SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 46303 46384 chr2L 46430 46512 39 127 11.0 13.5 12.2 3.0 209 chr2L 46303 intron Cda5 - chr2L 46408 intron Cda5 - chr2L 46512 intron Cda5 - chr2L_39_45001 chr2L_45001 RAL-382 2 chr2L 47423 47464 chr2L 52574 52618 jockey 18 5155 19.0 11.0 15.0 1.1 5195 chr2L 47423 intron Cda5 - chr2L 50020 intron Cda5 - chr2L 52618 intron Cda5 - chr2L_18_50001 chr2L_50001 RAL-382 3 chr2L 47465 47486 chr2L 52562 52600 jockey 13 5137 14.0 6.5 10.2 1.2 5135 chr2L 47465 intron Cda5 - chr2L 50032 intron Cda5 - chr2L 52600 intron Cda5 - chr2L_13_50001 chr2L_50001 RAL-382 4 chr2L 62027 62097 chr2L 62234 62311 33 209 68.5 65.5 67.0 0.5 284 chr2L 62027 intron Cda5 - chr2L 62169 intron Cda5 - chr2L 62311 intron Cda5 - chr2L_33_60001 chr2L_60001 RAL-382 5 chr2L 79784 79860 chr2L 80178 80254 34 390 6.5 7.0 6.8 4.4 470 chr2L 79784 intergenic not near genes chr2L 80019 intergenic not near genes chr2L 80254 intergenic not near genes chr2L_34_80001 chr2L_80001 RAL-382 6 chr2L 89672 89691 chr2L 89799 89800 11 125 18.5 11.0 14.8 0.7 128 chr2L 89672 intergenic not near genes chr2L 89736 intergenic not near genes chr2L 89800 intergenic not near genes chr2L_11_85001 chr2L_85001 RAL-382 7 chr2L 89693 89743 chr2L 89797 89852 26 122 10.5 9.5 10.0 2.4 159 chr2L 89693 intergenic not near genes chr2L 89772 intergenic not near genes chr2L 89852 intergenic not near genes chr2L_26_85001 chr2L_85001 RAL-382 8 chr2L 172015 172084 chr2L 172140 172199 29 130 7.0 7.0 7.0 3.6 184 chr2L 172015 intron spen + chr2L 172107 intron spen + chr2L 172199 intron spen + chr2L_29_170001 chr2L_170001 RAL-382 9 chr2L 263277 263319 chr2L 263457 263515 19 195 11.5 10.0 10.8 1.6 238 chr2L 263277 intron,3` UTR CG3645 -,CG17075 - chr2L 263396 intron,3` UTR CG3645 -,CG17075 - chr2L 263515 intron,3` UTR CG3645 -,CG17075 - chr2L_19_260001 chr2L_260001 RAL-382 10 chr2L 276558 276563 chr2L 276652 276680 5 122 9.0 16.0 12.5 0.4 122 chr2L 276558 intron CG17078 - chr2L 276619 intron CG17078 - chr2L 276680 intron CG17078 - chr2L_5_275001 chr2L_275001 RAL-382 11 chr2L 297642 297712 chr2L 297792 297855 26 147 11.0 6.5 8.8 2.7 213 chr2L 297642 intergenic Hop +,Pi3K21B + chr2L 297748 intergenic Pi3K21B +,Hop + chr2L 297855 intergenic Pi3K21B +,Hop + chr2L_26_295001 chr2L_295001 RAL-382 12 chr2L 325090 325127 chr2L 325217 325248 16 123 9.0 12.5 10.8 1.4 158 chr2L 325090 intron Plc21C + chr2L 325169 intron Plc21C + chr2L 325248 intron Plc21C + chr2L_16_325001 chr2L_325001 RAL-382 13 chr2L 325129 325145 chr2L 325216 325253 8 112 7.5 12.5 10.0 0.7 124 chr2L 325129 intron Plc21C + chr2L 325191 intron Plc21C + chr2L 325253 intron Plc21C + chr2L_8_325001 chr2L_325001 RAL-382 14 chr2L 347840 347903 chr2L 355385 355453 blood 29 7548 8.0 5.5 6.8 3.7 7613 chr2L 347840 3` UTR Plc21C + chr2L 351646 intron Plc21C + chr2L 355453 3` UTR Plc21C + chr2L_29_350001 chr2L_350001 RAL-382 15 chr2L 371392 371452 chr2L 371521 371581 24 128 9.5 13.0 11.2 2.0 189 chr2L 371392 intergenic not near genes chr2L 371486 intergenic not near genes chr2L 371581 intergenic not near genes chr2L_24_370001 chr2L_370001 RAL-382 16 chr2L 391657 391696 chr2L 391765 391787 4 106 24.0 24.0 24.0 0.2 130 chr2L 391657 intergenic not near genes chr2L 391722 intergenic not near genes chr2L 391787 intergenic not near genes chr2L_4_390001 chr2L_390001 RAL-382 17 chr2L 407902 407970 chr2L 408033 408101 31 131 10.5 9.5 10.0 2.8 199 chr2L 407902 3` UTR RpI135 + chr2L 408002 intergenic AP-2alpha -,RpI135 + chr2L 408101 3` UTR AP-2alpha - chr2L_31_405001 chr2L_405001 RAL-382 18 chr2L 604992 605034 chr2L 605104 605129 14 124 0.0 5.0 2.5 4.0 137 chr2L 604992 intergenic not near genes chr2L 605060 intergenic not near genes chr2L 605129 intergenic not near genes chr2L_14_605001 chr2L_605001 RAL-382 19 chr2L 680695 680710 chr2L 680901 680916 5 206 9.5 9.5 9.5 0.5 221 chr2L 680695 intron ds - chr2L 680806 intron ds - chr2L 680916 intron ds - chr2L_5_680001 chr2L_680001 RAL-382 20 chr2L 686922 686923 chr2L 695981 696013 roo 4 9082 8.0 11.5 9.8 0.4 9091 chr2L 686922 intron ds - chr2L 691468 intron ds - chr2L 696013 intron ds - chr2L_4_690001 chr2L_690001 RAL-382 21 chr2L 686924 686941 chr2L 695968 696031 roo 7 9083 8.0 8.5 8.2 0.8 9107 chr2L 686924 intron ds - chr2L 691478 intron ds - chr2L 696031 intron ds - chr2L_7_690001 chr2L_690001 RAL-382 22 chr2L 702106 702146 chr2L 702257 702297 9 149 5.5 7.5 6.5 1.2 191 chr2L 702106 intron ds - chr2L 702202 intron ds - chr2L 702297 intron ds - chr2L_9_700001 chr2L_700001 RAL-382 23 chr2L 763547 763622 chr2L 763673 763716 22 117 5.0 6.5 5.8 3.2 169 chr2L 763547 intergenic not near genes chr2L 763632 intergenic not near genes chr2L 763716 intergenic not near genes chr2L_22_760001 chr2L_760001 RAL-382 24 chr2L 770434 770492 chr2L 772250 772322 Bari1 24 1822 9.0 5.5 7.2 2.9 1888 chr2L 770434 intergenic not near genes chr2L 771378 intergenic not near genes chr2L 772322 intergenic CR44614 + chr2L_24_770001 chr2L_770001 RAL-382 25 chr2L 791404 791481 chr2L 791547 791625 34 143 5.5 11.5 8.5 3.6 221 chr2L 791404 intergenic not near genes chr2L 791514 intergenic not near genes chr2L 791625 intergenic not near genes chr2L_34_790001 chr2L_790001 RAL-382 26 chr2L 849421 849487 chr2L 849562 849628 28 140 7.0 11.0 9.0 2.8 207 chr2L 849421 intron drongo - chr2L 849524 intron drongo - chr2L 849628 intron drongo - chr2L_28_845001 chr2L_845001 RAL-382 27 chr2L 877805 877873 chr2L 877936 877983 20 126 4.0 7.5 5.8 2.9 178 chr2L 877805 3` UTR,exon CG15824 -,ninaA + chr2L 877894 3` UTR,intron CG15824 -,ninaA + chr2L 877983 3` UTR,exon CG15824 -,ninaA + chr2L_20_875001 chr2L_875001 RAL-382 28 chr2L 927853 927883 chr2L 928040 928085 11 198 8.0 14.5 11.2 0.9 232 chr2L 927853 intron CG4341 + chr2L 927969 intron CG4341 + chr2L 928085 intron CG4341 + chr2L_11_925001 chr2L_925001 RAL-382 29 chr2L 964519 964574 chr2L 964653 964690 21 133 8.0 4.0 6.0 3.0 171 chr2L 964519 intergenic not near genes chr2L 964604 intergenic not near genes chr2L 964690 intergenic not near genes chr2L_21_960001 chr2L_960001 RAL-382 30 chr2L 971861 971933 chr2L 972002 972064 14 134 6.5 4.5 5.5 2.2 203 chr2L 971861 intergenic not near genes chr2L 971962 intergenic not near genes chr2L 972064 intergenic not near genes chr2L_14_970001 chr2L_970001 RAL-382 31 chr2L 976839 976913 chr2L 984525 984599 roo 23 7685 11.0 6.5 8.8 2.3 7760 chr2L 976839 intergenic not near genes chr2L 980719 intergenic not near genes chr2L 984599 intergenic not near genes chr2L_23_980001 chr2L_980001 RAL-382 32 chr2L 996699 996708 chr2L 1005844 1005853 roo 5 9145 6.5 4.5 5.5 0.8 9154 chr2L 996699 intergenic not near genes chr2L 1001276 intergenic not near genes chr2L 1005853 intergenic not near genes chr2L_5_1000001 chr2L_1000001 RAL-382 33 chr2L 1027579 1027612 chr2L 1027707 1027740 15 127 9.0 6.0 7.5 1.8 161 chr2L 1027579 intron IA-2 - chr2L 1027660 intron IA-2 - chr2L 1027740 intron IA-2 - chr2L_15_1025001 chr2L_1025001 RAL-382 34 chr2L 1028816 1028836 chr2L 1028964 1028969 4 141 13.0 13.0 13.0 0.3 153 chr2L 1028816 intron IA-2 - chr2L 1028892 intron IA-2 - chr2L 1028969 intron IA-2 - chr2L_4_1025001 chr2L_1025001 RAL-382 35 chr2L 1028840 1028850 chr2L 1028950 1029000 6 123 9.5 12.0 10.8 0.5 160 chr2L 1028840 intron IA-2 - chr2L 1028920 intron IA-2 - chr2L 1029000 intron IA-2 - chr2L_6_1025001 chr2L_1025001 RAL-382 36 chr2L 1028859 1028870 chr2L 1028947 1028985 5 117 3.0 10.5 6.8 0.6 126 chr2L 1028859 intron IA-2 - chr2L 1028922 intron IA-2 - chr2L 1028985 intron IA-2 - chr2L_5_1025001 chr2L_1025001 RAL-382 37 chr2L 1035516 1035593 chr2L 1035643 1035688 24 126 14.0 7.5 10.8 2.0 172 chr2L 1035516 intron IA-2 - chr2L 1035602 intron IA-2 - chr2L 1035688 intron IA-2 - chr2L_24_1035001 chr2L_1035001 RAL-382 38 chr2L 1041038 1041107 chr2L 1041237 1041306 31 198 8.0 0.0 4.0 6.2 268 chr2L 1041038 intron IA-2 - chr2L 1041172 intron IA-2 - chr2L 1041306 intron IA-2 - chr2L_31_1040001 chr2L_1040001 RAL-382 39 chr2L 1042575 1042584 chr2L 1042702 1042705 4 125 3.0 0.0 1.5 1.6 130 chr2L 1042575 intron IA-2 - chr2L 1042640 intron IA-2 - chr2L 1042705 intron IA-2 - chr2L_4_1040001 chr2L_1040001 RAL-382 40 chr2L 1094204 1094244 chr2L 1094329 1094370 29 126 22.0 0.5 11.2 2.4 166 chr2L 1094204 intron CG4629 - chr2L 1094287 intron CG4629 - chr2L 1094370 intron CG4629 - chr2L_29_1090001 chr2L_1090001 RAL-382 41 chr2L 1156816 1156893 chr2L 1156966 1157048 17 153 8.5 5.5 7.0 2.1 232 chr2L 1156816 intron capt - chr2L 1156932 intron capt - chr2L 1157048 intron capt - chr2L_17_1155001 chr2L_1155001 RAL-382 42 chr2L 1220088 1220113 chr2L 1227604 1227629 blood 12 7516 17.5 7.5 12.5 0.9 7541 chr2L 1220088 intron CG42329 + chr2L 1223858 intron CG42329 + chr2L 1227629 intron CG42329 + chr2L_12_1220001 chr2L_1220001 RAL-382 43 chr2L 1220121 1220140 chr2L 1227602 1227656 blood 10 7511 10.5 7.5 9.0 1.0 7535 chr2L 1220121 intron CG42329 + chr2L 1223888 intron CG42329 + chr2L 1227656 intron CG42329 + chr2L_10_1220001 chr2L_1220001 RAL-382 44 chr2L 1220142 1220156 chr2L 1227598 1227672 blood 7 7507 9.0 7.5 8.2 0.8 7530 chr2L 1220142 intron CG42329 + chr2L 1223907 intron CG42329 + chr2L 1227672 intron CG42329 + chr2L_7_1220001 chr2L_1220001 RAL-382 45 chr2L 1321980 1322050 chr2L 1322119 1322154 35 136 6.0 11.0 8.5 3.7 174 chr2L 1321980 intergenic not near genes chr2L 1322067 intergenic not near genes chr2L 1322154 intergenic not near genes chr2L_35_1320001 chr2L_1320001 RAL-382 46 chr2L 1336889 1336954 chr2L 1337182 1337247 30 291 10.0 11.0 10.5 2.6 358 chr2L 1336889 intergenic not near genes chr2L 1337068 intergenic not near genes chr2L 1337247 intergenic not near genes chr2L_30_1335001 chr2L_1335001 RAL-382 47 chr2L 1343485 1343557 chr2L 1343728 1343800 26 243 9.0 12.0 10.5 2.3 315 chr2L 1343485 exon CG33922 - chr2L 1343642 intron CG33922 - chr2L 1343800 exon CG33922 - chr2L_26_1340001 chr2L_1340001 RAL-382 48 chr2L 1529012 1529084 chr2L 1529153 1529225 14 141 7.0 3.5 5.2 2.3 213 chr2L 1529012 intergenic not near genes chr2L 1529118 intergenic not near genes chr2L 1529225 intergenic not near genes chr2L_14_1525001 chr2L_1525001 RAL-382 49 chr2L 1570645 1570713 chr2L 1573567 1573635 F-element 23 2922 9.0 6.0 7.5 2.7 2990 chr2L 1570645 intron haf + chr2L 1572140 intron haf + chr2L 1573635 intron haf + chr2L_23_1570001 chr2L_1570001 RAL-382 50 chr2L 1590918 1590990 chr2L 1591044 1591116 29 123 8.0 6.0 7.0 3.6 198 chr2L 1590918 intron haf + chr2L 1591017 intron haf + chr2L 1591116 intron haf + chr2L_29_1590001 chr2L_1590001 RAL-382 51 chr2L 1618216 1618231 chr2L 1618596 1618611 jockey 6 380 8.5 3.0 5.8 0.9 395 chr2L 1618216 intergenic CR44603 - chr2L 1618414 intergenic CR44603 - chr2L 1618611 intergenic CR44603 - chr2L_6_1615001 chr2L_1615001 RAL-382 52 chr2L 1634726 1634761 chr2L 1634853 1634884 12 129 13.0 18.0 15.5 0.7 158 chr2L 1634726 intergenic not near genes chr2L 1634805 intergenic not near genes chr2L 1634884 intergenic not near genes chr2L_12_1630001 chr2L_1630001 RAL-382 53 chr2L 1635346 1635428 chr2L 1635531 1635614 58 185 13.0 13.0 13.0 4.1 268 chr2L 1635346 intergenic not near genes chr2L 1635480 intergenic not near genes chr2L 1635614 intergenic not near genes chr2L_58_1635001 chr2L_1635001 RAL-382 54 chr2L 1661973 1662032 chr2L 1662108 1662175 24 139 9.5 2.0 5.8 3.5 202 chr2L 1661973 intron chinmo + chr2L 1662074 intron chinmo + chr2L 1662175 intron chinmo + chr2L_24_1660001 chr2L_1660001 RAL-382 55 chr2L 1678929 1678993 chr2L 1686444 1686508 blood 31 7515 9.5 7.5 8.5 3.3 7579 chr2L 1678929 intron chinmo + chr2L 1682718 intron chinmo + chr2L 1686508 intron chinmo + chr2L_31_1680001 chr2L_1680001 RAL-382 56 chr2L 1692028 1692093 chr2L 1692159 1692224 24 129 0.0 5.5 2.8 6.3 196 chr2L 1692028 intron chinmo + chr2L 1692126 intron chinmo + chr2L 1692224 intron chinmo + chr2L_24_1690001 chr2L_1690001 RAL-382 57 chr2L 1699221 1699280 chr2L 1699348 1699413 21 129 0.0 10.0 5.0 3.5 192 chr2L 1699221 3` UTR chinmo + chr2L 1699317 3` UTR chinmo + chr2L 1699413 3` UTR chinmo + chr2L_21_1695001 chr2L_1695001 RAL-382 58 chr2L 1711309 1711380 chr2L 1711683 1711754 mdg3 21 370 10.5 5.0 7.8 2.4 445 chr2L 1711309 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711532 3` UTR frtz - chr2L 1711754 exon frtz - chr2L_21_1710001 chr2L_1710001 RAL-382 59 chr2L 1721809 1721855 chr2L 1721938 1721989 19 133 0.0 7.0 3.5 4.2 180 chr2L 1721809 intron Rim2 - chr2L 1721899 intron Rim2 - chr2L 1721989 intron Rim2 - chr2L_19_1720001 chr2L_1720001 RAL-382 60 chr2L 1724765 1724828 chr2L 1724897 1724941 32 130 7.0 9.0 8.0 3.6 176 chr2L 1724765 intergenic Eno -,Rim2 - chr2L 1724853 3` UTR Eno - chr2L 1724941 3` UTR Eno - chr2L_32_1720001 chr2L_1720001 RAL-382 61 chr2L 1743877 1743893 chr2L 1744004 1744014 8 126 22.5 6.5 14.5 0.5 137 chr2L 1743877 intron CG17646 + chr2L 1743946 intron CG17646 + chr2L 1744014 intron CG17646 + chr2L_8_1740001 chr2L_1740001 RAL-382 62 chr2L 1924374 1924404 chr2L 1924506 1924506 16 128 19.5 5.5 12.5 1.2 132 chr2L 1924374 intron CG7337 + chr2L 1924440 intron CG7337 + chr2L 1924506 intron CG7337 + chr2L_16_1920001 chr2L_1920001 RAL-382 63 chr2L 1924412 1924451 chr2L 1924502 1924589 10 130 8.0 5.0 6.5 1.3 177 chr2L 1924412 intron CG7337 + chr2L 1924500 intron CG7337 + chr2L 1924589 intron CG7337 + chr2L_10_1920001 chr2L_1920001 RAL-382 64 chr2L 1957903 1957946 chr2L 1958008 1958037 16 127 8.0 9.0 8.5 1.7 134 chr2L 1957903 intron erm - chr2L 1957970 intron erm - chr2L 1958037 intron erm - chr2L_16_1955001 chr2L_1955001 RAL-382 65 chr2L 1993152 1993225 chr2L 1993288 1993345 25 133 5.5 7.5 6.5 3.3 193 chr2L 1993152 intergenic not near genes chr2L 1993248 intergenic not near genes chr2L 1993345 intergenic not near genes chr2L_25_1990001 chr2L_1990001 RAL-382 66 chr2L 2007838 2007872 chr2L 2007996 2008030 16 158 6.5 19.5 13.0 1.1 192 chr2L 2007838 intergenic CR45712 + chr2L 2007934 intergenic CR45712 +,Nplp4 + chr2L 2008030 intergenic CR45712 +,Nplp4 + chr2L_16_2005001 chr2L_2005001 RAL-382 67 chr2L 2061620 2061638 chr2L 2061746 2061764 6 126 5.5 7.5 6.5 0.8 144 chr2L 2061620 intron dpr3 - chr2L 2061692 intron dpr3 - chr2L 2061764 intron dpr3 - chr2L_6_2060001 chr2L_2060001 RAL-382 68 chr2L 2073316 2073326 chr2L 2073439 2073459 6 128 14.5 8.0 11.2 0.5 143 chr2L 2073316 intron dpr3 - chr2L 2073388 intron dpr3 - chr2L 2073459 intron dpr3 - chr2L_6_2070001 chr2L_2070001 RAL-382 69 chr2L 2100377 2100401 chr2L 2109548 2109551 roo 9 9180 11.0 14.5 12.8 0.7 9174 chr2L 2100377 intron dpr3 - chr2L 2104964 intron dpr3 - chr2L 2109551 intron dpr3 - chr2L_9_2100001 chr2L_2100001 RAL-382 70 chr2L 2112064 2112136 chr2L 2119775 2119783 opus 20 7700 5.0 7.0 6.0 2.9 7719 chr2L 2112064 intergenic not near genes chr2L 2115924 intergenic not near genes chr2L 2119783 intergenic not near genes chr2L_20_2115001 chr2L_2115001 RAL-382 71 chr2L 2250384 2250445 chr2L 2251186 2251216 14 810 8.5 0.5 4.5 2.5 832 chr2L 2250384 intergenic Ser12 - chr2L 2250800 exon Ser12 - chr2L 2251216 exon Ser12 - chr2L_14_2250001 chr2L_2250001 RAL-382 72 chr2L 2256426 2256478 chr2L 2256556 2256608 10 129 2.0 7.0 4.5 1.8 182 chr2L 2256426 intergenic not near genes chr2L 2256517 intergenic not near genes chr2L 2256608 intergenic not near genes chr2L_10_2255001 chr2L_2255001 RAL-382 73 chr2L 2260773 2260799 chr2L 2260903 2260935 12 135 17.0 9.5 13.2 0.8 162 chr2L 2260773 intergenic not near genes chr2L 2260854 intergenic not near genes chr2L 2260935 intergenic not near genes chr2L_12_2260001 chr2L_2260001 RAL-382 74 chr2L 2260807 2260821 chr2L 2260898 2260957 7 124 11.0 8.5 9.8 0.6 150 chr2L 2260807 intergenic not near genes chr2L 2260882 intergenic not near genes chr2L 2260957 intergenic not near genes chr2L_7_2260001 chr2L_2260001 RAL-382 75 chr2L 2262266 2262332 chr2L 2262393 2262459 11 123 7.5 1.0 4.2 2.1 193 chr2L 2262266 intergenic not near genes chr2L 2262362 intergenic not near genes chr2L 2262459 intergenic not near genes chr2L_11_2260001 chr2L_2260001 RAL-382 76 chr2L 2267811 2267883 chr2L 2267947 2268019 21 132 9.5 8.0 8.8 2.1 208 chr2L 2267811 intergenic CG17242 - chr2L 2267915 intergenic CG17242 - chr2L 2268019 intergenic CG17242 - chr2L_21_2265001 chr2L_2265001 RAL-382 77 chr2L 2294020 2294073 chr2L 2299250 2299302 copia 12 5232 3.5 8.5 6.0 1.7 5282 chr2L 2294020 intergenic not near genes chr2L 2296661 intergenic not near genes chr2L 2299302 intergenic not near genes chr2L_12_2295001 chr2L_2295001 RAL-382 78 chr2L 2317071 2317132 chr2L 2317292 2317353 16 220 45.5 38.0 41.8 0.4 282 chr2L 2317071 intron,intron CG9967 -,eys + chr2L 2317212 intron,intron CG9967 -,eys + chr2L 2317353 intron,intron CG9967 -,eys + chr2L_16_2315001 chr2L_2315001 RAL-382 79 chr2L 2318828 2318907 chr2L 2318955 2319002 25 119 5.5 7.5 6.5 3.3 174 chr2L 2318828 intron,intron CG9967 -,eys + chr2L 2318915 intron,intron CG9967 -,eys + chr2L 2319002 intron,intron CG9967 -,eys + chr2L_25_2315001 chr2L_2315001 RAL-382 80 chr2L 2319384 2319461 chr2L 2319928 2319974 26 536 7.5 0.0 3.8 5.4 590 chr2L 2319384 intron,intron CG9967 -,eys + chr2L 2319679 intron,intron CG9967 -,eys + chr2L 2319974 intron,intron CG9967 -,eys + chr2L_26_2315001 chr2L_2315001 RAL-382 81 chr2L 2428742 2428806 chr2L 2428891 2428955 23 147 10.0 6.0 8.0 2.6 213 chr2L 2428742 5` UTR dpp + chr2L 2428848 5` UTR dpp + chr2L 2428955 5` UTR dpp + chr2L_23_2425001 chr2L_2425001 RAL-382 82 chr2L 2497596 2497617 chr2L 2497722 2497743 10 126 5.0 8.0 6.5 1.3 147 chr2L 2497596 3` UTR oaf + chr2L 2497670 3` UTR oaf + chr2L 2497743 3` UTR oaf + chr2L_10_2495001 chr2L_2495001 RAL-382 83 chr2L 2503665 2503742 chr2L 2504494 2504560 36 825 6.5 7.5 7.0 4.5 895 chr2L 2503665 intergenic not near genes chr2L 2504112 intergenic not near genes chr2L 2504560 intergenic not near genes chr2L_36_2500001 chr2L_2500001 RAL-382 84 chr2L 2557199 2557212 chr2L 2557323 2557338 10 126 11.0 26.0 18.5 0.5 139 chr2L 2557199 intergenic not near genes chr2L 2557268 intergenic not near genes chr2L 2557338 intergenic not near genes chr2L_10_2555001 chr2L_2555001 RAL-382 85 chr2L 2563339 2563376 chr2L 2563466 2563504 12 128 9.5 14.5 12.0 0.9 165 chr2L 2563339 exon Cyp309a1 - chr2L 2563422 intron Cyp309a1 - chr2L 2563504 exon Cyp309a1 - chr2L_12_2560001 chr2L_2560001 RAL-382 86 chr2L 2565506 2565563 chr2L 2571629 2571686 297 16 6122 6.5 11.5 9.0 1.6 6180 chr2L 2565506 exon Cyp309a2 - chr2L 2568596 intron Cyp309a2 - chr2L 2571686 exon Cyp309a2 - chr2L_16_2565001 chr2L_2565001 RAL-382 87 chr2L 2595231 2595278 chr2L 2595372 2595419 14 141 4.5 8.5 6.5 1.9 188 chr2L 2595231 intergenic not near genes chr2L 2595325 intergenic not near genes chr2L 2595419 intergenic not near genes chr2L_14_2595001 chr2L_2595001 RAL-382 88 chr2L 2661163 2661226 chr2L 2663046 2663099 I-element 17 1864 3.5 7.5 5.5 2.6 1936 chr2L 2661163 intergenic not near genes chr2L 2662131 intergenic not near genes chr2L 2663099 intergenic not near genes chr2L_17_2660001 chr2L_2660001 RAL-382 89 chr2L 2698804 2698886 chr2L 2698952 2699023 15 138 0.5 4.0 2.2 4.7 219 chr2L 2698804 intron CG31690 + chr2L 2698914 intron CG31690 + chr2L 2699023 intron CG31690 + chr2L_15_2695001 chr2L_2695001 RAL-382 90 chr2L 2703396 2703440 chr2L 2703530 2703574 12 132 7.5 11.5 9.5 1.1 178 chr2L 2703396 intron CG31690 + chr2L 2703485 intron CG31690 + chr2L 2703574 intron CG31690 + chr2L_12_2700001 chr2L_2700001 RAL-382 91 chr2L 2715642 2715649 chr2L 2715768 2715775 6 126 18.5 11.5 15.0 0.4 133 chr2L 2715642 intron CG31690 + chr2L 2715708 intron CG31690 + chr2L 2715775 intron CG31690 + chr2L_6_2715001 chr2L_2715001 RAL-382 92 chr2L 2715650 2715697 chr2L 2715764 2715823 29 123 10.0 10.5 10.2 2.6 173 chr2L 2715650 intron CG31690 + chr2L 2715736 intron CG31690 + chr2L 2715823 intron CG31690 + chr2L_29_2715001 chr2L_2715001 RAL-382 93 chr2L 2725124 2725166 chr2L 2725254 2725296 21 130 7.5 21.0 14.2 1.4 172 chr2L 2725124 intergenic not near genes chr2L 2725210 intergenic CG31689 + chr2L 2725296 intergenic CG31689 + chr2L_21_2725001 chr2L_2725001 RAL-382 94 chr2L 2772578 2772620 chr2L 2779210 2779214 297 19 6627 2.5 15.5 9.0 1.9 6636 chr2L 2772578 3` UTR Syt1 - chr2L 2775896 intron Syt1 - chr2L 2779214 3` UTR Syt1 - chr2L_19_2775001 chr2L_2775001 RAL-382 95 chr2L 2782899 2782929 chr2L 2782991 2783040 12 118 12.5 0.0 6.2 1.7 141 chr2L 2782899 intron Syt1 - chr2L 2782970 intron Syt1 - chr2L 2783040 3` UTR Syt1 - chr2L_12_2780001 chr2L_2780001 RAL-382 96 chr2L 2800561 2800615 chr2L 2800694 2800753 14 134 9.0 0.0 4.5 2.5 192 chr2L 2800561 intergenic not near genes chr2L 2800657 intergenic not near genes chr2L 2800753 intergenic not near genes chr2L_14_2800001 chr2L_2800001 RAL-382 97 chr2L 2826488 2826573 chr2L 2826630 2826708 15 138 3.0 5.5 4.2 2.9 220 chr2L 2826488 intron Duox - chr2L 2826598 intron Duox - chr2L 2826708 intron Duox - chr2L_15_2825001 chr2L_2825001 RAL-382 98 chr2L 2830368 2830423 chr2L 2830548 2830603 18 180 9.5 7.0 8.2 2.0 235 chr2L 2830368 intergenic Duox - chr2L 2830486 intergenic Duox - chr2L 2830603 intergenic Duox - chr2L_18_2830001 chr2L_2830001 RAL-382 99 chr2L 2895645 2895715 chr2L 2895781 2895859 14 135 7.0 3.0 5.0 2.3 214 chr2L 2895645 intron lilli + chr2L 2895752 intron lilli + chr2L 2895859 intron lilli + chr2L_14_2895001 chr2L_2895001 RAL-382 100 chr2L 2933251 2933324 chr2L 2935478 2935551 pogo 27 2226 3.0 6.0 4.5 4.9 2300 chr2L 2933251 intron lilli + chr2L 2934401 intron lilli + chr2L 2935551 intron lilli + chr2L_27_2930001 chr2L_2930001 RAL-382 101 chr2L 2937376 2937424 chr2L 2937494 2937552 19 127 12.0 6.0 9.0 1.9 176 chr2L 2937376 intron lilli + chr2L 2937464 intron lilli + chr2L 2937552 intron lilli + chr2L_19_2935001 chr2L_2935001 RAL-382 102 chr2L 2964262 2964302 chr2L 2964387 2964430 23 127 16.0 13.5 14.8 1.5 168 chr2L 2964262 3` UTR Rbp9 + chr2L 2964346 3` UTR Rbp9 + chr2L 2964430 3` UTR Rbp9 + chr2L_23_2960001 chr2L_2960001 RAL-382 103 chr2L 2979530 2979591 chr2L 2979659 2979722 6 132 35.5 36.0 35.8 0.2 192 chr2L 2979530 intergenic Chd1 -,CG9643 - chr2L 2979626 3` UTR Chd1 - chr2L 2979722 3` UTR Chd1 - chr2L_6_2975001 chr2L_2975001 RAL-382 104 chr2L 3072988 3073055 chr2L 3078241 3078308 copia 28 5253 7.5 10.0 8.8 2.9 5320 chr2L 3072988 intron toc - chr2L 3075648 intron toc - chr2L 3078308 intron toc - chr2L_28_3075001 chr2L_3075001 RAL-382 105 chr2L 3156504 3156565 chr2L 3156650 3156712 21 143 0.0 10.0 5.0 3.5 208 chr2L 3156504 intron Mad - chr2L 3156608 intron Mad - chr2L 3156712 intron Mad - chr2L_21_3155001 chr2L_3155001 RAL-382 106 chr2L 3172026 3172093 chr2L 3172169 3172229 22 142 8.0 10.5 9.2 2.2 203 chr2L 3172026 intergenic not near genes chr2L 3172128 intergenic not near genes chr2L 3172229 intergenic not near genes chr2L_22_3170001 chr2L_3170001 RAL-382 107 chr2L 3192171 3192236 chr2L 3192324 3192397 29 159 10.0 9.5 9.8 2.7 226 chr2L 3192171 exon CG34393 - chr2L 3192284 intron CG34393 - chr2L 3192397 intron CG34393 - chr2L_29_3190001 chr2L_3190001 RAL-382 108 chr2L 3197222 3197259 chr2L 3197488 3197525 6 266 9.0 7.5 8.2 0.7 303 chr2L 3197222 intron CG34393 - chr2L 3197374 intron CG34393 - chr2L 3197525 intron CG34393 - chr2L_6_3195001 chr2L_3195001 RAL-382 109 chr2L 3202690 3202738 chr2L 3210169 3210217 mdg1 11 7479 8.5 0.0 4.2 2.1 7527 chr2L 3202690 intergenic not near genes chr2L 3206454 intergenic not near genes chr2L 3210217 intergenic CR45336 + chr2L_11_3205001 chr2L_3205001 RAL-382 110 chr2L 3240896 3240966 chr2L 3241212 3241282 32 315 7.0 8.0 7.5 3.8 386 chr2L 3240896 intergenic not near genes chr2L 3241089 intergenic not near genes chr2L 3241282 intergenic not near genes chr2L_32_3240001 chr2L_3240001 RAL-382 111 chr2L 3251466 3251518 chr2L 3259078 3259133 springer 23 7613 9.0 14.5 11.8 1.8 7667 chr2L 3251466 intergenic not near genes chr2L 3255300 intergenic not near genes chr2L 3259133 intergenic not near genes chr2L_23_3255001 chr2L_3255001 RAL-382 112 chr2L 3261643 3261662 chr2L 3261721 3261785 7 120 7.5 4.0 5.8 1.0 142 chr2L 3261643 3` UTR CR45338 - chr2L 3261714 3` UTR CR45338 - chr2L 3261785 3` UTR CR45338 - chr2L_7_3260001 chr2L_3260001 RAL-382 113 chr2L 3272952 3272968 chr2L 3273117 3273133 5 165 5.5 8.5 7.0 0.6 181 chr2L 3272952 intergenic not near genes chr2L 3273042 intergenic not near genes chr2L 3273133 intergenic not near genes chr2L_5_3270001 chr2L_3270001 RAL-382 114 chr2L 3279912 3279957 chr2L 3280040 3280088 18 131 3.5 6.0 4.8 3.1 176 chr2L 3279912 intron CG3332 - chr2L 3280000 intron CG3332 - chr2L 3280088 intron CG3332 - chr2L_18_3275001 chr2L_3275001 RAL-382 115 chr2L 3286705 3286769 chr2L 3286826 3286897 27 124 11.0 8.5 9.8 2.5 192 chr2L 3286705 intergenic not near genes chr2L 3286801 intergenic not near genes chr2L 3286897 intergenic not near genes chr2L_27_3285001 chr2L_3285001 RAL-382 116 chr2L 3291195 3291265 chr2L 3291325 3291368 25 128 5.0 5.5 5.2 4.0 173 chr2L 3291195 intergenic CG9664 - chr2L 3291282 3` UTR CG9664 - chr2L 3291368 3` UTR CG9664 - chr2L_25_3290001 chr2L_3290001 RAL-382 117 chr2L 3358680 3358753 chr2L 3358819 3358886 40 136 7.5 7.0 7.2 4.9 206 chr2L 3358680 3` UTR CG34394 - chr2L 3358783 3` UTR CG34394 - chr2L 3358886 3` UTR CG34394 - chr2L_40_3355001 chr2L_3355001 RAL-382 118 chr2L 3388558 3388625 chr2L 3388849 3388916 pogo 20 290 8.0 10.0 9.0 2.0 358 chr2L 3388558 intergenic CG42460 - chr2L 3388737 intergenic CG42460 - chr2L 3388916 intergenic CG42460 -,CR44791 + chr2L_20_3385001 chr2L_3385001 RAL-382 119 chr2L 3497804 3497867 chr2L 3497916 3497995 29 124 7.5 11.0 9.2 2.8 191 chr2L 3497804 intron tim - chr2L 3497900 intron tim - chr2L 3497995 intron tim - chr2L_29_3495001 chr2L_3495001 RAL-382 120 chr2L 3508304 3508367 chr2L 3508432 3508469 30 127 9.0 12.0 10.5 2.6 165 chr2L 3508304 intergenic tim -,CR45299 + chr2L 3508386 intergenic CR45299 +,tim - chr2L 3508469 intergenic CR45299 +,tim - chr2L_30_3505001 chr2L_3505001 RAL-382 121 chr2L 3556883 3556965 chr2L 3557023 3557103 13 132 0.0 4.0 2.0 4.3 220 chr2L 3556883 intergenic not near genes chr2L 3556993 intergenic not near genes chr2L 3557103 intergenic not near genes chr2L_13_3555001 chr2L_3555001 RAL-382 122 chr2L 3582833 3582854 chr2L 3582960 3582981 16 127 3.5 4.0 3.8 3.3 148 chr2L 3582833 intergenic not near genes chr2L 3582907 intergenic not near genes chr2L 3582981 intergenic not near genes chr2L_16_3580001 chr2L_3580001 RAL-382 123 chr2L 3634070 3634129 chr2L 3634200 3634261 29 131 17.5 12.5 15.0 1.8 191 chr2L 3634070 intron for - chr2L 3634166 intron for - chr2L 3634261 exon for - chr2L_29_3630001 chr2L_3630001 RAL-382 124 chr2L 3649734 3649805 chr2L 3654991 3655057 copia 26 5253 2.5 7.5 5.0 4.3 5323 chr2L 3649734 intron for - chr2L 3652396 intron for - chr2L 3655057 intron for - chr2L_26_3650001 chr2L_3650001 RAL-382 125 chr2L 3673235 3673286 chr2L 3673385 3673436 7 148 3.5 5.5 4.5 1.3 201 chr2L 3673235 exon CG34340 + chr2L 3673336 intron CG34340 + chr2L 3673436 intron CG34340 + chr2L_7_3670001 chr2L_3670001 RAL-382 126 chr2L 3685979 3686055 chr2L 3686116 3686193 23 138 4.0 10.0 7.0 2.9 214 chr2L 3685979 intron CG34340 + chr2L 3686086 intron CG34340 + chr2L 3686193 intron CG34340 + chr2L_23_3685001 chr2L_3685001 RAL-382 127 chr2L 3712605 3712677 chr2L 3714479 3714551 21 1878 62.5 61.0 61.8 0.3 1946 chr2L 3712605 exon CG31955 - chr2L 3713578 5` UTR CG2818 + chr2L 3714551 intron CG2818 + chr2L_21_3710001 chr2L_3710001 RAL-382 128 chr2L 3783204 3783278 chr2L 3783345 3783419 36 140 5.5 13.0 9.2 3.5 215 chr2L 3783204 exon bowl + chr2L 3783312 3` UTR bowl + chr2L 3783419 3` UTR bowl + chr2L_36_3780001 chr2L_3780001 RAL-382 129 chr2L 3784754 3784828 chr2L 3785664 3785738 16 909 10.0 1.0 5.5 2.5 984 chr2L 3784754 intergenic CG31960 + chr2L 3785246 exon CG31960 + chr2L 3785738 5` UTR CG31958 + chr2L_16_3785001 chr2L_3785001 RAL-382 130 chr2L 3785441 3785503 chr2L 3785567 3785629 11 126 4.0 0.5 2.2 3.4 188 chr2L 3785441 exon CG31960 + chr2L 3785535 3` UTR CG31960 + chr2L 3785629 intergenic CG31960 +,CG31958 + chr2L_11_3785001 chr2L_3785001 RAL-382 131 chr2L 3784699 3784711 chr2L 3785585 3785630 17 892 33.5 0.5 17.0 0.9 931 chr2L 3784699 intergenic CG31960 + chr2L 3785164 exon CG31960 + chr2L 3785630 intergenic CG31960 +,CG31958 + chr2L_17_3785001 chr2L_3785001 RAL-382 132 chr2L 3792433 3792488 chr2L 3792580 3792610 7 143 2.5 7.0 4.8 1.2 177 chr2L 3792433 intron CG3921 + chr2L 3792522 intron CG3921 + chr2L 3792610 exon CG3921 + chr2L_7_3790001 chr2L_3790001 RAL-382 133 chr2L 3819575 3819627 chr2L 3819701 3819753 22 126 6.0 12.0 9.0 2.2 178 chr2L 3819575 intergenic not near genes chr2L 3819664 intergenic not near genes chr2L 3819753 intergenic not near genes chr2L_22_3815001 chr2L_3815001 RAL-382 134 chr2L 3891849 3891868 chr2L 3891984 3892003 9 133 18.0 7.0 12.5 0.7 154 chr2L 3891849 intron capu - chr2L 3891926 intron capu - chr2L 3892003 intron capu - chr2L_9_3890001 chr2L_3890001 RAL-382 135 chr2L 3891869 3891909 chr2L 3891979 3892044 17 131 13.0 6.0 9.5 1.6 175 chr2L 3891869 intron capu - chr2L 3891956 intron capu - chr2L 3892044 intron capu - chr2L_17_3890001 chr2L_3890001 RAL-382 136 chr2L 3897179 3897251 chr2L 3897314 3897387 20 136 8.0 1.0 4.5 3.6 208 chr2L 3897179 intron capu - chr2L 3897283 intron capu - chr2L 3897387 intron capu - chr2L_20_3895001 chr2L_3895001 RAL-382 137 chr2L 3898223 3898305 chr2L 3898358 3898433 16 134 2.5 8.0 5.2 2.6 210 chr2L 3898223 intron capu - chr2L 3898328 intron capu - chr2L 3898433 intron capu - chr2L_16_3895001 chr2L_3895001 RAL-382 138 chr2L 3909837 3909853 chr2L 3909969 3909985 7 132 19.0 7.5 13.2 0.5 148 chr2L 3909837 intron fred - chr2L 3909911 intron fred - chr2L 3909985 intron fred - chr2L_7_3905001 chr2L_3905001 RAL-382 139 chr2L 3909859 3909904 chr2L 3909959 3910036 8 117 5.5 6.5 6.0 1.1 177 chr2L 3909859 intron fred - chr2L 3909948 intron fred - chr2L 3910036 intron fred - chr2L_8_3905001 chr2L_3905001 RAL-382 140 chr2L 3915289 3915319 chr2L 3915474 3915505 14 186 4.5 9.5 7.0 1.8 216 chr2L 3915289 intron fred - chr2L 3915397 intron fred - chr2L 3915505 intron fred - chr2L_14_3915001 chr2L_3915001 RAL-382 141 chr2L 3933416 3933484 chr2L 3933612 3933680 24 194 11.0 6.5 8.8 2.4 264 chr2L 3933416 intron fred - chr2L 3933548 intron fred - chr2L 3933680 intron fred - chr2L_24_3930001 chr2L_3930001 RAL-382 142 chr2L 3936621 3936654 chr2L 3936742 3936784 14 128 4.5 15.0 9.8 1.3 163 chr2L 3936621 intron fred - chr2L 3936702 intron fred - chr2L 3936784 intron fred - chr2L_14_3935001 chr2L_3935001 RAL-382 143 chr2L 3943746 3943816 chr2L 3943887 3943957 12 141 6.0 7.0 6.5 1.6 211 chr2L 3943746 intron fred - chr2L 3943852 intron fred - chr2L 3943957 intron fred - chr2L_12_3940001 chr2L_3940001 RAL-382 144 chr2L 3952449 3952515 chr2L 3952578 3952644 26 128 9.5 7.0 8.2 2.8 195 chr2L 3952449 intron fred - chr2L 3952546 intron fred - chr2L 3952644 intron fred - chr2L_26_3950001 chr2L_3950001 RAL-382 145 chr2L 3970350 3970422 chr2L 3970498 3970550 24 146 5.5 12.0 8.8 2.4 200 chr2L 3970350 intron fred - chr2L 3970450 intron fred - chr2L 3970550 intron fred - chr2L_24_3970001 chr2L_3970001 RAL-382 146 chr2L 4008266 4008343 chr2L 4009175 4009252 29 907 7.0 7.5 7.2 3.5 986 chr2L 4008266 intergenic CG43773 +,CG43774 + chr2L 4008759 exon CG43774 + chr2L 4009252 intergenic CG43774 + chr2L_29_4005001 chr2L_4005001 RAL-382 147 chr2L 4037750 4037809 chr2L 4037887 4037945 19 136 9.5 6.5 8.0 2.1 195 chr2L 4037750 intron ed + chr2L 4037848 intron ed + chr2L 4037945 intron ed + chr2L_19_4035001 chr2L_4035001 RAL-382 148 chr2L 4065999 4066052 chr2L 4068874 4068926 Juan 23 2873 11.0 15.0 13.0 1.6 2927 chr2L 4065999 intron ed + chr2L 4067462 intron ed + chr2L 4068926 intron ed + chr2L_23_4065001 chr2L_4065001 RAL-382 149 chr2L 4074136 4074210 chr2L 4074279 4074353 31 142 8.5 8.5 8.5 3.3 217 chr2L 4074136 intron ed + chr2L 4074244 intron ed + chr2L 4074353 intron,3` UTR ed +,CR44984 - chr2L_31_4070001 chr2L_4070001 RAL-382 150 chr2L 4147925 4147961 chr2L 4148046 4148087 14 124 5.5 5.5 5.5 2.2 162 chr2L 4147925 intergenic not near genes chr2L 4148006 intergenic not near genes chr2L 4148087 intergenic not near genes chr2L_14_4145001 chr2L_4145001 RAL-382 151 chr2L 4150613 4150651 chr2L 4150743 4150781 16 128 4.5 14.0 9.2 1.6 168 chr2L 4150613 exon CG2955 + chr2L 4150697 exon CG2955 + chr2L 4150781 exon CG2955 + chr2L_16_4150001 chr2L_4150001 RAL-382 152 chr2L 4156488 4156542 chr2L 4156733 4156787 20 245 6.0 9.5 7.8 2.3 299 chr2L 4156488 intergenic not near genes chr2L 4156638 intergenic not near genes chr2L 4156787 intergenic not near genes chr2L_20_4155001 chr2L_4155001 RAL-382 153 chr2L 4166329 4166408 chr2L 4166462 4166541 24 132 4.0 7.0 5.5 3.7 212 chr2L 4166329 intergenic Or24a - chr2L 4166435 intergenic Or24a - chr2L 4166541 intergenic Or24a - chr2L_24_4165001 chr2L_4165001 RAL-382 154 chr2L 4180102 4180121 chr2L 4180209 4180240 8 121 8.5 9.5 9.0 0.8 138 chr2L 4180102 intergenic not near genes chr2L 4180171 intergenic not near genes chr2L 4180240 intergenic not near genes chr2L_8_4180001 chr2L_4180001 RAL-382 155 chr2L 4184433 4184504 chr2L 4184791 4184873 20 366 3.5 10.0 6.8 2.6 440 chr2L 4184433 intergenic not near genes chr2L 4184653 intergenic not near genes chr2L 4184873 intergenic not near genes chr2L_20_4180001 chr2L_4180001 RAL-382 156 chr2L 4218246 4218291 chr2L 4218381 4218426 7 135 9.0 0.0 4.5 1.3 180 chr2L 4218246 intron ft - chr2L 4218336 intron ft - chr2L 4218426 intron ft - chr2L_7_4215001 chr2L_4215001 RAL-382 157 chr2L 4291834 4291867 chr2L 4291950 4292001 17 130 0.0 7.5 3.8 3.5 167 chr2L 4291834 intron tutl + chr2L 4291918 intron tutl + chr2L 4292001 intron tutl + chr2L_17_4290001 chr2L_4290001 RAL-382 158 chr2L 4328022 4328044 chr2L 4328149 4328171 7 125 6.5 8.5 7.5 0.8 149 chr2L 4328022 intron CG16857 + chr2L 4328096 intron CG16857 + chr2L 4328171 intron CG16857 + chr2L_7_4325001 chr2L_4325001 RAL-382 159 chr2L 4342216 4342279 chr2L 4342363 4342426 18 147 6.0 7.0 6.5 2.4 210 chr2L 4342216 intron Atet + chr2L 4342321 intron Atet + chr2L 4342426 exon Atet + chr2L_18_4340001 chr2L_4340001 RAL-382 160 chr2L 4356588 4356644 chr2L 4356717 4356758 21 128 0.0 10.5 5.2 3.4 170 chr2L 4356588 intergenic not near genes chr2L 4356673 intergenic not near genes chr2L 4356758 intergenic not near genes chr2L_21_4355001 chr2L_4355001 RAL-382 161 chr2L 4422642 4422647 chr2L 4423547 4423552 4 905 28.5 6.0 17.2 0.2 910 chr2L 4422642 intron CG15431 - chr2L 4423097 intron CG15431 - chr2L 4423552 intron CG15431 - chr2L_4_4420001 chr2L_4420001 RAL-382 162 chr2L 4422028 4422041 chr2L 4422684 4422687 4 644 42.0 26.0 34.0 0.1 659 chr2L 4422028 intron CG15431 - chr2L 4422358 intron CG15431 - chr2L 4422687 intron CG15431 - chr2L_4_4420001 chr2L_4420001 RAL-382 163 chr2L 4422689 4422691 chr2L 4423594 4423595 4 905 20.5 14.5 17.5 0.2 906 chr2L 4422689 intron CG15431 - chr2L 4423142 intron CG15431 - chr2L 4423595 intron CG15431 - chr2L_4_4420001 chr2L_4420001 RAL-382 164 chr2L 4601657 4601725 chr2L 4609148 4609216 mdg1 21 7490 8.0 5.5 6.8 2.7 7559 chr2L 4601657 intron dp - chr2L 4605436 intron dp - chr2L 4609216 intron dp - chr2L_21_4605001 chr2L_4605001 RAL-382 165 chr2L 4627437 4627505 chr2L 4627563 4627636 27 131 9.0 7.0 8.0 3.0 199 chr2L 4627437 intergenic not near genes chr2L 4627536 intergenic not near genes chr2L 4627636 intergenic not near genes chr2L_27_4625001 chr2L_4625001 RAL-382 166 chr2L 4769078 4769150 chr2L 4769603 4769675 31 523 9.0 5.5 7.2 3.8 597 chr2L 4769078 intron CG15630 - chr2L 4769376 intron CG15630 - chr2L 4769675 intron CG15630 - chr2L_31_4765001 chr2L_4765001 RAL-382 167 chr2L 4789886 4789951 chr2L 4790010 4790085 29 128 8.0 10.0 9.0 2.9 199 chr2L 4789886 intron CG15630 - chr2L 4789986 intron CG15630 - chr2L 4790085 intron CG15630 - chr2L_29_4785001 chr2L_4785001 RAL-382 168 chr2L 4793285 4793322 chr2L 4793630 4793667 15 344 8.0 10.5 9.2 1.5 382 chr2L 4793285 intron CG15630 - chr2L 4793476 intron CG15630 - chr2L 4793667 exon CG15630 - chr2L_15_4790001 chr2L_4790001 RAL-382 169 chr2L 4869424 4869427 chr2L 4869554 4869557 5 130 27.0 6.5 16.8 0.3 133 chr2L 4869424 intron pog + chr2L 4869490 intron pog + chr2L 4869557 intron pog + chr2L_5_4865001 chr2L_4865001 RAL-382 170 chr2L 4869429 4869496 chr2L 4869547 4869626 24 128 8.5 8.0 8.2 2.6 197 chr2L 4869429 intron pog + chr2L 4869528 intron pog + chr2L 4869626 intron pog + chr2L_24_4865001 chr2L_4865001 RAL-382 171 chr2L 4901094 4901140 chr2L 4901246 4901292 25 151 16.0 7.0 11.5 2.0 198 chr2L 4901094 intron CG3036 + chr2L 4901193 intron CG3036 + chr2L 4901292 intron CG3036 + chr2L_25_4900001 chr2L_4900001 RAL-382 172 chr2L 4914674 4914704 chr2L 4914799 4914833 12 128 17.5 11.0 14.2 0.8 159 chr2L 4914674 intron hoe1 - chr2L 4914754 intron hoe1 - chr2L 4914833 intron hoe1 - chr2L_12_4910001 chr2L_4910001 RAL-382 173 chr2L 4914705 4914733 chr2L 4914792 4914862 19 125 11.5 9.0 10.2 1.7 157 chr2L 4914705 intron hoe1 - chr2L 4914784 intron hoe1 - chr2L 4914862 intron hoe1 - chr2L_19_4910001 chr2L_4910001 RAL-382 174 chr2L 4918128 4918188 chr2L 4923251 4923311 jockey 34 5123 11.5 13.0 12.2 2.6 5183 chr2L 4918128 intron hoe1 - chr2L 4920720 intron hoe1 - chr2L 4923311 intron hoe1 - chr2L_34_4920001 chr2L_4920001 RAL-382 175 chr2L 4925627 4925696 chr2L 4925756 4925825 16 129 8.0 7.0 7.5 1.9 198 chr2L 4925627 intron hoe1 - chr2L 4925726 intron hoe1 - chr2L 4925825 intron hoe1 - chr2L_16_4925001 chr2L_4925001 RAL-382 176 chr2L 4953479 4953492 chr2L 4953770 4953777 pogo 4 290 12.5 0.0 6.2 0.6 298 chr2L 4953479 intergenic Jon25Bii - chr2L 4953628 intergenic Jon25Bii - chr2L 4953777 intergenic not near genes chr2L_4_4950001 chr2L_4950001 RAL-382 177 chr2L 5084999 5085035 chr2L 5085141 5085177 18 142 7.5 9.0 8.2 2.0 178 chr2L 5084999 intron pgant5 - chr2L 5085088 intron pgant5 - chr2L 5085177 intron pgant5 - chr2L_18_5085001 chr2L_5085001 RAL-382 178 chr2L 5117248 5117325 chr2L 5117380 5117457 43 132 9.5 9.5 9.5 4.1 209 chr2L 5117248 intron Msp300 + chr2L 5117352 intron Msp300 + chr2L 5117457 intron Msp300 + chr2L_43_5115001 chr2L_5115001 RAL-382 179 chr2L 5120925 5120995 chr2L 5121069 5121137 16 143 9.5 4.5 7.0 2.0 212 chr2L 5120925 intron Msp300 + chr2L 5121031 intron Msp300 + chr2L 5121137 intron Msp300 + chr2L_16_5120001 chr2L_5120001 RAL-382 180 chr2L 5147678 5147754 chr2L 5147960 5148036 36 278 9.5 9.5 9.5 3.4 358 chr2L 5147678 intron Msp300 + chr2L 5147857 intron Msp300 + chr2L 5148036 intron Msp300 + chr2L_36_5145001 chr2L_5145001 RAL-382 181 chr2L 5204692 5204694 chr2L 5204826 5204828 4 134 8.0 22.0 15.0 0.2 136 chr2L 5204692 intron Msp300 + chr2L 5204760 intron Msp300 + chr2L 5204828 intron Msp300 + chr2L_4_5200001 chr2L_5200001 RAL-382 182 chr2L 5263675 5263741 chr2L 5263807 5263873 27 132 8.0 10.5 9.2 2.6 198 chr2L 5263675 intron tkv - chr2L 5263774 intron tkv - chr2L 5263873 intron tkv - chr2L_27_5260001 chr2L_5260001 RAL-382 183 chr2L 5342725 5342791 chr2L 5345155 5345221 Doc 35 2429 10.0 1.0 5.5 5.4 2496 chr2L 5342725 intergenic CG12512 - chr2L 5343973 intergenic not near genes chr2L 5345221 intergenic not near genes chr2L_35_5340001 chr2L_5340001 RAL-382 184 chr2L 5416605 5416613 chr2L 5416736 5416744 5 131 19.5 10.5 15.0 0.3 139 chr2L 5416605 intergenic H15 + chr2L 5416674 intergenic H15 + chr2L 5416744 intergenic H15 + chr2L_5_5415001 chr2L_5415001 RAL-382 185 chr2L 5416618 5416653 chr2L 5416734 5416784 21 126 13.0 10.5 11.8 1.6 166 chr2L 5416618 intergenic H15 + chr2L 5416701 intergenic H15 + chr2L 5416784 intergenic H15 + chr2L_21_5415001 chr2L_5415001 RAL-382 186 chr2L 5416659 5416673 chr2L 5416732 5416784 8 107 11.0 10.0 10.5 0.7 125 chr2L 5416659 intergenic H15 + chr2L 5416722 intergenic H15 + chr2L 5416784 intergenic H15 + chr2L_8_5415001 chr2L_5415001 RAL-382 187 chr2L 5449654 5449679 chr2L 5449804 5449813 8 148 17.5 0.0 8.8 0.8 159 chr2L 5449654 intergenic not near genes chr2L 5449734 intergenic not near genes chr2L 5449813 intergenic not near genes chr2L_8_5445001 chr2L_5445001 RAL-382 188 chr2L 5475107 5475162 chr2L 5475262 5475317 25 155 4.0 7.0 5.5 3.8 210 chr2L 5475107 intergenic not near genes chr2L 5475212 intergenic not near genes chr2L 5475317 intergenic not near genes chr2L_25_5475001 chr2L_5475001 RAL-382 189 chr2L 5487967 5488035 chr2L 5488097 5488165 22 129 9.0 1.0 5.0 3.7 198 chr2L 5487967 intergenic not near genes chr2L 5488066 intergenic not near genes chr2L 5488165 intergenic not near genes chr2L_22_5485001 chr2L_5485001 RAL-382 190 chr2L 5492491 5492540 chr2L 5492637 5492711 14 154 0.0 9.0 4.5 2.5 220 chr2L 5492491 intergenic not near genes chr2L 5492601 intergenic not near genes chr2L 5492711 intergenic not near genes chr2L_14_5490001 chr2L_5490001 RAL-382 191 chr2L 5500012 5500073 chr2L 5500148 5500209 23 135 0.0 6.5 3.2 5.5 197 chr2L 5500012 intergenic not near genes chr2L 5500110 intergenic not near genes chr2L 5500209 intergenic not near genes chr2L_23_5500001 chr2L_5500001 RAL-382 192 chr2L 5508481 5508558 chr2L 5508608 5508684 24 126 9.5 9.5 9.5 2.3 203 chr2L 5508481 intergenic not near genes chr2L 5508582 intergenic not near genes chr2L 5508684 intergenic not near genes chr2L_24_5505001 chr2L_5505001 RAL-382 193 chr2L 5516611 5516676 chr2L 5516740 5516805 32 128 14.0 8.0 11.0 2.7 194 chr2L 5516611 intergenic not near genes chr2L 5516708 intergenic not near genes chr2L 5516805 intergenic not near genes chr2L_32_5515001 chr2L_5515001 RAL-382 194 chr2L 5546553 5546623 chr2L 5546689 5546759 36 135 10.0 8.5 9.2 3.5 206 chr2L 5546553 3` UTR Lam + chr2L 5546656 intergenic Lam +,Oscillin + chr2L 5546759 intergenic Lam +,Oscillin + chr2L_36_5545001 chr2L_5545001 RAL-382 195 chr2L 5611758 5611827 chr2L 5612168 5612222 29 409 5.5 6.0 5.8 4.3 464 chr2L 5611758 intron CG14010 - chr2L 5611990 intron CG14010 - chr2L 5612222 intron CG14010 - chr2L_29_5610001 chr2L_5610001 RAL-382 196 chr2L 5632559 5632607 chr2L 5632786 5632833 6 228 32.5 30.5 31.5 0.2 274 chr2L 5632559 intron,3` UTR CG31646 -,CR44822 - chr2L 5632696 intron CG31646 - chr2L 5632833 intron CG31646 - chr2L_6_5630001 chr2L_5630001 RAL-382 197 chr2L 5646646 5646655 chr2L 5646785 5646794 4 139 15.0 12.5 13.8 0.3 148 chr2L 5646646 intron CG31646 - chr2L 5646720 intron CG31646 - chr2L 5646794 intron CG31646 - chr2L_4_5645001 chr2L_5645001 RAL-382 198 chr2L 5686411 5686444 chr2L 5686543 5686576 15 132 10.0 18.5 14.2 1.0 165 chr2L 5686411 intergenic not near genes chr2L 5686494 intergenic not near genes chr2L 5686576 intergenic not near genes chr2L_15_5685001 chr2L_5685001 RAL-382 199 chr2L 5695814 5695889 chr2L 5695956 5696031 36 139 9.0 5.5 7.2 4.4 217 chr2L 5695814 intergenic not near genes chr2L 5695922 intergenic not near genes chr2L 5696031 intergenic not near genes chr2L_36_5695001 chr2L_5695001 RAL-382 200 chr2L 5764846 5764929 chr2L 5765005 5765081 8 158 0.0 7.5 3.8 1.7 235 chr2L 5764846 intron obst-E - chr2L 5764964 intron obst-E - chr2L 5765081 intron obst-E - chr2L_8_5760001 chr2L_5760001 RAL-382 201 chr2L 5806201 5806240 chr2L 5806354 5806393 16 153 0.0 10.0 5.0 2.7 192 chr2L 5806201 intron CG11034 + chr2L 5806297 intron CG11034 + chr2L 5806393 intron CG11034 + chr2L_16_5805001 chr2L_5805001 RAL-382 202 chr2L 5814641 5814714 chr2L 5814774 5814847 25 133 4.0 6.0 5.0 4.2 206 chr2L 5814641 intergenic not near genes chr2L 5814744 intergenic not near genes chr2L 5814847 intergenic not near genes chr2L_25_5810001 chr2L_5810001 RAL-382 203 chr2L 5827671 5827729 chr2L 5836729 5836787 roo 25 9057 8.5 10.5 9.5 2.4 9116 chr2L 5827671 intron TrissinR + chr2L 5832229 intron TrissinR + chr2L 5836787 intron TrissinR + chr2L_25_5830001 chr2L_5830001 RAL-382 204 chr2L 5846786 5846813 chr2L 5846913 5846940 13 125 17.5 9.5 13.5 0.9 154 chr2L 5846786 intron TrissinR + chr2L 5846863 intron TrissinR + chr2L 5846940 intron TrissinR + chr2L_13_5845001 chr2L_5845001 RAL-382 205 chr2L 5887556 5887631 chr2L 5887687 5887762 27 131 4.5 11.0 7.8 3.1 206 chr2L 5887556 3` UTR CR44577 - chr2L 5887659 3` UTR CR44577 - chr2L 5887762 3` UTR CR44577 - chr2L_27_5885001 chr2L_5885001 RAL-382 206 chr2L 5904410 5904451 chr2L 5904540 5904579 15 130 13.5 0.0 6.8 1.9 169 chr2L 5904410 exon CG9021 - chr2L 5904494 intron CG9021 - chr2L 5904579 intron CG9021 - chr2L_15_5900001 chr2L_5900001 RAL-382 207 chr2L 5922902 5922913 chr2L 5923031 5923042 6 128 11.5 15.0 13.2 0.4 140 chr2L 5922902 3` UTR CG9016 - chr2L 5922972 3` UTR CG9016 - chr2L 5923042 3` UTR CG9016 - chr2L_6_5920001 chr2L_5920001 RAL-382 208 chr2L 5946670 5946728 chr2L 5946803 5946861 22 127 3.0 7.5 5.2 3.5 191 chr2L 5946670 exon Gpdh + chr2L 5946766 intron Gpdh + chr2L 5946861 intron Gpdh + chr2L_22_5945001 chr2L_5945001 RAL-382 209 chr2L 5982113 5982166 chr2L 5982212 5982235 25 114 7.5 8.5 8.0 2.8 122 chr2L 5982113 intron eIF-4a + chr2L 5982174 intron eIF-4a + chr2L 5982235 intron eIF-4a + chr2L_25_5980001 chr2L_5980001 RAL-382 210 chr2L 5988987 5989046 chr2L 5989113 5989172 31 123 11.5 1.0 6.2 4.3 185 chr2L 5988987 intergenic ifc +,lid - chr2L 5989080 intergenic ifc +,lid - chr2L 5989172 intergenic lid -,ifc + chr2L_31_5985001 chr2L_5985001 RAL-382 211 chr2L 5993282 5993354 chr2L 5993423 5993491 19 137 6.5 5.0 5.8 2.8 209 chr2L 5993282 exon lid - chr2L 5993386 intron lid - chr2L 5993491 exon lid - chr2L_19_5990001 chr2L_5990001 RAL-382 212 chr2L 6002404 6002472 chr2L 6002540 6002558 36 133 10.0 14.0 12.0 2.8 154 chr2L 6002404 3` UTR Tsp26A + chr2L 6002481 3` UTR Tsp26A + chr2L 6002558 3` UTR Tsp26A + chr2L_36_6000001 chr2L_6000001 RAL-382 213 chr2L 6050393 6050467 chr2L 6050547 6050605 21 153 6.0 1.0 3.5 4.7 212 chr2L 6050393 3` UTR CG12393 + chr2L 6050499 intergenic CG12393 +,CG9135 + chr2L 6050605 intergenic CG12393 +,CG9135 + chr2L_21_6050001 chr2L_6050001 RAL-382 214 chr2L 6137721 6137785 chr2L 6137860 6137931 14 141 4.5 0.0 2.2 4.4 210 chr2L 6137721 intergenic not near genes chr2L 6137826 intergenic not near genes chr2L 6137931 intergenic not near genes chr2L_14_6135001 chr2L_6135001 RAL-382 215 chr2L 6157143 6157219 chr2L 6157524 6157598 30 378 7.5 8.0 7.8 3.4 455 chr2L 6157143 intergenic not near genes chr2L 6157370 intergenic not near genes chr2L 6157598 intergenic not near genes chr2L_30_6155001 chr2L_6155001 RAL-382 216 chr2L 6185404 6185465 chr2L 6185518 6185593 24 116 5.0 10.5 7.8 2.7 189 chr2L 6185404 intron CG34380 + chr2L 6185498 intron CG34380 + chr2L 6185593 intron CG34380 + chr2L_24_6185001 chr2L_6185001 RAL-382 217 chr2L 6271534 6271588 chr2L 6271736 6271806 7 220 0.0 7.5 3.8 1.5 272 chr2L 6271534 intron Ddr + chr2L 6271670 intron Ddr + chr2L 6271806 intron Ddr + chr2L_7_6270001 chr2L_6270001 RAL-382 218 chr2L 6279590 6279632 chr2L 6279719 6279761 INE-1 24 128 19.5 5.0 12.2 1.8 171 chr2L 6279590 intron Ddr + chr2L 6279676 intron Ddr + chr2L 6279761 intron Ddr + chr2L_24_6275001 chr2L_6275001 RAL-382 219 chr2L 6283895 6283976 chr2L 6284056 6284138 17 160 7.0 0.0 3.5 3.8 243 chr2L 6283895 intron Ddr + chr2L 6284016 intron Ddr + chr2L 6284138 intron Ddr + chr2L_17_6280001 chr2L_6280001 RAL-382 220 chr2L 6291814 6291850 chr2L 6291933 6291980 18 129 11.5 13.5 12.5 1.3 166 chr2L 6291814 intron Ddr + chr2L 6291897 intron Ddr + chr2L 6291980 intron Ddr + chr2L_18_6290001 chr2L_6290001 RAL-382 221 chr2L 6363113 6363119 chr2L 6366089 6366095 Burdock 5 2976 18.5 6.5 12.5 0.4 2982 chr2L 6363113 intergenic not near genes chr2L 6364604 intergenic not near genes chr2L 6366095 intergenic not near genes chr2L_5_6360001 chr2L_6360001 RAL-382 222 chr2L 6363120 6363183 chr2L 6366082 6366099 Burdock 19 2970 8.0 5.5 6.8 2.4 2979 chr2L 6363120 intergenic not near genes chr2L 6364610 intergenic not near genes chr2L 6366099 intergenic not near genes chr2L_19_6360001 chr2L_6360001 RAL-382 223 chr2L 6414945 6415017 chr2L 6415086 6415157 20 140 1.0 10.5 5.8 2.9 212 chr2L 6414945 3` UTR CG13982 + chr2L 6415051 3` UTR CG13982 + chr2L 6415157 3` UTR CG13982 + chr2L_20_6415001 chr2L_6415001 RAL-382 224 chr2L 6424079 6424108 chr2L 6424209 6424238 17 130 5.5 10.5 8.0 1.9 159 chr2L 6424079 intergenic Fic + chr2L 6424158 intergenic Fic + chr2L 6424238 intergenic Fic + chr2L_17_6420001 chr2L_6420001 RAL-382 225 chr2L 6426814 6426840 chr2L 6445124 6445150 roo 8 18309 0.0 10.5 5.2 1.3 18336 chr2L 6426814 3` UTR CG9527 - chr2L 6435982 intron CG9527 - chr2L 6445150 exon CG9527 - chr2L_8_6435001 chr2L_6435001 RAL-382 226 chr2L 6426844 6426878 chr2L 6445118 6445188 roo 18 18305 0.0 9.5 4.8 3.1 18344 chr2L 6426844 3` UTR CG9527 - chr2L 6436016 intron CG9527 - chr2L 6445188 exon CG9527 - chr2L_18_6435001 chr2L_6435001 RAL-382 227 chr2L 6448327 6448357 chr2L 6448467 6448492 6 136 0.0 0.0 0.0 6.0 165 chr2L 6448327 intergenic retm -,CG9527 - chr2L 6448410 intergenic retm -,CG9527 - chr2L 6448492 3` UTR retm - chr2L_6_6445001 chr2L_6445001 RAL-382 228 chr2L 6463512 6463584 chr2L 6463654 6463679 15 126 4.5 4.0 4.2 2.9 167 chr2L 6463512 exon CG16947 - chr2L 6463596 exon CG16947 - chr2L 6463679 exon CG16947 - chr2L_15_6460001 chr2L_6460001 RAL-382 229 chr2L 6537092 6537163 chr2L 6537220 6537291 20 128 7.0 5.0 6.0 2.9 199 chr2L 6537092 intron eya - chr2L 6537192 intron eya - chr2L 6537291 intron eya - chr2L_20_6535001 chr2L_6535001 RAL-382 230 chr2L 6544321 6544395 chr2L 6544463 6544537 28 141 5.5 7.5 6.5 3.7 216 chr2L 6544321 intron eya - chr2L 6544429 intron eya - chr2L 6544537 intron eya - chr2L_28_6540001 chr2L_6540001 RAL-382 231 chr2L 6590051 6590062 chr2L 6590179 6590190 4 128 23.0 1.0 12.0 0.3 139 chr2L 6590051 intron CG11319 - chr2L 6590120 intron CG11319 - chr2L 6590190 intron CG11319 - chr2L_4_6590001 chr2L_6590001 RAL-382 232 chr2L 6590063 6590083 chr2L 6590177 6590211 9 125 19.5 1.0 10.2 0.8 148 chr2L 6590063 intron CG11319 - chr2L 6590137 intron CG11319 - chr2L 6590211 intron CG11319 - chr2L_9_6590001 chr2L_6590001 RAL-382 233 chr2L 6590085 6590122 chr2L 6590173 6590250 16 115 7.0 1.5 4.2 3.1 165 chr2L 6590085 intron CG11319 - chr2L 6590168 intron CG11319 - chr2L 6590250 intron CG11319 - chr2L_16_6590001 chr2L_6590001 RAL-382 234 chr2L 6613414 6613426 chr2L 6613662 6613674 6 248 12.5 7.5 10.0 0.5 260 chr2L 6613414 intron CG11050 + chr2L 6613544 intron CG11050 + chr2L 6613674 intron CG11050 + chr2L_6_6610001 chr2L_6610001 RAL-382 235 chr2L 6655481 6655542 chr2L 6655893 6655934 16 405 2.0 5.0 3.5 3.6 453 chr2L 6655481 exon CG31633 - chr2L 6655708 exon CG31633 - chr2L 6655934 exon CG31633 - chr2L_16_6655001 chr2L_6655001 RAL-382 236 chr2L 6746047 6746118 chr2L 6746173 6746244 34 124 5.5 8.5 7.0 4.2 197 chr2L 6746047 intron CG11221 + chr2L 6746146 intron CG11221 + chr2L 6746244 intron CG11221 + chr2L_34_6745001 chr2L_6745001 RAL-382 237 chr2L 6771941 6772018 chr2L 6772078 6772084 13 115 4.5 4.5 4.5 2.4 143 chr2L 6771941 intron CG11321 - chr2L 6772012 intron CG11321 - chr2L 6772084 intron CG11321 - chr2L_13_6770001 chr2L_6770001 RAL-382 238 chr2L 6772583 6772590 chr2L 6772672 6772709 5 105 11.0 9.5 10.2 0.4 126 chr2L 6772583 5` UTR CG11321 - chr2L 6772646 5` UTR CG11321 - chr2L 6772709 5` UTR CG11321 - chr2L_5_6770001 chr2L_6770001 RAL-382 239 chr2L 6799495 6799556 chr2L 6799626 6799694 28 137 6.0 7.5 6.8 3.6 199 chr2L 6799495 5` UTR CR43610 + chr2L 6799594 5` UTR CR43610 + chr2L 6799694 intergenic CR43610 +,CG17376 - chr2L_28_6795001 chr2L_6795001 RAL-382 240 chr2L 6876751 6876767 chr2L 6882987 6883007 diver 4 6236 26.0 12.5 19.2 0.2 6256 chr2L 6876751 intron Nlg2 + chr2L 6879879 intron Nlg2 + chr2L 6883007 intron Nlg2 + chr2L_4_6875001 chr2L_6875001 RAL-382 241 chr2L 6876768 6876810 chr2L 6882970 6883014 diver 22 6226 13.5 10.0 11.8 1.7 6246 chr2L 6876768 intron Nlg2 + chr2L 6879891 intron Nlg2 + chr2L 6883014 intron Nlg2 + chr2L_22_6875001 chr2L_6875001 RAL-382 242 chr2L 6888821 6888840 chr2L 6888956 6888975 13 135 9.5 11.5 10.5 1.1 154 chr2L 6888821 intron Nlg2 + chr2L 6888898 intron Nlg2 + chr2L 6888975 intron Nlg2 + chr2L_13_6885001 chr2L_6885001 RAL-382 243 chr2L 6891395 6891465 chr2L 6891543 6891613 31 148 11.5 11.5 11.5 2.5 218 chr2L 6891395 intron Nlg2 + chr2L 6891504 intron Nlg2 + chr2L 6891613 intron Nlg2 + chr2L_31_6890001 chr2L_6890001 RAL-382 244 chr2L 6950113 6950188 chr2L 6950368 6950443 30 254 5.0 6.0 5.5 4.6 330 chr2L 6950113 exon Gas41 - chr2L 6950278 intergenic Gas41 -,SA + chr2L 6950443 5` UTR SA + chr2L_30_6950001 chr2L_6950001 RAL-382 245 chr2L 6991397 6991431 chr2L 6998552 6998583 HMS-Beagle 10 7165 15.5 4.0 9.8 0.9 7186 chr2L 6991397 intron uif - chr2L 6994990 intron uif - chr2L 6998583 intron uif - chr2L_10_6990001 chr2L_6990001 RAL-382 246 chr2L 7025062 7025063 chr2L 13827834 13827837 7 6802773 26.0 32.5 29.2 0.2 6802775 chr2L 7025062 3` UTR CG31908 - chr2L 10426450 intron SmB - chr2L 13827837 intergenic tam -,Arpc1 - chr2L_7_10425001 chr2L_10425001 RAL-382 247 chr2L 7082851 7082884 chr2L 7082987 7083021 14 137 18.5 19.0 18.8 0.7 170 chr2L 7082851 intron Pvf2 - chr2L 7082936 intron Pvf2 - chr2L 7083021 intron Pvf2 - chr2L_14_7080001 chr2L_7080001 RAL-382 248 chr2L 7095812 7095822 chr2L 7095942 7095952 6 130 13.5 5.0 9.2 0.6 140 chr2L 7095812 intergenic not near genes chr2L 7095882 intergenic not near genes chr2L 7095952 intergenic not near genes chr2L_6_7095001 chr2L_7095001 RAL-382 249 chr2L 7111707 7111768 chr2L 7111843 7111903 8 135 7.5 0.0 3.8 1.7 196 chr2L 7111707 intron Pvf3 - chr2L 7111805 intron Pvf3 - chr2L 7111903 intron Pvf3 - chr2L_8_7110001 chr2L_7110001 RAL-382 250 chr2L 7111770 7111786 chr2L 7111840 7111922 11 129 5.5 0.0 2.8 2.9 152 chr2L 7111770 intron Pvf3 - chr2L 7111846 intron Pvf3 - chr2L 7111922 intron Pvf3 - chr2L_11_7110001 chr2L_7110001 RAL-382 251 chr2L 7126820 7126850 chr2L 7126949 7126979 14 129 11.5 0.0 5.8 2.1 159 chr2L 7126820 intron Pvf3 - chr2L 7126900 intron Pvf3 - chr2L 7126979 intron Pvf3 - chr2L_14_7125001 chr2L_7125001 RAL-382 252 chr2L 7151787 7151849 chr2L 7152132 7152194 24 345 8.5 9.0 8.8 2.4 407 chr2L 7151787 intron Pvf3 - chr2L 7151990 intron Pvf3 - chr2L 7152194 intron Pvf3 - chr2L_24_7150001 chr2L_7150001 RAL-382 253 chr2L 7159687 7159699 chr2L 7159837 7159849 5 149 9.0 16.0 12.5 0.4 162 chr2L 7159687 intergenic not near genes chr2L 7159768 intergenic not near genes chr2L 7159849 intergenic not near genes chr2L_5_7155001 chr2L_7155001 RAL-382 254 chr2L 7169651 7169697 chr2L 7169807 7169853 13 157 0.0 0.0 0.0 13.0 202 chr2L 7169651 intergenic not near genes chr2L 7169752 intergenic not near genes chr2L 7169853 intergenic not near genes chr2L_13_7165001 chr2L_7165001 RAL-382 255 chr2L 7197948 7198022 chr2L 7198076 7198151 40 128 12.0 8.0 10.0 3.6 203 chr2L 7197948 intron CG4502 - chr2L 7198050 intron CG4502 - chr2L 7198151 intron CG4502 - chr2L_40_7195001 chr2L_7195001 RAL-382 256 chr2L 7295954 7296022 chr2L 7296136 7296212 16 187 6.0 4.5 5.2 2.6 258 chr2L 7295954 intergenic not near genes chr2L 7296083 intergenic not near genes chr2L 7296212 intergenic not near genes chr2L_16_7295001 chr2L_7295001 RAL-382 257 chr2L 7330222 7330294 chr2L 7330351 7330423 24 128 6.0 5.5 5.8 3.5 201 chr2L 7330222 intergenic not near genes chr2L 7330322 intergenic not near genes chr2L 7330423 intergenic not near genes chr2L_24_7330001 chr2L_7330001 RAL-382 258 chr2L 7335159 7335229 chr2L 7335306 7335376 33 146 11.5 7.0 9.2 3.2 217 chr2L 7335159 intron Wnt6 + chr2L 7335268 intron Wnt6 + chr2L 7335376 intron Wnt6 + chr2L_33_7335001 chr2L_7335001 RAL-382 259 chr2L 7343306 7343341 chr2L 7350468 7350484 roo 11 7159 7.5 9.0 8.2 1.2 7178 chr2L 7343306 intron Wnt6 + chr2L 7346895 intron Wnt6 + chr2L 7350484 intron Wnt6 + chr2L_11_7345001 chr2L_7345001 RAL-382 260 chr2L 7405732 7405793 chr2L 7405862 7405923 9 129 10.5 0.5 5.5 1.4 191 chr2L 7405732 exon CG5177 + chr2L 7405828 intron CG5177 + chr2L 7405923 intron CG5177 + chr2L_9_7405001 chr2L_7405001 RAL-382 261 chr2L 7406963 7406970 chr2L 7407120 7407127 7 157 0.0 0.0 0.0 7.0 164 chr2L 7406963 intron CG5177 + chr2L 7407045 intron CG5177 + chr2L 7407127 intron CG5177 + chr2L_7_7405001 chr2L_7405001 RAL-382 262 chr2L 5904538 5904540 chr2L 7466148 7466149 12 1561609 2.0 38.0 20.0 0.6 1561611 chr2L 5904538 intron CG9021 - chr2L 6685344 exon CG11327 - chr2L 7466149 intergenic CG6055 + chr2L_12_6685001 chr2L_6685001 RAL-382 263 chr2L 7555192 7555232 chr2L 7555319 7555359 16 127 0.5 12.0 6.2 2.2 167 chr2L 7555192 intron RapGAP1 - chr2L 7555276 intron RapGAP1 - chr2L 7555359 intron RapGAP1 - chr2L_16_7555001 chr2L_7555001 RAL-382 264 chr2L 7562134 7562191 chr2L 7562264 7562321 33 130 7.5 12.0 9.8 3.1 187 chr2L 7562134 intron RapGAP1 - chr2L 7562228 intron RapGAP1 - chr2L 7562321 intron RapGAP1 - chr2L_33_7560001 chr2L_7560001 RAL-382 265 chr2L 7567450 7567515 chr2L 7567562 7567605 35 123 10.0 11.5 10.8 3.0 155 chr2L 7567450 intron RapGAP1 - chr2L 7567528 intron RapGAP1 - chr2L 7567605 intron RapGAP1 - chr2L_35_7565001 chr2L_7565001 RAL-382 266 chr2L 7579157 7579233 chr2L 7579398 7579462 BS 36 235 9.5 0.0 4.8 6.2 305 chr2L 7579157 intergenic RapGAP1 - chr2L 7579310 intergenic RapGAP1 - chr2L 7579462 intergenic RapGAP1 - chr2L_36_7575001 chr2L_7575001 RAL-382 267 chr2L 7581434 7581496 chr2L 7581572 7581635 5 139 4.0 0.0 2.0 1.7 201 chr2L 7581434 intergenic Spn28B + chr2L 7581534 intergenic Spn28B + chr2L 7581635 intergenic Spn28B + chr2L_5_7580001 chr2L_7580001 RAL-382 268 chr2L 7585456 7585470 chr2L 7585605 7585619 13 149 11.0 4.5 7.8 1.5 163 chr2L 7585456 intergenic not near genes chr2L 7585538 intergenic not near genes chr2L 7585619 intergenic not near genes chr2L_13_7585001 chr2L_7585001 RAL-382 269 chr2L 7621769 7621817 chr2L 7621911 7621959 9 142 6.5 6.0 6.2 1.2 190 chr2L 7621769 intergenic not near genes chr2L 7621864 intergenic not near genes chr2L 7621959 intergenic not near genes chr2L_9_7620001 chr2L_7620001 RAL-382 270 chr2L 7629109 7629185 chr2L 7629246 7629322 25 135 7.0 10.0 8.5 2.6 213 chr2L 7629109 intergenic not near genes chr2L 7629216 intergenic not near genes chr2L 7629322 intergenic not near genes chr2L_25_7625001 chr2L_7625001 RAL-382 271 chr2L 7640379 7640416 chr2L 7640515 7640552 18 136 5.5 4.5 5.0 3.0 173 chr2L 7640379 intergenic not near genes chr2L 7640466 intergenic not near genes chr2L 7640552 intergenic not near genes chr2L_18_7640001 chr2L_7640001 RAL-382 272 chr2L 7649977 7650045 chr2L 7650103 7650183 20 133 5.0 0.0 2.5 5.7 206 chr2L 7649977 intron Slob - chr2L 7650080 intron Slob - chr2L 7650183 intron Slob - chr2L_20_7650001 chr2L_7650001 RAL-382 273 chr2L 7702491 7702562 chr2L 7702633 7702704 29 141 8.5 6.5 7.5 3.4 213 chr2L 7702491 intergenic Tep3 + chr2L 7702598 intergenic Tep3 + chr2L 7702704 intergenic Tep3 + chr2L_29_7700001 chr2L_7700001 RAL-382 274 chr2L 7704665 7704724 chr2L 7704853 7704902 25 187 1.5 8.0 4.8 4.3 237 chr2L 7704665 intron Tep3 + chr2L 7704784 intron Tep3 + chr2L 7704902 intron Tep3 + chr2L_25_7700001 chr2L_7700001 RAL-382 275 chr2L 7748641 7748709 chr2L 7748788 7748856 19 145 7.5 7.5 7.5 2.2 215 chr2L 7748641 intergenic not near genes chr2L 7748748 intergenic not near genes chr2L 7748856 intergenic not near genes chr2L_19_7745001 chr2L_7745001 RAL-382 276 chr2L 7766580 7766661 chr2L 7766706 7766787 21 116 8.5 10.5 9.5 2.0 207 chr2L 7766580 intergenic not near genes chr2L 7766684 intergenic not near genes chr2L 7766787 intergenic not near genes chr2L_21_7765001 chr2L_7765001 RAL-382 277 chr2L 7770036 7770109 chr2L 7770217 7770290 31 181 5.5 7.5 6.5 4.1 254 chr2L 7770036 intron CG7191 + chr2L 7770163 intron CG7191 + chr2L 7770290 intron CG7191 + chr2L_31_7770001 chr2L_7770001 RAL-382 278 chr2L 7770560 7770589 chr2L 7770731 7770760 6 171 7.0 2.5 4.8 1.0 200 chr2L 7770560 intron CG7191 + chr2L 7770660 intron CG7191 + chr2L 7770760 intron CG7191 + chr2L_6_7770001 chr2L_7770001 RAL-382 279 chr2L 7867525 7867590 chr2L 7867669 7867734 32 144 8.5 2.0 5.2 5.2 209 chr2L 7867525 intron Proc - chr2L 7867630 intron Proc - chr2L 7867734 intron Proc - chr2L_32_7865001 chr2L_7865001 RAL-382 280 chr2L 7887656 7887676 chr2L 7887788 7887808 12 132 5.5 14.5 10.0 1.1 152 chr2L 7887656 intergenic Spn28Da -,CG7102 - chr2L 7887732 3` UTR Spn28Da - chr2L 7887808 exon Spn28Da - chr2L_12_7885001 chr2L_7885001 RAL-382 281 chr2L 7942460 7942516 chr2L 7942598 7942654 24 137 13.0 10.5 11.8 1.9 194 chr2L 7942460 intron Snoo - chr2L 7942557 intron Snoo - chr2L 7942654 intron Snoo - chr2L_24_7940001 chr2L_7940001 RAL-382 282 chr2L 7977046 7977103 chr2L 7984066 7984127 297 26 7020 8.5 7.0 7.8 3.0 7081 chr2L 7977046 intron Snoo - chr2L 7980586 intron Snoo - chr2L 7984127 intron,5` UTR Snoo -,CG7231 + chr2L_26_7980001 chr2L_7980001 RAL-382 283 chr2L 7986879 7986917 chr2L 7987015 7987054 15 137 9.0 19.0 14.0 1.0 175 chr2L 7986879 3` UTR pes - chr2L 7986966 3` UTR pes - chr2L 7987054 3` UTR pes - chr2L_15_7985001 chr2L_7985001 RAL-382 284 chr2L 8013565 8013582 chr2L 8018820 8018837 copia 9 5254 23.5 0.0 11.8 0.7 5272 chr2L 8013565 intron Tg + chr2L 8016201 intron Tg + chr2L 8018837 intron Tg + chr2L_9_8015001 chr2L_8015001 RAL-382 285 chr2L 8013594 8013644 chr2L 8023580 8023630 copia 16 9986 9.5 8.0 8.8 1.6 10036 chr2L 8013594 intron Tg + chr2L 8018612 intron Tg + chr2L 8023630 intron Tg + chr2L_16_8015001 chr2L_8015001 RAL-382 286 chr2L 8034557 8034832 chr2L 8034708 8034963 13 142 12.5 12.0 12.2 1.0 406 chr2L 8034557 intron,intron CG7367 -,Cka + chr2L 8034760 intron,intron CG7367 -,Cka + chr2L 8034963 intron,intron CG7367 -,Cka + chr2L_13_8030001 chr2L_8030001 RAL-382 287 chr2L 8171282 8171294 chr2L 8171413 8171425 5 131 0.0 9.0 4.5 0.9 143 chr2L 8171282 intron Piezo + chr2L 8171354 intron Piezo + chr2L 8171425 intron Piezo + chr2L_5_8170001 chr2L_8170001 RAL-382 288 chr2L 8185442 8185515 chr2L 8185580 8185654 11 135 0.0 13.0 6.5 1.5 212 chr2L 8185442 intron Piezo + chr2L 8185548 intron Piezo + chr2L 8185654 intron Piezo + chr2L_11_8185001 chr2L_8185001 RAL-382 289 chr2L 8286259 8286326 chr2L 8286386 8286475 16 144 6.0 0.0 3.0 4.0 216 chr2L 8286259 intron Btk29A - chr2L 8286367 intron Btk29A - chr2L 8286475 intron Btk29A - chr2L_16_8285001 chr2L_8285001 RAL-382 290 chr2L 8322916 8322935 chr2L 8323042 8323061 9 126 3.5 9.0 6.2 1.2 145 chr2L 8322916 exon CG7781 - chr2L 8322988 intron CG7781 - chr2L 8323061 intron CG7781 - chr2L_9_8320001 chr2L_8320001 RAL-382 291 chr2L 8323654 8323730 chr2L 8323804 8323880 21 141 1.5 8.5 5.0 3.5 226 chr2L 8323654 intron CG7781 - chr2L 8323767 intron CG7781 - chr2L 8323880 intron CG7781 - chr2L_21_8320001 chr2L_8320001 RAL-382 292 chr2L 8336902 8336944 chr2L 8337031 8337073 13 126 0.0 6.5 3.2 3.1 171 chr2L 8336902 intergenic not near genes chr2L 8336988 intergenic not near genes chr2L 8337073 intergenic not near genes chr2L_13_8335001 chr2L_8335001 RAL-382 293 chr2L 8349559 8349631 chr2L 8349714 8349776 23 148 5.5 6.0 5.8 3.4 217 chr2L 8349559 exon CG7778 + chr2L 8349668 intron CG7778 + chr2L 8349776 exon CG7778 + chr2L_23_8345001 chr2L_8345001 RAL-382 294 chr2L 8351511 8351584 chr2L 8351638 8351711 15 127 0.0 7.0 3.5 3.3 200 chr2L 8351511 intergenic CG7778 + chr2L 8351611 intergenic CG7778 + chr2L 8351711 intergenic Mur29B + chr2L_15_8350001 chr2L_8350001 RAL-382 295 chr2L 8452377 8452446 chr2L 8461598 8461667 roo 35 9220 11.0 9.5 10.2 3.1 9290 chr2L 8452377 intron fu12 - chr2L 8457022 intron fu12 - chr2L 8461667 intron fu12 - chr2L_35_8455001 chr2L_8455001 RAL-382 296 chr2L 8461792 8461875 chr2L 8461923 8461965 29 129 10.0 14.0 12.0 2.2 173 chr2L 8461792 intron fu12 - chr2L 8461878 intron fu12 - chr2L 8461965 intron fu12 - chr2L_29_8460001 chr2L_8460001 RAL-382 297 chr2L 8502610 8502685 chr2L 8502744 8502819 28 131 12.5 6.0 9.2 2.7 209 chr2L 8502610 intron Dh31 - chr2L 8502714 intron Dh31 - chr2L 8502819 intron Dh31 - chr2L_28_8500001 chr2L_8500001 RAL-382 298 chr2L 8538119 8538194 chr2L 8538245 8538330 11 129 7.0 1.5 4.2 2.1 211 chr2L 8538119 intron CG17834 + chr2L 8538224 intron CG17834 + chr2L 8538330 intron CG17834 + chr2L_11_8535001 chr2L_8535001 RAL-382 299 chr2L 8612804 8612870 chr2L 8612931 8612997 31 127 11.0 14.0 12.5 2.3 193 chr2L 8612804 intron Sema-1a + chr2L 8612900 intron Sema-1a + chr2L 8612997 intron Sema-1a + chr2L_31_8610001 chr2L_8610001 RAL-382 300 chr2L 8687035 8687093 chr2L 8687189 8687247 25 154 4.0 10.0 7.0 3.1 212 chr2L 8687035 3` UTR Trs23 + chr2L 8687141 intergenic Hnf4 -,Trs23 + chr2L 8687247 3` UTR Hnf4 - chr2L_25_8685001 chr2L_8685001 RAL-382 301 chr2L 8704895 8704969 chr2L 8705124 8705198 36 227 11.5 5.5 8.5 3.8 303 chr2L 8704895 intron,5` UTR Hnf4 -,CR44992 + chr2L 8705046 intron,5` UTR Hnf4 -,CR44992 + chr2L 8705198 intron,5` UTR Hnf4 -,CR44992 + chr2L_36_8705001 chr2L_8705001 RAL-382 302 chr2L 8723077 8723145 chr2L 8731498 8731524 Tirant 20 8421 11.0 4.0 7.5 2.4 8447 chr2L 8723077 intron raw - chr2L 8727300 intron raw - chr2L 8731524 intron raw - chr2L_20_8725001 chr2L_8725001 RAL-382 303 chr2L 8799760 8799823 chr2L 8799926 8799983 28 165 7.5 9.5 8.5 2.9 223 chr2L 8799760 intergenic not near genes chr2L 8799872 intergenic not near genes chr2L 8799983 intergenic not near genes chr2L_28_8795001 chr2L_8795001 RAL-382 304 chr2L 8813821 8813860 chr2L 8813948 8813965 7 122 4.5 11.5 8.0 0.8 144 chr2L 8813821 intergenic not near genes chr2L 8813893 intergenic not near genes chr2L 8813965 intergenic not near genes chr2L_7_8810001 chr2L_8810001 RAL-382 305 chr2L 8886533 8886561 chr2L 8886670 8886695 4 136 7.5 4.0 5.8 0.6 162 chr2L 8886533 intergenic CR44415 - chr2L 8886614 intergenic CR44415 - chr2L 8886695 intergenic CR44415 - chr2L_4_8885001 chr2L_8885001 RAL-382 306 chr2L 8956235 8956244 chr2L 8956361 8956370 7 126 8.0 7.0 7.5 0.8 135 chr2L 8956235 intron CG31886 - chr2L 8956302 intron CG31886 - chr2L 8956370 intron CG31886 - chr2L_7_8955001 chr2L_8955001 RAL-382 307 chr2L 8963361 8963368 chr2L 8965676 8965683 8 2315 19.5 35.5 27.5 0.3 2322 chr2L 8963361 exon CG32985 + chr2L 8964522 exon CG32985 + chr2L 8965683 exon CG32984 + chr2L_8_8960001 chr2L_8960001 RAL-382 308 chr2L 8976200 8976222 chr2L 8976341 8976359 8 141 0.0 16.5 8.2 0.9 159 chr2L 8976200 intergenic not near genes chr2L 8976280 intergenic not near genes chr2L 8976359 intergenic not near genes chr2L_8_8975001 chr2L_8975001 RAL-382 309 chr2L 8976223 8976256 chr2L 8976325 8976337 16 132 0.0 14.0 7.0 2.0 114 chr2L 8976223 intergenic not near genes chr2L 8976280 intergenic not near genes chr2L 8976337 intergenic not near genes chr2L_16_8975001 chr2L_8975001 RAL-382 310 chr2L 8987927 8987931 chr2L 8988059 8988063 4 132 6.0 8.5 7.2 0.5 136 chr2L 8987927 intron rost - chr2L 8987995 intron rost - chr2L 8988063 intron rost - chr2L_4_8985001 chr2L_8985001 RAL-382 311 chr2L 9000242 9000312 chr2L 9007801 9007898 roo 23 7561 9.5 0.5 5.0 3.8 7656 chr2L 9000242 intergenic Try29F + chr2L 9004070 intergenic not near genes chr2L 9007898 intergenic not near genes chr2L_23_9000001 chr2L_9000001 RAL-382 312 chr2L 9018029 9018079 chr2L 9018184 9018234 17 155 11.5 12.5 12.0 1.3 205 chr2L 9018029 intergenic not near genes chr2L 9018132 intergenic not near genes chr2L 9018234 intergenic not near genes chr2L_17_9015001 chr2L_9015001 RAL-382 313 chr2L 9084336 9084341 chr2L 16217660 16217660 15 7133321 24.0 31.0 27.5 0.5 7133324 chr2L 9084336 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_15_12650001 chr2L_12650001 RAL-382 314 chr2L 9195821 9195843 chr2L 9195954 9195976 6 133 16.5 7.5 12.0 0.5 155 chr2L 9195821 intron tai + chr2L 9195898 intron tai + chr2L 9195976 intron tai + chr2L_6_9195001 chr2L_9195001 RAL-382 315 chr2L 9195844 9195880 chr2L 9195931 9196013 17 128 7.5 6.5 7.0 2.1 169 chr2L 9195844 intron tai + chr2L 9195928 intron tai + chr2L 9196013 intron tai + chr2L_17_9195001 chr2L_9195001 RAL-382 316 chr2L 9217943 9218001 chr2L 9222780 9222846 Doc 13 4841 10.0 3.0 6.5 1.7 4903 chr2L 9217943 intron tai + chr2L 9220394 intron tai + chr2L 9222846 intron tai + chr2L_13_9220001 chr2L_9220001 RAL-382 317 chr2L 9227178 9227247 chr2L 9227311 9227344 9 125 3.5 7.5 5.5 1.4 166 chr2L 9227178 intron tai + chr2L 9227261 intron tai + chr2L 9227344 intron tai + chr2L_9_9225001 chr2L_9225001 RAL-382 318 chr2L 9251103 9251170 chr2L 9251250 9251317 25 144 6.0 6.0 6.0 3.6 214 chr2L 9251103 intergenic aust -,borr - chr2L 9251210 intergenic aust -,borr - chr2L 9251317 intergenic borr -,aust - chr2L_25_9250001 chr2L_9250001 RAL-382 319 chr2L 9259171 9259234 chr2L 9259314 9259377 16 134 6.0 2.5 4.2 3.1 206 chr2L 9259171 intron Ggamma30A + chr2L 9259274 intron Ggamma30A + chr2L 9259377 intron Ggamma30A + chr2L_16_9255001 chr2L_9255001 RAL-382 320 chr2L 9262067 9262138 chr2L 9262222 9262293 21 154 5.0 7.5 6.2 2.9 226 chr2L 9262067 intron,3` UTR Ggamma30A +,CR45262 - chr2L 9262180 intron,3` UTR Ggamma30A +,CR45262 - chr2L 9262293 intron,intron Ggamma30A +,CR45262 - chr2L_21_9260001 chr2L_9260001 RAL-382 321 chr2L 9286913 9286984 chr2L 9287041 9287112 27 123 9.5 5.5 7.5 3.2 199 chr2L 9286913 intron Ggamma30A + chr2L 9287012 intron Ggamma30A + chr2L 9287112 intron Ggamma30A + chr2L_27_9285001 chr2L_9285001 RAL-382 322 chr2L 9297329 9297402 chr2L 9297456 9297529 33 126 8.0 7.0 7.5 3.9 200 chr2L 9297329 3` UTR Ggamma30A + chr2L 9297429 3` UTR Ggamma30A + chr2L 9297529 3` UTR Ggamma30A + chr2L_33_9295001 chr2L_9295001 RAL-382 323 chr2L 9303478 9303546 chr2L 9303608 9303676 22 129 9.5 8.5 9.0 2.2 198 chr2L 9303478 intergenic not near genes chr2L 9303577 intergenic not near genes chr2L 9303676 intergenic not near genes chr2L_22_9300001 chr2L_9300001 RAL-382 324 chr2L 9317378 9317426 chr2L 9317546 9317818 12 280 5.5 0.0 2.8 3.2 440 chr2L 9317378 intergenic not near genes chr2L 9317598 intergenic not near genes chr2L 9317818 intergenic not near genes chr2L_12_9315001 chr2L_9315001 RAL-382 325 chr2L 9334968 9335045 chr2L 9335097 9335111 17 125 6.0 1.5 3.8 3.5 143 chr2L 9334968 intron Eaat1 + chr2L 9335040 intron Eaat1 + chr2L 9335111 intron Eaat1 + chr2L_17_9335001 chr2L_9335001 RAL-382 326 chr2L 9393454 9393524 chr2L 9396471 9396515 jockey 29 3015 6.0 6.0 6.0 4.1 3061 chr2L 9393454 intron Shawl - chr2L 9394984 intron Shawl - chr2L 9396515 intron Shawl - chr2L_29_9390001 chr2L_9390001 RAL-382 327 chr2L 9420992 9421024 chr2L 9421172 9421198 4 185 0.0 10.0 5.0 0.7 206 chr2L 9420992 intron Mco1 + chr2L 9421095 intron Mco1 + chr2L 9421198 intron Mco1 + chr2L_4_9420001 chr2L_9420001 RAL-382 328 chr2L 9439574 9439645 chr2L 9439702 9439778 21 128 4.5 3.0 3.8 4.4 204 chr2L 9439574 intron numb + chr2L 9439676 intron numb + chr2L 9439778 intron numb + chr2L_21_9435001 chr2L_9435001 RAL-382 329 chr2L 9454932 9455006 chr2L 9455084 9455160 19 153 9.5 7.0 8.2 2.1 228 chr2L 9454932 intron numb + chr2L 9455046 intron numb + chr2L 9455160 intron numb + chr2L_19_9455001 chr2L_9455001 RAL-382 330 chr2L 9457028 9457040 chr2L 9457155 9457167 8 127 21.0 4.0 12.5 0.6 139 chr2L 9457028 intron numb + chr2L 9457098 intron numb + chr2L 9457167 intron numb + chr2L_8_9455001 chr2L_9455001 RAL-382 331 chr2L 9457042 9457101 chr2L 9457149 9457203 23 121 11.0 4.0 7.5 2.7 161 chr2L 9457042 intron numb + chr2L 9457122 intron numb + chr2L 9457203 intron numb + chr2L_23_9455001 chr2L_9455001 RAL-382 332 chr2L 9470055 9470120 chr2L 9470184 9470249 22 129 7.5 7.5 7.5 2.6 194 chr2L 9470055 intergenic CR43769 + chr2L 9470152 intergenic CR43769 + chr2L 9470249 intergenic CR43769 + chr2L_22_9470001 chr2L_9470001 RAL-382 333 chr2L 9505480 9505499 chr2L 9505709 9505728 13 228 5.0 20.0 12.5 1.0 248 chr2L 9505480 intron CG33298 + chr2L 9505604 intron CG33298 + chr2L 9505728 intron CG33298 + chr2L_13_9505001 chr2L_9505001 RAL-382 334 chr2L 9506323 9506367 chr2L 9506461 9506505 20 138 4.5 11.0 7.8 2.3 182 chr2L 9506323 intron CG33298 + chr2L 9506414 intron CG33298 + chr2L 9506505 intron CG33298 + chr2L_20_9505001 chr2L_9505001 RAL-382 335 chr2L 9612802 9612817 chr2L 9612931 9612946 13 129 0.0 0.0 0.0 13.0 144 chr2L 9612802 intergenic gcm2 +,Trx-2 + chr2L 9612874 intergenic gcm2 +,Trx-2 + chr2L 9612946 intergenic Trx-2 +,gcm2 + chr2L_13_9610001 chr2L_9610001 RAL-382 336 chr2L 9619452 9619511 chr2L 9619839 9619898 25 386 12.5 7.0 9.8 2.3 446 chr2L 9619452 intron GlcAT-S + chr2L 9619675 intron GlcAT-S + chr2L 9619898 intron GlcAT-S + chr2L_25_9615001 chr2L_9615001 RAL-382 337 chr2L 9719737 9719780 chr2L 9719870 9719913 14 132 0.0 0.0 0.0 14.0 176 chr2L 9719737 intron Nckx30C - chr2L 9719825 intron Nckx30C - chr2L 9719913 intron Nckx30C - chr2L_14_9715001 chr2L_9715001 RAL-382 338 chr2L 9837384 9837442 chr2L 9837512 9837570 21 127 6.5 0.0 3.2 5.0 186 chr2L 9837384 intron nAChRalpha6 - chr2L 9837477 intron nAChRalpha6 - chr2L 9837570 intron nAChRalpha6 - chr2L_21_9835001 chr2L_9835001 RAL-382 339 chr2L 9871501 9871513 chr2L 9871640 9871652 7 139 22.5 10.5 16.5 0.4 151 chr2L 9871501 intron nAChRalpha6 - chr2L 9871576 intron nAChRalpha6 - chr2L 9871652 intron nAChRalpha6 - chr2L_7_9870001 chr2L_9870001 RAL-382 340 chr2L 9871516 9871564 chr2L 9871638 9871685 31 136 10.0 10.5 10.2 2.8 169 chr2L 9871516 intron nAChRalpha6 - chr2L 9871600 intron nAChRalpha6 - chr2L 9871685 intron nAChRalpha6 - chr2L_31_9870001 chr2L_9870001 RAL-382 341 chr2L 9892460 9892530 chr2L 9892586 9892656 16 124 6.0 6.0 6.0 2.3 196 chr2L 9892460 exon mtDNA-helicase - chr2L 9892558 intron mtDNA-helicase - chr2L 9892656 exon mtDNA-helicase - chr2L_16_9890001 chr2L_9890001 RAL-382 342 chr2L 9973695 9973755 chr2L 9980856 9980913 HMS-Beagle 27 7167 7.0 9.5 8.2 2.9 7218 chr2L 9973695 intergenic not near genes chr2L 9977304 intergenic not near genes chr2L 9980913 intergenic not near genes chr2L_27_9975001 chr2L_9975001 RAL-382 343 chr2L 9991136 9991154 chr2L 9991290 9991308 7 154 17.5 0.5 9.0 0.7 172 chr2L 9991136 intron bib + chr2L 9991222 intron bib + chr2L 9991308 intron bib + chr2L_7_9990001 chr2L_9990001 RAL-382 344 chr2L 9991158 9991207 chr2L 9991288 9991344 20 144 7.0 0.5 3.8 4.2 186 chr2L 9991158 intron bib + chr2L 9991251 intron bib + chr2L 9991344 intron bib + chr2L_20_9990001 chr2L_9990001 RAL-382 345 chr2L 10051712 10051752 chr2L 10051818 10051836 11 120 7.0 5.0 6.0 1.6 124 chr2L 10051712 5` UTR CR44874 + chr2L 10051774 5` UTR CR44874 + chr2L 10051836 5` UTR CR44874 + chr2L_11_10050001 chr2L_10050001 RAL-382 346 chr2L 10131241 10131319 chr2L 10131382 10131461 40 140 6.5 8.0 7.2 4.9 220 chr2L 10131241 intron CG44153 - chr2L 10131351 intron CG44153 - chr2L 10131461 intron CG44153 - chr2L_40_10130001 chr2L_10130001 RAL-382 347 chr2L 10138153 10138192 chr2L 10143449 10143488 Rt1c 16 5295 12.5 14.0 13.2 1.1 5335 chr2L 10138153 intron CG44153 - chr2L 10140820 intron CG44153 - chr2L 10143488 intron CG44153 - chr2L_16_10140001 chr2L_10140001 RAL-382 348 chr2L 10153181 10153234 chr2L 10153283 10153314 19 116 6.0 7.0 6.5 2.5 133 chr2L 10153181 intron,exon CG44153 -,CG4839 + chr2L 10153248 intron,intron CG44153 -,CG4839 + chr2L 10153314 intron,intron CG44153 -,CG4839 + chr2L_19_10150001 chr2L_10150001 RAL-382 349 chr2L 10156288 10156315 chr2L 10163808 10163835 blood 11 7520 18.0 12.5 15.2 0.7 7547 chr2L 10156288 intron,3` UTR CG44153 -,CG4839 + chr2L 10160062 intron CG44153 - chr2L 10163835 intron CG44153 - chr2L_11_10160001 chr2L_10160001 RAL-382 350 chr2L 10156321 10156349 chr2L 10163802 10163869 blood 10 7513 10.0 11.0 10.5 0.9 7548 chr2L 10156321 intron,3` UTR CG44153 -,CG4839 + chr2L 10160095 intron CG44153 - chr2L 10163869 intron CG44153 - chr2L_10_10160001 chr2L_10160001 RAL-382 351 chr2L 10180543 10180562 chr2L 10180680 10180682 9 134 10.5 0.0 5.2 1.5 139 chr2L 10180543 intergenic CG44153 - chr2L 10180612 intergenic CG44153 - chr2L 10180682 intergenic CG44153 - chr2L_9_10180001 chr2L_10180001 RAL-382 352 chr2L 10209797 10209822 chr2L 10209924 10209949 13 127 15.5 5.5 10.5 1.1 152 chr2L 10209797 intergenic CR44845 +,CG5731 -,CG5727 - chr2L 10209873 3` UTR CG5727 - chr2L 10209949 3` UTR CG5727 - chr2L_13_10205001 chr2L_10205001 RAL-382 353 chr2L 10239742 10239796 chr2L 10239919 10239973 30 177 13.0 14.0 13.5 2.1 231 chr2L 10239742 intron me31B + chr2L 10239858 intron me31B + chr2L 10239973 intron me31B + chr2L_30_10235001 chr2L_10235001 RAL-382 354 chr2L 10294130 10294196 chr2L 10294256 10294322 30 125 6.0 6.5 6.2 4.2 192 chr2L 10294130 intron Hand - chr2L 10294226 intron Hand - chr2L 10294322 intron Hand - chr2L_30_10290001 chr2L_10290001 RAL-382 355 chr2L 10294626 10294690 chr2L 10294762 10294826 28 136 12.5 6.0 9.2 2.7 200 chr2L 10294626 exon Hand - chr2L 10294726 intron Hand - chr2L 10294826 intron Hand - chr2L_28_10290001 chr2L_10290001 RAL-382 356 chr2L 10447024 10447095 chr2L 10447184 10447254 14 159 3.0 7.5 5.2 2.3 230 chr2L 10447024 intron loh + chr2L 10447139 intron loh + chr2L 10447254 intron loh + chr2L_14_10445001 chr2L_10445001 RAL-382 357 chr2L 10458178 10458212 chr2L 10458324 10458358 11 146 0.0 7.0 3.5 2.4 180 chr2L 10458178 intron LM408 + chr2L 10458268 intron LM408 + chr2L 10458358 intron LM408 + chr2L_11_10455001 chr2L_10455001 RAL-382 358 chr2L 10474340 10474414 chr2L 10474469 10474545 33 125 5.5 9.5 7.5 3.9 205 chr2L 10474340 5` UTR RluA-1 - chr2L 10474442 intergenic RluA-1 - chr2L 10474545 intergenic RluA-1 - chr2L_33_10470001 chr2L_10470001 RAL-382 359 chr2L 10480263 10480333 chr2L 10480391 10480479 17 127 0.0 0.0 0.0 17.0 216 chr2L 10480263 intron RluA-2 + chr2L 10480371 intron RluA-2 + chr2L 10480479 intron RluA-2 + chr2L_17_10480001 chr2L_10480001 RAL-382 360 chr2L 10495261 10495464 chr2L 10495387 10495600 30 132 2.0 3.0 2.5 8.6 339 chr2L 10495261 intron Myo31DF - chr2L 10495430 intron Myo31DF - chr2L 10495600 intron Myo31DF - chr2L_30_10495001 chr2L_10495001 RAL-382 361 chr2L 10515316 10515388 chr2L 10515459 10515531 28 143 12.5 10.5 11.5 2.2 215 chr2L 10515316 intron,intron CG45083 -,Fatp - chr2L 10515424 intron,intron CG45083 -,Fatp - chr2L 10515531 intron,intron CG45083 -,Fatp - chr2L_28_10515001 chr2L_10515001 RAL-382 362 chr2L 10522357 10522358 chr2L 16071771 16071771 4 5549413 19.0 25.0 22.0 0.2 5549414 chr2L 10522357 intergenic not near genes chr2L 13297064 intron CG31729 + chr2L 16071771 intron beat-Ia + chr2L_4_13295001 chr2L_13295001 RAL-382 363 chr2L 10524701 10524879 chr2L 10524855 10525037 26 156 0.0 0.0 0.0 26.0 336 chr2L 10524701 intergenic not near genes chr2L 10524869 intergenic not near genes chr2L 10525037 intergenic not near genes chr2L_26_10520001 chr2L_10520001 RAL-382 364 chr2L 10540827 10540880 chr2L 10540954 10541008 20 125 6.5 8.5 7.5 2.4 181 chr2L 10540827 intergenic not near genes chr2L 10540918 intergenic not near genes chr2L 10541008 intergenic not near genes chr2L_20_10540001 chr2L_10540001 RAL-382 365 chr2L 10563871 10563910 chr2L 10564014 10564053 10 143 4.0 10.5 7.2 1.2 182 chr2L 10563871 intron Trim9 + chr2L 10563962 intron Trim9 + chr2L 10564053 intron Trim9 + chr2L_10_10560001 chr2L_10560001 RAL-382 366 chr2L 10563911 10563943 chr2L 10564012 10564086 6 133 2.5 10.0 6.2 0.8 175 chr2L 10563911 intron Trim9 + chr2L 10563998 intron Trim9 + chr2L 10564086 intron Trim9 + chr2L_6_10560001 chr2L_10560001 RAL-382 367 chr2L 10580644 10580669 chr2L 10580770 10580795 11 126 15.0 10.5 12.8 0.8 151 chr2L 10580644 intron Trim9 + chr2L 10580720 intron Trim9 + chr2L 10580795 intron Trim9 + chr2L_11_10580001 chr2L_10580001 RAL-382 368 chr2L 10580673 10580707 chr2L 10580767 10580796 15 115 6.0 10.0 8.0 1.7 123 chr2L 10580673 intron Trim9 + chr2L 10580734 intron Trim9 + chr2L 10580796 intron Trim9 + chr2L_15_10580001 chr2L_10580001 RAL-382 369 chr2L 10592798 10592865 chr2L 10600510 10600577 opus 25 7712 9.5 10.0 9.8 2.3 7779 chr2L 10592798 intron Trim9 + chr2L 10596688 intron Trim9 + chr2L 10600577 intron Trim9 + chr2L_25_10595001 chr2L_10595001 RAL-382 370 chr2L 10678998 10679038 chr2L 10679163 10679163 5 146 11.5 1.0 6.2 0.7 165 chr2L 10678998 exon CG17104 + chr2L 10679080 exon CG17104 + chr2L 10679163 exon CG17104 + chr2L_5_10675001 chr2L_10675001 RAL-382 371 chr2L 10698079 10698154 chr2L 10698212 10698287 49 131 6.0 6.5 6.2 6.8 208 chr2L 10698079 5` UTR CR44181 + chr2L 10698183 5` UTR CR44181 + chr2L 10698287 intergenic CR44181 +,CG7300 - chr2L_49_10695001 chr2L_10695001 RAL-382 372 chr2L 10698523 10698595 chr2L 10698656 10698738 26 137 0.5 5.5 3.0 6.5 215 chr2L 10698523 intergenic CR44181 +,CG7300 - chr2L 10698630 intergenic CR44181 + chr2L 10698738 intergenic not near genes chr2L_26_10695001 chr2L_10695001 RAL-382 373 chr2L 10713561 10713589 chr2L 10713695 10713723 12 134 7.5 13.5 10.5 1.0 162 chr2L 10713561 intergenic not near genes chr2L 10713642 intergenic not near genes chr2L 10713723 intergenic not near genes chr2L_12_10710001 chr2L_10710001 RAL-382 374 chr2L 10713591 10713621 chr2L 10713673 10713734 9 124 4.0 7.0 5.5 1.4 143 chr2L 10713591 intergenic not near genes chr2L 10713662 intergenic not near genes chr2L 10713734 intergenic not near genes chr2L_9_10710001 chr2L_10710001 RAL-382 375 chr2L 10723487 10723550 chr2L 10723631 10723694 21 144 5.5 5.5 5.5 3.2 207 chr2L 10723487 intergenic not near genes chr2L 10723590 intergenic not near genes chr2L 10723694 intergenic not near genes chr2L_21_10720001 chr2L_10720001 RAL-382 376 chr2L 10760114 10760124 chr2L 10760255 10760280 8 151 10.5 8.0 9.2 0.8 166 chr2L 10760114 intergenic not near genes chr2L 10760197 intergenic not near genes chr2L 10760280 intergenic not near genes chr2L_8_10760001 chr2L_10760001 RAL-382 377 chr2L 10760125 10760158 chr2L 10760245 10760305 9 139 7.0 4.0 5.5 1.4 180 chr2L 10760125 intergenic not near genes chr2L 10760215 intergenic not near genes chr2L 10760305 intergenic not near genes chr2L_9_10760001 chr2L_10760001 RAL-382 378 chr2L 10787932 10788028 chr2L 10788074 10788154 10 136 0.0 0.0 0.0 10.0 222 chr2L 10787932 intron CG31869 - chr2L 10788043 intron CG31869 - chr2L 10788154 intron CG31869 - chr2L_10_10785001 chr2L_10785001 RAL-382 379 chr2L 10836709 10836781 chr2L 10836838 10836909 29 128 6.5 6.5 6.5 3.9 200 chr2L 10836709 intron Nos - chr2L 10836809 intron Nos - chr2L 10836909 intron Nos - chr2L_29_10835001 chr2L_10835001 RAL-382 380 chr2L 10847024 10847054 chr2L 10847153 10847183 14 128 21.5 10.0 15.8 0.8 159 chr2L 10847024 5` UTR Porin2 - chr2L 10847104 intergenic Porin2 -,porin - chr2L 10847183 intergenic Porin2 -,porin - chr2L_14_10845001 chr2L_10845001 RAL-382 381 chr2L 10847055 10847083 chr2L 10847147 10847212 12 126 11.5 8.0 9.8 1.1 157 chr2L 10847055 intergenic Porin2 -,porin - chr2L 10847134 intergenic Porin2 -,porin - chr2L 10847212 intergenic Porin2 -,porin - chr2L_12_10845001 chr2L_10845001 RAL-382 382 chr2L 10850944 10850987 chr2L 10851075 10851118 13 130 5.5 9.5 7.5 1.5 174 chr2L 10850944 intron CG43129 + chr2L 10851031 intron CG43129 + chr2L 10851118 intron CG43129 + chr2L_13_10850001 chr2L_10850001 RAL-382 383 chr2L 10862833 10862865 chr2L 10864466 10864522 Rt1c 6 1655 8.0 9.0 8.5 0.6 1689 chr2L 10862833 3` UTR CR43807 - chr2L 10863678 intron CR43807 - chr2L 10864522 3` UTR CR43807 - chr2L_6_10860001 chr2L_10860001 RAL-382 384 chr2L 10876527 10876569 chr2L 10883635 10883677 297 10 7104 6.5 11.5 9.0 1.0 7150 chr2L 10876527 intergenic not near genes chr2L 10880102 intergenic not near genes chr2L 10883677 intergenic not near genes chr2L_10_10880001 chr2L_10880001 RAL-382 385 chr2L 10946913 10946971 chr2L 10956178 10956221 roo 8 9263 7.5 6.0 6.8 1.0 9308 chr2L 10946913 intron dpr2 - chr2L 10951567 intron dpr2 - chr2L 10956221 intron dpr2 - chr2L_8_10950001 chr2L_10950001 RAL-382 386 chr2L 11056521 11056594 chr2L 11056653 11056721 32 132 8.5 8.5 8.5 3.4 200 chr2L 11056521 intron Samuel - chr2L 11056621 intron Samuel - chr2L 11056721 intron Samuel - chr2L_32_11055001 chr2L_11055001 RAL-382 387 chr2L 11174611 11174660 chr2L 11174731 11174745 6 112 3.0 12.0 7.5 0.7 134 chr2L 11174611 intron Ca-beta - chr2L 11174678 intron Ca-beta - chr2L 11174745 intron Ca-beta - chr2L_6_11170001 chr2L_11170001 RAL-382 388 chr2L 11174928 11174994 chr2L 11175085 11175151 13 157 6.0 5.5 5.8 1.9 223 chr2L 11174928 intron Ca-beta - chr2L 11175040 intron Ca-beta - chr2L 11175151 intron Ca-beta - chr2L_13_11175001 chr2L_11175001 RAL-382 389 chr2L 11189195 11189227 chr2L 11189342 11189374 15 147 11.5 0.0 5.8 2.2 179 chr2L 11189195 intron Ca-beta - chr2L 11189284 intron Ca-beta - chr2L 11189374 intron Ca-beta - chr2L_15_11185001 chr2L_11185001 RAL-382 390 chr2L 11228157 11228203 chr2L 11228279 11228330 11 123 12.5 11.5 12.0 0.8 173 chr2L 11228157 intron ab + chr2L 11228244 intron ab + chr2L 11228330 intron ab + chr2L_11_11225001 chr2L_11225001 RAL-382 391 chr2L 11315225 11315271 chr2L 11317679 11317713 G2 11 2451 7.0 7.0 7.0 1.4 2488 chr2L 11315225 intergenic not near genes chr2L 11316469 intergenic not near genes chr2L 11317713 intergenic not near genes chr2L_11_11315001 chr2L_11315001 RAL-382 392 chr2L 11381760 11381779 chr2L 11381945 11381963 10 185 7.0 4.5 5.8 1.5 203 chr2L 11381760 intergenic not near genes chr2L 11381862 intergenic not near genes chr2L 11381963 intergenic not near genes chr2L_10_11380001 chr2L_11380001 RAL-382 393 chr2L 11395002 11395051 chr2L 11395134 11395183 23 132 8.0 8.5 8.2 2.5 181 chr2L 11395002 intergenic not near genes chr2L 11395092 intergenic not near genes chr2L 11395183 intergenic not near genes chr2L_23_11395001 chr2L_11395001 RAL-382 394 chr2L 11399475 11399529 chr2L 11399605 11399656 12 127 6.5 0.0 3.2 2.9 181 chr2L 11399475 intergenic not near genes chr2L 11399566 intergenic not near genes chr2L 11399656 intergenic not near genes chr2L_12_11395001 chr2L_11395001 RAL-382 395 chr2L 11418613 11418686 chr2L 11418742 11418815 22 128 7.5 9.5 8.5 2.3 202 chr2L 11418613 intergenic not near genes chr2L 11418714 intergenic not near genes chr2L 11418815 intergenic not near genes chr2L_22_11415001 chr2L_11415001 RAL-382 396 chr2L 11424392 11424463 chr2L 11424934 11425005 29 538 8.0 6.0 7.0 3.6 613 chr2L 11424392 intergenic not near genes chr2L 11424698 intergenic not near genes chr2L 11425005 intergenic not near genes chr2L_29_11420001 chr2L_11420001 RAL-382 397 chr2L 11450071 11450150 chr2L 11450207 11450282 23 134 0.0 7.0 3.5 5.1 211 chr2L 11450071 intergenic not near genes chr2L 11450176 intergenic not near genes chr2L 11450282 intergenic not near genes chr2L_23_11450001 chr2L_11450001 RAL-382 398 chr2L 11492978 11492996 chr2L 11493160 11493186 9 188 0.0 5.0 2.5 2.6 208 chr2L 11492978 intergenic not near genes chr2L 11493082 intergenic not near genes chr2L 11493186 intergenic not near genes chr2L_9_11490001 chr2L_11490001 RAL-382 399 chr2L 11496585 11496654 chr2L 11496713 11496782 36 128 5.5 14.0 9.8 3.3 197 chr2L 11496585 intergenic CG6488 - chr2L 11496684 intergenic CG6488 - chr2L 11496782 intergenic CG6488 - chr2L_36_11495001 chr2L_11495001 RAL-382 400 chr2L 11537156 11537184 chr2L 11537287 11537314 4 123 11.5 6.0 8.8 0.4 158 chr2L 11537156 intergenic CG43438 + chr2L 11537235 intergenic CG43438 + chr2L 11537314 intergenic CG43438 + chr2L_4_11535001 chr2L_11535001 RAL-382 401 chr2L 11540548 11540603 chr2L 11548000 11548055 Tabor 25 7452 15.0 13.0 14.0 1.7 7507 chr2L 11540548 intergenic not near genes chr2L 11544302 intergenic not near genes chr2L 11548055 intergenic not near genes chr2L_25_11540001 chr2L_11540001 RAL-382 402 chr2L 11555379 11555430 chr2L 11555529 11555599 17 166 7.0 3.5 5.2 2.7 220 chr2L 11555379 intergenic not near genes chr2L 11555489 intergenic not near genes chr2L 11555599 intergenic not near genes chr2L_17_11555001 chr2L_11555001 RAL-382 403 chr2L 11563597 11563629 chr2L 11568851 11568882 copia 7 5251 11.5 9.5 10.5 0.6 5285 chr2L 11563597 intergenic not near genes chr2L 11566240 intergenic not near genes chr2L 11568882 intergenic not near genes chr2L_7_11565001 chr2L_11565001 RAL-382 404 chr2L 11563639 11563659 chr2L 11568842 11568913 copia 11 5241 6.0 7.0 6.5 1.5 5274 chr2L 11563639 intergenic not near genes chr2L 11566276 intergenic not near genes chr2L 11568913 intergenic not near genes chr2L_11_11565001 chr2L_11565001 RAL-382 405 chr2L 11570216 11570281 chr2L 11570663 11570728 25 446 9.0 8.5 8.8 2.6 512 chr2L 11570216 intergenic not near genes chr2L 11570472 intergenic not near genes chr2L 11570728 intergenic not near genes chr2L_25_11570001 chr2L_11570001 RAL-382 406 chr2L 11610522 11610575 chr2L 11610650 11610703 28 127 6.5 10.0 8.2 3.0 181 chr2L 11610522 intron,3` UTR kek2 +,spag4 - chr2L 11610612 intron,3` UTR kek2 +,spag4 - chr2L 11610703 intron,intron kek2 +,spag4 - chr2L_28_11610001 chr2L_11610001 RAL-382 407 chr2L 11612621 11612684 chr2L 11612759 11612820 25 138 9.5 6.5 8.0 2.8 199 chr2L 11612621 intron kek2 + chr2L 11612720 intron kek2 + chr2L 11612820 intron kek2 + chr2L_25_11610001 chr2L_11610001 RAL-382 408 chr2L 11614010 11614033 chr2L 11615555 11615578 hopper2 5 1544 16.0 7.5 11.8 0.4 1568 chr2L 11614010 intron kek2 + chr2L 11614794 intron kek2 + chr2L 11615578 intron kek2 + chr2L_5_11610001 chr2L_11610001 RAL-382 409 chr2L 11614037 11614075 chr2L 11615545 11615618 hopper2 9 1525 8.5 6.5 7.5 1.1 1581 chr2L 11614037 intron kek2 + chr2L 11614828 intron kek2 + chr2L 11615618 intron kek2 + chr2L_9_11610001 chr2L_11610001 RAL-382 410 chr2L 11659256 11659326 chr2L 11659385 11659455 32 128 5.5 7.5 6.5 4.3 199 chr2L 11659256 intergenic not near genes chr2L 11659356 intergenic not near genes chr2L 11659455 intergenic not near genes chr2L_32_11655001 chr2L_11655001 RAL-382 411 chr2L 11663194 11663271 chr2L 11663331 11663390 22 130 5.5 10.0 7.8 2.5 196 chr2L 11663194 intergenic CG44477 + chr2L 11663292 5` UTR CG44477 + chr2L 11663390 exon CG44477 + chr2L_22_11660001 chr2L_11660001 RAL-382 412 chr2L 11704630 11704667 chr2L 11704709 11704793 16 122 6.0 10.5 8.2 1.7 163 chr2L 11704630 intergenic not near genes chr2L 11704712 intergenic not near genes chr2L 11704793 intergenic not near genes chr2L_16_11700001 chr2L_11700001 RAL-382 413 chr2L 11710116 11710127 chr2L 11710240 11710253 7 126 7.0 0.0 3.5 1.6 137 chr2L 11710116 intergenic not near genes chr2L 11710184 intergenic not near genes chr2L 11710253 intergenic not near genes chr2L_7_11710001 chr2L_11710001 RAL-382 414 chr2L 11713466 11713530 chr2L 11720977 11721048 blood 31 7514 8.5 6.5 7.5 3.6 7582 chr2L 11713466 intergenic not near genes chr2L 11717257 intergenic not near genes chr2L 11721048 intergenic CR44143 + chr2L_31_11715001 chr2L_11715001 RAL-382 415 chr2L 11736498 11736574 chr2L 11736629 11736638 23 125 8.0 9.0 8.5 2.4 140 chr2L 11736498 5` UTR CR44145 + chr2L 11736568 5` UTR CR44145 + chr2L 11736638 5` UTR CR44145 + chr2L_23_11735001 chr2L_11735001 RAL-382 416 chr2L 11752744 11752820 chr2L 11752902 11752979 19 156 1.0 7.5 4.2 3.7 235 chr2L 11752744 intergenic CG42470 - chr2L 11752862 intergenic CG42470 - chr2L 11752979 3` UTR CG42470 - chr2L_19_11750001 chr2L_11750001 RAL-382 417 chr2L 11825657 11825668 chr2L 11825786 11825797 6 128 19.5 0.0 9.8 0.6 140 chr2L 11825657 intron Pde1c - chr2L 11825727 intron Pde1c - chr2L 11825797 intron Pde1c - chr2L_6_11825001 chr2L_11825001 RAL-382 418 chr2L 11879290 11879365 chr2L 11879514 11879578 27 220 5.0 4.0 4.5 4.9 288 chr2L 11879290 intron Pde1c - chr2L 11879434 intron Pde1c - chr2L 11879578 intron Pde1c - chr2L_27_11875001 chr2L_11875001 RAL-382 419 chr2L 11932121 11932196 chr2L 11932250 11932325 27 127 9.0 7.5 8.2 2.9 204 chr2L 11932121 intergenic not near genes chr2L 11932223 intergenic not near genes chr2L 11932325 intergenic not near genes chr2L_27_11930001 chr2L_11930001 RAL-382 420 chr2L 11944394 11944410 chr2L 11944533 11944550 6 136 22.0 0.0 11.0 0.5 156 chr2L 11944394 intron Cry + chr2L 11944472 intron Cry + chr2L 11944550 intron Cry + chr2L_6_11940001 chr2L_11940001 RAL-382 421 chr2L 11944414 11944446 chr2L 11944531 11944546 5 127 14.5 0.0 7.2 0.6 132 chr2L 11944414 intron Cry + chr2L 11944480 intron Cry + chr2L 11944546 intron Cry + chr2L_5_11940001 chr2L_11940001 RAL-382 422 chr2L 11952948 11953012 chr2L 11953077 11953141 18 126 7.0 7.5 7.2 2.2 193 chr2L 11952948 3` UTR CR43314 - chr2L 11953044 3` UTR CR43314 - chr2L 11953141 3` UTR CR43314 - chr2L_18_11950001 chr2L_11950001 RAL-382 423 chr2L 12026753 12026776 chr2L 12026984 12027007 10 231 3.0 0.0 1.5 4.0 254 chr2L 12026753 intergenic not near genes chr2L 12026880 intergenic not near genes chr2L 12027007 intergenic dmGlut + chr2L_10_12025001 chr2L_12025001 RAL-382 424 chr2L 12031342 12031418 chr2L 12031473 12031549 30 131 7.5 0.5 4.0 6.0 207 chr2L 12031342 intron dmGlut + chr2L 12031446 intron dmGlut + chr2L 12031549 intron dmGlut + chr2L_30_12030001 chr2L_12030001 RAL-382 425 chr2L 12067292 12067352 chr2L 12074393 12074438 297 35 7101 13.0 9.5 11.2 2.9 7146 chr2L 12067292 intergenic not near genes chr2L 12070865 intergenic not near genes chr2L 12074438 intergenic not near genes chr2L_35_12070001 chr2L_12070001 RAL-382 426 chr2L 12112029 12112045 chr2L 12112190 12112206 6 161 0.0 18.0 9.0 0.6 177 chr2L 12112029 3` UTR Phae2 + chr2L 12112118 3` UTR Phae2 + chr2L 12112206 3` UTR Phae2 + chr2L_6_12110001 chr2L_12110001 RAL-382 427 chr2L 12116811 12116883 chr2L 12116946 12117018 14 135 2.5 7.5 5.0 2.3 207 chr2L 12116811 intron CG17211 + chr2L 12116914 intron CG17211 + chr2L 12117018 intron CG17211 + chr2L_14_12115001 chr2L_12115001 RAL-382 428 chr2L 12123198 12123274 chr2L 12123333 12123409 25 135 5.0 10.5 7.8 2.8 211 chr2L 12123198 intron CG17211 + chr2L 12123304 intron CG17211 + chr2L 12123409 intron CG17211 + chr2L_25_12120001 chr2L_12120001 RAL-382 429 chr2L 12175771 12175835 chr2L 12175902 12175961 5 131 3.5 0.0 1.8 1.8 190 chr2L 12175771 intron,intron aret +,atilla - chr2L 12175866 intron,intron aret +,atilla - chr2L 12175961 intron,intron aret +,atilla - chr2L_5_12175001 chr2L_12175001 RAL-382 430 chr2L 12192311 12192367 chr2L 12192486 12192542 23 175 7.5 8.0 7.8 2.6 231 chr2L 12192311 intron aret + chr2L 12192426 intron aret + chr2L 12192542 intron aret + chr2L_23_12190001 chr2L_12190001 RAL-382 431 chr2L 12209995 12210045 chr2L 12210134 12210184 27 137 10.0 5.5 7.8 3.1 189 chr2L 12209995 intron,3` UTR aret +,CG31759 + chr2L 12210090 intron aret + chr2L 12210184 intron aret + chr2L_27_12210001 chr2L_12210001 RAL-382 432 chr2L 12233699 12233704 chr2L 12233826 12233832 5 128 19.0 11.0 15.0 0.3 133 chr2L 12233699 intron aret + chr2L 12233766 intron aret + chr2L 12233832 intron aret + chr2L_5_12230001 chr2L_12230001 RAL-382 433 chr2L 12233705 12233765 chr2L 12233825 12233872 24 125 5.5 11.0 8.2 2.6 167 chr2L 12233705 intron aret + chr2L 12233788 intron aret + chr2L 12233872 intron aret + chr2L_24_12230001 chr2L_12230001 RAL-382 434 chr2L 12233992 12234061 chr2L 12234137 12234205 26 144 7.5 11.0 9.2 2.5 213 chr2L 12233992 intron aret + chr2L 12234098 intron aret + chr2L 12234205 intron aret + chr2L_26_12230001 chr2L_12230001 RAL-382 435 chr2L 12269365 12269401 chr2L 12269493 12269529 16 127 10.5 7.0 8.8 1.6 164 chr2L 12269365 intron aret + chr2L 12269447 intron aret + chr2L 12269529 intron aret + chr2L_16_12265001 chr2L_12265001 RAL-382 436 chr2L 12275150 12275172 chr2L 12275287 12275309 11 137 7.0 7.0 7.0 1.4 159 chr2L 12275150 intron aret + chr2L 12275230 intron aret + chr2L 12275309 intron aret + chr2L_11_12275001 chr2L_12275001 RAL-382 437 chr2L 12287749 12287824 chr2L 12287879 12287950 32 127 8.5 7.5 8.0 3.6 201 chr2L 12287749 intron aret + chr2L 12287850 intron aret + chr2L 12287950 intron aret + chr2L_32_12285001 chr2L_12285001 RAL-382 438 chr2L 12323707 12323764 chr2L 12323858 12323915 22 150 7.0 7.5 7.2 2.7 208 chr2L 12323707 intergenic not near genes chr2L 12323811 intergenic not near genes chr2L 12323915 intergenic not near genes chr2L_22_12320001 chr2L_12320001 RAL-382 439 chr2L 12365731 12365757 chr2L 12365935 12365961 8 203 13.5 10.0 11.8 0.6 230 chr2L 12365731 intron bru-2 + chr2L 12365846 intron bru-2 + chr2L 12365961 intron bru-2 + chr2L_8_12365001 chr2L_12365001 RAL-382 440 chr2L 12365759 12365790 chr2L 12365925 12365994 12 199 8.5 8.0 8.2 1.3 235 chr2L 12365759 intron bru-2 + chr2L 12365876 intron bru-2 + chr2L 12365994 intron bru-2 + chr2L_12_12365001 chr2L_12365001 RAL-382 441 chr2L 12398652 12398672 chr2L 12398761 12398811 4 128 6.0 10.5 8.2 0.4 159 chr2L 12398652 exon Pkd2 + chr2L 12398732 exon Pkd2 + chr2L 12398811 exon Pkd2 + chr2L_4_12395001 chr2L_12395001 RAL-382 442 chr2L 12399358 12399405 chr2L 12399485 12399527 14 124 12.5 13.5 13.0 1.0 169 chr2L 12399358 exon Pkd2 + chr2L 12399442 exon Pkd2 + chr2L 12399527 exon Pkd2 + chr2L_14_12395001 chr2L_12395001 RAL-382 443 chr2L 12458244 12458299 chr2L 12458377 12458430 15 133 9.0 8.0 8.5 1.6 186 chr2L 12458244 intron bun - chr2L 12458337 intron bun - chr2L 12458430 intron bun - chr2L_15_12455001 chr2L_12455001 RAL-382 444 chr2L 12471085 12471140 chr2L 12471211 12471266 13 126 5.0 10.0 7.5 1.5 181 chr2L 12471085 intron bun - chr2L 12471176 intron bun - chr2L 12471266 intron bun - chr2L_13_12470001 chr2L_12470001 RAL-382 445 chr2L 12481345 12481403 chr2L 12481462 12481535 12 130 4.5 4.0 4.2 2.3 190 chr2L 12481345 intron bun - chr2L 12481440 intron bun - chr2L 12481535 intron bun - chr2L_12_12480001 chr2L_12480001 RAL-382 446 chr2L 12487845 12487863 chr2L 12487976 12487989 16 130 19.0 13.5 16.2 0.9 144 chr2L 12487845 intron bun - chr2L 12487917 intron bun - chr2L 12487989 intron bun - chr2L_16_12485001 chr2L_12485001 RAL-382 447 chr2L 12487864 12487913 chr2L 12487969 12488044 20 126 10.5 13.5 12.0 1.5 180 chr2L 12487864 intron bun - chr2L 12487954 intron bun - chr2L 12488044 intron bun - chr2L_20_12485001 chr2L_12485001 RAL-382 448 chr2L 12490036 12490110 chr2L 12490225 12490299 34 189 8.5 9.0 8.8 3.5 263 chr2L 12490036 intron bun - chr2L 12490168 intron bun - chr2L 12490299 intron bun - chr2L_34_12490001 chr2L_12490001 RAL-382 449 chr2L 12529198 12529385 chr2L 12529381 12529511 24 173 0.0 0.0 0.0 24.0 313 chr2L 12529198 intron bun - chr2L 12529354 intron bun - chr2L 12529511 intron bun - chr2L_24_12525001 chr2L_12525001 RAL-382 450 chr2L 12558271 12558347 chr2L 12565449 12565526 HMS-Beagle 37 7177 9.5 10.0 9.8 3.4 7255 chr2L 12558271 intergenic not near genes chr2L 12561898 intergenic not near genes chr2L 12565526 intergenic not near genes chr2L_37_12560001 chr2L_12560001 RAL-382 451 chr2L 12619852 12619904 chr2L 12619978 12620030 24 124 16.5 8.5 12.5 1.8 178 chr2L 12619852 intron,intron nub +,Ref2 - chr2L 12619941 intron,intron nub +,Ref2 - chr2L 12620030 intron,intron nub +,Ref2 - chr2L_24_12615001 chr2L_12615001 RAL-382 452 chr2L 12638730 12638805 chr2L 12638883 12638942 33 152 7.5 4.0 5.8 4.9 212 chr2L 12638730 intron Ref2 - chr2L 12638836 intron Ref2 - chr2L 12638942 intron Ref2 - chr2L_33_12635001 chr2L_12635001 RAL-382 453 chr2L 12731015 12731081 chr2L 12735832 12735898 F-element 27 4816 7.5 11.0 9.2 2.6 4883 chr2L 12731015 intron MRP + chr2L 12733456 intron MRP + chr2L 12735898 intron MRP + chr2L_27_12730001 chr2L_12730001 RAL-382 454 chr2L 12739136 12739195 chr2L 12743967 12744020 Doc 20 4829 7.0 13.0 10.0 1.8 4884 chr2L 12739136 exon MRP + chr2L 12741578 intron MRP + chr2L 12744020 exon MRP + chr2L_20_12740001 chr2L_12740001 RAL-382 455 chr2L 12763782 12763868 chr2L 12764044 12764115 BS 18 261 0.0 0.0 0.0 18.0 333 chr2L 12763782 intergenic not near genes chr2L 12763948 intergenic not near genes chr2L 12764115 intergenic not near genes chr2L_18_12760001 chr2L_12760001 RAL-382 456 chr2L 12766711 12766779 chr2L 12766839 12766906 21 128 10.0 5.0 7.5 2.5 195 chr2L 12766711 intergenic not near genes chr2L 12766808 intergenic not near genes chr2L 12766906 intergenic not near genes chr2L_21_12765001 chr2L_12765001 RAL-382 457 chr2L 12781759 12781814 chr2L 12789259 12789314 Quasimodo 22 7499 15.0 12.5 13.8 1.5 7555 chr2L 12781759 intergenic not near genes chr2L 12785536 intergenic not near genes chr2L 12789314 intergenic not near genes chr2L_22_12785001 chr2L_12785001 RAL-382 458 chr2L 12791569 12791622 chr2L 12795294 12795347 F-element 23 3724 7.0 18.0 12.5 1.7 3778 chr2L 12791569 intergenic not near genes chr2L 12793458 intergenic not near genes chr2L 12795347 intergenic not near genes chr2L_23_12790001 chr2L_12790001 RAL-382 459 chr2L 12848376 12848460 chr2L 12848518 12848598 34 138 6.0 12.5 9.2 3.3 222 chr2L 12848376 intergenic not near genes chr2L 12848487 intergenic not near genes chr2L 12848598 intergenic not near genes chr2L_34_12845001 chr2L_12845001 RAL-382 460 chr2L 12861652 12861724 chr2L 12863169 12863219 hobo 19 1509 6.0 4.0 5.0 3.2 1567 chr2L 12861652 intergenic not near genes chr2L 12862436 intergenic not near genes chr2L 12863219 intergenic not near genes chr2L_19_12860001 chr2L_12860001 RAL-382 461 chr2L 12893996 12894036 chr2L 12895508 12895508 hobo 7 1506 11.0 12.5 11.8 0.5 1512 chr2L 12893996 intergenic not near genes chr2L 12894752 intergenic not near genes chr2L 12895508 intergenic not near genes chr2L_7_12890001 chr2L_12890001 RAL-382 462 chr2L 12905427 12905491 chr2L 12905561 12905625 28 133 14.5 5.5 10.0 2.5 198 chr2L 12905427 intergenic not near genes chr2L 12905526 intergenic not near genes chr2L 12905625 intergenic not near genes chr2L_28_12905001 chr2L_12905001 RAL-382 463 chr2L 12933806 12933878 chr2L 12941322 12941380 blood 31 7514 11.5 6.5 9.0 3.1 7574 chr2L 12933806 intergenic not near genes chr2L 12937593 intergenic not near genes chr2L 12941380 intergenic not near genes chr2L_31_12935001 chr2L_12935001 RAL-382 464 chr2L 12945932 12946003 chr2L 12946062 12946093 34 127 10.0 16.0 13.0 2.4 161 chr2L 12945932 intergenic not near genes chr2L 12946012 intergenic not near genes chr2L 12946093 intergenic not near genes chr2L_34_12945001 chr2L_12945001 RAL-382 465 chr2L 12963746 12963817 chr2L 12963898 12963960 22 146 5.0 3.5 4.2 4.2 214 chr2L 12963746 intergenic not near genes chr2L 12963853 intergenic not near genes chr2L 12963960 intergenic not near genes chr2L_22_12960001 chr2L_12960001 RAL-382 466 chr2L 13215348 13215399 chr2L 13215664 13215724 23 323 10.5 14.0 12.2 1.7 376 chr2L 13215348 5` UTR kek4 - chr2L 13215536 intergenic kek4 -,snRNA:U2:34ABb +,snRNA:U2:34ABc + chr2L 13215724 intergenic snRNA:U2:34ABb +,snRNA:U2:34ABc +,kek4 - chr2L_23_13215001 chr2L_13215001 RAL-382 467 chr2L 13225273 13225343 chr2L 13225432 13225484 29 154 3.0 4.5 3.8 6.0 211 chr2L 13225273 5` UTR CG15480 - chr2L 13225378 intergenic CG15480 - chr2L 13225484 intergenic CG15480 - chr2L_29_13225001 chr2L_13225001 RAL-382 468 chr2L 13268469 13268509 chr2L 13268766 13268806 30 295 20.0 8.5 14.2 2.0 337 chr2L 13268469 intron CG44085 + chr2L 13268638 intron CG44085 + chr2L 13268806 intron CG44085 + chr2L_30_13265001 chr2L_13265001 RAL-382 469 chr2L 13268510 13268541 chr2L 13268765 13268801 18 292 9.5 8.0 8.8 1.8 291 chr2L 13268510 intron CG44085 + chr2L 13268656 intron CG44085 + chr2L 13268801 intron CG44085 + chr2L_18_13265001 chr2L_13265001 RAL-382 470 chr2L 13333038 13333098 chr2L 13333180 13333240 17 142 0.0 12.5 6.2 2.4 202 chr2L 13333038 intergenic not near genes chr2L 13333139 intergenic not near genes chr2L 13333240 intergenic not near genes chr2L_17_13330001 chr2L_13330001 RAL-382 471 chr2L 13398675 13398746 chr2L 13398805 13398876 26 130 8.5 10.0 9.2 2.5 201 chr2L 13398675 intergenic CG10859 -,CR44600 -,CG7110 + chr2L 13398776 intergenic CR44600 -,CG10859 -,CG7110 + chr2L 13398876 3` UTR CR44600 - chr2L_26_13395001 chr2L_13395001 RAL-382 472 chr2L 13405611 13405670 chr2L 13410454 13410517 Doc 20 4846 5.5 7.0 6.2 2.8 4906 chr2L 13405611 exon CG7110 + chr2L 13408064 intron CG7110 + chr2L 13410517 exon CG7110 + chr2L_20_13405001 chr2L_13405001 RAL-382 473 chr2L 13442807 13442868 chr2L 13442930 13442981 8 124 0.5 6.5 3.5 1.8 174 chr2L 13442807 intron CG42784 + chr2L 13442894 intron CG42784 + chr2L 13442981 intron CG42784 + chr2L_8_13440001 chr2L_13440001 RAL-382 474 chr2L 13449423 13449486 chr2L 13456909 13456972 Quasimodo 37 7486 10.0 12.0 11.0 3.1 7549 chr2L 13449423 intron,intron CG42784 +,Hsp60D - chr2L 13453198 intron CG42784 + chr2L 13456972 intron CG42784 + chr2L_37_13450001 chr2L_13450001 RAL-382 475 chr2L 13473556 13473621 chr2L 13473683 13473748 32 125 11.5 9.5 10.5 2.8 192 chr2L 13473556 intron CG42784 + chr2L 13473652 intron CG42784 + chr2L 13473748 intron CG42784 + chr2L_32_13470001 chr2L_13470001 RAL-382 476 chr2L 13481410 13481465 chr2L 13482067 13482122 jockey 25 656 16.5 9.0 12.8 1.8 712 chr2L 13481410 intron CG42784 + chr2L 13481766 intron CG42784 + chr2L 13482122 intron CG42784 + chr2L_25_13480001 chr2L_13480001 RAL-382 477 chr2L 13522242 13522290 chr2L 13527590 13527613 Transpac 15 5348 2.5 12.0 7.2 1.8 5371 chr2L 13522242 intron B4 - chr2L 13524928 intron B4 - chr2L 13527613 intron B4 - chr2L_15_13520001 chr2L_13520001 RAL-382 478 chr2L 13556579 13556607 chr2L 13556710 13556737 5 131 7.5 0.0 3.8 1.0 158 chr2L 13556579 intron kuz + chr2L 13556658 intron kuz + chr2L 13556737 intron kuz + chr2L_5_13555001 chr2L_13555001 RAL-382 479 chr2L 13560366 13560420 chr2L 13565235 13565289 F-element 20 4868 8.0 0.0 4.0 4.0 4923 chr2L 13560366 intron kuz + chr2L 13562828 intron kuz + chr2L 13565289 intron kuz + chr2L_20_13560001 chr2L_13560001 RAL-382 480 chr2L 13566952 13566982 chr2L 13567135 13567170 15 186 17.0 7.0 12.0 1.2 218 chr2L 13566952 intron kuz + chr2L 13567061 intron kuz + chr2L 13567170 intron kuz + chr2L_15_13565001 chr2L_13565001 RAL-382 481 chr2L 13566985 13567018 chr2L 13567128 13567206 9 178 6.0 5.5 5.8 1.3 221 chr2L 13566985 intron kuz + chr2L 13567096 intron kuz + chr2L 13567206 intron kuz + chr2L_9_13565001 chr2L_13565001 RAL-382 482 chr2L 13570179 13570252 chr2L 13570342 13570415 41 162 9.5 11.5 10.5 3.6 236 chr2L 13570179 intron kuz + chr2L 13570297 intron kuz + chr2L 13570415 intron kuz + chr2L_41_13570001 chr2L_13570001 RAL-382 483 chr2L 13600770 13600854 chr2L 13600969 13601003 32 197 5.0 12.5 8.8 3.3 233 chr2L 13600770 intron kuz + chr2L 13600886 intron kuz + chr2L 13601003 intron kuz + chr2L_32_13600001 chr2L_13600001 RAL-382 484 chr2L 13605007 13605077 chr2L 13605133 13605204 9 114 4.0 9.0 6.5 1.2 197 chr2L 13605007 intron kuz + chr2L 13605106 intron kuz + chr2L 13605204 intron kuz + chr2L_9_13605001 chr2L_13605001 RAL-382 485 chr2L 13713244 13713543 chr2L 13713448 13713669 40 172 10.5 8.5 9.5 3.8 425 chr2L 13713244 intron CG31814 - chr2L 13713456 intron CG31814 - chr2L 13713669 intron CG31814 - chr2L_40_13710001 chr2L_13710001 RAL-382 486 chr2L 13713546 13713572 chr2L 13713672 13713698 18 126 9.0 13.0 11.0 1.5 152 chr2L 13713546 intron CG31814 - chr2L 13713622 intron CG31814 - chr2L 13713698 intron CG31814 - chr2L_18_13710001 chr2L_13710001 RAL-382 487 chr2L 13720196 13720211 chr2L 13720334 13720349 10 138 9.0 0.0 4.5 1.8 153 chr2L 13720196 intergenic not near genes chr2L 13720272 intergenic not near genes chr2L 13720349 intergenic not near genes chr2L_10_13720001 chr2L_13720001 RAL-382 488 chr2L 13733722 13733780 chr2L 13733891 13733949 28 169 3.5 7.5 5.5 4.3 227 chr2L 13733722 intergenic not near genes chr2L 13733836 intergenic not near genes chr2L 13733949 intergenic not near genes chr2L_28_13730001 chr2L_13730001 RAL-382 489 chr2L 13747398 13747462 chr2L 13748277 13748321 5 875 28.5 22.5 25.5 0.2 923 chr2L 13747398 intron,intron CR44846 +,TM9SF4 + chr2L 13747860 intron,intron CR44846 +,TM9SF4 + chr2L 13748321 intron,intron CR44846 +,TM9SF4 + chr2L_5_13745001 chr2L_13745001 RAL-382 490 chr2L 13761770 13761798 chr2L 13762931 13762933 Doc 8 1157 15.0 7.0 11.0 0.7 1163 chr2L 13761770 intron TM9SF4 + chr2L 13762352 intron TM9SF4 + chr2L 13762933 intron TM9SF4 + chr2L_8_13760001 chr2L_13760001 RAL-382 491 chr2L 13761802 13761828 chr2L 13762927 13762989 Doc 5 1148 5.5 6.5 6.0 0.7 1187 chr2L 13761802 intron TM9SF4 + chr2L 13762396 intron TM9SF4 + chr2L 13762989 intron TM9SF4 + chr2L_5_13760001 chr2L_13760001 RAL-382 492 chr2L 13842082 13842153 chr2L 13842216 13842287 31 133 10.0 0.0 5.0 5.2 205 chr2L 13842082 intron CenG1A + chr2L 13842184 intron CenG1A + chr2L 13842287 intron CenG1A + chr2L_31_13840001 chr2L_13840001 RAL-382 493 chr2L 13853045 13853103 chr2L 13862245 13862303 roo 19 9198 9.0 9.0 9.0 1.9 9258 chr2L 13853045 intron CenG1A + chr2L 13857674 intron CenG1A + chr2L 13862303 intron CenG1A + chr2L_19_13855001 chr2L_13855001 RAL-382 494 chr2L 13882883 13882948 chr2L 13883018 13883082 29 134 9.5 13.0 11.2 2.4 199 chr2L 13882883 intron CenG1A + chr2L 13882982 intron CenG1A + chr2L 13883082 intron CenG1A + chr2L_29_13880001 chr2L_13880001 RAL-382 495 chr2L 13918771 13918838 chr2L 13918908 13918975 22 136 5.0 7.5 6.2 3.1 204 chr2L 13918771 intron Ance-3 + chr2L 13918873 intron Ance-3 + chr2L 13918975 intron Ance-3 + chr2L_22_13915001 chr2L_13915001 RAL-382 496 chr2L 14017722 14017791 chr2L 14017864 14017933 24 141 5.5 9.5 7.5 2.8 211 chr2L 14017722 intron bgm + chr2L 14017828 intron bgm + chr2L 14017933 intron bgm + chr2L_24_14015001 chr2L_14015001 RAL-382 497 chr2L 14112697 14112701 chr2L 14112838 14112842 5 141 29.0 12.5 20.8 0.2 145 chr2L 14112697 intergenic not near genes chr2L 14112770 intergenic not near genes chr2L 14112842 intergenic not near genes chr2L_5_14110001 chr2L_14110001 RAL-382 498 chr2L 14112702 14112732 chr2L 14112837 14112873 16 140 19.5 12.0 15.8 1.0 171 chr2L 14112702 intergenic not near genes chr2L 14112788 intergenic not near genes chr2L 14112873 intergenic not near genes chr2L_16_14110001 chr2L_14110001 RAL-382 499 chr2L 14112735 14112760 chr2L 14112832 14112901 12 137 13.5 11.0 12.2 0.9 166 chr2L 14112735 intergenic not near genes chr2L 14112818 intergenic not near genes chr2L 14112901 intergenic not near genes chr2L_12_14110001 chr2L_14110001 RAL-382 500 chr2L 14121737 14121804 chr2L 14121863 14121936 25 130 7.0 7.5 7.2 3.0 199 chr2L 14121737 intergenic not near genes chr2L 14121836 intergenic not near genes chr2L 14121936 intergenic not near genes chr2L_25_14120001 chr2L_14120001 RAL-382 501 chr2L 14151551 14151624 chr2L 14151679 14151752 26 127 9.0 9.0 9.0 2.6 201 chr2L 14151551 intron CG17341 + chr2L 14151652 intron CG17341 + chr2L 14151752 intron CG17341 + chr2L_26_14150001 chr2L_14150001 RAL-382 502 chr2L 14152569 14152603 chr2L 14152710 14152744 16 141 4.5 13.5 9.0 1.6 175 chr2L 14152569 intron CG17341 + chr2L 14152656 intron CG17341 + chr2L 14152744 intron CG17341 + chr2L_16_14150001 chr2L_14150001 RAL-382 503 chr2L 14160638 14160652 chr2L 14160774 14160788 8 136 14.0 9.0 11.5 0.6 150 chr2L 14160638 intergenic CG17341 + chr2L 14160713 intergenic CG17341 +,CG43332 - chr2L 14160788 intergenic CG17341 +,CG43332 - chr2L_8_14160001 chr2L_14160001 RAL-382 504 chr2L 14160653 14160712 chr2L 14160773 14160848 32 135 7.0 8.5 7.8 3.6 195 chr2L 14160653 intergenic CG17341 +,CG43332 - chr2L 14160750 intergenic CG17341 +,CG43332 - chr2L 14160848 intergenic CG17341 +,CG43332 - chr2L_32_14160001 chr2L_14160001 RAL-382 505 chr2L 14222257 14222332 chr2L 14222388 14222454 30 131 6.5 4.5 5.5 4.6 197 chr2L 14222257 intron Dyrk2 - chr2L 14222356 intron Dyrk2 - chr2L 14222454 intron Dyrk2 - chr2L_30_14220001 chr2L_14220001 RAL-382 506 chr2L 14236195 14236206 chr2L 14236342 14236353 7 146 30.0 0.0 15.0 0.4 158 chr2L 14236195 5` UTR CR44728 + chr2L 14236274 5` UTR CR44728 + chr2L 14236353 intergenic CR44728 + chr2L_7_14235001 chr2L_14235001 RAL-382 507 chr2L 14236212 14236268 chr2L 14236339 14236415 22 146 10.0 0.0 5.0 3.7 203 chr2L 14236212 5` UTR CR44728 + chr2L 14236314 intergenic CR44728 + chr2L 14236415 intergenic CR44728 + chr2L_22_14235001 chr2L_14235001 RAL-382 508 chr2L 14301715 14301729 chr2L 14301849 14301863 9 134 19.5 0.0 9.8 0.8 148 chr2L 14301715 intron wb + chr2L 14301789 intron wb + chr2L 14301863 intron wb + chr2L_9_14300001 chr2L_14300001 RAL-382 509 chr2L 14301745 14301776 chr2L 14301879 14301906 5 133 10.0 3.0 6.5 0.7 161 chr2L 14301745 intron wb + chr2L 14301826 intron wb + chr2L 14301906 intron wb + chr2L_5_14300001 chr2L_14300001 RAL-382 510 chr2L 14301777 14301791 chr2L 14301851 14301921 7 122 7.5 0.0 3.8 1.5 144 chr2L 14301777 intron wb + chr2L 14301849 intron wb + chr2L 14301921 intron wb + chr2L_7_14300001 chr2L_14300001 RAL-382 511 chr2L 14374729 14374802 chr2L 14374870 14374943 28 140 8.0 5.0 6.5 3.7 214 chr2L 14374729 intergenic not near genes chr2L 14374836 intergenic not near genes chr2L 14374943 intergenic not near genes chr2L_28_14370001 chr2L_14370001 RAL-382 512 chr2L 14428422 14428422 chr2L 22003994 22003994 7 7575572 36.0 26.5 31.2 0.2 7575572 chr2L 14428422 intergenic CR44732 - chr2L 18216208 intron CG42750 - chr2L 22003994 intergenic not near genes chr2L_7_18215001 chr2L_18215001 RAL-382 513 chr2L 14465360 14465425 chr2L 14465553 14465618 27 192 9.0 0.5 4.8 4.7 258 chr2L 14465360 intergenic not near genes chr2L 14465489 intergenic not near genes chr2L 14465618 intergenic not near genes chr2L_27_14465001 chr2L_14465001 RAL-382 514 chr2L 14465551 14465616 chr2L 14469064 14469129 hopper2 17 3513 1.5 10.0 5.8 2.5 3578 chr2L 14465551 intergenic not near genes chr2L 14467340 intergenic not near genes chr2L 14469129 intergenic not near genes chr2L_17_14465001 chr2L_14465001 RAL-382 515 chr2L 14471996 14472060 chr2L 14472122 14472186 29 125 6.5 6.0 6.2 4.0 190 chr2L 14471996 intergenic not near genes chr2L 14472091 intergenic not near genes chr2L 14472186 intergenic not near genes chr2L_29_14470001 chr2L_14470001 RAL-382 516 chr2L 14494659 14494707 chr2L 14494805 14494853 23 146 10.0 12.0 11.0 1.9 194 chr2L 14494659 intergenic not near genes chr2L 14494756 intergenic not near genes chr2L 14494853 intergenic not near genes chr2L_23_14490001 chr2L_14490001 RAL-382 517 chr2L 14570670 14570721 chr2L 14570801 14570851 10 130 9.0 6.0 7.5 1.2 181 chr2L 14570670 intergenic not near genes chr2L 14570760 intergenic not near genes chr2L 14570851 intergenic not near genes chr2L_10_14570001 chr2L_14570001 RAL-382 518 chr2L 14586163 14586177 chr2L 14586293 14586307 8 129 14.5 12.0 13.2 0.6 144 chr2L 14586163 intergenic not near genes chr2L 14586235 intergenic not near genes chr2L 14586307 intergenic not near genes chr2L_8_14585001 chr2L_14585001 RAL-382 519 chr2L 14586182 14586225 chr2L 14586289 14586355 15 119 6.0 10.0 8.0 1.7 173 chr2L 14586182 intergenic not near genes chr2L 14586268 intergenic not near genes chr2L 14586355 intergenic not near genes chr2L_15_14585001 chr2L_14585001 RAL-382 520 chr2L 14588344 14588412 chr2L 14588548 14588566 19 197 1.0 9.5 5.2 3.1 222 chr2L 14588344 intergenic CG42680 - chr2L 14588455 intergenic CG42680 - chr2L 14588566 intergenic CG42680 - chr2L_19_14585001 chr2L_14585001 RAL-382 521 chr2L 14588639 14588672 chr2L 14588980 14589013 15 341 4.5 11.0 7.8 1.7 374 chr2L 14588639 intergenic CG42680 - chr2L 14588826 intergenic not near genes chr2L 14589013 intergenic not near genes chr2L_15_14585001 chr2L_14585001 RAL-382 522 chr2L 14593046 14593088 chr2L 14593173 14593215 13 127 8.0 6.5 7.2 1.6 169 chr2L 14593046 intergenic not near genes chr2L 14593130 intergenic not near genes chr2L 14593215 intergenic not near genes chr2L_13_14590001 chr2L_14590001 RAL-382 523 chr2L 14618873 14618887 chr2L 14619304 14619318 jockey 7 431 9.5 12.5 11.0 0.6 445 chr2L 14618873 intron,3` UTR,3` UTR osp -,Adh +,Adhr + chr2L 14619096 intron osp - chr2L 14619318 intron osp - chr2L_7_14615001 chr2L_14615001 RAL-382 524 chr2L 14658645 14658710 chr2L 14658776 14658841 33 131 4.5 10.0 7.2 4.0 196 chr2L 14658645 intron osp - chr2L 14658743 intron osp - chr2L 14658841 intron osp - chr2L_33_14655001 chr2L_14655001 RAL-382 525 chr2L 14661154 14661193 chr2L 14661283 14661322 9 129 0.0 10.5 5.2 1.5 168 chr2L 14661154 intron osp - chr2L 14661238 intron osp - chr2L 14661322 intron osp - chr2L_9_14660001 chr2L_14660001 RAL-382 526 chr2L 14663814 14663885 chr2L 14663959 14663968 26 142 7.0 7.5 7.2 3.2 154 chr2L 14663814 intron osp - chr2L 14663891 intron osp - chr2L 14663968 intron osp - chr2L_26_14660001 chr2L_14660001 RAL-382 527 chr2L 14694210 14694281 chr2L 14694384 14694439 31 173 7.0 8.5 7.8 3.5 229 chr2L 14694210 intergenic not near genes chr2L 14694324 intergenic not near genes chr2L 14694439 intergenic not near genes chr2L_31_14690001 chr2L_14690001 RAL-382 528 chr2L 14726532 14726567 chr2L 14726664 14726699 16 132 8.5 17.5 13.0 1.1 167 chr2L 14726532 intron CG42685 - chr2L 14726616 intron CG42685 - chr2L 14726699 intron CG42685 - chr2L_16_14725001 chr2L_14725001 RAL-382 529 chr2L 14761861 14761917 chr2L 14762010 14762066 23 148 5.0 6.0 5.5 3.5 205 chr2L 14761861 3` UTR CG4691 + chr2L 14761964 intergenic CR44858 +,CG4691 + chr2L 14762066 5` UTR CR44858 + chr2L_23_14760001 chr2L_14760001 RAL-382 530 chr2L 14768881 14768955 chr2L 14769009 14769083 25 128 0.0 4.5 2.2 7.8 202 chr2L 14768881 intergenic not near genes chr2L 14768982 intergenic not near genes chr2L 14769083 intergenic not near genes chr2L_25_14765001 chr2L_14765001 RAL-382 531 chr2L 14803834 14803895 chr2L 14809087 14809148 copia 24 5252 8.0 11.5 9.8 2.2 5314 chr2L 14803834 intergenic not near genes chr2L 14806491 intergenic not near genes chr2L 14809148 intergenic not near genes chr2L_24_14805001 chr2L_14805001 RAL-382 532 chr2L 14840930 14841007 chr2L 14841068 14841144 19 137 3.5 5.5 4.5 3.5 214 chr2L 14840930 3` UTR CR43805 - chr2L 14841037 3` UTR CR43805 - chr2L 14841144 3` UTR CR43805 - chr2L_19_14840001 chr2L_14840001 RAL-382 533 chr2L 14849453 14849467 chr2L 14849658 14849674 8 208 0.0 23.5 11.8 0.6 221 chr2L 14849453 intron CG15279 - chr2L 14849564 intron CG15279 - chr2L 14849674 intron CG15279 - chr2L_8_14845001 chr2L_14845001 RAL-382 534 chr2L 14889905 14889984 chr2L 14890380 14890422 jockey 27 471 2.5 6.5 4.5 4.9 517 chr2L 14889905 intergenic not near genes chr2L 14890164 intergenic not near genes chr2L 14890422 intergenic not near genes chr2L_27_14890001 chr2L_14890001 RAL-382 535 chr2L 14933328 14933385 chr2L 14933456 14933513 24 127 8.5 7.0 7.8 2.7 185 chr2L 14933328 intron CG42313 - chr2L 14933420 intron CG42313 - chr2L 14933513 intron CG42313 - chr2L_24_14930001 chr2L_14930001 RAL-382 536 chr2L 14984339 14984378 chr2L 14991991 14992030 opus 15 7648 10.0 7.5 8.8 1.5 7691 chr2L 14984339 intron mol - chr2L 14988184 intron mol - chr2L 14992030 intron mol - chr2L_15_14985001 chr2L_14985001 RAL-382 537 chr2L 14984379 14984405 chr2L 14991985 14992025 opus 14 7643 7.5 7.0 7.2 1.7 7646 chr2L 14984379 intron mol - chr2L 14988202 intron mol - chr2L 14992025 intron mol - chr2L_14_14985001 chr2L_14985001 RAL-382 538 chr2L 15003498 15003569 chr2L 15003631 15003703 33 132 10.5 10.0 10.2 2.9 205 chr2L 15003498 intergenic not near genes chr2L 15003600 intergenic not near genes chr2L 15003703 intergenic not near genes chr2L_33_15000001 chr2L_15000001 RAL-382 539 chr2L 15013113 15013174 chr2L 15013257 15013333 26 153 8.0 6.5 7.2 3.2 220 chr2L 15013113 intergenic CR43856 - chr2L 15013223 intergenic not near genes chr2L 15013333 intergenic not near genes chr2L_26_15010001 chr2L_15010001 RAL-382 540 chr2L 15014574 15014651 chr2L 15014703 15014780 37 129 3.5 9.5 6.5 4.9 206 chr2L 15014574 intergenic not near genes chr2L 15014677 intergenic not near genes chr2L 15014780 intergenic not near genes chr2L_37_15010001 chr2L_15010001 RAL-382 541 chr2L 15022339 15022378 chr2L 15022464 15022504 14 124 10.5 11.0 10.8 1.2 165 chr2L 15022339 intron GABA-B-R1 + chr2L 15022422 intron GABA-B-R1 + chr2L 15022504 intron GABA-B-R1 + chr2L_14_15020001 chr2L_15020001 RAL-382 542 chr2L 15038893 15038927 chr2L 15039019 15039053 4 126 12.5 0.0 6.2 0.6 160 chr2L 15038893 intergenic CIAPIN1 - chr2L 15038973 intergenic CIAPIN1 - chr2L 15039053 intergenic CIAPIN1 -,Su(H) + chr2L_4_15035001 chr2L_15035001 RAL-382 543 chr2L 15122729 15122804 chr2L 15122859 15122935 20 130 3.0 3.0 3.0 5.0 206 chr2L 15122729 intergenic not near genes chr2L 15122832 intergenic not near genes chr2L 15122935 intergenic not near genes chr2L_20_15120001 chr2L_15120001 RAL-382 544 chr2L 15161200 15161274 chr2L 15161386 15161435 31 184 6.0 5.0 5.5 4.8 235 chr2L 15161200 intergenic CR44770 + chr2L 15161318 intergenic CR44770 + chr2L 15161435 intergenic CR44770 +,CG4168 - chr2L_31_15160001 chr2L_15160001 RAL-382 545 chr2L 15226326 15226360 chr2L 15226452 15226486 11 126 12.5 6.5 9.5 1.0 160 chr2L 15226326 intergenic not near genes chr2L 15226406 intergenic not near genes chr2L 15226486 intergenic not near genes chr2L_11_15225001 chr2L_15225001 RAL-382 546 chr2L 15226361 15226396 chr2L 15226450 15226522 19 115 9.0 6.5 7.8 2.2 161 chr2L 15226361 intergenic not near genes chr2L 15226442 intergenic not near genes chr2L 15226522 intergenic not near genes chr2L_19_15225001 chr2L_15225001 RAL-382 547 chr2L 15249732 15249739 chr2L 15249865 15249872 INE-1 4 133 19.5 16.0 17.8 0.2 140 chr2L 15249732 intron dao + chr2L 15249802 intron dao + chr2L 15249872 intron dao + chr2L_4_15245001 chr2L_15245001 RAL-382 548 chr2L 15287365 15287390 chr2L 15287497 15287524 4 134 19.5 2.0 10.8 0.3 159 chr2L 15287365 intergenic not near genes chr2L 15287444 intergenic not near genes chr2L 15287524 intergenic not near genes chr2L_4_15285001 chr2L_15285001 RAL-382 549 chr2L 15296665 15296734 chr2L 15296814 15296883 7 139 2.0 0.0 1.0 3.5 218 chr2L 15296665 3` UTR CR43764 - chr2L 15296774 3` UTR CR43764 - chr2L 15296883 3` UTR CR43764 - chr2L_7_15295001 chr2L_15295001 RAL-382 550 chr2L 15309310 15309319 chr2L 15309463 15309472 6 153 18.0 6.0 12.0 0.5 162 chr2L 15309310 intergenic not near genes chr2L 15309391 intergenic not near genes chr2L 15309472 intergenic not near genes chr2L_6_15305001 chr2L_15305001 RAL-382 551 chr2L 15309323 15309380 chr2L 15309461 15309533 21 151 4.5 6.0 5.2 3.4 210 chr2L 15309323 intergenic not near genes chr2L 15309428 intergenic not near genes chr2L 15309533 intergenic not near genes chr2L_21_15305001 chr2L_15305001 RAL-382 552 chr2L 15375766 15375845 chr2L 15375928 15376007 40 162 8.5 7.5 8.0 4.4 241 chr2L 15375766 intergenic not near genes chr2L 15375886 intergenic not near genes chr2L 15376007 intergenic not near genes chr2L_40_15375001 chr2L_15375001 RAL-382 553 chr2L 15399742 15399774 chr2L 15399871 15399903 9 125 11.5 9.5 10.5 0.8 161 chr2L 15399742 3` UTR CR44860 - chr2L 15399822 3` UTR CR44860 - chr2L 15399903 intergenic CR44860 -,CR45374 - chr2L_9_15395001 chr2L_15395001 RAL-382 554 chr2L 15446007 15446031 chr2L 15453526 15453550 blood 10 7519 18.5 10.5 14.5 0.6 7543 chr2L 15446007 intergenic not near genes chr2L 15449778 intergenic not near genes chr2L 15453550 intergenic not near genes chr2L_10_15445001 chr2L_15445001 RAL-382 555 chr2L 15446032 15446067 chr2L 15453525 15453586 blood 19 7517 13.0 10.5 11.8 1.5 7554 chr2L 15446032 intergenic not near genes chr2L 15449809 intergenic not near genes chr2L 15453586 intergenic not near genes chr2L_19_15445001 chr2L_15445001 RAL-382 556 chr2L 15488519 15488593 chr2L 15488648 15488662 32 127 17.0 9.5 13.2 2.3 143 chr2L 15488519 intergenic not near genes chr2L 15488590 intergenic not near genes chr2L 15488662 intergenic not near genes chr2L_32_15485001 chr2L_15485001 RAL-382 557 chr2L 15500015 15500062 chr2L 15500144 15500191 22 129 1.0 5.5 3.2 5.2 176 chr2L 15500015 intron lace + chr2L 15500103 intron lace + chr2L 15500191 intron lace + chr2L_22_15500001 chr2L_15500001 RAL-382 558 chr2L 15500779 15500786 chr2L 15500906 15500913 5 127 17.5 10.5 14.0 0.3 134 chr2L 15500779 intron lace + chr2L 15500846 intron lace + chr2L 15500913 intron lace + chr2L_5_15500001 chr2L_15500001 RAL-382 559 chr2L 15500788 15500851 chr2L 15500905 15500978 31 126 12.5 11.0 11.8 2.4 190 chr2L 15500788 intron lace + chr2L 15500883 intron lace + chr2L 15500978 intron lace + chr2L_31_15500001 chr2L_15500001 RAL-382 560 chr2L 15514275 15514325 chr2L 15514409 15514459 19 134 16.0 15.0 15.5 1.2 184 chr2L 15514275 intergenic not near genes chr2L 15514367 intergenic not near genes chr2L 15514459 intergenic not near genes chr2L_19_15510001 chr2L_15510001 RAL-382 561 chr2L 15535838 15535913 chr2L 15535978 15536053 41 138 10.0 8.5 9.2 4.0 215 chr2L 15535838 intergenic not near genes chr2L 15535946 intergenic not near genes chr2L 15536053 intergenic not near genes chr2L_41_15535001 chr2L_15535001 RAL-382 562 chr2L 15542392 15542465 chr2L 15542529 15542590 20 138 5.5 2.5 4.0 4.0 198 chr2L 15542392 intergenic not near genes chr2L 15542491 intergenic not near genes chr2L 15542590 intergenic not near genes chr2L_20_15540001 chr2L_15540001 RAL-382 563 chr2L 15543137 15543191 chr2L 15543268 15543322 26 131 12.0 9.5 10.8 2.2 185 chr2L 15543137 intergenic not near genes chr2L 15543230 intergenic not near genes chr2L 15543322 intergenic not near genes chr2L_26_15540001 chr2L_15540001 RAL-382 564 chr2L 15586369 15586427 chr2L 15593471 15593529 297 24 7101 10.0 9.5 9.8 2.2 7160 chr2L 15586369 intergenic not near genes chr2L 15589949 intergenic not near genes chr2L 15593529 intergenic not near genes chr2L_24_15585001 chr2L_15585001 RAL-382 565 chr2L 15598744 15598800 chr2L 15598873 15598929 16 129 10.0 0.0 5.0 2.7 185 chr2L 15598744 intergenic not near genes chr2L 15598836 intergenic not near genes chr2L 15598929 intergenic not near genes chr2L_16_15595001 chr2L_15595001 RAL-382 566 chr2L 15636628 15636694 chr2L 15636754 15636821 25 127 8.0 5.0 6.5 3.3 193 chr2L 15636628 intergenic not near genes chr2L 15636724 intergenic not near genes chr2L 15636821 intergenic not near genes chr2L_25_15635001 chr2L_15635001 RAL-382 567 chr2L 15730838 15730891 chr2L 15730973 15731026 13 135 4.5 6.0 5.2 2.1 188 chr2L 15730838 intron CycE - chr2L 15730932 intron CycE - chr2L 15731026 intron CycE - chr2L_13_15730001 chr2L_15730001 RAL-382 568 chr2L 15749976 15750267 chr2L 15750139 15750401 11 158 0.0 0.0 0.0 11.0 425 chr2L 15749976 intron l(2)35Di - chr2L 15750188 intron l(2)35Di - chr2L 15750401 intron l(2)35Di - chr2L_11_15750001 chr2L_15750001 RAL-382 569 chr2L 15821009 15821067 chr2L 15821153 15821217 12 144 0.0 0.5 0.2 10.0 208 chr2L 15821009 intergenic not near genes chr2L 15821113 intergenic not near genes chr2L 15821217 intergenic not near genes chr2L_12_15820001 chr2L_15820001 RAL-382 570 chr2L 15823306 15823371 chr2L 15823432 15823497 20 125 5.5 4.0 4.8 3.4 191 chr2L 15823306 intergenic CR44601 - chr2L 15823402 intergenic CR44601 - chr2L 15823497 intergenic not near genes chr2L_20_15820001 chr2L_15820001 RAL-382 571 chr2L 15826844 15826888 chr2L 15829288 15829332 Tabor 21 2443 11.0 9.0 10.0 1.9 2488 chr2L 15826844 intergenic not near genes chr2L 15828088 intergenic not near genes chr2L 15829332 intergenic not near genes chr2L_21_15825001 chr2L_15825001 RAL-382 572 chr2L 15947596 15947662 chr2L 15947798 15947864 18 200 8.5 6.5 7.5 2.1 268 chr2L 15947596 intron beat-Ib - chr2L 15947730 intron beat-Ib - chr2L 15947864 intron beat-Ib - chr2L_18_15945001 chr2L_15945001 RAL-382 573 chr2L 15954134 15954203 chr2L 15954263 15954334 19 129 9.5 10.0 9.8 1.8 200 chr2L 15954134 intron beat-Ib - chr2L 15954234 intron beat-Ib - chr2L 15954334 intron beat-Ib - chr2L_19_15950001 chr2L_15950001 RAL-382 574 chr2L 15955984 15955997 chr2L 15957501 15957514 hobo 9 1516 16.5 10.5 13.5 0.6 1530 chr2L 15955984 intron beat-Ib - chr2L 15956749 intron beat-Ib - chr2L 15957514 intron beat-Ib - chr2L_9_15955001 chr2L_15955001 RAL-382 575 chr2L 15955998 15956010 chr2L 15957499 15957527 hobo 8 1515 13.5 9.5 11.5 0.6 1529 chr2L 15955998 intron beat-Ib - chr2L 15956762 intron beat-Ib - chr2L 15957527 intron beat-Ib - chr2L_8_15955001 chr2L_15955001 RAL-382 576 chr2L 15956016 15956049 chr2L 15957493 15957566 hobo 19 1514 7.5 9.0 8.2 2.1 1550 chr2L 15956016 intron beat-Ib - chr2L 15956791 intron beat-Ib - chr2L 15957566 intron beat-Ib - chr2L_19_15955001 chr2L_15955001 RAL-382 577 chr2L 15976386 15976388 chr2L 15976522 15976524 4 136 3.5 7.0 5.2 0.6 138 chr2L 15976386 intergenic not near genes chr2L 15976455 intergenic not near genes chr2L 15976524 intergenic not near genes chr2L_4_15975001 chr2L_15975001 RAL-382 578 chr2L 16008652 16008689 chr2L 16008803 16008840 15 151 4.5 5.0 4.8 2.6 188 chr2L 16008652 intron beat-Ic + chr2L 16008746 intron beat-Ic + chr2L 16008840 intron beat-Ic + chr2L_15_16005001 chr2L_16005001 RAL-382 579 chr2L 16016387 16016429 chr2L 16016514 16016554 9 126 12.0 7.0 9.5 0.9 167 chr2L 16016387 intron beat-Ic + chr2L 16016470 intron beat-Ic + chr2L 16016554 intron beat-Ic + chr2L_9_16015001 chr2L_16015001 RAL-382 580 chr2L 16016435 16016455 chr2L 16016510 16016563 9 101 7.0 7.5 7.2 1.1 128 chr2L 16016435 intron beat-Ic + chr2L 16016499 intron beat-Ic + chr2L 16016563 intron beat-Ic + chr2L_9_16015001 chr2L_16015001 RAL-382 581 chr2L 16056121 16056154 chr2L 16056247 16056280 10 126 3.0 9.5 6.2 1.4 159 chr2L 16056121 intron beat-Ia + chr2L 16056200 intron beat-Ia + chr2L 16056280 exon beat-Ia + chr2L_10_16055001 chr2L_16055001 RAL-382 582 chr2L 16058078 16058145 chr2L 16058269 16058336 31 191 7.0 7.5 7.2 3.8 258 chr2L 16058078 intron beat-Ia + chr2L 16058207 intron beat-Ia + chr2L 16058336 intron beat-Ia + chr2L_31_16055001 chr2L_16055001 RAL-382 583 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 44 145889 25.5 31.0 28.2 1.5 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_44_16140001 chr2L_16140001 RAL-382 584 chr2L 16115488 16115537 chr2L 16115603 16115663 15 124 10.0 10.5 10.2 1.3 175 chr2L 16115488 intergenic not near genes chr2L 16115576 intergenic not near genes chr2L 16115663 intergenic not near genes chr2L_15_16115001 chr2L_16115001 RAL-382 585 chr2L 16141126 16141183 chr2L 16146383 16146440 copia 26 5255 9.5 9.5 9.5 2.5 5314 chr2L 16141126 intergenic not near genes chr2L 16143783 intergenic not near genes chr2L 16146440 intergenic not near genes chr2L_26_16140001 chr2L_16140001 RAL-382 586 chr2L 16151639 16151649 chr2L 16151770 16151780 5 130 9.5 10.0 9.8 0.5 141 chr2L 16151639 intergenic not near genes chr2L 16151710 intergenic not near genes chr2L 16151780 intergenic not near genes chr2L_5_16150001 chr2L_16150001 RAL-382 587 chr2L 16153693 16153749 chr2L 16160811 16160867 297 27 7117 9.5 5.5 7.5 3.2 7174 chr2L 16153693 intergenic not near genes chr2L 16157280 intergenic not near genes chr2L 16160867 intergenic not near genes chr2L_27_16155001 chr2L_16155001 RAL-382 588 chr2L 9084336 9084340 chr2L 16217660 16217660 13 7133322 24.0 31.0 27.5 0.5 7133324 chr2L 9084336 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_13_12650001 chr2L_12650001 RAL-382 589 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 46 145889 25.5 31.0 28.2 1.6 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_46_16140001 chr2L_16140001 RAL-382 590 chr2L 16217660 16217660 chr2L 18622718 18622719 19 2405058 34.5 13.5 24.0 0.8 2405059 chr2L 16217660 intergenic not near genes chr2L 17420190 intron Dif - chr2L 18622719 intron MESR3 + chr2L_19_17420001 chr2L_17420001 RAL-382 591 chr2L 16280239 16280284 chr2L 16281437 16281483 1360 17 1208 10.0 8.0 9.0 1.7 1244 chr2L 16280239 intron crp - chr2L 16280861 intron crp - chr2L 16281483 intron crp - chr2L_17_16280001 chr2L_16280001 RAL-382 592 chr2L 16317440 16317491 chr2L 16317570 16317621 26 127 9.0 18.0 13.5 1.8 181 chr2L 16317440 intron cact - chr2L 16317530 intron cact - chr2L 16317621 intron cact - chr2L_26_16315001 chr2L_16315001 RAL-382 593 chr2L 16354727 16354775 chr2L 16354868 16354917 15 140 11.0 5.5 8.2 1.6 190 chr2L 16354727 intergenic CaBP1 -,CG4455 + chr2L 16354822 intergenic CaBP1 -,CG4455 + chr2L 16354917 3` UTR CaBP1 - chr2L_15_16350001 chr2L_16350001 RAL-382 594 chr2L 16363912 16363975 chr2L 16364208 16364264 27 295 0.0 11.0 5.5 4.2 352 chr2L 16363912 intergenic not near genes chr2L 16364088 intergenic not near genes chr2L 16364264 intergenic not near genes chr2L_27_16360001 chr2L_16360001 RAL-382 595 chr2L 16365426 16365498 chr2L 16365626 16365668 24 199 0.5 8.0 4.2 4.6 242 chr2L 16365426 intergenic jhamt + chr2L 16365547 intergenic jhamt + chr2L 16365668 intergenic jhamt + chr2L_24_16365001 chr2L_16365001 RAL-382 596 chr2L 16408101 16408154 chr2L 16408230 16408271 6 146 0.0 5.5 2.8 1.6 170 chr2L 16408101 intron CG5888 - chr2L 16408186 intron CG5888 - chr2L 16408271 intron CG5888 - chr2L_6_16405001 chr2L_16405001 RAL-382 597 chr2L 16458779 16458853 chr2L 16459025 16459100 5 246 0.0 6.0 3.0 1.2 321 chr2L 16458779 intergenic not near genes chr2L 16458940 intergenic not near genes chr2L 16459100 intergenic not near genes chr2L_5_16455001 chr2L_16455001 RAL-382 598 chr2L 16504951 16505015 chr2L 16505113 16505175 22 160 0.0 12.5 6.2 3.1 224 chr2L 16504951 intron Tpr2 + chr2L 16505063 intron Tpr2 + chr2L 16505175 intron Tpr2 + chr2L_22_16505001 chr2L_16505001 RAL-382 599 chr2L 16507890 16507965 chr2L 16508023 16508103 13 135 0.0 6.5 3.2 3.1 213 chr2L 16507890 intergenic CG5953 -,Tpr2 + chr2L 16507996 intergenic CG5953 -,Tpr2 + chr2L 16508103 3` UTR CG5953 - chr2L_13_16505001 chr2L_16505001 RAL-382 600 chr2L 16511935 16511990 chr2L 16519112 16519167 HMS-Beagle 26 7176 7.5 8.0 7.8 3.0 7232 chr2L 16511935 intron CG5953 - chr2L 16515551 intron CG5953 - chr2L 16519167 intron CG5953 - chr2L_26_16515001 chr2L_16515001 RAL-382 601 chr2L 16551833 16551851 chr2L 16551970 16551988 10 137 16.0 7.5 11.8 0.8 155 chr2L 16551833 intron CG42389 + chr2L 16551910 intron CG42389 + chr2L 16551988 intron CG42389 + chr2L_10_16550001 chr2L_16550001 RAL-382 602 chr2L 16551854 16551905 chr2L 16551964 16552042 22 135 5.0 6.5 5.8 3.2 188 chr2L 16551854 intron CG42389 + chr2L 16551948 intron CG42389 + chr2L 16552042 intron CG42389 + chr2L_22_16550001 chr2L_16550001 RAL-382 603 chr2L 16585748 16585761 chr2L 16585887 16585900 5 139 17.0 10.0 13.5 0.3 152 chr2L 16585748 intron CG42389 + chr2L 16585824 intron CG42389 + chr2L 16585900 intron CG42389 + chr2L_5_16585001 chr2L_16585001 RAL-382 604 chr2L 16585764 16585811 chr2L 16585874 16585900 21 131 9.0 7.0 8.0 2.3 136 chr2L 16585764 intron CG42389 + chr2L 16585832 intron CG42389 + chr2L 16585900 intron CG42389 + chr2L_21_16585001 chr2L_16585001 RAL-382 605 chr2L 16629276 16629352 chr2L 16629411 16629496 14 143 7.0 0.0 3.5 3.1 220 chr2L 16629276 intron CG42389 + chr2L 16629386 intron CG42389 + chr2L 16629496 intron CG42389 + chr2L_14_16625001 chr2L_16625001 RAL-382 606 chr2L 16646486 16646544 chr2L 16646650 16646710 14 164 9.0 7.0 8.0 1.6 224 chr2L 16646486 intron CG42389 + chr2L 16646598 intron CG42389 + chr2L 16646710 intron CG42389 + chr2L_14_16645001 chr2L_16645001 RAL-382 607 chr2L 16659617 16659634 chr2L 16666765 16666782 5 7148 32.5 58.0 45.2 0.1 7165 chr2L 16659617 exon CG42389 + chr2L 16663200 intergenic Trpgamma - chr2L 16666782 exon Trpgamma - chr2L_5_16660001 chr2L_16660001 RAL-382 608 chr2L 16659615 16659666 chr2L 16666784 16666838 17 7157 34.5 55.5 45.0 0.4 7223 chr2L 16659615 exon CG42389 + chr2L 16663226 intergenic Trpgamma - chr2L 16666838 exon Trpgamma - chr2L_17_16660001 chr2L_16660001 RAL-382 609 chr2L 16670382 16670446 chr2L 16670509 16670573 30 126 8.0 6.0 7.0 3.8 191 chr2L 16670382 intron Trpgamma - chr2L 16670478 intron Trpgamma - chr2L 16670573 intron Trpgamma - chr2L_30_16670001 chr2L_16670001 RAL-382 610 chr2L 16809624 16809638 chr2L 16809802 16809806 7 177 0.0 0.0 0.0 7.0 182 chr2L 16809624 intron,intron CG13280 -,CG13272 + chr2L 16809715 intron,intron CG13280 -,CG13272 + chr2L 16809806 intron,intron CG13280 -,CG13272 + chr2L_7_16805001 chr2L_16805001 RAL-382 611 chr2L 16852732 16852804 chr2L 16859923 16859971 Doc4-element 20 7190 40.0 12.0 26.0 0.7 7239 chr2L 16852732 intergenic CG31810 - chr2L 16856352 intron CG31809 - chr2L 16859971 intergenic CG6012 - chr2L_20_16855001 chr2L_16855001 RAL-382 612 chr2L 16880813 16880845 chr2L 16880945 16880977 8 132 10.0 7.0 8.5 0.8 164 chr2L 16880813 intron,intron CG31743 +,CG34313 + chr2L 16880895 intron,intron CG31743 +,CG34313 + chr2L 16880977 intron,intron CG31743 +,CG34313 + chr2L_8_16880001 chr2L_16880001 RAL-382 613 chr2L 16945504 16945573 chr2L 16945659 16945720 30 158 6.5 6.0 6.2 4.2 216 chr2L 16945504 intergenic CR43053 - chr2L 16945612 intergenic CR43053 - chr2L 16945720 intergenic CR43053 - chr2L_30_16945001 chr2L_16945001 RAL-382 614 chr2L 16958060 16958124 chr2L 16962898 16962962 Doc 39 4837 8.5 9.0 8.8 4.0 4902 chr2L 16958060 intergenic not near genes chr2L 16960511 intergenic not near genes chr2L 16962962 intergenic not near genes chr2L_39_16960001 chr2L_16960001 RAL-382 615 chr2L 16968190 16968257 chr2L 16968330 16968397 30 140 4.0 9.0 6.5 4.0 207 chr2L 16968190 intergenic not near genes chr2L 16968294 intergenic not near genes chr2L 16968397 intergenic not near genes chr2L_30_16965001 chr2L_16965001 RAL-382 616 chr2L 16987387 16987408 chr2L 16987517 16987538 8 130 16.0 16.0 16.0 0.5 151 chr2L 16987387 intron beat-IIIb + chr2L 16987462 intron beat-IIIb + chr2L 16987538 intron beat-IIIb + chr2L_8_16985001 chr2L_16985001 RAL-382 617 chr2L 16987416 16987443 chr2L 16987509 16987573 10 125 9.5 15.5 12.5 0.7 157 chr2L 16987416 intron beat-IIIb + chr2L 16987494 intron beat-IIIb + chr2L 16987573 intron beat-IIIb + chr2L_10_16985001 chr2L_16985001 RAL-382 618 chr2L 16998949 16999011 chr2L 16999076 16999140 7 128 0.0 0.0 0.0 7.0 191 chr2L 16998949 intergenic CR45357 +,CR45356 + chr2L 16999044 intergenic CR45357 +,CR45356 + chr2L 16999140 intergenic CR45357 + chr2L_7_16995001 chr2L_16995001 RAL-382 619 chr2L 17000082 17000116 chr2L 17000253 17000288 17 170 14.0 9.0 11.5 1.4 206 chr2L 17000082 intergenic not near genes chr2L 17000185 intergenic not near genes chr2L 17000288 intergenic not near genes chr2L_17_17000001 chr2L_17000001 RAL-382 620 chr2L 17000122 17000141 chr2L 17000241 17000313 13 164 8.0 5.5 6.8 1.7 191 chr2L 17000122 intergenic not near genes chr2L 17000218 intergenic not near genes chr2L 17000313 intergenic not near genes chr2L_13_17000001 chr2L_17000001 RAL-382 621 chr2L 17016861 17016872 chr2L 17016988 17016999 6 127 7.0 21.0 14.0 0.4 138 chr2L 17016861 intergenic not near genes chr2L 17016930 intergenic not near genes chr2L 17016999 intergenic not near genes chr2L_6_17015001 chr2L_17015001 RAL-382 622 chr2L 17032451 17032517 chr2L 17032586 17032652 25 134 8.0 8.5 8.2 2.7 201 chr2L 17032451 intergenic not near genes chr2L 17032552 intergenic not near genes chr2L 17032652 intergenic not near genes chr2L_25_17030001 chr2L_17030001 RAL-382 623 chr2L 17070148 17070209 chr2L 17070294 17070355 30 145 5.5 1.5 3.5 6.7 207 chr2L 17070148 intergenic not near genes chr2L 17070252 intergenic not near genes chr2L 17070355 intergenic not near genes chr2L_30_17070001 chr2L_17070001 RAL-382 624 chr2L 17074649 17074667 chr2L 17074795 17074813 8 146 8.5 24.5 16.5 0.5 164 chr2L 17074649 intergenic not near genes chr2L 17074731 intergenic not near genes chr2L 17074813 intergenic not near genes chr2L_8_17070001 chr2L_17070001 RAL-382 625 chr2L 17087332 17087395 chr2L 17087500 17087563 27 165 6.0 11.5 8.8 2.8 231 chr2L 17087332 intergenic CG12620 + chr2L 17087448 intergenic CG12620 + chr2L 17087563 intergenic CG12620 + chr2L_27_17085001 chr2L_17085001 RAL-382 626 chr2L 17097143 17097196 chr2L 17097282 17097335 5 139 3.0 4.5 3.8 1.0 192 chr2L 17097143 intergenic not near genes chr2L 17097239 intergenic not near genes chr2L 17097335 intergenic not near genes chr2L_5_17095001 chr2L_17095001 RAL-382 627 chr2L 17101852 17101916 chr2L 17101979 17102019 20 120 4.0 9.5 6.8 2.6 167 chr2L 17101852 intergenic not near genes chr2L 17101936 intergenic not near genes chr2L 17102019 intergenic not near genes chr2L_20_17100001 chr2L_17100001 RAL-382 628 chr2L 17126303 17126358 chr2L 17126408 17126409 8 105 5.5 5.5 5.5 1.2 106 chr2L 17126303 intergenic CG31784 - chr2L 17126356 intergenic CG31784 - chr2L 17126409 intergenic CG31784 - chr2L_8_17125001 chr2L_17125001 RAL-382 629 chr2L 17157004 17157011 chr2L 17157153 17157174 5 159 8.5 10.0 9.2 0.5 170 chr2L 17157004 intron,intron CG34106 +,beat-IIIa + chr2L 17157089 intron,intron CG34106 +,beat-IIIa + chr2L 17157174 intron,intron CG34106 +,beat-IIIa + chr2L_5_17155001 chr2L_17155001 RAL-382 630 chr2L 17158699 17158739 chr2L 17158851 17158891 11 152 11.0 0.0 5.5 1.7 192 chr2L 17158699 5` UTR,exon CG34106 +,beat-IIIa + chr2L 17158795 intron,intron CG34106 +,beat-IIIa + chr2L 17158891 intron,intron CG34106 +,beat-IIIa + chr2L_11_17155001 chr2L_17155001 RAL-382 631 chr2L 17167520 17167590 chr2L 17167810 17167861 pogo 21 289 8.0 8.5 8.2 2.3 341 chr2L 17167520 intron,intron CG34106 +,beat-IIIa + chr2L 17167690 intron,intron CG34106 +,beat-IIIa + chr2L 17167861 intron,intron CG34106 +,beat-IIIa + chr2L_21_17165001 chr2L_17165001 RAL-382 632 chr2L 17172973 17173043 chr2L 17173256 17173326 28 283 5.5 11.5 8.5 2.9 353 chr2L 17172973 3` UTR,3` UTR CG34106 +,beat-IIIa + chr2L 17173150 intergenic CG34106 +,beat-IIIa +,CG34169 + chr2L 17173326 intergenic CG34169 +,CG34106 +,beat-IIIa + chr2L_28_17170001 chr2L_17170001 RAL-382 633 chr2L 17199119 17199132 chr2L 17200636 17200649 hobo 7 1517 20.5 9.0 14.8 0.4 1530 chr2L 17199119 intron beat-IIIc - chr2L 17199884 intron beat-IIIc - chr2L 17200649 intron beat-IIIc - chr2L_7_17195001 chr2L_17195001 RAL-382 634 chr2L 17199133 17199192 chr2L 17200630 17200709 hobo 11 1515 8.5 7.5 8.0 1.2 1576 chr2L 17199133 intron beat-IIIc - chr2L 17199921 intron beat-IIIc - chr2L 17200709 intron beat-IIIc - chr2L_11_17195001 chr2L_17195001 RAL-382 635 chr2L 17216645 17216720 chr2L 17216901 17216914 24 252 2.5 6.5 4.5 4.4 269 chr2L 17216645 intron beat-IIIc - chr2L 17216780 intron beat-IIIc - chr2L 17216914 intron beat-IIIc - chr2L_24_17215001 chr2L_17215001 RAL-382 636 chr2L 17273148 17273222 chr2L 17277980 17278039 F-element 16 4831 2.5 7.0 4.8 2.8 4891 chr2L 17273148 intergenic not near genes chr2L 17275594 intergenic not near genes chr2L 17278039 intergenic not near genes chr2L_16_17275001 chr2L_17275001 RAL-382 637 chr2L 17300843 17300914 chr2L 17301135 17301198 27 290 6.5 6.5 6.5 3.6 355 chr2L 17300843 intergenic not near genes chr2L 17301020 intergenic not near genes chr2L 17301198 intergenic not near genes chr2L_27_17300001 chr2L_17300001 RAL-382 638 chr2L 17303422 17303436 chr2L 17303633 17303663 5 219 11.5 9.5 10.5 0.4 241 chr2L 17303422 intergenic not near genes chr2L 17303542 intergenic not near genes chr2L 17303663 intergenic not near genes chr2L_5_17300001 chr2L_17300001 RAL-382 639 chr2L 17303443 17303468 chr2L 17303629 17303666 11 204 8.5 9.0 8.8 1.1 223 chr2L 17303443 intergenic not near genes chr2L 17303554 intergenic not near genes chr2L 17303666 intergenic not near genes chr2L_11_17300001 chr2L_17300001 RAL-382 640 chr2L 17331926 17331941 chr2L 17332057 17332072 7 131 10.0 17.0 13.5 0.5 146 chr2L 17331926 intergenic not near genes chr2L 17331999 intergenic not near genes chr2L 17332072 intergenic not near genes chr2L_7_17330001 chr2L_17330001 RAL-382 641 chr2L 17335560 17335578 chr2L 17337619 17337637 1360 8 2059 9.0 10.5 9.8 0.7 2077 chr2L 17335560 intergenic not near genes chr2L 17336598 intergenic not near genes chr2L 17337637 intergenic not near genes chr2L_8_17335001 chr2L_17335001 RAL-382 642 chr2L 17351900 17351956 chr2L 17352052 17352108 22 150 4.5 10.5 7.5 2.6 208 chr2L 17351900 intergenic not near genes chr2L 17352004 intergenic not near genes chr2L 17352108 intergenic not near genes chr2L_22_17350001 chr2L_17350001 RAL-382 643 chr2L 17372296 17372306 chr2L 17372426 17372436 4 130 19.0 6.5 12.8 0.3 140 chr2L 17372296 intron Lrch - chr2L 17372366 intron Lrch - chr2L 17372436 intron Lrch - chr2L_4_17370001 chr2L_17370001 RAL-382 644 chr2L 17372307 17372363 chr2L 17372423 17372493 20 129 3.5 5.5 4.5 3.6 186 chr2L 17372307 intron Lrch - chr2L 17372400 intron Lrch - chr2L 17372493 intron Lrch - chr2L_20_17370001 chr2L_17370001 RAL-382 645 chr2L 17379661 17379704 chr2L 17379796 17379839 24 134 6.0 7.0 6.5 3.2 178 chr2L 17379661 intron Lrch - chr2L 17379750 intron Lrch - chr2L 17379839 intron Lrch - chr2L_24_17375001 chr2L_17375001 RAL-382 646 chr2L 17397958 17398026 chr2L 17398088 17398166 16 138 0.0 7.0 3.5 3.6 208 chr2L 17397958 intron CLIP-190 + chr2L 17398062 intron CLIP-190 + chr2L 17398166 intron CLIP-190 + chr2L_16_17395001 chr2L_17395001 RAL-382 647 chr2L 17419249 17419267 chr2L 17419375 17419393 7 126 14.0 8.5 11.2 0.6 144 chr2L 17419249 intron Dif - chr2L 17419321 intron Dif - chr2L 17419393 intron Dif - chr2L_7_17415001 chr2L_17415001 RAL-382 648 chr2L 17432025 17432040 chr2L 17432182 17432197 1360 6 157 0.0 26.0 13.0 0.4 172 chr2L 17432025 intron Dif - chr2L 17432111 intron Dif - chr2L 17432197 intron Dif - chr2L_6_17430001 chr2L_17430001 RAL-382 649 chr2L 17511585 17511660 chr2L 17511777 17511852 17 190 3.5 5.0 4.2 3.3 267 chr2L 17511585 exon Dhc36C + chr2L 17511718 intron Dhc36C + chr2L 17511852 exon Dhc36C + chr2L_17_17510001 chr2L_17510001 RAL-382 650 chr2L 17533386 17533445 chr2L 17533523 17533572 24 137 9.5 4.5 7.0 3.0 186 chr2L 17533386 intergenic not near genes chr2L 17533479 intergenic not near genes chr2L 17533572 intergenic not near genes chr2L_24_17530001 chr2L_17530001 RAL-382 651 chr2L 17551288 17551321 chr2L 17551432 17551445 14 143 8.5 0.0 4.2 2.7 157 chr2L 17551288 intergenic not near genes chr2L 17551366 intergenic not near genes chr2L 17551445 intergenic not near genes chr2L_14_17550001 chr2L_17550001 RAL-382 652 chr2L 17577684 17577738 chr2L 17577810 17577864 23 125 7.0 9.5 8.2 2.5 180 chr2L 17577684 intergenic not near genes chr2L 17577774 intergenic not near genes chr2L 17577864 intergenic not near genes chr2L_23_17575001 chr2L_17575001 RAL-382 653 chr2L 17643276 17643355 chr2L 17643612 17643641 23 330 4.5 3.0 3.8 4.8 365 chr2L 17643276 intergenic not near genes chr2L 17643458 intergenic not near genes chr2L 17643641 intergenic not near genes chr2L_23_17640001 chr2L_17640001 RAL-382 654 chr2L 17669071 17669080 chr2L 17669198 17669207 5 127 19.5 13.5 16.5 0.3 136 chr2L 17669071 intron CadN - chr2L 17669139 intron CadN - chr2L 17669207 intron CadN - chr2L_5_17665001 chr2L_17665001 RAL-382 655 chr2L 17669083 17669123 chr2L 17669195 17669250 19 126 12.0 13.0 12.5 1.4 167 chr2L 17669083 intron CadN - chr2L 17669166 intron CadN - chr2L 17669250 intron CadN - chr2L_19_17665001 chr2L_17665001 RAL-382 656 chr2L 17687470 17687518 chr2L 17692265 17692313 F-element 21 4795 8.0 10.5 9.2 2.1 4843 chr2L 17687470 intron CadN - chr2L 17689892 intron CadN - chr2L 17692313 intron CadN - chr2L_21_17685001 chr2L_17685001 RAL-382 657 chr2L 17727824 17727872 chr2L 17729340 17729364 hobo 18 1511 7.5 10.5 9.0 1.8 1540 chr2L 17727824 intron CadN - chr2L 17728594 intron CadN - chr2L 17729364 intron CadN - chr2L_18_17725001 chr2L_17725001 RAL-382 658 chr2L 17741700 17741768 chr2L 17741834 17741903 19 134 9.0 4.5 6.8 2.4 203 chr2L 17741700 intron CadN - chr2L 17741802 intron CadN - chr2L 17741903 intron CadN - chr2L_19_17740001 chr2L_17740001 RAL-382 659 chr2L 17745914 17745983 chr2L 17747364 17747433 20 1448 6.0 5.5 5.8 2.9 1519 chr2L 17745914 intron CadN - chr2L 17746674 intron CadN - chr2L 17747433 intron CadN - chr2L_20_17745001 chr2L_17745001 RAL-382 660 chr2L 17819896 17819941 chr2L 17825129 17825194 copia 5 5248 10.0 6.5 8.2 0.5 5298 chr2L 17819896 intron CadN2 - chr2L 17822545 intron CadN2 - chr2L 17825194 intron CadN2 - chr2L_5_17820001 chr2L_17820001 RAL-382 661 chr2L 17863590 17863628 chr2L 17863795 17863833 19 205 9.0 9.5 9.2 1.9 243 chr2L 17863590 intron CadN2 - chr2L 17863712 intron CadN2 - chr2L 17863833 intron CadN2 - chr2L_19_17860001 chr2L_17860001 RAL-382 662 chr2L 17880545 17880615 chr2L 17880707 17880777 15 162 9.0 3.0 6.0 2.1 232 chr2L 17880545 intergenic not near genes chr2L 17880661 intergenic not near genes chr2L 17880777 intergenic not near genes chr2L_15_17880001 chr2L_17880001 RAL-382 663 chr2L 17911918 17911983 chr2L 17914146 17914211 pogo 20 2225 7.5 5.0 6.2 2.8 2293 chr2L 17911918 intergenic not near genes chr2L 17913064 intergenic not near genes chr2L 17914211 intergenic CG43271 - chr2L_20_17910001 chr2L_17910001 RAL-382 664 chr2L 17944081 17944141 chr2L 17944209 17944269 22 127 13.5 6.5 10.0 2.0 188 chr2L 17944081 intergenic not near genes chr2L 17944175 intergenic not near genes chr2L 17944269 intergenic not near genes chr2L_22_17940001 chr2L_17940001 RAL-382 665 chr2L 17951900 17951969 chr2L 17953417 17953486 hobo 30 1516 9.5 12.0 10.8 2.5 1586 chr2L 17951900 intergenic CR44398 -,CR44397 - chr2L 17952693 intergenic not near genes chr2L 17953486 intergenic not near genes chr2L_30_17950001 chr2L_17950001 RAL-382 666 chr2L 18051848 18051899 chr2L 18061030 18061096 roo 17 9191 6.5 9.0 7.8 1.9 9248 chr2L 18051848 intron rdo + chr2L 18056472 intron rdo + chr2L 18061096 intron rdo + chr2L_17_18055001 chr2L_18055001 RAL-382 667 chr2L 18095541 18095591 chr2L 18095672 18095722 23 131 11.0 9.0 10.0 2.1 181 chr2L 18095541 intergenic not near genes chr2L 18095632 intergenic not near genes chr2L 18095722 intergenic not near genes chr2L_23_18095001 chr2L_18095001 RAL-382 668 chr2L 18111193 18111216 chr2L 18111334 18111355 15 140 19.5 9.0 14.2 1.0 162 chr2L 18111193 intergenic not near genes chr2L 18111274 intergenic not near genes chr2L 18111355 intergenic not near genes chr2L_15_18110001 chr2L_18110001 RAL-382 669 chr2L 18145972 18146035 chr2L 18146110 18146173 27 136 5.5 9.5 7.5 3.2 201 chr2L 18145972 intron Socs36E - chr2L 18146072 intron Socs36E - chr2L 18146173 intron Socs36E - chr2L_27_18145001 chr2L_18145001 RAL-382 670 chr2L 18210184 18210247 chr2L 18210329 18210392 21 145 5.0 7.0 6.0 3.0 208 chr2L 18210184 intron CG42750 - chr2L 18210288 intron CG42750 - chr2L 18210392 intron CG42750 - chr2L_21_18210001 chr2L_18210001 RAL-382 671 chr2L 18218571 18218632 chr2L 18218709 18218770 23 137 0.0 6.0 3.0 5.8 199 chr2L 18218571 intron CG42750 - chr2L 18218670 intron CG42750 - chr2L 18218770 intron CG42750 - chr2L_23_18215001 chr2L_18215001 RAL-382 672 chr2L 18221576 18221657 chr2L 18221703 18221768 16 126 4.0 6.0 5.0 2.7 192 chr2L 18221576 intron CG42750 - chr2L 18221672 intron CG42750 - chr2L 18221768 intron CG42750 - chr2L_16_18220001 chr2L_18220001 RAL-382 673 chr2L 18239917 18239989 chr2L 18240050 18240122 23 133 5.0 2.0 3.5 5.1 205 chr2L 18239917 intron CG42750 - chr2L 18240020 intron CG42750 - chr2L 18240122 intron CG42750 - chr2L_23_18240001 chr2L_18240001 RAL-382 674 chr2L 18243331 18243359 chr2L 18243458 18243486 14 127 20.0 8.5 14.2 0.9 155 chr2L 18243331 intron CG42750 - chr2L 18243408 intron CG42750 - chr2L 18243486 intron CG42750 - chr2L_14_18240001 chr2L_18240001 RAL-382 675 chr2L 18250524 18250535 chr2L 18250686 18250697 5 162 15.5 7.5 11.5 0.4 173 chr2L 18250524 intron CG42750 - chr2L 18250610 intron CG42750 - chr2L 18250697 intron CG42750 - chr2L_5_18250001 chr2L_18250001 RAL-382 676 chr2L 18291519 18291520 chr2L 18309666 18309690 4 18164 38.0 15.0 26.5 0.1 18171 chr2L 18291519 intergenic CG43362 -,CR44693 +,CR44696 - chr2L 18300604 intergenic not near genes chr2L 18309690 5` UTR CR44694 + chr2L_4_18300001 chr2L_18300001 RAL-382 677 chr2L 18309435 18309509 chr2L 18309630 18309705 34 196 6.5 7.5 7.0 4.2 270 chr2L 18309435 5` UTR CG43354 - chr2L 18309570 intergenic CR44694 +,CG43354 - chr2L 18309705 5` UTR CR44694 + chr2L_34_18305001 chr2L_18305001 RAL-382 678 chr2L 18315223 18315273 chr2L 18315333 18315395 17 121 7.0 5.0 6.0 2.4 172 chr2L 18315223 intergenic not near genes chr2L 18315309 intergenic not near genes chr2L 18315395 intergenic not near genes chr2L_17_18315001 chr2L_18315001 RAL-382 679 chr2L 18393937 18394006 chr2L 18394067 18394136 29 127 3.0 9.5 6.2 4.0 199 chr2L 18393937 intergenic Fas3 + chr2L 18394036 intergenic not near genes chr2L 18394136 intergenic not near genes chr2L_29_18390001 chr2L_18390001 RAL-382 680 chr2L 18398368 18398433 chr2L 18398496 18398561 27 125 9.0 12.0 10.5 2.3 193 chr2L 18398368 intergenic not near genes chr2L 18398464 intergenic not near genes chr2L 18398561 intergenic not near genes chr2L_27_18395001 chr2L_18395001 RAL-382 681 chr2L 18407984 18408052 chr2L 18412818 18412894 Doc 22 4836 9.0 0.0 4.5 4.0 4910 chr2L 18407984 intergenic not near genes chr2L 18410439 intergenic not near genes chr2L 18412894 intergenic not near genes chr2L_22_18410001 chr2L_18410001 RAL-382 682 chr2L 18408053 18408057 chr2L 18412815 18412899 Doc 4 4822 8.5 0.0 4.2 0.8 4846 chr2L 18408053 intergenic not near genes chr2L 18410476 intergenic not near genes chr2L 18412899 intergenic not near genes chr2L_4_18410001 chr2L_18410001 RAL-382 683 chr2L 18441118 18441169 chr2L 18441298 18441357 16 189 3.5 9.0 6.2 2.2 239 chr2L 18441118 intergenic RpS26 - chr2L 18441238 intergenic RpS26 - chr2L 18441357 3` UTR RpS26 - chr2L_16_18440001 chr2L_18440001 RAL-382 684 chr2L 18443293 18443367 chr2L 18443425 18443502 28 134 4.5 9.0 6.8 3.6 209 chr2L 18443293 intergenic RpS26 - chr2L 18443398 intergenic RpS26 - chr2L 18443502 intergenic RpS26 - chr2L_28_18440001 chr2L_18440001 RAL-382 685 chr2L 18443561 18443631 chr2L 18443730 18443798 13 167 6.5 8.5 7.5 1.5 237 chr2L 18443561 intergenic RpS26 - chr2L 18443680 intergenic RpS26 - chr2L 18443798 intergenic not near genes chr2L_13_18440001 chr2L_18440001 RAL-382 686 chr2L 18449342 18449412 chr2L 18449493 18449563 35 151 9.0 8.5 8.8 3.6 221 chr2L 18449342 intergenic bsf -,ncm - chr2L 18449452 intergenic bsf -,ncm - chr2L 18449563 3` UTR bsf - chr2L_35_18445001 chr2L_18445001 RAL-382 687 chr2L 18482190 18482260 chr2L 18482322 18482392 20 132 4.5 9.5 7.0 2.5 202 chr2L 18482190 intron CG10283 - chr2L 18482291 intron CG10283 - chr2L 18482392 intron CG10283 - chr2L_20_18480001 chr2L_18480001 RAL-382 688 chr2L 18496388 18496439 chr2L 18496593 18496644 17 201 9.5 5.0 7.2 2.1 256 chr2L 18496388 intron kon - chr2L 18496516 intron kon - chr2L 18496644 intron kon - chr2L_17_18495001 chr2L_18495001 RAL-382 689 chr2L 18520738 18520811 chr2L 18525673 18525746 37 4936 60.0 70.5 65.2 0.6 5008 chr2L 18520738 intron CG10211 + chr2L 18523242 intron CG10211 + chr2L 18525746 intron CG10211 + chr2L_37_18520001 chr2L_18520001 RAL-382 690 chr2L 18575579 18575588 chr2L 18575726 18575735 4 147 10.5 0.0 5.2 0.6 156 chr2L 18575579 intron Pde11 - chr2L 18575657 intron Pde11 - chr2L 18575735 intron Pde11 - chr2L_4_18575001 chr2L_18575001 RAL-382 691 chr2L 18577230 18577303 chr2L 18577453 18577522 24 219 9.5 7.5 8.5 2.5 292 chr2L 18577230 intron Pde11 - chr2L 18577376 intron Pde11 - chr2L 18577522 intron Pde11 - chr2L_24_18575001 chr2L_18575001 RAL-382 692 chr2L 18622640 18622716 chr2L 18622770 18622840 22 119 8.0 3.0 5.5 3.4 200 chr2L 18622640 intron MESR3 + chr2L 18622740 intron MESR3 + chr2L 18622840 intron MESR3 + chr2L_22_18620001 chr2L_18620001 RAL-382 693 chr2L 18629347 18629402 chr2L 18629459 18629499 22 130 6.0 5.5 5.8 3.2 152 chr2L 18629347 intron MESR3 + chr2L 18629423 intron MESR3 + chr2L 18629499 intron MESR3 + chr2L_22_18625001 chr2L_18625001 RAL-382 694 chr2L 18767599 18767654 chr2L 18767728 18767783 21 125 8.5 9.5 9.0 2.1 184 chr2L 18767599 intron ham - chr2L 18767691 intron ham - chr2L 18767783 intron ham - chr2L_21_18765001 chr2L_18765001 RAL-382 695 chr2L 18767656 18767674 chr2L 18767718 18767757 10 115 6.0 8.5 7.2 1.2 101 chr2L 18767656 intron ham - chr2L 18767706 intron ham - chr2L 18767757 intron ham - chr2L_10_18765001 chr2L_18765001 RAL-382 696 chr2L 18792021 18792097 chr2L 18792163 18792223 30 140 8.0 6.5 7.2 3.7 202 chr2L 18792021 intron ham - chr2L 18792122 intron ham - chr2L 18792223 intron ham - chr2L_30_18790001 chr2L_18790001 RAL-382 697 chr2L 18811371 18811432 chr2L 18811503 18811564 30 132 13.0 5.5 9.2 2.9 193 chr2L 18811371 intergenic CG10570 -,CG42502 - chr2L 18811468 intergenic CG10570 -,CG42502 - chr2L 18811564 intergenic not near genes chr2L_30_18810001 chr2L_18810001 RAL-382 698 chr2L 18811618 18811686 chr2L 18811877 18811945 28 258 7.0 10.0 8.5 2.9 327 chr2L 18811618 intergenic not near genes chr2L 18811782 intergenic not near genes chr2L 18811945 intergenic not near genes chr2L_28_18810001 chr2L_18810001 RAL-382 699 chr2L 18812516 18812586 chr2L 18812829 18812899 31 310 0.5 8.0 4.2 6.0 383 chr2L 18812516 intergenic CG17325 +,CG42305 + chr2L 18812708 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812899 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_31_18810001 chr2L_18810001 RAL-382 700 chr2L 18846387 18846461 chr2L 18846527 18846601 21 140 8.0 10.5 9.2 2.1 214 chr2L 18846387 intron CG17321 + chr2L 18846494 intron CG17321 + chr2L 18846601 intron CG17321 + chr2L_21_18845001 chr2L_18845001 RAL-382 701 chr2L 18902577 18902650 chr2L 18902908 18902981 28 331 7.5 10.0 8.8 2.9 404 chr2L 18902577 intergenic not near genes chr2L 18902779 intergenic not near genes chr2L 18902981 intergenic not near genes chr2L_28_18900001 chr2L_18900001 RAL-382 702 chr2L 18926530 18926575 chr2L 18926686 18926732 15 155 5.5 0.5 3.0 3.8 202 chr2L 18926530 intron ssp3 - chr2L 18926631 intron ssp3 - chr2L 18926732 intron ssp3 - chr2L_15_18925001 chr2L_18925001 RAL-382 703 chr2L 19051584 19051600 chr2L 19051765 19051781 4 181 18.0 17.0 17.5 0.2 197 chr2L 19051584 5` UTR l(2)37Bb - chr2L 19051682 intergenic l(2)37Bb -,Rpn3 + chr2L 19051781 intergenic Rpn3 +,l(2)37Bb - chr2L_4_19050001 chr2L_19050001 RAL-382 704 chr2L 19120994 19121009 chr2L 19121122 19121137 10 128 19.0 5.0 12.0 0.8 143 chr2L 19120994 intergenic l(2)37Cc - chr2L 19121066 intergenic l(2)37Cc - chr2L 19121137 intergenic l(2)37Cc - chr2L_10_19120001 chr2L_19120001 RAL-382 705 chr2L 19121010 19121072 chr2L 19121118 19121201 17 127 4.5 4.5 4.5 3.1 191 chr2L 19121010 intergenic l(2)37Cc - chr2L 19121106 intergenic l(2)37Cc - chr2L 19121201 intergenic l(2)37Cc - chr2L_17_19120001 chr2L_19120001 RAL-382 706 chr2L 19145140 19145190 chr2L 19145275 19145292 10 129 12.0 8.0 10.0 0.9 152 chr2L 19145140 intron brat + chr2L 19145216 intron brat + chr2L 19145292 intron brat + chr2L_10_19145001 chr2L_19145001 RAL-382 707 chr2L 19147332 19147392 chr2L 19154410 19154477 297 25 7082 9.0 11.0 10.0 2.3 7145 chr2L 19147332 intron brat + chr2L 19150904 intron brat + chr2L 19154477 intron brat + chr2L_25_19150001 chr2L_19150001 RAL-382 708 chr2L 19189919 19189943 chr2L 19190123 19190147 6 204 24.5 7.5 16.0 0.4 228 chr2L 19189919 3` UTR pigeon + chr2L 19190033 intergenic pigeon +,drl + chr2L 19190147 intergenic drl +,pigeon + chr2L_6_19190001 chr2L_19190001 RAL-382 709 chr2L 19189948 19189987 chr2L 19190152 19190191 17 204 12.0 11.0 11.5 1.4 243 chr2L 19189948 intergenic pigeon +,drl + chr2L 19190070 intergenic pigeon +,drl + chr2L 19190191 intergenic drl +,pigeon + chr2L_17_19190001 chr2L_19190001 RAL-382 710 chr2L 19209574 19209648 chr2L 19209709 19209784 35 134 6.0 5.0 5.5 5.4 210 chr2L 19209574 intergenic not near genes chr2L 19209679 intergenic not near genes chr2L 19209784 intergenic not near genes chr2L_35_19205001 chr2L_19205001 RAL-382 711 chr2L 19246780 19246847 chr2L 19246910 19246977 34 128 11.0 6.5 8.8 3.5 197 chr2L 19246780 intergenic not near genes chr2L 19246878 intergenic not near genes chr2L 19246977 intergenic not near genes chr2L_34_19245001 chr2L_19245001 RAL-382 712 chr2L 19265697 19265712 chr2L 19266089 19266104 9 391 5.0 14.0 9.5 0.9 407 chr2L 19265697 intergenic not near genes chr2L 19265900 intergenic not near genes chr2L 19266104 intergenic not near genes chr2L_9_19265001 chr2L_19265001 RAL-382 713 chr2L 19344983 19345037 chr2L 19357242 19357280 blood 27 12258 11.0 10.5 10.8 2.3 12297 chr2L 19344983 intron dnt - chr2L 19351132 intron dnt - chr2L 19357280 intron dnt - chr2L_27_19350001 chr2L_19350001 RAL-382 714 chr2L 19357497 19357569 chr2L 19357637 19357680 37 134 7.0 7.0 7.0 4.6 183 chr2L 19357497 intron dnt - chr2L 19357588 intron dnt - chr2L 19357680 intron dnt - chr2L_37_19355001 chr2L_19355001 RAL-382 715 chr2L 19374449 19374519 chr2L 19374600 19374678 36 158 6.5 10.5 8.5 3.8 229 chr2L 19374449 intergenic not near genes chr2L 19374564 intergenic not near genes chr2L 19374678 intergenic not near genes chr2L_36_19370001 chr2L_19370001 RAL-382 716 chr2L 19380458 19380470 chr2L 19380588 19380600 4 130 14.5 6.5 10.5 0.3 142 chr2L 19380458 intergenic CG17350 + chr2L 19380529 intergenic CG17350 + chr2L 19380600 intergenic CG17350 + chr2L_4_19380001 chr2L_19380001 RAL-382 717 chr2L 19380476 19380529 chr2L 19380587 19380659 19 129 3.0 6.5 4.8 3.3 183 chr2L 19380476 intergenic CG17350 + chr2L 19380568 intergenic CG17350 + chr2L 19380659 intergenic CG17350 + chr2L_19_19380001 chr2L_19380001 RAL-382 718 chr2L 19405573 19405642 chr2L 19405713 19405782 33 139 4.5 3.5 4.0 6.6 209 chr2L 19405573 intron Pax - chr2L 19405678 intron Pax - chr2L 19405782 intron Pax - chr2L_33_19405001 chr2L_19405001 RAL-382 719 chr2L 19407666 19407739 chr2L 19407913 19407986 37 245 6.5 9.0 7.8 4.2 320 chr2L 19407666 intron Pax - chr2L 19407826 intron Pax - chr2L 19407986 intron Pax - chr2L_37_19405001 chr2L_19405001 RAL-382 720 chr2L 19441018 19441081 chr2L 19441145 19441176 18 124 8.0 8.5 8.2 2.0 158 chr2L 19441018 intron CG10237 - chr2L 19441097 intron CG10237 - chr2L 19441176 5` UTR CG10237 - chr2L_18_19440001 chr2L_19440001 RAL-382 721 chr2L 19557779 19557982 chr2L 19557920 19558112 23 139 1.5 2.0 1.8 8.2 333 chr2L 19557779 intergenic Tep5 + chr2L 19557946 intergenic Tep5 + chr2L 19558112 exon Tep5 + chr2L_23_19555001 chr2L_19555001 RAL-382 722 chr2L 19558481 19558491 chr2L 19558635 19558645 6 154 5.0 7.0 6.0 0.9 164 chr2L 19558481 intron Tep5 + chr2L 19558563 intron Tep5 + chr2L 19558645 intron Tep5 + chr2L_6_19555001 chr2L_19555001 RAL-382 723 chr2L 19558492 19558541 chr2L 19558633 19558695 17 153 0.5 6.5 3.5 3.8 203 chr2L 19558492 intron Tep5 + chr2L 19558594 intron Tep5 + chr2L 19558695 intron Tep5 + chr2L_17_19555001 chr2L_19555001 RAL-382 724 chr2L 19559405 19559500 chr2L 19559501 19559649 4 143 0.0 0.0 0.0 4.0 244 chr2L 19559405 exon Tep5 + chr2L 19559527 intron Tep5 + chr2L 19559649 intron Tep5 + chr2L_4_19555001 chr2L_19555001 RAL-382 725 chr2L 19559954 19560034 chr2L 19560257 19560335 25 300 6.5 8.5 7.5 2.9 381 chr2L 19559954 exon Tep5 + chr2L 19560144 exon Tep5 + chr2L 19560335 intron Tep5 + chr2L_25_19560001 chr2L_19560001 RAL-382 726 chr2L 19560800 19560865 chr2L 19560930 19561010 22 136 8.0 0.0 4.0 4.4 210 chr2L 19560800 exon Tep5 + chr2L 19560905 exon Tep5 + chr2L 19561010 exon Tep5 + chr2L_22_19560001 chr2L_19560001 RAL-382 727 chr2L 19561291 19561368 chr2L 19561484 19561559 25 188 10.0 5.0 7.5 2.9 268 chr2L 19561291 exon Tep5 + chr2L 19561425 exon Tep5 + chr2L 19561559 exon Tep5 + chr2L_25_19560001 chr2L_19560001 RAL-382 728 chr2L 19576615 19576691 chr2L 19576754 19576830 44 135 8.0 9.5 8.8 4.5 215 chr2L 19576615 intron spi - chr2L 19576722 intron spi - chr2L 19576830 intron spi - chr2L_44_19575001 chr2L_19575001 RAL-382 729 chr2L 19608557 19608610 chr2L 19608698 19608751 12 141 4.5 5.5 5.0 2.0 194 chr2L 19608557 intron Lar + chr2L 19608654 intron Lar + chr2L 19608751 intron Lar + chr2L_12_19605001 chr2L_19605001 RAL-382 730 chr2L 19620081 19620104 chr2L 19621086 19621143 jockey 10 1030 8.0 5.0 6.5 1.3 1062 chr2L 19620081 intron Lar + chr2L 19620612 intron Lar + chr2L 19621143 intron Lar + chr2L_10_19620001 chr2L_19620001 RAL-382 731 chr2L 19627275 19627322 chr2L 19627413 19627459 15 135 11.5 15.5 13.5 1.0 184 chr2L 19627275 intron Lar + chr2L 19627367 intron Lar + chr2L 19627459 intron Lar + chr2L_15_19625001 chr2L_19625001 RAL-382 732 chr2L 19652522 19652598 chr2L 19674008 19674081 opus 33 21484 5.5 10.0 7.8 3.7 21559 chr2L 19652522 intron Lar + chr2L 19663302 intron Lar + chr2L 19674081 intron Lar + chr2L_33_19660001 chr2L_19660001 RAL-382 733 chr2L 19678166 19678213 chr2L 19678295 19678345 19 132 6.0 9.5 7.8 2.2 179 chr2L 19678166 intron Lar + chr2L 19678256 intron Lar + chr2L 19678345 intron Lar + chr2L_19_19675001 chr2L_19675001 RAL-382 734 chr2L 19703498 19703528 chr2L 19712684 19712714 roo 12 9186 16.5 11.0 13.8 0.8 9216 chr2L 19703498 intron Lar + chr2L 19708106 intron Lar + chr2L 19712714 intron Lar + chr2L_12_19705001 chr2L_19705001 RAL-382 735 chr2L 19703537 19703561 chr2L 19712681 19712747 roo 16 9178 10.5 10.5 10.5 1.4 9210 chr2L 19703537 intron Lar + chr2L 19708142 intron Lar + chr2L 19712747 intron Lar + chr2L_16_19705001 chr2L_19705001 RAL-382 736 chr2L 19737357 19737360 chr2L 19740855 19740869 1360 4 3508 5.5 11.0 8.2 0.4 3512 chr2L 19737357 intergenic Nf-YB + chr2L 19739113 intergenic not near genes chr2L 19740869 intergenic not near genes chr2L_4_19735001 chr2L_19735001 RAL-382 737 chr2L 19737369 19737382 chr2L 19740846 19740901 1360 7 3504 2.5 9.5 6.0 1.0 3532 chr2L 19737369 intergenic Nf-YB + chr2L 19739135 intergenic not near genes chr2L 19740901 intergenic not near genes chr2L_7_19735001 chr2L_19735001 RAL-382 738 chr2L 19762776 19762828 chr2L 19763050 19763120 pogo 14 288 6.0 4.5 5.2 2.3 344 chr2L 19762776 exon fbp - chr2L 19762948 intron fbp - chr2L 19763120 intron fbp - chr2L_14_19760001 chr2L_19760001 RAL-382 739 chr2L 19776220 19776290 chr2L 19776368 19776438 32 147 6.5 6.5 6.5 4.3 218 chr2L 19776220 3` UTR CdGAPr - chr2L 19776329 3` UTR CdGAPr - chr2L 19776438 3` UTR CdGAPr - chr2L_32_19775001 chr2L_19775001 RAL-382 740 chr2L 19800976 19800990 chr2L 19801110 19801117 5 133 19.5 7.0 13.2 0.4 141 chr2L 19800976 intron sick + chr2L 19801046 intron sick + chr2L 19801117 intron sick + chr2L_5_19800001 chr2L_19800001 RAL-382 741 chr2L 19800992 19801050 chr2L 19801103 19801184 21 126 8.0 5.5 6.8 2.7 192 chr2L 19800992 intron sick + chr2L 19801088 intron sick + chr2L 19801184 intron sick + chr2L_21_19800001 chr2L_19800001 RAL-382 742 chr2L 19821757 19821821 chr2L 19821869 19821948 33 125 6.5 5.5 6.0 4.7 191 chr2L 19821757 intron sick + chr2L 19821852 intron sick + chr2L 19821948 intron sick + chr2L_33_19820001 chr2L_19820001 RAL-382 743 chr2L 19824363 19824427 chr2L 19824496 19824560 25 133 4.5 10.5 7.5 2.9 197 chr2L 19824363 intron sick + chr2L 19824462 intron sick + chr2L 19824560 intron sick + chr2L_25_19820001 chr2L_19820001 RAL-382 744 chr2L 19856345 19856420 chr2L 19856640 19856714 22 291 6.5 8.5 7.5 2.6 369 chr2L 19856345 intron sick + chr2L 19856530 intron sick + chr2L 19856714 intron sick + chr2L_22_19855001 chr2L_19855001 RAL-382 745 chr2L 19871553 19871573 chr2L 19871658 19871704 8 132 0.0 12.5 6.2 1.1 151 chr2L 19871553 intron sick + chr2L 19871628 intron sick + chr2L 19871704 intron sick + chr2L_8_19870001 chr2L_19870001 RAL-382 746 chr2L 19947643 19947671 chr2L 19947770 19947803 5 131 6.5 4.0 5.2 0.8 160 chr2L 19947643 intron sick + chr2L 19947723 intron sick + chr2L 19947803 intron sick + chr2L_5_19945001 chr2L_19945001 RAL-382 747 chr2L 19972885 19972960 chr2L 19973023 19973078 26 137 6.0 6.5 6.2 3.6 193 chr2L 19972885 intron CG43861 - chr2L 19972982 intron CG43861 - chr2L 19973078 intron CG43861 - chr2L_26_19970001 chr2L_19970001 RAL-382 748 chr2L 19994569 19994657 chr2L 19994822 19994857 8 237 0.0 3.5 1.8 2.9 288 chr2L 19994569 intron CG43861 - chr2L 19994713 intron CG43861 - chr2L 19994857 intron CG43861 - chr2L_8_19990001 chr2L_19990001 RAL-382 749 chr2L 20005829 20005861 chr2L 20010955 20010987 flea 14 5126 17.5 8.0 12.8 1.0 5158 chr2L 20005829 intron CG43861 - chr2L 20008408 intron CG43861 - chr2L 20010987 intron CG43861 - chr2L_14_20005001 chr2L_20005001 RAL-382 750 chr2L 20005863 20005894 chr2L 20010951 20011020 flea 19 5123 10.5 7.0 8.8 1.9 5157 chr2L 20005863 intron CG43861 - chr2L 20008442 intron CG43861 - chr2L 20011020 intron CG43861 - chr2L_19_20005001 chr2L_20005001 RAL-382 751 chr2L 20036489 20036554 chr2L 20036623 20036688 27 133 8.0 11.5 9.8 2.5 199 chr2L 20036489 intron sNPF + chr2L 20036588 intron sNPF + chr2L 20036688 intron sNPF + chr2L_27_20035001 chr2L_20035001 RAL-382 752 chr2L 20041385 20041421 chr2L 20041515 20041551 15 132 19.5 9.5 14.5 1.0 166 chr2L 20041385 intron sNPF + chr2L 20041468 intron sNPF + chr2L 20041551 intron sNPF + chr2L_15_20040001 chr2L_20040001 RAL-382 753 chr2L 20041425 20041460 chr2L 20041514 20041545 11 124 10.0 9.5 9.8 1.0 120 chr2L 20041425 intron sNPF + chr2L 20041485 intron sNPF + chr2L 20041545 intron sNPF + chr2L_11_20040001 chr2L_20040001 RAL-382 754 chr2L 20046512 20046522 chr2L 20046651 20046661 4 139 28.5 7.5 18.0 0.2 149 chr2L 20046512 intron sNPF + chr2L 20046586 intron sNPF + chr2L 20046661 intron sNPF + chr2L_4_20045001 chr2L_20045001 RAL-382 755 chr2L 20046526 20046586 chr2L 20046645 20046674 19 119 11.5 7.0 9.2 1.9 148 chr2L 20046526 intron sNPF + chr2L 20046600 intron sNPF + chr2L 20046674 intron sNPF + chr2L_19_20045001 chr2L_20045001 RAL-382 756 chr2L 20079477 20079478 chr2L 20079648 20079649 4 171 27.5 8.5 18.0 0.2 172 chr2L 20079477 intron,intron neb +,fok - chr2L 20079563 intron,intron neb +,fok - chr2L 20079649 intron,intron neb +,fok - chr2L_4_20075001 chr2L_20075001 RAL-382 757 chr2L 20079479 20079535 chr2L 20079645 20079661 22 167 13.5 8.5 11.0 1.8 182 chr2L 20079479 intron,intron neb +,fok - chr2L 20079570 intron,intron neb +,fok - chr2L 20079661 intron,intron neb +,fok - chr2L_22_20075001 chr2L_20075001 RAL-382 758 chr2L 20085453 20085498 chr2L 20085556 20085589 18 123 1.0 7.0 4.0 3.6 136 chr2L 20085453 intron neb + chr2L 20085521 intron neb + chr2L 20085589 intron neb + chr2L_18_20085001 chr2L_20085001 RAL-382 759 chr2L 20087218 20087271 chr2L 20087364 20087417 28 146 12.5 10.5 11.5 2.2 199 chr2L 20087218 intron neb + chr2L 20087318 intron neb + chr2L 20087417 intron neb + chr2L_28_20085001 chr2L_20085001 RAL-382 760 chr2L 20127440 20127510 chr2L 20127717 20127787 30 276 13.0 5.0 9.0 3.0 347 chr2L 20127440 intergenic not near genes chr2L 20127614 intergenic not near genes chr2L 20127787 intergenic not near genes chr2L_30_20125001 chr2L_20125001 RAL-382 761 chr2L 20225590 20225617 chr2L 20225718 20225745 13 128 4.5 18.5 11.5 1.0 155 chr2L 20225590 intergenic not near genes chr2L 20225668 intergenic not near genes chr2L 20225745 intergenic not near genes chr2L_13_20225001 chr2L_20225001 RAL-382 762 chr2L 20272079 20272142 chr2L 20282840 20282858 copia 37 10760 8.5 13.5 11.0 3.1 10779 chr2L 20272079 intergenic not near genes chr2L 20277468 intergenic not near genes chr2L 20282858 intergenic not near genes chr2L_37_20275001 chr2L_20275001 RAL-382 763 chr2L 20303161 20303183 chr2L 20310679 20310701 blood 8 7518 0.5 19.0 9.8 0.7 7540 chr2L 20303161 intergenic not near genes chr2L 20306931 intergenic not near genes chr2L 20310701 intergenic not near genes chr2L_8_20305001 chr2L_20305001 RAL-382 764 chr2L 20310834 20310891 chr2L 20310964 20311021 18 128 3.5 8.5 6.0 2.6 187 chr2L 20310834 intergenic spir + chr2L 20310928 intergenic spir + chr2L 20311021 intergenic spir + chr2L_18_20310001 chr2L_20310001 RAL-382 765 chr2L 20368105 20368118 chr2L 20368304 20368317 8 198 10.0 11.5 10.8 0.7 212 chr2L 20368105 intergenic not near genes chr2L 20368211 intergenic not near genes chr2L 20368317 intergenic not near genes chr2L_8_20365001 chr2L_20365001 RAL-382 766 chr2L 20368119 20368144 chr2L 20368280 20368302 8 189 6.5 7.0 6.8 1.0 183 chr2L 20368119 intergenic not near genes chr2L 20368210 intergenic not near genes chr2L 20368302 intergenic not near genes chr2L_8_20365001 chr2L_20365001 RAL-382 767 chr2L 20372190 20372245 chr2L 20372481 20372536 pogo 28 290 6.0 13.5 9.8 2.6 346 chr2L 20372190 intergenic Ugt37a1 - chr2L 20372363 intergenic Ugt37a1 - chr2L 20372536 exon Ugt37a1 - chr2L_28_20370001 chr2L_20370001 RAL-382 768 chr2L 20376046 20376112 chr2L 20376916 20376980 41 868 47.5 61.5 54.5 0.7 934 chr2L 20376046 intergenic not near genes chr2L 20376513 intergenic CG16798 - chr2L 20376980 3` UTR CG16798 - chr2L_41_20375001 chr2L_20375001 RAL-382 769 chr2L 20407744 20407794 chr2L 20412926 20412969 flea 8 5172 15.5 4.5 10.0 0.7 5225 chr2L 20407744 intron CG10947 - chr2L 20410356 intron CG10947 - chr2L 20412969 intron CG10947 - chr2L_8_20410001 chr2L_20410001 RAL-382 770 chr2L 20429630 20429706 chr2L 20429794 20429870 10 160 4.0 8.0 6.0 1.4 240 chr2L 20429630 intron CG31688 + chr2L 20429750 intron CG31688 + chr2L 20429870 intron CG31688 + chr2L_10_20425001 chr2L_20425001 RAL-382 771 chr2L 20498638 20498708 chr2L 20498787 20498857 31 149 9.0 8.5 8.8 3.2 219 chr2L 20498638 intergenic not near genes chr2L 20498748 intergenic not near genes chr2L 20498857 intergenic not near genes chr2L_31_20495001 chr2L_20495001 RAL-382 772 chr2L 20568611 20568679 chr2L 20569051 20569108 X-element 33 437 16.0 6.0 11.0 2.8 497 chr2L 20568611 intron CR45347 + chr2L 20568860 intron CR45347 + chr2L 20569108 intron CR45347 + chr2L_33_20565001 chr2L_20565001 RAL-382 773 chr2L 20576173 20576243 chr2L 20583691 20583736 blood 19 7515 9.5 7.5 8.5 2.0 7563 chr2L 20576173 intergenic CR45347 + chr2L 20579954 intergenic not near genes chr2L 20583736 3` UTR CR44909 - chr2L_19_20575001 chr2L_20575001 RAL-382 774 chr2L 20597040 20597117 chr2L 20597166 20597216 13 119 4.0 5.5 4.8 2.2 176 chr2L 20597040 intron CR44909 - chr2L 20597128 intron CR44909 - chr2L 20597216 intron CR44909 - chr2L_13_20595001 chr2L_20595001 RAL-382 775 chr2L 20602668 20602747 chr2L 20602806 20602888 17 139 0.0 5.0 2.5 4.9 220 chr2L 20602668 intron CR44909 - chr2L 20602778 intron CR44909 - chr2L 20602888 intron CR44909 - chr2L_17_20600001 chr2L_20600001 RAL-382 776 chr2L 20611179 20611264 chr2L 20611321 20611394 18 136 2.0 5.0 3.5 4.0 215 chr2L 20611179 intron CR44909 - chr2L 20611286 intron CR44909 - chr2L 20611394 intron CR44909 - chr2L_18_20610001 chr2L_20610001 RAL-382 777 chr2L 20637019 20637022 chr2L 23016848 23016851 NOF 4 2379829 0.0 27.0 13.5 0.3 2379832 chr2L 20637019 intergenic not near genes chr2L 21826935 intergenic not near genes chr2L 23016851 intron Cht3 - chr2L_4_21825001 chr2L_21825001 RAL-382 778 chr2L 20643292 20643339 chr2L 20643474 20643521 23 182 7.0 11.5 9.2 2.3 229 chr2L 20643292 intergenic CG17470 -,phr6-4 - chr2L 20643406 3` UTR phr6-4 - chr2L 20643521 3` UTR phr6-4 - chr2L_23_20640001 chr2L_20640001 RAL-382 779 chr2L 20668655 20668719 chr2L 20668779 20668818 6 116 10.5 11.0 10.8 0.5 163 chr2L 20668655 intron CG31678 - chr2L 20668736 intron CG31678 - chr2L 20668818 intron CG31678 - chr2L_6_20665001 chr2L_20665001 RAL-382 780 chr2L 20669912 20669988 chr2L 20670042 20670118 37 129 9.5 10.5 10.0 3.4 206 chr2L 20669912 intron CG31678 - chr2L 20670015 intron CG31678 - chr2L 20670118 intron CG31678 - chr2L_37_20670001 chr2L_20670001 RAL-382 781 chr2L 20671680 20671741 chr2L 20671824 20671885 22 137 9.0 7.5 8.2 2.4 205 chr2L 20671680 intron CG31678 - chr2L 20671782 intron CG31678 - chr2L 20671885 intron CG31678 - chr2L_22_20670001 chr2L_20670001 RAL-382 782 chr2L 20674781 20674864 chr2L 20674916 20674992 12 130 5.5 1.5 3.5 2.7 211 chr2L 20674781 intron CG31678 - chr2L 20674886 intron CG31678 - chr2L 20674992 intron CG31678 - chr2L_12_20670001 chr2L_20670001 RAL-382 783 chr2L 20778209 20778265 chr2L 20778342 20778392 26 130 5.0 8.0 6.5 3.5 183 chr2L 20778209 intron cad + chr2L 20778300 intron cad + chr2L 20778392 intron cad + chr2L_26_20775001 chr2L_20775001 RAL-382 784 chr2L 20818466 20818470 chr2L 20818597 20818601 4 131 19.0 15.0 17.0 0.2 135 chr2L 20818466 exon CheB38a - chr2L 20818534 intergenic CheB38a - chr2L 20818601 intergenic CheB38a - chr2L_4_20815001 chr2L_20815001 RAL-382 785 chr2L 20818471 20818541 chr2L 20818595 20818673 29 129 9.0 13.0 11.0 2.4 202 chr2L 20818471 exon CheB38a - chr2L 20818572 intergenic CheB38a - chr2L 20818673 intergenic CheB38a - chr2L_29_20815001 chr2L_20815001 RAL-382 786 chr2L 20839981 20840051 chr2L 20840243 20840313 25 258 7.0 6.5 6.8 3.2 332 chr2L 20839981 intergenic not near genes chr2L 20840147 intergenic not near genes chr2L 20840313 intergenic CG31676 + chr2L_25_20840001 chr2L_20840001 RAL-382 787 chr2L 20891485 20891542 chr2L 20896636 20896693 jockey 21 5149 3.5 8.5 6.0 3.0 5208 chr2L 20891485 intron,intron CG43739 -,sky - chr2L 20894089 intron,intron CG43739 -,sky - chr2L 20896693 intron,intron CG43739 -,sky - chr2L_21_20890001 chr2L_20890001 RAL-382 788 chr2L 20901423 20901486 chr2L 20902619 20902700 1360 6 1207 5.5 6.0 5.8 0.9 1277 chr2L 20901423 intron,intron CG43739 -,sky - chr2L 20902062 intron,intron CG43739 -,sky - chr2L 20902700 intron,intron CG43739 -,sky - chr2L_6_20900001 chr2L_20900001 RAL-382 789 chr2L 20906779 20906848 chr2L 20907012 20907081 22 233 2.5 10.0 6.2 3.1 302 chr2L 20906779 intron,intron CG43739 -,sky - chr2L 20906930 intron,intron CG43739 -,sky - chr2L 20907081 intron,intron CG43739 -,sky - chr2L_22_20905001 chr2L_20905001 RAL-382 790 chr2L 20946895 20946961 chr2L 20947032 20947095 32 136 9.0 9.5 9.2 3.1 200 chr2L 20946895 intergenic CR44606 - chr2L 20946995 intergenic CR44606 - chr2L 20947095 intergenic CR44606 - chr2L_32_20945001 chr2L_20945001 RAL-382 791 chr2L 20967037 20967087 chr2L 20967173 20967223 17 133 7.5 10.0 8.8 1.7 186 chr2L 20967037 3` UTR CG42238 - chr2L 20967130 3` UTR CG42238 - chr2L 20967223 3` UTR CG42238 - chr2L_17_20965001 chr2L_20965001 RAL-382 792 chr2L 20976604 20976662 chr2L 20981469 20981526 X-element 29 4864 9.0 8.0 8.5 3.1 4922 chr2L 20976604 intron CG42238 - chr2L 20979065 intron CG42238 - chr2L 20981526 intron CG42238 - chr2L_29_20975001 chr2L_20975001 RAL-382 793 chr2L 20984693 20984762 chr2L 20984835 20984901 32 140 11.5 8.0 9.8 3.0 208 chr2L 20984693 intron CG42238 - chr2L 20984797 intron CG42238 - chr2L 20984901 intron CG42238 - chr2L_32_20980001 chr2L_20980001 RAL-382 794 chr2L 20986859 20986936 chr2L 20987246 20987303 34 385 5.5 9.0 7.2 4.1 444 chr2L 20986859 intron CG42238 - chr2L 20987081 intron CG42238 - chr2L 20987303 intron CG42238 - chr2L_34_20985001 chr2L_20985001 RAL-382 795 chr2L 20990996 20991056 chr2L 20991119 20991184 18 126 7.5 7.5 7.5 2.1 188 chr2L 20990996 intron CG42238 - chr2L 20991090 intron CG42238 - chr2L 20991184 intron CG42238 - chr2L_18_20990001 chr2L_20990001 RAL-382 796 chr2L 21020236 21020293 chr2L 21023963 21024020 NOF 19 3722 10.0 10.0 10.0 1.7 3784 chr2L 21020236 intron CG42238 - chr2L 21022128 intron CG42238 - chr2L 21024020 intron CG42238 - chr2L_19_21020001 chr2L_21020001 RAL-382 797 chr2L 21041095 21041166 chr2L 21049406 21049467 Tirant 23 8307 5.0 10.5 7.8 2.6 8372 chr2L 21041095 intron CG42238 - chr2L 21045281 intron CG42238 - chr2L 21049467 intron CG42238 - chr2L_23_21045001 chr2L_21045001 RAL-382 798 chr2L 21074877 21074948 chr2L 21075018 21075089 29 141 8.5 7.5 8.0 3.2 212 chr2L 21074877 intergenic not near genes chr2L 21074983 intergenic tadr + chr2L 21075089 intergenic tadr + chr2L_29_21070001 chr2L_21070001 RAL-382 799 chr2L 21113640 21113709 chr2L 21113783 21113852 25 138 8.5 6.5 7.5 2.9 212 chr2L 21113640 intron Nhe2 + chr2L 21113746 intron Nhe2 + chr2L 21113852 intron Nhe2 + chr2L_25_21110001 chr2L_21110001 RAL-382 800 chr2L 21186384 21186413 chr2L 21186673 21186678 4 273 11.0 7.0 9.0 0.4 294 chr2L 21186384 intron Ret - chr2L 21186531 intron Ret - chr2L 21186678 intron Ret - chr2L_4_21185001 chr2L_21185001 RAL-382 801 chr2L 21286564 21286629 chr2L 21286692 21286758 22 128 13.0 14.0 13.5 1.5 194 chr2L 21286564 exon Mio - chr2L 21286661 intron Mio - chr2L 21286758 intron Mio - chr2L_22_21285001 chr2L_21285001 RAL-382 802 chr2L 21347508 21347540 chr2L 21355030 21355061 blood 11 7520 25.0 8.0 16.5 0.6 7553 chr2L 21347508 intron Tsp39D + chr2L 21351284 intron Tsp39D + chr2L 21355061 intron Tsp39D + chr2L_11_21350001 chr2L_21350001 RAL-382 803 chr2L 21347543 21347570 chr2L 21355026 21355091 blood 19 7518 16.0 8.0 12.0 1.5 7548 chr2L 21347543 intron Tsp39D + chr2L 21351317 intron Tsp39D + chr2L 21355091 intron Tsp39D + chr2L_19_21350001 chr2L_21350001 RAL-382 804 chr2L 21596989 21597059 chr2L 21604783 21604793 roo 12 7785 7.0 14.0 10.5 1.0 7804 chr2L 21596989 intergenic not near genes chr2L 21600891 intergenic not near genes chr2L 21604793 intergenic not near genes chr2L_12_21600001 chr2L_21600001 RAL-382 805 chr2L 21691785 21691801 chr2L 21698305 21698321 Burdock 9 6520 23.0 0.0 11.5 0.7 6536 chr2L 21691785 intron CG31619 + chr2L 21695053 intron CG31619 + chr2L 21698321 intron CG31619 + chr2L_9_21695001 chr2L_21695001 RAL-382 806 chr2L 21691802 21691824 chr2L 21698302 21698329 Burdock 7 6513 16.5 0.0 8.2 0.8 6527 chr2L 21691802 intron CG31619 + chr2L 21695066 intron CG31619 + chr2L 21698329 intron CG31619 + chr2L_7_21695001 chr2L_21695001 RAL-382 807 chr2L 21788696 21788761 chr2L 21788824 21788886 25 127 11.0 8.5 9.8 2.3 190 chr2L 21788696 intron CG31612 - chr2L 21788791 intron CG31612 - chr2L 21788886 intron CG31612 - chr2L_25_21785001 chr2L_21785001 RAL-382 808 chr2L 21819278 21819360 chr2L 21819416 21819468 29 132 6.5 5.0 5.8 4.3 190 chr2L 21819278 intergenic CR44786 + chr2L 21819373 intergenic CR44786 + chr2L 21819468 intergenic CR44786 + chr2L_29_21815001 chr2L_21815001 RAL-382 809 chr2L 21838958 21839033 chr2L 21839084 21839159 38 125 14.0 10.5 12.2 2.9 201 chr2L 21838958 intergenic not near genes chr2L 21839058 intergenic not near genes chr2L 21839159 intergenic not near genes chr2L_38_21835001 chr2L_21835001 RAL-382 810 chr2L 21852330 21852369 chr2L 21852695 21852734 14 363 14.0 7.0 10.5 1.2 404 chr2L 21852330 intergenic not near genes chr2L 21852532 intergenic not near genes chr2L 21852734 intergenic not near genes chr2L_14_21850001 chr2L_21850001 RAL-382 811 chr2L 21898800 21898859 chr2L 21898978 21899037 23 178 15.0 11.5 13.2 1.6 237 chr2L 21898800 intergenic not near genes chr2L 21898918 intergenic not near genes chr2L 21899037 intergenic not near genes chr2L_23_21895001 chr2L_21895001 RAL-382 812 chr2L 21929034 21929062 chr2L 21929186 21929214 4 147 14.0 15.0 14.5 0.3 180 chr2L 21929034 intergenic not near genes chr2L 21929124 intergenic not near genes chr2L 21929214 intergenic not near genes chr2L_4_21925001 chr2L_21925001 RAL-382 813 chr2L 21953793 21953813 chr2L 21954644 21954720 34 853 46.0 74.0 60.0 0.6 927 chr2L 21953793 intergenic not near genes chr2L 21954256 intergenic not near genes chr2L 21954720 intergenic not near genes chr2L_34_21950001 chr2L_21950001 RAL-382 814 chr2L 21981643 21981715 chr2L 21990858 21990896 roo 28 9210 8.5 10.0 9.2 2.7 9253 chr2L 21981643 exon CG2528 - chr2L 21986270 intron CG2528 - chr2L 21990896 exon CG2528 - chr2L_28_21985001 chr2L_21985001 RAL-382 815 chr2L 22005717 22005794 chr2L 22005857 22005933 28 137 6.0 7.0 6.5 3.7 216 chr2L 22005717 intergenic not near genes chr2L 22005825 intergenic not near genes chr2L 22005933 intergenic not near genes chr2L_28_22005001 chr2L_22005001 RAL-382 816 chr2L 22047203 22047256 chr2L 22047378 22047431 19 172 3.5 11.0 7.2 2.3 228 chr2L 22047203 intergenic not near genes chr2L 22047317 intergenic not near genes chr2L 22047431 intergenic not near genes chr2L_19_22045001 chr2L_22045001 RAL-382 817 chr2L 22082201 22082213 chr2L 22082342 22082354 INE-1 9 141 9.0 16.5 12.8 0.7 153 chr2L 22082201 intergenic not near genes chr2L 22082278 intergenic not near genes chr2L 22082354 intergenic not near genes chr2L_9_22080001 chr2L_22080001 RAL-382 818 chr2L 22164957 22164978 chr2L 22165136 22165157 22 178 0.0 16.5 8.2 2.4 200 chr2L 22164957 3` UTR CG42748 + chr2L 22165057 3` UTR CG42748 + chr2L 22165157 3` UTR CG42748 + chr2L_22_22165001 chr2L_22165001 RAL-382 819 chr2L 22165477 22165532 chr2L 22165612 22165667 27 135 15.5 16.0 15.8 1.6 190 chr2L 22165477 3` UTR CG42748 + chr2L 22165572 3` UTR CG42748 + chr2L 22165667 3` UTR CG42748 + chr2L_27_22165001 chr2L_22165001 RAL-382 820 chr2L 22197846 22197908 chr2L 22198095 22198151 24 249 11.0 8.0 9.5 2.3 305 chr2L 22197846 intron Ir40a - chr2L 22197998 intron Ir40a - chr2L 22198151 intron Ir40a - chr2L_24_22195001 chr2L_22195001 RAL-382 821 chr2L 22228097 22228107 chr2L 22228228 22228238 7 131 22.0 9.5 15.8 0.4 141 chr2L 22228097 intergenic not near genes chr2L 22228168 intergenic not near genes chr2L 22228238 intergenic not near genes chr2L_7_22225001 chr2L_22225001 RAL-382 822 chr2L 22228108 22228118 chr2L 22228226 22228249 8 126 20.5 9.5 15.0 0.5 141 chr2L 22228108 intergenic not near genes chr2L 22228178 intergenic not near genes chr2L 22228249 intergenic not near genes chr2L_8_22225001 chr2L_22225001 RAL-382 823 chr2L 22296865 22296918 chr2L 22297042 22297095 12 177 8.0 10.5 9.2 1.2 230 chr2L 22296865 intergenic not near genes chr2L 22296980 intergenic not near genes chr2L 22297095 intergenic not near genes chr2L_12_22295001 chr2L_22295001 RAL-382 824 chr2L 22515102 22515123 chr2L 22522602 22522623 HMS-Beagle2 6 7499 15.5 0.0 7.8 0.7 7521 chr2L 22515102 intergenic not near genes chr2L 22518862 intergenic not near genes chr2L 22522623 intergenic not near genes chr2L_6_22515001 chr2L_22515001 RAL-382 825 chr2L 22548892 22548929 chr2L 22550140 22550204 1360 10 1262 0.0 11.0 5.5 1.5 1312 chr2L 22548892 intergenic CG17490 + chr2L 22549548 intergenic not near genes chr2L 22550204 intergenic CG17493 + chr2L_10_22545001 chr2L_22545001 RAL-382 826 chr2L 22558127 22558155 chr2L 22558247 22558281 5 123 8.5 13.0 10.8 0.4 154 chr2L 22558127 intergenic not near genes chr2L 22558204 intergenic not near genes chr2L 22558281 intergenic not near genes chr2L_5_22555001 chr2L_22555001 RAL-382 827 chr2L 22558340 22558416 chr2L 22558701 22558777 42 361 16.0 8.5 12.2 3.2 437 chr2L 22558340 intergenic not near genes chr2L 22558558 intergenic not near genes chr2L 22558777 intergenic not near genes chr2L_42_22555001 chr2L_22555001 RAL-382 828 chr2L 22581944 22582002 chr2L 22583778 22583842 S-element 14 1839 10.5 11.0 10.8 1.2 1898 chr2L 22581944 intron CG17494 + chr2L 22582893 intron CG17494 + chr2L 22583842 intron CG17494 + chr2L_14_22580001 chr2L_22580001 RAL-382 829 chr2L 22674027 22674048 chr2L 22674154 22674175 9 127 3.0 12.5 7.8 1.0 148 chr2L 22674027 intron CG40006 - chr2L 22674101 intron CG40006 - chr2L 22674175 intron CG40006 - chr2L_9_22670001 chr2L_22670001 RAL-382 830 chr2L 22679808 22679815 chr2L 22684630 22684637 F-element 4 4822 12.5 19.5 16.0 0.2 4829 chr2L 22679808 intron CG40006 - chr2L 22682222 intron CG40006 - chr2L 22684637 intron CG40006 - chr2L_4_22680001 chr2L_22680001 RAL-382 831 chr2L 22776373 22776447 chr2L 22778212 22778286 S-element 41 1839 11.0 8.0 9.5 3.9 1913 chr2L 22776373 intergenic not near genes chr2L 22777330 intergenic not near genes chr2L 22778286 intergenic not near genes chr2L_41_22775001 chr2L_22775001 RAL-382 832 chr2R 469923 469959 chr2R 473214 473217 F-element 12 3288 6.0 14.0 10.0 1.1 3294 chr2R 469923 intergenic not near genes chr2R 471570 intergenic not near genes chr2R 473217 intergenic not near genes chr2R_12_470001 chr2R_470001 RAL-382 833 chr2R 529319 529339 chr2R 537994 538014 Max-element 7 8675 7.0 14.5 10.8 0.6 8695 chr2R 529319 intron CG40378 + chr2R 533666 intron CG40378 + chr2R 538014 intron CG40378 + chr2R_7_530001 chr2R_530001 RAL-382 834 chr2R 529342 529347 chr2R 537975 538022 Max-element 6 8663 5.5 11.0 8.2 0.7 8680 chr2R 529342 intron CG40378 + chr2R 533682 intron CG40378 + chr2R 538022 intron CG40378 + chr2R_6_530001 chr2R_530001 RAL-382 835 chr2R 1082367 1082371 chr2R 1087193 1087197 Doc 5 4826 8.5 20.5 14.5 0.3 4830 chr2R 1082367 intron rl + chr2R 1084782 intron rl + chr2R 1087197 intron rl + chr2R_5_1080001 chr2R_1080001 RAL-382 836 chr2R 1516564 1516603 chr2R 1521342 1521381 1731 44 4776 67.0 52.5 59.8 0.7 4817 chr2R 1516564 exon Maf1 - chr2R 1518972 intron Maf1 - chr2R 1521381 5` UTR Maf1 - chr2R_44_1515001 chr2R_1515001 RAL-382 837 chr2R 2314723 2314781 chr2R 2314877 2314934 11 150 6.0 7.5 6.8 1.4 211 chr2R 2314723 intergenic not near genes chr2R 2314828 intergenic not near genes chr2R 2314934 intergenic not near genes chr2R_11_2310001 chr2R_2310001 RAL-382 838 chr2R 2498944 2499008 chr2R 2508141 2508158 roo 21 9194 13.0 6.5 9.8 1.9 9214 chr2R 2498944 intron MFS17 - chr2R 2503551 intron MFS17 - chr2R 2508158 intron MFS17 - chr2R_21_2500001 chr2R_2500001 RAL-382 839 chr2R 2591487 2591509 chr2R 2594213 2594234 roo 5 2726 49.0 32.0 40.5 0.1 2747 chr2R 2591487 intergenic not near genes chr2R 2592860 intergenic not near genes chr2R 2594234 intergenic not near genes chr2R_5_2590001 chr2R_2590001 RAL-382 840 chr2R 2920249 2920269 chr2R 2921446 2921466 6 1197 20.5 20.5 20.5 0.3 1217 chr2R 2920249 intergenic not near genes chr2R 2920858 intergenic not near genes chr2R 2921466 intergenic not near genes chr2R_6_2920001 chr2R_2920001 RAL-382 841 chr2R 3144039 3144110 chr2R 3393367 3393438 Doc 20 249328 39.5 41.0 40.2 0.5 249399 chr2R 3144039 intron CG42596 + chr2R 3268738 intergenic not near genes chr2R 3393438 intergenic not near genes chr2R_20_3265001 chr2R_3265001 RAL-382 842 chr2R 3291926 3292102 chr2R 3915103 3915313 4 623206 22.5 39.5 31.0 0.1 623387 chr2R 3291926 intergenic not near genes chr2R 3603620 intergenic not near genes chr2R 3915313 intron uex - chr2R_4_3600001 chr2R_3600001 RAL-382 843 chr2R 3532578 3532629 chr2R 3536071 3536122 Doc 18 3493 7.5 8.0 7.8 2.0 3544 chr2R 3532578 intergenic not near genes chr2R 3534350 intergenic not near genes chr2R 3536122 intergenic not near genes chr2R_18_3530001 chr2R_3530001 RAL-382 844 chr2R 4602795 4602814 chr2R 4603199 4603219 7 405 16.0 6.5 11.2 0.6 424 chr2R 4602795 intron p120ctn + chr2R 4603007 intron p120ctn + chr2R 4603219 intron p120ctn + chr2R_7_4600001 chr2R_4600001 RAL-382 845 chr2R 4602815 4602869 chr2R 4603196 4603274 13 399 6.0 5.5 5.8 1.9 459 chr2R 4602815 intron p120ctn + chr2R 4603044 intron p120ctn + chr2R 4603274 intron p120ctn + chr2R_13_4600001 chr2R_4600001 RAL-382 846 chr2R 4622911 4622978 chr2R 4624120 4624187 1360 21 1206 5.5 13.0 9.2 2.1 1276 chr2R 4622911 intergenic CR44101 - chr2R 4623549 intergenic not near genes chr2R 4624187 intergenic not near genes chr2R_21_4620001 chr2R_4620001 RAL-382 847 chr2R 4688103 4688125 chr2R 4688246 4688268 13 142 6.5 15.0 10.8 1.1 165 chr2R 4688103 intergenic not near genes chr2R 4688186 intergenic not near genes chr2R 4688268 intergenic not near genes chr2R_13_4685001 chr2R_4685001 RAL-382 848 chr2R 4731906 4731942 chr2R 4732039 4732075 9 133 12.0 12.5 12.2 0.7 169 chr2R 4731906 intergenic not near genes chr2R 4731990 intergenic not near genes chr2R 4732075 intergenic not near genes chr2R_9_4730001 chr2R_4730001 RAL-382 849 chr2R 4783205 4783269 chr2R 4783389 4783453 16 180 5.0 12.5 8.8 1.6 248 chr2R 4783205 intergenic not near genes chr2R 4783329 intergenic not near genes chr2R 4783453 intergenic not near genes chr2R_16_4780001 chr2R_4780001 RAL-382 850 chr2R 4821171 4821244 chr2R 4821307 4821380 45 135 4.0 11.0 7.5 5.3 209 chr2R 4821171 intron CG17528 - chr2R 4821276 intron CG17528 - chr2R 4821380 intron CG17528 - chr2R_45_4820001 chr2R_4820001 RAL-382 851 chr2R 4838834 4838895 chr2R 4840407 4840468 transib2 19 1570 8.5 8.0 8.2 2.1 1634 chr2R 4838834 intergenic not near genes chr2R 4839651 intergenic not near genes chr2R 4840468 intergenic not near genes chr2R_19_4835001 chr2R_4835001 RAL-382 852 chr2R 4870695 4870741 chr2R 4871256 4871302 R1A1-element 11 560 6.0 6.5 6.2 1.5 607 chr2R 4870695 intergenic not near genes chr2R 4870998 intergenic not near genes chr2R 4871302 intergenic not near genes chr2R_11_4870001 chr2R_4870001 RAL-382 853 chr2R 4887571 4887628 chr2R 4887817 4887874 20 245 9.5 8.5 9.0 2.0 303 chr2R 4887571 intergenic not near genes chr2R 4887722 intergenic not near genes chr2R 4887874 intergenic not near genes chr2R_20_4885001 chr2R_4885001 RAL-382 854 chr2R 4908873 4908923 chr2R 4909011 4909061 18 135 10.5 11.5 11.0 1.5 188 chr2R 4908873 intergenic not near genes chr2R 4908967 intergenic not near genes chr2R 4909061 intergenic not near genes chr2R_18_4905001 chr2R_4905001 RAL-382 855 chr2R 4933360 4933387 chr2R 4933948 4934001 11 607 4.0 7.5 5.8 1.6 641 chr2R 4933360 intron Ir41a + chr2R 4933680 intron Ir41a + chr2R 4934001 intron Ir41a + chr2R_11_4930001 chr2R_4930001 RAL-382 856 chr2R 4938461 4938531 chr2R 4938647 4938709 15 180 9.5 3.5 6.5 2.0 248 chr2R 4938461 intron Ir41a + chr2R 4938585 intron Ir41a + chr2R 4938709 intron Ir41a + chr2R_15_4935001 chr2R_4935001 RAL-382 857 chr2R 4940917 4940989 chr2R 4943417 4943485 7 2499 0.0 3.5 1.8 2.5 2568 chr2R 4940917 intron Ir41a + chr2R 4942201 intron Ir41a + chr2R 4943485 intron Ir41a + chr2R_7_4940001 chr2R_4940001 RAL-382 858 chr2R 5102998 5103045 chr2R 5103130 5103177 12 128 16.5 6.5 11.5 1.0 179 chr2R 5102998 intergenic not near genes chr2R 5103088 intergenic not near genes chr2R 5103177 intergenic not near genes chr2R_12_5100001 chr2R_5100001 RAL-382 859 chr2R 5103047 5103067 chr2R 5103129 5103199 4 120 11.0 6.5 8.8 0.4 152 chr2R 5103047 intergenic not near genes chr2R 5103123 intergenic not near genes chr2R 5103199 intergenic not near genes chr2R_4_5100001 chr2R_5100001 RAL-382 860 chr2R 5125199 5125268 chr2R 5125567 5125636 22 367 10.0 3.0 6.5 2.9 437 chr2R 5125199 intron gus - chr2R 5125418 intron gus - chr2R 5125636 intron gus - chr2R_22_5125001 chr2R_5125001 RAL-382 861 chr2R 5192692 5192731 chr2R 5192819 5192858 17 126 6.5 15.0 10.8 1.4 166 chr2R 5192692 intron Nipped-A - chr2R 5192775 intron Nipped-A - chr2R 5192858 intron Nipped-A - chr2R_17_5190001 chr2R_5190001 RAL-382 862 chr2R 5322586 5322596 chr2R 5323048 5323058 INE-1 6 462 16.5 8.5 12.5 0.4 472 chr2R 5322586 intron sxc + chr2R 5322822 intron sxc + chr2R 5323058 intron sxc + chr2R_6_5320001 chr2R_5320001 RAL-382 863 chr2R 5363450 5363510 chr2R 5363578 5363638 28 126 13.5 10.0 11.8 2.2 188 chr2R 5363450 5` UTR CR42646 + chr2R 5363544 intron CR42646 + chr2R 5363638 intron CR42646 + chr2R_28_5360001 chr2R_5360001 RAL-382 864 chr2R 5417949 5418018 chr2R 5420631 5420700 Burdock 32 2681 9.5 7.0 8.2 3.5 2751 chr2R 5417949 intron laccase2 + chr2R 5419324 intron laccase2 + chr2R 5420700 intron laccase2 + chr2R_32_5415001 chr2R_5415001 RAL-382 865 chr2R 5455728 5455800 chr2R 5455856 5455928 17 127 6.0 5.5 5.8 2.5 200 chr2R 5455728 3` UTR laccase2 + chr2R 5455828 3` UTR laccase2 + chr2R 5455928 3` UTR laccase2 + chr2R_17_5455001 chr2R_5455001 RAL-382 866 chr2R 5472332 5472367 chr2R 5472471 5472511 13 142 10.0 10.0 10.0 1.2 179 chr2R 5472332 intron CG30440 - chr2R 5472422 intron CG30440 - chr2R 5472511 intron CG30440 - chr2R_13_5470001 chr2R_5470001 RAL-382 867 chr2R 5472369 5472394 chr2R 5472466 5472538 11 136 5.0 9.5 7.2 1.3 169 chr2R 5472369 intron CG30440 - chr2R 5472454 intron CG30440 - chr2R 5472538 intron CG30440 - chr2R_11_5470001 chr2R_5470001 RAL-382 868 chr2R 5473326 5473397 chr2R 5473465 5473502 19 143 7.0 8.5 7.8 2.2 176 chr2R 5473326 intron CG30440 - chr2R 5473414 intron CG30440 - chr2R 5473502 intron CG30440 - chr2R_19_5470001 chr2R_5470001 RAL-382 869 chr2R 5504470 5504476 chr2R 5504601 5504607 INE-1 5 131 11.5 7.0 9.2 0.5 137 chr2R 5504470 intron,intron CG30438 +,TpnC4 - chr2R 5504538 intron,intron CG30438 +,TpnC4 - chr2R 5504607 intron,intron CG30438 +,TpnC4 - chr2R_5_5500001 chr2R_5500001 RAL-382 870 chr2R 5604848 5604921 chr2R 5604974 5605047 24 126 11.5 7.5 9.5 2.3 199 chr2R 5604848 intergenic Fis1 - chr2R 5604948 intergenic Fis1 - chr2R 5605047 intergenic Fis1 - chr2R_24_5600001 chr2R_5600001 RAL-382 871 chr2R 5653311 5653380 chr2R 5653460 5653529 30 149 9.5 12.0 10.8 2.5 218 chr2R 5653311 intergenic CG1344 +,CG11665 - chr2R 5653420 intergenic CG1344 + chr2R 5653529 intergenic CG1344 + chr2R_30_5650001 chr2R_5650001 RAL-382 872 chr2R 5664255 5664315 chr2R 5664400 5664460 18 143 8.0 7.5 7.8 2.0 205 chr2R 5664255 5` UTR CR45472 + chr2R 5664358 intron CR45472 + chr2R 5664460 intron CR45472 + chr2R_18_5660001 chr2R_5660001 RAL-382 873 chr2R 5678718 5678732 chr2R 5679095 5679109 INE-1 11 377 7.5 10.5 9.0 1.1 391 chr2R 5678718 intron scaf - chr2R 5678914 intron scaf - chr2R 5679109 intron scaf - chr2R_11_5675001 chr2R_5675001 RAL-382 874 chr2R 5710605 5710683 chr2R 5710732 5710769 31 124 9.5 9.5 9.5 3.0 164 chr2R 5710605 intron ap - chr2R 5710687 intron ap - chr2R 5710769 intron ap - chr2R_31_5710001 chr2R_5710001 RAL-382 875 chr2R 5750407 5750453 chr2R 5750543 5750589 17 133 14.0 13.0 13.5 1.2 182 chr2R 5750407 intergenic not near genes chr2R 5750498 intergenic not near genes chr2R 5750589 intergenic not near genes chr2R_17_5750001 chr2R_5750001 RAL-382 876 chr2R 5760464 5760528 chr2R 5760617 5760681 30 153 12.0 9.5 10.8 2.5 217 chr2R 5760464 intergenic CG7791 -,Gp210 + chr2R 5760572 intergenic CG7791 -,Gp210 + chr2R 5760681 intergenic Gp210 +,CG7791 - chr2R_30_5760001 chr2R_5760001 RAL-382 877 chr2R 5790417 5790487 chr2R 5790552 5790622 36 134 14.5 7.0 10.8 3.1 205 chr2R 5790417 intergenic not near genes chr2R 5790520 intergenic not near genes chr2R 5790622 intergenic not near genes chr2R_36_5790001 chr2R_5790001 RAL-382 878 chr2R 5834029 5834105 chr2R 5834316 5834392 52 286 11.0 11.0 11.0 4.3 363 chr2R 5834029 intron dpr12 + chr2R 5834210 intron dpr12 + chr2R 5834392 intron dpr12 + chr2R_52_5830001 chr2R_5830001 RAL-382 879 chr2R 5861245 5861312 chr2R 5861416 5861483 15 159 5.5 5.5 5.5 2.3 238 chr2R 5861245 intergenic dpr12 + chr2R 5861364 intergenic not near genes chr2R 5861483 intergenic not near genes chr2R_15_5860001 chr2R_5860001 RAL-382 880 chr2R 5869230 5869309 chr2R 5874356 5874429 flea 26 5125 6.5 10.5 8.5 2.7 5199 chr2R 5869230 intergenic not near genes chr2R 5871830 intergenic not near genes chr2R 5874429 intergenic not near genes chr2R_26_5870001 chr2R_5870001 RAL-382 881 chr2R 5878883 5878891 chr2R 5879013 5879021 8 129 19.5 11.0 15.2 0.5 138 chr2R 5878883 intergenic CG44438 - chr2R 5878952 intergenic CG44438 - chr2R 5879021 intergenic CG44438 - chr2R_8_5875001 chr2R_5875001 RAL-382 882 chr2R 5878892 5878953 chr2R 5879011 5879083 27 129 6.5 9.5 8.0 3.0 191 chr2R 5878892 intergenic CG44438 - chr2R 5878988 intergenic CG44438 - chr2R 5879083 intergenic CG44438 - chr2R_27_5875001 chr2R_5875001 RAL-382 883 chr2R 5885204 5885378 chr2R 5885330 5885551 31 173 0.5 0.5 0.5 20.7 347 chr2R 5885204 5` UTR CR44125 + chr2R 5885378 5` UTR CR44125 + chr2R 5885551 5` UTR CR44125 + chr2R_31_5885001 chr2R_5885001 RAL-382 884 chr2R 5889855 5889930 chr2R 5889997 5890072 27 140 6.5 4.5 5.5 4.2 217 chr2R 5889855 intergenic not near genes chr2R 5889964 intergenic not near genes chr2R 5890072 intergenic not near genes chr2R_27_5885001 chr2R_5885001 RAL-382 885 chr2R 5902114 5902184 chr2R 5909723 5909793 17.6 22 7607 11.0 9.5 10.2 2.0 7679 chr2R 5902114 5` UTR CG43366 + chr2R 5905954 intron CG43366 + chr2R 5909793 intron CG43366 + chr2R_22_5905001 chr2R_5905001 RAL-382 886 chr2R 6065710 6065778 chr2R 6065872 6065909 12 153 7.0 4.0 5.5 1.8 199 chr2R 6065710 intron CCHa2-R + chr2R 6065810 intron CCHa2-R + chr2R 6065909 exon CCHa2-R + chr2R_12_6065001 chr2R_6065001 RAL-382 887 chr2R 6088322 6088388 chr2R 6088465 6088531 35 143 12.5 8.0 10.2 3.1 209 chr2R 6088322 intergenic not near genes chr2R 6088426 intergenic not near genes chr2R 6088531 intergenic not near genes chr2R_35_6085001 chr2R_6085001 RAL-382 888 chr2R 6091597 6091656 chr2R 6091723 6091782 36 126 17.0 14.0 15.5 2.2 185 chr2R 6091597 3` UTR EcR - chr2R 6091690 3` UTR EcR - chr2R 6091782 3` UTR EcR - chr2R_36_6090001 chr2R_6090001 RAL-382 889 chr2R 6091658 6091668 chr2R 6091714 6091794 13 119 18.0 15.5 16.8 0.7 136 chr2R 6091658 3` UTR EcR - chr2R 6091726 3` UTR EcR - chr2R 6091794 3` UTR EcR - chr2R_13_6090001 chr2R_6090001 RAL-382 890 chr2R 6096690 6096714 chr2R 6101938 6101944 BS 5 5244 14.5 11.5 13.0 0.4 5254 chr2R 6096690 intron EcR - chr2R 6099317 intron EcR - chr2R 6101944 intron EcR - chr2R_5_6095001 chr2R_6095001 RAL-382 891 chr2R 6096717 6096744 chr2R 6101937 6101959 BS 10 5230 9.5 11.5 10.5 0.9 5242 chr2R 6096717 intron EcR - chr2R 6099338 intron EcR - chr2R 6101959 intron EcR - chr2R_10_6095001 chr2R_6095001 RAL-382 892 chr2R 6119567 6119633 chr2R 6119702 6119768 32 134 9.0 7.5 8.2 3.5 201 chr2R 6119567 intron EcR - chr2R 6119668 intron EcR - chr2R 6119768 intron EcR - chr2R_32_6115001 chr2R_6115001 RAL-382 893 chr2R 6151470 6151489 chr2R 6151596 6151615 7 126 8.5 10.0 9.2 0.7 145 chr2R 6151470 intron EcR - chr2R 6151542 intron EcR - chr2R 6151615 intron EcR - chr2R_7_6150001 chr2R_6150001 RAL-382 894 chr2R 6173505 6173576 chr2R 6173633 6173704 31 124 6.5 9.5 8.0 3.4 199 chr2R 6173505 intergenic Cyp6w1 + chr2R 6173604 intergenic Cyp6w1 + chr2R 6173704 5` UTR Cyp6w1 + chr2R_31_6170001 chr2R_6170001 RAL-382 895 chr2R 6194639 6194696 chr2R 6194772 6194809 17 131 9.5 11.5 10.5 1.5 170 chr2R 6194639 intron Ptr - chr2R 6194724 intron Ptr - chr2R 6194809 intron Ptr - chr2R_17_6190001 chr2R_6190001 RAL-382 896 chr2R 6198738 6198747 chr2R 6198878 6198887 6 140 6.0 31.5 18.8 0.3 149 chr2R 6198738 intergenic CG30432 - chr2R 6198812 intergenic not near genes chr2R 6198887 intergenic not near genes chr2R_6_6195001 chr2R_6195001 RAL-382 897 chr2R 6203828 6203885 chr2R 6203979 6203989 20 148 8.0 4.5 6.2 2.8 161 chr2R 6203828 intron CG30431 + chr2R 6203908 intron CG30431 + chr2R 6203989 intron CG30431 + chr2R_20_6200001 chr2R_6200001 RAL-382 898 chr2R 6494488 6494548 chr2R 6499300 6499360 F-element 23 4809 7.0 10.5 8.8 2.3 4872 chr2R 6494488 intergenic not near genes chr2R 6496924 intergenic not near genes chr2R 6499360 intergenic not near genes chr2R_23_6495001 chr2R_6495001 RAL-382 899 chr2R 6555606 6555668 chr2R 6555929 6555991 16 320 8.0 9.0 8.5 1.7 385 chr2R 6555606 intron jing + chr2R 6555798 intron jing + chr2R 6555991 intron jing + chr2R_16_6555001 chr2R_6555001 RAL-382 900 chr2R 6579761 6579803 chr2R 6584898 6584940 flea 21 5137 7.0 8.5 7.8 2.4 5179 chr2R 6579761 intron jing + chr2R 6582350 intron jing + chr2R 6584940 intron jing + chr2R_21_6580001 chr2R_6580001 RAL-382 901 chr2R 6633154 6633232 chr2R 6633281 6633348 30 126 11.5 13.0 12.2 2.3 194 chr2R 6633154 intergenic Vha16-1 -,Trap1 - chr2R 6633251 intergenic Vha16-1 -,Trap1 - chr2R 6633348 intergenic Vha16-1 -,Trap1 - chr2R_30_6630001 chr2R_6630001 RAL-382 902 chr2R 6691079 6691145 chr2R 6691208 6691269 34 129 13.0 12.0 12.5 2.5 190 chr2R 6691079 intron CG9422 + chr2R 6691174 intron CG9422 + chr2R 6691269 intron CG9422 + chr2R_34_6690001 chr2R_6690001 RAL-382 903 chr2R 6696565 6696629 chr2R 6696698 6696762 15 131 7.5 8.0 7.8 1.7 197 chr2R 6696565 5` UTR Mob4 - chr2R 6696664 intergenic Mob4 -,Rab2 + chr2R 6696762 5` UTR Rab2 + chr2R_15_6695001 chr2R_6695001 RAL-382 904 chr2R 6699551 6699617 chr2R 6699686 6699752 42 133 7.0 17.5 12.2 3.2 201 chr2R 6699551 intergenic Rab2 + chr2R 6699652 intergenic Rab2 + chr2R 6699752 intergenic Rab2 +,CG3409 -,CG45092 - chr2R_42_6695001 chr2R_6695001 RAL-382 905 chr2R 6712537 6712601 chr2R 6712684 6712747 20 145 7.0 8.0 7.5 2.4 210 chr2R 6712537 intron,intron CG3409 -,CG45092 - chr2R 6712642 intron,intron CG3409 -,CG45092 - chr2R 6712747 intron,intron CG3409 -,CG45092 - chr2R_20_6710001 chr2R_6710001 RAL-382 906 chr2R 6795688 6795715 chr2R 6795835 6795862 11 147 18.5 21.5 20.0 0.5 174 chr2R 6795688 intron Epac - chr2R 6795775 intron Epac - chr2R 6795862 intron Epac - chr2R_11_6795001 chr2R_6795001 RAL-382 907 chr2R 6799260 6799283 chr2R 6799440 6799463 11 180 7.0 18.0 12.5 0.8 203 chr2R 6799260 intergenic Epac - chr2R 6799362 intergenic Epac - chr2R 6799463 intergenic not near genes chr2R_11_6795001 chr2R_6795001 RAL-382 908 chr2R 6865652 6865711 chr2R 6865786 6865856 12 141 0.0 7.5 3.8 2.5 204 chr2R 6865652 intron coro - chr2R 6865754 intron coro - chr2R 6865856 intron coro - chr2R_12_6865001 chr2R_6865001 RAL-382 909 chr2R 6867273 6867332 chr2R 6867604 6867667 27 331 8.5 13.5 11.0 2.2 394 chr2R 6867273 intron coro - chr2R 6867470 intron coro - chr2R 6867667 intron coro - chr2R_27_6865001 chr2R_6865001 RAL-382 910 chr2R 6876175 6876250 chr2R 6876307 6876382 35 131 10.0 6.5 8.2 3.8 207 chr2R 6876175 5` UTR,intron CR44169 +,Spn42Da - chr2R 6876278 5` UTR,intron CR44169 +,Spn42Da - chr2R 6876382 intron,intron CR44169 +,Spn42Da - chr2R_35_6875001 chr2R_6875001 RAL-382 911 chr2R 6881455 6881517 chr2R 6881597 6881659 28 142 8.0 17.0 12.5 2.1 204 chr2R 6881455 intron Spn42Dc + chr2R 6881557 intron Spn42Dc + chr2R 6881659 intron Spn42Dc + chr2R_28_6880001 chr2R_6880001 RAL-382 912 chr2R 6918380 6918389 chr2R 6918508 6918517 6 128 21.0 9.0 15.0 0.4 137 chr2R 6918380 intron CG30158 + chr2R 6918448 intron CG30158 + chr2R 6918517 intron CG30158 + chr2R_6_6915001 chr2R_6915001 RAL-382 913 chr2R 6918392 6918417 chr2R 6918506 6918545 5 125 14.5 8.5 11.5 0.4 153 chr2R 6918392 intron CG30158 + chr2R 6918468 intron CG30158 + chr2R 6918545 intron CG30158 + chr2R_5_6915001 chr2R_6915001 RAL-382 914 chr2R 6918418 6918446 chr2R 6918505 6918534 7 111 12.0 8.5 10.2 0.6 116 chr2R 6918418 intron CG30158 + chr2R 6918476 intron CG30158 + chr2R 6918534 intron CG30158 + chr2R_7_6915001 chr2R_6915001 RAL-382 915 chr2R 6952118 6952185 chr2R 6959750 6959815 opus 28 7629 9.5 12.0 10.8 2.4 7697 chr2R 6952118 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R 6955966 intron,intron mim -,CheB42c - chr2R 6959815 intron,intron mim -,CheB42c - chr2R_28_6955001 chr2R_6955001 RAL-382 916 chr2R 6964232 6964309 chr2R 6964359 6964430 34 127 11.0 11.0 11.0 2.8 198 chr2R 6964232 intron,intron mim -,CheB42c - chr2R 6964331 intron,intron mim -,CheB42c - chr2R 6964430 intron,intron mim -,CheB42c - chr2R_34_6960001 chr2R_6960001 RAL-382 917 chr2R 7091173 7091206 chr2R 7091305 7091338 16 132 21.5 11.5 16.5 0.9 165 chr2R 7091173 intron esn + chr2R 7091256 intron esn + chr2R 7091338 intron esn + chr2R_16_7090001 chr2R_7090001 RAL-382 918 chr2R 7091209 7091237 chr2R 7091303 7091369 13 129 13.5 11.5 12.5 1.0 160 chr2R 7091209 intron esn + chr2R 7091289 intron esn + chr2R 7091369 intron esn + chr2R_13_7090001 chr2R_7090001 RAL-382 919 chr2R 7164058 7164127 chr2R 7164242 7164311 34 184 7.0 8.0 7.5 4.0 253 chr2R 7164058 intron pk + chr2R 7164184 intron pk + chr2R 7164311 intron pk + chr2R_34_7160001 chr2R_7160001 RAL-382 920 chr2R 7175454 7175482 chr2R 7175583 7175611 12 128 15.0 9.5 12.2 0.9 157 chr2R 7175454 intron pk + chr2R 7175532 intron pk + chr2R 7175611 intron pk + chr2R_12_7175001 chr2R_7175001 RAL-382 921 chr2R 7175485 7175524 chr2R 7175573 7175650 20 122 6.0 11.0 8.5 2.1 165 chr2R 7175485 intron pk + chr2R 7175568 intron pk + chr2R 7175650 intron pk + chr2R_20_7175001 chr2R_7175001 RAL-382 922 chr2R 7196529 7196588 chr2R 7201354 7201412 F-element 27 4825 12.0 11.0 11.5 2.2 4883 chr2R 7196529 intron pk + chr2R 7198970 intron pk + chr2R 7201412 intron pk + chr2R_27_7195001 chr2R_7195001 RAL-382 923 chr2R 7209844 7209869 chr2R 7217638 7217680 roo 7 7804 3.5 0.5 2.0 2.3 7836 chr2R 7209844 intron pk + chr2R 7213762 intron pk + chr2R 7217680 intron pk + chr2R_7_7210001 chr2R_7210001 RAL-382 924 chr2R 7226597 7226669 chr2R 7226742 7226797 27 138 2.5 7.5 5.0 4.5 200 chr2R 7226597 intergenic not near genes chr2R 7226697 intergenic not near genes chr2R 7226797 intergenic not near genes chr2R_27_7225001 chr2R_7225001 RAL-382 925 chr2R 7235785 7235835 chr2R 7240918 7240976 jockey 15 5139 12.0 5.5 8.8 1.5 5191 chr2R 7235785 intergenic not near genes chr2R 7238380 intergenic not near genes chr2R 7240976 intergenic not near genes chr2R_15_7235001 chr2R_7235001 RAL-382 926 chr2R 7262148 7262206 chr2R 7269259 7269317 297 19 7107 11.0 12.5 11.8 1.5 7169 chr2R 7262148 intergenic not near genes chr2R 7265732 intergenic not near genes chr2R 7269317 intergenic not near genes chr2R_19_7265001 chr2R_7265001 RAL-382 927 chr2R 7285013 7285089 chr2R 7285163 7285240 30 146 3.5 9.0 6.2 4.2 227 chr2R 7285013 intron pwn + chr2R 7285126 intron pwn + chr2R 7285240 intron pwn + chr2R_30_7285001 chr2R_7285001 RAL-382 928 chr2R 7290142 7290218 chr2R 7290294 7290370 22 148 10.0 8.0 9.0 2.2 228 chr2R 7290142 intron pwn + chr2R 7290256 intron pwn + chr2R 7290370 intron pwn + chr2R_22_7290001 chr2R_7290001 RAL-382 929 chr2R 7434856 7434898 chr2R 7439206 7439249 Juan 19 4351 11.0 11.5 11.2 1.6 4393 chr2R 7434856 3` UTR so + chr2R 7437052 intergenic not near genes chr2R 7439249 intergenic not near genes chr2R_19_7435001 chr2R_7435001 RAL-382 930 chr2R 7459235 7459254 chr2R 7459373 7459392 12 138 20.5 8.0 14.2 0.8 157 chr2R 7459235 intergenic Inos -,CG11141 - chr2R 7459314 intergenic CG11141 -,Inos - chr2R 7459392 intergenic CG11141 - chr2R_12_7455001 chr2R_7455001 RAL-382 931 chr2R 7608364 7608434 chr2R 7613614 7613657 I-element 27 5250 8.0 6.0 7.0 3.4 5293 chr2R 7608364 intron CG1358 - chr2R 7611010 intron CG1358 - chr2R 7613657 intron CG1358 - chr2R_27_7610001 chr2R_7610001 RAL-382 932 chr2R 7694545 7694612 chr2R 7694679 7694731 28 127 6.0 15.5 10.8 2.4 186 chr2R 7694545 intron CG1399 - chr2R 7694638 intron CG1399 - chr2R 7694731 intron CG1399 - chr2R_28_7690001 chr2R_7690001 RAL-382 933 chr2R 7815629 7815692 chr2R 7822148 7822211 Burdock 41 6518 11.5 9.0 10.2 3.7 6582 chr2R 7815629 intergenic CG1882 + chr2R 7818920 intergenic not near genes chr2R 7822211 3` UTR cathD - chr2R_41_7815001 chr2R_7815001 RAL-382 934 chr2R 7862231 7862249 chr2R 7867368 7867371 flea 10 5135 17.5 17.0 17.2 0.5 5140 chr2R 7862231 intron Dgk - chr2R 7864801 intron Dgk - chr2R 7867371 intron Dgk - chr2R_10_7860001 chr2R_7860001 RAL-382 935 chr2R 7869150 7869211 chr2R 7873986 7874045 Doc 16 4831 7.5 9.0 8.2 1.7 4895 chr2R 7869150 intron Dgk - chr2R 7871598 intron Dgk - chr2R 7874045 intron Dgk - chr2R_16_7870001 chr2R_7870001 RAL-382 936 chr2R 7875462 7875518 chr2R 7875616 7875672 25 154 8.0 12.0 10.0 2.3 210 chr2R 7875462 intron Dgk - chr2R 7875567 intron Dgk - chr2R 7875672 intron Dgk - chr2R_25_7875001 chr2R_7875001 RAL-382 937 chr2R 8014383 8014455 chr2R 8014518 8014590 44 134 13.0 9.0 11.0 3.7 207 chr2R 8014383 intergenic not near genes chr2R 8014486 intergenic not near genes chr2R 8014590 intergenic not near genes chr2R_44_8010001 chr2R_8010001 RAL-382 938 chr2R 8015617 8015647 chr2R 8017690 8017720 8 2072 17.0 9.0 13.0 0.6 2103 chr2R 8015617 intergenic mir-4981 + chr2R 8016668 intergenic not near genes chr2R 8017720 intergenic not near genes chr2R_8_8015001 chr2R_8015001 RAL-382 939 chr2R 8015648 8015674 chr2R 8017671 8017733 8 2047 10.0 4.0 7.0 1.0 2085 chr2R 8015648 intergenic mir-4981 + chr2R 8016690 intergenic not near genes chr2R 8017733 intergenic not near genes chr2R_8_8015001 chr2R_8015001 RAL-382 940 chr2R 8026761 8026837 chr2R 8026887 8026963 43 126 9.0 13.0 11.0 3.6 202 chr2R 8026761 intergenic CR45267 + chr2R 8026862 intergenic CR45267 + chr2R 8026963 intergenic CR45267 + chr2R_43_8025001 chr2R_8025001 RAL-382 941 chr2R 8040993 8041041 chr2R 8041133 8041181 14 140 6.0 1.5 3.8 2.9 188 chr2R 8040993 intron Optix + chr2R 8041087 intron Optix + chr2R 8041181 intron Optix + chr2R_14_8040001 chr2R_8040001 RAL-382 942 chr2R 8067016 8067090 chr2R 8067150 8067224 37 132 12.0 8.5 10.2 3.3 208 chr2R 8067016 intron CG17977 - chr2R 8067120 intron CG17977 - chr2R 8067224 exon CG17977 - chr2R_37_8065001 chr2R_8065001 RAL-382 943 chr2R 8089205 8089282 chr2R 8089341 8089418 32 136 9.5 9.5 9.5 3.0 213 chr2R 8089205 exon sut2 + chr2R 8089312 intergenic sut2 +,sut3 + chr2R 8089418 intergenic sut3 +,sut2 + chr2R_32_8085001 chr2R_8085001 RAL-382 944 chr2R 8105904 8105957 chr2R 8106027 8106098 27 136 4.0 8.5 6.2 3.8 194 chr2R 8105904 5` UTR Cul4 - chr2R 8106001 intron Cul4 - chr2R 8106098 5` UTR Cul4 - chr2R_27_8105001 chr2R_8105001 RAL-382 945 chr2R 8155536 8155603 chr2R 8155674 8155742 24 137 11.5 2.5 7.0 3.0 206 chr2R 8155536 intron,intron Lpin -,kermit - chr2R 8155639 intron,intron Lpin -,kermit - chr2R 8155742 intron,intron Lpin -,kermit - chr2R_24_8155001 chr2R_8155001 RAL-382 946 chr2R 8157869 8157902 chr2R 8157997 8158018 11 132 5.0 8.5 6.8 1.4 149 chr2R 8157869 5` UTR CR44068 + chr2R 8157944 5` UTR CR44068 + chr2R 8158018 5` UTR CR44068 + chr2R_11_8155001 chr2R_8155001 RAL-382 947 chr2R 8160884 8160949 chr2R 8161024 8161029 15 134 5.0 12.5 8.8 1.5 145 chr2R 8160884 exon CG8708 - chr2R 8160956 intron CG8708 - chr2R 8161029 intron CG8708 - chr2R_15_8160001 chr2R_8160001 RAL-382 948 chr2R 8235988 8236029 chr2R 8236119 8236159 10 130 10.5 8.5 9.5 1.0 171 chr2R 8235988 intergenic not near genes chr2R 8236074 intergenic not near genes chr2R 8236159 intergenic not near genes chr2R_10_8235001 chr2R_8235001 RAL-382 949 chr2R 8277590 8277665 chr2R 8277735 8277794 27 130 3.5 4.0 3.8 5.6 204 chr2R 8277590 5` UTR CR44280 + chr2R 8277692 5` UTR CR44280 + chr2R 8277794 5` UTR CR44280 + chr2R_27_8275001 chr2R_8275001 RAL-382 950 chr2R 8307432 8307451 chr2R 8307560 8307579 9 128 11.5 0.0 5.8 1.3 147 chr2R 8307432 intergenic not near genes chr2R 8307506 intergenic not near genes chr2R 8307579 intergenic not near genes chr2R_9_8305001 chr2R_8305001 RAL-382 951 chr2R 8330822 8330888 chr2R 8331358 8331424 roo 26 536 8.5 9.0 8.8 2.7 602 chr2R 8330822 intron pdm3 + chr2R 8331123 intron pdm3 + chr2R 8331424 intron pdm3 + chr2R_26_8330001 chr2R_8330001 RAL-382 952 chr2R 8368155 8368208 chr2R 8368285 8368338 17 130 9.5 11.0 10.2 1.5 183 chr2R 8368155 intron pdm3 + chr2R 8368246 intron pdm3 + chr2R 8368338 intron pdm3 + chr2R_17_8365001 chr2R_8365001 RAL-382 953 chr2R 8398164 8398240 chr2R 8402995 8403071 Doc 25 4828 6.0 7.5 6.8 3.2 4907 chr2R 8398164 intron CG2121 - chr2R 8400618 intron CG2121 - chr2R 8403071 intron CG2121 - chr2R_25_8400001 chr2R_8400001 RAL-382 954 chr2R 8483919 8483988 chr2R 8484045 8484096 7 121 10.0 8.5 9.2 0.7 177 chr2R 8483919 intron mtt - chr2R 8484008 intron mtt - chr2R 8484096 intron mtt - chr2R_7_8480001 chr2R_8480001 RAL-382 955 chr2R 8489939 8489968 chr2R 8490075 8490104 14 136 1.5 9.0 5.2 2.3 165 chr2R 8489939 intron mtt - chr2R 8490022 intron mtt - chr2R 8490104 intron mtt - chr2R_14_8490001 chr2R_8490001 RAL-382 956 chr2R 8490569 8490574 chr2R 8492338 8492349 Rt1c 6 1772 13.5 21.5 17.5 0.3 1780 chr2R 8490569 intron mtt - chr2R 8491459 intron mtt - chr2R 8492349 intron mtt - chr2R_6_8490001 chr2R_8490001 RAL-382 957 chr2R 8512733 8512790 chr2R 8512843 8512886 22 119 5.0 3.5 4.2 4.2 153 chr2R 8512733 intron mtt - chr2R 8512810 intron mtt - chr2R 8512886 intron mtt - chr2R_22_8510001 chr2R_8510001 RAL-382 958 chr2R 8517661 8517734 chr2R 8517813 8517886 26 152 9.0 10.0 9.5 2.5 225 chr2R 8517661 intron mtt - chr2R 8517774 intron mtt - chr2R 8517886 intron mtt - chr2R_26_8515001 chr2R_8515001 RAL-382 959 chr2R 8524903 8524932 chr2R 8525092 8525106 6 186 16.0 6.5 11.2 0.5 203 chr2R 8524903 intron mtt - chr2R 8525004 intron mtt - chr2R 8525106 intron mtt - chr2R_6_8525001 chr2R_8525001 RAL-382 960 chr2R 8524933 8524967 chr2R 8525091 8525156 14 186 9.5 6.5 8.0 1.6 223 chr2R 8524933 intron mtt - chr2R 8525044 intron mtt - chr2R 8525156 intron mtt - chr2R_14_8525001 chr2R_8525001 RAL-382 961 chr2R 8612542 8612546 chr2R 8612669 8612673 4 127 29.0 11.0 20.0 0.2 131 chr2R 8612542 intron CG8642 - chr2R 8612608 intron CG8642 - chr2R 8612673 intron CG8642 - chr2R_4_8610001 chr2R_8610001 RAL-382 962 chr2R 8612547 8612608 chr2R 8612659 8612735 35 126 11.0 9.0 10.0 3.2 188 chr2R 8612547 intron CG8642 - chr2R 8612641 intron CG8642 - chr2R 8612735 intron CG8642 - chr2R_35_8610001 chr2R_8610001 RAL-382 963 chr2R 8635908 8635932 chr2R 8636036 8636060 4 128 0.0 14.5 7.2 0.5 152 chr2R 8635908 intergenic not near genes chr2R 8635984 intergenic not near genes chr2R 8636060 intergenic not near genes chr2R_4_8635001 chr2R_8635001 RAL-382 964 chr2R 8648954 8649007 chr2R 8649102 8649155 21 146 7.5 7.0 7.2 2.6 201 chr2R 8648954 intergenic not near genes chr2R 8649054 intergenic not near genes chr2R 8649155 intergenic ptc + chr2R_21_8645001 chr2R_8645001 RAL-382 965 chr2R 8649009 8649022 chr2R 8649096 8649170 9 134 6.5 6.0 6.2 1.2 161 chr2R 8649009 intergenic not near genes chr2R 8649090 intergenic not near genes chr2R 8649170 intergenic ptc + chr2R_9_8645001 chr2R_8645001 RAL-382 966 chr2R 8714707 8714722 chr2R 8714844 8714844 4 133 1.0 21.5 11.2 0.3 137 chr2R 8714707 3` UTR PGRP-SC1b + chr2R 8714776 3` UTR PGRP-SC1b + chr2R 8714844 3` UTR PGRP-SC1b + chr2R_4_8710001 chr2R_8710001 RAL-382 967 chr2R 8722720 8722795 chr2R 8723010 8723049 pogo 29 286 7.5 4.0 5.8 4.3 329 chr2R 8722720 intron CG14767 - chr2R 8722884 intron CG14767 - chr2R 8723049 intron CG14767 - chr2R_29_8720001 chr2R_8720001 RAL-382 968 chr2R 8759712 8759788 chr2R 8759841 8759917 35 124 7.5 7.0 7.2 4.3 205 chr2R 8759712 intergenic CG8740 + chr2R 8759814 intergenic CG8740 + chr2R 8759917 intergenic CG8740 + chr2R_35_8755001 chr2R_8755001 RAL-382 969 chr2R 8777875 8777944 chr2R 8784129 8784198 diver 22 6252 5.5 10.0 7.8 2.5 6323 chr2R 8777875 intergenic not near genes chr2R 8781036 intergenic not near genes chr2R 8784198 intergenic not near genes chr2R_22_8780001 chr2R_8780001 RAL-382 970 chr2R 8833388 8833390 chr2R 8833515 8833522 5 130 24.0 6.0 15.0 0.3 134 chr2R 8833388 intron sns + chr2R 8833455 intron sns + chr2R 8833522 intron sns + chr2R_5_8830001 chr2R_8830001 RAL-382 971 chr2R 8833391 8833444 chr2R 8833509 8833576 18 128 10.0 5.5 7.8 2.0 185 chr2R 8833391 intron sns + chr2R 8833484 intron sns + chr2R 8833576 intron sns + chr2R_18_8830001 chr2R_8830001 RAL-382 972 chr2R 8964518 8964570 chr2R 8964940 8964991 21 422 5.5 7.5 6.5 2.8 473 chr2R 8964518 intron CG8216 - chr2R 8964754 intron CG8216 - chr2R 8964991 intron CG8216 - chr2R_21_8960001 chr2R_8960001 RAL-382 973 chr2R 8967417 8967686 chr2R 8967614 8967853 29 187 14.5 15.5 15.0 1.8 436 chr2R 8967417 intron CG8216 - chr2R 8967635 intron CG8216 - chr2R 8967853 intron CG8216 - chr2R_29_8965001 chr2R_8965001 RAL-382 974 chr2R 8976565 8976629 chr2R 8976694 8976758 22 125 10.0 9.5 9.8 2.0 193 chr2R 8976565 intron CG8213 - chr2R 8976662 intron CG8213 - chr2R 8976758 intron CG8213 - chr2R_22_8975001 chr2R_8975001 RAL-382 975 chr2R 8976631 8976639 chr2R 8976690 8976753 5 93 8.0 8.0 8.0 0.6 122 chr2R 8976631 intron CG8213 - chr2R 8976692 intron CG8213 - chr2R 8976753 intron CG8213 - chr2R_5_8975001 chr2R_8975001 RAL-382 976 chr2R 9055748 9055768 chr2R 9055878 9055898 6 127 20.5 12.0 16.2 0.3 150 chr2R 9055748 intron CG13743 - chr2R 9055823 intron CG13743 - chr2R 9055898 intron CG13743 - chr2R_6_9055001 chr2R_9055001 RAL-382 977 chr2R 9055773 9055814 chr2R 9055875 9055944 17 125 13.5 10.5 12.0 1.3 171 chr2R 9055773 intron CG13743 - chr2R 9055858 intron CG13743 - chr2R 9055944 intron CG13743 - chr2R_17_9055001 chr2R_9055001 RAL-382 978 chr2R 9151264 9151324 chr2R 9157776 9157844 Burdock 27 6519 9.0 11.5 10.2 2.4 6580 chr2R 9151264 exon CG30345 + chr2R 9154554 intergenic not near genes chr2R 9157844 intergenic CG8008 - chr2R_27_9150001 chr2R_9150001 RAL-382 979 chr2R 9212663 9212724 chr2R 9213183 9213203 roo 14 520 7.0 5.0 6.0 2.0 540 chr2R 9212663 intergenic CR45309 + chr2R 9212933 intergenic CR45309 + chr2R 9213203 5` UTR CR45309 + chr2R_14_9210001 chr2R_9210001 RAL-382 980 chr2R 9258379 9258425 chr2R 9258519 9258565 18 140 14.5 9.5 12.0 1.4 186 chr2R 9258379 intron Pkn - chr2R 9258472 intron Pkn - chr2R 9258565 intron Pkn - chr2R_18_9255001 chr2R_9255001 RAL-382 981 chr2R 9265223 9265291 chr2R 9265457 9265525 28 234 11.0 5.0 8.0 3.1 302 chr2R 9265223 intron Pkn - chr2R 9265374 intron Pkn - chr2R 9265525 exon Pkn - chr2R_28_9265001 chr2R_9265001 RAL-382 982 chr2R 9267934 9268137 chr2R 9268070 9268264 36 131 1.5 0.0 0.8 20.0 330 chr2R 9267934 exon Pkn - chr2R 9268099 intron Pkn - chr2R 9268264 intron Pkn - chr2R_36_9265001 chr2R_9265001 RAL-382 983 chr2R 9327100 9327151 chr2R 9327271 9327325 11 171 0.0 8.5 4.2 2.1 225 chr2R 9327100 intron,intron CG13739 -,CG13954 - chr2R 9327212 intron,intron CG13739 -,CG13954 - chr2R 9327325 intron,intron CG13739 -,CG13954 - chr2R_11_9325001 chr2R_9325001 RAL-382 984 chr2R 9344331 9344406 chr2R 9344471 9344533 25 136 5.0 0.0 2.5 7.1 202 chr2R 9344331 intron,intron CG13739 -,CG13954 - chr2R 9344432 intron,intron CG13739 -,CG13954 - chr2R 9344533 intron,intron CG13739 -,CG13954 - chr2R_25_9340001 chr2R_9340001 RAL-382 985 chr2R 9368101 9368135 chr2R 9368202 9368206 8 106 4.5 0.0 2.2 2.5 105 chr2R 9368101 intron CG13954 - chr2R 9368154 intron CG13954 - chr2R 9368206 intron CG13954 - chr2R_8_9365001 chr2R_9365001 RAL-382 986 chr2R 9389108 9389180 chr2R 9389240 9389312 28 128 10.0 5.5 7.8 3.2 204 chr2R 9389108 5` UTR CG13954 - chr2R 9389210 5` UTR CG13954 - chr2R 9389312 5` UTR CG13954 - chr2R_28_9385001 chr2R_9385001 RAL-382 987 chr2R 9412041 9412048 chr2R 9412197 9412209 6 160 21.0 9.0 15.0 0.4 168 chr2R 9412041 intron wun - chr2R 9412125 intron wun - chr2R 9412209 intron wun - chr2R_6_9410001 chr2R_9410001 RAL-382 988 chr2R 9445488 9445529 chr2R 9445620 9445661 INE-1 8 125 0.0 17.5 8.8 0.8 173 chr2R 9445488 3` UTR CR45321 - chr2R 9445574 3` UTR CR45321 - chr2R 9445661 3` UTR CR45321 - chr2R_8_9445001 chr2R_9445001 RAL-382 989 chr2R 9461197 9461222 chr2R 9461336 9461361 7 139 13.5 9.0 11.2 0.6 164 chr2R 9461197 intron Camta + chr2R 9461279 intron Camta + chr2R 9461361 intron Camta + chr2R_7_9460001 chr2R_9460001 RAL-382 990 chr2R 9461223 9461257 chr2R 9461335 9461395 17 134 6.5 9.0 7.8 1.9 172 chr2R 9461223 intron Camta + chr2R 9461309 intron Camta + chr2R 9461395 intron Camta + chr2R_17_9460001 chr2R_9460001 RAL-382 991 chr2R 9480035 9480075 chr2R 9490616 9490656 roo 19 10580 19.0 1.0 10.0 1.7 10621 chr2R 9480035 intergenic not near genes chr2R 9485346 intergenic not near genes chr2R 9490656 intergenic not near genes chr2R_19_9485001 chr2R_9485001 RAL-382 992 chr2R 9490624 9490656 chr2R 9490754 9490786 19 128 0.0 15.0 7.5 2.2 162 chr2R 9490624 intergenic not near genes chr2R 9490705 intergenic not near genes chr2R 9490786 intergenic not near genes chr2R_19_9490001 chr2R_9490001 RAL-382 993 chr2R 9510618 9510696 chr2R 9510784 9510862 14 163 3.5 2.5 3.0 3.5 244 chr2R 9510618 exon brp + chr2R 9510740 intron brp + chr2R 9510862 exon brp + chr2R_14_9510001 chr2R_9510001 RAL-382 994 chr2R 9538668 9538743 chr2R 9538802 9538851 28 131 5.0 13.0 9.0 2.8 183 chr2R 9538668 3` UTR brp + chr2R 9538760 3` UTR brp + chr2R 9538851 3` UTR brp + chr2R_28_9535001 chr2R_9535001 RAL-382 995 chr2R 9540262 9540306 chr2R 9540388 9540433 9 127 8.0 12.5 10.2 0.8 171 chr2R 9540262 3` UTR brp + chr2R 9540348 3` UTR brp + chr2R 9540433 3` UTR brp + chr2R_9_9540001 chr2R_9540001 RAL-382 996 chr2R 9541573 9541645 chr2R 9541700 9541772 24 125 10.0 7.5 8.8 2.4 199 chr2R 9541573 intergenic brp +,CG1888 - chr2R 9541672 intergenic brp +,CG1888 - chr2R 9541772 intergenic CG1888 -,brp + chr2R_24_9540001 chr2R_9540001 RAL-382 997 chr2R 9561792 9561839 chr2R 9561927 9561976 13 137 5.0 12.5 8.8 1.3 184 chr2R 9561792 3` UTR,intron CR45281 -,CG1809 + chr2R 9561884 3` UTR,intron CR45281 -,CG1809 + chr2R 9561976 3` UTR,intron CR45281 -,CG1809 + chr2R_13_9560001 chr2R_9560001 RAL-382 998 chr2R 9658668 9658686 chr2R 9659000 9659017 12 330 15.5 0.5 8.0 1.3 349 chr2R 9658668 intron Mmp2 - chr2R 9658842 intron Mmp2 - chr2R 9659017 intron Mmp2 - chr2R_12_9655001 chr2R_9655001 RAL-382 999 chr2R 9669091 9669127 chr2R 9669242 9669278 18 150 16.0 12.0 14.0 1.2 187 chr2R 9669091 intron Mmp2 - chr2R 9669184 intron Mmp2 - chr2R 9669278 intron Mmp2 - chr2R_18_9665001 chr2R_9665001 RAL-382 1000 chr2R 9669128 9669166 chr2R 9669236 9669306 15 141 9.5 10.5 10.0 1.4 178 chr2R 9669128 intron Mmp2 - chr2R 9669217 intron Mmp2 - chr2R 9669306 intron Mmp2 - chr2R_15_9665001 chr2R_9665001 RAL-382 1001 chr2R 9672010 9672075 chr2R 9672166 9672229 16 156 6.5 9.0 7.8 1.8 219 chr2R 9672010 intron Mmp2 - chr2R 9672120 intron Mmp2 - chr2R 9672229 intron Mmp2 - chr2R_16_9670001 chr2R_9670001 RAL-382 1002 chr2R 9699364 9699402 chr2R 9699499 9699539 15 136 12.0 9.0 10.5 1.3 175 chr2R 9699364 intergenic not near genes chr2R 9699452 intergenic not near genes chr2R 9699539 intergenic not near genes chr2R_15_9695001 chr2R_9695001 RAL-382 1003 chr2R 9699404 9699442 chr2R 9699495 9699513 18 125 6.0 8.0 7.0 2.2 109 chr2R 9699404 intergenic not near genes chr2R 9699458 intergenic not near genes chr2R 9699513 intergenic not near genes chr2R_18_9695001 chr2R_9695001 RAL-382 1004 chr2R 9726575 9726635 chr2R 9734176 9734236 17.6 26 7601 7.5 12.5 10.0 2.4 7661 chr2R 9726575 intron sqa - chr2R 9730406 intron sqa - chr2R 9734236 intron sqa - chr2R_26_9730001 chr2R_9730001 RAL-382 1005 chr2R 9741757 9741791 chr2R 9741884 9741918 10 122 12.0 11.5 11.8 0.8 161 chr2R 9741757 intron sqa - chr2R 9741838 intron sqa - chr2R 9741918 intron sqa - chr2R_10_9740001 chr2R_9740001 RAL-382 1006 chr2R 9759242 9759270 chr2R 9759386 9759414 17 143 4.0 6.0 5.0 2.8 172 chr2R 9759242 intron trpl + chr2R 9759328 intron trpl + chr2R 9759414 intron trpl + chr2R_17_9755001 chr2R_9755001 RAL-382 1007 chr2R 9787959 9788035 chr2R 9788398 9788474 29 435 4.5 5.5 5.0 4.8 515 chr2R 9787959 intron CG1688 - chr2R 9788216 intron CG1688 - chr2R 9788474 intron CG1688 - chr2R_29_9785001 chr2R_9785001 RAL-382 1008 chr2R 9792685 9792742 chr2R 9792898 9792955 30 213 9.0 13.5 11.2 2.5 270 chr2R 9792685 intron CG1688 - chr2R 9792820 intron CG1688 - chr2R 9792955 intron CG1688 - chr2R_30_9790001 chr2R_9790001 RAL-382 1009 chr2R 9805377 9805437 chr2R 9805508 9805568 19 131 4.0 8.0 6.0 2.7 191 chr2R 9805377 intron CG1688 - chr2R 9805472 intron CG1688 - chr2R 9805568 intron CG1688 - chr2R_19_9805001 chr2R_9805001 RAL-382 1010 chr2R 9859208 9859272 chr2R 9861508 9861572 28 2301 72.5 61.5 67.0 0.4 2364 chr2R 9859208 intron CG1516 - chr2R 9860390 intron CG1516 - chr2R 9861572 intergenic CR44293 +,CG1516 - chr2R_28_9860001 chr2R_9860001 RAL-382 1011 chr2R 9870997 9871068 chr2R 9871533 9871604 roo 27 529 12.0 8.0 10.0 2.5 607 chr2R 9870997 intron cbx - chr2R 9871300 intron cbx - chr2R 9871604 intron,5` UTR cbx -,CG18446 + chr2R_27_9870001 chr2R_9870001 RAL-382 1012 chr2R 9896782 9896844 chr2R 9896950 9897022 22 177 8.0 7.5 7.8 2.5 240 chr2R 9896782 exon CG30007 + chr2R 9896902 exon CG30007 + chr2R 9897022 exon CG30007 + chr2R_22_9895001 chr2R_9895001 RAL-382 1013 chr2R 9921156 9921168 chr2R 9921336 9921348 7 180 5.5 14.0 9.8 0.6 192 chr2R 9921156 intron Mef2 - chr2R 9921252 intron Mef2 - chr2R 9921348 intron Mef2 - chr2R_7_9920001 chr2R_9920001 RAL-382 1014 chr2R 9945395 9945463 chr2R 9945641 9945664 BS 26 242 7.5 6.0 6.8 3.3 269 chr2R 9945395 intron Mef2 - chr2R 9945530 intron Mef2 - chr2R 9945664 intron Mef2 - chr2R_26_9945001 chr2R_9945001 RAL-382 1015 chr2R 9947926 9947958 chr2R 9948054 9948086 8 126 6.5 3.0 4.8 1.4 160 chr2R 9947926 intron Mef2 - chr2R 9948006 intron Mef2 - chr2R 9948086 intron Mef2 - chr2R_8_9945001 chr2R_9945001 RAL-382 1016 chr2R 9966467 9966538 chr2R 9966722 9966793 34 254 9.5 15.0 12.2 2.6 326 chr2R 9966467 intergenic not near genes chr2R 9966630 intergenic not near genes chr2R 9966793 intergenic CG12133 + chr2R_34_9965001 chr2R_9965001 RAL-382 1017 chr2R 9998052 9998092 chr2R 9998196 9998236 10 144 4.0 11.0 7.5 1.2 184 chr2R 9998052 intron Pka-R2 - chr2R 9998144 intron Pka-R2 - chr2R 9998236 intron Pka-R2 - chr2R_10_9995001 chr2R_9995001 RAL-382 1018 chr2R 10005510 10005585 chr2R 10005657 10005732 36 147 8.5 5.5 7.0 4.5 222 chr2R 10005510 intron Pka-R2 - chr2R 10005621 intron Pka-R2 - chr2R 10005732 intron Pka-R2 - chr2R_36_10005001 chr2R_10005001 RAL-382 1019 chr2R 10005804 10005878 chr2R 10007018 10007066 1360 24 1208 10.0 6.5 8.2 2.6 1262 chr2R 10005804 intron Pka-R2 - chr2R 10006435 intron Pka-R2 - chr2R 10007066 intron Pka-R2 - chr2R_24_10005001 chr2R_10005001 RAL-382 1020 chr2R 10008585 10008597 chr2R 10008735 10008783 5 175 0.0 0.0 0.0 5.0 198 chr2R 10008585 intron Pka-R2 - chr2R 10008684 intron Pka-R2 - chr2R 10008783 intron Pka-R2 - chr2R_5_10005001 chr2R_10005001 RAL-382 1021 chr2R 10047779 10047822 chr2R 10047912 10047955 18 133 15.5 11.5 13.5 1.2 176 chr2R 10047779 intron oys - chr2R 10047867 intron oys - chr2R 10047955 intron oys - chr2R_18_10045001 chr2R_10045001 RAL-382 1022 chr2R 10122693 10122749 chr2R 10122953 10123009 20 257 11.5 7.5 9.5 1.9 316 chr2R 10122693 intergenic Ccs - chr2R 10122851 intergenic Ccs - chr2R 10123009 intergenic Ccs - chr2R_20_10120001 chr2R_10120001 RAL-382 1023 chr2R 10132148 10132215 chr2R 10132278 10132299 21 128 5.0 9.0 7.0 2.6 151 chr2R 10132148 exon gem + chr2R 10132224 intron gem + chr2R 10132299 intron gem + chr2R_21_10130001 chr2R_10130001 RAL-382 1024 chr2R 10161505 10161576 chr2R 10161651 10161723 18 146 4.5 7.5 6.0 2.6 218 chr2R 10161505 intron KCNQ - chr2R 10161614 intron KCNQ - chr2R 10161723 intron KCNQ - chr2R_18_10160001 chr2R_10160001 RAL-382 1025 chr2R 10168307 10168362 chr2R 10168434 10168466 17 123 9.0 11.5 10.2 1.5 159 chr2R 10168307 intron KCNQ - chr2R 10168386 intron KCNQ - chr2R 10168466 intron KCNQ - chr2R_17_10165001 chr2R_10165001 RAL-382 1026 chr2R 10176837 10176900 chr2R 10186057 10186120 roo 34 9220 8.0 15.5 11.8 2.7 9283 chr2R 10176837 intron KCNQ - chr2R 10181478 intron KCNQ - chr2R 10186120 intron KCNQ - chr2R_34_10180001 chr2R_10180001 RAL-382 1027 chr2R 10189159 10189189 chr2R 10189287 10189317 17 128 18.0 12.5 15.2 1.0 158 chr2R 10189159 intron KCNQ - chr2R 10189238 intron KCNQ - chr2R 10189317 intron KCNQ - chr2R_17_10185001 chr2R_10185001 RAL-382 1028 chr2R 10189194 10189224 chr2R 10189282 10189352 19 124 8.5 11.5 10.0 1.7 158 chr2R 10189194 intron KCNQ - chr2R 10189273 intron KCNQ - chr2R 10189352 intron KCNQ - chr2R_19_10185001 chr2R_10185001 RAL-382 1029 chr2R 10203590 10203659 chr2R 10203725 10203794 32 135 9.5 6.5 8.0 3.6 204 chr2R 10203590 intergenic not near genes chr2R 10203692 intergenic not near genes chr2R 10203794 intergenic not near genes chr2R_32_10200001 chr2R_10200001 RAL-382 1030 chr2R 10216142 10216211 chr2R 10216270 10216324 12 127 9.5 5.0 7.2 1.5 182 chr2R 10216142 intron,intron CG12912 -,Hr46 - chr2R 10216233 intron,intron CG12912 -,Hr46 - chr2R 10216324 intron,intron CG12912 -,Hr46 - chr2R_12_10215001 chr2R_10215001 RAL-382 1031 chr2R 10225717 10225747 chr2R 10225837 10225879 16 131 6.0 12.0 9.0 1.6 162 chr2R 10225717 intron,intron CG12912 -,Hr46 - chr2R 10225798 intron,intron CG12912 -,Hr46 - chr2R 10225879 intron,intron CG12912 -,Hr46 - chr2R_16_10225001 chr2R_10225001 RAL-382 1032 chr2R 10266483 10266519 chr2R 10266588 10266660 8 112 6.5 3.5 5.0 1.3 177 chr2R 10266483 intron CG12910 + chr2R 10266572 intron CG12910 + chr2R 10266660 intron CG12910 + chr2R_8_10265001 chr2R_10265001 RAL-382 1033 chr2R 10274771 10274809 chr2R 10274897 10274935 15 126 18.0 0.5 9.2 1.5 164 chr2R 10274771 intron CAP + chr2R 10274853 intron CAP + chr2R 10274935 intron CAP + chr2R_15_10270001 chr2R_10270001 RAL-382 1034 chr2R 10290080 10290140 chr2R 10290211 10290271 36 131 10.5 8.0 9.2 3.5 191 chr2R 10290080 intron CAP + chr2R 10290176 intron CAP + chr2R 10290271 intron CAP + chr2R_36_10290001 chr2R_10290001 RAL-382 1035 chr2R 10313297 10313350 chr2R 10313431 10313488 20 138 2.5 3.5 3.0 5.0 191 chr2R 10313297 intergenic not near genes chr2R 10313392 intergenic Ndg + chr2R 10313488 intergenic Ndg + chr2R_20_10310001 chr2R_10310001 RAL-382 1036 chr2R 10322026 10322079 chr2R 10322158 10322211 20 132 7.5 8.5 8.0 2.2 185 chr2R 10322026 3` UTR Ndg + chr2R 10322118 intergenic Ndg + chr2R 10322211 intergenic Ndg + chr2R_20_10320001 chr2R_10320001 RAL-382 1037 chr2R 10352628 10352695 chr2R 10352755 10352822 24 125 10.0 11.0 10.5 2.1 194 chr2R 10352628 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352725 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352822 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_24_10350001 chr2R_10350001 RAL-382 1038 chr2R 10387979 10388000 chr2R 10388110 10388142 7 143 0.0 10.0 5.0 1.2 163 chr2R 10387979 intron CG42732 - chr2R 10388060 intron CG42732 - chr2R 10388142 intron CG42732 - chr2R_7_10385001 chr2R_10385001 RAL-382 1039 chr2R 10411762 10411829 chr2R 10411894 10411961 25 132 8.5 12.5 10.5 2.2 199 chr2R 10411762 intron CG42732 - chr2R 10411862 intron CG42732 - chr2R 10411961 intron CG42732 - chr2R_25_10410001 chr2R_10410001 RAL-382 1040 chr2R 10428976 10429033 chr2R 10429103 10429146 22 125 2.5 5.5 4.0 4.4 170 chr2R 10428976 intergenic not near genes chr2R 10429061 intergenic not near genes chr2R 10429146 intergenic not near genes chr2R_22_10425001 chr2R_10425001 RAL-382 1041 chr2R 10562945 10563203 chr2R 10563067 10563351 14 130 0.0 0.0 0.0 14.0 406 chr2R 10562945 intron psq + chr2R 10563148 intron psq + chr2R 10563351 intron psq + chr2R_14_10560001 chr2R_10560001 RAL-382 1042 chr2R 10563229 10563521 chr2R 10563377 10563651 14 142 16.0 14.0 15.0 0.9 422 chr2R 10563229 intron psq + chr2R 10563440 intron psq + chr2R 10563651 intron psq + chr2R_14_10560001 chr2R_10560001 RAL-382 1043 chr2R 10563537 10563554 chr2R 10563637 10563684 9 125 11.5 10.5 11.0 0.8 147 chr2R 10563537 intron psq + chr2R 10563610 intron psq + chr2R 10563684 intron psq + chr2R_9_10560001 chr2R_10560001 RAL-382 1044 chr2R 10563557 10563580 chr2R 10563636 10563700 11 112 6.5 10.5 8.5 1.2 143 chr2R 10563557 intron psq + chr2R 10563628 intron psq + chr2R 10563700 intron psq + chr2R_11_10560001 chr2R_10560001 RAL-382 1045 chr2R 10563905 10563910 chr2R 10564146 10564151 5 241 0.0 12.0 6.0 0.7 246 chr2R 10563905 intron psq + chr2R 10564028 intron psq + chr2R 10564151 intron psq + chr2R_5_10560001 chr2R_10560001 RAL-382 1046 chr2R 10574589 10574629 chr2R 10574721 10574761 9 132 16.0 15.0 15.5 0.5 172 chr2R 10574589 intron psq + chr2R 10574675 intron psq + chr2R 10574761 intron psq + chr2R_9_10570001 chr2R_10570001 RAL-382 1047 chr2R 10577418 10577494 chr2R 10577553 10577629 23 135 6.0 8.0 7.0 2.9 211 chr2R 10577418 intron psq + chr2R 10577524 intron psq + chr2R 10577629 intron psq + chr2R_23_10575001 chr2R_10575001 RAL-382 1048 chr2R 10582071 10582101 chr2R 10582216 10582246 9 145 11.5 0.0 5.8 1.3 175 chr2R 10582071 intron psq + chr2R 10582158 intron psq + chr2R 10582246 intron psq + chr2R_9_10580001 chr2R_10580001 RAL-382 1049 chr2R 10622302 10622331 chr2R 10637117 10637146 mdg1 15 14815 19.0 10.0 14.5 1.0 14844 chr2R 10622302 intron CG11883 + chr2R 10629724 intron CG11883 + chr2R 10637146 intron CG11883 + chr2R_15_10625001 chr2R_10625001 RAL-382 1050 chr2R 10644012 10644061 chr2R 10644140 10644189 19 128 9.0 0.5 4.8 3.3 177 chr2R 10644012 intron Git - chr2R 10644100 intron Git - chr2R 10644189 intron Git - chr2R_19_10640001 chr2R_10640001 RAL-382 1051 chr2R 10678445 10678518 chr2R 10678601 10678662 24 144 9.0 6.0 7.5 2.8 217 chr2R 10678445 intron stan + chr2R 10678554 intron stan + chr2R 10678662 intron stan + chr2R_24_10675001 chr2R_10675001 RAL-382 1052 chr2R 10761510 10761581 chr2R 10761714 10761785 40 201 11.5 7.5 9.5 3.8 275 chr2R 10761510 intron,5` UTR CG33144 -,CR43605 + chr2R 10761648 intron,5` UTR CG33144 -,CR43605 + chr2R 10761785 intron CG33144 - chr2R_40_10760001 chr2R_10760001 RAL-382 1053 chr2R 10770950 10771021 chr2R 10771081 10771152 23 130 4.5 14.0 9.2 2.3 202 chr2R 10770950 intron CG33144 - chr2R 10771051 intron CG33144 - chr2R 10771152 intron CG33144 - chr2R_23_10770001 chr2R_10770001 RAL-382 1054 chr2R 10794865 10794928 chr2R 10794993 10795056 25 128 12.0 5.5 8.8 2.6 191 chr2R 10794865 intron CG33144 - chr2R 10794960 intron CG33144 - chr2R 10795056 intron CG33144 - chr2R_25_10790001 chr2R_10790001 RAL-382 1055 chr2R 10796656 10796737 chr2R 10796805 10796886 19 143 3.5 9.0 6.2 2.6 230 chr2R 10796656 intron CG33144 - chr2R 10796771 intron CG33144 - chr2R 10796886 intron CG33144 - chr2R_19_10795001 chr2R_10795001 RAL-382 1056 chr2R 10827283 10827357 chr2R 10827420 10827495 44 136 7.0 9.5 8.2 4.8 212 chr2R 10827283 exon CG12325 + chr2R 10827389 3` UTR CG12325 + chr2R 10827495 3` UTR,3` UTR CG12325 +,CG12344 - chr2R_44_10825001 chr2R_10825001 RAL-382 1057 chr2R 10848272 10848314 chr2R 10848425 10848465 11 153 9.5 10.5 10.0 1.0 193 chr2R 10848272 intron CG30015 - chr2R 10848368 intron CG30015 - chr2R 10848465 exon CG30015 - chr2R_11_10845001 chr2R_10845001 RAL-382 1058 chr2R 10888998 10889024 chr2R 10889131 10889157 8 133 7.0 15.5 11.2 0.7 159 chr2R 10888998 intron CG30020 + chr2R 10889078 intron CG30020 + chr2R 10889157 intron CG30020 + chr2R_8_10885001 chr2R_10885001 RAL-382 1059 chr2R 10948016 10948047 chr2R 10955617 10955648 17.6 11 7599 2.5 17.0 9.8 1.0 7632 chr2R 10948016 intergenic not near genes chr2R 10951832 intergenic not near genes chr2R 10955648 intergenic not near genes chr2R_11_10950001 chr2R_10950001 RAL-382 1060 chr2R 10959040 10959112 chr2R 10959169 10959241 21 128 0.5 7.0 3.8 4.4 201 chr2R 10959040 intergenic not near genes chr2R 10959140 intergenic not near genes chr2R 10959241 intergenic not near genes chr2R_21_10955001 chr2R_10955001 RAL-382 1061 chr2R 10979617 10979677 chr2R 10980135 10980195 297 17 515 6.5 7.5 7.0 2.1 578 chr2R 10979617 intergenic not near genes chr2R 10979906 intergenic not near genes chr2R 10980195 intergenic not near genes chr2R_17_10975001 chr2R_10975001 RAL-382 1062 chr2R 11009775 11009794 chr2R 11018998 11019015 roo 15 9224 19.5 9.5 14.5 1.0 9240 chr2R 11009775 intron luna - chr2R 11014395 intron luna - chr2R 11019015 intron luna - chr2R_15_11010001 chr2R_11010001 RAL-382 1063 chr2R 11009796 11009843 chr2R 11018996 11019057 roo 15 9217 8.5 9.0 8.8 1.5 9261 chr2R 11009796 intron luna - chr2R 11014426 intron luna - chr2R 11019057 intron luna - chr2R_15_11010001 chr2R_11010001 RAL-382 1064 chr2R 11019835 11019901 chr2R 11024951 11024997 jockey 18 5113 4.5 4.5 4.5 3.3 5162 chr2R 11019835 intron luna - chr2R 11022416 intron luna - chr2R 11024997 intron luna - chr2R_18_11020001 chr2R_11020001 RAL-382 1065 chr2R 11032597 11032665 chr2R 11032741 11032809 25 139 10.5 7.5 9.0 2.5 212 chr2R 11032597 intron luna - chr2R 11032703 intron luna - chr2R 11032809 intron luna - chr2R_25_11030001 chr2R_11030001 RAL-382 1066 chr2R 11034239 11034310 chr2R 11034497 11034568 15 254 6.5 6.5 6.5 2.0 329 chr2R 11034239 intron luna - chr2R 11034404 intron luna - chr2R 11034568 intron luna - chr2R_15_11030001 chr2R_11030001 RAL-382 1067 chr2R 11057784 11057826 chr2R 11058022 11058100 12 258 4.0 3.5 3.8 2.5 316 chr2R 11057784 intron luna - chr2R 11057942 intron luna - chr2R 11058100 intron luna - chr2R_12_11055001 chr2R_11055001 RAL-382 1068 chr2R 11063938 11064016 chr2R 11064270 11064337 12 327 3.5 2.0 2.8 3.2 399 chr2R 11063938 intron luna - chr2R 11064138 intron luna - chr2R 11064337 intron luna - chr2R_12_11060001 chr2R_11060001 RAL-382 1069 chr2R 11064671 11064731 chr2R 11064798 11064864 27 131 0.5 6.5 3.5 6.0 193 chr2R 11064671 intron luna - chr2R 11064768 intron luna - chr2R 11064864 intron luna - chr2R_27_11060001 chr2R_11060001 RAL-382 1070 chr2R 11097688 11097754 chr2R 11097829 11097895 27 138 7.5 6.5 7.0 3.4 207 chr2R 11097688 intron luna - chr2R 11097792 intron luna - chr2R 11097895 intron luna - chr2R_27_11095001 chr2R_11095001 RAL-382 1071 chr2R 11110386 11110421 chr2R 11110512 11110547 16 126 5.0 18.5 11.8 1.2 161 chr2R 11110386 intron luna - chr2R 11110466 intron luna - chr2R 11110547 intron luna - chr2R_16_11110001 chr2R_11110001 RAL-382 1072 chr2R 11179222 11179281 chr2R 11179358 11179416 14 135 7.5 7.5 7.5 1.6 194 chr2R 11179222 intron shn + chr2R 11179319 intron shn + chr2R 11179416 intron shn + chr2R_14_11175001 chr2R_11175001 RAL-382 1073 chr2R 11207786 11207831 chr2R 11208029 11208074 BS 21 241 12.0 14.5 13.2 1.5 288 chr2R 11207786 intron shn + chr2R 11207930 intron shn + chr2R 11208074 intron shn + chr2R_21_11205001 chr2R_11205001 RAL-382 1074 chr2R 11292926 11293001 chr2R 11293052 11293148 21 143 2.5 0.0 1.2 9.5 222 chr2R 11292926 exon,3` UTR dare -,CG30033 + chr2R 11293037 5` UTR,3` UTR dare -,CG30033 + chr2R 11293148 5` UTR,3` UTR dare -,CG30033 + chr2R_21_11290001 chr2R_11290001 RAL-382 1075 chr2R 11297589 11297636 chr2R 11301963 11302010 flea 23 4373 3.5 4.0 3.8 4.8 4421 chr2R 11297589 intergenic CG42336 - chr2R 11299800 intergenic not near genes chr2R 11302010 5` UTR CG7741 + chr2R_23_11295001 chr2R_11295001 RAL-382 1076 chr2R 11344113 11344159 chr2R 11344259 11344305 13 145 0.0 8.0 4.0 2.6 192 chr2R 11344113 intergenic alphaTry - chr2R 11344209 intergenic alphaTry - chr2R 11344305 3` UTR alphaTry - chr2R_13_11340001 chr2R_11340001 RAL-382 1077 chr2R 11367979 11368056 chr2R 11368105 11368182 27 126 12.5 13.0 12.8 2.0 203 chr2R 11367979 intron CG13204 + chr2R 11368080 intron CG13204 + chr2R 11368182 intron CG13204 + chr2R_27_11365001 chr2R_11365001 RAL-382 1078 chr2R 11377218 11377286 chr2R 11377346 11377410 21 128 2.5 11.5 7.0 2.6 192 chr2R 11377218 3` UTR Tsp47F - chr2R 11377314 3` UTR Tsp47F - chr2R 11377410 3` UTR Tsp47F - chr2R_21_11375001 chr2R_11375001 RAL-382 1079 chr2R 11415480 11415539 chr2R 11418678 11418738 opus 22 3198 12.5 9.0 10.8 1.9 3258 chr2R 11415480 intron Drip - chr2R 11417109 intron Drip - chr2R 11418738 intron Drip - chr2R_22_11415001 chr2R_11415001 RAL-382 1080 chr2R 11472604 11472680 chr2R 11473851 11473892 pogo 33 1243 5.5 10.5 8.0 3.7 1288 chr2R 11472604 intergenic not near genes chr2R 11473248 intergenic not near genes chr2R 11473892 intergenic not near genes chr2R_33_11470001 chr2R_11470001 RAL-382 1081 chr2R 11480742 11480833 chr2R 11480892 11480965 9 146 0.0 3.5 1.8 3.2 223 chr2R 11480742 intron inv + chr2R 11480854 intron inv + chr2R 11480965 intron inv + chr2R_9_11480001 chr2R_11480001 RAL-382 1082 chr2R 11497598 11497657 chr2R 11497727 11497786 21 129 7.5 9.5 8.5 2.2 188 chr2R 11497598 intron inv + chr2R 11497692 intron inv + chr2R 11497786 intron inv + chr2R_21_11495001 chr2R_11495001 RAL-382 1083 chr2R 11498789 11498806 chr2R 11498962 11498964 6 170 30.0 25.5 27.8 0.2 175 chr2R 11498789 intron inv + chr2R 11498876 intron inv + chr2R 11498964 intron inv + chr2R_6_11495001 chr2R_11495001 RAL-382 1084 chr2R 11555358 11555422 chr2R 11555732 11555807 22 384 2.5 6.5 4.5 4.0 449 chr2R 11555358 intergenic not near genes chr2R 11555582 intergenic not near genes chr2R 11555807 intergenic not near genes chr2R_22_11555001 chr2R_11555001 RAL-382 1085 chr2R 11559537 11559590 chr2R 11559670 11559694 15 136 6.5 6.0 6.2 2.1 157 chr2R 11559537 intergenic not near genes chr2R 11559616 intergenic not near genes chr2R 11559694 intergenic not near genes chr2R_15_11555001 chr2R_11555001 RAL-382 1086 chr2R 11614573 11614798 chr2R 11614711 11614929 43 138 3.5 3.5 3.5 9.6 356 chr2R 11614573 intron tou - chr2R 11614751 intron tou - chr2R 11614929 intron tou - chr2R_43_11610001 chr2R_11610001 RAL-382 1087 chr2R 11625266 11625277 chr2R 11625394 11625405 5 128 9.0 0.0 4.5 0.9 139 chr2R 11625266 5` UTR CG9005 - chr2R 11625336 intron CG9005 - chr2R 11625405 intron CG9005 - chr2R_5_11625001 chr2R_11625001 RAL-382 1088 chr2R 11636367 11636436 chr2R 11636484 11636548 19 124 7.0 10.0 8.5 2.0 181 chr2R 11636367 intron CG9005 - chr2R 11636458 intron CG9005 - chr2R 11636548 intron CG9005 - chr2R_19_11635001 chr2R_11635001 RAL-382 1089 chr2R 11724106 11724185 chr2R 11724241 11724323 17 136 6.5 7.0 6.8 2.2 217 chr2R 11724106 intron pyr + chr2R 11724214 intron pyr + chr2R 11724323 exon pyr + chr2R_17_11720001 chr2R_11720001 RAL-382 1090 chr2R 11772661 11772686 chr2R 11772788 11772813 8 127 9.5 6.0 7.8 0.9 152 chr2R 11772661 intron ths + chr2R 11772737 intron ths + chr2R 11772813 intron ths + chr2R_8_11770001 chr2R_11770001 RAL-382 1091 chr2R 11928660 11928710 chr2R 11928788 11928838 7 127 0.0 14.5 7.2 0.9 178 chr2R 11928660 intergenic not near genes chr2R 11928749 intergenic CR44312 - chr2R 11928838 intergenic CR44312 - chr2R_7_11925001 chr2R_11925001 RAL-382 1092 chr2R 8518786 8518803 chr2R 12066130 12066179 8 3547354 39.5 24.5 32.0 0.2 3547393 chr2R 8518786 intron mtt - chr2R 10292482 intron CAP + chr2R 12066179 intron CG8888 - chr2R_8_10290001 chr2R_10290001 RAL-382 1093 chr2R 12096807 12096851 chr2R 12097288 12097353 13 498 4.0 5.5 4.8 2.2 546 chr2R 12096807 intron jeb - chr2R 12097080 intron jeb - chr2R 12097353 intron jeb - chr2R_13_12095001 chr2R_12095001 RAL-382 1094 chr2R 12185958 12186031 chr2R 12186103 12186176 72 145 18.5 18.5 18.5 3.7 218 chr2R 12185958 intron Cyp6g1 + chr2R 12186067 intron Cyp6g1 + chr2R 12186176 intron Cyp6g1 + chr2R_72_12185001 chr2R_12185001 RAL-382 1095 chr2R 12185222 12185269 chr2R 12188113 12188144 16 2879 32.0 195.5 113.8 0.1 2922 chr2R 12185222 3` UTR,exon CG13175 +,CG33964 + chr2R 12186683 exon Cyp6g1 + chr2R 12188144 3` UTR Cyp6g1 + chr2R_16_12185001 chr2R_12185001 RAL-382 1096 chr2R 12189367 12189409 chr2R 12189599 12189652 15 231 132.0 122.5 127.2 0.1 285 chr2R 12189367 exon Cyp6g2 - chr2R 12189510 exon Cyp6g2 - chr2R 12189652 exon Cyp6g2 - chr2R_15_12185001 chr2R_12185001 RAL-382 1097 chr2R 12187479 12187486 chr2R 12190045 12190052 8 2566 85.5 126.0 105.8 0.1 2573 chr2R 12187479 exon Cyp6g1 + chr2R 12188766 exon Cyp6g2 - chr2R 12190052 exon Cyp6g2 - chr2R_8_12185001 chr2R_12185001 RAL-382 1098 chr2R 12187478 12187501 chr2R 12190054 12190078 20 2570 98.0 117.0 107.5 0.2 2600 chr2R 12187478 exon Cyp6g1 + chr2R 12188778 exon Cyp6g2 - chr2R 12190078 exon Cyp6g2 - chr2R_20_12185001 chr2R_12185001 RAL-382 1099 chr2R 12187475 12187540 chr2R 12190079 12190106 46 2579 121.5 99.5 110.5 0.4 2631 chr2R 12187475 exon Cyp6g1 + chr2R 12188790 exon Cyp6g2 - chr2R 12190106 exon Cyp6g2 - chr2R_46_12185001 chr2R_12185001 RAL-382 1100 chr2R 12187474 12187518 chr2R 12190107 12190122 24 2592 105.0 80.5 92.8 0.3 2648 chr2R 12187474 exon Cyp6g1 + chr2R 12188798 exon Cyp6g2 - chr2R 12190122 exon Cyp6g2 - chr2R_24_12185001 chr2R_12185001 RAL-382 1101 chr2R 12213849 12213861 chr2R 12213978 12213990 7 129 7.0 7.5 7.2 0.9 141 chr2R 12213849 intergenic CG13171 + chr2R 12213920 intergenic CG13171 + chr2R 12213990 intergenic CG13171 + chr2R_7_12210001 chr2R_12210001 RAL-382 1102 chr2R 12235374 12235396 chr2R 12235543 12235566 13 170 16.0 12.5 14.2 0.9 192 chr2R 12235374 intergenic not near genes chr2R 12235470 intergenic not near genes chr2R 12235566 intergenic not near genes chr2R_13_12235001 chr2R_12235001 RAL-382 1103 chr2R 12235398 12235427 chr2R 12235527 12235597 16 167 9.0 9.5 9.2 1.6 199 chr2R 12235398 intergenic not near genes chr2R 12235498 intergenic not near genes chr2R 12235597 intergenic not near genes chr2R_16_12235001 chr2R_12235001 RAL-382 1104 chr2R 12240731 12240776 chr2R 12240857 12240911 7 134 3.5 0.0 1.8 2.5 180 chr2R 12240731 exon CG13170 + chr2R 12240821 intergenic CG13170 +,CG43315 + chr2R 12240911 intergenic CG13170 +,CG43315 + chr2R_7_12240001 chr2R_12240001 RAL-382 1105 chr2R 12272279 12272348 chr2R 12272412 12272481 36 133 7.0 8.5 7.8 4.1 202 chr2R 12272279 intron Cam + chr2R 12272380 intron Cam + chr2R 12272481 intron Cam + chr2R_36_12270001 chr2R_12270001 RAL-382 1106 chr2R 12284266 12284328 chr2R 12284400 12284462 17 131 0.0 8.5 4.2 3.3 196 chr2R 12284266 intron CG42700 + chr2R 12284364 intron CG42700 + chr2R 12284462 intron CG42700 + chr2R_17_12280001 chr2R_12280001 RAL-382 1107 chr2R 12319798 12319799 chr2R 12320909 12320911 5 1111 20.5 40.5 30.5 0.2 1113 chr2R 12319798 intergenic not near genes chr2R 12320354 intergenic CR44316 - chr2R 12320911 3` UTR CR44316 - chr2R_5_12320001 chr2R_12320001 RAL-382 1108 chr2R 12443712 12443742 chr2R 12444070 12444095 8 353 14.0 5.5 9.8 0.7 383 chr2R 12443712 intron Dyb + chr2R 12443904 intron Dyb + chr2R 12444095 intron Dyb + chr2R_8_12440001 chr2R_12440001 RAL-382 1109 chr2R 12443753 12443784 chr2R 12444066 12444141 16 333 6.5 4.0 5.2 2.6 388 chr2R 12443753 intron Dyb + chr2R 12443947 intron Dyb + chr2R 12444141 intron Dyb + chr2R_16_12440001 chr2R_12440001 RAL-382 1110 chr2R 12481146 12481167 chr2R 12482963 12482966 roo 7 1830 5.0 11.0 8.0 0.8 1820 chr2R 12481146 exon Dh44-R2 + chr2R 12482056 intron Dh44-R2 + chr2R 12482966 intron Dh44-R2 + chr2R_7_12480001 chr2R_12480001 RAL-382 1111 chr2R 12501692 12501719 chr2R 12503857 12503892 Rt1c 5 2183 5.0 5.5 5.2 0.8 2200 chr2R 12501692 intron fdl - chr2R 12502792 intron fdl - chr2R 12503892 intron fdl - chr2R_5_12500001 chr2R_12500001 RAL-382 1112 chr2R 12565513 12565596 chr2R 12565943 12565995 19 402 0.0 4.0 2.0 6.3 482 chr2R 12565513 intergenic not near genes chr2R 12565754 intergenic Cyp301a1 + chr2R 12565995 intergenic Cyp301a1 + chr2R_19_12565001 chr2R_12565001 RAL-382 1113 chr2R 12602760 12602834 chr2R 12602894 12602968 42 134 9.0 11.0 10.0 3.8 208 chr2R 12602760 intron Amph + chr2R 12602864 intron Amph + chr2R 12602968 intron Amph + chr2R_42_12600001 chr2R_12600001 RAL-382 1114 chr2R 12625964 12626022 chr2R 12626155 12626213 17 191 0.0 15.0 7.5 2.0 249 chr2R 12625964 5` UTR CG17760 + chr2R 12626088 5` UTR CG17760 + chr2R 12626213 intron CG17760 + chr2R_17_12625001 chr2R_12625001 RAL-382 1115 chr2R 12627420 12627499 chr2R 12627573 12627642 10 148 0.0 7.5 3.8 2.1 222 chr2R 12627420 intron CG17760 + chr2R 12627531 intron CG17760 + chr2R 12627642 exon CG17760 + chr2R_10_12625001 chr2R_12625001 RAL-382 1116 chr2R 12671411 12671413 chr2R 12671562 12671564 4 151 10.0 14.5 12.2 0.3 153 chr2R 12671411 intron CG42708 - chr2R 12671488 intron CG42708 - chr2R 12671564 exon CG42708 - chr2R_4_12670001 chr2R_12670001 RAL-382 1117 chr2R 12696557 12696564 chr2R 12696686 12696693 4 129 8.5 0.0 4.2 0.8 136 chr2R 12696557 intergenic not near genes chr2R 12696625 intergenic not near genes chr2R 12696693 intergenic not near genes chr2R_4_12695001 chr2R_12695001 RAL-382 1118 chr2R 12702275 12702319 chr2R 12702406 12702451 12 131 12.0 3.5 7.8 1.4 176 chr2R 12702275 intergenic not near genes chr2R 12702363 intergenic not near genes chr2R 12702451 intergenic not near genes chr2R_12_12700001 chr2R_12700001 RAL-382 1119 chr2R 12702322 12702344 chr2R 12702403 12702476 9 126 7.5 4.0 5.8 1.3 154 chr2R 12702322 intergenic not near genes chr2R 12702399 intergenic not near genes chr2R 12702476 intergenic not near genes chr2R_9_12700001 chr2R_12700001 RAL-382 1120 chr2R 12707467 12707546 chr2R 12715883 12715962 roo 34 8416 4.5 4.5 4.5 6.2 8495 chr2R 12707467 intron CG42663 + chr2R 12711714 intron CG42663 + chr2R 12715962 intron CG42663 + chr2R_34_12710001 chr2R_12710001 RAL-382 1121 chr2R 12766380 12766422 chr2R 12766519 12766561 16 138 5.5 0.0 2.8 4.2 181 chr2R 12766380 intergenic not near genes chr2R 12766470 intergenic not near genes chr2R 12766561 intergenic not near genes chr2R_16_12765001 chr2R_12765001 RAL-382 1122 chr2R 12777751 12777825 chr2R 12777906 12777984 18 156 1.0 8.0 4.5 3.3 233 chr2R 12777751 5` UTR CR45266 + chr2R 12777868 5` UTR CR45266 + chr2R 12777984 5` UTR CR45266 + chr2R_18_12775001 chr2R_12775001 RAL-382 1123 chr2R 12789254 12789265 chr2R 12797667 12797673 roo 7 8412 20.5 4.5 12.5 0.5 8419 chr2R 12789254 intron,3` UTR sca +,CR45137 - chr2R 12793464 intron,intron sca +,CR45137 - chr2R 12797673 intron,3` UTR sca +,CR45137 - chr2R_7_12790001 chr2R_12790001 RAL-382 1124 chr2R 12789266 12789327 chr2R 12797659 12797692 roo 19 8398 9.0 4.5 6.8 2.4 8426 chr2R 12789266 intron,3` UTR sca +,CR45137 - chr2R 12793479 intron,intron sca +,CR45137 - chr2R 12797692 intron,3` UTR sca +,CR45137 - chr2R_19_12790001 chr2R_12790001 RAL-382 1125 chr2R 12798605 12798613 chr2R 12798905 12798913 5 300 7.5 12.5 10.0 0.5 308 chr2R 12798605 intron,3` UTR sca +,CR45137 - chr2R 12798759 intron,3` UTR sca +,CR45137 - chr2R 12798913 intron,3` UTR sca +,CR45137 - chr2R_5_12795001 chr2R_12795001 RAL-382 1126 chr2R 12798622 12798630 chr2R 12798901 12798930 4 289 5.5 12.5 9.0 0.4 308 chr2R 12798622 intron,3` UTR sca +,CR45137 - chr2R 12798776 intron,3` UTR sca +,CR45137 - chr2R 12798930 intron,3` UTR sca +,CR45137 - chr2R_4_12795001 chr2R_12795001 RAL-382 1127 chr2R 12819404 12819413 chr2R 12824523 12824532 jockey 5 5118 18.0 3.5 10.8 0.4 5128 chr2R 12819404 intergenic not near genes chr2R 12821968 intergenic not near genes chr2R 12824532 intergenic not near genes chr2R_5_12820001 chr2R_12820001 RAL-382 1128 chr2R 12819415 12819474 chr2R 12824522 12824592 jockey 29 5116 7.5 3.5 5.5 4.5 5177 chr2R 12819415 intergenic not near genes chr2R 12822004 intergenic not near genes chr2R 12824592 intergenic not near genes chr2R_29_12820001 chr2R_12820001 RAL-382 1129 chr2R 12834113 12834179 chr2R 12834246 12834312 32 133 13.0 10.0 11.5 2.6 199 chr2R 12834113 intergenic not near genes chr2R 12834212 intergenic not near genes chr2R 12834312 intergenic not near genes chr2R_32_12830001 chr2R_12830001 RAL-382 1130 chr2R 12897312 12897360 chr2R 12897444 12897492 19 132 3.5 15.0 9.2 1.9 180 chr2R 12897312 intron vg + chr2R 12897402 intron vg + chr2R 12897492 intron vg + chr2R_19_12895001 chr2R_12895001 RAL-382 1131 chr2R 12952814 12952843 chr2R 12952948 12952977 12 134 0.0 11.0 5.5 1.8 163 chr2R 12952814 intergenic CG13321 + chr2R 12952896 intergenic CG13321 + chr2R 12952977 intergenic CG13321 + chr2R_12_12950001 chr2R_12950001 RAL-382 1132 chr2R 13030057 13030104 chr2R 13030186 13030222 9 126 15.0 6.5 10.8 0.8 165 chr2R 13030057 intergenic not near genes chr2R 13030140 intergenic not near genes chr2R 13030222 intergenic not near genes chr2R_9_13030001 chr2R_13030001 RAL-382 1133 chr2R 13034645 13034691 chr2R 13034775 13034836 7 141 0.0 0.0 0.0 7.0 191 chr2R 13034645 intergenic not near genes chr2R 13034740 intergenic not near genes chr2R 13034836 intergenic not near genes chr2R_7_13030001 chr2R_13030001 RAL-382 1134 chr2R 13043014 13043040 chr2R 13043144 13043170 9 130 0.0 10.5 5.2 1.5 156 chr2R 13043014 intergenic not near genes chr2R 13043092 intergenic not near genes chr2R 13043170 intergenic not near genes chr2R_9_13040001 chr2R_13040001 RAL-382 1135 chr2R 13089030 13089058 chr2R 13089209 13089242 6 180 12.0 5.5 8.8 0.6 212 chr2R 13089030 intergenic not near genes chr2R 13089136 intergenic not near genes chr2R 13089242 intergenic not near genes chr2R_6_13085001 chr2R_13085001 RAL-382 1136 chr2R 13089059 13089093 chr2R 13089207 13089277 6 172 4.5 5.0 4.8 1.0 218 chr2R 13089059 intergenic not near genes chr2R 13089168 intergenic not near genes chr2R 13089277 intergenic not near genes chr2R_6_13085001 chr2R_13085001 RAL-382 1137 chr2R 13136799 13136859 chr2R 13141647 13141707 Doc 24 4846 12.5 6.0 9.2 2.4 4908 chr2R 13136799 exon Cap-G + chr2R 13139253 intron Cap-G + chr2R 13141707 intron Cap-G + chr2R_24_13135001 chr2R_13135001 RAL-382 1138 chr2R 13163717 13163750 chr2R 13163832 13163866 11 142 6.5 11.5 9.0 1.1 149 chr2R 13163717 exon CG15870 - chr2R 13163792 exon CG15870 - chr2R 13163866 5` UTR CG15870 - chr2R_11_13160001 chr2R_13160001 RAL-382 1139 chr2R 13167392 13167462 chr2R 13167536 13167612 27 146 6.5 0.0 3.2 6.4 220 chr2R 13167392 intron GLaz - chr2R 13167502 intron GLaz - chr2R 13167612 intron GLaz - chr2R_27_13165001 chr2R_13165001 RAL-382 1140 chr2R 13213382 13213428 chr2R 13213519 13213565 8 137 2.0 0.0 1.0 4.0 183 chr2R 13213382 exon AQP - chr2R 13213474 intron AQP - chr2R 13213565 intron AQP - chr2R_8_13210001 chr2R_13210001 RAL-382 1141 chr2R 13300786 13300828 chr2R 13300918 13300983 6 133 5.0 0.0 2.5 1.7 197 chr2R 13300786 exon CG17047 + chr2R 13300884 intron CG17047 + chr2R 13300983 intron CG17047 + chr2R_6_13300001 chr2R_13300001 RAL-382 1142 chr2R 13309610 13309683 chr2R 13309778 13309851 11 168 3.5 3.5 3.5 2.4 241 chr2R 13309610 intergenic not near genes chr2R 13309730 intergenic not near genes chr2R 13309851 intergenic not near genes chr2R_11_13305001 chr2R_13305001 RAL-382 1143 chr2R 13356459 13356497 chr2R 13356594 13356600 18 131 16.5 0.0 8.2 2.0 141 chr2R 13356459 intergenic not near genes chr2R 13356530 intergenic not near genes chr2R 13356600 intergenic not near genes chr2R_18_13355001 chr2R_13355001 RAL-382 1144 chr2R 13403871 13403938 chr2R 13404006 13404072 28 135 6.0 1.0 3.5 6.2 201 chr2R 13403871 intergenic not near genes chr2R 13403972 intergenic not near genes chr2R 13404072 intergenic not near genes chr2R_28_13400001 chr2R_13400001 RAL-382 1145 chr2R 13426435 13426465 chr2R 13426598 13426628 11 163 15.0 5.0 10.0 1.0 193 chr2R 13426435 intron CG42321 - chr2R 13426532 intron CG42321 - chr2R 13426628 intron CG42321 - chr2R_11_13425001 chr2R_13425001 RAL-382 1146 chr2R 13439083 13439137 chr2R 13439271 13439325 33 187 8.0 7.5 7.8 3.7 242 chr2R 13439083 intergenic CG42321 -,cnn - chr2R 13439204 intergenic cnn -,CG42321 - chr2R 13439325 3` UTR cnn - chr2R_33_13435001 chr2R_13435001 RAL-382 1147 chr2R 13449664 13449675 chr2R 13449791 13449802 7 127 10.0 0.0 5.0 1.2 138 chr2R 13449664 intron cnn - chr2R 13449733 intron cnn - chr2R 13449802 intron cnn - chr2R_7_13445001 chr2R_13445001 RAL-382 1148 chr2R 13540155 13540196 chr2R 13540287 13540330 12 132 9.5 0.0 4.8 2.1 175 chr2R 13540155 intron CG6145 - chr2R 13540242 intron CG6145 - chr2R 13540330 intron CG6145 - chr2R_12_13540001 chr2R_13540001 RAL-382 1149 chr2R 13544510 13544591 chr2R 13544636 13544656 24 123 5.5 13.0 9.2 2.4 146 chr2R 13544510 intron CG6145 - chr2R 13544583 intron CG6145 - chr2R 13544656 intron CG6145 - chr2R_24_13540001 chr2R_13540001 RAL-382 1150 chr2R 13547032 13547093 chr2R 13547278 13547338 24 242 10.5 7.0 8.8 2.4 306 chr2R 13547032 intron CG6145 - chr2R 13547185 intron CG6145 - chr2R 13547338 intron CG6145 - chr2R_24_13545001 chr2R_13545001 RAL-382 1151 chr2R 13554685 13554772 chr2R 13554827 13554907 9 136 0.0 10.5 5.2 1.5 222 chr2R 13554685 intron Roe1 + chr2R 13554796 intron Roe1 + chr2R 13554907 intron Roe1 + chr2R_9_13550001 chr2R_13550001 RAL-382 1152 chr2R 13566215 13566246 chr2R 13566345 13566376 16 129 22.0 0.5 11.2 1.3 161 chr2R 13566215 intergenic not near genes chr2R 13566296 intergenic not near genes chr2R 13566376 intergenic not near genes chr2R_16_13565001 chr2R_13565001 RAL-382 1153 chr2R 13570976 13571055 chr2R 13571125 13571204 32 145 6.0 9.5 7.8 3.6 228 chr2R 13570976 3` UTR CG42807 - chr2R 13571090 3` UTR CG42807 - chr2R 13571204 3` UTR CG42807 - chr2R_32_13570001 chr2R_13570001 RAL-382 1154 chr2R 13580491 13580497 chr2R 13580891 13580897 jockey 5 400 0.5 7.5 4.0 1.0 406 chr2R 13580491 3` UTR CG6191 - chr2R 13580694 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580897 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_5_13580001 chr2R_13580001 RAL-382 1155 chr2R 13580499 13580508 chr2R 13580873 13580907 jockey 5 389 0.5 6.0 3.2 1.2 408 chr2R 13580499 3` UTR CG6191 - chr2R 13580703 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580907 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_5_13580001 chr2R_13580001 RAL-382 1156 chr2R 13632274 13632308 chr2R 13632412 13632426 8 133 15.5 13.5 14.5 0.5 152 chr2R 13632274 intron fas + chr2R 13632350 intron fas + chr2R 13632426 intron fas + chr2R_8_13630001 chr2R_13630001 RAL-382 1157 chr2R 13649955 13650026 chr2R 13650100 13650171 34 145 6.0 8.5 7.2 4.1 216 chr2R 13649955 intron fas + chr2R 13650063 intron fas + chr2R 13650171 intron fas + chr2R_34_13650001 chr2R_13650001 RAL-382 1158 chr2R 13663564 13663633 chr2R 13663692 13663761 19 126 7.5 10.5 9.0 1.9 197 chr2R 13663564 intron,5` UTR fas +,CG6209 - chr2R 13663662 intron fas + chr2R 13663761 intron fas + chr2R_19_13660001 chr2R_13660001 RAL-382 1159 chr2R 13673197 13673234 chr2R 13673656 13673689 8 452 7.5 13.0 10.2 0.7 492 chr2R 13673197 intron fas + chr2R 13673443 intron fas + chr2R 13673689 intron fas + chr2R_8_13670001 chr2R_13670001 RAL-382 1160 chr2R 603417 603422 chr2R 13676419 13676425 4 13073002 12.0 31.0 21.5 0.2 13073008 chr2R 603417 intron CG40378 + chr2R 7139921 intergenic not near genes chr2R 13676425 intron fas + chr2R_4_7135001 chr2R_7135001 RAL-382 1161 chr2R 13721168 13721229 chr2R 13721289 13721362 15 126 7.5 5.0 6.2 2.1 194 chr2R 13721168 intron fas + chr2R 13721265 intron fas + chr2R 13721362 intron fas + chr2R_15_13720001 chr2R_13720001 RAL-382 1162 chr2R 13726255 13726275 chr2R 13726437 13726457 11 181 5.5 11.0 8.2 1.2 202 chr2R 13726255 exon fas + chr2R 13726356 intron fas + chr2R 13726457 intron fas + chr2R_11_13725001 chr2R_13725001 RAL-382 1163 chr2R 13728093 13728123 chr2R 13735800 13735830 opus 21 7707 25.0 8.5 16.8 1.2 7737 chr2R 13728093 intron fas + chr2R 13731962 intron fas + chr2R 13735830 intron fas + chr2R_21_13730001 chr2R_13730001 RAL-382 1164 chr2R 13728124 13728156 chr2R 13735791 13735863 opus 20 7704 15.0 6.0 10.5 1.7 7739 chr2R 13728124 intron fas + chr2R 13731994 intron fas + chr2R 13735863 intron fas + chr2R_20_13730001 chr2R_13730001 RAL-382 1165 chr2R 13752775 13752828 chr2R 13752923 13752976 21 148 9.0 10.5 9.8 1.9 201 chr2R 13752775 intergenic not near genes chr2R 13752876 intergenic not near genes chr2R 13752976 intergenic not near genes chr2R_21_13750001 chr2R_13750001 RAL-382 1166 chr2R 13764459 13764480 chr2R 13764639 13764660 10 180 7.0 0.0 3.5 2.2 201 chr2R 13764459 intergenic not near genes chr2R 13764560 intergenic not near genes chr2R 13764660 intergenic not near genes chr2R_10_13760001 chr2R_13760001 RAL-382 1167 chr2R 13768940 13769007 chr2R 13769089 13769106 29 145 8.5 11.0 9.8 2.7 166 chr2R 13768940 intergenic not near genes chr2R 13769023 intergenic not near genes chr2R 13769106 intergenic not near genes chr2R_29_13765001 chr2R_13765001 RAL-382 1168 chr2R 13770447 13770525 chr2R 13770594 13770665 19 144 0.0 10.5 5.2 3.1 218 chr2R 13770447 intron Cpr50Ca + chr2R 13770556 intron Cpr50Ca + chr2R 13770665 intron Cpr50Ca + chr2R_19_13770001 chr2R_13770001 RAL-382 1169 chr2R 13817611 13817679 chr2R 13817740 13817811 10 131 12.5 1.5 7.0 1.2 200 chr2R 13817611 intron stj + chr2R 13817711 intron stj + chr2R 13817811 intron stj + chr2R_10_13815001 chr2R_13815001 RAL-382 1170 chr2R 13861388 13861456 chr2R 13861518 13861586 27 130 6.0 8.5 7.2 3.3 198 chr2R 13861388 intron CG16935 - chr2R 13861487 intron CG16935 - chr2R 13861586 intron CG16935 - chr2R_27_13860001 chr2R_13860001 RAL-382 1171 chr2R 13868850 13868924 chr2R 13868979 13869046 19 129 7.5 10.0 8.8 1.9 196 chr2R 13868850 intron shot - chr2R 13868948 intron shot - chr2R 13869046 intron shot - chr2R_19_13865001 chr2R_13865001 RAL-382 1172 chr2R 13905591 13905629 chr2R 13907583 13907661 Rt1a 8 2016 0.0 4.0 2.0 2.7 2070 chr2R 13905591 intron shot - chr2R 13906626 intron shot - chr2R 13907661 intron shot - chr2R_8_13905001 chr2R_13905001 RAL-382 1173 chr2R 13925851 13925891 chr2R 13926037 13926076 14 186 10.0 14.5 12.2 1.1 225 chr2R 13925851 intron shot - chr2R 13925964 intron shot - chr2R 13926076 intron shot - chr2R_14_13925001 chr2R_13925001 RAL-382 1174 chr2R 13933385 13933443 chr2R 13933517 13933575 17 129 11.0 6.0 8.5 1.8 190 chr2R 13933385 intron shot - chr2R 13933480 intron shot - chr2R 13933575 intron shot - chr2R_17_13930001 chr2R_13930001 RAL-382 1175 chr2R 13942445 13942458 chr2R 13942576 13942589 6 131 13.0 6.5 9.8 0.6 144 chr2R 13942445 intergenic DJ-1alpha -,shot - chr2R 13942517 intergenic DJ-1alpha -,shot - chr2R 13942589 3` UTR DJ-1alpha - chr2R_6_13940001 chr2R_13940001 RAL-382 1176 chr2R 14000187 14000264 chr2R 14000465 14000531 42 276 7.5 9.0 8.2 4.6 344 chr2R 14000187 intron mam + chr2R 14000359 intron mam + chr2R 14000531 intron mam + chr2R_42_14000001 chr2R_14000001 RAL-382 1177 chr2R 14037230 14037286 chr2R 14037363 14037418 14 133 7.0 11.5 9.2 1.4 188 chr2R 14037230 intron mam + chr2R 14037324 intron mam + chr2R 14037418 intron mam + chr2R_14_14035001 chr2R_14035001 RAL-382 1178 chr2R 14050815 14050845 chr2R 14050943 14050954 5 124 11.5 10.0 10.8 0.4 139 chr2R 14050815 intron mam + chr2R 14050884 intron mam + chr2R 14050954 intron mam + chr2R_5_14050001 chr2R_14050001 RAL-382 1179 chr2R 14285020 14285051 chr2R 14285143 14285184 10 132 0.0 11.5 5.8 1.5 164 chr2R 14285020 intron Ih + chr2R 14285102 intron Ih + chr2R 14285184 intron Ih + chr2R_10_14285001 chr2R_14285001 RAL-382 1180 chr2R 14457433 14457449 chr2R 14457559 14457575 10 126 0.0 4.5 2.2 3.1 142 chr2R 14457433 intron Oaz + chr2R 14457504 intron Oaz + chr2R 14457575 intron Oaz + chr2R_10_14455001 chr2R_14455001 RAL-382 1181 chr2R 14467268 14467321 chr2R 14476465 14476529 roo 26 9206 8.0 4.5 6.2 3.6 9261 chr2R 14467268 intergenic not near genes chr2R 14471898 intergenic not near genes chr2R 14476529 5` UTR CR44462 + chr2R_26_14470001 chr2R_14470001 RAL-382 1182 chr2R 14489832 14489900 chr2R 14490134 14490202 28 301 4.0 10.5 7.2 3.4 370 chr2R 14489832 intron L + chr2R 14490017 intron L + chr2R 14490202 intron L + chr2R_28_14490001 chr2R_14490001 RAL-382 1183 chr2R 14497337 14497385 chr2R 14498550 14498598 1360 13 1213 5.0 7.0 6.0 1.9 1261 chr2R 14497337 intergenic Cpsf160 -,L + chr2R 14497968 intron Cpsf160 - chr2R 14498598 3` UTR Cpsf160 - chr2R_13_14495001 chr2R_14495001 RAL-382 1184 chr2R 14514438 14514498 chr2R 14514584 14514641 20 145 6.5 12.0 9.2 2.0 203 chr2R 14514438 intron,exon Cpr51A -,CG30197 + chr2R 14514540 intron,intron Cpr51A -,CG30197 + chr2R 14514641 intron,intron Cpr51A -,CG30197 + chr2R_20_14510001 chr2R_14510001 RAL-382 1185 chr2R 14530720 14530792 chr2R 14530849 14530921 17 125 3.0 6.0 4.5 3.1 201 chr2R 14530720 intron ttv + chr2R 14530820 intron ttv + chr2R 14530921 intron ttv + chr2R_17_14530001 chr2R_14530001 RAL-382 1186 chr2R 14538924 14538981 chr2R 14539035 14539076 9 107 7.5 6.5 7.0 1.1 152 chr2R 14538924 intron ttv + chr2R 14539000 intron ttv + chr2R 14539076 intron ttv + chr2R_9_14535001 chr2R_14535001 RAL-382 1187 chr2R 14562136 14562149 chr2R 14562268 14562282 5 133 7.5 4.0 5.8 0.7 146 chr2R 14562136 intron ttv + chr2R 14562209 intron ttv + chr2R 14562282 intron ttv + chr2R_5_14560001 chr2R_14560001 RAL-382 1188 chr2R 14563479 14563510 chr2R 14563580 14563644 13 131 9.0 8.0 8.5 1.4 165 chr2R 14563479 intron ttv + chr2R 14563562 intron ttv + chr2R 14563644 intron ttv + chr2R_13_14560001 chr2R_14560001 RAL-382 1189 chr2R 14565522 14565592 chr2R 14565649 14565720 21 128 8.5 6.0 7.2 2.6 198 chr2R 14565522 intron ttv + chr2R 14565621 intron ttv + chr2R 14565720 intron ttv + chr2R_21_14565001 chr2R_14565001 RAL-382 1190 chr2R 14566947 14567014 chr2R 14567080 14567153 13 127 8.0 0.0 4.0 2.6 206 chr2R 14566947 intron ttv + chr2R 14567050 intron ttv + chr2R 14567153 intron ttv + chr2R_13_14565001 chr2R_14565001 RAL-382 1191 chr2R 14577441 14577494 chr2R 14577640 14577692 27 200 71.5 57.5 64.5 0.4 251 chr2R 14577441 intron ttv + chr2R 14577566 intron ttv + chr2R 14577692 intron ttv + chr2R_27_14575001 chr2R_14575001 RAL-382 1192 chr2R 14659281 14659332 chr2R 14659410 14659442 15 126 13.0 5.0 9.0 1.5 161 chr2R 14659281 intergenic not near genes chr2R 14659362 intergenic not near genes chr2R 14659442 intergenic not near genes chr2R_15_14655001 chr2R_14655001 RAL-382 1193 chr2R 14722261 14722292 chr2R 14722415 14722438 15 152 11.0 0.5 5.8 2.2 177 chr2R 14722261 intergenic not near genes chr2R 14722350 intergenic not near genes chr2R 14722438 intergenic not near genes chr2R_15_14720001 chr2R_14720001 RAL-382 1194 chr2R 14728168 14728244 chr2R 14728301 14728377 30 132 5.5 8.5 7.0 3.8 209 chr2R 14728168 intergenic not near genes chr2R 14728272 intergenic not near genes chr2R 14728377 intergenic not near genes chr2R_30_14725001 chr2R_14725001 RAL-382 1195 chr2R 14729917 14729986 chr2R 14730051 14730120 20 134 8.0 6.5 7.2 2.4 203 chr2R 14729917 intergenic not near genes chr2R 14730018 intergenic not near genes chr2R 14730120 intergenic not near genes chr2R_20_14730001 chr2R_14730001 RAL-382 1196 chr2R 14796413 14796552 chr2R 14796545 14796683 7 131 0.0 0.0 0.0 7.0 270 chr2R 14796413 intron kn - chr2R 14796548 intron kn - chr2R 14796683 intron kn - chr2R_7_14795001 chr2R_14795001 RAL-382 1197 chr2R 14799865 14799893 chr2R 14799991 14800019 19 125 7.0 27.5 17.2 1.0 154 chr2R 14799865 intron kn - chr2R 14799942 intron kn - chr2R 14800019 intron kn - chr2R_19_14795001 chr2R_14795001 RAL-382 1198 chr2R 14803437 14803503 chr2R 14803567 14803633 29 130 8.5 9.0 8.8 3.0 196 chr2R 14803437 intron kn - chr2R 14803535 intron kn - chr2R 14803633 intron kn - chr2R_29_14800001 chr2R_14800001 RAL-382 1199 chr2R 14814820 14814830 chr2R 14814947 14814957 7 127 9.5 14.5 12.0 0.5 137 chr2R 14814820 intergenic not near genes chr2R 14814888 intergenic not near genes chr2R 14814957 intergenic not near genes chr2R_7_14810001 chr2R_14810001 RAL-382 1200 chr2R 14826349 14826387 chr2R 14826503 14826541 16 154 6.0 7.5 6.8 2.1 192 chr2R 14826349 intergenic not near genes chr2R 14826445 intergenic not near genes chr2R 14826541 intergenic not near genes chr2R_16_14825001 chr2R_14825001 RAL-382 1201 chr2R 14842341 14842393 chr2R 14842487 14842539 25 146 9.5 4.0 6.8 3.2 198 chr2R 14842341 intergenic NaPi-T - chr2R 14842440 intergenic NaPi-T - chr2R 14842539 intergenic NaPi-T - chr2R_25_14840001 chr2R_14840001 RAL-382 1202 chr2R 14849146 14849161 chr2R 14849867 14849882 4 721 42.5 39.0 40.8 0.1 736 chr2R 14849146 exon SMC2 - chr2R 14849514 exon SMC2 - chr2R 14849882 exon SMC2 - chr2R_4_14845001 chr2R_14845001 RAL-382 1203 chr2R 14849165 14849223 chr2R 14849864 14849885 11 693 29.5 38.5 34.0 0.3 720 chr2R 14849165 exon SMC2 - chr2R 14849525 exon SMC2 - chr2R 14849885 exon SMC2 - chr2R_11_14845001 chr2R_14845001 RAL-382 1204 chr2R 14850022 14850047 chr2R 14850172 14850188 12 154 60.5 44.5 52.5 0.2 166 chr2R 14850022 exon SMC2 - chr2R 14850105 exon SMC2 - chr2R 14850188 exon SMC2 - chr2R_12_14850001 chr2R_14850001 RAL-382 1205 chr2R 14850048 14850087 chr2R 14850162 14850201 17 146 48.5 42.5 45.5 0.4 153 chr2R 14850048 exon SMC2 - chr2R 14850124 intron SMC2 - chr2R 14850201 exon SMC2 - chr2R_17_14850001 chr2R_14850001 RAL-382 1206 chr2R 14870736 14870810 chr2R 14870871 14870945 34 134 8.5 13.5 11.0 2.8 209 chr2R 14870736 intron Inr-a - chr2R 14870840 intron Inr-a - chr2R 14870945 5` UTR Inr-a - chr2R_34_14870001 chr2R_14870001 RAL-382 1207 chr2R 14889187 14889238 chr2R 14897842 14897885 Max-element 9 8649 10.5 0.5 5.5 1.4 8698 chr2R 14889187 intergenic Cyp6a8 - chr2R 14893536 intergenic not near genes chr2R 14897885 intergenic not near genes chr2R_9_14890001 chr2R_14890001 RAL-382 1208 chr2R 14911651 14911725 chr2R 14911824 14911898 31 173 5.0 9.0 7.0 3.9 247 chr2R 14911651 intron CG10249 - chr2R 14911774 intron CG10249 - chr2R 14911898 intron CG10249 - chr2R_31_14910001 chr2R_14910001 RAL-382 1209 chr2R 14919008 14919176 chr2R 14919138 14919335 31 149 0.0 0.0 0.0 31.0 327 chr2R 14919008 intron CG10249 - chr2R 14919172 intron CG10249 - chr2R 14919335 intron CG10249 - chr2R_31_14915001 chr2R_14915001 RAL-382 1210 chr2R 14922096 14922123 chr2R 14922222 14922249 18 126 21.5 10.0 15.8 1.1 153 chr2R 14922096 intron CG10249 - chr2R 14922172 intron CG10249 - chr2R 14922249 intron CG10249 - chr2R_18_14920001 chr2R_14920001 RAL-382 1211 chr2R 14922124 14922171 chr2R 14922221 14922297 17 123 11.0 11.0 11.0 1.4 173 chr2R 14922124 intron CG10249 - chr2R 14922210 intron CG10249 - chr2R 14922297 intron CG10249 - chr2R_17_14920001 chr2R_14920001 RAL-382 1212 chr2R 14968014 14968081 chr2R 14968142 14968210 28 128 0.0 7.0 3.5 6.2 196 chr2R 14968014 intron ckn + chr2R 14968112 intron ckn + chr2R 14968210 intron ckn + chr2R_28_14965001 chr2R_14965001 RAL-382 1213 chr2R 14979723 14979787 chr2R 14979849 14979913 29 126 11.5 9.0 10.2 2.6 190 chr2R 14979723 3` UTR ckn + chr2R 14979818 3` UTR ckn + chr2R 14979913 3` UTR ckn + chr2R_29_14975001 chr2R_14975001 RAL-382 1214 chr2R 15004681 15004758 chr2R 15005060 15005071 jockey 30 377 9.5 9.5 9.5 2.9 390 chr2R 15004681 intergenic not near genes chr2R 15004876 intergenic not near genes chr2R 15005071 intergenic not near genes chr2R_30_15000001 chr2R_15000001 RAL-382 1215 chr2R 15015416 15015435 chr2R 15022890 15022894 mdg1 6 7471 20.0 7.0 13.5 0.4 7478 chr2R 15015416 intron hbs + chr2R 15019155 intron hbs + chr2R 15022894 intron hbs + chr2R_6_15015001 chr2R_15015001 RAL-382 1216 chr2R 15015437 15015478 chr2R 15022881 15022952 mdg1 25 7469 9.5 5.5 7.5 2.9 7515 chr2R 15015437 intron hbs + chr2R 15019194 intron hbs + chr2R 15022952 intron hbs + chr2R_25_15015001 chr2R_15015001 RAL-382 1217 chr2R 15084936 15085002 chr2R 15092035 15092100 297 21 7096 4.5 9.0 6.8 2.7 7164 chr2R 15084936 intergenic not near genes chr2R 15088518 intergenic not near genes chr2R 15092100 5` UTR CR44457 + chr2R_21_15085001 chr2R_15085001 RAL-382 1218 chr2R 15092365 15092433 chr2R 15092592 15092660 33 227 8.0 11.0 9.5 3.1 295 chr2R 15092365 5` UTR CR44457 + chr2R 15092512 intergenic CR44457 + chr2R 15092660 intergenic CR44457 + chr2R_33_15090001 chr2R_15090001 RAL-382 1219 chr2R 15094844 15094908 chr2R 15094971 15095035 33 127 9.0 7.0 8.0 3.7 191 chr2R 15094844 intergenic not near genes chr2R 15094940 intergenic not near genes chr2R 15095035 intergenic not near genes chr2R_33_15090001 chr2R_15090001 RAL-382 1220 chr2R 15119274 15119350 chr2R 15127805 15127838 Tirant 25 8525 3.5 6.0 4.8 4.3 8564 chr2R 15119274 intron chn + chr2R 15123556 intron chn + chr2R 15127838 intron chn + chr2R_25_15120001 chr2R_15120001 RAL-382 1221 chr2R 15196046 15196125 chr2R 15196192 15196250 31 143 7.0 6.5 6.8 4.0 204 chr2R 15196046 intergenic not near genes chr2R 15196148 intergenic not near genes chr2R 15196250 intergenic not near genes chr2R_31_15195001 chr2R_15195001 RAL-382 1222 chr2R 15208113 15208185 chr2R 15208245 15208317 34 130 9.5 9.5 9.5 3.2 204 chr2R 15208113 intron,exon row -,Ir51b + chr2R 15208215 intron,exon row -,Ir51b + chr2R 15208317 intron,exon row -,Ir51b + chr2R_34_15205001 chr2R_15205001 RAL-382 1223 chr2R 15230390 15230395 chr2R 15230667 15230672 5 277 56.0 0.0 28.0 0.2 282 chr2R 15230390 intron,5` UTR Fs -,CR44370 + chr2R 15230531 intron,5` UTR Fs -,CR44370 + chr2R 15230672 intron,5` UTR Fs -,CR44370 + chr2R_5_15230001 chr2R_15230001 RAL-382 1224 chr2R 15230358 15230364 chr2R 15231013 15231019 10 656 60.0 15.0 37.5 0.3 661 chr2R 15230358 intron,5` UTR Fs -,CR44370 + chr2R 15230688 intron,5` UTR Fs -,CR44370 + chr2R 15231019 intron,5` UTR Fs -,CR44370 + chr2R_10_15230001 chr2R_15230001 RAL-382 1225 chr2R 15296112 15296165 chr2R 15296245 15296298 26 132 6.0 10.5 8.2 2.8 186 chr2R 15296112 intron Trpm - chr2R 15296205 intron Trpm - chr2R 15296298 intron Trpm - chr2R_26_15295001 chr2R_15295001 RAL-382 1226 chr2R 15330164 15330231 chr2R 15330348 15330415 28 183 0.5 5.0 2.8 7.4 251 chr2R 15330164 intergenic CR44371 - chr2R 15330290 intergenic CR44371 - chr2R 15330415 3` UTR CR44371 - chr2R_28_15330001 chr2R_15330001 RAL-382 1227 chr2R 15375025 15375068 chr2R 15375185 15375206 7 157 7.5 1.0 4.2 1.3 181 chr2R 15375025 intergenic not near genes chr2R 15375116 intergenic not near genes chr2R 15375206 intergenic not near genes chr2R_7_15375001 chr2R_15375001 RAL-382 1228 chr2R 15534627 15534696 chr2R 15534756 15534825 33 129 8.0 9.5 8.8 3.4 198 chr2R 15534627 intron CG30471 + chr2R 15534726 intron CG30471 + chr2R 15534825 intron CG30471 + chr2R_33_15530001 chr2R_15530001 RAL-382 1229 chr2R 15537664 15537741 chr2R 15537796 15537873 39 131 8.0 10.5 9.2 3.8 209 chr2R 15537664 3` UTR CG30471 + chr2R 15537768 3` UTR CG30471 + chr2R 15537873 intergenic CG30471 +,CG30467 + chr2R_39_15535001 chr2R_15535001 RAL-382 1230 chr2R 15606084 15606125 chr2R 15606211 15606252 19 126 16.0 9.5 12.8 1.4 168 chr2R 15606084 intergenic not near genes chr2R 15606168 intergenic not near genes chr2R 15606252 intergenic not near genes chr2R_19_15605001 chr2R_15605001 RAL-382 1231 chr2R 15645632 15645704 chr2R 15645778 15645851 16 142 0.5 0.0 0.2 13.3 219 chr2R 15645632 intron CG42524 + chr2R 15645742 intron CG42524 + chr2R 15645851 intron CG42524 + chr2R_16_15645001 chr2R_15645001 RAL-382 1232 chr2R 15656011 15656064 chr2R 15656152 15656205 9 141 0.0 13.5 6.8 1.2 194 chr2R 15656011 intron CG42524 + chr2R 15656108 intron CG42524 + chr2R 15656205 intron CG42524 + chr2R_9_15655001 chr2R_15655001 RAL-382 1233 chr2R 15784167 15784225 chr2R 15784309 15784366 20 140 6.0 7.5 6.8 2.6 199 chr2R 15784167 intron Zasp52 - chr2R 15784266 intron Zasp52 - chr2R 15784366 intron Zasp52 - chr2R_20_15780001 chr2R_15780001 RAL-382 1234 chr2R 15833488 15833543 chr2R 15833625 15833674 18 130 6.0 10.0 8.0 2.0 186 chr2R 15833488 intron,intron tun +,Poxn - chr2R 15833581 intron,intron tun +,Poxn - chr2R 15833674 intron,intron tun +,Poxn - chr2R_18_15830001 chr2R_15830001 RAL-382 1235 chr2R 16054935 16054959 chr2R 16055034 16055045 9 114 9.5 9.5 9.5 0.9 110 chr2R 16054935 intron CG8405 + chr2R 16054990 intron CG8405 + chr2R 16055045 intron CG8405 + chr2R_9_16050001 chr2R_16050001 RAL-382 1236 chr2R 16061675 16061717 chr2R 16064361 16064381 Burdock 10 2683 10.0 7.5 8.8 1.0 2706 chr2R 16061675 intergenic not near genes chr2R 16063028 intergenic not near genes chr2R 16064381 intergenic not near genes chr2R_10_16060001 chr2R_16060001 RAL-382 1237 chr2R 16068098 16068108 chr2R 16068209 16068215 5 118 12.0 8.0 10.0 0.5 117 chr2R 16068098 intergenic not near genes chr2R 16068156 intergenic not near genes chr2R 16068215 intergenic not near genes chr2R_5_16065001 chr2R_16065001 RAL-382 1238 chr2R 16245366 16245430 chr2R 16245510 16245574 15 143 2.5 9.0 5.8 2.2 208 chr2R 16245366 intron CngA - chr2R 16245470 intron CngA - chr2R 16245574 intron CngA - chr2R_15_16245001 chr2R_16245001 RAL-382 1239 chr2R 16289557 16289625 chr2R 16289701 16289769 20 140 4.0 5.0 4.5 3.6 212 chr2R 16289557 intron,exon CR43730 -,JhI-26 + chr2R 16289663 intron,intron CR43730 -,JhI-26 + chr2R 16289769 3` UTR,intron CR43730 -,JhI-26 + chr2R_20_16285001 chr2R_16285001 RAL-382 1240 chr2R 16307083 16307096 chr2R 16307194 16307222 4 121 9.5 11.0 10.2 0.4 139 chr2R 16307083 intergenic Nox +,CR45232 - chr2R 16307152 intergenic Nox +,CR45232 - chr2R 16307222 intergenic Nox + chr2R_4_16305001 chr2R_16305001 RAL-382 1241 chr2R 16352820 16352863 chr2R 16352953 16352996 11 133 10.5 11.0 10.8 0.9 176 chr2R 16352820 intergenic not near genes chr2R 16352908 intergenic not near genes chr2R 16352996 intergenic not near genes chr2R_11_16350001 chr2R_16350001 RAL-382 1242 chr2R 16392284 16392285 chr2R 16392418 16392419 4 134 4.0 9.0 6.5 0.5 135 chr2R 16392284 intron Sema-2b + chr2R 16392352 intron Sema-2b + chr2R 16392419 intron Sema-2b + chr2R_4_16390001 chr2R_16390001 RAL-382 1243 chr2R 16392286 16392327 chr2R 16392409 16392454 16 125 3.5 7.5 5.5 2.5 168 chr2R 16392286 intron Sema-2b + chr2R 16392370 intron Sema-2b + chr2R 16392454 intron Sema-2b + chr2R_16_16390001 chr2R_16390001 RAL-382 1244 chr2R 16486826 16486852 chr2R 16486971 16486996 17 144 17.0 17.0 17.0 0.9 170 chr2R 16486826 exon CG33458 + chr2R 16486911 intron CG33458 + chr2R 16486996 intron CG33458 + chr2R_17_16485001 chr2R_16485001 RAL-382 1245 chr2R 16486855 16486872 chr2R 16486969 16487017 11 142 11.0 16.5 13.8 0.7 162 chr2R 16486855 exon CG33458 + chr2R 16486936 intron CG33458 + chr2R 16487017 exon CG33458 + chr2R_11_16485001 chr2R_16485001 RAL-382 1246 chr2R 16539589 16539607 chr2R 16544845 16544863 copia 12 5255 11.5 0.0 5.8 1.8 5274 chr2R 16539589 intergenic not near genes chr2R 16542226 intergenic not near genes chr2R 16544863 intergenic not near genes chr2R_12_16540001 chr2R_16540001 RAL-382 1247 chr2R 16571827 16571899 chr2R 16571972 16572044 43 144 6.5 12.5 9.5 4.1 217 chr2R 16571827 intergenic CG4927 + chr2R 16571936 intergenic CG4927 + chr2R 16572044 intergenic CG4927 + chr2R_43_16570001 chr2R_16570001 RAL-382 1248 chr2R 16617070 16617089 chr2R 16617195 16617199 10 125 12.0 18.0 15.0 0.6 129 chr2R 16617070 intron CG5065 + chr2R 16617134 intron CG5065 + chr2R 16617199 intron CG5065 + chr2R_10_16615001 chr2R_16615001 RAL-382 1249 chr2R 16619930 16619940 chr2R 16620061 16620061 6 129 0.0 0.0 0.0 6.0 131 chr2R 16619930 intron CG5065 + chr2R 16619996 intron CG5065 + chr2R 16620061 intron CG5065 + chr2R_6_16615001 chr2R_16615001 RAL-382 1250 chr2R 16619942 16620003 chr2R 16620072 16620132 14 130 0.0 0.0 0.0 14.0 190 chr2R 16619942 intron CG5065 + chr2R 16620037 intron CG5065 + chr2R 16620132 intron CG5065 + chr2R_14_16620001 chr2R_16620001 RAL-382 1251 chr2R 16713054 16713063 chr2R 16713188 16713197 5 134 0.0 18.0 9.0 0.5 143 chr2R 16713054 intron CG30463 - chr2R 16713126 intron CG30463 - chr2R 16713197 intron CG30463 - chr2R_5_16710001 chr2R_16710001 RAL-382 1252 chr2R 16732814 16732882 chr2R 16733034 16733102 20 220 4.5 7.0 5.8 2.9 288 chr2R 16732814 5` UTR CG30463 - chr2R 16732958 intergenic CG30463 - chr2R 16733102 intergenic CG30463 - chr2R_20_16730001 chr2R_16730001 RAL-382 1253 chr2R 16737092 16737159 chr2R 16737238 16737249 26 146 9.5 4.0 6.8 3.3 157 chr2R 16737092 3` UTR CG43104 - chr2R 16737170 3` UTR CG43104 - chr2R 16737249 exon CG43104 - chr2R_26_16735001 chr2R_16735001 RAL-382 1254 chr2R 16740865 16740885 chr2R 16741009 16741029 10 144 10.5 12.5 11.5 0.8 164 chr2R 16740865 intergenic not near genes chr2R 16740947 intergenic not near genes chr2R 16741029 intergenic not near genes chr2R_10_16740001 chr2R_16740001 RAL-382 1255 chr2R 16740894 16740899 chr2R 16740985 16741042 5 132 9.5 10.5 10.0 0.5 148 chr2R 16740894 intergenic not near genes chr2R 16740968 intergenic not near genes chr2R 16741042 intergenic not near genes chr2R_5_16740001 chr2R_16740001 RAL-382 1256 chr2R 16740901 16740911 chr2R 16740983 16741054 9 128 7.0 8.0 7.5 1.1 153 chr2R 16740901 intergenic not near genes chr2R 16740978 intergenic not near genes chr2R 16741054 intergenic not near genes chr2R_9_16740001 chr2R_16740001 RAL-382 1257 chr2R 16775597 16775666 chr2R 16775911 16775980 40 313 10.0 8.0 9.0 4.0 383 chr2R 16775597 3` UTR Arp53D + chr2R 16775788 intergenic Arp53D + chr2R 16775980 intergenic Arp53D + chr2R_40_16775001 chr2R_16775001 RAL-382 1258 chr2R 16787427 16787496 chr2R 16787559 16787628 29 130 10.5 8.0 9.2 2.8 201 chr2R 16787427 intron CG5522 + chr2R 16787528 intron CG5522 + chr2R 16787628 intron CG5522 + chr2R_29_16785001 chr2R_16785001 RAL-382 1259 chr2R 16808699 16808763 chr2R 16808885 16808911 22 194 5.0 8.5 6.8 2.8 212 chr2R 16808699 intergenic not near genes chr2R 16808805 intergenic not near genes chr2R 16808911 intergenic not near genes chr2R_22_16805001 chr2R_16805001 RAL-382 1260 chr2R 16889516 16889595 chr2R 16889658 16889738 21 141 5.5 8.5 7.0 2.6 222 chr2R 16889516 intron CG8910 - chr2R 16889627 intron CG8910 - chr2R 16889738 intron CG8910 - chr2R_21_16885001 chr2R_16885001 RAL-382 1261 chr2R 16892269 16892312 chr2R 16892411 16892453 8 142 5.5 5.0 5.2 1.3 184 chr2R 16892269 intron CG8910 - chr2R 16892361 intron CG8910 - chr2R 16892453 intron CG8910 - chr2R_8_16890001 chr2R_16890001 RAL-382 1262 chr2R 16893729 16893802 chr2R 16893862 16893935 36 132 4.0 7.0 5.5 5.5 206 chr2R 16893729 intron CG8910 - chr2R 16893832 intron CG8910 - chr2R 16893935 intron CG8910 - chr2R_36_16890001 chr2R_16890001 RAL-382 1263 chr2R 16930609 16930627 chr2R 16930737 16930755 8 128 0.0 19.5 9.8 0.7 146 chr2R 16930609 intron Pkc53E + chr2R 16930682 intron Pkc53E + chr2R 16930755 intron Pkc53E + chr2R_8_16930001 chr2R_16930001 RAL-382 1264 chr2R 16933296 16933356 chr2R 16933445 16933505 20 149 5.0 12.0 8.5 2.1 209 chr2R 16933296 intron Pkc53E + chr2R 16933400 intron Pkc53E + chr2R 16933505 intron Pkc53E + chr2R_20_16930001 chr2R_16930001 RAL-382 1265 chr2R 17073015 17073076 chr2R 17073144 17073205 33 129 11.0 9.0 10.0 3.0 190 chr2R 17073015 intron CG30460 - chr2R 17073110 intron CG30460 - chr2R 17073205 intron CG30460 - chr2R_33_17070001 chr2R_17070001 RAL-382 1266 chr2R 17077948 17077981 chr2R 17078075 17078108 15 125 6.5 0.0 3.2 3.6 160 chr2R 17077948 intron CG30460 - chr2R 17078028 intron CG30460 - chr2R 17078108 intron CG30460 - chr2R_15_17075001 chr2R_17075001 RAL-382 1267 chr2R 17139358 17139406 chr2R 17139548 17139596 12 190 7.0 7.0 7.0 1.5 238 chr2R 17139358 3` UTR CG11395 + chr2R 17139477 3` UTR,3` UTR CG11395 +,CG43103 - chr2R 17139596 3` UTR CG43103 - chr2R_12_17135001 chr2R_17135001 RAL-382 1268 chr2R 17147200 17147262 chr2R 17152281 17152342 jockey 26 5079 12.0 12.5 12.2 2.0 5142 chr2R 17147200 intergenic not near genes chr2R 17149771 intergenic not near genes chr2R 17152342 intergenic not near genes chr2R_26_17145001 chr2R_17145001 RAL-382 1269 chr2R 17176355 17176379 chr2R 17182589 17182619 diver 17 6239 0.0 14.0 7.0 2.1 6264 chr2R 17176355 intergenic not near genes chr2R 17179487 intergenic not near genes chr2R 17182619 intergenic not near genes chr2R_17_17175001 chr2R_17175001 RAL-382 1270 chr2R 17188679 17188743 chr2R 17188817 17188881 20 137 9.0 8.0 8.5 2.1 202 chr2R 17188679 intergenic CR44389 - chr2R 17188780 intergenic CR44389 - chr2R 17188881 3` UTR CR44389 - chr2R_20_17185001 chr2R_17185001 RAL-382 1271 chr2R 17208827 17208842 chr2R 17208954 17208969 8 126 19.0 8.0 13.5 0.6 142 chr2R 17208827 intergenic not near genes chr2R 17208898 intergenic not near genes chr2R 17208969 intergenic not near genes chr2R_8_17205001 chr2R_17205001 RAL-382 1272 chr2R 17208850 17208894 chr2R 17208952 17209021 13 123 9.5 8.5 9.0 1.3 171 chr2R 17208850 intergenic not near genes chr2R 17208936 intergenic not near genes chr2R 17209021 intergenic not near genes chr2R_13_17205001 chr2R_17205001 RAL-382 1273 chr2R 17236468 17236524 chr2R 17241722 17241778 copia 21 5253 11.0 10.5 10.8 1.8 5310 chr2R 17236468 intron mbl + chr2R 17239123 intron mbl + chr2R 17241778 intron mbl + chr2R_21_17235001 chr2R_17235001 RAL-382 1274 chr2R 17259082 17259162 chr2R 17259250 17259328 26 166 4.5 6.0 5.2 4.2 246 chr2R 17259082 intron mbl + chr2R 17259205 intron mbl + chr2R 17259328 intron mbl + chr2R_26_17255001 chr2R_17255001 RAL-382 1275 chr2R 17443038 17443068 chr2R 17443180 17443199 13 137 19.0 6.5 12.8 0.9 161 chr2R 17443038 intron EDTP - chr2R 17443118 intron EDTP - chr2R 17443199 intron EDTP - chr2R_13_17440001 chr2R_17440001 RAL-382 1276 chr2R 17458966 17458974 chr2R 17459101 17459109 5 135 21.5 14.5 18.0 0.3 143 chr2R 17458966 intron CG14478 + chr2R 17459038 intron CG14478 + chr2R 17459109 intron CG14478 + chr2R_5_17455001 chr2R_17455001 RAL-382 1277 chr2R 17458975 17459028 chr2R 17459100 17459163 26 135 9.5 14.5 12.0 2.0 188 chr2R 17458975 intron CG14478 + chr2R 17459069 intron CG14478 + chr2R 17459163 intron CG14478 + chr2R_26_17455001 chr2R_17455001 RAL-382 1278 chr2R 17470273 17470354 chr2R 17470403 17470484 28 126 5.5 4.5 5.0 4.7 211 chr2R 17470273 intron qkr54B + chr2R 17470378 intron qkr54B + chr2R 17470484 intron qkr54B + chr2R_28_17470001 chr2R_17470001 RAL-382 1279 chr2R 17485875 17485934 chr2R 17490687 17490746 F-element 27 4812 10.0 8.0 9.0 2.7 4871 chr2R 17485875 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488310 intron NT5E-2 + chr2R 17490746 intron NT5E-2 + chr2R_27_17485001 chr2R_17485001 RAL-382 1280 chr2R 17528894 17528976 chr2R 17529149 17529168 15 249 7.0 6.5 6.8 1.9 274 chr2R 17528894 intron Patronin - chr2R 17529031 intron Patronin - chr2R 17529168 exon Patronin - chr2R_15_17525001 chr2R_17525001 RAL-382 1281 chr2R 17629564 17629617 chr2R 17629693 17629746 18 127 10.0 9.5 9.8 1.7 182 chr2R 17629564 intron,intron CG10936 -,rhi - chr2R 17629655 intron,intron CG10936 -,rhi - chr2R 17629746 intron,intron CG10936 -,rhi - chr2R_18_17625001 chr2R_17625001 RAL-382 1282 chr2R 17646295 17646320 chr2R 17646611 17646636 11 315 14.5 8.5 11.5 0.9 341 chr2R 17646295 intergenic not near genes chr2R 17646466 intergenic CCHa1-R - chr2R 17646636 intergenic CCHa1-R - chr2R_11_17645001 chr2R_17645001 RAL-382 1283 chr2R 17646322 17646351 chr2R 17646606 17646667 11 306 7.5 6.0 6.8 1.4 345 chr2R 17646322 intergenic not near genes chr2R 17646494 intergenic CCHa1-R - chr2R 17646667 intergenic CCHa1-R - chr2R_11_17645001 chr2R_17645001 RAL-382 1284 chr2R 17655527 17655595 chr2R 17655789 17655857 29 260 8.0 13.0 10.5 2.5 330 chr2R 17655527 intron CCHa1-R - chr2R 17655692 intron CCHa1-R - chr2R 17655857 intron CCHa1-R - chr2R_29_17655001 chr2R_17655001 RAL-382 1285 chr2R 17709957 17710012 chr2R 17710097 17710152 23 140 2.5 12.0 7.2 2.8 195 chr2R 17709957 intron CG6424 - chr2R 17710054 intron CG6424 - chr2R 17710152 intron CG6424 - chr2R_23_17710001 chr2R_17710001 RAL-382 1286 chr2R 17730602 17730673 chr2R 17730730 17730801 36 128 12.0 11.5 11.8 2.8 199 chr2R 17730602 intron,intron CG4975 +,CG4984 + chr2R 17730702 intron,intron CG4975 +,CG4984 + chr2R 17730801 intron,intron CG4975 +,CG4984 + chr2R_36_17730001 chr2R_17730001 RAL-382 1287 chr2R 17782318 17782391 chr2R 17783571 17783614 pogo 38 1252 9.0 7.5 8.2 4.1 1296 chr2R 17782318 intergenic CG33981 -,fab1 - chr2R 17782966 intergenic not near genes chr2R 17783614 intergenic mir-31a - chr2R_38_17780001 chr2R_17780001 RAL-382 1288 chr2R 17783989 17784045 chr2R 17784280 17784336 pogo 25 287 10.0 5.5 7.8 2.8 347 chr2R 17783989 intergenic mir-31a - chr2R 17784162 intergenic mir-31a - chr2R 17784336 intergenic mir-31a - chr2R_25_17780001 chr2R_17780001 RAL-382 1289 chr2R 17828528 17828577 chr2R 17828661 17828710 18 133 4.5 0.0 2.2 5.6 182 chr2R 17828528 exon grh + chr2R 17828619 intron grh + chr2R 17828710 intron grh + chr2R_18_17825001 chr2R_17825001 RAL-382 1290 chr2R 17831977 17831981 chr2R 17832109 17832113 5 132 0.0 12.5 6.2 0.7 136 chr2R 17831977 intron grh + chr2R 17832045 intron grh + chr2R 17832113 intron grh + chr2R_5_17830001 chr2R_17830001 RAL-382 1291 chr2R 17834989 17835062 chr2R 17835133 17835191 26 140 3.5 9.5 6.5 3.5 202 chr2R 17834989 intron grh + chr2R 17835090 intron grh + chr2R 17835191 intron grh + chr2R_26_17835001 chr2R_17835001 RAL-382 1292 chr2R 17846737 17846806 chr2R 17846871 17846936 23 134 5.0 12.5 8.8 2.3 199 chr2R 17846737 intron,5` UTR olf186-F +,olf186-M + chr2R 17846836 intron,5` UTR olf186-F +,olf186-M + chr2R 17846936 intron,5` UTR olf186-F +,olf186-M + chr2R_23_17845001 chr2R_17845001 RAL-382 1293 chr2R 17885932 17885999 chr2R 17887292 17887365 36 1362 5.0 7.0 6.0 5.1 1433 chr2R 17885932 intron Elk + chr2R 17886648 intron Elk + chr2R 17887365 intron,3` UTR Elk +,PPO1 - chr2R_36_17885001 chr2R_17885001 RAL-382 1294 chr2R 17918125 17918192 chr2R 17918252 17918289 30 125 12.0 14.0 13.0 2.1 164 chr2R 17918125 intron Elk + chr2R 17918207 intron Elk + chr2R 17918289 intron Elk + chr2R_30_17915001 chr2R_17915001 RAL-382 1295 chr2R 17929119 17929146 chr2R 17929248 17929265 7 128 3.0 9.5 6.2 1.0 146 chr2R 17929119 intergenic not near genes chr2R 17929192 intergenic not near genes chr2R 17929265 intergenic not near genes chr2R_7_17925001 chr2R_17925001 RAL-382 1296 chr2R 17960987 17961064 chr2R 17961142 17961198 8 133 2.5 6.0 4.2 1.5 211 chr2R 17960987 intergenic not near genes chr2R 17961092 intergenic not near genes chr2R 17961198 intergenic not near genes chr2R_8_17960001 chr2R_17960001 RAL-382 1297 chr2R 17963278 17963294 chr2R 17963461 17963477 7 183 14.5 5.0 9.8 0.6 199 chr2R 17963278 intergenic not near genes chr2R 17963378 intergenic not near genes chr2R 17963477 intergenic not near genes chr2R_7_17960001 chr2R_17960001 RAL-382 1298 chr2R 17966102 17966123 chr2R 17966234 17966255 8 131 11.5 6.0 8.8 0.8 153 chr2R 17966102 intergenic not near genes chr2R 17966178 intergenic not near genes chr2R 17966255 intergenic not near genes chr2R_8_17965001 chr2R_17965001 RAL-382 1299 chr2R 17966125 17966166 chr2R 17966230 17966298 11 126 6.0 6.0 6.0 1.6 173 chr2R 17966125 intergenic not near genes chr2R 17966212 intergenic not near genes chr2R 17966298 intergenic not near genes chr2R_11_17965001 chr2R_17965001 RAL-382 1300 chr2R 17999197 17999263 chr2R 17999468 17999534 26 271 8.0 8.5 8.2 2.8 337 chr2R 17999197 intron dpr13 - chr2R 17999366 intron dpr13 - chr2R 17999534 intron dpr13 - chr2R_26_17995001 chr2R_17995001 RAL-382 1301 chr2R 18045628 18045678 chr2R 18046030 18046074 jockey 27 402 16.5 12.0 14.2 1.8 446 chr2R 18045628 intergenic not near genes chr2R 18045851 intergenic not near genes chr2R 18046074 intergenic CG5767 - chr2R_27_18045001 chr2R_18045001 RAL-382 1302 chr2R 18045679 18045691 chr2R 18046020 18046093 jockey 5 390 14.0 10.0 12.0 0.4 414 chr2R 18045679 intergenic not near genes chr2R 18045886 intergenic CG5767 - chr2R 18046093 intergenic CG5767 - chr2R_5_18045001 chr2R_18045001 RAL-382 1303 chr2R 18054529 18054608 chr2R 18054661 18054740 14 130 3.5 10.0 6.8 1.8 211 chr2R 18054529 intergenic CR45313 +,CG10911 - chr2R 18054634 intergenic CR45313 + chr2R 18054740 intergenic CR45313 + chr2R_14_18050001 chr2R_18050001 RAL-382 1304 chr2R 18074552 18074619 chr2R 18074678 18074745 33 125 9.0 7.5 8.2 3.6 193 chr2R 18074552 intron CG34386 + chr2R 18074648 intron CG34386 + chr2R 18074745 intron CG34386 + chr2R_33_18070001 chr2R_18070001 RAL-382 1305 chr2R 18075930 18076002 chr2R 18076074 18076112 24 140 5.5 8.5 7.0 3.0 182 chr2R 18075930 intron CG34386 + chr2R 18076021 intron CG34386 + chr2R 18076112 intron CG34386 + chr2R_24_18075001 chr2R_18075001 RAL-382 1306 chr2R 18089147 18089224 chr2R 18089309 18089380 12 160 5.5 8.5 7.0 1.5 233 chr2R 18089147 intron CG34386 + chr2R 18089264 intron CG34386 + chr2R 18089380 intron CG34386 + chr2R_12_18085001 chr2R_18085001 RAL-382 1307 chr2R 18111639 18111708 chr2R 18115557 18115627 F-element 25 3918 6.5 11.0 8.8 2.6 3988 chr2R 18111639 intergenic not near genes chr2R 18113633 intergenic not near genes chr2R 18115627 intergenic not near genes chr2R_25_18110001 chr2R_18110001 RAL-382 1308 chr2R 18127336 18127339 chr2R 18127497 18127508 4 167 2.0 10.5 6.2 0.6 172 chr2R 18127336 intron Spn55B + chr2R 18127422 intron Spn55B + chr2R 18127508 intron Spn55B + chr2R_4_18125001 chr2R_18125001 RAL-382 1309 chr2R 18127341 18127349 chr2R 18127495 18127518 5 163 2.0 9.0 5.5 0.8 177 chr2R 18127341 intron Spn55B + chr2R 18127430 intron Spn55B + chr2R 18127518 intron Spn55B + chr2R_5_18125001 chr2R_18125001 RAL-382 1310 chr2R 18127352 18127398 chr2R 18127494 18127567 19 166 1.5 8.5 5.0 3.2 215 chr2R 18127352 intron Spn55B + chr2R 18127460 intron Spn55B + chr2R 18127567 intron Spn55B + chr2R_19_18125001 chr2R_18125001 RAL-382 1311 chr2R 18141827 18141862 chr2R 18141965 18142000 13 137 6.0 9.0 7.5 1.5 173 chr2R 18141827 intron pAbp + chr2R 18141914 intron pAbp + chr2R 18142000 intron pAbp + chr2R_13_18140001 chr2R_18140001 RAL-382 1312 chr2R 18144808 18144863 chr2R 18144980 18145035 4 172 37.5 32.5 35.0 0.1 227 chr2R 18144808 exon pAbp + chr2R 18144922 intron pAbp + chr2R 18145035 exon pAbp + chr2R_4_18140001 chr2R_18140001 RAL-382 1313 chr2R 18190822 18190844 chr2R 18190947 18190970 11 126 12.0 7.5 9.8 1.0 148 chr2R 18190822 intron CG33958 - chr2R 18190896 intron CG33958 - chr2R 18190970 intron CG33958 - chr2R_11_18190001 chr2R_18190001 RAL-382 1314 chr2R 18307536 18307596 chr2R 18307674 18307734 27 137 10.0 8.5 9.2 2.6 198 chr2R 18307536 intron sbb - chr2R 18307635 intron sbb - chr2R 18307734 intron sbb - chr2R_27_18305001 chr2R_18305001 RAL-382 1315 chr2R 18320031 18320083 chr2R 18320194 18320249 7 165 4.5 0.0 2.2 2.2 218 chr2R 18320031 intron sbb - chr2R 18320140 intron sbb - chr2R 18320249 intron sbb - chr2R_7_18320001 chr2R_18320001 RAL-382 1316 chr2R 18322155 18322217 chr2R 18322282 18322351 17 125 4.0 6.0 5.0 2.8 196 chr2R 18322155 intron sbb - chr2R 18322253 intron sbb - chr2R 18322351 intron sbb - chr2R_17_18320001 chr2R_18320001 RAL-382 1317 chr2R 18338386 18338455 chr2R 18338557 18338620 25 170 7.0 8.0 7.5 2.9 234 chr2R 18338386 intron sbb - chr2R 18338503 intron sbb - chr2R 18338620 intron sbb - chr2R_25_18335001 chr2R_18335001 RAL-382 1318 chr2R 18358353 18358420 chr2R 18372606 18372610 roo 10 14253 6.5 0.0 3.2 2.4 14257 chr2R 18358353 intergenic not near genes chr2R 18365482 intergenic not near genes chr2R 18372610 intergenic not near genes chr2R_10_18365001 chr2R_18365001 RAL-382 1319 chr2R 18390819 18390894 chr2R 18390956 18391031 20 137 6.0 9.5 7.8 2.3 212 chr2R 18390819 intergenic CG15068 - chr2R 18390925 intergenic CG15068 - chr2R 18391031 intergenic CG15068 - chr2R_20_18390001 chr2R_18390001 RAL-382 1320 chr2R 18398124 18398186 chr2R 18398268 18398330 26 142 11.0 4.5 7.8 3.0 206 chr2R 18398124 intron GstE10 - chr2R 18398227 intron GstE10 - chr2R 18398330 intron GstE10 - chr2R_26_18395001 chr2R_18395001 RAL-382 1321 chr2R 18398679 18398684 chr2R 18402510 18402517 5 3831 31.0 21.5 26.2 0.2 3838 chr2R 18398679 exon GstE1 + chr2R 18400598 intergenic GstE3 +,GstE2 + chr2R 18402517 intergenic not near genes chr2R_5_18400001 chr2R_18400001 RAL-382 1322 chr2R 18405757 18405785 chr2R 18405887 18405915 13 130 11.0 16.5 13.8 0.9 158 chr2R 18405757 intergenic GstE6 +,GstE5 + chr2R 18405836 intergenic GstE6 +,GstE5 + chr2R 18405915 intergenic GstE6 + chr2R_13_18405001 chr2R_18405001 RAL-382 1323 chr2R 18408240 18408305 chr2R 18408411 18408476 27 167 10.5 14.0 12.2 2.0 236 chr2R 18408240 exon GstE8 + chr2R 18408358 exon GstE8 + chr2R 18408476 exon GstE8 + chr2R_27_18405001 chr2R_18405001 RAL-382 1324 chr2R 18471893 18471930 chr2R 18472019 18472056 19 126 5.5 6.5 6.0 2.7 163 chr2R 18471893 intron CG30116 - chr2R 18471974 intron CG30116 - chr2R 18472056 intron CG30116 - chr2R_19_18470001 chr2R_18470001 RAL-382 1325 chr2R 18480408 18480487 chr2R 18480565 18480644 10 157 0.0 0.0 0.0 10.0 236 chr2R 18480408 intron CG30116 - chr2R 18480526 intron CG30116 - chr2R 18480644 intron CG30116 - chr2R_10_18480001 chr2R_18480001 RAL-382 1326 chr2R 18486803 18486853 chr2R 18487115 18487165 15 312 8.5 10.5 9.5 1.4 362 chr2R 18486803 intron CG30116 - chr2R 18486984 intron CG30116 - chr2R 18487165 intron CG30116 - chr2R_15_18485001 chr2R_18485001 RAL-382 1327 chr2R 18486855 18486879 chr2R 18487109 18487144 11 300 5.5 10.0 7.8 1.2 289 chr2R 18486855 intron CG30116 - chr2R 18487000 intron CG30116 - chr2R 18487144 intron CG30116 - chr2R_11_18485001 chr2R_18485001 RAL-382 1328 chr2R 18487792 18487827 chr2R 18495293 18495328 blood 10 7500 7.5 9.0 8.2 1.1 7536 chr2R 18487792 intron CG30116 - chr2R 18491560 intron CG30116 - chr2R 18495328 intron CG30116 - chr2R_10_18490001 chr2R_18490001 RAL-382 1329 chr2R 18519904 18519957 chr2R 18520031 18520084 14 124 11.0 7.5 9.2 1.4 180 chr2R 18519904 intron CG43066 + chr2R 18519994 intron CG43066 + chr2R 18520084 intron CG43066 + chr2R_14_18515001 chr2R_18515001 RAL-382 1330 chr2R 18519960 18519968 chr2R 18520027 18520095 5 111 8.5 7.0 7.8 0.6 135 chr2R 18519960 intron CG43066 + chr2R 18520028 intron CG43066 + chr2R 18520095 intron CG43066 + chr2R_5_18520001 chr2R_18520001 RAL-382 1331 chr2R 18575752 18575830 chr2R 18581990 18582042 3S18 27 6230 3.5 5.0 4.2 5.2 6290 chr2R 18575752 intron GEFmeso - chr2R 18578897 intron GEFmeso - chr2R 18582042 intron GEFmeso - chr2R_27_18575001 chr2R_18575001 RAL-382 1332 chr2R 18590825 18590835 chr2R 18600027 18600037 roo 4 9202 11.5 7.0 9.2 0.4 9212 chr2R 18590825 intron GEFmeso - chr2R 18595431 intron GEFmeso - chr2R 18600037 intron GEFmeso - chr2R_4_18595001 chr2R_18595001 RAL-382 1333 chr2R 18590836 18590899 chr2R 18600022 18600073 roo 20 9194 5.5 6.5 6.0 2.9 9237 chr2R 18590836 intron GEFmeso - chr2R 18595454 intron GEFmeso - chr2R 18600073 intron GEFmeso - chr2R_20_18595001 chr2R_18595001 RAL-382 1334 chr2R 18715153 18715229 chr2R 18715282 18715358 23 126 6.5 5.5 6.0 3.3 205 chr2R 18715153 intergenic not near genes chr2R 18715256 intergenic not near genes chr2R 18715358 intergenic not near genes chr2R_23_18715001 chr2R_18715001 RAL-382 1335 chr2R 18727891 18727965 chr2R 18728596 18728651 12 694 5.0 3.5 4.2 2.3 760 chr2R 18727891 intron,3` UTR Hs3st-A +,List - chr2R 18728271 intron,exon Hs3st-A +,List - chr2R 18728651 intron,exon Hs3st-A +,List - chr2R_12_18725001 chr2R_18725001 RAL-382 1336 chr2R 18732310 18732372 chr2R 18732494 18732556 25 183 10.0 11.0 10.5 2.2 246 chr2R 18732310 intron Hs3st-A + chr2R 18732433 intron Hs3st-A + chr2R 18732556 5` UTR Hs3st-A + chr2R_25_18730001 chr2R_18730001 RAL-382 1337 chr2R 18769592 18769609 chr2R 18769749 18769766 11 157 17.0 23.5 20.2 0.5 174 chr2R 18769592 intron Mctp + chr2R 18769679 intron Mctp + chr2R 18769766 intron Mctp + chr2R_11_18765001 chr2R_18765001 RAL-382 1338 chr2R 18778566 18778594 chr2R 18778714 18778742 13 147 6.5 0.0 3.2 3.1 176 chr2R 18778566 intergenic not near genes chr2R 18778654 intergenic not near genes chr2R 18778742 intergenic not near genes chr2R_13_18775001 chr2R_18775001 RAL-382 1339 chr2R 18785880 18785944 chr2R 18786009 18786072 21 125 11.5 6.5 9.0 2.1 192 chr2R 18785880 intron CG15080 + chr2R 18785976 intron CG15080 + chr2R 18786072 intron CG15080 + chr2R_21_18785001 chr2R_18785001 RAL-382 1340 chr2R 18808021 18808085 chr2R 18808160 18808224 12 139 0.0 0.0 0.0 12.0 203 chr2R 18808021 intergenic CG15096 - chr2R 18808122 intergenic CG15096 - chr2R 18808224 intergenic CG15096 - chr2R_12_18805001 chr2R_18805001 RAL-382 1341 chr2R 18928651 18928670 chr2R 18928788 18928800 4 133 10.0 8.5 9.2 0.4 149 chr2R 18928651 intron sano + chr2R 18928726 intron sano + chr2R 18928800 intron sano + chr2R_4_18925001 chr2R_18925001 RAL-382 1342 chr2R 18988973 18989046 chr2R 18989101 18989174 35 127 0.0 3.0 1.5 14.0 201 chr2R 18988973 intron tn + chr2R 18989074 intron tn + chr2R 18989174 intron tn + chr2R_35_18985001 chr2R_18985001 RAL-382 1343 chr2R 19010704 19010766 chr2R 19010866 19010907 19 156 6.5 6.0 6.2 2.6 203 chr2R 19010704 intergenic not near genes chr2R 19010806 intergenic not near genes chr2R 19010907 intergenic not near genes chr2R_19_19010001 chr2R_19010001 RAL-382 1344 chr2R 19026003 19026061 chr2R 19026154 19026212 12 151 6.0 3.5 4.8 2.1 209 chr2R 19026003 exon 5-HT1B - chr2R 19026108 intron 5-HT1B - chr2R 19026212 intron 5-HT1B - chr2R_12_19025001 chr2R_19025001 RAL-382 1345 chr2R 19042653 19042697 chr2R 19042782 19042804 16 119 14.0 12.0 13.0 1.1 151 chr2R 19042653 intergenic not near genes chr2R 19042728 intergenic not near genes chr2R 19042804 intergenic not near genes chr2R_16_19040001 chr2R_19040001 RAL-382 1346 chr2R 19044795 19044816 chr2R 19045047 19045068 7 252 8.5 2.0 5.2 1.1 273 chr2R 19044795 intergenic not near genes chr2R 19044932 intergenic not near genes chr2R 19045068 intergenic not near genes chr2R_7_19040001 chr2R_19040001 RAL-382 1347 chr2R 19050663 19050708 chr2R 19050796 19050846 19 137 6.5 8.0 7.2 2.3 183 chr2R 19050663 intergenic not near genes chr2R 19050754 intergenic not near genes chr2R 19050846 intergenic not near genes chr2R_19_19050001 chr2R_19050001 RAL-382 1348 chr2R 19096458 19096524 chr2R 19096659 19096725 34 198 5.5 7.0 6.2 4.7 267 chr2R 19096458 exon 5-HT1A + chr2R 19096592 intron 5-HT1A + chr2R 19096725 intron 5-HT1A + chr2R_34_19095001 chr2R_19095001 RAL-382 1349 chr2R 19101710 19101757 chr2R 19101828 19101900 21 135 7.5 5.5 6.5 2.8 190 chr2R 19101710 intron 5-HT1A + chr2R 19101805 intron 5-HT1A + chr2R 19101900 intron 5-HT1A + chr2R_21_19100001 chr2R_19100001 RAL-382 1350 chr2R 19103388 19103430 chr2R 19103520 19103562 20 131 5.0 7.0 6.0 2.9 174 chr2R 19103388 intron 5-HT1A + chr2R 19103475 intron 5-HT1A + chr2R 19103562 intron 5-HT1A + chr2R_20_19100001 chr2R_19100001 RAL-382 1351 chr2R 19105095 19105100 chr2R 19105227 19105232 4 132 0.0 5.0 2.5 1.1 137 chr2R 19105095 intron 5-HT1A + chr2R 19105164 intron 5-HT1A + chr2R 19105232 intron 5-HT1A + chr2R_4_19105001 chr2R_19105001 RAL-382 1352 chr2R 19253449 19253520 chr2R 19253592 19253663 35 142 9.0 9.5 9.2 3.4 214 chr2R 19253449 intergenic CG33453 - chr2R 19253556 intergenic CG33453 - chr2R 19253663 intergenic CG33453 - chr2R_35_19250001 chr2R_19250001 RAL-382 1353 chr2R 19264349 19264424 chr2R 19264483 19264560 22 128 6.0 9.5 7.8 2.5 211 chr2R 19264349 intergenic not near genes chr2R 19264454 intergenic not near genes chr2R 19264560 intergenic not near genes chr2R_22_19260001 chr2R_19260001 RAL-382 1354 chr2R 19285879 19285912 chr2R 19286578 19286656 5 722 6.0 4.5 5.2 0.8 777 chr2R 19285879 exon CG10474 - chr2R 19286268 exon CG10474 - chr2R 19286656 intron CG10474 - chr2R_5_19285001 chr2R_19285001 RAL-382 1355 chr2R 19363137 19363217 chr2R 19363263 19363343 21 125 2.5 3.5 3.0 5.2 206 chr2R 19363137 intergenic not near genes chr2R 19363240 intergenic CG10051 + chr2R 19363343 intergenic CG10051 + chr2R_21_19360001 chr2R_19360001 RAL-382 1356 chr2R 19376086 19376117 chr2R 19376329 19376360 6 243 12.0 13.5 12.8 0.4 274 chr2R 19376086 intron CG10062 + chr2R 19376223 intron CG10062 + chr2R 19376360 intron CG10062 + chr2R_6_19375001 chr2R_19375001 RAL-382 1357 chr2R 19384906 19384941 chr2R 19385044 19385049 4 130 11.5 0.0 5.8 0.6 143 chr2R 19384906 3` UTR CG10073 + chr2R 19384978 intergenic CG10073 + chr2R 19385049 intergenic CG10073 + chr2R_4_19380001 chr2R_19380001 RAL-382 1358 chr2R 19385097 19385138 chr2R 19385690 19385731 23 593 0.0 19.0 9.5 2.2 634 chr2R 19385097 intergenic CG10073 + chr2R 19385414 intergenic CG10073 + chr2R 19385731 intergenic CG10081 + chr2R_23_19385001 chr2R_19385001 RAL-382 1359 chr2R 19639542 19639599 chr2R 19639668 19639725 19 123 11.0 7.5 9.2 1.9 183 chr2R 19639542 intergenic not near genes chr2R 19639634 intergenic not near genes chr2R 19639725 intergenic not near genes chr2R_19_19635001 chr2R_19635001 RAL-382 1360 chr2R 19715816 19715843 chr2R 19723335 19723362 blood 7 7519 18.0 10.0 14.0 0.5 7546 chr2R 19715816 intergenic not near genes chr2R 19719589 intergenic not near genes chr2R 19723362 intergenic not near genes chr2R_7_19715001 chr2R_19715001 RAL-382 1361 chr2R 19715845 19715857 chr2R 19723332 19723364 blood 5 7510 15.5 10.0 12.8 0.4 7519 chr2R 19715845 intergenic not near genes chr2R 19719604 intergenic not near genes chr2R 19723364 intergenic not near genes chr2R_5_19715001 chr2R_19715001 RAL-382 1362 chr2R 19773969 19774035 chr2R 19774132 19774198 33 163 8.5 11.0 9.8 3.1 229 chr2R 19773969 intergenic not near genes chr2R 19774084 intergenic not near genes chr2R 19774198 intergenic not near genes chr2R_33_19770001 chr2R_19770001 RAL-382 1363 chr2R 19776568 19776625 chr2R 19779932 19779946 jockey 21 3368 8.5 14.5 11.5 1.7 3378 chr2R 19776568 intergenic not near genes chr2R 19778257 intergenic not near genes chr2R 19779946 intergenic not near genes chr2R_21_19775001 chr2R_19775001 RAL-382 1364 chr2R 19807625 19807701 chr2R 19807757 19807833 27 130 4.5 5.0 4.8 4.7 208 chr2R 19807625 intergenic not near genes chr2R 19807729 intergenic not near genes chr2R 19807833 intergenic not near genes chr2R_27_19805001 chr2R_19805001 RAL-382 1365 chr2R 19914845 19914856 chr2R 19922308 19922319 mdg1 5 7463 1.0 8.5 4.8 0.9 7474 chr2R 19914845 intergenic not near genes chr2R 19918582 intergenic not near genes chr2R 19922319 intergenic not near genes chr2R_5_19915001 chr2R_19915001 RAL-382 1366 chr2R 19957384 19957454 chr2R 19962636 19962686 copia 23 5245 10.5 9.0 9.8 2.1 5302 chr2R 19957384 intergenic CG44623 + chr2R 19960035 intergenic not near genes chr2R 19962686 intergenic not near genes chr2R_23_19960001 chr2R_19960001 RAL-382 1367 chr2R 20069205 20069248 chr2R 20071885 20071928 opus 15 2680 14.5 10.5 12.5 1.1 2723 chr2R 20069205 intergenic not near genes chr2R 20070566 intergenic not near genes chr2R 20071928 intergenic not near genes chr2R_15_20070001 chr2R_20070001 RAL-382 1368 chr2R 20069249 20069270 chr2R 20071882 20071950 opus 4 2668 9.0 9.0 9.0 0.4 2701 chr2R 20069249 intergenic not near genes chr2R 20070600 intergenic not near genes chr2R 20071950 intergenic not near genes chr2R_4_20070001 chr2R_20070001 RAL-382 1369 chr2R 20087978 20088027 chr2R 20088136 20088185 1360 12 158 4.0 8.5 6.2 1.7 207 chr2R 20087978 intergenic not near genes chr2R 20088082 intergenic not near genes chr2R 20088185 intergenic not near genes chr2R_12_20085001 chr2R_20085001 RAL-382 1370 chr2R 20162635 20162707 chr2R 20162801 20162874 40 165 5.5 5.5 5.5 6.2 239 chr2R 20162635 intergenic not near genes chr2R 20162754 intergenic not near genes chr2R 20162874 intergenic not near genes chr2R_40_20160001 chr2R_20160001 RAL-382 1371 chr2R 20223904 20223985 chr2R 20224039 20224120 43 134 7.5 7.5 7.5 5.1 216 chr2R 20223904 intergenic not near genes chr2R 20224012 intergenic not near genes chr2R 20224120 intergenic not near genes chr2R_43_20220001 chr2R_20220001 RAL-382 1372 chr2R 20338718 20338732 chr2R 20338848 20338862 6 130 18.5 0.0 9.2 0.6 144 chr2R 20338718 intergenic not near genes chr2R 20338790 intergenic not near genes chr2R 20338862 intergenic not near genes chr2R_6_20335001 chr2R_20335001 RAL-382 1373 chr2R 20338749 20338786 chr2R 20338843 20338891 5 118 12.0 0.0 6.0 0.7 142 chr2R 20338749 intergenic not near genes chr2R 20338820 intergenic not near genes chr2R 20338891 intergenic not near genes chr2R_5_20335001 chr2R_20335001 RAL-382 1374 chr2R 20368469 20368490 chr2R 20377682 20377703 roo 7 9213 18.5 11.0 14.8 0.4 9234 chr2R 20368469 intergenic not near genes chr2R 20373086 intergenic not near genes chr2R 20377703 intergenic not near genes chr2R_7_20370001 chr2R_20370001 RAL-382 1375 chr2R 20379107 20379114 chr2R 20379240 20379247 7 133 17.0 0.0 8.5 0.7 140 chr2R 20379107 intergenic not near genes chr2R 20379177 intergenic not near genes chr2R 20379247 intergenic not near genes chr2R_7_20375001 chr2R_20375001 RAL-382 1376 chr2R 20382284 20382355 chr2R 20382419 20382456 23 126 10.0 5.0 7.5 2.7 172 chr2R 20382284 intergenic not near genes chr2R 20382370 intergenic not near genes chr2R 20382456 intergenic not near genes chr2R_23_20380001 chr2R_20380001 RAL-382 1377 chr2R 20384496 20384547 chr2R 20384631 20384682 14 135 4.5 5.5 5.0 2.3 186 chr2R 20384496 intergenic not near genes chr2R 20384589 intergenic not near genes chr2R 20384682 intergenic not near genes chr2R_14_20380001 chr2R_20380001 RAL-382 1378 chr2R 20426396 20426444 chr2R 20426535 20426605 18 154 7.5 4.5 6.0 2.6 209 chr2R 20426396 intron CG12484 + chr2R 20426500 intron CG12484 + chr2R 20426605 intron CG12484 + chr2R_18_20425001 chr2R_20425001 RAL-382 1379 chr2R 20434042 20434099 chr2R 20434179 20434235 10 137 0.0 9.0 4.5 1.8 193 chr2R 20434042 intron CG12484 + chr2R 20434138 intron CG12484 + chr2R 20434235 intron CG12484 + chr2R_10_20430001 chr2R_20430001 RAL-382 1380 chr2R 20449191 20449254 chr2R 20449314 20449380 25 125 6.5 6.5 6.5 3.3 189 chr2R 20449191 intron CG12484 + chr2R 20449286 intron CG12484 + chr2R 20449380 intron CG12484 + chr2R_25_20445001 chr2R_20445001 RAL-382 1381 chr2R 20467793 20467830 chr2R 20467936 20467980 14 149 15.0 6.5 10.8 1.2 187 chr2R 20467793 intron CG12484 + chr2R 20467886 intron CG12484 + chr2R 20467980 intron CG12484 + chr2R_14_20465001 chr2R_20465001 RAL-382 1382 chr2R 20467846 20467863 chr2R 20467935 20468014 4 135 7.0 6.5 6.8 0.5 168 chr2R 20467846 intron CG12484 + chr2R 20467930 intron CG12484 + chr2R 20468014 intron CG12484 + chr2R_4_20465001 chr2R_20465001 RAL-382 1383 chr2R 20479838 20479893 chr2R 20479964 20480019 13 123 8.0 7.5 7.8 1.5 181 chr2R 20479838 intergenic not near genes chr2R 20479928 intergenic not near genes chr2R 20480019 intergenic not near genes chr2R_13_20475001 chr2R_20475001 RAL-382 1384 chr2R 20506173 20506203 chr2R 20506329 20506342 9 148 5.0 8.0 6.5 1.2 169 chr2R 20506173 3` UTR CR44644 - chr2R 20506258 3` UTR,5` UTR CR44644 -,CR44645 + chr2R 20506342 3` UTR,5` UTR CR44644 -,CR44645 + chr2R_9_20505001 chr2R_20505001 RAL-382 1385 chr2R 20506204 20506242 chr2R 20506318 20506375 9 134 3.5 6.5 5.0 1.5 171 chr2R 20506204 3` UTR,5` UTR CR44644 -,CR44645 + chr2R 20506290 3` UTR,5` UTR CR44644 -,CR44645 + chr2R 20506375 3` UTR,5` UTR CR44644 -,CR44645 + chr2R_9_20505001 chr2R_20505001 RAL-382 1386 chr2R 20506920 20506963 chr2R 20507046 20507089 13 126 0.0 1.0 0.5 8.7 169 chr2R 20506920 intergenic CR44645 + chr2R 20507004 intergenic CR44645 + chr2R 20507089 intergenic CR44645 + chr2R_13_20505001 chr2R_20505001 RAL-382 1387 chr2R 20541941 20542008 chr2R 20542069 20542136 31 127 6.0 12.0 9.0 3.1 195 chr2R 20541941 intergenic not near genes chr2R 20542038 intergenic not near genes chr2R 20542136 intergenic not near genes chr2R_31_20540001 chr2R_20540001 RAL-382 1388 chr2R 20555287 20555346 chr2R 20555421 20555486 8 138 0.0 6.5 3.2 1.9 199 chr2R 20555287 intergenic not near genes chr2R 20555386 intergenic not near genes chr2R 20555486 intergenic not near genes chr2R_8_20555001 chr2R_20555001 RAL-382 1389 chr2R 20572522 20572537 chr2R 20572662 20572677 8 140 11.0 8.5 9.8 0.7 155 chr2R 20572522 intron qsm - chr2R 20572600 intron qsm - chr2R 20572677 intron qsm - chr2R_8_20570001 chr2R_20570001 RAL-382 1390 chr2R 20572538 20572585 chr2R 20572661 20572725 13 138 5.0 7.5 6.2 1.8 187 chr2R 20572538 intron qsm - chr2R 20572632 intron qsm - chr2R 20572725 intron qsm - chr2R_13_20570001 chr2R_20570001 RAL-382 1391 chr2R 20590623 20590667 chr2R 20590752 20590796 16 127 4.5 9.5 7.0 2.0 173 chr2R 20590623 intron bl + chr2R 20590710 intron bl + chr2R 20590796 intron bl + chr2R_16_20590001 chr2R_20590001 RAL-382 1392 chr2R 20592538 20592601 chr2R 20592666 20592729 23 126 6.5 10.5 8.5 2.4 191 chr2R 20592538 intron bl + chr2R 20592634 intron bl + chr2R 20592729 intron bl + chr2R_23_20590001 chr2R_20590001 RAL-382 1393 chr2R 20667322 20667327 chr2R 20667484 20667489 4 162 14.5 17.5 16.0 0.2 167 chr2R 20667322 intergenic Fem-1 -,exu - chr2R 20667406 intergenic exu -,Fem-1 - chr2R 20667489 3` UTR exu - chr2R_4_20665001 chr2R_20665001 RAL-382 1394 chr2R 20667328 20667347 chr2R 20667482 20667499 6 159 10.5 17.5 14.0 0.4 171 chr2R 20667328 intergenic Fem-1 -,exu - chr2R 20667414 intergenic exu -,Fem-1 - chr2R 20667499 3` UTR exu - chr2R_6_20665001 chr2R_20665001 RAL-382 1395 chr2R 20739417 20739435 chr2R 20744229 20744253 F-element 6 4816 13.0 8.0 10.5 0.5 4836 chr2R 20739417 intron dpr + chr2R 20741835 intron dpr + chr2R 20744253 intron dpr + chr2R_6_20740001 chr2R_20740001 RAL-382 1396 chr2R 20739436 20739464 chr2R 20744224 20744268 F-element 9 4809 9.5 7.0 8.2 1.0 4832 chr2R 20739436 intron dpr + chr2R 20741852 intron dpr + chr2R 20744268 intron dpr + chr2R_9_20740001 chr2R_20740001 RAL-382 1397 chr2R 20757421 20757440 chr2R 20757548 20757567 5 127 9.5 6.5 8.0 0.6 146 chr2R 20757421 intergenic not near genes chr2R 20757494 intergenic not near genes chr2R 20757567 intergenic not near genes chr2R_5_20755001 chr2R_20755001 RAL-382 1398 chr2R 20783261 20783323 chr2R 20788083 20788138 F-element 36 4821 8.5 9.0 8.8 3.7 4877 chr2R 20783261 intergenic not near genes chr2R 20785700 intergenic not near genes chr2R 20788138 intergenic CG43666 - chr2R_36_20785001 chr2R_20785001 RAL-382 1399 chr2R 20962860 20962930 chr2R 20963008 20963068 27 147 9.0 9.0 9.0 2.7 208 chr2R 20962860 intergenic not near genes chr2R 20962964 intergenic not near genes chr2R 20963068 intergenic not near genes chr2R_27_20960001 chr2R_20960001 RAL-382 1400 chr2R 20966977 20967057 chr2R 20967104 20967184 17 127 4.5 1.0 2.8 4.5 207 chr2R 20966977 intergenic not near genes chr2R 20967080 intergenic not near genes chr2R 20967184 intergenic not near genes chr2R_17_20965001 chr2R_20965001 RAL-382 1401 chr2R 20994484 20994495 chr2R 20994672 20994683 6 188 0.0 0.0 0.0 6.0 199 chr2R 20994484 intergenic dgt3 -,Prosalpha3 + chr2R 20994584 intergenic dgt3 -,Prosalpha3 + chr2R 20994683 intergenic Prosalpha3 +,dgt3 - chr2R_6_20990001 chr2R_20990001 RAL-382 1402 chr2R 21103489 21103553 chr2R 21103619 21103694 25 128 11.0 0.0 5.5 3.8 205 chr2R 21103489 intron ktub + chr2R 21103592 intron ktub + chr2R 21103694 intron ktub + chr2R_25_21100001 chr2R_21100001 RAL-382 1403 chr2R 21113430 21113481 chr2R 21113569 21113620 30 139 11.5 11.0 11.2 2.5 190 chr2R 21113430 intron ktub + chr2R 21113525 intron ktub + chr2R 21113620 intron ktub + chr2R_30_21110001 chr2R_21110001 RAL-382 1404 chr2R 21151104 21151145 chr2R 21153766 21153828 opus 9 2681 0.0 10.0 5.0 1.5 2724 chr2R 21151104 intron CG30389 - chr2R 21152466 intron CG30389 - chr2R 21153828 intron CG30389 - chr2R_9_21150001 chr2R_21150001 RAL-382 1405 chr2R 21217275 21217286 chr2R 21217412 21217418 4 136 12.5 0.0 6.2 0.6 143 chr2R 21217275 exon CG15661 - chr2R 21217346 5` UTR CG15661 - chr2R 21217418 5` UTR CG15661 - chr2R_4_21215001 chr2R_21215001 RAL-382 1406 chr2R 21237531 21237572 chr2R 21237702 21237743 15 171 12.0 8.0 10.0 1.4 212 chr2R 21237531 intron ASPP - chr2R 21237637 intron ASPP - chr2R 21237743 intron ASPP - chr2R_15_21235001 chr2R_21235001 RAL-382 1407 chr2R 21258453 21258465 chr2R 21258581 21258593 5 128 0.0 20.0 10.0 0.5 140 chr2R 21258453 intron Rgk3 + chr2R 21258523 intron Rgk3 + chr2R 21258593 intron Rgk3 + chr2R_5_21255001 chr2R_21255001 RAL-382 1408 chr2R 21259621 21259642 chr2R 21259752 21259761 6 127 12.0 11.0 11.5 0.5 140 chr2R 21259621 intron Rgk3 + chr2R 21259691 intron Rgk3 + chr2R 21259761 intron Rgk3 + chr2R_6_21255001 chr2R_21255001 RAL-382 1409 chr2R 21259650 21259664 chr2R 21259744 21259789 5 115 7.5 11.0 9.2 0.5 139 chr2R 21259650 intron Rgk3 + chr2R 21259720 intron Rgk3 + chr2R 21259789 intron Rgk3 + chr2R_5_21255001 chr2R_21255001 RAL-382 1410 chr2R 21285386 21285436 chr2R 21285513 21285563 26 124 13.5 18.0 15.8 1.5 177 chr2R 21285386 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285474 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285563 3` UTR,3` UTR MFS16 +,CG10505 - chr2R_26_21285001 chr2R_21285001 RAL-382 1411 chr2R 21352513 21352532 chr2R 21352674 21352693 10 161 18.5 4.5 11.5 0.8 180 chr2R 21352513 intergenic not near genes chr2R 21352603 intergenic not near genes chr2R 21352693 intergenic not near genes chr2R_10_21350001 chr2R_21350001 RAL-382 1412 chr2R 21447067 21447111 chr2R 21447220 21447266 9 152 4.5 4.0 4.2 1.7 199 chr2R 21447067 intron Sdc - chr2R 21447166 intron Sdc - chr2R 21447266 intron Sdc - chr2R_9_21445001 chr2R_21445001 RAL-382 1413 chr2R 21472268 21472331 chr2R 21472396 21472436 28 126 9.5 6.5 8.0 3.1 168 chr2R 21472268 intron Sdc - chr2R 21472352 intron Sdc - chr2R 21472436 intron Sdc - chr2R_28_21470001 chr2R_21470001 RAL-382 1414 chr2R 21486635 21486710 chr2R 21486782 21486857 26 140 6.5 6.5 6.5 3.5 222 chr2R 21486635 exon Sara + chr2R 21486746 3` UTR Sara + chr2R 21486857 3` UTR Sara + chr2R_26_21485001 chr2R_21485001 RAL-382 1415 chr2R 21505715 21505790 chr2R 21505846 21505920 36 129 9.5 6.5 8.0 4.0 205 chr2R 21505715 intron MESK2 + chr2R 21505818 intron MESK2 + chr2R 21505920 intron MESK2 + chr2R_36_21505001 chr2R_21505001 RAL-382 1416 chr2R 21527415 21527478 chr2R 21527546 21527609 26 131 9.0 6.5 7.8 3.0 194 chr2R 21527415 intron Egfr + chr2R 21527512 intron Egfr + chr2R 21527609 intron Egfr + chr2R_26_21525001 chr2R_21525001 RAL-382 1417 chr2R 21532844 21532880 chr2R 21532972 21533008 18 126 4.0 8.5 6.2 2.5 164 chr2R 21532844 intron Egfr + chr2R 21532926 intron Egfr + chr2R 21533008 intron Egfr + chr2R_18_21530001 chr2R_21530001 RAL-382 1418 chr2R 21540638 21540694 chr2R 21540906 21540962 22 268 6.5 7.0 6.8 2.8 324 chr2R 21540638 intron Egfr + chr2R 21540800 intron Egfr + chr2R 21540962 intron Egfr + chr2R_22_21540001 chr2R_21540001 RAL-382 1419 chr2R 21578713 21578759 chr2R 21578848 21578879 21 134 7.5 11.0 9.2 2.1 166 chr2R 21578713 intergenic not near genes chr2R 21578796 intergenic not near genes chr2R 21578879 intergenic not near genes chr2R_21_21575001 chr2R_21575001 RAL-382 1420 chr2R 21592819 21592840 chr2R 21592947 21592947 5 124 7.5 10.0 8.8 0.5 128 chr2R 21592819 intergenic not near genes chr2R 21592883 intergenic not near genes chr2R 21592947 intergenic not near genes chr2R_5_21590001 chr2R_21590001 RAL-382 1421 chr2R 21700122 21700185 chr2R 21700243 21700255 20 123 9.0 11.5 10.2 1.8 133 chr2R 21700122 intron HmgZ - chr2R 21700188 intron HmgZ - chr2R 21700255 intron HmgZ - chr2R_20_21700001 chr2R_21700001 RAL-382 1422 chr2R 21710899 21710975 chr2R 21711031 21711106 18 131 8.0 3.5 5.8 2.6 207 chr2R 21710899 intron,intron HmgD +,CG30403 - chr2R 21711002 intron,intron HmgD +,CG30403 - chr2R 21711106 intron,intron HmgD +,CG30403 - chr2R_18_21710001 chr2R_21710001 RAL-382 1423 chr2R 21721544 21721610 chr2R 21721666 21721747 35 136 9.5 9.5 9.5 3.3 203 chr2R 21721544 intron LBR + chr2R 21721646 intron LBR + chr2R 21721747 intron LBR + chr2R_35_21720001 chr2R_21720001 RAL-382 1424 chr2R 21738238 21738287 chr2R 21747448 21747471 roo 10 9197 11.0 8.0 9.5 1.0 9233 chr2R 21738238 intergenic not near genes chr2R 21742854 intergenic not near genes chr2R 21747471 intergenic not near genes chr2R_10_21740001 chr2R_21740001 RAL-382 1425 chr2R 21738290 21738306 chr2R 21747436 21747451 roo 9 9175 6.5 7.5 7.0 1.1 9161 chr2R 21738290 intergenic not near genes chr2R 21742870 intergenic not near genes chr2R 21747451 intergenic not near genes chr2R_9_21740001 chr2R_21740001 RAL-382 1426 chr2R 21753041 21753111 chr2R 21753576 21753646 roo 26 533 8.5 10.5 9.5 2.5 605 chr2R 21753041 intergenic not near genes chr2R 21753344 intergenic not near genes chr2R 21753646 intergenic not near genes chr2R_26_21750001 chr2R_21750001 RAL-382 1427 chr2R 21759510 21759585 chr2R 21759647 21759722 32 134 2.0 11.0 6.5 4.3 212 chr2R 21759510 intergenic not near genes chr2R 21759616 intergenic not near genes chr2R 21759722 intergenic not near genes chr2R_32_21755001 chr2R_21755001 RAL-382 1428 chr2R 21809477 21809523 chr2R 21817768 21817803 roo 13 8288 0.0 8.0 4.0 2.6 8326 chr2R 21809477 intergenic not near genes chr2R 21813640 intergenic not near genes chr2R 21817803 intergenic not near genes chr2R_13_21810001 chr2R_21810001 RAL-382 1429 chr2R 21851749 21851822 chr2R 21851880 21851905 28 129 10.0 6.0 8.0 3.1 156 chr2R 21851749 intergenic not near genes chr2R 21851827 intergenic not near genes chr2R 21851905 intergenic not near genes chr2R_28_21850001 chr2R_21850001 RAL-382 1430 chr2R 21857296 21857367 chr2R 21857436 21857508 20 139 12.5 5.5 9.0 2.0 212 chr2R 21857296 intergenic not near genes chr2R 21857402 intergenic not near genes chr2R 21857508 intergenic not near genes chr2R_20_21855001 chr2R_21855001 RAL-382 1431 chr2R 21886098 21886166 chr2R 21886217 21886316 21 140 3.5 0.0 1.8 7.5 218 chr2R 21886098 intron Fili + chr2R 21886207 intron Fili + chr2R 21886316 intron Fili + chr2R_21_21885001 chr2R_21885001 RAL-382 1432 chr2R 21888274 21888320 chr2R 21888415 21888461 22 141 5.0 11.5 8.2 2.4 187 chr2R 21888274 intron Fili + chr2R 21888368 intron Fili + chr2R 21888461 intron Fili + chr2R_22_21885001 chr2R_21885001 RAL-382 1433 chr2R 21905187 21905257 chr2R 21905382 21905452 38 194 9.0 11.0 10.0 3.5 265 chr2R 21905187 intron Fili + chr2R 21905320 intron Fili + chr2R 21905452 intron Fili + chr2R_38_21905001 chr2R_21905001 RAL-382 1434 chr2R 21914306 21914329 chr2R 21914442 21914466 11 137 7.0 7.0 7.0 1.4 160 chr2R 21914306 intron Fili + chr2R 21914386 intron Fili + chr2R 21914466 intron Fili + chr2R_11_21910001 chr2R_21910001 RAL-382 1435 chr2R 22008987 22009072 chr2R 22009126 22009203 28 136 0.5 9.5 5.0 4.7 216 chr2R 22008987 intron CG34370 - chr2R 22009095 intron CG34370 - chr2R 22009203 intron CG34370 - chr2R_28_22005001 chr2R_22005001 RAL-382 1436 chr2R 22029429 22029505 chr2R 22029617 22029693 34 188 6.5 6.5 6.5 4.5 264 chr2R 22029429 intron CG34370 - chr2R 22029561 intron CG34370 - chr2R 22029693 intron CG34370 - chr2R_34_22025001 chr2R_22025001 RAL-382 1437 chr2R 22040123 22040186 chr2R 22040237 22040292 12 121 4.0 4.5 4.2 2.3 169 chr2R 22040123 intergenic not near genes chr2R 22040208 intergenic not near genes chr2R 22040292 intergenic not near genes chr2R_12_22040001 chr2R_22040001 RAL-382 1438 chr2R 22088216 22088296 chr2R 22088374 22088434 8 150 0.0 0.0 0.0 8.0 218 chr2R 22088216 intron CG13502 - chr2R 22088325 intron CG13502 - chr2R 22088434 intron CG13502 - chr2R_8_22085001 chr2R_22085001 RAL-382 1439 chr2R 22099857 22099929 chr2R 22099986 22100058 18 128 6.5 5.5 6.0 2.6 201 chr2R 22099857 intergenic CG11073 - chr2R 22099958 intergenic CG11073 - chr2R 22100058 intergenic not near genes chr2R_18_22095001 chr2R_22095001 RAL-382 1440 chr2R 22132243 22132286 chr2R 22132373 22132416 24 130 13.0 3.5 8.2 2.6 173 chr2R 22132243 intergenic not near genes chr2R 22132330 intergenic not near genes chr2R 22132416 intergenic not near genes chr2R_24_22130001 chr2R_22130001 RAL-382 1441 chr2R 22135444 22135462 chr2R 22135553 22135584 5 141 4.5 4.5 4.5 0.9 140 chr2R 22135444 intergenic not near genes chr2R 22135514 intergenic not near genes chr2R 22135584 intergenic not near genes chr2R_5_22135001 chr2R_22135001 RAL-382 1442 chr2R 22161666 22161744 chr2R 22161857 22161939 21 187 5.0 7.5 6.2 2.9 273 chr2R 22161666 intron a + chr2R 22161802 intron a + chr2R 22161939 intron a + chr2R_21_22160001 chr2R_22160001 RAL-382 1443 chr2R 22182861 22182936 chr2R 22182995 22183070 26 134 5.0 7.5 6.2 3.6 209 chr2R 22182861 5` UTR CG11170 - chr2R 22182966 intergenic CG11170 -,MED16 +,CG11275 + chr2R 22183070 intergenic MED16 +,CG11170 -,CG11275 + chr2R_26_22180001 chr2R_22180001 RAL-382 1444 chr2R 22248825 22248871 chr2R 22248918 22248998 22 114 8.5 7.0 7.8 2.5 173 chr2R 22248825 intron dve + chr2R 22248912 intron dve + chr2R 22248998 intron dve + chr2R_22_22245001 chr2R_22245001 RAL-382 1445 chr2R 22259603 22259605 chr2R 22259712 22259736 4 125 16.0 14.5 15.2 0.2 133 chr2R 22259603 intron dve + chr2R 22259670 intron dve + chr2R 22259736 intron dve + chr2R_4_22255001 chr2R_22255001 RAL-382 1446 chr2R 22259610 22259621 chr2R 22259702 22259745 6 123 11.0 12.0 11.5 0.5 135 chr2R 22259610 intron dve + chr2R 22259678 intron dve + chr2R 22259745 intron dve + chr2R_6_22255001 chr2R_22255001 RAL-382 1447 chr2R 22324443 22324519 chr2R 22324811 22324887 32 367 7.0 8.0 7.5 3.8 444 chr2R 22324443 intron Gp150 + chr2R 22324665 intron Gp150 + chr2R 22324887 intron Gp150 + chr2R_32_22320001 chr2R_22320001 RAL-382 1448 chr2R 22349652 22349668 chr2R 22351486 22351500 jockey 6 1832 21.0 11.0 16.0 0.4 1848 chr2R 22349652 intron Liprin-gamma - chr2R 22350576 intron Liprin-gamma - chr2R 22351500 intron Liprin-gamma - chr2R_6_22350001 chr2R_22350001 RAL-382 1449 chr2R 22349669 22349712 chr2R 22351482 22351546 jockey 19 1831 12.0 11.0 11.5 1.5 1877 chr2R 22349669 intron Liprin-gamma - chr2R 22350608 intron Liprin-gamma - chr2R 22351546 intron Liprin-gamma - chr2R_19_22350001 chr2R_22350001 RAL-382 1450 chr2R 22360341 22360347 chr2R 22360824 22360830 jockey 6 483 24.5 4.5 14.5 0.4 489 chr2R 22360341 intron Liprin-gamma - chr2R 22360586 intron Liprin-gamma - chr2R 22360830 intron Liprin-gamma - chr2R_6_22360001 chr2R_22360001 RAL-382 1451 chr2R 22370724 22370783 chr2R 22370851 22370910 19 126 3.5 8.5 6.0 2.7 186 chr2R 22370724 intron Liprin-gamma - chr2R 22370817 intron Liprin-gamma - chr2R 22370910 intron Liprin-gamma - chr2R_19_22370001 chr2R_22370001 RAL-382 1452 chr2R 22374593 22374638 chr2R 22374730 22374775 15 137 6.0 9.5 7.8 1.7 182 chr2R 22374593 3` UTR CR44759 - chr2R 22374684 3` UTR CR44759 - chr2R 22374775 3` UTR CR44759 - chr2R_15_22370001 chr2R_22370001 RAL-382 1453 chr2R 22380312 22380393 chr2R 22380453 22380534 19 141 7.0 0.0 3.5 4.2 222 chr2R 22380312 intron wrapper + chr2R 22380423 intron wrapper + chr2R 22380534 intron wrapper + chr2R_19_22380001 chr2R_22380001 RAL-382 1454 chr2R 22460331 22460405 chr2R 22460460 22460534 45 129 8.0 10.5 9.2 4.4 203 chr2R 22460331 intron CG10384 + chr2R 22460432 intron CG10384 + chr2R 22460534 intron CG10384 + chr2R_45_22460001 chr2R_22460001 RAL-382 1455 chr2R 22465281 22465340 chr2R 22465530 22465589 BS 33 248 10.5 20.0 15.2 2.0 308 chr2R 22465281 intron CG10384 + chr2R 22465435 intron CG10384 + chr2R 22465589 intron CG10384 + chr2R_33_22465001 chr2R_22465001 RAL-382 1456 chr2R 22523011 22523078 chr2R 22523137 22523199 32 122 10.5 2.5 6.5 4.3 188 chr2R 22523011 intron px - chr2R 22523105 intron px - chr2R 22523199 intron px - chr2R_32_22520001 chr2R_22520001 RAL-382 1457 chr2R 22525706 22525778 chr2R 22529311 22529313 jockey 37 3602 8.5 11.0 9.8 3.4 3607 chr2R 22525706 intron px - chr2R 22527510 intron px - chr2R 22529313 intron px - chr2R_37_22525001 chr2R_22525001 RAL-382 1458 chr2R 22580387 22580444 chr2R 22586581 22586638 diver 34 6194 11.0 6.5 8.8 3.5 6251 chr2R 22580387 intron dnr1 - chr2R 22583512 intron dnr1 - chr2R 22586638 intron dnr1 - chr2R_34_22580001 chr2R_22580001 RAL-382 1459 chr2R 22588106 22588118 chr2R 22588251 22588260 5 143 14.5 14.5 14.5 0.3 154 chr2R 22588106 intron dnr1 - chr2R 22588183 intron dnr1 - chr2R 22588260 intron dnr1 - chr2R_5_22585001 chr2R_22585001 RAL-382 1460 chr2R 22588120 22588158 chr2R 22588249 22588303 8 138 11.5 13.5 12.5 0.6 183 chr2R 22588120 intron dnr1 - chr2R 22588212 intron dnr1 - chr2R 22588303 intron dnr1 - chr2R_8_22585001 chr2R_22585001 RAL-382 1461 chr2R 22629355 22629372 chr2R 22629482 22629499 7 127 8.0 5.5 6.8 0.9 144 chr2R 22629355 intron CG33143 + chr2R 22629427 intron CG33143 + chr2R 22629499 intron CG33143 + chr2R_7_22625001 chr2R_22625001 RAL-382 1462 chr2R 22629373 22629390 chr2R 22629480 22629517 8 124 5.0 5.5 5.2 1.3 144 chr2R 22629373 intron CG33143 + chr2R 22629445 intron CG33143 + chr2R 22629517 intron CG33143 + chr2R_8_22625001 chr2R_22625001 RAL-382 1463 chr2R 22662216 22662233 chr2R 22662367 22662384 7 151 13.5 7.0 10.2 0.6 168 chr2R 22662216 intron CG42566 + chr2R 22662300 intron CG42566 + chr2R 22662384 intron CG42566 + chr2R_7_22660001 chr2R_22660001 RAL-382 1464 chr2R 22662243 22662273 chr2R 22662363 22662393 10 138 5.5 7.0 6.2 1.4 150 chr2R 22662243 intron CG42566 + chr2R 22662318 intron CG42566 + chr2R 22662393 intron CG42566 + chr2R_10_22660001 chr2R_22660001 RAL-382 1465 chr2R 22679705 22679744 chr2R 22679832 22679832 10 122 11.0 4.5 7.8 1.1 127 chr2R 22679705 intergenic not near genes chr2R 22679768 intergenic not near genes chr2R 22679832 intergenic not near genes chr2R_10_22675001 chr2R_22675001 RAL-382 1466 chr2R 22729414 22729467 chr2R 22729667 22729725 INE-1 22 254 3.5 10.0 6.8 2.8 311 chr2R 22729414 intron jbug - chr2R 22729570 intron jbug - chr2R 22729725 intron jbug - chr2R_22_22725001 chr2R_22725001 RAL-382 1467 chr2R 22774925 22774995 chr2R 22775394 22775405 jockey 22 465 12.0 8.5 10.2 2.0 480 chr2R 22774925 intron CG42260 - chr2R 22775165 intron CG42260 - chr2R 22775405 intron CG42260 - chr2R_22_22775001 chr2R_22775001 RAL-382 1468 chr2R 22843007 22843053 chr2R 22845019 22845065 flea 11 2012 11.0 8.0 9.5 1.0 2058 chr2R 22843007 intergenic CG9826 + chr2R 22844036 intergenic not near genes chr2R 22845065 intergenic not near genes chr2R_11_22840001 chr2R_22840001 RAL-382 1469 chr2R 22953340 22953381 chr2R 22953484 22953524 12 144 6.5 4.5 5.5 1.8 184 chr2R 22953340 intron CR32835 - chr2R 22953432 3` UTR CR32835 - chr2R 22953524 3` UTR CR32835 - chr2R_12_22950001 chr2R_22950001 RAL-382 1470 chr2R 22957004 22957061 chr2R 22957133 22957190 21 129 7.5 12.0 9.8 1.9 186 chr2R 22957004 intergenic CR44780 - chr2R 22957097 intergenic CR44780 - chr2R 22957190 3` UTR CR44780 - chr2R_21_22955001 chr2R_22955001 RAL-382 1471 chr2R 22967414 22967469 chr2R 22967557 22967612 17 143 4.5 12.0 8.2 1.8 198 chr2R 22967414 intergenic not near genes chr2R 22967513 intergenic not near genes chr2R 22967612 intergenic not near genes chr2R_17_22965001 chr2R_22965001 RAL-382 1472 chr2R 22988264 22988323 chr2R 22988395 22988454 19 125 9.5 10.5 10.0 1.7 190 chr2R 22988264 intron twi + chr2R 22988359 intron twi + chr2R 22988454 intron twi + chr2R_19_22985001 chr2R_22985001 RAL-382 1473 chr2R 23052605 23052674 chr2R 23052731 23052800 32 126 11.0 7.5 9.2 3.1 195 chr2R 23052605 intergenic not near genes chr2R 23052702 intergenic not near genes chr2R 23052800 intergenic not near genes chr2R_32_23050001 chr2R_23050001 RAL-382 1474 chr2R 23061704 23061756 chr2R 23061838 23061923 27 162 11.5 3.5 7.5 3.2 219 chr2R 23061704 3` UTR l(2)06496 - chr2R 23061814 3` UTR l(2)06496 - chr2R 23061923 3` UTR l(2)06496 - chr2R_27_23060001 chr2R_23060001 RAL-382 1475 chr2R 23074853 23074879 chr2R 23074992 23075018 11 139 12.5 28.5 20.5 0.5 165 chr2R 23074853 5` UTR CG3085 + chr2R 23074936 intron CG3085 + chr2R 23075018 intron CG3085 + chr2R_11_23070001 chr2R_23070001 RAL-382 1476 chr2R 23131293 23131369 chr2R 23131445 23131520 25 151 3.5 7.0 5.2 4.0 227 chr2R 23131293 intergenic not near genes chr2R 23131406 intergenic not near genes chr2R 23131520 intergenic not near genes chr2R_25_23130001 chr2R_23130001 RAL-382 1477 chr2R 23174987 23175060 chr2R 23175114 23175186 26 124 6.5 3.0 4.8 4.5 199 chr2R 23174987 intron CG34371 - chr2R 23175086 intron CG34371 - chr2R 23175186 intron CG34371 - chr2R_26_23175001 chr2R_23175001 RAL-382 1478 chr2R 23188511 23188579 chr2R 23188639 23188707 30 126 14.5 11.5 13.0 2.1 196 chr2R 23188511 intron CG34371 - chr2R 23188609 intron CG34371 - chr2R 23188707 intron CG34371 - chr2R_30_23185001 chr2R_23185001 RAL-382 1479 chr2R 23189977 23190004 chr2R 23190107 23190109 9 127 14.5 0.5 7.5 1.1 132 chr2R 23189977 intron CG34371 - chr2R 23190043 intron CG34371 - chr2R 23190109 intron CG34371 - chr2R_9_23190001 chr2R_23190001 RAL-382 1480 chr2R 23236766 23236852 chr2R 23236914 23236996 12 140 2.0 3.5 2.8 3.2 230 chr2R 23236766 intergenic not near genes chr2R 23236881 intergenic not near genes chr2R 23236996 intergenic not near genes chr2R_12_23235001 chr2R_23235001 RAL-382 1481 chr2R 23243156 23243231 chr2R 23243282 23243356 27 125 8.5 7.0 7.8 3.1 200 chr2R 23243156 intergenic not near genes chr2R 23243256 intergenic not near genes chr2R 23243356 intergenic not near genes chr2R_27_23240001 chr2R_23240001 RAL-382 1482 chr2R 23311699 23311721 chr2R 23311867 23311892 6 169 10.5 0.5 5.5 0.9 193 chr2R 23311699 intergenic not near genes chr2R 23311796 intergenic not near genes chr2R 23311892 intergenic not near genes chr2R_6_23310001 chr2R_23310001 RAL-382 1483 chr2R 23311724 23311757 chr2R 23311852 23311895 16 153 7.0 0.0 3.5 3.6 171 chr2R 23311724 intergenic not near genes chr2R 23311810 intergenic not near genes chr2R 23311895 intergenic not near genes chr2R_16_23310001 chr2R_23310001 RAL-382 1484 chr2R 23315342 23315387 chr2R 23315565 23315609 10 216 4.5 7.0 5.8 1.5 267 chr2R 23315342 intergenic not near genes chr2R 23315476 intergenic not near genes chr2R 23315609 intergenic not near genes chr2R_10_23315001 chr2R_23315001 RAL-382 1485 chr2R 23315388 23315407 chr2R 23315559 23315624 4 203 2.5 6.0 4.2 0.8 236 chr2R 23315388 intergenic not near genes chr2R 23315506 intergenic not near genes chr2R 23315624 intergenic not near genes chr2R_4_23315001 chr2R_23315001 RAL-382 1486 chr2R 23348762 23348781 chr2R 23348892 23348911 5 130 19.0 2.0 10.5 0.4 149 chr2R 23348762 intergenic not near genes chr2R 23348836 intergenic not near genes chr2R 23348911 intergenic not near genes chr2R_5_23345001 chr2R_23345001 RAL-382 1487 chr2R 23348793 23348835 chr2R 23348883 23348960 17 123 7.5 3.5 5.5 2.6 167 chr2R 23348793 intergenic not near genes chr2R 23348876 intergenic not near genes chr2R 23348960 intergenic not near genes chr2R_17_23345001 chr2R_23345001 RAL-382 1488 chr2R 23402568 23402636 chr2R 23407691 23407762 flea 50 5126 9.0 11.5 10.2 4.5 5194 chr2R 23402568 intergenic CG3520 - chr2R 23405165 intergenic not near genes chr2R 23407762 intergenic not near genes chr2R_50_23405001 chr2R_23405001 RAL-382 1489 chr2R 23407925 23407996 chr2R 23408218 23408261 26 294 5.5 7.5 6.5 3.5 336 chr2R 23407925 intergenic not near genes chr2R 23408093 intergenic not near genes chr2R 23408261 intergenic not near genes chr2R_26_23405001 chr2R_23405001 RAL-382 1490 chr2R 23437206 23437242 chr2R 23437321 23437323 10 117 6.5 8.5 7.5 1.2 117 chr2R 23437206 intergenic not near genes chr2R 23437264 intergenic not near genes chr2R 23437323 intergenic not near genes chr2R_10_23435001 chr2R_23435001 RAL-382 1491 chr2R 23461115 23461140 chr2R 23461227 23461230 4 110 11.0 15.5 13.2 0.3 115 chr2R 23461115 intron CG43795 + chr2R 23461172 intron CG43795 + chr2R 23461230 intron CG43795 + chr2R_4_23460001 chr2R_23460001 RAL-382 1492 chr2R 23518189 23518219 chr2R 23518270 23518353 13 124 7.0 1.0 4.0 2.6 164 chr2R 23518189 intergenic not near genes chr2R 23518271 intergenic not near genes chr2R 23518353 intergenic not near genes chr2R_13_23515001 chr2R_23515001 RAL-382 1493 chr2R 23519446 23519525 chr2R 23519597 23519676 24 149 5.5 5.5 5.5 3.7 230 chr2R 23519446 intergenic RabX1 - chr2R 23519561 intergenic RabX1 - chr2R 23519676 intergenic RabX1 - chr2R_24_23515001 chr2R_23515001 RAL-382 1494 chr2R 23529530 23529597 chr2R 23537156 23537188 412 14 7620 6.0 6.5 6.2 1.9 7658 chr2R 23529530 exon bw - chr2R 23533359 intron bw - chr2R 23537188 exon bw - chr2R_14_23530001 chr2R_23530001 RAL-382 1495 chr2R 23567604 23567681 chr2R 23567822 23567888 13 207 6.0 9.0 7.5 1.5 284 chr2R 23567604 intron apt + chr2R 23567746 intron apt + chr2R 23567888 intron apt + chr2R_13_23565001 chr2R_23565001 RAL-382 1496 chr2R 23588045 23588068 chr2R 23588173 23588196 11 127 5.0 11.0 8.0 1.2 151 chr2R 23588045 intron apt + chr2R 23588120 intron apt + chr2R 23588196 intron apt + chr2R_11_23585001 chr2R_23585001 RAL-382 1497 chr2R 23606988 23607193 chr2R 23607119 23607336 63 137 0.5 0.5 0.5 42.0 348 chr2R 23606988 intron CG17664 - chr2R 23607162 intron CG17664 - chr2R 23607336 intron CG17664 - chr2R_63_23605001 chr2R_23605001 RAL-382 1498 chr2R 23653946 23653999 chr2R 23654058 23654110 17 121 8.5 10.0 9.2 1.7 164 chr2R 23653946 3` UTR retn + chr2R 23654028 3` UTR retn + chr2R 23654110 3` UTR retn + chr2R_17_23650001 chr2R_23650001 RAL-382 1499 chr2R 23739699 23739729 chr2R 23739825 23739837 6 121 8.0 6.0 7.0 0.8 138 chr2R 23739699 intron egl - chr2R 23739768 intron egl - chr2R 23739837 intron egl - chr2R_6_23735001 chr2R_23735001 RAL-382 1500 chr2R 23747284 23747301 chr2R 23748961 23748978 7 1677 37.5 16.5 27.0 0.2 1694 chr2R 23747284 intergenic CG13560 +,egl - chr2R 23748131 exon CG13560 + chr2R 23748978 intergenic CG12491 -,CG34105 - chr2R_7_23745001 chr2R_23745001 RAL-382 1501 chr2R 23802236 23802300 chr2R 23802389 23802440 10 149 6.0 10.5 8.2 1.1 204 chr2R 23802236 exon CG30177 + chr2R 23802338 3` UTR CG30177 + chr2R 23802440 3` UTR CG30177 + chr2R_10_23800001 chr2R_23800001 RAL-382 1502 chr2R 23824136 23824168 chr2R 23824272 23824309 12 141 3.5 16.5 10.0 1.1 173 chr2R 23824136 intron,intron CG5549 +,CG4763 - chr2R 23824222 intron,intron CG5549 +,CG4763 - chr2R 23824309 intron,intron CG5549 +,CG4763 - chr2R_12_23820001 chr2R_23820001 RAL-382 1503 chr2R 23914255 23914326 chr2R 23921929 23921978 412 25 7672 7.5 7.5 7.5 2.9 7723 chr2R 23914255 exon kcc + chr2R 23918116 intron kcc + chr2R 23921978 exon kcc + chr2R_25_23915001 chr2R_23915001 RAL-382 1504 chr2R 23986483 23986538 chr2R 23986613 23986668 29 129 8.5 14.5 11.5 2.3 185 chr2R 23986483 intron Phm - chr2R 23986576 intron Phm - chr2R 23986668 intron,5` UTR Phm -,CG30178 + chr2R_29_23985001 chr2R_23985001 RAL-382 1505 chr2R 24031358 24031406 chr2R 24031471 24031540 31 131 8.0 14.0 11.0 2.6 182 chr2R 24031358 5` UTR CG30172 - chr2R 24031449 intergenic CG30172 -,Chi - chr2R 24031540 3` UTR Chi - chr2R_31_24030001 chr2R_24030001 RAL-382 1506 chr2R 24045826 24045899 chr2R 24045960 24046033 29 133 7.0 7.5 7.2 3.5 207 chr2R 24045826 intron tsr - chr2R 24045930 intron tsr - chr2R 24046033 intron tsr - chr2R_29_24045001 chr2R_24045001 RAL-382 1507 chr2R 24147021 24147095 chr2R 24154649 24154698 412 31 7625 5.0 5.5 5.2 5.0 7677 chr2R 24147021 intron Dat + chr2R 24150860 intron Dat + chr2R 24154698 intron Dat + chr2R_31_24150001 chr2R_24150001 RAL-382 1508 chr2R 24177190 24177259 chr2R 24184725 24184794 412 42 7535 10.5 13.0 11.8 3.3 7604 chr2R 24177190 3` UTR Nop60B + chr2R 24180992 intron Nop60B + chr2R 24184794 intron Nop60B + chr2R_42_24180001 chr2R_24180001 RAL-382 1509 chr2R 24278296 24278336 chr2R 24278409 24278445 17 126 3.5 8.0 5.8 2.5 149 chr2R 24278296 intron nvy + chr2R 24278370 intron nvy + chr2R 24278445 intron nvy + chr2R_17_24275001 chr2R_24275001 RAL-382 1510 chr2R 24282253 24282330 chr2R 24282393 24282470 31 137 4.5 11.5 8.0 3.4 217 chr2R 24282253 intron nvy + chr2R 24282362 intron nvy + chr2R 24282470 intron nvy + chr2R_31_24280001 chr2R_24280001 RAL-382 1511 chr2R 24292505 24292534 chr2R 24292623 24292669 9 125 2.5 8.5 5.5 1.4 164 chr2R 24292505 intergenic not near genes chr2R 24292587 intergenic not near genes chr2R 24292669 intergenic not near genes chr2R_9_24290001 chr2R_24290001 RAL-382 1512 chr2R 24321090 24321165 chr2R 24321235 24321312 22 144 8.5 4.5 6.5 2.9 222 chr2R 24321090 intergenic not near genes chr2R 24321201 intergenic not near genes chr2R 24321312 intergenic not near genes chr2R_22_24320001 chr2R_24320001 RAL-382 1513 chr2R 24352572 24352588 chr2R 24352696 24352716 9 127 14.5 11.5 13.0 0.6 144 chr2R 24352572 intron,intron bs +,CR44811 - chr2R 24352644 intron,intron bs +,CR44811 - chr2R 24352716 intron,intron bs +,CR44811 - chr2R_9_24350001 chr2R_24350001 RAL-382 1514 chr2R 24352590 24352593 chr2R 24352694 24352704 4 110 13.0 11.0 12.0 0.3 114 chr2R 24352590 intron,intron bs +,CR44811 - chr2R 24352647 intron,intron bs +,CR44811 - chr2R 24352704 intron,intron bs +,CR44811 - chr2R_4_24350001 chr2R_24350001 RAL-382 1515 chr2R 24353384 24353417 chr2R 24361796 24361829 roo 17 8412 21.0 9.0 15.0 1.1 8445 chr2R 24353384 intron,intron bs +,CR44811 - chr2R 24357606 intron,intron bs +,CR44811 - chr2R 24361829 intron,intron bs +,CR44811 - chr2R_17_24355001 chr2R_24355001 RAL-382 1516 chr2R 24430887 24430942 chr2R 24431025 24431080 14 138 0.0 13.5 6.8 1.8 193 chr2R 24430887 intergenic CG15873 -,Pgam5-2 - chr2R 24430984 intergenic CG15873 -,Pgam5-2 - chr2R 24431080 intergenic Pgam5-2 -,CG15873 - chr2R_14_24430001 chr2R_24430001 RAL-382 1517 chr2R 24449872 24449950 chr2R 24450006 24450084 10 133 9.0 3.0 6.0 1.4 212 chr2R 24449872 intergenic not near genes chr2R 24449978 intergenic not near genes chr2R 24450084 intergenic not near genes chr2R_10_24445001 chr2R_24445001 RAL-382 1518 chr2R 24509687 24509750 chr2R 24509822 24509885 26 132 9.0 11.0 10.0 2.4 198 chr2R 24509687 3` UTR Letm1 - chr2R 24509786 3` UTR Letm1 - chr2R 24509885 3` UTR Letm1 - chr2R_26_24505001 chr2R_24505001 RAL-382 1519 chr2R 24590072 24590099 chr2R 24590214 24590229 11 140 13.0 5.5 9.2 1.1 157 chr2R 24590072 intron pio + chr2R 24590150 intron pio + chr2R 24590229 intron pio + chr2R_11_24590001 chr2R_24590001 RAL-382 1520 chr2R 24590100 24590122 chr2R 24590207 24590254 8 129 8.0 5.0 6.5 1.1 154 chr2R 24590100 intron pio + chr2R 24590177 intron pio + chr2R 24590254 intron pio + chr2R_8_24590001 chr2R_24590001 RAL-382 1521 chr2R 24590124 24590133 chr2R 24590206 24590254 5 122 5.5 5.0 5.2 0.8 130 chr2R 24590124 intron pio + chr2R 24590189 intron pio + chr2R 24590254 intron pio + chr2R_5_24590001 chr2R_24590001 RAL-382 1522 chr2R 24590137 24590142 chr2R 24590204 24590264 4 110 3.5 5.0 4.2 0.8 127 chr2R 24590137 intron pio + chr2R 24590200 intron pio + chr2R 24590264 intron pio + chr2R_4_24590001 chr2R_24590001 RAL-382 1523 chr2R 24633976 24634015 chr2R 24634082 24634146 14 126 6.0 9.5 7.8 1.6 170 chr2R 24633976 intron CG13594 - chr2R 24634061 intron CG13594 - chr2R 24634146 intron CG13594 - chr2R_14_24630001 chr2R_24630001 RAL-382 1524 chr2R 24636856 24636881 chr2R 24636992 24637017 10 134 17.5 0.0 8.8 1.0 161 chr2R 24636856 intron CG13594 - chr2R 24636936 intron CG13594 - chr2R 24637017 intron CG13594 - chr2R_10_24635001 chr2R_24635001 RAL-382 1525 chr2R 24647547 24647568 chr2R 24655168 24655189 412 6 7621 8.5 8.0 8.2 0.7 7642 chr2R 24647547 intergenic not near genes chr2R 24651368 intergenic not near genes chr2R 24655189 intergenic not near genes chr2R_6_24650001 chr2R_24650001 RAL-382 1526 chr2R 24647569 24647612 chr2R 24655155 24655219 412 6 7606 0.0 5.5 2.8 1.6 7650 chr2R 24647569 intergenic not near genes chr2R 24651394 intergenic not near genes chr2R 24655219 intergenic not near genes chr2R_6_24650001 chr2R_24650001 RAL-382 1527 chr2R 24687596 24687646 chr2R 24687731 24687781 19 132 7.5 10.5 9.0 1.9 185 chr2R 24687596 intergenic Mmp1 - chr2R 24687688 intergenic Mmp1 - chr2R 24687781 intergenic Mmp1 - chr2R_19_24685001 chr2R_24685001 RAL-382 1528 chr2R 24727841 24727913 chr2R 24735399 24735437 mdg1 19 7550 6.0 11.0 8.5 2.0 7596 chr2R 24727841 intron Mid1 - chr2R 24731639 intron Mid1 - chr2R 24735437 intron Mid1 - chr2R_19_24730001 chr2R_24730001 RAL-382 1529 chr2R 24763595 24763637 chr2R 24765596 24765647 G2 17 2016 4.5 9.0 6.8 2.2 2052 chr2R 24763595 exon CG3894 + chr2R 24764621 intron CG3894 + chr2R 24765647 exon CG3894 + chr2R_17_24760001 chr2R_24760001 RAL-382 1530 chr2R 24799134 24799150 chr2R 24799827 24799828 8 691 14.0 9.5 11.8 0.6 694 chr2R 24799134 exon CG3611 + chr2R 24799481 3` UTR CG3611 + chr2R 24799828 3` UTR CG3611 + chr2R_8_24795001 chr2R_24795001 RAL-382 1531 chr2R 24799152 24799197 chr2R 24799825 24799873 17 689 8.0 8.0 8.0 1.9 721 chr2R 24799152 exon CG3611 + chr2R 24799512 3` UTR CG3611 + chr2R 24799873 3` UTR CG3611 + chr2R_17_24795001 chr2R_24795001 RAL-382 1532 chr2R 24846425 24846443 chr2R 24846548 24846576 4 127 20.0 10.0 15.0 0.2 151 chr2R 24846425 intergenic not near genes chr2R 24846500 intergenic not near genes chr2R 24846576 intergenic not near genes chr2R_4_24845001 chr2R_24845001 RAL-382 1533 chr2R 24859792 24859867 chr2R 24859927 24860003 30 128 4.0 2.0 3.0 7.5 211 chr2R 24859792 5` UTR CR44829 + chr2R 24859898 5` UTR CR44829 + chr2R 24860003 5` UTR CR44829 + chr2R_30_24855001 chr2R_24855001 RAL-382 1534 chr2R 24884003 24884079 chr2R 24884135 24884211 43 132 10.0 6.0 8.0 4.8 208 chr2R 24884003 intron NKAIN + chr2R 24884107 intron NKAIN + chr2R 24884211 intron NKAIN + chr2R_43_24880001 chr2R_24880001 RAL-382 1535 chr2R 25014527 25014567 chr2R 25014621 25014690 6 116 8.0 8.5 8.2 0.7 163 chr2R 25014527 intron uzip + chr2R 25014608 intron uzip + chr2R 25014690 intron uzip + chr2R_6_25010001 chr2R_25010001 RAL-382 1536 chr2R 25018296 25018359 chr2R 25018447 25018510 22 150 7.0 10.0 8.5 2.3 214 chr2R 25018296 intron uzip + chr2R 25018403 intron uzip + chr2R 25018510 intron uzip + chr2R_22_25015001 chr2R_25015001 RAL-382 1537 chr2R 25022602 25022666 chr2R 25022725 25022800 37 133 6.5 7.0 6.8 4.7 198 chr2R 25022602 intron uzip + chr2R 25022701 intron uzip + chr2R 25022800 intron uzip + chr2R_37_25020001 chr2R_25020001 RAL-382 1538 chr2R 25076056 25076187 chr2R 25076403 25076476 26 342 102.0 82.5 92.2 0.3 420 chr2R 25076056 intron gol - chr2R 25076266 intron gol - chr2R 25076476 intron gol - chr2R_26_25075001 chr2R_25075001 RAL-382 1539 chr2R 25081561 25081587 chr2R 25082707 25082733 8 1145 14.5 8.0 11.2 0.7 1172 chr2R 25081561 intron gol - chr2R 25082147 intron gol - chr2R 25082733 intron gol - chr2R_8_25080001 chr2R_25080001 RAL-382 1540 chr2R 25081591 25081626 chr2R 25082706 25082772 14 1137 9.0 8.0 8.5 1.5 1181 chr2R 25081591 intron gol - chr2R 25082182 intron gol - chr2R 25082772 intron gol - chr2R_14_25080001 chr2R_25080001 RAL-382 1541 chr2R 25101233 25101298 chr2R 25101381 25101450 20 150 7.5 6.0 6.8 2.6 217 chr2R 25101233 intron lov - chr2R 25101342 intron lov - chr2R 25101450 intron lov - chr2R_20_25100001 chr2R_25100001 RAL-382 1542 chr2R 25104738 25104806 chr2R 25104913 25104960 22 170 7.5 7.5 7.5 2.6 222 chr2R 25104738 intron lov - chr2R 25104849 intron lov - chr2R 25104960 intron lov - chr2R_22_25100001 chr2R_25100001 RAL-382 1543 chr2R 25141611 25141653 chr2R 25159351 25159393 roo 21 17740 20.5 11.0 15.8 1.2 17782 chr2R 25141611 intergenic not near genes chr2R 25150502 intergenic not near genes chr2R 25159393 intergenic not near genes chr2R_21_25150001 chr2R_25150001 RAL-382 1544 chr2R 25141654 25141677 chr2R 25159340 25159417 roo 13 17736 13.0 10.5 11.8 1.0 17763 chr2R 25141654 intergenic not near genes chr2R 25150536 intergenic not near genes chr2R 25159417 intergenic not near genes chr2R_13_25150001 chr2R_25150001 RAL-382 1545 chr2R 25172367 25172427 chr2R 25176408 25176473 14 4042 63.5 26.0 44.8 0.3 4106 chr2R 25172367 3` UTR Sfp60F - chr2R 25174420 intergenic PebII - chr2R 25176473 exon Peb - chr2R_14_25170001 chr2R_25170001 RAL-382 1546 chr2R 25193292 25193370 chr2R 25193483 25193564 29 193 11.5 4.0 7.8 3.3 272 chr2R 25193292 intron CG9380 - chr2R 25193428 intron CG9380 - chr2R 25193564 intron CG9380 - chr2R_29_25190001 chr2R_25190001 RAL-382 1547 chr2R 25253410 25253472 chr2R 25253536 25253599 13 125 9.0 14.5 11.8 1.0 189 chr2R 25253410 intron,intron CG9380 -,CG30428 + chr2R 25253504 intron,intron CG9380 -,CG30428 + chr2R 25253599 intron,5` UTR CG9380 -,CG30428 + chr2R_13_25250001 chr2R_25250001 RAL-382 1548 chr3L 52864 52937 chr3L 52998 53049 33 131 9.5 11.5 10.5 2.9 185 chr3L 52864 intergenic not near genes chr3L 52956 intergenic not near genes chr3L 53049 intergenic not near genes chr3L_33_50001 chr3L_50001 RAL-382 1549 chr3L 68934 69010 chr3L 69071 69132 37 135 7.0 7.5 7.2 4.5 198 chr3L 68934 3` UTR Lsp1gamma + chr3L 69033 intergenic Lsp1gamma +,CR44510 + chr3L 69132 intergenic CR44510 +,Lsp1gamma + chr3L_37_65001 chr3L_65001 RAL-382 1550 chr3L 86806 86810 chr3L 88701 88705 4 1895 47.0 53.5 50.2 0.1 1899 chr3L 86806 intergenic not near genes chr3L 87756 intergenic not near genes chr3L 88705 intergenic not near genes chr3L_4_85001 chr3L_85001 RAL-382 1551 chr3L 88736 88743 chr3L 90680 90713 4 1964 26.0 10.5 18.2 0.2 1977 chr3L 88736 intergenic not near genes chr3L 89724 intergenic not near genes chr3L 90713 intergenic not near genes chr3L_4_85001 chr3L_85001 RAL-382 1552 chr3L 110169 110230 chr3L 119386 119446 roo 30 9216 14.0 11.0 12.5 2.2 9277 chr3L 110169 intergenic not near genes chr3L 114808 intergenic not near genes chr3L 119446 intergenic not near genes chr3L_30_110001 chr3L_110001 RAL-382 1553 chr3L 233225 233291 chr3L 233362 233428 34 135 7.0 12.5 9.8 3.1 203 chr3L 233225 exon CG34453 - chr3L 233326 exon CG34453 - chr3L 233428 intergenic CG34453 -,E(bx) - chr3L_34_230001 chr3L_230001 RAL-382 1554 chr3L 277955 278025 chr3L 278085 278155 42 129 10.5 11.0 10.8 3.6 200 chr3L 277955 intron RhoGEF3 + chr3L 278055 intron RhoGEF3 + chr3L 278155 intron RhoGEF3 + chr3L_42_275001 chr3L_275001 RAL-382 1555 chr3L 386071 386139 chr3L 386201 386254 16 129 8.0 10.0 9.0 1.6 183 chr3L 386071 intron trh - chr3L 386162 intron trh - chr3L 386254 intron trh - chr3L_16_385001 chr3L_385001 RAL-382 1556 chr3L 390912 390986 chr3L 391066 391142 29 155 4.5 6.0 5.2 4.7 230 chr3L 390912 intron trh - chr3L 391027 intron trh - chr3L 391142 intron trh - chr3L_29_390001 chr3L_390001 RAL-382 1557 chr3L 402658 402668 chr3L 409761 409770 297 4 7103 11.5 11.5 11.5 0.3 7112 chr3L 402658 intergenic not near genes chr3L 406214 intergenic not near genes chr3L 409770 intergenic not near genes chr3L_4_405001 chr3L_405001 RAL-382 1558 chr3L 402670 402714 chr3L 409742 409802 297 23 7093 5.0 8.0 6.5 3.1 7132 chr3L 402670 intergenic not near genes chr3L 406236 intergenic not near genes chr3L 409802 intergenic not near genes chr3L_23_405001 chr3L_405001 RAL-382 1559 chr3L 421004 421073 chr3L 421150 421219 21 143 8.5 4.0 6.2 2.9 215 chr3L 421004 intergenic not near genes chr3L 421112 intergenic not near genes chr3L 421219 intergenic not near genes chr3L_21_420001 chr3L_420001 RAL-382 1560 chr3L 445526 445578 chr3L 445652 445707 9 128 3.0 9.0 6.0 1.3 181 chr3L 445526 exon klar - chr3L 445616 intron klar - chr3L 445707 intron klar - chr3L_9_445001 chr3L_445001 RAL-382 1561 chr3L 456984 457045 chr3L 457112 457173 23 127 4.5 3.5 4.0 4.6 189 chr3L 456984 intron klar - chr3L 457078 intron klar - chr3L 457173 intron klar - chr3L_23_455001 chr3L_455001 RAL-382 1562 chr3L 459927 459998 chr3L 460054 460110 39 125 16.0 9.0 12.5 2.9 183 chr3L 459927 intron klar - chr3L 460018 intron klar - chr3L 460110 intron klar - chr3L_39_460001 chr3L_460001 RAL-382 1563 chr3L 467391 467624 chr3L 467517 467715 55 124 7.5 7.0 7.2 6.7 324 chr3L 467391 intron klar - chr3L 467553 intron klar - chr3L 467715 intron klar - chr3L_55_465001 chr3L_465001 RAL-382 1564 chr3L 517414 517417 chr3L 518233 518236 5 819 0.0 20.0 10.0 0.5 822 chr3L 517414 intron klar - chr3L 517825 intron klar - chr3L 518236 intron klar - chr3L_5_515001 chr3L_515001 RAL-382 1565 chr3L 563926 563996 chr3L 564155 564224 29 228 10.5 11.0 10.8 2.5 298 chr3L 563926 intron hipk + chr3L 564075 intron hipk + chr3L 564224 intron hipk + chr3L_29_560001 chr3L_560001 RAL-382 1566 chr3L 611324 611391 chr3L 611454 611528 28 136 6.5 10.5 8.5 2.9 204 chr3L 611324 intergenic not near genes chr3L 611426 intergenic not near genes chr3L 611528 intergenic not near genes chr3L_28_610001 chr3L_610001 RAL-382 1567 chr3L 618390 618441 chr3L 618565 618616 25 175 8.5 7.0 7.8 2.8 226 chr3L 618390 intergenic not near genes chr3L 618503 intergenic not near genes chr3L 618616 intergenic not near genes chr3L_25_615001 chr3L_615001 RAL-382 1568 chr3L 643824 643829 chr3L 21448026 21448027 4 20804200 38.0 37.5 37.8 0.1 20804203 chr3L 643824 5` UTR CR43334 + chr3L 11045926 intron CG43693 - chr3L 21448027 3` UTR Syx7 + chr3L_4_11045001 chr3L_11045001 RAL-382 1569 chr3L 661300 661334 chr3L 661425 661451 6 125 5.5 7.0 6.2 0.8 151 chr3L 661300 intergenic not near genes chr3L 661376 intergenic not near genes chr3L 661451 intergenic not near genes chr3L_6_660001 chr3L_660001 RAL-382 1570 chr3L 662888 662944 chr3L 663010 663037 13 120 6.5 7.5 7.0 1.6 149 chr3L 662888 intergenic not near genes chr3L 662962 intergenic not near genes chr3L 663037 intergenic not near genes chr3L_13_660001 chr3L_660001 RAL-382 1571 chr3L 665817 665829 chr3L 665950 665962 9 132 20.0 9.0 14.5 0.6 145 chr3L 665817 intergenic not near genes chr3L 665890 intergenic not near genes chr3L 665962 intergenic not near genes chr3L_9_665001 chr3L_665001 RAL-382 1572 chr3L 665833 665885 chr3L 665949 666005 21 128 9.0 9.0 9.0 2.1 172 chr3L 665833 intergenic not near genes chr3L 665919 intergenic not near genes chr3L 666005 intergenic not near genes chr3L_21_665001 chr3L_665001 RAL-382 1573 chr3L 704270 704275 chr3L 704410 704410 5 139 8.5 9.0 8.8 0.5 140 chr3L 704270 intergenic not near genes chr3L 704340 intergenic not near genes chr3L 704410 intergenic not near genes chr3L_5_700001 chr3L_700001 RAL-382 1574 chr3L 780586 780661 chr3L 780722 780797 22 134 5.0 6.5 5.8 3.2 211 chr3L 780586 intergenic not near genes chr3L 780692 intergenic not near genes chr3L 780797 intergenic not near genes chr3L_22_780001 chr3L_780001 RAL-382 1575 chr3L 789869 789931 chr3L 790404 790466 roo 17 533 9.5 8.5 9.0 1.7 597 chr3L 789869 intergenic not near genes chr3L 790168 intergenic not near genes chr3L 790466 intergenic not near genes chr3L_17_790001 chr3L_790001 RAL-382 1576 chr3L 857972 858025 chr3L 866483 866550 Tirant 11 8516 7.5 10.0 8.8 1.1 8578 chr3L 857972 intergenic not near genes chr3L 862261 intergenic not near genes chr3L 866550 5` UTR CG12502 + chr3L_11_860001 chr3L_860001 RAL-382 1577 chr3L 905025 905089 chr3L 905157 905223 12 134 2.0 8.0 5.0 2.0 198 chr3L 905025 intergenic not near genes chr3L 905124 intergenic not near genes chr3L 905223 intergenic not near genes chr3L_12_905001 chr3L_905001 RAL-382 1578 chr3L 925130 925197 chr3L 932606 932627 mdg1 31 7473 6.5 10.0 8.2 3.4 7497 chr3L 925130 intron Glut1 + chr3L 928878 intron Glut1 + chr3L 932627 intron Glut1 + chr3L_31_925001 chr3L_925001 RAL-382 1579 chr3L 933862 933932 chr3L 934016 934085 25 153 8.5 7.0 7.8 2.8 223 chr3L 933862 intron Glut1 + chr3L 933974 intron Glut1 + chr3L 934085 intron Glut1 + chr3L_25_930001 chr3L_930001 RAL-382 1580 chr3L 935120 935149 chr3L 935547 935598 5 441 6.0 3.5 4.8 0.9 478 chr3L 935120 intron Glut1 + chr3L 935359 intron Glut1 + chr3L 935598 intron Glut1 + chr3L_5_935001 chr3L_935001 RAL-382 1581 chr3L 939734 939789 chr3L 940904 940960 jockey 19 1168 6.0 11.5 8.8 1.9 1226 chr3L 939734 intron Glut1 + chr3L 940347 intron Glut1 + chr3L 940960 intron Glut1 + chr3L_19_940001 chr3L_940001 RAL-382 1582 chr3L 949865 949881 chr3L 949991 950007 8 126 0.0 3.5 1.8 2.9 142 chr3L 949865 intron Glut1 + chr3L 949936 intron Glut1 + chr3L 950007 intron Glut1 + chr3L_8_945001 chr3L_945001 RAL-382 1583 chr3L 976521 976571 chr3L 976697 976747 26 175 6.5 13.0 9.8 2.4 226 chr3L 976521 intron Glut1 + chr3L 976634 intron Glut1 + chr3L 976747 intron Glut1 + chr3L_26_975001 chr3L_975001 RAL-382 1584 chr3L 1031541 1031614 chr3L 1031666 1031688 15 106 9.5 7.5 8.5 1.6 147 chr3L 1031541 intron trio - chr3L 1031614 intron trio - chr3L 1031688 intron trio - chr3L_15_1030001 chr3L_1030001 RAL-382 1585 chr3L 1040499 1040541 chr3L 1040633 1040675 21 131 13.5 8.0 10.8 1.8 176 chr3L 1040499 intron bab1 - chr3L 1040587 intron bab1 - chr3L 1040675 intron bab1 - chr3L_21_1040001 chr3L_1040001 RAL-382 1586 chr3L 1040550 1040561 chr3L 1040635 1040695 5 124 10.0 8.0 9.0 0.5 145 chr3L 1040550 intron bab1 - chr3L 1040622 intron bab1 - chr3L 1040695 intron bab1 - chr3L_5_1040001 chr3L_1040001 RAL-382 1587 chr3L 1047317 1047340 chr3L 1055168 1055195 412 5 7858 19.5 10.5 15.0 0.3 7878 chr3L 1047317 intron bab1 - chr3L 1051256 intron bab1 - chr3L 1055195 intron bab1 - chr3L_5_1050001 chr3L_1050001 RAL-382 1588 chr3L 1047341 1047385 chr3L 1055167 1055190 412 22 7841 9.5 10.5 10.0 2.0 7849 chr3L 1047341 intron bab1 - chr3L 1051266 intron bab1 - chr3L 1055190 intron bab1 - chr3L_22_1050001 chr3L_1050001 RAL-382 1589 chr3L 1145192 1145268 chr3L 1145321 1145400 19 128 7.0 0.0 3.5 4.2 208 chr3L 1145192 intron bab2 - chr3L 1145296 intron bab2 - chr3L 1145400 intron bab2 - chr3L_19_1145001 chr3L_1145001 RAL-382 1590 chr3L 1154079 1154159 chr3L 1163282 1163359 roo 27 9200 9.0 9.0 9.0 2.7 9280 chr3L 1154079 intron bab2 - chr3L 1158719 intron bab2 - chr3L 1163359 intron bab2 - chr3L_27_1155001 chr3L_1155001 RAL-382 1591 chr3L 1166976 1166981 chr3L 1167103 1167108 4 127 14.5 5.5 10.0 0.4 132 chr3L 1166976 intron bab2 - chr3L 1167042 intron bab2 - chr3L 1167108 intron bab2 - chr3L_4_1165001 chr3L_1165001 RAL-382 1592 chr3L 1166982 1167007 chr3L 1167099 1167134 8 126 9.0 5.5 7.2 1.0 152 chr3L 1166982 intron bab2 - chr3L 1167058 intron bab2 - chr3L 1167134 intron bab2 - chr3L_8_1165001 chr3L_1165001 RAL-382 1593 chr3L 1182807 1182811 chr3L 1182957 1182961 6 150 7.0 0.0 3.5 1.3 154 chr3L 1182807 intergenic not near genes chr3L 1182884 intergenic not near genes chr3L 1182961 intergenic not near genes chr3L_6_1180001 chr3L_1180001 RAL-382 1594 chr3L 1215453 1215502 chr3L 1215703 1215726 17 243 16.5 5.0 10.8 1.4 273 chr3L 1215453 intron mwh + chr3L 1215590 intron mwh + chr3L 1215726 intron mwh + chr3L_17_1215001 chr3L_1215001 RAL-382 1595 chr3L 1215514 1215531 chr3L 1215762 1215765 7 246 10.0 20.5 15.2 0.4 251 chr3L 1215514 intron mwh + chr3L 1215640 intron mwh + chr3L 1215765 intron mwh + chr3L_7_1215001 chr3L_1215001 RAL-382 1596 chr3L 1219548 1219608 chr3L 1227329 1227391 412 24 7782 7.0 8.5 7.8 2.7 7843 chr3L 1219548 intron mwh + chr3L 1223470 intron mwh + chr3L 1227391 intron mwh + chr3L_24_1220001 chr3L_1220001 RAL-382 1597 chr3L 1236188 1236233 chr3L 1236315 1236360 16 126 4.5 0.0 2.2 5.0 172 chr3L 1236188 intron CG9194 + chr3L 1236274 intron CG9194 + chr3L 1236360 intron CG9194 + chr3L_16_1235001 chr3L_1235001 RAL-382 1598 chr3L 1257622 1257652 chr3L 1257741 1257782 16 129 0.0 16.5 8.2 1.7 160 chr3L 1257622 intron CG9134 + chr3L 1257702 intron CG9134 + chr3L 1257782 intron CG9134 + chr3L_16_1255001 chr3L_1255001 RAL-382 1599 chr3L 1277987 1278011 chr3L 1278157 1278181 11 169 10.5 8.0 9.2 1.1 194 chr3L 1277987 intron CG32333 + chr3L 1278084 intron CG32333 + chr3L 1278181 intron CG32333 + chr3L_11_1275001 chr3L_1275001 RAL-382 1600 chr3L 1278021 1278058 chr3L 1278156 1278227 22 164 6.5 8.0 7.2 2.7 206 chr3L 1278021 intron CG32333 + chr3L 1278124 intron CG32333 + chr3L 1278227 intron CG32333 + chr3L_22_1275001 chr3L_1275001 RAL-382 1601 chr3L 1350895 1350923 chr3L 1351037 1351065 14 142 17.0 16.0 16.5 0.8 170 chr3L 1350895 intron Ptp61F - chr3L 1350980 intron Ptp61F - chr3L 1351065 intron Ptp61F - chr3L_14_1350001 chr3L_1350001 RAL-382 1602 chr3L 1374393 1374396 chr3L 1374520 1374523 6 127 22.5 11.5 17.0 0.3 130 chr3L 1374393 intron,intron Ptp61F -,ru + chr3L 1374458 intron,intron Ptp61F -,ru + chr3L 1374523 intron,intron Ptp61F -,ru + chr3L_6_1370001 chr3L_1370001 RAL-382 1603 chr3L 1385134 1385194 chr3L 1385261 1385344 14 140 7.0 0.0 3.5 3.1 210 chr3L 1385134 intron,intron Ptp61F -,ru + chr3L 1385239 intron,intron Ptp61F -,ru + chr3L 1385344 intron,intron Ptp61F -,ru + chr3L_14_1385001 chr3L_1385001 RAL-382 1604 chr3L 1415732 1415791 chr3L 1415859 1415918 15 128 5.0 8.0 6.5 2.0 186 chr3L 1415732 intron Ptp61F - chr3L 1415825 intron Ptp61F - chr3L 1415918 intron Ptp61F - chr3L_15_1415001 chr3L_1415001 RAL-382 1605 chr3L 1424760 1424769 chr3L 1430048 1430060 Rt1a 4 5293 0.0 9.5 4.8 0.7 5300 chr3L 1424760 intron Ptp61F - chr3L 1427410 intron Ptp61F - chr3L 1430060 intron Ptp61F - chr3L_4_1425001 chr3L_1425001 RAL-382 1606 chr3L 1463373 1463448 chr3L 1463504 1463548 18 123 1.5 5.5 3.5 4.0 175 chr3L 1463373 intron Ptp61F - chr3L 1463460 intron Ptp61F - chr3L 1463548 intron Ptp61F - chr3L_18_1460001 chr3L_1460001 RAL-382 1607 chr3L 1468458 1468467 chr3L 1468598 1468607 4 140 25.0 2.5 13.8 0.3 149 chr3L 1468458 intron,3` UTR Ptp61F -,rho + chr3L 1468532 intron,3` UTR Ptp61F -,rho + chr3L 1468607 intron,3` UTR Ptp61F -,rho + chr3L_4_1465001 chr3L_1465001 RAL-382 1608 chr3L 1477344 1477366 chr3L 1477484 1477506 12 140 3.0 0.0 1.5 4.8 162 chr3L 1477344 intron stet - chr3L 1477425 intron stet - chr3L 1477506 intron stet - chr3L_12_1475001 chr3L_1475001 RAL-382 1609 chr3L 1480949 1481023 chr3L 1481074 1481112 16 124 5.0 9.0 7.0 2.0 163 chr3L 1480949 intron stet - chr3L 1481030 intron stet - chr3L 1481112 intron stet - chr3L_16_1480001 chr3L_1480001 RAL-382 1610 chr3L 1485692 1485730 chr3L 1486909 1486947 1360 8 1215 9.5 14.0 11.8 0.6 1255 chr3L 1485692 intron stet - chr3L 1486320 intron stet - chr3L 1486947 intron stet - chr3L_8_1485001 chr3L_1485001 RAL-382 1611 chr3L 1505964 1506028 chr3L 1513599 1513672 17.6 20 7645 6.5 8.0 7.2 2.4 7708 chr3L 1505964 intron,intron Psa +,cue - chr3L 1509818 intron,intron Psa +,cue - chr3L 1513672 intron,intron Psa +,cue - chr3L_20_1505001 chr3L_1505001 RAL-382 1612 chr3L 1564414 1564468 chr3L 1564716 1564786 14 313 0.0 7.5 3.8 2.9 372 chr3L 1564414 intron CG7879 - chr3L 1564600 intron CG7879 - chr3L 1564786 intron CG7879 - chr3L_14_1560001 chr3L_1560001 RAL-382 1613 chr3L 1569471 1569529 chr3L 1569597 1569655 25 119 7.0 15.5 11.2 2.0 184 chr3L 1569471 5` UTR CG12004 + chr3L 1569563 intron CG12004 + chr3L 1569655 intron CG12004 + chr3L_25_1565001 chr3L_1565001 RAL-382 1614 chr3L 1584109 1584116 chr3L 1584240 1584248 5 132 0.0 15.5 7.8 0.6 139 chr3L 1584109 intron CG13917 + chr3L 1584178 intron CG13917 + chr3L 1584248 intron CG13917 + chr3L_5_1580001 chr3L_1580001 RAL-382 1615 chr3L 1584119 1584125 chr3L 1584222 1584257 8 128 0.0 11.0 5.5 1.2 138 chr3L 1584119 intron CG13917 + chr3L 1584188 intron CG13917 + chr3L 1584257 intron CG13917 + chr3L_8_1580001 chr3L_1580001 RAL-382 1616 chr3L 1585875 1585934 chr3L 1586008 1586067 20 133 8.0 2.5 5.2 3.2 192 chr3L 1585875 intron CG13917 + chr3L 1585971 intron CG13917 + chr3L 1586067 intron CG13917 + chr3L_20_1585001 chr3L_1585001 RAL-382 1617 chr3L 1673549 1673592 chr3L 1673676 1673704 11 123 13.0 8.5 10.8 0.9 155 chr3L 1673549 intergenic not near genes chr3L 1673626 intergenic not near genes chr3L 1673704 intergenic not near genes chr3L_11_1670001 chr3L_1670001 RAL-382 1618 chr3L 1688199 1688260 chr3L 1688377 1688439 16 178 7.5 5.5 6.5 2.1 240 chr3L 1688199 intron CG7991 + chr3L 1688319 intron CG7991 + chr3L 1688439 intron CG7991 + chr3L_16_1685001 chr3L_1685001 RAL-382 1619 chr3L 1728491 1728551 chr3L 1728601 1728666 30 132 10.0 13.0 11.5 2.4 175 chr3L 1728491 intron drpr - chr3L 1728578 intron drpr - chr3L 1728666 intron drpr - chr3L_30_1725001 chr3L_1725001 RAL-382 1620 chr3L 1740817 1740823 chr3L 1741105 1741116 pogo 4 290 27.0 15.5 21.2 0.2 299 chr3L 1740817 intron Gk + chr3L 1740966 intron Gk + chr3L 1741116 intron Gk + chr3L_4_1740001 chr3L_1740001 RAL-382 1621 chr3L 1740824 1740849 chr3L 1741104 1741118 pogo 12 281 18.0 15.0 16.5 0.7 294 chr3L 1740824 intron Gk + chr3L 1740971 intron Gk + chr3L 1741118 intron Gk + chr3L_12_1740001 chr3L_1740001 RAL-382 1622 chr3L 1740850 1740883 chr3L 1741096 1741175 pogo 14 277 10.5 12.5 11.5 1.1 325 chr3L 1740850 intron Gk + chr3L 1741012 intron Gk + chr3L 1741175 intron Gk + chr3L_14_1740001 chr3L_1740001 RAL-382 1623 chr3L 1805648 1805711 chr3L 1805872 1805935 13 224 4.5 5.5 5.0 2.2 287 chr3L 1805648 exon CG42676 + chr3L 1805792 intron CG42676 + chr3L 1805935 intron CG42676 + chr3L_13_1805001 chr3L_1805001 RAL-382 1624 chr3L 1809954 1810027 chr3L 1810195 1810267 16 240 5.0 7.5 6.2 2.2 313 chr3L 1809954 intergenic not near genes chr3L 1810110 intergenic GV1 + chr3L 1810267 intergenic GV1 + chr3L_16_1810001 chr3L_1810001 RAL-382 1625 chr3L 1824908 1824928 chr3L 1825047 1825067 9 139 15.0 7.0 11.0 0.8 159 chr3L 1824908 intron Cpr62Ba - chr3L 1824988 intron Cpr62Ba - chr3L 1825067 exon Cpr62Ba - chr3L_9_1820001 chr3L_1820001 RAL-382 1626 chr3L 1841524 1841563 chr3L 1841659 1841698 19 135 8.0 7.5 7.8 2.2 174 chr3L 1841524 intron Cpr62Bc - chr3L 1841611 intron Cpr62Bc - chr3L 1841698 intron Cpr62Bc - chr3L_19_1840001 chr3L_1840001 RAL-382 1627 chr3L 1853024 1853052 chr3L 1853151 1853179 15 127 6.0 13.0 9.5 1.4 155 chr3L 1853024 intron CG13936 - chr3L 1853102 intron CG13936 - chr3L 1853179 intron CG13936 - chr3L_15_1850001 chr3L_1850001 RAL-382 1628 chr3L 1882320 1882349 chr3L 1882474 1882502 12 152 16.5 11.0 13.8 0.8 182 chr3L 1882320 intron CG13937 - chr3L 1882411 intron CG13937 - chr3L 1882502 intron CG13937 - chr3L_12_1880001 chr3L_1880001 RAL-382 1629 chr3L 1882350 1882382 chr3L 1882463 1882535 17 150 8.0 9.0 8.5 1.8 185 chr3L 1882350 intron CG13937 - chr3L 1882442 intron CG13937 - chr3L 1882535 intron CG13937 - chr3L_17_1880001 chr3L_1880001 RAL-382 1630 chr3L 1885235 1885317 chr3L 1885369 1885451 34 132 7.5 7.5 7.5 4.0 216 chr3L 1885235 intergenic Aprt -,Tmhs + chr3L 1885343 intergenic Tmhs +,Aprt - chr3L 1885451 intergenic Tmhs +,Aprt - chr3L_34_1885001 chr3L_1885001 RAL-382 1631 chr3L 1922404 1922437 chr3L 1922534 1922567 6 128 8.0 7.5 7.8 0.7 163 chr3L 1922404 intron Dbx + chr3L 1922486 intron Dbx + chr3L 1922567 intron Dbx + chr3L_6_1920001 chr3L_1920001 RAL-382 1632 chr3L 1924915 1924974 chr3L 1925103 1925162 12 184 3.5 5.5 4.5 2.2 247 chr3L 1924915 exon Dbx + chr3L 1925038 intron Dbx + chr3L 1925162 intron Dbx + chr3L_12_1925001 chr3L_1925001 RAL-382 1633 chr3L 2007374 2007420 chr3L 2007512 2007557 8 138 7.0 0.0 3.5 1.8 183 chr3L 2007374 intergenic not near genes chr3L 2007466 intergenic not near genes chr3L 2007557 intergenic not near genes chr3L_8_2005001 chr3L_2005001 RAL-382 1634 chr3L 2039326 2039399 chr3L 2039466 2039538 36 140 5.0 5.5 5.2 5.8 212 chr3L 2039326 intergenic sls - chr3L 2039432 intergenic sls - chr3L 2039538 intergenic sls - chr3L_36_2035001 chr3L_2035001 RAL-382 1635 chr3L 2107131 2107168 chr3L 2107266 2107298 19 134 10.0 8.5 9.2 1.9 167 chr3L 2107131 intron sls - chr3L 2107214 intron sls - chr3L 2107298 intron sls - chr3L_19_2105001 chr3L_2105001 RAL-382 1636 chr3L 2108207 2108271 chr3L 2113461 2113525 copia 30 5254 14.5 13.0 13.8 2.0 5318 chr3L 2108207 intron sls - chr3L 2110866 intron sls - chr3L 2113525 intron sls - chr3L_30_2110001 chr3L_2110001 RAL-382 1637 chr3L 2139160 2139234 chr3L 2139291 2139347 35 126 7.0 7.0 7.0 4.4 187 chr3L 2139160 intron zormin - chr3L 2139254 intron zormin - chr3L 2139347 intron zormin - chr3L_35_2135001 chr3L_2135001 RAL-382 1638 chr3L 2168728 2168796 chr3L 2168869 2168937 30 140 6.5 7.0 6.8 3.8 209 chr3L 2168728 exon CG15879 - chr3L 2168832 intron CG15879 - chr3L 2168937 intron CG15879 - chr3L_30_2165001 chr3L_2165001 RAL-382 1639 chr3L 2199782 2199818 chr3L 2199908 2199944 19 125 4.0 9.5 6.8 2.4 162 chr3L 2199782 intergenic not near genes chr3L 2199863 intergenic not near genes chr3L 2199944 intergenic not near genes chr3L_19_2195001 chr3L_2195001 RAL-382 1640 chr3L 2307954 2308021 chr3L 2308110 2308177 30 153 10.0 10.0 10.0 2.7 223 chr3L 2307954 intergenic not near genes chr3L 2308066 intergenic not near genes chr3L 2308177 intergenic not near genes chr3L_30_2305001 chr3L_2305001 RAL-382 1641 chr3L 2322713 2322738 chr3L 2322858 2322895 6 152 9.0 6.5 7.8 0.7 182 chr3L 2322713 5` UTR MsR1 + chr3L 2322804 intron MsR1 + chr3L 2322895 intron MsR1 + chr3L_6_2320001 chr3L_2320001 RAL-382 1642 chr3L 2331542 2331572 chr3L 2331668 2331699 11 126 16.5 10.0 13.2 0.8 157 chr3L 2331542 intron MsR1 + chr3L 2331620 intron MsR1 + chr3L 2331699 intron MsR1 + chr3L_11_2330001 chr3L_2330001 RAL-382 1643 chr3L 2331573 2331613 chr3L 2331661 2331718 15 120 12.0 9.0 10.5 1.3 145 chr3L 2331573 intron MsR1 + chr3L 2331646 intron MsR1 + chr3L 2331718 intron MsR1 + chr3L_15_2330001 chr3L_2330001 RAL-382 1644 chr3L 2411298 2411343 chr3L 2411428 2411456 15 127 4.5 8.5 6.5 2.0 158 chr3L 2411298 intron CG45186 + chr3L 2411377 intron CG45186 + chr3L 2411456 intron CG45186 + chr3L_15_2410001 chr3L_2410001 RAL-382 1645 chr3L 2420462 2420531 chr3L 2421162 2421231 19 696 5.5 7.5 6.5 2.5 769 chr3L 2420462 intron CG45186 + chr3L 2420846 intron CG45186 + chr3L 2421231 intron CG45186 + chr3L_19_2420001 chr3L_2420001 RAL-382 1646 chr3L 2447460 2447485 chr3L 2456666 2456681 roo 8 9205 18.5 9.5 14.0 0.5 9221 chr3L 2447460 intron CG45186 + chr3L 2452070 intron CG45186 + chr3L 2456681 intron CG45186 + chr3L_8_2450001 chr3L_2450001 RAL-382 1647 chr3L 2447487 2447537 chr3L 2456662 2456695 roo 24 9196 8.0 7.5 7.8 2.7 9208 chr3L 2447487 intron CG45186 + chr3L 2452091 intron CG45186 + chr3L 2456695 intron CG45186 + chr3L_24_2450001 chr3L_2450001 RAL-382 1648 chr3L 2467405 2467486 chr3L 2467552 2467642 7 150 4.5 0.0 2.2 2.2 237 chr3L 2467405 intron CG45186 + chr3L 2467524 intron CG45186 + chr3L 2467642 intron CG45186 + chr3L_7_2465001 chr3L_2465001 RAL-382 1649 chr3L 2483101 2483165 chr3L 2483230 2483288 8 117 6.5 5.5 6.0 1.1 187 chr3L 2483101 intron CG45186 + chr3L 2483194 intron CG45186 + chr3L 2483288 intron CG45186 + chr3L_8_2480001 chr3L_2480001 RAL-382 1650 chr3L 2515360 2515416 chr3L 2515494 2515548 15 132 6.0 7.5 6.8 1.9 188 chr3L 2515360 intron Spn - chr3L 2515454 intron Spn - chr3L 2515548 intron Spn - chr3L_15_2515001 chr3L_2515001 RAL-382 1651 chr3L 2533637 2533680 chr3L 2533734 2533804 14 118 6.5 9.5 8.0 1.6 167 chr3L 2533637 intron Spn - chr3L 2533720 intron Spn - chr3L 2533804 intron Spn - chr3L_14_2530001 chr3L_2530001 RAL-382 1652 chr3L 2534615 2534626 chr3L 2534748 2534759 8 133 0.0 9.5 4.8 1.4 144 chr3L 2534615 intron Spn - chr3L 2534687 intron Spn - chr3L 2534759 exon Spn - chr3L_8_2530001 chr3L_2530001 RAL-382 1653 chr3L 2546711 2546794 chr3L 2546850 2546933 13 136 3.0 1.0 2.0 4.3 222 chr3L 2546711 intron Spn - chr3L 2546822 intron Spn - chr3L 2546933 intron Spn - chr3L_13_2545001 chr3L_2545001 RAL-382 1654 chr3L 2555873 2555876 chr3L 2556002 2556005 4 129 24.0 3.0 13.5 0.3 132 chr3L 2555873 3` UTR msn - chr3L 2555939 3` UTR msn - chr3L 2556005 3` UTR msn - chr3L_4_2555001 chr3L_2555001 RAL-382 1655 chr3L 2555877 2555891 chr3L 2556000 2556020 7 127 21.0 3.0 12.0 0.5 143 chr3L 2555877 3` UTR msn - chr3L 2555948 3` UTR msn - chr3L 2556020 3` UTR msn - chr3L_7_2555001 chr3L_2555001 RAL-382 1656 chr3L 2581854 2581914 chr3L 2581992 2582058 11 143 2.5 9.5 6.0 1.6 204 chr3L 2581854 intron msn - chr3L 2581956 intron msn - chr3L 2582058 intron msn - chr3L_11_2580001 chr3L_2580001 RAL-382 1657 chr3L 2665698 2665766 chr3L 2665836 2665904 26 137 6.5 3.0 4.8 4.5 206 chr3L 2665698 intron Fife - chr3L 2665801 intron Fife - chr3L 2665904 intron Fife - chr3L_26_2665001 chr3L_2665001 RAL-382 1658 chr3L 2677069 2677076 chr3L 2677195 2677202 5 126 15.5 10.5 13.0 0.4 133 chr3L 2677069 intron Fife - chr3L 2677136 intron Fife - chr3L 2677202 intron Fife - chr3L_5_2675001 chr3L_2675001 RAL-382 1659 chr3L 2677082 2677106 chr3L 2677193 2677232 11 122 12.5 10.0 11.2 0.9 150 chr3L 2677082 intron Fife - chr3L 2677157 intron Fife - chr3L 2677232 intron Fife - chr3L_11_2675001 chr3L_2675001 RAL-382 1660 chr3L 2677111 2677140 chr3L 2677182 2677214 15 118 7.5 10.0 8.8 1.5 103 chr3L 2677111 intron Fife - chr3L 2677162 intron Fife - chr3L 2677214 intron Fife - chr3L_15_2675001 chr3L_2675001 RAL-382 1661 chr3L 2683908 2683961 chr3L 2684031 2684087 10 125 11.5 10.5 11.0 0.8 179 chr3L 2683908 intron Fife - chr3L 2683998 intron Fife - chr3L 2684087 intron Fife - chr3L_10_2680001 chr3L_2680001 RAL-382 1662 chr3L 2719496 2719559 chr3L 2719648 2719711 33 152 10.0 8.5 9.2 3.2 215 chr3L 2719496 3` UTR Mrtf - chr3L 2719604 3` UTR Mrtf - chr3L 2719711 3` UTR Mrtf - chr3L_33_2715001 chr3L_2715001 RAL-382 1663 chr3L 2751412 2751456 chr3L 2755757 2755796 F-element 26 4345 17.5 23.0 20.2 1.2 4384 chr3L 2751412 intron Mrtf - chr3L 2753604 intron Mrtf - chr3L 2755796 intron Mrtf - chr3L_26_2750001 chr3L_2750001 RAL-382 1664 chr3L 2795677 2795749 chr3L 2795850 2795906 23 168 4.0 5.0 4.5 4.2 229 chr3L 2795677 intron CG43444 - chr3L 2795792 intron CG43444 - chr3L 2795906 intron CG43444 - chr3L_23_2795001 chr3L_2795001 RAL-382 1665 chr3L 2835819 2835853 chr3L 2835957 2835983 8 134 6.5 6.5 6.5 1.1 164 chr3L 2835819 intron CG43444 - chr3L 2835901 intron CG43444 - chr3L 2835983 intron CG43444 - chr3L_8_2835001 chr3L_2835001 RAL-382 1666 chr3L 2856296 2856307 chr3L 2856428 2856439 5 132 2.0 5.5 3.8 1.0 143 chr3L 2856296 intron CG43444 - chr3L 2856368 intron CG43444 - chr3L 2856439 intron CG43444 - chr3L_5_2855001 chr3L_2855001 RAL-382 1667 chr3L 2873535 2873555 chr3L 2873665 2873684 8 130 17.0 0.0 8.5 0.8 149 chr3L 2873535 intron CG43444 - chr3L 2873610 intron CG43444 - chr3L 2873684 intron CG43444 - chr3L_8_2870001 chr3L_2870001 RAL-382 1668 chr3L 2897358 2897426 chr3L 2897514 2897580 30 155 8.5 6.5 7.5 3.5 222 chr3L 2897358 5` UTR Shab + chr3L 2897469 intron Shab + chr3L 2897580 intron Shab + chr3L_30_2895001 chr3L_2895001 RAL-382 1669 chr3L 2899530 2899603 chr3L 2899693 2899757 21 163 7.5 9.0 8.2 2.3 227 chr3L 2899530 intron Shab + chr3L 2899644 intron Shab + chr3L 2899757 intron Shab + chr3L_21_2895001 chr3L_2895001 RAL-382 1670 chr3L 2927795 2927870 chr3L 2936122 2936176 Tirant 32 8326 7.0 11.0 9.0 3.2 8381 chr3L 2927795 intron Shab + chr3L 2931986 intron Shab + chr3L 2936176 intron Shab + chr3L_32_2930001 chr3L_2930001 RAL-382 1671 chr3L 2965964 2966036 chr3L 2966096 2966166 25 131 7.0 11.0 9.0 2.5 202 chr3L 2965964 intergenic not near genes chr3L 2966065 intergenic not near genes chr3L 2966166 intergenic not near genes chr3L_25_2965001 chr3L_2965001 RAL-382 1672 chr3L 2966680 2966720 chr3L 2974157 2974200 mdg1 14 7478 12.5 3.0 7.8 1.6 7520 chr3L 2966680 intergenic not near genes chr3L 2970440 intergenic not near genes chr3L 2974200 intergenic not near genes chr3L_14_2970001 chr3L_2970001 RAL-382 1673 chr3L 2987682 2987750 chr3L 2987993 2988062 31 307 6.5 7.5 7.0 3.9 380 chr3L 2987682 intergenic not near genes chr3L 2987872 intergenic not near genes chr3L 2988062 intergenic not near genes chr3L_31_2985001 chr3L_2985001 RAL-382 1674 chr3L 3028314 3028372 chr3L 3028420 3028470 18 114 8.0 6.5 7.2 2.2 156 chr3L 3028314 intergenic not near genes chr3L 3028392 intergenic not near genes chr3L 3028470 intergenic not near genes chr3L_18_3025001 chr3L_3025001 RAL-382 1675 chr3L 3040276 3040355 chr3L 3042115 3042139 S-element 18 1836 7.0 1.5 4.2 3.5 1863 chr3L 3040276 3` UTR CG2162 + chr3L 3041208 intergenic not near genes chr3L 3042139 intergenic Jafrac2 + chr3L_18_3040001 chr3L_3040001 RAL-382 1676 chr3L 3051717 3051755 chr3L 3051989 3052026 pogo 7 280 8.0 11.5 9.8 0.6 309 chr3L 3051717 3` UTR CG32485 + chr3L 3051872 intergenic CG32485 + chr3L 3052026 intergenic CG32485 +,CG1271 + chr3L_7_3050001 chr3L_3050001 RAL-382 1677 chr3L 3075872 3075936 chr3L 3075998 3076047 11 121 10.5 14.0 12.2 0.8 175 chr3L 3075872 intron CG11486 + chr3L 3075960 intron CG11486 + chr3L 3076047 intron CG11486 + chr3L_11_3075001 chr3L_3075001 RAL-382 1678 chr3L 3178684 3178721 chr3L 3178817 3178854 12 133 18.0 7.5 12.8 0.9 170 chr3L 3178684 intergenic CG14964 -,Girdin + chr3L 3178769 intergenic Girdin +,CG14964 - chr3L 3178854 intergenic Girdin +,CG14964 - chr3L_12_3175001 chr3L_3175001 RAL-382 1679 chr3L 3178726 3178757 chr3L 3178811 3178883 11 122 9.5 5.0 7.2 1.3 157 chr3L 3178726 intergenic CG14964 -,Girdin + chr3L 3178804 intergenic Girdin +,CG14964 - chr3L 3178883 intergenic Girdin +,CG14964 - chr3L_11_3175001 chr3L_3175001 RAL-382 1680 chr3L 3247578 3247613 chr3L 3247709 3247745 14 132 7.0 15.0 11.0 1.2 167 chr3L 3247578 intergenic CG43389 + chr3L 3247662 intergenic CG43389 + chr3L 3247745 intergenic CG43389 + chr3L_14_3245001 chr3L_3245001 RAL-382 1681 chr3L 3259765 3259831 chr3L 3259915 3259981 14 150 4.0 12.5 8.2 1.5 216 chr3L 3259765 intron ckd + chr3L 3259873 intron ckd + chr3L 3259981 intron ckd + chr3L_14_3255001 chr3L_3255001 RAL-382 1682 chr3L 3281398 3281446 chr3L 3281943 3281990 Doc 11 538 7.5 6.5 7.0 1.4 592 chr3L 3281398 intron CG12017 + chr3L 3281694 intron CG12017 + chr3L 3281990 intron CG12017 + chr3L_11_3280001 chr3L_3280001 RAL-382 1683 chr3L 3284394 3284399 chr3L 3284528 3284533 4 134 21.5 8.5 15.0 0.2 139 chr3L 3284394 intron CG12017 + chr3L 3284464 intron CG12017 + chr3L 3284533 intron CG12017 + chr3L_4_3280001 chr3L_3280001 RAL-382 1684 chr3L 3284400 3284465 chr3L 3284527 3284528 23 127 7.0 8.0 7.5 2.7 128 chr3L 3284400 intron CG12017 + chr3L 3284464 intron CG12017 + chr3L 3284528 intron CG12017 + chr3L_23_3280001 chr3L_3280001 RAL-382 1685 chr3L 3326344 3326406 chr3L 3326475 3326542 27 135 10.0 9.5 9.8 2.5 198 chr3L 3326344 intron,5` UTR CG11526 -,PHGPx + chr3L 3326443 intron,5` UTR CG11526 -,PHGPx + chr3L 3326542 intron,5` UTR CG11526 -,PHGPx + chr3L_27_3325001 chr3L_3325001 RAL-382 1686 chr3L 3436239 3436315 chr3L 3436368 3436444 45 127 9.5 11.0 10.2 4.0 205 chr3L 3436239 intron eIF5B - chr3L 3436342 intron eIF5B - chr3L 3436444 intron eIF5B - chr3L_45_3435001 chr3L_3435001 RAL-382 1687 chr3L 3449215 3449235 chr3L 3449343 3449363 9 127 6.0 3.5 4.8 1.6 148 chr3L 3449215 intron eIF5B - chr3L 3449289 intron eIF5B - chr3L 3449363 intron eIF5B - chr3L_9_3445001 chr3L_3445001 RAL-382 1688 chr3L 3470123 3470134 chr3L 3470249 3470260 6 126 13.5 12.5 13.0 0.4 137 chr3L 3470123 intron CG14971 - chr3L 3470192 intron CG14971 - chr3L 3470260 intron CG14971 - chr3L_6_3470001 chr3L_3470001 RAL-382 1689 chr3L 3470138 3470181 chr3L 3470244 3470307 11 124 3.5 12.5 8.0 1.2 169 chr3L 3470138 intron CG14971 - chr3L 3470222 intron CG14971 - chr3L 3470307 intron CG14971 - chr3L_11_3470001 chr3L_3470001 RAL-382 1690 chr3L 3475037 3475059 chr3L 3475531 3475553 jockey 7 494 14.5 6.5 10.5 0.6 516 chr3L 3475037 intron CG42324 + chr3L 3475295 intron CG42324 + chr3L 3475553 intron CG42324 + chr3L_7_3475001 chr3L_3475001 RAL-382 1691 chr3L 3475066 3475074 chr3L 3475520 3475562 jockey 4 475 12.0 6.0 9.0 0.4 496 chr3L 3475066 intron CG42324 + chr3L 3475314 intron CG42324 + chr3L 3475562 intron CG42324 + chr3L_4_3475001 chr3L_3475001 RAL-382 1692 chr3L 3494147 3494203 chr3L 3494274 3494330 31 127 0.0 7.0 3.5 6.9 183 chr3L 3494147 intron CG42324 + chr3L 3494238 intron CG42324 + chr3L 3494330 intron CG42324 + chr3L_31_3490001 chr3L_3490001 RAL-382 1693 chr3L 3537927 3537985 chr3L 3538229 3538286 17 301 5.0 10.0 7.5 2.0 359 chr3L 3537927 intron Eip63E + chr3L 3538106 intron Eip63E + chr3L 3538286 intron Eip63E + chr3L_17_3535001 chr3L_3535001 RAL-382 1694 chr3L 3539907 3539984 chr3L 3540046 3540123 12 136 3.5 1.0 2.2 3.8 216 chr3L 3539907 intron Eip63E + chr3L 3540015 intron Eip63E + chr3L 3540123 intron Eip63E + chr3L_12_3540001 chr3L_3540001 RAL-382 1695 chr3L 3565891 3565900 chr3L 3566017 3566026 5 126 13.0 8.0 10.5 0.4 135 chr3L 3565891 intron Eip63E + chr3L 3565958 intron Eip63E + chr3L 3566026 intron Eip63E + chr3L_5_3565001 chr3L_3565001 RAL-382 1696 chr3L 3565906 3565965 chr3L 3566016 3566061 19 120 6.0 7.5 6.8 2.4 155 chr3L 3565906 intron Eip63E + chr3L 3565984 intron Eip63E + chr3L 3566061 intron Eip63E + chr3L_19_3565001 chr3L_3565001 RAL-382 1697 chr3L 3601269 3601330 chr3L 3606630 3606684 copia 17 5357 5.0 8.0 6.5 2.3 5415 chr3L 3601269 intron Eip63E + chr3L 3603976 intron Eip63E + chr3L 3606684 intron Eip63E + chr3L_17_3600001 chr3L_3600001 RAL-382 1698 chr3L 3627185 3627254 chr3L 3627340 3627409 34 155 8.0 7.0 7.5 4.0 224 chr3L 3627185 intron dar1 + chr3L 3627297 intron dar1 + chr3L 3627409 intron dar1 + chr3L_34_3625001 chr3L_3625001 RAL-382 1699 chr3L 3726592 3726639 chr3L 3726723 3726772 23 131 0.0 3.0 1.5 9.2 180 chr3L 3726592 intron CG32264 - chr3L 3726682 intron CG32264 - chr3L 3726772 intron CG32264 - chr3L_23_3725001 chr3L_3725001 RAL-382 1700 chr3L 3763708 3763740 chr3L 3763838 3763856 12 127 11.5 0.0 5.8 1.8 148 chr3L 3763708 intron CG32264 - chr3L 3763782 intron CG32264 - chr3L 3763856 intron CG32264 - chr3L_12_3760001 chr3L_3760001 RAL-382 1701 chr3L 3766687 3766759 chr3L 3766823 3766895 18 134 6.0 5.0 5.5 2.8 208 chr3L 3766687 intron CG32264 - chr3L 3766791 intron CG32264 - chr3L 3766895 intron CG32264 - chr3L_18_3765001 chr3L_3765001 RAL-382 1702 chr3L 3768913 3768941 chr3L 3769064 3769092 11 150 16.5 11.0 13.8 0.7 179 chr3L 3768913 intron CG32264 - chr3L 3769002 intron CG32264 - chr3L 3769092 exon CG32264 - chr3L_11_3765001 chr3L_3765001 RAL-382 1703 chr3L 3768953 3768980 chr3L 3769062 3769130 9 146 10.0 10.0 10.0 0.8 177 chr3L 3768953 intron CG32264 - chr3L 3769042 intron CG32264 - chr3L 3769130 exon CG32264 - chr3L_9_3765001 chr3L_3765001 RAL-382 1704 chr3L 3783223 3783286 chr3L 3783350 3783413 17 125 8.0 7.0 7.5 2.0 190 chr3L 3783223 intron CG32264 - chr3L 3783318 intron CG32264 - chr3L 3783413 intron CG32264 - chr3L_17_3780001 chr3L_3780001 RAL-382 1705 chr3L 3797345 3797394 chr3L 3797534 3797583 17 186 4.0 6.0 5.0 2.8 238 chr3L 3797345 intron CG32264 - chr3L 3797464 intron CG32264 - chr3L 3797583 intron CG32264 - chr3L_17_3795001 chr3L_3795001 RAL-382 1706 chr3L 3797995 3798064 chr3L 3798125 3798194 26 128 9.0 6.5 7.8 3.0 199 chr3L 3797995 intron CG32264 - chr3L 3798094 intron CG32264 - chr3L 3798194 intron CG32264 - chr3L_26_3795001 chr3L_3795001 RAL-382 1707 chr3L 3815005 3815080 chr3L 3815136 3815211 21 128 4.0 7.5 5.8 3.1 206 chr3L 3815005 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815108 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815211 intron,3` UTR Scsalpha +,CR43932 - chr3L_21_3815001 chr3L_3815001 RAL-382 1708 chr3L 3833690 3833770 chr3L 3833981 3834061 pogo 24 291 5.5 6.0 5.8 3.5 371 chr3L 3833690 intron enc + chr3L 3833876 intron enc + chr3L 3834061 intron enc + chr3L_24_3830001 chr3L_3830001 RAL-382 1709 chr3L 3872287 3872294 chr3L 3872430 3872437 5 143 6.0 24.0 15.0 0.3 150 chr3L 3872287 intergenic not near genes chr3L 3872362 intergenic not near genes chr3L 3872437 intergenic not near genes chr3L_5_3870001 chr3L_3870001 RAL-382 1710 chr3L 3889105 3889131 chr3L 3889238 3889264 11 133 1.0 10.5 5.8 1.6 159 chr3L 3889105 intergenic not near genes chr3L 3889184 intergenic not near genes chr3L 3889264 intergenic not near genes chr3L_11_3885001 chr3L_3885001 RAL-382 1711 chr3L 3921341 3921419 chr3L 3921655 3921684 17 310 4.0 6.0 5.0 2.8 343 chr3L 3921341 intron Eip63F-1 - chr3L 3921512 intron Eip63F-1 - chr3L 3921684 intron Eip63F-1 - chr3L_17_3920001 chr3L_3920001 RAL-382 1712 chr3L 3928475 3928540 chr3L 3928717 3928771 15 238 1.0 0.0 0.5 10.0 296 chr3L 3928475 intron Eip63F-1 - chr3L 3928623 intron Eip63F-1 - chr3L 3928771 intron Eip63F-1 - chr3L_15_3925001 chr3L_3925001 RAL-382 1713 chr3L 3936416 3936491 chr3L 3936559 3936634 33 136 9.5 7.5 8.5 3.5 218 chr3L 3936416 3` UTR CG10866 - chr3L 3936525 3` UTR CG10866 - chr3L 3936634 3` UTR CG10866 - chr3L_33_3935001 chr3L_3935001 RAL-382 1714 chr3L 3956537 3956568 chr3L 3956665 3956696 17 128 16.5 18.5 17.5 0.9 159 chr3L 3956537 3` UTR CG12605 - chr3L 3956616 3` UTR CG12605 - chr3L 3956696 3` UTR CG12605 - chr3L_17_3955001 chr3L_3955001 RAL-382 1715 chr3L 3967995 3967998 chr3L 3968124 3968127 4 129 20.5 0.0 10.2 0.4 132 chr3L 3967995 intergenic not near genes chr3L 3968061 intergenic not near genes chr3L 3968127 intergenic not near genes chr3L_4_3965001 chr3L_3965001 RAL-382 1716 chr3L 3968000 3968003 chr3L 3968123 3968132 5 128 19.0 0.0 9.5 0.5 132 chr3L 3968000 intergenic not near genes chr3L 3968066 intergenic not near genes chr3L 3968132 intergenic not near genes chr3L_5_3965001 chr3L_3965001 RAL-382 1717 chr3L 3968004 3968043 chr3L 3968122 3968172 17 128 11.0 0.0 5.5 2.6 168 chr3L 3968004 intergenic not near genes chr3L 3968088 intergenic not near genes chr3L 3968172 intergenic not near genes chr3L_17_3965001 chr3L_3965001 RAL-382 1718 chr3L 4146802 4146835 chr3L 4146934 4146967 13 132 0.0 14.5 7.2 1.6 165 chr3L 4146802 intergenic not near genes chr3L 4146884 intergenic not near genes chr3L 4146967 intergenic not near genes chr3L_13_4145001 chr3L_4145001 RAL-382 1719 chr3L 4170108 4170163 chr3L 4170235 4170291 24 126 10.5 4.5 7.5 2.8 183 chr3L 4170108 intergenic Ero1L + chr3L 4170200 intergenic Ero1L + chr3L 4170291 intergenic Ero1L + chr3L_24_4170001 chr3L_4170001 RAL-382 1720 chr3L 4214490 4214547 chr3L 4214682 4214739 30 190 9.0 13.0 11.0 2.5 249 chr3L 4214490 intron CG43367 + chr3L 4214614 intron CG43367 + chr3L 4214739 intron CG43367 + chr3L_30_4210001 chr3L_4210001 RAL-382 1721 chr3L 4233051 4233122 chr3L 4233182 4233260 19 136 3.0 4.0 3.5 4.2 209 chr3L 4233051 intron ImpL2 - chr3L 4233156 intron ImpL2 - chr3L 4233260 intron ImpL2 - chr3L_19_4230001 chr3L_4230001 RAL-382 1722 chr3L 4238718 4238777 chr3L 4238855 4238914 17 136 0.0 0.0 0.0 17.0 196 chr3L 4238718 intergenic not near genes chr3L 4238816 intergenic not near genes chr3L 4238914 intergenic not near genes chr3L_17_4235001 chr3L_4235001 RAL-382 1723 chr3L 4328693 4328756 chr3L 4336241 4336304 412 26 7547 8.0 10.5 9.2 2.5 7611 chr3L 4328693 intron Cip4 - chr3L 4332498 intron Cip4 - chr3L 4336304 exon Cip4 - chr3L_26_4330001 chr3L_4330001 RAL-382 1724 chr3L 4341331 4341332 chr3L 21448026 21448027 6 17106695 43.5 37.5 40.5 0.1 17106696 chr3L 4341331 intron Cip4 - chr3L 12894679 3` UTR CG14118 + chr3L 21448027 3` UTR Syx7 + chr3L_6_12890001 chr3L_12890001 RAL-382 1725 chr3L 4361015 4361025 chr3L 4362921 4362931 7 1906 0.0 11.0 5.5 1.1 1916 chr3L 4361015 intron Cip4 - chr3L 4361973 intron Cip4 - chr3L 4362931 intron Cip4 - chr3L_7_4360001 chr3L_4360001 RAL-382 1726 chr3L 4364202 4364212 chr3L 4364341 4364351 7 139 0.0 23.5 11.8 0.5 149 chr3L 4364202 intergenic Cip4 -,mRpS6 + chr3L 4364276 intergenic Cip4 -,mRpS6 + chr3L 4364351 intergenic mRpS6 +,Cip4 - chr3L_7_4360001 chr3L_4360001 RAL-382 1727 chr3L 4364214 4364228 chr3L 4364335 4364362 6 135 0.0 23.5 11.8 0.5 148 chr3L 4364214 intergenic Cip4 -,mRpS6 + chr3L 4364288 intergenic Cip4 -,mRpS6 + chr3L 4364362 intergenic mRpS6 +,Cip4 - chr3L_6_4360001 chr3L_4360001 RAL-382 1728 chr3L 4389975 4390032 chr3L 4390112 4390169 15 137 8.5 4.5 6.5 2.0 194 chr3L 4389975 intron slow + chr3L 4390072 intron slow + chr3L 4390169 intron slow + chr3L_15_4390001 chr3L_4390001 RAL-382 1729 chr3L 4398699 4398744 chr3L 4398846 4398891 25 146 16.0 10.0 13.0 1.8 192 chr3L 4398699 intron slow + chr3L 4398795 intron slow + chr3L 4398891 intron slow + chr3L_25_4395001 chr3L_4395001 RAL-382 1730 chr3L 4554110 4554228 chr3L 4554221 4554377 6 143 0.0 0.0 0.0 6.0 267 chr3L 4554110 intergenic CG33777 - chr3L 4554244 intergenic CG33777 - chr3L 4554377 intergenic CG33777 - chr3L_6_4550001 chr3L_4550001 RAL-382 1731 chr3L 4675989 4676020 chr3L 4676120 4676151 13 131 13.5 9.0 11.2 1.1 162 chr3L 4675989 intron axo - chr3L 4676070 intron axo - chr3L 4676151 intron axo - chr3L_13_4675001 chr3L_4675001 RAL-382 1732 chr3L 4700748 4700796 chr3L 4700892 4700940 12 144 8.5 0.5 4.5 2.2 192 chr3L 4700748 intron RhoGEF64C + chr3L 4700844 intron RhoGEF64C + chr3L 4700940 intron RhoGEF64C + chr3L_12_4700001 chr3L_4700001 RAL-382 1733 chr3L 4726393 4726456 chr3L 4726524 4726587 23 129 10.5 10.0 10.2 2.1 194 chr3L 4726393 intron RhoGEF64C + chr3L 4726490 intron RhoGEF64C + chr3L 4726587 intron RhoGEF64C + chr3L_23_4725001 chr3L_4725001 RAL-382 1734 chr3L 4748663 4748685 chr3L 4748804 4748826 5 141 10.0 5.0 7.5 0.6 163 chr3L 4748663 intron RhoGEF64C + chr3L 4748744 intron RhoGEF64C + chr3L 4748826 intron RhoGEF64C + chr3L_5_4745001 chr3L_4745001 RAL-382 1735 chr3L 4748689 4748726 chr3L 4748800 4748867 11 127 6.0 4.0 5.0 1.8 178 chr3L 4748689 intron RhoGEF64C + chr3L 4748778 intron RhoGEF64C + chr3L 4748867 intron RhoGEF64C + chr3L_11_4745001 chr3L_4745001 RAL-382 1736 chr3L 4775799 4775873 chr3L 4775936 4776011 34 137 10.0 7.5 8.8 3.5 212 chr3L 4775799 intron RhoGEF64C + chr3L 4775905 intron RhoGEF64C + chr3L 4776011 intron RhoGEF64C + chr3L_34_4775001 chr3L_4775001 RAL-382 1737 chr3L 4795451 4795519 chr3L 4795578 4795611 4 104 0.0 0.0 0.0 4.0 160 chr3L 4795451 intron RhoGEF64C + chr3L 4795531 intron RhoGEF64C + chr3L 4795611 intron RhoGEF64C + chr3L_4_4795001 chr3L_4795001 RAL-382 1738 chr3L 4837846 4837911 chr3L 4837972 4838040 31 129 12.0 10.5 11.2 2.5 194 chr3L 4837846 3` UTR CG13707 - chr3L 4837943 3` UTR CG13707 - chr3L 4838040 3` UTR CG13707 - chr3L_31_4835001 chr3L_4835001 RAL-382 1739 chr3L 4840341 4840419 chr3L 4840500 4840538 10 155 2.5 7.5 5.0 1.7 197 chr3L 4840341 intergenic CG13707 - chr3L 4840440 intergenic CG13707 - chr3L 4840538 intergenic CG13707 - chr3L_10_4840001 chr3L_4840001 RAL-382 1740 chr3L 4858265 4858331 chr3L 4858405 4858434 26 134 10.5 12.5 11.5 2.1 169 chr3L 4858265 intergenic not near genes chr3L 4858350 intergenic not near genes chr3L 4858434 intergenic not near genes chr3L_26_4855001 chr3L_4855001 RAL-382 1741 chr3L 4901084 4901151 chr3L 4907324 4907391 diver 13 6239 9.0 4.5 6.8 1.7 6307 chr3L 4901084 intergenic CG13704 + chr3L 4904238 intergenic not near genes chr3L 4907391 intergenic not near genes chr3L_13_4900001 chr3L_4900001 RAL-382 1742 chr3L 4907926 4907933 chr3L 4908052 4908059 5 126 16.5 5.0 10.8 0.4 133 chr3L 4907926 intergenic not near genes chr3L 4907992 intergenic not near genes chr3L 4908059 intergenic not near genes chr3L_5_4905001 chr3L_4905001 RAL-382 1743 chr3L 5030722 5030797 chr3L 5030848 5030923 6 123 7.5 6.5 7.0 0.8 201 chr3L 5030722 intron Con - chr3L 5030822 intron Con - chr3L 5030923 intron Con - chr3L_6_5030001 chr3L_5030001 RAL-382 1744 chr3L 5034125 5034154 chr3L 5043327 5043356 roo 16 9202 10.0 11.0 10.5 1.4 9231 chr3L 5034125 intron Con - chr3L 5038740 intron Con - chr3L 5043356 intron Con - chr3L_16_5035001 chr3L_5035001 RAL-382 1745 chr3L 5034155 5034190 chr3L 5043317 5043392 roo 16 9197 8.0 8.5 8.2 1.7 9237 chr3L 5034155 intron Con - chr3L 5038774 intron Con - chr3L 5043392 intron Con - chr3L_16_5035001 chr3L_5035001 RAL-382 1746 chr3L 5045413 5045474 chr3L 5050244 5050305 Doc 31 4830 14.0 12.0 13.0 2.2 4892 chr3L 5045413 5` UTR Con - chr3L 5047859 intron Con - chr3L 5050305 intron Con - chr3L_31_5045001 chr3L_5045001 RAL-382 1747 chr3L 5066234 5066252 chr3L 5066394 5066412 9 160 5.5 17.5 11.5 0.7 178 chr3L 5066234 intron Con - chr3L 5066323 intron Con - chr3L 5066412 intron Con - chr3L_9_5065001 chr3L_5065001 RAL-382 1748 chr3L 5083523 5083536 chr3L 5083694 5083707 4 171 13.5 8.5 11.0 0.3 184 chr3L 5083523 intergenic not near genes chr3L 5083615 intergenic not near genes chr3L 5083707 intergenic not near genes chr3L_4_5080001 chr3L_5080001 RAL-382 1749 chr3L 5083542 5083566 chr3L 5083693 5083737 7 168 6.5 8.5 7.5 0.8 195 chr3L 5083542 intergenic not near genes chr3L 5083640 intergenic not near genes chr3L 5083737 intergenic not near genes chr3L_7_5080001 chr3L_5080001 RAL-382 1750 chr3L 5103564 5103581 chr3L 5103694 5103711 10 130 21.0 0.0 10.5 0.9 147 chr3L 5103564 intergenic not near genes chr3L 5103638 intergenic not near genes chr3L 5103711 intergenic not near genes chr3L_10_5100001 chr3L_5100001 RAL-382 1751 chr3L 5104433 5104505 chr3L 5124617 5124689 30 20182 9.0 7.5 8.2 3.3 20256 chr3L 5104433 intergenic not near genes chr3L 5114561 intergenic not near genes chr3L 5124689 intergenic not near genes chr3L_30_5110001 chr3L_5110001 RAL-382 1752 chr3L 5154841 5154922 chr3L 5155017 5155097 35 170 0.5 3.5 2.0 11.7 256 chr3L 5154841 intergenic Srp54k + chr3L 5154969 intergenic Srp54k + chr3L 5155097 intergenic Srp54k + chr3L_35_5150001 chr3L_5150001 RAL-382 1753 chr3L 5212191 5212269 chr3L 5212324 5212382 32 126 3.5 5.0 4.2 6.2 191 chr3L 5212191 intron shep - chr3L 5212286 intron shep - chr3L 5212382 intron shep - chr3L_32_5210001 chr3L_5210001 RAL-382 1754 chr3L 5223382 5223431 chr3L 5223509 5223563 10 124 6.5 4.5 5.5 1.5 181 chr3L 5223382 intron shep - chr3L 5223472 intron shep - chr3L 5223563 intron shep - chr3L_10_5220001 chr3L_5220001 RAL-382 1755 chr3L 5223440 5223447 chr3L 5223506 5223520 4 90 3.0 4.5 3.8 0.8 80 chr3L 5223440 intron shep - chr3L 5223480 intron shep - chr3L 5223520 intron shep - chr3L_4_5220001 chr3L_5220001 RAL-382 1756 chr3L 5225015 5225101 chr3L 5225177 5225252 7 162 0.0 0.0 0.0 7.0 237 chr3L 5225015 intron shep - chr3L 5225134 intron shep - chr3L 5225252 intron shep - chr3L_7_5225001 chr3L_5225001 RAL-382 1757 chr3L 5248949 5249007 chr3L 5249083 5249141 17 132 3.0 9.0 6.0 2.4 192 chr3L 5248949 intron shep - chr3L 5249045 intron shep - chr3L 5249141 intron shep - chr3L_17_5245001 chr3L_5245001 RAL-382 1758 chr3L 5251850 5251936 chr3L 5252012 5252072 5 157 0.0 3.0 1.5 2.0 222 chr3L 5251850 intron shep - chr3L 5251961 intron shep - chr3L 5252072 intron shep - chr3L_5_5250001 chr3L_5250001 RAL-382 1759 chr3L 5327414 5327475 chr3L 5327549 5327610 17 135 6.0 4.5 5.2 2.7 196 chr3L 5327414 intergenic not near genes chr3L 5327512 intergenic not near genes chr3L 5327610 intergenic not near genes chr3L_17_5325001 chr3L_5325001 RAL-382 1760 chr3L 5339781 5339852 chr3L 5340075 5340146 31 293 7.0 10.0 8.5 3.3 365 chr3L 5339781 intergenic not near genes chr3L 5339964 intergenic not near genes chr3L 5340146 intergenic not near genes chr3L_31_5335001 chr3L_5335001 RAL-382 1761 chr3L 5343180 5343195 chr3L 5343318 5343333 5 136 0.0 0.0 0.0 5.0 153 chr3L 5343180 intergenic lama - chr3L 5343256 intergenic lama - chr3L 5343333 intergenic lama - chr3L_5_5340001 chr3L_5340001 RAL-382 1762 chr3L 5350762 5350798 chr3L 5350925 5350961 11 163 4.0 9.0 6.5 1.5 199 chr3L 5350762 intron lama - chr3L 5350862 intron lama - chr3L 5350961 intron lama - chr3L_11_5350001 chr3L_5350001 RAL-382 1763 chr3L 5360972 5361016 chr3L 5361107 5361147 13 133 10.0 6.5 8.2 1.4 175 chr3L 5360972 exon CG4769 + chr3L 5361060 intron CG4769 + chr3L 5361147 intron CG4769 + chr3L_13_5360001 chr3L_5360001 RAL-382 1764 chr3L 5384510 5384572 chr3L 5384637 5384699 26 124 8.5 13.0 10.8 2.2 189 chr3L 5384510 intergenic not near genes chr3L 5384604 intergenic not near genes chr3L 5384699 intergenic not near genes chr3L_26_5380001 chr3L_5380001 RAL-382 1765 chr3L 5388156 5388213 chr3L 5388530 5388587 34 370 16.5 14.5 15.5 2.1 431 chr3L 5388156 intergenic not near genes chr3L 5388372 intergenic not near genes chr3L 5388587 intergenic not near genes chr3L_34_5385001 chr3L_5385001 RAL-382 1766 chr3L 5388214 5388229 chr3L 5388525 5388603 19 362 14.0 12.0 13.0 1.4 389 chr3L 5388214 intergenic not near genes chr3L 5388408 intergenic not near genes chr3L 5388603 intergenic not near genes chr3L_19_5385001 chr3L_5385001 RAL-382 1767 chr3L 5386364 5386375 chr3L 5390401 5390412 4 4038 49.0 19.5 34.2 0.1 4048 chr3L 5386364 intergenic not near genes chr3L 5388388 intergenic not near genes chr3L 5390412 intergenic not near genes chr3L_4_5385001 chr3L_5385001 RAL-382 1768 chr3L 5386332 5386379 chr3L 5390415 5390437 4 4057 48.5 23.0 35.8 0.1 4105 chr3L 5386332 intergenic not near genes chr3L 5388384 intergenic not near genes chr3L 5390437 intergenic not near genes chr3L_4_5385001 chr3L_5385001 RAL-382 1769 chr3L 5396418 5396472 chr3L 5396554 5396609 15 136 0.0 0.0 0.0 15.0 191 chr3L 5396418 intergenic not near genes chr3L 5396514 intergenic not near genes chr3L 5396609 intergenic not near genes chr3L_15_5395001 chr3L_5395001 RAL-382 1770 chr3L 5399536 5399544 chr3L 5399672 5399674 6 136 9.0 0.0 4.5 1.1 138 chr3L 5399536 intergenic not near genes chr3L 5399605 intergenic not near genes chr3L 5399674 intergenic not near genes chr3L_6_5395001 chr3L_5395001 RAL-382 1771 chr3L 5389115 5389128 chr3L 5447217 5447222 4 58098 54.0 19.0 36.5 0.1 58107 chr3L 5389115 intergenic not near genes chr3L 5418168 intergenic not near genes chr3L 5447222 intergenic not near genes chr3L_4_5415001 chr3L_5415001 RAL-382 1772 chr3L 5449483 5449562 chr3L 5449612 5449691 29 129 10.0 9.5 9.8 2.7 208 chr3L 5449483 intergenic not near genes chr3L 5449587 intergenic not near genes chr3L 5449691 intergenic not near genes chr3L_29_5445001 chr3L_5445001 RAL-382 1773 chr3L 5458092 5458093 chr3L 5466722 5466745 Max-element 5 8643 0.5 13.0 6.8 0.6 8653 chr3L 5458092 intergenic not near genes chr3L 5462418 intergenic not near genes chr3L 5466745 intergenic not near genes chr3L_5_5460001 chr3L_5460001 RAL-382 1774 chr3L 5490342 5490373 chr3L 5490538 5490569 11 196 19.0 7.0 13.0 0.8 227 chr3L 5490342 intergenic not near genes chr3L 5490456 intergenic not near genes chr3L 5490569 intergenic not near genes chr3L_11_5490001 chr3L_5490001 RAL-382 1775 chr3L 5504076 5504119 chr3L 5504208 5504251 19 131 5.0 4.5 4.8 3.3 175 chr3L 5504076 exon CG34342 - chr3L 5504164 intron CG34342 - chr3L 5504251 intron CG34342 - chr3L_19_5500001 chr3L_5500001 RAL-382 1776 chr3L 5514693 5514767 chr3L 5514820 5514878 25 126 8.5 6.0 7.2 3.0 185 chr3L 5514693 intron Lkr - chr3L 5514786 intron Lkr - chr3L 5514878 intron Lkr - chr3L_25_5510001 chr3L_5510001 RAL-382 1777 chr3L 5537678 5537754 chr3L 5538070 5538120 jockey 26 388 9.5 6.0 7.8 3.0 442 chr3L 5537678 intergenic not near genes chr3L 5537899 intergenic not near genes chr3L 5538120 intergenic CG10625 - chr3L_26_5535001 chr3L_5535001 RAL-382 1778 chr3L 5561618 5561693 chr3L 5561750 5561825 30 132 7.0 5.5 6.2 4.2 207 chr3L 5561618 intergenic sinu -,Sucb - chr3L 5561722 3` UTR Sucb - chr3L 5561825 3` UTR Sucb - chr3L_30_5560001 chr3L_5560001 RAL-382 1779 chr3L 5572120 5572150 chr3L 5572250 5572288 12 128 7.0 11.5 9.2 1.2 168 chr3L 5572120 intron Msr-110 - chr3L 5572204 intron Msr-110 - chr3L 5572288 intron Msr-110 - chr3L_12_5570001 chr3L_5570001 RAL-382 1780 chr3L 5576935 5576989 chr3L 5577067 5577121 14 132 5.5 11.0 8.2 1.5 186 chr3L 5576935 5` UTR Msr-110 - chr3L 5577028 intron Msr-110 - chr3L 5577121 intron Msr-110 - chr3L_14_5575001 chr3L_5575001 RAL-382 1781 chr3L 5621479 5621544 chr3L 5621617 5621682 29 135 10.0 9.5 9.8 2.7 203 chr3L 5621479 intergenic not near genes chr3L 5621580 intergenic not near genes chr3L 5621682 intergenic not near genes chr3L_29_5620001 chr3L_5620001 RAL-382 1782 chr3L 5683220 5683267 chr3L 5683349 5683404 15 137 12.5 7.0 9.8 1.4 184 chr3L 5683220 intron sif + chr3L 5683312 intron sif + chr3L 5683404 intron sif + chr3L_15_5680001 chr3L_5680001 RAL-382 1783 chr3L 5683269 5683290 chr3L 5683344 5683370 7 112 7.5 7.0 7.2 0.9 101 chr3L 5683269 intron sif + chr3L 5683320 intron sif + chr3L 5683370 intron sif + chr3L_7_5680001 chr3L_5680001 RAL-382 1784 chr3L 5908049 5908107 chr3L 5908179 5908237 28 130 0.5 13.0 6.8 3.6 188 chr3L 5908049 intron CG13288 + chr3L 5908143 intron CG13288 + chr3L 5908237 intron CG13288 + chr3L_28_5905001 chr3L_5905001 RAL-382 1785 chr3L 5909989 5909995 chr3L 5910280 5910286 pogo 4 291 28.0 10.5 19.2 0.2 297 chr3L 5909989 intron CG13288 + chr3L 5910138 intron CG13288 + chr3L 5910286 intron CG13288 + chr3L_4_5910001 chr3L_5910001 RAL-382 1786 chr3L 5909997 5910055 chr3L 5910272 5910346 pogo 29 288 11.0 9.0 10.0 2.6 349 chr3L 5909997 intron CG13288 + chr3L 5910172 intron CG13288 + chr3L 5910346 intron CG13288 + chr3L_29_5910001 chr3L_5910001 RAL-382 1787 chr3L 5916787 5916812 chr3L 5916924 5916944 15 136 27.0 10.5 18.8 0.8 157 chr3L 5916787 intron CG13288 + chr3L 5916866 intron CG13288 + chr3L 5916944 3` UTR CG13288 + chr3L_15_5915001 chr3L_5915001 RAL-382 1788 chr3L 5916815 5916860 chr3L 5916952 5916997 26 137 11.0 18.0 14.5 1.7 182 chr3L 5916815 intron CG13288 + chr3L 5916906 intron CG13288 + chr3L 5916997 3` UTR CG13288 + chr3L_26_5915001 chr3L_5915001 RAL-382 1789 chr3L 5926271 5926309 chr3L 5926511 5926549 10 238 14.0 4.0 9.0 1.0 278 chr3L 5926271 intron Vap-33B + chr3L 5926410 intron Vap-33B + chr3L 5926549 intron Vap-33B + chr3L_10_5925001 chr3L_5925001 RAL-382 1790 chr3L 5926311 5926316 chr3L 5926510 5926551 BS 6 219 13.5 4.0 8.8 0.6 240 chr3L 5926311 intron Vap-33B + chr3L 5926431 intron Vap-33B + chr3L 5926551 intron Vap-33B + chr3L_6_5925001 chr3L_5925001 RAL-382 1791 chr3L 5926319 5926345 chr3L 5926509 5926587 BS 10 224 6.0 3.5 4.8 1.7 268 chr3L 5926319 intron Vap-33B + chr3L 5926453 intron Vap-33B + chr3L 5926587 intron Vap-33B + chr3L_10_5925001 chr3L_5925001 RAL-382 1792 chr3L 6001644 6001713 chr3L 6004394 6004463 jockey 26 2750 7.0 7.0 7.0 3.2 2819 chr3L 6001644 intron PVRAP + chr3L 6003054 intron PVRAP + chr3L 6004463 intron PVRAP + chr3L_26_6000001 chr3L_6000001 RAL-382 1793 chr3L 6023484 6023549 chr3L 6023664 6023729 22 175 6.5 11.0 8.8 2.2 245 chr3L 6023484 intron PVRAP + chr3L 6023606 intron PVRAP + chr3L 6023729 intron PVRAP + chr3L_22_6020001 chr3L_6020001 RAL-382 1794 chr3L 6033119 6033157 chr3L 6033328 6033366 14 209 6.0 5.0 5.5 2.2 247 chr3L 6033119 intergenic CG10477 - chr3L 6033242 3` UTR CG10477 - chr3L 6033366 3` UTR CG10477 - chr3L_14_6030001 chr3L_6030001 RAL-382 1795 chr3L 6040229 6040263 chr3L 6040357 6040393 10 130 10.0 0.0 5.0 1.7 164 chr3L 6040229 intergenic Jon65Aiv + chr3L 6040311 intergenic Jon65Aiv + chr3L 6040393 intergenic Jon65Aiv + chr3L_10_6040001 chr3L_6040001 RAL-382 1796 chr3L 6040290 6040393 chr3L 6042723 6042772 Doc 33 2411 0.5 8.0 4.2 6.3 2482 chr3L 6040290 intergenic Jon65Aiv + chr3L 6041531 intergenic not near genes chr3L 6042772 intergenic not near genes chr3L_33_6040001 chr3L_6040001 RAL-382 1797 chr3L 6052125 6052151 chr3L 6052261 6052287 6 136 4.5 10.5 7.5 0.7 162 chr3L 6052125 intergenic Jon65Aii +,Jon65Aiii + chr3L 6052206 intergenic Jon65Aii + chr3L 6052287 intergenic Jon65Aii + chr3L_6_6050001 chr3L_6050001 RAL-382 1798 chr3L 6052626 6052669 chr3L 6052739 6052753 9 112 7.5 7.5 7.5 1.1 127 chr3L 6052626 exon Jon65Aii + chr3L 6052690 intron Jon65Aii + chr3L 6052753 exon Jon65Aii + chr3L_9_6050001 chr3L_6050001 RAL-382 1799 chr3L 6071644 6071706 chr3L 6071953 6072015 33 308 7.5 10.5 9.0 3.3 371 chr3L 6071644 intergenic CG42269 +,CG6602 + chr3L 6071830 intergenic CG42269 +,CG6602 + chr3L 6072015 intergenic CG6602 +,CG42269 + chr3L_33_6070001 chr3L_6070001 RAL-382 1800 chr3L 6116657 6116723 chr3L 6116791 6116857 25 133 8.5 4.5 6.5 3.3 200 chr3L 6116657 intron Ets65A + chr3L 6116757 intron Ets65A + chr3L 6116857 intron Ets65A + chr3L_25_6115001 chr3L_6115001 RAL-382 1801 chr3L 6119094 6119129 chr3L 6119221 6119256 14 127 11.5 0.5 6.0 2.0 162 chr3L 6119094 exon Ets65A + chr3L 6119175 intron Ets65A + chr3L 6119256 intron Ets65A + chr3L_14_6115001 chr3L_6115001 RAL-382 1802 chr3L 6155669 6155713 chr3L 6155805 6155827 25 134 12.5 0.0 6.2 3.5 158 chr3L 6155669 intergenic CR45421 - chr3L 6155748 intergenic not near genes chr3L 6155827 intergenic not near genes chr3L_25_6155001 chr3L_6155001 RAL-382 1803 chr3L 6159827 6159891 chr3L 6159967 6160031 31 139 9.5 10.5 10.0 2.8 204 chr3L 6159827 intergenic not near genes chr3L 6159929 intergenic not near genes chr3L 6160031 intergenic not near genes chr3L_31_6155001 chr3L_6155001 RAL-382 1804 chr3L 6162347 6162365 chr3L 6162477 6162479 5 127 2.5 10.0 6.2 0.7 132 chr3L 6162347 intergenic CR45744 - chr3L 6162413 intergenic CR45744 - chr3L 6162479 intergenic CR45744 - chr3L_5_6160001 chr3L_6160001 RAL-382 1805 chr3L 6220875 6220885 chr3L 6230077 6230087 roo 5 9202 23.0 11.5 17.2 0.3 9212 chr3L 6220875 5` UTR pncr008:3L + chr3L 6225481 intergenic not near genes chr3L 6230087 intergenic not near genes chr3L_5_6225001 chr3L_6225001 RAL-382 1806 chr3L 6220888 6220941 chr3L 6230065 6230143 roo 27 9200 10.0 9.0 9.5 2.6 9255 chr3L 6220888 5` UTR pncr008:3L + chr3L 6225516 intergenic not near genes chr3L 6230143 intergenic not near genes chr3L_27_6225001 chr3L_6225001 RAL-382 1807 chr3L 6288473 6288495 chr3L 6288624 6288646 8 150 14.5 9.0 11.8 0.6 173 chr3L 6288473 intergenic not near genes chr3L 6288560 intergenic not near genes chr3L 6288646 intergenic not near genes chr3L_8_6285001 chr3L_6285001 RAL-382 1808 chr3L 6288503 6288535 chr3L 6288619 6288686 14 146 6.5 8.0 7.2 1.7 183 chr3L 6288503 intergenic not near genes chr3L 6288594 intergenic not near genes chr3L 6288686 intergenic not near genes chr3L_14_6285001 chr3L_6285001 RAL-382 1809 chr3L 6334964 6334973 chr3L 6335485 6335494 297 4 521 13.5 11.5 12.5 0.3 530 chr3L 6334964 intron CG13300 - chr3L 6335229 intron CG13300 - chr3L 6335494 intron CG13300 - chr3L_4_6335001 chr3L_6335001 RAL-382 1810 chr3L 6334974 6335032 chr3L 6335481 6335553 297 24 519 7.0 10.5 8.8 2.4 579 chr3L 6334974 intron CG13300 - chr3L 6335264 intron CG13300 - chr3L 6335553 intron CG13300 - chr3L_24_6335001 chr3L_6335001 RAL-382 1811 chr3L 6405619 6405677 chr3L 6432133 6432191 roo 32 26514 8.5 11.5 10.0 2.9 26572 chr3L 6405619 intron CG42747 + chr3L 6418905 intron CG42747 + chr3L 6432191 intron CG42747 + chr3L_32_6415001 chr3L_6415001 RAL-382 1812 chr3L 6442158 6442230 chr3L 6442322 6442394 38 164 63.5 56.0 59.8 0.6 236 chr3L 6442158 intron CG42747 + chr3L 6442276 intron CG42747 + chr3L 6442394 intron CG42747 + chr3L_38_6440001 chr3L_6440001 RAL-382 1813 chr3L 6443116 6443173 chr3L 6443376 6443433 5 260 6.5 0.0 3.2 1.2 317 chr3L 6443116 intron CG42747 + chr3L 6443274 intron CG42747 + chr3L 6443433 intron CG42747 + chr3L_5_6440001 chr3L_6440001 RAL-382 1814 chr3L 6456308 6456316 chr3L 6456442 6456450 5 134 13.0 24.0 18.5 0.3 142 chr3L 6456308 intron CG42747 + chr3L 6456379 intron CG42747 + chr3L 6456450 intron CG42747 + chr3L_5_6455001 chr3L_6455001 RAL-382 1815 chr3L 6498664 6498673 chr3L 6498799 6498808 7 135 8.0 7.5 7.8 0.8 144 chr3L 6498664 intron sfl + chr3L 6498736 intron sfl + chr3L 6498808 intron sfl + chr3L_7_6495001 chr3L_6495001 RAL-382 1816 chr3L 6513320 6513377 chr3L 6513456 6513513 16 136 5.0 5.0 5.0 2.7 193 chr3L 6513320 intron sfl + chr3L 6513416 intron sfl + chr3L 6513513 intron sfl + chr3L_16_6510001 chr3L_6510001 RAL-382 1817 chr3L 6555789 6555838 chr3L 6555915 6555964 25 126 10.5 14.0 12.2 1.9 175 chr3L 6555789 intron CG18769 + chr3L 6555876 intron CG18769 + chr3L 6555964 intron CG18769 + chr3L_25_6555001 chr3L_6555001 RAL-382 1818 chr3L 6562835 6562865 chr3L 6562945 6562995 18 129 6.0 16.0 11.0 1.5 160 chr3L 6562835 intron CG18769 + chr3L 6562915 intron CG18769 + chr3L 6562995 intron CG18769 + chr3L_18_6560001 chr3L_6560001 RAL-382 1819 chr3L 6604289 6604295 chr3L 6604406 6604422 5 125 3.5 28.0 15.8 0.3 133 chr3L 6604289 intron CG8368 + chr3L 6604356 intron CG8368 + chr3L 6604422 intron,3` UTR CG8368 +,zpg - chr3L_5_6600001 chr3L_6600001 RAL-382 1820 chr3L 6620564 6620598 chr3L 6621054 6621086 Rt1c 12 489 9.5 17.0 13.2 0.8 522 chr3L 6620564 intergenic not near genes chr3L 6620825 intergenic not near genes chr3L 6621086 intergenic not near genes chr3L_12_6620001 chr3L_6620001 RAL-382 1821 chr3L 6623444 6623507 chr3L 6623590 6623615 15 131 4.5 7.5 6.0 2.1 171 chr3L 6623444 intergenic not near genes chr3L 6623530 intergenic not near genes chr3L 6623615 intergenic GluRIA + chr3L_15_6620001 chr3L_6620001 RAL-382 1822 chr3L 6657403 6657466 chr3L 6657601 6657668 18 196 10.0 7.5 8.8 1.8 265 chr3L 6657403 intergenic not near genes chr3L 6657536 intergenic not near genes chr3L 6657668 intergenic not near genes chr3L_18_6655001 chr3L_6655001 RAL-382 1823 chr3L 6726802 6726823 chr3L 6726928 6726949 8 126 0.0 5.0 2.5 2.3 147 chr3L 6726802 intergenic not near genes chr3L 6726876 intergenic not near genes chr3L 6726949 intergenic not near genes chr3L_8_6725001 chr3L_6725001 RAL-382 1824 chr3L 6781075 6781139 chr3L 6783138 6783202 Doc 39 2063 13.5 11.5 12.5 2.9 2127 chr3L 6781075 intergenic not near genes chr3L 6782138 intergenic not near genes chr3L 6783202 intergenic not near genes chr3L_39_6780001 chr3L_6780001 RAL-382 1825 chr3L 6785577 6785615 chr3L 6785737 6785783 14 167 4.0 15.5 9.8 1.3 206 chr3L 6785577 intergenic not near genes chr3L 6785680 intergenic not near genes chr3L 6785783 intergenic not near genes chr3L_14_6785001 chr3L_6785001 RAL-382 1826 chr3L 6808878 6808950 chr3L 6809086 6809158 30 208 6.5 8.0 7.2 3.7 280 chr3L 6808878 intergenic not near genes chr3L 6809018 intergenic not near genes chr3L 6809158 intergenic not near genes chr3L_30_6805001 chr3L_6805001 RAL-382 1827 chr3L 6810040 6810081 chr3L 6810173 6810220 9 135 9.5 12.5 11.0 0.8 180 chr3L 6810040 intergenic not near genes chr3L 6810130 intergenic not near genes chr3L 6810220 intergenic not near genes chr3L_9_6810001 chr3L_6810001 RAL-382 1828 chr3L 6835881 6835924 chr3L 6836009 6836052 9 128 7.5 8.5 8.0 1.0 171 chr3L 6835881 intergenic not near genes chr3L 6835966 intergenic not near genes chr3L 6836052 intergenic not near genes chr3L_9_6835001 chr3L_6835001 RAL-382 1829 chr3L 6855887 6855956 chr3L 6860716 6860733 Doc 13 4828 2.5 5.0 3.8 2.7 4846 chr3L 6855887 intergenic not near genes chr3L 6858310 intergenic not near genes chr3L 6860733 intergenic not near genes chr3L_13_6855001 chr3L_6855001 RAL-382 1830 chr3L 6887473 6887515 chr3L 6895015 6895057 roo 31 7540 12.5 7.5 10.0 2.8 7584 chr3L 6887473 intergenic not near genes chr3L 6891265 intergenic not near genes chr3L 6895057 intergenic not near genes chr3L_31_6890001 chr3L_6890001 RAL-382 1831 chr3L 6907967 6908045 chr3L 6908102 6908172 19 129 3.5 0.0 1.8 6.8 205 chr3L 6907967 intergenic not near genes chr3L 6908070 intergenic not near genes chr3L 6908172 intergenic not near genes chr3L_19_6905001 chr3L_6905001 RAL-382 1832 chr3L 6934295 6934357 chr3L 6934456 6934516 21 161 8.5 6.0 7.2 2.6 221 chr3L 6934295 exon CG14820 + chr3L 6934406 intron CG14820 + chr3L 6934516 exon CG14820 + chr3L_21_6930001 chr3L_6930001 RAL-382 1833 chr3L 6962090 6962160 chr3L 6962219 6962297 14 138 36.5 41.5 39.0 0.3 207 chr3L 6962090 intron sgl - chr3L 6962194 intron sgl - chr3L 6962297 intron sgl - chr3L_14_6960001 chr3L_6960001 RAL-382 1834 chr3L 6958984 6959047 chr3L 6963538 6963581 10 4547 30.5 46.0 38.2 0.3 4597 chr3L 6958984 exon Surf1 + chr3L 6961282 exon sgl - chr3L 6963581 intron sgl - chr3L_10_6960001 chr3L_6960001 RAL-382 1835 chr3L 6974449 6974518 chr3L 6974600 6974649 14 148 7.0 11.0 9.0 1.4 200 chr3L 6974449 exon Galphai - chr3L 6974549 intron Galphai - chr3L 6974649 intron Galphai - chr3L_14_6970001 chr3L_6970001 RAL-382 1836 chr3L 6981900 6981933 chr3L 6982104 6982132 12 204 2.0 5.5 3.8 2.5 232 chr3L 6981900 intergenic not near genes chr3L 6982016 intergenic not near genes chr3L 6982132 intergenic not near genes chr3L_12_6980001 chr3L_6980001 RAL-382 1837 chr3L 6990672 6990752 chr3L 6990799 6990872 19 129 12.0 7.5 9.8 1.8 200 chr3L 6990672 5` UTR bin + chr3L 6990772 5` UTR bin + chr3L 6990872 exon bin + chr3L_19_6990001 chr3L_6990001 RAL-382 1838 chr3L 6994845 6994906 chr3L 6995496 6995567 BS 18 657 1.5 6.0 3.8 3.8 722 chr3L 6994845 intergenic bin + chr3L 6995206 intergenic not near genes chr3L 6995567 intergenic not near genes chr3L_18_6995001 chr3L_6995001 RAL-382 1839 chr3L 7001939 7001972 chr3L 7002109 7002142 12 170 12.0 7.5 9.8 1.1 203 chr3L 7001939 intron Mp + chr3L 7002040 intron Mp + chr3L 7002142 intron Mp + chr3L_12_7000001 chr3L_7000001 RAL-382 1840 chr3L 7007366 7007395 chr3L 7007511 7007540 11 145 0.0 21.0 10.5 1.0 174 chr3L 7007366 intron Mp + chr3L 7007453 intron Mp + chr3L 7007540 intron Mp + chr3L_11_7005001 chr3L_7005001 RAL-382 1841 chr3L 7090846 7090915 chr3L 7090979 7091049 19 133 6.5 6.0 6.2 2.6 203 chr3L 7090846 intergenic not near genes chr3L 7090948 intergenic not near genes chr3L 7091049 intergenic not near genes chr3L_19_7090001 chr3L_7090001 RAL-382 1842 chr3L 7112542 7112602 chr3L 7112679 7112739 21 136 12.0 11.0 11.5 1.7 197 chr3L 7112542 intron form3 + chr3L 7112640 intron form3 + chr3L 7112739 intron form3 + chr3L_21_7110001 chr3L_7110001 RAL-382 1843 chr3L 7130138 7130141 chr3L 7130293 7130296 4 155 10.0 25.0 17.5 0.2 158 chr3L 7130138 intergenic CG15829 + chr3L 7130217 intergenic not near genes chr3L 7130296 intergenic not near genes chr3L_4_7130001 chr3L_7130001 RAL-382 1844 chr3L 7187412 7187423 chr3L 7187495 7187555 5 122 0.0 0.0 0.0 5.0 143 chr3L 7187412 intron Dscam2 - chr3L 7187484 intron Dscam2 - chr3L 7187555 intron Dscam2 - chr3L_5_7185001 chr3L_7185001 RAL-382 1845 chr3L 7262467 7262488 chr3L 7262616 7262632 8 148 12.0 0.0 6.0 1.1 165 chr3L 7262467 intron CG14830 - chr3L 7262550 intron CG14830 - chr3L 7262632 intron CG14830 - chr3L_8_7260001 chr3L_7260001 RAL-382 1846 chr3L 7263285 7263317 chr3L 7263419 7263434 5 125 10.5 3.0 6.8 0.6 149 chr3L 7263285 intron CG14830 - chr3L 7263360 intron CG14830 - chr3L 7263434 intron CG14830 - chr3L_5_7260001 chr3L_7260001 RAL-382 1847 chr3L 7263318 7263360 chr3L 7263414 7263473 12 117 4.0 2.5 3.2 2.9 155 chr3L 7263318 intron CG14830 - chr3L 7263396 intron CG14830 - chr3L 7263473 intron CG14830 - chr3L_12_7260001 chr3L_7260001 RAL-382 1848 chr3L 7264821 7264896 chr3L 7264967 7265029 15 134 0.0 7.5 3.8 3.1 208 chr3L 7264821 intergenic not near genes chr3L 7264925 intergenic not near genes chr3L 7265029 intergenic not near genes chr3L_15_7260001 chr3L_7260001 RAL-382 1849 chr3L 7276107 7276167 chr3L 7276237 7276294 10 128 4.0 12.5 8.2 1.1 187 chr3L 7276107 intron unc-13-4A - chr3L 7276200 intron unc-13-4A - chr3L 7276294 intron unc-13-4A - chr3L_10_7275001 chr3L_7275001 RAL-382 1850 chr3L 7277064 7277135 chr3L 7277216 7277287 30 151 5.5 8.0 6.8 3.8 223 chr3L 7277064 exon unc-13-4A - chr3L 7277176 intron unc-13-4A - chr3L 7277287 intron unc-13-4A - chr3L_30_7275001 chr3L_7275001 RAL-382 1851 chr3L 7285402 7285428 chr3L 7285527 7285556 13 128 0.5 4.5 2.5 3.7 154 chr3L 7285402 intron unc-13-4A - chr3L 7285479 intron unc-13-4A - chr3L 7285556 intron unc-13-4A - chr3L_13_7285001 chr3L_7285001 RAL-382 1852 chr3L 7285429 7285470 chr3L 7285526 7285586 15 125 0.5 4.5 2.5 4.3 157 chr3L 7285429 intron unc-13-4A - chr3L 7285508 intron unc-13-4A - chr3L 7285586 intron unc-13-4A - chr3L_15_7285001 chr3L_7285001 RAL-382 1853 chr3L 7296013 7296084 chr3L 7296587 7296624 20 572 8.0 7.5 7.8 2.3 611 chr3L 7296013 intron unc-13-4A - chr3L 7296318 intron unc-13-4A - chr3L 7296624 intron unc-13-4A - chr3L_20_7295001 chr3L_7295001 RAL-382 1854 chr3L 7377260 7377341 chr3L 7380422 7380481 297 30 3160 5.0 7.5 6.2 4.2 3221 chr3L 7377260 intron SMSr - chr3L 7378870 intron SMSr - chr3L 7380481 intron SMSr - chr3L_30_7375001 chr3L_7375001 RAL-382 1855 chr3L 7390675 7390728 chr3L 7390806 7390859 18 130 5.5 13.0 9.2 1.8 184 chr3L 7390675 intergenic CG8563 + chr3L 7390767 5` UTR CG8563 + chr3L 7390859 5` UTR CG8563 + chr3L_18_7390001 chr3L_7390001 RAL-382 1856 chr3L 7393077 7393150 chr3L 7393301 7393374 21 223 5.5 6.0 5.8 3.1 297 chr3L 7393077 intron CG8563 + chr3L 7393226 intron CG8563 + chr3L 7393374 intron CG8563 + chr3L_21_7390001 chr3L_7390001 RAL-382 1857 chr3L 7422886 7422898 chr3L 7423023 7423035 5 137 10.5 0.0 5.2 0.8 149 chr3L 7422886 intergenic not near genes chr3L 7422960 intergenic not near genes chr3L 7423035 intergenic not near genes chr3L_5_7420001 chr3L_7420001 RAL-382 1858 chr3L 7425972 7426038 chr3L 7426404 7426454 21 430 9.0 9.0 9.0 2.1 482 chr3L 7425972 intron CG42458 + chr3L 7426213 intron CG42458 + chr3L 7426454 intron CG42458 + chr3L_21_7425001 chr3L_7425001 RAL-382 1859 chr3L 7443973 7444048 chr3L 7444121 7444188 20 145 7.5 0.0 3.8 4.2 215 chr3L 7443973 intron CG42458 + chr3L 7444080 intron CG42458 + chr3L 7444188 intron CG42458 + chr3L_20_7440001 chr3L_7440001 RAL-382 1860 chr3L 7498718 7498776 chr3L 7503544 7503603 F-element 33 4827 12.0 13.5 12.8 2.4 4885 chr3L 7498718 5` UTR CG8539 - chr3L 7501160 intergenic not near genes chr3L 7503603 intergenic not near genes chr3L_33_7500001 chr3L_7500001 RAL-382 1861 chr3L 7505396 7505443 chr3L 7505523 7505570 11 127 7.5 6.5 7.0 1.4 174 chr3L 7505396 intergenic CG7548 - chr3L 7505483 intergenic CG7548 - chr3L 7505570 3` UTR CG7548 - chr3L_11_7505001 chr3L_7505001 RAL-382 1862 chr3L 7508629 7508704 chr3L 7508763 7508833 37 131 9.5 0.5 5.0 6.2 204 chr3L 7508629 intergenic not near genes chr3L 7508731 intergenic not near genes chr3L 7508833 intergenic not near genes chr3L_37_7505001 chr3L_7505001 RAL-382 1863 chr3L 7574797 7574859 chr3L 7574937 7574986 7 136 0.0 8.0 4.0 1.4 189 chr3L 7574797 intergenic not near genes chr3L 7574892 intergenic not near genes chr3L 7574986 intergenic not near genes chr3L_7_7570001 chr3L_7570001 RAL-382 1864 chr3L 7581585 7581608 chr3L 7581714 7581742 7 131 16.0 7.0 11.5 0.6 157 chr3L 7581585 intergenic not near genes chr3L 7581664 intergenic not near genes chr3L 7581742 intergenic not near genes chr3L_7_7580001 chr3L_7580001 RAL-382 1865 chr3L 7581610 7581654 chr3L 7581712 7581750 13 108 3.5 7.0 5.2 2.1 140 chr3L 7581610 intergenic not near genes chr3L 7581680 intergenic not near genes chr3L 7581750 intergenic not near genes chr3L_13_7580001 chr3L_7580001 RAL-382 1866 chr3L 7591111 7591171 chr3L 7591252 7591312 14 137 8.0 5.0 6.5 1.9 201 chr3L 7591111 intergenic CG7716 - chr3L 7591212 intergenic CG7716 - chr3L 7591312 intergenic CG7716 - chr3L_14_7590001 chr3L_7590001 RAL-382 1867 chr3L 7630403 7630441 chr3L 7630779 7630838 20 394 6.0 5.5 5.8 2.9 435 chr3L 7630403 intron CG33275 + chr3L 7630620 intron CG33275 + chr3L 7630838 intron CG33275 + chr3L_20_7630001 chr3L_7630001 RAL-382 1868 chr3L 7726430 7726442 chr3L 7726670 7726682 7 240 14.0 6.0 10.0 0.6 252 chr3L 7726430 intron,5` UTR CG32373 +,CG7457 - chr3L 7726556 intron CG32373 + chr3L 7726682 intron CG32373 + chr3L_7_7725001 chr3L_7725001 RAL-382 1869 chr3L 7726446 7726504 chr3L 7726669 7726744 15 238 3.5 6.0 4.8 2.6 298 chr3L 7726446 intron,5` UTR CG32373 +,CG7457 - chr3L 7726595 intron CG32373 + chr3L 7726744 intron CG32373 + chr3L_15_7725001 chr3L_7725001 RAL-382 1870 chr3L 7793672 7793735 chr3L 7800773 7800837 297 28 7101 13.5 9.5 11.5 2.2 7165 chr3L 7793672 intron CG32369 - chr3L 7797254 intron CG32369 - chr3L 7800837 intron CG32369 - chr3L_28_7795001 chr3L_7795001 RAL-382 1871 chr3L 7803074 7803146 chr3L 7803202 7803274 14 128 7.5 8.0 7.8 1.6 200 chr3L 7803074 intron CG32369 - chr3L 7803174 intron CG32369 - chr3L 7803274 exon CG32369 - chr3L_14_7800001 chr3L_7800001 RAL-382 1872 chr3L 7833184 7833209 chr3L 7833606 7833631 10 422 7.5 0.0 3.8 2.1 447 chr3L 7833184 intron Pdp1 - chr3L 7833408 intron Pdp1 - chr3L 7833631 intron Pdp1 - chr3L_10_7830001 chr3L_7830001 RAL-382 1873 chr3L 7843115 7843159 chr3L 7843257 7843301 19 142 10.0 5.5 7.8 2.2 186 chr3L 7843115 intron Pdp1 - chr3L 7843208 intron Pdp1 - chr3L 7843301 intron Pdp1 - chr3L_19_7840001 chr3L_7840001 RAL-382 1874 chr3L 7845344 7845416 chr3L 7845477 7845548 25 132 11.0 10.0 10.5 2.2 204 chr3L 7845344 intron Pdp1 - chr3L 7845446 intron Pdp1 - chr3L 7845548 intron Pdp1 - chr3L_25_7845001 chr3L_7845001 RAL-382 1875 chr3L 7857297 7857372 chr3L 7857425 7857500 31 128 8.0 8.0 8.0 3.4 203 chr3L 7857297 intron Pdp1 - chr3L 7857398 intron Pdp1 - chr3L 7857500 intron Pdp1 - chr3L_31_7855001 chr3L_7855001 RAL-382 1876 chr3L 7869625 7869643 chr3L 7869752 7869758 5 124 22.0 0.0 11.0 0.4 133 chr3L 7869625 exon CG32365 + chr3L 7869692 exon CG32365 + chr3L 7869758 exon CG32365 + chr3L_5_7865001 chr3L_7865001 RAL-382 1877 chr3L 7886517 7886542 chr3L 7889086 7889101 Stalker4 14 2568 1.0 23.5 12.2 1.1 2584 chr3L 7886517 intron CG32365 + chr3L 7887809 intron CG32365 + chr3L 7889101 intron CG32365 + chr3L_14_7885001 chr3L_7885001 RAL-382 1878 chr3L 7915951 7916118 chr3L 7916111 7916327 34 240 0.0 0.0 0.0 34.0 376 chr3L 7915951 intergenic CG32368 + chr3L 7916139 intergenic CG32368 + chr3L 7916327 intergenic syd -,CG32368 + chr3L_34_7915001 chr3L_7915001 RAL-382 1879 chr3L 7916784 7916851 chr3L 7926005 7926072 roo 37 9221 14.5 14.0 14.2 2.4 9288 chr3L 7916784 3` UTR syd - chr3L 7921428 intron syd - chr3L 7926072 3` UTR syd - chr3L_37_7920001 chr3L_7920001 RAL-382 1880 chr3L 7985326 7985335 chr3L 7987704 7987713 NOF 5 2378 27.5 12.0 19.8 0.2 2387 chr3L 7985326 intron nmo + chr3L 7986520 intron nmo + chr3L 7987713 intron nmo + chr3L_5_7985001 chr3L_7985001 RAL-382 1881 chr3L 7985339 7985386 chr3L 7987699 7987758 NOF 23 2375 14.5 11.0 12.8 1.7 2419 chr3L 7985339 intron nmo + chr3L 7986548 intron nmo + chr3L 7987758 intron nmo + chr3L_23_7985001 chr3L_7985001 RAL-382 1882 chr3L 8024647 8024652 chr3L 8024774 8024779 5 127 19.5 9.0 14.2 0.3 132 chr3L 8024647 intron nmo + chr3L 8024713 intron nmo + chr3L 8024779 intron nmo + chr3L_5_8020001 chr3L_8020001 RAL-382 1883 chr3L 8062804 8062841 chr3L 8062933 8062970 13 129 13.5 11.0 12.2 1.0 166 chr3L 8062804 intergenic not near genes chr3L 8062887 intergenic not near genes chr3L 8062970 intergenic not near genes chr3L_13_8060001 chr3L_8060001 RAL-382 1884 chr3L 8064561 8064633 chr3L 8064825 8064899 29 265 5.5 10.0 7.8 3.3 338 chr3L 8064561 intron Ect4 + chr3L 8064730 intron Ect4 + chr3L 8064899 intron Ect4 + chr3L_29_8060001 chr3L_8060001 RAL-382 1885 chr3L 8207069 8207141 chr3L 8207200 8207272 30 131 8.0 6.0 7.0 3.8 203 chr3L 8207069 intergenic not near genes chr3L 8207170 intergenic not near genes chr3L 8207272 intergenic not near genes chr3L_30_8205001 chr3L_8205001 RAL-382 1886 chr3L 8219318 8219365 chr3L 8219444 8219491 14 125 9.0 6.0 7.5 1.6 173 chr3L 8219318 intergenic CG13674 - chr3L 8219404 intergenic CG13674 - chr3L 8219491 intergenic not near genes chr3L_14_8215001 chr3L_8215001 RAL-382 1887 chr3L 8233540 8233578 chr3L 8238854 8238890 Rt1a 14 5310 11.0 11.0 11.0 1.2 5350 chr3L 8233540 intron CG7213 - chr3L 8236215 intron CG7213 - chr3L 8238890 intron,intron CG7213 -,Dscam4 + chr3L_14_8235001 chr3L_8235001 RAL-382 1888 chr3L 8295752 8295816 chr3L 8295956 8296024 19 205 5.5 8.0 6.8 2.4 272 chr3L 8295752 intergenic CG7201 - chr3L 8295888 intergenic not near genes chr3L 8296024 intergenic not near genes chr3L_19_8295001 chr3L_8295001 RAL-382 1889 chr3L 8364481 8364528 chr3L 8364622 8364669 25 141 14.0 14.0 14.0 1.7 188 chr3L 8364481 intergenic not near genes chr3L 8364575 intergenic not near genes chr3L 8364669 intergenic not near genes chr3L_25_8360001 chr3L_8360001 RAL-382 1890 chr3L 8369875 8369921 chr3L 8370002 8370029 20 123 14.0 17.5 15.8 1.2 154 chr3L 8369875 intergenic not near genes chr3L 8369952 intergenic not near genes chr3L 8370029 intergenic not near genes chr3L_20_8365001 chr3L_8365001 RAL-382 1891 chr3L 8383965 8384008 chr3L 8384062 8384106 12 103 4.5 8.0 6.2 1.7 141 chr3L 8383965 intron ImpE1 + chr3L 8384036 intron ImpE1 + chr3L 8384106 intron ImpE1 + chr3L_12_8380001 chr3L_8380001 RAL-382 1892 chr3L 8395792 8395869 chr3L 8395938 8395965 16 140 6.0 7.0 6.5 2.1 173 chr3L 8395792 intergenic CG7120 + chr3L 8395878 intergenic CG7120 + chr3L 8395965 intergenic CG7120 + chr3L_16_8395001 chr3L_8395001 RAL-382 1893 chr3L 8442898 8442901 chr3L 8443024 8443027 4 126 0.0 22.5 11.2 0.3 129 chr3L 8442898 intergenic CG6983 - chr3L 8442962 intergenic CG6983 - chr3L 8443027 intergenic CG6983 - chr3L_4_8440001 chr3L_8440001 RAL-382 1894 chr3L 8443522 8443578 chr3L 8443653 8443710 19 132 11.0 8.5 9.8 1.8 188 chr3L 8443522 3` UTR CG6983 - chr3L 8443616 3` UTR CG6983 - chr3L 8443710 3` UTR CG6983 - chr3L_19_8440001 chr3L_8440001 RAL-382 1895 chr3L 8481768 8481805 chr3L 8490929 8490964 roo 9 9172 6.5 5.0 5.8 1.3 9196 chr3L 8481768 intron CG43163 - chr3L 8486366 intron CG43163 - chr3L 8490964 intron CG43163 - chr3L_9_8485001 chr3L_8485001 RAL-382 1896 chr3L 8498259 8498262 chr3L 8505776 8505779 blood 4 7517 27.0 13.5 20.2 0.2 7520 chr3L 8498259 intron CG43163 - chr3L 8502019 intron CG43163 - chr3L 8505779 intron CG43163 - chr3L_4_8500001 chr3L_8500001 RAL-382 1897 chr3L 8498269 8498321 chr3L 8505769 8505837 blood 23 7516 11.0 13.0 12.0 1.8 7568 chr3L 8498269 intron CG43163 - chr3L 8502053 intron CG43163 - chr3L 8505837 intron CG43163 - chr3L_23_8500001 chr3L_8500001 RAL-382 1898 chr3L 8551681 8551771 chr3L 8551822 8551901 35 131 0.5 7.0 3.8 7.3 220 chr3L 8551681 intron rhea + chr3L 8551791 intron rhea + chr3L 8551901 intron rhea + chr3L_35_8550001 chr3L_8550001 RAL-382 1899 chr3L 8561173 8561230 chr3L 8561302 8561359 12 129 2.0 12.5 7.2 1.5 186 chr3L 8561173 intron rhea + chr3L 8561266 intron rhea + chr3L 8561359 5` UTR rhea + chr3L_12_8560001 chr3L_8560001 RAL-382 1900 chr3L 8591240 8591279 chr3L 8591387 8591457 7 173 3.5 4.5 4.0 1.4 217 chr3L 8591240 intron CG43078 + chr3L 8591348 intron CG43078 + chr3L 8591457 intron CG43078 + chr3L_7_8590001 chr3L_8590001 RAL-382 1901 chr3L 8644638 8644655 chr3L 8644701 8644752 4 101 0.0 6.5 3.2 1.0 114 chr3L 8644638 intergenic CG13305 - chr3L 8644695 intergenic CG13305 - chr3L 8644752 intergenic CG13305 - chr3L_4_8640001 chr3L_8640001 RAL-382 1902 chr3L 8692951 8692956 chr3L 8693107 8693112 4 156 24.5 15.5 20.0 0.2 161 chr3L 8692951 5` UTR CR44526 + chr3L 8693032 5` UTR CR44526 + chr3L 8693112 5` UTR CR44526 + chr3L_4_8690001 chr3L_8690001 RAL-382 1903 chr3L 8692957 8693019 chr3L 8693104 8693175 33 155 9.5 15.0 12.2 2.5 218 chr3L 8692957 5` UTR CR44526 + chr3L 8693066 5` UTR CR44526 + chr3L 8693175 5` UTR CR44526 + chr3L_33_8690001 chr3L_8690001 RAL-382 1904 chr3L 8791283 8791304 chr3L 8796752 8796773 I-element 13 5469 10.0 14.0 12.0 1.0 5490 chr3L 8791283 exon Fhos + chr3L 8794028 intron Fhos + chr3L 8796773 intron Fhos + chr3L_13_8790001 chr3L_8790001 RAL-382 1905 chr3L 8827482 8827535 chr3L 8827616 8827640 17 131 6.5 13.5 10.0 1.5 158 chr3L 8827482 intergenic dally + chr3L 8827561 5` UTR dally + chr3L 8827640 5` UTR dally + chr3L_17_8825001 chr3L_8825001 RAL-382 1906 chr3L 8830707 8830780 chr3L 8830851 8830903 20 145 8.5 3.5 6.0 2.9 196 chr3L 8830707 intron dally + chr3L 8830805 intron dally + chr3L 8830903 intron dally + chr3L_20_8830001 chr3L_8830001 RAL-382 1907 chr3L 8839717 8839754 chr3L 8839856 8839893 22 139 10.0 7.0 8.5 2.3 176 chr3L 8839717 intron dally + chr3L 8839805 intron dally + chr3L 8839893 intron dally + chr3L_22_8835001 chr3L_8835001 RAL-382 1908 chr3L 8849179 8849239 chr3L 8849309 8849359 12 129 5.5 10.5 8.0 1.3 180 chr3L 8849179 intron dally + chr3L 8849269 intron dally + chr3L 8849359 intron dally + chr3L_12_8845001 chr3L_8845001 RAL-382 1909 chr3L 8861464 8861552 chr3L 8861614 8861692 30 145 0.0 7.5 3.8 6.2 228 chr3L 8861464 intron dally + chr3L 8861578 intron dally + chr3L 8861692 intron dally + chr3L_30_8860001 chr3L_8860001 RAL-382 1910 chr3L 8884353 8884426 chr3L 8884602 8884675 8 243 4.5 3.0 3.8 1.7 322 chr3L 8884353 intron dally + chr3L 8884514 intron dally + chr3L 8884675 intron dally + chr3L_8_8880001 chr3L_8880001 RAL-382 1911 chr3L 8924385 8924463 chr3L 8924518 8924557 25 126 8.0 6.5 7.2 3.0 172 chr3L 8924385 intron Tsp66E + chr3L 8924471 intron Tsp66E + chr3L 8924557 intron Tsp66E + chr3L_25_8920001 chr3L_8920001 RAL-382 1912 chr3L 8928218 8928294 chr3L 8928344 8928420 29 126 7.5 8.0 7.8 3.3 202 chr3L 8928218 intron Tsp66E + chr3L 8928319 intron Tsp66E + chr3L 8928420 intron Tsp66E + chr3L_29_8925001 chr3L_8925001 RAL-382 1913 chr3L 8950508 8950581 chr3L 8950652 8950723 30 141 8.0 12.0 10.0 2.7 215 chr3L 8950508 intron,intron CG43783 -,orb2 - chr3L 8950616 intron,intron CG43783 -,orb2 - chr3L 8950723 intron,intron CG43783 -,orb2 - chr3L_30_8950001 chr3L_8950001 RAL-382 1914 chr3L 8959349 8959360 chr3L 8959560 8959571 6 211 21.0 3.0 12.0 0.5 222 chr3L 8959349 intron CG13313 + chr3L 8959460 intron CG13313 + chr3L 8959571 intron CG13313 + chr3L_6_8955001 chr3L_8955001 RAL-382 1915 chr3L 9013690 9013696 chr3L 18417066 18417066 7 9403374 42.0 24.5 33.2 0.2 9403376 chr3L 9013690 intron Doc2 - chr3L 13715378 intron bru-3 - chr3L 18417066 intergenic not near genes chr3L_7_13715001 chr3L_13715001 RAL-382 1916 chr3L 9030379 9030446 chr3L 9030508 9030575 20 129 7.0 6.5 6.8 2.6 196 chr3L 9030379 intergenic not near genes chr3L 9030477 intergenic not near genes chr3L 9030575 intergenic not near genes chr3L_20_9030001 chr3L_9030001 RAL-382 1917 chr3L 9036251 9036287 chr3L 9036382 9036421 7 131 17.0 11.5 14.2 0.5 170 chr3L 9036251 intergenic not near genes chr3L 9036336 intergenic not near genes chr3L 9036421 intergenic not near genes chr3L_7_9035001 chr3L_9035001 RAL-382 1918 chr3L 9072849 9072850 chr3L 9073001 9073003 4 153 10.0 0.0 5.0 0.7 154 chr3L 9072849 intergenic CG4911 -,CG4942 + chr3L 9072926 intergenic CG4942 +,CG4911 - chr3L 9073003 intergenic CG4942 +,CG4911 - chr3L_4_9070001 chr3L_9070001 RAL-382 1919 chr3L 9076894 9076959 chr3L 9084775 9084843 412 15 7884 8.5 7.0 7.8 1.7 7949 chr3L 9076894 exon Tequila + chr3L 9080868 intron Tequila + chr3L 9084843 exon Tequila + chr3L_15_9080001 chr3L_9080001 RAL-382 1920 chr3L 9115198 9115272 chr3L 9115329 9115403 15 132 5.5 8.0 6.8 1.9 205 chr3L 9115198 intron bol - chr3L 9115300 intron bol - chr3L 9115403 intron bol - chr3L_15_9115001 chr3L_9115001 RAL-382 1921 chr3L 9130520 9130576 chr3L 9134331 9134352 412 16 3801 5.5 7.0 6.2 2.2 3832 chr3L 9130520 intergenic bol - chr3L 9132436 intergenic not near genes chr3L 9134352 intergenic Dhpr + chr3L_16_9130001 chr3L_9130001 RAL-382 1922 chr3L 9164656 9164682 chr3L 9166173 9166199 hobo 21 1517 18.0 0.0 9.0 2.1 1543 chr3L 9164656 intron Rdl - chr3L 9165428 intron Rdl - chr3L 9166199 intron Rdl - chr3L_21_9165001 chr3L_9165001 RAL-382 1923 chr3L 9191834 9191899 chr3L 9191974 9192039 20 138 9.0 9.5 9.2 2.0 205 chr3L 9191834 intergenic not near genes chr3L 9191936 intergenic not near genes chr3L 9192039 intergenic not near genes chr3L_20_9190001 chr3L_9190001 RAL-382 1924 chr3L 9219209 9219211 chr3L 9219931 9219933 jockey 4 722 17.5 10.0 13.8 0.3 724 chr3L 9219209 intergenic not near genes chr3L 9219571 intergenic not near genes chr3L 9219933 intergenic not near genes chr3L_4_9215001 chr3L_9215001 RAL-382 1925 chr3L 9219214 9219265 chr3L 9219921 9219960 jockey 19 715 9.5 10.0 9.8 1.8 746 chr3L 9219214 intergenic not near genes chr3L 9219587 intergenic not near genes chr3L 9219960 intergenic not near genes chr3L_19_9215001 chr3L_9215001 RAL-382 1926 chr3L 9247196 9247206 chr3L 9247351 9247361 4 155 17.0 5.5 11.2 0.3 165 chr3L 9247196 intergenic not near genes chr3L 9247278 intergenic not near genes chr3L 9247361 intergenic not near genes chr3L_4_9245001 chr3L_9245001 RAL-382 1927 chr3L 9247208 9247214 chr3L 9247348 9247369 4 148 13.5 5.0 9.2 0.4 161 chr3L 9247208 intergenic not near genes chr3L 9247288 intergenic not near genes chr3L 9247369 intergenic not near genes chr3L_4_9245001 chr3L_9245001 RAL-382 1928 chr3L 9270575 9270650 chr3L 9278380 9278409 roo 20 7800 8.0 7.0 7.5 2.4 7834 chr3L 9270575 intron GluRIB + chr3L 9274492 intron GluRIB + chr3L 9278409 exon GluRIB + chr3L_20_9270001 chr3L_9270001 RAL-382 1929 chr3L 9307796 9307796 chr3L 22908066 22908066 4 13600270 20.0 37.5 28.8 0.1 13600270 chr3L 9307796 intergenic not near genes chr3L 16107931 intron Zn72D - chr3L 22908066 intergenic not near genes chr3L_4_16105001 chr3L_16105001 RAL-382 1930 chr3L 9348607 9348641 chr3L 9348799 9348822 12 193 14.0 15.0 14.5 0.8 215 chr3L 9348607 intergenic PGRP-LC + chr3L 9348714 intergenic PGRP-LC + chr3L 9348822 intergenic PGRP-LC + chr3L_12_9345001 chr3L_9345001 RAL-382 1931 chr3L 9390801 9390824 chr3L 9390981 9391004 13 180 13.5 8.5 11.0 1.1 203 chr3L 9390801 intron CG4080 - chr3L 9390902 intron CG4080 - chr3L 9391004 intron CG4080 - chr3L_13_9390001 chr3L_9390001 RAL-382 1932 chr3L 9429457 9429539 chr3L 9429601 9429680 7 144 3.0 5.0 4.0 1.4 223 chr3L 9429457 intron,3` UTR RpS17 -,snoRNA:Psi28S-612 - chr3L 9429568 intron RpS17 - chr3L 9429680 intron RpS17 - chr3L_7_9425001 chr3L_9425001 RAL-382 1933 chr3L 9443490 9443527 chr3L 9445331 9445368 S-element 11 1841 11.0 15.0 13.0 0.8 1878 chr3L 9443490 intron CG33926 + chr3L 9444429 intron CG33926 + chr3L 9445368 intron CG33926 + chr3L_11_9440001 chr3L_9440001 RAL-382 1934 chr3L 9501658 9501734 chr3L 9502193 9502248 roo 16 527 9.5 0.5 5.0 2.7 590 chr3L 9501658 intron path - chr3L 9501953 intron path - chr3L 9502248 intron path - chr3L_16_9500001 chr3L_9500001 RAL-382 1935 chr3L 9506673 9506699 chr3L 9506807 9506833 12 134 8.0 17.0 12.5 0.9 160 chr3L 9506673 intergenic CG3408 - chr3L 9506753 intergenic CG3408 - chr3L 9506833 3` UTR CG3408 - chr3L_12_9505001 chr3L_9505001 RAL-382 1936 chr3L 9510864 9510955 chr3L 9511007 9511068 25 137 0.5 8.0 4.2 4.8 204 chr3L 9510864 intron RpS9 - chr3L 9510966 intron RpS9 - chr3L 9511068 exon RpS9 - chr3L_25_9510001 chr3L_9510001 RAL-382 1937 chr3L 9513412 9513467 chr3L 9513549 9513604 23 137 6.5 9.5 8.0 2.6 192 chr3L 9513412 intergenic CG33702 - chr3L 9513508 intergenic CG33702 - chr3L 9513604 intergenic CG33702 - chr3L_23_9510001 chr3L_9510001 RAL-382 1938 chr3L 9526445 9526501 chr3L 9528175 9528231 Doc 30 1730 13.5 9.5 11.5 2.4 1786 chr3L 9526445 intergenic not near genes chr3L 9527338 intergenic not near genes chr3L 9528231 intergenic not near genes chr3L_30_9525001 chr3L_9525001 RAL-382 1939 chr3L 9533716 9533783 chr3L 9541325 9541361 412 16 7595 5.0 11.5 8.2 1.7 7645 chr3L 9533716 intergenic not near genes chr3L 9537538 intergenic not near genes chr3L 9541361 intergenic not near genes chr3L_16_9535001 chr3L_9535001 RAL-382 1940 chr3L 9559986 9560014 chr3L 9560107 9560145 14 130 0.0 14.0 7.0 1.8 159 chr3L 9559986 intron CG42673 + chr3L 9560066 intron CG42673 + chr3L 9560145 intron CG42673 + chr3L_14_9560001 chr3L_9560001 RAL-382 1941 chr3L 9575867 9575894 chr3L 9580995 9581002 jockey 11 5125 18.5 7.0 12.8 0.8 5135 chr3L 9575867 intron CG42673 + chr3L 9578434 intron CG42673 + chr3L 9581002 intron CG42673 + chr3L_11_9575001 chr3L_9575001 RAL-382 1942 chr3L 9575904 9575938 chr3L 9580985 9581067 jockey 15 5122 8.5 4.0 6.2 2.1 5163 chr3L 9575904 intron CG42673 + chr3L 9578486 intron CG42673 + chr3L 9581067 intron CG42673 + chr3L_15_9575001 chr3L_9575001 RAL-382 1943 chr3L 9676142 9676181 chr3L 9676275 9676304 12 136 13.0 0.5 6.8 1.5 162 chr3L 9676142 intron fry - chr3L 9676223 intron fry - chr3L 9676304 intron fry - chr3L_12_9675001 chr3L_9675001 RAL-382 1944 chr3L 9676185 9676209 chr3L 9676270 9676360 8 142 8.0 0.0 4.0 1.6 175 chr3L 9676185 intron fry - chr3L 9676272 intron fry - chr3L 9676360 intron fry - chr3L_8_9675001 chr3L_9675001 RAL-382 1945 chr3L 9754699 9754706 chr3L 9754833 9754840 4 134 8.0 0.0 4.0 0.8 141 chr3L 9754699 intron CG42268 - chr3L 9754770 intron CG42268 - chr3L 9754840 intron CG42268 - chr3L_4_9750001 chr3L_9750001 RAL-382 1946 chr3L 9817582 9817660 chr3L 9817712 9817790 17 130 6.0 7.0 6.5 2.3 208 chr3L 9817582 intron CG43897 + chr3L 9817686 intron CG43897 + chr3L 9817790 intron CG43897 + chr3L_17_9815001 chr3L_9815001 RAL-382 1947 chr3L 9848486 9848537 chr3L 9848592 9848635 9 100 8.5 4.0 6.2 1.2 149 chr3L 9848486 intron RasGAP1 - chr3L 9848560 intron RasGAP1 - chr3L 9848635 intron RasGAP1 - chr3L_9_9845001 chr3L_9845001 RAL-382 1948 chr3L 9929627 9929635 chr3L 9938452 9938464 roo 4 8828 19.0 9.5 14.2 0.3 8837 chr3L 9929627 intron CG34356 + chr3L 9934046 intron CG34356 + chr3L 9938464 intron CG34356 + chr3L_4_9930001 chr3L_9930001 RAL-382 1949 chr3L 9929639 9929699 chr3L 9938449 9938470 roo 26 8821 10.0 8.5 9.2 2.5 8831 chr3L 9929639 intron CG34356 + chr3L 9934054 intron CG34356 + chr3L 9938470 intron CG34356 + chr3L_26_9930001 chr3L_9930001 RAL-382 1950 chr3L 9994055 9994077 chr3L 9994190 9994213 10 136 16.0 14.0 15.0 0.6 158 chr3L 9994055 intron dpr6 + chr3L 9994134 intron dpr6 + chr3L 9994213 intron dpr6 + chr3L_10_9990001 chr3L_9990001 RAL-382 1951 chr3L 10002894 10002945 chr3L 10003039 10003090 13 142 2.0 0.0 1.0 6.5 196 chr3L 10002894 intron dpr6 + chr3L 10002992 intron dpr6 + chr3L 10003090 intron dpr6 + chr3L_13_10000001 chr3L_10000001 RAL-382 1952 chr3L 10032501 10032568 chr3L 10032632 10032701 7 135 0.0 5.0 2.5 2.0 200 chr3L 10032501 intron dpr6 + chr3L 10032601 intron dpr6 + chr3L 10032701 intron dpr6 + chr3L_7_10030001 chr3L_10030001 RAL-382 1953 chr3L 10060078 10060117 chr3L 10067706 10067746 17.6 14 7628 15.5 15.0 15.2 0.9 7668 chr3L 10060078 intron dpr6 + chr3L 10063912 intron dpr6 + chr3L 10067746 intron dpr6 + chr3L_14_10060001 chr3L_10060001 RAL-382 1954 chr3L 10077709 10077713 chr3L 10077839 10077840 6 130 19.0 0.0 9.5 0.6 131 chr3L 10077709 intron dpr6 + chr3L 10077774 intron dpr6 + chr3L 10077840 intron dpr6 + chr3L_6_10075001 chr3L_10075001 RAL-382 1955 chr3L 10085416 10085466 chr3L 10085574 10085624 21 157 7.5 8.5 8.0 2.3 208 chr3L 10085416 intron dpr6 + chr3L 10085520 intron dpr6 + chr3L 10085624 intron dpr6 + chr3L_21_10085001 chr3L_10085001 RAL-382 1956 chr3L 10095463 10095533 chr3L 10096861 10096884 29 1395 5.0 9.5 7.2 3.5 1421 chr3L 10095463 intron dpr6 + chr3L 10096174 intron,exon dpr6 +,CG42825 - chr3L 10096884 intron,exon dpr6 +,CG42825 - chr3L_29_10095001 chr3L_10095001 RAL-382 1957 chr3L 10148354 10148429 chr3L 10148490 10148565 24 132 4.0 6.0 5.0 4.0 211 chr3L 10148354 3` UTR dpr10 - chr3L 10148460 3` UTR dpr10 - chr3L 10148565 3` UTR dpr10 - chr3L_24_10145001 chr3L_10145001 RAL-382 1958 chr3L 10165618 10165625 chr3L 10165744 10165746 4 125 17.0 0.5 8.8 0.4 128 chr3L 10165618 intron dpr10 - chr3L 10165682 intron dpr10 - chr3L 10165746 intron dpr10 - chr3L_4_10165001 chr3L_10165001 RAL-382 1959 chr3L 10186629 10186642 chr3L 10186768 10186775 7 138 20.0 0.0 10.0 0.6 146 chr3L 10186629 intergenic not near genes chr3L 10186702 intergenic not near genes chr3L 10186775 intergenic not near genes chr3L_7_10185001 chr3L_10185001 RAL-382 1960 chr3L 10300743 10300797 chr3L 10300878 10300932 24 134 10.5 1.0 5.8 3.5 189 chr3L 10300743 intergenic not near genes chr3L 10300838 intergenic not near genes chr3L 10300932 intergenic not near genes chr3L_24_10300001 chr3L_10300001 RAL-382 1961 chr3L 10308704 10308764 chr3L 10308831 10308888 21 125 1.0 6.5 3.8 4.4 184 chr3L 10308704 intergenic not near genes chr3L 10308796 intergenic not near genes chr3L 10308888 intergenic not near genes chr3L_21_10305001 chr3L_10305001 RAL-382 1962 chr3L 10386338 10386414 chr3L 10386465 10386541 36 126 10.0 6.0 8.0 4.0 203 chr3L 10386338 intergenic CR45245 + chr3L 10386440 intergenic CR45245 + chr3L 10386541 5` UTR CR45245 + chr3L_36_10385001 chr3L_10385001 RAL-382 1963 chr3L 10414894 10414968 chr3L 10417314 10417363 Doc 19 2418 7.5 6.5 7.0 2.4 2469 chr3L 10414894 intergenic CG12362 + chr3L 10416128 intergenic not near genes chr3L 10417363 intergenic not near genes chr3L_19_10415001 chr3L_10415001 RAL-382 1964 chr3L 10417531 10417594 chr3L 10417658 10417711 16 118 6.0 9.0 7.5 1.9 180 chr3L 10417531 intergenic not near genes chr3L 10417621 intergenic not near genes chr3L 10417711 intergenic not near genes chr3L_16_10415001 chr3L_10415001 RAL-382 1965 chr3L 10440165 10440195 chr3L 10440297 10440327 11 132 18.5 4.5 11.5 0.9 162 chr3L 10440165 intergenic not near genes chr3L 10440246 intergenic not near genes chr3L 10440327 intergenic not near genes chr3L_11_10440001 chr3L_10440001 RAL-382 1966 chr3L 10440198 10440234 chr3L 10440296 10440366 14 123 8.0 4.5 6.2 1.9 168 chr3L 10440198 intergenic not near genes chr3L 10440282 intergenic not near genes chr3L 10440366 intergenic not near genes chr3L_14_10440001 chr3L_10440001 RAL-382 1967 chr3L 10455756 10455827 chr3L 10455931 10456002 41 175 9.5 9.0 9.2 4.0 246 chr3L 10455756 intergenic not near genes chr3L 10455879 intergenic not near genes chr3L 10456002 intergenic not near genes chr3L_41_10455001 chr3L_10455001 RAL-382 1968 chr3L 10470242 10470267 chr3L 10470334 10470404 12 132 4.0 6.0 5.0 2.0 162 chr3L 10470242 intergenic not near genes chr3L 10470323 intergenic not near genes chr3L 10470404 intergenic not near genes chr3L_12_10470001 chr3L_10470001 RAL-382 1969 chr3L 10501994 10502047 chr3L 10502140 10502166 13 143 7.5 8.0 7.8 1.5 172 chr3L 10501994 intron A2bp1 + chr3L 10502080 intron A2bp1 + chr3L 10502166 intron A2bp1 + chr3L_13_10500001 chr3L_10500001 RAL-382 1970 chr3L 10504309 10504335 chr3L 10504438 10504464 13 129 15.5 11.0 13.2 0.9 155 chr3L 10504309 intron A2bp1 + chr3L 10504386 intron A2bp1 + chr3L 10504464 intron A2bp1 + chr3L_13_10500001 chr3L_10500001 RAL-382 1971 chr3L 10504337 10504342 chr3L 10504431 10504461 6 114 13.5 11.0 12.2 0.5 124 chr3L 10504337 intron A2bp1 + chr3L 10504399 intron A2bp1 + chr3L 10504461 intron A2bp1 + chr3L_6_10500001 chr3L_10500001 RAL-382 1972 chr3L 10509441 10509465 chr3L 10509620 10509644 7 179 14.5 0.5 7.5 0.8 203 chr3L 10509441 intron A2bp1 + chr3L 10509542 intron A2bp1 + chr3L 10509644 intron A2bp1 + chr3L_7_10505001 chr3L_10505001 RAL-382 1973 chr3L 10538648 10538901 chr3L 10538777 10539036 36 130 9.5 8.5 9.0 3.6 388 chr3L 10538648 intron A2bp1 + chr3L 10538842 intron A2bp1 + chr3L 10539036 intron A2bp1 + chr3L_36_10535001 chr3L_10535001 RAL-382 1974 chr3L 10571212 10571228 chr3L 10571344 10571360 6 132 12.5 8.5 10.5 0.5 148 chr3L 10571212 exon A2bp1 + chr3L 10571286 intron A2bp1 + chr3L 10571360 intron A2bp1 + chr3L_6_10570001 chr3L_10570001 RAL-382 1975 chr3L 10584230 10584299 chr3L 10584367 10584436 29 137 9.0 6.0 7.5 3.4 206 chr3L 10584230 intron A2bp1 + chr3L 10584333 intron A2bp1 + chr3L 10584436 intron A2bp1 + chr3L_29_10580001 chr3L_10580001 RAL-382 1976 chr3L 10600405 10600477 chr3L 10600537 10600609 25 131 5.5 5.5 5.5 3.8 204 chr3L 10600405 intergenic not near genes chr3L 10600507 intergenic not near genes chr3L 10600609 intergenic not near genes chr3L_25_10600001 chr3L_10600001 RAL-382 1977 chr3L 10601157 10601222 chr3L 10601300 10601349 18 137 4.0 6.5 5.2 2.9 192 chr3L 10601157 intergenic not near genes chr3L 10601253 intergenic not near genes chr3L 10601349 intergenic not near genes chr3L_18_10600001 chr3L_10600001 RAL-382 1978 chr3L 10610175 10610243 chr3L 10610302 10610354 26 126 8.5 8.5 8.5 2.7 179 chr3L 10610175 intergenic not near genes chr3L 10610264 intergenic not near genes chr3L 10610354 intergenic not near genes chr3L_26_10610001 chr3L_10610001 RAL-382 1979 chr3L 10611264 10611337 chr3L 10611385 10611463 9 115 6.5 8.5 7.5 1.1 199 chr3L 10611264 intergenic not near genes chr3L 10611364 intergenic not near genes chr3L 10611463 intergenic not near genes chr3L_9_10610001 chr3L_10610001 RAL-382 1980 chr3L 10614746 10614796 chr3L 10614873 10614925 7 130 0.0 16.0 8.0 0.8 179 chr3L 10614746 intergenic not near genes chr3L 10614836 intergenic not near genes chr3L 10614925 intergenic not near genes chr3L_7_10610001 chr3L_10610001 RAL-382 1981 chr3L 10621800 10621878 chr3L 10621937 10622015 34 136 9.5 6.0 7.8 3.9 215 chr3L 10621800 intergenic not near genes chr3L 10621908 intergenic not near genes chr3L 10622015 intergenic not near genes chr3L_34_10620001 chr3L_10620001 RAL-382 1982 chr3L 10658056 10658210 chr3L 10658183 10658387 40 156 0.0 0.0 0.0 40.0 331 chr3L 10658056 intron CG32066 - chr3L 10658222 intron CG32066 - chr3L 10658387 intron CG32066 - chr3L_40_10655001 chr3L_10655001 RAL-382 1983 chr3L 10678681 10678713 chr3L 10678810 10678842 19 129 0.0 14.0 7.0 2.4 161 chr3L 10678681 intron simj + chr3L 10678762 intron simj + chr3L 10678842 intron simj + chr3L_19_10675001 chr3L_10675001 RAL-382 1984 chr3L 10706549 10706564 chr3L 10706731 10706746 11 182 0.0 9.0 4.5 2.0 197 chr3L 10706549 intergenic not near genes chr3L 10706648 intergenic not near genes chr3L 10706746 intergenic not near genes chr3L_11_10705001 chr3L_10705001 RAL-382 1985 chr3L 10714649 10714724 chr3L 10714779 10714850 10 133 0.0 0.0 0.0 10.0 201 chr3L 10714649 intergenic not near genes chr3L 10714750 intergenic not near genes chr3L 10714850 intergenic not near genes chr3L_10_10710001 chr3L_10710001 RAL-382 1986 chr3L 10717512 10717536 chr3L 10717841 10717865 15 328 10.0 23.5 16.8 0.8 353 chr3L 10717512 intergenic not near genes chr3L 10717688 intergenic not near genes chr3L 10717865 intergenic not near genes chr3L_15_10715001 chr3L_10715001 RAL-382 1987 chr3L 10735771 10735773 chr3L 24766920 24766922 5 14031149 23.5 24.5 24.0 0.2 14031151 chr3L 10735771 intergenic not near genes chr3L 17751346 intergenic Adgf-A - chr3L 24766922 intron scro + chr3L_5_17750001 chr3L_17750001 RAL-382 1988 chr3L 10735781 10735830 chr3L 10735920 10735969 16 139 9.5 11.5 10.5 1.4 188 chr3L 10735781 intergenic not near genes chr3L 10735875 intergenic not near genes chr3L 10735969 intergenic not near genes chr3L_16_10735001 chr3L_10735001 RAL-382 1989 chr3L 10745492 10745558 chr3L 10745622 10745688 35 130 10.0 9.5 9.8 3.2 196 chr3L 10745492 intergenic not near genes chr3L 10745590 intergenic not near genes chr3L 10745688 intergenic not near genes chr3L_35_10745001 chr3L_10745001 RAL-382 1990 chr3L 10761672 10761724 chr3L 10761803 10761855 8 131 8.5 2.0 5.2 1.3 183 chr3L 10761672 intergenic not near genes chr3L 10761764 intergenic not near genes chr3L 10761855 intergenic not near genes chr3L_8_10760001 chr3L_10760001 RAL-382 1991 chr3L 10762803 10762837 chr3L 10762919 10762971 12 127 13.0 8.0 10.5 1.0 168 chr3L 10762803 intergenic not near genes chr3L 10762887 intergenic not near genes chr3L 10762971 intergenic not near genes chr3L_12_10760001 chr3L_10760001 RAL-382 1992 chr3L 10762838 10762854 chr3L 10762917 10762988 8 120 8.5 8.0 8.2 0.9 150 chr3L 10762838 intergenic not near genes chr3L 10762913 intergenic not near genes chr3L 10762988 intergenic not near genes chr3L_8_10760001 chr3L_10760001 RAL-382 1993 chr3L 10820384 10820523 chr3L 10820525 10820722 10 216 0.0 0.0 0.0 10.0 338 chr3L 10820384 intergenic not near genes chr3L 10820553 intergenic not near genes chr3L 10820722 intergenic not near genes chr3L_10_10820001 chr3L_10820001 RAL-382 1994 chr3L 10847721 10847793 chr3L 10847866 10847938 39 145 9.5 9.0 9.2 3.8 217 chr3L 10847721 intergenic not near genes chr3L 10847830 intergenic not near genes chr3L 10847938 intergenic not near genes chr3L_39_10845001 chr3L_10845001 RAL-382 1995 chr3L 10907963 10907992 chr3L 10908089 10908118 4 126 4.5 0.5 2.5 1.1 155 chr3L 10907963 intergenic not near genes chr3L 10908040 intergenic not near genes chr3L 10908118 intergenic not near genes chr3L_4_10905001 chr3L_10905001 RAL-382 1996 chr3L 10912469 10912527 chr3L 10912602 10912645 6 130 2.5 0.0 1.2 2.7 176 chr3L 10912469 intergenic not near genes chr3L 10912557 intergenic not near genes chr3L 10912645 intergenic not near genes chr3L_6_10910001 chr3L_10910001 RAL-382 1997 chr3L 10928163 10928173 chr3L 10928444 10928454 5 281 0.0 11.5 5.8 0.7 291 chr3L 10928163 intergenic not near genes chr3L 10928308 intergenic not near genes chr3L 10928454 intergenic not near genes chr3L_5_10925001 chr3L_10925001 RAL-382 1998 chr3L 10941381 10941399 chr3L 10941516 10941534 13 135 11.5 0.0 5.8 1.9 153 chr3L 10941381 intergenic not near genes chr3L 10941458 intergenic not near genes chr3L 10941534 intergenic not near genes chr3L_13_10940001 chr3L_10940001 RAL-382 1999 chr3L 10956401 10956469 chr3L 10956569 10956637 26 165 6.5 3.0 4.8 4.5 236 chr3L 10956401 intergenic not near genes chr3L 10956519 intergenic not near genes chr3L 10956637 intergenic not near genes chr3L_26_10955001 chr3L_10955001 RAL-382 2000 chr3L 10958159 10958234 chr3L 10958291 10958321 22 126 7.5 0.0 3.8 4.6 162 chr3L 10958159 intergenic not near genes chr3L 10958240 intergenic not near genes chr3L 10958321 intergenic not near genes chr3L_22_10955001 chr3L_10955001 RAL-382 2001 chr3L 11053614 11053646 chr3L 11053749 11053786 18 140 6.0 8.5 7.2 2.2 172 chr3L 11053614 intergenic CG7888 + chr3L 11053700 intergenic CG7888 + chr3L 11053786 intergenic CG7888 + chr3L_18_11050001 chr3L_11050001 RAL-382 2002 chr3L 11083465 11083526 chr3L 11083613 11083674 32 148 10.0 11.0 10.5 2.8 209 chr3L 11083465 exon JIL-1 - chr3L 11083570 intron JIL-1 - chr3L 11083674 intron JIL-1 - chr3L_32_11080001 chr3L_11080001 RAL-382 2003 chr3L 11085636 11085704 chr3L 11085769 11085833 37 133 9.0 16.0 12.5 2.7 197 chr3L 11085636 intron JIL-1 - chr3L 11085734 intron JIL-1 - chr3L 11085833 intron JIL-1 - chr3L_37_11085001 chr3L_11085001 RAL-382 2004 chr3L 11086990 11087084 chr3L 11088846 11088912 S-element 18 1845 0.0 5.0 2.5 5.1 1922 chr3L 11086990 intron JIL-1 - chr3L 11087951 intron JIL-1 - chr3L 11088912 intron JIL-1 - chr3L_18_11085001 chr3L_11085001 RAL-382 2005 chr3L 11090013 11090091 chr3L 11090151 11090229 15 138 9.5 5.0 7.2 1.8 216 chr3L 11090013 intron JIL-1 - chr3L 11090121 intron JIL-1 - chr3L 11090229 intron JIL-1 - chr3L_15_11090001 chr3L_11090001 RAL-382 2006 chr3L 11105040 11105055 chr3L 11105172 11105187 12 132 8.0 14.5 11.2 1.0 147 chr3L 11105040 intergenic not near genes chr3L 11105114 intergenic not near genes chr3L 11105187 intergenic not near genes chr3L_12_11105001 chr3L_11105001 RAL-382 2007 chr3L 11105256 11105318 chr3L 11107017 11107078 X-element 19 1760 15.0 8.0 11.5 1.5 1822 chr3L 11105256 intergenic not near genes chr3L 11106167 intergenic not near genes chr3L 11107078 exon CG32073 - chr3L_19_11105001 chr3L_11105001 RAL-382 2008 chr3L 11135478 11135529 chr3L 11135758 11135768 23 278 4.5 0.0 2.2 7.2 290 chr3L 11135478 3` UTR CG14143 + chr3L 11135623 intergenic CG14143 +,CG32082 + chr3L 11135768 intergenic CG32082 +,CG14143 + chr3L_23_11135001 chr3L_11135001 RAL-382 2009 chr3L 11135768 11135794 chr3L 11135903 11135929 10 133 0.0 10.5 5.2 1.6 161 chr3L 11135768 intergenic CG32082 +,CG14143 + chr3L 11135848 intergenic CG32082 +,CG14143 + chr3L 11135929 intergenic CG32082 +,CG14143 + chr3L_10_11135001 chr3L_11135001 RAL-382 2010 chr3L 11145537 11145555 chr3L 11145672 11145695 5 139 0.0 11.5 5.8 0.7 158 chr3L 11145537 intron CG32082 + chr3L 11145616 intron CG32082 + chr3L 11145695 intron CG32082 + chr3L_5_11145001 chr3L_11145001 RAL-382 2011 chr3L 11187705 11187737 chr3L 11187836 11187868 17 131 0.0 23.0 11.5 1.4 163 chr3L 11187705 intron GlcAT-P - chr3L 11187786 intron GlcAT-P - chr3L 11187868 intron GlcAT-P - chr3L_17_11185001 chr3L_11185001 RAL-382 2012 chr3L 11200918 11200941 chr3L 11201044 11201067 4 126 0.0 9.5 4.8 0.7 149 chr3L 11200918 intron Plod - chr3L 11200992 intron Plod - chr3L 11201067 intron Plod - chr3L_4_11200001 chr3L_11200001 RAL-382 2013 chr3L 11217463 11217532 chr3L 11217596 11217664 29 133 11.5 6.0 8.8 3.0 201 chr3L 11217463 intron CG42671 + chr3L 11217564 intron CG42671 + chr3L 11217664 intron CG42671 + chr3L_29_11215001 chr3L_11215001 RAL-382 2014 chr3L 11220545 11220615 chr3L 11220971 11221041 21 425 10.5 2.0 6.2 2.9 496 chr3L 11220545 intron CG42671 + chr3L 11220793 intron CG42671 + chr3L 11221041 intron CG42671 + chr3L_21_11220001 chr3L_11220001 RAL-382 2015 chr3L 11264430 11264489 chr3L 11271417 11271486 17.6 23 6999 7.5 7.0 7.2 2.8 7056 chr3L 11264430 intergenic not near genes chr3L 11267958 intergenic not near genes chr3L 11271486 intergenic not near genes chr3L_23_11265001 chr3L_11265001 RAL-382 2016 chr3L 11290575 11290648 chr3L 11290948 11291021 32 372 10.5 8.5 9.5 3.0 446 chr3L 11290575 intron CG6175 - chr3L 11290798 intron CG6175 - chr3L 11291021 intron CG6175 - chr3L_32_11290001 chr3L_11290001 RAL-382 2017 chr3L 11302997 11303047 chr3L 11303133 11303183 7 136 8.0 0.0 4.0 1.4 186 chr3L 11302997 intergenic not near genes chr3L 11303090 intergenic not near genes chr3L 11303183 intergenic not near genes chr3L_7_11300001 chr3L_11300001 RAL-382 2018 chr3L 11329655 11329664 chr3L 11332910 11332919 jockey 4 3255 9.5 8.0 8.8 0.4 3264 chr3L 11329655 intergenic not near genes chr3L 11331287 intergenic not near genes chr3L 11332919 intergenic not near genes chr3L_4_11330001 chr3L_11330001 RAL-382 2019 chr3L 11329669 11329721 chr3L 11332903 11332924 jockey 16 3246 8.0 7.0 7.5 1.9 3255 chr3L 11329669 intergenic not near genes chr3L 11331296 intergenic not near genes chr3L 11332924 intergenic not near genes chr3L_16_11330001 chr3L_11330001 RAL-382 2020 chr3L 11386050 11386059 chr3L 11386177 11386186 4 127 15.0 7.5 11.2 0.3 136 chr3L 11386050 intergenic not near genes chr3L 11386118 intergenic not near genes chr3L 11386186 intergenic not near genes chr3L_4_11385001 chr3L_11385001 RAL-382 2021 chr3L 11386062 11386086 chr3L 11386174 11386213 7 121 8.5 7.0 7.8 0.8 151 chr3L 11386062 intergenic not near genes chr3L 11386138 intergenic not near genes chr3L 11386213 intergenic not near genes chr3L_7_11385001 chr3L_11385001 RAL-382 2022 chr3L 11402237 11402244 chr3L 11402333 11402376 7 115 3.0 10.5 6.8 0.9 139 chr3L 11402237 intergenic not near genes chr3L 11402306 intergenic not near genes chr3L 11402376 intergenic not near genes chr3L_7_11400001 chr3L_11400001 RAL-382 2023 chr3L 11404773 11404854 chr3L 11404938 11405019 25 165 7.0 3.5 5.2 4.0 246 chr3L 11404773 intergenic not near genes chr3L 11404896 intergenic not near genes chr3L 11405019 intergenic not near genes chr3L_25_11400001 chr3L_11400001 RAL-382 2024 chr3L 11471539 11471607 chr3L 11471667 11471735 20 127 8.0 4.5 6.2 2.8 196 chr3L 11471539 intergenic not near genes chr3L 11471637 intergenic not near genes chr3L 11471735 intergenic not near genes chr3L_20_11470001 chr3L_11470001 RAL-382 2025 chr3L 11550282 11550303 chr3L 11550404 11550430 15 131 0.0 11.0 5.5 2.3 148 chr3L 11550282 intron Mob2 - chr3L 11550356 intron Mob2 - chr3L 11550430 intron Mob2 - chr3L_15_11550001 chr3L_11550001 RAL-382 2026 chr3L 11550304 11550323 chr3L 11550393 11550455 13 128 0.0 10.0 5.0 2.2 151 chr3L 11550304 intron Mob2 - chr3L 11550380 intron Mob2 - chr3L 11550455 intron Mob2 - chr3L_13_11550001 chr3L_11550001 RAL-382 2027 chr3L 11553682 11553730 chr3L 11553829 11553882 20 152 7.5 8.5 8.0 2.2 200 chr3L 11553682 intron Mob2 - chr3L 11553782 intron Mob2 - chr3L 11553882 intron Mob2 - chr3L_20_11550001 chr3L_11550001 RAL-382 2028 chr3L 11556634 11556677 chr3L 11556761 11556804 15 127 15.0 0.0 7.5 1.8 170 chr3L 11556634 intron Mob2 - chr3L 11556719 intron Mob2 - chr3L 11556804 intron Mob2 - chr3L_15_11555001 chr3L_11555001 RAL-382 2029 chr3L 11576091 11576106 chr3L 11576242 11576257 8 151 0.0 13.0 6.5 1.1 166 chr3L 11576091 intron CG33489 - chr3L 11576174 intron CG33489 - chr3L 11576257 intron CG33489 - chr3L_8_11575001 chr3L_11575001 RAL-382 2030 chr3L 11579517 11579585 chr3L 11579680 11579749 27 163 8.5 5.5 7.0 3.4 232 chr3L 11579517 intergenic CG43390 - chr3L 11579633 intergenic CG43390 - chr3L 11579749 3` UTR CG43390 - chr3L_27_11575001 chr3L_11575001 RAL-382 2031 chr3L 11580612 11580650 chr3L 11580750 11580788 11 138 42.5 49.0 45.8 0.2 176 chr3L 11580612 intergenic CG43391 - chr3L 11580700 intergenic CG43391 - chr3L 11580788 intergenic CG43391 - chr3L_11_11580001 chr3L_11580001 RAL-382 2032 chr3L 11600773 11600844 chr3L 11600938 11601011 22 166 5.5 0.0 2.8 5.8 238 chr3L 11600773 intron CG7368 + chr3L 11600892 intron CG7368 + chr3L 11601011 intron CG7368 + chr3L_22_11600001 chr3L_11600001 RAL-382 2033 chr3L 11648464 11648508 chr3L 11648597 11648641 8 132 14.0 0.0 7.0 1.0 177 chr3L 11648464 5` UTR RIOK1 - chr3L 11648552 intergenic RIOK1 -,CG7339 + chr3L 11648641 intergenic CG7339 +,RIOK1 - chr3L_8_11645001 chr3L_11645001 RAL-382 2034 chr3L 11663704 11663754 chr3L 11663879 11663923 15 174 4.5 0.0 2.2 4.7 219 chr3L 11663704 intron CG32085 - chr3L 11663814 intron CG32085 - chr3L 11663923 intron CG32085 - chr3L_15_11660001 chr3L_11660001 RAL-382 2035 chr3L 11702384 11702385 chr3L 21448027 21448027 4 9745643 21.0 37.0 29.0 0.1 9745643 chr3L 11702384 intron CG11658 - chr3L 16575206 exon mbf1 + chr3L 21448027 3` UTR Syx7 + chr3L_4_16575001 chr3L_16575001 RAL-382 2036 chr3L 11711696 11711727 chr3L 11711840 11711871 15 144 14.0 5.5 9.8 1.4 175 chr3L 11711696 intergenic crim - chr3L 11711784 intergenic crim -,CG14132 - chr3L 11711871 intergenic CG14132 -,crim - chr3L_15_11710001 chr3L_11710001 RAL-382 2037 chr3L 11723047 11723106 chr3L 11727892 11727951 Doc 28 4844 14.5 10.0 12.2 2.1 4904 chr3L 11723047 3` UTR Bmcp + chr3L 11725499 intron Bmcp + chr3L 11727951 3` UTR Bmcp + chr3L_28_11725001 chr3L_11725001 RAL-382 2038 chr3L 11743973 11743990 chr3L 11744131 11744148 6 156 16.5 1.0 8.8 0.6 175 chr3L 11743973 exon CG6024 - chr3L 11744060 intron CG6024 - chr3L 11744148 intron CG6024 - chr3L_6_11740001 chr3L_11740001 RAL-382 2039 chr3L 11743991 11744046 chr3L 11744128 11744204 21 156 6.5 1.0 3.8 4.4 213 chr3L 11743991 exon CG6024 - chr3L 11744098 intron CG6024 - chr3L 11744204 intron CG6024 - chr3L_21_11740001 chr3L_11740001 RAL-382 2040 chr3L 11750560 11750574 chr3L 11750741 11750756 4 187 12.0 4.0 8.0 0.4 196 chr3L 11750560 intron CG6024 - chr3L 11750658 intron CG6024 - chr3L 11750756 intron CG6024 - chr3L_4_11750001 chr3L_11750001 RAL-382 2041 chr3L 11755143 11755196 chr3L 11755263 11755300 17 118 12.0 10.5 11.2 1.4 157 chr3L 11755143 intron CG6024 - chr3L 11755222 intron CG6024 - chr3L 11755300 intron CG6024 - chr3L_17_11755001 chr3L_11755001 RAL-382 2042 chr3L 11757894 11757907 chr3L 11758041 11758054 4 147 14.0 0.0 7.0 0.5 160 chr3L 11757894 intron CG6024 - chr3L 11757974 intron CG6024 - chr3L 11758054 intron CG6024 - chr3L_4_11755001 chr3L_11755001 RAL-382 2043 chr3L 9313026 9313027 chr3L 11777678 11777678 4 2464651 26.0 30.0 28.0 0.1 2464652 chr3L 9313026 intergenic not near genes chr3L 10545352 intron A2bp1 + chr3L 11777678 intron,intron Pi3K68D -,CG14131 + chr3L_4_10545001 chr3L_10545001 RAL-382 2044 chr3L 11810535 11810555 chr3L 11810663 11810683 7 128 7.5 25.0 16.2 0.4 148 chr3L 11810535 intron CG42255 - chr3L 11810609 intron CG42255 - chr3L 11810683 exon CG42255 - chr3L_7_11810001 chr3L_11810001 RAL-382 2045 chr3L 11811411 11811481 chr3L 11811539 11811609 29 126 7.0 7.5 7.2 3.5 198 chr3L 11811411 intron CG42255 - chr3L 11811510 intron CG42255 - chr3L 11811609 exon CG42255 - chr3L_29_11810001 chr3L_11810001 RAL-382 2046 chr3L 11846343 11846363 chr3L 11846513 11846533 10 169 13.0 0.0 6.5 1.3 190 chr3L 11846343 intergenic not near genes chr3L 11846438 intergenic not near genes chr3L 11846533 intergenic not near genes chr3L_10_11845001 chr3L_11845001 RAL-382 2047 chr3L 11849286 11849313 chr3L 11849436 11849463 9 149 13.0 7.0 10.0 0.8 177 chr3L 11849286 intergenic not near genes chr3L 11849374 intergenic not near genes chr3L 11849463 intergenic not near genes chr3L_9_11845001 chr3L_11845001 RAL-382 2048 chr3L 11849320 11849354 chr3L 11849435 11849504 10 146 4.0 6.5 5.2 1.6 184 chr3L 11849320 intergenic not near genes chr3L 11849412 intergenic not near genes chr3L 11849504 intergenic not near genes chr3L_10_11845001 chr3L_11845001 RAL-382 2049 chr3L 11868123 11868154 chr3L 11868249 11868280 12 125 16.5 0.0 8.2 1.3 157 chr3L 11868123 intron CG44837 - chr3L 11868202 intron CG44837 - chr3L 11868280 intron CG44837 - chr3L_12_11865001 chr3L_11865001 RAL-382 2050 chr3L 11870178 11870239 chr3L 11870360 11870404 20 180 4.5 2.0 3.2 4.8 226 chr3L 11870178 intron CG44837 - chr3L 11870291 intron CG44837 - chr3L 11870404 intron CG44837 - chr3L_20_11870001 chr3L_11870001 RAL-382 2051 chr3L 11887223 11887269 chr3L 11887355 11887416 20 143 9.0 1.0 5.0 3.3 193 chr3L 11887223 intron CG44837 - chr3L 11887320 intron,3` UTR CG44837 -,CG5897 - chr3L 11887416 intron,3` UTR CG44837 -,CG5897 - chr3L_20_11885001 chr3L_11885001 RAL-382 2052 chr3L 11938849 11938900 chr3L 11938958 11939029 20 121 5.5 7.5 6.5 2.7 180 chr3L 11938849 5` UTR CG44837 - chr3L 11938939 intergenic CG44837 - chr3L 11939029 intergenic CG44837 - chr3L_20_11935001 chr3L_11935001 RAL-382 2053 chr3L 11943445 11943521 chr3L 11943596 11943672 27 151 5.5 5.5 5.5 4.2 227 chr3L 11943445 3` UTR Rpt4R + chr3L 11943558 intergenic Rpt4R +,CG5883 - chr3L 11943672 3` UTR CG5883 - chr3L_27_11940001 chr3L_11940001 RAL-382 2054 chr3L 12013867 12013930 chr3L 12014002 12014071 22 140 6.5 6.0 6.2 3.1 204 chr3L 12013867 intron rols - chr3L 12013969 intron rols - chr3L 12014071 intron rols - chr3L_22_12010001 chr3L_12010001 RAL-382 2055 chr3L 12052668 12052735 chr3L 12052807 12052874 26 138 9.5 12.0 10.8 2.2 206 chr3L 12052668 intron rols - chr3L 12052771 intron rols - chr3L 12052874 intron rols - chr3L_26_12050001 chr3L_12050001 RAL-382 2056 chr3L 12075385 12075459 chr3L 12075524 12075593 22 135 5.0 9.5 7.2 2.7 208 chr3L 12075385 intron Sema-5c - chr3L 12075489 intron Sema-5c - chr3L 12075593 intron Sema-5c - chr3L_22_12075001 chr3L_12075001 RAL-382 2057 chr3L 12089031 12089110 chr3L 12089161 12089240 33 130 7.5 8.5 8.0 3.7 209 chr3L 12089031 exon CG17154 + chr3L 12089136 3` UTR CG17154 + chr3L 12089240 intergenic CG17154 + chr3L_33_12085001 chr3L_12085001 RAL-382 2058 chr3L 12091784 12091810 chr3L 12091948 12091996 5 175 3.5 10.0 6.8 0.6 212 chr3L 12091784 intergenic not near genes chr3L 12091890 intergenic not near genes chr3L 12091996 intergenic not near genes chr3L_5_12090001 chr3L_12090001 RAL-382 2059 chr3L 12170744 12170821 chr3L 12170876 12170953 26 132 6.5 9.0 7.8 3.0 209 chr3L 12170744 intron Rh7 - chr3L 12170848 intron Rh7 - chr3L 12170953 intron Rh7 - chr3L_26_12170001 chr3L_12170001 RAL-382 2060 chr3L 12186366 12186396 chr3L 12186532 12186562 11 166 8.0 8.5 8.2 1.2 196 chr3L 12186366 intron CG6910 + chr3L 12186464 intron CG6910 + chr3L 12186562 exon CG6910 + chr3L_11_12185001 chr3L_12185001 RAL-382 2061 chr3L 12287967 12287999 chr3L 12288106 12288128 7 138 12.0 2.5 7.2 0.9 161 chr3L 12287967 intergenic not near genes chr3L 12288048 intergenic not near genes chr3L 12288128 intergenic not near genes chr3L_7_12285001 chr3L_12285001 RAL-382 2062 chr3L 12288000 12288044 chr3L 12288103 12288132 10 122 4.0 2.0 3.0 2.5 132 chr3L 12288000 intergenic not near genes chr3L 12288066 intergenic not near genes chr3L 12288132 intergenic not near genes chr3L_10_12285001 chr3L_12285001 RAL-382 2063 chr3L 12300802 12300878 chr3L 12300991 12301046 31 187 11.0 9.0 10.0 2.8 244 chr3L 12300802 intergenic CR44550 + chr3L 12300924 intergenic CR44550 + chr3L 12301046 5` UTR CR44550 + chr3L_31_12300001 chr3L_12300001 RAL-382 2064 chr3L 12304054 12304110 chr3L 12304172 12304236 15 123 4.5 11.0 7.8 1.7 182 chr3L 12304054 intergenic not near genes chr3L 12304145 intergenic not near genes chr3L 12304236 intergenic not near genes chr3L_15_12300001 chr3L_12300001 RAL-382 2065 chr3L 12312484 12312501 chr3L 12312602 12312629 7 126 6.5 16.5 11.5 0.6 145 chr3L 12312484 intergenic not near genes chr3L 12312556 intergenic not near genes chr3L 12312629 intergenic not near genes chr3L_7_12310001 chr3L_12310001 RAL-382 2066 chr3L 12318610 12318629 chr3L 12318748 12318752 4 134 8.5 8.5 8.5 0.4 142 chr3L 12318610 intergenic not near genes chr3L 12318681 intergenic not near genes chr3L 12318752 intergenic not near genes chr3L_4_12315001 chr3L_12315001 RAL-382 2067 chr3L 12369480 12369554 chr3L 12369704 12369779 5 224 7.5 0.0 3.8 1.0 299 chr3L 12369480 intron Ncc69 - chr3L 12369630 intron Ncc69 - chr3L 12369779 intron Ncc69 - chr3L_5_12365001 chr3L_12365001 RAL-382 2068 chr3L 12378465 12378535 chr3L 12378591 12378661 27 124 6.5 9.5 8.0 3.0 196 chr3L 12378465 intron Ncc69 - chr3L 12378563 intron Ncc69 - chr3L 12378661 intron Ncc69 - chr3L_27_12375001 chr3L_12375001 RAL-382 2069 chr3L 12381490 12381553 chr3L 12381618 12381681 9 128 4.5 6.0 5.2 1.5 191 chr3L 12381490 intron Ncc69 - chr3L 12381586 intron Ncc69 - chr3L 12381681 intron Ncc69 - chr3L_9_12380001 chr3L_12380001 RAL-382 2070 chr3L 12388436 12388477 chr3L 12388576 12388617 14 139 7.0 6.5 6.8 1.8 181 chr3L 12388436 intron Ncc69 - chr3L 12388526 intron Ncc69 - chr3L 12388617 intron Ncc69 - chr3L_14_12385001 chr3L_12385001 RAL-382 2071 chr3L 12392407 12392479 chr3L 12392573 12392631 26 166 5.0 6.5 5.8 3.8 224 chr3L 12392407 intergenic not near genes chr3L 12392519 intergenic not near genes chr3L 12392631 intergenic not near genes chr3L_26_12390001 chr3L_12390001 RAL-382 2072 chr3L 12413000 12413015 chr3L 12413128 12413143 7 128 9.5 8.5 9.0 0.7 143 chr3L 12413000 intron CG32103 - chr3L 12413072 intron CG32103 - chr3L 12413143 intron CG32103 - chr3L_7_12410001 chr3L_12410001 RAL-382 2073 chr3L 12413017 12413065 chr3L 12413119 12413185 18 125 9.0 11.0 10.0 1.6 168 chr3L 12413017 intron CG32103 - chr3L 12413101 intron CG32103 - chr3L 12413185 intron CG32103 - chr3L_18_12410001 chr3L_12410001 RAL-382 2074 chr3L 12458485 12458507 chr3L 12458632 12458656 9 149 6.0 19.0 12.5 0.7 171 chr3L 12458485 intergenic not near genes chr3L 12458570 intergenic not near genes chr3L 12458656 intergenic not near genes chr3L_9_12455001 chr3L_12455001 RAL-382 2075 chr3L 12491672 12491709 chr3L 12491792 12491842 12 132 0.0 9.0 4.5 2.2 170 chr3L 12491672 intergenic CG10657 -,CR45682 +,CR45681 + chr3L 12491757 intergenic CG10657 -,CR45682 + chr3L 12491842 3` UTR,5` UTR CG10657 -,CR45682 + chr3L_12_12490001 chr3L_12490001 RAL-382 2076 chr3L 12541851 12541911 chr3L 12541978 12542002 15 119 7.0 7.5 7.2 1.8 151 chr3L 12541851 intron,5` UTR sowah -,CR43612 + chr3L 12541926 intron,5` UTR sowah -,CR43612 + chr3L 12542002 intron,5` UTR sowah -,CR43612 + chr3L_15_12540001 chr3L_12540001 RAL-382 2077 chr3L 12578004 12578018 chr3L 12578142 12578155 6 138 8.0 0.0 4.0 1.2 151 chr3L 12578004 intergenic not near genes chr3L 12578080 intergenic not near genes chr3L 12578155 intergenic not near genes chr3L_6_12575001 chr3L_12575001 RAL-382 2078 chr3L 12578021 12578057 chr3L 12578139 12578195 6 135 4.0 0.0 2.0 2.0 174 chr3L 12578021 intergenic not near genes chr3L 12578108 intergenic not near genes chr3L 12578195 intergenic not near genes chr3L_6_12575001 chr3L_12575001 RAL-382 2079 chr3L 12610952 12611022 chr3L 12611248 12611305 28 296 0.0 11.0 5.5 4.3 353 chr3L 12610952 intron caup + chr3L 12611128 intron caup + chr3L 12611305 intron caup + chr3L_28_12610001 chr3L_12610001 RAL-382 2080 chr3L 12626120 12626159 chr3L 12626279 12626318 25 159 9.5 0.0 4.8 4.3 198 chr3L 12626120 intergenic not near genes chr3L 12626219 intergenic not near genes chr3L 12626318 intergenic not near genes chr3L_25_12625001 chr3L_12625001 RAL-382 2081 chr3L 12647898 12647966 chr3L 12648024 12648092 19 122 5.5 0.0 2.8 5.0 194 chr3L 12647898 5` UTR CR32111 + chr3L 12647995 5` UTR CR32111 + chr3L 12648092 5` UTR CR32111 + chr3L_19_12645001 chr3L_12645001 RAL-382 2082 chr3L 12705371 12705451 chr3L 12705521 12705526 10 122 1.5 15.5 8.5 1.1 155 chr3L 12705371 intron mirr + chr3L 12705448 intron mirr + chr3L 12705526 intron mirr + chr3L_10_12705001 chr3L_12705001 RAL-382 2083 chr3L 12706607 12706654 chr3L 12706769 12706831 21 176 6.5 6.0 6.2 2.9 224 chr3L 12706607 intron mirr + chr3L 12706719 intron mirr + chr3L 12706831 intron mirr + chr3L_21_12705001 chr3L_12705001 RAL-382 2084 chr3L 12727987 12728018 chr3L 12728121 12728152 14 134 19.0 13.0 16.0 0.8 165 chr3L 12727987 intergenic not near genes chr3L 12728070 intergenic not near genes chr3L 12728152 intergenic not near genes chr3L_14_12725001 chr3L_12725001 RAL-382 2085 chr3L 12743254 12743307 chr3L 12743361 12743416 5 119 0.0 7.0 3.5 1.1 162 chr3L 12743254 intron CG32112 + chr3L 12743335 intron CG32112 + chr3L 12743416 intron CG32112 + chr3L_5_12740001 chr3L_12740001 RAL-382 2086 chr3L 12801929 12802007 chr3L 12802055 12802133 38 122 5.0 8.5 6.8 4.9 204 chr3L 12801929 intron Atg1 - chr3L 12802031 intron Atg1 - chr3L 12802133 intron Atg1 - chr3L_38_12800001 chr3L_12800001 RAL-382 2087 chr3L 12830403 12830461 chr3L 12830539 12830599 16 138 13.0 4.5 8.8 1.6 196 chr3L 12830403 intron CG10960 - chr3L 12830501 intron CG10960 - chr3L 12830599 intron CG10960 - chr3L_16_12830001 chr3L_12830001 RAL-382 2088 chr3L 12874877 12874948 chr3L 12877219 12877290 jockey 36 2340 6.5 6.0 6.2 5.0 2413 chr3L 12874877 intergenic not near genes chr3L 12876084 intergenic not near genes chr3L 12877290 intergenic not near genes chr3L_36_12875001 chr3L_12875001 RAL-382 2089 chr3L 12894763 12894805 chr3L 12894891 12894932 16 125 19.5 11.5 15.5 1.0 169 chr3L 12894763 intergenic CG14118 + chr3L 12894848 intergenic CG14118 + chr3L 12894932 intergenic CG14118 + chr3L_16_12890001 chr3L_12890001 RAL-382 2090 chr3L 12919232 12919237 chr3L 12924766 12924771 Rt1c 6 5534 29.0 5.0 17.0 0.3 5539 chr3L 12919232 intergenic not near genes chr3L 12922002 intergenic not near genes chr3L 12924771 intergenic not near genes chr3L_6_12920001 chr3L_12920001 RAL-382 2091 chr3L 12919242 12919303 chr3L 12924765 12924837 Rt1c 11 5522 10.0 5.0 7.5 1.3 5595 chr3L 12919242 intergenic not near genes chr3L 12922040 intergenic not near genes chr3L 12924837 intergenic not near genes chr3L_11_12920001 chr3L_12920001 RAL-382 2092 chr3L 12957742 12957812 chr3L 12962274 12962329 copia 26 4527 12.5 7.5 10.0 2.4 4587 chr3L 12957742 intergenic not near genes chr3L 12960036 intergenic not near genes chr3L 12962329 intergenic not near genes chr3L_26_12960001 chr3L_12960001 RAL-382 2093 chr3L 12976809 12976845 chr3L 12977179 12977214 13 367 13.0 6.5 9.8 1.2 405 chr3L 12976809 intergenic not near genes chr3L 12977012 intergenic not near genes chr3L 12977214 intergenic not near genes chr3L_13_12975001 chr3L_12975001 RAL-382 2094 chr3L 12978716 12978781 chr3L 12978842 12978910 16 128 9.5 0.0 4.8 2.8 194 chr3L 12978716 intergenic not near genes chr3L 12978813 intergenic not near genes chr3L 12978910 intergenic not near genes chr3L_16_12975001 chr3L_12975001 RAL-382 2095 chr3L 12980476 12980528 chr3L 12980614 12980620 11 133 5.0 0.0 2.5 3.1 144 chr3L 12980476 intergenic not near genes chr3L 12980548 intergenic not near genes chr3L 12980620 intergenic not near genes chr3L_11_12980001 chr3L_12980001 RAL-382 2096 chr3L 13004315 13004392 chr3L 13004472 13004540 39 155 7.0 4.5 5.8 5.7 225 chr3L 13004315 intergenic not near genes chr3L 13004428 intergenic not near genes chr3L 13004540 intergenic not near genes chr3L_39_13000001 chr3L_13000001 RAL-382 2097 chr3L 13008689 13008763 chr3L 13008841 13008904 18 141 6.0 0.5 3.2 4.3 215 chr3L 13008689 exon CG14117 + chr3L 13008796 exon CG14117 + chr3L 13008904 intron CG14117 + chr3L_18_13005001 chr3L_13005001 RAL-382 2098 chr3L 13055789 13055853 chr3L 13055934 13055936 9 139 4.0 2.5 3.2 2.1 147 chr3L 13055789 intergenic not near genes chr3L 13055862 intergenic not near genes chr3L 13055936 intergenic not near genes chr3L_9_13055001 chr3L_13055001 RAL-382 2099 chr3L 13073993 13074066 chr3L 13074176 13074249 36 182 9.0 8.5 8.8 3.7 256 chr3L 13073993 intergenic not near genes chr3L 13074121 intergenic not near genes chr3L 13074249 intergenic not near genes chr3L_36_13070001 chr3L_13070001 RAL-382 2100 chr3L 13085003 13085067 chr3L 13085132 13085196 15 129 8.5 2.0 5.2 2.4 193 chr3L 13085003 intergenic not near genes chr3L 13085100 intergenic not near genes chr3L 13085196 intergenic not near genes chr3L_15_13085001 chr3L_13085001 RAL-382 2101 chr3L 13112450 13112519 chr3L 13112577 13112646 25 125 7.5 8.0 7.8 2.8 196 chr3L 13112450 intergenic not near genes chr3L 13112548 intergenic not near genes chr3L 13112646 intergenic not near genes chr3L_25_13110001 chr3L_13110001 RAL-382 2102 chr3L 13123591 13123639 chr3L 13123717 13123765 6 122 13.0 10.5 11.8 0.5 174 chr3L 13123591 intergenic not near genes chr3L 13123678 intergenic not near genes chr3L 13123765 intergenic not near genes chr3L_6_13120001 chr3L_13120001 RAL-382 2103 chr3L 13159241 13159289 chr3L 13159370 13159418 8 129 8.0 3.0 5.5 1.2 177 chr3L 13159241 intergenic not near genes chr3L 13159330 intergenic not near genes chr3L 13159418 intergenic not near genes chr3L_8_13155001 chr3L_13155001 RAL-382 2104 chr3L 13161721 13161792 chr3L 13161847 13161918 39 124 10.0 10.0 10.0 3.5 197 chr3L 13161721 intergenic not near genes chr3L 13161820 intergenic not near genes chr3L 13161918 intergenic not near genes chr3L_39_13160001 chr3L_13160001 RAL-382 2105 chr3L 13174213 13174272 chr3L 13174355 13174414 24 141 9.5 9.0 9.2 2.4 201 chr3L 13174213 intergenic snky + chr3L 13174314 intergenic snky + chr3L 13174414 intergenic snky + chr3L_24_13170001 chr3L_13170001 RAL-382 2106 chr3L 13182398 13182471 chr3L 13182526 13182599 17 127 6.0 4.5 5.2 2.7 201 chr3L 13182398 intergenic not near genes chr3L 13182498 intergenic not near genes chr3L 13182599 intergenic not near genes chr3L_17_13180001 chr3L_13180001 RAL-382 2107 chr3L 13204756 13204828 chr3L 13204908 13204980 25 146 2.5 7.5 5.0 4.2 224 chr3L 13204756 intergenic not near genes chr3L 13204868 intergenic not near genes chr3L 13204980 intergenic not near genes chr3L_25_13200001 chr3L_13200001 RAL-382 2108 chr3L 13208311 13208370 chr3L 13208440 13208499 7 129 6.5 6.5 6.5 0.9 188 chr3L 13208311 intergenic CR45096 - chr3L 13208405 intergenic CR45096 - chr3L 13208499 intergenic CR45096 - chr3L_7_13205001 chr3L_13205001 RAL-382 2109 chr3L 13267242 13267252 chr3L 13267405 13267410 6 162 20.0 8.0 14.0 0.4 168 chr3L 13267242 intron caps + chr3L 13267326 intron caps + chr3L 13267410 intron caps + chr3L_6_13265001 chr3L_13265001 RAL-382 2110 chr3L 13267258 13267309 chr3L 13267403 13267433 17 150 6.5 7.0 6.8 2.2 175 chr3L 13267258 intron caps + chr3L 13267346 intron caps + chr3L 13267433 intron caps + chr3L_17_13265001 chr3L_13265001 RAL-382 2111 chr3L 13315807 13315845 chr3L 13315944 13315977 15 137 11.0 0.5 5.8 2.2 170 chr3L 13315807 intergenic not near genes chr3L 13315892 intergenic not near genes chr3L 13315977 intergenic not near genes chr3L_15_13315001 chr3L_13315001 RAL-382 2112 chr3L 13326132 13326197 chr3L 13326290 13326357 18 158 13.5 8.0 10.8 1.5 225 chr3L 13326132 intergenic not near genes chr3L 13326244 intergenic not near genes chr3L 13326357 intergenic not near genes chr3L_18_13325001 chr3L_13325001 RAL-382 2113 chr3L 13337129 13337158 chr3L 13337270 13337299 13 141 4.5 10.0 7.2 1.6 170 chr3L 13337129 intergenic not near genes chr3L 13337214 intergenic not near genes chr3L 13337299 intergenic not near genes chr3L_13_13335001 chr3L_13335001 RAL-382 2114 chr3L 13486413 13486466 chr3L 13486709 13486762 26 296 0.0 12.5 6.2 3.6 349 chr3L 13486413 intergenic Abp1 -,Tgi + chr3L 13486588 intergenic Tgi +,Abp1 - chr3L 13486762 intergenic Tgi +,Abp1 - chr3L_26_13485001 chr3L_13485001 RAL-382 2115 chr3L 13493561 13493625 chr3L 13493691 13493738 8 126 0.5 9.5 5.0 1.3 177 chr3L 13493561 intron Tgi + chr3L 13493650 intron Tgi + chr3L 13493738 intron Tgi + chr3L_8_13490001 chr3L_13490001 RAL-382 2116 chr3L 13525119 13525133 chr3L 13532965 13532979 roo 9 7845 14.0 16.0 15.0 0.6 7860 chr3L 13525119 intergenic not near genes chr3L 13529049 intergenic not near genes chr3L 13532979 intergenic not near genes chr3L_9_13525001 chr3L_13525001 RAL-382 2117 chr3L 13525134 13525179 chr3L 13532957 13533025 roo 24 7843 9.0 14.5 11.8 1.9 7891 chr3L 13525134 intergenic not near genes chr3L 13529080 intergenic not near genes chr3L 13533025 intergenic not near genes chr3L_24_13525001 chr3L_13525001 RAL-382 2118 chr3L 13676534 13676557 chr3L 13676686 13676709 13 150 23.0 7.5 15.2 0.8 175 chr3L 13676534 intron bru-3 - chr3L 13676622 intron bru-3 - chr3L 13676709 intron bru-3 - chr3L_13_13675001 chr3L_13675001 RAL-382 2119 chr3L 13725830 13725884 chr3L 13725955 13726019 23 138 5.5 8.0 6.8 2.9 189 chr3L 13725830 intron bru-3 - chr3L 13725924 intron bru-3 - chr3L 13726019 intron bru-3 - chr3L_23_13725001 chr3L_13725001 RAL-382 2120 chr3L 13800329 13800388 chr3L 13800604 13800674 17 283 4.5 7.5 6.0 2.4 345 chr3L 13800329 intron bru-3 - chr3L 13800502 intron bru-3 - chr3L 13800674 intron bru-3 - chr3L_17_13800001 chr3L_13800001 RAL-382 2121 chr3L 13804508 13804571 chr3L 13822834 13822862 roo 25 18332 11.5 10.5 11.0 2.1 18354 chr3L 13804508 intergenic not near genes chr3L 13813685 intergenic not near genes chr3L 13822862 intergenic not near genes chr3L_25_13810001 chr3L_13810001 RAL-382 2122 chr3L 13871686 13871761 chr3L 13871814 13871889 35 127 6.5 4.5 5.5 5.4 203 chr3L 13871686 3` UTR dysc - chr3L 13871788 3` UTR dysc - chr3L 13871889 3` UTR dysc - chr3L_35_13870001 chr3L_13870001 RAL-382 2123 chr3L 13911017 13911091 chr3L 13911156 13911229 17 139 10.0 7.5 8.8 1.7 212 chr3L 13911017 intron Rgl - chr3L 13911123 intron Rgl - chr3L 13911229 intron Rgl - chr3L_17_13910001 chr3L_13910001 RAL-382 2124 chr3L 13936455 13936652 chr3L 13936584 13936837 26 155 0.0 0.0 0.0 26.0 382 chr3L 13936455 intergenic not near genes chr3L 13936646 intergenic not near genes chr3L 13936837 intergenic not near genes chr3L_26_13935001 chr3L_13935001 RAL-382 2125 chr3L 13954448 13954450 chr3L 13954577 13954579 4 129 8.0 9.5 8.8 0.4 131 chr3L 13954448 intron CG32137 + chr3L 13954514 intron CG32137 + chr3L 13954579 intron CG32137 + chr3L_4_13950001 chr3L_13950001 RAL-382 2126 chr3L 13981209 13981264 chr3L 13981459 13981519 16 252 10.5 0.0 5.2 2.6 310 chr3L 13981209 intron CG17364 - chr3L 13981364 intron CG17364 - chr3L 13981519 intron CG17364 - chr3L_16_13980001 chr3L_13980001 RAL-382 2127 chr3L 13988422 13988495 chr3L 13988591 13988666 34 171 7.5 7.5 7.5 4.0 244 chr3L 13988422 intron,exon CG17364 -,CG9040 + chr3L 13988544 intron,3` UTR CG17364 -,CG9040 + chr3L 13988666 intron CG17364 - chr3L_34_13985001 chr3L_13985001 RAL-382 2128 chr3L 13993963 13994015 chr3L 13994093 13994145 15 130 10.5 4.0 7.2 1.8 182 chr3L 13993963 intergenic 26-29-p + chr3L 13994054 intergenic 26-29-p + chr3L 13994145 intergenic 26-29-p + chr3L_15_13990001 chr3L_13990001 RAL-382 2129 chr3L 14056733 14056742 chr3L 14056885 14056894 5 151 11.0 8.5 9.8 0.5 161 chr3L 14056733 intron CG32138 + chr3L 14056814 intron CG32138 + chr3L 14056894 intron CG32138 + chr3L_5_14055001 chr3L_14055001 RAL-382 2130 chr3L 14061623 14061690 chr3L 14061762 14061826 13 136 10.0 4.0 7.0 1.6 203 chr3L 14061623 intron CG32138 + chr3L 14061724 intron CG32138 + chr3L 14061826 intron CG32138 + chr3L_13_14060001 chr3L_14060001 RAL-382 2131 chr3L 14063011 14063080 chr3L 14063331 14063400 40 319 9.5 10.0 9.8 3.7 389 chr3L 14063011 intron CG32138 + chr3L 14063206 intron CG32138 + chr3L 14063400 intron CG32138 + chr3L_40_14060001 chr3L_14060001 RAL-382 2132 chr3L 14092689 14092757 chr3L 14092822 14092890 15 133 9.5 3.0 6.2 2.1 201 chr3L 14092689 intergenic not near genes chr3L 14092790 intergenic not near genes chr3L 14092890 intergenic not near genes chr3L_15_14090001 chr3L_14090001 RAL-382 2133 chr3L 14134577 14134589 chr3L 14134704 14134716 5 127 9.0 0.0 4.5 0.9 139 chr3L 14134577 intergenic not near genes chr3L 14134646 intergenic not near genes chr3L 14134716 intergenic not near genes chr3L_5_14130001 chr3L_14130001 RAL-382 2134 chr3L 14141360 14141413 chr3L 14141499 14141546 10 137 6.5 0.0 3.2 2.4 186 chr3L 14141360 intergenic not near genes chr3L 14141453 intergenic not near genes chr3L 14141546 intergenic not near genes chr3L_10_14140001 chr3L_14140001 RAL-382 2135 chr3L 14144088 14144151 chr3L 14144216 14144279 36 127 7.5 1.0 4.2 6.9 191 chr3L 14144088 intergenic not near genes chr3L 14144184 intergenic not near genes chr3L 14144279 intergenic not near genes chr3L_36_14140001 chr3L_14140001 RAL-382 2136 chr3L 14168297 14168314 chr3L 14168428 14168445 5 131 5.0 0.0 2.5 1.4 148 chr3L 14168297 intergenic not near genes chr3L 14168371 intergenic not near genes chr3L 14168445 intergenic not near genes chr3L_5_14165001 chr3L_14165001 RAL-382 2137 chr3L 14174067 14174090 chr3L 14174193 14174216 13 126 19.0 11.0 15.0 0.8 149 chr3L 14174067 intergenic not near genes chr3L 14174142 intergenic not near genes chr3L 14174216 intergenic not near genes chr3L_13_14170001 chr3L_14170001 RAL-382 2138 chr3L 14175304 14175380 chr3L 14175502 14175578 18 196 4.0 7.0 5.5 2.8 274 chr3L 14175304 intergenic D - chr3L 14175441 intergenic D - chr3L 14175578 intergenic D - chr3L_18_14175001 chr3L_14175001 RAL-382 2139 chr3L 14185113 14185186 chr3L 14185239 14185312 28 123 12.0 10.5 11.2 2.3 199 chr3L 14185113 intergenic not near genes chr3L 14185212 intergenic not near genes chr3L 14185312 intergenic not near genes chr3L_28_14185001 chr3L_14185001 RAL-382 2140 chr3L 14194676 14194737 chr3L 14194802 14194863 24 126 12.5 1.0 6.8 3.1 187 chr3L 14194676 intron nuf + chr3L 14194770 intron nuf + chr3L 14194863 intron nuf + chr3L_24_14190001 chr3L_14190001 RAL-382 2141 chr3L 14228087 14228097 chr3L 14228217 14228227 5 130 11.5 0.0 5.8 0.7 140 chr3L 14228087 intron nuf + chr3L 14228157 intron nuf + chr3L 14228227 intron nuf + chr3L_5_14225001 chr3L_14225001 RAL-382 2142 chr3L 14239943 14240006 chr3L 14240079 14240153 22 144 2.5 6.0 4.2 4.2 210 chr3L 14239943 intergenic not near genes chr3L 14240048 intergenic not near genes chr3L 14240153 intergenic not near genes chr3L_22_14240001 chr3L_14240001 RAL-382 2143 chr3L 14245521 14245543 chr3L 14245665 14245687 9 144 15.5 7.0 11.2 0.7 166 chr3L 14245521 3` UTR CR44561 - chr3L 14245604 3` UTR CR44561 - chr3L 14245687 3` UTR CR44561 - chr3L_9_14245001 chr3L_14245001 RAL-382 2144 chr3L 14245550 14245591 chr3L 14245662 14245735 1360 20 139 7.5 7.0 7.2 2.4 185 chr3L 14245550 3` UTR CR44561 - chr3L 14245642 3` UTR CR44561 - chr3L 14245735 intergenic CR44561 -,CR44560 + chr3L_20_14245001 chr3L_14245001 RAL-382 2145 chr3L 14267359 14267399 chr3L 14271821 14271861 F-element 24 4462 7.5 0.0 3.8 5.0 4502 chr3L 14267359 intergenic not near genes chr3L 14269610 intergenic not near genes chr3L 14271861 intergenic not near genes chr3L_24_14265001 chr3L_14265001 RAL-382 2146 chr3L 14282536 14282601 chr3L 14282666 14282731 18 126 6.5 9.5 8.0 2.0 195 chr3L 14282536 intron fz + chr3L 14282634 intron fz + chr3L 14282731 intron fz + chr3L_18_14280001 chr3L_14280001 RAL-382 2147 chr3L 14287271 14287333 chr3L 14287412 14287474 20 141 5.5 7.5 6.5 2.7 203 chr3L 14287271 intron fz + chr3L 14287372 intron fz + chr3L 14287474 intron fz + chr3L_20_14285001 chr3L_14285001 RAL-382 2148 chr3L 14295940 14295963 chr3L 14296476 14296499 roo 11 536 16.5 11.0 13.8 0.7 559 chr3L 14295940 intron fz + chr3L 14296220 intron fz + chr3L 14296499 intron fz + chr3L_11_14295001 chr3L_14295001 RAL-382 2149 chr3L 14295968 14296006 chr3L 14296474 14296542 roo 15 529 9.5 10.5 10.0 1.4 574 chr3L 14295968 intron fz + chr3L 14296255 intron fz + chr3L 14296542 intron fz + chr3L_15_14295001 chr3L_14295001 RAL-382 2150 chr3L 14311984 14312045 chr3L 14316844 14316892 X-element 14 4858 5.0 9.0 7.0 1.8 4908 chr3L 14311984 exon fz + chr3L 14314438 intron fz + chr3L 14316892 intron fz + chr3L_14_14310001 chr3L_14310001 RAL-382 2151 chr3L 14331410 14331480 chr3L 14331543 14331613 22 132 7.0 7.0 7.0 2.8 203 chr3L 14331410 intron fz + chr3L 14331512 intron fz + chr3L 14331613 intron fz + chr3L_22_14330001 chr3L_14330001 RAL-382 2152 chr3L 14338259 14338330 chr3L 14338404 14338473 16 145 3.0 7.5 5.2 2.6 214 chr3L 14338259 intron fz + chr3L 14338366 intron fz + chr3L 14338473 intron fz + chr3L_16_14335001 chr3L_14335001 RAL-382 2153 chr3L 14341398 14341439 chr3L 14341583 14341624 7 185 0.5 13.0 6.8 0.9 226 chr3L 14341398 intron fz + chr3L 14341511 intron fz + chr3L 14341624 intron fz + chr3L_7_14340001 chr3L_14340001 RAL-382 2154 chr3L 14356475 14356547 chr3L 14356605 14356677 21 128 7.0 7.5 7.2 2.6 202 chr3L 14356475 intron fz + chr3L 14356576 intron fz + chr3L 14356677 intron fz + chr3L_21_14355001 chr3L_14355001 RAL-382 2155 chr3L 14385040 14385109 chr3L 14385178 14385247 9 138 9.0 6.5 7.8 1.0 207 chr3L 14385040 intergenic not near genes chr3L 14385144 intergenic not near genes chr3L 14385247 intergenic not near genes chr3L_9_14385001 chr3L_14385001 RAL-382 2156 chr3L 14408968 14409030 chr3L 14409116 14409178 24 148 11.5 6.0 8.8 2.4 210 chr3L 14408968 intron stwl - chr3L 14409073 intron stwl - chr3L 14409178 intron stwl - chr3L_24_14405001 chr3L_14405001 RAL-382 2157 chr3L 14468409 14468475 chr3L 14473665 14473731 copia 31 5255 11.5 9.0 10.2 2.8 5322 chr3L 14468409 intron bbg - chr3L 14471070 intron bbg - chr3L 14473731 intron bbg - chr3L_31_14470001 chr3L_14470001 RAL-382 2158 chr3L 14485977 14485980 chr3L 14486108 14486111 4 131 14.0 11.0 12.5 0.3 134 chr3L 14485977 intron bbg - chr3L 14486044 intron bbg - chr3L 14486111 intron bbg - chr3L_4_14485001 chr3L_14485001 RAL-382 2159 chr3L 14485986 14486048 chr3L 14486101 14486179 22 130 4.5 8.5 6.5 2.9 193 chr3L 14485986 intron bbg - chr3L 14486082 intron bbg - chr3L 14486179 intron bbg - chr3L_22_14485001 chr3L_14485001 RAL-382 2160 chr3L 14522049 14522121 chr3L 14522198 14522270 37 149 11.5 7.0 9.2 3.6 221 chr3L 14522049 intron bbg - chr3L 14522160 intron bbg - chr3L 14522270 intron bbg - chr3L_37_14520001 chr3L_14520001 RAL-382 2161 chr3L 14524292 14524340 chr3L 14529097 14529147 F-element 5 4806 4.5 0.5 2.5 1.4 4855 chr3L 14524292 intron bbg - chr3L 14526720 intron bbg - chr3L 14529147 intron bbg - chr3L_5_14525001 chr3L_14525001 RAL-382 2162 chr3L 14534711 14534766 chr3L 14534838 14534893 27 126 8.5 2.5 5.5 4.2 182 chr3L 14534711 intron bbg - chr3L 14534802 intron bbg - chr3L 14534893 intron bbg - chr3L_27_14530001 chr3L_14530001 RAL-382 2163 chr3L 14546766 14546817 chr3L 14546917 14546967 6 151 0.0 3.5 1.8 2.1 201 chr3L 14546766 intron CG9238 - chr3L 14546866 intron CG9238 - chr3L 14546967 intron CG9238 - chr3L_6_14545001 chr3L_14545001 RAL-382 2164 chr3L 14585564 14585633 chr3L 14585692 14585761 26 126 10.0 9.5 9.8 2.4 197 chr3L 14585564 intron HGTX - chr3L 14585662 intron HGTX - chr3L 14585761 intron HGTX - chr3L_26_14585001 chr3L_14585001 RAL-382 2165 chr3L 14596063 14596073 chr3L 14596193 14596203 6 130 6.5 0.0 3.2 1.4 140 chr3L 14596063 exon HGTX - chr3L 14596133 intron HGTX - chr3L 14596203 intron HGTX - chr3L_6_14595001 chr3L_14595001 RAL-382 2166 chr3L 14602923 14603083 chr3L 14603061 14603210 16 136 0.0 0.0 0.0 16.0 287 chr3L 14602923 intergenic not near genes chr3L 14603066 intergenic not near genes chr3L 14603210 intergenic not near genes chr3L_16_14600001 chr3L_14600001 RAL-382 2167 chr3L 14633742 14633816 chr3L 14633888 14633962 39 146 7.5 6.0 6.8 5.0 220 chr3L 14633742 intron dlp + chr3L 14633852 intron dlp + chr3L 14633962 intron dlp + chr3L_39_14630001 chr3L_14630001 RAL-382 2168 chr3L 14706264 14706313 chr3L 14706375 14706436 6 116 10.0 5.5 7.8 0.7 172 chr3L 14706264 intron ome + chr3L 14706350 intron ome + chr3L 14706436 intron ome + chr3L_6_14705001 chr3L_14705001 RAL-382 2169 chr3L 14721152 14721189 chr3L 14723045 14723062 Rt1c 10 1889 7.0 5.5 6.2 1.4 1910 chr3L 14721152 intron ome + chr3L 14722107 intron ome + chr3L 14723062 intron ome + chr3L_10_14720001 chr3L_14720001 RAL-382 2170 chr3L 14721190 14721201 chr3L 14723025 14723094 Rt1c 8 1881 5.5 3.0 4.2 1.5 1904 chr3L 14721190 intron ome + chr3L 14722142 intron ome + chr3L 14723094 intron ome + chr3L_8_14720001 chr3L_14720001 RAL-382 2171 chr3L 14725522 14725613 chr3L 14728585 14728637 Doc 21 3052 0.0 8.5 4.2 4.0 3115 chr3L 14725522 intron ome + chr3L 14727080 intron ome + chr3L 14728637 intron ome + chr3L_21_14725001 chr3L_14725001 RAL-382 2172 chr3L 14809144 14809211 chr3L 14809275 14809342 29 131 11.5 9.0 10.2 2.6 198 chr3L 14809144 intron CG17839 + chr3L 14809243 intron CG17839 + chr3L 14809342 intron CG17839 + chr3L_29_14805001 chr3L_14805001 RAL-382 2173 chr3L 14825128 14825154 chr3L 14832905 14832931 Stalker2 17 7777 5.0 20.0 12.5 1.3 7803 chr3L 14825128 intron CG17839 + chr3L 14829030 intron CG17839 + chr3L 14832931 intron CG17839 + chr3L_17_14825001 chr3L_14825001 RAL-382 2174 chr3L 14866781 14866831 chr3L 14866922 14866972 24 140 5.0 12.5 8.8 2.4 191 chr3L 14866781 exon CG17839 + chr3L 14866876 intron CG17839 + chr3L 14866972 intron CG17839 + chr3L_24_14865001 chr3L_14865001 RAL-382 2175 chr3L 14869778 14869844 chr3L 14869914 14869965 15 135 6.5 10.5 8.5 1.6 187 chr3L 14869778 intron CG17839 + chr3L 14869872 intron CG17839 + chr3L 14869965 intron CG17839 + chr3L_15_14865001 chr3L_14865001 RAL-382 2176 chr3L 14918399 14918412 chr3L 14918698 14918711 7 299 0.0 15.0 7.5 0.8 312 chr3L 14918399 intron DCX-EMAP + chr3L 14918555 intron DCX-EMAP + chr3L 14918711 intron DCX-EMAP + chr3L_7_14915001 chr3L_14915001 RAL-382 2177 chr3L 14954320 14954352 chr3L 14956039 14956071 transib2 16 1719 16.0 10.0 13.0 1.1 1751 chr3L 14954320 intergenic not near genes chr3L 14955196 intergenic not near genes chr3L 14956071 intergenic not near genes chr3L_16_14955001 chr3L_14955001 RAL-382 2178 chr3L 14954353 14954389 chr3L 14956038 14956108 transib2 19 1717 10.5 10.0 10.2 1.7 1755 chr3L 14954353 intergenic not near genes chr3L 14955230 intergenic not near genes chr3L 14956108 intergenic not near genes chr3L_19_14955001 chr3L_14955001 RAL-382 2179 chr3L 14957954 14957970 chr3L 14958086 14958102 8 132 3.5 0.5 2.0 2.7 148 chr3L 14957954 intergenic not near genes chr3L 14958028 intergenic not near genes chr3L 14958102 intergenic not near genes chr3L_8_14955001 chr3L_14955001 RAL-382 2180 chr3L 14970714 14970763 chr3L 14971074 14971123 F-element 29 360 12.0 12.0 12.0 2.2 409 chr3L 14970714 intergenic Tom + chr3L 14970918 intergenic not near genes chr3L 14971123 intergenic not near genes chr3L_29_14970001 chr3L_14970001 RAL-382 2181 chr3L 14976517 14976543 chr3L 14976669 14976695 13 152 22.5 8.0 15.2 0.8 178 chr3L 14976517 intergenic CR43432 -,Ocho + chr3L 14976606 intergenic CR43432 - chr3L 14976695 3` UTR CR43432 - chr3L_13_14975001 chr3L_14975001 RAL-382 2182 chr3L 15005984 15006044 chr3L 15006175 15006251 20 199 8.0 5.5 6.8 2.6 267 chr3L 15005984 intron Reck - chr3L 15006118 intron Reck - chr3L 15006251 intron Reck - chr3L_20_15005001 chr3L_15005001 RAL-382 2183 chr3L 15024007 15024055 chr3L 15024135 15024184 6 129 0.0 7.5 3.8 1.2 177 chr3L 15024007 intron,3` UTR Sytbeta -,CG32148 + chr3L 15024096 intron Sytbeta - chr3L 15024184 intron Sytbeta - chr3L_6_15020001 chr3L_15020001 RAL-382 2184 chr3L 15084728 15084739 chr3L 15084858 15084869 7 130 8.5 25.5 17.0 0.4 141 chr3L 15084728 intron cp309 - chr3L 15084798 intron cp309 - chr3L 15084869 intron cp309 - chr3L_7_15080001 chr3L_15080001 RAL-382 2185 chr3L 15085003 15085078 chr3L 15086219 15086294 1360 37 1216 11.5 11.0 11.2 3.0 1291 chr3L 15085003 intron cp309 - chr3L 15085648 intron cp309 - chr3L 15086294 intron cp309 - chr3L_37_15085001 chr3L_15085001 RAL-382 2186 chr3L 15094922 15094964 chr3L 15095067 15095109 20 145 15.0 6.5 10.8 1.7 187 chr3L 15094922 intergenic cp309 -,CG6945 -,Aats-gly + chr3L 15095016 intergenic Aats-gly +,cp309 -,CG6945 - chr3L 15095109 intergenic Aats-gly +,cp309 -,CG6945 - chr3L_20_15095001 chr3L_15095001 RAL-382 2187 chr3L 15163609 15163617 chr3L 15163738 15163746 7 128 19.5 0.0 9.8 0.6 137 chr3L 15163609 5` UTR CG7011 - chr3L 15163678 intergenic CG7011 - chr3L 15163746 intergenic CG7011 - chr3L_7_15160001 chr3L_15160001 RAL-382 2188 chr3L 15164973 15165044 chr3L 15165121 15165193 20 148 2.0 6.0 4.0 4.0 220 chr3L 15164973 intergenic not near genes chr3L 15165083 intergenic not near genes chr3L 15165193 intergenic not near genes chr3L_20_15165001 chr3L_15165001 RAL-382 2189 chr3L 15174570 15174605 chr3L 15174723 15174758 14 153 7.5 13.5 10.5 1.2 188 chr3L 15174570 intergenic not near genes chr3L 15174664 intergenic not near genes chr3L 15174758 intergenic not near genes chr3L_14_15170001 chr3L_15170001 RAL-382 2190 chr3L 15219700 15219772 chr3L 15219832 15219904 24 132 10.0 7.5 8.8 2.4 204 chr3L 15219700 intergenic not near genes chr3L 15219802 intergenic not near genes chr3L 15219904 intergenic not near genes chr3L_24_15215001 chr3L_15215001 RAL-382 2191 chr3L 15257382 15257450 chr3L 15257645 15257713 36 263 5.0 5.0 5.0 6.0 331 chr3L 15257382 intergenic not near genes chr3L 15257548 intergenic not near genes chr3L 15257713 intergenic not near genes chr3L_36_15255001 chr3L_15255001 RAL-382 2192 chr3L 15273284 15273360 chr3L 15273480 15273556 22 196 6.0 5.5 5.8 3.2 272 chr3L 15273284 intergenic not near genes chr3L 15273420 intergenic not near genes chr3L 15273556 intergenic not near genes chr3L_22_15270001 chr3L_15270001 RAL-382 2193 chr3L 15286700 15286772 chr3L 15286831 15286878 24 128 8.5 6.0 7.2 2.9 178 chr3L 15286700 intergenic not near genes chr3L 15286789 intergenic not near genes chr3L 15286878 intergenic not near genes chr3L_24_15285001 chr3L_15285001 RAL-382 2194 chr3L 15295717 15295779 chr3L 15298610 15298672 gypsy5 42 2892 12.5 9.5 11.0 3.5 2955 chr3L 15295717 intergenic not near genes chr3L 15297194 intergenic not near genes chr3L 15298672 intergenic Best4 + chr3L_42_15295001 chr3L_15295001 RAL-382 2195 chr3L 15358320 15358384 chr3L 15358501 15358565 24 178 6.5 5.0 5.8 3.5 245 chr3L 15358320 intergenic not near genes chr3L 15358442 intergenic not near genes chr3L 15358565 intergenic not near genes chr3L_24_15355001 chr3L_15355001 RAL-382 2196 chr3L 15384915 15384988 chr3L 15385092 15385134 34 174 8.5 8.5 8.5 3.6 219 chr3L 15384915 intergenic not near genes chr3L 15385024 intergenic not near genes chr3L 15385134 intergenic not near genes chr3L_34_15385001 chr3L_15385001 RAL-382 2197 chr3L 15393618 15393685 chr3L 15393870 15393937 20 252 6.0 11.0 8.5 2.1 319 chr3L 15393618 intergenic not near genes chr3L 15393778 intergenic not near genes chr3L 15393937 intergenic not near genes chr3L_20_15390001 chr3L_15390001 RAL-382 2198 chr3L 15405976 15406048 chr3L 15406108 15406164 15 131 5.0 8.0 6.5 2.0 188 chr3L 15405976 intergenic not near genes chr3L 15406070 intergenic not near genes chr3L 15406164 intergenic not near genes chr3L_15_15405001 chr3L_15405001 RAL-382 2199 chr3L 15423720 15423732 chr3L 15426614 15426626 opus 9 2894 13.5 1.0 7.2 1.1 2906 chr3L 15423720 intergenic not near genes chr3L 15425173 intergenic not near genes chr3L 15426626 intergenic not near genes chr3L_9_15425001 chr3L_15425001 RAL-382 2200 chr3L 15423733 15423782 chr3L 15426611 15426676 opus 23 2893 5.5 1.0 3.2 5.5 2943 chr3L 15423733 intergenic not near genes chr3L 15425204 intergenic not near genes chr3L 15426676 intergenic not near genes chr3L_23_15425001 chr3L_15425001 RAL-382 2201 chr3L 15443547 15443614 chr3L 15443673 15443741 22 127 8.5 8.5 8.5 2.3 194 chr3L 15443547 intergenic not near genes chr3L 15443644 intergenic not near genes chr3L 15443741 intergenic not near genes chr3L_22_15440001 chr3L_15440001 RAL-382 2202 chr3L 15444609 15444681 chr3L 15444753 15444809 28 142 8.0 8.0 8.0 3.1 200 chr3L 15444609 intergenic not near genes chr3L 15444709 intergenic not near genes chr3L 15444809 intergenic not near genes chr3L_28_15440001 chr3L_15440001 RAL-382 2203 chr3L 15453120 15453135 chr3L 15453248 15453263 9 128 8.5 11.0 9.8 0.8 143 chr3L 15453120 intergenic not near genes chr3L 15453192 intergenic not near genes chr3L 15453263 intergenic not near genes chr3L_9_15450001 chr3L_15450001 RAL-382 2204 chr3L 15465992 15466139 chr3L 15466124 15466260 23 151 0.0 0.0 0.0 23.0 268 chr3L 15465992 intergenic not near genes chr3L 15466126 intergenic not near genes chr3L 15466260 intergenic not near genes chr3L_23_15465001 chr3L_15465001 RAL-382 2205 chr3L 15466478 15466543 chr3L 15466612 15466677 28 133 2.0 9.0 5.5 4.3 199 chr3L 15466478 intergenic not near genes chr3L 15466578 intergenic not near genes chr3L 15466677 intergenic not near genes chr3L_28_15465001 chr3L_15465001 RAL-382 2206 chr3L 15472607 15472650 chr3L 15472734 15472777 19 125 16.5 19.0 17.8 1.0 170 chr3L 15472607 3` UTR CG7804 - chr3L 15472692 exon CG7804 - chr3L 15472777 exon CG7804 - chr3L_19_15470001 chr3L_15470001 RAL-382 2207 chr3L 15493317 15493343 chr3L 15493462 15493488 12 145 4.5 12.0 8.2 1.3 171 chr3L 15493317 exon CG12355 - chr3L 15493402 intron CG12355 - chr3L 15493488 5` UTR CG12355 - chr3L_12_15490001 chr3L_15490001 RAL-382 2208 chr3L 15537918 15537937 chr3L 15538044 15538062 8 126 13.5 2.0 7.8 0.9 144 chr3L 15537918 intron CrebA + chr3L 15537990 intron CrebA + chr3L 15538062 intron CrebA + chr3L_8_15535001 chr3L_15535001 RAL-382 2209 chr3L 15540892 15540906 chr3L 15541030 15541044 5 137 22.5 10.0 16.2 0.3 152 chr3L 15540892 intron CrebA + chr3L 15540968 intron CrebA + chr3L 15541044 intron CrebA + chr3L_5_15540001 chr3L_15540001 RAL-382 2210 chr3L 15541573 15541645 chr3L 15541714 15541786 28 141 6.5 2.5 4.5 5.1 213 chr3L 15541573 intron CrebA + chr3L 15541680 intron CrebA + chr3L 15541786 intron CrebA + chr3L_28_15540001 chr3L_15540001 RAL-382 2211 chr3L 15541902 15541970 chr3L 15542046 15542114 27 143 1.5 9.0 5.2 4.4 212 chr3L 15541902 intron CrebA + chr3L 15542008 intron CrebA + chr3L 15542114 intron CrebA + chr3L_27_15540001 chr3L_15540001 RAL-382 2212 chr3L 15626551 15626553 chr3L 15626678 15626680 4 127 5.5 22.0 13.8 0.3 129 chr3L 15626551 intron comm3 - chr3L 15626616 intron comm3 - chr3L 15626680 intron comm3 - chr3L_4_15625001 chr3L_15625001 RAL-382 2213 chr3L 15629849 15629911 chr3L 15630023 15630085 26 173 8.0 8.5 8.2 2.8 236 chr3L 15629849 intron comm3 - chr3L 15629967 intron comm3 - chr3L 15630085 intron comm3 - chr3L_26_15625001 chr3L_15625001 RAL-382 2214 chr3L 15637161 15637190 chr3L 15637287 15637295 4 121 13.5 13.5 13.5 0.3 134 chr3L 15637161 intron comm3 - chr3L 15637228 intron comm3 - chr3L 15637295 intron comm3 - chr3L_4_15635001 chr3L_15635001 RAL-382 2215 chr3L 15658623 15658664 chr3L 15658834 15658885 15 220 12.5 5.5 9.0 1.5 262 chr3L 15658623 intergenic Eig71Eh -,Eig71Eg + chr3L 15658754 intergenic Eig71Eh - chr3L 15658885 intergenic Eig71Eh - chr3L_15_15655001 chr3L_15655001 RAL-382 2216 chr3L 15756842 15756900 chr3L 15756975 15757032 11 132 9.0 0.0 4.5 2.0 190 chr3L 15756842 intergenic not near genes chr3L 15756937 intergenic not near genes chr3L 15757032 intergenic not near genes chr3L_11_15755001 chr3L_15755001 RAL-382 2217 chr3L 15769096 15769123 chr3L 15769237 15769264 11 141 0.0 9.0 4.5 2.0 168 chr3L 15769096 intergenic not near genes chr3L 15769180 intergenic not near genes chr3L 15769264 intergenic not near genes chr3L_11_15765001 chr3L_15765001 RAL-382 2218 chr3L 15775785 15775862 chr3L 15775912 15775988 27 124 5.5 7.0 6.2 3.8 203 chr3L 15775785 intergenic not near genes chr3L 15775886 intergenic not near genes chr3L 15775988 intergenic not near genes chr3L_27_15775001 chr3L_15775001 RAL-382 2219 chr3L 15781605 15781640 chr3L 15781786 15781837 5 187 13.0 0.0 6.5 0.7 232 chr3L 15781605 intergenic not near genes chr3L 15781721 intergenic not near genes chr3L 15781837 intergenic not near genes chr3L_5_15780001 chr3L_15780001 RAL-382 2220 chr3L 15808059 15808073 chr3L 15808194 15808208 10 135 10.5 15.0 12.8 0.7 149 chr3L 15808059 intergenic CG6244 + chr3L 15808134 intergenic CG6244 + chr3L 15808208 intergenic CG6244 + chr3L_10_15805001 chr3L_15805001 RAL-382 2221 chr3L 15811510 15811574 chr3L 15811645 15811709 21 135 7.0 8.5 7.8 2.4 199 chr3L 15811510 intron fwe - chr3L 15811610 intron fwe - chr3L 15811709 intron fwe - chr3L_21_15810001 chr3L_15810001 RAL-382 2222 chr3L 15840391 15840469 chr3L 15840521 15840567 15 134 4.0 4.0 4.0 3.0 176 chr3L 15840391 intron CG32150 - chr3L 15840479 intron CG32150 - chr3L 15840567 intron CG32150 - chr3L_15_15840001 chr3L_15840001 RAL-382 2223 chr3L 15843013 15843050 chr3L 15843206 15843242 10 192 0.0 10.5 5.2 1.6 229 chr3L 15843013 intron CG32150 - chr3L 15843128 intron CG32150 - chr3L 15843242 intron CG32150 - chr3L_10_15840001 chr3L_15840001 RAL-382 2224 chr3L 15896046 15896119 chr3L 15896185 15896258 27 133 4.5 7.5 6.0 3.9 212 chr3L 15896046 intron pHCl - chr3L 15896152 intron pHCl - chr3L 15896258 intron pHCl - chr3L_27_15895001 chr3L_15895001 RAL-382 2225 chr3L 15899202 15899223 chr3L 15899799 15899840 jockey 8 607 5.5 8.0 6.8 1.0 638 chr3L 15899202 intergenic pHCl - chr3L 15899521 intergenic pHCl - chr3L 15899840 intergenic sff - chr3L_8_15895001 chr3L_15895001 RAL-382 2226 chr3L 15899225 15899263 chr3L 15899790 15899879 jockey 10 593 2.0 6.0 4.0 2.0 654 chr3L 15899225 intergenic pHCl - chr3L 15899552 intergenic not near genes chr3L 15899879 intergenic sff - chr3L_10_15895001 chr3L_15895001 RAL-382 2227 chr3L 15929152 15929219 chr3L 15938345 15938416 roo 17 9193 2.5 10.0 6.2 2.4 9264 chr3L 15929152 intron Pka-C3 - chr3L 15933784 intron Pka-C3 - chr3L 15938416 intron Pka-C3 - chr3L_17_15930001 chr3L_15930001 RAL-382 2228 chr3L 16034986 16034992 chr3L 16035127 16035133 8 141 7.5 0.0 3.8 1.7 147 chr3L 16034986 intergenic CG42538 +,CG5895 + chr3L 16035060 intergenic CG42538 +,CG5895 + chr3L 16035133 intergenic CG42538 +,CG5895 + chr3L_8_16035001 chr3L_16035001 RAL-382 2229 chr3L 16162591 16162619 chr3L 16162717 16162753 14 133 8.0 14.0 11.0 1.2 162 chr3L 16162591 intron CG5151 - chr3L 16162672 intron CG5151 - chr3L 16162753 intron CG5151 - chr3L_14_16160001 chr3L_16160001 RAL-382 2230 chr3L 16182025 16182090 chr3L 16182195 16182260 20 170 0.0 10.5 5.2 3.2 235 chr3L 16182025 intergenic not near genes chr3L 16182142 intergenic not near genes chr3L 16182260 intergenic not near genes chr3L_20_16180001 chr3L_16180001 RAL-382 2231 chr3L 16184062 16184129 chr3L 16188931 16188997 X-element 29 4866 8.0 8.0 8.0 3.2 4935 chr3L 16184062 intergenic not near genes chr3L 16186530 intergenic not near genes chr3L 16188997 intergenic not near genes chr3L_29_16185001 chr3L_16185001 RAL-382 2232 chr3L 16220098 16220151 chr3L 16220262 16220319 7 166 7.0 5.5 6.2 1.0 221 chr3L 16220098 intergenic not near genes chr3L 16220208 intergenic not near genes chr3L 16220319 intergenic not near genes chr3L_7_16220001 chr3L_16220001 RAL-382 2233 chr3L 16232569 16232644 chr3L 16232732 16232807 41 162 8.0 10.0 9.0 4.1 238 chr3L 16232569 exon MED10 + chr3L 16232688 3` UTR MED10 + chr3L 16232807 intergenic MED10 +,Hsc20 + chr3L_41_16230001 chr3L_16230001 RAL-382 2234 chr3L 16305370 16305399 chr3L 16305521 16305553 5 166 3.5 5.5 4.5 0.9 183 chr3L 16305370 exon CG13043 - chr3L 16305462 exon CG13043 - chr3L 16305553 exon CG13043 - chr3L_5_16305001 chr3L_16305001 RAL-382 2235 chr3L 16312671 16312700 chr3L 16312831 16312866 10 159 8.5 0.0 4.2 1.9 195 chr3L 16312671 intergenic not near genes chr3L 16312768 intergenic not near genes chr3L 16312866 intergenic not near genes chr3L_10_16310001 chr3L_16310001 RAL-382 2236 chr3L 16359905 16359956 chr3L 16360225 16360276 17 320 4.0 4.5 4.2 3.3 371 chr3L 16359905 intron CG45057 - chr3L 16360090 intron CG45057 - chr3L 16360276 intron CG45057 - chr3L_17_16360001 chr3L_16360001 RAL-382 2237 chr3L 16360840 16360909 chr3L 16360963 16361037 29 126 12.5 10.5 11.5 2.3 197 chr3L 16360840 intron CG45057 - chr3L 16360938 intron CG45057 - chr3L 16361037 intron CG45057 - chr3L_29_16360001 chr3L_16360001 RAL-382 2238 chr3L 16431783 16431863 chr3L 16431927 16432007 22 144 5.0 0.0 2.5 6.3 224 chr3L 16431783 intron,intron CG33158 +,dsx-c73A - chr3L 16431895 intron,intron CG33158 +,dsx-c73A - chr3L 16432007 intron,intron CG33158 +,dsx-c73A - chr3L_22_16430001 chr3L_16430001 RAL-382 2239 chr3L 16443798 16443877 chr3L 16446190 16446267 Doc 28 2388 5.5 7.5 6.5 3.7 2469 chr3L 16443798 intron,intron CG33158 +,dsx-c73A - chr3L 16445032 intron,intron CG33158 +,dsx-c73A - chr3L 16446267 intron,intron CG33158 +,dsx-c73A - chr3L_28_16445001 chr3L_16445001 RAL-382 2240 chr3L 16493940 16494003 chr3L 16494507 16494545 jockey 26 565 5.5 13.0 9.2 2.5 605 chr3L 16493940 intron,exon,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494242 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494545 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_26_16490001 chr3L_16490001 RAL-382 2241 chr3L 16503614 16503658 chr3L 16503722 16503722 7 106 6.0 8.5 7.2 0.9 108 chr3L 16503614 intron CG43373 - chr3L 16503668 intron CG43373 - chr3L 16503722 intron CG43373 - chr3L_7_16500001 chr3L_16500001 RAL-382 2242 chr3L 16511271 16511344 chr3L 16511582 16511655 27 303 5.5 7.5 6.5 3.6 384 chr3L 16511271 intron CG43373 - chr3L 16511463 intron CG43373 - chr3L 16511655 intron CG43373 - chr3L_27_16510001 chr3L_16510001 RAL-382 2243 chr3L 16533514 16533586 chr3L 16533675 16533747 34 159 0.0 4.0 2.0 11.3 233 chr3L 16533514 intron CG43373 - chr3L 16533630 intron CG43373 - chr3L 16533747 intron CG43373 - chr3L_34_16530001 chr3L_16530001 RAL-382 2244 chr3L 16537821 16537869 chr3L 16537958 16538006 19 137 6.0 19.0 12.5 1.4 185 chr3L 16537821 intron CG43373 - chr3L 16537914 intron CG43373 - chr3L 16538006 intron CG43373 - chr3L_19_16535001 chr3L_16535001 RAL-382 2245 chr3L 16540011 16540075 chr3L 16540149 16540193 28 135 8.0 7.5 7.8 3.2 182 chr3L 16540011 intron CG43373 - chr3L 16540102 intron CG43373 - chr3L 16540193 intron CG43373 - chr3L_28_16540001 chr3L_16540001 RAL-382 2246 chr3L 16560263 16560332 chr3L 16560398 16560465 20 132 6.0 8.0 7.0 2.5 202 chr3L 16560263 intergenic not near genes chr3L 16560364 intergenic not near genes chr3L 16560465 intergenic not near genes chr3L_20_16560001 chr3L_16560001 RAL-382 2247 chr3L 16561075 16561134 chr3L 16561186 16561262 23 119 6.5 9.0 7.8 2.6 187 chr3L 16561075 intergenic not near genes chr3L 16561168 intergenic not near genes chr3L 16561262 intergenic not near genes chr3L_23_16560001 chr3L_16560001 RAL-382 2248 chr3L 16563182 16563206 chr3L 16563313 16563337 16 131 16.0 0.5 8.2 1.7 155 chr3L 16563182 intergenic Mipp1 - chr3L 16563260 intergenic Mipp1 - chr3L 16563337 intergenic Mipp1 - chr3L_16_16560001 chr3L_16560001 RAL-382 2249 chr3L 16616464 16616535 chr3L 16621842 16621887 297 38 5373 9.5 6.5 8.0 4.2 5423 chr3L 16616464 3` UTR Abl - chr3L 16619176 3` UTR Abl - chr3L 16621887 3` UTR Abl - chr3L_38_16615001 chr3L_16615001 RAL-382 2250 chr3L 16642762 16642836 chr3L 16642889 16642970 20 125 3.5 6.0 4.8 3.4 208 chr3L 16642762 intron Abl - chr3L 16642866 intron Abl - chr3L 16642970 intron Abl - chr3L_20_16640001 chr3L_16640001 RAL-382 2251 chr3L 16652638 16652711 chr3L 16652767 16652840 41 127 10.0 11.0 10.5 3.6 202 chr3L 16652638 intron Baldspot - chr3L 16652739 intron Baldspot - chr3L 16652840 intron Baldspot - chr3L_41_16650001 chr3L_16650001 RAL-382 2252 chr3L 16659523 16659534 chr3L 16659654 16659665 5 131 10.0 0.0 5.0 0.8 142 chr3L 16659523 intron Baldspot - chr3L 16659594 intron Baldspot - chr3L 16659665 intron Baldspot - chr3L_5_16655001 chr3L_16655001 RAL-382 2253 chr3L 16683981 16684038 chr3L 16689252 16689309 copia 35 5271 9.5 14.5 12.0 2.7 5328 chr3L 16683981 intron,intron Lasp -,CG43954 - chr3L 16686645 intron,intron Lasp -,CG43954 - chr3L 16689309 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_35_16685001 chr3L_16685001 RAL-382 2254 chr3L 16725551 16725552 chr3L 21901482 21901483 5 5175931 28.5 39.5 34.0 0.1 5175932 chr3L 16725551 3` UTR CG13026 - chr3L 19313517 intron pip - chr3L 21901483 intron mub + chr3L_5_19310001 chr3L_19310001 RAL-382 2255 chr3L 16756736 16756812 chr3L 16756969 16757013 24 226 7.5 19.0 13.2 1.7 277 chr3L 16756736 intergenic not near genes chr3L 16756874 intergenic not near genes chr3L 16757013 intergenic not near genes chr3L_24_16755001 chr3L_16755001 RAL-382 2256 chr3L 16807992 16808074 chr3L 16808119 16808203 24 128 9.5 9.0 9.2 2.4 211 chr3L 16807992 intron nudC + chr3L 16808098 intron nudC + chr3L 16808203 intron nudC + chr3L_24_16805001 chr3L_16805001 RAL-382 2257 chr3L 16818701 16818774 chr3L 16818827 16818900 33 126 9.5 7.5 8.5 3.5 199 chr3L 16818701 intron,intron nudC +,CG13024 - chr3L 16818800 intron,intron nudC +,CG13024 - chr3L 16818900 intron,intron nudC +,CG13024 - chr3L_33_16815001 chr3L_16815001 RAL-382 2258 chr3L 16844984 16844991 chr3L 16845147 16845154 4 163 14.0 14.5 14.2 0.3 170 chr3L 16844984 5` UTR CG9669 - chr3L 16845069 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845154 intergenic CG9669 -,CG9715 + chr3L_4_16845001 chr3L_16845001 RAL-382 2259 chr3L 16844992 16845038 chr3L 16845134 16845201 12 161 7.5 11.5 9.5 1.1 209 chr3L 16844992 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845096 intergenic CG9669 -,CG9715 + chr3L 16845201 intergenic CG9715 +,CG9669 - chr3L_12_16845001 chr3L_16845001 RAL-382 2260 chr3L 16873300 16873356 chr3L 16873453 16873511 31 154 14.5 13.5 14.0 2.1 211 chr3L 16873300 intron Lmpt + chr3L 16873406 intron Lmpt + chr3L 16873511 intron Lmpt + chr3L_31_16870001 chr3L_16870001 RAL-382 2261 chr3L 16886850 16886853 chr3L 16886974 16886979 4 126 24.5 0.0 12.2 0.3 129 chr3L 16886850 intron Lmpt + chr3L 16886914 intron Lmpt + chr3L 16886979 intron Lmpt + chr3L_4_16885001 chr3L_16885001 RAL-382 2262 chr3L 16894742 16894809 chr3L 16894870 16894944 13 132 5.0 0.0 2.5 3.7 202 chr3L 16894742 intron Lmpt + chr3L 16894843 intron Lmpt + chr3L 16894944 intron Lmpt + chr3L_13_16890001 chr3L_16890001 RAL-382 2263 chr3L 16945686 16945691 chr3L 16954889 16954894 roo 6 9203 19.0 12.0 15.5 0.4 9208 chr3L 16945686 exon Obp73a + chr3L 16950290 intergenic not near genes chr3L 16954894 5` UTR Nc73EF + chr3L_6_16950001 chr3L_16950001 RAL-382 2264 chr3L 16945695 16945734 chr3L 16954885 16954894 roo 10 9188 10.5 10.5 10.5 0.9 9199 chr3L 16945695 exon Obp73a + chr3L 16950294 intergenic not near genes chr3L 16954894 5` UTR Nc73EF + chr3L_10_16950001 chr3L_16950001 RAL-382 2265 chr3L 16945737 16945761 chr3L 16954880 16954887 roo 12 9187 6.0 9.0 7.5 1.4 9150 chr3L 16945737 exon Obp73a + chr3L 16950312 intergenic not near genes chr3L 16954887 5` UTR Nc73EF + chr3L_12_16950001 chr3L_16950001 RAL-382 2266 chr3L 17026755 17026818 chr3L 17026871 17026949 31 123 11.0 7.5 9.2 3.0 194 chr3L 17026755 exon Fit2 + chr3L 17026852 3` UTR Fit2 + chr3L 17026949 3` UTR Fit2 + chr3L_31_17025001 chr3L_17025001 RAL-382 2267 chr3L 17027129 17027185 chr3L 17027271 17027327 14 141 6.0 9.5 7.8 1.6 198 chr3L 17027129 intergenic Fit2 +,CG7730 + chr3L 17027228 intergenic Fit2 +,CG7730 + chr3L 17027327 intergenic CG7730 +,Fit2 + chr3L_14_17025001 chr3L_17025001 RAL-382 2268 chr3L 17034889 17034954 chr3L 17035122 17035192 G2 16 235 6.0 9.5 7.8 1.8 303 chr3L 17034889 intergenic not near genes chr3L 17035040 intergenic not near genes chr3L 17035192 intergenic beg + chr3L_16_17035001 chr3L_17035001 RAL-382 2269 chr3L 17084960 17085029 chr3L 17094159 17094228 roo 33 9199 13.5 14.0 13.8 2.2 9268 chr3L 17084960 intron Rbp6 - chr3L 17089594 intron Rbp6 - chr3L 17094228 intron Rbp6 - chr3L_33_17085001 chr3L_17085001 RAL-382 2270 chr3L 17223878 17223950 chr3L 17224002 17224078 16 116 1.0 5.0 3.0 4.0 200 chr3L 17223878 intron Rbp6 - chr3L 17223978 intron Rbp6 - chr3L 17224078 intron Rbp6 - chr3L_16_17220001 chr3L_17220001 RAL-382 2271 chr3L 17237341 17237406 chr3L 17237537 17237608 24 201 8.5 5.5 7.0 3.0 267 chr3L 17237341 intron Rbp6 - chr3L 17237474 intron Rbp6 - chr3L 17237608 intron Rbp6 - chr3L_24_17235001 chr3L_17235001 RAL-382 2272 chr3L 17250429 17250466 chr3L 17250556 17250569 10 120 7.0 14.0 10.5 0.9 140 chr3L 17250429 intron CR43870 + chr3L 17250499 intron CR43870 + chr3L 17250569 intron CR43870 + chr3L_10_17250001 chr3L_17250001 RAL-382 2273 chr3L 17265317 17265318 chr3L 17265421 17265432 4 119 9.0 8.0 8.5 0.4 115 chr3L 17265317 intergenic CG13723 + chr3L 17265374 intergenic CG13723 + chr3L 17265432 intergenic CG13723 + chr3L_4_17265001 chr3L_17265001 RAL-382 2274 chr3L 17265321 17265333 chr3L 17265409 17265462 7 117 5.0 7.5 6.2 1.0 141 chr3L 17265321 intergenic CG13723 + chr3L 17265392 intergenic CG13723 + chr3L 17265462 intergenic CG13723 + chr3L_7_17265001 chr3L_17265001 RAL-382 2275 chr3L 17431252 17431325 chr3L 17431388 17431461 31 135 6.5 9.5 8.0 3.4 209 chr3L 17431252 intron,3` UTR CG32174 -,frc - chr3L 17431356 intron,3` UTR CG32174 -,frc - chr3L 17431461 intron,3` UTR CG32174 -,frc - chr3L_31_17430001 chr3L_17430001 RAL-382 2276 chr3L 17461971 17461993 chr3L 17462166 17462188 13 195 9.5 8.0 8.8 1.3 217 chr3L 17461971 intergenic not near genes chr3L 17462080 intergenic not near genes chr3L 17462188 intergenic not near genes chr3L_13_17460001 chr3L_17460001 RAL-382 2277 chr3L 17495197 17495258 chr3L 17495344 17495406 17 151 4.5 6.0 5.2 2.7 209 chr3L 17495197 intron,exon Oatp74D +,edin + chr3L 17495302 intron Oatp74D + chr3L 17495406 intron Oatp74D + chr3L_17_17495001 chr3L_17495001 RAL-382 2278 chr3L 17498056 17498114 chr3L 17498183 17498241 20 125 7.5 6.0 6.8 2.6 185 chr3L 17498056 intron Oatp74D + chr3L 17498148 intron Oatp74D + chr3L 17498241 intron Oatp74D + chr3L_20_17495001 chr3L_17495001 RAL-382 2279 chr3L 17510695 17510760 chr3L 17510829 17510894 15 133 3.5 5.0 4.2 2.9 199 chr3L 17510695 exon Oatp74D + chr3L 17510794 intron Oatp74D + chr3L 17510894 intron Oatp74D + chr3L_15_17510001 chr3L_17510001 RAL-382 2280 chr3L 17516933 17517002 chr3L 17524541 17524610 412 26 7605 13.0 7.5 10.2 2.3 7677 chr3L 17516933 intron CG7564 + chr3L 17520772 intron CG7564 + chr3L 17524610 3` UTR CG7564 + chr3L_26_17520001 chr3L_17520001 RAL-382 2281 chr3L 17535784 17535839 chr3L 17535931 17535967 21 151 3.0 7.0 5.0 3.5 183 chr3L 17535784 intron Nedd4 + chr3L 17535876 intron Nedd4 + chr3L 17535967 intron Nedd4 + chr3L_21_17535001 chr3L_17535001 RAL-382 2282 chr3L 17580536 17580573 chr3L 17580762 17580799 17 225 20.0 0.5 10.2 1.5 263 chr3L 17580536 intron Eip74EF - chr3L 17580668 intron Eip74EF - chr3L 17580799 intron Eip74EF - chr3L_17_17580001 chr3L_17580001 RAL-382 2283 chr3L 17678853 17678890 chr3L 17678987 17679024 18 134 8.5 0.0 4.2 3.5 171 chr3L 17678853 intron CG34251 + chr3L 17678938 intron CG34251 + chr3L 17679024 intron CG34251 + chr3L_18_17675001 chr3L_17675001 RAL-382 2284 chr3L 17701136 17701178 chr3L 17701266 17701309 16 129 3.5 13.5 8.5 1.7 173 chr3L 17701136 intron Ccn + chr3L 17701222 intron Ccn + chr3L 17701309 intron Ccn + chr3L_16_17700001 chr3L_17700001 RAL-382 2285 chr3L 17789798 17789871 chr3L 17789924 17789997 15 124 9.0 11.0 10.0 1.4 199 chr3L 17789798 intergenic not near genes chr3L 17789898 intergenic not near genes chr3L 17789997 intergenic not near genes chr3L_15_17785001 chr3L_17785001 RAL-382 2286 chr3L 17790577 17790635 chr3L 17790892 17790950 20 314 3.5 12.5 8.0 2.2 373 chr3L 17790577 intergenic not near genes chr3L 17790764 intergenic CG42815 - chr3L 17790950 intergenic CG42815 - chr3L_20_17790001 chr3L_17790001 RAL-382 2287 chr3L 17791891 17791917 chr3L 17792018 17792044 16 127 9.0 6.5 7.8 1.8 153 chr3L 17791891 intergenic CG42816 -,CG42815 - chr3L 17791968 intergenic CG42816 -,CG42815 - chr3L 17792044 intergenic CG42816 - chr3L_16_17790001 chr3L_17790001 RAL-382 2288 chr3L 17799765 17799834 chr3L 17801602 17801671 S-element 38 1836 13.0 11.5 12.2 2.9 1906 chr3L 17799765 intron NUCB1 - chr3L 17800718 intron NUCB1 - chr3L 17801671 intron NUCB1 - chr3L_38_17800001 chr3L_17800001 RAL-382 2289 chr3L 17834299 17834352 chr3L 17834498 17834566 21 213 4.5 8.5 6.5 2.8 267 chr3L 17834299 intron Grd + chr3L 17834432 intron Grd + chr3L 17834566 intron Grd + chr3L_21_17830001 chr3L_17830001 RAL-382 2290 chr3L 17837588 17837597 chr3L 17837726 17837735 6 138 8.0 8.5 8.2 0.7 147 chr3L 17837588 exon Grd + chr3L 17837662 intron Grd + chr3L 17837735 intron Grd + chr3L_6_17835001 chr3L_17835001 RAL-382 2291 chr3L 17837603 17837644 chr3L 17837722 17837782 14 136 5.0 7.5 6.2 1.9 179 chr3L 17837603 exon Grd + chr3L 17837692 intron Grd + chr3L 17837782 exon Grd + chr3L_14_17835001 chr3L_17835001 RAL-382 2292 chr3L 17918333 17918368 chr3L 17921186 17921221 opus 8 2852 7.0 10.0 8.5 0.8 2888 chr3L 17918333 intergenic not near genes chr3L 17919777 intergenic not near genes chr3L 17921221 intergenic not near genes chr3L_8_17915001 chr3L_17915001 RAL-382 2293 chr3L 17918371 17918396 chr3L 17921177 17921249 opus 5 2844 3.5 7.5 5.5 0.8 2878 chr3L 17918371 intergenic not near genes chr3L 17919810 intergenic not near genes chr3L 17921249 intergenic not near genes chr3L_5_17915001 chr3L_17915001 RAL-382 2294 chr3L 17957022 17957038 chr3L 17957162 17957168 7 137 15.0 9.5 12.2 0.5 146 chr3L 17957022 intron Eip75B - chr3L 17957095 intron Eip75B - chr3L 17957168 intron Eip75B - chr3L_7_17955001 chr3L_17955001 RAL-382 2295 chr3L 17957043 17957077 chr3L 17957155 17957216 10 137 6.0 7.5 6.8 1.3 173 chr3L 17957043 intron Eip75B - chr3L 17957130 intron Eip75B - chr3L 17957216 intron Eip75B - chr3L_10_17955001 chr3L_17955001 RAL-382 2296 chr3L 17968093 17968159 chr3L 17968224 17968289 30 128 8.5 9.0 8.8 3.1 196 chr3L 17968093 intron Eip75B - chr3L 17968191 intron Eip75B - chr3L 17968289 intron Eip75B - chr3L_30_17965001 chr3L_17965001 RAL-382 2297 chr3L 17991529 17991584 chr3L 17991657 17991712 26 127 15.5 13.0 14.2 1.7 183 chr3L 17991529 intron Eip75B - chr3L 17991620 intron Eip75B - chr3L 17991712 intron Eip75B - chr3L_26_17990001 chr3L_17990001 RAL-382 2298 chr3L 17999724 17999793 chr3L 17999853 17999920 12 129 0.0 0.0 0.0 12.0 196 chr3L 17999724 intron Eip75B - chr3L 17999822 intron Eip75B - chr3L 17999920 intron Eip75B - chr3L_12_17995001 chr3L_17995001 RAL-382 2299 chr3L 18002675 18002742 chr3L 18002812 18002879 18 137 3.0 7.0 5.0 3.0 204 chr3L 18002675 intron Eip75B - chr3L 18002777 intron Eip75B - chr3L 18002879 intron Eip75B - chr3L_18_18000001 chr3L_18000001 RAL-382 2300 chr3L 18023996 18024042 chr3L 18024149 18024195 18 152 9.0 0.0 4.5 3.3 199 chr3L 18023996 intron Eip75B - chr3L 18024096 intron Eip75B - chr3L 18024195 intron Eip75B - chr3L_18_18020001 chr3L_18020001 RAL-382 2301 chr3L 18027054 18027069 chr3L 18027188 18027203 8 134 5.5 21.5 13.5 0.6 149 chr3L 18027054 intron Eip75B - chr3L 18027128 intron Eip75B - chr3L 18027203 intron Eip75B - chr3L_8_18025001 chr3L_18025001 RAL-382 2302 chr3L 18029256 18029327 chr3L 18029410 18029438 9 148 0.0 8.0 4.0 1.8 182 chr3L 18029256 intron Eip75B - chr3L 18029347 intron Eip75B - chr3L 18029438 intron Eip75B - chr3L_9_18025001 chr3L_18025001 RAL-382 2303 chr3L 18047661 18047734 chr3L 18056768 18056841 roo 37 9106 9.5 9.0 9.2 3.6 9180 chr3L 18047661 intron Eip75B - chr3L 18052251 intron Eip75B - chr3L 18056841 intron Eip75B - chr3L_37_18050001 chr3L_18050001 RAL-382 2304 chr3L 18107569 18107647 chr3L 18107712 18107794 30 143 6.0 8.5 7.2 3.7 225 chr3L 18107569 intergenic mRpS26 +,CG5147 - chr3L 18107682 intergenic CG5147 -,mRpS26 + chr3L 18107794 intergenic CG5147 -,mRpS26 + chr3L_30_18105001 chr3L_18105001 RAL-382 2305 chr3L 18113265 18113284 chr3L 18113412 18113431 10 147 8.0 25.0 16.5 0.6 166 chr3L 18113265 intron,intron CG32195 +,CG7341 + chr3L 18113348 intron,intron CG32195 +,CG7341 + chr3L 18113431 intron,intron CG32195 +,CG7341 + chr3L_10_18110001 chr3L_18110001 RAL-382 2306 chr3L 18118166 18118221 chr3L 18118294 18118349 18 127 5.5 0.5 3.0 4.5 183 chr3L 18118166 3` UTR,intron CG32195 +,CG7341 + chr3L 18118258 3` UTR,intron CG32195 +,CG7341 + chr3L 18118349 3` UTR,intron CG32195 +,CG7341 + chr3L_18_18115001 chr3L_18115001 RAL-382 2307 chr3L 18136638 18136686 chr3L 18136766 18136814 13 128 0.0 5.0 2.5 3.7 176 chr3L 18136638 intergenic CR44669 - chr3L 18136726 intergenic CR44669 - chr3L 18136814 intergenic not near genes chr3L_13_18135001 chr3L_18135001 RAL-382 2308 chr3L 18150271 18150329 chr3L 18150418 18150475 23 145 7.5 11.0 9.2 2.3 204 chr3L 18150271 intron CG7330 + chr3L 18150373 intron CG7330 + chr3L 18150475 intron CG7330 + chr3L_23_18150001 chr3L_18150001 RAL-382 2309 chr3L 18152681 18152754 chr3L 18152842 18152914 19 161 6.5 5.0 5.8 2.8 233 chr3L 18152681 intron CG7330 + chr3L 18152798 intron CG7330 + chr3L 18152914 intron CG7330 + chr3L_19_18150001 chr3L_18150001 RAL-382 2310 chr3L 18172644 18172703 chr3L 18172770 18172829 6 126 9.0 0.0 4.5 1.1 185 chr3L 18172644 intron W - chr3L 18172736 intron W - chr3L 18172829 intron W - chr3L_6_18170001 chr3L_18170001 RAL-382 2311 chr3L 18189544 18189558 chr3L 18190221 18190235 S-element 7 677 14.5 11.5 13.0 0.5 691 chr3L 18189544 intergenic not near genes chr3L 18189890 intergenic not near genes chr3L 18190235 intergenic not near genes chr3L_7_18185001 chr3L_18185001 RAL-382 2312 chr3L 18189563 18189584 chr3L 18190215 18190261 S-element 10 672 14.5 10.5 12.5 0.7 698 chr3L 18189563 intergenic not near genes chr3L 18189912 intergenic not near genes chr3L 18190261 intergenic not near genes chr3L_10_18185001 chr3L_18185001 RAL-382 2313 chr3L 18198929 18198931 chr3L 24821492 24821494 21 6622563 35.5 22.5 29.0 0.7 6622565 chr3L 18198929 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821494 intergenic not near genes chr3L_21_21510001 chr3L_21510001 RAL-382 2314 chr3L 18209161 18209200 chr3L 18209297 18209336 20 136 5.5 9.5 7.5 2.4 175 chr3L 18209161 intergenic not near genes chr3L 18209248 intergenic not near genes chr3L 18209336 intergenic not near genes chr3L_20_18205001 chr3L_18205001 RAL-382 2315 chr3L 18221043 18221128 chr3L 18221185 18221263 13 137 0.0 2.0 1.0 6.5 220 chr3L 18221043 intergenic not near genes chr3L 18221153 intergenic not near genes chr3L 18221263 intergenic not near genes chr3L_13_18220001 chr3L_18220001 RAL-382 2316 chr3L 18223114 18223185 chr3L 18223247 18223330 23 138 8.5 0.0 4.2 4.4 216 chr3L 18223114 intergenic not near genes chr3L 18223222 intergenic not near genes chr3L 18223330 intergenic not near genes chr3L_23_18220001 chr3L_18220001 RAL-382 2317 chr3L 18234215 18234280 chr3L 18234364 18234429 27 140 7.0 6.5 6.8 3.5 214 chr3L 18234215 intergenic not near genes chr3L 18234322 intergenic not near genes chr3L 18234429 intergenic not near genes chr3L_27_18230001 chr3L_18230001 RAL-382 2318 chr3L 18253635 18253714 chr3L 18253894 18253974 23 259 5.5 5.0 5.2 3.7 339 chr3L 18253635 intergenic not near genes chr3L 18253804 intergenic not near genes chr3L 18253974 intergenic not near genes chr3L_23_18250001 chr3L_18250001 RAL-382 2319 chr3L 18262427 18262487 chr3L 18262560 18262621 24 133 7.0 9.0 8.0 2.7 194 chr3L 18262427 intergenic not near genes chr3L 18262524 intergenic not near genes chr3L 18262621 intergenic not near genes chr3L_24_18260001 chr3L_18260001 RAL-382 2320 chr3L 18301305 18301376 chr3L 18301443 18301515 23 139 4.0 4.5 4.2 4.4 210 chr3L 18301305 intergenic CG13700 - chr3L 18301410 intergenic CG13700 - chr3L 18301515 intergenic CG13700 - chr3L_23_18300001 chr3L_18300001 RAL-382 2321 chr3L 18343669 18343676 chr3L 18343997 18344002 4 328 8.5 14.0 11.2 0.3 333 chr3L 18343669 intergenic not near genes chr3L 18343836 intergenic not near genes chr3L 18344002 intergenic not near genes chr3L_4_18340001 chr3L_18340001 RAL-382 2322 chr3L 18386870 18386882 chr3L 18386998 18387012 7 130 0.0 11.0 5.5 1.1 142 chr3L 18386870 intergenic not near genes chr3L 18386941 intergenic not near genes chr3L 18387012 intergenic not near genes chr3L_7_18385001 chr3L_18385001 RAL-382 2323 chr3L 9013689 9013693 chr3L 18417066 18417066 9 9403375 42.0 24.5 33.2 0.3 9403377 chr3L 9013689 intron Doc2 - chr3L 13715378 intron bru-3 - chr3L 18417066 intergenic not near genes chr3L_9_13715001 chr3L_13715001 RAL-382 2324 chr3L 18420028 18420090 chr3L 18420162 18420208 17 132 4.0 9.5 6.8 2.2 180 chr3L 18420028 intergenic not near genes chr3L 18420118 intergenic not near genes chr3L 18420208 intergenic not near genes chr3L_17_18420001 chr3L_18420001 RAL-382 2325 chr3L 18445204 18445217 chr3L 18445332 18445345 6 128 17.5 8.5 13.0 0.4 141 chr3L 18445204 intergenic not near genes chr3L 18445274 intergenic not near genes chr3L 18445345 intergenic not near genes chr3L_6_18445001 chr3L_18445001 RAL-382 2326 chr3L 18445221 18445278 chr3L 18445328 18445406 21 123 7.5 8.0 7.8 2.4 185 chr3L 18445221 intergenic not near genes chr3L 18445314 intergenic not near genes chr3L 18445406 intergenic not near genes chr3L_21_18445001 chr3L_18445001 RAL-382 2327 chr3L 18448574 18448618 chr3L 18448716 18448760 20 142 10.0 6.0 8.0 2.2 186 chr3L 18448574 intergenic not near genes chr3L 18448667 intergenic not near genes chr3L 18448760 intergenic not near genes chr3L_20_18445001 chr3L_18445001 RAL-382 2328 chr3L 18456228 18456300 chr3L 18456366 18456438 22 136 6.5 8.0 7.2 2.7 210 chr3L 18456228 intergenic CR44670 - chr3L 18456333 intergenic CR44670 - chr3L 18456438 3` UTR CR44670 - chr3L_22_18455001 chr3L_18455001 RAL-382 2329 chr3L 18484785 18484858 chr3L 18484922 18484995 24 136 12.0 5.5 8.8 2.4 210 chr3L 18484785 intergenic AstC-R2 - chr3L 18484890 intergenic AstC-R2 - chr3L 18484995 intergenic AstC-R2 - chr3L_24_18480001 chr3L_18480001 RAL-382 2330 chr3L 18503878 18503915 chr3L 18504370 18504406 11 485 13.0 8.0 10.5 1.0 528 chr3L 18503878 intergenic not near genes chr3L 18504142 intergenic not near genes chr3L 18504406 intergenic not near genes chr3L_11_18500001 chr3L_18500001 RAL-382 2331 chr3L 18503916 18503947 chr3L 18504362 18504439 8 477 6.5 4.0 5.2 1.3 523 chr3L 18503916 intergenic not near genes chr3L 18504178 intergenic not near genes chr3L 18504439 intergenic not near genes chr3L_8_18500001 chr3L_18500001 RAL-382 2332 chr3L 18506092 18506156 chr3L 18509605 18509669 F-element 31 3512 9.5 13.0 11.2 2.5 3577 chr3L 18506092 intergenic not near genes chr3L 18507880 intergenic not near genes chr3L 18509669 intergenic not near genes chr3L_31_18505001 chr3L_18505001 RAL-382 2333 chr3L 18514856 18514929 chr3L 18520100 18520123 BS 23 5241 7.5 11.5 9.5 2.2 5267 chr3L 18514856 intergenic not near genes chr3L 18517490 intergenic not near genes chr3L 18520123 intergenic not near genes chr3L_23_18515001 chr3L_18515001 RAL-382 2334 chr3L 18520509 18520575 chr3L 18520640 18520706 15 130 5.5 7.5 6.5 2.0 197 chr3L 18520509 intergenic not near genes chr3L 18520608 intergenic not near genes chr3L 18520706 intergenic not near genes chr3L_15_18520001 chr3L_18520001 RAL-382 2335 chr3L 18525414 18525423 chr3L 18525693 18525703 5 280 24.0 5.5 14.8 0.3 289 chr3L 18525414 intergenic not near genes chr3L 18525558 intergenic not near genes chr3L 18525703 intergenic not near genes chr3L_5_18525001 chr3L_18525001 RAL-382 2336 chr3L 18525424 18525488 chr3L 18525690 18525768 18 278 7.0 5.5 6.2 2.5 344 chr3L 18525424 intergenic not near genes chr3L 18525596 intergenic not near genes chr3L 18525768 intergenic not near genes chr3L_18_18525001 chr3L_18525001 RAL-382 2337 chr3L 18528585 18528652 chr3L 18537796 18537863 roo 44 9210 12.0 3.0 7.5 5.2 9278 chr3L 18528585 intergenic not near genes chr3L 18533224 intergenic not near genes chr3L 18537863 intergenic not near genes chr3L_44_18530001 chr3L_18530001 RAL-382 2338 chr3L 18549780 18549829 chr3L 18549921 18549980 22 145 1.0 1.5 1.2 10.0 200 chr3L 18549780 intergenic not near genes chr3L 18549880 intergenic not near genes chr3L 18549980 intergenic not near genes chr3L_22_18545001 chr3L_18545001 RAL-382 2339 chr3L 18570730 18570805 chr3L 18570923 18570998 24 193 4.5 5.0 4.8 4.1 268 chr3L 18570730 intron AstC-R1 + chr3L 18570864 intron AstC-R1 + chr3L 18570998 intron AstC-R1 + chr3L_24_18570001 chr3L_18570001 RAL-382 2340 chr3L 18581290 18581353 chr3L 18581417 18581480 23 124 12.5 8.5 10.5 2.0 190 chr3L 18581290 intergenic not near genes chr3L 18581385 intergenic not near genes chr3L 18581480 intergenic not near genes chr3L_23_18580001 chr3L_18580001 RAL-382 2341 chr3L 18586562 18586577 chr3L 18586648 18586709 6 121 5.0 9.0 7.0 0.8 147 chr3L 18586562 intergenic not near genes chr3L 18586636 intergenic not near genes chr3L 18586709 intergenic not near genes chr3L_6_18585001 chr3L_18585001 RAL-382 2342 chr3L 18593905 18593981 chr3L 18595935 18596014 Doc 31 2029 9.5 5.5 7.5 3.6 2109 chr3L 18593905 intergenic term - chr3L 18594960 intergenic not near genes chr3L 18596014 intergenic CR45389 + chr3L_31_18590001 chr3L_18590001 RAL-382 2343 chr3L 18611793 18611810 chr3L 18617093 18617111 10 5301 54.0 52.5 53.2 0.2 5318 chr3L 18611793 intron,intron,3` UTR CG13380 -,CG4174 -,CG32201 + chr3L 18614452 intron,intron CG13380 -,CG4174 - chr3L 18617111 intron,intron CG13380 -,CG4174 - chr3L_10_18610001 chr3L_18610001 RAL-382 2344 chr3L 18611781 18611829 chr3L 18617117 18617154 21 5308 54.0 49.0 51.5 0.4 5373 chr3L 18611781 intron,intron,3` UTR CG13380 -,CG4174 -,CG32201 + chr3L 18614468 intron,intron CG13380 -,CG4174 - chr3L 18617154 exon,5` UTR CG13380 -,CG4174 - chr3L_21_18610001 chr3L_18610001 RAL-382 2345 chr3L 18647650 18647664 chr3L 18647793 18647807 10 143 24.0 9.0 16.5 0.6 157 chr3L 18647650 intron MYPT-75D + chr3L 18647728 intron MYPT-75D + chr3L 18647807 intron MYPT-75D + chr3L_10_18645001 chr3L_18645001 RAL-382 2346 chr3L 18649593 18649657 chr3L 18650006 18650070 35 411 6.5 10.0 8.2 3.8 477 chr3L 18649593 intron MYPT-75D + chr3L 18649832 intron MYPT-75D + chr3L 18650070 intron MYPT-75D + chr3L_35_18645001 chr3L_18645001 RAL-382 2347 chr3L 18665170 18665232 chr3L 18665305 18665368 16 136 13.0 0.0 6.5 2.1 198 chr3L 18665170 intron MYPT-75D + chr3L 18665269 intron MYPT-75D + chr3L 18665368 intron MYPT-75D + chr3L_16_18665001 chr3L_18665001 RAL-382 2348 chr3L 18692714 18692721 chr3L 18692847 18692847 4 131 3.5 20.5 12.0 0.3 133 chr3L 18692714 intergenic not near genes chr3L 18692780 intergenic not near genes chr3L 18692847 intergenic not near genes chr3L_4_18690001 chr3L_18690001 RAL-382 2349 chr3L 18710745 18710782 chr3L 18718745 18718782 Stalker2 23 8000 13.5 6.0 9.8 2.1 8037 chr3L 18710745 intergenic not near genes chr3L 18714764 intergenic not near genes chr3L 18718782 intergenic not near genes chr3L_23_18710001 chr3L_18710001 RAL-382 2350 chr3L 18721730 18721801 chr3L 18721861 18721941 14 139 8.0 10.0 9.0 1.4 211 chr3L 18721730 intergenic CG12477 - chr3L 18721836 intergenic CG12477 - chr3L 18721941 3` UTR CG12477 - chr3L_14_18720001 chr3L_18720001 RAL-382 2351 chr3L 18730329 18730398 chr3L 18730559 18730627 17 223 4.5 7.5 6.0 2.4 298 chr3L 18730329 intergenic not near genes chr3L 18730478 intergenic not near genes chr3L 18730627 intergenic not near genes chr3L_17_18730001 chr3L_18730001 RAL-382 2352 chr3L 18741952 18741972 chr3L 18742088 18742108 7 136 15.0 8.5 11.8 0.5 156 chr3L 18741952 intergenic not near genes chr3L 18742030 intergenic not near genes chr3L 18742108 intergenic not near genes chr3L_7_18740001 chr3L_18740001 RAL-382 2353 chr3L 18753498 18753562 chr3L 18753630 18753694 37 131 11.5 8.0 9.8 3.4 196 chr3L 18753498 intron ftz-f1 - chr3L 18753596 intron ftz-f1 - chr3L 18753694 intron ftz-f1 - chr3L_37_18750001 chr3L_18750001 RAL-382 2354 chr3L 18772366 18772431 chr3L 18781097 18781147 roo 24 8730 6.0 10.0 8.0 2.7 8781 chr3L 18772366 intron ftz-f1 - chr3L 18776756 intron ftz-f1 - chr3L 18781147 intron ftz-f1 - chr3L_24_18775001 chr3L_18775001 RAL-382 2355 chr3L 18784347 18784406 chr3L 18784486 18784545 33 139 8.0 12.5 10.2 2.9 198 chr3L 18784347 intron ftz-f1 - chr3L 18784446 intron ftz-f1 - chr3L 18784545 intron ftz-f1 - chr3L_33_18780001 chr3L_18780001 RAL-382 2356 chr3L 18797281 18797337 chr3L 18797415 18797471 29 132 5.0 10.0 7.5 3.4 190 chr3L 18797281 intron ftz-f1 - chr3L 18797376 intron ftz-f1 - chr3L 18797471 intron ftz-f1 - chr3L_29_18795001 chr3L_18795001 RAL-382 2357 chr3L 18833095 18833168 chr3L 18833268 18833341 37 171 8.0 9.5 8.8 3.8 246 chr3L 18833095 intron Indy - chr3L 18833218 intron Indy - chr3L 18833341 intron Indy - chr3L_37_18830001 chr3L_18830001 RAL-382 2358 chr3L 18833802 18833814 chr3L 18834945 18834957 1360 9 1143 13.0 21.5 17.2 0.5 1155 chr3L 18833802 intron Indy - chr3L 18834380 intron Indy - chr3L 18834957 intron Indy - chr3L_9_18830001 chr3L_18830001 RAL-382 2359 chr3L 18853960 18854024 chr3L 18854111 18854175 27 151 7.0 6.5 6.8 3.5 215 chr3L 18853960 intergenic CR45387 + chr3L 18854068 intergenic CR45387 + chr3L 18854175 intergenic CR45387 + chr3L_27_18850001 chr3L_18850001 RAL-382 2360 chr3L 18924430 18924506 chr3L 18924556 18924632 29 126 11.5 8.0 9.8 2.7 202 chr3L 18924430 intron CG32204 - chr3L 18924531 intron CG32204 - chr3L 18924632 intron CG32204 - chr3L_29_18920001 chr3L_18920001 RAL-382 2361 chr3L 18929918 18929987 chr3L 18930053 18930121 19 131 7.5 10.0 8.8 1.9 203 chr3L 18929918 intron CG32204 - chr3L 18930020 intron CG32204 - chr3L 18930121 exon CG32204 - chr3L_19_18930001 chr3L_18930001 RAL-382 2362 chr3L 18933576 18933659 chr3L 18933720 18933802 25 143 7.0 3.0 5.0 4.2 226 chr3L 18933576 intron CG32204 - chr3L 18933689 intron CG32204 - chr3L 18933802 intron CG32204 - chr3L_25_18930001 chr3L_18930001 RAL-382 2363 chr3L 18972369 18972409 chr3L 18972478 18972519 5 118 6.0 7.0 6.5 0.7 150 chr3L 18972369 intergenic not near genes chr3L 18972444 intergenic not near genes chr3L 18972519 intergenic not near genes chr3L_5_18970001 chr3L_18970001 RAL-382 2364 chr3L 19008800 19008837 chr3L 19009187 19009224 jockey 14 386 18.0 12.5 15.2 0.9 424 chr3L 19008800 intron nkd - chr3L 19009012 intron nkd - chr3L 19009224 intron nkd - chr3L_14_19005001 chr3L_19005001 RAL-382 2365 chr3L 19008839 19008869 chr3L 19009176 19009246 jockey 12 366 9.5 7.5 8.5 1.3 407 chr3L 19008839 intron nkd - chr3L 19009042 intron nkd - chr3L 19009246 intron nkd - chr3L_12_19005001 chr3L_19005001 RAL-382 2366 chr3L 19015128 19015212 chr3L 19015261 19015342 26 132 6.0 9.0 7.5 3.1 214 chr3L 19015128 intron nkd - chr3L 19015235 intron nkd - chr3L 19015342 intron nkd - chr3L_26_19015001 chr3L_19015001 RAL-382 2367 chr3L 19026803 19026821 chr3L 19026933 19026951 7 129 10.5 12.5 11.5 0.6 148 chr3L 19026803 intron nkd - chr3L 19026877 intron nkd - chr3L 19026951 intron nkd - chr3L_7_19025001 chr3L_19025001 RAL-382 2368 chr3L 19081987 19082059 chr3L 19082139 19082170 24 150 7.0 7.5 7.2 2.9 183 chr3L 19081987 intron Mkp3 - chr3L 19082078 intron Mkp3 - chr3L 19082170 intron Mkp3 - chr3L_24_19080001 chr3L_19080001 RAL-382 2369 chr3L 19101677 19101741 chr3L 19102099 19102161 24 420 2.0 14.5 8.2 2.6 484 chr3L 19101677 intergenic not near genes chr3L 19101919 intergenic not near genes chr3L 19102161 intergenic not near genes chr3L_24_19100001 chr3L_19100001 RAL-382 2370 chr3L 19111316 19111361 chr3L 19111453 19111498 20 135 9.0 13.0 11.0 1.7 182 chr3L 19111316 intron CG14082 - chr3L 19111407 intron CG14082 - chr3L 19111498 intron CG14082 - chr3L_20_19110001 chr3L_19110001 RAL-382 2371 chr3L 19115601 19115606 chr3L 19115829 19115834 BS 4 228 21.5 9.5 15.5 0.2 233 chr3L 19115601 intron CG14082 - chr3L 19115718 intron CG14082 - chr3L 19115834 intron CG14082 - chr3L_4_19115001 chr3L_19115001 RAL-382 2372 chr3L 19115608 19115665 chr3L 19115826 19115893 BS 19 224 9.5 8.0 8.8 1.9 285 chr3L 19115608 intron CG14082 - chr3L 19115750 intron CG14082 - chr3L 19115893 intron CG14082 - chr3L_19_19115001 chr3L_19115001 RAL-382 2373 chr3L 19116999 19117070 chr3L 19124491 19124563 mdg1 25 7493 8.0 7.0 7.5 2.9 7564 chr3L 19116999 intron CG14082 - chr3L 19120781 intron CG14082 - chr3L 19124563 intron CG14082 - chr3L_25_19120001 chr3L_19120001 RAL-382 2374 chr3L 19182340 19182413 chr3L 19182471 19182538 27 129 12.5 7.0 9.8 2.5 198 chr3L 19182340 intron fz2 - chr3L 19182439 intron fz2 - chr3L 19182538 intron fz2 - chr3L_27_19180001 chr3L_19180001 RAL-382 2375 chr3L 19186394 19186425 chr3L 19186536 19186550 4 133 5.0 8.5 6.8 0.5 156 chr3L 19186394 intron fz2 - chr3L 19186472 intron fz2 - chr3L 19186550 intron fz2 - chr3L_4_19185001 chr3L_19185001 RAL-382 2376 chr3L 19208012 19208082 chr3L 19209436 19209504 Doc 26 1419 5.5 12.0 8.8 2.7 1492 chr3L 19208012 intron fz2 - chr3L 19208758 intron fz2 - chr3L 19209504 intron fz2 - chr3L_26_19205001 chr3L_19205001 RAL-382 2377 chr3L 19220633 19220633 chr3L 22908066 22908067 5 3687434 34.0 37.5 35.8 0.1 3687434 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_5_21060001 chr3L_21060001 RAL-382 2378 chr3L 19220634 19220634 chr3L 22908066 22908067 6 3687432 33.5 37.5 35.5 0.2 3687433 chr3L 19220634 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_6_21060001 chr3L_21060001 RAL-382 2379 chr3L 19220637 19220637 chr3L 22908066 22908066 8 3687429 33.5 37.5 35.5 0.2 3687429 chr3L 19220637 intron fz2 - chr3L 21064352 intron siz + chr3L 22908066 intergenic not near genes chr3L_8_21060001 chr3L_21060001 RAL-382 2380 chr3L 19238676 19238752 chr3L 19238833 19238909 29 156 8.0 10.0 9.0 2.9 233 chr3L 19238676 intergenic not near genes chr3L 19238792 intergenic not near genes chr3L 19238909 intergenic not near genes chr3L_29_19235001 chr3L_19235001 RAL-382 2381 chr3L 19244095 19244137 chr3L 19244191 19244265 9 119 1.5 5.5 3.5 2.0 170 chr3L 19244095 intergenic not near genes chr3L 19244180 intergenic not near genes chr3L 19244265 intergenic not near genes chr3L_9_19240001 chr3L_19240001 RAL-382 2382 chr3L 19262180 19262238 chr3L 19262295 19262356 16 129 0.0 7.0 3.5 3.6 176 chr3L 19262180 3` UTR Bet1 + chr3L 19262268 3` UTR,3` UTR Bet1 +,Max - chr3L 19262356 3` UTR,3` UTR Bet1 +,Max - chr3L_16_19260001 chr3L_19260001 RAL-382 2383 chr3L 19269773 19269845 chr3L 19270027 19270099 29 251 6.0 7.5 6.8 3.7 326 chr3L 19269773 intron,exon CG14085 +,CG14088 - chr3L 19269936 intron,exon CG14085 +,CG14088 - chr3L 19270099 intron,exon CG14085 +,CG14088 - chr3L_29_19265001 chr3L_19265001 RAL-382 2384 chr3L 19279636 19279680 chr3L 19279773 19279822 12 132 11.0 9.0 10.0 1.1 186 chr3L 19279636 intron CG14086 + chr3L 19279729 exon CG14086 + chr3L 19279822 exon CG14086 + chr3L_12_19275001 chr3L_19275001 RAL-382 2385 chr3L 19279688 19279698 chr3L 19279765 19279840 4 120 8.5 9.0 8.8 0.4 152 chr3L 19279688 intron CG14086 + chr3L 19279764 exon CG14086 + chr3L 19279840 3` UTR CG14086 + chr3L_4_19275001 chr3L_19275001 RAL-382 2386 chr3L 19319589 19319635 chr3L 19319716 19319761 10 126 6.0 13.0 9.5 1.0 172 chr3L 19319589 intron pip - chr3L 19319675 intron pip - chr3L 19319761 intron pip - chr3L_10_19315001 chr3L_19315001 RAL-382 2387 chr3L 19342710 19342777 chr3L 19342851 19342918 23 141 10.0 4.5 7.2 2.8 208 chr3L 19342710 3` UTR CG32206 - chr3L 19342814 3` UTR CG32206 - chr3L 19342918 3` UTR CG32206 - chr3L_23_19340001 chr3L_19340001 RAL-382 2388 chr3L 19387564 19387640 chr3L 19387957 19388012 29 390 6.0 6.5 6.2 4.0 448 chr3L 19387564 intron CG32206 - chr3L 19387788 intron,intron CG32206 -,ms(3)76Ba + chr3L 19388012 intron,exon CG32206 -,ms(3)76Ba + chr3L_29_19385001 chr3L_19385001 RAL-382 2389 chr3L 19398891 19398932 chr3L 19403656 19403699 F-element 19 4766 4.0 4.0 4.0 3.8 4808 chr3L 19398891 intron CG32206 - chr3L 19401295 intron CG32206 - chr3L 19403699 intron CG32206 - chr3L_19_19400001 chr3L_19400001 RAL-382 2390 chr3L 19404933 19404999 chr3L 19405060 19405126 33 127 6.5 14.5 10.5 2.9 193 chr3L 19404933 intron CG32206 - chr3L 19405030 intron CG32206 - chr3L 19405126 intron CG32206 - chr3L_33_19405001 chr3L_19405001 RAL-382 2391 chr3L 19410323 19410347 chr3L 19410449 19410463 9 123 17.0 13.0 15.0 0.6 140 chr3L 19410323 intron CG32206 - chr3L 19410393 intron CG32206 - chr3L 19410463 intron CG32206 - chr3L_9_19410001 chr3L_19410001 RAL-382 2392 chr3L 19410350 19410398 chr3L 19410447 19410523 18 117 8.5 13.0 10.8 1.5 173 chr3L 19410350 intron CG32206 - chr3L 19410436 intron CG32206 - chr3L 19410523 intron CG32206 - chr3L_18_19410001 chr3L_19410001 RAL-382 2393 chr3L 19488476 19488499 chr3L 19488608 19488631 8 132 7.0 16.0 11.5 0.6 155 chr3L 19488476 intergenic pncr009:3L -,CG32212 + chr3L 19488554 intergenic pncr009:3L -,CG32212 + chr3L 19488631 intergenic pncr009:3L -,CG32212 + chr3L_8_19485001 chr3L_19485001 RAL-382 2394 chr3L 19510686 19510703 chr3L 19510906 19510986 8 272 0.0 6.0 3.0 2.0 300 chr3L 19510686 intergenic not near genes chr3L 19510836 intergenic not near genes chr3L 19510986 intergenic not near genes chr3L_8_19510001 chr3L_19510001 RAL-382 2395 chr3L 19567534 19567538 chr3L 19567666 19567670 4 132 26.5 11.0 18.8 0.2 136 chr3L 19567534 3` UTR Shal - chr3L 19567602 3` UTR Shal - chr3L 19567670 3` UTR Shal - chr3L_4_19565001 chr3L_19565001 RAL-382 2396 chr3L 19567540 19567597 chr3L 19567655 19567729 30 131 8.5 8.0 8.2 3.3 189 chr3L 19567540 3` UTR Shal - chr3L 19567634 3` UTR Shal - chr3L 19567729 3` UTR Shal - chr3L_30_19565001 chr3L_19565001 RAL-382 2397 chr3L 19605565 19605574 chr3L 19605703 19605712 5 138 13.0 28.5 20.8 0.2 147 chr3L 19605565 intron lush - chr3L 19605638 intron lush - chr3L 19605712 intron lush - chr3L_5_19605001 chr3L_19605001 RAL-382 2398 chr3L 19636823 19636826 chr3L 19636975 19636978 5 152 27.5 26.0 26.8 0.2 155 chr3L 19636823 intergenic CG8786 - chr3L 19636900 intergenic CG8786 - chr3L 19636978 intergenic CG8786 - chr3L_5_19635001 chr3L_19635001 RAL-382 2399 chr3L 19636827 19636845 chr3L 19636971 19636989 13 151 22.5 25.0 23.8 0.5 162 chr3L 19636827 intergenic CG8786 - chr3L 19636908 intergenic CG8786 - chr3L 19636989 intergenic CG8786 - chr3L_13_19635001 chr3L_19635001 RAL-382 2400 chr3L 19820251 19820319 chr3L 19827850 19827918 412 40 7598 6.5 8.0 7.2 4.9 7667 chr3L 19820251 intron Deaf1 + chr3L 19824084 intron Deaf1 + chr3L 19827918 intron Deaf1 + chr3L_40_19820001 chr3L_19820001 RAL-382 2401 chr3L 19848463 19848531 chr3L 19857703 19857705 roo 28 9232 14.0 8.5 11.2 2.3 9242 chr3L 19848463 intron Papss + chr3L 19853084 intron Papss + chr3L 19857705 intron Papss + chr3L_28_19850001 chr3L_19850001 RAL-382 2402 chr3L 19861779 19861819 chr3L 19863617 19863656 S-element 12 1838 13.0 5.0 9.0 1.2 1877 chr3L 19861779 5` UTR CR45433 + chr3L 19862718 intergenic not near genes chr3L 19863656 intergenic not near genes chr3L_12_19860001 chr3L_19860001 RAL-382 2403 chr3L 19861826 19861845 chr3L 19863612 19863683 S-element 7 1826 8.0 4.0 6.0 1.0 1857 chr3L 19861826 5` UTR CR45433 + chr3L 19862754 intergenic not near genes chr3L 19863683 intergenic not near genes chr3L_7_19860001 chr3L_19860001 RAL-382 2404 chr3L 19899851 19899913 chr3L 19899998 19900060 34 147 5.5 16.5 11.0 2.8 209 chr3L 19899851 intron,intron Mi-2 -,Su(Tpl) - chr3L 19899956 intron,intron Mi-2 -,Su(Tpl) - chr3L 19900060 intron,intron Mi-2 -,Su(Tpl) - chr3L_34_19895001 chr3L_19895001 RAL-382 2405 chr3L 19905131 19905194 chr3L 19905510 19905573 33 378 10.0 0.0 5.0 5.5 442 chr3L 19905131 intron,intron Mi-2 -,Su(Tpl) - chr3L 19905352 intron,intron Mi-2 -,Su(Tpl) - chr3L 19905573 intron,intron Mi-2 -,Su(Tpl) - chr3L_33_19905001 chr3L_19905001 RAL-382 2406 chr3L 19933487 19933558 chr3L 19934359 19934430 23 872 3.5 6.0 4.8 4.0 943 chr3L 19933487 intergenic CR45678 + chr3L 19933958 5` UTR CR45678 + chr3L 19934430 intergenic CR45678 + chr3L_23_19930001 chr3L_19930001 RAL-382 2407 chr3L 19981158 19981230 chr3L 19981288 19981360 37 130 10.0 7.0 8.5 3.9 202 chr3L 19981158 intergenic not near genes chr3L 19981259 intergenic CG17732 + chr3L 19981360 intergenic CG17732 + chr3L_37_19980001 chr3L_19980001 RAL-382 2408 chr3L 19986353 19986376 chr3L 19986483 19986506 7 130 14.0 8.0 11.0 0.6 153 chr3L 19986353 exon schuy + chr3L 19986430 exon schuy + chr3L 19986506 exon schuy + chr3L_7_19985001 chr3L_19985001 RAL-382 2409 chr3L 19986379 19986412 chr3L 19986473 19986513 9 122 8.5 5.5 7.0 1.1 134 chr3L 19986379 exon schuy + chr3L 19986446 exon schuy + chr3L 19986513 exon schuy + chr3L_9_19985001 chr3L_19985001 RAL-382 2410 chr3L 20083389 20083421 chr3L 20083523 20083566 6 137 13.0 11.5 12.2 0.5 177 chr3L 20083389 intron sNPF-R - chr3L 20083478 intron sNPF-R - chr3L 20083566 intron sNPF-R - chr3L_6_20080001 chr3L_20080001 RAL-382 2411 chr3L 20096043 20096083 chr3L 20096197 20096232 8 153 12.0 0.5 6.2 1.1 189 chr3L 20096043 intergenic not near genes chr3L 20096138 intergenic not near genes chr3L 20096232 intergenic not near genes chr3L_8_20095001 chr3L_20095001 RAL-382 2412 chr3L 20113366 20113439 chr3L 20113503 20113576 35 133 11.5 5.0 8.2 3.8 210 chr3L 20113366 intergenic not near genes chr3L 20113471 intergenic not near genes chr3L 20113576 intergenic not near genes chr3L_35_20110001 chr3L_20110001 RAL-382 2413 chr3L 20113616 20113676 chr3L 20122923 20122983 roo 25 9307 12.0 9.0 10.5 2.2 9367 chr3L 20113616 intergenic not near genes chr3L 20118300 intergenic not near genes chr3L 20122983 intergenic not near genes chr3L_25_20115001 chr3L_20115001 RAL-382 2414 chr3L 20143040 20143085 chr3L 20143170 20143215 22 129 9.0 11.5 10.2 2.0 175 chr3L 20143040 intergenic not near genes chr3L 20143128 intergenic not near genes chr3L 20143215 intergenic not near genes chr3L_22_20140001 chr3L_20140001 RAL-382 2415 chr3L 20143087 20143106 chr3L 20143161 20143236 14 126 9.0 11.5 10.2 1.2 149 chr3L 20143087 intergenic not near genes chr3L 20143162 intergenic not near genes chr3L 20143236 intergenic not near genes chr3L_14_20140001 chr3L_20140001 RAL-382 2416 chr3L 20148237 20148315 chr3L 20148377 20148455 27 139 6.0 8.5 7.2 3.3 218 chr3L 20148237 intergenic not near genes chr3L 20148346 intergenic not near genes chr3L 20148455 intergenic not near genes chr3L_27_20145001 chr3L_20145001 RAL-382 2417 chr3L 20206723 20206790 chr3L 20206855 20206922 32 131 8.5 12.5 10.5 2.8 199 chr3L 20206723 intergenic not near genes chr3L 20206822 intergenic not near genes chr3L 20206922 intergenic not near genes chr3L_32_20205001 chr3L_20205001 RAL-382 2418 chr3L 20212564 20212586 chr3L 20218191 20218213 mdg3 13 5627 20.5 16.0 18.2 0.7 5649 chr3L 20212564 intergenic CG7017 - chr3L 20215388 intergenic not near genes chr3L 20218213 intergenic CG6933 - chr3L_13_20215001 chr3L_20215001 RAL-382 2419 chr3L 20257305 20257359 chr3L 20258476 20258530 pogo 15 1169 9.5 8.5 9.0 1.5 1225 chr3L 20257305 intron rdgC + chr3L 20257918 intron rdgC + chr3L 20258530 intron rdgC + chr3L_15_20255001 chr3L_20255001 RAL-382 2420 chr3L 20262749 20262799 chr3L 20262911 20262961 18 159 10.0 9.5 9.8 1.7 212 chr3L 20262749 exon rdgC + chr3L 20262855 intron rdgC + chr3L 20262961 intron rdgC + chr3L_18_20260001 chr3L_20260001 RAL-382 2421 chr3L 20262803 20262825 chr3L 20262908 20262984 6 141 7.5 8.5 8.0 0.7 181 chr3L 20262803 exon rdgC + chr3L 20262894 intron rdgC + chr3L 20262984 intron rdgC + chr3L_6_20260001 chr3L_20260001 RAL-382 2422 chr3L 20422964 20423037 chr3L 20423229 20423275 24 260 5.5 4.5 5.0 4.0 311 chr3L 20422964 exon zye + chr3L 20423120 exon zye + chr3L 20423275 exon zye + chr3L_24_20420001 chr3L_20420001 RAL-382 2423 chr3L 20444772 20444836 chr3L 20444945 20445009 34 172 11.5 6.0 8.8 3.5 237 chr3L 20444772 intron CG5910 + chr3L 20444890 intron CG5910 + chr3L 20445009 intron CG5910 + chr3L_34_20440001 chr3L_20440001 RAL-382 2424 chr3L 20447714 20447733 chr3L 20447847 20447862 11 131 13.5 20.5 17.0 0.6 148 chr3L 20447714 intron CG5910 + chr3L 20447788 intron CG5910 + chr3L 20447862 intron CG5910 + chr3L_11_20445001 chr3L_20445001 RAL-382 2425 chr3L 20462538 20462552 chr3L 20462669 20462683 10 131 38.5 0.0 19.2 0.5 145 chr3L 20462538 intron atk - chr3L 20462610 intron atk - chr3L 20462683 intron atk - chr3L_10_20460001 chr3L_20460001 RAL-382 2426 chr3L 20462558 20462568 chr3L 20462668 20462699 10 129 29.0 0.0 14.5 0.6 141 chr3L 20462558 intron atk - chr3L 20462628 intron atk - chr3L 20462699 intron atk - chr3L_10_20460001 chr3L_20460001 RAL-382 2427 chr3L 20462218 20462290 chr3L 20467431 20467503 35 5214 70.5 72.5 71.5 0.5 5285 chr3L 20462218 intron,3` UTR atk -,mag + chr3L 20464860 5` UTR,exon atk -,CG42764 - chr3L 20467503 intron CG5955 + chr3L_35_20460001 chr3L_20460001 RAL-382 2428 chr3L 20476713 20476777 chr3L 20484362 20484399 springer 26 7647 10.5 9.5 10.0 2.4 7686 chr3L 20476713 3` UTR isoQC + chr3L 20480556 intergenic not near genes chr3L 20484399 3` UTR ZnT77C - chr3L_26_20480001 chr3L_20480001 RAL-382 2429 chr3L 20487625 20487674 chr3L 20488126 20488175 INE-1 11 498 8.5 6.5 7.5 1.3 550 chr3L 20487625 intron ZnT77C - chr3L 20487900 intron ZnT77C - chr3L 20488175 exon ZnT77C - chr3L_11_20485001 chr3L_20485001 RAL-382 2430 chr3L 20525228 20525228 chr3L 22908066 22908067 6 2382838 40.0 37.5 38.8 0.2 2382839 chr3L 20525228 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_6_21715001 chr3L_21715001 RAL-382 2431 chr3L 20525228 20525228 chr3L 24821492 24821494 8 4296265 40.0 22.5 31.2 0.2 4296266 chr3L 20525228 intron CG4825 - chr3L 22673361 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_8_22670001 chr3L_22670001 RAL-382 2432 chr3L 20525229 20525229 chr3L 22908066 22908067 13 2382838 39.5 37.5 38.5 0.3 2382838 chr3L 20525229 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_13_21715001 chr3L_21715001 RAL-382 2433 chr3L 20525229 20525229 chr3L 24821492 24821494 16 4296264 39.5 22.5 31.0 0.5 4296265 chr3L 20525229 intron CG4825 - chr3L 22673362 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_16_22670001 chr3L_22670001 RAL-382 2434 chr3L 20525230 20525230 chr3L 24821493 24821494 8 4296264 39.0 22.0 30.5 0.3 4296264 chr3L 20525230 intron CG4825 - chr3L 22673362 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_8_22670001 chr3L_22670001 RAL-382 2435 chr3L 20548313 20548384 chr3L 20548452 20548523 26 139 9.0 7.0 8.0 2.9 210 chr3L 20548313 intergenic not near genes chr3L 20548418 intergenic not near genes chr3L 20548523 intergenic not near genes chr3L_26_20545001 chr3L_20545001 RAL-382 2436 chr3L 20590019 20590067 chr3L 20590608 20590638 412 13 585 10.5 8.5 9.5 1.2 619 chr3L 20590019 intergenic not near genes chr3L 20590328 intergenic not near genes chr3L 20590638 intergenic not near genes chr3L_13_20590001 chr3L_20590001 RAL-382 2437 chr3L 20590069 20590094 chr3L 20590604 20590675 412 14 566 6.0 8.0 7.0 1.8 606 chr3L 20590069 intergenic not near genes chr3L 20590372 intergenic not near genes chr3L 20590675 intergenic not near genes chr3L_14_20590001 chr3L_20590001 RAL-382 2438 chr3L 20652609 20652620 chr3L 20652739 20652750 4 130 10.0 22.5 16.2 0.2 141 chr3L 20652609 intergenic CR44685 + chr3L 20652680 intergenic CR44685 + chr3L 20652750 intergenic CR44685 + chr3L_4_20650001 chr3L_20650001 RAL-382 2439 chr3L 20680108 20680127 chr3L 20680328 20680347 5 219 14.5 7.5 11.0 0.4 239 chr3L 20680108 intergenic not near genes chr3L 20680228 intergenic not near genes chr3L 20680347 intergenic not near genes chr3L_5_20680001 chr3L_20680001 RAL-382 2440 chr3L 20680128 20680151 chr3L 20680325 20680367 9 213 7.0 7.5 7.2 1.1 239 chr3L 20680128 intergenic not near genes chr3L 20680248 intergenic not near genes chr3L 20680367 intergenic not near genes chr3L_9_20680001 chr3L_20680001 RAL-382 2441 chr3L 20680154 20680452 chr3L 20680320 20680581 17 163 10.5 6.0 8.2 1.8 427 chr3L 20680154 intergenic not near genes chr3L 20680368 intergenic not near genes chr3L 20680581 intergenic not near genes chr3L_17_20680001 chr3L_20680001 RAL-382 2442 chr3L 20680464 20680480 chr3L 20680573 20680607 8 122 8.0 15.5 11.8 0.6 143 chr3L 20680464 intergenic not near genes chr3L 20680536 intergenic not near genes chr3L 20680607 intergenic not near genes chr3L_8_20680001 chr3L_20680001 RAL-382 2443 chr3L 20685319 20685392 chr3L 20685465 20685533 17 144 7.0 7.5 7.2 2.1 214 chr3L 20685319 intergenic not near genes chr3L 20685426 intergenic not near genes chr3L 20685533 intergenic not near genes chr3L_17_20685001 chr3L_20685001 RAL-382 2444 chr3L 20710715 20710786 chr3L 20710842 20710898 22 125 10.0 5.0 7.5 2.6 183 chr3L 20710715 intergenic not near genes chr3L 20710806 intergenic not near genes chr3L 20710898 intergenic not near genes chr3L_22_20710001 chr3L_20710001 RAL-382 2445 chr3L 20715795 20715866 chr3L 20715939 20716010 29 143 6.0 7.0 6.5 3.9 215 chr3L 20715795 3` UTR cmpy - chr3L 20715902 3` UTR cmpy - chr3L 20716010 3` UTR cmpy - chr3L_29_20715001 chr3L_20715001 RAL-382 2446 chr3L 20729483 20729555 chr3L 20729628 20729704 22 147 8.0 8.5 8.2 2.4 221 chr3L 20729483 3` UTR CR43945 - chr3L 20729594 3` UTR CR43945 - chr3L 20729704 intergenic CR43945 - chr3L_22_20725001 chr3L_20725001 RAL-382 2447 chr3L 20739444 20739506 chr3L 20739609 20739671 14 165 9.0 9.0 9.0 1.4 227 chr3L 20739444 intron CG13252 + chr3L 20739558 intron CG13252 + chr3L 20739671 intron CG13252 + chr3L_14_20735001 chr3L_20735001 RAL-382 2448 chr3L 20821248 20821306 chr3L 20824767 20824772 NOF 19 3516 5.5 11.5 8.5 2.0 3524 chr3L 20821248 intron Pka-R1 + chr3L 20823010 intron Pka-R1 + chr3L 20824772 intron Pka-R1 + chr3L_19_20820001 chr3L_20820001 RAL-382 2449 chr3L 20849224 20849292 chr3L 20849353 20849408 29 128 15.0 9.5 12.2 2.2 184 chr3L 20849224 intron CG32432 - chr3L 20849316 intron CG32432 - chr3L 20849408 intron CG32432 - chr3L_29_20845001 chr3L_20845001 RAL-382 2450 chr3L 20858028 20858095 chr3L 20858177 20858244 42 148 8.5 11.0 9.8 3.9 216 chr3L 20858028 intron CG32432 - chr3L 20858136 intron CG32432 - chr3L 20858244 intron CG32432 - chr3L_42_20855001 chr3L_20855001 RAL-382 2451 chr3L 20896886 20896936 chr3L 20897006 20897066 18 128 9.0 10.5 9.8 1.7 180 chr3L 20896886 3` UTR Sfp77F - chr3L 20896976 3` UTR Sfp77F - chr3L 20897066 3` UTR Sfp77F - chr3L_18_20895001 chr3L_20895001 RAL-382 2452 chr3L 20917044 20917111 chr3L 20917170 20917238 29 126 6.5 4.5 5.5 4.5 194 chr3L 20917044 intergenic not near genes chr3L 20917141 intergenic not near genes chr3L 20917238 intergenic not near genes chr3L_29_20915001 chr3L_20915001 RAL-382 2453 chr3L 20939984 20940011 chr3L 20940120 20940147 10 136 15.5 7.0 11.2 0.8 163 chr3L 20939984 intron fng - chr3L 20940066 intron fng - chr3L 20940147 intron fng - chr3L_10_20940001 chr3L_20940001 RAL-382 2454 chr3L 20964576 20964584 chr3L 20964703 20964704 6 126 28.0 12.0 20.0 0.3 128 chr3L 20964576 3` UTR CG12983 - chr3L 20964640 3` UTR CG12983 - chr3L 20964704 3` UTR CG12983 - chr3L_6_20960001 chr3L_20960001 RAL-382 2455 chr3L 20964587 20964590 chr3L 20964698 20964704 4 120 26.0 12.5 19.2 0.2 117 chr3L 20964587 3` UTR CG12983 - chr3L 20964646 3` UTR CG12983 - chr3L 20964704 3` UTR CG12983 - chr3L_4_20960001 chr3L_20960001 RAL-382 2456 chr3L 20964597 20964639 chr3L 20964694 20964760 19 122 12.5 12.5 12.5 1.4 163 chr3L 20964597 3` UTR CG12983 - chr3L 20964678 3` UTR CG12983 - chr3L 20964760 3` UTR CG12983 - chr3L_19_20960001 chr3L_20960001 RAL-382 2457 chr3L 20984983 20985035 chr3L 20985105 20985153 17 133 7.5 9.0 8.2 1.8 170 chr3L 20984983 intergenic not near genes chr3L 20985068 intergenic not near genes chr3L 20985153 intergenic not near genes chr3L_17_20985001 chr3L_20985001 RAL-382 2458 chr3L 21010606 21010675 chr3L 21010737 21010806 36 130 12.5 12.5 12.5 2.7 200 chr3L 21010606 intron skd - chr3L 21010706 intron skd - chr3L 21010806 intron skd - chr3L_36_21010001 chr3L_21010001 RAL-382 2459 chr3L 21014888 21014948 chr3L 21023408 21023416 Tirant 16 8511 5.0 9.0 7.0 2.0 8528 chr3L 21014888 intron skd - chr3L 21019152 intron skd - chr3L 21023416 intron skd - chr3L_16_21015001 chr3L_21015001 RAL-382 2460 chr3L 21035412 21035472 chr3L 21035539 21035599 38 126 7.5 0.0 3.8 7.9 187 chr3L 21035412 intron siz + chr3L 21035506 intron siz + chr3L 21035599 intron siz + chr3L_38_21035001 chr3L_21035001 RAL-382 2461 chr3L 21070824 21070860 chr3L 21070931 21070934 11 98 5.5 6.0 5.8 1.6 110 chr3L 21070824 exon siz + chr3L 21070879 exon siz + chr3L 21070934 exon siz + chr3L_11_21070001 chr3L_21070001 RAL-382 2462 chr3L 21082161 21082237 chr3L 21082289 21082335 26 124 6.0 10.0 8.0 2.9 174 chr3L 21082161 intron ko - chr3L 21082248 intron ko - chr3L 21082335 intron ko - chr3L_26_21080001 chr3L_21080001 RAL-382 2463 chr3L 21145264 21145290 chr3L 21145394 21145420 10 130 21.0 11.0 16.0 0.6 156 chr3L 21145264 intron Ac78C - chr3L 21145342 intron Ac78C - chr3L 21145420 intron Ac78C - chr3L_10_21145001 chr3L_21145001 RAL-382 2464 chr3L 21150884 21150958 chr3L 21151070 21151139 34 185 6.0 12.0 9.0 3.4 255 chr3L 21150884 intron Ac78C - chr3L 21151012 intron Ac78C - chr3L 21151139 intron Ac78C - chr3L_34_21150001 chr3L_21150001 RAL-382 2465 chr3L 21151822 21151882 chr3L 21156956 21157016 flea 24 5132 7.0 9.0 8.0 2.7 5194 chr3L 21151822 intron Ac78C - chr3L 21154419 intron Ac78C - chr3L 21157016 intron Ac78C - chr3L_24_21150001 chr3L_21150001 RAL-382 2466 chr3L 21160920 21160939 chr3L 21161066 21161085 6 145 14.5 8.0 11.2 0.5 165 chr3L 21160920 5` UTR Ac78C - chr3L 21161002 5` UTR Ac78C - chr3L 21161085 intron Ac78C - chr3L_6_21160001 chr3L_21160001 RAL-382 2467 chr3L 21160944 21160986 chr3L 21161062 21161132 21 139 8.0 8.0 8.0 2.3 188 chr3L 21160944 5` UTR Ac78C - chr3L 21161038 intron Ac78C - chr3L 21161132 intron Ac78C - chr3L_21_21160001 chr3L_21160001 RAL-382 2468 chr3L 21161720 21161735 chr3L 21161850 21161865 6 127 7.5 22.0 14.8 0.4 145 chr3L 21161720 intron Ac78C - chr3L 21161792 intron Ac78C - chr3L 21161865 intron Ac78C - chr3L_6_21160001 chr3L_21160001 RAL-382 2469 chr3L 21170014 21170086 chr3L 21170290 21170362 25 272 5.0 7.0 6.0 3.6 348 chr3L 21170014 intron Ac78C - chr3L 21170188 intron Ac78C - chr3L 21170362 intron Ac78C - chr3L_25_21170001 chr3L_21170001 RAL-382 2470 chr3L 21243727 21243751 chr3L 21251310 21251315 412 6 7579 8.5 9.5 9.0 0.6 7588 chr3L 21243727 intron Eip78C + chr3L 21247521 intron Eip78C + chr3L 21251315 intron Eip78C + chr3L_6_21245001 chr3L_21245001 RAL-382 2471 chr3L 21274161 21274192 chr3L 21274382 21274413 12 221 19.0 6.0 12.5 0.9 252 chr3L 21274161 intron AcCoAS - chr3L 21274287 intron AcCoAS - chr3L 21274413 intron AcCoAS - chr3L_12_21270001 chr3L_21270001 RAL-382 2472 chr3L 21274194 21274230 chr3L 21274380 21274451 16 217 10.5 6.0 8.2 1.7 257 chr3L 21274194 intron AcCoAS - chr3L 21274322 intron AcCoAS - chr3L 21274451 intron AcCoAS - chr3L_16_21270001 chr3L_21270001 RAL-382 2473 chr3L 21306106 21306164 chr3L 21315315 21315373 roo 20 9207 9.0 12.5 10.8 1.7 9267 chr3L 21306106 3` UTR CG7632 + chr3L 21310740 intron Pc - chr3L 21315373 3` UTR Pc - chr3L_20_21310001 chr3L_21310001 RAL-382 2474 chr3L 21319483 21319553 chr3L 21319623 21319693 28 139 9.5 8.5 9.0 2.8 210 chr3L 21319483 5` UTR Rab26 + chr3L 21319588 5` UTR Rab26 + chr3L 21319693 5` UTR Rab26 + chr3L_28_21315001 chr3L_21315001 RAL-382 2475 chr3L 21372679 21372699 chr3L 21379237 21379257 McClintock 12 6558 20.5 10.5 15.5 0.7 6578 chr3L 21372679 intergenic not near genes chr3L 21375968 intergenic not near genes chr3L 21379257 intergenic not near genes chr3L_12_21375001 chr3L_21375001 RAL-382 2476 chr3L 21372704 21372749 chr3L 21379227 21379306 McClintock 9 6553 8.5 7.5 8.0 1.0 6602 chr3L 21372704 intergenic not near genes chr3L 21376005 intergenic not near genes chr3L 21379306 intergenic not near genes chr3L_9_21375001 chr3L_21375001 RAL-382 2477 chr3L 21415086 21415163 chr3L 21415218 21415296 25 131 8.0 4.5 6.2 3.5 210 chr3L 21415086 intron rgn + chr3L 21415191 intron rgn + chr3L 21415296 intron rgn + chr3L_25_21415001 chr3L_21415001 RAL-382 2478 chr3L 4341332 4341332 chr3L 21448027 21448027 6 17106695 43.5 37.0 40.2 0.1 17106695 chr3L 4341332 intron Cip4 - chr3L 12894680 3` UTR CG14118 + chr3L 21448027 3` UTR Syx7 + chr3L_6_12890001 chr3L_12890001 RAL-382 2479 chr3L 21498833 21498854 chr3L 21500483 21500532 1360 13 1682 11.5 11.0 11.2 1.1 1699 chr3L 21498833 intron Glg1 - chr3L 21499682 intron Glg1 - chr3L 21500532 intron Glg1 - chr3L_13_21495001 chr3L_21495001 RAL-382 2480 chr3L 21749282 21749317 chr3L 21754481 21754515 Doc 6 5199 12.0 6.5 9.2 0.6 5233 chr3L 21749282 intron Syn1 - chr3L 21751898 intron Syn1 - chr3L 21754515 intron Syn1 - chr3L_6_21750001 chr3L_21750001 RAL-382 2481 chr3L 21749320 21749330 chr3L 21754480 21754517 Doc 7 5189 11.0 6.5 8.8 0.7 5197 chr3L 21749320 intron Syn1 - chr3L 21751918 intron Syn1 - chr3L 21754517 intron Syn1 - chr3L_7_21750001 chr3L_21750001 RAL-382 2482 chr3L 21769004 21769073 chr3L 21769141 21769210 32 137 12.5 6.0 9.2 3.1 206 chr3L 21769004 intron,intron Syn1 -,CG42689 + chr3L 21769107 intron,intron Syn1 -,CG42689 + chr3L 21769210 intron,intron Syn1 -,CG42689 + chr3L_32_21765001 chr3L_21765001 RAL-382 2483 chr3L 21769992 21770039 chr3L 21770129 21770176 15 132 10.0 6.5 8.2 1.6 184 chr3L 21769992 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L 21770084 5` UTR,intron,intron Syn1 -,CG42689 +,CG7370 + chr3L 21770176 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L_15_21770001 chr3L_21770001 RAL-382 2484 chr3L 21776625 21776689 chr3L 21776758 21776826 17 135 7.0 6.5 6.8 2.2 201 chr3L 21776625 intron,intron CG42689 +,CG42552 + chr3L 21776726 intron,intron CG42689 +,CG42552 + chr3L 21776826 exon,intron CG42689 +,CG42552 + chr3L_17_21775001 chr3L_21775001 RAL-382 2485 chr3L 21809935 21809967 chr3L 21810065 21810088 11 133 20.0 10.0 15.0 0.7 153 chr3L 21809935 intron eg + chr3L 21810012 intron eg + chr3L 21810088 intron eg + chr3L_11_21810001 chr3L_21810001 RAL-382 2486 chr3L 21836683 21836751 chr3L 21836819 21836887 32 134 12.5 11.0 11.8 2.5 204 chr3L 21836683 3` UTR,3` UTR Nopp140 +,P5CDh1 - chr3L 21836785 3` UTR P5CDh1 - chr3L 21836887 3` UTR P5CDh1 - chr3L_32_21835001 chr3L_21835001 RAL-382 2487 chr3L 21849462 21849474 chr3L 21849594 21849606 5 132 12.0 12.0 12.0 0.4 144 chr3L 21849462 intron mub + chr3L 21849534 intron mub + chr3L 21849606 intron mub + chr3L_5_21845001 chr3L_21845001 RAL-382 2488 chr3L 21849480 21849527 chr3L 21849588 21849659 20 129 5.5 10.5 8.0 2.2 179 chr3L 21849480 intron mub + chr3L 21849570 intron mub + chr3L 21849659 intron mub + chr3L_20_21845001 chr3L_21845001 RAL-382 2489 chr3L 21852209 21852283 chr3L 21852352 21852426 36 134 8.0 6.0 7.0 4.5 217 chr3L 21852209 intron mub + chr3L 21852318 intron mub + chr3L 21852426 intron mub + chr3L_36_21850001 chr3L_21850001 RAL-382 2490 chr3L 21874950 21875026 chr3L 21875157 21875233 39 207 8.5 14.0 11.2 3.2 283 chr3L 21874950 intron mub + chr3L 21875092 intron mub + chr3L 21875233 intron mub + chr3L_39_21875001 chr3L_21875001 RAL-382 2491 chr3L 21900983 21901038 chr3L 21901121 21901181 23 138 2.5 7.5 5.0 3.8 198 chr3L 21900983 intron mub + chr3L 21901082 intron mub + chr3L 21901181 intron mub + chr3L_23_21900001 chr3L_21900001 RAL-382 2492 chr3L 21952402 21952481 chr3L 21953195 21953243 transib1 40 785 10.0 7.5 8.8 4.1 841 chr3L 21952402 intergenic not near genes chr3L 21952822 intergenic not near genes chr3L 21953243 intergenic not near genes chr3L_40_21950001 chr3L_21950001 RAL-382 2493 chr3L 22016323 22016394 chr3L 22016489 22016523 27 162 7.0 6.5 6.8 3.5 200 chr3L 22016323 intergenic not near genes chr3L 22016423 intergenic not near genes chr3L 22016523 intergenic not near genes chr3L_27_22015001 chr3L_22015001 RAL-382 2494 chr3L 22033645 22033662 chr3L 22033773 22033790 10 126 15.0 7.5 11.2 0.8 145 chr3L 22033645 intergenic not near genes chr3L 22033718 intergenic not near genes chr3L 22033790 intergenic not near genes chr3L_10_22030001 chr3L_22030001 RAL-382 2495 chr3L 22033665 22033719 chr3L 22033768 22033847 24 127 6.0 9.0 7.5 2.8 182 chr3L 22033665 intergenic not near genes chr3L 22033756 intergenic not near genes chr3L 22033847 intergenic not near genes chr3L_24_22030001 chr3L_22030001 RAL-382 2496 chr3L 22046135 22046190 chr3L 22046288 22046343 29 152 10.0 6.0 8.0 3.2 208 chr3L 22046135 intron Oct-TyrR + chr3L 22046239 intron Oct-TyrR + chr3L 22046343 intron Oct-TyrR + chr3L_29_22045001 chr3L_22045001 RAL-382 2497 chr3L 22046194 22046206 chr3L 22046286 22046359 8 140 7.5 5.5 6.5 1.1 165 chr3L 22046194 intron Oct-TyrR + chr3L 22046276 intron Oct-TyrR + chr3L 22046359 intron Oct-TyrR + chr3L_8_22045001 chr3L_22045001 RAL-382 2498 chr3L 22099635 22099697 chr3L 22105871 22105933 3S18 25 6236 9.0 12.5 10.8 2.1 6298 chr3L 22099635 intergenic not near genes chr3L 22102784 intergenic not near genes chr3L 22105933 intergenic not near genes chr3L_25_22100001 chr3L_22100001 RAL-382 2499 chr3L 22124901 22124977 chr3L 22125107 22125124 32 201 5.0 8.0 6.5 4.3 223 chr3L 22124901 intergenic not near genes chr3L 22125012 intergenic not near genes chr3L 22125124 intergenic not near genes chr3L_32_22125001 chr3L_22125001 RAL-382 2500 chr3L 22130451 22130523 chr3L 22130647 22130718 20 192 9.0 4.0 6.5 2.7 267 chr3L 22130451 intergenic not near genes chr3L 22130584 intergenic not near genes chr3L 22130718 intergenic not near genes chr3L_20_22130001 chr3L_22130001 RAL-382 2501 chr3L 22169986 22170053 chr3L 22170163 22170227 17 160 5.0 8.5 6.8 2.2 241 chr3L 22169986 intron olf413 + chr3L 22170106 intron olf413 + chr3L 22170227 intron olf413 + chr3L_17_22170001 chr3L_22170001 RAL-382 2502 chr3L 22361892 22361971 chr3L 22362019 22362098 31 126 8.0 10.5 9.2 3.0 206 chr3L 22361892 intron Ten-m - chr3L 22361995 intron Ten-m - chr3L 22362098 intron Ten-m - chr3L_31_22360001 chr3L_22360001 RAL-382 2503 chr3L 22395558 22395629 chr3L 22395691 22395716 28 129 6.0 11.5 8.8 2.9 158 chr3L 22395558 intron Ten-m - chr3L 22395637 intron Ten-m - chr3L 22395716 intron Ten-m - chr3L_28_22395001 chr3L_22395001 RAL-382 2504 chr3L 22411351 22411399 chr3L 22411453 22411520 8 117 7.5 6.0 6.8 1.0 169 chr3L 22411351 intergenic not near genes chr3L 22411436 intergenic not near genes chr3L 22411520 intergenic not near genes chr3L_8_22410001 chr3L_22410001 RAL-382 2505 chr3L 22431686 22431710 chr3L 22432294 22432295 7 610 10.5 3.0 6.8 0.9 609 chr3L 22431686 intergenic not near genes chr3L 22431990 intergenic not near genes chr3L 22432295 intergenic not near genes chr3L_7_22430001 chr3L_22430001 RAL-382 2506 chr3L 22522652 22522728 chr3L 22522779 22522840 33 126 10.5 4.0 7.2 4.0 188 chr3L 22522652 intergenic not near genes chr3L 22522746 intergenic not near genes chr3L 22522840 intergenic not near genes chr3L_33_22520001 chr3L_22520001 RAL-382 2507 chr3L 22555722 22555794 chr3L 22563242 22563286 blood 17 7517 8.0 5.0 6.5 2.3 7564 chr3L 22555722 intergenic not near genes chr3L 22559504 intergenic not near genes chr3L 22563286 intergenic not near genes chr3L_17_22555001 chr3L_22555001 RAL-382 2508 chr3L 22577579 22577641 chr3L 22582417 22582479 Doc 20 4836 6.0 4.0 5.0 3.3 4900 chr3L 22577579 intergenic not near genes chr3L 22580029 intergenic not near genes chr3L 22582479 3` UTR CG14459 - chr3L_20_22580001 chr3L_22580001 RAL-382 2509 chr3L 22587169 22587242 chr3L 22587316 22587387 39 146 12.0 9.5 10.8 3.3 218 chr3L 22587169 intron CG14459 - chr3L 22587278 intron CG14459 - chr3L 22587387 intron CG14459 - chr3L_39_22585001 chr3L_22585001 RAL-382 2510 chr3L 22617144 22617215 chr3L 22624646 22624717 blood 30 7501 5.5 8.5 7.0 3.8 7573 chr3L 22617144 intron CG14459 - chr3L 22620930 intron CG14459 - chr3L 22624717 intron CG14459 - chr3L_30_22620001 chr3L_22620001 RAL-382 2511 chr3L 22659011 22659016 chr3L 22659139 22659144 5 128 20.0 7.5 13.8 0.3 133 chr3L 22659011 intergenic not near genes chr3L 22659078 intergenic not near genes chr3L 22659144 intergenic not near genes chr3L_5_22655001 chr3L_22655001 RAL-382 2512 chr3L 22659027 22659086 chr3L 22659137 22659179 16 118 9.5 7.5 8.5 1.7 152 chr3L 22659027 intergenic not near genes chr3L 22659103 intergenic not near genes chr3L 22659179 intergenic not near genes chr3L_16_22655001 chr3L_22655001 RAL-382 2513 chr3L 22797293 22797357 chr3L 22797436 22797500 24 140 9.5 8.0 8.8 2.4 207 chr3L 22797293 3` UTR jim - chr3L 22797396 3` UTR jim - chr3L 22797500 3` UTR jim - chr3L_24_22795001 chr3L_22795001 RAL-382 2514 chr3L 22853420 22853436 chr3L 22853556 22853573 6 137 14.5 7.5 11.0 0.5 153 chr3L 22853420 5` UTR,5` UTR CR43426 +,CG32462 - chr3L 22853496 5` UTR,5` UTR CR43426 +,CG32462 - chr3L 22853573 5` UTR CR43426 + chr3L_6_22850001 chr3L_22850001 RAL-382 2515 chr3L 22853441 22853719 chr3L 22853555 22853850 42 132 6.5 7.0 6.8 5.4 409 chr3L 22853441 5` UTR,5` UTR CR43426 +,CG32462 - chr3L 22853646 5` UTR CR43426 + chr3L 22853850 5` UTR CR43426 + chr3L_42_22850001 chr3L_22850001 RAL-382 2516 chr3L 22865941 22866002 chr3L 22867124 22867185 Doc 34 1183 11.5 11.0 11.2 2.8 1244 chr3L 22865941 exon CG33170 + chr3L 22866563 intron CG33170 + chr3L 22867185 intron CG33170 + chr3L_34_22865001 chr3L_22865001 RAL-382 2517 chr3L 19220632 19220637 chr3L 22908066 22908066 24 3687432 33.5 37.5 35.5 0.7 3687434 chr3L 19220632 intron fz2 - chr3L 21064349 intron siz + chr3L 22908066 intergenic not near genes chr3L_24_21060001 chr3L_21060001 RAL-382 2518 chr3L 20525227 20525230 chr3L 22908066 22908066 27 2382837 39.0 37.5 38.2 0.7 2382839 chr3L 20525227 intron CG4825 - chr3L 21716646 intergenic not near genes chr3L 22908066 intergenic not near genes chr3L_27_21715001 chr3L_21715001 RAL-382 2519 chr3L 22908066 22908066 chr3L 24821492 24821495 8 1913428 39.0 22.5 30.8 0.3 1913429 chr3L 22908066 intergenic not near genes chr3L 23864780 intron CG40470 - chr3L 24821495 intergenic not near genes chr3L_8_23860001 chr3L_23860001 RAL-382 2520 chr3L 9410424 9410424 chr3L 22908067 22908067 4 13497643 29.0 37.5 33.2 0.1 13497643 chr3L 9410424 intron CG4022 - chr3L 16159246 intron CG5151 - chr3L 22908067 intergenic not near genes chr3L_4_16155001 chr3L_16155001 RAL-382 2521 chr3L 19220633 19220637 chr3L 22908067 22908067 13 3687433 33.5 37.5 35.5 0.4 3687434 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_13_21060001 chr3L_21060001 RAL-382 2522 chr3L 20525228 20525230 chr3L 22908067 22908067 27 2382837 39.0 37.5 38.2 0.7 2382839 chr3L 20525228 intron CG4825 - chr3L 21716648 intergenic not near genes chr3L 22908067 intergenic not near genes chr3L_27_21715001 chr3L_21715001 RAL-382 2523 chr3L 22936693 22936763 chr3L 22938107 22938178 19 1423 58.0 55.5 56.8 0.3 1485 chr3L 22936693 intergenic not near genes chr3L 22937436 intergenic not near genes chr3L 22938178 intergenic not near genes chr3L_19_22935001 chr3L_22935001 RAL-382 2524 chr3L 22982428 22982479 chr3L 22982876 22982927 INE-1 26 447 5.5 13.5 9.5 2.5 499 chr3L 22982428 intergenic not near genes chr3L 22982678 intergenic not near genes chr3L 22982927 intergenic not near genes chr3L_26_22980001 chr3L_22980001 RAL-382 2525 chr3L 22989823 22989879 chr3L 22996847 22996903 297 25 7022 8.5 13.5 11.0 2.1 7080 chr3L 22989823 intergenic not near genes chr3L 22993363 intergenic not near genes chr3L 22996903 intergenic not near genes chr3L_25_22990001 chr3L_22990001 RAL-382 2526 chr3L 23008157 23008227 chr3L 23008281 23008345 11 119 9.0 4.0 6.5 1.5 188 chr3L 23008157 intron nrm + chr3L 23008251 intron nrm + chr3L 23008345 intron nrm + chr3L_11_23005001 chr3L_23005001 RAL-382 2527 chr3L 23042184 23042235 chr3L 23048987 23049038 gypsy6 21 6800 10.5 11.5 11.0 1.8 6854 chr3L 23042184 intergenic not near genes chr3L 23045611 intergenic not near genes chr3L 23049038 intergenic not near genes chr3L_21_23045001 chr3L_23045001 RAL-382 2528 chr3L 23042239 23042249 chr3L 23048986 23049052 gypsy6 8 6779 7.0 11.5 9.2 0.8 6813 chr3L 23042239 intergenic not near genes chr3L 23045646 intergenic not near genes chr3L 23049052 intergenic not near genes chr3L_8_23045001 chr3L_23045001 RAL-382 2529 chr3L 23101249 23101316 chr3L 23101503 23101567 15 260 7.0 8.0 7.5 1.8 318 chr3L 23101249 intron CkIIalpha + chr3L 23101408 intron CkIIalpha + chr3L 23101567 intron CkIIalpha + chr3L_15_23100001 chr3L_23100001 RAL-382 2530 chr3L 23165869 23165906 chr3L 23173362 23173397 Quasimodo 12 7492 16.0 9.0 12.5 0.9 7528 chr3L 23165869 intergenic not near genes chr3L 23169633 intergenic not near genes chr3L 23173397 intergenic not near genes chr3L_12_23165001 chr3L_23165001 RAL-382 2531 chr3L 23182218 23182292 chr3L 23182382 23182456 24 161 9.5 8.5 9.0 2.4 238 chr3L 23182218 intron CG34031 + chr3L 23182337 intron CG34031 + chr3L 23182456 intron CG34031 + chr3L_24_23180001 chr3L_23180001 RAL-382 2532 chr3L 23205401 23205445 chr3L 23205681 23205725 16 276 15.5 7.5 11.5 1.3 324 chr3L 23205401 intergenic not near genes chr3L 23205563 intergenic not near genes chr3L 23205725 intergenic not near genes chr3L_16_23205001 chr3L_23205001 RAL-382 2533 chr3L 23239764 23239812 chr3L 23240304 23240352 17 540 4.0 4.0 4.0 3.4 588 chr3L 23239764 intron nAChRalpha4 + chr3L 23240058 intron nAChRalpha4 + chr3L 23240352 intron nAChRalpha4 + chr3L_17_23240001 chr3L_23240001 RAL-382 2534 chr3L 23402260 23402312 chr3L 23402387 23402445 15 130 6.5 8.0 7.2 1.8 185 chr3L 23402260 intergenic not near genes chr3L 23402352 intergenic not near genes chr3L 23402445 intergenic not near genes chr3L_15_23400001 chr3L_23400001 RAL-382 2535 chr3L 23772891 23772894 chr3L 23773027 23773030 4 136 17.0 6.0 11.5 0.3 139 chr3L 23772891 intergenic not near genes chr3L 23772960 intergenic not near genes chr3L 23773030 intergenic not near genes chr3L_4_23770001 chr3L_23770001 RAL-382 2536 chr3L 23823973 23824020 chr3L 23824436 23824475 17 462 9.0 5.0 7.0 2.1 502 chr3L 23823973 intergenic not near genes chr3L 23824224 intergenic not near genes chr3L 23824475 intergenic not near genes chr3L_17_23820001 chr3L_23820001 RAL-382 2537 chr3L 23875478 23875551 chr3L 23875609 23875665 23 123 9.5 9.0 9.2 2.3 187 chr3L 23875478 intron CG40470 - chr3L 23875572 intron CG40470 - chr3L 23875665 intron CG40470 - chr3L_23_23875001 chr3L_23875001 RAL-382 2538 chr3L 23941238 23941240 chr3L 26882296 26882298 1360 4 2941058 29.0 11.0 20.0 0.2 2941060 chr3L 23941238 intron CG40470 - chr3L 25411768 intergenic not near genes chr3L 26882298 intergenic not near genes chr3L_4_25410001 chr3L_25410001 RAL-382 2539 chr3L 24012371 24012431 chr3L 24020761 24020807 roo 21 8389 11.5 10.0 10.8 1.8 8436 chr3L 24012371 intergenic not near genes chr3L 24016589 intergenic not near genes chr3L 24020807 intergenic not near genes chr3L_21_24015001 chr3L_24015001 RAL-382 2540 chr3L 24168760 24168820 chr3L 24176122 24176168 ZAM 16 7356 11.5 7.0 9.2 1.6 7408 chr3L 24168760 intron Snap25 + chr3L 24172464 intron Snap25 + chr3L 24176168 intron Snap25 + chr3L_16_24170001 chr3L_24170001 RAL-382 2541 chr3L 24303938 24304004 chr3L 24304091 24304146 8 152 6.5 3.0 4.8 1.4 208 chr3L 24303938 intergenic not near genes chr3L 24304042 intergenic not near genes chr3L 24304146 intergenic not near genes chr3L_8_24300001 chr3L_24300001 RAL-382 2542 chr3L 24791855 24791867 chr3L 24796684 24796696 Doc 6 4829 20.0 6.0 13.0 0.4 4841 chr3L 24791855 intergenic not near genes chr3L 24794276 intergenic not near genes chr3L 24796696 intergenic not near genes chr3L_6_24790001 chr3L_24790001 RAL-382 2543 chr3L 24791870 24791886 chr3L 24796678 24796715 Doc 5 4825 15.5 5.0 10.2 0.4 4845 chr3L 24791870 intergenic not near genes chr3L 24794292 intergenic not near genes chr3L 24796715 intergenic not near genes chr3L_5_24790001 chr3L_24790001 RAL-382 2544 chr3L 18198930 18198930 chr3L 24821492 24821492 11 6622562 36.0 22.5 29.2 0.4 6622562 chr3L 18198930 intergenic not near genes chr3L 21510211 intron M6 + chr3L 24821492 intergenic not near genes chr3L_11_21510001 chr3L_21510001 RAL-382 2545 chr3L 20525228 20525230 chr3L 24821492 24821492 14 4296263 39.0 22.5 30.8 0.4 4296264 chr3L 20525228 intron CG4825 - chr3L 22673360 intron CG14457 + chr3L 24821492 intergenic not near genes chr3L_14_22670001 chr3L_22670001 RAL-382 2546 chr3L 18198931 18198931 chr3L 24821493 24821493 8 6622562 35.5 22.0 28.8 0.3 6622562 chr3L 18198931 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821493 intergenic not near genes chr3L_8_21510001 chr3L_21510001 RAL-382 2547 chr3L 20525228 20525230 chr3L 24821493 24821493 7 4296264 39.0 22.0 30.5 0.2 4296265 chr3L 20525228 intron CG4825 - chr3L 22673360 intron CG14457 + chr3L 24821493 intergenic not near genes chr3L_7_22670001 chr3L_22670001 RAL-382 2548 chr3L 20525228 20525229 chr3L 24821494 24821494 6 4296265 39.5 22.0 30.8 0.2 4296266 chr3L 20525228 intron CG4825 - chr3L 22673361 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_6_22670001 chr3L_22670001 RAL-382 2549 chr3L 25331594 25331631 chr3L 25331735 25331771 5 136 4.5 3.0 3.8 1.0 177 chr3L 25331594 intergenic not near genes chr3L 25331682 intergenic not near genes chr3L 25331771 intergenic not near genes chr3L_5_25330001 chr3L_25330001 RAL-382 2550 chr3L 25502157 25502224 chr3L 25502310 25502377 7 153 32.0 26.0 29.0 0.2 220 chr3L 25502157 intron CG41343 - chr3L 25502267 intron CG41343 - chr3L 25502377 intron CG41343 - chr3L_7_25500001 chr3L_25500001 RAL-382 2551 chr3L 26008820 26008858 chr3L 26008960 26008998 11 140 18.5 8.0 13.2 0.8 178 chr3L 26008820 intron CG40178 - chr3L 26008909 intron CG40178 - chr3L 26008998 intron CG40178 - chr3L_11_26005001 chr3L_26005001 RAL-382 2552 chr3L 26026704 26026746 chr3L 26026811 26026863 5 104 17.5 21.5 19.5 0.2 159 chr3L 26026704 intergenic not near genes chr3L 26026784 intergenic not near genes chr3L 26026863 intergenic not near genes chr3L_5_26025001 chr3L_26025001 RAL-382 2553 chr3L 26704490 26704526 chr3L 26709845 26709881 Transpac 5 5350 6.5 7.5 7.0 0.6 5391 chr3L 26704490 intergenic not near genes chr3L 26707186 intergenic not near genes chr3L 26709881 intergenic not near genes chr3L_5_26705001 chr3L_26705001 RAL-382 2554 chr3L 23941237 23941241 chr3L 26882296 26882300 1360 8 2941059 29.0 11.0 20.0 0.4 2941063 chr3L 23941237 intron CG40470 - chr3L 25411768 intergenic not near genes chr3L 26882300 intergenic not near genes chr3L_8_25410001 chr3L_25410001 RAL-382 2555 chr3L 27390677 27390707 chr3L 27390782 27390784 13 118 29.0 40.0 34.5 0.4 107 chr3L 27390677 intron Dbp80 + chr3L 27390730 intron Dbp80 + chr3L 27390784 intron Dbp80 + chr3L_13_27390001 chr3L_27390001 RAL-382 2556 chr3R 2534090 2534159 chr3R 2541709 2541778 13 7615 20.5 21.5 21.0 0.6 7688 chr3R 2534090 intergenic not near genes chr3R 2537934 intergenic not near genes chr3R 2541778 intergenic not near genes chr3R_13_2535001 chr3R_2535001 RAL-382 2557 chr3R 2556883 2556953 chr3R 2557572 2557636 16 684 39.5 35.5 37.5 0.4 753 chr3R 2556883 intron CG41056 - chr3R 2557260 intron CG41056 - chr3R 2557636 intron CG41056 - chr3R_16_2555001 chr3R_2555001 RAL-382 2558 chr3R 2862182 2862201 chr3R 2862308 2862327 4 126 30.5 24.5 27.5 0.1 145 chr3R 2862182 intergenic not near genes chr3R 2862254 intergenic not near genes chr3R 2862327 intergenic not near genes chr3R_4_2860001 chr3R_2860001 RAL-382 2559 chr3R 4063760 4063823 chr3R 4069090 4069100 11 5318 12.0 32.0 22.0 0.5 5340 chr3R 4063760 intergenic not near genes chr3R 4066430 intergenic not near genes chr3R 4069100 intergenic not near genes chr3R_11_4065001 chr3R_4065001 RAL-382 2560 chr3R 4105001 4105057 chr3R 4110255 4110311 copia 12 5254 10.5 6.0 8.2 1.3 5310 chr3R 4105001 intergenic not near genes chr3R 4107656 intergenic not near genes chr3R 4110311 intergenic not near genes chr3R_12_4105001 chr3R_4105001 RAL-382 2561 chr3R 4206034 4206097 chr3R 4211659 4211722 mdg3 33 5624 13.0 7.0 10.0 3.0 5688 chr3R 4206034 intron CG14636 - chr3R 4208878 intron CG14636 - chr3R 4211722 intron CG14636 - chr3R_33_4205001 chr3R_4205001 RAL-382 2562 chr3R 4366714 4366729 chr3R 4375147 4375162 roo 11 8432 26.5 14.5 20.5 0.5 8448 chr3R 4366714 3` UTR CG1090 + chr3R 4370938 intergenic not near genes chr3R 4375162 5` UTR CR44922 + chr3R_11_4370001 chr3R_4370001 RAL-382 2563 chr3R 4366731 4366790 chr3R 4375138 4375196 roo 21 8430 8.0 9.5 8.8 2.1 8465 chr3R 4366731 3` UTR CG1090 + chr3R 4370964 intergenic not near genes chr3R 4375196 5` UTR CR44922 + chr3R_21_4370001 chr3R_4370001 RAL-382 2564 chr3R 4376518 4376574 chr3R 4377017 4377073 35 499 7.5 10.5 9.0 3.5 555 chr3R 4376518 5` UTR CR44922 + chr3R 4376796 5` UTR CR44922 + chr3R 4377073 5` UTR CR44922 + chr3R_35_4375001 chr3R_4375001 RAL-382 2565 chr3R 4408380 4408429 chr3R 4412724 4412783 Juan 24 4350 12.5 9.5 11.0 2.0 4403 chr3R 4408380 intron CG32944 - chr3R 4410582 intron CG32944 - chr3R 4412783 intron CG32944 - chr3R_24_4410001 chr3R_4410001 RAL-382 2566 chr3R 4501929 4502005 chr3R 4502057 4502123 37 128 9.0 7.0 8.0 4.1 194 chr3R 4501929 intron CG34357 - chr3R 4502026 intron CG34357 - chr3R 4502123 intron CG34357 - chr3R_37_4500001 chr3R_4500001 RAL-382 2567 chr3R 4593423 4593494 chr3R 4593555 4593592 14 126 7.5 7.5 7.5 1.6 169 chr3R 4593423 intergenic not near genes chr3R 4593508 intergenic not near genes chr3R 4593592 intergenic not near genes chr3R_14_4590001 chr3R_4590001 RAL-382 2568 chr3R 4609505 4609514 chr3R 4610718 4610728 1360 4 1214 20.5 9.0 14.8 0.3 1223 chr3R 4609505 intergenic not near genes chr3R 4610116 intergenic not near genes chr3R 4610728 intergenic not near genes chr3R_4_4610001 chr3R_4610001 RAL-382 2569 chr3R 4609522 4609571 chr3R 4610713 4610785 1360 18 1213 9.5 7.0 8.2 2.0 1263 chr3R 4609522 intergenic not near genes chr3R 4610154 intergenic not near genes chr3R 4610785 intergenic not near genes chr3R_18_4610001 chr3R_4610001 RAL-382 2570 chr3R 4636560 4636627 chr3R 4637020 4637097 INE-1 35 469 11.0 7.0 9.0 3.5 537 chr3R 4636560 intergenic not near genes chr3R 4636828 intergenic not near genes chr3R 4637097 intergenic not near genes chr3R_35_4635001 chr3R_4635001 RAL-382 2571 chr3R 4661443 4661451 chr3R 4661571 4661579 4 128 20.5 0.5 10.5 0.3 136 chr3R 4661443 intron CG43427 + chr3R 4661511 intron CG43427 + chr3R 4661579 intron CG43427 + chr3R_4_4660001 chr3R_4660001 RAL-382 2572 chr3R 4683136 4683187 chr3R 4684945 4684995 S-element 13 1807 14.0 6.5 10.2 1.2 1859 chr3R 4683136 intron CG43427 + chr3R 4684066 intron CG43427 + chr3R 4684995 intron CG43427 + chr3R_13_4680001 chr3R_4680001 RAL-382 2573 chr3R 4683188 4683201 chr3R 4684937 4685010 S-element 6 1792 12.0 4.5 8.2 0.7 1822 chr3R 4683188 intron CG43427 + chr3R 4684099 intron CG43427 + chr3R 4685010 intron CG43427 + chr3R_6_4680001 chr3R_4680001 RAL-382 2574 chr3R 4753196 4753261 chr3R 4757549 4757614 F-element 20 4351 11.5 9.0 10.2 1.8 4418 chr3R 4753196 intron,intron atms +,CG44098 - chr3R 4755405 intron,intron atms +,CG44098 - chr3R 4757614 intron,exon atms +,CG44098 - chr3R_20_4755001 chr3R_4755001 RAL-382 2575 chr3R 4769139 4769186 chr3R 4769239 4769314 23 126 7.5 10.5 9.0 2.3 175 chr3R 4769139 intron,intron atms +,CG44098 - chr3R 4769226 intron,intron atms +,CG44098 - chr3R 4769314 intron,intron atms +,CG44098 - chr3R_23_4765001 chr3R_4765001 RAL-382 2576 chr3R 4784531 4784586 chr3R 4791386 4791412 11 6832 40.5 32.5 36.5 0.3 6881 chr3R 4784531 exon CG17387 - chr3R 4787972 exon ctrip - chr3R 4791412 exon ctrip - chr3R_11_4785001 chr3R_4785001 RAL-382 2577 chr3R 4802073 4802081 chr3R 4802290 4802298 6 216 21.5 9.5 15.5 0.4 225 chr3R 4802073 intron ctrip - chr3R 4802186 intron ctrip - chr3R 4802298 intron ctrip - chr3R_6_4800001 chr3R_4800001 RAL-382 2578 chr3R 4887439 4887450 chr3R 4894866 4894877 rover 4 7426 17.0 8.5 12.8 0.3 7438 chr3R 4887439 intergenic not near genes chr3R 4891158 intergenic not near genes chr3R 4894877 intergenic not near genes chr3R_4_4890001 chr3R_4890001 RAL-382 2579 chr3R 4887452 4887501 chr3R 4894864 4894928 rover 11 7424 8.5 8.0 8.2 1.2 7476 chr3R 4887452 intergenic not near genes chr3R 4891190 intergenic not near genes chr3R 4894928 intergenic not near genes chr3R_11_4890001 chr3R_4890001 RAL-382 2580 chr3R 4922292 4922362 chr3R 4922421 4922491 17 127 3.5 4.5 4.0 3.4 199 chr3R 4922292 intron Cdep + chr3R 4922392 intron Cdep + chr3R 4922491 intron Cdep + chr3R_17_4920001 chr3R_4920001 RAL-382 2581 chr3R 4948332 4948391 chr3R 4949004 4949063 20 672 53.0 16.0 34.5 0.6 731 chr3R 4948332 intergenic snRNA:U1:82Eb -,UbcD6 - chr3R 4948698 intergenic UbcD6 - chr3R 4949063 3` UTR UbcD6 - chr3R_20_4945001 chr3R_4945001 RAL-382 2582 chr3R 4965964 4966032 chr3R 4966105 4966174 29 141 4.0 6.5 5.2 4.7 210 chr3R 4965964 intron CG1124 + chr3R 4966069 intron CG1124 + chr3R 4966174 intron CG1124 + chr3R_29_4965001 chr3R_4965001 RAL-382 2583 chr3R 4981379 4981441 chr3R 4981489 4981555 12 112 6.0 7.5 6.8 1.5 176 chr3R 4981379 intergenic not near genes chr3R 4981467 intergenic not near genes chr3R 4981555 intergenic CG14662 - chr3R_12_4980001 chr3R_4980001 RAL-382 2584 chr3R 5045798 5045871 chr3R 5052950 5053023 HMS-Beagle 37 7152 7.5 11.5 9.5 3.5 7225 chr3R 5045798 3` UTR CR43635 - chr3R 5049410 intergenic not near genes chr3R 5053023 intergenic CR45588 - chr3R_37_5045001 chr3R_5045001 RAL-382 2585 chr3R 5067949 5067995 chr3R 5073516 5073562 mdg3 23 5566 10.5 14.5 12.5 1.7 5613 chr3R 5067949 intergenic not near genes chr3R 5070756 intergenic not near genes chr3R 5073562 intergenic not near genes chr3R_23_5070001 chr3R_5070001 RAL-382 2586 chr3R 5191366 5191446 chr3R 5191594 5191672 23 231 53.0 60.5 56.8 0.4 306 chr3R 5191366 intron cno - chr3R 5191519 intron cno - chr3R 5191672 intron cno - chr3R_23_5190001 chr3R_5190001 RAL-382 2587 chr3R 5205101 5205136 chr3R 5205243 5205278 18 140 14.0 8.0 11.0 1.5 177 chr3R 5205101 intron cno - chr3R 5205190 intron cno - chr3R 5205278 intron cno - chr3R_18_5205001 chr3R_5205001 RAL-382 2588 chr3R 5278044 5278059 chr3R 5278174 5278190 8 131 25.5 15.0 20.2 0.4 146 chr3R 5278044 intron mtd - chr3R 5278117 intron mtd - chr3R 5278190 intron mtd - chr3R_8_5275001 chr3R_5275001 RAL-382 2589 chr3R 5278062 5278114 chr3R 5278172 5278245 30 123 11.0 14.5 12.8 2.2 183 chr3R 5278062 intron mtd - chr3R 5278154 intron mtd - chr3R 5278245 intron mtd - chr3R_30_5275001 chr3R_5275001 RAL-382 2590 chr3R 5282947 5282989 chr3R 5283072 5283124 12 124 11.0 12.0 11.5 1.0 177 chr3R 5282947 intron mtd - chr3R 5283036 intron mtd - chr3R 5283124 intron mtd - chr3R_12_5280001 chr3R_5280001 RAL-382 2591 chr3R 5338359 5338389 chr3R 5343586 5343616 Rt1c 10 5224 18.0 14.0 16.0 0.6 5257 chr3R 5338359 intron mtd - chr3R 5340988 intron mtd - chr3R 5343616 intron mtd - chr3R_10_5340001 chr3R_5340001 RAL-382 2592 chr3R 5338391 5338416 chr3R 5343574 5343643 Rt1c 16 5220 12.0 10.5 11.2 1.3 5252 chr3R 5338391 intron mtd - chr3R 5341017 intron mtd - chr3R 5343643 intron mtd - chr3R_16_5340001 chr3R_5340001 RAL-382 2593 chr3R 5365289 5365346 chr3R 5367007 5367064 NOF 31 1718 15.0 6.5 10.8 2.6 1775 chr3R 5365289 intron Cerk - chr3R 5366176 intron Cerk - chr3R 5367064 intron Cerk - chr3R_31_5365001 chr3R_5365001 RAL-382 2594 chr3R 5367120 5367170 chr3R 5367279 5367346 21 173 8.5 11.5 10.0 1.9 226 chr3R 5367120 intron Cerk - chr3R 5367233 intron Cerk - chr3R 5367346 intron Cerk - chr3R_21_5365001 chr3R_5365001 RAL-382 2595 chr3R 5385927 5385939 chr3R 5386148 5386160 5 221 14.5 12.5 13.5 0.3 233 chr3R 5385927 intron kkv - chr3R 5386044 intron kkv - chr3R 5386160 intron kkv - chr3R_5_5385001 chr3R_5385001 RAL-382 2596 chr3R 5385940 5385994 chr3R 5386144 5386178 26 214 8.5 12.0 10.2 2.3 238 chr3R 5385940 intron kkv - chr3R 5386059 intron kkv - chr3R 5386178 intron kkv - chr3R_26_5385001 chr3R_5385001 RAL-382 2597 chr3R 5438741 5438811 chr3R 5438960 5439010 32 218 8.0 12.5 10.2 2.9 269 chr3R 5438741 intron CG14669 + chr3R 5438876 intron CG14669 + chr3R 5439010 intron CG14669 + chr3R_32_5435001 chr3R_5435001 RAL-382 2598 chr3R 5445919 5445992 chr3R 5452428 5452502 Burdock 37 6509 8.0 11.5 9.8 3.4 6583 chr3R 5445919 intron CG14669 + chr3R 5449210 intron CG14669 + chr3R 5452502 intron CG14669 + chr3R_37_5445001 chr3R_5445001 RAL-382 2599 chr3R 5712040 5712112 chr3R 5712178 5712230 29 136 7.5 12.0 9.8 2.7 190 chr3R 5712040 3` UTR plx + chr3R 5712135 3` UTR plx + chr3R 5712230 3` UTR plx + chr3R_29_5710001 chr3R_5710001 RAL-382 2600 chr3R 5745974 5746033 chr3R 5746265 5746323 pogo 22 289 9.0 10.5 9.8 2.0 349 chr3R 5745974 3` UTR Madm + chr3R 5746148 3` UTR Madm + chr3R 5746323 3` UTR Madm + chr3R_22_5745001 chr3R_5745001 RAL-382 2601 chr3R 5746973 5747034 chr3R 5753214 5753275 diver 38 6241 12.0 12.0 12.0 2.9 6302 chr3R 5746973 intergenic Madm + chr3R 5750124 intergenic not near genes chr3R 5753275 intergenic CG2091 - chr3R_38_5750001 chr3R_5750001 RAL-382 2602 chr3R 5772325 5772404 chr3R 5772533 5772612 27 207 7.0 5.0 6.0 3.9 287 chr3R 5772325 intron CG2082 - chr3R 5772468 intron CG2082 - chr3R 5772612 intron CG2082 - chr3R_27_5770001 chr3R_5770001 RAL-382 2603 chr3R 5809069 5809142 chr3R 5809360 5809421 pogo 39 291 10.5 10.5 10.5 3.4 352 chr3R 5809069 3` UTR CG11000 + chr3R 5809245 3` UTR CG11000 + chr3R 5809421 3` UTR CG11000 + chr3R_39_5805001 chr3R_5805001 RAL-382 2604 chr3R 5822346 5822402 chr3R 5823563 5823619 1360 25 1216 11.0 14.5 12.8 1.8 1273 chr3R 5822346 3` UTR CG2023 - chr3R 5822982 3` UTR CG2023 - chr3R 5823619 3` UTR CG2023 - chr3R_25_5820001 chr3R_5820001 RAL-382 2605 chr3R 5836155 5836177 chr3R 5836309 5836331 8 154 22.0 23.5 22.8 0.3 176 chr3R 5836155 exon,3` UTR CG1208 +,CR45192 - chr3R 5836243 intron CG1208 + chr3R 5836331 intron CG1208 + chr3R_8_5835001 chr3R_5835001 RAL-382 2606 chr3R 5846846 5846887 chr3R 5846972 5847013 18 125 12.5 8.0 10.2 1.6 167 chr3R 5846846 intergenic CG1213 +,CG14676 + chr3R 5846930 intergenic CG14676 +,CG1213 + chr3R 5847013 intergenic CG14676 +,CG1213 + chr3R_18_5845001 chr3R_5845001 RAL-382 2607 chr3R 5846888 5846900 chr3R 5846969 5847026 4 115 9.0 7.5 8.2 0.4 138 chr3R 5846888 intergenic CG1213 +,CG14676 + chr3R 5846957 intergenic CG14676 +,CG1213 + chr3R 5847026 intergenic CG14676 +,CG1213 + chr3R_4_5845001 chr3R_5845001 RAL-382 2608 chr3R 5880742 5880808 chr3R 5881138 5881204 36 394 8.0 13.5 10.8 3.1 462 chr3R 5880742 intron CG34113 - chr3R 5880973 intron CG34113 - chr3R 5881204 intron CG34113 - chr3R_36_5880001 chr3R_5880001 RAL-382 2609 chr3R 5895907 5895979 chr3R 5896168 5896243 12 246 1.5 7.0 4.2 2.3 336 chr3R 5895907 intron CG34113 - chr3R 5896075 intron CG34113 - chr3R 5896243 intron CG34113 - chr3R_12_5895001 chr3R_5895001 RAL-382 2610 chr3R 5896936 5896995 chr3R 5897325 5897403 22 403 3.0 4.5 3.8 4.6 467 chr3R 5896936 intron CG34113 - chr3R 5897170 intron CG34113 - chr3R 5897403 intron CG34113 - chr3R_22_5895001 chr3R_5895001 RAL-382 2611 chr3R 5927534 5927582 chr3R 5927808 5927851 pogo 25 285 8.5 11.0 9.8 2.3 317 chr3R 5927534 intron CG34113 - chr3R 5927692 intron CG34113 - chr3R 5927851 intron CG34113 - chr3R_25_5925001 chr3R_5925001 RAL-382 2612 chr3R 5931421 5931452 chr3R 5931559 5931580 7 134 2.5 9.0 5.8 1.0 159 chr3R 5931421 intron CG34113 - chr3R 5931500 intron CG34113 - chr3R 5931580 intron CG34113 - chr3R_7_5930001 chr3R_5930001 RAL-382 2613 chr3R 5935310 5935379 chr3R 5935437 5935505 19 126 7.5 6.5 7.0 2.4 195 chr3R 5935310 intron CG34113 - chr3R 5935408 intron CG34113 - chr3R 5935505 intron CG34113 - chr3R_19_5935001 chr3R_5935001 RAL-382 2614 chr3R 5943354 5943409 chr3R 5943483 5943538 23 128 3.0 6.0 4.5 4.2 184 chr3R 5943354 intron CG34113 - chr3R 5943446 intron CG34113 - chr3R 5943538 intron CG34113 - chr3R_23_5940001 chr3R_5940001 RAL-382 2615 chr3R 5988865 5988868 chr3R 5989116 5989119 4 251 21.5 3.5 12.5 0.3 254 chr3R 5988865 intergenic CR44927 + chr3R 5988992 intergenic CR44927 + chr3R 5989119 intergenic CR44927 + chr3R_4_5985001 chr3R_5985001 RAL-382 2616 chr3R 5988873 5988927 chr3R 5989108 5989172 16 250 7.5 3.0 5.2 2.6 299 chr3R 5988873 intergenic CR44927 + chr3R 5989022 intergenic CR44927 + chr3R 5989172 intergenic CR44927 + chr3R_16_5985001 chr3R_5985001 RAL-382 2617 chr3R 6013384 6013454 chr3R 6013513 6013583 26 129 9.5 7.5 8.5 2.7 199 chr3R 6013384 intergenic not near genes chr3R 6013484 intergenic not near genes chr3R 6013583 intergenic not near genes chr3R_26_6010001 chr3R_6010001 RAL-382 2618 chr3R 6015916 6015985 chr3R 6024447 6024474 Tirant 9 8522 9.0 3.5 6.2 1.2 8558 chr3R 6015916 intergenic not near genes chr3R 6020195 intergenic not near genes chr3R 6024474 intergenic not near genes chr3R_9_6020001 chr3R_6020001 RAL-382 2619 chr3R 6029914 6029940 chr3R 6030165 6030192 6 251 17.0 7.0 12.0 0.5 278 chr3R 6029914 intergenic not near genes chr3R 6030053 intergenic not near genes chr3R 6030192 intergenic not near genes chr3R_6_6030001 chr3R_6030001 RAL-382 2620 chr3R 6029949 6029983 chr3R 6030162 6030234 5 243 8.0 6.5 7.2 0.6 285 chr3R 6029949 intergenic not near genes chr3R 6030092 intergenic not near genes chr3R 6030234 intergenic not near genes chr3R_5_6030001 chr3R_6030001 RAL-382 2621 chr3R 6104311 6104374 chr3R 6104483 6104546 32 171 12.0 6.5 9.2 3.1 235 chr3R 6104311 intron CR44929 - chr3R 6104428 intron CR44929 - chr3R 6104546 intron CR44929 - chr3R_32_6100001 chr3R_6100001 RAL-382 2622 chr3R 6121135 6121177 chr3R 6121370 6121445 BS 17 256 2.5 7.5 5.0 2.8 310 chr3R 6121135 intergenic not near genes chr3R 6121290 intergenic not near genes chr3R 6121445 intergenic not near genes chr3R_17_6120001 chr3R_6120001 RAL-382 2623 chr3R 6158477 6158533 chr3R 6167098 6167108 Tirant 18 8619 10.0 6.0 8.0 2.0 8631 chr3R 6158477 intergenic not near genes chr3R 6162792 intergenic not near genes chr3R 6167108 intergenic CG1077 + chr3R_18_6160001 chr3R_6160001 RAL-382 2624 chr3R 6175129 6175201 chr3R 6182451 6182493 HMS-Beagle2 27 7320 7.5 9.0 8.2 2.9 7364 chr3R 6175129 intergenic Osi1 + chr3R 6178811 intron CR45194 + chr3R 6182493 intergenic CR45194 + chr3R_27_6175001 chr3R_6175001 RAL-382 2625 chr3R 6194901 6194969 chr3R 6195031 6195090 23 126 8.5 6.5 7.5 2.7 189 chr3R 6194901 3` UTR NPFR + chr3R 6194996 3` UTR NPFR + chr3R 6195090 3` UTR NPFR + chr3R_23_6190001 chr3R_6190001 RAL-382 2626 chr3R 6199224 6199287 chr3R 6200999 6201062 19 1780 67.0 57.5 62.2 0.3 1838 chr3R 6199224 5` UTR Osi24 + chr3R 6200143 intron Osi24 + chr3R 6201062 intron Osi24 + chr3R_19_6200001 chr3R_6200001 RAL-382 2627 chr3R 6415173 6415250 chr3R 6415319 6415396 31 141 6.5 5.0 5.8 4.6 223 chr3R 6415173 intron gpp + chr3R 6415284 intron gpp + chr3R 6415396 intron gpp + chr3R_31_6415001 chr3R_6415001 RAL-382 2628 chr3R 6461546 6461601 chr3R 6461676 6461731 24 130 7.5 13.5 10.5 2.1 185 chr3R 6461546 intergenic not near genes chr3R 6461638 intergenic not near genes chr3R 6461731 intergenic not near genes chr3R_24_6460001 chr3R_6460001 RAL-382 2629 chr3R 6509987 6510044 chr3R 6515118 6515175 jockey 26 5130 16.0 13.5 14.8 1.6 5188 chr3R 6509987 intergenic not near genes chr3R 6512581 intergenic not near genes chr3R 6515175 intergenic not near genes chr3R_26_6510001 chr3R_6510001 RAL-382 2630 chr3R 6519072 6519087 chr3R 6519230 6519245 7 157 14.0 10.0 12.0 0.5 173 chr3R 6519072 intergenic not near genes chr3R 6519158 intergenic not near genes chr3R 6519245 intergenic not near genes chr3R_7_6515001 chr3R_6515001 RAL-382 2631 chr3R 6519091 6519143 chr3R 6519227 6519304 18 160 4.5 9.0 6.8 2.3 213 chr3R 6519091 intergenic not near genes chr3R 6519198 intergenic not near genes chr3R 6519304 intergenic not near genes chr3R_18_6515001 chr3R_6515001 RAL-382 2632 chr3R 6538178 6538221 chr3R 6538301 6538347 5 130 6.5 3.5 5.0 0.8 169 chr3R 6538178 intron dpr11 - chr3R 6538262 intron dpr11 - chr3R 6538347 exon dpr11 - chr3R_5_6535001 chr3R_6535001 RAL-382 2633 chr3R 6550281 6550352 chr3R 6550410 6550483 21 128 8.0 5.5 6.8 2.7 202 chr3R 6550281 intron dpr11 - chr3R 6550382 intron dpr11 - chr3R 6550483 intron dpr11 - chr3R_21_6550001 chr3R_6550001 RAL-382 2634 chr3R 6551074 6551133 chr3R 6551218 6551277 30 142 8.0 13.0 10.5 2.6 203 chr3R 6551074 intron dpr11 - chr3R 6551176 intron dpr11 - chr3R 6551277 intron dpr11 - chr3R_30_6550001 chr3R_6550001 RAL-382 2635 chr3R 6561908 6561970 chr3R 6562042 6562104 26 133 6.0 12.0 9.0 2.6 196 chr3R 6561908 intron dpr11 - chr3R 6562006 intron dpr11 - chr3R 6562104 intron dpr11 - chr3R_26_6560001 chr3R_6560001 RAL-382 2636 chr3R 6639862 6639933 chr3R 6639990 6640065 15 124 8.0 2.5 5.2 2.4 203 chr3R 6639862 intergenic not near genes chr3R 6639964 intergenic not near genes chr3R 6640065 intergenic not near genes chr3R_15_6635001 chr3R_6635001 RAL-382 2637 chr3R 6655333 6655367 chr3R 6657316 6657378 10 1977 32.0 48.5 40.2 0.2 2045 chr3R 6655333 exon Taf1 + chr3R 6656356 3` UTR CG1307 - chr3R 6657378 5` UTR CG1307 - chr3R_10_6655001 chr3R_6655001 RAL-382 2638 chr3R 6697965 6698031 chr3R 6698094 6698160 33 128 14.5 11.5 13.0 2.4 195 chr3R 6697965 intergenic not near genes chr3R 6698062 intergenic not near genes chr3R 6698160 intergenic not near genes chr3R_33_6695001 chr3R_6695001 RAL-382 2639 chr3R 6737454 6737482 chr3R 6739291 6739310 Doc 4 1833 15.0 10.5 12.8 0.3 1856 chr3R 6737454 intron pb - chr3R 6738382 intron pb - chr3R 6739310 intron pb - chr3R_4_6735001 chr3R_6735001 RAL-382 2640 chr3R 6737490 6737520 chr3R 6739284 6739316 Doc 6 1823 7.5 7.5 7.5 0.7 1826 chr3R 6737490 intron pb - chr3R 6738403 intron pb - chr3R 6739316 intron pb - chr3R_6_6735001 chr3R_6735001 RAL-382 2641 chr3R 6743105 6743154 chr3R 6743238 6743287 27 133 11.0 12.0 11.5 2.2 182 chr3R 6743105 intergenic zen2 - chr3R 6743196 3` UTR zen2 - chr3R 6743287 exon zen2 - chr3R_27_6740001 chr3R_6740001 RAL-382 2642 chr3R 6773507 6773584 chr3R 6773646 6773723 19 131 5.0 9.5 7.2 2.3 216 chr3R 6773507 intron CR42721 + chr3R 6773615 intron CR42721 + chr3R 6773723 intron CR42721 + chr3R_19_6770001 chr3R_6770001 RAL-382 2643 chr3R 6782398 6782459 chr3R 6782527 6782588 31 125 12.5 11.5 12.0 2.4 190 chr3R 6782398 intergenic not near genes chr3R 6782493 intergenic not near genes chr3R 6782588 intergenic not near genes chr3R_31_6780001 chr3R_6780001 RAL-382 2644 chr3R 6803700 6803748 chr3R 6803831 6803874 9 133 1.5 8.5 5.0 1.5 174 chr3R 6803700 intergenic not near genes chr3R 6803787 intergenic not near genes chr3R 6803874 intergenic not near genes chr3R_9_6800001 chr3R_6800001 RAL-382 2645 chr3R 6807218 6807285 chr3R 6807350 6807417 38 132 14.5 12.5 13.5 2.6 199 chr3R 6807218 intergenic not near genes chr3R 6807318 intergenic not near genes chr3R 6807417 intergenic not near genes chr3R_38_6805001 chr3R_6805001 RAL-382 2646 chr3R 6827974 6828038 chr3R 6828100 6828164 25 124 10.0 8.0 9.0 2.5 190 chr3R 6827974 intron Scr - chr3R 6828069 intron Scr - chr3R 6828164 intron Scr - chr3R_25_6825001 chr3R_6825001 RAL-382 2647 chr3R 6856335 6856399 chr3R 6856502 6856566 28 167 8.5 10.5 9.5 2.7 231 chr3R 6856335 intergenic not near genes chr3R 6856450 intergenic not near genes chr3R 6856566 intergenic not near genes chr3R_28_6855001 chr3R_6855001 RAL-382 2648 chr3R 6862174 6862243 chr3R 6862311 6862360 26 135 6.5 11.0 8.8 2.7 186 chr3R 6862174 intergenic not near genes chr3R 6862267 intergenic not near genes chr3R 6862360 intergenic not near genes chr3R_26_6860001 chr3R_6860001 RAL-382 2649 chr3R 6891255 6891271 chr3R 6891356 6891362 5 110 4.0 15.0 9.5 0.5 107 chr3R 6891255 intergenic not near genes chr3R 6891308 intergenic not near genes chr3R 6891362 intergenic not near genes chr3R_5_6890001 chr3R_6890001 RAL-382 2650 chr3R 6900698 6900718 chr3R 6900825 6900845 7 126 21.5 9.5 15.5 0.4 147 chr3R 6900698 intron Antp - chr3R 6900772 intron Antp - chr3R 6900845 intron Antp - chr3R_7_6900001 chr3R_6900001 RAL-382 2651 chr3R 6912054 6912133 chr3R 6912215 6912294 28 161 9.5 3.5 6.5 3.7 240 chr3R 6912054 intron Antp - chr3R 6912174 intron Antp - chr3R 6912294 intron Antp - chr3R_28_6910001 chr3R_6910001 RAL-382 2652 chr3R 6923542 6923551 chr3R 6923679 6923688 8 137 10.0 7.5 8.8 0.8 146 chr3R 6923542 intron Antp - chr3R 6923615 intron Antp - chr3R 6923688 intron Antp - chr3R_8_6920001 chr3R_6920001 RAL-382 2653 chr3R 6923554 6923613 chr3R 6923676 6923748 9 133 3.0 7.5 5.2 1.5 194 chr3R 6923554 intron Antp - chr3R 6923651 intron Antp - chr3R 6923748 intron Antp - chr3R_9_6920001 chr3R_6920001 RAL-382 2654 chr3R 6961146 6961188 chr3R 6961275 6961317 13 126 5.5 13.0 9.2 1.3 171 chr3R 6961146 intron Antp - chr3R 6961232 intron Antp - chr3R 6961317 intron Antp - chr3R_13_6960001 chr3R_6960001 RAL-382 2655 chr3R 7012171 7012180 chr3R 7012291 7012308 5 126 16.5 7.0 11.8 0.4 137 chr3R 7012171 intergenic not near genes chr3R 7012240 intergenic not near genes chr3R 7012308 intergenic not near genes chr3R_5_7010001 chr3R_7010001 RAL-382 2656 chr3R 7012182 7012230 chr3R 7012290 7012328 15 121 7.0 7.0 7.0 1.9 146 chr3R 7012182 intergenic not near genes chr3R 7012255 intergenic not near genes chr3R 7012328 intergenic not near genes chr3R_15_7010001 chr3R_7010001 RAL-382 2657 chr3R 7060212 7060273 chr3R 7060343 7060388 17 129 12.5 1.5 7.0 2.1 176 chr3R 7060212 3` UTR dj + chr3R 7060300 3` UTR dj + chr3R 7060388 3` UTR dj + chr3R_17_7060001 chr3R_7060001 RAL-382 2658 chr3R 7103283 7103312 chr3R 7103374 7103412 5 102 12.5 5.5 9.0 0.5 129 chr3R 7103283 intron Alh - chr3R 7103348 intron Alh - chr3R 7103412 intron Alh - chr3R_5_7100001 chr3R_7100001 RAL-382 2659 chr3R 7121708 7121739 chr3R 7121847 7121856 6 131 6.5 13.5 10.0 0.5 148 chr3R 7121708 exon Alh - chr3R 7121782 intron Alh - chr3R 7121856 intron Alh - chr3R_6_7120001 chr3R_7120001 RAL-382 2660 chr3R 7173629 7173674 chr3R 7173759 7173804 25 130 14.5 7.5 11.0 2.1 175 chr3R 7173629 intron sas + chr3R 7173716 intron sas + chr3R 7173804 intron sas + chr3R_25_7170001 chr3R_7170001 RAL-382 2661 chr3R 7187690 7187732 chr3R 7187828 7187870 20 138 7.5 11.0 9.2 2.0 180 chr3R 7187690 intron lap + chr3R 7187780 intron lap + chr3R 7187870 intron lap + chr3R_20_7185001 chr3R_7185001 RAL-382 2662 chr3R 7210544 7210614 chr3R 7210671 7210750 17 129 0.0 6.0 3.0 4.2 206 chr3R 7210544 intergenic not near genes chr3R 7210647 intergenic not near genes chr3R 7210750 intergenic not near genes chr3R_17_7210001 chr3R_7210001 RAL-382 2663 chr3R 7281005 7281073 chr3R 7281147 7281215 28 141 7.5 7.0 7.2 3.4 210 chr3R 7281005 intron rn - chr3R 7281110 intron rn - chr3R 7281215 intron rn - chr3R_28_7280001 chr3R_7280001 RAL-382 2664 chr3R 7312212 7312294 chr3R 7312339 7312346 9 113 5.0 7.0 6.0 1.3 134 chr3R 7312212 intergenic CR44334 - chr3R 7312279 intergenic CR44334 - chr3R 7312346 3` UTR CR44334 - chr3R_9_7310001 chr3R_7310001 RAL-382 2665 chr3R 7319767 7319784 chr3R 7319877 7319915 6 128 7.0 16.0 11.5 0.5 148 chr3R 7319767 intergenic not near genes chr3R 7319841 intergenic not near genes chr3R 7319915 intergenic not near genes chr3R_6_7315001 chr3R_7315001 RAL-382 2666 chr3R 7320393 7320450 chr3R 7320526 7320588 24 137 3.5 13.5 8.5 2.5 195 chr3R 7320393 intergenic not near genes chr3R 7320490 intergenic not near genes chr3R 7320588 intergenic not near genes chr3R_24_7320001 chr3R_7320001 RAL-382 2667 chr3R 7447945 7448007 chr3R 7448073 7448135 31 127 13.5 13.0 13.2 2.2 190 chr3R 7447945 intergenic not near genes chr3R 7448040 intergenic not near genes chr3R 7448135 intergenic not near genes chr3R_31_7445001 chr3R_7445001 RAL-382 2668 chr3R 7552922 7552986 chr3R 7553060 7553119 33 133 9.0 10.0 9.5 3.1 197 chr3R 7552922 intergenic not near genes chr3R 7553020 intergenic not near genes chr3R 7553119 intergenic not near genes chr3R_33_7550001 chr3R_7550001 RAL-382 2669 chr3R 7564378 7564452 chr3R 7564521 7564585 45 142 6.5 15.5 11.0 3.8 207 chr3R 7564378 intergenic not near genes chr3R 7564482 intergenic not near genes chr3R 7564585 intergenic not near genes chr3R_45_7560001 chr3R_7560001 RAL-382 2670 chr3R 7574597 7574651 chr3R 7574723 7574783 18 122 3.5 12.0 7.8 2.0 186 chr3R 7574597 intron CG34127 - chr3R 7574690 intron CG34127 - chr3R 7574783 intron CG34127 - chr3R_18_7570001 chr3R_7570001 RAL-382 2671 chr3R 7580056 7580087 chr3R 7580190 7580209 4 130 9.5 6.0 7.8 0.5 153 chr3R 7580056 intron CG34127 - chr3R 7580132 intron CG34127 - chr3R 7580209 intron CG34127 - chr3R_4_7580001 chr3R_7580001 RAL-382 2672 chr3R 7621486 7621554 chr3R 7621620 7621694 15 137 4.0 5.0 4.5 2.7 208 chr3R 7621486 intron CG34127 - chr3R 7621590 intron CG34127 - chr3R 7621694 intron CG34127 - chr3R_15_7620001 chr3R_7620001 RAL-382 2673 chr3R 7652436 7652476 chr3R 7652600 7652639 10 162 9.5 12.5 11.0 0.8 203 chr3R 7652436 intergenic not near genes chr3R 7652538 intergenic not near genes chr3R 7652639 intergenic not near genes chr3R_10_7650001 chr3R_7650001 RAL-382 2674 chr3R 7694533 7694604 chr3R 7713644 7713715 invader3 35 19109 11.0 9.5 10.2 3.1 19182 chr3R 7694533 3` UTR Nlg1 + chr3R 7704124 intergenic not near genes chr3R 7713715 intergenic not near genes chr3R_35_7700001 chr3R_7700001 RAL-382 2675 chr3R 7729424 7729498 chr3R 7737412 7737416 Stalker2 36 7982 6.5 11.0 8.8 3.7 7992 chr3R 7729424 intergenic not near genes chr3R 7733420 intergenic not near genes chr3R 7737416 intergenic not near genes chr3R_36_7730001 chr3R_7730001 RAL-382 2676 chr3R 7761245 7761316 chr3R 7761371 7761407 18 120 7.5 10.5 9.0 1.8 162 chr3R 7761245 exon Sp7 + chr3R 7761326 intron Sp7 + chr3R 7761407 intron Sp7 + chr3R_18_7760001 chr3R_7760001 RAL-382 2677 chr3R 7773344 7773344 chr3R 7890529 7890536 6 117188 41.0 31.5 36.2 0.2 117192 chr3R 7773344 intergenic not near genes chr3R 7831940 intron CG34384 + chr3R 7890536 intron mRpS9 - chr3R_6_7830001 chr3R_7830001 RAL-382 2678 chr3R 7876675 7876691 chr3R 7876813 7876829 INE-1 6 137 8.5 8.5 8.5 0.6 154 chr3R 7876675 intron CG17816 - chr3R 7876752 intron CG17816 - chr3R 7876829 intron CG17816 - chr3R_6_7875001 chr3R_7875001 RAL-382 2679 chr3R 7944003 7944078 chr3R 7944225 7944250 26 216 8.0 7.0 7.5 3.1 247 chr3R 7944003 intron dsx - chr3R 7944126 intron dsx - chr3R 7944250 intron dsx - chr3R_26_7940001 chr3R_7940001 RAL-382 2680 chr3R 7956583 7956657 chr3R 7956726 7956800 39 141 9.0 6.5 7.8 4.4 217 chr3R 7956583 intron dsx - chr3R 7956692 intron dsx - chr3R 7956800 intron dsx - chr3R_39_7955001 chr3R_7955001 RAL-382 2681 chr3R 7965269 7965332 chr3R 7965407 7965470 22 138 8.0 11.0 9.5 2.1 201 chr3R 7965269 intron dsx - chr3R 7965370 intron dsx - chr3R 7965470 intron dsx - chr3R_22_7965001 chr3R_7965001 RAL-382 2682 chr3R 7973279 7973327 chr3R 7974391 7974439 1360 18 1112 11.5 12.0 11.8 1.4 1160 chr3R 7973279 intergenic not near genes chr3R 7973859 intergenic not near genes chr3R 7974439 3` UTR CD98hc - chr3R_18_7970001 chr3R_7970001 RAL-382 2683 chr3R 8040600 8040677 chr3R 8040734 8040811 14 134 16.5 19.0 17.8 0.7 211 chr3R 8040600 intergenic not near genes chr3R 8040706 intergenic not near genes chr3R 8040811 intergenic CG43060 + chr3R_14_8040001 chr3R_8040001 RAL-382 2684 chr3R 8056112 8056179 chr3R 8056300 8056359 25 193 8.5 5.5 7.0 3.1 247 chr3R 8056112 intergenic CG43060 + chr3R 8056236 intergenic CG43060 + chr3R 8056359 intergenic CG43060 + chr3R_25_8055001 chr3R_8055001 RAL-382 2685 chr3R 8070873 8070922 chr3R 8071004 8071032 15 124 10.5 11.0 10.8 1.3 159 chr3R 8070873 intron mAChR-B + chr3R 8070952 intron mAChR-B + chr3R 8071032 intron mAChR-B + chr3R_15_8070001 chr3R_8070001 RAL-382 2686 chr3R 8082547 8082593 chr3R 8082674 8082720 15 126 10.0 12.5 11.2 1.2 173 chr3R 8082547 intron mAChR-B + chr3R 8082634 intron mAChR-B + chr3R 8082720 exon mAChR-B + chr3R_15_8080001 chr3R_8080001 RAL-382 2687 chr3R 8090518 8090561 chr3R 8094045 8094088 297 18 3525 8.5 15.5 12.0 1.4 3570 chr3R 8090518 intergenic CR44330 + chr3R 8092303 intergenic not near genes chr3R 8094088 intergenic CG7900 + chr3R_18_8090001 chr3R_8090001 RAL-382 2688 chr3R 8094367 8094427 chr3R 8099722 8099782 Transpac 19 5354 7.5 11.5 9.5 1.8 5415 chr3R 8094367 intron CG7900 + chr3R 8097074 intron CG7900 + chr3R 8099782 intron CG7900 + chr3R_19_8095001 chr3R_8095001 RAL-382 2689 chr3R 8101714 8101784 chr3R 8104848 8104896 G2 23 3132 5.5 6.0 5.8 3.4 3182 chr3R 8101714 exon CG7900 + chr3R 8103305 intron CG7900 + chr3R 8104896 3` UTR CG7900 + chr3R_23_8100001 chr3R_8100001 RAL-382 2690 chr3R 8107340 8107374 chr3R 8107524 8107558 9 184 12.0 9.0 10.5 0.8 218 chr3R 8107340 intron puc + chr3R 8107449 intron puc + chr3R 8107558 intron puc + chr3R_9_8105001 chr3R_8105001 RAL-382 2691 chr3R 8107375 8107407 chr3R 8107519 8107591 14 181 6.0 7.5 6.8 1.8 216 chr3R 8107375 intron puc + chr3R 8107483 intron puc + chr3R 8107591 intron puc + chr3R_14_8105001 chr3R_8105001 RAL-382 2692 chr3R 8207504 8207583 chr3R 8208400 8208468 F-element 31 890 6.5 6.5 6.5 4.1 964 chr3R 8207504 intergenic not near genes chr3R 8207986 intergenic not near genes chr3R 8208468 intergenic not near genes chr3R_31_8205001 chr3R_8205001 RAL-382 2693 chr3R 8212994 8213034 chr3R 8213100 8213135 13 119 4.0 6.5 5.2 2.1 141 chr3R 8212994 intergenic not near genes chr3R 8213064 intergenic not near genes chr3R 8213135 intergenic not near genes chr3R_13_8210001 chr3R_8210001 RAL-382 2694 chr3R 8255474 8255531 chr3R 8255603 8255670 13 133 4.0 8.5 6.2 1.8 196 chr3R 8255474 intron mtg + chr3R 8255572 intron mtg + chr3R 8255670 intron mtg + chr3R_13_8255001 chr3R_8255001 RAL-382 2695 chr3R 8273694 8273755 chr3R 8273825 8273892 37 136 8.5 9.0 8.8 3.8 198 chr3R 8273694 intergenic not near genes chr3R 8273793 intergenic not near genes chr3R 8273892 intergenic not near genes chr3R_37_8270001 chr3R_8270001 RAL-382 2696 chr3R 8287384 8287385 chr3R 22081600 22081601 6 13794216 32.5 11.0 21.8 0.3 13794217 chr3R 8287384 intron CR44318 + chr3R 15184492 intron Gyc88E + chr3R 22081601 intron CG13408 + chr3R_6_15180001 chr3R_15180001 RAL-382 2697 chr3R 8304196 8304270 chr3R 8304342 8304416 41 146 9.0 8.0 8.5 4.3 220 chr3R 8304196 3` UTR Sgt1 - chr3R 8304306 3` UTR Sgt1 - chr3R 8304416 3` UTR Sgt1 - chr3R_41_8300001 chr3R_8300001 RAL-382 2698 chr3R 8339241 8339247 chr3R 21907534 21907536 24 13568289 39.0 34.5 36.8 0.6 13568295 chr3R 8339241 intergenic not near genes chr3R 15123388 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_24_15120001 chr3R_15120001 RAL-382 2699 chr3R 8374133 8374172 chr3R 8374298 8374336 8 158 6.5 11.5 9.0 0.8 203 chr3R 8374133 intron CG45263 - chr3R 8374234 intron CG45263 - chr3R 8374336 intron CG45263 - chr3R_8_8370001 chr3R_8370001 RAL-382 2700 chr3R 8402966 8403033 chr3R 8412182 8412248 roo 11 9215 4.0 5.5 4.8 1.9 9282 chr3R 8402966 intron CG45263 - chr3R 8407607 intron CG45263 - chr3R 8412248 intron CG45263 - chr3R_11_8405001 chr3R_8405001 RAL-382 2701 chr3R 8478131 8478209 chr3R 8478417 8478490 31 284 9.0 6.5 7.8 3.5 359 chr3R 8478131 intergenic not near genes chr3R 8478310 intergenic not near genes chr3R 8478490 intergenic not near genes chr3R_31_8475001 chr3R_8475001 RAL-382 2702 chr3R 8541310 8541359 chr3R 8541430 8541490 15 126 5.0 2.5 3.8 3.1 180 chr3R 8541310 intergenic not near genes chr3R 8541400 intergenic not near genes chr3R 8541490 intergenic not near genes chr3R_15_8540001 chr3R_8540001 RAL-382 2703 chr3R 8552330 8552392 chr3R 8552455 8552522 18 125 7.5 6.5 7.0 2.2 192 chr3R 8552330 intergenic Or85d + chr3R 8552426 intergenic Or85d + chr3R 8552522 intergenic Or85d + chr3R_18_8550001 chr3R_8550001 RAL-382 2704 chr3R 8555489 8555508 chr3R 8555711 8555730 5 220 11.5 10.5 11.0 0.4 241 chr3R 8555489 intergenic not near genes chr3R 8555610 intergenic not near genes chr3R 8555730 intergenic not near genes chr3R_5_8555001 chr3R_8555001 RAL-382 2705 chr3R 8555509 8555561 chr3R 8555709 8555783 25 216 3.0 9.5 6.2 3.5 274 chr3R 8555509 intergenic not near genes chr3R 8555646 intergenic not near genes chr3R 8555783 intergenic not near genes chr3R_25_8555001 chr3R_8555001 RAL-382 2706 chr3R 8570454 8570463 chr3R 8575140 8575149 HMS-Beagle 4 4686 9.5 19.5 14.5 0.3 4695 chr3R 8570454 intergenic not near genes chr3R 8572802 intergenic not near genes chr3R 8575149 intergenic not near genes chr3R_4_8570001 chr3R_8570001 RAL-382 2707 chr3R 8570464 8570499 chr3R 8575118 8575181 HMS-Beagle 10 4675 5.0 12.5 8.8 1.0 4717 chr3R 8570464 intergenic not near genes chr3R 8572822 intergenic not near genes chr3R 8575181 intergenic not near genes chr3R_10_8570001 chr3R_8570001 RAL-382 2708 chr3R 8582926 8582974 chr3R 8583063 8583081 16 130 9.5 9.0 9.2 1.6 155 chr3R 8582926 intron 5-HT2B + chr3R 8583004 intron 5-HT2B + chr3R 8583081 intron 5-HT2B + chr3R_16_8580001 chr3R_8580001 RAL-382 2709 chr3R 8601736 8601746 chr3R 8610939 8610942 roo 7 9202 22.5 12.0 17.2 0.4 9206 chr3R 8601736 intron 5-HT2B + chr3R 8606339 intron 5-HT2B + chr3R 8610942 intron 5-HT2B + chr3R_7_8605001 chr3R_8605001 RAL-382 2710 chr3R 8601748 8601788 chr3R 8610930 8610991 roo 20 9197 8.5 10.0 9.2 2.0 9243 chr3R 8601748 intron 5-HT2B + chr3R 8606370 intron 5-HT2B + chr3R 8610991 intron 5-HT2B + chr3R_20_8605001 chr3R_8605001 RAL-382 2711 chr3R 8614791 8614812 chr3R 8614989 8615035 13 239 0.0 7.5 3.8 2.7 244 chr3R 8614791 intron 5-HT2B + chr3R 8614913 intron 5-HT2B + chr3R 8615035 intron 5-HT2B + chr3R_13_8610001 chr3R_8610001 RAL-382 2712 chr3R 8642369 8642448 chr3R 8642496 8642524 24 113 8.0 8.0 8.0 2.7 155 chr3R 8642369 intergenic not near genes chr3R 8642446 intergenic not near genes chr3R 8642524 intergenic not near genes chr3R_24_8640001 chr3R_8640001 RAL-382 2713 chr3R 8707318 8707379 chr3R 8709798 8709849 jockey 19 2485 10.5 6.5 8.5 2.0 2531 chr3R 8707318 intergenic not near genes chr3R 8708584 intergenic not near genes chr3R 8709849 intergenic not near genes chr3R_19_8705001 chr3R_8705001 RAL-382 2714 chr3R 8745702 8745772 chr3R 8745863 8745933 36 161 9.5 13.0 11.2 3.0 231 chr3R 8745702 intron CG9801 - chr3R 8745818 intron CG9801 - chr3R 8745933 intron CG9801 - chr3R_36_8745001 chr3R_8745001 RAL-382 2715 chr3R 8843465 8843532 chr3R 8843727 8843780 16 260 10.5 6.0 8.2 1.7 315 chr3R 8843465 intron pyd - chr3R 8843622 intron pyd - chr3R 8843780 intron pyd - chr3R_16_8840001 chr3R_8840001 RAL-382 2716 chr3R 8868761 8868782 chr3R 8872655 8872676 297 4 3893 18.0 13.0 15.5 0.2 3915 chr3R 8868761 intron pyd - chr3R 8870718 intron pyd - chr3R 8872676 intron pyd - chr3R_4_8870001 chr3R_8870001 RAL-382 2717 chr3R 8883270 8883331 chr3R 8883401 8883456 10 130 7.0 8.0 7.5 1.2 186 chr3R 8883270 intron pyd - chr3R 8883363 intron pyd - chr3R 8883456 intron pyd - chr3R_10_8880001 chr3R_8880001 RAL-382 2718 chr3R 8894834 8894887 chr3R 8896040 8896093 1360 28 1206 10.0 14.0 12.0 2.2 1259 chr3R 8894834 intron pyd - chr3R 8895464 intron pyd - chr3R 8896093 intron pyd - chr3R_28_8895001 chr3R_8895001 RAL-382 2719 chr3R 8898183 8898213 chr3R 8913813 8913843 297 7 15628 11.0 3.0 7.0 0.9 15660 chr3R 8898183 intron pyd - chr3R 8906013 intron pyd - chr3R 8913843 intron pyd - chr3R_7_8905001 chr3R_8905001 RAL-382 2720 chr3R 9036663 9036740 chr3R 9036809 9036886 33 143 10.0 10.0 10.0 3.0 223 chr3R 9036663 intron neur - chr3R 9036774 intron neur - chr3R 9036886 intron neur - chr3R_33_9035001 chr3R_9035001 RAL-382 2721 chr3R 9101800 9101856 chr3R 9101948 9102004 26 148 7.0 12.0 9.5 2.5 204 chr3R 9101800 intron pum - chr3R 9101902 intron pum - chr3R 9102004 intron pum - chr3R_26_9100001 chr3R_9100001 RAL-382 2722 chr3R 9108817 9108880 chr3R 9108943 9109006 35 124 11.0 11.0 11.0 2.9 189 chr3R 9108817 intron pum - chr3R 9108912 intron pum - chr3R 9109006 intron pum - chr3R_35_9105001 chr3R_9105001 RAL-382 2723 chr3R 9141097 9141162 chr3R 9141231 9141296 27 133 10.5 9.5 10.0 2.5 199 chr3R 9141097 intron pum - chr3R 9141196 intron pum - chr3R 9141296 intron pum - chr3R_27_9140001 chr3R_9140001 RAL-382 2724 chr3R 9202801 9202827 chr3R 9202940 9202966 12 139 5.0 12.0 8.5 1.3 165 chr3R 9202801 intron pum - chr3R 9202884 intron pum - chr3R 9202966 intron pum - chr3R_12_9200001 chr3R_9200001 RAL-382 2725 chr3R 9202828 9202870 chr3R 9202939 9203001 20 136 5.0 12.0 8.5 2.1 173 chr3R 9202828 intron pum - chr3R 9202914 intron pum - chr3R 9203001 intron pum - chr3R_20_9200001 chr3R_9200001 RAL-382 2726 chr3R 9227928 9227964 chr3R 9228092 9228131 10 165 9.5 19.5 14.5 0.6 203 chr3R 9227928 intron pum - chr3R 9228030 intron pum - chr3R 9228131 intron pum - chr3R_10_9225001 chr3R_9225001 RAL-382 2727 chr3R 9249671 9249742 chr3R 9249806 9249851 27 129 9.0 5.5 7.2 3.3 180 chr3R 9249671 intron CG8420 + chr3R 9249761 intron CG8420 + chr3R 9249851 intron CG8420 + chr3R_27_9245001 chr3R_9245001 RAL-382 2728 chr3R 9278733 9278809 chr3R 9284041 9284103 Rt1a 22 5306 7.5 6.0 6.8 2.8 5370 chr3R 9278733 intergenic not near genes chr3R 9281418 intergenic not near genes chr3R 9284103 intergenic not near genes chr3R_22_9280001 chr3R_9280001 RAL-382 2729 chr3R 9294974 9295047 chr3R 9295102 9295175 34 127 9.0 6.5 7.8 3.9 201 chr3R 9294974 3` UTR CG8861 - chr3R 9295074 3` UTR CG8861 - chr3R 9295175 3` UTR CG8861 - chr3R_34_9295001 chr3R_9295001 RAL-382 2730 chr3R 9319533 9319595 chr3R 9320018 9320080 jockey 25 485 6.5 12.0 9.2 2.5 547 chr3R 9319533 intron CG8861 - chr3R 9319806 intron CG8861 - chr3R 9320080 intron CG8861 - chr3R_25_9315001 chr3R_9315001 RAL-382 2731 chr3R 9361809 9361835 chr3R 9362100 9362126 pogo 13 291 14.5 20.5 17.5 0.7 317 chr3R 9361809 3` UTR CG45050 + chr3R 9361968 3` UTR CG45050 + chr3R 9362126 3` UTR CG45050 + chr3R_13_9360001 chr3R_9360001 RAL-382 2732 chr3R 9379094 9379175 chr3R 9379226 9379297 8 130 1.0 4.5 2.8 2.1 203 chr3R 9379094 intron FER - chr3R 9379196 intron FER - chr3R 9379297 intron FER - chr3R_8_9375001 chr3R_9375001 RAL-382 2733 chr3R 9382789 9382840 chr3R 9382964 9383015 25 173 7.5 13.5 10.5 2.2 226 chr3R 9382789 intron FER - chr3R 9382902 intron FER - chr3R 9383015 intron FER - chr3R_25_9380001 chr3R_9380001 RAL-382 2734 chr3R 9403412 9403456 chr3R 9405296 9405321 6 1869 59.0 54.5 56.8 0.1 1909 chr3R 9403412 exon CG9356 - chr3R 9404366 intergenic CG42511 +,CG8135 +,CG9356 - chr3R 9405321 intron,intron CG42511 +,CG8135 + chr3R_6_9400001 chr3R_9400001 RAL-382 2735 chr3R 9439937 9439950 chr3R 9440085 9440098 4 148 22.0 8.5 15.2 0.2 161 chr3R 9439937 intron ps + chr3R 9440018 intron ps + chr3R 9440098 intron ps + chr3R_4_9440001 chr3R_9440001 RAL-382 2736 chr3R 9599578 9599586 chr3R 9600749 9600757 7 1171 22.0 7.0 14.5 0.5 1179 chr3R 9599578 intron CG8312 + chr3R 9600168 intron CG8312 + chr3R 9600757 intron CG8312 + chr3R_7_9600001 chr3R_9600001 RAL-382 2737 chr3R 9599589 9599640 chr3R 9600748 9600811 29 1169 10.0 6.5 8.2 3.2 1222 chr3R 9599589 intron CG8312 + chr3R 9600200 intron CG8312 + chr3R 9600811 intron CG8312 + chr3R_29_9600001 chr3R_9600001 RAL-382 2738 chr3R 9601415 9601443 chr3R 9601583 9601611 16 168 14.5 9.0 11.8 1.2 196 chr3R 9601415 intron CG8312 + chr3R 9601513 intron CG8312 + chr3R 9601611 intron CG8312 + chr3R_16_9600001 chr3R_9600001 RAL-382 2739 chr3R 9601447 9601492 chr3R 9601579 9601660 17 159 7.5 9.0 8.2 1.8 213 chr3R 9601447 intron CG8312 + chr3R 9601554 intron CG8312 + chr3R 9601660 intron CG8312 + chr3R_17_9600001 chr3R_9600001 RAL-382 2740 chr3R 9610799 9610867 chr3R 9610991 9611059 38 190 10.5 11.0 10.8 3.2 260 chr3R 9610799 intron CG8312 + chr3R 9610929 intron CG8312 + chr3R 9611059 intron CG8312 + chr3R_38_9610001 chr3R_9610001 RAL-382 2741 chr3R 9614055 9614135 chr3R 9614250 9614330 30 194 9.0 6.5 7.8 3.4 275 chr3R 9614055 intron CG8312 + chr3R 9614192 intron CG8312 + chr3R 9614330 intron CG8312 + chr3R_30_9610001 chr3R_9610001 RAL-382 2742 chr3R 9645222 9645245 chr3R 9645349 9645372 9 124 13.5 11.5 12.5 0.7 150 chr3R 9645222 intron,3` UTR Dh44 +,Fst - chr3R 9645297 intron,exon Dh44 +,Fst - chr3R 9645372 intron,exon Dh44 +,Fst - chr3R_9_9645001 chr3R_9645001 RAL-382 2743 chr3R 9645250 9645268 chr3R 9645340 9645380 4 108 10.0 11.0 10.5 0.3 130 chr3R 9645250 intron,3` UTR Dh44 +,Fst - chr3R 9645315 intron,exon Dh44 +,Fst - chr3R 9645380 intron,exon Dh44 +,Fst - chr3R_4_9645001 chr3R_9645001 RAL-382 2744 chr3R 9702216 9702288 chr3R 9702342 9702359 8 112 10.5 8.5 9.5 0.8 143 chr3R 9702216 intron Unc-115a - chr3R 9702288 intron Unc-115a - chr3R 9702359 intron Unc-115a - chr3R_8_9700001 chr3R_9700001 RAL-382 2745 chr3R 9782407 9782442 chr3R 9784550 9784564 5 2127 42.5 35.0 38.8 0.1 2157 chr3R 9782407 3` UTR,exon CR31514 -,CG12947 + chr3R 9783486 3` UTR MtnA - chr3R 9784564 intergenic CG8500 +,MtnA - chr3R_5_9780001 chr3R_9780001 RAL-382 2746 chr3R 9815417 9815429 chr3R 9815899 9815911 5 480 17.5 1.5 9.5 0.5 494 chr3R 9815417 intergenic eloF + chr3R 9815664 intergenic CG16904 - chr3R 9815911 intergenic CG16904 - chr3R_5_9815001 chr3R_9815001 RAL-382 2747 chr3R 9815433 9815475 chr3R 9815895 9815942 12 478 12.5 1.5 7.0 1.5 509 chr3R 9815433 intergenic eloF +,CG16904 - chr3R 9815688 intergenic CG16904 - chr3R 9815942 3` UTR CG16904 - chr3R_12_9815001 chr3R_9815001 RAL-382 2748 chr3R 9857766 9857835 chr3R 9858256 9858325 31 488 4.5 7.5 6.0 4.4 559 chr3R 9857766 intron Teh1 - chr3R 9858046 intron Teh1 - chr3R 9858325 intron Teh1 - chr3R_31_9855001 chr3R_9855001 RAL-382 2749 chr3R 9920800 9920810 chr3R 9920947 9920957 7 147 6.5 20.0 13.2 0.5 157 chr3R 9920800 intron Glut4EF + chr3R 9920878 intron Glut4EF + chr3R 9920957 intron Glut4EF + chr3R_7_9920001 chr3R_9920001 RAL-382 2750 chr3R 9936832 9936865 chr3R 9936958 9936991 11 126 20.0 8.0 14.0 0.7 159 chr3R 9936832 intron Glut4EF + chr3R 9936912 intron Glut4EF + chr3R 9936991 intron Glut4EF + chr3R_11_9935001 chr3R_9935001 RAL-382 2751 chr3R 9936868 9936907 chr3R 9936949 9936962 13 112 11.0 9.0 10.0 1.2 94 chr3R 9936868 intron Glut4EF + chr3R 9936915 intron Glut4EF + chr3R 9936962 intron Glut4EF + chr3R_13_9935001 chr3R_9935001 RAL-382 2752 chr3R 10073731 10073796 chr3R 10073890 10073955 30 157 10.0 10.5 10.2 2.7 224 chr3R 10073731 3` UTR nerfin-2 + chr3R 10073843 3` UTR CG5361 - chr3R 10073955 intron CG5361 - chr3R_30_10070001 chr3R_10070001 RAL-382 2753 chr3R 10140388 10140466 chr3R 10140528 10140607 27 140 3.5 7.5 5.5 4.2 219 chr3R 10140388 3` UTR TAF1B - chr3R 10140498 3` UTR TAF1B - chr3R 10140607 3` UTR TAF1B - chr3R_27_10140001 chr3R_10140001 RAL-382 2754 chr3R 10196907 10196928 chr3R 10202944 10202965 297 11 6035 16.5 8.0 12.2 0.8 6058 chr3R 10196907 exon Syn + chr3R 10199936 intron Syn + chr3R 10202965 intron Syn + chr3R_11_10195001 chr3R_10195001 RAL-382 2755 chr3R 10231747 10231807 chr3R 10237364 10237434 mdg3 30 5626 5.5 11.5 8.5 3.2 5687 chr3R 10231747 intron CG42795 + chr3R 10234590 intron CG42795 + chr3R 10237434 intron CG42795 + chr3R_30_10230001 chr3R_10230001 RAL-382 2756 chr3R 10255342 10255382 chr3R 10260832 10260872 I-element 25 5489 15.5 14.0 14.8 1.6 5530 chr3R 10255342 intergenic Sirt6 -,CG3999 + chr3R 10258107 intron Sirt6 - chr3R 10260872 exon Sirt6 - chr3R_25_10255001 chr3R_10255001 RAL-382 2757 chr3R 10271050 10271106 chr3R 10271178 10271233 19 127 7.0 8.0 7.5 2.2 183 chr3R 10271050 intron CG43143 + chr3R 10271142 intron CG43143 + chr3R 10271233 intron CG43143 + chr3R_19_10270001 chr3R_10270001 RAL-382 2758 chr3R 10275557 10275572 chr3R 10275684 10275699 12 126 8.0 15.0 11.5 1.0 142 chr3R 10275557 intron CG43143 + chr3R 10275628 intron CG43143 + chr3R 10275699 intron CG43143 + chr3R_12_10275001 chr3R_10275001 RAL-382 2759 chr3R 10407414 10407483 chr3R 10407558 10407615 43 143 10.5 10.5 10.5 3.7 201 chr3R 10407414 intergenic CG6325 - chr3R 10407514 intergenic CG6325 - chr3R 10407615 intergenic CG6325 - chr3R_43_10405001 chr3R_10405001 RAL-382 2760 chr3R 10420638 10420654 chr3R 10420764 10420780 6 125 9.0 19.0 14.0 0.4 142 chr3R 10420638 intergenic not near genes chr3R 10420709 intergenic not near genes chr3R 10420780 intergenic not near genes chr3R_6_10420001 chr3R_10420001 RAL-382 2761 chr3R 10451877 10451877 chr3R 12722496 12722496 5 2270619 20.0 22.5 21.2 0.2 2270619 chr3R 10451877 intergenic not near genes chr3R 11587186 exon CG6791 - chr3R 12722496 intergenic Men - chr3R_5_11585001 chr3R_11585001 RAL-382 2762 chr3R 10593428 10593434 chr3R 10593565 10593571 5 137 16.0 20.0 18.0 0.3 143 chr3R 10593428 intron hth - chr3R 10593500 intron hth - chr3R 10593571 exon hth - chr3R_5_10590001 chr3R_10590001 RAL-382 2763 chr3R 10593435 10593458 chr3R 10593551 10593563 10 127 9.0 17.0 13.0 0.7 128 chr3R 10593435 intron hth - chr3R 10593499 intron hth - chr3R 10593563 exon hth - chr3R_10_10590001 chr3R_10590001 RAL-382 2764 chr3R 10641547 10641624 chr3R 10641677 10641752 17 126 6.5 4.5 5.5 2.6 205 chr3R 10641547 5` UTR CR44018 + chr3R 10641650 5` UTR CR44018 + chr3R 10641752 5` UTR CR44018 + chr3R_17_10640001 chr3R_10640001 RAL-382 2765 chr3R 10683507 10683568 chr3R 10683670 10683731 25 161 9.0 9.5 9.2 2.5 224 chr3R 10683507 intron CR44230 + chr3R 10683619 intron CR44230 + chr3R 10683731 5` UTR CR44230 + chr3R_25_10680001 chr3R_10680001 RAL-382 2766 chr3R 10716281 10716336 chr3R 10716659 10716729 18 389 8.0 8.0 8.0 2.0 448 chr3R 10716281 intergenic CG4073 + chr3R 10716505 intergenic not near genes chr3R 10716729 intergenic not near genes chr3R_18_10715001 chr3R_10715001 RAL-382 2767 chr3R 10804137 10804193 chr3R 10811717 10811775 17.6 25 7582 7.0 11.5 9.2 2.5 7638 chr3R 10804137 intergenic CG14692 - chr3R 10807956 intergenic not near genes chr3R 10811775 3` UTR CG14693 - chr3R_25_10805001 chr3R_10805001 RAL-382 2768 chr3R 10868557 10868625 chr3R 10868673 10868729 10 107 6.5 9.5 8.0 1.1 172 chr3R 10868557 5` UTR SelR - chr3R 10868643 intergenic SelR -,Tsp86D + chr3R 10868729 5` UTR Tsp86D + chr3R_10_10865001 chr3R_10865001 RAL-382 2769 chr3R 10899424 10899443 chr3R 10899529 10899570 5 119 9.0 4.5 6.8 0.6 146 chr3R 10899424 intergenic not near genes chr3R 10899497 intergenic not near genes chr3R 10899570 intergenic not near genes chr3R_5_10895001 chr3R_10895001 RAL-382 2770 chr3R 10899448 10899476 chr3R 10899525 10899558 14 105 5.0 5.0 5.0 2.3 110 chr3R 10899448 intergenic not near genes chr3R 10899503 intergenic not near genes chr3R 10899558 intergenic not near genes chr3R_14_10895001 chr3R_10895001 RAL-382 2771 chr3R 10919640 10919714 chr3R 10919768 10919842 37 126 9.0 9.0 9.0 3.7 202 chr3R 10919640 intergenic not near genes chr3R 10919741 intergenic not near genes chr3R 10919842 intergenic not near genes chr3R_37_10915001 chr3R_10915001 RAL-382 2772 chr3R 10920002 10920066 chr3R 10920130 10920194 18 127 6.0 8.0 7.0 2.2 192 chr3R 10920002 intergenic not near genes chr3R 10920098 intergenic not near genes chr3R 10920194 intergenic not near genes chr3R_18_10920001 chr3R_10920001 RAL-382 2773 chr3R 10927238 10927286 chr3R 10927616 10927664 18 377 7.5 12.0 9.8 1.7 426 chr3R 10927238 intergenic not near genes chr3R 10927451 intergenic not near genes chr3R 10927664 intergenic not near genes chr3R_18_10925001 chr3R_10925001 RAL-382 2774 chr3R 10957852 10957884 chr3R 10963269 10963282 Rt1c 10 5413 7.0 7.5 7.2 1.2 5430 chr3R 10957852 intergenic not near genes chr3R 10960567 intergenic not near genes chr3R 10963282 intergenic not near genes chr3R_10_10960001 chr3R_10960001 RAL-382 2775 chr3R 10979618 10979671 chr3R 10979750 10979803 17 130 8.5 9.0 8.8 1.7 185 chr3R 10979618 intron CG34114 + chr3R 10979710 intron CG34114 + chr3R 10979803 intron CG34114 + chr3R_17_10975001 chr3R_10975001 RAL-382 2776 chr3R 11010702 11010769 chr3R 11010846 11010923 19 150 6.5 0.0 3.2 4.5 221 chr3R 11010702 intron CG34114 + chr3R 11010812 intron CG34114 + chr3R 11010923 intron CG34114 + chr3R_19_11010001 chr3R_11010001 RAL-382 2777 chr3R 11056844 11056896 chr3R 11056972 11057024 14 128 9.0 0.0 4.5 2.5 180 chr3R 11056844 intergenic not near genes chr3R 11056934 intergenic not near genes chr3R 11057024 intergenic not near genes chr3R_14_11055001 chr3R_11055001 RAL-382 2778 chr3R 11065596 11065615 chr3R 11071245 11071319 297 6 5695 8.0 5.5 6.8 0.8 5723 chr3R 11065596 intergenic not near genes chr3R 11068458 intergenic not near genes chr3R 11071319 intergenic not near genes chr3R_6_11065001 chr3R_11065001 RAL-382 2779 chr3R 11102280 11102337 chr3R 11102411 11102423 16 126 14.5 8.5 11.5 1.3 143 chr3R 11102280 intergenic not near genes chr3R 11102352 intergenic not near genes chr3R 11102423 intergenic not near genes chr3R_16_11100001 chr3R_11100001 RAL-382 2780 chr3R 11154992 11155069 chr3R 11155120 11155197 29 126 5.0 9.0 7.0 3.6 205 chr3R 11154992 intron Ugt86Dc + chr3R 11155094 intron Ugt86Dc + chr3R 11155197 exon Ugt86Dc + chr3R_29_11155001 chr3R_11155001 RAL-382 2781 chr3R 11174545 11174611 chr3R 11175308 11175375 17 761 37.0 49.0 43.0 0.4 830 chr3R 11174545 exon Ugt86Dj - chr3R 11174960 intron Ugt86Dj - chr3R 11175375 exon Ugt86Dj - chr3R_17_11170001 chr3R_11170001 RAL-382 2782 chr3R 11247198 11247226 chr3R 11247329 11247357 INE-1 10 131 18.5 6.0 12.2 0.8 159 chr3R 11247198 intergenic CG5214 +,CR43283 - chr3R 11247278 intergenic CR43283 -,CG5214 + chr3R 11247357 intergenic CR43283 -,CG5214 + chr3R_10_11245001 chr3R_11245001 RAL-382 2783 chr3R 11261229 11261248 chr3R 11261339 11261394 7 139 4.5 6.0 5.2 1.1 165 chr3R 11261229 intergenic not near genes chr3R 11261312 intergenic not near genes chr3R 11261394 intergenic not near genes chr3R_7_11260001 chr3R_11260001 RAL-382 2784 chr3R 11269402 11269471 chr3R 11269577 11269646 29 175 4.5 5.5 5.0 4.8 244 chr3R 11269402 intergenic CR31386 - chr3R 11269524 3` UTR CR31386 - chr3R 11269646 3` UTR CR31386 - chr3R_29_11265001 chr3R_11265001 RAL-382 2785 chr3R 11302049 11302118 chr3R 11302181 11302252 32 134 6.0 9.0 7.5 3.8 203 chr3R 11302049 intron CR31386 - chr3R 11302150 intron CR31386 - chr3R 11302252 intron CR31386 - chr3R_32_11300001 chr3R_11300001 RAL-382 2786 chr3R 11307165 11307168 chr3R 11307295 11307305 4 134 13.5 13.0 13.2 0.3 140 chr3R 11307165 intergenic not near genes chr3R 11307235 intergenic not near genes chr3R 11307305 intergenic not near genes chr3R_4_11305001 chr3R_11305001 RAL-382 2787 chr3R 11307170 11307200 chr3R 11307292 11307337 8 125 10.0 13.0 11.5 0.6 167 chr3R 11307170 intergenic not near genes chr3R 11307254 intergenic not near genes chr3R 11307337 intergenic not near genes chr3R_8_11305001 chr3R_11305001 RAL-382 2788 chr3R 11307202 11307210 chr3R 11307275 11307292 4 96 8.0 8.5 8.2 0.4 90 chr3R 11307202 intergenic not near genes chr3R 11307247 intergenic not near genes chr3R 11307292 intergenic not near genes chr3R_4_11305001 chr3R_11305001 RAL-382 2789 chr3R 11325293 11325361 chr3R 11325438 11325500 9 137 3.5 6.0 4.8 1.6 207 chr3R 11325293 intergenic not near genes chr3R 11325396 intergenic not near genes chr3R 11325500 intergenic not near genes chr3R_9_11325001 chr3R_11325001 RAL-382 2790 chr3R 11342506 11342574 chr3R 11342632 11342700 40 125 7.5 6.5 7.0 5.0 194 chr3R 11342506 intron pros + chr3R 11342603 intron pros + chr3R 11342700 intron pros + chr3R_40_11340001 chr3R_11340001 RAL-382 2791 chr3R 11345594 11345658 chr3R 11345743 11345807 23 143 10.5 10.0 10.2 2.1 213 chr3R 11345594 intron pros + chr3R 11345700 intron pros + chr3R 11345807 intron pros + chr3R_23_11345001 chr3R_11345001 RAL-382 2792 chr3R 11379198 11379227 chr3R 11388403 11388432 roo 6 9204 7.5 8.5 8.0 0.7 9234 chr3R 11379198 intron pros + chr3R 11383815 intron pros + chr3R 11388432 intron pros + chr3R_6_11380001 chr3R_11380001 RAL-382 2793 chr3R 11518772 11518845 chr3R 11518913 11518968 29 140 5.5 9.5 7.5 3.4 196 chr3R 11518772 intergenic not near genes chr3R 11518870 intergenic not near genes chr3R 11518968 intergenic not near genes chr3R_29_11515001 chr3R_11515001 RAL-382 2794 chr3R 11567770 11567812 chr3R 11567891 11567936 24 137 0.0 13.0 6.5 3.2 166 chr3R 11567770 intergenic not near genes chr3R 11567853 intergenic not near genes chr3R 11567936 intergenic not near genes chr3R_24_11565001 chr3R_11565001 RAL-382 2795 chr3R 11639179 11639245 chr3R 11639374 11639440 27 194 9.5 6.5 8.0 3.0 261 chr3R 11639179 intron Csk - chr3R 11639310 intron Csk - chr3R 11639440 intron Csk - chr3R_27_11635001 chr3R_11635001 RAL-382 2796 chr3R 11694692 11694719 chr3R 11694835 11694862 11 141 0.5 11.0 5.8 1.6 170 chr3R 11694692 intergenic Fer3 - chr3R 11694777 intergenic Fer3 - chr3R 11694862 intergenic not near genes chr3R_11_11690001 chr3R_11690001 RAL-382 2797 chr3R 11694720 11694741 chr3R 11694833 11694884 10 140 0.5 11.0 5.8 1.5 164 chr3R 11694720 intergenic Fer3 - chr3R 11694802 intergenic Fer3 - chr3R 11694884 intergenic not near genes chr3R_10_11690001 chr3R_11690001 RAL-382 2798 chr3R 11695693 11695714 chr3R 11695824 11695845 10 130 16.0 6.0 11.0 0.8 152 chr3R 11695693 intergenic not near genes chr3R 11695769 intergenic not near genes chr3R 11695845 intergenic not near genes chr3R_10_11695001 chr3R_11695001 RAL-382 2799 chr3R 11695715 11695768 chr3R 11695821 11695890 24 128 6.5 6.0 6.2 3.3 175 chr3R 11695715 intergenic not near genes chr3R 11695802 intergenic not near genes chr3R 11695890 intergenic not near genes chr3R_24_11695001 chr3R_11695001 RAL-382 2800 chr3R 11734114 11734129 chr3R 11734283 11734298 7 169 18.5 2.0 10.2 0.6 184 chr3R 11734114 intergenic not near genes chr3R 11734206 intergenic not near genes chr3R 11734298 intergenic not near genes chr3R_7_11730001 chr3R_11730001 RAL-382 2801 chr3R 11734138 11734185 chr3R 11734281 11734354 16 156 6.0 2.0 4.0 3.2 216 chr3R 11734138 intergenic not near genes chr3R 11734246 intergenic not near genes chr3R 11734354 intergenic not near genes chr3R_16_11730001 chr3R_11730001 RAL-382 2802 chr3R 11763873 11763939 chr3R 11764003 11764070 4 130 7.5 10.0 8.8 0.4 197 chr3R 11763873 5` UTR Lk6 - chr3R 11763972 5` UTR Lk6 - chr3R 11764070 5` UTR Lk6 - chr3R_4_11760001 chr3R_11760001 RAL-382 2803 chr3R 11830300 11830356 chr3R 11830434 11830490 28 133 7.5 8.5 8.0 3.1 190 chr3R 11830300 intron CG6959 - chr3R 11830395 intron CG6959 - chr3R 11830490 intron CG6959 - chr3R_28_11830001 chr3R_11830001 RAL-382 2804 chr3R 11830925 11831002 chr3R 11831119 11831179 14 190 0.0 6.5 3.2 3.3 254 chr3R 11830925 intron CG6959 - chr3R 11831052 intron CG6959 - chr3R 11831179 intron CG6959 - chr3R_14_11830001 chr3R_11830001 RAL-382 2805 chr3R 11841026 11841090 chr3R 11846261 11846316 BS 15 5235 4.0 12.0 8.0 1.7 5290 chr3R 11841026 intron CG6959 - chr3R 11843671 intron CG6959 - chr3R 11846316 intron CG6959 - chr3R_15_11840001 chr3R_11840001 RAL-382 2806 chr3R 11909317 11909379 chr3R 11909447 11909510 14 119 12.0 8.5 10.2 1.2 193 chr3R 11909317 intron Cad87A - chr3R 11909414 intron Cad87A - chr3R 11909510 intron Cad87A - chr3R_14_11905001 chr3R_11905001 RAL-382 2807 chr3R 11957807 11957880 chr3R 11958140 11958213 S-element 18 331 7.0 0.5 3.8 3.8 406 chr3R 11957807 intergenic not near genes chr3R 11958010 intergenic not near genes chr3R 11958213 intergenic not near genes chr3R_18_11955001 chr3R_11955001 RAL-382 2808 chr3R 12022836 12022915 chr3R 12025063 12025126 pogo 39 2225 7.5 8.0 7.8 4.4 2290 chr3R 12022836 intergenic not near genes chr3R 12023981 intergenic not near genes chr3R 12025126 intergenic not near genes chr3R_39_12020001 chr3R_12020001 RAL-382 2809 chr3R 12086322 12086389 chr3R 12086453 12086519 22 131 7.0 6.5 6.8 2.8 197 chr3R 12086322 intron CG14741 - chr3R 12086420 intron CG14741 - chr3R 12086519 intron CG14741 - chr3R_22_12085001 chr3R_12085001 RAL-382 2810 chr3R 12169196 12169222 chr3R 12169324 12169350 16 128 22.0 14.0 18.0 0.8 154 chr3R 12169196 intergenic not near genes chr3R 12169273 intergenic not near genes chr3R 12169350 intergenic not near genes chr3R_16_12165001 chr3R_12165001 RAL-382 2811 chr3R 12174973 12175005 chr3R 12175388 12175420 12 413 17.0 11.5 14.2 0.8 447 chr3R 12174973 intergenic not near genes chr3R 12175196 intergenic not near genes chr3R 12175420 intergenic not near genes chr3R_12_12175001 chr3R_12175001 RAL-382 2812 chr3R 12175006 12175043 chr3R 12175381 12175458 15 399 7.5 10.0 8.8 1.5 452 chr3R 12175006 intergenic not near genes chr3R 12175232 intergenic not near genes chr3R 12175458 intergenic not near genes chr3R_15_12175001 chr3R_12175001 RAL-382 2813 chr3R 12202229 12202309 chr3R 12202399 12202468 24 167 0.0 10.5 5.2 3.9 239 chr3R 12202229 intergenic not near genes chr3R 12202348 intergenic not near genes chr3R 12202468 intergenic not near genes chr3R_24_12200001 chr3R_12200001 RAL-382 2814 chr3R 12297624 12297640 chr3R 12297751 12297767 5 126 11.0 18.5 14.8 0.3 143 chr3R 12297624 intron svp + chr3R 12297696 intron svp + chr3R 12297767 intron svp + chr3R_5_12295001 chr3R_12295001 RAL-382 2815 chr3R 12344081 12344154 chr3R 12344208 12344281 30 124 4.5 6.0 5.2 4.8 200 chr3R 12344081 intergenic not near genes chr3R 12344181 intergenic not near genes chr3R 12344281 intergenic not near genes chr3R_30_12340001 chr3R_12340001 RAL-382 2816 chr3R 12392843 12392895 chr3R 12392993 12393045 17 146 9.0 13.5 11.2 1.4 202 chr3R 12392843 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12392944 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12393045 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R_17_12390001 chr3R_12390001 RAL-382 2817 chr3R 12524103 12524160 chr3R 12524233 12524290 24 129 7.5 14.0 10.8 2.0 187 chr3R 12524103 intron Octbeta3R - chr3R 12524196 intron Octbeta3R - chr3R 12524290 intron Octbeta3R - chr3R_24_12520001 chr3R_12520001 RAL-382 2818 chr3R 12602360 12602412 chr3R 12602483 12602540 19 127 10.5 10.5 10.5 1.7 180 chr3R 12602360 intergenic not near genes chr3R 12602450 intergenic not near genes chr3R 12602540 intergenic not near genes chr3R_19_12600001 chr3R_12600001 RAL-382 2819 chr3R 12735133 12735171 chr3R 12735433 12735471 26 300 10.0 6.5 8.2 2.8 338 chr3R 12735133 intergenic not near genes chr3R 12735302 intergenic not near genes chr3R 12735471 intergenic not near genes chr3R_26_12735001 chr3R_12735001 RAL-382 2820 chr3R 12758080 12758143 chr3R 12758224 12758287 24 142 7.5 14.0 10.8 2.0 207 chr3R 12758080 intron beat-Vc - chr3R 12758184 intron beat-Vc - chr3R 12758287 intron beat-Vc - chr3R_24_12755001 chr3R_12755001 RAL-382 2821 chr3R 12763060 12763151 chr3R 12763198 12763278 31 131 1.5 6.0 3.8 6.5 218 chr3R 12763060 intron beat-Vc - chr3R 12763169 intron beat-Vc - chr3R 12763278 intron beat-Vc - chr3R_31_12760001 chr3R_12760001 RAL-382 2822 chr3R 12818985 12818988 chr3R 12819118 12819121 4 133 16.5 7.5 12.0 0.3 136 chr3R 12818985 intergenic not near genes chr3R 12819053 intergenic not near genes chr3R 12819121 intergenic not near genes chr3R_4_12815001 chr3R_12815001 RAL-382 2823 chr3R 12818989 12819052 chr3R 12819114 12819186 23 132 7.0 7.0 7.0 2.9 197 chr3R 12818989 intergenic not near genes chr3R 12819088 intergenic not near genes chr3R 12819186 intergenic not near genes chr3R_23_12815001 chr3R_12815001 RAL-382 2824 chr3R 12838242 12838249 chr3R 12838439 12838446 7 197 16.0 12.5 14.2 0.5 204 chr3R 12838242 intergenic not near genes chr3R 12838344 intergenic not near genes chr3R 12838446 intergenic not near genes chr3R_7_12835001 chr3R_12835001 RAL-382 2825 chr3R 12838277 12838316 chr3R 12838462 12838512 23 192 7.5 17.5 12.5 1.7 235 chr3R 12838277 intergenic not near genes chr3R 12838394 intergenic not near genes chr3R 12838512 intergenic not near genes chr3R_23_12835001 chr3R_12835001 RAL-382 2826 chr3R 12864528 12864581 chr3R 12865063 12865116 roo 15 535 5.0 9.0 7.0 1.9 588 chr3R 12864528 intergenic not near genes chr3R 12864822 intergenic not near genes chr3R 12865116 intergenic not near genes chr3R_15_12860001 chr3R_12860001 RAL-382 2827 chr3R 12881795 12881802 chr3R 12881931 12881938 6 136 6.0 10.5 8.2 0.7 143 chr3R 12881795 intergenic not near genes chr3R 12881866 intergenic not near genes chr3R 12881938 intergenic not near genes chr3R_6_12880001 chr3R_12880001 RAL-382 2828 chr3R 12920138 12920176 chr3R 12925355 12925429 copia 17 5247 14.0 4.0 9.0 1.7 5291 chr3R 12920138 intron beat-Vb + chr3R 12922784 intron beat-Vb + chr3R 12925429 intron beat-Vb + chr3R_17_12920001 chr3R_12920001 RAL-382 2829 chr3R 12935303 12935320 chr3R 12935457 12935474 10 154 14.5 0.0 7.2 1.2 171 chr3R 12935303 intergenic beat-Vb + chr3R 12935388 intergenic not near genes chr3R 12935474 intergenic not near genes chr3R_10_12935001 chr3R_12935001 RAL-382 2830 chr3R 12974605 12974665 chr3R 12974858 12974920 31 254 8.0 9.0 8.5 3.3 315 chr3R 12974605 intron CG7381 - chr3R 12974762 intron CG7381 - chr3R 12974920 intron CG7381 - chr3R_31_12970001 chr3R_12970001 RAL-382 2831 chr3R 13018107 13018171 chr3R 13018236 13018258 37 128 9.5 13.0 11.2 3.0 151 chr3R 13018107 intron CtBP + chr3R 13018182 intron CtBP + chr3R 13018258 intron CtBP + chr3R_37_13015001 chr3R_13015001 RAL-382 2832 chr3R 13059911 13059968 chr3R 13060156 13060213 29 245 6.0 6.0 6.0 4.1 302 chr3R 13059911 intron sim + chr3R 13060062 intron sim + chr3R 13060213 intron sim + chr3R_29_13060001 chr3R_13060001 RAL-382 2833 chr3R 6412323 6412324 chr3R 13062889 13062889 4 6650566 11.5 18.0 14.8 0.3 6650566 chr3R 6412323 intron gpp + chr3R 9737606 exon CG12950 - chr3R 13062889 intron sim + chr3R_4_9735001 chr3R_9735001 RAL-382 2834 chr3R 13064735 13064793 chr3R 13064884 13064940 20 148 0.0 0.0 0.0 20.0 205 chr3R 13064735 intron sim + chr3R 13064838 intron sim + chr3R 13064940 intron sim + chr3R_20_13060001 chr3R_13060001 RAL-382 2835 chr3R 13066955 13067009 chr3R 13067092 13067146 30 135 10.5 10.5 10.5 2.6 191 chr3R 13066955 intron sim + chr3R 13067050 intron sim + chr3R 13067146 intron sim + chr3R_30_13065001 chr3R_13065001 RAL-382 2836 chr3R 13067795 13067813 chr3R 13067925 13067938 9 128 25.5 9.0 17.2 0.5 143 chr3R 13067795 intron sim + chr3R 13067866 intron sim + chr3R 13067938 intron sim + chr3R_9_13065001 chr3R_13065001 RAL-382 2837 chr3R 13067818 13067851 chr3R 13067923 13067981 14 126 14.5 9.0 11.8 1.1 163 chr3R 13067818 intron sim + chr3R 13067900 intron sim + chr3R 13067981 intron sim + chr3R_14_13065001 chr3R_13065001 RAL-382 2838 chr3R 13067853 13067867 chr3R 13067919 13067946 9 111 9.5 8.0 8.8 0.9 93 chr3R 13067853 intron sim + chr3R 13067900 intron sim + chr3R 13067946 intron sim + chr3R_9_13065001 chr3R_13065001 RAL-382 2839 chr3R 13075314 13075377 chr3R 13075445 13075508 19 131 11.0 5.5 8.2 2.1 194 chr3R 13075314 intron sim + chr3R 13075411 intron sim + chr3R 13075508 intron sim + chr3R_19_13075001 chr3R_13075001 RAL-382 2840 chr3R 13135788 13135838 chr3R 13138003 13138053 pogo 17 2215 13.5 4.5 9.0 1.7 2265 chr3R 13135788 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136920 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138053 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_17_13135001 chr3R_13135001 RAL-382 2841 chr3R 13138269 13138351 chr3R 13138414 13138479 15 131 3.0 6.5 4.8 2.6 210 chr3R 13138269 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138374 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138479 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_15_13135001 chr3R_13135001 RAL-382 2842 chr3R 13142990 13143066 chr3R 13148616 13148692 mdg3 18 5624 6.0 4.0 5.0 3.0 5702 chr3R 13142990 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145841 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148692 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_18_13145001 chr3R_13145001 RAL-382 2843 chr3R 13151318 13151392 chr3R 13151493 13151545 11 174 0.5 8.0 4.2 2.1 227 chr3R 13151318 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13151432 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13151545 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_11_13150001 chr3R_13150001 RAL-382 2844 chr3R 13314057 13314118 chr3R 13318894 13318955 Doc 20 4837 7.5 10.5 9.0 2.0 4898 chr3R 13314057 intergenic not near genes chr3R 13316506 intergenic not near genes chr3R 13318955 intergenic CG45080 - chr3R_20_13315001 chr3R_13315001 RAL-382 2845 chr3R 13348969 13349025 chr3R 13349095 13349151 7 121 11.5 11.5 11.5 0.6 182 chr3R 13348969 intergenic not near genes chr3R 13349060 intergenic not near genes chr3R 13349151 intergenic not near genes chr3R_7_13345001 chr3R_13345001 RAL-382 2846 chr3R 13364584 13364621 chr3R 13364718 13364725 17 132 14.5 0.0 7.2 2.1 141 chr3R 13364584 intron poly - chr3R 13364654 intron poly - chr3R 13364725 intron poly - chr3R_17_13360001 chr3R_13360001 RAL-382 2847 chr3R 13418615 13418684 chr3R 13418741 13418810 33 125 4.5 7.0 5.8 4.9 195 chr3R 13418615 intergenic not near genes chr3R 13418712 intergenic not near genes chr3R 13418810 intergenic not near genes chr3R_33_13415001 chr3R_13415001 RAL-382 2848 chr3R 13435342 13435419 chr3R 13435567 13435644 31 225 5.5 6.0 5.8 4.6 302 chr3R 13435342 intergenic yrt - chr3R 13435493 intergenic not near genes chr3R 13435644 intergenic not near genes chr3R_31_13435001 chr3R_13435001 RAL-382 2849 chr3R 13487482 13487485 chr3R 19199405 19199408 4 5711923 17.0 25.5 21.2 0.2 5711926 chr3R 13487482 intergenic not near genes chr3R 16343445 exon pad + chr3R 19199408 intron CG31475 + chr3R_4_16340001 chr3R_16340001 RAL-382 2850 chr3R 13517214 13517255 chr3R 13520081 13520121 jockey 15 2864 10.0 3.5 6.8 1.9 2907 chr3R 13517214 intergenic not near genes chr3R 13518668 intergenic not near genes chr3R 13520121 intergenic not near genes chr3R_15_13515001 chr3R_13515001 RAL-382 2851 chr3R 13525328 13525334 chr3R 13525461 13525467 4 132 19.0 5.5 12.2 0.3 139 chr3R 13525328 intergenic not near genes chr3R 13525398 intergenic not near genes chr3R 13525467 intergenic not near genes chr3R_4_13525001 chr3R_13525001 RAL-382 2852 chr3R 13568434 13568458 chr3R 13568561 13568568 7 124 10.5 10.5 10.5 0.6 134 chr3R 13568434 intergenic not near genes chr3R 13568501 intergenic not near genes chr3R 13568568 intergenic not near genes chr3R_7_13565001 chr3R_13565001 RAL-382 2853 chr3R 13580799 13580831 chr3R 13580926 13580958 10 127 20.0 14.0 17.0 0.6 159 chr3R 13580799 intergenic not near genes chr3R 13580878 intergenic not near genes chr3R 13580958 intergenic not near genes chr3R_10_13580001 chr3R_13580001 RAL-382 2854 chr3R 13599011 13599080 chr3R 13599141 13599210 36 129 7.5 10.0 8.8 3.7 199 chr3R 13599011 intergenic not near genes chr3R 13599110 intergenic not near genes chr3R 13599210 intergenic not near genes chr3R_36_13595001 chr3R_13595001 RAL-382 2855 chr3R 13603011 13603076 chr3R 13603147 13603216 31 140 7.0 8.5 7.8 3.5 205 chr3R 13603011 intergenic not near genes chr3R 13603114 intergenic not near genes chr3R 13603216 intergenic not near genes chr3R_31_13600001 chr3R_13600001 RAL-382 2856 chr3R 13672902 13672965 chr3R 13673024 13673093 35 127 7.5 10.5 9.0 3.5 191 chr3R 13672902 intron Task6 - chr3R 13672998 intron Task6 - chr3R 13673093 intron Task6 - chr3R_35_13670001 chr3R_13670001 RAL-382 2857 chr3R 13693028 13693028 chr3R 21907534 21907536 15 8214507 41.0 34.5 37.8 0.4 8214508 chr3R 13693028 3` UTR flfl + chr3R 17800282 exon CG17803 - chr3R 21907536 intergenic CG6678 + chr3R_15_17800001 chr3R_17800001 RAL-382 2858 chr3R 13758135 13758167 chr3R 13758271 13758303 8 136 0.0 8.5 4.2 1.5 168 chr3R 13758135 intron CG34383 + chr3R 13758219 intron CG34383 + chr3R 13758303 intron CG34383 + chr3R_8_13755001 chr3R_13755001 RAL-382 2859 chr3R 13765208 13765275 chr3R 13765341 13765364 21 130 10.5 10.5 10.5 1.8 156 chr3R 13765208 intergenic not near genes chr3R 13765286 intergenic CG9312 + chr3R 13765364 intergenic CG9312 + chr3R_21_13765001 chr3R_13765001 RAL-382 2860 chr3R 13803854 13803874 chr3R 13804118 13804123 6 262 13.0 0.0 6.5 0.8 269 chr3R 13803854 intergenic not near genes chr3R 13803988 intergenic not near genes chr3R 13804123 intergenic not near genes chr3R_6_13800001 chr3R_13800001 RAL-382 2861 chr3R 13824573 13824589 chr3R 13824727 13824750 6 156 14.5 6.5 10.5 0.5 177 chr3R 13824573 intergenic not near genes chr3R 13824662 intergenic not near genes chr3R 13824750 intergenic not near genes chr3R_6_13820001 chr3R_13820001 RAL-382 2862 chr3R 13831788 13831795 chr3R 13831937 13831944 5 149 7.0 0.0 3.5 1.1 156 chr3R 13831788 intergenic not near genes chr3R 13831866 intergenic not near genes chr3R 13831944 intergenic not near genes chr3R_5_13830001 chr3R_13830001 RAL-382 2863 chr3R 13850266 13850287 chr3R 13850411 13850432 9 145 5.0 5.0 5.0 1.5 166 chr3R 13850266 intergenic not near genes chr3R 13850349 intergenic not near genes chr3R 13850432 intergenic not near genes chr3R_9_13850001 chr3R_13850001 RAL-382 2864 chr3R 13850289 13850340 chr3R 13850407 13850478 12 137 0.5 5.0 2.8 3.2 189 chr3R 13850289 intergenic not near genes chr3R 13850384 intergenic not near genes chr3R 13850478 intergenic not near genes chr3R_12_13850001 chr3R_13850001 RAL-382 2865 chr3R 13863648 13863712 chr3R 13863771 13863800 23 129 7.5 8.0 7.8 2.6 152 chr3R 13863648 intergenic not near genes chr3R 13863724 intergenic not near genes chr3R 13863800 intergenic not near genes chr3R_23_13860001 chr3R_13860001 RAL-382 2866 chr3R 13893270 13893310 chr3R 13893410 13893446 13 144 14.0 5.0 9.5 1.2 176 chr3R 13893270 intergenic not near genes chr3R 13893358 intergenic not near genes chr3R 13893446 intergenic not near genes chr3R_13_13890001 chr3R_13890001 RAL-382 2867 chr3R 13909866 13909907 chr3R 13909995 13910036 14 128 6.5 13.0 9.8 1.3 170 chr3R 13909866 intergenic not near genes chr3R 13909951 intergenic not near genes chr3R 13910036 intergenic not near genes chr3R_14_13905001 chr3R_13905001 RAL-382 2868 chr3R 13975331 13975400 chr3R 13975461 13975530 25 129 12.0 8.0 10.0 2.3 199 chr3R 13975331 intron rdx - chr3R 13975430 intron rdx - chr3R 13975530 intron rdx - chr3R_25_13975001 chr3R_13975001 RAL-382 2869 chr3R 14014297 14014305 chr3R 14014486 14014494 5 189 7.5 10.5 9.0 0.5 197 chr3R 14014297 intron rdx - chr3R 14014396 intron rdx - chr3R 14014494 intron rdx - chr3R_5_14010001 chr3R_14010001 RAL-382 2870 chr3R 14021597 14021678 chr3R 14023464 14023545 S-element 30 1867 5.5 8.0 6.8 3.8 1948 chr3R 14021597 intron rdx - chr3R 14022571 intron rdx - chr3R 14023545 intron rdx - chr3R_30_14020001 chr3R_14020001 RAL-382 2871 chr3R 14029813 14029865 chr3R 14029951 14030003 31 138 7.0 17.5 12.2 2.3 190 chr3R 14029813 intron,exon rdx -,Cyp6d5 + chr3R 14029908 intron,intron rdx -,Cyp6d5 + chr3R 14030003 intron,intron rdx -,Cyp6d5 + chr3R_31_14025001 chr3R_14025001 RAL-382 2872 chr3R 14037533 14037585 chr3R 14037664 14037719 11 133 9.5 7.5 8.5 1.2 186 chr3R 14037533 intergenic not near genes chr3R 14037626 intergenic not near genes chr3R 14037719 intergenic not near genes chr3R_11_14035001 chr3R_14035001 RAL-382 2873 chr3R 14047722 14047802 chr3R 14047863 14047941 24 140 6.0 6.0 6.0 3.4 219 chr3R 14047722 intergenic not near genes chr3R 14047832 intergenic not near genes chr3R 14047941 intergenic not near genes chr3R_24_14045001 chr3R_14045001 RAL-382 2874 chr3R 14048962 14049025 chr3R 14049095 14049155 25 127 8.5 12.0 10.2 2.2 193 chr3R 14048962 intergenic not near genes chr3R 14049058 intergenic not near genes chr3R 14049155 intergenic not near genes chr3R_25_14045001 chr3R_14045001 RAL-382 2875 chr3R 14058076 14058144 chr3R 14058246 14058314 43 170 11.0 8.0 9.5 4.1 238 chr3R 14058076 5` UTR foxo + chr3R 14058195 intron foxo + chr3R 14058314 intron foxo + chr3R_43_14055001 chr3R_14055001 RAL-382 2876 chr3R 14063169 14063227 chr3R 14063555 14063613 39 385 17.0 13.0 15.0 2.4 444 chr3R 14063169 intron foxo + chr3R 14063391 intron foxo + chr3R 14063613 intron foxo + chr3R_39_14060001 chr3R_14060001 RAL-382 2877 chr3R 14067096 14067121 chr3R 14067225 14067236 11 128 17.5 6.5 12.0 0.8 140 chr3R 14067096 exon foxo + chr3R 14067166 intron foxo + chr3R 14067236 intron foxo + chr3R_11_14065001 chr3R_14065001 RAL-382 2878 chr3R 14067122 14067152 chr3R 14067221 14067281 9 126 7.5 5.0 6.2 1.2 159 chr3R 14067122 exon foxo + chr3R 14067202 intron foxo + chr3R 14067281 intron foxo + chr3R_9_14065001 chr3R_14065001 RAL-382 2879 chr3R 14077582 14077644 chr3R 14077709 14077771 22 127 13.0 15.5 14.2 1.4 189 chr3R 14077582 intron foxo + chr3R 14077676 intron foxo + chr3R 14077771 intron foxo + chr3R_22_14075001 chr3R_14075001 RAL-382 2880 chr3R 14089536 14089543 chr3R 14089675 14089682 4 139 10.5 5.0 7.8 0.5 146 chr3R 14089536 5` UTR Npc2b + chr3R 14089609 intron Npc2b + chr3R 14089682 intron Npc2b + chr3R_4_14085001 chr3R_14085001 RAL-382 2881 chr3R 14117414 14117429 chr3R 14117532 14117555 5 125 22.5 16.0 19.2 0.2 141 chr3R 14117414 intron Kif19A - chr3R 14117484 intron Kif19A - chr3R 14117555 intron Kif19A - chr3R_5_14115001 chr3R_14115001 RAL-382 2882 chr3R 14132565 14132630 chr3R 14132954 14133019 30 388 12.0 11.5 11.8 2.3 454 chr3R 14132565 intergenic CG14356 - chr3R 14132792 intergenic not near genes chr3R 14133019 intergenic not near genes chr3R_30_14130001 chr3R_14130001 RAL-382 2883 chr3R 14174913 14174980 chr3R 14175050 14175117 27 133 7.5 6.5 7.0 3.4 204 chr3R 14174913 3` UTR Dop1R1 - chr3R 14175015 3` UTR Dop1R1 - chr3R 14175117 3` UTR Dop1R1 - chr3R_27_14175001 chr3R_14175001 RAL-382 2884 chr3R 14180770 14180831 chr3R 14185585 14185646 F-element 20 4815 10.0 14.0 12.0 1.5 4876 chr3R 14180770 intron Dop1R1 - chr3R 14183208 intron Dop1R1 - chr3R 14185646 intron Dop1R1 - chr3R_20_14180001 chr3R_14180001 RAL-382 2885 chr3R 14194387 14194456 chr3R 14203586 14203635 roo 24 9196 9.5 13.0 11.2 2.0 9248 chr3R 14194387 intron Dop1R1 - chr3R 14199011 intron Dop1R1 - chr3R 14203635 intron Dop1R1 - chr3R_24_14195001 chr3R_14195001 RAL-382 2886 chr3R 14207091 14207161 chr3R 14208453 14208523 4 1354 31.5 26.0 28.8 0.1 1432 chr3R 14207091 intron Dop1R1 - chr3R 14207807 intron Dop1R1 - chr3R 14208523 intron Dop1R1 - chr3R_4_14205001 chr3R_14205001 RAL-382 2887 chr3R 14208488 14208556 chr3R 14208673 14208737 18 182 9.0 8.0 8.5 1.9 249 chr3R 14208488 intron Dop1R1 - chr3R 14208612 intron Dop1R1 - chr3R 14208737 intron Dop1R1 - chr3R_18_14205001 chr3R_14205001 RAL-382 2888 chr3R 14236901 14236926 chr3R 14244445 14244467 Idefix 5 7541 15.5 6.5 11.0 0.4 7566 chr3R 14236901 exon CG43291 - chr3R 14240684 intron CG43291 - chr3R 14244467 intron CG43291 - chr3R_5_14240001 chr3R_14240001 RAL-382 2889 chr3R 14246357 14246411 chr3R 14247898 14247902 jockey 18 1540 10.0 7.0 8.5 1.9 1545 chr3R 14246357 intergenic not near genes chr3R 14247130 intergenic not near genes chr3R 14247902 intergenic not near genes chr3R_18_14245001 chr3R_14245001 RAL-382 2890 chr3R 14256728 14256768 chr3R 14256864 14256904 18 135 15.0 18.0 16.5 1.0 176 chr3R 14256728 intron,exon Aats-met -,CG43179 + chr3R 14256816 intron,3` UTR Aats-met -,CG43179 + chr3R 14256904 intron,3` UTR Aats-met -,CG43179 + chr3R_18_14255001 chr3R_14255001 RAL-382 2891 chr3R 14374536 14374569 chr3R 14374697 14374730 19 161 15.5 8.5 12.0 1.5 194 chr3R 14374536 intergenic not near genes chr3R 14374633 intergenic not near genes chr3R 14374730 intergenic not near genes chr3R_19_14370001 chr3R_14370001 RAL-382 2892 chr3R 14386167 14386236 chr3R 14386297 14386370 12 132 0.5 7.0 3.8 2.5 203 chr3R 14386167 intergenic not near genes chr3R 14386268 intergenic not near genes chr3R 14386370 intergenic not near genes chr3R_12_14385001 chr3R_14385001 RAL-382 2893 chr3R 14527370 14527377 chr3R 14527487 14527504 7 123 17.0 11.0 14.0 0.5 134 chr3R 14527370 intron Pde6 - chr3R 14527437 intron Pde6 - chr3R 14527504 intron Pde6 - chr3R_7_14525001 chr3R_14525001 RAL-382 2894 chr3R 14527379 14527391 chr3R 14527485 14527517 7 124 14.5 10.5 12.5 0.5 138 chr3R 14527379 intron Pde6 - chr3R 14527448 intron Pde6 - chr3R 14527517 intron Pde6 - chr3R_7_14525001 chr3R_14525001 RAL-382 2895 chr3R 14527395 14527411 chr3R 14527481 14527537 6 120 12.0 10.5 11.2 0.5 142 chr3R 14527395 intron Pde6 - chr3R 14527466 intron Pde6 - chr3R 14527537 intron Pde6 - chr3R_6_14525001 chr3R_14525001 RAL-382 2896 chr3R 14533518 14533586 chr3R 14533649 14533716 11 131 5.5 10.5 8.0 1.2 198 chr3R 14533518 intron Pde6 - chr3R 14533617 intron Pde6 - chr3R 14533716 intron Pde6 - chr3R_11_14530001 chr3R_14530001 RAL-382 2897 chr3R 14545989 14546063 chr3R 14546116 14546170 21 122 8.5 2.0 5.2 3.4 181 chr3R 14545989 intron Pde6 - chr3R 14546080 intron Pde6 - chr3R 14546170 intron Pde6 - chr3R_21_14545001 chr3R_14545001 RAL-382 2898 chr3R 14577910 14577981 chr3R 14578076 14578147 30 166 9.0 4.0 6.5 4.0 237 chr3R 14577910 intron stumps + chr3R 14578028 intron stumps + chr3R 14578147 intron stumps + chr3R_30_14575001 chr3R_14575001 RAL-382 2899 chr3R 14579316 14579376 chr3R 14579454 14579492 19 136 15.0 9.0 12.0 1.5 176 chr3R 14579316 intron stumps + chr3R 14579404 intron stumps + chr3R 14579492 intron stumps + chr3R_19_14575001 chr3R_14575001 RAL-382 2900 chr3R 14608421 14608476 chr3R 14608563 14608618 30 142 6.5 5.0 5.8 4.4 197 chr3R 14608421 intergenic stumps + chr3R 14608520 intergenic stumps + chr3R 14608618 intergenic not near genes chr3R_30_14605001 chr3R_14605001 RAL-382 2901 chr3R 14662265 14662339 chr3R 14662396 14662470 23 130 7.5 8.5 8.0 2.6 205 chr3R 14662265 exon Rad17 - chr3R 14662368 intron Rad17 - chr3R 14662470 exon Rad17 - chr3R_23_14660001 chr3R_14660001 RAL-382 2902 chr3R 14684166 14684183 chr3R 14684541 14684558 11 374 2.5 15.0 8.8 1.1 392 chr3R 14684166 intron Meltrin - chr3R 14684362 intron Meltrin - chr3R 14684558 intron Meltrin - chr3R_11_14680001 chr3R_14680001 RAL-382 2903 chr3R 14686195 14686259 chr3R 14686610 14686672 22 426 11.5 10.0 10.8 1.9 477 chr3R 14686195 intron Meltrin - chr3R 14686434 intron Meltrin - chr3R 14686672 intron Meltrin - chr3R_22_14685001 chr3R_14685001 RAL-382 2904 chr3R 14689574 14689585 chr3R 14689709 14689720 6 135 23.0 15.0 19.0 0.3 146 chr3R 14689574 intron Meltrin - chr3R 14689647 intron Meltrin - chr3R 14689720 intron Meltrin - chr3R_6_14685001 chr3R_14685001 RAL-382 2905 chr3R 14704340 14704408 chr3R 14704467 14704535 32 126 15.0 13.0 14.0 2.1 195 chr3R 14704340 intron kibra - chr3R 14704438 intron kibra - chr3R 14704535 intron kibra - chr3R_32_14700001 chr3R_14700001 RAL-382 2906 chr3R 14709646 14709723 chr3R 14709802 14709863 30 155 6.0 8.5 7.2 3.7 217 chr3R 14709646 intron kibra - chr3R 14709754 intron kibra - chr3R 14709863 intron kibra - chr3R_30_14705001 chr3R_14705001 RAL-382 2907 chr3R 14773462 14773497 chr3R 14773593 14773629 13 131 9.0 4.0 6.5 1.7 167 chr3R 14773462 intron jvl + chr3R 14773546 intron jvl + chr3R 14773629 intron jvl + chr3R_13_14770001 chr3R_14770001 RAL-382 2908 chr3R 14775987 14776021 chr3R 14776097 14776162 4 133 46.5 43.0 44.8 0.1 175 chr3R 14775987 intron jvl + chr3R 14776074 intron jvl + chr3R 14776162 intron jvl + chr3R_4_14775001 chr3R_14775001 RAL-382 2909 chr3R 14824489 14824567 chr3R 14824633 14824703 23 137 10.0 2.5 6.2 3.2 214 chr3R 14824489 intron btsz - chr3R 14824596 intron btsz - chr3R 14824703 intron btsz - chr3R_23_14820001 chr3R_14820001 RAL-382 2910 chr3R 14840907 14840972 chr3R 14841043 14841087 12 125 10.0 7.0 8.5 1.3 180 chr3R 14840907 intron btsz - chr3R 14840997 intron btsz - chr3R 14841087 intron btsz - chr3R_12_14840001 chr3R_14840001 RAL-382 2911 chr3R 14898429 14898502 chr3R 14898599 14898660 39 169 11.5 6.0 8.8 4.0 231 chr3R 14898429 intergenic Nup93-2 -,CG3817 + chr3R 14898544 intergenic Nup93-2 -,CG3817 + chr3R 14898660 intergenic CG3817 +,Nup93-2 - chr3R_39_14895001 chr3R_14895001 RAL-382 2912 chr3R 14911533 14911595 chr3R 14911673 14911751 17 145 0.0 5.0 2.5 4.9 218 chr3R 14911533 intergenic not near genes chr3R 14911642 intergenic not near genes chr3R 14911751 intergenic not near genes chr3R_17_14910001 chr3R_14910001 RAL-382 2913 chr3R 14944853 14944888 chr3R 14944984 14944989 9 128 17.5 10.0 13.8 0.6 136 chr3R 14944853 intergenic not near genes chr3R 14944921 intergenic not near genes chr3R 14944989 intergenic not near genes chr3R_9_14940001 chr3R_14940001 RAL-382 2914 chr3R 14973542 14973607 chr3R 14974076 14974146 24 537 10.0 9.5 9.8 2.2 604 chr3R 14973542 intergenic not near genes chr3R 14973844 intergenic not near genes chr3R 14974146 intergenic not near genes chr3R_24_14970001 chr3R_14970001 RAL-382 2915 chr3R 15006817 15006883 chr3R 15007246 15007312 21 424 6.5 13.0 9.8 1.9 495 chr3R 15006817 intergenic not near genes chr3R 15007064 intergenic not near genes chr3R 15007312 intergenic not near genes chr3R_21_15005001 chr3R_15005001 RAL-382 2916 chr3R 15032455 15032463 chr3R 15032592 15032600 5 137 0.0 12.5 6.2 0.7 145 chr3R 15032455 intergenic not near genes chr3R 15032528 intergenic not near genes chr3R 15032600 intergenic not near genes chr3R_5_15030001 chr3R_15030001 RAL-382 2917 chr3R 15036955 15037030 chr3R 15037089 15037148 26 131 6.5 7.5 7.0 3.2 193 chr3R 15036955 intergenic RpL10Aa + chr3R 15037052 intergenic RpL10Aa + chr3R 15037148 intergenic RpL10Aa + chr3R_26_15035001 chr3R_15035001 RAL-382 2918 chr3R 15041386 15041419 chr3R 15045203 15045237 Doc 16 3818 17.5 0.5 9.0 1.6 3851 chr3R 15041386 intergenic not near genes chr3R 15043312 intergenic not near genes chr3R 15045237 intergenic not near genes chr3R_16_15040001 chr3R_15040001 RAL-382 2919 chr3R 15041424 15041450 chr3R 15045242 15045268 Doc 12 3818 7.5 3.5 5.5 1.8 3844 chr3R 15041424 intergenic not near genes chr3R 15043346 intergenic not near genes chr3R 15045268 intergenic not near genes chr3R_12_15040001 chr3R_15040001 RAL-382 2920 chr3R 15049405 15049483 chr3R 15049581 15049658 27 174 8.0 10.0 9.0 2.7 253 chr3R 15049405 intergenic not near genes chr3R 15049532 intergenic not near genes chr3R 15049658 intergenic not near genes chr3R_27_15045001 chr3R_15045001 RAL-382 2921 chr3R 15059238 15059299 chr3R 15059499 15059558 BS 8 260 0.0 3.0 1.5 3.2 320 chr3R 15059238 intron dpr9 - chr3R 15059398 intron dpr9 - chr3R 15059558 intron dpr9 - chr3R_8_15055001 chr3R_15055001 RAL-382 2922 chr3R 15071149 15071211 chr3R 15071324 15071386 20 175 10.0 7.5 8.8 2.0 237 chr3R 15071149 intron dpr9 - chr3R 15071268 intron dpr9 - chr3R 15071386 intron dpr9 - chr3R_20_15070001 chr3R_15070001 RAL-382 2923 chr3R 15075833 15075841 chr3R 15075960 15075968 4 127 16.5 0.0 8.2 0.4 135 chr3R 15075833 intron dpr9 - chr3R 15075900 intron dpr9 - chr3R 15075968 intron dpr9 - chr3R_4_15075001 chr3R_15075001 RAL-382 2924 chr3R 15075845 15075873 chr3R 15075954 15076000 7 123 11.0 0.0 5.5 1.1 155 chr3R 15075845 intron dpr9 - chr3R 15075922 intron dpr9 - chr3R 15076000 intron dpr9 - chr3R_7_15075001 chr3R_15075001 RAL-382 2925 chr3R 15079763 15079839 chr3R 15080054 15080123 pogo 34 287 8.5 1.0 4.8 5.9 360 chr3R 15079763 3` UTR CG6966 - chr3R 15079943 3` UTR CG6966 - chr3R 15080123 3` UTR CG6966 - chr3R_34_15075001 chr3R_15075001 RAL-382 2926 chr3R 15087183 15087212 chr3R 15087311 15087340 5 125 9.0 7.0 8.0 0.6 157 chr3R 15087183 intron CG6966 - chr3R 15087262 intron CG6966 - chr3R 15087340 intron CG6966 - chr3R_5_15085001 chr3R_15085001 RAL-382 2927 chr3R 15102451 15102523 chr3R 15109758 15109828 412 31 7307 11.5 11.0 11.2 2.5 7377 chr3R 15102451 intron CG42788 - chr3R 15106140 intron CG42788 - chr3R 15109828 intron CG42788 - chr3R_31_15105001 chr3R_15105001 RAL-382 2928 chr3R 15114866 15114946 chr3R 15114992 15115016 19 123 7.0 8.5 7.8 2.2 150 chr3R 15114866 intron CG42788 - chr3R 15114941 intron CG42788 - chr3R 15115016 intron CG42788 - chr3R_19_15110001 chr3R_15110001 RAL-382 2929 chr3R 15127733 15127806 chr3R 15127863 15127936 16 130 9.5 14.0 11.8 1.2 203 chr3R 15127733 intron CG42788 - chr3R 15127834 intron CG42788 - chr3R 15127936 intron CG42788 - chr3R_16_15125001 chr3R_15125001 RAL-382 2930 chr3R 15132015 15132078 chr3R 15135125 15135189 Juan 25 3110 6.5 12.0 9.2 2.5 3174 chr3R 15132015 intergenic CG42788 - chr3R 15133602 intergenic not near genes chr3R 15135189 exon CG6912 - chr3R_25_15130001 chr3R_15130001 RAL-382 2931 chr3R 15143880 15143944 chr3R 15144113 15144177 4 233 46.0 44.5 45.2 0.1 297 chr3R 15143880 intron GlyS - chr3R 15144028 intron GlyS - chr3R 15144177 intron GlyS - chr3R_4_15140001 chr3R_15140001 RAL-382 2932 chr3R 15156564 15156632 chr3R 15156695 15156762 13 130 9.5 7.5 8.5 1.4 198 chr3R 15156564 intron Gyc88E + chr3R 15156663 intron Gyc88E + chr3R 15156762 intron Gyc88E + chr3R_13_15155001 chr3R_15155001 RAL-382 2933 chr3R 15162498 15162556 chr3R 15167316 15167374 F-element 15 4816 9.5 4.5 7.0 1.9 4876 chr3R 15162498 intron Gyc88E + chr3R 15164936 intron Gyc88E + chr3R 15167374 intron Gyc88E + chr3R_15_15160001 chr3R_15160001 RAL-382 2934 chr3R 15167763 15167836 chr3R 15167970 15168009 24 204 10.0 6.5 8.2 2.6 246 chr3R 15167763 intron Gyc88E + chr3R 15167886 intron Gyc88E + chr3R 15168009 intron Gyc88E + chr3R_24_15165001 chr3R_15165001 RAL-382 2935 chr3R 15169367 15169377 chr3R 15169504 15169516 11 138 78.0 74.0 76.0 0.1 149 chr3R 15169367 intron Gyc88E + chr3R 15169442 intron Gyc88E + chr3R 15169516 intron Gyc88E + chr3R_11_15165001 chr3R_15165001 RAL-382 2936 chr3R 15169343 15169390 chr3R 15169517 15169535 19 142 80.5 69.5 75.0 0.2 192 chr3R 15169343 intron Gyc88E + chr3R 15169439 intron Gyc88E + chr3R 15169535 intron Gyc88E + chr3R_19_15165001 chr3R_15165001 RAL-382 2937 chr3R 15265452 15265483 chr3R 15265583 15265606 9 128 22.0 16.0 19.0 0.5 154 chr3R 15265452 intergenic Oscp +,Set + chr3R 15265529 intergenic Oscp +,Set + chr3R 15265606 5` UTR Oscp + chr3R_9_15265001 chr3R_15265001 RAL-382 2938 chr3R 15265490 15265525 chr3R 15265580 15265656 12 120 13.0 15.5 14.2 0.8 166 chr3R 15265490 intergenic Oscp +,Set + chr3R 15265573 intergenic Oscp +,Set + chr3R 15265656 5` UTR Oscp + chr3R_12_15265001 chr3R_15265001 RAL-382 2939 chr3R 15416208 15416271 chr3R 15416338 15416389 40 128 9.5 11.5 10.5 3.5 181 chr3R 15416208 3` UTR Atx2 + chr3R 15416298 3` UTR Atx2 + chr3R 15416389 3` UTR Atx2 + chr3R_40_15415001 chr3R_15415001 RAL-382 2940 chr3R 15438354 15438367 chr3R 15438486 15438498 5 132 5.0 13.5 9.2 0.5 144 chr3R 15438354 intergenic not near genes chr3R 15438426 intergenic not near genes chr3R 15438498 intergenic not near genes chr3R_5_15435001 chr3R_15435001 RAL-382 2941 chr3R 15445861 15445904 chr3R 15445996 15446039 15 135 10.5 4.0 7.2 1.8 178 chr3R 15445861 exon AdamTS-A - chr3R 15445950 intron AdamTS-A - chr3R 15446039 intron AdamTS-A - chr3R_15_15445001 chr3R_15445001 RAL-382 2942 chr3R 15517556 15517625 chr3R 15517689 15517717 17 123 9.5 6.5 8.0 1.9 161 chr3R 15517556 intergenic not near genes chr3R 15517636 intergenic not near genes chr3R 15517717 intergenic not near genes chr3R_17_15515001 chr3R_15515001 RAL-382 2943 chr3R 15571199 15571496 chr3R 15571349 15571637 53 148 10.0 10.5 10.2 4.7 438 chr3R 15571199 intergenic not near genes chr3R 15571418 intergenic not near genes chr3R 15571637 intergenic not near genes chr3R_53_15570001 chr3R_15570001 RAL-382 2944 chr3R 15576390 15576405 chr3R 15576523 15576538 4 133 8.0 13.5 10.8 0.3 148 chr3R 15576390 intergenic not near genes chr3R 15576464 intergenic not near genes chr3R 15576538 intergenic not near genes chr3R_4_15575001 chr3R_15575001 RAL-382 2945 chr3R 15601127 15601189 chr3R 15608699 15608761 412 22 7570 6.5 8.5 7.5 2.6 7634 chr3R 15601127 intergenic not near genes chr3R 15604944 intergenic not near genes chr3R 15608761 intergenic not near genes chr3R_22_15600001 chr3R_15600001 RAL-382 2946 chr3R 15610513 15610586 chr3R 15610639 15610712 7 126 8.0 8.5 8.2 0.8 199 chr3R 15610513 intergenic not near genes chr3R 15610612 intergenic not near genes chr3R 15610712 intergenic not near genes chr3R_7_15610001 chr3R_15610001 RAL-382 2947 chr3R 15618712 15618762 chr3R 15626208 15626281 blood 20 7517 4.0 9.5 6.8 2.6 7569 chr3R 15618712 intergenic not near genes chr3R 15622496 intergenic not near genes chr3R 15626281 intergenic not near genes chr3R_20_15620001 chr3R_15620001 RAL-382 2948 chr3R 15635166 15635236 chr3R 15635337 15635398 8 169 32.0 28.5 30.2 0.3 232 chr3R 15635166 intergenic CG43335 + chr3R 15635282 intergenic CG43335 + chr3R 15635398 intergenic CG43335 + chr3R_8_15635001 chr3R_15635001 RAL-382 2949 chr3R 15636483 15636488 chr3R 15636709 15636714 5 226 8.0 0.0 4.0 1.0 231 chr3R 15636483 exon CG43335 + chr3R 15636598 intergenic CG43335 + chr3R 15636714 intergenic CG43335 +,CG43336 + chr3R_5_15635001 chr3R_15635001 RAL-382 2950 chr3R 15639287 15639362 chr3R 15639623 15639698 21 330 7.5 8.0 7.8 2.4 411 chr3R 15639287 intergenic not near genes chr3R 15639492 intergenic not near genes chr3R 15639698 intergenic not near genes chr3R_21_15635001 chr3R_15635001 RAL-382 2951 chr3R 15676505 15676568 chr3R 15676634 15676697 6 129 21.0 22.0 21.5 0.3 192 chr3R 15676505 intron pxb + chr3R 15676601 intron pxb + chr3R 15676697 intron pxb + chr3R_6_15675001 chr3R_15675001 RAL-382 2952 chr3R 15691132 15691304 chr3R 15691287 15691441 29 148 0.0 0.0 0.0 29.0 309 chr3R 15691132 intergenic not near genes chr3R 15691286 intergenic not near genes chr3R 15691441 intergenic not near genes chr3R_29_15690001 chr3R_15690001 RAL-382 2953 chr3R 15709591 15709661 chr3R 15709770 15709829 13 175 5.5 6.0 5.8 1.9 238 chr3R 15709591 intergenic not near genes chr3R 15709710 intergenic not near genes chr3R 15709829 intergenic not near genes chr3R_13_15705001 chr3R_15705001 RAL-382 2954 chr3R 15711227 15711283 chr3R 15711356 15711412 20 128 14.0 15.5 14.8 1.3 185 chr3R 15711227 intergenic not near genes chr3R 15711320 intergenic not near genes chr3R 15711412 intergenic not near genes chr3R_20_15710001 chr3R_15710001 RAL-382 2955 chr3R 15718379 15718449 chr3R 15724759 15724829 28 6380 37.5 31.5 34.5 0.8 6450 chr3R 15718379 intergenic not near genes chr3R 15721604 intergenic not near genes chr3R 15724829 intergenic not near genes chr3R_28_15720001 chr3R_15720001 RAL-382 2956 chr3R 15718271 15718325 chr3R 15724876 15724930 22 6605 46.5 38.5 42.5 0.5 6659 chr3R 15718271 intergenic not near genes chr3R 15721600 intergenic not near genes chr3R 15724930 intergenic not near genes chr3R_22_15720001 chr3R_15720001 RAL-382 2957 chr3R 15734168 15734190 chr3R 15734303 15734331 4 138 22.5 25.0 23.8 0.2 163 chr3R 15734168 intergenic not near genes chr3R 15734250 intergenic not near genes chr3R 15734331 intergenic not near genes chr3R_4_15730001 chr3R_15730001 RAL-382 2958 chr3R 15735192 15735235 chr3R 15739962 15740005 F-element 20 4770 6.5 7.0 6.8 2.6 4813 chr3R 15735192 intergenic not near genes chr3R 15737598 intergenic not near genes chr3R 15740005 intergenic not near genes chr3R_20_15735001 chr3R_15735001 RAL-382 2959 chr3R 15777646 15777715 chr3R 15777829 15777899 17 182 10.5 11.0 10.8 1.4 253 chr3R 15777646 intergenic CG4525 + chr3R 15777772 intergenic CG4525 + chr3R 15777899 intergenic CG4525 + chr3R_17_15775001 chr3R_15775001 RAL-382 2960 chr3R 15924877 15924952 chr3R 15925015 15925090 4 138 17.0 15.0 16.0 0.2 213 chr3R 15924877 intron CG4221 + chr3R 15924984 intron CG4221 + chr3R 15925090 intron CG4221 + chr3R_4_15920001 chr3R_15920001 RAL-382 2961 chr3R 16006019 16006091 chr3R 16006166 16006238 38 147 12.5 15.0 13.8 2.6 219 chr3R 16006019 intron CR42839 - chr3R 16006128 intron CR42839 - chr3R 16006238 intron CR42839 - chr3R_38_16005001 chr3R_16005001 RAL-382 2962 chr3R 16033370 16033430 chr3R 16033501 16033561 17 131 7.0 8.5 7.8 1.9 191 chr3R 16033370 intron pnr + chr3R 16033466 intron pnr + chr3R 16033561 intron pnr + chr3R_17_16030001 chr3R_16030001 RAL-382 2963 chr3R 16048816 16048823 chr3R 16048956 16048963 4 140 15.5 12.5 14.0 0.3 147 chr3R 16048816 intron ird5 - chr3R 16048890 intron ird5 - chr3R 16048963 intron ird5 - chr3R_4_16045001 chr3R_16045001 RAL-382 2964 chr3R 16048830 16048882 chr3R 16048945 16049015 26 137 7.0 11.5 9.2 2.5 185 chr3R 16048830 intron ird5 - chr3R 16048922 intron ird5 - chr3R 16049015 intron ird5 - chr3R_26_16045001 chr3R_16045001 RAL-382 2965 chr3R 16110906 16110950 chr3R 16111030 16111072 5 117 29.0 26.0 27.5 0.2 166 chr3R 16110906 intergenic not near genes chr3R 16110989 intergenic not near genes chr3R 16111072 intergenic not near genes chr3R_5_16110001 chr3R_16110001 RAL-382 2966 chr3R 16189381 16189437 chr3R 16189833 16189890 invader4 7 453 30.5 37.0 33.8 0.2 509 chr3R 16189381 intron sra + chr3R 16189636 intron sra + chr3R 16189890 intron sra + chr3R_7_16185001 chr3R_16185001 RAL-382 2967 chr3R 16210802 16210814 chr3R 16210938 16210950 5 136 8.5 9.5 9.0 0.5 148 chr3R 16210802 intergenic not near genes chr3R 16210876 intergenic not near genes chr3R 16210950 intergenic not near genes chr3R_5_16210001 chr3R_16210001 RAL-382 2968 chr3R 16215053 16215128 chr3R 16215207 16215278 31 155 12.0 10.5 11.2 2.5 225 chr3R 16215053 intergenic CR45641 + chr3R 16215166 intergenic CR45641 + chr3R 16215278 intergenic CR45641 + chr3R_31_16215001 chr3R_16215001 RAL-382 2969 chr3R 16226759 16226791 chr3R 16226887 16226919 13 128 10.0 16.0 13.0 0.9 160 chr3R 16226759 intron tara + chr3R 16226839 intron tara + chr3R 16226919 intron tara + chr3R_13_16225001 chr3R_16225001 RAL-382 2970 chr3R 16246474 16246543 chr3R 16246598 16246669 15 125 5.0 12.5 8.8 1.5 195 chr3R 16246474 intron tara + chr3R 16246572 intron tara + chr3R 16246669 intron tara + chr3R_15_16245001 chr3R_16245001 RAL-382 2971 chr3R 16332727 16332803 chr3R 16333128 16333143 39 397 9.0 4.0 6.5 5.2 416 chr3R 16332727 intron Sulf1 - chr3R 16332935 intron Sulf1 - chr3R 16333143 intron Sulf1 - chr3R_39_16330001 chr3R_16330001 RAL-382 2972 chr3R 16374254 16374319 chr3R 16374421 16374486 26 166 10.5 10.0 10.2 2.3 232 chr3R 16374254 intergenic ss - chr3R 16374370 intergenic ss - chr3R 16374486 3` UTR ss - chr3R_26_16370001 chr3R_16370001 RAL-382 2973 chr3R 16472556 16472584 chr3R 16472667 16472669 5 105 14.0 15.0 14.5 0.3 113 chr3R 16472556 intergenic Gyc-89Da + chr3R 16472612 5` UTR Gyc-89Da + chr3R 16472669 5` UTR Gyc-89Da + chr3R_5_16470001 chr3R_16470001 RAL-382 2974 chr3R 16472588 16472597 chr3R 16472654 16472664 4 74 16.5 15.0 15.8 0.2 76 chr3R 16472588 intergenic Gyc-89Da + chr3R 16472626 5` UTR Gyc-89Da + chr3R 16472664 5` UTR Gyc-89Da + chr3R_4_16470001 chr3R_16470001 RAL-382 2975 chr3R 16534406 16534454 chr3R 16534544 16534592 19 138 14.0 8.5 11.2 1.6 186 chr3R 16534406 intron CG42342 + chr3R 16534499 intron CG42342 + chr3R 16534592 intron CG42342 + chr3R_19_16530001 chr3R_16530001 RAL-382 2976 chr3R 16582859 16582919 chr3R 16582988 16583018 14 126 2.0 12.0 7.0 1.8 159 chr3R 16582859 intron Scp2 - chr3R 16582938 intron Scp2 - chr3R 16583018 intron Scp2 - chr3R_14_16580001 chr3R_16580001 RAL-382 2977 chr3R 16633664 16633680 chr3R 16633802 16633810 8 146 15.0 9.0 12.0 0.6 146 chr3R 16633664 intron Fas1 + chr3R 16633737 intron Fas1 + chr3R 16633810 intron Fas1 + chr3R_8_16630001 chr3R_16630001 RAL-382 2978 chr3R 16671459 16671527 chr3R 16671595 16671643 24 124 7.0 7.0 7.0 3.0 184 chr3R 16671459 intron Ubx - chr3R 16671551 intron Ubx - chr3R 16671643 intron Ubx - chr3R_24_16670001 chr3R_16670001 RAL-382 2979 chr3R 16731891 16731946 chr3R 16732012 16732042 11 118 4.5 5.5 5.0 1.8 151 chr3R 16731891 intron Ubx - chr3R 16731966 intron Ubx - chr3R 16732042 intron Ubx - chr3R_11_16730001 chr3R_16730001 RAL-382 2980 chr3R 16756292 16756354 chr3R 16762515 16762564 diver 9 6228 3.0 4.5 3.8 1.9 6272 chr3R 16756292 intron bxd - chr3R 16759428 intron bxd - chr3R 16762564 intron bxd - chr3R_9_16755001 chr3R_16755001 RAL-382 2981 chr3R 16771570 16771644 chr3R 16771696 16771754 35 122 12.5 9.0 10.8 3.0 184 chr3R 16771570 intron bxd - chr3R 16771662 intron bxd - chr3R 16771754 intron bxd - chr3R_35_16770001 chr3R_16770001 RAL-382 2982 chr3R 16849668 16849745 chr3R 16849819 16849872 20 148 5.5 7.0 6.2 2.8 204 chr3R 16849668 intron iab-8 - chr3R 16849770 intron iab-8 - chr3R 16849872 intron iab-8 - chr3R_20_16845001 chr3R_16845001 RAL-382 2983 chr3R 16860285 16860362 chr3R 16860413 16860449 25 125 8.0 0.5 4.2 4.8 164 chr3R 16860285 intron iab-8 - chr3R 16860367 intron iab-8 - chr3R 16860449 intron iab-8 - chr3R_25_16860001 chr3R_16860001 RAL-382 2984 chr3R 16874376 16874431 chr3R 16874503 16874557 12 127 15.0 10.0 12.5 0.9 181 chr3R 16874376 intron iab-8 - chr3R 16874466 intron iab-8 - chr3R 16874557 intron iab-8 - chr3R_12_16870001 chr3R_16870001 RAL-382 2985 chr3R 17099522 17099546 chr3R 17099648 17099672 12 124 19.5 12.5 16.0 0.7 150 chr3R 17099522 intron cher - chr3R 17099597 intron cher - chr3R 17099672 intron cher - chr3R_12_17095001 chr3R_17095001 RAL-382 2986 chr3R 17101093 17101128 chr3R 17101223 17101258 13 130 12.0 0.0 6.0 1.9 165 chr3R 17101093 intron cher - chr3R 17101176 intron cher - chr3R 17101258 intron cher - chr3R_13_17100001 chr3R_17100001 RAL-382 2987 chr3R 17184687 17184756 chr3R 17184813 17184882 42 125 10.5 11.5 11.0 3.5 195 chr3R 17184687 intron Mur89F - chr3R 17184784 intron Mur89F - chr3R 17184882 intron Mur89F - chr3R_42_17180001 chr3R_17180001 RAL-382 2988 chr3R 17209663 17209702 chr3R 17209801 17209840 18 137 12.0 16.0 14.0 1.2 177 chr3R 17209663 intergenic not near genes chr3R 17209752 intergenic not near genes chr3R 17209840 intergenic not near genes chr3R_18_17205001 chr3R_17205001 RAL-382 2989 chr3R 17213980 17214057 chr3R 17214099 17214153 11 113 7.5 11.0 9.2 1.1 173 chr3R 17213980 intergenic not near genes chr3R 17214066 intergenic not near genes chr3R 17214153 intergenic not near genes chr3R_11_17210001 chr3R_17210001 RAL-382 2990 chr3R 17242620 17242695 chr3R 17242752 17242823 27 131 8.5 8.5 8.5 2.8 203 chr3R 17242620 intron beat-IIb - chr3R 17242722 intron beat-IIb - chr3R 17242823 intron beat-IIb - chr3R_27_17240001 chr3R_17240001 RAL-382 2991 chr3R 17268642 17268649 chr3R 17268814 17268821 4 172 0.0 9.0 4.5 0.7 179 chr3R 17268642 intergenic not near genes chr3R 17268732 intergenic not near genes chr3R 17268821 intergenic not near genes chr3R_4_17265001 chr3R_17265001 RAL-382 2992 chr3R 17268650 17268702 chr3R 17268807 17268873 22 170 0.0 8.5 4.2 4.2 223 chr3R 17268650 intergenic not near genes chr3R 17268762 intergenic not near genes chr3R 17268873 intergenic not near genes chr3R_22_17265001 chr3R_17265001 RAL-382 2993 chr3R 17294638 17294690 chr3R 17295105 17295168 BS 17 474 7.5 11.0 9.2 1.7 530 chr3R 17294638 intergenic not near genes chr3R 17294903 intergenic not near genes chr3R 17295168 intergenic not near genes chr3R_17_17290001 chr3R_17290001 RAL-382 2994 chr3R 17320508 17320804 chr3R 17320634 17320889 37 132 10.5 8.5 9.5 3.5 381 chr3R 17320508 3` UTR beat-IIa - chr3R 17320698 3` UTR beat-IIa - chr3R 17320889 exon beat-IIa - chr3R_37_17320001 chr3R_17320001 RAL-382 2995 chr3R 17335110 17335186 chr3R 17335236 17335312 19 126 9.5 7.5 8.5 2.0 202 chr3R 17335110 intron beat-IIa - chr3R 17335211 intron beat-IIa - chr3R 17335312 intron beat-IIa - chr3R_19_17335001 chr3R_17335001 RAL-382 2996 chr3R 17346650 17346715 chr3R 17348263 17348328 F-element 27 1613 8.0 12.5 10.2 2.4 1678 chr3R 17346650 intron beat-IIa - chr3R 17347489 intron beat-IIa - chr3R 17348328 intron beat-IIa - chr3R_27_17345001 chr3R_17345001 RAL-382 2997 chr3R 17355447 17355515 chr3R 17355575 17355643 24 121 5.5 5.0 5.2 3.9 196 chr3R 17355447 intron beat-IIa - chr3R 17355545 intron beat-IIa - chr3R 17355643 intron beat-IIa - chr3R_24_17355001 chr3R_17355001 RAL-382 2998 chr3R 17467560 17467621 chr3R 17467721 17467782 19 160 2.5 8.0 5.2 3.1 222 chr3R 17467560 intergenic not near genes chr3R 17467671 intergenic not near genes chr3R 17467782 intergenic not near genes chr3R_19_17465001 chr3R_17465001 RAL-382 2999 chr3R 17497917 17497983 chr3R 17498053 17498119 30 135 8.5 15.0 11.8 2.3 202 chr3R 17497917 intron Dscam3 - chr3R 17498018 intron Dscam3 - chr3R 17498119 intron Dscam3 - chr3R_30_17495001 chr3R_17495001 RAL-382 3000 chr3R 17506310 17506392 chr3R 17506438 17506520 16 128 10.0 7.5 8.8 1.6 210 chr3R 17506310 intergenic not near genes chr3R 17506415 intergenic not near genes chr3R 17506520 intergenic not near genes chr3R_16_17505001 chr3R_17505001 RAL-382 3001 chr3R 17509218 17509237 chr3R 17516809 17516823 412 6 7589 5.0 6.5 5.8 0.9 7605 chr3R 17509218 intergenic not near genes chr3R 17513020 intergenic not near genes chr3R 17516823 intergenic not near genes chr3R_6_17510001 chr3R_17510001 RAL-382 3002 chr3R 17509242 17509253 chr3R 17516805 17516834 412 4 7580 2.5 6.0 4.2 0.8 7592 chr3R 17509242 intergenic not near genes chr3R 17513038 intergenic not near genes chr3R 17516834 intergenic not near genes chr3R_4_17510001 chr3R_17510001 RAL-382 3003 chr3R 17521517 17521583 chr3R 17521719 17521756 12 198 2.5 6.5 4.5 2.2 239 chr3R 17521517 intergenic not near genes chr3R 17521636 intergenic not near genes chr3R 17521756 intergenic not near genes chr3R_12_17520001 chr3R_17520001 RAL-382 3004 chr3R 17524921 17524926 chr3R 17525051 17525056 6 130 0.0 7.0 3.5 1.3 135 chr3R 17524921 intergenic not near genes chr3R 17524988 intergenic not near genes chr3R 17525056 intergenic not near genes chr3R_6_17520001 chr3R_17520001 RAL-382 3005 chr3R 17565558 17565634 chr3R 17565697 17565773 19 133 7.0 5.5 6.2 2.6 215 chr3R 17565558 exon Hmx + chr3R 17565666 intron Hmx + chr3R 17565773 intron Hmx + chr3R_19_17565001 chr3R_17565001 RAL-382 3006 chr3R 17569931 17569954 chr3R 17570041 17570083 5 125 9.5 5.0 7.2 0.6 152 chr3R 17569931 intergenic not near genes chr3R 17570007 intergenic not near genes chr3R 17570083 intergenic not near genes chr3R_5_17570001 chr3R_17570001 RAL-382 3007 chr3R 17569955 17569987 chr3R 17570039 17570116 14 121 6.0 5.0 5.5 2.2 161 chr3R 17569955 intergenic not near genes chr3R 17570036 intergenic not near genes chr3R 17570116 intergenic not near genes chr3R_14_17570001 chr3R_17570001 RAL-382 3008 chr3R 17591246 17591288 chr3R 17591732 17591774 F-element 9 483 16.0 12.5 14.2 0.6 528 chr3R 17591246 intergenic not near genes chr3R 17591510 intergenic not near genes chr3R 17591774 intergenic not near genes chr3R_9_17590001 chr3R_17590001 RAL-382 3009 chr3R 17591289 17591314 chr3R 17591729 17591800 F-element 10 470 10.5 12.0 11.2 0.8 511 chr3R 17591289 intergenic not near genes chr3R 17591544 intergenic not near genes chr3R 17591800 intergenic not near genes chr3R_10_17590001 chr3R_17590001 RAL-382 3010 chr3R 17638275 17638338 chr3R 17638811 17638874 roo 37 536 15.0 14.5 14.8 2.3 599 chr3R 17638275 intron CG43175 + chr3R 17638574 intron CG43175 + chr3R 17638874 intron,intron CG43175 +,CR45222 + chr3R_37_17635001 chr3R_17635001 RAL-382 3011 chr3R 17655405 17655480 chr3R 17655550 17655625 21 141 4.5 7.0 5.8 3.1 220 chr3R 17655405 intron CG14322 + chr3R 17655515 intron CG14322 + chr3R 17655625 intron CG14322 + chr3R_21_17655001 chr3R_17655001 RAL-382 3012 chr3R 17725022 17725082 chr3R 17725166 17725212 15 137 4.0 0.0 2.0 5.0 190 chr3R 17725022 5` UTR Atg8b - chr3R 17725117 intergenic Atg8b - chr3R 17725212 intergenic Atg8b - chr3R_15_17725001 chr3R_17725001 RAL-382 3013 chr3R 17739147 17739210 chr3R 17739273 17739342 16 126 10.0 10.0 10.0 1.5 195 chr3R 17739147 intron TyrRII + chr3R 17739244 intron TyrRII + chr3R 17739342 intron TyrRII + chr3R_16_17735001 chr3R_17735001 RAL-382 3014 chr3R 17811146 17811177 chr3R 17811276 17811307 4 124 12.0 1.5 6.8 0.5 161 chr3R 17811146 intergenic CG18012 -,tinc + chr3R 17811226 intergenic CG18012 -,tinc + chr3R 17811307 intergenic CG18012 -,tinc + chr3R_4_17810001 chr3R_17810001 RAL-382 3015 chr3R 17823155 17823230 chr3R 17823282 17823355 34 126 11.5 10.0 10.8 2.9 200 chr3R 17823155 intron tinc + chr3R 17823255 intron tinc + chr3R 17823355 intron tinc + chr3R_34_17820001 chr3R_17820001 RAL-382 3016 chr3R 17825869 17825929 chr3R 17825998 17826061 10 130 0.0 6.5 3.2 2.4 192 chr3R 17825869 intron tinc + chr3R 17825965 intron tinc + chr3R 17826061 intron tinc + chr3R_10_17825001 chr3R_17825001 RAL-382 3017 chr3R 17833187 17833246 chr3R 17833309 17833380 16 133 6.0 9.0 7.5 1.9 193 chr3R 17833187 intron tinc + chr3R 17833284 intron tinc + chr3R 17833380 intron tinc + chr3R_16_17830001 chr3R_17830001 RAL-382 3018 chr3R 17840401 17840420 chr3R 17840528 17840547 7 127 8.5 23.0 15.8 0.4 146 chr3R 17840401 intron tinc + chr3R 17840474 intron tinc + chr3R 17840547 intron tinc + chr3R_7_17840001 chr3R_17840001 RAL-382 3019 chr3R 17861081 17861164 chr3R 17861225 17861309 24 144 7.0 0.0 3.5 5.3 228 chr3R 17861081 intron tinc + chr3R 17861195 intron tinc + chr3R 17861309 intron tinc + chr3R_24_17860001 chr3R_17860001 RAL-382 3020 chr3R 17895272 17895339 chr3R 17895431 17895500 17 161 7.5 5.5 6.5 2.3 228 chr3R 17895272 intron Rim - chr3R 17895386 intron Rim - chr3R 17895500 intron Rim - chr3R_17_17895001 chr3R_17895001 RAL-382 3021 chr3R 17899046 17899058 chr3R 17899174 17899186 7 128 13.5 10.5 12.0 0.5 140 chr3R 17899046 intron Rim - chr3R 17899116 intron Rim - chr3R 17899186 intron Rim - chr3R_7_17895001 chr3R_17895001 RAL-382 3022 chr3R 17924454 17924520 chr3R 17924670 17924740 27 216 5.5 7.5 6.5 3.6 286 chr3R 17924454 intron cpo + chr3R 17924597 intron cpo + chr3R 17924740 intron cpo + chr3R_27_17920001 chr3R_17920001 RAL-382 3023 chr3R 17925810 17925877 chr3R 17927327 17927354 hobo 9 1507 8.0 9.5 8.8 0.9 1544 chr3R 17925810 intron cpo + chr3R 17926582 intron cpo + chr3R 17927354 intron cpo + chr3R_9_17925001 chr3R_17925001 RAL-382 3024 chr3R 17955821 17955883 chr3R 17955970 17956032 4 149 0.0 8.5 4.2 0.8 211 chr3R 17955821 intron cpo + chr3R 17955926 intron cpo + chr3R 17956032 intron cpo + chr3R_4_17955001 chr3R_17955001 RAL-382 3025 chr3R 17966293 17966301 chr3R 17966420 17966428 6 127 7.5 2.5 5.0 1.0 135 chr3R 17966293 intron cpo + chr3R 17966360 intron cpo + chr3R 17966428 intron cpo + chr3R_6_17965001 chr3R_17965001 RAL-382 3026 chr3R 17968063 17968107 chr3R 17968191 17968234 18 128 12.5 0.5 6.5 2.4 171 chr3R 17968063 intron cpo + chr3R 17968148 intron cpo + chr3R 17968234 intron cpo + chr3R_18_17965001 chr3R_17965001 RAL-382 3027 chr3R 18032729 18032808 chr3R 18040452 18040531 opus 19 7723 2.5 7.5 5.0 3.2 7802 chr3R 18032729 intergenic not near genes chr3R 18036630 intergenic not near genes chr3R 18040531 intergenic not near genes chr3R_19_18035001 chr3R_18035001 RAL-382 3028 chr3R 18041706 18041753 chr3R 18041833 18041849 4 119 3.0 0.0 1.5 1.6 143 chr3R 18041706 intergenic not near genes chr3R 18041778 intergenic not near genes chr3R 18041849 intergenic not near genes chr3R_4_18040001 chr3R_18040001 RAL-382 3029 chr3R 18061407 18061447 chr3R 18061539 18061588 7 140 7.0 0.0 3.5 1.6 181 chr3R 18061407 intergenic not near genes chr3R 18061498 intergenic not near genes chr3R 18061588 intergenic not near genes chr3R_7_18060001 chr3R_18060001 RAL-382 3030 chr3R 18061570 18061587 chr3R 18063194 18063211 F-element 5 1623 0.0 5.0 2.5 1.4 1641 chr3R 18061570 intergenic not near genes chr3R 18062390 intergenic not near genes chr3R 18063211 intergenic not near genes chr3R_5_18060001 chr3R_18060001 RAL-382 3031 chr3R 18078122 18078129 chr3R 18078235 18078258 5 126 19.0 1.5 10.2 0.4 136 chr3R 18078122 intergenic not near genes chr3R 18078190 intergenic not near genes chr3R 18078258 intergenic not near genes chr3R_5_18075001 chr3R_18075001 RAL-382 3032 chr3R 18105798 18105858 chr3R 18106087 18106147 24 287 6.0 7.5 6.8 3.1 349 chr3R 18105798 intron sr + chr3R 18105972 intron sr + chr3R 18106147 intron sr + chr3R_24_18105001 chr3R_18105001 RAL-382 3033 chr3R 18107117 18107140 chr3R 18107250 18107273 11 133 0.0 18.5 9.2 1.1 156 chr3R 18107117 intron sr + chr3R 18107195 intron sr + chr3R 18107273 intron sr + chr3R_11_18105001 chr3R_18105001 RAL-382 3034 chr3R 18107607 18107621 chr3R 18107704 18107771 5 118 8.0 3.0 5.5 0.8 164 chr3R 18107607 intron sr + chr3R 18107689 intron sr + chr3R 18107771 intron sr + chr3R_5_18105001 chr3R_18105001 RAL-382 3035 chr3R 18126162 18126229 chr3R 18126291 18126358 22 127 10.0 8.0 9.0 2.2 196 chr3R 18126162 intron sr + chr3R 18126260 intron sr + chr3R 18126358 intron sr + chr3R_22_18125001 chr3R_18125001 RAL-382 3036 chr3R 18143446 18143512 chr3R 18143583 18143650 19 137 6.0 0.0 3.0 4.8 204 chr3R 18143446 intergenic not near genes chr3R 18143548 intergenic not near genes chr3R 18143650 intergenic not near genes chr3R_19_18140001 chr3R_18140001 RAL-382 3037 chr3R 18211898 18211914 chr3R 18212056 18212063 7 157 0.0 11.5 5.8 1.0 165 chr3R 18211898 intron CG7985 + chr3R 18211980 intron CG7985 + chr3R 18212063 intron CG7985 + chr3R_7_18210001 chr3R_18210001 RAL-382 3038 chr3R 18345259 18345266 chr3R 18345702 18345709 6 442 0.0 31.0 15.5 0.4 450 chr3R 18345259 intron CG15803 - chr3R 18345484 intron CG15803 - chr3R 18345709 intron CG15803 - chr3R_6_18345001 chr3R_18345001 RAL-382 3039 chr3R 18346316 18346326 chr3R 18346486 18346496 6 170 15.5 1.5 8.5 0.6 180 chr3R 18346316 intron CG15803 - chr3R 18346406 intron CG15803 - chr3R 18346496 intron CG15803 - chr3R_6_18345001 chr3R_18345001 RAL-382 3040 chr3R 18346335 18346387 chr3R 18346485 18346557 12 162 10.0 1.5 5.8 1.8 222 chr3R 18346335 intron CG15803 - chr3R 18346446 intron CG15803 - chr3R 18346557 intron CG15803 - chr3R_12_18345001 chr3R_18345001 RAL-382 3041 chr3R 18352534 18352599 chr3R 18352677 18352742 23 143 5.5 11.0 8.2 2.5 208 chr3R 18352534 intron CG15803 - chr3R 18352638 intron CG15803 - chr3R 18352742 3` UTR CG15803 - chr3R_23_18350001 chr3R_18350001 RAL-382 3042 chr3R 18379581 18379651 chr3R 18379934 18380007 22 355 6.0 8.0 7.0 2.8 426 chr3R 18379581 intron CG7675 - chr3R 18379794 intron CG7675 - chr3R 18380007 intron CG7675 - chr3R_22_18375001 chr3R_18375001 RAL-382 3043 chr3R 18464362 18464400 chr3R 18464490 18464526 5 127 4.0 6.5 5.2 0.8 164 chr3R 18464362 intron fru - chr3R 18464444 intron fru - chr3R 18464526 intron fru - chr3R_5_18460001 chr3R_18460001 RAL-382 3044 chr3R 18472237 18472298 chr3R 18472388 18472449 32 151 8.0 11.5 9.8 3.0 212 chr3R 18472237 intron fru - chr3R 18472343 intron fru - chr3R 18472449 intron fru - chr3R_32_18470001 chr3R_18470001 RAL-382 3045 chr3R 18473173 18473179 chr3R 18473322 18473328 4 149 4.5 0.0 2.2 1.2 155 chr3R 18473173 intron fru - chr3R 18473250 intron fru - chr3R 18473328 intron fru - chr3R_4_18470001 chr3R_18470001 RAL-382 3046 chr3R 18481152 18481210 chr3R 18481291 18481343 17 136 0.0 12.0 6.0 2.4 191 chr3R 18481152 intron fru - chr3R 18481248 intron fru - chr3R 18481343 intron fru - chr3R_17_18480001 chr3R_18480001 RAL-382 3047 chr3R 18485385 18485458 chr3R 18485536 18485610 18 150 7.5 2.0 4.8 3.1 225 chr3R 18485385 intron fru - chr3R 18485498 intron fru - chr3R 18485610 intron fru - chr3R_18_18485001 chr3R_18485001 RAL-382 3048 chr3R 18496629 18496637 chr3R 18496758 18496766 5 129 8.5 9.0 8.8 0.5 137 chr3R 18496629 intron fru - chr3R 18496698 intron fru - chr3R 18496766 intron fru - chr3R_5_18495001 chr3R_18495001 RAL-382 3049 chr3R 18496639 18496658 chr3R 18496752 18496787 9 125 5.0 8.5 6.8 1.2 148 chr3R 18496639 intron fru - chr3R 18496713 intron fru - chr3R 18496787 intron fru - chr3R_9_18495001 chr3R_18495001 RAL-382 3050 chr3R 18500698 18500737 chr3R 18500869 18500908 11 168 9.5 9.5 9.5 1.0 210 chr3R 18500698 intron fru - chr3R 18500803 intron fru - chr3R 18500908 intron fru - chr3R_11_18500001 chr3R_18500001 RAL-382 3051 chr3R 18508566 18508609 chr3R 18508672 18508748 15 130 0.0 8.0 4.0 3.0 182 chr3R 18508566 intron fru - chr3R 18508657 intron fru - chr3R 18508748 intron fru - chr3R_15_18505001 chr3R_18505001 RAL-382 3052 chr3R 18538313 18538367 chr3R 18538448 18538497 20 132 9.5 2.0 5.8 2.9 184 chr3R 18538313 intron fru - chr3R 18538405 intron fru - chr3R 18538497 intron fru - chr3R_20_18535001 chr3R_18535001 RAL-382 3053 chr3R 18567242 18567256 chr3R 18567369 18567383 5 125 17.5 7.0 12.2 0.4 141 chr3R 18567242 intergenic not near genes chr3R 18567312 intergenic not near genes chr3R 18567383 intergenic not near genes chr3R_5_18565001 chr3R_18565001 RAL-382 3054 chr3R 18567257 18567301 chr3R 18567360 18567428 18 120 11.5 6.5 9.0 1.8 171 chr3R 18567257 intergenic not near genes chr3R 18567342 intergenic not near genes chr3R 18567428 intergenic not near genes chr3R_18_18565001 chr3R_18565001 RAL-382 3055 chr3R 18603896 18603964 chr3R 18604023 18604091 23 127 10.0 7.0 8.5 2.4 195 chr3R 18603896 intron,intron qin +,CG14304 - chr3R 18603994 intron,intron qin +,CG14304 - chr3R 18604091 intron,intron qin +,CG14304 - chr3R_23_18600001 chr3R_18600001 RAL-382 3056 chr3R 18606461 18606473 chr3R 18610743 18610755 F-element 6 4282 20.0 14.0 17.0 0.3 4294 chr3R 18606461 intron,intron qin +,CG14304 - chr3R 18608608 intron,intron qin +,CG14304 - chr3R 18610755 intron,intron qin +,CG14304 - chr3R_6_18605001 chr3R_18605001 RAL-382 3057 chr3R 18606475 18606522 chr3R 18610741 18610804 F-element 23 4279 11.0 13.0 12.0 1.8 4329 chr3R 18606475 intron,intron qin +,CG14304 - chr3R 18608640 intron,intron qin +,CG14304 - chr3R 18610804 intron,intron qin +,CG14304 - chr3R_23_18605001 chr3R_18605001 RAL-382 3058 chr3R 18618229 18618294 chr3R 18618364 18618406 29 134 6.5 6.5 6.5 3.9 177 chr3R 18618229 intron,intron qin +,CG14304 - chr3R 18618318 intron,intron qin +,CG14304 - chr3R 18618406 intron,intron qin +,CG14304 - chr3R_29_18615001 chr3R_18615001 RAL-382 3059 chr3R 18626012 18626045 chr3R 18626163 18626197 9 152 8.0 7.0 7.5 1.1 185 chr3R 18626012 intron qin + chr3R 18626104 intron qin + chr3R 18626197 intron qin + chr3R_9_18625001 chr3R_18625001 RAL-382 3060 chr3R 18626804 18626843 chr3R 18627003 18627042 10 199 14.5 4.5 9.5 1.0 238 chr3R 18626804 intron qin + chr3R 18626923 intron qin + chr3R 18627042 intron qin + chr3R_10_18625001 chr3R_18625001 RAL-382 3061 chr3R 18628827 18629035 chr3R 18629001 18629175 38 160 0.0 0.0 0.0 38.0 348 chr3R 18628827 intron qin + chr3R 18629001 intron qin + chr3R 18629175 intron,3` UTR qin +,CG14301 - chr3R_38_18625001 chr3R_18625001 RAL-382 3062 chr3R 18703233 18703313 chr3R 18703391 18703472 21 158 3.0 3.5 3.2 5.0 239 chr3R 18703233 intergenic not near genes chr3R 18703352 intergenic not near genes chr3R 18703472 intergenic not near genes chr3R_21_18700001 chr3R_18700001 RAL-382 3063 chr3R 18729983 18730032 chr3R 18730108 18730158 12 125 9.5 5.5 7.5 1.4 175 chr3R 18729983 exon Cha + chr3R 18730070 intron Cha + chr3R 18730158 exon Cha + chr3R_12_18730001 chr3R_18730001 RAL-382 3064 chr3R 18766735 18766802 chr3R 18766863 18766902 37 126 10.5 7.0 8.8 3.8 167 chr3R 18766735 intron CG7720 - chr3R 18766818 intron CG7720 - chr3R 18766902 intron CG7720 - chr3R_37_18765001 chr3R_18765001 RAL-382 3065 chr3R 18781647 18781653 chr3R 18781773 18781779 4 126 24.5 3.5 14.0 0.3 132 chr3R 18781647 intron CG7720 - chr3R 18781713 intron CG7720 - chr3R 18781779 intron CG7720 - chr3R_4_18780001 chr3R_18780001 RAL-382 3066 chr3R 18781660 18781718 chr3R 18781769 18781844 18 121 7.5 3.5 5.5 2.8 184 chr3R 18781660 intron CG7720 - chr3R 18781752 intron CG7720 - chr3R 18781844 intron CG7720 - chr3R_18_18780001 chr3R_18780001 RAL-382 3067 chr3R 18782712 18782748 chr3R 18782856 18782892 24 143 14.0 15.0 14.5 1.5 180 chr3R 18782712 intron CG7720 - chr3R 18782802 intron CG7720 - chr3R 18782892 intron CG7720 - chr3R_24_18780001 chr3R_18780001 RAL-382 3068 chr3R 18785827 18785896 chr3R 18785954 18786023 33 124 9.5 1.5 5.5 5.1 196 chr3R 18785827 intron CG7720 - chr3R 18785925 intron CG7720 - chr3R 18786023 intron CG7720 - chr3R_33_18785001 chr3R_18785001 RAL-382 3069 chr3R 18791468 18791504 chr3R 18791577 18791603 7 104 10.0 3.0 6.5 0.9 135 chr3R 18791468 intron CG7720 - chr3R 18791536 intron CG7720 - chr3R 18791603 intron CG7720 - chr3R_7_18790001 chr3R_18790001 RAL-382 3070 chr3R 18792758 18792833 chr3R 18792891 18792966 11 133 6.0 0.0 3.0 2.8 208 chr3R 18792758 intron CG7720 - chr3R 18792862 intron CG7720 - chr3R 18792966 intron CG7720 - chr3R_11_18790001 chr3R_18790001 RAL-382 3071 chr3R 18807281 18807314 chr3R 18807407 18807440 16 125 5.5 0.0 2.8 4.2 159 chr3R 18807281 exon CG18208 - chr3R 18807360 intron CG18208 - chr3R 18807440 intron CG18208 - chr3R_16_18805001 chr3R_18805001 RAL-382 3072 chr3R 18812026 18812104 chr3R 18812154 18812224 22 124 7.5 11.0 9.2 2.2 198 chr3R 18812026 intron CG18208 - chr3R 18812125 intron CG18208 - chr3R 18812224 intron CG18208 - chr3R_22_18810001 chr3R_18810001 RAL-382 3073 chr3R 18836792 18836858 chr3R 18836952 18837018 36 158 6.0 9.5 7.8 4.1 226 chr3R 18836792 intron CG18208 - chr3R 18836905 intron CG18208 - chr3R 18837018 intron CG18208 - chr3R_36_18835001 chr3R_18835001 RAL-382 3074 chr3R 18868536 18868557 chr3R 18868681 18868695 9 150 10.5 11.5 11.0 0.8 159 chr3R 18868536 intergenic not near genes chr3R 18868616 intergenic not near genes chr3R 18868695 intergenic not near genes chr3R_9_18865001 chr3R_18865001 RAL-382 3075 chr3R 18868562 18868572 chr3R 18868660 18868725 8 142 8.5 8.5 8.5 0.8 163 chr3R 18868562 intergenic not near genes chr3R 18868644 intergenic not near genes chr3R 18868725 intergenic not near genes chr3R_8_18865001 chr3R_18865001 RAL-382 3076 chr3R 18933781 18933807 chr3R 18933886 18933913 5 120 8.0 7.0 7.5 0.6 132 chr3R 18933781 intron CG42613 + chr3R 18933847 intron CG42613 + chr3R 18933913 intron CG42613 + chr3R_5_18930001 chr3R_18930001 RAL-382 3077 chr3R 19116883 19116898 chr3R 19117051 19117054 4 165 4.0 0.0 2.0 1.3 171 chr3R 19116883 intron CG6040 + chr3R 19116968 intron CG6040 + chr3R 19117054 intron CG6040 + chr3R_4_19115001 chr3R_19115001 RAL-382 3078 chr3R 19128826 19128838 chr3R 19129010 19129022 5 184 0.0 7.5 3.8 1.0 196 chr3R 19128826 intron CG6040 + chr3R 19128924 intron CG6040 + chr3R 19129022 intron CG6040 + chr3R_5_19125001 chr3R_19125001 RAL-382 3079 chr3R 19136406 19136474 chr3R 19139742 19139810 Bari1 65 3341 130.0 84.5 107.2 0.6 3404 chr3R 19136406 exon Cyp12a4 + chr3R 19138108 intergenic not near genes chr3R 19139810 3` UTR Ppcs - chr3R_65_19135001 chr3R_19135001 RAL-382 3080 chr3R 19140227 19140287 chr3R 19140725 19140785 10 493 10.0 5.0 7.5 1.2 558 chr3R 19140227 3` UTR Ppcs - chr3R 19140506 3` UTR Ppcs - chr3R 19140785 3` UTR Ppcs - chr3R_10_19140001 chr3R_19140001 RAL-382 3081 chr3R 19193003 19193006 chr3R 19197301 19197360 F-element 5 4327 0.0 8.0 4.0 1.0 4357 chr3R 19193003 intron CG31475 + chr3R 19195182 intron CG31475 + chr3R 19197360 intron CG31475 + chr3R_5_19195001 chr3R_19195001 RAL-382 3082 chr3R 19208648 19208659 chr3R 19208785 19208796 6 137 11.0 0.5 5.8 0.9 148 chr3R 19208648 intergenic not near genes chr3R 19208722 intergenic not near genes chr3R 19208796 intergenic not near genes chr3R_6_19205001 chr3R_19205001 RAL-382 3083 chr3R 19332948 19332950 chr3R 29474303 29474305 4 10141355 9.5 31.5 20.5 0.2 10141357 chr3R 19332948 intergenic not near genes chr3R 24403626 intron nAChRalpha1 - chr3R 29474305 intron Ptp99A + chr3R_4_24400001 chr3R_24400001 RAL-382 3084 chr3R 19344622 19344694 chr3R 19344802 19344879 20 184 5.5 5.5 5.5 3.1 257 chr3R 19344622 intergenic not near genes chr3R 19344750 intergenic not near genes chr3R 19344879 intergenic not near genes chr3R_20_19340001 chr3R_19340001 RAL-382 3085 chr3R 19417498 19417558 chr3R 19417634 19417706 20 138 0.5 6.0 3.2 4.8 208 chr3R 19417498 intron CG31221 + chr3R 19417602 intron CG31221 + chr3R 19417706 intron CG31221 + chr3R_20_19415001 chr3R_19415001 RAL-382 3086 chr3R 19427421 19427428 chr3R 19427548 19427555 5 127 11.5 0.0 5.8 0.7 134 chr3R 19427421 intron CG31221 + chr3R 19427488 intron CG31221 + chr3R 19427555 intron CG31221 + chr3R_5_19425001 chr3R_19425001 RAL-382 3087 chr3R 19494361 19494413 chr3R 19494491 19494543 17 130 8.5 16.5 12.5 1.3 182 chr3R 19494361 intron Dys + chr3R 19494452 intron Dys + chr3R 19494543 intron Dys + chr3R_17_19490001 chr3R_19490001 RAL-382 3088 chr3R 19561779 19561805 chr3R 19561906 19561909 5 122 22.0 2.0 12.0 0.4 130 chr3R 19561779 intron Dys + chr3R 19561844 intron Dys + chr3R 19561909 intron Dys + chr3R_5_19560001 chr3R_19560001 RAL-382 3089 chr3R 19581594 19581663 chr3R 19581724 19581793 16 129 13.0 5.0 9.0 1.6 199 chr3R 19581594 intron Dys + chr3R 19581694 intron Dys + chr3R 19581793 intron Dys + chr3R_16_19580001 chr3R_19580001 RAL-382 3090 chr3R 19587423 19587493 chr3R 19587560 19587622 20 133 7.0 5.5 6.2 2.8 199 chr3R 19587423 intron Dys + chr3R 19587522 intron Dys + chr3R 19587622 intron Dys + chr3R_20_19585001 chr3R_19585001 RAL-382 3091 chr3R 19593459 19593515 chr3R 19593594 19593650 34 133 10.5 10.0 10.2 3.0 191 chr3R 19593459 intron Dys + chr3R 19593554 intron Dys + chr3R 19593650 intron Dys + chr3R_34_19590001 chr3R_19590001 RAL-382 3092 chr3R 19602519 19602601 chr3R 19602649 19602731 29 129 6.0 11.5 8.8 3.0 212 chr3R 19602519 exon CG7333 + chr3R 19602625 3` UTR CG7333 + chr3R 19602731 intergenic CG7333 + chr3R_29_19600001 chr3R_19600001 RAL-382 3093 chr3R 19633265 19633320 chr3R 19633401 19633456 23 135 5.5 17.0 11.2 1.9 191 chr3R 19633265 intergenic subdued - chr3R 19633360 intergenic subdued - chr3R 19633456 3` UTR subdued - chr3R_23_19630001 chr3R_19630001 RAL-382 3094 chr3R 19744201 19744208 chr3R 19749495 19749502 Rt1a 5 5294 16.5 12.5 14.5 0.3 5301 chr3R 19744201 intron,intron GluClalpha +,CR43488 - chr3R 19746852 intron GluClalpha + chr3R 19749502 intron GluClalpha + chr3R_5_19745001 chr3R_19745001 RAL-382 3095 chr3R 19763874 19763954 chr3R 19764012 19764092 11 138 2.0 0.0 1.0 5.5 218 chr3R 19763874 intron GluClalpha + chr3R 19763983 intron GluClalpha + chr3R 19764092 intron GluClalpha + chr3R_11_19760001 chr3R_19760001 RAL-382 3096 chr3R 19777255 19777314 chr3R 19777471 19777530 17 214 12.0 6.0 9.0 1.7 275 chr3R 19777255 5` UTR CG11659 - chr3R 19777392 intergenic CG11659 - chr3R 19777530 intergenic CG11659 - chr3R_17_19775001 chr3R_19775001 RAL-382 3097 chr3R 19830834 19830881 chr3R 19830961 19831008 9 127 0.0 4.5 2.2 2.8 174 chr3R 19830834 intron bnl - chr3R 19830921 intron bnl - chr3R 19831008 intron bnl - chr3R_9_19830001 chr3R_19830001 RAL-382 3098 chr3R 19846910 19846994 chr3R 19847120 19847205 22 209 4.5 4.0 4.2 4.2 295 chr3R 19846910 intergenic CG4662 + chr3R 19847058 intergenic CG4662 + chr3R 19847205 intergenic CG4662 + chr3R_22_19845001 chr3R_19845001 RAL-382 3099 chr3R 19890184 19890251 chr3R 19890378 19890445 18 194 7.5 6.0 6.8 2.3 261 chr3R 19890184 intergenic not near genes chr3R 19890314 intergenic CG4733 + chr3R 19890445 intergenic CG4733 + chr3R_18_19890001 chr3R_19890001 RAL-382 3100 chr3R 19908218 19908301 chr3R 19908352 19908415 27 133 0.0 3.5 1.8 9.6 197 chr3R 19908218 intron RhoGAP92B + chr3R 19908316 intron RhoGAP92B + chr3R 19908415 intron,3` UTR RhoGAP92B +,CR45048 - chr3R_27_19905001 chr3R_19905001 RAL-382 3101 chr3R 19913968 19914038 chr3R 19914111 19914181 45 141 12.0 13.0 12.5 3.3 213 chr3R 19913968 3` UTR RhoGAP92B + chr3R 19914074 3` UTR RhoGAP92B + chr3R 19914181 3` UTR RhoGAP92B + chr3R_45_19910001 chr3R_19910001 RAL-382 3102 chr3R 19920505 19920572 chr3R 19921881 19921948 22 1374 7.5 8.0 7.8 2.5 1443 chr3R 19920505 exon CG4770 + chr3R 19921226 3` UTR CR43282 - chr3R 19921948 exon CG4462 - chr3R_22_19920001 chr3R_19920001 RAL-382 3103 chr3R 19963591 19963836 chr3R 19963727 19964005 42 148 7.5 9.0 8.2 4.6 414 chr3R 19963591 intron Hs6st - chr3R 19963798 intron Hs6st - chr3R 19964005 intron Hs6st - chr3R_42_19960001 chr3R_19960001 RAL-382 3104 chr3R 19970620 19970692 chr3R 19971023 19971095 26 404 8.5 7.0 7.8 3.0 475 chr3R 19970620 intron Hs6st - chr3R 19970858 intron Hs6st - chr3R 19971095 intron Hs6st - chr3R_26_19970001 chr3R_19970001 RAL-382 3105 chr3R 19981476 19981545 chr3R 19981616 19981681 12 137 1.5 0.0 0.8 6.7 205 chr3R 19981476 intron Hs6st - chr3R 19981578 intron Hs6st - chr3R 19981681 intron Hs6st - chr3R_12_19980001 chr3R_19980001 RAL-382 3106 chr3R 20008781 20008841 chr3R 20008912 20008972 29 130 13.0 10.5 11.8 2.3 191 chr3R 20008781 intergenic MED25 +,Hs6st - chr3R 20008876 intergenic MED25 +,Hs6st - chr3R 20008972 5` UTR MED25 + chr3R_29_20005001 chr3R_20005001 RAL-382 3107 chr3R 20020105 20020180 chr3R 20020297 20020372 24 192 6.5 7.5 7.0 3.0 267 chr3R 20020105 intron CG4433 - chr3R 20020238 intron CG4433 - chr3R 20020372 exon CG4433 - chr3R_24_20020001 chr3R_20020001 RAL-382 3108 chr3R 20066068 20066130 chr3R 20066308 20066364 17 239 8.0 0.0 4.0 3.4 296 chr3R 20066068 intergenic not near genes chr3R 20066216 intergenic not near genes chr3R 20066364 intergenic not near genes chr3R_17_20065001 chr3R_20065001 RAL-382 3109 chr3R 20066506 20066582 chr3R 20066792 20066868 26 285 7.5 9.0 8.2 2.8 362 chr3R 20066506 intergenic not near genes chr3R 20066687 intergenic not near genes chr3R 20066868 intergenic not near genes chr3R_26_20065001 chr3R_20065001 RAL-382 3110 chr3R 20109491 20109563 chr3R 20114745 20114809 copia 20 5252 5.5 9.5 7.5 2.4 5318 chr3R 20109491 intergenic not near genes chr3R 20112150 intergenic not near genes chr3R 20114809 intergenic CG10887 + chr3R_20_20110001 chr3R_20110001 RAL-382 3111 chr3R 20132929 20132986 chr3R 20133055 20133112 8 126 7.5 5.0 6.2 1.1 183 chr3R 20132929 intergenic not near genes chr3R 20133020 intergenic not near genes chr3R 20133112 intergenic not near genes chr3R_8_20130001 chr3R_20130001 RAL-382 3112 chr3R 20156653 20156714 chr3R 20165873 20165933 roo 32 9219 9.0 11.5 10.2 2.9 9280 chr3R 20156653 intergenic not near genes chr3R 20161293 intergenic not near genes chr3R 20165933 intergenic not near genes chr3R_32_20160001 chr3R_20160001 RAL-382 3113 chr3R 20203910 20203925 chr3R 20204041 20204056 14 131 4.0 11.0 7.5 1.6 146 chr3R 20203910 intergenic not near genes chr3R 20203983 intergenic not near genes chr3R 20204056 intergenic not near genes chr3R_14_20200001 chr3R_20200001 RAL-382 3114 chr3R 20205519 20205593 chr3R 20205691 20205765 39 172 6.5 7.0 6.8 5.0 246 chr3R 20205519 intron Nlg4 + chr3R 20205642 intron Nlg4 + chr3R 20205765 intron Nlg4 + chr3R_39_20205001 chr3R_20205001 RAL-382 3115 chr3R 20205884 20205929 chr3R 20206018 20206063 8 133 2.5 8.0 5.2 1.3 179 chr3R 20205884 intron Nlg4 + chr3R 20205974 intron Nlg4 + chr3R 20206063 intron Nlg4 + chr3R_8_20205001 chr3R_20205001 RAL-382 3116 chr3R 20209759 20209824 chr3R 20209895 20209960 31 136 10.5 5.5 8.0 3.4 201 chr3R 20209759 intron,5` UTR Nlg4 +,CG17199 - chr3R 20209860 intron Nlg4 + chr3R 20209960 intron Nlg4 + chr3R_31_20205001 chr3R_20205001 RAL-382 3117 chr3R 20222507 20222573 chr3R 20222773 20222822 35 264 9.5 12.0 10.8 3.0 315 chr3R 20222507 intron Nlg4 + chr3R 20222664 intron Nlg4 + chr3R 20222822 intron Nlg4 + chr3R_35_20220001 chr3R_20220001 RAL-382 3118 chr3R 20231463 20231519 chr3R 20231592 20231648 25 129 67.0 44.5 55.8 0.4 185 chr3R 20231463 intron Nlg4 + chr3R 20231556 intron Nlg4 + chr3R 20231648 intron Nlg4 + chr3R_25_20230001 chr3R_20230001 RAL-382 3119 chr3R 20238755 20238768 chr3R 20238885 20238898 11 128 23.5 13.0 18.2 0.6 143 chr3R 20238755 intron Nlg4 + chr3R 20238826 intron Nlg4 + chr3R 20238898 intron Nlg4 + chr3R_11_20235001 chr3R_20235001 RAL-382 3120 chr3R 20245236 20245295 chr3R 20248896 20248955 F-element 28 3659 13.5 0.0 6.8 3.6 3719 chr3R 20245236 3` UTR Nlg4 + chr3R 20247096 intergenic not near genes chr3R 20248955 intergenic not near genes chr3R_28_20245001 chr3R_20245001 RAL-382 3121 chr3R 20256789 20256857 chr3R 20256915 20256985 22 126 1.0 8.5 4.8 3.8 196 chr3R 20256789 intron cic + chr3R 20256887 intron cic + chr3R 20256985 intron cic + chr3R_22_20255001 chr3R_20255001 RAL-382 3122 chr3R 20266468 20266537 chr3R 20272989 20273058 Burdock 14 6521 9.5 11.5 10.5 1.2 6590 chr3R 20266468 intron cic + chr3R 20269763 intron cic + chr3R 20273058 intron cic + chr3R_14_20265001 chr3R_20265001 RAL-382 3123 chr3R 20282225 20282297 chr3R 20282351 20282423 30 126 1.0 7.0 4.0 6.0 198 chr3R 20282225 intron cic + chr3R 20282324 intron cic + chr3R 20282423 intron cic + chr3R_30_20280001 chr3R_20280001 RAL-382 3124 chr3R 20330959 20331023 chr3R 20331495 20331559 roo 28 536 8.5 11.0 9.8 2.6 600 chr3R 20330959 intergenic Sirt2 + chr3R 20331259 intergenic Sirt2 + chr3R 20331559 intergenic not near genes chr3R_28_20330001 chr3R_20330001 RAL-382 3125 chr3R 20434792 20434865 chr3R 20435027 20435100 27 235 6.5 4.0 5.2 4.4 308 chr3R 20434792 intron Gfrl - chr3R 20434946 intron Gfrl - chr3R 20435100 intron Gfrl - chr3R_27_20430001 chr3R_20430001 RAL-382 3126 chr3R 20456065 20456074 chr3R 20456219 20456228 5 154 18.0 9.5 13.8 0.3 163 chr3R 20456065 intron Gfrl - chr3R 20456146 intron Gfrl - chr3R 20456228 intron Gfrl - chr3R_5_20455001 chr3R_20455001 RAL-382 3127 chr3R 20456077 20456127 chr3R 20456207 20456264 17 144 8.0 7.0 7.5 2.0 187 chr3R 20456077 intron Gfrl - chr3R 20456170 intron Gfrl - chr3R 20456264 intron Gfrl - chr3R_17_20455001 chr3R_20455001 RAL-382 3128 chr3R 20457970 20458043 chr3R 20458109 20458187 23 141 7.0 3.5 5.2 3.7 217 chr3R 20457970 intron Gfrl - chr3R 20458078 intron Gfrl - chr3R 20458187 intron Gfrl - chr3R_23_20455001 chr3R_20455001 RAL-382 3129 chr3R 20467044 20467053 chr3R 20467168 20467179 4 124 14.0 3.5 8.8 0.4 135 chr3R 20467044 intron Gfrl - chr3R 20467112 intron Gfrl - chr3R 20467179 intron Gfrl - chr3R_4_20465001 chr3R_20465001 RAL-382 3130 chr3R 20467057 20467079 chr3R 20467157 20467188 11 112 8.5 5.0 6.8 1.4 131 chr3R 20467057 intron Gfrl - chr3R 20467122 intron Gfrl - chr3R 20467188 intron Gfrl - chr3R_11_20465001 chr3R_20465001 RAL-382 3131 chr3R 20467088 20467108 chr3R 20467153 20467192 4 80 5.0 3.5 4.2 0.8 104 chr3R 20467088 intron Gfrl - chr3R 20467140 intron Gfrl - chr3R 20467192 intron Gfrl - chr3R_4_20465001 chr3R_20465001 RAL-382 3132 chr3R 20469232 20469460 chr3R 20469379 20469597 29 143 1.5 1.5 1.5 11.6 365 chr3R 20469232 intron Gfrl - chr3R 20469414 intron Gfrl - chr3R 20469597 intron Gfrl - chr3R_29_20465001 chr3R_20465001 RAL-382 3133 chr3R 20483279 20483288 chr3R 20483414 20483422 5 135 9.5 7.5 8.5 0.5 143 chr3R 20483279 intron Gfrl - chr3R 20483350 intron Gfrl - chr3R 20483422 intron Gfrl - chr3R_5_20480001 chr3R_20480001 RAL-382 3134 chr3R 20488967 20489042 chr3R 20489093 20489168 24 126 8.5 6.5 7.5 2.8 201 chr3R 20488967 intergenic not near genes chr3R 20489068 intergenic not near genes chr3R 20489168 intergenic not near genes chr3R_24_20485001 chr3R_20485001 RAL-382 3135 chr3R 20506523 20506606 chr3R 20507387 20507459 BS 27 855 0.0 8.0 4.0 5.4 936 chr3R 20506523 intergenic Or92a + chr3R 20506991 intergenic CG4288 - chr3R 20507459 3` UTR CG4288 - chr3R_27_20505001 chr3R_20505001 RAL-382 3136 chr3R 20508291 20508335 chr3R 20508422 20508466 17 131 19.0 0.0 9.5 1.6 175 chr3R 20508291 intron CG4288 - chr3R 20508378 intron CG4288 - chr3R 20508466 intron CG4288 - chr3R_17_20505001 chr3R_20505001 RAL-382 3137 chr3R 20511894 20511965 chr3R 20512040 20512111 26 146 5.5 9.5 7.5 3.1 217 chr3R 20511894 intron CG4288 - chr3R 20512002 intron CG4288 - chr3R 20512111 intron CG4288 - chr3R_26_20510001 chr3R_20510001 RAL-382 3138 chr3R 20512305 20512369 chr3R 20512438 20512494 17 128 6.5 6.0 6.2 2.4 189 chr3R 20512305 intron CG4288 - chr3R 20512400 5` UTR CG4288 - chr3R 20512494 intergenic CG4288 - chr3R_17_20510001 chr3R_20510001 RAL-382 3139 chr3R 20512952 20513021 chr3R 20515705 20515774 opus 21 2753 8.0 0.0 4.0 4.2 2822 chr3R 20512952 intergenic CG4288 - chr3R 20514363 intergenic not near genes chr3R 20515774 intergenic not near genes chr3R_21_20510001 chr3R_20510001 RAL-382 3140 chr3R 20545942 20545981 chr3R 20546072 20546116 14 132 11.0 13.5 12.2 1.1 174 chr3R 20545942 intron Stat92E - chr3R 20546029 intron Stat92E - chr3R 20546116 intron Stat92E - chr3R_14_20545001 chr3R_20545001 RAL-382 3141 chr3R 20545982 20546001 chr3R 20546061 20546136 9 129 7.5 11.5 9.5 0.9 154 chr3R 20545982 intron Stat92E - chr3R 20546059 intron Stat92E - chr3R 20546136 intron Stat92E - chr3R_9_20545001 chr3R_20545001 RAL-382 3142 chr3R 20553446 20553480 chr3R 20553585 20553619 6 138 0.0 8.0 4.0 1.2 173 chr3R 20553446 intron,intron att-ORFA -,att-ORFB - chr3R 20553532 intron,intron att-ORFA -,att-ORFB - chr3R 20553619 exon,exon att-ORFA -,att-ORFB - chr3R_6_20550001 chr3R_20550001 RAL-382 3143 chr3R 20575777 20575782 chr3R 20575903 20575908 4 126 19.0 0.0 9.5 0.4 131 chr3R 20575777 intron TFAM - chr3R 20575842 intron TFAM - chr3R 20575908 intron TFAM - chr3R_4_20575001 chr3R_20575001 RAL-382 3144 chr3R 20594436 20594513 chr3R 20594576 20594658 25 141 7.0 0.0 3.5 5.6 222 chr3R 20594436 intron bon + chr3R 20594547 intron bon + chr3R 20594658 intron bon + chr3R_25_20590001 chr3R_20590001 RAL-382 3145 chr3R 20605799 20605863 chr3R 20605936 20605999 26 137 10.5 13.5 12.0 2.0 200 chr3R 20605799 intron bon + chr3R 20605899 intron bon + chr3R 20605999 intron bon + chr3R_26_20605001 chr3R_20605001 RAL-382 3146 chr3R 20663668 20663707 chr3R 20663819 20663860 15 151 15.0 10.5 12.8 1.1 192 chr3R 20663668 intergenic not near genes chr3R 20663764 intergenic not near genes chr3R 20663860 intergenic not near genes chr3R_15_20660001 chr3R_20660001 RAL-382 3147 chr3R 20663713 20663737 chr3R 20663809 20663873 13 135 8.0 9.0 8.5 1.4 160 chr3R 20663713 intergenic not near genes chr3R 20663793 intergenic not near genes chr3R 20663873 intergenic not near genes chr3R_13_20660001 chr3R_20660001 RAL-382 3148 chr3R 20717046 20717111 chr3R 20717179 20717228 13 122 7.5 6.5 7.0 1.6 182 chr3R 20717046 intergenic not near genes chr3R 20717137 intergenic not near genes chr3R 20717228 intergenic not near genes chr3R_13_20715001 chr3R_20715001 RAL-382 3149 chr3R 20730886 20731043 chr3R 20731036 20731181 21 144 0.0 0.0 0.0 21.0 295 chr3R 20730886 intergenic not near genes chr3R 20731034 intergenic not near genes chr3R 20731181 intergenic CG31205 + chr3R_21_20730001 chr3R_20730001 RAL-382 3150 chr3R 20733718 20734014 chr3R 20733860 20734144 37 138 0.0 5.5 2.8 9.7 426 chr3R 20733718 intergenic not near genes chr3R 20733931 intergenic not near genes chr3R 20734144 intergenic not near genes chr3R_37_20730001 chr3R_20730001 RAL-382 3151 chr3R 20745628 20745703 chr3R 20745811 20745886 44 182 8.5 8.0 8.2 4.8 258 chr3R 20745628 intron CG42322 + chr3R 20745757 intron CG42322 + chr3R 20745886 intron CG42322 + chr3R_44_20745001 chr3R_20745001 RAL-382 3152 chr3R 20771901 20771971 chr3R 20772039 20772109 35 137 8.5 7.0 7.8 4.0 208 chr3R 20771901 intron,exon Syp +,Takl1 - chr3R 20772005 intron,exon Syp +,Takl1 - chr3R 20772109 intron,intron Syp +,Takl1 - chr3R_35_20770001 chr3R_20770001 RAL-382 3153 chr3R 20787390 20787458 chr3R 20787531 20787599 36 138 10.5 10.0 10.2 3.2 209 chr3R 20787390 intron Syp + chr3R 20787494 intron Syp + chr3R 20787599 intron Syp + chr3R_36_20785001 chr3R_20785001 RAL-382 3154 chr3R 20847724 20847797 chr3R 20848011 20848084 47 287 11.5 9.0 10.2 4.2 360 chr3R 20847724 3` UTR CG15696 + chr3R 20847904 intergenic CG15696 + chr3R 20848084 intergenic CG15696 + chr3R_47_20845001 chr3R_20845001 RAL-382 3155 chr3R 20850046 20850112 chr3R 20850181 20850247 31 134 0.0 11.0 5.5 4.8 201 chr3R 20850046 intergenic RpS30 + chr3R 20850146 intergenic RpS30 + chr3R 20850247 intergenic RpS30 + chr3R_31_20850001 chr3R_20850001 RAL-382 3156 chr3R 20854433 20854489 chr3R 20859274 20859328 Doc 16 4838 1.0 11.5 6.2 2.2 4895 chr3R 20854433 intron Ir93a - chr3R 20856880 intron Ir93a - chr3R 20859328 exon Ir93a - chr3R_16_20855001 chr3R_20855001 RAL-382 3157 chr3R 20854494 20854508 chr3R 20859269 20859341 Doc 9 4823 1.0 10.0 5.5 1.4 4847 chr3R 20854494 intron Ir93a - chr3R 20856918 intron Ir93a - chr3R 20859341 exon Ir93a - chr3R_9_20855001 chr3R_20855001 RAL-382 3158 chr3R 20899878 20899932 chr3R 20900024 20900078 26 146 4.5 14.5 9.5 2.5 200 chr3R 20899878 intergenic not near genes chr3R 20899978 intergenic not near genes chr3R 20900078 intergenic not near genes chr3R_26_20895001 chr3R_20895001 RAL-382 3159 chr3R 20936038 20936103 chr3R 20936165 20936230 24 127 5.0 7.5 6.2 3.3 192 chr3R 20936038 intron CG31191 - chr3R 20936134 intron CG31191 - chr3R 20936230 intron CG31191 - chr3R_24_20935001 chr3R_20935001 RAL-382 3160 chr3R 20966078 20966156 chr3R 20966211 20966289 22 132 3.0 6.5 4.8 3.8 211 chr3R 20966078 intron Atpalpha + chr3R 20966184 intron Atpalpha + chr3R 20966289 intron Atpalpha + chr3R_22_20965001 chr3R_20965001 RAL-382 3161 chr3R 21020354 21020428 chr3R 21020480 21020554 40 126 7.5 11.5 9.5 3.8 200 chr3R 21020354 3` UTR Rlip + chr3R 21020454 3` UTR Rlip + chr3R 21020554 3` UTR Rlip + chr3R_40_21020001 chr3R_21020001 RAL-382 3162 chr3R 21041055 21041118 chr3R 21041258 21041321 23 202 9.0 7.5 8.2 2.5 266 chr3R 21041055 exon Dhc93AB - chr3R 21041188 intron Dhc93AB - chr3R 21041321 intron Dhc93AB - chr3R_23_21040001 chr3R_21040001 RAL-382 3163 chr3R 21059435 21059479 chr3R 21063235 21063300 22 3800 42.0 42.5 42.2 0.5 3865 chr3R 21059435 intron Mvl - chr3R 21061368 intergenic Cortactin - chr3R 21063300 exon Cortactin - chr3R_22_21060001 chr3R_21060001 RAL-382 3164 chr3R 21107989 21108063 chr3R 21108300 21108374 16 311 5.0 5.0 5.0 2.7 385 chr3R 21107989 intergenic Sec15 -,rtet + chr3R 21108182 intergenic Sec15 -,rtet + chr3R 21108374 intergenic rtet +,Sec15 - chr3R_16_21105001 chr3R_21105001 RAL-382 3165 chr3R 21132581 21132636 chr3R 21132714 21132759 12 132 9.5 0.0 4.8 2.1 178 chr3R 21132581 3` UTR Ice2 + chr3R 21132670 3` UTR Ice2 + chr3R 21132759 exon CG7009 - chr3R_12_21130001 chr3R_21130001 RAL-382 3166 chr3R 21141668 21141703 chr3R 21150161 21150211 Tirant 6 8513 8.5 7.5 8.0 0.7 8543 chr3R 21141668 intron SNF4Agamma + chr3R 21145940 intron SNF4Agamma + chr3R 21150211 intron SNF4Agamma + chr3R_6_21145001 chr3R_21145001 RAL-382 3167 chr3R 21154524 21154586 chr3R 21154789 21154851 30 265 5.5 5.5 5.5 4.6 327 chr3R 21154524 intron SNF4Agamma + chr3R 21154688 intron SNF4Agamma + chr3R 21154851 intron SNF4Agamma + chr3R_30_21150001 chr3R_21150001 RAL-382 3168 chr3R 21177265 21177276 chr3R 21177399 21177410 6 134 11.5 0.0 5.8 0.9 145 chr3R 21177265 intron SNF4Agamma + chr3R 21177338 intron SNF4Agamma + chr3R 21177410 intron SNF4Agamma + chr3R_6_21175001 chr3R_21175001 RAL-382 3169 chr3R 21214626 21214658 chr3R 21214911 21214943 22 285 7.5 7.0 7.2 2.7 317 chr3R 21214626 intergenic CG5862 + chr3R 21214784 intergenic CG5862 + chr3R 21214943 intergenic CG5862 + chr3R_22_21210001 chr3R_21210001 RAL-382 3170 chr3R 21245802 21245866 chr3R 21245936 21246000 35 134 11.0 6.0 8.5 3.7 198 chr3R 21245802 intergenic CG5892 + chr3R 21245901 intergenic CG5892 + chr3R 21246000 intergenic not near genes chr3R_35_21245001 chr3R_21245001 RAL-382 3171 chr3R 21322925 21323005 chr3R 21323054 21323137 22 126 4.0 7.0 5.5 3.4 212 chr3R 21322925 exon CG16791 - chr3R 21323031 intron CG16791 - chr3R 21323137 intron CG16791 - chr3R_22_21320001 chr3R_21320001 RAL-382 3172 chr3R 21379434 21379499 chr3R 21379635 21379703 12 201 0.0 10.5 5.2 1.9 269 chr3R 21379434 intron tin + chr3R 21379568 intron tin + chr3R 21379703 intron tin + chr3R_12_21375001 chr3R_21375001 RAL-382 3173 chr3R 21385890 21385928 chr3R 21386017 21386055 13 125 17.0 3.5 10.2 1.2 165 chr3R 21385890 intergenic not near genes chr3R 21385972 intergenic not near genes chr3R 21386055 intergenic not near genes chr3R_13_21385001 chr3R_21385001 RAL-382 3174 chr3R 21385936 21385961 chr3R 21386013 21386088 11 122 10.0 3.5 6.8 1.4 152 chr3R 21385936 intergenic not near genes chr3R 21386012 intergenic not near genes chr3R 21386088 intergenic not near genes chr3R_11_21385001 chr3R_21385001 RAL-382 3175 chr3R 21415632 21415643 chr3R 21415761 21415773 5 129 14.5 7.0 10.8 0.4 141 chr3R 21415632 intron lbl - chr3R 21415702 intron lbl - chr3R 21415773 intron lbl - chr3R_5_21415001 chr3R_21415001 RAL-382 3176 chr3R 21422478 21422553 chr3R 21422606 21422668 22 124 7.5 8.0 7.8 2.5 190 chr3R 21422478 intron lbl - chr3R 21422573 intron lbl - chr3R 21422668 intron lbl - chr3R_22_21420001 chr3R_21420001 RAL-382 3177 chr3R 21460990 21461008 chr3R 21461130 21461148 6 140 10.0 0.0 5.0 1.0 158 chr3R 21460990 intergenic not near genes chr3R 21461069 intergenic not near genes chr3R 21461148 intergenic not near genes chr3R_6_21460001 chr3R_21460001 RAL-382 3178 chr3R 21464352 21464427 chr3R 21464488 21464563 40 136 9.5 4.0 6.8 5.1 211 chr3R 21464352 intergenic not near genes chr3R 21464458 intergenic not near genes chr3R 21464563 intergenic not near genes chr3R_40_21460001 chr3R_21460001 RAL-382 3179 chr3R 21471970 21472025 chr3R 21472101 21472141 16 125 5.5 11.5 8.5 1.7 171 chr3R 21471970 intergenic not near genes chr3R 21472056 intergenic not near genes chr3R 21472141 intergenic not near genes chr3R_16_21470001 chr3R_21470001 RAL-382 3180 chr3R 21518209 21518270 chr3R 21518339 21518404 14 132 0.0 7.0 3.5 3.1 195 chr3R 21518209 intergenic not near genes chr3R 21518306 intergenic not near genes chr3R 21518404 intergenic not near genes chr3R_14_21515001 chr3R_21515001 RAL-382 3181 chr3R 21520086 21520128 chr3R 21520230 21520271 26 143 14.0 11.0 12.5 1.9 185 chr3R 21520086 intergenic not near genes chr3R 21520178 intergenic not near genes chr3R 21520271 intergenic not near genes chr3R_26_21520001 chr3R_21520001 RAL-382 3182 chr3R 21594595 21594669 chr3R 21597313 21597345 15 2705 4.5 7.0 5.8 2.2 2750 chr3R 21594595 intron,5` UTR InR -,CR43653 + chr3R 21595970 intron InR - chr3R 21597345 intron InR - chr3R_15_21595001 chr3R_21595001 RAL-382 3183 chr3R 21725668 21725679 chr3R 21725854 21725865 9 186 0.0 25.0 12.5 0.7 197 chr3R 21725668 intergenic not near genes chr3R 21725766 intergenic not near genes chr3R 21725865 intergenic not near genes chr3R_9_21725001 chr3R_21725001 RAL-382 3184 chr3R 21734814 21734836 chr3R 21734940 21734962 7 125 13.5 0.0 6.8 0.9 148 chr3R 21734814 intergenic not near genes chr3R 21734888 intergenic not near genes chr3R 21734962 intergenic not near genes chr3R_7_21730001 chr3R_21730001 RAL-382 3185 chr3R 21751139 21751172 chr3R 21753885 21753959 22 2750 33.5 63.0 48.2 0.4 2820 chr3R 21751139 exon CG31233 + chr3R 21752549 exon CG31233 + chr3R 21753959 intergenic CG31198 + chr3R_22_21750001 chr3R_21750001 RAL-382 3186 chr3R 21761116 21761150 chr3R 21768524 21768551 mdg1 10 7431 7.5 6.0 6.8 1.3 7435 chr3R 21761116 exon CG42335 + chr3R 21764834 intron CG42335 + chr3R 21768551 exon CG42335 + chr3R_10_21760001 chr3R_21760001 RAL-382 3187 chr3R 21784813 21784847 chr3R 21784942 21784976 12 129 12.5 6.0 9.2 1.2 163 chr3R 21784813 3` UTR,3` UTR CASK -,CRG - chr3R 21784894 3` UTR,3` UTR CASK -,CRG - chr3R 21784976 3` UTR,3` UTR CASK -,CRG - chr3R_12_21780001 chr3R_21780001 RAL-382 3188 chr3R 21784848 21784855 chr3R 21784938 21784983 6 122 11.0 5.0 8.0 0.7 135 chr3R 21784848 3` UTR,3` UTR CASK -,CRG - chr3R 21784916 3` UTR,3` UTR CASK -,CRG - chr3R 21784983 3` UTR,3` UTR CASK -,CRG - chr3R_6_21780001 chr3R_21780001 RAL-382 3189 chr3R 8339246 8339246 chr3R 21907534 21907534 4 13568288 38.0 34.5 36.2 0.1 13568288 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907534 intergenic CG6678 + chr3R_4_15120001 chr3R_15120001 RAL-382 3190 chr3R 21907534 21907534 chr3R 24389465 24389465 4 2481931 32.5 42.5 37.5 0.1 2481931 chr3R 21907534 intergenic CG6678 + chr3R 23148500 intergenic not near genes chr3R 24389465 intron CG5768 - chr3R_4_23145001 chr3R_23145001 RAL-382 3191 chr3R 21907534 21907534 chr3R 26659333 26659337 8 4751801 32.5 6.5 19.5 0.4 4751803 chr3R 21907534 intergenic CG6678 + chr3R 24283436 intergenic CR45662 - chr3R 26659337 intron beat-VII - chr3R_8_24280001 chr3R_24280001 RAL-382 3192 chr3R 21907534 21907534 chr3R 28831801 28831802 22 6924268 32.5 26.5 29.5 0.7 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_22_25365001 chr3R_25365001 RAL-382 3193 chr3R 8339246 8339247 chr3R 21907535 21907535 8 13568288 39.0 34.5 36.8 0.2 13568289 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907535 intergenic CG6678 + chr3R_8_15120001 chr3R_15120001 RAL-382 3194 chr3R 21907535 21907535 chr3R 26659334 26659337 6 4751800 33.0 6.5 19.8 0.3 4751802 chr3R 21907535 intergenic CG6678 + chr3R 24283436 intergenic CR45662 - chr3R 26659337 intron beat-VII - chr3R_6_24280001 chr3R_24280001 RAL-382 3195 chr3R 21907535 21907535 chr3R 28831801 28831803 62 6924266 33.0 26.5 29.8 2.0 6924268 chr3R 21907535 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831803 intron WASp - chr3R_62_25365001 chr3R_25365001 RAL-382 3196 chr3R 9620956 9621017 chr3R 21907536 21907536 4 12286565 21.0 34.5 27.8 0.1 12286580 chr3R 9620956 intron CG8312 + chr3R 15764246 intergenic not near genes chr3R 21907536 intergenic CG6678 + chr3R_4_15760001 chr3R_15760001 RAL-382 3197 chr3R 21907536 21907536 chr3R 28831801 28831802 56 6924266 33.5 26.5 30.0 1.8 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_56_25365001 chr3R_25365001 RAL-382 3198 chr3R 21923980 21924025 chr3R 21924120 21924159 20 138 8.0 0.5 4.2 3.8 179 chr3R 21923980 intergenic not near genes chr3R 21924070 intergenic not near genes chr3R 21924159 intergenic not near genes chr3R_20_21920001 chr3R_21920001 RAL-382 3199 chr3R 21924026 21924049 chr3R 21924119 21924154 11 121 4.0 0.5 2.2 3.4 128 chr3R 21924026 intergenic not near genes chr3R 21924090 intergenic not near genes chr3R 21924154 intergenic not near genes chr3R_11_21920001 chr3R_21920001 RAL-382 3200 chr3R 21939646 21939718 chr3R 21939804 21939836 39 157 10.0 0.5 5.2 6.3 190 chr3R 21939646 intergenic not near genes chr3R 21939741 intergenic not near genes chr3R 21939836 intergenic not near genes chr3R_39_21935001 chr3R_21935001 RAL-382 3201 chr3R 21985181 21985262 chr3R 21985336 21985414 21 154 8.5 5.5 7.0 2.6 233 chr3R 21985181 intron Eip93F + chr3R 21985298 intron Eip93F + chr3R 21985414 intron Eip93F + chr3R_21_21985001 chr3R_21985001 RAL-382 3202 chr3R 22013042 22013064 chr3R 22013174 22013196 12 131 12.5 20.0 16.2 0.7 154 chr3R 22013042 intergenic not near genes chr3R 22013119 intergenic not near genes chr3R 22013196 intergenic not near genes chr3R_12_22010001 chr3R_22010001 RAL-382 3203 chr3R 22044799 22044872 chr3R 22044926 22044949 26 122 10.0 11.0 10.5 2.3 150 chr3R 22044799 intron how + chr3R 22044874 intron how + chr3R 22044949 intron how + chr3R_26_22040001 chr3R_22040001 RAL-382 3204 chr3R 8287386 8287387 chr3R 22081601 22081601 5 13794214 32.5 10.5 21.5 0.2 13794215 chr3R 8287386 intron CR44318 + chr3R 15184494 intron Gyc88E + chr3R 22081601 intron CG13408 + chr3R_5_15180001 chr3R_15180001 RAL-382 3205 chr3R 22084566 22084626 chr3R 22084705 22084765 26 136 0.0 11.5 5.8 3.8 199 chr3R 22084566 intergenic not near genes chr3R 22084666 intergenic not near genes chr3R 22084765 intergenic not near genes chr3R_26_22080001 chr3R_22080001 RAL-382 3206 chr3R 22234644 22234711 chr3R 22236012 22236080 pogo 26 1368 6.5 10.0 8.2 2.8 1436 chr3R 22234644 intron SKIP + chr3R 22235362 intron SKIP + chr3R 22236080 intron SKIP + chr3R_26_22235001 chr3R_22235001 RAL-382 3207 chr3R 22239485 22239525 chr3R 22248583 22248623 roo 16 9096 7.5 0.5 4.0 3.2 9138 chr3R 22239485 intron SKIP + chr3R 22244054 intron SKIP + chr3R 22248623 intron SKIP + chr3R_16_22240001 chr3R_22240001 RAL-382 3208 chr3R 22260262 22260312 chr3R 22260434 22260484 15 172 6.5 5.5 6.0 2.1 222 chr3R 22260262 intron SKIP + chr3R 22260373 intron SKIP + chr3R 22260484 intron SKIP + chr3R_15_22260001 chr3R_22260001 RAL-382 3209 chr3R 22309956 22309977 chr3R 22310089 22310110 10 133 24.0 7.0 15.5 0.6 154 chr3R 22309956 3` UTR CG34377 - chr3R 22310033 3` UTR CG34377 - chr3R 22310110 3` UTR CG34377 - chr3R_10_22310001 chr3R_22310001 RAL-382 3210 chr3R 22428540 22428603 chr3R 22428666 22428729 22 124 9.5 12.0 10.8 1.9 189 chr3R 22428540 intron CG13847 - chr3R 22428634 intron CG13847 - chr3R 22428729 intron CG13847 - chr3R_22_22425001 chr3R_22425001 RAL-382 3211 chr3R 22433054 22433087 chr3R 22433202 22433237 17 148 15.5 14.5 15.0 1.1 183 chr3R 22433054 intron CG13847 - chr3R 22433146 intron CG13847 - chr3R 22433237 intron CG13847 - chr3R_17_22430001 chr3R_22430001 RAL-382 3212 chr3R 22450509 22450533 chr3R 22453199 22453223 NOF 11 2687 19.0 6.5 12.8 0.8 2714 chr3R 22450509 intron CG34376 + chr3R 22451866 intron CG34376 + chr3R 22453223 intron CG34376 + chr3R_11_22450001 chr3R_22450001 RAL-382 3213 chr3R 22450534 22450567 chr3R 22453198 22453257 NOF 28 2684 12.0 6.5 9.2 2.7 2723 chr3R 22450534 intron CG34376 + chr3R 22451896 intron CG34376 + chr3R 22453257 intron CG34376 + chr3R_28_22450001 chr3R_22450001 RAL-382 3214 chr3R 22538398 22538470 chr3R 22538533 22538605 24 132 9.0 11.0 10.0 2.2 207 chr3R 22538398 intron CG5326 - chr3R 22538502 intron CG5326 - chr3R 22538605 intron CG5326 - chr3R_24_22535001 chr3R_22535001 RAL-382 3215 chr3R 22556637 22556673 chr3R 22556763 22556799 14 126 10.0 1.5 5.8 2.1 162 chr3R 22556637 intergenic bond + chr3R 22556718 intergenic bond + chr3R 22556799 intergenic bond + chr3R_14_22555001 chr3R_22555001 RAL-382 3216 chr3R 22556675 22556711 chr3R 22556762 22556837 15 123 5.0 2.5 3.8 3.1 162 chr3R 22556675 intergenic bond + chr3R 22556756 intergenic bond + chr3R 22556837 intergenic bond + chr3R_15_22555001 chr3R_22555001 RAL-382 3217 chr3R 22597331 22597403 chr3R 22597458 22597465 5 113 2.5 0.0 1.2 2.3 134 chr3R 22597331 intron Efa6 + chr3R 22597398 intron Efa6 + chr3R 22597465 intron Efa6 + chr3R_5_22595001 chr3R_22595001 RAL-382 3218 chr3R 22648282 22648293 chr3R 22648411 22648422 6 129 20.5 1.0 10.8 0.5 140 chr3R 22648282 intron wake + chr3R 22648352 intron wake + chr3R 22648422 intron wake + chr3R_6_22645001 chr3R_22645001 RAL-382 3219 chr3R 22648295 22648335 chr3R 22648409 22648453 18 124 12.0 1.0 6.5 2.4 158 chr3R 22648295 intron wake + chr3R 22648374 intron wake + chr3R 22648453 intron wake + chr3R_18_22645001 chr3R_22645001 RAL-382 3220 chr3R 22769047 22769059 chr3R 22769173 22769186 6 127 17.5 10.0 13.8 0.4 139 chr3R 22769047 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769116 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769186 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_6_22765001 chr3R_22765001 RAL-382 3221 chr3R 22769063 22769123 chr3R 22769170 22769246 29 125 8.5 11.0 9.8 2.7 183 chr3R 22769063 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769154 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769246 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_29_22765001 chr3R_22765001 RAL-382 3222 chr3R 22792223 22792300 chr3R 22792437 22792484 12 202 4.0 5.0 4.5 2.2 261 chr3R 22792223 intron CG7029 + chr3R 22792354 exon CG7029 + chr3R 22792484 exon CG7029 + chr3R_12_22790001 chr3R_22790001 RAL-382 3223 chr3R 22829746 22829811 chr3R 22829878 22829930 27 131 10.0 9.0 9.5 2.6 184 chr3R 22829746 intergenic not near genes chr3R 22829838 intergenic not near genes chr3R 22829930 intergenic not near genes chr3R_27_22825001 chr3R_22825001 RAL-382 3224 chr3R 22853242 22853298 chr3R 22853369 22853410 18 122 7.0 10.5 8.8 1.8 168 chr3R 22853242 intergenic not near genes chr3R 22853326 intergenic not near genes chr3R 22853410 intergenic not near genes chr3R_18_22850001 chr3R_22850001 RAL-382 3225 chr3R 22871402 22871465 chr3R 22871544 22871614 26 147 3.0 8.0 5.5 4.0 212 chr3R 22871402 intergenic not near genes chr3R 22871508 intergenic not near genes chr3R 22871614 intergenic not near genes chr3R_26_22870001 chr3R_22870001 RAL-382 3226 chr3R 22880554 22880614 chr3R 22880678 22880706 16 121 7.5 11.0 9.2 1.6 152 chr3R 22880554 intergenic not near genes chr3R 22880630 intergenic not near genes chr3R 22880706 intergenic not near genes chr3R_16_22880001 chr3R_22880001 RAL-382 3227 chr3R 22880884 22880948 chr3R 22881072 22881136 23 188 8.0 10.0 9.0 2.3 252 chr3R 22880884 intergenic not near genes chr3R 22881010 intergenic not near genes chr3R 22881136 intergenic not near genes chr3R_23_22880001 chr3R_22880001 RAL-382 3228 chr3R 22881184 22881213 chr3R 22884940 22884969 Doc 11 3756 11.0 13.5 12.2 0.8 3785 chr3R 22881184 intergenic not near genes chr3R 22883076 intergenic not near genes chr3R 22884969 intergenic not near genes chr3R_11_22880001 chr3R_22880001 RAL-382 3229 chr3R 22900789 22900854 chr3R 22900919 22900983 11 129 7.0 10.5 8.8 1.1 194 chr3R 22900789 intron klg + chr3R 22900886 intron klg + chr3R 22900983 intron klg + chr3R_11_22900001 chr3R_22900001 RAL-382 3230 chr3R 22927652 22927728 chr3R 22927786 22927843 20 129 6.0 8.5 7.2 2.4 191 chr3R 22927652 intron klg + chr3R 22927748 intron klg + chr3R 22927843 intron klg + chr3R_20_22925001 chr3R_22925001 RAL-382 3231 chr3R 22945916 22945951 chr3R 22946046 22946081 8 130 8.0 5.5 6.8 1.0 165 chr3R 22945916 intron klg + chr3R 22945998 intron klg + chr3R 22946081 intron klg + chr3R_8_22945001 chr3R_22945001 RAL-382 3232 chr3R 22974260 22974308 chr3R 22974394 22974439 12 134 0.0 11.0 5.5 1.8 179 chr3R 22974260 intergenic not near genes chr3R 22974350 intergenic not near genes chr3R 22974439 intergenic not near genes chr3R_12_22970001 chr3R_22970001 RAL-382 3233 chr3R 22993457 22993534 chr3R 22993639 22993719 24 181 7.0 7.5 7.2 2.9 262 chr3R 22993457 intron Nha2 - chr3R 22993588 intron Nha2 - chr3R 22993719 intron Nha2 - chr3R_24_22990001 chr3R_22990001 RAL-382 3234 chr3R 23011332 23011392 chr3R 23011478 23011538 28 146 10.0 10.5 10.2 2.5 206 chr3R 23011332 intergenic not near genes chr3R 23011435 intergenic CR44225 - chr3R 23011538 intergenic CR44225 - chr3R_28_23010001 chr3R_23010001 RAL-382 3235 chr3R 23073620 23073633 chr3R 23073759 23073772 4 138 12.5 5.5 9.0 0.4 152 chr3R 23073620 intron CG13830 - chr3R 23073696 intron CG13830 - chr3R 23073772 intron CG13830 - chr3R_4_23070001 chr3R_23070001 RAL-382 3236 chr3R 23073634 23073689 chr3R 23073742 23073786 18 123 5.5 2.0 3.8 3.8 152 chr3R 23073634 intron CG13830 - chr3R 23073710 intron CG13830 - chr3R 23073786 intron CG13830 - chr3R_18_23070001 chr3R_23070001 RAL-382 3237 chr3R 23082907 23082922 chr3R 23083156 23083171 5 249 22.5 9.5 16.0 0.3 264 chr3R 23082907 intron CG13830 - chr3R 23083039 intron CG13830 - chr3R 23083171 intron CG13830 - chr3R_5_23080001 chr3R_23080001 RAL-382 3238 chr3R 23082925 23082977 chr3R 23083148 23083165 19 235 10.0 7.5 8.8 1.9 240 chr3R 23082925 intron CG13830 - chr3R 23083045 intron CG13830 - chr3R 23083165 intron CG13830 - chr3R_19_23080001 chr3R_23080001 RAL-382 3239 chr3R 23225003 23225031 chr3R 23225129 23225145 12 125 17.5 0.0 8.8 1.2 142 chr3R 23225003 intron cnc - chr3R 23225074 intron cnc - chr3R 23225145 intron cnc - chr3R_12_23225001 chr3R_23225001 RAL-382 3240 chr3R 23318352 23318394 chr3R 23318488 23318551 12 145 0.5 7.0 3.8 2.5 199 chr3R 23318352 intron pnt - chr3R 23318452 intron pnt - chr3R 23318551 intron pnt - chr3R_12_23315001 chr3R_23315001 RAL-382 3241 chr3R 23319656 23319676 chr3R 23319784 23319804 13 128 0.0 18.0 9.0 1.3 148 chr3R 23319656 intron pnt - chr3R 23319730 intron pnt - chr3R 23319804 intron pnt - chr3R_13_23315001 chr3R_23315001 RAL-382 3242 chr3R 23335398 23335462 chr3R 23335515 23335589 19 123 7.5 9.0 8.2 2.1 191 chr3R 23335398 intron pnt - chr3R 23335494 intron pnt - chr3R 23335589 intron pnt - chr3R_19_23335001 chr3R_23335001 RAL-382 3243 chr3R 23356956 23356997 chr3R 23357092 23357133 18 136 11.0 17.5 14.2 1.2 177 chr3R 23356956 intron Sec13 + chr3R 23357044 intron Sec13 + chr3R 23357133 intron Sec13 + chr3R_18_23355001 chr3R_23355001 RAL-382 3244 chr3R 23390917 23390954 chr3R 23391049 23391083 7 130 4.5 7.5 6.0 1.0 166 chr3R 23390917 intergenic CR43387 + chr3R 23391000 intergenic CR43387 + chr3R 23391083 intergenic not near genes chr3R_7_23390001 chr3R_23390001 RAL-382 3245 chr3R 23397043 23397117 chr3R 23397204 23397278 27 158 11.0 6.0 8.5 2.8 235 chr3R 23397043 intergenic not near genes chr3R 23397160 intergenic not near genes chr3R 23397278 intergenic not near genes chr3R_27_23395001 chr3R_23395001 RAL-382 3246 chr3R 23558348 23558425 chr3R 23560179 23560179 Bari1 32 1829 9.5 7.0 8.2 3.5 1831 chr3R 23558348 intron beat-IV + chr3R 23559264 intron beat-IV + chr3R 23560179 intron beat-IV + chr3R_32_23555001 chr3R_23555001 RAL-382 3247 chr3R 23643924 23643952 chr3R 23644054 23644082 18 130 8.0 11.0 9.5 1.7 158 chr3R 23643924 intron CG31145 - chr3R 23644003 intron CG31145 - chr3R 23644082 intron CG31145 - chr3R_18_23640001 chr3R_23640001 RAL-382 3248 chr3R 23675630 23675693 chr3R 23675856 23675927 28 228 0.0 7.5 3.8 5.8 297 chr3R 23675630 intergenic not near genes chr3R 23675778 intergenic not near genes chr3R 23675927 intergenic not near genes chr3R_28_23675001 chr3R_23675001 RAL-382 3249 chr3R 23684646 23684721 chr3R 23685182 23685238 roo 21 523 7.5 7.5 7.5 2.5 592 chr3R 23684646 exon CG18754 + chr3R 23684942 intron CG18754 + chr3R 23685238 exon CG18754 + chr3R_21_23680001 chr3R_23680001 RAL-382 3250 chr3R 23801584 23801662 chr3R 23801879 23801957 41 294 5.0 7.5 6.2 5.7 373 chr3R 23801584 3` UTR mbc + chr3R 23801770 3` UTR CG33111 - chr3R 23801957 3` UTR CG33111 - chr3R_41_23800001 chr3R_23800001 RAL-382 3251 chr3R 23835362 23835429 chr3R 23844562 23844627 roo 15 9199 15.0 0.0 7.5 1.8 9265 chr3R 23835362 intron CG34355 + chr3R 23839994 intron CG34355 + chr3R 23844627 intron CG34355 + chr3R_15_23835001 chr3R_23835001 RAL-382 3252 chr3R 23851037 23851085 chr3R 23858754 23858802 opus 23 7717 7.0 20.5 13.8 1.6 7765 chr3R 23851037 3` UTR CG34355 + chr3R 23854920 intergenic not near genes chr3R 23858802 intergenic not near genes chr3R_23_23850001 chr3R_23850001 RAL-382 3253 chr3R 23864995 23865058 chr3R 23865134 23865197 27 138 8.5 10.5 9.5 2.6 202 chr3R 23864995 intron Pli - chr3R 23865096 intron Pli - chr3R 23865197 intron Pli - chr3R_27_23865001 chr3R_23865001 RAL-382 3254 chr3R 23873952 23873968 chr3R 23874069 23874069 5 112 19.5 22.0 20.8 0.2 117 chr3R 23873952 intron Pli - chr3R 23874010 intron Pli - chr3R 23874069 intron Pli - chr3R_5_23870001 chr3R_23870001 RAL-382 3255 chr3R 23884261 23884306 chr3R 23884395 23884440 13 133 10.5 9.5 10.0 1.2 179 chr3R 23884261 intron Pli - chr3R 23884350 intron Pli - chr3R 23884440 intron Pli - chr3R_13_23880001 chr3R_23880001 RAL-382 3256 chr3R 23888043 23888106 chr3R 23888179 23888242 33 135 10.5 13.0 11.8 2.6 199 chr3R 23888043 intron Pli - chr3R 23888142 intron Pli - chr3R 23888242 intron Pli - chr3R_33_23885001 chr3R_23885001 RAL-382 3257 chr3R 23944861 23944934 chr3R 23944996 23945043 18 129 5.5 7.5 6.5 2.4 182 chr3R 23944861 intron CG12268 - chr3R 23944952 intron CG12268 - chr3R 23945043 exon CG12268 - chr3R_18_23940001 chr3R_23940001 RAL-382 3258 chr3R 24011619 24011679 chr3R 24011752 24011812 11 133 3.0 0.5 1.8 3.9 193 chr3R 24011619 intron KrT95D - chr3R 24011716 intron KrT95D - chr3R 24011812 intron KrT95D - chr3R_11_24010001 chr3R_24010001 RAL-382 3259 chr3R 24072065 24072120 chr3R 24072532 24072606 jockey 16 479 4.5 0.0 2.2 5.0 541 chr3R 24072065 intron 4EHP - chr3R 24072336 intron 4EHP - chr3R 24072606 intron 4EHP - chr3R_16_24070001 chr3R_24070001 RAL-382 3260 chr3R 24076895 24076940 chr3R 24078387 24078457 hobo 16 1511 5.5 7.5 6.5 2.1 1562 chr3R 24076895 intron 4EHP - chr3R 24077676 intron 4EHP - chr3R 24078457 intron 4EHP - chr3R_16_24075001 chr3R_24075001 RAL-382 3261 chr3R 24173504 24173580 chr3R 24173636 24173712 27 132 5.0 7.0 6.0 3.9 208 chr3R 24173504 intron CG13606 + chr3R 24173608 intron CG13606 + chr3R 24173712 intron CG13606 + chr3R_27_24170001 chr3R_24170001 RAL-382 3262 chr3R 24207193 24207237 chr3R 24212296 24212362 flea 18 5121 14.0 14.5 14.2 1.2 5169 chr3R 24207193 intron twin - chr3R 24209778 intron twin - chr3R 24212362 intron twin - chr3R_18_24205001 chr3R_24205001 RAL-382 3263 chr3R 24426236 24426308 chr3R 24426543 24426615 34 306 6.5 5.0 5.8 5.0 379 chr3R 24426236 intron nAChRalpha1 - chr3R 24426426 intron nAChRalpha1 - chr3R 24426615 intron nAChRalpha1 - chr3R_34_24425001 chr3R_24425001 RAL-382 3264 chr3R 24431549 24431621 chr3R 24431678 24431750 24 127 6.0 0.5 3.2 5.7 201 chr3R 24431549 intron nAChRalpha1 - chr3R 24431650 intron nAChRalpha1 - chr3R 24431750 intron nAChRalpha1 - chr3R_24_24430001 chr3R_24430001 RAL-382 3265 chr3R 24481736 24481762 chr3R 24481878 24481904 9 140 14.5 10.0 12.2 0.7 168 chr3R 24481736 intergenic not near genes chr3R 24481820 intergenic not near genes chr3R 24481904 intergenic not near genes chr3R_9_24480001 chr3R_24480001 RAL-382 3266 chr3R 24481763 24481777 chr3R 24481854 24481919 6 133 9.0 6.5 7.8 0.7 156 chr3R 24481763 intergenic not near genes chr3R 24481841 intergenic not near genes chr3R 24481919 intergenic not near genes chr3R_6_24480001 chr3R_24480001 RAL-382 3267 chr3R 24482884 24482930 chr3R 24483012 24483068 8 133 8.0 11.5 9.8 0.7 184 chr3R 24482884 intergenic not near genes chr3R 24482976 intergenic not near genes chr3R 24483068 intergenic not near genes chr3R_8_24480001 chr3R_24480001 RAL-382 3268 chr3R 24485731 24485793 chr3R 24485876 24485904 6 141 4.0 2.0 3.0 1.5 173 chr3R 24485731 5` UTR nAChRalpha2 + chr3R 24485818 5` UTR nAChRalpha2 + chr3R 24485904 5` UTR nAChRalpha2 + chr3R_6_24485001 chr3R_24485001 RAL-382 3269 chr3R 24491419 24491482 chr3R 24491561 24491624 30 140 10.0 11.0 10.5 2.6 205 chr3R 24491419 intergenic nAChRalpha2 + chr3R 24491522 intergenic nAChRalpha2 + chr3R 24491624 intergenic nAChRalpha2 + chr3R_30_24490001 chr3R_24490001 RAL-382 3270 chr3R 24493235 24493299 chr3R 24493514 24493578 BS 20 279 6.0 10.0 8.0 2.2 343 chr3R 24493235 intergenic not near genes chr3R 24493406 intergenic not near genes chr3R 24493578 intergenic not near genes chr3R_20_24490001 chr3R_24490001 RAL-382 3271 chr3R 24495242 24495311 chr3R 24495371 24495411 33 125 12.0 10.0 11.0 2.8 169 chr3R 24495242 intergenic not near genes chr3R 24495326 intergenic not near genes chr3R 24495411 intergenic not near genes chr3R_33_24495001 chr3R_24495001 RAL-382 3272 chr3R 24523853 24523926 chr3R 24523989 24524062 22 136 4.0 5.5 4.8 3.8 209 chr3R 24523853 intergenic CG13622 - chr3R 24523958 intergenic CG13622 - chr3R 24524062 intergenic CG13622 - chr3R_22_24520001 chr3R_24520001 RAL-382 3273 chr3R 24527764 24527829 chr3R 24527905 24527970 27 141 5.0 7.0 6.0 3.9 206 chr3R 24527764 intergenic CG13618 +,CG6607 + chr3R 24527867 intergenic CG6607 +,CG13618 + chr3R 24527970 intergenic CG6607 +,CG13618 + chr3R_27_24525001 chr3R_24525001 RAL-382 3274 chr3R 24594628 24594668 chr3R 24594918 24594926 pogo 14 284 7.5 13.0 10.2 1.2 298 chr3R 24594628 intron mld + chr3R 24594777 intron mld + chr3R 24594926 intron mld + chr3R_14_24590001 chr3R_24590001 RAL-382 3275 chr3R 24667559 24667596 chr3R 24667686 24667723 18 127 14.5 0.0 7.2 2.2 164 chr3R 24667559 intron slo + chr3R 24667641 intron slo + chr3R 24667723 intron slo + chr3R_18_24665001 chr3R_24665001 RAL-382 3276 chr3R 24670006 24670194 chr3R 24670166 24670329 39 155 0.0 0.0 0.0 39.0 323 chr3R 24670006 intron slo + chr3R 24670168 intron slo + chr3R 24670329 intron slo + chr3R_39_24670001 chr3R_24670001 RAL-382 3277 chr3R 24671172 24671250 chr3R 24671299 24671352 15 112 6.5 8.5 7.5 1.8 180 chr3R 24671172 intron slo + chr3R 24671262 intron slo + chr3R 24671352 intron slo + chr3R_15_24670001 chr3R_24670001 RAL-382 3278 chr3R 24729145 24729193 chr3R 24729247 24729315 16 110 8.5 8.5 8.5 1.7 170 chr3R 24729145 intron tok + chr3R 24729230 intron tok + chr3R 24729315 intron tok + chr3R_16_24725001 chr3R_24725001 RAL-382 3279 chr3R 24730064 24730103 chr3R 24732476 24732496 Doc 4 2415 8.5 2.0 5.2 0.6 2432 chr3R 24730064 intron tok + chr3R 24731280 intron tok + chr3R 24732496 intron tok + chr3R_4_24730001 chr3R_24730001 RAL-382 3280 chr3R 24791949 24792038 chr3R 24792077 24792148 18 126 0.0 0.5 0.2 15.0 199 chr3R 24791949 intron Ets96B + chr3R 24792048 intron Ets96B + chr3R 24792148 intron Ets96B + chr3R_18_24790001 chr3R_24790001 RAL-382 3281 chr3R 24825568 24825639 chr3R 24825711 24825783 18 147 4.5 0.0 2.2 5.6 215 chr3R 24825568 5` UTR niki - chr3R 24825676 intergenic niki -,CG43166 - chr3R 24825783 intergenic CG43166 -,niki - chr3R_18_24825001 chr3R_24825001 RAL-382 3282 chr3R 24842055 24842132 chr3R 24842191 24842268 30 133 8.0 9.0 8.5 3.2 213 chr3R 24842055 5` UTR Esp + chr3R 24842162 5` UTR Esp + chr3R 24842268 5` UTR Esp + chr3R_30_24840001 chr3R_24840001 RAL-382 3283 chr3R 24845951 24846003 chr3R 24846091 24846143 19 138 9.0 5.5 7.2 2.3 192 chr3R 24845951 intron Esp + chr3R 24846047 intron Esp + chr3R 24846143 intron Esp + chr3R_19_24845001 chr3R_24845001 RAL-382 3284 chr3R 24846007 24846017 chr3R 24846083 24846157 5 124 5.5 4.0 4.8 0.9 150 chr3R 24846007 intron Esp + chr3R 24846082 intron Esp + chr3R 24846157 intron Esp + chr3R_5_24845001 chr3R_24845001 RAL-382 3285 chr3R 24912437 24912506 chr3R 24912569 24912638 21 132 8.5 0.0 4.2 4.0 201 chr3R 24912437 intergenic not near genes chr3R 24912538 intergenic CR44267 + chr3R 24912638 intergenic CR44267 + chr3R_21_24910001 chr3R_24910001 RAL-382 3286 chr3R 24927086 24927147 chr3R 24931927 24931982 Doc 29 4840 12.0 10.5 11.2 2.4 4896 chr3R 24927086 intergenic Trf4-2 + chr3R 24929534 intergenic not near genes chr3R 24931982 intergenic CG11771 + chr3R_29_24925001 chr3R_24925001 RAL-382 3287 chr3R 24974862 24974931 chr3R 24974991 24975060 39 126 4.5 13.0 8.8 4.0 198 chr3R 24974862 intergenic not near genes chr3R 24974961 intergenic not near genes chr3R 24975060 intergenic not near genes chr3R_39_24970001 chr3R_24970001 RAL-382 3288 chr3R 25004857 25004916 chr3R 25004990 25005049 22 130 10.5 7.5 9.0 2.2 192 chr3R 25004857 intron tnc + chr3R 25004953 intron tnc + chr3R 25005049 intron tnc + chr3R_22_25000001 chr3R_25000001 RAL-382 3289 chr3R 25027495 25027564 chr3R 25027758 25027827 36 262 12.5 7.5 10.0 3.3 332 chr3R 25027495 intron Hr96 + chr3R 25027661 intron Hr96 + chr3R 25027827 intron Hr96 + chr3R_36_25025001 chr3R_25025001 RAL-382 3290 chr3R 25126010 25126062 chr3R 25126654 25126706 5 642 37.0 39.5 38.2 0.1 696 chr3R 25126010 3` UTR,exon CG42503 -,Mocs2 - chr3R 25126358 3` UTR,exon CG42503 -,Mocs2 - chr3R 25126706 3` UTR,exon CG42503 -,Mocs2 - chr3R_5_25125001 chr3R_25125001 RAL-382 3291 chr3R 25136354 25136425 chr3R 25136484 25136553 38 130 12.0 10.5 11.2 3.1 199 chr3R 25136354 3` UTR Bili + chr3R 25136454 3` UTR Bili + chr3R 25136553 3` UTR Bili + chr3R_38_25135001 chr3R_25135001 RAL-382 3292 chr3R 25166154 25166359 chr3R 25166281 25166485 29 128 0.0 0.0 0.0 29.0 331 chr3R 25166154 intergenic not near genes chr3R 25166320 intergenic not near genes chr3R 25166485 intergenic not near genes chr3R_29_25165001 chr3R_25165001 RAL-382 3293 chr3R 25200497 25200572 chr3R 25200628 25200703 31 127 9.5 10.0 9.8 2.9 206 chr3R 25200497 intron,intron Cad96Ca -,CG13654 + chr3R 25200600 intron,intron Cad96Ca -,CG13654 + chr3R 25200703 intron,intron Cad96Ca -,CG13654 + chr3R_31_25200001 chr3R_25200001 RAL-382 3294 chr3R 25233902 25233963 chr3R 25234039 25234089 21 134 8.5 5.5 7.0 2.6 187 chr3R 25233902 3` UTR CG10420 - chr3R 25233996 3` UTR CG10420 - chr3R 25234089 exon CG10420 - chr3R_21_25230001 chr3R_25230001 RAL-382 3295 chr3R 25272045 25272114 chr3R 25272172 25272229 12 119 0.0 8.0 4.0 2.4 184 chr3R 25272045 3` UTR,exon CG11889 +,CG11891 + chr3R 25272137 3` UTR,exon CG11889 +,CG11891 + chr3R 25272229 3` UTR,exon CG11889 +,CG11891 + chr3R_12_25270001 chr3R_25270001 RAL-382 3296 chr3R 25368427 25368502 chr3R 25368595 25368674 26 166 4.5 0.0 2.2 8.1 247 chr3R 25368427 intron Fur1 - chr3R 25368550 intron Fur1 - chr3R 25368674 intron Fur1 - chr3R_26_25365001 chr3R_25365001 RAL-382 3297 chr3R 25464452 25464519 chr3R 25464819 25464886 28 364 6.0 11.0 8.5 2.9 434 chr3R 25464452 intron Fur1 - chr3R 25464669 intron Fur1 - chr3R 25464886 intron Fur1 - chr3R_28_25460001 chr3R_25460001 RAL-382 3298 chr3R 25511629 25511648 chr3R 25511759 25511777 7 130 18.0 9.0 13.5 0.5 148 chr3R 25511629 intergenic not near genes chr3R 25511703 intergenic not near genes chr3R 25511777 intergenic not near genes chr3R_7_25510001 chr3R_25510001 RAL-382 3299 chr3R 25511654 25511699 chr3R 25511754 25511829 18 122 6.5 8.5 7.5 2.1 175 chr3R 25511654 intergenic not near genes chr3R 25511742 intergenic not near genes chr3R 25511829 intergenic not near genes chr3R_18_25510001 chr3R_25510001 RAL-382 3300 chr3R 25549902 25549939 chr3R 25550009 25550070 14 132 5.0 7.0 6.0 2.0 168 chr3R 25549902 intron msi + chr3R 25549986 intron msi + chr3R 25550070 intron msi + chr3R_14_25545001 chr3R_25545001 RAL-382 3301 chr3R 25591362 25591415 chr3R 25591490 25591543 17 128 12.5 0.0 6.2 2.4 181 chr3R 25591362 intron msi + chr3R 25591452 intron msi + chr3R 25591543 intron,3` UTR msi +,ymp - chr3R_17_25590001 chr3R_25590001 RAL-382 3302 chr3R 25614841 25614909 chr3R 25615156 25615217 15 314 8.5 8.0 8.2 1.6 376 chr3R 25614841 intron Npl4 - chr3R 25615029 intron Npl4 - chr3R 25615217 intron Npl4 - chr3R_15_25615001 chr3R_25615001 RAL-382 3303 chr3R 25671191 25671269 chr3R 25671339 25671419 24 150 6.0 6.5 6.2 3.3 228 chr3R 25671191 intron Lgr3 + chr3R 25671305 intron Lgr3 + chr3R 25671419 intron Lgr3 + chr3R_24_25670001 chr3R_25670001 RAL-382 3304 chr3R 25720767 25720779 chr3R 25720909 25720921 8 141 9.0 9.5 9.2 0.8 154 chr3R 25720767 intron LpR2 - chr3R 25720844 intron LpR2 - chr3R 25720921 intron LpR2 - chr3R_8_25720001 chr3R_25720001 RAL-382 3305 chr3R 25720782 25720830 chr3R 25720902 25720965 12 137 0.0 8.0 4.0 2.4 183 chr3R 25720782 intron LpR2 - chr3R 25720874 intron LpR2 - chr3R 25720965 intron LpR2 - chr3R_12_25720001 chr3R_25720001 RAL-382 3306 chr3R 25725788 25725849 chr3R 25734998 25735059 roo 25 9210 10.5 14.0 12.2 1.9 9271 chr3R 25725788 intron LpR2 - chr3R 25730424 intron LpR2 - chr3R 25735059 intron LpR2 - chr3R_25_25730001 chr3R_25730001 RAL-382 3307 chr3R 25765829 25765906 chr3R 25765958 25766013 26 123 9.0 6.5 7.8 3.0 184 chr3R 25765829 intergenic not near genes chr3R 25765921 intergenic not near genes chr3R 25766013 intergenic not near genes chr3R_26_25765001 chr3R_25765001 RAL-382 3308 chr3R 25801217 25801284 chr3R 25802251 25802307 14 1033 7.0 8.0 7.5 1.6 1090 chr3R 25801217 intergenic not near genes chr3R 25801762 intergenic not near genes chr3R 25802307 intergenic not near genes chr3R_14_25800001 chr3R_25800001 RAL-382 3309 chr3R 25810265 25810340 chr3R 25810414 25810460 28 146 6.5 10.0 8.2 3.0 195 chr3R 25810265 intergenic not near genes chr3R 25810362 intergenic not near genes chr3R 25810460 intergenic not near genes chr3R_28_25810001 chr3R_25810001 RAL-382 3310 chr3R 25832663 25832678 chr3R 25841895 25841910 roo 6 9232 10.5 10.0 10.2 0.5 9247 chr3R 25832663 exon alpha4GT2 + chr3R 25837286 intron alpha4GT2 + chr3R 25841910 exon alpha4GT2 + chr3R_6_25835001 chr3R_25835001 RAL-382 3311 chr3R 25832680 25832710 chr3R 25841882 25841940 roo 15 9225 4.0 8.5 6.2 2.1 9260 chr3R 25832680 exon alpha4GT2 + chr3R 25837310 intron alpha4GT2 + chr3R 25841940 exon alpha4GT2 + chr3R_15_25835001 chr3R_25835001 RAL-382 3312 chr3R 25843595 25843653 chr3R 25843775 25843833 24 180 6.5 8.5 7.5 2.8 238 chr3R 25843595 intergenic CR45653 + chr3R 25843714 intergenic CR45653 + chr3R 25843833 intergenic CR45653 + chr3R_24_25840001 chr3R_25840001 RAL-382 3313 chr3R 25861777 25861848 chr3R 25861904 25861975 41 126 11.0 11.0 11.0 3.4 198 chr3R 25861777 intron CG5890 + chr3R 25861876 intron CG5890 + chr3R 25861975 intron CG5890 + chr3R_41_25860001 chr3R_25860001 RAL-382 3314 chr3R 25927465 25927534 chr3R 25927597 25927664 22 132 7.0 1.5 4.2 4.2 199 chr3R 25927465 intron CCAP-R - chr3R 25927564 intron CCAP-R - chr3R 25927664 intron CCAP-R - chr3R_22_25925001 chr3R_25925001 RAL-382 3315 chr3R 25951173 25951251 chr3R 25951599 25951676 28 420 10.5 3.5 7.0 3.5 503 chr3R 25951173 intron CCAP-R - chr3R 25951424 intron CCAP-R - chr3R 25951676 intron CCAP-R - chr3R_28_25950001 chr3R_25950001 RAL-382 3316 chr3R 25962696 25962716 chr3R 25962826 25962833 7 126 8.5 21.5 15.0 0.4 137 chr3R 25962696 intron boss + chr3R 25962764 intron boss + chr3R 25962833 intron boss + chr3R_7_25960001 chr3R_25960001 RAL-382 3317 chr3R 25997206 25997268 chr3R 25997343 25997405 20 137 12.0 7.0 9.5 1.9 199 chr3R 25997206 intergenic CG43116 -,E(spl)mdelta-HLH + chr3R 25997306 intergenic CG43116 -,E(spl)mdelta-HLH + chr3R 25997405 intergenic E(spl)mdelta-HLH +,CG43116 - chr3R_20_25995001 chr3R_25995001 RAL-382 3318 chr3R 26013806 26013862 chr3R 26013936 26013992 31 129 8.5 12.5 10.5 2.7 186 chr3R 26013806 intergenic not near genes chr3R 26013899 intergenic not near genes chr3R 26013992 intergenic not near genes chr3R_31_26010001 chr3R_26010001 RAL-382 3319 chr3R 26038925 26038998 chr3R 26039112 26039185 24 187 8.5 0.0 4.2 4.6 260 chr3R 26038925 intergenic not near genes chr3R 26039055 intergenic not near genes chr3R 26039185 intergenic not near genes chr3R_24_26035001 chr3R_26035001 RAL-382 3320 chr3R 26061691 26061761 chr3R 26061838 26061908 43 146 0.0 11.5 5.8 6.3 217 chr3R 26061691 intron CG14551 - chr3R 26061800 intron CG14551 - chr3R 26061908 intron CG14551 - chr3R_43_26060001 chr3R_26060001 RAL-382 3321 chr3R 26122413 26122480 chr3R 26122539 26122605 14 125 12.0 9.5 10.8 1.2 192 chr3R 26122413 intron CG31324 + chr3R 26122509 intron CG31324 + chr3R 26122605 intron CG31324 + chr3R_14_26120001 chr3R_26120001 RAL-382 3322 chr3R 26140470 26140546 chr3R 26140633 26140709 36 162 10.5 9.0 9.8 3.3 239 chr3R 26140470 intergenic not near genes chr3R 26140590 intergenic not near genes chr3R 26140709 intergenic not near genes chr3R_36_26140001 chr3R_26140001 RAL-382 3323 chr3R 26180992 26181072 chr3R 26181125 26181204 24 131 7.5 7.5 7.5 2.8 212 chr3R 26180992 intron CG31323 + chr3R 26181098 intron CG31323 + chr3R 26181204 intron CG31323 + chr3R_24_26180001 chr3R_26180001 RAL-382 3324 chr3R 26283562 26283587 chr3R 26284088 26284113 6 522 11.5 4.0 7.8 0.7 551 chr3R 26283562 intergenic not near genes chr3R 26283838 intergenic not near genes chr3R 26284113 intergenic not near genes chr3R_6_26280001 chr3R_26280001 RAL-382 3325 chr3R 26292087 26292136 chr3R 26292217 26292252 16 129 7.5 4.5 6.0 2.3 165 chr3R 26292087 intergenic not near genes chr3R 26292170 intergenic not near genes chr3R 26292252 intergenic not near genes chr3R_16_26290001 chr3R_26290001 RAL-382 3326 chr3R 26294675 26294743 chr3R 26294803 26294871 27 125 8.5 9.5 9.0 2.7 196 chr3R 26294675 intergenic not near genes chr3R 26294773 intergenic not near genes chr3R 26294871 intergenic not near genes chr3R_27_26290001 chr3R_26290001 RAL-382 3327 chr3R 26307019 26307097 chr3R 26307266 26307344 40 247 5.0 7.5 6.2 5.6 325 chr3R 26307019 intergenic not near genes chr3R 26307182 intergenic not near genes chr3R 26307344 intergenic not near genes chr3R_40_26305001 chr3R_26305001 RAL-382 3328 chr3R 26326656 26326680 chr3R 26326784 26326808 11 128 7.5 12.5 10.0 1.0 152 chr3R 26326656 intron CG33970 + chr3R 26326732 intron CG33970 + chr3R 26326808 intron CG33970 + chr3R_11_26325001 chr3R_26325001 RAL-382 3329 chr3R 26376282 26376355 chr3R 26385492 26385580 roo 24 9209 6.0 0.0 3.0 6.0 9298 chr3R 26376282 intergenic not near genes chr3R 26380931 intergenic not near genes chr3R 26385580 intergenic not near genes chr3R_24_26380001 chr3R_26380001 RAL-382 3330 chr3R 26405874 26405935 chr3R 26406000 26406061 21 126 0.0 0.0 0.0 21.0 187 chr3R 26405874 intergenic not near genes chr3R 26405968 intergenic not near genes chr3R 26406061 intergenic not near genes chr3R_21_26405001 chr3R_26405001 RAL-382 3331 chr3R 26461166 26461242 chr3R 26461328 26461404 38 161 6.0 7.5 6.8 4.9 238 chr3R 26461166 intergenic CG14238 +,CG5455 + chr3R 26461285 intergenic CG5455 +,CG14238 + chr3R 26461404 intergenic CG5455 +,CG14238 + chr3R_38_26460001 chr3R_26460001 RAL-382 3332 chr3R 26510472 26510532 chr3R 26519577 26519637 roo 25 9105 5.5 7.5 6.5 3.3 9165 chr3R 26510472 intron plum - chr3R 26515054 intron plum - chr3R 26519637 intron,5` UTR plum -,CR45226 + chr3R_25_26515001 chr3R_26515001 RAL-382 3333 chr3R 26540948 26541029 chr3R 26541078 26541158 30 129 2.5 8.5 5.5 4.6 210 chr3R 26540948 intron scrib + chr3R 26541053 intron scrib + chr3R 26541158 intron scrib + chr3R_30_26540001 chr3R_26540001 RAL-382 3334 chr3R 26544463 26544532 chr3R 26544589 26544637 29 127 9.0 7.5 8.2 3.2 174 chr3R 26544463 intron scrib + chr3R 26544550 intron scrib + chr3R 26544637 intron scrib + chr3R_29_26540001 chr3R_26540001 RAL-382 3335 chr3R 26545961 26546008 chr3R 26546190 26546240 8 231 9.0 3.5 6.2 1.1 279 chr3R 26545961 intron scrib + chr3R 26546100 intron scrib + chr3R 26546240 intron scrib + chr3R_8_26545001 chr3R_26545001 RAL-382 3336 chr3R 26546011 26546019 chr3R 26546188 26546251 5 217 8.0 3.5 5.8 0.7 240 chr3R 26546011 intron scrib + chr3R 26546131 intron scrib + chr3R 26546251 intron scrib + chr3R_5_26545001 chr3R_26545001 RAL-382 3337 chr3R 26558280 26558297 chr3R 26565643 26565660 Stalker4 11 7361 16.5 9.5 13.0 0.8 7380 chr3R 26558280 intron scrib + chr3R 26561970 intron scrib + chr3R 26565660 intron scrib + chr3R_11_26560001 chr3R_26560001 RAL-382 3338 chr3R 26558308 26558351 chr3R 26565638 26565708 Stalker4 9 7340 6.0 9.0 7.5 1.1 7400 chr3R 26558308 intron scrib + chr3R 26562008 intron scrib + chr3R 26565708 intron scrib + chr3R_9_26560001 chr3R_26560001 RAL-382 3339 chr3R 26607713 26607765 chr3R 26607817 26607891 17 123 7.5 6.0 6.8 2.2 178 chr3R 26607713 5` UTR CR44951 + chr3R 26607802 5` UTR CR44951 + chr3R 26607891 5` UTR CR44951 + chr3R_17_26605001 chr3R_26605001 RAL-382 3340 chr3R 26616179 26616196 chr3R 26616318 26616335 6 139 20.5 10.5 15.5 0.4 156 chr3R 26616179 intergenic not near genes chr3R 26616257 intergenic not near genes chr3R 26616335 intergenic not near genes chr3R_6_26615001 chr3R_26615001 RAL-382 3341 chr3R 26616197 26616239 chr3R 26616316 26616378 24 136 13.0 9.0 11.0 2.0 181 chr3R 26616197 intergenic not near genes chr3R 26616288 intergenic not near genes chr3R 26616378 intergenic not near genes chr3R_24_26615001 chr3R_26615001 RAL-382 3342 chr3R 26642688 26642746 chr3R 26643131 26643189 jockey 25 443 12.5 11.0 11.8 2.0 501 chr3R 26642688 intergenic not near genes chr3R 26642938 intergenic not near genes chr3R 26643189 intergenic not near genes chr3R_25_26640001 chr3R_26640001 RAL-382 3343 chr3R 26659895 26659971 chr3R 26660046 26660120 27 149 4.5 6.5 5.5 4.2 225 chr3R 26659895 intron beat-VII - chr3R 26660008 intron beat-VII - chr3R 26660120 intron beat-VII - chr3R_27_26660001 chr3R_26660001 RAL-382 3344 chr3R 26675230 26675231 chr3R 26677936 26678016 26 2711 51.0 53.0 52.0 0.5 2786 chr3R 26675230 intron beat-VII - chr3R 26676623 intron beat-VII - chr3R 26678016 intron beat-VII - chr3R_26_26675001 chr3R_26675001 RAL-382 3345 chr3R 26685815 26685873 chr3R 26686045 26686103 18 223 7.0 10.5 8.8 1.8 288 chr3R 26685815 intergenic not near genes chr3R 26685959 intergenic not near genes chr3R 26686103 intergenic not near genes chr3R_18_26685001 chr3R_26685001 RAL-382 3346 chr3R 26688813 26688864 chr3R 26688941 26688992 24 128 10.0 10.5 10.2 2.1 179 chr3R 26688813 intergenic not near genes chr3R 26688902 intergenic not near genes chr3R 26688992 intergenic not near genes chr3R_24_26685001 chr3R_26685001 RAL-382 3347 chr3R 26743719 26743724 chr3R 26743860 26743865 4 141 13.0 7.0 10.0 0.4 146 chr3R 26743719 intergenic not near genes chr3R 26743792 intergenic not near genes chr3R 26743865 intergenic not near genes chr3R_4_26740001 chr3R_26740001 RAL-382 3348 chr3R 26743734 26743763 chr3R 26743858 26743904 7 133 8.0 7.0 7.5 0.8 170 chr3R 26743734 intergenic not near genes chr3R 26743819 intergenic not near genes chr3R 26743904 intergenic not near genes chr3R_7_26740001 chr3R_26740001 RAL-382 3349 chr3R 26755665 26755726 chr3R 26755791 26755852 18 125 10.5 5.5 8.0 2.0 187 chr3R 26755665 intergenic not near genes chr3R 26755758 intergenic not near genes chr3R 26755852 intergenic not near genes chr3R_18_26755001 chr3R_26755001 RAL-382 3350 chr3R 26767327 26767394 chr3R 26767455 26767495 16 123 6.0 7.5 6.8 2.1 168 chr3R 26767327 intergenic not near genes chr3R 26767411 intergenic not near genes chr3R 26767495 intergenic not near genes chr3R_16_26765001 chr3R_26765001 RAL-382 3351 chr3R 26770197 26770265 chr3R 26770324 26770392 24 124 9.0 9.0 9.0 2.4 195 chr3R 26770197 intergenic CR45563 + chr3R 26770294 intergenic CR45563 + chr3R 26770392 intergenic not near genes chr3R_24_26770001 chr3R_26770001 RAL-382 3352 chr3R 26803525 26803591 chr3R 26803896 26803962 29 369 6.5 9.5 8.0 3.2 437 chr3R 26803525 intron Tl + chr3R 26803744 intron Tl + chr3R 26803962 intron Tl + chr3R_29_26800001 chr3R_26800001 RAL-382 3353 chr3R 26810508 26810575 chr3R 26811043 26811094 roo 29 532 6.5 10.5 8.5 3.1 586 chr3R 26810508 intron Tl + chr3R 26810801 intron Tl + chr3R 26811094 intron Tl + chr3R_29_26810001 chr3R_26810001 RAL-382 3354 chr3R 26819713 26819751 chr3R 26819842 26819880 16 129 5.5 9.0 7.2 2.0 167 chr3R 26819713 intron Tl + chr3R 26819796 intron Tl + chr3R 26819880 intron Tl + chr3R_16_26815001 chr3R_26815001 RAL-382 3355 chr3R 26923982 26924063 chr3R 26924123 26924218 12 152 6.0 0.0 3.0 3.0 236 chr3R 26923982 intron sda + chr3R 26924100 intron sda + chr3R 26924218 intron sda + chr3R_12_26920001 chr3R_26920001 RAL-382 3356 chr3R 26955239 26955309 chr3R 26955367 26955437 21 124 3.5 7.0 5.2 3.4 198 chr3R 26955239 intron CG6330 - chr3R 26955338 intron CG6330 - chr3R 26955437 intron CG6330 - chr3R_21_26955001 chr3R_26955001 RAL-382 3357 chr3R 27007360 27007426 chr3R 27016545 27016611 roo 36 9183 15.0 8.0 11.5 2.9 9251 chr3R 27007360 intron RYa-R + chr3R 27011986 intron RYa-R + chr3R 27016611 intron RYa-R + chr3R_36_27010001 chr3R_27010001 RAL-382 3358 chr3R 27027630 27027696 chr3R 27027764 27027828 26 134 5.5 5.5 5.5 4.0 198 chr3R 27027630 intron RYa-R + chr3R 27027729 intron RYa-R + chr3R 27027828 intron RYa-R + chr3R_26_27025001 chr3R_27025001 RAL-382 3359 chr3R 27028677 27028749 chr3R 27028806 27028878 29 129 6.5 8.5 7.5 3.4 201 chr3R 27028677 exon RYa-R + chr3R 27028778 intron RYa-R + chr3R 27028878 intron RYa-R + chr3R_29_27025001 chr3R_27025001 RAL-382 3360 chr3R 27030172 27030246 chr3R 27030351 27030423 20 178 6.5 0.0 3.2 4.8 251 chr3R 27030172 intron RYa-R + chr3R 27030298 intron RYa-R + chr3R 27030423 intron RYa-R + chr3R_20_27030001 chr3R_27030001 RAL-382 3361 chr3R 27038561 27038624 chr3R 27038697 27038760 30 136 7.5 6.0 6.8 3.8 199 chr3R 27038561 intron RYa-R + chr3R 27038660 intron RYa-R + chr3R 27038760 intron RYa-R + chr3R_30_27035001 chr3R_27035001 RAL-382 3362 chr3R 27077049 27077069 chr3R 27077179 27077193 5 129 24.0 10.5 17.2 0.3 144 chr3R 27077049 intron CG14257 + chr3R 27077121 intron CG14257 + chr3R 27077193 intron CG14257 + chr3R_5_27075001 chr3R_27075001 RAL-382 3363 chr3R 27077072 27077122 chr3R 27077178 27077252 20 127 12.0 10.0 11.0 1.7 180 chr3R 27077072 intron CG14257 + chr3R 27077162 intron CG14257 + chr3R 27077252 intron CG14257 + chr3R_20_27075001 chr3R_27075001 RAL-382 3364 chr3R 27101161 27101194 chr3R 27101299 27101306 16 133 7.5 13.0 10.2 1.4 145 chr3R 27101161 intergenic CG17189 + chr3R 27101234 intergenic CG17189 + chr3R 27101306 intergenic CG17189 + chr3R_16_27100001 chr3R_27100001 RAL-382 3365 chr3R 27140470 27140539 chr3R 27148130 27148194 412 27 7658 11.0 6.5 8.8 2.8 7724 chr3R 27140470 intron CG6051 - chr3R 27144332 intron CG6051 - chr3R 27148194 intron CG6051 - chr3R_27_27140001 chr3R_27140001 RAL-382 3366 chr3R 27300810 27300876 chr3R 27300951 27301001 26 138 6.0 7.5 6.8 3.3 191 chr3R 27300810 intron CG3339 - chr3R 27300906 intron CG3339 - chr3R 27301001 intron CG3339 - chr3R_26_27300001 chr3R_27300001 RAL-382 3367 chr3R 27301228 27301302 chr3R 27301365 27301438 36 135 6.5 9.5 8.0 4.0 210 chr3R 27301228 intron CG3339 - chr3R 27301333 intron CG3339 - chr3R 27301438 intron CG3339 - chr3R_36_27300001 chr3R_27300001 RAL-382 3368 chr3R 27329428 27329498 chr3R 27329555 27329625 40 126 9.0 11.5 10.2 3.6 197 chr3R 27329428 intergenic CG3330 - chr3R 27329526 intergenic CG3330 - chr3R 27329625 intergenic CG3330 - chr3R_40_27325001 chr3R_27325001 RAL-382 3369 chr3R 27342751 27342820 chr3R 27351382 27351451 Tirant 24 8628 7.5 12.0 9.8 2.2 8700 chr3R 27342751 intron CG42534 + chr3R 27347101 intron CG42534 + chr3R 27351451 intron CG42534 + chr3R_24_27345001 chr3R_27345001 RAL-382 3370 chr3R 27382887 27382937 chr3R 27383527 27383556 7 636 4.0 6.5 5.2 1.1 669 chr3R 27382887 intron side - chr3R 27383222 intron side - chr3R 27383556 intron side - chr3R_7_27380001 chr3R_27380001 RAL-382 3371 chr3R 27492334 27492396 chr3R 27492471 27492512 30 135 0.5 0.5 0.5 20.0 178 chr3R 27492334 intergenic not near genes chr3R 27492423 intergenic not near genes chr3R 27492512 intergenic not near genes chr3R_30_27490001 chr3R_27490001 RAL-382 3372 chr3R 27521118 27521174 chr3R 27530377 27530433 roo 31 9259 10.5 20.0 15.2 1.9 9315 chr3R 27521118 intron CG12885 + chr3R 27525776 intron CG12885 + chr3R 27530433 intron CG12885 + chr3R_31_27525001 chr3R_27525001 RAL-382 3373 chr3R 27535736 27535806 chr3R 27535884 27535939 28 138 4.5 7.0 5.8 4.1 203 chr3R 27535736 intergenic CR44289 - chr3R 27535838 3` UTR CR44289 - chr3R 27535939 3` UTR CR44289 - chr3R_28_27535001 chr3R_27535001 RAL-382 3374 chr3R 27570219 27570297 chr3R 27570354 27570371 33 126 5.0 10.0 7.5 3.9 152 chr3R 27570219 intron wdb - chr3R 27570295 intron wdb - chr3R 27570371 intron wdb - chr3R_33_27570001 chr3R_27570001 RAL-382 3375 chr3R 27574061 27574130 chr3R 27574510 27574579 19 446 8.5 8.5 8.5 2.0 518 chr3R 27574061 intron wdb - chr3R 27574320 intron wdb - chr3R 27574579 intron wdb - chr3R_19_27570001 chr3R_27570001 RAL-382 3376 chr3R 27685739 27685795 chr3R 27685843 27685878 31 122 7.5 6.0 6.8 4.0 139 chr3R 27685739 3` UTR CG31055 - chr3R 27685808 3` UTR CG31055 - chr3R 27685878 3` UTR CG31055 - chr3R_31_27685001 chr3R_27685001 RAL-382 3377 chr3R 27706727 27706735 chr3R 27706854 27706862 5 127 22.5 13.5 18.0 0.3 135 chr3R 27706727 5` UTR CG12428 - chr3R 27706794 intergenic CG12428 -,CG12877 + chr3R 27706862 intergenic CG12428 -,CG12877 + chr3R_5_27705001 chr3R_27705001 RAL-382 3378 chr3R 27706737 27706804 chr3R 27706853 27706915 22 119 14.5 13.5 14.0 1.5 178 chr3R 27706737 5` UTR CG12428 - chr3R 27706826 intergenic CG12428 -,CG12877 + chr3R 27706915 intergenic CG12428 -,CG12877 + chr3R_22_27705001 chr3R_27705001 RAL-382 3379 chr3R 27721431 27721458 chr3R 27721559 27721586 13 128 13.5 9.5 11.5 1.0 155 chr3R 27721431 intergenic not near genes chr3R 27721508 intergenic not near genes chr3R 27721586 intergenic not near genes chr3R_13_27720001 chr3R_27720001 RAL-382 3380 chr3R 27721465 27721506 chr3R 27721557 27721634 15 123 6.5 10.0 8.2 1.6 169 chr3R 27721465 intergenic not near genes chr3R 27721550 intergenic not near genes chr3R 27721634 intergenic not near genes chr3R_15_27720001 chr3R_27720001 RAL-382 3381 chr3R 27725533 27725581 chr3R 27731025 27731073 I-element 18 5492 15.0 9.5 12.2 1.4 5540 chr3R 27725533 intergenic not near genes chr3R 27728303 intergenic not near genes chr3R 27731073 intergenic not near genes chr3R_18_27725001 chr3R_27725001 RAL-382 3382 chr3R 27791616 27791635 chr3R 27794813 27794833 Rt1c 5 3198 15.0 18.5 16.8 0.3 3217 chr3R 27791616 intron CG34353 - chr3R 27793224 intron CG34353 - chr3R 27794833 intron CG34353 - chr3R_5_27790001 chr3R_27790001 RAL-382 3383 chr3R 27791638 27791648 chr3R 27794795 27794846 Rt1c 5 3187 13.0 14.5 13.8 0.3 3208 chr3R 27791638 intron CG34353 - chr3R 27793242 intron CG34353 - chr3R 27794846 intron CG34353 - chr3R_5_27790001 chr3R_27790001 RAL-382 3384 chr3R 27799886 27799964 chr3R 27800018 27800096 29 132 8.5 3.5 6.0 4.1 210 chr3R 27799886 intron CG34353 - chr3R 27799991 intron CG34353 - chr3R 27800096 intron CG34353 - chr3R_29_27795001 chr3R_27795001 RAL-382 3385 chr3R 27856718 27856783 chr3R 27858251 27858316 hopper2 26 1530 9.0 10.5 9.8 2.4 1598 chr3R 27856718 intron CG34353 - chr3R 27857517 intron CG34353 - chr3R 27858316 intron CG34353 - chr3R_26_27855001 chr3R_27855001 RAL-382 3386 chr3R 27862914 27862926 chr3R 27868269 27868281 Transpac 5 5355 19.0 11.0 15.0 0.3 5367 chr3R 27862914 intron CG34353 - chr3R 27865598 intron CG34353 - chr3R 27868281 intron CG34353 - chr3R_5_27865001 chr3R_27865001 RAL-382 3387 chr3R 27862931 27862978 chr3R 27868261 27868322 Transpac 18 5347 11.5 10.0 10.8 1.5 5391 chr3R 27862931 intron CG34353 - chr3R 27865626 intron CG34353 - chr3R 27868322 intron CG34353 - chr3R_18_27865001 chr3R_27865001 RAL-382 3388 chr3R 27875660 27875724 chr3R 27882764 27882829 297 26 7102 7.0 12.0 9.5 2.5 7169 chr3R 27875660 intron CG34353 - chr3R 27879244 intron CG34353 - chr3R 27882829 intron CG34353 - chr3R_26_27875001 chr3R_27875001 RAL-382 3389 chr3R 27996731 27996761 chr3R 27996866 27996923 13 149 9.0 7.0 8.0 1.4 192 chr3R 27996731 intergenic not near genes chr3R 27996827 intergenic not near genes chr3R 27996923 intergenic not near genes chr3R_13_27995001 chr3R_27995001 RAL-382 3390 chr3R 28035439 28035506 chr3R 28035566 28035633 26 122 5.5 6.0 5.8 3.8 194 chr3R 28035439 intron CG34362 + chr3R 28035536 intron CG34362 + chr3R 28035633 intron CG34362 + chr3R_26_28035001 chr3R_28035001 RAL-382 3391 chr3R 28068486 28068524 chr3R 28073951 28073975 I-element 8 5482 0.0 8.5 4.2 1.5 5489 chr3R 28068486 intron CG34362 + chr3R 28071230 intron CG34362 + chr3R 28073975 intron CG34362 + chr3R_8_28070001 chr3R_28070001 RAL-382 3392 chr3R 28103282 28103346 chr3R 28103425 28103488 17 139 4.0 4.5 4.2 3.3 206 chr3R 28103282 intergenic not near genes chr3R 28103385 intergenic not near genes chr3R 28103488 intergenic not near genes chr3R_17_28100001 chr3R_28100001 RAL-382 3393 chr3R 28126689 28126725 chr3R 28126825 28126831 11 128 9.0 5.5 7.2 1.3 142 chr3R 28126689 intergenic not near genes chr3R 28126760 intergenic not near genes chr3R 28126831 intergenic not near genes chr3R_11_28125001 chr3R_28125001 RAL-382 3394 chr3R 28135559 28135623 chr3R 28137627 28137691 25 2068 57.5 56.5 57.0 0.4 2132 chr3R 28135559 intergenic not near genes chr3R 28136625 intergenic not near genes chr3R 28137691 intergenic not near genes chr3R_25_28135001 chr3R_28135001 RAL-382 3395 chr3R 28173624 28173692 chr3R 28181104 28181172 mdg1 31 7480 9.0 8.0 8.5 3.3 7548 chr3R 28173624 intron CG34354 + chr3R 28177398 intron CG34354 + chr3R 28181172 intron CG34354 + chr3R_31_28175001 chr3R_28175001 RAL-382 3396 chr3R 28204158 28204171 chr3R 28204612 28204625 9 454 8.5 8.0 8.2 1.0 467 chr3R 28204158 intron CG34354 + chr3R 28204392 intron CG34354 + chr3R 28204625 intron CG34354 + chr3R_9_28200001 chr3R_28200001 RAL-382 3397 chr3R 28204172 28204231 chr3R 28204606 28204680 10 444 1.0 8.0 4.5 1.8 508 chr3R 28204172 intron CG34354 + chr3R 28204426 intron CG34354 + chr3R 28204680 intron CG34354 + chr3R_10_28200001 chr3R_28200001 RAL-382 3398 chr3R 28253307 28253318 chr3R 28255860 28255878 jockey 4 2558 16.5 12.5 14.5 0.3 2571 chr3R 28253307 intergenic not near genes chr3R 28254592 intergenic not near genes chr3R 28255878 intergenic not near genes chr3R_4_28250001 chr3R_28250001 RAL-382 3399 chr3R 28253322 28253356 chr3R 28255856 28255915 jockey 13 2544 6.5 11.5 9.0 1.3 2593 chr3R 28253322 intergenic not near genes chr3R 28254618 intergenic not near genes chr3R 28255915 intergenic not near genes chr3R_13_28250001 chr3R_28250001 RAL-382 3400 chr3R 28302054 28302115 chr3R 28302546 28302607 jockey 28 492 12.5 8.5 10.5 2.4 553 chr3R 28302054 intergenic not near genes chr3R 28302330 intergenic not near genes chr3R 28302607 intergenic not near genes chr3R_28_28300001 chr3R_28300001 RAL-382 3401 chr3R 28393656 28393725 chr3R 28393806 28393873 38 148 8.5 13.0 10.8 3.2 217 chr3R 28393656 intergenic not near genes chr3R 28393764 intergenic not near genes chr3R 28393873 intergenic not near genes chr3R_38_28390001 chr3R_28390001 RAL-382 3402 chr3R 28416078 28416127 chr3R 28416245 28416294 12 163 12.0 10.0 11.0 1.0 216 chr3R 28416078 intergenic not near genes chr3R 28416186 intergenic not near genes chr3R 28416294 intergenic not near genes chr3R_12_28415001 chr3R_28415001 RAL-382 3403 chr3R 28478943 28479163 chr3R 28479089 28479296 34 139 0.0 0.0 0.0 34.0 353 chr3R 28478943 intergenic not near genes chr3R 28479120 intergenic not near genes chr3R 28479296 intergenic not near genes chr3R_34_28475001 chr3R_28475001 RAL-382 3404 chr3R 28480284 28480331 chr3R 28480415 28480462 16 131 7.0 7.0 7.0 2.0 178 chr3R 28480284 intergenic not near genes chr3R 28480373 intergenic not near genes chr3R 28480462 intergenic not near genes chr3R_16_28480001 chr3R_28480001 RAL-382 3405 chr3R 28616428 28616503 chr3R 28616572 28616647 44 143 9.5 7.5 8.5 4.6 219 chr3R 28616428 intron CG10011 - chr3R 28616538 intron CG10011 - chr3R 28616647 intron CG10011 - chr3R_44_28615001 chr3R_28615001 RAL-382 3406 chr3R 28716848 28716857 chr3R 28717056 28717066 7 209 19.5 8.5 14.0 0.5 218 chr3R 28716848 intron htt + chr3R 28716957 intron htt + chr3R 28717066 intron htt + chr3R_7_28715001 chr3R_28715001 RAL-382 3407 chr3R 28716861 28716918 chr3R 28717052 28717127 25 202 7.0 7.5 7.2 3.0 266 chr3R 28716861 intron htt + chr3R 28716994 intron htt + chr3R 28717127 intron htt + chr3R_25_28715001 chr3R_28715001 RAL-382 3408 chr3R 28758240 28758253 chr3R 28763907 28763920 roo 9 5667 21.5 0.0 10.8 0.8 5680 chr3R 28758240 intergenic aqrs - chr3R 28761080 intergenic not near genes chr3R 28763920 intergenic not near genes chr3R_9_28760001 chr3R_28760001 RAL-382 3409 chr3R 28758272 28758318 chr3R 28771329 28771375 Stalker4 28 13057 5.5 8.0 6.8 3.6 13103 chr3R 28758272 intergenic aqrs - chr3R 28764824 intergenic not near genes chr3R 28771375 intergenic not near genes chr3R_28_28760001 chr3R_28760001 RAL-382 3410 chr3R 28763909 28763918 chr3R 28771402 28771411 Stalker4 6 7493 0.0 22.0 11.0 0.5 7502 chr3R 28763909 intergenic not near genes chr3R 28767660 intergenic not near genes chr3R 28771411 intergenic not near genes chr3R_6_28765001 chr3R_28765001 RAL-382 3411 chr3R 28792830 28792859 chr3R 28797975 28797995 jockey 5 5141 7.5 5.5 6.5 0.7 5165 chr3R 28792830 intergenic not near genes chr3R 28795412 intergenic not near genes chr3R 28797995 intergenic not near genes chr3R_5_28795001 chr3R_28795001 RAL-382 3412 chr3R 28792860 28792898 chr3R 28797969 28798043 jockey 4 5132 2.5 5.0 3.8 0.8 5183 chr3R 28792860 intergenic not near genes chr3R 28795452 intergenic not near genes chr3R 28798043 intergenic not near genes chr3R_4_28795001 chr3R_28795001 RAL-382 3413 chr3R 28823060 28823092 chr3R 28823187 28823219 19 126 12.0 9.0 10.5 1.7 159 chr3R 28823060 exon CG1647 + chr3R 28823140 exon CG1647 + chr3R 28823219 exon CG1647 + chr3R_19_28820001 chr3R_28820001 RAL-382 3414 chr3R 28823098 28823108 chr3R 28823186 28823232 5 114 10.0 9.0 9.5 0.5 134 chr3R 28823098 exon CG1647 + chr3R 28823165 exon CG1647 + chr3R 28823232 exon CG1647 + chr3R_5_28820001 chr3R_28820001 RAL-382 3415 chr3R 28823110 28823136 chr3R 28823182 28823214 14 109 8.0 8.5 8.2 1.5 104 chr3R 28823110 exon CG1647 + chr3R 28823162 exon CG1647 + chr3R 28823214 exon CG1647 + chr3R_14_28820001 chr3R_28820001 RAL-382 3416 chr3R 21907534 21907536 chr3R 28831799 28831801 48 6924266 33.5 25.0 29.2 1.6 6924267 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831801 intron WASp - chr3R_48_25365001 chr3R_25365001 RAL-382 3417 chr3R 21907534 21907535 chr3R 28831802 28831803 49 6924267 33.0 26.5 29.8 1.6 6924269 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831803 intron WASp - chr3R_49_25365001 chr3R_25365001 RAL-382 3418 chr3R 28922715 28922772 chr3R 28922841 28922898 23 125 12.5 0.0 6.2 3.2 183 chr3R 28922715 3` UTR Doa + chr3R 28922806 intergenic Doa +,CG11828 + chr3R 28922898 intergenic Doa +,CG11828 + chr3R_23_28920001 chr3R_28920001 RAL-382 3419 chr3R 28932759 28932815 chr3R 28933116 28933156 9 354 7.5 2.0 4.8 1.6 397 chr3R 28932759 intron CG14521 - chr3R 28932958 intron CG14521 - chr3R 28933156 intron CG14521 - chr3R_9_28930001 chr3R_28930001 RAL-382 3420 chr3R 28950203 28950249 chr3R 28950334 28950380 20 131 16.5 3.0 9.8 1.9 177 chr3R 28950203 intron CG14521 - chr3R 28950292 intron CG14521 - chr3R 28950380 intron CG14521 - chr3R_20_28950001 chr3R_28950001 RAL-382 3421 chr3R 29032699 29032775 chr3R 29032826 29032905 18 125 6.5 7.5 7.0 2.2 206 chr3R 29032699 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032802 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032905 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R_18_29030001 chr3R_29030001 RAL-382 3422 chr3R 29034018 29034093 chr3R 29034464 29034538 15 445 3.0 6.5 4.8 2.6 520 chr3R 29034018 5` UTR CR45044 + chr3R 29034278 intergenic CR45044 +,beta4GalNAcTB -,Cpsf100 + chr3R 29034538 intergenic Cpsf100 +,CR45044 + chr3R_15_29030001 chr3R_29030001 RAL-382 3423 chr3R 29046438 29046490 chr3R 29046569 29046576 8 125 12.0 0.5 6.2 1.1 138 chr3R 29046438 3` UTR Pkc98E + chr3R 29046507 3` UTR Pkc98E + chr3R 29046576 3` UTR Pkc98E + chr3R_8_29045001 chr3R_29045001 RAL-382 3424 chr3R 29070004 29070077 chr3R 29070135 29070208 38 131 8.0 13.0 10.5 3.3 204 chr3R 29070004 intron CG11873 + chr3R 29070106 intron CG11873 + chr3R 29070208 intron CG11873 + chr3R_38_29070001 chr3R_29070001 RAL-382 3425 chr3R 29079348 29079407 chr3R 29080770 29080837 NOF 15 1424 6.5 0.0 3.2 3.6 1489 chr3R 29079348 intron CG11873 + chr3R 29080092 intron CG11873 + chr3R 29080837 intron CG11873 + chr3R_15_29080001 chr3R_29080001 RAL-382 3426 chr3R 29081464 29081482 chr3R 29081602 29081620 6 138 5.0 10.0 7.5 0.7 156 chr3R 29081464 intron CG11873 + chr3R 29081542 intron CG11873 + chr3R 29081620 intron CG11873 + chr3R_6_29080001 chr3R_29080001 RAL-382 3427 chr3R 29090706 29090778 chr3R 29090873 29090945 37 165 5.5 10.0 7.8 4.2 239 chr3R 29090706 intron CG11873 + chr3R 29090826 intron CG11873 + chr3R 29090945 intron CG11873 + chr3R_37_29090001 chr3R_29090001 RAL-382 3428 chr3R 29091386 29091404 chr3R 29091520 29091542 6 137 13.5 10.0 11.8 0.5 156 chr3R 29091386 intron CG11873 + chr3R 29091464 intron CG11873 + chr3R 29091542 intron CG11873 + chr3R_6_29090001 chr3R_29090001 RAL-382 3429 chr3R 29091406 29091432 chr3R 29091519 29091534 6 120 7.0 9.5 8.2 0.7 128 chr3R 29091406 intron CG11873 + chr3R 29091470 intron CG11873 + chr3R 29091534 intron CG11873 + chr3R_6_29090001 chr3R_29090001 RAL-382 3430 chr3R 29213016 29213031 chr3R 29213149 29213164 12 132 21.5 8.0 14.8 0.8 148 chr3R 29213016 intergenic not near genes chr3R 29213090 intergenic not near genes chr3R 29213164 intergenic not near genes chr3R_12_29210001 chr3R_29210001 RAL-382 3431 chr3R 29213034 29213091 chr3R 29213142 29213224 25 129 8.0 6.5 7.2 3.0 190 chr3R 29213034 intergenic not near genes chr3R 29213129 intergenic not near genes chr3R 29213224 intergenic not near genes chr3R_25_29210001 chr3R_29210001 RAL-382 3432 chr3R 29237214 29237269 chr3R 29239270 29239340 18 2067 43.5 10.5 27.0 0.6 2126 chr3R 29237214 exon CG11951 - chr3R 29238277 intron CG11951 - chr3R 29239340 exon CG31427 - chr3R_18_29235001 chr3R_29235001 RAL-382 3433 chr3R 29237523 29237532 chr3R 29239466 29239475 5 1943 35.5 17.0 26.2 0.2 1952 chr3R 29237523 exon CG11951 - chr3R 29238499 intron CG11951 - chr3R 29239475 exon CG31427 - chr3R_5_29235001 chr3R_29235001 RAL-382 3434 chr3R 29239226 29239246 chr3R 29245520 29245537 4 6294 9.5 30.0 19.8 0.2 6311 chr3R 29239226 exon CG31427 - chr3R 29242382 exon CG31445 - chr3R 29245537 exon SP1029 - chr3R_4_29240001 chr3R_29240001 RAL-382 3435 chr3R 29237530 29237536 chr3R 29239388 29239394 4 1858 36.0 20.5 28.2 0.1 1864 chr3R 29237530 exon CG11951 - chr3R 29238462 intron CG11951 - chr3R 29239394 intron CG31427 - chr3R_4_29235001 chr3R_29235001 RAL-382 3436 chr3R 29277180 29277254 chr3R 29277796 29277870 22 612 0.0 5.5 2.8 5.8 690 chr3R 29277180 intergenic CR45568 - chr3R 29277525 intergenic CR45568 - chr3R 29277870 intergenic not near genes chr3R_22_29275001 chr3R_29275001 RAL-382 3437 chr3R 29319784 29319858 chr3R 29320153 29320211 jockey 23 367 8.0 13.0 10.5 2.0 427 chr3R 29319784 intergenic Cnx99A - chr3R 29319998 intergenic Cnx99A - chr3R 29320211 intergenic not near genes chr3R_23_29320001 chr3R_29320001 RAL-382 3438 chr3R 29322733 29322799 chr3R 29322868 29322932 10 133 10.0 2.5 6.2 1.4 199 chr3R 29322733 intergenic not near genes chr3R 29322832 intergenic not near genes chr3R 29322932 intergenic not near genes chr3R_10_29320001 chr3R_29320001 RAL-382 3439 chr3R 29355997 29356073 chr3R 29356127 29356204 21 131 0.0 8.5 4.2 4.0 207 chr3R 29355997 intergenic CR45547 - chr3R 29356100 intergenic CR45547 - chr3R 29356204 3` UTR CR45547 - chr3R_21_29355001 chr3R_29355001 RAL-382 3440 chr3R 29365338 29365409 chr3R 29365470 29365541 27 131 8.5 9.5 9.0 2.7 203 chr3R 29365338 intergenic not near genes chr3R 29365440 intergenic not near genes chr3R 29365541 intergenic not near genes chr3R_27_29365001 chr3R_29365001 RAL-382 3441 chr3R 29378518 29378537 chr3R 29378667 29378686 9 145 7.5 14.0 10.8 0.8 168 chr3R 29378518 intron Ptp99A + chr3R 29378602 intron Ptp99A + chr3R 29378686 intron Ptp99A + chr3R_9_29375001 chr3R_29375001 RAL-382 3442 chr3R 29406577 29406637 chr3R 29407907 29407938 jockey 11 1330 4.0 10.5 7.2 1.3 1361 chr3R 29406577 intron Ptp99A + chr3R 29407258 intron Ptp99A + chr3R 29407938 intron Ptp99A + chr3R_11_29405001 chr3R_29405001 RAL-382 3443 chr3R 29449314 29449344 chr3R 29449442 29449472 20 128 17.0 13.0 15.0 1.2 158 chr3R 29449314 intron Ptp99A + chr3R 29449393 intron Ptp99A + chr3R 29449472 intron Ptp99A + chr3R_20_29445001 chr3R_29445001 RAL-382 3444 chr3R 29449346 29449384 chr3R 29449441 29449512 22 125 9.0 12.5 10.8 1.9 166 chr3R 29449346 intron Ptp99A + chr3R 29449429 intron Ptp99A + chr3R 29449512 intron Ptp99A + chr3R_22_29445001 chr3R_29445001 RAL-382 3445 chr3R 29472267 29472283 chr3R 29472403 29472419 5 136 18.0 7.5 12.8 0.4 152 chr3R 29472267 intron Ptp99A + chr3R 29472343 intron Ptp99A + chr3R 29472419 intron Ptp99A + chr3R_5_29470001 chr3R_29470001 RAL-382 3446 chr3R 29472288 29472337 chr3R 29472400 29472447 13 122 6.0 6.5 6.2 1.8 159 chr3R 29472288 intron Ptp99A + chr3R 29472368 intron Ptp99A + chr3R 29472447 intron Ptp99A + chr3R_13_29470001 chr3R_29470001 RAL-382 3447 chr3R 29508831 29508842 chr3R 29509003 29509014 7 172 0.0 8.5 4.2 1.3 183 chr3R 29508831 intergenic not near genes chr3R 29508922 intergenic not near genes chr3R 29509014 intergenic not near genes chr3R_7_29505001 chr3R_29505001 RAL-382 3448 chr3R 29512887 29512953 chr3R 29513018 29513084 29 129 11.0 10.5 10.8 2.5 197 chr3R 29512887 intergenic not near genes chr3R 29512986 intergenic not near genes chr3R 29513084 intergenic not near genes chr3R_29_29510001 chr3R_29510001 RAL-382 3449 chr3R 29576723 29576766 chr3R 29576875 29576909 9 144 3.0 6.5 4.8 1.6 186 chr3R 29576723 intergenic not near genes chr3R 29576816 intergenic not near genes chr3R 29576909 intergenic not near genes chr3R_9_29575001 chr3R_29575001 RAL-382 3450 chr3R 29581505 29581556 chr3R 29581636 29581687 15 131 7.0 10.0 8.5 1.6 182 chr3R 29581505 intergenic not near genes chr3R 29581596 intergenic not near genes chr3R 29581687 intergenic not near genes chr3R_15_29580001 chr3R_29580001 RAL-382 3451 chr3R 29590326 29590403 chr3R 29590469 29590539 19 141 4.5 4.0 4.2 3.7 213 chr3R 29590326 exon CG31041 - chr3R 29590432 intron CG31041 - chr3R 29590539 exon CG31041 - chr3R_19_29590001 chr3R_29590001 RAL-382 3452 chr3R 29607991 29608012 chr3R 29608118 29608122 14 124 4.5 18.5 11.5 1.1 131 chr3R 29607991 intron alph + chr3R 29608056 intron alph + chr3R 29608122 intron alph + chr3R_14_29605001 chr3R_29605001 RAL-382 3453 chr3R 29609121 29609200 chr3R 29609260 29609272 23 134 7.5 2.5 5.0 3.8 151 chr3R 29609121 intron alph + chr3R 29609196 intron alph + chr3R 29609272 intron alph + chr3R_23_29605001 chr3R_29605001 RAL-382 3454 chr3R 29627235 29627305 chr3R 29627697 29627767 16 457 8.5 3.5 6.0 2.3 532 chr3R 29627235 intergenic not near genes chr3R 29627501 intergenic not near genes chr3R 29627767 intergenic not near genes chr3R_16_29625001 chr3R_29625001 RAL-382 3455 chr3R 29738219 29738293 chr3R 29739736 29739750 hobo 21 1513 10.0 8.0 9.0 2.1 1531 chr3R 29738219 intergenic CG1969 +,CG7598 + chr3R 29738984 intron CG1969 + chr3R 29739750 5` UTR CG1969 + chr3R_21_29735001 chr3R_29735001 RAL-382 3456 chr3R 29754916 29754990 chr3R 29755044 29755112 32 128 6.0 12.5 9.2 3.1 196 chr3R 29754916 intergenic CR44953 -,yata + chr3R 29755014 intergenic CR44953 -,yata + chr3R 29755112 intergenic CR44953 - chr3R_32_29755001 chr3R_29755001 RAL-382 3457 chr3R 29760316 29760383 chr3R 29761567 29761634 pogo 28 1249 11.5 0.0 5.8 4.1 1318 chr3R 29760316 intergenic not near genes chr3R 29760975 intergenic not near genes chr3R 29761634 intergenic not near genes chr3R_28_29760001 chr3R_29760001 RAL-382 3458 chr3R 29781419 29781479 chr3R 29781666 29781727 16 245 6.5 26.5 16.5 0.9 308 chr3R 29781419 intron kay + chr3R 29781573 intron kay + chr3R 29781727 intron kay + chr3R_16_29780001 chr3R_29780001 RAL-382 3459 chr3R 29781523 29781542 chr3R 29781682 29781742 10 169 8.0 29.0 18.5 0.5 219 chr3R 29781523 intron kay + chr3R 29781632 intron kay + chr3R 29781742 intron kay + chr3R_10_29780001 chr3R_29780001 RAL-382 3460 chr3R 29881977 29882045 chr3R 29891184 29891252 roo 28 9207 15.0 11.0 13.0 2.0 9275 chr3R 29881977 intron CG31038 + chr3R 29886614 intron CG31038 + chr3R 29891252 intron CG31038 + chr3R_28_29885001 chr3R_29885001 RAL-382 3461 chr3R 29948221 29948247 chr3R 29948347 29948373 13 126 22.0 11.5 16.8 0.7 152 chr3R 29948221 intergenic CG15523 + chr3R 29948297 intergenic CG15523 + chr3R 29948373 intergenic CG15523 + chr3R_13_29945001 chr3R_29945001 RAL-382 3462 chr3R 29950539 29950550 chr3R 29950666 29950677 5 126 12.0 12.0 12.0 0.4 138 chr3R 29950539 intergenic TkR99D - chr3R 29950608 intergenic TkR99D - chr3R 29950677 intergenic TkR99D - chr3R_5_29950001 chr3R_29950001 RAL-382 3463 chr3R 29950551 29950599 chr3R 29950657 29950691 20 115 4.0 10.5 7.2 2.4 140 chr3R 29950551 intergenic TkR99D - chr3R 29950621 intergenic TkR99D - chr3R 29950691 intergenic TkR99D - chr3R_20_29950001 chr3R_29950001 RAL-382 3464 chr3R 29963430 29963510 chr3R 29963578 29963586 19 143 3.5 0.0 1.8 6.8 156 chr3R 29963430 intron TkR99D - chr3R 29963508 intron TkR99D - chr3R 29963586 intron TkR99D - chr3R_19_29960001 chr3R_29960001 RAL-382 3465 chr3R 29966010 29966071 chr3R 29966140 29966188 15 124 7.0 12.5 9.8 1.4 178 chr3R 29966010 intron TkR99D - chr3R 29966099 intron TkR99D - chr3R 29966188 intron TkR99D - chr3R_15_29965001 chr3R_29965001 RAL-382 3466 chr3R 30013337 30013406 chr3R 30013485 30013554 33 145 6.0 5.5 5.8 4.9 217 chr3R 30013337 intron CG7920 - chr3R 30013446 intron CG7920 - chr3R 30013554 intron CG7920 - chr3R_33_30010001 chr3R_30010001 RAL-382 3467 chr3R 30025232 30025309 chr3R 30025358 30025435 13 126 4.0 9.5 6.8 1.7 203 chr3R 30025232 intron Axn + chr3R 30025334 intron Axn + chr3R 30025435 intron Axn + chr3R_13_30025001 chr3R_30025001 RAL-382 3468 chr3R 30030391 30030462 chr3R 30030516 30030537 29 124 7.5 8.0 7.8 3.3 146 chr3R 30030391 intron Axn + chr3R 30030464 intron Axn + chr3R 30030537 intron Axn + chr3R_29_30030001 chr3R_30030001 RAL-382 3469 chr3R 30032115 30032128 chr3R 30032244 30032257 5 129 19.5 6.0 12.8 0.4 142 chr3R 30032115 intron Axn + chr3R 30032186 intron Axn + chr3R 30032257 intron Axn + chr3R_5_30030001 chr3R_30030001 RAL-382 3470 chr3R 30050355 30050369 chr3R 30050485 30050499 6 130 2.5 20.0 11.2 0.5 144 chr3R 30050355 intron,intron CG15528 -,CR44046 + chr3R 30050427 intron,intron CG15528 -,CR44046 + chr3R 30050499 intron,intron CG15528 -,CR44046 + chr3R_6_30050001 chr3R_30050001 RAL-382 3471 chr3R 30065280 30065299 chr3R 30065443 30065462 5 163 21.5 9.0 15.2 0.3 182 chr3R 30065280 intron sima + chr3R 30065371 intron sima + chr3R 30065462 intron sima + chr3R_5_30065001 chr3R_30065001 RAL-382 3472 chr3R 30084813 30084878 chr3R 30086330 30086368 hobo 17 1514 10.0 11.0 10.5 1.5 1555 chr3R 30084813 intron sima + chr3R 30085590 intron sima + chr3R 30086368 intron sima + chr3R_17_30085001 chr3R_30085001 RAL-382 3473 chr3R 30097436 30097653 chr3R 30097567 30097842 63 154 2.0 2.0 2.0 21.0 406 chr3R 30097436 intron sima + chr3R 30097639 intron sima + chr3R 30097842 intron sima + chr3R_63_30095001 chr3R_30095001 RAL-382 3474 chr3R 30147804 30147867 chr3R 30147935 30148003 24 135 0.0 11.0 5.5 3.7 199 chr3R 30147804 intron AdoR - chr3R 30147904 intron AdoR - chr3R 30148003 intron AdoR - chr3R_24_30145001 chr3R_30145001 RAL-382 3475 chr3R 30170644 30170675 chr3R 30170770 30170800 17 125 7.0 5.5 6.2 2.4 156 chr3R 30170644 exon CG31028 - chr3R 30170722 intron CG31028 - chr3R 30170800 intron CG31028 - chr3R_17_30170001 chr3R_30170001 RAL-382 3476 chr3R 30193460 30193463 chr3R 30193595 30193598 4 135 5.0 13.5 9.2 0.4 138 chr3R 30193460 intergenic not near genes chr3R 30193529 intergenic not near genes chr3R 30193598 intergenic not near genes chr3R_4_30190001 chr3R_30190001 RAL-382 3477 chr3R 30203340 30203384 chr3R 30203469 30203513 16 128 3.5 10.5 7.0 2.0 173 chr3R 30203340 intergenic CG9743 - chr3R 30203426 intergenic CG9743 - chr3R 30203513 intergenic not near genes chr3R_16_30200001 chr3R_30200001 RAL-382 3478 chr3R 30210528 30210674 chr3R 30210674 30210804 11 134 2.5 0.0 1.2 5.0 276 chr3R 30210528 intergenic Anp +,CecA1 + chr3R 30210666 intergenic CecA1 +,Anp + chr3R 30210804 intergenic CecA1 +,Anp + chr3R_11_30210001 chr3R_30210001 RAL-382 3479 chr3R 30225703 30225712 chr3R 30225829 30225838 4 126 7.5 9.5 8.5 0.4 135 chr3R 30225703 intergenic not near genes chr3R 30225770 intergenic not near genes chr3R 30225838 intergenic not near genes chr3R_4_30225001 chr3R_30225001 RAL-382 3480 chr3R 30238719 30238789 chr3R 30239933 30240003 1360 45 1214 10.5 11.0 10.8 3.8 1284 chr3R 30238719 intergenic not near genes chr3R 30239361 intergenic not near genes chr3R 30240003 intergenic not near genes chr3R_45_30235001 chr3R_30235001 RAL-382 3481 chr3R 30259948 30260022 chr3R 30260117 30260140 23 159 10.0 6.0 8.0 2.6 192 chr3R 30259948 intergenic not near genes chr3R 30260044 intergenic not near genes chr3R 30260140 intergenic not near genes chr3R_23_30260001 chr3R_30260001 RAL-382 3482 chr3R 30271017 30271097 chr3R 30271152 30271157 4 105 5.0 5.0 5.0 0.7 140 chr3R 30271017 intergenic not near genes chr3R 30271087 intergenic not near genes chr3R 30271157 intergenic not near genes chr3R_4_30270001 chr3R_30270001 RAL-382 3483 chr3R 30299710 30299773 chr3R 30299973 30300035 22 262 7.0 7.0 7.0 2.8 325 chr3R 30299710 intron hdc + chr3R 30299872 intron hdc + chr3R 30300035 intron hdc + chr3R_22_30295001 chr3R_30295001 RAL-382 3484 chr3R 30300162 30300217 chr3R 30300292 30300347 19 127 10.5 12.5 11.5 1.5 185 chr3R 30300162 intron hdc + chr3R 30300254 intron hdc + chr3R 30300347 intron hdc + chr3R_19_30300001 chr3R_30300001 RAL-382 3485 chr3R 30315584 30315617 chr3R 30315717 30315724 9 127 18.5 15.5 17.0 0.5 140 chr3R 30315584 intron hdc + chr3R 30315654 intron hdc + chr3R 30315724 intron hdc + chr3R_9_30315001 chr3R_30315001 RAL-382 3486 chr3R 30317275 30317355 chr3R 30324917 30324997 roo 22 7639 4.0 1.0 2.5 6.3 7722 chr3R 30317275 intron hdc + chr3R 30321136 intron hdc + chr3R 30324997 intron hdc + chr3R_22_30320001 chr3R_30320001 RAL-382 3487 chr3R 30347000 30347032 chr3R 30347124 30347167 9 132 3.5 13.5 8.5 0.9 167 chr3R 30347000 intron hdc + chr3R 30347084 intron hdc + chr3R 30347167 intron hdc + chr3R_9_30345001 chr3R_30345001 RAL-382 3488 chr3R 30375497 30375526 chr3R 30383172 30383201 412 17 7675 22.5 9.0 15.8 1.0 7704 chr3R 30375497 intergenic not near genes chr3R 30379349 intergenic not near genes chr3R 30383201 intergenic not near genes chr3R_17_30375001 chr3R_30375001 RAL-382 3489 chr3R 30375527 30375563 chr3R 30383171 30383238 412 19 7670 12.5 9.0 10.8 1.6 7711 chr3R 30375527 intergenic not near genes chr3R 30379382 intergenic not near genes chr3R 30383238 intergenic not near genes chr3R_19_30375001 chr3R_30375001 RAL-382 3490 chr3R 30396176 30396235 chr3R 30404492 30404551 roo 32 8316 8.0 16.5 12.2 2.4 8375 chr3R 30396176 intergenic not near genes chr3R 30400364 intergenic not near genes chr3R 30404551 5` UTR CR45570 + chr3R_32_30400001 chr3R_30400001 RAL-382 3491 chr3R 30466652 30466728 chr3R 30466782 30466858 28 121 6.5 8.0 7.2 3.4 206 chr3R 30466652 intron PH4alphaEFB + chr3R 30466755 intron PH4alphaEFB + chr3R 30466858 intron PH4alphaEFB + chr3R_28_30465001 chr3R_30465001 RAL-382 3492 chr3R 30480452 30480473 chr3R 30482957 30482991 jockey 11 2514 13.5 1.0 7.2 1.3 2539 chr3R 30480452 intron PH4alphaEFB + chr3R 30481722 intron PH4alphaEFB + chr3R 30482991 intron PH4alphaEFB + chr3R_11_30480001 chr3R_30480001 RAL-382 3493 chr3R 30480474 30480504 chr3R 30482942 30483022 jockey 12 2507 5.5 1.0 3.2 2.9 2548 chr3R 30480474 intron PH4alphaEFB + chr3R 30481748 intron PH4alphaEFB + chr3R 30483022 intron PH4alphaEFB + chr3R_12_30480001 chr3R_30480001 RAL-382 3494 chr3R 30488075 30488092 chr3R 30488204 30488219 7 129 14.5 0.5 7.5 0.8 144 chr3R 30488075 intergenic Jon99Fii - chr3R 30488147 intergenic Jon99Fii - chr3R 30488219 intergenic Jon99Fii - chr3R_7_30485001 chr3R_30485001 RAL-382 3495 chr3R 30519157 30519231 chr3R 30519283 30519319 7 105 5.5 4.5 5.0 1.2 162 chr3R 30519157 intron jdp - chr3R 30519238 intron jdp - chr3R 30519319 intron jdp - chr3R_7_30515001 chr3R_30515001 RAL-382 3496 chr3R 30522866 30522875 chr3R 30523002 30523011 7 136 21.0 6.0 13.5 0.5 145 chr3R 30522866 intron jdp - chr3R 30522938 intron jdp - chr3R 30523011 intron jdp - chr3R_7_30520001 chr3R_30520001 RAL-382 3497 chr3R 30522880 30522933 chr3R 30523000 30523057 17 129 8.0 4.5 6.2 2.4 177 chr3R 30522880 intron jdp - chr3R 30522968 intron jdp - chr3R 30523057 intron jdp - chr3R_17_30520001 chr3R_30520001 RAL-382 3498 chr3R 30522934 30522938 chr3R 30522997 30523074 4 118 8.0 4.5 6.2 0.6 140 chr3R 30522934 intron jdp - chr3R 30523004 intron jdp - chr3R 30523074 intron jdp - chr3R_4_30520001 chr3R_30520001 RAL-382 3499 chr3R 30548970 30548982 chr3R 30549112 30549124 8 142 18.0 7.5 12.8 0.6 154 chr3R 30548970 intron tmod + chr3R 30549047 intron tmod + chr3R 30549124 intron tmod + chr3R_8_30545001 chr3R_30545001 RAL-382 3500 chr3R 30548983 30549039 chr3R 30549109 30549181 33 140 8.0 7.5 7.8 3.7 198 chr3R 30548983 intron tmod + chr3R 30549082 intron tmod + chr3R 30549181 intron tmod + chr3R_33_30545001 chr3R_30545001 RAL-382 3501 chr3R 30558101 30558153 chr3R 30558232 30558283 16 131 6.5 10.0 8.2 1.7 182 chr3R 30558101 intron,intron tmod +,CG34155 - chr3R 30558192 intron,intron tmod +,CG34155 - chr3R 30558283 intron,intron tmod +,CG34155 - chr3R_16_30555001 chr3R_30555001 RAL-382 3502 chr3R 30571664 30571711 chr3R 30571794 30571841 19 129 8.0 7.5 7.8 2.2 177 chr3R 30571664 intron tmod + chr3R 30571752 intron tmod + chr3R 30571841 exon tmod + chr3R_19_30570001 chr3R_30570001 RAL-382 3503 chr3R 30578103 30578167 chr3R 30578230 30578271 16 117 7.5 10.0 8.8 1.6 168 chr3R 30578103 intron tmod + chr3R 30578187 3` UTR tmod + chr3R 30578271 3` UTR tmod + chr3R_16_30575001 chr3R_30575001 RAL-382 3504 chr3R 30620781 30620792 chr3R 30620911 30620913 7 128 18.0 9.5 13.8 0.5 132 chr3R 30620781 intron CG44954 - chr3R 30620847 intron CG44954 - chr3R 30620913 intron CG44954 - chr3R_7_30620001 chr3R_30620001 RAL-382 3505 chr3R 30620793 30620856 chr3R 30620904 30620942 23 124 9.5 10.5 10.0 2.1 149 chr3R 30620793 intron CG44954 - chr3R 30620868 intron CG44954 - chr3R 30620942 intron CG44954 - chr3R_23_30620001 chr3R_30620001 RAL-382 3506 chr3R 30679474 30679543 chr3R 30686993 30687062 blood 21 7517 7.5 8.5 8.0 2.3 7588 chr3R 30679474 intergenic not near genes chr3R 30683268 intergenic not near genes chr3R 30687062 intergenic not near genes chr3R_21_30680001 chr3R_30680001 RAL-382 3507 chr3R 30689751 30689792 chr3R 30689877 30689918 22 126 3.0 11.0 7.0 2.8 167 chr3R 30689751 intergenic not near genes chr3R 30689834 intergenic not near genes chr3R 30689918 intergenic not near genes chr3R_22_30685001 chr3R_30685001 RAL-382 3508 chr3R 30741945 30742017 chr3R 30742079 30742150 19 132 2.5 4.5 3.5 4.2 205 chr3R 30741945 intergenic not near genes chr3R 30742048 intergenic not near genes chr3R 30742150 intergenic not near genes chr3R_19_30740001 chr3R_30740001 RAL-382 3509 chr3R 30747511 30747517 chr3R 30747637 30747643 6 126 14.5 7.0 10.8 0.5 132 chr3R 30747511 intergenic CR43238 - chr3R 30747577 intergenic CR43238 - chr3R 30747643 intergenic CR43238 - chr3R_6_30745001 chr3R_30745001 RAL-382 3510 chr3R 30747519 30747533 chr3R 30747628 30747657 5 122 13.0 6.5 9.8 0.5 138 chr3R 30747519 intergenic CR43238 - chr3R 30747588 intergenic CR43238 - chr3R 30747657 intergenic CR43238 - chr3R_5_30745001 chr3R_30745001 RAL-382 3511 chr3R 30747536 30747563 chr3R 30747624 30747656 5 100 8.5 7.0 7.8 0.6 120 chr3R 30747536 intergenic CR43238 - chr3R 30747596 intergenic CR43238 - chr3R 30747656 intergenic CR43238 - chr3R_5_30745001 chr3R_30745001 RAL-382 3512 chr3R 30761304 30761310 chr3R 30761436 30761442 4 132 12.5 10.0 11.2 0.3 138 chr3R 30761304 intergenic not near genes chr3R 30761373 intergenic not near genes chr3R 30761442 intergenic not near genes chr3R_4_30760001 chr3R_30760001 RAL-382 3513 chr3R 30761311 30761333 chr3R 30761443 30761465 9 132 9.0 12.0 10.5 0.8 154 chr3R 30761311 intergenic not near genes chr3R 30761388 intergenic not near genes chr3R 30761465 intergenic not near genes chr3R_9_30760001 chr3R_30760001 RAL-382 3514 chr3R 30818769 30818830 chr3R 30820384 30820415 1360 38 1613 15.5 8.0 11.8 3.0 1646 chr3R 30818769 intron cindr + chr3R 30819592 intron cindr + chr3R 30820415 intron cindr + chr3R_38_30815001 chr3R_30815001 RAL-382 3515 chr3R 30821356 30821419 chr3R 30821494 30821549 13 134 6.5 5.5 6.0 1.9 193 chr3R 30821356 intron cindr + chr3R 30821452 intron cindr + chr3R 30821549 intron cindr + chr3R_13_30820001 chr3R_30820001 RAL-382 3516 chr3R 30823386 30823415 chr3R 30823531 30823561 11 146 6.5 15.5 11.0 0.9 175 chr3R 30823386 intron cindr + chr3R 30823474 intron cindr + chr3R 30823561 intron cindr + chr3R_11_30820001 chr3R_30820001 RAL-382 3517 chr3R 30859356 30859427 chr3R 30859484 30859555 34 128 9.0 8.0 8.5 3.6 199 chr3R 30859356 intergenic not near genes chr3R 30859456 intergenic not near genes chr3R 30859555 intergenic not near genes chr3R_34_30855001 chr3R_30855001 RAL-382 3518 chr3R 30933109 30933180 chr3R 30933241 30933312 10 123 6.5 4.5 5.5 1.5 203 chr3R 30933109 intergenic not near genes chr3R 30933210 intergenic not near genes chr3R 30933312 intergenic not near genes chr3R_10_30930001 chr3R_30930001 RAL-382 3519 chr3R 30934714 30934782 chr3R 30934844 30934917 25 134 7.0 8.5 7.8 2.8 203 chr3R 30934714 intergenic not near genes chr3R 30934816 intergenic not near genes chr3R 30934917 intergenic CG15549 - chr3R_25_30930001 chr3R_30930001 RAL-382 3520 chr3R 30946385 30946415 chr3R 30946519 30946539 12 133 14.0 16.0 15.0 0.8 154 chr3R 30946385 intergenic not near genes chr3R 30946462 intergenic not near genes chr3R 30946539 intergenic not near genes chr3R_12_30945001 chr3R_30945001 RAL-382 3521 chr3R 30980801 30980819 chr3R 30980927 30980945 10 126 11.5 11.0 11.2 0.8 144 chr3R 30980801 intron 5-HT7 - chr3R 30980873 intron 5-HT7 - chr3R 30980945 intron 5-HT7 - chr3R_10_30980001 chr3R_30980001 RAL-382 3522 chr3R 31042015 31042126 chr3R 31042124 31042262 22 159 0.0 1.0 0.5 14.7 247 chr3R 31042015 exon CanA1 + chr3R 31042138 intron CanA1 + chr3R 31042262 intron CanA1 + chr3R_22_31040001 chr3R_31040001 RAL-382 3523 chr3R 31055468 31055519 chr3R 31055623 31055674 15 152 9.0 13.0 11.0 1.2 206 chr3R 31055468 3` UTR dco - chr3R 31055571 3` UTR dco - chr3R 31055674 3` UTR dco - chr3R_15_31055001 chr3R_31055001 RAL-382 3524 chr3R 31074190 31074261 chr3R 31081838 31081916 springer 22 7652 7.0 2.0 4.5 4.0 7726 chr3R 31074190 intron Sox100B + chr3R 31078053 intron Sox100B + chr3R 31081916 exon Sox100B + chr3R_22_31075001 chr3R_31075001 RAL-382 3525 chr3R 31084858 31084934 chr3R 31084984 31085060 29 126 7.0 10.5 8.8 3.0 202 chr3R 31084858 intergenic not near genes chr3R 31084959 intergenic not near genes chr3R 31085060 intergenic not near genes chr3R_29_31080001 chr3R_31080001 RAL-382 3526 chr3R 31109629 31109656 chr3R 31109755 31109757 5 121 13.5 2.5 8.0 0.6 128 chr3R 31109629 intergenic CG11318 - chr3R 31109693 intergenic not near genes chr3R 31109757 intergenic not near genes chr3R_5_31105001 chr3R_31105001 RAL-382 3527 chr3R 31175714 31175791 chr3R 31175853 31175930 33 134 8.5 5.5 7.0 4.1 216 chr3R 31175714 intron Gycbeta100B + chr3R 31175822 intron Gycbeta100B + chr3R 31175930 intron Gycbeta100B + chr3R_33_31175001 chr3R_31175001 RAL-382 3528 chr3R 31279323 31279398 chr3R 31285564 31285626 diver 27 6233 4.5 4.5 4.5 4.9 6303 chr3R 31279323 intergenic not near genes chr3R 31282474 intergenic not near genes chr3R 31285626 intergenic not near genes chr3R_27_31280001 chr3R_31280001 RAL-382 3529 chr3R 31295315 31295373 chr3R 31295451 31295474 16 122 6.0 5.5 5.8 2.4 159 chr3R 31295315 intergenic not near genes chr3R 31295394 intergenic not near genes chr3R 31295474 intergenic not near genes chr3R_16_31295001 chr3R_31295001 RAL-382 3530 chr3R 31330397 31330407 chr3R 31335649 31335659 copia 5 5252 7.5 7.0 7.2 0.6 5262 chr3R 31330397 intron CG34347 + chr3R 31333028 intron CG34347 + chr3R 31335659 intron CG34347 + chr3R_5_31330001 chr3R_31330001 RAL-382 3531 chr3R 31346669 31346698 chr3R 31346798 31346827 11 125 15.0 9.0 12.0 0.8 158 chr3R 31346669 intron CG34347 + chr3R 31346748 intron CG34347 + chr3R 31346827 intron CG34347 + chr3R_11_31345001 chr3R_31345001 RAL-382 3532 chr3R 31346700 31346742 chr3R 31346796 31346871 16 123 8.0 9.0 8.5 1.7 171 chr3R 31346700 intron CG34347 + chr3R 31346786 intron CG34347 + chr3R 31346871 intron CG34347 + chr3R_16_31345001 chr3R_31345001 RAL-382 3533 chr3R 31370659 31370665 chr3R 31370804 31370810 5 145 25.5 7.0 16.2 0.3 151 chr3R 31370659 3` UTR CG34347 + chr3R 31370734 3` UTR CG34347 + chr3R 31370810 3` UTR CG34347 + chr3R_5_31370001 chr3R_31370001 RAL-382 3534 chr3R 31370667 31370734 chr3R 31370802 31370845 20 140 7.5 6.5 7.0 2.5 178 chr3R 31370667 3` UTR CG34347 + chr3R 31370756 3` UTR CG34347 + chr3R 31370845 3` UTR CG34347 + chr3R_20_31370001 chr3R_31370001 RAL-382 3535 chr3R 31412664 31412737 chr3R 31412806 31412880 23 142 3.0 7.5 5.2 3.7 216 chr3R 31412664 intron Gprk2 + chr3R 31412772 intron Gprk2 + chr3R 31412880 intron Gprk2 + chr3R_23_31410001 chr3R_31410001 RAL-382 3536 chr3R 31413048 31413100 chr3R 31418298 31418319 copia 7 5236 3.5 0.0 1.8 2.5 5271 chr3R 31413048 intron Gprk2 + chr3R 31415684 intron Gprk2 + chr3R 31418319 intron Gprk2 + chr3R_7_31415001 chr3R_31415001 RAL-382 3537 chr3R 31426842 31426870 chr3R 31426984 31427012 19 141 13.0 11.5 12.2 1.4 170 chr3R 31426842 intron Gprk2 + chr3R 31426927 intron Gprk2 + chr3R 31427012 intron Gprk2 + chr3R_19_31425001 chr3R_31425001 RAL-382 3538 chr3R 31426872 31426902 chr3R 31426976 31427044 15 136 9.0 10.0 9.5 1.4 172 chr3R 31426872 intron Gprk2 + chr3R 31426958 intron Gprk2 + chr3R 31427044 intron Gprk2 + chr3R_15_31425001 chr3R_31425001 RAL-382 3539 chr3R 31435317 31435391 chr3R 31435519 31435593 35 201 5.0 11.0 8.0 3.9 276 chr3R 31435317 intron Gprk2 + chr3R 31435455 intron Gprk2 + chr3R 31435593 intron Gprk2 + chr3R_35_31435001 chr3R_31435001 RAL-382 3540 chr3R 31442222 31442296 chr3R 31442357 31442431 31 134 8.5 7.0 7.8 3.5 209 chr3R 31442222 intron Gprk2 + chr3R 31442326 intron Gprk2 + chr3R 31442431 intron Gprk2 + chr3R_31_31440001 chr3R_31440001 RAL-382 3541 chr3R 31446035 31446101 chr3R 31446175 31446244 19 140 7.5 6.0 6.8 2.4 209 chr3R 31446035 intron Gprk2 + chr3R 31446140 intron Gprk2 + chr3R 31446244 intron Gprk2 + chr3R_19_31445001 chr3R_31445001 RAL-382 3542 chr3R 31448556 31448620 chr3R 31448682 31448746 13 116 6.0 9.5 7.8 1.5 190 chr3R 31448556 intron Gprk2 + chr3R 31448651 intron Gprk2 + chr3R 31448746 intron Gprk2 + chr3R_13_31445001 chr3R_31445001 RAL-382 3543 chr3R 31539295 31539357 chr3R 31539429 31539446 23 127 9.0 9.5 9.2 2.3 151 chr3R 31539295 intergenic not near genes chr3R 31539370 intergenic not near genes chr3R 31539446 intergenic not near genes chr3R_23_31535001 chr3R_31535001 RAL-382 3544 chr3R 31539816 31539879 chr3R 31539951 31540014 24 132 7.0 5.5 6.2 3.3 198 chr3R 31539816 intergenic not near genes chr3R 31539915 intergenic not near genes chr3R 31540014 intergenic not near genes chr3R_24_31535001 chr3R_31535001 RAL-382 3545 chr3R 31548859 31548890 chr3R 31548993 31549025 6 132 9.5 15.5 12.5 0.4 166 chr3R 31548859 intron nyo + chr3R 31548942 intron nyo + chr3R 31549025 intron nyo + chr3R_6_31545001 chr3R_31545001 RAL-382 3546 chr3R 31637817 31637825 chr3R 31637955 31637963 4 138 22.0 5.0 13.5 0.3 146 chr3R 31637817 intron kek6 + chr3R 31637890 intron kek6 + chr3R 31637963 intron kek6 + chr3R_4_31635001 chr3R_31635001 RAL-382 3547 chr3R 31637827 31637896 chr3R 31637949 31637974 15 127 7.5 5.0 6.2 2.1 147 chr3R 31637827 intron kek6 + chr3R 31637900 intron kek6 + chr3R 31637974 intron kek6 + chr3R_15_31635001 chr3R_31635001 RAL-382 3548 chr3R 31656185 31656251 chr3R 31656316 31656382 30 130 9.0 9.0 9.0 3.0 197 chr3R 31656185 intron kek6 + chr3R 31656284 intron kek6 + chr3R 31656382 intron kek6 + chr3R_30_31655001 chr3R_31655001 RAL-382 3549 chr3R 31691480 31691532 chr3R 31696296 31696359 Doc 22 4824 4.0 9.5 6.8 2.8 4879 chr3R 31691480 intergenic not near genes chr3R 31693920 intergenic not near genes chr3R 31696359 intergenic not near genes chr3R_22_31690001 chr3R_31690001 RAL-382 3550 chr3R 31820246 31820267 chr3R 31820769 31820790 6 522 23.0 11.5 17.2 0.3 544 chr3R 31820246 intron RhoGAP100F + chr3R 31820518 intron RhoGAP100F + chr3R 31820790 intron RhoGAP100F + chr3R_6_31820001 chr3R_31820001 RAL-382 3551 chr3R 31820269 31820312 chr3R 31820767 31820805 15 508 11.0 11.5 11.2 1.2 536 chr3R 31820269 intron RhoGAP100F + chr3R 31820537 intron RhoGAP100F + chr3R 31820805 intron RhoGAP100F + chr3R_15_31820001 chr3R_31820001 RAL-382 3552 chr3R 31879176 31879247 chr3R 31879310 31879381 35 133 5.5 12.5 9.0 3.5 205 chr3R 31879176 intron heph - chr3R 31879278 intron heph - chr3R 31879381 intron heph - chr3R_35_31875001 chr3R_31875001 RAL-382 3553 chr3R 31930857 31930933 chr3R 31931006 31931062 25 144 4.5 7.5 6.0 3.6 205 chr3R 31930857 intron heph - chr3R 31930960 intron heph - chr3R 31931062 intron heph - chr3R_25_31930001 chr3R_31930001 RAL-382 3554 chr3R 31961295 31961365 chr3R 31961428 31961498 20 128 7.5 7.0 7.2 2.4 203 chr3R 31961295 intron heph - chr3R 31961396 intron heph - chr3R 31961498 intron heph - chr3R_20_31960001 chr3R_31960001 RAL-382 3555 chr3R 31962048 31962052 chr3R 31962391 31962408 6 352 11.0 0.0 5.5 0.9 360 chr3R 31962048 intron heph - chr3R 31962228 intron heph - chr3R 31962408 intron heph - chr3R_6_31960001 chr3R_31960001 RAL-382 3556 chr3R 31962055 31962079 chr3R 31962386 31962420 11 350 9.0 0.0 4.5 2.0 365 chr3R 31962055 intron heph - chr3R 31962238 intron heph - chr3R 31962420 intron heph - chr3R_11_31960001 chr3R_31960001 RAL-382 3557 chr3R 31976541 31976572 chr3R 31976861 31976903 16 330 0.0 14.0 7.0 2.0 362 chr3R 31976541 intron heph - chr3R 31976722 intron heph - chr3R 31976903 intron heph - chr3R_16_31975001 chr3R_31975001 RAL-382 3558 chr3R 31997951 31997959 chr3R 32005471 32005479 blood 8 7520 21.0 9.0 15.0 0.5 7528 chr3R 31997951 intron heph - chr3R 32001715 intron heph - chr3R 32005479 intron heph - chr3R_8_32000001 chr3R_32000001 RAL-382 3559 chr3R 31997961 31998015 chr3R 32005469 32005535 blood 26 7515 9.0 8.5 8.8 2.7 7574 chr3R 31997961 intron heph - chr3R 32001748 intron heph - chr3R 32005535 intron heph - chr3R_26_32000001 chr3R_32000001 RAL-382 3560 chr4 76451 76510 chr4 81944 82003 I-element 14 5491 8.0 9.5 8.8 1.4 5552 chr4 76451 intron pan + chr4 79227 intron pan + chr4 82003 intron pan + chr4_14_75001 chr4_75001 RAL-382 3561 chr4 280756 280793 chr4 281436 281473 19 680 16.0 11.5 13.8 1.3 717 chr4 280756 intron Syt7 - chr4 281114 intron Syt7 - chr4 281473 intron Syt7 - chr4_19_280001 chr4_280001 RAL-382 3562 chr4 311022 311074 chr4 311147 311209 24 134 12.5 4.5 8.5 2.5 187 chr4 311022 3` UTR Zip102B - chr4 311116 3` UTR Zip102B - chr4 311209 3` UTR Zip102B - chr4_24_310001 chr4_310001 RAL-382 3563 chr4 314466 314484 chr4 314594 314612 6 128 14.0 8.0 11.0 0.5 146 chr4 314466 intergenic Zip102B -,CG32850 + chr4 314539 intergenic CG32850 +,Zip102B - chr4 314612 intergenic CG32850 + chr4_6_310001 chr4_310001 RAL-382 3564 chr4 314493 314528 chr4 314591 314656 17 126 8.0 8.0 8.0 1.9 163 chr4 314493 intergenic Zip102B -,CG32850 + chr4 314574 intergenic CG32850 +,Zip102B - chr4 314656 intergenic CG32850 + chr4_17_310001 chr4_310001 RAL-382 3565 chr4 319950 320015 chr4 328176 328241 Stalker2 31 8226 7.0 10.5 8.8 3.2 8291 chr4 319950 3` UTR CG32850 + chr4 324096 intron CG32850 + chr4 328241 3` UTR,3` UTR CG32850 +,PMCA - chr4_31_320001 chr4_320001 RAL-382 3566 chr4 368653 368691 chr4 368835 368868 17 182 17.0 10.5 13.8 1.1 215 chr4 368653 intron Hcf + chr4 368760 intron Hcf + chr4 368868 intron Hcf + chr4_17_365001 chr4_365001 RAL-382 3567 chr4 409173 409226 chr4 409306 409342 31 131 10.0 0.5 5.2 5.0 169 chr4 409173 intergenic not near genes chr4 409258 intergenic not near genes chr4 409342 intergenic not near genes chr4_31_405001 chr4_405001 RAL-382 3568 chr4 671572 671581 chr4 680205 680214 Tirant 6 8633 23.0 15.0 19.0 0.3 8642 chr4 671572 intron CG11360 + chr4 675893 intron CG11360 + chr4 680214 intron CG11360 + chr4_6_675001 chr4_675001 RAL-382 3569 chr4 671584 671623 chr4 680196 680255 Tirant 18 8630 11.5 14.0 12.8 1.3 8671 chr4 671584 intron CG11360 + chr4 675920 intron CG11360 + chr4 680255 intron CG11360 + chr4_18_675001 chr4_675001 RAL-382 3570 chr4 706627 706653 chr4 706810 706849 6 186 53.0 54.5 53.8 0.1 222 chr4 706627 intron ey + chr4 706738 intron ey + chr4 706849 intron ey + chr4_6_705001 chr4_705001 RAL-382 3571 chr4 847055 847114 chr4 847301 847360 30 245 12.0 7.5 9.8 2.8 305 chr4 847055 intergenic not near genes chr4 847208 intergenic not near genes chr4 847360 intergenic not near genes chr4_30_845001 chr4_845001 RAL-382 3572 chr4 959584 959648 chr4 959813 959876 28 226 8.5 8.0 8.2 3.0 292 chr4 959584 intergenic CR44030 +,CR45201 - chr4 959730 5` UTR CR44030 + chr4 959876 5` UTR CR44030 + chr4_28_955001 chr4_955001 RAL-382 3573 chr4 972454 972519 chr4 972586 972651 37 132 14.5 11.5 13.0 2.6 197 chr4 972454 intron fuss - chr4 972552 intron fuss - chr4 972651 intron fuss - chr4_37_970001 chr4_970001 RAL-382 3574 chr4 1171905 1171912 chr4 1172220 1172227 6 315 19.0 8.0 13.5 0.4 322 chr4 1171905 intergenic not near genes chr4 1172066 intergenic pho - chr4 1172227 intergenic pho - chr4_6_1170001 chr4_1170001 RAL-382 3575 chr4 1171916 1171925 chr4 1172215 1172240 5 312 17.0 7.5 12.2 0.4 324 chr4 1171916 intergenic not near genes chr4 1172078 intergenic pho - chr4 1172240 intergenic pho - chr4_5_1170001 chr4_1170001 RAL-382 3576 chr4 1171927 1171969 chr4 1172242 1172261 8 312 9.5 15.0 12.2 0.6 334 chr4 1171927 intergenic not near genes chr4 1172094 intergenic pho - chr4 1172261 intergenic pho - chr4_8_1170001 chr4_1170001 RAL-382 3577 chrX 295813 295830 chrX 303483 303498 412 5 7669 19.5 9.0 14.2 0.3 7685 chrX 295813 intron CG3777 + chrX 299656 intron CG3777 + chrX 303498 intron CG3777 + chrX_5_295001 chrX_295001 RAL-382 3578 chrX 295833 295880 chrX 303477 303550 412 22 7662 12.0 8.0 10.0 2.0 7717 chrX 295833 intron CG3777 + chrX 299692 intron CG3777 + chrX 303550 intron CG3777 + chrX_22_295001 chrX_295001 RAL-382 3579 chrX 428388 428444 chrX 434604 434679 3S18 16 6233 6.5 6.0 6.2 2.2 6291 chrX 428388 intron CG32816 - chrX 431534 intron CG32816 - chrX 434679 intron CG32816 - chrX_16_430001 chrX_430001 RAL-382 3580 chrX 450316 450391 chrX 450442 450519 22 127 2.5 6.5 4.5 4.0 203 chrX 450316 intron CG32816 - chrX 450418 intron CG32816 - chrX 450519 intron CG32816 - chrX_22_450001 chrX_450001 RAL-382 3581 chrX 536302 536359 chrX 536961 537021 15 655 6.0 7.5 6.8 1.9 719 chrX 536302 intron Appl + chrX 536662 intron Appl + chrX 537021 intron Appl + chrX_15_535001 chrX_535001 RAL-382 3582 chrX 547592 547661 chrX 547886 547955 22 292 10.0 7.0 8.5 2.3 363 chrX 547592 intron Appl + chrX 547774 intron Appl + chrX 547955 intron Appl + chrX_22_545001 chrX_545001 RAL-382 3583 chrX 551383 551447 chrX 558995 559059 412 14 7610 5.0 7.0 6.0 2.0 7676 chrX 551383 intron Appl + chrX 555221 intron Appl + chrX 559059 intron Appl + chrX_14_555001 chrX_555001 RAL-382 3584 chrX 617927 618005 chrX 618057 618135 41 128 8.0 6.0 7.0 5.1 208 chrX 617927 intron CG13366 - chrX 618031 intron CG13366 - chrX 618135 intron CG13366 - chrX_41_615001 chrX_615001 RAL-382 3585 chrX 667613 667679 chrX 667747 667813 21 134 6.5 0.0 3.2 5.0 200 chrX 667613 intergenic not near genes chrX 667713 intergenic not near genes chrX 667813 intergenic not near genes chrX_21_665001 chrX_665001 RAL-382 3586 chrX 670202 670286 chrX 670343 670390 17 122 0.0 5.0 2.5 4.9 188 chrX 670202 intergenic not near genes chrX 670296 intergenic not near genes chrX 670390 intergenic not near genes chrX_17_670001 chrX_670001 RAL-382 3587 chrX 680801 680866 chrX 680934 680999 19 132 8.5 8.5 8.5 2.0 198 chrX 680801 intergenic not near genes chrX 680900 intergenic not near genes chrX 680999 intergenic not near genes chrX_19_680001 chrX_680001 RAL-382 3588 chrX 706739 706821 chrX 707161 707220 17 415 0.0 7.0 3.5 3.8 481 chrX 706739 intron sdk + chrX 706980 intron sdk + chrX 707220 intron sdk + chrX_17_705001 chrX_705001 RAL-382 3589 chrX 718300 718358 chrX 718410 718481 21 128 6.0 5.5 5.8 3.1 181 chrX 718300 intron sdk + chrX 718390 intron sdk + chrX 718481 intron sdk + chrX_21_715001 chrX_715001 RAL-382 3590 chrX 778084 778160 chrX 778224 778290 20 136 3.5 0.0 1.8 7.1 206 chrX 778084 intron fz3 + chrX 778187 intron fz3 + chrX 778290 intron fz3 + chrX_20_775001 chrX_775001 RAL-382 3591 chrX 806754 806813 chrX 806900 806959 20 142 2.0 7.0 4.5 3.6 205 chrX 806754 intron Sec22 + chrX 806856 intron Sec22 + chrX 806959 intron Sec22 + chrX_20_805001 chrX_805001 RAL-382 3592 chrX 812235 812259 chrX 817914 817938 297 12 5678 16.5 13.0 14.8 0.8 5703 chrX 812235 intron CG43867 - chrX 815086 intron CG43867 - chrX 817938 intron CG43867 - chrX_12_815001 chrX_815001 RAL-382 3593 chrX 812267 812294 chrX 817899 817973 297 12 5669 8.5 9.0 8.8 1.2 5706 chrX 812267 intron CG43867 - chrX 815120 intron CG43867 - chrX 817973 intron CG43867 - chrX_12_815001 chrX_815001 RAL-382 3594 chrX 827560 827606 chrX 835402 835468 roo 11 7845 9.0 0.0 4.5 2.0 7908 chrX 827560 intron CG43867 - chrX 831514 intron CG43867 - chrX 835468 intron CG43867 - chrX_11_830001 chrX_830001 RAL-382 3595 chrX 827608 827630 chrX 835401 835492 roo 9 7854 5.0 0.0 2.5 2.6 7884 chrX 827608 intron CG43867 - chrX 831550 intron CG43867 - chrX 835492 intron CG43867 - chrX_9_830001 chrX_830001 RAL-382 3596 chrX 882195 882256 chrX 882332 882393 20 137 9.0 7.5 8.2 2.2 198 chrX 882195 intron CG43867 - chrX 882294 intron CG43867 - chrX 882393 intron CG43867 - chrX_20_880001 chrX_880001 RAL-382 3597 chrX 894618 894653 chrX 894745 894746 5 112 11.5 5.0 8.2 0.5 128 chrX 894618 intron,exon CG43867 -,CG11663 + chrX 894682 intron,exon CG43867 -,CG11663 + chrX 894746 intron,exon CG43867 -,CG11663 + chrX_5_890001 chrX_890001 RAL-382 3598 chrX 906665 906720 chrX 908501 908559 S-element 19 1836 9.5 7.5 8.5 2.0 1894 chrX 906665 intron CG43867 - chrX 907612 intron CG43867 - chrX 908559 intron CG43867 - chrX_19_905001 chrX_905001 RAL-382 3599 chrX 990173 990239 chrX 990304 990370 23 128 3.5 9.5 6.5 3.1 197 chrX 990173 intergenic CG18823 + chrX 990272 intergenic CG18823 + chrX 990370 intergenic CG18823 + chrX_23_990001 chrX_990001 RAL-382 3600 chrX 1033309 1033324 chrX 1040992 1041001 412 10 7682 10.5 6.0 8.2 1.1 7692 chrX 1033309 intron su(w[a]) + chrX 1037155 intron su(w[a]) + chrX 1041001 intron su(w[a]) + chrX_10_1035001 chrX_1035001 RAL-382 3601 chrX 1053117 1053120 chrX 16983076 16983077 9 15929958 22.5 19.5 21.0 0.4 15929960 chrX 1053117 intron CR44779 + chrX 9018097 intron,intron rdgA +,CR43836 - chrX 16983077 intron CG45002 - chrX_9_9015001 chrX_9015001 RAL-382 3602 chrX 1055338 1055410 chrX 1055949 1056021 16 605 4.0 6.0 5.0 2.7 683 chrX 1055338 intron CR44779 + chrX 1055680 intron CR44779 + chrX 1056021 intron CR44779 + chrX_16_1055001 chrX_1055001 RAL-382 3603 chrX 1063722 1063746 chrX 1072565 1072589 roo 12 8843 14.0 12.5 13.2 0.8 8867 chrX 1063722 intron CR44779 + chrX 1068156 intron CR44779 + chrX 1072589 intron CR44779 + chrX_12_1065001 chrX_1065001 RAL-382 3604 chrX 1253693 1253756 chrX 1253824 1253888 17 130 6.5 9.5 8.0 1.9 195 chrX 1253693 intron Atf3 - chrX 1253790 intron Atf3 - chrX 1253888 intron Atf3 - chrX_17_1250001 chrX_1250001 RAL-382 3605 chrX 1357740 1357802 chrX 1367960 1368007 Doc 34 10219 11.0 10.0 10.5 3.0 10267 chrX 1357740 intergenic png - chrX 1362874 intergenic not near genes chrX 1368007 intergenic not near genes chrX_34_1360001 chrX_1360001 RAL-382 3606 chrX 1410765 1410823 chrX 1410891 1410912 7 111 9.5 12.0 10.8 0.6 147 chrX 1410765 intron futsch + chrX 1410838 intron futsch + chrX 1410912 intron futsch + chrX_7_1410001 chrX_1410001 RAL-382 3607 chrX 1467306 1467369 chrX 1467466 1467510 17 160 9.0 7.0 8.0 1.9 204 chrX 1467306 intron CG14777 + chrX 1467408 intron CG14777 + chrX 1467510 intron,5` UTR CG14777 +,CG14778 + chrX_17_1465001 chrX_1465001 RAL-382 3608 chrX 1517998 1518070 chrX 1523448 1523467 jockey 31 5446 6.0 16.5 11.2 2.5 5469 chrX 1517998 intergenic inc + chrX 1520732 intergenic not near genes chrX 1523467 intergenic not near genes chrX_31_1520001 chrX_1520001 RAL-382 3609 chrX 1551688 1551748 chrX 1551802 1551807 13 113 4.0 6.5 5.2 2.1 119 chrX 1551688 intergenic not near genes chrX 1551748 intergenic not near genes chrX 1551807 intergenic Mur2B - chrX_13_1550001 chrX_1550001 RAL-382 3610 chrX 1930492 1930564 chrX 1938113 1938185 opus 30 7620 8.0 9.5 8.8 3.1 7693 chrX 1930492 3` UTR CG11596 + chrX 1934338 intergenic not near genes chrX 1938185 3` UTR CG3857 - chrX_30_1930001 chrX_1930001 RAL-382 3611 chrX 1954867 1954917 chrX 1962831 1962847 Stalker2 13 7962 3.0 3.5 3.2 3.1 7980 chrX 1954867 intron Hr4 + chrX 1958857 intron Hr4 + chrX 1962847 intron Hr4 + chrX_13_1955001 chrX_1955001 RAL-382 3612 chrX 2023914 2023986 chrX 2024087 2024132 24 169 42.5 49.5 46.0 0.5 218 chrX 2023914 3` UTR,3` UTR east +,Actn - chrX 2024023 3` UTR,3` UTR east +,Actn - chrX 2024132 3` UTR,3` UTR east +,Actn - chrX_24_2020001 chrX_2020001 RAL-382 3613 chrX 2020874 2020906 chrX 2025584 2025610 7 4693 38.5 19.5 29.0 0.2 4736 chrX 2020874 exon east + chrX 2023242 3` UTR east + chrX 2025610 exon Actn - chrX_7_2020001 chrX_2020001 RAL-382 3614 chrX 2390155 2390212 chrX 2390307 2390349 20 151 7.0 1.0 4.0 4.0 194 chrX 2390155 intergenic not near genes chrX 2390252 intergenic not near genes chrX 2390349 intergenic not near genes chrX_20_2390001 chrX_2390001 RAL-382 3615 chrX 2399795 2399871 chrX 2408198 2408253 roo 14 8388 6.5 1.0 3.8 2.9 8458 chrX 2399795 intergenic not near genes chrX 2404024 intergenic not near genes chrX 2408253 intergenic not near genes chrX_14_2400001 chrX_2400001 RAL-382 3616 chrX 2429600 2429668 chrX 2429731 2429799 13 131 0.0 3.5 1.8 4.6 199 chrX 2429600 intergenic not near genes chrX 2429700 intergenic not near genes chrX 2429799 intergenic not near genes chrX_13_2425001 chrX_2425001 RAL-382 3617 chrX 2482730 2482739 chrX 2482852 2482867 5 127 10.5 8.0 9.2 0.5 137 chrX 2482730 intron trol - chrX 2482798 intron trol - chrX 2482867 intron trol - chrX_5_2480001 chrX_2480001 RAL-382 3618 chrX 2506466 2506534 chrX 2506596 2506668 16 131 0.0 5.5 2.8 4.2 202 chrX 2506466 intron trol - chrX 2506567 intron trol - chrX 2506668 intron trol - chrX_16_2505001 chrX_2505001 RAL-382 3619 chrX 2578770 2578837 chrX 2578912 2578979 29 140 2.0 8.5 5.2 4.7 209 chrX 2578770 intergenic Pdfr +,Vha36-3 - chrX 2578874 intergenic Vha36-3 -,Pdfr + chrX 2578979 intergenic Vha36-3 -,Pdfr + chrX_29_2575001 chrX_2575001 RAL-382 3620 chrX 2610340 2610412 chrX 2617507 2617579 HMS-Beagle 14 7165 5.5 10.5 8.0 1.6 7239 chrX 2610340 intergenic CG8636 - chrX 2613960 intergenic not near genes chrX 2617579 intergenic Tsp3A - chrX_14_2610001 chrX_2610001 RAL-382 3621 chrX 2664344 2664387 chrX 2665540 2665583 1360 22 1195 18.0 12.0 15.0 1.4 1239 chrX 2664344 intron sgg + chrX 2664964 intron sgg + chrX 2665583 intron sgg + chrX_22_2660001 chrX_2660001 RAL-382 3622 chrX 2664390 2664408 chrX 2665539 2665581 1360 14 1189 12.0 11.5 11.8 1.1 1191 chrX 2664390 intron sgg + chrX 2664986 intron sgg + chrX 2665581 intron sgg + chrX_14_2660001 chrX_2660001 RAL-382 3623 chrX 2677700 2677770 chrX 2677840 2677910 16 140 8.5 11.0 9.8 1.5 210 chrX 2677700 3` UTR sgg + chrX 2677805 3` UTR sgg + chrX 2677910 intergenic sgg + chrX_16_2675001 chrX_2675001 RAL-382 3624 chrX 2803459 2803504 chrX 2803647 2803679 20 190 3.5 0.0 1.8 7.1 220 chrX 2803459 intron kirre + chrX 2803569 intron kirre + chrX 2803679 intron kirre + chrX_20_2800001 chrX_2800001 RAL-382 3625 chrX 2808884 2808915 chrX 2809014 2809033 9 127 16.0 9.0 12.5 0.7 149 chrX 2808884 intron kirre + chrX 2808958 intron kirre + chrX 2809033 intron kirre + chrX_9_2805001 chrX_2805001 RAL-382 3626 chrX 2844858 2844925 chrX 2852318 2852385 mdg1 9 7460 5.5 7.5 6.5 1.2 7527 chrX 2844858 intron kirre + chrX 2848622 intron kirre + chrX 2852385 intron kirre + chrX_9_2845001 chrX_2845001 RAL-382 3627 chrX 2870610 2870678 chrX 2870746 2870814 33 131 8.5 6.0 7.2 4.0 204 chrX 2870610 intron kirre + chrX 2870712 intron kirre + chrX 2870814 intron kirre + chrX_33_2870001 chrX_2870001 RAL-382 3628 chrX 2888080 2888084 chrX 2888207 2888212 4 128 10.5 5.5 8.0 0.4 132 chrX 2888080 intron kirre + chrX 2888146 intron kirre + chrX 2888212 intron kirre + chrX_4_2885001 chrX_2885001 RAL-382 3629 chrX 2888086 2888140 chrX 2888202 2888268 14 127 4.5 4.5 4.5 2.5 182 chrX 2888086 intron kirre + chrX 2888177 intron kirre + chrX 2888268 intron kirre + chrX_14_2885001 chrX_2885001 RAL-382 3630 chrX 2971998 2972038 chrX 2972188 2972228 11 186 7.5 8.5 8.0 1.2 230 chrX 2971998 intron,intron kirre +,rst - chrX 2972113 intron,intron kirre +,rst - chrX 2972228 intron,intron kirre +,rst - chrX_11_2970001 chrX_2970001 RAL-382 3631 chrX 3005769 3005774 chrX 3005898 3005903 4 129 10.0 8.0 9.0 0.4 134 chrX 3005769 intron kirre + chrX 3005836 intron kirre + chrX 3005903 intron kirre + chrX_4_3005001 chrX_3005001 RAL-382 3632 chrX 3005776 3005836 chrX 3005890 3005943 20 125 2.5 7.5 5.0 3.3 167 chrX 3005776 intron kirre + chrX 3005860 intron kirre + chrX 3005943 intron kirre + chrX_20_3005001 chrX_3005001 RAL-382 3633 chrX 3057981 3058043 chrX 3058272 3058334 pogo 24 290 7.0 7.5 7.2 2.9 353 chrX 3057981 intron kirre + chrX 3058158 intron kirre + chrX 3058334 intron kirre + chrX_24_3055001 chrX_3055001 RAL-382 3634 chrX 3075600 3075655 chrX 3080956 3081011 Transpac 15 5350 9.0 6.0 7.5 1.8 5411 chrX 3075600 intron kirre + chrX 3078306 intron kirre + chrX 3081011 intron kirre + chrX_15_3075001 chrX_3075001 RAL-382 3635 chrX 3107713 3107733 chrX 3107852 3107872 5 139 1.0 6.0 3.5 1.1 159 chrX 3107713 intron kirre + chrX 3107792 intron kirre + chrX 3107872 intron kirre + chrX_5_3105001 chrX_3105001 RAL-382 3636 chrX 3107734 3107752 chrX 3107848 3107879 11 129 1.0 5.0 3.0 2.8 145 chrX 3107734 intron kirre + chrX 3107806 intron kirre + chrX 3107879 intron kirre + chrX_11_3105001 chrX_3105001 RAL-382 3637 chrX 3107753 3107779 chrX 3107840 3107918 6 129 1.0 5.0 3.0 1.5 165 chrX 3107753 intron kirre + chrX 3107836 intron kirre + chrX 3107918 intron kirre + chrX_6_3105001 chrX_3105001 RAL-382 3638 chrX 3118204 3118211 chrX 3118569 3118588 6 391 0.5 8.5 4.5 1.1 384 chrX 3118204 intron kirre + chrX 3118396 intron kirre + chrX 3118588 intron kirre + chrX_6_3115001 chrX_3115001 RAL-382 3639 chrX 3203418 3203485 chrX 3203667 3203734 18 249 4.0 7.5 5.8 2.6 316 chrX 3203418 intron dnc + chrX 3203576 intron dnc + chrX 3203734 intron dnc + chrX_18_3200001 chrX_3200001 RAL-382 3640 chrX 3206442 3206496 chrX 3206571 3206625 6 129 3.0 10.5 6.8 0.8 183 chrX 3206442 intron dnc + chrX 3206534 intron dnc + chrX 3206625 intron dnc + chrX_6_3205001 chrX_3205001 RAL-382 3641 chrX 3218490 3218529 chrX 3227679 3227728 roo 10 9198 4.5 11.0 7.8 1.1 9238 chrX 3218490 intron dnc + chrX 3223109 intron dnc + chrX 3227728 intron dnc + chrX_10_3220001 chrX_3220001 RAL-382 3642 chrX 3243613 3243648 chrX 3243737 3243788 12 138 10.5 13.0 11.8 0.9 175 chrX 3243613 intron dnc + chrX 3243700 intron dnc + chrX 3243788 intron dnc + chrX_12_3240001 chrX_3240001 RAL-382 3643 chrX 3271649 3271717 chrX 3271768 3271798 22 119 6.0 8.0 7.0 2.8 149 chrX 3271649 intron dnc + chrX 3271724 intron dnc + chrX 3271798 intron dnc + chrX_22_3270001 chrX_3270001 RAL-382 3644 chrX 3275480 3275555 chrX 3275617 3275692 17 136 5.5 6.0 5.8 2.5 212 chrX 3275480 intron dnc + chrX 3275586 intron dnc + chrX 3275692 intron dnc + chrX_17_3275001 chrX_3275001 RAL-382 3645 chrX 3306298 3306370 chrX 3306430 3306502 15 132 3.0 0.5 1.8 5.4 204 chrX 3306298 intron dnc + chrX 3306400 intron dnc + chrX 3306502 intron dnc + chrX_15_3305001 chrX_3305001 RAL-382 3646 chrX 3309348 3309423 chrX 3309567 3309642 24 219 7.0 9.0 8.0 2.7 294 chrX 3309348 intron dnc + chrX 3309495 intron dnc + chrX 3309642 intron dnc + chrX_24_3305001 chrX_3305001 RAL-382 3647 chrX 3352721 3352747 chrX 3352855 3352886 11 138 10.0 15.5 12.8 0.8 165 chrX 3352721 intergenic not near genes chrX 3352804 intergenic not near genes chrX 3352886 intergenic not near genes chrX_11_3350001 chrX_3350001 RAL-382 3648 chrX 3364417 3364439 chrX 3364534 3364571 8 128 0.0 10.0 5.0 1.3 154 chrX 3364417 intergenic not near genes chrX 3364494 intergenic not near genes chrX 3364571 intergenic not near genes chrX_8_3360001 chrX_3360001 RAL-382 3649 chrX 3398096 3398371 chrX 3398227 3398498 27 129 8.0 15.0 11.5 2.2 402 chrX 3398096 intron,intron CR44999 +,CG12535 - chrX 3398297 intron,intron CR44999 +,CG12535 - chrX 3398498 intron,intron CR44999 +,CG12535 - chrX_27_3395001 chrX_3395001 RAL-382 3650 chrX 3408944 3409015 chrX 3409071 3409142 13 127 1.5 7.0 4.2 2.5 198 chrX 3408944 intron,intron CR44999 +,CG12535 - chrX 3409043 intron,intron CR44999 +,CG12535 - chrX 3409142 intron,intron CR44999 +,CG12535 - chrX_13_3405001 chrX_3405001 RAL-382 3651 chrX 3414297 3414353 chrX 3414471 3414530 17 174 5.5 0.0 2.8 4.5 233 chrX 3414297 intron,intron CR44999 +,CG12535 - chrX 3414414 intron,intron CR44999 +,CG12535 - chrX 3414530 intron,intron CR44999 +,CG12535 - chrX_17_3410001 chrX_3410001 RAL-382 3652 chrX 3414980 3415041 chrX 3421215 3421275 3S18 19 6233 5.5 8.5 7.0 2.4 6295 chrX 3414980 intron,intron CR44999 +,CG12535 - chrX 3418128 intron,intron CR44999 +,CG12535 - chrX 3421275 intron,intron CR44999 +,CG12535 - chrX_19_3415001 chrX_3415001 RAL-382 3653 chrX 3433392 3433424 chrX 3433521 3433554 5 127 9.0 12.5 10.8 0.4 162 chrX 3433392 intron,intron CR44999 +,CG12535 - chrX 3433473 intron,intron CR44999 +,CG12535 - chrX 3433554 intron,intron CR44999 +,CG12535 - chrX_5_3430001 chrX_3430001 RAL-382 3654 chrX 3493050 3493116 chrX 3502259 3502324 roo 16 9204 6.0 3.5 4.8 2.8 9274 chrX 3493050 intron,intron CR44999 +,Gas8 - chrX 3497687 intron,intron CR44999 +,Gas8 - chrX 3502324 intron,intron CR44999 +,Gas8 - chrX_16_3495001 chrX_3495001 RAL-382 3655 chrX 3535357 3535433 chrX 3535500 3535574 19 139 3.0 5.0 4.0 3.8 217 chrX 3535357 intron CG32791 - chrX 3535466 intron CG32791 - chrX 3535574 intron CG32791 - chrX_19_3535001 chrX_3535001 RAL-382 3656 chrX 3567271 3567291 chrX 3567406 3567426 9 135 0.0 11.0 5.5 1.4 155 chrX 3567271 intron,intron CG32791 -,ppk8 + chrX 3567348 intron,intron CG32791 -,ppk8 + chrX 3567426 intron,intron CG32791 -,ppk8 + chrX_9_3565001 chrX_3565001 RAL-382 3657 chrX 3597507 3597579 chrX 3619719 3619776 roo 12 22210 8.0 6.0 7.0 1.5 22269 chrX 3597507 intron AstA-R1 + chrX 3608642 intron AstA-R1 + chrX 3619776 intron AstA-R1 + chrX_12_3605001 chrX_3605001 RAL-382 3658 chrX 3630498 3630570 chrX 3630624 3630693 18 124 4.0 0.5 2.2 5.6 195 chrX 3630498 intron AstA-R1 + chrX 3630596 intron AstA-R1 + chrX 3630693 intron AstA-R1 + chrX_18_3630001 chrX_3630001 RAL-382 3659 chrX 3640305 3640312 chrX 3640460 3640467 5 155 3.5 17.0 10.2 0.4 162 chrX 3640305 intron AstA-R1 + chrX 3640386 intron AstA-R1 + chrX 3640467 intron AstA-R1 + chrX_5_3640001 chrX_3640001 RAL-382 3660 chrX 3711024 3711078 chrX 3711155 3711209 19 128 0.5 9.0 4.8 3.3 185 chrX 3711024 intron Rala - chrX 3711116 intron Rala - chrX 3711209 intron Rala - chrX_19_3710001 chrX_3710001 RAL-382 3661 chrX 3726724 3726776 chrX 3730171 3730183 NOF 7 3441 3.0 0.0 1.5 2.8 3459 chrX 3726724 intron tlk + chrX 3728454 intron tlk + chrX 3730183 intron tlk + chrX_7_3725001 chrX_3725001 RAL-382 3662 chrX 3891110 3891174 chrX 3891278 3891342 19 165 5.0 8.5 6.8 2.4 232 chrX 3891110 intergenic CG42541 - chrX 3891226 intergenic CG42541 - chrX 3891342 intergenic CG42541 - chrX_19_3890001 chrX_3890001 RAL-382 3663 chrX 3899580 3899622 chrX 3899707 3899707 11 121 10.5 13.5 12.0 0.8 127 chrX 3899580 intron CG42541 - chrX 3899644 intron CG42541 - chrX 3899707 intron CG42541 - chrX_11_3895001 chrX_3895001 RAL-382 3664 chrX 3920072 3920134 chrX 3920205 3920267 15 133 2.0 9.0 5.5 2.3 195 chrX 3920072 intron CG42541 - chrX 3920170 intron CG42541 - chrX 3920267 intron CG42541 - chrX_15_3920001 chrX_3920001 RAL-382 3665 chrX 3986836 3986889 chrX 3994505 3994572 412 28 7681 9.0 6.5 7.8 3.2 7736 chrX 3986836 intergenic not near genes chrX 3990704 intergenic not near genes chrX 3994572 intergenic not near genes chrX_28_3990001 chrX_3990001 RAL-382 3666 chrX 4029502 4029555 chrX 4029735 4029795 13 239 8.0 8.0 8.0 1.4 293 chrX 4029502 intergenic not near genes chrX 4029648 intergenic not near genes chrX 4029795 intergenic not near genes chrX_13_4025001 chrX_4025001 RAL-382 3667 chrX 4071770 4071816 chrX 4071909 4071931 17 137 9.5 8.0 8.8 1.7 161 chrX 4071770 intergenic not near genes chrX 4071850 intergenic not near genes chrX 4071931 intergenic not near genes chrX_17_4070001 chrX_4070001 RAL-382 3668 chrX 4101822 4101836 chrX 4101951 4101965 6 129 20.0 6.0 13.0 0.4 143 chrX 4101822 exon CG15375 + chrX 4101894 exon CG15375 + chrX 4101965 exon CG15375 + chrX_6_4100001 chrX_4100001 RAL-382 3669 chrX 4101845 4101898 chrX 4101949 4101992 8 120 5.5 5.5 5.5 1.2 147 chrX 4101845 exon CG15375 + chrX 4101918 exon CG15375 + chrX 4101992 exon CG15375 + chrX_8_4100001 chrX_4100001 RAL-382 3670 chrX 4152341 4152373 chrX 4152466 4152500 6 124 4.0 8.0 6.0 0.9 159 chrX 4152341 intron Fas2 - chrX 4152420 intron Fas2 - chrX 4152500 intron Fas2 - chrX_6_4150001 chrX_4150001 RAL-382 3671 chrX 4157857 4157916 chrX 4164960 4165013 297 19 7102 5.5 8.0 6.8 2.4 7156 chrX 4157857 intron Fas2 - chrX 4161435 intron Fas2 - chrX 4165013 intron Fas2 - chrX_19_4160001 chrX_4160001 RAL-382 3672 chrX 4209884 4209956 chrX 4210024 4210096 15 140 0.0 7.0 3.5 3.3 212 chrX 4209884 intergenic not near genes chrX 4209990 intergenic not near genes chrX 4210096 intergenic not near genes chrX_15_4205001 chrX_4205001 RAL-382 3673 chrX 4212666 4212689 chrX 4212799 4212822 8 133 2.5 8.5 5.5 1.2 156 chrX 4212666 intergenic CG43288 + chrX 4212744 intergenic CG43288 + chrX 4212822 intergenic CG43288 + chrX_8_4210001 chrX_4210001 RAL-382 3674 chrX 4324342 4324410 chrX 4324469 4324537 19 124 9.0 4.0 6.5 2.5 195 chrX 4324342 intron norpA + chrX 4324440 intron norpA + chrX 4324537 intron norpA + chrX_19_4320001 chrX_4320001 RAL-382 3675 chrX 4365389 4365467 chrX 4365589 4365668 7 201 6.0 4.5 5.2 1.1 279 chrX 4365389 3` UTR norpA + chrX 4365528 intergenic norpA +,mir-982 - chrX 4365668 intergenic mir-982 -,norpA + chrX_7_4365001 chrX_4365001 RAL-382 3676 chrX 4389378 4389380 chrX 12946233 12946235 6 8556855 0.5 31.5 16.0 0.4 8556857 chrX 4389378 intron CR32773 - chrX 8667806 intergenic not near genes chrX 12946235 3` UTR fne + chrX_6_8665001 chrX_8665001 RAL-382 3677 chrX 4409092 4409162 chrX 4409227 4409284 26 133 6.0 6.5 6.2 3.6 192 chrX 4409092 intron CR32773 - chrX 4409188 intron CR32773 - chrX 4409284 intron CR32773 - chrX_26_4405001 chrX_4405001 RAL-382 3678 chrX 4436468 4436493 chrX 4436595 4436626 7 130 6.0 11.5 8.8 0.7 158 chrX 4436468 intron,intron CR32773 -,bi + chrX 4436547 intron,intron CR32773 -,bi + chrX 4436626 intron,intron CR32773 -,bi + chrX_7_4435001 chrX_4435001 RAL-382 3679 chrX 4660776 4660848 chrX 4660924 4660990 11 148 7.0 0.0 3.5 2.4 214 chrX 4660776 intron CG3009 - chrX 4660883 intron CG3009 - chrX 4660990 intron CG3009 - chrX_11_4660001 chrX_4660001 RAL-382 3680 chrX 4673398 4673422 chrX 4673585 4673608 4 187 2.0 12.5 7.2 0.5 210 chrX 4673398 intron rap - chrX 4673503 intron rap - chrX 4673608 intron rap - chrX_4_4670001 chrX_4670001 RAL-382 3681 chrX 4700350 4700417 chrX 4700742 4700810 jockey 28 393 8.0 14.0 11.0 2.3 460 chrX 4700350 3` UTR ctp + chrX 4700580 3` UTR ctp + chrX 4700810 3` UTR ctp + chrX_28_4700001 chrX_4700001 RAL-382 3682 chrX 4717307 4717373 chrX 4717878 4717934 13 570 5.5 5.5 5.5 2.0 627 chrX 4717307 intron Proc-R + chrX 4717620 intron Proc-R + chrX 4717934 intron Proc-R + chrX_13_4715001 chrX_4715001 RAL-382 3683 chrX 4744108 4744149 chrX 4744256 4744297 9 148 4.0 1.5 2.8 2.4 189 chrX 4744108 intergenic not near genes chrX 4744202 intergenic not near genes chrX 4744297 intergenic not near genes chrX_9_4740001 chrX_4740001 RAL-382 3684 chrX 4744752 4744828 chrX 4744887 4744889 6 122 4.5 2.5 3.5 1.3 137 chrX 4744752 intergenic not near genes chrX 4744820 intergenic not near genes chrX 4744889 intergenic not near genes chrX_6_4740001 chrX_4740001 RAL-382 3685 chrX 4759346 4759400 chrX 4759472 4759526 24 124 9.0 5.5 7.2 2.9 180 chrX 4759346 intergenic not near genes chrX 4759436 intergenic not near genes chrX 4759526 intergenic not near genes chrX_24_4755001 chrX_4755001 RAL-382 3686 chrX 4763210 4763274 chrX 4763748 4763812 Stalker4 27 535 8.5 7.5 8.0 3.0 602 chrX 4763210 intergenic not near genes chrX 4763511 intergenic not near genes chrX 4763812 intergenic not near genes chrX_27_4760001 chrX_4760001 RAL-382 3687 chrX 4792338 4792396 chrX 4792814 4792879 jockey 15 481 5.5 7.0 6.2 2.1 541 chrX 4792338 intergenic not near genes chrX 4792608 intergenic not near genes chrX 4792879 intergenic not near genes chrX_15_4790001 chrX_4790001 RAL-382 3688 chrX 4827937 4827993 chrX 4835338 4835414 Stalker4 15 7412 3.0 5.0 4.0 3.0 7477 chrX 4827937 intergenic not near genes chrX 4831676 intergenic not near genes chrX 4835414 intergenic not near genes chrX_15_4830001 chrX_4830001 RAL-382 3689 chrX 4869665 4869686 chrX 4869812 4869833 9 146 10.5 7.0 8.8 0.9 168 chrX 4869665 intron CG42594 + chrX 4869749 intron CG42594 + chrX 4869833 intron CG42594 + chrX_9_4865001 chrX_4865001 RAL-382 3690 chrX 4965517 4965576 chrX 4965647 4965706 13 130 2.0 8.5 5.2 2.1 189 chrX 4965517 intron CR44833 - chrX 4965612 intron CR44833 - chrX 4965706 intron CR44833 - chrX_13_4965001 chrX_4965001 RAL-382 3691 chrX 4990002 4990074 chrX 4997266 4997338 roo 29 7263 7.0 8.5 7.8 3.3 7336 chrX 4990002 intron CR44833 - chrX 4993670 intron CR44833 - chrX 4997338 intron CR44833 - chrX_29_4990001 chrX_4990001 RAL-382 3692 chrX 5096232 5096301 chrX 5103847 5103916 springer 16 7614 2.0 8.0 5.0 2.7 7684 chrX 5096232 intron,intron CG15465 +,rg + chrX 5100074 intron,intron CG15465 +,rg + chrX 5103916 intron,intron CG15465 +,rg + chrX_16_5100001 chrX_5100001 RAL-382 3693 chrX 5105419 5105458 chrX 5105557 5105570 10 139 8.0 14.0 11.0 0.8 151 chrX 5105419 intron,intron CG15465 +,rg + chrX 5105494 intron,intron CG15465 +,rg + chrX 5105570 intron,intron CG15465 +,rg + chrX_10_5105001 chrX_5105001 RAL-382 3694 chrX 5131353 5131424 chrX 5131484 5131537 18 126 5.5 4.0 4.8 3.1 184 chrX 5131353 intron,intron CG15465 +,rg + chrX 5131445 intron,intron CG15465 +,rg + chrX 5131537 intron,intron CG15465 +,rg + chrX_18_5130001 chrX_5130001 RAL-382 3695 chrX 5220342 5220416 chrX 5220633 5220651 5 271 10.0 5.0 7.5 0.6 309 chrX 5220342 intron,intron CG15465 +,rg + chrX 5220496 intron,intron CG15465 +,rg + chrX 5220651 intron,intron CG15465 +,rg + chrX_5_5220001 chrX_5220001 RAL-382 3696 chrX 5323025 5323101 chrX 5323337 5323428 11 326 4.5 0.0 2.2 3.4 403 chrX 5323025 intergenic Rnp4F - chrX 5323226 intergenic not near genes chrX 5323428 intergenic Mcm3 + chrX_11_5320001 chrX_5320001 RAL-382 3697 chrX 5338664 5338728 chrX 5339967 5340026 jockey 6 1297 8.0 3.0 5.5 0.9 1362 chrX 5338664 intergenic not near genes chrX 5339345 intergenic not near genes chrX 5340026 intergenic SK + chrX_6_5335001 chrX_5335001 RAL-382 3698 chrX 5349244 5349305 chrX 5349371 5349432 21 127 9.0 7.5 8.2 2.3 188 chrX 5349244 intron SK + chrX 5349338 intron SK + chrX 5349432 intron SK + chrX_21_5345001 chrX_5345001 RAL-382 3699 chrX 5350252 5350296 chrX 5350411 5350455 11 157 3.0 8.0 5.5 1.7 203 chrX 5350252 intron SK + chrX 5350354 intron SK + chrX 5350455 intron SK + chrX_11_5350001 chrX_5350001 RAL-382 3700 chrX 5354010 5354022 chrX 5354154 5354166 5 144 5.5 15.5 10.5 0.4 156 chrX 5354010 intron SK + chrX 5354088 intron SK + chrX 5354166 intron SK + chrX_5_5350001 chrX_5350001 RAL-382 3701 chrX 5481021 5481092 chrX 5485023 5485102 I-element 9 4009 0.0 0.5 0.2 7.5 4081 chrX 5481021 intron SPR + chrX 5483062 intron SPR + chrX 5485102 intron SPR + chrX_9_5480001 chrX_5480001 RAL-382 3702 chrX 5512004 5512084 chrX 5512137 5512205 18 135 4.5 1.5 3.0 4.5 201 chrX 5512004 intergenic not near genes chrX 5512104 intergenic not near genes chrX 5512205 intergenic not near genes chrX_18_5510001 chrX_5510001 RAL-382 3703 chrX 5524800 5524823 chrX 5528713 5528736 412 14 3912 18.5 5.5 12.0 1.1 3936 chrX 5524800 intergenic snoRNA:Psi28S-3342 - chrX 5526768 intergenic not near genes chrX 5528736 intergenic Vsx2 - chrX_14_5525001 chrX_5525001 RAL-382 3704 chrX 5727373 5727416 chrX 5732162 5732205 Doc 21 4789 7.0 6.5 6.8 2.7 4832 chrX 5727373 intron CG32758 - chrX 5729789 intron CG32758 - chrX 5732205 intron CG32758 - chrX_21_5725001 chrX_5725001 RAL-382 3705 chrX 5786537 5786560 chrX 5786670 5786693 6 132 9.5 3.5 6.5 0.8 156 chrX 5786537 intron CG42699 + chrX 5786615 intron CG42699 + chrX 5786693 intron CG42699 + chrX_6_5785001 chrX_5785001 RAL-382 3706 chrX 5786561 5786606 chrX 5786659 5786739 19 130 4.0 3.5 3.8 4.0 178 chrX 5786561 intron CG42699 + chrX 5786650 intron CG42699 + chrX 5786739 intron CG42699 + chrX_19_5785001 chrX_5785001 RAL-382 3707 chrX 5819124 5819194 chrX 5819264 5819295 21 137 7.0 9.5 8.2 2.3 171 chrX 5819124 exon CG15765 + chrX 5819210 intron CG15765 + chrX 5819295 intron CG15765 + chrX_21_5815001 chrX_5815001 RAL-382 3708 chrX 5883769 5883789 chrX 5884060 5884080 pogo 5 288 14.0 8.5 11.2 0.4 311 chrX 5883769 intron CR45668 - chrX 5883924 intron CR45668 - chrX 5884080 intron CR45668 - chrX_5_5880001 chrX_5880001 RAL-382 3709 chrX 5883790 5883832 chrX 5884055 5884114 pogo 12 288 6.0 6.5 6.2 1.7 324 chrX 5883790 intron CR45668 - chrX 5883952 intron CR45668 - chrX 5884114 intron CR45668 - chrX_12_5880001 chrX_5880001 RAL-382 3710 chrX 5884127 5884181 chrX 5884410 5884472 pogo 26 288 12.0 5.0 8.5 2.7 345 chrX 5884127 intron CR45668 - chrX 5884300 intron CR45668 - chrX 5884472 intron CR45668 - chrX_26_5880001 chrX_5880001 RAL-382 3711 chrX 5886242 5886312 chrX 5886883 5886928 20 633 10.5 7.5 9.0 2.0 686 chrX 5886242 intron CR45668 - chrX 5886585 intron CR45668 - chrX 5886928 intron CR45668 - chrX_20_5885001 chrX_5885001 RAL-382 3712 chrX 5966766 5966816 chrX 5966893 5966913 12 123 5.0 7.5 6.2 1.7 147 chrX 5966766 intron Grip + chrX 5966840 intron Grip + chrX 5966913 intron Grip + chrX_12_5965001 chrX_5965001 RAL-382 3713 chrX 6003282 6003312 chrX 6003389 6003420 8 123 2.0 8.5 5.2 1.3 138 chrX 6003282 intron CR44498 + chrX 6003351 intron CR44498 + chrX 6003420 intron CR44498 + chrX_8_6000001 chrX_6000001 RAL-382 3714 chrX 6080783 6080820 chrX 6080917 6080954 10 133 9.0 2.5 5.8 1.5 171 chrX 6080783 intron CG4660 - chrX 6080868 intron CG4660 - chrX 6080954 intron CG4660 - chrX_10_6080001 chrX_6080001 RAL-382 3715 chrX 6164253 6164326 chrX 6164384 6164462 26 135 7.5 8.0 7.8 3.0 209 chrX 6164253 intron Ca-alpha1T - chrX 6164358 intron Ca-alpha1T - chrX 6164462 intron Ca-alpha1T - chrX_26_6160001 chrX_6160001 RAL-382 3716 chrX 6171550 6171609 chrX 6179033 6179062 Quasimodo 16 7480 9.5 5.5 7.5 1.9 7512 chrX 6171550 intron Ca-alpha1T - chrX 6175306 intron Ca-alpha1T - chrX 6179062 intron Ca-alpha1T - chrX_16_6175001 chrX_6175001 RAL-382 3717 chrX 6215486 6215523 chrX 6215617 6215654 10 128 7.5 5.5 6.5 1.3 168 chrX 6215486 intergenic not near genes chrX 6215570 intergenic not near genes chrX 6215654 intergenic not near genes chrX_10_6215001 chrX_6215001 RAL-382 3718 chrX 6335212 6335232 chrX 6337727 6337792 Tirant 12 2556 4.5 6.0 5.2 1.9 2580 chrX 6335212 intergenic not near genes chrX 6336502 intergenic not near genes chrX 6337792 5` UTR CG3842 + chrX_12_6335001 chrX_6335001 RAL-382 3719 chrX 6344415 6344477 chrX 6344550 6344597 21 134 9.5 0.0 4.8 3.6 182 chrX 6344415 intergenic not near genes chrX 6344506 intergenic not near genes chrX 6344597 intergenic not near genes chrX_21_6340001 chrX_6340001 RAL-382 3720 chrX 6392832 6392892 chrX 6397640 6397707 Doc 19 4814 5.5 6.5 6.0 2.7 4875 chrX 6392832 intergenic not near genes chrX 6395270 intergenic not near genes chrX 6397707 intergenic not near genes chrX_19_6395001 chrX_6395001 RAL-382 3721 chrX 6429965 6429992 chrX 6435486 6435496 Rt1c 9 5518 9.5 12.0 10.8 0.8 5531 chrX 6429965 intron CG42340 - chrX 6432730 intron CG42340 - chrX 6435496 intron CG42340 - chrX_9_6430001 chrX_6430001 RAL-382 3722 chrX 6445260 6445330 chrX 6451068 6451138 297 13 5808 6.0 5.0 5.5 2.0 5878 chrX 6445260 intron CG42340 - chrX 6448199 intron CG42340 - chrX 6451138 intron CG42340 - chrX_13_6445001 chrX_6445001 RAL-382 3723 chrX 6487933 6487981 chrX 6488065 6488107 14 126 8.5 14.0 11.2 1.1 174 chrX 6487933 intron CG42340 - chrX 6488020 intron CG42340 - chrX 6488107 intron CG42340 - chrX_14_6485001 chrX_6485001 RAL-382 3724 chrX 6498916 6498937 chrX 6499327 6499348 10 410 15.0 7.5 11.2 0.8 432 chrX 6498916 intron CG42340 - chrX 6499132 intron CG42340 - chrX 6499348 intron CG42340 - chrX_10_6495001 chrX_6495001 RAL-382 3725 chrX 6562775 6562849 chrX 6571307 6571346 Tirant 20 8518 6.0 7.0 6.5 2.7 8571 chrX 6562775 intron CG34417 + chrX 6567060 intron CG34417 + chrX 6571346 intron CG34417 + chrX_20_6565001 chrX_6565001 RAL-382 3726 chrX 6591806 6591844 chrX 6591941 6591979 17 135 8.0 0.0 4.0 3.4 173 chrX 6591806 intron Pat1 + chrX 6591892 intron Pat1 + chrX 6591979 intron Pat1 + chrX_17_6590001 chrX_6590001 RAL-382 3727 chrX 6605483 6605487 chrX 6608547 6608551 Burdock 4 3064 11.5 2.0 6.8 0.5 3068 chrX 6605483 intron pigs + chrX 6607017 intron pigs + chrX 6608551 intron pigs + chrX_4_6605001 chrX_6605001 RAL-382 3728 chrX 6618425 6618474 chrX 6618553 6618602 18 127 12.5 9.5 11.0 1.5 177 chrX 6618425 intron pigs + chrX 6618514 intron pigs + chrX 6618602 intron pigs + chrX_18_6615001 chrX_6615001 RAL-382 3729 chrX 6629738 6629791 chrX 6629875 6629927 17 137 5.5 4.5 5.0 2.8 189 chrX 6629738 intron pigs + chrX 6629832 intron pigs + chrX 6629927 intron pigs + chrX_17_6625001 chrX_6625001 RAL-382 3730 chrX 6652979 6653029 chrX 6653102 6653154 15 124 9.0 13.0 11.0 1.2 175 chrX 6652979 3` UTR pigs + chrX 6653066 intergenic CG3226 -,pigs + chrX 6653154 3` UTR CG3226 - chrX_15_6650001 chrX_6650001 RAL-382 3731 chrX 6733644 6733661 chrX 6733771 6733788 6 127 11.0 9.5 10.2 0.5 144 chrX 6733644 intron,intron CG3168 -,CR43461 + chrX 6733716 intron,intron CG3168 -,CR43461 + chrX 6733788 intron,intron CG3168 -,CR43461 + chrX_6_6730001 chrX_6730001 RAL-382 3732 chrX 6737477 6737551 chrX 6737609 6737682 20 122 7.0 6.5 6.8 2.6 205 chrX 6737477 intron CG3168 - chrX 6737580 intron CG3168 - chrX 6737682 intron CG3168 - chrX_20_6735001 chrX_6735001 RAL-382 3733 chrX 6792042 6792091 chrX 6792177 6792232 14 140 4.0 7.5 5.8 2.1 190 chrX 6792042 intron C3G - chrX 6792137 intron C3G - chrX 6792232 intron C3G - chrX_14_6790001 chrX_6790001 RAL-382 3734 chrX 6814227 6814270 chrX 6814363 6814396 6 134 2.5 1.5 2.0 2.0 169 chrX 6814227 exon iav + chrX 6814312 intron iav + chrX 6814396 intron iav + chrX_6_6810001 chrX_6810001 RAL-382 3735 chrX 6841326 6841401 chrX 6841454 6841511 15 122 0.0 3.5 1.8 5.4 185 chrX 6841326 intron CG14435 - chrX 6841418 intron CG14435 - chrX 6841511 exon CG14435 - chrX_15_6840001 chrX_6840001 RAL-382 3736 chrX 6865740 6865796 chrX 6865871 6865930 18 133 12.0 5.5 8.8 1.8 190 chrX 6865740 intron CG14434 - chrX 6865835 intron CG14434 - chrX 6865930 intron CG14434 - chrX_18_6865001 chrX_6865001 RAL-382 3737 chrX 6884816 6884817 chrX 12946234 12946235 5 6061418 34.0 32.0 33.0 0.1 6061419 chrX 6884816 intergenic not near genes chrX 9915526 intergenic not near genes chrX 12946235 3` UTR fne + chrX_5_9915001 chrX_9915001 RAL-382 3738 chrX 6897655 6897711 chrX 6897796 6897871 20 158 0.5 5.5 3.0 5.0 216 chrX 6897655 intergenic not near genes chrX 6897763 intergenic not near genes chrX 6897871 intergenic not near genes chrX_20_6895001 chrX_6895001 RAL-382 3739 chrX 6901340 6901376 chrX 6901463 6901502 11 122 7.0 7.5 7.2 1.3 162 chrX 6901340 intergenic not near genes chrX 6901421 intergenic not near genes chrX 6901502 intergenic not near genes chrX_11_6900001 chrX_6900001 RAL-382 3740 chrX 6989472 6989528 chrX 6989608 6989665 18 137 6.5 10.5 8.5 1.9 193 chrX 6989472 intron ogre - chrX 6989568 intron ogre - chrX 6989665 intron ogre - chrX_18_6985001 chrX_6985001 RAL-382 3741 chrX 7023562 7023630 chrX 7031001 7031030 Tabor 23 7437 6.5 7.0 6.8 2.9 7468 chrX 7023562 intron CG12541 - chrX 7027296 intron CG12541 - chrX 7031030 intron CG12541 - chrX_23_7025001 chrX_7025001 RAL-382 3742 chrX 7125220 7125265 chrX 7134413 7134473 roo 18 9208 1.0 7.0 4.0 3.6 9253 chrX 7125220 intergenic not near genes chrX 7129846 intergenic not near genes chrX 7134473 intergenic not near genes chrX_18_7125001 chrX_7125001 RAL-382 3743 chrX 7213505 7213515 chrX 7213642 7213656 6 140 17.5 11.0 14.2 0.4 151 chrX 7213505 intron,intron CG9650 +,CR44357 - chrX 7213580 intron,intron CG9650 +,CR44357 - chrX 7213656 intron,intron CG9650 +,CR44357 - chrX_6_7210001 chrX_7210001 RAL-382 3744 chrX 7213517 7213562 chrX 7213641 7213704 16 136 9.0 11.0 10.0 1.5 187 chrX 7213517 intron,intron CG9650 +,CR44357 - chrX 7213610 intron,intron CG9650 +,CR44357 - chrX 7213704 intron,intron CG9650 +,CR44357 - chrX_16_7210001 chrX_7210001 RAL-382 3745 chrX 7235516 7235539 chrX 7235653 7235676 8 137 7.0 5.0 6.0 1.1 160 chrX 7235516 intron,intron CG9650 +,CR44357 - chrX 7235596 intron,intron CG9650 +,CR44357 - chrX 7235676 intron,intron CG9650 +,CR44357 - chrX_8_7235001 chrX_7235001 RAL-382 3746 chrX 7294463 7294511 chrX 7294611 7294650 11 138 12.5 9.0 10.8 0.9 187 chrX 7294463 intron,intron CR44357 -,CG1677 - chrX 7294556 intron,intron CR44357 -,CG1677 - chrX 7294650 intron,intron CR44357 -,CG1677 - chrX_11_7290001 chrX_7290001 RAL-382 3747 chrX 7376944 7376946 chrX 7377076 7377078 4 132 8.0 8.0 8.0 0.4 134 chrX 7376944 intron,intron CR44357 -,CG1677 - chrX 7377011 intron,intron CR44357 -,CG1677 - chrX 7377078 intron,intron CR44357 -,CG1677 - chrX_4_7375001 chrX_7375001 RAL-382 3748 chrX 7702868 7702924 chrX 7703357 7703413 jockey 22 487 8.5 9.0 8.8 2.2 545 chrX 7702868 intron CHES-1-like - chrX 7703140 intron CHES-1-like - chrX 7703413 intron CHES-1-like - chrX_22_7700001 chrX_7700001 RAL-382 3749 chrX 7784175 7784258 chrX 7784538 7784610 jockey 5 357 0.0 4.5 2.2 1.6 435 chrX 7784175 intergenic not near genes chrX 7784392 intergenic not near genes chrX 7784610 intergenic not near genes chrX_5_7780001 chrX_7780001 RAL-382 3750 chrX 7832394 7832459 chrX 7832533 7832598 16 137 4.0 6.0 5.0 2.7 204 chrX 7832394 intron CG1402 + chrX 7832496 intron CG1402 + chrX 7832598 intron CG1402 + chrX_16_7830001 chrX_7830001 RAL-382 3751 chrX 7845688 7845752 chrX 7847219 7847293 hopper2 28 1540 8.0 6.5 7.2 3.4 1605 chrX 7845688 intergenic not near genes chrX 7846490 intergenic not near genes chrX 7847293 intergenic not near genes chrX_28_7845001 chrX_7845001 RAL-382 3752 chrX 7883909 7883931 chrX 7884024 7884093 12 152 4.5 7.5 6.0 1.7 184 chrX 7883909 exon Ir7f - chrX 7884001 exon Ir7f - chrX 7884093 intergenic Ir7f - chrX_12_7880001 chrX_7880001 RAL-382 3753 chrX 8031390 8031448 chrX 8035749 8035807 Juan 29 4358 8.5 27.0 17.8 1.5 4417 chrX 8031390 intergenic not near genes chrX 8033598 intergenic not near genes chrX 8035807 3` UTR CG2233 - chrX_29_8030001 chrX_8030001 RAL-382 3754 chrX 8085525 8085561 chrX 8085661 8085697 10 135 10.0 4.5 7.2 1.2 172 chrX 8085525 intron,5` UTR CG2256 -,CR45535 + chrX 8085611 intron,5` UTR CG2256 -,CR45535 + chrX 8085697 intron,5` UTR CG2256 -,CR45535 + chrX_10_8085001 chrX_8085001 RAL-382 3755 chrX 8085567 8085598 chrX 8085658 8085734 16 133 6.0 4.5 5.2 2.6 167 chrX 8085567 intron,5` UTR CG2256 -,CR45535 + chrX 8085650 intron,5` UTR CG2256 -,CR45535 + chrX 8085734 intron,5` UTR CG2256 -,CR45535 + chrX_16_8085001 chrX_8085001 RAL-382 3756 chrX 8092251 8092255 chrX 8092386 8092390 5 135 14.5 9.0 11.8 0.4 139 chrX 8092251 intron Ubc-E2H - chrX 8092320 intron Ubc-E2H - chrX 8092390 intron Ubc-E2H - chrX_5_8090001 chrX_8090001 RAL-382 3757 chrX 8092260 8092319 chrX 8092378 8092418 15 131 6.0 7.5 6.8 1.9 158 chrX 8092260 intron Ubc-E2H - chrX 8092339 intron Ubc-E2H - chrX 8092418 intron Ubc-E2H - chrX_15_8090001 chrX_8090001 RAL-382 3758 chrX 8113029 8113075 chrX 8113352 8113389 25 340 3.5 6.5 5.0 4.2 360 chrX 8113029 intron Gclc - chrX 8113209 intron Gclc - chrX 8113389 intron Gclc - chrX_25_8110001 chrX_8110001 RAL-382 3759 chrX 8305158 8305173 chrX 8305279 8305281 6 119 12.5 8.5 10.5 0.5 123 chrX 8305158 intron nAChRalpha3 - chrX 8305220 intron nAChRalpha3 - chrX 8305281 intron nAChRalpha3 - chrX_6_8305001 chrX_8305001 RAL-382 3760 chrX 8305174 8305217 chrX 8305277 8305337 8 122 6.5 8.5 7.5 0.9 163 chrX 8305174 intron nAChRalpha3 - chrX 8305256 intron nAChRalpha3 - chrX 8305337 intron nAChRalpha3 - chrX_8_8305001 chrX_8305001 RAL-382 3761 chrX 8364803 8364877 chrX 8365250 8365341 BS 24 462 6.5 0.0 3.2 5.7 538 chrX 8364803 intron nAChRalpha3 - chrX 8365072 intron nAChRalpha3 - chrX 8365341 intron nAChRalpha3 - chrX_24_8365001 chrX_8365001 RAL-382 3762 chrX 8370695 8370703 chrX 10710702 10710702 4 2340005 13.5 24.0 18.8 0.2 2340007 chrX 8370695 intergenic not near genes chrX 9540698 intron CG32700 - chrX 10710702 intergenic X11Lbeta +,CG32676 - chrX_4_9540001 chrX_9540001 RAL-382 3763 chrX 8371147 8371167 chrX 8371317 8371359 4 191 6.0 2.5 4.2 0.8 212 chrX 8371147 intergenic not near genes chrX 8371253 intergenic not near genes chrX 8371359 intergenic not near genes chrX_4_8370001 chrX_8370001 RAL-382 3764 chrX 8377867 8377890 chrX 8377994 8378017 6 127 7.5 3.5 5.5 0.9 150 chrX 8377867 intergenic not near genes chrX 8377942 intergenic not near genes chrX 8378017 intergenic not near genes chrX_6_8375001 chrX_8375001 RAL-382 3765 chrX 8407086 8407147 chrX 8407335 8407396 10 247 2.5 6.5 4.5 1.8 310 chrX 8407086 5` UTR CG11190 - chrX 8407241 5` UTR CG11190 - chrX 8407396 intergenic CG11190 - chrX_10_8405001 chrX_8405001 RAL-382 3766 chrX 8421550 8421613 chrX 8421683 8421746 20 133 5.5 11.5 8.5 2.1 196 chrX 8421550 intron Trf2 + chrX 8421648 intron Trf2 + chrX 8421746 intron Trf2 + chrX_20_8420001 chrX_8420001 RAL-382 3767 chrX 8496307 8496372 chrX 8496679 8496744 38 369 4.0 7.0 5.5 5.8 437 chrX 8496307 intron CG33181 + chrX 8496526 intron CG33181 + chrX 8496744 intron CG33181 + chrX_38_8495001 chrX_8495001 RAL-382 3768 chrX 8500892 8500957 chrX 8501106 8501172 14 214 5.5 0.0 2.8 3.7 280 chrX 8500892 intron CG33181 + chrX 8501032 intron CG33181 + chrX 8501172 intron CG33181 + chrX_14_8500001 chrX_8500001 RAL-382 3769 chrX 8509080 8509148 chrX 8509207 8509269 21 126 0.5 5.5 3.0 5.2 189 chrX 8509080 intron CG33181 + chrX 8509174 intron CG33181 + chrX 8509269 intron CG33181 + chrX_21_8505001 chrX_8505001 RAL-382 3770 chrX 8544098 8544162 chrX 8544227 8544291 29 129 6.0 10.0 8.0 3.2 193 chrX 8544098 intron Nrg + chrX 8544194 intron Nrg + chrX 8544291 intron Nrg + chrX_29_8540001 chrX_8540001 RAL-382 3771 chrX 8727354 8727420 chrX 8727481 8727547 20 127 4.5 7.0 5.8 2.9 193 chrX 8727354 intergenic not near genes chrX 8727450 intergenic not near genes chrX 8727547 intergenic not near genes chrX_20_8725001 chrX_8725001 RAL-382 3772 chrX 8743226 8743263 chrX 8743354 8743391 7 128 2.0 12.5 7.2 0.9 165 chrX 8743226 intergenic not near genes chrX 8743308 intergenic not near genes chrX 8743391 intergenic not near genes chrX_7_8740001 chrX_8740001 RAL-382 3773 chrX 8771193 8771247 chrX 8771320 8771375 4 128 9.5 8.0 8.8 0.4 182 chrX 8771193 intron Lim1 - chrX 8771284 intron Lim1 - chrX 8771375 intron Lim1 - chrX_4_8770001 chrX_8770001 RAL-382 3774 chrX 8877738 8877810 chrX 8877912 8877984 17 174 4.5 8.5 6.5 2.3 246 chrX 8877738 intron Moe - chrX 8877861 intron Moe - chrX 8877984 intron Moe - chrX_17_8875001 chrX_8875001 RAL-382 3775 chrX 8893181 8893223 chrX 8893300 8893353 17 129 15.0 11.0 13.0 1.2 172 chrX 8893181 intron Moe - chrX 8893267 intron Moe - chrX 8893353 intron Moe - chrX_17_8890001 chrX_8890001 RAL-382 3776 chrX 8893225 8893236 chrX 8893296 8893350 9 121 11.5 11.5 11.5 0.7 125 chrX 8893225 intron Moe - chrX 8893288 intron Moe - chrX 8893350 intron Moe - chrX_9_8890001 chrX_8890001 RAL-382 3777 chrX 8894948 8894999 chrX 8895083 8895135 9 135 11.5 7.5 9.5 0.9 187 chrX 8894948 intron Moe - chrX 8895042 intron Moe - chrX 8895135 intron Moe - chrX_9_8895001 chrX_8895001 RAL-382 3778 chrX 8915235 8915269 chrX 8915358 8915405 11 130 6.5 8.0 7.2 1.3 170 chrX 8915235 intron rdgA + chrX 8915320 intron rdgA + chrX 8915405 intron rdgA + chrX_11_8915001 chrX_8915001 RAL-382 3779 chrX 8920926 8920956 chrX 8921055 8921058 5 121 9.5 10.0 9.8 0.5 132 chrX 8920926 intron rdgA + chrX 8920992 intron rdgA + chrX 8921058 intron rdgA + chrX_5_8920001 chrX_8920001 RAL-382 3780 chrX 8922289 8922354 chrX 8922773 8922838 jockey 16 481 5.0 7.0 6.0 2.3 549 chrX 8922289 intron rdgA + chrX 8922564 intron rdgA + chrX 8922838 intron rdgA + chrX_16_8920001 chrX_8920001 RAL-382 3781 chrX 8948714 8948781 chrX 8956274 8956340 roo 27 7559 8.0 9.0 8.5 2.8 7626 chrX 8948714 intron rdgA + chrX 8952527 intron rdgA + chrX 8956340 intron rdgA + chrX_27_8950001 chrX_8950001 RAL-382 3782 chrX 8957921 8957992 chrX 8958361 8958432 25 437 5.5 7.5 6.5 3.3 511 chrX 8957921 intron rdgA + chrX 8958176 intron rdgA + chrX 8958432 intron rdgA + chrX_25_8955001 chrX_8955001 RAL-382 3783 chrX 8967966 8967991 chrX 8968096 8968121 9 130 11.0 4.5 7.8 1.0 155 chrX 8967966 intron rdgA + chrX 8968044 intron rdgA + chrX 8968121 intron rdgA + chrX_9_8965001 chrX_8965001 RAL-382 3784 chrX 8968815 8968846 chrX 8968941 8968972 10 127 10.0 15.0 12.5 0.7 157 chrX 8968815 intron rdgA + chrX 8968894 intron rdgA + chrX 8968972 intron rdgA + chrX_10_8965001 chrX_8965001 RAL-382 3785 chrX 9041960 9041975 chrX 9042117 9042132 8 157 0.0 5.0 2.5 2.3 172 chrX 9041960 intron,intron CR43836 -,CG42388 + chrX 9042046 intron,intron CR43836 -,CG42388 + chrX 9042132 intron,intron CR43836 -,CG42388 + chrX_8_9040001 chrX_9040001 RAL-382 3786 chrX 9058918 9058958 chrX 9059028 9059065 9 116 9.0 6.0 7.5 1.1 147 chrX 9058918 intron CG15365 - chrX 9058992 intron CG15365 - chrX 9059065 intron CG15365 - chrX_9_9055001 chrX_9055001 RAL-382 3787 chrX 9062682 9062733 chrX 9062810 9062861 14 128 0.5 0.5 0.5 9.3 179 chrX 9062682 intron CG15365 - chrX 9062772 intron CG15365 - chrX 9062861 intron CG15365 - chrX_14_9060001 chrX_9060001 RAL-382 3788 chrX 9190749 9190755 chrX 9190885 9190896 7 140 16.5 15.0 15.8 0.4 147 chrX 9190749 intergenic CG12115 - chrX 9190822 intergenic CG12115 - chrX 9190896 intergenic CG12115 - chrX_7_9190001 chrX_9190001 RAL-382 3789 chrX 9190756 9190785 chrX 9190882 9190928 9 136 10.5 14.0 12.2 0.7 172 chrX 9190756 intergenic CG12115 - chrX 9190842 intergenic CG12115 - chrX 9190928 intergenic CG12115 - chrX_9_9190001 chrX_9190001 RAL-382 3790 chrX 9204813 9204821 chrX 9204946 9204954 4 132 14.5 16.5 15.5 0.2 141 chrX 9204813 intergenic not near genes chrX 9204884 intergenic not near genes chrX 9204954 intergenic not near genes chrX_4_9200001 chrX_9200001 RAL-382 3791 chrX 9204823 9204847 chrX 9204945 9204980 11 130 10.0 16.5 13.2 0.8 157 chrX 9204823 intergenic not near genes chrX 9204902 intergenic not near genes chrX 9204980 intergenic not near genes chrX_11_9200001 chrX_9200001 RAL-382 3792 chrX 9218040 9218060 chrX 9218166 9218180 6 135 22.0 4.0 13.0 0.4 140 chrX 9218040 3` UTR t - chrX 9218110 3` UTR t - chrX 9218180 3` UTR t - chrX_6_9215001 chrX_9215001 RAL-382 3793 chrX 9229862 9229933 chrX 9229992 9230063 34 129 8.5 13.5 11.0 2.8 201 chrX 9229862 intron CG12121 - chrX 9229962 intron CG12121 - chrX 9230063 intron CG12121 - chrX_34_9225001 chrX_9225001 RAL-382 3794 chrX 9337898 9337918 chrX 9338035 9338040 8 137 9.5 7.5 8.5 0.8 142 chrX 9337898 intron CG34449 - chrX 9337969 intron CG34449 - chrX 9338040 intron CG34449 - chrX_8_9335001 chrX_9335001 RAL-382 3795 chrX 9337922 9337932 chrX 9338033 9338074 5 135 7.0 7.5 7.2 0.6 152 chrX 9337922 intron CG34449 - chrX 9337998 intron CG34449 - chrX 9338074 exon CG34449 - chrX_5_9335001 chrX_9335001 RAL-382 3796 chrX 9337939 9337969 chrX 9338032 9338111 11 137 4.0 7.0 5.5 1.7 172 chrX 9337939 intron CG34449 - chrX 9338025 intron CG34449 - chrX 9338111 exon CG34449 - chrX_11_9335001 chrX_9335001 RAL-382 3797 chrX 9503211 9503211 chrX 22383088 22383377 10 12880107 29.0 141.0 85.0 0.1 12880166 chrX 9503211 3` UTR CG32700 - chrX 15943294 intron CG8924 + chrX 22383377 intergenic not near genes chrX_10_15940001 chrX_15940001 RAL-382 3798 chrX 9531612 9531659 chrX 9531742 9531783 14 129 10.0 0.0 5.0 2.3 171 chrX 9531612 intron CG32700 - chrX 9531698 intron CG32700 - chrX 9531783 intron CG32700 - chrX_14_9530001 chrX_9530001 RAL-382 3799 chrX 9575749 9575816 chrX 9576123 9576189 mdg3 18 371 4.5 6.5 5.5 2.8 440 chrX 9575749 intron,exon CG32699 -,CG42395 - chrX 9575969 intron,intron CG32699 -,CG42395 - chrX 9576189 intron,5` UTR CG32699 -,CG42395 - chrX_18_9575001 chrX_9575001 RAL-382 3800 chrX 9732335 9732379 chrX 9732461 9732511 6 127 2.5 6.5 4.5 1.1 176 chrX 9732335 intron Sp1 + chrX 9732423 intron Sp1 + chrX 9732511 intron Sp1 + chrX_6_9730001 chrX_9730001 RAL-382 3801 chrX 9758005 9758052 chrX 9758140 9758187 14 135 10.0 0.0 5.0 2.3 182 chrX 9758005 intergenic not near genes chrX 9758096 intergenic not near genes chrX 9758187 intergenic not near genes chrX_14_9755001 chrX_9755001 RAL-382 3802 chrX 9762612 9762634 chrX 9762743 9762769 5 133 10.0 5.0 7.5 0.6 157 chrX 9762612 intergenic not near genes chrX 9762690 intergenic not near genes chrX 9762769 intergenic not near genes chrX_5_9760001 chrX_9760001 RAL-382 3803 chrX 9762640 9762684 chrX 9762739 9762814 13 122 4.0 4.5 4.2 2.5 174 chrX 9762640 intergenic not near genes chrX 9762727 intergenic not near genes chrX 9762814 intergenic not near genes chrX_13_9760001 chrX_9760001 RAL-382 3804 chrX 9839300 9839326 chrX 9839433 9839459 15 133 6.0 5.5 5.8 2.2 159 chrX 9839300 intron CG32698 + chrX 9839380 intron CG32698 + chrX 9839459 intron CG32698 + chrX_15_9835001 chrX_9835001 RAL-382 3805 chrX 9845361 9845361 chrX 14544906 14544909 4 4699547 24.5 18.0 21.2 0.2 4699548 chrX 9845361 intron CG32698 + chrX 12195135 intron Ten-a + chrX 14544909 intergenic not near genes chrX_4_12195001 chrX_12195001 RAL-382 3806 chrX 9943752 9943760 chrX 9943882 9943890 4 130 18.0 11.0 14.5 0.3 138 chrX 9943752 intergenic not near genes chrX 9943821 intergenic not near genes chrX 9943890 intergenic not near genes chrX_4_9940001 chrX_9940001 RAL-382 3807 chrX 9943762 9943830 chrX 9943877 9943950 31 125 8.5 11.0 9.8 2.9 188 chrX 9943762 intergenic not near genes chrX 9943856 intergenic not near genes chrX 9943950 intergenic not near genes chrX_31_9940001 chrX_9940001 RAL-382 3808 chrX 10133591 10133616 chrX 10133727 10133753 7 137 10.0 15.5 12.8 0.5 162 chrX 10133591 intron,intron RhoU +,CR44894 - chrX 10133672 intron,intron RhoU +,CR44894 - chrX 10133753 intron,intron RhoU +,CR44894 - chrX_7_10130001 chrX_10130001 RAL-382 3809 chrX 10138174 10138240 chrX 10145728 10145794 412 24 7553 9.0 11.5 10.2 2.1 7620 chrX 10138174 intron,intron RhoU +,CR44894 - chrX 10141984 intron,intron RhoU +,CR44894 - chrX 10145794 intron,intron RhoU +,CR44894 - chrX_24_10140001 chrX_10140001 RAL-382 3810 chrX 10151882 10151937 chrX 10152008 10152064 8 127 6.5 9.5 8.0 0.9 182 chrX 10151882 intron CR44894 - chrX 10151973 intron CR44894 - chrX 10152064 intron CR44894 - chrX_8_10150001 chrX_10150001 RAL-382 3811 chrX 10216800 10216846 chrX 10216931 10216977 16 128 9.5 16.0 12.8 1.2 177 chrX 10216800 3` UTR l(1)G0230 + chrX 10216888 3` UTR l(1)G0230 + chrX 10216977 3` UTR l(1)G0230 + chrX_16_10215001 chrX_10215001 RAL-382 3812 chrX 10251757 10251824 chrX 10252095 10252162 28 338 10.0 8.0 9.0 2.8 405 chrX 10251757 intron Hk - chrX 10251960 intron Hk - chrX 10252162 intron Hk - chrX_28_10250001 chrX_10250001 RAL-382 3813 chrX 10267295 10267327 chrX 10276494 10276527 roo 15 9200 0.0 18.0 9.0 1.5 9232 chrX 10267295 3` UTR alpha-Man-I - chrX 10271911 intron alpha-Man-I - chrX 10276527 3` UTR alpha-Man-I - chrX_15_10270001 chrX_10270001 RAL-382 3814 chrX 10290498 10290528 chrX 10290651 10290681 14 152 10.0 12.0 11.0 1.2 183 chrX 10290498 intron alpha-Man-I - chrX 10290590 intron alpha-Man-I - chrX 10290681 intron alpha-Man-I - chrX_14_10290001 chrX_10290001 RAL-382 3815 chrX 10317503 10317578 chrX 10317632 10317706 26 128 5.0 10.5 7.8 3.0 203 chrX 10317503 intron alpha-Man-I - chrX 10317604 intron alpha-Man-I - chrX 10317706 intron alpha-Man-I - chrX_26_10315001 chrX_10315001 RAL-382 3816 chrX 10348757 10348818 chrX 10356372 10356433 springer 24 7615 9.5 9.0 9.2 2.4 7676 chrX 10348757 intergenic snoRNA:U3:9B + chrX 10352595 intergenic not near genes chrX 10356433 intergenic l(1)G0289 - chrX_24_10350001 chrX_10350001 RAL-382 3817 chrX 10367138 10367205 chrX 10367297 10367364 25 151 5.5 6.0 5.8 3.7 226 chrX 10367138 exon CG32679 - chrX 10367251 intron CG32679 - chrX 10367364 exon CG32679 - chrX_25_10365001 chrX_10365001 RAL-382 3818 chrX 10489556 10489614 chrX 10489749 10489769 21 189 8.0 0.5 4.2 4.0 213 chrX 10489556 intergenic not near genes chrX 10489662 intergenic not near genes chrX 10489769 intergenic not near genes chrX_21_10485001 chrX_10485001 RAL-382 3819 chrX 10525041 10525072 chrX 10532139 10532193 297 6 7115 6.5 6.5 6.5 0.8 7152 chrX 10525041 intron spri - chrX 10528617 intron spri - chrX 10532193 intron spri - chrX_6_10525001 chrX_10525001 RAL-382 3820 chrX 10550290 10550358 chrX 10550418 10550486 36 127 5.0 10.0 7.5 4.2 196 chrX 10550290 intron spri - chrX 10550388 intron spri - chrX 10550486 intron spri - chrX_36_10550001 chrX_10550001 RAL-382 3821 chrX 10550816 10550828 chrX 10552333 10552345 hobo 5 1517 8.5 6.0 7.2 0.6 1529 chrX 10550816 intron spri - chrX 10551580 intron spri - chrX 10552345 intron spri - chrX_5_10550001 chrX_10550001 RAL-382 3822 chrX 10550840 10550882 chrX 10552330 10552399 hobo 11 1507 4.0 5.5 4.8 1.9 1559 chrX 10550840 intron spri - chrX 10551620 intron spri - chrX 10552399 intron spri - chrX_11_10550001 chrX_10550001 RAL-382 3823 chrX 10642191 10642216 chrX 10648383 10648394 4 6182 21.0 33.5 27.2 0.1 6203 chrX 10642191 intron X11Lbeta + chrX 10645292 intron X11Lbeta + chrX 10648394 intron X11Lbeta + chrX_4_10645001 chrX_10645001 RAL-382 3824 chrX 10686005 10686042 chrX 10691192 10691229 roo 13 5186 12.5 0.5 6.5 1.7 5224 chrX 10686005 intron X11Lbeta + chrX 10688617 intron X11Lbeta + chrX 10691229 intron X11Lbeta + chrX_13_10685001 chrX_10685001 RAL-382 3825 chrX 10686045 10686077 chrX 10691185 10691249 roo 12 5179 6.5 0.5 3.5 2.7 5204 chrX 10686045 intron X11Lbeta + chrX 10688647 intron X11Lbeta + chrX 10691249 intron X11Lbeta + chrX_12_10685001 chrX_10685001 RAL-382 3826 chrX 10719069 10719140 chrX 10719214 10719274 10 137 0.0 11.0 5.5 1.5 205 chrX 10719069 intron CG32676 - chrX 10719172 intron CG32676 - chrX 10719274 intron CG32676 - chrX_10_10715001 chrX_10715001 RAL-382 3827 chrX 10730090 10730165 chrX 10730283 10730358 31 193 7.0 4.5 5.8 4.6 268 chrX 10730090 intron CG32676 - chrX 10730224 intron CG32676 - chrX 10730358 intron CG32676 - chrX_31_10730001 chrX_10730001 RAL-382 3828 chrX 10772630 10772692 chrX 10772763 10772825 Tirant 16 129 7.5 2.5 5.0 2.7 195 chrX 10772630 intron CG15211 + chrX 10772728 intron CG15211 + chrX 10772825 intron CG15211 + chrX_16_10770001 chrX_10770001 RAL-382 3829 chrX 10802990 10803042 chrX 10803123 10803175 23 130 13.0 9.0 11.0 1.9 185 chrX 10802990 intron Imp - chrX 10803082 intron Imp - chrX 10803175 intron Imp - chrX_23_10800001 chrX_10800001 RAL-382 3830 chrX 10886935 10886998 chrX 10887110 10887169 16 182 6.5 4.0 5.2 2.6 234 chrX 10886935 intron Ork1 - chrX 10887052 intron Ork1 - chrX 10887169 intron Ork1 - chrX_16_10885001 chrX_10885001 RAL-382 3831 chrX 10920616 10920691 chrX 10920757 10920832 22 137 7.5 0.0 3.8 4.6 216 chrX 10920616 3` UTR CG43901 + chrX 10920724 3` UTR CG43901 + chrX 10920832 3` UTR CG43901 + chrX_22_10920001 chrX_10920001 RAL-382 3832 chrX 10933894 10933938 chrX 10934030 10934076 13 137 0.0 11.5 5.8 1.9 182 chrX 10933894 intron Myo10A + chrX 10933985 intron Myo10A + chrX 10934076 intron Myo10A + chrX_13_10930001 chrX_10930001 RAL-382 3833 chrX 11005657 11005731 chrX 11005955 11006029 21 297 5.5 4.5 5.0 3.5 372 chrX 11005657 intron CG42339 - chrX 11005843 intron CG42339 - chrX 11006029 intron CG42339 - chrX_21_11005001 chrX_11005001 RAL-382 3834 chrX 11007223 11007265 chrX 11007337 11007401 16 134 5.0 6.5 5.8 2.4 178 chrX 11007223 intron CG42339 - chrX 11007312 intron CG42339 - chrX 11007401 intron CG42339 - chrX_16_11005001 chrX_11005001 RAL-382 3835 chrX 11095953 11096014 chrX 11103105 11103166 HMS-Beagle 27 7152 9.5 10.0 9.8 2.5 7213 chrX 11095953 intergenic not near genes chrX 11099560 intergenic not near genes chrX 11103166 intron CG42249 + chrX_27_11095001 chrX_11095001 RAL-382 3836 chrX 11109417 11109417 chrX 12946233 12946234 6 1836817 46.5 31.5 39.0 0.1 1836817 chrX 11109417 intron Hsp60 + chrX 12027826 exon Usp7 - chrX 12946234 3` UTR fne + chrX_6_12025001 chrX_12025001 RAL-382 3837 chrX 11166714 11166782 chrX 11166845 11166913 36 130 9.0 8.5 8.8 3.7 199 chrX 11166714 intergenic not near genes chrX 11166814 intergenic not near genes chrX 11166913 intergenic not near genes chrX_36_11165001 chrX_11165001 RAL-382 3838 chrX 11184238 11184275 chrX 11189329 11189385 flea 10 5120 5.0 5.0 5.0 1.7 5147 chrX 11184238 intergenic not near genes chrX 11186812 intergenic not near genes chrX 11189385 intergenic not near genes chrX_10_11185001 chrX_11185001 RAL-382 3839 chrX 11205262 11205275 chrX 11205388 11205401 6 126 14.0 10.5 12.2 0.5 139 chrX 11205262 intergenic not near genes chrX 11205332 intergenic not near genes chrX 11205401 intergenic not near genes chrX_6_11205001 chrX_11205001 RAL-382 3840 chrX 11205277 11205312 chrX 11205385 11205438 13 125 10.0 10.0 10.0 1.2 161 chrX 11205277 intergenic not near genes chrX 11205358 intergenic not near genes chrX 11205438 intergenic not near genes chrX_13_11205001 chrX_11205001 RAL-382 3841 chrX 11292951 11292962 chrX 11293077 11293088 7 126 12.0 0.0 6.0 1.0 137 chrX 11292951 intron CG44422 - chrX 11293020 intron CG44422 - chrX 11293088 intron CG44422 - chrX_7_11290001 chrX_11290001 RAL-382 3842 chrX 11297715 11297723 chrX 11297819 11297862 5 122 10.0 5.0 7.5 0.6 147 chrX 11297715 intron CG44422 - chrX 11297788 intron CG44422 - chrX 11297862 exon CG44422 - chrX_5_11295001 chrX_11295001 RAL-382 3843 chrX 11312016 11312086 chrX 11319419 11319489 Stalker2 16 7399 7.5 6.0 6.8 2.1 7473 chrX 11312016 intergenic not near genes chrX 11315752 intergenic not near genes chrX 11319489 intergenic not near genes chrX_16_11315001 chrX_11315001 RAL-382 3844 chrX 11338452 11338465 chrX 11338598 11338610 8 146 6.5 3.5 5.0 1.3 158 chrX 11338452 intron Kap3 - chrX 11338531 intron Kap3 - chrX 11338610 intron Kap3 - chrX_8_11335001 chrX_11335001 RAL-382 3845 chrX 11379718 11379786 chrX 11379913 11379981 32 193 6.0 7.0 6.5 4.3 263 chrX 11379718 intron dlg1 + chrX 11379850 intron dlg1 + chrX 11379981 intron dlg1 + chrX_32_11375001 chrX_11375001 RAL-382 3846 chrX 11380598 11380617 chrX 11380724 11380743 7 126 5.5 9.5 7.5 0.8 145 chrX 11380598 intron dlg1 + chrX 11380670 intron dlg1 + chrX 11380743 intron dlg1 + chrX_7_11380001 chrX_11380001 RAL-382 3847 chrX 11431608 11431617 chrX 11431734 11431744 4 132 0.0 18.0 9.0 0.4 136 chrX 11431608 3` UTR Evi5 - chrX 11431676 3` UTR Evi5 - chrX 11431744 3` UTR Evi5 - chrX_4_11430001 chrX_11430001 RAL-382 3848 chrX 11451213 11451223 chrX 11451616 11451626 8 402 18.0 12.0 15.0 0.5 413 chrX 11451213 intron Evi5 - chrX 11451420 intron Evi5 - chrX 11451626 intron Evi5 - chrX_8_11450001 chrX_11450001 RAL-382 3849 chrX 11451227 11451283 chrX 11451613 11451686 23 402 5.5 12.0 8.8 2.3 459 chrX 11451227 intron Evi5 - chrX 11451456 intron Evi5 - chrX 11451686 intron Evi5 - chrX_23_11450001 chrX_11450001 RAL-382 3850 chrX 11464754 11464827 chrX 11464883 11464956 39 126 8.0 7.0 7.5 4.6 202 chrX 11464754 intron CG43155 + chrX 11464855 intron CG43155 + chrX 11464956 intron CG43155 + chrX_39_11460001 chrX_11460001 RAL-382 3851 chrX 11535001 11535046 chrX 11541521 11541566 Burdock 17 6520 12.5 8.5 10.5 1.5 6565 chrX 11535001 intron Drak + chrX 11538284 intron Drak + chrX 11541566 intron Drak + chrX_17_11535001 chrX_11535001 RAL-382 3852 chrX 11571407 11571477 chrX 11571698 11571768 pogo 31 291 11.0 6.0 8.5 3.3 361 chrX 11571407 3` UTR,3` UTR CG11699 +,Kmn1 - chrX 11571588 3` UTR Kmn1 - chrX 11571768 3` UTR Kmn1 - chrX_31_11570001 chrX_11570001 RAL-382 3853 chrX 11632047 11632117 chrX 11632177 11632247 31 129 4.0 5.5 4.8 5.3 200 chrX 11632047 intron Ptp10D + chrX 11632147 intron Ptp10D + chrX 11632247 intron Ptp10D + chrX_31_11630001 chrX_11630001 RAL-382 3854 chrX 11633383 11633432 chrX 11640487 11640535 297 18 7102 8.0 10.5 9.2 1.8 7152 chrX 11633383 intron Ptp10D + chrX 11636959 intron Ptp10D + chrX 11640535 intron Ptp10D + chrX_18_11635001 chrX_11635001 RAL-382 3855 chrX 11645068 11645127 chrX 11648288 11648347 NOF 21 3218 7.5 10.5 9.0 2.1 3279 chrX 11645068 intron Ptp10D + chrX 11646708 intron Ptp10D + chrX 11648347 intron Ptp10D + chrX_21_11645001 chrX_11645001 RAL-382 3856 chrX 11661739 11661812 chrX 11661897 11661970 27 157 6.0 1.5 3.8 5.6 231 chrX 11661739 intron Ptp10D + chrX 11661854 intron Ptp10D + chrX 11661970 intron Ptp10D + chrX_27_11660001 chrX_11660001 RAL-382 3857 chrX 11685688 11685739 chrX 11685829 11685850 18 137 9.0 11.0 10.0 1.6 162 chrX 11685688 intron bif + chrX 11685769 intron bif + chrX 11685850 intron bif + chrX_18_11685001 chrX_11685001 RAL-382 3858 chrX 11706274 11706335 chrX 11706412 11706473 20 138 0.0 7.0 3.5 4.4 199 chrX 11706274 intergenic FucT6 - chrX 11706374 intergenic FucT6 - chrX 11706473 intergenic FucT6 - chrX_20_11705001 chrX_11705001 RAL-382 3859 chrX 11782903 11782913 chrX 11783026 11783043 4 128 10.0 14.0 12.0 0.3 140 chrX 11782903 intergenic not near genes chrX 11782973 intergenic not near genes chrX 11783043 intergenic not near genes chrX_4_11780001 chrX_11780001 RAL-382 3860 chrX 11804623 11804690 chrX 11804777 11804843 28 154 5.5 7.5 6.5 3.7 220 chrX 11804623 intron Hsc70-3 - chrX 11804733 intron Hsc70-3 - chrX 11804843 intron Hsc70-3 - chrX_28_11800001 chrX_11800001 RAL-382 3861 chrX 11880883 11880919 chrX 11881015 11881051 13 132 12.5 4.0 8.2 1.4 168 chrX 11880883 exon CG10353 - chrX 11880967 intron CG10353 - chrX 11881051 intron CG10353 - chrX_13_11880001 chrX_11880001 RAL-382 3862 chrX 11922317 11922378 chrX 11922500 11922561 26 183 8.0 8.0 8.0 2.9 244 chrX 11922317 exon Sclp - chrX 11922439 intron Sclp - chrX 11922561 intron Sclp - chrX_26_11920001 chrX_11920001 RAL-382 3863 chrX 12129327 12129383 chrX 12129563 12129619 15 236 9.0 7.5 8.2 1.6 292 chrX 12129327 intron Ten-a + chrX 12129473 intron Ten-a + chrX 12129619 intron Ten-a + chrX_15_12125001 chrX_12125001 RAL-382 3864 chrX 12136415 12136501 chrX 12136546 12136627 17 129 2.0 4.5 3.2 4.0 212 chrX 12136415 intron Ten-a + chrX 12136521 intron Ten-a + chrX 12136627 intron Ten-a + chrX_17_12135001 chrX_12135001 RAL-382 3865 chrX 12168095 12168135 chrX 12173587 12173627 I-element 6 5492 11.5 1.0 6.2 0.8 5532 chrX 12168095 intron Ten-a + chrX 12170861 intron Ten-a + chrX 12173627 intron Ten-a + chrX_6_12170001 chrX_12170001 RAL-382 3866 chrX 12176711 12176764 chrX 12176837 12176890 13 124 2.0 7.5 4.8 2.2 179 chrX 12176711 intron,3` UTR Ten-a +,CG1924 - chrX 12176800 intron,3` UTR Ten-a +,CG1924 - chrX 12176890 intron,3` UTR Ten-a +,CG1924 - chrX_13_12175001 chrX_12175001 RAL-382 3867 chrX 12184233 12184268 chrX 12184368 12184405 8 133 6.5 7.0 6.8 1.0 172 chrX 12184233 intron Ten-a + chrX 12184319 intron Ten-a + chrX 12184405 intron Ten-a + chrX_8_12180001 chrX_12180001 RAL-382 3868 chrX 12191550 12191585 chrX 12191688 12191723 17 138 5.5 12.5 9.0 1.7 173 chrX 12191550 intron Ten-a + chrX 12191636 intron Ten-a + chrX 12191723 intron Ten-a + chrX_17_12190001 chrX_12190001 RAL-382 3869 chrX 12225799 12225870 chrX 12225933 12225978 17 132 4.5 5.5 5.0 2.8 179 chrX 12225799 intron Ten-a + chrX 12225888 intron Ten-a + chrX 12225978 intron Ten-a + chrX_17_12225001 chrX_12225001 RAL-382 3870 chrX 12246916 12246962 chrX 12247062 12247108 7 144 10.0 0.0 5.0 1.2 192 chrX 12246916 intron Ten-a + chrX 12247012 intron Ten-a + chrX 12247108 intron Ten-a + chrX_7_12245001 chrX_12245001 RAL-382 3871 chrX 12272793 12272864 chrX 12272922 12272993 19 129 7.0 6.0 6.5 2.5 200 chrX 12272793 intron Ten-a + chrX 12272893 intron Ten-a + chrX 12272993 intron Ten-a + chrX_19_12270001 chrX_12270001 RAL-382 3872 chrX 12295274 12295330 chrX 12295400 12295456 17 125 8.5 7.0 7.8 1.9 182 chrX 12295274 exon Ten-a + chrX 12295365 intron Ten-a + chrX 12295456 intron Ten-a + chrX_17_12295001 chrX_12295001 RAL-382 3873 chrX 12301916 12301966 chrX 12303270 12303282 X-element 12 1341 3.5 0.0 1.8 4.3 1366 chrX 12301916 intron Ten-a + chrX 12302599 intron Ten-a + chrX 12303282 intron Ten-a + chrX_12_12300001 chrX_12300001 RAL-382 3874 chrX 12375440 12375491 chrX 12375588 12375637 13 147 9.0 5.0 7.0 1.6 197 chrX 12375440 intergenic Ir11a - chrX 12375538 intergenic Ir11a - chrX 12375637 exon Ir11a - chrX_13_12375001 chrX_12375001 RAL-382 3875 chrX 12381811 12381853 chrX 12385774 12385816 flea 21 3961 7.0 7.0 7.0 2.6 4005 chrX 12381811 intergenic not near genes chrX 12383814 intergenic not near genes chrX 12385816 intergenic not near genes chrX_21_12380001 chrX_12380001 RAL-382 3876 chrX 12392752 12392817 chrX 12392883 12392944 14 126 3.5 7.0 5.2 2.3 192 chrX 12392752 intergenic not near genes chrX 12392848 intergenic not near genes chrX 12392944 intergenic not near genes chrX_14_12390001 chrX_12390001 RAL-382 3877 chrX 12393048 12393090 chrX 12393181 12393211 9 132 1.5 6.0 3.8 1.9 163 chrX 12393048 intergenic not near genes chrX 12393130 intergenic not near genes chrX 12393211 intergenic not near genes chrX_9_12390001 chrX_12390001 RAL-382 3878 chrX 12430897 12430957 chrX 12431025 12431078 22 127 4.5 0.0 2.2 6.9 181 chrX 12430897 intergenic not near genes chrX 12430988 intergenic not near genes chrX 12431078 intergenic not near genes chrX_22_12430001 chrX_12430001 RAL-382 3879 chrX 12440382 12440401 chrX 12440514 12440533 11 132 0.0 17.5 8.8 1.1 151 chrX 12440382 intron Pkcdelta + chrX 12440458 intron Pkcdelta + chrX 12440533 intron Pkcdelta + chrX_11_12440001 chrX_12440001 RAL-382 3880 chrX 12449810 12449843 chrX 12449961 12449994 12 151 9.5 4.5 7.0 1.5 184 chrX 12449810 intron Pkcdelta + chrX 12449902 intron Pkcdelta + chrX 12449994 intron Pkcdelta + chrX_12_12445001 chrX_12445001 RAL-382 3881 chrX 12528815 12528839 chrX 12528941 12528965 11 126 16.5 7.0 11.8 0.9 150 chrX 12528815 intron CG43921 - chrX 12528890 intron CG43921 - chrX 12528965 intron CG43921 - chrX_11_12525001 chrX_12525001 RAL-382 3882 chrX 12533770 12533782 chrX 12533897 12533909 6 127 0.0 6.5 3.2 1.4 139 chrX 12533770 intron CG43921 - chrX 12533840 intron CG43921 - chrX 12533909 intron CG43921 - chrX_6_12530001 chrX_12530001 RAL-382 3883 chrX 12635402 12635409 chrX 12635537 12635544 7 135 10.5 13.0 11.8 0.5 142 chrX 12635402 intron Tomosyn + chrX 12635473 intron Tomosyn + chrX 12635544 intron Tomosyn + chrX_7_12635001 chrX_12635001 RAL-382 3884 chrX 12649914 12649914 chrX 18171788 18171809 5 5521888 27.5 13.5 20.5 0.2 5521895 chrX 12649914 intron Tomosyn + chrX 15410862 exon Cngl - chrX 18171809 3` UTR Frq1 + chrX_5_15410001 chrX_15410001 RAL-382 3885 chrX 9903232 9903232 chrX 12657092 12657093 4 2753860 29.0 42.0 35.5 0.1 2753861 chrX 9903232 intergenic not near genes chrX 11280162 intron CG44422 - chrX 12657093 3` UTR CkIalpha + chrX_4_11280001 chrX_11280001 RAL-382 3886 chrX 12754640 12754674 chrX 12754894 12754928 11 253 9.0 9.5 9.2 1.1 288 chrX 12754640 intergenic CR44619 + chrX 12754784 intergenic CR44619 + chrX 12754928 intergenic CR44619 + chrX_11_12750001 chrX_12750001 RAL-382 3887 chrX 12785382 12785442 chrX 12785509 12785569 19 126 7.5 10.0 8.8 1.9 187 chrX 12785382 intergenic Pde9 -,CG32647 - chrX 12785476 intergenic Pde9 - chrX 12785569 3` UTR Pde9 - chrX_19_12785001 chrX_12785001 RAL-382 3888 chrX 12921682 12921698 chrX 12922223 12922239 7 538 5.5 13.5 9.5 0.7 557 chrX 12921682 intron fne + chrX 12921960 intron fne + chrX 12922239 intron fne + chrX_7_12920001 chrX_12920001 RAL-382 3889 chrX 12930547 12930599 chrX 12937713 12937765 HMS-Beagle 20 7165 8.5 13.0 10.8 1.7 7218 chrX 12930547 intron fne + chrX 12934156 intron fne + chrX 12937765 intron fne + chrX_20_12930001 chrX_12930001 RAL-382 3890 chrX 11109417 11109417 chrX 12946234 12946234 4 1836817 46.5 32.0 39.2 0.1 1836817 chrX 11109417 intron Hsp60 + chrX 12027826 exon Usp7 - chrX 12946234 3` UTR fne + chrX_4_12025001 chrX_12025001 RAL-382 3891 chrX 12946234 12946234 chrX 18572524 18572525 4 5626291 31.5 44.0 37.8 0.1 5626291 chrX 12946234 3` UTR fne + chrX 15759380 intron Graf - chrX 18572525 intergenic not near genes chrX_4_15755001 chrX_15755001 RAL-382 3892 chrX 13109299 13109364 chrX 13109440 13109504 22 140 11.5 8.5 10.0 2.0 205 chrX 13109299 intron CG43313 - chrX 13109402 intron CG43313 - chrX 13109504 intron CG43313 - chrX_22_13105001 chrX_13105001 RAL-382 3893 chrX 13146553 13146604 chrX 13146691 13146742 23 138 11.0 5.0 8.0 2.6 189 chrX 13146553 intron CG32645 + chrX 13146648 intron CG32645 + chrX 13146742 intron CG32645 + chrX_23_13145001 chrX_13145001 RAL-382 3894 chrX 13236847 13236901 chrX 13236962 13237036 8 132 2.0 9.0 5.5 1.2 189 chrX 13236847 intron mew - chrX 13236942 intron mew - chrX 13237036 intron mew - chrX_8_13235001 chrX_13235001 RAL-382 3895 chrX 13262440 13262470 chrX 13262594 13262624 22 154 10.0 6.0 8.0 2.4 184 chrX 13262440 3` UTR comt + chrX 13262532 intergenic comt +,HDAC4 - chrX 13262624 intergenic HDAC4 -,comt + chrX_22_13260001 chrX_13260001 RAL-382 3896 chrX 13321415 13321466 chrX 13321567 13321590 13 143 8.5 2.5 5.5 2.0 175 chrX 13321415 intron IP3K2 + chrX 13321502 intron IP3K2 + chrX 13321590 intron IP3K2 + chrX_13_13320001 chrX_13320001 RAL-382 3897 chrX 13329263 13329360 chrX 13329411 13329496 12 148 0.0 0.0 0.0 12.0 233 chrX 13329263 3` UTR IP3K2 + chrX 13329380 intergenic IP3K2 +,Jafrac1 + chrX 13329496 intergenic IP3K2 +,Jafrac1 + chrX_12_13325001 chrX_13325001 RAL-382 3898 chrX 13347008 13347040 chrX 13347165 13347197 4 157 0.0 10.5 5.2 0.6 189 chrX 13347008 intergenic not near genes chrX 13347102 intergenic not near genes chrX 13347197 intergenic not near genes chrX_4_13345001 chrX_13345001 RAL-382 3899 chrX 13374795 13374863 chrX 13374925 13374992 26 128 6.5 12.0 9.2 2.5 197 chrX 13374795 intron CG1640 + chrX 13374894 intron CG1640 + chrX 13374992 intron CG1640 + chrX_26_13370001 chrX_13370001 RAL-382 3900 chrX 13401437 13401484 chrX 13401839 13401886 jockey 20 402 8.0 9.0 8.5 2.1 449 chrX 13401437 intergenic CG1673 +,CG12725 - chrX 13401662 intergenic CG12725 -,CG1673 + chrX 13401886 3` UTR CG12725 - chrX_20_13400001 chrX_13400001 RAL-382 3901 chrX 13429410 13429484 chrX 13430609 13430683 jockey 7 1199 0.0 5.5 2.8 1.8 1273 chrX 13429410 intergenic not near genes chrX 13430046 intergenic not near genes chrX 13430683 intergenic not near genes chrX_7_13430001 chrX_13430001 RAL-382 3902 chrX 13463613 13463666 chrX 13469225 13469293 mdg3 30 5626 9.0 8.5 8.8 3.1 5680 chrX 13463613 intron Neto + chrX 13466453 intron Neto + chrX 13469293 intron Neto + chrX_30_13465001 chrX_13465001 RAL-382 3903 chrX 13471370 13471393 chrX 13471503 13471526 8 133 5.5 15.0 10.2 0.7 156 chrX 13471370 intron Neto + chrX 13471448 intron Neto + chrX 13471526 intron Neto + chrX_8_13470001 chrX_13470001 RAL-382 3904 chrX 13497952 13498024 chrX 13498079 13498151 24 127 3.0 6.5 4.8 4.1 199 chrX 13497952 intron Neto + chrX 13498052 intron Neto + chrX 13498151 intron Neto + chrX_24_13495001 chrX_13495001 RAL-382 3905 chrX 13574902 13574934 chrX 13575043 13575063 7 137 6.0 8.0 7.0 0.9 161 chrX 13574902 intron Tango13 + chrX 13574982 intron Tango13 + chrX 13575063 intron Tango13 + chrX_7_13570001 chrX_13570001 RAL-382 3906 chrX 13577704 13577781 chrX 13577989 13578066 15 282 3.5 1.5 2.5 4.3 362 chrX 13577704 intron Tango13 + chrX 13577885 intron Tango13 + chrX 13578066 intron Tango13 + chrX_15_13575001 chrX_13575001 RAL-382 3907 chrX 13875910 13875989 chrX 13876039 13876145 15 137 6.5 1.0 3.8 3.1 235 chrX 13875910 intron mamo - chrX 13876028 intron mamo - chrX 13876145 intron mamo - chrX_15_13875001 chrX_13875001 RAL-382 3908 chrX 13908765 13908767 chrX 13908888 13908895 5 126 9.5 11.0 10.2 0.4 130 chrX 13908765 intron mamo - chrX 13908830 intron mamo - chrX 13908895 intron mamo - chrX_5_13905001 chrX_13905001 RAL-382 3909 chrX 13916665 13916710 chrX 13916792 13916837 12 124 10.0 3.5 6.8 1.5 172 chrX 13916665 intron mamo - chrX 13916751 intron mamo - chrX 13916837 intron mamo - chrX_12_13915001 chrX_13915001 RAL-382 3910 chrX 13937929 13938008 chrX 13941250 13941329 I-element 15 3319 3.5 7.0 5.2 2.4 3400 chrX 13937929 intron mamo - chrX 13939629 intron mamo - chrX 13941329 intron mamo - chrX_15_13935001 chrX_13935001 RAL-382 3911 chrX 14030707 14030782 chrX 14035344 14035382 copia 11 4634 5.0 8.5 6.8 1.4 4675 chrX 14030707 intergenic not near genes chrX 14033044 intergenic not near genes chrX 14035382 intergenic not near genes chrX_11_14030001 chrX_14030001 RAL-382 3912 chrX 14064136 14064165 chrX 14064283 14064312 6 147 0.0 6.0 3.0 1.5 176 chrX 14064136 intergenic not near genes chrX 14064224 intergenic not near genes chrX 14064312 intergenic not near genes chrX_6_14060001 chrX_14060001 RAL-382 3913 chrX 14104985 14105001 chrX 14114186 14114202 roo 5 9201 12.0 5.5 8.8 0.5 9217 chrX 14104985 intergenic not near genes chrX 14109594 intergenic not near genes chrX 14114202 5` UTR CR44657 + chrX_5_14105001 chrX_14105001 RAL-382 3914 chrX 14105005 14105028 chrX 14114176 14114229 roo 8 9190 8.5 5.0 6.8 1.0 9224 chrX 14105005 intergenic not near genes chrX 14109617 intergenic not near genes chrX 14114229 5` UTR CR44657 + chrX_8_14105001 chrX_14105001 RAL-382 3915 chrX 14157550 14157618 chrX 14163257 14163325 297 7 5707 6.5 7.0 6.8 0.9 5775 chrX 14157550 intergenic not near genes chrX 14160438 intergenic not near genes chrX 14163325 intergenic not near genes chrX_7_14160001 chrX_14160001 RAL-382 3916 chrX 14167364 14167431 chrX 14167509 14167576 31 144 7.0 8.0 7.5 3.6 212 chrX 14167364 intergenic not near genes chrX 14167470 intergenic not near genes chrX 14167576 intergenic not near genes chrX_31_14165001 chrX_14165001 RAL-382 3917 chrX 14209415 14209488 chrX 14209556 14209629 26 137 9.5 11.5 10.5 2.3 214 chrX 14209415 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209522 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209629 intron,intron l(1)G0007 +,l(1)G0469 - chrX_26_14205001 chrX_14205001 RAL-382 3918 chrX 14304054 14304059 chrX 14310320 14310325 17.6 5 6266 0.0 6.5 3.2 1.2 6271 chrX 14304054 intergenic not near genes chrX 14307190 intergenic not near genes chrX 14310325 intergenic not near genes chrX_5_14305001 chrX_14305001 RAL-382 3919 chrX 14333272 14333311 chrX 14333369 14333378 14 107 3.0 2.5 2.8 3.7 106 chrX 14333272 intron dpr8 + chrX 14333325 intron dpr8 + chrX 14333378 intron dpr8 + chrX_14_14330001 chrX_14330001 RAL-382 3920 chrX 14333789 14333814 chrX 14333937 14333962 8 148 11.0 9.0 10.0 0.7 173 chrX 14333789 intron dpr8 + chrX 14333876 intron dpr8 + chrX 14333962 intron dpr8 + chrX_8_14330001 chrX_14330001 RAL-382 3921 chrX 14333816 14333848 chrX 14333924 14333996 11 144 6.0 6.5 6.2 1.5 180 chrX 14333816 intron dpr8 + chrX 14333906 intron dpr8 + chrX 14333996 intron dpr8 + chrX_11_14330001 chrX_14330001 RAL-382 3922 chrX 14381363 14381407 chrX 14381567 14381611 15 204 4.5 4.0 4.2 2.9 248 chrX 14381363 intron,3` UTR dpr8 +,betaNACtes4 + chrX 14381487 intron dpr8 + chrX 14381611 intron dpr8 + chrX_15_14380001 chrX_14380001 RAL-382 3923 chrX 14383915 14383944 chrX 14384049 14384070 7 133 6.5 9.0 7.8 0.8 155 chrX 14383915 intron dpr8 + chrX 14383992 intron dpr8 + chrX 14384070 intron dpr8 + chrX_7_14380001 chrX_14380001 RAL-382 3924 chrX 14395053 14395126 chrX 14395202 14395274 16 149 0.5 7.5 4.0 3.2 221 chrX 14395053 intron dpr8 + chrX 14395164 intron dpr8 + chrX 14395274 intron dpr8 + chrX_16_14395001 chrX_14395001 RAL-382 3925 chrX 14404967 14405026 chrX 14405095 14405153 20 126 8.5 4.0 6.2 2.8 186 chrX 14404967 intron dpr8 + chrX 14405060 intron dpr8 + chrX 14405153 intron dpr8 + chrX_20_14405001 chrX_14405001 RAL-382 3926 chrX 14406613 14406629 chrX 14406763 14406768 8 148 0.0 7.5 3.8 1.7 155 chrX 14406613 intron dpr8 + chrX 14406690 intron dpr8 + chrX 14406768 intron dpr8 + chrX_8_14405001 chrX_14405001 RAL-382 3927 chrX 14411222 14411292 chrX 14411350 14411408 29 127 8.0 4.5 6.2 4.0 186 chrX 14411222 intron dpr8 + chrX 14411315 intron dpr8 + chrX 14411408 intron dpr8 + chrX_29_14410001 chrX_14410001 RAL-382 3928 chrX 14416266 14416319 chrX 14421084 14421137 F-element 24 4818 7.0 7.5 7.2 2.9 4871 chrX 14416266 intron dpr8 + chrX 14418702 intron dpr8 + chrX 14421137 intron dpr8 + chrX_24_14415001 chrX_14415001 RAL-382 3929 chrX 14421414 14421478 chrX 14421619 14421676 16 196 6.0 5.0 5.5 2.5 262 chrX 14421414 intron dpr8 + chrX 14421545 intron dpr8 + chrX 14421676 intron dpr8 + chrX_16_14420001 chrX_14420001 RAL-382 3930 chrX 14426115 14426149 chrX 14426241 14426270 11 133 1.5 6.5 4.0 2.2 155 chrX 14426115 intron dpr8 + chrX 14426192 intron dpr8 + chrX 14426270 intron dpr8 + chrX_11_14425001 chrX_14425001 RAL-382 3931 chrX 14484919 14484981 chrX 14485058 14485120 17 138 0.0 5.5 2.8 4.5 201 chrX 14484919 intergenic not near genes chrX 14485020 intergenic not near genes chrX 14485120 intergenic not near genes chrX_17_14485001 chrX_14485001 RAL-382 3932 chrX 14505877 14505934 chrX 14506011 14506051 11 131 6.5 7.5 7.0 1.4 174 chrX 14505877 intergenic not near genes chrX 14505964 intergenic not near genes chrX 14506051 intergenic not near genes chrX_11_14505001 chrX_14505001 RAL-382 3933 chrX 14514084 14514127 chrX 14514388 14514434 17 303 13.5 7.0 10.2 1.5 350 chrX 14514084 intergenic not near genes chrX 14514259 intergenic not near genes chrX 14514434 intergenic not near genes chrX_17_14510001 chrX_14510001 RAL-382 3934 chrX 14597686 14597748 chrX 14597813 14597875 22 127 9.5 7.5 8.5 2.3 189 chrX 14597686 intron CG9413 - chrX 14597780 intron CG9413 - chrX 14597875 intron CG9413 - chrX_22_14595001 chrX_14595001 RAL-382 3935 chrX 14597987 14598004 chrX 14598129 14598146 7 141 11.5 6.0 8.8 0.7 159 chrX 14597987 intron CG9413 - chrX 14598066 intron CG9413 - chrX 14598146 intron CG9413 - chrX_7_14595001 chrX_14595001 RAL-382 3936 chrX 14636433 14636482 chrX 14641924 14641973 I-element 19 5489 6.5 14.0 10.2 1.7 5540 chrX 14636433 intron NetA - chrX 14639203 intron NetA - chrX 14641973 intron NetA - chrX_19_14635001 chrX_14635001 RAL-382 3937 chrX 14767907 14767967 chrX 14768037 14768081 12 128 3.0 0.0 1.5 4.8 174 chrX 14767907 intergenic not near genes chrX 14767994 intergenic not near genes chrX 14768081 intergenic not near genes chrX_12_14765001 chrX_14765001 RAL-382 3938 chrX 14777993 14778048 chrX 14782840 14782895 Doc 25 4847 12.5 15.0 13.8 1.7 4902 chrX 14777993 intergenic CG5347 + chrX 14780444 intergenic not near genes chrX 14782895 intergenic Ag5r2 - chrX_25_14780001 chrX_14780001 RAL-382 3939 chrX 14810161 14810176 chrX 14810288 14810304 9 128 4.5 0.0 2.2 2.8 143 chrX 14810161 intron rut - chrX 14810232 intron rut - chrX 14810304 intron rut - chrX_9_14810001 chrX_14810001 RAL-382 3940 chrX 14813696 14813765 chrX 14813824 14813889 22 125 6.0 9.0 7.5 2.6 193 chrX 14813696 intron rut - chrX 14813792 intron rut - chrX 14813889 intron rut - chrX_22_14810001 chrX_14810001 RAL-382 3941 chrX 14818730 14818790 chrX 14823968 14824044 copia 22 5247 5.5 8.0 6.8 2.8 5314 chrX 14818730 intron rut - chrX 14821387 intron rut - chrX 14824044 intron rut - chrX_22_14820001 chrX_14820001 RAL-382 3942 chrX 14883564 14883628 chrX 14883690 14883754 14 126 5.5 6.0 5.8 2.1 190 chrX 14883564 intron Flo2 + chrX 14883659 intron Flo2 + chrX 14883754 intron Flo2 + chrX_14_14880001 chrX_14880001 RAL-382 3943 chrX 14888920 14888941 chrX 14889056 14889077 8 136 9.0 7.5 8.2 0.9 157 chrX 14888920 intron,intron Flo2 +,CG9514 - chrX 14888998 intron,intron Flo2 +,CG9514 - chrX 14889077 intron,intron Flo2 +,CG9514 - chrX_8_14885001 chrX_14885001 RAL-382 3944 chrX 14888943 14888975 chrX 14889052 14889086 14 132 4.5 6.5 5.5 2.2 143 chrX 14888943 intron,intron Flo2 +,CG9514 - chrX 14889014 intron,intron Flo2 +,CG9514 - chrX 14889086 intron,intron Flo2 +,CG9514 - chrX_14_14885001 chrX_14885001 RAL-382 3945 chrX 14900802 14900878 chrX 14901044 14901120 27 242 6.0 5.5 5.8 4.0 318 chrX 14900802 intron Flo2 + chrX 14900961 intron Flo2 + chrX 14901120 intron Flo2 + chrX_27_14900001 chrX_14900001 RAL-382 3946 chrX 14936823 14936879 chrX 14946130 14946186 roo 30 9307 11.5 9.5 10.5 2.6 9363 chrX 14936823 intron pdgy - chrX 14941504 intron pdgy - chrX 14946186 intron pdgy - chrX_30_14940001 chrX_14940001 RAL-382 3947 chrX 14981707 14981738 chrX 14981836 14981867 12 129 3.5 12.0 7.8 1.4 160 chrX 14981707 intron eag + chrX 14981787 intron eag + chrX 14981867 intron eag + chrX_12_14980001 chrX_14980001 RAL-382 3948 chrX 15059126 15059198 chrX 15059282 15059348 12 155 6.0 3.5 4.8 2.1 222 chrX 15059126 exon hiw - chrX 15059237 intron hiw - chrX 15059348 intron hiw - chrX_12_15055001 chrX_15055001 RAL-382 3949 chrX 15161521 15161565 chrX 15161660 15161704 15 137 10.5 8.0 9.2 1.5 183 chrX 15161521 intron CG9095 - chrX 15161612 intron CG9095 - chrX 15161704 intron CG9095 - chrX_15_15160001 chrX_15160001 RAL-382 3950 chrX 15168690 15168760 chrX 15168829 15168899 22 139 3.5 6.0 4.8 3.8 209 chrX 15168690 intergenic not near genes chrX 15168794 intergenic not near genes chrX 15168899 intergenic not near genes chrX_22_15165001 chrX_15165001 RAL-382 3951 chrX 15217281 15217295 chrX 15217405 15217426 5 131 6.5 12.5 9.5 0.5 145 chrX 15217281 intergenic not near genes chrX 15217354 intergenic not near genes chrX 15217426 intergenic not near genes chrX_5_15215001 chrX_15215001 RAL-382 3952 chrX 15247944 15248239 chrX 15248072 15248365 5 126 12.5 10.5 11.5 0.4 421 chrX 15247944 intergenic not near genes chrX 15248154 intergenic not near genes chrX 15248365 intergenic not near genes chrX_5_15245001 chrX_15245001 RAL-382 3953 chrX 15248249 15248290 chrX 15248375 15248406 4 124 7.5 13.0 10.2 0.4 157 chrX 15248249 intergenic not near genes chrX 15248328 intergenic not near genes chrX 15248406 intergenic not near genes chrX_4_15245001 chrX_15245001 RAL-382 3954 chrX 15268837 15268892 chrX 15268967 15269022 16 123 11.5 10.0 10.8 1.4 185 chrX 15268837 intergenic not near genes chrX 15268930 intergenic not near genes chrX 15269022 intergenic not near genes chrX_16_15265001 chrX_15265001 RAL-382 3955 chrX 15273663 15273711 chrX 15274879 15274928 1360 7 1212 10.0 4.5 7.2 0.9 1265 chrX 15273663 intergenic not near genes chrX 15274296 intergenic not near genes chrX 15274928 intergenic not near genes chrX_7_15270001 chrX_15270001 RAL-382 3956 chrX 15275497 15275515 chrX 15275623 15275641 5 126 5.0 0.5 2.8 1.3 144 chrX 15275497 intergenic not near genes chrX 15275569 intergenic not near genes chrX 15275641 intergenic not near genes chrX_5_15275001 chrX_15275001 RAL-382 3957 chrX 15287563 15287598 chrX 15287698 15287733 7 135 0.5 0.0 0.2 5.8 170 chrX 15287563 intergenic not near genes chrX 15287648 intergenic not near genes chrX 15287733 intergenic not near genes chrX_7_15285001 chrX_15285001 RAL-382 3958 chrX 15326683 15326704 chrX 15326931 15326952 I-element 9 248 3.0 3.5 3.2 2.1 269 chrX 15326683 3` UTR Top1 + chrX 15326818 3` UTR Top1 + chrX 15326952 3` UTR Top1 + chrX_9_15325001 chrX_15325001 RAL-382 3959 chrX 15358258 15358336 chrX 15358396 15358474 31 137 5.5 6.5 6.0 4.4 216 chrX 15358258 intron acj6 - chrX 15358366 intron acj6 - chrX 15358474 intron acj6 - chrX_31_15355001 chrX_15355001 RAL-382 3960 chrX 15369788 15369858 chrX 15369921 15369936 19 130 11.5 6.0 8.8 1.9 148 chrX 15369788 intron acj6 - chrX 15369862 intron acj6 - chrX 15369936 intron acj6 - chrX_19_15365001 chrX_15365001 RAL-382 3961 chrX 15413011 15413036 chrX 15417363 15417388 Juan 5 4352 10.0 14.0 12.0 0.4 4377 chrX 15413011 intron Cngl - chrX 15415200 intron Cngl - chrX 15417388 intron Cngl - chrX_5_15415001 chrX_15415001 RAL-382 3962 chrX 15413039 15413072 chrX 15417361 15417384 Juan 11 4338 5.0 13.5 9.2 1.1 4345 chrX 15413039 intron Cngl - chrX 15415212 intron Cngl - chrX 15417384 intron Cngl - chrX_11_15415001 chrX_15415001 RAL-382 3963 chrX 15426135 15426199 chrX 15426281 15426345 35 146 10.5 8.5 9.5 3.3 210 chrX 15426135 intron Cngl - chrX 15426240 intron Cngl - chrX 15426345 intron Cngl - chrX_35_15425001 chrX_15425001 RAL-382 3964 chrX 15429183 15429258 chrX 15429315 15429390 30 132 6.5 2.0 4.2 5.8 207 chrX 15429183 intron Cngl - chrX 15429286 intron Cngl - chrX 15429390 intron Cngl - chrX_30_15425001 chrX_15425001 RAL-382 3965 chrX 15435693 15435698 chrX 15436148 15436181 rover 4 476 0.0 10.5 5.2 0.6 488 chrX 15435693 intron Cngl - chrX 15435937 intron Cngl - chrX 15436181 intron Cngl - chrX_4_15435001 chrX_15435001 RAL-382 3966 chrX 15455501 15455578 chrX 15455628 15455705 30 127 10.5 9.0 9.8 2.8 204 chrX 15455501 3` UTR CG11655 + chrX 15455603 3` UTR shtd - chrX 15455705 3` UTR shtd - chrX_30_15455001 chrX_15455001 RAL-382 3967 chrX 15519747 15519818 chrX 15519875 15519946 20 126 8.5 5.0 6.8 2.6 199 chrX 15519747 intron Ac13E - chrX 15519846 intron Ac13E - chrX 15519946 exon Ac13E - chrX_20_15515001 chrX_15515001 RAL-382 3968 chrX 15536654 15536701 chrX 15536778 15536823 13 125 11.5 12.5 12.0 1.0 169 chrX 15536654 intron Ac13E - chrX 15536738 intron Ac13E - chrX 15536823 intron Ac13E - chrX_13_15535001 chrX_15535001 RAL-382 3969 chrX 15630430 15630474 chrX 15630571 15630615 12 141 10.0 7.5 8.8 1.2 185 chrX 15630430 intron sog - chrX 15630522 intron sog - chrX 15630615 intron sog - chrX_12_15630001 chrX_15630001 RAL-382 3970 chrX 15633962 15634015 chrX 15634389 15634442 13 424 8.0 4.5 6.2 1.8 480 chrX 15633962 intergenic not near genes chrX 15634202 intergenic not near genes chrX 15634442 intergenic not near genes chrX_13_15630001 chrX_15630001 RAL-382 3971 chrX 15677995 15678067 chrX 15678116 15678194 16 127 6.5 8.0 7.2 2.0 199 chrX 15677995 intergenic CG12708 + chrX 15678094 intergenic CG12708 + chrX 15678194 intergenic CG12708 + chrX_16_15675001 chrX_15675001 RAL-382 3972 chrX 15696617 15696663 chrX 15696811 15696830 8 188 9.0 7.0 8.0 0.9 213 chrX 15696617 intergenic not near genes chrX 15696724 intergenic not near genes chrX 15696830 intergenic not near genes chrX_8_15695001 chrX_15695001 RAL-382 3973 chrX 15934576 15934622 chrX 15934693 15934743 4 117 50.0 56.0 53.0 0.1 167 chrX 15934576 3` UTR Stim - chrX 15934660 3` UTR Stim - chrX 15934743 3` UTR Stim - chrX_4_15930001 chrX_15930001 RAL-382 3974 chrX 16129581 16129591 chrX 16129717 16129727 7 135 0.0 16.5 8.2 0.8 146 chrX 16129581 intron disco-r - chrX 16129654 intron disco-r - chrX 16129727 intron disco-r - chrX_7_16125001 chrX_16125001 RAL-382 3975 chrX 16160247 16160300 chrX 16160373 16160426 8 126 5.5 7.0 6.2 1.1 179 chrX 16160247 intergenic not near genes chrX 16160336 intergenic not near genes chrX 16160426 intergenic not near genes chrX_8_16160001 chrX_16160001 RAL-382 3976 chrX 16171572 16171645 chrX 16171706 16171772 5 130 0.0 4.0 2.0 1.7 200 chrX 16171572 intergenic not near genes chrX 16171672 intergenic not near genes chrX 16171772 intergenic not near genes chrX_5_16170001 chrX_16170001 RAL-382 3977 chrX 16209357 16209433 chrX 16209490 16209569 12 131 4.5 4.5 4.5 2.2 212 chrX 16209357 intergenic not near genes chrX 16209463 intergenic not near genes chrX 16209569 intergenic not near genes chrX_12_16205001 chrX_16205001 RAL-382 3978 chrX 16222742 16222803 chrX 16231140 16231203 roo 20 8399 0.0 12.5 6.2 2.8 8461 chrX 16222742 intergenic not near genes chrX 16226972 intergenic not near genes chrX 16231203 intergenic not near genes chrX_20_16225001 chrX_16225001 RAL-382 3979 chrX 16245902 16245960 chrX 16246059 16246117 INE-1 23 156 8.0 7.0 7.5 2.7 215 chrX 16245902 intergenic not near genes chrX 16246010 intergenic not near genes chrX 16246117 intergenic not near genes chrX_23_16245001 chrX_16245001 RAL-382 3980 chrX 16253824 16253855 chrX 16253961 16253992 11 137 0.0 8.0 4.0 2.2 168 chrX 16253824 intergenic snRNA:U5:14B - chrX 16253908 intergenic snRNA:U5:14B - chrX 16253992 intergenic snRNA:U5:14B - chrX_11_16250001 chrX_16250001 RAL-382 3981 chrX 16295490 16295552 chrX 16295619 16295680 15 131 9.0 0.0 4.5 2.7 190 chrX 16295490 intron CG9911 - chrX 16295585 intron CG9911 - chrX 16295680 intron CG9911 - chrX_15_16295001 chrX_16295001 RAL-382 3982 chrX 16340624 16340666 chrX 16349831 16349873 roo 21 9207 11.5 8.0 9.8 1.9 9249 chrX 16340624 3` UTR Dsp1 + chrX 16345248 intergenic not near genes chrX 16349873 intergenic sl + chrX_21_16345001 chrX_16345001 RAL-382 3983 chrX 16340667 16340691 chrX 16349824 16349898 roo 12 9203 7.5 7.0 7.2 1.5 9231 chrX 16340667 intergenic Dsp1 + chrX 16345282 intergenic not near genes chrX 16349898 intergenic sl + chrX_12_16345001 chrX_16345001 RAL-382 3984 chrX 16404311 16404382 chrX 16404457 16404528 29 144 9.5 16.0 12.8 2.1 217 chrX 16404311 intron CG9981 - chrX 16404420 intron CG9981 - chrX 16404528 5` UTR CG9981 - chrX_29_16400001 chrX_16400001 RAL-382 3985 chrX 16492601 16492659 chrX 16498228 16498286 mdg3 20 5627 9.0 4.5 6.8 2.6 5685 chrX 16492601 intron para - chrX 16495444 intron para - chrX 16498286 exon para - chrX_20_16495001 chrX_16495001 RAL-382 3986 chrX 16511477 16511488 chrX 16511607 16511618 6 129 8.0 11.0 9.5 0.6 141 chrX 16511477 intron para - chrX 16511548 intron para - chrX 16511618 intron para - chrX_6_16510001 chrX_16510001 RAL-382 3987 chrX 16569667 16569676 chrX 16569798 16569811 10 131 17.5 11.0 14.2 0.7 144 chrX 16569667 intron CanA-14F - chrX 16569739 intron CanA-14F - chrX 16569811 intron CanA-14F - chrX_10_16565001 chrX_16565001 RAL-382 3988 chrX 16674708 16674785 chrX 16674871 16674917 29 162 8.0 5.0 6.5 3.9 209 chrX 16674708 intron CG13012 - chrX 16674812 intron CG13012 - chrX 16674917 intron CG13012 - chrX_29_16670001 chrX_16670001 RAL-382 3989 chrX 16681582 16681659 chrX 16681708 16681785 21 126 4.0 6.0 5.0 3.5 203 chrX 16681582 3` UTR,intron sing +,Axs - chrX 16681684 3` UTR,intron sing +,Axs - chrX 16681785 intron Axs - chrX_21_16680001 chrX_16680001 RAL-382 3990 chrX 16690413 16690476 chrX 16690534 16690605 17 114 3.5 6.5 5.0 2.8 192 chrX 16690413 intron Sep4 - chrX 16690509 intron Sep4 - chrX 16690605 intron Sep4 - chrX_17_16690001 chrX_16690001 RAL-382 3991 chrX 16701405 16701413 chrX 16701573 16701581 4 168 2.5 0.0 1.2 1.8 176 chrX 16701405 intron,exon CG4678 +,spheroide - chrX 16701493 intron,intron CG4678 +,spheroide - chrX 16701581 intron,intron CG4678 +,spheroide - chrX_4_16700001 chrX_16700001 RAL-382 3992 chrX 16707957 16707972 chrX 16708141 16708156 7 184 0.0 7.0 3.5 1.6 199 chrX 16707957 intron CG4678 + chrX 16708056 intron CG4678 + chrX 16708156 intron CG4678 + chrX_7_16705001 chrX_16705001 RAL-382 3993 chrX 16764687 16764709 chrX 16764814 16764831 10 126 16.5 0.0 8.2 1.1 144 chrX 16764687 intron if - chrX 16764759 intron if - chrX 16764831 intron if - chrX_10_16760001 chrX_16760001 RAL-382 3994 chrX 16785232 16785293 chrX 16785382 16785446 23 153 8.5 4.0 6.2 3.2 214 chrX 16785232 3` UTR CG9609 - chrX 16785339 3` UTR CG9609 - chrX 16785446 3` UTR CG9609 - chrX_23_16785001 chrX_16785001 RAL-382 3995 chrX 16821187 16821259 chrX 16821317 16821389 17 130 4.5 0.0 2.2 5.3 202 chrX 16821187 intron CG4829 + chrX 16821288 intron CG4829 + chrX 16821389 intron CG4829 + chrX_17_16820001 chrX_16820001 RAL-382 3996 chrX 16833163 16833221 chrX 16833298 16833356 14 132 6.5 6.5 6.5 1.9 193 chrX 16833163 intron CG13004 - chrX 16833260 intron CG13004 - chrX 16833356 intron CG13004 - chrX_14_16830001 chrX_16830001 RAL-382 3997 chrX 16867754 16867774 chrX 16867882 16867902 10 128 6.0 8.0 7.0 1.2 148 chrX 16867754 intron CG13003 - chrX 16867828 intron CG13003 - chrX 16867902 intron CG13003 - chrX_10_16865001 chrX_16865001 RAL-382 3998 chrX 16870031 16870096 chrX 16870163 16870229 15 132 7.0 6.0 6.5 2.0 198 chrX 16870031 intron CG13003 - chrX 16870130 intron CG13003 - chrX 16870229 intron CG13003 - chrX_15_16870001 chrX_16870001 RAL-382 3999 chrX 16873958 16873983 chrX 16874116 16874131 12 158 8.0 6.0 7.0 1.5 173 chrX 16873958 intron CG13003 - chrX 16874044 intron CG13003 - chrX 16874131 intron CG13003 - chrX_12_16870001 chrX_16870001 RAL-382 4000 chrX 16935957 16936031 chrX 16936424 16936466 jockey 11 465 9.5 4.5 7.0 1.4 509 chrX 16935957 intron CG4928 + chrX 16936212 intron CG4928 + chrX 16936466 intron CG4928 + chrX_11_16935001 chrX_16935001 RAL-382 4001 chrX 1053117 1053123 chrX 16983076 16983076 8 15929954 22.5 19.5 21.0 0.4 15929959 chrX 1053117 intron CR44779 + chrX 9018096 intron,intron rdgA +,CR43836 - chrX 16983076 intron CG45002 - chrX_8_9015001 chrX_9015001 RAL-382 4002 chrX 1053118 1053124 chrX 16983077 16983077 4 15929956 22.0 19.0 20.5 0.2 15929959 chrX 1053118 intron CR44779 + chrX 9018098 intron,intron rdgA +,CR43836 - chrX 16983077 intron CG45002 - chrX_4_9015001 chrX_9015001 RAL-382 4003 chrX 17011922 17012000 chrX 17012055 17012062 18 123 5.0 7.0 6.0 2.6 140 chrX 17011922 intron CG45002 - chrX 17011992 intron CG45002 - chrX 17012062 intron CG45002 - chrX_18_17010001 chrX_17010001 RAL-382 4004 chrX 17057892 17057943 chrX 17058183 17058234 pogo 17 291 8.0 11.0 9.5 1.6 342 chrX 17057892 intron CG45002 - chrX 17058063 intron CG45002 - chrX 17058234 intron CG45002 - chrX_17_17055001 chrX_17055001 RAL-382 4005 chrX 17057946 17057957 chrX 17058237 17058248 pogo 5 291 8.0 20.0 14.0 0.3 302 chrX 17057946 intron CG45002 - chrX 17058097 intron CG45002 - chrX 17058248 intron CG45002 - chrX_5_17055001 chrX_17055001 RAL-382 4006 chrX 17063144 17063207 chrX 17063281 17063303 20 135 4.0 12.0 8.0 2.2 159 chrX 17063144 intron CG45002 - chrX 17063224 intron CG45002 - chrX 17063303 intron CG45002 - chrX_20_17060001 chrX_17060001 RAL-382 4007 chrX 17088133 17088201 chrX 17088776 17088844 7 643 5.0 6.0 5.5 1.1 711 chrX 17088133 intergenic CG8945 - chrX 17088488 intergenic not near genes chrX 17088844 intergenic not near genes chrX_7_17085001 chrX_17085001 RAL-382 4008 chrX 17110086 17110328 chrX 17110201 17110500 20 158 0.0 0.0 0.0 20.0 414 chrX 17110086 intron CG5004 + chrX 17110293 intron CG5004 + chrX 17110500 intron CG5004 + chrX_20_17110001 chrX_17110001 RAL-382 4009 chrX 17195183 17195234 chrX 17200302 17200351 flea 16 5131 8.5 7.5 8.0 1.8 5168 chrX 17195183 3` UTR baz + chrX 17197767 3` UTR baz + chrX 17200351 3` UTR baz + chrX_16_17195001 chrX_17195001 RAL-382 4010 chrX 17205804 17205857 chrX 17205944 17205997 19 140 6.0 10.0 8.0 2.1 193 chrX 17205804 intergenic not near genes chrX 17205900 intergenic not near genes chrX 17205997 intergenic CG32564 + chrX_19_17205001 chrX_17205001 RAL-382 4011 chrX 17221792 17221850 chrX 17221928 17221986 22 135 6.0 11.0 8.5 2.3 194 chrX 17221792 intron CG5172 + chrX 17221889 intron CG5172 + chrX 17221986 intron CG5172 + chrX_22_17220001 chrX_17220001 RAL-382 4012 chrX 17229908 17229961 chrX 17230061 17230114 16 152 7.5 7.0 7.2 2.0 206 chrX 17229908 intergenic CG10597 - chrX 17230011 intergenic CG10597 - chrX 17230114 intergenic CG10597 - chrX_16_17230001 chrX_17230001 RAL-382 4013 chrX 17274071 17274080 chrX 17274245 17274247 4 172 16.5 9.5 13.0 0.3 176 chrX 17274071 intron f + chrX 17274159 intron f + chrX 17274247 intron f + chrX_4_17270001 chrX_17270001 RAL-382 4014 chrX 17274094 17274144 chrX 17274238 17274293 14 153 5.5 8.0 6.8 1.8 199 chrX 17274094 intron f + chrX 17274194 intron f + chrX 17274293 intron f + chrX_14_17270001 chrX_17270001 RAL-382 4015 chrX 17275491 17275549 chrX 17275620 17275678 12 123 7.0 6.0 6.5 1.6 187 chrX 17275491 intron f + chrX 17275584 intron f + chrX 17275678 intron f + chrX_12_17275001 chrX_17275001 RAL-382 4016 chrX 17282837 17282892 chrX 17282962 17282965 4 106 3.5 0.5 2.0 1.3 128 chrX 17282837 5` UTR CG5445 + chrX 17282901 intron CG5445 + chrX 17282965 5` UTR CG5445 + chrX_4_17280001 chrX_17280001 RAL-382 4017 chrX 17316330 17316357 chrX 17316464 17316491 17 134 12.5 0.0 6.2 2.4 161 chrX 17316330 intron B-H2 + chrX 17316410 intron B-H2 + chrX 17316491 intron B-H2 + chrX_17_17315001 chrX_17315001 RAL-382 4018 chrX 17352549 17352616 chrX 17352693 17352769 27 149 0.0 7.5 3.8 5.6 220 chrX 17352549 intergenic not near genes chrX 17352659 intergenic not near genes chrX 17352769 intergenic not near genes chrX_27_17350001 chrX_17350001 RAL-382 4019 chrX 17357497 17357518 chrX 17357641 17357662 4 144 8.0 3.0 5.5 0.6 165 chrX 17357497 intergenic not near genes chrX 17357580 intergenic not near genes chrX 17357662 intergenic not near genes chrX_4_17355001 chrX_17355001 RAL-382 4020 chrX 17431314 17431338 chrX 17431705 17431724 jockey 9 389 11.0 4.5 7.8 1.0 410 chrX 17431314 intron CG12994 - chrX 17431519 intron CG12994 - chrX 17431724 intron CG12994 - chrX_9_17430001 chrX_17430001 RAL-382 4021 chrX 17434378 17434447 chrX 17434521 17434589 18 143 5.5 0.0 2.8 4.7 211 chrX 17434378 intron CG12994 - chrX 17434484 intron CG12994 - chrX 17434589 intron CG12994 - chrX_18_17430001 chrX_17430001 RAL-382 4022 chrX 17443075 17443103 chrX 17443249 17443277 13 174 9.5 4.0 6.8 1.7 202 chrX 17443075 intron CG12994 - chrX 17443176 intron CG12994 - chrX 17443277 intron CG12994 - chrX_13_17440001 chrX_17440001 RAL-382 4023 chrX 17479921 17479936 chrX 17480041 17480063 6 126 11.0 14.0 12.5 0.4 142 chrX 17479921 intron CG43658 - chrX 17479992 intron CG43658 - chrX 17480063 intron CG43658 - chrX_6_17475001 chrX_17475001 RAL-382 4024 chrX 17544966 17545031 chrX 17545098 17545163 18 131 5.0 7.0 6.0 2.6 197 chrX 17544966 intron CG43658 - chrX 17545064 intron CG43658 - chrX 17545163 intron CG43658 - chrX_18_17545001 chrX_17545001 RAL-382 4025 chrX 17549889 17549964 chrX 17550434 17550507 18 543 6.0 7.0 6.5 2.4 618 chrX 17549889 intron CG43658 - chrX 17550198 intron CG43658 - chrX 17550507 intron CG43658 - chrX_18_17550001 chrX_17550001 RAL-382 4026 chrX 17680875 17680901 chrX 17681002 17681028 8 127 10.0 7.0 8.5 0.8 153 chrX 17680875 intron chas - chrX 17680952 intron chas - chrX 17681028 intron chas - chrX_8_17680001 chrX_17680001 RAL-382 4027 chrX 17680905 17680916 chrX 17680996 17681043 6 113 8.5 7.0 7.8 0.7 138 chrX 17680905 intron chas - chrX 17680974 intron chas - chrX 17681043 intron chas - chrX_6_17680001 chrX_17680001 RAL-382 4028 chrX 17726423 17726460 chrX 17726542 17726589 8 126 3.0 6.0 4.5 1.5 166 chrX 17726423 intron CG42684 + chrX 17726506 intron CG42684 + chrX 17726589 intron CG42684 + chrX_8_17725001 chrX_17725001 RAL-382 4029 chrX 17741289 17741364 chrX 17741483 17741560 19 196 1.5 4.5 3.0 4.8 271 chrX 17741289 intron CG42684 + chrX 17741424 intron CG42684 + chrX 17741560 intron CG42684 + chrX_19_17740001 chrX_17740001 RAL-382 4030 chrX 17759626 17759659 chrX 17759755 17759788 5 129 8.5 8.5 8.5 0.5 162 chrX 17759626 intergenic not near genes chrX 17759707 intergenic not near genes chrX 17759788 intergenic not near genes chrX_5_17755001 chrX_17755001 RAL-382 4031 chrX 17782188 17782242 chrX 17782336 17782390 18 147 6.5 9.0 7.8 2.0 202 chrX 17782188 intergenic not near genes chrX 17782289 intergenic not near genes chrX 17782390 intergenic not near genes chrX_18_17780001 chrX_17780001 RAL-382 4032 chrX 17792934 17792971 chrX 17796259 17796317 flea 10 3338 6.0 4.0 5.0 1.7 3383 chrX 17792934 intron OdsH + chrX 17794626 intron OdsH + chrX 17796317 intron OdsH + chrX_10_17790001 chrX_17790001 RAL-382 4033 chrX 17879605 17879653 chrX 17879761 17879809 17 151 12.5 9.0 10.8 1.4 204 chrX 17879605 intron mnb - chrX 17879707 intron mnb - chrX 17879809 intron mnb - chrX_17_17875001 chrX_17875001 RAL-382 4034 chrX 17879654 17879679 chrX 17879759 17879835 8 138 7.0 9.0 8.0 0.9 181 chrX 17879654 intron mnb - chrX 17879744 intron mnb - chrX 17879835 intron mnb - chrX_8_17875001 chrX_17875001 RAL-382 4035 chrX 17968854 17968918 chrX 17969023 17969085 18 168 8.0 9.0 8.5 1.9 231 chrX 17968854 intron Sh - chrX 17968970 intron Sh - chrX 17969085 intron Sh - chrX_18_17965001 chrX_17965001 RAL-382 4036 chrX 14180201 14180201 chrX 18110357 18110357 4 3930156 9.0 24.0 16.5 0.2 3930156 chrX 14180201 intergenic not near genes chrX 16145279 intron disco-r - chrX 18110357 intron wupA - chrX_4_16145001 chrX_16145001 RAL-382 4037 chrX 18122777 18122787 chrX 18122903 18122912 4 126 13.5 8.5 11.0 0.3 135 chrX 18122777 5` UTR CR45606 + chrX 18122844 5` UTR CR45606 + chrX 18122912 5` UTR CR45606 + chrX_4_18120001 chrX_18120001 RAL-382 4038 chrX 18122789 18122849 chrX 18122900 18122975 17 124 8.0 8.0 8.0 1.9 186 chrX 18122789 5` UTR CR45606 + chrX 18122882 5` UTR CR45606 + chrX 18122975 intergenic CR45606 + chrX_17_18120001 chrX_18120001 RAL-382 4039 chrX 18126779 18126831 chrX 18126906 18126958 14 125 5.0 8.0 6.5 1.9 179 chrX 18126779 intron CG32553 - chrX 18126868 5` UTR CG32553 - chrX 18126958 5` UTR CG32553 - chrX_14_18125001 chrX_18125001 RAL-382 4040 chrX 18148591 18148625 chrX 18148744 18148778 20 153 9.5 4.0 6.8 2.6 187 chrX 18148591 intergenic not near genes chrX 18148684 intergenic not near genes chrX 18148778 intergenic not near genes chrX_20_18145001 chrX_18145001 RAL-382 4041 chrX 18194025 18194095 chrX 18194610 18194680 BS 30 584 13.5 10.5 12.0 2.3 655 chrX 18194025 intron Frq2 + chrX 18194352 intron Frq2 + chrX 18194680 intron Frq2 + chrX_30_18190001 chrX_18190001 RAL-382 4042 chrX 18256439 18256444 chrX 18256601 18256606 5 162 13.0 0.0 6.5 0.7 167 chrX 18256439 intergenic CR45613 - chrX 18256522 intergenic CR45613 - chrX 18256606 intergenic CR45613 - chrX_5_18255001 chrX_18255001 RAL-382 4043 chrX 18281526 18281575 chrX 18281635 18281647 20 119 7.5 8.0 7.8 2.3 121 chrX 18281526 intron upd3 + chrX 18281586 intron upd3 + chrX 18281647 intron upd3 + chrX_20_18280001 chrX_18280001 RAL-382 4044 chrX 18320428 18320500 chrX 18320622 18320682 17 190 0.0 4.5 2.2 5.3 254 chrX 18320428 intron CG6023 - chrX 18320555 intron CG6023 - chrX 18320682 intron CG6023 - chrX_17_18320001 chrX_18320001 RAL-382 4045 chrX 18337376 18337451 chrX 18337526 18337566 22 147 7.5 6.0 6.8 2.8 190 chrX 18337376 intron CG6123 - chrX 18337471 intron CG6123 - chrX 18337566 intron CG6123 - chrX_22_18335001 chrX_18335001 RAL-382 4046 chrX 18362931 18362946 chrX 18363058 18363073 8 127 0.0 4.5 2.2 2.5 142 chrX 18362931 intergenic CG6106 + chrX 18363002 intergenic CG6106 + chrX 18363073 intergenic not near genes chrX_8_18360001 chrX_18360001 RAL-382 4047 chrX 18367570 18367634 chrX 18367842 18367922 31 287 9.0 4.0 6.5 4.1 352 chrX 18367570 intron CrebB + chrX 18367746 intron CrebB + chrX 18367922 intron CrebB + chrX_31_18365001 chrX_18365001 RAL-382 4048 chrX 18407858 18407915 chrX 18407994 18408051 32 134 11.5 4.0 7.8 3.6 193 chrX 18407858 exon CG32549 - chrX 18407954 intron CG32549 - chrX 18408051 intron CG32549 - chrX_32_18405001 chrX_18405001 RAL-382 4049 chrX 18427343 18427408 chrX 18427793 18427869 25 460 7.5 7.0 7.2 3.0 526 chrX 18427343 intergenic CG42323 + chrX 18427606 intergenic not near genes chrX 18427869 intergenic not near genes chrX_25_18425001 chrX_18425001 RAL-382 4050 chrX 18429451 18429521 chrX 18434812 18434882 Transpac 30 5361 10.5 8.5 9.5 2.9 5431 chrX 18429451 intergenic not near genes chrX 18432166 intergenic not near genes chrX 18434882 intergenic not near genes chrX_30_18430001 chrX_18430001 RAL-382 4051 chrX 18453595 18453616 chrX 18453686 18453742 13 118 11.5 13.0 12.2 1.0 147 chrX 18453595 intron CG32547 - chrX 18453668 intron CG32547 - chrX 18453742 intron CG32547 - chrX_13_18450001 chrX_18450001 RAL-382 4052 chrX 18486070 18486136 chrX 18486209 18486265 13 137 5.5 8.5 7.0 1.6 195 chrX 18486070 exon psh - chrX 18486168 intron psh - chrX 18486265 intron psh - chrX_13_18485001 chrX_18485001 RAL-382 4053 chrX 18558728 18558804 chrX 18558860 18558935 26 131 3.5 6.5 5.0 4.3 207 chrX 18558728 intron Bx + chrX 18558832 intron Bx + chrX 18558935 intron Bx + chrX_26_18555001 chrX_18555001 RAL-382 4054 chrX 12946234 12946235 chrX 18572524 18572527 9 5626290 31.5 44.0 37.8 0.2 5626293 chrX 12946234 3` UTR fne + chrX 15759380 intron Graf - chrX 18572527 intergenic not near genes chrX_9_15755001 chrX_15755001 RAL-382 4055 chrX 18644979 18645039 chrX 18645127 18645187 23 148 6.5 9.5 8.0 2.6 208 chrX 18644979 intron Rip11 - chrX 18645083 intron Rip11 - chrX 18645187 intron Rip11 - chrX_23_18645001 chrX_18645001 RAL-382 4056 chrX 18698802 18698876 chrX 18698969 18699043 24 166 4.0 6.0 5.0 4.0 241 chrX 18698802 intergenic not near genes chrX 18698922 intergenic not near genes chrX 18699043 intergenic not near genes chrX_24_18695001 chrX_18695001 RAL-382 4057 chrX 18818578 18818649 chrX 18818715 18818787 7 138 8.0 0.0 4.0 1.4 209 chrX 18818578 intron CG42450 + chrX 18818682 intron CG42450 + chrX 18818787 intron CG42450 + chrX_7_18815001 chrX_18815001 RAL-382 4058 chrX 18896472 18896540 chrX 18896633 18896701 26 161 9.0 3.5 6.2 3.6 229 chrX 18896472 3` UTR CG7349 + chrX 18896586 intergenic CG7349 + chrX 18896701 intergenic CG7349 + chrX_26_18895001 chrX_18895001 RAL-382 4059 chrX 18957028 18957095 chrX 18965736 18965774 roo 31 8709 11.0 6.0 8.5 3.3 8746 chrX 18957028 intron CG43759 + chrX 18961401 intron CG43759 + chrX 18965774 intron CG43759 + chrX_31_18960001 chrX_18960001 RAL-382 4060 chrX 19036391 19036396 chrX 19036517 19036522 7 126 9.0 0.0 4.5 1.3 131 chrX 19036391 intergenic not near genes chrX 19036456 intergenic not near genes chrX 19036522 intergenic not near genes chrX_7_19035001 chrX_19035001 RAL-382 4061 chrX 19060364 19060421 chrX 19065198 19065255 Doc 23 4834 11.0 10.5 10.8 1.9 4891 chrX 19060364 intron CG14190 + chrX 19062810 intron CG14190 + chrX 19065255 intron CG14190 + chrX_23_19060001 chrX_19060001 RAL-382 4062 chrX 19073638 19073696 chrX 19073775 19073833 25 136 3.5 10.5 7.0 3.1 195 chrX 19073638 intergenic not near genes chrX 19073736 intergenic not near genes chrX 19073833 intergenic not near genes chrX_25_19070001 chrX_19070001 RAL-382 4063 chrX 19084042 19084122 chrX 19084212 19084272 6 163 4.0 0.0 2.0 2.0 230 chrX 19084042 intergenic CR45503 + chrX 19084157 intergenic CR45503 + chrX 19084272 intergenic CR45503 + chrX_6_19080001 chrX_19080001 RAL-382 4064 chrX 19094998 19095032 chrX 19095157 19095176 9 155 2.0 12.0 7.0 1.1 178 chrX 19094998 intergenic not near genes chrX 19095087 intergenic not near genes chrX 19095176 intergenic not near genes chrX_9_19095001 chrX_19095001 RAL-382 4065 chrX 19099609 19099679 chrX 19099742 19099812 27 128 3.5 5.5 4.5 4.9 203 chrX 19099609 intergenic not near genes chrX 19099710 intergenic not near genes chrX 19099812 intergenic not near genes chrX_27_19095001 chrX_19095001 RAL-382 4066 chrX 19110209 19110266 chrX 19110679 19110732 8 464 3.0 2.0 2.5 2.3 523 chrX 19110209 intergenic not near genes chrX 19110470 intergenic not near genes chrX 19110732 intergenic not near genes chrX_8_19110001 chrX_19110001 RAL-382 4067 chrX 19124387 19124464 chrX 19124525 19124603 13 138 5.5 5.0 5.2 2.1 216 chrX 19124387 5` UTR CG15882 - chrX 19124495 intergenic CG15882 - chrX 19124603 intergenic CG15882 -,tgy - chrX_13_19120001 chrX_19120001 RAL-382 4068 chrX 19131920 19131969 chrX 19132052 19132071 11 129 11.0 4.5 7.8 1.2 151 chrX 19131920 intergenic not near genes chrX 19131996 intergenic not near genes chrX 19132071 intergenic not near genes chrX_11_19130001 chrX_19130001 RAL-382 4069 chrX 19131972 19131984 chrX 19132050 19132117 5 115 6.0 4.0 5.0 0.8 145 chrX 19131972 intergenic not near genes chrX 19132044 intergenic not near genes chrX 19132117 intergenic not near genes chrX_5_19130001 chrX_19130001 RAL-382 4070 chrX 19136507 19136581 chrX 19143477 19143535 412 23 6967 6.0 5.0 5.5 3.5 7028 chrX 19136507 intergenic not near genes chrX 19140021 intergenic not near genes chrX 19143535 3` UTR RhoGAP18B - chrX_23_19140001 chrX_19140001 RAL-382 4071 chrX 19320178 19320248 chrX 19320316 19320350 22 131 7.0 5.5 6.2 3.1 172 chrX 19320178 intron out - chrX 19320264 intron out - chrX 19320350 intron out - chrX_22_19320001 chrX_19320001 RAL-382 4072 chrX 19330421 19330433 chrX 19330591 19330603 6 170 18.5 7.0 12.8 0.4 182 chrX 19330421 intron nAChRalpha7 - chrX 19330512 intron nAChRalpha7 - chrX 19330603 intron nAChRalpha7 - chrX_6_19330001 chrX_19330001 RAL-382 4073 chrX 19356950 19357019 chrX 19358441 19358528 NOF 19 1504 5.5 0.0 2.8 5.0 1578 chrX 19356950 intron kek5 + chrX 19357739 intron kek5 + chrX 19358528 intron kek5 + chrX_19_19355001 chrX_19355001 RAL-382 4074 chrX 19380114 19380173 chrX 19380405 19380464 pogo 20 291 11.0 10.5 10.8 1.7 350 chrX 19380114 intron kek5 + chrX 19380289 intron kek5 + chrX 19380464 intron kek5 + chrX_20_19380001 chrX_19380001 RAL-382 4075 chrX 19404594 19404599 chrX 19404742 19404747 4 148 17.5 0.0 8.8 0.4 153 chrX 19404594 intron kek5 + chrX 19404670 intron kek5 + chrX 19404747 intron kek5 + chrX_4_19400001 chrX_19400001 RAL-382 4076 chrX 16983076 16983076 chrX 19404963 19404965 4 2421887 21.5 15.5 18.5 0.2 2421889 chrX 16983076 intron CG45002 - chrX 18194020 intron Frq2 + chrX 19404965 intron kek5 + chrX_4_18190001 chrX_18190001 RAL-382 4077 chrX 19437232 19437261 chrX 19444801 19444809 Idefix 9 7565 8.0 6.5 7.2 1.1 7577 chrX 19437232 intron kek5 + chrX 19441020 intron kek5 + chrX 19444809 intron kek5 + chrX_9_19440001 chrX_19440001 RAL-382 4078 chrX 19472082 19472108 chrX 19472702 19472728 jockey 8 620 14.0 8.5 11.2 0.7 646 chrX 19472082 intergenic kek5 + chrX 19472405 intergenic kek5 + chrX 19472728 intergenic not near genes chrX_8_19470001 chrX_19470001 RAL-382 4079 chrX 19472115 19472148 chrX 19472695 19472767 jockey 16 608 7.0 7.0 7.0 2.0 652 chrX 19472115 intergenic kek5 + chrX 19472441 intergenic not near genes chrX 19472767 intergenic not near genes chrX_16_19470001 chrX_19470001 RAL-382 4080 chrX 19500513 19500740 chrX 19500639 19500877 49 131 3.0 4.5 3.8 10.2 364 chrX 19500513 intron,intron CG14200 +,Pfrx + chrX 19500695 intron,intron CG14200 +,Pfrx + chrX 19500877 intron,intron CG14200 +,Pfrx + chrX_49_19500001 chrX_19500001 RAL-382 4081 chrX 19541375 19541439 chrX 19541503 19541569 28 130 7.5 9.0 8.2 3.0 194 chrX 19541375 intron CG32532 - chrX 19541472 intron CG32532 - chrX 19541569 intron CG32532 - chrX_28_19540001 chrX_19540001 RAL-382 4082 chrX 19593904 19593915 chrX 19594039 19594050 5 135 19.0 3.0 11.0 0.4 146 chrX 19593904 exon CG14205 + chrX 19593977 exon CG14205 + chrX 19594050 intron CG14205 + chrX_5_19590001 chrX_19590001 RAL-382 4083 chrX 19593917 19593976 chrX 19594037 19594111 14 133 7.0 2.5 4.8 2.4 194 chrX 19593917 exon CG14205 + chrX 19594014 intron CG14205 + chrX 19594111 exon CG14205 + chrX_14_19590001 chrX_19590001 RAL-382 4084 chrX 19595681 19595743 chrX 19595820 19595882 26 139 8.0 0.0 4.0 5.2 201 chrX 19595681 intergenic CG14205 + chrX 19595782 intergenic CG14205 + chrX 19595882 intergenic CG14205 + chrX_26_19595001 chrX_19595001 RAL-382 4085 chrX 19689371 19689435 chrX 19689499 19689563 34 126 8.5 8.5 8.5 3.6 192 chrX 19689371 intergenic Mer -,CG14227 - chrX 19689467 intergenic Mer - chrX 19689563 intergenic Mer - chrX_34_19685001 chrX_19685001 RAL-382 4086 chrX 19762542 19762570 chrX 19762672 19762700 10 130 20.5 10.0 15.2 0.6 158 chrX 19762542 5` UTR CG12702 - chrX 19762621 5` UTR CG12702 - chrX 19762700 5` UTR CG12702 - chrX_10_19760001 chrX_19760001 RAL-382 4087 chrX 19797315 19797322 chrX 19804678 19804685 Stalker4 4 7363 14.0 7.0 10.5 0.3 7370 chrX 19797315 intergenic not near genes chrX 19801000 intergenic not near genes chrX 19804685 intergenic not near genes chrX_4_19800001 chrX_19800001 RAL-382 4088 chrX 19881413 19881481 chrX 19881544 19881610 35 129 5.5 11.0 8.2 3.8 197 chrX 19881413 intron Hers + chrX 19881512 intron Hers + chrX 19881610 intron Hers + chrX_35_19880001 chrX_19880001 RAL-382 4089 chrX 19884085 19884118 chrX 19884162 19884192 10 108 7.5 4.0 5.8 1.5 107 chrX 19884085 intron Hers + chrX 19884138 intron Hers + chrX 19884192 intron Hers + chrX_10_19880001 chrX_19880001 RAL-382 4090 chrX 19897345 19897410 chrX 19897472 19897537 21 126 8.0 9.0 8.5 2.2 192 chrX 19897345 intron Hers + chrX 19897441 intron Hers + chrX 19897537 intron Hers + chrX_21_19895001 chrX_19895001 RAL-382 4091 chrX 19971772 19971825 chrX 19971899 19971952 13 126 8.5 9.5 9.0 1.3 180 chrX 19971772 intergenic not near genes chrX 19971862 intergenic not near genes chrX 19971952 intergenic not near genes chrX_13_19970001 chrX_19970001 RAL-382 4092 chrX 19983379 19983400 chrX 19983514 19983535 6 135 4.0 0.0 2.0 2.0 156 chrX 19983379 intergenic not near genes chrX 19983457 intergenic not near genes chrX 19983535 intergenic not near genes chrX_6_19980001 chrX_19980001 RAL-382 4093 chrX 19993420 19993445 chrX 19993550 19993575 12 129 11.5 6.0 8.8 1.2 155 chrX 19993420 intergenic not near genes chrX 19993498 intergenic not near genes chrX 19993575 intergenic not near genes chrX_12_19990001 chrX_19990001 RAL-382 4094 chrX 20041480 20041559 chrX 20041610 20041689 25 130 3.5 9.0 6.2 3.5 209 chrX 20041480 intron Dop2R - chrX 20041584 intron Dop2R - chrX 20041689 intron Dop2R - chrX_25_20040001 chrX_20040001 RAL-382 4095 chrX 20057076 20057155 chrX 20057214 20057219 6 125 3.0 5.5 4.2 1.2 143 chrX 20057076 intron Dop2R - chrX 20057148 intron Dop2R - chrX 20057219 intron Dop2R - chrX_6_20055001 chrX_20055001 RAL-382 4096 chrX 20125345 20125394 chrX 20125477 20125526 21 132 7.5 14.0 10.8 1.8 181 chrX 20125345 intergenic CG34331 + chrX 20125436 intergenic CG34331 + chrX 20125526 intergenic CG34331 + chrX_21_20125001 chrX_20125001 RAL-382 4097 chrX 20132262 20132307 chrX 20132395 20132440 13 131 10.5 4.5 7.5 1.5 178 chrX 20132262 intergenic not near genes chrX 20132351 intergenic not near genes chrX 20132440 intergenic not near genes chrX_13_20130001 chrX_20130001 RAL-382 4098 chrX 20150374 20150395 chrX 20150513 20150534 4 139 0.5 7.5 4.0 0.8 160 chrX 20150374 intron CG9572 + chrX 20150454 intron CG9572 + chrX 20150534 intron CG9572 + chrX_4_20150001 chrX_20150001 RAL-382 4099 chrX 20263377 20263438 chrX 20263517 20263553 12 130 6.0 4.5 5.2 1.9 176 chrX 20263377 intergenic not near genes chrX 20263465 intergenic not near genes chrX 20263553 intergenic not near genes chrX_12_20260001 chrX_20260001 RAL-382 4100 chrX 20271452 20271528 chrX 20271594 20271665 11 141 6.5 0.0 3.2 2.6 213 chrX 20271452 intergenic not near genes chrX 20271558 intergenic not near genes chrX 20271665 intergenic not near genes chrX_11_20270001 chrX_20270001 RAL-382 4101 chrX 20312840 20312910 chrX 20312968 20313038 35 127 11.0 11.0 11.0 2.9 198 chrX 20312840 intron CG1504 - chrX 20312939 intron CG1504 - chrX 20313038 intron CG1504 - chrX_35_20310001 chrX_20310001 RAL-382 4102 chrX 20320250 20320305 chrX 20320377 20320432 15 127 6.5 3.0 4.8 2.6 182 chrX 20320250 intron CG1504 - chrX 20320341 intron CG1504 - chrX 20320432 intron CG1504 - chrX_15_20320001 chrX_20320001 RAL-382 4103 chrX 20369271 20369341 chrX 20369405 20369475 27 134 3.0 6.0 4.5 4.9 204 chrX 20369271 intergenic not near genes chrX 20369373 intergenic not near genes chrX 20369475 intergenic not near genes chrX_27_20365001 chrX_20365001 RAL-382 4104 chrX 20377273 20377335 chrX 20378790 20378852 hobo 5 1517 7.0 9.0 8.0 0.6 1579 chrX 20377273 intergenic not near genes chrX 20378062 intergenic not near genes chrX 20378852 intergenic not near genes chrX_5_20375001 chrX_20375001 RAL-382 4105 chrX 20383765 20383772 chrX 20383901 20383922 4 147 16.0 5.0 10.5 0.3 157 chrX 20383765 intergenic not near genes chrX 20383844 intergenic not near genes chrX 20383922 intergenic not near genes chrX_4_20380001 chrX_20380001 RAL-382 4106 chrX 20383775 20383822 chrX 20383898 20383936 13 141 7.0 4.5 5.8 1.9 161 chrX 20383775 intergenic not near genes chrX 20383856 intergenic not near genes chrX 20383936 intergenic not near genes chrX_13_20380001 chrX_20380001 RAL-382 4107 chrX 20384212 20384282 chrX 20384345 20384415 15 129 5.5 6.0 5.8 2.2 203 chrX 20384212 intergenic not near genes chrX 20384314 intergenic not near genes chrX 20384415 intergenic not near genes chrX_15_20380001 chrX_20380001 RAL-382 4108 chrX 20426189 20426216 chrX 20428348 20428405 8 2174 35.5 31.5 33.5 0.2 2216 chrX 20426189 exon cactin + chrX 20427297 intergenic CG11710 -,CG15456 - chrX 20428405 exon CG11710 - chrX_8_20425001 chrX_20425001 RAL-382 4109 chrX 20443160 20443202 chrX 20443286 20443328 16 125 7.5 16.0 11.8 1.2 168 chrX 20443160 exon CG1695 + chrX 20443244 intron CG1695 + chrX 20443328 intron CG1695 + chrX_16_20440001 chrX_20440001 RAL-382 4110 chrX 20448387 20448449 chrX 20448521 20448578 13 134 17.0 5.5 11.2 1.1 191 chrX 20448387 intergenic not near genes chrX 20448482 intergenic not near genes chrX 20448578 intergenic not near genes chrX_13_20445001 chrX_20445001 RAL-382 4111 chrX 20467969 20468037 chrX 20468108 20468169 19 138 11.5 0.0 5.8 2.8 200 chrX 20467969 intron GstT3 + chrX 20468069 intron GstT3 + chrX 20468169 intron GstT3 + chrX_19_20465001 chrX_20465001 RAL-382 4112 chrX 20476912 20476976 chrX 20477052 20477116 33 138 11.0 3.0 7.0 4.1 204 chrX 20476912 intron RhoGAP19D - chrX 20477014 intron RhoGAP19D - chrX 20477116 intron RhoGAP19D - chrX_33_20475001 chrX_20475001 RAL-382 4113 chrX 20493875 20493930 chrX 20494084 20494141 20 210 0.0 9.5 4.8 3.4 266 chrX 20493875 intron RhoGAP19D - chrX 20494008 intron RhoGAP19D - chrX 20494141 intron RhoGAP19D - chrX_20_20490001 chrX_20490001 RAL-382 4114 chrX 20518736 20518799 chrX 20518865 20518928 29 127 6.5 6.5 6.5 3.9 192 chrX 20518736 intron Tak1 - chrX 20518832 intron Tak1 - chrX 20518928 intron Tak1 - chrX_29_20515001 chrX_20515001 RAL-382 4115 chrX 20531646 20531683 chrX 20531786 20531823 18 139 7.0 9.5 8.2 2.0 177 chrX 20531646 intergenic not near genes chrX 20531734 intergenic not near genes chrX 20531823 intergenic not near genes chrX_18_20530001 chrX_20530001 RAL-382 4116 chrX 20546506 20546546 chrX 20546722 20546762 9 216 6.5 8.5 7.5 1.1 256 chrX 20546506 intron RunxB + chrX 20546634 intron RunxB + chrX 20546762 intron RunxB + chrX_9_20545001 chrX_20545001 RAL-382 4117 chrX 20570719 20570792 chrX 20570854 20570927 24 134 6.0 7.5 6.8 3.1 208 chrX 20570719 intergenic not near genes chrX 20570823 intergenic not near genes chrX 20570927 intergenic not near genes chrX_24_20570001 chrX_20570001 RAL-382 4118 chrX 20578030 20578107 chrX 20578159 20578236 19 127 5.0 8.5 6.8 2.4 206 chrX 20578030 intergenic not near genes chrX 20578133 intergenic not near genes chrX 20578236 intergenic not near genes chrX_19_20575001 chrX_20575001 RAL-382 4119 chrX 20615099 20615106 chrX 20615234 20615241 4 135 3.5 0.0 1.8 1.4 142 chrX 20615099 intron RunxA - chrX 20615170 intron RunxA - chrX 20615241 intron RunxA - chrX_4_20615001 chrX_20615001 RAL-382 4120 chrX 20635386 20635447 chrX 20635602 20635663 18 215 0.5 6.0 3.2 4.3 277 chrX 20635386 intergenic not near genes chrX 20635524 intergenic not near genes chrX 20635663 intergenic not near genes chrX_18_20635001 chrX_20635001 RAL-382 4121 chrX 20708348 20708385 chrX 20708467 20708500 7 121 9.5 10.0 9.8 0.6 152 chrX 20708348 intergenic not near genes chrX 20708424 intergenic not near genes chrX 20708500 intergenic not near genes chrX_7_20705001 chrX_20705001 RAL-382 4122 chrX 20710412 20710425 chrX 20710539 20710552 6 127 6.0 1.5 3.8 1.2 140 chrX 20710412 intergenic not near genes chrX 20710482 intergenic not near genes chrX 20710552 intergenic not near genes chrX_6_20710001 chrX_20710001 RAL-382 4123 chrX 20726099 20726167 chrX 20726243 20726296 17 131 7.0 6.5 6.8 2.2 197 chrX 20726099 intergenic not near genes chrX 20726198 intergenic not near genes chrX 20726296 intergenic not near genes chrX_17_20725001 chrX_20725001 RAL-382 4124 chrX 20741117 20741131 chrX 20741249 20741263 9 132 0.0 3.0 1.5 3.6 146 chrX 20741117 intergenic not near genes chrX 20741190 intergenic not near genes chrX 20741263 intergenic not near genes chrX_9_20740001 chrX_20740001 RAL-382 4125 chrX 20810675 20810745 chrX 20810803 20810863 9 127 6.0 6.5 6.2 1.2 188 chrX 20810675 intron shakB - chrX 20810769 intron shakB - chrX 20810863 intron shakB - chrX_9_20810001 chrX_20810001 RAL-382 4126 chrX 20836008 20836069 chrX 20836136 20836207 21 133 5.0 5.5 5.2 3.4 199 chrX 20836008 intron shakB - chrX 20836108 intron shakB - chrX 20836207 intron shakB - chrX_21_20835001 chrX_20835001 RAL-382 4127 chrX 20836688 20836754 chrX 20844340 20844390 roo 22 7651 5.5 5.5 5.5 3.4 7702 chrX 20836688 intron shakB - chrX 20840539 intron shakB - chrX 20844390 intron shakB - chrX_22_20840001 chrX_20840001 RAL-382 4128 chrX 20890488 20890535 chrX 20890623 20890670 16 135 10.5 6.5 8.5 1.7 182 chrX 20890488 intron shakB - chrX 20890579 intron shakB - chrX 20890670 intron shakB - chrX_16_20890001 chrX_20890001 RAL-382 4129 chrX 20911870 20911917 chrX 20911996 20912030 13 122 8.5 8.0 8.2 1.4 160 chrX 20911870 intron shakB - chrX 20911950 intron shakB - chrX 20912030 intron shakB - chrX_13_20910001 chrX_20910001 RAL-382 4130 chrX 20940684 20940721 chrX 20942203 20942230 hobo 14 1516 8.0 3.5 5.8 2.1 1546 chrX 20940684 intergenic not near genes chrX 20941457 intergenic not near genes chrX 20942230 intergenic not near genes chrX_14_20940001 chrX_20940001 RAL-382 4131 chrX 20956922 20957009 chrX 20962416 20962501 I-element 14 5494 1.0 11.0 6.0 2.0 5579 chrX 20956922 intergenic not near genes chrX 20959712 intergenic not near genes chrX 20962501 intergenic Ser6 - chrX_14_20955001 chrX_20955001 RAL-382 4132 chrX 20974147 20974206 chrX 20974381 20974440 16 233 6.0 4.5 5.2 2.6 293 chrX 20974147 intergenic not near genes chrX 20974294 intergenic not near genes chrX 20974440 intergenic not near genes chrX_16_20970001 chrX_20970001 RAL-382 4133 chrX 21008607 21008691 chrX 21008746 21008829 28 138 6.0 2.5 4.2 5.4 222 chrX 21008607 intergenic not near genes chrX 21008718 intergenic not near genes chrX 21008829 intergenic not near genes chrX_28_21005001 chrX_21005001 RAL-382 4134 chrX 21020054 21020080 chrX 21020197 21020223 10 143 10.0 0.0 5.0 1.7 169 chrX 21020054 intergenic not near genes chrX 21020138 intergenic not near genes chrX 21020223 intergenic not near genes chrX_10_21020001 chrX_21020001 RAL-382 4135 chrX 21022300 21022322 chrX 21022519 21022541 10 219 0.0 18.5 9.2 1.0 241 chrX 21022300 intergenic not near genes chrX 21022420 intergenic not near genes chrX 21022541 intergenic not near genes chrX_10_21020001 chrX_21020001 RAL-382 4136 chrX 21028452 21028487 chrX 21028579 21028582 6 117 9.0 4.5 6.8 0.8 130 chrX 21028452 intergenic CG1532 -,CG1529 - chrX 21028517 intergenic CG1529 -,CG1532 - chrX 21028582 intergenic CG1529 -,CG1532 - chrX_6_21025001 chrX_21025001 RAL-382 4137 chrX 21029524 21029684 chrX 21029662 21029885 14 197 0.0 0.0 0.0 14.0 361 chrX 21029524 3` UTR CG1529 - chrX 21029704 3` UTR CG1529 - chrX 21029885 3` UTR CG1529 - chrX_14_21025001 chrX_21025001 RAL-382 4138 chrX 21061812 21061888 chrX 21062351 21062423 roo 19 535 6.5 12.0 9.2 1.9 611 chrX 21061812 intron bves + chrX 21062118 intron bves + chrX 21062423 intron,3` UTR bves +,CG32512 - chrX_19_21060001 chrX_21060001 RAL-382 4139 chrX 21076280 21076329 chrX 21076409 21076458 27 129 8.5 0.0 4.2 5.2 178 chrX 21076280 intron bves + chrX 21076369 intron bves + chrX 21076458 intron bves + chrX_27_21075001 chrX_21075001 RAL-382 4140 chrX 21086089 21086153 chrX 21087168 21087232 jockey 17 1079 10.0 9.5 9.8 1.6 1143 chrX 21086089 intergenic not near genes chrX 21086660 intergenic not near genes chrX 21087232 intergenic not near genes chrX_17_21085001 chrX_21085001 RAL-382 4141 chrX 21088006 21088057 chrX 21088177 21088226 19 177 6.5 6.5 6.5 2.5 220 chrX 21088006 intergenic not near genes chrX 21088116 intergenic not near genes chrX 21088226 intergenic not near genes chrX_19_21085001 chrX_21085001 RAL-382 4142 chrX 21190484 21190776 chrX 21190690 21190907 8 187 0.5 0.0 0.2 6.7 423 chrX 21190484 intergenic not near genes chrX 21190696 intergenic not near genes chrX 21190907 intergenic not near genes chrX_8_21190001 chrX_21190001 RAL-382 4143 chrX 21190786 21190824 chrX 21190917 21190955 10 126 0.5 8.5 4.5 1.8 169 chrX 21190786 intergenic not near genes chrX 21190870 intergenic not near genes chrX 21190955 intergenic not near genes chrX_10_21190001 chrX_21190001 RAL-382 4144 chrX 21197012 21197023 chrX 21197140 21197151 5 128 15.0 6.5 10.8 0.4 139 chrX 21197012 intergenic not near genes chrX 21197082 intergenic not near genes chrX 21197151 intergenic not near genes chrX_5_21195001 chrX_21195001 RAL-382 4145 chrX 21197025 21197085 chrX 21197134 21197176 18 124 7.0 6.0 6.5 2.4 151 chrX 21197025 intergenic not near genes chrX 21197100 intergenic not near genes chrX 21197176 intergenic not near genes chrX_18_21195001 chrX_21195001 RAL-382 4146 chrX 21268018 21268087 chrX 21268149 21268218 33 130 3.5 7.0 5.2 5.3 200 chrX 21268018 intron CG32521 - chrX 21268118 intron CG32521 - chrX 21268218 intron CG32521 - chrX_33_21265001 chrX_21265001 RAL-382 4147 chrX 21328068 21328147 chrX 21328229 21328309 33 158 6.0 7.0 6.5 4.4 241 chrX 21328068 3` UTR CG1486 + chrX 21328188 intergenic CG1486 +,tty - chrX 21328309 intergenic CG1486 +,tty - chrX_33_21325001 chrX_21325001 RAL-382 4148 chrX 21358029 21358096 chrX 21358159 21358226 30 129 9.0 8.5 8.8 3.1 197 chrX 21358029 intergenic sol +,Sep1 + chrX 21358128 intergenic Sep1 +,sol + chrX 21358226 intergenic Sep1 +,sol + chrX_30_21355001 chrX_21355001 RAL-382 4149 chrX 21410435 21410453 chrX 21410568 21410586 4 132 9.5 0.0 4.8 0.7 151 chrX 21410435 intron CR45003 - chrX 21410510 3` UTR CR45003 - chrX 21410586 intergenic CR45003 - chrX_4_21410001 chrX_21410001 RAL-382 4150 chrX 21454820 21454872 chrX 21454954 21455006 17 133 6.5 10.5 8.5 1.8 186 chrX 21454820 intron CG42343 - chrX 21454913 intron CG42343 - chrX 21455006 intron CG42343 - chrX_17_21450001 chrX_21450001 RAL-382 4151 chrX 21455172 21455245 chrX 21455396 21455482 19 234 2.0 1.0 1.5 7.6 310 chrX 21455172 intron CG42343 - chrX 21455327 intron CG42343 - chrX 21455482 intron CG42343 - chrX_19_21455001 chrX_21455001 RAL-382 4152 chrX 21458640 21458724 chrX 21464126 21464178 Ivk 27 5483 7.5 4.5 6.0 3.9 5538 chrX 21458640 intergenic not near genes chrX 21461409 intergenic not near genes chrX 21464178 intergenic not near genes chrX_27_21460001 chrX_21460001 RAL-382 4153 chrX 21474363 21474433 chrX 21474779 21474849 1731 27 415 6.0 7.0 6.5 3.6 486 chrX 21474363 intergenic not near genes chrX 21474606 intergenic not near genes chrX 21474849 intergenic not near genes chrX_27_21470001 chrX_21470001 RAL-382 4154 chrX 21516946 21516996 chrX 21517070 21517125 15 126 7.0 6.5 6.8 1.9 179 chrX 21516946 intron CR45082 - chrX 21517036 intron CR45082 - chrX 21517125 intron CR45082 - chrX_15_21515001 chrX_21515001 RAL-382 4155 chrX 21516999 21517010 chrX 21517066 21517139 4 102 4.5 6.0 5.2 0.6 140 chrX 21516999 intron CR45082 - chrX 21517069 intron CR45082 - chrX 21517139 intron CR45082 - chrX_4_21515001 chrX_21515001 RAL-382 4156 chrX 21581508 21581557 chrX 21581639 21581688 12 130 2.5 0.0 1.2 5.5 180 chrX 21581508 intergenic not near genes chrX 21581598 intergenic not near genes chrX 21581688 intergenic not near genes chrX_12_21580001 chrX_21580001 RAL-382 4157 chrX 21583496 21583506 chrX 21583631 21583641 7 135 0.0 0.5 0.2 5.8 145 chrX 21583496 intergenic CR44711 + chrX 21583568 intergenic CR44711 + chrX 21583641 intergenic CR44711 + chrX_7_21580001 chrX_21580001 RAL-382 4158 chrX 21595522 21595561 chrX 21598645 21598684 micropia 10 3123 6.5 6.5 6.5 1.3 3162 chrX 21595522 intergenic not near genes chrX 21597103 intergenic not near genes chrX 21598684 intergenic not near genes chrX_10_21595001 chrX_21595001 RAL-382 4159 chrX 21602812 21602885 chrX 21602971 21603045 4 160 4.5 7.5 6.0 0.6 233 chrX 21602812 exon CG14476 - chrX 21602928 intron CG14476 - chrX 21603045 exon CG14476 - chrX_4_21600001 chrX_21600001 RAL-382 4160 chrX 21668209 21668286 chrX 21668344 21668421 36 133 6.5 1.5 4.0 7.2 212 chrX 21668209 intergenic not near genes chrX 21668315 intergenic not near genes chrX 21668421 intergenic not near genes chrX_36_21665001 chrX_21665001 RAL-382 4161 chrX 22478827 22478878 chrX 22479010 22479061 22 183 8.5 5.0 6.8 2.8 234 chrX 22478827 intron CG12576 - chrX 22478944 intron CG12576 - chrX 22479061 intron CG12576 - chrX_22_22475001 chrX_22475001 RAL-382 4162 chrX 22519268 22519326 chrX 22519453 22519511 20 184 4.5 8.5 6.5 2.7 243 chrX 22519268 intron CG17600 + chrX 22519390 intron CG17600 + chrX 22519511 intron CG17600 + chrX_20_22515001 chrX_22515001 RAL-382 4163 chrX 22522596 22522660 chrX 22525464 22525530 NOF 8 2870 5.5 6.5 6.0 1.1 2934 chrX 22522596 intron CG17600 + chrX 22524063 intron CG17600 + chrX 22525530 intron CG17600 + chrX_8_22520001 chrX_22520001 RAL-382 4164 chrX 22660530 22660600 chrX 22660664 22660734 9 131 8.0 5.0 6.5 1.2 204 chrX 22660530 intron CR44997 + chrX 22660632 intron CR44997 + chrX 22660734 intron CR44997 + chrX_9_22660001 chrX_22660001 RAL-382 4165 chrX 22681447 22681459 chrX 22688955 22688967 HMS-Beagle2 6 7508 12.5 8.0 10.2 0.5 7520 chrX 22681447 intron CR44997 + chrX 22685207 intron CR44997 + chrX 22688967 intron CR44997 + chrX_6_22685001 chrX_22685001 RAL-382 4166 chrX 22681470 22681500 chrX 22688951 22689008 HMS-Beagle2 9 7502 7.5 7.5 7.5 1.1 7538 chrX 22681470 intron CR44997 + chrX 22685239 intron CR44997 + chrX 22689008 intron CR44997 + chrX_9_22685001 chrX_22685001 RAL-382 4167 chrX 22697459 22697512 chrX 22701806 22701859 Juan 16 4347 9.5 10.0 9.8 1.5 4400 chrX 22697459 intron CR44997 + chrX 22699659 intron CR44997 + chrX 22701859 intron CR44997 + chrX_16_22695001 chrX_22695001 RAL-382 4168 chrX 22734410 22734451 chrX 22734539 22734580 10 129 4.5 5.0 4.8 1.7 170 chrX 22734410 intron CR44997 + chrX 22734495 intron CR44997 + chrX 22734580 intron CR44997 + chrX_10_22730001 chrX_22730001 RAL-382 4169 chrX 22771461 22771526 chrX 22774802 22774861 297 17 3339 7.5 6.5 7.0 2.1 3400 chrX 22771461 intron CR44997 + chrX 22773161 intron CR44997 + chrX 22774861 intron CR44997 + chrX_17_22770001 chrX_22770001 RAL-382 4170 chrX 22824222 22824435 chrX 22824398 22824618 35 180 0.5 0.5 0.5 23.3 396 chrX 22824222 intergenic fog - chrX 22824420 3` UTR fog - chrX 22824618 3` UTR fog - chrX_35_22820001 chrX_22820001 RAL-382 4171 chrX 22844490 22844524 chrX 22844627 22844646 11 134 9.5 7.5 8.5 1.2 156 chrX 22844490 intron,intron fog -,CG42346 + chrX 22844568 intron,intron fog -,CG42346 + chrX 22844646 intron,intron fog -,CG42346 + chrX_11_22840001 chrX_22840001 RAL-382 4172 chrX 22960782 22960795 chrX 22961034 22961047 8 252 0.5 12.0 6.2 1.1 265 chrX 22960782 3` UTR CG40485 - chrX 22960914 3` UTR CG40485 - chrX 22961047 3` UTR CG40485 - chrX_8_22960001 chrX_22960001 RAL-382 4173 chrX 22956534 22956548 chrX 22969924 22969938 7 13391 11.0 31.0 21.0 0.3 13404 chrX 22956534 intergenic not near genes chrX 22963236 intergenic not near genes chrX 22969938 intergenic not near genes chrX_7_22960001 chrX_22960001 RAL-382 4174 chrX 22987065 22987126 chrX 22989774 22989805 Burdock 28 2708 4.5 12.5 8.5 2.9 2740 chrX 22987065 intron,intron stnA -,stnB - chrX 22988435 intron,intron stnA -,stnB - chrX 22989805 intron,intron stnA -,stnB - chrX_28_22985001 chrX_22985001 RAL-382 4175 chrX 22992349 22992422 chrX 22992530 22992603 22 179 5.0 5.5 5.2 3.5 254 chrX 22992349 intron,intron stnA -,stnB - chrX 22992476 intron,intron stnA -,stnB - chrX 22992603 3` UTR,exon stnA -,stnB - chrX_22_22990001 chrX_22990001 RAL-382 4176 chrX 22996271 22996332 chrX 23003553 23003614 roo 27 7281 7.5 11.5 9.5 2.6 7343 chrX 22996271 intron,intron stnA -,stnB - chrX 22999942 intron,intron stnA -,stnB - chrX 23003614 intron,intron stnA -,stnB - chrX_27_22995001 chrX_22995001 RAL-382 4177 chrY 864684 864743 chrY 864811 864869 4 126 37.5 37.5 37.5 0.1 185 chrY 864684 intergenic not near genes chrY 864776 intergenic not near genes chrY 864869 intergenic not near genes chrY_4_860001 chrY_860001 RAL-382 4178 chrY 975596 975816 chrY 975758 975921 14 128 156.5 134.5 145.5 0.1 325 chrY 975596 intergenic not near genes chrY 975758 intergenic not near genes chrY 975921 intergenic not near genes chrY_14_975001 chrY_975001 RAL-382 4179 chrY 1419854 1419888 chrY 1420158 1420165 13 301 29.0 26.0 27.5 0.5 311 chrY 1419854 intergenic not near genes chrY 1420010 intergenic not near genes chrY 1420165 intergenic not near genes chrY_13_1420001 chrY_1420001 RAL-382 4180 chrY 1420588 1420652 chrY 1420747 1420778 7 144 25.0 32.5 28.8 0.2 190 chrY 1420588 intergenic not near genes chrY 1420683 intergenic not near genes chrY 1420778 intergenic not near genes chrY_7_1420001 chrY_1420001 RAL-382 4181 chrY 1445411 1445435 chrY 1447392 1447415 17 1980 19.0 28.0 23.5 0.7 2004 chrY 1445411 intergenic not near genes chrY 1446413 intergenic not near genes chrY 1447415 intergenic not near genes chrY_17_1445001 chrY_1445001 RAL-382 4182 chrY 3561957 3562031 chrY 3562087 3562149 8 131 13.5 12.5 13.0 0.6 192 chrY 3561957 intergenic not near genes chrY 3562053 intergenic not near genes chrY 3562149 intergenic not near genes chrY_8_3560001 chrY_3560001 RAL-382 4183 chrY 3664938 3665012 chrY 3665092 3665166 11 150 0.0 3.0 1.5 4.4 228 chrY 3664938 intergenic CG40948 + chrY 3665052 intergenic CG40948 + chrY 3665166 intergenic not near genes chrY_11_3665001 chrY_3665001 RAL-382 4184 chrY 3666384 3666462 chrY 3666587 3666665 6 203 3.5 1.0 2.2 1.9 281 chrY 3666384 intergenic not near genes chrY 3666524 intergenic not near genes chrY 3666665 intergenic not near genes chrY_6_3665001 chrY_3665001 RAL-382