SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 46310 46374 chr2L 46433 46492 16 123 8.5 6.0 7.2 2.0 182 chr2L 46310 intron Cda5 - chr2L 46401 intron Cda5 - chr2L 46492 intron Cda5 - chr2L_16_45001 chr2L_45001 RAL-373_125b 2 chr2L 47428 47478 chr2L 52583 52628 jockey 23 5152 10.5 9.0 9.8 2.1 5200 chr2L 47428 intron Cda5 - chr2L 50028 intron Cda5 - chr2L 52628 intron Cda5 - chr2L_23_50001 chr2L_50001 RAL-373_125b 3 chr2L 62030 62080 chr2L 62237 62297 16 213 47.5 40.5 44.0 0.4 267 chr2L 62030 intron Cda5 - chr2L 62164 intron Cda5 - chr2L 62297 intron Cda5 - chr2L_16_60001 chr2L_60001 RAL-373_125b 4 chr2L 79788 79857 chr2L 80182 80251 24 387 5.0 5.5 5.2 3.9 463 chr2L 79788 intergenic not near genes chr2L 80020 intergenic not near genes chr2L 80251 intergenic not near genes chr2L_24_80001 chr2L_80001 RAL-373_125b 5 chr2L 89694 89740 chr2L 89791 89867 17 113 9.0 7.5 8.2 1.8 173 chr2L 89694 intergenic not near genes chr2L 89780 intergenic not near genes chr2L 89867 intergenic not near genes chr2L_17_85001 chr2L_85001 RAL-373_125b 6 chr2L 172016 172083 chr2L 172147 172214 18 129 4.0 4.0 4.0 3.6 198 chr2L 172016 intron spen + chr2L 172115 intron spen + chr2L 172214 intron spen + chr2L_18_170001 chr2L_170001 RAL-373_125b 7 chr2L 263267 263330 chr2L 263458 263515 8 193 1.5 6.0 3.8 1.7 248 chr2L 263267 intron,3` UTR CG3645 -,CG17075 - chr2L 263391 intron,3` UTR CG3645 -,CG17075 - chr2L 263515 intron,3` UTR CG3645 -,CG17075 - chr2L_8_260001 chr2L_260001 RAL-373_125b 8 chr2L 297655 297715 chr2L 297795 297843 19 143 5.0 5.5 5.2 3.1 188 chr2L 297655 intergenic Hop +,Pi3K21B + chr2L 297749 intergenic Pi3K21B +,Hop + chr2L 297843 intergenic Pi3K21B +,Hop + chr2L_19_295001 chr2L_295001 RAL-373_125b 9 chr2L 325110 325145 chr2L 325235 325265 12 122 10.5 8.0 9.2 1.2 155 chr2L 325110 intron Plc21C + chr2L 325188 intron Plc21C + chr2L 325265 intron Plc21C + chr2L_12_325001 chr2L_325001 RAL-373_125b 10 chr2L 347848 347899 chr2L 355388 355449 blood 14 7545 7.0 2.0 4.5 2.5 7601 chr2L 347848 3` UTR Plc21C + chr2L 351648 intron Plc21C + chr2L 355449 3` UTR Plc21C + chr2L_14_350001 chr2L_350001 RAL-373_125b 11 chr2L 371401 371451 chr2L 371530 371580 9 127 7.0 7.0 7.0 1.1 179 chr2L 371401 intergenic not near genes chr2L 371490 intergenic not near genes chr2L 371580 intergenic not near genes chr2L_9_370001 chr2L_370001 RAL-373_125b 12 chr2L 407913 407970 chr2L 408034 408091 17 129 6.5 6.5 6.5 2.3 178 chr2L 407913 3` UTR RpI135 + chr2L 408002 intergenic AP-2alpha -,RpI135 + chr2L 408091 3` UTR AP-2alpha - chr2L_17_405001 chr2L_405001 RAL-373_125b 13 chr2L 428068 428088 chr2L 428182 428204 5 110 10.5 14.5 12.5 0.4 136 chr2L 428068 intergenic not near genes chr2L 428136 intergenic not near genes chr2L 428204 intergenic not near genes chr2L_5_425001 chr2L_425001 RAL-373_125b 14 chr2L 590578 590585 chr2L 590729 590734 4 148 18.0 6.5 12.2 0.3 156 chr2L 590578 intron Gsc - chr2L 590656 intron Gsc - chr2L 590734 intron Gsc - chr2L_4_590001 chr2L_590001 RAL-373_125b 15 chr2L 590591 590648 chr2L 590721 590794 15 140 4.0 5.0 4.5 2.7 203 chr2L 590591 intron Gsc - chr2L 590692 intron Gsc - chr2L 590794 intron Gsc - chr2L_15_590001 chr2L_590001 RAL-373_125b 16 chr2L 630282 630332 chr2L 630419 630469 10 140 5.0 8.5 6.8 1.3 187 chr2L 630282 intergenic not near genes chr2L 630376 intergenic not near genes chr2L 630469 intergenic not near genes chr2L_10_630001 chr2L_630001 RAL-373_125b 17 chr2L 668383 668458 chr2L 668513 668589 12 125 3.0 2.5 2.8 3.2 206 chr2L 668383 intron ds - chr2L 668486 intron ds - chr2L 668589 intron ds - chr2L_12_665001 chr2L_665001 RAL-373_125b 18 chr2L 680684 680712 chr2L 680892 680920 7 203 5.5 6.5 6.0 1.0 236 chr2L 680684 intron ds - chr2L 680802 intron ds - chr2L 680920 intron ds - chr2L_7_680001 chr2L_680001 RAL-373_125b 19 chr2L 686912 686938 chr2L 695992 696013 roo 7 9086 7.0 6.0 6.5 0.9 9101 chr2L 686912 intron ds - chr2L 691462 intron ds - chr2L 696013 intron ds - chr2L_7_690001 chr2L_690001 RAL-373_125b 20 chr2L 764504 764560 chr2L 764654 764710 5 150 6.5 6.0 6.2 0.7 206 chr2L 764504 intergenic not near genes chr2L 764607 intergenic not near genes chr2L 764710 intergenic not near genes chr2L_5_760001 chr2L_760001 RAL-373_125b 21 chr2L 770449 770492 chr2L 772250 772277 Bari1 9 1816 5.5 7.5 6.5 1.2 1828 chr2L 770449 intergenic not near genes chr2L 771363 intergenic not near genes chr2L 772277 intergenic CR44614 + chr2L_9_770001 chr2L_770001 RAL-373_125b 22 chr2L 877808 877872 chr2L 877939 878000 16 126 2.5 6.0 4.2 3.1 192 chr2L 877808 3` UTR,exon CG15824 -,ninaA + chr2L 877904 3` UTR,intron CG15824 -,ninaA + chr2L 878000 3` UTR,exon CG15824 -,ninaA + chr2L_16_875001 chr2L_875001 RAL-373_125b 23 chr2L 922421 922484 chr2L 922552 922614 15 127 5.5 5.0 5.2 2.4 193 chr2L 922421 intergenic CG4341 + chr2L 922518 intergenic CG4341 + chr2L 922614 intergenic CG4341 + chr2L_15_920001 chr2L_920001 RAL-373_125b 24 chr2L 924543 924623 chr2L 924867 924944 10 321 7.5 0.0 3.8 2.1 401 chr2L 924543 intron CG4341 + chr2L 924744 intron CG4341 + chr2L 924944 intron CG4341 + chr2L_10_920001 chr2L_920001 RAL-373_125b 25 chr2L 927853 927878 chr2L 928040 928077 10 197 4.5 9.5 7.0 1.2 224 chr2L 927853 intron CG4341 + chr2L 927965 intron CG4341 + chr2L 928077 intron CG4341 + chr2L_10_925001 chr2L_925001 RAL-373_125b 26 chr2L 964533 964557 chr2L 964665 964691 6 133 5.5 8.0 6.8 0.8 158 chr2L 964533 intergenic not near genes chr2L 964612 intergenic not near genes chr2L 964691 intergenic not near genes chr2L_6_960001 chr2L_960001 RAL-373_125b 27 chr2L 964559 964575 chr2L 964661 964704 4 122 4.0 8.0 6.0 0.6 145 chr2L 964559 intergenic not near genes chr2L 964632 intergenic not near genes chr2L 964704 intergenic not near genes chr2L_4_960001 chr2L_960001 RAL-373_125b 28 chr2L 976829 976869 chr2L 984515 984545 roo 10 7684 4.0 0.5 2.2 3.1 7716 chr2L 976829 intergenic not near genes chr2L 980687 intergenic not near genes chr2L 984545 intergenic not near genes chr2L_10_980001 chr2L_980001 RAL-373_125b 29 chr2L 990097 990122 chr2L 990354 990354 5 247 11.0 0.0 5.5 0.8 257 chr2L 990097 3` UTR CR44801 - chr2L 990226 3` UTR CR44801 - chr2L 990354 intron CR44801 - chr2L_5_990001 chr2L_990001 RAL-373_125b 30 chr2L 990126 990168 chr2L 990347 990433 20 248 5.0 0.0 2.5 5.7 307 chr2L 990126 3` UTR CR44801 - chr2L 990280 3` UTR CR44801 - chr2L 990433 intron CR44801 - chr2L_20_990001 chr2L_990001 RAL-373_125b 31 chr2L 1036419 1036474 chr2L 1036550 1036600 12 130 9.0 1.0 5.0 2.0 181 chr2L 1036419 intron IA-2 - chr2L 1036510 intron IA-2 - chr2L 1036600 intron IA-2 - chr2L_12_1035001 chr2L_1035001 RAL-373_125b 32 chr2L 1042622 1042636 chr2L 1042749 1042763 5 127 0.0 2.5 1.2 2.3 141 chr2L 1042622 intron IA-2 - chr2L 1042692 intron IA-2 - chr2L 1042763 intron IA-2 - chr2L_5_1040001 chr2L_1040001 RAL-373_125b 33 chr2L 1156830 1156893 chr2L 1156970 1157016 19 147 2.5 5.0 3.8 4.0 186 chr2L 1156830 intron capt - chr2L 1156923 intron capt - chr2L 1157016 intron capt - chr2L_19_1155001 chr2L_1155001 RAL-373_125b 34 chr2L 1220104 1220159 chr2L 1227598 1227669 blood 20 7512 5.5 4.0 4.8 3.4 7565 chr2L 1220104 intron CG42329 + chr2L 1223886 intron CG42329 + chr2L 1227669 intron CG42329 + chr2L_20_1220001 chr2L_1220001 RAL-373_125b 35 chr2L 1261209 1261241 chr2L 1261329 1261371 4 128 0.0 3.5 1.8 1.4 162 chr2L 1261209 intron robo3 + chr2L 1261290 intron robo3 + chr2L 1261371 intron robo3 + chr2L_4_1260001 chr2L_1260001 RAL-373_125b 36 chr2L 1287243 1287316 chr2L 1287369 1287422 12 121 4.5 8.0 6.2 1.7 179 chr2L 1287243 exon robo3 + chr2L 1287332 intron robo3 + chr2L 1287422 intron robo3 + chr2L_12_1285001 chr2L_1285001 RAL-373_125b 37 chr2L 1318796 1318868 chr2L 1318981 1319037 17 182 4.0 3.5 3.8 3.5 241 chr2L 1318796 intergenic not near genes chr2L 1318916 intergenic not near genes chr2L 1319037 intergenic not near genes chr2L_17_1315001 chr2L_1315001 RAL-373_125b 38 chr2L 1321986 1322050 chr2L 1322125 1322189 16 134 4.0 6.0 5.0 2.7 203 chr2L 1321986 intergenic not near genes chr2L 1322088 intergenic not near genes chr2L 1322189 intergenic not near genes chr2L_16_1320001 chr2L_1320001 RAL-373_125b 39 chr2L 1444363 1444417 chr2L 1445407 1445477 10 1053 3.0 6.0 4.5 1.8 1114 chr2L 1444363 intergenic not near genes chr2L 1444920 intergenic not near genes chr2L 1445477 intergenic not near genes chr2L_10_1440001 chr2L_1440001 RAL-373_125b 40 chr2L 1570656 1570711 chr2L 1573578 1573633 F-element 12 2920 4.5 8.5 6.5 1.6 2977 chr2L 1570656 intron haf + chr2L 1572144 intron haf + chr2L 1573633 intron haf + chr2L_12_1570001 chr2L_1570001 RAL-373_125b 41 chr2L 1590920 1590986 chr2L 1591041 1591066 21 120 8.0 4.0 6.0 3.0 146 chr2L 1590920 intron haf + chr2L 1590993 intron haf + chr2L 1591066 intron haf + chr2L_21_1590001 chr2L_1590001 RAL-373_125b 42 chr2L 1618222 1618236 chr2L 1618596 1618616 jockey 4 376 8.0 6.0 7.0 0.5 394 chr2L 1618222 intergenic CR44603 - chr2L 1618419 intergenic CR44603 - chr2L 1618616 intergenic CR44603 - chr2L_4_1615001 chr2L_1615001 RAL-373_125b 43 chr2L 1634717 1634749 chr2L 1634856 1634890 5 137 11.5 4.0 7.8 0.6 173 chr2L 1634717 intergenic not near genes chr2L 1634804 intergenic not near genes chr2L 1634890 intergenic not near genes chr2L_5_1630001 chr2L_1630001 RAL-373_125b 44 chr2L 1678937 1678991 chr2L 1686452 1686506 blood 20 7512 6.0 6.5 6.2 2.8 7569 chr2L 1678937 intron chinmo + chr2L 1682722 intron chinmo + chr2L 1686506 intron chinmo + chr2L_20_1680001 chr2L_1680001 RAL-373_125b 45 chr2L 1692030 1692092 chr2L 1692161 1692218 15 130 0.5 3.0 1.8 5.4 188 chr2L 1692030 intron chinmo + chr2L 1692124 intron chinmo + chr2L 1692218 intron chinmo + chr2L_15_1690001 chr2L_1690001 RAL-373_125b 46 chr2L 1711329 1711386 chr2L 1711687 1711760 mdg3 11 366 3.5 4.5 4.0 2.2 431 chr2L 1711329 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711544 3` UTR frtz - chr2L 1711760 exon frtz - chr2L_11_1710001 chr2L_1710001 RAL-373_125b 47 chr2L 1722056 1722088 chr2L 1722802 1722806 7 740 8.0 8.0 8.0 0.8 750 chr2L 1722056 intron Rim2 - chr2L 1722431 intron Rim2 - chr2L 1722806 intron Rim2 - chr2L_7_1720001 chr2L_1720001 RAL-373_125b 48 chr2L 1837758 1837763 chr2L 1838037 1838037 4 278 8.5 7.5 8.0 0.4 279 chr2L 1837758 intron wry + chr2L 1837898 intron wry + chr2L 1838037 intron wry + chr2L_4_1835001 chr2L_1835001 RAL-373_125b 49 chr2L 1837781 1837829 chr2L 1838030 1838070 7 259 2.0 5.5 3.8 1.5 289 chr2L 1837781 intron wry + chr2L 1837926 intron wry + chr2L 1838070 intron wry + chr2L_7_1835001 chr2L_1835001 RAL-373_125b 50 chr2L 1883379 1883444 chr2L 1884002 1884074 10 630 2.5 2.5 2.5 2.9 695 chr2L 1883379 intron CG15358 - chr2L 1883726 intron CG15358 - chr2L 1884074 intergenic CG15358 - chr2L_10_1880001 chr2L_1880001 RAL-373_125b 51 chr2L 1921104 1921146 chr2L 1921278 1921315 10 171 3.5 8.5 6.0 1.4 211 chr2L 1921104 intron CG7337 + chr2L 1921210 intron CG7337 + chr2L 1921315 intron CG7337 + chr2L_10_1920001 chr2L_1920001 RAL-373_125b 52 chr2L 1987936 1988010 chr2L 1988101 1988169 7 163 0.0 0.5 0.2 5.8 233 chr2L 1987936 intergenic Got2 -,Npc2a + chr2L 1988052 intergenic Npc2a +,Got2 - chr2L 1988169 intergenic Npc2a +,Got2 - chr2L_7_1985001 chr2L_1985001 RAL-373_125b 53 chr2L 2001747 2001813 chr2L 2001865 2001941 14 125 4.5 5.0 4.8 2.4 194 chr2L 2001747 intron,5` UTR CG33543 -,CR43464 + chr2L 2001844 intron,5` UTR CG33543 -,CR43464 + chr2L 2001941 intron,5` UTR CG33543 -,CR43464 + chr2L_14_2000001 chr2L_2000001 RAL-373_125b 54 chr2L 2016087 2016158 chr2L 2016209 2016278 11 126 4.0 6.5 5.2 1.8 191 chr2L 2016087 intron CG4238 + chr2L 2016182 intron CG4238 + chr2L 2016278 intron CG4238 + chr2L_11_2015001 chr2L_2015001 RAL-373_125b 55 chr2L 2073319 2073356 chr2L 2073435 2073447 8 117 6.5 17.0 11.8 0.6 128 chr2L 2073319 intron dpr3 - chr2L 2073383 intron dpr3 - chr2L 2073447 intron dpr3 - chr2L_8_2070001 chr2L_2070001 RAL-373_125b 56 chr2L 2090179 2090210 chr2L 2090482 2090503 9 297 10.5 5.5 8.0 1.0 324 chr2L 2090179 intron dpr3 - chr2L 2090341 intron dpr3 - chr2L 2090503 intron dpr3 - chr2L_9_2090001 chr2L_2090001 RAL-373_125b 57 chr2L 2090212 2090237 chr2L 2090481 2090536 6 292 7.0 5.5 6.2 0.8 324 chr2L 2090212 intron dpr3 - chr2L 2090374 intron dpr3 - chr2L 2090536 intron dpr3 - chr2L_6_2090001 chr2L_2090001 RAL-373_125b 58 chr2L 2100377 2100403 chr2L 2109533 2109551 roo 6 9178 8.0 7.5 7.8 0.7 9174 chr2L 2100377 intron dpr3 - chr2L 2104964 intron dpr3 - chr2L 2109551 intron dpr3 - chr2L_6_2100001 chr2L_2100001 RAL-373_125b 59 chr2L 2109920 2109966 chr2L 2110046 2110097 14 126 6.0 8.5 7.2 1.7 177 chr2L 2109920 intergenic dpr3 - chr2L 2110008 intergenic dpr3 - chr2L 2110097 intergenic dpr3 - chr2L_14_2110001 chr2L_2110001 RAL-373_125b 60 chr2L 2112094 2112137 chr2L 2119775 2119849 opus 14 7692 4.5 6.0 5.2 2.3 7755 chr2L 2112094 intergenic not near genes chr2L 2115972 intergenic not near genes chr2L 2119849 intergenic not near genes chr2L_14_2115001 chr2L_2115001 RAL-373_125b 61 chr2L 2244439 2244490 chr2L 2244603 2244654 13 163 3.5 10.5 7.0 1.6 215 chr2L 2244439 3` UTR CG4267 + chr2L 2244546 3` UTR CG4267 + chr2L 2244654 3` UTR CG4267 + chr2L_13_2240001 chr2L_2240001 RAL-373_125b 62 chr2L 2250393 2250444 chr2L 2251209 2251253 6 814 5.0 0.0 2.5 1.7 860 chr2L 2250393 intergenic Ser12 - chr2L 2250823 exon Ser12 - chr2L 2251253 exon Ser12 - chr2L_6_2250001 chr2L_2250001 RAL-373_125b 63 chr2L 2256431 2256472 chr2L 2256555 2256602 11 126 2.0 6.0 4.0 2.2 171 chr2L 2256431 intergenic not near genes chr2L 2256516 intergenic not near genes chr2L 2256602 intergenic not near genes chr2L_11_2255001 chr2L_2255001 RAL-373_125b 64 chr2L 2260769 2260811 chr2L 2260899 2260942 11 133 10.0 4.5 7.2 1.3 173 chr2L 2260769 intergenic not near genes chr2L 2260856 intergenic not near genes chr2L 2260942 intergenic not near genes chr2L_11_2260001 chr2L_2260001 RAL-373_125b 65 chr2L 2262292 2262341 chr2L 2262406 2262458 7 122 4.0 0.0 2.0 2.3 166 chr2L 2262292 intergenic not near genes chr2L 2262375 intergenic not near genes chr2L 2262458 intergenic not near genes chr2L_7_2260001 chr2L_2260001 RAL-373_125b 66 chr2L 2276561 2276622 chr2L 2278212 2278258 16 1651 38.5 54.5 46.5 0.3 1697 chr2L 2276561 intron CR43753 - chr2L 2277410 intron CR43753 - chr2L 2278258 intron CR43753 - chr2L_16_2275001 chr2L_2275001 RAL-373_125b 67 chr2L 2276570 2276631 chr2L 2278325 2278386 8 1756 37.0 64.0 50.5 0.2 1816 chr2L 2276570 intron CR43753 - chr2L 2277478 intron CR43753 - chr2L 2278386 intron CR43753 - chr2L_8_2275001 chr2L_2275001 RAL-373_125b 68 chr2L 2294023 2294031 chr2L 2299258 2299286 copia 6 5242 20.0 14.0 17.0 0.3 5263 chr2L 2294023 intergenic not near genes chr2L 2296654 intergenic not near genes chr2L 2299286 intergenic not near genes chr2L_6_2295001 chr2L_2295001 RAL-373_125b 69 chr2L 2294032 2294073 chr2L 2299249 2299303 copia 16 5233 7.5 11.0 9.2 1.6 5271 chr2L 2294032 intergenic not near genes chr2L 2296668 intergenic not near genes chr2L 2299303 intergenic not near genes chr2L_16_2295001 chr2L_2295001 RAL-373_125b 70 chr2L 2302003 2302069 chr2L 2302135 2302191 20 128 35.5 40.0 37.8 0.5 188 chr2L 2302003 intergenic not near genes chr2L 2302097 intergenic not near genes chr2L 2302191 intergenic not near genes chr2L_20_2300001 chr2L_2300001 RAL-373_125b 71 chr2L 2303484 2303526 chr2L 2303592 2303640 16 125 20.5 19.0 19.8 0.8 156 chr2L 2303484 intergenic not near genes chr2L 2303562 intergenic not near genes chr2L 2303640 intergenic not near genes chr2L_16_2300001 chr2L_2300001 RAL-373_125b 72 chr2L 2311022 2311088 chr2L 2311166 2311234 11 146 26.5 29.5 28.0 0.4 212 chr2L 2311022 intron CG9967 - chr2L 2311128 intron CG9967 - chr2L 2311234 intron CG9967 - chr2L_11_2310001 chr2L_2310001 RAL-373_125b 73 chr2L 2316422 2316500 chr2L 2316562 2316607 8 119 20.5 23.0 21.8 0.4 185 chr2L 2316422 intron,intron CG9967 -,eys + chr2L 2316514 intron,intron CG9967 -,eys + chr2L 2316607 intron,intron CG9967 -,eys + chr2L_8_2315001 chr2L_2315001 RAL-373_125b 74 chr2L 2317075 2317088 chr2L 2317296 2317304 5 219 57.5 53.5 55.5 0.1 229 chr2L 2317075 intron,intron CG9967 -,eys + chr2L 2317190 intron,intron CG9967 -,eys + chr2L 2317304 intron,intron CG9967 -,eys + chr2L_5_2315001 chr2L_2315001 RAL-373_125b 75 chr2L 2426950 2426974 chr2L 2427056 2427090 7 115 7.5 8.5 8.0 0.8 140 chr2L 2426950 intergenic CR44912 - chr2L 2427020 intergenic CR44912 - chr2L 2427090 3` UTR CR44912 - chr2L_7_2425001 chr2L_2425001 RAL-373_125b 76 chr2L 2427327 2427380 chr2L 2427463 2427516 9 134 9.0 0.0 4.5 1.6 189 chr2L 2427327 3` UTR CR44912 - chr2L 2427422 3` UTR CR44912 - chr2L 2427516 3` UTR CR44912 - chr2L_9_2425001 chr2L_2425001 RAL-373_125b 77 chr2L 2453271 2453279 chr2L 2453403 2453411 4 137 10.0 4.5 7.2 0.5 140 chr2L 2453271 intron dpp + chr2L 2453341 intron dpp + chr2L 2453411 intron dpp + chr2L_4_2450001 chr2L_2450001 RAL-373_125b 78 chr2L 2453281 2453316 chr2L 2453388 2453436 10 129 4.5 4.5 4.5 1.8 155 chr2L 2453281 intron dpp + chr2L 2453358 intron dpp + chr2L 2453436 intron dpp + chr2L_10_2450001 chr2L_2450001 RAL-373_125b 79 chr2L 2480948 2481020 chr2L 2481164 2481235 12 214 3.5 5.5 4.5 2.2 287 chr2L 2480948 intergenic not near genes chr2L 2481092 intergenic not near genes chr2L 2481235 intergenic not near genes chr2L_12_2480001 chr2L_2480001 RAL-373_125b 80 chr2L 2504212 2504222 chr2L 2504327 2504345 7 124 4.0 12.0 8.0 0.8 133 chr2L 2504212 intergenic not near genes chr2L 2504278 intergenic not near genes chr2L 2504345 intergenic not near genes chr2L_7_2500001 chr2L_2500001 RAL-373_125b 81 chr2L 2565504 2565563 chr2L 2571627 2571686 297 16 6121 4.0 6.0 5.0 2.7 6182 chr2L 2565504 exon Cyp309a2 - chr2L 2568595 intron Cyp309a2 - chr2L 2571686 exon Cyp309a2 - chr2L_16_2565001 chr2L_2565001 RAL-373_125b 82 chr2L 2617989 2618062 chr2L 2618118 2618176 21 121 4.0 1.0 2.5 6.0 187 chr2L 2617989 intergenic not near genes chr2L 2618082 intergenic not near genes chr2L 2618176 intergenic not near genes chr2L_21_2615001 chr2L_2615001 RAL-373_125b 83 chr2L 2620571 2620651 chr2L 2620725 2620801 13 151 3.0 3.5 3.2 3.1 230 chr2L 2620571 3` UTR CG43403 + chr2L 2620686 3` UTR CG43403 + chr2L 2620801 intergenic CG43403 + chr2L_13_2620001 chr2L_2620001 RAL-373_125b 84 chr2L 2661157 2661198 chr2L 2663034 2663079 I-element 10 1877 5.0 5.0 5.0 1.7 1922 chr2L 2661157 intergenic not near genes chr2L 2662118 intergenic not near genes chr2L 2663079 intergenic not near genes chr2L_10_2660001 chr2L_2660001 RAL-373_125b 85 chr2L 2661200 2661230 chr2L 2663031 2663067 I-element 9 1854 1.5 4.0 2.8 2.4 1867 chr2L 2661200 intergenic not near genes chr2L 2662134 intergenic not near genes chr2L 2663067 intergenic not near genes chr2L_9_2660001 chr2L_2660001 RAL-373_125b 86 chr2L 2664202 2664228 chr2L 2664328 2664328 4 115 13.0 4.5 8.8 0.4 126 chr2L 2664202 intergenic not near genes chr2L 2664265 intergenic not near genes chr2L 2664328 intergenic not near genes chr2L_4_2660001 chr2L_2660001 RAL-373_125b 87 chr2L 2664231 2664250 chr2L 2664327 2664374 5 116 11.0 4.5 7.8 0.6 143 chr2L 2664231 intergenic not near genes chr2L 2664302 intergenic not near genes chr2L 2664374 intergenic not near genes chr2L_5_2660001 chr2L_2660001 RAL-373_125b 88 chr2L 2698841 2698885 chr2L 2698973 2699022 11 131 0.0 7.5 3.8 2.3 181 chr2L 2698841 intron CG31690 + chr2L 2698932 intron CG31690 + chr2L 2699022 intron CG31690 + chr2L_11_2695001 chr2L_2695001 RAL-373_125b 89 chr2L 2702211 2702274 chr2L 2702415 2702479 12 200 5.0 3.5 4.2 2.3 268 chr2L 2702211 intron CG31690 + chr2L 2702345 intron CG31690 + chr2L 2702479 intron CG31690 + chr2L_12_2700001 chr2L_2700001 RAL-373_125b 90 chr2L 2715639 2715697 chr2L 2715765 2715823 15 123 5.0 5.5 5.2 2.4 184 chr2L 2715639 intron CG31690 + chr2L 2715731 intron CG31690 + chr2L 2715823 intron CG31690 + chr2L_15_2715001 chr2L_2715001 RAL-373_125b 91 chr2L 2725129 2725163 chr2L 2725258 2725293 10 128 5.0 7.5 6.2 1.4 164 chr2L 2725129 intergenic not near genes chr2L 2725211 intergenic CG31689 + chr2L 2725293 intergenic CG31689 + chr2L_10_2725001 chr2L_2725001 RAL-373_125b 92 chr2L 2772579 2772612 chr2L 2779211 2779244 297 4 6625 5.5 13.0 9.2 0.4 6665 chr2L 2772579 3` UTR Syt1 - chr2L 2775912 intron Syt1 - chr2L 2779244 3` UTR Syt1 - chr2L_4_2775001 chr2L_2775001 RAL-373_125b 93 chr2L 2800559 2800615 chr2L 2800692 2800753 11 135 7.0 0.0 3.5 2.4 194 chr2L 2800559 intergenic not near genes chr2L 2800656 intergenic not near genes chr2L 2800753 intergenic not near genes chr2L_11_2800001 chr2L_2800001 RAL-373_125b 94 chr2L 2831032 2831092 chr2L 2831188 2831247 4 156 2.0 2.0 2.0 1.3 215 chr2L 2831032 intergenic not near genes chr2L 2831140 intergenic not near genes chr2L 2831247 intergenic not near genes chr2L_4_2830001 chr2L_2830001 RAL-373_125b 95 chr2L 2863367 2863662 chr2L 2863500 2863792 13 135 11.0 4.5 7.8 1.5 425 chr2L 2863367 intron CG2991 + chr2L 2863580 intron CG2991 + chr2L 2863792 intron CG2991 + chr2L_13_2860001 chr2L_2860001 RAL-373_125b 96 chr2L 2863674 2863712 chr2L 2863805 2863844 8 131 4.0 12.0 8.0 0.9 170 chr2L 2863674 intron CG2991 + chr2L 2863759 intron CG2991 + chr2L 2863844 intron CG2991 + chr2L_8_2860001 chr2L_2860001 RAL-373_125b 97 chr2L 2868563 2868614 chr2L 2868678 2868735 7 122 2.5 7.0 4.8 1.2 172 chr2L 2868563 intergenic CG2991 +,CG31694 - chr2L 2868649 3` UTR CG31694 - chr2L 2868735 3` UTR CG31694 - chr2L_7_2865001 chr2L_2865001 RAL-373_125b 98 chr2L 2885323 2885390 chr2L 2885450 2885517 22 127 2.5 2.5 2.5 6.3 194 chr2L 2885323 intron NTPase - chr2L 2885420 intron NTPase - chr2L 2885517 intron NTPase - chr2L_22_2885001 chr2L_2885001 RAL-373_125b 99 chr2L 2923024 2923099 chr2L 2923144 2923203 16 120 4.0 3.5 3.8 3.3 179 chr2L 2923024 intron lilli + chr2L 2923114 intron lilli + chr2L 2923203 intron lilli + chr2L_16_2920001 chr2L_2920001 RAL-373_125b 100 chr2L 2923843 2923857 chr2L 2924060 2924074 6 216 0.0 17.5 8.8 0.6 231 chr2L 2923843 intron lilli + chr2L 2923958 intron lilli + chr2L 2924074 intron lilli + chr2L_6_2920001 chr2L_2920001 RAL-373_125b 101 chr2L 2926480 2926523 chr2L 2926638 2926681 14 157 4.5 6.5 5.5 2.2 201 chr2L 2926480 intron lilli + chr2L 2926580 intron lilli + chr2L 2926681 intron lilli + chr2L_14_2925001 chr2L_2925001 RAL-373_125b 102 chr2L 2927925 2927961 chr2L 2928042 2928072 7 125 9.0 4.0 6.5 0.9 147 chr2L 2927925 intron lilli + chr2L 2927998 intron lilli + chr2L 2928072 intron lilli + chr2L_7_2925001 chr2L_2925001 RAL-373_125b 103 chr2L 2933262 2933322 chr2L 2935478 2935519 pogo 22 2216 7.5 7.5 7.5 2.6 2257 chr2L 2933262 intron lilli + chr2L 2934390 intron lilli + chr2L 2935519 intron lilli + chr2L_22_2930001 chr2L_2930001 RAL-373_125b 104 chr2L 2937370 2937424 chr2L 2937496 2937532 23 124 8.0 6.0 7.0 2.9 162 chr2L 2937370 intron lilli + chr2L 2937451 intron lilli + chr2L 2937532 intron lilli + chr2L_23_2935001 chr2L_2935001 RAL-373_125b 105 chr2L 3049196 3049253 chr2L 3049332 3049379 18 135 9.5 6.5 8.0 2.0 183 chr2L 3049196 intron v(2)k05816 + chr2L 3049288 intron v(2)k05816 + chr2L 3049379 intron v(2)k05816 + chr2L_18_3045001 chr2L_3045001 RAL-373_125b 106 chr2L 3072984 3073059 chr2L 3078237 3078312 copia 24 5252 5.5 8.0 6.8 3.1 5328 chr2L 3072984 intron toc - chr2L 3075648 intron toc - chr2L 3078312 intron toc - chr2L_24_3075001 chr2L_3075001 RAL-373_125b 107 chr2L 3108839 3108854 chr2L 3108950 3108955 5 116 8.0 6.0 7.0 0.6 116 chr2L 3108839 exon toc - chr2L 3108897 intron toc - chr2L 3108955 intron toc - chr2L_5_3105001 chr2L_3105001 RAL-373_125b 108 chr2L 3108872 3108898 chr2L 3108942 3109025 6 117 5.0 5.0 5.0 1.0 153 chr2L 3108872 intron toc - chr2L 3108948 intron toc - chr2L 3109025 intron toc - chr2L_6_3105001 chr2L_3105001 RAL-373_125b 109 chr2L 3134906 3134916 chr2L 3135033 3135043 4 127 13.0 5.5 9.2 0.4 137 chr2L 3134906 intron toc - chr2L 3134974 intron toc - chr2L 3135043 intron toc - chr2L_4_3130001 chr2L_3130001 RAL-373_125b 110 chr2L 3134917 3134955 chr2L 3135028 3135082 9 121 7.5 5.0 6.2 1.2 165 chr2L 3134917 intron toc - chr2L 3135000 intron toc - chr2L 3135082 intron toc - chr2L_9_3130001 chr2L_3130001 RAL-373_125b 111 chr2L 3147232 3147237 chr2L 3147359 3147364 4 127 23.5 6.5 15.0 0.2 132 chr2L 3147232 3` UTR Mad - chr2L 3147298 3` UTR Mad - chr2L 3147364 3` UTR Mad - chr2L_4_3145001 chr2L_3145001 RAL-373_125b 112 chr2L 3147249 3147300 chr2L 3147353 3147427 20 118 11.5 10.5 11.0 1.7 178 chr2L 3147249 3` UTR Mad - chr2L 3147338 3` UTR Mad - chr2L 3147427 exon Mad - chr2L_20_3145001 chr2L_3145001 RAL-373_125b 113 chr2L 3152448 3152522 chr2L 3152584 3152628 10 132 5.0 6.0 5.5 1.5 180 chr2L 3152448 intron Mad - chr2L 3152538 intron Mad - chr2L 3152628 intron Mad - chr2L_10_3150001 chr2L_3150001 RAL-373_125b 114 chr2L 3191393 3191419 chr2L 3191538 3191565 4 144 12.5 8.0 10.2 0.4 172 chr2L 3191393 intron CG34393 - chr2L 3191479 intron CG34393 - chr2L 3191565 intron CG34393 - chr2L_4_3190001 chr2L_3190001 RAL-373_125b 115 chr2L 3191423 3191462 chr2L 3191536 3191608 10 131 3.0 7.5 5.2 1.6 185 chr2L 3191423 intron CG34393 - chr2L 3191516 intron CG34393 - chr2L 3191608 intron CG34393 - chr2L_10_3190001 chr2L_3190001 RAL-373_125b 116 chr2L 3193790 3193853 chr2L 3193926 3193987 15 135 7.5 8.5 8.0 1.7 197 chr2L 3193790 intron CG34393 - chr2L 3193888 intron CG34393 - chr2L 3193987 intron CG34393 - chr2L_15_3190001 chr2L_3190001 RAL-373_125b 117 chr2L 3202707 3202762 chr2L 3210176 3210240 mdg1 18 7475 7.5 4.0 5.8 2.6 7533 chr2L 3202707 intergenic not near genes chr2L 3206474 intergenic not near genes chr2L 3210240 intergenic CR45336 + chr2L_18_3205001 chr2L_3205001 RAL-373_125b 118 chr2L 3221466 3221527 chr2L 3221724 3221787 15 261 2.5 5.5 4.0 3.0 321 chr2L 3221466 intergenic not near genes chr2L 3221626 intergenic not near genes chr2L 3221787 intergenic not near genes chr2L_15_3220001 chr2L_3220001 RAL-373_125b 119 chr2L 3251465 3251514 chr2L 3259080 3259128 springer 10 7614 3.5 5.0 4.2 1.9 7663 chr2L 3251465 intergenic not near genes chr2L 3255296 intergenic not near genes chr2L 3259128 intergenic not near genes chr2L_10_3255001 chr2L_3255001 RAL-373_125b 120 chr2L 3291223 3291260 chr2L 3291319 3291390 7 121 4.5 7.5 6.0 1.0 167 chr2L 3291223 intergenic CG9664 - chr2L 3291306 3` UTR CG9664 - chr2L 3291390 3` UTR CG9664 - chr2L_7_3290001 chr2L_3290001 RAL-373_125b 121 chr2L 3386185 3386266 chr2L 3386343 3386418 19 151 6.5 5.5 6.0 2.7 233 chr2L 3386185 intergenic not near genes chr2L 3386302 intergenic not near genes chr2L 3386418 intergenic CR45301 - chr2L_19_3385001 chr2L_3385001 RAL-373_125b 122 chr2L 3388560 3388627 chr2L 3388851 3388913 pogo 12 290 5.5 8.0 6.8 1.5 353 chr2L 3388560 intergenic CG42460 - chr2L 3388736 intergenic CG42460 - chr2L 3388913 intergenic CG42460 -,CR44791 + chr2L_12_3385001 chr2L_3385001 RAL-373_125b 123 chr2L 3438521 3438578 chr2L 3438651 3438710 17 128 7.5 5.0 6.2 2.4 189 chr2L 3438521 intergenic not near genes chr2L 3438616 intergenic not near genes chr2L 3438710 intergenic not near genes chr2L_17_3435001 chr2L_3435001 RAL-373_125b 124 chr2L 3471071 3471150 chr2L 3471244 3471308 23 165 4.5 9.5 7.0 2.9 237 chr2L 3471071 exon CG31776 + chr2L 3471190 exon CG31776 + chr2L 3471308 exon CG31776 + chr2L_23_3470001 chr2L_3470001 RAL-373_125b 125 chr2L 3477445 3477462 chr2L 3477585 3477602 4 139 0.0 5.5 2.8 1.1 157 chr2L 3477445 5` UTR CR43928 + chr2L 3477524 5` UTR CR43928 + chr2L 3477602 5` UTR CR43928 + chr2L_4_3475001 chr2L_3475001 RAL-373_125b 126 chr2L 3508311 3508372 chr2L 3508439 3508500 12 123 10.5 11.0 10.8 1.0 189 chr2L 3508311 intergenic tim -,CR45299 + chr2L 3508406 intergenic CR45299 +,tim - chr2L 3508500 intergenic CR45299 +,tim - chr2L_12_3505001 chr2L_3505001 RAL-373_125b 127 chr2L 3522993 3522993 chr2L 3523149 3523156 4 161 17.0 7.0 12.0 0.3 163 chr2L 3522993 exon Sr-CIV - chr2L 3523074 exon Sr-CIV - chr2L 3523156 exon Sr-CIV - chr2L_4_3520001 chr2L_3520001 RAL-373_125b 128 chr2L 3523002 3523038 chr2L 3523145 3523200 14 152 8.5 6.5 7.5 1.6 198 chr2L 3523002 exon Sr-CIV - chr2L 3523101 intron Sr-CIV - chr2L 3523200 exon Sr-CIV - chr2L_14_3520001 chr2L_3520001 RAL-373_125b 129 chr2L 3582833 3582884 chr2L 3582955 3583001 6 124 0.5 4.0 2.2 1.9 168 chr2L 3582833 intergenic not near genes chr2L 3582917 intergenic not near genes chr2L 3583001 intergenic not near genes chr2L_6_3580001 chr2L_3580001 RAL-373_125b 130 chr2L 3603304 3603360 chr2L 3603412 3603487 23 120 8.0 4.0 6.0 3.3 183 chr2L 3603304 intergenic not near genes chr2L 3603396 intergenic not near genes chr2L 3603487 intergenic not near genes chr2L_23_3600001 chr2L_3600001 RAL-373_125b 131 chr2L 3649748 3649809 chr2L 3654996 3655062 copia 25 5249 5.0 6.5 5.8 3.7 5314 chr2L 3649748 intron for - chr2L 3652405 intron for - chr2L 3655062 intron for - chr2L_25_3650001 chr2L_3650001 RAL-373_125b 132 chr2L 3784767 3784872 chr2L 3785666 3785800 8 906 0.0 5.5 2.8 2.1 1033 chr2L 3784767 intergenic CG31960 + chr2L 3785284 exon CG31960 + chr2L 3785800 5` UTR CG31958 + chr2L_8_3785001 chr2L_3785001 RAL-373_125b 133 chr2L 3784700 3784742 chr2L 3785601 3785628 8 894 17.0 11.0 14.0 0.5 928 chr2L 3784700 intergenic CG31960 + chr2L 3785164 exon CG31960 + chr2L 3785628 intergenic CG31960 +,CG31958 + chr2L_8_3785001 chr2L_3785001 RAL-373_125b 134 chr2L 3784765 3784776 chr2L 3786382 3786383 4 1612 12.0 19.0 15.5 0.2 1618 chr2L 3784765 intergenic CG31960 + chr2L 3785574 3` UTR CG31960 + chr2L 3786383 intergenic CG31958 + chr2L_4_3785001 chr2L_3785001 RAL-373_125b 135 chr2L 3787599 3787661 chr2L 3787739 3787790 7 130 7.5 1.0 4.2 1.3 191 chr2L 3787599 intron CG3921 + chr2L 3787694 intron CG3921 + chr2L 3787790 intron CG3921 + chr2L_7_3785001 chr2L_3785001 RAL-373_125b 136 chr2L 3858685 3858723 chr2L 3858846 3858875 7 158 15.0 7.5 11.2 0.6 190 chr2L 3858685 intergenic not near genes chr2L 3858780 intergenic not near genes chr2L 3858875 intergenic not near genes chr2L_7_3855001 chr2L_3855001 RAL-373_125b 137 chr2L 3939228 3939284 chr2L 3939333 3939370 20 110 7.0 7.5 7.2 2.4 142 chr2L 3939228 intron fred - chr2L 3939299 intron fred - chr2L 3939370 intron fred - chr2L_20_3935001 chr2L_3935001 RAL-373_125b 138 chr2L 3943752 3943818 chr2L 3943893 3943959 16 141 2.5 2.0 2.2 5.0 207 chr2L 3943752 intron fred - chr2L 3943856 intron fred - chr2L 3943959 intron fred - chr2L_16_3940001 chr2L_3940001 RAL-373_125b 139 chr2L 3952070 3952112 chr2L 3952172 3952241 13 125 6.0 6.0 6.0 1.9 171 chr2L 3952070 intron fred - chr2L 3952156 intron fred - chr2L 3952241 intron fred - chr2L_13_3950001 chr2L_3950001 RAL-373_125b 140 chr2L 4017268 4017330 chr2L 4017397 4017465 19 133 2.5 5.5 4.0 3.8 197 chr2L 4017268 intergenic not near genes chr2L 4017366 intergenic not near genes chr2L 4017465 intergenic not near genes chr2L_19_4015001 chr2L_4015001 RAL-373_125b 141 chr2L 4027659 4027674 chr2L 4027785 4027795 6 120 3.5 5.5 4.5 1.1 136 chr2L 4027659 intergenic not near genes chr2L 4027727 intergenic not near genes chr2L 4027795 intergenic not near genes chr2L_6_4025001 chr2L_4025001 RAL-373_125b 142 chr2L 4027683 4027696 chr2L 4027794 4027812 4 113 1.0 6.0 3.5 0.9 129 chr2L 4027683 intergenic not near genes chr2L 4027748 intergenic not near genes chr2L 4027812 intergenic not near genes chr2L_4_4025001 chr2L_4025001 RAL-373_125b 143 chr2L 4037756 4037808 chr2L 4037893 4037945 15 136 3.5 3.0 3.2 3.6 189 chr2L 4037756 intron ed + chr2L 4037850 intron ed + chr2L 4037945 intron ed + chr2L_15_4035001 chr2L_4035001 RAL-373_125b 144 chr2L 4049894 4049925 chr2L 4050021 4050045 6 126 5.0 0.0 2.5 1.7 151 chr2L 4049894 intron ed + chr2L 4049970 intron ed + chr2L 4050045 intron ed + chr2L_6_4045001 chr2L_4045001 RAL-373_125b 145 chr2L 4049934 4050043 chr2L 4050746 4050803 9 797 0.0 4.0 2.0 3.0 869 chr2L 4049934 intron ed + chr2L 4050368 intron ed + chr2L 4050803 intron ed + chr2L_9_4050001 chr2L_4050001 RAL-373_125b 146 chr2L 4066003 4066018 chr2L 4068877 4068893 Juan 4 2875 15.0 7.0 11.0 0.3 2890 chr2L 4066003 intron ed + chr2L 4067448 intron ed + chr2L 4068893 intron ed + chr2L_4_4065001 chr2L_4065001 RAL-373_125b 147 chr2L 4066019 4066050 chr2L 4068873 4068925 Juan 8 2871 9.0 6.5 7.8 0.9 2906 chr2L 4066019 intron ed + chr2L 4067472 intron ed + chr2L 4068925 intron ed + chr2L_8_4065001 chr2L_4065001 RAL-373_125b 148 chr2L 4112148 4112192 chr2L 4112540 4112581 10 390 5.5 5.0 5.2 1.6 433 chr2L 4112148 intron ed + chr2L 4112364 intron ed + chr2L 4112581 intron ed + chr2L_10_4110001 chr2L_4110001 RAL-373_125b 149 chr2L 4123882 4123940 chr2L 4124107 4124159 11 227 4.0 2.5 3.2 2.6 277 chr2L 4123882 exon Sr-CI + chr2L 4124020 3` UTR Sr-CI + chr2L 4124159 intergenic Sr-CI + chr2L_11_4120001 chr2L_4120001 RAL-373_125b 150 chr2L 4155543 4155629 chr2L 4155851 4155920 13 298 0.5 3.5 2.0 4.3 377 chr2L 4155543 intergenic not near genes chr2L 4155732 intergenic not near genes chr2L 4155920 intergenic not near genes chr2L_13_4155001 chr2L_4155001 RAL-373_125b 151 chr2L 4159437 4159442 chr2L 4159562 4159577 7 131 4.0 5.0 4.5 1.3 140 chr2L 4159437 intergenic not near genes chr2L 4159507 intergenic not near genes chr2L 4159577 intergenic not near genes chr2L_7_4155001 chr2L_4155001 RAL-373_125b 152 chr2L 4159446 4159487 chr2L 4159553 4159609 8 124 2.0 4.0 3.0 2.0 163 chr2L 4159446 intergenic not near genes chr2L 4159528 intergenic not near genes chr2L 4159609 intergenic not near genes chr2L_8_4155001 chr2L_4155001 RAL-373_125b 153 chr2L 4176430 4176436 chr2L 4176563 4176574 5 137 5.0 10.5 7.8 0.6 144 chr2L 4176430 intergenic not near genes chr2L 4176502 intergenic not near genes chr2L 4176574 intergenic not near genes chr2L_5_4175001 chr2L_4175001 RAL-373_125b 154 chr2L 4184491 4184567 chr2L 4184632 4184706 8 140 2.0 2.0 2.0 2.7 215 chr2L 4184491 intergenic not near genes chr2L 4184598 intergenic not near genes chr2L 4184706 intergenic not near genes chr2L_8_4180001 chr2L_4180001 RAL-373_125b 155 chr2L 4192957 4193018 chr2L 4193076 4193124 17 121 6.0 7.5 6.8 2.2 167 chr2L 4192957 intron CG3714 - chr2L 4193040 intron CG3714 - chr2L 4193124 intron CG3714 - chr2L_17_4190001 chr2L_4190001 RAL-373_125b 156 chr2L 4279957 4280016 chr2L 4280387 4280446 11 427 4.5 7.5 6.0 1.6 489 chr2L 4279957 intron Art2 - chr2L 4280202 intron Art2 - chr2L 4280446 intron Art2 - chr2L_11_4280001 chr2L_4280001 RAL-373_125b 157 chr2L 4309757 4309762 chr2L 4309881 4309897 5 133 9.5 5.5 7.5 0.6 140 chr2L 4309757 intron tutl + chr2L 4309827 intron tutl + chr2L 4309897 intron tutl + chr2L_5_4305001 chr2L_4305001 RAL-373_125b 158 chr2L 4309763 4309814 chr2L 4309878 4309944 16 128 3.5 4.5 4.0 3.2 181 chr2L 4309763 intron tutl + chr2L 4309854 intron tutl + chr2L 4309944 intron tutl + chr2L_16_4305001 chr2L_4305001 RAL-373_125b 159 chr2L 4325633 4325637 chr2L 4325760 4325764 4 127 2.5 1.0 1.8 1.4 131 chr2L 4325633 intron CG16857 + chr2L 4325698 intron CG16857 + chr2L 4325764 intron CG16857 + chr2L_4_4325001 chr2L_4325001 RAL-373_125b 160 chr2L 4351422 4351497 chr2L 4351548 4351635 23 130 5.5 1.0 3.2 5.5 213 chr2L 4351422 5` UTR CR44700 + chr2L 4351528 intergenic CR44700 + chr2L 4351635 intergenic CR44700 + chr2L_23_4350001 chr2L_4350001 RAL-373_125b 161 chr2L 4432478 4432543 chr2L 4432604 4432667 15 125 3.5 5.0 4.2 2.9 189 chr2L 4432478 intron CG15431 - chr2L 4432572 intron CG15431 - chr2L 4432667 intron CG15431 - chr2L_15_4430001 chr2L_4430001 RAL-373_125b 162 chr2L 4435040 4435042 chr2L 4435176 4435178 4 136 0.0 1.5 0.8 2.2 138 chr2L 4435040 intron,3` UTR,3` UTR CG15431 -,CG34177 +,CG34178 + chr2L 4435109 intron CG15431 - chr2L 4435178 intron CG15431 - chr2L_4_4435001 chr2L_4435001 RAL-373_125b 163 chr2L 4601667 4601733 chr2L 4609146 4609214 mdg1 23 7487 9.0 5.0 7.0 2.9 7547 chr2L 4601667 intron dp - chr2L 4605440 intron dp - chr2L 4609214 intron dp - chr2L_23_4605001 chr2L_4605001 RAL-373_125b 164 chr2L 4661427 4661508 chr2L 4661558 4661617 9 120 6.0 4.5 5.2 1.5 190 chr2L 4661427 intergenic not near genes chr2L 4661522 intergenic not near genes chr2L 4661617 intergenic not near genes chr2L_9_4660001 chr2L_4660001 RAL-373_125b 165 chr2L 4661794 4661851 chr2L 4669423 4669474 opus 8 7627 3.5 8.0 5.8 1.2 7680 chr2L 4661794 intergenic not near genes chr2L 4665634 intergenic not near genes chr2L 4669474 intergenic not near genes chr2L_8_4665001 chr2L_4665001 RAL-373_125b 166 chr2L 4698784 4698844 chr2L 4699273 4699343 6 487 34.5 22.0 28.2 0.2 559 chr2L 4698784 intron CG34351 + chr2L 4699064 intron CG34351 + chr2L 4699343 intron CG34351 + chr2L_6_4695001 chr2L_4695001 RAL-373_125b 167 chr2L 4740180 4740224 chr2L 4740328 4740360 11 146 5.0 5.5 5.2 1.8 180 chr2L 4740180 intron CG15630 - chr2L 4740270 intron CG15630 - chr2L 4740360 intron CG15630 - chr2L_11_4740001 chr2L_4740001 RAL-373_125b 168 chr2L 4793280 4793307 chr2L 4793612 4793652 5 342 5.5 5.0 5.2 0.8 372 chr2L 4793280 intron CG15630 - chr2L 4793466 intron CG15630 - chr2L 4793652 exon CG15630 - chr2L_5_4790001 chr2L_4790001 RAL-373_125b 169 chr2L 4793313 4793322 chr2L 4793604 4793667 7 336 3.5 3.5 3.5 1.6 354 chr2L 4793313 intron CG15630 - chr2L 4793490 intron CG15630 - chr2L 4793667 exon CG15630 - chr2L_7_4790001 chr2L_4790001 RAL-373_125b 170 chr2L 4819462 4819519 chr2L 4819615 4819692 14 167 2.5 5.0 3.8 2.9 230 chr2L 4819462 intergenic not near genes chr2L 4819577 intergenic not near genes chr2L 4819692 intergenic not near genes chr2L_14_4815001 chr2L_4815001 RAL-373_125b 171 chr2L 4841043 4841094 chr2L 4841148 4841220 16 118 8.0 9.5 8.8 1.6 177 chr2L 4841043 intron CG12194 + chr2L 4841132 intron CG12194 + chr2L 4841220 3` UTR CG12194 + chr2L_16_4840001 chr2L_4840001 RAL-373_125b 172 chr2L 4862245 4862266 chr2L 4862371 4862392 6 125 13.5 6.5 10.0 0.5 147 chr2L 4862245 intron pog + chr2L 4862318 intron pog + chr2L 4862392 intron pog + chr2L_6_4860001 chr2L_4860001 RAL-373_125b 173 chr2L 4862268 4862300 chr2L 4862368 4862425 10 121 6.0 6.5 6.2 1.4 157 chr2L 4862268 intron pog + chr2L 4862346 intron pog + chr2L 4862425 intron pog + chr2L_10_4860001 chr2L_4860001 RAL-373_125b 174 chr2L 4879133 4879176 chr2L 4880374 4880409 11 1260 21.5 30.5 26.0 0.4 1276 chr2L 4879133 exon Cf2 - chr2L 4879771 intron Cf2 - chr2L 4880409 exon Cf2 - chr2L_11_4875001 chr2L_4875001 RAL-373_125b 175 chr2L 4880379 4880450 chr2L 4881219 4881284 9 822 25.0 28.0 26.5 0.3 905 chr2L 4880379 exon Cf2 - chr2L 4880832 intron Cf2 - chr2L 4881284 exon Cf2 - chr2L_9_4880001 chr2L_4880001 RAL-373_125b 176 chr2L 4892887 4892896 chr2L 4893020 4893029 5 133 1.5 4.0 2.8 1.3 142 chr2L 4892887 intron CG3036 + chr2L 4892958 intron CG3036 + chr2L 4893029 intron CG3036 + chr2L_5_4890001 chr2L_4890001 RAL-373_125b 177 chr2L 4918119 4918202 chr2L 4923242 4923363 jockey 11 5157 3.0 0.0 1.5 4.4 5244 chr2L 4918119 intron hoe1 - chr2L 4920741 intron hoe1 - chr2L 4923363 intron hoe1 - chr2L_11_4920001 chr2L_4920001 RAL-373_125b 178 chr2L 4925653 4925696 chr2L 4925782 4925825 7 127 3.5 10.5 7.0 0.9 172 chr2L 4925653 intron hoe1 - chr2L 4925739 intron hoe1 - chr2L 4925825 intron hoe1 - chr2L_7_4925001 chr2L_4925001 RAL-373_125b 179 chr2L 4926899 4926937 chr2L 4927005 4927067 11 128 1.0 5.5 3.2 2.6 168 chr2L 4926899 intron hoe1 - chr2L 4926983 intron hoe1 - chr2L 4927067 intron hoe1 - chr2L_11_4925001 chr2L_4925001 RAL-373_125b 180 chr2L 5025085 5025157 chr2L 5025211 5025283 13 119 5.5 2.5 4.0 2.6 198 chr2L 5025085 intron vkg - chr2L 5025184 intron vkg - chr2L 5025283 intron vkg - chr2L_13_5025001 chr2L_5025001 RAL-373_125b 181 chr2L 5092363 5092438 chr2L 5092500 5092575 17 136 5.5 5.0 5.2 2.7 212 chr2L 5092363 intron pgant5 - chr2L 5092469 intron pgant5 - chr2L 5092575 intron pgant5 - chr2L_17_5090001 chr2L_5090001 RAL-373_125b 182 chr2L 5262491 5262543 chr2L 5262603 5262654 17 119 8.0 8.0 8.0 1.9 163 chr2L 5262491 intron tkv - chr2L 5262572 intron tkv - chr2L 5262654 intron tkv - chr2L_17_5260001 chr2L_5260001 RAL-373_125b 183 chr2L 5263681 5263740 chr2L 5263807 5263866 13 127 1.0 7.5 4.2 2.5 185 chr2L 5263681 intron tkv - chr2L 5263774 intron tkv - chr2L 5263866 intron tkv - chr2L_13_5260001 chr2L_5260001 RAL-373_125b 184 chr2L 5342738 5342788 chr2L 5345163 5345212 Doc 10 2425 6.0 4.5 5.2 1.6 2474 chr2L 5342738 intergenic not near genes chr2L 5343975 intergenic not near genes chr2L 5345212 intergenic not near genes chr2L_10_5340001 chr2L_5340001 RAL-373_125b 185 chr2L 5403134 5403150 chr2L 5403277 5403292 5 143 6.5 0.0 3.2 1.2 158 chr2L 5403134 intergenic not near genes chr2L 5403213 intergenic not near genes chr2L 5403292 intergenic not near genes chr2L_5_5400001 chr2L_5400001 RAL-373_125b 186 chr2L 5433812 5433832 chr2L 5433936 5433962 4 124 14.0 8.0 11.0 0.3 150 chr2L 5433812 3` UTR CR43715 - chr2L 5433887 3` UTR CR43715 - chr2L 5433962 3` UTR CR43715 - chr2L_4_5430001 chr2L_5430001 RAL-373_125b 187 chr2L 5433838 5433879 chr2L 5433928 5434009 11 126 6.0 7.0 6.5 1.5 171 chr2L 5433838 3` UTR CR43715 - chr2L 5433924 3` UTR CR43715 - chr2L 5434009 3` UTR CR43715 - chr2L_11_5430001 chr2L_5430001 RAL-373_125b 188 chr2L 5436495 5436505 chr2L 5436617 5436627 5 124 11.0 12.5 11.8 0.4 132 chr2L 5436495 3` UTR CR31647 - chr2L 5436561 3` UTR CR31647 - chr2L 5436627 3` UTR CR31647 - chr2L_5_5435001 chr2L_5435001 RAL-373_125b 189 chr2L 5436509 5436538 chr2L 5436615 5436663 10 119 9.5 12.0 10.8 0.8 154 chr2L 5436509 3` UTR CR31647 - chr2L 5436586 3` UTR CR31647 - chr2L 5436663 3` UTR CR31647 - chr2L_10_5435001 chr2L_5435001 RAL-373_125b 190 chr2L 5449654 5449669 chr2L 5449804 5449819 6 149 12.0 0.0 6.0 0.9 165 chr2L 5449654 intergenic not near genes chr2L 5449736 intergenic not near genes chr2L 5449819 intergenic not near genes chr2L_6_5445001 chr2L_5445001 RAL-373_125b 191 chr2L 5475108 5475124 chr2L 5475263 5475269 6 152 8.5 6.5 7.5 0.7 161 chr2L 5475108 intergenic not near genes chr2L 5475188 intergenic not near genes chr2L 5475269 intergenic not near genes chr2L_6_5475001 chr2L_5475001 RAL-373_125b 192 chr2L 5475125 5475159 chr2L 5475262 5475307 12 152 4.0 6.0 5.0 2.0 182 chr2L 5475125 intergenic not near genes chr2L 5475216 intergenic not near genes chr2L 5475307 intergenic not near genes chr2L_12_5475001 chr2L_5475001 RAL-373_125b 193 chr2L 5508487 5508554 chr2L 5508607 5508671 17 125 3.5 6.0 4.8 2.9 184 chr2L 5508487 intergenic not near genes chr2L 5508579 intergenic not near genes chr2L 5508671 intergenic not near genes chr2L_17_5505001 chr2L_5505001 RAL-373_125b 194 chr2L 5573643 5573695 chr2L 5573764 5573821 7 121 4.0 7.0 5.5 1.1 178 chr2L 5573643 intergenic not near genes chr2L 5573732 intergenic not near genes chr2L 5573821 intergenic not near genes chr2L_7_5570001 chr2L_5570001 RAL-373_125b 195 chr2L 5615138 5615192 chr2L 5615267 5615315 20 127 12.5 5.5 9.0 2.0 177 chr2L 5615138 intron CG14010 - chr2L 5615226 intron CG14010 - chr2L 5615315 intron,5` UTR CG14010 -,CR44795 + chr2L_20_5615001 chr2L_5615001 RAL-373_125b 196 chr2L 5647493 5647545 chr2L 5647649 5647696 10 154 3.0 5.5 4.2 1.9 203 chr2L 5647493 intron CG31646 - chr2L 5647594 intron CG31646 - chr2L 5647696 intron CG31646 - chr2L_10_5645001 chr2L_5645001 RAL-373_125b 197 chr2L 5691787 5691842 chr2L 5691936 5691991 8 150 6.0 0.0 3.0 2.0 204 chr2L 5691787 intergenic CR44819 +,CR44820 - chr2L 5691889 intergenic CR44819 +,CR44820 - chr2L 5691991 intergenic CR44819 + chr2L_8_5690001 chr2L_5690001 RAL-373_125b 198 chr2L 5695811 5695878 chr2L 5695953 5696020 14 139 6.0 2.0 4.0 2.8 209 chr2L 5695811 intergenic not near genes chr2L 5695916 intergenic not near genes chr2L 5696020 intergenic not near genes chr2L_14_5695001 chr2L_5695001 RAL-373_125b 199 chr2L 5805157 5805184 chr2L 5805309 5805336 8 150 10.5 3.5 7.0 1.0 179 chr2L 5805157 intergenic CG11034 + chr2L 5805246 intergenic CG11034 + chr2L 5805336 intergenic CG11034 + chr2L_8_5805001 chr2L_5805001 RAL-373_125b 200 chr2L 5805197 5805228 chr2L 5805306 5805380 9 140 3.5 3.0 3.2 2.1 183 chr2L 5805197 intergenic CG11034 + chr2L 5805288 intergenic CG11034 + chr2L 5805380 intergenic CG11034 + chr2L_9_5805001 chr2L_5805001 RAL-373_125b 201 chr2L 5806210 5806225 chr2L 5806363 5806373 5 151 8.5 9.0 8.8 0.5 163 chr2L 5806210 intron CG11034 + chr2L 5806292 intron CG11034 + chr2L 5806373 intron CG11034 + chr2L_5_5805001 chr2L_5805001 RAL-373_125b 202 chr2L 5819630 5819702 chr2L 5819764 5819831 15 131 5.5 6.5 6.0 2.1 201 chr2L 5819630 intergenic not near genes chr2L 5819730 intergenic not near genes chr2L 5819831 intergenic not near genes chr2L_15_5815001 chr2L_5815001 RAL-373_125b 203 chr2L 5827679 5827735 chr2L 5836736 5836793 roo 16 9054 7.0 7.0 7.0 2.0 9114 chr2L 5827679 intron TrissinR + chr2L 5832236 intron TrissinR + chr2L 5836793 intron TrissinR + chr2L_16_5830001 chr2L_5830001 RAL-373_125b 204 chr2L 5837308 5837389 chr2L 5837784 5837789 16 460 3.5 7.0 5.2 2.6 481 chr2L 5837308 intron TrissinR + chr2L 5837548 intron TrissinR + chr2L 5837789 intron TrissinR + chr2L_16_5835001 chr2L_5835001 RAL-373_125b 205 chr2L 5863346 5863414 chr2L 5863681 5863740 12 330 8.5 9.0 8.8 1.2 394 chr2L 5863346 intron rau - chr2L 5863543 intron rau - chr2L 5863740 intron rau - chr2L_12_5860001 chr2L_5860001 RAL-373_125b 206 chr2L 5897554 5897618 chr2L 5897687 5897750 25 127 6.5 8.0 7.2 3.0 196 chr2L 5897554 intergenic not near genes chr2L 5897652 intergenic not near genes chr2L 5897750 intergenic not near genes chr2L_25_5895001 chr2L_5895001 RAL-373_125b 207 chr2L 5922901 5922909 chr2L 5923030 5923038 4 128 8.0 13.5 10.8 0.3 137 chr2L 5922901 3` UTR CG9016 - chr2L 5922970 3` UTR CG9016 - chr2L 5923038 3` UTR CG9016 - chr2L_4_5920001 chr2L_5920001 RAL-373_125b 208 chr2L 5926283 5926582 chr2L 5926454 5926711 23 143 5.5 0.0 2.8 6.1 428 chr2L 5926283 intron dsf + chr2L 5926497 intron dsf + chr2L 5926711 intron dsf + chr2L_23_5925001 chr2L_5925001 RAL-373_125b 209 chr2L 6002401 6002463 chr2L 6002537 6002578 18 133 3.0 7.0 5.0 3.0 177 chr2L 6002401 3` UTR Tsp26A + chr2L 6002490 3` UTR Tsp26A + chr2L 6002578 3` UTR Tsp26A + chr2L_18_6000001 chr2L_6000001 RAL-373_125b 210 chr2L 6007044 6007068 chr2L 6007170 6007194 5 125 8.5 2.5 5.5 0.8 150 chr2L 6007044 intergenic Gal -,CG9098 - chr2L 6007119 intergenic CG9098 -,Gal - chr2L 6007194 intergenic CG9098 -,Gal - chr2L_5_6005001 chr2L_6005001 RAL-373_125b 211 chr2L 6021476 6021554 chr2L 6021697 6021709 6 206 6.5 0.0 3.2 1.4 233 chr2L 6021476 exon CG13996 + chr2L 6021592 exon CG13996 + chr2L 6021709 3` UTR CG13996 + chr2L_6_6020001 chr2L_6020001 RAL-373_125b 212 chr2L 6050393 6050453 chr2L 6050547 6050607 14 152 10.0 2.0 6.0 2.0 214 chr2L 6050393 3` UTR CG12393 + chr2L 6050500 intergenic CG12393 +,CG9135 + chr2L 6050607 intergenic CG12393 +,CG9135 + chr2L_14_6050001 chr2L_6050001 RAL-373_125b 213 chr2L 6086704 6086768 chr2L 6086835 6086877 25 132 2.5 5.0 3.8 5.2 173 chr2L 6086704 intron Kr-h1 + chr2L 6086790 intron Kr-h1 + chr2L 6086877 intron Kr-h1 + chr2L_25_6085001 chr2L_6085001 RAL-373_125b 214 chr2L 6136502 6136576 chr2L 6136649 6136723 16 146 4.0 3.0 3.5 3.6 221 chr2L 6136502 intergenic not near genes chr2L 6136612 intergenic not near genes chr2L 6136723 intergenic not near genes chr2L_16_6135001 chr2L_6135001 RAL-373_125b 215 chr2L 6146648 6146663 chr2L 6146754 6146768 4 111 7.0 8.0 7.5 0.5 120 chr2L 6146648 intergenic not near genes chr2L 6146708 intergenic not near genes chr2L 6146768 intergenic not near genes chr2L_4_6145001 chr2L_6145001 RAL-373_125b 216 chr2L 6182038 6182109 chr2L 6182172 6182227 25 128 8.0 3.0 5.5 3.8 189 chr2L 6182038 intron CG34380 + chr2L 6182132 intron CG34380 + chr2L 6182227 intron CG34380 + chr2L_25_6180001 chr2L_6180001 RAL-373_125b 217 chr2L 6185409 6185471 chr2L 6185520 6185582 15 116 5.5 7.5 6.5 2.0 173 chr2L 6185409 intron CG34380 + chr2L 6185496 intron CG34380 + chr2L 6185582 intron CG34380 + chr2L_15_6185001 chr2L_6185001 RAL-373_125b 218 chr2L 6209565 6209635 chr2L 6209686 6209756 15 123 9.0 6.0 7.5 1.8 191 chr2L 6209565 3` UTR CG34380 + chr2L 6209660 3` UTR CG34380 + chr2L 6209756 3` UTR CG34380 + chr2L_15_6205001 chr2L_6205001 RAL-373_125b 219 chr2L 6253574 6253635 chr2L 6253700 6253756 10 122 4.0 3.0 3.5 2.2 182 chr2L 6253574 intron Ddr + chr2L 6253665 intron Ddr + chr2L 6253756 intron Ddr + chr2L_10_6250001 chr2L_6250001 RAL-373_125b 220 chr2L 6283916 6283940 chr2L 6284055 6284080 5 149 5.5 0.0 2.8 1.3 164 chr2L 6283916 intron Ddr + chr2L 6283998 intron Ddr + chr2L 6284080 intron Ddr + chr2L_5_6280001 chr2L_6280001 RAL-373_125b 221 chr2L 6300511 6300580 chr2L 6300647 6300716 17 132 5.5 6.0 5.8 2.5 205 chr2L 6300511 intron Ddr + chr2L 6300614 intron Ddr + chr2L 6300716 intron Ddr + chr2L_17_6300001 chr2L_6300001 RAL-373_125b 222 chr2L 6308265 6308321 chr2L 6308398 6308454 18 131 8.0 8.5 8.2 2.0 189 chr2L 6308265 intron Ddr + chr2L 6308360 intron Ddr + chr2L 6308454 intron,3` UTR Ddr +,CG43922 - chr2L_18_6305001 chr2L_6305001 RAL-373_125b 223 chr2L 6349027 6349071 chr2L 6349155 6349199 14 128 4.5 2.5 3.5 3.1 172 chr2L 6349027 intergenic CG9498 - chr2L 6349113 intergenic CG9498 - chr2L 6349199 intergenic CG9498 - chr2L_14_6345001 chr2L_6345001 RAL-373_125b 224 chr2L 6363112 6363159 chr2L 6366082 6366131 Burdock 16 2967 5.5 6.0 5.8 2.4 3019 chr2L 6363112 intergenic not near genes chr2L 6364622 intergenic not near genes chr2L 6366131 intergenic not near genes chr2L_16_6360001 chr2L_6360001 RAL-373_125b 225 chr2L 6426817 6426881 chr2L 6445127 6445184 roo 10 18303 5.0 6.0 5.5 1.5 18367 chr2L 6426817 3` UTR CG9527 - chr2L 6436000 intron CG9527 - chr2L 6445184 exon CG9527 - chr2L_10_6435001 chr2L_6435001 RAL-373_125b 226 chr2L 6499919 6499994 chr2L 6500067 6500137 22 144 6.0 6.5 6.2 3.1 218 chr2L 6499919 intron CG31637 + chr2L 6500028 intron CG31637 + chr2L 6500137 intron CG31637 + chr2L_22_6500001 chr2L_6500001 RAL-373_125b 227 chr2L 6544343 6544367 chr2L 6544476 6544509 4 138 0.0 4.5 2.2 1.2 166 chr2L 6544343 intron eya - chr2L 6544426 intron eya - chr2L 6544509 intron eya - chr2L_4_6540001 chr2L_6540001 RAL-373_125b 228 chr2L 6590076 6590123 chr2L 6590173 6590250 6 119 8.0 2.0 5.0 1.0 174 chr2L 6590076 intron CG11319 - chr2L 6590163 intron CG11319 - chr2L 6590250 intron CG11319 - chr2L_6_6590001 chr2L_6590001 RAL-373_125b 229 chr2L 6740684 6740747 chr2L 6740821 6740884 10 134 1.0 10.0 5.5 1.5 200 chr2L 6740684 intergenic TTLL3A - chr2L 6740784 intergenic not near genes chr2L 6740884 intergenic not near genes chr2L_10_6740001 chr2L_6740001 RAL-373_125b 230 chr2L 6836460 6836527 chr2L 6836592 6836658 16 131 9.0 6.0 7.5 1.9 198 chr2L 6836460 intron sens-2 + chr2L 6836559 intron sens-2 + chr2L 6836658 intron sens-2 + chr2L_16_6835001 chr2L_6835001 RAL-373_125b 231 chr2L 6850333 6850380 chr2L 6850466 6850513 10 131 8.0 3.0 5.5 1.5 180 chr2L 6850333 intergenic not near genes chr2L 6850423 intergenic not near genes chr2L 6850513 intergenic not near genes chr2L_10_6850001 chr2L_6850001 RAL-373_125b 232 chr2L 6867733 6867763 chr2L 6867873 6867903 11 140 10.5 10.5 10.5 1.0 170 chr2L 6867733 intron Nha1 - chr2L 6867818 intron Nha1 - chr2L 6867903 intron Nha1 - chr2L_11_6865001 chr2L_6865001 RAL-373_125b 233 chr2L 6876771 6876803 chr2L 6882966 6883034 diver 10 6222 8.0 6.0 7.0 1.2 6263 chr2L 6876771 intron Nlg2 + chr2L 6879902 intron Nlg2 + chr2L 6883034 intron Nlg2 + chr2L_10_6875001 chr2L_6875001 RAL-373_125b 234 chr2L 6991378 6991436 chr2L 6998549 6998595 HMS-Beagle 6 7173 0.0 6.5 3.2 1.4 7217 chr2L 6991378 intron uif - chr2L 6994986 intron uif - chr2L 6998595 intron uif - chr2L_6_6990001 chr2L_6990001 RAL-373_125b 235 chr2L 7005187 7005252 chr2L 7005333 7005398 11 146 7.0 4.0 5.5 1.7 211 chr2L 7005187 intron uif - chr2L 7005292 intron uif - chr2L 7005398 intron uif - chr2L_11_7005001 chr2L_7005001 RAL-373_125b 236 chr2L 7088842 7088898 chr2L 7089082 7089147 4 248 0.0 1.5 0.8 2.2 305 chr2L 7088842 intergenic not near genes chr2L 7088994 intergenic not near genes chr2L 7089147 intergenic not near genes chr2L_4_7085001 chr2L_7085001 RAL-373_125b 237 chr2L 7089592 7089639 chr2L 7089727 7089769 12 132 0.0 9.0 4.5 2.2 177 chr2L 7089592 intergenic not near genes chr2L 7089680 intergenic not near genes chr2L 7089769 intergenic not near genes chr2L_12_7085001 chr2L_7085001 RAL-373_125b 238 chr2L 7106909 7106969 chr2L 7107118 7107177 4 209 3.0 6.0 4.5 0.7 268 chr2L 7106909 intron Pvf3 - chr2L 7107043 intron Pvf3 - chr2L 7107177 exon Pvf3 - chr2L_4_7105001 chr2L_7105001 RAL-373_125b 239 chr2L 7111728 7111789 chr2L 7111864 7111925 10 135 2.0 0.0 1.0 5.0 197 chr2L 7111728 intron Pvf3 - chr2L 7111826 intron Pvf3 - chr2L 7111925 intron Pvf3 - chr2L_10_7110001 chr2L_7110001 RAL-373_125b 240 chr2L 7125763 7125810 chr2L 7125923 7125976 8 165 5.5 8.0 6.8 1.0 213 chr2L 7125763 intron Pvf3 - chr2L 7125870 intron Pvf3 - chr2L 7125976 intron Pvf3 - chr2L_8_7125001 chr2L_7125001 RAL-373_125b 241 chr2L 7130383 7130441 chr2L 7130521 7130578 9 134 4.0 3.0 3.5 2.0 195 chr2L 7130383 intron Pvf3 - chr2L 7130480 intron Pvf3 - chr2L 7130578 intron Pvf3 - chr2L_9_7130001 chr2L_7130001 RAL-373_125b 242 chr2L 7165753 7165812 chr2L 7165883 7165936 8 128 1.5 5.5 3.5 1.8 183 chr2L 7165753 intergenic not near genes chr2L 7165844 intergenic not near genes chr2L 7165936 intergenic not near genes chr2L_8_7165001 chr2L_7165001 RAL-373_125b 243 chr2L 7179617 7179693 chr2L 7179797 7179827 21 171 3.0 7.0 5.0 3.5 210 chr2L 7179617 intergenic not near genes chr2L 7179722 intergenic not near genes chr2L 7179827 intergenic not near genes chr2L_21_7175001 chr2L_7175001 RAL-373_125b 244 chr2L 7218353 7218428 chr2L 7218483 7218556 16 126 5.0 5.0 5.0 2.7 203 chr2L 7218353 intron CG13784 - chr2L 7218454 intron CG13784 - chr2L 7218556 intron CG13784 - chr2L_16_7215001 chr2L_7215001 RAL-373_125b 245 chr2L 7268406 7268462 chr2L 7268536 7268592 8 130 0.0 6.0 3.0 2.0 186 chr2L 7268406 intron Wnt4 - chr2L 7268499 intron Wnt4 - chr2L 7268592 intron Wnt4 - chr2L_8_7265001 chr2L_7265001 RAL-373_125b 246 chr2L 7284565 7284631 chr2L 7284697 7284767 5 136 4.5 5.0 4.8 0.9 202 chr2L 7284565 intergenic not near genes chr2L 7284666 intergenic not near genes chr2L 7284767 intergenic not near genes chr2L_5_7280001 chr2L_7280001 RAL-373_125b 247 chr2L 7335166 7335229 chr2L 7335312 7335376 11 146 4.5 5.5 5.0 1.8 210 chr2L 7335166 intron Wnt6 + chr2L 7335271 intron Wnt6 + chr2L 7335376 intron Wnt6 + chr2L_11_7335001 chr2L_7335001 RAL-373_125b 248 chr2L 7336970 7337026 chr2L 7337080 7337146 24 118 2.0 5.5 3.8 5.0 176 chr2L 7336970 intron Wnt6 + chr2L 7337058 intron Wnt6 + chr2L 7337146 intron Wnt6 + chr2L_24_7335001 chr2L_7335001 RAL-373_125b 249 chr2L 7342471 7342505 chr2L 7351852 7351868 roo 4 9378 25.5 29.0 27.2 0.1 9397 chr2L 7342471 intron Wnt6 + chr2L 7347170 intron Wnt6 + chr2L 7351868 exon Wnt6 + chr2L_4_7345001 chr2L_7345001 RAL-373_125b 250 chr2L 7342506 7342540 chr2L 7351851 7351929 roo 16 9372 21.5 28.5 25.0 0.6 9423 chr2L 7342506 intron Wnt6 + chr2L 7347218 intron Wnt6 + chr2L 7351929 exon Wnt6 + chr2L_16_7345001 chr2L_7345001 RAL-373_125b 251 chr2L 7343299 7343357 chr2L 7350448 7350491 roo 15 7153 6.5 5.5 6.0 2.1 7192 chr2L 7343299 intron Wnt6 + chr2L 7346895 intron Wnt6 + chr2L 7350491 intron Wnt6 + chr2L_15_7345001 chr2L_7345001 RAL-373_125b 252 chr2L 7342381 7342411 chr2L 7352530 7352559 roo 5 10150 27.5 33.0 30.2 0.2 10178 chr2L 7342381 intron Wnt6 + chr2L 7347470 intron Wnt6 + chr2L 7352559 intergenic Wnt6 + chr2L_5_7345001 chr2L_7345001 RAL-373_125b 253 chr2L 7342377 7342454 chr2L 7352561 7352602 roo 7 10155 28.5 29.5 29.0 0.2 10225 chr2L 7342377 intron Wnt6 + chr2L 7347490 intron Wnt6 + chr2L 7352602 intergenic Wnt6 + chr2L_7_7345001 chr2L_7345001 RAL-373_125b 254 chr2L 7363490 7363538 chr2L 7363608 7363660 10 126 5.0 0.5 2.8 2.6 170 chr2L 7363490 5` UTR Wnt10 + chr2L 7363575 5` UTR Wnt10 + chr2L 7363660 5` UTR Wnt10 + chr2L_10_7360001 chr2L_7360001 RAL-373_125b 255 chr2L 7369692 7369743 chr2L 7369865 7369914 11 172 7.5 4.0 5.8 1.6 222 chr2L 7369692 intron,3` UTR Wnt10 +,CR44063 - chr2L 7369803 intron,3` UTR Wnt10 +,CR44063 - chr2L 7369914 intron,intron Wnt10 +,CR44063 - chr2L_11_7365001 chr2L_7365001 RAL-373_125b 256 chr2L 7555689 7555757 chr2L 7555823 7555886 18 132 3.5 6.0 4.8 3.1 197 chr2L 7555689 intron RapGAP1 - chr2L 7555788 intron RapGAP1 - chr2L 7555886 intron RapGAP1 - chr2L_18_7555001 chr2L_7555001 RAL-373_125b 257 chr2L 7567474 7567533 chr2L 7567607 7567672 8 129 4.0 5.0 4.5 1.5 198 chr2L 7567474 intron RapGAP1 - chr2L 7567573 intron RapGAP1 - chr2L 7567672 intron RapGAP1 - chr2L_8_7565001 chr2L_7565001 RAL-373_125b 258 chr2L 7579151 7579224 chr2L 7579392 7579454 BS 10 237 1.0 0.0 0.5 6.7 303 chr2L 7579151 intergenic RapGAP1 - chr2L 7579302 intergenic RapGAP1 - chr2L 7579454 intergenic RapGAP1 - chr2L_10_7575001 chr2L_7575001 RAL-373_125b 259 chr2L 7585461 7585506 chr2L 7585610 7585655 11 145 6.0 2.5 4.2 2.1 194 chr2L 7585461 intergenic not near genes chr2L 7585558 intergenic not near genes chr2L 7585655 intergenic not near genes chr2L_11_7585001 chr2L_7585001 RAL-373_125b 260 chr2L 7640370 7640412 chr2L 7640501 7640523 10 123 7.5 4.0 5.8 1.5 153 chr2L 7640370 intergenic not near genes chr2L 7640446 intergenic not near genes chr2L 7640523 intergenic not near genes chr2L_10_7640001 chr2L_7640001 RAL-373_125b 261 chr2L 7664574 7664638 chr2L 7664973 7665031 18 396 6.0 4.0 5.0 3.0 457 chr2L 7664574 intron Slob - chr2L 7664802 intron Slob - chr2L 7665031 intron Slob - chr2L_18_7660001 chr2L_7660001 RAL-373_125b 262 chr2L 7715463 7715534 chr2L 7715649 7715725 17 188 6.0 3.5 4.8 2.9 262 chr2L 7715463 exon CG33296 - chr2L 7715594 exon CG33296 - chr2L 7715725 intron CG33296 - chr2L_17_7715001 chr2L_7715001 RAL-373_125b 263 chr2L 7867539 7867593 chr2L 7867668 7867737 9 139 5.5 4.0 4.8 1.6 198 chr2L 7867539 intron Proc - chr2L 7867638 intron Proc - chr2L 7867737 intron Proc - chr2L_9_7865001 chr2L_7865001 RAL-373_125b 264 chr2L 7922715 7922760 chr2L 7922826 7922891 15 125 5.5 5.0 5.2 2.4 176 chr2L 7922715 intron Snoo - chr2L 7922803 intron Snoo - chr2L 7922891 intron Snoo - chr2L_15_7920001 chr2L_7920001 RAL-373_125b 265 chr2L 7941182 7941194 chr2L 7941289 7941318 4 119 9.5 9.0 9.2 0.4 136 chr2L 7941182 intron Snoo - chr2L 7941250 intron Snoo - chr2L 7941318 intron Snoo - chr2L_4_7940001 chr2L_7940001 RAL-373_125b 266 chr2L 7959000 7959068 chr2L 7960461 7960514 pogo 12 1459 7.5 3.0 5.2 1.9 1514 chr2L 7959000 intron Snoo - chr2L 7959757 intron Snoo - chr2L 7960514 intron Snoo - chr2L_12_7955001 chr2L_7955001 RAL-373_125b 267 chr2L 7977051 7977110 chr2L 7984068 7984123 297 14 7018 2.0 2.5 2.2 4.4 7072 chr2L 7977051 intron Snoo - chr2L 7980587 intron Snoo - chr2L 7984123 intron,5` UTR Snoo -,CG7231 + chr2L_14_7980001 chr2L_7980001 RAL-373_125b 268 chr2L 7994930 7994991 chr2L 7997550 7997616 22 2623 37.5 38.5 38.0 0.6 2686 chr2L 7994930 3` UTR,5` UTR CG7227 -,CR44996 + chr2L 7996273 exon,5` UTR CG7227 -,CR44996 + chr2L 7997616 5` UTR CG7227 - chr2L_22_7995001 chr2L_7995001 RAL-373_125b 269 chr2L 7994754 7994792 chr2L 7998157 7998222 16 3403 16.0 41.0 28.5 0.5 3468 chr2L 7994754 3` UTR CG7227 - chr2L 7996488 exon,5` UTR CG7227 -,CR44996 + chr2L 7998222 intergenic not near genes chr2L_16_7995001 chr2L_7995001 RAL-373_125b 270 chr2L 8003033 8003043 chr2L 8003165 8003174 4 131 5.0 6.0 5.5 0.6 141 chr2L 8003033 intron Wwox - chr2L 8003104 intron Wwox - chr2L 8003174 intron Wwox - chr2L_4_8000001 chr2L_8000001 RAL-373_125b 271 chr2L 8013618 8013634 chr2L 8023603 8023619 copia 5 9985 7.0 6.0 6.5 0.7 10001 chr2L 8013618 intron Tg + chr2L 8018618 intron Tg + chr2L 8023619 intron Tg + chr2L_5_8015001 chr2L_8015001 RAL-373_125b 272 chr2L 8018817 8018836 chr2L 8023651 8023665 Doc 5 4833 0.0 12.0 6.0 0.7 4848 chr2L 8018817 intron Tg + chr2L 8021241 intron Tg + chr2L 8023665 intron Tg + chr2L_5_8020001 chr2L_8020001 RAL-373_125b 273 chr2L 8034557 8034585 chr2L 8034708 8034715 5 145 10.5 9.5 10.0 0.5 158 chr2L 8034557 intron,intron CG7367 -,Cka + chr2L 8034636 intron,intron CG7367 -,Cka + chr2L 8034715 intron,intron CG7367 -,Cka + chr2L_5_8030001 chr2L_8030001 RAL-373_125b 274 chr2L 8044067 8044123 chr2L 8044186 8044252 10 125 3.0 8.0 5.5 1.5 185 chr2L 8044067 exon CG7466 + chr2L 8044160 intron CG7466 + chr2L 8044252 intron CG7466 + chr2L_10_8040001 chr2L_8040001 RAL-373_125b 275 chr2L 8167118 8167148 chr2L 8167259 8167289 7 139 10.0 10.5 10.2 0.6 171 chr2L 8167118 intron Piezo + chr2L 8167204 intron Piezo + chr2L 8167289 intron Piezo + chr2L_7_8165001 chr2L_8165001 RAL-373_125b 276 chr2L 8167155 8167169 chr2L 8167246 8167310 5 131 6.0 9.0 7.5 0.6 155 chr2L 8167155 intron Piezo + chr2L 8167232 intron Piezo + chr2L 8167310 intron Piezo + chr2L_5_8165001 chr2L_8165001 RAL-373_125b 277 chr2L 8171275 8171291 chr2L 8171406 8171422 5 131 0.0 13.0 6.5 0.7 147 chr2L 8171275 intron Piezo + chr2L 8171348 intron Piezo + chr2L 8171422 intron Piezo + chr2L_5_8170001 chr2L_8170001 RAL-373_125b 278 chr2L 8184879 8184946 chr2L 8185020 8185087 22 137 8.0 7.5 7.8 2.5 208 chr2L 8184879 intron Piezo + chr2L 8184983 intron Piezo + chr2L 8185087 intron Piezo + chr2L_22_8180001 chr2L_8180001 RAL-373_125b 279 chr2L 8237314 8237335 chr2L 8237701 8237723 4 392 1.0 8.5 4.8 0.7 409 chr2L 8237314 intron Pvr - chr2L 8237518 intron Pvr - chr2L 8237723 intron Pvr - chr2L_4_8235001 chr2L_8235001 RAL-373_125b 280 chr2L 8271582 8271650 chr2L 8271703 8271776 8 125 2.5 5.5 4.0 1.6 194 chr2L 8271582 intron Btk29A - chr2L 8271679 intron Btk29A - chr2L 8271776 intron Btk29A - chr2L_8_8270001 chr2L_8270001 RAL-373_125b 281 chr2L 8286254 8286323 chr2L 8286391 8286460 18 133 8.0 11.0 9.5 1.7 206 chr2L 8286254 intron Btk29A - chr2L 8286357 intron Btk29A - chr2L 8286460 intron Btk29A - chr2L_18_8285001 chr2L_8285001 RAL-373_125b 282 chr2L 8349575 8349631 chr2L 8349720 8349756 13 143 2.5 2.5 2.5 3.7 181 chr2L 8349575 exon CG7778 + chr2L 8349666 intron CG7778 + chr2L 8349756 exon CG7778 + chr2L_13_8345001 chr2L_8345001 RAL-373_125b 283 chr2L 8351512 8351583 chr2L 8351639 8351705 4 126 0.0 3.5 1.8 1.4 193 chr2L 8351512 intergenic CG7778 + chr2L 8351608 intergenic CG7778 + chr2L 8351705 intergenic Mur29B + chr2L_4_8350001 chr2L_8350001 RAL-373_125b 284 chr2L 8451804 8451859 chr2L 8451969 8452016 11 163 1.5 5.5 3.5 2.4 212 chr2L 8451804 5` UTR fu12 - chr2L 8451910 intron fu12 - chr2L 8452016 intron fu12 - chr2L_11_8450001 chr2L_8450001 RAL-373_125b 285 chr2L 8452379 8452441 chr2L 8461600 8461662 roo 11 9220 11.5 9.0 10.2 1.0 9283 chr2L 8452379 intron fu12 - chr2L 8457020 intron fu12 - chr2L 8461662 intron fu12 - chr2L_11_8455001 chr2L_8455001 RAL-373_125b 286 chr2L 8481608 8481658 chr2L 8481880 8481935 12 273 3.5 3.0 3.2 2.9 327 chr2L 8481608 intron d + chr2L 8481772 intron d + chr2L 8481935 intron d + chr2L_12_8480001 chr2L_8480001 RAL-373_125b 287 chr2L 8498163 8498229 chr2L 8498294 8498349 13 129 2.5 4.5 3.5 2.9 186 chr2L 8498163 intron Dh31 - chr2L 8498256 intron Dh31 - chr2L 8498349 intron Dh31 - chr2L_13_8495001 chr2L_8495001 RAL-373_125b 288 chr2L 8553419 8553489 chr2L 8553616 8553660 16 192 8.5 4.5 6.5 2.1 241 chr2L 8553419 intron Sema-1a + chr2L 8553540 intron Sema-1a + chr2L 8553660 intron Sema-1a + chr2L_16_8550001 chr2L_8550001 RAL-373_125b 289 chr2L 8594423 8594490 chr2L 8601527 8601554 297 11 7098 4.5 4.5 4.5 2.0 7131 chr2L 8594423 intron,3` UTR Sema-1a +,CR43855 - chr2L 8597988 intron Sema-1a + chr2L 8601554 intron Sema-1a + chr2L_11_8595001 chr2L_8595001 RAL-373_125b 290 chr2L 8687036 8687071 chr2L 8687190 8687221 8 152 6.5 6.5 6.5 1.1 185 chr2L 8687036 3` UTR Trs23 + chr2L 8687128 intergenic Trs23 +,Hnf4 - chr2L 8687221 intergenic Hnf4 -,Trs23 + chr2L_8_8685001 chr2L_8685001 RAL-373_125b 291 chr2L 8698278 8698325 chr2L 8698467 8698514 10 188 11.0 0.0 5.5 1.5 236 chr2L 8698278 intron Hnf4 - chr2L 8698396 intron Hnf4 - chr2L 8698514 intron Hnf4 - chr2L_10_8695001 chr2L_8695001 RAL-373_125b 292 chr2L 8723069 8723141 chr2L 8731496 8731568 Tirant 22 8424 5.0 9.5 7.2 2.7 8499 chr2L 8723069 intron raw - chr2L 8727318 intron raw - chr2L 8731568 intron raw - chr2L_22_8725001 chr2L_8725001 RAL-373_125b 293 chr2L 8736223 8736257 chr2L 8736353 8736387 14 130 0.0 6.0 3.0 3.5 164 chr2L 8736223 intron raw - chr2L 8736305 intron raw - chr2L 8736387 intron raw - chr2L_14_8735001 chr2L_8735001 RAL-373_125b 294 chr2L 8791280 8791300 chr2L 8791400 8791427 5 120 5.0 4.5 4.8 0.9 147 chr2L 8791280 intergenic not near genes chr2L 8791354 intergenic not near genes chr2L 8791427 intergenic not near genes chr2L_5_8790001 chr2L_8790001 RAL-373_125b 295 chr2L 8799754 8799795 chr2L 8799919 8799961 17 160 6.5 4.5 5.5 2.6 207 chr2L 8799754 intergenic not near genes chr2L 8799858 intergenic not near genes chr2L 8799961 intergenic not near genes chr2L_17_8795001 chr2L_8795001 RAL-373_125b 296 chr2L 8799796 8799815 chr2L 8799916 8799973 8 151 4.0 4.5 4.2 1.5 177 chr2L 8799796 intergenic not near genes chr2L 8799884 intergenic not near genes chr2L 8799973 intergenic not near genes chr2L_8_8795001 chr2L_8795001 RAL-373_125b 297 chr2L 8859569 8859635 chr2L 8859699 8859765 16 129 5.0 6.5 5.8 2.4 196 chr2L 8859569 intergenic not near genes chr2L 8859667 intergenic not near genes chr2L 8859765 intergenic not near genes chr2L_16_8855001 chr2L_8855001 RAL-373_125b 298 chr2L 8885873 8885888 chr2L 8886009 8886024 5 136 10.0 10.0 10.0 0.5 151 chr2L 8885873 intergenic not near genes chr2L 8885948 intergenic not near genes chr2L 8886024 intergenic not near genes chr2L_5_8885001 chr2L_8885001 RAL-373_125b 299 chr2L 8902415 8902482 chr2L 8902612 8902679 18 193 4.5 7.0 5.8 2.6 264 chr2L 8902415 intron CG34398 + chr2L 8902547 intron CG34398 + chr2L 8902679 intron CG34398 + chr2L_18_8900001 chr2L_8900001 RAL-373_125b 300 chr2L 8910674 8910728 chr2L 8910815 8910868 10 140 6.5 1.0 3.8 2.1 194 chr2L 8910674 intron CG34398 + chr2L 8910771 intron CG34398 + chr2L 8910868 intron CG34398 + chr2L_10_8910001 chr2L_8910001 RAL-373_125b 301 chr2L 8956185 8956241 chr2L 8956312 8956373 7 130 3.5 0.0 1.8 2.5 188 chr2L 8956185 intron CG31886 - chr2L 8956279 intron CG31886 - chr2L 8956373 intron CG31886 - chr2L_7_8955001 chr2L_8955001 RAL-373_125b 302 chr2L 8976195 8976253 chr2L 8976317 8976370 4 131 0.0 3.0 1.5 1.6 175 chr2L 8976195 intergenic not near genes chr2L 8976282 intergenic not near genes chr2L 8976370 intergenic not near genes chr2L_4_8975001 chr2L_8975001 RAL-373_125b 303 chr2L 8980420 8980476 chr2L 8980554 8980615 8 138 8.0 0.0 4.0 1.6 195 chr2L 8980420 intron CG13101 - chr2L 8980518 intron CG13101 - chr2L 8980615 intron CG13101 - chr2L_8_8980001 chr2L_8980001 RAL-373_125b 304 chr2L 9000235 9000311 chr2L 9007795 9007897 roo 18 7564 7.0 0.5 3.8 3.8 7662 chr2L 9000235 intergenic Try29F + chr2L 9004066 intergenic not near genes chr2L 9007897 intergenic not near genes chr2L_18_9000001 chr2L_9000001 RAL-373_125b 305 chr2L 9023125 9023181 chr2L 9023257 9023312 17 136 10.0 4.5 7.2 2.1 187 chr2L 9023125 intergenic not near genes chr2L 9023218 intergenic not near genes chr2L 9023312 intergenic not near genes chr2L_17_9020001 chr2L_9020001 RAL-373_125b 306 chr2L 9039985 9040045 chr2L 9040122 9040182 14 136 5.5 4.0 4.8 2.4 197 chr2L 9039985 intergenic not near genes chr2L 9040084 intergenic not near genes chr2L 9040182 intergenic not near genes chr2L_14_9040001 chr2L_9040001 RAL-373_125b 307 chr2L 9044053 9044127 chr2L 9044201 9044280 12 148 0.5 4.0 2.2 3.8 227 chr2L 9044053 intergenic not near genes chr2L 9044166 intergenic not near genes chr2L 9044280 intergenic not near genes chr2L_12_9040001 chr2L_9040001 RAL-373_125b 308 chr2L 9053358 9053409 chr2L 9053643 9053684 10 282 5.5 2.0 3.8 2.1 326 chr2L 9053358 exon CG31708 - chr2L 9053521 intron CG31708 - chr2L 9053684 intron CG31708 - chr2L_10_9050001 chr2L_9050001 RAL-373_125b 309 chr2L 9069637 9069646 chr2L 9069778 9069787 4 140 0.0 2.0 1.0 2.0 150 chr2L 9069637 intron CG31708 - chr2L 9069712 intron CG31708 - chr2L 9069787 intron CG31708 - chr2L_4_9065001 chr2L_9065001 RAL-373_125b 310 chr2L 9084337 9084340 chr2L 16217660 16217660 11 7133321 19.5 20.0 19.8 0.5 7133323 chr2L 9084337 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_11_12650001 chr2L_12650001 RAL-373_125b 311 chr2L 9113755 9113801 chr2L 9113910 9113951 7 155 6.5 2.0 4.2 1.3 196 chr2L 9113755 intergenic Or30a + chr2L 9113853 intergenic not near genes chr2L 9113951 intergenic not near genes chr2L_7_9110001 chr2L_9110001 RAL-373_125b 312 chr2L 9115597 9115610 chr2L 9115728 9115730 6 129 5.5 6.0 5.8 0.9 133 chr2L 9115597 intergenic not near genes chr2L 9115664 intergenic not near genes chr2L 9115730 intergenic not near genes chr2L_6_9115001 chr2L_9115001 RAL-373_125b 313 chr2L 9190896 9190958 chr2L 9191035 9191084 5 128 0.0 8.0 4.0 1.0 188 chr2L 9190896 intron tai + chr2L 9190990 intron tai + chr2L 9191084 intron tai + chr2L_5_9190001 chr2L_9190001 RAL-373_125b 314 chr2L 9195826 9195882 chr2L 9195958 9196000 21 128 2.0 9.0 5.5 3.2 174 chr2L 9195826 intron tai + chr2L 9195913 intron tai + chr2L 9196000 intron tai + chr2L_21_9195001 chr2L_9195001 RAL-373_125b 315 chr2L 9217944 9217995 chr2L 9222781 9222840 Doc 13 4839 2.0 1.0 1.5 5.2 4896 chr2L 9217944 intron tai + chr2L 9220392 intron tai + chr2L 9222840 intron tai + chr2L_13_9220001 chr2L_9220001 RAL-373_125b 316 chr2L 9227189 9227238 chr2L 9227312 9227364 8 126 3.5 3.0 3.2 1.9 175 chr2L 9227189 intron tai + chr2L 9227276 intron tai + chr2L 9227364 intron tai + chr2L_8_9225001 chr2L_9225001 RAL-373_125b 317 chr2L 9264308 9264350 chr2L 9264458 9264500 13 148 7.0 9.0 8.0 1.4 192 chr2L 9264308 intron Ggamma30A + chr2L 9264404 intron Ggamma30A + chr2L 9264500 intron Ggamma30A + chr2L_13_9260001 chr2L_9260001 RAL-373_125b 318 chr2L 9279948 9280012 chr2L 9280091 9280156 5 144 5.5 5.0 5.2 0.8 208 chr2L 9279948 intron Ggamma30A + chr2L 9280052 intron Ggamma30A + chr2L 9280156 intron Ggamma30A + chr2L_5_9280001 chr2L_9280001 RAL-373_125b 319 chr2L 9287280 9287351 chr2L 9287427 9287498 11 146 5.0 8.0 6.5 1.5 218 chr2L 9287280 intron Ggamma30A + chr2L 9287389 intron Ggamma30A + chr2L 9287498 intron Ggamma30A + chr2L_11_9285001 chr2L_9285001 RAL-373_125b 320 chr2L 9290731 9290756 chr2L 9290851 9290883 4 122 6.5 0.5 3.5 0.9 152 chr2L 9290731 intron Ggamma30A + chr2L 9290807 intron Ggamma30A + chr2L 9290883 intron Ggamma30A + chr2L_4_9290001 chr2L_9290001 RAL-373_125b 321 chr2L 9297332 9297402 chr2L 9297459 9297529 21 126 4.0 7.0 5.5 3.2 197 chr2L 9297332 3` UTR Ggamma30A + chr2L 9297430 3` UTR Ggamma30A + chr2L 9297529 3` UTR Ggamma30A + chr2L_21_9295001 chr2L_9295001 RAL-373_125b 322 chr2L 9322775 9322833 chr2L 9322890 9322959 22 123 8.5 4.0 6.2 3.1 184 chr2L 9322775 intergenic not near genes chr2L 9322867 intergenic not near genes chr2L 9322959 intergenic not near genes chr2L_22_9320001 chr2L_9320001 RAL-373_125b 323 chr2L 9337875 9337903 chr2L 9337987 9338030 10 124 5.5 3.5 4.5 1.8 155 chr2L 9337875 intron Eaat1 + chr2L 9337952 intron Eaat1 + chr2L 9338030 intron Eaat1 + chr2L_10_9335001 chr2L_9335001 RAL-373_125b 324 chr2L 9347567 9347589 chr2L 9347709 9347731 7 142 0.0 0.0 0.0 7.0 164 chr2L 9347567 intergenic not near genes chr2L 9347649 intergenic not near genes chr2L 9347731 intergenic not near genes chr2L_7_9345001 chr2L_9345001 RAL-373_125b 325 chr2L 9362103 9362153 chr2L 9362231 9362280 17 126 3.0 10.0 6.5 2.3 177 chr2L 9362103 intergenic not near genes chr2L 9362192 intergenic not near genes chr2L 9362280 intergenic not near genes chr2L_17_9360001 chr2L_9360001 RAL-373_125b 326 chr2L 9380195 9380254 chr2L 9380340 9380400 10 143 4.5 4.5 4.5 1.8 205 chr2L 9380195 exon Shawl - chr2L 9380298 intron Shawl - chr2L 9380400 intron Shawl - chr2L_10_9380001 chr2L_9380001 RAL-373_125b 327 chr2L 9387201 9387270 chr2L 9387349 9387418 14 148 5.0 2.0 3.5 3.1 217 chr2L 9387201 intron Shawl - chr2L 9387310 intron Shawl - chr2L 9387418 intron,5` UTR Shawl -,Aldh + chr2L_14_9385001 chr2L_9385001 RAL-373_125b 328 chr2L 9393457 9393522 chr2L 9396474 9396528 jockey 15 3015 4.5 5.0 4.8 2.6 3071 chr2L 9393457 intron Shawl - chr2L 9394992 intron Shawl - chr2L 9396528 intron Shawl - chr2L_15_9390001 chr2L_9390001 RAL-373_125b 329 chr2L 9407857 9407903 chr2L 9407989 9408029 16 129 4.0 2.5 3.2 3.8 172 chr2L 9407857 intron Shawl - chr2L 9407943 intron Shawl - chr2L 9408029 intron Shawl - chr2L_16_9405001 chr2L_9405001 RAL-373_125b 330 chr2L 9428465 9428512 chr2L 9428594 9428641 6 129 6.5 0.0 3.2 1.4 176 chr2L 9428465 exon CG42847 + chr2L 9428553 3` UTR CG42847 + chr2L 9428641 3` UTR CG42847 + chr2L_6_9425001 chr2L_9425001 RAL-373_125b 331 chr2L 9448899 9448917 chr2L 9449036 9449054 4 137 0.0 9.0 4.5 0.7 155 chr2L 9448899 intron numb + chr2L 9448976 intron numb + chr2L 9449054 intron numb + chr2L_4_9445001 chr2L_9445001 RAL-373_125b 332 chr2L 9450981 9451037 chr2L 9451136 9451192 16 153 8.0 4.5 6.2 2.2 211 chr2L 9450981 intron numb + chr2L 9451086 intron numb + chr2L 9451192 intron numb + chr2L_16_9450001 chr2L_9450001 RAL-373_125b 333 chr2L 9454936 9455004 chr2L 9455083 9455158 18 150 7.5 5.0 6.2 2.5 222 chr2L 9454936 intron numb + chr2L 9455047 intron numb + chr2L 9455158 intron numb + chr2L_18_9455001 chr2L_9455001 RAL-373_125b 334 chr2L 9456887 9456962 chr2L 9457018 9457068 19 127 2.5 5.5 4.0 3.8 181 chr2L 9456887 intron numb + chr2L 9456978 intron numb + chr2L 9457068 intron numb + chr2L_19_9455001 chr2L_9455001 RAL-373_125b 335 chr2L 9460708 9460777 chr2L 9460844 9460923 11 140 4.5 0.0 2.2 3.4 215 chr2L 9460708 exon numb + chr2L 9460816 intron numb + chr2L 9460923 intron numb + chr2L_11_9460001 chr2L_9460001 RAL-373_125b 336 chr2L 9463718 9463760 chr2L 9463853 9463888 11 132 7.5 6.0 6.8 1.4 170 chr2L 9463718 intergenic not near genes chr2L 9463803 intergenic not near genes chr2L 9463888 intergenic not near genes chr2L_11_9460001 chr2L_9460001 RAL-373_125b 337 chr2L 9464832 9464872 chr2L 9464960 9465023 5 145 3.5 0.0 1.8 1.8 191 chr2L 9464832 intergenic not near genes chr2L 9464928 intergenic not near genes chr2L 9465023 intergenic not near genes chr2L_5_9460001 chr2L_9460001 RAL-373_125b 338 chr2L 9487122 9487179 chr2L 9487270 9487337 10 146 5.5 0.0 2.8 2.6 215 chr2L 9487122 intergenic not near genes chr2L 9487230 intergenic not near genes chr2L 9487337 intergenic not near genes chr2L_10_9485001 chr2L_9485001 RAL-373_125b 339 chr2L 9506389 9506458 chr2L 9506589 9506653 24 197 4.5 6.0 5.2 3.9 264 chr2L 9506389 intron CG33298 + chr2L 9506521 intron CG33298 + chr2L 9506653 intron CG33298 + chr2L_24_9505001 chr2L_9505001 RAL-373_125b 340 chr2L 9619454 9619510 chr2L 9619834 9619897 11 385 3.0 3.0 3.0 2.8 443 chr2L 9619454 intron GlcAT-S + chr2L 9619676 intron GlcAT-S + chr2L 9619897 intron GlcAT-S + chr2L_11_9615001 chr2L_9615001 RAL-373_125b 341 chr2L 9695125 9695132 chr2L 9695301 9695307 4 176 17.0 5.5 11.2 0.3 182 chr2L 9695125 intron Pka-C1 - chr2L 9695216 intron Pka-C1 - chr2L 9695307 intron Pka-C1 - chr2L_4_9695001 chr2L_9695001 RAL-373_125b 342 chr2L 9695134 9695187 chr2L 9695300 9695362 16 173 6.0 5.5 5.8 2.4 228 chr2L 9695134 intron Pka-C1 - chr2L 9695248 intron Pka-C1 - chr2L 9695362 intron Pka-C1 - chr2L_16_9695001 chr2L_9695001 RAL-373_125b 343 chr2L 9719742 9719761 chr2L 9719869 9719893 7 129 1.5 2.0 1.8 2.5 151 chr2L 9719742 intron Nckx30C - chr2L 9719818 intron Nckx30C - chr2L 9719893 intron Nckx30C - chr2L_7_9715001 chr2L_9715001 RAL-373_125b 344 chr2L 9734248 9734276 chr2L 9734379 9734402 9 125 6.0 11.0 8.5 0.9 154 chr2L 9734248 intron Nckx30C - chr2L 9734325 intron Nckx30C - chr2L 9734402 intron Nckx30C - chr2L_9_9730001 chr2L_9730001 RAL-373_125b 345 chr2L 9739368 9739419 chr2L 9739508 9739539 9 129 8.5 6.5 7.5 1.1 171 chr2L 9739368 intron Nckx30C - chr2L 9739454 intron Nckx30C - chr2L 9739539 intron Nckx30C - chr2L_9_9735001 chr2L_9735001 RAL-373_125b 346 chr2L 9739432 9739444 chr2L 9739561 9739571 4 129 5.5 13.5 9.5 0.4 139 chr2L 9739432 intron Nckx30C - chr2L 9739502 intron Nckx30C - chr2L 9739571 intron Nckx30C - chr2L_4_9735001 chr2L_9735001 RAL-373_125b 347 chr2L 9770722 9770763 chr2L 9770877 9770916 16 154 5.5 3.0 4.2 3.1 194 chr2L 9770722 intron ppk18 - chr2L 9770819 intron ppk18 - chr2L 9770916 exon ppk18 - chr2L_16_9770001 chr2L_9770001 RAL-373_125b 348 chr2L 9780387 9780416 chr2L 9780627 9780656 9 239 6.5 9.5 8.0 1.0 269 chr2L 9780387 intergenic not near genes chr2L 9780522 intergenic not near genes chr2L 9780656 intergenic not near genes chr2L_9_9780001 chr2L_9780001 RAL-373_125b 349 chr2L 9812805 9812813 chr2L 9812948 9812956 6 142 17.5 9.5 13.5 0.4 151 chr2L 9812805 intron nAChRalpha6 - chr2L 9812880 intron nAChRalpha6 - chr2L 9812956 intron nAChRalpha6 - chr2L_6_9810001 chr2L_9810001 RAL-373_125b 350 chr2L 9837402 9837443 chr2L 9837525 9837571 8 127 3.0 0.5 1.8 2.9 169 chr2L 9837402 intron nAChRalpha6 - chr2L 9837486 intron nAChRalpha6 - chr2L 9837571 intron nAChRalpha6 - chr2L_8_9835001 chr2L_9835001 RAL-373_125b 351 chr2L 9873089 9873160 chr2L 9873410 9873469 30 322 6.0 4.0 5.0 5.0 380 chr2L 9873089 intron nAChRalpha6 - chr2L 9873279 intron nAChRalpha6 - chr2L 9873469 intron nAChRalpha6 - chr2L_30_9870001 chr2L_9870001 RAL-373_125b 352 chr2L 9892457 9892533 chr2L 9892583 9892659 18 124 4.5 4.0 4.2 3.5 202 chr2L 9892457 exon mtDNA-helicase - chr2L 9892558 intron mtDNA-helicase - chr2L 9892659 exon mtDNA-helicase - chr2L_18_9890001 chr2L_9890001 RAL-373_125b 353 chr2L 9973691 9973754 chr2L 9980855 9980923 HMS-Beagle 26 7162 5.5 9.0 7.2 3.2 7232 chr2L 9973691 intergenic not near genes chr2L 9977307 intergenic not near genes chr2L 9980923 intergenic not near genes chr2L_26_9975001 chr2L_9975001 RAL-373_125b 354 chr2L 10051678 10051754 chr2L 10051813 10051869 21 119 7.0 4.5 5.8 3.1 191 chr2L 10051678 5` UTR CR44874 + chr2L 10051774 5` UTR CR44874 + chr2L 10051869 5` UTR CR44874 + chr2L_21_10050001 chr2L_10050001 RAL-373_125b 355 chr2L 10095589 10095655 chr2L 10095719 10095785 19 127 7.0 5.5 6.2 2.6 196 chr2L 10095589 intron CG44153 - chr2L 10095687 intron CG44153 - chr2L 10095785 intron CG44153 - chr2L_19_10095001 chr2L_10095001 RAL-373_125b 356 chr2L 10105272 10105304 chr2L 10105393 10105430 8 120 8.0 10.0 9.0 0.8 158 chr2L 10105272 intron,intron CG44153 -,CG34109 + chr2L 10105351 intron,intron CG44153 -,CG34109 + chr2L 10105430 intron,intron CG44153 -,CG34109 + chr2L_8_10105001 chr2L_10105001 RAL-373_125b 357 chr2L 10138142 10138191 chr2L 10143435 10143481 Rt1c 12 5293 6.5 7.5 7.0 1.5 5339 chr2L 10138142 intron CG44153 - chr2L 10140812 intron CG44153 - chr2L 10143481 intron CG44153 - chr2L_12_10140001 chr2L_10140001 RAL-373_125b 358 chr2L 10156279 10156329 chr2L 10163799 10163826 blood 18 7513 8.0 6.5 7.2 2.2 7547 chr2L 10156279 intron,3` UTR CG44153 -,CG4839 + chr2L 10160052 intron CG44153 - chr2L 10163826 intron CG44153 - chr2L_18_10160001 chr2L_10160001 RAL-373_125b 359 chr2L 10156330 10156351 chr2L 10163798 10163850 blood 6 7501 6.0 6.5 6.2 0.8 7520 chr2L 10156330 intron,3` UTR CG44153 -,CG4839 + chr2L 10160090 intron CG44153 - chr2L 10163850 intron CG44153 - chr2L_6_10160001 chr2L_10160001 RAL-373_125b 360 chr2L 10177858 10177925 chr2L 10177982 10178055 21 129 4.5 8.0 6.2 2.9 197 chr2L 10177858 intron CG44153 - chr2L 10177956 intron CG44153 - chr2L 10178055 5` UTR CG44153 - chr2L_21_10175001 chr2L_10175001 RAL-373_125b 361 chr2L 10184942 10184971 chr2L 10185064 10185081 6 117 7.5 12.0 9.8 0.6 139 chr2L 10184942 exon Sur - chr2L 10185012 exon Sur - chr2L 10185081 exon Sur - chr2L_6_10185001 chr2L_10185001 RAL-373_125b 362 chr2L 10191411 10191486 chr2L 10191544 10191619 11 133 4.0 2.0 3.0 2.8 208 chr2L 10191411 intron,exon Sur -,CG31874 - chr2L 10191515 intron Sur - chr2L 10191619 exon Sur - chr2L_11_10190001 chr2L_10190001 RAL-373_125b 363 chr2L 10209801 10209823 chr2L 10209924 10209944 12 124 11.5 2.5 7.0 1.5 143 chr2L 10209801 intergenic CR44845 +,CG5727 -,CG5731 - chr2L 10209872 3` UTR CG5727 - chr2L 10209944 3` UTR CG5727 - chr2L_12_10205001 chr2L_10205001 RAL-373_125b 364 chr2L 10276150 10276226 chr2L 10276278 10276354 22 127 2.5 3.5 3.0 5.5 204 chr2L 10276150 intron Utx - chr2L 10276252 intron Utx - chr2L 10276354 intron Utx - chr2L_22_10275001 chr2L_10275001 RAL-373_125b 365 chr2L 10277972 10278042 chr2L 10278097 10278172 22 128 0.0 4.5 2.2 6.9 200 chr2L 10277972 intron Utx - chr2L 10278072 intron Utx - chr2L 10278172 intron Utx - chr2L_22_10275001 chr2L_10275001 RAL-373_125b 366 chr2L 10294627 10294690 chr2L 10294763 10294826 6 135 4.5 5.5 5.0 1.0 199 chr2L 10294627 exon Hand - chr2L 10294726 intron Hand - chr2L 10294826 intron Hand - chr2L_6_10290001 chr2L_10290001 RAL-373_125b 367 chr2L 10314457 10314522 chr2L 10314616 10314681 14 159 6.5 3.0 4.8 2.4 224 chr2L 10314457 intergenic CG5384 -,CG4972 + chr2L 10314569 intergenic CG5384 -,CG4972 + chr2L 10314681 intergenic CG4972 +,CG5384 - chr2L_14_10310001 chr2L_10310001 RAL-373_125b 368 chr2L 10442235 10442250 chr2L 10442362 10442377 6 127 4.0 2.0 3.0 1.5 142 chr2L 10442235 intergenic CR45375 -,loh + chr2L 10442306 intergenic CR45375 -,loh + chr2L 10442377 intergenic loh +,CR45375 - chr2L_6_10440001 chr2L_10440001 RAL-373_125b 369 chr2L 10458056 10458087 chr2L 10458367 10458391 8 308 5.0 2.0 3.5 1.8 335 chr2L 10458056 intron LM408 + chr2L 10458224 intron LM408 + chr2L 10458391 intron LM408 + chr2L_8_10455001 chr2L_10455001 RAL-373_125b 370 chr2L 10474343 10474406 chr2L 10474469 10474537 13 123 4.5 4.5 4.5 2.4 194 chr2L 10474343 5` UTR RluA-1 - chr2L 10474440 intergenic RluA-1 - chr2L 10474537 intergenic RluA-1 - chr2L_13_10470001 chr2L_10470001 RAL-373_125b 371 chr2L 10480272 10480318 chr2L 10480394 10480452 6 134 9.0 0.0 4.5 1.1 180 chr2L 10480272 intron RluA-2 + chr2L 10480362 intron RluA-2 + chr2L 10480452 intron RluA-2 + chr2L_6_10480001 chr2L_10480001 RAL-373_125b 372 chr2L 10515333 10515390 chr2L 10515476 10515533 20 142 9.5 4.0 6.8 2.6 200 chr2L 10515333 intron,intron CG45083 -,Fatp - chr2L 10515433 intron,intron CG45083 -,Fatp - chr2L 10515533 intron,intron CG45083 -,Fatp - chr2L_20_10515001 chr2L_10515001 RAL-373_125b 373 chr2L 10519497 10519508 chr2L 10519784 10519789 6 299 0.0 9.5 4.8 1.0 292 chr2L 10519497 intergenic Lrr47 + chr2L 10519643 intergenic Lrr47 + chr2L 10519789 intergenic not near genes chr2L_6_10515001 chr2L_10515001 RAL-373_125b 374 chr2L 10563895 10563941 chr2L 10564003 10564084 8 137 1.0 2.5 1.8 2.9 189 chr2L 10563895 intron Trim9 + chr2L 10563990 intron Trim9 + chr2L 10564084 intron Trim9 + chr2L_8_10560001 chr2L_10560001 RAL-373_125b 375 chr2L 10580748 10580818 chr2L 10580878 10580949 18 126 6.5 3.0 4.8 3.1 201 chr2L 10580748 intron Trim9 + chr2L 10580848 intron Trim9 + chr2L 10580949 intron Trim9 + chr2L_18_10580001 chr2L_10580001 RAL-373_125b 376 chr2L 10589024 10589081 chr2L 10589150 10589207 9 124 2.5 5.0 3.8 1.9 183 chr2L 10589024 intron Trim9 + chr2L 10589116 intron Trim9 + chr2L 10589207 intron Trim9 + chr2L_9_10585001 chr2L_10585001 RAL-373_125b 377 chr2L 10592792 10592868 chr2L 10600502 10600580 opus 11 7710 1.5 6.5 4.0 2.2 7788 chr2L 10592792 intron Trim9 + chr2L 10596686 intron Trim9 + chr2L 10600580 intron Trim9 + chr2L_11_10595001 chr2L_10595001 RAL-373_125b 378 chr2L 10633307 10633382 chr2L 10633438 10633477 12 108 4.5 6.5 5.5 1.8 170 chr2L 10633307 intron CG7329 - chr2L 10633392 intron CG7329 - chr2L 10633477 intron CG7329 - chr2L_12_10630001 chr2L_10630001 RAL-373_125b 379 chr2L 10640600 10640636 chr2L 10640728 10640775 8 136 14.0 3.5 8.8 0.8 175 chr2L 10640600 exon CG31872 + chr2L 10640688 exon CG31872 + chr2L 10640775 exon CG31872 + chr2L_8_10640001 chr2L_10640001 RAL-373_125b 380 chr2L 10640645 10640671 chr2L 10640727 10640791 9 129 7.5 3.5 5.5 1.4 146 chr2L 10640645 exon CG31872 + chr2L 10640718 exon CG31872 + chr2L 10640791 exon CG31872 + chr2L_9_10640001 chr2L_10640001 RAL-373_125b 381 chr2L 10688495 10688570 chr2L 10688621 10688685 6 124 1.5 1.0 1.2 2.7 190 chr2L 10688495 intergenic CG7294 - chr2L 10688590 intergenic CG7294 - chr2L 10688685 intergenic CG7294 - chr2L_6_10685001 chr2L_10685001 RAL-373_125b 382 chr2L 10723364 10723411 chr2L 10723504 10723551 4 143 7.0 0.0 3.5 0.9 187 chr2L 10723364 intergenic not near genes chr2L 10723458 intergenic not near genes chr2L 10723551 intergenic not near genes chr2L_4_10720001 chr2L_10720001 RAL-373_125b 383 chr2L 10756683 10756757 chr2L 10757180 10757254 25 494 3.5 4.5 4.0 5.0 571 chr2L 10756683 intergenic CG17124 - chr2L 10756968 intergenic not near genes chr2L 10757254 intergenic not near genes chr2L_25_10755001 chr2L_10755001 RAL-373_125b 384 chr2L 10787935 10788030 chr2L 10788078 10788151 6 139 1.5 8.5 5.0 1.0 216 chr2L 10787935 intron CG31869 - chr2L 10788043 intron CG31869 - chr2L 10788151 intron CG31869 - chr2L_6_10785001 chr2L_10785001 RAL-373_125b 385 chr2L 10849613 10849642 chr2L 10849937 10849948 4 316 7.0 12.5 9.8 0.4 335 chr2L 10849613 5` UTR porin - chr2L 10849780 5` UTR porin - chr2L 10849948 5` UTR porin - chr2L_4_10845001 chr2L_10845001 RAL-373_125b 386 chr2L 10849649 10849666 chr2L 10849921 10849990 9 310 3.0 9.5 6.2 1.2 341 chr2L 10849649 5` UTR porin - chr2L 10849820 5` UTR porin - chr2L 10849990 5` UTR porin - chr2L_9_10845001 chr2L_10845001 RAL-373_125b 387 chr2L 10850950 10850961 chr2L 10851077 10851093 4 129 7.0 5.5 6.2 0.6 143 chr2L 10850950 intron CG43129 + chr2L 10851022 intron CG43129 + chr2L 10851093 intron CG43129 + chr2L_4_10850001 chr2L_10850001 RAL-373_125b 388 chr2L 10862812 10862866 chr2L 10864466 10864504 Rt1c 14 1648 7.5 4.0 5.8 2.1 1692 chr2L 10862812 3` UTR CR43807 - chr2L 10863658 intron CR43807 - chr2L 10864504 3` UTR CR43807 - chr2L_14_10860001 chr2L_10860001 RAL-373_125b 389 chr2L 10873004 10873061 chr2L 10873135 10873181 25 127 9.0 7.0 8.0 2.8 177 chr2L 10873004 intergenic not near genes chr2L 10873092 intergenic not near genes chr2L 10873181 intergenic not near genes chr2L_25_10870001 chr2L_10870001 RAL-373_125b 390 chr2L 10876528 10876567 chr2L 10883634 10883664 297 4 7101 6.5 4.5 5.5 0.6 7136 chr2L 10876528 intergenic not near genes chr2L 10880096 intergenic not near genes chr2L 10883664 intergenic not near genes chr2L_4_10880001 chr2L_10880001 RAL-373_125b 391 chr2L 10912955 10913002 chr2L 10913084 10913126 12 127 7.0 7.0 7.0 1.5 171 chr2L 10912955 intergenic not near genes chr2L 10913040 intergenic not near genes chr2L 10913126 intergenic not near genes chr2L_12_10910001 chr2L_10910001 RAL-373_125b 392 chr2L 10946940 10946970 chr2L 10956164 10956235 roo 13 9251 5.5 5.0 5.2 2.1 9295 chr2L 10946940 intron dpr2 - chr2L 10951588 intron dpr2 - chr2L 10956235 intron dpr2 - chr2L_13_10950001 chr2L_10950001 RAL-373_125b 393 chr2L 11056526 11056592 chr2L 11056658 11056717 19 131 5.5 5.0 5.2 3.1 191 chr2L 11056526 intron Samuel - chr2L 11056622 intron Samuel - chr2L 11056717 intron Samuel - chr2L_19_11055001 chr2L_11055001 RAL-373_125b 394 chr2L 11174608 11174659 chr2L 11174715 11174765 10 108 4.0 5.5 4.8 1.7 157 chr2L 11174608 intron Ca-beta - chr2L 11174686 intron Ca-beta - chr2L 11174765 intron Ca-beta - chr2L_10_11170001 chr2L_11170001 RAL-373_125b 395 chr2L 11201559 11201601 chr2L 11201682 11201726 6 125 2.5 0.0 1.2 2.7 167 chr2L 11201559 intron Ca-beta - chr2L 11201642 intron Ca-beta - chr2L 11201726 intron Ca-beta - chr2L_6_11200001 chr2L_11200001 RAL-373_125b 396 chr2L 11250654 11250721 chr2L 11250781 11250845 16 122 4.5 3.0 3.8 3.3 191 chr2L 11250654 intron ab + chr2L 11250750 intron ab + chr2L 11250845 intron ab + chr2L_16_11250001 chr2L_11250001 RAL-373_125b 397 chr2L 11315219 11315270 chr2L 11317673 11317707 G2 8 2446 7.0 3.0 5.0 1.3 2488 chr2L 11315219 intergenic not near genes chr2L 11316463 intergenic not near genes chr2L 11317707 intergenic not near genes chr2L_8_11315001 chr2L_11315001 RAL-373_125b 398 chr2L 11357947 11358002 chr2L 11358075 11358130 16 128 4.0 3.0 3.5 3.6 183 chr2L 11357947 intergenic not near genes chr2L 11358038 intergenic not near genes chr2L 11358130 intergenic not near genes chr2L_16_11355001 chr2L_11355001 RAL-373_125b 399 chr2L 11399478 11399525 chr2L 11399605 11399650 6 125 2.0 0.0 1.0 3.0 172 chr2L 11399478 intergenic not near genes chr2L 11399564 intergenic not near genes chr2L 11399650 intergenic not near genes chr2L_6_11395001 chr2L_11395001 RAL-373_125b 400 chr2L 11413261 11413322 chr2L 11413424 11413496 21 170 3.0 6.5 4.8 3.6 235 chr2L 11413261 intergenic not near genes chr2L 11413378 intergenic not near genes chr2L 11413496 intergenic not near genes chr2L_21_11410001 chr2L_11410001 RAL-373_125b 401 chr2L 11418628 11418687 chr2L 11418746 11418781 15 118 2.5 4.5 3.5 3.3 153 chr2L 11418628 intergenic not near genes chr2L 11418704 intergenic not near genes chr2L 11418781 intergenic not near genes chr2L_15_11415001 chr2L_11415001 RAL-373_125b 402 chr2L 11491089 11491160 chr2L 11491209 11491266 14 117 8.0 7.0 7.5 1.6 177 chr2L 11491089 intergenic not near genes chr2L 11491178 intergenic not near genes chr2L 11491266 intergenic not near genes chr2L_14_11490001 chr2L_11490001 RAL-373_125b 403 chr2L 11537931 11537998 chr2L 11538074 11538131 18 129 3.5 5.5 4.5 3.3 200 chr2L 11537931 intergenic not near genes chr2L 11538031 intergenic not near genes chr2L 11538131 intergenic not near genes chr2L_18_11535001 chr2L_11535001 RAL-373_125b 404 chr2L 11540559 11540603 chr2L 11548011 11548050 Tabor 8 7451 5.0 5.0 5.0 1.3 7491 chr2L 11540559 intergenic not near genes chr2L 11544304 intergenic not near genes chr2L 11548050 intergenic not near genes chr2L_8_11540001 chr2L_11540001 RAL-373_125b 405 chr2L 11561680 11561732 chr2L 11561817 11561869 11 132 7.0 4.5 5.8 1.6 189 chr2L 11561680 5` UTR CR44495 + chr2L 11561774 5` UTR CR44495 + chr2L 11561869 5` UTR CR44495 + chr2L_11_11560001 chr2L_11560001 RAL-373_125b 406 chr2L 11561746 11561752 chr2L 11561881 11561888 4 136 3.0 10.0 6.5 0.5 142 chr2L 11561746 5` UTR CR44495 + chr2L 11561817 5` UTR CR44495 + chr2L 11561888 5` UTR CR44495 + chr2L_4_11560001 chr2L_11560001 RAL-373_125b 407 chr2L 11563593 11563646 chr2L 11568847 11568900 copia 19 5252 7.5 5.0 6.2 2.6 5307 chr2L 11563593 intergenic not near genes chr2L 11566246 intergenic not near genes chr2L 11568900 intergenic not near genes chr2L_19_11565001 chr2L_11565001 RAL-373_125b 408 chr2L 11571637 11571697 chr2L 11571826 11571890 16 189 3.0 11.5 7.2 2.0 253 chr2L 11571637 intergenic not near genes chr2L 11571764 intergenic not near genes chr2L 11571890 intergenic not near genes chr2L_16_11570001 chr2L_11570001 RAL-373_125b 409 chr2L 11608883 11608953 chr2L 11609015 11609085 13 121 4.0 9.5 6.8 1.7 202 chr2L 11608883 intron kek2 + chr2L 11608984 intron kek2 + chr2L 11609085 intron kek2 + chr2L_13_11605001 chr2L_11605001 RAL-373_125b 410 chr2L 11614042 11614084 chr2L 11615551 11615578 hopper2 12 1515 6.5 7.0 6.8 1.5 1536 chr2L 11614042 intron kek2 + chr2L 11614810 intron kek2 + chr2L 11615578 intron kek2 + chr2L_12_11610001 chr2L_11610001 RAL-373_125b 411 chr2L 11665813 11665868 chr2L 11665941 11665996 10 127 1.0 5.5 3.2 2.4 183 chr2L 11665813 intergenic CR44481 + chr2L 11665904 intergenic CR44481 + chr2L 11665996 intergenic CR44481 + chr2L_10_11665001 chr2L_11665001 RAL-373_125b 412 chr2L 11672095 11672166 chr2L 11672252 11672323 12 152 1.5 3.0 2.2 3.8 228 chr2L 11672095 intergenic not near genes chr2L 11672209 intergenic not near genes chr2L 11672323 intergenic not near genes chr2L_12_11670001 chr2L_11670001 RAL-373_125b 413 chr2L 11684335 11684341 chr2L 11684622 11684628 5 287 13.0 3.5 8.2 0.5 293 chr2L 11684335 intergenic not near genes chr2L 11684482 intergenic not near genes chr2L 11684628 intergenic not near genes chr2L_5_11680001 chr2L_11680001 RAL-373_125b 414 chr2L 11684343 11684372 chr2L 11684620 11684644 4 281 9.5 2.5 6.0 0.6 301 chr2L 11684343 intergenic not near genes chr2L 11684494 intergenic not near genes chr2L 11684644 intergenic not near genes chr2L_4_11680001 chr2L_11680001 RAL-373_125b 415 chr2L 11713468 11713490 chr2L 11720986 11721008 blood 8 7512 9.0 5.5 7.2 1.0 7540 chr2L 11713468 intergenic not near genes chr2L 11717238 intergenic not near genes chr2L 11721008 intergenic CR44143 + chr2L_8_11715001 chr2L_11715001 RAL-373_125b 416 chr2L 11713492 11713531 chr2L 11720979 11721044 blood 11 7510 4.0 5.5 4.8 1.9 7552 chr2L 11713492 intergenic not near genes chr2L 11717268 intergenic not near genes chr2L 11721044 intergenic CR44143 + chr2L_11_11715001 chr2L_11715001 RAL-373_125b 417 chr2L 11764147 11764217 chr2L 11764309 11764374 19 160 5.0 2.5 3.8 4.0 227 chr2L 11764147 intergenic not near genes chr2L 11764260 intergenic not near genes chr2L 11764374 intergenic not near genes chr2L_19_11760001 chr2L_11760001 RAL-373_125b 418 chr2L 11770571 11770631 chr2L 11770687 11770760 13 132 3.0 6.5 4.8 2.2 189 chr2L 11770571 intergenic not near genes chr2L 11770666 intergenic not near genes chr2L 11770760 intergenic not near genes chr2L_13_11770001 chr2L_11770001 RAL-373_125b 419 chr2L 11820396 11820445 chr2L 11820514 11820576 11 130 0.0 7.0 3.5 2.4 180 chr2L 11820396 intron Pde1c - chr2L 11820486 intron Pde1c - chr2L 11820576 intron Pde1c - chr2L_11_11820001 chr2L_11820001 RAL-373_125b 420 chr2L 11841319 11841369 chr2L 11841460 11841526 7 154 2.0 0.0 1.0 3.5 207 chr2L 11841319 intron Pde1c - chr2L 11841422 intron Pde1c - chr2L 11841526 intron Pde1c - chr2L_7_11840001 chr2L_11840001 RAL-373_125b 421 chr2L 11845026 11845103 chr2L 11845494 11845571 10 467 2.5 2.0 2.2 3.1 545 chr2L 11845026 intron Pde1c - chr2L 11845298 intron Pde1c - chr2L 11845571 intron Pde1c - chr2L_10_11845001 chr2L_11845001 RAL-373_125b 422 chr2L 11862308 11862372 chr2L 11862451 11862515 17 142 11.5 6.0 8.8 1.7 207 chr2L 11862308 intron Pde1c - chr2L 11862412 intron Pde1c - chr2L 11862515 intron Pde1c - chr2L_17_11860001 chr2L_11860001 RAL-373_125b 423 chr2L 11865476 11865540 chr2L 11865630 11865659 22 153 5.0 4.5 4.8 3.8 183 chr2L 11865476 intron Pde1c - chr2L 11865568 intron Pde1c - chr2L 11865659 intron Pde1c - chr2L_22_11865001 chr2L_11865001 RAL-373_125b 424 chr2L 11866961 11866994 chr2L 11867118 11867156 9 160 10.0 3.5 6.8 1.2 195 chr2L 11866961 intron Pde1c - chr2L 11867058 intron Pde1c - chr2L 11867156 intron Pde1c - chr2L_9_11865001 chr2L_11865001 RAL-373_125b 425 chr2L 11951969 11951996 chr2L 11952107 11952134 11 138 3.0 4.5 3.8 2.3 165 chr2L 11951969 intergenic CR43314 - chr2L 11952052 intergenic CR43314 - chr2L 11952134 intergenic CR43314 - chr2L_11_11950001 chr2L_11950001 RAL-373_125b 426 chr2L 11958314 11958390 chr2L 11958467 11958543 13 149 7.5 4.0 5.8 1.9 229 chr2L 11958314 3` UTR CR43314 - chr2L 11958428 3` UTR CR43314 - chr2L 11958543 3` UTR CR43314 - chr2L_13_11955001 chr2L_11955001 RAL-373_125b 427 chr2L 12026752 12026776 chr2L 12026983 12027007 4 231 2.5 0.0 1.2 1.8 255 chr2L 12026752 intergenic not near genes chr2L 12026880 intergenic not near genes chr2L 12027007 intergenic dmGlut + chr2L_4_12025001 chr2L_12025001 RAL-373_125b 428 chr2L 12058162 12058208 chr2L 12058279 12058321 6 123 3.5 4.5 4.0 1.2 159 chr2L 12058162 exon,3` UTR CG34164 +,RpL7-like + chr2L 12058242 3` UTR,3` UTR CG34164 +,RpL7-like + chr2L 12058321 3` UTR Rab3-GAP - chr2L_6_12055001 chr2L_12055001 RAL-373_125b 429 chr2L 12067285 12067349 chr2L 12074387 12074451 297 14 7101 5.5 9.5 7.5 1.6 7166 chr2L 12067285 intergenic not near genes chr2L 12070868 intergenic not near genes chr2L 12074451 intergenic not near genes chr2L_14_12070001 chr2L_12070001 RAL-373_125b 430 chr2L 12132694 12132742 chr2L 12132810 12132878 10 132 1.0 5.5 3.2 2.4 184 chr2L 12132694 intron rho-6 - chr2L 12132786 intron rho-6 - chr2L 12132878 intron rho-6 - chr2L_10_12130001 chr2L_12130001 RAL-373_125b 431 chr2L 12202605 12202652 chr2L 12202710 12202763 14 114 5.5 6.5 6.0 2.0 158 chr2L 12202605 intron aret + chr2L 12202684 intron aret + chr2L 12202763 intron aret + chr2L_14_12200001 chr2L_12200001 RAL-373_125b 432 chr2L 12266062 12266118 chr2L 12266194 12266250 10 132 4.5 4.0 4.2 1.9 188 chr2L 12266062 intron aret + chr2L 12266156 intron aret + chr2L 12266250 intron aret + chr2L_10_12265001 chr2L_12265001 RAL-373_125b 433 chr2L 12269362 12269399 chr2L 12269490 12269527 13 126 5.5 5.0 5.2 2.1 165 chr2L 12269362 intron aret + chr2L 12269444 intron aret + chr2L 12269527 intron aret + chr2L_13_12265001 chr2L_12265001 RAL-373_125b 434 chr2L 12272125 12272191 chr2L 12272244 12272313 16 125 5.0 3.5 4.2 3.1 188 chr2L 12272125 intron aret + chr2L 12272219 intron aret + chr2L 12272313 intron aret + chr2L_16_12270001 chr2L_12270001 RAL-373_125b 435 chr2L 12277264 12277313 chr2L 12277404 12277453 5 139 3.5 0.0 1.8 1.8 189 chr2L 12277264 intron aret + chr2L 12277358 intron aret + chr2L 12277453 intron aret + chr2L_5_12275001 chr2L_12275001 RAL-373_125b 436 chr2L 12294200 12294276 chr2L 12294333 12294409 20 132 2.0 0.0 1.0 10.0 209 chr2L 12294200 intron aret + chr2L 12294304 intron aret + chr2L 12294409 intron aret + chr2L_20_12290001 chr2L_12290001 RAL-373_125b 437 chr2L 12410968 12411012 chr2L 12411090 12411139 11 127 7.5 0.5 4.0 2.2 171 chr2L 12410968 intron vir-1 - chr2L 12411054 intron vir-1 - chr2L 12411139 intron vir-1 - chr2L_11_12410001 chr2L_12410001 RAL-373_125b 438 chr2L 12445228 12445306 chr2L 12445358 12445436 33 128 7.5 3.5 5.5 5.1 208 chr2L 12445228 intron Oatp33Ea - chr2L 12445332 intron Oatp33Ea - chr2L 12445436 intron Oatp33Ea - chr2L_33_12445001 chr2L_12445001 RAL-373_125b 439 chr2L 12471085 12471096 chr2L 12471211 12471222 4 125 11.5 10.0 10.8 0.3 137 chr2L 12471085 intron bun - chr2L 12471154 intron bun - chr2L 12471222 intron bun - chr2L_4_12470001 chr2L_12470001 RAL-373_125b 440 chr2L 12471100 12471138 chr2L 12471210 12471262 5 118 4.0 10.0 7.0 0.6 162 chr2L 12471100 intron bun - chr2L 12471181 intron bun - chr2L 12471262 intron bun - chr2L_5_12470001 chr2L_12470001 RAL-373_125b 441 chr2L 12487846 12487851 chr2L 12487977 12487982 4 131 17.5 6.0 11.8 0.3 136 chr2L 12487846 intron bun - chr2L 12487914 intron bun - chr2L 12487982 intron bun - chr2L_4_12485001 chr2L_12485001 RAL-373_125b 442 chr2L 12487853 12487906 chr2L 12487970 12488027 21 125 7.0 5.0 6.0 3.0 174 chr2L 12487853 intron bun - chr2L 12487940 intron bun - chr2L 12488027 intron bun - chr2L_21_12485001 chr2L_12485001 RAL-373_125b 443 chr2L 12529229 12529250 chr2L 12529412 12529433 6 183 5.0 0.0 2.5 1.7 204 chr2L 12529229 intron bun - chr2L 12529331 intron bun - chr2L 12529433 intron bun - chr2L_6_12525001 chr2L_12525001 RAL-373_125b 444 chr2L 12529251 12529385 chr2L 12529409 12529511 9 161 0.0 0.0 0.0 9.0 260 chr2L 12529251 intron bun - chr2L 12529381 intron bun - chr2L 12529511 intron bun - chr2L_9_12525001 chr2L_12525001 RAL-373_125b 445 chr2L 12558309 12558346 chr2L 12565452 12565521 HMS-Beagle 7 7169 3.5 5.0 4.2 1.3 7212 chr2L 12558309 intergenic not near genes chr2L 12561915 intergenic not near genes chr2L 12565521 intergenic not near genes chr2L_7_12560001 chr2L_12560001 RAL-373_125b 446 chr2L 12581343 12581396 chr2L 12581640 12581693 7 296 0.5 2.0 1.2 3.2 350 chr2L 12581343 intergenic CR44596 + chr2L 12581518 5` UTR CR44596 + chr2L 12581693 5` UTR CR44596 + chr2L_7_12580001 chr2L_12580001 RAL-373_125b 447 chr2L 12619868 12619902 chr2L 12619979 12620018 20 120 8.0 4.5 6.2 2.8 150 chr2L 12619868 intron,intron nub +,Ref2 - chr2L 12619943 intron,intron nub +,Ref2 - chr2L 12620018 intron,intron nub +,Ref2 - chr2L_20_12615001 chr2L_12615001 RAL-373_125b 448 chr2L 12638734 12638796 chr2L 12638887 12638929 23 152 7.5 4.5 6.0 3.3 195 chr2L 12638734 intron Ref2 - chr2L 12638832 intron Ref2 - chr2L 12638929 intron Ref2 - chr2L_23_12635001 chr2L_12635001 RAL-373_125b 449 chr2L 12728882 12728945 chr2L 12729167 12729235 pogo 23 282 7.0 4.5 5.8 3.4 353 chr2L 12728882 intron MRP + chr2L 12729058 intron MRP + chr2L 12729235 exon MRP + chr2L_23_12725001 chr2L_12725001 RAL-373_125b 450 chr2L 12731021 12731077 chr2L 12735828 12735894 F-element 10 4810 4.5 3.5 4.0 2.0 4873 chr2L 12731021 intron MRP + chr2L 12733458 intron MRP + chr2L 12735894 intron MRP + chr2L_10_12730001 chr2L_12730001 RAL-373_125b 451 chr2L 12739134 12739176 chr2L 12743965 12744002 Doc 9 4828 6.5 8.0 7.2 1.1 4868 chr2L 12739134 exon MRP + chr2L 12741568 intron MRP + chr2L 12744002 exon MRP + chr2L_9_12740001 chr2L_12740001 RAL-373_125b 452 chr2L 12751279 12751335 chr2L 12751412 12751467 11 130 4.5 7.0 5.8 1.6 188 chr2L 12751279 intergenic not near genes chr2L 12751373 intergenic not near genes chr2L 12751467 intergenic not near genes chr2L_11_12750001 chr2L_12750001 RAL-373_125b 453 chr2L 12753925 12753998 chr2L 12754079 12754152 19 152 7.0 9.0 8.0 2.1 227 chr2L 12753925 intergenic not near genes chr2L 12754038 intergenic not near genes chr2L 12754152 intergenic not near genes chr2L_19_12750001 chr2L_12750001 RAL-373_125b 454 chr2L 12763791 12763873 chr2L 12764042 12764130 BS 12 259 0.0 0.0 0.0 12.0 339 chr2L 12763791 intergenic not near genes chr2L 12763960 intergenic not near genes chr2L 12764130 intergenic not near genes chr2L_12_12760001 chr2L_12760001 RAL-373_125b 455 chr2L 12766709 12766760 chr2L 12766837 12766877 18 126 10.5 5.0 7.8 2.0 168 chr2L 12766709 intergenic not near genes chr2L 12766793 intergenic not near genes chr2L 12766877 intergenic not near genes chr2L_18_12765001 chr2L_12765001 RAL-373_125b 456 chr2L 12781767 12781802 chr2L 12789257 12789297 Quasimodo 10 7491 10.0 6.0 8.0 1.1 7530 chr2L 12781767 intergenic not near genes chr2L 12785532 intergenic not near genes chr2L 12789297 intergenic not near genes chr2L_10_12785001 chr2L_12785001 RAL-373_125b 457 chr2L 12791574 12791626 chr2L 12795289 12795298 F-element 22 3714 5.5 10.5 8.0 2.4 3724 chr2L 12791574 intergenic not near genes chr2L 12793436 intergenic not near genes chr2L 12795298 intergenic not near genes chr2L_22_12790001 chr2L_12790001 RAL-373_125b 458 chr2L 12807407 12807466 chr2L 12807525 12807571 12 127 1.5 8.5 5.0 2.0 164 chr2L 12807407 intergenic CR43818 - chr2L 12807489 intergenic CR43818 - chr2L 12807571 intergenic CR43818 - chr2L_12_12805001 chr2L_12805001 RAL-373_125b 459 chr2L 12835513 12835564 chr2L 12835662 12835723 9 155 3.0 2.0 2.5 2.6 210 chr2L 12835513 intergenic not near genes chr2L 12835618 intergenic not near genes chr2L 12835723 intergenic not near genes chr2L_9_12835001 chr2L_12835001 RAL-373_125b 460 chr2L 12848381 12848461 chr2L 12848523 12848598 17 139 3.0 4.0 3.5 3.8 217 chr2L 12848381 intergenic not near genes chr2L 12848490 intergenic not near genes chr2L 12848598 intergenic not near genes chr2L_17_12845001 chr2L_12845001 RAL-373_125b 461 chr2L 12861668 12861729 chr2L 12863180 12863195 hobo 16 1501 5.5 9.5 7.5 1.9 1527 chr2L 12861668 intergenic not near genes chr2L 12862432 intergenic not near genes chr2L 12863195 intergenic not near genes chr2L_16_12860001 chr2L_12860001 RAL-373_125b 462 chr2L 12879603 12879626 chr2L 12879741 12879764 6 136 5.0 13.5 9.2 0.6 161 chr2L 12879603 intergenic not near genes chr2L 12879684 intergenic not near genes chr2L 12879764 intergenic not near genes chr2L_6_12875001 chr2L_12875001 RAL-373_125b 463 chr2L 12887443 12887449 chr2L 12887568 12887579 4 128 2.0 4.0 3.0 1.0 136 chr2L 12887443 intergenic not near genes chr2L 12887511 intergenic not near genes chr2L 12887579 intergenic not near genes chr2L_4_12885001 chr2L_12885001 RAL-373_125b 464 chr2L 12893995 12894048 chr2L 12895491 12895545 hobo 9 1499 6.5 6.0 6.2 1.2 1550 chr2L 12893995 intergenic not near genes chr2L 12894770 intergenic not near genes chr2L 12895545 intergenic not near genes chr2L_9_12890001 chr2L_12890001 RAL-373_125b 465 chr2L 12905430 12905493 chr2L 12905564 12905624 14 132 6.0 5.0 5.5 2.2 194 chr2L 12905430 intergenic not near genes chr2L 12905527 intergenic not near genes chr2L 12905624 intergenic not near genes chr2L_14_12905001 chr2L_12905001 RAL-373_125b 466 chr2L 12933825 12933871 chr2L 12941327 12941377 blood 14 7514 5.5 9.0 7.2 1.7 7552 chr2L 12933825 intergenic not near genes chr2L 12937601 intergenic not near genes chr2L 12941377 intergenic not near genes chr2L_14_12935001 chr2L_12935001 RAL-373_125b 467 chr2L 12945941 12945949 chr2L 12946065 12946079 5 127 13.0 8.5 10.8 0.4 138 chr2L 12945941 intergenic not near genes chr2L 12946010 intergenic not near genes chr2L 12946079 intergenic not near genes chr2L_5_12945001 chr2L_12945001 RAL-373_125b 468 chr2L 12945953 12946001 chr2L 12946063 12946131 12 124 7.0 8.5 7.8 1.4 178 chr2L 12945953 intergenic not near genes chr2L 12946042 intergenic not near genes chr2L 12946131 intergenic not near genes chr2L_12_12945001 chr2L_12945001 RAL-373_125b 469 chr2L 12963754 12963822 chr2L 12963895 12963973 20 149 5.0 7.0 6.0 2.9 219 chr2L 12963754 intergenic not near genes chr2L 12963864 intergenic not near genes chr2L 12963973 intergenic not near genes chr2L_20_12960001 chr2L_12960001 RAL-373_125b 470 chr2L 13036201 13036267 chr2L 13036493 13036559 X-element 12 291 4.0 6.0 5.0 2.0 358 chr2L 13036201 intron CG9932 - chr2L 13036380 intron CG9932 - chr2L 13036559 intron CG9932 - chr2L_12_13035001 chr2L_13035001 RAL-373_125b 471 chr2L 13047932 13047978 chr2L 13048092 13048153 8 167 2.0 8.5 5.2 1.3 221 chr2L 13047932 intron CG9932 - chr2L 13048042 intron CG9932 - chr2L 13048153 intron CG9932 - chr2L_8_13045001 chr2L_13045001 RAL-373_125b 472 chr2L 13049352 13049406 chr2L 13049481 13049513 13 127 7.5 10.5 9.0 1.3 161 chr2L 13049352 intron CG9932 - chr2L 13049432 intron CG9932 - chr2L 13049513 intron CG9932 - chr2L_13_13045001 chr2L_13045001 RAL-373_125b 473 chr2L 13085577 13085603 chr2L 13085837 13085852 7 253 10.5 0.0 5.2 1.1 275 chr2L 13085577 intergenic not near genes chr2L 13085714 intergenic not near genes chr2L 13085852 intergenic not near genes chr2L_7_13085001 chr2L_13085001 RAL-373_125b 474 chr2L 13154062 13154125 chr2L 13154190 13154253 9 126 3.0 0.5 1.8 3.2 191 chr2L 13154062 intergenic not near genes chr2L 13154158 intergenic not near genes chr2L 13154253 intergenic not near genes chr2L_9_13150001 chr2L_13150001 RAL-373_125b 475 chr2L 13156419 13156472 chr2L 13156573 13156632 9 157 5.5 3.0 4.2 1.7 213 chr2L 13156419 intergenic not near genes chr2L 13156526 intergenic not near genes chr2L 13156632 intergenic not near genes chr2L_9_13155001 chr2L_13155001 RAL-373_125b 476 chr2L 13163498 13163515 chr2L 13163915 13163947 4 432 22.5 24.5 23.5 0.2 449 chr2L 13163498 3` UTR DnaJ-H - chr2L 13163722 exon DnaJ-H - chr2L 13163947 exon DnaJ-H - chr2L_4_13160001 chr2L_13160001 RAL-373_125b 477 chr2L 13204282 13204304 chr2L 13204415 13204428 4 130 12.0 4.0 8.0 0.4 146 chr2L 13204282 intron Pect + chr2L 13204355 intron Pect + chr2L 13204428 intron Pect + chr2L_4_13200001 chr2L_13200001 RAL-373_125b 478 chr2L 13255265 13255296 chr2L 13255453 13255489 5 192 0.0 8.0 4.0 1.0 224 chr2L 13255265 intron CG31728 + chr2L 13255377 intron CG31728 + chr2L 13255489 exon CG31728 + chr2L_5_13255001 chr2L_13255001 RAL-373_125b 479 chr2L 13316899 13316907 chr2L 13317032 13317040 4 132 2.5 9.5 6.0 0.6 141 chr2L 13316899 intron CG43778 - chr2L 13316970 intron CG43778 - chr2L 13317040 intron CG43778 - chr2L_4_13315001 chr2L_13315001 RAL-373_125b 480 chr2L 13393635 13393694 chr2L 13393759 13393834 11 133 3.5 1.0 2.2 3.4 199 chr2L 13393635 exon CG7099 + chr2L 13393734 3` UTR,3` UTR CG7099 +,RpL24 - chr2L 13393834 3` UTR,3` UTR CG7099 +,RpL24 - chr2L_11_13390001 chr2L_13390001 RAL-373_125b 481 chr2L 13393996 13394069 chr2L 13394138 13394211 22 140 5.5 7.5 6.5 2.9 215 chr2L 13393996 3` UTR RpL24 - chr2L 13394104 3` UTR RpL24 - chr2L 13394211 3` UTR RpL24 - chr2L_22_13390001 chr2L_13390001 RAL-373_125b 482 chr2L 13398667 13398747 chr2L 13398797 13398877 17 129 5.0 3.5 4.2 3.3 210 chr2L 13398667 intergenic CG10859 -,CR44600 -,CG7110 + chr2L 13398772 intergenic CR44600 -,CG10859 -,CG7110 + chr2L 13398877 3` UTR CR44600 - chr2L_17_13395001 chr2L_13395001 RAL-373_125b 483 chr2L 13405612 13405620 chr2L 13410459 13410464 Doc 4 4846 15.0 11.0 13.0 0.3 4852 chr2L 13405612 exon CG7110 + chr2L 13408038 intron CG7110 + chr2L 13410464 intron CG7110 + chr2L_4_13405001 chr2L_13405001 RAL-373_125b 484 chr2L 13405621 13405661 chr2L 13410452 13410508 Doc 11 4842 7.5 8.5 8.0 1.2 4887 chr2L 13405621 exon CG7110 + chr2L 13408064 intron CG7110 + chr2L 13410508 exon CG7110 + chr2L_11_13405001 chr2L_13405001 RAL-373_125b 485 chr2L 13412282 13412351 chr2L 13412459 13412528 16 177 5.0 2.0 3.5 3.6 246 chr2L 13412282 intergenic CG16848 + chr2L 13412405 intergenic CG16848 + chr2L 13412528 5` UTR CG16848 + chr2L_16_13410001 chr2L_13410001 RAL-373_125b 486 chr2L 13437306 13437372 chr2L 13437437 13437501 4 130 3.0 0.0 1.5 1.6 195 chr2L 13437306 intron,intron CG42784 +,Tehao + chr2L 13437404 intron,intron CG42784 +,Tehao + chr2L 13437501 intron,intron CG42784 +,Tehao + chr2L_4_13435001 chr2L_13435001 RAL-373_125b 487 chr2L 13449448 13449492 chr2L 13456934 13456978 Quasimodo 7 7486 3.0 13.0 8.0 0.8 7530 chr2L 13449448 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453213 intron CG42784 + chr2L 13456978 intron CG42784 + chr2L_7_13450001 chr2L_13450001 RAL-373_125b 488 chr2L 13473558 13473622 chr2L 13473685 13473749 18 124 3.5 2.0 2.8 4.7 191 chr2L 13473558 intron CG42784 + chr2L 13473654 intron CG42784 + chr2L 13473749 intron CG42784 + chr2L_18_13470001 chr2L_13470001 RAL-373_125b 489 chr2L 13481426 13481466 chr2L 13482070 13482107 jockey 16 652 9.0 6.0 7.5 1.9 681 chr2L 13481426 intron CG42784 + chr2L 13481766 intron CG42784 + chr2L 13482107 intron CG42784 + chr2L_16_13480001 chr2L_13480001 RAL-373_125b 490 chr2L 13522097 13522156 chr2L 13527665 13527724 Transpac 17 5566 0.0 9.0 4.5 3.1 5627 chr2L 13522097 intron B4 - chr2L 13524910 intron B4 - chr2L 13527724 intron B4 - chr2L_17_13520001 chr2L_13520001 RAL-373_125b 491 chr2L 13560371 13560420 chr2L 13565232 13565286 F-element 15 4868 6.5 6.5 6.5 2.0 4915 chr2L 13560371 intron kuz + chr2L 13562828 intron kuz + chr2L 13565286 intron kuz + chr2L_15_13560001 chr2L_13560001 RAL-373_125b 492 chr2L 13625689 13625719 chr2L 13626334 13626364 9 643 7.5 10.5 9.0 0.9 675 chr2L 13625689 intron kuz + chr2L 13626026 intron kuz + chr2L 13626364 intron kuz + chr2L_9_13625001 chr2L_13625001 RAL-373_125b 493 chr2L 13628054 13628103 chr2L 13628157 13628200 18 117 6.5 6.5 6.5 2.4 146 chr2L 13628054 intron kuz + chr2L 13628127 intron kuz + chr2L 13628200 intron kuz + chr2L_18_13625001 chr2L_13625001 RAL-373_125b 494 chr2L 13672659 13672704 chr2L 13672777 13672803 10 124 7.5 5.5 6.5 1.3 144 chr2L 13672659 3` UTR CG18507 + chr2L 13672731 intron CG18507 + chr2L 13672803 3` UTR CG18507 + chr2L_10_13670001 chr2L_13670001 RAL-373_125b 495 chr2L 13712807 13712841 chr2L 13712943 13712965 7 132 6.5 12.5 9.5 0.7 158 chr2L 13712807 intron CG31814 - chr2L 13712886 intron CG31814 - chr2L 13712965 intron CG31814 - chr2L_7_13710001 chr2L_13710001 RAL-373_125b 496 chr2L 13713510 13713563 chr2L 13713636 13713689 11 125 4.0 4.0 4.0 2.2 179 chr2L 13713510 intron CG31814 - chr2L 13713600 intron CG31814 - chr2L 13713689 intron CG31814 - chr2L_11_13710001 chr2L_13710001 RAL-373_125b 497 chr2L 13717579 13717652 chr2L 13717721 13717794 15 141 3.0 6.0 4.5 2.7 215 chr2L 13717579 intergenic CG31814 - chr2L 13717686 intergenic CG31814 - chr2L 13717794 intergenic CG31814 - chr2L_15_13715001 chr2L_13715001 RAL-373_125b 498 chr2L 13721452 13721504 chr2L 13721575 13721642 15 132 3.5 5.0 4.2 2.9 190 chr2L 13721452 intergenic not near genes chr2L 13721547 intergenic not near genes chr2L 13721642 intergenic not near genes chr2L_15_13720001 chr2L_13720001 RAL-373_125b 499 chr2L 13733725 13733783 chr2L 13733893 13733949 14 166 3.0 5.0 4.0 2.8 224 chr2L 13733725 intergenic not near genes chr2L 13733837 intergenic not near genes chr2L 13733949 intergenic not near genes chr2L_14_13730001 chr2L_13730001 RAL-373_125b 500 chr2L 13744288 13744331 chr2L 13744399 13744467 15 132 5.5 0.0 2.8 3.9 179 chr2L 13744288 intergenic not near genes chr2L 13744378 intergenic not near genes chr2L 13744467 intergenic not near genes chr2L_15_13740001 chr2L_13740001 RAL-373_125b 501 chr2L 13746710 13746763 chr2L 13746846 13746905 13 142 2.5 4.0 3.2 3.1 195 chr2L 13746710 intergenic CR44846 +,TM9SF4 + chr2L 13746808 intergenic CR44846 +,TM9SF4 + chr2L 13746905 intergenic CR44846 +,TM9SF4 + chr2L_13_13745001 chr2L_13745001 RAL-373_125b 502 chr2L 13761770 13761815 chr2L 13762931 13762971 Doc 9 1157 5.0 4.5 4.8 1.6 1201 chr2L 13761770 intron TM9SF4 + chr2L 13762370 intron TM9SF4 + chr2L 13762971 intron TM9SF4 + chr2L_9_13760001 chr2L_13760001 RAL-373_125b 503 chr2L 13800133 13800194 chr2L 13800287 13800348 17 153 7.0 8.0 7.5 2.0 215 chr2L 13800133 intergenic Sec71 + chr2L 13800240 intergenic not near genes chr2L 13800348 intergenic not near genes chr2L_17_13800001 chr2L_13800001 RAL-373_125b 504 chr2L 13853053 13853107 chr2L 13862252 13862307 roo 25 9199 5.5 7.0 6.2 3.5 9254 chr2L 13853053 intron CenG1A + chr2L 13857680 intron CenG1A + chr2L 13862307 intron CenG1A + chr2L_25_13855001 chr2L_13855001 RAL-373_125b 505 chr2L 13862282 13862345 chr2L 13862425 13862477 29 142 7.0 8.5 7.8 3.3 195 chr2L 13862282 intron CenG1A + chr2L 13862380 intron CenG1A + chr2L 13862477 intron CenG1A + chr2L_29_13860001 chr2L_13860001 RAL-373_125b 506 chr2L 13917698 13917748 chr2L 13917844 13917899 9 150 8.5 7.0 7.8 1.0 201 chr2L 13917698 intron Ance-3 + chr2L 13917798 intron Ance-3 + chr2L 13917899 intron Ance-3 + chr2L_9_13915001 chr2L_13915001 RAL-373_125b 507 chr2L 13952103 13952178 chr2L 13952235 13952310 4 132 7.0 3.0 5.0 0.7 207 chr2L 13952103 intron Ance-3 + chr2L 13952206 intron Ance-3 + chr2L 13952310 intron Ance-3 + chr2L_4_13950001 chr2L_13950001 RAL-373_125b 508 chr2L 14127158 14127210 chr2L 14127294 14127346 9 133 1.0 2.0 1.5 3.6 188 chr2L 14127158 intergenic not near genes chr2L 14127252 intergenic not near genes chr2L 14127346 intergenic not near genes chr2L_9_14125001 chr2L_14125001 RAL-373_125b 509 chr2L 14222270 14222328 chr2L 14222397 14222465 15 128 7.0 6.0 6.5 2.0 195 chr2L 14222270 intron Dyrk2 - chr2L 14222368 intron Dyrk2 - chr2L 14222465 intron Dyrk2 - chr2L_15_14220001 chr2L_14220001 RAL-373_125b 510 chr2L 14236195 14236263 chr2L 14236342 14236410 12 145 5.5 0.0 2.8 3.2 215 chr2L 14236195 5` UTR CR44728 + chr2L 14236302 5` UTR CR44728 + chr2L 14236410 intergenic CR44728 + chr2L_12_14235001 chr2L_14235001 RAL-373_125b 511 chr2L 14374735 14374801 chr2L 14374870 14374937 13 139 3.0 6.0 4.5 2.4 202 chr2L 14374735 intergenic not near genes chr2L 14374836 intergenic not near genes chr2L 14374937 intergenic not near genes chr2L_13_14370001 chr2L_14370001 RAL-373_125b 512 chr2L 14378604 14378679 chr2L 14378732 14378802 14 127 7.0 1.5 4.2 2.7 198 chr2L 14378604 3` UTR ppk - chr2L 14378703 3` UTR ppk - chr2L 14378802 3` UTR ppk - chr2L_14_14375001 chr2L_14375001 RAL-373_125b 513 chr2L 14393837 14393850 chr2L 14394026 14394039 6 189 8.0 9.5 8.8 0.6 202 chr2L 14393837 intron elB - chr2L 14393938 intron elB - chr2L 14394039 intron elB - chr2L_6_14390001 chr2L_14390001 RAL-373_125b 514 chr2L 14396163 14396219 chr2L 14398968 14399015 11 2802 32.5 28.0 30.2 0.4 2852 chr2L 14396163 intron elB - chr2L 14397589 intron elB - chr2L 14399015 intron elB - chr2L_11_14395001 chr2L_14395001 RAL-373_125b 515 chr2L 14396028 14396090 chr2L 14399097 14399161 28 3061 42.0 45.5 43.8 0.6 3133 chr2L 14396028 intron elB - chr2L 14397594 intron elB - chr2L 14399161 intron elB - chr2L_28_14395001 chr2L_14395001 RAL-373_125b 516 chr2L 14424121 14424193 chr2L 14424260 14424332 12 138 4.5 3.0 3.8 2.5 211 chr2L 14424121 intergenic Cpr35B - chr2L 14424226 intergenic Cpr35B - chr2L 14424332 3` UTR Cpr35B - chr2L_12_14420001 chr2L_14420001 RAL-373_125b 517 chr2L 14429395 14429446 chr2L 14429517 14429577 16 128 10.0 3.5 6.8 2.1 182 chr2L 14429395 3` UTR CR44732 - chr2L 14429486 3` UTR CR44732 - chr2L 14429577 3` UTR CR44732 - chr2L_16_14425001 chr2L_14425001 RAL-373_125b 518 chr2L 14462677 14462821 chr2L 14462814 14462967 5 144 0.0 0.0 0.0 5.0 290 chr2L 14462677 intergenic not near genes chr2L 14462822 intergenic not near genes chr2L 14462967 intergenic not near genes chr2L_5_14460001 chr2L_14460001 RAL-373_125b 519 chr2L 14503396 14503402 chr2L 14503525 14503525 4 127 7.0 5.0 6.0 0.6 129 chr2L 14503396 intergenic not near genes chr2L 14503460 intergenic not near genes chr2L 14503525 intergenic not near genes chr2L_4_14500001 chr2L_14500001 RAL-373_125b 520 chr2L 14503408 14503434 chr2L 14503521 14503563 6 126 2.5 4.5 3.5 1.3 155 chr2L 14503408 intergenic not near genes chr2L 14503486 intergenic not near genes chr2L 14503563 intergenic not near genes chr2L_6_14500001 chr2L_14500001 RAL-373_125b 521 chr2L 14524584 14524644 chr2L 14525123 14525186 14 543 3.0 6.0 4.5 2.5 602 chr2L 14524584 intron CG33648 + chr2L 14524885 intron CG33648 + chr2L 14525186 exon CG33648 + chr2L_14_14520001 chr2L_14520001 RAL-373_125b 522 chr2L 14554136 14554194 chr2L 14554242 14554311 23 117 5.0 8.5 6.8 2.9 175 chr2L 14554136 intergenic not near genes chr2L 14554224 intergenic not near genes chr2L 14554311 intergenic not near genes chr2L_23_14550001 chr2L_14550001 RAL-373_125b 523 chr2L 14555107 14555156 chr2L 14555236 14555285 9 129 6.5 4.5 5.5 1.4 178 chr2L 14555107 intergenic not near genes chr2L 14555196 intergenic not near genes chr2L 14555285 intergenic not near genes chr2L_9_14555001 chr2L_14555001 RAL-373_125b 524 chr2L 14588357 14588411 chr2L 14588550 14588610 16 202 2.5 8.0 5.2 2.6 253 chr2L 14588357 intergenic CG42680 - chr2L 14588484 intergenic CG42680 - chr2L 14588610 intergenic CG42680 - chr2L_16_14585001 chr2L_14585001 RAL-373_125b 525 chr2L 14588649 14588671 chr2L 14588990 14589012 5 341 3.5 7.5 5.5 0.8 363 chr2L 14588649 intergenic CG42680 - chr2L 14588830 intergenic not near genes chr2L 14589012 intergenic not near genes chr2L_5_14585001 chr2L_14585001 RAL-373_125b 526 chr2L 14618880 14618889 chr2L 14619301 14619315 jockey 5 428 5.0 4.0 4.5 0.9 435 chr2L 14618880 intron,3` UTR,3` UTR osp -,Adh +,Adhr + chr2L 14619098 intron osp - chr2L 14619315 intron osp - chr2L_5_14615001 chr2L_14615001 RAL-373_125b 527 chr2L 14694210 14694280 chr2L 14694384 14694441 8 172 3.5 3.5 3.5 1.8 231 chr2L 14694210 intergenic not near genes chr2L 14694326 intergenic not near genes chr2L 14694441 intergenic not near genes chr2L_8_14690001 chr2L_14690001 RAL-373_125b 528 chr2L 14707163 14707233 chr2L 14707331 14707402 14 168 3.5 0.5 2.0 4.7 239 chr2L 14707163 intergenic not near genes chr2L 14707282 intergenic not near genes chr2L 14707402 intergenic not near genes chr2L_14_14705001 chr2L_14705001 RAL-373_125b 529 chr2L 14778809 14778831 chr2L 14779102 14779169 5 326 6.5 5.5 6.0 0.7 360 chr2L 14778809 intergenic not near genes chr2L 14778989 intergenic not near genes chr2L 14779169 intergenic not near genes chr2L_5_14775001 chr2L_14775001 RAL-373_125b 530 chr2L 14782451 14782466 chr2L 14782584 14782599 5 133 7.0 5.0 6.0 0.7 148 chr2L 14782451 intergenic not near genes chr2L 14782525 intergenic not near genes chr2L 14782599 intergenic not near genes chr2L_5_14780001 chr2L_14780001 RAL-373_125b 531 chr2L 14803847 14803889 chr2L 14809100 14809122 copia 9 5250 10.5 5.0 7.8 1.0 5275 chr2L 14803847 intergenic not near genes chr2L 14806484 intergenic not near genes chr2L 14809122 intergenic not near genes chr2L_9_14805001 chr2L_14805001 RAL-373_125b 532 chr2L 14840931 14841007 chr2L 14841069 14841144 9 136 3.5 8.0 5.8 1.3 213 chr2L 14840931 3` UTR CR43805 - chr2L 14841038 3` UTR CR43805 - chr2L 14841144 3` UTR CR43805 - chr2L_9_14840001 chr2L_14840001 RAL-373_125b 533 chr2L 14887665 14887666 chr2L 14887793 14887794 4 128 9.0 3.0 6.0 0.6 129 chr2L 14887665 intergenic not near genes chr2L 14887730 intergenic not near genes chr2L 14887794 intergenic not near genes chr2L_4_14885001 chr2L_14885001 RAL-373_125b 534 chr2L 14889908 14889978 chr2L 14890383 14890453 jockey 14 473 5.0 5.5 5.2 2.3 545 chr2L 14889908 intergenic not near genes chr2L 14890180 intergenic not near genes chr2L 14890453 intergenic not near genes chr2L_14_14890001 chr2L_14890001 RAL-373_125b 535 chr2L 14933621 14933684 chr2L 14933746 14933810 19 120 5.5 3.0 4.2 3.7 189 chr2L 14933621 intron CG42313 - chr2L 14933716 intron CG42313 - chr2L 14933810 intron CG42313 - chr2L_19_14930001 chr2L_14930001 RAL-373_125b 536 chr2L 14984356 14984397 chr2L 14991988 14992036 opus 10 7646 9.0 6.0 7.5 1.2 7680 chr2L 14984356 intron mol - chr2L 14988196 intron mol - chr2L 14992036 intron mol - chr2L_10_14985001 chr2L_14985001 RAL-373_125b 537 chr2L 15003499 15003555 chr2L 15003633 15003674 13 129 8.0 6.5 7.2 1.6 175 chr2L 15003499 intergenic not near genes chr2L 15003586 intergenic not near genes chr2L 15003674 intergenic not near genes chr2L_13_15000001 chr2L_15000001 RAL-373_125b 538 chr2L 15013111 15013174 chr2L 15013265 15013328 9 152 2.5 4.0 3.2 2.1 217 chr2L 15013111 intergenic CR43856 - chr2L 15013220 intergenic not near genes chr2L 15013328 intergenic not near genes chr2L_9_15010001 chr2L_15010001 RAL-373_125b 539 chr2L 15014593 15014651 chr2L 15014713 15014780 5 115 0.5 4.5 2.5 1.4 187 chr2L 15014593 intergenic not near genes chr2L 15014686 intergenic not near genes chr2L 15014780 intergenic not near genes chr2L_5_15010001 chr2L_15010001 RAL-373_125b 540 chr2L 15044666 15044727 chr2L 15044785 15044859 6 124 2.0 0.5 1.2 2.7 193 chr2L 15044666 intergenic ck - chr2L 15044762 intergenic ck - chr2L 15044859 intergenic ck - chr2L_6_15040001 chr2L_15040001 RAL-373_125b 541 chr2L 15065405 15065431 chr2L 15065535 15065543 6 125 12.5 7.0 9.8 0.6 138 chr2L 15065405 intron,exon vas +,vig - chr2L 15065474 intron,intron vas +,vig - chr2L 15065543 intron,intron vas +,vig - chr2L_6_15065001 chr2L_15065001 RAL-373_125b 542 chr2L 15078021 15078090 chr2L 15078159 15078228 18 136 6.5 3.5 5.0 3.0 207 chr2L 15078021 intron CG15270 + chr2L 15078124 intron CG15270 + chr2L 15078228 intron CG15270 + chr2L_18_15075001 chr2L_15075001 RAL-373_125b 543 chr2L 15082625 15082686 chr2L 15082769 15082830 18 143 5.0 7.0 6.0 2.6 205 chr2L 15082625 intron CG15270 + chr2L 15082728 intron CG15270 + chr2L 15082830 intron CG15270 + chr2L_18_15080001 chr2L_15080001 RAL-373_125b 544 chr2L 15083598 15083671 chr2L 15084005 15084077 15 406 6.0 4.0 5.0 2.5 479 chr2L 15083598 intron CG15270 + chr2L 15083838 intron CG15270 + chr2L 15084077 intron CG15270 + chr2L_15_15080001 chr2L_15080001 RAL-373_125b 545 chr2L 15098492 15098539 chr2L 15098622 15098669 19 127 3.5 6.0 4.8 3.3 177 chr2L 15098492 intergenic not near genes chr2L 15098580 intergenic not near genes chr2L 15098669 intergenic not near genes chr2L_19_15095001 chr2L_15095001 RAL-373_125b 546 chr2L 15099905 15099943 chr2L 15100042 15100086 4 142 3.0 0.0 1.5 1.6 181 chr2L 15099905 intergenic not near genes chr2L 15099996 intergenic not near genes chr2L 15100086 intergenic not near genes chr2L_4_15095001 chr2L_15095001 RAL-373_125b 547 chr2L 15111933 15111953 chr2L 15112092 15112112 9 158 1.5 11.0 6.2 1.2 179 chr2L 15111933 intron CG15269 + chr2L 15112022 intron CG15269 + chr2L 15112112 exon CG15269 + chr2L_9_15110001 chr2L_15110001 RAL-373_125b 548 chr2L 15122732 15122745 chr2L 15122862 15122875 4 130 10.5 4.0 7.2 0.5 143 chr2L 15122732 intergenic not near genes chr2L 15122804 intergenic not near genes chr2L 15122875 intergenic not near genes chr2L_4_15120001 chr2L_15120001 RAL-373_125b 549 chr2L 15122750 15122797 chr2L 15122860 15122927 6 126 2.5 3.5 3.0 1.5 177 chr2L 15122750 intergenic not near genes chr2L 15122838 intergenic not near genes chr2L 15122927 intergenic not near genes chr2L_6_15120001 chr2L_15120001 RAL-373_125b 550 chr2L 15216080 15216131 chr2L 15216244 15216295 4 164 2.5 8.0 5.2 0.6 215 chr2L 15216080 3` UTR CG43230 + chr2L 15216188 intergenic CG43230 + chr2L 15216295 intergenic CG43230 + chr2L_4_15215001 chr2L_15215001 RAL-373_125b 551 chr2L 15235883 15235957 chr2L 15236028 15236095 13 141 1.5 2.5 2.0 4.3 212 chr2L 15235883 intron ZnT35C - chr2L 15235989 intron ZnT35C - chr2L 15236095 intron ZnT35C - chr2L_13_15235001 chr2L_15235001 RAL-373_125b 552 chr2L 15309316 15309356 chr2L 15309462 15309509 16 149 3.5 0.0 1.8 5.7 193 chr2L 15309316 intergenic not near genes chr2L 15309412 intergenic not near genes chr2L 15309509 intergenic not near genes chr2L_16_15305001 chr2L_15305001 RAL-373_125b 553 chr2L 15314254 15314324 chr2L 15314388 15314447 14 131 2.0 4.0 3.0 3.5 193 chr2L 15314254 intergenic not near genes chr2L 15314350 intergenic not near genes chr2L 15314447 intergenic not near genes chr2L_14_15310001 chr2L_15310001 RAL-373_125b 554 chr2L 15350863 15350918 chr2L 15350997 15351049 9 132 6.5 6.5 6.5 1.2 186 chr2L 15350863 intergenic not near genes chr2L 15350956 intergenic not near genes chr2L 15351049 intergenic not near genes chr2L_9_15350001 chr2L_15350001 RAL-373_125b 555 chr2L 15387380 15387404 chr2L 15387504 15387533 6 128 3.0 4.0 3.5 1.3 153 chr2L 15387380 intergenic not near genes chr2L 15387456 intergenic not near genes chr2L 15387533 intergenic not near genes chr2L_6_15385001 chr2L_15385001 RAL-373_125b 556 chr2L 15393720 15393764 chr2L 15393849 15393894 5 128 3.0 6.5 4.8 0.9 174 chr2L 15393720 intergenic not near genes chr2L 15393807 intergenic not near genes chr2L 15393894 intergenic not near genes chr2L_5_15390001 chr2L_15390001 RAL-373_125b 557 chr2L 15415439 15415491 chr2L 15415579 15415632 13 138 0.5 5.5 3.0 3.2 193 chr2L 15415439 intergenic not near genes chr2L 15415536 intergenic not near genes chr2L 15415632 intergenic not near genes chr2L_13_15415001 chr2L_15415001 RAL-373_125b 558 chr2L 15446007 15446066 chr2L 15453521 15453585 blood 13 7517 6.5 0.5 3.5 2.9 7578 chr2L 15446007 intergenic not near genes chr2L 15449796 intergenic not near genes chr2L 15453585 intergenic not near genes chr2L_13_15445001 chr2L_15445001 RAL-373_125b 559 chr2L 15458231 15458275 chr2L 15458369 15458413 7 134 3.5 5.0 4.2 1.3 182 chr2L 15458231 intergenic not near genes chr2L 15458322 intergenic not near genes chr2L 15458413 intergenic not near genes chr2L_7_15455001 chr2L_15455001 RAL-373_125b 560 chr2L 15482547 15482598 chr2L 15482718 15482778 10 182 4.5 5.0 4.8 1.7 231 chr2L 15482547 intergenic not near genes chr2L 15482662 intergenic not near genes chr2L 15482778 intergenic not near genes chr2L_10_15480001 chr2L_15480001 RAL-373_125b 561 chr2L 15499865 15499936 chr2L 15500003 15500073 11 137 6.5 2.5 4.5 2.0 208 chr2L 15499865 intron lace + chr2L 15499969 intron lace + chr2L 15500073 intron lace + chr2L_11_15495001 chr2L_15495001 RAL-373_125b 562 chr2L 15514280 15514325 chr2L 15514414 15514459 10 132 9.5 14.0 11.8 0.8 179 chr2L 15514280 intergenic not near genes chr2L 15514370 intergenic not near genes chr2L 15514459 intergenic not near genes chr2L_10_15510001 chr2L_15510001 RAL-373_125b 563 chr2L 15534907 15534976 chr2L 15535284 15535349 9 378 2.0 4.0 3.0 2.2 442 chr2L 15534907 intergenic not near genes chr2L 15535128 intergenic not near genes chr2L 15535349 intergenic not near genes chr2L_9_15535001 chr2L_15535001 RAL-373_125b 564 chr2L 15586390 15586421 chr2L 15593483 15593518 297 11 7101 6.5 6.5 6.5 1.5 7128 chr2L 15586390 intergenic not near genes chr2L 15589954 intergenic not near genes chr2L 15593518 intergenic not near genes chr2L_11_15585001 chr2L_15585001 RAL-373_125b 565 chr2L 15598755 15598799 chr2L 15598874 15598922 7 125 2.0 0.0 1.0 3.5 167 chr2L 15598755 intergenic not near genes chr2L 15598838 intergenic not near genes chr2L 15598922 intergenic not near genes chr2L_7_15595001 chr2L_15595001 RAL-373_125b 566 chr2L 15601288 15601361 chr2L 15601415 15601488 21 125 4.5 5.0 4.8 3.6 200 chr2L 15601288 intergenic not near genes chr2L 15601388 intergenic not near genes chr2L 15601488 intergenic not near genes chr2L_21_15600001 chr2L_15600001 RAL-373_125b 567 chr2L 15636627 15636695 chr2L 15636753 15636817 8 124 2.5 4.0 3.2 1.9 190 chr2L 15636627 intergenic not near genes chr2L 15636722 intergenic not near genes chr2L 15636817 intergenic not near genes chr2L_8_15635001 chr2L_15635001 RAL-373_125b 568 chr2L 15749976 15750267 chr2L 15750139 15750401 7 156 0.0 0.0 0.0 7.0 425 chr2L 15749976 intron l(2)35Di - chr2L 15750188 intron l(2)35Di - chr2L 15750401 intron l(2)35Di - chr2L_7_15750001 chr2L_15750001 RAL-373_125b 569 chr2L 15751432 15751448 chr2L 15751559 15751567 6 124 8.0 7.5 7.8 0.7 135 chr2L 15751432 intergenic snRNA:U5:35D -,l(2)35Di - chr2L 15751500 intergenic snRNA:U5:35D -,l(2)35Di - chr2L 15751567 3` UTR snRNA:U5:35D - chr2L_6_15750001 chr2L_15750001 RAL-373_125b 570 chr2L 15823302 15823370 chr2L 15823428 15823484 5 120 3.5 5.0 4.2 1.0 182 chr2L 15823302 intergenic CR44601 - chr2L 15823393 intergenic CR44601 - chr2L 15823484 intergenic not near genes chr2L_5_15820001 chr2L_15820001 RAL-373_125b 571 chr2L 15826850 15826887 chr2L 15829288 15829331 Tabor 8 2443 5.0 4.0 4.5 1.5 2481 chr2L 15826850 intergenic not near genes chr2L 15828090 intergenic not near genes chr2L 15829331 intergenic not near genes chr2L_8_15825001 chr2L_15825001 RAL-373_125b 572 chr2L 15954135 15954184 chr2L 15954264 15954313 13 129 6.5 5.5 6.0 1.9 178 chr2L 15954135 intron beat-Ib - chr2L 15954224 intron beat-Ib - chr2L 15954313 intron beat-Ib - chr2L_13_15950001 chr2L_15950001 RAL-373_125b 573 chr2L 15955979 15956055 chr2L 15957496 15957546 hobo 18 1512 9.0 8.0 8.5 1.9 1567 chr2L 15955979 intron beat-Ib - chr2L 15956762 intron beat-Ib - chr2L 15957546 intron beat-Ib - chr2L_18_15955001 chr2L_15955001 RAL-373_125b 574 chr2L 16001450 16001485 chr2L 16001588 16001618 6 137 2.5 7.5 5.0 1.0 168 chr2L 16001450 intron beat-Ic + chr2L 16001534 intron beat-Ic + chr2L 16001618 intron beat-Ic + chr2L_6_16000001 chr2L_16000001 RAL-373_125b 575 chr2L 16043523 16043595 chr2L 16043648 16043730 11 133 1.5 1.5 1.5 4.4 207 chr2L 16043523 intron,intron BicC +,CG45084 + chr2L 16043626 intron,intron BicC +,CG45084 + chr2L 16043730 intron,intron BicC +,CG45084 + chr2L_11_16040001 chr2L_16040001 RAL-373_125b 576 chr2L 16058085 16058139 chr2L 16058271 16058330 14 190 5.0 4.0 4.5 2.5 245 chr2L 16058085 intron beat-Ia + chr2L 16058208 intron beat-Ia + chr2L 16058330 intron beat-Ia + chr2L_14_16055001 chr2L_16055001 RAL-373_125b 577 chr2L 16058635 16058687 chr2L 16058748 16058816 9 129 5.5 5.0 5.2 1.5 181 chr2L 16058635 intron beat-Ia + chr2L 16058726 intron beat-Ia + chr2L 16058816 intron beat-Ia + chr2L_9_16055001 chr2L_16055001 RAL-373_125b 578 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 5 145889 21.0 20.0 20.5 0.2 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_5_16140001 chr2L_16140001 RAL-373_125b 579 chr2L 16074425 16074452 chr2L 16074625 16074652 9 199 11.5 1.5 6.5 1.2 227 chr2L 16074425 intron beat-Ia + chr2L 16074538 intron beat-Ia + chr2L 16074652 intron beat-Ia + chr2L_9_16070001 chr2L_16070001 RAL-373_125b 580 chr2L 16074456 16074479 chr2L 16074621 16074679 10 194 9.0 1.5 5.2 1.6 223 chr2L 16074456 intron beat-Ia + chr2L 16074568 intron beat-Ia + chr2L 16074679 intron beat-Ia + chr2L_10_16070001 chr2L_16070001 RAL-373_125b 581 chr2L 16084544 16084609 chr2L 16084706 16084768 14 159 2.0 4.0 3.0 3.5 224 chr2L 16084544 intergenic not near genes chr2L 16084656 intergenic not near genes chr2L 16084768 intergenic not near genes chr2L_14_16080001 chr2L_16080001 RAL-373_125b 582 chr2L 16141129 16141186 chr2L 16146376 16146443 copia 12 5253 4.0 6.0 5.0 2.0 5314 chr2L 16141129 intergenic not near genes chr2L 16143786 intergenic not near genes chr2L 16146443 intergenic not near genes chr2L_12_16140001 chr2L_16140001 RAL-373_125b 583 chr2L 16153698 16153741 chr2L 16160816 16160853 297 10 7115 9.0 6.0 7.5 1.2 7155 chr2L 16153698 intergenic not near genes chr2L 16157276 intergenic not near genes chr2L 16160853 intergenic not near genes chr2L_10_16155001 chr2L_16155001 RAL-373_125b 584 chr2L 16200831 16200872 chr2L 16200959 16200974 7 120 7.0 7.0 7.0 0.9 143 chr2L 16200831 intergenic not near genes chr2L 16200902 intergenic not near genes chr2L 16200974 intergenic not near genes chr2L_7_16200001 chr2L_16200001 RAL-373_125b 585 chr2L 16207048 16207089 chr2L 16207175 16207216 9 126 1.5 6.0 3.8 1.9 168 chr2L 16207048 intergenic not near genes chr2L 16207132 intergenic not near genes chr2L 16207216 intergenic not near genes chr2L_9_16205001 chr2L_16205001 RAL-373_125b 586 chr2L 9084336 9084340 chr2L 16217660 16217660 9 7133321 19.5 20.0 19.8 0.4 7133324 chr2L 9084336 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_9_12650001 chr2L_12650001 RAL-373_125b 587 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 13 145889 21.0 20.0 20.5 0.6 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_13_16140001 chr2L_16140001 RAL-373_125b 588 chr2L 16242031 16242065 chr2L 16242173 16242202 8 140 4.5 0.0 2.2 2.5 171 chr2L 16242031 5` UTR CG42818 + chr2L 16242116 exon CG42818 + chr2L 16242202 exon CG42818 + chr2L_8_16240001 chr2L_16240001 RAL-373_125b 589 chr2L 16243182 16243365 chr2L 16243304 16243495 29 127 0.0 0.0 0.0 29.0 313 chr2L 16243182 exon CG42818 + chr2L 16243338 exon CG42818 + chr2L 16243495 exon CG42818 + chr2L_29_16240001 chr2L_16240001 RAL-373_125b 590 chr2L 16250930 16250987 chr2L 16251074 16251131 17 142 8.0 5.5 6.8 2.2 201 chr2L 16250930 intron PRL-1 - chr2L 16251030 intron PRL-1 - chr2L 16251131 intron PRL-1 - chr2L_17_16250001 chr2L_16250001 RAL-373_125b 591 chr2L 16254841 16254915 chr2L 16255150 16255224 16 306 4.0 5.5 4.8 2.8 383 chr2L 16254841 intron PRL-1 - chr2L 16255032 intron PRL-1 - chr2L 16255224 intron PRL-1 - chr2L_16_16255001 chr2L_16255001 RAL-373_125b 592 chr2L 16280250 16280271 chr2L 16281445 16281477 1360 4 1207 8.5 4.0 6.2 0.6 1227 chr2L 16280250 intron crp - chr2L 16280864 intron crp - chr2L 16281477 intron crp - chr2L_4_16280001 chr2L_16280001 RAL-373_125b 593 chr2L 16354537 16354581 chr2L 16354678 16354727 16 142 3.5 0.0 1.8 5.7 190 chr2L 16354537 3` UTR CG4455 + chr2L 16354632 intergenic CG4455 +,CaBP1 - chr2L 16354727 intergenic CaBP1 -,CG4455 + chr2L_16_16350001 chr2L_16350001 RAL-373_125b 594 chr2L 16367097 16367128 chr2L 16367224 16367255 8 123 0.0 9.0 4.5 1.5 158 chr2L 16367097 intergenic jhamt + chr2L 16367176 intergenic jhamt + chr2L 16367255 intergenic jhamt + chr2L_8_16365001 chr2L_16365001 RAL-373_125b 595 chr2L 16387351 16387418 chr2L 16387483 16387550 12 129 2.5 3.0 2.8 3.2 199 chr2L 16387351 intergenic not near genes chr2L 16387450 intergenic not near genes chr2L 16387550 intergenic not near genes chr2L_12_16385001 chr2L_16385001 RAL-373_125b 596 chr2L 16394918 16394937 chr2L 16395048 16395067 6 132 2.5 14.0 8.2 0.7 149 chr2L 16394918 intergenic not near genes chr2L 16394992 intergenic not near genes chr2L 16395067 intergenic not near genes chr2L_6_16390001 chr2L_16390001 RAL-373_125b 597 chr2L 16429871 16429913 chr2L 16429994 16430057 12 146 3.5 6.0 4.8 2.1 186 chr2L 16429871 intron CG5888 - chr2L 16429964 intron CG5888 - chr2L 16430057 intron CG5888 - chr2L_12_16425001 chr2L_16425001 RAL-373_125b 598 chr2L 16432456 16432499 chr2L 16432591 16432617 11 129 10.0 0.0 5.0 1.8 161 chr2L 16432456 intron CG5888 - chr2L 16432536 intron CG5888 - chr2L 16432617 intron CG5888 - chr2L_11_16430001 chr2L_16430001 RAL-373_125b 599 chr2L 16487847 16487929 chr2L 16488007 16488084 12 158 4.5 6.0 5.2 1.9 237 chr2L 16487847 intergenic CG4580 + chr2L 16487966 intergenic CG4580 + chr2L 16488084 intergenic CG4580 + chr2L_12_16485001 chr2L_16485001 RAL-373_125b 600 chr2L 16507945 16507964 chr2L 16508063 16508102 7 135 0.0 10.0 5.0 1.2 157 chr2L 16507945 intergenic CG5953 -,Tpr2 + chr2L 16508024 intergenic CG5953 -,Tpr2 + chr2L 16508102 3` UTR CG5953 - chr2L_7_16505001 chr2L_16505001 RAL-373_125b 601 chr2L 16511937 16511993 chr2L 16519114 16519170 HMS-Beagle 7 7177 5.0 4.5 4.8 1.2 7233 chr2L 16511937 intron CG5953 - chr2L 16515554 intron CG5953 - chr2L 16519170 intron CG5953 - chr2L_7_16515001 chr2L_16515001 RAL-373_125b 602 chr2L 16524012 16524050 chr2L 16524192 16524230 11 176 6.0 6.0 6.0 1.6 218 chr2L 16524012 intron CG5953 - chr2L 16524121 intron CG5953 - chr2L 16524230 intron CG5953 - chr2L_11_16520001 chr2L_16520001 RAL-373_125b 603 chr2L 16524052 16524064 chr2L 16524182 16524244 7 166 3.5 6.0 4.8 1.2 192 chr2L 16524052 intron CG5953 - chr2L 16524148 intron CG5953 - chr2L 16524244 intron CG5953 - chr2L_7_16520001 chr2L_16520001 RAL-373_125b 604 chr2L 16537291 16537350 chr2L 16537417 16537471 12 123 7.0 6.0 6.5 1.6 180 chr2L 16537291 intergenic not near genes chr2L 16537381 intergenic not near genes chr2L 16537471 intergenic not near genes chr2L_12_16535001 chr2L_16535001 RAL-373_125b 605 chr2L 16538846 16538911 chr2L 16538971 16539006 8 116 5.5 6.0 5.8 1.2 160 chr2L 16538846 intergenic not near genes chr2L 16538926 intergenic not near genes chr2L 16539006 intergenic not near genes chr2L_8_16535001 chr2L_16535001 RAL-373_125b 606 chr2L 16583074 16583116 chr2L 16583202 16583254 9 136 4.0 9.0 6.5 1.2 180 chr2L 16583074 intron CG42389 + chr2L 16583164 intron CG42389 + chr2L 16583254 intron CG42389 + chr2L_9_16580001 chr2L_16580001 RAL-373_125b 607 chr2L 16583505 16583577 chr2L 16583689 16583761 15 182 6.0 3.5 4.8 2.6 256 chr2L 16583505 intron CG42389 + chr2L 16583633 intron CG42389 + chr2L 16583761 intron CG42389 + chr2L_15_16580001 chr2L_16580001 RAL-373_125b 608 chr2L 16593987 16594100 chr2L 16594114 16594240 8 127 0.0 0.0 0.0 8.0 253 chr2L 16593987 intron CG42389 + chr2L 16594114 intron CG42389 + chr2L 16594240 intron CG42389 + chr2L_8_16590001 chr2L_16590001 RAL-373_125b 609 chr2L 16616542 16616607 chr2L 16616670 16616741 21 125 4.5 13.0 8.8 2.1 199 chr2L 16616542 intron CG42389 + chr2L 16616642 intron CG42389 + chr2L 16616741 intron CG42389 + chr2L_21_16615001 chr2L_16615001 RAL-373_125b 610 chr2L 16670385 16670443 chr2L 16670495 16670570 17 122 5.5 2.0 3.8 3.5 185 chr2L 16670385 intron Trpgamma - chr2L 16670478 intron Trpgamma - chr2L 16670570 intron Trpgamma - chr2L_17_16670001 chr2L_16670001 RAL-373_125b 611 chr2L 16672362 16672375 chr2L 16672472 16672505 4 129 8.5 0.0 4.2 0.8 143 chr2L 16672362 intron Trpgamma - chr2L 16672434 intron Trpgamma - chr2L 16672505 intron Trpgamma - chr2L_4_16670001 chr2L_16670001 RAL-373_125b 612 chr2L 16694095 16694160 chr2L 16694226 16694260 9 108 7.0 12.0 9.5 0.9 165 chr2L 16694095 intron grp + chr2L 16694178 intron grp + chr2L 16694260 intron grp + chr2L_9_16690001 chr2L_16690001 RAL-373_125b 613 chr2L 16695212 16695264 chr2L 16695346 16695398 10 131 7.0 2.5 4.8 1.7 186 chr2L 16695212 intron grp + chr2L 16695305 intron grp + chr2L 16695398 intron grp + chr2L_10_16695001 chr2L_16695001 RAL-373_125b 614 chr2L 16697034 16697085 chr2L 16697262 16697321 7 239 2.0 4.0 3.0 1.8 287 chr2L 16697034 intron grp + chr2L 16697178 intron grp + chr2L 16697321 intron grp + chr2L_7_16695001 chr2L_16695001 RAL-373_125b 615 chr2L 16703615 16703654 chr2L 16703909 16703945 6 292 0.0 3.5 1.8 2.1 330 chr2L 16703615 intergenic not near genes chr2L 16703780 intergenic not near genes chr2L 16703945 intergenic CG31808 - chr2L_6_16700001 chr2L_16700001 RAL-373_125b 616 chr2L 16764922 16764995 chr2L 16765051 16765125 19 129 4.0 2.5 3.2 4.5 203 chr2L 16764922 intergenic not near genes chr2L 16765024 intergenic not near genes chr2L 16765125 intergenic not near genes chr2L_19_16765001 chr2L_16765001 RAL-373_125b 617 chr2L 16791179 16791220 chr2L 16791315 16791356 9 135 9.0 7.5 8.2 1.0 177 chr2L 16791179 intergenic CG17928 +,Cyt-b5-r - chr2L 16791268 intergenic CG17928 + chr2L 16791356 intergenic CG17928 + chr2L_9_16790001 chr2L_16790001 RAL-373_125b 618 chr2L 16796067 16796079 chr2L 16796214 16796220 6 148 0.0 8.0 4.0 1.2 153 chr2L 16796067 intergenic Ugt36Ba + chr2L 16796144 intergenic Ugt36Ba +,Ugt36Bb + chr2L 16796220 intergenic Ugt36Ba +,Ugt36Bb + chr2L_6_16795001 chr2L_16795001 RAL-373_125b 619 chr2L 16796080 16796108 chr2L 16796211 16796259 10 148 0.0 8.0 4.0 2.0 179 chr2L 16796080 intergenic Ugt36Ba + chr2L 16796170 intergenic Ugt36Ba +,Ugt36Bb + chr2L 16796259 intergenic Ugt36Ba +,Ugt36Bb + chr2L_10_16795001 chr2L_16795001 RAL-373_125b 620 chr2L 16919989 16920033 chr2L 16920092 16920156 10 120 3.0 3.5 3.2 2.4 167 chr2L 16919989 intergenic not near genes chr2L 16920072 intergenic not near genes chr2L 16920156 intergenic not near genes chr2L_10_16920001 chr2L_16920001 RAL-373_125b 621 chr2L 16927234 16927291 chr2L 16927365 16927412 11 124 7.5 5.0 6.2 1.5 178 chr2L 16927234 intergenic not near genes chr2L 16927323 intergenic not near genes chr2L 16927412 intergenic not near genes chr2L_11_16925001 chr2L_16925001 RAL-373_125b 622 chr2L 16949576 16949646 chr2L 16949709 16949780 7 132 2.5 0.5 1.5 2.8 204 chr2L 16949576 intron CR44393 - chr2L 16949678 intron CR44393 - chr2L 16949780 intron CR44393 - chr2L_7_16945001 chr2L_16945001 RAL-373_125b 623 chr2L 16952073 16952142 chr2L 16952206 16952278 6 138 0.0 7.0 3.5 1.3 205 chr2L 16952073 intergenic not near genes chr2L 16952176 intergenic not near genes chr2L 16952278 intergenic not near genes chr2L_6_16950001 chr2L_16950001 RAL-373_125b 624 chr2L 16958066 16958134 chr2L 16962899 16962937 Doc 15 4834 5.0 4.5 4.8 2.6 4871 chr2L 16958066 intergenic not near genes chr2L 16960502 intergenic not near genes chr2L 16962937 intergenic not near genes chr2L_15_16960001 chr2L_16960001 RAL-373_125b 625 chr2L 17005367 17005384 chr2L 17005514 17005531 5 145 10.5 4.5 7.5 0.6 164 chr2L 17005367 intergenic not near genes chr2L 17005449 intergenic not near genes chr2L 17005531 intergenic not near genes chr2L_5_17005001 chr2L_17005001 RAL-373_125b 626 chr2L 17005392 17005429 chr2L 17005509 17005576 12 130 4.5 3.5 4.0 2.4 184 chr2L 17005392 intergenic not near genes chr2L 17005484 intergenic not near genes chr2L 17005576 intergenic not near genes chr2L_12_17005001 chr2L_17005001 RAL-373_125b 627 chr2L 17032457 17032520 chr2L 17032592 17032655 10 134 4.0 7.5 5.8 1.5 198 chr2L 17032457 intergenic not near genes chr2L 17032556 intergenic not near genes chr2L 17032655 intergenic not near genes chr2L_10_17030001 chr2L_17030001 RAL-373_125b 628 chr2L 17033865 17033940 chr2L 17034001 17034071 11 133 3.0 1.0 2.0 3.7 206 chr2L 17033865 intergenic not near genes chr2L 17033968 intergenic not near genes chr2L 17034071 intergenic not near genes chr2L_11_17030001 chr2L_17030001 RAL-373_125b 629 chr2L 17052362 17052438 chr2L 17052524 17052595 14 160 2.5 1.5 2.0 4.7 233 chr2L 17052362 intergenic not near genes chr2L 17052478 intergenic not near genes chr2L 17052595 intergenic not near genes chr2L_14_17050001 chr2L_17050001 RAL-373_125b 630 chr2L 17062713 17062764 chr2L 17062840 17062896 6 131 4.5 3.0 3.8 1.2 183 chr2L 17062713 intergenic not near genes chr2L 17062804 intergenic not near genes chr2L 17062896 intergenic not near genes chr2L_6_17060001 chr2L_17060001 RAL-373_125b 631 chr2L 17070152 17070171 chr2L 17070298 17070307 4 141 9.5 1.5 5.5 0.6 155 chr2L 17070152 intergenic not near genes chr2L 17070230 intergenic not near genes chr2L 17070307 intergenic not near genes chr2L_4_17070001 chr2L_17070001 RAL-373_125b 632 chr2L 17070177 17070199 chr2L 17070297 17070345 5 137 7.5 1.5 4.5 0.9 168 chr2L 17070177 intergenic not near genes chr2L 17070261 intergenic not near genes chr2L 17070345 intergenic not near genes chr2L_5_17070001 chr2L_17070001 RAL-373_125b 633 chr2L 17120808 17120868 chr2L 17120922 17120997 11 126 3.5 8.5 6.0 1.6 189 chr2L 17120808 intergenic not near genes chr2L 17120902 intergenic not near genes chr2L 17120997 intergenic not near genes chr2L_11_17120001 chr2L_17120001 RAL-373_125b 634 chr2L 17158690 17158754 chr2L 17158837 17158902 13 149 3.5 3.5 3.5 2.9 212 chr2L 17158690 5` UTR,exon CG34106 +,beat-IIIa + chr2L 17158796 intron,intron CG34106 +,beat-IIIa + chr2L 17158902 intron,intron CG34106 +,beat-IIIa + chr2L_13_17155001 chr2L_17155001 RAL-373_125b 635 chr2L 17167536 17167571 chr2L 17167817 17167858 pogo 7 289 7.5 5.5 6.5 0.9 322 chr2L 17167536 intron,intron CG34106 +,beat-IIIa + chr2L 17167697 intron,intron CG34106 +,beat-IIIa + chr2L 17167858 intron,intron CG34106 +,beat-IIIa + chr2L_7_17165001 chr2L_17165001 RAL-373_125b 636 chr2L 17199123 17199179 chr2L 17200635 17200696 hobo 16 1516 4.5 5.0 4.8 2.8 1573 chr2L 17199123 intron beat-IIIc - chr2L 17199910 intron beat-IIIc - chr2L 17200696 intron beat-IIIc - chr2L_16_17195001 chr2L_17195001 RAL-373_125b 637 chr2L 17261167 17261185 chr2L 17261308 17261326 7 140 3.0 2.0 2.5 2.0 159 chr2L 17261167 intergenic beat-IIIc - chr2L 17261246 intergenic not near genes chr2L 17261326 intergenic not near genes chr2L_7_17260001 chr2L_17260001 RAL-373_125b 638 chr2L 17264715 17264765 chr2L 17264846 17264895 19 128 5.5 3.5 4.5 3.5 180 chr2L 17264715 intergenic not near genes chr2L 17264805 intergenic not near genes chr2L 17264895 intergenic not near genes chr2L_19_17260001 chr2L_17260001 RAL-373_125b 639 chr2L 17273173 17273218 chr2L 17278006 17278046 F-element 16 4831 2.5 6.0 4.2 3.1 4873 chr2L 17273173 intergenic not near genes chr2L 17275610 intergenic not near genes chr2L 17278046 intergenic not near genes chr2L_16_17275001 chr2L_17275001 RAL-373_125b 640 chr2L 17289185 17289229 chr2L 17289312 17289353 7 123 9.5 1.0 5.2 1.1 168 chr2L 17289185 intergenic not near genes chr2L 17289269 intergenic not near genes chr2L 17289353 intergenic not near genes chr2L_7_17285001 chr2L_17285001 RAL-373_125b 641 chr2L 17327870 17327922 chr2L 17328000 17328048 15 130 7.5 4.5 6.0 2.1 178 chr2L 17327870 intergenic not near genes chr2L 17327959 intergenic not near genes chr2L 17328048 intergenic not near genes chr2L_15_17325001 chr2L_17325001 RAL-373_125b 642 chr2L 17329035 17329084 chr2L 17329213 17329262 6 176 4.0 4.0 4.0 1.2 227 chr2L 17329035 intergenic not near genes chr2L 17329148 intergenic not near genes chr2L 17329262 intergenic not near genes chr2L_6_17325001 chr2L_17325001 RAL-373_125b 643 chr2L 17344684 17344759 chr2L 17344843 17344913 18 155 4.5 5.0 4.8 3.1 229 chr2L 17344684 intergenic not near genes chr2L 17344798 intergenic not near genes chr2L 17344913 intergenic not near genes chr2L_18_17340001 chr2L_17340001 RAL-373_125b 644 chr2L 17348314 17348364 chr2L 17348593 17348661 7 291 3.5 2.0 2.8 1.8 347 chr2L 17348314 intergenic not near genes chr2L 17348488 intergenic not near genes chr2L 17348661 intergenic not near genes chr2L_7_17345001 chr2L_17345001 RAL-373_125b 645 chr2L 17379667 17379702 chr2L 17379802 17379837 9 134 4.0 6.5 5.2 1.5 170 chr2L 17379667 intron Lrch - chr2L 17379752 intron Lrch - chr2L 17379837 intron Lrch - chr2L_9_17375001 chr2L_17375001 RAL-373_125b 646 chr2L 17419258 17419280 chr2L 17419379 17419406 5 125 9.5 4.0 6.8 0.6 148 chr2L 17419258 intron Dif - chr2L 17419332 intron Dif - chr2L 17419406 intron Dif - chr2L_5_17415001 chr2L_17415001 RAL-373_125b 647 chr2L 17432008 17432018 chr2L 17432165 17432175 1360 4 154 0.0 7.5 3.8 0.8 167 chr2L 17432008 intron Dif - chr2L 17432092 intron Dif - chr2L 17432175 intron Dif - chr2L_4_17430001 chr2L_17430001 RAL-373_125b 648 chr2L 17572076 17572140 chr2L 17572235 17572299 16 158 5.0 3.5 4.2 3.1 223 chr2L 17572076 intergenic not near genes chr2L 17572188 intergenic not near genes chr2L 17572299 intergenic not near genes chr2L_16_17570001 chr2L_17570001 RAL-373_125b 649 chr2L 17573209 17573264 chr2L 17573352 17573401 8 142 9.0 5.5 7.2 1.0 192 chr2L 17573209 intergenic not near genes chr2L 17573305 intergenic not near genes chr2L 17573401 intergenic not near genes chr2L_8_17570001 chr2L_17570001 RAL-373_125b 650 chr2L 17576309 17576370 chr2L 17578162 17578223 18 1856 42.5 37.5 40.0 0.4 1914 chr2L 17576309 intergenic not near genes chr2L 17577266 intergenic not near genes chr2L 17578223 intergenic not near genes chr2L_18_17575001 chr2L_17575001 RAL-373_125b 651 chr2L 17607441 17607482 chr2L 17607579 17607630 5 146 6.5 0.5 3.5 1.1 189 chr2L 17607441 intergenic CR44412 - chr2L 17607536 intergenic CR44412 - chr2L 17607630 intergenic CR44412 - chr2L_5_17605001 chr2L_17605001 RAL-373_125b 652 chr2L 17623335 17623388 chr2L 17623463 17623519 17 129 1.5 7.0 4.2 3.3 184 chr2L 17623335 intergenic not near genes chr2L 17623427 intergenic not near genes chr2L 17623519 intergenic not near genes chr2L_17_17620001 chr2L_17620001 RAL-373_125b 653 chr2L 17687473 17687520 chr2L 17692268 17692315 F-element 17 4794 3.5 5.5 4.5 3.1 4842 chr2L 17687473 intron CadN - chr2L 17689894 intron CadN - chr2L 17692315 intron CadN - chr2L_17_17685001 chr2L_17685001 RAL-373_125b 654 chr2L 17723749 17723802 chr2L 17723887 17723945 25 139 2.0 3.5 2.8 6.6 196 chr2L 17723749 intron CadN - chr2L 17723847 intron CadN - chr2L 17723945 intron CadN - chr2L_25_17720001 chr2L_17720001 RAL-373_125b 655 chr2L 17727822 17727860 chr2L 17729339 17729357 hobo 8 1510 6.0 7.0 6.5 1.1 1535 chr2L 17727822 intron CadN - chr2L 17728590 intron CadN - chr2L 17729357 intron CadN - chr2L_8_17725001 chr2L_17725001 RAL-373_125b 656 chr2L 17747965 17748022 chr2L 17748092 17748149 10 125 7.0 6.5 6.8 1.3 184 chr2L 17747965 intron CadN - chr2L 17748057 intron CadN - chr2L 17748149 intron CadN - chr2L_10_17745001 chr2L_17745001 RAL-373_125b 657 chr2L 17819876 17819945 chr2L 17825129 17825198 copia 19 5249 6.5 4.0 5.2 3.1 5322 chr2L 17819876 intron CadN2 - chr2L 17822537 intron CadN2 - chr2L 17825198 intron CadN2 - chr2L_19_17820001 chr2L_17820001 RAL-373_125b 658 chr2L 17842581 17842641 chr2L 17842716 17842776 17 134 4.0 3.5 3.8 3.5 195 chr2L 17842581 intron CadN2 - chr2L 17842678 intron CadN2 - chr2L 17842776 intron CadN2 - chr2L_17_17840001 chr2L_17840001 RAL-373_125b 659 chr2L 17863603 17863630 chr2L 17863803 17863835 4 202 3.0 5.5 4.2 0.8 232 chr2L 17863603 intron CadN2 - chr2L 17863719 intron CadN2 - chr2L 17863835 intron CadN2 - chr2L_4_17860001 chr2L_17860001 RAL-373_125b 660 chr2L 17867866 17867913 chr2L 17868034 17868098 15 188 2.5 4.5 3.5 3.3 232 chr2L 17867866 intron CadN2 - chr2L 17867982 intron CadN2 - chr2L 17868098 intron CadN2 - chr2L_15_17865001 chr2L_17865001 RAL-373_125b 661 chr2L 17906734 17906785 chr2L 17906842 17906918 13 129 1.0 3.5 2.2 4.1 184 chr2L 17906734 intergenic not near genes chr2L 17906826 intergenic not near genes chr2L 17906918 intergenic not near genes chr2L_13_17905001 chr2L_17905001 RAL-373_125b 662 chr2L 17911927 17911983 chr2L 17914145 17914206 pogo 10 2224 4.0 6.0 5.0 1.7 2279 chr2L 17911927 intergenic not near genes chr2L 17913066 intergenic not near genes chr2L 17914206 intergenic CG43271 - chr2L_10_17910001 chr2L_17910001 RAL-373_125b 663 chr2L 17943555 17943623 chr2L 17943681 17943749 14 126 9.0 8.0 8.5 1.5 194 chr2L 17943555 intergenic not near genes chr2L 17943652 intergenic not near genes chr2L 17943749 intergenic not near genes chr2L_14_17940001 chr2L_17940001 RAL-373_125b 664 chr2L 17951899 17951973 chr2L 17953416 17953490 hobo 29 1515 6.5 7.5 7.0 3.6 1591 chr2L 17951899 intergenic CR44398 -,CR44397 - chr2L 17952694 intergenic not near genes chr2L 17953490 intergenic not near genes chr2L_29_17950001 chr2L_17950001 RAL-373_125b 665 chr2L 18051836 18051895 chr2L 18061033 18061085 roo 15 9195 8.0 4.5 6.2 2.1 9249 chr2L 18051836 intron rdo + chr2L 18056460 intron rdo + chr2L 18061085 intron rdo + chr2L_15_18055001 chr2L_18055001 RAL-373_125b 666 chr2L 18078248 18078269 chr2L 18078384 18078394 10 132 10.5 12.0 11.2 0.8 146 chr2L 18078248 intergenic Arr1 + chr2L 18078321 5` UTR Arr1 + chr2L 18078394 exon Arr1 + chr2L_10_18075001 chr2L_18075001 RAL-373_125b 667 chr2L 18078272 18078303 chr2L 18078383 18078434 8 130 4.0 12.0 8.0 0.9 162 chr2L 18078272 5` UTR Arr1 + chr2L 18078353 5` UTR Arr1 + chr2L 18078434 exon Arr1 + chr2L_8_18075001 chr2L_18075001 RAL-373_125b 668 chr2L 18079768 18079775 chr2L 18079904 18079911 5 136 12.0 4.0 8.0 0.6 143 chr2L 18079768 intron Arr1 + chr2L 18079840 intron Arr1 + chr2L 18079911 intron Arr1 + chr2L_5_18075001 chr2L_18075001 RAL-373_125b 669 chr2L 18079780 18079835 chr2L 18079903 18079971 10 132 5.0 4.0 4.5 1.8 191 chr2L 18079780 intron Arr1 + chr2L 18079876 intron Arr1 + chr2L 18079971 exon Arr1 + chr2L_10_18075001 chr2L_18075001 RAL-373_125b 670 chr2L 18107748 18107812 chr2L 18107867 18107936 12 122 5.5 7.5 6.5 1.6 188 chr2L 18107748 intergenic not near genes chr2L 18107842 intergenic not near genes chr2L 18107936 intergenic not near genes chr2L_12_18105001 chr2L_18105001 RAL-373_125b 671 chr2L 18184983 18185025 chr2L 18185148 18185190 7 165 2.5 5.0 3.8 1.5 207 chr2L 18184983 intron,5` UTR CG42750 -,CG7180 - chr2L 18185086 intron CG42750 - chr2L 18185190 intron,3` UTR CG42750 -,CR44900 - chr2L_7_18185001 chr2L_18185001 RAL-373_125b 672 chr2L 18235047 18235087 chr2L 18235208 18235269 10 171 8.0 10.0 9.0 1.0 222 chr2L 18235047 intron CG42750 - chr2L 18235158 intron CG42750 - chr2L 18235269 intron CG42750 - chr2L_10_18235001 chr2L_18235001 RAL-373_125b 673 chr2L 18255448 18255515 chr2L 18255568 18255635 24 130 4.0 5.5 4.8 4.1 187 chr2L 18255448 intron CG42750 - chr2L 18255542 intron CG42750 - chr2L 18255635 intron CG42750 - chr2L_24_18255001 chr2L_18255001 RAL-373_125b 674 chr2L 18274001 18274074 chr2L 18274126 18274175 16 130 3.0 6.5 4.8 2.8 174 chr2L 18274001 intron CG42750 - chr2L 18274088 intron CG42750 - chr2L 18274175 intron CG42750 - chr2L_16_18270001 chr2L_18270001 RAL-373_125b 675 chr2L 18286371 18286430 chr2L 18286514 18286573 9 140 2.5 6.0 4.2 1.7 202 chr2L 18286371 intergenic not near genes chr2L 18286472 intergenic not near genes chr2L 18286573 intergenic not near genes chr2L_9_18285001 chr2L_18285001 RAL-373_125b 676 chr2L 18291490 18291512 chr2L 18291638 18291660 11 148 7.0 0.0 3.5 2.4 170 chr2L 18291490 intergenic CG43362 -,CR44693 +,CR44696 - chr2L 18291575 intergenic CR44693 +,CG43362 -,CR44696 - chr2L 18291660 intergenic CR44693 +,CG43362 -,CR44696 - chr2L_11_18290001 chr2L_18290001 RAL-373_125b 677 chr2L 18334545 18334600 chr2L 18334659 18334715 8 118 4.5 5.5 5.0 1.3 170 chr2L 18334545 intron Fas3 + chr2L 18334630 intron Fas3 + chr2L 18334715 intron Fas3 + chr2L_8_18330001 chr2L_18330001 RAL-373_125b 678 chr2L 18407984 18408047 chr2L 18412818 18412889 Doc 17 4834 5.0 0.0 2.5 4.9 4905 chr2L 18407984 intergenic not near genes chr2L 18410436 intergenic not near genes chr2L 18412889 intergenic not near genes chr2L_17_18410001 chr2L_18410001 RAL-373_125b 679 chr2L 18443815 18443836 chr2L 18443945 18443966 4 130 6.0 0.0 3.0 1.0 151 chr2L 18443815 intergenic not near genes chr2L 18443890 intergenic not near genes chr2L 18443966 intergenic not near genes chr2L_4_18440001 chr2L_18440001 RAL-373_125b 680 chr2L 18462311 18462479 chr2L 18462472 18462607 10 155 0.0 0.0 0.0 10.0 296 chr2L 18462311 intron let-7-C + chr2L 18462459 intron let-7-C + chr2L 18462607 intron let-7-C + chr2L_10_18460001 chr2L_18460001 RAL-373_125b 681 chr2L 18484849 18484908 chr2L 18485032 18485091 17 182 6.0 6.5 6.2 2.4 242 chr2L 18484849 intergenic CG10283 - chr2L 18484970 intergenic CG10176 +,CG10283 - chr2L 18485091 intergenic CG10176 + chr2L_17_18480001 chr2L_18480001 RAL-373_125b 682 chr2L 18538548 18538594 chr2L 18538667 18538725 15 130 0.5 7.0 3.8 3.1 177 chr2L 18538548 intron Pde11 - chr2L 18538636 intron Pde11 - chr2L 18538725 intron Pde11 - chr2L_15_18535001 chr2L_18535001 RAL-373_125b 683 chr2L 18552024 18552056 chr2L 18552145 18552194 13 136 9.0 8.5 8.8 1.3 170 chr2L 18552024 intron Pde11 - chr2L 18552109 intron Pde11 - chr2L 18552194 intron Pde11 - chr2L_13_18550001 chr2L_18550001 RAL-373_125b 684 chr2L 18572140 18572192 chr2L 18572272 18572277 13 119 5.0 3.0 4.0 2.6 137 chr2L 18572140 intron Pde11 - chr2L 18572208 intron Pde11 - chr2L 18572277 intron Pde11 - chr2L_13_18570001 chr2L_18570001 RAL-373_125b 685 chr2L 18628031 18628097 chr2L 18628282 18628348 17 246 3.0 5.5 4.2 3.3 317 chr2L 18628031 intron MESR3 + chr2L 18628190 intron MESR3 + chr2L 18628348 intron MESR3 + chr2L_17_18625001 chr2L_18625001 RAL-373_125b 686 chr2L 18767613 18767665 chr2L 18767721 18767794 12 125 9.0 9.0 9.0 1.2 181 chr2L 18767613 intron ham - chr2L 18767704 intron ham - chr2L 18767794 intron ham - chr2L_12_18765001 chr2L_18765001 RAL-373_125b 687 chr2L 18792025 18792092 chr2L 18792167 18792234 27 141 8.0 5.0 6.5 3.6 209 chr2L 18792025 intron ham - chr2L 18792130 intron ham - chr2L 18792234 intron ham - chr2L_27_18790001 chr2L_18790001 RAL-373_125b 688 chr2L 18811369 18811428 chr2L 18811501 18811555 12 131 4.0 1.5 2.8 3.2 186 chr2L 18811369 intergenic CG10570 -,CG42502 - chr2L 18811462 intergenic CG10570 -,CG42502 - chr2L 18811555 intergenic not near genes chr2L_12_18810001 chr2L_18810001 RAL-373_125b 689 chr2L 18811622 18811688 chr2L 18811878 18811947 17 256 2.0 3.5 2.8 4.5 325 chr2L 18811622 intergenic not near genes chr2L 18811784 intergenic not near genes chr2L 18811947 intergenic not near genes chr2L_17_18810001 chr2L_18810001 RAL-373_125b 690 chr2L 18812521 18812590 chr2L 18812834 18812892 18 309 0.0 9.5 4.8 3.1 371 chr2L 18812521 intergenic CG17325 +,CG42305 + chr2L 18812706 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812892 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_18_18810001 chr2L_18810001 RAL-373_125b 691 chr2L 18824354 18824371 chr2L 18827212 18827231 5 2851 31.5 41.5 36.5 0.1 2877 chr2L 18824354 exon CG17323 + chr2L 18825792 exon CG17323 + chr2L 18827231 exon CG17322 + chr2L_5_18825001 chr2L_18825001 RAL-373_125b 692 chr2L 18824353 18824398 chr2L 18827235 18827271 10 2856 34.0 38.5 36.2 0.3 2918 chr2L 18824353 exon CG17323 + chr2L 18825812 exon CG17323 + chr2L 18827271 intron CG17322 + chr2L_10_18825001 chr2L_18825001 RAL-373_125b 693 chr2L 18847849 18847926 chr2L 18848310 18848365 17 450 1.5 7.0 4.2 3.3 516 chr2L 18847849 intron CG17321 + chr2L 18848107 intron CG17321 + chr2L 18848365 intron CG17321 + chr2L_17_18845001 chr2L_18845001 RAL-373_125b 694 chr2L 18902573 18902640 chr2L 18902904 18902971 12 329 5.0 2.5 3.8 2.5 398 chr2L 18902573 intergenic not near genes chr2L 18902772 intergenic not near genes chr2L 18902971 intergenic not near genes chr2L_12_18900001 chr2L_18900001 RAL-373_125b 695 chr2L 18917600 18917673 chr2L 18917730 18917746 17 126 7.5 7.5 7.5 2.0 146 chr2L 18917600 intron ssp3 - chr2L 18917673 intron ssp3 - chr2L 18917746 intron ssp3 - chr2L_17_18915001 chr2L_18915001 RAL-373_125b 696 chr2L 18926529 18926582 chr2L 18926685 18926729 6 154 4.0 4.5 4.2 1.2 200 chr2L 18926529 intron ssp3 - chr2L 18926629 intron ssp3 - chr2L 18926729 intron ssp3 - chr2L_6_18925001 chr2L_18925001 RAL-373_125b 697 chr2L 18981707 18981778 chr2L 18981834 18981905 11 119 5.5 6.0 5.8 1.6 198 chr2L 18981707 intron Swip-1 - chr2L 18981806 intron Swip-1 - chr2L 18981905 intron Swip-1 - chr2L_11_18980001 chr2L_18980001 RAL-373_125b 698 chr2L 19120997 19121070 chr2L 19121120 19121199 18 126 5.0 3.5 4.2 3.5 202 chr2L 19120997 intergenic l(2)37Cc - chr2L 19121098 intergenic l(2)37Cc - chr2L 19121199 intergenic l(2)37Cc - chr2L_18_19120001 chr2L_19120001 RAL-373_125b 699 chr2L 19121521 19121560 chr2L 19121637 19121678 6 121 6.0 13.0 9.5 0.6 157 chr2L 19121521 3` UTR l(2)37Cc - chr2L 19121600 3` UTR l(2)37Cc - chr2L 19121678 3` UTR l(2)37Cc - chr2L_6_19120001 chr2L_19120001 RAL-373_125b 700 chr2L 19145143 19145188 chr2L 19145278 19145291 6 123 6.5 7.0 6.8 0.8 148 chr2L 19145143 intron brat + chr2L 19145217 intron brat + chr2L 19145291 intron brat + chr2L_6_19145001 chr2L_19145001 RAL-373_125b 701 chr2L 19147256 19147391 chr2L 19154403 19154476 297 17 7129 0.0 6.0 3.0 4.2 7220 chr2L 19147256 intron brat + chr2L 19150866 intron brat + chr2L 19154476 intron brat + chr2L_17_19150001 chr2L_19150001 RAL-373_125b 702 chr2L 19189940 19189970 chr2L 19190144 19190174 5 202 4.0 11.5 7.8 0.6 234 chr2L 19189940 intergenic pigeon +,drl + chr2L 19190057 intergenic pigeon +,drl + chr2L 19190174 intergenic drl +,pigeon + chr2L_5_19190001 chr2L_19190001 RAL-373_125b 703 chr2L 19199630 19199694 chr2L 19199757 19199819 13 120 6.5 11.5 9.0 1.3 189 chr2L 19199630 intron drl + chr2L 19199724 intron drl + chr2L 19199819 intron drl + chr2L_13_19195001 chr2L_19195001 RAL-373_125b 704 chr2L 19209576 19209645 chr2L 19209711 19209780 12 133 2.5 3.0 2.8 3.2 204 chr2L 19209576 intergenic not near genes chr2L 19209678 intergenic not near genes chr2L 19209780 intergenic not near genes chr2L_12_19205001 chr2L_19205001 RAL-373_125b 705 chr2L 19227035 19227094 chr2L 19227176 19227223 17 139 9.5 7.5 8.5 1.8 188 chr2L 19227035 intergenic not near genes chr2L 19227129 intergenic not near genes chr2L 19227223 intergenic not near genes chr2L_17_19225001 chr2L_19225001 RAL-373_125b 706 chr2L 19231584 19231643 chr2L 19231872 19231944 7 297 5.0 4.5 4.8 1.2 360 chr2L 19231584 intergenic not near genes chr2L 19231764 intergenic not near genes chr2L 19231944 intergenic not near genes chr2L_7_19230001 chr2L_19230001 RAL-373_125b 707 chr2L 19241052 19241088 chr2L 19241165 19241216 12 126 7.0 9.0 8.0 1.3 164 chr2L 19241052 intergenic not near genes chr2L 19241134 intergenic not near genes chr2L 19241216 intergenic not near genes chr2L_12_19240001 chr2L_19240001 RAL-373_125b 708 chr2L 19288606 19288673 chr2L 19288735 19288802 11 123 2.0 8.0 5.0 1.8 196 chr2L 19288606 intergenic not near genes chr2L 19288704 intergenic not near genes chr2L 19288802 intergenic not near genes chr2L_11_19285001 chr2L_19285001 RAL-373_125b 709 chr2L 19309578 19309645 chr2L 19309708 19309730 18 123 7.5 5.5 6.5 2.4 152 chr2L 19309578 intergenic not near genes chr2L 19309654 intergenic not near genes chr2L 19309730 intergenic not near genes chr2L_18_19305001 chr2L_19305001 RAL-373_125b 710 chr2L 19316166 19316225 chr2L 19316283 19316341 11 123 3.5 0.0 1.8 3.9 175 chr2L 19316166 intergenic not near genes chr2L 19316254 intergenic not near genes chr2L 19316341 intergenic not near genes chr2L_11_19315001 chr2L_19315001 RAL-373_125b 711 chr2L 19345003 19345033 chr2L 19357227 19357287 blood 13 12249 8.5 4.5 6.5 1.7 12284 chr2L 19345003 intron dnt - chr2L 19351145 intron dnt - chr2L 19357287 intron dnt - chr2L_13_19350001 chr2L_19350001 RAL-373_125b 712 chr2L 19357512 19357562 chr2L 19357652 19357702 14 136 10.5 11.5 11.0 1.2 190 chr2L 19357512 intron dnt - chr2L 19357607 intron dnt - chr2L 19357702 intron dnt - chr2L_14_19355001 chr2L_19355001 RAL-373_125b 713 chr2L 19361664 19361725 chr2L 19361801 19361862 16 135 5.5 6.5 6.0 2.3 198 chr2L 19361664 intron dnt - chr2L 19361763 intron dnt - chr2L 19361862 intron dnt - chr2L_16_19360001 chr2L_19360001 RAL-373_125b 714 chr2L 19374452 19374500 chr2L 19374611 19374659 12 158 10.0 6.0 8.0 1.3 207 chr2L 19374452 intergenic not near genes chr2L 19374556 intergenic not near genes chr2L 19374659 intergenic not near genes chr2L_12_19370001 chr2L_19370001 RAL-373_125b 715 chr2L 19376776 19376846 chr2L 19376902 19376950 11 116 6.0 4.5 5.2 1.8 174 chr2L 19376776 intergenic not near genes chr2L 19376863 intergenic not near genes chr2L 19376950 intergenic not near genes chr2L_11_19375001 chr2L_19375001 RAL-373_125b 716 chr2L 19382607 19382631 chr2L 19382712 19382731 6 108 10.0 9.5 9.8 0.6 124 chr2L 19382607 exon CG17350 + chr2L 19382669 exon CG17350 + chr2L 19382731 exon CG17350 + chr2L_6_19380001 chr2L_19380001 RAL-373_125b 717 chr2L 19405314 19405327 chr2L 19405494 19405507 6 180 8.5 3.0 5.8 0.9 193 chr2L 19405314 intron Pax - chr2L 19405410 intron Pax - chr2L 19405507 intron Pax - chr2L_6_19405001 chr2L_19405001 RAL-373_125b 718 chr2L 19405328 19405619 chr2L 19405503 19405757 20 160 5.5 4.0 4.8 3.4 429 chr2L 19405328 intron Pax - chr2L 19405542 intron Pax - chr2L 19405757 intron Pax - chr2L_20_19405001 chr2L_19405001 RAL-373_125b 719 chr2L 19412224 19412275 chr2L 19412363 19412416 14 140 3.0 3.5 3.2 3.3 192 chr2L 19412224 intron Pax - chr2L 19412320 intron Pax - chr2L 19412416 intron Pax - chr2L_14_19410001 chr2L_19410001 RAL-373_125b 720 chr2L 19420767 19420828 chr2L 19421284 19421345 17 524 7.0 7.5 7.2 2.1 578 chr2L 19420767 intron Pax - chr2L 19421056 intron Pax - chr2L 19421345 intron Pax - chr2L_17_19420001 chr2L_19420001 RAL-373_125b 721 chr2L 19437471 19437531 chr2L 19437613 19437673 21 141 5.0 6.0 5.5 3.2 202 chr2L 19437471 intron CG10237 - chr2L 19437572 intron CG10237 - chr2L 19437673 exon CG10237 - chr2L_21_19435001 chr2L_19435001 RAL-373_125b 722 chr2L 19441018 19441087 chr2L 19441145 19441209 22 124 10.0 7.5 8.8 2.2 191 chr2L 19441018 intron CG10237 - chr2L 19441114 intron CG10237 - chr2L 19441209 5` UTR CG10237 - chr2L_22_19440001 chr2L_19440001 RAL-373_125b 723 chr2L 19544559 19544571 chr2L 19544676 19544698 5 119 14.0 8.0 11.0 0.4 139 chr2L 19544559 exon ref(2)P + chr2L 19544628 exon ref(2)P + chr2L 19544698 exon ref(2)P + chr2L_5_19540001 chr2L_19540001 RAL-373_125b 724 chr2L 19557785 19557823 chr2L 19557921 19557959 6 131 5.5 0.5 3.0 1.5 174 chr2L 19557785 intergenic Tep5 + chr2L 19557872 intergenic Tep5 + chr2L 19557959 intergenic Tep5 + chr2L_6_19555001 chr2L_19555001 RAL-373_125b 725 chr2L 19558491 19558541 chr2L 19558645 19558695 15 151 0.0 8.0 4.0 3.0 204 chr2L 19558491 intron Tep5 + chr2L 19558593 intron Tep5 + chr2L 19558695 intron Tep5 + chr2L_15_19555001 chr2L_19555001 RAL-373_125b 726 chr2L 19559953 19560038 chr2L 19560256 19560340 16 298 2.5 7.0 4.8 2.8 387 chr2L 19559953 exon Tep5 + chr2L 19560146 exon Tep5 + chr2L 19560340 intron Tep5 + chr2L_16_19560001 chr2L_19560001 RAL-373_125b 727 chr2L 19560797 19560864 chr2L 19560927 19561009 16 138 3.5 0.0 1.8 5.7 212 chr2L 19560797 exon Tep5 + chr2L 19560903 exon Tep5 + chr2L 19561009 exon Tep5 + chr2L_16_19560001 chr2L_19560001 RAL-373_125b 728 chr2L 19561291 19561365 chr2L 19561483 19561556 24 187 3.5 6.5 5.0 4.0 265 chr2L 19561291 exon Tep5 + chr2L 19561424 exon Tep5 + chr2L 19561556 exon Tep5 + chr2L_24_19560001 chr2L_19560001 RAL-373_125b 729 chr2L 19562007 19562022 chr2L 19562142 19562143 6 132 16.0 3.5 9.8 0.6 136 chr2L 19562007 exon Tep5 + chr2L 19562075 intron Tep5 + chr2L 19562143 exon Tep5 + chr2L_6_19560001 chr2L_19560001 RAL-373_125b 730 chr2L 19562026 19562079 chr2L 19562141 19562209 27 126 6.0 3.5 4.8 4.7 183 chr2L 19562026 exon Tep5 + chr2L 19562118 intron Tep5 + chr2L 19562209 exon Tep5 + chr2L_27_19560001 chr2L_19560001 RAL-373_125b 731 chr2L 19609603 19609673 chr2L 19609739 19609805 16 136 4.5 3.5 4.0 3.2 202 chr2L 19609603 intron Lar + chr2L 19609704 intron Lar + chr2L 19609805 intron Lar + chr2L_16_19605001 chr2L_19605001 RAL-373_125b 732 chr2L 19620056 19620128 chr2L 19621084 19621138 jockey 15 1028 8.0 5.0 6.5 2.0 1082 chr2L 19620056 intron Lar + chr2L 19620597 intron Lar + chr2L 19621138 intron Lar + chr2L_15_19620001 chr2L_19620001 RAL-373_125b 733 chr2L 19652533 19652592 chr2L 19674017 19674071 opus 10 21481 11.0 6.5 8.8 1.0 21538 chr2L 19652533 intron Lar + chr2L 19663302 intron Lar + chr2L 19674071 intron Lar + chr2L_10_19660001 chr2L_19660001 RAL-373_125b 734 chr2L 19697091 19697158 chr2L 19697234 19697291 14 140 6.5 7.0 6.8 1.8 200 chr2L 19697091 intron Lar + chr2L 19697191 intron Lar + chr2L 19697291 intron Lar + chr2L_14_19695001 chr2L_19695001 RAL-373_125b 735 chr2L 19703501 19703570 chr2L 19712687 19712787 roo 16 9187 7.5 0.5 4.0 3.2 9286 chr2L 19703501 intron Lar + chr2L 19708144 intron Lar + chr2L 19712787 intron Lar + chr2L_16_19705001 chr2L_19705001 RAL-373_125b 736 chr2L 19712682 19712692 chr2L 19712801 19712820 6 123 0.5 11.0 5.8 0.9 138 chr2L 19712682 intron Lar + chr2L 19712751 intron Lar + chr2L 19712820 intron Lar + chr2L_6_19710001 chr2L_19710001 RAL-373_125b 737 chr2L 19712695 19712706 chr2L 19712788 19712835 5 119 0.5 9.0 4.8 0.9 140 chr2L 19712695 intron Lar + chr2L 19712765 intron Lar + chr2L 19712835 intron Lar + chr2L_5_19710001 chr2L_19710001 RAL-373_125b 738 chr2L 19737356 19737367 chr2L 19740847 19740881 1360 8 3502 10.0 8.5 9.2 0.8 3525 chr2L 19737356 intergenic Nf-YB + chr2L 19739118 intergenic not near genes chr2L 19740881 intergenic not near genes chr2L_8_19735001 chr2L_19735001 RAL-373_125b 739 chr2L 19762782 19762831 chr2L 19763058 19763123 pogo 16 289 7.0 6.0 6.5 2.1 341 chr2L 19762782 exon fbp - chr2L 19762952 intron fbp - chr2L 19763123 intron fbp - chr2L_16_19760001 chr2L_19760001 RAL-373_125b 740 chr2L 19765071 19765140 chr2L 19765256 19765325 5 185 0.0 11.0 5.5 0.8 254 chr2L 19765071 intergenic not near genes chr2L 19765198 intergenic not near genes chr2L 19765325 intergenic bsh - chr2L_5_19765001 chr2L_19765001 RAL-373_125b 741 chr2L 19773120 19773191 chr2L 19773257 19773328 15 135 4.0 3.0 3.5 3.3 208 chr2L 19773120 intergenic not near genes chr2L 19773224 intergenic not near genes chr2L 19773328 intergenic not near genes chr2L_15_19770001 chr2L_19770001 RAL-373_125b 742 chr2L 19776624 19776659 chr2L 19776745 19776789 12 128 13.5 6.5 10.0 1.1 165 chr2L 19776624 3` UTR CdGAPr - chr2L 19776706 3` UTR CdGAPr - chr2L 19776789 3` UTR CdGAPr - chr2L_12_19775001 chr2L_19775001 RAL-373_125b 743 chr2L 19824374 19824418 chr2L 19824505 19824551 14 131 2.0 5.0 3.5 3.1 177 chr2L 19824374 intron sick + chr2L 19824462 intron sick + chr2L 19824551 intron sick + chr2L_14_19820001 chr2L_19820001 RAL-373_125b 744 chr2L 19837239 19837309 chr2L 19837363 19837423 18 126 6.5 8.0 7.2 2.2 184 chr2L 19837239 intron sick + chr2L 19837331 intron sick + chr2L 19837423 intron sick + chr2L_18_19835001 chr2L_19835001 RAL-373_125b 745 chr2L 19846235 19846275 chr2L 19846350 19846401 7 126 0.5 7.5 4.0 1.4 166 chr2L 19846235 intron sick + chr2L 19846318 intron sick + chr2L 19846401 intron sick + chr2L_7_19845001 chr2L_19845001 RAL-373_125b 746 chr2L 19994589 19994679 chr2L 19994736 19994791 11 129 1.0 4.5 2.8 2.9 202 chr2L 19994589 intron CG43861 - chr2L 19994690 intron CG43861 - chr2L 19994791 intron CG43861 - chr2L_11_19990001 chr2L_19990001 RAL-373_125b 747 chr2L 20005834 20005904 chr2L 20010960 20010994 flea 21 5120 5.0 9.5 7.2 2.6 5160 chr2L 20005834 intron CG43861 - chr2L 20008414 intron CG43861 - chr2L 20010994 intron CG43861 - chr2L_21_20005001 chr2L_20005001 RAL-373_125b 748 chr2L 20036487 20036548 chr2L 20036621 20036682 20 133 9.5 6.5 8.0 2.2 195 chr2L 20036487 intron sNPF + chr2L 20036584 intron sNPF + chr2L 20036682 intron sNPF + chr2L_20_20035001 chr2L_20035001 RAL-373_125b 749 chr2L 20046512 20046525 chr2L 20046651 20046659 4 138 16.5 5.5 11.0 0.3 147 chr2L 20046512 intron sNPF + chr2L 20046586 intron sNPF + chr2L 20046659 intron sNPF + chr2L_4_20045001 chr2L_20045001 RAL-373_125b 750 chr2L 20046527 20046586 chr2L 20046642 20046720 17 124 5.5 4.0 4.8 2.9 193 chr2L 20046527 intron sNPF + chr2L 20046624 intron sNPF + chr2L 20046720 intron sNPF + chr2L_17_20045001 chr2L_20045001 RAL-373_125b 751 chr2L 20064185 20064231 chr2L 20064321 20064368 13 136 3.5 6.5 5.0 2.2 183 chr2L 20064185 3` UTR lok + chr2L 20064276 3` UTR,3` UTR lok +,vls - chr2L 20064368 3` UTR,3` UTR lok +,vls - chr2L_13_20060001 chr2L_20060001 RAL-373_125b 752 chr2L 20079477 20079521 chr2L 20079644 20079687 16 168 8.5 4.0 6.2 2.2 210 chr2L 20079477 intron,intron neb +,fok - chr2L 20079582 intron,intron neb +,fok - chr2L 20079687 intron,intron neb +,fok - chr2L_16_20075001 chr2L_20075001 RAL-373_125b 753 chr2L 20272088 20272134 chr2L 20282829 20282895 copia 18 10758 6.0 9.0 7.5 2.1 10807 chr2L 20272088 intergenic not near genes chr2L 20277492 intergenic not near genes chr2L 20282895 intergenic not near genes chr2L_18_20275001 chr2L_20275001 RAL-373_125b 754 chr2L 20296494 20296521 chr2L 20296619 20296630 10 128 0.0 7.0 3.5 2.2 136 chr2L 20296494 intergenic CR43414 - chr2L 20296562 intergenic CR43414 - chr2L 20296630 intergenic CR43414 - chr2L_10_20295001 chr2L_20295001 RAL-373_125b 755 chr2L 20302152 20302204 chr2L 20302281 20302322 9 125 11.0 5.5 8.2 1.0 170 chr2L 20302152 intergenic not near genes chr2L 20302237 intergenic not near genes chr2L 20302322 intergenic not near genes chr2L_9_20300001 chr2L_20300001 RAL-373_125b 756 chr2L 20303162 20303183 chr2L 20310674 20310701 blood 6 7514 0.0 13.5 6.8 0.8 7539 chr2L 20303162 intergenic not near genes chr2L 20306932 intergenic not near genes chr2L 20310701 intergenic not near genes chr2L_6_20305001 chr2L_20305001 RAL-373_125b 757 chr2L 20310835 20310916 chr2L 20310965 20311034 8 127 0.0 3.5 1.8 2.9 199 chr2L 20310835 intergenic spir + chr2L 20310934 intergenic spir + chr2L 20311034 intergenic spir + chr2L_8_20310001 chr2L_20310001 RAL-373_125b 758 chr2L 20372168 20372222 chr2L 20372468 20372522 pogo 11 298 8.0 6.5 7.2 1.3 354 chr2L 20372168 intergenic Ugt37a1 - chr2L 20372345 intergenic Ugt37a1 - chr2L 20372522 exon Ugt37a1 - chr2L_11_20370001 chr2L_20370001 RAL-373_125b 759 chr2L 20383236 20383304 chr2L 20383361 20383437 4 130 2.5 5.0 3.8 0.8 201 chr2L 20383236 intergenic not near genes chr2L 20383336 intergenic not near genes chr2L 20383437 intergenic not near genes chr2L_4_20380001 chr2L_20380001 RAL-373_125b 760 chr2L 20498641 20498703 chr2L 20498790 20498847 14 144 7.0 7.0 7.0 1.8 206 chr2L 20498641 intergenic not near genes chr2L 20498744 intergenic not near genes chr2L 20498847 intergenic not near genes chr2L_14_20495001 chr2L_20495001 RAL-373_125b 761 chr2L 20559382 20559452 chr2L 20559511 20559537 9 123 3.0 4.0 3.5 2.0 155 chr2L 20559382 intergenic not near genes chr2L 20559460 intergenic not near genes chr2L 20559537 intergenic not near genes chr2L_9_20555001 chr2L_20555001 RAL-373_125b 762 chr2L 20568049 20568106 chr2L 20568577 20568634 13 526 7.0 2.5 4.8 2.2 585 chr2L 20568049 intron CR45347 + chr2L 20568342 intron CR45347 + chr2L 20568634 intron CR45347 + chr2L_13_20565001 chr2L_20565001 RAL-373_125b 763 chr2L 20568611 20568680 chr2L 20569051 20569106 X-element 21 438 3.0 4.0 3.5 4.7 495 chr2L 20568611 intron CR45347 + chr2L 20568858 intron CR45347 + chr2L 20569106 intron CR45347 + chr2L_21_20565001 chr2L_20565001 RAL-373_125b 764 chr2L 20576175 20576246 chr2L 20583693 20583755 blood 24 7512 3.5 7.0 5.2 3.9 7580 chr2L 20576175 intergenic CR45347 + chr2L 20579965 intergenic not near genes chr2L 20583755 3` UTR CR44909 - chr2L_24_20575001 chr2L_20575001 RAL-373_125b 765 chr2L 20597041 20597109 chr2L 20597163 20597236 10 120 6.0 7.0 6.5 1.3 195 chr2L 20597041 intron CR44909 - chr2L 20597138 intron CR44909 - chr2L 20597236 intron CR44909 - chr2L_10_20595001 chr2L_20595001 RAL-373_125b 766 chr2L 20601747 20601808 chr2L 20601869 20601936 20 127 5.0 1.5 3.2 4.8 189 chr2L 20601747 intron CR44909 - chr2L 20601842 intron CR44909 - chr2L 20601936 intron CR44909 - chr2L_20_20600001 chr2L_20600001 RAL-373_125b 767 chr2L 20602674 20602745 chr2L 20602808 20602877 12 137 0.0 3.5 1.8 4.3 203 chr2L 20602674 intron CR44909 - chr2L 20602776 intron CR44909 - chr2L 20602877 intron CR44909 - chr2L_12_20600001 chr2L_20600001 RAL-373_125b 768 chr2L 20611238 20611261 chr2L 20611367 20611377 6 125 1.5 6.5 4.0 1.2 139 chr2L 20611238 intron CR44909 - chr2L 20611308 intron CR44909 - chr2L 20611377 intron CR44909 - chr2L_6_20610001 chr2L_20610001 RAL-373_125b 769 chr2L 20668649 20668705 chr2L 20668765 20668831 13 121 8.0 7.0 7.5 1.5 182 chr2L 20668649 intron CG31678 - chr2L 20668740 intron CG31678 - chr2L 20668831 intron CG31678 - chr2L_13_20665001 chr2L_20665001 RAL-373_125b 770 chr2L 20674784 20674846 chr2L 20674919 20674974 6 128 4.0 0.5 2.2 1.9 190 chr2L 20674784 intron CG31678 - chr2L 20674879 intron CG31678 - chr2L 20674974 intron CG31678 - chr2L_6_20670001 chr2L_20670001 RAL-373_125b 771 chr2L 20700082 20700132 chr2L 20700360 20700405 15 277 5.5 8.5 7.0 1.9 323 chr2L 20700082 intron Hr38 - chr2L 20700244 intron Hr38 - chr2L 20700405 intron Hr38 - chr2L_15_20700001 chr2L_20700001 RAL-373_125b 772 chr2L 20708738 20708802 chr2L 20708968 20709037 17 233 4.0 6.0 5.0 2.8 299 chr2L 20708738 intron Hr38 - chr2L 20708888 intron Hr38 - chr2L 20709037 intron Hr38 - chr2L_17_20705001 chr2L_20705001 RAL-373_125b 773 chr2L 20819075 20819137 chr2L 20819202 20819271 18 132 2.0 9.0 5.5 2.8 196 chr2L 20819075 intergenic not near genes chr2L 20819173 intergenic not near genes chr2L 20819271 intergenic not near genes chr2L_18_20815001 chr2L_20815001 RAL-373_125b 774 chr2L 20821448 20821520 chr2L 20821658 20821719 16 204 3.5 7.5 5.5 2.5 271 chr2L 20821448 intergenic not near genes chr2L 20821584 intergenic not near genes chr2L 20821719 intergenic not near genes chr2L_16_20820001 chr2L_20820001 RAL-373_125b 775 chr2L 20829537 20829551 chr2L 20829670 20829678 5 131 8.0 7.5 7.8 0.6 141 chr2L 20829537 intergenic CG31673 + chr2L 20829608 5` UTR CG31673 + chr2L 20829678 exon CG31673 + chr2L_5_20825001 chr2L_20825001 RAL-373_125b 776 chr2L 20829557 20829599 chr2L 20829668 20829728 15 130 4.0 7.0 5.5 2.3 171 chr2L 20829557 intergenic CG31673 + chr2L 20829642 5` UTR CG31673 + chr2L 20829728 exon CG31673 + chr2L_15_20825001 chr2L_20825001 RAL-373_125b 777 chr2L 20835763 20835828 chr2L 20836530 20836595 Quasimodo 13 763 4.0 4.0 4.0 2.6 832 chr2L 20835763 5` UTR Oseg5 - chr2L 20836179 intergenic Oseg5 -,Spn38F - chr2L 20836595 intergenic Spn38F - chr2L_13_20835001 chr2L_20835001 RAL-373_125b 778 chr2L 20852252 20852434 chr2L 20852371 20852555 31 118 2.5 1.5 2.0 10.3 303 chr2L 20852252 intergenic twit + chr2L 20852404 intergenic twit + chr2L 20852555 intergenic twit + chr2L_31_20850001 chr2L_20850001 RAL-373_125b 779 chr2L 20891493 20891532 chr2L 20896639 20896675 jockey 8 5148 4.0 7.5 5.8 1.2 5182 chr2L 20891493 intron,intron CG43739 -,sky - chr2L 20894084 intron,intron CG43739 -,sky - chr2L 20896675 intron,intron CG43739 -,sky - chr2L_8_20890001 chr2L_20890001 RAL-373_125b 780 chr2L 20936961 20937041 chr2L 20937128 20937155 14 146 3.0 10.5 6.8 1.8 194 chr2L 20936961 intergenic not near genes chr2L 20937058 intergenic not near genes chr2L 20937155 intergenic not near genes chr2L_14_20935001 chr2L_20935001 RAL-373_125b 781 chr2L 20946897 20946961 chr2L 20947031 20947085 14 122 3.5 8.0 5.8 2.1 188 chr2L 20946897 intergenic CR44606 - chr2L 20946991 intergenic CR44606 - chr2L 20947085 intergenic CR44606 - chr2L_14_20945001 chr2L_20945001 RAL-373_125b 782 chr2L 20967039 20967106 chr2L 20967170 20967242 15 133 4.5 5.5 5.0 2.5 203 chr2L 20967039 3` UTR CG42238 - chr2L 20967140 3` UTR CG42238 - chr2L 20967242 3` UTR CG42238 - chr2L_15_20965001 chr2L_20965001 RAL-373_125b 783 chr2L 20976621 20976660 chr2L 20981476 20981525 X-element 8 4862 4.0 8.0 6.0 1.1 4904 chr2L 20976621 intron CG42238 - chr2L 20979073 intron CG42238 - chr2L 20981525 intron CG42238 - chr2L_8_20975001 chr2L_20975001 RAL-373_125b 784 chr2L 20990994 20991008 chr2L 20991122 20991136 6 127 12.0 8.5 10.2 0.5 142 chr2L 20990994 intron CG42238 - chr2L 20991065 intron CG42238 - chr2L 20991136 intron CG42238 - chr2L_6_20990001 chr2L_20990001 RAL-373_125b 785 chr2L 20991016 20991060 chr2L 20991114 20991188 14 120 6.0 9.0 7.5 1.6 172 chr2L 20991016 intron CG42238 - chr2L 20991102 intron CG42238 - chr2L 20991188 intron CG42238 - chr2L_14_20990001 chr2L_20990001 RAL-373_125b 786 chr2L 21001468 21001547 chr2L 21001603 21001676 18 121 6.0 5.5 5.8 2.6 208 chr2L 21001468 intron CG42238 - chr2L 21001572 intron CG42238 - chr2L 21001676 intron CG42238 - chr2L_18_21000001 chr2L_21000001 RAL-373_125b 787 chr2L 21020235 21020306 chr2L 21023962 21024018 NOF 14 3721 8.0 3.0 5.5 2.2 3783 chr2L 21020235 intron CG42238 - chr2L 21022126 intron CG42238 - chr2L 21024018 intron CG42238 - chr2L_14_21020001 chr2L_21020001 RAL-373_125b 788 chr2L 21041107 21041161 chr2L 21049418 21049467 Tirant 15 8309 4.5 7.0 5.8 2.2 8360 chr2L 21041107 intron CG42238 - chr2L 21045287 intron CG42238 - chr2L 21049467 intron CG42238 - chr2L_15_21045001 chr2L_21045001 RAL-373_125b 789 chr2L 21199179 21199249 chr2L 21199306 21199371 19 124 6.0 5.0 5.5 2.9 192 chr2L 21199179 intergenic CG31624 -,Ret - chr2L 21199275 3` UTR CG31624 - chr2L 21199371 3` UTR CG31624 - chr2L_19_21195001 chr2L_21195001 RAL-373_125b 790 chr2L 21218941 21219006 chr2L 21219265 21219328 15 323 7.0 9.0 8.0 1.7 387 chr2L 21218941 intron Atg18b - chr2L 21219134 intron Atg18b - chr2L 21219328 intron Atg18b - chr2L_15_21215001 chr2L_21215001 RAL-373_125b 791 chr2L 21246459 21246540 chr2L 21246604 21246684 24 132 5.0 5.5 5.2 3.9 225 chr2L 21246459 intron Hr39 + chr2L 21246572 intron Hr39 + chr2L 21246684 intron Hr39 + chr2L_24_21245001 chr2L_21245001 RAL-373_125b 792 chr2L 21266977 21267034 chr2L 21267144 21267200 4 167 7.5 5.0 6.2 0.6 223 chr2L 21266977 intron CG8671 + chr2L 21267088 intron CG8671 + chr2L 21267200 intron CG8671 + chr2L_4_21265001 chr2L_21265001 RAL-373_125b 793 chr2L 21274225 21274262 chr2L 21274355 21274392 9 133 7.0 6.5 6.8 1.2 167 chr2L 21274225 exon CG8671 + chr2L 21274308 exon CG8671 + chr2L 21274392 exon CG8671 + chr2L_9_21270001 chr2L_21270001 RAL-373_125b 794 chr2L 21286569 21286588 chr2L 21286698 21286717 6 129 9.0 9.0 9.0 0.6 148 chr2L 21286569 exon Mio - chr2L 21286643 intron Mio - chr2L 21286717 intron Mio - chr2L_6_21285001 chr2L_21285001 RAL-373_125b 795 chr2L 21323376 21323431 chr2L 21323514 21323569 9 138 5.5 7.0 6.2 1.2 193 chr2L 21323376 intergenic not near genes chr2L 21323472 intergenic not near genes chr2L 21323569 intergenic not near genes chr2L_9_21320001 chr2L_21320001 RAL-373_125b 796 chr2L 21333105 21333139 chr2L 21333252 21333286 12 146 9.0 2.5 5.8 1.8 181 chr2L 21333105 intron dimm + chr2L 21333196 intron dimm + chr2L 21333286 intron dimm + chr2L_12_21330001 chr2L_21330001 RAL-373_125b 797 chr2L 21333580 21333590 chr2L 21333775 21333785 4 195 6.5 4.5 5.5 0.6 205 chr2L 21333580 intron dimm + chr2L 21333682 intron dimm + chr2L 21333785 intron dimm + chr2L_4_21330001 chr2L_21330001 RAL-373_125b 798 chr2L 21333592 21333643 chr2L 21333769 21333838 16 185 2.5 3.5 3.0 4.0 246 chr2L 21333592 intron dimm + chr2L 21333715 intron dimm + chr2L 21333838 intron dimm + chr2L_16_21330001 chr2L_21330001 RAL-373_125b 799 chr2L 21347519 21347572 chr2L 21355035 21355094 blood 13 7519 3.5 3.5 3.5 2.9 7575 chr2L 21347519 intron Tsp39D + chr2L 21351306 intron Tsp39D + chr2L 21355094 intron Tsp39D + chr2L_13_21350001 chr2L_21350001 RAL-373_125b 800 chr2L 21355568 21355630 chr2L 21355763 21355820 16 193 6.0 4.0 5.0 2.7 252 chr2L 21355568 exon Tsp39D + chr2L 21355694 intron Tsp39D + chr2L 21355820 intron Tsp39D + chr2L_16_21355001 chr2L_21355001 RAL-373_125b 801 chr2L 21653171 21653208 chr2L 21656505 21656562 invader4 18 3351 4.5 7.0 5.8 2.6 3391 chr2L 21653171 intergenic not near genes chr2L 21654866 intergenic not near genes chr2L 21656562 intergenic not near genes chr2L_18_21650001 chr2L_21650001 RAL-373_125b 802 chr2L 21665338 21665390 chr2L 21665450 21665513 13 127 5.0 3.0 4.0 2.6 175 chr2L 21665338 3` UTR CG2225 - chr2L 21665426 3` UTR CG2225 - chr2L 21665513 exon CG2225 - chr2L_13_21665001 chr2L_21665001 RAL-373_125b 803 chr2L 21684256 21684325 chr2L 21684569 21684638 21 312 4.0 4.0 4.0 4.2 382 chr2L 21684256 intron CG31619 + chr2L 21684447 intron CG31619 + chr2L 21684638 5` UTR CG31619 + chr2L_21_21680001 chr2L_21680001 RAL-373_125b 804 chr2L 21685753 21685811 chr2L 21685869 21685931 13 123 5.0 6.5 5.8 1.9 178 chr2L 21685753 intron CG31619 + chr2L 21685842 intron CG31619 + chr2L 21685931 intron CG31619 + chr2L_13_21685001 chr2L_21685001 RAL-373_125b 805 chr2L 21750053 21750124 chr2L 21750423 21750497 10 367 3.5 3.5 3.5 2.2 444 chr2L 21750053 intron step - chr2L 21750275 intron step - chr2L 21750497 intron step - chr2L_10_21750001 chr2L_21750001 RAL-373_125b 806 chr2L 21754620 21754686 chr2L 21754751 21754817 17 130 5.0 8.5 6.8 2.2 197 chr2L 21754620 intron step - chr2L 21754718 intron step - chr2L 21754817 intron step - chr2L_17_21750001 chr2L_21750001 RAL-373_125b 807 chr2L 21755454 21755518 chr2L 21755623 21755690 21 172 6.0 6.0 6.0 3.0 236 chr2L 21755454 intron step - chr2L 21755572 intron step - chr2L 21755690 intron step - chr2L_21_21755001 chr2L_21755001 RAL-373_125b 808 chr2L 21836353 21836417 chr2L 21836493 21836555 17 131 9.0 4.5 6.8 2.2 202 chr2L 21836353 3` UTR tsh + chr2L 21836454 3` UTR tsh + chr2L 21836555 3` UTR tsh + chr2L_17_21835001 chr2L_21835001 RAL-373_125b 809 chr2L 21882516 21882588 chr2L 21882664 21882735 6 146 4.5 5.0 4.8 1.0 219 chr2L 21882516 intergenic not near genes chr2L 21882626 intergenic not near genes chr2L 21882735 intergenic not near genes chr2L_6_21880001 chr2L_21880001 RAL-373_125b 810 chr2L 21896382 21896448 chr2L 21896515 21896567 14 130 5.5 5.5 5.5 2.2 185 chr2L 21896382 intergenic CG11629 - chr2L 21896474 intergenic CG11629 - chr2L 21896567 intergenic CG11629 - chr2L_14_21895001 chr2L_21895001 RAL-373_125b 811 chr2L 21953795 21953856 chr2L 21954646 21954717 25 855 34.5 50.0 42.2 0.6 922 chr2L 21953795 intergenic not near genes chr2L 21954256 intergenic not near genes chr2L 21954717 intergenic not near genes chr2L_25_21950001 chr2L_21950001 RAL-373_125b 812 chr2L 21962554 21962572 chr2L 21962692 21962710 6 137 8.0 12.5 10.2 0.5 156 chr2L 21962554 intergenic not near genes chr2L 21962632 intergenic not near genes chr2L 21962710 intergenic not near genes chr2L_6_21960001 chr2L_21960001 RAL-373_125b 813 chr2L 21981641 21981699 chr2L 21990856 21990908 roo 23 9211 7.0 5.0 6.0 3.3 9267 chr2L 21981641 exon CG2528 - chr2L 21986274 intron CG2528 - chr2L 21990908 exon CG2528 - chr2L_23_21985001 chr2L_21985001 RAL-373_125b 814 chr2L 21997526 21997589 chr2L 21997781 21997796 19 247 4.5 1.0 2.8 5.0 270 chr2L 21997526 intergenic not near genes chr2L 21997661 intergenic not near genes chr2L 21997796 intergenic not near genes chr2L_19_21995001 chr2L_21995001 RAL-373_125b 815 chr2L 22001634 22001674 chr2L 22001725 22001800 10 121 6.5 4.5 5.5 1.5 166 chr2L 22001634 intergenic not near genes chr2L 22001717 intergenic not near genes chr2L 22001800 intergenic not near genes chr2L_10_22000001 chr2L_22000001 RAL-373_125b 816 chr2L 22047213 22047256 chr2L 22047388 22047425 12 172 6.5 5.5 6.0 1.7 212 chr2L 22047213 intergenic not near genes chr2L 22047319 intergenic not near genes chr2L 22047425 intergenic not near genes chr2L_12_22045001 chr2L_22045001 RAL-373_125b 817 chr2L 22049745 22049768 chr2L 22049914 22049937 6 170 9.0 5.0 7.0 0.8 192 chr2L 22049745 intergenic not near genes chr2L 22049841 intergenic not near genes chr2L 22049937 intergenic not near genes chr2L_6_22045001 chr2L_22045001 RAL-373_125b 818 chr2L 22136337 22136389 chr2L 22136470 22136522 10 130 4.0 11.0 7.5 1.2 185 chr2L 22136337 intron CG42748 + chr2L 22136430 intron CG42748 + chr2L 22136522 intron CG42748 + chr2L_10_22135001 chr2L_22135001 RAL-373_125b 819 chr2L 22165474 22165529 chr2L 22165609 22165664 8 133 9.0 7.0 8.0 0.9 190 chr2L 22165474 3` UTR CG42748 + chr2L 22165569 3` UTR CG42748 + chr2L 22165664 3` UTR CG42748 + chr2L_8_22165001 chr2L_22165001 RAL-373_125b 820 chr2L 22191804 22192051 chr2L 22191942 22192190 48 136 4.0 5.5 4.8 8.3 386 chr2L 22191804 intron Ir40a - chr2L 22191997 intron Ir40a - chr2L 22192190 intron Ir40a - chr2L_48_22190001 chr2L_22190001 RAL-373_125b 821 chr2L 22294310 22294382 chr2L 22294443 22294517 10 135 4.0 2.0 3.0 2.5 207 chr2L 22294310 intergenic not near genes chr2L 22294414 intergenic not near genes chr2L 22294517 intergenic not near genes chr2L_10_22290001 chr2L_22290001 RAL-373_125b 822 chr2L 22545931 22546006 chr2L 22546077 22546152 17 138 4.5 5.5 5.0 2.8 221 chr2L 22545931 intron CG17490 + chr2L 22546042 intron CG17490 + chr2L 22546152 intron CG17490 + chr2L_17_22545001 chr2L_22545001 RAL-373_125b 823 chr2L 22548898 22548929 chr2L 22550144 22550204 1360 5 1269 0.0 4.5 2.2 1.6 1306 chr2L 22548898 intergenic CG17490 + chr2L 22549551 intergenic not near genes chr2L 22550204 intergenic CG17493 + chr2L_5_22545001 chr2L_22545001 RAL-373_125b 824 chr2L 22581929 22581989 chr2L 22583762 22583829 S-element 14 1838 7.0 3.5 5.2 2.3 1900 chr2L 22581929 intron CG17494 + chr2L 22582879 intron CG17494 + chr2L 22583829 intron CG17494 + chr2L_14_22580001 chr2L_22580001 RAL-373_125b 825 chr2L 22674024 22674057 chr2L 22674151 22674170 8 125 3.0 6.5 4.8 1.4 146 chr2L 22674024 intron CG40006 - chr2L 22674097 intron CG40006 - chr2L 22674170 intron CG40006 - chr2L_8_22670001 chr2L_22670001 RAL-373_125b 826 chr2L 22676083 22676152 chr2L 22676371 22676440 17 288 6.5 3.0 4.8 2.9 357 chr2L 22676083 exon CG40006 - chr2L 22676262 intron CG40006 - chr2L 22676440 intron CG40006 - chr2L_17_22675001 chr2L_22675001 RAL-373_125b 827 chr2L 22693857 22693943 chr2L 22694013 22694080 14 134 0.0 4.5 2.2 4.4 223 chr2L 22693857 intron CG40006 - chr2L 22693968 intron CG40006 - chr2L 22694080 intron CG40006 - chr2L_14_22690001 chr2L_22690001 RAL-373_125b 828 chr2L 22696619 22696627 chr2L 22696771 22696775 3S18 4 151 4.0 4.0 4.0 0.8 156 chr2L 22696619 intron CG40006 - chr2L 22696697 intron CG40006 - chr2L 22696775 intron CG40006 - chr2L_4_22695001 chr2L_22695001 RAL-373_125b 829 chr2L 22776386 22776446 chr2L 22778225 22778275 S-element 10 1837 5.5 6.0 5.8 1.5 1889 chr2L 22776386 intergenic not near genes chr2L 22777330 intergenic not near genes chr2L 22778275 intergenic not near genes chr2L_10_22775001 chr2L_22775001 RAL-373_125b 830 chr2L 22983911 22983957 chr2L 22984021 22984064 7 116 5.5 4.5 5.0 1.2 153 chr2L 22983911 intron cta + chr2L 22983988 intron cta + chr2L 22984064 intron cta + chr2L_7_22980001 chr2L_22980001 RAL-373_125b 831 chr2L 23168820 23168886 chr2L 23168936 23168993 9 111 8.0 4.0 6.0 1.3 173 chr2L 23168820 intron CG12567 - chr2L 23168906 intron CG12567 - chr2L 23168993 intron CG12567 - chr2L_9_23165001 chr2L_23165001 RAL-373_125b 832 chr2R 529321 529354 chr2R 537981 537996 Max-element 9 8663 5.0 15.0 10.0 0.8 8675 chr2R 529321 intron CG40378 + chr2R 533658 intron CG40378 + chr2R 537996 intron CG40378 + chr2R_9_530001 chr2R_530001 RAL-373_125b 833 chr2R 552751 552777 chr2R 553969 554006 1360 6 1236 14.5 10.0 12.2 0.5 1255 chr2R 552751 intron CG40378 + chr2R 553378 intron CG40378 + chr2R 554006 intron CG40378 + chr2R_6_550001 chr2R_550001 RAL-373_125b 834 chr2R 652226 652256 chr2R 652795 652809 4 564 15.0 15.5 15.2 0.2 583 chr2R 652226 intergenic not near genes chr2R 652518 intergenic not near genes chr2R 652809 intergenic not near genes chr2R_4_650001 chr2R_650001 RAL-373_125b 835 chr2R 1370157 1370188 chr2R 1370251 1370303 12 120 4.0 5.0 4.5 2.2 146 chr2R 1370157 intron,3` UTR l(2)41Ab +,CR44043 - chr2R 1370230 intron,3` UTR l(2)41Ab +,CR44043 - chr2R 1370303 intron,3` UTR l(2)41Ab +,CR44043 - chr2R_12_1370001 chr2R_1370001 RAL-373_125b 836 chr2R 1516564 1516601 chr2R 1521342 1521369 1731 20 4776 21.5 17.5 19.5 1.0 4805 chr2R 1516564 exon Maf1 - chr2R 1518966 intron Maf1 - chr2R 1521369 5` UTR Maf1 - chr2R_20_1515001 chr2R_1515001 RAL-373_125b 837 chr2R 2015103 2015163 chr2R 2015225 2015290 11 125 2.5 6.5 4.5 2.0 187 chr2R 2015103 intron CG17684 - chr2R 2015196 intron CG17684 - chr2R 2015290 intron CG17684 - chr2R_11_2015001 chr2R_2015001 RAL-373_125b 838 chr2R 2110461 2110502 chr2R 2118069 2118110 17.6 6 7605 7.5 1.0 4.2 1.2 7649 chr2R 2110461 intron CG17684 - chr2R 2114286 intron CG17684 - chr2R 2118110 intron CG17684 - chr2R_6_2110001 chr2R_2110001 RAL-373_125b 839 chr2R 2498945 2499010 chr2R 2508142 2508195 roo 15 9195 6.0 6.5 6.2 2.1 9250 chr2R 2498945 intron MFS17 - chr2R 2503570 intron MFS17 - chr2R 2508195 intron MFS17 - chr2R_15_2500001 chr2R_2500001 RAL-373_125b 840 chr2R 2591496 2591506 chr2R 2594217 2594232 roo 7 2723 27.5 22.0 24.8 0.3 2736 chr2R 2591496 intergenic not near genes chr2R 2592864 intergenic not near genes chr2R 2594232 intergenic not near genes chr2R_7_2590001 chr2R_2590001 RAL-373_125b 841 chr2R 3107699 3107743 chr2R 3108433 3108477 7 732 4.5 3.0 3.8 1.5 778 chr2R 3107699 intron CG42596 + chr2R 3108088 intron CG42596 + chr2R 3108477 intron CG42596 + chr2R_7_3105001 chr2R_3105001 RAL-373_125b 842 chr2R 3144046 3144108 chr2R 3393374 3393436 Doc 5 249324 19.0 5.5 12.2 0.4 249390 chr2R 3144046 intron CG42596 + chr2R 3268741 intergenic not near genes chr2R 3393436 intergenic not near genes chr2R_5_3265001 chr2R_3265001 RAL-373_125b 843 chr2R 3532579 3532630 chr2R 3536072 3536123 Doc 11 3493 1.5 5.5 3.5 2.4 3544 chr2R 3532579 intergenic not near genes chr2R 3534351 intergenic not near genes chr2R 3536123 intergenic not near genes chr2R_11_3530001 chr2R_3530001 RAL-373_125b 844 chr2R 3702639 3702660 chr2R 3702767 3702792 7 127 14.0 12.5 13.2 0.5 153 chr2R 3702639 intergenic not near genes chr2R 3702716 intergenic not near genes chr2R 3702792 intergenic not near genes chr2R_7_3700001 chr2R_3700001 RAL-373_125b 845 chr2R 3927698 3927716 chr2R 3927836 3927863 7 145 3.5 13.5 8.5 0.7 165 chr2R 3927698 intron uex - chr2R 3927780 intron uex - chr2R 3927863 intron uex - chr2R_7_3925001 chr2R_3925001 RAL-373_125b 846 chr2R 4015273 4015348 chr2R 4015496 4015556 19 220 6.0 6.0 6.0 2.7 283 chr2R 4015273 intron Haspin + chr2R 4015414 intron Haspin + chr2R 4015556 intron Haspin + chr2R_19_4015001 chr2R_4015001 RAL-373_125b 847 chr2R 4312885 4312977 chr2R 4313040 4313111 14 133 0.0 4.0 2.0 4.7 226 chr2R 4312885 intergenic not near genes chr2R 4312998 intergenic not near genes chr2R 4313111 intergenic not near genes chr2R_14_4310001 chr2R_4310001 RAL-373_125b 848 chr2R 4329521 4329552 chr2R 4329638 4329641 6 118 9.5 3.0 6.2 0.8 120 chr2R 4329521 intron Gprk1 - chr2R 4329581 intron Gprk1 - chr2R 4329641 intron Gprk1 - chr2R_6_4325001 chr2R_4325001 RAL-373_125b 849 chr2R 4350726 4350783 chr2R 4350856 4350913 12 128 7.0 6.5 6.8 1.5 187 chr2R 4350726 exon Gprk1 - chr2R 4350820 intron Gprk1 - chr2R 4350913 intron Gprk1 - chr2R_12_4350001 chr2R_4350001 RAL-373_125b 850 chr2R 4622908 4622945 chr2R 4624117 4624154 1360 10 1208 13.5 8.5 11.0 0.8 1246 chr2R 4622908 intergenic CR44101 - chr2R 4623531 intergenic not near genes chr2R 4624154 intergenic not near genes chr2R_10_4620001 chr2R_4620001 RAL-373_125b 851 chr2R 4622950 4622977 chr2R 4624109 4624186 1360 14 1195 9.0 6.0 7.5 1.6 1236 chr2R 4622950 intergenic CR44101 - chr2R 4623568 intergenic not near genes chr2R 4624186 intergenic not near genes chr2R_14_4620001 chr2R_4620001 RAL-373_125b 852 chr2R 4688104 4688129 chr2R 4688247 4688272 5 143 7.0 8.0 7.5 0.6 168 chr2R 4688104 intergenic not near genes chr2R 4688188 intergenic not near genes chr2R 4688272 intergenic not near genes chr2R_5_4685001 chr2R_4685001 RAL-373_125b 853 chr2R 4821178 4821245 chr2R 4821314 4821381 14 132 6.5 5.5 6.0 2.0 203 chr2R 4821178 intron CG17528 - chr2R 4821280 intron CG17528 - chr2R 4821381 intron CG17528 - chr2R_14_4820001 chr2R_4820001 RAL-373_125b 854 chr2R 4838832 4838894 chr2R 4840405 4840466 transib2 11 1570 8.0 11.5 9.8 1.0 1634 chr2R 4838832 intergenic not near genes chr2R 4839649 intergenic not near genes chr2R 4840466 intergenic not near genes chr2R_11_4835001 chr2R_4835001 RAL-373_125b 855 chr2R 4870716 4870741 chr2R 4871277 4871302 R1A1-element 6 560 5.5 9.0 7.2 0.7 586 chr2R 4870716 intergenic not near genes chr2R 4871009 intergenic not near genes chr2R 4871302 intergenic not near genes chr2R_6_4870001 chr2R_4870001 RAL-373_125b 856 chr2R 4933368 4933383 chr2R 4933946 4933992 5 604 6.5 9.0 7.8 0.6 624 chr2R 4933368 intron Ir41a + chr2R 4933680 intron Ir41a + chr2R 4933992 intron Ir41a + chr2R_5_4930001 chr2R_4930001 RAL-373_125b 857 chr2R 4940920 4940983 chr2R 4943420 4943483 4 2500 15.0 15.5 15.2 0.2 2563 chr2R 4940920 intron Ir41a + chr2R 4942202 intron Ir41a + chr2R 4943483 intron Ir41a + chr2R_4_4940001 chr2R_4940001 RAL-373_125b 858 chr2R 5019241 5019304 chr2R 5019375 5019440 15 134 6.0 5.0 5.5 2.3 199 chr2R 5019241 intron Ir41a + chr2R 5019340 intron Ir41a + chr2R 5019440 intron Ir41a + chr2R_15_5015001 chr2R_5015001 RAL-373_125b 859 chr2R 5040747 5040763 chr2R 5041282 5041300 4 534 0.0 10.0 5.0 0.7 553 chr2R 5040747 intergenic not near genes chr2R 5041024 intergenic not near genes chr2R 5041300 intergenic not near genes chr2R_4_5040001 chr2R_5040001 RAL-373_125b 860 chr2R 5075182 5075197 chr2R 5075360 5075364 5 175 12.5 0.0 6.2 0.7 182 chr2R 5075182 intergenic not near genes chr2R 5075273 intergenic not near genes chr2R 5075364 intergenic not near genes chr2R_5_5075001 chr2R_5075001 RAL-373_125b 861 chr2R 5075216 5075367 chr2R 5075757 5075829 11 519 0.0 7.0 3.5 2.4 613 chr2R 5075216 intergenic not near genes chr2R 5075522 intergenic not near genes chr2R 5075829 intergenic not near genes chr2R_11_5075001 chr2R_5075001 RAL-373_125b 862 chr2R 5080754 5080819 chr2R 5080890 5080923 17 133 8.5 14.0 11.2 1.4 169 chr2R 5080754 intergenic not near genes chr2R 5080838 intergenic not near genes chr2R 5080923 intergenic not near genes chr2R_17_5080001 chr2R_5080001 RAL-373_125b 863 chr2R 5192236 5192348 chr2R 5192407 5192424 6 105 0.0 2.5 1.2 2.7 188 chr2R 5192236 intron Nipped-A - chr2R 5192330 intron Nipped-A - chr2R 5192424 intron Nipped-A - chr2R_6_5190001 chr2R_5190001 RAL-373_125b 864 chr2R 5237298 5237346 chr2R 5237430 5237473 9 129 7.5 0.0 3.8 1.9 175 chr2R 5237298 intron Nipped-A - chr2R 5237386 intron Nipped-A - chr2R 5237473 intron Nipped-A - chr2R_9_5235001 chr2R_5235001 RAL-373_125b 865 chr2R 5417953 5418017 chr2R 5420635 5420698 Burdock 16 2680 7.0 10.0 8.5 1.7 2745 chr2R 5417953 intron laccase2 + chr2R 5419326 intron laccase2 + chr2R 5420698 intron laccase2 + chr2R_16_5415001 chr2R_5415001 RAL-373_125b 866 chr2R 5455748 5455776 chr2R 5455861 5455904 11 124 9.0 6.5 7.8 1.2 156 chr2R 5455748 3` UTR laccase2 + chr2R 5455826 3` UTR laccase2 + chr2R 5455904 3` UTR laccase2 + chr2R_11_5455001 chr2R_5455001 RAL-373_125b 867 chr2R 5472325 5472392 chr2R 5472470 5472537 21 139 7.5 3.5 5.5 3.2 212 chr2R 5472325 intron CG30440 - chr2R 5472431 intron CG30440 - chr2R 5472537 intron CG30440 - chr2R_21_5470001 chr2R_5470001 RAL-373_125b 868 chr2R 5509505 5509549 chr2R 5509651 5509695 11 145 5.0 6.0 5.5 1.7 190 chr2R 5509505 intron CG30438 + chr2R 5509600 intron CG30438 + chr2R 5509695 intron CG30438 + chr2R_11_5505001 chr2R_5505001 RAL-373_125b 869 chr2R 5603144 5603216 chr2R 5603276 5603348 31 127 0.5 4.0 2.2 9.7 204 chr2R 5603144 intergenic Fis1 - chr2R 5603246 intergenic Fis1 - chr2R 5603348 intergenic Fis1 - chr2R_31_5600001 chr2R_5600001 RAL-373_125b 870 chr2R 5750402 5750446 chr2R 5750543 5750588 19 138 10.0 4.5 7.2 2.3 186 chr2R 5750402 intergenic not near genes chr2R 5750495 intergenic not near genes chr2R 5750588 intergenic not near genes chr2R_19_5750001 chr2R_5750001 RAL-373_125b 871 chr2R 5774237 5774296 chr2R 5774541 5774600 16 302 4.0 3.5 3.8 3.3 363 chr2R 5774237 3` UTR Gp210 + chr2R 5774418 intergenic Gp210 +,ZnT41F - chr2R 5774600 intergenic ZnT41F -,Gp210 + chr2R_16_5770001 chr2R_5770001 RAL-373_125b 872 chr2R 5790429 5790489 chr2R 5790554 5790624 19 133 4.5 5.0 4.8 3.3 195 chr2R 5790429 intergenic not near genes chr2R 5790526 intergenic not near genes chr2R 5790624 intergenic not near genes chr2R_19_5790001 chr2R_5790001 RAL-373_125b 873 chr2R 5794189 5794255 chr2R 5794360 5794418 14 171 7.5 7.5 7.5 1.6 229 chr2R 5794189 intergenic not near genes chr2R 5794304 intergenic not near genes chr2R 5794418 intergenic not near genes chr2R_14_5790001 chr2R_5790001 RAL-373_125b 874 chr2R 5814043 5814116 chr2R 5814187 5814255 25 136 4.0 4.5 4.2 4.8 212 chr2R 5814043 intron dpr12 + chr2R 5814149 intron dpr12 + chr2R 5814255 intron dpr12 + chr2R_25_5810001 chr2R_5810001 RAL-373_125b 875 chr2R 5833019 5833080 chr2R 5833134 5833209 13 116 5.0 4.0 4.5 2.4 190 chr2R 5833019 intron dpr12 + chr2R 5833114 intron dpr12 + chr2R 5833209 intron dpr12 + chr2R_13_5830001 chr2R_5830001 RAL-373_125b 876 chr2R 5861253 5861266 chr2R 5861424 5861432 6 170 7.5 4.0 5.8 0.9 179 chr2R 5861253 intergenic dpr12 + chr2R 5861342 intergenic not near genes chr2R 5861432 intergenic not near genes chr2R_6_5860001 chr2R_5860001 RAL-373_125b 877 chr2R 5861268 5861294 chr2R 5861418 5861464 9 166 6.5 4.0 5.2 1.5 196 chr2R 5861268 intergenic dpr12 + chr2R 5861366 intergenic not near genes chr2R 5861464 intergenic not near genes chr2R_9_5860001 chr2R_5860001 RAL-373_125b 878 chr2R 5861295 5861310 chr2R 5861417 5861481 5 159 3.5 4.0 3.8 1.0 186 chr2R 5861295 intergenic dpr12 + chr2R 5861388 intergenic not near genes chr2R 5861481 intergenic not near genes chr2R_5_5860001 chr2R_5860001 RAL-373_125b 879 chr2R 5869233 5869299 chr2R 5874359 5874425 flea 21 5124 8.0 6.5 7.2 2.6 5192 chr2R 5869233 intergenic not near genes chr2R 5871829 intergenic not near genes chr2R 5874425 intergenic not near genes chr2R_21_5870001 chr2R_5870001 RAL-373_125b 880 chr2R 5878894 5878955 chr2R 5879019 5879085 14 130 3.5 6.0 4.8 2.4 191 chr2R 5878894 intergenic CG44438 - chr2R 5878990 intergenic CG44438 - chr2R 5879085 intergenic CG44438 - chr2R_14_5875001 chr2R_5875001 RAL-373_125b 881 chr2R 5896959 5896981 chr2R 5897095 5897117 8 135 12.0 3.0 7.5 0.9 158 chr2R 5896959 intron CG43366 + chr2R 5897038 intron CG43366 + chr2R 5897117 intron CG43366 + chr2R_8_5895001 chr2R_5895001 RAL-373_125b 882 chr2R 5896982 5897029 chr2R 5897093 5897165 19 132 8.5 3.0 5.8 2.8 183 chr2R 5896982 intron CG43366 + chr2R 5897074 intron CG43366 + chr2R 5897165 intron CG43366 + chr2R_19_5895001 chr2R_5895001 RAL-373_125b 883 chr2R 5902135 5902182 chr2R 5909736 5909791 17.6 5 7607 5.5 5.5 5.5 0.8 7656 chr2R 5902135 intron CG43366 + chr2R 5905963 intron CG43366 + chr2R 5909791 intron CG43366 + chr2R_5_5905001 chr2R_5905001 RAL-373_125b 884 chr2R 5917732 5917801 chr2R 5917861 5917920 14 122 6.0 9.5 7.8 1.6 188 chr2R 5917732 intron CG43366 + chr2R 5917826 intron CG43366 + chr2R 5917920 intron CG43366 + chr2R_14_5915001 chr2R_5915001 RAL-373_125b 885 chr2R 5939623 5939667 chr2R 5940870 5940914 INE-1 15 1244 6.0 6.5 6.2 2.1 1291 chr2R 5939623 intergenic not near genes chr2R 5940268 intergenic not near genes chr2R 5940914 intergenic not near genes chr2R_15_5940001 chr2R_5940001 RAL-373_125b 886 chr2R 5945581 5945638 chr2R 5945695 5945745 10 118 1.0 4.5 2.8 2.6 164 chr2R 5945581 intergenic not near genes chr2R 5945663 intergenic not near genes chr2R 5945745 intergenic not near genes chr2R_10_5945001 chr2R_5945001 RAL-373_125b 887 chr2R 5953074 5953095 chr2R 5953167 5953222 7 120 2.0 3.0 2.5 2.0 148 chr2R 5953074 intergenic not near genes chr2R 5953148 intergenic not near genes chr2R 5953222 intergenic not near genes chr2R_7_5950001 chr2R_5950001 RAL-373_125b 888 chr2R 5964916 5964948 chr2R 5965029 5965076 10 125 7.5 9.5 8.5 1.1 160 chr2R 5964916 intron CG7881 - chr2R 5964996 intron CG7881 - chr2R 5965076 intron CG7881 - chr2R_10_5960001 chr2R_5960001 RAL-373_125b 889 chr2R 6033410 6033455 chr2R 6033544 6033584 7 134 5.0 9.5 7.2 0.9 174 chr2R 6033410 intron SCAP - chr2R 6033497 intron SCAP - chr2R 6033584 intron SCAP - chr2R_7_6030001 chr2R_6030001 RAL-373_125b 890 chr2R 6088328 6088385 chr2R 6088467 6088528 22 138 9.5 2.5 6.0 3.1 200 chr2R 6088328 intergenic not near genes chr2R 6088428 intergenic not near genes chr2R 6088528 intergenic not near genes chr2R_22_6085001 chr2R_6085001 RAL-373_125b 891 chr2R 6096688 6096704 chr2R 6101925 6101946 BS 6 5241 11.5 5.5 8.5 0.6 5258 chr2R 6096688 intron EcR - chr2R 6099317 intron EcR - chr2R 6101946 intron EcR - chr2R_6_6095001 chr2R_6095001 RAL-373_125b 892 chr2R 6096707 6096732 chr2R 6101916 6101980 BS 10 5237 9.0 5.0 7.0 1.2 5273 chr2R 6096707 intron EcR - chr2R 6099344 intron EcR - chr2R 6101980 intron EcR - chr2R_10_6095001 chr2R_6095001 RAL-373_125b 893 chr2R 6173502 6173575 chr2R 6173630 6173702 15 126 4.0 6.5 5.2 2.4 200 chr2R 6173502 intergenic Cyp6w1 + chr2R 6173602 intergenic Cyp6w1 + chr2R 6173702 5` UTR Cyp6w1 + chr2R_15_6170001 chr2R_6170001 RAL-373_125b 894 chr2R 6236711 6236736 chr2R 6236853 6236893 6 154 2.5 5.5 4.0 1.2 182 chr2R 6236711 intron bin3 + chr2R 6236802 intron bin3 + chr2R 6236893 intron bin3 + chr2R_6_6235001 chr2R_6235001 RAL-373_125b 895 chr2R 6494486 6494547 chr2R 6499298 6499359 F-element 16 4807 5.0 4.0 4.5 2.9 4873 chr2R 6494486 intergenic not near genes chr2R 6496922 intergenic not near genes chr2R 6499359 intergenic not near genes chr2R_16_6495001 chr2R_6495001 RAL-373_125b 896 chr2R 6579736 6579798 chr2R 6584872 6584934 flea 21 5135 4.0 7.0 5.5 3.2 5198 chr2R 6579736 intron jing + chr2R 6582335 intron jing + chr2R 6584934 intron jing + chr2R_21_6580001 chr2R_6580001 RAL-373_125b 897 chr2R 6597834 6597836 chr2R 6597967 6597974 4 137 14.0 5.5 9.8 0.4 140 chr2R 6597834 intron jing + chr2R 6597904 intron jing + chr2R 6597974 intron jing + chr2R_4_6595001 chr2R_6595001 RAL-373_125b 898 chr2R 6597838 6597891 chr2R 6597965 6598029 14 131 7.0 4.5 5.8 2.1 191 chr2R 6597838 intron jing + chr2R 6597934 intron jing + chr2R 6598029 intron jing + chr2R_14_6595001 chr2R_6595001 RAL-373_125b 899 chr2R 6607884 6607894 chr2R 6608036 6608046 5 150 11.5 6.5 9.0 0.5 162 chr2R 6607884 intron jing + chr2R 6607965 intron jing + chr2R 6608046 intron jing + chr2R_5_6605001 chr2R_6605001 RAL-373_125b 900 chr2R 6607903 6607953 chr2R 6608034 6608105 18 148 5.5 6.5 6.0 2.6 202 chr2R 6607903 intron jing + chr2R 6608004 intron jing + chr2R 6608105 intron jing + chr2R_18_6605001 chr2R_6605001 RAL-373_125b 901 chr2R 6753556 6753600 chr2R 6753683 6753685 10 121 11.0 6.5 8.8 1.0 129 chr2R 6753556 intron Eb1 + chr2R 6753620 intron Eb1 + chr2R 6753685 intron Eb1 + chr2R_10_6750001 chr2R_6750001 RAL-373_125b 902 chr2R 6843748 6843779 chr2R 6843883 6843889 9 134 9.5 10.0 9.8 0.8 141 chr2R 6843748 intergenic not near genes chr2R 6843818 intergenic not near genes chr2R 6843889 intergenic not near genes chr2R_9_6840001 chr2R_6840001 RAL-373_125b 903 chr2R 6876183 6876237 chr2R 6876310 6876350 24 128 3.0 8.5 5.8 3.5 167 chr2R 6876183 5` UTR,intron CR44169 +,Spn42Da - chr2R 6876266 intron,intron CR44169 +,Spn42Da - chr2R 6876350 5` UTR,intron CR44169 +,Spn42Da - chr2R_24_6875001 chr2R_6875001 RAL-373_125b 904 chr2R 6895374 6895434 chr2R 6895483 6895563 21 116 5.0 7.0 6.0 3.0 189 chr2R 6895374 intron CG30158 + chr2R 6895468 intron CG30158 + chr2R 6895563 intron CG30158 + chr2R_21_6895001 chr2R_6895001 RAL-373_125b 905 chr2R 6952121 6952182 chr2R 6959751 6959812 opus 13 7630 7.5 2.5 5.0 2.2 7691 chr2R 6952121 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R 6955966 intron,intron mim -,CheB42c - chr2R 6959812 intron,intron mim -,CheB42c - chr2R_13_6955001 chr2R_6955001 RAL-373_125b 906 chr2R 6964238 6964289 chr2R 6964365 6964416 12 127 11.5 6.5 9.0 1.2 178 chr2R 6964238 intron,intron mim -,CheB42c - chr2R 6964327 intron,intron mim -,CheB42c - chr2R 6964416 intron,intron mim -,CheB42c - chr2R_12_6960001 chr2R_6960001 RAL-373_125b 907 chr2R 6978593 6978664 chr2R 6978826 6978890 23 231 8.5 5.5 7.0 2.9 297 chr2R 6978593 exon vimar - chr2R 6978742 intron vimar - chr2R 6978890 intron vimar - chr2R_23_6975001 chr2R_6975001 RAL-373_125b 908 chr2R 7066406 7066478 chr2R 7066672 7066691 24 260 5.5 5.5 5.5 3.7 285 chr2R 7066406 intergenic Tsp42Er + chr2R 7066548 intergenic Tsp42Er + chr2R 7066691 intergenic not near genes chr2R_24_7065001 chr2R_7065001 RAL-373_125b 909 chr2R 7103346 7103399 chr2R 7103467 7103475 6 112 4.5 8.0 6.2 0.8 129 chr2R 7103346 intron esn + chr2R 7103410 intron esn + chr2R 7103475 intron esn + chr2R_6_7100001 chr2R_7100001 RAL-373_125b 910 chr2R 7160509 7160538 chr2R 7160637 7160666 11 125 7.5 5.0 6.2 1.5 157 chr2R 7160509 intron pk + chr2R 7160588 intron pk + chr2R 7160666 intron pk + chr2R_11_7160001 chr2R_7160001 RAL-373_125b 911 chr2R 7164223 7164284 chr2R 7164464 7164525 24 239 2.5 11.0 6.8 3.1 302 chr2R 7164223 intron pk + chr2R 7164374 intron pk + chr2R 7164525 intron pk + chr2R_24_7160001 chr2R_7160001 RAL-373_125b 912 chr2R 7196534 7196584 chr2R 7201354 7201409 F-element 12 4823 3.5 3.5 3.5 2.7 4875 chr2R 7196534 intron pk + chr2R 7198972 intron pk + chr2R 7201409 intron pk + chr2R_12_7195001 chr2R_7195001 RAL-373_125b 913 chr2R 7235783 7235847 chr2R 7240925 7240966 jockey 10 5133 6.5 3.0 4.8 1.7 5183 chr2R 7235783 intergenic not near genes chr2R 7238374 intergenic not near genes chr2R 7240966 intergenic not near genes chr2R_10_7235001 chr2R_7235001 RAL-373_125b 914 chr2R 7434882 7434904 chr2R 7439216 7439255 Juan 6 4348 10.5 8.0 9.2 0.6 4373 chr2R 7434882 intergenic so + chr2R 7437068 intergenic not near genes chr2R 7439255 intergenic not near genes chr2R_6_7435001 chr2R_7435001 RAL-373_125b 915 chr2R 7546222 7546252 chr2R 7546369 7546393 6 150 9.5 13.5 11.5 0.5 171 chr2R 7546222 intron Corin + chr2R 7546308 intron Corin + chr2R 7546393 intron Corin + chr2R_6_7545001 chr2R_7545001 RAL-373_125b 916 chr2R 7590615 7590669 chr2R 7590732 7590756 6 99 5.0 7.5 6.2 0.8 141 chr2R 7590615 exon scra + chr2R 7590686 exon scra + chr2R 7590756 exon scra + chr2R_6_7590001 chr2R_7590001 RAL-373_125b 917 chr2R 7608367 7608426 chr2R 7613619 7613679 I-element 18 5251 5.5 9.0 7.2 2.2 5312 chr2R 7608367 intron CG1358 - chr2R 7611023 intron CG1358 - chr2R 7613679 intron CG1358 - chr2R_18_7610001 chr2R_7610001 RAL-373_125b 918 chr2R 7625087 7625094 chr2R 7625235 7625240 5 147 11.5 7.0 9.2 0.5 153 chr2R 7625087 intron CG43340 + chr2R 7625164 intron CG43340 + chr2R 7625240 intron CG43340 + chr2R_5_7625001 chr2R_7625001 RAL-373_125b 919 chr2R 7677413 7677458 chr2R 7677564 7677567 13 157 4.0 4.0 4.0 2.6 154 chr2R 7677413 3` UTR CG1399 - chr2R 7677490 3` UTR CG1399 - chr2R 7677567 3` UTR CG1399 - chr2R_13_7675001 chr2R_7675001 RAL-373_125b 920 chr2R 7691965 7692038 chr2R 7692096 7692169 10 130 4.0 6.5 5.2 1.6 204 chr2R 7691965 intron CG1399 - chr2R 7692067 intron CG1399 - chr2R 7692169 intron CG1399 - chr2R_10_7690001 chr2R_7690001 RAL-373_125b 921 chr2R 7737866 7737906 chr2R 7737995 7738035 6 129 9.5 6.5 8.0 0.7 169 chr2R 7737866 intergenic not near genes chr2R 7737950 intergenic not near genes chr2R 7738035 intergenic not near genes chr2R_6_7735001 chr2R_7735001 RAL-373_125b 922 chr2R 7760241 7760306 chr2R 7760423 7760467 24 178 8.0 8.0 8.0 2.7 226 chr2R 7760241 intron,intron CG30497 -,CG45093 - chr2R 7760354 intron,intron CG30497 -,CG45093 - chr2R 7760467 intron,intron CG30497 -,CG45093 - chr2R_24_7760001 chr2R_7760001 RAL-373_125b 923 chr2R 7814687 7814758 chr2R 7814871 7814925 14 183 2.0 5.0 3.5 3.1 238 chr2R 7814687 3` UTR CG1882 + chr2R 7814806 3` UTR CG1882 + chr2R 7814925 3` UTR CG1882 + chr2R_14_7810001 chr2R_7810001 RAL-373_125b 924 chr2R 7815630 7815649 chr2R 7822149 7822167 Burdock 6 6519 18.5 6.5 12.5 0.4 6537 chr2R 7815630 intergenic CG1882 + chr2R 7818898 intergenic not near genes chr2R 7822167 3` UTR cathD - chr2R_6_7815001 chr2R_7815001 RAL-373_125b 925 chr2R 7815661 7815696 chr2R 7822180 7822208 Burdock 11 6517 10.0 11.5 10.8 0.9 6547 chr2R 7815661 intergenic CG1882 + chr2R 7818934 intergenic not near genes chr2R 7822208 3` UTR cathD - chr2R_11_7815001 chr2R_7815001 RAL-373_125b 926 chr2R 7862216 7862249 chr2R 7867348 7867383 flea 8 5132 11.5 2.0 6.8 1.0 5167 chr2R 7862216 intron Dgk - chr2R 7864800 intron Dgk - chr2R 7867383 intron Dgk - chr2R_8_7860001 chr2R_7860001 RAL-373_125b 927 chr2R 7869147 7869199 chr2R 7873983 7874034 Doc 16 4834 8.0 7.5 7.8 1.8 4887 chr2R 7869147 intron Dgk - chr2R 7871590 intron Dgk - chr2R 7874034 intron Dgk - chr2R_16_7870001 chr2R_7870001 RAL-373_125b 928 chr2R 7897136 7897148 chr2R 7897270 7897282 4 135 0.0 13.0 6.5 0.5 146 chr2R 7897136 intron CG30377 + chr2R 7897209 intron CG30377 + chr2R 7897282 intron CG30377 + chr2R_4_7895001 chr2R_7895001 RAL-373_125b 929 chr2R 7942895 7942972 chr2R 7943030 7943107 23 127 3.0 4.0 3.5 5.1 212 chr2R 7942895 intron CG14764 - chr2R 7943001 intron CG14764 - chr2R 7943107 intron CG14764 - chr2R_23_7940001 chr2R_7940001 RAL-373_125b 930 chr2R 8007553 8007601 chr2R 8007683 8007741 7 139 6.5 0.0 3.2 1.7 188 chr2R 8007553 intron Odc2 + chr2R 8007647 intron Odc2 + chr2R 8007741 intron Odc2 + chr2R_7_8005001 chr2R_8005001 RAL-373_125b 931 chr2R 8015633 8015648 chr2R 8017686 8017721 5 2068 7.5 4.0 5.8 0.7 2088 chr2R 8015633 intergenic mir-4981 + chr2R 8016677 intergenic not near genes chr2R 8017721 intergenic not near genes chr2R_5_8015001 chr2R_8015001 RAL-373_125b 932 chr2R 8015657 8015670 chr2R 8017682 8017733 6 2052 5.0 4.0 4.5 1.1 2076 chr2R 8015657 intergenic mir-4981 + chr2R 8016695 intergenic not near genes chr2R 8017733 intergenic not near genes chr2R_6_8015001 chr2R_8015001 RAL-373_125b 933 chr2R 8026762 8026836 chr2R 8026888 8026962 16 125 4.0 2.5 3.2 3.8 200 chr2R 8026762 intergenic CR45267 + chr2R 8026862 intergenic CR45267 + chr2R 8026962 intergenic CR45267 + chr2R_16_8025001 chr2R_8025001 RAL-373_125b 934 chr2R 8036210 8036280 chr2R 8036342 8036387 10 124 5.5 3.5 4.5 1.8 177 chr2R 8036210 intron Optix + chr2R 8036298 intron Optix + chr2R 8036387 intron Optix + chr2R_10_8035001 chr2R_8035001 RAL-373_125b 935 chr2R 8044523 8044551 chr2R 8044652 8044686 9 131 9.0 13.5 11.2 0.7 163 chr2R 8044523 intergenic not near genes chr2R 8044604 intergenic not near genes chr2R 8044686 intergenic not near genes chr2R_9_8040001 chr2R_8040001 RAL-373_125b 936 chr2R 8089211 8089282 chr2R 8089347 8089408 9 135 4.5 2.5 3.5 2.0 197 chr2R 8089211 3` UTR sut2 + chr2R 8089310 intergenic sut2 +,sut3 + chr2R 8089408 intergenic sut3 +,sut2 + chr2R_9_8085001 chr2R_8085001 RAL-373_125b 937 chr2R 8105884 8105956 chr2R 8106025 8106096 25 135 6.0 3.5 4.8 4.3 212 chr2R 8105884 5` UTR Cul4 - chr2R 8105990 intron Cul4 - chr2R 8106096 5` UTR Cul4 - chr2R_25_8105001 chr2R_8105001 RAL-373_125b 938 chr2R 8157869 8157910 chr2R 8157989 8158012 10 128 3.5 2.5 3.0 2.5 143 chr2R 8157869 5` UTR CR44068 + chr2R 8157940 5` UTR CR44068 + chr2R 8158012 5` UTR CR44068 + chr2R_10_8155001 chr2R_8155001 RAL-373_125b 939 chr2R 8160886 8160939 chr2R 8161026 8161079 1360 17 137 8.5 9.5 9.0 1.7 193 chr2R 8160886 exon CG8708 - chr2R 8160982 intron CG8708 - chr2R 8161079 intron CG8708 - chr2R_17_8160001 chr2R_8160001 RAL-373_125b 940 chr2R 8203713 8203776 chr2R 8203855 8203914 8 142 2.0 5.0 3.5 1.8 201 chr2R 8203713 intron LRP1 + chr2R 8203814 intron LRP1 + chr2R 8203914 intron LRP1 + chr2R_8_8200001 chr2R_8200001 RAL-373_125b 941 chr2R 8235999 8236024 chr2R 8236124 8236154 4 129 6.5 3.5 5.0 0.7 155 chr2R 8235999 intergenic not near genes chr2R 8236076 intergenic not near genes chr2R 8236154 intergenic not near genes chr2R_4_8235001 chr2R_8235001 RAL-373_125b 942 chr2R 8265510 8265580 chr2R 8265663 8265731 14 147 5.0 5.0 5.0 2.3 221 chr2R 8265510 intergenic CG30375 - chr2R 8265620 intergenic CG30375 - chr2R 8265731 3` UTR CG30375 - chr2R_14_8265001 chr2R_8265001 RAL-373_125b 943 chr2R 8277599 8277654 chr2R 8277738 8277764 17 132 6.5 8.0 7.2 2.1 165 chr2R 8277599 5` UTR CR44280 + chr2R 8277682 5` UTR CR44280 + chr2R 8277764 5` UTR CR44280 + chr2R_17_8275001 chr2R_8275001 RAL-373_125b 944 chr2R 8330825 8330887 chr2R 8331356 8331394 roo 16 530 7.5 7.5 7.5 1.9 569 chr2R 8330825 intron pdm3 + chr2R 8331110 intron pdm3 + chr2R 8331394 intron pdm3 + chr2R_16_8330001 chr2R_8330001 RAL-373_125b 945 chr2R 8345229 8345260 chr2R 8345351 8345366 7 112 10.0 5.0 7.5 0.8 137 chr2R 8345229 intron pdm3 + chr2R 8345298 intron pdm3 + chr2R 8345366 intron pdm3 + chr2R_7_8345001 chr2R_8345001 RAL-373_125b 946 chr2R 8345261 8345297 chr2R 8345350 8345415 14 110 5.0 5.0 5.0 2.3 154 chr2R 8345261 intron pdm3 + chr2R 8345338 intron pdm3 + chr2R 8345415 intron pdm3 + chr2R_14_8345001 chr2R_8345001 RAL-373_125b 947 chr2R 8379744 8379808 chr2R 8379885 8379954 15 142 7.0 3.5 5.2 2.4 210 chr2R 8379744 intron pdm3 + chr2R 8379849 intron pdm3 + chr2R 8379954 intron pdm3 + chr2R_15_8375001 chr2R_8375001 RAL-373_125b 948 chr2R 8398170 8398199 chr2R 8402999 8403030 Doc 7 4829 13.5 6.5 10.0 0.6 4860 chr2R 8398170 intron CG2121 - chr2R 8400600 intron CG2121 - chr2R 8403030 intron CG2121 - chr2R_7_8400001 chr2R_8400001 RAL-373_125b 949 chr2R 8398201 8398231 chr2R 8402987 8403062 Doc 13 4823 7.5 6.0 6.8 1.7 4861 chr2R 8398201 intron CG2121 - chr2R 8400632 intron CG2121 - chr2R 8403062 intron CG2121 - chr2R_13_8400001 chr2R_8400001 RAL-373_125b 950 chr2R 8408795 8408834 chr2R 8408962 8409005 16 166 11.5 6.5 9.0 1.6 210 chr2R 8408795 intron CG2121 - chr2R 8408900 intron CG2121 - chr2R 8409005 intron CG2121 - chr2R_16_8405001 chr2R_8405001 RAL-373_125b 951 chr2R 8416278 8416288 chr2R 8417144 8417156 I-element 4 869 7.5 6.0 6.8 0.5 878 chr2R 8416278 intergenic not near genes chr2R 8416717 intergenic CG43296 - chr2R 8417156 intergenic CG43296 - chr2R_4_8415001 chr2R_8415001 RAL-373_125b 952 chr2R 8483931 8483992 chr2R 8484051 8484108 6 116 8.0 13.0 10.5 0.5 177 chr2R 8483931 intron mtt - chr2R 8484020 intron mtt - chr2R 8484108 intron mtt - chr2R_6_8480001 chr2R_8480001 RAL-373_125b 953 chr2R 8489943 8489968 chr2R 8490079 8490104 4 136 0.5 9.0 4.8 0.7 161 chr2R 8489943 intron mtt - chr2R 8490024 intron mtt - chr2R 8490104 intron mtt - chr2R_4_8490001 chr2R_8490001 RAL-373_125b 954 chr2R 8538837 8538889 chr2R 8538948 8539021 18 123 4.0 5.0 4.5 3.3 184 chr2R 8538837 intergenic not near genes chr2R 8538929 intergenic not near genes chr2R 8539021 intergenic not near genes chr2R_18_8535001 chr2R_8535001 RAL-373_125b 955 chr2R 8565999 8566050 chr2R 8566991 8567052 1360 18 997 8.0 4.5 6.2 2.5 1053 chr2R 8565999 5` UTR Cyp6a14 - chr2R 8566526 5` UTR Cyp6a14 - chr2R 8567052 5` UTR Cyp6a14 - chr2R_18_8565001 chr2R_8565001 RAL-373_125b 956 chr2R 8569153 8569193 chr2R 8569505 8569551 13 358 7.0 6.5 6.8 1.7 398 chr2R 8569153 intergenic not near genes chr2R 8569352 intergenic not near genes chr2R 8569551 intergenic not near genes chr2R_13_8565001 chr2R_8565001 RAL-373_125b 957 chr2R 8587982 8588043 chr2R 8588103 8588177 22 128 3.5 8.5 6.0 3.1 195 chr2R 8587982 intergenic not near genes chr2R 8588080 intergenic not near genes chr2R 8588177 intergenic not near genes chr2R_22_8585001 chr2R_8585001 RAL-373_125b 958 chr2R 8722724 8722794 chr2R 8723010 8723057 pogo 18 280 4.0 5.0 4.5 3.3 333 chr2R 8722724 intron CG14767 - chr2R 8722890 intron CG14767 - chr2R 8723057 intron CG14767 - chr2R_18_8720001 chr2R_8720001 RAL-373_125b 959 chr2R 8766724 8766786 chr2R 8766981 8767034 11 257 3.0 5.5 4.2 2.1 310 chr2R 8766724 intergenic not near genes chr2R 8766879 intergenic not near genes chr2R 8767034 intergenic not near genes chr2R_11_8765001 chr2R_8765001 RAL-373_125b 960 chr2R 8777872 8777937 chr2R 8784113 8784178 diver 22 6240 5.0 8.5 6.8 2.8 6306 chr2R 8777872 intergenic not near genes chr2R 8781025 intergenic not near genes chr2R 8784178 intergenic not near genes chr2R_22_8780001 chr2R_8780001 RAL-373_125b 961 chr2R 8806285 8806350 chr2R 8806534 8806594 13 241 6.0 5.5 5.8 1.9 309 chr2R 8806285 intron sns + chr2R 8806440 intron sns + chr2R 8806594 intron sns + chr2R_13_8805001 chr2R_8805001 RAL-373_125b 962 chr2R 8950814 8950826 chr2R 8950940 8950955 4 128 13.5 7.5 10.5 0.3 141 chr2R 8950814 intron,intron CG33199 -,CG8229 - chr2R 8950884 intron,intron CG33199 -,CG8229 - chr2R 8950955 5` UTR,5` UTR CG33199 -,CG8229 - chr2R_4_8950001 chr2R_8950001 RAL-373_125b 963 chr2R 8950828 8950882 chr2R 8950937 8950996 21 118 6.5 7.0 6.8 2.7 168 chr2R 8950828 intron,intron CG33199 -,CG8229 - chr2R 8950912 5` UTR,5` UTR CG33199 -,CG8229 - chr2R 8950996 5` UTR,5` UTR CG33199 -,CG8229 - chr2R_21_8950001 chr2R_8950001 RAL-373_125b 964 chr2R 8964526 8964570 chr2R 8964943 8964992 10 420 3.0 3.5 3.2 2.4 466 chr2R 8964526 intron CG8216 - chr2R 8964759 intron CG8216 - chr2R 8964992 intron CG8216 - chr2R_10_8960001 chr2R_8960001 RAL-373_125b 965 chr2R 8967416 8967697 chr2R 8967613 8967853 23 182 10.0 12.5 11.2 1.9 437 chr2R 8967416 intron CG8216 - chr2R 8967634 intron CG8216 - chr2R 8967853 intron CG8216 - chr2R_23_8965001 chr2R_8965001 RAL-373_125b 966 chr2R 8976571 8976638 chr2R 8976700 8976742 17 121 7.0 9.5 8.2 1.8 171 chr2R 8976571 intron CG8213 - chr2R 8976656 intron CG8213 - chr2R 8976742 intron CG8213 - chr2R_17_8975001 chr2R_8975001 RAL-373_125b 967 chr2R 9055755 9055787 chr2R 9055885 9055917 6 129 11.5 6.0 8.8 0.6 162 chr2R 9055755 intron CG13743 - chr2R 9055836 intron CG13743 - chr2R 9055917 intron CG13743 - chr2R_6_9055001 chr2R_9055001 RAL-373_125b 968 chr2R 9055788 9055819 chr2R 9055881 9055913 6 114 8.5 6.0 7.2 0.7 125 chr2R 9055788 intron CG13743 - chr2R 9055850 intron CG13743 - chr2R 9055913 intron CG13743 - chr2R_6_9055001 chr2R_9055001 RAL-373_125b 969 chr2R 9119872 9119940 chr2R 9120017 9120057 30 141 7.0 6.0 6.5 4.0 185 chr2R 9119872 intron Su(var)2-10 + chr2R 9119964 intron Su(var)2-10 + chr2R 9120057 intron Su(var)2-10 + chr2R_30_9115001 chr2R_9115001 RAL-373_125b 970 chr2R 9212655 9212696 chr2R 9213191 9213232 roo 10 534 8.5 0.5 4.5 1.8 577 chr2R 9212655 intergenic CR45309 + chr2R 9212944 intergenic CR45309 + chr2R 9213232 5` UTR CR45309 + chr2R_10_9210001 chr2R_9210001 RAL-373_125b 971 chr2R 9227828 9227855 chr2R 9227965 9227992 11 131 11.5 3.0 7.2 1.3 164 chr2R 9227828 3` UTR hig - chr2R 9227910 3` UTR hig - chr2R 9227992 3` UTR hig - chr2R_11_9225001 chr2R_9225001 RAL-373_125b 972 chr2R 9227860 9227888 chr2R 9227957 9228018 6 126 5.5 3.0 4.2 1.2 158 chr2R 9227860 3` UTR hig - chr2R 9227939 3` UTR hig - chr2R 9228018 3` UTR hig - chr2R_6_9225001 chr2R_9225001 RAL-373_125b 973 chr2R 9364324 9364382 chr2R 9364445 9364503 15 119 3.5 6.0 4.8 2.6 179 chr2R 9364324 intron CG13954 - chr2R 9364414 intron CG13954 - chr2R 9364503 intron CG13954 - chr2R_15_9360001 chr2R_9360001 RAL-373_125b 974 chr2R 9368078 9368134 chr2R 9368204 9368233 9 115 9.0 0.0 4.5 1.6 155 chr2R 9368078 intron CG13954 - chr2R 9368156 intron CG13954 - chr2R 9368233 intron CG13954 - chr2R_9_9365001 chr2R_9365001 RAL-373_125b 975 chr2R 9461190 9461253 chr2R 9461329 9461392 16 134 6.0 10.5 8.2 1.7 202 chr2R 9461190 intron Camta + chr2R 9461291 intron Camta + chr2R 9461392 intron Camta + chr2R_16_9460001 chr2R_9460001 RAL-373_125b 976 chr2R 9479528 9479602 chr2R 9479658 9479732 23 128 9.0 12.5 10.8 1.9 204 chr2R 9479528 intergenic not near genes chr2R 9479630 intergenic not near genes chr2R 9479732 intergenic not near genes chr2R_23_9475001 chr2R_9475001 RAL-373_125b 977 chr2R 9510616 9510694 chr2R 9510782 9510860 10 162 4.5 3.5 4.0 2.0 244 chr2R 9510616 exon brp + chr2R 9510738 intron brp + chr2R 9510860 exon brp + chr2R_10_9510001 chr2R_9510001 RAL-373_125b 978 chr2R 9541580 9541649 chr2R 9541707 9541776 16 124 3.0 6.5 4.8 2.8 196 chr2R 9541580 intergenic brp +,CG1888 - chr2R 9541678 intergenic brp +,CG1888 - chr2R 9541776 intergenic CG1888 -,brp + chr2R_16_9540001 chr2R_9540001 RAL-373_125b 979 chr2R 9561798 9561837 chr2R 9561913 9561975 7 132 4.5 3.0 3.8 1.5 177 chr2R 9561798 3` UTR,intron CR45281 -,CG1809 + chr2R 9561886 3` UTR,intron CR45281 -,CG1809 + chr2R 9561975 3` UTR,intron CR45281 -,CG1809 + chr2R_7_9560001 chr2R_9560001 RAL-373_125b 980 chr2R 9672002 9672080 chr2R 9672158 9672219 11 154 2.0 3.5 2.8 2.9 217 chr2R 9672002 intron Mmp2 - chr2R 9672110 intron Mmp2 - chr2R 9672219 intron Mmp2 - chr2R_11_9670001 chr2R_9670001 RAL-373_125b 981 chr2R 9699369 9699440 chr2R 9699495 9699552 16 126 4.5 4.5 4.5 2.9 183 chr2R 9699369 intergenic not near genes chr2R 9699460 intergenic not near genes chr2R 9699552 intergenic not near genes chr2R_16_9695001 chr2R_9695001 RAL-373_125b 982 chr2R 9726578 9726634 chr2R 9734179 9734235 17.6 15 7600 6.5 10.0 8.2 1.6 7657 chr2R 9726578 intron sqa - chr2R 9730406 intron sqa - chr2R 9734235 intron sqa - chr2R_15_9730001 chr2R_9730001 RAL-373_125b 983 chr2R 9793573 9793628 chr2R 9793952 9794007 12 378 8.0 3.0 5.5 1.8 434 chr2R 9793573 intron,intron CG1688 -,CG1698 + chr2R 9793790 intron,intron CG1688 -,CG1698 + chr2R 9794007 intron,intron CG1688 -,CG1698 + chr2R_12_9790001 chr2R_9790001 RAL-373_125b 984 chr2R 9870996 9871068 chr2R 9871532 9871574 roo 18 527 5.5 8.0 6.8 2.3 578 chr2R 9870996 intron cbx - chr2R 9871285 intron cbx - chr2R 9871574 intron,5` UTR cbx -,CG18446 + chr2R_18_9870001 chr2R_9870001 RAL-373_125b 985 chr2R 9896770 9896843 chr2R 9896948 9897021 16 174 4.0 5.5 4.8 2.8 251 chr2R 9896770 exon CG30007 + chr2R 9896896 exon CG30007 + chr2R 9897021 exon CG30007 + chr2R_16_9895001 chr2R_9895001 RAL-373_125b 986 chr2R 9921160 9921168 chr2R 9921340 9921343 4 179 5.0 10.5 7.8 0.5 183 chr2R 9921160 intron Mef2 - chr2R 9921252 intron Mef2 - chr2R 9921343 intron Mef2 - chr2R_4_9920001 chr2R_9920001 RAL-373_125b 987 chr2R 9950258 9950324 chr2R 9950380 9950441 12 122 7.0 5.0 6.0 1.7 183 chr2R 9950258 intron Mef2 - chr2R 9950350 intron Mef2 - chr2R 9950441 intron Mef2 - chr2R_12_9950001 chr2R_9950001 RAL-373_125b 988 chr2R 9998023 9998089 chr2R 9998166 9998223 8 142 3.5 3.0 3.2 1.9 200 chr2R 9998023 intron Pka-R2 - chr2R 9998123 intron Pka-R2 - chr2R 9998223 intron Pka-R2 - chr2R_8_9995001 chr2R_9995001 RAL-373_125b 989 chr2R 10005512 10005584 chr2R 10005659 10005731 12 147 4.5 5.5 5.0 2.0 219 chr2R 10005512 intron Pka-R2 - chr2R 10005622 intron Pka-R2 - chr2R 10005731 intron Pka-R2 - chr2R_12_10005001 chr2R_10005001 RAL-373_125b 990 chr2R 10005826 10005878 chr2R 10007018 10007057 1360 16 1199 5.0 5.0 5.0 2.7 1231 chr2R 10005826 intron Pka-R2 - chr2R 10006442 intron Pka-R2 - chr2R 10007057 intron Pka-R2 - chr2R_16_10005001 chr2R_10005001 RAL-373_125b 991 chr2R 10008562 10008585 chr2R 10008656 10008723 6 126 0.0 0.0 0.0 6.0 161 chr2R 10008562 intron Pka-R2 - chr2R 10008642 intron Pka-R2 - chr2R 10008723 intron Pka-R2 - chr2R_6_10005001 chr2R_10005001 RAL-373_125b 992 chr2R 10171073 10171139 chr2R 10171207 10171273 10 134 0.0 7.0 3.5 2.2 200 chr2R 10171073 intron KCNQ - chr2R 10171173 intron KCNQ - chr2R 10171273 intron KCNQ - chr2R_10_10170001 chr2R_10170001 RAL-373_125b 993 chr2R 10172300 10172339 chr2R 10172861 10172888 13 558 4.0 4.0 4.0 2.6 588 chr2R 10172300 intron KCNQ - chr2R 10172594 intron KCNQ - chr2R 10172888 intron KCNQ - chr2R_13_10170001 chr2R_10170001 RAL-373_125b 994 chr2R 10176840 10176894 chr2R 10186057 10186111 roo 15 9217 6.5 6.5 6.5 2.0 9271 chr2R 10176840 intron KCNQ - chr2R 10181476 intron KCNQ - chr2R 10186111 intron KCNQ - chr2R_15_10180001 chr2R_10180001 RAL-373_125b 995 chr2R 10214517 10214535 chr2R 10214684 10214690 6 165 17.0 10.5 13.8 0.4 173 chr2R 10214517 intron,intron CG12912 -,Hr46 - chr2R 10214604 intron,intron CG12912 -,Hr46 - chr2R 10214690 intron,intron CG12912 -,Hr46 - chr2R_6_10210001 chr2R_10210001 RAL-373_125b 996 chr2R 10257121 10257174 chr2R 10257262 10257310 15 140 3.0 0.0 1.5 6.0 189 chr2R 10257121 intron CG12911 + chr2R 10257216 intron CG12911 + chr2R 10257310 intron CG12911 + chr2R_15_10255001 chr2R_10255001 RAL-373_125b 997 chr2R 10269526 10269591 chr2R 10269670 10269715 19 139 8.0 11.5 9.8 1.8 189 chr2R 10269526 intron CAP + chr2R 10269620 intron CAP + chr2R 10269715 intron CAP + chr2R_19_10265001 chr2R_10265001 RAL-373_125b 998 chr2R 10274773 10274812 chr2R 10274899 10274933 10 123 13.0 1.5 7.2 1.2 160 chr2R 10274773 intron CAP + chr2R 10274853 intron CAP + chr2R 10274933 intron CAP + chr2R_10_10270001 chr2R_10270001 RAL-373_125b 999 chr2R 10313301 10313339 chr2R 10313420 10313476 13 140 4.0 1.0 2.5 3.7 175 chr2R 10313301 intergenic not near genes chr2R 10313388 intergenic not near genes chr2R 10313476 intergenic Ndg + chr2R_13_10310001 chr2R_10310001 RAL-373_125b 1000 chr2R 10318472 10318532 chr2R 10318608 10318663 13 134 8.5 7.0 7.8 1.5 191 chr2R 10318472 intron Ndg + chr2R 10318568 intron Ndg + chr2R 10318663 intron Ndg + chr2R_13_10315001 chr2R_10315001 RAL-373_125b 1001 chr2R 10322029 10322078 chr2R 10322161 10322210 12 131 5.5 7.5 6.5 1.6 181 chr2R 10322029 3` UTR Ndg + chr2R 10322120 intergenic Ndg + chr2R 10322210 intergenic Ndg + chr2R_12_10320001 chr2R_10320001 RAL-373_125b 1002 chr2R 10349875 10349939 chr2R 10349998 10350024 12 112 3.5 4.0 3.8 2.5 149 chr2R 10349875 intron CG42732 - chr2R 10349950 intron CG42732 - chr2R 10350024 intron CG42732 - chr2R_12_10345001 chr2R_10345001 RAL-373_125b 1003 chr2R 10352639 10352692 chr2R 10352765 10352819 20 120 4.0 7.0 5.5 3.1 180 chr2R 10352639 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352729 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352819 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_20_10350001 chr2R_10350001 RAL-373_125b 1004 chr2R 10370388 10370403 chr2R 10370613 10370628 4 224 11.5 0.0 5.8 0.6 240 chr2R 10370388 intron CG42732 - chr2R 10370508 intron CG42732 - chr2R 10370628 intron CG42732 - chr2R_4_10370001 chr2R_10370001 RAL-373_125b 1005 chr2R 10409015 10409073 chr2R 10409140 10409184 15 124 0.0 0.0 0.0 15.0 169 chr2R 10409015 intron CG42732 - chr2R 10409100 intron CG42732 - chr2R 10409184 intron,exon CG42732 -,CG33477 - chr2R_15_10405001 chr2R_10405001 RAL-373_125b 1006 chr2R 10454056 10454125 chr2R 10454183 10454246 31 124 7.5 5.5 6.5 4.1 190 chr2R 10454056 intron,intron Galphao +,Cyp49a1 - chr2R 10454151 intron,intron Galphao +,Cyp49a1 - chr2R 10454246 intron,intron Galphao +,Cyp49a1 - chr2R_31_10450001 chr2R_10450001 RAL-373_125b 1007 chr2R 10468979 10469051 chr2R 10469155 10469227 22 173 4.5 5.0 4.8 3.8 248 chr2R 10468979 intron CG11777 + chr2R 10469103 intron CG11777 + chr2R 10469227 exon CG11777 + chr2R_22_10465001 chr2R_10465001 RAL-373_125b 1008 chr2R 10563203 10563250 chr2R 10563351 10563398 5 148 0.0 7.5 3.8 1.0 195 chr2R 10563203 intron psq + chr2R 10563300 intron psq + chr2R 10563398 intron psq + chr2R_5_10560001 chr2R_10560001 RAL-373_125b 1009 chr2R 10571977 10572034 chr2R 10572204 10572271 12 235 5.0 7.0 6.0 1.7 294 chr2R 10571977 intron psq + chr2R 10572124 intron psq + chr2R 10572271 intron psq + chr2R_12_10570001 chr2R_10570001 RAL-373_125b 1010 chr2R 10644027 10644051 chr2R 10644150 10644179 7 127 10.0 0.0 5.0 1.2 152 chr2R 10644027 intron Git - chr2R 10644103 intron Git - chr2R 10644179 intron Git - chr2R_7_10640001 chr2R_10640001 RAL-373_125b 1011 chr2R 10669800 10669851 chr2R 10669910 10669990 4 126 5.0 0.0 2.5 1.1 190 chr2R 10669800 intergenic not near genes chr2R 10669895 intergenic not near genes chr2R 10669990 intergenic not near genes chr2R_4_10665001 chr2R_10665001 RAL-373_125b 1012 chr2R 10671223 10671254 chr2R 10671334 10671350 4 111 12.5 0.0 6.2 0.6 127 chr2R 10671223 intergenic not near genes chr2R 10671286 intergenic not near genes chr2R 10671350 intergenic not near genes chr2R_4_10670001 chr2R_10670001 RAL-373_125b 1013 chr2R 10700485 10700516 chr2R 10700634 10700676 5 160 3.5 8.5 6.0 0.7 191 chr2R 10700485 intron stan + chr2R 10700580 intron stan + chr2R 10700676 intron stan + chr2R_5_10700001 chr2R_10700001 RAL-373_125b 1014 chr2R 10770960 10771025 chr2R 10771078 10771148 14 125 2.5 6.5 4.5 2.5 188 chr2R 10770960 intron CG33144 - chr2R 10771054 intron CG33144 - chr2R 10771148 intron CG33144 - chr2R_14_10770001 chr2R_10770001 RAL-373_125b 1015 chr2R 10827283 10827347 chr2R 10827421 10827465 27 136 5.5 6.5 6.0 3.9 182 chr2R 10827283 exon CG12325 + chr2R 10827374 exon CG12325 + chr2R 10827465 3` UTR,3` UTR CG12325 +,CG12344 - chr2R_27_10825001 chr2R_10825001 RAL-373_125b 1016 chr2R 10862529 10862591 chr2R 10862690 10862752 14 158 4.5 7.5 6.0 2.0 223 chr2R 10862529 intron CG30015 - chr2R 10862640 intron CG30015 - chr2R 10862752 intron CG30015 - chr2R_14_10860001 chr2R_10860001 RAL-373_125b 1017 chr2R 10873302 10873375 chr2R 10873439 10873512 11 136 3.0 4.0 3.5 2.4 210 chr2R 10873302 intron CG30015 - chr2R 10873407 intron CG30015 - chr2R 10873512 intron CG30015 - chr2R_11_10870001 chr2R_10870001 RAL-373_125b 1018 chr2R 10937745 10937827 chr2R 10937939 10938015 6 181 0.0 8.0 4.0 1.2 270 chr2R 10937745 intergenic not near genes chr2R 10937880 intergenic not near genes chr2R 10938015 intergenic Spn47C - chr2R_6_10935001 chr2R_10935001 RAL-373_125b 1019 chr2R 10948028 10948055 chr2R 10955614 10955644 17.6 5 7592 0.5 9.0 4.8 0.9 7616 chr2R 10948028 intergenic not near genes chr2R 10951836 intergenic not near genes chr2R 10955644 intergenic not near genes chr2R_5_10950001 chr2R_10950001 RAL-373_125b 1020 chr2R 10959042 10959101 chr2R 10959171 10959208 16 125 0.0 8.0 4.0 3.2 166 chr2R 10959042 intergenic not near genes chr2R 10959125 intergenic not near genes chr2R 10959208 intergenic not near genes chr2R_16_10955001 chr2R_10955001 RAL-373_125b 1021 chr2R 10979622 10979669 chr2R 10980127 10980176 297 10 502 5.5 2.0 3.8 2.1 554 chr2R 10979622 intergenic not near genes chr2R 10979899 intergenic not near genes chr2R 10980176 intergenic not near genes chr2R_10_10975001 chr2R_10975001 RAL-373_125b 1022 chr2R 11009774 11009848 chr2R 11018998 11019032 roo 17 9214 5.0 7.0 6.0 2.4 9258 chr2R 11009774 intron luna - chr2R 11014403 intron luna - chr2R 11019032 intron luna - chr2R_17_11010001 chr2R_11010001 RAL-373_125b 1023 chr2R 11019834 11019896 chr2R 11024950 11024985 jockey 6 5110 6.5 5.5 6.0 0.9 5151 chr2R 11019834 intron luna - chr2R 11022410 intron luna - chr2R 11024985 intron luna - chr2R_6_11020001 chr2R_11020001 RAL-373_125b 1024 chr2R 11067235 11067297 chr2R 11067397 11067448 17 164 3.0 4.0 3.5 3.8 213 chr2R 11067235 intron luna - chr2R 11067342 intron luna - chr2R 11067448 intron luna - chr2R_17_11065001 chr2R_11065001 RAL-373_125b 1025 chr2R 11081056 11081074 chr2R 11081153 11081181 6 109 15.0 13.5 14.2 0.4 125 chr2R 11081056 intron luna - chr2R 11081118 intron luna - chr2R 11081181 intron luna - chr2R_6_11080001 chr2R_11080001 RAL-373_125b 1026 chr2R 11179222 11179274 chr2R 11179358 11179390 15 130 10.0 4.5 7.2 1.8 168 chr2R 11179222 intron shn + chr2R 11179306 intron shn + chr2R 11179390 intron shn + chr2R_15_11175001 chr2R_11175001 RAL-373_125b 1027 chr2R 11188618 11188671 chr2R 11188751 11188806 9 134 7.0 0.0 3.5 2.0 188 chr2R 11188618 intron shn + chr2R 11188712 intron shn + chr2R 11188806 intron shn + chr2R_9_11185001 chr2R_11185001 RAL-373_125b 1028 chr2R 11207790 11207835 chr2R 11208020 11208077 BS 7 234 8.5 13.0 10.8 0.6 287 chr2R 11207790 intron shn + chr2R 11207934 intron shn + chr2R 11208077 intron shn + chr2R_7_11205001 chr2R_11205001 RAL-373_125b 1029 chr2R 11265679 11265693 chr2R 11265811 11265815 4 128 10.5 0.0 5.2 0.6 136 chr2R 11265679 exon Cpr47Ee + chr2R 11265747 exon Cpr47Ee + chr2R 11265815 intron Cpr47Ee + chr2R_4_11265001 chr2R_11265001 RAL-373_125b 1030 chr2R 11292931 11292999 chr2R 11293050 11293132 19 133 2.0 0.0 1.0 9.5 201 chr2R 11292931 exon,3` UTR dare -,CG30033 + chr2R 11293032 5` UTR,3` UTR dare -,CG30033 + chr2R 11293132 5` UTR,3` UTR dare -,CG30033 + chr2R_19_11290001 chr2R_11290001 RAL-373_125b 1031 chr2R 11297608 11297636 chr2R 11301972 11302005 flea 9 4370 5.0 1.5 3.2 2.1 4397 chr2R 11297608 intergenic CG42336 - chr2R 11299806 intergenic not near genes chr2R 11302005 5` UTR CG7741 + chr2R_9_11295001 chr2R_11295001 RAL-373_125b 1032 chr2R 11336544 11336606 chr2R 11336676 11336739 25 128 6.5 9.0 7.8 2.8 195 chr2R 11336544 intergenic sha +,lambdaTry + chr2R 11336642 intergenic sha +,lambdaTry + chr2R 11336739 intergenic lambdaTry +,sha + chr2R_25_11335001 chr2R_11335001 RAL-373_125b 1033 chr2R 11344102 11344158 chr2R 11344248 11344299 10 144 0.0 4.0 2.0 3.3 197 chr2R 11344102 intergenic alphaTry - chr2R 11344200 intergenic alphaTry - chr2R 11344299 3` UTR alphaTry - chr2R_10_11340001 chr2R_11340001 RAL-373_125b 1034 chr2R 11368010 11368040 chr2R 11368136 11368166 9 123 6.0 8.5 7.2 1.1 156 chr2R 11368010 intron CG13204 + chr2R 11368088 intron CG13204 + chr2R 11368166 intron CG13204 + chr2R_9_11365001 chr2R_11365001 RAL-373_125b 1035 chr2R 11415529 11415551 chr2R 11418677 11418725 opus 7 3184 7.5 6.0 6.8 0.9 3196 chr2R 11415529 intron Drip - chr2R 11417127 intron Drip - chr2R 11418725 intron Drip - chr2R_7_11415001 chr2R_11415001 RAL-373_125b 1036 chr2R 11472606 11472669 chr2R 11473853 11473916 pogo 17 1244 6.5 3.5 5.0 2.8 1310 chr2R 11472606 intergenic not near genes chr2R 11473261 intergenic not near genes chr2R 11473916 intergenic not near genes chr2R_17_11470001 chr2R_11470001 RAL-373_125b 1037 chr2R 11480784 11480822 chr2R 11480917 11480955 7 133 1.5 7.5 4.5 1.3 171 chr2R 11480784 intron inv + chr2R 11480870 intron inv + chr2R 11480955 intron inv + chr2R_7_11480001 chr2R_11480001 RAL-373_125b 1038 chr2R 11494563 11494596 chr2R 11494702 11494735 16 134 8.5 8.0 8.2 1.7 172 chr2R 11494563 intron inv + chr2R 11494649 intron inv + chr2R 11494735 intron inv + chr2R_16_11490001 chr2R_11490001 RAL-373_125b 1039 chr2R 11494597 11494629 chr2R 11494685 11494766 10 131 5.0 5.5 5.2 1.6 169 chr2R 11494597 intron inv + chr2R 11494682 intron inv + chr2R 11494766 intron inv + chr2R_10_11490001 chr2R_11490001 RAL-373_125b 1040 chr2R 11555349 11555423 chr2R 11555734 11555808 13 385 6.5 5.5 6.0 1.9 459 chr2R 11555349 intergenic not near genes chr2R 11555578 intergenic not near genes chr2R 11555808 intergenic not near genes chr2R_13_11555001 chr2R_11555001 RAL-373_125b 1041 chr2R 11631375 11631409 chr2R 11631499 11631539 13 128 0.0 9.5 4.8 2.2 164 chr2R 11631375 intron CG9005 - chr2R 11631457 intron CG9005 - chr2R 11631539 intron CG9005 - chr2R_13_11630001 chr2R_11630001 RAL-373_125b 1042 chr2R 11660355 11660398 chr2R 11660517 11660549 11 163 0.0 6.5 3.2 2.6 194 chr2R 11660355 intron Roc2 - chr2R 11660452 intron Roc2 - chr2R 11660549 intron Roc2 - chr2R_11_11660001 chr2R_11660001 RAL-373_125b 1043 chr2R 11681497 11681517 chr2R 11684040 11684043 7 2537 10.5 27.5 19.0 0.3 2546 chr2R 11681497 intron Buffy + chr2R 11682770 intron Buffy + chr2R 11684043 intron Buffy + chr2R_7_11680001 chr2R_11680001 RAL-373_125b 1044 chr2R 11681519 11681532 chr2R 11684037 11684063 7 2531 10.0 28.0 19.0 0.3 2544 chr2R 11681519 intron Buffy + chr2R 11682791 intron Buffy + chr2R 11684063 intron Buffy + chr2R_7_11680001 chr2R_11680001 RAL-373_125b 1045 chr2R 11681509 11681561 chr2R 11684447 11684519 11 2941 8.5 38.0 23.2 0.5 3010 chr2R 11681509 intron Buffy + chr2R 11683014 intron Buffy + chr2R 11684519 intron,exon Buffy +,CG13196 - chr2R_11_11680001 chr2R_11680001 RAL-373_125b 1046 chr2R 11724109 11724177 chr2R 11724242 11724305 11 132 4.5 3.0 3.8 2.3 196 chr2R 11724109 intron pyr + chr2R 11724207 intron pyr + chr2R 11724305 exon pyr + chr2R_11_11720001 chr2R_11720001 RAL-373_125b 1047 chr2R 11760694 11760751 chr2R 11760864 11760932 23 179 4.5 8.0 6.2 3.2 238 chr2R 11760694 intron ths + chr2R 11760813 intron ths + chr2R 11760932 intron ths + chr2R_23_11760001 chr2R_11760001 RAL-373_125b 1048 chr2R 11772661 11772713 chr2R 11772788 11772840 6 127 2.0 4.0 3.0 1.5 179 chr2R 11772661 intron ths + chr2R 11772750 intron ths + chr2R 11772840 intron ths + chr2R_6_11770001 chr2R_11770001 RAL-373_125b 1049 chr2R 11775917 11775960 chr2R 11776024 11776093 19 126 4.0 5.5 4.8 3.3 176 chr2R 11775917 intron ths + chr2R 11776005 intron ths + chr2R 11776093 intron ths + chr2R_19_11775001 chr2R_11775001 RAL-373_125b 1050 chr2R 11797021 11797102 chr2R 11797231 11797308 11 207 3.5 8.0 5.8 1.6 287 chr2R 11797021 intron ths + chr2R 11797164 intron ths + chr2R 11797308 intron ths + chr2R_11_11795001 chr2R_11795001 RAL-373_125b 1051 chr2R 11810057 11810085 chr2R 11810157 11810201 5 112 12.0 11.5 11.8 0.4 144 chr2R 11810057 exon ths + chr2R 11810129 exon ths + chr2R 11810201 exon ths + chr2R_5_11810001 chr2R_11810001 RAL-373_125b 1052 chr2R 11934037 11934101 chr2R 11934169 11934228 25 128 6.0 5.0 5.5 3.8 191 chr2R 11934037 intergenic not near genes chr2R 11934132 intergenic not near genes chr2R 11934228 intergenic not near genes chr2R_25_11930001 chr2R_11930001 RAL-373_125b 1053 chr2R 11945836 11945904 chr2R 11945963 11946031 13 122 3.5 3.0 3.2 3.1 195 chr2R 11945836 intron CG13188 + chr2R 11945934 intron CG13188 + chr2R 11946031 intron CG13188 + chr2R_13_11945001 chr2R_11945001 RAL-373_125b 1054 chr2R 11951301 11951354 chr2R 11951423 11951481 12 124 7.5 1.5 4.5 2.2 180 chr2R 11951301 intron CG13188 + chr2R 11951391 intron CG13188 + chr2R 11951481 intron CG13188 + chr2R_12_11950001 chr2R_11950001 RAL-373_125b 1055 chr2R 12087197 12087273 chr2R 12087328 12087404 6 121 6.5 7.0 6.8 0.8 207 chr2R 12087197 3` UTR jeb - chr2R 12087300 3` UTR jeb - chr2R 12087404 3` UTR jeb - chr2R_6_12085001 chr2R_12085001 RAL-373_125b 1056 chr2R 12093904 12093965 chr2R 12094067 12094123 10 160 3.0 4.5 3.8 2.1 219 chr2R 12093904 intron jeb - chr2R 12094014 intron jeb - chr2R 12094123 intron jeb - chr2R_10_12090001 chr2R_12090001 RAL-373_125b 1057 chr2R 12108059 12108069 chr2R 12108209 12108224 5 154 8.0 0.0 4.0 1.0 165 chr2R 12108059 intron jeb - chr2R 12108142 intron jeb - chr2R 12108224 intron jeb - chr2R_5_12105001 chr2R_12105001 RAL-373_125b 1058 chr2R 12146432 12146438 chr2R 12147604 12147607 4 1171 40.0 36.5 38.2 0.1 1175 chr2R 12146432 intron,3` UTR Hen1 +,CG8878 - chr2R 12147020 intron,exon Hen1 +,CG8878 - chr2R 12147607 intron,exon Hen1 +,CG8878 - chr2R_4_12145001 chr2R_12145001 RAL-373_125b 1059 chr2R 12146445 12146488 chr2R 12147596 12147644 10 1160 37.0 35.5 36.2 0.3 1199 chr2R 12146445 intron,3` UTR Hen1 +,CG8878 - chr2R 12147044 intron,exon Hen1 +,CG8878 - chr2R 12147644 intron,exon Hen1 +,CG8878 - chr2R_10_12145001 chr2R_12145001 RAL-373_125b 1060 chr2R 12145922 12145982 chr2R 12148569 12148638 14 2649 50.5 44.5 47.5 0.3 2716 chr2R 12145922 exon Hen1 + chr2R 12147280 intron,intron Hen1 +,CG8878 - chr2R 12148638 intron,exon Hen1 +,CG8878 - chr2R_14_12145001 chr2R_12145001 RAL-373_125b 1061 chr2R 12185961 12186029 chr2R 12186106 12186173 22 140 8.0 10.5 9.2 2.2 212 chr2R 12185961 intron Cyp6g1 + chr2R 12186067 intron Cyp6g1 + chr2R 12186173 intron Cyp6g1 + chr2R_22_12185001 chr2R_12185001 RAL-373_125b 1062 chr2R 12185221 12185256 chr2R 12188111 12188131 11 2882 33.0 126.5 79.8 0.1 2910 chr2R 12185221 3` UTR,exon CG13175 +,CG33964 + chr2R 12186676 exon Cyp6g1 + chr2R 12188131 exon Cyp6g1 + chr2R_11_12185001 chr2R_12185001 RAL-373_125b 1063 chr2R 12187476 12187545 chr2R 12190052 12190122 41 2574 88.5 75.0 81.8 0.5 2646 chr2R 12187476 exon Cyp6g1 + chr2R 12188799 exon Cyp6g2 - chr2R 12190122 exon Cyp6g2 - chr2R_41_12185001 chr2R_12185001 RAL-373_125b 1064 chr2R 12210105 12210154 chr2R 12210215 12210285 19 128 6.0 7.5 6.8 2.4 180 chr2R 12210105 exon Sr-CII - chr2R 12210195 intron Sr-CII - chr2R 12210285 exon Sr-CII - chr2R_19_12210001 chr2R_12210001 RAL-373_125b 1065 chr2R 12284268 12284327 chr2R 12284402 12284456 13 130 0.5 5.0 2.8 3.4 188 chr2R 12284268 intron CG42700 + chr2R 12284362 intron CG42700 + chr2R 12284456 intron CG42700 + chr2R_13_12280001 chr2R_12280001 RAL-373_125b 1066 chr2R 12285338 12285372 chr2R 12285485 12285519 7 146 10.0 0.0 5.0 1.2 181 chr2R 12285338 intron CG42700 + chr2R 12285428 intron CG42700 + chr2R 12285519 intron CG42700 + chr2R_7_12285001 chr2R_12285001 RAL-373_125b 1067 chr2R 12294722 12294797 chr2R 12294859 12294934 18 134 7.0 5.5 6.2 2.5 212 chr2R 12294722 intron CG42700 + chr2R 12294828 intron CG42700 + chr2R 12294934 intron CG42700 + chr2R_18_12290001 chr2R_12290001 RAL-373_125b 1068 chr2R 12481158 12481170 chr2R 12482987 12482995 roo 4 1826 2.0 8.5 5.2 0.6 1837 chr2R 12481158 exon Dh44-R2 + chr2R 12482076 intron Dh44-R2 + chr2R 12482995 intron Dh44-R2 + chr2R_4_12480001 chr2R_12480001 RAL-373_125b 1069 chr2R 12484339 12484422 chr2R 12484473 12484556 16 133 8.5 3.0 5.8 2.4 217 chr2R 12484339 intron Dh44-R2 + chr2R 12484448 intron Dh44-R2 + chr2R 12484556 exon Dh44-R2 + chr2R_16_12480001 chr2R_12480001 RAL-373_125b 1070 chr2R 12501654 12501661 chr2R 12503866 12503872 Rt1c 4 2210 9.5 7.5 8.5 0.4 2218 chr2R 12501654 intron fdl - chr2R 12502763 intron fdl - chr2R 12503872 intron fdl - chr2R_4_12500001 chr2R_12500001 RAL-373_125b 1071 chr2R 12501664 12501701 chr2R 12503865 12503911 Rt1c 12 2202 5.0 7.5 6.2 1.7 2247 chr2R 12501664 intron fdl - chr2R 12502788 intron fdl - chr2R 12503911 intron fdl - chr2R_12_12500001 chr2R_12500001 RAL-373_125b 1072 chr2R 12522395 12522406 chr2R 12522529 12522540 4 134 9.5 14.0 11.8 0.3 145 chr2R 12522395 exon CG33632 + chr2R 12522468 exon CG33632 + chr2R 12522540 intron CG33632 + chr2R_4_12520001 chr2R_12520001 RAL-373_125b 1073 chr2R 12522410 12522442 chr2R 12522524 12522576 9 131 6.0 13.0 9.5 0.9 166 chr2R 12522410 exon CG33632 + chr2R 12522493 exon CG33632 + chr2R 12522576 exon CG33632 + chr2R_9_12520001 chr2R_12520001 RAL-373_125b 1074 chr2R 12522443 12522458 chr2R 12522520 12522550 10 118 3.5 12.0 7.8 1.1 107 chr2R 12522443 exon CG33632 + chr2R 12522496 exon CG33632 + chr2R 12522550 intron CG33632 + chr2R_10_12520001 chr2R_12520001 RAL-373_125b 1075 chr2R 12529858 12529936 chr2R 12530001 12530079 11 139 3.5 1.0 2.2 3.4 221 chr2R 12529858 intron fra + chr2R 12529968 intron fra + chr2R 12530079 intron fra + chr2R_11_12525001 chr2R_12525001 RAL-373_125b 1076 chr2R 12548479 12548548 chr2R 12548601 12548675 11 124 0.0 5.0 2.5 3.1 196 chr2R 12548479 intron fra + chr2R 12548577 intron fra + chr2R 12548675 intron fra + chr2R_11_12545001 chr2R_12545001 RAL-373_125b 1077 chr2R 12565513 12565587 chr2R 12565943 12565986 8 403 0.0 3.0 1.5 3.2 473 chr2R 12565513 intergenic not near genes chr2R 12565750 intergenic Cyp301a1 + chr2R 12565986 intergenic Cyp301a1 + chr2R_8_12565001 chr2R_12565001 RAL-373_125b 1078 chr2R 12670322 12670396 chr2R 12670479 12670555 4 158 5.5 0.0 2.8 1.1 233 chr2R 12670322 intergenic nemy -,CG42708 - chr2R 12670438 intergenic CG42708 -,nemy - chr2R 12670555 3` UTR CG42708 - chr2R_4_12670001 chr2R_12670001 RAL-373_125b 1079 chr2R 12700768 12700786 chr2R 12700912 12700919 6 142 11.5 1.5 6.5 0.8 151 chr2R 12700768 exon wuc + chr2R 12700844 3` UTR wuc + chr2R 12700919 intergenic wuc + chr2R_6_12700001 chr2R_12700001 RAL-373_125b 1080 chr2R 12700792 12700843 chr2R 12700908 12700987 17 125 2.5 1.5 2.0 5.7 195 chr2R 12700792 3` UTR wuc + chr2R 12700890 intergenic wuc + chr2R 12700987 intergenic wuc + chr2R_17_12700001 chr2R_12700001 RAL-373_125b 1081 chr2R 12702274 12702347 chr2R 12702405 12702474 18 128 6.0 4.5 5.2 2.9 200 chr2R 12702274 intergenic not near genes chr2R 12702374 intergenic not near genes chr2R 12702474 intergenic not near genes chr2R_18_12700001 chr2R_12700001 RAL-373_125b 1082 chr2R 12707472 12707544 chr2R 12715888 12715955 roo 7 8415 0.5 2.0 1.2 3.2 8483 chr2R 12707472 intron CG42663 + chr2R 12711714 intron CG42663 + chr2R 12715955 intron CG42663 + chr2R_7_12710001 chr2R_12710001 RAL-373_125b 1083 chr2R 12728823 12728858 chr2R 12729009 12729056 5 193 0.0 8.5 4.2 1.0 233 chr2R 12728823 intron CG42663 + chr2R 12728940 intron CG42663 + chr2R 12729056 intron CG42663 + chr2R_5_12725001 chr2R_12725001 RAL-373_125b 1084 chr2R 12734019 12734088 chr2R 12734148 12734216 14 120 4.0 9.5 6.8 1.8 197 chr2R 12734019 intron CG42663 + chr2R 12734118 intron CG42663 + chr2R 12734216 intron CG42663 + chr2R_14_12730001 chr2R_12730001 RAL-373_125b 1085 chr2R 12777761 12777826 chr2R 12777913 12777985 7 154 0.0 2.5 1.2 3.2 224 chr2R 12777761 5` UTR CR45266 + chr2R 12777873 5` UTR CR45266 + chr2R 12777985 5` UTR CR45266 + chr2R_7_12775001 chr2R_12775001 RAL-373_125b 1086 chr2R 12789259 12789320 chr2R 12797667 12797690 roo 14 8398 5.0 7.5 6.2 1.9 8431 chr2R 12789259 intron,3` UTR sca +,CR45137 - chr2R 12793474 intron,intron sca +,CR45137 - chr2R 12797690 intron,3` UTR sca +,CR45137 - chr2R_14_12790001 chr2R_12790001 RAL-373_125b 1087 chr2R 12808290 12808347 chr2R 12808420 12808474 9 140 4.5 5.5 5.0 1.5 184 chr2R 12808290 intergenic CG17580 + chr2R 12808382 intergenic not near genes chr2R 12808474 intergenic not near genes chr2R_9_12805001 chr2R_12805001 RAL-373_125b 1088 chr2R 12819406 12819471 chr2R 12824526 12824593 jockey 8 5120 6.0 5.0 5.5 1.2 5187 chr2R 12819406 intergenic not near genes chr2R 12822000 intergenic not near genes chr2R 12824593 intergenic not near genes chr2R_8_12820001 chr2R_12820001 RAL-373_125b 1089 chr2R 12836337 12836406 chr2R 12836474 12836543 17 136 7.5 3.5 5.5 2.6 206 chr2R 12836337 intergenic not near genes chr2R 12836440 intergenic not near genes chr2R 12836543 intergenic not near genes chr2R_17_12835001 chr2R_12835001 RAL-373_125b 1090 chr2R 12845411 12845426 chr2R 12845538 12845552 7 126 5.0 5.5 5.2 1.1 141 chr2R 12845411 intergenic CG17575 - chr2R 12845482 intergenic CG17575 - chr2R 12845552 3` UTR CG17575 - chr2R_7_12845001 chr2R_12845001 RAL-373_125b 1091 chr2R 13020226 13020305 chr2R 13020362 13020441 10 133 5.5 1.0 3.2 2.4 215 chr2R 13020226 intergenic not near genes chr2R 13020334 intergenic not near genes chr2R 13020441 intergenic not near genes chr2R_10_13020001 chr2R_13020001 RAL-373_125b 1092 chr2R 13027699 13027733 chr2R 13027828 13027862 9 129 5.0 1.5 3.2 2.1 163 chr2R 13027699 intergenic not near genes chr2R 13027780 intergenic not near genes chr2R 13027862 intergenic not near genes chr2R_9_13025001 chr2R_13025001 RAL-373_125b 1093 chr2R 13054594 13054645 chr2R 13054847 13054903 11 252 0.0 8.5 4.2 2.1 309 chr2R 13054594 intergenic not near genes chr2R 13054748 intergenic Drl-2 - chr2R 13054903 intergenic Drl-2 - chr2R_11_13050001 chr2R_13050001 RAL-373_125b 1094 chr2R 13089734 13089766 chr2R 13089877 13089904 10 146 7.5 8.5 8.0 1.1 170 chr2R 13089734 intergenic not near genes chr2R 13089819 intergenic not near genes chr2R 13089904 intergenic not near genes chr2R_10_13085001 chr2R_13085001 RAL-373_125b 1095 chr2R 13129155 13129220 chr2R 13129283 13129336 12 125 1.5 0.0 0.8 6.7 181 chr2R 13129155 intergenic CG3955 -,CG13326 - chr2R 13129246 intergenic CG3955 -,CG13326 - chr2R 13129336 intergenic CG13326 -,CG3955 - chr2R_12_13125001 chr2R_13125001 RAL-373_125b 1096 chr2R 13136804 13136863 chr2R 13141640 13141701 Doc 18 4842 9.5 5.5 7.5 2.1 4897 chr2R 13136804 exon Cap-G + chr2R 13139252 intron Cap-G + chr2R 13141701 intron Cap-G + chr2R_18_13135001 chr2R_13135001 RAL-373_125b 1097 chr2R 13167155 13167209 chr2R 13169451 13169520 18 2301 39.5 30.0 34.8 0.5 2365 chr2R 13167155 intron GLaz - chr2R 13168338 intergenic Spt-I +,CR45142 -,GLaz - chr2R 13169520 exon,3` UTR Spt-I +,CR45142 - chr2R_18_13165001 chr2R_13165001 RAL-373_125b 1098 chr2R 13170676 13170751 chr2R 13170810 13170890 19 138 3.0 4.0 3.5 4.2 214 chr2R 13170676 3` UTR,3` UTR Spt-I +,CR45142 - chr2R 13170783 intergenic CR45142 -,Spt-I + chr2R 13170890 intergenic CR45142 -,Spt-I + chr2R_19_13170001 chr2R_13170001 RAL-373_125b 1099 chr2R 13218262 13218276 chr2R 13218395 13218404 6 131 12.0 0.0 6.0 0.9 142 chr2R 13218262 intron CG4630 - chr2R 13218333 intron CG4630 - chr2R 13218404 intron CG4630 - chr2R_6_13215001 chr2R_13215001 RAL-373_125b 1100 chr2R 13305453 13305511 chr2R 13305585 13305643 14 132 10.0 6.0 8.0 1.6 190 chr2R 13305453 intergenic not near genes chr2R 13305548 intergenic not near genes chr2R 13305643 intergenic not near genes chr2R_14_13305001 chr2R_13305001 RAL-373_125b 1101 chr2R 13309616 13309647 chr2R 13309783 13309815 8 167 6.5 2.0 4.2 1.5 199 chr2R 13309616 intergenic not near genes chr2R 13309716 intergenic not near genes chr2R 13309815 intergenic not near genes chr2R_8_13305001 chr2R_13305001 RAL-373_125b 1102 chr2R 13309649 13309659 chr2R 13309781 13309827 4 158 5.5 2.0 3.8 0.8 178 chr2R 13309649 intergenic not near genes chr2R 13309738 intergenic not near genes chr2R 13309827 intergenic not near genes chr2R_4_13305001 chr2R_13305001 RAL-373_125b 1103 chr2R 13316767 13316782 chr2R 13316921 13316942 5 157 13.0 4.5 8.8 0.5 175 chr2R 13316767 intergenic not near genes chr2R 13316854 intergenic not near genes chr2R 13316942 intergenic not near genes chr2R_5_13315001 chr2R_13315001 RAL-373_125b 1104 chr2R 13376611 13376636 chr2R 13376771 13376792 10 158 2.5 7.0 4.8 1.7 181 chr2R 13376611 intron CG10814 - chr2R 13376702 intron CG10814 - chr2R 13376792 intron CG10814 - chr2R_10_13375001 chr2R_13375001 RAL-373_125b 1105 chr2R 13403898 13403924 chr2R 13404006 13404059 5 130 7.0 0.5 3.8 1.0 161 chr2R 13403898 intergenic not near genes chr2R 13403978 intergenic not near genes chr2R 13404059 intergenic not near genes chr2R_5_13400001 chr2R_13400001 RAL-373_125b 1106 chr2R 13438871 13438945 chr2R 13440139 13440213 18 1271 25.0 51.5 38.2 0.5 1342 chr2R 13438871 5` UTR CG42321 - chr2R 13439542 3` UTR cnn - chr2R 13440213 exon cnn - chr2R_18_13435001 chr2R_13435001 RAL-373_125b 1107 chr2R 13464424 13464498 chr2R 13464605 13464679 24 176 9.0 5.0 7.0 3.0 255 chr2R 13464424 intron arr - chr2R 13464552 intron arr - chr2R 13464679 intron arr - chr2R_24_13460001 chr2R_13460001 RAL-373_125b 1108 chr2R 13532469 13532518 chr2R 13532635 13532683 10 165 5.5 4.5 5.0 1.7 214 chr2R 13532469 intron Vmat - chr2R 13532576 intron Vmat - chr2R 13532683 intron Vmat - chr2R_10_13530001 chr2R_13530001 RAL-373_125b 1109 chr2R 13544528 13544530 chr2R 13544654 13544656 4 126 0.0 3.5 1.8 1.4 128 chr2R 13544528 intron CG6145 - chr2R 13544592 intron CG6145 - chr2R 13544656 intron CG6145 - chr2R_4_13540001 chr2R_13540001 RAL-373_125b 1110 chr2R 13544531 13544586 chr2R 13544646 13544706 10 121 1.0 2.5 1.8 3.6 175 chr2R 13544531 intron CG6145 - chr2R 13544618 intron CG6145 - chr2R 13544706 intron CG6145 - chr2R_10_13540001 chr2R_13540001 RAL-373_125b 1111 chr2R 13547032 13547103 chr2R 13547278 13547338 12 244 4.5 3.0 3.8 2.5 306 chr2R 13547032 intron CG6145 - chr2R 13547185 intron CG6145 - chr2R 13547338 intron CG6145 - chr2R_12_13545001 chr2R_13545001 RAL-373_125b 1112 chr2R 13554736 13554766 chr2R 13554871 13554893 5 133 0.0 12.0 6.0 0.7 157 chr2R 13554736 intron Roe1 + chr2R 13554814 intron Roe1 + chr2R 13554893 intron Roe1 + chr2R_5_13550001 chr2R_13550001 RAL-373_125b 1113 chr2R 13580465 13580521 chr2R 13580865 13580916 jockey 19 395 5.0 7.5 6.2 2.6 451 chr2R 13580465 3` UTR CG6191 - chr2R 13580690 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580916 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_19_13580001 chr2R_13580001 RAL-373_125b 1114 chr2R 13622175 13622192 chr2R 13622293 13622320 4 125 5.5 11.5 8.5 0.4 145 chr2R 13622175 intergenic not near genes chr2R 13622248 intergenic not near genes chr2R 13622320 intergenic not near genes chr2R_4_13620001 chr2R_13620001 RAL-373_125b 1115 chr2R 13632276 13632296 chr2R 13632406 13632424 6 131 10.5 5.5 8.0 0.7 148 chr2R 13632276 intron fas + chr2R 13632350 intron fas + chr2R 13632424 intron fas + chr2R_6_13630001 chr2R_13630001 RAL-373_125b 1116 chr2R 13635279 13635347 chr2R 13635429 13635479 14 140 3.5 3.0 3.2 3.3 200 chr2R 13635279 intron fas + chr2R 13635379 intron fas + chr2R 13635479 intron fas + chr2R_14_13635001 chr2R_13635001 RAL-373_125b 1117 chr2R 13645676 13645693 chr2R 13645805 13645822 8 128 5.5 3.5 4.5 1.5 146 chr2R 13645676 intron fas + chr2R 13645749 intron fas + chr2R 13645822 intron fas + chr2R_8_13645001 chr2R_13645001 RAL-373_125b 1118 chr2R 13648679 13648745 chr2R 13649155 13649219 16 473 1.5 3.5 2.5 4.6 540 chr2R 13648679 intron fas + chr2R 13648949 intron fas + chr2R 13649219 intron fas + chr2R_16_13645001 chr2R_13645001 RAL-373_125b 1119 chr2R 13649974 13650031 chr2R 13650119 13650176 13 145 4.5 6.5 5.5 2.0 202 chr2R 13649974 intron fas + chr2R 13650075 intron fas + chr2R 13650176 intron fas + chr2R_13_13650001 chr2R_13650001 RAL-373_125b 1120 chr2R 13668179 13668221 chr2R 13671060 13671111 10 2896 36.5 27.5 32.0 0.3 2932 chr2R 13668179 intron,exon fas +,CG18368 + chr2R 13669645 intron,exon fas +,CG18368 + chr2R 13671111 intron,exon fas +,CG18368 + chr2R_10_13665001 chr2R_13665001 RAL-373_125b 1121 chr2R 13684225 13684260 chr2R 13684353 13684372 11 126 7.0 6.0 6.5 1.5 147 chr2R 13684225 intron fas + chr2R 13684298 intron fas + chr2R 13684372 intron fas + chr2R_11_13680001 chr2R_13680001 RAL-373_125b 1122 chr2R 13709800 13709854 chr2R 13709943 13709997 15 142 3.0 0.0 1.5 6.0 197 chr2R 13709800 intron fas + chr2R 13709898 intron fas + chr2R 13709997 intron fas + chr2R_15_13705001 chr2R_13705001 RAL-373_125b 1123 chr2R 13721158 13721174 chr2R 13721291 13721292 4 128 16.5 5.5 11.0 0.3 134 chr2R 13721158 intron fas + chr2R 13721225 intron fas + chr2R 13721292 intron fas + chr2R_4_13720001 chr2R_13720001 RAL-373_125b 1124 chr2R 13721178 13721229 chr2R 13721290 13721362 17 122 5.0 5.5 5.2 2.7 184 chr2R 13721178 intron fas + chr2R 13721270 intron fas + chr2R 13721362 intron fas + chr2R_17_13720001 chr2R_13720001 RAL-373_125b 1125 chr2R 13727814 13727842 chr2R 13727950 13727973 6 133 5.0 12.0 8.5 0.6 159 chr2R 13727814 intron fas + chr2R 13727894 intron fas + chr2R 13727973 intron fas + chr2R_6_13725001 chr2R_13725001 RAL-373_125b 1126 chr2R 13728081 13728141 chr2R 13735791 13735851 opus 10 7710 3.5 6.0 4.8 1.7 7770 chr2R 13728081 intron fas + chr2R 13731966 intron fas + chr2R 13735851 intron fas + chr2R_10_13730001 chr2R_13730001 RAL-373_125b 1127 chr2R 13768948 13769001 chr2R 13769086 13769148 18 143 7.0 9.0 8.0 2.0 200 chr2R 13768948 intergenic not near genes chr2R 13769048 intergenic not near genes chr2R 13769148 intergenic not near genes chr2R_18_13765001 chr2R_13765001 RAL-373_125b 1128 chr2R 13793114 13793161 chr2R 13793223 13793280 16 117 4.0 4.0 4.0 3.2 166 chr2R 13793114 intergenic not near genes chr2R 13793197 intergenic not near genes chr2R 13793280 intergenic not near genes chr2R_16_13790001 chr2R_13790001 RAL-373_125b 1129 chr2R 13801316 13801373 chr2R 13801449 13801481 20 126 2.5 6.0 4.2 3.8 165 chr2R 13801316 intron Cpr50Cb + chr2R 13801398 intron Cpr50Cb + chr2R 13801481 intron Cpr50Cb + chr2R_20_13800001 chr2R_13800001 RAL-373_125b 1130 chr2R 13817646 13817690 chr2R 13817778 13817822 8 129 6.0 3.0 4.5 1.5 176 chr2R 13817646 intron stj + chr2R 13817734 intron stj + chr2R 13817822 intron stj + chr2R_8_13815001 chr2R_13815001 RAL-373_125b 1131 chr2R 13905563 13905629 chr2R 13907595 13907643 Rt1a 20 2026 9.5 8.5 9.0 2.0 2080 chr2R 13905563 intron shot - chr2R 13906603 intron shot - chr2R 13907643 intron shot - chr2R_20_13905001 chr2R_13905001 RAL-373_125b 1132 chr2R 13924436 13924442 chr2R 13924592 13924609 6 165 9.5 3.5 6.5 0.8 173 chr2R 13924436 intron shot - chr2R 13924522 intron shot - chr2R 13924609 intron shot - chr2R_6_13920001 chr2R_13920001 RAL-373_125b 1133 chr2R 13925805 13925860 chr2R 13926031 13926086 21 224 12.0 5.5 8.8 2.1 281 chr2R 13925805 intron shot - chr2R 13925946 intron shot - chr2R 13926086 intron shot - chr2R_21_13925001 chr2R_13925001 RAL-373_125b 1134 chr2R 13993233 13993306 chr2R 13993357 13993429 17 120 9.0 12.5 10.8 1.4 196 chr2R 13993233 intron mam + chr2R 13993331 intron mam + chr2R 13993429 intron mam + chr2R_17_13990001 chr2R_13990001 RAL-373_125b 1135 chr2R 14037231 14037299 chr2R 14037364 14037392 4 123 3.5 6.5 5.0 0.7 161 chr2R 14037231 intron mam + chr2R 14037312 intron mam + chr2R 14037392 intron mam + chr2R_4_14035001 chr2R_14035001 RAL-373_125b 1136 chr2R 14050572 14050599 chr2R 14051534 14051541 8 957 33.0 27.5 30.2 0.3 969 chr2R 14050572 intron mam + chr2R 14051056 intron mam + chr2R 14051541 intron mam + chr2R_8_14050001 chr2R_14050001 RAL-373_125b 1137 chr2R 14050804 14050843 chr2R 14050943 14050982 7 135 10.0 11.5 10.8 0.6 178 chr2R 14050804 intron mam + chr2R 14050893 intron mam + chr2R 14050982 intron mam + chr2R_7_14050001 chr2R_14050001 RAL-373_125b 1138 chr2R 14168321 14168388 chr2R 14168460 14168524 14 138 6.5 5.5 6.0 2.0 203 chr2R 14168321 intergenic CG18327 +,CG18324 + chr2R 14168422 intergenic CG18327 +,CG18324 +,CR44368 - chr2R 14168524 intergenic CG18324 +,CG18327 +,CR44368 - chr2R_14_14165001 chr2R_14165001 RAL-373_125b 1139 chr2R 14285026 14285051 chr2R 14285159 14285184 11 132 0.0 7.5 3.8 2.3 158 chr2R 14285026 intron Ih + chr2R 14285105 intron Ih + chr2R 14285184 intron Ih + chr2R_11_14285001 chr2R_14285001 RAL-373_125b 1140 chr2R 14322714 14322740 chr2R 14322854 14322880 11 137 10.0 4.5 7.2 1.3 166 chr2R 14322714 intron Shroom + chr2R 14322797 intron Shroom + chr2R 14322880 intron Shroom + chr2R_11_14320001 chr2R_14320001 RAL-373_125b 1141 chr2R 14357506 14357575 chr2R 14357646 14357705 18 136 6.0 8.0 7.0 2.2 199 chr2R 14357506 intergenic CG8617 -,Arc1 - chr2R 14357606 intergenic Arc1 -,CG8617 - chr2R 14357705 intergenic Arc1 -,CG8617 - chr2R_18_14355001 chr2R_14355001 RAL-373_125b 1142 chr2R 14389027 14389044 chr2R 14389176 14389177 5 144 7.5 5.0 6.2 0.7 150 chr2R 14389027 intergenic not near genes chr2R 14389102 intergenic not near genes chr2R 14389177 intergenic not near genes chr2R_5_14385001 chr2R_14385001 RAL-373_125b 1143 chr2R 14389054 14389094 chr2R 14389171 14389233 12 136 2.5 5.0 3.8 2.5 179 chr2R 14389054 intergenic not near genes chr2R 14389144 intergenic not near genes chr2R 14389233 intergenic not near genes chr2R_12_14385001 chr2R_14385001 RAL-373_125b 1144 chr2R 14393819 14393893 chr2R 14393954 14394028 19 129 8.0 2.5 5.2 3.1 209 chr2R 14393819 intergenic not near genes chr2R 14393924 intergenic not near genes chr2R 14394028 intergenic not near genes chr2R_19_14390001 chr2R_14390001 RAL-373_125b 1145 chr2R 14400476 14400551 chr2R 14400605 14400674 7 127 5.5 4.5 5.0 1.2 198 chr2R 14400476 intergenic not near genes chr2R 14400575 intergenic not near genes chr2R 14400674 intergenic not near genes chr2R_7_14400001 chr2R_14400001 RAL-373_125b 1146 chr2R 14424061 14424103 chr2R 14424194 14424246 7 142 3.0 5.5 4.2 1.3 185 chr2R 14424061 3` UTR CG17386 + chr2R 14424154 3` UTR CG17386 + chr2R 14424246 3` UTR CG17386 + chr2R_7_14420001 chr2R_14420001 RAL-373_125b 1147 chr2R 14467268 14467321 chr2R 14476445 14476509 roo 10 9193 3.5 8.0 5.8 1.5 9241 chr2R 14467268 intergenic not near genes chr2R 14471888 intergenic not near genes chr2R 14476509 5` UTR CR44462 + chr2R_10_14470001 chr2R_14470001 RAL-373_125b 1148 chr2R 14497363 14497408 chr2R 14498590 14498634 1360 11 1223 3.0 8.0 5.5 1.7 1271 chr2R 14497363 3` UTR Cpsf160 - chr2R 14497998 intron Cpsf160 - chr2R 14498634 3` UTR Cpsf160 - chr2R_11_14495001 chr2R_14495001 RAL-373_125b 1149 chr2R 14514435 14514500 chr2R 14514580 14514642 10 145 5.0 3.0 4.0 2.0 207 chr2R 14514435 intron,exon Cpr51A -,CG30197 + chr2R 14514538 intron,intron Cpr51A -,CG30197 + chr2R 14514642 intron,intron Cpr51A -,CG30197 + chr2R_10_14510001 chr2R_14510001 RAL-373_125b 1150 chr2R 14530326 14530376 chr2R 14530465 14530514 9 135 5.0 6.0 5.5 1.4 188 chr2R 14530326 intron ttv + chr2R 14530420 intron ttv + chr2R 14530514 intron ttv + chr2R_9_14530001 chr2R_14530001 RAL-373_125b 1151 chr2R 14533728 14533760 chr2R 14533860 14533893 7 129 6.5 4.0 5.2 1.1 165 chr2R 14533728 intron ttv + chr2R 14533810 intron ttv + chr2R 14533893 intron ttv + chr2R_7_14530001 chr2R_14530001 RAL-373_125b 1152 chr2R 14533777 14533786 chr2R 14533910 14533919 4 133 4.5 12.5 8.5 0.4 142 chr2R 14533777 intron ttv + chr2R 14533848 intron ttv + chr2R 14533919 intron ttv + chr2R_4_14530001 chr2R_14530001 RAL-373_125b 1153 chr2R 14538920 14538981 chr2R 14539034 14539051 11 99 9.0 6.0 7.5 1.3 131 chr2R 14538920 intron ttv + chr2R 14538986 intron ttv + chr2R 14539051 intron ttv + chr2R_11_14535001 chr2R_14535001 RAL-373_125b 1154 chr2R 14556116 14556195 chr2R 14556245 14556309 26 125 4.5 6.0 5.2 4.2 193 chr2R 14556116 intron ttv + chr2R 14556212 intron ttv + chr2R 14556309 intron ttv + chr2R_26_14555001 chr2R_14555001 RAL-373_125b 1155 chr2R 14566408 14566470 chr2R 14566545 14566607 17 133 6.5 5.5 6.0 2.4 199 chr2R 14566408 intron ttv + chr2R 14566508 intron ttv + chr2R 14566607 intron ttv + chr2R_17_14565001 chr2R_14565001 RAL-373_125b 1156 chr2R 14634234 14634310 chr2R 14634372 14634448 17 135 8.0 6.5 7.2 2.1 214 chr2R 14634234 intergenic not near genes chr2R 14634341 intergenic not near genes chr2R 14634448 intergenic not near genes chr2R_17_14630001 chr2R_14630001 RAL-373_125b 1157 chr2R 14715652 14715717 chr2R 14715774 14715817 14 124 3.0 5.5 4.2 2.7 165 chr2R 14715652 intergenic not near genes chr2R 14715734 intergenic not near genes chr2R 14715817 intergenic not near genes chr2R_14_14715001 chr2R_14715001 RAL-373_125b 1158 chr2R 14737595 14737639 chr2R 14737714 14737767 11 126 5.5 6.5 6.0 1.6 172 chr2R 14737595 3` UTR CR43428 - chr2R 14737681 3` UTR CR43428 - chr2R 14737767 3` UTR CR43428 - chr2R_11_14735001 chr2R_14735001 RAL-373_125b 1159 chr2R 14785980 14786054 chr2R 14786122 14786197 10 143 0.0 4.0 2.0 3.3 217 chr2R 14785980 intron kn - chr2R 14786088 intron kn - chr2R 14786197 intron kn - chr2R_10_14785001 chr2R_14785001 RAL-373_125b 1160 chr2R 14799866 14799892 chr2R 14799992 14800018 4 123 5.0 18.5 11.8 0.3 152 chr2R 14799866 intron kn - chr2R 14799942 intron kn - chr2R 14800018 intron kn - chr2R_4_14795001 chr2R_14795001 RAL-373_125b 1161 chr2R 14803441 14803504 chr2R 14803566 14803634 7 128 0.5 8.5 4.5 1.3 193 chr2R 14803441 intron kn - chr2R 14803538 intron kn - chr2R 14803634 intron kn - chr2R_7_14800001 chr2R_14800001 RAL-373_125b 1162 chr2R 14826350 14826366 chr2R 14826504 14826519 6 153 7.0 0.0 3.5 1.3 169 chr2R 14826350 intergenic not near genes chr2R 14826434 intergenic not near genes chr2R 14826519 intergenic not near genes chr2R_6_14825001 chr2R_14825001 RAL-373_125b 1163 chr2R 14889170 14889242 chr2R 14897828 14897891 Max-element 11 8653 5.5 0.0 2.8 2.9 8721 chr2R 14889170 intergenic Cyp6a8 - chr2R 14893530 intergenic not near genes chr2R 14897891 intergenic not near genes chr2R_11_14890001 chr2R_14890001 RAL-373_125b 1164 chr2R 14911667 14911710 chr2R 14911825 14911878 17 171 9.0 4.5 6.8 2.2 211 chr2R 14911667 intron CG10249 - chr2R 14911772 intron CG10249 - chr2R 14911878 intron CG10249 - chr2R_17_14910001 chr2R_14910001 RAL-373_125b 1165 chr2R 14917192 14917258 chr2R 14917333 14917391 15 137 5.5 1.5 3.5 3.3 199 chr2R 14917192 intron CG10249 - chr2R 14917292 intron CG10249 - chr2R 14917391 intron CG10249 - chr2R_15_14915001 chr2R_14915001 RAL-373_125b 1166 chr2R 14919105 14919140 chr2R 14919264 14919299 8 157 6.5 0.0 3.2 1.9 194 chr2R 14919105 intron CG10249 - chr2R 14919202 intron CG10249 - chr2R 14919299 intron CG10249 - chr2R_8_14915001 chr2R_14915001 RAL-373_125b 1167 chr2R 14987353 14987414 chr2R 14987533 14987553 18 186 6.0 6.5 6.2 2.5 200 chr2R 14987353 intron pcs + chr2R 14987453 intron pcs + chr2R 14987553 intron pcs + chr2R_18_14985001 chr2R_14985001 RAL-373_125b 1168 chr2R 14998477 14998504 chr2R 14998667 14998689 12 190 2.5 5.5 4.0 2.4 212 chr2R 14998477 intergenic not near genes chr2R 14998583 intergenic not near genes chr2R 14998689 intergenic not near genes chr2R_12_14995001 chr2R_14995001 RAL-373_125b 1169 chr2R 15004673 15004740 chr2R 15005058 15005109 jockey 20 380 4.5 2.5 3.5 4.4 436 chr2R 15004673 intergenic not near genes chr2R 15004891 intergenic not near genes chr2R 15005109 intergenic not near genes chr2R_20_15000001 chr2R_15000001 RAL-373_125b 1170 chr2R 15015413 15015477 chr2R 15022881 15022951 mdg1 13 7471 4.5 4.0 4.2 2.5 7538 chr2R 15015413 intron hbs + chr2R 15019182 intron hbs + chr2R 15022951 intron hbs + chr2R_13_15015001 chr2R_15015001 RAL-373_125b 1171 chr2R 15051037 15051110 chr2R 15051169 15051242 22 130 2.0 5.5 3.8 4.6 205 chr2R 15051037 intergenic not near genes chr2R 15051140 intergenic not near genes chr2R 15051242 intergenic not near genes chr2R_22_15050001 chr2R_15050001 RAL-373_125b 1172 chr2R 15084961 15084986 chr2R 15092050 15092077 297 5 7095 6.5 8.5 7.5 0.6 7116 chr2R 15084961 intergenic not near genes chr2R 15088519 intergenic not near genes chr2R 15092077 5` UTR CR44457 + chr2R_5_15085001 chr2R_15085001 RAL-373_125b 1173 chr2R 15119273 15119337 chr2R 15127804 15127837 Tirant 16 8519 8.0 2.5 5.2 2.6 8564 chr2R 15119273 intron chn + chr2R 15123555 intron chn + chr2R 15127837 intron chn + chr2R_16_15120001 chr2R_15120001 RAL-373_125b 1174 chr2R 15137920 15137983 chr2R 15138049 15138091 11 126 3.0 2.5 2.8 2.9 171 chr2R 15137920 intron chn + chr2R 15138006 intron chn + chr2R 15138091 intron chn + chr2R_11_15135001 chr2R_15135001 RAL-373_125b 1175 chr2R 15157066 15157106 chr2R 15157196 15157246 6 138 0.0 6.5 3.2 1.4 180 chr2R 15157066 intron igl + chr2R 15157156 intron igl + chr2R 15157246 intron igl + chr2R_6_15155001 chr2R_15155001 RAL-373_125b 1176 chr2R 15201181 15201246 chr2R 15201322 15201387 8 139 4.0 0.5 2.2 2.5 206 chr2R 15201181 5` UTR GPHR - chr2R 15201284 5` UTR CG11807 + chr2R 15201387 intron CG11807 + chr2R_8_15200001 chr2R_15200001 RAL-373_125b 1177 chr2R 15230144 15230165 chr2R 15230273 15230313 6 141 5.0 6.5 5.8 0.9 169 chr2R 15230144 intron,5` UTR Fs -,CR44370 + chr2R 15230228 intron,5` UTR Fs -,CR44370 + chr2R 15230313 intron,5` UTR Fs -,CR44370 + chr2R_6_15230001 chr2R_15230001 RAL-373_125b 1178 chr2R 15235052 15235093 chr2R 15235230 15235270 4 178 1.5 7.5 4.5 0.7 218 chr2R 15235052 intron Fs - chr2R 15235161 intron Fs - chr2R 15235270 intron Fs - chr2R_4_15235001 chr2R_15235001 RAL-373_125b 1179 chr2R 15252081 15252144 chr2R 15252208 15252266 20 125 6.0 6.0 6.0 2.9 185 chr2R 15252081 intron scb + chr2R 15252174 intron scb + chr2R 15252266 intron scb + chr2R_20_15250001 chr2R_15250001 RAL-373_125b 1180 chr2R 15296126 15296173 chr2R 15296259 15296306 20 127 5.5 9.0 7.2 2.4 180 chr2R 15296126 intron Trpm - chr2R 15296216 intron Trpm - chr2R 15296306 intron Trpm - chr2R_20_15295001 chr2R_15295001 RAL-373_125b 1181 chr2R 15314232 15314299 chr2R 15314408 15314465 19 175 3.0 8.0 5.5 2.9 233 chr2R 15314232 intron mus210 + chr2R 15314348 intron mus210 + chr2R 15314465 intron mus210 + chr2R_19_15310001 chr2R_15310001 RAL-373_125b 1182 chr2R 15374792 15375052 chr2R 15374900 15375186 5 144 3.5 2.0 2.8 1.3 394 chr2R 15374792 intergenic not near genes chr2R 15374989 intergenic not near genes chr2R 15375186 intergenic not near genes chr2R_5_15370001 chr2R_15370001 RAL-373_125b 1183 chr2R 15395818 15395879 chr2R 15395963 15396034 17 151 7.5 7.5 7.5 2.0 216 chr2R 15395818 intergenic not near genes chr2R 15395926 intergenic not near genes chr2R 15396034 intergenic not near genes chr2R_17_15395001 chr2R_15395001 RAL-373_125b 1184 chr2R 15558742 15558753 chr2R 15559022 15559033 4 280 4.0 4.5 4.2 0.8 291 chr2R 15558742 intron CG12963 + chr2R 15558888 intron CG12963 + chr2R 15559033 intron CG12963 + chr2R_4_15555001 chr2R_15555001 RAL-373_125b 1185 chr2R 15645664 15645702 chr2R 15645783 15645843 7 127 0.5 0.0 0.2 5.8 179 chr2R 15645664 intron CG42524 + chr2R 15645754 intron CG42524 + chr2R 15645843 intron CG42524 + chr2R_7_15645001 chr2R_15645001 RAL-373_125b 1186 chr2R 15679060 15679128 chr2R 15679190 15679262 19 132 5.0 4.5 4.8 3.3 202 chr2R 15679060 intergenic CG8207 -,Vha14-1 - chr2R 15679161 intergenic CG8207 -,Vha14-1 - chr2R 15679262 intergenic Vha14-1 -,CG8207 - chr2R_19_15675001 chr2R_15675001 RAL-373_125b 1187 chr2R 15709099 15709141 chr2R 15709315 15709330 14 200 10.0 2.5 6.2 1.9 231 chr2R 15709099 intergenic not near genes chr2R 15709214 intergenic not near genes chr2R 15709330 intergenic not near genes chr2R_14_15705001 chr2R_15705001 RAL-373_125b 1188 chr2R 15725373 15725412 chr2R 15725482 15725538 9 108 10.0 5.0 7.5 1.1 165 chr2R 15725373 intergenic not near genes chr2R 15725456 intergenic not near genes chr2R 15725538 intergenic not near genes chr2R_9_15725001 chr2R_15725001 RAL-373_125b 1189 chr2R 15828112 15828154 chr2R 15828322 15828364 5 210 1.0 4.5 2.8 1.3 252 chr2R 15828112 intron,intron tun +,Poxn - chr2R 15828238 intron,intron tun +,Poxn - chr2R 15828364 intron,intron tun +,Poxn - chr2R_5_15825001 chr2R_15825001 RAL-373_125b 1190 chr2R 15833488 15833545 chr2R 15833613 15833677 12 128 5.0 5.5 5.2 1.9 189 chr2R 15833488 intron,intron tun +,Poxn - chr2R 15833582 intron,intron tun +,Poxn - chr2R 15833677 intron,intron tun +,Poxn - chr2R_12_15830001 chr2R_15830001 RAL-373_125b 1191 chr2R 15891767 15891836 chr2R 15891893 15891962 22 125 5.0 3.0 4.0 4.4 195 chr2R 15891767 intron sli - chr2R 15891864 intron sli - chr2R 15891962 intron sli - chr2R_22_15890001 chr2R_15890001 RAL-373_125b 1192 chr2R 15898852 15898907 chr2R 15898995 15899055 22 145 6.0 6.0 6.0 3.1 203 chr2R 15898852 intron sli - chr2R 15898954 intron sli - chr2R 15899055 intron sli - chr2R_22_15895001 chr2R_15895001 RAL-373_125b 1193 chr2R 16037182 16037225 chr2R 16037309 16037352 11 122 15.0 11.0 13.0 0.8 170 chr2R 16037182 intron SP2353 + chr2R 16037267 intron SP2353 + chr2R 16037352 intron SP2353 + chr2R_11_16035001 chr2R_16035001 RAL-373_125b 1194 chr2R 16142089 16142140 chr2R 16142821 16142872 4 731 17.5 22.0 19.8 0.2 783 chr2R 16142089 intergenic CG30094 +,Got1 + chr2R 16142480 exon CG30094 + chr2R 16142872 3` UTR CG30094 + chr2R_4_16140001 chr2R_16140001 RAL-373_125b 1195 chr2R 16227091 16227160 chr2R 16227221 16227285 10 125 10.0 5.0 7.5 1.2 194 chr2R 16227091 intron,intron CG15706 -,Tsf3 + chr2R 16227188 intron,intron CG15706 -,Tsf3 + chr2R 16227285 intron,intron CG15706 -,Tsf3 + chr2R_10_16225001 chr2R_16225001 RAL-373_125b 1196 chr2R 16245589 16245644 chr2R 16245727 16245766 16 133 4.5 5.5 5.0 2.7 177 chr2R 16245589 intron CngA - chr2R 16245678 intron CngA - chr2R 16245766 intron CngA - chr2R_16_16245001 chr2R_16245001 RAL-373_125b 1197 chr2R 16352796 16352872 chr2R 16352926 16353005 11 131 5.5 2.5 4.0 2.2 209 chr2R 16352796 intergenic not near genes chr2R 16352900 intergenic not near genes chr2R 16353005 intergenic not near genes chr2R_11_16350001 chr2R_16350001 RAL-373_125b 1198 chr2R 16387466 16387543 chr2R 16387997 16388039 11 519 4.5 1.0 2.8 2.9 573 chr2R 16387466 intron Sema-2b + chr2R 16387752 intron Sema-2b + chr2R 16388039 intron Sema-2b + chr2R_11_16385001 chr2R_16385001 RAL-373_125b 1199 chr2R 16460446 16460477 chr2R 16460574 16460605 6 127 3.5 6.0 4.8 1.0 159 chr2R 16460446 intergenic not near genes chr2R 16460526 intergenic not near genes chr2R 16460605 intergenic not near genes chr2R_6_16460001 chr2R_16460001 RAL-373_125b 1200 chr2R 16465645 16465697 chr2R 16465765 16465827 11 117 7.0 3.5 5.2 1.8 182 chr2R 16465645 intergenic not near genes chr2R 16465736 intergenic not near genes chr2R 16465827 intergenic not near genes chr2R_11_16465001 chr2R_16465001 RAL-373_125b 1201 chr2R 16489248 16489296 chr2R 16489375 16489425 10 131 5.5 14.5 10.0 0.9 177 chr2R 16489248 intergenic CG33459 + chr2R 16489336 intergenic CG33459 + chr2R 16489425 intergenic CG33459 + chr2R_10_16485001 chr2R_16485001 RAL-373_125b 1202 chr2R 16502611 16502683 chr2R 16502753 16502833 8 144 5.0 1.0 3.0 2.0 222 chr2R 16502611 intron Sema-2a + chr2R 16502722 intron Sema-2a + chr2R 16502833 intron Sema-2a + chr2R_8_16500001 chr2R_16500001 RAL-373_125b 1203 chr2R 16503843 16503900 chr2R 16503969 16504040 11 135 4.5 5.5 5.0 1.8 197 chr2R 16503843 intron Sema-2a + chr2R 16503942 intron Sema-2a + chr2R 16504040 intron Sema-2a + chr2R_11_16500001 chr2R_16500001 RAL-373_125b 1204 chr2R 16518006 16518068 chr2R 16518131 16518194 23 125 6.5 5.0 5.8 3.4 188 chr2R 16518006 intron Sema-2a + chr2R 16518100 intron Sema-2a + chr2R 16518194 intron Sema-2a + chr2R_23_16515001 chr2R_16515001 RAL-373_125b 1205 chr2R 16537859 16538087 chr2R 16537989 16538225 14 139 3.5 3.0 3.2 3.3 366 chr2R 16537859 intergenic not near genes chr2R 16538042 intergenic not near genes chr2R 16538225 intergenic not near genes chr2R_14_16535001 chr2R_16535001 RAL-373_125b 1206 chr2R 16539613 16539670 chr2R 16544867 16544899 copia 12 5255 5.0 6.0 5.5 1.8 5286 chr2R 16539613 intergenic not near genes chr2R 16542256 intergenic not near genes chr2R 16544899 intergenic not near genes chr2R_12_16540001 chr2R_16540001 RAL-373_125b 1207 chr2R 16552341 16552396 chr2R 16552469 16552491 16 124 7.5 6.5 7.0 2.0 150 chr2R 16552341 5` UTR Syn2 + chr2R 16552416 5` UTR Syn2 + chr2R 16552491 5` UTR Syn2 + chr2R_16_16550001 chr2R_16550001 RAL-373_125b 1208 chr2R 16571835 16571896 chr2R 16571969 16572041 12 142 2.0 5.5 3.8 2.5 206 chr2R 16571835 intergenic CG4927 + chr2R 16571938 intergenic CG4927 + chr2R 16572041 intergenic CG4927 + chr2R_12_16570001 chr2R_16570001 RAL-373_125b 1209 chr2R 16614092 16614155 chr2R 16614358 16614424 16 269 4.5 8.0 6.2 2.2 332 chr2R 16614092 intron CG5065 + chr2R 16614258 intron CG5065 + chr2R 16614424 intron CG5065 + chr2R_16_16610001 chr2R_16610001 RAL-373_125b 1210 chr2R 16617065 16617088 chr2R 16617178 16617198 5 122 7.0 8.0 7.5 0.6 133 chr2R 16617065 intron CG5065 + chr2R 16617132 intron CG5065 + chr2R 16617198 intron CG5065 + chr2R_5_16615001 chr2R_16615001 RAL-373_125b 1211 chr2R 16701949 16702023 chr2R 16702086 16702110 20 130 3.0 3.5 3.2 4.8 161 chr2R 16701949 intron CG30463 - chr2R 16702030 intron CG30463 - chr2R 16702110 intron CG30463 - chr2R_20_16700001 chr2R_16700001 RAL-373_125b 1212 chr2R 16723989 16724044 chr2R 16724153 16724209 4 163 3.0 7.5 5.2 0.6 220 chr2R 16723989 intron CG30463 - chr2R 16724099 intron CG30463 - chr2R 16724209 intron CG30463 - chr2R_4_16720001 chr2R_16720001 RAL-373_125b 1213 chr2R 16732821 16732881 chr2R 16733041 16733101 19 219 4.0 4.5 4.2 3.7 280 chr2R 16732821 5` UTR CG30463 - chr2R 16732961 intergenic CG30463 - chr2R 16733101 intergenic CG30463 - chr2R_19_16730001 chr2R_16730001 RAL-373_125b 1214 chr2R 16737107 16737159 chr2R 16737235 16737304 19 142 3.5 4.0 3.8 4.0 197 chr2R 16737107 3` UTR CG43104 - chr2R 16737206 3` UTR CG43104 - chr2R 16737304 exon CG43104 - chr2R_19_16735001 chr2R_16735001 RAL-373_125b 1215 chr2R 16775620 16775666 chr2R 16775922 16775968 17 314 6.0 3.0 4.5 3.1 348 chr2R 16775620 3` UTR Arp53D + chr2R 16775794 intergenic Arp53D + chr2R 16775968 intergenic Arp53D + chr2R_17_16775001 chr2R_16775001 RAL-373_125b 1216 chr2R 16787424 16787498 chr2R 16787556 16787630 15 131 3.5 4.5 4.0 3.0 206 chr2R 16787424 intron CG5522 + chr2R 16787527 intron CG5522 + chr2R 16787630 intron CG5522 + chr2R_15_16785001 chr2R_16785001 RAL-373_125b 1217 chr2R 16807998 16808052 chr2R 16808141 16808178 7 146 5.0 6.0 5.5 1.1 180 chr2R 16807998 intergenic not near genes chr2R 16808088 intergenic not near genes chr2R 16808178 intergenic not near genes chr2R_7_16805001 chr2R_16805001 RAL-373_125b 1218 chr2R 16813821 16813894 chr2R 16813999 16814048 23 169 7.0 8.0 7.5 2.7 227 chr2R 16813821 intergenic not near genes chr2R 16813934 intergenic CR44380 - chr2R 16814048 intergenic CR44380 - chr2R_23_16810001 chr2R_16810001 RAL-373_125b 1219 chr2R 16833776 16833823 chr2R 16833917 16833930 24 135 8.0 3.0 5.5 3.7 154 chr2R 16833776 5` UTR CR43650 + chr2R 16833853 5` UTR CR43650 + chr2R 16833930 5` UTR CR43650 + chr2R_24_16830001 chr2R_16830001 RAL-373_125b 1220 chr2R 16892269 16892310 chr2R 16892411 16892452 7 139 3.0 4.0 3.5 1.6 183 chr2R 16892269 intron CG8910 - chr2R 16892360 intron CG8910 - chr2R 16892452 intron CG8910 - chr2R_7_16890001 chr2R_16890001 RAL-373_125b 1221 chr2R 16962204 16962252 chr2R 16962331 16962367 9 122 9.0 9.0 9.0 0.9 163 chr2R 16962204 intergenic not near genes chr2R 16962286 intergenic not near genes chr2R 16962367 intergenic not near genes chr2R_9_16960001 chr2R_16960001 RAL-373_125b 1222 chr2R 16981938 16982098 chr2R 16982098 16982221 11 179 0.0 0.0 0.0 11.0 283 chr2R 16981938 intron Cbp53E + chr2R 16982080 intron Cbp53E + chr2R 16982221 intron Cbp53E + chr2R_11_16980001 chr2R_16980001 RAL-373_125b 1223 chr2R 17080327 17080340 chr2R 17080490 17080503 4 163 5.0 5.0 5.0 0.7 176 chr2R 17080327 intron CG30460 - chr2R 17080415 intron CG30460 - chr2R 17080503 intron CG30460 - chr2R_4_17080001 chr2R_17080001 RAL-373_125b 1224 chr2R 17132812 17132866 chr2R 17132962 17133016 12 148 5.0 8.5 6.8 1.5 204 chr2R 17132812 intergenic not near genes chr2R 17132914 intergenic not near genes chr2R 17133016 intergenic Acp54A1 + chr2R_12_17130001 chr2R_17130001 RAL-373_125b 1225 chr2R 17147202 17147263 chr2R 17152283 17152339 jockey 17 5079 7.5 7.0 7.2 2.1 5137 chr2R 17147202 intergenic not near genes chr2R 17149770 intergenic not near genes chr2R 17152339 intergenic not near genes chr2R_17_17145001 chr2R_17145001 RAL-373_125b 1226 chr2R 17161309 17161346 chr2R 17161566 17161575 4 244 7.5 0.0 3.8 0.8 266 chr2R 17161309 intergenic CG30457 - chr2R 17161442 intergenic not near genes chr2R 17161575 intergenic not near genes chr2R_4_17160001 chr2R_17160001 RAL-373_125b 1227 chr2R 17161349 17161364 chr2R 17161561 17161617 4 235 6.0 0.0 3.0 1.0 268 chr2R 17161349 intergenic not near genes chr2R 17161483 intergenic not near genes chr2R 17161617 intergenic not near genes chr2R_4_17160001 chr2R_17160001 RAL-373_125b 1228 chr2R 17169316 17169365 chr2R 17169447 17169496 5 127 6.0 0.0 3.0 1.2 180 chr2R 17169316 intergenic not near genes chr2R 17169406 intergenic not near genes chr2R 17169496 intergenic not near genes chr2R_5_17165001 chr2R_17165001 RAL-373_125b 1229 chr2R 17226390 17226461 chr2R 17226783 17226850 11 384 6.0 6.5 6.2 1.5 460 chr2R 17226390 intron mbl + chr2R 17226620 intron mbl + chr2R 17226850 intron mbl + chr2R_11_17225001 chr2R_17225001 RAL-373_125b 1230 chr2R 17236479 17236523 chr2R 17241722 17241772 copia 15 5251 6.0 5.5 5.8 2.2 5293 chr2R 17236479 intron mbl + chr2R 17239126 intron mbl + chr2R 17241772 intron mbl + chr2R_15_17235001 chr2R_17235001 RAL-373_125b 1231 chr2R 17330379 17330426 chr2R 17330529 17330576 9 149 2.0 6.0 4.0 1.8 197 chr2R 17330379 intron mbl + chr2R 17330478 intron mbl + chr2R 17330576 intron mbl + chr2R_9_17330001 chr2R_17330001 RAL-373_125b 1232 chr2R 17331658 17331727 chr2R 17331784 17331853 12 120 1.5 4.5 3.0 3.0 195 chr2R 17331658 intron mbl + chr2R 17331756 intron mbl + chr2R 17331853 intron mbl + chr2R_12_17330001 chr2R_17330001 RAL-373_125b 1233 chr2R 17335358 17335396 chr2R 17335470 17335517 18 147 2.5 3.5 3.0 4.5 159 chr2R 17335358 intron mbl + chr2R 17335438 intron mbl + chr2R 17335517 intron mbl + chr2R_18_17335001 chr2R_17335001 RAL-373_125b 1234 chr2R 17351393 17351405 chr2R 17351516 17351538 5 131 5.5 4.0 4.8 0.9 145 chr2R 17351393 intron mbl + chr2R 17351466 intron mbl + chr2R 17351538 intron mbl + chr2R_5_17350001 chr2R_17350001 RAL-373_125b 1235 chr2R 17389224 17389295 chr2R 17389365 17389424 20 132 5.5 8.0 6.8 2.6 200 chr2R 17389224 intergenic CR44344 - chr2R 17389324 intergenic CR44344 - chr2R 17389424 intergenic CR44344 - chr2R_20_17385001 chr2R_17385001 RAL-373_125b 1236 chr2R 17397812 17397835 chr2R 17397946 17397978 7 140 4.5 9.5 7.0 0.9 166 chr2R 17397812 intron Sip1 + chr2R 17397895 intron Sip1 + chr2R 17397978 intron Sip1 + chr2R_7_17395001 chr2R_17395001 RAL-373_125b 1237 chr2R 17443724 17443779 chr2R 17443850 17443905 8 126 4.5 4.5 4.5 1.5 181 chr2R 17443724 intron EDTP - chr2R 17443814 intron EDTP - chr2R 17443905 intron EDTP - chr2R_8_17440001 chr2R_17440001 RAL-373_125b 1238 chr2R 17458966 17459029 chr2R 17459101 17459164 16 133 5.5 4.5 5.0 2.7 198 chr2R 17458966 intron CG14478 + chr2R 17459065 intron CG14478 + chr2R 17459164 intron CG14478 + chr2R_16_17455001 chr2R_17455001 RAL-373_125b 1239 chr2R 17485885 17485950 chr2R 17490694 17490768 F-element 10 4813 6.5 4.0 5.2 1.6 4883 chr2R 17485885 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488326 intron NT5E-2 + chr2R 17490768 intron NT5E-2 + chr2R_10_17485001 chr2R_17485001 RAL-373_125b 1240 chr2R 17650679 17650724 chr2R 17650877 17650927 10 200 11.0 6.0 8.5 1.1 248 chr2R 17650679 intron CCHa1-R - chr2R 17650803 intron CCHa1-R - chr2R 17650927 exon CCHa1-R - chr2R_10_17650001 chr2R_17650001 RAL-373_125b 1241 chr2R 17657279 17657357 chr2R 17657430 17657500 9 149 2.5 2.0 2.2 2.8 221 chr2R 17657279 intron CCHa1-R - chr2R 17657390 intron CCHa1-R - chr2R 17657500 intron CCHa1-R - chr2R_9_17655001 chr2R_17655001 RAL-373_125b 1242 chr2R 17660564 17660599 chr2R 17660678 17660721 7 113 6.0 2.0 4.0 1.4 157 chr2R 17660564 intron CCHa1-R - chr2R 17660642 intron CCHa1-R - chr2R 17660721 intron CCHa1-R - chr2R_7_17660001 chr2R_17660001 RAL-373_125b 1243 chr2R 17708347 17708408 chr2R 17708478 17708532 13 130 4.5 8.0 6.2 1.8 185 chr2R 17708347 intron CG6424 - chr2R 17708440 intron CG6424 - chr2R 17708532 intron CG6424 - chr2R_13_17705001 chr2R_17705001 RAL-373_125b 1244 chr2R 17709942 17709962 chr2R 17710083 17710103 9 138 3.5 0.0 1.8 3.2 161 chr2R 17709942 intron CG6424 - chr2R 17710022 intron CG6424 - chr2R 17710103 intron CG6424 - chr2R_9_17710001 chr2R_17710001 RAL-373_125b 1245 chr2R 17709963 17710104 chr2R 17710074 17710221 10 139 0.0 0.0 0.0 10.0 258 chr2R 17709963 intron CG6424 - chr2R 17710092 intron CG6424 - chr2R 17710221 intron CG6424 - chr2R_10_17710001 chr2R_17710001 RAL-373_125b 1246 chr2R 17724792 17724873 chr2R 17724926 17724951 11 121 3.0 6.5 4.8 1.9 159 chr2R 17724792 exon CG10933 + chr2R 17724872 3` UTR CG10933 + chr2R 17724951 3` UTR CG10933 + chr2R_11_17720001 chr2R_17720001 RAL-373_125b 1247 chr2R 17782330 17782383 chr2R 17783583 17783635 pogo 15 1252 3.5 7.0 5.2 2.4 1305 chr2R 17782330 intergenic CG33981 -,fab1 - chr2R 17782982 intergenic not near genes chr2R 17783635 intergenic mir-31a - chr2R_15_17780001 chr2R_17780001 RAL-373_125b 1248 chr2R 17783977 17784054 chr2R 17784268 17784298 pogo 19 284 4.5 8.0 6.2 2.6 321 chr2R 17783977 intergenic mir-31a - chr2R 17784138 intergenic mir-31a - chr2R 17784298 intergenic mir-31a - chr2R_19_17780001 chr2R_17780001 RAL-373_125b 1249 chr2R 17794735 17794762 chr2R 17794864 17794891 9 128 5.5 2.0 3.8 1.9 156 chr2R 17794735 intron Dhit + chr2R 17794813 intron Dhit + chr2R 17794891 intron Dhit + chr2R_9_17790001 chr2R_17790001 RAL-373_125b 1250 chr2R 17924981 17925051 chr2R 17925108 17925170 13 116 3.5 7.0 5.2 2.1 189 chr2R 17924981 exon Elk + chr2R 17925076 exon Elk + chr2R 17925170 exon Elk + chr2R_13_17925001 chr2R_17925001 RAL-373_125b 1251 chr2R 17966117 17966148 chr2R 17966246 17966274 8 128 9.5 8.5 9.0 0.8 157 chr2R 17966117 intergenic not near genes chr2R 17966196 intergenic not near genes chr2R 17966274 intergenic not near genes chr2R_8_17965001 chr2R_17965001 RAL-373_125b 1252 chr2R 17997017 17997085 chr2R 17997175 17997233 7 155 24.5 11.0 17.8 0.4 216 chr2R 17997017 intron dpr13 - chr2R 17997125 intron dpr13 - chr2R 17997233 intron dpr13 - chr2R_7_17995001 chr2R_17995001 RAL-373_125b 1253 chr2R 18009738 18009795 chr2R 18009894 18009951 11 153 2.5 6.5 4.5 2.0 213 chr2R 18009738 intergenic not near genes chr2R 18009844 intergenic not near genes chr2R 18009951 intergenic not near genes chr2R_11_18005001 chr2R_18005001 RAL-373_125b 1254 chr2R 18023124 18023191 chr2R 18023254 18023327 17 134 7.5 8.5 8.0 1.9 203 chr2R 18023124 intergenic not near genes chr2R 18023226 intergenic not near genes chr2R 18023327 intergenic not near genes chr2R_17_18020001 chr2R_18020001 RAL-373_125b 1255 chr2R 18035368 18035374 chr2R 18035489 18035495 6 122 18.0 7.5 12.8 0.4 127 chr2R 18035368 intergenic not near genes chr2R 18035432 intergenic not near genes chr2R 18035495 intergenic not near genes chr2R_6_18035001 chr2R_18035001 RAL-373_125b 1256 chr2R 18035376 18035431 chr2R 18035487 18035555 17 119 6.0 7.5 6.8 2.2 179 chr2R 18035376 intergenic not near genes chr2R 18035466 intergenic not near genes chr2R 18035555 intergenic not near genes chr2R_17_18035001 chr2R_18035001 RAL-373_125b 1257 chr2R 18042985 18042992 chr2R 18043127 18043132 4 142 0.0 9.0 4.5 0.7 147 chr2R 18042985 3` UTR CG5773 - chr2R 18043058 3` UTR CG5773 - chr2R 18043132 exon CG5773 - chr2R_4_18040001 chr2R_18040001 RAL-373_125b 1258 chr2R 18045266 18045289 chr2R 18045404 18045427 8 138 8.0 4.5 6.2 1.1 161 chr2R 18045266 intergenic CG5770 - chr2R 18045346 intergenic CG5770 - chr2R 18045427 intergenic CG5770 - chr2R_8_18045001 chr2R_18045001 RAL-373_125b 1259 chr2R 18045638 18045677 chr2R 18046040 18046079 jockey 16 401 6.5 5.0 5.8 2.4 441 chr2R 18045638 intergenic not near genes chr2R 18045858 intergenic not near genes chr2R 18046079 intergenic CG5767 - chr2R_16_18045001 chr2R_18045001 RAL-373_125b 1260 chr2R 18054561 18054606 chr2R 18054683 18054738 11 128 3.5 5.0 4.2 2.1 177 chr2R 18054561 intergenic CR45313 +,CG10911 - chr2R 18054650 intergenic CR45313 + chr2R 18054738 intergenic CR45313 + chr2R_11_18050001 chr2R_18050001 RAL-373_125b 1261 chr2R 18074554 18074611 chr2R 18074680 18074736 9 124 7.5 3.0 5.2 1.5 182 chr2R 18074554 intron CG34386 + chr2R 18074645 intron CG34386 + chr2R 18074736 intron CG34386 + chr2R_9_18070001 chr2R_18070001 RAL-373_125b 1262 chr2R 18179986 18180054 chr2R 18180107 18180160 23 117 11.5 9.5 10.5 2.0 174 chr2R 18179986 5` UTR CG5726 - chr2R 18180073 5` UTR CG5726 - chr2R 18180160 5` UTR CG5726 - chr2R_23_18180001 chr2R_18180001 RAL-373_125b 1263 chr2R 18318333 18318341 chr2R 18318464 18318472 4 130 5.5 0.0 2.8 1.1 139 chr2R 18318333 intron sbb - chr2R 18318402 intron sbb - chr2R 18318472 intron sbb - chr2R_4_18315001 chr2R_18315001 RAL-373_125b 1264 chr2R 18358357 18358374 chr2R 18372619 18372631 roo 4 14261 12.5 0.0 6.2 0.6 14274 chr2R 18358357 intergenic not near genes chr2R 18365494 intergenic not near genes chr2R 18372631 intergenic not near genes chr2R_4_18365001 chr2R_18365001 RAL-373_125b 1265 chr2R 18401656 18401733 chr2R 18402410 18402488 8 756 47.0 40.0 43.5 0.2 832 chr2R 18401656 intergenic GstE3 + chr2R 18402072 intergenic not near genes chr2R 18402488 intergenic not near genes chr2R_8_18400001 chr2R_18400001 RAL-373_125b 1266 chr2R 18405757 18405779 chr2R 18405877 18405909 10 128 2.0 8.0 5.0 1.7 152 chr2R 18405757 intergenic GstE6 +,GstE5 + chr2R 18405833 intergenic GstE6 +,GstE5 + chr2R 18405909 intergenic GstE6 + chr2R_10_18405001 chr2R_18405001 RAL-373_125b 1267 chr2R 18435699 18435764 chr2R 18435824 18435889 18 131 3.5 4.5 4.0 3.6 190 chr2R 18435699 intron CG30118 - chr2R 18435794 intron CG30118 - chr2R 18435889 intron CG30118 - chr2R_18_18435001 chr2R_18435001 RAL-373_125b 1268 chr2R 18439597 18439631 chr2R 18439711 18439764 14 139 2.5 6.0 4.2 2.7 167 chr2R 18439597 intron CG30118 - chr2R 18439680 intron CG30118 - chr2R 18439764 exon CG30118 - chr2R_14_18435001 chr2R_18435001 RAL-373_125b 1269 chr2R 18482990 18483052 chr2R 18483274 18483341 14 281 7.0 5.0 6.0 2.0 351 chr2R 18482990 intron CG30116 - chr2R 18483166 intron CG30116 - chr2R 18483341 intron CG30116 - chr2R_14_18480001 chr2R_18480001 RAL-373_125b 1270 chr2R 18487790 18487823 chr2R 18495290 18495319 blood 9 7500 3.5 5.0 4.2 1.7 7529 chr2R 18487790 intron CG30116 - chr2R 18491554 intron CG30116 - chr2R 18495319 intron CG30116 - chr2R_9_18490001 chr2R_18490001 RAL-373_125b 1271 chr2R 18526865 18526940 chr2R 18527006 18527081 7 141 3.5 4.5 4.0 1.4 216 chr2R 18526865 intergenic CG43066 + chr2R 18526973 intergenic CG10924 + chr2R 18527081 intergenic CG10924 + chr2R_7_18525001 chr2R_18525001 RAL-373_125b 1272 chr2R 18575753 18575813 chr2R 18581990 18582051 3S18 12 6215 6.0 5.5 5.8 1.8 6298 chr2R 18575753 intron GEFmeso - chr2R 18578902 intron GEFmeso - chr2R 18582051 intron GEFmeso - chr2R_12_18575001 chr2R_18575001 RAL-373_125b 1273 chr2R 18590831 18590861 chr2R 18600033 18600063 roo 8 9198 5.5 5.0 5.2 1.3 9232 chr2R 18590831 intron GEFmeso - chr2R 18595447 intron GEFmeso - chr2R 18600063 intron GEFmeso - chr2R_8_18595001 chr2R_18595001 RAL-373_125b 1274 chr2R 18590865 18590894 chr2R 18600028 18600076 roo 11 9191 3.5 5.0 4.2 2.1 9211 chr2R 18590865 intron GEFmeso - chr2R 18595470 intron GEFmeso - chr2R 18600076 intron GEFmeso - chr2R_11_18595001 chr2R_18595001 RAL-373_125b 1275 chr2R 18692852 18692918 chr2R 18692989 18693054 7 130 7.5 1.5 4.5 1.3 202 chr2R 18692852 exon Sik3 + chr2R 18692953 intron Sik3 + chr2R 18693054 intron Sik3 + chr2R_7_18690001 chr2R_18690001 RAL-373_125b 1276 chr2R 18732320 18732374 chr2R 18732483 18732548 19 174 1.5 7.0 4.2 3.7 228 chr2R 18732320 intron Hs3st-A + chr2R 18732434 intron Hs3st-A + chr2R 18732548 intron Hs3st-A + chr2R_19_18730001 chr2R_18730001 RAL-373_125b 1277 chr2R 18742199 18742273 chr2R 18742356 18742430 20 155 3.0 3.0 3.0 5.0 231 chr2R 18742199 intron Hs3st-A + chr2R 18742314 intron Hs3st-A + chr2R 18742430 intron Hs3st-A + chr2R_20_18740001 chr2R_18740001 RAL-373_125b 1278 chr2R 18785877 18785941 chr2R 18786006 18786070 21 126 10.0 7.0 8.5 2.2 193 chr2R 18785877 intron CG15080 + chr2R 18785974 intron CG15080 + chr2R 18786070 intron CG15080 + chr2R_21_18785001 chr2R_18785001 RAL-373_125b 1279 chr2R 18808019 18808028 chr2R 18808158 18808167 5 139 0.0 0.0 0.0 5.0 148 chr2R 18808019 intergenic CG15096 - chr2R 18808093 intergenic CG15096 - chr2R 18808167 intergenic CG15096 - chr2R_5_18805001 chr2R_18805001 RAL-373_125b 1280 chr2R 18827694 18827724 chr2R 18827824 18827854 8 130 2.5 7.5 5.0 1.3 160 chr2R 18827694 intron CG15097 - chr2R 18827774 intron CG15097 - chr2R 18827854 intron CG15097 - chr2R_8_18825001 chr2R_18825001 RAL-373_125b 1281 chr2R 18862309 18862399 chr2R 18862472 18862520 7 156 0.0 0.0 0.0 7.0 211 chr2R 18862309 intergenic Jheh3 - chr2R 18862414 intergenic Jheh3 -,CG43069 + chr2R 18862520 intergenic CG43069 +,Jheh3 - chr2R_7_18860001 chr2R_18860001 RAL-373_125b 1282 chr2R 18871604 18871675 chr2R 18871739 18871799 18 129 7.0 4.0 5.5 2.8 195 chr2R 18871604 intergenic not near genes chr2R 18871702 intergenic not near genes chr2R 18871799 intergenic not near genes chr2R_18_18870001 chr2R_18870001 RAL-373_125b 1283 chr2R 18889595 18889600 chr2R 18889736 18889747 4 146 10.0 5.5 7.8 0.5 152 chr2R 18889595 intron sano + chr2R 18889671 intron sano + chr2R 18889747 intron sano + chr2R_4_18885001 chr2R_18885001 RAL-373_125b 1284 chr2R 18889603 18889664 chr2R 18889735 18889754 7 133 5.5 5.5 5.5 1.1 151 chr2R 18889603 intron sano + chr2R 18889678 intron sano + chr2R 18889754 intron sano + chr2R_7_18885001 chr2R_18885001 RAL-373_125b 1285 chr2R 18900677 18900712 chr2R 18901025 18901067 13 352 8.5 5.5 7.0 1.6 390 chr2R 18900677 intron sano + chr2R 18900872 intron sano + chr2R 18901067 intron sano + chr2R_13_18900001 chr2R_18900001 RAL-373_125b 1286 chr2R 18900718 18900725 chr2R 18901023 18901081 4 337 6.5 5.5 6.0 0.6 363 chr2R 18900718 intron sano + chr2R 18900900 intron sano + chr2R 18901081 intron sano + chr2R_4_18900001 chr2R_18900001 RAL-373_125b 1287 chr2R 18926466 18926515 chr2R 18926592 18926651 16 134 7.5 0.5 4.0 3.2 185 chr2R 18926466 intron sano + chr2R 18926558 intron sano + chr2R 18926651 intron sano + chr2R_16_18925001 chr2R_18925001 RAL-373_125b 1288 chr2R 18964879 18964927 chr2R 18965005 18965053 15 120 7.0 4.0 5.5 2.3 174 chr2R 18964879 intergenic not near genes chr2R 18964966 intergenic not near genes chr2R 18965053 intergenic not near genes chr2R_15_18960001 chr2R_18960001 RAL-373_125b 1289 chr2R 19012920 19012964 chr2R 19013052 19013108 19 137 0.5 6.5 3.5 4.2 188 chr2R 19012920 intergenic not near genes chr2R 19013014 intergenic not near genes chr2R 19013108 intergenic not near genes chr2R_19_19010001 chr2R_19010001 RAL-373_125b 1290 chr2R 19018964 19019039 chr2R 19019172 19019214 10 198 10.5 8.0 9.2 1.0 250 chr2R 19018964 intergenic not near genes chr2R 19019089 intergenic not near genes chr2R 19019214 intergenic not near genes chr2R_10_19015001 chr2R_19015001 RAL-373_125b 1291 chr2R 19026002 19026053 chr2R 19026153 19026204 9 150 8.5 1.5 5.0 1.5 202 chr2R 19026002 exon 5-HT1B - chr2R 19026103 intron 5-HT1B - chr2R 19026204 intron 5-HT1B - chr2R_9_19025001 chr2R_19025001 RAL-373_125b 1292 chr2R 19048291 19048333 chr2R 19048418 19048480 9 144 0.0 6.5 3.2 2.1 189 chr2R 19048291 intergenic not near genes chr2R 19048386 intergenic not near genes chr2R 19048480 intergenic not near genes chr2R_9_19045001 chr2R_19045001 RAL-373_125b 1293 chr2R 19168689 19168767 chr2R 19168820 19168900 17 131 4.5 4.0 4.2 3.3 211 chr2R 19168689 intron CG10737 + chr2R 19168794 intron CG10737 + chr2R 19168900 intron CG10737 + chr2R_17_19165001 chr2R_19165001 RAL-373_125b 1294 chr2R 19280162 19280185 chr2R 19286117 19286151 8 5960 42.5 46.0 44.2 0.2 5989 chr2R 19280162 3` UTR rib + chr2R 19283156 exon CG11906 - chr2R 19286151 exon CG10474 - chr2R_8_19280001 chr2R_19280001 RAL-373_125b 1295 chr2R 19280199 19280220 chr2R 19286154 19286181 9 5962 49.5 39.5 44.5 0.2 5982 chr2R 19280199 3` UTR rib + chr2R 19283190 exon CG11906 - chr2R 19286181 exon CG10474 - chr2R_9_19280001 chr2R_19280001 RAL-373_125b 1296 chr2R 19300926 19300986 chr2R 19301048 19301120 15 132 0.0 3.5 1.8 5.4 194 chr2R 19300926 intron Tab2 + chr2R 19301023 intron Tab2 + chr2R 19301120 intron Tab2 + chr2R_15_19300001 chr2R_19300001 RAL-373_125b 1297 chr2R 19363142 19363211 chr2R 19363267 19363332 10 124 3.0 1.0 2.0 3.3 190 chr2R 19363142 intergenic CG10051 + chr2R 19363237 intergenic CG10051 + chr2R 19363332 intergenic CG10051 + chr2R_10_19360001 chr2R_19360001 RAL-373_125b 1298 chr2R 19376084 19376115 chr2R 19376327 19376358 4 239 2.5 8.0 5.2 0.6 274 chr2R 19376084 intron CG10062 + chr2R 19376221 intron CG10062 + chr2R 19376358 intron CG10062 + chr2R_4_19375001 chr2R_19375001 RAL-373_125b 1299 chr2R 19639536 19639599 chr2R 19639662 19639725 14 125 6.5 6.5 6.5 1.9 189 chr2R 19639536 intergenic not near genes chr2R 19639630 intergenic not near genes chr2R 19639725 intergenic not near genes chr2R_14_19635001 chr2R_19635001 RAL-373_125b 1300 chr2R 19701470 19701545 chr2R 19701604 19701679 15 127 3.0 5.5 4.2 2.9 209 chr2R 19701470 intergenic Obp56c - chr2R 19701574 intergenic Obp56c - chr2R 19701679 intergenic not near genes chr2R_15_19700001 chr2R_19700001 RAL-373_125b 1301 chr2R 19715820 19715832 chr2R 19723339 19723345 blood 5 7516 13.5 5.0 9.2 0.5 7525 chr2R 19715820 intergenic not near genes chr2R 19719582 intergenic not near genes chr2R 19723345 intergenic not near genes chr2R_5_19715001 chr2R_19715001 RAL-373_125b 1302 chr2R 19715838 19715857 chr2R 19723331 19723361 blood 9 7513 9.5 4.0 6.8 1.2 7523 chr2R 19715838 intergenic not near genes chr2R 19719600 intergenic not near genes chr2R 19723361 intergenic not near genes chr2R_9_19715001 chr2R_19715001 RAL-373_125b 1303 chr2R 19776571 19776602 chr2R 19779929 19779975 jockey 12 3367 6.5 10.0 8.2 1.3 3404 chr2R 19776571 intergenic not near genes chr2R 19778273 intergenic not near genes chr2R 19779975 intergenic not near genes chr2R_12_19775001 chr2R_19775001 RAL-373_125b 1304 chr2R 19776604 19776616 chr2R 19779924 19779979 jockey 5 3359 5.0 9.0 7.0 0.6 3375 chr2R 19776604 intergenic not near genes chr2R 19778292 intergenic not near genes chr2R 19779979 intergenic not near genes chr2R_5_19775001 chr2R_19775001 RAL-373_125b 1305 chr2R 19842495 19842567 chr2R 19842669 19842741 8 177 0.0 5.5 2.8 2.1 246 chr2R 19842495 3` UTR CG44569 - chr2R 19842618 3` UTR CG44569 - chr2R 19842741 3` UTR CG44569 - chr2R_8_19840001 chr2R_19840001 RAL-373_125b 1306 chr2R 19899422 19899485 chr2R 19899582 19899655 10 166 5.0 4.0 4.5 1.8 233 chr2R 19899422 intergenic not near genes chr2R 19899538 intergenic not near genes chr2R 19899655 intergenic not near genes chr2R_10_19895001 chr2R_19895001 RAL-373_125b 1307 chr2R 19927425 19927496 chr2R 19927630 19927701 11 193 7.0 1.5 4.2 2.1 276 chr2R 19927425 intergenic not near genes chr2R 19927563 intergenic not near genes chr2R 19927701 intergenic not near genes chr2R_11_19925001 chr2R_19925001 RAL-373_125b 1308 chr2R 19943227 19943295 chr2R 19943387 19943453 18 158 0.0 5.5 2.8 4.7 226 chr2R 19943227 intergenic not near genes chr2R 19943340 intergenic not near genes chr2R 19943453 intergenic not near genes chr2R_18_19940001 chr2R_19940001 RAL-373_125b 1309 chr2R 19957384 19957400 chr2R 19962636 19962636 copia 5 5248 11.0 3.0 7.0 0.6 5252 chr2R 19957384 intergenic CG44623 + chr2R 19960010 intergenic not near genes chr2R 19962636 intergenic not near genes chr2R_5_19960001 chr2R_19960001 RAL-373_125b 1310 chr2R 19957401 19957407 chr2R 19962634 19962659 copia 5 5245 10.0 3.0 6.5 0.7 5258 chr2R 19957401 intergenic CG44623 + chr2R 19960030 intergenic not near genes chr2R 19962659 intergenic not near genes chr2R_5_19960001 chr2R_19960001 RAL-373_125b 1311 chr2R 19957409 19957458 chr2R 19962632 19962710 copia 14 5240 6.0 3.0 4.5 2.5 5301 chr2R 19957409 intergenic CG44623 + chr2R 19960060 intergenic not near genes chr2R 19962710 intergenic not near genes chr2R_14_19960001 chr2R_19960001 RAL-373_125b 1312 chr2R 20069235 20069273 chr2R 20071908 20071924 opus 8 2676 0.0 10.0 5.0 1.3 2689 chr2R 20069235 intergenic not near genes chr2R 20070580 intergenic not near genes chr2R 20071924 intergenic not near genes chr2R_8_20070001 chr2R_20070001 RAL-373_125b 1313 chr2R 20079818 20079866 chr2R 20079934 20079995 8 125 1.0 12.5 6.8 1.0 177 chr2R 20079818 intergenic not near genes chr2R 20079906 intergenic not near genes chr2R 20079995 intergenic not near genes chr2R_8_20075001 chr2R_20075001 RAL-373_125b 1314 chr2R 20095358 20095422 chr2R 20095511 20095583 16 158 4.0 8.0 6.0 2.3 225 chr2R 20095358 intergenic not near genes chr2R 20095470 intergenic not near genes chr2R 20095583 intergenic not near genes chr2R_16_20095001 chr2R_20095001 RAL-373_125b 1315 chr2R 20118832 20118847 chr2R 20118965 20118985 6 135 2.5 7.0 4.8 1.0 153 chr2R 20118832 intergenic not near genes chr2R 20118908 intergenic not near genes chr2R 20118985 intergenic not near genes chr2R_6_20115001 chr2R_20115001 RAL-373_125b 1316 chr2R 20118851 20118903 chr2R 20118989 20119041 12 133 1.0 11.5 6.2 1.7 190 chr2R 20118851 intergenic not near genes chr2R 20118946 intergenic not near genes chr2R 20119041 intergenic not near genes chr2R_12_20115001 chr2R_20115001 RAL-373_125b 1317 chr2R 20172593 20172654 chr2R 20172959 20173020 12 364 4.5 4.0 4.2 2.3 427 chr2R 20172593 intergenic not near genes chr2R 20172806 intergenic not near genes chr2R 20173020 intergenic not near genes chr2R_12_20170001 chr2R_20170001 RAL-373_125b 1318 chr2R 20223530 20223615 chr2R 20223673 20223726 24 136 3.5 3.0 3.2 5.7 196 chr2R 20223530 intergenic not near genes chr2R 20223628 intergenic not near genes chr2R 20223726 intergenic not near genes chr2R_24_20220001 chr2R_20220001 RAL-373_125b 1319 chr2R 20230758 20230811 chr2R 20230867 20230949 13 131 8.0 1.5 4.8 2.2 191 chr2R 20230758 intergenic not near genes chr2R 20230854 intergenic not near genes chr2R 20230949 intergenic not near genes chr2R_13_20230001 chr2R_20230001 RAL-373_125b 1320 chr2R 20384500 20384540 chr2R 20384635 20384675 5 135 1.0 6.5 3.8 1.0 175 chr2R 20384500 intergenic not near genes chr2R 20384588 intergenic not near genes chr2R 20384675 intergenic not near genes chr2R_5_20380001 chr2R_20380001 RAL-373_125b 1321 chr2R 20439013 20439087 chr2R 20439146 20439218 21 116 3.0 4.0 3.5 4.7 205 chr2R 20439013 intron CG12484 + chr2R 20439116 intron CG12484 + chr2R 20439218 intron CG12484 + chr2R_21_20435001 chr2R_20435001 RAL-373_125b 1322 chr2R 20466050 20466131 chr2R 20466221 20466265 8 163 2.0 2.5 2.2 2.5 215 chr2R 20466050 intron CG12484 + chr2R 20466158 intron CG12484 + chr2R 20466265 intron CG12484 + chr2R_8_20465001 chr2R_20465001 RAL-373_125b 1323 chr2R 20496959 20497010 chr2R 20497152 20497203 12 184 3.5 5.5 4.5 2.2 244 chr2R 20496959 intergenic not near genes chr2R 20497081 intergenic not near genes chr2R 20497203 intergenic not near genes chr2R_12_20495001 chr2R_20495001 RAL-373_125b 1324 chr2R 20523008 20523069 chr2R 20523159 20523207 14 148 4.5 6.0 5.2 2.3 199 chr2R 20523008 intergenic not near genes chr2R 20523108 intergenic not near genes chr2R 20523207 intergenic not near genes chr2R_14_20520001 chr2R_20520001 RAL-373_125b 1325 chr2R 20533808 20533908 chr2R 20533985 20534075 5 172 0.0 0.0 0.0 5.0 267 chr2R 20533808 3` UTR CG30154 + chr2R 20533942 intergenic CG30154 +,CG18067 + chr2R 20534075 intergenic CG30154 +,CG18067 + chr2R_5_20530001 chr2R_20530001 RAL-373_125b 1326 chr2R 20535523 20535593 chr2R 20535651 20535660 10 113 8.0 1.5 4.8 1.7 137 chr2R 20535523 3` UTR CG18067 + chr2R 20535592 3` UTR CG18067 + chr2R 20535660 3` UTR CG18067 + chr2R_10_20535001 chr2R_20535001 RAL-373_125b 1327 chr2R 20541945 20542000 chr2R 20542073 20542127 19 126 9.0 13.0 11.0 1.6 182 chr2R 20541945 intergenic not near genes chr2R 20542036 intergenic not near genes chr2R 20542127 intergenic not near genes chr2R_19_20540001 chr2R_20540001 RAL-373_125b 1328 chr2R 20555289 20555336 chr2R 20555431 20555478 14 134 6.5 5.0 5.8 2.1 189 chr2R 20555289 intergenic not near genes chr2R 20555384 intergenic not near genes chr2R 20555478 intergenic not near genes chr2R_14_20555001 chr2R_20555001 RAL-373_125b 1329 chr2R 20577054 20577096 chr2R 20577177 20577214 10 128 3.5 0.0 1.8 3.6 160 chr2R 20577054 intron qsm - chr2R 20577134 intron qsm - chr2R 20577214 intron qsm - chr2R_10_20575001 chr2R_20575001 RAL-373_125b 1330 chr2R 20590627 20590658 chr2R 20590756 20590782 8 127 4.0 3.5 3.8 1.7 155 chr2R 20590627 intron bl + chr2R 20590704 intron bl + chr2R 20590782 intron bl + chr2R_8_20590001 chr2R_20590001 RAL-373_125b 1331 chr2R 20601668 20601740 chr2R 20601803 20601873 8 130 3.5 5.0 4.2 1.5 205 chr2R 20601668 intron bl + chr2R 20601770 intron bl + chr2R 20601873 intron bl + chr2R_8_20600001 chr2R_20600001 RAL-373_125b 1332 chr2R 20601743 20601752 chr2R 20601843 20601887 5 127 3.0 12.5 7.8 0.6 144 chr2R 20601743 intron bl + chr2R 20601815 intron bl + chr2R 20601887 intron bl + chr2R_5_20600001 chr2R_20600001 RAL-373_125b 1333 chr2R 20690710 20690787 chr2R 20690836 20690888 23 117 7.0 5.0 6.0 3.3 178 chr2R 20690710 intergenic not near genes chr2R 20690799 intergenic not near genes chr2R 20690888 intergenic not near genes chr2R_23_20690001 chr2R_20690001 RAL-373_125b 1334 chr2R 20715919 20715983 chr2R 20716042 20716122 16 134 4.5 3.5 4.0 3.2 203 chr2R 20715919 intron dpr + chr2R 20716020 intron dpr + chr2R 20716122 intron dpr + chr2R_16_20715001 chr2R_20715001 RAL-373_125b 1335 chr2R 20739427 20739472 chr2R 20744225 20744289 F-element 16 4811 6.0 11.5 8.8 1.6 4862 chr2R 20739427 intron dpr + chr2R 20741858 intron dpr + chr2R 20744289 intron dpr + chr2R_16_20740001 chr2R_20740001 RAL-373_125b 1336 chr2R 20755836 20755871 chr2R 20755986 20755999 9 147 8.0 6.0 7.0 1.1 163 chr2R 20755836 intergenic not near genes chr2R 20755918 intergenic not near genes chr2R 20755999 intergenic not near genes chr2R_9_20755001 chr2R_20755001 RAL-373_125b 1337 chr2R 20757424 20757448 chr2R 20757551 20757575 5 126 2.0 10.5 6.2 0.7 151 chr2R 20757424 intergenic not near genes chr2R 20757500 intergenic not near genes chr2R 20757575 intergenic not near genes chr2R_5_20755001 chr2R_20755001 RAL-373_125b 1338 chr2R 20783264 20783310 chr2R 20788083 20788132 F-element 8 4819 6.5 4.0 5.2 1.3 4868 chr2R 20783264 intergenic not near genes chr2R 20785698 intergenic not near genes chr2R 20788132 intergenic CG43666 - chr2R_8_20785001 chr2R_20785001 RAL-373_125b 1339 chr2R 20838764 20838829 chr2R 20839125 20839169 20 351 4.0 6.0 5.0 3.3 405 chr2R 20838764 intergenic CR44667 + chr2R 20838966 intergenic CR44667 + chr2R 20839169 intergenic CR44667 + chr2R_20_20835001 chr2R_20835001 RAL-373_125b 1340 chr2R 20916397 20916467 chr2R 20916577 20916601 13 173 4.0 5.5 4.8 2.2 204 chr2R 20916397 intergenic Rx + chr2R 20916499 intergenic Rx + chr2R 20916601 intergenic Rx + chr2R_13_20915001 chr2R_20915001 RAL-373_125b 1341 chr2R 20942350 20942374 chr2R 20942492 20942522 13 147 0.0 7.0 3.5 2.9 172 chr2R 20942350 intergenic not near genes chr2R 20942436 intergenic not near genes chr2R 20942522 intergenic not near genes chr2R_13_20940001 chr2R_20940001 RAL-373_125b 1342 chr2R 20962863 20962935 chr2R 20963011 20963083 11 147 5.0 5.5 5.2 1.8 220 chr2R 20962863 intergenic not near genes chr2R 20962973 intergenic not near genes chr2R 20963083 intergenic not near genes chr2R_11_20960001 chr2R_20960001 RAL-373_125b 1343 chr2R 20966981 20967057 chr2R 20967108 20967184 10 126 3.5 0.0 1.8 3.6 203 chr2R 20966981 intergenic not near genes chr2R 20967082 intergenic not near genes chr2R 20967184 intergenic not near genes chr2R_10_20965001 chr2R_20965001 RAL-373_125b 1344 chr2R 21057445 21057515 chr2R 21057571 21057650 6 130 5.5 0.0 2.8 1.6 205 chr2R 21057445 intergenic shg -,cpa + chr2R 21057548 intergenic cpa +,shg - chr2R 21057650 intergenic cpa +,shg - chr2R_6_21055001 chr2R_21055001 RAL-373_125b 1345 chr2R 21151104 21151145 chr2R 21153766 21153828 opus 4 2675 0.0 5.5 2.8 1.1 2724 chr2R 21151104 intron CG30389 - chr2R 21152466 intron CG30389 - chr2R 21153828 intron CG30389 - chr2R_4_21150001 chr2R_21150001 RAL-373_125b 1346 chr2R 21182917 21182933 chr2R 21183174 21183208 6 271 4.5 6.0 5.2 1.0 291 chr2R 21182917 intergenic Pu +,tud + chr2R 21183062 intergenic tud +,Pu + chr2R 21183208 intergenic tud + chr2R_6_21180001 chr2R_21180001 RAL-373_125b 1347 chr2R 21188167 21188250 chr2R 21188298 21188376 10 130 7.0 7.5 7.2 1.2 209 chr2R 21188167 exon tud + chr2R 21188272 intron tud + chr2R 21188376 exon tud + chr2R_10_21185001 chr2R_21185001 RAL-373_125b 1348 chr2R 21208804 21208863 chr2R 21209087 21209099 5 278 0.5 7.0 3.8 1.0 295 chr2R 21208804 intron,intron CG44245 +,Glycogenin + chr2R 21208952 intron,intron CG44245 +,Glycogenin + chr2R 21209099 intron,intron CG44245 +,Glycogenin + chr2R_5_21205001 chr2R_21205001 RAL-373_125b 1349 chr2R 21277568 21277634 chr2R 21277825 21277891 17 255 3.5 4.5 4.0 3.4 323 chr2R 21277568 intron Rgk3 + chr2R 21277730 intron Rgk3 + chr2R 21277891 intron Rgk3 + chr2R_17_21275001 chr2R_21275001 RAL-373_125b 1350 chr2R 21285386 21285435 chr2R 21285513 21285562 14 125 5.0 7.0 6.0 2.0 176 chr2R 21285386 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285474 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285562 3` UTR,3` UTR MFS16 +,CG10505 - chr2R_14_21285001 chr2R_21285001 RAL-373_125b 1351 chr2R 21421293 21421341 chr2R 21421422 21421470 15 127 10.0 6.0 8.0 1.7 177 chr2R 21421293 intron Sdc - chr2R 21421382 intron Sdc - chr2R 21421470 intron Sdc - chr2R_15_21420001 chr2R_21420001 RAL-373_125b 1352 chr2R 21475626 21475700 chr2R 21475792 21475861 22 161 3.0 7.0 5.0 3.7 235 chr2R 21475626 intron Sdc - chr2R 21475744 intron Sdc - chr2R 21475861 intron Sdc - chr2R_22_21475001 chr2R_21475001 RAL-373_125b 1353 chr2R 21478245 21478303 chr2R 21478477 21478540 24 234 3.5 4.0 3.8 5.0 295 chr2R 21478245 intron Sdc - chr2R 21478392 intron Sdc - chr2R 21478540 intron Sdc - chr2R_24_21475001 chr2R_21475001 RAL-373_125b 1354 chr2R 21539304 21539373 chr2R 21539460 21539529 10 152 4.0 4.5 4.2 1.9 225 chr2R 21539304 intron Egfr + chr2R 21539416 intron Egfr + chr2R 21539529 intron Egfr + chr2R_10_21535001 chr2R_21535001 RAL-373_125b 1355 chr2R 21540661 21540680 chr2R 21540929 21540948 6 267 9.5 4.5 7.0 0.8 287 chr2R 21540661 intron Egfr + chr2R 21540804 intron Egfr + chr2R 21540948 intron Egfr + chr2R_6_21540001 chr2R_21540001 RAL-373_125b 1356 chr2R 21546759 21546820 chr2R 21546870 21546935 12 98 5.0 5.5 5.2 1.9 176 chr2R 21546759 intron Egfr + chr2R 21546847 intron Egfr + chr2R 21546935 intron Egfr + chr2R_12_21545001 chr2R_21545001 RAL-373_125b 1357 chr2R 21710907 21710954 chr2R 21711039 21711068 11 129 6.5 2.5 4.5 2.0 161 chr2R 21710907 intron,intron HmgD +,CG30403 - chr2R 21710988 intron,intron HmgD +,CG30403 - chr2R 21711068 intron,intron HmgD +,CG30403 - chr2R_11_21710001 chr2R_21710001 RAL-373_125b 1358 chr2R 21721541 21721610 chr2R 21721666 21721747 8 135 3.0 0.0 1.5 3.2 206 chr2R 21721541 intron LBR + chr2R 21721644 intron LBR + chr2R 21721747 intron LBR + chr2R_8_21720001 chr2R_21720001 RAL-373_125b 1359 chr2R 21732138 21732164 chr2R 21732272 21732298 5 131 0.0 14.0 7.0 0.6 160 chr2R 21732138 intergenic not near genes chr2R 21732218 intergenic not near genes chr2R 21732298 intergenic not near genes chr2R_5_21730001 chr2R_21730001 RAL-373_125b 1360 chr2R 21738247 21738263 chr2R 21747443 21747474 roo 7 9199 8.0 5.0 6.5 0.9 9227 chr2R 21738247 intergenic not near genes chr2R 21742860 intergenic not near genes chr2R 21747474 intergenic not near genes chr2R_7_21740001 chr2R_21740001 RAL-373_125b 1361 chr2R 21753045 21753110 chr2R 21753574 21753645 roo 31 531 6.5 9.0 7.8 3.5 600 chr2R 21753045 intergenic not near genes chr2R 21753345 intergenic not near genes chr2R 21753645 intergenic not near genes chr2R_31_21750001 chr2R_21750001 RAL-373_125b 1362 chr2R 21809474 21809513 chr2R 21817764 21817803 roo 15 8288 3.0 5.5 4.2 2.9 8329 chr2R 21809474 intergenic not near genes chr2R 21813638 intergenic not near genes chr2R 21817803 intergenic not near genes chr2R_15_21810001 chr2R_21810001 RAL-373_125b 1363 chr2R 21857300 21857369 chr2R 21857441 21857510 16 136 6.5 8.0 7.2 2.0 210 chr2R 21857300 intergenic not near genes chr2R 21857405 intergenic not near genes chr2R 21857510 intergenic not near genes chr2R_16_21855001 chr2R_21855001 RAL-373_125b 1364 chr2R 21888260 21888321 chr2R 21888407 21888457 13 144 1.5 6.0 3.8 2.7 197 chr2R 21888260 intron Fili + chr2R 21888358 intron Fili + chr2R 21888457 intron Fili + chr2R_13_21885001 chr2R_21885001 RAL-373_125b 1365 chr2R 21919833 21919901 chr2R 21919971 21920006 11 131 3.0 6.0 4.5 2.0 173 chr2R 21919833 intron Fili + chr2R 21919920 intron Fili + chr2R 21920006 intron Fili + chr2R_11_21915001 chr2R_21915001 RAL-373_125b 1366 chr2R 21985496 21985563 chr2R 21985621 21985694 19 130 3.0 5.0 4.0 3.8 198 chr2R 21985496 intergenic CG30401 - chr2R 21985595 intergenic CG30401 - chr2R 21985694 3` UTR CG30401 - chr2R_19_21985001 chr2R_21985001 RAL-373_125b 1367 chr2R 21997012 21997071 chr2R 21997422 21997481 13 409 2.5 4.5 3.5 2.9 469 chr2R 21997012 intron CG34370 - chr2R 21997246 intron CG34370 - chr2R 21997481 intron CG34370 - chr2R_13_21995001 chr2R_21995001 RAL-373_125b 1368 chr2R 22004256 22004320 chr2R 22004400 22004464 11 143 3.5 3.5 3.5 2.4 208 chr2R 22004256 intron CG34370 - chr2R 22004360 intron CG34370 - chr2R 22004464 intron CG34370 - chr2R_11_22000001 chr2R_22000001 RAL-373_125b 1369 chr2R 22029490 22029525 chr2R 22029615 22029653 7 127 5.5 1.5 3.5 1.6 163 chr2R 22029490 intron CG34370 - chr2R 22029572 intron CG34370 - chr2R 22029653 intron CG34370 - chr2R_7_22025001 chr2R_22025001 RAL-373_125b 1370 chr2R 22037738 22037788 chr2R 22037870 22037905 7 129 7.0 0.0 3.5 1.6 167 chr2R 22037738 intron CG34370 - chr2R 22037822 intron CG34370 - chr2R 22037905 intron CG34370 - chr2R_7_22035001 chr2R_22035001 RAL-373_125b 1371 chr2R 22087635 22087708 chr2R 22087771 22087834 14 134 5.0 7.0 6.0 2.0 199 chr2R 22087635 intron CG13502 - chr2R 22087734 intron CG13502 - chr2R 22087834 intron CG13502 - chr2R_14_22085001 chr2R_22085001 RAL-373_125b 1372 chr2R 22090024 22090079 chr2R 22090137 22090206 11 128 5.0 0.5 2.8 2.9 182 chr2R 22090024 3` UTR CG43393 - chr2R 22090115 3` UTR CG43393 - chr2R 22090206 exon CG43393 - chr2R_11_22090001 chr2R_22090001 RAL-373_125b 1373 chr2R 22095936 22095964 chr2R 22096053 22096097 8 131 7.0 10.5 8.8 0.8 161 chr2R 22095936 intron CG11073 - chr2R 22096016 intron CG11073 - chr2R 22096097 intron CG11073 - chr2R_8_22095001 chr2R_22095001 RAL-373_125b 1374 chr2R 22095966 22095984 chr2R 22096084 22096116 9 130 4.0 16.0 10.0 0.8 150 chr2R 22095966 intron CG11073 - chr2R 22096041 intron CG11073 - chr2R 22096116 intron CG11073 - chr2R_9_22095001 chr2R_22095001 RAL-373_125b 1375 chr2R 22099833 22099883 chr2R 22099958 22100008 12 127 2.0 6.5 4.2 2.3 175 chr2R 22099833 intergenic CG11073 - chr2R 22099920 intergenic CG11073 - chr2R 22100008 intergenic CG11073 - chr2R_12_22095001 chr2R_22095001 RAL-373_125b 1376 chr2R 22120780 22120804 chr2R 22121027 22121051 4 250 0.0 3.5 1.8 1.4 271 chr2R 22120780 intron Vrp1 - chr2R 22120916 intron Vrp1 - chr2R 22121051 intron Vrp1 - chr2R_4_22120001 chr2R_22120001 RAL-373_125b 1377 chr2R 22178718 22178773 chr2R 22178849 22178909 6 134 0.0 9.5 4.8 1.0 191 chr2R 22178718 intron CG11170 - chr2R 22178814 intron CG11170 - chr2R 22178909 intron CG11170 - chr2R_6_22175001 chr2R_22175001 RAL-373_125b 1378 chr2R 22179211 22179235 chr2R 22179360 22179391 9 149 0.0 10.0 5.0 1.5 180 chr2R 22179211 intron CG11170 - chr2R 22179301 intron CG11170 - chr2R 22179391 intron CG11170 - chr2R_9_22175001 chr2R_22175001 RAL-373_125b 1379 chr2R 22185628 22185703 chr2R 22185777 22185852 10 146 3.0 0.0 1.5 4.0 224 chr2R 22185628 exon MED16 + chr2R 22185740 3` UTR MED16 + chr2R 22185852 3` UTR MED16 + chr2R_10_22185001 chr2R_22185001 RAL-373_125b 1380 chr2R 22349656 22349702 chr2R 22351490 22351530 jockey 11 1832 10.0 8.0 9.0 1.1 1874 chr2R 22349656 intron Liprin-gamma - chr2R 22350593 intron Liprin-gamma - chr2R 22351530 intron Liprin-gamma - chr2R_11_22350001 chr2R_22350001 RAL-373_125b 1381 chr2R 22370744 22370783 chr2R 22370865 22370908 9 125 2.0 2.5 2.2 2.8 164 chr2R 22370744 intron Liprin-gamma - chr2R 22370826 intron Liprin-gamma - chr2R 22370908 intron Liprin-gamma - chr2R_9_22370001 chr2R_22370001 RAL-373_125b 1382 chr2R 22503854 22503881 chr2R 22503999 22504015 9 144 4.0 7.5 5.8 1.3 161 chr2R 22503854 intron px - chr2R 22503934 intron px - chr2R 22504015 intron px - chr2R_9_22500001 chr2R_22500001 RAL-373_125b 1383 chr2R 22506667 22506737 chr2R 22506795 22506864 10 126 2.5 5.0 3.8 2.1 197 chr2R 22506667 intron px - chr2R 22506766 intron px - chr2R 22506864 intron px - chr2R_10_22505001 chr2R_22505001 RAL-373_125b 1384 chr2R 22525712 22525767 chr2R 22529307 22529360 jockey 18 3602 8.5 5.0 6.8 2.3 3648 chr2R 22525712 intron px - chr2R 22527536 intron px - chr2R 22529360 intron px - chr2R_18_22525001 chr2R_22525001 RAL-373_125b 1385 chr2R 22575625 22575691 chr2R 22575749 22575782 17 120 6.0 7.5 6.8 2.2 157 chr2R 22575625 intron dnr1 - chr2R 22575704 intron dnr1 - chr2R 22575782 intron dnr1 - chr2R_17_22575001 chr2R_22575001 RAL-373_125b 1386 chr2R 22580387 22580445 chr2R 22586581 22586639 diver 17 6189 3.0 2.5 2.8 4.5 6252 chr2R 22580387 intron dnr1 - chr2R 22583513 intron dnr1 - chr2R 22586639 intron dnr1 - chr2R_17_22580001 chr2R_22580001 RAL-373_125b 1387 chr2R 22588108 22588148 chr2R 22588243 22588287 7 137 7.0 4.5 5.8 1.0 179 chr2R 22588108 intron dnr1 - chr2R 22588198 intron dnr1 - chr2R 22588287 intron dnr1 - chr2R_7_22585001 chr2R_22585001 RAL-373_125b 1388 chr2R 22666559 22666619 chr2R 22666686 22666749 24 129 3.0 3.5 3.2 5.7 190 chr2R 22666559 3` UTR,intron CR45269 -,CR42868 + chr2R 22666654 5` UTR CR42868 + chr2R 22666749 5` UTR CR42868 + chr2R_24_22665001 chr2R_22665001 RAL-373_125b 1389 chr2R 22774945 22774995 chr2R 22775384 22775459 jockey 6 460 7.5 7.5 7.5 0.7 514 chr2R 22774945 intron CG42260 - chr2R 22775202 intron CG42260 - chr2R 22775459 intron CG42260 - chr2R_6_22775001 chr2R_22775001 RAL-373_125b 1390 chr2R 22785709 22785754 chr2R 22785809 22785882 11 124 1.0 5.0 3.0 2.8 173 chr2R 22785709 intron CG42260 - chr2R 22785796 intron CG42260 - chr2R 22785882 intron CG42260 - chr2R_11_22785001 chr2R_22785001 RAL-373_125b 1391 chr2R 22843020 22843039 chr2R 22845036 22845055 flea 5 2016 5.5 7.5 6.5 0.7 2035 chr2R 22843020 intergenic CG9826 + chr2R 22844038 intergenic not near genes chr2R 22845055 intergenic not near genes chr2R_5_22840001 chr2R_22840001 RAL-373_125b 1392 chr2R 22847691 22847766 chr2R 22847832 22847907 14 140 6.0 5.5 5.8 2.1 216 chr2R 22847691 exon CG3649 + chr2R 22847799 exon CG3649 + chr2R 22847907 3` UTR,3` UTR CG3649 +,CG13531 - chr2R_14_22845001 chr2R_22845001 RAL-373_125b 1393 chr2R 22860729 22860785 chr2R 22860870 22860919 15 139 9.0 0.0 4.5 2.7 190 chr2R 22860729 intergenic not near genes chr2R 22860824 intergenic not near genes chr2R 22860919 intergenic not near genes chr2R_15_22860001 chr2R_22860001 RAL-373_125b 1394 chr2R 22907382 22907430 chr2R 22907495 22907538 14 118 7.5 2.5 5.0 2.3 156 chr2R 22907382 intron nahoda + chr2R 22907460 intron nahoda + chr2R 22907538 intron nahoda + chr2R_14_22905001 chr2R_22905001 RAL-373_125b 1395 chr2R 22908443 22908477 chr2R 22908569 22908601 8 123 5.0 4.5 4.8 1.4 158 chr2R 22908443 intron nahoda + chr2R 22908522 intron nahoda + chr2R 22908601 intron nahoda + chr2R_8_22905001 chr2R_22905001 RAL-373_125b 1396 chr2R 22978250 22978316 chr2R 22978378 22978403 14 124 3.0 7.0 5.0 2.3 153 chr2R 22978250 intergenic not near genes chr2R 22978326 intergenic not near genes chr2R 22978403 intergenic not near genes chr2R_14_22975001 chr2R_22975001 RAL-373_125b 1397 chr2R 22991590 22991660 chr2R 22991726 22991791 14 135 2.0 5.0 3.5 3.1 201 chr2R 22991590 intron twi + chr2R 22991690 intron twi + chr2R 22991791 intron twi + chr2R_14_22990001 chr2R_22990001 RAL-373_125b 1398 chr2R 23041153 23041197 chr2R 23041281 23041320 15 126 7.0 6.5 6.8 1.9 167 chr2R 23041153 intron,intron twi +,CG42741 - chr2R 23041236 intron,intron twi +,CG42741 - chr2R 23041320 intron,intron twi +,CG42741 - chr2R_15_23040001 chr2R_23040001 RAL-373_125b 1399 chr2R 23134805 23134850 chr2R 23134926 23134942 11 121 3.0 10.5 6.8 1.4 137 chr2R 23134805 intergenic not near genes chr2R 23134874 intergenic not near genes chr2R 23134942 intergenic not near genes chr2R_11_23130001 chr2R_23130001 RAL-373_125b 1400 chr2R 23161977 23162042 chr2R 23162140 23162205 18 160 5.5 8.5 7.0 2.2 228 chr2R 23161977 exon CG9899 + chr2R 23162091 intergenic CG9899 + chr2R 23162205 intergenic CG9899 + chr2R_18_23160001 chr2R_23160001 RAL-373_125b 1401 chr2R 23188514 23188573 chr2R 23188642 23188701 8 127 5.0 5.0 5.0 1.3 187 chr2R 23188514 intron CG34371 - chr2R 23188608 intron CG34371 - chr2R 23188701 intron CG34371 - chr2R_8_23185001 chr2R_23185001 RAL-373_125b 1402 chr2R 23207809 23207851 chr2R 23207936 23207970 4 122 9.0 4.5 6.8 0.5 161 chr2R 23207809 intergenic not near genes chr2R 23207890 intergenic not near genes chr2R 23207970 intergenic not near genes chr2R_4_23205001 chr2R_23205001 RAL-373_125b 1403 chr2R 23218967 23219016 chr2R 23219249 23219299 5 276 7.5 0.0 3.8 1.0 332 chr2R 23218967 intergenic not near genes chr2R 23219133 intergenic not near genes chr2R 23219299 intergenic not near genes chr2R_5_23215001 chr2R_23215001 RAL-373_125b 1404 chr2R 23236838 23236850 chr2R 23236969 23236984 4 138 3.0 10.0 6.5 0.5 146 chr2R 23236838 intergenic not near genes chr2R 23236911 intergenic not near genes chr2R 23236984 intergenic not near genes chr2R_4_23235001 chr2R_23235001 RAL-373_125b 1405 chr2R 23256015 23256038 chr2R 23256141 23256157 6 116 12.0 6.5 9.2 0.6 142 chr2R 23256015 intergenic not near genes chr2R 23256086 intergenic not near genes chr2R 23256157 intergenic not near genes chr2R_6_23255001 chr2R_23255001 RAL-373_125b 1406 chr2R 23256039 23256081 chr2R 23256140 23256155 14 112 6.5 6.0 6.2 1.9 116 chr2R 23256039 intergenic not near genes chr2R 23256097 intergenic not near genes chr2R 23256155 intergenic not near genes chr2R_14_23255001 chr2R_23255001 RAL-373_125b 1407 chr2R 23291278 23291328 chr2R 23291406 23291435 12 124 6.0 0.0 3.0 3.0 157 chr2R 23291278 3` UTR CR44783 - chr2R 23291356 3` UTR CR44783 - chr2R 23291435 intergenic CR44783 - chr2R_12_23290001 chr2R_23290001 RAL-373_125b 1408 chr2R 23402586 23402610 chr2R 23407683 23407707 flea 5 5096 2.0 4.0 3.0 1.2 5121 chr2R 23402586 intergenic CG3520 - chr2R 23405146 intergenic not near genes chr2R 23407707 intergenic not near genes chr2R_5_23405001 chr2R_23405001 RAL-373_125b 1409 chr2R 23409739 23409813 chr2R 23409883 23409947 14 138 4.5 6.0 5.2 2.3 208 chr2R 23409739 intergenic not near genes chr2R 23409843 intergenic not near genes chr2R 23409947 intergenic not near genes chr2R_14_23405001 chr2R_23405001 RAL-373_125b 1410 chr2R 23423703 23423768 chr2R 23423900 23423969 13 204 2.5 6.0 4.2 2.5 266 chr2R 23423703 intron CG9815 - chr2R 23423836 intron CG9815 - chr2R 23423969 intron CG9815 - chr2R_13_23420001 chr2R_23420001 RAL-373_125b 1411 chr2R 23508875 23508941 chr2R 23509037 23509108 19 165 5.0 4.0 4.5 3.5 233 chr2R 23508875 intergenic not near genes chr2R 23508992 intergenic not near genes chr2R 23509108 intergenic not near genes chr2R_19_23505001 chr2R_23505001 RAL-373_125b 1412 chr2R 23522370 23522441 chr2R 23522499 23522527 11 120 8.0 5.5 6.8 1.4 157 chr2R 23522370 intron RabX1 - chr2R 23522448 intron RabX1 - chr2R 23522527 intron RabX1 - chr2R_11_23520001 chr2R_23520001 RAL-373_125b 1413 chr2R 23529547 23529589 chr2R 23537153 23537210 412 10 7611 9.0 8.5 8.8 1.0 7663 chr2R 23529547 intron bw - chr2R 23533378 intron bw - chr2R 23537210 exon bw - chr2R_10_23530001 chr2R_23530001 RAL-373_125b 1414 chr2R 23529591 23529604 chr2R 23537150 23537185 412 4 7580 6.0 7.5 6.8 0.5 7594 chr2R 23529591 exon bw - chr2R 23533388 intron bw - chr2R 23537185 exon bw - chr2R_4_23530001 chr2R_23530001 RAL-373_125b 1415 chr2R 23589137 23589182 chr2R 23589259 23589293 15 122 7.5 10.5 9.0 1.5 156 chr2R 23589137 intron apt + chr2R 23589215 intron apt + chr2R 23589293 intron apt + chr2R_15_23585001 chr2R_23585001 RAL-373_125b 1416 chr2R 23606989 23607191 chr2R 23607120 23607334 33 134 0.0 0.0 0.0 33.0 345 chr2R 23606989 intron CG17664 - chr2R 23607162 intron CG17664 - chr2R 23607334 intron CG17664 - chr2R_33_23605001 chr2R_23605001 RAL-373_125b 1417 chr2R 23607331 23607408 chr2R 23607505 23607585 17 174 2.5 3.5 3.0 4.2 254 chr2R 23607331 intron CG17664 - chr2R 23607458 intron CG17664 - chr2R 23607585 intron CG17664 - chr2R_17_23605001 chr2R_23605001 RAL-373_125b 1418 chr2R 23679423 23679447 chr2R 23679550 23679563 9 125 14.0 1.0 7.5 1.1 140 chr2R 23679423 3` UTR Pde8 + chr2R 23679493 3` UTR Pde8 + chr2R 23679563 3` UTR Pde8 + chr2R_9_23675001 chr2R_23675001 RAL-373_125b 1419 chr2R 23739715 23739785 chr2R 23739866 23739931 4 144 0.0 6.5 3.2 1.0 216 chr2R 23739715 intron egl - chr2R 23739823 intron egl - chr2R 23739931 intron egl - chr2R_4_23735001 chr2R_23735001 RAL-373_125b 1420 chr2R 23819104 23819135 chr2R 23819241 23819280 9 143 10.0 3.5 6.8 1.2 176 chr2R 23819104 intergenic not near genes chr2R 23819192 intergenic not near genes chr2R 23819280 intergenic not near genes chr2R_9_23815001 chr2R_23815001 RAL-373_125b 1421 chr2R 23819866 23819939 chr2R 23820007 23820079 13 139 9.5 3.0 6.2 1.8 213 chr2R 23819866 intergenic CG5549 + chr2R 23819972 intergenic CG5549 + chr2R 23820079 intergenic CG5549 + chr2R_13_23815001 chr2R_23815001 RAL-373_125b 1422 chr2R 23824115 23824131 chr2R 23824256 23824272 4 140 9.0 7.0 8.0 0.4 157 chr2R 23824115 intron,intron CG5549 +,CG4763 - chr2R 23824194 intron,intron CG5549 +,CG4763 - chr2R 23824272 intron,intron CG5549 +,CG4763 - chr2R_4_23820001 chr2R_23820001 RAL-373_125b 1423 chr2R 23824138 23824167 chr2R 23824253 23824308 10 132 5.5 7.0 6.2 1.4 170 chr2R 23824138 intron,intron CG5549 +,CG4763 - chr2R 23824223 intron,intron CG5549 +,CG4763 - chr2R 23824308 intron,intron CG5549 +,CG4763 - chr2R_10_23820001 chr2R_23820001 RAL-373_125b 1424 chr2R 23840750 23840754 chr2R 23840889 23840894 5 140 7.5 2.0 4.8 0.9 144 chr2R 23840750 5` UTR CR44805 + chr2R 23840822 intergenic CR44805 + chr2R 23840894 intergenic CR44805 + chr2R_5_23840001 chr2R_23840001 RAL-373_125b 1425 chr2R 23914248 23914324 chr2R 23921922 23921988 412 26 7669 8.5 7.5 8.0 2.9 7740 chr2R 23914248 exon kcc + chr2R 23918118 intron kcc + chr2R 23921988 exon kcc + chr2R_26_23915001 chr2R_23915001 RAL-373_125b 1426 chr2R 23986482 23986535 chr2R 23986612 23986665 15 128 4.0 9.0 6.5 2.0 183 chr2R 23986482 intron Phm - chr2R 23986574 intron Phm - chr2R 23986665 intron,5` UTR Phm -,CG30178 + chr2R_15_23985001 chr2R_23985001 RAL-373_125b 1427 chr2R 24031335 24031408 chr2R 24031468 24031542 23 131 9.5 7.5 8.5 2.4 207 chr2R 24031335 5` UTR CG30172 - chr2R 24031438 intergenic CG30172 -,Chi - chr2R 24031542 3` UTR Chi - chr2R_23_24030001 chr2R_24030001 RAL-373_125b 1428 chr2R 24147057 24147095 chr2R 24154665 24154700 412 10 7615 3.5 11.5 7.5 1.2 7643 chr2R 24147057 intron Dat + chr2R 24150878 intron Dat + chr2R 24154700 intron Dat + chr2R_10_24150001 chr2R_24150001 RAL-373_125b 1429 chr2R 24177193 24177262 chr2R 24184722 24184797 412 21 7530 6.5 7.0 6.8 2.7 7604 chr2R 24177193 3` UTR Nop60B + chr2R 24180995 intron Nop60B + chr2R 24184797 intron Nop60B + chr2R_21_24180001 chr2R_24180001 RAL-373_125b 1430 chr2R 24212251 24212314 chr2R 24212388 24212462 21 140 8.0 5.0 6.5 2.8 211 chr2R 24212251 intergenic CG30419 - chr2R 24212356 intergenic CG30419 - chr2R 24212462 intergenic CG30419 - chr2R_21_24210001 chr2R_24210001 RAL-373_125b 1431 chr2R 24272779 24272811 chr2R 24272904 24272927 roo 6 124 11.0 11.0 11.0 0.5 148 chr2R 24272779 intergenic not near genes chr2R 24272853 intergenic not near genes chr2R 24272927 intergenic not near genes chr2R_6_24270001 chr2R_24270001 RAL-373_125b 1432 chr2R 24291912 24291975 chr2R 24292084 24292145 19 174 6.5 4.0 5.2 3.1 233 chr2R 24291912 intergenic not near genes chr2R 24292028 intergenic not near genes chr2R 24292145 intergenic not near genes chr2R_19_24290001 chr2R_24290001 RAL-373_125b 1433 chr2R 24321507 24321553 chr2R 24321609 24321681 18 114 8.0 2.5 5.2 2.9 174 chr2R 24321507 intergenic not near genes chr2R 24321594 intergenic not near genes chr2R 24321681 intergenic not near genes chr2R_18_24320001 chr2R_24320001 RAL-373_125b 1434 chr2R 24323573 24323648 chr2R 24323716 24323774 20 137 7.0 5.0 6.0 2.9 201 chr2R 24323573 intergenic not near genes chr2R 24323674 intergenic not near genes chr2R 24323774 intergenic not near genes chr2R_20_24320001 chr2R_24320001 RAL-373_125b 1435 chr2R 24353390 24353409 chr2R 24361796 24361821 roo 7 8407 16.0 8.0 12.0 0.5 8431 chr2R 24353390 intron,intron bs +,CR44811 - chr2R 24357606 intron,intron bs +,CR44811 - chr2R 24361821 intron,intron bs +,CR44811 - chr2R_7_24355001 chr2R_24355001 RAL-373_125b 1436 chr2R 24430705 24430944 chr2R 24430888 24431082 9 139 0.0 0.0 0.0 9.0 377 chr2R 24430705 intergenic CG15873 - chr2R 24430894 intergenic CG15873 -,Pgam5-2 - chr2R 24431082 intergenic Pgam5-2 -,CG15873 - chr2R_9_24430001 chr2R_24430001 RAL-373_125b 1437 chr2R 24542572 24542623 chr2R 24542692 24542769 19 141 4.5 1.5 3.0 4.8 197 chr2R 24542572 intron,intron CG4622 -,ITP + chr2R 24542670 intron,intron CG4622 -,ITP + chr2R 24542769 intron,intron CG4622 -,ITP + chr2R_19_24540001 chr2R_24540001 RAL-373_125b 1438 chr2R 24647528 24647617 chr2R 24655149 24655193 412 12 7605 0.0 6.0 3.0 3.0 7665 chr2R 24647528 intergenic not near genes chr2R 24651360 intergenic not near genes chr2R 24655193 intergenic not near genes chr2R_12_24650001 chr2R_24650001 RAL-373_125b 1439 chr2R 24727848 24727897 chr2R 24735406 24735445 mdg1 12 7550 7.0 6.0 6.5 1.6 7597 chr2R 24727848 intron Mid1 - chr2R 24731646 intron Mid1 - chr2R 24735445 intron Mid1 - chr2R_12_24730001 chr2R_24730001 RAL-373_125b 1440 chr2R 24763583 24763639 chr2R 24765588 24765645 G2 20 2010 4.0 3.5 3.8 4.2 2062 chr2R 24763583 exon CG3894 + chr2R 24764614 intron CG3894 + chr2R 24765645 exon CG3894 + chr2R_20_24760001 chr2R_24760001 RAL-373_125b 1441 chr2R 24812819 24812881 chr2R 24812952 24813014 25 132 6.5 5.0 5.8 3.7 195 chr2R 24812819 intergenic not near genes chr2R 24812916 intergenic not near genes chr2R 24813014 intergenic not near genes chr2R_25_24810001 chr2R_24810001 RAL-373_125b 1442 chr2R 24859796 24859869 chr2R 24859927 24860000 17 126 4.5 1.0 2.8 4.5 204 chr2R 24859796 5` UTR CR44829 + chr2R 24859898 5` UTR CR44829 + chr2R 24860000 5` UTR CR44829 + chr2R_17_24855001 chr2R_24855001 RAL-373_125b 1443 chr2R 24884009 24884079 chr2R 24884135 24884211 25 130 4.5 5.0 4.8 4.3 202 chr2R 24884009 intron NKAIN + chr2R 24884110 intron NKAIN + chr2R 24884211 intron NKAIN + chr2R_25_24880001 chr2R_24880001 RAL-373_125b 1444 chr2R 24893841 24893859 chr2R 24894004 24894037 7 174 14.0 4.0 9.0 0.7 196 chr2R 24893841 intron NaCP60E + chr2R 24893939 intron NaCP60E + chr2R 24894037 intron NaCP60E + chr2R_7_24890001 chr2R_24890001 RAL-373_125b 1445 chr2R 24893861 24893903 chr2R 24894003 24894076 20 167 6.5 4.0 5.2 3.2 215 chr2R 24893861 intron NaCP60E + chr2R 24893968 intron NaCP60E + chr2R 24894076 intron NaCP60E + chr2R_20_24890001 chr2R_24890001 RAL-373_125b 1446 chr2R 24956228 24956280 chr2R 24956349 24956386 14 111 7.0 7.5 7.2 1.7 158 chr2R 24956228 3` UTR CR44830 - chr2R 24956307 3` UTR CR44830 - chr2R 24956386 3` UTR CR44830 - chr2R_14_24955001 chr2R_24955001 RAL-373_125b 1447 chr2R 25014503 25014574 chr2R 25014629 25014695 14 120 5.5 5.0 5.2 2.3 192 chr2R 25014503 intron uzip + chr2R 25014599 intron uzip + chr2R 25014695 intron uzip + chr2R_14_25010001 chr2R_25010001 RAL-373_125b 1448 chr2R 25018307 25018359 chr2R 25018445 25018458 10 142 5.0 8.5 6.8 1.3 151 chr2R 25018307 intron uzip + chr2R 25018382 intron uzip + chr2R 25018458 intron uzip + chr2R_10_25015001 chr2R_25015001 RAL-373_125b 1449 chr2R 25022591 25022653 chr2R 25022725 25022787 15 133 11.0 7.0 9.0 1.5 196 chr2R 25022591 intron uzip + chr2R 25022689 intron uzip + chr2R 25022787 intron uzip + chr2R_15_25020001 chr2R_25020001 RAL-373_125b 1450 chr2R 25061293 25061369 chr2R 25061426 25061457 21 120 6.0 6.5 6.2 2.9 164 chr2R 25061293 intergenic not near genes chr2R 25061375 intergenic not near genes chr2R 25061457 intergenic not near genes chr2R_21_25060001 chr2R_25060001 RAL-373_125b 1451 chr2R 25076518 25076530 chr2R 25076658 25076660 4 134 17.0 27.5 22.2 0.2 142 chr2R 25076518 intron gol - chr2R 25076589 intron gol - chr2R 25076660 intron gol - chr2R_4_25075001 chr2R_25075001 RAL-373_125b 1452 chr2R 25081575 25081637 chr2R 25082701 25082772 11 1139 4.5 8.5 6.5 1.5 1197 chr2R 25081575 intron gol - chr2R 25082174 intron gol - chr2R 25082772 intron gol - chr2R_11_25080001 chr2R_25080001 RAL-373_125b 1453 chr2R 25101231 25101299 chr2R 25101383 25101446 19 148 4.0 4.5 4.2 3.7 215 chr2R 25101231 intron lov - chr2R 25101338 intron lov - chr2R 25101446 intron lov - chr2R_19_25100001 chr2R_25100001 RAL-373_125b 1454 chr2R 25130964 25131008 chr2R 25131091 25131125 7 125 6.0 4.5 5.2 1.1 161 chr2R 25130964 intron lov - chr2R 25131044 intron lov - chr2R 25131125 intron lov - chr2R_7_25130001 chr2R_25130001 RAL-373_125b 1455 chr2R 25141617 25141677 chr2R 25159357 25159417 roo 19 17739 5.0 9.0 7.0 2.4 17800 chr2R 25141617 intergenic not near genes chr2R 25150517 intergenic not near genes chr2R 25159417 intergenic not near genes chr2R_19_25150001 chr2R_25150001 RAL-373_125b 1456 chr2R 25167634 25167699 chr2R 25167766 25167826 13 129 4.5 4.0 4.2 2.5 192 chr2R 25167634 intergenic CG34038 + chr2R 25167730 5` UTR CG34038 + chr2R 25167826 5` UTR CG34038 + chr2R_13_25165001 chr2R_25165001 RAL-373_125b 1457 chr3L 60674 60735 chr3L 60928 60989 5 262 27.5 20.5 24.0 0.2 315 chr3L 60674 intergenic not near genes chr3L 60832 intergenic not near genes chr3L 60989 intergenic not near genes chr3L_5_60001 chr3L_60001 RAL-373_125b 1458 chr3L 68937 68968 chr3L 69074 69093 10 136 13.5 4.5 9.0 1.0 156 chr3L 68937 3` UTR Lsp1gamma + chr3L 69015 intergenic Lsp1gamma +,CR44510 + chr3L 69093 intergenic CR44510 +,Lsp1gamma + chr3L_10_65001 chr3L_65001 RAL-373_125b 1459 chr3L 68972 69002 chr3L 69070 69134 10 130 7.5 4.0 5.8 1.5 162 chr3L 68972 3` UTR Lsp1gamma + chr3L 69053 intergenic Lsp1gamma +,CR44510 + chr3L 69134 intergenic CR44510 +,Lsp1gamma + chr3L_10_65001 chr3L_65001 RAL-373_125b 1460 chr3L 75042 75065 chr3L 76492 76520 7 1449 8.5 4.0 6.2 1.0 1478 chr3L 75042 exon CG13405 - chr3L 75781 intergenic CG13405 - chr3L 76520 intergenic not near genes chr3L_7_75001 chr3L_75001 RAL-373_125b 1461 chr3L 82085 82130 chr3L 82260 82325 10 190 7.5 6.5 7.0 1.2 240 chr3L 82085 intergenic not near genes chr3L 82205 intergenic not near genes chr3L 82325 intergenic not near genes chr3L_10_80001 chr3L_80001 RAL-373_125b 1462 chr3L 93760 93770 chr3L 93878 93880 4 119 10.5 9.0 9.8 0.4 120 chr3L 93760 intergenic not near genes chr3L 93820 intergenic not near genes chr3L 93880 intergenic not near genes chr3L_4_90001 chr3L_90001 RAL-373_125b 1463 chr3L 93775 93814 chr3L 93869 93930 14 110 4.5 8.0 6.2 1.9 155 chr3L 93775 intergenic not near genes chr3L 93852 intergenic not near genes chr3L 93930 intergenic not near genes chr3L_14_90001 chr3L_90001 RAL-373_125b 1464 chr3L 105954 106026 chr3L 106133 106205 17 176 7.0 7.0 7.0 2.1 251 chr3L 105954 intergenic not near genes chr3L 106080 intergenic not near genes chr3L 106205 intergenic not near genes chr3L_17_105001 chr3L_105001 RAL-373_125b 1465 chr3L 107309 107363 chr3L 107436 107501 15 136 5.0 6.0 5.5 2.3 192 chr3L 107309 intergenic not near genes chr3L 107405 intergenic not near genes chr3L 107501 intergenic not near genes chr3L_15_105001 chr3L_105001 RAL-373_125b 1466 chr3L 108561 108626 chr3L 108754 108806 14 192 2.5 3.5 3.0 3.5 245 chr3L 108561 intergenic not near genes chr3L 108684 intergenic not near genes chr3L 108806 intergenic not near genes chr3L_14_105001 chr3L_105001 RAL-373_125b 1467 chr3L 110170 110226 chr3L 119387 119443 roo 19 9214 8.0 9.0 8.5 2.0 9273 chr3L 110170 intergenic not near genes chr3L 114806 intergenic not near genes chr3L 119443 intergenic not near genes chr3L_19_110001 chr3L_110001 RAL-373_125b 1468 chr3L 217317 217387 chr3L 217689 217765 33 371 5.0 9.5 7.2 4.0 448 chr3L 217317 5` UTR Kaz1-ORFB + chr3L 217541 exon Kaz1-ORFB + chr3L 217765 exon Kaz1-ORFB + chr3L_33_215001 chr3L_215001 RAL-373_125b 1469 chr3L 228137 228173 chr3L 228268 228296 13 126 10.0 8.5 9.2 1.3 159 chr3L 228137 5` UTR CR42862 + chr3L 228216 5` UTR CR42862 + chr3L 228296 5` UTR CR42862 + chr3L_13_225001 chr3L_225001 RAL-373_125b 1470 chr3L 228177 228203 chr3L 228266 228323 7 119 5.0 8.0 6.5 0.9 146 chr3L 228177 5` UTR CR42862 + chr3L 228250 5` UTR CR42862 + chr3L 228323 5` UTR CR42862 + chr3L_7_225001 chr3L_225001 RAL-373_125b 1471 chr3L 291905 291973 chr3L 292101 292169 14 195 3.5 5.5 4.5 2.5 264 chr3L 291905 intron RhoGEF3 + chr3L 292037 intron RhoGEF3 + chr3L 292169 intron RhoGEF3 + chr3L_14_290001 chr3L_290001 RAL-373_125b 1472 chr3L 321196 321265 chr3L 321334 321352 14 129 6.0 0.0 3.0 3.5 156 chr3L 321196 intergenic CG32344 - chr3L 321274 3` UTR CG32344 - chr3L 321352 3` UTR CG32344 - chr3L_14_320001 chr3L_320001 RAL-373_125b 1473 chr3L 343148 343177 chr3L 343320 343334 9 169 11.5 11.0 11.2 0.7 186 chr3L 343148 intron Ptpmeg + chr3L 343241 intron Ptpmeg + chr3L 343334 intron Ptpmeg + chr3L_9_340001 chr3L_340001 RAL-373_125b 1474 chr3L 402668 402708 chr3L 409741 409809 297 16 7095 6.5 8.5 7.5 1.9 7141 chr3L 402668 intergenic not near genes chr3L 406238 intergenic not near genes chr3L 409809 intergenic not near genes chr3L_16_405001 chr3L_405001 RAL-373_125b 1475 chr3L 456157 456234 chr3L 456287 456338 15 123 5.5 7.0 6.2 2.1 181 chr3L 456157 intron klar - chr3L 456248 intron klar - chr3L 456338 intron klar - chr3L_15_455001 chr3L_455001 RAL-373_125b 1476 chr3L 563930 563955 chr3L 564154 564173 8 223 11.5 5.5 8.5 0.8 243 chr3L 563930 intron hipk + chr3L 564052 intron hipk + chr3L 564173 intron hipk + chr3L_8_560001 chr3L_560001 RAL-373_125b 1477 chr3L 563956 563994 chr3L 564149 564223 13 220 5.5 5.0 5.2 2.1 267 chr3L 563956 intron hipk + chr3L 564090 intron hipk + chr3L 564223 intron hipk + chr3L_13_560001 chr3L_560001 RAL-373_125b 1478 chr3L 603008 603025 chr3L 603141 603158 6 133 10.0 0.0 5.0 1.0 150 chr3L 603008 intron CG13893 - chr3L 603083 intron CG13893 - chr3L 603158 intron CG13893 - chr3L_6_600001 chr3L_600001 RAL-373_125b 1479 chr3L 606872 606907 chr3L 607001 607031 4 127 0.0 7.5 3.8 0.8 159 chr3L 606872 intergenic Reg-2 - chr3L 606952 intergenic Reg-2 - chr3L 607031 intergenic Reg-2 - chr3L_4_605001 chr3L_605001 RAL-373_125b 1480 chr3L 673775 673840 chr3L 673909 673974 13 133 6.5 7.5 7.0 1.6 199 chr3L 673775 intergenic not near genes chr3L 673874 intergenic not near genes chr3L 673974 intergenic not near genes chr3L_13_670001 chr3L_670001 RAL-373_125b 1481 chr3L 698370 698394 chr3L 698506 698525 4 134 40.0 38.5 39.2 0.1 155 chr3L 698370 intron CG13894 - chr3L 698448 intron CG13894 - chr3L 698525 intron CG13894 - chr3L_4_695001 chr3L_695001 RAL-373_125b 1482 chr3L 732777 732846 chr3L 733049 733071 22 265 3.5 5.0 4.2 4.2 294 chr3L 732777 intergenic not near genes chr3L 732924 intergenic not near genes chr3L 733071 intergenic not near genes chr3L_22_730001 chr3L_730001 RAL-373_125b 1483 chr3L 771761 771780 chr3L 772062 772063 5 296 15.0 5.0 10.0 0.5 302 chr3L 771761 intergenic not near genes chr3L 771912 intergenic not near genes chr3L 772063 intergenic not near genes chr3L_5_770001 chr3L_770001 RAL-373_125b 1484 chr3L 789873 789934 chr3L 790403 790469 roo 13 532 5.5 6.5 6.0 1.9 596 chr3L 789873 intergenic not near genes chr3L 790171 intergenic not near genes chr3L 790469 intergenic not near genes chr3L_13_790001 chr3L_790001 RAL-373_125b 1485 chr3L 819291 819326 chr3L 819403 819427 6 110 6.0 0.5 3.2 1.4 136 chr3L 819291 intergenic not near genes chr3L 819359 intergenic not near genes chr3L 819427 intergenic not near genes chr3L_6_815001 chr3L_815001 RAL-373_125b 1486 chr3L 823991 824044 chr3L 824123 824171 5 128 5.0 0.0 2.5 1.4 180 chr3L 823991 intergenic not near genes chr3L 824081 intergenic not near genes chr3L 824171 intergenic not near genes chr3L_5_820001 chr3L_820001 RAL-373_125b 1487 chr3L 832574 832610 chr3L 832689 832725 8 122 9.5 6.5 8.0 0.9 151 chr3L 832574 intron,3` UTR CG13900 -,snoRNA:Psi28S-3308 - chr3L 832650 intron CG13900 - chr3L 832725 exon CG13900 - chr3L_8_830001 chr3L_830001 RAL-373_125b 1488 chr3L 832614 832620 chr3L 832682 832750 4 114 7.0 7.0 7.0 0.5 136 chr3L 832614 intron,3` UTR CG13900 -,snoRNA:Psi28S-3308 - chr3L 832682 intron CG13900 - chr3L 832750 exon CG13900 - chr3L_4_830001 chr3L_830001 RAL-373_125b 1489 chr3L 857961 858024 chr3L 866487 866554 Tirant 6 8528 4.5 4.0 4.2 1.2 8593 chr3L 857961 intergenic not near genes chr3L 862258 intergenic not near genes chr3L 866554 5` UTR CG12502 + chr3L_6_860001 chr3L_860001 RAL-373_125b 1490 chr3L 901378 901422 chr3L 901511 901525 8 125 10.5 7.5 9.0 0.8 147 chr3L 901378 intergenic not near genes chr3L 901452 intergenic not near genes chr3L 901525 intergenic not near genes chr3L_8_900001 chr3L_900001 RAL-373_125b 1491 chr3L 901425 901444 chr3L 901509 901543 11 109 4.5 6.5 5.5 1.7 118 chr3L 901425 intergenic not near genes chr3L 901484 intergenic not near genes chr3L 901543 intergenic not near genes chr3L_11_900001 chr3L_900001 RAL-373_125b 1492 chr3L 918382 918454 chr3L 918517 918585 12 132 3.5 3.0 3.2 2.9 203 chr3L 918382 intron Glut1 + chr3L 918484 intron Glut1 + chr3L 918585 intron Glut1 + chr3L_12_915001 chr3L_915001 RAL-373_125b 1493 chr3L 922124 922184 chr3L 922251 922291 12 121 6.5 5.0 5.8 1.8 167 chr3L 922124 intron Glut1 + chr3L 922208 intron Glut1 + chr3L 922291 intron Glut1 + chr3L_12_920001 chr3L_920001 RAL-373_125b 1494 chr3L 925135 925139 chr3L 932611 932615 mdg1 5 7476 12.5 5.0 8.8 0.5 7480 chr3L 925135 intron Glut1 + chr3L 928875 intron Glut1 + chr3L 932615 intron Glut1 + chr3L_5_925001 chr3L_925001 RAL-373_125b 1495 chr3L 925141 925195 chr3L 932607 932671 mdg1 15 7473 3.0 5.0 4.0 3.0 7530 chr3L 925141 intron Glut1 + chr3L 928906 intron Glut1 + chr3L 932671 intron Glut1 + chr3L_15_925001 chr3L_925001 RAL-373_125b 1496 chr3L 933859 933942 chr3L 934013 934080 17 148 4.0 4.5 4.2 3.3 221 chr3L 933859 intron Glut1 + chr3L 933970 intron Glut1 + chr3L 934080 intron Glut1 + chr3L_17_930001 chr3L_930001 RAL-373_125b 1497 chr3L 939733 939783 chr3L 940904 940952 jockey 20 1168 10.5 8.5 9.5 1.9 1219 chr3L 939733 intron Glut1 + chr3L 940342 intron Glut1 + chr3L 940952 intron Glut1 + chr3L_20_940001 chr3L_940001 RAL-373_125b 1498 chr3L 1021805 1021813 chr3L 1021922 1021945 5 126 4.5 1.0 2.8 1.3 140 chr3L 1021805 intron trio - chr3L 1021875 intron trio - chr3L 1021945 intron trio - chr3L_5_1020001 chr3L_1020001 RAL-373_125b 1499 chr3L 1031552 1031588 chr3L 1031660 1031699 7 117 6.5 5.5 6.0 1.0 147 chr3L 1031552 intron trio - chr3L 1031626 intron trio - chr3L 1031699 intron trio - chr3L_7_1030001 chr3L_1030001 RAL-373_125b 1500 chr3L 1042919 1042987 chr3L 1043047 1043115 21 127 2.5 3.5 3.0 5.2 196 chr3L 1042919 intron bab1 - chr3L 1043017 intron bab1 - chr3L 1043115 intron bab1 - chr3L_21_1040001 chr3L_1040001 RAL-373_125b 1501 chr3L 1047331 1047384 chr3L 1055194 1055208 412 7 7851 3.0 6.5 4.8 1.2 7877 chr3L 1047331 intron bab1 - chr3L 1051270 intron bab1 - chr3L 1055208 intron bab1 - chr3L_7_1050001 chr3L_1050001 RAL-373_125b 1502 chr3L 1095002 1095044 chr3L 1095115 1095170 13 120 6.0 6.0 6.0 1.9 168 chr3L 1095002 intron bab1 - chr3L 1095086 intron bab1 - chr3L 1095170 intron bab1 - chr3L_13_1095001 chr3L_1095001 RAL-373_125b 1503 chr3L 1145194 1145248 chr3L 1145323 1145372 9 128 6.0 0.0 3.0 2.2 178 chr3L 1145194 intron bab2 - chr3L 1145283 intron bab2 - chr3L 1145372 intron bab2 - chr3L_9_1145001 chr3L_1145001 RAL-373_125b 1504 chr3L 1154082 1154155 chr3L 1163282 1163350 roo 18 9198 6.0 1.0 3.5 4.0 9268 chr3L 1154082 intron bab2 - chr3L 1158716 intron bab2 - chr3L 1163350 intron bab2 - chr3L_18_1155001 chr3L_1155001 RAL-373_125b 1505 chr3L 1219552 1219621 chr3L 1227329 1227384 412 16 7770 7.0 3.0 5.0 2.7 7832 chr3L 1219552 intron mwh + chr3L 1223468 intron mwh + chr3L 1227384 intron mwh + chr3L_16_1220001 chr3L_1220001 RAL-373_125b 1506 chr3L 1236189 1236228 chr3L 1236314 1236325 11 119 0.5 0.0 0.2 9.2 136 chr3L 1236189 intron CG9194 + chr3L 1236257 intron CG9194 + chr3L 1236325 intron CG9194 + chr3L_11_1235001 chr3L_1235001 RAL-373_125b 1507 chr3L 1260111 1260163 chr3L 1260238 1260293 17 126 6.0 6.5 6.2 2.4 182 chr3L 1260111 intron CG9134 + chr3L 1260202 intron CG9134 + chr3L 1260293 intron CG9134 + chr3L_17_1260001 chr3L_1260001 RAL-373_125b 1508 chr3L 1358240 1358291 chr3L 1358744 1358797 15 509 0.5 6.0 3.2 3.6 557 chr3L 1358240 intron Ptp61F - chr3L 1358518 intron Ptp61F - chr3L 1358797 intron Ptp61F - chr3L_15_1355001 chr3L_1355001 RAL-373_125b 1509 chr3L 1396689 1396756 chr3L 1396823 1396888 13 130 4.5 5.5 5.0 2.2 199 chr3L 1396689 intron Ptp61F - chr3L 1396788 intron Ptp61F - chr3L 1396888 intron Ptp61F - chr3L_13_1395001 chr3L_1395001 RAL-373_125b 1510 chr3L 1415727 1415756 chr3L 1415863 1415877 4 126 5.0 7.0 6.0 0.6 150 chr3L 1415727 intron Ptp61F - chr3L 1415802 intron Ptp61F - chr3L 1415877 intron Ptp61F - chr3L_4_1415001 chr3L_1415001 RAL-373_125b 1511 chr3L 1415762 1415801 chr3L 1415859 1415906 14 116 4.0 7.0 5.5 2.2 144 chr3L 1415762 intron Ptp61F - chr3L 1415834 intron Ptp61F - chr3L 1415906 intron Ptp61F - chr3L_14_1415001 chr3L_1415001 RAL-373_125b 1512 chr3L 1424763 1424773 chr3L 1430036 1430057 Rt1a 6 5286 2.0 6.0 4.0 1.2 5294 chr3L 1424763 intron Ptp61F - chr3L 1427410 intron Ptp61F - chr3L 1430057 intron Ptp61F - chr3L_6_1425001 chr3L_1425001 RAL-373_125b 1513 chr3L 1454194 1454261 chr3L 1454321 1454388 23 124 7.0 8.5 7.8 2.6 194 chr3L 1454194 intron Ptp61F - chr3L 1454291 intron Ptp61F - chr3L 1454388 intron Ptp61F - chr3L_23_1450001 chr3L_1450001 RAL-373_125b 1514 chr3L 1485691 1485740 chr3L 1486909 1486938 1360 19 1214 9.0 10.5 9.8 1.8 1247 chr3L 1485691 intron stet - chr3L 1486314 intron stet - chr3L 1486938 intron stet - chr3L_19_1485001 chr3L_1485001 RAL-373_125b 1515 chr3L 1501961 1502014 chr3L 1502081 1502134 22 122 0.5 4.5 2.5 6.3 173 chr3L 1501961 intron pUf68 - chr3L 1502048 intron pUf68 - chr3L 1502134 intron pUf68 - chr3L_22_1500001 chr3L_1500001 RAL-373_125b 1516 chr3L 1688266 1688341 chr3L 1688395 1688467 24 127 7.0 1.5 4.2 4.6 201 chr3L 1688266 intron CG7991 + chr3L 1688366 intron CG7991 + chr3L 1688467 intron CG7991 + chr3L_24_1685001 chr3L_1685001 RAL-373_125b 1517 chr3L 1740816 1740824 chr3L 1741109 1741117 pogo 5 293 15.5 7.5 11.5 0.4 301 chr3L 1740816 intron Gk + chr3L 1740966 intron Gk + chr3L 1741117 intron Gk + chr3L_5_1740001 chr3L_1740001 RAL-373_125b 1518 chr3L 1740825 1740880 chr3L 1741107 1741163 pogo 7 283 7.5 7.0 7.2 0.9 338 chr3L 1740825 intron Gk + chr3L 1740994 intron Gk + chr3L 1741163 intron Gk + chr3L_7_1740001 chr3L_1740001 RAL-373_125b 1519 chr3L 1775364 1775381 chr3L 1775496 1775510 5 131 2.0 0.0 1.0 2.5 146 chr3L 1775364 intergenic CG13933 -,CR44351 +,CG12018 + chr3L 1775437 intergenic CG12018 +,CG13933 -,CR44351 + chr3L 1775510 intergenic CG12018 +,CG13933 -,CR44351 + chr3L_5_1775001 chr3L_1775001 RAL-373_125b 1520 chr3L 1853001 1853042 chr3L 1853135 1853176 15 133 5.0 4.0 4.5 2.7 175 chr3L 1853001 intron CG13936 - chr3L 1853088 intron CG13936 - chr3L 1853176 intron CG13936 - chr3L_15_1850001 chr3L_1850001 RAL-373_125b 1521 chr3L 1892956 1893028 chr3L 1893145 1893219 14 187 4.5 2.5 3.5 3.1 263 chr3L 1892956 intergenic CG1887 - chr3L 1893088 intergenic CG1887 - chr3L 1893219 intergenic CG1887 - chr3L_14_1890001 chr3L_1890001 RAL-373_125b 1522 chr3L 1905323 1905374 chr3L 1905467 1905518 8 141 5.0 9.5 7.2 1.0 195 chr3L 1905323 intron CG1887 - chr3L 1905420 intron CG1887 - chr3L 1905518 intron CG1887 - chr3L_8_1905001 chr3L_1905001 RAL-373_125b 1523 chr3L 1922413 1922462 chr3L 1922539 1922576 10 120 12.5 11.5 12.0 0.8 163 chr3L 1922413 intron Dbx + chr3L 1922494 intron Dbx + chr3L 1922576 intron Dbx + chr3L_10_1920001 chr3L_1920001 RAL-373_125b 1524 chr3L 1922968 1923027 chr3L 1923103 1923156 21 133 1.5 4.5 3.0 5.2 188 chr3L 1922968 intron Dbx + chr3L 1923062 intron Dbx + chr3L 1923156 intron Dbx + chr3L_21_1920001 chr3L_1920001 RAL-373_125b 1525 chr3L 1924914 1924976 chr3L 1925102 1925164 13 182 5.5 4.0 4.8 2.2 250 chr3L 1924914 exon Dbx + chr3L 1925039 intron Dbx + chr3L 1925164 intron Dbx + chr3L_13_1925001 chr3L_1925001 RAL-373_125b 1526 chr3L 1988827 1988863 chr3L 1989041 1989087 10 221 1.0 6.0 3.5 2.2 260 chr3L 1988827 intergenic not near genes chr3L 1988957 intergenic not near genes chr3L 1989087 intergenic not near genes chr3L_10_1985001 chr3L_1985001 RAL-373_125b 1527 chr3L 1991079 1991141 chr3L 1991197 1991239 15 121 6.0 1.0 3.5 3.3 160 chr3L 1991079 intergenic not near genes chr3L 1991159 intergenic not near genes chr3L 1991239 intergenic not near genes chr3L_15_1990001 chr3L_1990001 RAL-373_125b 1528 chr3L 2016028 2016100 chr3L 2016214 2016231 9 174 2.5 1.5 2.0 3.0 203 chr3L 2016028 intergenic not near genes chr3L 2016130 intergenic not near genes chr3L 2016231 intergenic not near genes chr3L_9_2015001 chr3L_2015001 RAL-373_125b 1529 chr3L 2024166 2024225 chr3L 2024301 2024360 9 132 4.0 3.0 3.5 2.0 194 chr3L 2024166 intergenic not near genes chr3L 2024263 intergenic not near genes chr3L 2024360 intergenic not near genes chr3L_9_2020001 chr3L_2020001 RAL-373_125b 1530 chr3L 2108199 2108245 chr3L 2113453 2113499 copia 10 5252 0.0 4.5 2.2 3.1 5300 chr3L 2108199 intron sls - chr3L 2110849 intron sls - chr3L 2113499 intron sls - chr3L_10_2110001 chr3L_2110001 RAL-373_125b 1531 chr3L 2139159 2139222 chr3L 2139290 2139348 12 127 8.5 0.0 4.2 2.3 189 chr3L 2139159 intron zormin - chr3L 2139254 intron zormin - chr3L 2139348 intron zormin - chr3L_12_2135001 chr3L_2135001 RAL-373_125b 1532 chr3L 2163924 2164064 chr3L 2164066 2164251 9 203 0.5 0.5 0.5 6.0 327 chr3L 2163924 intergenic CG15822 - chr3L 2164088 intergenic CG15822 - chr3L 2164251 intergenic CG15822 - chr3L_9_2160001 chr3L_2160001 RAL-373_125b 1533 chr3L 2168739 2168800 chr3L 2168869 2168941 17 139 5.5 3.0 4.2 3.3 202 chr3L 2168739 exon CG15879 - chr3L 2168840 intron CG15879 - chr3L 2168941 intron CG15879 - chr3L_17_2165001 chr3L_2165001 RAL-373_125b 1534 chr3L 2199789 2199817 chr3L 2199899 2199937 7 120 3.0 9.5 6.2 1.0 148 chr3L 2199789 intergenic not near genes chr3L 2199863 intergenic not near genes chr3L 2199937 intergenic not near genes chr3L_7_2195001 chr3L_2195001 RAL-373_125b 1535 chr3L 2321123 2321145 chr3L 2321250 2321264 5 125 9.5 7.0 8.2 0.5 141 chr3L 2321123 intergenic not near genes chr3L 2321194 intergenic not near genes chr3L 2321264 intergenic not near genes chr3L_5_2320001 chr3L_2320001 RAL-373_125b 1536 chr3L 2321146 2321188 chr3L 2321248 2321310 10 120 5.0 6.5 5.8 1.5 164 chr3L 2321146 intergenic not near genes chr3L 2321228 intergenic not near genes chr3L 2321310 intergenic not near genes chr3L_10_2320001 chr3L_2320001 RAL-373_125b 1537 chr3L 2331541 2331615 chr3L 2331668 2331672 22 119 7.0 5.0 6.0 3.1 131 chr3L 2331541 intron MsR1 + chr3L 2331606 intron MsR1 + chr3L 2331672 intron MsR1 + chr3L_22_2330001 chr3L_2330001 RAL-373_125b 1538 chr3L 2392662 2392730 chr3L 2392806 2392873 14 136 3.5 8.0 5.8 2.1 211 chr3L 2392662 intron CG45186 + chr3L 2392768 intron CG45186 + chr3L 2392873 intron CG45186 + chr3L_14_2390001 chr3L_2390001 RAL-373_125b 1539 chr3L 2411316 2411339 chr3L 2411420 2411469 4 124 1.0 3.5 2.2 1.2 153 chr3L 2411316 intron CG45186 + chr3L 2411392 intron CG45186 + chr3L 2411469 intron CG45186 + chr3L_4_2410001 chr3L_2410001 RAL-373_125b 1540 chr3L 2447484 2447530 chr3L 2456675 2456731 roo 7 9196 4.0 6.0 5.0 1.2 9247 chr3L 2447484 intron CG45186 + chr3L 2452108 intron CG45186 + chr3L 2456731 intron CG45186 + chr3L_7_2450001 chr3L_2450001 RAL-373_125b 1541 chr3L 2467446 2467467 chr3L 2467593 2467614 6 146 5.0 10.0 7.5 0.7 168 chr3L 2467446 intron CG45186 + chr3L 2467530 intron CG45186 + chr3L 2467614 intron CG45186 + chr3L_6_2465001 chr3L_2465001 RAL-373_125b 1542 chr3L 2483112 2483161 chr3L 2483236 2483283 6 121 4.5 6.0 5.2 1.0 171 chr3L 2483112 intron CG45186 + chr3L 2483198 intron CG45186 + chr3L 2483283 intron CG45186 + chr3L_6_2480001 chr3L_2480001 RAL-373_125b 1543 chr3L 2493782 2493849 chr3L 2493900 2493987 15 134 7.0 0.0 3.5 3.3 205 chr3L 2493782 intron CG45186 + chr3L 2493884 intron CG45186 + chr3L 2493987 intron CG45186 + chr3L_15_2490001 chr3L_2490001 RAL-373_125b 1544 chr3L 2515353 2515428 chr3L 2515485 2515559 22 130 4.5 4.0 4.2 4.2 206 chr3L 2515353 intron Spn - chr3L 2515456 intron Spn - chr3L 2515559 intron Spn - chr3L_22_2515001 chr3L_2515001 RAL-373_125b 1545 chr3L 2533641 2533667 chr3L 2533742 2533781 6 117 9.0 10.5 9.8 0.6 140 chr3L 2533641 intron Spn - chr3L 2533711 intron Spn - chr3L 2533781 intron Spn - chr3L_6_2530001 chr3L_2530001 RAL-373_125b 1546 chr3L 2533669 2533673 chr3L 2533741 2533794 4 101 7.0 10.5 8.8 0.4 125 chr3L 2533669 intron Spn - chr3L 2533732 intron Spn - chr3L 2533794 intron Spn - chr3L_4_2530001 chr3L_2530001 RAL-373_125b 1547 chr3L 2546787 2546794 chr3L 2546921 2546933 5 138 5.0 10.5 7.8 0.6 146 chr3L 2546787 intron Spn - chr3L 2546860 intron Spn - chr3L 2546933 intron Spn - chr3L_5_2545001 chr3L_2545001 RAL-373_125b 1548 chr3L 2561484 2561558 chr3L 2561611 2561674 20 125 5.5 7.0 6.2 2.8 190 chr3L 2561484 intron msn - chr3L 2561579 intron msn - chr3L 2561674 intron msn - chr3L_20_2560001 chr3L_2560001 RAL-373_125b 1549 chr3L 2581849 2581903 chr3L 2581993 2582047 10 138 6.5 5.5 6.0 1.4 198 chr3L 2581849 intron msn - chr3L 2581948 intron msn - chr3L 2582047 intron msn - chr3L_10_2580001 chr3L_2580001 RAL-373_125b 1550 chr3L 2683900 2683975 chr3L 2684026 2684101 14 124 7.0 6.5 6.8 1.8 201 chr3L 2683900 intron Fife - chr3L 2684000 intron Fife - chr3L 2684101 intron Fife - chr3L_14_2680001 chr3L_2680001 RAL-373_125b 1551 chr3L 2719493 2719556 chr3L 2719645 2719708 15 151 6.5 4.5 5.5 2.3 215 chr3L 2719493 3` UTR Mrtf - chr3L 2719600 3` UTR Mrtf - chr3L 2719708 3` UTR Mrtf - chr3L_15_2715001 chr3L_2715001 RAL-373_125b 1552 chr3L 2751423 2751457 chr3L 2755768 2755797 F-element 10 4342 10.0 13.0 11.5 0.8 4374 chr3L 2751423 intron Mrtf - chr3L 2753610 intron Mrtf - chr3L 2755797 intron Mrtf - chr3L_10_2750001 chr3L_2750001 RAL-373_125b 1553 chr3L 2795675 2795747 chr3L 2795848 2795920 13 171 5.5 3.0 4.2 2.5 245 chr3L 2795675 intron CG43444 - chr3L 2795798 intron CG43444 - chr3L 2795920 intron CG43444 - chr3L_13_2795001 chr3L_2795001 RAL-373_125b 1554 chr3L 2856248 2856307 chr3L 2856384 2856438 5 133 4.0 0.0 2.0 1.7 190 chr3L 2856248 intron CG43444 - chr3L 2856343 intron CG43444 - chr3L 2856438 intron CG43444 - chr3L_5_2855001 chr3L_2855001 RAL-373_125b 1555 chr3L 2863761 2863825 chr3L 2863891 2863955 10 130 0.0 0.5 0.2 8.3 194 chr3L 2863761 intron CG43444 - chr3L 2863858 intron CG43444 - chr3L 2863955 intron CG43444 - chr3L_10_2860001 chr3L_2860001 RAL-373_125b 1556 chr3L 2927791 2927859 chr3L 2936118 2936185 Tirant 14 8324 6.5 2.5 4.5 2.5 8394 chr3L 2927791 intron Shab + chr3L 2931988 intron Shab + chr3L 2936185 intron Shab + chr3L_14_2930001 chr3L_2930001 RAL-373_125b 1557 chr3L 2987688 2987697 chr3L 2987797 2987829 4 123 8.5 0.0 4.2 0.8 141 chr3L 2987688 intergenic not near genes chr3L 2987758 intergenic not near genes chr3L 2987829 intergenic not near genes chr3L_4_2985001 chr3L_2985001 RAL-373_125b 1558 chr3L 3040279 3040333 chr3L 3042118 3042172 S-element 7 1836 8.5 3.0 5.8 1.0 1893 chr3L 3040279 3` UTR CG2162 + chr3L 3041226 intergenic not near genes chr3L 3042172 intergenic Jafrac2 + chr3L_7_3040001 chr3L_3040001 RAL-373_125b 1559 chr3L 3051711 3051751 chr3L 3051993 3052033 pogo 9 291 8.0 6.0 7.0 1.1 322 chr3L 3051711 3` UTR CG32485 + chr3L 3051872 intergenic CG32485 + chr3L 3052033 intergenic CG32485 +,CG1271 + chr3L_9_3050001 chr3L_3050001 RAL-373_125b 1560 chr3L 3061262 3061312 chr3L 3069870 3069926 Tirant 14 8614 5.5 8.5 7.0 1.8 8664 chr3L 3061262 intron CG32486 - chr3L 3065594 intron CG32486 - chr3L 3069926 intron CG32486 - chr3L_14_3065001 chr3L_3065001 RAL-373_125b 1561 chr3L 3128160 3128215 chr3L 3128285 3128351 12 134 8.5 5.0 6.8 1.5 191 chr3L 3128160 intergenic prominin-like - chr3L 3128256 intergenic not near genes chr3L 3128351 intergenic CG11537 - chr3L_12_3125001 chr3L_3125001 RAL-373_125b 1562 chr3L 3259583 3259590 chr3L 3259728 3259735 5 144 8.5 4.0 6.2 0.7 152 chr3L 3259583 intron ckd + chr3L 3259659 intron ckd + chr3L 3259735 intron ckd + chr3L_5_3255001 chr3L_3255001 RAL-373_125b 1563 chr3L 3259592 3259641 chr3L 3259724 3259786 16 136 4.5 4.0 4.2 3.1 194 chr3L 3259592 intron ckd + chr3L 3259689 intron ckd + chr3L 3259786 intron ckd + chr3L_16_3255001 chr3L_3255001 RAL-373_125b 1564 chr3L 3262247 3262294 chr3L 3262373 3262415 10 126 7.0 4.0 5.5 1.5 168 chr3L 3262247 intron ckd + chr3L 3262331 intron ckd + chr3L 3262415 intron ckd + chr3L_10_3260001 chr3L_3260001 RAL-373_125b 1565 chr3L 3281416 3281460 chr3L 3281940 3282005 Doc 20 525 5.5 9.0 7.2 2.4 589 chr3L 3281416 intron CG12017 + chr3L 3281710 intron CG12017 + chr3L 3282005 intron CG12017 + chr3L_20_3280001 chr3L_3280001 RAL-373_125b 1566 chr3L 3306481 3306537 chr3L 3306613 3306669 16 137 7.0 5.0 6.0 2.3 188 chr3L 3306481 intron ZnT63C + chr3L 3306575 intron ZnT63C + chr3L 3306669 intron ZnT63C + chr3L_16_3305001 chr3L_3305001 RAL-373_125b 1567 chr3L 3436243 3436315 chr3L 3436368 3436444 16 128 4.0 7.0 5.5 2.5 201 chr3L 3436243 intron eIF5B - chr3L 3436344 intron eIF5B - chr3L 3436444 intron eIF5B - chr3L_16_3435001 chr3L_3435001 RAL-373_125b 1568 chr3L 3445560 3445620 chr3L 3445733 3445801 13 173 4.5 4.5 4.5 2.4 241 chr3L 3445560 exon eIF5B - chr3L 3445680 intron eIF5B - chr3L 3445801 intron eIF5B - chr3L_13_3445001 chr3L_3445001 RAL-373_125b 1569 chr3L 3470123 3470181 chr3L 3470249 3470307 15 125 0.0 7.5 3.8 3.1 184 chr3L 3470123 intron CG14971 - chr3L 3470215 intron CG14971 - chr3L 3470307 intron CG14971 - chr3L_15_3470001 chr3L_3470001 RAL-373_125b 1570 chr3L 3475027 3475100 chr3L 3475522 3475523 jockey 10 484 2.5 4.0 3.2 2.4 496 chr3L 3475027 intron CG42324 + chr3L 3475275 intron CG42324 + chr3L 3475523 intron CG42324 + chr3L_10_3475001 chr3L_3475001 RAL-373_125b 1571 chr3L 3494149 3494152 chr3L 3494276 3494279 4 127 0.5 4.0 2.2 1.2 130 chr3L 3494149 intron CG42324 + chr3L 3494214 intron CG42324 + chr3L 3494279 intron CG42324 + chr3L_4_3490001 chr3L_3490001 RAL-373_125b 1572 chr3L 3494157 3494197 chr3L 3494275 3494310 11 123 0.5 4.0 2.2 3.4 153 chr3L 3494157 intron CG42324 + chr3L 3494234 intron CG42324 + chr3L 3494310 intron CG42324 + chr3L_11_3490001 chr3L_3490001 RAL-373_125b 1573 chr3L 3544368 3544406 chr3L 3544503 3544566 5 148 0.0 4.0 2.0 1.7 198 chr3L 3544368 intron Eip63E + chr3L 3544467 intron Eip63E + chr3L 3544566 intron Eip63E + chr3L_5_3540001 chr3L_3540001 RAL-373_125b 1574 chr3L 3573122 3573191 chr3L 3573252 3573324 27 129 7.0 4.0 5.5 4.2 202 chr3L 3573122 intron Eip63E + chr3L 3573223 intron Eip63E + chr3L 3573324 intron Eip63E + chr3L_27_3570001 chr3L_3570001 RAL-373_125b 1575 chr3L 3581015 3581037 chr3L 3581129 3581175 4 131 1.5 11.0 6.2 0.6 160 chr3L 3581015 intron Eip63E + chr3L 3581095 intron Eip63E + chr3L 3581175 intron Eip63E + chr3L_4_3580001 chr3L_3580001 RAL-373_125b 1576 chr3L 3601263 3601272 chr3L 3606624 3606633 copia 7 5361 6.5 6.5 6.5 0.9 5370 chr3L 3601263 intron Eip63E + chr3L 3603948 intron Eip63E + chr3L 3606633 intron Eip63E + chr3L_7_3600001 chr3L_3600001 RAL-373_125b 1577 chr3L 3601273 3601285 chr3L 3606623 3606646 copia 5 5355 6.5 5.0 5.8 0.7 5373 chr3L 3601273 intron Eip63E + chr3L 3603960 intron Eip63E + chr3L 3606646 intron Eip63E + chr3L_5_3600001 chr3L_3600001 RAL-373_125b 1578 chr3L 3601286 3601328 chr3L 3606622 3606688 copia 12 5353 4.0 5.0 4.5 2.2 5402 chr3L 3601286 intron Eip63E + chr3L 3603987 intron Eip63E + chr3L 3606688 intron Eip63E + chr3L_12_3600001 chr3L_3600001 RAL-373_125b 1579 chr3L 3619365 3619424 chr3L 3619509 3619562 15 142 5.0 1.5 3.2 3.6 197 chr3L 3619365 intergenic not near genes chr3L 3619464 intergenic not near genes chr3L 3619562 intergenic not near genes chr3L_15_3615001 chr3L_3615001 RAL-373_125b 1580 chr3L 3627186 3627259 chr3L 3627341 3627414 20 154 2.5 2.5 2.5 5.7 228 chr3L 3627186 intron dar1 + chr3L 3627300 intron dar1 + chr3L 3627414 intron dar1 + chr3L_20_3625001 chr3L_3625001 RAL-373_125b 1581 chr3L 3766690 3766714 chr3L 3766826 3766850 6 136 7.5 0.0 3.8 1.2 160 chr3L 3766690 intron CG32264 - chr3L 3766770 intron CG32264 - chr3L 3766850 intron CG32264 - chr3L_6_3765001 chr3L_3765001 RAL-373_125b 1582 chr3L 3773613 3773671 chr3L 3773748 3773802 15 132 0.0 8.5 4.2 2.9 189 chr3L 3773613 intron CG32264 - chr3L 3773708 intron CG32264 - chr3L 3773802 intron CG32264 - chr3L_15_3770001 chr3L_3770001 RAL-373_125b 1583 chr3L 3783239 3783289 chr3L 3783359 3783412 7 122 3.0 2.5 2.8 1.8 173 chr3L 3783239 intron CG32264 - chr3L 3783326 intron CG32264 - chr3L 3783412 intron CG32264 - chr3L_7_3780001 chr3L_3780001 RAL-373_125b 1584 chr3L 3796356 3796391 chr3L 3796604 3796628 5 243 3.5 3.0 3.2 1.2 272 chr3L 3796356 intron CG32264 - chr3L 3796492 intron CG32264 - chr3L 3796628 intron CG32264 - chr3L_5_3795001 chr3L_3795001 RAL-373_125b 1585 chr3L 3797202 3797262 chr3L 3797322 3797395 8 126 0.5 3.0 1.8 2.9 193 chr3L 3797202 intron CG32264 - chr3L 3797298 intron CG32264 - chr3L 3797395 intron CG32264 - chr3L_8_3795001 chr3L_3795001 RAL-373_125b 1586 chr3L 3833692 3833758 chr3L 3833983 3834049 pogo 10 290 4.5 4.0 4.2 1.9 357 chr3L 3833692 intron enc + chr3L 3833870 intron enc + chr3L 3834049 intron enc + chr3L_10_3830001 chr3L_3830001 RAL-373_125b 1587 chr3L 3889085 3889136 chr3L 3889218 3889269 9 132 3.0 4.0 3.5 2.0 184 chr3L 3889085 intergenic not near genes chr3L 3889177 intergenic not near genes chr3L 3889269 intergenic not near genes chr3L_9_3885001 chr3L_3885001 RAL-373_125b 1588 chr3L 3912752 3912811 chr3L 3912894 3912953 10 138 2.5 0.0 1.2 4.5 201 chr3L 3912752 intron Eip63F-1 - chr3L 3912852 intron Eip63F-1 - chr3L 3912953 intron Eip63F-1 - chr3L_10_3910001 chr3L_3910001 RAL-373_125b 1589 chr3L 3940757 3940820 chr3L 3940893 3940967 9 140 4.0 0.0 2.0 3.0 210 chr3L 3940757 intron CR43916 + chr3L 3940862 intron CR43916 + chr3L 3940967 intron CR43916 + chr3L_9_3940001 chr3L_3940001 RAL-373_125b 1590 chr3L 4014221 4014274 chr3L 4014363 4014378 6 135 9.0 3.5 6.2 0.8 157 chr3L 4014221 intergenic not near genes chr3L 4014300 intergenic not near genes chr3L 4014378 intergenic not near genes chr3L_6_4010001 chr3L_4010001 RAL-373_125b 1591 chr3L 4146807 4146829 chr3L 4146939 4146961 7 132 0.0 12.0 6.0 1.0 154 chr3L 4146807 intergenic not near genes chr3L 4146884 intergenic not near genes chr3L 4146961 intergenic not near genes chr3L_7_4145001 chr3L_4145001 RAL-373_125b 1592 chr3L 4214495 4214546 chr3L 4214686 4214738 17 191 5.0 8.0 6.5 2.3 243 chr3L 4214495 intron CG43367 + chr3L 4214616 intron CG43367 + chr3L 4214738 intron CG43367 + chr3L_17_4210001 chr3L_4210001 RAL-373_125b 1593 chr3L 4299451 4299471 chr3L 4299553 4299583 8 105 12.5 12.5 12.5 0.6 132 chr3L 4299451 intron dyl - chr3L 4299517 intron dyl - chr3L 4299583 intron dyl - chr3L_8_4295001 chr3L_4295001 RAL-373_125b 1594 chr3L 4328692 4328758 chr3L 4336235 4336301 412 13 7546 2.5 3.5 3.0 3.2 7609 chr3L 4328692 intron Cip4 - chr3L 4332496 intron Cip4 - chr3L 4336301 exon Cip4 - chr3L_13_4330001 chr3L_4330001 RAL-373_125b 1595 chr3L 4341331 4341335 chr3L 21448026 21448026 7 17106694 29.0 28.0 28.5 0.2 17106695 chr3L 4341331 intron Cip4 - chr3L 12894678 3` UTR CG14118 + chr3L 21448026 3` UTR Syx7 + chr3L_7_12890001 chr3L_12890001 RAL-373_125b 1596 chr3L 4342365 4342437 chr3L 4342494 4342563 16 122 5.5 8.5 7.0 2.0 198 chr3L 4342365 intron Cip4 - chr3L 4342464 intron Cip4 - chr3L 4342563 intron Cip4 - chr3L_16_4340001 chr3L_4340001 RAL-373_125b 1597 chr3L 4347784 4347859 chr3L 4347920 4347985 24 130 5.0 7.0 6.0 3.4 201 chr3L 4347784 intron,5` UTR Cip4 -,CR45156 + chr3L 4347884 intron Cip4 - chr3L 4347985 intron Cip4 - chr3L_24_4345001 chr3L_4345001 RAL-373_125b 1598 chr3L 4397400 4397452 chr3L 4397572 4397619 15 168 6.0 5.0 5.5 2.3 219 chr3L 4397400 intron slow + chr3L 4397510 intron slow + chr3L 4397619 intron slow + chr3L_15_4395001 chr3L_4395001 RAL-373_125b 1599 chr3L 4408515 4408532 chr3L 4409098 4409118 6 587 5.5 6.0 5.8 0.9 603 chr3L 4408515 intron DOR + chr3L 4408816 intron DOR + chr3L 4409118 intron DOR + chr3L_6_4405001 chr3L_4405001 RAL-373_125b 1600 chr3L 4441808 4441860 chr3L 4441912 4441981 14 116 8.0 11.0 9.5 1.3 173 chr3L 4441808 intergenic not near genes chr3L 4441894 intergenic not near genes chr3L 4441981 intergenic not near genes chr3L_14_4440001 chr3L_4440001 RAL-373_125b 1601 chr3L 4446159 4446242 chr3L 4446295 4446368 7 131 2.0 5.0 3.5 1.6 209 chr3L 4446159 3` UTR CR45739 - chr3L 4446264 3` UTR CR45739 - chr3L 4446368 3` UTR CR45739 - chr3L_7_4445001 chr3L_4445001 RAL-373_125b 1602 chr3L 4503867 4503882 chr3L 4503994 4504009 11 126 5.5 0.0 2.8 2.9 142 chr3L 4503867 intron NT1 - chr3L 4503938 intron NT1 - chr3L 4504009 intron NT1 - chr3L_11_4500001 chr3L_4500001 RAL-373_125b 1603 chr3L 4580290 4580329 chr3L 4580409 4580445 16 119 6.5 6.0 6.2 2.2 155 chr3L 4580290 intron CG42540 + chr3L 4580368 intron CG42540 + chr3L 4580445 intron CG42540 + chr3L_16_4580001 chr3L_4580001 RAL-373_125b 1604 chr3L 4599463 4599535 chr3L 4599650 4599717 5 185 0.0 8.5 4.2 1.0 254 chr3L 4599463 intron Src64B - chr3L 4599590 intron Src64B - chr3L 4599717 intron Src64B - chr3L_5_4595001 chr3L_4595001 RAL-373_125b 1605 chr3L 4607215 4607287 chr3L 4607356 4607428 18 138 4.5 3.5 4.0 3.6 213 chr3L 4607215 intron Src64B - chr3L 4607322 intron Src64B - chr3L 4607428 intron Src64B - chr3L_18_4605001 chr3L_4605001 RAL-373_125b 1606 chr3L 4663956 4664024 chr3L 4664082 4664135 14 120 7.0 6.5 6.8 1.8 179 chr3L 4663956 intron axo - chr3L 4664046 intron axo - chr3L 4664135 exon axo - chr3L_14_4660001 chr3L_4660001 RAL-373_125b 1607 chr3L 4671001 4671045 chr3L 4671732 4671780 12 734 5.5 4.0 4.8 2.1 779 chr3L 4671001 intron axo - chr3L 4671390 intron axo - chr3L 4671780 intron axo - chr3L_12_4670001 chr3L_4670001 RAL-373_125b 1608 chr3L 4726397 4726459 chr3L 4726523 4726585 9 130 6.5 6.0 6.2 1.2 188 chr3L 4726397 intron RhoGEF64C + chr3L 4726491 intron RhoGEF64C + chr3L 4726585 intron RhoGEF64C + chr3L_9_4725001 chr3L_4725001 RAL-373_125b 1609 chr3L 4784935 4784990 chr3L 4785194 4785249 12 255 0.0 6.5 3.2 2.9 314 chr3L 4784935 intron RhoGEF64C + chr3L 4785092 intron RhoGEF64C + chr3L 4785249 intron RhoGEF64C + chr3L_12_4785001 chr3L_4785001 RAL-373_125b 1610 chr3L 4789452 4789476 chr3L 4789573 4789590 4 121 7.0 8.0 7.5 0.5 138 chr3L 4789452 exon RhoGEF64C + chr3L 4789521 exon RhoGEF64C + chr3L 4789590 exon RhoGEF64C + chr3L_4_4785001 chr3L_4785001 RAL-373_125b 1611 chr3L 4824800 4824862 chr3L 4824938 4825000 8 137 2.5 0.0 1.2 3.6 200 chr3L 4824800 intron Dhc64C - chr3L 4824900 intron Dhc64C - chr3L 4825000 intron Dhc64C - chr3L_8_4820001 chr3L_4820001 RAL-373_125b 1612 chr3L 4837853 4837915 chr3L 4837982 4838044 24 125 5.5 9.5 7.5 2.8 191 chr3L 4837853 3` UTR CG13707 - chr3L 4837948 3` UTR CG13707 - chr3L 4838044 3` UTR CG13707 - chr3L_24_4835001 chr3L_4835001 RAL-373_125b 1613 chr3L 4840351 4840409 chr3L 4840510 4840568 6 155 3.5 0.0 1.8 2.1 217 chr3L 4840351 intergenic CG13707 - chr3L 4840460 intergenic CG13707 - chr3L 4840568 intergenic CG13707 - chr3L_6_4840001 chr3L_4840001 RAL-373_125b 1614 chr3L 4844095 4844121 chr3L 4844228 4844254 8 132 6.0 4.5 5.2 1.3 159 chr3L 4844095 intergenic not near genes chr3L 4844174 intergenic not near genes chr3L 4844254 intergenic not near genes chr3L_8_4840001 chr3L_4840001 RAL-373_125b 1615 chr3L 4844122 4844142 chr3L 4844225 4844275 5 124 3.5 3.5 3.5 1.1 153 chr3L 4844122 intergenic not near genes chr3L 4844198 intergenic not near genes chr3L 4844275 intergenic not near genes chr3L_5_4840001 chr3L_4840001 RAL-373_125b 1616 chr3L 4846535 4846600 chr3L 4846676 4846746 10 137 7.0 6.5 6.8 1.3 211 chr3L 4846535 intergenic not near genes chr3L 4846640 intergenic not near genes chr3L 4846746 intergenic not near genes chr3L_10_4845001 chr3L_4845001 RAL-373_125b 1617 chr3L 4901079 4901153 chr3L 4907319 4907370 diver 12 6235 1.5 5.0 3.2 2.9 6291 chr3L 4901079 intergenic CG13704 + chr3L 4904224 intergenic not near genes chr3L 4907370 intergenic not near genes chr3L_12_4900001 chr3L_4900001 RAL-373_125b 1618 chr3L 4908876 4908933 chr3L 4909019 4909081 16 152 6.5 4.0 5.2 2.6 205 chr3L 4908876 intergenic not near genes chr3L 4908978 intergenic not near genes chr3L 4909081 intergenic not near genes chr3L_16_4905001 chr3L_4905001 RAL-373_125b 1619 chr3L 4943832 4943877 chr3L 4944034 4944094 5 210 3.0 4.5 3.8 1.0 262 chr3L 4943832 intron Con - chr3L 4943963 intron Con - chr3L 4944094 intron Con - chr3L_5_4940001 chr3L_4940001 RAL-373_125b 1620 chr3L 5034112 5034167 chr3L 5043314 5043369 roo 17 9198 6.0 1.5 3.8 3.5 9257 chr3L 5034112 intron Con - chr3L 5038740 intron Con - chr3L 5043369 intron Con - chr3L_17_5035001 chr3L_5035001 RAL-373_125b 1621 chr3L 5045411 5045471 chr3L 5050242 5050302 Doc 7 4829 4.0 3.0 3.5 1.6 4891 chr3L 5045411 5` UTR Con - chr3L 5047856 intron Con - chr3L 5050302 intron Con - chr3L_7_5045001 chr3L_5045001 RAL-373_125b 1622 chr3L 5066254 5066314 chr3L 5066402 5066463 14 148 1.5 3.0 2.2 4.4 209 chr3L 5066254 intron Con - chr3L 5066358 intron Con - chr3L 5066463 intron Con - chr3L_14_5065001 chr3L_5065001 RAL-373_125b 1623 chr3L 5104434 5104505 chr3L 5124618 5124689 18 20182 3.5 4.0 3.8 3.8 20255 chr3L 5104434 intergenic not near genes chr3L 5114562 intergenic not near genes chr3L 5124689 intergenic not near genes chr3L_18_5110001 chr3L_5110001 RAL-373_125b 1624 chr3L 5130882 5130954 chr3L 5131035 5131107 10 151 4.5 3.0 3.8 2.1 225 chr3L 5130882 intergenic not near genes chr3L 5130994 intergenic not near genes chr3L 5131107 intergenic CG15212 + chr3L_10_5130001 chr3L_5130001 RAL-373_125b 1625 chr3L 5327414 5327477 chr3L 5327549 5327612 14 133 5.5 3.0 4.2 2.7 198 chr3L 5327414 intergenic not near genes chr3L 5327513 intergenic not near genes chr3L 5327612 intergenic not near genes chr3L_14_5325001 chr3L_5325001 RAL-373_125b 1626 chr3L 5351058 5351126 chr3L 5351193 5351261 17 133 5.0 6.0 5.5 2.6 203 chr3L 5351058 intron lama - chr3L 5351160 intron lama - chr3L 5351261 intron lama - chr3L_17_5350001 chr3L_5350001 RAL-373_125b 1627 chr3L 5449484 5449562 chr3L 5449613 5449691 12 128 3.0 4.0 3.5 2.7 207 chr3L 5449484 intergenic not near genes chr3L 5449588 intergenic not near genes chr3L 5449691 intergenic not near genes chr3L_12_5445001 chr3L_5445001 RAL-373_125b 1628 chr3L 5482946 5483072 chr3L 5483169 5483241 7 184 0.0 4.5 2.2 2.2 295 chr3L 5482946 exon CG4835 + chr3L 5483094 exon CG4835 + chr3L 5483241 exon CG4835 + chr3L_7_5480001 chr3L_5480001 RAL-373_125b 1629 chr3L 5498342 5498424 chr3L 5498475 5498551 6 127 1.0 4.0 2.5 1.7 209 chr3L 5498342 exon blanks - chr3L 5498446 exon blanks - chr3L 5498551 exon blanks - chr3L_6_5495001 chr3L_5495001 RAL-373_125b 1630 chr3L 5516362 5516441 chr3L 5516507 5516582 17 140 2.5 5.5 4.0 3.4 220 chr3L 5516362 intron Lkr - chr3L 5516472 intron Lkr - chr3L 5516582 intron Lkr - chr3L_17_5515001 chr3L_5515001 RAL-373_125b 1631 chr3L 5537679 5537743 chr3L 5538070 5538134 jockey 14 388 5.5 4.0 4.8 2.4 455 chr3L 5537679 intergenic not near genes chr3L 5537906 intergenic not near genes chr3L 5538134 intergenic CG10625 - chr3L_14_5535001 chr3L_5535001 RAL-373_125b 1632 chr3L 5572149 5572158 chr3L 5572251 5572292 4 123 7.0 15.5 11.2 0.3 143 chr3L 5572149 intron Msr-110 - chr3L 5572220 intron Msr-110 - chr3L 5572292 intron Msr-110 - chr3L_4_5570001 chr3L_5570001 RAL-373_125b 1633 chr3L 5666266 5666319 chr3L 5666400 5666448 7 129 0.0 4.0 2.0 2.3 182 chr3L 5666266 intron sif + chr3L 5666357 intron sif + chr3L 5666448 intron sif + chr3L_7_5665001 chr3L_5665001 RAL-373_125b 1634 chr3L 5729703 5729758 chr3L 5729830 5729893 10 133 1.0 4.0 2.5 2.9 190 chr3L 5729703 intron sif + chr3L 5729798 intron sif + chr3L 5729893 intron sif + chr3L_10_5725001 chr3L_5725001 RAL-373_125b 1635 chr3L 5809926 5809961 chr3L 5810039 5810070 11 111 8.0 5.5 6.8 1.4 144 chr3L 5809926 intron S6k - chr3L 5809998 intron S6k - chr3L 5810070 intron S6k - chr3L_11_5805001 chr3L_5805001 RAL-373_125b 1636 chr3L 5910002 5910056 chr3L 5910293 5910347 pogo 13 291 9.0 10.0 9.5 1.2 345 chr3L 5910002 intron CG13288 + chr3L 5910174 intron CG13288 + chr3L 5910347 intron CG13288 + chr3L_13_5910001 chr3L_5910001 RAL-373_125b 1637 chr3L 5926282 5926343 chr3L 5926514 5926580 BS 7 235 4.5 8.0 6.2 1.0 298 chr3L 5926282 intron Vap-33B + chr3L 5926431 intron Vap-33B + chr3L 5926580 intron Vap-33B + chr3L_7_5925001 chr3L_5925001 RAL-373_125b 1638 chr3L 5957534 5957594 chr3L 5957654 5957721 14 122 8.0 5.0 6.5 1.9 187 chr3L 5957534 intergenic not near genes chr3L 5957628 intergenic not near genes chr3L 5957721 intergenic not near genes chr3L_14_5955001 chr3L_5955001 RAL-373_125b 1639 chr3L 5992575 5992615 chr3L 5992724 5992767 13 149 7.5 10.0 8.8 1.3 192 chr3L 5992575 intergenic not near genes chr3L 5992671 intergenic not near genes chr3L 5992767 intergenic not near genes chr3L_13_5990001 chr3L_5990001 RAL-373_125b 1640 chr3L 6001639 6001674 chr3L 6004385 6004413 jockey 8 2744 6.5 0.0 3.2 1.9 2774 chr3L 6001639 intron PVRAP + chr3L 6003026 intron PVRAP + chr3L 6004413 intron PVRAP + chr3L_8_6000001 chr3L_6000001 RAL-373_125b 1641 chr3L 6040226 6040263 chr3L 6040351 6040378 7 127 7.0 0.5 3.8 1.5 152 chr3L 6040226 intergenic Jon65Aiv + chr3L 6040302 intergenic Jon65Aiv + chr3L 6040378 intergenic Jon65Aiv + chr3L_7_6040001 chr3L_6040001 RAL-373_125b 1642 chr3L 6040355 6040386 chr3L 6042761 6042786 Doc 13 2402 0.0 12.5 6.2 1.8 2431 chr3L 6040355 intergenic Jon65Aiv + chr3L 6041570 intergenic not near genes chr3L 6042786 intergenic not near genes chr3L_13_6040001 chr3L_6040001 RAL-373_125b 1643 chr3L 6052627 6052659 chr3L 6052753 6052780 7 120 12.5 7.5 10.0 0.6 153 chr3L 6052627 exon Jon65Aii + chr3L 6052704 intron Jon65Aii + chr3L 6052780 exon Jon65Aii + chr3L_7_6050001 chr3L_6050001 RAL-373_125b 1644 chr3L 6064965 6065040 chr3L 6065091 6065167 17 123 6.0 3.5 4.8 2.9 202 chr3L 6064965 intergenic not near genes chr3L 6065066 intergenic not near genes chr3L 6065167 intergenic not near genes chr3L_17_6065001 chr3L_6065001 RAL-373_125b 1645 chr3L 6071649 6071698 chr3L 6071950 6072007 15 308 6.0 12.5 9.2 1.5 358 chr3L 6071649 intergenic CG42269 +,CG6602 + chr3L 6071828 intergenic CG42269 +,CG6602 + chr3L 6072007 intergenic CG6602 +,CG42269 + chr3L_15_6070001 chr3L_6070001 RAL-373_125b 1646 chr3L 6116660 6116723 chr3L 6116783 6116857 14 130 5.0 5.0 5.0 2.3 197 chr3L 6116660 intron Ets65A + chr3L 6116758 intron Ets65A + chr3L 6116857 intron Ets65A + chr3L_14_6115001 chr3L_6115001 RAL-373_125b 1647 chr3L 6119133 6119161 chr3L 6119260 6119288 5 127 5.5 4.5 5.0 0.8 155 chr3L 6119133 exon Ets65A + chr3L 6119210 intron Ets65A + chr3L 6119288 intron Ets65A + chr3L_5_6115001 chr3L_6115001 RAL-373_125b 1648 chr3L 6220876 6220916 chr3L 6230071 6230118 roo 12 9196 7.5 5.5 6.5 1.6 9242 chr3L 6220876 5` UTR pncr008:3L + chr3L 6225497 intergenic not near genes chr3L 6230118 intergenic not near genes chr3L_12_6225001 chr3L_6225001 RAL-373_125b 1649 chr3L 6220922 6220942 chr3L 6230103 6230144 roo 8 9197 2.5 9.5 6.0 1.1 9222 chr3L 6220922 5` UTR pncr008:3L + chr3L 6225533 intergenic not near genes chr3L 6230144 intergenic not near genes chr3L_8_6225001 chr3L_6225001 RAL-373_125b 1650 chr3L 6231166 6231360 chr3L 6231296 6231496 14 132 4.5 5.0 4.8 2.4 330 chr3L 6231166 intergenic not near genes chr3L 6231331 intergenic CG13299 - chr3L 6231496 intergenic CG13299 - chr3L_14_6230001 chr3L_6230001 RAL-373_125b 1651 chr3L 6261788 6261854 chr3L 6262100 6262166 20 310 4.0 6.0 5.0 3.3 378 chr3L 6261788 intron ImpL3 - chr3L 6261977 intron ImpL3 - chr3L 6262166 intron ImpL3 - chr3L_20_6260001 chr3L_6260001 RAL-373_125b 1652 chr3L 6280140 6280165 chr3L 6280262 6280287 5 120 5.5 1.0 3.2 1.2 147 chr3L 6280140 intergenic not near genes chr3L 6280214 intergenic not near genes chr3L 6280287 intergenic not near genes chr3L_5_6280001 chr3L_6280001 RAL-373_125b 1653 chr3L 6332234 6332268 chr3L 6332371 6332400 5 135 1.5 0.0 0.8 2.8 166 chr3L 6332234 intron CG13300 - chr3L 6332317 intron CG13300 - chr3L 6332400 intron CG13300 - chr3L_5_6330001 chr3L_6330001 RAL-373_125b 1654 chr3L 6334984 6335037 chr3L 6335493 6335547 297 13 514 8.5 7.0 7.8 1.5 563 chr3L 6334984 intron CG13300 - chr3L 6335266 intron CG13300 - chr3L 6335547 intron CG13300 - chr3L_13_6335001 chr3L_6335001 RAL-373_125b 1655 chr3L 6362336 6362411 chr3L 6362461 6362538 9 125 6.5 2.0 4.2 1.7 202 chr3L 6362336 intergenic not near genes chr3L 6362437 intergenic not near genes chr3L 6362538 intergenic not near genes chr3L_9_6360001 chr3L_6360001 RAL-373_125b 1656 chr3L 6371414 6371454 chr3L 6371528 6371576 6 124 3.5 4.0 3.8 1.2 162 chr3L 6371414 intergenic not near genes chr3L 6371495 intergenic not near genes chr3L 6371576 intergenic not near genes chr3L_6_6370001 chr3L_6370001 RAL-373_125b 1657 chr3L 6405615 6405654 chr3L 6432130 6432163 roo 4 26512 7.0 0.0 3.5 0.9 26548 chr3L 6405615 intron CG42747 + chr3L 6418889 intron CG42747 + chr3L 6432163 intron CG42747 + chr3L_4_6415001 chr3L_6415001 RAL-373_125b 1658 chr3L 6562836 6562865 chr3L 6562958 6562994 6 128 3.5 6.5 5.0 1.0 158 chr3L 6562836 intron CG18769 + chr3L 6562915 intron CG18769 + chr3L 6562994 intron CG18769 + chr3L_6_6560001 chr3L_6560001 RAL-373_125b 1659 chr3L 6582414 6582453 chr3L 6582565 6582604 14 150 5.5 4.0 4.8 2.4 190 chr3L 6582414 intron,intron CG18769 +,jv - chr3L 6582509 intron,intron CG18769 +,jv - chr3L 6582604 intron,intron CG18769 +,jv - chr3L_14_6580001 chr3L_6580001 RAL-373_125b 1660 chr3L 6582454 6582460 chr3L 6582605 6582611 4 151 5.0 10.0 7.5 0.5 157 chr3L 6582454 intron,intron CG18769 +,jv - chr3L 6582532 intron,intron CG18769 +,jv - chr3L 6582611 intron,intron CG18769 +,jv - chr3L_4_6580001 chr3L_6580001 RAL-373_125b 1661 chr3L 6582462 6582490 chr3L 6582598 6582642 5 149 3.0 9.0 6.0 0.7 180 chr3L 6582462 intron,intron CG18769 +,jv - chr3L 6582552 intron,intron CG18769 +,jv - chr3L 6582642 intron,intron CG18769 +,jv - chr3L_5_6580001 chr3L_6580001 RAL-373_125b 1662 chr3L 6620575 6620597 chr3L 6621052 6621079 Rt1c 6 482 4.5 9.0 6.8 0.8 504 chr3L 6620575 intergenic not near genes chr3L 6620827 intergenic not near genes chr3L 6621079 intergenic not near genes chr3L_6_6620001 chr3L_6620001 RAL-373_125b 1663 chr3L 6637067 6637134 chr3L 6637198 6637265 16 127 5.5 6.5 6.0 2.3 198 chr3L 6637067 intergenic not near genes chr3L 6637166 intergenic not near genes chr3L 6637265 intergenic not near genes chr3L_16_6635001 chr3L_6635001 RAL-373_125b 1664 chr3L 6652040 6652110 chr3L 6652168 6652232 36 122 7.0 8.0 7.5 4.2 192 chr3L 6652040 intergenic not near genes chr3L 6652136 intergenic not near genes chr3L 6652232 intergenic not near genes chr3L_36_6650001 chr3L_6650001 RAL-373_125b 1665 chr3L 6726813 6726824 chr3L 6726939 6726950 4 125 0.0 9.5 4.8 0.7 137 chr3L 6726813 intergenic not near genes chr3L 6726882 intergenic not near genes chr3L 6726950 intergenic not near genes chr3L_4_6725001 chr3L_6725001 RAL-373_125b 1666 chr3L 6781076 6781138 chr3L 6783139 6783198 Doc 7 2059 5.0 0.0 2.5 2.0 2122 chr3L 6781076 intergenic not near genes chr3L 6782137 intergenic not near genes chr3L 6783198 intergenic not near genes chr3L_7_6780001 chr3L_6780001 RAL-373_125b 1667 chr3L 6820606 6820633 chr3L 6820739 6820761 5 131 1.5 7.5 4.5 0.9 155 chr3L 6820606 intergenic not near genes chr3L 6820684 intergenic not near genes chr3L 6820761 intergenic not near genes chr3L_5_6820001 chr3L_6820001 RAL-373_125b 1668 chr3L 6835881 6835923 chr3L 6836009 6836051 7 127 3.0 6.5 4.8 1.2 170 chr3L 6835881 intergenic not near genes chr3L 6835966 intergenic not near genes chr3L 6836051 intergenic not near genes chr3L_7_6835001 chr3L_6835001 RAL-373_125b 1669 chr3L 6855894 6855953 chr3L 6860719 6860784 Doc 19 4829 5.5 8.5 7.0 2.4 4890 chr3L 6855894 intergenic not near genes chr3L 6858339 intergenic not near genes chr3L 6860784 intergenic not near genes chr3L_19_6855001 chr3L_6855001 RAL-373_125b 1670 chr3L 6880476 6880522 chr3L 6880668 6880676 7 189 4.5 5.0 4.8 1.2 200 chr3L 6880476 intergenic not near genes chr3L 6880576 intergenic not near genes chr3L 6880676 intergenic not near genes chr3L_7_6880001 chr3L_6880001 RAL-373_125b 1671 chr3L 6887475 6887537 chr3L 6895017 6895079 roo 14 7538 5.5 5.5 5.5 2.2 7604 chr3L 6887475 intergenic not near genes chr3L 6891277 intergenic not near genes chr3L 6895079 intergenic not near genes chr3L_14_6890001 chr3L_6890001 RAL-373_125b 1672 chr3L 6907991 6908034 chr3L 6908101 6908155 7 122 6.5 0.0 3.2 1.7 164 chr3L 6907991 intergenic not near genes chr3L 6908073 intergenic not near genes chr3L 6908155 intergenic not near genes chr3L_7_6905001 chr3L_6905001 RAL-373_125b 1673 chr3L 6919734 6919780 chr3L 6919854 6919910 7 126 6.0 3.0 4.5 1.3 176 chr3L 6919734 intergenic not near genes chr3L 6919822 intergenic not near genes chr3L 6919910 intergenic not near genes chr3L_7_6915001 chr3L_6915001 RAL-373_125b 1674 chr3L 6923346 6923422 chr3L 6923481 6923557 21 134 5.5 9.5 7.5 2.5 211 chr3L 6923346 intergenic not near genes chr3L 6923452 intergenic not near genes chr3L 6923557 intergenic not near genes chr3L_21_6920001 chr3L_6920001 RAL-373_125b 1675 chr3L 6974440 6974518 chr3L 6974591 6974631 16 146 4.5 6.5 5.5 2.5 191 chr3L 6974440 exon Galphai - chr3L 6974536 intron Galphai - chr3L 6974631 intron Galphai - chr3L_16_6970001 chr3L_6970001 RAL-373_125b 1676 chr3L 6997356 6997414 chr3L 6997540 6997587 4 172 38.5 31.0 34.8 0.1 231 chr3L 6997356 intergenic not near genes chr3L 6997472 intergenic not near genes chr3L 6997587 intergenic not near genes chr3L_4_6995001 chr3L_6995001 RAL-373_125b 1677 chr3L 7001938 7001970 chr3L 7002109 7002141 7 169 3.5 5.5 4.5 1.3 203 chr3L 7001938 intron Mp + chr3L 7002040 intron Mp + chr3L 7002141 intron Mp + chr3L_7_7000001 chr3L_7000001 RAL-373_125b 1678 chr3L 7007372 7007390 chr3L 7007517 7007535 6 145 0.0 10.0 5.0 1.0 163 chr3L 7007372 intron Mp + chr3L 7007454 intron Mp + chr3L 7007535 intron Mp + chr3L_6_7005001 chr3L_7005001 RAL-373_125b 1679 chr3L 7013409 7013446 chr3L 7013547 7013594 4 144 6.0 0.0 3.0 1.0 185 chr3L 7013409 intron Mp + chr3L 7013502 intron Mp + chr3L 7013594 intron Mp + chr3L_4_7010001 chr3L_7010001 RAL-373_125b 1680 chr3L 7061357 7061398 chr3L 7061492 7061528 15 134 5.5 4.5 5.0 2.5 171 chr3L 7061357 intron CG8641 - chr3L 7061442 intron CG8641 - chr3L 7061528 intron CG8641 - chr3L_15_7060001 chr3L_7060001 RAL-373_125b 1681 chr3L 7112545 7112607 chr3L 7112682 7112723 22 134 9.5 7.0 8.2 2.4 178 chr3L 7112545 intron form3 + chr3L 7112634 intron form3 + chr3L 7112723 intron form3 + chr3L_22_7110001 chr3L_7110001 RAL-373_125b 1682 chr3L 7129907 7129977 chr3L 7130149 7130219 BS 6 241 0.5 4.5 2.5 1.7 312 chr3L 7129907 intergenic CG15829 + chr3L 7130063 intergenic CG15829 + chr3L 7130219 intergenic not near genes chr3L_6_7130001 chr3L_7130001 RAL-373_125b 1683 chr3L 7244922 7244963 chr3L 7245026 7245045 8 121 4.5 5.0 4.8 1.4 123 chr3L 7244922 exon mei-P22 + chr3L 7244984 exon mei-P22 + chr3L 7245045 exon mei-P22 + chr3L_8_7240001 chr3L_7240001 RAL-373_125b 1684 chr3L 7258878 7258931 chr3L 7259068 7259121 10 188 3.5 5.0 4.2 1.9 243 chr3L 7258878 intron CG14830 - chr3L 7259000 intron CG14830 - chr3L 7259121 intron CG14830 - chr3L_10_7255001 chr3L_7255001 RAL-373_125b 1685 chr3L 7276157 7276168 chr3L 7276274 7276295 9 124 3.5 7.5 5.5 1.4 138 chr3L 7276157 intron unc-13-4A - chr3L 7276226 intron unc-13-4A - chr3L 7276295 intron unc-13-4A - chr3L_9_7275001 chr3L_7275001 RAL-373_125b 1686 chr3L 7328893 7328913 chr3L 7329024 7329044 5 131 12.0 0.0 6.0 0.7 151 chr3L 7328893 intergenic CG8602 -,CG42307 +,mus312 + chr3L 7328968 intergenic CG8602 -,CG42307 +,mus312 + chr3L 7329044 intergenic CG42307 +,mus312 +,CG8602 - chr3L_5_7325001 chr3L_7325001 RAL-373_125b 1687 chr3L 7371154 7371205 chr3L 7371272 7371329 7 128 3.0 6.5 4.8 1.2 175 chr3L 7371154 intron akirin + chr3L 7371242 intron akirin + chr3L 7371329 intron akirin + chr3L_7_7370001 chr3L_7370001 RAL-373_125b 1688 chr3L 7375889 7375895 chr3L 7376004 7376021 6 124 14.5 5.0 9.8 0.6 132 chr3L 7375889 exon SMSr - chr3L 7375955 intron SMSr - chr3L 7376021 intron SMSr - chr3L_6_7375001 chr3L_7375001 RAL-373_125b 1689 chr3L 7375902 7375951 chr3L 7376002 7376077 10 120 6.5 5.5 6.0 1.4 175 chr3L 7375902 exon SMSr - chr3L 7375990 intron SMSr - chr3L 7376077 intron SMSr - chr3L_10_7375001 chr3L_7375001 RAL-373_125b 1690 chr3L 7377269 7377337 chr3L 7380424 7380486 297 19 3153 5.0 6.0 5.5 2.9 3217 chr3L 7377269 intron SMSr - chr3L 7378878 intron SMSr - chr3L 7380486 intron SMSr - chr3L_19_7375001 chr3L_7375001 RAL-373_125b 1691 chr3L 7422884 7422916 chr3L 7423020 7423052 7 134 3.5 0.0 1.8 2.5 168 chr3L 7422884 intergenic not near genes chr3L 7422968 intergenic not near genes chr3L 7423052 intergenic not near genes chr3L_7_7420001 chr3L_7420001 RAL-373_125b 1692 chr3L 7449425 7449436 chr3L 7449553 7449554 5 125 0.0 8.5 4.2 1.0 129 chr3L 7449425 intron CG42458 + chr3L 7449490 intron CG42458 + chr3L 7449554 intron CG42458 + chr3L_5_7445001 chr3L_7445001 RAL-373_125b 1693 chr3L 7449439 7449454 chr3L 7449542 7449582 5 120 1.5 8.0 4.8 0.9 143 chr3L 7449439 intron CG42458 + chr3L 7449510 intron CG42458 + chr3L 7449582 intron CG42458 + chr3L_5_7445001 chr3L_7445001 RAL-373_125b 1694 chr3L 7455237 7455301 chr3L 7455400 7455464 7 162 0.0 7.0 3.5 1.6 227 chr3L 7455237 intergenic not near genes chr3L 7455350 intergenic not near genes chr3L 7455464 intergenic not near genes chr3L_7_7455001 chr3L_7455001 RAL-373_125b 1695 chr3L 7498729 7498774 chr3L 7503551 7503601 F-element 13 4825 9.0 9.5 9.2 1.3 4872 chr3L 7498729 5` UTR CG8539 - chr3L 7501165 intergenic not near genes chr3L 7503601 intergenic not near genes chr3L_13_7500001 chr3L_7500001 RAL-373_125b 1696 chr3L 7505386 7505440 chr3L 7505508 7505566 12 125 6.5 9.0 7.8 1.4 180 chr3L 7505386 intergenic CG7548 - chr3L 7505476 intergenic CG7548 - chr3L 7505566 3` UTR CG7548 - chr3L_12_7505001 chr3L_7505001 RAL-373_125b 1697 chr3L 7524113 7524171 chr3L 7524260 7524312 15 144 5.0 2.0 3.5 3.3 199 chr3L 7524113 intron ltl + chr3L 7524212 intron ltl + chr3L 7524312 intron ltl + chr3L_15_7520001 chr3L_7520001 RAL-373_125b 1698 chr3L 7581589 7581646 chr3L 7581714 7581780 8 113 4.0 5.5 4.8 1.4 191 chr3L 7581589 intergenic not near genes chr3L 7581684 intergenic not near genes chr3L 7581780 intergenic not near genes chr3L_8_7580001 chr3L_7580001 RAL-373_125b 1699 chr3L 7591102 7591178 chr3L 7591243 7591292 13 134 3.5 5.5 4.5 2.4 190 chr3L 7591102 intergenic CG7716 - chr3L 7591197 intergenic CG7716 - chr3L 7591292 intergenic CG7716 - chr3L_13_7590001 chr3L_7590001 RAL-373_125b 1700 chr3L 7591853 7591912 chr3L 7591977 7592039 17 118 5.5 1.5 3.5 3.8 186 chr3L 7591853 intergenic not near genes chr3L 7591946 intergenic not near genes chr3L 7592039 intergenic not near genes chr3L_17_7590001 chr3L_7590001 RAL-373_125b 1701 chr3L 7591920 7591928 chr3L 7591973 7592055 5 107 3.0 1.0 2.0 1.7 135 chr3L 7591920 intergenic not near genes chr3L 7591988 intergenic not near genes chr3L 7592055 intergenic not near genes chr3L_5_7590001 chr3L_7590001 RAL-373_125b 1702 chr3L 7737345 7737403 chr3L 7737595 7737654 8 249 2.5 1.5 2.0 2.7 309 chr3L 7737345 intron,intron CG32373 +,Snmp2 - chr3L 7737500 intron,intron CG32373 +,Snmp2 - chr3L 7737654 intron,intron CG32373 +,Snmp2 - chr3L_8_7735001 chr3L_7735001 RAL-373_125b 1703 chr3L 7744662 7744716 chr3L 7744804 7744853 17 140 9.5 3.5 6.5 2.3 191 chr3L 7744662 intron CG32373 + chr3L 7744758 intron CG32373 + chr3L 7744853 intron CG32373 + chr3L_17_7740001 chr3L_7740001 RAL-373_125b 1704 chr3L 7744717 7744731 chr3L 7744799 7744873 4 124 6.5 3.0 4.8 0.7 156 chr3L 7744717 intron CG32373 + chr3L 7744795 intron CG32373 + chr3L 7744873 intron CG32373 + chr3L_4_7740001 chr3L_7740001 RAL-373_125b 1705 chr3L 7760036 7760044 chr3L 7760162 7760170 4 126 17.0 4.0 10.5 0.3 134 chr3L 7760036 intergenic Hn + chr3L 7760103 intergenic Hn + chr3L 7760170 intergenic Hn + chr3L_4_7760001 chr3L_7760001 RAL-373_125b 1706 chr3L 7792013 7792065 chr3L 7792146 7792189 23 130 7.5 3.0 5.2 3.7 176 chr3L 7792013 intron CG32369 - chr3L 7792101 intron CG32369 - chr3L 7792189 intron CG32369 - chr3L_23_7790001 chr3L_7790001 RAL-373_125b 1707 chr3L 7793671 7793733 chr3L 7800773 7800835 297 16 7098 4.5 10.0 7.2 2.0 7164 chr3L 7793671 intron CG32369 - chr3L 7797253 intron CG32369 - chr3L 7800835 intron CG32369 - chr3L_16_7795001 chr3L_7795001 RAL-373_125b 1708 chr3L 7843835 7843898 chr3L 7843981 7844044 16 144 6.5 2.5 4.5 2.9 209 chr3L 7843835 intron Pdp1 - chr3L 7843940 intron Pdp1 - chr3L 7844044 intron Pdp1 - chr3L_16_7840001 chr3L_7840001 RAL-373_125b 1709 chr3L 7874982 7875064 chr3L 7876862 7876944 7 1879 0.5 4.5 2.5 2.0 1962 chr3L 7874982 intron CG32365 + chr3L 7875963 intron CG32365 + chr3L 7876944 intron CG32365 + chr3L_7_7875001 chr3L_7875001 RAL-373_125b 1710 chr3L 7886477 7886541 chr3L 7889043 7889109 Stalker4 13 2565 4.0 5.0 4.5 2.4 2632 chr3L 7886477 intron CG32365 + chr3L 7887793 intron CG32365 + chr3L 7889109 intron CG32365 + chr3L_13_7885001 chr3L_7885001 RAL-373_125b 1711 chr3L 7916790 7916853 chr3L 7926011 7926066 roo 16 9219 5.5 8.0 6.8 2.1 9276 chr3L 7916790 3` UTR syd - chr3L 7921428 intron syd - chr3L 7926066 3` UTR syd - chr3L_16_7920001 chr3L_7920001 RAL-373_125b 1712 chr3L 7939418 7939469 chr3L 7939540 7939599 10 130 4.5 6.0 5.2 1.6 181 chr3L 7939418 intergenic not near genes chr3L 7939508 intergenic not near genes chr3L 7939599 intergenic not near genes chr3L_10_7935001 chr3L_7935001 RAL-373_125b 1713 chr3L 7985337 7985380 chr3L 7987695 7987758 NOF 15 2374 4.5 1.5 3.0 3.8 2421 chr3L 7985337 intron nmo + chr3L 7986548 intron nmo + chr3L 7987758 intron nmo + chr3L_15_7985001 chr3L_7985001 RAL-373_125b 1714 chr3L 7998832 7998892 chr3L 7998963 7999025 9 132 0.0 4.0 2.0 3.0 193 chr3L 7998832 intron nmo + chr3L 7998928 intron nmo + chr3L 7999025 intron nmo + chr3L_9_7995001 chr3L_7995001 RAL-373_125b 1715 chr3L 8062798 8062851 chr3L 8062925 8062978 10 122 4.5 8.5 6.5 1.3 180 chr3L 8062798 intergenic not near genes chr3L 8062888 intergenic not near genes chr3L 8062978 intergenic not near genes chr3L_10_8060001 chr3L_8060001 RAL-373_125b 1716 chr3L 8149716 8149776 chr3L 8149871 8149927 10 155 4.0 8.5 6.2 1.4 211 chr3L 8149716 intron CG13676 - chr3L 8149822 intron CG13676 - chr3L 8149927 intron CG13676 - chr3L_10_8145001 chr3L_8145001 RAL-373_125b 1717 chr3L 8203500 8203560 chr3L 8203616 8203687 15 113 6.0 5.5 5.8 2.2 187 chr3L 8203500 intergenic CG13679 + chr3L 8203594 intergenic CG13679 + chr3L 8203687 intergenic CG13679 + chr3L_15_8200001 chr3L_8200001 RAL-373_125b 1718 chr3L 8233557 8233584 chr3L 8238853 8238885 Rt1a 10 5304 4.5 6.0 5.2 1.6 5328 chr3L 8233557 intron CG7213 - chr3L 8236221 intron CG7213 - chr3L 8238885 intron,intron CG7213 -,Dscam4 + chr3L_10_8235001 chr3L_8235001 RAL-373_125b 1719 chr3L 8295763 8295817 chr3L 8295971 8296025 19 206 5.0 9.5 7.2 2.3 262 chr3L 8295763 intergenic CG7201 - chr3L 8295894 intergenic not near genes chr3L 8296025 intergenic not near genes chr3L_19_8295001 chr3L_8295001 RAL-373_125b 1720 chr3L 8364485 8364520 chr3L 8364626 8364661 5 140 9.5 4.5 7.0 0.6 176 chr3L 8364485 intergenic not near genes chr3L 8364573 intergenic not near genes chr3L 8364661 intergenic not near genes chr3L_5_8360001 chr3L_8360001 RAL-373_125b 1721 chr3L 8383955 8384005 chr3L 8384056 8384110 12 96 4.5 2.5 3.5 2.7 155 chr3L 8383955 intron ImpE1 + chr3L 8384032 intron ImpE1 + chr3L 8384110 intron ImpE1 + chr3L_12_8380001 chr3L_8380001 RAL-373_125b 1722 chr3L 8451349 8451404 chr3L 8451477 8451532 10 128 3.0 5.0 4.0 2.0 183 chr3L 8451349 intron Gug + chr3L 8451440 intron Gug + chr3L 8451532 intron Gug + chr3L_10_8450001 chr3L_8450001 RAL-373_125b 1723 chr3L 8456444 8456485 chr3L 8456571 8456599 14 124 14.0 11.0 12.5 1.0 155 chr3L 8456444 intron Gug + chr3L 8456522 intron Gug + chr3L 8456599 intron Gug + chr3L_14_8455001 chr3L_8455001 RAL-373_125b 1724 chr3L 8481783 8481798 chr3L 8490958 8490988 roo 4 9194 6.0 5.5 5.8 0.6 9205 chr3L 8481783 intron CG43163 - chr3L 8486386 intron CG43163 - chr3L 8490988 intron CG43163 - chr3L_4_8485001 chr3L_8485001 RAL-373_125b 1725 chr3L 8498261 8498318 chr3L 8505771 8505835 blood 16 7516 8.5 4.0 6.2 2.2 7574 chr3L 8498261 intron CG43163 - chr3L 8502048 intron CG43163 - chr3L 8505835 intron CG43163 - chr3L_16_8500001 chr3L_8500001 RAL-373_125b 1726 chr3L 8539795 8539810 chr3L 8539924 8539939 7 129 11.5 6.0 8.8 0.7 144 chr3L 8539795 intergenic not near genes chr3L 8539867 intergenic not near genes chr3L 8539939 intergenic not near genes chr3L_7_8535001 chr3L_8535001 RAL-373_125b 1727 chr3L 8539811 8539847 chr3L 8539921 8539966 9 126 5.5 5.5 5.5 1.4 155 chr3L 8539811 intergenic not near genes chr3L 8539888 intergenic not near genes chr3L 8539966 intergenic not near genes chr3L_9_8535001 chr3L_8535001 RAL-373_125b 1728 chr3L 8579804 8579863 chr3L 8579933 8579986 18 124 9.0 4.0 6.5 2.4 182 chr3L 8579804 intron CG43078 + chr3L 8579895 intron CG43078 + chr3L 8579986 intron CG43078 + chr3L_18_8575001 chr3L_8575001 RAL-373_125b 1729 chr3L 8643533 8643601 chr3L 8643659 8643727 12 125 5.5 6.0 5.8 1.8 194 chr3L 8643533 3` UTR Cpr66D + chr3L 8643630 intergenic Cpr66D + chr3L 8643727 intergenic Cpr66D + chr3L_12_8640001 chr3L_8640001 RAL-373_125b 1730 chr3L 8690556 8690629 chr3L 8690851 8690901 29 288 8.0 13.0 10.5 2.5 345 chr3L 8690556 intergenic not near genes chr3L 8690728 intergenic not near genes chr3L 8690901 intergenic not near genes chr3L_29_8690001 chr3L_8690001 RAL-373_125b 1731 chr3L 8712890 8712891 chr3L 8713135 8713156 6 247 56.0 55.0 55.5 0.1 266 chr3L 8712890 intergenic not near genes chr3L 8713023 intergenic not near genes chr3L 8713156 intergenic not near genes chr3L_6_8710001 chr3L_8710001 RAL-373_125b 1732 chr3L 8752366 8752417 chr3L 8752604 8752655 19 235 5.5 6.0 5.8 2.8 289 chr3L 8752366 intergenic not near genes chr3L 8752510 intergenic not near genes chr3L 8752655 intergenic not near genes chr3L_19_8750001 chr3L_8750001 RAL-373_125b 1733 chr3L 8772016 8772082 chr3L 8772134 8772206 29 125 5.0 5.5 5.2 4.7 190 chr3L 8772016 intron Fhos + chr3L 8772111 intron Fhos + chr3L 8772206 intron Fhos + chr3L_29_8770001 chr3L_8770001 RAL-373_125b 1734 chr3L 8791240 8791300 chr3L 8796705 8796769 I-element 13 5468 12.5 0.0 6.2 1.8 5529 chr3L 8791240 exon Fhos + chr3L 8794004 intron Fhos + chr3L 8796769 intron Fhos + chr3L_13_8790001 chr3L_8790001 RAL-373_125b 1735 chr3L 8839718 8839756 chr3L 8839857 8839894 10 136 6.0 5.5 5.8 1.5 176 chr3L 8839718 intron dally + chr3L 8839806 intron dally + chr3L 8839894 intron dally + chr3L_10_8835001 chr3L_8835001 RAL-373_125b 1736 chr3L 8884366 8884426 chr3L 8884604 8884675 9 240 2.0 0.5 1.2 4.1 309 chr3L 8884366 intron dally + chr3L 8884520 intron dally + chr3L 8884675 intron dally + chr3L_9_8880001 chr3L_8880001 RAL-373_125b 1737 chr3L 8928233 8928297 chr3L 8928348 8928423 24 124 5.0 7.0 6.0 3.4 190 chr3L 8928233 intron Tsp66E + chr3L 8928328 intron Tsp66E + chr3L 8928423 intron Tsp66E + chr3L_24_8925001 chr3L_8925001 RAL-373_125b 1738 chr3L 8950510 8950577 chr3L 8950648 8950720 15 141 7.5 5.0 6.2 2.1 210 chr3L 8950510 intron,intron CG43783 -,orb2 - chr3L 8950615 intron,intron CG43783 -,orb2 - chr3L 8950720 intron,intron CG43783 -,orb2 - chr3L_15_8950001 chr3L_8950001 RAL-373_125b 1739 chr3L 9003912 9003975 chr3L 9004034 9004110 22 126 3.5 2.0 2.8 5.8 198 chr3L 9003912 intergenic not near genes chr3L 9004011 intergenic not near genes chr3L 9004110 intergenic not near genes chr3L_22_9000001 chr3L_9000001 RAL-373_125b 1740 chr3L 9009915 9009977 chr3L 9010069 9010130 15 153 3.5 6.0 4.8 2.6 215 chr3L 9009915 intergenic CG5194 - chr3L 9010022 intergenic CG5194 - chr3L 9010130 intergenic CG5194 - chr3L_15_9010001 chr3L_9010001 RAL-373_125b 1741 chr3L 9030384 9030456 chr3L 9030513 9030585 8 128 3.5 4.0 3.8 1.7 201 chr3L 9030384 intergenic not near genes chr3L 9030484 intergenic not near genes chr3L 9030585 intergenic not near genes chr3L_8_9030001 chr3L_9030001 RAL-373_125b 1742 chr3L 9036266 9036281 chr3L 9036389 9036410 7 131 6.0 8.0 7.0 0.9 144 chr3L 9036266 intergenic not near genes chr3L 9036338 intergenic not near genes chr3L 9036410 intergenic not near genes chr3L_7_9035001 chr3L_9035001 RAL-373_125b 1743 chr3L 9076888 9076948 chr3L 9084491 9084555 412 21 7606 6.5 5.0 5.8 3.1 7667 chr3L 9076888 exon Tequila + chr3L 9080722 intron Tequila + chr3L 9084555 exon Tequila + chr3L_21_9080001 chr3L_9080001 RAL-373_125b 1744 chr3L 9110038 9110051 chr3L 9110266 9110282 6 228 2.0 15.5 8.8 0.6 244 chr3L 9110038 intron bol - chr3L 9110160 intron bol - chr3L 9110282 intron bol - chr3L_6_9110001 chr3L_9110001 RAL-373_125b 1745 chr3L 9115197 9115275 chr3L 9115328 9115378 14 124 7.0 4.0 5.5 2.2 181 chr3L 9115197 intron bol - chr3L 9115288 intron bol - chr3L 9115378 intron bol - chr3L_14_9115001 chr3L_9115001 RAL-373_125b 1746 chr3L 9130534 9130577 chr3L 9134325 9134368 412 11 3799 8.5 5.0 6.8 1.4 3834 chr3L 9130534 intergenic bol - chr3L 9132451 intergenic not near genes chr3L 9134368 intergenic Dhpr + chr3L_11_9130001 chr3L_9130001 RAL-373_125b 1747 chr3L 9164657 9164690 chr3L 9166168 9166192 hobo 8 1510 12.5 0.5 6.5 1.1 1535 chr3L 9164657 intron Rdl - chr3L 9165424 intron Rdl - chr3L 9166192 intron Rdl - chr3L_8_9165001 chr3L_9165001 RAL-373_125b 1748 chr3L 9167240 9167297 chr3L 9167371 9167403 9 126 3.0 4.5 3.8 1.9 163 chr3L 9167240 intron Rdl - chr3L 9167322 intron Rdl - chr3L 9167403 intron Rdl - chr3L_9_9165001 chr3L_9165001 RAL-373_125b 1749 chr3L 9219212 9219268 chr3L 9219924 9219978 jockey 19 713 6.5 10.5 8.5 2.0 766 chr3L 9219212 intergenic not near genes chr3L 9219595 intergenic not near genes chr3L 9219978 intergenic not near genes chr3L_19_9215001 chr3L_9215001 RAL-373_125b 1750 chr3L 9237503 9237539 chr3L 9237639 9237675 5 135 4.0 3.0 3.5 1.1 172 chr3L 9237503 intergenic not near genes chr3L 9237589 intergenic not near genes chr3L 9237675 intergenic not near genes chr3L_5_9235001 chr3L_9235001 RAL-373_125b 1751 chr3L 9241076 9241147 chr3L 9241206 9241277 18 127 2.5 3.5 3.0 4.5 201 chr3L 9241076 intergenic not near genes chr3L 9241176 intergenic not near genes chr3L 9241277 intergenic not near genes chr3L_18_9240001 chr3L_9240001 RAL-373_125b 1752 chr3L 9270577 9270651 chr3L 9278382 9278402 roo 19 7786 6.0 8.5 7.2 2.3 7825 chr3L 9270577 intron GluRIB + chr3L 9274490 intron GluRIB + chr3L 9278402 exon GluRIB + chr3L_19_9270001 chr3L_9270001 RAL-373_125b 1753 chr3L 9307796 9307796 chr3L 22908066 22908066 5 13600270 15.0 25.0 20.0 0.2 13600270 chr3L 9307796 intergenic not near genes chr3L 16107931 intron Zn72D - chr3L 22908066 intergenic not near genes chr3L_5_16105001 chr3L_16105001 RAL-373_125b 1754 chr3L 9313984 9314061 chr3L 9314125 9314189 8 138 0.0 1.5 0.8 4.4 205 chr3L 9313984 intergenic not near genes chr3L 9314086 intergenic not near genes chr3L 9314189 intergenic not near genes chr3L_8_9310001 chr3L_9310001 RAL-373_125b 1755 chr3L 9323843 9323852 chr3L 9323948 9323975 4 118 8.0 4.5 6.2 0.6 132 chr3L 9323843 intergenic not near genes chr3L 9323909 intergenic not near genes chr3L 9323975 intergenic not near genes chr3L_4_9320001 chr3L_9320001 RAL-373_125b 1756 chr3L 9359539 9359611 chr3L 9359680 9359752 11 140 1.5 7.5 4.5 2.0 213 chr3L 9359539 3` UTR CG32039 + chr3L 9359646 3` UTR CG32039 + chr3L 9359752 3` UTR CG32039 + chr3L_11_9355001 chr3L_9355001 RAL-373_125b 1757 chr3L 9501678 9501734 chr3L 9502211 9502261 roo 29 530 4.0 8.0 6.0 4.1 583 chr3L 9501678 intron path - chr3L 9501970 intron path - chr3L 9502261 intron path - chr3L_29_9500001 chr3L_9500001 RAL-373_125b 1758 chr3L 9502566 9502643 chr3L 9502696 9502773 19 129 4.5 2.5 3.5 4.2 207 chr3L 9502566 intron path - chr3L 9502670 intron path - chr3L 9502773 intron path - chr3L_19_9500001 chr3L_9500001 RAL-373_125b 1759 chr3L 9503418 9503460 chr3L 9503557 9503594 8 137 7.5 8.5 8.0 0.9 176 chr3L 9503418 intron path - chr3L 9503506 intron path - chr3L 9503594 intron path - chr3L_8_9500001 chr3L_9500001 RAL-373_125b 1760 chr3L 9510860 9510955 chr3L 9511003 9511074 12 139 0.0 6.5 3.2 2.9 214 chr3L 9510860 intron RpS9 - chr3L 9510967 intron RpS9 - chr3L 9511074 exon RpS9 - chr3L_12_9510001 chr3L_9510001 RAL-373_125b 1761 chr3L 9533716 9533733 chr3L 9541317 9541342 412 4 7608 13.0 8.5 10.8 0.3 7626 chr3L 9533716 intergenic not near genes chr3L 9537529 intergenic not near genes chr3L 9541342 intergenic not near genes chr3L_4_9535001 chr3L_9535001 RAL-373_125b 1762 chr3L 9533736 9533783 chr3L 9541311 9541378 412 11 7592 8.0 7.0 7.5 1.3 7642 chr3L 9533736 intergenic not near genes chr3L 9537557 intergenic not near genes chr3L 9541378 intergenic not near genes chr3L_11_9535001 chr3L_9535001 RAL-373_125b 1763 chr3L 9546658 9546670 chr3L 9546808 9546830 6 156 0.0 14.5 7.2 0.7 172 chr3L 9546658 intergenic not near genes chr3L 9546744 intergenic CG42673 + chr3L 9546830 intergenic CG42673 + chr3L_6_9545001 chr3L_9545001 RAL-373_125b 1764 chr3L 9575891 9575944 chr3L 9581012 9581052 jockey 13 5121 5.5 12.0 8.8 1.3 5161 chr3L 9575891 intron CG42673 + chr3L 9578472 intron CG42673 + chr3L 9581052 intron CG42673 + chr3L_13_9575001 chr3L_9575001 RAL-373_125b 1765 chr3L 9676135 9676207 chr3L 9676275 9676353 13 137 8.0 0.0 4.0 2.6 218 chr3L 9676135 intron fry - chr3L 9676244 intron fry - chr3L 9676353 intron fry - chr3L_13_9675001 chr3L_9675001 RAL-373_125b 1766 chr3L 9732376 9732446 chr3L 9732504 9732574 25 126 5.0 5.0 5.0 4.2 198 chr3L 9732376 exon CG6749 - chr3L 9732475 intron CG6749 - chr3L 9732574 intron CG6749 - chr3L_25_9730001 chr3L_9730001 RAL-373_125b 1767 chr3L 9750618 9750650 chr3L 9750735 9750749 11 121 2.0 0.5 1.2 5.0 131 chr3L 9750618 intron CG42268 - chr3L 9750684 intron CG42268 - chr3L 9750749 intron CG42268 - chr3L_11_9750001 chr3L_9750001 RAL-373_125b 1768 chr3L 9812884 9812937 chr3L 9813046 9813092 7 161 2.0 0.5 1.2 3.2 208 chr3L 9812884 intergenic not near genes chr3L 9812988 intergenic not near genes chr3L 9813092 intergenic not near genes chr3L_7_9810001 chr3L_9810001 RAL-373_125b 1769 chr3L 9824111 9824172 chr3L 9824230 9824309 9 129 3.5 0.0 1.8 3.2 198 chr3L 9824111 intron CG43897 + chr3L 9824210 intron CG43897 + chr3L 9824309 intron CG43897 + chr3L_9_9820001 chr3L_9820001 RAL-373_125b 1770 chr3L 9829005 9829079 chr3L 9829136 9829198 23 128 2.0 6.5 4.2 4.4 193 chr3L 9829005 intron CG43897 + chr3L 9829102 intron CG43897 + chr3L 9829198 intron CG43897 + chr3L_23_9825001 chr3L_9825001 RAL-373_125b 1771 chr3L 9924914 9924939 chr3L 9925049 9925074 5 134 7.0 6.0 6.5 0.7 160 chr3L 9924914 intron CG34356 + chr3L 9924994 intron CG34356 + chr3L 9925074 intron CG34356 + chr3L_5_9920001 chr3L_9920001 RAL-373_125b 1772 chr3L 9926565 9926586 chr3L 9926692 9926713 5 127 4.0 6.0 5.0 0.8 148 chr3L 9926565 intron CG34356 + chr3L 9926639 intron CG34356 + chr3L 9926713 intron CG34356 + chr3L_5_9925001 chr3L_9925001 RAL-373_125b 1773 chr3L 9929631 9929695 chr3L 9938454 9938510 roo 13 8824 4.5 1.5 3.0 3.2 8879 chr3L 9929631 intron CG34356 + chr3L 9934070 intron CG34356 + chr3L 9938510 intron CG34356 + chr3L_13_9930001 chr3L_9930001 RAL-373_125b 1774 chr3L 9980221 9980240 chr3L 9980361 9980380 7 138 11.0 7.0 9.0 0.7 159 chr3L 9980221 intron dpr6 + chr3L 9980300 intron dpr6 + chr3L 9980380 intron dpr6 + chr3L_7_9980001 chr3L_9980001 RAL-373_125b 1775 chr3L 9980243 9980292 chr3L 9980354 9980382 15 121 5.5 5.0 5.2 2.4 139 chr3L 9980243 intron dpr6 + chr3L 9980312 intron dpr6 + chr3L 9980382 intron dpr6 + chr3L_15_9980001 chr3L_9980001 RAL-373_125b 1776 chr3L 9990456 9990525 chr3L 9990603 9990674 19 147 4.0 5.5 4.8 3.3 218 chr3L 9990456 intron dpr6 + chr3L 9990565 intron dpr6 + chr3L 9990674 intron dpr6 + chr3L_19_9990001 chr3L_9990001 RAL-373_125b 1777 chr3L 10003106 10003175 chr3L 10003253 10003322 17 145 3.0 7.0 5.0 2.8 216 chr3L 10003106 intron dpr6 + chr3L 10003214 intron dpr6 + chr3L 10003322 intron dpr6 + chr3L_17_10000001 chr3L_10000001 RAL-373_125b 1778 chr3L 10004056 10004111 chr3L 10004176 10004231 13 123 2.0 5.0 3.5 2.9 175 chr3L 10004056 exon dpr6 + chr3L 10004144 intron dpr6 + chr3L 10004231 intron dpr6 + chr3L_13_10000001 chr3L_10000001 RAL-373_125b 1779 chr3L 10032554 10032561 chr3L 10032691 10032698 4 137 0.0 9.5 4.8 0.7 144 chr3L 10032554 intron dpr6 + chr3L 10032626 intron dpr6 + chr3L 10032698 intron dpr6 + chr3L_4_10030001 chr3L_10030001 RAL-373_125b 1780 chr3L 10052855 10052915 chr3L 10053003 10053052 14 144 13.0 4.0 8.5 1.5 197 chr3L 10052855 intron dpr6 + chr3L 10052954 intron dpr6 + chr3L 10053052 intron dpr6 + chr3L_14_10050001 chr3L_10050001 RAL-373_125b 1781 chr3L 10060081 10060113 chr3L 10067705 10067742 17.6 10 7628 16.5 5.0 10.8 0.8 7661 chr3L 10060081 intron dpr6 + chr3L 10063912 intron dpr6 + chr3L 10067742 intron dpr6 + chr3L_10_10060001 chr3L_10060001 RAL-373_125b 1782 chr3L 10099040 10099115 chr3L 10099175 10099245 22 132 5.0 3.5 4.2 4.2 205 chr3L 10099040 intron dpr6 + chr3L 10099142 intron dpr6 + chr3L 10099245 intron dpr6 + chr3L_22_10095001 chr3L_10095001 RAL-373_125b 1783 chr3L 10161426 10161460 chr3L 10161542 10161579 8 123 0.5 9.0 4.8 1.4 153 chr3L 10161426 intron dpr10 - chr3L 10161502 intron dpr10 - chr3L 10161579 intron dpr10 - chr3L_8_10160001 chr3L_10160001 RAL-373_125b 1784 chr3L 10229589 10229647 chr3L 10229739 10229798 12 154 7.5 3.0 5.2 1.9 209 chr3L 10229589 intergenic not near genes chr3L 10229694 intergenic not near genes chr3L 10229798 intergenic not near genes chr3L_12_10225001 chr3L_10225001 RAL-373_125b 1785 chr3L 10250314 10250323 chr3L 10250450 10250454 6 137 0.0 7.0 3.5 1.3 140 chr3L 10250314 intergenic not near genes chr3L 10250384 intergenic not near genes chr3L 10250454 intergenic not near genes chr3L_6_10250001 chr3L_10250001 RAL-373_125b 1786 chr3L 10250330 10250348 chr3L 10250447 10250489 4 132 0.0 6.5 3.2 1.0 159 chr3L 10250330 intergenic not near genes chr3L 10250410 intergenic not near genes chr3L 10250489 intergenic not near genes chr3L_4_10250001 chr3L_10250001 RAL-373_125b 1787 chr3L 10298633 10298692 chr3L 10298755 10298829 12 134 0.0 2.5 1.2 5.5 196 chr3L 10298633 intergenic not near genes chr3L 10298731 intergenic not near genes chr3L 10298829 intergenic not near genes chr3L_12_10295001 chr3L_10295001 RAL-373_125b 1788 chr3L 10300003 10300072 chr3L 10300145 10300214 10 138 1.0 2.5 1.8 3.6 211 chr3L 10300003 intergenic not near genes chr3L 10300108 intergenic not near genes chr3L 10300214 intergenic not near genes chr3L_10_10300001 chr3L_10300001 RAL-373_125b 1789 chr3L 10308702 10308708 chr3L 10308829 10308835 5 127 2.0 7.5 4.8 0.9 133 chr3L 10308702 intergenic not near genes chr3L 10308768 intergenic not near genes chr3L 10308835 intergenic not near genes chr3L_5_10305001 chr3L_10305001 RAL-373_125b 1790 chr3L 10308714 10308757 chr3L 10308822 10308884 12 120 2.0 6.5 4.2 2.3 170 chr3L 10308714 intergenic not near genes chr3L 10308799 intergenic not near genes chr3L 10308884 intergenic not near genes chr3L_12_10305001 chr3L_10305001 RAL-373_125b 1791 chr3L 10314081 10314154 chr3L 10314217 10314289 15 132 4.5 6.0 5.2 2.4 208 chr3L 10314081 intergenic not near genes chr3L 10314185 intergenic not near genes chr3L 10314289 intergenic not near genes chr3L_15_10310001 chr3L_10310001 RAL-373_125b 1792 chr3L 10314440 10314503 chr3L 10314569 10314633 12 128 3.0 5.5 4.2 2.3 193 chr3L 10314440 intergenic not near genes chr3L 10314536 intergenic not near genes chr3L 10314633 intergenic not near genes chr3L_12_10310001 chr3L_10310001 RAL-373_125b 1793 chr3L 10414906 10414935 chr3L 10417328 10417342 Doc 11 2417 10.5 8.0 9.2 1.1 2436 chr3L 10414906 intergenic CG12362 + chr3L 10416124 intergenic not near genes chr3L 10417342 intergenic not near genes chr3L_11_10415001 chr3L_10415001 RAL-373_125b 1794 chr3L 10414936 10414966 chr3L 10417323 10417388 Doc 11 2416 5.5 7.5 6.5 1.5 2452 chr3L 10414936 intergenic CG12362 + chr3L 10416162 intergenic not near genes chr3L 10417388 intergenic not near genes chr3L_11_10415001 chr3L_10415001 RAL-373_125b 1795 chr3L 10417540 10417605 chr3L 10417656 10417686 18 112 7.0 11.5 9.2 1.8 146 chr3L 10417540 intergenic not near genes chr3L 10417613 intergenic not near genes chr3L 10417686 intergenic not near genes chr3L_18_10415001 chr3L_10415001 RAL-373_125b 1796 chr3L 10450630 10450706 chr3L 10450777 10450836 12 132 0.0 4.5 2.2 3.8 206 chr3L 10450630 intergenic not near genes chr3L 10450733 intergenic not near genes chr3L 10450836 intergenic not near genes chr3L_12_10450001 chr3L_10450001 RAL-373_125b 1797 chr3L 10479425 10479490 chr3L 10479555 10479625 6 130 3.0 0.5 1.8 2.1 200 chr3L 10479425 intergenic not near genes chr3L 10479525 intergenic not near genes chr3L 10479625 intergenic not near genes chr3L_6_10475001 chr3L_10475001 RAL-373_125b 1798 chr3L 10514264 10514337 chr3L 10514394 10514461 8 129 1.0 6.5 3.8 1.7 197 chr3L 10514264 intron A2bp1 + chr3L 10514362 intron A2bp1 + chr3L 10514461 intron A2bp1 + chr3L_8_10510001 chr3L_10510001 RAL-373_125b 1799 chr3L 10551418 10551486 chr3L 10551555 10551623 18 136 8.0 2.0 5.0 3.0 205 chr3L 10551418 intron A2bp1 + chr3L 10551520 intron A2bp1 + chr3L 10551623 intron A2bp1 + chr3L_18_10550001 chr3L_10550001 RAL-373_125b 1800 chr3L 10584232 10584300 chr3L 10584369 10584432 21 137 3.0 5.0 4.0 4.2 200 chr3L 10584232 intron A2bp1 + chr3L 10584332 intron A2bp1 + chr3L 10584432 intron A2bp1 + chr3L_21_10580001 chr3L_10580001 RAL-373_125b 1801 chr3L 10600420 10600476 chr3L 10600537 10600608 9 127 3.0 2.0 2.5 2.6 188 chr3L 10600420 intergenic not near genes chr3L 10600514 intergenic not near genes chr3L 10600608 intergenic not near genes chr3L_9_10600001 chr3L_10600001 RAL-373_125b 1802 chr3L 10614739 10614788 chr3L 10614876 10614917 4 134 0.0 5.0 2.5 1.1 178 chr3L 10614739 intergenic not near genes chr3L 10614828 intergenic not near genes chr3L 10614917 intergenic not near genes chr3L_4_10610001 chr3L_10610001 RAL-373_125b 1803 chr3L 10615218 10615284 chr3L 10615476 10615530 17 255 5.5 2.0 3.8 3.5 312 chr3L 10615218 intergenic not near genes chr3L 10615374 intergenic not near genes chr3L 10615530 intergenic not near genes chr3L_17_10615001 chr3L_10615001 RAL-373_125b 1804 chr3L 10621820 10621850 chr3L 10621957 10621957 6 129 1.0 4.5 2.8 1.6 137 chr3L 10621820 intergenic not near genes chr3L 10621888 intergenic not near genes chr3L 10621957 intergenic not near genes chr3L_6_10620001 chr3L_10620001 RAL-373_125b 1805 chr3L 10653302 10653358 chr3L 10653432 10653493 19 131 2.0 2.5 2.2 5.9 191 chr3L 10653302 intron CG32066 - chr3L 10653398 intron CG32066 - chr3L 10653493 intron CG32066 - chr3L_19_10650001 chr3L_10650001 RAL-373_125b 1806 chr3L 10654091 10654154 chr3L 10654213 10654235 12 120 5.0 2.5 3.8 2.5 144 chr3L 10654091 intron CG32066 - chr3L 10654163 intron CG32066 - chr3L 10654235 intron CG32066 - chr3L_12_10650001 chr3L_10650001 RAL-373_125b 1807 chr3L 10654940 10654998 chr3L 10655057 10655128 12 124 5.0 4.5 4.8 2.1 188 chr3L 10654940 intron CG32066 - chr3L 10655034 intron CG32066 - chr3L 10655128 intron CG32066 - chr3L_12_10655001 chr3L_10655001 RAL-373_125b 1808 chr3L 10696341 10696399 chr3L 10696475 10696532 10 132 3.0 6.5 4.8 1.7 191 chr3L 10696341 intron NijA - chr3L 10696436 intron NijA - chr3L 10696532 intron NijA - chr3L_10_10695001 chr3L_10695001 RAL-373_125b 1809 chr3L 10721957 10721986 chr3L 10722089 10722107 6 128 4.5 0.0 2.2 1.9 150 chr3L 10721957 intergenic not near genes chr3L 10722032 intergenic not near genes chr3L 10722107 intergenic not near genes chr3L_6_10720001 chr3L_10720001 RAL-373_125b 1810 chr3L 10735783 10735831 chr3L 10735922 10735970 8 138 8.0 7.0 7.5 0.9 187 chr3L 10735783 intergenic not near genes chr3L 10735876 intergenic not near genes chr3L 10735970 intergenic not near genes chr3L_8_10735001 chr3L_10735001 RAL-373_125b 1811 chr3L 10762801 10762853 chr3L 10762924 10762956 7 121 6.0 6.0 6.0 1.0 155 chr3L 10762801 intergenic not near genes chr3L 10762878 intergenic not near genes chr3L 10762956 intergenic not near genes chr3L_7_10760001 chr3L_10760001 RAL-373_125b 1812 chr3L 10764098 10764144 chr3L 10764213 10764273 18 122 8.0 7.0 7.5 2.1 175 chr3L 10764098 intergenic not near genes chr3L 10764186 intergenic not near genes chr3L 10764273 intergenic not near genes chr3L_18_10760001 chr3L_10760001 RAL-373_125b 1813 chr3L 10820510 10820524 chr3L 10820663 10820692 5 184 0.0 0.0 0.0 5.0 182 chr3L 10820510 intergenic not near genes chr3L 10820601 intergenic not near genes chr3L 10820692 intergenic not near genes chr3L_5_10820001 chr3L_10820001 RAL-373_125b 1814 chr3L 10918702 10918744 chr3L 10918831 10918888 12 130 3.0 6.5 4.8 2.1 186 chr3L 10918702 intergenic not near genes chr3L 10918795 intergenic not near genes chr3L 10918888 intergenic not near genes chr3L_12_10915001 chr3L_10915001 RAL-373_125b 1815 chr3L 10968663 10968713 chr3L 10968795 10968846 8 132 10.0 0.0 5.0 1.3 183 chr3L 10968663 intergenic not near genes chr3L 10968754 intergenic not near genes chr3L 10968846 intergenic not near genes chr3L_8_10965001 chr3L_10965001 RAL-373_125b 1816 chr3L 11042069 11042135 chr3L 11042258 11042324 11 187 8.0 0.0 4.0 2.2 255 chr3L 11042069 intron CG43693 - chr3L 11042196 intron CG43693 - chr3L 11042324 intron CG43693 - chr3L_11_11040001 chr3L_11040001 RAL-373_125b 1817 chr3L 11087016 11087081 chr3L 11088847 11088920 S-element 10 1836 4.5 2.5 3.5 2.2 1904 chr3L 11087016 intron JIL-1 - chr3L 11087968 intron JIL-1 - chr3L 11088920 intron JIL-1 - chr3L_10_11085001 chr3L_11085001 RAL-373_125b 1818 chr3L 11104028 11104112 chr3L 11104156 11104237 5 130 1.5 0.0 0.8 2.8 209 chr3L 11104028 intergenic CG32071 - chr3L 11104132 intergenic CG32071 - chr3L 11104237 intergenic CG32071 - chr3L_5_11100001 chr3L_11100001 RAL-373_125b 1819 chr3L 11105038 11105076 chr3L 11105170 11105208 11 132 4.5 3.5 4.0 2.2 170 chr3L 11105038 intergenic not near genes chr3L 11105123 intergenic not near genes chr3L 11105208 intergenic not near genes chr3L_11_11105001 chr3L_11105001 RAL-373_125b 1820 chr3L 11105247 11105311 chr3L 11107008 11107067 X-element 19 1760 4.0 5.5 4.8 3.3 1820 chr3L 11105247 intergenic not near genes chr3L 11106157 intergenic not near genes chr3L 11107067 exon CG32073 - chr3L_19_11105001 chr3L_11105001 RAL-373_125b 1821 chr3L 11113945 11113971 chr3L 11114072 11114092 9 126 12.5 0.0 6.2 1.2 147 chr3L 11113945 intergenic Sod -,fd68A - chr3L 11114018 intergenic fd68A -,Sod - chr3L 11114092 intergenic fd68A -,Sod - chr3L_9_11110001 chr3L_11110001 RAL-373_125b 1822 chr3L 11141410 11141462 chr3L 11141555 11141607 12 144 4.5 6.0 5.2 1.9 197 chr3L 11141410 intron CG32082 + chr3L 11141508 intron CG32082 + chr3L 11141607 intron CG32082 + chr3L_12_11140001 chr3L_11140001 RAL-373_125b 1823 chr3L 11148995 11149064 chr3L 11149130 11149199 11 133 2.5 6.0 4.2 2.1 204 chr3L 11148995 intron CG32082 + chr3L 11149097 intron CG32082 + chr3L 11149199 intron CG32082 + chr3L_11_11145001 chr3L_11145001 RAL-373_125b 1824 chr3L 11149324 11149397 chr3L 11149495 11149567 18 168 5.5 5.5 5.5 2.8 243 chr3L 11149324 intron CG32082 + chr3L 11149446 intron CG32082 + chr3L 11149567 intron CG32082 + chr3L_18_11145001 chr3L_11145001 RAL-373_125b 1825 chr3L 11180635 11180652 chr3L 11180793 11180810 5 158 2.5 10.5 6.5 0.7 175 chr3L 11180635 intron GlcAT-P - chr3L 11180722 intron GlcAT-P - chr3L 11180810 intron GlcAT-P - chr3L_5_11180001 chr3L_11180001 RAL-373_125b 1826 chr3L 11189044 11189106 chr3L 11189215 11189285 7 173 7.0 0.0 3.5 1.6 241 chr3L 11189044 intron GlcAT-P - chr3L 11189164 intron GlcAT-P - chr3L 11189285 intron GlcAT-P - chr3L_7_11185001 chr3L_11185001 RAL-373_125b 1827 chr3L 11241731 11241793 chr3L 11241863 11241925 13 132 4.5 2.0 3.2 3.1 194 chr3L 11241731 intergenic not near genes chr3L 11241828 intergenic not near genes chr3L 11241925 intergenic not near genes chr3L_13_11240001 chr3L_11240001 RAL-373_125b 1828 chr3L 11264430 11264486 chr3L 11271421 11271483 17.6 16 6999 6.0 5.0 5.5 2.5 7053 chr3L 11264430 intergenic not near genes chr3L 11267956 intergenic not near genes chr3L 11271483 intergenic not near genes chr3L_16_11265001 chr3L_11265001 RAL-373_125b 1829 chr3L 11329652 11329721 chr3L 11332902 11332954 jockey 11 3246 8.5 5.5 7.0 1.4 3302 chr3L 11329652 intergenic not near genes chr3L 11331303 intergenic not near genes chr3L 11332954 intergenic not near genes chr3L_11_11330001 chr3L_11330001 RAL-373_125b 1830 chr3L 11435515 11435532 chr3L 11435734 11435741 8 216 14.0 4.5 9.2 0.8 226 chr3L 11435515 intergenic CG6149 -,CR44548 + chr3L 11435628 intergenic CR44548 +,CG6149 - chr3L 11435741 5` UTR CR44548 + chr3L_8_11435001 chr3L_11435001 RAL-373_125b 1831 chr3L 11435534 11435586 chr3L 11435733 11435784 20 214 6.0 4.5 5.2 3.2 250 chr3L 11435534 intergenic CG6149 -,CR44548 + chr3L 11435659 5` UTR CR44548 + chr3L 11435784 5` UTR CR44548 + chr3L_20_11435001 chr3L_11435001 RAL-373_125b 1832 chr3L 11441353 11441372 chr3L 11441477 11441496 5 126 0.0 4.0 2.0 1.7 143 chr3L 11441353 intergenic not near genes chr3L 11441424 intergenic not near genes chr3L 11441496 intergenic not near genes chr3L_5_11440001 chr3L_11440001 RAL-373_125b 1833 chr3L 11442747 11442794 chr3L 11442879 11442896 4 118 3.5 0.0 1.8 1.4 149 chr3L 11442747 intergenic not near genes chr3L 11442822 intergenic not near genes chr3L 11442896 intergenic not near genes chr3L_4_11440001 chr3L_11440001 RAL-373_125b 1834 chr3L 11445024 11445028 chr3L 11445151 11445155 6 127 4.0 6.5 5.2 1.0 131 chr3L 11445024 3` UTR CR44549 - chr3L 11445090 3` UTR CR44549 - chr3L 11445155 intergenic CG7557 +,CR44549 - chr3L_6_11445001 chr3L_11445001 RAL-373_125b 1835 chr3L 11445032 11445059 chr3L 11445143 11445180 7 122 2.0 6.0 4.0 1.4 148 chr3L 11445032 3` UTR CR44549 - chr3L 11445106 intergenic CR44549 -,CG7557 + chr3L 11445180 5` UTR CG7557 + chr3L_7_11445001 chr3L_11445001 RAL-373_125b 1836 chr3L 11456859 11456887 chr3L 11457007 11457035 10 145 9.0 3.0 6.0 1.4 176 chr3L 11456859 intergenic CG12289 - chr3L 11456947 intergenic CG12289 - chr3L 11457035 intergenic CG12289 - chr3L_10_11455001 chr3L_11455001 RAL-373_125b 1837 chr3L 11534969 11535027 chr3L 11535097 11535156 14 128 7.0 0.0 3.5 3.1 187 chr3L 11534969 intron Mob2 - chr3L 11535062 intron Mob2 - chr3L 11535156 intron Mob2 - chr3L_14_11535001 chr3L_11535001 RAL-373_125b 1838 chr3L 11579510 11579585 chr3L 11579666 11579716 17 153 6.5 3.0 4.8 2.9 206 chr3L 11579510 intergenic CG43390 - chr3L 11579613 intergenic CG43390 - chr3L 11579716 intergenic CG43390 - chr3L_17_11575001 chr3L_11575001 RAL-373_125b 1839 chr3L 11587870 11587949 chr3L 11587996 11588070 12 123 4.5 3.0 3.8 2.5 200 chr3L 11587870 intergenic rt - chr3L 11587970 intergenic rt - chr3L 11588070 intergenic rt - chr3L_12_11585001 chr3L_11585001 RAL-373_125b 1840 chr3L 11590223 11590269 chr3L 11590363 11590409 5 140 1.0 5.0 3.0 1.2 186 chr3L 11590223 intergenic CG7377 + chr3L 11590316 intergenic CG7377 + chr3L 11590409 intergenic CG7377 +,CG33268 - chr3L_5_11590001 chr3L_11590001 RAL-373_125b 1841 chr3L 11590710 11590771 chr3L 11590842 11590872 21 129 6.5 10.0 8.2 2.3 162 chr3L 11590710 intergenic CG33268 - chr3L 11590791 intergenic CG33268 - chr3L 11590872 3` UTR CG33268 - chr3L_21_11590001 chr3L_11590001 RAL-373_125b 1842 chr3L 11598576 11598647 chr3L 11598745 11598816 17 164 5.0 5.5 5.2 2.7 240 chr3L 11598576 intron CG7368 + chr3L 11598696 intron CG7368 + chr3L 11598816 intron CG7368 + chr3L_17_11595001 chr3L_11595001 RAL-373_125b 1843 chr3L 11600753 11600815 chr3L 11600911 11600972 10 156 0.0 3.0 1.5 4.0 219 chr3L 11600753 intron CG7368 + chr3L 11600862 intron CG7368 + chr3L 11600972 intron CG7368 + chr3L_10_11600001 chr3L_11600001 RAL-373_125b 1844 chr3L 11663707 11663751 chr3L 11663877 11663916 9 171 7.5 0.0 3.8 1.9 209 chr3L 11663707 intron CG32085 - chr3L 11663812 intron CG32085 - chr3L 11663916 intron CG32085 - chr3L_9_11660001 chr3L_11660001 RAL-373_125b 1845 chr3L 11689363 11689427 chr3L 11689524 11689565 23 155 10.0 6.0 8.0 2.6 202 chr3L 11689363 3` UTR Sug + chr3L 11689464 3` UTR Sug + chr3L 11689565 3` UTR Sug + chr3L_23_11685001 chr3L_11685001 RAL-373_125b 1846 chr3L 11711695 11711727 chr3L 11711839 11711864 7 140 4.0 4.0 4.0 1.4 169 chr3L 11711695 intergenic crim - chr3L 11711780 intergenic crim -,CG14132 - chr3L 11711864 intergenic CG14132 -,crim - chr3L_7_11710001 chr3L_11710001 RAL-373_125b 1847 chr3L 11723049 11723110 chr3L 11727894 11727950 Doc 15 4844 5.5 8.5 7.0 1.9 4901 chr3L 11723049 3` UTR Bmcp + chr3L 11725500 intron Bmcp + chr3L 11727950 3` UTR Bmcp + chr3L_15_11725001 chr3L_11725001 RAL-373_125b 1848 chr3L 11743979 11744046 chr3L 11744132 11744204 13 153 5.5 2.5 4.0 2.6 225 chr3L 11743979 exon CG6024 - chr3L 11744092 intron CG6024 - chr3L 11744204 intron CG6024 - chr3L_13_11740001 chr3L_11740001 RAL-373_125b 1849 chr3L 11828747 11828748 chr3L 11828867 11828876 4 124 1.5 13.5 7.5 0.5 129 chr3L 11828747 intron CycA - chr3L 11828812 intron CycA - chr3L 11828876 intron CycA - chr3L_4_11825001 chr3L_11825001 RAL-373_125b 1850 chr3L 11849293 11849337 chr3L 11849432 11849487 9 147 5.5 3.5 4.5 1.6 194 chr3L 11849293 intergenic not near genes chr3L 11849390 intergenic not near genes chr3L 11849487 intergenic not near genes chr3L_9_11845001 chr3L_11845001 RAL-373_125b 1851 chr3L 11864524 11864583 chr3L 11865847 11865912 pogo 16 1339 8.0 4.5 6.2 2.2 1388 chr3L 11864524 intron CG44837 - chr3L 11865218 intron CG44837 - chr3L 11865912 intron CG44837 - chr3L_16_11865001 chr3L_11865001 RAL-373_125b 1852 chr3L 11872224 11872268 chr3L 11872343 11872415 20 132 1.5 4.0 2.8 5.3 191 chr3L 11872224 intron CG44837 - chr3L 11872320 intron CG44837 - chr3L 11872415 intron CG44837 - chr3L_20_11870001 chr3L_11870001 RAL-373_125b 1853 chr3L 11887210 11887262 chr3L 11887357 11887404 8 146 5.0 0.0 2.5 2.3 194 chr3L 11887210 intron CG44837 - chr3L 11887307 intron,3` UTR CG44837 -,CG5897 - chr3L 11887404 intron,3` UTR CG44837 -,CG5897 - chr3L_8_11885001 chr3L_11885001 RAL-373_125b 1854 chr3L 11905071 11905077 chr3L 11905203 11905209 4 132 4.5 7.5 6.0 0.6 138 chr3L 11905071 intron CG44837 - chr3L 11905140 intron CG44837 - chr3L 11905209 intron CG44837 - chr3L_4_11905001 chr3L_11905001 RAL-373_125b 1855 chr3L 11905111 11905120 chr3L 11905243 11905247 6 131 4.5 13.0 8.8 0.6 136 chr3L 11905111 intron CG44837 - chr3L 11905179 intron CG44837 - chr3L 11905247 intron CG44837 - chr3L_6_11905001 chr3L_11905001 RAL-373_125b 1856 chr3L 11905121 11905142 chr3L 11905241 11905272 4 126 3.0 13.0 8.0 0.4 151 chr3L 11905121 intron CG44837 - chr3L 11905196 intron CG44837 - chr3L 11905272 intron CG44837 - chr3L_4_11905001 chr3L_11905001 RAL-373_125b 1857 chr3L 11974295 11974362 chr3L 11974420 11974492 14 129 3.5 5.0 4.2 2.7 197 chr3L 11974295 intergenic not near genes chr3L 11974394 intergenic not near genes chr3L 11974492 intergenic CG14125 + chr3L_14_11970001 chr3L_11970001 RAL-373_125b 1858 chr3L 11984526 11984600 chr3L 11984665 11984739 13 140 5.5 3.0 4.2 2.5 213 chr3L 11984526 intergenic CG6938 + chr3L 11984632 intergenic CG6938 + chr3L 11984739 intergenic CG6938 + chr3L_13_11980001 chr3L_11980001 RAL-373_125b 1859 chr3L 12013870 12013937 chr3L 12014004 12014073 17 135 3.0 7.0 5.0 2.8 203 chr3L 12013870 intron rols - chr3L 12013972 intron rols - chr3L 12014073 intron rols - chr3L_17_12010001 chr3L_12010001 RAL-373_125b 1860 chr3L 12019274 12019332 chr3L 12019436 12019494 9 163 7.5 4.0 5.8 1.3 220 chr3L 12019274 intron rols - chr3L 12019384 intron rols - chr3L 12019494 intron rols - chr3L_9_12015001 chr3L_12015001 RAL-373_125b 1861 chr3L 12062025 12062070 chr3L 12063875 12063945 15 1861 41.5 39.5 40.5 0.4 1920 chr3L 12062025 intron rols - chr3L 12062985 intron rols - chr3L 12063945 intron rols - chr3L_15_12060001 chr3L_12060001 RAL-373_125b 1862 chr3L 12083924 12083985 chr3L 12084057 12084122 10 138 33.0 31.5 32.2 0.3 198 chr3L 12083924 intergenic not near genes chr3L 12084023 intergenic not near genes chr3L 12084122 intergenic not near genes chr3L_10_12080001 chr3L_12080001 RAL-373_125b 1863 chr3L 12089033 12089105 chr3L 12089163 12089235 21 127 5.0 3.0 4.0 4.2 202 chr3L 12089033 exon CG17154 + chr3L 12089134 3` UTR CG17154 + chr3L 12089235 intergenic CG17154 + chr3L_21_12085001 chr3L_12085001 RAL-373_125b 1864 chr3L 12104347 12104395 chr3L 12104479 12104527 16 130 2.0 3.5 2.8 4.2 180 chr3L 12104347 intergenic not near genes chr3L 12104437 intergenic not near genes chr3L 12104527 intergenic not near genes chr3L_16_12100001 chr3L_12100001 RAL-373_125b 1865 chr3L 12290213 12290231 chr3L 12290353 12290366 5 139 3.0 3.5 3.2 1.2 153 chr3L 12290213 intergenic CR45658 - chr3L 12290290 intergenic CR45658 - chr3L 12290366 intergenic CR45658 - chr3L_5_12290001 chr3L_12290001 RAL-373_125b 1866 chr3L 12304042 12304118 chr3L 12304168 12304227 12 120 5.0 4.0 4.5 2.2 185 chr3L 12304042 intergenic not near genes chr3L 12304134 intergenic not near genes chr3L 12304227 intergenic not near genes chr3L_12_12300001 chr3L_12300001 RAL-373_125b 1867 chr3L 12353886 12353952 chr3L 12354010 12354070 8 133 2.5 6.0 4.2 1.5 184 chr3L 12353886 intergenic not near genes chr3L 12353978 intergenic not near genes chr3L 12354070 intergenic not near genes chr3L_8_12350001 chr3L_12350001 RAL-373_125b 1868 chr3L 12371048 12371067 chr3L 12371197 12371209 5 148 12.5 0.0 6.2 0.7 161 chr3L 12371048 intron Ncc69 - chr3L 12371128 intron Ncc69 - chr3L 12371209 intron Ncc69 - chr3L_5_12370001 chr3L_12370001 RAL-373_125b 1869 chr3L 12381545 12381552 chr3L 12381673 12381677 6 128 1.0 10.5 5.8 0.9 132 chr3L 12381545 intron Ncc69 - chr3L 12381611 intron Ncc69 - chr3L 12381677 intron Ncc69 - chr3L_6_12380001 chr3L_12380001 RAL-373_125b 1870 chr3L 12446223 12446264 chr3L 12446351 12446382 7 115 9.5 1.0 5.2 1.1 159 chr3L 12446223 intergenic not near genes chr3L 12446302 intergenic not near genes chr3L 12446382 intergenic not near genes chr3L_7_12445001 chr3L_12445001 RAL-373_125b 1871 chr3L 12446268 12446293 chr3L 12446349 12446414 6 92 6.0 1.0 3.5 1.3 146 chr3L 12446268 intergenic not near genes chr3L 12446341 intergenic not near genes chr3L 12446414 intergenic not near genes chr3L_6_12445001 chr3L_12445001 RAL-373_125b 1872 chr3L 12467206 12467283 chr3L 12467338 12467402 12 130 0.0 2.0 1.0 6.0 196 chr3L 12467206 intron eyg - chr3L 12467304 intron eyg - chr3L 12467402 intron eyg - chr3L_12_12465001 chr3L_12465001 RAL-373_125b 1873 chr3L 12491680 12491734 chr3L 12491813 12491867 5 129 0.0 10.0 5.0 0.8 187 chr3L 12491680 intergenic CG10657 -,CR45682 +,CR45681 + chr3L 12491774 intergenic CG10657 -,CR45682 + chr3L 12491867 3` UTR,5` UTR CG10657 -,CR45682 + chr3L_5_12490001 chr3L_12490001 RAL-373_125b 1874 chr3L 12555577 12555650 chr3L 12555721 12555794 21 139 6.5 5.5 6.0 3.0 217 chr3L 12555577 intron sowah - chr3L 12555686 intron sowah - chr3L 12555794 intron sowah - chr3L_21_12555001 chr3L_12555001 RAL-373_125b 1875 chr3L 12591596 12591634 chr3L 12591714 12591749 15 116 4.0 10.0 7.0 1.9 153 chr3L 12591596 intron ara + chr3L 12591672 intron ara + chr3L 12591749 intron ara + chr3L_15_12590001 chr3L_12590001 RAL-373_125b 1876 chr3L 12610955 12611022 chr3L 12611246 12611318 13 295 0.0 6.0 3.0 3.2 363 chr3L 12610955 intron caup + chr3L 12611136 intron caup + chr3L 12611318 intron caup + chr3L_13_12610001 chr3L_12610001 RAL-373_125b 1877 chr3L 12614559 12614594 chr3L 12614747 12614782 10 188 0.0 6.0 3.0 2.5 223 chr3L 12614559 intron caup + chr3L 12614670 intron caup + chr3L 12614782 intron caup + chr3L_10_12610001 chr3L_12610001 RAL-373_125b 1878 chr3L 12626124 12626164 chr3L 12626282 12626289 12 154 1.5 0.0 0.8 6.7 165 chr3L 12626124 intergenic not near genes chr3L 12626206 intergenic not near genes chr3L 12626289 intergenic not near genes chr3L_12_12625001 chr3L_12625001 RAL-373_125b 1879 chr3L 12647899 12647976 chr3L 12648025 12648086 18 121 5.5 0.5 3.0 4.5 187 chr3L 12647899 5` UTR CR32111 + chr3L 12647992 5` UTR CR32111 + chr3L 12648086 5` UTR CR32111 + chr3L_18_12645001 chr3L_12645001 RAL-373_125b 1880 chr3L 12666891 12666951 chr3L 12667047 12667113 16 161 3.5 6.0 4.8 2.8 222 chr3L 12666891 intergenic not near genes chr3L 12667002 intergenic not near genes chr3L 12667113 intergenic not near genes chr3L_16_12665001 chr3L_12665001 RAL-373_125b 1881 chr3L 12675138 12675146 chr3L 12675253 12675273 8 120 7.5 12.0 9.8 0.7 135 chr3L 12675138 intergenic not near genes chr3L 12675206 intergenic not near genes chr3L 12675273 intergenic not near genes chr3L_8_12675001 chr3L_12675001 RAL-373_125b 1882 chr3L 12722246 12722285 chr3L 12722378 12722412 8 127 0.0 1.5 0.8 4.4 166 chr3L 12722246 intergenic not near genes chr3L 12722329 intergenic not near genes chr3L 12722412 intergenic not near genes chr3L_8_12720001 chr3L_12720001 RAL-373_125b 1883 chr3L 12792088 12792169 chr3L 12792238 12792318 8 149 2.5 5.0 3.8 1.7 230 chr3L 12792088 intron,intron Atg1 -,CG42709 + chr3L 12792203 intron,intron Atg1 -,CG42709 + chr3L 12792318 intron,intron Atg1 -,CG42709 + chr3L_8_12790001 chr3L_12790001 RAL-373_125b 1884 chr3L 12801932 12802007 chr3L 12802058 12802133 19 124 4.0 5.0 4.5 3.5 201 chr3L 12801932 intron Atg1 - chr3L 12802032 intron Atg1 - chr3L 12802133 intron Atg1 - chr3L_19_12800001 chr3L_12800001 RAL-373_125b 1885 chr3L 12857945 12858001 chr3L 12858090 12858146 11 143 3.5 1.5 2.5 3.1 201 chr3L 12857945 3` UTR CG32107 - chr3L 12858046 3` UTR CG32107 - chr3L 12858146 3` UTR CG32107 - chr3L_11_12855001 chr3L_12855001 RAL-373_125b 1886 chr3L 12867988 12868053 chr3L 12868124 12868177 9 131 3.5 8.0 5.8 1.3 189 chr3L 12867988 intergenic not near genes chr3L 12868082 intergenic not near genes chr3L 12868177 intergenic not near genes chr3L_9_12865001 chr3L_12865001 RAL-373_125b 1887 chr3L 12874881 12874928 chr3L 12877223 12877270 jockey 11 2339 8.0 4.5 6.2 1.5 2389 chr3L 12874881 intergenic not near genes chr3L 12876076 intergenic not near genes chr3L 12877270 intergenic not near genes chr3L_11_12875001 chr3L_12875001 RAL-373_125b 1888 chr3L 12892874 12892890 chr3L 12893030 12893046 5 155 8.5 2.5 5.5 0.8 172 chr3L 12892874 intron CG14118 + chr3L 12892960 intron CG14118 + chr3L 12893046 intron CG14118 + chr3L_5_12890001 chr3L_12890001 RAL-373_125b 1889 chr3L 12894758 12894811 chr3L 12894886 12894918 15 123 12.0 9.0 10.5 1.3 160 chr3L 12894758 3` UTR CG14118 + chr3L 12894838 intergenic CG14118 + chr3L 12894918 intergenic CG14118 + chr3L_15_12890001 chr3L_12890001 RAL-373_125b 1890 chr3L 12918960 12919024 chr3L 12924910 12924974 Rt1c 18 5951 5.0 8.5 6.8 2.3 6014 chr3L 12918960 intergenic not near genes chr3L 12921967 intergenic not near genes chr3L 12924974 intergenic not near genes chr3L_18_12920001 chr3L_12920001 RAL-373_125b 1891 chr3L 12926961 12927032 chr3L 12927088 12927159 22 125 2.5 5.0 3.8 4.6 198 chr3L 12926961 intergenic not near genes chr3L 12927060 intergenic not near genes chr3L 12927159 intergenic not near genes chr3L_22_12925001 chr3L_12925001 RAL-373_125b 1892 chr3L 12957747 12957761 chr3L 12962279 12962293 copia 4 4529 13.0 11.0 12.0 0.3 4546 chr3L 12957747 intergenic not near genes chr3L 12960020 intergenic not near genes chr3L 12962293 intergenic not near genes chr3L_4_12960001 chr3L_12960001 RAL-373_125b 1893 chr3L 12957770 12957809 chr3L 12962277 12962332 copia 10 4525 6.5 10.5 8.5 1.1 4562 chr3L 12957770 intergenic not near genes chr3L 12960051 intergenic not near genes chr3L 12962332 intergenic not near genes chr3L_10_12960001 chr3L_12960001 RAL-373_125b 1894 chr3L 13008744 13008822 chr3L 13008953 13009026 19 205 3.0 5.5 4.2 3.7 282 chr3L 13008744 exon CG14117 + chr3L 13008885 intron CG14117 + chr3L 13009026 exon CG14117 + chr3L_19_13005001 chr3L_13005001 RAL-373_125b 1895 chr3L 13050527 13050587 chr3L 13050656 13050711 11 127 6.0 6.0 6.0 1.6 184 chr3L 13050527 intergenic not near genes chr3L 13050619 intergenic not near genes chr3L 13050711 intergenic not near genes chr3L_11_13050001 chr3L_13050001 RAL-373_125b 1896 chr3L 13144077 13144142 chr3L 13144204 13144222 20 122 2.5 6.5 4.5 3.6 145 chr3L 13144077 intergenic not near genes chr3L 13144150 intergenic not near genes chr3L 13144222 intergenic not near genes chr3L_20_13140001 chr3L_13140001 RAL-373_125b 1897 chr3L 13150633 13150679 chr3L 13150753 13150801 10 125 5.5 2.5 4.0 2.0 168 chr3L 13150633 intergenic not near genes chr3L 13150717 intergenic not near genes chr3L 13150801 intergenic not near genes chr3L_10_13150001 chr3L_13150001 RAL-373_125b 1898 chr3L 13162233 13162304 chr3L 13162357 13162431 16 122 5.5 5.0 5.2 2.6 198 chr3L 13162233 intergenic not near genes chr3L 13162332 intergenic not near genes chr3L 13162431 intergenic not near genes chr3L_16_13160001 chr3L_13160001 RAL-373_125b 1899 chr3L 13267248 13267304 chr3L 13267401 13267452 8 158 7.5 6.0 6.8 1.0 204 chr3L 13267248 intron caps + chr3L 13267350 intron caps + chr3L 13267452 intron caps + chr3L_8_13265001 chr3L_13265001 RAL-373_125b 1900 chr3L 13313944 13314001 chr3L 13314120 13314175 13 175 7.0 2.5 4.8 2.2 231 chr3L 13313944 intergenic not near genes chr3L 13314060 intergenic not near genes chr3L 13314175 intergenic not near genes chr3L_13_13310001 chr3L_13310001 RAL-373_125b 1901 chr3L 13338295 13338363 chr3L 13338460 13338532 7 165 2.0 5.0 3.5 1.6 237 chr3L 13338295 intergenic not near genes chr3L 13338414 intergenic not near genes chr3L 13338532 intergenic not near genes chr3L_7_13335001 chr3L_13335001 RAL-373_125b 1902 chr3L 13432257 13432323 chr3L 13432396 13432452 20 141 4.5 5.5 5.0 3.3 195 chr3L 13432257 intron CG10713 - chr3L 13432354 intron CG10713 - chr3L 13432452 intron CG10713 - chr3L_20_13430001 chr3L_13430001 RAL-373_125b 1903 chr3L 13477013 13477035 chr3L 13477140 13477162 7 126 0.5 9.5 5.0 1.2 149 chr3L 13477013 intergenic not near genes chr3L 13477088 intergenic stv + chr3L 13477162 intergenic stv + chr3L_7_13475001 chr3L_13475001 RAL-373_125b 1904 chr3L 13492063 13492096 chr3L 13492189 13492222 9 122 1.0 9.0 5.0 1.5 159 chr3L 13492063 intron Tgi + chr3L 13492142 intron Tgi + chr3L 13492222 intron Tgi + chr3L_9_13490001 chr3L_13490001 RAL-373_125b 1905 chr3L 13492098 13492110 chr3L 13492184 13492226 6 115 2.0 7.5 4.8 1.0 128 chr3L 13492098 intron Tgi + chr3L 13492162 intron Tgi + chr3L 13492226 intron Tgi + chr3L_6_13490001 chr3L_13490001 RAL-373_125b 1906 chr3L 13525109 13525175 chr3L 13532955 13533021 roo 17 7844 10.5 5.5 8.0 1.9 7912 chr3L 13525109 intergenic not near genes chr3L 13529065 intergenic not near genes chr3L 13533021 intergenic not near genes chr3L_17_13525001 chr3L_13525001 RAL-373_125b 1907 chr3L 13561327 13561380 chr3L 13561440 13561508 13 125 7.0 6.0 6.5 1.7 181 chr3L 13561327 intron bru-3 - chr3L 13561418 intron bru-3 - chr3L 13561508 intron bru-3 - chr3L_13_13560001 chr3L_13560001 RAL-373_125b 1908 chr3L 13574584 13574611 chr3L 13580144 13580151 Rt1c 6 5557 9.5 11.0 10.2 0.5 5567 chr3L 13574584 intron bru-3 - chr3L 13577368 intron bru-3 - chr3L 13580151 intron bru-3 - chr3L_6_13575001 chr3L_13575001 RAL-373_125b 1909 chr3L 13582198 13582233 chr3L 13582327 13582365 8 133 4.5 8.0 6.2 1.1 167 chr3L 13582198 intron bru-3 - chr3L 13582282 intron bru-3 - chr3L 13582365 intron bru-3 - chr3L_8_13580001 chr3L_13580001 RAL-373_125b 1910 chr3L 13583941 13583984 chr3L 13584059 13584097 10 124 7.5 5.5 6.5 1.3 156 chr3L 13583941 intron bru-3 - chr3L 13584019 intron bru-3 - chr3L 13584097 intron bru-3 - chr3L_10_13580001 chr3L_13580001 RAL-373_125b 1911 chr3L 13594998 13595040 chr3L 13595113 13595170 22 126 5.0 12.0 8.5 2.3 172 chr3L 13594998 intron bru-3 - chr3L 13595084 intron bru-3 - chr3L 13595170 intron bru-3 - chr3L_22_13595001 chr3L_13595001 RAL-373_125b 1912 chr3L 13669850 13669897 chr3L 13670179 13670241 11 341 4.0 6.0 5.0 1.8 391 chr3L 13669850 intron bru-3 - chr3L 13670046 intron bru-3 - chr3L 13670241 intron bru-3 - chr3L_11_13670001 chr3L_13670001 RAL-373_125b 1913 chr3L 13701531 13701577 chr3L 13701693 13701750 8 172 8.0 5.5 6.8 1.0 219 chr3L 13701531 intron bru-3 - chr3L 13701640 intron bru-3 - chr3L 13701750 intron bru-3 - chr3L_8_13700001 chr3L_13700001 RAL-373_125b 1914 chr3L 13739986 13740049 chr3L 13740127 13740191 11 134 3.0 8.0 5.5 1.7 205 chr3L 13739986 intron bru-3 - chr3L 13740088 intron bru-3 - chr3L 13740191 intron bru-3 - chr3L_11_13740001 chr3L_13740001 RAL-373_125b 1915 chr3L 13752744 13752803 chr3L 13752872 13752902 20 132 6.0 4.0 5.0 3.3 158 chr3L 13752744 intron bru-3 - chr3L 13752823 intron bru-3 - chr3L 13752902 intron bru-3 - chr3L_20_13750001 chr3L_13750001 RAL-373_125b 1916 chr3L 13804495 13804553 chr3L 13822831 13822889 roo 10 18330 8.5 6.0 7.2 1.2 18394 chr3L 13804495 intergenic not near genes chr3L 13813692 intergenic not near genes chr3L 13822889 intergenic not near genes chr3L_10_13810001 chr3L_13810001 RAL-373_125b 1917 chr3L 13884329 13884376 chr3L 13884470 13884517 10 138 11.0 3.5 7.2 1.2 188 chr3L 13884329 intron dysc - chr3L 13884423 intron dysc - chr3L 13884517 intron dysc - chr3L_10_13880001 chr3L_13880001 RAL-373_125b 1918 chr3L 13904810 13904865 chr3L 13904948 13905002 7 138 6.5 0.0 3.2 1.7 192 chr3L 13904810 intergenic not near genes chr3L 13904906 intergenic not near genes chr3L 13905002 intergenic not near genes chr3L_7_13900001 chr3L_13900001 RAL-373_125b 1919 chr3L 13931294 13931371 chr3L 13931439 13931526 11 153 0.5 0.5 0.5 7.3 232 chr3L 13931294 intron Gl + chr3L 13931410 intron Gl + chr3L 13931526 intron Gl + chr3L_11_13930001 chr3L_13930001 RAL-373_125b 1920 chr3L 13936451 13936648 chr3L 13936579 13936833 17 154 0.0 0.0 0.0 17.0 382 chr3L 13936451 intergenic not near genes chr3L 13936642 intergenic not near genes chr3L 13936833 intergenic not near genes chr3L_17_13935001 chr3L_13935001 RAL-373_125b 1921 chr3L 14076025 14076098 chr3L 14076154 14076221 17 128 4.5 0.0 2.2 5.3 196 chr3L 14076025 3` UTR,5` UTR Pex1 +,btl + chr3L 14076123 3` UTR,intron Pex1 +,btl + chr3L 14076221 intron btl + chr3L_17_14075001 chr3L_14075001 RAL-373_125b 1922 chr3L 14099387 14099431 chr3L 14099522 14099571 5 137 10.5 7.5 9.0 0.5 184 chr3L 14099387 intergenic not near genes chr3L 14099479 intergenic not near genes chr3L 14099571 intergenic not near genes chr3L_5_14095001 chr3L_14095001 RAL-373_125b 1923 chr3L 14106121 14106152 chr3L 14106246 14106257 9 122 10.0 8.0 9.0 0.9 136 chr3L 14106121 intron Sox21a - chr3L 14106189 intron Sox21a - chr3L 14106257 intron Sox21a - chr3L_9_14105001 chr3L_14105001 RAL-373_125b 1924 chr3L 14106155 14106190 chr3L 14106241 14106319 7 116 7.0 8.5 7.8 0.8 164 chr3L 14106155 intron Sox21a - chr3L 14106237 intron Sox21a - chr3L 14106319 intron Sox21a - chr3L_7_14105001 chr3L_14105001 RAL-373_125b 1925 chr3L 14107226 14107276 chr3L 14107353 14107402 7 124 10.0 0.0 5.0 1.2 176 chr3L 14107226 intron Sox21a - chr3L 14107314 intron Sox21a - chr3L 14107402 intron Sox21a - chr3L_7_14105001 chr3L_14105001 RAL-373_125b 1926 chr3L 14168303 14168320 chr3L 14168434 14168446 4 130 2.5 0.0 1.2 1.8 143 chr3L 14168303 intergenic not near genes chr3L 14168374 intergenic not near genes chr3L 14168446 intergenic not near genes chr3L_4_14165001 chr3L_14165001 RAL-373_125b 1927 chr3L 14174066 14174092 chr3L 14174192 14174218 5 126 6.0 7.0 6.5 0.7 152 chr3L 14174066 intergenic not near genes chr3L 14174142 intergenic not near genes chr3L 14174218 intergenic not near genes chr3L_5_14170001 chr3L_14170001 RAL-373_125b 1928 chr3L 14175304 14175381 chr3L 14175502 14175579 12 197 1.5 4.0 2.8 3.2 275 chr3L 14175304 intergenic D - chr3L 14175442 intergenic D - chr3L 14175579 intergenic D - chr3L_12_14175001 chr3L_14175001 RAL-373_125b 1929 chr3L 14236001 14236029 chr3L 14236188 14236216 7 185 6.5 2.5 4.5 1.3 215 chr3L 14236001 intergenic CG34244 - chr3L 14236108 intergenic CG34244 - chr3L 14236216 intergenic CG34244 -,CG7906 + chr3L_7_14235001 chr3L_14235001 RAL-373_125b 1930 chr3L 14239938 14240000 chr3L 14240085 14240147 16 144 6.5 4.5 5.5 2.5 209 chr3L 14239938 intergenic CR45399 - chr3L 14240042 intergenic not near genes chr3L 14240147 intergenic not near genes chr3L_16_14240001 chr3L_14240001 RAL-373_125b 1931 chr3L 14245531 14245589 chr3L 14245674 14245733 1360 14 136 12.5 6.5 9.5 1.3 202 chr3L 14245531 3` UTR CR44561 - chr3L 14245632 3` UTR CR44561 - chr3L 14245733 intergenic CR44561 -,CR44560 + chr3L_14_14245001 chr3L_14245001 RAL-373_125b 1932 chr3L 14267367 14267406 chr3L 14271824 14271856 F-element 11 4456 4.5 0.0 2.2 3.4 4489 chr3L 14267367 intergenic not near genes chr3L 14269612 intergenic not near genes chr3L 14271856 intergenic not near genes chr3L_11_14265001 chr3L_14265001 RAL-373_125b 1933 chr3L 14282546 14282606 chr3L 14282666 14282714 18 122 8.0 7.5 7.8 2.0 168 chr3L 14282546 intron fz + chr3L 14282630 intron fz + chr3L 14282714 intron fz + chr3L_18_14280001 chr3L_14280001 RAL-373_125b 1934 chr3L 14295944 14296008 chr3L 14296480 14296538 roo 15 529 3.5 8.5 6.0 2.1 594 chr3L 14295944 intron fz + chr3L 14296241 intron fz + chr3L 14296538 intron fz + chr3L_15_14295001 chr3L_14295001 RAL-373_125b 1935 chr3L 14304456 14304515 chr3L 14304606 14304665 10 150 4.5 5.5 5.0 1.7 209 chr3L 14304456 intron fz + chr3L 14304560 intron fz + chr3L 14304665 intron fz + chr3L_10_14300001 chr3L_14300001 RAL-373_125b 1936 chr3L 14312014 14312050 chr3L 14316859 14316907 X-element 10 4852 2.5 0.0 1.2 4.5 4893 chr3L 14312014 exon fz + chr3L 14314460 intron fz + chr3L 14316907 intron fz + chr3L_10_14310001 chr3L_14310001 RAL-373_125b 1937 chr3L 14341404 14341427 chr3L 14341589 14341612 6 184 0.0 5.5 2.8 1.6 208 chr3L 14341404 intron fz + chr3L 14341508 intron fz + chr3L 14341612 intron fz + chr3L_6_14340001 chr3L_14340001 RAL-373_125b 1938 chr3L 14356480 14356550 chr3L 14356610 14356673 13 124 6.0 4.5 5.2 2.1 193 chr3L 14356480 intron fz + chr3L 14356576 intron fz + chr3L 14356673 intron fz + chr3L_13_14355001 chr3L_14355001 RAL-373_125b 1939 chr3L 14411826 14411894 chr3L 14411955 14412023 12 127 2.5 4.0 3.2 2.9 197 chr3L 14411826 intron CG3919 + chr3L 14411924 intron CG3919 + chr3L 14412023 intron CG3919 + chr3L_12_14410001 chr3L_14410001 RAL-373_125b 1940 chr3L 14439164 14439241 chr3L 14439376 14439454 13 213 6.0 1.5 3.8 2.7 290 chr3L 14439164 intron bbg - chr3L 14439309 intron bbg - chr3L 14439454 intron bbg - chr3L_13_14435001 chr3L_14435001 RAL-373_125b 1941 chr3L 14468412 14468465 chr3L 14473668 14473721 copia 11 5254 5.0 7.5 6.2 1.5 5309 chr3L 14468412 intron bbg - chr3L 14471066 intron bbg - chr3L 14473721 intron bbg - chr3L_11_14470001 chr3L_14470001 RAL-373_125b 1942 chr3L 14473858 14473874 chr3L 14473969 14474001 11 118 8.0 9.0 8.5 1.2 143 chr3L 14473858 intron bbg - chr3L 14473930 intron bbg - chr3L 14474001 intron bbg - chr3L_11_14470001 chr3L_14470001 RAL-373_125b 1943 chr3L 14485972 14486034 chr3L 14486103 14486165 13 129 11.5 5.5 8.5 1.4 193 chr3L 14485972 intron bbg - chr3L 14486068 intron bbg - chr3L 14486165 intron bbg - chr3L_13_14485001 chr3L_14485001 RAL-373_125b 1944 chr3L 14524322 14524331 chr3L 14529132 14529145 F-element 5 4813 7.5 6.0 6.8 0.6 4823 chr3L 14524322 intron bbg - chr3L 14526734 intron bbg - chr3L 14529145 intron bbg - chr3L_5_14525001 chr3L_14525001 RAL-373_125b 1945 chr3L 14531202 14531242 chr3L 14531358 14531399 7 158 1.5 8.0 4.8 1.2 197 chr3L 14531202 intron bbg - chr3L 14531300 intron bbg - chr3L 14531399 intron bbg - chr3L_7_14530001 chr3L_14530001 RAL-373_125b 1946 chr3L 14541679 14541741 chr3L 14541819 14541873 16 138 4.5 4.5 4.5 2.9 194 chr3L 14541679 3` UTR CG9238 - chr3L 14541776 3` UTR CG9238 - chr3L 14541873 3` UTR CG9238 - chr3L_16_14540001 chr3L_14540001 RAL-373_125b 1947 chr3L 14585575 14585583 chr3L 14585693 14585706 4 124 15.0 4.0 9.5 0.4 131 chr3L 14585575 intron HGTX - chr3L 14585640 intron HGTX - chr3L 14585706 intron HGTX - chr3L_4_14585001 chr3L_14585001 RAL-373_125b 1948 chr3L 14585585 14585636 chr3L 14585688 14585762 16 121 8.5 4.5 6.5 2.1 177 chr3L 14585585 intron HGTX - chr3L 14585674 intron HGTX - chr3L 14585762 intron HGTX - chr3L_16_14585001 chr3L_14585001 RAL-373_125b 1949 chr3L 14611427 14611480 chr3L 14611574 14611627 12 146 4.0 3.0 3.5 2.7 200 chr3L 14611427 intergenic not near genes chr3L 14611527 intergenic not near genes chr3L 14611627 intergenic not near genes chr3L_12_14610001 chr3L_14610001 RAL-373_125b 1950 chr3L 14721144 14721202 chr3L 14723037 14723068 Rt1c 12 1884 7.5 8.5 8.0 1.3 1924 chr3L 14721144 intron ome + chr3L 14722106 intron ome + chr3L 14723068 intron ome + chr3L_12_14720001 chr3L_14720001 RAL-373_125b 1951 chr3L 14725557 14725582 chr3L 14728610 14728635 Doc 4 3052 7.5 2.5 5.0 0.7 3078 chr3L 14725557 intron ome + chr3L 14727096 intron ome + chr3L 14728635 intron ome + chr3L_4_14725001 chr3L_14725001 RAL-373_125b 1952 chr3L 14740848 14740911 chr3L 14740987 14741050 11 138 6.0 6.0 6.0 1.6 202 chr3L 14740848 intron ome + chr3L 14740949 intron ome + chr3L 14741050 intron ome + chr3L_11_14740001 chr3L_14740001 RAL-373_125b 1953 chr3L 14864003 14864049 chr3L 14864126 14864177 5 120 1.0 2.5 1.8 1.8 174 chr3L 14864003 intron CG17839 + chr3L 14864090 intron CG17839 + chr3L 14864177 intron CG17839 + chr3L_5_14860001 chr3L_14860001 RAL-373_125b 1954 chr3L 14867631 14867674 chr3L 14867760 14867798 9 128 6.5 3.5 5.0 1.5 167 chr3L 14867631 intron CG17839 + chr3L 14867714 intron CG17839 + chr3L 14867798 intron CG17839 + chr3L_9_14865001 chr3L_14865001 RAL-373_125b 1955 chr3L 14933399 14933450 chr3L 14933531 14933582 11 128 10.0 6.5 8.2 1.2 183 chr3L 14933399 intron DCX-EMAP + chr3L 14933490 intron DCX-EMAP + chr3L 14933582 intron DCX-EMAP + chr3L_11_14930001 chr3L_14930001 RAL-373_125b 1956 chr3L 14970727 14970760 chr3L 14971087 14971120 F-element 5 360 3.5 2.5 3.0 1.2 393 chr3L 14970727 intergenic Tom + chr3L 14970924 intergenic not near genes chr3L 14971120 intergenic not near genes chr3L_5_14970001 chr3L_14970001 RAL-373_125b 1957 chr3L 15035198 15035273 chr3L 15035381 15035440 15 178 7.5 5.5 6.5 2.0 242 chr3L 15035198 intron Sytbeta - chr3L 15035319 intron Sytbeta - chr3L 15035440 intron Sytbeta - chr3L_15_15035001 chr3L_15035001 RAL-373_125b 1958 chr3L 15085010 15085080 chr3L 15086216 15086272 1360 15 1208 4.0 5.5 4.8 2.6 1262 chr3L 15085010 intron cp309 - chr3L 15085641 intron cp309 - chr3L 15086272 intron cp309 - chr3L_15_15085001 chr3L_15085001 RAL-373_125b 1959 chr3L 15094921 15094952 chr3L 15095067 15095088 8 141 2.5 5.0 3.8 1.7 167 chr3L 15094921 intergenic cp309 -,CG6945 -,Aats-gly + chr3L 15095004 intergenic Aats-gly +,cp309 -,CG6945 - chr3L 15095088 intergenic Aats-gly +,cp309 -,CG6945 - chr3L_8_15095001 chr3L_15095001 RAL-373_125b 1960 chr3L 15146115 15146149 chr3L 15146242 15146271 10 126 0.0 3.0 1.5 4.0 156 chr3L 15146115 3` UTR Pex3 + chr3L 15146193 3` UTR Pex3 + chr3L 15146271 3` UTR Pex3 + chr3L_10_15145001 chr3L_15145001 RAL-373_125b 1961 chr3L 15153489 15153536 chr3L 15153606 15153651 10 118 6.5 6.5 6.5 1.3 162 chr3L 15153489 3` UTR FucTA + chr3L 15153570 3` UTR FucTA + chr3L 15153651 3` UTR FucTA + chr3L_10_15150001 chr3L_15150001 RAL-373_125b 1962 chr3L 15164985 15165001 chr3L 15165133 15165149 5 148 6.5 0.0 3.2 1.2 164 chr3L 15164985 intergenic not near genes chr3L 15165067 intergenic not near genes chr3L 15165149 intergenic not near genes chr3L_5_15165001 chr3L_15165001 RAL-373_125b 1963 chr3L 15201378 15201447 chr3L 15201519 15201558 13 137 5.5 2.5 4.0 2.6 180 chr3L 15201378 intergenic not near genes chr3L 15201468 intergenic not near genes chr3L 15201558 intergenic not near genes chr3L_13_15200001 chr3L_15200001 RAL-373_125b 1964 chr3L 15217078 15217129 chr3L 15217232 15217271 19 159 6.5 8.5 7.5 2.2 193 chr3L 15217078 intergenic not near genes chr3L 15217174 intergenic not near genes chr3L 15217271 intergenic not near genes chr3L_19_15215001 chr3L_15215001 RAL-373_125b 1965 chr3L 15257413 15257449 chr3L 15257669 15257712 12 261 2.5 2.5 2.5 3.4 299 chr3L 15257413 intergenic not near genes chr3L 15257562 intergenic not near genes chr3L 15257712 intergenic not near genes chr3L_12_15255001 chr3L_15255001 RAL-373_125b 1966 chr3L 15295731 15295784 chr3L 15298624 15298677 gypsy5 11 2893 4.5 7.5 6.0 1.6 2946 chr3L 15295731 intergenic not near genes chr3L 15297204 intergenic not near genes chr3L 15298677 intergenic Best4 + chr3L_11_15295001 chr3L_15295001 RAL-373_125b 1967 chr3L 15381140 15381181 chr3L 15381485 15381544 5 358 5.0 4.0 4.5 0.9 404 chr3L 15381140 intergenic not near genes chr3L 15381342 intergenic not near genes chr3L 15381544 intergenic not near genes chr3L_5_15380001 chr3L_15380001 RAL-373_125b 1968 chr3L 15400771 15400844 chr3L 15400947 15401009 12 175 2.0 3.5 2.8 3.2 238 chr3L 15400771 intergenic not near genes chr3L 15400890 intergenic not near genes chr3L 15401009 intergenic not near genes chr3L_12_15400001 chr3L_15400001 RAL-373_125b 1969 chr3L 15406914 15406964 chr3L 15407553 15407610 10 646 6.0 4.0 5.0 1.7 696 chr3L 15406914 intergenic not near genes chr3L 15407262 intergenic not near genes chr3L 15407610 intergenic CG33259 + chr3L_10_15405001 chr3L_15405001 RAL-373_125b 1970 chr3L 15417997 15418003 chr3L 15418131 15418137 4 134 16.0 8.5 12.2 0.3 140 chr3L 15417997 intergenic not near genes chr3L 15418067 intergenic not near genes chr3L 15418137 intergenic not near genes chr3L_4_15415001 chr3L_15415001 RAL-373_125b 1971 chr3L 15418005 15418065 chr3L 15418127 15418131 22 125 7.5 7.5 7.5 2.6 126 chr3L 15418005 intergenic not near genes chr3L 15418068 intergenic not near genes chr3L 15418131 intergenic not near genes chr3L_22_15415001 chr3L_15415001 RAL-373_125b 1972 chr3L 15418456 15418525 chr3L 15418591 15418661 20 134 6.5 6.5 6.5 2.7 205 chr3L 15418456 intergenic not near genes chr3L 15418558 intergenic not near genes chr3L 15418661 intergenic not near genes chr3L_20_15415001 chr3L_15415001 RAL-373_125b 1973 chr3L 15420309 15420328 chr3L 15420438 15420457 7 129 3.5 6.0 4.8 1.2 148 chr3L 15420309 intergenic not near genes chr3L 15420383 intergenic not near genes chr3L 15420457 intergenic not near genes chr3L_7_15420001 chr3L_15420001 RAL-373_125b 1974 chr3L 15423727 15423773 chr3L 15426617 15426667 opus 17 2892 4.5 4.0 4.2 3.3 2940 chr3L 15423727 intergenic not near genes chr3L 15425197 intergenic not near genes chr3L 15426667 intergenic not near genes chr3L_17_15425001 chr3L_15425001 RAL-373_125b 1975 chr3L 15444623 15444638 chr3L 15444757 15444770 5 137 13.0 5.0 9.0 0.5 147 chr3L 15444623 intergenic not near genes chr3L 15444696 intergenic not near genes chr3L 15444770 intergenic not near genes chr3L_5_15440001 chr3L_15440001 RAL-373_125b 1976 chr3L 15444642 15444675 chr3L 15444745 15444819 9 129 7.5 4.0 5.8 1.3 177 chr3L 15444642 intergenic not near genes chr3L 15444730 intergenic not near genes chr3L 15444819 intergenic not near genes chr3L_9_15440001 chr3L_15440001 RAL-373_125b 1977 chr3L 15466831 15466846 chr3L 15468203 15468205 5 1366 10.0 22.0 16.0 0.3 1374 chr3L 15466831 intergenic not near genes chr3L 15467518 intergenic not near genes chr3L 15468205 intergenic not near genes chr3L_5_15465001 chr3L_15465001 RAL-373_125b 1978 chr3L 15466848 15466890 chr3L 15468201 15468273 16 1349 7.5 21.5 14.5 1.0 1425 chr3L 15466848 intergenic not near genes chr3L 15467560 intergenic not near genes chr3L 15468273 intergenic not near genes chr3L_16_15465001 chr3L_15465001 RAL-373_125b 1979 chr3L 15466936 15466992 chr3L 15468292 15468348 19 1357 15.5 24.5 20.0 0.9 1412 chr3L 15466936 intergenic not near genes chr3L 15467642 intergenic not near genes chr3L 15468348 intergenic not near genes chr3L_19_15465001 chr3L_15465001 RAL-373_125b 1980 chr3L 15474649 15474689 chr3L 15474833 15474873 8 186 4.0 0.5 2.2 2.5 224 chr3L 15474649 intergenic not near genes chr3L 15474761 intergenic not near genes chr3L 15474873 intergenic not near genes chr3L_8_15470001 chr3L_15470001 RAL-373_125b 1981 chr3L 15493324 15493339 chr3L 15493469 15493484 5 142 3.5 11.5 7.5 0.6 160 chr3L 15493324 exon CG12355 - chr3L 15493404 intron CG12355 - chr3L 15493484 5` UTR CG12355 - chr3L_5_15490001 chr3L_15490001 RAL-373_125b 1982 chr3L 15541582 15541635 chr3L 15541723 15541761 10 136 8.0 2.0 5.0 1.7 179 chr3L 15541582 intron CrebA + chr3L 15541672 intron CrebA + chr3L 15541761 intron CrebA + chr3L_10_15540001 chr3L_15540001 RAL-373_125b 1983 chr3L 15600121 15600187 chr3L 15600253 15600338 10 148 4.5 0.0 2.2 3.1 217 chr3L 15600121 intron RhoGAP71E + chr3L 15600230 intron RhoGAP71E + chr3L 15600338 intron RhoGAP71E + chr3L_10_15600001 chr3L_15600001 RAL-373_125b 1984 chr3L 15614005 15614037 chr3L 15614135 15614167 7 129 5.0 4.5 4.8 1.2 162 chr3L 15614005 exon comm3 - chr3L 15614086 intron comm3 - chr3L 15614167 intron comm3 - chr3L_7_15610001 chr3L_15610001 RAL-373_125b 1985 chr3L 15658613 15658657 chr3L 15658834 15658878 10 221 6.0 4.0 5.0 1.7 265 chr3L 15658613 intergenic Eig71Eh -,Eig71Eg + chr3L 15658746 intergenic Eig71Eh - chr3L 15658878 intergenic Eig71Eh - chr3L_10_15655001 chr3L_15655001 RAL-373_125b 1986 chr3L 15691394 15691436 chr3L 15691494 15691568 10 119 0.0 3.0 1.5 4.0 174 chr3L 15691394 intron CG34451 - chr3L 15691481 intron CG34451 - chr3L 15691568 intron CG34451 - chr3L_10_15690001 chr3L_15690001 RAL-373_125b 1987 chr3L 15746026 15746084 chr3L 15746147 15746210 11 120 4.5 6.0 5.2 1.8 184 chr3L 15746026 intergenic not near genes chr3L 15746118 intergenic not near genes chr3L 15746210 intergenic not near genes chr3L_11_15745001 chr3L_15745001 RAL-373_125b 1988 chr3L 15754432 15754604 chr3L 15754574 15754737 15 137 0.0 0.0 0.0 15.0 305 chr3L 15754432 intergenic not near genes chr3L 15754584 intergenic not near genes chr3L 15754737 intergenic not near genes chr3L_15_15750001 chr3L_15750001 RAL-373_125b 1989 chr3L 15765636 15765670 chr3L 15765728 15765797 11 111 3.5 1.0 2.2 3.4 161 chr3L 15765636 intergenic not near genes chr3L 15765716 intergenic not near genes chr3L 15765797 intergenic not near genes chr3L_11_15765001 chr3L_15765001 RAL-373_125b 1990 chr3L 15832216 15832282 chr3L 15832347 15832393 21 129 7.5 7.5 7.5 2.5 177 chr3L 15832216 intergenic dbo +,CG12713 + chr3L 15832304 intergenic CG12713 +,dbo + chr3L 15832393 intergenic CG12713 +,dbo + chr3L_21_15830001 chr3L_15830001 RAL-373_125b 1991 chr3L 15840414 15840463 chr3L 15840552 15840598 7 136 6.5 7.5 7.0 0.9 184 chr3L 15840414 intron CG32150 - chr3L 15840506 intron CG32150 - chr3L 15840598 intron CG32150 - chr3L_7_15840001 chr3L_15840001 RAL-373_125b 1992 chr3L 15880565 15880625 chr3L 15880675 15880729 16 119 3.5 3.0 3.2 3.8 164 chr3L 15880565 intron pHCl - chr3L 15880647 intron pHCl - chr3L 15880729 intron pHCl - chr3L_16_15880001 chr3L_15880001 RAL-373_125b 1993 chr3L 15883151 15883213 chr3L 15883494 15883517 15 332 4.0 8.0 6.0 2.1 366 chr3L 15883151 intron pHCl - chr3L 15883334 intron pHCl - chr3L 15883517 intron pHCl - chr3L_15_15880001 chr3L_15880001 RAL-373_125b 1994 chr3L 15899203 15899254 chr3L 15899789 15899836 jockey 12 592 3.0 0.0 1.5 4.8 633 chr3L 15899203 intergenic pHCl - chr3L 15899520 intergenic pHCl - chr3L 15899836 intergenic sff - chr3L_12_15895001 chr3L_15895001 RAL-373_125b 1995 chr3L 15929159 15929218 chr3L 15938352 15938412 roo 12 9196 6.5 5.0 5.8 1.8 9253 chr3L 15929159 intron Pka-C3 - chr3L 15933786 intron Pka-C3 - chr3L 15938412 intron Pka-C3 - chr3L_12_15930001 chr3L_15930001 RAL-373_125b 1996 chr3L 15939814 15939879 chr3L 15939933 15939995 11 119 4.5 5.0 4.8 1.9 181 chr3L 15939814 intron Pka-C3 - chr3L 15939904 intron Pka-C3 - chr3L 15939995 intron Pka-C3 - chr3L_11_15935001 chr3L_15935001 RAL-373_125b 1997 chr3L 15946464 15946531 chr3L 15946600 15946667 8 135 5.0 0.0 2.5 2.3 203 chr3L 15946464 intron Pka-C3 - chr3L 15946566 intron Pka-C3 - chr3L 15946667 intron Pka-C3 - chr3L_8_15945001 chr3L_15945001 RAL-373_125b 1998 chr3L 15981631 15981708 chr3L 15981767 15981838 17 135 5.0 5.0 5.0 2.8 207 chr3L 15981631 intron,3` UTR brm -,CG17027 + chr3L 15981734 intron,3` UTR brm -,CG17027 + chr3L 15981838 intron,3` UTR brm -,CG17027 + chr3L_17_15980001 chr3L_15980001 RAL-373_125b 1999 chr3L 15989189 15989218 chr3L 15989322 15989351 8 132 5.5 5.5 5.5 1.2 162 chr3L 15989189 intron Hip14 + chr3L 15989270 intron Hip14 + chr3L 15989351 intron Hip14 + chr3L_8_15985001 chr3L_15985001 RAL-373_125b 2000 chr3L 16047749 16047763 chr3L 16047878 16047892 5 129 0.0 6.0 3.0 1.2 143 chr3L 16047749 intron th - chr3L 16047820 intron th - chr3L 16047892 intron th - chr3L_5_16045001 chr3L_16045001 RAL-373_125b 2001 chr3L 16070692 16070756 chr3L 16070819 16070870 16 124 9.0 7.0 8.0 1.8 178 chr3L 16070692 intron Mbs + chr3L 16070781 intron Mbs + chr3L 16070870 exon Mbs + chr3L_16_16070001 chr3L_16070001 RAL-373_125b 2002 chr3L 16077910 16077975 chr3L 16078059 16078123 15 155 4.0 4.0 4.0 3.0 213 chr3L 16077910 intron Mbs + chr3L 16078016 intron Mbs + chr3L 16078123 intron Mbs + chr3L_15_16075001 chr3L_16075001 RAL-373_125b 2003 chr3L 16162601 16162625 chr3L 16162723 16162764 6 133 6.0 4.0 5.0 1.0 163 chr3L 16162601 intron CG5151 - chr3L 16162682 intron CG5151 - chr3L 16162764 intron CG5151 - chr3L_6_16160001 chr3L_16160001 RAL-373_125b 2004 chr3L 16184072 16184111 chr3L 16188941 16188980 X-element 8 4866 9.5 9.0 9.2 0.8 4908 chr3L 16184072 intergenic not near genes chr3L 16186526 intergenic not near genes chr3L 16188980 intergenic not near genes chr3L_8_16185001 chr3L_16185001 RAL-373_125b 2005 chr3L 16234954 16235021 chr3L 16235093 16235154 19 134 10.0 3.5 6.8 2.4 200 chr3L 16234954 exon l(3)72Dp + chr3L 16235054 intron l(3)72Dp + chr3L 16235154 intron l(3)72Dp + chr3L_19_16235001 chr3L_16235001 RAL-373_125b 2006 chr3L 16240707 16240777 chr3L 16240889 16240959 7 182 0.0 4.0 2.0 2.3 252 chr3L 16240707 intergenic not near genes chr3L 16240833 intergenic not near genes chr3L 16240959 intergenic not near genes chr3L_7_16240001 chr3L_16240001 RAL-373_125b 2007 chr3L 16243648 16243677 chr3L 16243789 16243812 8 140 0.0 8.0 4.0 1.6 164 chr3L 16243648 intergenic not near genes chr3L 16243730 intergenic not near genes chr3L 16243812 intergenic not near genes chr3L_8_16240001 chr3L_16240001 RAL-373_125b 2008 chr3L 16258343 16258410 chr3L 16258479 16258546 15 133 9.0 6.0 7.5 1.8 203 chr3L 16258343 intergenic not near genes chr3L 16258444 intergenic not near genes chr3L 16258546 intergenic CG13053 - chr3L_15_16255001 chr3L_16255001 RAL-373_125b 2009 chr3L 16304817 16304893 chr3L 16304943 16305011 19 126 6.0 8.0 7.0 2.4 194 chr3L 16304817 intergenic CG43249 +,CG13043 - chr3L 16304914 intergenic CG43249 +,CG13043 - chr3L 16305011 intergenic CG13043 -,CG43249 + chr3L_19_16300001 chr3L_16300001 RAL-373_125b 2010 chr3L 16311204 16311254 chr3L 16311345 16311402 9 146 4.5 3.0 3.8 1.9 198 chr3L 16311204 5` UTR CR32160 + chr3L 16311303 5` UTR CR32160 + chr3L 16311402 intergenic CR32160 + chr3L_9_16310001 chr3L_16310001 RAL-373_125b 2011 chr3L 16322782 16322853 chr3L 16322922 16322988 18 135 4.0 4.5 4.2 3.5 206 chr3L 16322782 intergenic not near genes chr3L 16322885 intergenic not near genes chr3L 16322988 intergenic not near genes chr3L_18_16320001 chr3L_16320001 RAL-373_125b 2012 chr3L 16345537 16345555 chr3L 16345718 16345736 4 181 0.0 5.0 2.5 1.1 199 chr3L 16345537 intergenic CG4998 + chr3L 16345636 intergenic CG4998 + chr3L 16345736 intergenic CG4998 + chr3L_4_16345001 chr3L_16345001 RAL-373_125b 2013 chr3L 16359918 16359939 chr3L 16360228 16360259 8 316 6.5 6.5 6.5 1.1 341 chr3L 16359918 intron CG45057 - chr3L 16360088 intron CG45057 - chr3L 16360259 intron CG45057 - chr3L_8_16360001 chr3L_16360001 RAL-373_125b 2014 chr3L 16360844 16360913 chr3L 16360966 16361025 26 122 5.5 4.0 4.8 4.5 181 chr3L 16360844 intron CG45057 - chr3L 16360934 intron CG45057 - chr3L 16361025 intron CG45057 - chr3L_26_16360001 chr3L_16360001 RAL-373_125b 2015 chr3L 16370334 16370378 chr3L 16370856 16370931 15 545 6.0 3.5 4.8 2.6 597 chr3L 16370334 exon CG18814 + chr3L 16370632 exon CG18814 + chr3L 16370931 3` UTR CG18814 + chr3L_15_16370001 chr3L_16370001 RAL-373_125b 2016 chr3L 16387984 16388019 chr3L 16388104 16388115 11 113 5.0 11.5 8.2 1.2 131 chr3L 16387984 exon RAF2 + chr3L 16388050 exon RAF2 + chr3L 16388115 exon RAF2 + chr3L_11_16385001 chr3L_16385001 RAL-373_125b 2017 chr3L 16443799 16443875 chr3L 16446189 16446265 Doc 15 2387 2.0 5.5 3.8 3.1 2466 chr3L 16443799 intron,intron CG33158 +,dsx-c73A - chr3L 16445032 intron,intron CG33158 +,dsx-c73A - chr3L 16446265 intron,intron CG33158 +,dsx-c73A - chr3L_15_16445001 chr3L_16445001 RAL-373_125b 2018 chr3L 16450000 16450052 chr3L 16450130 16450187 12 133 1.0 6.5 3.8 2.5 187 chr3L 16450000 intron,intron CG33158 +,dsx-c73A - chr3L 16450094 intron,intron CG33158 +,dsx-c73A - chr3L 16450187 intron,exon CG33158 +,dsx-c73A - chr3L_12_16450001 chr3L_16450001 RAL-373_125b 2019 chr3L 16493941 16493998 chr3L 16494501 16494565 jockey 21 563 6.5 6.5 6.5 2.8 624 chr3L 16493941 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494253 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494565 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_21_16490001 chr3L_16490001 RAL-373_125b 2020 chr3L 16503605 16503620 chr3L 16503726 16503731 4 119 10.0 11.0 10.5 0.3 126 chr3L 16503605 intron CG43373 - chr3L 16503668 intron CG43373 - chr3L 16503731 intron CG43373 - chr3L_4_16500001 chr3L_16500001 RAL-373_125b 2021 chr3L 16503627 16503656 chr3L 16503724 16503766 9 117 3.5 11.0 7.2 1.1 139 chr3L 16503627 intron CG43373 - chr3L 16503696 intron CG43373 - chr3L 16503766 intron CG43373 - chr3L_9_16500001 chr3L_16500001 RAL-373_125b 2022 chr3L 16506114 16506136 chr3L 16506309 16506331 8 194 0.0 3.0 1.5 3.2 217 chr3L 16506114 intron CG43373 - chr3L 16506222 intron CG43373 - chr3L 16506331 intron CG43373 - chr3L_8_16505001 chr3L_16505001 RAL-373_125b 2023 chr3L 16533519 16533574 chr3L 16533680 16533735 8 161 0.0 4.5 2.2 2.5 216 chr3L 16533519 intron CG43373 - chr3L 16533627 intron CG43373 - chr3L 16533735 intron CG43373 - chr3L_8_16530001 chr3L_16530001 RAL-373_125b 2024 chr3L 16537823 16537870 chr3L 16537955 16538007 9 136 3.0 13.5 8.2 1.0 184 chr3L 16537823 intron CG43373 - chr3L 16537915 intron CG43373 - chr3L 16538007 intron CG43373 - chr3L_9_16535001 chr3L_16535001 RAL-373_125b 2025 chr3L 16540012 16540063 chr3L 16540145 16540201 20 135 5.5 7.5 6.5 2.7 189 chr3L 16540012 intron CG43373 - chr3L 16540106 intron CG43373 - chr3L 16540201 intron CG43373 - chr3L_20_16540001 chr3L_16540001 RAL-373_125b 2026 chr3L 16610640 16610710 chr3L 16610774 16610845 12 133 4.5 8.5 6.5 1.6 205 chr3L 16610640 intergenic Su(P) -,Prosbeta6 - chr3L 16610742 exon Su(P) - chr3L 16610845 intron Su(P) - chr3L_12_16610001 chr3L_16610001 RAL-373_125b 2027 chr3L 16616467 16616522 chr3L 16621845 16621900 297 8 5374 5.0 8.5 6.8 1.0 5433 chr3L 16616467 3` UTR Abl - chr3L 16619184 3` UTR Abl - chr3L 16621900 3` UTR Abl - chr3L_8_16615001 chr3L_16615001 RAL-373_125b 2028 chr3L 16632188 16632260 chr3L 16632417 16632440 8 222 6.5 4.5 5.5 1.2 252 chr3L 16632188 intron Abl - chr3L 16632314 intron Abl - chr3L 16632440 intron Abl - chr3L_8_16630001 chr3L_16630001 RAL-373_125b 2029 chr3L 16699970 16700022 chr3L 16700106 16700151 9 135 5.5 0.5 3.0 2.2 181 chr3L 16699970 intron,intron Lasp -,CG43954 - chr3L 16700060 intron,intron Lasp -,CG43954 - chr3L 16700151 intron,intron Lasp -,CG43954 - chr3L_9_16700001 chr3L_16700001 RAL-373_125b 2030 chr3L 16708481 16708548 chr3L 16708635 16708677 10 150 1.5 1.5 1.5 4.0 196 chr3L 16708481 intron,intron Lasp -,CG43954 - chr3L 16708579 intron,intron Lasp -,CG43954 - chr3L 16708677 intron,intron Lasp -,CG43954 - chr3L_10_16705001 chr3L_16705001 RAL-373_125b 2031 chr3L 16735829 16735882 chr3L 16735982 16736035 8 150 4.0 8.0 6.0 1.1 206 chr3L 16735829 intron CG9701 + chr3L 16735932 intron CG9701 + chr3L 16736035 intron CG9701 + chr3L_8_16735001 chr3L_16735001 RAL-373_125b 2032 chr3L 16757595 16757668 chr3L 16757735 16757798 16 138 4.0 5.0 4.5 2.9 203 chr3L 16757595 intergenic not near genes chr3L 16757696 intergenic not near genes chr3L 16757798 intergenic not near genes chr3L_16_16755001 chr3L_16755001 RAL-373_125b 2033 chr3L 16800541 16800598 chr3L 16800729 16800786 9 188 7.5 5.5 6.5 1.2 245 chr3L 16800541 intron CG9674 - chr3L 16800664 intron CG9674 - chr3L 16800786 intron CG9674 - chr3L_9_16800001 chr3L_16800001 RAL-373_125b 2034 chr3L 16807995 16808074 chr3L 16808121 16808198 9 125 4.5 1.5 3.0 2.2 203 chr3L 16807995 intron nudC + chr3L 16808096 intron nudC + chr3L 16808198 intron nudC + chr3L_9_16805001 chr3L_16805001 RAL-373_125b 2035 chr3L 16812099 16812155 chr3L 16812223 16812275 15 110 8.5 9.5 9.0 1.5 176 chr3L 16812099 intron,intron nudC +,CG13024 - chr3L 16812187 intron,intron nudC +,CG13024 - chr3L 16812275 intron,intron nudC +,CG13024 - chr3L_15_16810001 chr3L_16810001 RAL-373_125b 2036 chr3L 16817844 16817900 chr3L 16818019 16818090 17 183 8.5 5.5 7.0 2.1 246 chr3L 16817844 intron,intron nudC +,CG13024 - chr3L 16817967 intron,intron nudC +,CG13024 - chr3L 16818090 intron,intron nudC +,CG13024 - chr3L_17_16815001 chr3L_16815001 RAL-373_125b 2037 chr3L 16844986 16845041 chr3L 16845140 16845204 10 161 5.0 5.5 5.2 1.6 218 chr3L 16844986 5` UTR CG9669 - chr3L 16845095 intergenic CG9669 -,CG9715 + chr3L 16845204 intergenic CG9715 +,CG9669 - chr3L_10_16845001 chr3L_16845001 RAL-373_125b 2038 chr3L 16873290 16873360 chr3L 16873444 16873515 10 152 4.5 4.0 4.2 1.9 225 chr3L 16873290 intron Lmpt + chr3L 16873402 intron Lmpt + chr3L 16873515 intron Lmpt + chr3L_10_16870001 chr3L_16870001 RAL-373_125b 2039 chr3L 16887589 16887657 chr3L 16887716 16887783 20 126 7.5 6.0 6.8 2.6 194 chr3L 16887589 intron Lmpt + chr3L 16887686 intron Lmpt + chr3L 16887783 intron Lmpt + chr3L_20_16885001 chr3L_16885001 RAL-373_125b 2040 chr3L 16894940 16894976 chr3L 16895075 16895101 8 134 3.0 4.0 3.5 1.8 161 chr3L 16894940 intron Lmpt + chr3L 16895020 intron Lmpt + chr3L 16895101 intron Lmpt + chr3L_8_16895001 chr3L_16895001 RAL-373_125b 2041 chr3L 16945697 16945761 chr3L 16954894 16954958 roo 14 9186 2.5 4.0 3.2 3.3 9261 chr3L 16945697 exon Obp73a + chr3L 16950328 intergenic not near genes chr3L 16954958 5` UTR Nc73EF + chr3L_14_16950001 chr3L_16950001 RAL-373_125b 2042 chr3L 16986006 16986070 chr3L 16986327 16986382 10 312 0.0 7.5 3.8 2.1 376 chr3L 16986006 intron Exn + chr3L 16986194 intron Exn + chr3L 16986382 intron Exn + chr3L_10_16985001 chr3L_16985001 RAL-373_125b 2043 chr3L 17004349 17004418 chr3L 17004519 17004588 9 167 5.0 5.5 5.2 1.5 239 chr3L 17004349 intron CG3764 - chr3L 17004468 intron CG3764 - chr3L 17004588 intron CG3764 - chr3L_9_17000001 chr3L_17000001 RAL-373_125b 2044 chr3L 17026761 17026815 chr3L 17026871 17026946 17 117 12.0 4.5 8.2 1.8 185 chr3L 17026761 exon Fit2 + chr3L 17026854 3` UTR Fit2 + chr3L 17026946 3` UTR Fit2 + chr3L_17_17025001 chr3L_17025001 RAL-373_125b 2045 chr3L 17027129 17027183 chr3L 17027271 17027325 16 140 3.5 4.5 4.0 3.2 196 chr3L 17027129 intergenic Fit2 +,CG7730 + chr3L 17027227 intergenic Fit2 +,CG7730 + chr3L 17027325 intergenic CG7730 +,Fit2 + chr3L_16_17025001 chr3L_17025001 RAL-373_125b 2046 chr3L 17034914 17034962 chr3L 17035152 17035200 G2 4 238 3.5 10.0 6.8 0.5 286 chr3L 17034914 intergenic not near genes chr3L 17035057 intergenic not near genes chr3L 17035200 intergenic beg + chr3L_4_17035001 chr3L_17035001 RAL-373_125b 2047 chr3L 17084959 17085014 chr3L 17094158 17094208 roo 16 9198 12.0 8.5 10.2 1.4 9249 chr3L 17084959 intron Rbp6 - chr3L 17089584 intron Rbp6 - chr3L 17094208 intron Rbp6 - chr3L_16_17085001 chr3L_17085001 RAL-373_125b 2048 chr3L 17120604 17120677 chr3L 17120730 17120803 26 123 6.0 4.5 5.2 4.2 199 chr3L 17120604 intron Rbp6 - chr3L 17120704 intron Rbp6 - chr3L 17120803 intron Rbp6 - chr3L_26_17120001 chr3L_17120001 RAL-373_125b 2049 chr3L 17142702 17142745 chr3L 17142971 17143014 14 274 5.0 5.5 5.2 2.3 312 chr3L 17142702 intron Rbp6 - chr3L 17142858 intron Rbp6 - chr3L 17143014 intron Rbp6 - chr3L_14_17140001 chr3L_17140001 RAL-373_125b 2050 chr3L 17146912 17146975 chr3L 17147044 17147107 17 129 6.0 4.0 5.0 2.8 195 chr3L 17146912 intron Rbp6 - chr3L 17147010 intron Rbp6 - chr3L 17147107 intron Rbp6 - chr3L_17_17145001 chr3L_17145001 RAL-373_125b 2051 chr3L 17149117 17149169 chr3L 17149248 17149263 10 126 10.0 0.5 5.2 1.6 146 chr3L 17149117 intron Rbp6 - chr3L 17149190 intron Rbp6 - chr3L 17149263 intron Rbp6 - chr3L_10_17145001 chr3L_17145001 RAL-373_125b 2052 chr3L 17178259 17178319 chr3L 17178433 17178493 16 172 6.5 5.5 6.0 2.3 234 chr3L 17178259 intron Rbp6 - chr3L 17178376 intron Rbp6 - chr3L 17178493 intron Rbp6 - chr3L_16_17175001 chr3L_17175001 RAL-373_125b 2053 chr3L 17250438 17250459 chr3L 17250553 17250562 5 119 9.0 10.5 9.8 0.5 124 chr3L 17250438 intron CR43870 + chr3L 17250500 intron CR43870 + chr3L 17250562 intron CR43870 + chr3L_5_17250001 chr3L_17250001 RAL-373_125b 2054 chr3L 17272192 17272251 chr3L 17272375 17272434 7 178 4.0 8.0 6.0 1.0 242 chr3L 17272192 intergenic not near genes chr3L 17272313 intergenic not near genes chr3L 17272434 intergenic not near genes chr3L_7_17270001 chr3L_17270001 RAL-373_125b 2055 chr3L 17296888 17296965 chr3L 17297047 17297125 12 156 3.0 2.5 2.8 3.2 237 chr3L 17296888 intergenic not near genes chr3L 17297006 intergenic not near genes chr3L 17297125 intergenic not near genes chr3L_12_17295001 chr3L_17295001 RAL-373_125b 2056 chr3L 17431259 17431315 chr3L 17431395 17431451 14 135 9.0 7.5 8.2 1.5 192 chr3L 17431259 intron,3` UTR CG32174 -,frc - chr3L 17431355 intron,3` UTR CG32174 -,frc - chr3L 17431451 intron,3` UTR CG32174 -,frc - chr3L_14_17430001 chr3L_17430001 RAL-373_125b 2057 chr3L 17461968 17461994 chr3L 17462165 17462191 6 197 4.0 4.0 4.0 1.2 223 chr3L 17461968 intergenic not near genes chr3L 17462080 intergenic not near genes chr3L 17462191 intergenic not near genes chr3L_6_17460001 chr3L_17460001 RAL-373_125b 2058 chr3L 17482415 17482418 chr3L 17482542 17482545 4 127 2.0 1.5 1.8 1.4 130 chr3L 17482415 intron CG6333 - chr3L 17482480 intron CG6333 - chr3L 17482545 intron CG6333 - chr3L_4_17480001 chr3L_17480001 RAL-373_125b 2059 chr3L 17488017 17488086 chr3L 17488149 17488208 24 130 6.5 5.5 6.0 3.4 191 chr3L 17488017 intron Oatp74D + chr3L 17488112 5` UTR Oatp74D + chr3L 17488208 5` UTR Oatp74D + chr3L_24_17485001 chr3L_17485001 RAL-373_125b 2060 chr3L 17495193 17495257 chr3L 17495358 17495386 13 153 4.5 3.5 4.0 2.6 193 chr3L 17495193 intron,exon Oatp74D +,edin + chr3L 17495290 intron,3` UTR Oatp74D +,edin + chr3L 17495386 intron Oatp74D + chr3L_13_17495001 chr3L_17495001 RAL-373_125b 2061 chr3L 17498073 17498113 chr3L 17498192 17498240 16 121 5.0 2.5 3.8 3.3 167 chr3L 17498073 intron Oatp74D + chr3L 17498156 intron Oatp74D + chr3L 17498240 intron Oatp74D + chr3L_16_17495001 chr3L_17495001 RAL-373_125b 2062 chr3L 17510713 17510759 chr3L 17510836 17510883 13 131 5.5 5.0 5.2 2.1 170 chr3L 17510713 exon Oatp74D + chr3L 17510798 intron Oatp74D + chr3L 17510883 intron Oatp74D + chr3L_13_17510001 chr3L_17510001 RAL-373_125b 2063 chr3L 17516948 17517005 chr3L 17524545 17524597 412 20 7603 5.0 7.5 6.2 2.8 7649 chr3L 17516948 intron CG7564 + chr3L 17520772 intron CG7564 + chr3L 17524597 3` UTR CG7564 + chr3L_20_17520001 chr3L_17520001 RAL-373_125b 2064 chr3L 17592745 17592801 chr3L 17592886 17592942 9 141 11.0 10.5 10.8 0.8 197 chr3L 17592745 intron Eip74EF - chr3L 17592844 intron Eip74EF - chr3L 17592942 intron Eip74EF - chr3L_9_17590001 chr3L_17590001 RAL-373_125b 2065 chr3L 17659681 17659750 chr3L 17659805 17659877 11 127 5.5 4.5 5.0 1.8 196 chr3L 17659681 intergenic Crtc - chr3L 17659779 intergenic Crtc - chr3L 17659877 3` UTR Crtc - chr3L_11_17655001 chr3L_17655001 RAL-373_125b 2066 chr3L 17730811 17730870 chr3L 17738191 17738250 mdg1 19 7378 7.0 3.0 5.0 3.2 7439 chr3L 17730811 intron Ccn + chr3L 17734530 intron Ccn + chr3L 17738250 intron Ccn + chr3L_19_17730001 chr3L_17730001 RAL-373_125b 2067 chr3L 17787651 17787685 chr3L 17787794 17787828 8 142 13.0 4.5 8.8 0.8 177 chr3L 17787651 intergenic not near genes chr3L 17787740 intergenic not near genes chr3L 17787828 intergenic not near genes chr3L_8_17785001 chr3L_17785001 RAL-373_125b 2068 chr3L 17789827 17789865 chr3L 17789935 17789991 6 118 5.5 6.5 6.0 0.9 164 chr3L 17789827 intergenic not near genes chr3L 17789909 intergenic not near genes chr3L 17789991 intergenic not near genes chr3L_6_17785001 chr3L_17785001 RAL-373_125b 2069 chr3L 17790571 17790635 chr3L 17790886 17790950 16 311 6.5 4.0 5.2 2.6 379 chr3L 17790571 intergenic not near genes chr3L 17790760 intergenic CG42815 - chr3L 17790950 intergenic CG42815 - chr3L_16_17790001 chr3L_17790001 RAL-373_125b 2070 chr3L 17799786 17799809 chr3L 17801623 17801646 S-element 8 1837 5.5 7.5 6.5 1.1 1860 chr3L 17799786 intron NUCB1 - chr3L 17800716 intron NUCB1 - chr3L 17801646 intron NUCB1 - chr3L_8_17800001 chr3L_17800001 RAL-373_125b 2071 chr3L 17834306 17834341 chr3L 17834508 17834555 7 211 0.5 3.5 2.0 2.3 249 chr3L 17834306 intron Grd + chr3L 17834430 intron Grd + chr3L 17834555 intron Grd + chr3L_7_17830001 chr3L_17830001 RAL-373_125b 2072 chr3L 17837578 17837650 chr3L 17837716 17837778 20 130 2.5 4.0 3.2 4.8 200 chr3L 17837578 exon Grd + chr3L 17837678 intron Grd + chr3L 17837778 exon Grd + chr3L_20_17835001 chr3L_17835001 RAL-373_125b 2073 chr3L 17918334 17918401 chr3L 17921181 17921246 opus 10 2848 4.5 3.5 4.0 2.0 2912 chr3L 17918334 intergenic not near genes chr3L 17919790 intergenic not near genes chr3L 17921246 intergenic not near genes chr3L_10_17915001 chr3L_17915001 RAL-373_125b 2074 chr3L 17921835 17921881 chr3L 17921967 17922018 4 136 7.0 2.0 4.5 0.7 183 chr3L 17921835 intergenic not near genes chr3L 17921926 intergenic not near genes chr3L 17922018 intergenic not near genes chr3L_4_17920001 chr3L_17920001 RAL-373_125b 2075 chr3L 17946020 17946039 chr3L 17946151 17946170 7 130 3.0 3.5 3.2 1.7 150 chr3L 17946020 3` UTR CG43174 + chr3L 17946095 3` UTR CG43174 + chr3L 17946170 intergenic CG43174 + chr3L_7_17945001 chr3L_17945001 RAL-373_125b 2076 chr3L 17965469 17965498 chr3L 17965634 17965653 6 164 4.5 9.0 6.8 0.8 184 chr3L 17965469 intron Eip75B - chr3L 17965561 intron Eip75B - chr3L 17965653 intron Eip75B - chr3L_6_17965001 chr3L_17965001 RAL-373_125b 2077 chr3L 17989109 17989134 chr3L 17989258 17989283 6 146 6.0 13.0 9.5 0.6 174 chr3L 17989109 intron Eip75B - chr3L 17989196 intron Eip75B - chr3L 17989283 intron Eip75B - chr3L_6_17985001 chr3L_17985001 RAL-373_125b 2078 chr3L 17991532 17991579 chr3L 17991660 17991705 14 126 6.0 3.0 4.5 2.5 173 chr3L 17991532 intron Eip75B - chr3L 17991618 intron Eip75B - chr3L 17991705 intron Eip75B - chr3L_14_17990001 chr3L_17990001 RAL-373_125b 2079 chr3L 18000645 18000699 chr3L 18000752 18000826 18 123 9.0 6.0 7.5 2.1 181 chr3L 18000645 intron Eip75B - chr3L 18000736 intron Eip75B - chr3L 18000826 intron Eip75B - chr3L_18_18000001 chr3L_18000001 RAL-373_125b 2080 chr3L 18024004 18024046 chr3L 18024157 18024157 8 147 2.5 0.0 1.2 3.6 153 chr3L 18024004 intron Eip75B - chr3L 18024080 intron Eip75B - chr3L 18024157 intron Eip75B - chr3L_8_18020001 chr3L_18020001 RAL-373_125b 2081 chr3L 18029255 18029297 chr3L 18029409 18029451 5 154 0.0 2.5 1.2 2.3 196 chr3L 18029255 intron Eip75B - chr3L 18029353 intron Eip75B - chr3L 18029451 intron Eip75B - chr3L_5_18025001 chr3L_18025001 RAL-373_125b 2082 chr3L 18047668 18047732 chr3L 18056770 18056839 roo 9 9106 4.0 5.5 4.8 1.6 9171 chr3L 18047668 intron Eip75B - chr3L 18052254 intron Eip75B - chr3L 18056839 intron Eip75B - chr3L_9_18050001 chr3L_18050001 RAL-373_125b 2083 chr3L 18064017 18064076 chr3L 18064153 18064212 14 134 0.5 2.5 1.5 5.6 195 chr3L 18064017 intron Eip75B - chr3L 18064114 intron Eip75B - chr3L 18064212 intron Eip75B - chr3L_14_18060001 chr3L_18060001 RAL-373_125b 2084 chr3L 18075199 18075251 chr3L 18075514 18075566 22 314 6.5 9.5 8.0 2.4 367 chr3L 18075199 intergenic not near genes chr3L 18075382 intergenic not near genes chr3L 18075566 intergenic not near genes chr3L_22_18075001 chr3L_18075001 RAL-373_125b 2085 chr3L 18092085 18092142 chr3L 18092217 18092274 4 132 0.0 3.0 1.5 1.6 189 chr3L 18092085 intron CG13698 - chr3L 18092180 intron CG13698 - chr3L 18092274 intron CG13698 - chr3L_4_18090001 chr3L_18090001 RAL-373_125b 2086 chr3L 18102610 18102676 chr3L 18102737 18102813 19 136 6.5 6.0 6.2 2.6 203 chr3L 18102610 intron CG13698 - chr3L 18102712 intron CG13698 - chr3L 18102813 intron CG13698 - chr3L_19_18100001 chr3L_18100001 RAL-373_125b 2087 chr3L 18106210 18106284 chr3L 18106379 18106412 10 159 4.5 1.0 2.8 2.6 202 chr3L 18106210 intergenic CG13698 -,mRpS26 + chr3L 18106311 intergenic CG13698 -,mRpS26 + chr3L 18106412 intergenic mRpS26 +,CG13698 - chr3L_10_18105001 chr3L_18105001 RAL-373_125b 2088 chr3L 18107578 18107627 chr3L 18107711 18107770 4 140 7.0 3.5 5.2 0.6 192 chr3L 18107578 intergenic mRpS26 +,CG5147 - chr3L 18107674 intergenic CG5147 -,mRpS26 + chr3L 18107770 intergenic CG5147 -,mRpS26 + chr3L_4_18105001 chr3L_18105001 RAL-373_125b 2089 chr3L 18128783 18128798 chr3L 18128925 18128940 4 142 4.0 0.0 2.0 1.3 157 chr3L 18128783 intergenic Cyp312a1 - chr3L 18128862 intergenic Cyp312a1 - chr3L 18128940 3` UTR Cyp312a1 - chr3L_4_18125001 chr3L_18125001 RAL-373_125b 2090 chr3L 18132991 18133019 chr3L 18133129 18133159 12 138 2.5 0.0 1.2 5.5 168 chr3L 18132991 intergenic Cyp312a1 - chr3L 18133075 intergenic Cyp312a1 - chr3L 18133159 intergenic Cyp312a1 - chr3L_12_18130001 chr3L_18130001 RAL-373_125b 2091 chr3L 18135703 18135755 chr3L 18135833 18135860 8 127 2.5 0.0 1.2 3.6 157 chr3L 18135703 intergenic CR44669 - chr3L 18135782 intergenic CR44669 - chr3L 18135860 3` UTR CR44669 - chr3L_8_18135001 chr3L_18135001 RAL-373_125b 2092 chr3L 18160639 18160657 chr3L 18160768 18160789 5 123 6.5 6.5 6.5 0.7 150 chr3L 18160639 intron CG13699 - chr3L 18160714 intron CG13699 - chr3L 18160789 intron CG13699 - chr3L_5_18160001 chr3L_18160001 RAL-373_125b 2093 chr3L 18163935 18164219 chr3L 18164187 18164436 12 225 0.0 0.0 0.0 12.0 501 chr3L 18163935 intergenic not near genes chr3L 18164186 intergenic not near genes chr3L 18164436 intergenic not near genes chr3L_12_18160001 chr3L_18160001 RAL-373_125b 2094 chr3L 18170848 18170919 chr3L 18170978 18171048 9 126 4.0 3.0 3.5 2.0 200 chr3L 18170848 intron W - chr3L 18170948 intron W - chr3L 18171048 intron W - chr3L_9_18170001 chr3L_18170001 RAL-373_125b 2095 chr3L 18175765 18175831 chr3L 18176054 18176115 17 288 7.0 4.0 5.5 2.6 350 chr3L 18175765 intron W - chr3L 18175940 intron W - chr3L 18176115 intron W - chr3L_17_18175001 chr3L_18175001 RAL-373_125b 2096 chr3L 18180954 18180964 chr3L 18181087 18181096 4 131 5.0 10.5 7.8 0.5 142 chr3L 18180954 intron W - chr3L 18181025 intron W - chr3L 18181096 intron W - chr3L_4_18180001 chr3L_18180001 RAL-373_125b 2097 chr3L 18186589 18186615 chr3L 18186772 18186804 12 188 8.0 2.5 5.2 1.9 215 chr3L 18186589 intergenic not near genes chr3L 18186696 intergenic not near genes chr3L 18186804 intergenic not near genes chr3L_12_18185001 chr3L_18185001 RAL-373_125b 2098 chr3L 18198930 18198931 chr3L 24821493 24821494 10 6622563 1.5 14.5 8.0 1.1 6622564 chr3L 18198930 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821494 intergenic not near genes chr3L_10_21510001 chr3L_21510001 RAL-373_125b 2099 chr3L 18203554 18203604 chr3L 18203699 18203736 6 137 7.0 0.0 3.5 1.3 182 chr3L 18203554 exon CG7320 + chr3L 18203645 intergenic CG7320 + chr3L 18203736 intergenic CG7320 + chr3L_6_18200001 chr3L_18200001 RAL-373_125b 2100 chr3L 18213991 18214004 chr3L 18214145 18214178 5 167 0.0 12.5 6.2 0.7 187 chr3L 18213991 intergenic not near genes chr3L 18214084 intergenic not near genes chr3L 18214178 intergenic not near genes chr3L_5_18210001 chr3L_18210001 RAL-373_125b 2101 chr3L 18223116 18223181 chr3L 18223249 18223311 8 140 3.5 0.0 1.8 2.9 195 chr3L 18223116 intergenic not near genes chr3L 18223214 intergenic not near genes chr3L 18223311 intergenic not near genes chr3L_8_18220001 chr3L_18220001 RAL-373_125b 2102 chr3L 18235442 18235482 chr3L 18235571 18235611 9 124 6.0 5.5 5.8 1.3 169 chr3L 18235442 intergenic not near genes chr3L 18235526 intergenic not near genes chr3L 18235611 intergenic not near genes chr3L_9_18235001 chr3L_18235001 RAL-373_125b 2103 chr3L 18248904 18248972 chr3L 18249052 18249103 6 145 4.0 6.5 5.2 1.0 199 chr3L 18248904 intergenic not near genes chr3L 18249004 intergenic not near genes chr3L 18249103 intergenic not near genes chr3L_6_18245001 chr3L_18245001 RAL-373_125b 2104 chr3L 18301301 18301377 chr3L 18301439 18301516 11 136 0.0 3.5 1.8 3.9 215 chr3L 18301301 intergenic CG13700 - chr3L 18301408 intergenic CG13700 - chr3L 18301516 intergenic CG13700 - chr3L_11_18300001 chr3L_18300001 RAL-373_125b 2105 chr3L 18320573 18320614 chr3L 18320697 18320740 8 122 4.5 1.5 3.0 2.0 167 chr3L 18320573 intergenic not near genes chr3L 18320656 intergenic not near genes chr3L 18320740 intergenic not near genes chr3L_8_18320001 chr3L_18320001 RAL-373_125b 2106 chr3L 18320621 18320638 chr3L 18320695 18320771 10 113 3.0 1.5 2.2 3.1 150 chr3L 18320621 intergenic not near genes chr3L 18320696 intergenic not near genes chr3L 18320771 intergenic not near genes chr3L_10_18320001 chr3L_18320001 RAL-373_125b 2107 chr3L 18343505 18343538 chr3L 18343663 18343681 6 154 2.0 1.0 1.5 2.4 176 chr3L 18343505 intergenic not near genes chr3L 18343593 intergenic not near genes chr3L 18343681 intergenic not near genes chr3L_6_18340001 chr3L_18340001 RAL-373_125b 2108 chr3L 18383415 18383470 chr3L 18383552 18383607 9 134 2.5 5.5 4.0 1.8 192 chr3L 18383415 intergenic not near genes chr3L 18383511 intergenic not near genes chr3L 18383607 intergenic not near genes chr3L_9_18380001 chr3L_18380001 RAL-373_125b 2109 chr3L 18406083 18406151 chr3L 18406209 18406277 17 125 2.5 4.0 3.2 4.0 194 chr3L 18406083 intergenic not near genes chr3L 18406180 intergenic not near genes chr3L 18406277 intergenic not near genes chr3L_17_18405001 chr3L_18405001 RAL-373_125b 2110 chr3L 18408697 18408746 chr3L 18408833 18408882 12 135 4.5 4.0 4.2 2.3 185 chr3L 18408697 intergenic not near genes chr3L 18408790 intergenic not near genes chr3L 18408882 intergenic not near genes chr3L_12_18405001 chr3L_18405001 RAL-373_125b 2111 chr3L 9013689 9013692 chr3L 18417066 18417066 5 9403375 25.5 29.5 27.5 0.2 9403377 chr3L 9013689 intron Doc2 - chr3L 13715378 intron bru-3 - chr3L 18417066 intergenic not near genes chr3L_5_13715001 chr3L_13715001 RAL-373_125b 2112 chr3L 18445203 18445274 chr3L 18445331 18445362 13 118 3.0 4.5 3.8 2.7 159 chr3L 18445203 intergenic not near genes chr3L 18445282 intergenic not near genes chr3L 18445362 intergenic not near genes chr3L_13_18445001 chr3L_18445001 RAL-373_125b 2113 chr3L 18448576 18448619 chr3L 18448718 18448761 7 142 3.5 3.0 3.2 1.7 185 chr3L 18448576 intergenic not near genes chr3L 18448668 intergenic not near genes chr3L 18448761 intergenic not near genes chr3L_7_18445001 chr3L_18445001 RAL-373_125b 2114 chr3L 18456231 18456301 chr3L 18456369 18456439 11 134 6.0 9.5 7.8 1.2 208 chr3L 18456231 intergenic CR44670 - chr3L 18456335 intergenic CR44670 - chr3L 18456439 3` UTR CR44670 - chr3L_11_18455001 chr3L_18455001 RAL-373_125b 2115 chr3L 18506087 18506155 chr3L 18509600 18509668 F-element 14 3512 5.5 8.5 7.0 1.8 3581 chr3L 18506087 intergenic not near genes chr3L 18507878 intergenic not near genes chr3L 18509668 intergenic not near genes chr3L_14_18505001 chr3L_18505001 RAL-373_125b 2116 chr3L 18528585 18528649 chr3L 18537796 18537850 roo 20 9209 4.5 3.5 4.0 4.0 9265 chr3L 18528585 intergenic not near genes chr3L 18533218 intergenic not near genes chr3L 18537850 intergenic not near genes chr3L_20_18530001 chr3L_18530001 RAL-373_125b 2117 chr3L 18546657 18546736 chr3L 18546799 18546875 21 138 2.5 6.0 4.2 4.0 218 chr3L 18546657 intergenic not near genes chr3L 18546766 intergenic not near genes chr3L 18546875 intergenic not near genes chr3L_21_18545001 chr3L_18545001 RAL-373_125b 2118 chr3L 18555060 18555076 chr3L 18555194 18555210 6 134 4.5 5.0 4.8 1.0 150 chr3L 18555060 intergenic not near genes chr3L 18555135 intergenic not near genes chr3L 18555210 intergenic not near genes chr3L_6_18555001 chr3L_18555001 RAL-373_125b 2119 chr3L 18566977 18567050 chr3L 18567113 18567186 18 133 4.0 4.0 4.0 3.6 209 chr3L 18566977 intron AstC-R1 + chr3L 18567082 intron AstC-R1 + chr3L 18567186 intron AstC-R1 + chr3L_18_18565001 chr3L_18565001 RAL-373_125b 2120 chr3L 18579526 18579598 chr3L 18579704 18579766 17 173 2.5 7.0 4.8 2.9 240 chr3L 18579526 intergenic not near genes chr3L 18579646 intergenic not near genes chr3L 18579766 intergenic not near genes chr3L_17_18575001 chr3L_18575001 RAL-373_125b 2121 chr3L 18593902 18593974 chr3L 18595932 18596007 Doc 14 2030 9.0 2.5 5.8 2.1 2105 chr3L 18593902 intergenic term - chr3L 18594954 intergenic not near genes chr3L 18596007 intergenic CR45389 + chr3L_14_18590001 chr3L_18590001 RAL-373_125b 2122 chr3L 18606706 18606738 chr3L 18606954 18606986 9 245 8.0 7.5 7.8 1.0 280 chr3L 18606706 intron,intron,exon CG13380 -,CG4174 -,CG18233 + chr3L 18606846 intron,intron,exon CG13380 -,CG4174 -,CG18233 + chr3L 18606986 intron,intron,exon CG13380 -,CG4174 -,CG18233 + chr3L_9_18605001 chr3L_18605001 RAL-373_125b 2123 chr3L 18606743 18606778 chr3L 18606950 18607026 10 235 2.5 6.0 4.2 1.9 283 chr3L 18606743 intron,intron,exon CG13380 -,CG4174 -,CG18233 + chr3L 18606884 intron,intron,exon CG13380 -,CG4174 -,CG18233 + chr3L 18607026 intron,intron,intron CG13380 -,CG4174 -,CG18233 + chr3L_10_18605001 chr3L_18605001 RAL-373_125b 2124 chr3L 18607837 18607863 chr3L 18607977 18608008 9 144 8.0 4.0 6.0 1.3 171 chr3L 18607837 intron,intron,exon CG13380 -,CG4174 -,CG18231 + chr3L 18607922 intron,intron,intron CG13380 -,CG4174 -,CG18231 + chr3L 18608008 intron,intron,exon CG13380 -,CG4174 -,CG18231 + chr3L_9_18605001 chr3L_18605001 RAL-373_125b 2125 chr3L 18638540 18638603 chr3L 18638684 18638747 13 141 4.0 4.0 4.0 2.6 207 chr3L 18638540 intron MYPT-75D + chr3L 18638644 intron MYPT-75D + chr3L 18638747 intron MYPT-75D + chr3L_13_18635001 chr3L_18635001 RAL-373_125b 2126 chr3L 18656154 18656205 chr3L 18656278 18656340 13 130 5.0 5.5 5.2 2.1 186 chr3L 18656154 intron MYPT-75D + chr3L 18656247 intron MYPT-75D + chr3L 18656340 intron MYPT-75D + chr3L_13_18655001 chr3L_18655001 RAL-373_125b 2127 chr3L 18688127 18688148 chr3L 18688277 18688299 6 147 26.5 22.5 24.5 0.2 172 chr3L 18688127 intergenic not near genes chr3L 18688213 intergenic not near genes chr3L 18688299 intergenic not near genes chr3L_6_18685001 chr3L_18685001 RAL-373_125b 2128 chr3L 18688149 18688160 chr3L 18688269 18688294 7 129 24.5 21.0 22.8 0.3 145 chr3L 18688149 intergenic not near genes chr3L 18688222 intergenic not near genes chr3L 18688294 intergenic not near genes chr3L_7_18685001 chr3L_18685001 RAL-373_125b 2129 chr3L 18679384 18679448 chr3L 18689088 18689152 18 9705 52.0 42.0 47.0 0.4 9768 chr3L 18679384 intergenic not near genes chr3L 18684268 3` UTR Cyp12c1 - chr3L 18689152 intergenic not near genes chr3L_18_18680001 chr3L_18680001 RAL-373_125b 2130 chr3L 18710746 18710784 chr3L 18718746 18718783 Stalker2 11 7999 5.5 4.0 4.8 1.9 8037 chr3L 18710746 intergenic not near genes chr3L 18714764 intergenic not near genes chr3L 18718783 intergenic not near genes chr3L_11_18710001 chr3L_18710001 RAL-373_125b 2131 chr3L 18721744 18721784 chr3L 18721863 18721925 6 136 3.5 2.5 3.0 1.5 181 chr3L 18721744 intergenic CG12477 - chr3L 18721834 intergenic CG12477 - chr3L 18721925 3` UTR CG12477 - chr3L_6_18720001 chr3L_18720001 RAL-373_125b 2132 chr3L 18725225 18725295 chr3L 18725581 18725647 6 350 3.5 4.5 4.0 1.2 422 chr3L 18725225 intergenic not near genes chr3L 18725436 intergenic not near genes chr3L 18725647 intergenic not near genes chr3L_6_18725001 chr3L_18725001 RAL-373_125b 2133 chr3L 18741949 18741966 chr3L 18742085 18742102 5 135 13.0 3.5 8.2 0.5 153 chr3L 18741949 intergenic not near genes chr3L 18742026 intergenic not near genes chr3L 18742102 intergenic not near genes chr3L_5_18740001 chr3L_18740001 RAL-373_125b 2134 chr3L 18772368 18772429 chr3L 18781094 18781160 roo 17 8727 10.0 5.0 7.5 2.0 8792 chr3L 18772368 intron ftz-f1 - chr3L 18776764 intron ftz-f1 - chr3L 18781160 intron ftz-f1 - chr3L_17_18775001 chr3L_18775001 RAL-373_125b 2135 chr3L 18784344 18784406 chr3L 18784483 18784545 17 138 4.5 6.5 5.5 2.6 201 chr3L 18784344 intron ftz-f1 - chr3L 18784444 intron ftz-f1 - chr3L 18784545 intron ftz-f1 - chr3L_17_18780001 chr3L_18780001 RAL-373_125b 2136 chr3L 18797279 18797337 chr3L 18797413 18797471 17 131 3.5 7.5 5.5 2.6 192 chr3L 18797279 intron ftz-f1 - chr3L 18797375 intron ftz-f1 - chr3L 18797471 intron ftz-f1 - chr3L_17_18795001 chr3L_18795001 RAL-373_125b 2137 chr3L 18810134 18810178 chr3L 18810259 18810310 9 131 3.0 0.0 1.5 3.6 176 chr3L 18810134 intron CG14073 - chr3L 18810222 intron CG14073 - chr3L 18810310 intron CG14073 - chr3L_9_18810001 chr3L_18810001 RAL-373_125b 2138 chr3L 18820834 18820836 chr3L 18821063 18821065 4 229 9.0 2.5 5.8 0.6 231 chr3L 18820834 intergenic CG14073 -,HipHop + chr3L 18820950 intergenic HipHop +,CG14073 - chr3L 18821065 intergenic HipHop +,CG14073 - chr3L_4_18820001 chr3L_18820001 RAL-373_125b 2139 chr3L 18820840 18820896 chr3L 18821062 18821125 14 227 2.5 2.5 2.5 4.0 285 chr3L 18820840 intergenic CG14073 -,HipHop + chr3L 18820982 intergenic HipHop +,CG14073 - chr3L 18821125 intergenic HipHop +,CG14073 - chr3L_14_18820001 chr3L_18820001 RAL-373_125b 2140 chr3L 18843830 18843845 chr3L 18843978 18843988 9 146 11.0 6.5 8.8 0.9 158 chr3L 18843830 intron Indy - chr3L 18843909 intron Indy - chr3L 18843988 intron Indy - chr3L_9_18840001 chr3L_18840001 RAL-373_125b 2141 chr3L 18888200 18888269 chr3L 18888333 18888402 17 131 7.5 4.5 6.0 2.4 202 chr3L 18888200 intron CG3961 - chr3L 18888301 intron CG3961 - chr3L 18888402 intron CG3961 - chr3L_17_18885001 chr3L_18885001 RAL-373_125b 2142 chr3L 18924438 18924506 chr3L 18924564 18924632 10 126 2.5 4.5 3.5 2.2 194 chr3L 18924438 intron CG32204 - chr3L 18924535 intron CG32204 - chr3L 18924632 intron CG32204 - chr3L_10_18920001 chr3L_18920001 RAL-373_125b 2143 chr3L 18932237 18932297 chr3L 18932393 18932453 9 156 8.5 5.0 6.8 1.2 216 chr3L 18932237 intron CG32204 - chr3L 18932345 intron CG32204 - chr3L 18932453 intron CG32204 - chr3L_9_18930001 chr3L_18930001 RAL-373_125b 2144 chr3L 18935794 18935844 chr3L 18935933 18935983 10 136 6.0 3.0 4.5 1.8 189 chr3L 18935794 intron CG32204 - chr3L 18935888 intron CG32204 - chr3L 18935983 intron CG32204 - chr3L_10_18935001 chr3L_18935001 RAL-373_125b 2145 chr3L 18944921 18944936 chr3L 18945031 18945056 5 116 6.5 12.5 9.5 0.5 135 chr3L 18944921 intron CG32204 - chr3L 18944988 intron CG32204 - chr3L 18945056 intron CG32204 - chr3L_5_18940001 chr3L_18940001 RAL-373_125b 2146 chr3L 18958552 18958622 chr3L 18958677 18958748 12 126 3.5 3.0 3.2 2.9 196 chr3L 18958552 intergenic not near genes chr3L 18958650 intergenic not near genes chr3L 18958748 intergenic not near genes chr3L_12_18955001 chr3L_18955001 RAL-373_125b 2147 chr3L 19008819 19008851 chr3L 19009192 19009234 jockey 9 384 9.5 8.5 9.0 0.9 415 chr3L 19008819 intron nkd - chr3L 19009026 intron nkd - chr3L 19009234 intron nkd - chr3L_9_19005001 chr3L_19005001 RAL-373_125b 2148 chr3L 19029410 19029474 chr3L 19029556 19029626 15 141 7.0 8.0 7.5 1.8 216 chr3L 19029410 intron nkd - chr3L 19029518 intron nkd - chr3L 19029626 intron nkd - chr3L_15_19025001 chr3L_19025001 RAL-373_125b 2149 chr3L 19081987 19082064 chr3L 19082138 19082191 24 144 5.0 4.5 4.8 4.1 204 chr3L 19081987 intron Mkp3 - chr3L 19082089 intron Mkp3 - chr3L 19082191 intron Mkp3 - chr3L_24_19080001 chr3L_19080001 RAL-373_125b 2150 chr3L 19101677 19101741 chr3L 19102099 19102152 10 421 0.0 3.5 1.8 3.6 475 chr3L 19101677 intergenic not near genes chr3L 19101914 intergenic not near genes chr3L 19102152 intergenic not near genes chr3L_10_19100001 chr3L_19100001 RAL-373_125b 2151 chr3L 19111316 19111356 chr3L 19111453 19111483 8 134 7.5 7.0 7.2 1.0 167 chr3L 19111316 intron CG14082 - chr3L 19111400 intron CG14082 - chr3L 19111483 intron CG14082 - chr3L_8_19110001 chr3L_19110001 RAL-373_125b 2152 chr3L 19115599 19115671 chr3L 19115827 19115874 BS 23 216 5.0 6.5 5.8 3.4 275 chr3L 19115599 intron CG14082 - chr3L 19115736 intron CG14082 - chr3L 19115874 intron CG14082 - chr3L_23_19115001 chr3L_19115001 RAL-373_125b 2153 chr3L 19117008 19117014 chr3L 19124494 19124511 mdg1 4 7494 13.0 2.5 7.8 0.5 7503 chr3L 19117008 intron CG14082 - chr3L 19120760 intron CG14082 - chr3L 19124511 intron CG14082 - chr3L_4_19120001 chr3L_19120001 RAL-373_125b 2154 chr3L 19117021 19117073 chr3L 19124490 19124545 mdg1 20 7486 6.0 2.0 4.0 4.0 7524 chr3L 19117021 intron CG14082 - chr3L 19120783 intron CG14082 - chr3L 19124545 intron CG14082 - chr3L_20_19120001 chr3L_19120001 RAL-373_125b 2155 chr3L 19138514 19138588 chr3L 19138639 19138690 14 119 4.5 6.5 5.5 2.2 176 chr3L 19138514 intron CG14082 - chr3L 19138602 intron CG14082 - chr3L 19138690 intron CG14082 - chr3L_14_19135001 chr3L_19135001 RAL-373_125b 2156 chr3L 19182349 19182414 chr3L 19182470 19182529 13 125 2.5 4.0 3.2 3.1 180 chr3L 19182349 intron fz2 - chr3L 19182439 intron fz2 - chr3L 19182529 intron fz2 - chr3L_13_19180001 chr3L_19180001 RAL-373_125b 2157 chr3L 19208016 19208032 chr3L 19209440 19209451 Doc 8 1423 11.0 4.5 7.8 0.9 1435 chr3L 19208016 intron fz2 - chr3L 19208734 intron fz2 - chr3L 19209451 intron fz2 - chr3L_8_19205001 chr3L_19205001 RAL-373_125b 2158 chr3L 19208033 19208083 chr3L 19209437 19209492 Doc 11 1411 4.5 4.0 4.2 2.1 1459 chr3L 19208033 intron fz2 - chr3L 19208762 intron fz2 - chr3L 19209492 intron fz2 - chr3L_11_19205001 chr3L_19205001 RAL-373_125b 2159 chr3L 19220634 19220634 chr3L 22908066 22908067 11 3687432 22.0 25.0 23.5 0.4 3687433 chr3L 19220634 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_11_21060001 chr3L_21060001 RAL-373_125b 2160 chr3L 19220635 19220635 chr3L 22908066 22908067 6 3687431 21.5 25.0 23.2 0.2 3687432 chr3L 19220635 intron fz2 - chr3L 21064351 intron siz + chr3L 22908067 intergenic not near genes chr3L_6_21060001 chr3L_21060001 RAL-373_125b 2161 chr3L 19220636 19220636 chr3L 22908066 22908067 6 3687430 21.0 25.0 23.0 0.2 3687431 chr3L 19220636 intron fz2 - chr3L 21064352 intron siz + chr3L 22908067 intergenic not near genes chr3L_6_21060001 chr3L_21060001 RAL-373_125b 2162 chr3L 19220637 19220637 chr3L 22908066 22908066 6 3687429 20.5 25.0 22.8 0.3 3687429 chr3L 19220637 intron fz2 - chr3L 21064352 intron siz + chr3L 22908066 intergenic not near genes chr3L_6_21060001 chr3L_21060001 RAL-373_125b 2163 chr3L 19223306 19223339 chr3L 19223447 19223492 5 144 12.0 0.0 6.0 0.7 186 chr3L 19223306 intron fz2 - chr3L 19223399 intron fz2 - chr3L 19223492 intron fz2 - chr3L_5_19220001 chr3L_19220001 RAL-373_125b 2164 chr3L 19244062 19244139 chr3L 19244190 19244241 25 120 5.5 3.0 4.2 4.8 179 chr3L 19244062 intergenic not near genes chr3L 19244152 intergenic not near genes chr3L 19244241 intergenic not near genes chr3L_25_19240001 chr3L_19240001 RAL-373_125b 2165 chr3L 19282220 19282295 chr3L 19282366 19282416 19 144 3.0 8.0 5.5 2.9 196 chr3L 19282220 3` UTR Gbs-76A - chr3L 19282318 3` UTR Gbs-76A - chr3L 19282416 3` UTR Gbs-76A - chr3L_19_19280001 chr3L_19280001 RAL-373_125b 2166 chr3L 19342721 19342754 chr3L 19342862 19342895 8 141 8.0 3.5 5.8 1.2 174 chr3L 19342721 3` UTR CG32206 - chr3L 19342808 3` UTR CG32206 - chr3L 19342895 3` UTR CG32206 - chr3L_8_19340001 chr3L_19340001 RAL-373_125b 2167 chr3L 19346825 19346879 chr3L 19346960 19347002 5 132 0.5 7.0 3.8 1.0 177 chr3L 19346825 intron CG32206 - chr3L 19346914 intron CG32206 - chr3L 19347002 intron CG32206 - chr3L_5_19345001 chr3L_19345001 RAL-373_125b 2168 chr3L 19398901 19398931 chr3L 19403658 19403693 F-element 9 4759 5.0 3.5 4.2 1.7 4792 chr3L 19398901 intron CG32206 - chr3L 19401297 intron CG32206 - chr3L 19403693 intron CG32206 - chr3L_9_19400001 chr3L_19400001 RAL-373_125b 2169 chr3L 19417763 19417823 chr3L 19417893 19417948 11 124 8.0 6.0 7.0 1.4 185 chr3L 19417763 intergenic not near genes chr3L 19417856 intergenic not near genes chr3L 19417948 intergenic not near genes chr3L_11_19415001 chr3L_19415001 RAL-373_125b 2170 chr3L 19426712 19426776 chr3L 19426837 19426882 15 117 9.0 7.5 8.2 1.6 170 chr3L 19426712 intergenic not near genes chr3L 19426797 intergenic not near genes chr3L 19426882 intergenic not near genes chr3L_15_19425001 chr3L_19425001 RAL-373_125b 2171 chr3L 19430373 19430423 chr3L 19430491 19430540 11 125 4.5 3.5 4.0 2.2 167 chr3L 19430373 intergenic not near genes chr3L 19430456 intergenic not near genes chr3L 19430540 intergenic not near genes chr3L_11_19430001 chr3L_19430001 RAL-373_125b 2172 chr3L 19439215 19439238 chr3L 19439354 19439377 5 139 9.5 6.0 7.8 0.6 162 chr3L 19439215 intergenic not near genes chr3L 19439296 intergenic not near genes chr3L 19439377 intergenic not near genes chr3L_5_19435001 chr3L_19435001 RAL-373_125b 2173 chr3L 19488479 19488499 chr3L 19488611 19488626 6 131 4.0 10.0 7.0 0.8 147 chr3L 19488479 intergenic pncr009:3L -,CG32212 + chr3L 19488552 intergenic pncr009:3L -,CG32212 + chr3L 19488626 intergenic pncr009:3L -,CG32212 + chr3L_6_19485001 chr3L_19485001 RAL-373_125b 2174 chr3L 19544190 19544240 chr3L 19544316 19544356 6 122 10.0 8.5 9.2 0.6 166 chr3L 19544190 intergenic CG9279 -,l(3)76BDr - chr3L 19544273 intergenic l(3)76BDr -,CG9279 - chr3L 19544356 3` UTR l(3)76BDr - chr3L_6_19540001 chr3L_19540001 RAL-373_125b 2175 chr3L 19703811 19703873 chr3L 19704009 19704077 20 201 7.5 5.5 6.5 2.7 266 chr3L 19703811 intron serp - chr3L 19703944 intron serp - chr3L 19704077 intron serp - chr3L_20_19700001 chr3L_19700001 RAL-373_125b 2176 chr3L 19820260 19820317 chr3L 19827859 19827916 412 10 7599 2.5 7.0 4.8 1.7 7656 chr3L 19820260 intron Deaf1 + chr3L 19824088 intron Deaf1 + chr3L 19827916 intron Deaf1 + chr3L_10_19820001 chr3L_19820001 RAL-373_125b 2177 chr3L 19848489 19848521 chr3L 19857719 19857762 roo 6 9238 6.0 9.5 7.8 0.7 9273 chr3L 19848489 intron Papss + chr3L 19853126 intron Papss + chr3L 19857762 intron Papss + chr3L_6_19850001 chr3L_19850001 RAL-373_125b 2178 chr3L 19861794 19861841 chr3L 19863632 19863638 S-element 13 1832 8.0 4.5 6.2 1.8 1844 chr3L 19861794 5` UTR CR45433 + chr3L 19862716 intergenic not near genes chr3L 19863638 intergenic not near genes chr3L_13_19860001 chr3L_19860001 RAL-373_125b 2179 chr3L 19933488 19933562 chr3L 19934360 19934434 14 871 3.0 4.0 3.5 3.1 946 chr3L 19933488 intergenic CR45678 + chr3L 19933961 5` UTR CR45678 + chr3L 19934434 intergenic CR45678 + chr3L_14_19930001 chr3L_19930001 RAL-373_125b 2180 chr3L 19959848 19959907 chr3L 19960337 19960371 12 480 6.5 2.5 4.5 2.2 523 chr3L 19959848 intron Ac76E + chr3L 19960110 intron Ac76E + chr3L 19960371 intron Ac76E + chr3L_12_19960001 chr3L_19960001 RAL-373_125b 2181 chr3L 20081697 20081769 chr3L 20081830 20081892 17 131 3.5 6.0 4.8 2.9 195 chr3L 20081697 intron sNPF-R - chr3L 20081794 intron sNPF-R - chr3L 20081892 intron sNPF-R - chr3L_17_20080001 chr3L_20080001 RAL-373_125b 2182 chr3L 20096231 20096281 chr3L 20096378 20096439 14 152 3.0 4.5 3.8 2.9 208 chr3L 20096231 intergenic not near genes chr3L 20096335 intergenic not near genes chr3L 20096439 intergenic not near genes chr3L_14_20095001 chr3L_20095001 RAL-373_125b 2183 chr3L 20113622 20113677 chr3L 20122924 20122984 roo 20 9306 4.5 4.5 4.5 3.6 9362 chr3L 20113622 intergenic not near genes chr3L 20118303 intergenic not near genes chr3L 20122984 intergenic not near genes chr3L_20_20115001 chr3L_20115001 RAL-373_125b 2184 chr3L 20143044 20143102 chr3L 20143169 20143232 14 128 7.0 7.0 7.0 1.8 188 chr3L 20143044 intergenic not near genes chr3L 20143138 intergenic not near genes chr3L 20143232 intergenic not near genes chr3L_14_20140001 chr3L_20140001 RAL-373_125b 2185 chr3L 20150685 20150749 chr3L 20150866 20150929 15 178 4.0 7.5 5.8 2.2 244 chr3L 20150685 3` UTR CG42674 - chr3L 20150807 3` UTR CG42674 - chr3L 20150929 3` UTR CG42674 - chr3L_15_20150001 chr3L_20150001 RAL-373_125b 2186 chr3L 20212561 20212579 chr3L 20218188 20218206 mdg3 10 5626 11.0 0.0 5.5 1.5 5645 chr3L 20212561 intergenic CG7017 - chr3L 20215384 intergenic not near genes chr3L 20218206 intergenic CG6933 - chr3L_10_20215001 chr3L_20215001 RAL-373_125b 2187 chr3L 20218182 20218218 chr3L 20218347 20218384 9 165 0.0 8.5 4.2 1.7 202 chr3L 20218182 intergenic CG6933 - chr3L 20218283 intergenic CG6933 - chr3L 20218384 intergenic CG6933 - chr3L_9_20215001 chr3L_20215001 RAL-373_125b 2188 chr3L 20254989 20255032 chr3L 20255107 20255161 15 123 11.0 7.0 9.0 1.5 172 chr3L 20254989 intron rdgC + chr3L 20255075 intron rdgC + chr3L 20255161 intron rdgC + chr3L_15_20255001 chr3L_20255001 RAL-373_125b 2189 chr3L 20257292 20257360 chr3L 20258463 20258526 pogo 11 1167 5.0 12.5 8.8 1.1 1234 chr3L 20257292 intron rdgC + chr3L 20257909 intron rdgC + chr3L 20258526 intron rdgC + chr3L_11_20255001 chr3L_20255001 RAL-373_125b 2190 chr3L 20262754 20262826 chr3L 20262916 20262978 27 155 2.0 5.0 3.5 6.0 224 chr3L 20262754 exon rdgC + chr3L 20262866 intron rdgC + chr3L 20262978 intron rdgC + chr3L_27_20260001 chr3L_20260001 RAL-373_125b 2191 chr3L 20386890 20386972 chr3L 20387042 20387124 18 150 4.0 5.0 4.5 3.3 234 chr3L 20386890 intron fbl + chr3L 20387007 intron fbl + chr3L 20387124 intron fbl + chr3L_18_20385001 chr3L_20385001 RAL-373_125b 2192 chr3L 20394466 20394539 chr3L 20394600 20394666 23 132 7.5 9.5 8.5 2.4 200 chr3L 20394466 intergenic not near genes chr3L 20394566 intergenic not near genes chr3L 20394666 intergenic not near genes chr3L_23_20390001 chr3L_20390001 RAL-373_125b 2193 chr3L 20402155 20402219 chr3L 20402286 20402350 19 131 3.5 4.0 3.8 4.0 195 chr3L 20402155 intergenic not near genes chr3L 20402252 intergenic not near genes chr3L 20402350 intergenic not near genes chr3L_19_20400001 chr3L_20400001 RAL-373_125b 2194 chr3L 20403529 20403597 chr3L 20403674 20403742 17 142 10.0 5.0 7.5 2.0 213 chr3L 20403529 intergenic not near genes chr3L 20403636 intergenic not near genes chr3L 20403742 intergenic not near genes chr3L_17_20400001 chr3L_20400001 RAL-373_125b 2195 chr3L 20462536 20462569 chr3L 20462667 20462696 7 129 8.0 0.0 4.0 1.4 160 chr3L 20462536 intron atk - chr3L 20462616 intron atk - chr3L 20462696 intron atk - chr3L_7_20460001 chr3L_20460001 RAL-373_125b 2196 chr3L 20463731 20463791 chr3L 20464003 20464063 20 270 7.0 5.0 6.0 2.9 332 chr3L 20463731 intron atk - chr3L 20463897 intron atk - chr3L 20464063 intron atk - chr3L_20_20460001 chr3L_20460001 RAL-373_125b 2197 chr3L 20476714 20476773 chr3L 20484363 20484422 springer 17 7648 7.5 8.5 8.0 1.9 7708 chr3L 20476714 3` UTR isoQC + chr3L 20480568 intergenic not near genes chr3L 20484422 3` UTR ZnT77C - chr3L_17_20480001 chr3L_20480001 RAL-373_125b 2198 chr3L 20590023 20590044 chr3L 20590612 20590623 412 5 584 8.5 4.0 6.2 0.7 600 chr3L 20590023 intergenic not near genes chr3L 20590323 intergenic not near genes chr3L 20590623 intergenic not near genes chr3L_5_20590001 chr3L_20590001 RAL-373_125b 2199 chr3L 20590051 20590086 chr3L 20590601 20590674 412 7 579 4.0 4.0 4.0 1.4 623 chr3L 20590051 intergenic not near genes chr3L 20590362 intergenic not near genes chr3L 20590674 intergenic not near genes chr3L_7_20590001 chr3L_20590001 RAL-373_125b 2200 chr3L 20739486 20739499 chr3L 20739651 20739664 5 165 4.5 8.5 6.5 0.7 178 chr3L 20739486 intron CG13252 + chr3L 20739575 intron CG13252 + chr3L 20739664 intron CG13252 + chr3L_5_20735001 chr3L_20735001 RAL-373_125b 2201 chr3L 20747400 20747436 chr3L 20747508 20747563 13 131 7.0 8.0 7.5 1.5 163 chr3L 20747400 intergenic not near genes chr3L 20747482 intergenic not near genes chr3L 20747563 intergenic not near genes chr3L_13_20745001 chr3L_20745001 RAL-373_125b 2202 chr3L 20858039 20858082 chr3L 20858188 20858231 10 148 2.0 3.5 2.8 2.6 192 chr3L 20858039 intron CG32432 - chr3L 20858135 intron CG32432 - chr3L 20858231 intron CG32432 - chr3L_10_20855001 chr3L_20855001 RAL-373_125b 2203 chr3L 20898982 20899015 chr3L 20899118 20899153 5 132 11.0 7.0 9.0 0.5 171 chr3L 20898982 intergenic CG43931 + chr3L 20899068 intergenic not near genes chr3L 20899153 intergenic not near genes chr3L_5_20895001 chr3L_20895001 RAL-373_125b 2204 chr3L 21010326 21010396 chr3L 21010483 21010554 15 154 7.0 8.0 7.5 1.8 228 chr3L 21010326 intron skd - chr3L 21010440 intron skd - chr3L 21010554 intron skd - chr3L_15_21010001 chr3L_21010001 RAL-373_125b 2205 chr3L 21014898 21014947 chr3L 21023399 21023444 Tirant 19 8517 5.5 4.0 4.8 3.3 8546 chr3L 21014898 intron skd - chr3L 21019171 intron skd - chr3L 21023444 intron skd - chr3L_19_21015001 chr3L_21015001 RAL-373_125b 2206 chr3L 21040328 21040372 chr3L 21040827 21040869 13 502 3.5 6.0 4.8 2.2 541 chr3L 21040328 intron siz + chr3L 21040598 intron siz + chr3L 21040869 intron siz + chr3L_13_21040001 chr3L_21040001 RAL-373_125b 2207 chr3L 21082167 21082234 chr3L 21082289 21082346 17 124 5.0 4.0 4.5 3.1 179 chr3L 21082167 intron ko - chr3L 21082256 intron ko - chr3L 21082346 intron ko - chr3L_17_21080001 chr3L_21080001 RAL-373_125b 2208 chr3L 21091620 21091681 chr3L 21091768 21091824 12 145 7.0 4.5 5.8 1.8 204 chr3L 21091620 intron ko - chr3L 21091722 intron ko - chr3L 21091824 intron ko - chr3L_12_21090001 chr3L_21090001 RAL-373_125b 2209 chr3L 21151831 21151881 chr3L 21156955 21157015 flea 18 5129 7.0 4.0 5.5 2.8 5184 chr3L 21151831 intron Ac78C - chr3L 21154423 intron Ac78C - chr3L 21157015 intron Ac78C - chr3L_18_21150001 chr3L_21150001 RAL-373_125b 2210 chr3L 21163198 21163274 chr3L 21163325 21163365 7 116 3.5 6.5 5.0 1.2 167 chr3L 21163198 intron Ac78C - chr3L 21163282 intron Ac78C - chr3L 21163365 intron Ac78C - chr3L_7_21160001 chr3L_21160001 RAL-373_125b 2211 chr3L 21229139 21229204 chr3L 21229275 21229341 19 135 5.0 7.0 6.0 2.7 202 chr3L 21229139 intron Eip78C + chr3L 21229240 intron Eip78C + chr3L 21229341 intron Eip78C + chr3L_19_21225001 chr3L_21225001 RAL-373_125b 2212 chr3L 21233419 21233440 chr3L 21233616 21233637 4 196 6.5 11.0 8.8 0.4 218 chr3L 21233419 intron Eip78C + chr3L 21233528 intron Eip78C + chr3L 21233637 intron Eip78C + chr3L_4_21230001 chr3L_21230001 RAL-373_125b 2213 chr3L 21236584 21236661 chr3L 21236720 21236781 17 129 6.5 5.5 6.0 2.4 197 chr3L 21236584 intron Eip78C + chr3L 21236682 intron Eip78C + chr3L 21236781 intron Eip78C + chr3L_17_21235001 chr3L_21235001 RAL-373_125b 2214 chr3L 21295726 21295798 chr3L 21296190 21296268 14 466 2.0 5.0 3.5 3.1 542 chr3L 21295726 exon Cpr78Cb + chr3L 21295997 exon Cpr78Cb + chr3L 21296268 3` UTR Cpr78Cb + chr3L_14_21295001 chr3L_21295001 RAL-373_125b 2215 chr3L 21301700 21301704 chr3L 21301829 21301840 6 132 14.0 11.5 12.8 0.4 140 chr3L 21301700 5` UTR CR45432 + chr3L 21301770 5` UTR CR45432 + chr3L 21301840 5` UTR,3` UTR CR45432 +,CG11309 - chr3L_6_21300001 chr3L_21300001 RAL-373_125b 2216 chr3L 21301708 21301753 chr3L 21301824 21301888 20 131 6.5 9.5 8.0 2.2 180 chr3L 21301708 5` UTR CR45432 + chr3L 21301798 5` UTR,3` UTR CR45432 +,CG11309 - chr3L 21301888 5` UTR,3` UTR CR45432 +,CG11309 - chr3L_20_21300001 chr3L_21300001 RAL-373_125b 2217 chr3L 21306110 21306170 chr3L 21315309 21315372 roo 21 9207 5.0 3.5 4.2 4.0 9262 chr3L 21306110 3` UTR CG7632 + chr3L 21310741 intron Pc - chr3L 21315372 3` UTR Pc - chr3L_21_21310001 chr3L_21310001 RAL-373_125b 2218 chr3L 21319487 21319552 chr3L 21319621 21319687 25 135 6.5 3.0 4.8 4.3 200 chr3L 21319487 5` UTR Rab26 + chr3L 21319587 5` UTR Rab26 + chr3L 21319687 5` UTR Rab26 + chr3L_25_21315001 chr3L_21315001 RAL-373_125b 2219 chr3L 21361680 21361746 chr3L 21362684 21362750 G2 16 1003 5.0 5.5 5.2 2.6 1070 chr3L 21361680 intergenic CG32440 + chr3L 21362215 intergenic not near genes chr3L 21362750 intergenic not near genes chr3L_16_21360001 chr3L_21360001 RAL-373_125b 2220 chr3L 21362803 21362866 chr3L 21362937 21363000 23 131 3.5 0.5 2.0 7.7 197 chr3L 21362803 intergenic not near genes chr3L 21362902 intergenic not near genes chr3L 21363000 intergenic not near genes chr3L_23_21360001 chr3L_21360001 RAL-373_125b 2221 chr3L 21372675 21372751 chr3L 21379233 21379308 McClintock 14 6557 4.0 2.0 3.0 3.5 6633 chr3L 21372675 intergenic not near genes chr3L 21375992 intergenic not near genes chr3L 21379308 intergenic not near genes chr3L_14_21375001 chr3L_21375001 RAL-373_125b 2222 chr3L 21395107 21395164 chr3L 21395240 21395302 16 133 4.0 7.5 5.8 2.4 195 chr3L 21395107 intron rgn + chr3L 21395204 intron rgn + chr3L 21395302 intron rgn + chr3L_16_21395001 chr3L_21395001 RAL-373_125b 2223 chr3L 21406951 21407010 chr3L 21407080 21407129 6 126 6.0 8.5 7.2 0.7 178 chr3L 21406951 intron rgn + chr3L 21407040 intron rgn + chr3L 21407129 intron rgn + chr3L_6_21405001 chr3L_21405001 RAL-373_125b 2224 chr3L 21415096 21415163 chr3L 21415220 21415235 6 121 13.0 15.5 14.2 0.4 139 chr3L 21415096 intron rgn + chr3L 21415166 intron rgn + chr3L 21415235 intron rgn + chr3L_6_21415001 chr3L_21415001 RAL-373_125b 2225 chr3L 21498835 21498865 chr3L 21500503 21500503 1360 5 1667 6.5 12.5 9.5 0.5 1668 chr3L 21498835 intron Glg1 - chr3L 21499669 intron Glg1 - chr3L 21500503 intron Glg1 - chr3L_5_21495001 chr3L_21495001 RAL-373_125b 2226 chr3L 21501130 21501160 chr3L 21501274 21501304 1360 6 143 8.5 14.0 11.2 0.5 174 chr3L 21501130 intron Glg1 - chr3L 21501217 intron Glg1 - chr3L 21501304 intron Glg1 - chr3L_6_21500001 chr3L_21500001 RAL-373_125b 2227 chr3L 21639152 21639214 chr3L 21639288 21639343 18 125 4.5 5.5 5.0 3.0 191 chr3L 21639152 intergenic CG32444 +,CG32445 + chr3L 21639248 intergenic CG32445 +,CG32444 + chr3L 21639343 intergenic CG32445 +,CG32444 + chr3L_18_21635001 chr3L_21635001 RAL-373_125b 2228 chr3L 21656950 21657018 chr3L 21657093 21657161 8 141 16.0 14.0 15.0 0.5 211 chr3L 21656950 intron CG43980 + chr3L 21657056 intron CG43980 + chr3L 21657161 intron CG43980 + chr3L_8_21655001 chr3L_21655001 RAL-373_125b 2229 chr3L 21659570 21659590 chr3L 21659750 21659770 INE-1 6 179 14.0 20.0 17.0 0.3 200 chr3L 21659570 intron CG43980 + chr3L 21659670 intron CG43980 + chr3L 21659770 intron CG43980 + chr3L_6_21655001 chr3L_21655001 RAL-373_125b 2230 chr3L 21712132 21712193 chr3L 21712255 21712301 4 112 15.0 11.0 13.0 0.3 169 chr3L 21712132 intergenic not near genes chr3L 21712216 intergenic not near genes chr3L 21712301 intergenic not near genes chr3L_4_21710001 chr3L_21710001 RAL-373_125b 2231 chr3L 21738580 21738636 chr3L 21738716 21738778 12 136 15.0 17.5 16.2 0.7 198 chr3L 21738580 intergenic CG14567 - chr3L 21738679 intergenic CG14567 - chr3L 21738778 intergenic CG14567 - chr3L_12_21735001 chr3L_21735001 RAL-373_125b 2232 chr3L 21749291 21749342 chr3L 21754491 21754536 Doc 9 5200 3.5 8.0 5.8 1.3 5245 chr3L 21749291 intron Syn1 - chr3L 21751914 intron Syn1 - chr3L 21754536 intron Syn1 - chr3L_9_21750001 chr3L_21750001 RAL-373_125b 2233 chr3L 21766876 21766956 chr3L 21767207 21767276 27 323 3.5 4.5 4.0 5.4 400 chr3L 21766876 intron Syn1 - chr3L 21767076 intron Syn1 - chr3L 21767276 intron Syn1 - chr3L_27_21765001 chr3L_21765001 RAL-373_125b 2234 chr3L 21770007 21770039 chr3L 21770128 21770174 7 132 7.5 5.0 6.2 1.0 167 chr3L 21770007 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L 21770090 5` UTR,intron,intron Syn1 -,CG42689 +,CG7370 + chr3L 21770174 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L_7_21770001 chr3L_21770001 RAL-373_125b 2235 chr3L 21806602 21806673 chr3L 21806803 21806818 9 193 9.5 15.5 12.5 0.7 216 chr3L 21806602 intergenic not near genes chr3L 21806710 intergenic not near genes chr3L 21806818 intergenic not near genes chr3L_9_21805001 chr3L_21805001 RAL-373_125b 2236 chr3L 21840796 21840845 chr3L 21840970 21841019 5 173 14.5 12.5 13.5 0.3 223 chr3L 21840796 intron P5CDh1 - chr3L 21840908 intron P5CDh1 - chr3L 21841019 intron P5CDh1 - chr3L_5_21840001 chr3L_21840001 RAL-373_125b 2237 chr3L 21872406 21872436 chr3L 21872535 21872555 7 127 14.0 18.0 16.0 0.4 149 chr3L 21872406 intron mub + chr3L 21872480 intron mub + chr3L 21872555 intron mub + chr3L_7_21870001 chr3L_21870001 RAL-373_125b 2238 chr3L 21950282 21950353 chr3L 21950409 21950468 14 123 10.5 11.5 11.0 1.2 186 chr3L 21950282 exon CG7448 + chr3L 21950375 exon CG7448 + chr3L 21950468 exon CG7448 + chr3L_14_21950001 chr3L_21950001 RAL-373_125b 2239 chr3L 21975631 21975697 chr3L 21975915 21975981 9 280 17.0 15.0 16.0 0.5 350 chr3L 21975631 intron CG7470 + chr3L 21975806 intron CG7470 + chr3L 21975981 intron CG7470 + chr3L_9_21975001 chr3L_21975001 RAL-373_125b 2240 chr3L 22008812 22008821 chr3L 22008938 22008948 5 125 15.0 14.0 14.5 0.3 136 chr3L 22008812 intergenic not near genes chr3L 22008880 intergenic not near genes chr3L 22008948 intergenic not near genes chr3L_5_22005001 chr3L_22005001 RAL-373_125b 2241 chr3L 22008825 22008866 chr3L 22008935 22008988 4 114 11.5 13.5 12.5 0.3 163 chr3L 22008825 intergenic not near genes chr3L 22008906 intergenic not near genes chr3L 22008988 intergenic not near genes chr3L_4_22005001 chr3L_22005001 RAL-373_125b 2242 chr3L 22069671 22069740 chr3L 22070391 22070460 5 721 17.5 17.5 17.5 0.3 789 chr3L 22069671 exon CG7139 - chr3L 22070066 exon CG7139 - chr3L 22070460 intron CG7139 - chr3L_5_22070001 chr3L_22070001 RAL-373_125b 2243 chr3L 22099638 22099694 chr3L 22105874 22105923 3S18 13 6231 6.5 4.5 5.5 2.0 6285 chr3L 22099638 intergenic not near genes chr3L 22102780 intergenic not near genes chr3L 22105923 intergenic not near genes chr3L_13_22100001 chr3L_22100001 RAL-373_125b 2244 chr3L 22124762 22124966 chr3L 22124895 22125172 22 166 13.0 13.0 13.0 1.6 410 chr3L 22124762 intergenic not near genes chr3L 22124967 intergenic not near genes chr3L 22125172 intergenic not near genes chr3L_22_22120001 chr3L_22120001 RAL-373_125b 2245 chr3L 22130452 22130522 chr3L 22130648 22130718 18 194 4.5 4.5 4.5 3.3 266 chr3L 22130452 intergenic not near genes chr3L 22130585 intergenic not near genes chr3L 22130718 intergenic not near genes chr3L_18_22130001 chr3L_22130001 RAL-373_125b 2246 chr3L 22152147 22152190 chr3L 22152275 22152312 4 128 14.0 15.0 14.5 0.3 165 chr3L 22152147 intron olf413 + chr3L 22152230 intron olf413 + chr3L 22152312 intron olf413 + chr3L_4_22150001 chr3L_22150001 RAL-373_125b 2247 chr3L 22179090 22179118 chr3L 22179186 22179228 6 110 6.0 8.0 7.0 0.8 138 chr3L 22179090 intron olf413 + chr3L 22179159 intron olf413 + chr3L 22179228 intron olf413 + chr3L_6_22175001 chr3L_22175001 RAL-373_125b 2248 chr3L 22194284 22194313 chr3L 22194417 22194440 9 130 6.5 9.5 8.0 1.0 156 chr3L 22194284 intron olf413 + chr3L 22194362 intron olf413 + chr3L 22194440 intron olf413 + chr3L_9_22190001 chr3L_22190001 RAL-373_125b 2249 chr3L 22392363 22392426 chr3L 22394772 22394834 7 2411 8.5 16.5 12.5 0.5 2471 chr3L 22392363 intron Ten-m - chr3L 22393598 intron Ten-m - chr3L 22394834 intron Ten-m - chr3L_7_22390001 chr3L_22390001 RAL-373_125b 2250 chr3L 22411359 22411397 chr3L 22411450 22411492 14 104 7.5 6.0 6.8 1.8 133 chr3L 22411359 intergenic not near genes chr3L 22411426 intergenic not near genes chr3L 22411492 intergenic not near genes chr3L_14_22410001 chr3L_22410001 RAL-373_125b 2251 chr3L 22445279 22445355 chr3L 22445885 22445967 9 608 18.5 13.5 16.0 0.5 688 chr3L 22445279 intergenic not near genes chr3L 22445623 intergenic not near genes chr3L 22445967 intergenic not near genes chr3L_9_22445001 chr3L_22445001 RAL-373_125b 2252 chr3L 22447156 22447223 chr3L 22447297 22447364 17 137 6.5 9.5 8.0 1.9 208 chr3L 22447156 intergenic not near genes chr3L 22447260 intergenic not near genes chr3L 22447364 intergenic not near genes chr3L_17_22445001 chr3L_22445001 RAL-373_125b 2253 chr3L 22543043 22543095 chr3L 22543170 22543221 18 125 7.5 10.5 9.0 1.8 178 chr3L 22543043 intergenic not near genes chr3L 22543132 intergenic not near genes chr3L 22543221 intergenic not near genes chr3L_18_22540001 chr3L_22540001 RAL-373_125b 2254 chr3L 22543684 22543754 chr3L 22543811 22543881 24 124 6.5 11.5 9.0 2.4 197 chr3L 22543684 intergenic not near genes chr3L 22543782 intergenic not near genes chr3L 22543881 intergenic not near genes chr3L_24_22540001 chr3L_22540001 RAL-373_125b 2255 chr3L 22555735 22555787 chr3L 22563244 22563286 blood 14 7513 6.5 4.5 5.5 2.2 7551 chr3L 22555735 intergenic not near genes chr3L 22559510 intergenic not near genes chr3L 22563286 intergenic not near genes chr3L_14_22555001 chr3L_22555001 RAL-373_125b 2256 chr3L 22570381 22570450 chr3L 22570570 22570644 31 191 7.0 5.0 6.0 4.4 263 chr3L 22570381 intergenic not near genes chr3L 22570512 intergenic not near genes chr3L 22570644 intergenic not near genes chr3L_31_22570001 chr3L_22570001 RAL-373_125b 2257 chr3L 22577598 22577645 chr3L 22582420 22582463 Doc 19 4826 5.5 5.5 5.5 2.9 4865 chr3L 22577598 intergenic not near genes chr3L 22580030 intergenic not near genes chr3L 22582463 3` UTR CG14459 - chr3L_19_22580001 chr3L_22580001 RAL-373_125b 2258 chr3L 22617147 22617166 chr3L 22624649 22624668 blood 7 7502 11.5 8.0 9.8 0.6 7521 chr3L 22617147 intron CG14459 - chr3L 22620908 intron CG14459 - chr3L 22624668 intron CG14459 - chr3L_7_22620001 chr3L_22620001 RAL-373_125b 2259 chr3L 22617167 22617215 chr3L 22624648 22624712 blood 16 7494 6.0 8.0 7.0 2.0 7545 chr3L 22617167 intron CG14459 - chr3L 22620940 intron CG14459 - chr3L 22624712 intron CG14459 - chr3L_16_22620001 chr3L_22620001 RAL-373_125b 2260 chr3L 22630700 22630763 chr3L 22630823 22630892 13 121 2.0 3.0 2.5 3.7 192 chr3L 22630700 intron CG14459 - chr3L 22630796 intron CG14459 - chr3L 22630892 intron CG14459 - chr3L_13_22630001 chr3L_22630001 RAL-373_125b 2261 chr3L 22652287 22652351 chr3L 22652475 22652529 16 184 8.5 8.0 8.2 1.7 242 chr3L 22652287 exon CG33772 - chr3L 22652408 intron CG33772 - chr3L 22652529 intergenic CG33772 - chr3L_16_22650001 chr3L_22650001 RAL-373_125b 2262 chr3L 22761354 22761406 chr3L 22766832 22766885 Ivk 17 5480 7.5 9.0 8.2 1.8 5531 chr3L 22761354 intron SPoCk + chr3L 22764120 intron SPoCk + chr3L 22766885 intron SPoCk + chr3L_17_22760001 chr3L_22760001 RAL-373_125b 2263 chr3L 22788667 22788710 chr3L 22788796 22788835 8 124 13.5 13.0 13.2 0.6 168 chr3L 22788667 exon CG14448 + chr3L 22788751 exon CG14448 + chr3L 22788835 exon CG14448 + chr3L_8_22785001 chr3L_22785001 RAL-373_125b 2264 chr3L 22788711 22788734 chr3L 22788785 22788863 8 116 10.5 11.5 11.0 0.7 152 chr3L 22788711 exon CG14448 + chr3L 22788787 exon CG14448 + chr3L 22788863 exon CG14448 + chr3L_8_22785001 chr3L_22785001 RAL-373_125b 2265 chr3L 22849409 22849433 chr3L 22849544 22849558 5 133 4.5 18.0 11.2 0.4 149 chr3L 22849409 intergenic not near genes chr3L 22849484 intergenic not near genes chr3L 22849558 intergenic not near genes chr3L_5_22845001 chr3L_22845001 RAL-373_125b 2266 chr3L 22865945 22866004 chr3L 22867123 22867187 Doc 16 1181 6.5 5.0 5.8 2.4 1242 chr3L 22865945 exon CG33170 + chr3L 22866566 intron CG33170 + chr3L 22867187 intron CG33170 + chr3L_16_22865001 chr3L_22865001 RAL-373_125b 2267 chr3L 22897183 22897226 chr3L 22897296 22897338 13 123 2.5 9.5 6.0 1.9 155 chr3L 22897183 intergenic not near genes chr3L 22897260 intergenic not near genes chr3L 22897338 intergenic not near genes chr3L_13_22895001 chr3L_22895001 RAL-373_125b 2268 chr3L 9102764 9102814 chr3L 22908066 22908066 6 13805276 42.0 25.0 33.5 0.2 13805302 chr3L 9102764 exon bol - chr3L 16005415 exon mRpS31 + chr3L 22908066 intergenic not near genes chr3L_6_16005001 chr3L_16005001 RAL-373_125b 2269 chr3L 19220633 19220637 chr3L 22908066 22908066 23 3687432 20.5 25.0 22.8 1.0 3687433 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_23_21060001 chr3L_21060001 RAL-373_125b 2270 chr3L 20525228 20525229 chr3L 22908066 22908066 12 2382837 19.0 25.0 22.0 0.5 2382838 chr3L 20525228 intron CG4825 - chr3L 21716647 intergenic not near genes chr3L 22908066 intergenic not near genes chr3L_12_21715001 chr3L_21715001 RAL-373_125b 2271 chr3L 9102758 9102814 chr3L 22908067 22908067 4 13805274 42.0 24.5 33.2 0.1 13805309 chr3L 9102758 exon bol - chr3L 16005412 exon mRpS31 + chr3L 22908067 intergenic not near genes chr3L_4_16005001 chr3L_16005001 RAL-373_125b 2272 chr3L 19220633 19220637 chr3L 22908067 22908067 13 3687432 20.5 24.5 22.5 0.6 3687434 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_13_21060001 chr3L_21060001 RAL-373_125b 2273 chr3L 22928785 22928860 chr3L 22928928 22929000 12 136 6.5 4.0 5.2 1.9 215 chr3L 22928785 intergenic not near genes chr3L 22928892 intergenic not near genes chr3L 22929000 intergenic not near genes chr3L_12_22925001 chr3L_22925001 RAL-373_125b 2274 chr3L 22989830 22989882 chr3L 22996854 22996906 297 20 7021 9.5 7.5 8.5 2.1 7076 chr3L 22989830 intergenic not near genes chr3L 22993368 intergenic not near genes chr3L 22996906 intergenic not near genes chr3L_20_22990001 chr3L_22990001 RAL-373_125b 2275 chr3L 23042184 23042247 chr3L 23048985 23049045 gypsy6 11 6800 13.5 13.5 13.5 0.8 6861 chr3L 23042184 intergenic not near genes chr3L 23045614 intergenic not near genes chr3L 23049045 intergenic not near genes chr3L_11_23045001 chr3L_23045001 RAL-373_125b 2276 chr3L 23101256 23101308 chr3L 23101507 23101569 4 258 18.5 8.5 13.5 0.3 313 chr3L 23101256 intron CkIIalpha + chr3L 23101412 intron CkIIalpha + chr3L 23101569 intron CkIIalpha + chr3L_4_23100001 chr3L_23100001 RAL-373_125b 2277 chr3L 23165886 23165898 chr3L 23173370 23173394 Quasimodo 4 7493 10.0 4.5 7.2 0.5 7508 chr3L 23165886 intergenic not near genes chr3L 23169640 intergenic not near genes chr3L 23173394 intergenic not near genes chr3L_4_23165001 chr3L_23165001 RAL-373_125b 2278 chr3L 23182224 23182274 chr3L 23182388 23182438 5 158 16.5 18.5 17.5 0.3 214 chr3L 23182224 intron CG34031 + chr3L 23182331 intron CG34031 + chr3L 23182438 intron CG34031 + chr3L_5_23180001 chr3L_23180001 RAL-373_125b 2279 chr3L 23205412 23205446 chr3L 23205687 23205718 6 275 22.0 12.5 17.2 0.3 306 chr3L 23205412 intergenic not near genes chr3L 23205565 intergenic not near genes chr3L 23205718 intergenic not near genes chr3L_6_23205001 chr3L_23205001 RAL-373_125b 2280 chr3L 23247594 23247639 chr3L 23248397 23248433 5 796 30.5 27.5 29.0 0.2 839 chr3L 23247594 intron nAChRalpha4 + chr3L 23248014 intron nAChRalpha4 + chr3L 23248433 intron nAChRalpha4 + chr3L_5_23245001 chr3L_23245001 RAL-373_125b 2281 chr3L 23436955 23436969 chr3L 23437138 23437155 5 189 16.0 15.0 15.5 0.3 200 chr3L 23436955 intergenic not near genes chr3L 23437055 intergenic not near genes chr3L 23437155 intergenic not near genes chr3L_5_23435001 chr3L_23435001 RAL-373_125b 2282 chr3L 23721289 23721351 chr3L 23721410 23721477 11 119 16.0 16.5 16.2 0.6 188 chr3L 23721289 intergenic not near genes chr3L 23721383 intergenic not near genes chr3L 23721477 intergenic not near genes chr3L_11_23720001 chr3L_23720001 RAL-373_125b 2283 chr3L 23750944 23751003 chr3L 23751115 23751159 7 159 43.0 36.5 39.8 0.2 215 chr3L 23750944 intergenic not near genes chr3L 23751052 intergenic not near genes chr3L 23751159 intergenic not near genes chr3L_7_23750001 chr3L_23750001 RAL-373_125b 2284 chr3L 23815304 23815324 chr3L 23815442 23815457 4 137 11.0 9.0 10.0 0.4 153 chr3L 23815304 intergenic not near genes chr3L 23815380 intergenic not near genes chr3L 23815457 intergenic not near genes chr3L_4_23815001 chr3L_23815001 RAL-373_125b 2285 chr3L 23848785 23848838 chr3L 23849668 23849712 R1A1-element 8 877 6.5 10.0 8.2 0.9 927 chr3L 23848785 intron CG40470 - chr3L 23849248 intron CG40470 - chr3L 23849712 intron CG40470 - chr3L_8_23845001 chr3L_23845001 RAL-373_125b 2286 chr3L 24012378 24012430 chr3L 24020764 24020806 roo 11 8386 3.5 5.0 4.2 2.1 8428 chr3L 24012378 intergenic not near genes chr3L 24016592 intergenic not near genes chr3L 24020806 intergenic not near genes chr3L_11_24015001 chr3L_24015001 RAL-373_125b 2287 chr3L 24168770 24168788 chr3L 24176129 24176174 ZAM 6 7373 4.5 5.5 5.0 1.0 7404 chr3L 24168770 intron Snap25 + chr3L 24172472 intron Snap25 + chr3L 24176174 intron Snap25 + chr3L_6_24170001 chr3L_24170001 RAL-373_125b 2288 chr3L 24168790 24168814 chr3L 24176126 24176171 ZAM 11 7357 3.0 4.5 3.8 2.3 7381 chr3L 24168790 intron Snap25 + chr3L 24172480 intron Snap25 + chr3L 24176171 intron Snap25 + chr3L_11_24170001 chr3L_24170001 RAL-373_125b 2289 chr3L 24791862 24791887 chr3L 24796691 24796716 Doc 8 4829 4.5 9.0 6.8 1.0 4854 chr3L 24791862 intergenic not near genes chr3L 24794289 intergenic not near genes chr3L 24796716 intergenic not near genes chr3L_8_24790001 chr3L_24790001 RAL-373_125b 2290 chr3L 25074298 25074328 chr3L 25074474 25074522 4 188 14.5 17.0 15.8 0.2 224 chr3L 25074298 intergenic not near genes chr3L 25074410 intergenic not near genes chr3L 25074522 intergenic not near genes chr3L_4_25070001 chr3L_25070001 RAL-373_125b 2291 chr3L 25343581 25343645 chr3L 25346398 25346462 8 2816 13.0 11.0 12.0 0.6 2881 chr3L 25343581 intergenic not near genes chr3L 25345022 intergenic not near genes chr3L 25346462 intergenic not near genes chr3L_8_25345001 chr3L_25345001 RAL-373_125b 2292 chr3L 25514678 25514713 chr3L 25514838 25514878 7 170 6.0 8.5 7.2 0.9 200 chr3L 25514678 intron CG41343 - chr3L 25514778 intron CG41343 - chr3L 25514878 intron CG41343 - chr3L_7_25510001 chr3L_25510001 RAL-373_125b 2293 chr3L 25995888 25995947 chr3L 25996018 25996078 6 123 13.0 17.0 15.0 0.4 190 chr3L 25995888 intron CG40178 - chr3L 25995983 intron CG40178 - chr3L 25996078 intron CG40178 - chr3L_6_25995001 chr3L_25995001 RAL-373_125b 2294 chr3L 26010787 26010848 chr3L 26010921 26010982 11 131 12.0 11.5 11.8 0.9 195 chr3L 26010787 intron CG40178 - chr3L 26010884 intron CG40178 - chr3L 26010982 intron CG40178 - chr3L_11_26010001 chr3L_26010001 RAL-373_125b 2295 chr3L 26694917 26694956 chr3L 26695022 26695066 10 122 10.5 10.5 10.5 0.9 149 chr3L 26694917 intergenic not near genes chr3L 26694992 intergenic not near genes chr3L 26695066 intergenic not near genes chr3L_10_26690001 chr3L_26690001 RAL-373_125b 2296 chr3L 27368849 27368903 chr3L 27369444 27369494 5 593 16.5 9.5 13.0 0.4 645 chr3L 27368849 intron Dbp80 + chr3L 27369172 intron Dbp80 + chr3L 27369494 intron Dbp80 + chr3L_5_27365001 chr3L_27365001 RAL-373_125b 2297 chr3L 27390670 27390710 chr3L 27390782 27390836 13 118 37.5 44.0 40.8 0.3 166 chr3L 27390670 intron Dbp80 + chr3L 27390753 intron Dbp80 + chr3L 27390836 intron Dbp80 + chr3L_13_27390001 chr3L_27390001 RAL-373_125b 2298 chr3L 27728790 27728801 chr3L 27728963 27728976 4 179 10.0 15.5 12.8 0.3 186 chr3L 27728790 intergenic not near genes chr3L 27728883 intergenic not near genes chr3L 27728976 intergenic not near genes chr3L_4_27725001 chr3L_27725001 RAL-373_125b 2299 chr3L 27980655 27980724 chr3L 27985503 27985555 Doc 5 4845 11.5 6.0 8.8 0.5 4900 chr3L 27980655 intron CG17514 - chr3L 27983105 intron CG17514 - chr3L 27985555 intron CG17514 - chr3L_5_27980001 chr3L_27980001 RAL-373_125b 2300 chr3R 1062380 1062403 chr3R 1062587 1062611 5 208 12.0 10.0 11.0 0.4 231 chr3R 1062380 intron CG15831 + chr3R 1062496 intron CG15831 + chr3R 1062611 intron CG15831 + chr3R_5_1060001 chr3R_1060001 RAL-373_125b 2301 chr3R 1521173 1521177 chr3R 1521304 1521315 4 133 19.5 15.0 17.2 0.2 142 chr3R 1521173 intergenic not near genes chr3R 1521244 intergenic not near genes chr3R 1521315 intergenic not near genes chr3R_4_1520001 chr3R_1520001 RAL-373_125b 2302 chr3R 1939036 1939069 chr3R 1939180 1939213 4 144 8.0 7.5 7.8 0.5 177 chr3R 1939036 intergenic not near genes chr3R 1939124 intergenic not near genes chr3R 1939213 intergenic not near genes chr3R_4_1935001 chr3R_1935001 RAL-373_125b 2303 chr3R 2556881 2556931 chr3R 2557564 2557622 5 686 17.5 22.5 20.0 0.2 741 chr3R 2556881 intron CG41056 - chr3R 2557252 intron CG41056 - chr3R 2557622 intron CG41056 - chr3R_5_2555001 chr3R_2555001 RAL-373_125b 2304 chr3R 3578330 3578376 chr3R 3578460 3578506 4 130 17.0 14.0 15.5 0.2 176 chr3R 3578330 intron Parp - chr3R 3578418 intron Parp - chr3R 3578506 intron Parp - chr3R_4_3575001 chr3R_3575001 RAL-373_125b 2305 chr3R 3752696 3752749 chr3R 3752829 3752882 11 130 11.5 12.0 11.8 0.9 186 chr3R 3752696 intergenic CG41128 + chr3R 3752789 intergenic CG41128 + chr3R 3752882 intergenic not near genes chr3R_11_3750001 chr3R_3750001 RAL-373_125b 2306 chr3R 4012462 4012514 chr3R 4012594 4012653 4 133 12.0 10.0 11.0 0.3 191 chr3R 4012462 intergenic not near genes chr3R 4012558 intergenic not near genes chr3R 4012653 intergenic not near genes chr3R_4_4010001 chr3R_4010001 RAL-373_125b 2307 chr3R 4063767 4063805 chr3R 4069097 4069109 6 5326 6.0 24.5 15.2 0.4 5342 chr3R 4063767 intergenic not near genes chr3R 4066438 intergenic not near genes chr3R 4069109 intergenic not near genes chr3R_6_4065001 chr3R_4065001 RAL-373_125b 2308 chr3R 4105001 4105060 chr3R 4110255 4110308 copia 5 5249 4.5 5.0 4.8 0.9 5307 chr3R 4105001 intergenic not near genes chr3R 4107654 intergenic not near genes chr3R 4110308 intergenic not near genes chr3R_5_4105001 chr3R_4105001 RAL-373_125b 2309 chr3R 4132857 4132925 chr3R 4133056 4133129 7 203 9.5 10.5 10.0 0.6 272 chr3R 4132857 intron Gfat1 + chr3R 4132993 intron Gfat1 + chr3R 4133129 intron Gfat1 + chr3R_7_4130001 chr3R_4130001 RAL-373_125b 2310 chr3R 4150537 4150556 chr3R 4150669 4150688 4 130 12.5 15.5 14.0 0.3 151 chr3R 4150537 intergenic not near genes chr3R 4150612 intergenic not near genes chr3R 4150688 intergenic not near genes chr3R_4_4150001 chr3R_4150001 RAL-373_125b 2311 chr3R 4206027 4206096 chr3R 4211652 4211721 mdg3 15 5622 4.5 3.5 4.0 3.0 5694 chr3R 4206027 intron CG14636 - chr3R 4208874 intron CG14636 - chr3R 4211721 intron CG14636 - chr3R_15_4205001 chr3R_4205001 RAL-373_125b 2312 chr3R 4230327 4230368 chr3R 4230456 4230499 8 126 18.5 17.0 17.8 0.4 172 chr3R 4230327 intergenic CG14641 - chr3R 4230413 intergenic CG14641 - chr3R 4230499 intergenic CG14641 - chr3R_8_4230001 chr3R_4230001 RAL-373_125b 2313 chr3R 4289970 4290033 chr3R 4290524 4290593 13 552 13.5 16.5 15.0 0.8 623 chr3R 4289970 intron cpx + chr3R 4290282 intron cpx + chr3R 4290593 intron cpx + chr3R_13_4290001 chr3R_4290001 RAL-373_125b 2314 chr3R 4366717 4366782 chr3R 4375150 4375215 roo 15 8432 5.5 7.0 6.2 2.1 8498 chr3R 4366717 3` UTR CG1090 + chr3R 4370966 intergenic not near genes chr3R 4375215 5` UTR CR44922 + chr3R_15_4370001 chr3R_4370001 RAL-373_125b 2315 chr3R 4376527 4376559 chr3R 4377015 4377057 4 495 9.0 11.0 10.0 0.4 530 chr3R 4376527 5` UTR CR44922 + chr3R 4376792 5` UTR CR44922 + chr3R 4377057 5` UTR CR44922 + chr3R_4_4375001 chr3R_4375001 RAL-373_125b 2316 chr3R 4408373 4408432 chr3R 4412727 4412783 Juan 16 4352 11.0 8.5 9.8 1.5 4410 chr3R 4408373 intron CG32944 - chr3R 4410578 intron CG32944 - chr3R 4412783 intron CG32944 - chr3R_16_4410001 chr3R_4410001 RAL-373_125b 2317 chr3R 4472089 4472136 chr3R 4472220 4472268 5 131 4.0 8.0 6.0 0.7 179 chr3R 4472089 intron CG31523 - chr3R 4472178 intron CG31523 - chr3R 4472268 intron CG31523 - chr3R_5_4470001 chr3R_4470001 RAL-373_125b 2318 chr3R 4568666 4568726 chr3R 4568803 4568838 9 130 17.0 19.0 18.0 0.5 172 chr3R 4568666 intergenic not near genes chr3R 4568752 intergenic not near genes chr3R 4568838 intergenic not near genes chr3R_9_4565001 chr3R_4565001 RAL-373_125b 2319 chr3R 4599260 4599317 chr3R 4599394 4599440 16 132 9.5 9.0 9.2 1.6 180 chr3R 4599260 intron CR44317 - chr3R 4599350 intron CR44317 - chr3R 4599440 intron CR44317 - chr3R_16_4595001 chr3R_4595001 RAL-373_125b 2320 chr3R 4609504 4609548 chr3R 4610710 4610754 1360 10 1208 14.5 12.0 13.2 0.7 1250 chr3R 4609504 intergenic not near genes chr3R 4610129 intergenic not near genes chr3R 4610754 intergenic not near genes chr3R_10_4610001 chr3R_4610001 RAL-373_125b 2321 chr3R 4683132 4683207 chr3R 4684941 4685014 S-element 8 1806 9.5 10.0 9.8 0.7 1882 chr3R 4683132 intron CG43427 + chr3R 4684073 intron CG43427 + chr3R 4685014 intron CG43427 + chr3R_8_4680001 chr3R_4680001 RAL-373_125b 2322 chr3R 4753211 4753255 chr3R 4757553 4757603 F-element 10 4346 9.0 5.0 7.0 1.2 4392 chr3R 4753211 intron,intron atms +,CG44098 - chr3R 4755407 intron,intron atms +,CG44098 - chr3R 4757603 intron,exon atms +,CG44098 - chr3R_10_4755001 chr3R_4755001 RAL-373_125b 2323 chr3R 4759702 4759732 chr3R 4761221 4761268 hopper2 4 1531 8.0 13.5 10.8 0.3 1566 chr3R 4759702 intron,intron atms +,CG44098 - chr3R 4760485 intron,intron atms +,CG44098 - chr3R 4761268 intron,intron atms +,CG44098 - chr3R_4_4760001 chr3R_4760001 RAL-373_125b 2324 chr3R 4796079 4796134 chr3R 4796252 4796307 11 171 24.5 18.0 21.2 0.5 228 chr3R 4796079 intron ctrip - chr3R 4796193 intron ctrip - chr3R 4796307 intron ctrip - chr3R_11_4795001 chr3R_4795001 RAL-373_125b 2325 chr3R 4861541 4861593 chr3R 4861665 4861719 10 125 17.0 14.5 15.8 0.6 178 chr3R 4861541 intron opa + chr3R 4861630 intron opa + chr3R 4861719 intron opa + chr3R_10_4860001 chr3R_4860001 RAL-373_125b 2326 chr3R 4887431 4887511 chr3R 4894858 4894933 rover 15 7410 3.0 4.0 3.5 3.3 7502 chr3R 4887431 intergenic not near genes chr3R 4891182 intergenic not near genes chr3R 4894933 intergenic not near genes chr3R_15_4890001 chr3R_4890001 RAL-373_125b 2327 chr3R 4922299 4922347 chr3R 4922428 4922474 8 126 10.0 10.0 10.0 0.7 175 chr3R 4922299 intron Cdep + chr3R 4922386 intron Cdep + chr3R 4922474 intron Cdep + chr3R_8_4920001 chr3R_4920001 RAL-373_125b 2328 chr3R 4943592 4943613 chr3R 4943737 4943752 10 148 17.5 12.0 14.8 0.6 160 chr3R 4943592 intron Cdep + chr3R 4943672 intron Cdep + chr3R 4943752 intron Cdep + chr3R_10_4940001 chr3R_4940001 RAL-373_125b 2329 chr3R 4948339 4948388 chr3R 4949011 4949050 14 671 26.0 23.5 24.8 0.5 711 chr3R 4948339 intergenic snRNA:U1:82Eb -,UbcD6 - chr3R 4948694 intergenic UbcD6 - chr3R 4949050 3` UTR UbcD6 - chr3R_14_4945001 chr3R_4945001 RAL-373_125b 2330 chr3R 4956828 4956898 chr3R 4956965 4957034 27 135 19.0 17.0 18.0 1.4 206 chr3R 4956828 intergenic CG2016 - chr3R 4956931 intergenic CG2016 - chr3R 4957034 3` UTR CG2016 - chr3R_27_4955001 chr3R_4955001 RAL-373_125b 2331 chr3R 4965968 4966027 chr3R 4966105 4966169 9 140 1.0 1.0 1.0 4.5 201 chr3R 4965968 intron CG1124 + chr3R 4966068 intron CG1124 + chr3R 4966169 intron CG1124 + chr3R_9_4965001 chr3R_4965001 RAL-373_125b 2332 chr3R 5045802 5045866 chr3R 5052949 5053013 HMS-Beagle 12 7151 5.5 4.0 4.8 2.1 7211 chr3R 5045802 3` UTR CR43635 - chr3R 5049408 intergenic not near genes chr3R 5053013 intergenic CR45588 - chr3R_12_5045001 chr3R_5045001 RAL-373_125b 2333 chr3R 5067945 5068012 chr3R 5073501 5073569 mdg3 15 5562 6.5 6.5 6.5 2.0 5624 chr3R 5067945 intergenic not near genes chr3R 5070757 intergenic not near genes chr3R 5073569 intergenic not near genes chr3R_15_5070001 chr3R_5070001 RAL-373_125b 2334 chr3R 5158105 5158150 chr3R 5158240 5158293 6 140 18.5 18.0 18.2 0.3 188 chr3R 5158105 intron dpr16 + chr3R 5158199 intron dpr16 + chr3R 5158293 intron dpr16 + chr3R_6_5155001 chr3R_5155001 RAL-373_125b 2335 chr3R 5161909 5161969 chr3R 5162035 5162099 14 134 3.0 5.0 4.0 2.8 190 chr3R 5161909 intron dpr16 + chr3R 5162004 intron dpr16 + chr3R 5162099 intron dpr16 + chr3R_14_5160001 chr3R_5160001 RAL-373_125b 2336 chr3R 5170236 5170299 chr3R 5170387 5170437 9 148 15.0 10.5 12.8 0.7 201 chr3R 5170236 intergenic dpr16 + chr3R 5170336 intergenic dpr16 + chr3R 5170437 intergenic dpr16 + chr3R_9_5170001 chr3R_5170001 RAL-373_125b 2337 chr3R 5278045 5278106 chr3R 5278176 5278231 12 127 4.0 7.5 5.8 1.8 186 chr3R 5278045 intron mtd - chr3R 5278138 intron mtd - chr3R 5278231 intron mtd - chr3R_12_5275001 chr3R_5275001 RAL-373_125b 2338 chr3R 5282960 5282963 chr3R 5283074 5283077 5 116 9.5 10.0 9.8 0.5 117 chr3R 5282960 intron mtd - chr3R 5283018 intron mtd - chr3R 5283077 intron mtd - chr3R_5_5280001 chr3R_5280001 RAL-373_125b 2339 chr3R 5282971 5282985 chr3R 5283072 5283114 6 112 6.5 10.0 8.2 0.7 143 chr3R 5282971 intron mtd - chr3R 5283042 intron mtd - chr3R 5283114 intron mtd - chr3R_6_5280001 chr3R_5280001 RAL-373_125b 2340 chr3R 5338367 5338414 chr3R 5343589 5343641 Rt1c 9 5225 8.5 14.0 11.2 0.7 5274 chr3R 5338367 intron mtd - chr3R 5341004 intron mtd - chr3R 5343641 intron mtd - chr3R_9_5340001 chr3R_5340001 RAL-373_125b 2341 chr3R 5385933 5385999 chr3R 5386154 5386211 5 214 16.5 21.0 18.8 0.3 278 chr3R 5385933 intron kkv - chr3R 5386072 intron kkv - chr3R 5386211 intron kkv - chr3R_5_5385001 chr3R_5385001 RAL-373_125b 2342 chr3R 5445922 5445987 chr3R 5452432 5452497 Burdock 21 6509 5.5 5.5 5.5 3.2 6575 chr3R 5445922 intron CG14669 + chr3R 5449210 intron CG14669 + chr3R 5452497 intron CG14669 + chr3R_21_5445001 chr3R_5445001 RAL-373_125b 2343 chr3R 5519549 5519615 chr3R 5519736 5519742 12 180 13.5 15.5 14.5 0.8 193 chr3R 5519549 intron,intron Nmdar1 -,Itp-r83A + chr3R 5519646 intron,intron Nmdar1 -,Itp-r83A + chr3R 5519742 intron,intron Nmdar1 -,Itp-r83A + chr3R_12_5515001 chr3R_5515001 RAL-373_125b 2344 chr3R 5726061 5726112 chr3R 5726273 5726323 5 211 12.5 13.5 13.0 0.4 262 chr3R 5726061 intergenic not near genes chr3R 5726192 intergenic not near genes chr3R 5726323 intergenic not near genes chr3R_5_5725001 chr3R_5725001 RAL-373_125b 2345 chr3R 5746003 5746017 chr3R 5746284 5746298 pogo 7 288 7.0 14.0 10.5 0.6 295 chr3R 5746003 3` UTR Madm + chr3R 5746150 3` UTR Madm + chr3R 5746298 3` UTR Madm + chr3R_7_5745001 chr3R_5745001 RAL-373_125b 2346 chr3R 5746025 5746044 chr3R 5746258 5746315 pogo 5 274 3.5 8.0 5.8 0.7 290 chr3R 5746025 3` UTR Madm + chr3R 5746170 3` UTR Madm + chr3R 5746315 3` UTR Madm + chr3R_5_5745001 chr3R_5745001 RAL-373_125b 2347 chr3R 5746974 5747035 chr3R 5753215 5753271 diver 12 6238 8.5 3.5 6.0 1.7 6297 chr3R 5746974 intergenic Madm + chr3R 5750122 intergenic not near genes chr3R 5753271 intergenic CG2091 - chr3R_12_5750001 chr3R_5750001 RAL-373_125b 2348 chr3R 5769185 5769257 chr3R 5769333 5769395 29 144 9.0 6.5 7.8 3.3 210 chr3R 5769185 intron CG2082 - chr3R 5769290 intron CG2082 - chr3R 5769395 intron CG2082 - chr3R_29_5765001 chr3R_5765001 RAL-373_125b 2349 chr3R 5772326 5772402 chr3R 5772534 5772610 28 207 8.5 6.0 7.2 3.4 284 chr3R 5772326 intron CG2082 - chr3R 5772468 intron CG2082 - chr3R 5772610 intron CG2082 - chr3R_28_5770001 chr3R_5770001 RAL-373_125b 2350 chr3R 5809078 5809128 chr3R 5809369 5809419 pogo 17 287 4.0 4.0 4.0 3.4 341 chr3R 5809078 3` UTR CG11000 + chr3R 5809248 3` UTR CG11000 + chr3R 5809419 3` UTR CG11000 + chr3R_17_5805001 chr3R_5805001 RAL-373_125b 2351 chr3R 5822349 5822403 chr3R 5823566 5823620 1360 19 1215 5.5 11.0 8.2 2.1 1271 chr3R 5822349 3` UTR CG2023 - chr3R 5822984 3` UTR CG2023 - chr3R 5823620 3` UTR CG2023 - chr3R_19_5820001 chr3R_5820001 RAL-373_125b 2352 chr3R 5836166 5836177 chr3R 5836310 5836331 6 149 16.5 16.0 16.2 0.3 165 chr3R 5836166 exon,3` UTR CG1208 +,CR45192 - chr3R 5836248 intron CG1208 + chr3R 5836331 intron CG1208 + chr3R_6_5835001 chr3R_5835001 RAL-373_125b 2353 chr3R 5840823 5840835 chr3R 5840956 5840957 4 133 17.5 22.5 20.0 0.2 134 chr3R 5840823 intergenic CG1213 + chr3R 5840890 intergenic CG1213 + chr3R 5840957 intergenic CG1213 + chr3R_4_5840001 chr3R_5840001 RAL-373_125b 2354 chr3R 5846852 5846875 chr3R 5846978 5847001 7 126 11.5 6.0 8.8 0.7 149 chr3R 5846852 intergenic CG1213 +,CG14676 + chr3R 5846926 intergenic CG14676 +,CG1213 + chr3R 5847001 intergenic CG14676 +,CG1213 + chr3R_7_5845001 chr3R_5845001 RAL-373_125b 2355 chr3R 5927539 5927576 chr3R 5927813 5927866 pogo 12 276 7.0 13.0 10.0 1.1 327 chr3R 5927539 intron CG34113 - chr3R 5927702 intron CG34113 - chr3R 5927866 intron CG34113 - chr3R_12_5925001 chr3R_5925001 RAL-373_125b 2356 chr3R 5980738 5980767 chr3R 5980879 5980888 9 137 15.0 14.5 14.8 0.6 150 chr3R 5980738 intergenic not near genes chr3R 5980813 intergenic not near genes chr3R 5980888 intergenic not near genes chr3R_9_5980001 chr3R_5980001 RAL-373_125b 2357 chr3R 6015936 6015949 chr3R 6024461 6024480 Tirant 4 8528 12.0 9.5 10.8 0.3 8544 chr3R 6015936 intergenic not near genes chr3R 6020208 intergenic not near genes chr3R 6024480 intergenic not near genes chr3R_4_6020001 chr3R_6020001 RAL-373_125b 2358 chr3R 6015954 6015992 chr3R 6024459 6024507 Tirant 12 8520 7.0 9.5 8.2 1.3 8553 chr3R 6015954 intergenic not near genes chr3R 6020230 intergenic not near genes chr3R 6024507 intergenic not near genes chr3R_12_6020001 chr3R_6020001 RAL-373_125b 2359 chr3R 6048408 6048460 chr3R 6048532 6048590 10 126 19.5 16.5 18.0 0.5 182 chr3R 6048408 intergenic not near genes chr3R 6048499 intergenic not near genes chr3R 6048590 intergenic not near genes chr3R_10_6045001 chr3R_6045001 RAL-373_125b 2360 chr3R 6119117 6119146 chr3R 6119252 6119280 4 135 7.0 16.0 11.5 0.3 163 chr3R 6119117 intergenic not near genes chr3R 6119198 intergenic not near genes chr3R 6119280 intergenic not near genes chr3R_4_6115001 chr3R_6115001 RAL-373_125b 2361 chr3R 6124186 6124251 chr3R 6124320 6124380 10 132 18.5 13.5 16.0 0.6 194 chr3R 6124186 3` UTR Vha14-2 + chr3R 6124283 3` UTR Vha14-2 + chr3R 6124380 3` UTR Vha14-2 + chr3R_10_6120001 chr3R_6120001 RAL-373_125b 2362 chr3R 6148429 6148488 chr3R 6148577 6148636 8 145 13.5 11.5 12.5 0.6 207 chr3R 6148429 intergenic not near genes chr3R 6148532 intergenic not near genes chr3R 6148636 intergenic not near genes chr3R_8_6145001 chr3R_6145001 RAL-373_125b 2363 chr3R 6158040 6158094 chr3R 6158304 6158358 8 262 10.0 14.0 12.0 0.6 318 chr3R 6158040 intergenic not near genes chr3R 6158199 intergenic not near genes chr3R 6158358 intergenic not near genes chr3R_8_6155001 chr3R_6155001 RAL-373_125b 2364 chr3R 6158496 6158538 chr3R 6167090 6167117 Tirant 9 8613 6.5 4.0 5.2 1.5 8621 chr3R 6158496 intergenic not near genes chr3R 6162806 intergenic not near genes chr3R 6167117 intergenic CG1077 + chr3R_9_6160001 chr3R_6160001 RAL-373_125b 2365 chr3R 6175129 6175185 chr3R 6182451 6182507 HMS-Beagle2 13 7321 7.0 5.5 6.2 1.8 7378 chr3R 6175129 intergenic Osi1 + chr3R 6178818 intron CR45194 + chr3R 6182507 intergenic CR45194 + chr3R_13_6175001 chr3R_6175001 RAL-373_125b 2366 chr3R 6186491 6186544 chr3R 6186608 6186676 11 125 16.5 15.5 16.0 0.6 185 chr3R 6186491 intergenic not near genes chr3R 6186584 intergenic not near genes chr3R 6186676 intergenic not near genes chr3R_11_6185001 chr3R_6185001 RAL-373_125b 2367 chr3R 6191130 6191192 chr3R 6191254 6191322 12 126 12.5 12.0 12.2 0.9 192 chr3R 6191130 intron NPFR + chr3R 6191226 intron NPFR + chr3R 6191322 intron NPFR + chr3R_12_6190001 chr3R_6190001 RAL-373_125b 2368 chr3R 6192938 6192980 chr3R 6193129 6193171 7 187 12.0 14.5 13.2 0.5 233 chr3R 6192938 intron NPFR + chr3R 6193054 intron NPFR + chr3R 6193171 intron NPFR + chr3R_7_6190001 chr3R_6190001 RAL-373_125b 2369 chr3R 6206253 6206306 chr3R 6206514 6206548 BS 18 256 14.5 7.5 11.0 1.5 295 chr3R 6206253 exon Osi24 + chr3R 6206400 intron Osi24 + chr3R 6206548 intron Osi24 + chr3R_18_6205001 chr3R_6205001 RAL-373_125b 2370 chr3R 6216980 6217029 chr3R 6217256 6217314 11 286 9.0 15.0 12.0 0.8 334 chr3R 6216980 intron Osi3 + chr3R 6217147 intron Osi3 + chr3R 6217314 intron Osi3 + chr3R_11_6215001 chr3R_6215001 RAL-373_125b 2371 chr3R 6433706 6433751 chr3R 6433825 6433869 5 119 19.0 18.0 18.5 0.3 163 chr3R 6433706 intron gpp + chr3R 6433788 intron gpp + chr3R 6433869 intron gpp + chr3R_5_6430001 chr3R_6430001 RAL-373_125b 2372 chr3R 6461566 6461591 chr3R 6461696 6461715 4 128 19.5 18.5 19.0 0.2 149 chr3R 6461566 intergenic not near genes chr3R 6461640 intergenic not near genes chr3R 6461715 intergenic not near genes chr3R_4_6460001 chr3R_6460001 RAL-373_125b 2373 chr3R 6482073 6482123 chr3R 6482203 6482259 10 134 11.0 7.0 9.0 1.0 186 chr3R 6482073 intron CG15186 + chr3R 6482166 intron CG15186 + chr3R 6482259 intron CG15186 + chr3R_10_6480001 chr3R_6480001 RAL-373_125b 2374 chr3R 6487445 6487518 chr3R 6487572 6487640 12 125 11.0 12.0 11.5 1.0 195 chr3R 6487445 intron CG15186 + chr3R 6487542 intron CG15186 + chr3R 6487640 intron CG15186 + chr3R_12_6485001 chr3R_6485001 RAL-373_125b 2375 chr3R 6500044 6500093 chr3R 6500452 6500502 8 411 13.0 14.5 13.8 0.5 458 chr3R 6500044 intergenic not near genes chr3R 6500273 intergenic not near genes chr3R 6500502 intergenic not near genes chr3R_8_6500001 chr3R_6500001 RAL-373_125b 2376 chr3R 6509993 6510040 chr3R 6515117 6515171 jockey 13 5129 8.0 5.5 6.8 1.7 5178 chr3R 6509993 intergenic not near genes chr3R 6512582 intergenic not near genes chr3R 6515171 intergenic not near genes chr3R_13_6510001 chr3R_6510001 RAL-373_125b 2377 chr3R 6517105 6517138 chr3R 6517321 6517364 7 223 16.0 16.5 16.2 0.4 259 chr3R 6517105 intergenic not near genes chr3R 6517234 intergenic not near genes chr3R 6517364 intergenic not near genes chr3R_7_6515001 chr3R_6515001 RAL-373_125b 2378 chr3R 6519075 6519132 chr3R 6519232 6519293 8 159 19.0 16.0 17.5 0.4 218 chr3R 6519075 intergenic not near genes chr3R 6519184 intergenic not near genes chr3R 6519293 intergenic not near genes chr3R_8_6515001 chr3R_6515001 RAL-373_125b 2379 chr3R 6526313 6526374 chr3R 6526545 6526616 8 238 6.5 8.5 7.5 0.9 303 chr3R 6526313 intergenic not near genes chr3R 6526464 intergenic not near genes chr3R 6526616 intergenic not near genes chr3R_8_6525001 chr3R_6525001 RAL-373_125b 2380 chr3R 6538170 6538221 chr3R 6538310 6538363 5 138 16.0 16.5 16.2 0.3 193 chr3R 6538170 intron dpr11 - chr3R 6538266 intron dpr11 - chr3R 6538363 exon dpr11 - chr3R_5_6535001 chr3R_6535001 RAL-373_125b 2381 chr3R 6550311 6550344 chr3R 6550436 6550475 7 129 15.0 23.5 19.2 0.3 164 chr3R 6550311 intron dpr11 - chr3R 6550393 intron dpr11 - chr3R 6550475 intron dpr11 - chr3R_7_6550001 chr3R_6550001 RAL-373_125b 2382 chr3R 6551075 6551126 chr3R 6551219 6551270 7 142 18.0 16.5 17.2 0.4 195 chr3R 6551075 intron dpr11 - chr3R 6551172 intron dpr11 - chr3R 6551270 intron dpr11 - chr3R_7_6550001 chr3R_6550001 RAL-373_125b 2383 chr3R 6560716 6560751 chr3R 6560891 6560933 4 177 16.5 15.0 15.8 0.2 217 chr3R 6560716 intron dpr11 - chr3R 6560824 intron dpr11 - chr3R 6560933 intron dpr11 - chr3R_4_6560001 chr3R_6560001 RAL-373_125b 2384 chr3R 6560752 6560777 chr3R 6560889 6560915 4 160 15.5 15.0 15.2 0.2 163 chr3R 6560752 intron dpr11 - chr3R 6560834 intron dpr11 - chr3R 6560915 intron dpr11 - chr3R_4_6560001 chr3R_6560001 RAL-373_125b 2385 chr3R 6561908 6561957 chr3R 6562042 6562091 7 132 11.5 14.0 12.8 0.5 183 chr3R 6561908 intron dpr11 - chr3R 6562000 intron dpr11 - chr3R 6562091 intron dpr11 - chr3R_7_6560001 chr3R_6560001 RAL-373_125b 2386 chr3R 6624214 6624276 chr3R 6624346 6624406 7 131 16.0 17.0 16.5 0.4 192 chr3R 6624214 intergenic not near genes chr3R 6624310 intergenic not near genes chr3R 6624406 intergenic not near genes chr3R_7_6620001 chr3R_6620001 RAL-373_125b 2387 chr3R 6639864 6639933 chr3R 6639992 6640047 8 126 11.5 9.0 10.2 0.7 183 chr3R 6639864 intergenic not near genes chr3R 6639956 intergenic not near genes chr3R 6640047 intergenic not near genes chr3R_8_6635001 chr3R_6635001 RAL-373_125b 2388 chr3R 6687992 6688044 chr3R 6688204 6688256 7 212 10.5 11.5 11.0 0.6 264 chr3R 6687992 3` UTR Ccp84Ag + chr3R 6688124 intergenic Ccp84Ag + chr3R 6688256 intergenic Ccp84Ag + chr3R_7_6685001 chr3R_6685001 RAL-373_125b 2389 chr3R 6697965 6698004 chr3R 6698094 6698127 5 128 14.0 14.5 14.2 0.3 162 chr3R 6697965 intergenic not near genes chr3R 6698046 intergenic not near genes chr3R 6698127 intergenic not near genes chr3R_5_6695001 chr3R_6695001 RAL-373_125b 2390 chr3R 6737459 6737521 chr3R 6739286 6739333 Doc 9 1820 5.0 11.0 8.0 1.0 1874 chr3R 6737459 intron pb - chr3R 6738396 intron pb - chr3R 6739333 intron pb - chr3R_9_6735001 chr3R_6735001 RAL-373_125b 2391 chr3R 6743114 6743158 chr3R 6743247 6743291 5 133 15.0 18.0 16.5 0.3 177 chr3R 6743114 intergenic zen2 - chr3R 6743202 3` UTR zen2 - chr3R 6743291 exon zen2 - chr3R_5_6740001 chr3R_6740001 RAL-373_125b 2392 chr3R 6773541 6773574 chr3R 6773649 6773652 6 120 16.5 15.0 15.8 0.4 111 chr3R 6773541 intron CR42721 + chr3R 6773596 intron CR42721 + chr3R 6773652 intron CR42721 + chr3R_6_6770001 chr3R_6770001 RAL-373_125b 2393 chr3R 6776971 6777041 chr3R 6777112 6777161 19 137 19.5 18.0 18.8 1.0 190 chr3R 6776971 intron CR42721 + chr3R 6777066 intron CR42721 + chr3R 6777161 intron CR42721 + chr3R_19_6775001 chr3R_6775001 RAL-373_125b 2394 chr3R 6780435 6780479 chr3R 6780558 6780604 8 127 10.5 9.0 9.8 0.7 169 chr3R 6780435 intergenic not near genes chr3R 6780520 intergenic not near genes chr3R 6780604 intergenic not near genes chr3R_8_6780001 chr3R_6780001 RAL-373_125b 2395 chr3R 6782407 6782458 chr3R 6782521 6782587 5 122 18.5 16.0 17.2 0.3 180 chr3R 6782407 intergenic not near genes chr3R 6782497 intergenic not near genes chr3R 6782587 intergenic not near genes chr3R_5_6780001 chr3R_6780001 RAL-373_125b 2396 chr3R 6796149 6796201 chr3R 6796302 6796359 14 157 4.5 4.5 4.5 2.5 210 chr3R 6796149 intron Dfd + chr3R 6796254 intron Dfd + chr3R 6796359 intron Dfd + chr3R_14_6795001 chr3R_6795001 RAL-373_125b 2397 chr3R 6807217 6807284 chr3R 6807349 6807410 10 131 4.5 6.0 5.2 1.6 193 chr3R 6807217 intergenic not near genes chr3R 6807314 intergenic not near genes chr3R 6807410 intergenic not near genes chr3R_10_6805001 chr3R_6805001 RAL-373_125b 2398 chr3R 6813445 6813501 chr3R 6813765 6813831 12 329 13.0 14.0 13.5 0.8 386 chr3R 6813445 intron CR42651 - chr3R 6813638 intron CR42651 - chr3R 6813831 intron CR42651 - chr3R_12_6810001 chr3R_6810001 RAL-373_125b 2399 chr3R 6827984 6828037 chr3R 6828110 6828163 18 124 2.5 5.0 3.8 3.8 179 chr3R 6827984 intron Scr - chr3R 6828074 intron Scr - chr3R 6828163 intron Scr - chr3R_18_6825001 chr3R_6825001 RAL-373_125b 2400 chr3R 6856345 6856400 chr3R 6856512 6856567 10 167 10.0 19.0 14.5 0.6 222 chr3R 6856345 intergenic not near genes chr3R 6856456 intergenic not near genes chr3R 6856567 intergenic not near genes chr3R_10_6855001 chr3R_6855001 RAL-373_125b 2401 chr3R 6862173 6862248 chr3R 6862310 6862373 18 134 6.5 3.5 5.0 3.0 200 chr3R 6862173 intergenic not near genes chr3R 6862273 intergenic not near genes chr3R 6862373 intergenic not near genes chr3R_18_6860001 chr3R_6860001 RAL-373_125b 2402 chr3R 6891248 6891313 chr3R 6891344 6891551 4 146 3.0 4.5 3.8 0.8 303 chr3R 6891248 intergenic not near genes chr3R 6891400 intergenic not near genes chr3R 6891551 intergenic not near genes chr3R_4_6890001 chr3R_6890001 RAL-373_125b 2403 chr3R 6912065 6912129 chr3R 6912221 6912287 5 158 14.0 11.5 12.8 0.4 222 chr3R 6912065 intron Antp - chr3R 6912176 intron Antp - chr3R 6912287 intron Antp - chr3R_5_6910001 chr3R_6910001 RAL-373_125b 2404 chr3R 6914837 6914876 chr3R 6914941 6915008 5 115 16.5 16.5 16.5 0.3 171 chr3R 6914837 intron Antp - chr3R 6914922 intron Antp - chr3R 6915008 intron Antp - chr3R_5_6910001 chr3R_6910001 RAL-373_125b 2405 chr3R 6923559 6923583 chr3R 6923696 6923719 5 136 16.0 14.5 15.2 0.3 160 chr3R 6923559 intron Antp - chr3R 6923639 intron Antp - chr3R 6923719 intron Antp - chr3R_5_6920001 chr3R_6920001 RAL-373_125b 2406 chr3R 6958896 6958945 chr3R 6959136 6959203 10 253 9.0 12.5 10.8 0.8 307 chr3R 6958896 intron Antp - chr3R 6959050 intron Antp - chr3R 6959203 intron Antp - chr3R_10_6955001 chr3R_6955001 RAL-373_125b 2407 chr3R 6987381 6987423 chr3R 6987507 6987551 5 130 13.0 10.5 11.8 0.4 170 chr3R 6987381 intron Antp - chr3R 6987466 intron Antp - chr3R 6987551 intron Antp - chr3R_5_6985001 chr3R_6985001 RAL-373_125b 2408 chr3R 7002612 7002670 chr3R 7002738 7002786 4 122 9.0 10.5 9.8 0.4 174 chr3R 7002612 intergenic not near genes chr3R 7002699 intergenic not near genes chr3R 7002786 intergenic not near genes chr3R_4_7000001 chr3R_7000001 RAL-373_125b 2409 chr3R 7036763 7036779 chr3R 7036900 7036914 4 136 14.0 16.0 15.0 0.2 151 chr3R 7036763 intergenic not near genes chr3R 7036838 intergenic not near genes chr3R 7036914 intergenic not near genes chr3R_4_7035001 chr3R_7035001 RAL-373_125b 2410 chr3R 7103235 7103296 chr3R 7103361 7103385 9 111 7.5 8.5 8.0 1.0 150 chr3R 7103235 intron Alh - chr3R 7103310 intron Alh - chr3R 7103385 intron Alh - chr3R_9_7100001 chr3R_7100001 RAL-373_125b 2411 chr3R 7126469 7126523 chr3R 7126614 7126668 12 143 4.0 6.0 5.0 2.0 199 chr3R 7126469 3` UTR,3` UTR CG10098 +,CG10068 - chr3R 7126568 3` UTR CG10068 - chr3R 7126668 3` UTR CG10068 - chr3R_12_7125001 chr3R_7125001 RAL-373_125b 2412 chr3R 7206839 7206896 chr3R 7206967 7207025 11 126 9.0 13.5 11.2 0.9 186 chr3R 7206839 intergenic not near genes chr3R 7206932 intergenic CG1288 - chr3R 7207025 intergenic CG1288 - chr3R_11_7205001 chr3R_7205001 RAL-373_125b 2413 chr3R 7210556 7210606 chr3R 7210683 7210742 4 129 7.5 10.5 9.0 0.4 186 chr3R 7210556 intergenic not near genes chr3R 7210649 intergenic not near genes chr3R 7210742 intergenic not near genes chr3R_4_7210001 chr3R_7210001 RAL-373_125b 2414 chr3R 7447947 7448009 chr3R 7448075 7448137 12 128 6.0 9.5 7.8 1.4 190 chr3R 7447947 intergenic not near genes chr3R 7448042 intergenic not near genes chr3R 7448137 intergenic not near genes chr3R_12_7445001 chr3R_7445001 RAL-373_125b 2415 chr3R 7464647 7464707 chr3R 7464783 7464843 6 136 18.0 16.0 17.0 0.3 196 chr3R 7464647 intergenic not near genes chr3R 7464745 intergenic not near genes chr3R 7464843 intergenic not near genes chr3R_6_7460001 chr3R_7460001 RAL-373_125b 2416 chr3R 7492562 7492608 chr3R 7492689 7492735 6 126 12.0 11.0 11.5 0.5 173 chr3R 7492562 intron alpha-Est10 - chr3R 7492648 intron alpha-Est10 - chr3R 7492735 intron alpha-Est10 - chr3R_6_7490001 chr3R_7490001 RAL-373_125b 2417 chr3R 7497866 7497912 chr3R 7498009 7498053 10 143 14.0 11.5 12.8 0.7 187 chr3R 7497866 intron alpha-Est9 - chr3R 7497960 intron alpha-Est9 - chr3R 7498053 intron alpha-Est9 - chr3R_10_7495001 chr3R_7495001 RAL-373_125b 2418 chr3R 7548563 7548623 chr3R 7548692 7548752 9 128 15.0 18.0 16.5 0.5 189 chr3R 7548563 intron alpha-Est1 - chr3R 7548658 intron alpha-Est1 - chr3R 7548752 intron alpha-Est1 - chr3R_9_7545001 chr3R_7545001 RAL-373_125b 2419 chr3R 7552928 7552988 chr3R 7553058 7553126 15 136 9.5 9.5 9.5 1.4 198 chr3R 7552928 intergenic not near genes chr3R 7553027 intergenic not near genes chr3R 7553126 intergenic not near genes chr3R_15_7550001 chr3R_7550001 RAL-373_125b 2420 chr3R 7621486 7621564 chr3R 7621626 7621682 11 133 4.0 7.5 5.8 1.6 196 chr3R 7621486 intron CG34127 - chr3R 7621584 intron CG34127 - chr3R 7621682 intron CG34127 - chr3R_11_7620001 chr3R_7620001 RAL-373_125b 2421 chr3R 7642556 7642621 chr3R 7642974 7643039 9 415 12.5 17.5 15.0 0.6 483 chr3R 7642556 intergenic not near genes chr3R 7642798 intergenic not near genes chr3R 7643039 intergenic not near genes chr3R_9_7640001 chr3R_7640001 RAL-373_125b 2422 chr3R 7656987 7657033 chr3R 7657351 7657397 12 361 8.0 10.5 9.2 1.2 410 chr3R 7656987 intergenic not near genes chr3R 7657192 intergenic not near genes chr3R 7657397 intergenic not near genes chr3R_12_7655001 chr3R_7655001 RAL-373_125b 2423 chr3R 7677873 7677939 chr3R 7678036 7678082 16 156 3.5 4.5 4.0 3.2 209 chr3R 7677873 intron Nlg1 + chr3R 7677978 intron Nlg1 + chr3R 7678082 intron Nlg1 + chr3R_16_7675001 chr3R_7675001 RAL-373_125b 2424 chr3R 7684906 7684964 chr3R 7685268 7685326 15 361 20.5 19.0 19.8 0.7 420 chr3R 7684906 intron Nlg1 + chr3R 7685116 intron Nlg1 + chr3R 7685326 intron Nlg1 + chr3R_15_7685001 chr3R_7685001 RAL-373_125b 2425 chr3R 7694533 7694602 chr3R 7713644 7713713 invader3 15 19109 5.0 7.5 6.2 2.1 19180 chr3R 7694533 3` UTR Nlg1 + chr3R 7704123 intergenic not near genes chr3R 7713713 intergenic not near genes chr3R_15_7700001 chr3R_7700001 RAL-373_125b 2426 chr3R 7724428 7724461 chr3R 7724548 7724576 7 129 13.0 15.0 14.0 0.5 148 chr3R 7724428 3` UTR CG2616 + chr3R 7724502 3` UTR CG2616 + chr3R 7724576 3` UTR CG2616 + chr3R_7_7720001 chr3R_7720001 RAL-373_125b 2427 chr3R 7729431 7729492 chr3R 7737409 7737480 Stalker2 24 7985 8.0 7.0 7.5 2.8 8049 chr3R 7729431 intergenic not near genes chr3R 7733456 intergenic not near genes chr3R 7737480 intergenic not near genes chr3R_24_7730001 chr3R_7730001 RAL-373_125b 2428 chr3R 7760220 7760281 chr3R 7760777 7760840 18 555 26.0 17.0 21.5 0.8 620 chr3R 7760220 intron Sp7 + chr3R 7760530 intron Sp7 + chr3R 7760840 5` UTR Sp7 + chr3R_18_7760001 chr3R_7760001 RAL-373_125b 2429 chr3R 7773344 7773344 chr3R 7890529 7890532 4 117186 17.0 19.0 18.0 0.2 117188 chr3R 7773344 intergenic not near genes chr3R 7831938 intron CG34384 + chr3R 7890532 intron mRpS9 - chr3R_4_7830001 chr3R_7830001 RAL-373_125b 2430 chr3R 7821678 7821715 chr3R 7821824 7821861 5 145 11.5 13.5 12.5 0.4 183 chr3R 7821678 intron CG34384 + chr3R 7821770 intron CG34384 + chr3R 7821861 intron CG34384 + chr3R_5_7820001 chr3R_7820001 RAL-373_125b 2431 chr3R 7849601 7849670 chr3R 7850813 7850876 1360 16 1210 4.5 2.0 3.2 3.8 1275 chr3R 7849601 intron CG34384 + chr3R 7850238 intron CG34384 + chr3R 7850876 intron CG34384 + chr3R_16_7850001 chr3R_7850001 RAL-373_125b 2432 chr3R 7857621 7857664 chr3R 7857754 7857797 5 130 7.5 10.0 8.8 0.5 176 chr3R 7857621 3` UTR CG17816 - chr3R 7857709 3` UTR CG17816 - chr3R 7857797 3` UTR CG17816 - chr3R_5_7855001 chr3R_7855001 RAL-373_125b 2433 chr3R 7773344 7773344 chr3R 7890529 7890534 4 117188 17.0 19.0 18.0 0.2 117190 chr3R 7773344 intergenic not near genes chr3R 7831939 intron CG34384 + chr3R 7890534 intron mRpS9 - chr3R_4_7830001 chr3R_7830001 RAL-373_125b 2434 chr3R 7973274 7973329 chr3R 7974386 7974441 1360 13 1112 3.5 6.5 5.0 2.2 1167 chr3R 7973274 intergenic not near genes chr3R 7973858 intergenic not near genes chr3R 7974441 3` UTR CD98hc - chr3R_13_7970001 chr3R_7970001 RAL-373_125b 2435 chr3R 8038291 8038302 chr3R 8038419 8038435 6 129 7.5 12.0 9.8 0.6 144 chr3R 8038291 5` UTR CR44936 + chr3R 8038363 5` UTR CR44936 + chr3R 8038435 5` UTR CR44936 + chr3R_6_8035001 chr3R_8035001 RAL-373_125b 2436 chr3R 8082536 8082593 chr3R 8082663 8082719 11 126 11.0 16.0 13.5 0.8 183 chr3R 8082536 intron mAChR-B + chr3R 8082628 intron mAChR-B + chr3R 8082719 exon mAChR-B + chr3R_11_8080001 chr3R_8080001 RAL-373_125b 2437 chr3R 8090231 8090281 chr3R 8090458 8090508 8 226 18.5 13.5 16.0 0.5 277 chr3R 8090231 5` UTR CR44330 + chr3R 8090370 intergenic CR44330 + chr3R 8090508 intergenic CR44330 + chr3R_8_8090001 chr3R_8090001 RAL-373_125b 2438 chr3R 8090520 8090564 chr3R 8094047 8094091 297 4 3523 8.5 11.0 9.8 0.4 3571 chr3R 8090520 intergenic CR44330 + chr3R 8092306 intergenic not near genes chr3R 8094091 intergenic CG7900 + chr3R_4_8090001 chr3R_8090001 RAL-373_125b 2439 chr3R 8094367 8094426 chr3R 8099722 8099781 Transpac 14 5354 6.0 4.5 5.2 2.3 5414 chr3R 8094367 intron CG7900 + chr3R 8097074 intron CG7900 + chr3R 8099781 intron CG7900 + chr3R_14_8095001 chr3R_8095001 RAL-373_125b 2440 chr3R 8101716 8101776 chr3R 8104850 8104910 G2 12 3126 4.5 6.0 5.2 1.9 3194 chr3R 8101716 exon CG7900 + chr3R 8103313 intron CG7900 + chr3R 8104910 3` UTR CG7900 + chr3R_12_8100001 chr3R_8100001 RAL-373_125b 2441 chr3R 8107363 8107411 chr3R 8107522 8107595 19 180 3.5 6.0 4.8 3.3 232 chr3R 8107363 intron puc + chr3R 8107479 intron puc + chr3R 8107595 intron puc + chr3R_19_8105001 chr3R_8105001 RAL-373_125b 2442 chr3R 8207518 8207579 chr3R 8208403 8208474 F-element 17 885 4.0 6.0 5.0 2.8 956 chr3R 8207518 intergenic not near genes chr3R 8207996 intergenic not near genes chr3R 8208474 intergenic not near genes chr3R_17_8205001 chr3R_8205001 RAL-373_125b 2443 chr3R 8212987 8213041 chr3R 8213103 8213162 8 126 5.0 2.5 3.8 1.7 175 chr3R 8212987 intergenic not near genes chr3R 8213074 intergenic not near genes chr3R 8213162 intergenic not near genes chr3R_8_8210001 chr3R_8210001 RAL-373_125b 2444 chr3R 8267809 8267854 chr3R 8267940 8267985 7 127 20.0 17.0 18.5 0.4 176 chr3R 8267809 exon Mcm2 + chr3R 8267897 3` UTR Mcm2 + chr3R 8267985 3` UTR CG9630 - chr3R_7_8265001 chr3R_8265001 RAL-373_125b 2445 chr3R 8339246 8339247 chr3R 21907534 21907536 6 13568288 25.5 23.5 24.5 0.2 13568290 chr3R 8339246 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_6_15120001 chr3R_15120001 RAL-373_125b 2446 chr3R 8375114 8375154 chr3R 8375222 8375288 6 127 14.5 13.0 13.8 0.4 174 chr3R 8375114 intron CG45263 - chr3R 8375201 intron CG45263 - chr3R 8375288 intron CG45263 - chr3R_6_8375001 chr3R_8375001 RAL-373_125b 2447 chr3R 8393593 8393605 chr3R 8393667 8393733 5 121 15.5 13.5 14.5 0.3 140 chr3R 8393593 intron CG45263 - chr3R 8393663 intron CG45263 - chr3R 8393733 intron CG45263 - chr3R_5_8390001 chr3R_8390001 RAL-373_125b 2448 chr3R 8401953 8402015 chr3R 8402135 8402197 9 179 12.0 13.5 12.8 0.7 244 chr3R 8401953 intron CG45263 - chr3R 8402075 intron CG45263 - chr3R 8402197 intron CG45263 - chr3R_9_8400001 chr3R_8400001 RAL-373_125b 2449 chr3R 8402975 8403028 chr3R 8412183 8412244 roo 16 9208 6.5 5.0 5.8 2.4 9269 chr3R 8402975 intron CG45263 - chr3R 8407610 intron CG45263 - chr3R 8412244 intron CG45263 - chr3R_16_8405001 chr3R_8405001 RAL-373_125b 2450 chr3R 8478039 8478102 chr3R 8478163 8478232 18 124 4.0 4.5 4.2 3.5 193 chr3R 8478039 intergenic CG45263 - chr3R 8478136 intergenic not near genes chr3R 8478232 intergenic not near genes chr3R_18_8475001 chr3R_8475001 RAL-373_125b 2451 chr3R 8552342 8552392 chr3R 8552447 8552520 12 118 18.0 18.5 18.2 0.6 178 chr3R 8552342 intergenic Or85d + chr3R 8552431 intergenic Or85d + chr3R 8552520 intergenic Or85d + chr3R_12_8550001 chr3R_8550001 RAL-373_125b 2452 chr3R 8563523 8563588 chr3R 8563678 8563749 18 155 16.0 15.0 15.5 1.1 226 chr3R 8563523 3` UTR CR44291 - chr3R 8563636 3` UTR CR44291 - chr3R 8563749 3` UTR CR44291 - chr3R_18_8560001 chr3R_8560001 RAL-373_125b 2453 chr3R 8570460 8570498 chr3R 8575121 8575147 HMS-Beagle 8 4668 3.0 5.0 4.0 1.6 4687 chr3R 8570460 intergenic not near genes chr3R 8572804 intergenic not near genes chr3R 8575147 intergenic not near genes chr3R_8_8570001 chr3R_8570001 RAL-373_125b 2454 chr3R 8596236 8596299 chr3R 8596397 8596449 9 159 17.5 19.0 18.2 0.5 213 chr3R 8596236 intron 5-HT2B + chr3R 8596342 intron 5-HT2B + chr3R 8596449 intron 5-HT2B + chr3R_9_8595001 chr3R_8595001 RAL-373_125b 2455 chr3R 8601731 8601795 chr3R 8610934 8610971 roo 29 9193 7.5 8.0 7.8 3.3 9240 chr3R 8601731 intron 5-HT2B + chr3R 8606351 intron 5-HT2B + chr3R 8610971 intron 5-HT2B + chr3R_29_8605001 chr3R_8605001 RAL-373_125b 2456 chr3R 8630873 8630928 chr3R 8631019 8631079 8 153 7.5 6.0 6.8 1.0 206 chr3R 8630873 intergenic not near genes chr3R 8630976 intergenic not near genes chr3R 8631079 intergenic not near genes chr3R_8_8630001 chr3R_8630001 RAL-373_125b 2457 chr3R 8642373 8642440 chr3R 8642494 8642567 5 125 16.0 12.5 14.2 0.3 194 chr3R 8642373 intergenic not near genes chr3R 8642470 intergenic not near genes chr3R 8642567 intergenic not near genes chr3R_5_8640001 chr3R_8640001 RAL-373_125b 2458 chr3R 8689557 8689628 chr3R 8689685 8689756 10 120 19.0 17.0 18.0 0.5 199 chr3R 8689557 intergenic not near genes chr3R 8689656 intergenic not near genes chr3R 8689756 intergenic not near genes chr3R_10_8685001 chr3R_8685001 RAL-373_125b 2459 chr3R 8707323 8707383 chr3R 8709800 8709853 jockey 22 2486 8.0 7.5 7.8 2.5 2530 chr3R 8707323 intergenic not near genes chr3R 8708588 intergenic not near genes chr3R 8709853 intergenic not near genes chr3R_22_8705001 chr3R_8705001 RAL-373_125b 2460 chr3R 8725110 8725157 chr3R 8725246 8725290 5 135 15.5 16.5 16.0 0.3 180 chr3R 8725110 3` UTR CG8145 + chr3R 8725200 3` UTR CG8145 + chr3R 8725290 3` UTR CG8145 + chr3R_5_8725001 chr3R_8725001 RAL-373_125b 2461 chr3R 8745725 8745766 chr3R 8745886 8745922 9 158 19.5 23.5 21.5 0.4 197 chr3R 8745725 intron CG9801 - chr3R 8745824 intron CG9801 - chr3R 8745922 intron CG9801 - chr3R_9_8745001 chr3R_8745001 RAL-373_125b 2462 chr3R 8768979 8769017 chr3R 8769269 8769314 6 302 17.5 15.5 16.5 0.3 335 chr3R 8768979 intergenic CG8236 + chr3R 8769146 intergenic CG8236 + chr3R 8769314 intergenic CG8236 + chr3R_6_8765001 chr3R_8765001 RAL-373_125b 2463 chr3R 8827481 8827528 chr3R 8827607 8827654 9 125 12.0 12.5 12.2 0.7 173 chr3R 8827481 intergenic pyd -,CG8379 + chr3R 8827568 3` UTR pyd - chr3R 8827654 3` UTR pyd - chr3R_9_8825001 chr3R_8825001 RAL-373_125b 2464 chr3R 8863589 8863658 chr3R 8863755 8863813 13 159 14.5 15.5 15.0 0.8 224 chr3R 8863589 intron pyd - chr3R 8863701 intron pyd - chr3R 8863813 intron pyd - chr3R_13_8860001 chr3R_8860001 RAL-373_125b 2465 chr3R 8882013 8882086 chr3R 8882154 8882222 10 140 14.5 13.5 14.0 0.7 209 chr3R 8882013 intron pyd - chr3R 8882118 intron pyd - chr3R 8882222 intron pyd - chr3R_10_8880001 chr3R_8880001 RAL-373_125b 2466 chr3R 8894839 8894879 chr3R 8896045 8896085 1360 6 1206 15.0 15.0 15.0 0.4 1246 chr3R 8894839 intron pyd - chr3R 8895462 intron pyd - chr3R 8896085 intron pyd - chr3R_6_8895001 chr3R_8895001 RAL-373_125b 2467 chr3R 8898183 8898211 chr3R 8913812 8913842 297 7 15627 10.5 2.0 6.2 1.0 15659 chr3R 8898183 intron pyd - chr3R 8906012 intron pyd - chr3R 8913842 intron pyd - chr3R_7_8905001 chr3R_8905001 RAL-373_125b 2468 chr3R 8948259 8948312 chr3R 8948419 8948472 5 158 8.5 9.5 9.0 0.5 213 chr3R 8948259 intergenic not near genes chr3R 8948366 intergenic not near genes chr3R 8948472 intergenic not near genes chr3R_5_8945001 chr3R_8945001 RAL-373_125b 2469 chr3R 8969908 8969945 chr3R 8970048 8970086 11 138 15.5 18.0 16.8 0.6 178 chr3R 8969908 intergenic not near genes chr3R 8969997 intergenic not near genes chr3R 8970086 intergenic not near genes chr3R_11_8965001 chr3R_8965001 RAL-373_125b 2470 chr3R 9043705 9043762 chr3R 9043833 9043894 7 128 18.0 18.0 18.0 0.4 189 chr3R 9043705 intron Nmdmc - chr3R 9043800 intron Nmdmc - chr3R 9043894 intron Nmdmc - chr3R_7_9040001 chr3R_9040001 RAL-373_125b 2471 chr3R 9082013 9082063 chr3R 9082138 9082207 13 132 18.5 19.0 18.8 0.7 194 chr3R 9082013 intron pum - chr3R 9082110 intron pum - chr3R 9082207 intron pum - chr3R_13_9080001 chr3R_9080001 RAL-373_125b 2472 chr3R 9083105 9083165 chr3R 9083228 9083288 5 127 10.0 11.0 10.5 0.4 183 chr3R 9083105 intron pum - chr3R 9083196 intron pum - chr3R 9083288 intron pum - chr3R_5_9080001 chr3R_9080001 RAL-373_125b 2473 chr3R 9087280 9087340 chr3R 9087409 9087469 8 128 12.0 11.0 11.5 0.6 189 chr3R 9087280 intron pum - chr3R 9087374 intron pum - chr3R 9087469 intron pum - chr3R_8_9085001 chr3R_9085001 RAL-373_125b 2474 chr3R 9099440 9099477 chr3R 9099558 9099610 4 128 15.5 14.5 15.0 0.2 170 chr3R 9099440 intron pum - chr3R 9099525 intron pum - chr3R 9099610 intron pum - chr3R_4_9095001 chr3R_9095001 RAL-373_125b 2475 chr3R 9101801 9101863 chr3R 9101945 9102006 12 143 10.5 14.5 12.5 0.9 205 chr3R 9101801 intron pum - chr3R 9101904 intron pum - chr3R 9102006 intron pum - chr3R_12_9100001 chr3R_9100001 RAL-373_125b 2476 chr3R 9108818 9108883 chr3R 9108944 9109009 28 124 5.5 5.0 5.2 4.5 191 chr3R 9108818 intron pum - chr3R 9108914 intron pum - chr3R 9109009 intron pum - chr3R_28_9105001 chr3R_9105001 RAL-373_125b 2477 chr3R 9141121 9141188 chr3R 9141260 9141282 10 133 16.5 14.0 15.2 0.6 161 chr3R 9141121 intron pum - chr3R 9141202 intron pum - chr3R 9141282 intron pum - chr3R_10_9140001 chr3R_9140001 RAL-373_125b 2478 chr3R 9150881 9150940 chr3R 9151018 9151084 5 142 8.5 9.5 9.0 0.5 203 chr3R 9150881 intron pum - chr3R 9150982 intron pum - chr3R 9151084 intron pum - chr3R_5_9150001 chr3R_9150001 RAL-373_125b 2479 chr3R 9171881 9171933 chr3R 9172296 9172349 5 415 11.5 7.0 9.2 0.5 468 chr3R 9171881 intron pum - chr3R 9172115 intron pum - chr3R 9172349 intron pum - chr3R_5_9170001 chr3R_9170001 RAL-373_125b 2480 chr3R 9203991 9204055 chr3R 9204420 9204486 9 435 19.5 16.5 18.0 0.5 495 chr3R 9203991 intron pum - chr3R 9204238 intron pum - chr3R 9204486 intron pum - chr3R_9_9200001 chr3R_9200001 RAL-373_125b 2481 chr3R 9278743 9278794 chr3R 9284053 9284104 Rt1a 11 5305 6.5 15.5 11.0 0.9 5361 chr3R 9278743 intergenic not near genes chr3R 9281424 intergenic not near genes chr3R 9284104 intergenic not near genes chr3R_11_9280001 chr3R_9280001 RAL-373_125b 2482 chr3R 9298200 9298252 chr3R 9298323 9298385 6 133 14.0 19.5 16.8 0.3 185 chr3R 9298200 intron CG8861 - chr3R 9298292 intron CG8861 - chr3R 9298385 intron CG8861 - chr3R_6_9295001 chr3R_9295001 RAL-373_125b 2483 chr3R 9319545 9319585 chr3R 9320019 9320069 jockey 7 483 19.0 8.5 13.8 0.5 524 chr3R 9319545 intron CG8861 - chr3R 9319807 intron CG8861 - chr3R 9320069 intron CG8861 - chr3R_7_9315001 chr3R_9315001 RAL-373_125b 2484 chr3R 9419835 9419899 chr3R 9419984 9420048 10 147 17.5 19.0 18.2 0.5 213 chr3R 9419835 intron ps + chr3R 9419942 intron ps + chr3R 9420048 intron ps + chr3R_10_9415001 chr3R_9415001 RAL-373_125b 2485 chr3R 9523970 9524027 chr3R 9524106 9524158 10 134 18.5 18.5 18.5 0.5 188 chr3R 9523970 intron CG8176 + chr3R 9524064 intron CG8176 + chr3R 9524158 intron CG8176 + chr3R_10_9520001 chr3R_9520001 RAL-373_125b 2486 chr3R 9672272 9672301 chr3R 9672385 9672434 4 130 15.5 16.0 15.8 0.2 162 chr3R 9672272 exon CG9492 - chr3R 9672353 exon CG9492 - chr3R 9672434 intron CG9492 - chr3R_4_9670001 chr3R_9670001 RAL-373_125b 2487 chr3R 9699963 9699976 chr3R 9700102 9700115 1360 4 139 23.0 23.0 23.0 0.2 152 chr3R 9699963 intron Unc-115a - chr3R 9700039 intron Unc-115a - chr3R 9700115 intron Unc-115a - chr3R_4_9700001 chr3R_9700001 RAL-373_125b 2488 chr3R 9699986 9699998 chr3R 9700100 9700118 1360 5 127 22.0 24.0 23.0 0.2 132 chr3R 9699986 intron Unc-115a - chr3R 9700052 intron Unc-115a - chr3R 9700118 intron Unc-115a - chr3R_5_9700001 chr3R_9700001 RAL-373_125b 2489 chr3R 9702239 9702291 chr3R 9702350 9702371 4 109 16.5 18.5 17.5 0.2 132 chr3R 9702239 intron Unc-115a - chr3R 9702305 intron Unc-115a - chr3R 9702371 intron Unc-115a - chr3R_4_9700001 chr3R_9700001 RAL-373_125b 2490 chr3R 9739879 9739942 chr3R 9741871 9741917 11 1984 18.5 31.5 25.0 0.4 2038 chr3R 9739879 5` UTR CG12950 - chr3R 9740898 5` UTR Pnn + chr3R 9741917 exon Pnn + chr3R_11_9740001 chr3R_9740001 RAL-373_125b 2491 chr3R 9739259 9739301 chr3R 9742276 9742318 9 3020 44.0 34.5 39.2 0.2 3059 chr3R 9739259 exon CG12950 - chr3R 9740788 intergenic Pnn + chr3R 9742318 3` UTR Pnn + chr3R_9_9740001 chr3R_9740001 RAL-373_125b 2492 chr3R 9765886 9765930 chr3R 9766001 9766051 5 119 15.5 18.5 17.0 0.3 165 chr3R 9765886 3` UTR CG8478 + chr3R 9765968 3` UTR CG8478 + chr3R 9766051 3` UTR,3` UTR CG8478 +,MED6 - chr3R_5_9765001 chr3R_9765001 RAL-373_125b 2493 chr3R 9836841 9836893 chr3R 9836963 9837030 16 130 6.5 6.5 6.5 2.1 189 chr3R 9836841 intron Teh1 - chr3R 9836936 intron Teh1 - chr3R 9837030 intron Teh1 - chr3R_16_9835001 chr3R_9835001 RAL-373_125b 2494 chr3R 9859959 9860002 chr3R 9860121 9860166 8 163 15.0 12.0 13.5 0.6 207 chr3R 9859959 intron Teh1 - chr3R 9860062 intron Teh1 - chr3R 9860166 intron Teh1 - chr3R_8_9860001 chr3R_9860001 RAL-373_125b 2495 chr3R 9877983 9878014 chr3R 9878116 9878143 11 131 8.0 5.0 6.5 1.5 160 chr3R 9877983 intron,intron Glut4EF +,CR45029 - chr3R 9878063 intron,intron Glut4EF +,CR45029 - chr3R 9878143 intron,3` UTR Glut4EF +,CR45029 - chr3R_11_9875001 chr3R_9875001 RAL-373_125b 2496 chr3R 9878016 9878022 chr3R 9878113 9878143 4 123 8.0 5.0 6.5 0.5 127 chr3R 9878016 intron,intron Glut4EF +,CR45029 - chr3R 9878080 intron,intron Glut4EF +,CR45029 - chr3R 9878143 intron,3` UTR Glut4EF +,CR45029 - chr3R_4_9875001 chr3R_9875001 RAL-373_125b 2497 chr3R 9893292 9893296 chr3R 9893634 9893654 4 368 12.5 14.5 13.5 0.3 362 chr3R 9893292 intron Glut4EF + chr3R 9893473 intron Glut4EF + chr3R 9893654 intron Glut4EF + chr3R_4_9890001 chr3R_9890001 RAL-373_125b 2498 chr3R 9898740 9898816 chr3R 9898882 9898958 9 140 10.5 12.0 11.2 0.7 218 chr3R 9898740 intron Glut4EF + chr3R 9898849 intron Glut4EF + chr3R 9898958 intron Glut4EF + chr3R_9_9895001 chr3R_9895001 RAL-373_125b 2499 chr3R 9996270 9996320 chr3R 9996658 9996708 9 387 18.5 17.5 18.0 0.5 438 chr3R 9996270 exon Gr85a - chr3R 9996489 exon Gr85a - chr3R 9996708 exon Gr85a - chr3R_9_9995001 chr3R_9995001 RAL-373_125b 2500 chr3R 10022009 10022030 chr3R 10022146 10022174 6 142 14.0 15.0 14.5 0.4 165 chr3R 10022009 intron Mical - chr3R 10022092 intron Mical - chr3R 10022174 intron Mical - chr3R_6_10020001 chr3R_10020001 RAL-373_125b 2501 chr3R 10080414 10080440 chr3R 10080561 10080587 6 147 28.0 15.0 21.5 0.3 173 chr3R 10080414 intergenic not near genes chr3R 10080500 intergenic not near genes chr3R 10080587 intergenic not near genes chr3R_6_10080001 chr3R_10080001 RAL-373_125b 2502 chr3R 10140396 10140460 chr3R 10140526 10140536 6 124 22.5 20.5 21.5 0.3 140 chr3R 10140396 3` UTR TAF1B - chr3R 10140466 3` UTR TAF1B - chr3R 10140536 3` UTR TAF1B - chr3R_6_10140001 chr3R_10140001 RAL-373_125b 2503 chr3R 10231739 10231802 chr3R 10237366 10237392 mdg3 14 5623 12.5 6.0 9.2 1.4 5653 chr3R 10231739 intron CG42795 + chr3R 10234566 intron CG42795 + chr3R 10237392 intron CG42795 + chr3R_14_10230001 chr3R_10230001 RAL-373_125b 2504 chr3R 10255333 10255376 chr3R 10260823 10260858 I-element 7 5486 3.5 4.5 4.0 1.4 5525 chr3R 10255333 intergenic Sirt6 -,CG3999 + chr3R 10258096 intron Sirt6 - chr3R 10260858 exon Sirt6 - chr3R_7_10255001 chr3R_10255001 RAL-373_125b 2505 chr3R 10274008 10274030 chr3R 10274162 10274199 5 158 13.0 7.0 10.0 0.5 191 chr3R 10274008 intron CG43143 + chr3R 10274104 intron CG43143 + chr3R 10274199 intron CG43143 + chr3R_5_10270001 chr3R_10270001 RAL-373_125b 2506 chr3R 10277102 10277152 chr3R 10277217 10277275 6 126 10.5 9.0 9.8 0.6 173 chr3R 10277102 intron CG43143 + chr3R 10277188 intron CG43143 + chr3R 10277275 intron CG43143 + chr3R_6_10275001 chr3R_10275001 RAL-373_125b 2507 chr3R 10306973 10307008 chr3R 10312182 10312235 15 5212 34.0 31.5 32.8 0.4 5262 chr3R 10306973 exon CG43143 + chr3R 10309604 exon CG6293 - chr3R 10312235 3` UTR Bruce - chr3R_15_10305001 chr3R_10305001 RAL-373_125b 2508 chr3R 10394031 10394094 chr3R 10394180 10394238 9 145 15.0 17.5 16.2 0.5 207 chr3R 10394031 intron cwo + chr3R 10394134 intron cwo + chr3R 10394238 intron cwo + chr3R_9_10390001 chr3R_10390001 RAL-373_125b 2509 chr3R 10427373 10427441 chr3R 10427533 10427601 8 158 3.5 1.5 2.5 2.3 228 chr3R 10427373 intergenic not near genes chr3R 10427487 intergenic not near genes chr3R 10427601 intergenic not near genes chr3R_8_10425001 chr3R_10425001 RAL-373_125b 2510 chr3R 10430633 10430692 chr3R 10430771 10430831 15 134 8.0 8.5 8.2 1.6 198 chr3R 10430633 intergenic not near genes chr3R 10430732 intergenic not near genes chr3R 10430831 intergenic not near genes chr3R_15_10430001 chr3R_10430001 RAL-373_125b 2511 chr3R 10501462 10501483 chr3R 10501588 10501609 5 125 21.0 17.5 19.2 0.2 147 chr3R 10501462 intergenic not near genes chr3R 10501536 intergenic not near genes chr3R 10501609 intergenic not near genes chr3R_5_10500001 chr3R_10500001 RAL-373_125b 2512 chr3R 10501487 10501508 chr3R 10501583 10501609 4 104 20.0 16.5 18.2 0.2 122 chr3R 10501487 intergenic not near genes chr3R 10501548 intergenic not near genes chr3R 10501609 intergenic not near genes chr3R_4_10500001 chr3R_10500001 RAL-373_125b 2513 chr3R 10531848 10531869 chr3R 10531959 10532000 7 126 8.0 8.0 8.0 0.8 152 chr3R 10531848 intron hth - chr3R 10531924 intron hth - chr3R 10532000 intron hth - chr3R_7_10530001 chr3R_10530001 RAL-373_125b 2514 chr3R 10535295 10535321 chr3R 10535428 10535458 5 140 7.0 7.0 7.0 0.6 163 chr3R 10535295 intron hth - chr3R 10535376 intron hth - chr3R 10535458 intron hth - chr3R_5_10535001 chr3R_10535001 RAL-373_125b 2515 chr3R 10561766 10561820 chr3R 10561899 10561960 10 134 17.5 13.0 15.2 0.6 194 chr3R 10561766 intron hth - chr3R 10561863 intron hth - chr3R 10561960 exon hth - chr3R_10_10560001 chr3R_10560001 RAL-373_125b 2516 chr3R 10596619 10596633 chr3R 10596701 10596729 4 95 16.0 13.5 14.8 0.3 110 chr3R 10596619 intron hth - chr3R 10596674 intron hth - chr3R 10596729 intron hth - chr3R_4_10595001 chr3R_10595001 RAL-373_125b 2517 chr3R 10651828 10651836 chr3R 10651915 10651984 4 130 16.0 16.5 16.2 0.2 156 chr3R 10651828 intergenic not near genes chr3R 10651906 intergenic not near genes chr3R 10651984 intergenic not near genes chr3R_4_10650001 chr3R_10650001 RAL-373_125b 2518 chr3R 10723722 10723780 chr3R 10723859 10723887 8 134 16.0 12.0 14.0 0.5 165 chr3R 10723722 intergenic not near genes chr3R 10723804 intergenic not near genes chr3R 10723887 intergenic not near genes chr3R_8_10720001 chr3R_10720001 RAL-373_125b 2519 chr3R 10727597 10727676 chr3R 10727725 10727799 16 123 15.0 17.5 16.2 0.9 202 chr3R 10727597 intergenic not near genes chr3R 10727698 intergenic not near genes chr3R 10727799 intergenic not near genes chr3R_16_10725001 chr3R_10725001 RAL-373_125b 2520 chr3R 10732286 10732344 chr3R 10733203 10733266 5 921 12.0 15.5 13.8 0.3 980 chr3R 10732286 intergenic not near genes chr3R 10732776 intergenic not near genes chr3R 10733266 intergenic not near genes chr3R_5_10730001 chr3R_10730001 RAL-373_125b 2521 chr3R 10804139 10804178 chr3R 10811716 10811755 17.6 5 7579 11.0 12.0 11.5 0.4 7616 chr3R 10804139 intergenic CG14692 - chr3R 10807947 intergenic not near genes chr3R 10811755 3` UTR CG14693 - chr3R_5_10805001 chr3R_10805001 RAL-373_125b 2522 chr3R 10904860 10904936 chr3R 10905114 10905190 9 251 12.5 12.0 12.2 0.7 330 chr3R 10904860 intergenic not near genes chr3R 10905025 intergenic not near genes chr3R 10905190 intergenic not near genes chr3R_9_10905001 chr3R_10905001 RAL-373_125b 2523 chr3R 10906785 10906857 chr3R 10906911 10906983 17 117 3.5 5.5 4.5 3.1 198 chr3R 10906785 intergenic not near genes chr3R 10906884 intergenic not near genes chr3R 10906983 intergenic not near genes chr3R_17_10905001 chr3R_10905001 RAL-373_125b 2524 chr3R 10919642 10919715 chr3R 10919770 10919836 21 126 5.5 3.0 4.2 4.0 194 chr3R 10919642 intergenic not near genes chr3R 10919739 intergenic not near genes chr3R 10919836 intergenic not near genes chr3R_21_10915001 chr3R_10915001 RAL-373_125b 2525 chr3R 10920002 10920068 chr3R 10920130 10920191 8 127 5.0 4.0 4.5 1.5 189 chr3R 10920002 intergenic not near genes chr3R 10920096 intergenic not near genes chr3R 10920191 intergenic not near genes chr3R_8_10920001 chr3R_10920001 RAL-373_125b 2526 chr3R 10957820 10957884 chr3R 10963259 10963316 Rt1c 22 5429 3.0 2.5 2.8 5.8 5496 chr3R 10957820 intergenic not near genes chr3R 10960568 intergenic not near genes chr3R 10963316 intergenic not near genes chr3R_22_10960001 chr3R_10960001 RAL-373_125b 2527 chr3R 10971445 10971505 chr3R 10971586 10971637 8 136 11.5 9.5 10.5 0.7 192 chr3R 10971445 intergenic not near genes chr3R 10971541 intergenic not near genes chr3R 10971637 intergenic not near genes chr3R_8_10970001 chr3R_10970001 RAL-373_125b 2528 chr3R 10992047 10992076 chr3R 10992248 10992286 6 202 29.5 36.5 33.0 0.2 239 chr3R 10992047 intron CG34114 + chr3R 10992166 intron CG34114 + chr3R 10992286 intron CG34114 + chr3R_6_10990001 chr3R_10990001 RAL-373_125b 2529 chr3R 10994235 10994309 chr3R 10994364 10994438 8 128 13.0 12.0 12.5 0.6 203 chr3R 10994235 intron CG34114 + chr3R 10994336 intron CG34114 + chr3R 10994438 intron CG34114 + chr3R_8_10990001 chr3R_10990001 RAL-373_125b 2530 chr3R 10998428 10998468 chr3R 10998555 10998589 7 121 9.5 10.5 10.0 0.6 161 chr3R 10998428 intron CG34114 + chr3R 10998508 intron CG34114 + chr3R 10998589 intron CG34114 + chr3R_7_10995001 chr3R_10995001 RAL-373_125b 2531 chr3R 11043072 11043110 chr3R 11043228 11043236 9 151 9.5 10.0 9.8 0.8 164 chr3R 11043072 intron CG34114 + chr3R 11043154 intron CG34114 + chr3R 11043236 intron CG34114 + chr3R_9_11040001 chr3R_11040001 RAL-373_125b 2532 chr3R 11056849 11056890 chr3R 11056972 11057018 5 127 15.5 10.0 12.8 0.4 169 chr3R 11056849 intergenic not near genes chr3R 11056934 intergenic not near genes chr3R 11057018 intergenic not near genes chr3R_5_11055001 chr3R_11055001 RAL-373_125b 2533 chr3R 11087409 11087458 chr3R 11087514 11087584 9 118 13.5 13.5 13.5 0.6 175 chr3R 11087409 intergenic not near genes chr3R 11087496 intergenic not near genes chr3R 11087584 intergenic not near genes chr3R_9_11085001 chr3R_11085001 RAL-373_125b 2534 chr3R 11099609 11099670 chr3R 11099791 11099852 10 180 11.0 12.5 11.8 0.8 243 chr3R 11099609 intergenic not near genes chr3R 11099730 intergenic not near genes chr3R 11099852 intergenic not near genes chr3R_10_11095001 chr3R_11095001 RAL-373_125b 2535 chr3R 11102302 11102325 chr3R 11102422 11102434 6 119 15.5 16.0 15.8 0.4 132 chr3R 11102302 intergenic not near genes chr3R 11102368 intergenic not near genes chr3R 11102434 intergenic not near genes chr3R_6_11100001 chr3R_11100001 RAL-373_125b 2536 chr3R 11104938 11104998 chr3R 11105066 11105134 7 131 12.5 14.5 13.5 0.5 196 chr3R 11104938 intergenic not near genes chr3R 11105036 intergenic not near genes chr3R 11105134 intergenic not near genes chr3R_7_11105001 chr3R_11105001 RAL-373_125b 2537 chr3R 11111509 11111557 chr3R 11111880 11111924 7 369 13.5 14.5 14.0 0.5 415 chr3R 11111509 intergenic not near genes chr3R 11111716 intergenic not near genes chr3R 11111924 intergenic not near genes chr3R_7_11110001 chr3R_11110001 RAL-373_125b 2538 chr3R 11151675 11151702 chr3R 11156518 11156550 5 4847 21.0 22.5 21.8 0.2 4875 chr3R 11151675 3` UTR Ugt86Di - chr3R 11154112 intergenic Ugt86Di - chr3R 11156550 intergenic Ugt86Dc + chr3R_5_11150001 chr3R_11150001 RAL-373_125b 2539 chr3R 11220234 11220294 chr3R 11220403 11220463 10 166 18.0 18.0 18.0 0.5 229 chr3R 11220234 intergenic CG6693 -,CG6689 - chr3R 11220348 3` UTR CG6693 - chr3R 11220463 3` UTR CG6693 - chr3R_10_11220001 chr3R_11220001 RAL-373_125b 2540 chr3R 11242227 11242256 chr3R 11242359 11242384 5 132 19.5 20.5 20.0 0.2 157 chr3R 11242227 3` UTR CG17734 - chr3R 11242306 3` UTR CG17734 - chr3R 11242384 3` UTR CG17734 - chr3R_5_11240001 chr3R_11240001 RAL-373_125b 2541 chr3R 11247202 11247227 chr3R 11247328 11247336 INE-1 9 123 8.0 3.0 5.5 1.4 134 chr3R 11247202 intergenic CG5214 +,CR43283 - chr3R 11247269 intergenic CR43283 -,CG5214 + chr3R 11247336 intergenic CR43283 -,CG5214 + chr3R_9_11245001 chr3R_11245001 RAL-373_125b 2542 chr3R 11307167 11307188 chr3R 11307289 11307325 5 130 15.5 14.5 15.0 0.3 158 chr3R 11307167 intergenic not near genes chr3R 11307246 intergenic not near genes chr3R 11307325 intergenic not near genes chr3R_5_11305001 chr3R_11305001 RAL-373_125b 2543 chr3R 11313202 11313244 chr3R 11313326 11313383 9 134 12.5 12.5 12.5 0.7 181 chr3R 11313202 intergenic not near genes chr3R 11313292 intergenic not near genes chr3R 11313383 intergenic not near genes chr3R_9_11310001 chr3R_11310001 RAL-373_125b 2544 chr3R 11342522 11342568 chr3R 11342648 11342687 6 123 19.5 20.0 19.8 0.3 165 chr3R 11342522 intron pros + chr3R 11342604 intron pros + chr3R 11342687 intron pros + chr3R_6_11340001 chr3R_11340001 RAL-373_125b 2545 chr3R 11379192 11379219 chr3R 11388397 11388424 roo 10 9204 6.5 6.0 6.2 1.4 9232 chr3R 11379192 intron pros + chr3R 11383808 intron pros + chr3R 11388424 intron pros + chr3R_10_11380001 chr3R_11380001 RAL-373_125b 2546 chr3R 11406250 11406317 chr3R 11406377 11406444 7 125 12.0 15.0 13.5 0.5 194 chr3R 11406250 3` UTR pros + chr3R 11406347 3` UTR pros + chr3R 11406444 3` UTR pros + chr3R_7_11405001 chr3R_11405001 RAL-373_125b 2547 chr3R 11518773 11518843 chr3R 11518914 11518971 19 136 5.5 6.0 5.8 2.8 198 chr3R 11518773 intergenic not near genes chr3R 11518872 intergenic not near genes chr3R 11518971 intergenic not near genes chr3R_19_11515001 chr3R_11515001 RAL-373_125b 2548 chr3R 11570046 11570085 chr3R 11575634 11575650 5 5570 17.5 37.0 27.2 0.2 5604 chr3R 11570046 intron Mrp4 + chr3R 11572848 exon Mrp4 + chr3R 11575650 exon Mrp4 + chr3R_5_11570001 chr3R_11570001 RAL-373_125b 2549 chr3R 11597354 11597407 chr3R 11597474 11597490 9 126 17.5 17.0 17.2 0.5 136 chr3R 11597354 intron Jupiter - chr3R 11597422 intron Jupiter - chr3R 11597490 intron Jupiter - chr3R_9_11595001 chr3R_11595001 RAL-373_125b 2550 chr3R 11634254 11634300 chr3R 11634379 11634429 13 129 19.0 18.0 18.5 0.7 175 chr3R 11634254 3` UTR Csk - chr3R 11634342 3` UTR Csk - chr3R 11634429 3` UTR Csk - chr3R_13_11630001 chr3R_11630001 RAL-373_125b 2551 chr3R 11694686 11694751 chr3R 11694829 11694850 14 139 2.5 4.0 3.2 3.3 164 chr3R 11694686 intergenic Fer3 - chr3R 11694768 intergenic Fer3 - chr3R 11694850 intergenic not near genes chr3R_14_11690001 chr3R_11690001 RAL-373_125b 2552 chr3R 11695703 11695757 chr3R 11695830 11695877 16 122 7.0 6.0 6.5 2.1 174 chr3R 11695703 intergenic not near genes chr3R 11695790 intergenic not near genes chr3R 11695877 intergenic not near genes chr3R_16_11695001 chr3R_11695001 RAL-373_125b 2553 chr3R 11710183 11710222 chr3R 11710302 11710344 9 122 13.5 13.0 13.2 0.6 161 chr3R 11710183 intergenic not near genes chr3R 11710264 intergenic not near genes chr3R 11710344 intergenic not near genes chr3R_9_11710001 chr3R_11710001 RAL-373_125b 2554 chr3R 11734121 11734184 chr3R 11734281 11734343 15 156 15.0 7.0 11.0 1.2 222 chr3R 11734121 intergenic not near genes chr3R 11734232 intergenic not near genes chr3R 11734343 intergenic not near genes chr3R_15_11730001 chr3R_11730001 RAL-373_125b 2555 chr3R 11761181 11761231 chr3R 11761347 11761391 10 167 13.5 15.0 14.2 0.7 210 chr3R 11761181 intron Lk6 - chr3R 11761286 intron Lk6 - chr3R 11761391 intron Lk6 - chr3R_10_11760001 chr3R_11760001 RAL-373_125b 2556 chr3R 11830316 11830357 chr3R 11830450 11830486 10 132 17.0 11.5 14.2 0.7 170 chr3R 11830316 intron CG6959 - chr3R 11830401 intron CG6959 - chr3R 11830486 intron CG6959 - chr3R_10_11830001 chr3R_11830001 RAL-373_125b 2557 chr3R 11841030 11841084 chr3R 11846256 11846325 BS 16 5236 8.5 4.0 6.2 2.2 5295 chr3R 11841030 intron CG6959 - chr3R 11843678 intron CG6959 - chr3R 11846325 intron CG6959 - chr3R_16_11840001 chr3R_11840001 RAL-373_125b 2558 chr3R 11853389 11853468 chr3R 11853587 11853673 13 204 1.5 3.0 2.2 4.1 284 chr3R 11853389 intron CG6959 - chr3R 11853531 intron CG6959 - chr3R 11853673 intron CG6959 - chr3R_13_11850001 chr3R_11850001 RAL-373_125b 2559 chr3R 11853733 11853780 chr3R 11853883 11853935 9 154 17.5 20.0 18.8 0.5 202 chr3R 11853733 intron CG6959 - chr3R 11853834 intron CG6959 - chr3R 11853935 intron CG6959 - chr3R_9_11850001 chr3R_11850001 RAL-373_125b 2560 chr3R 11881895 11881951 chr3R 11886584 11886627 10 4670 41.5 32.0 36.8 0.3 4732 chr3R 11881895 exon CG6962 - chr3R 11884261 intron,exon CG31368 +,mthl5 - chr3R 11886627 intron,exon CG31368 +,mthl5 - chr3R_10_11880001 chr3R_11880001 RAL-373_125b 2561 chr3R 11909323 11909367 chr3R 11909453 11909472 4 120 16.0 16.5 16.2 0.2 149 chr3R 11909323 intron Cad87A - chr3R 11909398 intron Cad87A - chr3R 11909472 intron Cad87A - chr3R_4_11905001 chr3R_11905001 RAL-373_125b 2562 chr3R 11909370 11909388 chr3R 11909445 11909471 5 103 14.5 16.0 15.2 0.3 101 chr3R 11909370 intron Cad87A - chr3R 11909420 intron Cad87A - chr3R 11909471 intron Cad87A - chr3R_5_11905001 chr3R_11905001 RAL-373_125b 2563 chr3R 11957816 11957876 chr3R 11958148 11958204 S-element 8 330 5.5 0.0 2.8 2.1 388 chr3R 11957816 intergenic not near genes chr3R 11958010 intergenic not near genes chr3R 11958204 intergenic not near genes chr3R_8_11955001 chr3R_11955001 RAL-373_125b 2564 chr3R 11998917 11998965 chr3R 11999082 11999130 7 165 12.5 15.0 13.8 0.5 213 chr3R 11998917 intron Tk - chr3R 11999024 intron Tk - chr3R 11999130 intron Tk - chr3R_7_11995001 chr3R_11995001 RAL-373_125b 2565 chr3R 12017005 12017012 chr3R 12017132 12017132 4 125 12.0 16.0 14.0 0.3 127 chr3R 12017005 5` UTR CG3313 - chr3R 12017068 intergenic CG3313 -,Spt3 + chr3R 12017132 intergenic Spt3 +,CG3313 - chr3R_4_12015001 chr3R_12015001 RAL-373_125b 2566 chr3R 12022834 12022911 chr3R 12025060 12025129 pogo 24 2226 3.0 4.5 3.8 5.0 2295 chr3R 12022834 intergenic not near genes chr3R 12023982 intergenic not near genes chr3R 12025129 intergenic not near genes chr3R_24_12020001 chr3R_12020001 RAL-373_125b 2567 chr3R 12045126 12045202 chr3R 12045252 12045318 24 124 5.0 3.5 4.2 4.6 192 chr3R 12045126 intergenic not near genes chr3R 12045222 intergenic not near genes chr3R 12045318 intergenic not near genes chr3R_24_12045001 chr3R_12045001 RAL-373_125b 2568 chr3R 12052365 12052403 chr3R 12052491 12052517 6 116 13.0 10.0 11.5 0.5 152 chr3R 12052365 intergenic not near genes chr3R 12052441 intergenic not near genes chr3R 12052517 intergenic not near genes chr3R_6_12050001 chr3R_12050001 RAL-373_125b 2569 chr3R 12080850 12080873 chr3R 12080972 12081001 5 124 15.5 20.0 17.8 0.3 151 chr3R 12080850 intron CG14741 - chr3R 12080926 intron CG14741 - chr3R 12081001 intron CG14741 - chr3R_5_12080001 chr3R_12080001 RAL-373_125b 2570 chr3R 12081966 12081997 chr3R 12082085 12082123 4 120 10.0 12.0 11.0 0.3 157 chr3R 12081966 intron CG14741 - chr3R 12082044 intron CG14741 - chr3R 12082123 intron CG14741 - chr3R_4_12080001 chr3R_12080001 RAL-373_125b 2571 chr3R 12102858 12102871 chr3R 12102980 12102994 4 121 13.0 16.0 14.5 0.3 136 chr3R 12102858 intron dpr17 + chr3R 12102926 intron dpr17 + chr3R 12102994 intron dpr17 + chr3R_4_12100001 chr3R_12100001 RAL-373_125b 2572 chr3R 12111834 12111910 chr3R 12111969 12112025 8 122 10.5 13.5 12.0 0.6 191 chr3R 12111834 intergenic dpr17 + chr3R 12111930 intergenic not near genes chr3R 12112025 intergenic not near genes chr3R_8_12110001 chr3R_12110001 RAL-373_125b 2573 chr3R 12154042 12154063 chr3R 12154438 12154488 4 406 22.5 27.5 25.0 0.2 446 chr3R 12154042 intron dpr15 - chr3R 12154265 intron dpr15 - chr3R 12154488 intron dpr15 - chr3R_4_12150001 chr3R_12150001 RAL-373_125b 2574 chr3R 12183143 12183200 chr3R 12183279 12183336 4 136 12.5 12.5 12.5 0.3 193 chr3R 12183143 intergenic not near genes chr3R 12183240 intergenic not near genes chr3R 12183336 intergenic not near genes chr3R_4_12180001 chr3R_12180001 RAL-373_125b 2575 chr3R 12200751 12200787 chr3R 12200962 12200988 5 216 11.5 18.5 15.0 0.3 237 chr3R 12200751 intergenic not near genes chr3R 12200870 intergenic not near genes chr3R 12200988 intergenic not near genes chr3R_5_12200001 chr3R_12200001 RAL-373_125b 2576 chr3R 12247095 12247152 chr3R 12247226 12247281 6 132 16.0 14.0 15.0 0.4 186 chr3R 12247095 intergenic not near genes chr3R 12247188 intergenic not near genes chr3R 12247281 intergenic not near genes chr3R_6_12245001 chr3R_12245001 RAL-373_125b 2577 chr3R 12267821 12267874 chr3R 12267951 12268004 4 130 13.5 14.5 14.0 0.3 183 chr3R 12267821 intron svp + chr3R 12267912 intron svp + chr3R 12268004 intron svp + chr3R_4_12265001 chr3R_12265001 RAL-373_125b 2578 chr3R 12297604 12297645 chr3R 12297729 12297761 5 113 9.5 9.5 9.5 0.5 157 chr3R 12297604 intron svp + chr3R 12297682 intron svp + chr3R 12297761 intron svp + chr3R_5_12295001 chr3R_12295001 RAL-373_125b 2579 chr3R 12299751 12299819 chr3R 12299902 12299970 20 149 18.5 18.5 18.5 1.0 219 chr3R 12299751 intron svp + chr3R 12299860 intron svp + chr3R 12299970 intron svp + chr3R_20_12295001 chr3R_12295001 RAL-373_125b 2580 chr3R 12314187 12314224 chr3R 12314339 12314388 5 156 19.0 19.0 19.0 0.2 201 chr3R 12314187 intergenic not near genes chr3R 12314288 intergenic not near genes chr3R 12314388 intergenic not near genes chr3R_5_12310001 chr3R_12310001 RAL-373_125b 2581 chr3R 12328152 12328189 chr3R 12328315 12328316 6 156 12.5 24.5 18.5 0.3 164 chr3R 12328152 intergenic CR45584 + chr3R 12328234 intergenic CR45584 + chr3R 12328316 intergenic CR45584 + chr3R_6_12325001 chr3R_12325001 RAL-373_125b 2582 chr3R 12344079 12344151 chr3R 12344206 12344278 12 127 3.5 2.5 3.0 3.0 199 chr3R 12344079 intergenic not near genes chr3R 12344178 intergenic not near genes chr3R 12344278 intergenic not near genes chr3R_12_12340001 chr3R_12340001 RAL-373_125b 2583 chr3R 12392854 12392895 chr3R 12392996 12393019 12 140 8.5 11.0 9.8 1.1 165 chr3R 12392854 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12392936 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12393019 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R_12_12390001 chr3R_12390001 RAL-373_125b 2584 chr3R 12404963 12405013 chr3R 12405234 12405285 5 272 13.5 12.5 13.0 0.4 322 chr3R 12404963 intron Cyp9f2 - chr3R 12405124 intron Cyp9f2 - chr3R 12405285 intron Cyp9f2 - chr3R_5_12405001 chr3R_12405001 RAL-373_125b 2585 chr3R 12436411 12436467 chr3R 12436542 12436574 9 131 21.5 17.0 19.2 0.4 163 chr3R 12436411 5` UTR Desat2 + chr3R 12436492 exon Desat2 + chr3R 12436574 exon Desat2 + chr3R_9_12435001 chr3R_12435001 RAL-373_125b 2586 chr3R 11912110 11912161 chr3R 12511259 12511308 4 599145 39.5 16.0 27.8 0.1 599198 chr3R 11912110 intron Cad87A - chr3R 12211709 intergenic not near genes chr3R 12511308 3` UTR Hsp70Bc + chr3R_4_12210001 chr3R_12210001 RAL-373_125b 2587 chr3R 12520677 12520710 chr3R 12520778 12520813 7 116 20.5 19.0 19.8 0.3 136 chr3R 12520677 intron Octbeta3R - chr3R 12520745 intron Octbeta3R - chr3R 12520813 intron Octbeta3R - chr3R_7_12520001 chr3R_12520001 RAL-373_125b 2588 chr3R 12522316 12522385 chr3R 12522438 12522496 8 119 16.5 17.5 17.0 0.4 180 chr3R 12522316 5` UTR Octbeta3R - chr3R 12522406 5` UTR Octbeta3R - chr3R 12522496 5` UTR Octbeta3R - chr3R_8_12520001 chr3R_12520001 RAL-373_125b 2589 chr3R 12543570 12543622 chr3R 12543700 12543746 8 136 17.5 18.0 17.8 0.4 176 chr3R 12543570 intron Octbeta3R - chr3R 12543658 intron Octbeta3R - chr3R 12543746 intron Octbeta3R - chr3R_8_12540001 chr3R_12540001 RAL-373_125b 2590 chr3R 12582698 12582709 chr3R 12582826 12582836 4 131 7.5 6.5 7.0 0.5 138 chr3R 12582698 intron Octbeta2R - chr3R 12582767 intron Octbeta2R - chr3R 12582836 intron Octbeta2R - chr3R_4_12580001 chr3R_12580001 RAL-373_125b 2591 chr3R 12602359 12602411 chr3R 12602487 12602538 9 125 15.0 16.0 15.5 0.5 179 chr3R 12602359 intergenic not near genes chr3R 12602448 intergenic not near genes chr3R 12602538 intergenic not near genes chr3R_9_12600001 chr3R_12600001 RAL-373_125b 2592 chr3R 12628573 12628630 chr3R 12628706 12628723 6 118 17.5 18.5 18.0 0.3 150 chr3R 12628573 intron Snx3 + chr3R 12628648 intron Snx3 + chr3R 12628723 intron Snx3 + chr3R_6_12625001 chr3R_12625001 RAL-373_125b 2593 chr3R 12666735 12666792 chr3R 12666901 12666934 6 169 12.5 15.0 13.8 0.4 199 chr3R 12666735 intron CG14395 + chr3R 12666834 intron CG14395 + chr3R 12666934 intron CG14395 + chr3R_6_12665001 chr3R_12665001 RAL-373_125b 2594 chr3R 12685412 12685426 chr3R 12685636 12685650 4 224 25.0 20.5 22.8 0.2 238 chr3R 12685412 intron kar - chr3R 12685531 intron kar - chr3R 12685650 intron kar - chr3R_4_12685001 chr3R_12685001 RAL-373_125b 2595 chr3R 12720665 12720722 chr3R 12720790 12720851 10 128 9.0 11.0 10.0 0.9 186 chr3R 12720665 intron Men - chr3R 12720758 intron Men - chr3R 12720851 intron Men - chr3R_10_12720001 chr3R_12720001 RAL-373_125b 2596 chr3R 12733445 12733503 chr3R 12733557 12733630 15 118 3.0 7.5 5.2 2.4 185 chr3R 12733445 intergenic not near genes chr3R 12733538 intergenic not near genes chr3R 12733630 intergenic not near genes chr3R_15_12730001 chr3R_12730001 RAL-373_125b 2597 chr3R 12735134 12735184 chr3R 12735434 12735484 7 299 5.5 5.5 5.5 1.1 350 chr3R 12735134 intergenic not near genes chr3R 12735309 intergenic not near genes chr3R 12735484 intergenic not near genes chr3R_7_12735001 chr3R_12735001 RAL-373_125b 2598 chr3R 12780227 12780294 chr3R 12780390 12780451 BS 13 158 7.5 2.0 4.8 2.2 224 chr3R 12780227 intron beat-Vc - chr3R 12780339 intron beat-Vc - chr3R 12780451 intron beat-Vc - chr3R_13_12780001 chr3R_12780001 RAL-373_125b 2599 chr3R 12781812 12781852 chr3R 12781965 12782005 7 153 12.5 16.0 14.2 0.5 193 chr3R 12781812 intron beat-Vc - chr3R 12781908 intron beat-Vc - chr3R 12782005 intron beat-Vc - chr3R_7_12780001 chr3R_12780001 RAL-373_125b 2600 chr3R 12787894 12787950 chr3R 12788027 12788083 14 132 7.5 7.0 7.2 1.7 189 chr3R 12787894 intergenic not near genes chr3R 12787988 intergenic not near genes chr3R 12788083 intergenic not near genes chr3R_14_12785001 chr3R_12785001 RAL-373_125b 2601 chr3R 12814207 12814265 chr3R 12814332 12814391 4 124 14.5 14.0 14.2 0.3 184 chr3R 12814207 intron CG31345 - chr3R 12814299 intron CG31345 - chr3R 12814391 intron CG31345 - chr3R_4_12810001 chr3R_12810001 RAL-373_125b 2602 chr3R 12866443 12866502 chr3R 12866644 12866703 7 201 21.0 17.0 19.0 0.3 260 chr3R 12866443 intergenic not near genes chr3R 12866573 intergenic not near genes chr3R 12866703 intergenic not near genes chr3R_7_12865001 chr3R_12865001 RAL-373_125b 2603 chr3R 12876921 12876980 chr3R 12877054 12877102 7 131 12.5 16.0 14.2 0.5 181 chr3R 12876921 intergenic not near genes chr3R 12877012 intergenic not near genes chr3R 12877102 intergenic not near genes chr3R_7_12875001 chr3R_12875001 RAL-373_125b 2604 chr3R 12881790 12881795 chr3R 12881923 12881928 5 133 5.5 10.5 8.0 0.6 138 chr3R 12881790 intergenic not near genes chr3R 12881859 intergenic not near genes chr3R 12881928 intergenic not near genes chr3R_5_12880001 chr3R_12880001 RAL-373_125b 2605 chr3R 12920114 12920179 chr3R 12925367 12925429 copia 15 5248 4.0 6.5 5.2 2.4 5315 chr3R 12920114 intron beat-Vb + chr3R 12922772 intron beat-Vb + chr3R 12925429 intron beat-Vb + chr3R_15_12920001 chr3R_12920001 RAL-373_125b 2606 chr3R 12972518 12972575 chr3R 12972702 12972764 14 186 16.0 16.5 16.2 0.8 246 chr3R 12972518 intron CG7381 - chr3R 12972641 intron CG7381 - chr3R 12972764 intron CG7381 - chr3R_14_12970001 chr3R_12970001 RAL-373_125b 2607 chr3R 13018107 13018163 chr3R 13018236 13018286 8 128 13.0 17.0 15.0 0.5 179 chr3R 13018107 intron CtBP + chr3R 13018196 intron CtBP + chr3R 13018286 intron CtBP + chr3R_8_13015001 chr3R_13015001 RAL-373_125b 2608 chr3R 13039762 13039779 chr3R 13039937 13039967 5 189 20.0 11.0 15.5 0.3 205 chr3R 13039762 exon CG11668 + chr3R 13039864 intron CG11668 + chr3R 13039967 exon CG11668 + chr3R_5_13035001 chr3R_13035001 RAL-373_125b 2609 chr3R 13066964 13067130 chr3R 13067101 13067246 13 125 8.5 7.5 8.0 1.4 282 chr3R 13066964 intron sim + chr3R 13067105 intron sim + chr3R 13067246 intron sim + chr3R_13_13065001 chr3R_13065001 RAL-373_125b 2610 chr3R 13075353 13075374 chr3R 13075484 13075505 6 131 5.0 11.0 8.0 0.7 152 chr3R 13075353 intron sim + chr3R 13075429 intron sim + chr3R 13075505 intron sim + chr3R_6_13075001 chr3R_13075001 RAL-373_125b 2611 chr3R 13114370 13114418 chr3R 13114498 13114547 12 133 11.5 10.5 11.0 1.0 177 chr3R 13114370 intron timeout + chr3R 13114458 intron timeout + chr3R 13114547 intron timeout + chr3R_12_13110001 chr3R_13110001 RAL-373_125b 2612 chr3R 13120723 13120784 chr3R 13120850 13120911 10 121 13.5 14.0 13.8 0.7 188 chr3R 13120723 intron timeout + chr3R 13120817 intron timeout + chr3R 13120911 intron timeout + chr3R_10_13120001 chr3R_13120001 RAL-373_125b 2613 chr3R 13135794 13135838 chr3R 13138009 13138063 pogo 11 2218 6.0 3.0 4.5 2.0 2269 chr3R 13135794 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136928 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138063 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_11_13135001 chr3R_13135001 RAL-373_125b 2614 chr3R 13143021 13143061 chr3R 13148621 13148687 mdg3 13 5615 7.5 9.0 8.2 1.4 5666 chr3R 13143021 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145854 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148687 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_13_13145001 chr3R_13145001 RAL-373_125b 2615 chr3R 13165790 13165815 chr3R 13165923 13165948 4 133 20.0 17.5 18.8 0.2 158 chr3R 13165790 intergenic not near genes chr3R 13165869 intergenic not near genes chr3R 13165948 intergenic not near genes chr3R_4_13165001 chr3R_13165001 RAL-373_125b 2616 chr3R 13171934 13171983 chr3R 13172794 13172843 5 860 42.0 24.0 33.0 0.1 909 chr3R 13171934 intergenic not near genes chr3R 13172388 intergenic not near genes chr3R 13172843 intergenic not near genes chr3R_5_13170001 chr3R_13170001 RAL-373_125b 2617 chr3R 13173395 13173475 chr3R 13173527 13173536 15 117 12.0 9.5 10.8 1.3 141 chr3R 13173395 intergenic not near genes chr3R 13173466 intergenic not near genes chr3R 13173536 intergenic not near genes chr3R_15_13170001 chr3R_13170001 RAL-373_125b 2618 chr3R 13195907 13195940 chr3R 13196052 13196068 9 141 16.5 3.5 10.0 0.8 161 chr3R 13195907 intergenic not near genes chr3R 13195988 intergenic not near genes chr3R 13196068 intergenic not near genes chr3R_9_13195001 chr3R_13195001 RAL-373_125b 2619 chr3R 13195942 13195984 chr3R 13196049 13196119 13 134 8.5 3.5 6.0 1.9 177 chr3R 13195942 intergenic not near genes chr3R 13196030 intergenic not near genes chr3R 13196119 intergenic not near genes chr3R_13_13195001 chr3R_13195001 RAL-373_125b 2620 chr3R 13248609 13248617 chr3R 13248758 13248766 5 148 28.0 10.5 19.2 0.2 157 chr3R 13248609 intron Ace - chr3R 13248688 intron Ace - chr3R 13248766 intron Ace - chr3R_5_13245001 chr3R_13245001 RAL-373_125b 2621 chr3R 13248618 13248677 chr3R 13248755 13248826 15 148 19.0 10.5 14.8 0.9 208 chr3R 13248618 intron Ace - chr3R 13248722 intron Ace - chr3R 13248826 intron Ace - chr3R_15_13245001 chr3R_13245001 RAL-373_125b 2622 chr3R 13249563 13249593 chr3R 13249727 13249757 5 164 7.5 2.0 4.8 0.9 194 chr3R 13249563 intron Ace - chr3R 13249660 intron Ace - chr3R 13249757 intron Ace - chr3R_5_13245001 chr3R_13245001 RAL-373_125b 2623 chr3R 13260682 13260747 chr3R 13260857 13260928 17 177 13.5 14.0 13.8 1.1 246 chr3R 13260682 intron CG11686 + chr3R 13260805 intron CG11686 + chr3R 13260928 intron CG11686 + chr3R_17_13260001 chr3R_13260001 RAL-373_125b 2624 chr3R 13272017 13272071 chr3R 13272152 13272193 9 134 15.5 16.0 15.8 0.5 176 chr3R 13272017 intergenic CG8449 - chr3R 13272105 intergenic CG8449 - chr3R 13272193 intergenic CG8449 - chr3R_9_13270001 chr3R_13270001 RAL-373_125b 2625 chr3R 13274172 13274238 chr3R 13274296 13274340 13 124 3.0 4.5 3.8 2.7 168 chr3R 13274172 intergenic not near genes chr3R 13274256 intergenic not near genes chr3R 13274340 intergenic not near genes chr3R_13_13270001 chr3R_13270001 RAL-373_125b 2626 chr3R 13293996 13294038 chr3R 13294174 13294252 8 210 9.5 10.0 9.8 0.7 256 chr3R 13293996 intergenic not near genes chr3R 13294124 intergenic not near genes chr3R 13294252 intergenic CG8773 + chr3R_8_13290001 chr3R_13290001 RAL-373_125b 2627 chr3R 13306078 13306150 chr3R 13306515 13306587 12 434 14.5 9.5 12.0 0.9 509 chr3R 13306078 intron CG32473 + chr3R 13306332 intron CG32473 + chr3R 13306587 intron CG32473 + chr3R_12_13305001 chr3R_13305001 RAL-373_125b 2628 chr3R 13323920 13323985 chr3R 13324075 13324091 7 146 14.5 10.0 12.2 0.5 171 chr3R 13323920 intergenic not near genes chr3R 13324006 intergenic not near genes chr3R 13324091 intergenic not near genes chr3R_7_13320001 chr3R_13320001 RAL-373_125b 2629 chr3R 13326900 13326943 chr3R 13327038 13327088 9 142 19.0 15.5 17.2 0.5 188 chr3R 13326900 intergenic not near genes chr3R 13326994 intergenic not near genes chr3R 13327088 intergenic not near genes chr3R_9_13325001 chr3R_13325001 RAL-373_125b 2630 chr3R 13336624 13336684 chr3R 13336740 13336765 8 114 15.0 16.5 15.8 0.5 141 chr3R 13336624 intergenic not near genes chr3R 13336694 intergenic not near genes chr3R 13336765 intergenic not near genes chr3R_8_13335001 chr3R_13335001 RAL-373_125b 2631 chr3R 13356056 13356112 chr3R 13356182 13356239 6 130 9.5 11.0 10.2 0.5 183 chr3R 13356056 intergenic not near genes chr3R 13356148 intergenic not near genes chr3R 13356239 intergenic not near genes chr3R_6_13355001 chr3R_13355001 RAL-373_125b 2632 chr3R 13358194 13358239 chr3R 13358509 13358568 11 327 20.5 19.5 20.0 0.5 374 chr3R 13358194 intergenic not near genes chr3R 13358381 intergenic not near genes chr3R 13358568 intergenic not near genes chr3R_11_13355001 chr3R_13355001 RAL-373_125b 2633 chr3R 13391593 13391651 chr3R 13391721 13391779 7 128 13.0 19.0 16.0 0.4 186 chr3R 13391593 intron CCHa2 - chr3R 13391686 intron CCHa2 - chr3R 13391779 intron CCHa2 - chr3R_7_13390001 chr3R_13390001 RAL-373_125b 2634 chr3R 13439549 13439583 chr3R 13439671 13439716 5 130 5.5 6.5 6.0 0.7 167 chr3R 13439549 intergenic CR42756 - chr3R 13439632 intergenic CR42756 - chr3R 13439716 intergenic not near genes chr3R_5_13435001 chr3R_13435001 RAL-373_125b 2635 chr3R 13501183 13501263 chr3R 13501326 13501399 4 136 13.0 9.0 11.0 0.3 216 chr3R 13501183 intergenic not near genes chr3R 13501291 intergenic not near genes chr3R 13501399 intergenic not near genes chr3R_4_13500001 chr3R_13500001 RAL-373_125b 2636 chr3R 13557994 13558037 chr3R 13558126 13558161 9 131 18.5 21.5 20.0 0.4 167 chr3R 13557994 intergenic not near genes chr3R 13558078 intergenic not near genes chr3R 13558161 intergenic not near genes chr3R_9_13555001 chr3R_13555001 RAL-373_125b 2637 chr3R 13571345 13571365 chr3R 13571457 13571515 4 127 16.5 10.5 13.5 0.3 170 chr3R 13571345 intergenic not near genes chr3R 13571430 intergenic not near genes chr3R 13571515 intergenic not near genes chr3R_4_13570001 chr3R_13570001 RAL-373_125b 2638 chr3R 13577454 13577508 chr3R 13577626 13577680 7 171 11.5 14.0 12.8 0.5 226 chr3R 13577454 intergenic not near genes chr3R 13577567 intergenic not near genes chr3R 13577680 intergenic not near genes chr3R_7_13575001 chr3R_13575001 RAL-373_125b 2639 chr3R 13580804 13580829 chr3R 13580930 13580950 8 127 7.5 8.0 7.8 0.9 146 chr3R 13580804 intergenic not near genes chr3R 13580877 intergenic not near genes chr3R 13580950 intergenic not near genes chr3R_8_13580001 chr3R_13580001 RAL-373_125b 2640 chr3R 13599175 13599240 chr3R 13599331 13599396 13 159 3.5 4.5 4.0 2.6 221 chr3R 13599175 intergenic not near genes chr3R 13599286 intergenic not near genes chr3R 13599396 intergenic not near genes chr3R_13_13595001 chr3R_13595001 RAL-373_125b 2641 chr3R 13602128 13602191 chr3R 13602267 13602318 6 128 12.5 14.5 13.5 0.4 190 chr3R 13602128 intergenic not near genes chr3R 13602223 intergenic not near genes chr3R 13602318 intergenic not near genes chr3R_6_13600001 chr3R_13600001 RAL-373_125b 2642 chr3R 13603009 13603075 chr3R 13603149 13603216 15 140 5.0 1.5 3.2 3.6 207 chr3R 13603009 intergenic not near genes chr3R 13603112 intergenic not near genes chr3R 13603216 intergenic not near genes chr3R_15_13600001 chr3R_13600001 RAL-373_125b 2643 chr3R 13619419 13619463 chr3R 13619567 13619583 6 142 25.0 19.0 22.0 0.3 164 chr3R 13619419 intergenic not near genes chr3R 13619501 intergenic not near genes chr3R 13619583 intergenic not near genes chr3R_6_13615001 chr3R_13615001 RAL-373_125b 2644 chr3R 13625649 13625716 chr3R 13625780 13625847 10 130 6.5 4.5 5.5 1.5 198 chr3R 13625649 intergenic not near genes chr3R 13625748 intergenic not near genes chr3R 13625847 intergenic not near genes chr3R_10_13625001 chr3R_13625001 RAL-373_125b 2645 chr3R 13659695 13659841 chr3R 13659829 13659979 6 145 0.0 0.0 0.0 6.0 284 chr3R 13659695 intron Hrb87F - chr3R 13659837 intron Hrb87F - chr3R 13659979 intron Hrb87F - chr3R_6_13655001 chr3R_13655001 RAL-373_125b 2646 chr3R 13714497 13714535 chr3R 13714686 13714708 6 186 11.5 11.0 11.2 0.5 211 chr3R 13714497 intergenic CR34044 - chr3R 13714602 intergenic CR34044 - chr3R 13714708 intergenic CG34383 + chr3R_6_13710001 chr3R_13710001 RAL-373_125b 2647 chr3R 13736041 13736067 chr3R 13736145 13736207 7 126 16.5 13.0 14.8 0.4 166 chr3R 13736041 intron CG34383 + chr3R 13736124 intron CG34383 + chr3R 13736207 intron CG34383 + chr3R_7_13735001 chr3R_13735001 RAL-373_125b 2648 chr3R 13745393 13745441 chr3R 13745556 13745603 5 165 2.5 1.5 2.0 1.7 210 chr3R 13745393 intron CG34383 + chr3R 13745498 intron CG34383 + chr3R 13745603 intron CG34383 + chr3R_5_13745001 chr3R_13745001 RAL-373_125b 2649 chr3R 13765990 13766041 chr3R 13766333 13766369 4 335 17.5 15.5 16.5 0.2 379 chr3R 13765990 exon CG9312 + chr3R 13766180 exon CG9312 + chr3R 13766369 exon CG9312 + chr3R_4_13765001 chr3R_13765001 RAL-373_125b 2650 chr3R 13830600 13830637 chr3R 13830731 13830768 7 134 12.5 14.0 13.2 0.5 168 chr3R 13830600 intergenic not near genes chr3R 13830684 intergenic not near genes chr3R 13830768 intergenic not near genes chr3R_7_13830001 chr3R_13830001 RAL-373_125b 2651 chr3R 13880498 13880552 chr3R 13880667 13880719 12 163 12.0 12.0 12.0 0.9 221 chr3R 13880498 intergenic not near genes chr3R 13880608 intergenic not near genes chr3R 13880719 intergenic not near genes chr3R_12_13880001 chr3R_13880001 RAL-373_125b 2652 chr3R 13974065 13974116 chr3R 13974178 13974254 5 133 9.5 12.5 11.0 0.4 189 chr3R 13974065 intron,intron rdx -,CR43460 + chr3R 13974160 intron,5` UTR rdx -,CR43460 + chr3R 13974254 intron,5` UTR rdx -,CR43460 + chr3R_5_13970001 chr3R_13970001 RAL-373_125b 2653 chr3R 13975338 13975352 chr3R 13975463 13975477 4 128 26.0 22.0 24.0 0.2 139 chr3R 13975338 intron rdx - chr3R 13975408 intron rdx - chr3R 13975477 intron rdx - chr3R_4_13975001 chr3R_13975001 RAL-373_125b 2654 chr3R 13975365 13975398 chr3R 13975458 13975528 8 125 20.5 20.5 20.5 0.4 163 chr3R 13975365 intron rdx - chr3R 13975446 intron rdx - chr3R 13975528 intron rdx - chr3R_8_13975001 chr3R_13975001 RAL-373_125b 2655 chr3R 14021605 14021678 chr3R 14023472 14023538 S-element 15 1860 5.5 6.5 6.0 2.1 1933 chr3R 14021605 intron rdx - chr3R 14022572 intron rdx - chr3R 14023538 intron rdx - chr3R_15_14020001 chr3R_14020001 RAL-373_125b 2656 chr3R 14058076 14058147 chr3R 14058246 14058313 8 168 9.5 4.0 6.8 1.0 237 chr3R 14058076 5` UTR foxo + chr3R 14058194 intron foxo + chr3R 14058313 intron foxo + chr3R_8_14055001 chr3R_14055001 RAL-373_125b 2657 chr3R 14062818 14062865 chr3R 14062931 14062992 6 123 12.0 15.0 13.5 0.4 174 chr3R 14062818 intron foxo + chr3R 14062905 intron foxo + chr3R 14062992 intron foxo + chr3R_6_14060001 chr3R_14060001 RAL-373_125b 2658 chr3R 14067095 14067139 chr3R 14067224 14067268 8 129 9.5 12.0 10.8 0.7 173 chr3R 14067095 exon foxo + chr3R 14067182 intron foxo + chr3R 14067268 intron foxo + chr3R_8_14065001 chr3R_14065001 RAL-373_125b 2659 chr3R 14083367 14083393 chr3R 14083509 14083544 4 148 18.0 8.0 13.0 0.3 177 chr3R 14083367 intron foxo + chr3R 14083456 intron foxo + chr3R 14083544 intron foxo + chr3R_4_14080001 chr3R_14080001 RAL-373_125b 2660 chr3R 14089536 14089541 chr3R 14089675 14089680 4 139 3.0 1.5 2.2 1.2 144 chr3R 14089536 5` UTR Npc2b + chr3R 14089608 intron Npc2b + chr3R 14089680 intron Npc2b + chr3R_4_14085001 chr3R_14085001 RAL-373_125b 2661 chr3R 14105012 14105063 chr3R 14105162 14105213 7 146 20.5 21.5 21.0 0.3 201 chr3R 14105012 3` UTR CG12402 - chr3R 14105112 3` UTR CG12402 - chr3R 14105213 3` UTR CG12402 - chr3R_7_14105001 chr3R_14105001 RAL-373_125b 2662 chr3R 14109037 14109107 chr3R 14109168 14109232 9 130 6.5 9.5 8.0 1.0 195 chr3R 14109037 intergenic CR44237 -,Or88a + chr3R 14109134 intergenic CR44237 -,Or88a + chr3R 14109232 intergenic CR44237 -,Or88a + chr3R_9_14105001 chr3R_14105001 RAL-373_125b 2663 chr3R 14135591 14135826 chr3R 14135744 14135973 6 140 10.0 14.5 12.2 0.5 382 chr3R 14135591 intergenic not near genes chr3R 14135782 intergenic not near genes chr3R 14135973 intergenic not near genes chr3R_6_14135001 chr3R_14135001 RAL-373_125b 2664 chr3R 14180776 14180831 chr3R 14185576 14185646 F-element 9 4810 6.0 7.5 6.8 1.2 4870 chr3R 14180776 intron Dop1R1 - chr3R 14183211 intron Dop1R1 - chr3R 14185646 intron Dop1R1 - chr3R_9_14180001 chr3R_14180001 RAL-373_125b 2665 chr3R 14194391 14194450 chr3R 14203590 14203624 roo 15 9190 6.5 3.0 4.8 2.6 9233 chr3R 14194391 intron Dop1R1 - chr3R 14199008 intron Dop1R1 - chr3R 14203624 intron Dop1R1 - chr3R_15_14195001 chr3R_14195001 RAL-373_125b 2666 chr3R 14236901 14236925 chr3R 14244449 14244449 Idefix 4 7541 8.5 5.0 6.8 0.5 7548 chr3R 14236901 exon CG43291 - chr3R 14240675 intron CG43291 - chr3R 14244449 intron CG43291 - chr3R_4_14240001 chr3R_14240001 RAL-373_125b 2667 chr3R 14246362 14246417 chr3R 14247896 14247956 jockey 26 1533 6.0 9.0 7.5 3.1 1594 chr3R 14246362 intergenic not near genes chr3R 14247159 intergenic not near genes chr3R 14247956 intergenic not near genes chr3R_26_14245001 chr3R_14245001 RAL-373_125b 2668 chr3R 14248685 14248728 chr3R 14248813 14248856 8 126 10.5 6.5 8.5 0.8 171 chr3R 14248685 intergenic not near genes chr3R 14248770 intergenic not near genes chr3R 14248856 intergenic not near genes chr3R_8_14245001 chr3R_14245001 RAL-373_125b 2669 chr3R 14253665 14253707 chr3R 14253783 14253836 9 127 7.0 5.5 6.2 1.2 171 chr3R 14253665 intron Aats-met - chr3R 14253750 intron Aats-met - chr3R 14253836 intron Aats-met - chr3R_9_14250001 chr3R_14250001 RAL-373_125b 2670 chr3R 14293661 14293723 chr3R 14293808 14293870 6 147 14.5 14.0 14.2 0.4 209 chr3R 14293661 intron CG12207 + chr3R 14293766 intron CG12207 + chr3R 14293870 intron CG12207 + chr3R_6_14290001 chr3R_14290001 RAL-373_125b 2671 chr3R 14331342 14331397 chr3R 14331486 14331536 5 138 13.0 12.0 12.5 0.4 194 chr3R 14331342 intron NK7.1 - chr3R 14331439 intron NK7.1 - chr3R 14331536 intron NK7.1 - chr3R_5_14330001 chr3R_14330001 RAL-373_125b 2672 chr3R 14339571 14339647 chr3R 14339765 14339843 8 195 16.5 15.0 15.8 0.5 272 chr3R 14339571 intron NK7.1 - chr3R 14339707 intron NK7.1 - chr3R 14339843 intron NK7.1 - chr3R_8_14335001 chr3R_14335001 RAL-373_125b 2673 chr3R 14364043 14364092 chr3R 14364159 14364212 8 119 13.0 14.0 13.5 0.6 169 chr3R 14364043 intron NK7.1 - chr3R 14364128 intron NK7.1 - chr3R 14364212 intron NK7.1 - chr3R_8_14360001 chr3R_14360001 RAL-373_125b 2674 chr3R 14366155 14366227 chr3R 14366283 14366325 11 122 23.0 22.5 22.8 0.5 170 chr3R 14366155 intron NK7.1 - chr3R 14366240 intron NK7.1 - chr3R 14366325 intron NK7.1 - chr3R_11_14365001 chr3R_14365001 RAL-373_125b 2675 chr3R 14440689 14440747 chr3R 14440815 14440867 4 124 0.5 3.5 2.0 1.3 178 chr3R 14440689 intron cv-c - chr3R 14440778 intron cv-c - chr3R 14440867 intron cv-c - chr3R_4_14440001 chr3R_14440001 RAL-373_125b 2676 chr3R 14469479 14469532 chr3R 14469614 14469659 6 135 17.0 11.0 14.0 0.4 180 chr3R 14469479 intron cv-c - chr3R 14469569 intron cv-c - chr3R 14469659 intron cv-c - chr3R_6_14465001 chr3R_14465001 RAL-373_125b 2677 chr3R 14482352 14482405 chr3R 14482478 14482537 5 131 19.5 16.0 17.8 0.3 185 chr3R 14482352 intergenic not near genes chr3R 14482444 intergenic not near genes chr3R 14482537 intergenic not near genes chr3R_5_14480001 chr3R_14480001 RAL-373_125b 2678 chr3R 14514444 14514494 chr3R 14514579 14514629 5 135 18.0 19.0 18.5 0.3 185 chr3R 14514444 3` UTR Pde6 - chr3R 14514536 3` UTR Pde6 - chr3R 14514629 3` UTR Pde6 - chr3R_5_14510001 chr3R_14510001 RAL-373_125b 2679 chr3R 14527361 14527415 chr3R 14527478 14527541 19 122 9.5 11.5 10.5 1.7 180 chr3R 14527361 intron Pde6 - chr3R 14527451 intron Pde6 - chr3R 14527541 intron Pde6 - chr3R_19_14525001 chr3R_14525001 RAL-373_125b 2680 chr3R 14533517 14533585 chr3R 14533646 14533723 4 134 0.0 3.0 1.5 1.6 206 chr3R 14533517 intron Pde6 - chr3R 14533620 intron Pde6 - chr3R 14533723 intron Pde6 - chr3R_4_14530001 chr3R_14530001 RAL-373_125b 2681 chr3R 14556546 14556594 chr3R 14556679 14556727 4 132 16.5 12.0 14.2 0.3 181 chr3R 14556546 intron Pde6 - chr3R 14556636 intron Pde6 - chr3R 14556727 intron Pde6 - chr3R_4_14555001 chr3R_14555001 RAL-373_125b 2682 chr3R 14577924 14577985 chr3R 14578085 14578141 14 164 23.5 20.5 22.0 0.6 217 chr3R 14577924 intron stumps + chr3R 14578032 intron stumps + chr3R 14578141 intron stumps + chr3R_14_14575001 chr3R_14575001 RAL-373_125b 2683 chr3R 14579313 14579362 chr3R 14579452 14579491 7 132 18.0 22.5 20.2 0.3 178 chr3R 14579313 intron stumps + chr3R 14579402 intron stumps + chr3R 14579491 intron stumps + chr3R_7_14575001 chr3R_14575001 RAL-373_125b 2684 chr3R 14608422 14608476 chr3R 14608564 14608616 17 141 3.0 4.0 3.5 3.8 194 chr3R 14608422 intergenic stumps + chr3R 14608519 intergenic stumps + chr3R 14608616 intergenic not near genes chr3R_17_14605001 chr3R_14605001 RAL-373_125b 2685 chr3R 14631220 14631267 chr3R 14631343 14631395 4 127 7.0 8.0 7.5 0.5 175 chr3R 14631220 intron,intron CG7886 -,Cad88C + chr3R 14631308 intron,intron CG7886 -,Cad88C + chr3R 14631395 intron,intron CG7886 -,Cad88C + chr3R_4_14630001 chr3R_14630001 RAL-373_125b 2686 chr3R 14662264 14662333 chr3R 14662395 14662462 18 128 4.0 5.5 4.8 3.1 198 chr3R 14662264 exon Rad17 - chr3R 14662363 intron Rad17 - chr3R 14662462 exon Rad17 - chr3R_18_14660001 chr3R_14660001 RAL-373_125b 2687 chr3R 14695777 14695823 chr3R 14696072 14696118 6 293 14.0 15.5 14.8 0.4 341 chr3R 14695777 intron Meltrin - chr3R 14695948 intron Meltrin - chr3R 14696118 intron Meltrin - chr3R_6_14695001 chr3R_14695001 RAL-373_125b 2688 chr3R 14704351 14704398 chr3R 14704478 14704515 9 125 12.5 15.5 14.0 0.6 164 chr3R 14704351 intron kibra - chr3R 14704433 intron kibra - chr3R 14704515 intron kibra - chr3R_9_14700001 chr3R_14700001 RAL-373_125b 2689 chr3R 14759627 14759671 chr3R 14759754 14759798 8 126 11.0 11.0 11.0 0.7 171 chr3R 14759627 intron jvl + chr3R 14759712 intron jvl + chr3R 14759798 intron jvl + chr3R_8_14755001 chr3R_14755001 RAL-373_125b 2690 chr3R 14764521 14764597 chr3R 14764669 14764732 5 135 6.0 2.5 4.2 1.0 211 chr3R 14764521 intron jvl + chr3R 14764626 intron jvl + chr3R 14764732 intron jvl + chr3R_5_14760001 chr3R_14760001 RAL-373_125b 2691 chr3R 14775970 14776030 chr3R 14776102 14776160 8 138 11.5 13.0 12.2 0.6 190 chr3R 14775970 intron jvl + chr3R 14776065 intron jvl + chr3R 14776160 intron jvl + chr3R_8_14775001 chr3R_14775001 RAL-373_125b 2692 chr3R 14824497 14824553 chr3R 14824641 14824689 6 136 4.0 3.5 3.8 1.2 192 chr3R 14824497 intron btsz - chr3R 14824593 intron btsz - chr3R 14824689 intron btsz - chr3R_6_14820001 chr3R_14820001 RAL-373_125b 2693 chr3R 14842525 14842583 chr3R 14842654 14842695 7 128 9.0 12.5 10.8 0.6 170 chr3R 14842525 intron btsz - chr3R 14842610 intron btsz - chr3R 14842695 intron btsz - chr3R_7_14840001 chr3R_14840001 RAL-373_125b 2694 chr3R 14934421 14934476 chr3R 14934813 14934891 10 407 12.5 16.0 14.2 0.7 470 chr3R 14934421 intergenic not near genes chr3R 14934656 intergenic not near genes chr3R 14934891 intergenic not near genes chr3R_10_14930001 chr3R_14930001 RAL-373_125b 2695 chr3R 14951932 14951978 chr3R 14952091 14952137 6 157 12.0 15.0 13.5 0.4 205 chr3R 14951932 intergenic not near genes chr3R 14952034 intergenic not near genes chr3R 14952137 intergenic not near genes chr3R_6_14950001 chr3R_14950001 RAL-373_125b 2696 chr3R 15007656 15007695 chr3R 15007782 15007822 4 125 14.5 13.0 13.8 0.3 166 chr3R 15007656 intergenic not near genes chr3R 15007739 intergenic not near genes chr3R 15007822 intergenic not near genes chr3R_4_15005001 chr3R_15005001 RAL-373_125b 2697 chr3R 15041350 15041445 chr3R 15045184 15045263 Doc 11 3828 1.0 2.0 1.5 4.4 3913 chr3R 15041350 intergenic not near genes chr3R 15043306 intergenic not near genes chr3R 15045263 intergenic not near genes chr3R_11_15040001 chr3R_15040001 RAL-373_125b 2698 chr3R 15049417 15049479 chr3R 15049593 15049650 9 174 14.0 13.5 13.8 0.6 233 chr3R 15049417 intergenic not near genes chr3R 15049534 intergenic not near genes chr3R 15049650 intergenic not near genes chr3R_9_15045001 chr3R_15045001 RAL-373_125b 2699 chr3R 15059255 15059477 chr3R 15059506 15059608 BS 6 224 1.0 1.5 1.2 2.7 353 chr3R 15059255 intron dpr9 - chr3R 15059432 intron dpr9 - chr3R 15059608 intron dpr9 - chr3R_6_15055001 chr3R_15055001 RAL-373_125b 2700 chr3R 15071147 15071195 chr3R 15071322 15071370 7 173 18.0 17.5 17.8 0.4 223 chr3R 15071147 intron dpr9 - chr3R 15071258 intron dpr9 - chr3R 15071370 intron dpr9 - chr3R_7_15070001 chr3R_15070001 RAL-373_125b 2701 chr3R 15076605 15076654 chr3R 15076739 15076781 7 128 13.0 11.5 12.2 0.5 176 chr3R 15076605 intron dpr9 - chr3R 15076693 intron dpr9 - chr3R 15076781 intron dpr9 - chr3R_7_15075001 chr3R_15075001 RAL-373_125b 2702 chr3R 15079772 15079837 chr3R 15080063 15080117 pogo 8 288 2.5 0.0 1.2 3.6 345 chr3R 15079772 3` UTR CG6966 - chr3R 15079944 3` UTR CG6966 - chr3R 15080117 3` UTR CG6966 - chr3R_8_15075001 chr3R_15075001 RAL-373_125b 2703 chr3R 15087381 15087433 chr3R 15087512 15087548 4 125 14.5 11.5 13.0 0.3 167 chr3R 15087381 intron CG6966 - chr3R 15087464 intron CG6966 - chr3R 15087548 intron CG6966 - chr3R_4_15085001 chr3R_15085001 RAL-373_125b 2704 chr3R 15088049 15088100 chr3R 15088197 15088247 5 148 21.0 16.0 18.5 0.3 198 chr3R 15088049 intron CG6966 - chr3R 15088148 intron CG6966 - chr3R 15088247 intron CG6966 - chr3R_5_15085001 chr3R_15085001 RAL-373_125b 2705 chr3R 15102452 15102504 chr3R 15109761 15109812 412 10 7309 7.0 7.0 7.0 1.2 7360 chr3R 15102452 intron CG42788 - chr3R 15106132 intron CG42788 - chr3R 15109812 intron CG42788 - chr3R_10_15105001 chr3R_15105001 RAL-373_125b 2706 chr3R 15129944 15129991 chr3R 15130062 15130101 18 125 4.5 8.0 6.2 2.5 157 chr3R 15129944 intron CG42788 - chr3R 15130022 intron CG42788 - chr3R 15130101 intron CG42788 - chr3R_18_15130001 chr3R_15130001 RAL-373_125b 2707 chr3R 15132019 15132069 chr3R 15135129 15135179 Juan 17 3108 8.5 6.0 7.2 2.1 3160 chr3R 15132019 intergenic CG42788 - chr3R 15133599 intergenic not near genes chr3R 15135179 3` UTR CG6912 - chr3R_17_15130001 chr3R_15130001 RAL-373_125b 2708 chr3R 15162505 15162559 chr3R 15167315 15167377 F-element 5 4813 4.0 4.5 4.2 1.0 4872 chr3R 15162505 intron Gyc88E + chr3R 15164941 intron Gyc88E + chr3R 15167377 intron Gyc88E + chr3R_5_15160001 chr3R_15160001 RAL-373_125b 2709 chr3R 15180860 15180881 chr3R 15180996 15181004 4 132 21.0 16.0 18.5 0.2 144 chr3R 15180860 intron Gyc88E + chr3R 15180932 intron Gyc88E + chr3R 15181004 intron Gyc88E + chr3R_4_15180001 chr3R_15180001 RAL-373_125b 2710 chr3R 15184492 15184569 chr3R 15184624 15184690 13 123 15.0 16.0 15.5 0.8 198 chr3R 15184492 intron Gyc88E + chr3R 15184591 intron Gyc88E + chr3R 15184690 intron Gyc88E + chr3R_13_15180001 chr3R_15180001 RAL-373_125b 2711 chr3R 15286985 15286988 chr3R 21907534 21907535 11 6620548 19.5 23.5 21.5 0.5 6620550 chr3R 15286985 intron Tm1 + chr3R 18597260 intron,exon qin +,CG14304 - chr3R 21907535 intergenic CG6678 + chr3R_11_18595001 chr3R_18595001 RAL-373_125b 2712 chr3R 15416209 15416268 chr3R 15416339 15416398 8 129 15.5 14.0 14.8 0.5 189 chr3R 15416209 3` UTR Atx2 + chr3R 15416304 3` UTR Atx2 + chr3R 15416398 3` UTR Atx2 + chr3R_8_15415001 chr3R_15415001 RAL-373_125b 2713 chr3R 15450875 15450902 chr3R 15451022 15451032 5 136 18.0 15.0 16.5 0.3 157 chr3R 15450875 intron AdamTS-A - chr3R 15450954 intron AdamTS-A - chr3R 15451032 intron AdamTS-A - chr3R_5_15450001 chr3R_15450001 RAL-373_125b 2714 chr3R 15452239 15452305 chr3R 15452361 15452418 10 122 12.5 14.0 13.2 0.7 179 chr3R 15452239 intron AdamTS-A - chr3R 15452328 intron AdamTS-A - chr3R 15452418 intron AdamTS-A - chr3R_10_15450001 chr3R_15450001 RAL-373_125b 2715 chr3R 15499384 15499441 chr3R 15499522 15499579 10 135 18.5 13.5 16.0 0.6 195 chr3R 15499384 intergenic not near genes chr3R 15499482 intergenic not near genes chr3R 15499579 intergenic not near genes chr3R_10_15495001 chr3R_15495001 RAL-373_125b 2716 chr3R 15517574 15517629 chr3R 15517707 15517757 9 127 13.0 14.5 13.8 0.6 183 chr3R 15517574 intergenic not near genes chr3R 15517666 intergenic not near genes chr3R 15517757 intergenic not near genes chr3R_9_15515001 chr3R_15515001 RAL-373_125b 2717 chr3R 15526691 15526727 chr3R 15526830 15526868 5 136 8.5 11.5 10.0 0.5 177 chr3R 15526691 intergenic not near genes chr3R 15526780 intergenic not near genes chr3R 15526868 intergenic not near genes chr3R_5_15525001 chr3R_15525001 RAL-373_125b 2718 chr3R 15557379 15557439 chr3R 15557615 15557665 11 233 13.5 13.5 13.5 0.8 286 chr3R 15557379 intergenic not near genes chr3R 15557522 intergenic not near genes chr3R 15557665 intergenic not near genes chr3R_11_15555001 chr3R_15555001 RAL-373_125b 2719 chr3R 15585874 15585919 chr3R 15585998 15586021 15 117 12.5 12.5 12.5 1.1 147 chr3R 15585874 intergenic not near genes chr3R 15585948 intergenic not near genes chr3R 15586021 intergenic not near genes chr3R_15_15585001 chr3R_15585001 RAL-373_125b 2720 chr3R 15601125 15601185 chr3R 15608696 15608757 412 23 7571 12.0 4.5 8.2 2.5 7632 chr3R 15601125 intergenic not near genes chr3R 15604941 intergenic not near genes chr3R 15608757 intergenic not near genes chr3R_23_15600001 chr3R_15600001 RAL-373_125b 2721 chr3R 15618694 15618744 chr3R 15626203 15626268 blood 13 7521 13.5 5.0 9.2 1.3 7574 chr3R 15618694 intergenic not near genes chr3R 15622481 intergenic not near genes chr3R 15626268 intergenic not near genes chr3R_13_15620001 chr3R_15620001 RAL-373_125b 2722 chr3R 15639676 15639704 chr3R 15639793 15639831 5 125 14.5 14.5 14.5 0.3 155 chr3R 15639676 intergenic not near genes chr3R 15639754 intergenic not near genes chr3R 15639831 intergenic not near genes chr3R_5_15635001 chr3R_15635001 RAL-373_125b 2723 chr3R 15646747 15646798 chr3R 15646873 15646931 7 132 15.0 11.0 13.0 0.5 184 chr3R 15646747 intergenic not near genes chr3R 15646839 intergenic not near genes chr3R 15646931 intergenic not near genes chr3R_7_15645001 chr3R_15645001 RAL-373_125b 2724 chr3R 15691142 15691313 chr3R 15691286 15691423 5 136 9.5 10.5 10.0 0.5 281 chr3R 15691142 intergenic not near genes chr3R 15691282 intergenic not near genes chr3R 15691423 intergenic not near genes chr3R_5_15690001 chr3R_15690001 RAL-373_125b 2725 chr3R 15711248 15711283 chr3R 15711367 15711407 6 124 10.5 9.0 9.8 0.6 159 chr3R 15711248 intergenic not near genes chr3R 15711328 intergenic not near genes chr3R 15711407 intergenic not near genes chr3R_6_15710001 chr3R_15710001 RAL-373_125b 2726 chr3R 15734144 15734167 chr3R 15734285 15734293 5 133 12.0 12.0 12.0 0.4 149 chr3R 15734144 intergenic not near genes chr3R 15734218 intergenic not near genes chr3R 15734293 intergenic not near genes chr3R_5_15730001 chr3R_15730001 RAL-373_125b 2727 chr3R 15735204 15735236 chr3R 15739962 15740006 F-element 10 4768 4.5 4.5 4.5 1.8 4802 chr3R 15735204 intergenic not near genes chr3R 15737605 intergenic not near genes chr3R 15740006 intergenic not near genes chr3R_10_15735001 chr3R_15735001 RAL-373_125b 2728 chr3R 15742945 15742987 chr3R 15743217 15743262 4 274 15.0 16.5 15.8 0.2 317 chr3R 15742945 intergenic not near genes chr3R 15743104 intergenic not near genes chr3R 15743262 intergenic not near genes chr3R_4_15740001 chr3R_15740001 RAL-373_125b 2729 chr3R 15777646 15777709 chr3R 15777830 15777893 5 184 10.0 9.5 9.8 0.5 247 chr3R 15777646 intergenic CG4525 + chr3R 15777770 intergenic CG4525 + chr3R 15777893 intergenic CG4525 + chr3R_5_15775001 chr3R_15775001 RAL-373_125b 2730 chr3R 15790087 15790246 chr3R 15790245 15790407 38 165 21.5 22.0 21.8 1.7 320 chr3R 15790087 exon c(3)G - chr3R 15790247 exon c(3)G - chr3R 15790407 exon c(3)G - chr3R_38_15790001 chr3R_15790001 RAL-373_125b 2731 chr3R 15790258 15790400 chr3R 15790574 15790641 35 300 17.5 36.0 26.8 1.3 383 chr3R 15790258 exon c(3)G - chr3R 15790450 exon c(3)G - chr3R 15790641 exon c(3)G - chr3R_35_15790001 chr3R_15790001 RAL-373_125b 2732 chr3R 15790795 15790870 chr3R 15790961 15791025 52 164 40.5 49.0 44.8 1.1 230 chr3R 15790795 exon c(3)G - chr3R 15790910 intron c(3)G - chr3R 15791025 exon c(3)G - chr3R_52_15790001 chr3R_15790001 RAL-373_125b 2733 chr3R 15843373 15843409 chr3R 15847958 15848001 5 4589 31.5 28.5 30.0 0.2 4628 chr3R 15843373 exon spn-E + chr3R 15845687 intron cv-d - chr3R 15848001 intron,exon cv-d -,CG4546 + chr3R_5_15845001 chr3R_15845001 RAL-373_125b 2734 chr3R 15891638 15891670 chr3R 15892080 15892110 7 440 14.0 9.0 11.5 0.6 472 chr3R 15891638 intron CG14877 - chr3R 15891874 intron CG14877 - chr3R 15892110 intron CG14877 - chr3R_7_15890001 chr3R_15890001 RAL-373_125b 2735 chr3R 16033402 16033431 chr3R 16033533 16033562 7 131 5.0 13.5 9.2 0.7 160 chr3R 16033402 intron pnr + chr3R 16033482 intron pnr + chr3R 16033562 intron pnr + chr3R_7_16030001 chr3R_16030001 RAL-373_125b 2736 chr3R 16048823 16048880 chr3R 16048953 16048999 11 126 14.0 18.5 16.2 0.6 176 chr3R 16048823 intron ird5 - chr3R 16048911 intron ird5 - chr3R 16048999 intron ird5 - chr3R_11_16045001 chr3R_16045001 RAL-373_125b 2737 chr3R 16105599 16105653 chr3R 16105768 16105823 10 168 7.5 12.5 10.0 0.9 224 chr3R 16105599 3` UTR Akt1 + chr3R 16105711 intergenic Akt1 + chr3R 16105823 intergenic Akt1 + chr3R_10_16105001 chr3R_16105001 RAL-373_125b 2738 chr3R 16154500 16154572 chr3R 16154638 16154705 5 136 4.0 5.0 4.5 0.9 205 chr3R 16154500 intergenic CG6006 + chr3R 16154602 intergenic CG6006 + chr3R 16154705 intergenic CG6006 + chr3R_5_16150001 chr3R_16150001 RAL-373_125b 2739 chr3R 16189363 16189437 chr3R 16189816 16189890 invader4 11 453 7.0 3.5 5.2 1.8 527 chr3R 16189363 intron sra + chr3R 16189626 intron sra + chr3R 16189890 intron sra + chr3R_11_16185001 chr3R_16185001 RAL-373_125b 2740 chr3R 16210800 16210832 chr3R 16210936 16210968 4 136 19.0 17.0 18.0 0.2 168 chr3R 16210800 intergenic not near genes chr3R 16210884 intergenic not near genes chr3R 16210968 intergenic not near genes chr3R_4_16210001 chr3R_16210001 RAL-373_125b 2741 chr3R 16246489 16246557 chr3R 16246605 16246638 8 112 3.5 6.5 5.0 1.3 149 chr3R 16246489 intron tara + chr3R 16246564 intron tara + chr3R 16246638 intron tara + chr3R_8_16245001 chr3R_16245001 RAL-373_125b 2742 chr3R 16255650 16255675 chr3R 16255781 16255801 5 130 19.0 12.5 15.8 0.3 151 chr3R 16255650 intron tara + chr3R 16255726 intron tara + chr3R 16255801 intron tara + chr3R_5_16255001 chr3R_16255001 RAL-373_125b 2743 chr3R 16260910 16260953 chr3R 16261058 16261094 5 147 11.0 12.0 11.5 0.4 184 chr3R 16260910 intergenic bor - chr3R 16261002 intergenic bor - chr3R 16261094 intergenic bor - chr3R_5_16260001 chr3R_16260001 RAL-373_125b 2744 chr3R 16264075 16264136 chr3R 16264250 16264311 5 172 11.5 14.0 12.8 0.4 236 chr3R 16264075 5` UTR bor - chr3R 16264193 intergenic asun +,bor - chr3R 16264311 5` UTR asun + chr3R_5_16260001 chr3R_16260001 RAL-373_125b 2745 chr3R 16499502 16499567 chr3R 16499628 16499700 4 129 17.5 20.0 18.8 0.2 198 chr3R 16499502 intron decay - chr3R 16499601 intron decay - chr3R 16499700 intron decay - chr3R_4_16495001 chr3R_16495001 RAL-373_125b 2746 chr3R 16491950 16492001 chr3R 16500636 16500689 11 8690 35.5 33.5 34.5 0.3 8739 chr3R 16491950 exon Cad89D - chr3R 16496320 intergenic not near genes chr3R 16500689 exon decay - chr3R_11_16495001 chr3R_16495001 RAL-373_125b 2747 chr3R 16519898 16519925 chr3R 16520031 16520058 5 132 19.5 13.5 16.5 0.3 160 chr3R 16519898 intron CG42342 + chr3R 16519978 intron CG42342 + chr3R 16520058 intron CG42342 + chr3R_5_16515001 chr3R_16515001 RAL-373_125b 2748 chr3R 16521166 16521225 chr3R 16521293 16521359 11 131 11.5 12.0 11.8 0.9 193 chr3R 16521166 intron CG42342 + chr3R 16521262 intron CG42342 + chr3R 16521359 intron CG42342 + chr3R_11_16520001 chr3R_16520001 RAL-373_125b 2749 chr3R 16534417 16534452 chr3R 16534555 16534590 7 137 6.5 6.0 6.2 1.0 173 chr3R 16534417 intron CG42342 + chr3R 16534504 intron CG42342 + chr3R 16534590 intron CG42342 + chr3R_7_16530001 chr3R_16530001 RAL-373_125b 2750 chr3R 16557626 16557843 chr3R 16557771 16557972 5 140 12.0 12.0 12.0 0.4 346 chr3R 16557626 intron CG42342 + chr3R 16557799 intron CG42342 + chr3R 16557972 intron CG42342 + chr3R_5_16555001 chr3R_16555001 RAL-373_125b 2751 chr3R 16576610 16576644 chr3R 16576843 16576877 5 231 17.5 21.0 19.2 0.2 267 chr3R 16576610 intron Scp2 - chr3R 16576744 intron Scp2 - chr3R 16576877 intron Scp2 - chr3R_5_16575001 chr3R_16575001 RAL-373_125b 2752 chr3R 16582868 16582912 chr3R 16582987 16583031 12 122 7.0 6.5 6.8 1.5 163 chr3R 16582868 intron Scp2 - chr3R 16582950 intron Scp2 - chr3R 16583031 intron Scp2 - chr3R_12_16580001 chr3R_16580001 RAL-373_125b 2753 chr3R 16651105 16651177 chr3R 16651232 16651299 8 123 10.0 11.5 10.8 0.7 194 chr3R 16651105 exon CG14906 - chr3R 16651202 intergenic CG14907 -,CG14906 - chr3R 16651299 3` UTR CG14907 - chr3R_8_16650001 chr3R_16650001 RAL-373_125b 2754 chr3R 16659188 16659253 chr3R 16659318 16659318 11 122 15.5 18.5 17.0 0.6 130 chr3R 16659188 intron Ubx - chr3R 16659253 intron Ubx - chr3R 16659318 intron Ubx - chr3R_11_16655001 chr3R_16655001 RAL-373_125b 2755 chr3R 16756277 16756348 chr3R 16762518 16762532 diver 19 6230 3.5 4.5 4.0 3.8 6255 chr3R 16756277 intron bxd - chr3R 16759404 intron bxd - chr3R 16762532 intron bxd - chr3R_19_16755001 chr3R_16755001 RAL-373_125b 2756 chr3R 16772719 16772772 chr3R 16772950 16773003 6 230 2.0 6.5 4.2 1.2 284 chr3R 16772719 intron bxd - chr3R 16772861 3` UTR bxd - chr3R 16773003 3` UTR bxd - chr3R_6_16770001 chr3R_16770001 RAL-373_125b 2757 chr3R 16786714 16786772 chr3R 16786854 16786916 7 142 11.5 13.0 12.2 0.5 202 chr3R 16786714 intergenic not near genes chr3R 16786815 intergenic not near genes chr3R 16786916 intergenic not near genes chr3R_7_16785001 chr3R_16785001 RAL-373_125b 2758 chr3R 16935443 16935508 chr3R 16935612 16935677 9 165 13.0 14.5 13.8 0.6 234 chr3R 16935443 intron Abd-B - chr3R 16935560 intron Abd-B - chr3R 16935677 intron Abd-B - chr3R_9_16935001 chr3R_16935001 RAL-373_125b 2759 chr3R 16987055 16987096 chr3R 16987282 16987324 8 227 16.0 12.0 14.0 0.5 269 chr3R 16987055 intron CG18622 - chr3R 16987190 intron CG18622 - chr3R 16987324 intron CG18622 - chr3R_8_16985001 chr3R_16985001 RAL-373_125b 2760 chr3R 17039779 17039789 chr3R 19736288 19736288 4 2696506 21.0 17.0 19.0 0.2 2696509 chr3R 17039779 exon CG18213 - chr3R 18388034 exon Vha100-4 - chr3R 19736288 intron GluClalpha + chr3R_4_18385001 chr3R_18385001 RAL-373_125b 2761 chr3R 17077738 17077752 chr3R 17077908 17077919 4 171 6.0 3.5 4.8 0.7 181 chr3R 17077738 intron Keap1 - chr3R 17077828 intron Keap1 - chr3R 17077919 intron Keap1 - chr3R_4_17075001 chr3R_17075001 RAL-373_125b 2762 chr3R 17077762 17077807 chr3R 17077901 17077971 9 164 2.5 3.0 2.8 2.4 209 chr3R 17077762 intron Keap1 - chr3R 17077866 intron Keap1 - chr3R 17077971 intron Keap1 - chr3R_9_17075001 chr3R_17075001 RAL-373_125b 2763 chr3R 17080825 17080883 chr3R 17080971 17081029 8 145 7.5 12.0 9.8 0.7 204 chr3R 17080825 intron kuk + chr3R 17080927 intron kuk + chr3R 17081029 intron kuk + chr3R_8_17080001 chr3R_17080001 RAL-373_125b 2764 chr3R 17099522 17099543 chr3R 17099642 17099659 5 120 18.0 15.0 16.5 0.3 137 chr3R 17099522 intron cher - chr3R 17099590 intron cher - chr3R 17099659 intron cher - chr3R_5_17095001 chr3R_17095001 RAL-373_125b 2765 chr3R 17143520 17143561 chr3R 17143915 17143961 5 400 16.0 13.0 14.5 0.3 441 chr3R 17143520 intergenic not near genes chr3R 17143740 intergenic not near genes chr3R 17143961 intergenic not near genes chr3R_5_17140001 chr3R_17140001 RAL-373_125b 2766 chr3R 17169399 17169469 chr3R 17169520 17169596 10 126 11.0 10.5 10.8 0.8 197 chr3R 17169399 intron Mur89F - chr3R 17169498 intron Mur89F - chr3R 17169596 intron Mur89F - chr3R_10_17165001 chr3R_17165001 RAL-373_125b 2767 chr3R 17250208 17250266 chr3R 17250397 17250449 5 188 9.5 17.0 13.2 0.4 241 chr3R 17250208 intron beat-IIb - chr3R 17250328 intron beat-IIb - chr3R 17250449 intron beat-IIb - chr3R_5_17250001 chr3R_17250001 RAL-373_125b 2768 chr3R 17268631 17268656 chr3R 17268796 17268823 6 169 14.0 15.0 14.5 0.4 192 chr3R 17268631 intergenic not near genes chr3R 17268727 intergenic not near genes chr3R 17268823 intergenic not near genes chr3R_6_17265001 chr3R_17265001 RAL-373_125b 2769 chr3R 17271778 17271826 chr3R 17271912 17271944 9 130 4.0 7.5 5.8 1.3 166 chr3R 17271778 intergenic not near genes chr3R 17271861 intergenic not near genes chr3R 17271944 intergenic not near genes chr3R_9_17270001 chr3R_17270001 RAL-373_125b 2770 chr3R 17290425 17290461 chr3R 17290544 17290579 5 126 13.0 13.5 13.2 0.4 154 chr3R 17290425 intergenic not near genes chr3R 17290502 intergenic not near genes chr3R 17290579 intergenic not near genes chr3R_5_17290001 chr3R_17290001 RAL-373_125b 2771 chr3R 17294376 17294415 chr3R 17294488 17294542 6 119 14.0 12.0 13.0 0.4 166 chr3R 17294376 intergenic not near genes chr3R 17294459 intergenic not near genes chr3R 17294542 intergenic not near genes chr3R_6_17290001 chr3R_17290001 RAL-373_125b 2772 chr3R 17294642 17294691 chr3R 17295115 17295162 BS 14 476 6.0 10.0 8.0 1.6 520 chr3R 17294642 intergenic not near genes chr3R 17294902 intergenic not near genes chr3R 17295162 intergenic not near genes chr3R_14_17290001 chr3R_17290001 RAL-373_125b 2773 chr3R 17298209 17298263 chr3R 17299230 17299284 5 1022 29.0 21.0 25.0 0.2 1075 chr3R 17298209 intergenic not near genes chr3R 17298746 intergenic not near genes chr3R 17299284 intergenic not near genes chr3R_5_17295001 chr3R_17295001 RAL-373_125b 2774 chr3R 17327502 17327560 chr3R 17327618 17327684 4 124 8.5 9.0 8.8 0.4 182 chr3R 17327502 intron beat-IIa - chr3R 17327593 intron beat-IIa - chr3R 17327684 intron beat-IIa - chr3R_4_17325001 chr3R_17325001 RAL-373_125b 2775 chr3R 17334153 17334189 chr3R 17334275 17334318 4 126 14.0 14.5 14.2 0.3 165 chr3R 17334153 intron beat-IIa - chr3R 17334236 intron beat-IIa - chr3R 17334318 intron beat-IIa - chr3R_4_17330001 chr3R_17330001 RAL-373_125b 2776 chr3R 17346639 17346702 chr3R 17348252 17348315 F-element 12 1611 5.0 7.0 6.0 1.7 1676 chr3R 17346639 intron beat-IIa - chr3R 17347477 intron beat-IIa - chr3R 17348315 intron beat-IIa - chr3R_12_17345001 chr3R_17345001 RAL-373_125b 2777 chr3R 17355463 17355470 chr3R 17355576 17355592 4 120 18.0 14.0 16.0 0.2 129 chr3R 17355463 intron beat-IIa - chr3R 17355528 intron beat-IIa - chr3R 17355592 intron beat-IIa - chr3R_4_17355001 chr3R_17355001 RAL-373_125b 2778 chr3R 17355471 17355517 chr3R 17355568 17355645 8 123 13.0 15.0 14.0 0.5 174 chr3R 17355471 intron beat-IIa - chr3R 17355558 intron beat-IIa - chr3R 17355645 intron beat-IIa - chr3R_8_17355001 chr3R_17355001 RAL-373_125b 2779 chr3R 17417649 17417684 chr3R 17417763 17417810 6 122 14.0 16.0 15.0 0.4 161 chr3R 17417649 exon CG33333 + chr3R 17417730 exon CG33333 + chr3R 17417810 exon CG33333 + chr3R_6_17415001 chr3R_17415001 RAL-373_125b 2780 chr3R 17439398 17439467 chr3R 17439736 17439825 10 358 19.5 12.0 15.8 0.6 427 chr3R 17439398 intron,exon CG5873 +,CG14331 - chr3R 17439612 intron,intron CG5873 +,CG14331 - chr3R 17439825 intron,intron CG5873 +,CG14331 - chr3R_10_17435001 chr3R_17435001 RAL-373_125b 2781 chr3R 17442143 17442206 chr3R 17442260 17442334 10 118 17.5 15.5 16.5 0.6 191 chr3R 17442143 intron CG5873 + chr3R 17442238 intron CG5873 + chr3R 17442334 intron CG5873 + chr3R_10_17440001 chr3R_17440001 RAL-373_125b 2782 chr3R 17461156 17461213 chr3R 17461285 17461345 9 130 6.0 5.5 5.8 1.3 189 chr3R 17461156 intergenic not near genes chr3R 17461250 intergenic not near genes chr3R 17461345 intergenic not near genes chr3R_9_17460001 chr3R_17460001 RAL-373_125b 2783 chr3R 17497920 17497983 chr3R 17498051 17498119 14 132 5.0 2.0 3.5 3.1 199 chr3R 17497920 intron Dscam3 - chr3R 17498020 intron Dscam3 - chr3R 17498119 intron Dscam3 - chr3R_14_17495001 chr3R_17495001 RAL-373_125b 2784 chr3R 17500585 17500623 chr3R 17500766 17500804 7 180 16.0 21.0 18.5 0.4 219 chr3R 17500585 intron Dscam3 - chr3R 17500694 intron Dscam3 - chr3R 17500804 intron Dscam3 - chr3R_7_17500001 chr3R_17500001 RAL-373_125b 2785 chr3R 17507039 17507113 chr3R 17507179 17507230 6 125 12.5 12.5 12.5 0.4 191 chr3R 17507039 intergenic not near genes chr3R 17507134 intergenic not near genes chr3R 17507230 intergenic not near genes chr3R_6_17505001 chr3R_17505001 RAL-373_125b 2786 chr3R 17521164 17521218 chr3R 17521293 17521349 10 130 13.5 10.5 12.0 0.8 185 chr3R 17521164 intergenic not near genes chr3R 17521256 intergenic not near genes chr3R 17521349 intergenic not near genes chr3R_10_17520001 chr3R_17520001 RAL-373_125b 2787 chr3R 17524734 17524756 chr3R 17524861 17524883 6 126 21.0 14.5 17.8 0.3 149 chr3R 17524734 intergenic not near genes chr3R 17524808 intergenic not near genes chr3R 17524883 intergenic not near genes chr3R_6_17520001 chr3R_17520001 RAL-373_125b 2788 chr3R 17591250 17591300 chr3R 17591731 17591776 F-element 14 476 10.5 5.0 7.8 1.6 526 chr3R 17591250 intergenic not near genes chr3R 17591513 intergenic not near genes chr3R 17591776 intergenic not near genes chr3R_14_17590001 chr3R_17590001 RAL-373_125b 2789 chr3R 17624928 17624972 chr3R 17625054 17625098 7 125 10.0 11.0 10.5 0.6 170 chr3R 17624928 intergenic AttD + chr3R 17625013 intergenic AttD + chr3R 17625098 intergenic AttD + chr3R_7_17625001 chr3R_17625001 RAL-373_125b 2790 chr3R 17635455 17635467 chr3R 17635559 17635587 4 113 21.0 16.0 18.5 0.2 132 chr3R 17635455 intron CG43175 + chr3R 17635521 intron CG43175 + chr3R 17635587 intron CG43175 + chr3R_4_17635001 chr3R_17635001 RAL-373_125b 2791 chr3R 17638276 17638336 chr3R 17638807 17638870 roo 10 534 2.0 4.5 3.2 2.4 594 chr3R 17638276 intron CG43175 + chr3R 17638573 intron CG43175 + chr3R 17638870 intron,intron CG43175 +,CR45222 + chr3R_10_17635001 chr3R_17635001 RAL-373_125b 2792 chr3R 17653031 17653109 chr3R 17653171 17653242 13 136 3.0 2.5 2.8 3.4 211 chr3R 17653031 intron,intron CG14322 +,CR45223 - chr3R 17653136 intron,intron CG14322 +,CR45223 - chr3R 17653242 intron,intron CG14322 +,CR45223 - chr3R_13_17650001 chr3R_17650001 RAL-373_125b 2793 chr3R 17678568 17678607 chr3R 17678985 17679034 13 432 20.0 6.0 13.0 0.9 466 chr3R 17678568 intron alt - chr3R 17678801 intron alt - chr3R 17679034 intron alt - chr3R_13_17675001 chr3R_17675001 RAL-373_125b 2794 chr3R 17702525 17702581 chr3R 17702678 17702746 11 161 12.5 11.5 12.0 0.8 221 chr3R 17702525 intron osa - chr3R 17702636 intron osa - chr3R 17702746 intron osa - chr3R_11_17700001 chr3R_17700001 RAL-373_125b 2795 chr3R 17715374 17715447 chr3R 17715631 17715704 8 255 11.0 12.0 11.5 0.6 330 chr3R 17715374 intron osa - chr3R 17715539 intron osa - chr3R 17715704 intron osa - chr3R_8_17715001 chr3R_17715001 RAL-373_125b 2796 chr3R 17727049 17727083 chr3R 17727175 17727216 5 126 15.0 14.0 14.5 0.3 167 chr3R 17727049 intron Lgr1 + chr3R 17727132 intron Lgr1 + chr3R 17727216 intron Lgr1 + chr3R_5_17725001 chr3R_17725001 RAL-373_125b 2797 chr3R 17734083 17734133 chr3R 17734222 17734257 6 133 15.5 22.0 18.8 0.3 174 chr3R 17734083 exon CG14321 + chr3R 17734170 3` UTR CG14321 + chr3R 17734257 3` UTR CG14321 + chr3R_6_17730001 chr3R_17730001 RAL-373_125b 2798 chr3R 17734800 17734857 chr3R 17734964 17735020 15 163 3.5 0.0 1.8 5.4 220 chr3R 17734800 intergenic CG14321 + chr3R 17734910 intergenic not near genes chr3R 17735020 intergenic not near genes chr3R_15_17730001 chr3R_17730001 RAL-373_125b 2799 chr3R 17773334 17773389 chr3R 17773479 17773523 8 142 15.0 16.5 15.8 0.5 189 chr3R 17773334 exon CG43102 - chr3R 17773428 intron CG43102 - chr3R 17773523 exon CG43102 - chr3R_8_17770001 chr3R_17770001 RAL-373_125b 2800 chr3R 17811146 17811188 chr3R 17811276 17811306 8 127 9.5 0.5 5.0 1.3 160 chr3R 17811146 intergenic CG18012 -,tinc + chr3R 17811226 intergenic CG18012 -,tinc + chr3R 17811306 intergenic CG18012 -,tinc + chr3R_8_17810001 chr3R_17810001 RAL-373_125b 2801 chr3R 17818853 17818908 chr3R 17818982 17819037 9 127 11.5 14.5 13.0 0.6 184 chr3R 17818853 intron tinc + chr3R 17818945 intron tinc + chr3R 17819037 intron tinc + chr3R_9_17815001 chr3R_17815001 RAL-373_125b 2802 chr3R 17823165 17823231 chr3R 17823292 17823353 13 130 3.0 6.0 4.5 2.4 188 chr3R 17823165 intron tinc + chr3R 17823259 intron tinc + chr3R 17823353 intron tinc + chr3R_13_17820001 chr3R_17820001 RAL-373_125b 2803 chr3R 17824870 17824938 chr3R 17825003 17825071 12 130 12.5 11.0 11.8 0.9 201 chr3R 17824870 intron tinc + chr3R 17824970 intron tinc + chr3R 17825071 intron tinc + chr3R_12_17820001 chr3R_17820001 RAL-373_125b 2804 chr3R 17856006 17856045 chr3R 17856151 17856186 5 145 10.0 14.0 12.0 0.4 180 chr3R 17856006 intron tinc + chr3R 17856096 intron tinc + chr3R 17856186 intron tinc + chr3R_5_17855001 chr3R_17855001 RAL-373_125b 2805 chr3R 17891736 17891796 chr3R 17891884 17891955 11 155 13.0 13.5 13.2 0.8 219 chr3R 17891736 intron Rim - chr3R 17891846 intron Rim - chr3R 17891955 intron Rim - chr3R_11_17890001 chr3R_17890001 RAL-373_125b 2806 chr3R 17898329 17898348 chr3R 17898461 17898480 6 128 15.5 22.0 18.8 0.3 151 chr3R 17898329 intron Rim - chr3R 17898404 intron Rim - chr3R 17898480 intron Rim - chr3R_6_17895001 chr3R_17895001 RAL-373_125b 2807 chr3R 17925824 17925832 chr3R 17927333 17927346 hobo 4 1514 14.0 5.0 9.5 0.4 1522 chr3R 17925824 intron cpo + chr3R 17926585 intron cpo + chr3R 17927346 intron cpo + chr3R_4_17925001 chr3R_17925001 RAL-373_125b 2808 chr3R 17925837 17925861 chr3R 17927327 17927346 hobo 7 1503 10.5 4.5 7.5 0.8 1509 chr3R 17925837 intron cpo + chr3R 17926592 intron cpo + chr3R 17927346 intron cpo + chr3R_7_17925001 chr3R_17925001 RAL-373_125b 2809 chr3R 17942283 17942351 chr3R 17942412 17942491 9 137 17.0 14.0 15.5 0.5 208 chr3R 17942283 intron cpo + chr3R 17942387 intron cpo + chr3R 17942491 intron cpo + chr3R_9_17940001 chr3R_17940001 RAL-373_125b 2810 chr3R 18006386 18006396 chr3R 18006518 18006525 5 136 15.5 13.5 14.5 0.3 139 chr3R 18006386 intron cpo + chr3R 18006456 intron cpo + chr3R 18006525 intron cpo + chr3R_5_18005001 chr3R_18005001 RAL-373_125b 2811 chr3R 18018886 18018919 chr3R 18019026 18019029 5 133 15.0 11.5 13.2 0.4 143 chr3R 18018886 3` UTR cpo + chr3R 18018958 intergenic cpo +,DNaseII + chr3R 18019029 intergenic cpo +,DNaseII + chr3R_5_18015001 chr3R_18015001 RAL-373_125b 2812 chr3R 18025293 18025346 chr3R 18025415 18025476 7 129 3.5 7.0 5.2 1.1 183 chr3R 18025293 exon CG7794 + chr3R 18025384 intergenic CG7794 + chr3R 18025476 intergenic CG7794 + chr3R_7_18025001 chr3R_18025001 RAL-373_125b 2813 chr3R 18032746 18032797 chr3R 18040456 18040515 opus 7 7718 0.5 2.5 1.5 2.8 7769 chr3R 18032746 intergenic not near genes chr3R 18036630 intergenic not near genes chr3R 18040515 intergenic not near genes chr3R_7_18035001 chr3R_18035001 RAL-373_125b 2814 chr3R 18061401 18061445 chr3R 18061537 18061587 5 141 7.5 0.0 3.8 1.0 186 chr3R 18061401 intergenic not near genes chr3R 18061494 intergenic not near genes chr3R 18061587 intergenic not near genes chr3R_5_18060001 chr3R_18060001 RAL-373_125b 2815 chr3R 18101341 18101377 chr3R 18101454 18101503 10 119 12.0 9.5 10.8 0.8 162 chr3R 18101341 intron sr + chr3R 18101422 intron sr + chr3R 18101503 intron sr + chr3R_10_18100001 chr3R_18100001 RAL-373_125b 2816 chr3R 18112323 18112366 chr3R 18112456 18112499 7 133 8.0 6.5 7.2 0.9 176 chr3R 18112323 intron sr + chr3R 18112411 intron sr + chr3R 18112499 intron sr + chr3R_7_18110001 chr3R_18110001 RAL-373_125b 2817 chr3R 18121102 18121138 chr3R 18121227 18121276 4 134 17.5 19.5 18.5 0.2 174 chr3R 18121102 intron sr + chr3R 18121189 intron sr + chr3R 18121276 intron sr + chr3R_4_18120001 chr3R_18120001 RAL-373_125b 2818 chr3R 18122840 18122891 chr3R 18122967 18123018 12 126 5.5 5.5 5.5 1.8 178 chr3R 18122840 intron sr + chr3R 18122929 intron sr + chr3R 18123018 intron sr + chr3R_12_18120001 chr3R_18120001 RAL-373_125b 2819 chr3R 18210769 18210825 chr3R 18210900 18210956 8 131 16.5 17.5 17.0 0.4 187 chr3R 18210769 intron CG7985 + chr3R 18210862 intron CG7985 + chr3R 18210956 intron CG7985 + chr3R_8_18210001 chr3R_18210001 RAL-373_125b 2820 chr3R 18215728 18215767 chr3R 18215936 18215980 8 214 0.0 4.0 2.0 2.7 252 chr3R 18215728 intergenic CG14314 + chr3R 18215854 intergenic CG14314 + chr3R 18215980 intergenic CG14314 + chr3R_8_18215001 chr3R_18215001 RAL-373_125b 2821 chr3R 18235378 18235416 chr3R 18235495 18235548 7 129 23.5 19.5 21.5 0.3 170 chr3R 18235378 intergenic not near genes chr3R 18235463 intergenic not near genes chr3R 18235548 intergenic not near genes chr3R_7_18235001 chr3R_18235001 RAL-373_125b 2822 chr3R 18291814 18291872 chr3R 18291947 18292005 11 132 15.5 16.0 15.8 0.7 191 chr3R 18291814 intron l(3)05822 - chr3R 18291910 intron l(3)05822 - chr3R 18292005 intron l(3)05822 - chr3R_11_18290001 chr3R_18290001 RAL-373_125b 2823 chr3R 18302953 18302978 chr3R 18303096 18303132 6 152 5.0 0.0 2.5 1.7 179 chr3R 18302953 intergenic CG7126 -,PKD - chr3R 18303042 intergenic CG7126 -,PKD - chr3R 18303132 intergenic PKD -,CG7126 - chr3R_6_18300001 chr3R_18300001 RAL-373_125b 2824 chr3R 18328568 18328588 chr3R 18328689 18328714 4 125 5.5 9.5 7.5 0.5 146 chr3R 18328568 intron CG31235 - chr3R 18328641 intron CG31235 - chr3R 18328714 intron CG31235 - chr3R_4_18325001 chr3R_18325001 RAL-373_125b 2825 chr3R 18394428 18394494 chr3R 18394555 18394616 18 123 7.0 7.5 7.2 2.2 188 chr3R 18394428 intron Vha100-2 - chr3R 18394522 intron Vha100-2 - chr3R 18394616 intron Vha100-2 - chr3R_18_18390001 chr3R_18390001 RAL-373_125b 2826 chr3R 18433979 18434051 chr3R 18434108 18434180 5 129 11.5 8.0 9.8 0.5 201 chr3R 18433979 intron fru - chr3R 18434080 intron fru - chr3R 18434180 intron fru - chr3R_5_18430001 chr3R_18430001 RAL-373_125b 2827 chr3R 18498144 18498186 chr3R 18498268 18498312 9 126 6.5 8.0 7.2 1.1 168 chr3R 18498144 intron fru - chr3R 18498228 intron fru - chr3R 18498312 intron fru - chr3R_9_18495001 chr3R_18495001 RAL-373_125b 2828 chr3R 18500715 18500735 chr3R 18500885 18500905 6 171 4.0 12.5 8.2 0.7 190 chr3R 18500715 intron fru - chr3R 18500810 intron fru - chr3R 18500905 intron fru - chr3R_6_18500001 chr3R_18500001 RAL-373_125b 2829 chr3R 18538355 18538367 chr3R 18538485 18538497 4 130 12.0 9.0 10.5 0.3 142 chr3R 18538355 intron fru - chr3R 18538426 intron fru - chr3R 18538497 intron fru - chr3R_4_18535001 chr3R_18535001 RAL-373_125b 2830 chr3R 18549422 18549453 chr3R 18549549 18549580 4 126 14.0 13.0 13.5 0.3 158 chr3R 18549422 intergenic not near genes chr3R 18549501 intergenic not near genes chr3R 18549580 intergenic not near genes chr3R_4_18545001 chr3R_18545001 RAL-373_125b 2831 chr3R 18551847 18551891 chr3R 18552003 18552037 10 152 11.5 16.0 13.8 0.7 190 chr3R 18551847 intergenic not near genes chr3R 18551942 intergenic not near genes chr3R 18552037 intergenic not near genes chr3R_10_18550001 chr3R_18550001 RAL-373_125b 2832 chr3R 18559390 18559518 chr3R 18559517 18559657 4 134 0.0 0.0 0.0 4.0 267 chr3R 18559390 intergenic CG7691 + chr3R 18559524 intergenic CG7691 + chr3R 18559657 intergenic CG7691 + chr3R_4_18555001 chr3R_18555001 RAL-373_125b 2833 chr3R 18562528 18562588 chr3R 18562692 18562758 10 168 13.0 12.0 12.5 0.7 230 chr3R 18562528 intergenic not near genes chr3R 18562643 intergenic not near genes chr3R 18562758 intergenic not near genes chr3R_10_18560001 chr3R_18560001 RAL-373_125b 2834 chr3R 18606470 18606528 chr3R 18610743 18610793 F-element 16 4276 3.5 6.0 4.8 2.8 4323 chr3R 18606470 intron,intron qin +,CG14304 - chr3R 18608632 intron,intron qin +,CG14304 - chr3R 18610793 intron,intron qin +,CG14304 - chr3R_16_18605001 chr3R_18605001 RAL-373_125b 2835 chr3R 18615336 18615392 chr3R 18615460 18615521 6 123 10.0 11.5 10.8 0.5 185 chr3R 18615336 intron,intron qin +,CG14304 - chr3R 18615428 intron,intron qin +,CG14304 - chr3R 18615521 intron,intron qin +,CG14304 - chr3R_6_18615001 chr3R_18615001 RAL-373_125b 2836 chr3R 18640418 18640486 chr3R 18640551 18640618 8 131 16.0 16.5 16.2 0.5 200 chr3R 18640418 intron,intron qin +,CG14301 - chr3R 18640518 intron,intron qin +,CG14301 - chr3R 18640618 intron,intron qin +,CG14301 - chr3R_8_18640001 chr3R_18640001 RAL-373_125b 2837 chr3R 18670348 18670393 chr3R 18670484 18670536 11 140 11.0 7.5 9.2 1.1 188 chr3R 18670348 intron CG7702 + chr3R 18670442 intron CG7702 + chr3R 18670536 intron CG7702 + chr3R_11_18670001 chr3R_18670001 RAL-373_125b 2838 chr3R 18703234 18703314 chr3R 18703392 18703473 6 159 11.5 10.5 11.0 0.5 239 chr3R 18703234 intergenic not near genes chr3R 18703354 intergenic not near genes chr3R 18703473 intergenic not near genes chr3R_6_18700001 chr3R_18700001 RAL-373_125b 2839 chr3R 18711103 18711132 chr3R 18711220 18711264 7 116 16.5 12.0 14.2 0.5 161 chr3R 18711103 intron,intron Cha +,VAChT + chr3R 18711184 intron,intron Cha +,VAChT + chr3R 18711264 intron,intron Cha +,VAChT + chr3R_7_18710001 chr3R_18710001 RAL-373_125b 2840 chr3R 18722925 18722954 chr3R 18723060 18723089 6 135 9.5 13.5 11.5 0.5 164 chr3R 18722925 intron Cha + chr3R 18723007 intron Cha + chr3R 18723089 intron Cha + chr3R_6_18720001 chr3R_18720001 RAL-373_125b 2841 chr3R 18730006 18730028 chr3R 18730117 18730137 4 115 19.5 19.0 19.2 0.2 131 chr3R 18730006 exon Cha + chr3R 18730072 intron Cha + chr3R 18730137 exon Cha + chr3R_4_18730001 chr3R_18730001 RAL-373_125b 2842 chr3R 18772415 18772466 chr3R 18773006 18773072 7 603 19.0 10.0 14.5 0.5 657 chr3R 18772415 intron CG7720 - chr3R 18772744 intron CG7720 - chr3R 18773072 intron CG7720 - chr3R_7_18770001 chr3R_18770001 RAL-373_125b 2843 chr3R 18781674 18781724 chr3R 18781791 18781843 6 118 11.5 13.5 12.5 0.4 169 chr3R 18781674 intron CG7720 - chr3R 18781758 intron CG7720 - chr3R 18781843 intron CG7720 - chr3R_6_18780001 chr3R_18780001 RAL-373_125b 2844 chr3R 18807293 18807321 chr3R 18807420 18807428 8 123 10.0 0.0 5.0 1.3 135 chr3R 18807293 intron CG18208 - chr3R 18807360 intron CG18208 - chr3R 18807428 intron CG18208 - chr3R_8_18805001 chr3R_18805001 RAL-373_125b 2845 chr3R 18807331 18807456 chr3R 18807418 18807578 4 118 2.0 0.5 1.2 1.8 247 chr3R 18807331 intron CG18208 - chr3R 18807454 intron CG18208 - chr3R 18807578 intron CG18208 - chr3R_4_18805001 chr3R_18805001 RAL-373_125b 2846 chr3R 18809594 18809641 chr3R 18809730 18809777 7 134 12.5 10.5 11.5 0.6 183 chr3R 18809594 intron CG18208 - chr3R 18809686 intron CG18208 - chr3R 18809777 intron CG18208 - chr3R_7_18805001 chr3R_18805001 RAL-373_125b 2847 chr3R 18812030 18812101 chr3R 18812153 18812209 18 122 8.5 10.0 9.2 1.8 179 chr3R 18812030 intron CG18208 - chr3R 18812120 intron CG18208 - chr3R 18812209 intron CG18208 - chr3R_18_18810001 chr3R_18810001 RAL-373_125b 2848 chr3R 18817492 18817540 chr3R 18817624 18817698 10 148 0.0 2.0 1.0 5.0 206 chr3R 18817492 intron CG18208 - chr3R 18817595 intron CG18208 - chr3R 18817698 intron CG18208 - chr3R_10_18815001 chr3R_18815001 RAL-373_125b 2849 chr3R 18839172 18839220 chr3R 18839289 18839314 4 104 13.0 9.0 11.0 0.3 142 chr3R 18839172 intron CG18208 - chr3R 18839243 intron CG18208 - chr3R 18839314 intron CG18208 - chr3R_4_18835001 chr3R_18835001 RAL-373_125b 2850 chr3R 18857380 18857415 chr3R 18857476 18857533 9 111 8.0 6.5 7.2 1.1 153 chr3R 18857380 intergenic not near genes chr3R 18857456 intergenic not near genes chr3R 18857533 intergenic not near genes chr3R_9_18855001 chr3R_18855001 RAL-373_125b 2851 chr3R 18863157 18863181 chr3R 18863293 18863305 4 133 3.5 14.0 8.8 0.4 148 chr3R 18863157 intergenic not near genes chr3R 18863231 intergenic not near genes chr3R 18863305 intergenic not near genes chr3R_4_18860001 chr3R_18860001 RAL-373_125b 2852 chr3R 18891189 18891248 chr3R 18891318 18891376 14 124 15.0 15.5 15.2 0.9 187 chr3R 18891189 intergenic not near genes chr3R 18891282 intergenic not near genes chr3R 18891376 intergenic not near genes chr3R_14_18890001 chr3R_18890001 RAL-373_125b 2853 chr3R 18910758 18910812 chr3R 18910892 18910946 6 128 19.0 13.5 16.2 0.3 188 chr3R 18910758 intergenic EndoA +,CG14291 - chr3R 18910852 intergenic EndoA +,CG14291 - chr3R 18910946 intergenic CG14291 -,EndoA + chr3R_6_18910001 chr3R_18910001 RAL-373_125b 2854 chr3R 18922790 18922863 chr3R 18922992 18923054 7 198 19.0 18.5 18.8 0.4 264 chr3R 18922790 intron Xrp1 + chr3R 18922922 intron Xrp1 + chr3R 18923054 intron Xrp1 + chr3R_7_18920001 chr3R_18920001 RAL-373_125b 2855 chr3R 18933767 18933807 chr3R 18933886 18933907 13 108 10.5 12.5 11.5 1.0 140 chr3R 18933767 intron CG42613 + chr3R 18933837 intron CG42613 + chr3R 18933907 intron CG42613 + chr3R_13_18930001 chr3R_18930001 RAL-373_125b 2856 chr3R 18988491 18988547 chr3R 18988787 18988856 10 304 16.5 17.0 16.8 0.6 365 chr3R 18988491 intron gukh + chr3R 18988674 intron gukh + chr3R 18988856 intron gukh + chr3R_10_18985001 chr3R_18985001 RAL-373_125b 2857 chr3R 18991371 18991412 chr3R 18991483 18991528 9 114 16.0 20.5 18.2 0.5 157 chr3R 18991371 intron gukh + chr3R 18991450 intron gukh + chr3R 18991528 intron gukh + chr3R_9_18990001 chr3R_18990001 RAL-373_125b 2858 chr3R 19003510 19003584 chr3R 19003644 19003723 5 132 5.0 0.0 2.5 1.4 213 chr3R 19003510 intron gukh + chr3R 19003616 intron gukh + chr3R 19003723 intron gukh + chr3R_5_19000001 chr3R_19000001 RAL-373_125b 2859 chr3R 19056326 19056367 chr3R 19056461 19056476 4 127 15.5 18.0 16.8 0.2 150 chr3R 19056326 intron cdi - chr3R 19056401 intron cdi - chr3R 19056476 intron cdi - chr3R_4_19055001 chr3R_19055001 RAL-373_125b 2860 chr3R 19106790 19106843 chr3R 19106918 19106965 1360 5 129 7.0 6.5 6.8 0.6 175 chr3R 19106790 intron CG6040 + chr3R 19106878 intron CG6040 + chr3R 19106965 intron CG6040 + chr3R_5_19105001 chr3R_19105001 RAL-373_125b 2861 chr3R 19109187 19109235 chr3R 19109335 19109385 9 152 11.0 12.0 11.5 0.7 198 chr3R 19109187 intron CG6040 + chr3R 19109286 intron CG6040 + chr3R 19109385 intron CG6040 + chr3R_9_19105001 chr3R_19105001 RAL-373_125b 2862 chr3R 19136409 19136411 chr3R 19139745 19139808 Bari1 12 3354 41.5 28.0 34.8 0.3 3399 chr3R 19136409 exon Cyp12a4 + chr3R 19138108 intergenic not near genes chr3R 19139808 3` UTR Ppcs - chr3R_12_19135001 chr3R_19135001 RAL-373_125b 2863 chr3R 19140241 19140271 chr3R 19140718 19140760 4 489 14.0 12.5 13.2 0.3 519 chr3R 19140241 3` UTR Ppcs - chr3R 19140500 3` UTR Ppcs - chr3R 19140760 3` UTR Ppcs - chr3R_4_19140001 chr3R_19140001 RAL-373_125b 2864 chr3R 19164250 19164308 chr3R 19164372 19164428 9 121 13.5 10.5 12.0 0.7 178 chr3R 19164250 5` UTR sqz + chr3R 19164339 5` UTR sqz + chr3R 19164428 5` UTR sqz + chr3R_9_19160001 chr3R_19160001 RAL-373_125b 2865 chr3R 19165890 19165924 chr3R 19166039 19166073 8 156 23.0 15.0 19.0 0.4 183 chr3R 19165890 intron sqz + chr3R 19165982 intron sqz + chr3R 19166073 intron sqz + chr3R_8_19165001 chr3R_19165001 RAL-373_125b 2866 chr3R 19187630 19187688 chr3R 19187757 19187815 10 126 15.0 4.5 9.8 0.9 185 chr3R 19187630 intron CG31475 + chr3R 19187722 intron CG31475 + chr3R 19187815 intron CG31475 + chr3R_10_19185001 chr3R_19185001 RAL-373_125b 2867 chr3R 19220149 19220198 chr3R 19220279 19220320 4 127 15.5 16.0 15.8 0.2 171 chr3R 19220149 intron vib - chr3R 19220234 intron vib - chr3R 19220320 intron vib - chr3R_4_19220001 chr3R_19220001 RAL-373_125b 2868 chr3R 19244167 19244214 chr3R 19247492 19247554 11 3326 30.5 32.5 31.5 0.3 3387 chr3R 19244167 exon unc79 - chr3R 19245860 intron unc79 - chr3R 19247554 exon CG5217 - chr3R_11_19245001 chr3R_19245001 RAL-373_125b 2869 chr3R 19265612 19265678 chr3R 19265744 19265799 6 134 10.0 9.0 9.5 0.6 187 chr3R 19265612 intergenic not near genes chr3R 19265706 intergenic not near genes chr3R 19265799 intergenic not near genes chr3R_6_19265001 chr3R_19265001 RAL-373_125b 2870 chr3R 19271387 19271449 chr3R 19271508 19271568 6 120 15.5 17.5 16.5 0.3 181 chr3R 19271387 intergenic not near genes chr3R 19271478 intergenic not near genes chr3R 19271568 intergenic not near genes chr3R_6_19270001 chr3R_19270001 RAL-373_125b 2871 chr3R 19276894 19276950 chr3R 19277024 19277080 8 129 11.5 12.5 12.0 0.6 186 chr3R 19276894 intergenic not near genes chr3R 19276987 intergenic not near genes chr3R 19277080 intergenic not near genes chr3R_8_19275001 chr3R_19275001 RAL-373_125b 2872 chr3R 19289488 19289513 chr3R 19289616 19289621 4 122 23.0 18.5 20.8 0.2 133 chr3R 19289488 intergenic CR43451 + chr3R 19289554 intergenic CR43451 + chr3R 19289621 intergenic CR43451 + chr3R_4_19285001 chr3R_19285001 RAL-373_125b 2873 chr3R 19289516 19289536 chr3R 19289614 19289664 8 118 20.5 18.0 19.2 0.4 148 chr3R 19289516 intergenic CR43451 + chr3R 19289590 intergenic CR43451 + chr3R 19289664 intergenic CR43451 + chr3R_8_19285001 chr3R_19285001 RAL-373_125b 2874 chr3R 19337175 19337203 chr3R 19337294 19337330 11 125 9.5 11.5 10.5 1.0 155 chr3R 19337175 intergenic not near genes chr3R 19337252 intergenic not near genes chr3R 19337330 intergenic not near genes chr3R_11_19335001 chr3R_19335001 RAL-373_125b 2875 chr3R 19340352 19340422 chr3R 19340479 19340549 11 127 13.0 10.0 11.5 0.9 197 chr3R 19340352 intergenic not near genes chr3R 19340450 intergenic not near genes chr3R 19340549 intergenic not near genes chr3R_11_19340001 chr3R_19340001 RAL-373_125b 2876 chr3R 19344630 19344712 chr3R 19344815 19344852 9 170 3.0 1.0 2.0 3.0 222 chr3R 19344630 intergenic not near genes chr3R 19344741 intergenic not near genes chr3R 19344852 intergenic not near genes chr3R_9_19340001 chr3R_19340001 RAL-373_125b 2877 chr3R 19367614 19367653 chr3R 19367735 19367769 6 124 3.0 5.5 4.2 1.2 155 chr3R 19367614 intergenic not near genes chr3R 19367692 intergenic not near genes chr3R 19367769 intergenic not near genes chr3R_6_19365001 chr3R_19365001 RAL-373_125b 2878 chr3R 19417515 19417554 chr3R 19417653 19417702 4 140 9.5 13.5 11.5 0.3 187 chr3R 19417515 intron CG31221 + chr3R 19417608 intron CG31221 + chr3R 19417702 intron CG31221 + chr3R_4_19415001 chr3R_19415001 RAL-373_125b 2879 chr3R 19418366 19418496 chr3R 19418508 19418640 12 140 1.0 1.5 1.2 5.5 274 chr3R 19418366 intron CG31221 + chr3R 19418503 intron CG31221 + chr3R 19418640 intron CG31221 + chr3R_12_19415001 chr3R_19415001 RAL-373_125b 2880 chr3R 19437897 19437956 chr3R 19438128 19438187 10 226 3.0 7.0 5.0 1.7 290 chr3R 19437897 intron CG31221 + chr3R 19438042 intron CG31221 + chr3R 19438187 intron CG31221 + chr3R_10_19435001 chr3R_19435001 RAL-373_125b 2881 chr3R 19454974 19455034 chr3R 19455102 19455162 13 126 12.0 9.5 10.8 1.1 188 chr3R 19454974 intron CG31221 + chr3R 19455068 intron CG31221 + chr3R 19455162 intron CG31221 + chr3R_13_19455001 chr3R_19455001 RAL-373_125b 2882 chr3R 19490405 19490466 chr3R 19490539 19490595 6 134 14.5 13.5 14.0 0.4 190 chr3R 19490405 intron,exon Dys +,CG15025 - chr3R 19490500 intron,intron Dys +,CG15025 - chr3R 19490595 intron,exon Dys +,CG15025 - chr3R_6_19490001 chr3R_19490001 RAL-373_125b 2883 chr3R 19494366 19494404 chr3R 19494496 19494534 10 130 3.0 9.5 6.2 1.4 168 chr3R 19494366 intron Dys + chr3R 19494450 intron Dys + chr3R 19494534 intron Dys + chr3R_10_19490001 chr3R_19490001 RAL-373_125b 2884 chr3R 19559433 19559506 chr3R 19559561 19559633 10 120 15.5 15.0 15.2 0.6 200 chr3R 19559433 intron Dys + chr3R 19559533 intron Dys + chr3R 19559633 intron Dys + chr3R_10_19555001 chr3R_19555001 RAL-373_125b 2885 chr3R 19564969 19564996 chr3R 19565098 19565125 6 129 12.0 15.5 13.8 0.4 156 chr3R 19564969 intron Dys + chr3R 19565047 intron Dys + chr3R 19565125 intron Dys + chr3R_6_19565001 chr3R_19565001 RAL-373_125b 2886 chr3R 19567496 19567569 chr3R 19567629 19567705 4 135 14.5 9.0 11.8 0.3 209 chr3R 19567496 intron Dys + chr3R 19567600 intron Dys + chr3R 19567705 intron Dys + chr3R_4_19565001 chr3R_19565001 RAL-373_125b 2887 chr3R 19599544 19599767 chr3R 19599642 19599913 9 124 22.0 10.5 16.2 0.5 369 chr3R 19599544 intergenic not near genes chr3R 19599728 intergenic not near genes chr3R 19599913 intergenic not near genes chr3R_9_19595001 chr3R_19595001 RAL-373_125b 2888 chr3R 19604637 19604695 chr3R 19604813 19604867 27 180 5.5 3.0 4.2 5.2 230 chr3R 19604637 exon CG7342 + chr3R 19604752 intron CG7342 + chr3R 19604867 intron CG7342 + chr3R_27_19600001 chr3R_19600001 RAL-373_125b 2889 chr3R 19612006 19612051 chr3R 19615994 19616051 8 3990 27.0 27.0 27.0 0.3 4045 chr3R 19612006 exon CG17752 + chr3R 19614028 exon CG16727 + chr3R 19616051 3` UTR CG6231 - chr3R_8_19610001 chr3R_19610001 RAL-373_125b 2890 chr3R 19642605 19642675 chr3R 19642749 19642814 9 137 14.0 16.0 15.0 0.6 209 chr3R 19642605 5` UTR subdued - chr3R 19642710 5` UTR subdued - chr3R 19642814 intergenic subdued -,Vha13 - chr3R_9_19640001 chr3R_19640001 RAL-373_125b 2891 chr3R 19667957 19668015 chr3R 19668086 19668148 7 131 13.5 16.0 14.8 0.4 191 chr3R 19667957 intron CG7432 + chr3R 19668052 intron CG7432 + chr3R 19668148 intron CG7432 + chr3R_7_19665001 chr3R_19665001 RAL-373_125b 2892 chr3R 19689773 19689829 chr3R 19689906 19689962 15 128 9.0 8.0 8.5 1.6 189 chr3R 19689773 intron Naam + chr3R 19689868 intron Naam + chr3R 19689962 intron Naam + chr3R_15_19685001 chr3R_19685001 RAL-373_125b 2893 chr3R 19702284 19702346 chr3R 19702409 19702478 5 129 16.0 13.0 14.5 0.3 194 chr3R 19702284 intergenic not near genes chr3R 19702381 intergenic not near genes chr3R 19702478 intergenic not near genes chr3R_5_19700001 chr3R_19700001 RAL-373_125b 2894 chr3R 19718836 19718871 chr3R 19719011 19719046 7 174 10.0 14.0 12.0 0.5 210 chr3R 19718836 intergenic not near genes chr3R 19718941 intergenic not near genes chr3R 19719046 intergenic not near genes chr3R_7_19715001 chr3R_19715001 RAL-373_125b 2895 chr3R 19738064 19738103 chr3R 19738222 19738265 8 156 12.0 9.5 10.8 0.7 201 chr3R 19738064 intron GluClalpha + chr3R 19738164 intron GluClalpha + chr3R 19738265 intron GluClalpha + chr3R_8_19735001 chr3R_19735001 RAL-373_125b 2896 chr3R 19755395 19755456 chr3R 19755523 19755601 7 139 7.0 10.0 8.5 0.7 206 chr3R 19755395 intron GluClalpha + chr3R 19755498 intron GluClalpha + chr3R 19755601 intron GluClalpha + chr3R_7_19755001 chr3R_19755001 RAL-373_125b 2897 chr3R 19763873 19763950 chr3R 19764011 19764088 5 137 6.5 7.5 7.0 0.6 215 chr3R 19763873 intron GluClalpha + chr3R 19763980 intron GluClalpha + chr3R 19764088 intron GluClalpha + chr3R_5_19760001 chr3R_19760001 RAL-373_125b 2898 chr3R 19800638 19800708 chr3R 19800765 19800835 5 119 7.5 10.5 9.0 0.5 197 chr3R 19800638 intron bnl - chr3R 19800736 intron bnl - chr3R 19800835 intron bnl - chr3R_5_19800001 chr3R_19800001 RAL-373_125b 2899 chr3R 19827507 19827549 chr3R 19827643 19827685 6 135 14.5 16.5 15.5 0.4 178 chr3R 19827507 intron bnl - chr3R 19827596 intron bnl - chr3R 19827685 exon bnl - chr3R_6_19825001 chr3R_19825001 RAL-373_125b 2900 chr3R 19830837 19830873 chr3R 19830964 19831000 4 127 6.0 7.0 6.5 0.5 163 chr3R 19830837 intron bnl - chr3R 19830918 intron bnl - chr3R 19831000 intron bnl - chr3R_4_19830001 chr3R_19830001 RAL-373_125b 2901 chr3R 19859486 19859548 chr3R 19859612 19859668 12 121 17.0 19.0 18.0 0.6 182 chr3R 19859486 intron Ire1 - chr3R 19859577 intron Ire1 - chr3R 19859668 intron Ire1 - chr3R_12_19855001 chr3R_19855001 RAL-373_125b 2902 chr3R 19940816 19940879 chr3R 19940941 19941007 12 126 17.0 14.5 15.8 0.7 191 chr3R 19940816 intron Hs6st - chr3R 19940912 intron Hs6st - chr3R 19941007 intron Hs6st - chr3R_12_19940001 chr3R_19940001 RAL-373_125b 2903 chr3R 19953912 19953966 chr3R 19954029 19954087 9 121 16.0 16.0 16.0 0.5 175 chr3R 19953912 intron Hs6st - chr3R 19954000 intron Hs6st - chr3R 19954087 intron Hs6st - chr3R_9_19950001 chr3R_19950001 RAL-373_125b 2904 chr3R 20008783 20008846 chr3R 20008914 20008970 8 127 13.5 16.0 14.8 0.5 187 chr3R 20008783 intergenic MED25 +,Hs6st - chr3R 20008876 intergenic MED25 +,Hs6st - chr3R 20008970 5` UTR MED25 + chr3R_8_20005001 chr3R_20005001 RAL-373_125b 2905 chr3R 20059435 20059487 chr3R 20059564 20059617 18 126 4.5 8.5 6.5 2.4 182 chr3R 20059435 intron CG4390 - chr3R 20059526 intron CG4390 - chr3R 20059617 exon CG4390 - chr3R_18_20055001 chr3R_20055001 RAL-373_125b 2906 chr3R 20076992 20077043 chr3R 20077128 20077171 6 131 15.5 16.0 15.8 0.4 179 chr3R 20076992 intergenic not near genes chr3R 20077082 intergenic not near genes chr3R 20077171 intergenic not near genes chr3R_6_20075001 chr3R_20075001 RAL-373_125b 2907 chr3R 20093712 20093734 chr3R 20093817 20093840 8 116 12.5 18.0 15.2 0.5 128 chr3R 20093712 intergenic not near genes chr3R 20093776 intergenic not near genes chr3R 20093840 intergenic not near genes chr3R_8_20090001 chr3R_20090001 RAL-373_125b 2908 chr3R 20097726 20097731 chr3R 20097852 20097859 4 127 9.0 16.5 12.8 0.3 133 chr3R 20097726 intergenic not near genes chr3R 20097792 intergenic not near genes chr3R 20097859 intergenic not near genes chr3R_4_20095001 chr3R_20095001 RAL-373_125b 2909 chr3R 20105311 20105314 chr3R 20106069 20106100 5 768 22.5 20.5 21.5 0.2 789 chr3R 20105311 intergenic not near genes chr3R 20105706 intergenic not near genes chr3R 20106100 intergenic not near genes chr3R_5_20105001 chr3R_20105001 RAL-373_125b 2910 chr3R 20109500 20109560 chr3R 20114751 20114816 copia 17 5255 5.5 6.5 6.0 2.4 5316 chr3R 20109500 intergenic not near genes chr3R 20112158 intergenic not near genes chr3R 20114816 intergenic CG10887 + chr3R_17_20110001 chr3R_20110001 RAL-373_125b 2911 chr3R 20147494 20147544 chr3R 20147913 20147962 4 422 18.0 11.0 14.5 0.3 468 chr3R 20147494 intergenic not near genes chr3R 20147728 intergenic not near genes chr3R 20147962 intergenic not near genes chr3R_4_20145001 chr3R_20145001 RAL-373_125b 2912 chr3R 20156669 20156697 chr3R 20165873 20165917 roo 9 9217 8.5 8.0 8.2 1.0 9248 chr3R 20156669 intergenic not near genes chr3R 20161293 intergenic not near genes chr3R 20165917 intergenic not near genes chr3R_9_20160001 chr3R_20160001 RAL-373_125b 2913 chr3R 20203911 20203930 chr3R 20204042 20204055 4 130 10.0 12.0 11.0 0.3 144 chr3R 20203911 intergenic not near genes chr3R 20203983 intergenic not near genes chr3R 20204055 intergenic not near genes chr3R_4_20200001 chr3R_20200001 RAL-373_125b 2914 chr3R 20205524 20205588 chr3R 20205691 20205760 8 170 19.0 13.5 16.2 0.5 236 chr3R 20205524 intron Nlg4 + chr3R 20205642 intron Nlg4 + chr3R 20205760 intron Nlg4 + chr3R_8_20205001 chr3R_20205001 RAL-373_125b 2915 chr3R 20239423 20239459 chr3R 20239558 20239584 4 130 15.5 19.5 17.5 0.2 161 chr3R 20239423 intron Nlg4 + chr3R 20239504 intron Nlg4 + chr3R 20239584 intron Nlg4 + chr3R_4_20235001 chr3R_20235001 RAL-373_125b 2916 chr3R 20243084 20243128 chr3R 20243212 20243233 8 123 18.5 15.0 16.8 0.4 149 chr3R 20243084 intron Nlg4 + chr3R 20243158 intron Nlg4 + chr3R 20243233 intron Nlg4 + chr3R_8_20240001 chr3R_20240001 RAL-373_125b 2917 chr3R 20245225 20245300 chr3R 20248887 20248955 F-element 12 3659 5.0 0.0 2.5 3.4 3730 chr3R 20245225 3` UTR Nlg4 + chr3R 20247090 intergenic not near genes chr3R 20248955 intergenic not near genes chr3R_12_20245001 chr3R_20245001 RAL-373_125b 2918 chr3R 20251706 20251744 chr3R 20251968 20252000 6 260 17.0 14.5 15.8 0.4 294 chr3R 20251706 intergenic not near genes chr3R 20251853 intergenic not near genes chr3R 20252000 intergenic not near genes chr3R_6_20250001 chr3R_20250001 RAL-373_125b 2919 chr3R 20258615 20258682 chr3R 20258749 20258802 6 127 12.5 11.5 12.0 0.5 187 chr3R 20258615 intron cic + chr3R 20258708 intron cic + chr3R 20258802 intron cic + chr3R_6_20255001 chr3R_20255001 RAL-373_125b 2920 chr3R 20266482 20266538 chr3R 20272987 20273024 Burdock 13 6517 9.0 5.0 7.0 1.6 6542 chr3R 20266482 intron cic + chr3R 20269753 intron cic + chr3R 20273024 intron cic + chr3R_13_20265001 chr3R_20265001 RAL-373_125b 2921 chr3R 20276421 20276461 chr3R 20276545 20276596 7 128 17.0 16.5 16.8 0.4 175 chr3R 20276421 intron cic + chr3R 20276508 intron cic + chr3R 20276596 intron cic + chr3R_7_20275001 chr3R_20275001 RAL-373_125b 2922 chr3R 20280009 20280069 chr3R 20280228 20280271 7 215 19.0 21.0 20.0 0.3 262 chr3R 20280009 intron cic + chr3R 20280140 intron cic + chr3R 20280271 intron cic + chr3R_7_20280001 chr3R_20280001 RAL-373_125b 2923 chr3R 20282225 20282280 chr3R 20282351 20282406 6 125 12.0 15.0 13.5 0.4 181 chr3R 20282225 intron cic + chr3R 20282316 intron cic + chr3R 20282406 intron cic + chr3R_6_20280001 chr3R_20280001 RAL-373_125b 2924 chr3R 20330957 20331025 chr3R 20331493 20331561 roo 17 536 4.0 4.5 4.2 3.3 604 chr3R 20330957 intergenic Sirt2 + chr3R 20331259 intergenic Sirt2 + chr3R 20331561 intergenic not near genes chr3R_17_20330001 chr3R_20330001 RAL-373_125b 2925 chr3R 20345332 20345394 chr3R 20345471 20345533 4 139 3.5 9.0 6.2 0.6 201 chr3R 20345332 intergenic not near genes chr3R 20345432 intergenic not near genes chr3R 20345533 intergenic not near genes chr3R_4_20345001 chr3R_20345001 RAL-373_125b 2926 chr3R 20363083 20363129 chr3R 20363199 20363261 6 129 8.0 9.0 8.5 0.6 178 chr3R 20363083 intergenic not near genes chr3R 20363172 intergenic not near genes chr3R 20363261 intergenic not near genes chr3R_6_20360001 chr3R_20360001 RAL-373_125b 2927 chr3R 20370629 20370660 chr3R 20370972 20371007 7 338 16.5 12.0 14.2 0.5 378 chr3R 20370629 intergenic not near genes chr3R 20370818 intergenic not near genes chr3R 20371007 intergenic not near genes chr3R_7_20370001 chr3R_20370001 RAL-373_125b 2928 chr3R 20375821 20375867 chr3R 20375962 20375997 5 137 17.5 16.0 16.8 0.3 176 chr3R 20375821 intergenic not near genes chr3R 20375909 intergenic not near genes chr3R 20375997 intergenic not near genes chr3R_5_20375001 chr3R_20375001 RAL-373_125b 2929 chr3R 20386379 20386427 chr3R 20386498 20386550 5 125 8.5 7.5 8.0 0.6 171 chr3R 20386379 intron Gfrl - chr3R 20386464 intron Gfrl - chr3R 20386550 intron Gfrl - chr3R_5_20385001 chr3R_20385001 RAL-373_125b 2930 chr3R 20389451 20389492 chr3R 20389587 20389620 5 133 14.0 15.0 14.5 0.3 169 chr3R 20389451 intron Gfrl - chr3R 20389536 intron Gfrl - chr3R 20389620 intron Gfrl - chr3R_5_20385001 chr3R_20385001 RAL-373_125b 2931 chr3R 20391741 20391770 chr3R 20391887 20391916 4 144 14.5 10.5 12.5 0.3 175 chr3R 20391741 intron Gfrl - chr3R 20391828 intron Gfrl - chr3R 20391916 intron Gfrl - chr3R_4_20390001 chr3R_20390001 RAL-373_125b 2932 chr3R 20411185 20411241 chr3R 20411438 20411506 16 262 15.5 13.5 14.5 1.0 321 chr3R 20411185 exon Gfrl - chr3R 20411346 intron Gfrl - chr3R 20411506 intron Gfrl - chr3R_16_20410001 chr3R_20410001 RAL-373_125b 2933 chr3R 20441085 20441136 chr3R 20441282 20441333 10 197 18.5 17.5 18.0 0.5 248 chr3R 20441085 intron Gfrl - chr3R 20441209 intron Gfrl - chr3R 20441333 intron Gfrl - chr3R_10_20440001 chr3R_20440001 RAL-373_125b 2934 chr3R 20469434 20469462 chr3R 20469564 20469595 5 130 5.5 2.5 4.0 1.0 161 chr3R 20469434 intron Gfrl - chr3R 20469514 intron Gfrl - chr3R 20469595 intron Gfrl - chr3R_5_20465001 chr3R_20465001 RAL-373_125b 2935 chr3R 20482413 20482452 chr3R 20482517 20482556 6 124 13.0 17.5 15.2 0.4 143 chr3R 20482413 intron Gfrl - chr3R 20482484 intron Gfrl - chr3R 20482556 intron Gfrl - chr3R_6_20480001 chr3R_20480001 RAL-373_125b 2936 chr3R 20498516 20498549 chr3R 20498659 20498692 5 142 14.5 12.5 13.5 0.3 176 chr3R 20498516 intergenic not near genes chr3R 20498604 intergenic not near genes chr3R 20498692 intergenic not near genes chr3R_5_20495001 chr3R_20495001 RAL-373_125b 2937 chr3R 20506523 20506608 chr3R 20507387 20507459 BS 13 850 4.0 9.5 6.8 1.7 936 chr3R 20506523 intergenic Or92a + chr3R 20506991 intergenic CG4288 - chr3R 20507459 3` UTR CG4288 - chr3R_13_20505001 chr3R_20505001 RAL-373_125b 2938 chr3R 20512963 20513014 chr3R 20515715 20515767 opus 10 2752 4.0 2.0 3.0 2.5 2804 chr3R 20512963 intergenic CG4288 - chr3R 20514365 intergenic not near genes chr3R 20515767 intergenic not near genes chr3R_10_20510001 chr3R_20510001 RAL-373_125b 2939 chr3R 20518408 20518477 chr3R 20518547 20518615 11 139 14.5 15.5 15.0 0.7 207 chr3R 20518408 intergenic not near genes chr3R 20518512 intergenic not near genes chr3R 20518615 intergenic not near genes chr3R_11_20515001 chr3R_20515001 RAL-373_125b 2940 chr3R 20549385 20549407 chr3R 20549523 20549552 7 145 22.0 15.5 18.8 0.4 167 chr3R 20549385 intron Stat92E - chr3R 20549468 intron Stat92E - chr3R 20549552 intron Stat92E - chr3R_7_20545001 chr3R_20545001 RAL-373_125b 2941 chr3R 20567876 20567934 chr3R 20568046 20568090 5 164 13.0 15.5 14.2 0.3 214 chr3R 20567876 intron CG5191 + chr3R 20567983 intron CG5191 + chr3R 20568090 intron CG5191 + chr3R_5_20565001 chr3R_20565001 RAL-373_125b 2942 chr3R 20572576 20572604 chr3R 20572691 20572745 4 137 23.5 21.5 22.5 0.2 169 chr3R 20572576 3` UTR CG5191 + chr3R 20572660 3` UTR CG5191 + chr3R 20572745 3` UTR CG5191 + chr3R_4_20570001 chr3R_20570001 RAL-373_125b 2943 chr3R 20574054 20574113 chr3R 20574250 20574312 8 188 21.5 15.5 18.5 0.4 258 chr3R 20574054 intergenic not near genes chr3R 20574183 intergenic not near genes chr3R 20574312 intergenic not near genes chr3R_8_20570001 chr3R_20570001 RAL-373_125b 2944 chr3R 20594439 20594507 chr3R 20594579 20594651 4 140 12.0 10.5 11.2 0.3 212 chr3R 20594439 intron bon + chr3R 20594545 intron bon + chr3R 20594651 intron bon + chr3R_4_20590001 chr3R_20590001 RAL-373_125b 2945 chr3R 20596148 20596209 chr3R 20596288 20596346 11 137 3.5 8.0 5.8 1.6 198 chr3R 20596148 intron bon + chr3R 20596247 intron bon + chr3R 20596346 intron bon + chr3R_11_20595001 chr3R_20595001 RAL-373_125b 2946 chr3R 20612567 20612642 chr3R 20612705 20612770 7 133 13.0 16.5 14.8 0.4 203 chr3R 20612567 3` UTR CG15923 - chr3R 20612668 exon CG15923 - chr3R 20612770 exon CG15923 - chr3R_7_20610001 chr3R_20610001 RAL-373_125b 2947 chr3R 20657291 20657346 chr3R 20657486 20657541 7 194 11.0 13.5 12.2 0.5 250 chr3R 20657291 intron Nep4 - chr3R 20657416 intron Nep4 - chr3R 20657541 intron Nep4 - chr3R_7_20655001 chr3R_20655001 RAL-373_125b 2948 chr3R 20684175 20684227 chr3R 20684309 20684350 9 132 12.0 11.0 11.5 0.7 175 chr3R 20684175 intergenic not near genes chr3R 20684262 intergenic not near genes chr3R 20684350 intergenic not near genes chr3R_9_20680001 chr3R_20680001 RAL-373_125b 2949 chr3R 20696428 20696488 chr3R 20696560 20696610 12 123 14.5 17.0 15.8 0.7 182 chr3R 20696428 intron Oamb - chr3R 20696519 intron Oamb - chr3R 20696610 intron Oamb - chr3R_12_20695001 chr3R_20695001 RAL-373_125b 2950 chr3R 20703462 20703505 chr3R 20703891 20703944 4 437 12.5 13.5 13.0 0.3 482 chr3R 20703462 intron Oamb - chr3R 20703703 intron Oamb - chr3R 20703944 intron Oamb - chr3R_4_20700001 chr3R_20700001 RAL-373_125b 2951 chr3R 20707708 20707771 chr3R 20707971 20708036 7 265 15.0 13.0 14.0 0.5 328 chr3R 20707708 intron Oamb - chr3R 20707872 intron Oamb - chr3R 20708036 intron Oamb - chr3R_7_20705001 chr3R_20705001 RAL-373_125b 2952 chr3R 20708715 20708776 chr3R 20708842 20708911 9 132 14.0 14.5 14.2 0.6 196 chr3R 20708715 intron Oamb - chr3R 20708813 intron Oamb - chr3R 20708911 intron Oamb - chr3R_9_20705001 chr3R_20705001 RAL-373_125b 2953 chr3R 20717048 20717111 chr3R 20717181 20717231 6 113 5.5 2.5 4.0 1.2 183 chr3R 20717048 intergenic not near genes chr3R 20717140 intergenic not near genes chr3R 20717231 intergenic not near genes chr3R_6_20715001 chr3R_20715001 RAL-373_125b 2954 chr3R 20730893 20730957 chr3R 20731034 20731115 10 144 8.5 2.0 5.2 1.6 222 chr3R 20730893 intergenic not near genes chr3R 20731004 intergenic not near genes chr3R 20731115 intergenic not near genes chr3R_10_20730001 chr3R_20730001 RAL-373_125b 2955 chr3R 20733717 20733783 chr3R 20733859 20733925 11 139 14.5 14.5 14.5 0.7 208 chr3R 20733717 intergenic not near genes chr3R 20733821 intergenic not near genes chr3R 20733925 intergenic not near genes chr3R_11_20730001 chr3R_20730001 RAL-373_125b 2956 chr3R 20734193 20734201 chr3R 20734434 20734437 4 240 2.0 2.0 2.0 1.3 244 chr3R 20734193 intergenic not near genes chr3R 20734315 intergenic not near genes chr3R 20734437 intergenic not near genes chr3R_4_20730001 chr3R_20730001 RAL-373_125b 2957 chr3R 20734989 20735033 chr3R 20735109 20735159 11 123 4.5 4.5 4.5 2.0 170 chr3R 20734989 intergenic not near genes chr3R 20735074 intergenic not near genes chr3R 20735159 intergenic cdc2c + chr3R_11_20735001 chr3R_20735001 RAL-373_125b 2958 chr3R 20776131 20776191 chr3R 20776264 20776334 7 139 8.0 7.5 7.8 0.8 203 chr3R 20776131 intron Syp + chr3R 20776232 intron Syp + chr3R 20776334 intron Syp + chr3R_7_20775001 chr3R_20775001 RAL-373_125b 2959 chr3R 20787395 20787450 chr3R 20787535 20787586 10 140 18.5 20.5 19.5 0.5 191 chr3R 20787395 intron Syp + chr3R 20787490 intron Syp + chr3R 20787586 intron Syp + chr3R_10_20785001 chr3R_20785001 RAL-373_125b 2960 chr3R 20801110 20801148 chr3R 20801227 20801275 5 125 16.0 13.5 14.8 0.3 165 chr3R 20801110 intron Syp + chr3R 20801192 intron Syp + chr3R 20801275 intron Syp + chr3R_5_20800001 chr3R_20800001 RAL-373_125b 2961 chr3R 20806930 20806979 chr3R 20807100 20807144 10 168 10.0 13.5 11.8 0.8 214 chr3R 20806930 3` UTR Syp + chr3R 20807037 3` UTR Syp + chr3R 20807144 3` UTR Syp + chr3R_10_20805001 chr3R_20805001 RAL-373_125b 2962 chr3R 20826974 20827037 chr3R 20827104 20827170 6 124 15.5 15.5 15.5 0.4 196 chr3R 20826974 intron AdSS - chr3R 20827072 intron AdSS - chr3R 20827170 intron,5` UTR AdSS -,CR44047 + chr3R_6_20825001 chr3R_20825001 RAL-373_125b 2963 chr3R 20850049 20850082 chr3R 20850184 20850217 4 134 9.5 8.5 9.0 0.4 168 chr3R 20850049 intergenic RpS30 + chr3R 20850133 intergenic RpS30 + chr3R 20850217 intergenic RpS30 + chr3R_4_20850001 chr3R_20850001 RAL-373_125b 2964 chr3R 20854445 20854508 chr3R 20859285 20859309 Doc 15 4832 2.5 8.5 5.5 2.3 4864 chr3R 20854445 intron Ir93a - chr3R 20856877 intron Ir93a - chr3R 20859309 exon Ir93a - chr3R_15_20855001 chr3R_20855001 RAL-373_125b 2965 chr3R 20870205 20870260 chr3R 20870336 20870388 8 127 13.0 12.0 12.5 0.6 183 chr3R 20870205 intergenic not near genes chr3R 20870296 intergenic not near genes chr3R 20870388 intergenic not near genes chr3R_8_20870001 chr3R_20870001 RAL-373_125b 2966 chr3R 20900500 20900552 chr3R 20900631 20900683 4 131 17.5 15.5 16.5 0.2 183 chr3R 20900500 intergenic not near genes chr3R 20900592 intergenic not near genes chr3R 20900683 intergenic not near genes chr3R_4_20900001 chr3R_20900001 RAL-373_125b 2967 chr3R 20931407 20931466 chr3R 20931579 20931638 10 163 12.5 13.0 12.8 0.7 231 chr3R 20931407 intron CG31191 - chr3R 20931522 intron CG31191 - chr3R 20931638 intron CG31191 - chr3R_10_20930001 chr3R_20930001 RAL-373_125b 2968 chr3R 20950262 20950327 chr3R 20950419 20950485 10 161 8.5 10.5 9.5 1.0 223 chr3R 20950262 intron Atpalpha + chr3R 20950374 intron Atpalpha + chr3R 20950485 intron Atpalpha + chr3R_10_20950001 chr3R_20950001 RAL-373_125b 2969 chr3R 20997954 20998018 chr3R 20998093 20998152 6 136 9.5 15.0 12.2 0.5 198 chr3R 20997954 intron Calx + chr3R 20998053 intron Calx + chr3R 20998152 intron Calx + chr3R_6_20995001 chr3R_20995001 RAL-373_125b 2970 chr3R 21076265 21076335 chr3R 21076397 21076464 8 126 13.0 13.5 13.2 0.6 199 chr3R 21076265 exon dmrt93B + chr3R 21076364 intron dmrt93B + chr3R 21076464 intron dmrt93B + chr3R_8_21075001 chr3R_21075001 RAL-373_125b 2971 chr3R 21129818 21129958 chr3R 21129946 21130103 5 135 8.0 6.0 7.0 0.6 285 chr3R 21129818 intergenic Obp93a -,CG5793 +,Ice2 + chr3R 21129960 intergenic Obp93a -,Ice2 +,CG5793 + chr3R 21130103 intergenic Ice2 +,Obp93a - chr3R_5_21125001 chr3R_21125001 RAL-373_125b 2972 chr3R 21132620 21132628 chr3R 21132748 21132761 5 132 14.0 7.5 10.8 0.4 141 chr3R 21132620 3` UTR Ice2 + chr3R 21132690 3` UTR Ice2 + chr3R 21132761 exon CG7009 - chr3R_5_21130001 chr3R_21130001 RAL-373_125b 2973 chr3R 21141650 21141692 chr3R 21150169 21150209 Tirant 5 8516 8.0 7.0 7.5 0.6 8559 chr3R 21141650 intron SNF4Agamma + chr3R 21145930 intron SNF4Agamma + chr3R 21150209 intron SNF4Agamma + chr3R_5_21145001 chr3R_21145001 RAL-373_125b 2974 chr3R 21159083 21159130 chr3R 21159236 21159277 6 152 11.0 8.0 9.5 0.6 194 chr3R 21159083 intron SNF4Agamma + chr3R 21159180 intron SNF4Agamma + chr3R 21159277 intron,3` UTR SNF4Agamma +,CG10824 - chr3R_6_21155001 chr3R_21155001 RAL-373_125b 2975 chr3R 21210092 21210156 chr3R 21210203 21210282 10 115 11.0 10.5 10.8 0.8 190 chr3R 21210092 intron SNF4Agamma + chr3R 21210187 intron SNF4Agamma + chr3R 21210282 intron SNF4Agamma + chr3R_10_21210001 chr3R_21210001 RAL-373_125b 2976 chr3R 21214644 21214661 chr3R 21214914 21214946 4 280 10.5 18.5 14.5 0.3 302 chr3R 21214644 intergenic CG5862 + chr3R 21214795 intergenic CG5862 + chr3R 21214946 intergenic CG5862 + chr3R_4_21210001 chr3R_21210001 RAL-373_125b 2977 chr3R 21245806 21245860 chr3R 21245940 21245994 15 133 4.5 6.5 5.5 2.3 188 chr3R 21245806 intergenic CG5892 + chr3R 21245900 intergenic CG5892 + chr3R 21245994 intergenic not near genes chr3R_15_21245001 chr3R_21245001 RAL-373_125b 2978 chr3R 21274327 21274610 chr3R 21274471 21274742 12 138 21.0 20.5 20.8 0.6 415 chr3R 21274327 3` UTR CG3301 - chr3R 21274534 3` UTR CG3301 - chr3R 21274742 intron CG3301 - chr3R_12_21270001 chr3R_21270001 RAL-373_125b 2979 chr3R 21311006 21311077 chr3R 21314558 21314831 6 3623 17.5 2.5 10.0 0.5 3825 chr3R 21311006 5` UTR Hsromega + chr3R 21312918 5` UTR Hsromega + chr3R 21314831 5` UTR Hsromega + chr3R_6_21310001 chr3R_21310001 RAL-373_125b 2980 chr3R 21314894 21314969 chr3R 21315030 21315105 6 134 13.0 10.0 11.5 0.5 211 chr3R 21314894 5` UTR Hsromega + chr3R 21315000 5` UTR Hsromega + chr3R 21315105 5` UTR Hsromega + chr3R_6_21310001 chr3R_21310001 RAL-373_125b 2981 chr3R 21322928 21322983 chr3R 21323057 21323077 4 112 12.0 7.0 9.5 0.4 149 chr3R 21322928 exon CG16791 - chr3R 21323002 intron CG16791 - chr3R 21323077 intron CG16791 - chr3R_4_21320001 chr3R_21320001 RAL-373_125b 2982 chr3R 21343056 21343071 chr3R 21343167 21343197 6 126 10.0 18.5 14.2 0.4 141 chr3R 21343056 intron CG16791 - chr3R 21343126 intron CG16791 - chr3R 21343197 intron CG16791 - chr3R_6_21340001 chr3R_21340001 RAL-373_125b 2983 chr3R 21343777 21343832 chr3R 21343920 21343975 5 140 16.0 17.5 16.8 0.3 198 chr3R 21343777 intron CG16791 - chr3R 21343876 intron CG16791 - chr3R 21343975 intron CG16791 - chr3R_5_21340001 chr3R_21340001 RAL-373_125b 2984 chr3R 21383270 21383301 chr3R 21383386 21383404 11 123 0.5 6.5 3.5 2.4 134 chr3R 21383270 intergenic not near genes chr3R 21383337 intergenic not near genes chr3R 21383404 intergenic not near genes chr3R_11_21380001 chr3R_21380001 RAL-373_125b 2985 chr3R 21385666 21385952 chr3R 21385782 21386074 17 122 6.0 0.0 3.0 4.2 408 chr3R 21385666 intergenic not near genes chr3R 21385870 intergenic not near genes chr3R 21386074 intergenic not near genes chr3R_17_21385001 chr3R_21385001 RAL-373_125b 2986 chr3R 21390392 21390417 chr3R 21390525 21390551 7 133 21.5 11.5 16.5 0.4 159 chr3R 21390392 3` UTR bap + chr3R 21390472 intergenic bap + chr3R 21390551 intergenic bap + chr3R_7_21390001 chr3R_21390001 RAL-373_125b 2987 chr3R 21408818 21408864 chr3R 21408947 21408993 6 129 13.0 18.0 15.5 0.4 175 chr3R 21408818 intergenic CheB93b +,CheB93a + chr3R 21408906 intergenic CheB93b + chr3R 21408993 intergenic CheB93b + chr3R_6_21405001 chr3R_21405001 RAL-373_125b 2988 chr3R 21422842 21422908 chr3R 21423027 21423093 4 186 5.0 1.5 3.2 1.0 251 chr3R 21422842 intron lbl - chr3R 21422968 intron lbl - chr3R 21423093 intron lbl - chr3R_4_21420001 chr3R_21420001 RAL-373_125b 2989 chr3R 21441337 21441400 chr3R 21441470 21441537 4 132 9.5 14.0 11.8 0.3 200 chr3R 21441337 intergenic lbe - chr3R 21441437 intergenic lbe - chr3R 21441537 intergenic lbe - chr3R_4_21440001 chr3R_21440001 RAL-373_125b 2990 chr3R 21471984 21472030 chr3R 21472115 21472151 15 128 4.5 8.5 6.5 2.0 167 chr3R 21471984 intergenic not near genes chr3R 21472068 intergenic not near genes chr3R 21472151 intergenic not near genes chr3R_15_21470001 chr3R_21470001 RAL-373_125b 2991 chr3R 21472227 21472286 chr3R 21472456 21472496 10 227 17.5 17.0 17.2 0.5 269 chr3R 21472227 intergenic not near genes chr3R 21472362 intergenic not near genes chr3R 21472496 intergenic not near genes chr3R_10_21470001 chr3R_21470001 RAL-373_125b 2992 chr3R 21479022 21479035 chr3R 21479367 21479376 4 347 8.5 4.0 6.2 0.6 354 chr3R 21479022 intergenic not near genes chr3R 21479199 intergenic not near genes chr3R 21479376 intergenic not near genes chr3R_4_21475001 chr3R_21475001 RAL-373_125b 2993 chr3R 21520098 21520113 chr3R 21520242 21520256 4 144 13.5 12.0 12.8 0.3 158 chr3R 21520098 intergenic not near genes chr3R 21520177 intergenic not near genes chr3R 21520256 intergenic not near genes chr3R_4_21520001 chr3R_21520001 RAL-373_125b 2994 chr3R 21540190 21540264 chr3R 21540445 21540509 8 251 3.5 6.5 5.0 1.3 319 chr3R 21540190 intergenic not near genes chr3R 21540350 intergenic not near genes chr3R 21540509 intergenic not near genes chr3R_8_21540001 chr3R_21540001 RAL-373_125b 2995 chr3R 21545576 21545623 chr3R 21545686 21545745 7 119 8.0 6.0 7.0 0.9 169 chr3R 21545576 intergenic not near genes chr3R 21545660 intergenic not near genes chr3R 21545745 intergenic not near genes chr3R_7_21545001 chr3R_21545001 RAL-373_125b 2996 chr3R 21624054 21624113 chr3R 21624198 21624257 7 142 4.0 4.0 4.0 1.4 203 chr3R 21624054 exon E2f - chr3R 21624156 intron E2f - chr3R 21624257 intron E2f - chr3R_7_21620001 chr3R_21620001 RAL-373_125b 2997 chr3R 21659571 21659601 chr3R 21659706 21659741 5 139 15.0 18.5 16.8 0.3 170 chr3R 21659571 intron E2f - chr3R 21659656 intron E2f - chr3R 21659741 intron E2f - chr3R_5_21655001 chr3R_21655001 RAL-373_125b 2998 chr3R 21699580 21699622 chr3R 21699689 21699743 7 118 9.5 5.0 7.2 0.9 163 chr3R 21699580 intron CG31176 - chr3R 21699662 intron CG31176 - chr3R 21699743 intron CG31176 - chr3R_7_21695001 chr3R_21695001 RAL-373_125b 2999 chr3R 21761091 21761152 chr3R 21768517 21768594 mdg1 15 7432 6.5 5.5 6.0 2.1 7503 chr3R 21761091 exon CG42335 + chr3R 21764842 intron CG42335 + chr3R 21768594 exon CG42335 + chr3R_15_21760001 chr3R_21760001 RAL-373_125b 3000 chr3R 21784813 21784860 chr3R 21784937 21784989 4 128 15.0 17.0 16.0 0.2 176 chr3R 21784813 3` UTR,3` UTR CASK -,CRG - chr3R 21784901 3` UTR,3` UTR CASK -,CRG - chr3R 21784989 3` UTR,3` UTR CASK -,CRG - chr3R_4_21780001 chr3R_21780001 RAL-373_125b 3001 chr3R 21815056 21815081 chr3R 21815183 21815188 5 120 10.5 15.5 13.0 0.4 132 chr3R 21815056 intron CASK - chr3R 21815122 intron CASK - chr3R 21815188 intron CASK - chr3R_5_21815001 chr3R_21815001 RAL-373_125b 3002 chr3R 21820162 21820201 chr3R 21820291 21820330 9 128 9.0 6.5 7.8 1.0 168 chr3R 21820162 intron CASK - chr3R 21820246 intron CASK - chr3R 21820330 intron CASK - chr3R_9_21820001 chr3R_21820001 RAL-373_125b 3003 chr3R 21903600 21903629 chr3R 21903737 21903772 7 141 7.0 14.5 10.8 0.6 172 chr3R 21903600 intron CG6678 + chr3R 21903686 intron CG6678 + chr3R 21903772 intron CG6678 + chr3R_7_21900001 chr3R_21900001 RAL-373_125b 3004 chr3R 21907534 21907534 chr3R 28831798 28831802 20 6924267 27.5 22.0 24.8 0.8 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_20_25365001 chr3R_25365001 RAL-373_125b 3005 chr3R 8339246 8339247 chr3R 21907535 21907535 6 13568288 25.5 23.5 24.5 0.2 13568289 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907535 intergenic CG6678 + chr3R_6_15120001 chr3R_15120001 RAL-373_125b 3006 chr3R 21907535 21907535 chr3R 28831801 28831802 42 6924266 27.5 21.5 24.5 1.6 6924267 chr3R 21907535 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_42_25365001 chr3R_25365001 RAL-373_125b 3007 chr3R 9620956 9620957 chr3R 21907536 21907536 5 12286580 21.0 23.5 22.2 0.2 12286580 chr3R 9620956 intron CG8312 + chr3R 15764246 intergenic not near genes chr3R 21907536 intergenic CG6678 + chr3R_5_15760001 chr3R_15760001 RAL-373_125b 3008 chr3R 21907536 21907536 chr3R 28831799 28831802 45 6924266 26.0 22.0 24.0 1.8 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_45_25365001 chr3R_25365001 RAL-373_125b 3009 chr3R 21937183 21937229 chr3R 21937310 21937356 7 125 3.5 3.0 3.2 1.7 173 chr3R 21937183 intergenic not near genes chr3R 21937270 intergenic not near genes chr3R 21937356 intergenic not near genes chr3R_7_21935001 chr3R_21935001 RAL-373_125b 3010 chr3R 21947347 21947365 chr3R 21947449 21947493 4 118 12.0 11.5 11.8 0.3 146 chr3R 21947347 intergenic not near genes chr3R 21947420 intergenic not near genes chr3R 21947493 intergenic not near genes chr3R_4_21945001 chr3R_21945001 RAL-373_125b 3011 chr3R 22099635 22099685 chr3R 22099805 22099845 7 166 12.5 18.5 15.5 0.4 210 chr3R 22099635 intron CG5778 - chr3R 22099740 intron CG5778 - chr3R 22099845 intron CG5778 - chr3R_7_22095001 chr3R_22095001 RAL-373_125b 3012 chr3R 22108330 22108384 chr3R 22108594 22108654 7 268 21.0 17.5 19.2 0.3 324 chr3R 22108330 intron CG5778 - chr3R 22108492 intron CG5778 - chr3R 22108654 intron CG5778 - chr3R_7_22105001 chr3R_22105001 RAL-373_125b 3013 chr3R 22117378 22117437 chr3R 22117504 22117563 14 125 5.0 12.0 8.5 1.5 185 chr3R 22117378 intergenic Ir94b -,Ir94c - chr3R 22117470 intergenic Ir94c -,Ir94b - chr3R 22117563 intergenic Ir94c -,Ir94b - chr3R_14_22115001 chr3R_22115001 RAL-373_125b 3014 chr3R 22198100 22198145 chr3R 22198212 22198267 5 119 13.0 12.0 12.5 0.4 167 chr3R 22198100 intron,intron SKIP +,CR45224 - chr3R 22198184 intron,intron SKIP +,CR45224 - chr3R 22198267 intron,intron SKIP +,CR45224 - chr3R_5_22195001 chr3R_22195001 RAL-373_125b 3015 chr3R 22234044 22234095 chr3R 22234171 22234222 15 124 4.5 8.5 6.5 2.0 178 chr3R 22234044 intron SKIP + chr3R 22234133 intron SKIP + chr3R 22234222 intron SKIP + chr3R_15_22230001 chr3R_22230001 RAL-373_125b 3016 chr3R 22234638 22234711 chr3R 22236007 22236080 pogo 25 1366 5.5 3.0 4.2 4.8 1442 chr3R 22234638 intron SKIP + chr3R 22235359 intron SKIP + chr3R 22236080 intron SKIP + chr3R_25_22235001 chr3R_22235001 RAL-373_125b 3017 chr3R 22236030 22236088 chr3R 22236250 22236308 12 218 6.5 17.5 12.0 0.9 278 chr3R 22236030 intron SKIP + chr3R 22236169 intron SKIP + chr3R 22236308 intron SKIP + chr3R_12_22235001 chr3R_22235001 RAL-373_125b 3018 chr3R 22239465 22239520 chr3R 22248560 22248617 roo 15 9098 2.5 0.5 1.5 6.0 9152 chr3R 22239465 intron SKIP + chr3R 22244041 intron SKIP + chr3R 22248617 intron SKIP + chr3R_15_22240001 chr3R_22240001 RAL-373_125b 3019 chr3R 22292450 22292482 chr3R 22292579 22292607 5 129 11.0 16.5 13.8 0.3 157 chr3R 22292450 exon SKIP + chr3R 22292528 intron SKIP + chr3R 22292607 intron SKIP + chr3R_5_22290001 chr3R_22290001 RAL-373_125b 3020 chr3R 22336060 22336077 chr3R 22336199 22336215 4 140 13.5 9.0 11.2 0.3 155 chr3R 22336060 intron CG5388 - chr3R 22336138 intron CG5388 - chr3R 22336215 intron CG5388 - chr3R_4_22335001 chr3R_22335001 RAL-373_125b 3021 chr3R 22346146 22346207 chr3R 22346282 22346336 5 134 12.0 10.0 11.0 0.4 190 chr3R 22346146 intergenic not near genes chr3R 22346241 intergenic not near genes chr3R 22346336 intergenic not near genes chr3R_5_22345001 chr3R_22345001 RAL-373_125b 3022 chr3R 22424995 22425055 chr3R 22425208 22425266 7 214 21.5 24.0 22.8 0.3 271 chr3R 22424995 intergenic pinta -,CG13847 - chr3R 22425130 intergenic CG13847 -,pinta - chr3R 22425266 3` UTR CG13847 - chr3R_7_22425001 chr3R_22425001 RAL-373_125b 3023 chr3R 22450510 22450565 chr3R 22453190 22453255 NOF 11 2683 5.5 7.0 6.2 1.5 2745 chr3R 22450510 intron CG34376 + chr3R 22451882 intron CG34376 + chr3R 22453255 intron CG34376 + chr3R_11_22450001 chr3R_22450001 RAL-373_125b 3024 chr3R 22453412 22453413 chr3R 22453543 22453589 4 149 12.0 14.5 13.2 0.3 177 chr3R 22453412 intron CG34376 + chr3R 22453500 intron CG34376 + chr3R 22453589 intron CG34376 + chr3R_4_22450001 chr3R_22450001 RAL-373_125b 3025 chr3R 22526263 22526325 chr3R 22526394 22526457 10 131 15.0 17.5 16.2 0.6 194 chr3R 22526263 intron CG5346 - chr3R 22526360 intron CG5346 - chr3R 22526457 intron CG5346 - chr3R_10_22525001 chr3R_22525001 RAL-373_125b 3026 chr3R 22593892 22593926 chr3R 22594027 22594039 7 127 13.5 20.5 17.0 0.4 147 chr3R 22593892 intron Efa6 + chr3R 22593966 intron Efa6 + chr3R 22594039 intron Efa6 + chr3R_7_22590001 chr3R_22590001 RAL-373_125b 3027 chr3R 22619801 22619811 chr3R 22620033 22620048 5 236 14.5 14.0 14.2 0.3 247 chr3R 22619801 3` UTR mRpL45 + chr3R 22619924 intergenic loco -,mRpL45 + chr3R 22620048 3` UTR loco - chr3R_5_22615001 chr3R_22615001 RAL-373_125b 3028 chr3R 22619812 22619869 chr3R 22620032 22620106 10 234 9.5 14.0 11.8 0.8 294 chr3R 22619812 3` UTR mRpL45 + chr3R 22619959 intergenic loco -,mRpL45 + chr3R 22620106 3` UTR loco - chr3R_10_22615001 chr3R_22615001 RAL-373_125b 3029 chr3R 22650450 22650469 chr3R 22650582 22650601 4 128 21.0 14.0 17.5 0.2 151 chr3R 22650450 intron wake + chr3R 22650526 intron wake + chr3R 22650601 intron wake + chr3R_4_22650001 chr3R_22650001 RAL-373_125b 3030 chr3R 22657006 22657069 chr3R 22657140 22657199 10 130 9.5 5.5 7.5 1.2 193 chr3R 22657006 exon wake + chr3R 22657102 intron wake + chr3R 22657199 intron wake + chr3R_10_22655001 chr3R_22655001 RAL-373_125b 3031 chr3R 22684162 22684220 chr3R 22684288 22684346 7 124 17.5 17.5 17.5 0.4 184 chr3R 22684162 intergenic not near genes chr3R 22684254 intergenic not near genes chr3R 22684346 intergenic not near genes chr3R_7_22680001 chr3R_22680001 RAL-373_125b 3032 chr3R 22769061 22769122 chr3R 22769188 22769240 6 124 15.0 19.5 17.2 0.3 179 chr3R 22769061 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769150 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769240 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_6_22765001 chr3R_22765001 RAL-373_125b 3033 chr3R 22772154 22772205 chr3R 22772321 22772372 7 166 14.0 17.5 15.8 0.4 218 chr3R 22772154 intron,intron CG7029 +,Usp12-46 + chr3R 22772263 intron,intron CG7029 +,Usp12-46 + chr3R 22772372 intron,intron CG7029 +,Usp12-46 + chr3R_7_22770001 chr3R_22770001 RAL-373_125b 3034 chr3R 22793533 22793596 chr3R 22793677 22793739 11 142 9.0 8.0 8.5 1.2 206 chr3R 22793533 3` UTR CG7029 + chr3R 22793636 3` UTR CG7029 + chr3R 22793739 3` UTR CG7029 + chr3R_11_22790001 chr3R_22790001 RAL-373_125b 3035 chr3R 22860106 22860159 chr3R 22860248 22860300 9 136 0.0 4.0 2.0 3.0 194 chr3R 22860106 intergenic not near genes chr3R 22860203 intergenic not near genes chr3R 22860300 intergenic not near genes chr3R_9_22860001 chr3R_22860001 RAL-373_125b 3036 chr3R 22863875 22863926 chr3R 22864003 22864044 6 126 10.5 10.5 10.5 0.5 169 chr3R 22863875 intergenic not near genes chr3R 22863960 intergenic not near genes chr3R 22864044 intergenic not near genes chr3R_6_22860001 chr3R_22860001 RAL-373_125b 3037 chr3R 22867267 22867326 chr3R 22867394 22867453 10 121 14.0 18.0 16.0 0.6 186 chr3R 22867267 intergenic not near genes chr3R 22867360 intergenic not near genes chr3R 22867453 intergenic not near genes chr3R_10_22865001 chr3R_22865001 RAL-373_125b 3038 chr3R 22871396 22871453 chr3R 22871567 22871631 6 174 12.0 8.0 10.0 0.5 235 chr3R 22871396 intergenic not near genes chr3R 22871514 intergenic not near genes chr3R 22871631 intergenic not near genes chr3R_6_22870001 chr3R_22870001 RAL-373_125b 3039 chr3R 22877252 22877321 chr3R 22877430 22877498 5 169 10.5 7.0 8.8 0.5 246 chr3R 22877252 intergenic not near genes chr3R 22877375 intergenic not near genes chr3R 22877498 intergenic not near genes chr3R_5_22875001 chr3R_22875001 RAL-373_125b 3040 chr3R 22880573 22880614 chr3R 22880685 22880741 6 121 6.0 3.5 4.8 1.0 168 chr3R 22880573 intergenic not near genes chr3R 22880657 intergenic not near genes chr3R 22880741 intergenic not near genes chr3R_6_22880001 chr3R_22880001 RAL-373_125b 3041 chr3R 22880897 22880947 chr3R 22881075 22881135 12 184 4.0 3.0 3.5 2.7 238 chr3R 22880897 intergenic not near genes chr3R 22881016 intergenic not near genes chr3R 22881135 intergenic not near genes chr3R_12_22880001 chr3R_22880001 RAL-373_125b 3042 chr3R 22881204 22881228 chr3R 22884959 22884983 Doc 5 3755 4.5 9.0 6.8 0.6 3779 chr3R 22881204 intergenic not near genes chr3R 22883094 intergenic not near genes chr3R 22884983 intergenic not near genes chr3R_5_22880001 chr3R_22880001 RAL-373_125b 3043 chr3R 22916245 22916275 chr3R 22916342 22916381 6 118 9.5 8.5 9.0 0.6 136 chr3R 22916245 intron klg + chr3R 22916313 intron klg + chr3R 22916381 intron klg + chr3R_6_22915001 chr3R_22915001 RAL-373_125b 3044 chr3R 22949054 22949065 chr3R 22949410 22949466 4 377 12.0 14.0 13.0 0.3 412 chr3R 22949054 intron klg + chr3R 22949260 intron klg + chr3R 22949466 intron klg + chr3R_4_22945001 chr3R_22945001 RAL-373_125b 3045 chr3R 22953799 22953856 chr3R 22954491 22954518 10 692 13.0 9.5 11.2 0.8 719 chr3R 22953799 intron klg + chr3R 22954158 intron klg + chr3R 22954518 intron klg + chr3R_10_22950001 chr3R_22950001 RAL-373_125b 3046 chr3R 22954472 22954523 chr3R 22954621 22954664 7 150 4.0 5.0 4.5 1.3 192 chr3R 22954472 intron klg + chr3R 22954568 intron klg + chr3R 22954664 intron klg + chr3R_7_22950001 chr3R_22950001 RAL-373_125b 3047 chr3R 22974272 22974310 chr3R 22974394 22974444 18 130 0.0 6.5 3.2 4.3 172 chr3R 22974272 intergenic not near genes chr3R 22974358 intergenic not near genes chr3R 22974444 intergenic not near genes chr3R_18_22970001 chr3R_22970001 RAL-373_125b 3048 chr3R 22979710 22979777 chr3R 22979838 22979886 14 123 13.0 14.5 13.8 0.9 176 chr3R 22979710 intergenic not near genes chr3R 22979798 intergenic not near genes chr3R 22979886 intergenic not near genes chr3R_14_22975001 chr3R_22975001 RAL-373_125b 3049 chr3R 23001575 23001640 chr3R 23001726 23001791 6 151 12.0 13.5 12.8 0.4 216 chr3R 23001575 exon CG34375 - chr3R 23001683 intron CG34375 - chr3R 23001791 intron CG34375 - chr3R_6_23000001 chr3R_23000001 RAL-373_125b 3050 chr3R 23008323 23008355 chr3R 23008466 23008474 4 137 8.0 2.5 5.2 0.6 151 chr3R 23008323 intron CG34375 - chr3R 23008398 intron CG34375 - chr3R 23008474 intron CG34375 - chr3R_4_23005001 chr3R_23005001 RAL-373_125b 3051 chr3R 23064132 23064190 chr3R 23064291 23064336 8 149 16.5 18.5 17.5 0.4 204 chr3R 23064132 exon CG17111 - chr3R 23064234 intron CG17111 - chr3R 23064336 exon CG17111 - chr3R_8_23060001 chr3R_23060001 RAL-373_125b 3052 chr3R 23090354 23090429 chr3R 23090486 23090562 13 127 12.0 13.5 12.8 0.9 208 chr3R 23090354 intron CG13830 - chr3R 23090458 intron CG13830 - chr3R 23090562 intron CG13830 - chr3R_13_23090001 chr3R_23090001 RAL-373_125b 3053 chr3R 23100107 23100390 chr3R 23100241 23100521 19 129 21.0 9.0 15.0 1.2 414 chr3R 23100107 intron,exon CG13830 -,CG6738 + chr3R 23100314 intron,exon CG13830 -,CG6738 + chr3R 23100521 intron,exon CG13830 -,CG6738 + chr3R_19_23100001 chr3R_23100001 RAL-373_125b 3054 chr3R 23107672 23107732 chr3R 23107786 23107858 8 119 22.5 20.0 21.2 0.4 186 chr3R 23107672 intron CG13830 - chr3R 23107765 intron CG13830 - chr3R 23107858 intron CG13830 - chr3R_8_23105001 chr3R_23105001 RAL-373_125b 3055 chr3R 23145115 23145181 chr3R 23145242 23145275 10 116 15.5 17.5 16.5 0.6 160 chr3R 23145115 intergenic not near genes chr3R 23145195 intergenic not near genes chr3R 23145275 intergenic not near genes chr3R_10_23145001 chr3R_23145001 RAL-373_125b 3056 chr3R 23171759 23171823 chr3R 23171889 23171913 8 120 15.5 17.0 16.2 0.5 154 chr3R 23171759 intron Irk1 + chr3R 23171836 intron Irk1 + chr3R 23171913 intron Irk1 + chr3R_8_23170001 chr3R_23170001 RAL-373_125b 3057 chr3R 23182443 23182457 chr3R 23182610 23182622 4 165 18.5 10.0 14.2 0.3 179 chr3R 23182443 intron Irk1 + chr3R 23182532 intron Irk1 + chr3R 23182622 intron Irk1 + chr3R_4_23180001 chr3R_23180001 RAL-373_125b 3058 chr3R 23182458 23182677 chr3R 23182614 23182810 13 142 4.5 10.0 7.2 1.6 352 chr3R 23182458 intron Irk1 + chr3R 23182634 intron Irk1 + chr3R 23182810 intron Irk1 + chr3R_13_23180001 chr3R_23180001 RAL-373_125b 3059 chr3R 23211930 23211989 chr3R 23212058 23212116 8 127 16.5 16.0 16.2 0.5 186 chr3R 23211930 intron cnc - chr3R 23212023 intron cnc - chr3R 23212116 intron cnc - chr3R_8_23210001 chr3R_23210001 RAL-373_125b 3060 chr3R 23214199 23214242 chr3R 23214335 23214379 9 134 11.0 10.0 10.5 0.8 180 chr3R 23214199 intron cnc - chr3R 23214289 intron cnc - chr3R 23214379 intron cnc - chr3R_9_23210001 chr3R_23210001 RAL-373_125b 3061 chr3R 23242245 23242307 chr3R 23242375 23242392 6 110 20.5 17.5 19.0 0.3 147 chr3R 23242245 intron CG4467 - chr3R 23242318 intron CG4467 - chr3R 23242392 intron CG4467 - chr3R_6_23240001 chr3R_23240001 RAL-373_125b 3062 chr3R 23245966 23245981 chr3R 23246098 23246112 6 129 6.5 11.0 8.8 0.6 146 chr3R 23245966 intron CG4467 - chr3R 23246039 intron CG4467 - chr3R 23246112 intron CG4467 - chr3R_6_23245001 chr3R_23245001 RAL-373_125b 3063 chr3R 23245989 23246020 chr3R 23246091 23246102 7 114 3.5 10.0 6.8 0.9 113 chr3R 23245989 intron CG4467 - chr3R 23246046 intron CG4467 - chr3R 23246102 intron CG4467 - chr3R_7_23245001 chr3R_23245001 RAL-373_125b 3064 chr3R 23291218 23291282 chr3R 23291313 23291388 14 119 6.0 7.0 6.5 1.9 170 chr3R 23291218 3` UTR pnt - chr3R 23291303 3` UTR pnt - chr3R 23291388 exon pnt - chr3R_14_23290001 chr3R_23290001 RAL-373_125b 3065 chr3R 23305194 23305272 chr3R 23305592 23305649 8 395 14.5 11.0 12.8 0.6 455 chr3R 23305194 intron pnt - chr3R 23305422 intron pnt - chr3R 23305649 intron pnt - chr3R_8_23305001 chr3R_23305001 RAL-373_125b 3066 chr3R 23323997 23324057 chr3R 23324128 23324193 9 133 6.5 0.0 3.2 2.1 196 chr3R 23323997 intron pnt - chr3R 23324095 intron pnt - chr3R 23324193 intron pnt - chr3R_9_23320001 chr3R_23320001 RAL-373_125b 3067 chr3R 23356957 23357010 chr3R 23357093 23357120 5 128 9.5 4.5 7.0 0.6 163 chr3R 23356957 intron Sec13 + chr3R 23357038 intron Sec13 + chr3R 23357120 intron Sec13 + chr3R_5_23355001 chr3R_23355001 RAL-373_125b 3068 chr3R 23380078 23380135 chr3R 23380230 23380288 6 147 16.5 18.0 17.2 0.3 210 chr3R 23380078 exon CG4393 - chr3R 23380183 intron CG4393 - chr3R 23380288 exon CG4393 - chr3R_6_23380001 chr3R_23380001 RAL-373_125b 3069 chr3R 23421942 23422008 chr3R 23422068 23422127 7 127 4.5 4.0 4.2 1.3 185 chr3R 23421942 intron CG4374 - chr3R 23422034 intron CG4374 - chr3R 23422127 intron CG4374 - chr3R_7_23420001 chr3R_23420001 RAL-373_125b 3070 chr3R 23446239 23446295 chr3R 23446362 23446407 5 117 11.5 13.0 12.2 0.4 168 chr3R 23446239 intron CG4374 - chr3R 23446323 intron CG4374 - chr3R 23446407 intron CG4374 - chr3R_5_23445001 chr3R_23445001 RAL-373_125b 3071 chr3R 23476113 23476121 chr3R 23476229 23476234 4 120 15.0 14.5 14.8 0.3 121 chr3R 23476113 intergenic not near genes chr3R 23476174 intergenic not near genes chr3R 23476234 intergenic not near genes chr3R_4_23475001 chr3R_23475001 RAL-373_125b 3072 chr3R 23540749 23540785 chr3R 23540876 23540920 8 136 15.0 12.0 13.5 0.6 171 chr3R 23540749 intergenic not near genes chr3R 23540834 intergenic not near genes chr3R 23540920 intergenic not near genes chr3R_8_23540001 chr3R_23540001 RAL-373_125b 3073 chr3R 23543256 23543334 chr3R 23543383 23543461 9 125 9.5 11.0 10.2 0.8 205 chr3R 23543256 intergenic not near genes chr3R 23543358 intergenic not near genes chr3R 23543461 intergenic not near genes chr3R_9_23540001 chr3R_23540001 RAL-373_125b 3074 chr3R 23549112 23549159 chr3R 23549253 23549267 7 131 15.0 7.0 11.0 0.6 155 chr3R 23549112 intergenic not near genes chr3R 23549190 intergenic not near genes chr3R 23549267 intergenic not near genes chr3R_7_23545001 chr3R_23545001 RAL-373_125b 3075 chr3R 23558348 23558424 chr3R 23560179 23560255 Bari1 11 1826 4.5 2.5 3.5 2.4 1907 chr3R 23558348 intron beat-IV + chr3R 23559302 intron beat-IV + chr3R 23560255 intron beat-IV + chr3R_11_23555001 chr3R_23555001 RAL-373_125b 3076 chr3R 23565831 23565869 chr3R 23565968 23566025 6 153 14.0 11.5 12.8 0.4 194 chr3R 23565831 intron beat-IV + chr3R 23565928 intron beat-IV + chr3R 23566025 intron beat-IV + chr3R_6_23565001 chr3R_23565001 RAL-373_125b 3077 chr3R 23574159 23574193 chr3R 23574287 23574321 5 128 15.0 10.5 12.8 0.4 162 chr3R 23574159 intron beat-IV + chr3R 23574240 intron beat-IV + chr3R 23574321 exon beat-IV + chr3R_5_23570001 chr3R_23570001 RAL-373_125b 3078 chr3R 23589989 23590049 chr3R 23590137 23590187 6 145 17.0 21.0 19.0 0.3 198 chr3R 23589989 intergenic CG33337 -,CG10182 - chr3R 23590088 intergenic CG33337 -,CG10182 - chr3R 23590187 exon CG33337 - chr3R_6_23590001 chr3R_23590001 RAL-373_125b 3079 chr3R 23615303 23615341 chr3R 23615420 23615468 10 121 18.0 15.0 16.5 0.6 165 chr3R 23615303 intron CG31145 - chr3R 23615386 intron CG31145 - chr3R 23615468 intron CG31145 - chr3R_10_23615001 chr3R_23615001 RAL-373_125b 3080 chr3R 23629777 23629849 chr3R 23629906 23629922 11 121 16.0 14.5 15.2 0.7 145 chr3R 23629777 intron CG31145 - chr3R 23629850 intron CG31145 - chr3R 23629922 intron CG31145 - chr3R_11_23625001 chr3R_23625001 RAL-373_125b 3081 chr3R 23672058 23672080 chr3R 23672209 23672231 6 151 15.5 15.0 15.2 0.4 173 chr3R 23672058 intergenic not near genes chr3R 23672144 intergenic not near genes chr3R 23672231 intergenic not near genes chr3R_6_23670001 chr3R_23670001 RAL-373_125b 3082 chr3R 23684658 23684723 chr3R 23685181 23685259 roo 14 524 5.0 6.5 5.8 2.1 601 chr3R 23684658 exon CG18754 + chr3R 23684958 intron CG18754 + chr3R 23685259 exon CG18754 + chr3R_14_23680001 chr3R_23680001 RAL-373_125b 3083 chr3R 23765717 23765775 chr3R 23765847 23765904 9 125 7.5 9.5 8.5 0.9 187 chr3R 23765717 intron Lsd-1 + chr3R 23765810 intron Lsd-1 + chr3R 23765904 exon Lsd-1 + chr3R_9_23765001 chr3R_23765001 RAL-373_125b 3084 chr3R 23808438 23808499 chr3R 23808611 23808659 10 167 15.0 18.0 16.5 0.6 221 chr3R 23808438 intron,intron,3` UTR CG33111 -,CG34355 +,eIF4G2 - chr3R 23808548 intron,intron,3` UTR CG33111 -,CG34355 +,eIF4G2 - chr3R 23808659 intron,intron,3` UTR CG33111 -,CG34355 +,eIF4G2 - chr3R_10_23805001 chr3R_23805001 RAL-373_125b 3085 chr3R 23815804 23815845 chr3R 23815930 23815997 8 153 11.5 9.5 10.5 0.7 193 chr3R 23815804 intron,intron,exon CG33111 -,CG34355 +,eIF4G2 - chr3R 23815900 intron,intron,exon CG33111 -,CG34355 +,eIF4G2 - chr3R 23815997 intron,intron,exon CG33111 -,CG34355 +,eIF4G2 - chr3R_8_23815001 chr3R_23815001 RAL-373_125b 3086 chr3R 23820610 23820632 chr3R 23820734 23820766 5 132 14.0 14.5 14.2 0.3 156 chr3R 23820610 5` UTR CG34355 + chr3R 23820688 5` UTR CG34355 + chr3R 23820766 5` UTR CG34355 + chr3R_5_23820001 chr3R_23820001 RAL-373_125b 3087 chr3R 23820635 23820664 chr3R 23820719 23820798 4 116 11.5 14.0 12.8 0.3 163 chr3R 23820635 5` UTR CG34355 + chr3R 23820716 5` UTR CG34355 + chr3R 23820798 5` UTR CG34355 + chr3R_4_23820001 chr3R_23820001 RAL-373_125b 3088 chr3R 23835363 23835429 chr3R 23844565 23844628 roo 9 9200 6.5 6.5 6.5 1.2 9265 chr3R 23835363 intron CG34355 + chr3R 23839996 intron CG34355 + chr3R 23844628 intron CG34355 + chr3R_9_23835001 chr3R_23835001 RAL-373_125b 3089 chr3R 23851037 23851082 chr3R 23858754 23858798 opus 12 7716 5.0 11.0 8.0 1.3 7761 chr3R 23851037 3` UTR CG34355 + chr3R 23854918 intergenic not near genes chr3R 23858798 intergenic not near genes chr3R_12_23850001 chr3R_23850001 RAL-373_125b 3090 chr3R 23868198 23868239 chr3R 23868310 23868367 8 118 15.0 12.5 13.8 0.5 169 chr3R 23868198 intron Pli - chr3R 23868282 intron Pli - chr3R 23868367 intron Pli - chr3R_8_23865001 chr3R_23865001 RAL-373_125b 3091 chr3R 23873942 23873969 chr3R 23874064 23874073 12 119 9.5 10.5 10.0 1.1 131 chr3R 23873942 intron Pli - chr3R 23874008 intron Pli - chr3R 23874073 intron Pli - chr3R_12_23870001 chr3R_23870001 RAL-373_125b 3092 chr3R 23888057 23888099 chr3R 23888186 23888235 6 135 12.0 14.0 13.0 0.4 178 chr3R 23888057 intron Pli - chr3R 23888146 intron Pli - chr3R 23888235 intron Pli - chr3R_6_23885001 chr3R_23885001 RAL-373_125b 3093 chr3R 23911378 23911401 chr3R 23911730 23911752 6 348 21.5 16.5 19.0 0.3 374 chr3R 23911378 intron sba - chr3R 23911565 intron sba - chr3R 23911752 intron sba - chr3R_6_23910001 chr3R_23910001 RAL-373_125b 3094 chr3R 23943305 23943355 chr3R 23943435 23943485 7 129 12.5 14.5 13.5 0.5 180 chr3R 23943305 intergenic Gdh -,CG12268 - chr3R 23943395 intergenic CG12268 -,Gdh - chr3R 23943485 intergenic CG12268 -,Gdh - chr3R_7_23940001 chr3R_23940001 RAL-373_125b 3095 chr3R 23944882 23944928 chr3R 23945017 23945044 12 132 12.5 11.0 11.8 0.9 162 chr3R 23944882 intron CG12268 - chr3R 23944963 intron CG12268 - chr3R 23945044 exon CG12268 - chr3R_12_23940001 chr3R_23940001 RAL-373_125b 3096 chr3R 23948991 23949075 chr3R 23949118 23949197 9 125 13.0 14.0 13.5 0.6 206 chr3R 23948991 intergenic not near genes chr3R 23949094 intergenic not near genes chr3R 23949197 intergenic not near genes chr3R_9_23945001 chr3R_23945001 RAL-373_125b 3097 chr3R 23950186 23950235 chr3R 23951767 23951814 9 1581 21.0 30.5 25.8 0.3 1628 chr3R 23950186 intergenic not near genes chr3R 23951000 intergenic not near genes chr3R 23951814 intergenic Aats-glupro - chr3R_9_23950001 chr3R_23950001 RAL-373_125b 3098 chr3R 23949808 23949866 chr3R 23951844 23951922 12 2042 19.5 32.5 26.0 0.4 2114 chr3R 23949808 intergenic not near genes chr3R 23950865 intergenic not near genes chr3R 23951922 intergenic Aats-glupro - chr3R_12_23950001 chr3R_23950001 RAL-373_125b 3099 chr3R 23962432 23962475 chr3R 23962586 23962629 7 157 11.0 8.0 9.5 0.7 197 chr3R 23962432 3` UTR AP-1sigma + chr3R 23962530 3` UTR AP-1sigma + chr3R 23962629 intergenic AP-1sigma + chr3R_7_23960001 chr3R_23960001 RAL-373_125b 3100 chr3R 23985712 23985783 chr3R 23985859 23985930 10 143 12.5 16.0 14.2 0.7 218 chr3R 23985712 intron CG13603 - chr3R 23985821 intron CG13603 - chr3R 23985930 exon CG13603 - chr3R_10_23985001 chr3R_23985001 RAL-373_125b 3101 chr3R 24011626 24011672 chr3R 24011759 24011805 8 132 1.0 11.0 6.0 1.1 179 chr3R 24011626 intron KrT95D - chr3R 24011716 intron KrT95D - chr3R 24011805 intron KrT95D - chr3R_8_24010001 chr3R_24010001 RAL-373_125b 3102 chr3R 24072054 24072109 chr3R 24072527 24072566 jockey 25 478 9.5 6.5 8.0 2.8 512 chr3R 24072054 intron 4EHP - chr3R 24072310 intron 4EHP - chr3R 24072566 intron 4EHP - chr3R_25_24070001 chr3R_24070001 RAL-373_125b 3103 chr3R 24074522 24074587 chr3R 24074648 24074713 9 124 13.5 13.0 13.2 0.6 191 chr3R 24074522 intron 4EHP - chr3R 24074618 intron 4EHP - chr3R 24074713 intron 4EHP - chr3R_9_24070001 chr3R_24070001 RAL-373_125b 3104 chr3R 24076885 24076934 chr3R 24078401 24078451 hobo 18 1513 3.0 7.5 5.2 2.9 1566 chr3R 24076885 intron 4EHP - chr3R 24077668 intron 4EHP - chr3R 24078451 intron 4EHP - chr3R_18_24075001 chr3R_24075001 RAL-373_125b 3105 chr3R 24087503 24087521 chr3R 24087636 24087659 4 134 9.0 7.5 8.2 0.4 156 chr3R 24087503 intron 4EHP - chr3R 24087581 intron 4EHP - chr3R 24087659 intron 4EHP - chr3R_4_24085001 chr3R_24085001 RAL-373_125b 3106 chr3R 24100850 24100878 chr3R 24101041 24101059 4 187 8.0 8.5 8.2 0.4 209 chr3R 24100850 intron 4EHP - chr3R 24100954 intron 4EHP - chr3R 24101059 intron 4EHP - chr3R_4_24100001 chr3R_24100001 RAL-373_125b 3107 chr3R 24103291 24103339 chr3R 24103429 24103461 6 130 15.0 11.0 13.0 0.4 170 chr3R 24103291 intron,intron 4EHP -,Syx1A - chr3R 24103376 intron,intron 4EHP -,Syx1A - chr3R 24103461 intron,intron 4EHP -,Syx1A - chr3R_6_24100001 chr3R_24100001 RAL-373_125b 3108 chr3R 24149463 24149512 chr3R 24149642 24149693 7 185 17.0 20.5 18.8 0.4 230 chr3R 24149463 exon p38c - chr3R 24149578 exon p38c - chr3R 24149693 exon p38c - chr3R_7_24145001 chr3R_24145001 RAL-373_125b 3109 chr3R 24173504 24173546 chr3R 24173636 24173667 9 128 14.5 10.0 12.2 0.7 163 chr3R 24173504 intron CG13606 + chr3R 24173586 intron CG13606 + chr3R 24173667 intron CG13606 + chr3R_9_24170001 chr3R_24170001 RAL-373_125b 3110 chr3R 24199694 24199760 chr3R 24199824 24199862 12 125 3.5 4.5 4.0 2.4 168 chr3R 24199694 intron twin - chr3R 24199778 intron twin - chr3R 24199862 intron twin - chr3R_12_24195001 chr3R_24195001 RAL-373_125b 3111 chr3R 24200264 24200312 chr3R 24200389 24200416 6 120 14.0 18.0 16.0 0.4 152 chr3R 24200264 intron twin - chr3R 24200340 intron twin - chr3R 24200416 intron twin - chr3R_6_24200001 chr3R_24200001 RAL-373_125b 3112 chr3R 24201926 24201984 chr3R 24202064 24202122 6 128 12.0 13.0 12.5 0.4 196 chr3R 24201926 intron twin - chr3R 24202024 intron twin - chr3R 24202122 intron twin - chr3R_6_24200001 chr3R_24200001 RAL-373_125b 3113 chr3R 24207171 24207231 chr3R 24212297 24212352 flea 13 5121 6.5 7.0 6.8 1.7 5181 chr3R 24207171 intron twin - chr3R 24209762 intron twin - chr3R 24212352 intron twin - chr3R_13_24205001 chr3R_24205001 RAL-373_125b 3114 chr3R 24214036 24214043 chr3R 24214150 24214172 4 124 18.0 16.0 17.0 0.2 136 chr3R 24214036 intron twin - chr3R 24214104 intron twin - chr3R 24214172 intron twin - chr3R_4_24210001 chr3R_24210001 RAL-373_125b 3115 chr3R 24214052 24214072 chr3R 24214178 24214191 6 124 16.5 15.0 15.8 0.4 139 chr3R 24214052 intron twin - chr3R 24214122 intron twin - chr3R 24214191 intron twin - chr3R_6_24210001 chr3R_24210001 RAL-373_125b 3116 chr3R 24359604 24359619 chr3R 24359736 24359745 7 135 11.5 10.5 11.0 0.6 141 chr3R 24359604 intron CG18528 - chr3R 24359674 intron CG18528 - chr3R 24359745 intron CG18528 - chr3R_7_24355001 chr3R_24355001 RAL-373_125b 3117 chr3R 24391869 24391915 chr3R 24392035 24392078 6 164 16.5 9.0 12.8 0.4 209 chr3R 24391869 3` UTR CG13615 + chr3R 24391974 intergenic CG13615 + chr3R 24392078 intergenic CG13615 + chr3R_6_24390001 chr3R_24390001 RAL-373_125b 3118 chr3R 24431551 24431589 chr3R 24431680 24431718 7 128 20.0 11.0 15.5 0.4 167 chr3R 24431551 intron nAChRalpha1 - chr3R 24431634 intron nAChRalpha1 - chr3R 24431718 intron nAChRalpha1 - chr3R_7_24430001 chr3R_24430001 RAL-373_125b 3119 chr3R 24434202 24434273 chr3R 24434330 24434341 12 122 4.0 6.5 5.2 1.9 139 chr3R 24434202 intron nAChRalpha1 - chr3R 24434272 intron nAChRalpha1 - chr3R 24434341 intron nAChRalpha1 - chr3R_12_24430001 chr3R_24430001 RAL-373_125b 3120 chr3R 24444955 24445028 chr3R 24445082 24445150 9 122 12.0 10.5 11.2 0.7 195 chr3R 24444955 intron nAChRalpha1 - chr3R 24445052 intron nAChRalpha1 - chr3R 24445150 intron nAChRalpha1 - chr3R_9_24445001 chr3R_24445001 RAL-373_125b 3121 chr3R 24464163 24464221 chr3R 24464349 24464384 9 183 16.0 14.5 15.2 0.6 221 chr3R 24464163 intergenic CR45649 - chr3R 24464274 intergenic CR45649 - chr3R 24464384 intergenic CR45649 - chr3R_9_24460001 chr3R_24460001 RAL-373_125b 3122 chr3R 24477573 24477602 chr3R 24477687 24477729 8 124 19.5 18.5 19.0 0.4 156 chr3R 24477573 intergenic not near genes chr3R 24477651 intergenic not near genes chr3R 24477729 intergenic not near genes chr3R_8_24475001 chr3R_24475001 RAL-373_125b 3123 chr3R 24501951 24501999 chr3R 24502069 24502134 10 129 17.0 14.5 15.8 0.6 183 chr3R 24501951 intergenic not near genes chr3R 24502042 intergenic not near genes chr3R 24502134 intergenic not near genes chr3R_10_24500001 chr3R_24500001 RAL-373_125b 3124 chr3R 24524808 24524877 chr3R 24524937 24525001 6 120 14.5 14.5 14.5 0.4 193 chr3R 24524808 5` UTR CG13618 + chr3R 24524904 5` UTR CG13618 + chr3R 24525001 exon CG13618 + chr3R_6_24520001 chr3R_24520001 RAL-373_125b 3125 chr3R 24527768 24527810 chr3R 24527904 24527945 5 139 10.0 6.0 8.0 0.6 177 chr3R 24527768 intergenic CG13618 +,CG6607 + chr3R 24527856 intergenic CG6607 +,CG13618 + chr3R 24527945 intergenic CG6607 +,CG13618 + chr3R_5_24525001 chr3R_24525001 RAL-373_125b 3126 chr3R 24581485 24581513 chr3R 24581616 24581639 6 129 11.0 17.0 14.0 0.4 154 chr3R 24581485 intron CG13624 - chr3R 24581562 intron CG13624 - chr3R 24581639 intron CG13624 - chr3R_6_24580001 chr3R_24580001 RAL-373_125b 3127 chr3R 24594629 24594663 chr3R 24594919 24594953 pogo 12 287 8.0 10.0 9.0 1.2 324 chr3R 24594629 intron mld + chr3R 24594791 intron mld + chr3R 24594953 intron mld + chr3R_12_24590001 chr3R_24590001 RAL-373_125b 3128 chr3R 24624327 24624391 chr3R 24624466 24624530 9 137 4.0 7.0 5.5 1.4 203 chr3R 24624327 intron Syx18 - chr3R 24624428 intron Syx18 - chr3R 24624530 exon Syx18 - chr3R_9_24620001 chr3R_24620001 RAL-373_125b 3129 chr3R 24667558 24667593 chr3R 24667685 24667720 6 126 4.0 0.0 2.0 2.0 162 chr3R 24667558 intron slo + chr3R 24667639 intron slo + chr3R 24667720 intron slo + chr3R_6_24665001 chr3R_24665001 RAL-373_125b 3130 chr3R 24670139 24670190 chr3R 24670269 24670325 6 133 12.0 9.5 10.8 0.5 186 chr3R 24670139 intron slo + chr3R 24670232 intron slo + chr3R 24670325 intron slo + chr3R_6_24670001 chr3R_24670001 RAL-373_125b 3131 chr3R 24714153 24714217 chr3R 24714275 24714280 11 113 14.5 16.5 15.5 0.7 127 chr3R 24714153 intron CG13627 + chr3R 24714216 intron CG13627 + chr3R 24714280 intron CG13627 + chr3R_11_24710001 chr3R_24710001 RAL-373_125b 3132 chr3R 24730062 24730115 chr3R 24732478 24732545 Doc 6 2423 4.5 0.0 2.2 1.9 2483 chr3R 24730062 intron tok + chr3R 24731304 intron tok + chr3R 24732545 intron tok + chr3R_6_24730001 chr3R_24730001 RAL-373_125b 3133 chr3R 24742983 24743052 chr3R 24743118 24743182 8 134 12.5 16.0 14.2 0.5 199 chr3R 24742983 intron tok + chr3R 24743082 intron tok + chr3R 24743182 exon tok + chr3R_8_24740001 chr3R_24740001 RAL-373_125b 3134 chr3R 24770361 24770380 chr3R 24770450 24770506 6 117 17.0 14.0 15.5 0.4 145 chr3R 24770361 3` UTR CG13631 + chr3R 24770434 3` UTR CG13631 + chr3R 24770506 3` UTR CG13631 + chr3R_6_24770001 chr3R_24770001 RAL-373_125b 3135 chr3R 24785047 24785106 chr3R 24785157 24785207 8 113 18.5 18.5 18.5 0.4 160 chr3R 24785047 3` UTR CG5805 - chr3R 24785127 3` UTR CG5805 - chr3R 24785207 3` UTR CG5805 - chr3R_8_24785001 chr3R_24785001 RAL-373_125b 3136 chr3R 24787505 24787547 chr3R 24787631 24787673 5 124 1.5 0.5 1.0 2.5 168 chr3R 24787505 intergenic CG5805 - chr3R 24787589 intergenic CG5805 -,Ets96B + chr3R 24787673 intergenic CG5805 -,Ets96B + chr3R_5_24785001 chr3R_24785001 RAL-373_125b 3137 chr3R 24790645 24790696 chr3R 24790776 24790818 6 125 13.5 5.5 9.5 0.6 173 chr3R 24790645 intron Ets96B + chr3R 24790732 intron Ets96B + chr3R 24790818 intron Ets96B + chr3R_6_24790001 chr3R_24790001 RAL-373_125b 3138 chr3R 24842966 24842996 chr3R 24843147 24843172 5 179 23.0 17.0 20.0 0.2 206 chr3R 24842966 intron Esp + chr3R 24843069 intron Esp + chr3R 24843172 intron Esp + chr3R_5_24840001 chr3R_24840001 RAL-373_125b 3139 chr3R 24854860 24854883 chr3R 24854987 24855015 6 131 14.5 18.0 16.2 0.3 155 chr3R 24854860 3` UTR,3` UTR nct +,HdacX - chr3R 24854938 3` UTR HdacX - chr3R 24855015 3` UTR HdacX - chr3R_6_24850001 chr3R_24850001 RAL-373_125b 3140 chr3R 24912794 24912843 chr3R 24912897 24912943 10 113 16.0 11.0 13.5 0.7 149 chr3R 24912794 intergenic CR44267 +,PIG-S - chr3R 24912868 intergenic CR44267 +,PIG-S - chr3R 24912943 intergenic CR44267 +,PIG-S - chr3R_10_24910001 chr3R_24910001 RAL-373_125b 3141 chr3R 24927091 24927145 chr3R 24931927 24931986 Doc 16 4837 7.0 5.5 6.2 2.2 4895 chr3R 24927091 intergenic Trf4-2 + chr3R 24929538 intergenic not near genes chr3R 24931986 intergenic CG11771 + chr3R_16_24925001 chr3R_24925001 RAL-373_125b 3142 chr3R 24973910 24973962 chr3R 24974036 24974085 7 123 13.5 13.0 13.2 0.5 175 chr3R 24973910 intergenic not near genes chr3R 24973998 intergenic not near genes chr3R 24974085 intergenic not near genes chr3R_7_24970001 chr3R_24970001 RAL-373_125b 3143 chr3R 24974866 24974916 chr3R 24974995 24975040 9 128 8.0 7.5 7.8 1.0 174 chr3R 24974866 intergenic not near genes chr3R 24974953 intergenic not near genes chr3R 24975040 intergenic not near genes chr3R_9_24970001 chr3R_24970001 RAL-373_125b 3144 chr3R 25004849 25004922 chr3R 25004982 25005055 6 132 1.5 3.5 2.5 1.7 206 chr3R 25004849 intron tnc + chr3R 25004952 intron tnc + chr3R 25005055 intron tnc + chr3R_6_25000001 chr3R_25000001 RAL-373_125b 3145 chr3R 25027495 25027562 chr3R 25027758 25027820 10 259 18.5 15.5 17.0 0.6 325 chr3R 25027495 intron Hr96 + chr3R 25027658 intron Hr96 + chr3R 25027820 intron Hr96 + chr3R_10_25025001 chr3R_25025001 RAL-373_125b 3146 chr3R 25060636 25060707 chr3R 25060918 25060988 6 281 13.0 13.0 13.0 0.4 352 chr3R 25060636 exon Unc-13-4B + chr3R 25060812 intron Unc-13-4B + chr3R 25060988 exon Unc-13-4B + chr3R_6_25060001 chr3R_25060001 RAL-373_125b 3147 chr3R 25075107 25075156 chr3R 25075310 25075363 11 206 4.5 8.5 6.5 1.5 256 chr3R 25075107 exon CG11920 + chr3R 25075235 intron CG11920 + chr3R 25075363 intron CG11920 + chr3R_11_25075001 chr3R_25075001 RAL-373_125b 3148 chr3R 25085238 25085295 chr3R 25085367 25085429 5 131 6.5 7.5 7.0 0.6 191 chr3R 25085238 intergenic fd96Ca + chr3R 25085334 intergenic fd96Ca + chr3R 25085429 intergenic not near genes chr3R_5_25085001 chr3R_25085001 RAL-373_125b 3149 chr3R 25136383 25136418 chr3R 25136513 25136548 8 130 12.5 13.0 12.8 0.6 165 chr3R 25136383 3` UTR Bili + chr3R 25136466 3` UTR Bili + chr3R 25136548 3` UTR Bili + chr3R_8_25135001 chr3R_25135001 RAL-373_125b 3150 chr3R 25166225 25166393 chr3R 25166355 25166504 11 124 3.5 5.5 4.5 2.0 279 chr3R 25166225 intergenic not near genes chr3R 25166364 intergenic not near genes chr3R 25166504 intergenic not near genes chr3R_11_25165001 chr3R_25165001 RAL-373_125b 3151 chr3R 25194311 25194349 chr3R 25194437 25194475 4 126 15.5 14.5 15.0 0.2 164 chr3R 25194311 intergenic not near genes chr3R 25194393 intergenic not near genes chr3R 25194475 intergenic not near genes chr3R_4_25190001 chr3R_25190001 RAL-373_125b 3152 chr3R 25236383 25236399 chr3R 25236784 25236810 5 405 24.5 4.5 14.5 0.3 427 chr3R 25236383 intergenic not near genes chr3R 25236596 intergenic not near genes chr3R 25236810 intergenic not near genes chr3R_5_25235001 chr3R_25235001 RAL-373_125b 3153 chr3R 25296119 25296194 chr3R 25296250 25296315 11 128 13.0 10.5 11.8 0.9 196 chr3R 25296119 intergenic CG31097 - chr3R 25296217 3` UTR CG31097 - chr3R 25296315 3` UTR CG31097 - chr3R_11_25295001 chr3R_25295001 RAL-373_125b 3154 chr3R 25324341 25324388 chr3R 25328955 25329003 Doc 9 4613 2.5 19.5 11.0 0.8 4662 chr3R 25324341 exon CHKov1 - chr3R 25326672 intron CHKov1 - chr3R 25329003 intron CHKov1 - chr3R_9_25325001 chr3R_25325001 RAL-373_125b 3155 chr3R 25368435 25368505 chr3R 25368601 25368677 18 167 5.0 2.5 3.8 3.8 242 chr3R 25368435 intron Fur1 - chr3R 25368556 intron Fur1 - chr3R 25368677 intron Fur1 - chr3R_18_25365001 chr3R_25365001 RAL-373_125b 3156 chr3R 25422029 25422095 chr3R 25422160 25422244 8 131 15.5 17.5 16.5 0.5 215 chr3R 25422029 intron Fur1 - chr3R 25422136 intron Fur1 - chr3R 25422244 intron Fur1 - chr3R_8_25420001 chr3R_25420001 RAL-373_125b 3157 chr3R 25434396 25434404 chr3R 25434538 25434546 4 142 19.5 15.0 17.2 0.2 150 chr3R 25434396 intron Fur1 - chr3R 25434471 intron Fur1 - chr3R 25434546 intron Fur1 - chr3R_4_25430001 chr3R_25430001 RAL-373_125b 3158 chr3R 25434434 25434460 chr3R 25434530 25434602 7 132 17.0 16.5 16.8 0.4 168 chr3R 25434434 intron Fur1 - chr3R 25434518 intron Fur1 - chr3R 25434602 intron Fur1 - chr3R_7_25430001 chr3R_25430001 RAL-373_125b 3159 chr3R 25436476 25436513 chr3R 25436588 25436605 11 117 13.5 15.0 14.2 0.7 129 chr3R 25436476 intron Fur1 - chr3R 25436540 intron Fur1 - chr3R 25436605 intron Fur1 - chr3R_11_25435001 chr3R_25435001 RAL-373_125b 3160 chr3R 25461371 25461408 chr3R 25462015 25462047 10 643 23.5 14.5 19.0 0.5 676 chr3R 25461371 intron Fur1 - chr3R 25461709 intron Fur1 - chr3R 25462047 intron Fur1 - chr3R_10_25460001 chr3R_25460001 RAL-373_125b 3161 chr3R 25464452 25464496 chr3R 25464819 25464863 8 366 15.0 10.0 12.5 0.6 411 chr3R 25464452 intron Fur1 - chr3R 25464658 intron Fur1 - chr3R 25464863 intron Fur1 - chr3R_8_25460001 chr3R_25460001 RAL-373_125b 3162 chr3R 25514397 25514450 chr3R 25514528 25514576 9 130 13.0 17.5 15.2 0.6 179 chr3R 25514397 intergenic not near genes chr3R 25514486 intergenic not near genes chr3R 25514576 intergenic not near genes chr3R_9_25510001 chr3R_25510001 RAL-373_125b 3163 chr3R 25524548 25524610 chr3R 25524683 25524745 9 132 17.0 20.0 18.5 0.5 197 chr3R 25524548 intron msi + chr3R 25524646 intron msi + chr3R 25524745 intron msi + chr3R_9_25520001 chr3R_25520001 RAL-373_125b 3164 chr3R 25571840 25571867 chr3R 25571978 25572000 12 136 8.0 7.0 7.5 1.4 160 chr3R 25571840 intron msi + chr3R 25571920 intron msi + chr3R 25572000 intron msi + chr3R_12_25570001 chr3R_25570001 RAL-373_125b 3165 chr3R 25575906 25575913 chr3R 25576308 25576324 5 407 14.0 17.5 15.8 0.3 418 chr3R 25575906 intron msi + chr3R 25576115 intron msi + chr3R 25576324 intron msi + chr3R_5_25575001 chr3R_25575001 RAL-373_125b 3166 chr3R 25671198 25671267 chr3R 25671346 25671410 10 144 19.5 16.0 17.8 0.5 212 chr3R 25671198 intron Lgr3 + chr3R 25671304 intron Lgr3 + chr3R 25671410 intron Lgr3 + chr3R_10_25670001 chr3R_25670001 RAL-373_125b 3167 chr3R 25689093 25689139 chr3R 25689251 25689297 9 155 8.5 18.0 13.2 0.6 204 chr3R 25689093 intergenic not near genes chr3R 25689195 intergenic not near genes chr3R 25689297 intergenic not near genes chr3R_9_25685001 chr3R_25685001 RAL-373_125b 3168 chr3R 25697911 25697956 chr3R 25698034 25698102 10 138 13.5 12.0 12.8 0.7 191 chr3R 25697911 intergenic not near genes chr3R 25698006 intergenic not near genes chr3R 25698102 intergenic not near genes chr3R_10_25695001 chr3R_25695001 RAL-373_125b 3169 chr3R 25720774 25720828 chr3R 25720916 25720963 7 136 5.5 14.0 9.8 0.6 189 chr3R 25720774 intron LpR2 - chr3R 25720868 intron LpR2 - chr3R 25720963 intron LpR2 - chr3R_7_25720001 chr3R_25720001 RAL-373_125b 3170 chr3R 25721843 25721867 chr3R 25721926 25721978 5 114 8.5 9.5 9.0 0.5 135 chr3R 25721843 intron LpR2 - chr3R 25721910 intron LpR2 - chr3R 25721978 intron LpR2 - chr3R_5_25720001 chr3R_25720001 RAL-373_125b 3171 chr3R 25725787 25725854 chr3R 25734997 25735058 roo 19 9207 7.0 5.5 6.2 2.6 9271 chr3R 25725787 intron LpR2 - chr3R 25730422 intron LpR2 - chr3R 25735058 intron LpR2 - chr3R_19_25730001 chr3R_25730001 RAL-373_125b 3172 chr3R 25738597 25738651 chr3R 25738725 25738789 4 133 20.0 20.5 20.2 0.2 192 chr3R 25738597 intron LpR2 - chr3R 25738693 intron LpR2 - chr3R 25738789 intron LpR2 - chr3R_4_25735001 chr3R_25735001 RAL-373_125b 3173 chr3R 25742654 25742711 chr3R 25742786 25742823 11 128 18.5 19.0 18.8 0.6 169 chr3R 25742654 intron LpR1 - chr3R 25742738 intron LpR1 - chr3R 25742823 intron LpR1 - chr3R_11_25740001 chr3R_25740001 RAL-373_125b 3174 chr3R 25743922 25743980 chr3R 25744153 25744211 7 229 19.0 15.5 17.2 0.4 289 chr3R 25743922 intron LpR1 - chr3R 25744066 intron LpR1 - chr3R 25744211 intron LpR1 - chr3R_7_25740001 chr3R_25740001 RAL-373_125b 3175 chr3R 25832666 25832704 chr3R 25841893 25841936 roo 17 9228 5.5 10.5 8.0 1.9 9270 chr3R 25832666 exon alpha4GT2 + chr3R 25837301 intron alpha4GT2 + chr3R 25841936 exon alpha4GT2 + chr3R_17_25835001 chr3R_25835001 RAL-373_125b 3176 chr3R 25871054 25871081 chr3R 25871238 25871266 8 184 14.5 12.5 13.5 0.6 212 chr3R 25871054 3` UTR CG5890 + chr3R 25871160 3` UTR CG5890 + chr3R 25871266 3` UTR CG5890 + chr3R_8_25870001 chr3R_25870001 RAL-373_125b 3177 chr3R 25927462 25927535 chr3R 25927594 25927665 7 131 6.5 0.5 3.5 1.6 203 chr3R 25927462 intron CCAP-R - chr3R 25927564 intron CCAP-R - chr3R 25927665 intron CCAP-R - chr3R_7_25925001 chr3R_25925001 RAL-373_125b 3178 chr3R 25962015 25962064 chr3R 25962160 25962210 8 146 22.5 25.0 23.8 0.3 195 chr3R 25962015 5` UTR boss + chr3R 25962112 intron boss + chr3R 25962210 intron boss + chr3R_8_25960001 chr3R_25960001 RAL-373_125b 3179 chr3R 26010135 26010200 chr3R 26010262 26010324 13 120 18.5 15.0 16.8 0.7 189 chr3R 26010135 intergenic not near genes chr3R 26010230 intergenic not near genes chr3R 26010324 intergenic not near genes chr3R_13_26010001 chr3R_26010001 RAL-373_125b 3180 chr3R 26018657 26018685 chr3R 26018779 26018805 7 131 8.0 5.5 6.8 0.9 148 chr3R 26018657 3` UTR CR43643 - chr3R 26018731 3` UTR CR43643 - chr3R 26018805 3` UTR CR43643 - chr3R_7_26015001 chr3R_26015001 RAL-373_125b 3181 chr3R 26038313 26038394 chr3R 26038449 26038529 14 136 17.5 19.5 18.5 0.7 216 chr3R 26038313 intergenic E(spl)m7-HLH + chr3R 26038421 intergenic E(spl)m7-HLH + chr3R 26038529 intergenic not near genes chr3R_14_26035001 chr3R_26035001 RAL-373_125b 3182 chr3R 26038926 26038999 chr3R 26039113 26039180 10 186 10.0 10.0 10.0 0.9 254 chr3R 26038926 intergenic not near genes chr3R 26039053 intergenic not near genes chr3R 26039180 intergenic not near genes chr3R_10_26035001 chr3R_26035001 RAL-373_125b 3183 chr3R 26066357 26066378 chr3R 26066446 26066513 7 126 16.5 17.5 17.0 0.4 156 chr3R 26066357 intergenic not near genes chr3R 26066435 intergenic not near genes chr3R 26066513 intergenic not near genes chr3R_7_26065001 chr3R_26065001 RAL-373_125b 3184 chr3R 26108789 26108830 chr3R 26117410 26117421 Tirant 5 8617 8.5 0.0 4.2 1.0 8632 chr3R 26108789 5` UTR CG31324 + chr3R 26113105 intron CG31324 + chr3R 26117421 intron CG31324 + chr3R_5_26110001 chr3R_26110001 RAL-373_125b 3185 chr3R 26126516 26126543 chr3R 26126641 26126679 4 133 16.0 15.5 15.8 0.2 163 chr3R 26126516 intron CG31324 + chr3R 26126598 intron CG31324 + chr3R 26126679 intron,5` UTR CG31324 +,CG14556 + chr3R_4_26125001 chr3R_26125001 RAL-373_125b 3186 chr3R 26128650 26128710 chr3R 26132973 26133043 6 4333 15.0 38.0 26.5 0.2 4393 chr3R 26128650 intron CG31324 + chr3R 26130846 intergenic CG31324 + chr3R 26133043 intergenic CG6142 + chr3R_6_26130001 chr3R_26130001 RAL-373_125b 3187 chr3R 26137164 26137219 chr3R 26137313 26137368 8 148 10.0 9.0 9.5 0.8 204 chr3R 26137164 intergenic CG6142 + chr3R 26137266 intergenic CG6142 + chr3R 26137368 intergenic CG6142 + chr3R_8_26135001 chr3R_26135001 RAL-373_125b 3188 chr3R 26140483 26140547 chr3R 26140646 26140710 10 161 15.5 12.0 13.8 0.7 227 chr3R 26140483 intergenic not near genes chr3R 26140596 intergenic not near genes chr3R 26140710 intergenic not near genes chr3R_10_26140001 chr3R_26140001 RAL-373_125b 3189 chr3R 26144401 26144474 chr3R 26144529 26144602 7 126 14.0 13.5 13.8 0.5 201 chr3R 26144401 intergenic not near genes chr3R 26144502 intergenic not near genes chr3R 26144602 intergenic not near genes chr3R_7_26140001 chr3R_26140001 RAL-373_125b 3190 chr3R 26166138 26166196 chr3R 26166274 26166332 14 135 14.0 10.0 12.0 1.1 194 chr3R 26166138 intergenic not near genes chr3R 26166235 intergenic not near genes chr3R 26166332 intergenic not near genes chr3R_14_26165001 chr3R_26165001 RAL-373_125b 3191 chr3R 26239778 26239834 chr3R 26240139 26240195 7 360 7.0 7.0 7.0 0.9 417 chr3R 26239778 intron CR42745 + chr3R 26239986 intron CR42745 + chr3R 26240195 intron CR42745 + chr3R_7_26235001 chr3R_26235001 RAL-373_125b 3192 chr3R 26241222 26241264 chr3R 26241363 26241405 5 138 14.0 17.5 15.8 0.3 183 chr3R 26241222 intron CR42745 + chr3R 26241314 intron CR42745 + chr3R 26241405 intron CR42745 + chr3R_5_26240001 chr3R_26240001 RAL-373_125b 3193 chr3R 26294681 26294706 chr3R 26294808 26294834 4 128 12.0 13.5 12.8 0.3 153 chr3R 26294681 intergenic not near genes chr3R 26294758 intergenic not near genes chr3R 26294834 intergenic not near genes chr3R_4_26290001 chr3R_26290001 RAL-373_125b 3194 chr3R 26294707 26294739 chr3R 26294807 26294863 6 118 11.0 13.5 12.2 0.5 156 chr3R 26294707 intergenic not near genes chr3R 26294785 intergenic not near genes chr3R 26294863 intergenic not near genes chr3R_6_26290001 chr3R_26290001 RAL-373_125b 3195 chr3R 26309218 26309263 chr3R 26309513 26309575 4 306 21.5 15.0 18.2 0.2 357 chr3R 26309218 intergenic not near genes chr3R 26309396 intergenic not near genes chr3R 26309575 intergenic not near genes chr3R_4_26305001 chr3R_26305001 RAL-373_125b 3196 chr3R 26325639 26325700 chr3R 26325770 26325833 22 125 4.5 6.0 5.2 3.5 194 chr3R 26325639 intron CG33970 + chr3R 26325736 intron CG33970 + chr3R 26325833 intron CG33970 + chr3R_22_26325001 chr3R_26325001 RAL-373_125b 3197 chr3R 26326646 26326675 chr3R 26326774 26326795 4 124 7.5 5.0 6.2 0.6 149 chr3R 26326646 intron CG33970 + chr3R 26326720 intron CG33970 + chr3R 26326795 intron CG33970 + chr3R_4_26325001 chr3R_26325001 RAL-373_125b 3198 chr3R 26365066 26365134 chr3R 26365201 26365263 7 132 13.5 17.0 15.2 0.4 197 chr3R 26365066 intergenic not near genes chr3R 26365164 intergenic not near genes chr3R 26365263 intergenic not near genes chr3R_7_26365001 chr3R_26365001 RAL-373_125b 3199 chr3R 26376280 26376355 chr3R 26385490 26385579 roo 11 9210 5.0 0.0 2.5 3.1 9299 chr3R 26376280 intergenic not near genes chr3R 26380930 intergenic not near genes chr3R 26385579 intergenic not near genes chr3R_11_26380001 chr3R_26380001 RAL-373_125b 3200 chr3R 26386657 26386719 chr3R 26386894 26386956 6 234 11.0 10.5 10.8 0.5 299 chr3R 26386657 intergenic not near genes chr3R 26386806 intergenic not near genes chr3R 26386956 intergenic not near genes chr3R_6_26385001 chr3R_26385001 RAL-373_125b 3201 chr3R 26405406 26405467 chr3R 26405584 26405645 7 176 4.5 4.5 4.5 1.3 239 chr3R 26405406 intergenic not near genes chr3R 26405526 intergenic not near genes chr3R 26405645 intergenic not near genes chr3R_7_26405001 chr3R_26405001 RAL-373_125b 3202 chr3R 26405883 26405935 chr3R 26405998 26406061 4 123 3.5 5.0 4.2 0.8 178 chr3R 26405883 intergenic not near genes chr3R 26405972 intergenic not near genes chr3R 26406061 intergenic not near genes chr3R_4_26405001 chr3R_26405001 RAL-373_125b 3203 chr3R 26454615 26454672 chr3R 26455033 26455076 8 416 10.0 7.0 8.5 0.8 461 chr3R 26454615 intergenic CG5447 +,CG43117 + chr3R 26454846 exon CG43117 + chr3R 26455076 3` UTR CG43117 + chr3R_8_26450001 chr3R_26450001 RAL-373_125b 3204 chr3R 26492639 26492707 chr3R 26492813 26492878 13 168 12.5 19.0 15.8 0.8 239 chr3R 26492639 intron plum - chr3R 26492758 intron plum - chr3R 26492878 intron plum - chr3R_13_26490001 chr3R_26490001 RAL-373_125b 3205 chr3R 26510480 26510519 chr3R 26519585 26519630 roo 12 9105 2.5 5.5 4.0 2.4 9150 chr3R 26510480 intron plum - chr3R 26515055 intron plum - chr3R 26519630 intron,5` UTR plum -,CR45226 + chr3R_12_26515001 chr3R_26515001 RAL-373_125b 3206 chr3R 26542015 26542062 chr3R 26542146 26542198 17 132 5.0 3.5 4.2 3.3 183 chr3R 26542015 intron scrib + chr3R 26542106 intron scrib + chr3R 26542198 intron scrib + chr3R_17_26540001 chr3R_26540001 RAL-373_125b 3207 chr3R 26558281 26558350 chr3R 26565644 26565707 Stalker4 13 7355 9.0 4.0 6.5 1.7 7426 chr3R 26558281 intron scrib + chr3R 26561994 intron scrib + chr3R 26565707 intron scrib + chr3R_13_26560001 chr3R_26560001 RAL-373_125b 3208 chr3R 26571553 26571607 chr3R 26571671 26571735 8 121 17.5 15.5 16.5 0.5 182 chr3R 26571553 intron scrib + chr3R 26571644 intron scrib + chr3R 26571735 intron scrib + chr3R_8_26570001 chr3R_26570001 RAL-373_125b 3209 chr3R 26604481 26604509 chr3R 26604565 26604592 5 98 18.5 18.0 18.2 0.3 111 chr3R 26604481 intergenic scrib + chr3R 26604536 intergenic scrib + chr3R 26604592 intergenic not near genes chr3R_5_26600001 chr3R_26600001 RAL-373_125b 3210 chr3R 26641590 26641662 chr3R 26641727 26641799 16 131 7.5 8.5 8.0 1.8 209 chr3R 26641590 intergenic not near genes chr3R 26641694 intergenic not near genes chr3R 26641799 intergenic not near genes chr3R_16_26640001 chr3R_26640001 RAL-373_125b 3211 chr3R 26642698 26642744 chr3R 26643142 26643188 jockey 10 443 11.0 7.0 9.0 1.0 490 chr3R 26642698 intergenic not near genes chr3R 26642943 intergenic not near genes chr3R 26643188 intergenic not near genes chr3R_10_26640001 chr3R_26640001 RAL-373_125b 3212 chr3R 26660615 26660671 chr3R 26660729 26660805 12 121 11.0 16.5 13.8 0.8 190 chr3R 26660615 intron beat-VII - chr3R 26660710 intron beat-VII - chr3R 26660805 intron beat-VII - chr3R_12_26660001 chr3R_26660001 RAL-373_125b 3213 chr3R 26668577 26668646 chr3R 26668698 26668770 10 116 16.0 14.0 15.0 0.6 193 chr3R 26668577 intron beat-VII - chr3R 26668674 intron beat-VII - chr3R 26668770 intron beat-VII - chr3R_10_26665001 chr3R_26665001 RAL-373_125b 3214 chr3R 26669635 26669689 chr3R 26669767 26669806 10 128 8.5 11.0 9.8 0.9 171 chr3R 26669635 intron beat-VII - chr3R 26669720 intron beat-VII - chr3R 26669806 intron beat-VII - chr3R_10_26665001 chr3R_26665001 RAL-373_125b 3215 chr3R 26671930 26671967 chr3R 26672056 26672105 7 134 9.0 15.0 12.0 0.5 175 chr3R 26671930 intron beat-VII - chr3R 26672018 intron beat-VII - chr3R 26672105 intron beat-VII - chr3R_7_26670001 chr3R_26670001 RAL-373_125b 3216 chr3R 26682597 26682640 chr3R 26682769 26682812 14 170 14.5 11.5 13.0 1.0 215 chr3R 26682597 intergenic not near genes chr3R 26682704 intergenic not near genes chr3R 26682812 intergenic not near genes chr3R_14_26680001 chr3R_26680001 RAL-373_125b 3217 chr3R 26685846 26685866 chr3R 26686035 26686096 8 212 20.0 17.0 18.5 0.4 250 chr3R 26685846 intergenic not near genes chr3R 26685971 intergenic not near genes chr3R 26686096 intergenic not near genes chr3R_8_26685001 chr3R_26685001 RAL-373_125b 3218 chr3R 26740911 26740978 chr3R 26741039 26741098 5 127 13.5 13.0 13.2 0.4 187 chr3R 26740911 intergenic not near genes chr3R 26741004 intergenic not near genes chr3R 26741098 intergenic not near genes chr3R_5_26740001 chr3R_26740001 RAL-373_125b 3219 chr3R 26770205 26770250 chr3R 26770332 26770377 8 125 15.5 12.5 14.0 0.5 172 chr3R 26770205 intergenic CR45563 + chr3R 26770291 intergenic CR45563 + chr3R 26770377 intergenic not near genes chr3R_8_26770001 chr3R_26770001 RAL-373_125b 3220 chr3R 26810504 26810570 chr3R 26811039 26811100 roo 8 534 7.0 4.0 5.5 1.2 596 chr3R 26810504 intron Tl + chr3R 26810802 intron Tl + chr3R 26811100 intron Tl + chr3R_8_26810001 chr3R_26810001 RAL-373_125b 3221 chr3R 26848024 26848063 chr3R 26848146 26848189 4 125 10.5 13.0 11.8 0.3 165 chr3R 26848024 intron Lerp - chr3R 26848106 intron Lerp - chr3R 26848189 intron Lerp - chr3R_4_26845001 chr3R_26845001 RAL-373_125b 3222 chr3R 26852450 26852467 chr3R 26852580 26852602 6 134 10.5 10.0 10.2 0.5 152 chr3R 26852450 intron Lerp - chr3R 26852526 intron Lerp - chr3R 26852602 intron Lerp - chr3R_6_26850001 chr3R_26850001 RAL-373_125b 3223 chr3R 26888177 26888186 chr3R 26888298 26888308 5 124 17.0 19.0 18.0 0.3 131 chr3R 26888177 intron T48 + chr3R 26888242 intron T48 + chr3R 26888308 intron T48 + chr3R_5_26885001 chr3R_26885001 RAL-373_125b 3224 chr3R 26940954 26940979 chr3R 26941262 26941292 5 310 7.0 10.0 8.5 0.5 338 chr3R 26940954 intron sda + chr3R 26941123 intron sda + chr3R 26941292 intron sda + chr3R_5_26940001 chr3R_26940001 RAL-373_125b 3225 chr3R 26955105 26955166 chr3R 26955465 26955530 9 359 17.0 12.0 14.5 0.6 425 chr3R 26955105 intron CG6330 - chr3R 26955318 intron CG6330 - chr3R 26955530 intron CG6330 - chr3R_9_26955001 chr3R_26955001 RAL-373_125b 3226 chr3R 27007374 27007438 chr3R 27016547 27016617 roo 12 9182 4.5 6.5 5.5 1.8 9243 chr3R 27007374 intron RYa-R + chr3R 27011996 intron RYa-R + chr3R 27016617 intron RYa-R + chr3R_12_27010001 chr3R_27010001 RAL-373_125b 3227 chr3R 27019476 27019526 chr3R 27019622 27019666 5 138 16.0 20.5 18.2 0.3 190 chr3R 27019476 intron,exon RYa-R +,CG17191 - chr3R 27019571 intron,exon RYa-R +,CG17191 - chr3R 27019666 intron,intron RYa-R +,CG17191 - chr3R_5_27015001 chr3R_27015001 RAL-373_125b 3228 chr3R 27027651 27027693 chr3R 27027785 27027825 9 129 9.5 1.5 5.5 1.4 174 chr3R 27027651 intron RYa-R + chr3R 27027738 intron RYa-R + chr3R 27027825 intron RYa-R + chr3R_9_27025001 chr3R_27025001 RAL-373_125b 3229 chr3R 27028683 27028754 chr3R 27028807 27028883 14 127 4.5 4.0 4.2 2.7 200 chr3R 27028683 intron RYa-R + chr3R 27028783 intron RYa-R + chr3R 27028883 intron RYa-R + chr3R_14_27025001 chr3R_27025001 RAL-373_125b 3230 chr3R 27091514 27091545 chr3R 27091643 27091659 4 124 21.0 9.0 15.0 0.2 145 chr3R 27091514 intergenic Cpr97Eb - chr3R 27091586 intergenic Cpr97Eb - chr3R 27091659 intergenic not near genes chr3R_4_27090001 chr3R_27090001 RAL-373_125b 3231 chr3R 27133470 27133539 chr3R 27133637 27133706 18 167 4.0 2.0 3.0 4.5 236 chr3R 27133470 intron CG6051 - chr3R 27133588 intron CG6051 - chr3R 27133706 intron CG6051 - chr3R_18_27130001 chr3R_27130001 RAL-373_125b 3232 chr3R 27140470 27140541 chr3R 27148130 27148181 412 22 7657 3.5 5.5 4.5 4.0 7711 chr3R 27140470 intron CG6051 - chr3R 27144326 intron CG6051 - chr3R 27148181 intron CG6051 - chr3R_22_27140001 chr3R_27140001 RAL-373_125b 3233 chr3R 27227546 27227564 chr3R 27227675 27227693 4 129 16.0 14.0 15.0 0.2 147 chr3R 27227546 3` UTR CG42813 - chr3R 27227620 3` UTR CG42813 - chr3R 27227693 3` UTR CG42813 - chr3R_4_27225001 chr3R_27225001 RAL-373_125b 3234 chr3R 27227575 27227610 chr3R 27227674 27227713 9 108 12.5 14.0 13.2 0.6 138 chr3R 27227575 3` UTR CG42813 - chr3R 27227644 3` UTR CG42813 - chr3R 27227713 exon CG42813 - chr3R_9_27225001 chr3R_27225001 RAL-373_125b 3235 chr3R 27275804 27275866 chr3R 27275938 27276000 12 134 13.0 10.0 11.5 1.0 196 chr3R 27275804 intron CG5938 + chr3R 27275902 intron CG5938 + chr3R 27276000 intron CG5938 + chr3R_12_27275001 chr3R_27275001 RAL-373_125b 3236 chr3R 27292274 27292307 chr3R 27292402 27292424 5 128 14.5 11.0 12.8 0.4 150 chr3R 27292274 intergenic CG3348 - chr3R 27292349 intergenic CG3348 - chr3R 27292424 intergenic CG3348 - chr3R_5_27290001 chr3R_27290001 RAL-373_125b 3237 chr3R 27299711 27299716 chr3R 27299820 27299848 4 118 14.0 16.5 15.2 0.2 137 chr3R 27299711 intron CG3339 - chr3R 27299780 intron CG3339 - chr3R 27299848 intron CG3339 - chr3R_4_27295001 chr3R_27295001 RAL-373_125b 3238 chr3R 27299723 27299726 chr3R 27299812 27299843 4 108 14.5 17.0 15.8 0.2 120 chr3R 27299723 intron CG3339 - chr3R 27299783 intron CG3339 - chr3R 27299843 intron CG3339 - chr3R_4_27295001 chr3R_27295001 RAL-373_125b 3239 chr3R 27300486 27300499 chr3R 27300603 27300626 4 124 14.5 18.5 16.5 0.2 140 chr3R 27300486 intron CG3339 - chr3R 27300556 intron CG3339 - chr3R 27300626 intron CG3339 - chr3R_4_27300001 chr3R_27300001 RAL-373_125b 3240 chr3R 27316621 27316678 chr3R 27316831 27316868 7 206 12.5 12.0 12.2 0.5 247 chr3R 27316621 exon CG3339 - chr3R 27316744 intron CG3339 - chr3R 27316868 intron CG3339 - chr3R_7_27315001 chr3R_27315001 RAL-373_125b 3241 chr3R 27327414 27327455 chr3R 27327528 27327577 10 119 10.0 12.0 11.0 0.8 163 chr3R 27327414 intergenic not near genes chr3R 27327496 intergenic not near genes chr3R 27327577 intergenic not near genes chr3R_10_27325001 chr3R_27325001 RAL-373_125b 3242 chr3R 27329425 27329496 chr3R 27329552 27329618 14 125 3.5 3.5 3.5 3.1 193 chr3R 27329425 intergenic CG3330 - chr3R 27329522 intergenic CG3330 - chr3R 27329618 intergenic CG3330 - chr3R_14_27325001 chr3R_27325001 RAL-373_125b 3243 chr3R 27342757 27342820 chr3R 27351388 27351451 Tirant 16 8626 5.5 4.5 5.0 2.7 8694 chr3R 27342757 intron CG42534 + chr3R 27347104 intron CG42534 + chr3R 27351451 intron CG42534 + chr3R_16_27345001 chr3R_27345001 RAL-373_125b 3244 chr3R 27377451 27377498 chr3R 27377568 27377616 6 127 10.0 8.5 9.2 0.6 165 chr3R 27377451 3` UTR side - chr3R 27377534 3` UTR side - chr3R 27377616 3` UTR side - chr3R_6_27375001 chr3R_27375001 RAL-373_125b 3245 chr3R 27452540 27452610 chr3R 27452770 27452824 7 224 16.5 15.0 15.8 0.4 284 chr3R 27452540 intergenic not near genes chr3R 27452682 intergenic not near genes chr3R 27452824 intergenic not near genes chr3R_7_27450001 chr3R_27450001 RAL-373_125b 3246 chr3R 27496541 27496602 chr3R 27496696 27496757 6 155 16.5 9.5 13.0 0.4 216 chr3R 27496541 intergenic not near genes chr3R 27496649 intergenic not near genes chr3R 27496757 intergenic not near genes chr3R_6_27495001 chr3R_27495001 RAL-373_125b 3247 chr3R 27521122 27521182 chr3R 27530381 27530436 roo 9 9258 2.5 2.5 2.5 2.6 9314 chr3R 27521122 intron CG12885 + chr3R 27525779 intron CG12885 + chr3R 27530436 intron CG12885 + chr3R_9_27525001 chr3R_27525001 RAL-373_125b 3248 chr3R 27619690 27619728 chr3R 27619840 27619873 8 144 14.5 20.5 17.5 0.4 183 chr3R 27619690 intron Tusp + chr3R 27619782 intron Tusp + chr3R 27619873 intron Tusp + chr3R_8_27615001 chr3R_27615001 RAL-373_125b 3249 chr3R 27627051 27627115 chr3R 27627199 27627250 10 145 6.0 6.5 6.2 1.4 199 chr3R 27627051 intron Tusp + chr3R 27627150 intron Tusp + chr3R 27627250 intron Tusp + chr3R_10_27625001 chr3R_27625001 RAL-373_125b 3250 chr3R 27644218 27644274 chr3R 27644342 27644416 8 136 12.0 13.0 12.5 0.6 198 chr3R 27644218 intron tau - chr3R 27644317 intron tau - chr3R 27644416 intron tau - chr3R_8_27640001 chr3R_27640001 RAL-373_125b 3251 chr3R 27705321 27705386 chr3R 27705451 27705495 8 122 16.0 15.5 15.8 0.5 174 chr3R 27705321 exon CG12428 - chr3R 27705408 intron CG12428 - chr3R 27705495 exon CG12428 - chr3R_8_27705001 chr3R_27705001 RAL-373_125b 3252 chr3R 27706737 27706773 chr3R 27706864 27706900 4 127 10.0 6.0 8.0 0.4 163 chr3R 27706737 5` UTR CG12428 - chr3R 27706818 intergenic CG12428 -,CG12877 + chr3R 27706900 intergenic CG12428 -,CG12877 + chr3R_4_27705001 chr3R_27705001 RAL-373_125b 3253 chr3R 27725537 27725585 chr3R 27731023 27731077 I-element 9 5490 7.0 8.0 7.5 1.1 5540 chr3R 27725537 intergenic not near genes chr3R 27728307 intergenic not near genes chr3R 27731077 intergenic not near genes chr3R_9_27725001 chr3R_27725001 RAL-373_125b 3254 chr3R 27731162 27731224 chr3R 27731281 27731337 13 116 12.5 16.5 14.5 0.8 175 chr3R 27731162 intergenic not near genes chr3R 27731250 intergenic not near genes chr3R 27731337 intergenic not near genes chr3R_13_27730001 chr3R_27730001 RAL-373_125b 3255 chr3R 27779252 27779273 chr3R 27779361 27779389 6 119 4.0 5.0 4.5 1.1 137 chr3R 27779252 exon CG34353 - chr3R 27779320 intron CG34353 - chr3R 27779389 intron CG34353 - chr3R_6_27775001 chr3R_27775001 RAL-373_125b 3256 chr3R 27799898 27799936 chr3R 27800030 27800068 6 132 18.5 16.0 17.2 0.3 170 chr3R 27799898 intron CG34353 - chr3R 27799983 intron CG34353 - chr3R 27800068 intron CG34353 - chr3R_6_27795001 chr3R_27795001 RAL-373_125b 3257 chr3R 27812387 27812461 chr3R 27812514 27812546 10 117 13.0 13.5 13.2 0.7 159 chr3R 27812387 intron CG34353 - chr3R 27812466 intron CG34353 - chr3R 27812546 intron CG34353 - chr3R_10_27810001 chr3R_27810001 RAL-373_125b 3258 chr3R 27856723 27856770 chr3R 27858256 27858303 hopper2 12 1532 7.0 6.5 6.8 1.5 1580 chr3R 27856723 intron CG34353 - chr3R 27857513 intron CG34353 - chr3R 27858303 intron CG34353 - chr3R_12_27855001 chr3R_27855001 RAL-373_125b 3259 chr3R 27862927 27862981 chr3R 27868271 27868347 Transpac 10 5355 5.0 2.5 3.8 2.1 5420 chr3R 27862927 intron CG34353 - chr3R 27865637 intron CG34353 - chr3R 27868347 intron CG34353 - chr3R_10_27865001 chr3R_27865001 RAL-373_125b 3260 chr3R 27875658 27875729 chr3R 27882763 27882814 297 17 7102 5.5 7.0 6.2 2.4 7156 chr3R 27875658 intron CG34353 - chr3R 27879236 intron CG34353 - chr3R 27882814 intron CG34353 - chr3R_17_27875001 chr3R_27875001 RAL-373_125b 3261 chr3R 27911200 27911260 chr3R 27911328 27911388 12 126 15.0 13.5 14.2 0.8 188 chr3R 27911200 intergenic not near genes chr3R 27911294 intergenic not near genes chr3R 27911388 intergenic not near genes chr3R_12_27910001 chr3R_27910001 RAL-373_125b 3262 chr3R 28017941 28017973 chr3R 28018047 28018105 7 131 8.0 4.5 6.2 1.0 164 chr3R 28017941 intergenic not near genes chr3R 28018023 intergenic not near genes chr3R 28018105 intergenic not near genes chr3R_7_28015001 chr3R_28015001 RAL-373_125b 3263 chr3R 28035450 28035514 chr3R 28035566 28035623 13 123 3.0 7.5 5.2 2.1 173 chr3R 28035450 intron CG34362 + chr3R 28035536 intron CG34362 + chr3R 28035623 intron CG34362 + chr3R_13_28035001 chr3R_28035001 RAL-373_125b 3264 chr3R 28043826 28043881 chr3R 28043991 28044046 5 161 8.0 14.5 11.2 0.4 220 chr3R 28043826 intron CG34362 + chr3R 28043936 intron CG34362 + chr3R 28044046 intron CG34362 + chr3R_5_28040001 chr3R_28040001 RAL-373_125b 3265 chr3R 28068450 28068510 chr3R 28073942 28074002 I-element 13 5488 3.0 5.0 4.0 2.6 5552 chr3R 28068450 intron CG34362 + chr3R 28071226 intron CG34362 + chr3R 28074002 intron CG34362 + chr3R_13_28070001 chr3R_28070001 RAL-373_125b 3266 chr3R 28103290 28103353 chr3R 28103426 28103472 5 134 8.0 10.0 9.0 0.5 182 chr3R 28103290 intergenic not near genes chr3R 28103381 intergenic not near genes chr3R 28103472 intergenic not near genes chr3R_5_28100001 chr3R_28100001 RAL-373_125b 3267 chr3R 28115463 28115532 chr3R 28115589 28115658 12 124 16.5 15.0 15.8 0.7 195 chr3R 28115463 intergenic not near genes chr3R 28115560 intergenic not near genes chr3R 28115658 intergenic not near genes chr3R_12_28115001 chr3R_28115001 RAL-373_125b 3268 chr3R 28131390 28131440 chr3R 28131623 28131672 7 232 8.5 14.0 11.2 0.6 282 chr3R 28131390 intergenic not near genes chr3R 28131531 intergenic not near genes chr3R 28131672 intergenic not near genes chr3R_7_28130001 chr3R_28130001 RAL-373_125b 3269 chr3R 28137655 28137704 chr3R 28137775 28137828 7 125 14.5 15.5 15.0 0.4 173 chr3R 28137655 intergenic not near genes chr3R 28137742 intergenic not near genes chr3R 28137828 intergenic not near genes chr3R_7_28135001 chr3R_28135001 RAL-373_125b 3270 chr3R 28152315 28152354 chr3R 28152442 28152476 6 125 10.0 11.5 10.8 0.5 161 chr3R 28152315 intron CG34354 + chr3R 28152396 intron CG34354 + chr3R 28152476 intron CG34354 + chr3R_6_28150001 chr3R_28150001 RAL-373_125b 3271 chr3R 28164842 28164892 chr3R 28164970 28165020 4 128 8.5 7.0 7.8 0.5 178 chr3R 28164842 intron CG34354 + chr3R 28164931 intron CG34354 + chr3R 28165020 intron CG34354 + chr3R_4_28160001 chr3R_28160001 RAL-373_125b 3272 chr3R 28172945 28172979 chr3R 28173147 28173177 4 203 3.0 4.5 3.8 0.8 232 chr3R 28172945 intron CG34354 + chr3R 28173061 intron CG34354 + chr3R 28173177 intron CG34354 + chr3R_4_28170001 chr3R_28170001 RAL-373_125b 3273 chr3R 28173627 28173688 chr3R 28181107 28181163 mdg1 7 7479 5.0 3.0 4.0 1.4 7536 chr3R 28173627 intron CG34354 + chr3R 28177395 intron CG34354 + chr3R 28181163 intron CG34354 + chr3R_7_28175001 chr3R_28175001 RAL-373_125b 3274 chr3R 28253294 28253358 chr3R 28255854 28255918 jockey 9 2556 7.0 6.5 6.8 1.2 2624 chr3R 28253294 intergenic not near genes chr3R 28254606 intergenic not near genes chr3R 28255918 intergenic not near genes chr3R_9_28250001 chr3R_28250001 RAL-373_125b 3275 chr3R 28262651 28262681 chr3R 28262777 28262807 7 125 10.0 15.0 12.5 0.5 156 chr3R 28262651 intergenic CG43125 - chr3R 28262729 intergenic CG43125 - chr3R 28262807 exon CG43125 - chr3R_7_28260001 chr3R_28260001 RAL-373_125b 3276 chr3R 28302066 28302115 chr3R 28302558 28302607 jockey 11 492 11.0 8.0 9.5 1.0 541 chr3R 28302066 intergenic not near genes chr3R 28302336 intergenic not near genes chr3R 28302607 intergenic not near genes chr3R_11_28300001 chr3R_28300001 RAL-373_125b 3277 chr3R 28310874 28310936 chr3R 28311243 28311292 12 364 21.0 15.0 18.0 0.6 418 chr3R 28310874 intergenic not near genes chr3R 28311083 intergenic not near genes chr3R 28311292 intergenic not near genes chr3R_12_28310001 chr3R_28310001 RAL-373_125b 3278 chr3R 28345622 28345673 chr3R 28345728 28345799 9 123 7.0 9.5 8.2 1.0 177 chr3R 28345622 intergenic Moca-cyp + chr3R 28345710 intergenic not near genes chr3R 28345799 intergenic not near genes chr3R_9_28345001 chr3R_28345001 RAL-373_125b 3279 chr3R 28393669 28393713 chr3R 28393819 28393863 7 148 21.5 18.0 19.8 0.3 194 chr3R 28393669 intergenic not near genes chr3R 28393766 intergenic not near genes chr3R 28393863 intergenic not near genes chr3R_7_28390001 chr3R_28390001 RAL-373_125b 3280 chr3R 28406545 28406605 chr3R 28406872 28406932 6 324 12.0 17.0 14.5 0.4 387 chr3R 28406545 intergenic not near genes chr3R 28406738 intergenic not near genes chr3R 28406932 intergenic not near genes chr3R_6_28405001 chr3R_28405001 RAL-373_125b 3281 chr3R 28411093 28411137 chr3R 28411214 28411262 7 124 9.0 5.0 7.0 0.9 169 chr3R 28411093 intergenic not near genes chr3R 28411178 intergenic not near genes chr3R 28411262 intergenic not near genes chr3R_7_28410001 chr3R_28410001 RAL-373_125b 3282 chr3R 28413842 28413864 chr3R 28413959 28413992 6 123 14.5 17.5 16.0 0.4 150 chr3R 28413842 intergenic not near genes chr3R 28413917 intergenic not near genes chr3R 28413992 intergenic not near genes chr3R_6_28410001 chr3R_28410001 RAL-373_125b 3283 chr3R 28415689 28415758 chr3R 28415824 28415886 8 133 13.0 15.0 14.0 0.5 197 chr3R 28415689 intergenic not near genes chr3R 28415788 intergenic not near genes chr3R 28415886 intergenic not near genes chr3R_8_28415001 chr3R_28415001 RAL-373_125b 3284 chr3R 28421643 28421668 chr3R 28421751 28421806 12 120 19.0 13.5 16.2 0.7 163 chr3R 28421643 intron beat-VI + chr3R 28421724 intron beat-VI + chr3R 28421806 intron beat-VI + chr3R_12_28420001 chr3R_28420001 RAL-373_125b 3285 chr3R 28478425 28478517 chr3R 28478500 28478633 9 114 9.0 9.0 9.0 0.9 208 chr3R 28478425 intergenic not near genes chr3R 28478529 intergenic not near genes chr3R 28478633 intergenic not near genes chr3R_9_28475001 chr3R_28475001 RAL-373_125b 3286 chr3R 28479104 28479157 chr3R 28479237 28479285 5 130 16.0 18.5 17.2 0.3 181 chr3R 28479104 intergenic not near genes chr3R 28479194 intergenic not near genes chr3R 28479285 intergenic not near genes chr3R_5_28475001 chr3R_28475001 RAL-373_125b 3287 chr3R 28480275 28480467 chr3R 28480405 28480621 20 135 11.5 4.0 7.8 2.3 346 chr3R 28480275 intergenic not near genes chr3R 28480448 intergenic not near genes chr3R 28480621 intergenic not near genes chr3R_20_28480001 chr3R_28480001 RAL-373_125b 3288 chr3R 28484354 28484410 chr3R 28486226 28486287 47 1872 62.0 84.0 73.0 0.6 1933 chr3R 28484354 intergenic CG1894 + chr3R 28485320 exon CG1894 + chr3R 28486287 intergenic CG1894 + chr3R_47_28485001 chr3R_28485001 RAL-373_125b 3289 chr3R 28558159 28558217 chr3R 28558295 28558347 6 133 19.5 22.0 20.8 0.3 188 chr3R 28558159 intergenic not near genes chr3R 28558253 intergenic not near genes chr3R 28558347 intergenic not near genes chr3R_6_28555001 chr3R_28555001 RAL-373_125b 3290 chr3R 28565934 28565979 chr3R 28566056 28566097 7 119 6.0 10.0 8.0 0.8 163 chr3R 28565934 intergenic not near genes chr3R 28566016 intergenic not near genes chr3R 28566097 intergenic not near genes chr3R_7_28565001 chr3R_28565001 RAL-373_125b 3291 chr3R 28591737 28591803 chr3R 28591860 28591915 6 124 18.5 15.0 16.8 0.3 178 chr3R 28591737 intergenic MRE23 + chr3R 28591826 intergenic MRE23 + chr3R 28591915 intergenic not near genes chr3R_6_28590001 chr3R_28590001 RAL-373_125b 3292 chr3R 28599352 28599386 chr3R 28599542 28599583 6 196 17.0 12.5 14.8 0.4 231 chr3R 28599352 intergenic Noa36 - chr3R 28599468 intergenic Noa36 - chr3R 28599583 intergenic Noa36 - chr3R_6_28595001 chr3R_28595001 RAL-373_125b 3293 chr3R 28633158 28633211 chr3R 28633278 28633341 12 126 16.0 18.0 17.0 0.7 183 chr3R 28633158 intron CG10011 - chr3R 28633250 intron CG10011 - chr3R 28633341 intron CG10011 - chr3R_12_28630001 chr3R_28630001 RAL-373_125b 3294 chr3R 28758272 28758310 chr3R 28771329 28771367 Stalker4 13 13057 4.5 4.0 4.2 2.5 13095 chr3R 28758272 intergenic aqrs - chr3R 28764820 intergenic not near genes chr3R 28771367 intergenic not near genes chr3R_13_28760001 chr3R_28760001 RAL-373_125b 3295 chr3R 28792808 28792899 chr3R 28797964 28798026 jockey 13 5131 1.5 4.5 3.0 3.2 5218 chr3R 28792808 intergenic not near genes chr3R 28795417 intergenic not near genes chr3R 28798026 intergenic not near genes chr3R_13_28795001 chr3R_28795001 RAL-373_125b 3296 chr3R 28811526 28811601 chr3R 28811722 28811797 7 196 6.5 1.5 4.0 1.4 271 chr3R 28811526 intergenic wdn - chr3R 28811662 intergenic wdn -,CG1646 + chr3R 28811797 intergenic CG1646 +,wdn - chr3R_7_28810001 chr3R_28810001 RAL-373_125b 3297 chr3R 21907534 21907536 chr3R 28831799 28831802 72 6924266 26.0 22.0 24.0 2.9 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_72_25365001 chr3R_25365001 RAL-373_125b 3298 chr3R 28850734 28850746 chr3R 28850864 28850865 6 127 6.0 10.0 8.0 0.7 131 chr3R 28850734 intron spg + chr3R 28850800 intron spg + chr3R 28850865 intron spg + chr3R_6_28850001 chr3R_28850001 RAL-373_125b 3299 chr3R 28870601 28870648 chr3R 28870724 28870781 9 131 21.5 27.5 24.5 0.4 180 chr3R 28870601 intergenic CG33203 -,spg + chr3R 28870691 3` UTR CG33203 - chr3R 28870781 3` UTR CG33203 - chr3R_9_28870001 chr3R_28870001 RAL-373_125b 3300 chr3R 28985024 28985088 chr3R 28985176 28985237 8 152 3.0 4.5 3.8 1.7 213 chr3R 28985024 intergenic not near genes chr3R 28985130 intergenic not near genes chr3R 28985237 intergenic not near genes chr3R_8_28985001 chr3R_28985001 RAL-373_125b 3301 chr3R 28988959 28989000 chr3R 28989088 28989129 4 130 9.0 9.0 9.0 0.4 170 chr3R 28988959 intergenic not near genes chr3R 28989044 intergenic not near genes chr3R 28989129 intergenic not near genes chr3R_4_28985001 chr3R_28985001 RAL-373_125b 3302 chr3R 29023872 29023924 chr3R 29023975 29024035 8 118 14.5 15.0 14.8 0.5 163 chr3R 29023872 5` UTR CR45567 + chr3R 29023954 5` UTR CR45567 + chr3R 29024035 5` UTR CR45567 + chr3R_8_29020001 chr3R_29020001 RAL-373_125b 3303 chr3R 29032699 29032775 chr3R 29032826 29032900 7 122 18.0 19.0 18.5 0.4 201 chr3R 29032699 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032800 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032900 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R_7_29030001 chr3R_29030001 RAL-373_125b 3304 chr3R 29070015 29070073 chr3R 29070146 29070204 11 130 20.0 15.5 17.8 0.6 189 chr3R 29070015 intron CG11873 + chr3R 29070110 intron CG11873 + chr3R 29070204 intron CG11873 + chr3R_11_29070001 chr3R_29070001 RAL-373_125b 3305 chr3R 29079361 29079406 chr3R 29080782 29080828 NOF 9 1421 5.0 4.0 4.5 1.6 1467 chr3R 29079361 intron CG11873 + chr3R 29080094 intron CG11873 + chr3R 29080828 intron CG11873 + chr3R_9_29080001 chr3R_29080001 RAL-373_125b 3306 chr3R 29128509 29128516 chr3R 29128649 29128663 5 146 0.0 13.5 6.8 0.6 154 chr3R 29128509 intergenic dgt6 -,CG11880 + chr3R 29128586 3` UTR dgt6 - chr3R 29128663 3` UTR dgt6 - chr3R_5_29125001 chr3R_29125001 RAL-373_125b 3307 chr3R 29141529 29141549 chr3R 29141658 29141678 5 128 7.5 20.0 13.8 0.3 149 chr3R 29141529 intron CG14516 + chr3R 29141604 intron CG14516 + chr3R 29141678 intron CG14516 + chr3R_5_29140001 chr3R_29140001 RAL-373_125b 3308 chr3R 29213015 29213084 chr3R 29213148 29213220 31 131 7.0 6.5 6.8 4.0 205 chr3R 29213015 intergenic not near genes chr3R 29213118 intergenic not near genes chr3R 29213220 intergenic not near genes chr3R_31_29210001 chr3R_29210001 RAL-373_125b 3309 chr3R 29237230 29237238 chr3R 29239301 29239304 4 2070 36.0 13.5 24.8 0.2 2074 chr3R 29237230 exon CG11951 - chr3R 29238267 intron CG11951 - chr3R 29239304 exon CG31427 - chr3R_4_29235001 chr3R_29235001 RAL-373_125b 3310 chr3R 29237240 29237250 chr3R 29239283 29239321 7 2063 35.5 6.0 20.8 0.3 2081 chr3R 29237240 exon CG11951 - chr3R 29238280 intron CG11951 - chr3R 29239321 exon CG31427 - chr3R_7_29235001 chr3R_29235001 RAL-373_125b 3311 chr3R 29237256 29237535 chr3R 29239272 29239470 8 2008 19.0 5.0 12.0 0.6 2214 chr3R 29237256 exon CG11951 - chr3R 29238363 intron CG11951 - chr3R 29239470 exon CG31427 - chr3R_8_29235001 chr3R_29235001 RAL-373_125b 3312 chr3R 29239221 29239245 chr3R 29245520 29245576 9 6328 3.5 30.5 17.0 0.5 6355 chr3R 29239221 exon CG31427 - chr3R 29242398 exon CG31445 - chr3R 29245576 exon SP1029 - chr3R_9_29240001 chr3R_29240001 RAL-373_125b 3313 chr3R 29237522 29237532 chr3R 29239380 29239390 5 1858 19.0 20.5 19.8 0.2 1868 chr3R 29237522 exon CG11951 - chr3R 29238456 intron CG11951 - chr3R 29239390 intron CG31427 - chr3R_5_29235001 chr3R_29235001 RAL-373_125b 3314 chr3R 29305940 29305993 chr3R 29306066 29306122 5 126 15.0 11.0 13.0 0.4 182 chr3R 29305940 intergenic not near genes chr3R 29306031 intergenic not near genes chr3R 29306122 intergenic not near genes chr3R_5_29305001 chr3R_29305001 RAL-373_125b 3315 chr3R 29319779 29319840 chr3R 29320148 29320198 jockey 9 368 2.5 5.5 4.0 1.8 419 chr3R 29319779 intergenic Cnx99A - chr3R 29319988 intergenic Cnx99A - chr3R 29320198 intergenic not near genes chr3R_9_29315001 chr3R_29315001 RAL-373_125b 3316 chr3R 29332239 29332265 chr3R 29332361 29332382 9 125 12.5 2.0 7.2 1.1 143 chr3R 29332239 intergenic not near genes chr3R 29332310 intergenic not near genes chr3R 29332382 intergenic not near genes chr3R_9_29330001 chr3R_29330001 RAL-373_125b 3317 chr3R 29376312 29376364 chr3R 29376450 29376496 7 134 12.5 12.0 12.2 0.5 184 chr3R 29376312 intergenic not near genes chr3R 29376404 intergenic not near genes chr3R 29376496 intergenic not near genes chr3R_7_29375001 chr3R_29375001 RAL-373_125b 3318 chr3R 29415613 29415638 chr3R 29415766 29415798 6 148 35.0 25.0 30.0 0.2 185 chr3R 29415613 intron Ptp99A + chr3R 29415706 intron Ptp99A + chr3R 29415798 intron Ptp99A + chr3R_6_29415001 chr3R_29415001 RAL-373_125b 3319 chr3R 29420058 29420081 chr3R 29420197 29420220 5 137 11.0 10.5 10.8 0.4 162 chr3R 29420058 intron Ptp99A + chr3R 29420139 intron Ptp99A + chr3R 29420220 intron Ptp99A + chr3R_5_29420001 chr3R_29420001 RAL-373_125b 3320 chr3R 29429756 29429781 chr3R 29429884 29429889 4 123 13.5 19.5 16.5 0.2 133 chr3R 29429756 intron Ptp99A + chr3R 29429822 intron Ptp99A + chr3R 29429889 intron Ptp99A + chr3R_4_29425001 chr3R_29425001 RAL-373_125b 3321 chr3R 29449317 29449390 chr3R 29449445 29449462 13 119 12.0 12.5 12.2 1.0 145 chr3R 29449317 intron Ptp99A + chr3R 29449390 intron Ptp99A + chr3R 29449462 intron Ptp99A + chr3R_13_29445001 chr3R_29445001 RAL-373_125b 3322 chr3R 29451981 29452161 chr3R 29452129 29452263 14 137 7.0 6.5 6.8 1.8 282 chr3R 29451981 intron Ptp99A + chr3R 29452122 intron Ptp99A + chr3R 29452263 intron Ptp99A + chr3R_14_29450001 chr3R_29450001 RAL-373_125b 3323 chr3R 29453686 29453777 chr3R 29453829 29453897 9 134 9.5 12.5 11.0 0.8 211 chr3R 29453686 intron Ptp99A + chr3R 29453792 intron Ptp99A + chr3R 29453897 intron Ptp99A + chr3R_9_29450001 chr3R_29450001 RAL-373_125b 3324 chr3R 29471983 29472007 chr3R 29472111 29472150 7 138 11.0 11.5 11.2 0.6 167 chr3R 29471983 intron Ptp99A + chr3R 29472066 intron Ptp99A + chr3R 29472150 intron Ptp99A + chr3R_7_29470001 chr3R_29470001 RAL-373_125b 3325 chr3R 29505854 29505921 chr3R 29505981 29506033 12 126 5.0 5.0 5.0 2.0 179 chr3R 29505854 intergenic not near genes chr3R 29505944 intergenic not near genes chr3R 29506033 intergenic not near genes chr3R_12_29505001 chr3R_29505001 RAL-373_125b 3326 chr3R 29539381 29539411 chr3R 29539507 29539531 7 124 15.0 11.0 13.0 0.5 150 chr3R 29539381 intergenic not near genes chr3R 29539456 intergenic not near genes chr3R 29539531 intergenic not near genes chr3R_7_29535001 chr3R_29535001 RAL-373_125b 3327 chr3R 29570776 29570816 chr3R 29570919 29570934 6 134 15.0 9.5 12.2 0.5 158 chr3R 29570776 intergenic not near genes chr3R 29570855 intergenic not near genes chr3R 29570934 intergenic not near genes chr3R_6_29570001 chr3R_29570001 RAL-373_125b 3328 chr3R 29576732 29577005 chr3R 29576871 29577121 10 126 5.5 2.0 3.8 2.1 389 chr3R 29576732 intergenic not near genes chr3R 29576926 intergenic not near genes chr3R 29577121 intergenic not near genes chr3R_10_29575001 chr3R_29575001 RAL-373_125b 3329 chr3R 29609129 29609186 chr3R 29609268 29609310 6 135 11.0 8.0 9.5 0.6 181 chr3R 29609129 intron alph + chr3R 29609220 intron alph + chr3R 29609310 intron alph + chr3R_6_29605001 chr3R_29605001 RAL-373_125b 3330 chr3R 29621234 29621250 chr3R 29621353 29621372 5 122 17.0 10.0 13.5 0.3 138 chr3R 29621234 intergenic CG1907 + chr3R 29621303 intergenic not near genes chr3R 29621372 intergenic not near genes chr3R_5_29620001 chr3R_29620001 RAL-373_125b 3331 chr3R 29627256 29627278 chr3R 29627696 29627729 8 448 16.0 9.0 12.5 0.6 473 chr3R 29627256 intergenic not near genes chr3R 29627492 intergenic not near genes chr3R 29627729 intergenic not near genes chr3R_8_29625001 chr3R_29625001 RAL-373_125b 3332 chr3R 29627528 29627577 chr3R 29627660 29627718 7 135 3.0 3.5 3.2 1.7 190 chr3R 29627528 intergenic not near genes chr3R 29627623 intergenic not near genes chr3R 29627718 intergenic not near genes chr3R_7_29625001 chr3R_29625001 RAL-373_125b 3333 chr3R 29642470 29642525 chr3R 29642597 29642652 13 123 8.5 12.0 10.2 1.2 182 chr3R 29642470 intron Dop1R2 - chr3R 29642561 intron Dop1R2 - chr3R 29642652 intron Dop1R2 - chr3R_13_29640001 chr3R_29640001 RAL-373_125b 3334 chr3R 29645779 29645848 chr3R 29645910 29645969 8 128 16.0 15.5 15.8 0.5 190 chr3R 29645779 intron Dop1R2 - chr3R 29645874 intron Dop1R2 - chr3R 29645969 intron Dop1R2 - chr3R_8_29645001 chr3R_29645001 RAL-373_125b 3335 chr3R 29648961 29649013 chr3R 29649101 29649148 9 137 1.5 8.0 4.8 1.6 187 chr3R 29648961 intron Dop1R2 - chr3R 29649054 intron Dop1R2 - chr3R 29649148 intron Dop1R2 - chr3R_9_29645001 chr3R_29645001 RAL-373_125b 3336 chr3R 29655612 29655640 chr3R 29655734 29655769 5 128 20.0 16.5 18.2 0.3 157 chr3R 29655612 intron Dop1R2 - chr3R 29655690 intron Dop1R2 - chr3R 29655769 intron Dop1R2 - chr3R_5_29655001 chr3R_29655001 RAL-373_125b 3337 chr3R 29720459 29720521 chr3R 29720604 29720674 12 146 16.0 19.5 17.8 0.6 215 chr3R 29720459 intron CG15506 + chr3R 29720566 intron CG15506 + chr3R 29720674 intron CG15506 + chr3R_12_29720001 chr3R_29720001 RAL-373_125b 3338 chr3R 29738237 29738290 chr3R 29739734 29739802 hobo 14 1512 5.0 3.0 4.0 2.8 1565 chr3R 29738237 intergenic CG1969 +,CG7598 + chr3R 29739020 intron CG1969 + chr3R 29739802 5` UTR CG1969 + chr3R_14_29735001 chr3R_29735001 RAL-373_125b 3339 chr3R 29754806 29754848 chr3R 29755230 29755272 5 418 16.5 17.0 16.8 0.3 466 chr3R 29754806 intergenic yata +,CR44953 - chr3R 29755039 intergenic CR44953 - chr3R 29755272 3` UTR CR44953 - chr3R_5_29755001 chr3R_29755001 RAL-373_125b 3340 chr3R 29754853 29754865 chr3R 29755224 29755267 5 379 16.0 16.5 16.2 0.3 414 chr3R 29754853 intergenic yata +,CR44953 - chr3R 29755060 intergenic CR44953 - chr3R 29755267 3` UTR CR44953 - chr3R_5_29755001 chr3R_29755001 RAL-373_125b 3341 chr3R 29754934 29754951 chr3R 29755051 29755079 4 124 1.5 2.5 2.0 1.3 145 chr3R 29754934 intergenic CR44953 -,yata + chr3R 29755006 intergenic CR44953 -,yata + chr3R 29755079 intergenic CR44953 - chr3R_4_29755001 chr3R_29755001 RAL-373_125b 3342 chr3R 29758902 29758946 chr3R 29759020 29759069 11 125 22.5 18.5 20.5 0.5 167 chr3R 29758902 3` UTR CR44953 - chr3R 29758986 3` UTR CR44953 - chr3R 29759069 intergenic CR44953 - chr3R_11_29755001 chr3R_29755001 RAL-373_125b 3343 chr3R 29760319 29760377 chr3R 29761570 29761628 pogo 12 1250 14.5 9.0 11.8 0.9 1309 chr3R 29760319 intergenic not near genes chr3R 29760974 intergenic not near genes chr3R 29761628 intergenic not near genes chr3R_12_29760001 chr3R_29760001 RAL-373_125b 3344 chr3R 29773865 29773895 chr3R 29773986 29774036 4 128 2.0 1.0 1.5 1.6 171 chr3R 29773865 intron kay + chr3R 29773950 intron kay + chr3R 29774036 intron kay + chr3R_4_29770001 chr3R_29770001 RAL-373_125b 3345 chr3R 29880962 29881038 chr3R 29881098 29881168 24 135 4.5 6.5 5.5 3.7 206 chr3R 29880962 intron CG31038 + chr3R 29881065 intron CG31038 + chr3R 29881168 intron CG31038 + chr3R_24_29880001 chr3R_29880001 RAL-373_125b 3346 chr3R 29881974 29882042 chr3R 29891181 29891249 roo 19 9205 4.5 8.0 6.2 2.6 9275 chr3R 29881974 intron CG31038 + chr3R 29886612 intron CG31038 + chr3R 29891249 intron CG31038 + chr3R_19_29885001 chr3R_29885001 RAL-373_125b 3347 chr3R 29950541 29950594 chr3R 29950660 29950709 14 112 10.0 16.5 13.2 1.0 168 chr3R 29950541 intergenic TkR99D - chr3R 29950625 intergenic TkR99D - chr3R 29950709 intergenic TkR99D - chr3R_14_29950001 chr3R_29950001 RAL-373_125b 3348 chr3R 29966019 29966068 chr3R 29966142 29966198 14 129 4.5 4.5 4.5 2.5 179 chr3R 29966019 intron TkR99D - chr3R 29966108 intron TkR99D - chr3R 29966198 intron TkR99D - chr3R_14_29965001 chr3R_29965001 RAL-373_125b 3349 chr3R 29966303 29966371 chr3R 29966624 29966634 10 313 16.5 14.5 15.5 0.6 331 chr3R 29966303 intron TkR99D - chr3R 29966468 intron TkR99D - chr3R 29966634 intron TkR99D - chr3R_10_29965001 chr3R_29965001 RAL-373_125b 3350 chr3R 30013643 30013693 chr3R 30013764 30013826 5 131 11.5 12.5 12.0 0.4 183 chr3R 30013643 intron CG7920 - chr3R 30013734 intron CG7920 - chr3R 30013826 intron CG7920 - chr3R_5_30010001 chr3R_30010001 RAL-373_125b 3351 chr3R 30032122 30032127 chr3R 30032241 30032253 4 126 14.0 3.5 8.8 0.4 131 chr3R 30032122 intron Axn + chr3R 30032188 intron Axn + chr3R 30032253 intron Axn + chr3R_4_30030001 chr3R_30030001 RAL-373_125b 3352 chr3R 30075525 30075538 chr3R 30075664 30075674 5 138 19.5 6.5 13.0 0.4 149 chr3R 30075525 intron sima + chr3R 30075600 intron sima + chr3R 30075674 intron sima + chr3R_5_30075001 chr3R_30075001 RAL-373_125b 3353 chr3R 30077996 30078036 chr3R 30079068 30079111 5 1077 11.0 15.0 13.0 0.4 1115 chr3R 30077996 intron sima + chr3R 30078554 intron sima + chr3R 30079111 intron sima + chr3R_5_30075001 chr3R_30075001 RAL-373_125b 3354 chr3R 30080554 30080621 chr3R 30080681 30080722 12 122 6.0 6.5 6.2 1.7 168 chr3R 30080554 intron sima + chr3R 30080638 intron sima + chr3R 30080722 intron sima + chr3R_12_30080001 chr3R_30080001 RAL-373_125b 3355 chr3R 30081831 30081858 chr3R 30081959 30081981 4 127 4.5 5.5 5.0 0.7 150 chr3R 30081831 intron sima + chr3R 30081906 intron sima + chr3R 30081981 intron sima + chr3R_4_30080001 chr3R_30080001 RAL-373_125b 3356 chr3R 30082943 30083016 chr3R 30083069 30083135 10 121 11.0 10.5 10.8 0.8 192 chr3R 30082943 intron sima + chr3R 30083039 intron sima + chr3R 30083135 intron sima + chr3R_10_30080001 chr3R_30080001 RAL-373_125b 3357 chr3R 30084810 30084875 chr3R 30086329 30086386 hobo 14 1513 3.0 6.0 4.5 2.5 1576 chr3R 30084810 intron sima + chr3R 30085598 intron sima + chr3R 30086386 intron sima + chr3R_14_30085001 chr3R_30085001 RAL-373_125b 3358 chr3R 30097435 30097651 chr3R 30097566 30097835 15 141 7.5 5.0 6.2 2.1 400 chr3R 30097435 intron sima + chr3R 30097635 intron sima + chr3R 30097835 intron sima + chr3R_15_30095001 chr3R_30095001 RAL-373_125b 3359 chr3R 30147805 30147872 chr3R 30147936 30148008 15 130 5.5 9.5 7.5 1.8 203 chr3R 30147805 intron AdoR - chr3R 30147906 intron AdoR - chr3R 30148008 intron AdoR - chr3R_15_30145001 chr3R_30145001 RAL-373_125b 3360 chr3R 30175665 30175726 chr3R 30175801 30175862 8 134 10.0 12.5 11.2 0.7 197 chr3R 30175665 intergenic CG1983 - chr3R 30175764 intergenic CG1983 - chr3R 30175862 3` UTR CG1983 - chr3R_8_30175001 chr3R_30175001 RAL-373_125b 3361 chr3R 30210522 30210667 chr3R 30210668 30210797 5 140 13.5 14.0 13.8 0.3 275 chr3R 30210522 intergenic Anp +,CecA1 + chr3R 30210660 intergenic CecA1 +,Anp + chr3R 30210797 intergenic CecA1 +,Anp + chr3R_5_30210001 chr3R_30210001 RAL-373_125b 3362 chr3R 30229794 30229850 chr3R 30229934 30229979 7 137 13.0 15.5 14.2 0.5 185 chr3R 30229794 intergenic not near genes chr3R 30229886 intergenic not near genes chr3R 30229979 intergenic not near genes chr3R_7_30225001 chr3R_30225001 RAL-373_125b 3363 chr3R 30238710 30238789 chr3R 30239936 30240013 1360 11 1226 4.0 3.0 3.5 2.4 1303 chr3R 30238710 intergenic not near genes chr3R 30239362 intergenic not near genes chr3R 30240013 intergenic not near genes chr3R_11_30235001 chr3R_30235001 RAL-373_125b 3364 chr3R 30267940 30267955 chr3R 30268064 30268091 11 132 14.5 4.5 9.5 1.0 151 chr3R 30267940 intergenic not near genes chr3R 30268016 intergenic not near genes chr3R 30268091 intergenic not near genes chr3R_11_30265001 chr3R_30265001 RAL-373_125b 3365 chr3R 30267956 30267994 chr3R 30268063 30268130 6 128 8.5 4.0 6.2 0.8 174 chr3R 30267956 intergenic not near genes chr3R 30268043 intergenic not near genes chr3R 30268130 intergenic not near genes chr3R_6_30265001 chr3R_30265001 RAL-373_125b 3366 chr3R 30268365 30268440 chr3R 30268496 30268569 7 121 12.0 13.0 12.5 0.5 204 chr3R 30268365 intergenic not near genes chr3R 30268467 intergenic not near genes chr3R 30268569 intergenic not near genes chr3R_7_30265001 chr3R_30265001 RAL-373_125b 3367 chr3R 30287765 30287775 chr3R 30287868 30287908 4 124 9.5 9.5 9.5 0.4 143 chr3R 30287765 intron hdc + chr3R 30287836 intron hdc + chr3R 30287908 intron hdc + chr3R_4_30285001 chr3R_30285001 RAL-373_125b 3368 chr3R 30315597 30315622 chr3R 30315715 30315755 14 128 8.0 15.0 11.5 1.1 158 chr3R 30315597 intron hdc + chr3R 30315676 intron hdc + chr3R 30315755 intron hdc + chr3R_14_30315001 chr3R_30315001 RAL-373_125b 3369 chr3R 30317289 30317330 chr3R 30324918 30324972 roo 5 7635 1.5 1.0 1.2 2.3 7683 chr3R 30317289 intron hdc + chr3R 30321130 intron hdc + chr3R 30324972 intron hdc + chr3R_5_30320001 chr3R_30320001 RAL-373_125b 3370 chr3R 30330455 30330517 chr3R 30330574 30330640 7 125 7.5 9.0 8.2 0.8 185 chr3R 30330455 intron hdc + chr3R 30330548 intron hdc + chr3R 30330640 intron hdc + chr3R_7_30330001 chr3R_30330001 RAL-373_125b 3371 chr3R 30335921 30335977 chr3R 30336225 30336278 6 301 8.0 8.0 8.0 0.7 357 chr3R 30335921 intron hdc + chr3R 30336100 intron hdc + chr3R 30336278 intron hdc + chr3R_6_30335001 chr3R_30335001 RAL-373_125b 3372 chr3R 30347000 30347034 chr3R 30347116 30347169 6 132 11.0 11.0 11.0 0.5 169 chr3R 30347000 intron hdc + chr3R 30347084 intron hdc + chr3R 30347169 intron hdc + chr3R_6_30345001 chr3R_30345001 RAL-373_125b 3373 chr3R 30354979 30354994 chr3R 30355134 30355154 6 156 39.5 39.0 39.2 0.1 175 chr3R 30354979 intron hdc + chr3R 30355066 intron hdc + chr3R 30355154 intron hdc + chr3R_6_30355001 chr3R_30355001 RAL-373_125b 3374 chr3R 30356425 30356489 chr3R 30356559 30356612 15 123 18.0 16.5 17.2 0.8 187 chr3R 30356425 intron hdc + chr3R 30356518 intron hdc + chr3R 30356612 intron hdc + chr3R_15_30355001 chr3R_30355001 RAL-373_125b 3375 chr3R 30366549 30366616 chr3R 30366687 30366741 10 139 17.0 18.5 17.8 0.5 192 chr3R 30366549 3` UTR hdc + chr3R 30366645 3` UTR hdc + chr3R 30366741 3` UTR hdc + chr3R_10_30365001 chr3R_30365001 RAL-373_125b 3376 chr3R 30375499 30375556 chr3R 30383174 30383231 412 9 7670 6.0 5.0 5.5 1.4 7732 chr3R 30375499 intergenic not near genes chr3R 30379365 intergenic not near genes chr3R 30383231 intergenic not near genes chr3R_9_30375001 chr3R_30375001 RAL-373_125b 3377 chr3R 30396174 30396222 chr3R 30404490 30404538 roo 9 8316 7.5 4.5 6.0 1.3 8364 chr3R 30396174 intergenic not near genes chr3R 30400356 intergenic not near genes chr3R 30404538 5` UTR CR45570 + chr3R_9_30400001 chr3R_30400001 RAL-373_125b 3378 chr3R 30419197 30419240 chr3R 30419314 30419325 5 113 14.5 13.5 14.0 0.3 128 chr3R 30419197 3` UTR,exon CG2217 -,CG42740 - chr3R 30419261 3` UTR,5` UTR CG2217 -,CG42740 - chr3R 30419325 3` UTR,5` UTR CG2217 -,CG42740 - chr3R_5_30415001 chr3R_30415001 RAL-373_125b 3379 chr3R 30456352 30456414 chr3R 30456482 30456544 9 126 12.5 17.5 15.0 0.6 192 chr3R 30456352 intergenic CG2224 -,aralar1 - chr3R 30456448 3` UTR CG2224 - chr3R 30456544 3` UTR CG2224 - chr3R_9_30455001 chr3R_30455001 RAL-373_125b 3380 chr3R 30457972 30458046 chr3R 30458102 30458170 9 129 14.0 16.0 15.0 0.6 198 chr3R 30457972 intron CG2224 - chr3R 30458071 intron CG2224 - chr3R 30458170 intron CG2224 - chr3R_9_30455001 chr3R_30455001 RAL-373_125b 3381 chr3R 30480430 30480499 chr3R 30482943 30483017 jockey 18 2513 6.0 3.5 4.8 3.1 2587 chr3R 30480430 intron PH4alphaEFB + chr3R 30481724 intron PH4alphaEFB + chr3R 30483017 intron PH4alphaEFB + chr3R_18_30480001 chr3R_30480001 RAL-373_125b 3382 chr3R 30485018 30485069 chr3R 30485133 30485195 31 131 4.0 2.5 3.2 7.4 177 chr3R 30485018 intron PH4alphaEFB + chr3R 30485106 intron PH4alphaEFB + chr3R 30485195 intron PH4alphaEFB + chr3R_31_30485001 chr3R_30485001 RAL-373_125b 3383 chr3R 30488075 30488092 chr3R 30488204 30488221 9 129 5.0 0.0 2.5 2.6 146 chr3R 30488075 intergenic Jon99Fii - chr3R 30488148 intergenic Jon99Fii - chr3R 30488221 intergenic Jon99Fii - chr3R_9_30485001 chr3R_30485001 RAL-373_125b 3384 chr3R 30552201 30552269 chr3R 30552328 30552396 13 125 12.0 11.0 11.5 1.0 195 chr3R 30552201 intron tmod + chr3R 30552298 intron tmod + chr3R 30552396 intron tmod + chr3R_13_30550001 chr3R_30550001 RAL-373_125b 3385 chr3R 30571667 30571705 chr3R 30571797 30571835 7 130 10.0 9.5 9.8 0.6 168 chr3R 30571667 intron tmod + chr3R 30571751 intron tmod + chr3R 30571835 exon tmod + chr3R_7_30570001 chr3R_30570001 RAL-373_125b 3386 chr3R 30627585 30627630 chr3R 30627690 30627699 8 108 14.5 17.5 16.0 0.5 114 chr3R 30627585 3` UTR CG2267 - chr3R 30627642 exon CG2267 - chr3R 30627699 exon CG2267 - chr3R_8_30625001 chr3R_30625001 RAL-373_125b 3387 chr3R 30634173 30634218 chr3R 30634304 30634354 7 137 22.5 20.5 21.5 0.3 181 chr3R 30634173 intergenic not near genes chr3R 30634264 intergenic not near genes chr3R 30634354 intergenic not near genes chr3R_7_30630001 chr3R_30630001 RAL-373_125b 3388 chr3R 30649817 30649855 chr3R 30649948 30649979 7 130 19.5 16.5 18.0 0.4 162 chr3R 30649817 3` UTR CG34432 + chr3R 30649898 intergenic CG34432 +,CG34433 + chr3R 30649979 exon CG34433 + chr3R_7_30645001 chr3R_30645001 RAL-373_125b 3389 chr3R 30650767 30650805 chr3R 30650914 30650947 7 145 11.0 16.5 13.8 0.5 180 chr3R 30650767 3` UTR CG34433 + chr3R 30650857 3` UTR CG34433 + chr3R 30650947 intergenic CG34433 + chr3R_7_30650001 chr3R_30650001 RAL-373_125b 3390 chr3R 30679474 30679547 chr3R 30686993 30687066 blood 15 7518 7.0 5.0 6.0 2.1 7592 chr3R 30679474 intergenic not near genes chr3R 30683270 intergenic not near genes chr3R 30687066 intergenic not near genes chr3R_15_30680001 chr3R_30680001 RAL-373_125b 3391 chr3R 30689767 30689788 chr3R 30689891 30689914 4 126 9.5 11.5 10.5 0.3 147 chr3R 30689767 intergenic not near genes chr3R 30689840 intergenic not near genes chr3R 30689914 intergenic not near genes chr3R_4_30685001 chr3R_30685001 RAL-373_125b 3392 chr3R 30690111 30690184 chr3R 30690245 30690308 11 127 13.5 14.5 14.0 0.7 197 chr3R 30690111 intergenic not near genes chr3R 30690210 intergenic Spn100A + chr3R 30690308 intergenic Spn100A + chr3R_11_30690001 chr3R_30690001 RAL-373_125b 3393 chr3R 30700842 30700868 chr3R 30700999 30701021 6 161 15.0 10.0 12.5 0.4 179 chr3R 30700842 intergenic not near genes chr3R 30700932 intergenic not near genes chr3R 30701021 intergenic not near genes chr3R_6_30700001 chr3R_30700001 RAL-373_125b 3394 chr3R 30720967 30721035 chr3R 30721278 30721341 14 309 13.5 14.0 13.8 0.9 374 chr3R 30720967 intergenic not near genes chr3R 30721154 intergenic not near genes chr3R 30721341 intergenic not near genes chr3R_14_30720001 chr3R_30720001 RAL-373_125b 3395 chr3R 30761304 30761333 chr3R 30761431 30761460 5 129 12.5 7.0 9.8 0.5 156 chr3R 30761304 intergenic not near genes chr3R 30761382 intergenic not near genes chr3R 30761460 intergenic not near genes chr3R_5_30760001 chr3R_30760001 RAL-373_125b 3396 chr3R 30818771 30818840 chr3R 30820386 30820437 1360 16 1609 2.5 7.5 5.0 2.7 1666 chr3R 30818771 intron cindr + chr3R 30819604 intron cindr + chr3R 30820437 intron cindr + chr3R_16_30815001 chr3R_30815001 RAL-373_125b 3397 chr3R 30823403 30823415 chr3R 30823549 30823561 5 146 13.5 20.0 16.8 0.3 158 chr3R 30823403 intron cindr + chr3R 30823482 intron cindr + chr3R 30823561 intron cindr + chr3R_5_30820001 chr3R_30820001 RAL-373_125b 3398 chr3R 30831672 30831682 chr3R 30831798 30831808 4 126 6.0 7.5 6.8 0.5 136 chr3R 30831672 intron CG15544 + chr3R 30831740 intron CG15544 + chr3R 30831808 intron CG15544 + chr3R_4_30830001 chr3R_30830001 RAL-373_125b 3399 chr3R 30845041 30845046 chr3R 30845169 30845169 4 127 10.0 0.0 5.0 0.7 128 chr3R 30845041 intergenic not near genes chr3R 30845105 intergenic not near genes chr3R 30845169 intergenic not near genes chr3R_4_30845001 chr3R_30845001 RAL-373_125b 3400 chr3R 30850096 30850270 chr3R 30850227 30850412 19 140 1.5 7.0 4.2 3.7 316 chr3R 30850096 intergenic not near genes chr3R 30850254 intergenic not near genes chr3R 30850412 intergenic not near genes chr3R_19_30850001 chr3R_30850001 RAL-373_125b 3401 chr3R 30888921 30888996 chr3R 30893398 30893473 21 4481 31.5 39.0 35.2 0.6 4552 chr3R 30888921 exon Sap-r - chr3R 30891197 intergenic not near genes chr3R 30893473 intergenic not near genes chr3R_21_30890001 chr3R_30890001 RAL-373_125b 3402 chr3R 30900503 30900524 chr3R 30900618 30900654 8 123 13.5 16.0 14.8 0.5 151 chr3R 30900503 exon Cyp4c3 + chr3R 30900578 3` UTR Cyp4c3 + chr3R 30900654 3` UTR Cyp4c3 + chr3R_8_30900001 chr3R_30900001 RAL-373_125b 3403 chr3R 30900535 30900552 chr3R 30900605 30900671 4 110 14.5 15.5 15.0 0.2 136 chr3R 30900535 3` UTR Cyp4c3 + chr3R 30900603 3` UTR Cyp4c3 + chr3R 30900671 3` UTR Cyp4c3 + chr3R_4_30900001 chr3R_30900001 RAL-373_125b 3404 chr3R 30946357 30946413 chr3R 30946502 30946547 8 133 0.0 0.5 0.2 6.7 190 chr3R 30946357 intergenic not near genes chr3R 30946452 intergenic not near genes chr3R 30946547 intergenic not near genes chr3R_8_30945001 chr3R_30945001 RAL-373_125b 3405 chr3R 30973085 30973164 chr3R 30973296 30973375 5 211 22.0 21.0 21.5 0.2 290 chr3R 30973085 intron 5-HT7 - chr3R 30973230 intron 5-HT7 - chr3R 30973375 intron 5-HT7 - chr3R_5_30970001 chr3R_30970001 RAL-373_125b 3406 chr3R 30996605 30996626 chr3R 30996879 30996900 7 272 11.5 11.5 11.5 0.6 295 chr3R 30996605 intron 5-HT7 - chr3R 30996752 intron 5-HT7 - chr3R 30996900 intron 5-HT7 - chr3R_7_30995001 chr3R_30995001 RAL-373_125b 3407 chr3R 30996629 30996648 chr3R 30996863 30996922 7 255 10.0 6.5 8.2 0.8 293 chr3R 30996629 intron 5-HT7 - chr3R 30996776 intron 5-HT7 - chr3R 30996922 intron 5-HT7 - chr3R_7_30995001 chr3R_30995001 RAL-373_125b 3408 chr3R 31026444 31026511 chr3R 31026569 31026627 9 123 13.0 12.5 12.8 0.7 183 chr3R 31026444 intergenic not near genes chr3R 31026536 intergenic not near genes chr3R 31026627 intergenic not near genes chr3R_9_31025001 chr3R_31025001 RAL-373_125b 3409 chr3R 31042075 31042133 chr3R 31042199 31042270 11 134 9.0 9.5 9.2 1.1 195 chr3R 31042075 exon CanA1 + chr3R 31042172 intron CanA1 + chr3R 31042270 intron CanA1 + chr3R_11_31040001 chr3R_31040001 RAL-373_125b 3410 chr3R 31074190 31074248 chr3R 31081838 31081896 springer 9 7647 8.5 4.5 6.5 1.2 7706 chr3R 31074190 intron Sox100B + chr3R 31078043 intron Sox100B + chr3R 31081896 exon Sox100B + chr3R_9_31075001 chr3R_31075001 RAL-373_125b 3411 chr3R 31098979 31099036 chr3R 31099122 31099169 11 140 16.5 16.5 16.5 0.6 190 chr3R 31098979 3` UTR CG15553 - chr3R 31099074 intron CG15553 - chr3R 31099169 exon CG15553 - chr3R_11_31095001 chr3R_31095001 RAL-373_125b 3412 chr3R 31135085 31135159 chr3R 31135243 31135316 12 157 16.0 11.0 13.5 0.8 231 chr3R 31135085 intron Gycbeta100B + chr3R 31135200 intron Gycbeta100B + chr3R 31135316 intron Gycbeta100B + chr3R_12_31135001 chr3R_31135001 RAL-373_125b 3413 chr3R 31137004 31137010 chr3R 31137180 31137186 4 176 31.5 47.0 39.2 0.1 182 chr3R 31137004 intron Gycbeta100B + chr3R 31137095 intron Gycbeta100B + chr3R 31137186 intron Gycbeta100B + chr3R_4_31135001 chr3R_31135001 RAL-373_125b 3414 chr3R 31136992 31137043 chr3R 31137203 31137252 22 183 43.5 45.5 44.5 0.5 260 chr3R 31136992 intron Gycbeta100B + chr3R 31137122 intron Gycbeta100B + chr3R 31137252 intron Gycbeta100B + chr3R_22_31135001 chr3R_31135001 RAL-373_125b 3415 chr3R 31187995 31188049 chr3R 31188137 31188174 9 144 13.5 12.5 13.0 0.6 179 chr3R 31187995 intron mesh - chr3R 31188084 intron mesh - chr3R 31188174 intron mesh - chr3R_9_31185001 chr3R_31185001 RAL-373_125b 3416 chr3R 31279350 31279398 chr3R 31285581 31285639 diver 13 6233 4.0 3.5 3.8 2.7 6289 chr3R 31279350 intergenic not near genes chr3R 31282494 intergenic not near genes chr3R 31285639 intergenic not near genes chr3R_13_31280001 chr3R_31280001 RAL-373_125b 3417 chr3R 31412661 31412735 chr3R 31412799 31412878 6 138 7.5 11.5 9.5 0.6 217 chr3R 31412661 intron Gprk2 + chr3R 31412770 intron Gprk2 + chr3R 31412878 intron Gprk2 + chr3R_6_31410001 chr3R_31410001 RAL-373_125b 3418 chr3R 31413056 31413115 chr3R 31418296 31418360 copia 12 5246 6.0 5.0 5.5 1.8 5304 chr3R 31413056 intron Gprk2 + chr3R 31415708 intron Gprk2 + chr3R 31418360 intron Gprk2 + chr3R_12_31415001 chr3R_31415001 RAL-373_125b 3419 chr3R 31426848 31426891 chr3R 31426984 31427033 12 139 9.0 11.5 10.2 1.1 185 chr3R 31426848 intron Gprk2 + chr3R 31426940 intron Gprk2 + chr3R 31427033 intron Gprk2 + chr3R_12_31425001 chr3R_31425001 RAL-373_125b 3420 chr3R 31435326 31435389 chr3R 31435528 31435571 11 199 14.5 11.5 13.0 0.8 245 chr3R 31435326 intron Gprk2 + chr3R 31435448 intron Gprk2 + chr3R 31435571 intron Gprk2 + chr3R_11_31435001 chr3R_31435001 RAL-373_125b 3421 chr3R 31440715 31440772 chr3R 31440847 31440904 13 129 11.0 15.5 13.2 0.9 189 chr3R 31440715 intron Gprk2 + chr3R 31440810 intron Gprk2 + chr3R 31440904 intron Gprk2 + chr3R_13_31440001 chr3R_31440001 RAL-373_125b 3422 chr3R 31443990 31444006 chr3R 31444133 31444154 5 142 20.0 18.5 19.2 0.2 164 chr3R 31443990 intron Gprk2 + chr3R 31444072 intron Gprk2 + chr3R 31444154 intron Gprk2 + chr3R_5_31440001 chr3R_31440001 RAL-373_125b 3423 chr3R 31445507 31445562 chr3R 31445661 31445721 11 159 13.0 17.5 15.2 0.7 214 chr3R 31445507 intron Gprk2 + chr3R 31445614 intron Gprk2 + chr3R 31445721 intron Gprk2 + chr3R_11_31445001 chr3R_31445001 RAL-373_125b 3424 chr3R 31446036 31446101 chr3R 31446176 31446244 9 139 18.5 14.5 16.5 0.5 208 chr3R 31446036 intron Gprk2 + chr3R 31446140 intron Gprk2 + chr3R 31446244 intron Gprk2 + chr3R_9_31445001 chr3R_31445001 RAL-373_125b 3425 chr3R 31450762 31450817 chr3R 31450896 31450956 9 142 20.0 17.0 18.5 0.5 194 chr3R 31450762 intron Gprk2 + chr3R 31450859 intron Gprk2 + chr3R 31450956 intron Gprk2 + chr3R_9_31450001 chr3R_31450001 RAL-373_125b 3426 chr3R 31530776 31530843 chr3R 31531153 31531182 12 362 4.0 7.0 5.5 1.8 406 chr3R 31530776 intergenic not near genes chr3R 31530979 intergenic not near genes chr3R 31531182 intergenic not near genes chr3R_12_31530001 chr3R_31530001 RAL-373_125b 3427 chr3R 31538479 31538499 chr3R 31538602 31538627 4 127 12.0 13.5 12.8 0.3 148 chr3R 31538479 intergenic not near genes chr3R 31538553 intergenic not near genes chr3R 31538627 intergenic not near genes chr3R_4_31535001 chr3R_31535001 RAL-373_125b 3428 chr3R 31539309 31539355 chr3R 31539436 31539490 9 130 12.5 22.0 17.2 0.5 181 chr3R 31539309 intergenic not near genes chr3R 31539400 intergenic not near genes chr3R 31539490 intergenic not near genes chr3R_9_31535001 chr3R_31535001 RAL-373_125b 3429 chr3R 31539812 31539874 chr3R 31539947 31540009 8 132 11.0 11.5 11.2 0.7 197 chr3R 31539812 intergenic not near genes chr3R 31539910 intergenic not near genes chr3R 31540009 intergenic not near genes chr3R_8_31535001 chr3R_31535001 RAL-373_125b 3430 chr3R 31610082 31610141 chr3R 31610218 31610275 13 134 12.5 18.0 15.2 0.8 193 chr3R 31610082 intron CycG - chr3R 31610178 intron CycG - chr3R 31610275 intron CycG - chr3R_13_31610001 chr3R_31610001 RAL-373_125b 3431 chr3R 31637811 31637883 chr3R 31637949 31638011 7 134 19.0 19.0 19.0 0.3 200 chr3R 31637811 intron kek6 + chr3R 31637911 intron kek6 + chr3R 31638011 intron kek6 + chr3R_7_31635001 chr3R_31635001 RAL-373_125b 3432 chr3R 31661767 31661815 chr3R 31662025 31662086 5 263 17.0 15.0 16.0 0.3 319 chr3R 31661767 3` UTR kek6 + chr3R 31661926 3` UTR kek6 + chr3R 31662086 3` UTR kek6 + chr3R_5_31660001 chr3R_31660001 RAL-373_125b 3433 chr3R 31670560 31670628 chr3R 31670704 31670757 16 140 15.5 16.0 15.8 1.0 197 chr3R 31670560 intron CG1815 + chr3R 31670658 intron CG1815 + chr3R 31670757 intron CG1815 + chr3R_16_31670001 chr3R_31670001 RAL-373_125b 3434 chr3R 31691491 31691559 chr3R 31696307 31696370 Doc 24 4810 6.5 8.5 7.5 2.8 4879 chr3R 31691491 intergenic not near genes chr3R 31693930 intergenic not near genes chr3R 31696370 intergenic not near genes chr3R_24_31690001 chr3R_31690001 RAL-373_125b 3435 chr3R 31831505 31831568 chr3R 31831634 31831677 9 125 13.0 17.0 15.0 0.6 172 chr3R 31831505 intron RhoGAP100F + chr3R 31831591 intron RhoGAP100F + chr3R 31831677 intron RhoGAP100F + chr3R_9_31830001 chr3R_31830001 RAL-373_125b 3436 chr3R 31858135 31858198 chr3R 31858280 31858341 11 146 0.0 5.0 2.5 3.1 206 chr3R 31858135 intron heph - chr3R 31858238 intron heph - chr3R 31858341 intron heph - chr3R_11_31855001 chr3R_31855001 RAL-373_125b 3437 chr3R 31863283 31863322 chr3R 31863407 31863451 6 124 15.0 15.0 15.0 0.4 168 chr3R 31863283 intron heph - chr3R 31863367 intron heph - chr3R 31863451 intron heph - chr3R_6_31860001 chr3R_31860001 RAL-373_125b 3438 chr3R 31864993 31865055 chr3R 31865121 31865196 4 131 10.5 11.5 11.0 0.3 203 chr3R 31864993 intron heph - chr3R 31865094 intron heph - chr3R 31865196 exon heph - chr3R_4_31865001 chr3R_31865001 RAL-373_125b 3439 chr3R 31870616 31870665 chr3R 31870751 31870801 14 138 8.5 14.0 11.2 1.1 185 chr3R 31870616 intron heph - chr3R 31870708 intron heph - chr3R 31870801 intron heph - chr3R_14_31870001 chr3R_31870001 RAL-373_125b 3440 chr3R 31917366 31917399 chr3R 31917478 31917517 5 123 23.0 18.0 20.5 0.2 151 chr3R 31917366 intron heph - chr3R 31917442 intron heph - chr3R 31917517 intron heph - chr3R_5_31915001 chr3R_31915001 RAL-373_125b 3441 chr3R 31929803 31929838 chr3R 31929985 31930014 4 180 12.5 11.0 11.8 0.3 211 chr3R 31929803 intron heph - chr3R 31929908 intron heph - chr3R 31930014 intron heph - chr3R_4_31925001 chr3R_31925001 RAL-373_125b 3442 chr3R 31930833 31930898 chr3R 31930983 31931046 6 148 8.0 6.5 7.2 0.7 213 chr3R 31930833 intron heph - chr3R 31930940 intron heph - chr3R 31931046 intron heph - chr3R_6_31930001 chr3R_31930001 RAL-373_125b 3443 chr3R 31931150 31931208 chr3R 31931278 31931341 15 130 3.5 5.5 4.5 2.7 191 chr3R 31931150 intron heph - chr3R 31931246 intron heph - chr3R 31931341 intron heph - chr3R_15_31930001 chr3R_31930001 RAL-373_125b 3444 chr3R 31949481 31949514 chr3R 31949603 31949638 6 128 18.5 14.0 16.2 0.3 157 chr3R 31949481 intron heph - chr3R 31949560 intron heph - chr3R 31949638 intron heph - chr3R_6_31945001 chr3R_31945001 RAL-373_125b 3445 chr3R 31957922 31957980 chr3R 31958053 31958112 10 134 12.0 16.5 14.2 0.7 190 chr3R 31957922 intron heph - chr3R 31958017 intron heph - chr3R 31958112 intron heph - chr3R_10_31955001 chr3R_31955001 RAL-373_125b 3446 chr3R 31991072 31991121 chr3R 31991201 31991245 6 127 13.0 18.5 15.8 0.4 173 chr3R 31991072 intron heph - chr3R 31991158 intron heph - chr3R 31991245 intron heph - chr3R_6_31990001 chr3R_31990001 RAL-373_125b 3447 chr3R 31997948 31998018 chr3R 32005468 32005538 blood 20 7514 7.0 7.5 7.2 2.4 7590 chr3R 31997948 intron heph - chr3R 32001743 intron heph - chr3R 32005538 intron heph - chr3R_20_32000001 chr3R_32000001 RAL-373_125b 3448 chr3R 32022293 32022350 chr3R 32022428 32022502 8 144 14.5 16.5 15.5 0.5 209 chr3R 32022293 5` UTR CR45557 + chr3R 32022398 5` UTR CR45557 + chr3R 32022502 5` UTR CR45557 + chr3R_8_32020001 chr3R_32020001 RAL-373_125b 3449 chr3R 32045536 32045590 chr3R 32045667 32045712 10 124 12.5 15.0 13.8 0.7 176 chr3R 32045536 3` UTR krz - chr3R 32045624 3` UTR krz - chr3R 32045712 3` UTR krz - chr3R_10_32045001 chr3R_32045001 RAL-373_125b 3450 chr4 76454 76515 chr4 81947 81997 I-element 15 5490 5.5 5.5 5.5 2.3 5543 chr4 76454 intron pan + chr4 79226 intron pan + chr4 81997 intron pan + chr4_15_75001 chr4_75001 RAL-373_125b 3451 chr4 319954 320002 chr4 328175 328228 Stalker2 6 8224 4.5 4.5 4.5 1.1 8274 chr4 319954 3` UTR CG32850 + chr4 324091 intron CG32850 + chr4 328228 3` UTR,3` UTR CG32850 +,PMCA - chr4_6_320001 chr4_320001 RAL-373_125b 3452 chr4 662136 662206 chr4 662831 662901 INE-1 24 692 6.5 6.5 6.5 3.2 765 chr4 662136 intron gw - chr4 662518 intron gw - chr4 662901 5` UTR gw - chr4_24_660001 chr4_660001 RAL-373_125b 3453 chr4 671566 671619 chr4 680199 680252 Tirant 18 8630 6.5 5.0 5.8 2.6 8686 chr4 671566 intron CG11360 + chr4 675909 intron CG11360 + chr4 680252 intron CG11360 + chr4_18_675001 chr4_675001 RAL-373_125b 3454 chr4 706636 706658 chr4 706819 706846 5 185 28.5 33.0 30.8 0.2 210 chr4 706636 intron ey + chr4 706741 intron ey + chr4 706846 intron ey + chr4_5_705001 chr4_705001 RAL-373_125b 3455 chr4 852859 852926 chr4 853273 853330 25 411 5.0 10.0 7.5 2.9 471 chr4 852859 intergenic not near genes chr4 853094 intergenic not near genes chr4 853330 intergenic CG11148 - chr4_25_850001 chr4_850001 RAL-373_125b 3456 chr4 853290 853359 chr4 853594 853661 18 302 45.5 47.0 46.2 0.4 371 chr4 853290 intergenic CG11148 - chr4 853476 intergenic CG11148 - chr4 853661 intergenic CG11148 - chr4_18_850001 chr4_850001 RAL-373_125b 3457 chrX 194600 194649 chrX 194738 194787 8 134 10.0 3.5 6.8 1.0 187 chrX 194600 intron tyn + chrX 194694 intron tyn + chrX 194787 intron tyn + chrX_8_190001 chrX_190001 RAL-373_125b 3458 chrX 254330 254395 chrX 254517 254577 14 185 3.5 4.0 3.8 2.9 247 chrX 254330 3` UTR G9a + chrX 254454 3` UTR G9a + chrX 254577 3` UTR G9a + chrX_14_250001 chrX_250001 RAL-373_125b 3459 chrX 295818 295822 chrX 303488 303492 412 5 7670 9.0 5.5 7.2 0.6 7674 chrX 295818 intron CG3777 + chrX 299655 intron CG3777 + chrX 303492 intron CG3777 + chrX_5_295001 chrX_295001 RAL-373_125b 3460 chrX 295823 295882 chrX 303486 303552 412 13 7669 3.5 5.0 4.2 2.5 7729 chrX 295823 intron CG3777 + chrX 299688 intron CG3777 + chrX 303552 intron CG3777 + chrX_13_295001 chrX_295001 RAL-373_125b 3461 chrX 318434 318493 chrX 323570 323624 flea 14 5133 11.5 6.5 9.0 1.4 5190 chrX 318434 intron,intron CG3777 +,CG32816 - chrX 321029 intron,intron CG3777 +,CG32816 - chrX 323624 intron,intron CG3777 +,CG32816 - chrX_14_320001 chrX_320001 RAL-373_125b 3462 chrX 331569 331617 chrX 331971 332019 9 401 8.5 4.5 6.5 1.2 450 chrX 331569 intron,intron CG3777 +,CG32816 - chrX 331794 intron,intron CG3777 +,CG32816 - chrX 332019 intron,intron CG3777 +,CG32816 - chrX_9_330001 chrX_330001 RAL-373_125b 3463 chrX 428391 428433 chrX 434610 434668 3S18 10 6232 3.5 1.5 2.5 2.9 6277 chrX 428391 intron CG32816 - chrX 431530 intron CG32816 - chrX 434668 intron CG32816 - chrX_10_430001 chrX_430001 RAL-373_125b 3464 chrX 550719 550771 chrX 551344 551401 15 627 5.0 6.5 5.8 2.2 682 chrX 550719 intron Appl + chrX 551060 intron Appl + chrX 551401 intron Appl + chrX_15_550001 chrX_550001 RAL-373_125b 3465 chrX 551404 551442 chrX 559006 559044 412 11 7603 6.5 3.5 5.0 1.8 7640 chrX 551404 intron Appl + chrX 555224 intron Appl + chrX 559044 intron Appl + chrX_11_555001 chrX_555001 RAL-373_125b 3466 chrX 639280 639340 chrX 639402 639473 10 126 5.5 8.5 7.0 1.2 193 chrX 639280 intron su(s) + chrX 639376 intron su(s) + chrX 639473 intron su(s) + chrX_10_635001 chrX_635001 RAL-373_125b 3467 chrX 677371 677441 chrX 677527 677591 10 149 1.0 3.5 2.2 3.1 220 chrX 677371 intergenic not near genes chrX 677481 intergenic not near genes chrX 677591 intergenic not near genes chrX_10_675001 chrX_675001 RAL-373_125b 3468 chrX 802253 802305 chrX 802370 802405 11 107 8.0 6.0 7.0 1.4 152 chrX 802253 exon CG13359 - chrX 802329 exon CG13359 - chrX 802405 exon CG13359 - chrX_11_800001 chrX_800001 RAL-373_125b 3469 chrX 827564 827624 chrX 835400 835465 roo 19 7840 3.5 7.5 5.5 2.9 7901 chrX 827564 intron CG43867 - chrX 831514 intron CG43867 - chrX 835465 intron CG43867 - chrX_19_830001 chrX_830001 RAL-373_125b 3470 chrX 906660 906724 chrX 908497 908563 S-element 10 1836 6.5 9.5 8.0 1.1 1903 chrX 906660 intron CG43867 - chrX 907612 intron CG43867 - chrX 908563 intron CG43867 - chrX_10_905001 chrX_905001 RAL-373_125b 3471 chrX 911162 911233 chrX 911448 911514 18 281 3.5 4.0 3.8 3.8 352 chrX 911162 intron CG43867 - chrX 911338 intron CG43867 - chrX 911514 intron CG43867 - chrX_18_910001 chrX_910001 RAL-373_125b 3472 chrX 1063725 1063750 chrX 1072568 1072588 roo 6 8842 5.5 8.5 7.0 0.8 8863 chrX 1063725 intron CR44779 + chrX 1068156 intron CR44779 + chrX 1072588 intron CR44779 + chrX_6_1065001 chrX_1065001 RAL-373_125b 3473 chrX 1357743 1357796 chrX 1367953 1368013 Doc 15 10217 6.0 5.0 5.5 2.3 10270 chrX 1357743 intergenic png - chrX 1362878 intergenic not near genes chrX 1368013 intergenic not near genes chrX_15_1360001 chrX_1360001 RAL-373_125b 3474 chrX 1416354 1416423 chrX 1416473 1416547 10 119 4.5 2.5 3.5 2.2 193 chrX 1416354 intron futsch + chrX 1416450 intron futsch + chrX 1416547 intron futsch + chrX_10_1415001 chrX_1415001 RAL-373_125b 3475 chrX 1518010 1518054 chrX 1523445 1523483 jockey 12 5446 5.5 9.0 7.2 1.5 5473 chrX 1518010 intergenic inc + chrX 1520746 intergenic not near genes chrX 1523483 intergenic not near genes chrX_12_1520001 chrX_1520001 RAL-373_125b 3476 chrX 1598240 1598283 chrX 1598397 1598456 19 169 2.0 4.0 3.0 4.8 216 chrX 1598240 intron,intron Mur2B -,br + chrX 1598348 intron,intron Mur2B -,br + chrX 1598456 intron,intron Mur2B -,br + chrX_19_1595001 chrX_1595001 RAL-373_125b 3477 chrX 1706806 1706842 chrX 1706932 1706967 7 122 8.5 9.0 8.8 0.7 161 chrX 1706806 intergenic not near genes chrX 1706886 intergenic not near genes chrX 1706967 intergenic not near genes chrX_7_1705001 chrX_1705001 RAL-373_125b 3478 chrX 1930493 1930566 chrX 1938114 1938179 opus 8 7620 4.0 7.5 5.8 1.2 7686 chrX 1930493 3` UTR CG11596 + chrX 1934336 intergenic not near genes chrX 1938179 3` UTR CG3857 - chrX_8_1930001 chrX_1930001 RAL-373_125b 3479 chrX 1954841 1954863 chrX 1962831 1962846 Stalker2 6 7982 10.5 5.0 7.8 0.7 8005 chrX 1954841 intron Hr4 + chrX 1958844 intron Hr4 + chrX 1962846 intron Hr4 + chrX_6_1955001 chrX_1955001 RAL-373_125b 3480 chrX 1954872 1954902 chrX 1962826 1962877 Stalker2 7 7966 5.5 5.0 5.2 1.1 8005 chrX 1954872 intron Hr4 + chrX 1958874 intron Hr4 + chrX 1962877 intron Hr4 + chrX_7_1955001 chrX_1955001 RAL-373_125b 3481 chrX 2107147 2107175 chrX 2107289 2107311 10 140 13.5 4.5 9.0 1.0 164 chrX 2107147 intron csw + chrX 2107229 intron csw + chrX 2107311 intron csw + chrX_10_2105001 chrX_2105001 RAL-373_125b 3482 chrX 2107179 2107206 chrX 2107279 2107343 7 129 6.0 4.0 5.0 1.2 164 chrX 2107179 intron csw + chrX 2107261 intron csw + chrX 2107343 intron csw + chrX_7_2105001 chrX_2105001 RAL-373_125b 3483 chrX 2308798 2308815 chrX 2317431 2317448 Tirant 4 8633 10.5 9.5 10.0 0.4 8650 chrX 2308798 intron phl + chrX 2313123 intron phl + chrX 2317448 intron phl + chrX_4_2310001 chrX_2310001 RAL-373_125b 3484 chrX 2385697 2385765 chrX 2385814 2385892 11 123 3.0 0.5 1.8 3.9 195 chrX 2385697 exon PsGEF - chrX 2385794 intron PsGEF - chrX 2385892 intron PsGEF - chrX_11_2385001 chrX_2385001 RAL-373_125b 3485 chrX 2399795 2399861 chrX 2408198 2408215 roo 10 8386 7.0 1.5 4.2 1.9 8420 chrX 2399795 intergenic not near genes chrX 2404005 intergenic not near genes chrX 2408215 intergenic not near genes chrX_10_2400001 chrX_2400001 RAL-373_125b 3486 chrX 2429428 2429487 chrX 2429558 2429624 12 135 4.0 7.5 5.8 1.8 196 chrX 2429428 intergenic gt - chrX 2429526 intergenic not near genes chrX 2429624 intergenic not near genes chrX_12_2425001 chrX_2425001 RAL-373_125b 3487 chrX 2578767 2578827 chrX 2578909 2578963 20 139 2.0 4.5 3.2 4.8 196 chrX 2578767 intergenic Pdfr +,Vha36-3 - chrX 2578865 intergenic Pdfr +,Vha36-3 - chrX 2578963 intergenic Vha36-3 -,Pdfr + chrX_20_2575001 chrX_2575001 RAL-373_125b 3488 chrX 2823766 2823780 chrX 2832348 2832362 roo 5 8592 7.0 8.0 7.5 0.6 8596 chrX 2823766 intron kirre + chrX 2828064 intron kirre + chrX 2832362 intron kirre + chrX_5_2825001 chrX_2825001 RAL-373_125b 3489 chrX 2844875 2844924 chrX 2852335 2852379 mdg1 8 7458 5.0 8.0 6.5 1.1 7504 chrX 2844875 intron kirre + chrX 2848627 intron kirre + chrX 2852379 intron kirre + chrX_8_2845001 chrX_2845001 RAL-373_125b 3490 chrX 3052700 3052718 chrX 3052853 3052880 4 162 6.5 6.0 6.2 0.6 180 chrX 3052700 intron kirre + chrX 3052790 intron kirre + chrX 3052880 intron kirre + chrX_4_3050001 chrX_3050001 RAL-373_125b 3491 chrX 3052721 3052738 chrX 3052843 3052905 4 156 4.0 4.0 4.0 0.8 184 chrX 3052721 intron kirre + chrX 3052813 intron kirre + chrX 3052905 intron kirre + chrX_4_3050001 chrX_3050001 RAL-373_125b 3492 chrX 3057988 3058035 chrX 3058279 3058325 pogo 6 290 5.0 3.0 4.0 1.2 337 chrX 3057988 intron kirre + chrX 3058156 intron kirre + chrX 3058325 intron kirre + chrX_6_3055001 chrX_3055001 RAL-373_125b 3493 chrX 3109395 3109464 chrX 3109522 3109591 10 126 2.0 5.5 3.8 2.1 196 chrX 3109395 intron kirre + chrX 3109493 intron kirre + chrX 3109591 intron kirre + chrX_10_3105001 chrX_3105001 RAL-373_125b 3494 chrX 3243595 3243645 chrX 3243735 3243785 11 137 5.0 5.0 5.0 1.8 190 chrX 3243595 intron dnc + chrX 3243690 intron dnc + chrX 3243785 intron dnc + chrX_11_3240001 chrX_3240001 RAL-373_125b 3495 chrX 3306310 3306375 chrX 3306442 3306506 7 131 3.5 0.0 1.8 2.5 196 chrX 3306310 intron dnc + chrX 3306408 intron dnc + chrX 3306506 intron dnc + chrX_7_3305001 chrX_3305001 RAL-373_125b 3496 chrX 3351803 3351811 chrX 3351899 3351947 6 118 5.0 10.5 7.8 0.7 144 chrX 3351803 intergenic not near genes chrX 3351875 intergenic not near genes chrX 3351947 intergenic not near genes chrX_6_3350001 chrX_3350001 RAL-373_125b 3497 chrX 3414990 3415043 chrX 3421214 3421278 3S18 6 6227 5.0 4.0 4.5 1.1 6288 chrX 3414990 intron,intron CR44999 +,CG12535 - chrX 3418134 intron,intron CR44999 +,CG12535 - chrX 3421278 intron,intron CR44999 +,CG12535 - chrX_6_3415001 chrX_3415001 RAL-373_125b 3498 chrX 3476305 3476369 chrX 3476438 3476504 13 130 1.5 3.5 2.5 3.7 199 chrX 3476305 intron CR44999 + chrX 3476404 intron CR44999 + chrX 3476504 intron,3` UTR CR44999 +,CG10804 - chrX_13_3475001 chrX_3475001 RAL-373_125b 3499 chrX 3493056 3493088 chrX 3502253 3502285 roo 7 9203 8.0 4.0 6.0 1.0 9229 chrX 3493056 intron,intron CR44999 +,Gas8 - chrX 3497670 intron,intron CR44999 +,Gas8 - chrX 3502285 intron,intron CR44999 +,Gas8 - chrX_7_3495001 chrX_3495001 RAL-373_125b 3500 chrX 3513725 3513785 chrX 3513858 3513918 13 131 2.5 3.5 3.0 3.2 193 chrX 3513725 intron,intron CR44999 +,CG32791 - chrX 3513822 intron,intron CR44999 +,CG32791 - chrX 3513918 intron,intron CR44999 +,CG32791 - chrX_13_3510001 chrX_3510001 RAL-373_125b 3501 chrX 3533512 3533518 chrX 3533619 3533646 5 122 14.0 8.0 11.0 0.4 134 chrX 3533512 intron CG32791 - chrX 3533579 intron CG32791 - chrX 3533646 intron CG32791 - chrX_5_3530001 chrX_3530001 RAL-373_125b 3502 chrX 3535386 3535407 chrX 3535517 3535548 7 134 9.0 4.5 6.8 0.9 162 chrX 3535386 intron CG32791 - chrX 3535467 intron CG32791 - chrX 3535548 intron CG32791 - chrX_7_3535001 chrX_3535001 RAL-373_125b 3503 chrX 3582683 3582708 chrX 3582816 3582835 4 129 4.0 4.5 4.2 0.8 152 chrX 3582683 intron AstA-R1 + chrX 3582759 intron AstA-R1 + chrX 3582835 intron AstA-R1 + chrX_4_3580001 chrX_3580001 RAL-373_125b 3504 chrX 3597513 3597573 chrX 3619731 3619791 roo 16 22215 7.0 4.0 5.5 2.5 22278 chrX 3597513 intron AstA-R1 + chrX 3608652 intron AstA-R1 + chrX 3619791 intron AstA-R1 + chrX_16_3605001 chrX_3605001 RAL-373_125b 3505 chrX 3650280 3650354 chrX 3650410 3650479 15 126 6.5 5.0 5.8 2.2 199 chrX 3650280 intron AstA-R1 + chrX 3650380 intron AstA-R1 + chrX 3650479 intron AstA-R1 + chrX_15_3650001 chrX_3650001 RAL-373_125b 3506 chrX 3657368 3657443 chrX 3657498 3657573 19 124 6.0 2.5 4.2 3.7 205 chrX 3657368 intron AstA-R1 + chrX 3657470 intron AstA-R1 + chrX 3657573 intron AstA-R1 + chrX_19_3655001 chrX_3655001 RAL-373_125b 3507 chrX 3713063 3713103 chrX 3713216 3713262 8 157 9.5 8.5 9.0 0.8 199 chrX 3713063 intron Rala - chrX 3713162 intron Rala - chrX 3713262 intron Rala - chrX_8_3710001 chrX_3710001 RAL-373_125b 3508 chrX 3713105 3713131 chrX 3713262 3713290 7 158 6.0 12.5 9.2 0.7 185 chrX 3713105 intron Rala - chrX 3713198 intron Rala - chrX 3713290 intron Rala - chrX_7_3710001 chrX_3710001 RAL-373_125b 3509 chrX 3726752 3726789 chrX 3730194 3730196 NOF 10 3439 3.0 11.5 7.2 1.2 3444 chrX 3726752 intron tlk + chrX 3728474 intron tlk + chrX 3730196 intron tlk + chrX_10_3725001 chrX_3725001 RAL-373_125b 3510 chrX 3840219 3840230 chrX 3840350 3840360 4 130 12.0 8.0 10.0 0.4 141 chrX 3840219 intron ec + chrX 3840290 intron ec + chrX 3840360 intron ec + chrX_4_3840001 chrX_3840001 RAL-373_125b 3511 chrX 3842279 3842348 chrX 3842568 3842639 pogo 15 287 8.0 7.0 7.5 1.8 360 chrX 3842279 intron ec + chrX 3842459 intron ec + chrX 3842639 intron ec + chrX_15_3840001 chrX_3840001 RAL-373_125b 3512 chrX 3881234 3881298 chrX 3881416 3881487 13 185 3.5 2.0 2.8 3.4 253 chrX 3881234 intron VhaAC39-1 + chrX 3881360 intron VhaAC39-1 + chrX 3881487 exon VhaAC39-1 + chrX_13_3880001 chrX_3880001 RAL-373_125b 3513 chrX 3986851 3986891 chrX 3994508 3994569 412 16 7675 3.5 6.5 5.0 2.7 7718 chrX 3986851 intergenic not near genes chrX 3990710 intergenic not near genes chrX 3994569 intergenic not near genes chrX_16_3990001 chrX_3990001 RAL-373_125b 3514 chrX 4039030 4039052 chrX 4039159 4039165 4 120 17.0 12.0 14.5 0.3 135 chrX 4039030 intergenic not near genes chrX 4039098 intergenic not near genes chrX 4039165 intergenic not near genes chrX_4_4035001 chrX_4035001 RAL-373_125b 3515 chrX 4044071 4044099 chrX 4044173 4044226 7 123 5.0 5.5 5.2 1.1 155 chrX 4044071 intergenic not near genes chrX 4044148 intergenic not near genes chrX 4044226 intergenic not near genes chrX_7_4040001 chrX_4040001 RAL-373_125b 3516 chrX 4101852 4101863 chrX 4101976 4101992 4 128 2.5 9.0 5.8 0.6 140 chrX 4101852 exon CG15375 + chrX 4101922 exon CG15375 + chrX 4101992 exon CG15375 + chrX_4_4100001 chrX_4100001 RAL-373_125b 3517 chrX 4101864 4101890 chrX 4101966 4102000 5 114 2.0 7.0 4.5 0.9 136 chrX 4101864 exon CG15375 + chrX 4101932 exon CG15375 + chrX 4102000 exon CG15375 + chrX_5_4100001 chrX_4100001 RAL-373_125b 3518 chrX 4157854 4157915 chrX 4164955 4165015 297 11 7098 3.5 5.5 4.5 2.0 7161 chrX 4157854 intron Fas2 - chrX 4161434 intron Fas2 - chrX 4165015 intron Fas2 - chrX_11_4160001 chrX_4160001 RAL-373_125b 3519 chrX 4209893 4209929 chrX 4210031 4210069 5 138 0.0 8.5 4.2 1.0 176 chrX 4209893 intergenic not near genes chrX 4209981 intergenic not near genes chrX 4210069 intergenic not near genes chrX_5_4205001 chrX_4205001 RAL-373_125b 3520 chrX 4216298 4216334 chrX 4216427 4216462 11 129 5.5 9.5 7.5 1.3 164 chrX 4216298 intergenic not near genes chrX 4216380 intergenic CG15571 - chrX 4216462 intergenic CG15571 - chrX_11_4215001 chrX_4215001 RAL-373_125b 3521 chrX 4235698 4235728 chrX 4235872 4235900 6 172 4.5 6.5 5.5 0.9 202 chrX 4235698 intergenic not near genes chrX 4235799 intergenic not near genes chrX 4235900 intergenic not near genes chrX_6_4235001 chrX_4235001 RAL-373_125b 3522 chrX 4252914 4252978 chrX 4253039 4253099 12 132 7.5 4.0 5.8 1.8 185 chrX 4252914 intergenic CG15576 - chrX 4253006 intergenic CG15576 - chrX 4253099 intergenic CG15576 - chrX_12_4250001 chrX_4250001 RAL-373_125b 3523 chrX 4263795 4263824 chrX 4264191 4264200 5 392 3.0 12.0 7.5 0.6 405 chrX 4263795 intergenic not near genes chrX 4263998 intergenic not near genes chrX 4264200 intergenic not near genes chrX_5_4260001 chrX_4260001 RAL-373_125b 3524 chrX 4282165 4282213 chrX 4282527 4282605 16 371 31.0 33.5 32.2 0.5 440 chrX 4282165 intergenic not near genes chrX 4282385 intergenic not near genes chrX 4282605 intergenic not near genes chrX_16_4280001 chrX_4280001 RAL-373_125b 3525 chrX 4343832 4343884 chrX 4343997 4344048 7 157 4.5 3.0 3.8 1.5 216 chrX 4343832 intron norpA + chrX 4343940 intron norpA + chrX 4344048 intron norpA + chrX_7_4340001 chrX_4340001 RAL-373_125b 3526 chrX 4382329 4382377 chrX 4382459 4382507 10 129 3.5 0.0 1.8 3.6 178 chrX 4382329 3` UTR CG12688 + chrX 4382418 3` UTR CG12688 + chrX 4382507 intergenic CG12688 + chrX_10_4380001 chrX_4380001 RAL-373_125b 3527 chrX 4388255 4388275 chrX 4388437 4388458 4 183 4.5 6.5 5.5 0.6 203 chrX 4388255 intron CR32773 - chrX 4388356 intron CR32773 - chrX 4388458 intron CR32773 - chrX_4_4385001 chrX_4385001 RAL-373_125b 3528 chrX 4396929 4397004 chrX 4397064 4397129 20 130 2.0 2.0 2.0 6.7 200 chrX 4396929 intron CR32773 - chrX 4397029 intron CR32773 - chrX 4397129 intron CR32773 - chrX_20_4395001 chrX_4395001 RAL-373_125b 3529 chrX 4409089 4409160 chrX 4409224 4409295 12 131 8.0 6.0 7.0 1.5 206 chrX 4409089 intron CR32773 - chrX 4409192 intron CR32773 - chrX 4409295 intron CR32773 - chrX_12_4405001 chrX_4405001 RAL-373_125b 3530 chrX 4574854 4574931 chrX 4574994 4575072 11 135 1.0 3.5 2.2 3.4 218 chrX 4574854 intron CR32773 - chrX 4574963 intron CR32773 - chrX 4575072 intron CR32773 - chrX_11_4570001 chrX_4570001 RAL-373_125b 3531 chrX 4575574 4575619 chrX 4575713 4575758 13 138 0.5 6.5 3.5 2.9 184 chrX 4575574 intron CR32773 - chrX 4575666 intron CR32773 - chrX 4575758 intron CR32773 - chrX_13_4575001 chrX_4575001 RAL-373_125b 3532 chrX 4590618 4590674 chrX 4590755 4590801 7 131 7.0 9.0 8.0 0.8 183 chrX 4590618 intron CR32773 - chrX 4590710 intron CR32773 - chrX 4590801 intron CR32773 - chrX_7_4590001 chrX_4590001 RAL-373_125b 3533 chrX 4660787 4660848 chrX 4660936 4660990 6 144 4.5 0.0 2.2 1.9 203 chrX 4660787 intron CG3009 - chrX 4660888 intron CG3009 - chrX 4660990 intron CG3009 - chrX_6_4660001 chrX_4660001 RAL-373_125b 3534 chrX 4693767 4693775 chrX 4693891 4693915 5 138 0.0 7.5 3.8 1.0 148 chrX 4693767 intron ctp + chrX 4693841 intron ctp + chrX 4693915 intron ctp + chrX_5_4690001 chrX_4690001 RAL-373_125b 3535 chrX 4700357 4700420 chrX 4700744 4700808 jockey 10 391 3.0 5.5 4.2 1.9 451 chrX 4700357 3` UTR ctp + chrX 4700582 3` UTR ctp + chrX 4700808 3` UTR ctp + chrX_10_4700001 chrX_4700001 RAL-373_125b 3536 chrX 4716541 4716560 chrX 4716668 4716679 5 131 8.5 2.5 5.5 0.8 138 chrX 4716541 intron Proc-R + chrX 4716610 intron Proc-R + chrX 4716679 intron Proc-R + chrX_5_4715001 chrX_4715001 RAL-373_125b 3537 chrX 4716569 4716593 chrX 4716661 4716714 9 114 6.5 2.5 4.5 1.6 145 chrX 4716569 intron Proc-R + chrX 4716642 intron Proc-R + chrX 4716714 intron Proc-R + chrX_9_4715001 chrX_4715001 RAL-373_125b 3538 chrX 4744751 4744822 chrX 4744886 4744952 12 133 4.0 4.0 4.0 2.4 201 chrX 4744751 intergenic not near genes chrX 4744852 intergenic not near genes chrX 4744952 intergenic not near genes chrX_12_4740001 chrX_4740001 RAL-373_125b 3539 chrX 4755391 4755434 chrX 4755511 4755556 6 125 0.0 0.0 0.0 6.0 165 chrX 4755391 intergenic not near genes chrX 4755474 intergenic not near genes chrX 4755556 intergenic not near genes chrX_6_4755001 chrX_4755001 RAL-373_125b 3540 chrX 4763208 4763276 chrX 4763746 4763808 Stalker4 15 535 5.5 3.0 4.2 2.9 600 chrX 4763208 intergenic not near genes chrX 4763508 intergenic not near genes chrX 4763808 intergenic not near genes chrX_15_4760001 chrX_4760001 RAL-373_125b 3541 chrX 4792331 4792400 chrX 4792814 4792877 jockey 10 477 2.5 5.0 3.8 2.1 546 chrX 4792331 intergenic not near genes chrX 4792604 intergenic not near genes chrX 4792877 intergenic not near genes chrX_10_4790001 chrX_4790001 RAL-373_125b 3542 chrX 4827985 4827998 chrX 4835341 4835402 Stalker4 10 7396 6.0 5.0 5.5 1.5 7417 chrX 4827985 intergenic not near genes chrX 4831694 intergenic not near genes chrX 4835402 intergenic not near genes chrX_10_4830001 chrX_4830001 RAL-373_125b 3543 chrX 4856102 4856145 chrX 4856227 4856262 14 124 5.5 6.0 5.8 2.1 160 chrX 4856102 intron CG42594 + chrX 4856182 intron CG42594 + chrX 4856262 intron CG42594 + chrX_14_4855001 chrX_4855001 RAL-373_125b 3544 chrX 4878841 4878905 chrX 4879000 4879064 12 158 2.0 0.5 1.2 5.5 223 chrX 4878841 intron CG42594 + chrX 4878952 intron CG42594 + chrX 4879064 intron CG42594 + chrX_12_4875001 chrX_4875001 RAL-373_125b 3545 chrX 4975534 4975604 chrX 4975762 4975831 9 227 1.5 5.5 3.5 2.0 297 chrX 4975534 intron CR44833 - chrX 4975682 intron CR44833 - chrX 4975831 intron CR44833 - chrX_9_4975001 chrX_4975001 RAL-373_125b 3546 chrX 4990024 4990076 chrX 4997283 4997340 roo 11 7262 2.0 5.5 3.8 2.3 7316 chrX 4990024 intron CR44833 - chrX 4993682 intron CR44833 - chrX 4997340 intron CR44833 - chrX_11_4990001 chrX_4990001 RAL-373_125b 3547 chrX 5096243 5096267 chrX 5103853 5103873 springer 9 7610 4.5 6.5 5.5 1.4 7630 chrX 5096243 intron,intron CG15465 +,rg + chrX 5100058 intron,intron CG15465 +,rg + chrX 5103873 intron,intron CG15465 +,rg + chrX_9_5100001 chrX_5100001 RAL-373_125b 3548 chrX 5096268 5096304 chrX 5103852 5103894 springer 8 7599 3.0 6.5 4.8 1.4 7626 chrX 5096268 intron,intron CG15465 +,rg + chrX 5100081 intron,intron CG15465 +,rg + chrX 5103894 intron,intron CG15465 +,rg + chrX_8_5100001 chrX_5100001 RAL-373_125b 3549 chrX 5122773 5122843 chrX 5123051 5123121 9 276 5.5 0.0 2.8 2.4 348 chrX 5122773 intron,intron CG15465 +,rg + chrX 5122947 intron,intron CG15465 +,rg + chrX 5123121 intron,intron CG15465 +,rg + chrX_9_5120001 chrX_5120001 RAL-373_125b 3550 chrX 5159681 5159749 chrX 5159825 5159893 15 144 7.5 3.0 5.2 2.4 212 chrX 5159681 intron,intron CG15465 +,rg + chrX 5159787 intron,intron CG15465 +,rg + chrX 5159893 intron,intron CG15465 +,rg + chrX_15_5155001 chrX_5155001 RAL-373_125b 3551 chrX 5272784 5272843 chrX 5272911 5272981 12 128 3.5 3.0 3.2 2.9 197 chrX 5272784 intergenic not near genes chrX 5272882 intergenic not near genes chrX 5272981 intergenic not near genes chrX_12_5270001 chrX_5270001 RAL-373_125b 3552 chrX 5329401 5329459 chrX 5329548 5329594 6 141 2.5 0.0 1.2 2.7 193 chrX 5329401 intergenic CG3309 -,XRCC1 + chrX 5329498 intergenic CG3309 -,XRCC1 + chrX 5329594 intergenic CG3309 -,XRCC1 + chrX_6_5325001 chrX_5325001 RAL-373_125b 3553 chrX 5338669 5338734 chrX 5339962 5340025 jockey 8 1296 5.0 1.5 3.2 1.9 1356 chrX 5338669 intergenic not near genes chrX 5339347 intergenic not near genes chrX 5340025 intergenic SK + chrX_8_5335001 chrX_5335001 RAL-373_125b 3554 chrX 5344992 5345052 chrX 5345223 5345288 13 225 0.5 3.5 2.0 4.3 296 chrX 5344992 intron SK + chrX 5345140 intron SK + chrX 5345288 intron SK + chrX_13_5345001 chrX_5345001 RAL-373_125b 3555 chrX 5350301 5350314 chrX 5350412 5350443 7 119 6.5 9.0 7.8 0.8 142 chrX 5350301 intron SK + chrX 5350372 intron SK + chrX 5350443 intron SK + chrX_7_5350001 chrX_5350001 RAL-373_125b 3556 chrX 5459548 5459578 chrX 5459684 5459714 6 136 5.5 7.5 6.5 0.8 166 chrX 5459548 intron SPR + chrX 5459631 intron SPR + chrX 5459714 intron SPR + chrX_6_5455001 chrX_5455001 RAL-373_125b 3557 chrX 5524804 5524828 chrX 5528708 5528737 412 5 3905 10.0 1.0 5.5 0.8 3933 chrX 5524804 intergenic snoRNA:Psi28S-3342 - chrX 5526770 intergenic not near genes chrX 5528737 intergenic Vsx2 - chrX_5_5525001 chrX_5525001 RAL-373_125b 3558 chrX 5727388 5727412 chrX 5732177 5732201 Doc 7 4788 4.5 4.5 4.5 1.3 4813 chrX 5727388 intron CG32758 - chrX 5729794 intron CG32758 - chrX 5732201 intron CG32758 - chrX_7_5725001 chrX_5725001 RAL-373_125b 3559 chrX 5883773 5883841 chrX 5884053 5884096 pogo 18 286 3.5 8.5 6.0 2.6 323 chrX 5883773 intron CR45668 - chrX 5883934 intron CR45668 - chrX 5884096 intron CR45668 - chrX_18_5880001 chrX_5880001 RAL-373_125b 3560 chrX 5884125 5884187 chrX 5884416 5884469 pogo 11 290 5.5 5.5 5.5 1.7 344 chrX 5884125 intron CR45668 - chrX 5884297 intron CR45668 - chrX 5884469 intron CR45668 - chrX_11_5880001 chrX_5880001 RAL-373_125b 3561 chrX 5953765 5953771 chrX 5953900 5953946 5 158 9.0 11.5 10.2 0.4 181 chrX 5953765 exon CG6048 + chrX 5953856 exon CG6048 + chrX 5953946 exon CG6048 + chrX_5_5950001 chrX_5950001 RAL-373_125b 3562 chrX 6009193 6009263 chrX 6009583 6009653 19 388 6.5 1.5 4.0 3.8 460 chrX 6009193 intron mab-21 - chrX 6009423 intron mab-21 - chrX 6009653 intron mab-21 - chrX_19_6005001 chrX_6005001 RAL-373_125b 3563 chrX 6080788 6080827 chrX 6080916 6080961 10 128 3.0 3.0 3.0 2.5 173 chrX 6080788 intron CG4660 - chrX 6080874 intron CG4660 - chrX 6080961 intron CG4660 - chrX_10_6080001 chrX_6080001 RAL-373_125b 3564 chrX 6171549 6171614 chrX 6179032 6179069 Quasimodo 13 7476 4.5 7.0 5.8 1.9 7520 chrX 6171549 intron Ca-alpha1T - chrX 6175309 intron Ca-alpha1T - chrX 6179069 intron Ca-alpha1T - chrX_13_6175001 chrX_6175001 RAL-373_125b 3565 chrX 6219393 6219465 chrX 6219525 6219597 12 129 3.0 4.0 3.5 2.7 204 chrX 6219393 intergenic Btd - chrX 6219495 intergenic Btd -,Efr + chrX 6219597 intergenic Btd -,Efr + chrX_12_6215001 chrX_6215001 RAL-373_125b 3566 chrX 6312298 6312375 chrX 6312438 6312509 13 138 2.0 3.5 2.8 3.4 211 chrX 6312298 intron CG15894 + chrX 6312404 intron CG15894 + chrX 6312509 intron CG15894 + chrX_13_6310001 chrX_6310001 RAL-373_125b 3567 chrX 6388644 6388692 chrX 6388765 6388818 8 124 4.0 9.5 6.8 1.0 174 chrX 6388644 intergenic not near genes chrX 6388731 intergenic not near genes chrX 6388818 intergenic not near genes chrX_8_6385001 chrX_6385001 RAL-373_125b 3568 chrX 6392832 6392891 chrX 6397647 6397706 Doc 23 4810 4.5 4.5 4.5 4.2 4874 chrX 6392832 intergenic not near genes chrX 6395269 intergenic not near genes chrX 6397706 intergenic not near genes chrX_23_6395001 chrX_6395001 RAL-373_125b 3569 chrX 6445270 6445333 chrX 6451078 6451141 297 10 5807 7.0 4.0 5.5 1.5 5871 chrX 6445270 intron CG42340 - chrX 6448206 intron CG42340 - chrX 6451141 intron CG42340 - chrX_10_6445001 chrX_6445001 RAL-373_125b 3570 chrX 6536274 6536329 chrX 6536611 6536642 7 322 8.0 7.5 7.8 0.8 368 chrX 6536274 exon dx + chrX 6536458 exon dx + chrX 6536642 exon dx + chrX_7_6535001 chrX_6535001 RAL-373_125b 3571 chrX 6562788 6562844 chrX 6571306 6571370 Tirant 15 8522 10.0 4.0 7.0 1.9 8582 chrX 6562788 intron CG34417 + chrX 6567079 intron CG34417 + chrX 6571370 intron CG34417 + chrX_15_6565001 chrX_6565001 RAL-373_125b 3572 chrX 6591804 6591847 chrX 6591939 6591982 5 134 5.5 0.0 2.8 1.3 178 chrX 6591804 intron Pat1 + chrX 6591893 intron Pat1 + chrX 6591982 intron Pat1 + chrX_5_6590001 chrX_6590001 RAL-373_125b 3573 chrX 6618430 6618472 chrX 6618548 6618564 10 123 6.5 8.0 7.2 1.2 134 chrX 6618430 intron pigs + chrX 6618497 intron pigs + chrX 6618564 intron pigs + chrX_10_6615001 chrX_6615001 RAL-373_125b 3574 chrX 6733417 6733662 chrX 6733530 6733786 15 124 6.5 6.0 6.2 2.1 369 chrX 6733417 intron,intron CG3168 -,CR43461 + chrX 6733602 intron,intron CG3168 -,CR43461 + chrX 6733786 intron,intron CG3168 -,CR43461 + chrX_15_6730001 chrX_6730001 RAL-373_125b 3575 chrX 6737478 6737547 chrX 6737610 6737648 10 127 5.5 4.0 4.8 1.7 170 chrX 6737478 intron CG3168 - chrX 6737563 intron CG3168 - chrX 6737648 intron CG3168 - chrX_10_6735001 chrX_6735001 RAL-373_125b 3576 chrX 6792040 6792078 chrX 6792176 6792214 5 136 7.0 5.0 6.0 0.7 174 chrX 6792040 intron C3G - chrX 6792127 intron C3G - chrX 6792214 intron C3G - chrX_5_6790001 chrX_6790001 RAL-373_125b 3577 chrX 6794969 6795013 chrX 6795105 6795149 14 128 6.5 2.0 4.2 2.7 180 chrX 6794969 intron C3G - chrX 6795059 intron C3G - chrX 6795149 intron C3G - chrX_14_6795001 chrX_6795001 RAL-373_125b 3578 chrX 6865750 6865790 chrX 6865881 6865917 11 130 7.5 6.0 6.8 1.4 167 chrX 6865750 intron CG14434 - chrX 6865834 intron CG14434 - chrX 6865917 intron CG14434 - chrX_11_6865001 chrX_6865001 RAL-373_125b 3579 chrX 6871149 6871206 chrX 6871284 6871321 13 128 2.5 5.5 4.0 2.6 172 chrX 6871149 intron CG43736 + chrX 6871235 intron CG43736 + chrX 6871321 intron CG43736 + chrX_13_6870001 chrX_6870001 RAL-373_125b 3580 chrX 6897654 6897709 chrX 6897813 6897863 12 155 0.0 5.0 2.5 3.4 209 chrX 6897654 intergenic not near genes chrX 6897758 intergenic not near genes chrX 6897863 intergenic not near genes chrX_12_6895001 chrX_6895001 RAL-373_125b 3581 chrX 6901344 6901377 chrX 6901469 6901498 9 121 6.0 5.5 5.8 1.3 154 chrX 6901344 intergenic not near genes chrX 6901421 intergenic not near genes chrX 6901498 intergenic not near genes chrX_9_6900001 chrX_6900001 RAL-373_125b 3582 chrX 6984581 6984645 chrX 6984702 6984761 10 125 3.0 4.0 3.5 2.2 180 chrX 6984581 intron ogre - chrX 6984671 intron ogre - chrX 6984761 intron ogre - chrX_10_6980001 chrX_6980001 RAL-373_125b 3583 chrX 6988499 6988512 chrX 6988634 6988645 6 134 9.0 8.5 8.8 0.6 146 chrX 6988499 intron ogre - chrX 6988572 intron ogre - chrX 6988645 intron ogre - chrX_6_6985001 chrX_6985001 RAL-373_125b 3584 chrX 6989472 6989524 chrX 6989598 6989661 12 135 5.5 3.5 4.5 2.2 189 chrX 6989472 intron ogre - chrX 6989566 intron ogre - chrX 6989661 intron ogre - chrX_12_6985001 chrX_6985001 RAL-373_125b 3585 chrX 7023565 7023625 chrX 7031005 7031059 Tabor 16 7437 4.5 5.5 5.0 2.7 7494 chrX 7023565 intron CG12541 - chrX 7027312 intron CG12541 - chrX 7031059 intron CG12541 - chrX_16_7025001 chrX_7025001 RAL-373_125b 3586 chrX 7125220 7125266 chrX 7134414 7134474 roo 9 9204 0.0 7.0 3.5 2.0 9254 chrX 7125220 intergenic not near genes chrX 7129847 intergenic not near genes chrX 7134474 intergenic not near genes chrX_9_7125001 chrX_7125001 RAL-373_125b 3587 chrX 7217901 7217969 chrX 7218033 7218033 17 130 0.0 4.5 2.2 5.3 132 chrX 7217901 intron,intron CG9650 +,CR44357 - chrX 7217967 intron,intron CG9650 +,CR44357 - chrX 7218033 intron,intron CG9650 +,CR44357 - chrX_17_7215001 chrX_7215001 RAL-373_125b 3588 chrX 7338270 7338338 chrX 7338418 7338486 9 147 4.0 4.0 4.0 1.8 216 chrX 7338270 intron,intron,intron CR44357 -,CG1677 -,CBP + chrX 7338378 intron,intron,intron CR44357 -,CG1677 -,CBP + chrX 7338486 intron,intron,intron CR44357 -,CG1677 -,CBP + chrX_9_7335001 chrX_7335001 RAL-373_125b 3589 chrX 7570598 7570665 chrX 7570776 7570848 17 178 1.0 4.5 2.8 4.5 250 chrX 7570598 intergenic not near genes chrX 7570723 intergenic not near genes chrX 7570848 intergenic not near genes chrX_17_7570001 chrX_7570001 RAL-373_125b 3590 chrX 7573125 7573174 chrX 7573247 7573301 12 125 5.5 10.5 8.0 1.3 176 chrX 7573125 intergenic not near genes chrX 7573213 intergenic not near genes chrX 7573301 intergenic not near genes chrX_12_7570001 chrX_7570001 RAL-373_125b 3591 chrX 7640557 7640625 chrX 7640692 7640755 12 130 8.0 5.0 6.5 1.6 198 chrX 7640557 intron ct + chrX 7640656 intron ct + chrX 7640755 intron ct + chrX_12_7640001 chrX_7640001 RAL-373_125b 3592 chrX 7702874 7702922 chrX 7703363 7703411 jockey 18 488 10.0 5.5 7.8 2.0 537 chrX 7702874 intron CHES-1-like - chrX 7703142 intron CHES-1-like - chrX 7703411 intron CHES-1-like - chrX_18_7700001 chrX_7700001 RAL-373_125b 3593 chrX 7720527 7720576 chrX 7720642 7720703 8 126 2.0 0.0 1.0 4.0 176 chrX 7720527 intergenic not near genes chrX 7720615 intergenic not near genes chrX 7720703 intergenic not near genes chrX_8_7720001 chrX_7720001 RAL-373_125b 3594 chrX 7832394 7832407 chrX 7832533 7832546 4 139 9.0 5.5 7.2 0.5 152 chrX 7832394 intron CG1402 + chrX 7832470 intron CG1402 + chrX 7832546 intron CG1402 + chrX_4_7830001 chrX_7830001 RAL-373_125b 3595 chrX 7832408 7832460 chrX 7832531 7832599 13 136 2.0 5.5 3.8 2.7 191 chrX 7832408 intron CG1402 + chrX 7832504 intron CG1402 + chrX 7832599 intron CG1402 + chrX_13_7830001 chrX_7830001 RAL-373_125b 3596 chrX 7845694 7845727 chrX 7847222 7847268 hopper2 8 1538 6.0 4.0 5.0 1.3 1574 chrX 7845694 intergenic not near genes chrX 7846481 intergenic not near genes chrX 7847268 intergenic not near genes chrX_8_7845001 chrX_7845001 RAL-373_125b 3597 chrX 7858743 7858769 chrX 7858869 7858895 6 126 6.5 0.0 3.2 1.4 152 chrX 7858743 3` UTR CG1409 + chrX 7858819 intergenic CG1409 + chrX 7858895 intergenic CG1409 + chrX_6_7855001 chrX_7855001 RAL-373_125b 3598 chrX 8031404 8031405 chrX 8035762 8035764 Juan 4 4358 1.0 7.0 4.0 0.8 4360 chrX 8031404 intergenic not near genes chrX 8033584 intergenic not near genes chrX 8035764 3` UTR CG2233 - chrX_4_8030001 chrX_8030001 RAL-373_125b 3599 chrX 8031412 8031448 chrX 8035760 8035794 Juan 16 4355 1.0 6.5 3.8 3.3 4382 chrX 8031412 intergenic not near genes chrX 8033603 intergenic not near genes chrX 8035794 3` UTR CG2233 - chrX_16_8030001 chrX_8030001 RAL-373_125b 3600 chrX 8085530 8085601 chrX 8085666 8085737 14 135 5.5 6.0 5.8 2.1 207 chrX 8085530 intron,5` UTR CG2256 -,CR45535 + chrX 8085634 intron,5` UTR CG2256 -,CR45535 + chrX 8085737 intron,5` UTR CG2256 -,CR45535 + chrX_14_8085001 chrX_8085001 RAL-373_125b 3601 chrX 8092247 8092308 chrX 8092382 8092443 18 133 3.0 6.0 4.5 3.3 196 chrX 8092247 intron Ubc-E2H - chrX 8092345 intron Ubc-E2H - chrX 8092443 intron Ubc-E2H - chrX_18_8090001 chrX_8090001 RAL-373_125b 3602 chrX 8232116 8232165 chrX 8232238 8232280 13 121 7.0 6.0 6.5 1.7 164 chrX 8232116 intron sdt + chrX 8232198 intron sdt + chrX 8232280 intron sdt + chrX_13_8230001 chrX_8230001 RAL-373_125b 3603 chrX 8305149 8305216 chrX 8305279 8305336 12 124 6.0 3.5 4.8 2.1 187 chrX 8305149 intron nAChRalpha3 - chrX 8305242 intron nAChRalpha3 - chrX 8305336 intron nAChRalpha3 - chrX_12_8305001 chrX_8305001 RAL-373_125b 3604 chrX 8327254 8327268 chrX 8327383 8327397 4 129 6.5 8.0 7.2 0.5 143 chrX 8327254 intron nAChRalpha3 - chrX 8327326 intron nAChRalpha3 - chrX 8327397 intron nAChRalpha3 - chrX_4_8325001 chrX_8325001 RAL-373_125b 3605 chrX 8371108 8371180 chrX 8371314 8371347 8 189 3.0 0.0 1.5 3.2 239 chrX 8371108 intergenic not near genes chrX 8371228 intergenic not near genes chrX 8371347 intergenic not near genes chrX_8_8370001 chrX_8370001 RAL-373_125b 3606 chrX 8501543 8501619 chrX 8501943 8502014 19 393 6.0 6.0 6.0 2.7 471 chrX 8501543 intron CG33181 + chrX 8501778 intron CG33181 + chrX 8502014 intron CG33181 + chrX_19_8500001 chrX_8500001 RAL-373_125b 3607 chrX 8509068 8509118 chrX 8509195 8509245 11 127 0.5 3.0 1.8 3.9 177 chrX 8509068 intron CG33181 + chrX 8509156 intron CG33181 + chrX 8509245 intron CG33181 + chrX_11_8505001 chrX_8505001 RAL-373_125b 3608 chrX 8544113 8544158 chrX 8544232 8544282 7 125 3.0 5.5 4.2 1.3 169 chrX 8544113 intron Nrg + chrX 8544198 intron Nrg + chrX 8544282 intron Nrg + chrX_7_8540001 chrX_8540001 RAL-373_125b 3609 chrX 8743246 8743264 chrX 8743349 8743386 9 123 0.5 7.0 3.8 1.9 140 chrX 8743246 intergenic not near genes chrX 8743316 intergenic not near genes chrX 8743386 intergenic not near genes chrX_9_8740001 chrX_8740001 RAL-373_125b 3610 chrX 8772199 8772250 chrX 8772328 8772373 17 121 7.0 9.0 8.0 1.9 174 chrX 8772199 intron Lim1 - chrX 8772286 intron Lim1 - chrX 8772373 intron Lim1 - chrX_17_8770001 chrX_8770001 RAL-373_125b 3611 chrX 8811015 8811060 chrX 8811159 8811207 6 145 7.5 8.5 8.0 0.7 192 chrX 8811015 intergenic not near genes chrX 8811111 intergenic not near genes chrX 8811207 intergenic not near genes chrX_6_8810001 chrX_8810001 RAL-373_125b 3612 chrX 8894952 8894990 chrX 8895087 8895114 5 130 4.5 4.0 4.2 1.0 162 chrX 8894952 intron Moe - chrX 8895033 intron Moe - chrX 8895114 intron Moe - chrX_5_8895001 chrX_8895001 RAL-373_125b 3613 chrX 8908772 8908786 chrX 8908920 8908928 5 147 10.5 2.5 6.5 0.7 156 chrX 8908772 intron rdgA + chrX 8908850 intron rdgA + chrX 8908928 intron rdgA + chrX_5_8905001 chrX_8905001 RAL-373_125b 3614 chrX 8915227 8915268 chrX 8915358 8915394 11 128 3.0 8.0 5.5 1.7 167 chrX 8915227 intron rdgA + chrX 8915310 intron rdgA + chrX 8915394 intron rdgA + chrX_11_8915001 chrX_8915001 RAL-373_125b 3615 chrX 8922314 8922347 chrX 8922773 8922831 jockey 11 473 11.0 6.5 8.8 1.1 517 chrX 8922314 intron rdgA + chrX 8922572 intron rdgA + chrX 8922831 intron rdgA + chrX_11_8920001 chrX_8920001 RAL-373_125b 3616 chrX 8944862 8944926 chrX 8945138 8945203 15 275 4.5 2.5 3.5 3.3 341 chrX 8944862 intron rdgA + chrX 8945032 intron rdgA + chrX 8945203 intron rdgA + chrX_15_8945001 chrX_8945001 RAL-373_125b 3617 chrX 8971845 8971878 chrX 8971969 8972007 7 127 3.5 0.0 1.8 2.5 162 chrX 8971845 intron rdgA + chrX 8971926 intron rdgA + chrX 8972007 intron rdgA + chrX_7_8970001 chrX_8970001 RAL-373_125b 3618 chrX 9041956 9042017 chrX 9042114 9042166 5 155 0.0 4.5 2.2 1.6 210 chrX 9041956 intron,intron CR43836 -,CG42388 + chrX 9042061 intron,intron CR43836 -,CG42388 + chrX 9042166 intron,intron CR43836 -,CG42388 + chrX_5_9040001 chrX_9040001 RAL-373_125b 3619 chrX 9058922 9058958 chrX 9059028 9059085 9 111 6.0 9.0 7.5 1.1 163 chrX 9058922 intron CG15365 - chrX 9059004 intron CG15365 - chrX 9059085 intron CG15365 - chrX_9_9055001 chrX_9055001 RAL-373_125b 3620 chrX 9218029 9218077 chrX 9218170 9218204 7 137 6.0 7.5 6.8 0.9 175 chrX 9218029 3` UTR t - chrX 9218116 3` UTR t - chrX 9218204 3` UTR t - chrX_7_9215001 chrX_9215001 RAL-373_125b 3621 chrX 9410217 9410247 chrX 9410317 9410375 13 124 3.0 3.5 3.2 3.1 158 chrX 9410217 intron mgl - chrX 9410296 intron mgl - chrX 9410375 intron mgl - chrX_13_9410001 chrX_9410001 RAL-373_125b 3622 chrX 9503211 9503211 chrX 22383373 22383376 8 12880164 15.5 147.5 81.5 0.1 12880165 chrX 9503211 3` UTR CG32700 - chrX 15943294 intron CG8924 + chrX 22383376 intergenic not near genes chrX_8_15940001 chrX_15940001 RAL-373_125b 3623 chrX 9508099 9508149 chrX 9509667 9509714 jockey 8 1565 4.5 6.5 5.5 1.2 1615 chrX 9508099 intron CG32700 - chrX 9508906 intron CG32700 - chrX 9509714 intron CG32700 - chrX_8_9505001 chrX_9505001 RAL-373_125b 3624 chrX 9543348 9543419 chrX 9543477 9543542 21 127 5.0 3.5 4.2 4.0 194 chrX 9543348 intron CG32700 - chrX 9543445 intron CG32700 - chrX 9543542 intron CG32700 - chrX_21_9540001 chrX_9540001 RAL-373_125b 3625 chrX 9575771 9575822 chrX 9576120 9576165 mdg3 11 362 8.5 5.0 6.8 1.4 394 chrX 9575771 intron,exon CG32699 -,CG42395 - chrX 9575968 intron,intron CG32699 -,CG42395 - chrX 9576165 intron,5` UTR CG32699 -,CG42395 - chrX_11_9575001 chrX_9575001 RAL-373_125b 3626 chrX 9732331 9732341 chrX 9732457 9732467 6 126 7.0 3.0 5.0 1.0 136 chrX 9732331 intron Sp1 + chrX 9732399 intron Sp1 + chrX 9732467 intron Sp1 + chrX_6_9730001 chrX_9730001 RAL-373_125b 3627 chrX 9758015 9758046 chrX 9758150 9758181 5 135 5.0 0.0 2.5 1.4 166 chrX 9758015 intergenic not near genes chrX 9758098 intergenic not near genes chrX 9758181 intergenic not near genes chrX_5_9755001 chrX_9755001 RAL-373_125b 3628 chrX 9791818 9791895 chrX 9791965 9792031 15 142 1.0 5.5 3.2 3.6 213 chrX 9791818 intron CG32698 + chrX 9791924 intron CG32698 + chrX 9792031 intron CG32698 + chrX_15_9790001 chrX_9790001 RAL-373_125b 3629 chrX 10111098 10111133 chrX 10111293 10111353 12 214 5.0 3.5 4.2 2.3 255 chrX 10111098 intron RhoU + chrX 10111226 intron RhoU + chrX 10111353 intron RhoU + chrX_12_10110001 chrX_10110001 RAL-373_125b 3630 chrX 10133600 10133610 chrX 10133726 10133743 4 127 12.5 9.0 10.8 0.3 143 chrX 10133600 intron,intron RhoU +,CR44894 - chrX 10133672 intron,intron RhoU +,CR44894 - chrX 10133743 intron,intron RhoU +,CR44894 - chrX_4_10130001 chrX_10130001 RAL-373_125b 3631 chrX 10138177 10138242 chrX 10145731 10145790 412 17 7552 4.5 4.0 4.2 3.3 7613 chrX 10138177 intron,intron RhoU +,CR44894 - chrX 10141984 intron,intron RhoU +,CR44894 - chrX 10145790 intron,intron RhoU +,CR44894 - chrX_17_10140001 chrX_10140001 RAL-373_125b 3632 chrX 10151877 10151905 chrX 10152004 10152032 8 126 4.5 4.5 4.5 1.5 155 chrX 10151877 intron CR44894 - chrX 10151954 intron CR44894 - chrX 10152032 intron CR44894 - chrX_8_10150001 chrX_10150001 RAL-373_125b 3633 chrX 10154251 10154313 chrX 10154377 10154414 14 122 4.5 6.0 5.2 2.3 163 chrX 10154251 intron,intron CR44894 -,CG12645 + chrX 10154332 intron,intron CR44894 -,CG12645 + chrX 10154414 intron,exon CR44894 -,CG12645 + chrX_14_10150001 chrX_10150001 RAL-373_125b 3634 chrX 10177238 10177294 chrX 10177366 10177407 12 122 0.5 6.5 3.5 2.7 169 chrX 10177238 intron,intron CR44894 -,CG43902 + chrX 10177322 intron,intron CR44894 -,CG43902 + chrX 10177407 intron,intron CR44894 -,CG43902 + chrX_12_10175001 chrX_10175001 RAL-373_125b 3635 chrX 10216818 10216822 chrX 10216936 10216943 5 125 14.5 11.0 12.8 0.4 125 chrX 10216818 3` UTR l(1)G0230 + chrX 10216880 3` UTR l(1)G0230 + chrX 10216943 3` UTR l(1)G0230 + chrX_5_10215001 chrX_10215001 RAL-373_125b 3636 chrX 10216823 10216826 chrX 10216928 10216932 4 116 14.5 9.0 11.8 0.3 109 chrX 10216823 3` UTR l(1)G0230 + chrX 10216878 3` UTR l(1)G0230 + chrX 10216932 3` UTR l(1)G0230 + chrX_4_10215001 chrX_10215001 RAL-373_125b 3637 chrX 10306015 10306060 chrX 10306146 10306181 5 123 7.0 0.0 3.5 1.1 166 chrX 10306015 intron alpha-Man-I - chrX 10306098 intron alpha-Man-I - chrX 10306181 intron alpha-Man-I - chrX_5_10305001 chrX_10305001 RAL-373_125b 3638 chrX 10317526 10317581 chrX 10317637 10317709 13 126 4.5 5.5 5.0 2.2 183 chrX 10317526 intron alpha-Man-I - chrX 10317618 intron alpha-Man-I - chrX 10317709 intron alpha-Man-I - chrX_13_10315001 chrX_10315001 RAL-373_125b 3639 chrX 10343430 10343502 chrX 10343662 10343744 14 238 3.5 5.5 4.5 2.5 314 chrX 10343430 intron CG43740 + chrX 10343587 intron CG43740 + chrX 10343744 intron CG43740 + chrX_14_10340001 chrX_10340001 RAL-373_125b 3640 chrX 10369061 10369124 chrX 10369278 10369341 14 212 6.0 5.0 5.5 2.2 280 chrX 10369061 intron CG17841 + chrX 10369201 intron CG17841 + chrX 10369341 intron CG17841 + chrX_14_10365001 chrX_10365001 RAL-373_125b 3641 chrX 10532464 10532520 chrX 10532588 10532643 21 125 6.5 8.0 7.2 2.6 179 chrX 10532464 intron spri - chrX 10532554 intron spri - chrX 10532643 intron spri - chrX_21_10530001 chrX_10530001 RAL-373_125b 3642 chrX 10550821 10550881 chrX 10552331 10552396 hobo 10 1513 2.5 5.5 4.0 2.0 1575 chrX 10550821 intron spri - chrX 10551608 intron spri - chrX 10552396 intron spri - chrX_10_10550001 chrX_10550001 RAL-373_125b 3643 chrX 10686006 10686081 chrX 10691193 10691268 roo 19 5185 2.5 0.0 1.2 8.6 5262 chrX 10686006 intron X11Lbeta + chrX 10688637 intron X11Lbeta + chrX 10691268 intron X11Lbeta + chrX_19_10685001 chrX_10685001 RAL-373_125b 3644 chrX 10772671 10772698 chrX 10772758 10772829 Tirant 10 118 3.5 4.0 3.8 2.1 158 chrX 10772671 intron CG15211 + chrX 10772750 intron CG15211 + chrX 10772829 intron CG15211 + chrX_10_10770001 chrX_10770001 RAL-373_125b 3645 chrX 10802987 10803003 chrX 10803122 10803138 8 129 9.0 8.0 8.5 0.8 151 chrX 10802987 intron Imp - chrX 10803062 intron Imp - chrX 10803138 intron Imp - chrX_8_10800001 chrX_10800001 RAL-373_125b 3646 chrX 10803008 10803041 chrX 10803118 10803161 14 126 5.5 9.0 7.2 1.7 153 chrX 10803008 intron Imp - chrX 10803084 intron Imp - chrX 10803161 intron Imp - chrX_14_10800001 chrX_10800001 RAL-373_125b 3647 chrX 10876565 10876606 chrX 10876693 10876734 8 122 8.5 2.0 5.2 1.3 169 chrX 10876565 intron CG1637 - chrX 10876650 intron CG1637 - chrX 10876734 intron CG1637 - chrX_8_10875001 chrX_10875001 RAL-373_125b 3648 chrX 11062410 11062469 chrX 11062543 11062610 12 143 3.5 5.5 4.5 2.2 200 chrX 11062410 exon CG1537 - chrX 11062510 intron CG1537 - chrX 11062610 intron CG1537 - chrX_12_11060001 chrX_11060001 RAL-373_125b 3649 chrX 11069107 11069144 chrX 11069300 11069332 6 191 6.0 2.0 4.0 1.2 225 chrX 11069107 intergenic not near genes chrX 11069220 intergenic not near genes chrX 11069332 intergenic not near genes chrX_6_11065001 chrX_11065001 RAL-373_125b 3650 chrX 11095959 11096003 chrX 11103111 11103155 HMS-Beagle 7 7151 6.5 8.5 7.5 0.8 7196 chrX 11095959 intergenic not near genes chrX 11099557 intergenic not near genes chrX 11103155 intron CG42249 + chrX_7_11095001 chrX_11095001 RAL-373_125b 3651 chrX 11166714 11166753 chrX 11166845 11166884 8 129 6.5 3.0 4.8 1.4 170 chrX 11166714 intergenic not near genes chrX 11166799 intergenic not near genes chrX 11166884 intergenic not near genes chrX_8_11165001 chrX_11165001 RAL-373_125b 3652 chrX 11184198 11184247 chrX 11189327 11189354 flea 5 5124 6.0 5.5 5.8 0.7 5156 chrX 11184198 intergenic not near genes chrX 11186776 intergenic not near genes chrX 11189354 intergenic not near genes chrX_5_11185001 chrX_11185001 RAL-373_125b 3653 chrX 11205261 11205308 chrX 11205387 11205434 6 125 1.5 2.5 2.0 2.0 173 chrX 11205261 intergenic not near genes chrX 11205348 intergenic not near genes chrX 11205434 intergenic not near genes chrX_6_11205001 chrX_11205001 RAL-373_125b 3654 chrX 11268543 11268592 chrX 11270081 11270135 hopper2 15 1536 0.5 7.5 4.0 3.0 1592 chrX 11268543 intron CG44422 - chrX 11269339 intron CG44422 - chrX 11270135 intron CG44422 - chrX_15_11265001 chrX_11265001 RAL-373_125b 3655 chrX 11292959 11292968 chrX 11293085 11293094 5 126 8.5 0.0 4.2 1.0 135 chrX 11292959 intron CG44422 - chrX 11293026 intron CG44422 - chrX 11293094 intron CG44422 - chrX_5_11290001 chrX_11290001 RAL-373_125b 3656 chrX 11312030 11312087 chrX 11319418 11319474 Stalker2 8 7392 1.5 2.5 2.0 2.7 7444 chrX 11312030 intergenic not near genes chrX 11315752 intergenic not near genes chrX 11319474 intergenic not near genes chrX_8_11315001 chrX_11315001 RAL-373_125b 3657 chrX 11319900 11319923 chrX 11320059 11320082 9 158 9.0 2.0 5.5 1.4 182 chrX 11319900 intergenic not near genes chrX 11319991 intergenic not near genes chrX 11320082 intergenic not near genes chrX_9_11315001 chrX_11315001 RAL-373_125b 3658 chrX 11499072 11499102 chrX 11499200 11499224 5 124 4.0 3.5 3.8 1.0 152 chrX 11499072 intron Drak + chrX 11499148 intron Drak + chrX 11499224 intron Drak + chrX_5_11495001 chrX_11495001 RAL-373_125b 3659 chrX 11499103 11499129 chrX 11499199 11499257 5 118 3.5 3.5 3.5 1.1 154 chrX 11499103 intron Drak + chrX 11499180 intron Drak + chrX 11499257 intron Drak + chrX_5_11495001 chrX_11495001 RAL-373_125b 3660 chrX 11535000 11535046 chrX 11541520 11541566 Burdock 12 6517 6.5 5.5 6.0 1.7 6566 chrX 11535000 intron Drak + chrX 11538283 intron Drak + chrX 11541566 intron Drak + chrX_12_11535001 chrX_11535001 RAL-373_125b 3661 chrX 11633375 11633434 chrX 11640479 11640538 297 15 7101 8.0 6.0 7.0 1.9 7163 chrX 11633375 intron Ptp10D + chrX 11636956 intron Ptp10D + chrX 11640538 intron Ptp10D + chrX_15_11635001 chrX_11635001 RAL-373_125b 3662 chrX 11645081 11645116 chrX 11648300 11648335 NOF 10 3215 8.5 3.0 5.8 1.5 3254 chrX 11645081 intron Ptp10D + chrX 11646708 intron Ptp10D + chrX 11648335 intron Ptp10D + chrX_10_11645001 chrX_11645001 RAL-373_125b 3663 chrX 11804631 11804683 chrX 11804780 11804837 7 152 3.5 2.0 2.8 1.8 206 chrX 11804631 intron Hsc70-3 - chrX 11804734 intron Hsc70-3 - chrX 11804837 intron Hsc70-3 - chrX_7_11800001 chrX_11800001 RAL-373_125b 3664 chrX 11880883 11880919 chrX 11881013 11881031 5 128 10.0 5.0 7.5 0.6 148 chrX 11880883 exon CG10353 - chrX 11880957 intron CG10353 - chrX 11881031 intron CG10353 - chrX_5_11880001 chrX_11880001 RAL-373_125b 3665 chrX 11922329 11922375 chrX 11922507 11922557 9 180 5.5 6.5 6.0 1.3 228 chrX 11922329 exon Sclp - chrX 11922443 intron Sclp - chrX 11922557 intron Sclp - chrX_9_11920001 chrX_11920001 RAL-373_125b 3666 chrX 11936555 11936573 chrX 11936693 11936722 8 142 0.0 6.5 3.2 1.9 167 chrX 11936555 intron cac - chrX 11936638 intron cac - chrX 11936722 exon cac - chrX_8_11935001 chrX_11935001 RAL-373_125b 3667 chrX 12056893 12056957 chrX 12057060 12057124 14 165 1.5 2.5 2.0 4.7 231 chrX 12056893 intron,intron CR43960 +,Ten-a + chrX 12057008 intron,intron CR43960 +,Ten-a + chrX 12057124 intron,intron CR43960 +,Ten-a + chrX_14_12055001 chrX_12055001 RAL-373_125b 3668 chrX 12088852 12088882 chrX 12088970 12089001 4 118 2.5 3.5 3.0 1.0 149 chrX 12088852 intron,intron CR43960 +,Ten-a + chrX 12088926 intron,intron CR43960 +,Ten-a + chrX 12089001 intron,intron CR43960 +,Ten-a + chrX_4_12085001 chrX_12085001 RAL-373_125b 3669 chrX 12129328 12129378 chrX 12129564 12129614 7 236 7.5 3.0 5.2 1.1 286 chrX 12129328 intron Ten-a + chrX 12129471 intron Ten-a + chrX 12129614 intron Ten-a + chrX_7_12125001 chrX_12125001 RAL-373_125b 3670 chrX 12168114 12168123 chrX 12173592 12173610 I-element 4 5487 9.5 1.5 5.5 0.6 5496 chrX 12168114 intron Ten-a + chrX 12170862 intron Ten-a + chrX 12173610 intron Ten-a + chrX_4_12170001 chrX_12170001 RAL-373_125b 3671 chrX 12202731 12202797 chrX 12202865 12202926 11 131 1.5 3.0 2.2 3.4 195 chrX 12202731 intron Ten-a + chrX 12202828 intron Ten-a + chrX 12202926 intron Ten-a + chrX_11_12200001 chrX_12200001 RAL-373_125b 3672 chrX 12246941 12246959 chrX 12247079 12247096 4 136 4.0 3.0 3.5 0.9 155 chrX 12246941 intron Ten-a + chrX 12247018 intron Ten-a + chrX 12247096 intron Ten-a + chrX_4_12245001 chrX_12245001 RAL-373_125b 3673 chrX 12248701 12248772 chrX 12248841 12248908 10 139 6.5 4.0 5.2 1.6 207 chrX 12248701 intron Ten-a + chrX 12248804 intron Ten-a + chrX 12248908 intron Ten-a + chrX_10_12245001 chrX_12245001 RAL-373_125b 3674 chrX 12272794 12272865 chrX 12272923 12272994 11 126 4.5 3.0 3.8 2.3 200 chrX 12272794 intron Ten-a + chrX 12272894 intron Ten-a + chrX 12272994 intron Ten-a + chrX_11_12270001 chrX_12270001 RAL-373_125b 3675 chrX 12349212 12349257 chrX 12349338 12349377 8 116 2.5 5.0 3.8 1.7 165 chrX 12349212 intergenic not near genes chrX 12349294 intergenic not near genes chrX 12349377 intergenic not near genes chrX_8_12345001 chrX_12345001 RAL-373_125b 3676 chrX 12350741 12350774 chrX 12350857 12350892 7 120 6.5 0.0 3.2 1.7 151 chrX 12350741 intergenic not near genes chrX 12350816 intergenic not near genes chrX 12350892 intergenic not near genes chrX_7_12350001 chrX_12350001 RAL-373_125b 3677 chrX 12381808 12381852 chrX 12385771 12385815 flea 7 3961 4.0 4.0 4.0 1.4 4007 chrX 12381808 intergenic not near genes chrX 12383812 intergenic not near genes chrX 12385815 intergenic not near genes chrX_7_12380001 chrX_12380001 RAL-373_125b 3678 chrX 12465428 12465495 chrX 12465554 12465621 9 124 4.5 0.0 2.2 2.8 193 chrX 12465428 exon CG42258 + chrX 12465524 intron CG42258 + chrX 12465621 intron CG42258 + chrX_9_12465001 chrX_12465001 RAL-373_125b 3679 chrX 12469879 12469905 chrX 12470006 12470050 5 145 3.0 1.5 2.2 1.6 171 chrX 12469879 intron CG42258 + chrX 12469964 intron CG42258 + chrX 12470050 intron CG42258 + chrX_5_12465001 chrX_12465001 RAL-373_125b 3680 chrX 12499895 12499966 chrX 12500077 12500150 13 179 4.0 3.0 3.5 2.9 255 chrX 12499895 intron CG2556 + chrX 12500022 intron CG2556 + chrX 12500150 intron CG2556 + chrX_13_12500001 chrX_12500001 RAL-373_125b 3681 chrX 12532610 12532668 chrX 12532791 12532839 10 173 5.0 0.0 2.5 2.9 229 chrX 12532610 intron CG43921 - chrX 12532724 intron CG43921 - chrX 12532839 intron CG43921 - chrX_10_12530001 chrX_12530001 RAL-373_125b 3682 chrX 12635406 12635424 chrX 12635536 12635559 4 134 4.0 8.0 6.0 0.6 153 chrX 12635406 intron Tomosyn + chrX 12635482 intron Tomosyn + chrX 12635559 intron Tomosyn + chrX_4_12635001 chrX_12635001 RAL-373_125b 3683 chrX 12694888 12694934 chrX 12695015 12695062 6 128 1.5 1.5 1.5 2.4 174 chrX 12694888 intron Smr - chrX 12694975 intron Smr - chrX 12695062 intron Smr - chrX_6_12690001 chrX_12690001 RAL-373_125b 3684 chrX 12752239 12752304 chrX 12752366 12752441 12 134 5.0 6.0 5.5 1.8 202 chrX 12752239 5` UTR CR44619 + chrX 12752340 5` UTR CR44619 + chrX 12752441 intron CR44619 + chrX_12_12750001 chrX_12750001 RAL-373_125b 3685 chrX 12785382 12785428 chrX 12785509 12785555 7 126 4.5 5.5 5.0 1.2 173 chrX 12785382 intergenic Pde9 -,CG32647 - chrX 12785468 intergenic Pde9 - chrX 12785555 intergenic Pde9 - chrX_7_12785001 chrX_12785001 RAL-373_125b 3686 chrX 12823164 12823217 chrX 12823291 12823344 8 126 3.5 2.0 2.8 2.1 180 chrX 12823164 intron Pde9 - chrX 12823254 intron Pde9 - chrX 12823344 intron Pde9 - chrX_8_12820001 chrX_12820001 RAL-373_125b 3687 chrX 12930566 12930604 chrX 12937725 12937760 HMS-Beagle 9 7161 2.0 7.5 4.8 1.6 7194 chrX 12930566 intron fne + chrX 12934163 intron fne + chrX 12937760 intron fne + chrX_9_12930001 chrX_12930001 RAL-373_125b 3688 chrX 12953840 12953919 chrX 12954028 12954106 11 187 1.0 1.5 1.2 5.0 266 chrX 12953840 intron hec - chrX 12953973 intron hec - chrX 12954106 intron hec - chrX_11_12950001 chrX_12950001 RAL-373_125b 3689 chrX 12960719 12960788 chrX 12960850 12960919 9 130 3.0 3.5 3.2 2.1 200 chrX 12960719 3` UTR CG32642 + chrX 12960819 intergenic CG32642 + chrX 12960919 intergenic CG32642 + chrX_9_12960001 chrX_12960001 RAL-373_125b 3690 chrX 12977044 12977060 chrX 12977170 12977186 6 125 0.5 6.5 3.5 1.3 142 chrX 12977044 intergenic not near genes chrX 12977115 intergenic not near genes chrX 12977186 intergenic not near genes chrX_6_12975001 chrX_12975001 RAL-373_125b 3691 chrX 13061305 13061364 chrX 13061466 13061503 12 152 4.5 3.5 4.0 2.4 198 chrX 13061305 intron rad + chrX 13061404 intron rad + chrX 13061503 intron rad + chrX_12_13060001 chrX_13060001 RAL-373_125b 3692 chrX 13146555 13146622 chrX 13146693 13146760 14 137 6.0 2.5 4.2 2.7 205 chrX 13146555 intron CG32645 + chrX 13146658 intron CG32645 + chrX 13146760 intron CG32645 + chrX_14_13145001 chrX_13145001 RAL-373_125b 3693 chrX 13173102 13173113 chrX 13173224 13173250 6 127 59.0 56.0 57.5 0.1 148 chrX 13173102 exon CG34411 - chrX 13173176 exon CG34411 - chrX 13173250 intron CG34411 - chrX_6_13170001 chrX_13170001 RAL-373_125b 3694 chrX 13173115 13173150 chrX 13173217 13173287 12 126 58.0 55.0 56.5 0.2 172 chrX 13173115 exon CG34411 - chrX 13173201 intron CG34411 - chrX 13173287 intron CG34411 - chrX_12_13170001 chrX_13170001 RAL-373_125b 3695 chrX 13347001 13347041 chrX 13347158 13347198 8 162 0.0 8.0 4.0 1.6 197 chrX 13347001 intergenic not near genes chrX 13347100 intergenic not near genes chrX 13347198 intergenic not near genes chrX_8_13345001 chrX_13345001 RAL-373_125b 3696 chrX 13360190 13360259 chrX 13360348 13360417 19 154 2.5 3.0 2.8 5.0 227 chrX 13360190 intron Syt12 + chrX 13360304 intron Syt12 + chrX 13360417 intron Syt12 + chrX_19_13360001 chrX_13360001 RAL-373_125b 3697 chrX 13374796 13374849 chrX 13374923 13374978 14 121 2.5 5.0 3.8 2.9 182 chrX 13374796 intron CG1640 + chrX 13374887 intron CG1640 + chrX 13374978 intron CG1640 + chrX_14_13370001 chrX_13370001 RAL-373_125b 3698 chrX 13393154 13393187 chrX 13393289 13393319 11 140 4.5 3.5 4.0 2.2 165 chrX 13393154 intergenic not near genes chrX 13393236 intergenic not near genes chrX 13393319 intergenic not near genes chrX_11_13390001 chrX_13390001 RAL-373_125b 3699 chrX 13401442 13401476 chrX 13401842 13401878 jockey 4 402 5.5 5.0 5.2 0.6 436 chrX 13401442 intergenic CG1673 +,CG12725 - chrX 13401660 intergenic CG12725 -,CG1673 + chrX 13401878 3` UTR CG12725 - chrX_4_13400001 chrX_13400001 RAL-373_125b 3700 chrX 13429422 13429486 chrX 13430616 13430679 jockey 7 1194 0.0 6.5 3.2 1.7 1257 chrX 13429422 intergenic not near genes chrX 13430050 intergenic not near genes chrX 13430679 intergenic not near genes chrX_7_13430001 chrX_13430001 RAL-373_125b 3701 chrX 13442120 13442169 chrX 13442261 13442299 7 137 0.0 4.5 2.2 2.2 179 chrX 13442120 intergenic not near genes chrX 13442210 intergenic not near genes chrX 13442299 intergenic not near genes chrX_7_13440001 chrX_13440001 RAL-373_125b 3702 chrX 13463609 13463664 chrX 13469236 13469291 mdg3 13 5627 7.5 7.0 7.2 1.6 5682 chrX 13463609 intron Neto + chrX 13466450 intron Neto + chrX 13469291 intron Neto + chrX_13_13465001 chrX_13465001 RAL-373_125b 3703 chrX 13734057 13734111 chrX 13734203 13734251 10 140 5.5 5.5 5.5 1.5 194 chrX 13734057 intron g - chrX 13734154 intron g - chrX 13734251 intron g - chrX_10_13730001 chrX_13730001 RAL-373_125b 3704 chrX 13738982 13739055 chrX 13739113 13739186 20 128 4.0 8.0 6.0 2.9 204 chrX 13738982 intron,intron Grip91 -,CG11134 + chrX 13739084 intron,3` UTR Grip91 -,CG11134 + chrX 13739186 intron Grip91 - chrX_20_13735001 chrX_13735001 RAL-373_125b 3705 chrX 13795502 13795510 chrX 13798786 13798800 4 3286 26.5 8.5 17.5 0.2 3298 chrX 13795502 intron inaE + chrX 13797151 intron,exon inaE +,CG10996 - chrX 13798800 intron inaE + chrX_4_13795001 chrX_13795001 RAL-373_125b 3706 chrX 13821435 13821476 chrX 13821548 13821590 8 116 2.0 5.0 3.5 1.8 155 chrX 13821435 intron Clic - chrX 13821512 intron Clic - chrX 13821590 intron Clic - chrX_8_13820001 chrX_13820001 RAL-373_125b 3707 chrX 13843354 13843368 chrX 13843481 13843495 4 127 11.5 0.0 5.8 0.6 141 chrX 13843354 intron AMPdeam - chrX 13843424 intron AMPdeam - chrX 13843495 intron AMPdeam - chrX_4_13840001 chrX_13840001 RAL-373_125b 3708 chrX 13875910 13875989 chrX 13876039 13876145 4 142 1.0 0.0 0.5 2.7 235 chrX 13875910 intron mamo - chrX 13876028 intron mamo - chrX 13876145 intron mamo - chrX_4_13875001 chrX_13875001 RAL-373_125b 3709 chrX 13880226 13880241 chrX 13880353 13880365 5 125 7.0 4.0 5.5 0.8 139 chrX 13880226 intron mamo - chrX 13880296 intron mamo - chrX 13880365 intron mamo - chrX_5_13880001 chrX_13880001 RAL-373_125b 3710 chrX 13934296 13934314 chrX 13934429 13934441 5 130 3.0 6.5 4.8 0.9 145 chrX 13934296 intron mamo - chrX 13934368 intron mamo - chrX 13934441 intron mamo - chrX_5_13930001 chrX_13930001 RAL-373_125b 3711 chrX 13935495 13935525 chrX 13935606 13935653 14 125 4.5 8.5 6.5 1.9 158 chrX 13935495 intron mamo - chrX 13935574 intron mamo - chrX 13935653 intron mamo - chrX_14_13935001 chrX_13935001 RAL-373_125b 3712 chrX 13943278 13943296 chrX 13943397 13943426 5 128 0.0 7.0 3.5 1.1 148 chrX 13943278 intron mamo - chrX 13943352 intron mamo - chrX 13943426 intron mamo - chrX_5_13940001 chrX_13940001 RAL-373_125b 3713 chrX 13975884 13975891 chrX 13976011 13976018 4 126 0.0 10.5 5.2 0.6 134 chrX 13975884 intron mamo - chrX 13975951 intron mamo - chrX 13976018 intron mamo - chrX_4_13975001 chrX_13975001 RAL-373_125b 3714 chrX 14025961 14026015 chrX 14026711 14026770 11 753 8.0 6.0 7.0 1.4 809 chrX 14025961 intergenic not near genes chrX 14026366 intergenic not near genes chrX 14026770 intergenic not near genes chrX_11_14025001 chrX_14025001 RAL-373_125b 3715 chrX 14104999 14105032 chrX 14114198 14114227 roo 11 9197 2.5 4.5 3.5 2.4 9228 chrX 14104999 intergenic not near genes chrX 14109613 intergenic not near genes chrX 14114227 5` UTR CR44657 + chrX_11_14105001 chrX_14105001 RAL-373_125b 3716 chrX 14105035 14105045 chrX 14114191 14114236 roo 6 9184 2.5 4.0 3.2 1.4 9201 chrX 14105035 intergenic not near genes chrX 14109636 intergenic not near genes chrX 14114236 5` UTR CR44657 + chrX_6_14105001 chrX_14105001 RAL-373_125b 3717 chrX 14131449 14131501 chrX 14131577 14131632 10 122 1.5 6.5 4.0 2.0 183 chrX 14131449 intergenic not near genes chrX 14131540 intergenic not near genes chrX 14131632 intergenic not near genes chrX_10_14130001 chrX_14130001 RAL-373_125b 3718 chrX 14131504 14131522 chrX 14131573 14131628 10 116 1.0 5.5 3.2 2.4 124 chrX 14131504 intergenic not near genes chrX 14131566 intergenic not near genes chrX 14131628 intergenic not near genes chrX_10_14130001 chrX_14130001 RAL-373_125b 3719 chrX 14157552 14157567 chrX 14163259 14163274 297 6 5707 10.0 4.5 7.2 0.7 5722 chrX 14157552 intergenic not near genes chrX 14160413 intergenic not near genes chrX 14163274 intergenic not near genes chrX_6_14160001 chrX_14160001 RAL-373_125b 3720 chrX 14381365 14381410 chrX 14381569 14381604 9 203 2.5 2.5 2.5 2.6 239 chrX 14381365 intron,3` UTR dpr8 +,betaNACtes4 + chrX 14381484 intron dpr8 + chrX 14381604 intron dpr8 + chrX_9_14380001 chrX_14380001 RAL-373_125b 3721 chrX 14404970 14405026 chrX 14405097 14405154 16 126 5.5 7.0 6.2 2.2 184 chrX 14404970 intron dpr8 + chrX 14405062 intron dpr8 + chrX 14405154 intron dpr8 + chrX_16_14405001 chrX_14405001 RAL-373_125b 3722 chrX 14416269 14416321 chrX 14421086 14421138 F-element 6 4815 4.0 2.5 3.2 1.4 4869 chrX 14416269 intron dpr8 + chrX 14418704 intron dpr8 + chrX 14421138 intron dpr8 + chrX_6_14415001 chrX_14415001 RAL-373_125b 3723 chrX 14484920 14484982 chrX 14485059 14485121 13 137 0.0 4.0 2.0 4.3 201 chrX 14484920 intergenic not near genes chrX 14485020 intergenic not near genes chrX 14485121 intergenic not near genes chrX_13_14485001 chrX_14485001 RAL-373_125b 3724 chrX 14573980 14574057 chrX 14574129 14574140 25 140 6.5 4.5 5.5 3.8 160 chrX 14573980 intergenic not near genes chrX 14574060 intergenic not near genes chrX 14574140 intergenic not near genes chrX_25_14570001 chrX_14570001 RAL-373_125b 3725 chrX 14597693 14597752 chrX 14597815 14597879 18 124 4.5 2.5 3.5 4.0 186 chrX 14597693 intron CG9413 - chrX 14597786 intron CG9413 - chrX 14597879 intron CG9413 - chrX_18_14595001 chrX_14595001 RAL-373_125b 3726 chrX 14636429 14636475 chrX 14641920 14641966 I-element 12 5489 4.5 9.0 6.8 1.5 5537 chrX 14636429 intron NetA - chrX 14639198 intron NetA - chrX 14641966 intron NetA - chrX_12_14635001 chrX_14635001 RAL-373_125b 3727 chrX 14713993 14714063 chrX 14714125 14714195 17 131 3.0 3.5 3.2 4.0 202 chrX 14713993 intron NetB - chrX 14714094 intron NetB - chrX 14714195 intron NetB - chrX_17_14710001 chrX_14710001 RAL-373_125b 3728 chrX 14767915 14767954 chrX 14768025 14768079 10 127 6.5 0.5 3.5 2.2 164 chrX 14767915 intergenic not near genes chrX 14767997 intergenic not near genes chrX 14768079 intergenic not near genes chrX_10_14765001 chrX_14765001 RAL-373_125b 3729 chrX 14778006 14778029 chrX 14782833 14782866 Doc 5 4840 6.0 5.0 5.5 0.8 4860 chrX 14778006 intergenic CG5347 + chrX 14780436 intergenic not near genes chrX 14782866 intergenic Ag5r2 - chrX_5_14780001 chrX_14780001 RAL-373_125b 3730 chrX 14818717 14818794 chrX 14823971 14824037 copia 24 5248 5.0 5.5 5.2 3.9 5320 chrX 14818717 intron rut - chrX 14821377 intron rut - chrX 14824037 intron rut - chrX_24_14820001 chrX_14820001 RAL-373_125b 3731 chrX 14861928 14861992 chrX 14862092 14862156 20 166 33.0 34.5 33.8 0.6 228 chrX 14861928 intron Flo2 + chrX 14862042 intron Flo2 + chrX 14862156 intron Flo2 + chrX_20_14860001 chrX_14860001 RAL-373_125b 3732 chrX 14903280 14903342 chrX 14903411 14903447 14 123 5.0 3.5 4.2 2.7 167 chrX 14903280 intron,intron Flo2 +,CG9512 - chrX 14903364 intron,intron Flo2 +,CG9512 - chrX 14903447 intron,intron Flo2 +,CG9512 - chrX_14_14900001 chrX_14900001 RAL-373_125b 3733 chrX 14936822 14936884 chrX 14946129 14946191 roo 19 9306 4.5 4.0 4.2 3.7 9369 chrX 14936822 intron pdgy - chrX 14941506 intron pdgy - chrX 14946191 intron pdgy - chrX_19_14940001 chrX_14940001 RAL-373_125b 3734 chrX 15017940 15017945 chrX 15018104 15018108 INE-1 4 164 6.0 5.5 5.8 0.6 168 chrX 15017940 exon hiw - chrX 15018024 intron hiw - chrX 15018108 intron hiw - chrX_4_15015001 chrX_15015001 RAL-373_125b 3735 chrX 15059126 15059157 chrX 15059282 15059313 8 156 7.5 6.0 6.8 1.0 187 chrX 15059126 exon hiw - chrX 15059220 intron hiw - chrX 15059313 intron hiw - chrX_8_15055001 chrX_15055001 RAL-373_125b 3736 chrX 15116859 15116915 chrX 15117026 15117082 15 166 6.5 7.5 7.0 1.9 223 chrX 15116859 intergenic Cyp4s3 - chrX 15116970 intergenic Cyp4s3 - chrX 15117082 intergenic not near genes chrX_15_15115001 chrX_15115001 RAL-373_125b 3737 chrX 15200608 15200639 chrX 15200734 15200765 6 125 3.0 3.0 3.0 1.5 157 chrX 15200608 intergenic not near genes chrX 15200686 intergenic not near genes chrX 15200765 intergenic not near genes chrX_6_15200001 chrX_15200001 RAL-373_125b 3738 chrX 15202031 15202086 chrX 15202187 15202242 5 156 10.0 5.0 7.5 0.6 211 chrX 15202031 intergenic not near genes chrX 15202136 intergenic not near genes chrX 15202242 intergenic not near genes chrX_5_15200001 chrX_15200001 RAL-373_125b 3739 chrX 15273662 15273733 chrX 15274879 15274920 1360 11 1203 4.5 9.5 7.0 1.4 1258 chrX 15273662 intergenic not near genes chrX 15274291 intergenic not near genes chrX 15274920 intergenic not near genes chrX_11_15270001 chrX_15270001 RAL-373_125b 3740 chrX 15326709 15326718 chrX 15326947 15326966 I-element 6 243 0.0 3.0 1.5 2.4 257 chrX 15326709 3` UTR Top1 + chrX 15326838 3` UTR Top1 + chrX 15326966 3` UTR Top1 + chrX_6_15325001 chrX_15325001 RAL-373_125b 3741 chrX 15392799 15392846 chrX 15392932 15392969 9 121 5.0 8.0 6.5 1.2 170 chrX 15392799 exon Cngl - chrX 15392884 exon Cngl - chrX 15392969 exon Cngl - chrX_9_15390001 chrX_15390001 RAL-373_125b 3742 chrX 15413009 15413071 chrX 15417361 15417396 Juan 11 4344 4.0 0.0 2.0 3.7 4387 chrX 15413009 intron Cngl - chrX 15415202 intron Cngl - chrX 15417396 intron Cngl - chrX_11_15415001 chrX_15415001 RAL-373_125b 3743 chrX 15421874 15421945 chrX 15423435 15423506 pogo 14 1556 6.0 6.5 6.2 1.9 1632 chrX 15421874 intron Cngl - chrX 15422690 intron Cngl - chrX 15423506 intron Cngl - chrX_14_15420001 chrX_15420001 RAL-373_125b 3744 chrX 15435621 15435696 chrX 15436108 15436179 rover 7 483 7.5 3.5 5.5 1.1 558 chrX 15435621 intron Cngl - chrX 15435900 intron Cngl - chrX 15436179 intron Cngl - chrX_7_15435001 chrX_15435001 RAL-373_125b 3745 chrX 15443099 15443115 chrX 15443228 15443229 4 125 0.0 0.5 0.2 3.3 130 chrX 15443099 intergenic not near genes chrX 15443164 intergenic not near genes chrX 15443229 intergenic not near genes chrX_4_15440001 chrX_15440001 RAL-373_125b 3746 chrX 15455503 15455576 chrX 15455630 15455702 9 124 4.5 3.0 3.8 1.9 199 chrX 15455503 3` UTR CG11655 + chrX 15455602 3` UTR shtd - chrX 15455702 3` UTR shtd - chrX_9_15455001 chrX_15455001 RAL-373_125b 3747 chrX 15519751 15519819 chrX 15519879 15519937 19 122 3.5 3.0 3.2 4.5 186 chrX 15519751 intron Ac13E - chrX 15519844 intron Ac13E - chrX 15519937 exon Ac13E - chrX_19_15515001 chrX_15515001 RAL-373_125b 3748 chrX 15536658 15536698 chrX 15536785 15536823 10 118 14.5 13.5 14.0 0.7 165 chrX 15536658 intron Ac13E - chrX 15536740 intron Ac13E - chrX 15536823 intron Ac13E - chrX_10_15535001 chrX_15535001 RAL-373_125b 3749 chrX 15591190 15591206 chrX 15591311 15591326 5 123 0.5 5.5 3.0 1.2 136 chrX 15591190 intron CG9220 - chrX 15591258 intron CG9220 - chrX 15591326 intron CG9220 - chrX_5_15590001 chrX_15590001 RAL-373_125b 3750 chrX 15648181 15648240 chrX 15648740 15648809 12 566 0.5 3.5 2.0 4.0 628 chrX 15648181 intergenic not near genes chrX 15648495 intergenic not near genes chrX 15648809 intergenic not near genes chrX_12_15645001 chrX_15645001 RAL-373_125b 3751 chrX 15659349 15659405 chrX 15659461 15659510 18 117 4.5 1.5 3.0 4.5 161 chrX 15659349 intergenic not near genes chrX 15659430 intergenic not near genes chrX 15659510 intergenic not near genes chrX_18_15655001 chrX_15655001 RAL-373_125b 3752 chrX 15669873 15669935 chrX 15670005 15670061 9 131 2.0 3.5 2.8 2.4 188 chrX 15669873 intron CG15646 - chrX 15669967 intron CG15646 - chrX 15670061 intron CG15646 - chrX_9_15665001 chrX_15665001 RAL-373_125b 3753 chrX 15677983 15678068 chrX 15678112 15678170 16 121 4.0 5.0 4.5 2.9 187 chrX 15677983 intergenic CG12708 + chrX 15678076 intergenic CG12708 + chrX 15678170 intergenic CG12708 + chrX_16_15675001 chrX_15675001 RAL-373_125b 3754 chrX 15681360 15681380 chrX 15681479 15681512 5 128 4.0 3.5 3.8 1.0 152 chrX 15681360 intergenic not near genes chrX 15681436 intergenic not near genes chrX 15681512 intergenic not near genes chrX_5_15680001 chrX_15680001 RAL-373_125b 3755 chrX 15749608 15749682 chrX 15749765 15749835 11 152 2.0 3.0 2.5 3.1 227 chrX 15749608 intron CG8239 + chrX 15749722 intron CG8239 + chrX 15749835 exon CG8239 + chrX_11_15745001 chrX_15745001 RAL-373_125b 3756 chrX 16075907 16075967 chrX 16076031 16076091 9 126 2.5 6.5 4.5 1.6 184 chrX 16075907 3` UTR Tob - chrX 16075999 3` UTR Tob - chrX 16076091 3` UTR Tob - chrX_9_16075001 chrX_16075001 RAL-373_125b 3757 chrX 16100508 16100586 chrX 16100637 16100716 13 127 5.0 4.5 4.8 2.2 208 chrX 16100508 intron,intron CG42353 -,CG42354 - chrX 16100612 intron,intron CG42353 -,CG42354 - chrX 16100716 intron,intron CG42353 -,CG42354 - chrX_13_16100001 chrX_16100001 RAL-373_125b 3758 chrX 16160259 16160302 chrX 16160385 16160428 8 124 3.0 3.0 3.0 2.0 169 chrX 16160259 intergenic not near genes chrX 16160344 intergenic not near genes chrX 16160428 intergenic not near genes chrX_8_16160001 chrX_16160001 RAL-373_125b 3759 chrX 16222740 16222802 chrX 16231135 16231196 roo 14 8398 4.5 3.5 4.0 2.8 8456 chrX 16222740 intergenic not near genes chrX 16226968 intergenic not near genes chrX 16231196 intergenic not near genes chrX_14_16225001 chrX_16225001 RAL-373_125b 3760 chrX 16258709 16258759 chrX 16258848 16258899 11 134 1.0 0.0 0.5 7.3 190 chrX 16258709 intergenic not near genes chrX 16258804 intergenic not near genes chrX 16258899 intergenic not near genes chrX_11_16255001 chrX_16255001 RAL-373_125b 3761 chrX 16295486 16295549 chrX 16295620 16295677 8 130 4.5 0.0 2.2 2.5 191 chrX 16295486 intron CG9911 - chrX 16295582 intron CG9911 - chrX 16295677 intron CG9911 - chrX_8_16295001 chrX_16295001 RAL-373_125b 3762 chrX 16329361 16329443 chrX 16329508 16329575 7 140 0.0 7.5 3.8 1.5 214 chrX 16329361 exon CG9919 - chrX 16329468 intron CG9919 - chrX 16329575 exon CG9919 - chrX_7_16325001 chrX_16325001 RAL-373_125b 3763 chrX 16340619 16340695 chrX 16349824 16349897 roo 15 9203 1.0 4.5 2.8 3.9 9278 chrX 16340619 3` UTR Dsp1 + chrX 16345258 intergenic not near genes chrX 16349897 intergenic sl + chrX_15_16345001 chrX_16345001 RAL-373_125b 3764 chrX 16404320 16404376 chrX 16404461 16404510 13 144 3.0 4.5 3.8 2.7 190 chrX 16404320 intron CG9981 - chrX 16404415 intron CG9981 - chrX 16404510 5` UTR CG9981 - chrX_13_16400001 chrX_16400001 RAL-373_125b 3765 chrX 16492621 16492671 chrX 16498237 16498298 mdg3 5 5623 4.5 6.5 5.5 0.8 5677 chrX 16492621 intron para - chrX 16495460 intron para - chrX 16498298 exon para - chrX_5_16495001 chrX_16495001 RAL-373_125b 3766 chrX 16569657 16569687 chrX 16569798 16569823 5 142 9.5 9.0 9.2 0.5 166 chrX 16569657 intron CanA-14F - chrX 16569740 intron CanA-14F - chrX 16569823 intron CanA-14F - chrX_5_16565001 chrX_16565001 RAL-373_125b 3767 chrX 16586386 16586451 chrX 16586533 16586598 19 144 4.5 2.0 3.2 4.5 212 chrX 16586386 5` UTR CanA-14F - chrX 16586492 5` UTR CanA-14F - chrX 16586598 5` UTR CanA-14F - chrX_19_16585001 chrX_16585001 RAL-373_125b 3768 chrX 16650894 16650959 chrX 16651011 16651088 8 125 3.5 7.5 5.5 1.2 194 chrX 16650894 intergenic CG32573 +,CG42512 + chrX 16650991 intergenic CG32573 +,CG42512 + chrX 16651088 intergenic CG32573 +,CG42512 + chrX_8_16650001 chrX_16650001 RAL-373_125b 3769 chrX 16689593 16689640 chrX 16689714 16689776 13 123 9.5 2.5 6.0 1.9 183 chrX 16689593 intron Sep4 - chrX 16689684 intron Sep4 - chrX 16689776 intron Sep4 - chrX_13_16685001 chrX_16685001 RAL-373_125b 3770 chrX 16707958 16707972 chrX 16708142 16708156 4 184 0.0 4.5 2.2 1.2 198 chrX 16707958 intron CG4678 + chrX 16708057 intron CG4678 + chrX 16708156 intron CG4678 + chrX_4_16705001 chrX_16705001 RAL-373_125b 3771 chrX 16821187 16821264 chrX 16821317 16821389 17 128 4.0 1.0 2.5 4.9 202 chrX 16821187 intron CG4829 + chrX 16821288 intron CG4829 + chrX 16821389 intron CG4829 + chrX_17_16820001 chrX_16820001 RAL-373_125b 3772 chrX 16867750 16867773 chrX 16867878 16867901 8 128 3.5 3.5 3.5 1.8 151 chrX 16867750 intron CG13003 - chrX 16867826 intron CG13003 - chrX 16867901 intron CG13003 - chrX_8_16865001 chrX_16865001 RAL-373_125b 3773 chrX 16891323 16891355 chrX 16891454 16891492 7 136 5.5 5.5 5.5 1.1 169 chrX 16891323 intergenic not near genes chrX 16891408 intergenic not near genes chrX 16891492 intergenic not near genes chrX_7_16890001 chrX_16890001 RAL-373_125b 3774 chrX 16935985 16936025 chrX 16936448 16936468 jockey 11 461 7.5 4.5 6.0 1.6 483 chrX 16935985 intron CG4928 + chrX 16936226 intron CG4928 + chrX 16936468 intron CG4928 + chrX_11_16935001 chrX_16935001 RAL-373_125b 3775 chrX 16951300 16951350 chrX 16951411 16951469 14 119 3.5 5.5 4.5 2.5 169 chrX 16951300 exon RhoGAP15B + chrX 16951384 exon RhoGAP15B + chrX 16951469 exon RhoGAP15B + chrX_14_16950001 chrX_16950001 RAL-373_125b 3776 chrX 16965488 16965559 chrX 16965627 16965698 16 141 3.5 3.0 3.2 3.8 210 chrX 16965488 intron CG9086 - chrX 16965593 intron CG9086 - chrX 16965698 intron CG9086 - chrX_16_16965001 chrX_16965001 RAL-373_125b 3777 chrX 16983076 16983076 chrX 19404963 19404963 4 2421887 20.0 9.0 14.5 0.3 2421887 chrX 16983076 intron CG45002 - chrX 18194020 intron Frq2 + chrX 19404963 intron kek5 + chrX_4_18190001 chrX_18190001 RAL-373_125b 3778 chrX 17011919 17011988 chrX 17012052 17012121 11 129 3.5 5.5 4.5 2.0 202 chrX 17011919 intron CG45002 - chrX 17012020 intron CG45002 - chrX 17012121 intron CG45002 - chrX_11_17010001 chrX_17010001 RAL-373_125b 3779 chrX 17057932 17057956 chrX 17058197 17058247 pogo 5 286 1.5 4.5 3.0 1.2 315 chrX 17057932 intron CG45002 - chrX 17058090 intron CG45002 - chrX 17058247 intron CG45002 - chrX_5_17055001 chrX_17055001 RAL-373_125b 3780 chrX 17063143 17063159 chrX 17063280 17063296 7 137 9.0 7.0 8.0 0.8 153 chrX 17063143 intron CG45002 - chrX 17063220 intron CG45002 - chrX 17063296 intron CG45002 - chrX_7_17060001 chrX_17060001 RAL-373_125b 3781 chrX 17063162 17063201 chrX 17063274 17063338 6 130 2.5 7.0 4.8 1.0 176 chrX 17063162 intron CG45002 - chrX 17063250 intron CG45002 - chrX 17063338 intron CG45002 - chrX_6_17060001 chrX_17060001 RAL-373_125b 3782 chrX 17088188 17088199 chrX 17088831 17088842 4 643 0.0 10.0 5.0 0.7 654 chrX 17088188 intergenic not near genes chrX 17088515 intergenic not near genes chrX 17088842 intergenic not near genes chrX_4_17085001 chrX_17085001 RAL-373_125b 3783 chrX 17195164 17195230 chrX 17200300 17200345 flea 11 5134 10.0 7.5 8.8 1.1 5181 chrX 17195164 3` UTR baz + chrX 17197754 3` UTR baz + chrX 17200345 3` UTR baz + chrX_11_17195001 chrX_17195001 RAL-373_125b 3784 chrX 17205803 17205853 chrX 17205943 17205993 10 140 5.5 8.5 7.0 1.2 190 chrX 17205803 intergenic not near genes chrX 17205898 intergenic not near genes chrX 17205993 intergenic CG32564 + chrX_10_17205001 chrX_17205001 RAL-373_125b 3785 chrX 17352561 17352612 chrX 17352705 17352765 11 144 0.0 6.5 3.2 2.6 204 chrX 17352561 intergenic not near genes chrX 17352663 intergenic not near genes chrX 17352765 intergenic not near genes chrX_11_17350001 chrX_17350001 RAL-373_125b 3786 chrX 17364395 17364462 chrX 17364548 17364615 13 152 6.0 3.0 4.5 2.4 220 chrX 17364395 intergenic not near genes chrX 17364505 intergenic not near genes chrX 17364615 intergenic not near genes chrX_13_17360001 chrX_17360001 RAL-373_125b 3787 chrX 17372197 17372253 chrX 17372336 17372386 9 137 0.0 6.5 3.2 2.1 189 chrX 17372197 intergenic not near genes chrX 17372292 intergenic not near genes chrX 17372386 intergenic not near genes chrX_9_17370001 chrX_17370001 RAL-373_125b 3788 chrX 17427002 17427072 chrX 17427139 17427209 12 133 6.0 6.0 6.0 1.7 207 chrX 17427002 intron,intron CG12994 -,CG5613 + chrX 17427106 intron,intron CG12994 -,CG5613 + chrX 17427209 intron,intron CG12994 -,CG5613 + chrX_12_17425001 chrX_17425001 RAL-373_125b 3789 chrX 17431317 17431341 chrX 17431698 17431727 jockey 6 387 11.0 4.5 7.8 0.7 410 chrX 17431317 intron CG12994 - chrX 17431522 intron CG12994 - chrX 17431727 intron CG12994 - chrX_6_17430001 chrX_17430001 RAL-373_125b 3790 chrX 17434404 17434444 chrX 17434542 17434586 8 141 4.0 0.0 2.0 2.7 182 chrX 17434404 intron CG12994 - chrX 17434495 intron CG12994 - chrX 17434586 intron CG12994 - chrX_8_17430001 chrX_17430001 RAL-373_125b 3791 chrX 17443072 17443104 chrX 17443246 17443278 5 173 5.5 2.0 3.8 1.0 206 chrX 17443072 intron CG12994 - chrX 17443175 intron CG12994 - chrX 17443278 intron CG12994 - chrX_5_17440001 chrX_17440001 RAL-373_125b 3792 chrX 17716543 17716593 chrX 17716680 17716723 8 133 1.5 4.5 3.0 2.0 180 chrX 17716543 intron CG42684 + chrX 17716633 intron CG42684 + chrX 17716723 intron CG42684 + chrX_8_17715001 chrX_17715001 RAL-373_125b 3793 chrX 17741294 17741363 chrX 17741484 17741552 16 194 0.0 7.0 3.5 3.6 258 chrX 17741294 intron CG42684 + chrX 17741423 intron CG42684 + chrX 17741552 intron CG42684 + chrX_16_17740001 chrX_17740001 RAL-373_125b 3794 chrX 17745551 17745561 chrX 17745691 17745701 8 138 10.0 5.0 7.5 0.9 150 chrX 17745551 intron CG42684 + chrX 17745626 intron CG42684 + chrX 17745701 intron CG42684 + chrX_8_17745001 chrX_17745001 RAL-373_125b 3795 chrX 17745565 17745614 chrX 17745685 17745754 11 134 6.0 3.5 4.8 1.9 189 chrX 17745565 intron CG42684 + chrX 17745660 intron CG42684 + chrX 17745754 intron CG42684 + chrX_11_17745001 chrX_17745001 RAL-373_125b 3796 chrX 17782176 17782228 chrX 17782324 17782376 12 146 5.0 2.5 3.8 2.5 200 chrX 17782176 intergenic not near genes chrX 17782276 intergenic not near genes chrX 17782376 intergenic not near genes chrX_12_17780001 chrX_17780001 RAL-373_125b 3797 chrX 17782537 17782594 chrX 17782660 17782718 11 127 4.5 5.0 4.8 1.9 181 chrX 17782537 intergenic not near genes chrX 17782628 intergenic not near genes chrX 17782718 intergenic not near genes chrX_11_17780001 chrX_17780001 RAL-373_125b 3798 chrX 17792923 17792973 chrX 17796255 17796321 flea 11 3343 5.0 5.5 5.2 1.8 3398 chrX 17792923 intron OdsH + chrX 17794622 intron OdsH + chrX 17796321 intron OdsH + chrX_11_17790001 chrX_17790001 RAL-373_125b 3799 chrX 17911812 17911870 chrX 17911938 17912008 8 132 2.0 1.5 1.8 2.9 196 chrX 17911812 intron CG6847 + chrX 17911910 intron CG6847 + chrX 17912008 intron CG6847 + chrX_8_17910001 chrX_17910001 RAL-373_125b 3800 chrX 17968861 17968908 chrX 17969025 17969076 9 166 1.5 5.0 3.2 2.1 215 chrX 17968861 intron Sh - chrX 17968968 intron Sh - chrX 17969076 intron Sh - chrX_9_17965001 chrX_17965001 RAL-373_125b 3801 chrX 18020794 18020814 chrX 18020931 18020951 6 135 6.0 4.0 5.0 1.0 157 chrX 18020794 intron Sh - chrX 18020872 intron Sh - chrX 18020951 intron Sh - chrX_6_18020001 chrX_18020001 RAL-373_125b 3802 chrX 18141036 18141090 chrX 18141162 18141216 11 125 0.0 6.0 3.0 2.8 180 chrX 18141036 intergenic not near genes chrX 18141126 intergenic not near genes chrX 18141216 intergenic not near genes chrX_11_18140001 chrX_18140001 RAL-373_125b 3803 chrX 18148587 18148609 chrX 18148740 18148762 5 153 1.5 2.5 2.0 1.7 175 chrX 18148587 intergenic not near genes chrX 18148674 intergenic not near genes chrX 18148762 intergenic not near genes chrX_5_18145001 chrX_18145001 RAL-373_125b 3804 chrX 18154449 18154495 chrX 18154611 18154654 12 160 1.0 5.5 3.2 2.9 205 chrX 18154449 intergenic not near genes chrX 18154552 intergenic not near genes chrX 18154654 intergenic not near genes chrX_12_18150001 chrX_18150001 RAL-373_125b 3805 chrX 18177000 18177017 chrX 18177138 18177160 5 140 3.0 2.5 2.8 1.3 160 chrX 18177000 intergenic not near genes chrX 18177080 intergenic not near genes chrX 18177160 intergenic Frq2 + chrX_5_18175001 chrX_18175001 RAL-373_125b 3806 chrX 18194035 18194089 chrX 18194615 18194674 BS 16 582 3.5 5.0 4.2 3.1 639 chrX 18194035 intron Frq2 + chrX 18194354 intron Frq2 + chrX 18194674 intron Frq2 + chrX_16_18190001 chrX_18190001 RAL-373_125b 3807 chrX 18320453 18320456 chrX 18320635 18320638 4 182 0.5 2.5 1.5 1.6 185 chrX 18320453 intron CG6023 - chrX 18320546 intron CG6023 - chrX 18320638 intron CG6023 - chrX_4_18320001 chrX_18320001 RAL-373_125b 3808 chrX 18320458 18320487 chrX 18320630 18320669 6 180 0.5 2.0 1.2 2.7 211 chrX 18320458 intron CG6023 - chrX 18320564 intron CG6023 - chrX 18320669 intron CG6023 - chrX_6_18320001 chrX_18320001 RAL-373_125b 3809 chrX 18427345 18427396 chrX 18427799 18427857 11 457 7.5 2.0 4.8 1.9 512 chrX 18427345 intergenic CG42323 + chrX 18427601 intergenic not near genes chrX 18427857 intergenic not near genes chrX_11_18425001 chrX_18425001 RAL-373_125b 3810 chrX 18429452 18429511 chrX 18434813 18434872 Transpac 7 5359 7.0 5.5 6.2 1.0 5420 chrX 18429452 intergenic not near genes chrX 18432162 intergenic not near genes chrX 18434872 intergenic not near genes chrX_7_18430001 chrX_18430001 RAL-373_125b 3811 chrX 18490006 18490057 chrX 18490200 18490262 10 200 4.0 6.0 5.0 1.7 256 chrX 18490006 intergenic CG15046 - chrX 18490134 intergenic not near genes chrX 18490262 intergenic not near genes chrX_10_18490001 chrX_18490001 RAL-373_125b 3812 chrX 18529344 18529399 chrX 18529470 18529525 8 124 2.0 2.0 2.0 2.7 181 chrX 18529344 intron,3` UTR Bx +,CG15047 + chrX 18529434 intron,3` UTR Bx +,CG15047 + chrX 18529525 intron,3` UTR Bx +,CG15047 + chrX_8_18525001 chrX_18525001 RAL-373_125b 3813 chrX 18558729 18558804 chrX 18558861 18558916 17 126 3.5 5.0 4.2 3.3 187 chrX 18558729 intron Bx + chrX 18558822 intron Bx + chrX 18558916 intron Bx + chrX_17_18555001 chrX_18555001 RAL-373_125b 3814 chrX 18644991 18645040 chrX 18645118 18645167 18 140 7.5 7.0 7.2 2.2 176 chrX 18644991 intron Rip11 - chrX 18645079 intron Rip11 - chrX 18645167 intron Rip11 - chrX_18_18645001 chrX_18645001 RAL-373_125b 3815 chrX 18698805 18698872 chrX 18698967 18699039 16 165 2.5 2.5 2.5 4.6 234 chrX 18698805 intergenic not near genes chrX 18698922 intergenic not near genes chrX 18699039 intergenic not near genes chrX_16_18695001 chrX_18695001 RAL-373_125b 3816 chrX 18764476 18764517 chrX 18764575 18764652 11 127 3.5 3.0 3.2 2.6 176 chrX 18764476 intergenic CCKLR-17D3 - chrX 18764564 3` UTR CCKLR-17D3 - chrX 18764652 3` UTR CCKLR-17D3 - chrX_11_18760001 chrX_18760001 RAL-373_125b 3817 chrX 18774415 18774421 chrX 18774550 18774556 5 135 13.0 9.5 11.2 0.4 141 chrX 18774415 intergenic CCKLR-17D3 - chrX 18774486 intergenic CCKLR-17D3 - chrX 18774556 intergenic not near genes chrX_5_18770001 chrX_18770001 RAL-373_125b 3818 chrX 18774427 18774431 chrX 18774542 18774565 4 130 12.0 7.5 9.8 0.4 138 chrX 18774427 intergenic CCKLR-17D3 - chrX 18774496 intergenic CCKLR-17D3 - chrX 18774565 intergenic not near genes chrX_4_18770001 chrX_18770001 RAL-373_125b 3819 chrX 18774438 18774468 chrX 18774536 18774603 5 127 6.0 6.0 6.0 0.7 165 chrX 18774438 intergenic CCKLR-17D3 - chrX 18774520 intergenic CCKLR-17D3 - chrX 18774603 intergenic not near genes chrX_5_18770001 chrX_18770001 RAL-373_125b 3820 chrX 18921906 18921943 chrX 18922036 18922051 10 124 4.0 5.0 4.5 1.8 145 chrX 18921906 intergenic not near genes chrX 18921978 intergenic not near genes chrX 18922051 intergenic not near genes chrX_10_18920001 chrX_18920001 RAL-373_125b 3821 chrX 18957041 18957094 chrX 18965752 18965755 roo 11 8706 3.0 3.0 3.0 2.8 8714 chrX 18957041 intron CG43759 + chrX 18961398 intron CG43759 + chrX 18965755 intron CG43759 + chrX_11_18960001 chrX_18960001 RAL-373_125b 3822 chrX 19019890 19019967 chrX 19020078 19020144 6 178 1.0 1.5 1.2 2.7 254 chrX 19019890 intron CG43759 + chrX 19020017 intron CG43759 + chrX 19020144 intron CG43759 + chrX_6_19020001 chrX_19020001 RAL-373_125b 3823 chrX 19036388 19036411 chrX 19036514 19036525 5 122 2.5 0.0 1.2 2.3 137 chrX 19036388 intergenic not near genes chrX 19036456 intergenic not near genes chrX 19036525 intergenic not near genes chrX_5_19035001 chrX_19035001 RAL-373_125b 3824 chrX 19060368 19060434 chrX 19065202 19065268 Doc 11 4832 4.5 2.5 3.5 2.4 4900 chrX 19060368 intron CG14190 + chrX 19062818 intron CG14190 + chrX 19065268 intron CG14190 + chrX_11_19060001 chrX_19060001 RAL-373_125b 3825 chrX 19078285 19078301 chrX 19078350 19078381 5 93 4.5 11.0 7.8 0.6 96 chrX 19078285 exon CG7406 + chrX 19078333 exon CG7406 + chrX 19078381 3` UTR CG7406 + chrX_5_19075001 chrX_19075001 RAL-373_125b 3826 chrX 19080286 19080348 chrX 19080442 19080504 13 155 4.5 6.0 5.2 2.1 218 chrX 19080286 intergenic not near genes chrX 19080395 intergenic not near genes chrX 19080504 intergenic not near genes chrX_13_19080001 chrX_19080001 RAL-373_125b 3827 chrX 19084061 19084103 chrX 19084216 19084273 4 166 4.0 0.0 2.0 1.3 212 chrX 19084061 intergenic CR45503 + chrX 19084167 intergenic CR45503 + chrX 19084273 intergenic CR45503 + chrX_4_19080001 chrX_19080001 RAL-373_125b 3828 chrX 19098708 19098759 chrX 19098849 19098903 8 142 0.0 3.0 1.5 3.2 195 chrX 19098708 intergenic not near genes chrX 19098806 intergenic not near genes chrX 19098903 intergenic not near genes chrX_8_19095001 chrX_19095001 RAL-373_125b 3829 chrX 19125632 19125689 chrX 19125765 19125783 15 126 5.5 3.0 4.2 2.9 151 chrX 19125632 exon tgy - chrX 19125708 intron tgy - chrX 19125783 intron tgy - chrX_15_19125001 chrX_19125001 RAL-373_125b 3830 chrX 19136508 19136553 chrX 19143478 19143523 412 12 6966 9.0 1.5 5.2 1.9 7015 chrX 19136508 intergenic not near genes chrX 19140016 intergenic not near genes chrX 19143523 3` UTR RhoGAP18B - chrX_12_19140001 chrX_19140001 RAL-373_125b 3831 chrX 19162630 19162682 chrX 19162762 19162812 7 130 3.0 5.5 4.2 1.3 182 chrX 19162630 intron RhoGAP18B - chrX 19162721 intron RhoGAP18B - chrX 19162812 intron RhoGAP18B - chrX_7_19160001 chrX_19160001 RAL-373_125b 3832 chrX 19315468 19315527 chrX 19315711 19315771 10 244 3.5 8.5 6.0 1.4 303 chrX 19315468 intron out - chrX 19315620 intron out - chrX 19315771 intron out - chrX_10_19315001 chrX_19315001 RAL-373_125b 3833 chrX 19352465 19352477 chrX 19370521 19370533 6 18056 28.5 12.0 20.2 0.3 18068 chrX 19352465 intergenic not near genes chrX 19361499 intron kek5 + chrX 19370533 intron kek5 + chrX_6_19360001 chrX_19360001 RAL-373_125b 3834 chrX 19356963 19357023 chrX 19358439 19358517 NOF 8 1501 3.5 0.0 1.8 2.9 1554 chrX 19356963 intron kek5 + chrX 19357740 intron kek5 + chrX 19358517 intron kek5 + chrX_8_19355001 chrX_19355001 RAL-373_125b 3835 chrX 19380114 19380179 chrX 19380403 19380470 pogo 10 288 7.0 5.0 6.0 1.4 356 chrX 19380114 intron kek5 + chrX 19380292 intron kek5 + chrX 19380470 intron kek5 + chrX_10_19380001 chrX_19380001 RAL-373_125b 3836 chrX 19457648 19457688 chrX 19457746 19457761 9 108 3.0 3.0 3.0 2.2 113 chrX 19457648 intron kek5 + chrX 19457704 intron kek5 + chrX 19457761 intron kek5 + chrX_9_19455001 chrX_19455001 RAL-373_125b 3837 chrX 19461102 19461175 chrX 19461241 19461321 17 142 3.0 5.0 4.0 3.4 219 chrX 19461102 intron kek5 + chrX 19461212 intron kek5 + chrX 19461321 intron kek5 + chrX_17_19460001 chrX_19460001 RAL-373_125b 3838 chrX 19472087 19472093 chrX 19472707 19472709 jockey 4 619 10.0 5.5 7.8 0.5 622 chrX 19472087 intergenic kek5 + chrX 19472398 intergenic kek5 + chrX 19472709 intergenic not near genes chrX_4_19470001 chrX_19470001 RAL-373_125b 3839 chrX 19472098 19472139 chrX 19472703 19472758 jockey 7 613 4.5 5.5 5.0 1.2 660 chrX 19472098 intergenic kek5 + chrX 19472428 intergenic not near genes chrX 19472758 intergenic not near genes chrX_7_19470001 chrX_19470001 RAL-373_125b 3840 chrX 19591040 19591090 chrX 19591188 19591237 11 146 2.5 2.5 2.5 3.1 197 chrX 19591040 intergenic not near genes chrX 19591138 intergenic not near genes chrX 19591237 intergenic not near genes chrX_11_19590001 chrX_19590001 RAL-373_125b 3841 chrX 19593906 19593932 chrX 19594041 19594067 6 135 10.0 7.5 8.8 0.6 161 chrX 19593906 exon CG14205 + chrX 19593986 exon CG14205 + chrX 19594067 intron CG14205 + chrX_6_19590001 chrX_19590001 RAL-373_125b 3842 chrX 19593933 19593975 chrX 19594036 19594107 12 127 4.0 7.5 5.8 1.8 174 chrX 19593933 exon CG14205 + chrX 19594020 intron CG14205 + chrX 19594107 exon CG14205 + chrX_12_19590001 chrX_19590001 RAL-373_125b 3843 chrX 19599687 19599754 chrX 19599822 19599888 7 134 4.5 4.5 4.5 1.3 201 chrX 19599687 3` UTR RpS10b + chrX 19599788 3` UTR RpS10b + chrX 19599888 3` UTR CG14220 - chrX_7_19595001 chrX_19595001 RAL-373_125b 3844 chrX 19604785 19604850 chrX 19604908 19604966 13 129 4.0 6.0 5.0 2.2 181 chrX 19604785 intergenic CG14207 + chrX 19604876 intergenic CG14207 + chrX 19604966 intergenic CG14207 + chrX_13_19600001 chrX_19600001 RAL-373_125b 3845 chrX 19662019 19662054 chrX 19662272 19662327 12 268 3.5 5.5 4.5 2.2 308 chrX 19662019 intron CG14223 - chrX 19662173 intron CG14223 - chrX 19662327 intron CG14223 - chrX_12_19660001 chrX_19660001 RAL-373_125b 3846 chrX 19710031 19710097 chrX 19711859 19711918 S-element 22 1833 6.0 3.5 4.8 3.8 1887 chrX 19710031 intron meso18E - chrX 19710974 intron meso18E - chrX 19711918 intron meso18E - chrX_22_19710001 chrX_19710001 RAL-373_125b 3847 chrX 19762557 19762571 chrX 19762682 19762701 5 128 9.0 3.0 6.0 0.7 144 chrX 19762557 5` UTR CG12702 - chrX 19762629 5` UTR CG12702 - chrX 19762701 5` UTR CG12702 - chrX_5_19760001 chrX_19760001 RAL-373_125b 3848 chrX 19797330 19797336 chrX 19804671 19804693 Stalker4 4 7346 9.5 5.0 7.2 0.5 7363 chrX 19797330 intergenic not near genes chrX 19801012 intergenic not near genes chrX 19804693 intergenic not near genes chrX_4_19800001 chrX_19800001 RAL-373_125b 3849 chrX 19884094 19884113 chrX 19884200 19884224 6 114 7.0 9.0 8.0 0.7 130 chrX 19884094 intron Hers + chrX 19884159 intron Hers + chrX 19884224 intron Hers + chrX_6_19880001 chrX_19880001 RAL-373_125b 3850 chrX 19897344 19897410 chrX 19897471 19897537 18 125 4.0 2.5 3.2 4.3 193 chrX 19897344 intron Hers + chrX 19897440 intron Hers + chrX 19897537 intron Hers + chrX_18_19895001 chrX_19895001 RAL-373_125b 3851 chrX 19971776 19971826 chrX 19971899 19971953 12 125 6.5 11.5 9.0 1.2 177 chrX 19971776 intergenic not near genes chrX 19971864 intergenic not near genes chrX 19971953 intergenic not near genes chrX_12_19970001 chrX_19970001 RAL-373_125b 3852 chrX 19983857 19983873 chrX 19983982 19983989 5 124 0.0 3.5 1.8 1.8 132 chrX 19983857 intergenic not near genes chrX 19983923 intergenic not near genes chrX 19983989 intergenic not near genes chrX_5_19980001 chrX_19980001 RAL-373_125b 3853 chrX 19992377 19992389 chrX 19992493 19992504 7 116 7.5 7.0 7.2 0.9 127 chrX 19992377 intergenic not near genes chrX 19992440 intergenic not near genes chrX 19992504 intergenic not near genes chrX_7_19990001 chrX_19990001 RAL-373_125b 3854 chrX 19992401 19992429 chrX 19992492 19992495 6 104 7.5 7.5 7.5 0.7 94 chrX 19992401 intergenic not near genes chrX 19992448 intergenic not near genes chrX 19992495 intergenic not near genes chrX_6_19990001 chrX_19990001 RAL-373_125b 3855 chrX 20041486 20041553 chrX 20041616 20041683 18 126 6.5 8.5 7.5 2.1 197 chrX 20041486 intron Dop2R - chrX 20041584 intron Dop2R - chrX 20041683 intron Dop2R - chrX_18_20040001 chrX_20040001 RAL-373_125b 3856 chrX 20090030 20090100 chrX 20090167 20090227 21 134 2.0 5.0 3.5 4.7 197 chrX 20090030 intergenic not near genes chrX 20090128 intergenic not near genes chrX 20090227 intergenic CR45628 + chrX_21_20090001 chrX_20090001 RAL-373_125b 3857 chrX 20124036 20124105 chrX 20124225 20124294 11 185 3.0 1.5 2.2 3.4 258 chrX 20124036 intron CG34331 + chrX 20124165 intron CG34331 + chrX 20124294 intron CG34331 + chrX_11_20120001 chrX_20120001 RAL-373_125b 3858 chrX 20126847 20126914 chrX 20126968 20127023 15 100 2.5 4.5 3.5 3.3 176 chrX 20126847 intergenic not near genes chrX 20126935 intergenic not near genes chrX 20127023 intergenic not near genes chrX_15_20125001 chrX_20125001 RAL-373_125b 3859 chrX 20132269 20132306 chrX 20132387 20132394 7 120 10.0 11.0 10.5 0.6 125 chrX 20132269 intergenic not near genes chrX 20132332 intergenic not near genes chrX 20132394 intergenic not near genes chrX_7_20130001 chrX_20130001 RAL-373_125b 3860 chrX 20133117 20133178 chrX 20133280 20133340 9 159 2.0 3.0 2.5 2.6 223 chrX 20133117 intergenic CG15322 + chrX 20133228 intergenic CG15322 + chrX 20133340 intergenic CG15322 + chrX_9_20130001 chrX_20130001 RAL-373_125b 3861 chrX 20144805 20144857 chrX 20145015 20145076 12 214 4.5 3.0 3.8 2.5 271 chrX 20144805 intergenic not near genes chrX 20144940 intergenic not near genes chrX 20145076 intergenic not near genes chrX_12_20140001 chrX_20140001 RAL-373_125b 3862 chrX 20271466 20271484 chrX 20271608 20271626 5 142 4.5 0.0 2.2 1.6 160 chrX 20271466 intergenic not near genes chrX 20271546 intergenic not near genes chrX 20271626 intergenic not near genes chrX_5_20270001 chrX_20270001 RAL-373_125b 3863 chrX 20312852 20312910 chrX 20312970 20313028 13 124 7.5 3.0 5.2 2.1 176 chrX 20312852 intron CG1504 - chrX 20312940 intron CG1504 - chrX 20313028 intron CG1504 - chrX_13_20310001 chrX_20310001 RAL-373_125b 3864 chrX 20358793 20358855 chrX 20358927 20358984 10 130 6.0 4.0 5.0 1.7 191 chrX 20358793 intergenic not near genes chrX 20358888 intergenic not near genes chrX 20358984 intergenic not near genes chrX_10_20355001 chrX_20355001 RAL-373_125b 3865 chrX 20369269 20369332 chrX 20369403 20369465 19 131 2.0 2.5 2.2 5.9 196 chrX 20369269 intergenic not near genes chrX 20369367 intergenic not near genes chrX 20369465 intergenic not near genes chrX_19_20365001 chrX_20365001 RAL-373_125b 3866 chrX 20374059 20374122 chrX 20374173 20374248 14 118 0.5 6.0 3.2 3.3 189 chrX 20374059 intergenic not near genes chrX 20374154 intergenic not near genes chrX 20374248 intergenic not near genes chrX_14_20370001 chrX_20370001 RAL-373_125b 3867 chrX 20377277 20377340 chrX 20378788 20378851 hobo 5 1513 7.5 6.0 6.8 0.6 1574 chrX 20377277 intergenic not near genes chrX 20378064 intergenic not near genes chrX 20378851 intergenic not near genes chrX_5_20375001 chrX_20375001 RAL-373_125b 3868 chrX 20448389 20448447 chrX 20448523 20448576 11 130 5.0 1.0 3.0 2.8 187 chrX 20448389 intergenic not near genes chrX 20448482 intergenic not near genes chrX 20448576 intergenic not near genes chrX_11_20445001 chrX_20445001 RAL-373_125b 3869 chrX 20452105 20452115 chrX 20452280 20452290 4 175 4.0 6.0 5.0 0.7 185 chrX 20452105 intron CG32506 + chrX 20452198 intron CG32506 + chrX 20452290 intron CG32506 + chrX_4_20450001 chrX_20450001 RAL-373_125b 3870 chrX 20464122 20464175 chrX 20467656 20467704 11 3531 27.0 28.0 27.5 0.4 3582 chrX 20464122 exon CG32506 + chrX 20465913 3` UTR CG32506 + chrX 20467704 5` UTR GstT3 + chrX_11_20465001 chrX_20465001 RAL-373_125b 3871 chrX 20467975 20468003 chrX 20468114 20468132 6 135 3.0 1.5 2.2 1.9 157 chrX 20467975 intron GstT3 + chrX 20468054 intron GstT3 + chrX 20468132 intron GstT3 + chrX_6_20465001 chrX_20465001 RAL-373_125b 3872 chrX 20468010 20468037 chrX 20468109 20468169 4 124 2.0 1.5 1.8 1.4 159 chrX 20468010 intron GstT3 + chrX 20468090 intron GstT3 + chrX 20468169 intron GstT3 + chrX_4_20465001 chrX_20465001 RAL-373_125b 3873 chrX 20483804 20483866 chrX 20483968 20483992 15 161 8.0 5.0 6.5 2.0 188 chrX 20483804 intron RhoGAP19D - chrX 20483898 intron RhoGAP19D - chrX 20483992 intron RhoGAP19D - chrX_15_20480001 chrX_20480001 RAL-373_125b 3874 chrX 20504088 20504150 chrX 20505659 20505716 transib2 20 1568 7.0 6.5 6.8 2.6 1628 chrX 20504088 intron RhoGAP19D - chrX 20504902 intron RhoGAP19D - chrX 20505716 intron RhoGAP19D - chrX_20_20500001 chrX_20500001 RAL-373_125b 3875 chrX 20541326 20541330 chrX 20541489 20541495 4 168 0.0 0.0 0.0 4.0 169 chrX 20541326 intron RunxB + chrX 20541410 intron RunxB + chrX 20541495 intron RunxB + chrX_4_20540001 chrX_20540001 RAL-373_125b 3876 chrX 20575117 20575182 chrX 20575240 20575302 11 124 5.0 2.5 3.8 2.3 185 chrX 20575117 intergenic CG42580 + chrX 20575210 intergenic not near genes chrX 20575302 intergenic not near genes chrX_11_20575001 chrX_20575001 RAL-373_125b 3877 chrX 20634411 20634453 chrX 20634521 20634574 7 125 4.0 6.0 5.0 1.2 163 chrX 20634411 intergenic not near genes chrX 20634492 intergenic not near genes chrX 20634574 intergenic not near genes chrX_7_20630001 chrX_20630001 RAL-373_125b 3878 chrX 20662281 20662343 chrX 20662402 20662464 11 126 3.5 2.0 2.8 2.9 183 chrX 20662281 intron CG1835 + chrX 20662372 intron CG1835 + chrX 20662464 intron CG1835 + chrX_11_20660001 chrX_20660001 RAL-373_125b 3879 chrX 20774541 20774593 chrX 20774664 20774711 8 127 3.5 4.0 3.8 1.7 170 chrX 20774541 intron shakB - chrX 20774626 intron shakB - chrX 20774711 intron shakB - chrX_8_20770001 chrX_20770001 RAL-373_125b 3880 chrX 20810674 20810749 chrX 20810801 20810873 5 127 4.0 5.0 4.5 0.9 199 chrX 20810674 intron shakB - chrX 20810774 intron shakB - chrX 20810873 intron shakB - chrX_5_20810001 chrX_20810001 RAL-373_125b 3881 chrX 20836691 20836715 chrX 20844343 20844367 roo 6 7652 5.0 6.0 5.5 0.9 7676 chrX 20836691 intron shakB - chrX 20840529 intron shakB - chrX 20844367 intron shakB - chrX_6_20840001 chrX_20840001 RAL-373_125b 3882 chrX 20836717 20836751 chrX 20844333 20844403 roo 7 7646 2.0 4.0 3.0 1.8 7686 chrX 20836717 intron shakB - chrX 20840560 intron shakB - chrX 20844403 intron shakB - chrX_7_20840001 chrX_20840001 RAL-373_125b 3883 chrX 20851580 20851646 chrX 20852028 20852090 12 451 3.0 3.0 3.0 3.0 510 chrX 20851580 intron shakB - chrX 20851835 intron shakB - chrX 20852090 intron shakB - chrX_12_20850001 chrX_20850001 RAL-373_125b 3884 chrX 20858570 20858641 chrX 20858696 20858769 15 124 2.5 4.5 3.5 3.3 199 chrX 20858570 intron shakB - chrX 20858670 intron shakB - chrX 20858769 intron shakB - chrX_15_20855001 chrX_20855001 RAL-373_125b 3885 chrX 20911879 20911920 chrX 20912004 20912047 9 124 5.5 7.0 6.2 1.2 168 chrX 20911879 intron shakB - chrX 20911963 intron shakB - chrX 20912047 intron shakB - chrX_9_20910001 chrX_20910001 RAL-373_125b 3886 chrX 20940679 20940739 chrX 20942198 20942233 hobo 9 1514 2.5 3.5 3.0 2.2 1554 chrX 20940679 intergenic not near genes chrX 20941456 intergenic not near genes chrX 20942233 intergenic not near genes chrX_9_20940001 chrX_20940001 RAL-373_125b 3887 chrX 20956922 20957010 chrX 20962416 20962497 I-element 8 5490 0.0 3.0 1.5 3.2 5575 chrX 20956922 intergenic not near genes chrX 20959710 intergenic not near genes chrX 20962497 intergenic Ser6 - chrX_8_20955001 chrX_20955001 RAL-373_125b 3888 chrX 20974178 20974207 chrX 20974393 20974436 7 226 4.5 4.0 4.2 1.3 258 chrX 20974178 intergenic not near genes chrX 20974307 intergenic not near genes chrX 20974436 intergenic not near genes chrX_7_20970001 chrX_20970001 RAL-373_125b 3889 chrX 20980988 20981055 chrX 20981141 20981208 9 153 4.0 2.0 3.0 2.2 220 chrX 20980988 intergenic not near genes chrX 20981098 intergenic not near genes chrX 20981208 intergenic not near genes chrX_9_20980001 chrX_20980001 RAL-373_125b 3890 chrX 21029097 21029180 chrX 21029364 21029381 4 247 2.0 4.0 3.0 1.0 284 chrX 21029097 3` UTR CG1529 - chrX 21029239 3` UTR CG1529 - chrX 21029381 3` UTR CG1529 - chrX_4_21025001 chrX_21025001 RAL-373_125b 3891 chrX 21058137 21058174 chrX 21058284 21058316 6 149 3.0 2.5 2.8 1.6 179 chrX 21058137 intron bves + chrX 21058226 intron bves + chrX 21058316 intron bves + chrX_6_21055001 chrX_21055001 RAL-373_125b 3892 chrX 21061818 21061884 chrX 21062353 21062413 roo 13 533 10.0 4.5 7.2 1.6 595 chrX 21061818 intron bves + chrX 21062116 intron bves + chrX 21062413 intron,3` UTR bves +,CG32512 - chrX_13_21060001 chrX_21060001 RAL-373_125b 3893 chrX 21064973 21065039 chrX 21065465 21065543 15 497 40.5 36.0 38.2 0.4 570 chrX 21064973 intron,intron bves +,CG32512 - chrX 21065258 intron,intron bves +,CG32512 - chrX 21065543 intron,intron bves +,CG32512 - chrX_15_21065001 chrX_21065001 RAL-373_125b 3894 chrX 21076289 21076341 chrX 21076408 21076464 12 125 7.0 0.0 3.5 2.7 175 chrX 21076289 intron bves + chrX 21076376 intron bves + chrX 21076464 intron bves + chrX_12_21075001 chrX_21075001 RAL-373_125b 3895 chrX 21077548 21077598 chrX 21077687 21077737 10 135 7.0 2.5 4.8 1.7 189 chrX 21077548 intron bves + chrX 21077642 intron bves + chrX 21077737 intron bves + chrX_10_21075001 chrX_21075001 RAL-373_125b 3896 chrX 21078729 21078779 chrX 21078857 21078907 10 125 4.5 0.5 2.5 2.9 178 chrX 21078729 intron bves + chrX 21078818 intron bves + chrX 21078907 intron bves + chrX_10_21075001 chrX_21075001 RAL-373_125b 3897 chrX 21086093 21086146 chrX 21087172 21087220 jockey 13 1076 3.5 9.0 6.2 1.8 1127 chrX 21086093 intergenic not near genes chrX 21086656 intergenic not near genes chrX 21087220 intergenic not near genes chrX_13_21085001 chrX_21085001 RAL-373_125b 3898 chrX 21088005 21088059 chrX 21088181 21088231 9 177 6.0 3.5 4.8 1.6 226 chrX 21088005 intergenic not near genes chrX 21088118 intergenic not near genes chrX 21088231 intergenic not near genes chrX_9_21085001 chrX_21085001 RAL-373_125b 3899 chrX 21263157 21263207 chrX 21263301 21263350 12 142 1.5 5.0 3.2 2.9 193 chrX 21263157 intron CG32521 - chrX 21263254 intron CG32521 - chrX 21263350 intron CG32521 - chrX_12_21260001 chrX_21260001 RAL-373_125b 3900 chrX 21311610 21311663 chrX 21311761 21311814 12 151 6.0 0.0 3.0 3.0 204 chrX 21311610 intron CG1801 - chrX 21311712 intron CG1801 - chrX 21311814 intron CG1801 - chrX_12_21310001 chrX_21310001 RAL-373_125b 3901 chrX 21330774 21330841 chrX 21330895 21330967 12 121 3.0 3.5 3.2 2.9 193 chrX 21330774 3` UTR tty - chrX 21330870 3` UTR tty - chrX 21330967 3` UTR tty - chrX_12_21330001 chrX_21330001 RAL-373_125b 3902 chrX 21367509 21367555 chrX 21367613 21367653 9 116 3.0 2.5 2.8 2.4 144 chrX 21367509 intron,intron bbx +,waw + chrX 21367581 intron,intron bbx +,waw + chrX 21367653 intron,intron bbx +,waw + chrX_9_21365001 chrX_21365001 RAL-373_125b 3903 chrX 21410631 21410663 chrX 21410760 21410792 5 127 0.0 7.0 3.5 1.1 161 chrX 21410631 intergenic CR45003 - chrX 21410712 intergenic CR45003 - chrX 21410792 intergenic CR45003 - chrX_5_21410001 chrX_21410001 RAL-373_125b 3904 chrX 21419686 21419730 chrX 21419795 21419869 13 133 4.0 6.0 5.0 2.2 183 chrX 21419686 intergenic not near genes chrX 21419778 intergenic not near genes chrX 21419869 intergenic not near genes chrX_13_21415001 chrX_21415001 RAL-373_125b 3905 chrX 21455208 21455242 chrX 21455397 21455439 7 217 2.5 1.0 1.8 2.5 231 chrX 21455208 intron CG42343 - chrX 21455324 intron CG42343 - chrX 21455439 intron CG42343 - chrX_7_21455001 chrX_21455001 RAL-373_125b 3906 chrX 21458650 21458710 chrX 21464136 21464196 Ivk 18 5484 8.5 10.5 9.5 1.7 5546 chrX 21458650 intergenic not near genes chrX 21461423 intergenic not near genes chrX 21464196 intergenic not near genes chrX_18_21460001 chrX_21460001 RAL-373_125b 3907 chrX 21492228 21492301 chrX 21492391 21492459 23 161 3.5 3.5 3.5 5.1 231 chrX 21492228 intergenic not near genes chrX 21492344 intergenic not near genes chrX 21492459 intergenic not near genes chrX_23_21490001 chrX_21490001 RAL-373_125b 3908 chrX 21565402 21565426 chrX 21565525 21565554 6 121 4.5 11.0 7.8 0.7 152 chrX 21565402 intergenic not near genes chrX 21565478 intergenic not near genes chrX 21565554 intergenic not near genes chrX_6_21565001 chrX_21565001 RAL-373_125b 3909 chrX 21573851 21573879 chrX 21573983 21573987 6 129 6.5 3.0 4.8 1.0 136 chrX 21573851 intergenic not near genes chrX 21573919 intergenic not near genes chrX 21573987 intergenic not near genes chrX_6_21570001 chrX_21570001 RAL-373_125b 3910 chrX 21575498 21575559 chrX 21575627 21575683 17 127 4.0 6.0 5.0 2.8 185 chrX 21575498 intergenic not near genes chrX 21575590 intergenic not near genes chrX 21575683 intergenic not near genes chrX_17_21575001 chrX_21575001 RAL-373_125b 3911 chrX 21581537 21581566 chrX 21581668 21581687 5 129 0.5 0.0 0.2 4.2 150 chrX 21581537 intergenic not near genes chrX 21581612 intergenic not near genes chrX 21581687 intergenic not near genes chrX_5_21580001 chrX_21580001 RAL-373_125b 3912 chrX 21595530 21595558 chrX 21598653 21598681 micropia 4 3123 4.5 10.0 7.2 0.5 3151 chrX 21595530 intergenic not near genes chrX 21597106 intergenic not near genes chrX 21598681 intergenic not near genes chrX_4_21595001 chrX_21595001 RAL-373_125b 3913 chrX 21668213 21668289 chrX 21668345 21668419 15 131 38.0 29.0 33.5 0.4 206 chrX 21668213 intergenic not near genes chrX 21668316 intergenic not near genes chrX 21668419 intergenic not near genes chrX_15_21665001 chrX_21665001 RAL-373_125b 3914 chrX 22522586 22522659 chrX 22525457 22525523 NOF 10 2867 4.0 6.0 5.0 1.7 2937 chrX 22522586 intron CG17600 + chrX 22524054 intron CG17600 + chrX 22525523 intron CG17600 + chrX_10_22520001 chrX_22520001 RAL-373_125b 3915 chrX 22585467 22585527 chrX 22585600 22585651 11 131 3.5 0.0 1.8 3.9 184 chrX 22585467 intron Cda4 - chrX 22585559 intron Cda4 - chrX 22585651 intron Cda4 - chrX_11_22585001 chrX_22585001 RAL-373_125b 3916 chrX 22637490 22637508 chrX 22637618 22637636 5 127 4.0 0.0 2.0 1.7 146 chrX 22637490 intergenic not near genes chrX 22637563 intergenic not near genes chrX 22637636 intergenic not near genes chrX_5_22635001 chrX_22635001 RAL-373_125b 3917 chrX 22660527 22660597 chrX 22660661 22660731 9 129 3.0 2.0 2.5 2.6 204 chrX 22660527 intron CR44997 + chrX 22660629 intron CR44997 + chrX 22660731 intron CR44997 + chrX_9_22660001 chrX_22660001 RAL-373_125b 3918 chrX 22677250 22677325 chrX 22677509 22677583 14 255 3.0 3.5 3.2 3.3 333 chrX 22677250 intron CR44997 + chrX 22677416 intron CR44997 + chrX 22677583 intron CR44997 + chrX_14_22675001 chrX_22675001 RAL-373_125b 3919 chrX 22681439 22681481 chrX 22688938 22688971 HMS-Beagle2 8 7501 3.5 6.0 4.8 1.4 7532 chrX 22681439 intron CR44997 + chrX 22685205 intron CR44997 + chrX 22688971 intron CR44997 + chrX_8_22685001 chrX_22685001 RAL-373_125b 3920 chrX 22694307 22694353 chrX 22694448 22694494 6 139 5.0 6.0 5.5 0.9 187 chrX 22694307 intron CR44997 + chrX 22694400 intron CR44997 + chrX 22694494 intron CR44997 + chrX_6_22690001 chrX_22690001 RAL-373_125b 3921 chrX 22697453 22697514 chrX 22701800 22701861 Juan 16 4345 4.0 8.0 6.0 2.3 4408 chrX 22697453 intron CR44997 + chrX 22699657 intron CR44997 + chrX 22701861 intron CR44997 + chrX_16_22695001 chrX_22695001 RAL-373_125b 3922 chrX 22734411 22734448 chrX 22734540 22734577 6 128 2.5 3.5 3.0 1.5 166 chrX 22734411 intron CR44997 + chrX 22734494 intron CR44997 + chrX 22734577 intron CR44997 + chrX_6_22730001 chrX_22730001 RAL-373_125b 3923 chrX 22771473 22771528 chrX 22774813 22774869 297 9 3335 5.0 4.5 4.8 1.6 3396 chrX 22771473 intron CR44997 + chrX 22773171 intron CR44997 + chrX 22774869 intron CR44997 + chrX_9_22770001 chrX_22770001 RAL-373_125b 3924 chrX 22777697 22777739 chrX 22777812 22777879 6 135 5.0 4.0 4.5 1.1 182 chrX 22777697 intron CR44997 + chrX 22777788 intron CR44997 + chrX 22777879 intron CR44997 + chrX_6_22775001 chrX_22775001 RAL-373_125b 3925 chrX 22798726 22798798 chrX 22798893 22798965 14 162 2.5 6.5 4.5 2.5 239 chrX 22798726 intergenic not near genes chrX 22798846 intergenic not near genes chrX 22798965 intergenic not near genes chrX_14_22795001 chrX_22795001 RAL-373_125b 3926 chrX 22811958 22812004 chrX 22816780 22816826 F-element 12 4820 11.5 10.5 11.0 1.0 4868 chrX 22811958 intergenic CG12446 - chrX 22814392 intergenic not near genes chrX 22816826 intergenic not near genes chrX_12_22810001 chrX_22810001 RAL-373_125b 3927 chrX 22862116 22862136 chrX 22862259 22862287 4 146 11.0 12.5 11.8 0.3 171 chrX 22862116 intron CG42346 + chrX 22862202 intron CG42346 + chrX 22862287 intron CG42346 + chrX_4_22860001 chrX_22860001 RAL-373_125b 3928 chrX 22867955 22868009 chrX 22868093 22868181 10 165 3.0 2.5 2.8 2.6 226 chrX 22867955 exon CG42346 + chrX 22868068 intron CG42346 + chrX 22868181 intron CG42346 + chrX_10_22865001 chrX_22865001 RAL-373_125b 3929 chrX 22872491 22872563 chrX 22872620 22872693 19 128 5.0 6.5 5.8 2.8 202 chrX 22872491 intron CG42346 + chrX 22872592 intron CG42346 + chrX 22872693 intron CG42346 + chrX_19_22870001 chrX_22870001 RAL-373_125b 3930 chrX 22922486 22922541 chrX 22922607 22922671 12 124 1.0 3.0 2.0 4.0 185 chrX 22922486 intergenic not near genes chrX 22922578 intergenic not near genes chrX 22922671 intergenic not near genes chrX_12_22920001 chrX_22920001 RAL-373_125b 3931 chrX 22987099 22987120 chrX 22989795 22989829 Burdock 4 2706 3.0 6.0 4.5 0.7 2730 chrX 22987099 intron,intron stnA -,stnB - chrX 22988464 intron,intron stnA -,stnB - chrX 22989829 intron,intron stnA -,stnB - chrX_4_22985001 chrX_22985001 RAL-373_125b 3932 chrX 22992349 22992424 chrX 22992530 22992595 11 176 1.5 3.0 2.2 3.4 246 chrX 22992349 intron,intron stnA -,stnB - chrX 22992472 intron,intron stnA -,stnB - chrX 22992595 3` UTR,exon stnA -,stnB - chrX_11_22990001 chrX_22990001 RAL-373_125b 3933 chrX 22996274 22996325 chrX 23003556 23003606 roo 10 7280 4.5 6.0 5.2 1.6 7332 chrX 22996274 intron,intron stnA -,stnB - chrX 22999940 intron,intron stnA -,stnB - chrX 23003606 intron,intron stnA -,stnB - chrX_10_22995001 chrX_22995001 RAL-373_125b 3934 chrY 975606 975813 chrY 975748 975970 12 131 154.0 144.5 149.2 0.1 364 chrY 975606 intergenic not near genes chrY 975788 intergenic not near genes chrY 975970 intergenic not near genes chrY_12_975001 chrY_975001 RAL-373_125b 3935 chrY 1445413 1445436 chrY 1447401 1447416 5 1981 15.5 13.0 14.2 0.3 2003 chrY 1445413 intergenic not near genes chrY 1446414 intergenic not near genes chrY 1447416 intergenic not near genes chrY_5_1445001 chrY_1445001 RAL-373_125b 3936 chrY 3666383 3666449 chrY 3666586 3666652 4 202 0.5 1.0 0.8 2.2 269 chrY 3666383 intergenic not near genes chrY 3666518 intergenic not near genes chrY 3666652 intergenic not near genes chrY_4_3665001 chrY_3665001 RAL-373_125b