SV# Chr Chr_coord_5p Chr_coord_3p TE TE_coord_start TE_coord_end Reads_collapsed Chr_Coord_Dist Symmetry avg_blat_score Norm_RefGen_Reads Coverage_Ratio classification comments insert_code loci_code Sym_score libname 1 chr2L 225427 225451 jockey 4961 4985 5 24 '3-2 64.95 16.6 0.3 intron kis - chr2L_5_225001 chr2L_225001 0.60 RAL-381 2 chr2L 490654 490698 P-element 2886 2854 10 44 '6-4 47.76 9.9 0.9 intron ush + chr2L_10_490001 chr2L_490001 0.60 RAL-381 3 chr2L 519842 519916 roo 406 8668 13 74 '10-3 61.85 6.3 1.8 intron ush + chr2L_13_515001 chr2L_515001 0.77 RAL-381 4 chr2L 833297 833325 jockey 27 5 14 28 '7-7 55.24 6.8 1.8 intergenic dock +,drongo - chr2L_14_830001 chr2L_830001 0.50 RAL-381 5 chr2L 903812 903882 1360 6 3 12 70 '5-7 64.76 7.9 1.3 intergenic CR45261 + chr2L_12_900001 chr2L_900001 0.42 RAL-381 6 chr2L 936663 936705 I-element 9 5327 7 42 '5-2 61.71 3.0 1.8 intron CG4341 + chr2L_7_935001 chr2L_935001 0.71 RAL-381 7 chr2L 961513 961550 412 11 467 5 37 '4-1 62.21 10.0 0.5 intergenic not near genes chr2L_5_960001 chr2L_960001 0.80 RAL-381 8 chr2L 1069035 1069103 FB 2 7 9 68 '3-6 63.54 5.4 1.4 intron S - chr2L_9_1065001 chr2L_1065001 0.33 RAL-381 9 chr2L 1258721 1258795 hopper 3 4 6 74 '4-2 65.10 3.6 1.3 intron robo3 + chr2L_6_1255001 chr2L_1255001 0.67 RAL-381 10 chr2L 1408963 1408994 roo 8662 8693 5 31 '2-3 66.40 9.4 0.5 intron lea - chr2L_5_1405001 chr2L_1405001 0.40 RAL-381 11 chr2L 2304223 2304281 roo 5 9054 8 58 '3-5 64.08 8.9 0.8 intergenic not near genes chr2L_8_2300001 chr2L_2300001 0.38 RAL-381 12 chr2L 2543193 2543266 roo 406 5 16 73 '6-10 62.07 8.0 1.8 intergenic not near genes chr2L_16_2540001 chr2L_2540001 0.38 RAL-381 13 chr2L 2908317 2908386 Burdock 6390 6148 12 69 '9-3 74.01 8.0 1.3 intron lilli + chr2L_12_2905001 chr2L_2905001 0.75 RAL-381 14 chr2L 3001539 3001600 FB 8 6 8 61 '5-3 66.88 7.9 0.9 intron CG17265 + chr2L_8_3000001 chr2L_3000001 0.62 RAL-381 15 chr2L 3115628 3115696 roo 399 8667 12 68 '5-7 62.11 2.0 4.0 intron toc - chr2L_12_3115001 chr2L_3115001 0.42 RAL-381 16 chr2L 3182944 3183011 P-element 2 2878 6 67 '4-2 37.88 4.2 1.2 intron CG34393 - chr2L_6_3180001 chr2L_3180001 0.67 RAL-381 17 chr2L 3339971 3340015 FB 20 13 5 44 '2-3 64.08 4.7 0.9 intron E23 - chr2L_5_3335001 chr2L_3335001 0.40 RAL-381 18 chr2L 3440481 3440505 Juan 9 3 11 24 '4-7 60.14 10.2 1.0 intergenic not near genes chr2L_11_3440001 chr2L_3440001 0.36 RAL-381 19 chr2L 3617946 3617996 412 17 479 6 50 '3-3 58.00 7.0 0.8 intergenic CR44310 + chr2L_6_3615001 chr2L_3615001 0.50 RAL-381 20 chr2L 3890138 3890266 jockey 4756 4979 7 128 '3-4 68.81 3.4 1.6 intron capu - chr2L_7_3890001 chr2L_3890001 0.43 RAL-381 21 chr2L 4061921 4061994 S-element 1707 1 9 73 '2-7 62.90 4.7 1.6 intron ed + chr2L_9_4060001 chr2L_4060001 0.22 RAL-381 22 chr2L 4240284 4240366 17.6 493 5 6 82 '1-5 66.66 5.7 0.9 3` UTR CR45720 - chr2L_6_4240001 chr2L_4240001 0.17 RAL-381 23 chr2L 4261341 4261619 mdg1 7070 406 5 278 '1-4 64.08 7.5 0.6 intergenic CR44080 - chr2L_5_4260001 chr2L_4260001 0.20 RAL-381 24 chr2L 4415835 4415853 jockey 14 18 9 18 '5-4 54.67 8.8 0.9 intron CG15431 - chr2L_9_4415001 chr2L_4415001 0.56 RAL-381 25 chr2L 4434262 4434313 FB 7 2 9 51 '7-2 61.51 12.2 0.7 intron,intron,intron CG15431 -,CG34177 +,CG34178 + chr2L_9_4430001 chr2L_4430001 0.78 RAL-381 26 chr2L 4719009 4719066 copia 243 4880 6 57 '3-3 67.11 11.4 0.5 intron CG34351 + chr2L_6_4715001 chr2L_4715001 0.50 RAL-381 27 chr2L 4749017 4749049 roo 9069 9037 6 32 '4-2 66.41 12.3 0.5 intron CG15630 - chr2L_6_4745001 chr2L_4745001 0.67 RAL-381 28 chr2L 4785600 4785664 Stalker2 7648 7247 9 64 '3-6 63.90 11.7 0.7 intron CG15630 - chr2L_9_4785001 chr2L_4785001 0.33 RAL-381 29 chr2L 4923896 4923931 roo 32 404 7 35 '2-5 69.04 5.9 1.0 intron hoe1 - chr2L_7_4920001 chr2L_4920001 0.29 RAL-381 30 chr2L 5230890 5230966 opus 499 5 12 76 '9-3 67.80 6.5 1.6 intron tkv - chr2L_12_5230001 chr2L_5230001 0.75 RAL-381 31 chr2L 5290773 5290837 Transpac 5225 4933 11 64 '7-4 67.15 4.3 2.1 intron vri + chr2L_11_5290001 chr2L_5290001 0.64 RAL-381 32 chr2L 5711945 5712014 hobo 2937 3 10 69 '4-6 60.18 7.5 1.2 intron CG7236 + chr2L_10_5710001 chr2L_5710001 0.40 RAL-381 33 chr2L 5724315 5724370 1360 3377 12 6 55 '2-4 60.86 3.3 1.4 intergenic CG11030 +,sip1 + chr2L_6_5720001 chr2L_5720001 0.33 RAL-381 34 chr2L 5729834 5729852 FB 25 7 6 18 '4-2 64.91 9.9 0.6 intron CG11030 + chr2L_6_5725001 chr2L_5725001 0.67 RAL-381 35 chr2L 5794330 5794386 FB 4 17 11 56 '7-4 62.59 4.2 2.1 intron CG9171 - chr2L_11_5790001 chr2L_5790001 0.64 RAL-381 36 chr2L 5801853 5801912 P-element 5 2880 8 59 '6-2 50.64 7.3 1.0 exon CG14005 - chr2L_8_5800001 chr2L_5800001 0.75 RAL-381 37 chr2L 5805232 5805252 jockey 9 29 6 20 '1-5 55.54 5.6 0.9 intergenic CG11034 + chr2L_6_5805001 chr2L_5805001 0.17 RAL-381 38 chr2L 5838998 5839021 BS 23 1 5 23 '1-4 59.55 14.3 0.3 intron TrissinR + chr2L_5_5835001 chr2L_5835001 0.20 RAL-381 39 chr2L 6127571 6127633 P-element 8 2879 12 62 '6-6 48.66 13.4 0.8 intron WDR79 - chr2L_12_6125001 chr2L_6125001 0.50 RAL-381 40 chr2L 6151473 6151554 blood 376 7010 9 81 '7-2 68.25 3.0 2.2 intergenic Muc26B + chr2L_9_6150001 chr2L_6150001 0.78 RAL-381 41 chr2L 6280282 6280336 Burdock 230 6136 5 54 '1-4 67.28 5.3 0.8 intron Ddr + chr2L_5_6280001 chr2L_6280001 0.20 RAL-381 42 chr2L 6296707 6296775 TART-A 13149 13112 5 68 '3-2 64.13 4.1 1.0 exon Ddr + chr2L_5_6295001 chr2L_6295001 0.60 RAL-381 43 chr2L 6446126 6446199 297 5 390 9 73 '6-3 65.53 6.9 1.1 exon CG9527 - chr2L_9_6445001 chr2L_6445001 0.67 RAL-381 44 chr2L 6710380 6710459 Transpac 308 4920 16 79 '11-5 63.12 11.5 1.3 intergenic not near genes chr2L_16_6710001 chr2L_6710001 0.69 RAL-381 45 chr2L 6870839 6870906 hobo 2930 2 8 67 '4-4 65.27 8.7 0.8 intergenic Nha1 -,CR44915 - chr2L_8_6870001 chr2L_6870001 0.50 RAL-381 46 chr2L 6871476 6871495 Juan 3904 3923 4 19 '2-2 60.42 8.6 0.4 3` UTR CR44915 - chr2L_4_6870001 chr2L_6870001 0.50 RAL-381 47 chr2L 6889139 6889221 mdg3 5255 250 16 82 '5-11 66.77 5.9 2.3 intron Nlg2 + chr2L_16_6885001 chr2L_6885001 0.31 RAL-381 48 chr2L 6966502 6966570 P-element 3 7 14 68 '7-7 46.64 7.3 1.7 intergenic smt3 - chr2L_14_6965001 chr2L_6965001 0.50 RAL-381 49 chr2L 7493259 7493321 copia 241 4873 4 62 '1-3 66.67 1.9 1.4 intron Ziz - chr2L_4_7490001 chr2L_7490001 0.25 RAL-381 50 chr2L 7554234 7554297 1360 3381 3384 8 63 '3-5 66.17 3.3 1.9 intron RapGAP1 - chr2L_8_7550001 chr2L_7550001 0.38 RAL-381 51 chr2L 7593039 7593104 412 7539 7 7 65 '2-5 61.21 6.6 0.9 intergenic not near genes chr2L_7_7590001 chr2L_7590001 0.29 RAL-381 52 chr2L 7600424 7600443 Doc 10 22 7 19 '6-1 59.33 6.4 0.9 intergenic not near genes chr2L_7_7600001 chr2L_7600001 0.86 RAL-381 53 chr2L 8095158 8095224 roo 8679 409 11 66 '3-8 67.22 3.2 2.6 intron Bsg + chr2L_11_8095001 chr2L_8095001 0.27 RAL-381 54 chr2L 8129201 8129280 S-element 1715 1713 7 79 '3-4 65.84 8.8 0.7 intron CG8668 + chr2L_7_8125001 chr2L_8125001 0.43 RAL-381 55 chr2L 8205127 8205194 P-element 2886 2878 21 67 '14-7 43.69 7.0 2.6 5` UTR,5` UTR SLC5A11 -,CR44119 + chr2L_21_8205001 chr2L_8205001 0.67 RAL-381 56 chr2L 8328711 8328775 roo 6 398 8 64 '5-3 64.53 7.9 0.9 intron CG14275 + chr2L_8_8325001 chr2L_8325001 0.62 RAL-381 57 chr2L 8547866 8547889 FB 1 20 5 23 '1-4 67.42 0.7 2.9 intron Sema-1a + chr2L_5_8545001 chr2L_8545001 0.20 RAL-381 58 chr2L 8563539 8563612 blood 371 7011 4 73 '2-2 65.67 6.4 0.5 intron Sema-1a + chr2L_4_8560001 chr2L_8560001 0.50 RAL-381 59 chr2L 8570777 8570844 1360 1 223 11 67 '6-5 61.90 7.8 1.2 intron Sema-1a + chr2L_11_8570001 chr2L_8570001 0.55 RAL-381 60 chr2L 8620843 8620919 hobo 2710 2 9 76 '5-4 65.92 8.5 0.9 intron Sema-1a + chr2L_9_8620001 chr2L_8620001 0.56 RAL-381 61 chr2L 8622758 8622818 297 395 19 6 60 '3-3 72.43 9.4 0.6 intron Sema-1a + chr2L_6_8620001 chr2L_8620001 0.50 RAL-381 62 chr2L 8879709 8879731 412 11 1 7 22 '4-3 62.37 14.3 0.5 intergenic not near genes chr2L_7_8875001 chr2L_8875001 0.57 RAL-381 63 chr2L 8959914 8959930 Ivk 5082 5098 4 16 '2-2 50.00 3.8 0.8 3` UTR CG9525 - chr2L_4_8955001 chr2L_8955001 0.50 RAL-381 64 chr2L 8993975 8994030 pogo 2078 4 6 55 '3-3 73.19 7.5 0.7 3` UTR alien - chr2L_6_8990001 chr2L_8990001 0.50 RAL-381 65 chr2L 9421953 9422004 pogo 11 2080 7 51 '6-1 65.96 2.8 1.8 intron Mco1 + chr2L_7_9420001 chr2L_9420001 0.86 RAL-381 66 chr2L 9630672 9630742 412 484 1 10 70 '5-5 60.12 7.9 1.1 intergenic not near genes chr2L_10_9630001 chr2L_9630001 0.50 RAL-381 67 chr2L 9773991 9774058 297 6584 382 12 67 '11-1 66.08 6.0 1.7 exon ppk11 - chr2L_12_9770001 chr2L_9770001 0.92 RAL-381 68 chr2L 9879948 9880009 hopper 4 1399 13 61 '9-4 62.88 9.3 1.3 intron nAChRalpha6 - chr2L_13_9875001 chr2L_9875001 0.69 RAL-381 69 chr2L 10052974 10053040 hobo 2934 7 5 66 '2-3 62.99 7.8 0.6 intergenic not near genes chr2L_5_10050001 chr2L_10050001 0.40 RAL-381 70 chr2L 10295876 10295946 roo 9058 8661 9 70 '5-4 70.96 3.1 2.2 3` UTR CYLD - chr2L_9_10295001 chr2L_10295001 0.56 RAL-381 71 chr2L 10324954 10325024 mdg1 7037 409 5 70 '4-1 68.27 7.9 0.6 exon CG4995 + chr2L_5_10320001 chr2L_10320001 0.80 RAL-381 72 chr2L 10701044 10701065 opus 474 491 5 21 '4-1 74.67 4.1 1.0 intron Lip1 - chr2L_5_10700001 chr2L_10700001 0.80 RAL-381 73 chr2L 10937393 10937471 roo 411 8664 17 78 '10-7 65.68 9.1 1.7 intron,exon dpr2 -,CG14072 + chr2L_17_10935001 chr2L_10935001 0.59 RAL-381 74 chr2L 11177460 11177507 pogo 14 2078 4 47 '3-1 70.67 4.3 0.8 intron Ca-beta - chr2L_4_11175001 chr2L_11175001 0.75 RAL-381 75 chr2L 11369006 11369029 roo 9064 9041 4 23 '2-2 71.33 9.1 0.4 exon salr + chr2L_4_11365001 chr2L_11365001 0.50 RAL-381 76 chr2L 11528348 11528370 pogo 8 3 4 22 '2-2 67.29 5.7 0.6 intergenic CG31705 - chr2L_4_11525001 chr2L_11525001 0.50 RAL-381 77 chr2L 11703968 11704060 opus 495 110 6 92 '1-5 62.29 2.3 1.8 intergenic not near genes chr2L_6_11700001 chr2L_11700001 0.17 RAL-381 78 chr2L 11726177 11726206 jockey 4984 20 5 29 '2-3 61.02 8.9 0.5 intergenic not near genes chr2L_5_11725001 chr2L_11725001 0.40 RAL-381 79 chr2L 11738157 11738180 297 6971 6960 4 23 '1-3 68.88 4.6 0.7 intergenic not near genes chr2L_4_11735001 chr2L_11735001 0.25 RAL-381 80 chr2L 11923562 11923578 HMS-Beagle 6794 14 5 16 '4-1 73.27 6.2 0.7 intron Pde1c - chr2L_5_11920001 chr2L_11920001 0.80 RAL-381 81 chr2L 12045202 12045287 P-element 2881 2882 9 85 '3-6 45.38 5.3 1.4 intergenic CG6785 -,CG6770 - chr2L_9_12045001 chr2L_12045001 0.33 RAL-381 82 chr2L 12283938 12284017 invader4 328 11 8 79 '5-3 68.23 4.3 1.5 intron aret + chr2L_8_12280001 chr2L_12280001 0.62 RAL-381 83 chr2L 12397476 12397551 roo 410 8671 7 75 '3-4 67.43 1.5 2.8 3` UTR bru-2 + chr2L_7_12395001 chr2L_12395001 0.43 RAL-381 84 chr2L 12603197 12603244 412 12 7527 6 47 '3-3 65.07 4.9 1.0 intron nub + chr2L_6_12600001 chr2L_12600001 0.50 RAL-381 85 chr2L 12760392 12760449 412 3 483 5 57 '1-4 64.30 4.1 1.0 3` UTR CG15483 - chr2L_5_12760001 chr2L_12760001 0.20 RAL-381 86 chr2L 12833353 12833404 412 486 23 6 51 '3-3 63.64 7.7 0.7 intergenic not near genes chr2L_6_12830001 chr2L_12830001 0.50 RAL-381 87 chr2L 12861660 12861676 jockey 4769 4785 6 16 '3-3 62.57 7.7 0.7 intergenic not near genes chr2L_6_12860001 chr2L_12860001 0.50 RAL-381 88 chr2L 12949963 12949987 jockey 4564 4560 9 24 '4-5 57.62 13.4 0.6 intergenic not near genes chr2L_9_12945001 chr2L_12945001 0.44 RAL-381 89 chr2L 13026178 13026201 roo 8674 32 5 23 '1-4 71.42 8.2 0.5 intron CG9932 - chr2L_5_13025001 chr2L_13025001 0.20 RAL-381 90 chr2L 13323139 13323204 Max-element 8233 301 12 65 '5-7 65.61 4.4 2.2 intron CG43778 - chr2L_12_13320001 chr2L_13320001 0.42 RAL-381 91 chr2L 13550083 13550148 P-element 2880 2881 9 65 '6-3 44.82 4.1 1.8 intergenic kuz + chr2L_9_13550001 chr2L_13550001 0.67 RAL-381 92 chr2L 13588446 13588528 297 6581 388 5 82 '3-2 67.73 7.7 0.6 intron kuz + chr2L_5_13585001 chr2L_13585001 0.60 RAL-381 93 chr2L 13609258 13609339 blood 378 1 13 81 '10-3 64.62 10.8 1.1 intron kuz + chr2L_13_13605001 chr2L_13605001 0.77 RAL-381 94 chr2L 13738977 13739031 hobo 2935 19 9 54 '3-6 63.67 9.2 0.9 intergenic not near genes chr2L_9_13735001 chr2L_13735001 0.33 RAL-381 95 chr2L 13740518 13740592 rover 348 3 5 74 '1-4 67.55 9.1 0.5 intergenic not near genes chr2L_5_13740001 chr2L_13740001 0.20 RAL-381 96 chr2L 14002380 14002445 Burdock 6390 6150 8 65 '3-5 68.19 3.6 1.7 intergenic not near genes chr2L_8_14000001 chr2L_14000001 0.38 RAL-381 97 chr2L 14073638 14073716 roo 406 8663 19 78 '11-8 66.33 6.7 2.5 intron nAChRalpha5 + chr2L_19_14070001 chr2L_14070001 0.58 RAL-381 98 chr2L 14242297 14242364 diver 5887 211 10 67 '8-2 63.83 5.7 1.5 intergenic not near genes chr2L_10_14240001 chr2L_14240001 0.80 RAL-381 99 chr2L 14252339 14252364 jockey 15 34 4 25 '1-3 68.59 0.3 3.1 intergenic not near genes chr2L_4_14250001 chr2L_14250001 0.25 RAL-381 100 chr2L 14430414 14430491 roo 403 8662 10 77 '5-5 64.48 9.2 1.0 3` UTR CR44732 - chr2L_10_14430001 chr2L_14430001 0.50 RAL-381 101 chr2L 14759471 14759500 copia 32 3 8 29 '4-4 67.21 8.4 0.9 intergenic not near genes chr2L_8_14755001 chr2L_14755001 0.50 RAL-381 102 chr2L 14799646 14799669 Doc 12 26 6 23 '2-4 60.77 4.6 1.1 intergenic not near genes chr2L_6_14795001 chr2L_14795001 0.33 RAL-381 103 chr2L 14832354 14832411 opus 7488 7115 4 57 '2-2 60.09 3.2 1.0 intergenic not near genes chr2L_4_14830001 chr2L_14830001 0.50 RAL-381 104 chr2L 14888796 14888852 hobo 2926 9 9 56 '4-5 64.98 4.7 1.6 intergenic not near genes chr2L_9_14885001 chr2L_14885001 0.44 RAL-381 105 chr2L 14912968 14913011 Stalker2 7633 20 8 43 '2-6 63.50 10.7 0.7 exon CG42313 - chr2L_8_14910001 chr2L_14910001 0.25 RAL-381 106 chr2L 14934424 14934493 hobo 2931 1 10 69 '3-7 65.01 6.7 1.3 intron CG42313 - chr2L_10_14930001 chr2L_14930001 0.30 RAL-381 107 chr2L 15039440 15039483 P-element 24 2876 7 43 '4-3 38.26 8.6 0.7 intergenic Su(H) + chr2L_7_15035001 chr2L_15035001 0.57 RAL-381 108 chr2L 15066508 15066578 pogo 2098 11 4 70 '1-3 66.66 3.1 1.0 intron,intron vas +,vig - chr2L_4_15065001 chr2L_15065001 0.25 RAL-381 109 chr2L 15142263 15142282 BS 4718 4737 6 19 '3-3 58.59 8.9 0.6 intergenic not near genes chr2L_6_15140001 chr2L_15140001 0.50 RAL-381 110 chr2L 15228596 15228658 blood 7009 7362 10 62 '8-2 64.66 4.9 1.7 intergenic ZnT35C - chr2L_10_15225001 chr2L_15225001 0.80 RAL-381 111 chr2L 15333461 15333519 P-element 17 1 8 58 '3-5 48.75 6.1 1.1 intergenic esg + chr2L_8_15330001 chr2L_15330001 0.38 RAL-381 112 chr2L 15466096 15466161 Max-element 8532 8238 5 65 '2-3 50.89 5.8 0.7 intergenic not near genes chr2L_5_15465001 chr2L_15465001 0.40 RAL-381 113 chr2L 15808646 15808719 roo 8669 406 7 73 '4-3 67.00 6.6 0.9 3` UTR CR44602 - chr2L_7_15805001 chr2L_15805001 0.57 RAL-381 114 chr2L 15907014 15907092 HMS-Beagle 244 6797 9 78 '4-5 67.72 5.0 1.5 intron beat-Ib - chr2L_9_15905001 chr2L_15905001 0.44 RAL-381 115 chr2L 16049879 16049930 P-element 2871 9 12 51 '5-7 43.71 8.3 1.3 intergenic beat-Ia + chr2L_12_16045001 chr2L_16045001 0.42 RAL-381 116 chr2L 16067061 16067124 Burdock 257 6147 13 63 '8-5 67.05 9.1 1.3 intron beat-Ia + chr2L_13_16065001 chr2L_16065001 0.62 RAL-381 117 chr2L 16221540 16221583 412 7085 7539 4 43 '1-3 69.84 8.4 0.4 intergenic not near genes chr2L_4_16220001 chr2L_16220001 0.25 RAL-381 118 chr2L 16285492 16285566 S-element 4 6 4 74 '1-3 68.22 6.8 0.5 intron crp - chr2L_4_16285001 chr2L_16285001 0.25 RAL-381 119 chr2L 16561278 16561352 roo 9066 8664 12 74 '5-7 64.71 10.4 1.1 intron CG42389 + chr2L_12_16560001 chr2L_16560001 0.42 RAL-381 120 chr2L 16704229 16704306 297 391 6583 7 77 '1-6 70.89 3.1 1.7 intergenic CG31808 - chr2L_7_16700001 chr2L_16700001 0.14 RAL-381 121 chr2L 16758813 16758859 roo 8671 9044 4 46 '2-2 65.05 7.4 0.5 exon ppk17 - chr2L_4_16755001 chr2L_16755001 0.50 RAL-381 122 chr2L 17014631 17014696 P-element 2 2876 5 65 '3-2 51.47 6.0 0.7 5` UTR CG6304 - chr2L_5_17010001 chr2L_17010001 0.60 RAL-381 123 chr2L 17082935 17082959 micropia 4980 3 6 24 '4-2 56.57 6.1 0.8 intergenic not near genes chr2L_6_17080001 chr2L_17080001 0.67 RAL-381 124 chr2L 17091105 17091163 hopper 1402 10 7 58 '5-2 60.83 8.0 0.8 intergenic not near genes chr2L_7_17090001 chr2L_17090001 0.71 RAL-381 125 chr2L 17115728 17115781 hobo 2931 16 8 53 '2-6 61.35 3.6 1.7 intergenic not near genes chr2L_8_17115001 chr2L_17115001 0.25 RAL-381 126 chr2L 17290609 17290674 1360 3385 10 10 65 '3-7 65.79 5.3 1.6 intergenic CG6380 - chr2L_10_17290001 chr2L_17290001 0.30 RAL-381 127 chr2L 17351652 17351723 blood 7380 1 16 71 '8-8 63.97 11.3 1.3 intergenic not near genes chr2L_16_17350001 chr2L_17350001 0.50 RAL-381 128 chr2L 17354109 17354191 Max-element 8233 301 8 82 '7-1 62.38 5.6 1.2 3` UTR CR43239 - chr2L_8_17350001 chr2L_17350001 0.88 RAL-381 129 chr2L 17380645 17380721 297 6580 6969 13 76 '8-5 70.90 3.2 3.1 intron Lrch - chr2L_13_17380001 chr2L_17380001 0.62 RAL-381 130 chr2L 17447808 17447874 roo 10 9069 11 66 '3-8 62.60 5.1 1.8 intron dl - chr2L_11_17445001 chr2L_17445001 0.27 RAL-381 131 chr2L 17737138 17737212 HMS-Beagle2 6890 311 8 74 '5-3 63.72 5.7 1.2 intron CadN - chr2L_8_17735001 chr2L_17735001 0.62 RAL-381 132 chr2L 18102818 18102880 hobo 2928 5 9 62 '4-5 59.98 4.2 1.7 intergenic not near genes chr2L_9_18100001 chr2L_18100001 0.44 RAL-381 133 chr2L 18176492 18176557 Burdock 6134 6373 4 65 '2-2 77.58 9.0 0.4 intron CG42750 - chr2L_4_18175001 chr2L_18175001 0.50 RAL-381 134 chr2L 18185793 18185852 hobo 2 2929 12 59 '10-2 64.19 10.6 1.0 intron,3` UTR CG42750 -,CR44900 - chr2L_12_18185001 chr2L_18185001 0.83 RAL-381 135 chr2L 18553086 18553153 412 5 7537 9 67 '6-3 65.04 14.8 0.6 intron Pde11 - chr2L_9_18550001 chr2L_18550001 0.67 RAL-381 136 chr2L 18796106 18796179 P-element 1 4 14 73 '7-7 51.42 7.8 1.6 3` UTR CR44904 - chr2L_14_18795001 chr2L_18795001 0.50 RAL-381 137 chr2L 18913384 18913457 roo 4 405 11 73 '3-8 67.03 6.6 1.4 intergenic not near genes chr2L_11_18910001 chr2L_18910001 0.27 RAL-381 138 chr2L 19118590 19118616 copia 225 252 4 26 '1-3 64.56 5.2 0.6 intron Ddc - chr2L_4_19115001 chr2L_19115001 0.25 RAL-381 139 chr2L 19218725 19218766 I-element 5328 5 9 41 '4-5 65.41 8.0 1.0 intergenic not near genes chr2L_9_19215001 chr2L_19215001 0.44 RAL-381 140 chr2L 19418009 19418037 jockey 9 36 5 28 '3-2 60.82 17.6 0.3 intron,exon Pax -,Lectin-galC1 + chr2L_5_19415001 chr2L_19415001 0.60 RAL-381 141 chr2L 19556428 19556443 pogo 2091 2076 5 15 '2-3 63.73 15.0 0.3 3` UTR Tep4 + chr2L_5_19555001 chr2L_19555001 0.40 RAL-381 142 chr2L 19558727 19558802 opus 495 4 12 75 '7-5 65.90 4.3 2.3 intron Tep5 + chr2L_12_19555001 chr2L_19555001 0.58 RAL-381 143 chr2L 19642308 19642382 mdg3 5492 5253 8 74 '3-5 63.24 6.3 1.1 intron Lar + chr2L_8_19640001 chr2L_19640001 0.38 RAL-381 144 chr2L 19929765 19929837 jockey 4567 4558 6 72 '3-3 62.45 6.6 0.8 intron sick + chr2L_6_19925001 chr2L_19925001 0.50 RAL-381 145 chr2L 19940129 19940179 HMS-Beagle 6796 7017 10 50 '5-5 64.67 13.4 0.7 intron sick + chr2L_10_19940001 chr2L_19940001 0.50 RAL-381 146 chr2L 20407546 20407623 roo 8663 9067 14 77 '9-5 69.87 6.4 1.9 intron CG10947 - chr2L_14_20405001 chr2L_20405001 0.64 RAL-381 147 chr2L 20530901 20530950 mdg1 23 7452 4 49 '2-2 60.94 3.3 0.9 intergenic CG44270 + chr2L_4_20530001 chr2L_20530001 0.50 RAL-381 148 chr2L 20822063 20822109 Tirant 8110 8492 4 46 '3-1 57.97 5.4 0.6 intergenic not near genes chr2L_4_20820001 chr2L_20820001 0.75 RAL-381 149 chr2L 20841945 20841967 G6 2015 2014 4 22 '3-1 60.25 15.7 0.2 intron CG31676 + chr2L_4_20840001 chr2L_20840001 0.75 RAL-381 150 chr2L 20882613 20882689 opus 1 7496 6 76 '2-4 69.08 3.8 1.2 intron,intron CG43739 -,sky - chr2L_6_20880001 chr2L_20880001 0.33 RAL-381 151 chr2L 20963022 20963085 mdg3 18 246 6 63 '3-3 57.02 2.6 1.7 intergenic not near genes chr2L_6_20960001 chr2L_20960001 0.50 RAL-381 152 chr2L 21034683 21034749 hopper 1404 1411 11 66 '7-4 61.64 6.4 1.5 intron CG42238 - chr2L_11_21030001 chr2L_21030001 0.64 RAL-381 153 chr2L 21089167 21089230 flea 242 4762 4 63 '1-3 65.25 4.2 0.8 intergenic CG9259 +,ppk13 - chr2L_4_21085001 chr2L_21085001 0.25 RAL-381 154 chr2L 21191420 21191436 297 6596 6580 4 16 '1-3 69.67 5.0 0.7 intron Ret - chr2L_4_21190001 chr2L_21190001 0.25 RAL-381 155 chr2L 21285289 21285307 Tabor 7294 473 5 18 '3-2 61.08 8.4 0.5 intergenic not near genes chr2L_5_21285001 chr2L_21285001 0.60 RAL-381 156 chr2L 21378480 21378560 flea 4756 253 15 80 '12-3 66.23 4.1 2.9 intergenic CG8665 + chr2L_15_21375001 chr2L_21375001 0.80 RAL-381 157 chr2L 21396881 21396964 gypsy5 1 412 11 83 '5-6 63.41 5.9 1.6 intergenic not near genes chr2L_11_21395001 chr2L_21395001 0.45 RAL-381 158 chr2L 21687109 21687136 mariner2 864 891 4 27 '2-2 63.29 8.7 0.4 intron CG31619 + chr2L_4_21685001 chr2L_21685001 0.50 RAL-381 159 chr2L 21753713 21753767 P-element 2877 53 8 54 '3-5 44.88 7.2 1.0 5` UTR step - chr2L_8_21750001 chr2L_21750001 0.38 RAL-381 160 chr2L 21794803 21794851 1360 3377 17 10 48 '4-6 65.81 12.9 0.7 intron CG31612 - chr2L_10_21790001 chr2L_21790001 0.40 RAL-381 161 chr2L 22181970 22181999 Cr1a 4137 4166 5 29 '3-2 67.70 16.7 0.3 intron CG3635 + chr2L_5_22180001 chr2L_22180001 0.60 RAL-381 162 chr2L 23295811 23295854 micropia 5435 6 7 43 '3-4 60.56 5.5 1.1 intergenic not near genes chr2L_7_23295001 chr2L_23295001 0.43 RAL-381 163 chr2L 23299982 23300002 invader4 323 340 10 20 '7-3 57.64 11.2 0.8 intergenic not near genes chr2L_10_23295001 chr2L_23295001 0.70 RAL-381 164 chr2L 23313673 23313692 S-element 1707 1698 4 19 '3-1 62.74 4.6 0.7 intergenic CG40042 - chr2L_4_23310001 chr2L_23310001 0.75 RAL-381 165 chr2R 330128 330201 HMS-Beagle2 7191 5 13 73 '5-8 66.69 0.9 6.8 intergenic not near genes chr2R_13_330001 chr2R_330001 0.38 RAL-381 166 chr2R 503086 503138 gypsy 6987 435 8 52 '5-3 62.60 25.6 0.3 intron CG40378 + chr2R_8_500001 chr2R_500001 0.62 RAL-381 167 chr2R 977624 977695 Transpac 4922 5221 4 71 '2-2 68.33 2.2 1.2 intergenic not near genes chr2R_4_975001 chr2R_975001 0.50 RAL-381 168 chr2R 1000368 1000435 springer 7521 14 4 67 '3-1 63.68 2.5 1.1 intergenic not near genes chr2R_4_1000001 chr2R_1000001 0.75 RAL-381 169 chr2R 2009400 2009430 I-element 2 20 6 30 '2-4 73.60 0.3 4.6 intron CG17684 - chr2R_6_2005001 chr2R_2005001 0.33 RAL-381 170 chr2R 3146446 3146480 rover 318 176 8 34 '5-3 58.26 4.2 1.5 intron CG42596 + chr2R_8_3145001 chr2R_3145001 0.62 RAL-381 171 chr2R 3919665 3919681 1360 3382 23 7 16 '5-2 56.95 11.9 0.5 intron uex - chr2R_7_3915001 chr2R_3915001 0.71 RAL-381 172 chr2R 4578044 4578095 FB 17 9 6 51 '2-4 64.00 5.1 1.0 intergenic not near genes chr2R_6_4575001 chr2R_4575001 0.33 RAL-381 173 chr2R 5018801 5018817 rooA 34 50 4 16 '2-2 59.22 5.0 0.7 intron Ir41a + chr2R_4_5015001 chr2R_5015001 0.50 RAL-381 174 chr2R 5079213 5079277 flea 236 4755 6 64 '1-5 63.91 4.1 1.2 intergenic not near genes chr2R_6_5075001 chr2R_5075001 0.17 RAL-381 175 chr2R 5173187 5173209 Stalker4 386 409 4 22 '1-3 64.23 5.7 0.6 intergenic not near genes chr2R_4_5170001 chr2R_5170001 0.25 RAL-381 176 chr2R 5301726 5301793 1360 7 5 12 67 '2-10 66.33 2.8 3.2 intergenic not near genes chr2R_12_5300001 chr2R_5300001 0.17 RAL-381 177 chr2R 5303113 5303145 FB 228 260 5 32 '3-2 66.27 7.9 0.6 intergenic not near genes chr2R_5_5300001 chr2R_5300001 0.60 RAL-381 178 chr2R 5424268 5424284 1360 3333 3322 7 16 '2-5 62.27 9.2 0.7 intron laccase2 + chr2R_7_5420001 chr2R_5420001 0.29 RAL-381 179 chr2R 5485062 5485122 1360 3388 3377 5 60 '3-2 74.84 3.6 1.1 intron CG30440 - chr2R_5_5485001 chr2R_5485001 0.60 RAL-381 180 chr2R 5726506 5726572 P-element 2880 2886 10 66 '4-6 47.61 13.0 0.7 5` UTR ap - chr2R_10_5725001 chr2R_5725001 0.40 RAL-381 181 chr2R 5869084 5869165 Transpac 311 2 8 81 '7-1 66.50 5.5 1.2 intergenic not near genes chr2R_8_5865001 chr2R_5865001 0.88 RAL-381 182 chr2R 5935023 5935092 roo 400 8666 6 69 '3-3 63.24 5.2 1.0 intergenic not near genes chr2R_6_5935001 chr2R_5935001 0.50 RAL-381 183 chr2R 6196255 6196291 P-element 14 2881 5 36 '4-1 44.63 11.2 0.4 5` UTR Ptr - chr2R_5_6195001 chr2R_6195001 0.80 RAL-381 184 chr2R 6220443 6220514 P-element 1 2881 15 71 '11-4 51.87 9.6 1.4 intron bin3 + chr2R_15_6220001 chr2R_6220001 0.73 RAL-381 185 chr2R 6492918 6492989 copia 4880 257 6 71 '2-4 64.98 8.3 0.6 intergenic not near genes chr2R_6_6490001 chr2R_6490001 0.33 RAL-381 186 chr2R 6507164 6507223 roo 389 8665 9 59 '4-5 68.26 8.4 1.0 intron jing + chr2R_9_6505001 chr2R_6505001 0.44 RAL-381 187 chr2R 6565014 6565071 blood 7010 7386 9 57 '6-3 63.87 8.1 1.0 intron jing + chr2R_9_6565001 chr2R_6565001 0.67 RAL-381 188 chr2R 6623748 6623813 1360 3377 3387 11 65 '4-7 62.83 5.5 1.7 intergenic CG33919 - chr2R_11_6620001 chr2R_6620001 0.36 RAL-381 189 chr2R 6759120 6759195 copia 254 4872 7 75 '4-3 67.13 6.7 0.9 intergenic CG9436 - chr2R_7_6755001 chr2R_6755001 0.57 RAL-381 190 chr2R 6779775 6779844 17.6 7409 3 13 69 '3-10 70.93 7.2 1.6 intron,3` UTR Epac -,Cyp6a2 - chr2R_13_6775001 chr2R_6775001 0.23 RAL-381 191 chr2R 6796095 6796146 opus 7498 7022 4 51 '2-2 72.57 3.4 0.9 intron Epac - chr2R_4_6795001 chr2R_6795001 0.50 RAL-381 192 chr2R 6838014 6838084 blood 3 370 9 70 '4-5 64.13 4.4 1.7 3` UTR CG15236 + chr2R_9_6835001 chr2R_6835001 0.44 RAL-381 193 chr2R 6871178 6871238 FB 12 5 9 60 '2-7 63.63 6.0 1.3 intron coro - chr2R_9_6870001 chr2R_6870001 0.22 RAL-381 194 chr2R 6969182 6969237 FB 14 3 6 55 '3-3 59.62 6.7 0.8 intron,intron mim -,CheB42c - chr2R_6_6965001 chr2R_6965001 0.50 RAL-381 195 chr2R 6980334 6980378 roo 8684 396 6 44 '3-3 67.64 3.1 1.5 intron vimar - chr2R_6_6980001 chr2R_6980001 0.50 RAL-381 196 chr2R 7186926 7186960 jockey 4699 4667 8 34 '3-5 62.87 8.9 0.8 intron pk + chr2R_8_7185001 chr2R_7185001 0.38 RAL-381 197 chr2R 7735163 7735205 hopper 5 15 6 42 '3-3 70.90 8.5 0.6 5` UTR CG18812 - chr2R_6_7735001 chr2R_7735001 0.50 RAL-381 198 chr2R 8179869 8179954 mdg3 5250 248 14 85 '9-5 67.70 8.8 1.4 intron LRP1 + chr2R_14_8175001 chr2R_8175001 0.64 RAL-381 199 chr2R 8242826 8242897 1360 3386 5 17 71 '12-5 66.61 9.7 1.6 3` UTR CR44445 - chr2R_17_8240001 chr2R_8240001 0.71 RAL-381 200 chr2R 8289503 8289576 copia 255 4876 5 73 '2-3 65.87 2.7 1.4 intergenic not near genes chr2R_5_8285001 chr2R_8285001 0.40 RAL-381 201 chr2R 8378973 8379028 jockey 7 4987 8 55 '5-3 64.25 11.0 0.7 intron pdm3 + chr2R_8_8375001 chr2R_8375001 0.62 RAL-381 202 chr2R 8720158 8720186 Doc 26 7 12 28 '7-5 64.36 10.9 1.0 intron,exon CG14767 -,CG30357 - chr2R_12_8720001 chr2R_8720001 0.58 RAL-381 203 chr2R 8817307 8817391 springer 7525 7139 7 84 '5-2 66.62 8.1 0.8 intron sns + chr2R_7_8815001 chr2R_8815001 0.71 RAL-381 204 chr2R 8920398 8920461 roo 409 17 5 63 '4-1 69.76 8.4 0.5 3` UTR Spt - chr2R_5_8920001 chr2R_8920001 0.80 RAL-381 205 chr2R 9056173 9056189 jockey 4756 4775 4 16 '3-1 61.72 3.8 0.8 intron CG13743 - chr2R_4_9055001 chr2R_9055001 0.75 RAL-381 206 chr2R 9129351 9129367 S-element 1715 1699 6 16 '3-3 64.22 11.9 0.5 intron CG18659 - chr2R_6_9125001 chr2R_9125001 0.50 RAL-381 207 chr2R 9202236 9202311 HMS-Beagle 7037 6798 6 75 '2-4 63.11 4.1 1.2 intergenic not near genes chr2R_6_9200001 chr2R_9200001 0.33 RAL-381 208 chr2R 9324856 9324927 hopper 1408 1412 10 71 '4-6 69.44 6.9 1.3 intron,intron CG13739 -,CG13954 - chr2R_10_9320001 chr2R_9320001 0.40 RAL-381 209 chr2R 9378782 9378850 roo 8664 396 8 68 '4-4 66.33 2.8 2.1 intron CG13954 - chr2R_8_9375001 chr2R_9375001 0.50 RAL-381 210 chr2R 9384310 9384354 412 25 481 4 44 '3-1 67.34 2.9 1.0 intron CG13954 - chr2R_4_9380001 chr2R_9380001 0.75 RAL-381 211 chr2R 9408177 9408235 FB 1 15 14 58 '10-4 61.09 7.4 1.7 intron wun - chr2R_14_9405001 chr2R_9405001 0.71 RAL-381 212 chr2R 9419220 9419299 blood 377 7013 5 79 '4-1 68.27 2.6 1.4 intergenic not near genes chr2R_5_9415001 chr2R_9415001 0.80 RAL-381 213 chr2R 9458987 9459003 hobo 16 2 4 16 '2-2 63.70 5.4 0.6 intron Camta + chr2R_4_9455001 chr2R_9455001 0.50 RAL-381 214 chr2R 9594048 9594118 P-element 2 2881 13 70 '10-3 51.04 10.6 1.1 intron,5` UTR,5` UTR clos -,CG1902 +,CG30338 + chr2R_13_9590001 chr2R_9590001 0.77 RAL-381 215 chr2R 9684737 9684772 Juan 4029 4183 4 35 '3-1 66.00 4.9 0.7 intergenic not near genes chr2R_4_9680001 chr2R_9680001 0.75 RAL-381 216 chr2R 9739089 9739161 Tirant 400 5 12 72 '6-6 67.66 7.6 1.4 intron sqa - chr2R_12_9735001 chr2R_9735001 0.50 RAL-381 217 chr2R 9871005 9871073 roo 8676 407 10 68 '2-8 61.55 4.5 1.8 intron cbx - chr2R_10_9870001 chr2R_9870001 0.20 RAL-381 218 chr2R 9904556 9904621 roo 8677 406 11 65 '4-7 71.67 5.1 1.8 intergenic not near genes chr2R_11_9900001 chr2R_9900001 0.36 RAL-381 219 chr2R 9945442 9945467 jockey 4765 4787 10 25 '4-6 60.62 8.4 1.1 intron Mef2 - chr2R_10_9945001 chr2R_9945001 0.40 RAL-381 220 chr2R 10393801 10393828 I-element 456 483 7 27 '3-4 61.82 2.1 2.3 intron CG42732 - chr2R_7_10390001 chr2R_10390001 0.43 RAL-381 221 chr2R 10782075 10782105 P-element 2884 2854 4 30 '2-2 50.77 9.6 0.4 intron CG33144 - chr2R_4_10780001 chr2R_10780001 0.50 RAL-381 222 chr2R 10844635 10844698 mdg1 7040 7443 4 63 '1-3 68.90 7.0 0.5 intron CG30015 - chr2R_4_10840001 chr2R_10840001 0.25 RAL-381 223 chr2R 11049687 11049766 roo 8664 407 29 79 '13-16 65.92 7.6 3.4 intron luna - chr2R_29_11045001 chr2R_11045001 0.45 RAL-381 224 chr2R 11181099 11181165 Tirant 8491 1 24 66 '10-14 64.77 4.7 4.2 intron shn + chr2R_24_11180001 chr2R_11180001 0.42 RAL-381 225 chr2R 11202556 11202597 1360 3383 32 22 41 '12-10 68.92 9.6 2.1 intron shn + chr2R_22_11200001 chr2R_11200001 0.55 RAL-381 226 chr2R 11657596 11657672 S-element 1 7 17 76 '6-11 66.29 3.5 3.8 intron Roc2 - chr2R_17_11655001 chr2R_11655001 0.35 RAL-381 227 chr2R 11784261 11784341 pogo 2 2099 9 80 '2-7 70.19 3.5 2.0 intron ths + chr2R_9_11780001 chr2R_11780001 0.22 RAL-381 228 chr2R 12185338 12185406 accord 7372 2 20 68 '8-12 63.63 8.7 2.1 3` UTR,3` UTR CG13175 +,CG33964 + chr2R_20_12185001 chr2R_12185001 0.40 RAL-381 229 chr2R 12336604 12336649 pogo 2076 7 8 45 '4-4 73.90 4.9 1.4 intergenic CG34021 +,CG8490 + chr2R_8_12335001 chr2R_12335001 0.50 RAL-381 230 chr2R 12664758 12664780 Doc 14 4 11 22 '6-5 59.43 6.0 1.6 intron nemy - chr2R_11_12660001 chr2R_12660001 0.55 RAL-381 231 chr2R 13375830 13375871 Bari1 1692 29 4 41 '3-1 68.66 1.9 1.4 intergenic CG10814 - chr2R_4_13375001 chr2R_13375001 0.75 RAL-381 232 chr2R 13694075 13694152 roo 8670 411 4 77 '3-1 63.85 3.0 1.0 intron fas + chr2R_4_13690001 chr2R_13690001 0.75 RAL-381 233 chr2R 13865037 13865107 pogo 1 2091 7 70 '3-4 70.58 3.2 1.7 3` UTR shot - chr2R_7_13865001 chr2R_13865001 0.43 RAL-381 234 chr2R 14536413 14536484 roo 401 2 18 71 '12-6 63.30 4.3 3.4 intron ttv + chr2R_18_14535001 chr2R_14535001 0.67 RAL-381 235 chr2R 14766052 14766126 hopper 1414 1409 18 74 '12-6 63.99 5.1 3.0 intron Spred - chr2R_18_14765001 chr2R_14765001 0.67 RAL-381 236 chr2R 14769409 14769478 P-element 4 2882 15 69 '7-8 46.42 5.2 2.4 5` UTR Spred - chr2R_15_14765001 chr2R_14765001 0.47 RAL-381 237 chr2R 14848991 14849012 flea 4712 4687 5 21 '4-1 63.70 25.2 0.2 exon SMC2 - chr2R_5_14845001 chr2R_14845001 0.80 RAL-381 238 chr2R 14958648 14958682 jockey 4571 4605 8 34 '1-7 66.00 3.7 1.7 intron aPKC - chr2R_8_14955001 chr2R_14955001 0.12 RAL-381 239 chr2R 14985028 14985092 412 7543 17 11 64 '8-3 60.78 4.7 1.9 intron pcs + chr2R_11_14985001 chr2R_14985001 0.73 RAL-381 240 chr2R 15076989 15077071 roo 411 1 5 82 '4-1 68.72 3.4 1.1 intergenic not near genes chr2R_5_15075001 chr2R_15075001 0.80 RAL-381 241 chr2R 15082720 15082783 Tabor 7314 8 5 63 '2-3 61.79 4.2 1.0 intergenic not near genes chr2R_5_15080001 chr2R_15080001 0.40 RAL-381 242 chr2R 15206628 15206679 mdg1 9 7438 5 51 '1-4 66.93 1.6 1.9 3` UTR row - chr2R_5_15205001 chr2R_15205001 0.20 RAL-381 243 chr2R 15492131 15492203 roo 8664 400 15 72 '13-2 64.78 6.3 2.1 intron CG12964 - chr2R_15_15490001 chr2R_15490001 0.87 RAL-381 244 chr2R 15625499 15625579 blood 378 2 23 80 '17-6 64.41 7.3 2.8 intron CG42524 + chr2R_23_15625001 chr2R_15625001 0.74 RAL-381 245 chr2R 15880300 15880376 pogo 2099 2 20 76 '13-7 66.43 7.3 2.4 intron sli - chr2R_20_15880001 chr2R_15880001 0.65 RAL-381 246 chr2R 16020089 16020108 Stalker4 6989 14 4 19 '2-2 66.25 8.2 0.4 intron CG8399 + chr2R_4_16020001 chr2R_16020001 0.50 RAL-381 247 chr2R 16256016 16256050 jockey 4679 4713 20 34 '15-5 63.17 11.6 1.6 intron CngA - chr2R_20_16255001 chr2R_16255001 0.75 RAL-381 248 chr2R 16411584 16411631 hobo 2931 23 13 47 '4-9 67.60 7.3 1.6 intron Sema-2b + chr2R_13_16410001 chr2R_16410001 0.31 RAL-381 249 chr2R 16583974 16584048 P-element 2885 2886 13 74 '7-6 50.25 7.4 1.5 intron Cdk4 + chr2R_13_16580001 chr2R_16580001 0.54 RAL-381 250 chr2R 16806041 16806107 hobo 5 2932 17 66 '7-10 63.04 4.2 3.3 intergenic not near genes chr2R_17_16805001 chr2R_16805001 0.41 RAL-381 251 chr2R 17268760 17268818 FB 1 3 13 58 '6-7 54.27 4.8 2.2 intron mbl + chr2R_13_17265001 chr2R_17265001 0.46 RAL-381 252 chr2R 17421312 17421369 P-element 10 2877 15 57 '6-9 42.79 6.9 1.9 intron l(2)k01209 + chr2R_15_17420001 chr2R_17420001 0.40 RAL-381 253 chr2R 18123433 18123503 pogo 2090 3 15 70 '8-7 63.32 5.8 2.2 intron stau - chr2R_15_18120001 chr2R_18120001 0.53 RAL-381 254 chr2R 18348516 18348547 copia 4871 33 5 31 '1-4 70.65 3.1 1.2 intron sbb - chr2R_5_18345001 chr2R_18345001 0.20 RAL-381 255 chr2R 18379334 18379409 roo 8662 400 11 75 '7-4 67.38 1.7 4.1 intergenic not near genes chr2R_11_18375001 chr2R_18375001 0.64 RAL-381 256 chr2R 18584043 18584110 297 4 383 9 67 '7-2 64.45 1.7 3.3 intron GEFmeso - chr2R_9_18580001 chr2R_18580001 0.78 RAL-381 257 chr2R 18747957 18747978 blood 7179 7177 5 21 '4-1 60.00 10.6 0.4 intron Hs3st-A + chr2R_5_18745001 chr2R_18745001 0.80 RAL-381 258 chr2R 18807871 18807893 BS 5062 5085 4 22 '3-1 71.23 0.3 3.1 intergenic CG15096 - chr2R_4_18805001 chr2R_18805001 0.75 RAL-381 259 chr2R 19096909 19096987 flea 5013 4758 15 78 '6-9 66.66 4.9 2.5 intron 5-HT1A + chr2R_15_19095001 chr2R_19095001 0.40 RAL-381 260 chr2R 19254209 19254242 jockey 4706 4672 6 33 '3-3 69.55 8.0 0.7 intergenic not near genes chr2R_6_19250001 chr2R_19250001 0.50 RAL-381 261 chr2R 19357401 19357432 jockey 4694 4668 15 31 '7-8 61.22 6.4 2.0 intergenic CG11961 + chr2R_15_19355001 chr2R_19355001 0.47 RAL-381 262 chr2R 19405892 19405970 HMS-Beagle 2 246 12 78 '3-9 65.70 4.8 2.1 intron hts - chr2R_12_19405001 chr2R_19405001 0.25 RAL-381 263 chr2R 19677803 19677860 hobo 24 2708 14 57 '6-8 64.99 7.7 1.6 intergenic not near genes chr2R_14_19675001 chr2R_19675001 0.43 RAL-381 264 chr2R 19943337 19943390 roo 390 8673 7 53 '2-5 65.32 3.9 1.4 intergenic not near genes chr2R_7_19940001 chr2R_19940001 0.29 RAL-381 265 chr2R 21350327 21350398 roo 410 11 21 71 '15-6 64.65 6.5 2.8 exon CG17974 - chr2R_21_21350001 chr2R_21350001 0.71 RAL-381 266 chr2R 21357645 21357662 297 3 20 7 17 '4-3 63.62 4.1 1.4 intron cv-2 - chr2R_7_21355001 chr2R_21355001 0.57 RAL-381 267 chr2R 21357704 21357730 pogo 28 2 5 26 '3-2 64.93 2.4 1.5 intron cv-2 - chr2R_5_21355001 chr2R_21355001 0.60 RAL-381 268 chr2R 21415195 21415261 hopper 1406 3 21 66 '4-17 65.92 6.9 2.7 intron Sdc - chr2R_21_21415001 chr2R_21415001 0.19 RAL-381 269 chr2R 21437487 21437509 jockey 32 10 7 22 '4-3 64.74 4.0 1.4 intron Sdc - chr2R_7_21435001 chr2R_21435001 0.57 RAL-381 270 chr2R 21497901 21497946 P-element 10 2870 6 45 '3-3 30.19 1.3 2.6 5` UTR Fkbp14 - chr2R_6_21495001 chr2R_21495001 0.50 RAL-381 271 chr2R 22088208 22088283 roo 9062 8660 10 75 '3-7 64.93 0.9 5.3 intron CG13502 - chr2R_10_22085001 chr2R_22085001 0.30 RAL-381 272 chr2R 22362118 22362199 opus 7113 7496 13 81 '6-7 67.47 5.6 2.0 intron Liprin-gamma - chr2R_13_22360001 chr2R_22360001 0.46 RAL-381 273 chr2R 22441569 22441642 opus 498 110 12 73 '9-3 67.44 6.7 1.6 intergenic not near genes chr2R_12_22440001 chr2R_22440001 0.75 RAL-381 274 chr2R 23441715 23441743 jockey 7 35 14 28 '4-10 64.87 12.6 1.0 intergenic not near genes chr2R_14_23440001 chr2R_23440001 0.29 RAL-381 275 chr2R 23636187 23636267 Burdock 251 6134 26 80 '12-14 65.78 7.1 3.2 intron retn + chr2R_26_23635001 chr2R_23635001 0.46 RAL-381 276 chr2R 24299717 24299759 jockey 4984 6 18 42 '8-10 63.09 10.6 1.6 intergenic not near genes chr2R_18_24295001 chr2R_24295001 0.44 RAL-381 277 chr2R 24630984 24631051 P-element 2882 2881 16 67 '7-9 44.17 5.2 2.6 intron,3` UTR CG13594 -,CR43787 - chr2R_16_24630001 chr2R_24630001 0.44 RAL-381 278 chr2R 24967823 24967874 297 6956 6584 4 51 '1-3 68.56 4.3 0.8 intergenic RpL19 - chr2R_4_24965001 chr2R_24965001 0.25 RAL-381 279 chr3L 122386 122472 roo 8663 413 19 86 '8-11 66.93 7.2 2.3 intergenic not near genes chr3L_19_120001 chr3L_120001 0.42 RAL-381 280 chr3L 261810 261886 P-element 2886 2886 22 76 '12-10 47.53 9.7 2.1 intron,3` UTR Tudor-SN -,snoRNA:Psi18S-996 - chr3L_22_260001 chr3L_260001 0.55 RAL-381 281 chr3L 295129 295155 roo 8662 8688 8 26 '5-3 63.10 10.4 0.7 intron RhoGEF3 + chr3L_8_295001 chr3L_295001 0.62 RAL-381 282 chr3L 329952 330023 roo 8676 411 10 71 '4-6 66.61 3.0 2.5 intron,3` UTR Ptpmeg +,mthl9 - chr3L_10_325001 chr3L_325001 0.40 RAL-381 283 chr3L 380991 381071 S-element 1715 3 6 80 '1-5 66.22 2.2 1.9 intron trh - chr3L_6_380001 chr3L_380001 0.17 RAL-381 284 chr3L 566815 566896 copia 256 4869 11 81 '3-8 69.51 4.0 2.2 intron hipk + chr3L_11_565001 chr3L_565001 0.27 RAL-381 285 chr3L 2009427 2009449 jockey 34 12 13 22 '8-5 57.11 11.0 1.1 3` UTR CR44535 - chr3L_13_2005001 chr3L_2005001 0.62 RAL-381 286 chr3L 2309849 2309869 opus 14 7115 7 20 '3-4 63.71 5.2 1.1 intergenic not near genes chr3L_7_2305001 chr3L_2305001 0.43 RAL-381 287 chr3L 2322521 2322592 P-element 2885 4 12 71 '6-6 47.15 6.2 1.7 intergenic MsR1 + chr3L_12_2320001 chr3L_2320001 0.50 RAL-381 288 chr3L 2333039 2333059 jockey 4960 4979 8 20 '4-4 60.71 8.7 0.8 intron MsR1 + chr3L_8_2330001 chr3L_2330001 0.50 RAL-381 289 chr3L 2798644 2798717 jockey 4989 6 22 73 '3-19 65.98 2.8 5.8 intron CG43444 - chr3L_22_2795001 chr3L_2795001 0.14 RAL-381 290 chr3L 3540129 3540203 mdg3 247 5259 18 74 '11-7 62.83 3.7 3.8 intron Eip63E + chr3L_18_3540001 chr3L_3540001 0.61 RAL-381 291 chr3L 3589481 3589551 pogo 2098 9 7 70 '1-6 62.52 2.9 1.8 intron Eip63E + chr3L_7_3585001 chr3L_3585001 0.14 RAL-381 292 chr3L 3798584 3798629 1360 7 27 11 45 '7-4 65.75 4.0 2.2 intron CG32264 - chr3L_11_3795001 chr3L_3795001 0.64 RAL-381 293 chr3L 4056175 4056237 diver 204 5905 9 62 '1-8 64.41 0.7 5.3 intron CG1136 + chr3L_9_4055001 chr3L_4055001 0.11 RAL-381 294 chr3L 4744216 4744292 roo 404 8664 20 76 '12-8 65.61 6.5 2.7 intron RhoGEF64C + chr3L_20_4740001 chr3L_4740001 0.60 RAL-381 295 chr3L 4942940 4943014 copia 257 8 13 74 '6-7 67.76 5.3 2.1 intron Con - chr3L_13_4940001 chr3L_4940001 0.46 RAL-381 296 chr3L 5348332 5348409 pogo 2100 6 14 77 '7-7 74.12 1.8 5.0 intron lama - chr3L_14_5345001 chr3L_5345001 0.50 RAL-381 297 chr3L 5355311 5355376 P-element 2884 10 21 65 '12-9 48.27 7.2 2.6 intron lama - chr3L_21_5355001 chr3L_5355001 0.57 RAL-381 298 chr3L 5691104 5691177 P-element 2 2 17 73 '9-8 54.73 6.1 2.4 intron sif + chr3L_17_5690001 chr3L_5690001 0.53 RAL-381 299 chr3L 5918966 5919012 jockey 5 4968 20 46 '15-5 61.67 3.3 4.7 intron,5` UTR CG10483 -,CR45167 + chr3L_20_5915001 chr3L_5915001 0.75 RAL-381 300 chr3L 5966995 5967023 jockey 35 7 12 28 '7-5 62.63 4.4 2.2 intergenic not near genes chr3L_12_5965001 chr3L_5965001 0.58 RAL-381 301 chr3L 6588306 6588368 roo 8664 9053 13 62 '8-5 64.85 4.9 2.2 intron,intron CG18769 +,jv - chr3L_13_6585001 chr3L_6585001 0.62 RAL-381 302 chr3L 6590515 6590585 297 6965 6580 6 70 '3-3 65.16 1.9 2.1 intron CG18769 + chr3L_6_6590001 chr3L_6590001 0.50 RAL-381 303 chr3L 6907211 6907291 hobo 1 2708 23 80 '14-9 59.07 3.9 4.7 intergenic not near genes chr3L_23_6905001 chr3L_6905001 0.61 RAL-381 304 chr3L 7002647 7002681 Doc 16 3 18 34 '10-8 69.70 7.4 2.1 intron Mp + chr3L_18_7000001 chr3L_7000001 0.56 RAL-381 305 chr3L 7310904 7310966 hobo 2 2930 18 62 '16-2 63.31 8.8 1.8 intron unc-13-4A - chr3L_18_7310001 chr3L_7310001 0.89 RAL-381 306 chr3L 8060803 8060883 roo 8663 9070 23 80 '13-10 65.63 5.4 3.6 intergenic not near genes chr3L_23_8060001 chr3L_8060001 0.57 RAL-381 307 chr3L 8668633 8668653 Doc 8 8 12 20 '7-5 46.95 8.0 1.3 intergenic not near genes chr3L_12_8665001 chr3L_8665001 0.58 RAL-381 308 chr3L 8807737 8807802 springer 1 370 12 65 '7-5 61.23 6.8 1.5 exon CG32024 + chr3L_12_8805001 chr3L_8805001 0.58 RAL-381 309 chr3L 8996205 8996283 pogo 2098 1 21 78 '8-13 66.40 4.9 3.6 intron smg - chr3L_21_8995001 chr3L_8995001 0.38 RAL-381 310 chr3L 9305963 9306042 roo 8669 406 11 79 '5-6 68.54 4.1 2.2 intergenic not near genes chr3L_11_9305001 chr3L_9305001 0.45 RAL-381 311 chr3L 9442911 9442931 TAHRE 10074 10095 10 20 '7-3 65.62 11.5 0.8 intergenic CG33926 + chr3L_10_9440001 chr3L_9440001 0.70 RAL-381 312 chr3L 9907321 9907340 BS 5023 5002 6 19 '2-4 57.75 1.8 2.1 intergenic not near genes chr3L_6_9905001 chr3L_9905001 0.33 RAL-381 313 chr3L 10583583 10583616 roo 30 8661 9 33 '6-3 63.64 16.9 0.5 intron A2bp1 + chr3L_9_10580001 chr3L_10580001 0.67 RAL-381 314 chr3L 10626135 10626171 roo 411 9038 11 36 '3-8 69.14 11.2 0.9 intergenic CG34238 + chr3L_11_10625001 chr3L_10625001 0.27 RAL-381 315 chr3L 10692384 10692464 pogo 1 2100 19 80 '12-7 68.75 3.9 3.9 3` UTR CG11811 + chr3L_19_10690001 chr3L_10690001 0.63 RAL-381 316 chr3L 10694227 10694293 pogo 11 2094 9 66 '6-3 65.12 2.4 2.6 intergenic CG6463 -,NijA - chr3L_9_10690001 chr3L_10690001 0.67 RAL-381 317 chr3L 10963115 10963187 roo 5 405 20 72 '14-6 65.22 7.6 2.3 intergenic not near genes chr3L_20_10960001 chr3L_10960001 0.70 RAL-381 318 chr3L 10964534 10964608 412 6 7545 18 74 '6-12 62.83 7.1 2.2 intergenic not near genes chr3L_18_10960001 chr3L_10960001 0.33 RAL-381 319 chr3L 11819140 11819207 17.6 6940 7417 4 67 '2-2 64.00 1.7 1.5 intron CG5946 - chr3L_4_11815001 chr3L_11815001 0.50 RAL-381 320 chr3L 11844415 11844586 Quasimodo 4 7328 4 171 '1-3 68.33 4.3 0.8 intergenic not near genes chr3L_4_11840001 chr3L_11840001 0.25 RAL-381 321 chr3L 11907446 11907527 roo 409 8663 20 81 '13-7 60.55 7.1 2.5 intron CG44837 - chr3L_20_11905001 chr3L_11905001 0.65 RAL-381 322 chr3L 12199153 12199236 1731 25 4627 25 83 '6-19 64.93 6.2 3.5 intergenic CG11529 + chr3L_25_12195001 chr3L_12195001 0.24 RAL-381 323 chr3L 12308092 12308120 Tirant 394 366 13 28 '5-8 67.71 7.9 1.5 intergenic not near genes chr3L_13_12305001 chr3L_12305001 0.38 RAL-381 324 chr3L 13005887 13005959 hobo 2934 1 22 72 '6-16 66.47 6.0 3.1 intergenic not near genes chr3L_22_13005001 chr3L_13005001 0.27 RAL-381 325 chr3L 13143000 13143079 Burdock 6135 251 20 79 '15-5 66.22 4.7 3.5 intergenic not near genes chr3L_20_13140001 chr3L_13140001 0.75 RAL-381 326 chr3L 13652611 13652661 hobo 7 2920 10 50 '6-4 62.75 5.3 1.6 intron bru-3 - chr3L_10_13650001 chr3L_13650001 0.60 RAL-381 327 chr3L 13729187 13729211 jockey 9 33 13 24 '7-6 59.93 9.3 1.3 intron bru-3 - chr3L_13_13725001 chr3L_13725001 0.54 RAL-381 328 chr3L 14054866 14054938 FB 3 2 8 72 '4-4 65.11 5.2 1.3 intron CG32138 + chr3L_8_14050001 chr3L_14050001 0.50 RAL-381 329 chr3L 14271969 14272023 3S18 5770 6084 14 54 '9-5 64.68 3.3 3.3 intergenic not near genes chr3L_14_14270001 chr3L_14270001 0.64 RAL-381 330 chr3L 14572293 14572374 Tirant 404 8114 24 81 '13-11 63.56 6.1 3.4 intergenic not near genes chr3L_24_14570001 chr3L_14570001 0.54 RAL-381 331 chr3L 14717143 14717164 jockey 35 14 15 21 '10-5 61.46 6.8 1.9 intron ome + chr3L_15_14715001 chr3L_14715001 0.67 RAL-381 332 chr3L 15035136 15035208 pogo 2090 1 18 72 '6-12 68.89 4.6 3.2 intron Sytbeta - chr3L_18_15035001 chr3L_15035001 0.33 RAL-381 333 chr3L 15071009 15071042 X-element 4412 4390 10 33 '5-5 62.61 3.8 2.1 intron cp309 - chr3L_10_15070001 chr3L_15070001 0.50 RAL-381 334 chr3L 15099576 15099622 G4 3817 3803 4 46 '3-1 63.00 2.4 1.2 intron CTPsyn + chr3L_4_15095001 chr3L_15095001 0.75 RAL-381 335 chr3L 15690192 15690271 pogo 2100 3 10 79 '4-6 67.17 4.3 1.9 intron CG34451 - chr3L_10_15690001 chr3L_15690001 0.40 RAL-381 336 chr3L 15814930 15814949 G2 2980 2961 4 19 '3-1 63.67 1.1 1.9 intron fwe - chr3L_4_15810001 chr3L_15810001 0.75 RAL-381 337 chr3L 15919567 15919622 jockey 4983 11 16 55 '5-11 59.55 5.8 2.4 intron sff - chr3L_16_15915001 chr3L_15915001 0.31 RAL-381 338 chr3L 17078701 17078731 copia 4869 4899 11 30 '6-5 65.68 7.6 1.3 intron Rbp6 - chr3L_11_17075001 chr3L_17075001 0.55 RAL-381 339 chr3L 17181412 17181434 jockey 16 8 11 22 '6-5 60.49 10.0 1.0 intron Rbp6 - chr3L_11_17180001 chr3L_17180001 0.55 RAL-381 340 chr3L 17248642 17248715 roo 10 411 22 73 '8-14 68.56 6.9 2.8 intron CR43870 + chr3L_22_17245001 chr3L_17245001 0.36 RAL-381 341 chr3L 17379620 17379654 jockey 4668 4691 13 34 '7-6 62.00 8.2 1.4 intergenic Cad74A -,CG13728 - chr3L_13_17375001 chr3L_17375001 0.54 RAL-381 342 chr3L 17407179 17407205 jockey 4679 4705 8 26 '2-6 66.97 6.1 1.1 intron blot - chr3L_8_17405001 chr3L_17405001 0.25 RAL-381 343 chr3L 17625579 17625652 roo 4 408 10 73 '6-4 61.46 8.1 1.1 intron CG7510 + chr3L_10_17625001 chr3L_17625001 0.60 RAL-381 344 chr3L 17965015 17965083 P-element 2879 1 17 68 '7-10 45.31 5.4 2.7 intron Eip75B - chr3L_17_17965001 chr3L_17965001 0.41 RAL-381 345 chr3L 18020861 18020940 copia 4874 259 13 79 '5-8 65.44 3.2 3.1 intron Eip75B - chr3L_13_18020001 chr3L_18020001 0.38 RAL-381 346 chr3L 18080559 18080627 copia 245 2 10 68 '6-4 63.50 4.5 1.8 intergenic not near genes chr3L_10_18080001 chr3L_18080001 0.60 RAL-381 347 chr3L 18549632 18549708 blood 7012 7386 12 76 '6-6 65.41 6.5 1.6 intergenic not near genes chr3L_12_18545001 chr3L_18545001 0.50 RAL-381 348 chr3L 18655698 18655766 roo 8672 403 21 68 '6-15 69.70 3.8 4.4 intron MYPT-75D + chr3L_21_18655001 chr3L_18655001 0.29 RAL-381 349 chr3L 18818786 18818859 pogo 2092 2 7 73 '3-4 71.74 2.5 2.0 intron CG14073 - chr3L_7_18815001 chr3L_18815001 0.43 RAL-381 350 chr3L 19274805 19274830 transib2 6 30 6 25 '2-4 65.38 5.6 0.9 intergenic not near genes chr3L_6_19270001 chr3L_19270001 0.33 RAL-381 351 chr3L 19319936 19319961 I-element 5324 5347 4 25 '2-2 61.74 6.6 0.5 intron pip - chr3L_4_19315001 chr3L_19315001 0.50 RAL-381 352 chr3L 19339395 19339416 Tc1 34 8 5 21 '3-2 64.02 1.7 1.9 intergenic not near genes chr3L_5_19335001 chr3L_19335001 0.60 RAL-381 353 chr3L 19349946 19350000 1360 3384 3199 18 54 '13-5 66.72 5.1 3.0 intron CG32206 - chr3L_18_19345001 chr3L_19345001 0.72 RAL-381 354 chr3L 19784247 19784295 Juan 4 4199 24 48 '15-9 62.93 4.9 4.1 intron,intron CG42637 -,Gyc76C - chr3L_24_19780001 chr3L_19780001 0.62 RAL-381 355 chr3L 19951195 19951254 Ivk 1 5366 10 59 '6-4 67.79 3.7 2.1 intron Ac76E + chr3L_10_19950001 chr3L_19950001 0.60 RAL-381 356 chr3L 20079519 20079597 Transpac 307 4920 6 78 '3-3 67.86 4.0 1.2 intron sNPF-R - chr3L_6_20075001 chr3L_20075001 0.50 RAL-381 357 chr3L 20541800 20541822 jockey 15 13 5 22 '4-1 60.29 4.3 0.9 intergenic not near genes chr3L_5_20540001 chr3L_20540001 0.80 RAL-381 358 chr3L 21453376 21453450 hopper 3 1411 21 74 '10-11 68.83 6.5 2.8 intergenic not near genes chr3L_21_21450001 chr3L_21450001 0.48 RAL-381 359 chr3L 21636441 21636524 HMS-Beagle2 6883 7196 8 83 '5-3 67.01 3.7 1.7 intergenic ORMDL + chr3L_8_21635001 chr3L_21635001 0.62 RAL-381 360 chr3L 21696010 21696078 1360 6 5 25 68 '13-12 62.90 8.9 2.5 intron CG32447 - chr3L_25_21695001 chr3L_21695001 0.52 RAL-381 361 chr3L 21764684 21764768 412 2 498 18 84 '12-6 64.59 6.0 2.6 intron Syn1 - chr3L_18_21760001 chr3L_21760001 0.67 RAL-381 362 chr3L 21953291 21953360 S-element 1712 1713 5 69 '3-2 63.69 3.9 1.0 intergenic not near genes chr3L_5_21950001 chr3L_21950001 0.60 RAL-381 363 chr3L 22000373 22000456 297 6580 394 16 83 '8-8 69.82 4.1 3.1 intergenic not near genes chr3L_16_22000001 chr3L_22000001 0.50 RAL-381 364 chr3L 22050868 22050944 Transpac 5 309 14 76 '5-9 69.86 2.6 3.9 intron Oct-TyrR + chr3L_14_22050001 chr3L_22050001 0.36 RAL-381 365 chr3L 22399745 22399808 FB 9 3 13 63 '3-10 61.24 4.0 2.6 intron Ten-m - chr3L_13_22395001 chr3L_22395001 0.23 RAL-381 366 chr3L 22525845 22525874 Doc 14 3 11 29 '5-6 63.86 7.5 1.3 intergenic not near genes chr3L_11_22525001 chr3L_22525001 0.45 RAL-381 367 chr3L 22635693 22635756 hopper 1410 1407 20 63 '10-10 62.12 7.3 2.4 intron CG14459 - chr3L_20_22635001 chr3L_22635001 0.50 RAL-381 368 chr3L 22664749 22664835 flea 4754 257 16 86 '8-8 64.92 6.9 2.0 intergenic not near genes chr3L_16_22660001 chr3L_22660001 0.50 RAL-381 369 chr3L 22744678 22744701 FB 37 14 6 23 '3-3 74.44 3.3 1.4 intron CG7369 + chr3L_6_22740001 chr3L_22740001 0.50 RAL-381 370 chr3L 22824982 22825038 P-element 2 4 16 56 '6-10 43.98 6.6 2.1 intron jim - chr3L_16_22820001 chr3L_22820001 0.38 RAL-381 371 chr3L 22915112 22915166 copia 231 2 10 54 '2-8 64.76 3.3 2.3 intron CG12768 + chr3L_10_22915001 chr3L_22915001 0.20 RAL-381 372 chr3L 23146484 23146516 1360 3 35 21 32 '9-12 67.06 13.6 1.4 intergenic not near genes chr3L_21_23145001 chr3L_23145001 0.43 RAL-381 373 chr3L 23691159 23691240 Tirant 404 8111 14 81 '7-7 64.98 5.0 2.3 3` UTR CR45174 - chr3L_14_23690001 chr3L_23690001 0.50 RAL-381 374 chr3L 23866738 23866760 G-element 38 11 7 22 '3-4 63.09 0.0 7.0 intron CG40470 - chr3L_7_23865001 chr3L_23865001 0.43 RAL-381 375 chr3L 23933966 23933982 Cr1a 171 155 6 16 '3-3 62.67 1.5 2.4 intron CG40470 - chr3L_6_23930001 chr3L_23930001 0.50 RAL-381 376 chr3L 24272104 24272123 gypsy11 4022 4041 6 19 '3-3 73.49 6.8 0.8 intron Snap25 + chr3L_6_24270001 chr3L_24270001 0.50 RAL-381 377 chr3L 25162583 25162600 1360 3383 24 4 17 '3-1 59.87 12.0 0.3 intergenic not near genes chr3L_4_25160001 chr3L_25160001 0.75 RAL-381 378 chr3L 25162703 25162752 I-element 5347 5 13 49 '1-12 53.46 4.0 2.6 intergenic not near genes chr3L_13_25160001 chr3L_25160001 0.08 RAL-381 379 chr3L 25997523 25997569 copia 236 14 8 46 '2-6 67.90 3.7 1.7 intron CG40178 - chr3L_8_25995001 chr3L_25995001 0.25 RAL-381 380 chr3L 26350107 26350130 Quasimodo 326 7031 10 23 '3-7 48.54 12.7 0.7 intergenic not near genes chr3L_10_26350001 chr3L_26350001 0.30 RAL-381 381 chr3L 27727621 27727647 G-element 4309 4296 9 26 '3-6 58.12 3.7 1.9 intergenic not near genes chr3L_9_27725001 chr3L_27725001 0.33 RAL-381 382 chr3R 1540458 1540487 Tom1 332 361 4 29 '3-1 64.66 3.8 0.8 intergenic not near genes chr3R_4_1540001 chr3R_1540001 0.75 RAL-381 383 chr3R 2308185 2308216 1360 254 223 9 31 '6-3 65.10 7.8 1.0 intergenic not near genes chr3R_9_2305001 chr3R_2305001 0.67 RAL-381 384 chr3R 2533850 2533925 gypsy8 164 4811 4 75 '3-1 70.99 7.7 0.5 intergenic not near genes chr3R_4_2530001 chr3R_2530001 0.75 RAL-381 385 chr3R 2681818 2681873 Max-element 287 8237 10 55 '4-6 51.96 2.5 2.9 intron CG41056 - chr3R_10_2680001 chr3R_2680001 0.40 RAL-381 386 chr3R 2985400 2985474 HMS-Beagle 7035 6797 5 74 '3-2 64.00 3.2 1.2 intron CG42618 - chr3R_5_2985001 chr3R_2985001 0.60 RAL-381 387 chr3R 3620676 3620763 gypsy5 416 1 22 87 '13-9 61.34 6.1 3.1 intergenic not near genes chr3R_22_3620001 chr3R_3620001 0.59 RAL-381 388 chr3R 4622237 4622310 297 6587 394 7 73 '1-6 66.83 3.8 1.5 intron 5-HT2A + chr3R_7_4620001 chr3R_4620001 0.14 RAL-381 389 chr3R 4751514 4751593 hobo 2709 1 18 79 '5-13 65.54 6.5 2.4 intron,3` UTR atms +,CG44098 - chr3R_18_4750001 chr3R_4750001 0.28 RAL-381 390 chr3R 5098344 5098364 F-element 39 19 10 20 '5-5 59.97 5.2 1.6 intergenic not near genes chr3R_10_5095001 chr3R_5095001 0.50 RAL-381 391 chr3R 5122146 5122214 roo 408 12 24 68 '17-7 64.88 2.1 7.7 intergenic not near genes chr3R_24_5120001 chr3R_5120001 0.71 RAL-381 392 chr3R 5671388 5671464 1360 3388 3387 29 76 '18-11 66.43 6.8 3.7 intron Atg17 + chr3R_29_5670001 chr3R_5670001 0.62 RAL-381 393 chr3R 6088554 6088619 transib2 13 2821 4 65 '1-3 66.34 2.9 1.0 intergenic Gasp - chr3R_4_6085001 chr3R_6085001 0.25 RAL-381 394 chr3R 6763639 6763671 F-element 4463 4433 12 32 '7-5 64.67 5.5 1.8 intron Ama + chr3R_12_6760001 chr3R_6760001 0.58 RAL-381 395 chr3R 6803667 6803750 opus 498 112 15 83 '8-7 70.33 3.3 3.5 intergenic not near genes chr3R_15_6800001 chr3R_6800001 0.53 RAL-381 396 chr3R 6966484 6966509 pogo 28 4 5 25 '3-2 68.93 1.9 1.7 intron Antp - chr3R_5_6965001 chr3R_6965001 0.60 RAL-381 397 chr3R 7882300 7882373 mdg3 5254 240 6 73 '3-3 60.44 4.4 1.1 intron CG17816 - chr3R_6_7880001 chr3R_7880001 0.50 RAL-381 398 chr3R 8060311 8060387 roo 408 8668 7 76 '3-4 67.48 0.8 3.9 intron mAChR-B + chr3R_7_8060001 chr3R_8060001 0.43 RAL-381 399 chr3R 8459311 8459354 I-element 5333 3 18 43 '7-11 60.91 7.5 2.1 intron CG45263 - chr3R_18_8455001 chr3R_8455001 0.39 RAL-381 400 chr3R 8513729 8513809 roo 407 8663 23 80 '12-11 66.16 3.6 5.0 intergenic not near genes chr3R_23_8510001 chr3R_8510001 0.52 RAL-381 401 chr3R 8669540 8669611 P-element 4 1 23 71 '12-11 48.36 6.5 3.1 5` UTR CG8036 + chr3R_23_8665001 chr3R_8665001 0.52 RAL-381 402 chr3R 9032574 9032639 pogo 2093 11 13 65 '8-5 64.15 7.0 1.6 intron neur - chr3R_13_9030001 chr3R_9030001 0.62 RAL-381 403 chr3R 9181813 9181883 roo 409 8675 26 70 '16-10 67.08 5.0 4.3 intron pum - chr3R_26_9180001 chr3R_9180001 0.62 RAL-381 404 chr3R 9285480 9285503 jockey 25 10 18 23 '9-9 61.33 8.5 1.9 intergenic not near genes chr3R_18_9285001 chr3R_9285001 0.50 RAL-381 405 chr3R 9285898 9285917 BS 5084 5065 9 19 '6-3 57.12 9.6 0.8 intergenic not near genes chr3R_9_9285001 chr3R_9285001 0.67 RAL-381 406 chr3R 9813779 9813863 roo 410 8662 16 84 '7-9 66.72 7.9 1.8 3` UTR,exon CR44035 -,CG8534 + chr3R_16_9810001 chr3R_9810001 0.44 RAL-381 407 chr3R 10025425 10025499 pogo 2098 7 12 74 '10-2 64.43 4.6 2.1 intron Mical - chr3R_12_10025001 chr3R_10025001 0.83 RAL-381 408 chr3R 10042511 10042565 P-element 20 2883 12 54 '6-6 43.88 6.0 1.7 intron Mical - chr3R_12_10040001 chr3R_10040001 0.50 RAL-381 409 chr3R 10396354 10396431 roo 1 406 19 77 '14-5 65.34 6.8 2.4 intron cwo + chr3R_19_10395001 chr3R_10395001 0.74 RAL-381 410 chr3R 10424822 10424897 mdg3 240 5251 10 75 '2-8 62.84 3.4 2.3 intergenic not near genes chr3R_10_10420001 chr3R_10420001 0.20 RAL-381 411 chr3R 10541204 10541261 hobo 2931 13 14 57 '3-11 64.39 5.6 2.1 intron hth - chr3R_14_10540001 chr3R_10540001 0.21 RAL-381 412 chr3R 10769820 10769869 roo 9048 8672 12 49 '4-8 63.67 2.7 3.2 intron CG45076 - chr3R_12_10765001 chr3R_10765001 0.33 RAL-381 413 chr3R 10837592 10837667 roo 8666 410 14 75 '9-5 67.50 5.1 2.3 intron Cad86C + chr3R_14_10835001 chr3R_10835001 0.64 RAL-381 414 chr3R 11117920 11117950 jockey 4759 4789 21 30 '11-10 62.34 7.9 2.4 intergenic not near genes chr3R_21_11115001 chr3R_11115001 0.52 RAL-381 415 chr3R 11144979 11145056 copia 252 4869 13 77 '7-6 74.58 5.2 2.1 exon CheA86a - chr3R_13_11140001 chr3R_11140001 0.54 RAL-381 416 chr3R 11154859 11154931 1360 2 3385 16 72 '10-6 68.94 7.1 2.0 exon Ugt86Dc + chr3R_16_11150001 chr3R_11150001 0.62 RAL-381 417 chr3R 11163041 11163099 mdg1 405 7045 8 58 '5-3 68.00 3.3 1.9 exon CG4757 + chr3R_8_11160001 chr3R_11160001 0.62 RAL-381 418 chr3R 11286970 11287053 Tc3 240 240 4 83 '3-1 73.11 4.1 0.8 intron CR31386 - chr3R_4_11285001 chr3R_11285001 0.75 RAL-381 419 chr3R 11286976 11287047 1360 3385 4 21 71 '5-16 67.69 4.0 4.2 intron CR31386 - chr3R_21_11285001 chr3R_11285001 0.24 RAL-381 420 chr3R 11456261 11456337 1360 2 1 30 76 '20-10 67.31 8.2 3.3 intron,intron CG17230 +,PGRP-LB - chr3R_30_11455001 chr3R_11455001 0.67 RAL-381 421 chr3R 11526714 11526769 Burdock 5 6370 6 55 '5-1 68.81 5.0 1.0 intergenic not near genes chr3R_6_11525001 chr3R_11525001 0.83 RAL-381 422 chr3R 11569123 11569195 P-element 2882 1 15 72 '11-4 49.59 5.4 2.3 intergenic Mrp4 + chr3R_15_11565001 chr3R_11565001 0.73 RAL-381 423 chr3R 11815397 11815474 pogo 2097 2 14 77 '3-11 66.02 2.9 3.6 3` UTR glo - chr3R_14_11815001 chr3R_11815001 0.21 RAL-381 424 chr3R 12047416 12047482 Stalker2 7647 7254 23 66 '10-13 58.55 6.4 3.1 intergenic not near genes chr3R_23_12045001 chr3R_12045001 0.43 RAL-381 425 chr3R 12134449 12134486 diver 34 215 7 37 '2-5 66.48 1.2 3.2 intergenic not near genes chr3R_7_12130001 chr3R_12130001 0.29 RAL-381 426 chr3R 12199803 12199831 jockey 28 9 4 28 '2-2 66.53 8.8 0.4 intergenic CG3809 + chr3R_4_12195001 chr3R_12195001 0.50 RAL-381 427 chr3R 12599408 12599466 hopper 21 2 16 58 '3-13 62.53 4.3 3.0 intergenic not near genes chr3R_16_12595001 chr3R_12595001 0.19 RAL-381 428 chr3R 12787315 12787376 BS 5078 4737 22 61 '7-15 59.95 7.0 2.8 intergenic not near genes chr3R_22_12785001 chr3R_12785001 0.32 RAL-381 429 chr3R 13123408 13123492 blood 7010 379 24 84 '9-15 64.01 7.7 2.8 intron,3` UTR timeout +,2mit - chr3R_24_13120001 chr3R_13120001 0.38 RAL-381 430 chr3R 13198241 13198272 Doc 37 6 10 31 '4-6 66.72 3.3 2.3 intergenic not near genes chr3R_10_13195001 chr3R_13195001 0.40 RAL-381 431 chr3R 13477716 13477794 flea 257 4759 25 78 '10-15 69.29 3.0 6.2 intergenic not near genes chr3R_25_13475001 chr3R_13475001 0.40 RAL-381 432 chr3R 14013341 14013419 roo 8663 405 13 78 '5-8 70.27 3.6 2.8 intron rdx - chr3R_13_14010001 chr3R_14010001 0.38 RAL-381 433 chr3R 14139102 14139150 297 6942 1 12 48 '2-10 67.56 5.1 2.0 intergenic not near genes chr3R_12_14135001 chr3R_14135001 0.17 RAL-381 434 chr3R 14357337 14357364 Rt1b 5114 5141 7 27 '6-1 66.64 7.5 0.8 intron NK7.1 - chr3R_7_14355001 chr3R_14355001 0.86 RAL-381 435 chr3R 14962385 14962452 mdg1 420 7049 6 67 '3-3 62.66 3.3 1.4 intergenic not near genes chr3R_6_14960001 chr3R_14960001 0.50 RAL-381 436 chr3R 14977787 14977864 3S18 2 6104 10 77 '7-3 61.90 4.0 2.0 intergenic not near genes chr3R_10_14975001 chr3R_14975001 0.70 RAL-381 437 chr3R 15022125 15022202 hobo 4 2708 11 77 '7-4 66.96 7.2 1.3 intergenic not near genes chr3R_11_15020001 chr3R_15020001 0.64 RAL-381 438 chr3R 15325093 15325172 297 6973 1 8 79 '3-5 68.02 1.8 2.9 3` UTR ear + chr3R_8_15325001 chr3R_15325001 0.38 RAL-381 439 chr3R 15783234 15783299 springer 15 383 11 65 '8-3 65.84 5.6 1.7 intergenic not near genes chr3R_11_15780001 chr3R_15780001 0.73 RAL-381 440 chr3R 15943327 15943391 hobo 1 2929 24 64 '18-6 64.51 7.1 3.0 intron Sap47 + chr3R_24_15940001 chr3R_15940001 0.75 RAL-381 441 chr3R 17095861 17095949 HMS-Beagle2 6881 7199 13 88 '7-6 67.25 3.0 3.2 intron cher - chr3R_13_17095001 chr3R_17095001 0.54 RAL-381 442 chr3R 17243124 17243152 hopper 1412 31 11 28 '7-4 62.99 3.8 2.3 intron beat-IIb - chr3R_11_17240001 chr3R_17240001 0.64 RAL-381 443 chr3R 17458132 17458206 roo 8664 402 13 74 '5-8 67.20 2.8 3.4 intergenic not near genes chr3R_13_17455001 chr3R_17455001 0.38 RAL-381 444 chr3R 17936672 17936743 accord 7031 7032 4 71 '1-3 71.30 7.8 0.5 intron cpo + chr3R_4_17935001 chr3R_17935001 0.25 RAL-381 445 chr3R 18030732 18030757 17.6 7392 489 6 25 '3-3 68.17 2.5 1.7 intergenic not near genes chr3R_6_18030001 chr3R_18030001 0.50 RAL-381 446 chr3R 18207216 18207302 diver 229 5885 38 86 '22-16 65.87 8.5 4.0 intron CG7985 + chr3R_38_18205001 chr3R_18205001 0.58 RAL-381 447 chr3R 18297269 18297348 297 14 395 9 79 '1-8 67.85 2.2 2.8 intron l(3)05822 - chr3R_9_18295001 chr3R_18295001 0.11 RAL-381 448 chr3R 18699910 18699939 hopper 3 17 12 29 '6-6 63.22 10.7 1.0 intergenic not near genes chr3R_12_18695001 chr3R_18695001 0.50 RAL-381 449 chr3R 18715970 18716029 mdg3 232 5259 7 59 '4-3 66.43 4.0 1.4 intron,3` UTR Cha +,VAChT + chr3R_7_18715001 chr3R_18715001 0.57 RAL-381 450 chr3R 18934719 18934843 accord 185 7029 7 124 '5-2 56.10 5.1 1.1 intron CG42613 + chr3R_7_18930001 chr3R_18930001 0.71 RAL-381 451 chr3R 20264198 20264277 HMS-Beagle 6800 247 16 79 '8-8 65.75 4.9 2.7 intron cic + chr3R_16_20260001 chr3R_20260001 0.50 RAL-381 452 chr3R 20446330 20446398 pogo 5 2090 16 68 '10-6 62.35 9.2 1.6 intron Gfrl - chr3R_16_20445001 chr3R_20445001 0.62 RAL-381 453 chr3R 20529814 20529896 roo 8663 410 29 82 '17-12 65.96 7.9 3.3 intergenic not near genes chr3R_29_20525001 chr3R_20525001 0.59 RAL-381 454 chr3R 20731979 20732057 roo 3 409 30 78 '14-16 63.43 7.0 3.8 exon CG31205 + chr3R_30_20730001 chr3R_20730001 0.47 RAL-381 455 chr3R 20751046 20751106 297 2 6955 9 60 '8-1 68.41 4.5 1.6 intron CG42322 + chr3R_9_20750001 chr3R_20750001 0.89 RAL-381 456 chr3R 21011433 21011517 opus 7500 110 17 84 '8-9 68.22 9.3 1.7 intron Calx + chr3R_17_21010001 chr3R_21010001 0.47 RAL-381 457 chr3R 21603605 21603626 F-element 476 497 10 21 '2-8 58.28 12.6 0.7 intron InR - chr3R_10_21600001 chr3R_21600001 0.20 RAL-381 458 chr3R 22627170 22627257 Tirant 404 2 23 87 '12-11 65.90 7.2 2.8 intron loco - chr3R_23_22625001 chr3R_22625001 0.52 RAL-381 459 chr3R 22770014 22770092 blood 7384 7009 23 78 '6-17 64.40 7.3 2.8 intron,intron,exon CG7029 +,Usp12-46 +,CG43093 - chr3R_23_22770001 chr3R_22770001 0.26 RAL-381 460 chr3R 22894448 22894507 roo 9052 2 14 59 '3-11 66.59 4.0 2.8 intergenic not near genes chr3R_14_22890001 chr3R_22890001 0.21 RAL-381 461 chr3R 22930882 22930912 Max-element 8234 8266 10 30 '4-6 62.65 2.0 3.3 intron klg + chr3R_10_22930001 chr3R_22930001 0.40 RAL-381 462 chr3R 23079560 23079637 mdg1 7040 7457 10 77 '4-6 64.35 3.8 2.1 intron CG13830 - chr3R_10_23075001 chr3R_23075001 0.40 RAL-381 463 chr3R 23084800 23084875 hobo 1 2937 16 75 '8-8 63.69 6.1 2.3 intron CG13830 - chr3R_16_23080001 chr3R_23080001 0.50 RAL-381 464 chr3R 23242565 23242622 hopper 3 1394 9 57 '2-7 65.39 6.2 1.2 intron CG4467 - chr3R_9_23240001 chr3R_23240001 0.22 RAL-381 465 chr3R 23502049 23502132 roo 8663 409 16 83 '9-7 69.33 5.7 2.4 intergenic not near genes chr3R_16_23500001 chr3R_23500001 0.56 RAL-381 466 chr3R 23567002 23567075 mdg1 415 2 13 73 '7-6 63.48 3.6 2.8 intron beat-IV + chr3R_13_23565001 chr3R_23565001 0.54 RAL-381 467 chr3R 23913530 23913615 mdg3 5249 247 16 85 '9-7 66.64 6.0 2.3 intron sba - chr3R_16_23910001 chr3R_23910001 0.56 RAL-381 468 chr3R 24383184 24383256 opus 9 497 22 72 '4-18 62.77 5.2 3.5 3` UTR CG17780 - chr3R_22_24380001 chr3R_24380001 0.18 RAL-381 469 chr3R 24662841 24662877 jockey 4791 4757 9 36 '4-5 61.04 7.4 1.1 intron slo + chr3R_9_24660001 chr3R_24660001 0.44 RAL-381 470 chr3R 25354491 25354561 297 383 1 11 70 '4-7 69.70 5.6 1.7 intron Fur1 - chr3R_11_25350001 chr3R_25350001 0.36 RAL-381 471 chr3R 25567746 25567828 roo 1 411 11 82 '5-6 67.03 2.7 3.0 intron msi + chr3R_11_25565001 chr3R_25565001 0.45 RAL-381 472 chr3R 25764503 25764553 opus 8 489 8 50 '6-2 64.25 3.7 1.7 intergenic not near genes chr3R_8_25760001 chr3R_25760001 0.75 RAL-381 473 chr3R 25796041 25796057 BS 5024 5067 4 16 '2-2 65.58 4.6 0.7 intergenic not near genes chr3R_4_25795001 chr3R_25795001 0.50 RAL-381 474 chr3R 25880538 25880613 297 393 6 10 75 '4-6 70.32 1.8 3.6 intron Tsp96F - chr3R_10_25880001 chr3R_25880001 0.40 RAL-381 475 chr3R 25880805 25880848 Tirant 8503 10 8 43 '4-4 61.33 6.8 1.0 intron Tsp96F - chr3R_8_25880001 chr3R_25880001 0.50 RAL-381 476 chr3R 26108765 26108840 S-element 1 1706 7 75 '3-4 67.63 1.7 2.6 5` UTR CG31324 + chr3R_7_26105001 chr3R_26105001 0.43 RAL-381 477 chr3R 26292651 26292693 jockey 4979 8 14 42 '4-10 62.29 7.2 1.7 intergenic not near genes chr3R_14_26290001 chr3R_26290001 0.29 RAL-381 478 chr3R 26638162 26638238 Tirant 8120 404 19 76 '5-14 63.47 4.8 3.3 intergenic not near genes chr3R_19_26635001 chr3R_26635001 0.26 RAL-381 479 chr3R 26650728 26650788 flea 11 245 12 60 '7-5 66.47 4.0 2.4 intron beat-VII - chr3R_12_26650001 chr3R_26650001 0.58 RAL-381 480 chr3R 26733282 26733341 hopper 13 1407 11 59 '4-7 64.44 4.4 2.0 intergenic not near genes chr3R_11_26730001 chr3R_26730001 0.36 RAL-381 481 chr3R 26957950 26958026 pogo 2094 1 19 76 '8-11 68.48 5.9 2.8 intron CG6330 - chr3R_19_26955001 chr3R_26955001 0.42 RAL-381 482 chr3R 27137522 27137585 FB 7 7 13 63 '7-6 65.89 4.5 2.4 intron CG6051 - chr3R_13_27135001 chr3R_27135001 0.54 RAL-381 483 chr3R 27486666 27486736 hobo 4 2936 23 70 '19-4 64.01 8.7 2.4 intergenic not near genes chr3R_23_27485001 chr3R_27485001 0.83 RAL-381 484 chr3R 27508183 27508255 mdg1 3 7453 10 72 '2-8 61.95 2.8 2.6 intergenic not near genes chr3R_10_27505001 chr3R_27505001 0.20 RAL-381 485 chr3R 27896917 27896998 pogo 3 2098 19 81 '12-7 60.55 5.8 2.8 intron CG34353 - chr3R_19_27895001 chr3R_27895001 0.63 RAL-381 486 chr3R 27978198 27978266 roo 4 400 8 68 '2-6 68.50 2.6 2.2 intron betaTub97EF - chr3R_8_27975001 chr3R_27975001 0.25 RAL-381 487 chr3R 28230472 28230536 pogo 8 2089 21 64 '17-4 64.17 4.3 4.0 intron CG34354 + chr3R_21_28230001 chr3R_28230001 0.81 RAL-381 488 chr3R 28235760 28235785 jockey 4792 4768 7 25 '4-3 63.89 3.1 1.7 intron CG34354 + chr3R_7_28235001 chr3R_28235001 0.57 RAL-381 489 chr3R 28287746 28287772 jockey 7 32 16 26 '10-6 58.35 13.8 1.1 intergenic not near genes chr3R_16_28285001 chr3R_28285001 0.62 RAL-381 490 chr3R 28361842 28361909 412 14 7546 12 67 '6-6 59.21 4.5 2.2 intergenic not near genes chr3R_12_28360001 chr3R_28360001 0.50 RAL-381 491 chr3R 28594482 28594503 Tirant 8504 374 10 21 '4-6 65.39 10.9 0.8 intergenic CR43440 + chr3R_10_28590001 chr3R_28590001 0.40 RAL-381 492 chr3R 28804955 28804975 jockey 4685 4706 10 20 '3-7 68.82 9.1 1.0 intergenic not near genes chr3R_10_28800001 chr3R_28800001 0.30 RAL-381 493 chr3R 28938126 28938153 S-element 1714 1706 6 27 '4-2 64.57 0.6 3.8 intron CG14521 - chr3R_6_28935001 chr3R_28935001 0.67 RAL-381 494 chr3R 28940293 28940310 Rt1a 5061 5055 4 17 '2-2 57.99 12.8 0.3 intron CG14521 - chr3R_4_28940001 chr3R_28940001 0.50 RAL-381 495 chr3R 28965941 28966033 Tc3 319 237 9 92 '7-2 75.96 7.2 1.1 intron CG14521 - chr3R_9_28965001 chr3R_28965001 0.78 RAL-381 496 chr3R 28965955 28966027 1360 3383 3388 36 72 '16-20 68.07 7.6 4.2 intron CG14521 - chr3R_36_28965001 chr3R_28965001 0.44 RAL-381 497 chr3R 28986028 28986107 roo 3 410 25 79 '14-11 66.01 5.0 4.2 intergenic not near genes chr3R_25_28985001 chr3R_28985001 0.56 RAL-381 498 chr3R 29137749 29137827 Bari1 1704 4 17 78 '11-6 64.16 6.1 2.4 3` UTR Vha100-1 + chr3R_17_29135001 chr3R_29135001 0.65 RAL-381 499 chr3R 29189623 29189689 roo 397 3 17 66 '11-6 67.25 4.4 3.1 intron CG14509 - chr3R_17_29185001 chr3R_29185001 0.65 RAL-381 500 chr3R 29191630 29191649 Rt1a 5060 5059 4 19 '1-3 66.50 8.2 0.4 intron CG14509 - chr3R_4_29190001 chr3R_29190001 0.25 RAL-381 501 chr3R 29359376 29359414 hobo 2707 2931 10 38 '3-7 66.41 9.6 0.9 intergenic not near genes chr3R_10_29355001 chr3R_29355001 0.30 RAL-381 502 chr3R 29766504 29766541 jockey 4703 4666 7 37 '4-3 70.92 5.8 1.0 5` UTR kay + chr3R_7_29765001 chr3R_29765001 0.57 RAL-381 503 chr3R 30688048 30688111 mdg1 7054 419 6 63 '2-4 65.41 5.4 0.9 intergenic not near genes chr3R_6_30685001 chr3R_30685001 0.33 RAL-381 504 chr3R 30775719 30775770 hopper 2 1413 12 51 '9-3 62.72 4.9 2.0 intron zfh1 + chr3R_12_30775001 chr3R_30775001 0.75 RAL-381 505 chr3R 30803848 30803916 Transpac 4919 5227 9 68 '2-7 58.87 3.1 2.2 intron wts - chr3R_9_30800001 chr3R_30800001 0.22 RAL-381 506 chr3R 30835576 30835661 jockey 4995 4996 7 85 '3-4 66.77 6.0 1.0 intron CG15544 + chr3R_7_30835001 chr3R_30835001 0.43 RAL-381 507 chr3R 31311088 31311147 P-element 2882 14 9 59 '8-1 51.64 6.6 1.2 intergenic CG34347 + chr3R_9_31310001 chr3R_31310001 0.89 RAL-381 508 chr3R 31510567 31510598 I-element 9 5323 10 31 '5-5 66.59 5.0 1.7 intergenic not near genes chr3R_10_31510001 chr3R_31510001 0.50 RAL-381 509 chr3R 31667921 31667939 hopper 5 26 5 18 '3-2 62.77 6.6 0.7 intergenic not near genes chr3R_5_31665001 chr3R_31665001 0.60 RAL-381 510 chr3R 31800122 31800195 1360 3385 2 33 73 '14-19 69.73 8.0 3.7 3` UTR CG42233 - chr3R_33_31800001 chr3R_31800001 0.42 RAL-381 511 chr4 1076231 1076283 pogo 2091 21 10 52 '6-4 73.19 4.4 1.9 intergenic Rfabg + chr4_10_1075001 chr4_1075001 0.60 RAL-381 512 chrX 535610 535689 blood 7009 7389 22 79 '12-10 64.73 7.2 2.7 intron Appl + chrX_22_535001 chrX_535001 0.55 RAL-381 513 chrX 561915 561993 412 7544 1 17 78 '7-10 62.63 5.8 2.5 intron Appl + chrX_17_560001 chrX_560001 0.41 RAL-381 514 chrX 711749 711809 297 13 6966 5 60 '3-2 60.48 3.6 1.1 intron sdk + chrX_5_710001 chrX_710001 0.60 RAL-381 515 chrX 1236975 1237024 I-element 10 5344 5 49 '4-1 62.12 2.9 1.3 3` UTR CG11403 - chrX_5_1235001 chrX_1235001 0.80 RAL-381 516 chrX 1333828 1333906 Transpac 4917 5223 26 78 '6-20 62.21 5.6 3.9 intron CG11409 - chrX_26_1330001 chrX_1330001 0.23 RAL-381 517 chrX 1996092 1996121 I-element 5334 4874 11 29 '4-7 59.63 6.3 1.5 intron Hr4 + chrX_11_1995001 chrX_1995001 0.36 RAL-381 518 chrX 2087950 2088025 3S18 6101 5766 16 75 '5-11 61.28 6.3 2.2 intron Unc-76 + chrX_16_2085001 chrX_2085001 0.31 RAL-381 519 chrX 2266165 2266246 roo 410 1 18 81 '10-8 63.57 5.2 2.9 exon CG2924 - chrX_18_2265001 chrX_2265001 0.56 RAL-381 520 chrX 2293485 2293518 P-element 21 2865 9 33 '4-5 37.07 5.1 1.5 intergenic CG2865 - chrX_9_2290001 chrX_2290001 0.44 RAL-381 521 chrX 2642684 2642734 P-element 2864 5 6 50 '4-2 44.32 7.8 0.7 intron sgg + chrX_6_2640001 chrX_2640001 0.67 RAL-381 522 chrX 2678665 2678745 297 6581 392 13 80 '8-5 69.61 2.8 3.4 intergenic not near genes chrX_13_2675001 chrX_2675001 0.62 RAL-381 523 chrX 3283774 3283807 jockey 7 25 16 33 '9-7 60.23 7.0 2.0 intron dnc + chrX_16_3280001 chrX_3280001 0.56 RAL-381 524 chrX 3586205 3586269 roo 8666 397 13 64 '5-8 69.54 3.6 2.8 intron AstA-R1 + chrX_13_3585001 chrX_3585001 0.38 RAL-381 525 chrX 3738486 3738518 jockey 4676 4708 15 32 '6-9 60.40 9.8 1.4 intron tlk + chrX_15_3735001 chrX_3735001 0.40 RAL-381 526 chrX 4070178 4070249 HMS-Beagle 240 5 11 71 '2-9 65.23 4.3 2.1 intergenic not near genes chrX_11_4070001 chrX_4070001 0.18 RAL-381 527 chrX 4701148 4701194 P-element 10 2866 8 46 '5-3 42.77 3.7 1.7 3` UTR ctp + chrX_8_4700001 chrX_4700001 0.62 RAL-381 528 chrX 4723899 4723956 412 7519 3 4 57 '2-2 54.67 0.4 2.9 intron Proc-R + chrX_4_4720001 chrX_4720001 0.50 RAL-381 529 chrX 4738938 4739018 297 6972 6580 13 80 '5-8 69.20 2.0 4.3 intergenic not near genes chrX_13_4735001 chrX_4735001 0.38 RAL-381 530 chrX 5471972 5472052 pogo 2100 9 15 80 '6-9 65.77 3.3 3.5 intron SPR + chrX_15_5470001 chrX_5470001 0.40 RAL-381 531 chrX 5488738 5488820 blood 381 7013 11 82 '2-9 60.82 3.0 2.8 intron SPR + chrX_11_5485001 chrX_5485001 0.18 RAL-381 532 chrX 5549307 5549392 Tirant 399 8105 13 85 '9-4 64.30 4.9 2.2 intron Vsx2 - chrX_13_5545001 chrX_5545001 0.69 RAL-381 533 chrX 5754354 5754428 pogo 4 2095 9 74 '5-4 68.74 4.2 1.7 exon lin-52 - chrX_9_5750001 chrX_5750001 0.56 RAL-381 534 chrX 5868451 5868513 roo 22 412 12 62 '6-6 69.68 1.6 4.6 intergenic not near genes chrX_12_5865001 chrX_5865001 0.50 RAL-381 535 chrX 6121174 6121237 pogo 3 2085 8 63 '7-1 68.25 3.8 1.7 intron Ca-alpha1T - chrX_8_6120001 chrX_6120001 0.88 RAL-381 536 chrX 6333343 6333424 diver 5887 224 8 81 '4-4 67.78 4.2 1.5 intergenic CG42240 + chrX_8_6330001 chrX_6330001 0.50 RAL-381 537 chrX 6755731 6755758 transib4 152 179 19 27 '9-10 77.93 7.5 2.2 3` UTR CG14439 + chrX_19_6755001 chrX_6755001 0.47 RAL-381 538 chrX 6795895 6795957 297 6 380 8 62 '6-2 66.43 2.8 2.1 intron C3G - chrX_8_6795001 chrX_6795001 0.75 RAL-381 539 chrX 6798430 6798491 roo 392 2 9 61 '4-5 66.82 5.7 1.3 intron C3G - chrX_9_6795001 chrX_6795001 0.44 RAL-381 540 chrX 6927781 6927809 roo 8687 9042 5 28 '4-1 75.20 11.8 0.4 intron CG14431 + chrX_5_6925001 chrX_6925001 0.80 RAL-381 541 chrX 7035473 7035536 hobo 2927 2 15 63 '5-10 62.18 5.8 2.2 intron CG12541 - chrX_15_7035001 chrX_7035001 0.33 RAL-381 542 chrX 7290598 7290670 1360 3 4 19 72 '8-11 67.42 3.9 3.9 intron,intron,5` UTR CR44357 -,CG1677 -,unc-119 - chrX_19_7290001 chrX_7290001 0.42 RAL-381 543 chrX 7482428 7482480 jockey 4984 4726 12 52 '8-4 65.73 4.4 2.2 intergenic not near genes chrX_12_7480001 chrX_7480001 0.67 RAL-381 544 chrX 7806472 7806526 roo 9049 8665 7 54 '3-4 69.35 2.5 2.0 intergenic not near genes chrX_7_7805001 chrX_7805001 0.43 RAL-381 545 chrX 7995283 7995354 hobo 2936 1 9 71 '5-4 66.71 3.5 2.0 intergenic Tbh + chrX_9_7995001 chrX_7995001 0.56 RAL-381 546 chrX 8027477 8027494 Juan 12 5 5 17 '3-2 58.33 1.9 1.7 intergenic Tbh + chrX_5_8025001 chrX_8025001 0.60 RAL-381 547 chrX 8184681 8184742 hobo 8 2932 10 61 '5-5 64.81 3.9 2.0 intron sdt + chrX_10_8180001 chrX_8180001 0.50 RAL-381 548 chrX 8968306 8968390 Tirant 8105 8504 21 84 '11-10 64.53 4.3 4.0 intron rdgA + chrX_21_8965001 chrX_8965001 0.52 RAL-381 549 chrX 9650173 9650235 Juan 4029 4203 7 62 '4-3 66.58 3.5 1.6 intron l(1)G0232 - chrX_7_9650001 chrX_9650001 0.57 RAL-381 550 chrX 9860272 9860333 412 4 7530 12 61 '8-4 63.44 4.1 2.4 intergenic not near genes chrX_12_9860001 chrX_9860001 0.67 RAL-381 551 chrX 10112933 10112997 FB 17 3 4 64 '3-1 56.67 2.4 1.2 intron RhoU + chrX_4_10110001 chrX_10110001 0.75 RAL-381 552 chrX 10295602 10295679 roo 1 405 12 77 '5-7 68.44 3.6 2.6 intron alpha-Man-I - chrX_12_10295001 chrX_10295001 0.42 RAL-381 553 chrX 10297563 10297578 roo 9053 405 5 15 '2-3 65.33 13.0 0.4 intron alpha-Man-I - chrX_5_10295001 chrX_10295001 0.40 RAL-381 554 chrX 10568593 10568646 297 22 392 4 53 '3-1 76.13 1.8 1.4 intron spri - chrX_4_10565001 chrX_10565001 0.75 RAL-381 555 chrX 10644230 10644303 roo 8673 410 20 73 '5-15 68.32 3.9 4.1 intron X11Lbeta + chrX_20_10640001 chrX_10640001 0.25 RAL-381 556 chrX 10682893 10682914 pogo 3 27 4 21 '2-2 70.05 7.5 0.5 intron X11Lbeta + chrX_4_10680001 chrX_10680001 0.50 RAL-381 557 chrX 11039901 11039966 P-element 2886 2876 18 65 '14-4 46.05 3.6 3.9 5` UTR CG42339 - chrX_18_11035001 chrX_11035001 0.78 RAL-381 558 chrX 11054176 11054255 roo 406 8663 15 79 '5-10 67.73 3.8 3.1 intergenic not near genes chrX_15_11050001 chrX_11050001 0.33 RAL-381 559 chrX 11221697 11221767 pogo 7 2094 14 70 '7-7 69.26 1.5 5.6 intergenic not near genes chrX_14_11220001 chrX_11220001 0.50 RAL-381 560 chrX 11415813 11415865 roo 23 403 8 52 '4-4 71.19 1.0 4.0 5` UTR,3` UTR Gr10a -,Or10a - chrX_8_11415001 chrX_11415001 0.50 RAL-381 561 chrX 11450340 11450404 FB 1 12 11 64 '7-4 63.29 1.9 3.8 intron Evi5 - chrX_11_11450001 chrX_11450001 0.64 RAL-381 562 chrX 12045026 12045079 mdg1 7047 7458 9 53 '1-8 59.41 4.9 1.5 intron,intron CR43960 +,Ten-a + chrX_9_12045001 chrX_12045001 0.11 RAL-381 563 chrX 12138734 12138795 FB 9 7 11 61 '6-5 62.02 1.8 3.9 intron Ten-a + chrX_11_12135001 chrX_12135001 0.55 RAL-381 564 chrX 12351733 12351845 hopper 8 133 13 112 '12-1 61.91 2.9 3.3 intergenic not near genes chrX_13_12350001 chrX_12350001 0.92 RAL-381 565 chrX 12400708 12400786 Burdock 252 6136 8 78 '4-4 64.92 1.9 2.8 intergenic not near genes chrX_8_12400001 chrX_12400001 0.50 RAL-381 566 chrX 12404469 12404539 jockey 4673 4983 14 70 '11-3 62.25 3.4 3.2 intergenic CG32651 - chrX_14_12400001 chrX_12400001 0.79 RAL-381 567 chrX 12465774 12465833 hobo 5 2925 11 59 '8-3 65.41 3.3 2.6 intron CG42258 + chrX_11_12465001 chrX_12465001 0.73 RAL-381 568 chrX 13396783 13396841 P-element 48 2 7 58 '3-4 50.78 6.9 0.9 intergenic CG1673 +,CR44621 + chrX_7_13395001 chrX_13395001 0.43 RAL-381 569 chrX 13739817 13739867 P-element 2883 24 7 50 '3-4 42.54 12.7 0.5 intron,5` UTR Grip91 -,CG11151 + chrX_7_13735001 chrX_13735001 0.43 RAL-381 570 chrX 14121775 14121852 297 6974 4 6 77 '1-5 55.90 2.2 1.9 intergenic not near genes chrX_6_14120001 chrX_14120001 0.17 RAL-381 571 chrX 14520835 14520904 jockey 10 4989 22 69 '13-9 61.54 5.7 3.3 intergenic not near genes chrX_22_14520001 chrX_14520001 0.59 RAL-381 572 chrX 14576555 14576617 roo 8672 398 15 62 '11-4 63.06 5.3 2.4 intergenic not near genes chrX_15_14575001 chrX_14575001 0.73 RAL-381 573 chrX 14609545 14609620 roo 400 8661 11 75 '4-7 67.61 2.8 2.9 intron NetA - chrX_11_14605001 chrX_14605001 0.36 RAL-381 574 chrX 14612136 14612212 Transpac 5227 4923 6 76 '3-3 62.72 4.7 1.1 intron NetA - chrX_6_14610001 chrX_14610001 0.50 RAL-381 575 chrX 14830752 14830813 pogo 14 2092 6 61 '3-3 62.67 2.3 1.8 intron CG14408 - chrX_6_14830001 chrX_14830001 0.50 RAL-381 576 chrX 14841846 14841898 FB 8 16 9 52 '3-6 63.81 3.4 2.0 intron Flo2 + chrX_9_14840001 chrX_14840001 0.33 RAL-381 577 chrX 15025322 15025362 hobo 2909 8 8 40 '2-6 62.69 4.5 1.5 intron,intron hiw -,be + chrX_8_15025001 chrX_15025001 0.25 RAL-381 578 chrX 15150239 15150313 roo 8664 402 16 74 '10-6 61.72 6.0 2.3 intron CG9095 - chrX_16_15150001 chrX_15150001 0.62 RAL-381 579 chrX 15543160 15543238 297 1 391 9 78 '4-5 65.88 4.3 1.7 intron Ac13E - chrX_9_15540001 chrX_15540001 0.44 RAL-381 580 chrX 15614736 15614817 roo 8662 408 19 81 '7-12 67.71 4.8 3.3 intron sog - chrX_19_15610001 chrX_15610001 0.37 RAL-381 581 chrX 16265848 16265872 flea 256 4991 7 24 '4-3 57.14 2.9 1.8 intron CG12507 - chrX_7_16265001 chrX_16265001 0.57 RAL-381 582 chrX 16803363 16803438 P-element 1 2 25 75 '16-9 48.69 4.4 4.6 intergenic CG9125 -,CG13005 + chrX_25_16800001 chrX_16800001 0.64 RAL-381 583 chrX 17017582 17017673 TART-A 13110 13110 4 91 '2-2 62.79 2.9 1.0 intron CG45002 - chrX_4_17015001 chrX_17015001 0.50 RAL-381 584 chrX 17386899 17386980 springer 7138 7521 10 81 '6-4 65.01 3.2 2.4 intergenic not near genes chrX_10_17385001 chrX_17385001 0.60 RAL-381 585 chrX 18357631 18357670 jockey 4592 4984 9 39 '6-3 60.09 4.1 1.8 intergenic not near genes chrX_9_18355001 chrX_18355001 0.67 RAL-381 586 chrX 18534536 18534589 P-element 6 17 12 53 '7-5 44.90 6.3 1.6 intron Bx + chrX_12_18530001 chrX_18530001 0.58 RAL-381 587 chrX 18972130 18972206 roo 408 4 7 76 '3-4 65.10 2.1 2.3 intron CG43759 + chrX_7_18970001 chrX_18970001 0.43 RAL-381 588 chrX 19310281 19310335 jockey 4675 4977 10 54 '8-2 56.13 3.5 2.2 intergenic out - chrX_10_19310001 chrX_19310001 0.80 RAL-381 589 chrX 19316749 19316822 FB 2 1 20 73 '9-11 61.87 6.4 2.7 intron out - chrX_20_19315001 chrX_19315001 0.45 RAL-381 590 chrX 19722238 19722313 297 6971 6584 6 75 '2-4 65.78 2.0 2.0 intron CG12531 + chrX_6_19720001 chrX_19720001 0.33 RAL-381 591 chrX 19745689 19745711 Max-element 312 8524 6 22 '2-4 64.30 5.0 1.0 3` UTR,3` UTR CG33932 +,Rpp20 + chrX_6_19745001 chrX_19745001 0.33 RAL-381 592 chrX 19886942 19887149 P-element 2884 3 24 207 '12-12 51.77 4.3 4.5 intron,3` UTR Hers +,amn - chrX_24_19885001 chrX_19885001 0.50 RAL-381 593 chrX 20054482 20054502 opus 485 499 4 20 '3-1 68.00 8.7 0.4 intron Dop2R - chrX_4_20050001 chrX_20050001 0.75 RAL-381 594 chrX 20339583 20339643 Transpac 5219 5 15 60 '10-5 62.79 6.9 1.9 intergenic not near genes chrX_15_20335001 chrX_20335001 0.67 RAL-381 595 chrX 20391037 20391099 rover 7295 6968 4 62 '2-2 69.67 0.9 2.1 intergenic jb -,l(1)G0004 + chrX_4_20390001 chrX_20390001 0.50 RAL-381 596 chrX 20898405 20898463 297 6586 6957 10 58 '6-4 70.89 2.4 2.9 intron shakB - chrX_10_20895001 chrX_20895001 0.60 RAL-381 597 chrX 20995676 20995730 mdg3 5277 5496 7 54 '5-2 68.39 3.7 1.5 intergenic not near genes chrX_7_20995001 chrX_20995001 0.71 RAL-381 598 chrX 20999536 20999575 BS 5075 2 6 39 '1-5 60.06 1.9 2.1 intergenic not near genes chrX_6_20995001 chrX_20995001 0.17 RAL-381 599 chrX 21087589 21087612 mdg3 5260 5282 8 23 '2-6 65.94 2.9 2.1 intergenic not near genes chrX_8_21085001 chrX_21085001 0.25 RAL-381 600 chrX 21183320 21183381 S-element 1711 1712 16 61 '7-9 67.17 4.5 2.9 intergenic not near genes chrX_16_21180001 chrX_21180001 0.44 RAL-381 601 chrX 21204995 21205067 1360 9 4 7 72 '1-6 73.82 1.7 2.6 intergenic CG32521 - chrX_7_21200001 chrX_21200001 0.14 RAL-381 602 chrX 21270729 21270809 flea 4757 5013 7 80 '1-6 65.14 3.1 1.7 intron CG32521 - chrX_7_21270001 chrX_21270001 0.14 RAL-381 603 chrX 21399410 21399478 pogo 13 2098 14 68 '7-7 67.89 4.3 2.6 intergenic not near genes chrX_14_21395001 chrX_21395001 0.50 RAL-381 604 chrX 21587838 21587922 blood 7029 378 13 84 '4-9 65.81 2.1 4.2 intergenic not near genes chrX_13_21585001 chrX_21585001 0.31 RAL-381 605 chrX 21600422 21600447 rover 7296 7287 7 25 '5-2 59.87 2.5 2.0 intergenic CG14476 - chrX_7_21600001 chrX_21600001 0.71 RAL-381 606 chrX 21667898 21667924 gypsy2 6525 6499 6 26 '3-3 66.00 0.6 3.8 intergenic not near genes chrX_6_21665001 chrX_21665001 0.50 RAL-381 607 chrX 22442619 22442634 1360 3346 3355 4 15 '2-2 58.57 7.1 0.5 intergenic not near genes chrX_4_22440001 chrX_22440001 0.50 RAL-381 608 chrX 22545052 22545120 rover 9 342 6 68 '4-2 61.51 4.0 1.2 intergenic not near genes chrX_6_22545001 chrX_22545001 0.67 RAL-381 609 chrX 22794315 22794392 3S18 336 5764 11 77 '4-7 67.03 3.4 2.5 intron CR44997 + chrX_11_22790001 chrX_22790001 0.36 RAL-381 610 chrX 22845098 22845178 roo 407 8663 9 80 '6-3 66.37 2.2 2.8 intron,intron fog -,CG42346 + chrX_9_22845001 chrX_22845001 0.67 RAL-381 611 chrX 22916264 22916310 Transpac 21 5215 10 46 '3-7 64.03 3.9 2.0 intergenic not near genes chrX_10_22915001 chrX_22915001 0.30 RAL-381 612 chrY 3648865 3648885 springer 374 387 7 20 '3-4 65.64 0.7 4.1 intergenic not near genes chrY_7_3645001 chrY_3645001 0.43 RAL-381