SV#	Chr_5p	Chr_coord_5p_start	Chr_coord_5p_end	Chr_3p	Chr_coord_3p_start	Chr_coord_3p_end	repName	Reads_collapsed	avg_del_len	RefGen_3prime	Refgen_5prime	RefGen_Avg	Coverage_Ratio	size	Chr_5p	Chr_coord_5p	classification_5p	comment_5p	Chr_mid	Chr_coord_mid	classification_mid	comment_mid	Chr_3p	Chr_coord_3p	classification_3p	comment_3p	depletion_code	loci_code	libname
1	chr2L	47450	47484	chr2L	52572	52609	jockey	7	5121	7.5	3.0	5.2	1.1	5159	chr2L	47450	intron	Cda5 -	chr2L	50030	intron	Cda5 -	chr2L	52609	intron	Cda5 -	chr2L_7_50001	chr2L_50001	RAL-374
5	chr2L	347868	347918	chr2L	355388	355434	blood	11	7519	3.0	3.5	3.2	2.6	7566	chr2L	347868	3` UTR	Plc21C +	chr2L	351651	intron	Plc21C +	chr2L	355434	3` UTR	Plc21C +	chr2L_11_350001	chr2L_350001	RAL-374
12	chr2L	770453	770491	chr2L	772244	772292	Bari1	8	1796	2.0	2.5	2.2	2.5	1839	chr2L	770453	intergenic	not near genes	chr2L	771372	intergenic	not near genes	chr2L	772292	intergenic	CR44614 +	chr2L_8_770001	chr2L_770001	RAL-374
14	chr2L	996709	996718	chr2L	1005824	1005833	roo	4	9115	0.5	2.5	1.5	1.6	9124	chr2L	996709	intergenic	not near genes	chr2L	1001271	intergenic	not near genes	chr2L	1005833	intergenic	not near genes	chr2L_4_1000001	chr2L_1000001	RAL-374
18	chr2L	1220107	1220161	chr2L	1227593	1227645	blood	9	7484	1.0	1.5	1.2	4.1	7538	chr2L	1220107	intron	CG42329 +	chr2L	1223876	intron	CG42329 +	chr2L	1227645	intron	CG42329 +	chr2L_9_1220001	chr2L_1220001	RAL-374
24	chr2L	1570672	1570694	chr2L	1573564	1573584	F-element	4	2892	4.0	1.0	2.5	1.1	2912	chr2L	1570672	intron	haf +	chr2L	1572128	intron	haf +	chr2L	1573584	intron	haf +	chr2L_4_1570001	chr2L_1570001	RAL-374
28	chr2L	1678939	1678999	chr2L	1686441	1686484	blood	4	7498	0.0	4.5	2.2	1.2	7545	chr2L	1678939	intron	chinmo +	chr2L	1682712	intron	chinmo +	chr2L	1686484	intron	chinmo +	chr2L_4_1680001	chr2L_1680001	RAL-374
44	chr2L	2565545	2565563	chr2L	2571638	2571656	297	9	6093	1.5	7.5	4.5	1.6	6111	chr2L	2565545	exon	Cyp309a2 -	chr2L	2568600	intron	Cyp309a2 -	chr2L	2571656	exon	Cyp309a2 -	chr2L_9_2565001	chr2L_2565001	RAL-374
50	chr2L	3073020	3073055	chr2L	3078242	3078278	copia	14	5223	4.0	8.0	6.0	2.0	5258	chr2L	3073020	intron	toc -	chr2L	3075649	intron	toc -	chr2L	3078278	intron	toc -	chr2L_14_3075001	chr2L_3075001	RAL-374
53	chr2L	3202732	3202768	chr2L	3210181	3210215	mdg1	9	7448	2.5	0.5	1.5	3.6	7483	chr2L	3202732	intergenic	not near genes	chr2L	3206474	intergenic	not near genes	chr2L	3210215	intergenic	CR45336 +	chr2L_9_3205001	chr2L_3205001	RAL-374
54	chr2L	3251477	3251527	chr2L	3259062	3259112	springer	8	7585	2.0	2.0	2.0	2.7	7635	chr2L	3251477	intergenic	not near genes	chr2L	3255294	intergenic	not near genes	chr2L	3259112	intergenic	not near genes	chr2L_8_3255001	chr2L_3255001	RAL-374
57	chr2L	3388578	3388625	chr2L	3388839	3388885	pogo	8	261	3.5	2.0	2.8	2.1	307	chr2L	3388578	intergenic	CG42460 -	chr2L	3388732	intergenic	CG42460 -	chr2L	3388885	intergenic	CG42460 -,CR44791 +	chr2L_8_3385001	chr2L_3385001	RAL-374
64	chr2L	3649777	3649807	chr2L	3654998	3655028	copia	7	5222	0.0	3.0	1.5	2.8	5251	chr2L	3649777	intron	for -	chr2L	3652402	intron	for -	chr2L	3655028	intron	for -	chr2L_7_3650001	chr2L_3650001	RAL-374
75	chr2L	4601688	4601730	chr2L	4609146	4609191	mdg1	14	7460	5.5	1.5	3.5	3.1	7503	chr2L	4601688	intron	dp -	chr2L	4605440	intron	dp -	chr2L	4609191	intron	dp -	chr2L_14_4605001	chr2L_4605001	RAL-374
76	chr2L	4661823	4661854	chr2L	4669423	4669454	opus	4	7600	1.5	7.0	4.2	0.8	7631	chr2L	4661823	intergenic	not near genes	chr2L	4665638	intergenic	not near genes	chr2L	4669454	intergenic	not near genes	chr2L_4_4665001	chr2L_4665001	RAL-374
82	chr2L	4918155	4918193	chr2L	4923248	4923324	jockey	5	5108	4.5	0.5	2.5	1.4	5169	chr2L	4918155	intron	hoe1 -	chr2L	4920740	intron	hoe1 -	chr2L	4923324	intron	hoe1 -	chr2L_5_4920001	chr2L_4920001	RAL-374
84	chr2L	4953499	4953529	chr2L	4953759	4953773	pogo	6	257	3.0	2.0	2.5	1.7	274	chr2L	4953499	intergenic	Jon25Bii -	chr2L	4953636	intergenic	Jon25Bii -	chr2L	4953773	intergenic	not near genes	chr2L_6_4950001	chr2L_4950001	RAL-374
89	chr2L	5342758	5342796	chr2L	5345158	5345195	Doc	5	2400	2.5	6.5	4.5	0.9	2437	chr2L	5342758	intergenic	not near genes	chr2L	5343976	intergenic	not near genes	chr2L	5345195	intergenic	not near genes	chr2L_5_5340001	chr2L_5340001	RAL-374
97	chr2L	5827693	5827737	chr2L	5836720	5836764	roo	12	9023	4.0	1.5	2.8	3.2	9071	chr2L	5827693	intron	TrissinR +	chr2L	5832228	intron	TrissinR +	chr2L	5836764	intron	TrissinR +	chr2L_12_5830001	chr2L_5830001	RAL-374
109	chr2L	6363144	6363182	chr2L	6366071	6366124	Burdock	7	2936	3.5	2.5	3.0	1.8	2980	chr2L	6363144	intergenic	not near genes	chr2L	6364634	intergenic	not near genes	chr2L	6366124	intergenic	not near genes	chr2L_7_6360001	chr2L_6360001	RAL-374
111	chr2L	6426838	6426871	chr2L	6445118	6445151	roo	11	18280	3.0	4.5	3.8	2.3	18313	chr2L	6426838	3` UTR	CG9527 -	chr2L	6435994	intron	CG9527 -	chr2L	6445151	exon	CG9527 -	chr2L_11_6435001	chr2L_6435001	RAL-374
112	chr2L	6426877	6426887	chr2L	6445114	6445132	roo	5	18259	2.0	4.5	3.2	1.2	18255	chr2L	6426877	3` UTR	CG9527 -	chr2L	6436004	intron	CG9527 -	chr2L	6445132	exon	CG9527 -	chr2L_5_6435001	chr2L_6435001	RAL-374
128	chr2L	7343306	7343345	chr2L	7350439	7350464	roo	4	7131	4.0	4.0	4.0	0.8	7158	chr2L	7343306	intron	Wnt6 +	chr2L	7346885	intron	Wnt6 +	chr2L	7350464	intron	Wnt6 +	chr2L_4_7345001	chr2L_7345001	RAL-374
140	chr2L	7959026	7959056	chr2L	7960457	7960487	pogo	12	1427	4.5	5.0	4.8	2.1	1461	chr2L	7959026	intron	Snoo -	chr2L	7959756	intron	Snoo -	chr2L	7960487	intron	Snoo -	chr2L_12_7955001	chr2L_7955001	RAL-374
141	chr2L	8013601	8013608	chr2L	8018825	8018832	copia	5	5224	4.0	0.0	2.0	1.7	5231	chr2L	8013601	intron	Tg +	chr2L	8016216	intron	Tg +	chr2L	8018832	intron	Tg +	chr2L_5_8015001	chr2L_8015001	RAL-374
153	chr2L	8452402	8452428	chr2L	8461593	8461619	roo	10	9191	7.0	2.5	4.8	1.7	9217	chr2L	8452402	intron	fu12 -	chr2L	8457010	intron	fu12 -	chr2L	8461619	intron	fu12 -	chr2L_10_8455001	chr2L_8455001	RAL-374
158	chr2L	8723117	8723126	chr2L	8731514	8731521	Tirant	5	8396	4.0	6.5	5.2	0.8	8404	chr2L	8723117	intron	raw -	chr2L	8727319	intron	raw -	chr2L	8731521	intron	raw -	chr2L_5_8725001	chr2L_8725001	RAL-374
159	chr2L	8723128	8723137	chr2L	8731491	8731513	Tirant	4	8383	3.0	3.5	3.2	1.0	8385	chr2L	8723128	intron	raw -	chr2L	8727320	intron	raw -	chr2L	8731513	intron	raw -	chr2L_4_8725001	chr2L_8725001	RAL-374
164	chr2L	9000260	9000311	chr2L	9007790	9007824	roo	9	7528	4.0	0.5	2.2	2.8	7564	chr2L	9000260	intergenic	Try29F +	chr2L	9004042	intergenic	not near genes	chr2L	9007824	intergenic	not near genes	chr2L_9_9000001	chr2L_9000001	RAL-374
179	chr2L	9393480	9393519	chr2L	9396467	9396502	jockey	10	2986	5.5	4.5	5.0	1.7	3022	chr2L	9393480	intron	Shawl -	chr2L	9394991	intron	Shawl -	chr2L	9396502	intron	Shawl -	chr2L_10_9390001	chr2L_9390001	RAL-374
191	chr2L	9973717	9973749	chr2L	9980850	9980888	HMS-Beagle	9	7136	5.0	4.0	4.5	1.6	7171	chr2L	9973717	intergenic	not near genes	chr2L	9977302	intergenic	not near genes	chr2L	9980888	intergenic	not near genes	chr2L_9_9975001	chr2L_9975001	RAL-374
192	chr2L	9973751	9973758	chr2L	9980846	9980891	HMS-Beagle	4	7120	4.0	3.5	3.8	0.8	7140	chr2L	9973751	intergenic	not near genes	chr2L	9977321	intergenic	not near genes	chr2L	9980891	intergenic	not near genes	chr2L_4_9975001	chr2L_9975001	RAL-374
196	chr2L	10156302	10156337	chr2L	10163792	10163827	blood	8	7490	6.0	2.5	4.2	1.5	7525	chr2L	10156302	intron,3` UTR	CG44153 -,CG4839 +	chr2L	10160064	intron	CG44153 -	chr2L	10163827	intron	CG44153 -	chr2L_8_10160001	chr2L_10160001	RAL-374
203	chr2L	10592832	10592869	chr2L	10600514	10600551	opus	11	7681	1.0	4.5	2.8	2.9	7719	chr2L	10592832	intron	Trim9 +	chr2L	10596692	intron	Trim9 +	chr2L	10600551	intron	Trim9 +	chr2L_11_10595001	chr2L_10595001	RAL-374
212	chr2L	10862844	10862872	chr2L	10864465	10864506	Rt1c	7	1631	0.5	2.5	1.5	2.8	1662	chr2L	10862844	3` UTR	CR43807 -	chr2L	10863675	intron	CR43807 -	chr2L	10864506	3` UTR	CR43807 -	chr2L_7_10860001	chr2L_10860001	RAL-374
214	chr2L	10946938	10946966	chr2L	10956171	10956186	roo	4	9228	1.5	3.0	2.2	1.2	9248	chr2L	10946938	intron	dpr2 -	chr2L	10951562	intron	dpr2 -	chr2L	10956186	intron	dpr2 -	chr2L_4_10950001	chr2L_10950001	RAL-374
230	chr2L	11540570	11540612	chr2L	11547994	11548034	Tabor	4	7423	3.0	3.5	3.2	1.0	7464	chr2L	11540570	intergenic	not near genes	chr2L	11544302	intergenic	not near genes	chr2L	11548034	intergenic	not near genes	chr2L_4_11540001	chr2L_11540001	RAL-374
231	chr2L	11563620	11563664	chr2L	11568843	11568888	copia	12	5223	3.5	3.0	3.2	2.9	5268	chr2L	11563620	intergenic	not near genes	chr2L	11566254	intergenic	not near genes	chr2L	11568888	intergenic	not near genes	chr2L_12_11565001	chr2L_11565001	RAL-374
232	chr2L	11614073	11614085	chr2L	11615551	11615581	hopper2	4	1490	2.5	2.5	2.5	1.1	1508	chr2L	11614073	intron	kek2 +	chr2L	11614827	intron	kek2 +	chr2L	11615581	intron	kek2 +	chr2L_4_11610001	chr2L_11610001	RAL-374
235	chr2L	11713501	11713531	chr2L	11720984	11721013	blood	7	7485	4.0	3.5	3.8	1.5	7512	chr2L	11713501	intergenic	not near genes	chr2L	11717257	intergenic	not near genes	chr2L	11721013	intergenic	CR44143 +	chr2L_7_11715001	chr2L_11715001	RAL-374
240	chr2L	12067309	12067349	chr2L	12074381	12074419	297	14	7072	2.0	1.0	1.5	5.6	7110	chr2L	12067309	intergenic	not near genes	chr2L	12070864	intergenic	not near genes	chr2L	12074419	intergenic	not near genes	chr2L_14_12070001	chr2L_12070001	RAL-374
250	chr2L	12558311	12558346	chr2L	12565460	12565495	HMS-Beagle	5	7145	2.5	2.5	2.5	1.4	7184	chr2L	12558311	intergenic	not near genes	chr2L	12561903	intergenic	not near genes	chr2L	12565495	intergenic	not near genes	chr2L_5_12560001	chr2L_12560001	RAL-374
252	chr2L	12731039	12731081	chr2L	12735826	12735868	F-element	6	4787	2.5	3.5	3.0	1.5	4829	chr2L	12731039	intron	MRP +	chr2L	12733454	intron	MRP +	chr2L	12735868	intron	MRP +	chr2L_6_12730001	chr2L_12730001	RAL-374
253	chr2L	12739158	12739197	chr2L	12743959	12743998	Doc	8	4801	2.5	3.5	3.0	2.0	4840	chr2L	12739158	exon	MRP +	chr2L	12741578	intron	MRP +	chr2L	12743998	exon	MRP +	chr2L_8_12740001	chr2L_12740001	RAL-374
255	chr2L	12781793	12781812	chr2L	12789260	12789268	Quasimodo	5	7464	5.0	7.0	6.0	0.7	7475	chr2L	12781793	intergenic	not near genes	chr2L	12785530	intergenic	not near genes	chr2L	12789268	intergenic	not near genes	chr2L_5_12785001	chr2L_12785001	RAL-374
256	chr2L	12791588	12791627	chr2L	12795283	12795304	F-element	9	3688	1.5	4.0	2.8	2.4	3716	chr2L	12791588	intergenic	not near genes	chr2L	12793446	intergenic	not near genes	chr2L	12795304	intergenic	not near genes	chr2L_9_12790001	chr2L_12790001	RAL-374
259	chr2L	12861676	12861730	chr2L	12863163	12863172	hobo	4	1468	3.5	1.0	2.2	1.2	1496	chr2L	12861676	intergenic	not near genes	chr2L	12862424	intergenic	not near genes	chr2L	12863172	intergenic	not near genes	chr2L_4_12860001	chr2L_12860001	RAL-374
260	chr2L	12933834	12933883	chr2L	12941321	12941354	blood	7	7485	6.0	3.5	4.8	1.2	7520	chr2L	12933834	intergenic	not near genes	chr2L	12937594	intergenic	not near genes	chr2L	12941354	intergenic	not near genes	chr2L_7_12935001	chr2L_12935001	RAL-374
264	chr2L	13405634	13405683	chr2L	13410451	13410494	Doc	4	4816	2.5	5.5	4.0	0.8	4860	chr2L	13405634	exon	CG7110 +	chr2L	13408064	intron	CG7110 +	chr2L	13410494	intron	CG7110 +	chr2L_4_13405001	chr2L_13405001	RAL-374
265	chr2L	13449445	13449489	chr2L	13456901	13456945	Quasimodo	11	7455	1.0	4.5	2.8	2.9	7500	chr2L	13449445	intron,5` UTR	CG42784 +,Hsp60D -	chr2L	13453195	intron	CG42784 +	chr2L	13456945	intron	CG42784 +	chr2L_11_13450001	chr2L_13450001	RAL-374
266	chr2L	13481441	13481465	chr2L	13482068	13482075	jockey	4	622	2.5	5.0	3.8	0.8	634	chr2L	13481441	intron	CG42784 +	chr2L	13481758	intron	CG42784 +	chr2L	13482075	intron	CG42784 +	chr2L_4_13480001	chr2L_13480001	RAL-374
267	chr2L	13522113	13522161	chr2L	13527651	13527699	Transpac	9	5537	0.5	6.0	3.2	2.1	5586	chr2L	13522113	intron	B4 -	chr2L	13524906	intron	B4 -	chr2L	13527699	intron	B4 -	chr2L_9_13520001	chr2L_13520001	RAL-374
272	chr2L	13853079	13853108	chr2L	13862248	13862277	roo	6	9170	2.5	3.5	3.0	1.5	9198	chr2L	13853079	intron	CenG1A +	chr2L	13857678	intron	CenG1A +	chr2L	13862277	intron	CenG1A +	chr2L_6_13855001	chr2L_13855001	RAL-374
286	chr2L	14642560	14642580	chr2L	14651742	14651762	roo	6	9182	3.0	6.5	4.8	1.0	9202	chr2L	14642560	intron	osp -	chr2L	14647161	intron	osp -	chr2L	14651762	intron	osp -	chr2L_6_14645001	chr2L_14645001	RAL-374
290	chr2L	14803859	14803906	chr2L	14809082	14809105	copia	7	5216	3.5	2.0	2.8	1.8	5246	chr2L	14803859	intergenic	not near genes	chr2L	14806482	intergenic	not near genes	chr2L	14809105	intergenic	not near genes	chr2L_7_14805001	chr2L_14805001	RAL-374
297	chr2L	14984365	14984391	chr2L	14991987	14992013	opus	5	7622	5.0	4.0	4.5	0.9	7648	chr2L	14984365	intron	mol -	chr2L	14988189	intron	mol -	chr2L	14992013	intron	mol -	chr2L_5_14985001	chr2L_14985001	RAL-374
306	chr2L	15446031	15446073	chr2L	15453519	15453562	blood	4	7488	1.5	2.0	1.8	1.4	7531	chr2L	15446031	intergenic	not near genes	chr2L	15449796	intergenic	not near genes	chr2L	15453562	intergenic	not near genes	chr2L_4_15445001	chr2L_15445001	RAL-374
311	chr2L	15586390	15586425	chr2L	15593462	15593495	297	6	7072	2.5	0.0	1.2	2.7	7105	chr2L	15586390	intergenic	not near genes	chr2L	15589942	intergenic	not near genes	chr2L	15593495	intergenic	not near genes	chr2L_6_15585001	chr2L_15585001	RAL-374
314	chr2L	15956004	15956050	chr2L	15957491	15957523	hobo	13	1480	1.5	1.5	1.5	5.2	1519	chr2L	15956004	intron	beat-Ib -	chr2L	15956764	intron	beat-Ib -	chr2L	15957523	intron	beat-Ib -	chr2L_13_15955001	chr2L_15955001	RAL-374
316	chr2L	16071771	16071771	chr2L	16217659	16217661	copia	17	145889	9.5	16.0	12.8	1.2	145890	chr2L	16071771	intron	beat-Ia +	chr2L	16144716	intergenic	not near genes	chr2L	16217661	intergenic	not near genes	chr2L_17_16140001	chr2L_16140001	RAL-374
317	chr2L	16141149	16141187	chr2L	16146372	16146414	copia	5	5226	4.5	2.0	3.2	1.2	5265	chr2L	16141149	intergenic	not near genes	chr2L	16143782	intergenic	not near genes	chr2L	16146414	intergenic	not near genes	chr2L_5_16140001	chr2L_16140001	RAL-374
320	chr2L	16071771	16071771	chr2L	16217660	16217661	copia	14	145889	9.5	16.0	12.8	1.0	145890	chr2L	16071771	intron	beat-Ia +	chr2L	16144716	intergenic	not near genes	chr2L	16217661	intergenic	not near genes	chr2L_14_16140001	chr2L_16140001	RAL-374
324	chr2L	16280236	16280285	chr2L	16281427	16281474	1360	6	1182	1.0	2.5	1.8	2.1	1238	chr2L	16280236	intron	crp -	chr2L	16280855	intron	crp -	chr2L	16281474	intron	crp -	chr2L_6_16280001	chr2L_16280001	RAL-374
339	chr2L	17167547	17167576	chr2L	17167808	17167837	pogo	5	261	3.0	2.5	2.8	1.3	290	chr2L	17167547	intron,intron	CG34106 +,beat-IIIa +	chr2L	17167692	intron,intron	CG34106 +,beat-IIIa +	chr2L	17167837	intron,intron	CG34106 +,beat-IIIa +	chr2L_5_17165001	chr2L_17165001	RAL-374
343	chr2L	17273173	17273192	chr2L	17277976	17277988	F-element	4	4801	3.0	3.0	3.0	1.0	4815	chr2L	17273173	intergenic	not near genes	chr2L	17275580	intergenic	not near genes	chr2L	17277988	intergenic	not near genes	chr2L_4_17275001	chr2L_17275001	RAL-374
344	chr2L	17273203	17273225	chr2L	17277971	17278028	F-element	5	4796	1.5	3.0	2.2	1.6	4825	chr2L	17273203	intergenic	not near genes	chr2L	17275616	intergenic	not near genes	chr2L	17278028	intergenic	not near genes	chr2L_5_17275001	chr2L_17275001	RAL-374
349	chr2L	17335536	17335579	chr2L	17336722	17336730	1360	6	1180	0.0	3.5	1.8	2.1	1194	chr2L	17335536	intergenic	not near genes	chr2L	17336133	intergenic	not near genes	chr2L	17336730	intergenic	not near genes	chr2L_6_17335001	chr2L_17335001	RAL-374
361	chr2L	17819904	17819953	chr2L	17825127	17825170	copia	6	5218	1.5	3.0	2.2	1.9	5266	chr2L	17819904	intron	CadN2 -	chr2L	17822537	intron	CadN2 -	chr2L	17825170	intron	CadN2 -	chr2L_6_17820001	chr2L_17820001	RAL-374
367	chr2L	17911939	17911979	chr2L	17914137	17914177	pogo	5	2192	3.0	4.5	3.8	1.0	2238	chr2L	17911939	intergenic	not near genes	chr2L	17913058	intergenic	not near genes	chr2L	17914177	intergenic	CG43271 -	chr2L_5_17910001	chr2L_17910001	RAL-374
369	chr2L	17951928	17951974	chr2L	17953414	17953427	hobo	13	1484	3.0	6.5	4.8	2.2	1499	chr2L	17951928	intergenic	CR44398 -,CR44397 -	chr2L	17952678	intergenic	not near genes	chr2L	17953427	intergenic	not near genes	chr2L_13_17950001	chr2L_17950001	RAL-374
370	chr2L	18051862	18051902	chr2L	18061028	18061069	roo	7	9165	3.5	4.5	4.0	1.4	9207	chr2L	18051862	intron	rdo +	chr2L	18056466	intron	rdo +	chr2L	18061069	intron	rdo +	chr2L_7_18055001	chr2L_18055001	RAL-374
375	chr2L	18408014	18408044	chr2L	18412818	18412839	Doc	6	4802	7.5	4.0	5.8	0.9	4825	chr2L	18408014	intergenic	not near genes	chr2L	18410426	intergenic	not near genes	chr2L	18412839	intergenic	not near genes	chr2L_6_18410001	chr2L_18410001	RAL-374
385	chr2L	19147350	19147388	chr2L	19154404	19154443	297	5	7055	4.5	4.5	4.5	0.9	7093	chr2L	19147350	intron	brat +	chr2L	19150896	intron	brat +	chr2L	19154443	intron	brat +	chr2L_5_19150001	chr2L_19150001	RAL-374
389	chr2L	19345001	19345037	chr2L	19357230	19357266	blood	13	12226	6.5	3.0	4.8	2.2	12265	chr2L	19345001	intron	dnt -	chr2L	19351134	intron	dnt -	chr2L	19357266	intron	dnt -	chr2L_13_19350001	chr2L_19350001	RAL-374
395	chr2L	19620081	19620122	chr2L	19621090	19621130	jockey	5	1002	4.5	4.0	4.2	1.0	1049	chr2L	19620081	intron	Lar +	chr2L	19620606	intron	Lar +	chr2L	19621130	intron	Lar +	chr2L_5_19620001	chr2L_19620001	RAL-374
396	chr2L	19652556	19652594	chr2L	19674004	19674050	opus	7	21454	5.5	1.5	3.5	1.6	21494	chr2L	19652556	intron	Lar +	chr2L	19663303	intron	Lar +	chr2L	19674050	intron	Lar +	chr2L_7_19660001	chr2L_19660001	RAL-374
397	chr2L	19703521	19703564	chr2L	19712677	19712704	roo	9	9151	4.5	8.0	6.2	1.2	9183	chr2L	19703521	intron	Lar +	chr2L	19708112	intron	Lar +	chr2L	19712704	intron	Lar +	chr2L_9_19705001	chr2L_19705001	RAL-374
398	chr2L	19762799	19762825	chr2L	19763061	19763087	pogo	5	260	1.5	3.5	2.5	1.4	288	chr2L	19762799	5` UTR	fbp -	chr2L	19762943	intron	fbp -	chr2L	19763087	intron	fbp -	chr2L_5_19760001	chr2L_19760001	RAL-374
404	chr2L	20005850	20005896	chr2L	20010946	20010992	flea	4	5095	2.0	3.0	2.5	1.1	5142	chr2L	20005850	intron	CG43861 -	chr2L	20008421	intron	CG43861 -	chr2L	20010992	intron	CG43861 -	chr2L_4_20005001	chr2L_20005001	RAL-374
406	chr2L	20272101	20272129	chr2L	20282832	20282853	copia	10	10730	5.0	2.0	3.5	2.2	10752	chr2L	20272101	intergenic	not near genes	chr2L	20277477	intergenic	not near genes	chr2L	20282853	intergenic	not near genes	chr2L_10_20275001	chr2L_20275001	RAL-374
408	chr2L	20372203	20372255	chr2L	20372473	20372516	pogo	4	268	0.5	4.5	2.5	1.1	313	chr2L	20372203	intergenic	Ugt37a1 -	chr2L	20372360	intergenic	Ugt37a1 -	chr2L	20372516	exon	Ugt37a1 -	chr2L_4_20370001	chr2L_20370001	RAL-374
412	chr2L	20568647	20568676	chr2L	20569057	20569086	X-element	8	409	3.5	2.0	2.8	2.1	439	chr2L	20568647	intron	CR45347 +	chr2L	20568866	intron	CR45347 +	chr2L	20569086	intron	CR45347 +	chr2L_8_20565001	chr2L_20565001	RAL-374
414	chr2L	20576199	20576247	chr2L	20583687	20583734	blood	9	7488	4.5	2.5	3.5	2.0	7535	chr2L	20576199	intergenic	CR45347 +	chr2L	20579966	intergenic	not near genes	chr2L	20583734	3` UTR	CR44909 -	chr2L_9_20575001	chr2L_20575001	RAL-374
422	chr2L	20835792	20835829	chr2L	20836529	20836566	Quasimodo	8	737	2.5	3.0	2.8	2.1	774	chr2L	20835792	5` UTR	Oseg5 -	chr2L	20836179	intergenic	Oseg5 -,Spn38F -	chr2L	20836566	intergenic	Spn38F -	chr2L_8_20835001	chr2L_20835001	RAL-374
423	chr2L	20891515	20891544	chr2L	20896636	20896665	jockey	5	5121	4.5	2.5	3.5	1.1	5150	chr2L	20891515	intron,intron	CG43739 -,sky -	chr2L	20894090	intron,intron	CG43739 -,sky -	chr2L	20896665	intron,intron	CG43739 -,sky -	chr2L_5_20890001	chr2L_20890001	RAL-374
427	chr2L	20976637	20976665	chr2L	20981472	20981497	X-element	6	4834	5.5	4.5	5.0	1.0	4860	chr2L	20976637	intron	CG42238 -	chr2L	20979067	intron	CG42238 -	chr2L	20981497	intron	CG42238 -	chr2L_6_20975001	chr2L_20975001	RAL-374
429	chr2L	21020257	21020311	chr2L	21023954	21024008	NOF	6	3690	2.5	1.5	2.0	2.0	3751	chr2L	21020257	intron	CG42238 -	chr2L	21022132	intron	CG42238 -	chr2L	21024008	intron	CG42238 -	chr2L_6_21020001	chr2L_21020001	RAL-374
431	chr2L	21041127	21041164	chr2L	21049408	21049445	Tirant	10	8278	5.0	6.0	5.5	1.5	8318	chr2L	21041127	intron	CG42238 -	chr2L	21045286	intron	CG42238 -	chr2L	21049445	intron	CG42238 -	chr2L_10_21045001	chr2L_21045001	RAL-374
437	chr2L	21347543	21347581	chr2L	21355031	21355049	blood	4	7483	2.0	2.0	2.0	1.3	7506	chr2L	21347543	intron	Tsp39D +	chr2L	21351296	intron	Tsp39D +	chr2L	21355049	intron	Tsp39D +	chr2L_4_21350001	chr2L_21350001	RAL-374
439	chr2L	21597023	21597057	chr2L	21604787	21604820	roo	7	7764	1.0	3.5	2.2	2.2	7797	chr2L	21597023	intergenic	not near genes	chr2L	21600922	intergenic	not near genes	chr2L	21604820	intergenic	not near genes	chr2L_7_21600001	chr2L_21600001	RAL-374
445	chr2L	21981664	21981708	chr2L	21990849	21990889	roo	9	9181	1.0	7.5	4.2	1.7	9225	chr2L	21981664	exon	CG2528 -	chr2L	21986276	intron	CG2528 -	chr2L	21990889	exon	CG2528 -	chr2L_9_21985001	chr2L_21985001	RAL-374
452	chr2L	22548924	22548941	chr2L	22550169	22550186	1360	6	1245	0.5	8.0	4.2	1.2	1262	chr2L	22548924	intergenic	CG17490 +	chr2L	22549555	intergenic	not near genes	chr2L	22550186	intergenic	CG17493 +	chr2L_6_22545001	chr2L_22545001	RAL-374
455	chr2L	22679801	22679822	chr2L	22684569	22684613	F-element	6	4788	1.0	2.0	1.5	2.4	4812	chr2L	22679801	intron	CG40006 -	chr2L	22682207	intron	CG40006 -	chr2L	22684613	intron	CG40006 -	chr2L_6_22680001	chr2L_22680001	RAL-374
457	chr2L	22776404	22776448	chr2L	22778213	22778257	S-element	6	1809	1.0	2.5	1.8	2.1	1853	chr2L	22776404	intergenic	not near genes	chr2L	22777330	intergenic	not near genes	chr2L	22778257	intergenic	not near genes	chr2L_6_22775001	chr2L_22775001	RAL-374
459	chr2R	552783	552789	chr2R	553969	553985	1360	5	1200	1.0	3.5	2.2	1.6	1202	chr2R	552783	intron	CG40378 +	chr2R	553384	intron	CG40378 +	chr2R	553985	intron	CG40378 +	chr2R_5_550001	chr2R_550001	RAL-374
460	chr2R	1082376	1082382	chr2R	1087131	1087140	Doc	6	4770	4.0	5.0	4.5	1.1	4764	chr2R	1082376	intron	rl +	chr2R	1084758	intron	rl +	chr2R	1087140	intron	rl +	chr2R_6_1080001	chr2R_1080001	RAL-374
462	chr2R	1516585	1516600	chr2R	1521333	1521348	1731	8	4748	8.5	2.0	5.2	1.3	4763	chr2R	1516585	exon	Maf1 -	chr2R	1518966	intron	Maf1 -	chr2R	1521348	5` UTR	Maf1 -	chr2R_8_1515001	chr2R_1515001	RAL-374
467	chr2R	2498970	2499009	chr2R	2508137	2508176	roo	10	9167	4.5	3.0	3.8	2.1	9206	chr2R	2498970	intron	MFS17 -	chr2R	2503573	intron	MFS17 -	chr2R	2508176	intron	MFS17 -	chr2R_10_2500001	chr2R_2500001	RAL-374
473	chr2R	3532613	3532643	chr2R	3536076	3536106	Doc	4	3463	1.5	1.0	1.2	1.8	3493	chr2R	3532613	intergenic	not near genes	chr2R	3534360	intergenic	not near genes	chr2R	3536106	intergenic	not near genes	chr2R_4_3530001	chr2R_3530001	RAL-374
474	chr2R	4622965	4622983	chr2R	4624120	4624162	1360	5	1174	3.0	9.0	6.0	0.7	1197	chr2R	4622965	intergenic	CR44101 -	chr2R	4623564	intergenic	not near genes	chr2R	4624162	intergenic	not near genes	chr2R_5_4620001	chr2R_4620001	RAL-374
475	chr2R	4750324	4750367	chr2R	4751500	4751509	1360	10	1173	2.5	2.0	2.2	3.1	1185	chr2R	4750324	intron	conu +	chr2R	4750916	intron	conu +	chr2R	4751509	intron	conu +	chr2R_10_4750001	chr2R_4750001	RAL-374
478	chr2R	4838853	4838897	chr2R	4840395	4840440	transib2	9	1542	5.0	6.5	5.8	1.3	1587	chr2R	4838853	intergenic	not near genes	chr2R	4839646	intergenic	not near genes	chr2R	4840440	intergenic	not near genes	chr2R_9_4835001	chr2R_4835001	RAL-374
479	chr2R	4870726	4870742	chr2R	4871256	4871273	R1A1-element	6	530	4.0	2.0	3.0	1.5	547	chr2R	4870726	intergenic	not near genes	chr2R	4871000	intergenic	not near genes	chr2R	4871273	intergenic	not near genes	chr2R_6_4870001	chr2R_4870001	RAL-374
482	chr2R	5417986	5418024	chr2R	5420638	5420675	Burdock	9	2651	2.5	3.0	2.8	2.4	2689	chr2R	5417986	intron	laccase2 +	chr2R	5419330	intron	laccase2 +	chr2R	5420675	intron	laccase2 +	chr2R_9_5415001	chr2R_5415001	RAL-374
489	chr2R	5869255	5869304	chr2R	5874351	5874399	flea	14	5093	2.0	3.0	2.5	4.0	5144	chr2R	5869255	intergenic	not near genes	chr2R	5871827	intergenic	not near genes	chr2R	5874399	intergenic	not near genes	chr2R_14_5870001	chr2R_5870001	RAL-374
492	chr2R	5902145	5902163	chr2R	5909723	5909739	17.6	4	7578	1.5	1.5	1.5	1.6	7594	chr2R	5902145	intron	CG43366 +	chr2R	5905942	intron	CG43366 +	chr2R	5909739	intron	CG43366 +	chr2R_4_5905001	chr2R_5905001	RAL-374
501	chr2R	6494513	6494552	chr2R	6499294	6499333	F-element	5	4781	1.5	1.0	1.2	2.3	4820	chr2R	6494513	intergenic	not near genes	chr2R	6496923	intergenic	not near genes	chr2R	6499333	intergenic	not near genes	chr2R_5_6495001	chr2R_6495001	RAL-374
503	chr2R	6579781	6579803	chr2R	6584888	6584910	flea	6	5107	0.5	1.5	1.0	3.0	5129	chr2R	6579781	intron	jing +	chr2R	6582346	intron	jing +	chr2R	6584910	intron	jing +	chr2R_6_6580001	chr2R_6580001	RAL-374
508	chr2R	6952156	6952184	chr2R	6959756	6959784	opus	5	7600	2.5	1.0	1.8	1.8	7628	chr2R	6952156	intron,intron,exon	mim -,CheB42c -,ppk25 +	chr2R	6955970	intron,intron	mim -,CheB42c -	chr2R	6959784	intron,intron	mim -,CheB42c -	chr2R_5_6955001	chr2R_6955001	RAL-374
510	chr2R	7434879	7434903	chr2R	7439200	7439224	Juan	5	4321	4.5	6.0	5.2	0.8	4345	chr2R	7434879	intergenic	so +	chr2R	7437052	intergenic	not near genes	chr2R	7439224	intergenic	not near genes	chr2R_5_7435001	chr2R_7435001	RAL-374
512	chr2R	7608394	7608431	chr2R	7613617	7613654	I-element	6	5223	5.5	5.0	5.2	1.0	5260	chr2R	7608394	intron	CG1358 -	chr2R	7611024	intron	CG1358 -	chr2R	7613654	intron	CG1358 -	chr2R_6_7610001	chr2R_7610001	RAL-374
516	chr2R	7815654	7815688	chr2R	7822143	7822177	Burdock	14	6488	6.0	2.5	4.2	2.7	6523	chr2R	7815654	intergenic	CG1882 +	chr2R	7818916	intergenic	not near genes	chr2R	7822177	3` UTR	cathD -	chr2R_14_7815001	chr2R_7815001	RAL-374
517	chr2R	7869173	7869221	chr2R	7873979	7873983	Doc	12	4800	5.0	4.5	4.8	2.1	4810	chr2R	7869173	intron	Dgk -	chr2R	7871578	intron	Dgk -	chr2R	7873983	intron	Dgk -	chr2R_12_7870001	chr2R_7870001	RAL-374
526	chr2R	8160915	8160948	chr2R	8161025	8161046	1360	7	107	1.5	5.5	3.5	1.6	131	chr2R	8160915	exon	CG8708 -	chr2R	8160980	intron	CG8708 -	chr2R	8161046	intron	CG8708 -	chr2R_7_8160001	chr2R_8160001	RAL-374
528	chr2R	8330850	8330888	chr2R	8331356	8331394	roo	8	502	2.5	4.0	3.2	1.9	544	chr2R	8330850	intron	pdm3 +	chr2R	8331122	intron	pdm3 +	chr2R	8331394	intron	pdm3 +	chr2R_8_8330001	chr2R_8330001	RAL-374
535	chr2R	8722749	8722785	chr2R	8723007	8723032	pogo	12	254	5.5	3.5	4.5	2.2	283	chr2R	8722749	intron	CG14767 -	chr2R	8722890	intron	CG14767 -	chr2R	8723032	intron	CG14767 -	chr2R_12_8720001	chr2R_8720001	RAL-374
539	chr2R	9151292	9151327	chr2R	9157782	9157816	Burdock	6	6490	3.5	3.5	3.5	1.3	6524	chr2R	9151292	exon	CG30345 +	chr2R	9154554	intergenic	not near genes	chr2R	9157816	intergenic	CG8008 -	chr2R_6_9150001	chr2R_9150001	RAL-374
540	chr2R	9212673	9212716	chr2R	9213179	9213222	roo	9	502	3.5	1.5	2.5	2.6	549	chr2R	9212673	intergenic	CR45309 +	chr2R	9212948	intergenic	CR45309 +	chr2R	9213222	5` UTR	CR45309 +	chr2R_9_9210001	chr2R_9210001	RAL-374
546	chr2R	9480073	9480097	chr2R	9490624	9490648	roo	4	10551	2.5	0.5	1.5	1.6	10575	chr2R	9480073	intergenic	not near genes	chr2R	9485360	intergenic	not near genes	chr2R	9490648	intergenic	not near genes	chr2R_4_9485001	chr2R_9485001	RAL-374
551	chr2R	9726594	9726631	chr2R	9734165	9734202	17.6	6	7571	2.0	1.5	1.8	2.1	7608	chr2R	9726594	intron	sqa -	chr2R	9730398	intron	sqa -	chr2R	9734202	intron	sqa -	chr2R_6_9730001	chr2R_9730001	RAL-374
552	chr2R	9871031	9871070	chr2R	9871528	9871575	roo	4	504	0.0	2.5	1.2	1.8	544	chr2R	9871031	intron	cbx -	chr2R	9871303	intron	cbx -	chr2R	9871575	intron,5` UTR	cbx -,CG18446 +	chr2R_4_9870001	chr2R_9870001	RAL-374
554	chr2R	9945419	9945468	chr2R	9945634	9945680	BS	6	215	2.5	2.5	2.5	1.7	261	chr2R	9945419	intron	Mef2 -	chr2R	9945550	intron	Mef2 -	chr2R	9945680	intron	Mef2 -	chr2R_6_9945001	chr2R_9945001	RAL-374
559	chr2R	10005846	10005876	chr2R	10007031	10007038	1360	5	1170	5.0	3.0	4.0	1.0	1192	chr2R	10005846	intron	Pka-R2 -	chr2R	10006442	intron	Pka-R2 -	chr2R	10007038	intron	Pka-R2 -	chr2R_5_10005001	chr2R_10005001	RAL-374
575	chr2R	10622331	10622361	chr2R	10637116	10637146	mdg1	5	14785	0.5	2.0	1.2	2.3	14815	chr2R	10622331	intron	CG11883 +	chr2R	10629738	intron	CG11883 +	chr2R	10637146	intron	CG11883 +	chr2R_5_10625001	chr2R_10625001	RAL-374
581	chr2R	10948045	10948060	chr2R	10955580	10955606	17.6	4	7548	0.5	1.0	0.8	2.2	7561	chr2R	10948045	intergenic	not near genes	chr2R	10951826	intergenic	not near genes	chr2R	10955606	intergenic	not near genes	chr2R_4_10950001	chr2R_10950001	RAL-374
582	chr2R	11009798	11009839	chr2R	11018992	11019033	roo	7	9191	1.5	3.0	2.2	2.2	9235	chr2R	11009798	intron	luna -	chr2R	11014416	intron	luna -	chr2R	11019033	intron	luna -	chr2R_7_11010001	chr2R_11010001	RAL-374
585	chr2R	11134091	11134139	chr2R	11134352	11134400	pogo	7	261	2.5	1.5	2.0	2.3	309	chr2R	11134091	intergenic	not near genes	chr2R	11134246	intergenic	not near genes	chr2R	11134400	intergenic	not near genes	chr2R_7_11130001	chr2R_11130001	RAL-374
588	chr2R	11207798	11207834	chr2R	11208011	11208045	BS	6	211	2.0	5.5	3.8	1.2	247	chr2R	11207798	intron	shn +	chr2R	11207922	intron	shn +	chr2R	11208045	intron	shn +	chr2R_6_11205001	chr2R_11205001	RAL-374
593	chr2R	11415521	11415537	chr2R	11418690	11418702	opus	5	3167	0.5	7.5	4.0	1.0	3181	chr2R	11415521	intron	Drip -	chr2R	11417112	intron	Drip -	chr2R	11418702	intron	Drip -	chr2R_5_11415001	chr2R_11415001	RAL-374
595	chr2R	11472630	11472677	chr2R	11473845	11473879	pogo	14	1214	5.0	7.0	6.0	2.0	1249	chr2R	11472630	intergenic	not near genes	chr2R	11473254	intergenic	not near genes	chr2R	11473879	intergenic	not near genes	chr2R_14_11470001	chr2R_11470001	RAL-374
615	chr2R	12819433	12819476	chr2R	12824522	12824565	jockey	6	5088	1.5	1.5	1.5	2.4	5132	chr2R	12819433	intergenic	not near genes	chr2R	12821999	intergenic	not near genes	chr2R	12824565	intergenic	not near genes	chr2R_6_12820001	chr2R_12820001	RAL-374
619	chr2R	13136823	13136864	chr2R	13141639	13141682	Doc	10	4816	2.0	2.5	2.2	3.1	4859	chr2R	13136823	exon	Cap-G +	chr2R	13139252	intron	Cap-G +	chr2R	13141682	intron	Cap-G +	chr2R_10_13135001	chr2R_13135001	RAL-374
632	chr2R	13580506	13580527	chr2R	13580876	13580896	jockey	4	370	1.5	5.0	3.2	1.0	390	chr2R	13580506	3` UTR	CG6191 -	chr2R	13580701	3` UTR,3` UTR	CG6191 -,CG45088 -	chr2R	13580896	3` UTR,3` UTR	CG6191 -,CG45088 -	chr2R_4_13580001	chr2R_13580001	RAL-374
636	chr2R	13728117	13728158	chr2R	13735794	13735834	opus	6	7677	3.0	2.5	2.8	1.6	7717	chr2R	13728117	intron	fas +	chr2R	13731976	intron	fas +	chr2R	13735834	intron	fas +	chr2R_6_13730001	chr2R_13730001	RAL-374
639	chr2R	13905588	13905626	chr2R	13907590	13907609	Rt1a	5	1994	4.0	3.5	3.8	1.0	2021	chr2R	13905588	intron	shot -	chr2R	13906598	intron	shot -	chr2R	13907609	intron	shot -	chr2R_5_13905001	chr2R_13905001	RAL-374
644	chr2R	14467291	14467326	chr2R	14476467	14476489	roo	11	9176	1.0	2.0	1.5	4.4	9198	chr2R	14467291	intergenic	not near genes	chr2R	14471890	intergenic	not near genes	chr2R	14476489	5` UTR	CR44462 +	chr2R_11_14470001	chr2R_14470001	RAL-374
645	chr2R	14497375	14497417	chr2R	14498557	14498602	1360	6	1183	0.0	2.0	1.0	3.0	1227	chr2R	14497375	3` UTR	Cpsf160 -	chr2R	14497988	intron	Cpsf160 -	chr2R	14498602	3` UTR	Cpsf160 -	chr2R_6_14495001	chr2R_14495001	RAL-374
654	chr2R	14889194	14889221	chr2R	14897822	14897844	Max-element	6	8627	4.0	0.5	2.2	1.9	8650	chr2R	14889194	intergenic	Cyp6a8 -	chr2R	14893519	intergenic	not near genes	chr2R	14897844	intergenic	not near genes	chr2R_6_14890001	chr2R_14890001	RAL-374
658	chr2R	15004708	15004750	chr2R	15005057	15005096	jockey	5	348	6.0	5.5	5.8	0.7	388	chr2R	15004708	intergenic	not near genes	chr2R	15004902	intergenic	not near genes	chr2R	15005096	intergenic	not near genes	chr2R_5_15000001	chr2R_15000001	RAL-374
659	chr2R	15015460	15015486	chr2R	15022888	15022930	mdg1	8	7440	2.5	4.0	3.2	1.9	7470	chr2R	15015460	intron	hbs +	chr2R	15019195	intron	hbs +	chr2R	15022930	intron	hbs +	chr2R_8_15015001	chr2R_15015001	RAL-374
662	chr2R	15084961	15085003	chr2R	15092030	15092072	297	5	7067	2.5	5.5	4.0	1.0	7111	chr2R	15084961	intergenic	not near genes	chr2R	15088516	intergenic	not near genes	chr2R	15092072	5` UTR	CR44457 +	chr2R_5_15085001	chr2R_15085001	RAL-374
664	chr2R	15119297	15119347	chr2R	15127797	15127847	Tirant	12	8497	6.0	4.5	5.2	1.9	8550	chr2R	15119297	intron	chn +	chr2R	15123572	intron	chn +	chr2R	15127847	intron	chn +	chr2R_12_15120001	chr2R_15120001	RAL-374
686	chr2R	16539622	16539655	chr2R	16544851	16544884	copia	7	5229	1.0	1.0	1.0	3.5	5262	chr2R	16539622	intergenic	not near genes	chr2R	16542253	intergenic	not near genes	chr2R	16544884	intergenic	not near genes	chr2R_7_16540001	chr2R_16540001	RAL-374
705	chr2R	17147225	17147263	chr2R	17152275	17152313	jockey	12	5050	3.5	5.5	4.5	2.2	5088	chr2R	17147225	intergenic	not near genes	chr2R	17149769	intergenic	not near genes	chr2R	17152313	intergenic	not near genes	chr2R_12_17145001	chr2R_17145001	RAL-374
708	chr2R	17236497	17236536	chr2R	17241721	17241760	copia	11	5223	4.0	4.0	4.0	2.2	5263	chr2R	17236497	intron	mbl +	chr2R	17239128	intron	mbl +	chr2R	17241760	intron	mbl +	chr2R_11_17235001	chr2R_17235001	RAL-374
712	chr2R	17485896	17485946	chr2R	17490686	17490734	F-element	5	4789	2.0	1.5	1.8	1.8	4838	chr2R	17485896	5` UTR,intron	CG43110 -,NT5E-2 +	chr2R	17488315	intron	NT5E-2 +	chr2R	17490734	intron	NT5E-2 +	chr2R_5_17485001	chr2R_17485001	RAL-374
715	chr2R	17782350	17782393	chr2R	17783573	17783616	pogo	4	1223	1.5	3.0	2.2	1.2	1266	chr2R	17782350	intergenic	CG33981 -,fab1 -	chr2R	17782983	intergenic	not near genes	chr2R	17783616	intergenic	mir-31a -	chr2R_4_17780001	chr2R_17780001	RAL-374
716	chr2R	17784026	17784033	chr2R	17784285	17784292	pogo	4	258	4.0	3.0	3.5	0.9	266	chr2R	17784026	intergenic	mir-31a -	chr2R	17784159	intergenic	mir-31a -	chr2R	17784292	intergenic	mir-31a -	chr2R_4_17780001	chr2R_17780001	RAL-374
720	chr2R	18045658	18045671	chr2R	18046030	18046043	jockey	4	372	4.0	1.5	2.8	1.1	385	chr2R	18045658	intergenic	not near genes	chr2R	18045850	intergenic	not near genes	chr2R	18046043	intergenic	CG5767 -	chr2R_4_18045001	chr2R_18045001	RAL-374
727	chr2R	18358376	18358406	chr2R	18372607	18372629	roo	8	14230	3.5	0.0	1.8	2.9	14253	chr2R	18358376	intergenic	not near genes	chr2R	18365502	intergenic	not near genes	chr2R	18372629	intergenic	not near genes	chr2R_8_18365001	chr2R_18365001	RAL-374
734	chr2R	18575812	18575830	chr2R	18581988	18582036	3S18	7	6191	0.0	5.0	2.5	2.0	6224	chr2R	18575812	intron	GEFmeso -	chr2R	18578924	intron	GEFmeso -	chr2R	18582036	intron	GEFmeso -	chr2R_7_18575001	chr2R_18575001	RAL-374
735	chr2R	18590850	18590880	chr2R	18600019	18600048	roo	4	9170	3.0	1.5	2.2	1.2	9198	chr2R	18590850	intron	GEFmeso -	chr2R	18595449	intron	GEFmeso -	chr2R	18600048	intron	GEFmeso -	chr2R_4_18595001	chr2R_18595001	RAL-374
757	chr2R	19715838	19715851	chr2R	19723327	19723337	blood	4	7488	8.0	2.0	5.0	0.7	7499	chr2R	19715838	intergenic	not near genes	chr2R	19719588	intergenic	not near genes	chr2R	19723337	intergenic	not near genes	chr2R_4_19715001	chr2R_19715001	RAL-374
759	chr2R	19776576	19776630	chr2R	19779918	19779961	jockey	12	3340	4.0	2.0	3.0	3.0	3385	chr2R	19776576	intergenic	not near genes	chr2R	19778268	intergenic	not near genes	chr2R	19779961	intergenic	not near genes	chr2R_12_19775001	chr2R_19775001	RAL-374
760	chr2R	19914832	19914876	chr2R	19922264	19922304	mdg1	10	7432	6.0	2.0	4.0	2.0	7472	chr2R	19914832	intergenic	not near genes	chr2R	19918568	intergenic	not near genes	chr2R	19922304	intergenic	not near genes	chr2R_10_19915001	chr2R_19915001	RAL-374
761	chr2R	19957434	19957459	chr2R	19962634	19962679	copia	6	5204	4.0	1.5	2.8	1.6	5245	chr2R	19957434	intergenic	CG44623 +	chr2R	19960056	intergenic	not near genes	chr2R	19962679	intergenic	not near genes	chr2R_6_19960001	chr2R_19960001	RAL-374
775	chr2R	20739432	20739477	chr2R	20744220	20744254	F-element	12	4785	0.5	6.0	3.2	2.9	4822	chr2R	20739432	intron	dpr +	chr2R	20741843	intron	dpr +	chr2R	20744254	intron	dpr +	chr2R_12_20740001	chr2R_20740001	RAL-374
776	chr2R	20783294	20783332	chr2R	20788086	20788124	F-element	6	4792	2.0	3.0	2.5	1.7	4830	chr2R	20783294	intergenic	not near genes	chr2R	20785709	intergenic	not near genes	chr2R	20788124	intergenic	CG43666 -	chr2R_6_20785001	chr2R_20785001	RAL-374
789	chr2R	21753062	21753112	chr2R	21753567	21753617	roo	23	504	2.5	4.5	3.5	5.1	555	chr2R	21753062	intergenic	not near genes	chr2R	21753340	intergenic	not near genes	chr2R	21753617	intergenic	not near genes	chr2R_23_21750001	chr2R_21750001	RAL-374
790	chr2R	21809506	21809542	chr2R	21817766	21817802	roo	12	8259	1.0	2.0	1.5	4.8	8296	chr2R	21809506	intergenic	not near genes	chr2R	21813654	intergenic	not near genes	chr2R	21817802	intergenic	not near genes	chr2R_12_21810001	chr2R_21810001	RAL-374
806	chr2R	22349679	22349710	chr2R	22351483	22351514	jockey	5	1801	4.5	4.0	4.2	1.0	1835	chr2R	22349679	intron	Liprin-gamma -	chr2R	22350596	intron	Liprin-gamma -	chr2R	22351514	intron	Liprin-gamma -	chr2R_5_22350001	chr2R_22350001	RAL-374
810	chr2R	22525748	22525772	chr2R	22529302	22529347	jockey	4	3564	1.5	1.5	1.5	1.6	3599	chr2R	22525748	intron	px -	chr2R	22527548	intron	px -	chr2R	22529347	intron	px -	chr2R_4_22525001	chr2R_22525001	RAL-374
832	chr2R	23914294	23914332	chr2R	23921933	23921976	412	6	7638	3.0	2.5	2.8	1.6	7682	chr2R	23914294	exon	kcc +	chr2R	23918135	intron	kcc +	chr2R	23921976	exon	kcc +	chr2R_6_23915001	chr2R_23915001	RAL-374
837	chr2R	24147054	24147093	chr2R	24154651	24154684	412	7	7588	3.0	6.5	4.8	1.2	7630	chr2R	24147054	intron	Dat +	chr2R	24150869	intron	Dat +	chr2R	24154684	intron	Dat +	chr2R_7_24150001	chr2R_24150001	RAL-374
838	chr2R	24177215	24177261	chr2R	24184720	24184765	412	9	7504	4.0	5.0	4.5	1.6	7550	chr2R	24177215	3` UTR	Nop60B +	chr2R	24180990	intron	Nop60B +	chr2R	24184765	3` UTR	Nop60B +	chr2R_9_24180001	chr2R_24180001	RAL-374
840	chr2R	24353423	24353444	chr2R	24361804	24361804	roo	6	8378	3.0	7.5	5.2	1.0	8381	chr2R	24353423	intron,intron	bs +,CR44811 -	chr2R	24357614	intron,intron	bs +,CR44811 -	chr2R	24361804	intron,intron	bs +,CR44811 -	chr2R_6_24355001	chr2R_24355001	RAL-374
847	chr2R	24647573	24647611	chr2R	24655150	24655184	412	8	7572	3.5	2.0	2.8	2.1	7611	chr2R	24647573	intergenic	not near genes	chr2R	24651378	intergenic	not near genes	chr2R	24655184	intergenic	not near genes	chr2R_8_24650001	chr2R_24650001	RAL-374
849	chr2R	24763597	24763638	chr2R	24765593	24765629	G2	6	1990	2.5	3.0	2.8	1.6	2032	chr2R	24763597	exon	CG3894 +	chr2R	24764613	intron	CG3894 +	chr2R	24765629	exon	CG3894 +	chr2R_6_24760001	chr2R_24760001	RAL-374
856	chr2R	25141632	25141657	chr2R	25159342	25159367	roo	6	17708	3.5	2.5	3.0	1.5	17735	chr2R	25141632	intergenic	not near genes	chr2R	25150500	intergenic	not near genes	chr2R	25159367	intergenic	not near genes	chr2R_6_25150001	chr2R_25150001	RAL-374
860	chr3L	110199	110238	chr3L	119386	119422	roo	10	9185	2.0	0.5	1.2	4.5	9223	chr3L	110199	intergenic	not near genes	chr3L	114810	intergenic	not near genes	chr3L	119422	intergenic	not near genes	chr3L_10_110001	chr3L_110001	RAL-374
865	chr3L	402690	402716	chr3L	409743	409789	297	9	7064	2.5	4.5	3.5	2.0	7099	chr3L	402690	intergenic	not near genes	chr3L	406240	intergenic	not near genes	chr3L	409789	intergenic	not near genes	chr3L_9_405001	chr3L_405001	RAL-374
876	chr3L	925156	925210	chr3L	932602	932656	mdg1	9	7446	1.5	1.5	1.5	3.6	7500	chr3L	925156	intron	Glut1 +	chr3L	928906	intron	Glut1 +	chr3L	932656	intron	Glut1 +	chr3L_9_925001	chr3L_925001	RAL-374
880	chr3L	1047361	1047385	chr3L	1055168	1055191	412	5	7810	1.0	2.0	1.5	2.0	7830	chr3L	1047361	intron	bab1 -	chr3L	1051276	intron	bab1 -	chr3L	1055191	intron	bab1 -	chr3L_5_1050001	chr3L_1050001	RAL-374
883	chr3L	1154124	1154163	chr3L	1163294	1163332	roo	9	9169	1.5	3.0	2.2	2.8	9208	chr3L	1154124	intron	bab2 -	chr3L	1158728	intron	bab2 -	chr3L	1163332	intron	bab2 -	chr3L_9_1155001	chr3L_1155001	RAL-374
895	chr3L	1506004	1506022	chr3L	1513608	1513638	17.6	6	7610	4.0	4.5	4.2	1.2	7634	chr3L	1506004	intron,intron	Psa +,cue -	chr3L	1509821	intron,intron	Psa +,cue -	chr3L	1513638	intron,intron	Psa +,cue -	chr3L_6_1505001	chr3L_1505001	RAL-374
899	chr3L	1740853	1740871	chr3L	1741103	1741133	pogo	9	261	4.0	6.5	5.2	1.5	280	chr3L	1740853	intron	Gk +	chr3L	1740993	intron	Gk +	chr3L	1741133	intron	Gk +	chr3L_9_1740001	chr3L_1740001	RAL-374
910	chr3L	2447488	2447518	chr3L	2456664	2456694	roo	6	9176	6.5	1.0	3.8	1.2	9206	chr3L	2447488	intron	CG45186 +	chr3L	2452091	intron	CG45186 +	chr3L	2456694	intron	CG45186 +	chr3L_6_2450001	chr3L_2450001	RAL-374
920	chr3L	2927820	2927852	chr3L	2936117	2936149	Tirant	4	8297	5.5	1.0	3.2	1.0	8329	chr3L	2927820	intron	Shab +	chr3L	2931984	intron	Shab +	chr3L	2936149	intron	Shab +	chr3L_4_2930001	chr3L_2930001	RAL-374
923	chr3L	3281458	3281466	chr3L	3281933	3281958	Doc	6	493	1.5	4.0	2.8	1.6	500	chr3L	3281458	intron	CG12017 +	chr3L	3281708	intron	CG12017 +	chr3L	3281958	intron	CG12017 +	chr3L_6_3280001	chr3L_3280001	RAL-374
929	chr3L	3475058	3475106	chr3L	3475521	3475557	jockey	4	460	3.0	1.5	2.2	1.2	499	chr3L	3475058	intron	CG42324 +	chr3L	3475308	intron	CG42324 +	chr3L	3475557	intron	CG42324 +	chr3L_4_3475001	chr3L_3475001	RAL-374
932	chr3L	3601281	3601290	chr3L	3606612	3606621	copia	4	5330	6.5	2.0	4.2	0.8	5340	chr3L	3601281	intron	Eip63E +	chr3L	3603951	intron	Eip63E +	chr3L	3606621	intron	Eip63E +	chr3L_4_3600001	chr3L_3600001	RAL-374
933	chr3L	3601292	3601314	chr3L	3606608	3606645	copia	11	5324	5.5	1.5	3.5	2.4	5353	chr3L	3601292	intron	Eip63E +	chr3L	3603968	intron	Eip63E +	chr3L	3606645	intron	Eip63E +	chr3L_11_3600001	chr3L_3600001	RAL-374
938	chr3L	3833723	3833751	chr3L	3833984	3834012	pogo	5	260	1.5	1.5	1.5	2.0	289	chr3L	3833723	intron	enc +	chr3L	3833868	intron	enc +	chr3L	3834012	intron	enc +	chr3L_5_3830001	chr3L_3830001	RAL-374
952	chr3L	4901109	4901158	chr3L	4907319	4907368	diver	10	6209	2.0	5.0	3.5	2.2	6259	chr3L	4901109	intergenic	CG13704 +	chr3L	4904238	intergenic	not near genes	chr3L	4907368	intergenic	not near genes	chr3L_10_4900001	chr3L_4900001	RAL-374
954	chr3L	5034149	5034189	chr3L	5043321	5043345	roo	7	9170	0.5	2.0	1.2	3.2	9196	chr3L	5034149	intron	Con -	chr3L	5038747	intron	Con -	chr3L	5043345	intron	Con -	chr3L_7_5035001	chr3L_5035001	RAL-374
955	chr3L	5045436	5045480	chr3L	5050237	5050281	Doc	13	4801	1.5	1.5	1.5	5.2	4845	chr3L	5045436	intron	Con -	chr3L	5047858	intron	Con -	chr3L	5050281	intron	Con -	chr3L_13_5045001	chr3L_5045001	RAL-374
961	chr3L	5299154	5299167	chr3L	5306600	5306613	Quasimodo	4	7446	0.5	0.0	0.2	3.3	7459	chr3L	5299154	intergenic	not near genes	chr3L	5302884	intergenic	not near genes	chr3L	5306613	intergenic	not near genes	chr3L_4_5300001	chr3L_5300001	RAL-374
967	chr3L	5537706	5537741	chr3L	5538061	5538103	jockey	7	361	3.5	6.0	4.8	1.2	397	chr3L	5537706	intergenic	not near genes	chr3L	5537904	intergenic	not near genes	chr3L	5538103	intergenic	CG10625 -	chr3L_7_5535001	chr3L_5535001	RAL-374
971	chr3L	5910020	5910057	chr3L	5910280	5910318	pogo	9	260	3.0	2.5	2.8	2.4	298	chr3L	5910020	intron	CG13288 +	chr3L	5910169	intron	CG13288 +	chr3L	5910318	intron	CG13288 +	chr3L_9_5910001	chr3L_5910001	RAL-374
972	chr3L	5926333	5926343	chr3L	5926519	5926553	BS	6	201	0.5	6.0	3.2	1.4	220	chr3L	5926333	intron	Vap-33B +	chr3L	5926443	intron	Vap-33B +	chr3L	5926553	intron	Vap-33B +	chr3L_6_5925001	chr3L_5925001	RAL-374
973	chr3L	6001666	6001701	chr3L	6004386	6004421	jockey	6	2720	4.5	1.5	3.0	1.5	2755	chr3L	6001666	intron	PVRAP +	chr3L	6003044	intron	PVRAP +	chr3L	6004421	intron	PVRAP +	chr3L_6_6000001	chr3L_6000001	RAL-374
974	chr3L	6040350	6040380	chr3L	6042726	6042756	Doc	4	2376	2.5	3.5	3.0	1.0	2406	chr3L	6040350	intergenic	Jon65Aiv +	chr3L	6041553	intergenic	not near genes	chr3L	6042756	intergenic	not near genes	chr3L_4_6040001	chr3L_6040001	RAL-374
979	chr3L	6220899	6220948	chr3L	6230071	6230103	roo	13	9170	1.5	5.0	3.2	3.1	9204	chr3L	6220899	5` UTR	pncr008:3L +	chr3L	6225501	intergenic	not near genes	chr3L	6230103	intergenic	not near genes	chr3L_13_6225001	chr3L_6225001	RAL-374
984	chr3L	6334996	6335038	chr3L	6335484	6335513	297	4	486	2.5	4.0	3.2	1.0	517	chr3L	6334996	intron	CG13300 -	chr3L	6335254	intron	CG13300 -	chr3L	6335513	intron	CG13300 -	chr3L_4_6335001	chr3L_6335001	RAL-374
986	chr3L	6405660	6405679	chr3L	6432144	6432163	roo	4	26484	5.0	4.0	4.5	0.7	26503	chr3L	6405660	intron	CG42747 +	chr3L	6418912	intron	CG42747 +	chr3L	6432163	intron	CG42747 +	chr3L_4_6415001	chr3L_6415001	RAL-374
991	chr3L	6855917	6855954	chr3L	6860721	6860758	Doc	6	4804	1.0	5.0	3.0	1.5	4841	chr3L	6855917	intergenic	not near genes	chr3L	6858338	intergenic	not near genes	chr3L	6860758	intergenic	not near genes	chr3L_6_6855001	chr3L_6855001	RAL-374
993	chr3L	6887530	6887542	chr3L	6895017	6895054	roo	4	7506	2.5	0.0	1.2	1.8	7524	chr3L	6887530	intergenic	not near genes	chr3L	6891292	intergenic	not near genes	chr3L	6895054	intergenic	not near genes	chr3L_4_6890001	chr3L_6890001	RAL-374
999	chr3L	7129961	7129974	chr3L	7130172	7130186	BS	5	211	1.0	4.0	2.5	1.4	225	chr3L	7129961	intergenic	CG15829 +	chr3L	7130074	intergenic	CG15829 +	chr3L	7130186	intergenic	not near genes	chr3L_5_7130001	chr3L_7130001	RAL-374
1002	chr3L	7377298	7377346	chr3L	7380423	7380471	297	6	3125	1.0	1.0	1.0	3.0	3173	chr3L	7377298	intron	SMSr -	chr3L	7378884	intron	SMSr -	chr3L	7380471	intron	SMSr -	chr3L_6_7375001	chr3L_7375001	RAL-374
1007	chr3L	7793700	7793742	chr3L	7800772	7800814	297	9	7071	3.0	3.5	3.2	2.1	7114	chr3L	7793700	intron	CG32369 -	chr3L	7797257	intron	CG32369 -	chr3L	7800814	intron	CG32369 -	chr3L_9_7795001	chr3L_7795001	RAL-374
1008	chr3L	7886496	7886534	chr3L	7889040	7889064	Stalker4	5	2538	0.5	2.0	1.2	2.3	2568	chr3L	7886496	intron	CG32365 +	chr3L	7887780	intron	CG32365 +	chr3L	7889064	intron	CG32365 +	chr3L_5_7885001	chr3L_7885001	RAL-374
1009	chr3L	7916815	7916850	chr3L	7926006	7926041	roo	5	9191	1.5	1.0	1.2	2.3	9226	chr3L	7916815	3` UTR	syd -	chr3L	7921428	intron	syd -	chr3L	7926041	3` UTR	syd -	chr3L_5_7920001	chr3L_7920001	RAL-374
1010	chr3L	7985362	7985385	chr3L	7987702	7987734	NOF	11	2347	1.5	4.5	3.0	2.8	2372	chr3L	7985362	intron	nmo +	chr3L	7986548	intron	nmo +	chr3L	7987734	intron	nmo +	chr3L_11_7985001	chr3L_7985001	RAL-374
1020	chr3L	8791257	8791299	chr3L	8796697	8796739	I-element	11	5437	5.5	3.5	4.5	2.0	5482	chr3L	8791257	exon	Fhos +	chr3L	8793998	intron	Fhos +	chr3L	8796739	intron	Fhos +	chr3L_11_8790001	chr3L_8790001	RAL-374
1027	chr3L	9076912	9076956	chr3L	9084492	9084536	412	9	7580	3.5	3.5	3.5	2.0	7624	chr3L	9076912	exon	Tequila +	chr3L	9080724	intron	Tequila +	chr3L	9084536	exon	Tequila +	chr3L_9_9080001	chr3L_9080001	RAL-374
1029	chr3L	9130537	9130575	chr3L	9134318	9134356	412	6	3780	8.0	2.0	5.0	1.0	3819	chr3L	9130537	intergenic	bol -	chr3L	9132446	intergenic	not near genes	chr3L	9134356	intergenic	Dhpr +	chr3L_6_9130001	chr3L_9130001	RAL-374
1030	chr3L	9164685	9164714	chr3L	9166172	9166201	hobo	6	1487	3.0	0.0	1.5	2.4	1516	chr3L	9164685	intron	Rdl -	chr3L	9165443	intron	Rdl -	chr3L	9166201	intron	Rdl -	chr3L_6_9165001	chr3L_9165001	RAL-374
1031	chr3L	9219229	9219269	chr3L	9219921	9219937	jockey	7	688	2.0	4.0	3.0	1.8	708	chr3L	9219229	intergenic	not near genes	chr3L	9219583	intergenic	not near genes	chr3L	9219937	intergenic	not near genes	chr3L_7_9215001	chr3L_9215001	RAL-374
1033	chr3L	9443494	9443539	chr3L	9445299	9445350	S-element	11	1809	1.5	3.5	2.5	3.1	1856	chr3L	9443494	intron	CG33926 +	chr3L	9444422	intron	CG33926 +	chr3L	9445350	intron	CG33926 +	chr3L_11_9440001	chr3L_9440001	RAL-374
1037	chr3L	9571882	9571929	chr3L	9572250	9572297	jockey	5	368	1.5	3.0	2.2	1.6	415	chr3L	9571882	intron	CG42673 +	chr3L	9572090	intron	CG42673 +	chr3L	9572297	intron	CG42673 +	chr3L_5_9570001	chr3L_9570001	RAL-374
1038	chr3L	9575905	9575940	chr3L	9580995	9581038	jockey	5	5095	3.0	3.0	3.0	1.2	5133	chr3L	9575905	intron	CG42673 +	chr3L	9578472	intron	CG42673 +	chr3L	9581038	intron	CG42673 +	chr3L_5_9575001	chr3L_9575001	RAL-374
1043	chr3L	9929653	9929695	chr3L	9938453	9938495	roo	13	8798	2.0	4.0	3.0	3.2	8842	chr3L	9929653	intron	CG34356 +	chr3L	9934074	intron	CG34356 +	chr3L	9938495	intron	CG34356 +	chr3L_13_9930001	chr3L_9930001	RAL-374
1049	chr3L	10060103	10060116	chr3L	10067696	10067715	17.6	4	7597	5.5	0.5	3.0	1.0	7612	chr3L	10060103	intron	dpr6 +	chr3L	10063909	intron	dpr6 +	chr3L	10067715	intron	dpr6 +	chr3L_4_10060001	chr3L_10060001	RAL-374
1057	chr3L	10414932	10414972	chr3L	10417323	10417364	Doc	11	2389	2.5	4.5	3.5	2.4	2432	chr3L	10414932	intergenic	CG12362 +	chr3L	10416148	intergenic	not near genes	chr3L	10417364	intergenic	not near genes	chr3L_11_10415001	chr3L_10415001	RAL-374
1069	chr3L	11087043	11087088	chr3L	11088851	11088897	S-element	7	1809	0.5	2.0	1.2	3.2	1854	chr3L	11087043	intron	JIL-1 -	chr3L	11087970	intron	JIL-1 -	chr3L	11088897	intron	JIL-1 -	chr3L_7_11085001	chr3L_11085001	RAL-374
1071	chr3L	11264454	11264493	chr3L	11271426	11271464	17.6	5	6972	3.0	4.5	3.8	1.0	7010	chr3L	11264454	intergenic	not near genes	chr3L	11267959	intergenic	not near genes	chr3L	11271464	intergenic	not near genes	chr3L_5_11265001	chr3L_11265001	RAL-374
1078	chr3L	11564795	11564811	chr3L	11572407	11572413	412	5	7617	1.5	4.0	2.8	1.3	7618	chr3L	11564795	exon	CG33267 +	chr3L	11568604	intron	CG33267 +	chr3L	11572413	exon	CG33267 +	chr3L_5_11565001	chr3L_11565001	RAL-374
1082	chr3L	11723067	11723114	chr3L	11727882	11727929	Doc	6	4815	0.5	2.5	1.5	2.4	4862	chr3L	11723067	3` UTR	Bmcp +	chr3L	11725498	intron	Bmcp +	chr3L	11727929	3` UTR	Bmcp +	chr3L_6_11725001	chr3L_11725001	RAL-374
1112	chr3L	12874922	12874932	chr3L	12877234	12877244	jockey	5	2312	4.0	2.0	3.0	1.2	2322	chr3L	12874922	intergenic	not near genes	chr3L	12876083	intergenic	not near genes	chr3L	12877244	intergenic	not near genes	chr3L_5_12875001	chr3L_12875001	RAL-374
1113	chr3L	12874935	12874962	chr3L	12877229	12877274	jockey	10	2308	1.5	1.5	1.5	4.0	2339	chr3L	12874935	intergenic	not near genes	chr3L	12876104	intergenic	not near genes	chr3L	12877274	intergenic	not near genes	chr3L_10_12875001	chr3L_12875001	RAL-374
1118	chr3L	12957790	12957811	chr3L	12962292	12962313	copia	6	4500	5.0	10.0	7.5	0.7	4523	chr3L	12957790	intergenic	not near genes	chr3L	12960052	intergenic	not near genes	chr3L	12962313	intergenic	not near genes	chr3L_6_12960001	chr3L_12960001	RAL-374
1128	chr3L	13525136	13525186	chr3L	13532952	13532992	roo	9	7815	3.5	4.0	3.8	1.9	7856	chr3L	13525136	intergenic	not near genes	chr3L	13529064	intergenic	not near genes	chr3L	13532992	intergenic	not near genes	chr3L_9_13525001	chr3L_13525001	RAL-374
1133	chr3L	13804534	13804572	chr3L	13822840	13822868	roo	7	18304	1.5	4.5	3.0	1.8	18334	chr3L	13804534	intergenic	not near genes	chr3L	13813701	intergenic	not near genes	chr3L	13822868	intergenic	not near genes	chr3L_7_13810001	chr3L_13810001	RAL-374
1142	chr3L	14245574	14245587	chr3L	14245664	14245701	1360	6	108	4.0	1.5	2.8	1.6	127	chr3L	14245574	3` UTR	CR44561 -	chr3L	14245638	3` UTR	CR44561 -	chr3L	14245701	intergenic	CR44561 -,CR44560 +	chr3L_6_14245001	chr3L_14245001	RAL-374
1143	chr3L	14267354	14267371	chr3L	14271814	14271831	F-element	5	4458	2.5	3.5	3.0	1.2	4477	chr3L	14267354	intergenic	not near genes	chr3L	14269592	intergenic	not near genes	chr3L	14271831	intergenic	not near genes	chr3L_5_14265001	chr3L_14265001	RAL-374
1144	chr3L	14267375	14267398	chr3L	14271808	14271815	F-element	5	4428	1.5	3.5	2.5	1.4	4440	chr3L	14267375	intergenic	not near genes	chr3L	14269595	intergenic	not near genes	chr3L	14271815	intergenic	not near genes	chr3L_5_14265001	chr3L_14265001	RAL-374
1145	chr3L	14295966	14296005	chr3L	14296472	14296509	roo	6	506	1.0	2.5	1.8	2.1	543	chr3L	14295966	intron	fz +	chr3L	14296238	intron	fz +	chr3L	14296509	intron	fz +	chr3L_6_14295001	chr3L_14295001	RAL-374
1148	chr3L	14312026	14312046	chr3L	14316843	14316853	X-element	7	4827	1.0	4.0	2.5	2.0	4827	chr3L	14312026	exon	fz +	chr3L	14314440	intron	fz +	chr3L	14316853	intron	fz +	chr3L_7_14310001	chr3L_14310001	RAL-374
1154	chr3L	14468433	14468474	chr3L	14473659	14473699	copia	4	5224	1.0	1.5	1.2	1.8	5266	chr3L	14468433	intron	bbg -	chr3L	14471066	intron	bbg -	chr3L	14473699	intron	bbg -	chr3L_4_14470001	chr3L_14470001	RAL-374
1158	chr3L	14721179	14721206	chr3L	14723032	14723067	Rt1c	4	1858	0.5	1.0	0.8	2.2	1888	chr3L	14721179	intron	ome +	chr3L	14722123	intron	ome +	chr3L	14723067	intron	ome +	chr3L_4_14720001	chr3L_14720001	RAL-374
1166	chr3L	15085027	15085071	chr3L	15086213	15086257	1360	5	1186	1.0	2.5	1.8	1.8	1230	chr3L	15085027	intron	cp309 -	chr3L	15085642	intron	cp309 -	chr3L	15086257	intron	cp309 -	chr3L_5_15085001	chr3L_15085001	RAL-374
1171	chr3L	15295751	15295799	chr3L	15298614	15298662	gypsy5	8	2863	2.5	1.5	2.0	2.7	2911	chr3L	15295751	intergenic	not near genes	chr3L	15297206	intergenic	not near genes	chr3L	15298662	intergenic	Best4 +	chr3L_8_15295001	chr3L_15295001	RAL-374
1172	chr3L	15423753	15423784	chr3L	15426617	15426648	opus	8	2864	2.0	2.5	2.2	2.5	2895	chr3L	15423753	intergenic	not near genes	chr3L	15425200	intergenic	not near genes	chr3L	15426648	intergenic	not near genes	chr3L_8_15425001	chr3L_15425001	RAL-374
1182	chr3L	15929182	15929220	chr3L	15938349	15938387	roo	7	9166	2.5	1.5	2.0	2.3	9205	chr3L	15929182	intron	Pka-C3 -	chr3L	15933784	intron	Pka-C3 -	chr3L	15938387	intron	Pka-C3 -	chr3L_7_15930001	chr3L_15930001	RAL-374
1187	chr3L	16184110	16184119	chr3L	16188930	16188983	X-element	4	4853	0.5	1.0	0.8	2.2	4873	chr3L	16184110	intergenic	not near genes	chr3L	16186546	intergenic	not near genes	chr3L	16188983	intergenic	not near genes	chr3L_4_16185001	chr3L_16185001	RAL-374
1192	chr3L	16443838	16443878	chr3L	16446197	16446238	Doc	12	2360	4.0	3.5	3.8	2.5	2400	chr3L	16443838	intron,intron	CG33158 +,dsx-c73A -	chr3L	16445038	intron,intron	CG33158 +,dsx-c73A -	chr3L	16446238	intron,intron	CG33158 +,dsx-c73A -	chr3L_12_16445001	chr3L_16445001	RAL-374
1195	chr3L	16493959	16494011	chr3L	16494496	16494536	jockey	18	533	1.5	5.0	3.2	4.3	577	chr3L	16493959	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494248	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L	16494536	intron,intron,intron	CG33158 +,CG42514 -,CG43373 -	chr3L_18_16490001	chr3L_16490001	RAL-374
1199	chr3L	16616491	16616541	chr3L	16621838	16621889	297	7	5347	2.5	2.5	2.5	2.0	5398	chr3L	16616491	3` UTR	Abl -	chr3L	16619190	3` UTR	Abl -	chr3L	16621889	3` UTR	Abl -	chr3L_7_16615001	chr3L_16615001	RAL-374
1201	chr3L	16684013	16684039	chr3L	16689254	16689280	copia	4	5241	3.5	1.5	2.5	1.1	5267	chr3L	16684013	intron,intron	Lasp -,CG43954 -	chr3L	16686646	intron,intron	Lasp -,CG43954 -	chr3L	16689280	intron,intron,5` UTR	Lasp -,CG43954 -,CR45179 +	chr3L_4_16685001	chr3L_16685001	RAL-374
1214	chr3L	17034916	17034965	chr3L	17035124	17035173	G2	8	208	0.5	3.0	1.8	2.9	257	chr3L	17034916	intergenic	not near genes	chr3L	17035044	intergenic	not near genes	chr3L	17035173	intergenic	beg +	chr3L_8_17035001	chr3L_17035001	RAL-374
1215	chr3L	17084985	17085036	chr3L	17094154	17094205	roo	9	9169	3.0	5.5	4.2	1.7	9220	chr3L	17084985	intron	Rbp6 -	chr3L	17089595	intron	Rbp6 -	chr3L	17094205	intron	Rbp6 -	chr3L_9_17085001	chr3L_17085001	RAL-374
1225	chr3L	17516977	17517008	chr3L	17524541	17524575	412	7	7574	2.5	5.0	3.8	1.5	7598	chr3L	17516977	intron	CG7564 +	chr3L	17520776	intron	CG7564 +	chr3L	17524575	3` UTR	CG7564 +	chr3L_7_17520001	chr3L_17520001	RAL-374
1226	chr3L	17730830	17730875	chr3L	17738180	17738225	mdg1	7	7350	1.5	2.5	2.0	2.3	7395	chr3L	17730830	intron	Ccn +	chr3L	17734528	intron	Ccn +	chr3L	17738225	intron	Ccn +	chr3L_7_17730001	chr3L_17730001	RAL-374
1230	chr3L	17918351	17918396	chr3L	17921174	17921215	opus	6	2820	3.0	0.5	1.8	2.1	2864	chr3L	17918351	intergenic	not near genes	chr3L	17919783	intergenic	not near genes	chr3L	17921215	intergenic	not near genes	chr3L_6_17915001	chr3L_17915001	RAL-374
1231	chr3L	18047696	18047738	chr3L	18056772	18056815	roo	9	9076	1.5	1.0	1.2	4.1	9119	chr3L	18047696	intron	Eip75B -	chr3L	18052256	intron	Eip75B -	chr3L	18056815	intron	Eip75B -	chr3L_9_18050001	chr3L_18050001	RAL-374
1249	chr3L	18506120	18506148	chr3L	18509603	18509631	F-element	6	3482	2.0	2.0	2.0	2.0	3511	chr3L	18506120	intergenic	not near genes	chr3L	18507876	intergenic	not near genes	chr3L	18509631	intergenic	not near genes	chr3L_6_18505001	chr3L_18505001	RAL-374
1253	chr3L	18593929	18593949	chr3L	18595929	18595949	Doc	5	2000	3.5	0.5	2.0	1.7	2020	chr3L	18593929	intergenic	term -	chr3L	18594939	intergenic	not near genes	chr3L	18595949	intergenic	CR45389 +	chr3L_5_18590001	chr3L_18590001	RAL-374
1256	chr3L	18710749	18710782	chr3L	18718720	18718754	Stalker2	4	7972	1.0	3.5	2.2	1.2	8005	chr3L	18710749	intergenic	not near genes	chr3L	18714752	intergenic	not near genes	chr3L	18718754	intergenic	not near genes	chr3L_4_18710001	chr3L_18710001	RAL-374
1259	chr3L	18772394	18772438	chr3L	18781095	18781134	roo	12	8700	4.0	3.0	3.5	2.7	8740	chr3L	18772394	intron	ftz-f1 -	chr3L	18776764	intron	ftz-f1 -	chr3L	18781134	intron	ftz-f1 -	chr3L_12_18775001	chr3L_18775001	RAL-374
1261	chr3L	18833774	18833803	chr3L	18834958	18834987	1360	4	1184	4.0	3.5	3.8	0.8	1213	chr3L	18833774	intron	Indy -	chr3L	18834380	intron	Indy -	chr3L	18834987	intron	Indy -	chr3L_4_18830001	chr3L_18830001	RAL-374
1265	chr3L	19008829	19008870	chr3L	19009187	19009228	jockey	8	358	1.5	3.0	2.2	2.5	399	chr3L	19008829	intron	nkd -	chr3L	19009028	intron	nkd -	chr3L	19009228	intron	nkd -	chr3L_8_19005001	chr3L_19005001	RAL-374
1271	chr3L	19117023	19117075	chr3L	19124487	19124542	mdg1	18	7462	3.5	3.0	3.2	4.3	7519	chr3L	19117023	intron	CG14082 -	chr3L	19120782	intron	CG14082 -	chr3L	19124542	intron	CG14082 -	chr3L_18_19120001	chr3L_19120001	RAL-374
1274	chr3L	19208051	19208089	chr3L	19209434	19209483	Doc	9	1390	2.0	1.5	1.8	3.2	1432	chr3L	19208051	intron	fz2 -	chr3L	19208767	intron	fz2 -	chr3L	19209483	intron	fz2 -	chr3L_9_19205001	chr3L_19205001	RAL-374
1283	chr3L	19848487	19848532	chr3L	19857697	19857699	roo	12	9202	2.5	2.0	2.2	3.8	9212	chr3L	19848487	intron	Papss +	chr3L	19853093	intron	Papss +	chr3L	19857699	intron	Papss +	chr3L_12_19850001	chr3L_19850001	RAL-374
1284	chr3L	19861821	19861845	chr3L	19863629	19863653	S-element	8	1808	4.0	4.0	4.0	1.6	1832	chr3L	19861821	5` UTR	CR45433 +	chr3L	19862737	intergenic	not near genes	chr3L	19863653	intergenic	not near genes	chr3L_8_19860001	chr3L_19860001	RAL-374
1289	chr3L	20113642	20113685	chr3L	20122918	20122962	roo	8	9277	1.5	1.0	1.2	3.6	9320	chr3L	20113642	intergenic	not near genes	chr3L	20118302	intergenic	not near genes	chr3L	20122962	intergenic	not near genes	chr3L_8_20115001	chr3L_20115001	RAL-374
1291	chr3L	20257314	20257353	chr3L	20258454	20258493	pogo	10	1140	3.0	1.0	2.0	3.3	1179	chr3L	20257314	intron	rdgC +	chr3L	20257904	intron	rdgC +	chr3L	20258493	intron	rdgC +	chr3L_10_20255001	chr3L_20255001	RAL-374
1294	chr3L	20476735	20476763	chr3L	20484354	20484381	springer	8	7619	3.5	3.0	3.2	1.9	7646	chr3L	20476735	3` UTR	isoQC +	chr3L	20480558	intergenic	not near genes	chr3L	20484381	3` UTR	ZnT77C -	chr3L_8_20480001	chr3L_20480001	RAL-374
1295	chr3L	20487642	20487669	chr3L	20488113	20488133	INE-1	12	470	5.0	0.5	2.8	3.2	491	chr3L	20487642	intron	ZnT77C -	chr3L	20487888	intron	ZnT77C -	chr3L	20488133	exon	ZnT77C -	chr3L_12_20485001	chr3L_20485001	RAL-374
1302	chr3L	20821270	20821310	chr3L	20824901	20824920	NOF	9	3628	2.0	4.0	3.0	2.2	3650	chr3L	20821270	intron	Pka-R1 +	chr3L	20823095	intron	Pka-R1 +	chr3L	20824920	intron	Pka-R1 +	chr3L_9_20820001	chr3L_20820001	RAL-374
1318	chr3L	21151853	21151897	chr3L	21156957	21157001	flea	6	5104	3.5	3.5	3.5	1.3	5148	chr3L	21151853	intron	Ac78C -	chr3L	21154427	intron	Ac78C -	chr3L	21157001	intron	Ac78C -	chr3L_6_21150001	chr3L_21150001	RAL-374
1323	chr3L	21306134	21306179	chr3L	21315313	21315344	roo	9	9177	4.0	4.5	4.2	1.7	9210	chr3L	21306134	3` UTR	CG7632 +	chr3L	21310739	intron	Pc -	chr3L	21315344	3` UTR	Pc -	chr3L_9_21310001	chr3L_21310001	RAL-374
1324	chr3L	21361708	21361747	chr3L	21362680	21362721	G2	9	973	4.0	4.5	4.2	1.7	1013	chr3L	21361708	intergenic	CG32440 +	chr3L	21362214	intergenic	not near genes	chr3L	21362721	intergenic	not near genes	chr3L_9_21360001	chr3L_21360001	RAL-374
1337	chr3L	22099666	22099701	chr3L	22105869	22105907	3S18	9	6203	5.5	4.0	4.8	1.6	6241	chr3L	22099666	intergenic	not near genes	chr3L	22102786	intergenic	not near genes	chr3L	22105907	intergenic	not near genes	chr3L_9_22100001	chr3L_22100001	RAL-374
1343	chr3L	22555756	22555775	chr3L	22563246	22563260	blood	4	7488	2.5	2.0	2.2	1.2	7504	chr3L	22555756	intergenic	not near genes	chr3L	22559508	intergenic	not near genes	chr3L	22563260	intergenic	not near genes	chr3L_4_22555001	chr3L_22555001	RAL-374
1344	chr3L	22555782	22555801	chr3L	22563240	22563271	blood	5	7479	1.0	1.5	1.2	2.3	7489	chr3L	22555782	intergenic	not near genes	chr3L	22559526	intergenic	not near genes	chr3L	22563271	intergenic	not near genes	chr3L_5_22555001	chr3L_22555001	RAL-374
1345	chr3L	22617179	22617222	chr3L	22624646	22624694	blood	14	7466	3.0	3.0	3.0	3.5	7515	chr3L	22617179	intron	CG14459 -	chr3L	22620936	intron	CG14459 -	chr3L	22624694	intron	CG14459 -	chr3L_14_22620001	chr3L_22620001	RAL-374
1346	chr3L	22761383	22761415	chr3L	22766816	22766869	Ivk	14	5452	2.5	4.5	3.5	3.1	5486	chr3L	22761383	intron	SPoCk +	chr3L	22764126	intron	SPoCk +	chr3L	22766869	intron	SPoCk +	chr3L_14_22760001	chr3L_22760001	RAL-374
1349	chr3L	22865969	22866006	chr3L	22867122	22867159	Doc	6	1152	6.5	2.0	4.2	1.2	1190	chr3L	22865969	intron	CG33170 +	chr3L	22866564	intron	CG33170 +	chr3L	22867159	intron	CG33170 +	chr3L_6_22865001	chr3L_22865001	RAL-374
1352	chr3L	22989850	22989869	chr3L	22996844	22996862	297	6	6992	5.5	2.5	4.0	1.2	7012	chr3L	22989850	intergenic	not near genes	chr3L	22993356	intergenic	not near genes	chr3L	22996862	intergenic	not near genes	chr3L_6_22990001	chr3L_22990001	RAL-374
1355	chr3L	24012414	24012433	chr3L	24020775	24020793	roo	5	8360	2.5	1.5	2.0	1.7	8379	chr3L	24012414	intergenic	not near genes	chr3L	24016604	intergenic	not near genes	chr3L	24020793	intergenic	not near genes	chr3L_5_24015001	chr3L_24015001	RAL-374
1364	chr3R	2446795	2446835	chr3R	2449024	2449065	1360	6	2230	30.0	34.5	32.2	0.2	2270	chr3R	2446795	intergenic	not near genes	chr3R	2447930	intergenic	not near genes	chr3R	2449065	intergenic	not near genes	chr3R_6_2445001	chr3R_2445001	RAL-374
1368	chr3R	4105031	4105065	chr3R	4110255	4110288	copia	4	5223	2.0	2.5	2.2	1.2	5257	chr3R	4105031	intergenic	not near genes	chr3R	4107660	intergenic	not near genes	chr3R	4110288	intergenic	not near genes	chr3R_4_4105001	chr3R_4105001	RAL-374
1370	chr3R	4408413	4408438	chr3R	4412718	4412761	Juan	4	4319	3.5	2.5	3.0	1.0	4348	chr3R	4408413	intron	CG32944 -	chr3R	4410587	intron	CG32944 -	chr3R	4412761	intron	CG32944 -	chr3R_4_4410001	chr3R_4410001	RAL-374
1371	chr3R	4538731	4538755	chr3R	4540138	4540162	1360	7	1407	1.0	2.5	1.8	2.5	1431	chr3R	4538731	intron	CG34357 -	chr3R	4539446	intron	CG34357 -	chr3R	4540162	intron	CG34357 -	chr3R_7_4535001	chr3R_4535001	RAL-374
1372	chr3R	4609529	4609579	chr3R	4610713	4610763	1360	17	1183	5.5	2.0	3.8	3.5	1234	chr3R	4609529	intergenic	not near genes	chr3R	4610146	intergenic	not near genes	chr3R	4610763	intergenic	not near genes	chr3R_17_4610001	chr3R_4610001	RAL-374
1374	chr3R	4753251	4753270	chr3R	4757546	4757571	F-element	10	4315	3.5	4.0	3.8	2.1	4320	chr3R	4753251	intron,intron	atms +,CG44098 -	chr3R	4755411	intron,intron	atms +,CG44098 -	chr3R	4757571	intron,exon	atms +,CG44098 -	chr3R_10_4755001	chr3R_4755001	RAL-374
1379	chr3R	5067968	5068013	chr3R	5073505	5073550	mdg3	13	5535	2.5	2.5	2.5	3.7	5582	chr3R	5067968	intergenic	not near genes	chr3R	5070759	intergenic	not near genes	chr3R	5073550	intergenic	not near genes	chr3R_13_5070001	chr3R_5070001	RAL-374
1382	chr3R	5338390	5338427	chr3R	5343587	5343618	Rt1c	6	5196	2.0	7.0	4.5	1.1	5228	chr3R	5338390	intron	mtd -	chr3R	5341004	intron	mtd -	chr3R	5343618	intron	mtd -	chr3R_6_5340001	chr3R_5340001	RAL-374
1383	chr3R	5365325	5365346	chr3R	5367013	5367032	NOF	9	1687	5.5	9.0	7.2	1.1	1707	chr3R	5365325	intron	Cerk -	chr3R	5366178	intron	Cerk -	chr3R	5367032	intron	Cerk -	chr3R_9_5365001	chr3R_5365001	RAL-374
1386	chr3R	5445942	5445994	chr3R	5452422	5452473	Burdock	10	6479	1.5	2.0	1.8	3.6	6531	chr3R	5445942	intron	CG14669 +	chr3R	5449208	intron	CG14669 +	chr3R	5452473	intron	CG14669 +	chr3R_10_5445001	chr3R_5445001	RAL-374
1391	chr3R	5746014	5746041	chr3R	5746275	5746297	pogo	9	260	2.5	5.5	4.0	1.8	283	chr3R	5746014	3` UTR	Madm +	chr3R	5746156	3` UTR	Madm +	chr3R	5746297	3` UTR	Madm +	chr3R_9_5745001	chr3R_5745001	RAL-374
1392	chr3R	5747002	5747035	chr3R	5753212	5753246	diver	4	6210	1.0	1.5	1.2	1.8	6244	chr3R	5747002	intergenic	Madm +	chr3R	5750124	intergenic	not near genes	chr3R	5753246	intergenic	CG2091 -	chr3R_4_5750001	chr3R_5750001	RAL-374
1394	chr3R	5809100	5809144	chr3R	5809361	5809402	pogo	6	260	2.5	3.5	3.0	1.5	302	chr3R	5809100	3` UTR	CG11000 +	chr3R	5809251	3` UTR	CG11000 +	chr3R	5809402	3` UTR	CG11000 +	chr3R_6_5805001	chr3R_5805001	RAL-374
1395	chr3R	5822366	5822407	chr3R	5823549	5823594	1360	7	1186	4.0	3.0	3.5	1.6	1228	chr3R	5822366	3` UTR	CG2023 -	chr3R	5822980	3` UTR	CG2023 -	chr3R	5823594	3` UTR	CG2023 -	chr3R_7_5820001	chr3R_5820001	RAL-374
1397	chr3R	5927547	5927574	chr3R	5927807	5927832	pogo	5	260	3.0	4.0	3.5	1.1	285	chr3R	5927547	intron	CG34113 -	chr3R	5927690	intron	CG34113 -	chr3R	5927832	intron	CG34113 -	chr3R_5_5925001	chr3R_5925001	RAL-374
1400	chr3R	6158490	6158540	chr3R	6167093	6167140	Tirant	6	8593	2.5	2.0	2.2	1.9	8650	chr3R	6158490	intergenic	not near genes	chr3R	6162815	intergenic	not near genes	chr3R	6167140	intergenic	CG1077 +	chr3R_6_6160001	chr3R_6160001	RAL-374
1401	chr3R	6206273	6206313	chr3R	6206510	6206550	BS	7	231	2.5	4.0	3.2	1.7	277	chr3R	6206273	exon	Osi24 +	chr3R	6206412	intron	Osi24 +	chr3R	6206550	intron	Osi24 +	chr3R_7_6205001	chr3R_6205001	RAL-374
1407	chr3R	6737487	6737519	chr3R	6739294	6739326	Doc	4	1807	2.5	5.0	3.8	0.8	1839	chr3R	6737487	intron	pb -	chr3R	6738406	intron	pb -	chr3R	6739326	intron	pb -	chr3R_4_6735001	chr3R_6735001	RAL-374
1424	chr3R	7729454	7729487	chr3R	7737412	7737421	Stalker2	11	7953	2.5	3.5	3.0	2.8	7967	chr3R	7729454	intergenic	not near genes	chr3R	7733438	intergenic	not near genes	chr3R	7737421	intergenic	not near genes	chr3R_11_7730001	chr3R_7730001	RAL-374
1425	chr3R	7849663	7849671	chr3R	7850848	7850857	1360	4	1186	1.0	8.0	4.5	0.7	1194	chr3R	7849663	intron	CG34384 +	chr3R	7850260	intron	CG34384 +	chr3R	7850857	intron	CG34384 +	chr3R_4_7850001	chr3R_7850001	RAL-374
1428	chr3R	7973300	7973333	chr3R	7974381	7974415	1360	5	1082	4.0	1.0	2.5	1.4	1115	chr3R	7973300	intergenic	not near genes	chr3R	7973858	intergenic	not near genes	chr3R	7974415	3` UTR	CD98hc -	chr3R_5_7970001	chr3R_7970001	RAL-374
1430	chr3R	8090551	8090567	chr3R	8094046	8094064	297	7	3496	2.0	7.5	4.8	1.2	3513	chr3R	8090551	intergenic	CR44330 +	chr3R	8092308	intergenic	not near genes	chr3R	8094064	intergenic	CG7900 +	chr3R_7_8090001	chr3R_8090001	RAL-374
1431	chr3R	8094392	8094418	chr3R	8099717	8099743	Transpac	4	5325	4.5	2.0	3.2	1.0	5351	chr3R	8094392	intron	CG7900 +	chr3R	8097068	intron	CG7900 +	chr3R	8099743	intron	CG7900 +	chr3R_4_8095001	chr3R_8095001	RAL-374
1432	chr3R	8101750	8101782	chr3R	8104854	8104878	G2	6	3098	1.0	0.5	0.8	3.3	3128	chr3R	8101750	exon	CG7900 +	chr3R	8103314	intron	CG7900 +	chr3R	8104878	3` UTR	CG7900 +	chr3R_6_8100001	chr3R_8100001	RAL-374
1434	chr3R	8402995	8403041	chr3R	8412176	8412205	roo	13	9174	1.5	3.5	2.5	3.7	9210	chr3R	8402995	intron	CG45263 -	chr3R	8407600	intron	CG45263 -	chr3R	8412205	intron	CG45263 -	chr3R_13_8405001	chr3R_8405001	RAL-374
1436	chr3R	8570466	8570509	chr3R	8575122	8575161	HMS-Beagle	8	4655	4.0	3.0	3.5	1.8	4695	chr3R	8570466	intergenic	not near genes	chr3R	8572814	intergenic	not near genes	chr3R	8575161	intergenic	not near genes	chr3R_8_8570001	chr3R_8570001	RAL-374
1437	chr3R	8601756	8601797	chr3R	8610927	8610970	roo	5	9172	2.5	3.0	2.8	1.3	9214	chr3R	8601756	intron	5-HT2B +	chr3R	8606363	intron	5-HT2B +	chr3R	8610970	intron	5-HT2B +	chr3R_5_8605001	chr3R_8605001	RAL-374
1443	chr3R	8898205	8898212	chr3R	8913804	8913811	297	4	15600	3.5	1.5	2.5	1.1	15606	chr3R	8898205	intron	pyd -	chr3R	8906008	intron	pyd -	chr3R	8913811	intron	pyd -	chr3R_4_8905001	chr3R_8905001	RAL-374
1450	chr3R	9278782	9278804	chr3R	9284062	9284083	Rt1a	6	5279	5.0	3.0	4.0	1.2	5301	chr3R	9278782	intergenic	not near genes	chr3R	9281432	intergenic	not near genes	chr3R	9284083	intergenic	not near genes	chr3R_6_9280001	chr3R_9280001	RAL-374
1453	chr3R	9319561	9319601	chr3R	9320015	9320052	jockey	12	454	4.5	5.0	4.8	2.1	491	chr3R	9319561	intron	CG8861 -	chr3R	9319806	intron	CG8861 -	chr3R	9320052	intron	CG8861 -	chr3R_12_9315001	chr3R_9315001	RAL-374
1459	chr3R	10231771	10231813	chr3R	10237368	10237408	mdg3	10	5596	2.5	3.0	2.8	2.6	5637	chr3R	10231771	intron	CG42795 +	chr3R	10234590	intron	CG42795 +	chr3R	10237408	intron	CG42795 +	chr3R_10_10230001	chr3R_10230001	RAL-374
1472	chr3R	10804159	10804206	chr3R	10811711	10811758	17.6	6	7552	2.0	2.5	2.2	1.9	7599	chr3R	10804159	intergenic	CG14692 -	chr3R	10807958	intergenic	not near genes	chr3R	10811758	3` UTR	CG14693 -	chr3R_6_10805001	chr3R_10805001	RAL-374
1487	chr3R	11379224	11379256	chr3R	11388395	11388427	roo	6	9174	5.0	3.5	4.2	1.2	9203	chr3R	11379224	intron	pros +	chr3R	11383826	intron	pros +	chr3R	11388427	intron	pros +	chr3R_6_11380001	chr3R_11380001	RAL-374
1495	chr3R	11841052	11841083	chr3R	11846262	11846294	BS	6	5208	4.5	2.5	3.5	1.3	5242	chr3R	11841052	intron	CG6959 -	chr3R	11843673	intron	CG6959 -	chr3R	11846294	intron	CG6959 -	chr3R_6_11840001	chr3R_11840001	RAL-374
1498	chr3R	11957833	11957861	chr3R	11958136	11958163	S-element	5	303	2.5	0.0	1.2	2.3	330	chr3R	11957833	intergenic	not near genes	chr3R	11957998	intergenic	not near genes	chr3R	11958163	intergenic	not near genes	chr3R_5_11955001	chr3R_11955001	RAL-374
1499	chr3R	12022864	12022913	chr3R	12025061	12025099	pogo	13	2195	3.0	3.5	3.2	3.1	2235	chr3R	12022864	intergenic	not near genes	chr3R	12023982	intergenic	not near genes	chr3R	12025099	intergenic	not near genes	chr3R_13_12020001	chr3R_12020001	RAL-374
1518	chr3R	12780260	12780286	chr3R	12780393	12780419	BS	5	130	3.0	0.5	1.8	1.8	159	chr3R	12780260	intron	beat-Vc -	chr3R	12780340	intron	beat-Vc -	chr3R	12780419	intron	beat-Vc -	chr3R_5_12780001	chr3R_12780001	RAL-374
1523	chr3R	12920161	12920181	chr3R	12925384	12925404	copia	4	5220	2.0	6.0	4.0	0.8	5243	chr3R	12920161	intron	beat-Vb +	chr3R	12922782	intron	beat-Vb +	chr3R	12925404	intron	beat-Vb +	chr3R_4_12920001	chr3R_12920001	RAL-374
1528	chr3R	13143015	13143064	chr3R	13148612	13148652	mdg3	7	5582	2.5	4.5	3.5	1.6	5637	chr3R	13143015	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13145834	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R	13148652	intron,intron,intron	timeout +,2mit -,CR45109 -	chr3R_7_13145001	chr3R_13145001	RAL-374
1535	chr3R	13517211	13517258	chr3R	13520047	13520094	jockey	5	2837	3.0	0.0	1.5	2.0	2883	chr3R	13517211	intergenic	not near genes	chr3R	13518652	intergenic	not near genes	chr3R	13520094	intergenic	not near genes	chr3R_5_13515001	chr3R_13515001	RAL-374
1545	chr3R	14021631	14021678	chr3R	14023468	14023514	S-element	14	1836	4.0	1.5	2.8	3.7	1883	chr3R	14021631	intron	rdx -	chr3R	14022572	intron	rdx -	chr3R	14023514	intron	rdx -	chr3R_14_14020001	chr3R_14020001	RAL-374
1550	chr3R	14180790	14180833	chr3R	14185575	14185618	F-element	7	4785	3.5	3.5	3.5	1.6	4828	chr3R	14180790	intron	Dop1R1 -	chr3R	14183204	intron	Dop1R1 -	chr3R	14185618	intron	Dop1R1 -	chr3R_7_14180001	chr3R_14180001	RAL-374
1551	chr3R	14194413	14194452	chr3R	14203582	14203620	roo	11	9168	4.0	4.0	4.0	2.2	9207	chr3R	14194413	intron	Dop1R1 -	chr3R	14199016	intron	Dop1R1 -	chr3R	14203620	intron	Dop1R1 -	chr3R_11_14195001	chr3R_14195001	RAL-374
1552	chr3R	14246387	14246401	chr3R	14247896	14247907	jockey	4	1510	3.5	4.0	3.8	0.8	1520	chr3R	14246387	intergenic	not near genes	chr3R	14247147	intergenic	not near genes	chr3R	14247907	intergenic	not near genes	chr3R_4_14245001	chr3R_14245001	RAL-374
1568	chr3R	15041422	15041438	chr3R	15045210	15045226	Doc	6	3788	0.0	4.5	2.2	1.9	3804	chr3R	15041422	intergenic	not near genes	chr3R	15043324	intergenic	not near genes	chr3R	15045226	intergenic	not near genes	chr3R_6_15040001	chr3R_15040001	RAL-374
1569	chr3R	15079789	15079837	chr3R	15080048	15080097	pogo	11	260	3.0	1.5	2.2	3.4	308	chr3R	15079789	3` UTR	CG6966 -	chr3R	15079943	3` UTR	CG6966 -	chr3R	15080097	3` UTR	CG6966 -	chr3R_11_15075001	chr3R_15075001	RAL-374
1570	chr3R	15102487	15102525	chr3R	15109762	15109800	412	5	7275	2.5	2.5	2.5	1.4	7313	chr3R	15102487	intron	CG42788 -	chr3R	15106144	intron	CG42788 -	chr3R	15109800	intron	CG42788 -	chr3R_5_15105001	chr3R_15105001	RAL-374
1571	chr3R	15132050	15132071	chr3R	15135129	15135151	Juan	8	3080	6.0	8.0	7.0	1.0	3101	chr3R	15132050	intergenic	CG42788 -	chr3R	15133600	intergenic	not near genes	chr3R	15135151	3` UTR	CG6912 -	chr3R_8_15130001	chr3R_15130001	RAL-374
1572	chr3R	15162527	15162542	chr3R	15167314	15167329	F-element	9	4786	4.5	2.0	3.2	2.1	4802	chr3R	15162527	intron	Gyc88E +	chr3R	15164928	intron	Gyc88E +	chr3R	15167329	intron	Gyc88E +	chr3R_9_15160001	chr3R_15160001	RAL-374
1579	chr3R	15601155	15601181	chr3R	15608694	15608723	412	8	7541	5.0	7.0	6.0	1.1	7568	chr3R	15601155	intergenic	not near genes	chr3R	15604939	intergenic	not near genes	chr3R	15608723	intergenic	not near genes	chr3R_8_15600001	chr3R_15600001	RAL-374
1580	chr3R	15618711	15618760	chr3R	15626205	15626254	blood	11	7494	1.0	3.5	2.2	3.4	7543	chr3R	15618711	intergenic	not near genes	chr3R	15622482	intergenic	not near genes	chr3R	15626254	intergenic	not near genes	chr3R_11_15620001	chr3R_15620001	RAL-374
1588	chr3R	16756309	16756333	chr3R	16762511	16762544	diver	6	6205	4.0	1.0	2.5	1.7	6235	chr3R	16756309	intron	bxd -	chr3R	16759426	intron	bxd -	chr3R	16762544	intron	bxd -	chr3R_6_16755001	chr3R_16755001	RAL-374
1595	chr3R	17294645	17294703	chr3R	17295093	17295153	BS	9	448	0.5	0.0	0.2	7.5	508	chr3R	17294645	intergenic	not near genes	chr3R	17294899	intergenic	not near genes	chr3R	17295153	intergenic	not near genes	chr3R_9_17290001	chr3R_17290001	RAL-374
1596	chr3R	17346672	17346706	chr3R	17348255	17348289	F-element	10	1583	1.5	2.5	2.0	3.3	1617	chr3R	17346672	intron	beat-IIa -	chr3R	17347480	intron	beat-IIa -	chr3R	17348289	intron	beat-IIa -	chr3R_10_17345001	chr3R_17345001	RAL-374
1610	chr3R	17925847	17925880	chr3R	17927331	17927335	hobo	7	1481	3.0	6.0	4.5	1.3	1488	chr3R	17925847	intron	cpo +	chr3R	17926591	intron	cpo +	chr3R	17927335	intron	cpo +	chr3R_7_17925001	chr3R_17925001	RAL-374
1621	chr3R	18606484	18606522	chr3R	18610736	18610774	F-element	9	4252	3.0	2.5	2.8	2.4	4290	chr3R	18606484	intron,intron	qin +,CG14304 -	chr3R	18608629	intron,intron	qin +,CG14304 -	chr3R	18610774	intron,intron	qin +,CG14304 -	chr3R_9_18605001	chr3R_18605001	RAL-374
1656	chr3R	20156681	20156714	chr3R	20165869	20165904	roo	5	9189	2.0	3.5	2.8	1.3	9223	chr3R	20156681	intergenic	not near genes	chr3R	20161292	intergenic	not near genes	chr3R	20165904	intergenic	not near genes	chr3R_5_20160001	chr3R_20160001	RAL-374
1660	chr3R	20266504	20266546	chr3R	20272995	20273036	Burdock	10	6491	0.5	3.0	1.8	3.6	6532	chr3R	20266504	intron	cic +	chr3R	20269770	intron	cic +	chr3R	20273036	intron	cic +	chr3R_10_20265001	chr3R_20265001	RAL-374
1663	chr3R	20330988	20331023	chr3R	20331494	20331529	roo	5	506	3.5	2.0	2.8	1.3	541	chr3R	20330988	intergenic	Sirt2 +	chr3R	20331258	intergenic	Sirt2 +	chr3R	20331529	intergenic	not near genes	chr3R_5_20330001	chr3R_20330001	RAL-374
1677	chr3R	20854469	20854501	chr3R	20859273	20859284	Doc	7	4800	7.0	3.0	5.0	1.2	4815	chr3R	20854469	intron	Ir93a -	chr3R	20856876	intron	Ir93a -	chr3R	20859284	exon	Ir93a -	chr3R_7_20855001	chr3R_20855001	RAL-374
1678	chr3R	20854510	20854517	chr3R	20859269	20859276	Doc	4	4764	6.0	2.5	4.2	0.8	4766	chr3R	20854510	intron	Ir93a -	chr3R	20856893	intron	Ir93a -	chr3R	20859276	exon	Ir93a -	chr3R_4_20855001	chr3R_20855001	RAL-374
1691	chr3R	21761107	21761154	chr3R	21768517	21768540	mdg1	10	7402	1.5	3.0	2.2	3.1	7433	chr3R	21761107	exon	CG42335 +	chr3R	21764824	intron	CG42335 +	chr3R	21768540	exon	CG42335 +	chr3R_10_21760001	chr3R_21760001	RAL-374
1706	chr3R	22234673	22234709	chr3R	22236012	22236048	pogo	7	1336	0.5	1.5	1.0	3.5	1375	chr3R	22234673	intron	SKIP +	chr3R	22235360	intron	SKIP +	chr3R	22236048	intron	SKIP +	chr3R_7_22235001	chr3R_22235001	RAL-374
1707	chr3R	22239471	22239512	chr3R	22248551	22248592	roo	10	9080	2.5	4.5	3.5	2.2	9121	chr3R	22239471	intron	SKIP +	chr3R	22244032	intron	SKIP +	chr3R	22248592	intron	SKIP +	chr3R_10_22240001	chr3R_22240001	RAL-374
1710	chr3R	22450527	22450573	chr3R	22453187	22453223	NOF	9	2653	4.0	3.5	3.8	1.9	2696	chr3R	22450527	intron	CG34376 +	chr3R	22451875	intron	CG34376 +	chr3R	22453223	intron	CG34376 +	chr3R_9_22450001	chr3R_22450001	RAL-374
1729	chr3R	23558388	23558419	chr3R	23560189	23560220	Bari1	8	1801	2.5	3.5	3.0	2.0	1832	chr3R	23558388	intron	beat-IV +	chr3R	23559304	intron	beat-IV +	chr3R	23560220	intron	beat-IV +	chr3R_8_23555001	chr3R_23555001	RAL-374
1736	chr3R	23835389	23835424	chr3R	23844559	23844594	roo	5	9168	2.0	3.0	2.5	1.4	9205	chr3R	23835389	intron	CG34355 +	chr3R	23839992	intron	CG34355 +	chr3R	23844594	intron	CG34355 +	chr3R_5_23835001	chr3R_23835001	RAL-374
1742	chr3R	24207216	24207241	chr3R	24212312	24212337	flea	6	5094	2.0	6.5	4.2	1.2	5121	chr3R	24207216	intron	twin -	chr3R	24209776	intron	twin -	chr3R	24212337	intron	twin -	chr3R_6_24205001	chr3R_24205001	RAL-374
1746	chr3R	24493259	24493304	chr3R	24493508	24493552	BS	5	249	4.0	2.5	3.2	1.2	293	chr3R	24493259	intergenic	not near genes	chr3R	24493406	intergenic	not near genes	chr3R	24493552	intergenic	not near genes	chr3R_5_24490001	chr3R_24490001	RAL-374
1750	chr3R	24730078	24730106	chr3R	24732469	24732477	Doc	7	2391	4.0	0.0	2.0	2.3	2399	chr3R	24730078	intron	tok +	chr3R	24731278	intron	tok +	chr3R	24732477	intron	tok +	chr3R_7_24730001	chr3R_24730001	RAL-374
1753	chr3R	24927112	24927154	chr3R	24931921	24931965	Doc	9	4808	2.0	1.0	1.5	3.6	4853	chr3R	24927112	intergenic	Trf4-2 +	chr3R	24929538	intergenic	not near genes	chr3R	24931965	intergenic	CG11771 +	chr3R_9_24925001	chr3R_24925001	RAL-374
1773	chr3R	25725812	25725857	chr3R	25734992	25735037	roo	6	9180	1.0	2.5	1.8	2.1	9225	chr3R	25725812	intron	LpR2 -	chr3R	25730424	intron	LpR2 -	chr3R	25735037	intron	LpR2 -	chr3R_6_25730001	chr3R_25730001	RAL-374
1777	chr3R	25832682	25832724	chr3R	25841878	25841918	roo	12	9197	3.5	1.5	2.5	3.4	9236	chr3R	25832682	exon	alpha4GT2 +	chr3R	25837300	intron	alpha4GT2 +	chr3R	25841918	exon	alpha4GT2 +	chr3R_12_25835001	chr3R_25835001	RAL-374
1793	chr3R	26376315	26376343	chr3R	26385495	26385523	roo	4	9176	5.5	0.0	2.8	1.1	9208	chr3R	26376315	intergenic	not near genes	chr3R	26380919	intergenic	not near genes	chr3R	26385523	intergenic	not near genes	chr3R_4_26380001	chr3R_26380001	RAL-374
1798	chr3R	26510501	26510535	chr3R	26519576	26519610	roo	5	9075	1.5	3.0	2.2	1.6	9109	chr3R	26510501	intron	plum -	chr3R	26515056	intron	plum -	chr3R	26519610	intron,5` UTR	plum -,CR45226 +	chr3R_5_26515001	chr3R_26515001	RAL-374
1800	chr3R	26558332	26558361	chr3R	26565648	26565693	Stalker4	6	7326	2.5	2.5	2.5	1.7	7361	chr3R	26558332	intron	scrib +	chr3R	26562012	intron	scrib +	chr3R	26565693	intron	scrib +	chr3R_6_26560001	chr3R_26560001	RAL-374
1803	chr3R	26642729	26642762	chr3R	26643143	26643176	jockey	8	412	4.5	4.5	4.5	1.5	447	chr3R	26642729	intergenic	not near genes	chr3R	26642952	intergenic	not near genes	chr3R	26643176	intergenic	not near genes	chr3R_8_26640001	chr3R_26640001	RAL-374
1807	chr3R	26810548	26810586	chr3R	26811053	26811091	roo	7	505	3.5	2.5	3.0	1.8	543	chr3R	26810548	intron	Tl +	chr3R	26810820	intron	Tl +	chr3R	26811091	intron	Tl +	chr3R_7_26810001	chr3R_26810001	RAL-374
1812	chr3R	27007361	27007437	chr3R	27016543	27016592	roo	8	9158	0.0	5.0	2.5	2.3	9231	chr3R	27007361	intron	RYa-R +	chr3R	27011976	intron	RYa-R +	chr3R	27016592	intron	RYa-R +	chr3R_8_27010001	chr3R_27010001	RAL-374
1813	chr3R	27140499	27140537	chr3R	27148129	27148167	412	11	7628	6.5	6.0	6.2	1.5	7668	chr3R	27140499	intron	CG6051 -	chr3R	27144333	intron	CG6051 -	chr3R	27148167	intron	CG6051 -	chr3R_11_27140001	chr3R_27140001	RAL-374
1819	chr3R	27342781	27342821	chr3R	27351381	27351421	Tirant	8	8600	1.5	2.5	2.0	2.7	8640	chr3R	27342781	intron	CG42534 +	chr3R	27347101	intron	CG42534 +	chr3R	27351421	intron	CG42534 +	chr3R_8_27345001	chr3R_27345001	RAL-374
1830	chr3R	27856747	27856786	chr3R	27858250	27858288	hopper2	7	1502	7.0	4.0	5.5	1.1	1541	chr3R	27856747	intron	CG34353 -	chr3R	27857518	intron	CG34353 -	chr3R	27858288	intron	CG34353 -	chr3R_7_27855001	chr3R_27855001	RAL-374
1831	chr3R	27862939	27862978	chr3R	27868263	27868284	Transpac	10	5322	1.5	2.0	1.8	3.6	5345	chr3R	27862939	intron	CG34353 -	chr3R	27865612	intron	CG34353 -	chr3R	27868284	intron	CG34353 -	chr3R_10_27865001	chr3R_27865001	RAL-374
1832	chr3R	27875687	27875729	chr3R	27882756	27882804	297	9	7074	1.5	4.5	3.0	2.2	7117	chr3R	27875687	intron	CG34353 -	chr3R	27879246	intron	CG34353 -	chr3R	27882804	intron	CG34353 -	chr3R_9_27875001	chr3R_27875001	RAL-374
1835	chr3R	28068492	28068527	chr3R	28073952	28073986	I-element	11	5460	0.0	2.5	1.2	5.0	5494	chr3R	28068492	intron	CG34362 +	chr3R	28071239	intron	CG34362 +	chr3R	28073986	intron	CG34362 +	chr3R_11_28070001	chr3R_28070001	RAL-374
1839	chr3R	28173659	28173701	chr3R	28181109	28181150	mdg1	5	7448	1.0	1.5	1.2	2.3	7491	chr3R	28173659	intron	CG34354 +	chr3R	28177404	intron	CG34354 +	chr3R	28181150	intron	CG34354 +	chr3R_5_28175001	chr3R_28175001	RAL-374
1841	chr3R	28253324	28253369	chr3R	28255854	28255899	jockey	9	2530	0.5	3.0	1.8	3.2	2575	chr3R	28253324	intergenic	not near genes	chr3R	28254612	intergenic	not near genes	chr3R	28255899	intergenic	not near genes	chr3R_9_28250001	chr3R_28250001	RAL-374
1844	chr3R	28302088	28302123	chr3R	28302547	28302582	jockey	9	457	6.5	4.5	5.5	1.4	494	chr3R	28302088	intergenic	not near genes	chr3R	28302335	intergenic	not near genes	chr3R	28302582	intergenic	not near genes	chr3R_9_28300001	chr3R_28300001	RAL-374
1848	chr3R	28792853	28792898	chr3R	28797968	28798010	jockey	7	5113	1.0	1.5	1.2	3.2	5157	chr3R	28792853	intergenic	not near genes	chr3R	28795432	intergenic	not near genes	chr3R	28798010	intergenic	not near genes	chr3R_7_28795001	chr3R_28795001	RAL-374
1857	chr3R	29079368	29079401	chr3R	29080753	29080793	NOF	5	1390	4.0	1.5	2.8	1.3	1425	chr3R	29079368	intron	CG11873 +	chr3R	29080080	intron	CG11873 +	chr3R	29080793	intron	CG11873 +	chr3R_5_29080001	chr3R_29080001	RAL-374
1863	chr3R	29319817	29319851	chr3R	29320156	29320188	jockey	10	338	1.0	4.5	2.8	2.6	371	chr3R	29319817	intergenic	Cnx99A -	chr3R	29320002	intergenic	Cnx99A -	chr3R	29320188	intergenic	not near genes	chr3R_10_29320001	chr3R_29320001	RAL-374
1868	chr3R	29406600	29406644	chr3R	29407906	29407929	jockey	14	1300	0.0	6.5	3.2	3.3	1329	chr3R	29406600	intron	Ptp99A +	chr3R	29407264	intron	Ptp99A +	chr3R	29407929	intron	Ptp99A +	chr3R_14_29405001	chr3R_29405001	RAL-374
1878	chr3R	29738253	29738295	chr3R	29739740	29739782	hobo	15	1484	2.5	4.0	3.2	3.6	1529	chr3R	29738253	intergenic	CG1969 +,CG7598 +	chr3R	29739018	intron	CG1969 +	chr3R	29739782	5` UTR	CG1969 +	chr3R_15_29735001	chr3R_29735001	RAL-374
1879	chr3R	29760347	29760383	chr3R	29761568	29761604	pogo	8	1220	3.0	0.5	1.8	2.9	1257	chr3R	29760347	intergenic	not near genes	chr3R	29760976	intergenic	not near genes	chr3R	29761604	intergenic	not near genes	chr3R_8_29760001	chr3R_29760001	RAL-374
1883	chr3R	29882000	29882047	chr3R	29891177	29891224	roo	18	9176	1.5	3.0	2.2	5.6	9224	chr3R	29882000	intron	CG31038 +	chr3R	29886612	intron	CG31038 +	chr3R	29891224	intron	CG31038 +	chr3R_18_29885001	chr3R_29885001	RAL-374
1891	chr3R	30238751	30238797	chr3R	30239935	30239941	1360	9	1179	2.0	1.5	1.8	3.2	1190	chr3R	30238751	intergenic	not near genes	chr3R	30239346	intergenic	not near genes	chr3R	30239941	intergenic	not near genes	chr3R_9_30235001	chr3R_30235001	RAL-374
1893	chr3R	30317313	30317358	chr3R	30324924	30324970	roo	4	7612	1.0	5.0	3.0	1.0	7657	chr3R	30317313	intron	hdc +	chr3R	30321142	intron	hdc +	chr3R	30324970	intron	hdc +	chr3R_4_30320001	chr3R_30320001	RAL-374
1901	chr3R	30480472	30480493	chr3R	30482947	30482979	jockey	5	2483	4.0	5.5	4.8	0.9	2507	chr3R	30480472	intron	PH4alphaEFB +	chr3R	30481726	intron	PH4alphaEFB +	chr3R	30482979	intron	PH4alphaEFB +	chr3R_5_30480001	chr3R_30480001	RAL-374
1902	chr3R	30480498	30480511	chr3R	30482940	30482982	jockey	6	2474	3.5	5.0	4.2	1.2	2484	chr3R	30480498	intron	PH4alphaEFB +	chr3R	30481740	intron	PH4alphaEFB +	chr3R	30482982	intron	PH4alphaEFB +	chr3R_6_30480001	chr3R_30480001	RAL-374
1908	chr3R	30679501	30679550	chr3R	30686989	30687036	blood	9	7488	2.0	5.0	3.5	2.0	7535	chr3R	30679501	intergenic	not near genes	chr3R	30683268	intergenic	not near genes	chr3R	30687036	intergenic	not near genes	chr3R_9_30680001	chr3R_30680001	RAL-374
1916	chr3R	31074217	31074240	chr3R	31081834	31081849	springer	4	7616	3.5	2.0	2.8	1.1	7632	chr3R	31074217	intron	Sox100B +	chr3R	31078033	intron	Sox100B +	chr3R	31081849	intron	Sox100B +	chr3R_4_31075001	chr3R_31075001	RAL-374
1919	chr3R	31279369	31279398	chr3R	31285580	31285600	diver	7	6205	4.0	4.0	4.0	1.4	6231	chr3R	31279369	intergenic	not near genes	chr3R	31282484	intergenic	not near genes	chr3R	31285600	intergenic	not near genes	chr3R_7_31280001	chr3R_31280001	RAL-374
1922	chr3R	31413072	31413110	chr3R	31418292	31418311	copia	9	5215	1.0	0.0	0.5	6.0	5239	chr3R	31413072	intron	Gprk2 +	chr3R	31415692	intron	Gprk2 +	chr3R	31418311	intron	Gprk2 +	chr3R_9_31415001	chr3R_31415001	RAL-374
1927	chr3R	31691513	31691547	chr3R	31696299	31696309	Doc	9	4780	3.0	1.5	2.2	2.8	4796	chr3R	31691513	intergenic	not near genes	chr3R	31693911	intergenic	not near genes	chr3R	31696309	intergenic	not near genes	chr3R_9_31690001	chr3R_31690001	RAL-374
1932	chr3R	31997975	31998020	chr3R	32005462	32005510	blood	11	7489	1.5	2.5	2.0	3.7	7535	chr3R	31997975	intron	heph -	chr3R	32001742	intron	heph -	chr3R	32005510	intron	heph -	chr3R_11_32000001	chr3R_32000001	RAL-374
1937	chr4	662168	662205	chr4	662833	662870	INE-1	9	662	0.0	1.5	0.8	5.0	702	chr4	662168	intron	gw -	chr4	662519	intron	gw -	chr4	662870	5` UTR	gw -	chr4_9_660001	chr4_660001	RAL-374
1938	chr4	671587	671633	chr4	680187	680229	Tirant	15	8599	2.0	2.5	2.2	4.7	8642	chr4	671587	intron	CG11360 +	chr4	675908	intron	CG11360 +	chr4	680229	intron	CG11360 +	chr4_15_675001	chr4_675001	RAL-374
1939	chrX	295836	295875	chrX	303476	303514	412	5	7640	1.0	1.5	1.2	2.3	7678	chrX	295836	intron	CG3777 +	chrX	299675	intron	CG3777 +	chrX	303514	intron	CG3777 +	chrX_5_295001	chrX_295001	RAL-374
1940	chrX	318477	318496	chrX	323583	323602	flea	4	5106	2.0	3.5	2.8	1.1	5125	chrX	318477	intron,intron	CG3777 +,CG32816 -	chrX	321040	intron,intron	CG3777 +,CG32816 -	chrX	323602	intron,intron	CG3777 +,CG32816 -	chrX_4_320001	chrX_320001	RAL-374
1942	chrX	428398	428446	chrX	434603	434651	3S18	9	6205	3.5	0.5	2.0	3.0	6253	chrX	428398	intron	CG32816 -	chrX	431524	intron	CG32816 -	chrX	434651	intron	CG32816 -	chrX_9_430001	chrX_430001	RAL-374
1948	chrX	551421	551453	chrX	559000	559014	412	4	7574	2.0	2.0	2.0	1.3	7593	chrX	551421	intron	Appl +	chrX	555218	intron	Appl +	chrX	559014	intron	Appl +	chrX_4_555001	chrX_555001	RAL-374
1954	chrX	827587	827602	chrX	835399	835414	roo	4	7812	3.0	5.0	4.0	0.8	7827	chrX	827587	intron	CG43867 -	chrX	831500	intron	CG43867 -	chrX	835414	intron	CG43867 -	chrX_4_830001	chrX_830001	RAL-374
1955	chrX	827603	827632	chrX	835395	835429	roo	10	7805	1.5	5.0	3.2	2.4	7826	chrX	827603	intron	CG43867 -	chrX	831516	intron	CG43867 -	chrX	835429	intron	CG43867 -	chrX_10_830001	chrX_830001	RAL-374
1956	chrX	906689	906733	chrX	908498	908542	S-element	7	1808	2.5	4.5	3.5	1.6	1853	chrX	906689	intron	CG43867 -	chrX	907616	intron	CG43867 -	chrX	908542	intron	CG43867 -	chrX_7_905001	chrX_905001	RAL-374
1958	chrX	1357765	1357782	chrX	1367955	1367971	Doc	4	10189	4.0	3.0	3.5	0.9	10206	chrX	1357765	intergenic	png -	chrX	1362868	intergenic	not near genes	chrX	1367971	intergenic	not near genes	chrX_4_1360001	chrX_1360001	RAL-374
1959	chrX	1357784	1357797	chrX	1367941	1367987	Doc	5	10183	1.5	2.5	2.0	1.7	10203	chrX	1357784	intergenic	png -	chrX	1362886	intergenic	not near genes	chrX	1367987	intergenic	not near genes	chrX_5_1360001	chrX_1360001	RAL-374
1960	chrX	1518033	1518069	chrX	1523455	1523491	jockey	6	5420	1.5	3.5	2.5	1.7	5458	chrX	1518033	intergenic	inc +	chrX	1520762	intergenic	not near genes	chrX	1523491	intergenic	not near genes	chrX_6_1520001	chrX_1520001	RAL-374
1961	chrX	1627979	1627997	chrX	1635450	1635462	gtwin	4	7474	3.0	3.0	3.0	1.0	7483	chrX	1627979	intron,intron	Mur2B -,br +	chrX	1631720	intron,intron	Mur2B -,br +	chrX	1635462	intron,intron	Mur2B -,br +	chrX_4_1630001	chrX_1630001	RAL-374
1962	chrX	1930521	1930563	chrX	1938112	1938154	opus	7	7590	1.5	1.5	1.5	2.8	7633	chrX	1930521	intergenic	CG11596 +	chrX	1934338	intergenic	not near genes	chrX	1938154	3` UTR	CG3857 -	chrX_7_1930001	chrX_1930001	RAL-374
1967	chrX	2610373	2610378	chrX	2617510	2617515	HMS-Beagle	4	7137	3.5	2.5	3.0	1.0	7142	chrX	2610373	intergenic	CG8636 -	chrX	2613944	intergenic	not near genes	chrX	2617515	intergenic	Tsp3A -	chrX_4_2610001	chrX_2610001	RAL-374
1968	chrX	2664391	2664411	chrX	2665557	2665577	1360	5	1165	3.5	6.5	5.0	0.8	1186	chrX	2664391	intron	sgg +	chrX	2664984	intron	sgg +	chrX	2665577	intron	sgg +	chrX_5_2660001	chrX_2660001	RAL-374
1969	chrX	2844886	2844930	chrX	2852316	2852360	mdg1	6	7430	3.0	4.0	3.5	1.3	7474	chrX	2844886	intron	kirre +	chrX	2848623	intron	kirre +	chrX	2852360	intron	kirre +	chrX_6_2845001	chrX_2845001	RAL-374
1973	chrX	3058004	3058051	chrX	3058265	3058312	pogo	6	261	2.5	1.5	2.0	2.0	308	chrX	3058004	intron	kirre +	chrX	3058158	intron	kirre +	chrX	3058312	intron	kirre +	chrX_6_3055001	chrX_3055001	RAL-374
1974	chrX	3075617	3075661	chrX	3080940	3080987	Transpac	7	5325	2.0	3.0	2.5	2.0	5370	chrX	3075617	intron	kirre +	chrX	3078302	intron	kirre +	chrX	3080987	intron	kirre +	chrX_7_3075001	chrX_3075001	RAL-374
1978	chrX	3493077	3493115	chrX	3502256	3502293	roo	6	9177	1.0	1.0	1.0	3.0	9216	chrX	3493077	intron,intron	CR44999 +,Gas8 -	chrX	3497685	intron,intron	CR44999 +,Gas8 -	chrX	3502293	intron,intron	CR44999 +,Gas8 -	chrX_6_3495001	chrX_3495001	RAL-374
1979	chrX	3597535	3597575	chrX	3619723	3619762	roo	6	22188	2.5	1.5	2.0	2.0	22227	chrX	3597535	intron	AstA-R1 +	chrX	3608648	intron	AstA-R1 +	chrX	3619762	intron	AstA-R1 +	chrX_6_3605001	chrX_3605001	RAL-374
1982	chrX	3726745	3726769	chrX	3730160	3730186	NOF	6	3416	3.0	0.0	1.5	2.4	3441	chrX	3726745	intron	tlk +	chrX	3728466	intron	tlk +	chrX	3730186	intron	tlk +	chrX_6_3725001	chrX_3725001	RAL-374
1984	chrX	3986847	3986894	chrX	3994500	3994547	412	11	7653	3.0	1.5	2.2	3.4	7700	chrX	3986847	intergenic	not near genes	chrX	3990697	intergenic	not near genes	chrX	3994547	intergenic	not near genes	chrX_11_3990001	chrX_3990001	RAL-374
1986	chrX	4157881	4157912	chrX	4164954	4164985	297	6	7070	2.5	1.0	1.8	2.1	7104	chrX	4157881	intron	Fas2 -	chrX	4161433	intron	Fas2 -	chrX	4164985	intron	Fas2 -	chrX_6_4160001	chrX_4160001	RAL-374
1991	chrX	4700382	4700425	chrX	4700744	4700751	jockey	5	355	1.5	3.0	2.2	1.6	369	chrX	4700382	3` UTR	ctp +	chrX	4700566	3` UTR	ctp +	chrX	4700751	3` UTR	ctp +	chrX_5_4700001	chrX_4700001	RAL-374
1993	chrX	4763244	4763279	chrX	4763749	4763787	Stalker4	5	507	2.0	1.5	1.8	1.8	543	chrX	4763244	intergenic	not near genes	chrX	4763516	intergenic	not near genes	chrX	4763787	intergenic	not near genes	chrX_5_4760001	chrX_4760001	RAL-374
1994	chrX	4792367	4792395	chrX	4792820	4792832	jockey	7	450	1.0	2.0	1.5	2.8	465	chrX	4792367	intergenic	not near genes	chrX	4792600	intergenic	not near genes	chrX	4792832	intergenic	not near genes	chrX_7_4790001	chrX_4790001	RAL-374
1996	chrX	4827990	4828001	chrX	4835337	4835342	Stalker4	4	7353	1.5	3.0	2.2	1.2	7352	chrX	4827990	intergenic	not near genes	chrX	4831666	intergenic	not near genes	chrX	4835342	intergenic	not near genes	chrX_4_4830001	chrX_4830001	RAL-374
1998	chrX	5096267	5096293	chrX	5103838	5103878	springer	5	7581	2.0	1.0	1.5	2.0	7611	chrX	5096267	intron,intron	CG15465 +,rg +	chrX	5100072	intron,intron	CG15465 +,rg +	chrX	5103878	intron,intron	CG15465 +,rg +	chrX_5_5100001	chrX_5100001	RAL-374
2002	chrX	5883793	5883837	chrX	5884054	5884098	pogo	11	260	4.5	3.0	3.8	2.3	305	chrX	5883793	intron	CR45668 -	chrX	5883946	intron	CR45668 -	chrX	5884098	intron	CR45668 -	chrX_11_5880001	chrX_5880001	RAL-374
2003	chrX	5884145	5884191	chrX	5884406	5884452	pogo	12	261	2.5	2.0	2.2	3.8	307	chrX	5884145	intron	CR45668 -	chrX	5884298	intron	CR45668 -	chrX	5884452	intron	CR45668 -	chrX_12_5880001	chrX_5880001	RAL-374
2005	chrX	6171577	6171613	chrX	6179030	6179065	Quasimodo	5	7453	4.0	4.0	4.0	1.0	7488	chrX	6171577	intron	Ca-alpha1T -	chrX	6175321	intron	Ca-alpha1T -	chrX	6179065	intron	Ca-alpha1T -	chrX_5_6175001	chrX_6175001	RAL-374
2010	chrX	6335212	6335244	chrX	6337742	6337773	Tirant	5	2529	0.0	3.0	1.5	2.0	2561	chrX	6335212	intergenic	not near genes	chrX	6336492	intergenic	not near genes	chrX	6337773	5` UTR	CG3842 +	chrX_5_6335001	chrX_6335001	RAL-374
2011	chrX	6392865	6392891	chrX	6397634	6397676	Doc	6	4782	4.5	3.0	3.8	1.2	4811	chrX	6392865	intergenic	not near genes	chrX	6395270	intergenic	not near genes	chrX	6397676	intergenic	not near genes	chrX_6_6395001	chrX_6395001	RAL-374
2012	chrX	6562802	6562850	chrX	6571304	6571306	Tirant	7	8492	4.0	1.5	2.8	1.8	8504	chrX	6562802	intron	CG34417 +	chrX	6567054	intron	CG34417 +	chrX	6571306	intron	CG34417 +	chrX_7_6565001	chrX_6565001	RAL-374
2013	chrX	6605461	6605501	chrX	6608503	6608543	Burdock	7	3042	2.5	4.0	3.2	1.7	3082	chrX	6605461	intron	pigs +	chrX	6607002	intron	pigs +	chrX	6608543	intron	pigs +	chrX_7_6605001	chrX_6605001	RAL-374
2021	chrX	7023585	7023631	chrX	7030995	7031006	Tabor	5	7403	4.5	1.5	3.0	1.2	7421	chrX	7023585	intron	CG12541 -	chrX	7027296	intron	CG12541 -	chrX	7031006	intron	CG12541 -	chrX_5_7025001	chrX_7025001	RAL-374
2022	chrX	7125228	7125271	chrX	7134407	7134450	roo	9	9178	1.0	1.0	1.0	4.5	9222	chrX	7125228	intergenic	not near genes	chrX	7129839	intergenic	not near genes	chrX	7134450	intergenic	not near genes	chrX_9_7125001	chrX_7125001	RAL-374
2025	chrX	7702892	7702921	chrX	7703351	7703380	jockey	8	457	5.5	4.5	5.0	1.3	488	chrX	7702892	intron	CHES-1-like -	chrX	7703136	intron	CHES-1-like -	chrX	7703380	intron	CHES-1-like -	chrX_8_7700001	chrX_7700001	RAL-374
2027	chrX	8031423	8031447	chrX	8035751	8035776	Juan	10	4328	4.5	3.0	3.8	2.1	4353	chrX	8031423	intergenic	not near genes	chrX	8033600	intergenic	not near genes	chrX	8035776	3` UTR	CG2233 -	chrX_10_8030001	chrX_8030001	RAL-374
2028	chrX	8364834	8364878	chrX	8365251	8365312	BS	8	429	3.0	0.0	1.5	3.2	478	chrX	8364834	intron	nAChRalpha3 -	chrX	8365073	intron	nAChRalpha3 -	chrX	8365312	intron	nAChRalpha3 -	chrX_8_8365001	chrX_8365001	RAL-374
2033	chrX	8922313	8922356	chrX	8922767	8922809	jockey	8	450	1.5	2.5	2.0	2.7	496	chrX	8922313	intron	rdgA +	chrX	8922561	intron	rdgA +	chrX	8922809	intron	rdgA +	chrX_8_8920001	chrX_8920001	RAL-374
2034	chrX	8948741	8948787	chrX	8956271	8956317	roo	6	7530	1.5	1.5	1.5	2.4	7576	chrX	8948741	intron	rdgA +	chrX	8952529	intron	rdgA +	chrX	8956317	intron	rdgA +	chrX_6_8950001	chrX_8950001	RAL-374
2037	chrX	9508120	9508161	chrX	9509658	9509699	jockey	8	1533	1.5	2.0	1.8	2.9	1579	chrX	9508120	intron	CG32700 -	chrX	9508910	intron	CG32700 -	chrX	9509699	intron	CG32700 -	chrX_8_9505001	chrX_9505001	RAL-374
2043	chrX	10138201	10138247	chrX	10145725	10145771	412	7	7524	0.0	2.5	1.2	3.2	7570	chrX	10138201	intron,intron	RhoU +,CR44894 -	chrX	10141986	intron,intron	RhoU +,CR44894 -	chrX	10145771	intron,intron	RhoU +,CR44894 -	chrX_7_10140001	chrX_10140001	RAL-374
2047	chrX	10550861	10550885	chrX	10552330	10552368	hobo	5	1475	0.0	1.5	0.8	2.8	1507	chrX	10550861	intron	spri -	chrX	10551614	intron	spri -	chrX	10552368	intron	spri -	chrX_5_10550001	chrX_10550001	RAL-374
2048	chrX	10686041	10686076	chrX	10691198	10691233	roo	5	5157	2.0	3.0	2.5	1.4	5192	chrX	10686041	intron	X11Lbeta +	chrX	10688637	intron	X11Lbeta +	chrX	10691233	intron	X11Lbeta +	chrX_5_10685001	chrX_10685001	RAL-374
2054	chrX	11095983	11096012	chrX	11103105	11103134	HMS-Beagle	5	7122	2.5	4.5	3.5	1.1	7151	chrX	11095983	intergenic	not near genes	chrX	11099558	intergenic	not near genes	chrX	11103134	intron	CG42249 +	chrX_5_11095001	chrX_11095001	RAL-374
2057	chrX	11184229	11184255	chrX	11189326	11189354	flea	5	5096	1.5	0.0	0.8	2.8	5125	chrX	11184229	intergenic	not near genes	chrX	11186792	intergenic	not near genes	chrX	11189354	intergenic	not near genes	chrX_5_11185001	chrX_11185001	RAL-374
2062	chrX	11633396	11633432	chrX	11640470	11640506	297	6	7072	6.5	3.5	5.0	1.0	7110	chrX	11633396	intron	Ptp10D +	chrX	11636951	intron	Ptp10D +	chrX	11640506	intron	Ptp10D +	chrX_6_11635001	chrX_11635001	RAL-374
2063	chrX	11645096	11645137	chrX	11648285	11648327	NOF	6	3189	1.5	1.0	1.2	2.7	3231	chrX	11645096	intron	Ptp10D +	chrX	11646712	intron	Ptp10D +	chrX	11648327	intron	Ptp10D +	chrX_6_11645001	chrX_11645001	RAL-374
2081	chrX	13401477	13401500	chrX	13401849	13401872	jockey	4	372	3.0	2.0	2.5	1.1	395	chrX	13401477	intergenic	CG1673 +,CG12725 -	chrX	13401674	intergenic	CG12725 -,CG1673 +	chrX	13401872	3` UTR	CG12725 -	chrX_4_13400001	chrX_13400001	RAL-374
2083	chrX	14105016	14105046	chrX	14114185	14114198	roo	6	9163	2.0	1.5	1.8	2.1	9182	chrX	14105016	intergenic	not near genes	chrX	14109607	intergenic	not near genes	chrX	14114198	5` UTR	CR44657 +	chrX_6_14105001	chrX_14105001	RAL-374
2091	chrX	14636447	14636486	chrX	14641907	14641947	I-element	8	5456	3.0	3.5	3.2	1.9	5500	chrX	14636447	intron	NetA -	chrX	14639197	intron	NetA -	chrX	14641947	intron	NetA -	chrX_8_14635001	chrX_14635001	RAL-374
2094	chrX	14778018	14778043	chrX	14782835	14782860	Doc	6	4817	3.5	3.0	3.2	1.4	4842	chrX	14778018	intergenic	CG5347 +	chrX	14780439	intergenic	not near genes	chrX	14782860	intergenic	Ag5r2 -	chrX_6_14780001	chrX_14780001	RAL-374
2095	chrX	14818763	14818793	chrX	14823972	14824017	copia	4	5216	2.0	2.5	2.2	1.2	5254	chrX	14818763	intron	rut -	chrX	14821390	intron	rut -	chrX	14824017	intron	rut -	chrX_4_14820001	chrX_14820001	RAL-374
2096	chrX	14936846	14936882	chrX	14946115	14946159	roo	4	9275	1.0	3.0	2.0	1.3	9313	chrX	14936846	intron	pdgy -	chrX	14941502	intron	pdgy -	chrX	14946159	intron	pdgy -	chrX_4_14940001	chrX_14940001	RAL-374
2099	chrX	15273692	15273732	chrX	15274873	15274912	1360	7	1174	3.0	1.0	2.0	2.3	1220	chrX	15273692	intergenic	not near genes	chrX	15274302	intergenic	not near genes	chrX	15274912	intergenic	not near genes	chrX_7_15270001	chrX_15270001	RAL-374
2100	chrX	15413056	15413069	chrX	15417362	15417390	Juan	6	4313	2.5	3.5	3.0	1.5	4334	chrX	15413056	intron	Cngl -	chrX	15415223	intron	Cngl -	chrX	15417390	intron	Cngl -	chrX_6_15415001	chrX_15415001	RAL-374
2101	chrX	15435690	15435701	chrX	15436143	15436154	rover	4	452	0.0	8.5	4.2	0.8	464	chrX	15435690	intron	Cngl -	chrX	15435922	intron	Cngl -	chrX	15436154	intron	Cngl -	chrX_4_15435001	chrX_15435001	RAL-374
2109	chrX	16492627	16492675	chrX	16498224	16498272	mdg3	11	5597	2.5	4.0	3.2	2.6	5645	chrX	16492627	intron	para -	chrX	16495450	intron	para -	chrX	16498272	exon	para -	chrX_11_16495001	chrX_16495001	RAL-374
2119	chrX	17195185	17195230	chrX	17200291	17200335	flea	11	5106	2.5	2.5	2.5	3.1	5150	chrX	17195185	3` UTR	baz +	chrX	17197760	3` UTR	baz +	chrX	17200335	3` UTR	baz +	chrX_11_17195001	chrX_17195001	RAL-374
2135	chrX	18194053	18194095	chrX	18194608	18194650	BS	5	554	2.5	3.0	2.8	1.3	597	chrX	18194053	intron	Frq2 +	chrX	18194352	intron	Frq2 +	chrX	18194650	intron	Frq2 +	chrX_5_18190001	chrX_18190001	RAL-374
2138	chrX	18429475	18429515	chrX	18434806	18434845	Transpac	8	5330	4.0	1.0	2.5	2.3	5370	chrX	18429475	intergenic	not near genes	chrX	18432160	intergenic	not near genes	chrX	18434845	intergenic	not near genes	chrX_8_18430001	chrX_18430001	RAL-374
2147	chrX	19060393	19060434	chrX	19065197	19065238	Doc	8	4804	1.0	3.0	2.0	2.7	4845	chrX	19060393	intron	CG14190 +	chrX	19062816	intron	CG14190 +	chrX	19065238	intron	CG14190 +	chrX_8_19060001	chrX_19060001	RAL-374
2157	chrX	19356969	19357000	chrX	19358430	19358457	NOF	6	1460	5.0	0.5	2.8	1.6	1488	chrX	19356969	intron	kek5 +	chrX	19357713	intron	kek5 +	chrX	19358457	intron	kek5 +	chrX_6_19355001	chrX_19355001	RAL-374
2158	chrX	19380149	19380179	chrX	19380402	19380440	pogo	8	258	4.0	4.0	4.0	1.6	291	chrX	19380149	intron	kek5 +	chrX	19380294	intron	kek5 +	chrX	19380440	intron	kek5 +	chrX_8_19380001	chrX_19380001	RAL-374
2159	chrX	19472103	19472159	chrX	19472693	19472697	jockey	13	580	1.0	5.0	3.0	3.2	594	chrX	19472103	intergenic	kek5 +	chrX	19472400	intergenic	kek5 +	chrX	19472697	intergenic	not near genes	chrX_13_19470001	chrX_19470001	RAL-374
2161	chrX	19710057	19710104	chrX	19711858	19711910	S-element	10	1802	0.5	3.0	1.8	3.6	1853	chrX	19710057	intron	meso18E -	chrX	19710984	intron	meso18E -	chrX	19711910	intron	meso18E -	chrX_10_19710001	chrX_19710001	RAL-374
2172	chrX	20377327	20377346	chrX	20378784	20378805	hobo	8	1472	3.5	2.0	2.8	2.1	1478	chrX	20377327	intergenic	not near genes	chrX	20378066	intergenic	not near genes	chrX	20378805	intergenic	not near genes	chrX_8_20375001	chrX_20375001	RAL-374
2181	chrX	20836719	20836740	chrX	20844341	20844347	roo	4	7618	0.5	5.0	2.8	1.1	7628	chrX	20836719	intron	shakB -	chrX	20840533	intron	shakB -	chrX	20844347	intron	shakB -	chrX_4_20840001	chrX_20840001	RAL-374
2182	chrX	20940703	20940750	chrX	20942192	20942229	hobo	7	1487	3.0	2.5	2.8	1.8	1526	chrX	20940703	intergenic	not near genes	chrX	20941466	intergenic	not near genes	chrX	20942229	intergenic	not near genes	chrX_7_20940001	chrX_20940001	RAL-374
2185	chrX	21086123	21086162	chrX	21087157	21087196	jockey	12	1045	4.0	4.0	4.0	2.4	1073	chrX	21086123	intergenic	not near genes	chrX	21086660	intergenic	not near genes	chrX	21087196	intergenic	not near genes	chrX_12_21085001	chrX_21085001	RAL-374
2192	chrX	21458681	21458724	chrX	21464137	21464178	Ivk	12	5455	2.0	3.5	2.8	3.2	5497	chrX	21458681	intergenic	not near genes	chrX	21461430	intergenic	not near genes	chrX	21464178	intergenic	not near genes	chrX_12_21460001	chrX_21460001	RAL-374
2197	chrX	22259784	22259791	chrX	22260224	22260228	rover	5	440	64.0	8.5	36.2	0.1	444	chrX	22259784	intergenic	not near genes	chrX	22260006	intergenic	not near genes	chrX	22260228	intergenic	not near genes	chrX_5_22260001	chrX_22260001	RAL-374
2200	chrX	22522618	22522649	chrX	22525458	22525478	NOF	10	2838	3.5	1.0	2.2	3.1	2860	chrX	22522618	intron	CG17600 +	chrX	22524048	intron	CG17600 +	chrX	22525478	intron	CG17600 +	chrX_10_22520001	chrX_22520001	RAL-374
2201	chrX	22564562	22564567	chrX	22575114	22575147	jockey	8	10556	9.5	4.5	7.0	1.0	10585	chrX	22564562	intergenic	not near genes	chrX	22569854	intergenic	not near genes	chrX	22575147	intergenic	not near genes	chrX_8_22565001	chrX_22565001	RAL-374
2203	chrX	22697485	22697517	chrX	22701802	22701834	Juan	7	4317	4.0	1.5	2.8	1.8	4349	chrX	22697485	intron	CR44997 +	chrX	22699660	intron	CR44997 +	chrX	22701834	intron	CR44997 +	chrX_7_22695001	chrX_22695001	RAL-374
2204	chrX	22771500	22771539	chrX	22774808	22774850	297	7	3310	2.0	3.0	2.5	2.0	3350	chrX	22771500	intron	CR44997 +	chrX	22773175	intron	CR44997 +	chrX	22774850	intron	CR44997 +	chrX_7_22770001	chrX_22770001	RAL-374
2208	chrX	22996296	22996332	chrX	23003550	23003586	roo	6	7254	5.0	3.5	4.2	1.2	7290	chrX	22996296	intron,intron	stnA -,stnB -	chrX	22999941	intron,intron	stnA -,stnB -	chrX	23003586	intron,intron	stnA -,stnB -	chrX_6_22995001	chrX_22995001	RAL-374