intron CG31038 + chr3R 29886596 intron CG31038 + chr3R 29891191 intron CG31038 + chr3R_7_29885001 chr3R_29885001 RAL-383 2465 chr3R 29882016 29882053 chr3R 29891176 29891222 roo 14 9174 4.5 3.0 3.8 2.9 9206 chr3R 29882016 intron CG31038 + chr3R 29886619 intron CG31038 + chr3R 29891222 intron CG31038 + chr3R_14_29885001 chr3R_29885001 RAL-383 2466 chr3R 29966061 29966073 chr3R 29966142 29966142 4 86 1.0 5.5 3.2 1.0 81 chr3R 29966061 intron TkR99D - chr3R 29966102 intron TkR99D - chr3R 29966142 intron TkR99D - chr3R_4_29965001 chr3R_29965001 RAL-383 2467 chr3R 30013666 30013687 chr3R 30013768 30013790 5 102 6.5 6.5 6.5 0.7 124 chr3R 30013666 intron CG7920 - chr3R 30013728 intron CG7920 - chr3R 30013790 intron CG7920 - chr3R_5_30010001 chr3R_30010001 RAL-383 2468 chr3R 30061835 30061857 chr3R 30061915 30061955 5 93 5.5 0.0 2.8 1.3 120 chr3R 30061835 intron sima + chr3R 30061895 intron sima + chr3R 30061955 intron sima + chr3R_5_30060001 chr3R_30060001 RAL-383 2469 chr3R 30082988 30083014 chr3R 30083084 30083110 4 96 2.5 2.5 2.5 1.1 122 chr3R 30082988 intron sima + chr3R 30083049 intron sima + chr3R 30083110 intron sima + chr3R_4_30080001 chr3R_30080001 RAL-383 2470 chr3R 30084850 30084882 chr3R 30086316 30086347 hobo 8 1476 2.5 4.0 3.2 1.9 1497 chr3R 30084850 intron sima + chr3R 30085598 intron sima + chr3R 30086347 intron sima + chr3R_8_30085001 chr3R_30085001 RAL-383 2471 chr3R 30175677 30175721 chr3R 30175783 30175827 12 106 5.0 4.5 4.8 2.1 150 chr3R 30175677 intergenic CG1983 - chr3R 30175752 intergenic CG1983 - chr3R 30175827 3` UTR CG1983 - chr3R_12_30175001 chr3R_30175001 RAL-383 2472 chr3R 30210594 30210673 chr3R 30210727 30210773 9 105 0.0 4.0 2.0 3.0 179 chr3R 30210594 intergenic Anp +,CecA1 + chr3R 30210684 intergenic CecA1 +,Anp + chr3R 30210773 intergenic CecA1 +,Anp + chr3R_9_30210001 chr3R_30210001 RAL-383 2473 chr3R 30224628 30224672 chr3R 30224726 30224770 5 98 4.5 2.5 3.5 1.1 142 chr3R 30224628 intergenic not near genes chr3R 30224699 intergenic not near genes chr3R 30224770 intergenic not near genes chr3R_5_30220001 chr3R_30220001 RAL-383 2474 chr3R 30238742 30238796 chr3R 30239926 30239980 1360 24 1182 2.0 5.5 3.8 5.0 1238 chr3R 30238742 intergenic not near genes chr3R 30239361 intergenic not near genes chr3R 30239980 intergenic not near genes chr3R_24_30235001 chr3R_30235001 RAL-383 2475 chr3R 30317344 30317350 chr3R 30324919 30324962 roo 4 7596 0.5 5.0 2.8 1.1 7618 chr3R 30317344 intron hdc + chr3R 30321153 intron hdc + chr3R 30324962 intron hdc + chr3R_4_30320001 chr3R_30320001 RAL-383 2476 chr3R 30396197 30396242 chr3R 30404483 30404528 roo 7 8282 4.0 3.5 3.8 1.5 8331 chr3R 30396197 intergenic not near genes chr3R 30400362 intergenic not near genes chr3R 30404528 5` UTR CR45570 + chr3R_7_30400001 chr3R_30400001 RAL-383 2477 chr3R 30438414 30438460 chr3R 30438511 30438557 9 93 1.0 1.0 1.0 4.5 143 chr3R 30438414 intron CG15537 - chr3R 30438486 intron CG15537 - chr3R 30438557 intron CG15537 - chr3R_9_30435001 chr3R_30435001 RAL-383 2478 chr3R 30448174 30448209 chr3R 30448273 30448308 12 98 6.5 3.0 4.8 2.1 134 chr3R 30448174 intron aralar1 - chr3R 30448241 intron aralar1 - chr3R 30448308 intron aralar1 - chr3R_12_30445001 chr3R_30445001 RAL-383 2479 chr3R 30451883 30451916 chr3R 30452091 30452118 8 206 4.5 2.0 3.2 1.9 235 chr3R 30451883 intron aralar1 - chr3R 30452000 intron aralar1 - chr3R 30452118 intron aralar1 - chr3R_8_30450001 chr3R_30450001 RAL-383 2480 chr3R 30456384 30456422 chr3R 30456485 30456512 11 98 3.0 8.5 5.8 1.6 128 chr3R 30456384 intergenic CG2224 - chr3R 30456448 3` UTR CG2224 - chr3R 30456512 3` UTR CG2224 - chr3R_11_30455001 chr3R_30455001 RAL-383 2481 chr3R 30466681 30466728 chr3R 30466781 30466826 11 100 2.5 3.5 3.0 2.8 145 chr3R 30466681 intron PH4alphaEFB + chr3R 30466754 intron PH4alphaEFB + chr3R 30466826 intron PH4alphaEFB + chr3R_11_30465001 chr3R_30465001 RAL-383 2482 chr3R 30480470 30480512 chr3R 30482940 30482965 jockey 11 2479 2.0 4.0 3.0 2.8 2495 chr3R 30480470 intron PH4alphaEFB + chr3R 30481718 intron PH4alphaEFB + chr3R 30482965 intron PH4alphaEFB + chr3R_11_30480001 chr3R_30480001 RAL-383 2483 chr3R 30485020 30485069 chr3R 30485116 30485165 19 95 4.0 4.0 4.0 3.8 145 chr3R 30485020 intron PH4alphaEFB + chr3R 30485092 intron PH4alphaEFB + chr3R 30485165 intron PH4alphaEFB + chr3R_19_30485001 chr3R_30485001 RAL-383 2484 chr3R 30548995 30549034 chr3R 30549107 30549146 13 110 5.0 4.5 4.8 2.2 151 chr3R 30548995 intron tmod + chr3R 30549070 intron tmod + chr3R 30549146 intron tmod + chr3R_13_30545001 chr3R_30545001 RAL-383 2485 chr3R 30571681 30571722 chr3R 30571781 30571822 6 100 0.5 1.0 0.8 3.3 141 chr3R 30571681 intron tmod + chr3R 30571752 intron tmod + chr3R 30571822 exon tmod + chr3R_6_30570001 chr3R_30570001 RAL-383 2486 chr3R 30679509 30679549 chr3R 30686986 30687036 blood 6 7482 5.0 5.5 5.2 1.0 7527 chr3R 30679509 intergenic not near genes chr3R 30683272 intergenic not near genes chr3R 30687036 intergenic not near genes chr3R_6_30680001 chr3R_30680001 RAL-383 2487 chr3R 30747526 30747561 chr3R 30747622 30747634 7 93 1.5 0.5 1.0 3.5 108 chr3R 30747526 intergenic CR43238 - chr3R 30747580 intergenic CR43238 - chr3R 30747634 intergenic CR43238 - chr3R_7_30745001 chr3R_30745001 RAL-383 2488 chr3R 30818801 30818830 chr3R 30820386 30820415 1360 8 1585 6.5 0.5 3.5 1.8 1614 chr3R 30818801 intron cindr + chr3R 30819608 intron cindr + chr3R 30820415 intron cindr + chr3R_8_30815001 chr3R_30815001 RAL-383 2489 chr3R 30830546 30830563 chr3R 30830649 30830666 4 102 10.5 3.5 7.0 0.5 120 chr3R 30830546 intron CG15544 + chr3R 30830606 intron CG15544 + chr3R 30830666 intron CG15544 + chr3R_4_30830001 chr3R_30830001 RAL-383 2490 chr3R 30830574 30830597 chr3R 30830642 30830679 7 78 3.5 3.0 3.2 1.7 105 chr3R 30830574 intron CG15544 + chr3R 30830626 intron CG15544 + chr3R 30830679 intron CG15544 + chr3R_7_30830001 chr3R_30830001 RAL-383 2491 chr3R 30850137 30850270 chr3R 30850243 30850382 30 109 0.5 0.5 0.5 20.0 245 chr3R 30850137 intergenic not near genes chr3R 30850260 intergenic not near genes chr3R 30850382 intergenic not near genes chr3R_30_30850001 chr3R_30850001 RAL-383 2492 chr3R 30859386 30859426 chr3R 30859484 30859524 12 98 3.0 4.5 3.8 2.5 138 chr3R 30859386 intergenic not near genes chr3R 30859455 intergenic not near genes chr3R 30859524 intergenic not near genes chr3R_12_30855001 chr3R_30855001 RAL-383 2493 chr3R 30973128 30973150 chr3R 30973298 30973319 7 177 3.5 3.0 3.2 1.7 191 chr3R 30973128 intron 5-HT7 - chr3R 30973224 intron 5-HT7 - chr3R 30973319 intron 5-HT7 - chr3R_7_30970001 chr3R_30970001 RAL-383 2494 chr3R 30982113 30982147 chr3R 30982208 30982228 11 96 3.0 4.5 3.8 2.3 115 chr3R 30982113 intron 5-HT7 - chr3R 30982170 intron 5-HT7 - chr3R 30982228 intron 5-HT7 - chr3R_11_30980001 chr3R_30980001 RAL-383 2495 chr3R 30987838 30987873 chr3R 30987964 30987992 5 128 7.5 3.0 5.2 0.8 154 chr3R 30987838 intron 5-HT7 - chr3R 30987915 intron 5-HT7 - chr3R 30987992 intron 5-HT7 - chr3R_5_30985001 chr3R_30985001 RAL-383 2496 chr3R 31042092 31042100 chr3R 31042199 31042207 7 107 7.0 2.0 4.5 1.3 115 chr3R 31042092 intron CanA1 + chr3R 31042150 intron CanA1 + chr3R 31042207 intron CanA1 + chr3R_7_31040001 chr3R_31040001 RAL-383 2497 chr3R 31042108 31042142 chr3R 31042198 31042249 9 102 2.5 2.0 2.2 2.8 141 chr3R 31042108 intron CanA1 + chr3R 31042178 intron CanA1 + chr3R 31042249 intron CanA1 + chr3R_9_31040001 chr3R_31040001 RAL-383 2498 chr3R 31074210 31074252 chr3R 31081829 31081832 springer 13 7616 6.0 3.0 4.5 2.4 7622 chr3R 31074210 intron Sox100B + chr3R 31078021 intron Sox100B + chr3R 31081832 intron Sox100B + chr3R_13_31075001 chr3R_31075001 RAL-383 2499 chr3R 31135116 31135162 chr3R 31135244 31135262 21 126 2.0 3.0 2.5 6.0 146 chr3R 31135116 intron Gycbeta100B + chr3R 31135189 intron Gycbeta100B + chr3R 31135262 intron Gycbeta100B + chr3R_21_31135001 chr3R_31135001 RAL-383 2500 chr3R 31163276 31163316 chr3R 31163388 31163427 4 108 3.0 1.0 2.0 1.3 151 chr3R 31163276 intron,intron Gycbeta100B +,stops - chr3R 31163352 intron,intron Gycbeta100B +,stops - chr3R 31163427 intron,intron Gycbeta100B +,stops - chr3R_4_31160001 chr3R_31160001 RAL-383 2501 chr3R 31186526 31186572 chr3R 31186622 31186668 10 92 2.0 4.0 3.0 2.5 142 chr3R 31186526 intron mesh - chr3R 31186597 intron mesh - chr3R 31186668 intron mesh - chr3R_10_31185001 chr3R_31185001 RAL-383 2502 chr3R 31197120 31197147 chr3R 31197581 31197613 9 469 4.5 2.0 3.2 2.1 493 chr3R 31197120 exon CG1544 + chr3R 31197366 intron CG1544 + chr3R 31197613 intron CG1544 + chr3R_9_31195001 chr3R_31195001 RAL-383 2503 chr3R 31260235 31260273 chr3R 31260321 31260370 18 93 7.5 4.0 5.8 2.6 135 chr3R 31260235 intergenic CG18672 +,CG3669 + chr3R 31260302 5` UTR CG18672 + chr3R 31260370 5` UTR CG18672 + chr3R_18_31260001 chr3R_31260001 RAL-383 2504 chr3R 31279372 31279407 chr3R 31285563 31285612 diver 16 6200 5.0 2.5 3.8 3.3 6240 chr3R 31279372 intergenic not near genes chr3R 31282492 intergenic not near genes chr3R 31285612 intergenic not near genes chr3R_16_31280001 chr3R_31280001 RAL-383 2505 chr3R 31354823 31354877 chr3R 31354923 31354977 13 100 3.0 3.0 3.0 3.2 154 chr3R 31354823 intron CG34347 + chr3R 31354900 intron CG34347 + chr3R 31354977 intron CG34347 + chr3R_13_31350001 chr3R_31350001 RAL-383 2506 chr3R 31413083 31413115 chr3R 31418287 31418327 copia 9 5212 2.5 1.5 2.0 3.0 5244 chr3R 31413083 intron Gprk2 + chr3R 31415705 intron Gprk2 + chr3R 31418327 intron Gprk2 + chr3R_9_31415001 chr3R_31415001 RAL-383 2507 chr3R 31426866 31426885 chr3R 31426978 31426997 9 112 7.5 7.0 7.2 1.1 131 chr3R 31426866 intron Gprk2 + chr3R 31426932 intron Gprk2 + chr3R 31426997 intron Gprk2 + chr3R_9_31425001 chr3R_31425001 RAL-383 2508 chr3R 31426886 31426910 chr3R 31426968 31427022 7 108 5.0 4.0 4.5 1.3 136 chr3R 31426886 intron Gprk2 + chr3R 31426954 intron Gprk2 + chr3R 31427022 intron Gprk2 + chr3R_7_31425001 chr3R_31425001 RAL-383 2509 chr3R 31431097 31431133 chr3R 31431195 31431223 8 94 2.0 5.0 3.5 1.8 126 chr3R 31431097 intron Gprk2 + chr3R 31431160 intron Gprk2 + chr3R 31431223 intron Gprk2 + chr3R_8_31430001 chr3R_31430001 RAL-383 2510 chr3R 31442250 31442291 chr3R 31442355 31442394 10 101 3.5 2.5 3.0 2.5 144 chr3R 31442250 intron Gprk2 + chr3R 31442322 intron Gprk2 + chr3R 31442394 intron Gprk2 + chr3R_10_31440001 chr3R_31440001 RAL-383 2511 chr3R 31530827 31530846 chr3R 31531143 31531192 5 336 4.0 2.0 3.0 1.2 365 chr3R 31530827 intergenic not near genes chr3R 31531010 intergenic not near genes chr3R 31531192 intergenic not near genes chr3R_5_31530001 chr3R_31530001 RAL-383 2512 chr3R 31599768 31599811 chr3R 31599871 31599911 15 100 1.5 2.0 1.8 5.4 143 chr3R 31599768 intron CycG - chr3R 31599840 intron CycG - chr3R 31599911 intron CycG - chr3R_15_31595001 chr3R_31595001 RAL-383 2513 chr3R 31691513 31691564 chr3R 31696299 31696350 Doc 10 4782 5.0 4.0 4.5 1.8 4837 chr3R 31691513 intergenic not near genes chr3R 31693932 intergenic not near genes chr3R 31696350 intergenic not near genes chr3R_10_31690001 chr3R_31690001 RAL-383 2514 chr3R 31774857 31774895 chr3R 31775022 31775060 11 161 3.5 5.5 4.5 2.0 203 chr3R 31774857 3` UTR sip3 + chr3R 31774958 3` UTR sip3 + chr3R 31775060 3` UTR,3` UTR sip3 +,CG2126 - chr3R_11_31770001 chr3R_31770001 RAL-383 2515 chr3R 31930862 31930904 chr3R 31930982 31931022 8 117 2.5 2.0 2.2 2.5 160 chr3R 31930862 intron heph - chr3R 31930942 intron heph - chr3R 31931022 intron heph - chr3R_8_31930001 chr3R_31930001 RAL-383 2516 chr3R 31931173 31931214 chr3R 31931276 31931317 17 103 5.0 2.5 3.8 3.5 144 chr3R 31931173 intron heph - chr3R 31931245 intron heph - chr3R 31931317 intron heph - chr3R_17_31930001 chr3R_31930001 RAL-383 2517 chr3R 31945182 31945232 chr3R 31945278 31945328 18 96 6.0 4.5 5.2 2.9 146 chr3R 31945182 intron heph - chr3R 31945255 intron heph - chr3R 31945328 intron heph - chr3R_18_31945001 chr3R_31945001 RAL-383 2518 chr3R 31997976 31998023 chr3R 32005466 32005493 blood 7 7485 2.5 3.5 3.0 1.8 7517 chr3R 31997976 intron heph - chr3R 32001734 intron heph - chr3R 32005493 intron heph - chr3R_7_32000001 chr3R_32000001 RAL-383 2519 chr4 73640 73683 chr4 73734 73782 9 93 5.5 2.5 4.0 1.8 142 chr4 73640 intron pan + chr4 73711 intron pan + chr4 73782 intron pan + chr4_9_70001 chr4_70001 RAL-383 2520 chr4 76482 76499 chr4 81945 81962 I-element 5 5463 5.5 4.5 5.0 0.8 5480 chr4 76482 intron pan + chr4 79222 intron pan + chr4 81962 intron pan + chr4_5_75001 chr4_75001 RAL-383 2521 chr4 319972 320002 chr4 328168 328192 Stalker2 4 8194 4.0 2.0 3.0 1.0 8220 chr4 319972 3` UTR CG32850 + chr4 324082 intron CG32850 + chr4 328192 3` UTR,3` UTR CG32850 +,PMCA - chr4_4_320001 chr4_320001 RAL-383 2522 chr4 447402 447445 chr4 447510 447543 9 107 3.5 1.5 2.5 2.6 141 chr4 447402 intron CaMKI + chr4 447472 intron CaMKI + chr4 447543 intron CaMKI + chr4_9_445001 chr4_445001 RAL-383 2523 chr4 671597 671636 chr4 680200 680231 Tirant 13 8601 5.0 9.0 7.0 1.6 8634 chr4 671597 intron CG11360 + chr4 675914 intron CG11360 + chr4 680231 intron CG11360 + chr4_13_675001 chr4_675001 RAL-383 2524 chr4 743559 743575 chr4 743668 743684 5 109 6.5 3.0 4.8 0.9 125 chr4 743559 intron bt + chr4 743622 intron bt + chr4 743684 intron bt + chr4_5_740001 chr4_740001 RAL-383 2525 chr4 743580 743596 chr4 743665 743705 7 102 3.5 3.0 3.2 1.7 125 chr4 743580 intron bt + chr4 743642 intron bt + chr4 743705 intron bt + chr4_7_740001 chr4_740001 RAL-383 2526 chr4 904041 904077 chr4 904147 904183 18 105 5.5 3.0 4.2 3.5 142 chr4 904041 intron unc-13 - chr4 904112 intron unc-13 - chr4 904183 intron unc-13 - chr4_18_900001 chr4_900001 RAL-383 2527 chr4 959605 959650 chr4 959804 959849 11 199 3.0 5.0 4.0 2.2 244 chr4 959605 intergenic CR44030 +,CR45201 - chr4 959727 5` UTR CR44030 + chr4 959849 5` UTR CR44030 + chr4_11_955001 chr4_955001 RAL-383 2528 chr4 972477 972525 chr4 972579 972626 14 102 1.5 3.5 2.5 4.0 149 chr4 972477 intron fuss - chr4 972552 intron fuss - chr4 972626 intron fuss - chr4_14_970001 chr4_970001 RAL-383 2529 chrX 180281 180325 chrX 180383 180427 11 99 1.5 2.5 2.0 3.7 146 chrX 180281 intron tyn + chrX 180354 intron tyn + chrX 180427 intron tyn + chrX_11_180001 chrX_180001 RAL-383 2530 chrX 295838 295880 chrX 303477 303514 412 8 7639 2.5 5.5 4.0 1.6 7676 chrX 295838 intron CG3777 + chrX 299676 intron CG3777 + chrX 303514 intron CG3777 + chrX_8_295001 chrX_295001 RAL-383 2531 chrX 318459 318473 chrX 323565 323579 flea 7 5106 6.5 8.0 7.2 0.9 5120 chrX 318459 intron,intron CG3777 +,CG32816 - chrX 321019 intron,intron CG3777 +,CG32816 - chrX 323579 intron,intron CG3777 +,CG32816 - chrX_7_320001 chrX_320001 RAL-383 2532 chrX 318474 318491 chrX 323564 323597 flea 6 5103 5.0 8.0 6.5 0.8 5123 chrX 318474 intron,intron CG3777 +,CG32816 - chrX 321036 intron,intron CG3777 +,CG32816 - chrX 323597 intron,intron CG3777 +,CG32816 - chrX_6_320001 chrX_320001 RAL-383 2533 chrX 428403 428448 chrX 434601 434653 3S18 20 6203 6.5 1.0 3.8 4.2 6250 chrX 428403 intron CG32816 - chrX 431528 intron CG32816 - chrX 434653 intron CG32816 - chrX_20_430001 chrX_430001 RAL-383 2534 chrX 551414 551454 chrX 558996 559034 412 6 7576 3.0 4.0 3.5 1.3 7620 chrX 551414 intron Appl + chrX 555224 intron Appl + chrX 559034 intron Appl + chrX_6_555001 chrX_555001 RAL-383 2535 chrX 609865 609912 chrX 609977 610024 15 107 6.0 1.0 3.5 3.3 159 chrX 609865 intron CG13366 - chrX 609944 intron CG13366 - chrX 610024 intron CG13366 - chrX_15_605001 chrX_605001 RAL-383 2536 chrX 732711 732761 chrX 736290 736321 12 3569 13.5 18.5 16.0 0.7 3610 chrX 732711 intron sdk + chrX 734516 intron sdk + chrX 736321 intron sdk + chrX_12_730001 chrX_730001 RAL-383 2537 chrX 802268 802321 chrX 802365 802407 8 94 4.0 3.5 3.8 1.7 139 chrX 802268 exon CG13359 - chrX 802338 exon CG13359 - chrX 802407 exon CG13359 - chrX_8_800001 chrX_800001 RAL-383 2538 chrX 812260 812293 chrX 817900 817944 297 8 5650 6.5 5.0 5.8 1.2 5684 chrX 812260 intron CG43867 - chrX 815102 intron CG43867 - chrX 817944 intron CG43867 - chrX_8_815001 chrX_815001 RAL-383 2539 chrX 827593 827633 chrX 835405 835445 roo 9 7812 4.0 6.5 5.2 1.5 7852 chrX 827593 intron CG43867 - chrX 831519 intron CG43867 - chrX 835445 intron CG43867 - chrX_9_830001 chrX_830001 RAL-383 2540 chrX 906685 906731 chrX 908493 908540 S-element 10 1806 2.0 14.5 8.2 1.1 1855 chrX 906685 intron CG43867 - chrX 907612 intron CG43867 - chrX 908540 intron CG43867 - chrX_10_905001 chrX_905001 RAL-383 2541 chrX 1051062 1051084 chrX 1051154 1051182 5 94 6.5 9.5 8.0 0.6 120 chrX 1051062 intron CR44779 + chrX 1051122 intron CR44779 + chrX 1051182 intron CR44779 + chrX_5_1050001 chrX_1050001 RAL-383 2542 chrX 1053120 1053120 chrX 16983076 16983077 4 15929956 14.5 9.0 11.8 0.3 15929957 chrX 1053120 intron CR44779 + chrX 9018098 intron,intron rdgA +,CR43836 - chrX 16983077 intron CG45002 - chrX_4_9015001 chrX_9015001 RAL-383 2543 chrX 1253716 1253759 chrX 1253818 1253846 7 98 1.0 2.5 1.8 2.5 130 chrX 1253716 intron Atf3 - chrX 1253781 intron Atf3 - chrX 1253846 intron Atf3 - chrX_7_1250001 chrX_1250001 RAL-383 2544 chrX 1357759 1357771 chrX 1367949 1367955 Doc 8 10189 9.0 3.0 6.0 1.1 10196 chrX 1357759 intergenic png - chrX 1362857 intergenic not near genes chrX 1367955 intergenic not near genes chrX_8_1360001 chrX_1360001 RAL-383 2545 chrX 1357783 1357805 chrX 1367943 1367995 Doc 6 10184 4.0 2.5 3.2 1.4 10212 chrX 1357783 intergenic png - chrX 1362889 intergenic not near genes chrX 1367995 intergenic not near genes chrX_6_1360001 chrX_1360001 RAL-383 2546 chrX 1428577 1428624 chrX 1428678 1428730 17 101 4.0 6.0 5.0 2.8 153 chrX 1428577 intron futsch + chrX 1428654 intron futsch + chrX 1428730 intron futsch + chrX_17_1425001 chrX_1425001 RAL-383 2547 chrX 1518031 1518042 chrX 1523446 1523464 jockey 6 5419 4.5 5.0 4.8 1.0 5433 chrX 1518031 intergenic inc + chrX 1520748 intergenic not near genes chrX 1523464 intergenic not near genes chrX_6_1520001 chrX_1520001 RAL-383 2548 chrX 1518045 1518063 chrX 1523442 1523485 jockey 6 5416 3.0 4.5 3.8 1.2 5440 chrX 1518045 intergenic inc + chrX 1520765 intergenic not near genes chrX 1523485 intergenic not near genes chrX_6_1520001 chrX_1520001 RAL-383 2549 chrX 1894186 1894222 chrX 1894295 1894318 11 109 3.5 3.0 3.2 2.6 132 chrX 1894186 intron arm - chrX 1894252 intron arm - chrX 1894318 intron arm - chrX_11_1890001 chrX_1890001 RAL-383 2550 chrX 1930518 1930566 chrX 1938109 1938157 opus 11 7590 5.0 4.5 4.8 1.9 7639 chrX 1930518 intergenic CG11596 + chrX 1934338 intergenic not near genes chrX 1938157 3` UTR CG3857 - chrX_11_1930001 chrX_1930001 RAL-383 2551 chrX 1982790 1982828 chrX 1982901 1982914 14 116 2.5 3.0 2.8 3.7 124 chrX 1982790 intron Hr4 + chrX 1982852 intron Hr4 + chrX 1982914 intron Hr4 + chrX_14_1980001 chrX_1980001 RAL-383 2552 chrX 2324345 2324395 chrX 2324444 2324496 7 101 1.5 2.0 1.8 2.5 151 chrX 2324345 intron phl + chrX 2324420 intron phl + chrX 2324496 intron phl + chrX_7_2320001 chrX_2320001 RAL-383 2553 chrX 2399855 2399866 chrX 2408188 2408201 roo 4 8338 0.5 1.0 0.8 2.2 8346 chrX 2399855 intergenic not near genes chrX 2404028 intergenic not near genes chrX 2408201 intergenic not near genes chrX_4_2400001 chrX_2400001 RAL-383 2554 chrX 2429650 2429657 chrX 2429751 2429758 5 101 0.0 4.5 2.2 1.6 108 chrX 2429650 intergenic not near genes chrX 2429704 intergenic not near genes chrX 2429758 intergenic not near genes chrX_5_2425001 chrX_2425001 RAL-383 2555 chrX 2535805 2535851 chrX 2535897 2535947 13 94 4.0 2.5 3.2 3.1 142 chrX 2535805 intron trol - chrX 2535876 intron trol - chrX 2535947 intron trol - chrX_13_2535001 chrX_2535001 RAL-383 2556 chrX 2578806 2578817 chrX 2578918 2578929 6 111 3.0 6.0 4.5 1.1 123 chrX 2578806 intergenic Pdfr +,Vha36-3 - chrX 2578868 intergenic Vha36-3 -,Pdfr + chrX 2578929 intergenic Vha36-3 -,Pdfr + chrX_6_2575001 chrX_2575001 RAL-383 2557 chrX 2578822 2578844 chrX 2578911 2578956 5 104 1.5 4.0 2.8 1.3 134 chrX 2578822 intergenic Pdfr +,Vha36-3 - chrX 2578889 intergenic Vha36-3 -,Pdfr + chrX 2578956 intergenic Vha36-3 -,Pdfr + chrX_5_2575001 chrX_2575001 RAL-383 2558 chrX 2844884 2844931 chrX 2852313 2852360 mdg1 11 7427 3.5 1.0 2.2 3.4 7476 chrX 2844884 intron kirre + chrX 2848622 intron kirre + chrX 2852360 intron kirre + chrX_11_2845001 chrX_2845001 RAL-383 2559 chrX 2859352 2859361 chrX 2860073 2860081 4 720 12.5 25.0 18.8 0.2 729 chrX 2859352 intron kirre + chrX 2859716 intron kirre + chrX 2860081 intron kirre + chrX_4_2855001 chrX_2855001 RAL-383 2560 chrX 3058008 3058051 chrX 3058269 3058312 pogo 8 261 3.5 2.0 2.8 2.1 304 chrX 3058008 intron kirre + chrX 3058160 intron kirre + chrX 3058312 intron kirre + chrX_8_3055001 chrX_3055001 RAL-383 2561 chrX 3075616 3075662 chrX 3080943 3080987 Transpac 9 5321 3.5 5.0 4.2 1.7 5371 chrX 3075616 intron kirre + chrX 3078302 intron kirre + chrX 3080987 intron kirre + chrX_9_3075001 chrX_3075001 RAL-383 2562 chrX 3203449 3203493 chrX 3203668 3203712 10 218 3.5 0.5 2.0 3.3 263 chrX 3203449 intron dnc + chrX 3203580 intron dnc + chrX 3203712 intron dnc + chrX_10_3200001 chrX_3200001 RAL-383 2563 chrX 3218490 3218512 chrX 3227659 3227681 roo 4 9169 1.0 2.0 1.5 1.6 9191 chrX 3218490 intron dnc + chrX 3223086 intron dnc + chrX 3227681 intron dnc + chrX_4_3220001 chrX_3220001 RAL-383 2564 chrX 3271673 3271713 chrX 3271764 3271810 5 88 4.0 1.5 2.8 1.3 137 chrX 3271673 intron dnc + chrX 3271742 intron dnc + chrX 3271810 intron dnc + chrX_5_3270001 chrX_3270001 RAL-383 2565 chrX 3306325 3306334 chrX 3306427 3306436 4 102 5.0 1.5 3.2 1.0 111 chrX 3306325 intron dnc + chrX 3306380 intron dnc + chrX 3306436 intron dnc + chrX_4_3305001 chrX_3305001 RAL-383 2566 chrX 3306337 3306368 chrX 3306425 3306470 4 93 2.5 2.0 2.2 1.2 133 chrX 3306337 intron dnc + chrX 3306404 intron dnc + chrX 3306470 intron dnc + chrX_4_3305001 chrX_3305001 RAL-383 2567 chrX 3398135 3398373 chrX 3398236 3398471 11 99 1.0 9.5 5.2 1.8 336 chrX 3398135 intron,intron CR44999 +,CG12535 - chrX 3398303 intron,intron CR44999 +,CG12535 - chrX 3398471 intron,intron CR44999 +,CG12535 - chrX_11_3395001 chrX_3395001 RAL-383 2568 chrX 3408980 3409016 chrX 3409061 3409113 7 93 0.0 3.5 1.8 2.5 133 chrX 3408980 intron,intron CR44999 +,CG12535 - chrX 3409046 intron,intron CR44999 +,CG12535 - chrX 3409113 intron,intron CR44999 +,CG12535 - chrX_7_3405001 chrX_3405001 RAL-383 2569 chrX 3415019 3415040 chrX 3421208 3421245 3S18 4 6200 1.5 2.5 2.0 1.3 6226 chrX 3415019 intron,intron CR44999 +,CG12535 - chrX 3418132 intron,intron CR44999 +,CG12535 - chrX 3421245 intron,intron CR44999 +,CG12535 - chrX_4_3415001 chrX_3415001 RAL-383 2570 chrX 3535386 3535436 chrX 3535496 3535547 8 103 3.5 2.5 3.0 2.0 161 chrX 3535386 intron CG32791 - chrX 3535466 intron CG32791 - chrX 3535547 intron CG32791 - chrX_8_3535001 chrX_3535001 RAL-383 2571 chrX 3567271 3567292 chrX 3567376 3567397 5 105 0.0 2.5 1.2 2.3 126 chrX 3567271 intron,intron CG32791 -,ppk8 + chrX 3567334 intron,intron CG32791 -,ppk8 + chrX 3567397 intron,intron CG32791 -,ppk8 + chrX_5_3565001 chrX_3565001 RAL-383 2572 chrX 3597538 3597553 chrX 3619723 3619741 roo 10 22186 9.5 4.0 6.8 1.3 22203 chrX 3597538 intron AstA-R1 + chrX 3608640 intron AstA-R1 + chrX 3619741 intron AstA-R1 + chrX_10_3605001 chrX_3605001 RAL-383 2573 chrX 3597555 3597581 chrX 3619720 3619766 roo 7 22182 5.0 2.5 3.8 1.5 22211 chrX 3597555 intron AstA-R1 + chrX 3608660 intron AstA-R1 + chrX 3619766 intron AstA-R1 + chrX_7_3605001 chrX_3605001 RAL-383 2574 chrX 3626122 3626146 chrX 3626227 3626251 9 105 0.0 0.0 0.0 9.0 129 chrX 3626122 intron AstA-R1 + chrX 3626186 intron AstA-R1 + chrX 3626251 intron AstA-R1 + chrX_9_3625001 chrX_3625001 RAL-383 2575 chrX 3657392 3657447 chrX 3657492 3657547 14 97 2.5 5.0 3.8 2.9 155 chrX 3657392 intron AstA-R1 + chrX 3657470 intron AstA-R1 + chrX 3657547 intron AstA-R1 + chrX_14_3655001 chrX_3655001 RAL-383 2576 chrX 3695904 3695948 chrX 3696012 3696056 8 108 3.0 1.5 2.2 2.5 152 chrX 3695904 intron Mnt + chrX 3695980 intron Mnt + chrX 3696056 intron Mnt + chrX_8_3695001 chrX_3695001 RAL-383 2577 chrX 3713085 3713131 chrX 3713213 3713260 7 124 1.5 3.5 2.5 2.0 175 chrX 3713085 intron Rala - chrX 3713172 intron Rala - chrX 3713260 intron Rala - chrX_7_3710001 chrX_3710001 RAL-383 2578 chrX 3726747 3726778 chrX 3730164 3730193 NOF 4 3414 3.5 0.0 1.8 1.4 3446 chrX 3726747 intron tlk + chrX 3728470 intron tlk + chrX 3730193 intron tlk + chrX_4_3725001 chrX_3725001 RAL-383 2579 chrX 3842311 3842353 chrX 3842571 3842614 pogo 9 261 0.5 5.0 2.8 2.4 303 chrX 3842311 intron ec + chrX 3842462 intron ec + chrX 3842614 intron ec + chrX_9_3840001 chrX_3840001 RAL-383 2580 chrX 3881255 3881298 chrX 3881414 3881457 12 158 3.0 1.0 2.0 4.0 202 chrX 3881255 intron VhaAC39-1 + chrX 3881356 intron VhaAC39-1 + chrX 3881457 exon VhaAC39-1 + chrX_12_3880001 chrX_3880001 RAL-383 2581 chrX 3890664 3890684 chrX 3890988 3891028 5 334 2.0 2.0 2.0 1.7 364 chrX 3890664 intergenic CG15239 + chrX 3890846 intergenic CG15239 + chrX 3891028 intergenic CG42541 - chrX_5_3890001 chrX_3890001 RAL-383 2582 chrX 3920828 3920873 chrX 3920953 3920999 12 124 4.0 2.5 3.2 2.9 171 chrX 3920828 intron CG42541 - chrX 3920914 intron CG42541 - chrX 3920999 intron CG42541 - chrX_12_3920001 chrX_3920001 RAL-383 2583 chrX 3986842 3986893 chrX 3994495 3994546 412 14 7648 4.0 5.5 4.8 2.4 7704 chrX 3986842 intergenic not near genes chrX 3990694 intergenic not near genes chrX 3994546 intergenic not near genes chrX_14_3990001 chrX_3990001 RAL-383 2584 chrX 4055640 4055656 chrX 4055743 4055759 6 102 4.0 6.5 5.2 1.0 119 chrX 4055640 intergenic not near genes chrX 4055700 intergenic not near genes chrX 4055759 intergenic not near genes chrX_6_4055001 chrX_4055001 RAL-383 2585 chrX 4132659 4132690 chrX 4132848 4132879 12 188 5.0 7.0 6.0 1.7 220 chrX 4132659 3` UTR GlcAT-I + chrX 4132769 3` UTR GlcAT-I + chrX 4132879 intergenic Fas2 -,GlcAT-I + chrX_12_4130001 chrX_4130001 RAL-383 2586 chrX 4157882 4157913 chrX 4164954 4164983 297 8 7066 2.0 2.5 2.2 2.5 7101 chrX 4157882 intron Fas2 - chrX 4161432 intron Fas2 - chrX 4164983 intron Fas2 - chrX_8_4160001 chrX_4160001 RAL-383 2587 chrX 4389377 4389379 chrX 12946235 12946235 5 8556858 3.5 12.0 7.8 0.6 8556858 chrX 4389377 intron CR32773 - chrX 8667806 intergenic not near genes chrX 12946235 3` UTR fne + chrX_5_8665001 chrX_8665001 RAL-383 2588 chrX 4411448 4411464 chrX 4411549 4411555 4 98 2.0 3.5 2.8 1.1 107 chrX 4411448 intron CR32773 - chrX 4411502 intron CR32773 - chrX 4411555 intron CR32773 - chrX_4_4410001 chrX_4410001 RAL-383 2589 chrX 4515827 4515859 chrX 4515925 4515957 13 96 2.0 5.5 3.8 2.7 130 chrX 4515827 intron CR32773 - chrX 4515892 intron CR32773 - chrX 4515957 intron CR32773 - chrX_13_4515001 chrX_4515001 RAL-383 2590 chrX 4525736 4525770 chrX 4525848 4525864 11 110 3.0 3.0 3.0 2.8 128 chrX 4525736 intron CR32773 - chrX 4525800 intron CR32773 - chrX 4525864 intron CR32773 - chrX_11_4525001 chrX_4525001 RAL-383 2591 chrX 4535436 4535480 chrX 4535533 4535577 13 97 1.0 2.0 1.5 5.2 141 chrX 4535436 intron,3` UTR CR32773 -,CG3556 + chrX 4535506 intron CR32773 - chrX 4535577 intron CR32773 - chrX_13_4535001 chrX_4535001 RAL-383 2592 chrX 4700377 4700412 chrX 4700740 4700775 jockey 6 363 2.0 3.5 2.8 1.6 398 chrX 4700377 3` UTR ctp + chrX 4700576 3` UTR ctp + chrX 4700775 3` UTR ctp + chrX_6_4700001 chrX_4700001 RAL-383 2593 chrX 4723565 4723585 chrX 4723665 4723682 5 99 5.0 4.5 4.8 0.9 117 chrX 4723565 exon Proc-R + chrX 4723624 intron Proc-R + chrX 4723682 intron Proc-R + chrX_5_4720001 chrX_4720001 RAL-383 2594 chrX 4763254 4763284 chrX 4763762 4763785 Stalker4 6 505 4.5 6.0 5.2 1.0 531 chrX 4763254 intergenic not near genes chrX 4763520 intergenic not near genes chrX 4763785 intergenic not near genes chrX_6_4760001 chrX_4760001 RAL-383 2595 chrX 4792369 4792402 chrX 4792811 4792855 jockey 6 451 3.0 2.5 2.8 1.6 486 chrX 4792369 intergenic not near genes chrX 4792612 intergenic not near genes chrX 4792855 intergenic not near genes chrX_6_4790001 chrX_4790001 RAL-383 2596 chrX 4827952 4827983 chrX 4835343 4835374 Stalker4 6 7390 4.5 2.0 3.2 1.4 7422 chrX 4827952 intergenic not near genes chrX 4831663 intergenic not near genes chrX 4835374 intergenic not near genes chrX_6_4830001 chrX_4830001 RAL-383 2597 chrX 4871199 4871226 chrX 4871319 4871346 7 117 3.5 0.0 1.8 2.5 147 chrX 4871199 intron CG42594 + chrX 4871272 intron CG42594 + chrX 4871346 intron CG42594 + chrX_7_4870001 chrX_4870001 RAL-383 2598 chrX 4930414 4930460 chrX 4930552 4930599 11 137 3.0 2.0 2.5 3.1 185 chrX 4930414 intron CG44774 - chrX 4930506 intron CG44774 - chrX 4930599 intron CG44774 - chrX_11_4930001 chrX_4930001 RAL-383 2599 chrX 4990024 4990056 chrX 4997258 4997287 roo 10 7234 2.0 1.5 1.8 3.6 7263 chrX 4990024 intron CR44833 - chrX 4993656 intron CR44833 - chrX 4997287 intron CR44833 - chrX_10_4990001 chrX_4990001 RAL-383 2600 chrX 5055842 5055880 chrX 5055994 5056020 9 149 2.0 2.5 2.2 2.8 178 chrX 5055842 intron,intron CR44833 -,ovo + chrX 5055931 intron,intron CR44833 -,ovo + chrX 5056020 intron,intron CR44833 -,ovo + chrX_9_5055001 chrX_5055001 RAL-383 2601 chrX 5096259 5096302 chrX 5103844 5103844 springer 6 7574 2.0 4.5 3.2 1.4 7585 chrX 5096259 intron,intron CG15465 +,rg + chrX 5100052 intron,intron CG15465 +,rg + chrX 5103844 intron,intron CG15465 +,rg + chrX_6_5100001 chrX_5100001 RAL-383 2602 chrX 5126756 5126805 chrX 5126866 5126908 7 109 1.5 2.5 2.0 2.3 152 chrX 5126756 intron,intron CG15465 +,rg + chrX 5126832 intron,intron CG15465 +,rg + chrX 5126908 intron,intron CG15465 +,rg + chrX_7_5125001 chrX_5125001 RAL-383 2603 chrX 5147838 5147877 chrX 5147964 5148002 7 125 2.5 1.0 1.8 2.5 164 chrX 5147838 intron,intron CG15465 +,rg + chrX 5147920 intron,intron CG15465 +,rg + chrX 5148002 intron,intron CG15465 +,rg + chrX_7_5145001 chrX_5145001 RAL-383 2604 chrX 5206298 5206309 chrX 5206591 5206602 6 293 3.5 7.5 5.5 0.9 304 chrX 5206298 intron,intron CG15465 +,rg + chrX 5206450 intron,intron CG15465 +,rg + chrX 5206602 intron,intron CG15465 +,rg + chrX_6_5205001 chrX_5205001 RAL-383 2605 chrX 5206321 5206331 chrX 5206580 5206623 4 282 1.5 6.5 4.0 0.8 302 chrX 5206321 intron,intron CG15465 +,rg + chrX 5206472 intron,intron CG15465 +,rg + chrX 5206623 intron,intron CG15465 +,rg + chrX_4_5205001 chrX_5205001 RAL-383 2606 chrX 5264045 5264074 chrX 5264155 5264184 6 110 2.5 4.5 3.5 1.3 139 chrX 5264045 intergenic not near genes chrX 5264114 intergenic not near genes chrX 5264184 intergenic not near genes chrX_6_5260001 chrX_5260001 RAL-383 2607 chrX 5277540 5277572 chrX 5277733 5277765 10 193 4.0 3.0 3.5 2.2 225 chrX 5277540 intergenic not near genes chrX 5277652 intergenic not near genes chrX 5277765 intergenic not near genes chrX_10_5275001 chrX_5275001 RAL-383 2608 chrX 5280109 5280129 chrX 5280338 5280348 5 230 3.0 1.5 2.2 1.6 239 chrX 5280109 intergenic not near genes chrX 5280228 intergenic not near genes chrX 5280348 intergenic not near genes chrX_5_5280001 chrX_5280001 RAL-383 2609 chrX 5338694 5338711 chrX 5339967 5339984 jockey 7 1271 2.5 0.5 1.5 2.8 1290 chrX 5338694 intergenic not near genes chrX 5339339 intergenic not near genes chrX 5339984 intergenic SK + chrX_7_5335001 chrX_5335001 RAL-383 2610 chrX 5349258 5349309 chrX 5349354 5349406 15 96 2.5 2.0 2.2 4.7 148 chrX 5349258 intron SK + chrX 5349332 intron SK + chrX 5349406 intron SK + chrX_15_5345001 chrX_5345001 RAL-383 2611 chrX 5366289 5366336 chrX 5366437 5366473 11 146 2.0 1.0 1.5 4.4 184 chrX 5366289 intron SK + chrX 5366381 intron SK + chrX 5366473 intron SK + chrX_11_5365001 chrX_5365001 RAL-383 2612 chrX 5389183 5389233 chrX 5389289 5389329 5 104 0.0 3.0 1.5 2.0 146 chrX 5389183 intron SK + chrX 5389256 intron SK + chrX 5389329 intron SK + chrX_5_5385001 chrX_5385001 RAL-383 2613 chrX 5401224 5401269 chrX 5401336 5401380 8 111 5.0 8.0 6.5 1.1 156 chrX 5401224 intron SK + chrX 5401302 intron SK + chrX 5401380 intron SK + chrX_8_5400001 chrX_5400001 RAL-383 2614 chrX 5452853 5452893 chrX 5453061 5453101 5 204 3.0 3.0 3.0 1.2 248 chrX 5452853 intron SPR + chrX 5452977 intron SPR + chrX 5453101 intron SPR + chrX_5_5450001 chrX_5450001 RAL-383 2615 chrX 5524830 5524856 chrX 5528705 5528739 412 6 3880 4.0 2.0 3.0 1.5 3909 chrX 5524830 intergenic snoRNA:Psi28S-3342 - chrX 5526784 intergenic not near genes chrX 5528739 intergenic Vsx2 - chrX_6_5525001 chrX_5525001 RAL-383 2616 chrX 5883802 5883829 chrX 5884063 5884090 pogo 4 261 5.0 3.0 4.0 0.8 288 chrX 5883802 intron CR45668 - chrX 5883946 intron CR45668 - chrX 5884090 intron CR45668 - chrX_4_5880001 chrX_5880001 RAL-383 2617 chrX 5884162 5884188 chrX 5884406 5884439 pogo 7 257 4.0 3.5 3.8 1.5 277 chrX 5884162 intron CR45668 - chrX 5884300 intron CR45668 - chrX 5884439 intron CR45668 - chrX_7_5880001 chrX_5880001 RAL-383 2618 chrX 6171580 6171613 chrX 6179014 6179065 Quasimodo 11 7451 1.5 2.0 1.8 3.9 7485 chrX 6171580 intron Ca-alpha1T - chrX 6175322 intron Ca-alpha1T - chrX 6179065 intron Ca-alpha1T - chrX_11_6175001 chrX_6175001 RAL-383 2619 chrX 6215515 6215532 chrX 6215609 6215633 7 98 0.5 3.5 2.0 2.3 118 chrX 6215515 intergenic not near genes chrX 6215574 intergenic not near genes chrX 6215633 intergenic not near genes chrX_7_6215001 chrX_6215001 RAL-383 2620 chrX 6315164 6315206 chrX 6315262 6315304 4 98 1.5 3.5 2.5 1.1 140 chrX 6315164 intron CG15894 + chrX 6315234 intron CG15894 + chrX 6315304 intron CG15894 + chrX_4_6315001 chrX_6315001 RAL-383 2621 chrX 6335217 6335240 chrX 6337747 6337770 Tirant 5 2527 0.0 7.5 3.8 1.0 2553 chrX 6335217 intergenic not near genes chrX 6336494 intergenic not near genes chrX 6337770 5` UTR CG3842 + chrX_5_6335001 chrX_6335001 RAL-383 2622 chrX 6388647 6388689 chrX 6388743 6388785 19 96 1.5 3.0 2.2 5.9 138 chrX 6388647 intergenic not near genes chrX 6388716 intergenic not near genes chrX 6388785 intergenic not near genes chrX_19_6385001 chrX_6385001 RAL-383 2623 chrX 6392851 6392897 chrX 6397636 6397652 Doc 7 4781 1.0 4.5 2.8 1.8 4801 chrX 6392851 intergenic not near genes chrX 6395252 intergenic not near genes chrX 6397652 intergenic not near genes chrX_7_6395001 chrX_6395001 RAL-383 2624 chrX 6562802 6562843 chrX 6571304 6571332 Tirant 6 8499 3.0 2.0 2.5 1.7 8530 chrX 6562802 intron CG34417 + chrX 6567067 intron CG34417 + chrX 6571332 intron CG34417 + chrX_6_6565001 chrX_6565001 RAL-383 2625 chrX 6591838 6591854 chrX 6591940 6591944 4 100 7.5 0.0 3.8 0.8 106 chrX 6591838 intron Pat1 + chrX 6591891 intron Pat1 + chrX 6591944 intron Pat1 + chrX_4_6590001 chrX_6590001 RAL-383 2626 chrX 6605458 6605507 chrX 6608500 6608549 Burdock 14 3040 3.0 6.0 4.5 2.5 3091 chrX 6605458 intron pigs + chrX 6607004 intron pigs + chrX 6608549 intron pigs + chrX_14_6605001 chrX_6605001 RAL-383 2627 chrX 6629772 6629787 chrX 6629879 6629894 6 107 6.0 3.5 4.8 1.0 122 chrX 6629772 intron pigs + chrX 6629833 intron pigs + chrX 6629894 intron pigs + chrX_6_6625001 chrX_6625001 RAL-383 2628 chrX 6737512 6737525 chrX 6737614 6737623 6 99 4.5 2.5 3.5 1.3 111 chrX 6737512 intron CG3168 - chrX 6737568 intron CG3168 - chrX 6737623 intron CG3168 - chrX_6_6735001 chrX_6735001 RAL-383 2629 chrX 6792079 6792089 chrX 6792185 6792195 4 105 1.0 5.5 3.2 1.0 116 chrX 6792079 intron C3G - chrX 6792137 intron C3G - chrX 6792195 intron C3G - chrX_4_6790001 chrX_6790001 RAL-383 2630 chrX 6897563 6897711 chrX 6897661 6897824 21 114 1.0 1.0 1.0 10.5 261 chrX 6897563 intergenic not near genes chrX 6897694 intergenic not near genes chrX 6897824 intergenic not near genes chrX_21_6895001 chrX_6895001 RAL-383 2631 chrX 6948363 6948395 chrX 6948462 6948494 5 99 4.0 1.5 2.8 1.3 131 chrX 6948363 intron CG14431 + chrX 6948428 intron CG14431 + chrX 6948494 intron CG14431 + chrX_5_6945001 chrX_6945001 RAL-383 2632 chrX 6984604 6984653 chrX 6984701 6984750 8 97 4.5 5.0 4.8 1.4 146 chrX 6984604 intron ogre - chrX 6984677 intron ogre - chrX 6984750 intron ogre - chrX_8_6980001 chrX_6980001 RAL-383 2633 chrX 6989494 6989532 chrX 6989601 6989636 8 104 1.5 5.0 3.2 1.9 142 chrX 6989494 intron ogre - chrX 6989565 intron ogre - chrX 6989636 intron ogre - chrX_8_6985001 chrX_6985001 RAL-383 2634 chrX 7023589 7023633 chrX 7030991 7031018 Tabor 12 7402 3.5 4.5 4.0 2.4 7429 chrX 7023589 intron CG12541 - chrX 7027304 intron CG12541 - chrX 7031018 intron CG12541 - chrX_12_7025001 chrX_7025001 RAL-383 2635 chrX 7061781 7061804 chrX 7062111 7062140 5 335 5.5 4.5 5.0 0.8 359 chrX 7061781 intron CG12541 - chrX 7061960 intron CG12541 - chrX 7062140 intron CG12541 - chrX_5_7060001 chrX_7060001 RAL-383 2636 chrX 7125234 7125270 chrX 7134413 7134448 roo 7 9179 0.0 5.5 2.8 1.8 9214 chrX 7125234 intergenic not near genes chrX 7129841 intergenic not near genes chrX 7134448 intergenic not near genes chrX_7_7125001 chrX_7125001 RAL-383 2637 chrX 7270076 7270111 chrX 7270174 7270207 10 94 3.0 2.0 2.5 2.9 131 chrX 7270076 intron CR44357 - chrX 7270142 intron CR44357 - chrX 7270207 intron CR44357 - chrX_10_7270001 chrX_7270001 RAL-383 2638 chrX 7294499 7294539 chrX 7294616 7294657 9 111 4.0 3.0 3.5 2.0 158 chrX 7294499 intron,intron CR44357 -,CG1677 - chrX 7294578 intron,intron CR44357 -,CG1677 - chrX 7294657 intron,intron CR44357 -,CG1677 - chrX_9_7290001 chrX_7290001 RAL-383 2639 chrX 7467874 7467919 chrX 7467975 7467991 9 97 2.5 5.0 3.8 1.9 117 chrX 7467874 intergenic not near genes chrX 7467932 intergenic not near genes chrX 7467991 intergenic not near genes chrX_9_7465001 chrX_7465001 RAL-383 2640 chrX 7471047 7471097 chrX 7471445 7471499 15 399 18.5 26.0 22.2 0.6 452 chrX 7471047 intergenic not near genes chrX 7471273 intergenic not near genes chrX 7471499 intergenic not near genes chrX_15_7470001 chrX_7470001 RAL-383 2641 chrX 7702885 7702928 chrX 7703344 7703371 jockey 15 455 4.5 3.5 4.0 3.0 486 chrX 7702885 intron CHES-1-like - chrX 7703128 intron CHES-1-like - chrX 7703371 intron CHES-1-like - chrX_15_7700001 chrX_7700001 RAL-383 2642 chrX 7832420 7832463 chrX 7832529 7832561 11 108 3.5 5.0 4.2 2.1 141 chrX 7832420 intron CG1402 + chrX 7832490 intron CG1402 + chrX 7832561 intron CG1402 + chrX_11_7830001 chrX_7830001 RAL-383 2643 chrX 7845716 7845754 chrX 7847216 7847259 hopper2 4 1506 2.5 0.5 1.5 1.6 1543 chrX 7845716 intergenic not near genes chrX 7846488 intergenic not near genes chrX 7847259 intergenic not near genes chrX_4_7845001 chrX_7845001 RAL-383 2644 chrX 8079898 8079933 chrX 8080028 8080063 13 129 2.0 2.5 2.2 4.1 165 chrX 8079898 exon CG2254 - chrX 8079980 intron CG2254 - chrX 8080063 intron CG2254 - chrX_13_8075001 chrX_8075001 RAL-383 2645 chrX 8163628 8163649 chrX 8163712 8163750 4 97 0.0 2.5 1.2 1.8 122 chrX 8163628 intergenic CR45536 + chrX 8163689 intergenic CR45536 + chrX 8163750 intergenic CR45536 + chrX_4_8160001 chrX_8160001 RAL-383 2646 chrX 8263750 8263790 chrX 8263856 8263896 8 106 1.0 0.5 0.8 4.4 146 chrX 8263750 intron CG1632 + chrX 8263823 intron CG1632 + chrX 8263896 intron CG1632 + chrX_8_8260001 chrX_8260001 RAL-383 2647 chrX 8421465 8421490 chrX 8421577 8421602 8 110 2.5 6.0 4.2 1.5 137 chrX 8421465 intron Trf2 + chrX 8421534 intron Trf2 + chrX 8421602 intron Trf2 + chrX_8_8420001 chrX_8420001 RAL-383 2648 chrX 8509115 8509148 chrX 8509209 8509245 5 96 1.0 6.5 3.8 1.0 130 chrX 8509115 intron CG33181 + chrX 8509180 intron CG33181 + chrX 8509245 intron CG33181 + chrX_5_8505001 chrX_8505001 RAL-383 2649 chrX 8544127 8544160 chrX 8544226 8544256 6 98 1.5 1.0 1.2 2.7 129 chrX 8544127 intron Nrg + chrX 8544192 intron Nrg + chrX 8544256 intron Nrg + chrX_6_8540001 chrX_8540001 RAL-383 2650 chrX 8772230 8772251 chrX 8772329 8772350 4 96 4.0 4.5 4.2 0.8 120 chrX 8772230 intron Lim1 - chrX 8772290 intron Lim1 - chrX 8772350 intron Lim1 - chrX_4_8770001 chrX_8770001 RAL-383 2651 chrX 8885650 8885697 chrX 8885770 8885817 10 120 0.0 3.0 1.5 4.0 167 chrX 8885650 intron Moe - chrX 8885734 intron Moe - chrX 8885817 intron Moe - chrX_10_8885001 chrX_8885001 RAL-383 2652 chrX 8888622 8888662 chrX 8888719 8888759 7 97 3.5 2.0 2.8 1.8 137 chrX 8888622 intron Moe - chrX 8888690 intron Moe - chrX 8888759 intron Moe - chrX_7_8885001 chrX_8885001 RAL-383 2653 chrX 8894078 8894132 chrX 8894199 8894248 12 120 2.0 1.5 1.8 4.3 170 chrX 8894078 intron Moe - chrX 8894163 intron Moe - chrX 8894248 intron Moe - chrX_12_8890001 chrX_8890001 RAL-383 2654 chrX 8922325 8922348 chrX 8922766 8922777 jockey 7 442 5.5 3.5 4.5 1.3 452 chrX 8922325 intron rdgA + chrX 8922551 intron rdgA + chrX 8922777 intron rdgA + chrX_7_8920001 chrX_8920001 RAL-383 2655 chrX 8943336 8943375 chrX 8943471 8943505 5 130 3.5 1.0 2.2 1.6 169 chrX 8943336 intron rdgA + chrX 8943420 intron rdgA + chrX 8943505 intron rdgA + chrX_5_8940001 chrX_8940001 RAL-383 2656 chrX 8948740 8948783 chrX 8956270 8956313 roo 8 7526 2.0 2.5 2.2 2.5 7573 chrX 8948740 intron rdgA + chrX 8952526 intron rdgA + chrX 8956313 intron rdgA + chrX_8_8950001 chrX_8950001 RAL-383 2657 chrX 9273005 9273043 chrX 9273106 9273143 14 100 3.0 3.0 3.0 3.5 138 chrX 9273005 intergenic Cfp1 -,CG16892 + chrX 9273074 intergenic Cfp1 -,CG16892 + chrX 9273143 intergenic Cfp1 -,CG16892 + chrX_14_9270001 chrX_9270001 RAL-383 2658 chrX 9337926 9337971 chrX 9338037 9338083 9 108 0.0 1.0 0.5 6.0 157 chrX 9337926 intron CG34449 - chrX 9338004 intron CG34449 - chrX 9338083 exon CG34449 - chrX_9_9335001 chrX_9335001 RAL-383 2659 chrX 9508121 9508131 chrX 9509659 9509669 jockey 4 1538 6.0 3.0 4.5 0.7 1548 chrX 9508121 intron CG32700 - chrX 9508895 intron CG32700 - chrX 9509669 intron CG32700 - chrX_4_9505001 chrX_9505001 RAL-383 2660 chrX 9508137 9508159 chrX 9509651 9509697 jockey 5 1533 4.5 2.5 3.5 1.1 1560 chrX 9508137 intron CG32700 - chrX 9508917 intron CG32700 - chrX 9509697 intron CG32700 - chrX_5_9505001 chrX_9505001 RAL-383 2661 chrX 9575777 9575824 chrX 9576120 9576167 mdg3 11 333 0.5 3.5 2.0 3.7 390 chrX 9575777 intron,exon CG32699 -,CG42395 - chrX 9575972 intron,intron CG32699 -,CG42395 - chrX 9576167 intron,5` UTR CG32699 -,CG42395 - chrX_11_9575001 chrX_9575001 RAL-383 2662 chrX 9635087 9635120 chrX 9635208 9635241 5 120 6.0 5.0 5.5 0.8 154 chrX 9635087 intron l(1)G0232 - chrX 9635164 intron l(1)G0232 - chrX 9635241 intron l(1)G0232 - chrX_5_9635001 chrX_9635001 RAL-383 2663 chrX 9758039 9758053 chrX 9758143 9758157 4 104 4.5 0.0 2.2 1.2 118 chrX 9758039 intergenic not near genes chrX 9758098 intergenic not near genes chrX 9758157 intergenic not near genes chrX_4_9755001 chrX_9755001 RAL-383 2664 chrX 7995775 7995777 chrX 9845361 9845361 4 1849586 2.0 11.0 6.5 0.5 1849586 chrX 7995775 5` UTR Tbh + chrX 8920568 intron rdgA + chrX 9845361 intron CG32698 + chrX_4_8920001 chrX_8920001 RAL-383 2665 chrX 10024733 10024756 chrX 10026112 10026135 6 1379 26.5 17.0 21.8 0.3 1402 chrX 10024733 intron Cht6 + chrX 10025434 intron Cht6 + chrX 10026135 intron Cht6 + chrX_6_10025001 chrX_10025001 RAL-383 2666 chrX 10138199 10138247 chrX 10145723 10145771 412 15 7524 6.5 3.5 5.0 2.5 7572 chrX 10138199 intron,intron RhoU +,CR44894 - chrX 10141985 intron,intron RhoU +,CR44894 - chrX 10145771 intron,intron RhoU +,CR44894 - chrX_15_10140001 chrX_10140001 RAL-383 2667 chrX 10154269 10154299 chrX 10154365 10154370 9 92 7.5 4.5 6.0 1.3 101 chrX 10154269 intron,intron CR44894 -,CG12645 + chrX 10154320 intron,intron CR44894 -,CG12645 + chrX 10154370 intron,intron CR44894 -,CG12645 + chrX_9_10150001 chrX_10150001 RAL-383 2668 chrX 10248616 10248653 chrX 10248713 10248746 8 96 4.0 4.0 4.0 1.6 130 chrX 10248616 intron Hk - chrX 10248681 intron Hk - chrX 10248746 intron Hk - chrX_8_10245001 chrX_10245001 RAL-383 2669 chrX 10317546 10317575 chrX 10317637 10317673 9 97 1.0 2.5 1.8 3.2 127 chrX 10317546 intron alpha-Man-I - chrX 10317610 intron alpha-Man-I - chrX 10317673 intron alpha-Man-I - chrX_9_10315001 chrX_10315001 RAL-383 2670 chrX 10348780 10348831 chrX 10356365 10356396 springer 6 7582 4.5 2.0 3.2 1.4 7616 chrX 10348780 intergenic snoRNA:U3:9B + chrX 10352588 intergenic not near genes chrX 10356396 intergenic l(1)G0289 - chrX_6_10350001 chrX_10350001 RAL-383 2671 chrX 10367176 10367204 chrX 10367304 10367325 7 126 2.0 3.0 2.5 2.0 149 chrX 10367176 exon CG32679 - chrX 10367250 intron CG32679 - chrX 10367325 intron CG32679 - chrX_7_10365001 chrX_10365001 RAL-383 2672 chrX 10382649 10382690 chrX 10382750 10382792 7 99 1.5 2.0 1.8 2.5 143 chrX 10382649 exon CG17841 + chrX 10382720 3` UTR CG17841 + chrX 10382792 3` UTR CG17841 + chrX_7_10380001 chrX_10380001 RAL-383 2673 chrX 10453049 10453103 chrX 10453260 10453293 17 209 1.5 0.5 1.0 8.5 244 chrX 10453049 intron CG32683 - chrX 10453171 intron CG32683 - chrX 10453293 intron CG32683 - chrX_17_10450001 chrX_10450001 RAL-383 2674 chrX 10525043 10525067 chrX 10532132 10532155 297 6 7087 6.0 4.0 5.0 1.0 7112 chrX 10525043 intron spri - chrX 10528599 intron spri - chrX 10532155 intron spri - chrX_6_10525001 chrX_10525001 RAL-383 2675 chrX 10550852 10550885 chrX 10552330 10552339 hobo 6 1477 2.5 3.0 2.8 1.6 1487 chrX 10550852 intron spri - chrX 10551596 intron spri - chrX 10552339 intron spri - chrX_6_10550001 chrX_10550001 RAL-383 2676 chrX 10665338 10665345 chrX 10665467 10665477 4 131 0.5 4.5 2.5 1.1 139 chrX 10665338 intron X11Lbeta + chrX 10665408 intron X11Lbeta + chrX 10665477 intron X11Lbeta + chrX_4_10665001 chrX_10665001 RAL-383 2677 chrX 10665346 10665371 chrX 10665458 10665486 12 124 0.5 3.5 2.0 4.0 140 chrX 10665346 intron X11Lbeta + chrX 10665416 intron X11Lbeta + chrX 10665486 intron X11Lbeta + chrX_12_10665001 chrX_10665001 RAL-383 2678 chrX 10686031 10686082 chrX 10691187 10691239 roo 12 5154 1.0 2.5 1.8 4.3 5208 chrX 10686031 intron X11Lbeta + chrX 10688635 intron X11Lbeta + chrX 10691239 intron X11Lbeta + chrX_12_10685001 chrX_10685001 RAL-383 2679 chrX 10719127 10719149 chrX 10719231 10719253 6 103 0.0 8.0 4.0 1.2 126 chrX 10719127 intron CG32676 - chrX 10719190 intron CG32676 - chrX 10719253 intron CG32676 - chrX_6_10715001 chrX_10715001 RAL-383 2680 chrX 10803020 10803038 chrX 10803125 10803143 5 102 5.0 6.0 5.5 0.8 123 chrX 10803020 intron Imp - chrX 10803082 intron Imp - chrX 10803143 intron Imp - chrX_5_10800001 chrX_10800001 RAL-383 2681 chrX 10803040 10803049 chrX 10803121 10803153 7 101 4.0 5.0 4.5 1.3 113 chrX 10803040 intron Imp - chrX 10803096 intron Imp - chrX 10803153 intron Imp - chrX_7_10800001 chrX_10800001 RAL-383 2682 chrX 10987437 10987486 chrX 10987551 10987593 13 108 2.0 3.5 2.8 3.4 156 chrX 10987437 intron CG42339 - chrX 10987515 intron CG42339 - chrX 10987593 intron CG42339 - chrX_13_10985001 chrX_10985001 RAL-383 2683 chrX 11095991 11096025 chrX 11103113 11103147 HMS-Beagle 8 7122 1.0 5.5 3.2 1.9 7156 chrX 11095991 intergenic not near genes chrX 11099569 intergenic not near genes chrX 11103147 intron CG42249 + chrX_8_11095001 chrX_11095001 RAL-383 2684 chrX 11109417 11109418 chrX 12946233 12946235 25 1836817 19.5 12.5 16.0 1.5 1836818 chrX 11109417 intron Hsp60 + chrX 12027826 exon Usp7 - chrX 12946235 3` UTR fne + chrX_25_12025001 chrX_12025001 RAL-383 2685 chrX 11166736 11166785 chrX 11166837 11166886 14 99 1.0 4.0 2.5 4.0 150 chrX 11166736 intergenic not near genes chrX 11166811 intergenic not near genes chrX 11166886 intergenic not near genes chrX_14_11165001 chrX_11165001 RAL-383 2686 chrX 11254148 11254186 chrX 11254279 11254317 8 131 3.5 2.0 2.8 2.1 169 chrX 11254148 intron CG44422 - chrX 11254232 intron CG44422 - chrX 11254317 intron CG44422 - chrX_8_11250001 chrX_11250001 RAL-383 2687 chrX 11277340 11277621 chrX 11277454 11277725 8 109 2.0 0.0 1.0 4.0 385 chrX 11277340 intron CG44422 - chrX 11277532 intron CG44422 - chrX 11277725 intron CG44422 - chrX_8_11275001 chrX_11275001 RAL-383 2688 chrX 11312039 11312091 chrX 11319412 11319436 Stalker2 11 7359 2.5 0.5 1.5 4.4 7397 chrX 11312039 intergenic not near genes chrX 11315738 intergenic not near genes chrX 11319436 intergenic not near genes chrX_11_11315001 chrX_11315001 RAL-383 2689 chrX 11535031 11535040 chrX 11541521 11541530 Burdock 4 6490 11.0 5.5 8.2 0.4 6499 chrX 11535031 intron Drak + chrX 11538280 intron Drak + chrX 11541530 intron Drak + chrX_4_11535001 chrX_11535001 RAL-383 2690 chrX 11571438 11571484 chrX 11571695 11571741 pogo 16 256 7.5 5.5 6.5 2.1 303 chrX 11571438 3` UTR Kmn1 - chrX 11571590 3` UTR Kmn1 - chrX 11571741 3` UTR Kmn1 - chrX_16_11570001 chrX_11570001 RAL-383 2691 chrX 11633399 11633445 chrX 11640473 11640519 297 12 7072 4.5 6.0 5.2 1.9 7120 chrX 11633399 intron Ptp10D + chrX 11636959 intron Ptp10D + chrX 11640519 intron Ptp10D + chrX_12_11635001 chrX_11635001 RAL-383 2692 chrX 11645088 11645132 chrX 11648277 11648322 NOF 6 3189 1.5 2.5 2.0 2.0 3234 chrX 11645088 intron Ptp10D + chrX 11646705 intron Ptp10D + chrX 11648322 intron Ptp10D + chrX_6_11645001 chrX_11645001 RAL-383 2693 chrX 11719855 11719888 chrX 11719955 11719988 6 100 2.0 3.5 2.8 1.6 133 chrX 11719855 3` UTR prtp + chrX 11719922 intergenic prtp +,Tango10 + chrX 11719988 intergenic prtp +,Tango10 + chrX_6_11715001 chrX_11715001 RAL-383 2694 chrX 11804656 11804684 chrX 11804780 11804808 8 124 3.5 2.0 2.8 2.1 152 chrX 11804656 intron Hsc70-3 - chrX 11804732 intron Hsc70-3 - chrX 11804808 intron Hsc70-3 - chrX_8_11800001 chrX_11800001 RAL-383 2695 chrX 11880914 11880952 chrX 11881016 11881054 11 98 2.5 2.5 2.5 3.1 140 chrX 11880914 exon CG10353 - chrX 11880984 intron CG10353 - chrX 11881054 intron CG10353 - chrX_11_11880001 chrX_11880001 RAL-383 2696 chrX 11922346 11922381 chrX 11922499 11922528 13 151 3.0 2.5 2.8 3.4 182 chrX 11922346 exon Sclp - chrX 11922437 intron Sclp - chrX 11922528 intron Sclp - chrX_13_11920001 chrX_11920001 RAL-383 2697 chrX 11936550 11936584 chrX 11936669 11936678 9 114 0.0 3.0 1.5 3.6 128 chrX 11936550 intron cac - chrX 11936614 intron cac - chrX 11936678 intron cac - chrX_9_11935001 chrX_11935001 RAL-383 2698 chrX 11975925 11975958 chrX 11976041 11976074 10 114 6.5 3.5 5.0 1.7 149 chrX 11975925 intron cac - chrX 11976000 intron cac - chrX 11976074 intron cac - chrX_10_11975001 chrX_11975001 RAL-383 2699 chrX 12053511 12053559 chrX 12054059 12054107 10 547 1.0 1.5 1.2 4.5 596 chrX 12053511 intron,intron CR43960 +,Ten-a + chrX 12053809 intron,intron CR43960 +,Ten-a + chrX 12054107 intron,intron CR43960 +,Ten-a + chrX_10_12050001 chrX_12050001 RAL-383 2700 chrX 12168124 12168148 chrX 12173586 12173609 I-element 4 5461 4.0 2.0 3.0 1.0 5485 chrX 12168124 intron Ten-a + chrX 12170866 intron Ten-a + chrX 12173609 intron Ten-a + chrX_4_12170001 chrX_12170001 RAL-383 2701 chrX 12272838 12272858 chrX 12272925 12272957 10 96 3.5 2.5 3.0 2.5 119 chrX 12272838 intron Ten-a + chrX 12272898 intron Ten-a + chrX 12272957 intron Ten-a + chrX_10_12270001 chrX_12270001 RAL-383 2702 chrX 12499926 12499970 chrX 12500080 12500124 8 151 2.5 2.0 2.2 2.5 198 chrX 12499926 intron CG2556 + chrX 12500025 intron CG2556 + chrX 12500124 intron CG2556 + chrX_8_12500001 chrX_12500001 RAL-383 2703 chrX 12528850 12528867 chrX 12528946 12528963 4 96 7.5 1.0 4.2 0.8 113 chrX 12528850 intron CG43921 - chrX 12528906 intron CG43921 - chrX 12528963 intron CG43921 - chrX_4_12525001 chrX_12525001 RAL-383 2704 chrX 12533775 12533817 chrX 12533872 12533913 4 96 0.5 1.0 0.8 2.2 138 chrX 12533775 intron CG43921 - chrX 12533844 intron CG43921 - chrX 12533913 intron CG43921 - chrX_4_12530001 chrX_12530001 RAL-383 2705 chrX 12557456 12557480 chrX 12557555 12557581 5 100 2.5 0.0 1.2 2.3 125 chrX 12557456 intron CG43921 - chrX 12557518 intron CG43921 - chrX 12557581 intron CG43921 - chrX_5_12555001 chrX_12555001 RAL-383 2706 chrX 12752262 12752310 chrX 12752369 12752417 9 105 2.5 2.5 2.5 2.6 155 chrX 12752262 5` UTR CR44619 + chrX 12752340 5` UTR CR44619 + chrX 12752417 intron CR44619 + chrX_9_12750001 chrX_12750001 RAL-383 2707 chrX 12843567 12843592 chrX 12843659 12843690 4 96 4.5 4.5 4.5 0.7 123 chrX 12843567 intron Pde9 - chrX 12843628 intron Pde9 - chrX 12843690 intron Pde9 - chrX_4_12840001 chrX_12840001 RAL-383 2708 chrX 12912608 12912651 chrX 12912724 12912768 6 117 1.5 1.0 1.2 2.7 160 chrX 12912608 5` UTR CR45625 + chrX 12912688 5` UTR CR45625 + chrX 12912768 5` UTR CR45625 + chrX_6_12910001 chrX_12910001 RAL-383 2709 chrX 11109417 11109417 chrX 12946233 12946233 4 1836816 19.5 12.5 16.0 0.2 1836816 chrX 11109417 intron Hsp60 + chrX 12027825 exon Usp7 - chrX 12946233 3` UTR fne + chrX_4_12025001 chrX_12025001 RAL-383 2710 chrX 11109417 11109417 chrX 12946235 12946235 15 1836818 19.5 12.0 15.8 0.9 1836818 chrX 11109417 intron Hsp60 + chrX 12027826 exon Usp7 - chrX 12946235 3` UTR fne + chrX_15_12025001 chrX_12025001 RAL-383 2711 chrX 12971675 12971698 chrX 12971772 12971781 6 93 4.0 2.5 3.2 1.4 106 chrX 12971675 intron,exon CR43636 -,CG15721 + chrX 12971728 intron,exon CR43636 -,CG15721 + chrX 12971781 intron,exon CR43636 -,CG15721 + chrX_6_12970001 chrX_12970001 RAL-383 2712 chrX 13035506 13035515 chrX 13035580 13035610 4 83 0.0 2.5 1.2 1.8 104 chrX 13035506 intron rad + chrX 13035558 intron rad + chrX 13035610 intron rad + chrX_4_13035001 chrX_13035001 RAL-383 2713 chrX 13109322 13109364 chrX 13109433 13109474 11 109 4.5 2.5 3.5 2.4 152 chrX 13109322 intron CG43313 - chrX 13109398 intron CG43313 - chrX 13109474 intron CG43313 - chrX_11_13105001 chrX_13105001 RAL-383 2714 chrX 13146578 13146629 chrX 13146686 13146737 11 108 3.0 4.0 3.5 2.4 159 chrX 13146578 intron CG32645 + chrX 13146658 intron CG32645 + chrX 13146737 intron CG32645 + chrX_11_13145001 chrX_13145001 RAL-383 2715 chrX 13236893 13236897 chrX 13236998 13237002 4 105 1.0 5.5 3.2 1.0 109 chrX 13236893 intron mew - chrX 13236948 intron mew - chrX 13237002 intron mew - chrX_4_13235001 chrX_13235001 RAL-383 2716 chrX 13374821 13374865 chrX 13374920 13374965 7 100 2.0 1.5 1.8 2.5 144 chrX 13374821 intron CG1640 + chrX 13374893 intron CG1640 + chrX 13374965 intron CG1640 + chrX_7_13370001 chrX_13370001 RAL-383 2717 chrX 13401463 13401515 chrX 13401835 13401877 jockey 5 370 3.5 1.5 2.5 1.4 414 chrX 13401463 intergenic CG1673 +,CG12725 - chrX 13401670 intergenic CG12725 -,CG1673 + chrX 13401877 3` UTR CG12725 - chrX_5_13400001 chrX_13400001 RAL-383 2718 chrX 13429469 13429484 chrX 13430633 13430653 jockey 4 1168 0.0 7.0 3.5 0.9 1184 chrX 13429469 intergenic not near genes chrX 13430061 intergenic not near genes chrX 13430653 intergenic not near genes chrX_4_13430001 chrX_13430001 RAL-383 2719 chrX 13429485 13429493 chrX 13430619 13430642 jockey 4 1154 0.0 4.5 2.2 1.2 1157 chrX 13429485 intergenic not near genes chrX 13430064 intergenic not near genes chrX 13430642 intergenic not near genes chrX_4_13430001 chrX_13430001 RAL-383 2720 chrX 13442119 13442171 chrX 13442230 13442282 10 109 0.0 2.5 1.2 4.5 163 chrX 13442119 intergenic not near genes chrX 13442200 intergenic not near genes chrX 13442282 intergenic not near genes chrX_10_13440001 chrX_13440001 RAL-383 2721 chrX 13463637 13463674 chrX 13469223 13469271 mdg3 12 5596 3.5 5.0 4.2 2.3 5634 chrX 13463637 intron Neto + chrX 13466454 intron Neto + chrX 13469271 intron Neto + chrX_12_13465001 chrX_13465001 RAL-383 2722 chrX 13501839 13501870 chrX 13502277 13502328 10 452 5.0 5.0 5.0 1.7 489 chrX 13501839 intron Neto + chrX 13502084 intron Neto + chrX 13502328 intron Neto + chrX_10_13500001 chrX_13500001 RAL-383 2723 chrX 13526928 13526977 chrX 13527176 13527217 4 241 4.0 1.5 2.8 1.1 289 chrX 13526928 3` UTR Neto + chrX 13527072 3` UTR Neto + chrX 13527217 3` UTR Neto + chrX_4_13525001 chrX_13525001 RAL-383 2724 chrX 13734081 13734105 chrX 13734191 13734217 4 106 4.0 4.5 4.2 0.8 136 chrX 13734081 intron g - chrX 13734149 intron g - chrX 13734217 intron g - chrX_4_13730001 chrX_13730001 RAL-383 2725 chrX 13791143 13791181 chrX 13791314 13791352 6 171 4.5 0.0 2.2 1.9 209 chrX 13791143 intron inaE + chrX 13791248 intron inaE + chrX 13791352 intron inaE + chrX_6_13790001 chrX_13790001 RAL-383 2726 chrX 13843373 13843409 chrX 13843546 13843582 10 172 3.5 4.5 4.0 2.0 209 chrX 13843373 intron AMPdeam - chrX 13843478 intron AMPdeam - chrX 13843582 intron AMPdeam - chrX_10_13840001 chrX_13840001 RAL-383 2727 chrX 13934280 13934309 chrX 13934383 13934412 7 103 2.5 3.5 3.0 1.8 132 chrX 13934280 intron mamo - chrX 13934346 intron mamo - chrX 13934412 intron mamo - chrX_7_13930001 chrX_13930001 RAL-383 2728 chrX 13935506 13935522 chrX 13935601 13935625 7 102 4.0 8.5 6.2 1.0 119 chrX 13935506 intron mamo - chrX 13935566 intron mamo - chrX 13935625 intron mamo - chrX_7_13935001 chrX_13935001 RAL-383 2729 chrX 13937964 13938006 chrX 13941254 13941292 I-element 6 3290 2.0 1.5 1.8 2.1 3328 chrX 13937964 intron mamo - chrX 13939628 intron mamo - chrX 13941292 intron mamo - chrX_6_13935001 chrX_13935001 RAL-383 2730 chrX 13975874 13975900 chrX 13975971 13975987 9 94 0.0 5.0 2.5 2.6 113 chrX 13975874 intron mamo - chrX 13975930 intron mamo - chrX 13975987 intron mamo - chrX_9_13975001 chrX_13975001 RAL-383 2731 chrX 14015586 14015598 chrX 14015982 14015994 5 396 1.5 3.5 2.5 1.4 408 chrX 14015586 intergenic not near genes chrX 14015790 intergenic not near genes chrX 14015994 intergenic not near genes chrX_5_14015001 chrX_14015001 RAL-383 2732 chrX 14064137 14064171 chrX 14064254 14064288 8 117 0.5 3.0 1.8 2.9 151 chrX 14064137 intergenic not near genes chrX 14064212 intergenic not near genes chrX 14064288 intergenic not near genes chrX_8_14060001 chrX_14060001 RAL-383 2733 chrX 14105015 14105052 chrX 14114179 14114223 roo 6 9162 2.5 2.5 2.5 1.7 9208 chrX 14105015 intergenic not near genes chrX 14109619 intergenic not near genes chrX 14114223 5` UTR CR44657 + chrX_6_14105001 chrX_14105001 RAL-383 2734 chrX 14131502 14131521 chrX 14131568 14131606 4 77 0.5 0.5 0.5 2.7 104 chrX 14131502 intergenic not near genes chrX 14131554 intergenic not near genes chrX 14131606 intergenic not near genes chrX_4_14130001 chrX_14130001 RAL-383 2735 chrX 14157580 14157595 chrX 14163256 14163272 297 5 5677 6.0 2.0 4.0 1.0 5692 chrX 14157580 intergenic not near genes chrX 14160426 intergenic not near genes chrX 14163272 intergenic not near genes chrX_5_14160001 chrX_14160001 RAL-383 2736 chrX 14209444 14209481 chrX 14209555 14209592 8 108 3.5 1.5 2.5 2.3 148 chrX 14209444 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209518 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209592 intron,intron l(1)G0007 +,l(1)G0469 - chrX_8_14205001 chrX_14205001 RAL-383 2737 chrX 14221959 14221988 chrX 14222055 14222084 7 96 0.5 6.5 3.5 1.6 125 chrX 14221959 intron l(1)G0007 + chrX 14222022 intron l(1)G0007 + chrX 14222084 intron l(1)G0007 + chrX_7_14220001 chrX_14220001 RAL-383 2738 chrX 14321470 14321491 chrX 14321627 14321648 7 157 8.5 4.5 6.5 0.9 178 chrX 14321470 intergenic not near genes chrX 14321559 intergenic not near genes chrX 14321648 intergenic not near genes chrX_7_14320001 chrX_14320001 RAL-383 2739 chrX 14381393 14381408 chrX 14381567 14381582 5 174 3.5 0.0 1.8 1.8 189 chrX 14381393 intron,3` UTR dpr8 +,betaNACtes4 + chrX 14381488 intron dpr8 + chrX 14381582 intron dpr8 + chrX_5_14380001 chrX_14380001 RAL-383 2740 chrX 14416301 14416320 chrX 14421089 14421108 F-element 4 4788 4.0 7.0 5.5 0.6 4807 chrX 14416301 intron dpr8 + chrX 14418704 intron dpr8 + chrX 14421108 intron dpr8 + chrX_4_14415001 chrX_14415001 RAL-383 2741 chrX 14500487 14500537 chrX 14500604 14500658 9 118 2.0 2.0 2.0 3.0 171 chrX 14500487 intergenic not near genes chrX 14500572 intergenic not near genes chrX 14500658 intergenic not near genes chrX_9_14500001 chrX_14500001 RAL-383 2742 chrX 14589685 14589704 chrX 14589940 14589957 pogo 4 256 2.0 1.0 1.5 1.6 272 chrX 14589685 intron CG9413 - chrX 14589821 intron CG9413 - chrX 14589957 intron CG9413 - chrX_4_14585001 chrX_14585001 RAL-383 2743 chrX 14636452 14636482 chrX 14641901 14641940 I-element 9 5459 3.0 1.5 2.2 2.8 5488 chrX 14636452 intron NetA - chrX 14639196 intron NetA - chrX 14641940 intron NetA - chrX_9_14635001 chrX_14635001 RAL-383 2744 chrX 14645214 14645260 chrX 14646501 14646548 14 1286 3.5 1.5 2.5 4.0 1334 chrX 14645214 intron NetA - chrX 14645881 intron NetA - chrX 14646548 intron NetA - chrX_14_14645001 chrX_14645001 RAL-383 2745 chrX 14767923 14767974 chrX 14768023 14768073 8 99 1.0 0.0 0.5 5.3 150 chrX 14767923 intergenic not near genes chrX 14767998 intergenic not near genes chrX 14768073 intergenic not near genes chrX_8_14765001 chrX_14765001 RAL-383 2746 chrX 14778015 14778047 chrX 14782832 14782864 Doc 9 4817 4.5 6.5 5.5 1.4 4849 chrX 14778015 intergenic CG5347 + chrX 14780440 intergenic not near genes chrX 14782864 intergenic Ag5r2 - chrX_9_14780001 chrX_14780001 RAL-383 2747 chrX 14809558 14809601 chrX 14809664 14809707 16 104 3.0 4.5 3.8 3.3 149 chrX 14809558 intron rut - chrX 14809632 intron rut - chrX 14809707 intron rut - chrX_16_14805001 chrX_14805001 RAL-383 2748 chrX 14818746 14818798 chrX 14823970 14824005 copia 6 5215 2.5 2.0 2.2 1.9 5259 chrX 14818746 intron rut - chrX 14821376 intron rut - chrX 14824005 intron rut - chrX_6_14820001 chrX_14820001 RAL-383 2749 chrX 14883593 14883617 chrX 14883689 14883713 4 96 3.0 0.0 1.5 1.6 120 chrX 14883593 intron Flo2 + chrX 14883653 intron Flo2 + chrX 14883713 intron Flo2 + chrX_4_14880001 chrX_14880001 RAL-383 2750 chrX 14936840 14936890 chrX 14946117 14946167 roo 10 9277 2.5 1.5 2.0 3.3 9327 chrX 14936840 intron pdgy - chrX 14941504 intron pdgy - chrX 14946167 intron pdgy - chrX_10_14940001 chrX_14940001 RAL-383 2751 chrX 15127217 15127237 chrX 15127329 15127349 7 112 4.0 7.0 5.5 1.1 132 chrX 15127217 intron drd + chrX 15127283 intron drd + chrX 15127349 intron drd + chrX_7_15125001 chrX_15125001 RAL-383 2752 chrX 15168717 15168761 chrX 15168826 15168870 7 109 1.5 3.0 2.2 2.2 153 chrX 15168717 intergenic not near genes chrX 15168794 intergenic not near genes chrX 15168870 intergenic not near genes chrX_7_15165001 chrX_15165001 RAL-383 2753 chrX 15215435 15215467 chrX 15215579 15215611 4 144 2.0 0.5 1.2 1.8 176 chrX 15215435 intergenic not near genes chrX 15215523 intergenic not near genes chrX 15215611 intergenic not near genes chrX_4_15215001 chrX_15215001 RAL-383 2754 chrX 15287594 15287625 chrX 15287699 15287729 5 105 2.0 0.0 1.0 2.5 135 chrX 15287594 intergenic not near genes chrX 15287662 intergenic not near genes chrX 15287729 intergenic not near genes chrX_5_15285001 chrX_15285001 RAL-383 2755 chrX 15394740 15394794 chrX 15394842 15394896 14 97 3.0 3.0 3.0 3.5 156 chrX 15394740 intron Cngl - chrX 15394818 intron Cngl - chrX 15394896 intron Cngl - chrX_14_15390001 chrX_15390001 RAL-383 2756 chrX 15413061 15413079 chrX 15417356 15417401 Juan 5 4313 4.0 4.5 4.2 1.0 4340 chrX 15413061 intron Cngl - chrX 15415231 intron Cngl - chrX 15417401 intron Cngl - chrX_5_15415001 chrX_15415001 RAL-383 2757 chrX 15435698 15435704 chrX 15436149 15436157 rover 4 452 0.0 11.5 5.8 0.6 459 chrX 15435698 intron Cngl - chrX 15435928 intron Cngl - chrX 15436157 intron Cngl - chrX_4_15435001 chrX_15435001 RAL-383 2758 chrX 15565615 15565664 chrX 15565721 15565770 11 106 3.5 3.0 3.2 2.6 155 chrX 15565615 intergenic not near genes chrX 15565692 intergenic not near genes chrX 15565770 intergenic not near genes chrX_11_15565001 chrX_15565001 RAL-383 2759 chrX 15797360 15797380 chrX 15798945 15798965 5 1585 19.5 19.0 19.2 0.2 1605 chrX 15797360 exon CG32581 - chrX 15798162 exon CG32581 - chrX 15798965 intron CG32581 - chrX_5_15795001 chrX_15795001 RAL-383 2760 chrX 15796901 15796916 chrX 15799096 15799111 4 2195 15.0 24.0 19.5 0.2 2210 chrX 15796901 intergenic CG32581 - chrX 15798006 exon CG32581 - chrX 15799111 5` UTR CG32581 - chrX_4_15795001 chrX_15795001 RAL-383 2761 chrX 15939250 15939293 chrX 15939355 15939398 8 105 3.5 2.5 3.0 2.0 148 chrX 15939250 intron Stim - chrX 15939324 intron Stim - chrX 15939398 intron Stim - chrX_8_15935001 chrX_15935001 RAL-383 2762 chrX 16160286 16160302 chrX 16160376 16160398 7 95 3.5 2.0 2.8 1.8 112 chrX 16160286 intergenic not near genes chrX 16160342 intergenic not near genes chrX 16160398 intergenic not near genes chrX_7_16160001 chrX_16160001 RAL-383 2763 chrX 16295510 16295528 chrX 16295614 16295632 4 104 8.0 0.0 4.0 0.8 122 chrX 16295510 intron CG9911 - chrX 16295571 intron CG9911 - chrX 16295632 intron CG9911 - chrX_4_16295001 chrX_16295001 RAL-383 2764 chrX 16355253 16355258 chrX 16355436 16355440 4 182 5.0 1.5 3.2 1.0 187 chrX 16355253 3` UTR sl + chrX 16355346 3` UTR sl + chrX 16355440 3` UTR sl + chrX_4_16355001 chrX_16355001 RAL-383 2765 chrX 16355273 16355303 chrX 16355432 16355485 10 180 2.0 0.5 1.2 4.5 212 chrX 16355273 3` UTR sl + chrX 16355379 3` UTR sl + chrX 16355485 3` UTR sl + chrX_10_16355001 chrX_16355001 RAL-383 2766 chrX 16404330 16404380 chrX 16404446 16404496 8 115 1.0 1.5 1.2 3.6 166 chrX 16404330 intron CG9981 - chrX 16404413 intron CG9981 - chrX 16404496 5` UTR CG9981 - chrX_8_16400001 chrX_16400001 RAL-383 2767 chrX 16492647 16492677 chrX 16498226 16498269 mdg3 13 5594 7.0 7.0 7.0 1.6 5622 chrX 16492647 intron para - chrX 16495458 intron para - chrX 16498269 exon para - chrX_13_16495001 chrX_16495001 RAL-383 2768 chrX 16622282 16622290 chrX 16622380 16622386 5 96 1.0 3.0 2.0 1.7 104 chrX 16622282 intergenic not near genes chrX 16622334 intergenic not near genes chrX 16622386 intergenic not near genes chrX_5_16620001 chrX_16620001 RAL-383 2769 chrX 16650913 16650947 chrX 16651010 16651024 5 92 6.0 0.0 3.0 1.2 111 chrX 16650913 intergenic CG32573 +,CG42512 + chrX 16650968 intergenic CG32573 +,CG42512 + chrX 16651024 intergenic CG32573 +,CG42512 + chrX_5_16650001 chrX_16650001 RAL-383 2770 chrX 16681616 16681664 chrX 16681712 16681760 11 96 2.0 1.5 1.8 3.9 144 chrX 16681616 3` UTR,intron sing +,Axs - chrX 16681688 3` UTR,intron sing +,Axs - chrX 16681760 3` UTR,intron sing +,Axs - chrX_11_16680001 chrX_16680001 RAL-383 2771 chrX 16700505 16700558 chrX 16700608 16700660 8 102 0.0 2.5 1.2 3.6 155 chrX 16700505 intron,3` UTR CG4678 +,spheroide - chrX 16700582 intron,3` UTR CG4678 +,spheroide - chrX 16700660 intron,3` UTR CG4678 +,spheroide - chrX_8_16700001 chrX_16700001 RAL-383 2772 chrX 16705384 16705405 chrX 16705583 16705604 6 198 3.0 4.0 3.5 1.3 220 chrX 16705384 intron CG4678 + chrX 16705494 intron CG4678 + chrX 16705604 intron CG4678 + chrX_6_16705001 chrX_16705001 RAL-383 2773 chrX 16724516 16724557 chrX 16724739 16724784 6 221 4.5 2.5 3.5 1.3 268 chrX 16724516 intron CG32572 + chrX 16724650 intron CG32572 + chrX 16724784 intron CG32572 + chrX_6_16720001 chrX_16720001 RAL-383 2774 chrX 16815356 16815375 chrX 16815452 16815471 5 96 3.5 1.0 2.2 1.6 115 chrX 16815356 intron CG4829 + chrX 16815414 intron CG4829 + chrX 16815471 intron CG4829 + chrX_5_16815001 chrX_16815001 RAL-383 2775 chrX 16898078 16898120 chrX 16898178 16898207 8 95 1.5 1.0 1.2 3.6 129 chrX 16898078 intergenic not near genes chrX 16898142 intergenic not near genes chrX 16898207 intergenic not near genes chrX_8_16895001 chrX_16895001 RAL-383 2776 chrX 16906629 16906678 chrX 16906736 16906785 7 107 2.0 4.5 3.2 1.7 156 chrX 16906629 intron CR44754 - chrX 16906707 intron CR44754 - chrX 16906785 intron CR44754 - chrX_7_16905001 chrX_16905001 RAL-383 2777 chrX 16935996 16936027 chrX 16936427 16936465 jockey 7 435 4.0 3.0 3.5 1.6 469 chrX 16935996 intron CG4928 + chrX 16936230 intron CG4928 + chrX 16936465 intron CG4928 + chrX_7_16935001 chrX_16935001 RAL-383 2778 chrX 1053118 1053123 chrX 16983077 16983077 4 15929956 14.0 9.0 11.5 0.3 15929959 chrX 1053118 intron CR44779 + chrX 9018098 intron,intron rdgA +,CR43836 - chrX 16983077 intron CG45002 - chrX_4_9015001 chrX_9015001 RAL-383 2779 chrX 17011955 17011998 chrX 17012049 17012064 7 95 2.5 2.0 2.2 2.2 109 chrX 17011955 intron CG45002 - chrX 17012010 intron CG45002 - chrX 17012064 intron CG45002 - chrX_7_17010001 chrX_17010001 RAL-383 2780 chrX 17052913 17052921 chrX 17053013 17053022 4 101 0.0 0.5 0.2 3.3 109 chrX 17052913 intron CG45002 - chrX 17052968 intron CG45002 - chrX 17053022 intron CG45002 - chrX_4_17050001 chrX_17050001 RAL-383 2781 chrX 17089581 17089632 chrX 17089727 17089778 7 146 2.5 3.5 3.0 1.8 197 chrX 17089581 intergenic not near genes chrX 17089680 intergenic not near genes chrX 17089778 intergenic not near genes chrX_7_17085001 chrX_17085001 RAL-383 2782 chrX 17122653 17122658 chrX 17122754 17122769 6 108 1.5 4.5 3.0 1.5 116 chrX 17122653 intron CG5004 + chrX 17122711 intron CG5004 + chrX 17122769 intron CG5004 + chrX_6_17120001 chrX_17120001 RAL-383 2783 chrX 17195186 17195227 chrX 17200292 17200333 flea 6 5106 2.0 2.0 2.0 2.0 5147 chrX 17195186 3` UTR baz + chrX 17197760 3` UTR baz + chrX 17200333 3` UTR baz + chrX_6_17195001 chrX_17195001 RAL-383 2784 chrX 17205830 17205859 chrX 17205940 17205969 10 110 4.0 6.0 5.0 1.7 139 chrX 17205830 intergenic not near genes chrX 17205900 intergenic not near genes chrX 17205969 intergenic CG32564 + chrX_10_17205001 chrX_17205001 RAL-383 2785 chrX 17262172 17262194 chrX 17262278 17262293 7 105 4.0 4.5 4.2 1.3 121 chrX 17262172 intron f + chrX 17262232 intron f + chrX 17262293 intron f + chrX_7_17260001 chrX_17260001 RAL-383 2786 chrX 17316350 17316386 chrX 17316454 17316490 12 102 3.5 0.5 2.0 4.0 140 chrX 17316350 intron B-H2 + chrX 17316420 intron B-H2 + chrX 17316490 intron B-H2 + chrX_12_17315001 chrX_17315001 RAL-383 2787 chrX 17325728 17325741 chrX 17325861 17325874 6 133 0.0 5.5 2.8 1.6 146 chrX 17325728 intergenic not near genes chrX 17325801 intergenic not near genes chrX 17325874 intergenic not near genes chrX_6_17325001 chrX_17325001 RAL-383 2788 chrX 17352590 17352619 chrX 17352713 17352737 14 122 0.0 6.5 3.2 3.3 147 chrX 17352590 intergenic not near genes chrX 17352664 intergenic not near genes chrX 17352737 intergenic not near genes chrX_14_17350001 chrX_17350001 RAL-383 2789 chrX 17502330 17502364 chrX 17502430 17502464 6 100 2.5 2.5 2.5 1.7 134 chrX 17502330 intron CG43658 - chrX 17502397 intron CG43658 - chrX 17502464 intron CG43658 - chrX_6_17500001 chrX_17500001 RAL-383 2790 chrX 17544987 17545032 chrX 17545089 17545134 6 102 4.0 2.0 3.0 1.5 147 chrX 17544987 intron CG43658 - chrX 17545060 intron CG43658 - chrX 17545134 intron CG43658 - chrX_6_17545001 chrX_17545001 RAL-383 2791 chrX 17708813 17708856 chrX 17708910 17708955 5 98 3.0 1.5 2.2 1.6 142 chrX 17708813 intron CG8173 - chrX 17708884 intron CG8173 - chrX 17708955 intron CG8173 - chrX_5_17705001 chrX_17705001 RAL-383 2792 chrX 17833404 17833418 chrX 17833699 17833726 4 305 1.0 8.5 4.8 0.7 322 chrX 17833404 intron CG6398 + chrX 17833565 intron CG6398 + chrX 17833726 intron CG6398 + chrX_4_17830001 chrX_17830001 RAL-383 2793 chrX 17911834 17911870 chrX 17911942 17911950 7 104 1.0 1.5 1.2 3.2 116 chrX 17911834 intron CG6847 + chrX 17911892 intron CG6847 + chrX 17911950 intron CG6847 + chrX_7_17910001 chrX_17910001 RAL-383 2794 chrX 18022859 18022881 chrX 18022953 18022985 5 102 2.5 5.0 3.8 1.0 126 chrX 18022859 intron Sh - chrX 18022922 intron Sh - chrX 18022985 intron Sh - chrX_5_18020001 chrX_18020001 RAL-383 2795 chrX 18194057 18194100 chrX 18194612 18194655 BS 10 554 3.5 6.5 5.0 1.7 598 chrX 18194057 intron Frq2 + chrX 18194356 intron Frq2 + chrX 18194655 intron Frq2 + chrX_10_18190001 chrX_18190001 RAL-383 2796 chrX 18337409 18337454 chrX 18337528 18337574 6 120 2.0 2.5 2.2 1.9 165 chrX 18337409 intron CG6123 - chrX 18337492 intron CG6123 - chrX 18337574 intron CG6123 - chrX_6_18335001 chrX_18335001 RAL-383 2797 chrX 18429475 18429525 chrX 18434806 18434856 Transpac 13 5331 2.0 4.0 3.0 3.2 5381 chrX 18429475 intergenic not near genes chrX 18432166 intergenic not near genes chrX 18434856 intergenic not near genes chrX_13_18430001 chrX_18430001 RAL-383 2798 chrX 18441811 18441835 chrX 18441913 18441928 6 97 4.0 2.5 3.2 1.4 117 chrX 18441811 intergenic not near genes chrX 18441870 intergenic not near genes chrX 18441928 intergenic not near genes chrX_6_18440001 chrX_18440001 RAL-383 2799 chrX 18443875 18443917 chrX 18444187 18444189 9 304 1.0 4.0 2.5 2.6 314 chrX 18443875 3` UTR CG32547 - chrX 18444032 3` UTR CG32547 - chrX 18444189 3` UTR CG32547 - chrX_9_18440001 chrX_18440001 RAL-383 2800 chrX 18524353 18524374 chrX 18524436 18524473 4 95 2.5 3.5 3.0 1.0 120 chrX 18524353 intron Bx + chrX 18524413 intron Bx + chrX 18524473 intron Bx + chrX_4_18520001 chrX_18520001 RAL-383 2801 chrX 18558759 18558808 chrX 18558861 18558910 20 101 0.5 3.0 1.8 7.1 151 chrX 18558759 intron Bx + chrX 18558834 intron Bx + chrX 18558910 intron Bx + chrX_20_18555001 chrX_18555001 RAL-383 2802 chrX 12946235 12946235 chrX 18572525 18572527 8 5626290 11.0 13.0 12.0 0.6 5626292 chrX 12946235 3` UTR fne + chrX 15759381 intron Graf - chrX 18572527 intergenic not near genes chrX_8_15755001 chrX_15755001 RAL-383 2803 chrX 18645005 18645047 chrX 18645121 18645165 16 116 2.0 1.0 1.5 6.4 160 chrX 18645005 intron Rip11 - chrX 18645085 intron Rip11 - chrX 18645165 intron Rip11 - chrX_16_18645001 chrX_18645001 RAL-383 2804 chrX 18698828 18698877 chrX 18698965 18699014 10 136 3.0 4.0 3.5 2.2 186 chrX 18698828 intergenic not near genes chrX 18698921 intergenic not near genes chrX 18699014 intergenic not near genes chrX_10_18695001 chrX_18695001 RAL-383 2805 chrX 18896499 18896545 chrX 18896630 18896676 12 130 0.0 3.0 1.5 4.8 177 chrX 18896499 3` UTR CG7349 + chrX 18896588 intergenic CG7349 + chrX 18896676 intergenic CG7349 + chrX_12_18895001 chrX_18895001 RAL-383 2806 chrX 18947482 18947532 chrX 18947595 18947645 9 112 3.5 4.5 4.0 1.8 163 chrX 18947482 intron CG43759 + chrX 18947564 intron CG43759 + chrX 18947645 intron CG43759 + chrX_9_18945001 chrX_18945001 RAL-383 2807 chrX 18957053 18957100 chrX 18965736 18965783 roo 8 8683 3.5 7.0 5.2 1.3 8730 chrX 18957053 intron CG43759 + chrX 18961418 intron CG43759 + chrX 18965783 intron CG43759 + chrX_8_18960001 chrX_18960001 RAL-383 2808 chrX 19060394 19060436 chrX 19065198 19065240 Doc 9 4803 5.0 1.5 3.2 2.1 4846 chrX 19060394 intron CG14190 + chrX 19062817 intron CG14190 + chrX 19065240 intron CG14190 + chrX_9_19060001 chrX_19060001 RAL-383 2809 chrX 19073666 19073697 chrX 19073773 19073804 12 107 6.0 4.0 5.0 2.0 138 chrX 19073666 intergenic not near genes chrX 19073735 intergenic not near genes chrX 19073804 intergenic not near genes chrX_12_19070001 chrX_19070001 RAL-383 2810 chrX 19098738 19098783 chrX 19098836 19098881 8 98 2.5 3.0 2.8 2.1 143 chrX 19098738 intergenic not near genes chrX 19098810 intergenic not near genes chrX 19098881 intergenic not near genes chrX_8_19095001 chrX_19095001 RAL-383 2811 chrX 19119682 19119715 chrX 19119788 19119821 9 106 1.0 0.5 0.8 5.0 139 chrX 19119682 intergenic not near genes chrX 19119752 intergenic not near genes chrX 19119821 intergenic not near genes chrX_9_19115001 chrX_19115001 RAL-383 2812 chrX 19136541 19136581 chrX 19143480 19143520 412 8 6936 4.0 2.5 3.2 1.9 6979 chrX 19136541 intergenic not near genes chrX 19140030 intergenic not near genes chrX 19143520 3` UTR RhoGAP18B - chrX_8_19140001 chrX_19140001 RAL-383 2813 chrX 19181996 19182043 chrX 19182128 19182175 10 131 0.0 2.0 1.0 5.0 179 chrX 19181996 3` UTR CG7453 + chrX 19182086 intergenic CG7453 + chrX 19182175 intergenic CG7453 + chrX_10_19180001 chrX_19180001 RAL-383 2814 chrX 19339744 19339767 chrX 19339840 19339863 7 96 0.0 2.5 1.2 3.2 119 chrX 19339744 intron nAChRalpha7 - chrX 19339804 intron nAChRalpha7 - chrX 19339863 intron nAChRalpha7 - chrX_7_19335001 chrX_19335001 RAL-383 2815 chrX 19345404 19345451 chrX 19345504 19345536 6 98 1.5 1.0 1.2 2.7 132 chrX 19345404 intron nAChRalpha7 - chrX 19345470 intron nAChRalpha7 - chrX 19345536 intron nAChRalpha7 - chrX_6_19345001 chrX_19345001 RAL-383 2816 chrX 19356970 19357019 chrX 19358431 19358449 NOF 13 1457 5.5 0.0 2.8 3.4 1479 chrX 19356970 intron kek5 + chrX 19357710 intron kek5 + chrX 19358449 intron kek5 + chrX_13_19355001 chrX_19355001 RAL-383 2817 chrX 19380135 19380186 chrX 19380396 19380431 pogo 16 258 2.5 7.5 5.0 2.7 296 chrX 19380135 intron kek5 + chrX 19380283 intron kek5 + chrX 19380431 intron kek5 + chrX_16_19380001 chrX_19380001 RAL-383 2818 chrX 19472122 19472155 chrX 19472704 19472744 jockey 7 586 2.0 5.0 3.5 1.6 622 chrX 19472122 intergenic kek5 + chrX 19472433 intergenic not near genes chrX 19472744 intergenic not near genes chrX_7_19470001 chrX_19470001 RAL-383 2819 chrX 19541432 19541448 chrX 19541510 19541548 5 94 1.0 3.0 2.0 1.7 116 chrX 19541432 intron CG32532 - chrX 19541490 intron CG32532 - chrX 19541548 intron CG32532 - chrX_5_19540001 chrX_19540001 RAL-383 2820 chrX 19591188 19591193 chrX 19591286 19591291 6 98 0.0 0.0 0.0 6.0 103 chrX 19591188 intergenic not near genes chrX 19591240 intergenic not near genes chrX 19591291 intergenic not near genes chrX_6_19590001 chrX_19590001 RAL-383 2821 chrX 19710052 19710092 chrX 19711858 19711897 S-element 12 1804 3.5 2.5 3.0 3.0 1845 chrX 19710052 intron meso18E - chrX 19710974 intron meso18E - chrX 19711897 intron meso18E - chrX_12_19710001 chrX_19710001 RAL-383 2822 chrX 19791245 19791284 chrX 19791359 19791398 11 114 3.5 5.0 4.2 2.1 153 chrX 19791245 intergenic not near genes chrX 19791322 intergenic not near genes chrX 19791398 intergenic not near genes chrX_11_19790001 chrX_19790001 RAL-383 2823 chrX 19881434 19881485 chrX 19881535 19881586 14 98 4.5 4.5 4.5 2.5 152 chrX 19881434 intron Hers + chrX 19881510 intron Hers + chrX 19881586 intron Hers + chrX_14_19880001 chrX_19880001 RAL-383 2824 chrX 19897382 19897416 chrX 19897479 19897513 12 97 5.0 7.0 6.0 1.7 131 chrX 19897382 intron Hers + chrX 19897448 intron Hers + chrX 19897513 intron Hers + chrX_12_19895001 chrX_19895001 RAL-383 2825 chrX 19981553 19981590 chrX 19981649 19981686 5 96 1.0 3.0 2.0 1.7 133 chrX 19981553 intergenic not near genes chrX 19981620 intergenic not near genes chrX 19981686 intergenic not near genes chrX_5_19980001 chrX_19980001 RAL-383 2826 chrX 19992409 19992427 chrX 19992497 19992512 4 90 3.0 2.5 2.8 1.1 103 chrX 19992409 intergenic not near genes chrX 19992460 intergenic not near genes chrX 19992512 intergenic not near genes chrX_4_19990001 chrX_19990001 RAL-383 2827 chrX 20041511 20041558 chrX 20041611 20041653 9 99 1.0 3.5 2.2 2.8 142 chrX 20041511 intron Dop2R - chrX 20041582 intron Dop2R - chrX 20041653 intron Dop2R - chrX_9_20040001 chrX_20040001 RAL-383 2828 chrX 20065784 20065834 chrX 20065883 20065895 10 95 3.5 2.5 3.0 2.5 111 chrX 20065784 intergenic not near genes chrX 20065840 intergenic not near genes chrX 20065895 intergenic not near genes chrX_10_20065001 chrX_20065001 RAL-383 2829 chrX 20271489 20271525 chrX 20271595 20271637 5 111 1.5 0.0 0.8 2.8 148 chrX 20271489 intergenic not near genes chrX 20271563 intergenic not near genes chrX 20271637 intergenic not near genes chrX_5_20270001 chrX_20270001 RAL-383 2830 chrX 20312863 20312911 chrX 20312961 20313009 10 97 3.5 2.0 2.8 2.6 146 chrX 20312863 intron CG1504 - chrX 20312936 intron CG1504 - chrX 20313009 intron CG1504 - chrX_10_20310001 chrX_20310001 RAL-383 2831 chrX 20377329 20377340 chrX 20378808 20378827 hobo 4 1485 3.0 5.0 4.0 0.8 1498 chrX 20377329 intergenic not near genes chrX 20378078 intergenic not near genes chrX 20378827 intergenic not near genes chrX_4_20375001 chrX_20375001 RAL-383 2832 chrX 20383753 20383791 chrX 20383852 20383884 10 107 3.5 4.0 3.8 2.1 131 chrX 20383753 intergenic not near genes chrX 20383818 intergenic not near genes chrX 20383884 intergenic not near genes chrX_10_20380001 chrX_20380001 RAL-383 2833 chrX 20427123 20427138 chrX 20427270 20427285 4 147 34.0 31.5 32.8 0.1 162 chrX 20427123 intergenic CG15456 -,CG11710 - chrX 20427204 intergenic CG15456 -,CG11710 - chrX 20427285 intergenic CG11710 -,CG15456 - chrX_4_20425001 chrX_20425001 RAL-383 2834 chrX 20426182 20426203 chrX 20428382 20428406 6 2201 28.0 14.5 21.2 0.3 2224 chrX 20426182 exon cactin + chrX 20427294 intergenic CG11710 -,CG15456 - chrX 20428406 exon CG11710 - chrX_6_20425001 chrX_20425001 RAL-383 2835 chrX 20443160 20443196 chrX 20443256 20443292 5 95 5.5 4.0 4.8 0.9 132 chrX 20443160 exon CG1695 + chrX 20443226 intron CG1695 + chrX 20443292 intron CG1695 + chrX_5_20440001 chrX_20440001 RAL-383 2836 chrX 20493911 20493929 chrX 20494092 20494110 6 181 0.0 6.5 3.2 1.4 199 chrX 20493911 intron RhoGAP19D - chrX 20494010 intron RhoGAP19D - chrX 20494110 intron RhoGAP19D - chrX_6_20490001 chrX_20490001 RAL-383 2837 chrX 20528584 20528627 chrX 20528952 20528992 10 367 3.5 5.5 4.5 1.8 408 chrX 20528584 intergenic not near genes chrX 20528788 intergenic not near genes chrX 20528992 intergenic not near genes chrX_10_20525001 chrX_20525001 RAL-383 2838 chrX 20531676 20531686 chrX 20531786 20531796 6 110 1.0 6.5 3.8 1.2 120 chrX 20531676 intergenic not near genes chrX 20531736 intergenic not near genes chrX 20531796 intergenic not near genes chrX_6_20530001 chrX_20530001 RAL-383 2839 chrX 20546540 20546562 chrX 20546726 20546748 5 185 1.0 4.5 2.8 1.3 208 chrX 20546540 intron RunxB + chrX 20546644 intron RunxB + chrX 20546748 intron RunxB + chrX_5_20545001 chrX_20545001 RAL-383 2840 chrX 20575135 20575183 chrX 20575233 20575281 13 93 1.5 0.5 1.0 6.5 146 chrX 20575135 intergenic CG42580 + chrX 20575208 intergenic not near genes chrX 20575281 intergenic not near genes chrX_13_20575001 chrX_20575001 RAL-383 2841 chrX 20642648 20642667 chrX 20643641 20643661 6 993 3.0 1.5 2.2 1.9 1013 chrX 20642648 intergenic not near genes chrX 20643154 intergenic not near genes chrX 20643661 intergenic not near genes chrX_6_20640001 chrX_20640001 RAL-383 2842 chrX 20710412 20710442 chrX 20710510 20710540 5 97 1.0 4.0 2.5 1.4 128 chrX 20710412 intergenic not near genes chrX 20710476 intergenic not near genes chrX 20710540 intergenic not near genes chrX_5_20710001 chrX_20710001 RAL-383 2843 chrX 20741565 20741591 chrX 20741661 20741687 11 93 6.5 0.0 3.2 2.6 122 chrX 20741565 intergenic not near genes chrX 20741626 intergenic not near genes chrX 20741687 intergenic not near genes chrX_11_20740001 chrX_20740001 RAL-383 2844 chrX 20783992 20784038 chrX 20784124 20784170 11 128 2.0 3.5 2.8 2.9 178 chrX 20783992 intron shakB - chrX 20784081 intron shakB - chrX 20784170 intron shakB - chrX_11_20780001 chrX_20780001 RAL-383 2845 chrX 20836707 20836755 chrX 20844328 20844374 roo 7 7620 2.5 3.0 2.8 1.8 7667 chrX 20836707 intron shakB - chrX 20840540 intron shakB - chrX 20844374 intron shakB - chrX_7_20840001 chrX_20840001 RAL-383 2846 chrX 20940719 20940753 chrX 20942197 20942211 hobo 5 1476 2.0 2.5 2.2 1.6 1492 chrX 20940719 intergenic not near genes chrX 20941465 intergenic not near genes chrX 20942211 intergenic not near genes chrX_5_20940001 chrX_20940001 RAL-383 2847 chrX 20974180 20974203 chrX 20974384 20974407 5 204 2.5 2.0 2.2 1.6 227 chrX 20974180 intergenic not near genes chrX 20974294 intergenic not near genes chrX 20974407 intergenic not near genes chrX_5_20970001 chrX_20970001 RAL-383 2848 chrX 20978085 20978125 chrX 20978223 20978263 6 138 3.5 3.0 3.2 1.4 178 chrX 20978085 intergenic CG44426 + chrX 20978174 intergenic CG44426 + chrX 20978263 intergenic CG44426 + chrX_6_20975001 chrX_20975001 RAL-383 2849 chrX 21009827 21009844 chrX 21009955 21009972 5 128 3.0 4.5 3.8 1.0 145 chrX 21009827 intergenic not near genes chrX 21009900 intergenic not near genes chrX 21009972 intergenic not near genes chrX_5_21005001 chrX_21005001 RAL-383 2850 chrX 21049236 21049250 chrX 21049336 21049350 8 100 4.5 3.0 3.8 1.7 114 chrX 21049236 intergenic Cbs + chrX 21049293 intergenic Cbs + chrX 21049350 intergenic Cbs + chrX_8_21045001 chrX_21045001 RAL-383 2851 chrX 21049737 21049754 chrX 21049841 21049858 4 102 0.5 4.0 2.2 1.2 121 chrX 21049737 intergenic CG1518 - chrX 21049798 intergenic CG1518 - chrX 21049858 intergenic CG1518 - chrX_4_21045001 chrX_21045001 RAL-383 2852 chrX 21055675 21055724 chrX 21055771 21055820 8 96 1.0 2.0 1.5 3.2 145 chrX 21055675 intron bves + chrX 21055748 intron bves + chrX 21055820 intron bves + chrX_8_21055001 chrX_21055001 RAL-383 2853 chrX 21061857 21061880 chrX 21062362 21062385 roo 6 504 2.5 4.0 3.2 1.4 528 chrX 21061857 intron bves + chrX 21062121 intron bves + chrX 21062385 intron,3` UTR bves +,CG32512 - chrX_6_21060001 chrX_21060001 RAL-383 2854 chrX 21076306 21076354 chrX 21076405 21076453 11 98 5.0 0.0 2.5 3.1 147 chrX 21076306 intron bves + chrX 21076380 intron bves + chrX 21076453 intron bves + chrX_11_21075001 chrX_21075001 RAL-383 2855 chrX 21086116 21086157 chrX 21087160 21087206 jockey 11 1044 2.0 3.5 2.8 2.9 1090 chrX 21086116 intergenic not near genes chrX 21086661 intergenic not near genes chrX 21087206 intergenic not near genes chrX_11_21085001 chrX_21085001 RAL-383 2856 chrX 21088022 21088066 chrX 21088174 21088218 7 152 2.5 2.0 2.2 2.2 196 chrX 21088022 intergenic not near genes chrX 21088120 intergenic not near genes chrX 21088218 intergenic not near genes chrX_7_21085001 chrX_21085001 RAL-383 2857 chrX 21190562 21190823 chrX 21190695 21190916 6 116 0.5 0.0 0.2 5.0 354 chrX 21190562 intergenic not near genes chrX 21190739 intergenic not near genes chrX 21190916 intergenic not near genes chrX_6_21190001 chrX_21190001 RAL-383 2858 chrX 21308902 21308922 chrX 21309024 21309045 4 123 0.0 2.0 1.0 2.0 143 chrX 21308902 intron CG1801 - chrX 21308974 intron CG1801 - chrX 21309045 intron CG1801 - chrX_4_21305001 chrX_21305001 RAL-383 2859 chrX 21323899 21323942 chrX 21324001 21324029 7 97 3.0 3.5 3.2 1.7 130 chrX 21323899 5` UTR Dd - chrX 21323964 5` UTR Dd - chrX 21324029 intergenic CG1486 +,Dd - chrX_7_21320001 chrX_21320001 RAL-383 2860 chrX 21328103 21328148 chrX 21328234 21328279 11 131 5.5 2.0 3.8 2.3 176 chrX 21328103 3` UTR CG1486 + chrX 21328191 intergenic CG1486 +,tty - chrX 21328279 intergenic CG1486 +,tty - chrX_11_21325001 chrX_21325001 RAL-383 2861 chrX 21410633 21410675 chrX 21410732 21410774 12 99 0.0 4.5 2.2 3.8 141 chrX 21410633 intergenic CR45003 - chrX 21410704 intergenic CR45003 - chrX 21410774 intergenic CR45003 - chrX_12_21410001 chrX_21410001 RAL-383 2862 chrX 21458687 21458717 chrX 21464143 21464173 Ivk 6 5456 5.5 5.0 5.2 1.0 5486 chrX 21458687 intergenic not near genes chrX 21461430 intergenic not near genes chrX 21464173 intergenic not near genes chrX_6_21460001 chrX_21460001 RAL-383 2863 chrX 21492265 21492301 chrX 21492398 21492434 9 132 4.0 3.5 3.8 1.9 169 chrX 21492265 intergenic not near genes chrX 21492350 intergenic not near genes chrX 21492434 intergenic not near genes chrX_9_21490001 chrX_21490001 RAL-383 2864 chrX 21565394 21565438 chrX 21565492 21565536 9 98 4.0 1.0 2.5 2.6 142 chrX 21565394 intergenic not near genes chrX 21565465 intergenic not near genes chrX 21565536 intergenic not near genes chrX_9_21565001 chrX_21565001 RAL-383 2865 chrX 21575533 21575558 chrX 21575632 21575657 11 96 3.5 4.0 3.8 2.3 124 chrX 21575533 intergenic not near genes chrX 21575595 intergenic not near genes chrX 21575657 intergenic not near genes chrX_11_21575001 chrX_21575001 RAL-383 2866 chrX 21581541 21581564 chrX 21581641 21581665 7 100 0.5 0.0 0.2 5.8 124 chrX 21581541 intergenic not near genes chrX 21581603 intergenic not near genes chrX 21581665 intergenic not near genes chrX_7_21580001 chrX_21580001 RAL-383 2867 chrX 21668238 21668285 chrX 21668343 21668390 10 102 26.0 25.5 25.8 0.4 152 chrX 21668238 intergenic not near genes chrX 21668314 intergenic not near genes chrX 21668390 intergenic not near genes chrX_10_21665001 chrX_21665001 RAL-383 2868 chrX 22478873 22478897 chrX 22479026 22479050 10 153 0.0 6.5 3.2 2.4 177 chrX 22478873 intron CG12576 - chrX 22478962 intron CG12576 - chrX 22479050 intron CG12576 - chrX_10_22475001 chrX_22475001 RAL-383 2869 chrX 22564566 22564586 chrX 22575118 22575147 jockey 4 10554 9.5 6.0 7.8 0.5 10581 chrX 22564566 intergenic not near genes chrX 22569856 intergenic not near genes chrX 22575147 intergenic not near genes chrX_4_22565001 chrX_22565001 RAL-383 2870 chrX 22681465 22681480 chrX 22688940 22688956 HMS-Beagle2 4 7475 5.5 4.0 4.8 0.7 7491 chrX 22681465 intron CR44997 + chrX 22685210 intron CR44997 + chrX 22688956 intron CR44997 + chrX_4_22685001 chrX_22685001 RAL-383 2871 chrX 22694307 22694349 chrX 22694417 22694460 4 111 1.5 2.0 1.8 1.4 153 chrX 22694307 intron CR44997 + chrX 22694384 intron CR44997 + chrX 22694460 intron CR44997 + chrX_4_22690001 chrX_22690001 RAL-383 2872 chrX 22697483 22697522 chrX 22701800 22701839 Juan 16 4315 5.0 4.0 4.5 2.9 4356 chrX 22697483 intron CR44997 + chrX 22699661 intron CR44997 + chrX 22701839 intron CR44997 + chrX_16_22695001 chrX_22695001 RAL-383 2873 chrX 22764363 22764398 chrX 22764478 22764512 8 116 3.5 4.0 3.8 1.7 149 chrX 22764363 intron CR44997 + chrX 22764438 intron CR44997 + chrX 22764512 intron CR44997 + chrX_8_22760001 chrX_22760001 RAL-383 2874 chrX 22771499 22771531 chrX 22774797 22774842 297 7 3304 3.0 4.5 3.8 1.5 3343 chrX 22771499 intron CR44997 + chrX 22773170 intron CR44997 + chrX 22774842 intron CR44997 + chrX_7_22770001 chrX_22770001 RAL-383 2875 chrX 22798767 22798786 chrX 22798889 22798923 6 132 3.0 1.5 2.2 1.9 156 chrX 22798767 intergenic not near genes chrX 22798845 intergenic not near genes chrX 22798923 intergenic not near genes chrX_6_22795001 chrX_22795001 RAL-383 2876 chrX 22811981 22811998 chrX 22816774 22816791 F-element 8 4792 6.5 5.5 6.0 1.1 4810 chrX 22811981 intergenic CG12446 - chrX 22814386 intergenic not near genes chrX 22816791 intergenic not near genes chrX_8_22810001 chrX_22810001 RAL-383 2877 chrX 22835939 22835986 chrX 22836040 22836093 10 96 2.5 1.5 2.0 3.3 154 chrX 22835939 intron,intron fog -,CG42346 + chrX 22836016 intron,intron fog -,CG42346 + chrX 22836093 intron,intron fog -,CG42346 + chrX_10_22835001 chrX_22835001 RAL-383 2878 chrX 22867968 22868003 chrX 22868102 22868145 5 136 3.0 0.0 1.5 2.0 177 chrX 22867968 exon CG42346 + chrX 22868056 intron CG42346 + chrX 22868145 intron CG42346 + chrX_5_22865001 chrX_22865001 RAL-383 2879 chrX 22870855 22870899 chrX 22870966 22871008 10 103 3.0 3.0 3.0 2.5 153 chrX 22870855 intron,3` UTR CG42346 +,CR43656 - chrX 22870932 intron,3` UTR CG42346 +,CR43656 - chrX 22871008 intron,3` UTR CG42346 +,CR43656 - chrX_10_22870001 chrX_22870001 RAL-383 2880 chrX 22987086 22987134 chrX 22989765 22989795 Burdock 7 2675 2.5 3.0 2.8 1.8 2709 chrX 22987086 intron,intron stnA -,stnB - chrX 22988440 intron,intron stnA -,stnB - chrX 22989795 intron,intron stnA -,stnB - chrX_7_22985001 chrX_22985001 RAL-383 2881 chrX 22996295 22996333 chrX 23003549 23003587 roo 12 7254 4.0 5.5 4.8 2.1 7292 chrX 22996295 intron,intron stnA -,stnB - chrX 22999941 intron,intron stnA -,stnB - chrX 23003587 intron,intron stnA -,stnB - chrX_12_22995001 chrX_22995001 RAL-383 2882 chrY 975806 975820 chrY 975872 976005 5 107 98.0 119.0 108.5 0.0 199 chrY 975806 intergenic not near genes chrY 975906 intergenic not near genes chrY 976005 intergenic not near genes chrY_5_975001 chrY_975001 RAL-383 2883 chrY 1419893 1419918 chrY 1420167 1420192 4 274 12.5 9.0 10.8 0.3 299 chrY 1419893 intergenic not near genes chrY 1420042 intergenic not near genes chrY 1420192 intergenic not near genes chrY_4_1420001 chrY_1420001 RAL-383