SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 47451 47474 chr2L 52606 52629 jockey 4 5155 6.5 5.5 6.0 0.6 5178 chr2L 47451 intron Cda5 - chr2L 50040 intron Cda5 - chr2L 52629 intron Cda5 - chr2L_4_50001 chr2L_50001 RAL-371_125b 2 chr2L 73874 73938 chr2L 74305 74369 9 427 3.0 1.5 2.2 2.8 495 chr2L 73874 intron galectin + chr2L 74122 intron galectin + chr2L 74369 intron galectin + chr2L_9_70001 chr2L_70001 RAL-371_125b 3 chr2L 263282 263316 chr2L 263478 263512 6 196 2.5 5.0 3.8 1.2 230 chr2L 263282 intron,3` UTR CG3645 -,CG17075 - chr2L 263397 intron,3` UTR CG3645 -,CG17075 - chr2L 263512 intron,3` UTR CG3645 -,CG17075 - chr2L_6_260001 chr2L_260001 RAL-371_125b 4 chr2L 325097 325137 chr2L 325223 325257 11 125 3.5 7.5 5.5 1.7 160 chr2L 325097 intron Plc21C + chr2L 325177 intron Plc21C + chr2L 325257 intron Plc21C + chr2L_11_325001 chr2L_325001 RAL-371_125b 5 chr2L 347845 347910 chr2L 355395 355460 blood 10 7550 2.5 4.5 3.5 2.2 7615 chr2L 347845 3` UTR Plc21C + chr2L 351652 intron Plc21C + chr2L 355460 3` UTR Plc21C + chr2L_10_350001 chr2L_350001 RAL-371_125b 6 chr2L 467328 467353 chr2L 467477 467502 6 149 6.5 6.5 6.5 0.8 174 chr2L 467328 intron CG4297 - chr2L 467415 intron CG4297 - chr2L 467502 intron CG4297 - chr2L_6_465001 chr2L_465001 RAL-371_125b 7 chr2L 590284 590333 chr2L 590426 590475 11 142 3.0 2.0 2.5 3.1 191 chr2L 590284 intron Gsc - chr2L 590380 intron Gsc - chr2L 590475 intron Gsc - chr2L_11_590001 chr2L_590001 RAL-371_125b 8 chr2L 686912 686941 chr2L 696002 696031 roo 4 9090 5.5 5.0 5.2 0.6 9119 chr2L 686912 intron ds - chr2L 691472 intron ds - chr2L 696031 intron ds - chr2L_4_690001 chr2L_690001 RAL-371_125b 9 chr2L 702456 702516 chr2L 702617 702677 16 161 3.0 3.0 3.0 4.0 221 chr2L 702456 intron ds - chr2L 702566 intron ds - chr2L 702677 intron ds - chr2L_16_700001 chr2L_700001 RAL-371_125b 10 chr2L 721177 721185 chr2L 721444 721452 4 267 5.5 2.0 3.8 0.8 275 chr2L 721177 intergenic not near genes chr2L 721314 intergenic not near genes chr2L 721452 intergenic not near genes chr2L_4_720001 chr2L_720001 RAL-371_125b 11 chr2L 770443 770493 chr2L 772255 772291 Bari1 14 1821 3.5 7.0 5.2 2.3 1848 chr2L 770443 intergenic not near genes chr2L 771367 intergenic not near genes chr2L 772291 intergenic CR44614 + chr2L_14_770001 chr2L_770001 RAL-371_125b 12 chr2L 844897 844966 chr2L 845034 845071 11 128 4.0 3.5 3.8 2.3 174 chr2L 844897 intron drongo - chr2L 844984 intron drongo - chr2L 845071 intron drongo - chr2L_11_840001 chr2L_840001 RAL-371_125b 13 chr2L 877802 877863 chr2L 877933 877979 6 127 5.5 4.5 5.0 1.0 177 chr2L 877802 3` UTR,exon CG15824 -,ninaA + chr2L 877890 3` UTR,intron CG15824 -,ninaA + chr2L 877979 3` UTR,exon CG15824 -,ninaA + chr2L_6_875001 chr2L_875001 RAL-371_125b 14 chr2L 976830 976844 chr2L 984516 984530 roo 6 7686 6.0 0.0 3.0 1.5 7700 chr2L 976830 intergenic not near genes chr2L 980680 intergenic not near genes chr2L 984530 intergenic not near genes chr2L_6_980001 chr2L_980001 RAL-371_125b 15 chr2L 996676 996719 chr2L 1005821 1005864 roo 6 9145 0.5 2.0 1.2 2.7 9188 chr2L 996676 intergenic not near genes chr2L 1001270 intergenic not near genes chr2L 1005864 intergenic not near genes chr2L_6_1000001 chr2L_1000001 RAL-371_125b 16 chr2L 1025071 1025107 chr2L 1025200 1025237 8 129 5.5 4.5 5.0 1.3 166 chr2L 1025071 intron IA-2 - chr2L 1025154 intron IA-2 - chr2L 1025237 intron IA-2 - chr2L_8_1025001 chr2L_1025001 RAL-371_125b 17 chr2L 1041344 1041376 chr2L 1041450 1041514 10 135 0.0 2.0 1.0 5.0 170 chr2L 1041344 intron IA-2 - chr2L 1041429 intron IA-2 - chr2L 1041514 intron IA-2 - chr2L_10_1040001 chr2L_1040001 RAL-371_125b 18 chr2L 1057445 1057483 chr2L 1057578 1057616 5 124 0.0 3.5 1.8 1.8 171 chr2L 1057445 intron S - chr2L 1057530 intron S - chr2L 1057616 intron S - chr2L_5_1055001 chr2L_1055001 RAL-371_125b 19 chr2L 1126624 1126700 chr2L 1126750 1126822 24 124 5.0 3.5 4.2 4.6 198 chr2L 1126624 intron Pino - chr2L 1126723 intron Pino - chr2L 1126822 intron Pino - chr2L_24_1125001 chr2L_1125001 RAL-371_125b 20 chr2L 1220090 1220148 chr2L 1227605 1227664 blood 12 7516 7.0 1.5 4.2 2.3 7574 chr2L 1220090 intron CG42329 + chr2L 1223877 intron CG42329 + chr2L 1227664 intron CG42329 + chr2L_12_1220001 chr2L_1220001 RAL-371_125b 21 chr2L 1237943 1237995 chr2L 1238077 1238129 7 134 6.0 2.5 4.2 1.3 186 chr2L 1237943 intergenic not near genes chr2L 1238036 intergenic not near genes chr2L 1238129 intergenic not near genes chr2L_7_1235001 chr2L_1235001 RAL-371_125b 22 chr2L 1237996 1238004 chr2L 1238075 1238126 4 117 5.0 2.0 3.5 0.9 130 chr2L 1237996 intergenic not near genes chr2L 1238061 intergenic not near genes chr2L 1238126 intergenic not near genes chr2L_4_1235001 chr2L_1235001 RAL-371_125b 23 chr2L 1261227 1261256 chr2L 1261347 1261386 7 129 0.5 4.5 2.5 2.0 159 chr2L 1261227 intron robo3 + chr2L 1261306 intron robo3 + chr2L 1261386 intron robo3 + chr2L_7_1260001 chr2L_1260001 RAL-371_125b 24 chr2L 1321978 1322040 chr2L 1322117 1322179 11 139 4.5 3.0 3.8 2.3 201 chr2L 1321978 intergenic not near genes chr2L 1322078 intergenic not near genes chr2L 1322179 intergenic not near genes chr2L_11_1320001 chr2L_1320001 RAL-371_125b 25 chr2L 1464112 1464171 chr2L 1464394 1464432 13 279 2.5 5.0 3.8 2.7 320 chr2L 1464112 intergenic not near genes chr2L 1464272 intergenic not near genes chr2L 1464432 intergenic not near genes chr2L_13_1460001 chr2L_1460001 RAL-371_125b 26 chr2L 1503384 1503452 chr2L 1503512 1503580 18 127 5.5 5.0 5.2 2.9 196 chr2L 1503384 intron CR44064 + chr2L 1503482 intron CR44064 + chr2L 1503580 5` UTR CR44064 + chr2L_18_1500001 chr2L_1500001 RAL-371_125b 27 chr2L 1529063 1529077 chr2L 1529204 1529218 4 141 4.0 5.0 4.5 0.7 155 chr2L 1529063 intergenic not near genes chr2L 1529140 intergenic not near genes chr2L 1529218 intergenic not near genes chr2L_4_1525001 chr2L_1525001 RAL-371_125b 28 chr2L 1570654 1570712 chr2L 1573576 1573634 F-element 14 2922 2.5 1.5 2.0 4.7 2980 chr2L 1570654 intron haf + chr2L 1572144 intron haf + chr2L 1573634 intron haf + chr2L_14_1570001 chr2L_1570001 RAL-371_125b 29 chr2L 1609989 1610012 chr2L 1610598 1610673 7 653 2.0 3.5 2.8 1.8 684 chr2L 1609989 exon CG31935 - chr2L 1610331 exon CG31935 - chr2L 1610673 exon CG31935 - chr2L_7_1610001 chr2L_1610001 RAL-371_125b 30 chr2L 1634718 1634757 chr2L 1634851 1634890 5 132 5.0 5.0 5.0 0.8 172 chr2L 1634718 intergenic not near genes chr2L 1634804 intergenic not near genes chr2L 1634890 intergenic not near genes chr2L_5_1630001 chr2L_1630001 RAL-371_125b 31 chr2L 1635351 1635425 chr2L 1635531 1635611 9 185 0.0 3.0 1.5 3.6 260 chr2L 1635351 intergenic not near genes chr2L 1635481 intergenic not near genes chr2L 1635611 intergenic not near genes chr2L_9_1635001 chr2L_1635001 RAL-371_125b 32 chr2L 1644071 1644136 chr2L 1644344 1644409 5 273 2.5 4.5 3.5 1.1 338 chr2L 1644071 intergenic not near genes chr2L 1644240 intergenic not near genes chr2L 1644409 intergenic not near genes chr2L_5_1640001 chr2L_1640001 RAL-371_125b 33 chr2L 1678935 1678997 chr2L 1686450 1686512 blood 6 7515 3.0 5.5 4.2 1.2 7577 chr2L 1678935 intron chinmo + chr2L 1682724 intron chinmo + chr2L 1686512 intron chinmo + chr2L_6_1680001 chr2L_1680001 RAL-371_125b 34 chr2L 1693038 1693099 chr2L 1693160 1693201 14 126 6.5 2.5 4.5 2.5 163 chr2L 1693038 intron chinmo + chr2L 1693120 intron chinmo + chr2L 1693201 intron chinmo + chr2L_14_1690001 chr2L_1690001 RAL-371_125b 35 chr2L 1711320 1711334 chr2L 1711694 1711708 mdg3 5 373 8.5 4.0 6.2 0.7 388 chr2L 1711320 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711514 3` UTR frtz - chr2L 1711708 3` UTR frtz - chr2L_5_1710001 chr2L_1710001 RAL-371_125b 36 chr2L 1711344 1711378 chr2L 1711687 1711731 mdg3 6 356 5.5 2.5 4.0 1.2 387 chr2L 1711344 3` UTR,3` UTR mRpL48 +,frtz - chr2L 1711538 3` UTR frtz - chr2L 1711731 3` UTR frtz - chr2L_6_1710001 chr2L_1710001 RAL-371_125b 37 chr2L 1724769 1724825 chr2L 1724901 1724957 13 129 3.0 7.5 5.2 2.1 188 chr2L 1724769 3` UTR Eno - chr2L 1724863 3` UTR Eno - chr2L 1724957 3` UTR Eno - chr2L_13_1720001 chr2L_1720001 RAL-371_125b 38 chr2L 1744768 1744833 chr2L 1744893 1744916 17 115 4.5 6.5 5.5 2.6 148 chr2L 1744768 intron CG17646 + chr2L 1744842 intron CG17646 + chr2L 1744916 intron CG17646 + chr2L_17_1740001 chr2L_1740001 RAL-371_125b 39 chr2L 1785631 1785702 chr2L 1785772 1785843 18 136 5.0 8.0 6.5 2.4 212 chr2L 1785631 intergenic Gr22e + chr2L 1785737 intergenic Gr22e + chr2L 1785843 intergenic not near genes chr2L_18_1785001 chr2L_1785001 RAL-371_125b 40 chr2L 1883309 1883321 chr2L 1883435 1883447 6 126 1.5 0.0 0.8 3.3 138 chr2L 1883309 intron CG15358 - chr2L 1883378 intron CG15358 - chr2L 1883447 intron CG15358 - chr2L_6_1880001 chr2L_1880001 RAL-371_125b 41 chr2L 1883400 1883445 chr2L 1884006 1884075 7 620 0.0 1.5 0.8 3.9 675 chr2L 1883400 intron CG15358 - chr2L 1883738 exon CG15358 - chr2L 1884075 intergenic CG15358 - chr2L_7_1880001 chr2L_1880001 RAL-371_125b 42 chr2L 1999510 1999577 chr2L 1999723 1999780 4 211 4.0 3.5 3.8 0.8 270 chr2L 1999510 intron CG33543 - chr2L 1999645 intron CG33543 - chr2L 1999780 intron CG33543 - chr2L_4_1995001 chr2L_1995001 RAL-371_125b 43 chr2L 2068772 2068822 chr2L 2069006 2069056 8 234 3.0 5.5 4.2 1.5 284 chr2L 2068772 intron dpr3 - chr2L 2068914 intron dpr3 - chr2L 2069056 intron dpr3 - chr2L_8_2065001 chr2L_2065001 RAL-371_125b 44 chr2L 2084360 2084429 chr2L 2085357 2085406 11 993 2.0 1.0 1.5 4.4 1046 chr2L 2084360 intron,5` UTR dpr3 -,CR44055 + chr2L 2084883 intron dpr3 - chr2L 2085406 intron dpr3 - chr2L_11_2080001 chr2L_2080001 RAL-371_125b 45 chr2L 2112077 2112138 chr2L 2119779 2119850 opus 5 7702 1.0 4.5 2.8 1.3 7773 chr2L 2112077 intergenic not near genes chr2L 2115964 intergenic not near genes chr2L 2119850 intergenic not near genes chr2L_5_2115001 chr2L_2115001 RAL-371_125b 46 chr2L 2125523 2125567 chr2L 2125815 2125865 13 293 10.5 32.0 21.2 0.6 342 chr2L 2125523 intergenic not near genes chr2L 2125694 intergenic not near genes chr2L 2125865 intergenic not near genes chr2L_13_2125001 chr2L_2125001 RAL-371_125b 47 chr2L 2250370 2250404 chr2L 2251187 2251221 5 817 7.5 0.0 3.8 1.0 851 chr2L 2250370 intergenic Ser12 - chr2L 2250796 exon Ser12 - chr2L 2251221 exon Ser12 - chr2L_5_2250001 chr2L_2250001 RAL-371_125b 48 chr2L 2294032 2294073 chr2L 2299251 2299281 copia 4 5220 2.0 4.0 3.0 1.0 5249 chr2L 2294032 intergenic not near genes chr2L 2296656 intergenic not near genes chr2L 2299281 intergenic not near genes chr2L_4_2295001 chr2L_2295001 RAL-371_125b 49 chr2L 2317076 2317099 chr2L 2317297 2317320 5 221 16.5 14.0 15.2 0.3 244 chr2L 2317076 intron,intron CG9967 -,eys + chr2L 2317198 intron,intron CG9967 -,eys + chr2L 2317320 intron,intron CG9967 -,eys + chr2L_5_2315001 chr2L_2315001 RAL-371_125b 50 chr2L 2319438 2319470 chr2L 2319569 2319617 4 136 1.5 8.5 5.0 0.7 179 chr2L 2319438 intron,intron CG9967 -,eys + chr2L 2319528 intron,intron CG9967 -,eys + chr2L 2319617 intron,intron CG9967 -,eys + chr2L_4_2315001 chr2L_2315001 RAL-371_125b 51 chr2L 2361852 2361898 chr2L 2361982 2362028 6 130 4.0 3.5 3.8 1.2 176 chr2L 2361852 intron Rab5 - chr2L 2361940 intron Rab5 - chr2L 2362028 intron Rab5 - chr2L_6_2360001 chr2L_2360001 RAL-371_125b 52 chr2L 2372322 2372368 chr2L 2372458 2372504 11 133 3.0 2.5 2.8 2.9 182 chr2L 2372322 intergenic CG3609 - chr2L 2372413 intergenic CG3609 - chr2L 2372504 3` UTR CG3609 - chr2L_11_2370001 chr2L_2370001 RAL-371_125b 53 chr2L 2373790 2373841 chr2L 2374360 2374381 9 567 3.5 2.5 3.0 2.2 591 chr2L 2373790 intron CG3609 - chr2L 2374086 intron CG3609 - chr2L 2374381 intron CG3609 - chr2L_9_2370001 chr2L_2370001 RAL-371_125b 54 chr2L 2392111 2392165 chr2L 2392271 2392309 4 156 4.5 4.0 4.2 0.8 198 chr2L 2392111 5` UTR VGlut + chr2L 2392210 intron VGlut + chr2L 2392309 intron VGlut + chr2L_4_2390001 chr2L_2390001 RAL-371_125b 55 chr2L 2396271 2396284 chr2L 2396399 2396412 5 128 0.5 1.0 0.8 2.8 141 chr2L 2396271 intron VGlut + chr2L 2396342 intron VGlut + chr2L 2396412 intron VGlut + chr2L_5_2395001 chr2L_2395001 RAL-371_125b 56 chr2L 2427332 2427386 chr2L 2427463 2427522 7 128 4.5 3.5 4.0 1.4 190 chr2L 2427332 3` UTR CR44912 - chr2L 2427427 3` UTR CR44912 - chr2L 2427522 3` UTR CR44912 - chr2L_7_2425001 chr2L_2425001 RAL-371_125b 57 chr2L 2503424 2503471 chr2L 2503628 2503674 14 199 6.5 3.0 4.8 2.4 250 chr2L 2503424 intergenic not near genes chr2L 2503549 intergenic not near genes chr2L 2503674 intergenic not near genes chr2L_14_2500001 chr2L_2500001 RAL-371_125b 58 chr2L 2504177 2504222 chr2L 2504305 2504350 11 128 2.0 3.0 2.5 3.1 173 chr2L 2504177 intergenic not near genes chr2L 2504264 intergenic not near genes chr2L 2504350 intergenic not near genes chr2L_11_2500001 chr2L_2500001 RAL-371_125b 59 chr2L 2557810 2557844 chr2L 2557945 2557979 12 135 0.0 6.0 3.0 3.0 169 chr2L 2557810 intergenic not near genes chr2L 2557894 intergenic not near genes chr2L 2557979 intergenic not near genes chr2L_12_2555001 chr2L_2555001 RAL-371_125b 60 chr2L 2565509 2565554 chr2L 2571632 2571677 297 10 6121 3.0 3.5 3.2 2.4 6168 chr2L 2565509 exon Cyp309a2 - chr2L 2568593 intron Cyp309a2 - chr2L 2571677 exon Cyp309a2 - chr2L_10_2565001 chr2L_2565001 RAL-371_125b 61 chr2L 2587770 2587834 chr2L 2587899 2587922 7 123 4.5 2.0 3.2 1.7 152 chr2L 2587770 intergenic not near genes chr2L 2587846 intergenic not near genes chr2L 2587922 intergenic not near genes chr2L_7_2585001 chr2L_2585001 RAL-371_125b 62 chr2L 2634486 2634547 chr2L 2634636 2634697 12 150 4.5 2.0 3.2 2.9 211 chr2L 2634486 intergenic not near genes chr2L 2634592 intergenic not near genes chr2L 2634697 intergenic not near genes chr2L_12_2630001 chr2L_2630001 RAL-371_125b 63 chr2L 2661214 2661220 chr2L 2663050 2663108 I-element 5 1852 2.5 4.5 3.5 1.1 1894 chr2L 2661214 intergenic not near genes chr2L 2662161 intergenic not near genes chr2L 2663108 intergenic not near genes chr2L_5_2660001 chr2L_2660001 RAL-371_125b 64 chr2L 2661222 2661228 chr2L 2663049 2663100 I-element 4 1861 0.5 4.0 2.2 1.2 1878 chr2L 2661222 intergenic not near genes chr2L 2662161 intergenic not near genes chr2L 2663100 intergenic not near genes chr2L_4_2660001 chr2L_2660001 RAL-371_125b 65 chr2L 2667583 2667649 chr2L 2667712 2667723 12 121 2.0 3.5 2.8 3.2 140 chr2L 2667583 intergenic not near genes chr2L 2667653 intergenic not near genes chr2L 2667723 intergenic not near genes chr2L_12_2665001 chr2L_2665001 RAL-371_125b 66 chr2L 2698846 2698894 chr2L 2698978 2699026 7 135 0.0 8.5 4.2 1.3 180 chr2L 2698846 intron CG31690 + chr2L 2698936 intron CG31690 + chr2L 2699026 intron CG31690 + chr2L_7_2695001 chr2L_2695001 RAL-371_125b 67 chr2L 2709096 2709160 chr2L 2709224 2709288 19 126 1.5 4.5 3.0 4.8 192 chr2L 2709096 intron CG31690 + chr2L 2709192 intron CG31690 + chr2L 2709288 intron CG31690 + chr2L_19_2705001 chr2L_2705001 RAL-371_125b 68 chr2L 2724361 2724414 chr2L 2724486 2724540 10 125 3.0 3.5 3.2 2.4 179 chr2L 2724361 intergenic not near genes chr2L 2724450 intergenic not near genes chr2L 2724540 intergenic not near genes chr2L_10_2720001 chr2L_2720001 RAL-371_125b 69 chr2L 2734497 2734532 chr2L 2734625 2734660 10 126 1.5 6.5 4.0 2.0 163 chr2L 2734497 intron CG31689 + chr2L 2734578 intron CG31689 + chr2L 2734660 intron CG31689 + chr2L_10_2730001 chr2L_2730001 RAL-371_125b 70 chr2L 2772578 2772616 chr2L 2779214 2779252 297 8 6636 7.5 5.0 6.2 1.1 6674 chr2L 2772578 3` UTR Syt1 - chr2L 2775915 intron Syt1 - chr2L 2779252 3` UTR Syt1 - chr2L_8_2775001 chr2L_2775001 RAL-371_125b 71 chr2L 2786072 2786128 chr2L 2786209 2786265 5 135 3.5 3.0 3.2 1.2 193 chr2L 2786072 intron Syt1 - chr2L 2786168 intron Syt1 - chr2L 2786265 intron Syt1 - chr2L_5_2785001 chr2L_2785001 RAL-371_125b 72 chr2L 2800570 2800583 chr2L 2800703 2800716 4 133 3.0 0.0 1.5 1.6 146 chr2L 2800570 intergenic not near genes chr2L 2800643 intergenic not near genes chr2L 2800716 intergenic not near genes chr2L_4_2800001 chr2L_2800001 RAL-371_125b 73 chr2L 2826498 2826574 chr2L 2826636 2826709 8 138 0.0 3.0 1.5 3.2 211 chr2L 2826498 intron Duox - chr2L 2826604 intron Duox - chr2L 2826709 intron Duox - chr2L_8_2825001 chr2L_2825001 RAL-371_125b 74 chr2L 2873431 2873467 chr2L 2873557 2873595 4 128 0.0 7.0 3.5 0.9 164 chr2L 2873431 intron CG31694 - chr2L 2873513 intron CG31694 - chr2L 2873595 intron CG31694 - chr2L_4_2870001 chr2L_2870001 RAL-371_125b 75 chr2L 2885330 2885393 chr2L 2885457 2885520 12 127 1.0 3.5 2.2 3.8 190 chr2L 2885330 intron NTPase - chr2L 2885425 intron NTPase - chr2L 2885520 intron NTPase - chr2L_12_2885001 chr2L_2885001 RAL-371_125b 76 chr2L 2887244 2887305 chr2L 2887410 2887471 20 164 4.0 4.0 4.0 4.0 227 chr2L 2887244 intron lilli + chr2L 2887358 intron lilli + chr2L 2887471 intron lilli + chr2L_20_2885001 chr2L_2885001 RAL-371_125b 77 chr2L 2932405 2932471 chr2L 2932912 2932978 11 507 6.5 5.0 5.8 1.6 573 chr2L 2932405 intron lilli + chr2L 2932692 intron lilli + chr2L 2932978 intron lilli + chr2L_11_2930001 chr2L_2930001 RAL-371_125b 78 chr2L 2937370 2937448 chr2L 2937498 2937514 12 123 3.0 0.5 1.8 4.3 144 chr2L 2937370 intron lilli + chr2L 2937442 intron lilli + chr2L 2937514 intron lilli + chr2L_12_2935001 chr2L_2935001 RAL-371_125b 79 chr2L 3072781 3072848 chr2L 3072918 3072985 10 135 2.0 7.0 4.5 1.8 204 chr2L 3072781 intron toc - chr2L 3072883 intron toc - chr2L 3072985 intron toc - chr2L_10_3070001 chr2L_3070001 RAL-371_125b 80 chr2L 3073007 3073037 chr2L 3078260 3078290 copia 9 5253 7.0 5.5 6.2 1.2 5283 chr2L 3073007 intron toc - chr2L 3075648 intron toc - chr2L 3078290 intron toc - chr2L_9_3075001 chr2L_3075001 RAL-371_125b 81 chr2L 3103665 3103754 chr2L 3103798 3103850 9 126 3.0 5.0 4.0 1.8 185 chr2L 3103665 intron toc - chr2L 3103758 intron toc - chr2L 3103850 intron toc - chr2L_9_3100001 chr2L_3100001 RAL-371_125b 82 chr2L 3108820 3108894 chr2L 3108947 3109021 22 126 5.5 2.0 3.8 4.6 201 chr2L 3108820 exon toc - chr2L 3108920 intron toc - chr2L 3109021 intron toc - chr2L_22_3105001 chr2L_3105001 RAL-371_125b 83 chr2L 3134249 3134284 chr2L 3134375 3134410 9 126 3.0 8.0 5.5 1.4 161 chr2L 3134249 intron toc - chr2L 3134330 intron toc - chr2L 3134410 intron toc - chr2L_9_3130001 chr2L_3130001 RAL-371_125b 84 chr2L 3134906 3134953 chr2L 3135033 3135080 13 127 4.0 7.5 5.8 1.9 174 chr2L 3134906 intron toc - chr2L 3134993 intron toc - chr2L 3135080 intron toc - chr2L_13_3130001 chr2L_3130001 RAL-371_125b 85 chr2L 3156510 3156564 chr2L 3156657 3156711 6 142 0.0 2.5 1.2 2.7 201 chr2L 3156510 intron Mad - chr2L 3156610 intron Mad - chr2L 3156711 intron Mad - chr2L_6_3155001 chr2L_3155001 RAL-371_125b 86 chr2L 3186424 3186491 chr2L 3186560 3186627 8 136 2.5 3.5 3.0 2.0 203 chr2L 3186424 intron CG34393 - chr2L 3186526 intron CG34393 - chr2L 3186627 intron CG34393 - chr2L_8_3185001 chr2L_3185001 RAL-371_125b 87 chr2L 3192172 3192235 chr2L 3192333 3192396 12 161 3.5 4.5 4.0 2.4 224 chr2L 3192172 exon CG34393 - chr2L 3192284 intron CG34393 - chr2L 3192396 intron CG34393 - chr2L_12_3190001 chr2L_3190001 RAL-371_125b 88 chr2L 3251469 3251510 chr2L 3259084 3259109 springer 5 7612 1.5 4.0 2.8 1.3 7640 chr2L 3251469 intergenic not near genes chr2L 3255289 intergenic not near genes chr2L 3259109 intergenic not near genes chr2L_5_3255001 chr2L_3255001 RAL-371_125b 89 chr2L 3272938 3272955 chr2L 3273072 3273089 5 134 0.0 4.0 2.0 1.7 151 chr2L 3272938 intergenic not near genes chr2L 3273014 intergenic not near genes chr2L 3273089 intergenic not near genes chr2L_5_3270001 chr2L_3270001 RAL-371_125b 90 chr2L 3291211 3291266 chr2L 3291340 3291396 11 129 2.0 5.5 3.8 2.3 185 chr2L 3291211 intergenic CG9664 - chr2L 3291304 3` UTR CG9664 - chr2L 3291396 3` UTR CG9664 - chr2L_11_3290001 chr2L_3290001 RAL-371_125b 91 chr2L 3293910 3293960 chr2L 3294020 3294079 10 124 2.5 4.0 3.2 2.4 169 chr2L 3293910 5` UTR CG9664 - chr2L 3293994 intron CG9664 - chr2L 3294079 intron CG9664 - chr2L_10_3290001 chr2L_3290001 RAL-371_125b 92 chr2L 3314648 3314722 chr2L 3314775 3314849 16 126 4.5 5.0 4.8 2.8 201 chr2L 3314648 intron CG3277 + chr2L 3314748 intron CG3277 + chr2L 3314849 intron CG3277 + chr2L_16_3310001 chr2L_3310001 RAL-371_125b 93 chr2L 3388566 3388621 chr2L 3388857 3388912 pogo 6 291 4.0 5.0 4.5 1.1 346 chr2L 3388566 intergenic CG42460 - chr2L 3388739 intergenic CG42460 - chr2L 3388912 intergenic CG42460 -,CR44791 + chr2L_6_3385001 chr2L_3385001 RAL-371_125b 94 chr2L 3396553 3396621 chr2L 3396795 3396868 15 243 1.5 5.0 3.2 3.6 315 chr2L 3396553 intergenic not near genes chr2L 3396710 intergenic not near genes chr2L 3396868 intergenic CR44792 - chr2L_15_3395001 chr2L_3395001 RAL-371_125b 95 chr2L 3431333 3431351 chr2L 3431459 3431477 8 126 1.5 4.0 2.8 2.1 144 chr2L 3431333 intergenic not near genes chr2L 3431405 intergenic not near genes chr2L 3431477 intergenic not near genes chr2L_8_3430001 chr2L_3430001 RAL-371_125b 96 chr2L 3508308 3508368 chr2L 3508436 3508496 10 128 2.5 2.5 2.5 2.9 188 chr2L 3508308 intergenic tim -,CR45299 + chr2L 3508402 intergenic CR45299 +,tim - chr2L 3508496 intergenic CR45299 +,tim - chr2L_10_3505001 chr2L_3505001 RAL-371_125b 97 chr2L 3561199 3561212 chr2L 3561332 3561345 4 133 7.5 7.5 7.5 0.5 146 chr2L 3561199 intergenic not near genes chr2L 3561272 intergenic not near genes chr2L 3561345 intergenic not near genes chr2L_4_3560001 chr2L_3560001 RAL-371_125b 98 chr2L 3561215 3561267 chr2L 3561329 3561400 13 129 5.0 7.5 6.2 1.8 185 chr2L 3561215 intergenic not near genes chr2L 3561308 intergenic not near genes chr2L 3561400 intergenic not near genes chr2L_13_3560001 chr2L_3560001 RAL-371_125b 99 chr2L 3584628 3584690 chr2L 3584752 3584817 13 126 3.0 4.0 3.5 2.9 189 chr2L 3584628 intergenic not near genes chr2L 3584722 intergenic not near genes chr2L 3584817 intergenic not near genes chr2L_13_3580001 chr2L_3580001 RAL-371_125b 100 chr2L 3632245 3632271 chr2L 3632372 3632398 6 127 0.0 0.0 0.0 6.0 153 chr2L 3632245 intron for - chr2L 3632322 intron for - chr2L 3632398 intron for - chr2L_6_3630001 chr2L_3630001 RAL-371_125b 101 chr2L 3643419 3643439 chr2L 3643546 3643566 4 127 10.5 4.5 7.5 0.5 147 chr2L 3643419 intron for - chr2L 3643492 intron for - chr2L 3643566 intron for - chr2L_4_3640001 chr2L_3640001 RAL-371_125b 102 chr2L 3649750 3649803 chr2L 3655002 3655055 copia 12 5252 0.0 1.5 0.8 6.7 5305 chr2L 3649750 intron for - chr2L 3652402 intron for - chr2L 3655055 intron for - chr2L_12_3650001 chr2L_3650001 RAL-371_125b 103 chr2L 3685984 3686051 chr2L 3686122 3686189 11 138 5.5 1.0 3.2 2.6 205 chr2L 3685984 intron CG34340 + chr2L 3686086 intron CG34340 + chr2L 3686189 intron CG34340 + chr2L_11_3685001 chr2L_3685001 RAL-371_125b 104 chr2L 3688290 3688302 chr2L 3688423 3688435 6 133 2.0 0.0 1.0 3.0 145 chr2L 3688290 intron CG34340 + chr2L 3688362 intron CG34340 + chr2L 3688435 intron CG34340 + chr2L_6_3685001 chr2L_3685001 RAL-371_125b 105 chr2L 3784766 3784821 chr2L 3785675 3785730 6 909 11.0 12.5 11.8 0.5 964 chr2L 3784766 intergenic CG31960 + chr2L 3785248 exon CG31960 + chr2L 3785730 intergenic CG31958 +,CG31960 + chr2L_6_3785001 chr2L_3785001 RAL-371_125b 106 chr2L 3784698 3784744 chr2L 3785591 3785630 7 893 6.5 16.0 11.2 0.6 932 chr2L 3784698 intergenic CG31960 + chr2L 3785164 exon CG31960 + chr2L 3785630 intergenic CG31960 +,CG31958 + chr2L_7_3785001 chr2L_3785001 RAL-371_125b 107 chr2L 3831793 3831854 chr2L 3831924 3831985 14 131 1.5 2.5 2.0 4.7 192 chr2L 3831793 intergenic not near genes chr2L 3831889 intergenic not near genes chr2L 3831985 intergenic not near genes chr2L_14_3830001 chr2L_3830001 RAL-371_125b 108 chr2L 3898218 3898271 chr2L 3898353 3898406 10 133 2.5 3.0 2.8 2.6 188 chr2L 3898218 intron capu - chr2L 3898312 intron capu - chr2L 3898406 intron capu - chr2L_10_3895001 chr2L_3895001 RAL-371_125b 109 chr2L 3936643 3936650 chr2L 3936741 3936780 4 122 1.5 3.0 2.2 1.2 137 chr2L 3936643 intron fred - chr2L 3936712 intron fred - chr2L 3936780 intron fred - chr2L_4_3935001 chr2L_3935001 RAL-371_125b 110 chr2L 3943745 3943807 chr2L 3943886 3943948 4 141 2.0 3.5 2.8 1.1 203 chr2L 3943745 intron fred - chr2L 3943846 intron fred - chr2L 3943948 intron fred - chr2L_4_3940001 chr2L_3940001 RAL-371_125b 111 chr2L 4020316 4020332 chr2L 4020443 4020465 4 132 0.0 10.5 5.2 0.6 149 chr2L 4020316 intergenic not near genes chr2L 4020390 intergenic not near genes chr2L 4020465 intergenic not near genes chr2L_4_4020001 chr2L_4020001 RAL-371_125b 112 chr2L 4037750 4037807 chr2L 4037887 4037944 19 137 4.0 1.0 2.5 5.4 194 chr2L 4037750 intron ed + chr2L 4037847 intron ed + chr2L 4037944 intron ed + chr2L_19_4035001 chr2L_4035001 RAL-371_125b 113 chr2L 4066013 4066050 chr2L 4068873 4068916 Juan 8 2868 5.0 5.5 5.2 1.3 2903 chr2L 4066013 intron ed + chr2L 4067464 intron ed + chr2L 4068916 intron ed + chr2L_8_4065001 chr2L_4065001 RAL-371_125b 114 chr2L 4147923 4147958 chr2L 4148049 4148084 8 126 1.0 5.0 3.0 2.0 161 chr2L 4147923 intergenic not near genes chr2L 4148004 intergenic not near genes chr2L 4148084 intergenic not near genes chr2L_8_4145001 chr2L_4145001 RAL-371_125b 115 chr2L 4160488 4160507 chr2L 4160949 4160968 5 461 4.5 7.5 6.0 0.7 480 chr2L 4160488 intergenic not near genes chr2L 4160728 intergenic not near genes chr2L 4160968 intergenic not near genes chr2L_5_4160001 chr2L_4160001 RAL-371_125b 116 chr2L 4160514 4160523 chr2L 4160942 4160984 4 446 3.5 6.5 5.0 0.7 470 chr2L 4160514 intergenic not near genes chr2L 4160749 intergenic not near genes chr2L 4160984 intergenic not near genes chr2L_4_4160001 chr2L_4160001 RAL-371_125b 117 chr2L 4180081 4180108 chr2L 4180207 4180234 5 126 2.5 1.5 2.0 1.7 153 chr2L 4180081 intergenic not near genes chr2L 4180158 intergenic not near genes chr2L 4180234 intergenic not near genes chr2L_5_4180001 chr2L_4180001 RAL-371_125b 118 chr2L 4184428 4184504 chr2L 4184797 4184873 11 368 1.0 3.5 2.2 3.4 445 chr2L 4184428 intergenic not near genes chr2L 4184650 intergenic not near genes chr2L 4184873 intergenic not near genes chr2L_11_4180001 chr2L_4180001 RAL-371_125b 119 chr2L 4242389 4242403 chr2L 4242516 4242528 4 126 7.0 3.5 5.2 0.6 139 chr2L 4242389 5` UTR CR44058 + chr2L 4242458 intergenic CR44058 + chr2L 4242528 intergenic CR44058 + chr2L_4_4240001 chr2L_4240001 RAL-371_125b 120 chr2L 4242408 4242450 chr2L 4242504 4242516 9 114 2.5 2.5 2.5 2.6 108 chr2L 4242408 intergenic CR44058 + chr2L 4242462 intergenic CR44058 + chr2L 4242516 intergenic CR44058 + chr2L_9_4240001 chr2L_4240001 RAL-371_125b 121 chr2L 4265609 4265673 chr2L 4265749 4265813 12 138 2.0 2.0 2.0 4.0 204 chr2L 4265609 intergenic not near genes chr2L 4265711 intergenic not near genes chr2L 4265813 intergenic not near genes chr2L_12_4265001 chr2L_4265001 RAL-371_125b 122 chr2L 4293958 4293992 chr2L 4294099 4294134 7 142 4.5 7.0 5.8 1.0 176 chr2L 4293958 intron tutl + chr2L 4294046 intron tutl + chr2L 4294134 intron tutl + chr2L_7_4290001 chr2L_4290001 RAL-371_125b 123 chr2L 4351430 4351494 chr2L 4351556 4351620 15 121 3.5 5.0 4.2 2.9 190 chr2L 4351430 5` UTR CR44700 + chr2L 4351525 intergenic CR44700 + chr2L 4351620 intergenic CR44700 + chr2L_15_4350001 chr2L_4350001 RAL-371_125b 124 chr2L 4373504 4373525 chr2L 4373646 4373667 4 142 3.5 3.5 3.5 0.9 163 chr2L 4373504 intron Traf4 + chr2L 4373586 intron Traf4 + chr2L 4373667 intron Traf4 + chr2L_4_4370001 chr2L_4370001 RAL-371_125b 125 chr2L 4586930 4586987 chr2L 4587072 4587129 6 138 0.5 4.0 2.2 1.9 199 chr2L 4586930 intron dp - chr2L 4587030 intron dp - chr2L 4587129 intron dp - chr2L_6_4585001 chr2L_4585001 RAL-371_125b 126 chr2L 4601665 4601718 chr2L 4609156 4609209 mdg1 10 7487 6.0 4.0 5.0 1.7 7544 chr2L 4601665 intron dp - chr2L 4605437 intron dp - chr2L 4609209 intron dp - chr2L_10_4605001 chr2L_4605001 RAL-371_125b 127 chr2L 4622007 4622066 chr2L 4622139 4622193 5 131 2.5 1.0 1.8 1.8 186 chr2L 4622007 intergenic not near genes chr2L 4622100 intergenic not near genes chr2L 4622193 intergenic not near genes chr2L_5_4620001 chr2L_4620001 RAL-371_125b 128 chr2L 4661795 4661840 chr2L 4669425 4669470 opus 4 7630 4.0 8.5 6.2 0.6 7675 chr2L 4661795 intergenic not near genes chr2L 4665632 intergenic not near genes chr2L 4669470 intergenic not near genes chr2L_4_4665001 chr2L_4665001 RAL-371_125b 129 chr2L 4819448 4819518 chr2L 4819616 4819691 8 172 4.0 3.5 3.8 1.7 243 chr2L 4819448 intergenic not near genes chr2L 4819570 intergenic not near genes chr2L 4819691 intergenic not near genes chr2L_8_4815001 chr2L_4815001 RAL-371_125b 130 chr2L 4862251 4862282 chr2L 4862377 4862408 10 125 6.5 4.0 5.2 1.6 157 chr2L 4862251 intron pog + chr2L 4862330 intron pog + chr2L 4862408 intron pog + chr2L_10_4860001 chr2L_4860001 RAL-371_125b 131 chr2L 4901088 4901147 chr2L 4901240 4901299 8 152 3.5 4.0 3.8 1.7 211 chr2L 4901088 intron CG3036 + chr2L 4901194 intron CG3036 + chr2L 4901299 intron CG3036 + chr2L_8_4900001 chr2L_4900001 RAL-371_125b 132 chr2L 4918140 4918187 chr2L 4923263 4923310 jockey 7 5123 4.0 5.5 4.8 1.2 5170 chr2L 4918140 intron hoe1 - chr2L 4920725 intron hoe1 - chr2L 4923310 intron hoe1 - chr2L_7_4920001 chr2L_4920001 RAL-371_125b 133 chr2L 4925628 4925690 chr2L 4925757 4925818 10 128 1.5 3.5 2.5 2.9 190 chr2L 4925628 intron hoe1 - chr2L 4925723 intron hoe1 - chr2L 4925818 intron hoe1 - chr2L_10_4925001 chr2L_4925001 RAL-371_125b 134 chr2L 4953468 4953505 chr2L 4953759 4953796 pogo 8 291 4.5 3.5 4.0 1.6 328 chr2L 4953468 intergenic Jon25Bii - chr2L 4953632 intergenic Jon25Bii - chr2L 4953796 intergenic Jon25Bi - chr2L_8_4950001 chr2L_4950001 RAL-371_125b 135 chr2L 5040645 5040676 chr2L 5040791 5040822 7 146 8.0 5.0 6.5 0.9 177 chr2L 5040645 3` UTR,3` UTR CG14042 +,SP555 + chr2L 5040734 3` UTR,3` UTR,3` UTR CG14042 +,SP555 +,CG31650 - chr2L 5040822 3` UTR CG31650 - chr2L_7_5040001 chr2L_5040001 RAL-371_125b 136 chr2L 5040701 5040709 chr2L 5040782 5040855 6 133 4.5 4.5 4.5 1.1 154 chr2L 5040701 3` UTR,3` UTR,3` UTR CG14042 +,SP555 +,CG31650 - chr2L 5040778 3` UTR,3` UTR,3` UTR CG14042 +,SP555 +,CG31650 - chr2L 5040855 3` UTR CG31650 - chr2L_6_5040001 chr2L_5040001 RAL-371_125b 137 chr2L 5117248 5117320 chr2L 5117380 5117452 19 130 2.5 3.0 2.8 5.0 204 chr2L 5117248 intron Msp300 + chr2L 5117350 intron Msp300 + chr2L 5117452 intron Msp300 + chr2L_19_5115001 chr2L_5115001 RAL-371_125b 138 chr2L 5120950 5120993 chr2L 5121094 5121137 10 141 3.0 3.0 3.0 2.5 187 chr2L 5120950 intron Msp300 + chr2L 5121044 intron Msp300 + chr2L 5121137 intron Msp300 + chr2L_10_5120001 chr2L_5120001 RAL-371_125b 139 chr2L 5410004 5410049 chr2L 5410150 5410195 10 146 1.0 2.5 1.8 3.6 191 chr2L 5410004 intron H15 + chr2L 5410100 intron H15 + chr2L 5410195 intron H15 + chr2L_10_5410001 chr2L_5410001 RAL-371_125b 140 chr2L 5487974 5488031 chr2L 5488099 5488161 8 128 6.0 0.5 3.2 1.9 187 chr2L 5487974 intergenic not near genes chr2L 5488068 intergenic not near genes chr2L 5488161 intergenic not near genes chr2L_8_5485001 chr2L_5485001 RAL-371_125b 141 chr2L 5499029 5499046 chr2L 5499175 5499192 4 144 2.0 5.5 3.8 0.8 163 chr2L 5499029 intergenic not near genes chr2L 5499110 intergenic not near genes chr2L 5499192 intergenic not near genes chr2L_4_5495001 chr2L_5495001 RAL-371_125b 142 chr2L 5499049 5499072 chr2L 5499166 5499213 8 134 1.0 5.5 3.2 1.9 164 chr2L 5499049 intergenic not near genes chr2L 5499131 intergenic not near genes chr2L 5499213 intergenic not near genes chr2L_8_5495001 chr2L_5495001 RAL-371_125b 143 chr2L 5508488 5508550 chr2L 5508615 5508676 13 126 2.5 4.0 3.2 3.1 188 chr2L 5508488 intergenic not near genes chr2L 5508582 intergenic not near genes chr2L 5508676 intergenic not near genes chr2L_13_5505001 chr2L_5505001 RAL-371_125b 144 chr2L 5582149 5582220 chr2L 5582275 5582346 10 124 1.5 2.0 1.8 3.6 197 chr2L 5582149 intergenic not near genes chr2L 5582248 intergenic not near genes chr2L 5582346 intergenic not near genes chr2L_10_5580001 chr2L_5580001 RAL-371_125b 145 chr2L 5640047 5640113 chr2L 5640224 5640290 10 182 32.0 27.5 29.8 0.3 243 chr2L 5640047 intron CG31646 - chr2L 5640168 intron CG31646 - chr2L 5640290 exon CG31646 - chr2L_10_5640001 chr2L_5640001 RAL-371_125b 146 chr2L 5666299 5666316 chr2L 5666429 5666456 8 139 3.0 3.5 3.2 1.9 157 chr2L 5666299 intron Hsp60C + chr2L 5666378 intron Hsp60C + chr2L 5666456 intron Hsp60C + chr2L_8_5665001 chr2L_5665001 RAL-371_125b 147 chr2L 5676847 5676913 chr2L 5676987 5677059 9 142 4.5 3.5 4.0 1.8 212 chr2L 5676847 intergenic not near genes chr2L 5676953 intergenic not near genes chr2L 5677059 intergenic not near genes chr2L_9_5675001 chr2L_5675001 RAL-371_125b 148 chr2L 5695812 5695883 chr2L 5695954 5696025 12 141 3.5 1.5 2.5 3.4 213 chr2L 5695812 intergenic not near genes chr2L 5695918 intergenic not near genes chr2L 5696025 intergenic not near genes chr2L_12_5695001 chr2L_5695001 RAL-371_125b 149 chr2L 5764870 5764910 chr2L 5765029 5765068 4 159 0.0 4.5 2.2 1.2 198 chr2L 5764870 intron obst-E - chr2L 5764969 intron obst-E - chr2L 5765068 intron obst-E - chr2L_4_5760001 chr2L_5760001 RAL-371_125b 150 chr2L 5825025 5825105 chr2L 5825160 5825243 12 143 2.5 0.0 1.2 5.5 218 chr2L 5825025 5` UTR TrissinR + chr2L 5825134 5` UTR TrissinR + chr2L 5825243 5` UTR TrissinR + chr2L_12_5825001 chr2L_5825001 RAL-371_125b 151 chr2L 5827670 5827733 chr2L 5836728 5836791 roo 11 9055 4.0 2.0 3.0 2.8 9121 chr2L 5827670 intron TrissinR + chr2L 5832230 intron TrissinR + chr2L 5836791 intron TrissinR + chr2L_11_5830001 chr2L_5830001 RAL-371_125b 152 chr2L 5926218 5926452 chr2L 5926348 5926590 7 172 0.0 0.0 0.0 7.0 372 chr2L 5926218 intron dsf + chr2L 5926404 intron dsf + chr2L 5926590 intron dsf + chr2L_7_5925001 chr2L_5925001 RAL-371_125b 153 chr2L 6036993 6037053 chr2L 6037121 6037181 15 127 2.0 4.5 3.2 3.6 188 chr2L 6036993 5` UTR mtm - chr2L 6037087 3` UTR CG9117 - chr2L 6037181 exon CG9117 - chr2L_15_6035001 chr2L_6035001 RAL-371_125b 154 chr2L 6050401 6050452 chr2L 6050555 6050606 7 153 3.0 2.5 2.8 1.8 205 chr2L 6050401 3` UTR CG12393 + chr2L 6050504 intergenic CG12393 +,CG9135 + chr2L 6050606 intergenic CG12393 +,CG9135 + chr2L_7_6050001 chr2L_6050001 RAL-371_125b 155 chr2L 6130719 6130766 chr2L 6130854 6130900 5 135 6.0 0.0 3.0 1.2 181 chr2L 6130719 intergenic CG42730 -,tectonic -,CG9222 + chr2L 6130810 intergenic CG42730 -,tectonic -,CG9222 + chr2L 6130900 intergenic CG9222 +,CG42730 -,tectonic - chr2L_5_6130001 chr2L_6130001 RAL-371_125b 156 chr2L 6253576 6253621 chr2L 6253702 6253747 7 126 4.5 5.0 4.8 1.2 171 chr2L 6253576 intron Ddr + chr2L 6253662 intron Ddr + chr2L 6253747 intron Ddr + chr2L_7_6250001 chr2L_6250001 RAL-371_125b 157 chr2L 6283902 6283969 chr2L 6284058 6284130 10 160 1.5 0.0 0.8 5.6 228 chr2L 6283902 intron Ddr + chr2L 6284016 intron Ddr + chr2L 6284130 intron Ddr + chr2L_10_6280001 chr2L_6280001 RAL-371_125b 158 chr2L 6363108 6363142 chr2L 6366080 6366104 Burdock 13 2971 5.5 2.5 4.0 2.6 2996 chr2L 6363108 intergenic not near genes chr2L 6364606 intergenic not near genes chr2L 6366104 intergenic not near genes chr2L_13_6360001 chr2L_6360001 RAL-371_125b 159 chr2L 6390071 6390151 chr2L 6390204 6390281 7 130 1.5 0.0 0.8 3.9 210 chr2L 6390071 intron CG42368 - chr2L 6390176 intron CG42368 - chr2L 6390281 intron CG42368 - chr2L_7_6390001 chr2L_6390001 RAL-371_125b 160 chr2L 6458534 6458602 chr2L 6458665 6458733 8 123 4.0 6.0 5.0 1.3 199 chr2L 6458534 exon frj + chr2L 6458634 3` UTR frj + chr2L 6458733 3` UTR frj + chr2L_8_6455001 chr2L_6455001 RAL-371_125b 161 chr2L 6516019 6516030 chr2L 6516150 6516162 4 132 4.0 2.0 3.0 1.0 143 chr2L 6516019 intron CG31637 + chr2L 6516090 intron CG31637 + chr2L 6516162 intron CG31637 + chr2L_4_6515001 chr2L_6515001 RAL-371_125b 162 chr2L 6516031 6516066 chr2L 6516131 6516198 12 126 2.5 1.5 2.0 4.0 167 chr2L 6516031 intron CG31637 + chr2L 6516114 intron CG31637 + chr2L 6516198 intron CG31637 + chr2L_12_6515001 chr2L_6515001 RAL-371_125b 163 chr2L 6544324 6544393 chr2L 6544466 6544535 12 142 1.5 2.5 2.0 4.0 211 chr2L 6544324 intron eya - chr2L 6544430 intron eya - chr2L 6544535 intron eya - chr2L_12_6540001 chr2L_6540001 RAL-371_125b 164 chr2L 6746048 6746118 chr2L 6746174 6746244 16 121 2.5 2.5 2.5 4.6 196 chr2L 6746048 intron CG11221 + chr2L 6746146 intron CG11221 + chr2L 6746244 intron CG11221 + chr2L_16_6745001 chr2L_6745001 RAL-371_125b 165 chr2L 6771365 6771559 chr2L 6771492 6771721 7 143 0.0 0.0 0.0 7.0 356 chr2L 6771365 intron CG11321 - chr2L 6771543 intron CG11321 - chr2L 6771721 intron CG11321 - chr2L_7_6770001 chr2L_6770001 RAL-371_125b 166 chr2L 6771945 6772018 chr2L 6772082 6772136 7 134 3.0 0.0 1.5 2.8 191 chr2L 6771945 intron CG11321 - chr2L 6772040 intron CG11321 - chr2L 6772136 intron CG11321 - chr2L_7_6770001 chr2L_6770001 RAL-371_125b 167 chr2L 6772543 6772584 chr2L 6772676 6772711 4 132 3.0 5.0 4.0 0.8 168 chr2L 6772543 intron CG11321 - chr2L 6772627 5` UTR CG11321 - chr2L 6772711 5` UTR CG11321 - chr2L_4_6770001 chr2L_6770001 RAL-371_125b 168 chr2L 6783766 6783782 chr2L 6783892 6783908 4 126 3.0 4.0 3.5 0.9 142 chr2L 6783766 intron nrv1 - chr2L 6783837 intron nrv1 - chr2L 6783908 intron nrv1 - chr2L_4_6780001 chr2L_6780001 RAL-371_125b 169 chr2L 6787537 6787610 chr2L 6787664 6787737 18 126 0.5 2.0 1.2 8.2 200 chr2L 6787537 intergenic not near genes chr2L 6787637 intergenic not near genes chr2L 6787737 intergenic not near genes chr2L_18_6785001 chr2L_6785001 RAL-371_125b 170 chr2L 6818081 6818141 chr2L 6818220 6818264 5 135 2.5 5.0 3.8 1.0 183 chr2L 6818081 intergenic not near genes chr2L 6818172 intergenic not near genes chr2L 6818264 intergenic not near genes chr2L_5_6815001 chr2L_6815001 RAL-371_125b 171 chr2L 6850336 6850402 chr2L 6850469 6850535 11 130 3.0 3.0 3.0 2.8 199 chr2L 6850336 intergenic not near genes chr2L 6850436 intergenic not near genes chr2L 6850535 intergenic not near genes chr2L_11_6850001 chr2L_6850001 RAL-371_125b 172 chr2L 6867747 6867769 chr2L 6867887 6867909 5 140 4.0 8.5 6.2 0.7 162 chr2L 6867747 intron Nha1 - chr2L 6867828 intron Nha1 - chr2L 6867909 intron Nha1 - chr2L_5_6865001 chr2L_6865001 RAL-371_125b 173 chr2L 6876735 6876752 chr2L 6882976 6882993 diver 4 6241 9.5 7.5 8.5 0.4 6258 chr2L 6876735 intron Nlg2 + chr2L 6879864 intron Nlg2 + chr2L 6882993 intron Nlg2 + chr2L_4_6875001 chr2L_6875001 RAL-371_125b 174 chr2L 6876756 6876804 chr2L 6882970 6883023 diver 7 6234 3.5 7.0 5.2 1.1 6267 chr2L 6876756 intron Nlg2 + chr2L 6879890 intron Nlg2 + chr2L 6883023 intron Nlg2 + chr2L_7_6875001 chr2L_6875001 RAL-371_125b 175 chr2L 6891395 6891458 chr2L 6891543 6891605 11 147 5.0 3.0 4.0 2.2 210 chr2L 6891395 intron Nlg2 + chr2L 6891500 intron Nlg2 + chr2L 6891605 intron Nlg2 + chr2L_11_6890001 chr2L_6890001 RAL-371_125b 176 chr2L 6933910 6933931 chr2L 6934039 6934060 5 127 3.0 3.0 3.0 1.2 150 chr2L 6933910 exon CG18304 - chr2L 6933985 intron CG18304 - chr2L 6934060 exon CG18304 - chr2L_5_6930001 chr2L_6930001 RAL-371_125b 177 chr2L 7000346 7000392 chr2L 7000474 7000520 7 128 5.0 3.5 4.2 1.3 174 chr2L 7000346 intron uif - chr2L 7000433 intron uif - chr2L 7000520 intron uif - chr2L_7_7000001 chr2L_7000001 RAL-371_125b 178 chr2L 7039278 7039347 chr2L 7039440 7039509 15 162 4.5 2.5 3.5 3.3 231 chr2L 7039278 intron milt + chr2L 7039394 intron milt + chr2L 7039509 intron milt + chr2L_15_7035001 chr2L_7035001 RAL-371_125b 179 chr2L 7051088 7051147 chr2L 7051230 7051273 5 136 0.0 0.0 0.0 5.0 185 chr2L 7051088 intron milt + chr2L 7051180 intron milt + chr2L 7051273 intron milt + chr2L_5_7050001 chr2L_7050001 RAL-371_125b 180 chr2L 7081658 7081684 chr2L 7081789 7081815 7 129 7.0 2.5 4.8 1.2 157 chr2L 7081658 intron Pvf2 - chr2L 7081736 intron Pvf2 - chr2L 7081815 intron Pvf2 - chr2L_7_7080001 chr2L_7080001 RAL-371_125b 181 chr2L 7111729 7111769 chr2L 7111864 7111904 4 135 3.0 2.5 2.8 1.1 175 chr2L 7111729 intron Pvf3 - chr2L 7111816 intron Pvf3 - chr2L 7111904 intron Pvf3 - chr2L_4_7110001 chr2L_7110001 RAL-371_125b 182 chr2L 7111770 7111787 chr2L 7111840 7111922 4 119 1.5 0.5 1.0 2.0 152 chr2L 7111770 intron Pvf3 - chr2L 7111846 intron Pvf3 - chr2L 7111922 intron Pvf3 - chr2L_4_7110001 chr2L_7110001 RAL-371_125b 183 chr2L 7126827 7126848 chr2L 7126956 7126977 7 129 6.0 0.0 3.0 1.8 150 chr2L 7126827 intron Pvf3 - chr2L 7126902 intron Pvf3 - chr2L 7126977 intron Pvf3 - chr2L_7_7125001 chr2L_7125001 RAL-371_125b 184 chr2L 7165752 7165810 chr2L 7165883 7165941 7 130 1.5 5.0 3.2 1.7 189 chr2L 7165752 intergenic not near genes chr2L 7165846 intergenic not near genes chr2L 7165941 intergenic not near genes chr2L_7_7165001 chr2L_7165001 RAL-371_125b 185 chr2L 7268405 7268417 chr2L 7268535 7268547 4 130 0.0 1.5 0.8 2.2 142 chr2L 7268405 intron Wnt4 - chr2L 7268476 intron Wnt4 - chr2L 7268547 intron Wnt4 - chr2L_4_7265001 chr2L_7265001 RAL-371_125b 186 chr2L 7325902 7325934 chr2L 7326032 7326069 4 134 2.5 3.5 3.0 1.0 167 chr2L 7325902 intergenic not near genes chr2L 7325986 intergenic not near genes chr2L 7326069 intergenic not near genes chr2L_4_7325001 chr2L_7325001 RAL-371_125b 187 chr2L 7343280 7343350 chr2L 7350446 7350480 roo 11 7160 3.5 1.5 2.5 3.1 7200 chr2L 7343280 intron Wnt6 + chr2L 7346880 intron Wnt6 + chr2L 7350480 intron Wnt6 + chr2L_11_7345001 chr2L_7345001 RAL-371_125b 188 chr2L 7351006 7351056 chr2L 7351164 7351214 6 158 6.5 2.5 4.5 1.1 208 chr2L 7351006 intron Wnt6 + chr2L 7351110 intron Wnt6 + chr2L 7351214 exon Wnt6 + chr2L_6_7350001 chr2L_7350001 RAL-371_125b 189 chr2L 7384297 7384326 chr2L 7384428 7384457 5 131 7.0 3.0 5.0 0.8 160 chr2L 7384297 3` UTR ninaC + chr2L 7384377 intergenic ninaC +,CG5149 - chr2L 7384457 intergenic CG5149 -,ninaC + chr2L_5_7380001 chr2L_7380001 RAL-371_125b 190 chr2L 7399260 7399334 chr2L 7399683 7399702 24 419 0.0 8.0 4.0 4.8 442 chr2L 7399260 intergenic not near genes chr2L 7399481 intergenic not near genes chr2L 7399702 intergenic not near genes chr2L_24_7395001 chr2L_7395001 RAL-371_125b 191 chr2L 7397980 7398026 chr2L 7404669 7404716 5 6689 7.0 11.0 9.0 0.5 6736 chr2L 7397980 intron CG5160 - chr2L 7401348 5` UTR CG5171 + chr2L 7404716 intergenic CG5171 + chr2L_5_7400001 chr2L_7400001 RAL-371_125b 192 chr2L 7436156 7436221 chr2L 7436300 7436380 12 150 2.5 0.0 1.2 5.5 224 chr2L 7436156 intergenic not near genes chr2L 7436268 intergenic not near genes chr2L 7436380 intergenic not near genes chr2L_12_7435001 chr2L_7435001 RAL-371_125b 193 chr2L 5904539 5904541 chr2L 7466148 7466150 7 1561609 16.5 2.5 9.5 0.7 1561611 chr2L 5904539 intron CG9021 - chr2L 6685344 exon CG11327 - chr2L 7466150 intergenic CG6055 + chr2L_7_6685001 chr2L_6685001 RAL-371_125b 194 chr2L 7493353 7493421 chr2L 7493494 7493557 7 137 0.0 2.5 1.2 3.2 204 chr2L 7493353 intron Ziz - chr2L 7493455 intron Ziz - chr2L 7493557 intron Ziz - chr2L_7_7490001 chr2L_7490001 RAL-371_125b 195 chr2L 7555220 7555230 chr2L 7555331 7555357 5 123 0.0 6.0 3.0 1.2 137 chr2L 7555220 intron RapGAP1 - chr2L 7555288 intron RapGAP1 - chr2L 7555357 intron RapGAP1 - chr2L_5_7555001 chr2L_7555001 RAL-371_125b 196 chr2L 7625141 7625166 chr2L 7625289 7625314 6 145 3.0 8.5 5.8 0.9 173 chr2L 7625141 intergenic not near genes chr2L 7625228 intergenic not near genes chr2L 7625314 intergenic not near genes chr2L_6_7625001 chr2L_7625001 RAL-371_125b 197 chr2L 7766601 7766634 chr2L 7766712 7766745 5 101 4.0 2.0 3.0 1.2 144 chr2L 7766601 intergenic not near genes chr2L 7766673 intergenic not near genes chr2L 7766745 intergenic not near genes chr2L_5_7765001 chr2L_7765001 RAL-371_125b 198 chr2L 7814082 7814149 chr2L 7814210 7814271 9 127 2.5 2.5 2.5 2.6 189 chr2L 7814082 intron LanB1 + chr2L 7814176 intron LanB1 + chr2L 7814271 intron LanB1 + chr2L_9_7810001 chr2L_7810001 RAL-371_125b 199 chr2L 7861268 7861323 chr2L 7861422 7861477 14 154 5.0 3.0 4.0 2.8 209 chr2L 7861268 intergenic TwdlE - chr2L 7861372 intergenic not near genes chr2L 7861477 intergenic not near genes chr2L_14_7860001 chr2L_7860001 RAL-371_125b 200 chr2L 7924571 7924644 chr2L 7924698 7924771 16 126 2.5 3.0 2.8 4.2 200 chr2L 7924571 intron Snoo - chr2L 7924671 intron Snoo - chr2L 7924771 intron Snoo - chr2L_16_7920001 chr2L_7920001 RAL-371_125b 201 chr2L 7941154 7941193 chr2L 7941283 7941322 8 124 7.5 7.5 7.5 0.9 168 chr2L 7941154 intron Snoo - chr2L 7941238 intron Snoo - chr2L 7941322 intron Snoo - chr2L_8_7940001 chr2L_7940001 RAL-371_125b 202 chr2L 7959003 7959071 chr2L 7960458 7960534 pogo 11 1461 3.5 2.0 2.8 2.9 1531 chr2L 7959003 intron Snoo - chr2L 7959768 intron Snoo - chr2L 7960534 intron Snoo - chr2L_11_7955001 chr2L_7955001 RAL-371_125b 203 chr2L 7977056 7977110 chr2L 7984080 7984116 297 4 7016 1.5 3.5 2.5 1.1 7060 chr2L 7977056 intron Snoo - chr2L 7980586 intron Snoo - chr2L 7984116 intron,5` UTR Snoo -,CG7231 + chr2L_4_7980001 chr2L_7980001 RAL-371_125b 204 chr2L 7986878 7986918 chr2L 7987014 7987055 5 137 2.5 4.5 3.5 1.1 177 chr2L 7986878 3` UTR pes - chr2L 7986966 3` UTR pes - chr2L 7987055 3` UTR pes - chr2L_5_7985001 chr2L_7985001 RAL-371_125b 205 chr2L 7987748 7987801 chr2L 7987864 7987933 12 122 4.0 5.0 4.5 2.2 185 chr2L 7987748 3` UTR pes - chr2L 7987840 3` UTR pes - chr2L 7987933 exon pes - chr2L_12_7985001 chr2L_7985001 RAL-371_125b 206 chr2L 8013618 8013637 chr2L 8023603 8023622 copia 5 9985 5.0 3.0 4.0 1.0 10004 chr2L 8013618 intron Tg + chr2L 8018620 intron Tg + chr2L 8023622 intron Tg + chr2L_5_8015001 chr2L_8015001 RAL-371_125b 207 chr2L 8034552 8034583 chr2L 8034712 8034743 6 160 10.0 5.5 7.8 0.7 191 chr2L 8034552 intron,intron CG7367 -,Cka + chr2L 8034648 intron,intron CG7367 -,Cka + chr2L 8034743 intron,intron CG7367 -,Cka + chr2L_6_8030001 chr2L_8030001 RAL-371_125b 208 chr2L 8044061 8044116 chr2L 8044179 8044245 10 124 5.5 3.5 4.5 1.8 184 chr2L 8044061 exon CG7466 + chr2L 8044153 intron CG7466 + chr2L 8044245 intron CG7466 + chr2L_10_8040001 chr2L_8040001 RAL-371_125b 209 chr2L 8184891 8184946 chr2L 8185022 8185087 9 137 3.5 5.0 4.2 1.7 196 chr2L 8184891 intron Piezo + chr2L 8184989 intron Piezo + chr2L 8185087 intron Piezo + chr2L_9_8180001 chr2L_8180001 RAL-371_125b 210 chr2L 8266156 8266230 chr2L 8266340 8266414 8 184 2.0 1.5 1.8 2.9 258 chr2L 8266156 intron Btk29A - chr2L 8266285 intron Btk29A - chr2L 8266414 intron Btk29A - chr2L_8_8265001 chr2L_8265001 RAL-371_125b 211 chr2L 8323656 8323676 chr2L 8323807 8323827 6 151 6.5 3.0 4.8 1.0 171 chr2L 8323656 intron CG7781 - chr2L 8323742 intron CG7781 - chr2L 8323827 intron CG7781 - chr2L_6_8320001 chr2L_8320001 RAL-371_125b 212 chr2L 8323706 8323729 chr2L 8323796 8323879 5 131 3.0 1.5 2.2 1.6 173 chr2L 8323706 intron CG7781 - chr2L 8323792 intron CG7781 - chr2L 8323879 intron CG7781 - chr2L_5_8320001 chr2L_8320001 RAL-371_125b 213 chr2L 8336898 8336956 chr2L 8337027 8337085 9 129 3.0 3.5 3.2 2.1 187 chr2L 8336898 intergenic not near genes chr2L 8336992 intergenic not near genes chr2L 8337085 intergenic not near genes chr2L_9_8335001 chr2L_8335001 RAL-371_125b 214 chr2L 8349557 8349616 chr2L 8349712 8349771 7 154 5.5 3.0 4.2 1.3 214 chr2L 8349557 exon CG7778 + chr2L 8349664 intron CG7778 + chr2L 8349771 exon CG7778 + chr2L_7_8345001 chr2L_8345001 RAL-371_125b 215 chr2L 8351508 8351553 chr2L 8351635 8351680 4 127 0.0 2.0 1.0 2.0 172 chr2L 8351508 intergenic CG7778 + chr2L 8351594 intergenic CG7778 + chr2L 8351680 intergenic not near genes chr2L_4_8350001 chr2L_8350001 RAL-371_125b 216 chr2L 8452380 8452440 chr2L 8461601 8461661 roo 11 9221 4.5 3.0 3.8 2.3 9281 chr2L 8452380 intron fu12 - chr2L 8457020 intron fu12 - chr2L 8461661 intron fu12 - chr2L_11_8455001 chr2L_8455001 RAL-371_125b 217 chr2L 8502615 8502624 chr2L 8502749 8502758 4 134 7.0 4.0 5.5 0.6 143 chr2L 8502615 intron Dh31 - chr2L 8502686 intron Dh31 - chr2L 8502758 intron Dh31 - chr2L_4_8500001 chr2L_8500001 RAL-371_125b 218 chr2L 8502639 8502672 chr2L 8502746 8502806 12 130 4.5 4.0 4.2 2.3 167 chr2L 8502639 intron Dh31 - chr2L 8502722 intron Dh31 - chr2L 8502806 intron Dh31 - chr2L_12_8500001 chr2L_8500001 RAL-371_125b 219 chr2L 8505113 8505184 chr2L 8505263 8505334 8 150 3.0 3.5 3.2 1.9 221 chr2L 8505113 intron Dh31 - chr2L 8505224 intron Dh31 - chr2L 8505334 intron Dh31 - chr2L_8_8505001 chr2L_8505001 RAL-371_125b 220 chr2L 8508971 8509004 chr2L 8509123 8509156 5 152 0.0 5.0 2.5 1.4 185 chr2L 8508971 intergenic CG13096 - chr2L 8509064 intergenic CG13096 - chr2L 8509156 3` UTR CG13096 - chr2L_5_8505001 chr2L_8505001 RAL-371_125b 221 chr2L 8554322 8554376 chr2L 8554468 8554522 13 146 4.0 7.0 5.5 2.0 200 chr2L 8554322 intron Sema-1a + chr2L 8554422 intron Sema-1a + chr2L 8554522 intron Sema-1a + chr2L_13_8550001 chr2L_8550001 RAL-371_125b 222 chr2L 8587267 8587314 chr2L 8587396 8587443 13 128 3.5 4.5 4.0 2.6 176 chr2L 8587267 intron Sema-1a + chr2L 8587355 intron Sema-1a + chr2L 8587443 intron Sema-1a + chr2L_13_8585001 chr2L_8585001 RAL-371_125b 223 chr2L 8653322 8653368 chr2L 8653449 8653495 6 127 2.5 0.5 1.5 2.4 173 chr2L 8653322 intron Sema-1a + chr2L 8653408 intron Sema-1a + chr2L 8653495 intron Sema-1a + chr2L_6_8650001 chr2L_8650001 RAL-371_125b 224 chr2L 8654187 8654236 chr2L 8654341 8654390 10 145 2.0 5.0 3.5 2.2 203 chr2L 8654187 exon Sema-1a + chr2L 8654288 intron Sema-1a + chr2L 8654390 intron Sema-1a + chr2L_10_8650001 chr2L_8650001 RAL-371_125b 225 chr2L 8689658 8689733 chr2L 8689805 8689848 17 138 2.0 2.5 2.2 5.3 190 chr2L 8689658 intron Hnf4 - chr2L 8689753 intron Hnf4 - chr2L 8689848 exon Hnf4 - chr2L_17_8685001 chr2L_8685001 RAL-371_125b 226 chr2L 8723082 8723139 chr2L 8731501 8731566 Tirant 13 8425 4.5 5.5 5.0 2.2 8484 chr2L 8723082 intron raw - chr2L 8727324 intron raw - chr2L 8731566 intron raw - chr2L_13_8725001 chr2L_8725001 RAL-371_125b 227 chr2L 8736219 8736246 chr2L 8736349 8736376 7 130 0.0 0.5 0.2 5.8 157 chr2L 8736219 intron raw - chr2L 8736298 intron raw - chr2L 8736376 intron raw - chr2L_7_8735001 chr2L_8735001 RAL-371_125b 228 chr2L 8788147 8788203 chr2L 8788283 8788328 11 135 6.0 2.0 4.0 2.2 181 chr2L 8788147 intergenic not near genes chr2L 8788238 intergenic not near genes chr2L 8788328 intergenic not near genes chr2L_11_8785001 chr2L_8785001 RAL-371_125b 229 chr2L 8799760 8799811 chr2L 8799926 8799976 15 161 4.5 3.5 4.0 3.0 216 chr2L 8799760 intergenic not near genes chr2L 8799868 intergenic not near genes chr2L 8799976 intergenic not near genes chr2L_15_8795001 chr2L_8795001 RAL-371_125b 230 chr2L 8815398 8815464 chr2L 8815531 8815597 9 131 3.5 5.5 4.5 1.6 199 chr2L 8815398 intergenic not near genes chr2L 8815498 intergenic not near genes chr2L 8815597 intergenic not near genes chr2L_9_8815001 chr2L_8815001 RAL-371_125b 231 chr2L 9000254 9000284 chr2L 9007814 9007844 roo 9 7559 5.5 0.0 2.8 2.4 7590 chr2L 9000254 intergenic Try29F + chr2L 9004049 intergenic not near genes chr2L 9007844 intergenic not near genes chr2L_9_9000001 chr2L_9000001 RAL-371_125b 232 chr2L 9023115 9023184 chr2L 9023262 9023305 20 145 4.5 1.0 2.8 5.3 190 chr2L 9023115 intergenic not near genes chr2L 9023210 intergenic not near genes chr2L 9023305 intergenic not near genes chr2L_20_9020001 chr2L_9020001 RAL-371_125b 233 chr2L 9035115 9035166 chr2L 9035243 9035298 9 132 4.0 0.0 2.0 3.0 183 chr2L 9035115 intergenic not near genes chr2L 9035206 intergenic not near genes chr2L 9035298 intergenic not near genes chr2L_9_9035001 chr2L_9035001 RAL-371_125b 234 chr2L 9042448 9042482 chr2L 9042584 9042618 5 136 4.0 0.0 2.0 1.7 170 chr2L 9042448 intergenic not near genes chr2L 9042533 intergenic not near genes chr2L 9042618 intergenic not near genes chr2L_5_9040001 chr2L_9040001 RAL-371_125b 235 chr2L 9084339 9084340 chr2L 16217660 16217660 9 7133321 12.0 11.5 11.8 0.7 7133321 chr2L 9084339 intron Toll-4 + chr2L 12651000 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_9_12650001 chr2L_12650001 RAL-371_125b 236 chr2L 9105703 9105774 chr2L 9105904 9105975 10 192 3.0 3.5 3.2 2.4 272 chr2L 9105703 intergenic not near genes chr2L 9105839 intergenic not near genes chr2L 9105975 intergenic not near genes chr2L_10_9105001 chr2L_9105001 RAL-371_125b 237 chr2L 9152143 9152183 chr2L 9152270 9152310 6 126 0.0 6.0 3.0 1.5 167 chr2L 9152143 intron CG32982 + chr2L 9152226 intron CG32982 + chr2L 9152310 intron CG32982 + chr2L_6_9150001 chr2L_9150001 RAL-371_125b 238 chr2L 9158754 9158821 chr2L 9158901 9158971 5 148 2.0 0.0 1.0 2.5 217 chr2L 9158754 intron CG32982 + chr2L 9158862 intron CG32982 + chr2L 9158971 intron CG32982 + chr2L_5_9155001 chr2L_9155001 RAL-371_125b 239 chr2L 9173024 9173090 chr2L 9173151 9173172 5 116 2.0 2.5 2.2 1.6 148 chr2L 9173024 intron tai + chr2L 9173098 intron tai + chr2L 9173172 intron tai + chr2L_5_9170001 chr2L_9170001 RAL-371_125b 240 chr2L 9190900 9190955 chr2L 9191039 9191086 4 133 0.5 4.0 2.2 1.2 186 chr2L 9190900 intron tai + chr2L 9190993 intron tai + chr2L 9191086 intron tai + chr2L_4_9190001 chr2L_9190001 RAL-371_125b 241 chr2L 9195832 9195862 chr2L 9195965 9195995 8 133 3.0 6.5 4.8 1.4 163 chr2L 9195832 intron tai + chr2L 9195914 intron tai + chr2L 9195995 intron tai + chr2L_8_9195001 chr2L_9195001 RAL-371_125b 242 chr2L 9217944 9217982 chr2L 9222781 9222827 Doc 4 4841 2.5 1.0 1.8 1.4 4883 chr2L 9217944 intron tai + chr2L 9220386 intron tai + chr2L 9222827 intron tai + chr2L_4_9220001 chr2L_9220001 RAL-371_125b 243 chr2L 9264302 9264362 chr2L 9264452 9264500 10 149 4.5 4.0 4.2 1.9 198 chr2L 9264302 intron Ggamma30A + chr2L 9264401 intron Ggamma30A + chr2L 9264500 intron Ggamma30A + chr2L_10_9260001 chr2L_9260001 RAL-371_125b 244 chr2L 9270702 9270761 chr2L 9270847 9270906 15 140 7.5 6.5 7.0 1.9 204 chr2L 9270702 intron Ggamma30A + chr2L 9270804 intron Ggamma30A + chr2L 9270906 intron Ggamma30A + chr2L_15_9270001 chr2L_9270001 RAL-371_125b 245 chr2L 9279950 9279961 chr2L 9280094 9280105 4 144 9.0 1.5 5.2 0.6 155 chr2L 9279950 intron Ggamma30A + chr2L 9280028 intron Ggamma30A + chr2L 9280105 intron Ggamma30A + chr2L_4_9280001 chr2L_9280001 RAL-371_125b 246 chr2L 9279971 9280009 chr2L 9280084 9280153 4 124 4.0 1.0 2.5 1.1 182 chr2L 9279971 intron Ggamma30A + chr2L 9280062 intron Ggamma30A + chr2L 9280153 intron Ggamma30A + chr2L_4_9280001 chr2L_9280001 RAL-371_125b 247 chr2L 9297329 9297400 chr2L 9297456 9297527 17 124 4.5 5.5 5.0 2.8 198 chr2L 9297329 3` UTR Ggamma30A + chr2L 9297428 3` UTR Ggamma30A + chr2L 9297527 3` UTR Ggamma30A + chr2L_17_9295001 chr2L_9295001 RAL-371_125b 248 chr2L 9303485 9303540 chr2L 9303615 9303670 10 130 3.0 3.0 3.0 2.5 185 chr2L 9303485 intergenic not near genes chr2L 9303578 intergenic not near genes chr2L 9303670 intergenic not near genes chr2L_10_9300001 chr2L_9300001 RAL-371_125b 249 chr2L 9304462 9304513 chr2L 9304591 9304642 7 129 2.5 3.5 3.0 1.8 180 chr2L 9304462 3` UTR CR42844 - chr2L 9304552 3` UTR CR42844 - chr2L 9304642 3` UTR CR42844 - chr2L_7_9300001 chr2L_9300001 RAL-371_125b 250 chr2L 9362097 9362152 chr2L 9362225 9362280 10 128 2.5 3.0 2.8 2.6 183 chr2L 9362097 intergenic not near genes chr2L 9362188 intergenic not near genes chr2L 9362280 intergenic not near genes chr2L_10_9360001 chr2L_9360001 RAL-371_125b 251 chr2L 9379399 9379472 chr2L 9379680 9379753 8 281 4.5 1.5 3.0 2.0 354 chr2L 9379399 intron Shawl - chr2L 9379576 intron Shawl - chr2L 9379753 exon Shawl - chr2L_8_9375001 chr2L_9375001 RAL-371_125b 252 chr2L 9385077 9385140 chr2L 9385217 9385280 15 140 4.0 4.5 4.2 2.9 203 chr2L 9385077 intron Shawl - chr2L 9385178 intron Shawl - chr2L 9385280 intron Shawl - chr2L_15_9385001 chr2L_9385001 RAL-371_125b 253 chr2L 9387186 9387277 chr2L 9387348 9387420 9 151 0.0 0.5 0.2 7.5 234 chr2L 9387186 intron Shawl - chr2L 9387303 intron Shawl - chr2L 9387420 intron,5` UTR Shawl -,Aldh + chr2L_9_9385001 chr2L_9385001 RAL-371_125b 254 chr2L 9393452 9393485 chr2L 9396469 9396502 jockey 10 3017 7.0 4.5 5.8 1.5 3050 chr2L 9393452 intron Shawl - chr2L 9394977 intron Shawl - chr2L 9396502 intron Shawl - chr2L_10_9390001 chr2L_9390001 RAL-371_125b 255 chr2L 9393492 9393519 chr2L 9396464 9396536 jockey 8 3008 2.0 4.0 3.0 2.0 3044 chr2L 9393492 intron Shawl - chr2L 9395014 intron Shawl - chr2L 9396536 intron Shawl - chr2L_8_9395001 chr2L_9395001 RAL-371_125b 256 chr2L 9407862 9407888 chr2L 9407994 9408020 6 132 6.0 3.0 4.5 1.1 158 chr2L 9407862 intron Shawl - chr2L 9407941 intron Shawl - chr2L 9408020 intron Shawl - chr2L_6_9405001 chr2L_9405001 RAL-371_125b 257 chr2L 9428459 9428534 chr2L 9428588 9428663 6 119 2.0 2.5 2.2 1.9 204 chr2L 9428459 exon CG42847 + chr2L 9428561 3` UTR CG42847 + chr2L 9428663 3` UTR CG42847 + chr2L_6_9425001 chr2L_9425001 RAL-371_125b 258 chr2L 9454937 9455001 chr2L 9455089 9455132 12 150 3.5 6.0 4.8 2.1 195 chr2L 9454937 intron numb + chr2L 9455034 intron numb + chr2L 9455132 intron numb + chr2L_12_9455001 chr2L_9455001 RAL-371_125b 259 chr2L 9457028 9457094 chr2L 9457155 9457211 10 126 4.0 3.0 3.5 2.2 183 chr2L 9457028 intron numb + chr2L 9457120 intron numb + chr2L 9457211 intron numb + chr2L_10_9455001 chr2L_9455001 RAL-371_125b 260 chr2L 9474786 9474810 chr2L 9474923 9474952 7 141 1.0 4.5 2.8 1.8 166 chr2L 9474786 intergenic not near genes chr2L 9474869 intergenic not near genes chr2L 9474952 intergenic not near genes chr2L_7_9470001 chr2L_9470001 RAL-371_125b 261 chr2L 9522173 9522211 chr2L 9522311 9522349 6 138 4.5 5.0 4.8 1.0 176 chr2L 9522173 intron Oatp30B + chr2L 9522261 intron Oatp30B + chr2L 9522349 intron Oatp30B + chr2L_6_9520001 chr2L_9520001 RAL-371_125b 262 chr2L 9543726 9543784 chr2L 9543853 9543912 8 127 0.0 2.0 1.0 4.0 186 chr2L 9543726 intergenic Cpr30B +,CG13113 + chr2L 9543819 intergenic Cpr30B +,CG13113 + chr2L 9543912 intergenic Cpr30B +,CG13113 + chr2L_8_9540001 chr2L_9540001 RAL-371_125b 263 chr2L 9681225 9681252 chr2L 9681361 9681381 8 133 12.0 4.5 8.2 0.9 156 chr2L 9681225 intergenic not near genes chr2L 9681303 intergenic not near genes chr2L 9681381 intergenic not near genes chr2L_8_9680001 chr2L_9680001 RAL-371_125b 264 chr2L 9681274 9681288 chr2L 9681354 9681378 6 118 5.5 3.5 4.5 1.1 104 chr2L 9681274 intergenic not near genes chr2L 9681326 intergenic not near genes chr2L 9681378 intergenic not near genes chr2L_6_9680001 chr2L_9680001 RAL-371_125b 265 chr2L 9718978 9719025 chr2L 9719085 9719153 18 125 2.0 4.5 3.2 4.3 175 chr2L 9718978 intron Nckx30C - chr2L 9719066 intron Nckx30C - chr2L 9719153 intron Nckx30C - chr2L_18_9715001 chr2L_9715001 RAL-371_125b 266 chr2L 9730958 9731006 chr2L 9731091 9731139 10 133 2.5 5.0 3.8 2.1 181 chr2L 9730958 intron Nckx30C - chr2L 9731048 intron Nckx30C - chr2L 9731139 intron Nckx30C - chr2L_10_9730001 chr2L_9730001 RAL-371_125b 267 chr2L 9767853 9767930 chr2L 9767982 9768059 12 127 2.5 1.5 2.0 4.0 206 chr2L 9767853 intron,exon ppk18 -,CG4017 + chr2L 9767956 intron,exon ppk18 -,CG4017 + chr2L 9768059 intron,exon ppk18 -,CG4017 + chr2L_12_9765001 chr2L_9765001 RAL-371_125b 268 chr2L 9775960 9776003 chr2L 9776092 9776135 6 132 0.0 4.0 2.0 2.0 175 chr2L 9775960 intergenic not near genes chr2L 9776048 intergenic not near genes chr2L 9776135 intergenic not near genes chr2L_6_9775001 chr2L_9775001 RAL-371_125b 269 chr2L 9871487 9871534 chr2L 9871621 9871668 10 134 2.0 4.5 3.2 2.4 181 chr2L 9871487 intron nAChRalpha6 - chr2L 9871578 intron nAChRalpha6 - chr2L 9871668 intron nAChRalpha6 - chr2L_10_9870001 chr2L_9870001 RAL-371_125b 270 chr2L 9892495 9892532 chr2L 9892621 9892658 6 126 1.0 4.0 2.5 1.7 163 chr2L 9892495 intron mtDNA-helicase - chr2L 9892576 intron mtDNA-helicase - chr2L 9892658 exon mtDNA-helicase - chr2L_6_9890001 chr2L_9890001 RAL-371_125b 271 chr2L 9973703 9973745 chr2L 9980852 9980914 HMS-Beagle 10 7167 5.0 7.0 6.0 1.4 7211 chr2L 9973703 intergenic not near genes chr2L 9977308 intergenic not near genes chr2L 9980914 intergenic not near genes chr2L_10_9975001 chr2L_9975001 RAL-371_125b 272 chr2L 9986304 9986374 chr2L 9986449 9986509 15 140 3.0 3.0 3.0 3.8 205 chr2L 9986304 intron bib + chr2L 9986406 intron bib + chr2L 9986509 intron bib + chr2L_15_9985001 chr2L_9985001 RAL-371_125b 273 chr2L 10051684 10051747 chr2L 10051819 10051882 8 122 4.5 4.5 4.5 1.5 198 chr2L 10051684 5` UTR CR44874 + chr2L 10051783 5` UTR CR44874 + chr2L 10051882 5` UTR CR44874 + chr2L_8_10050001 chr2L_10050001 RAL-371_125b 274 chr2L 10114972 10114994 chr2L 10115106 10115128 5 134 2.0 5.5 3.8 1.0 156 chr2L 10114972 intron,intron CG44153 -,CG34109 + chr2L 10115050 intron,intron CG44153 -,CG34109 + chr2L 10115128 intron,intron CG44153 -,CG34109 + chr2L_5_10115001 chr2L_10115001 RAL-371_125b 275 chr2L 10138166 10138180 chr2L 10143460 10143463 Rt1c 4 5291 4.0 7.5 5.8 0.6 5297 chr2L 10138166 intron CG44153 - chr2L 10140814 intron CG44153 - chr2L 10143463 intron CG44153 - chr2L_4_10140001 chr2L_10140001 RAL-371_125b 276 chr2L 10153181 10153225 chr2L 10153288 10153348 9 124 4.0 3.0 3.5 2.0 167 chr2L 10153181 intron,exon CG44153 -,CG4839 + chr2L 10153264 intron,intron CG44153 -,CG4839 + chr2L 10153348 intron,exon CG44153 -,CG4839 + chr2L_9_10150001 chr2L_10150001 RAL-371_125b 277 chr2L 10156293 10156344 chr2L 10163813 10163844 blood 7 7516 3.5 2.0 2.8 1.8 7551 chr2L 10156293 intron,3` UTR CG44153 -,CG4839 + chr2L 10160068 intron CG44153 - chr2L 10163844 intron CG44153 - chr2L_7_10160001 chr2L_10160001 RAL-371_125b 278 chr2L 10171119 10171175 chr2L 10171267 10171322 6 148 4.5 0.0 2.2 1.9 203 chr2L 10171119 intron CG44153 - chr2L 10171220 intron CG44153 - chr2L 10171322 intron CG44153 - chr2L_6_10170001 chr2L_10170001 RAL-371_125b 279 chr2L 10177360 10177387 chr2L 10177491 10177517 8 130 3.0 1.5 2.2 2.5 157 chr2L 10177360 intron CG44153 - chr2L 10177438 intron CG44153 - chr2L 10177517 intron CG44153 - chr2L_8_10175001 chr2L_10175001 RAL-371_125b 280 chr2L 10191414 10191458 chr2L 10191547 10191591 11 133 4.0 3.5 3.8 2.3 177 chr2L 10191414 intron,exon Sur -,CG31874 - chr2L 10191502 intron Sur - chr2L 10191591 intron Sur - chr2L_11_10190001 chr2L_10190001 RAL-371_125b 281 chr2L 10209800 10209819 chr2L 10209927 10209946 5 127 3.5 1.5 2.5 1.4 146 chr2L 10209800 intergenic CR44845 +,CG5727 -,CG5731 - chr2L 10209873 3` UTR CG5727 - chr2L 10209946 3` UTR CG5727 - chr2L_5_10205001 chr2L_10205001 RAL-371_125b 282 chr2L 10247248 10247313 chr2L 10247391 10247456 4 143 3.5 2.0 2.8 1.1 208 chr2L 10247248 intergenic chico -,bsk - chr2L 10247352 intergenic bsk -,chico - chr2L 10247456 intergenic bsk -,chico - chr2L_4_10245001 chr2L_10245001 RAL-371_125b 283 chr2L 10258389 10258438 chr2L 10258516 10258573 9 134 2.0 3.5 2.8 2.4 184 chr2L 10258389 exon Pten - chr2L 10258481 intron Pten - chr2L 10258573 exon Pten - chr2L_9_10255001 chr2L_10255001 RAL-371_125b 284 chr2L 10281641 10281682 chr2L 10281771 10281838 5 144 0.0 2.5 1.2 2.3 197 chr2L 10281641 intergenic CG5604 - chr2L 10281740 intergenic CG5604 - chr2L 10281838 intergenic CG5604 - chr2L_5_10280001 chr2L_10280001 RAL-371_125b 285 chr2L 10294121 10294193 chr2L 10294244 10294319 12 125 1.5 1.0 1.2 5.5 198 chr2L 10294121 intron Hand - chr2L 10294220 intron Hand - chr2L 10294319 intron Hand - chr2L_12_10290001 chr2L_10290001 RAL-371_125b 286 chr2L 10294628 10294690 chr2L 10294764 10294826 9 136 4.5 1.5 3.0 2.2 198 chr2L 10294628 exon Hand - chr2L 10294727 intron Hand - chr2L 10294826 intron Hand - chr2L_9_10290001 chr2L_10290001 RAL-371_125b 287 chr2L 10395492 10395545 chr2L 10395627 10395680 4 135 3.5 1.0 2.2 1.2 188 chr2L 10395492 intron Mdh1 - chr2L 10395586 intron Mdh1 - chr2L 10395680 intron Mdh1 - chr2L_4_10395001 chr2L_10395001 RAL-371_125b 288 chr2L 10474335 10474401 chr2L 10474466 10474532 7 125 6.0 1.0 3.5 1.6 197 chr2L 10474335 5` UTR RluA-1 - chr2L 10474434 intergenic RluA-1 - chr2L 10474532 intergenic RluA-1 - chr2L_7_10470001 chr2L_10470001 RAL-371_125b 289 chr2L 10490231 10490300 chr2L 10490363 10490431 10 132 4.5 5.0 4.8 1.7 200 chr2L 10490231 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490331 3` UTR,3` UTR CG6144 +,CG13144 - chr2L 10490431 3` UTR,3` UTR CG6144 +,CG13144 - chr2L_10_10490001 chr2L_10490001 RAL-371_125b 290 chr2L 10495288 10495307 chr2L 10495415 10495434 7 127 6.5 8.5 7.5 0.8 146 chr2L 10495288 intron Myo31DF - chr2L 10495361 intron Myo31DF - chr2L 10495434 intron Myo31DF - chr2L_7_10495001 chr2L_10495001 RAL-371_125b 291 chr2L 10515313 10515385 chr2L 10515456 10515528 9 143 4.0 2.0 3.0 2.2 215 chr2L 10515313 intron,intron CG45083 -,Fatp - chr2L 10515420 intron,intron CG45083 -,Fatp - chr2L 10515528 intron,intron CG45083 -,Fatp - chr2L_9_10515001 chr2L_10515001 RAL-371_125b 292 chr2L 10540824 10540867 chr2L 10540952 10540995 8 128 1.5 2.0 1.8 2.9 171 chr2L 10540824 intergenic not near genes chr2L 10540910 intergenic not near genes chr2L 10540995 intergenic not near genes chr2L_8_10540001 chr2L_10540001 RAL-371_125b 293 chr2L 10554288 10554349 chr2L 10554421 10554482 10 132 5.5 3.5 4.5 1.8 194 chr2L 10554288 intron Trim9 + chr2L 10554385 intron Trim9 + chr2L 10554482 intron Trim9 + chr2L_10_10550001 chr2L_10550001 RAL-371_125b 294 chr2L 10563875 10563931 chr2L 10564018 10564074 5 137 1.5 3.5 2.5 1.4 199 chr2L 10563875 intron Trim9 + chr2L 10563974 intron Trim9 + chr2L 10564074 intron Trim9 + chr2L_5_10560001 chr2L_10560001 RAL-371_125b 295 chr2L 10580749 10580818 chr2L 10580880 10580927 13 129 1.0 2.5 1.8 4.6 178 chr2L 10580749 intron Trim9 + chr2L 10580838 intron Trim9 + chr2L 10580927 intron Trim9 + chr2L_13_10580001 chr2L_10580001 RAL-371_125b 296 chr2L 10592823 10592851 chr2L 10600535 10600563 opus 6 7712 3.5 6.0 4.8 1.0 7740 chr2L 10592823 intron Trim9 + chr2L 10596693 intron Trim9 + chr2L 10600563 intron Trim9 + chr2L_6_10595001 chr2L_10595001 RAL-371_125b 297 chr2L 10604149 10604215 chr2L 10604283 10604367 9 146 5.0 1.0 3.0 2.2 218 chr2L 10604149 intron Trim9 + chr2L 10604258 intron Trim9 + chr2L 10604367 intron Trim9 + chr2L_9_10600001 chr2L_10600001 RAL-371_125b 298 chr2L 10631159 10631227 chr2L 10631341 10631415 9 183 3.5 0.0 1.8 3.2 256 chr2L 10631159 intron CG7329 - chr2L 10631287 intron CG7329 - chr2L 10631415 intron CG7329 - chr2L_9_10630001 chr2L_10630001 RAL-371_125b 299 chr2L 10633305 10633372 chr2L 10633443 10633498 9 126 5.0 2.5 3.8 1.9 193 chr2L 10633305 intron CG7329 - chr2L 10633402 intron CG7329 - chr2L 10633498 intron CG7329 - chr2L_9_10630001 chr2L_10630001 RAL-371_125b 300 chr2L 10634730 10634785 chr2L 10634860 10634915 10 130 2.5 3.0 2.8 2.6 185 chr2L 10634730 intron CG7329 - chr2L 10634822 intron CG7329 - chr2L 10634915 intron CG7329 - chr2L_10_10630001 chr2L_10630001 RAL-371_125b 301 chr2L 10673697 10673768 chr2L 10673828 10673900 14 132 2.5 4.0 3.2 3.3 203 chr2L 10673697 intergenic not near genes chr2L 10673798 intergenic not near genes chr2L 10673900 intergenic not near genes chr2L_14_10670001 chr2L_10670001 RAL-371_125b 302 chr2L 10678996 10679026 chr2L 10679135 10679164 6 139 5.5 6.0 5.8 0.9 168 chr2L 10678996 exon CG17104 + chr2L 10679080 exon CG17104 + chr2L 10679164 exon CG17104 + chr2L_6_10675001 chr2L_10675001 RAL-371_125b 303 chr2L 10685547 10685594 chr2L 10685680 10685727 5 133 7.0 2.0 4.5 0.9 180 chr2L 10685547 intergenic not near genes chr2L 10685637 intergenic CG7296 - chr2L 10685727 intergenic CG7296 - chr2L_5_10685001 chr2L_10685001 RAL-371_125b 304 chr2L 10692750 10692817 chr2L 10692898 10692925 12 145 5.0 4.5 4.8 2.1 175 chr2L 10692750 intergenic CG17108 - chr2L 10692838 intergenic CG17108 - chr2L 10692925 intergenic CG17108 - chr2L_12_10690001 chr2L_10690001 RAL-371_125b 305 chr2L 10698078 10698156 chr2L 10698211 10698289 13 132 2.0 1.5 1.8 4.6 211 chr2L 10698078 5` UTR CR44181 + chr2L 10698184 5` UTR CR44181 + chr2L 10698289 intergenic CR44181 +,CG7300 - chr2L_13_10695001 chr2L_10695001 RAL-371_125b 306 chr2L 10698522 10698596 chr2L 10698655 10698739 5 139 0.0 2.0 1.0 2.5 217 chr2L 10698522 intergenic CR44181 +,CG7300 - chr2L 10698630 intergenic CR44181 + chr2L 10698739 intergenic not near genes chr2L_5_10695001 chr2L_10695001 RAL-371_125b 307 chr2L 10704873 10704938 chr2L 10705018 10705083 4 145 1.5 3.0 2.2 1.2 210 chr2L 10704873 intron,exon Lip2 -,CG6415 + chr2L 10704978 intron Lip2 - chr2L 10705083 exon Lip2 - chr2L_4_10700001 chr2L_10700001 RAL-371_125b 308 chr2L 10721244 10721267 chr2L 10721373 10721396 4 129 3.0 1.5 2.2 1.2 152 chr2L 10721244 intergenic not near genes chr2L 10721320 intergenic not near genes chr2L 10721396 intergenic not near genes chr2L_4_10720001 chr2L_10720001 RAL-371_125b 309 chr2L 10787943 10788029 chr2L 10788086 10788155 6 134 1.5 6.5 4.0 1.2 212 chr2L 10787943 intron CG31869 - chr2L 10788049 intron CG31869 - chr2L 10788155 intron CG31869 - chr2L_6_10785001 chr2L_10785001 RAL-371_125b 310 chr2L 10836697 10836770 chr2L 10836838 10836899 5 134 0.0 4.0 2.0 1.7 202 chr2L 10836697 intron Nos - chr2L 10836798 intron Nos - chr2L 10836899 intron Nos - chr2L_5_10835001 chr2L_10835001 RAL-371_125b 311 chr2L 10847032 10847095 chr2L 10847161 10847211 10 127 6.0 2.5 4.2 1.9 179 chr2L 10847032 5` UTR Porin2 - chr2L 10847122 intergenic Porin2 -,porin - chr2L 10847211 intergenic Porin2 -,porin - chr2L_10_10845001 chr2L_10845001 RAL-371_125b 312 chr2L 10850914 10850986 chr2L 10851044 10851117 13 129 4.5 0.5 2.5 3.7 203 chr2L 10850914 intron CG43129 + chr2L 10851016 intron CG43129 + chr2L 10851117 intron CG43129 + chr2L_13_10850001 chr2L_10850001 RAL-371_125b 313 chr2L 10909863 10909920 chr2L 10910041 10910098 13 177 6.5 5.5 6.0 1.9 235 chr2L 10909863 intergenic CG14069 - chr2L 10909980 intergenic CG14069 - chr2L 10910098 3` UTR CG14069 - chr2L_13_10905001 chr2L_10905001 RAL-371_125b 314 chr2L 10912980 10913001 chr2L 10913065 10913130 6 122 3.0 8.5 5.8 0.9 150 chr2L 10912980 intergenic not near genes chr2L 10913055 intergenic not near genes chr2L 10913130 intergenic not near genes chr2L_6_10910001 chr2L_10910001 RAL-371_125b 315 chr2L 10916500 10916556 chr2L 10916656 10916707 14 168 3.5 4.0 3.8 2.9 207 chr2L 10916500 intergenic not near genes chr2L 10916604 intergenic dpr2 - chr2L 10916707 intergenic dpr2 - chr2L_14_10915001 chr2L_10915001 RAL-371_125b 316 chr2L 10946939 10946968 chr2L 10956204 10956227 roo 8 9260 3.0 6.5 4.8 1.4 9288 chr2L 10946939 intron dpr2 - chr2L 10951583 intron dpr2 - chr2L 10956227 intron dpr2 - chr2L_8_10950001 chr2L_10950001 RAL-371_125b 317 chr2L 11025413 11025462 chr2L 11025724 11025773 9 301 3.0 6.0 4.5 1.6 360 chr2L 11025413 intron Samuel - chr2L 11025593 intron Samuel - chr2L 11025773 intron Samuel - chr2L_9_11025001 chr2L_11025001 RAL-371_125b 318 chr2L 11083107 11083156 chr2L 11083234 11083273 8 126 3.0 5.0 4.0 1.6 166 chr2L 11083107 intergenic AstCC - chr2L 11083190 intergenic AstCC - chr2L 11083273 intergenic AstCC - chr2L_8_11080001 chr2L_11080001 RAL-371_125b 319 chr2L 11198491 11198518 chr2L 11198624 11198651 5 133 0.0 7.5 3.8 1.0 160 chr2L 11198491 intron Ca-beta - chr2L 11198571 intron Ca-beta - chr2L 11198651 intron Ca-beta - chr2L_5_11195001 chr2L_11195001 RAL-371_125b 320 chr2L 11224020 11224074 chr2L 11224181 11224235 17 161 7.0 3.5 5.2 2.7 215 chr2L 11224020 intron ab + chr2L 11224128 intron ab + chr2L 11224235 intron ab + chr2L_17_11220001 chr2L_11220001 RAL-371_125b 321 chr2L 11245215 11245268 chr2L 11245344 11245396 9 129 2.0 3.5 2.8 2.4 181 chr2L 11245215 intron ab + chr2L 11245306 intron ab + chr2L 11245396 intron ab + chr2L_9_11245001 chr2L_11245001 RAL-371_125b 322 chr2L 11292332 11292402 chr2L 11292463 11292534 13 131 3.5 3.5 3.5 2.9 202 chr2L 11292332 intergenic not near genes chr2L 11292433 intergenic not near genes chr2L 11292534 intergenic not near genes chr2L_13_11290001 chr2L_11290001 RAL-371_125b 323 chr2L 11298776 11298844 chr2L 11298903 11298971 11 127 1.5 0.0 0.8 6.1 195 chr2L 11298776 intergenic not near genes chr2L 11298874 intergenic not near genes chr2L 11298971 intergenic not near genes chr2L_11_11295001 chr2L_11295001 RAL-371_125b 324 chr2L 11312295 11312363 chr2L 11312428 11312441 8 125 3.5 2.5 3.0 2.0 146 chr2L 11312295 intergenic not near genes chr2L 11312368 intergenic not near genes chr2L 11312441 intergenic not near genes chr2L_8_11310001 chr2L_11310001 RAL-371_125b 325 chr2L 11313065 11313128 chr2L 11313194 11313253 9 125 2.5 6.0 4.2 1.7 188 chr2L 11313065 intergenic not near genes chr2L 11313159 intergenic not near genes chr2L 11313253 intergenic not near genes chr2L_9_11310001 chr2L_11310001 RAL-371_125b 326 chr2L 11315225 11315270 chr2L 11317679 11317719 G2 7 2453 4.5 1.0 2.8 1.8 2494 chr2L 11315225 intergenic not near genes chr2L 11316472 intergenic not near genes chr2L 11317719 intergenic not near genes chr2L_7_11315001 chr2L_11315001 RAL-371_125b 327 chr2L 11395001 11395041 chr2L 11395133 11395173 13 132 5.0 3.0 4.0 2.6 172 chr2L 11395001 intergenic not near genes chr2L 11395087 intergenic not near genes chr2L 11395173 intergenic not near genes chr2L_13_11395001 chr2L_11395001 RAL-371_125b 328 chr2L 11404765 11404797 chr2L 11404891 11404923 7 126 3.5 3.0 3.2 1.7 158 chr2L 11404765 intergenic not near genes chr2L 11404844 intergenic not near genes chr2L 11404923 intergenic not near genes chr2L_7_11400001 chr2L_11400001 RAL-371_125b 329 chr2L 11418604 11418680 chr2L 11418733 11418789 14 126 2.5 4.5 3.5 3.1 185 chr2L 11418604 intergenic not near genes chr2L 11418696 intergenic not near genes chr2L 11418789 intergenic not near genes chr2L_14_11415001 chr2L_11415001 RAL-371_125b 330 chr2L 11455530 11455593 chr2L 11455665 11455722 7 132 3.0 5.0 4.0 1.4 192 chr2L 11455530 intergenic not near genes chr2L 11455626 intergenic not near genes chr2L 11455722 intergenic not near genes chr2L_7_11455001 chr2L_11455001 RAL-371_125b 331 chr2L 11491113 11491156 chr2L 11491220 11491267 10 120 3.0 2.5 2.8 2.6 154 chr2L 11491113 intergenic not near genes chr2L 11491190 intergenic not near genes chr2L 11491267 intergenic not near genes chr2L_10_11490001 chr2L_11490001 RAL-371_125b 332 chr2L 11540540 11540604 chr2L 11547995 11548056 Tabor 7 7454 2.5 3.0 2.8 1.8 7516 chr2L 11540540 intergenic not near genes chr2L 11544298 intergenic not near genes chr2L 11548056 intergenic not near genes chr2L_7_11540001 chr2L_11540001 RAL-371_125b 333 chr2L 11563596 11563657 chr2L 11568850 11568911 copia 5 5249 5.0 3.0 4.0 1.0 5315 chr2L 11563596 intergenic not near genes chr2L 11566254 intergenic not near genes chr2L 11568911 intergenic not near genes chr2L_5_11565001 chr2L_11565001 RAL-371_125b 334 chr2L 11614024 11614076 chr2L 11615560 11615581 hopper2 6 1533 5.5 7.5 6.5 0.8 1557 chr2L 11614024 intron kek2 + chr2L 11614802 intron kek2 + chr2L 11615581 intron kek2 + chr2L_6_11610001 chr2L_11610001 RAL-371_125b 335 chr2L 11665818 11665835 chr2L 11665946 11665963 4 128 0.0 7.0 3.5 0.9 145 chr2L 11665818 intergenic CR44481 + chr2L 11665890 intergenic CR44481 + chr2L 11665963 intergenic CR44481 + chr2L_4_11665001 chr2L_11665001 RAL-371_125b 336 chr2L 11672101 11672167 chr2L 11672258 11672324 15 156 4.0 2.0 3.0 3.8 223 chr2L 11672101 intergenic not near genes chr2L 11672212 intergenic not near genes chr2L 11672324 intergenic not near genes chr2L_15_11670001 chr2L_11670001 RAL-371_125b 337 chr2L 11713476 11713520 chr2L 11720992 11721028 blood 7 7508 2.5 2.5 2.5 2.0 7552 chr2L 11713476 intergenic not near genes chr2L 11717252 intergenic not near genes chr2L 11721028 intergenic CR44143 + chr2L_7_11715001 chr2L_11715001 RAL-371_125b 338 chr2L 11750297 11750342 chr2L 11750633 11750678 9 336 3.5 5.0 4.2 1.7 381 chr2L 11750297 intergenic not near genes chr2L 11750488 intergenic not near genes chr2L 11750678 intergenic not near genes chr2L_9_11750001 chr2L_11750001 RAL-371_125b 339 chr2L 11770560 11770628 chr2L 11770691 11770765 13 136 1.5 3.0 2.2 4.1 205 chr2L 11770560 intergenic not near genes chr2L 11770662 intergenic not near genes chr2L 11770765 intergenic not near genes chr2L_13_11770001 chr2L_11770001 RAL-371_125b 340 chr2L 11781038 11781168 chr2L 11781172 11781294 5 130 0.0 0.0 0.0 5.0 256 chr2L 11781038 intergenic not near genes chr2L 11781166 intergenic not near genes chr2L 11781294 intergenic not near genes chr2L_5_11780001 chr2L_11780001 RAL-371_125b 341 chr2L 11866958 11866996 chr2L 11867120 11867158 12 162 3.5 3.5 3.5 2.7 200 chr2L 11866958 intron Pde1c - chr2L 11867058 intron Pde1c - chr2L 11867158 intron Pde1c - chr2L_12_11865001 chr2L_11865001 RAL-371_125b 342 chr2L 11870945 11870972 chr2L 11871073 11871100 4 128 1.5 3.5 2.5 1.1 155 chr2L 11870945 intron Pde1c - chr2L 11871022 intron Pde1c - chr2L 11871100 intron Pde1c - chr2L_4_11870001 chr2L_11870001 RAL-371_125b 343 chr2L 11875631 11875697 chr2L 11875760 11875826 14 125 4.0 4.0 4.0 2.8 195 chr2L 11875631 intron Pde1c - chr2L 11875728 intron Pde1c - chr2L 11875826 intron Pde1c - chr2L_14_11875001 chr2L_11875001 RAL-371_125b 344 chr2L 11892505 11892549 chr2L 11892644 11892688 10 139 3.5 2.5 3.0 2.5 183 chr2L 11892505 intron Pde1c - chr2L 11892596 intron Pde1c - chr2L 11892688 intron Pde1c - chr2L_10_11890001 chr2L_11890001 RAL-371_125b 345 chr2L 12067291 12067347 chr2L 12074393 12074449 297 11 7102 4.5 5.0 4.8 1.9 7158 chr2L 12067291 intergenic not near genes chr2L 12070870 intergenic not near genes chr2L 12074449 intergenic not near genes chr2L_11_12070001 chr2L_12070001 RAL-371_125b 346 chr2L 12132700 12132720 chr2L 12132836 12132856 5 136 0.5 4.5 2.5 1.4 156 chr2L 12132700 intron rho-6 - chr2L 12132778 intron rho-6 - chr2L 12132856 intron rho-6 - chr2L_5_12130001 chr2L_12130001 RAL-371_125b 347 chr2L 12188215 12188284 chr2L 12188342 12188405 6 127 2.5 2.0 2.2 1.9 190 chr2L 12188215 intron aret + chr2L 12188310 intron aret + chr2L 12188405 intron aret + chr2L_6_12185001 chr2L_12185001 RAL-371_125b 348 chr2L 12191317 12191373 chr2L 12191448 12191504 9 131 2.0 1.0 1.5 3.6 187 chr2L 12191317 intron aret + chr2L 12191410 intron aret + chr2L 12191504 intron aret + chr2L_9_12190001 chr2L_12190001 RAL-371_125b 349 chr2L 12306362 12306399 chr2L 12306487 12306500 4 127 4.0 5.0 4.5 0.7 138 chr2L 12306362 intron aret + chr2L 12306431 intron aret + chr2L 12306500 intron aret + chr2L_4_12305001 chr2L_12305001 RAL-371_125b 350 chr2L 12318829 12318902 chr2L 12318988 12319061 11 156 2.0 4.5 3.2 2.6 232 chr2L 12318829 intergenic not near genes chr2L 12318945 intergenic not near genes chr2L 12319061 intergenic not near genes chr2L_11_12315001 chr2L_12315001 RAL-371_125b 351 chr2L 12394915 12394995 chr2L 12395059 12395157 10 160 2.5 0.0 1.2 4.5 242 chr2L 12394915 intron bru-2 + chr2L 12395036 intron bru-2 + chr2L 12395157 intron bru-2 + chr2L_10_12395001 chr2L_12395001 RAL-371_125b 352 chr2L 12399361 12399397 chr2L 12399488 12399503 4 122 6.5 3.5 5.0 0.7 142 chr2L 12399361 exon Pkd2 + chr2L 12399432 exon Pkd2 + chr2L 12399503 exon Pkd2 + chr2L_4_12395001 chr2L_12395001 RAL-371_125b 353 chr2L 12410962 12411010 chr2L 12411091 12411139 8 129 5.0 0.0 2.5 2.3 177 chr2L 12410962 intron vir-1 - chr2L 12411050 intron vir-1 - chr2L 12411139 intron vir-1 - chr2L_8_12410001 chr2L_12410001 RAL-371_125b 354 chr2L 12468439 12468508 chr2L 12468718 12468787 10 279 2.0 1.0 1.5 4.0 348 chr2L 12468439 intron bun - chr2L 12468613 intron bun - chr2L 12468787 intron bun - chr2L_10_12465001 chr2L_12465001 RAL-371_125b 355 chr2L 12487843 12487911 chr2L 12487974 12488042 12 127 5.5 8.0 6.8 1.5 199 chr2L 12487843 intron bun - chr2L 12487942 intron bun - chr2L 12488042 intron bun - chr2L_12_12485001 chr2L_12485001 RAL-371_125b 356 chr2L 12499001 12499016 chr2L 12499128 12499143 4 127 0.0 3.5 1.8 1.4 142 chr2L 12499001 intron bun - chr2L 12499072 intron bun - chr2L 12499143 intron bun - chr2L_4_12495001 chr2L_12495001 RAL-371_125b 357 chr2L 12500578 12500610 chr2L 12500697 12500736 6 124 3.0 5.5 4.2 1.2 158 chr2L 12500578 intron bun - chr2L 12500657 intron bun - chr2L 12500736 intron bun - chr2L_6_12500001 chr2L_12500001 RAL-371_125b 358 chr2L 12529202 12529377 chr2L 12529385 12529503 11 178 0.0 0.0 0.0 11.0 301 chr2L 12529202 intron bun - chr2L 12529352 intron bun - chr2L 12529503 intron bun - chr2L_11_12525001 chr2L_12525001 RAL-371_125b 359 chr2L 12570304 12570372 chr2L 12570435 12570511 14 138 2.0 0.0 1.0 7.0 207 chr2L 12570304 intergenic CR44598 - chr2L 12570408 intergenic CR44598 - chr2L 12570511 intergenic CR44598 - chr2L_14_12570001 chr2L_12570001 RAL-371_125b 360 chr2L 12598155 12598199 chr2L 12598282 12598326 14 127 4.5 2.0 3.2 3.3 171 chr2L 12598155 intron nub + chr2L 12598240 intron nub + chr2L 12598326 intron nub + chr2L_14_12595001 chr2L_12595001 RAL-371_125b 361 chr2L 12619853 12619898 chr2L 12619979 12620024 7 126 7.0 3.0 5.0 1.2 171 chr2L 12619853 intron,intron nub +,Ref2 - chr2L 12619938 intron,intron nub +,Ref2 - chr2L 12620024 intron,intron nub +,Ref2 - chr2L_7_12615001 chr2L_12615001 RAL-371_125b 362 chr2L 12693802 12693866 chr2L 12693929 12693993 6 127 3.0 8.5 5.8 0.9 191 chr2L 12693802 exon CG6153 + chr2L 12693898 3` UTR,3` UTR CG6153 +,CG5780 - chr2L 12693993 exon CG5780 - chr2L_6_12690001 chr2L_12690001 RAL-371_125b 363 chr2L 12731019 12731083 chr2L 12735836 12735895 F-element 11 4816 5.0 4.0 4.5 2.0 4876 chr2L 12731019 intron MRP + chr2L 12733457 intron MRP + chr2L 12735895 intron MRP + chr2L_11_12730001 chr2L_12730001 RAL-371_125b 364 chr2L 12739130 12739196 chr2L 12743961 12744027 Doc 12 4831 5.5 5.0 5.2 1.9 4897 chr2L 12739130 exon MRP + chr2L 12741578 intron MRP + chr2L 12744027 exon MRP + chr2L_12_12740001 chr2L_12740001 RAL-371_125b 365 chr2L 12751269 12751336 chr2L 12751401 12751469 9 129 3.5 1.5 2.5 2.6 200 chr2L 12751269 intergenic not near genes chr2L 12751369 intergenic not near genes chr2L 12751469 intergenic not near genes chr2L_9_12750001 chr2L_12750001 RAL-371_125b 366 chr2L 12759185 12759232 chr2L 12759328 12759377 14 142 2.0 5.0 3.5 3.1 192 chr2L 12759185 intergenic not near genes chr2L 12759281 intergenic not near genes chr2L 12759377 intergenic not near genes chr2L_14_12755001 chr2L_12755001 RAL-371_125b 367 chr2L 12763781 12763811 chr2L 12764043 12764073 BS 6 262 4.0 0.0 2.0 2.0 292 chr2L 12763781 intergenic not near genes chr2L 12763927 intergenic not near genes chr2L 12764073 intergenic not near genes chr2L_6_12760001 chr2L_12760001 RAL-371_125b 368 chr2L 12791574 12791606 chr2L 12795299 12795331 F-element 6 3722 7.0 4.0 5.5 0.9 3757 chr2L 12791574 intergenic not near genes chr2L 12793452 intergenic not near genes chr2L 12795331 intergenic not near genes chr2L_6_12790001 chr2L_12790001 RAL-371_125b 369 chr2L 12791611 12791625 chr2L 12795295 12795330 F-element 7 3710 6.0 4.0 5.0 1.2 3719 chr2L 12791611 intergenic not near genes chr2L 12793470 intergenic not near genes chr2L 12795330 intergenic not near genes chr2L_7_12790001 chr2L_12790001 RAL-371_125b 370 chr2L 12807389 12807467 chr2L 12807521 12807599 7 131 3.0 1.0 2.0 2.3 210 chr2L 12807389 intergenic CR43818 - chr2L 12807494 intergenic CR43818 - chr2L 12807599 intergenic CR43818 - chr2L_7_12805001 chr2L_12805001 RAL-371_125b 371 chr2L 12848376 12848460 chr2L 12848518 12848598 18 140 4.5 0.5 2.5 5.1 222 chr2L 12848376 intergenic not near genes chr2L 12848487 intergenic not near genes chr2L 12848598 intergenic not near genes chr2L_18_12845001 chr2L_12845001 RAL-371_125b 372 chr2L 12855300 12855315 chr2L 12855435 12855445 5 134 0.0 6.0 3.0 1.2 145 chr2L 12855300 intergenic not near genes chr2L 12855372 intergenic not near genes chr2L 12855445 intergenic not near genes chr2L_5_12855001 chr2L_12855001 RAL-371_125b 373 chr2L 12861654 12861720 chr2L 12863171 12863237 hobo 13 1515 4.5 2.5 3.5 2.9 1583 chr2L 12861654 intergenic not near genes chr2L 12862446 intergenic not near genes chr2L 12863237 intergenic not near genes chr2L_13_12860001 chr2L_12860001 RAL-371_125b 374 chr2L 12893984 12894050 chr2L 12895501 12895501 hobo 9 1506 3.0 6.0 4.5 1.6 1517 chr2L 12893984 intergenic not near genes chr2L 12894742 intergenic not near genes chr2L 12895501 intergenic not near genes chr2L_9_12890001 chr2L_12890001 RAL-371_125b 375 chr2L 12905425 12905484 chr2L 12905559 12905618 5 134 5.0 3.5 4.2 1.0 193 chr2L 12905425 intergenic not near genes chr2L 12905522 intergenic not near genes chr2L 12905618 intergenic not near genes chr2L_5_12905001 chr2L_12905001 RAL-371_125b 376 chr2L 12933815 12933875 chr2L 12941332 12941392 blood 16 7514 4.5 5.5 5.0 2.7 7577 chr2L 12933815 intergenic not near genes chr2L 12937604 intergenic not near genes chr2L 12941392 intergenic not near genes chr2L_16_12935001 chr2L_12935001 RAL-371_125b 377 chr2L 12945929 12945989 chr2L 12946059 12946119 13 129 2.5 3.0 2.8 3.4 190 chr2L 12945929 intergenic not near genes chr2L 12946024 intergenic not near genes chr2L 12946119 intergenic not near genes chr2L_13_12945001 chr2L_12945001 RAL-371_125b 378 chr2L 13035415 13035490 chr2L 13035675 13035734 14 258 2.5 5.5 4.0 2.8 319 chr2L 13035415 intron CG9932 - chr2L 13035574 intron CG9932 - chr2L 13035734 intron CG9932 - chr2L_14_13035001 chr2L_13035001 RAL-371_125b 379 chr2L 13069230 13069300 chr2L 13069401 13069451 10 168 1.0 1.0 1.0 5.0 221 chr2L 13069230 intergenic not near genes chr2L 13069340 intergenic not near genes chr2L 13069451 intergenic not near genes chr2L_10_13065001 chr2L_13065001 RAL-371_125b 380 chr2L 13109410 13109472 chr2L 13109588 13109650 15 178 1.5 3.0 2.2 4.7 240 chr2L 13109410 3` UTR CG5142 + chr2L 13109530 intergenic CG5142 + chr2L 13109650 intergenic CG5142 + chr2L_15_13105001 chr2L_13105001 RAL-371_125b 381 chr2L 13154061 13154122 chr2L 13154189 13154261 5 132 4.5 0.0 2.2 1.6 200 chr2L 13154061 intergenic not near genes chr2L 13154161 intergenic not near genes chr2L 13154261 intergenic not near genes chr2L_5_13150001 chr2L_13150001 RAL-371_125b 382 chr2L 13159294 13159357 chr2L 13159421 13159467 17 125 1.0 9.5 5.2 2.7 173 chr2L 13159294 exon Pk34A + chr2L 13159380 exon Pk34A + chr2L 13159467 exon Pk34A + chr2L_17_13155001 chr2L_13155001 RAL-371_125b 383 chr2L 13266338 13266404 chr2L 13266476 13266519 15 136 0.0 7.0 3.5 3.3 181 chr2L 13266338 intron CG44085 + chr2L 13266428 intron CG44085 + chr2L 13266519 intron CG44085 + chr2L_15_13265001 chr2L_13265001 RAL-371_125b 384 chr2L 13304555 13304608 chr2L 13304689 13304742 7 130 2.5 3.0 2.8 1.8 187 chr2L 13304555 3` UTR CG43778 - chr2L 13304648 3` UTR CG43778 - chr2L 13304742 3` UTR CG43778 - chr2L_7_13300001 chr2L_13300001 RAL-371_125b 385 chr2L 13405627 13405661 chr2L 13410473 13410508 Doc 7 4847 4.0 12.5 8.2 0.8 4881 chr2L 13405627 exon CG7110 + chr2L 13408068 intron CG7110 + chr2L 13410508 exon CG7110 + chr2L_7_13405001 chr2L_13405001 RAL-371_125b 386 chr2L 13449422 13449469 chr2L 13456908 13456955 Quasimodo 8 7486 3.5 3.5 3.5 1.8 7533 chr2L 13449422 intron,intron CG42784 +,Hsp60D - chr2L 13453188 intron CG42784 + chr2L 13456955 intron CG42784 + chr2L_8_13450001 chr2L_13450001 RAL-371_125b 387 chr2L 13481421 13481461 chr2L 13482078 13482118 jockey 11 652 7.0 6.0 6.5 1.5 697 chr2L 13481421 intron CG42784 + chr2L 13481770 intron CG42784 + chr2L 13482118 intron CG42784 + chr2L_11_13480001 chr2L_13480001 RAL-371_125b 388 chr2L 13522255 13522273 chr2L 13527611 13527629 Transpac 5 5356 0.0 7.5 3.8 1.0 5374 chr2L 13522255 intron B4 - chr2L 13524942 intron B4 - chr2L 13527629 intron B4 - chr2L_5_13520001 chr2L_13520001 RAL-371_125b 389 chr2L 13540635 13540692 chr2L 13540764 13540821 8 129 3.5 3.5 3.5 1.8 186 chr2L 13540635 intron B4 - chr2L 13540728 intron B4 - chr2L 13540821 intron,exon B4 -,CG16852 + chr2L_8_13540001 chr2L_13540001 RAL-371_125b 390 chr2L 13543917 13543968 chr2L 13544045 13544076 6 124 6.0 2.0 4.0 1.2 159 chr2L 13543917 intron B4 - chr2L 13543996 intron B4 - chr2L 13544076 intron B4 - chr2L_6_13540001 chr2L_13540001 RAL-371_125b 391 chr2L 13549125 13549161 chr2L 13549253 13549278 5 122 7.5 5.5 6.5 0.7 153 chr2L 13549125 intron B4 - chr2L 13549202 5` UTR B4 - chr2L 13549278 5` UTR B4 - chr2L_5_13545001 chr2L_13545001 RAL-371_125b 392 chr2L 13549167 13549177 chr2L 13549277 13549304 4 116 6.0 6.0 6.0 0.6 137 chr2L 13549167 5` UTR B4 - chr2L 13549236 5` UTR B4 - chr2L 13549304 5` UTR B4 - chr2L_4_13545001 chr2L_13545001 RAL-371_125b 393 chr2L 13560366 13560418 chr2L 13565237 13565289 F-element 9 4871 6.5 7.0 6.8 1.2 4923 chr2L 13560366 intron kuz + chr2L 13562828 intron kuz + chr2L 13565289 intron kuz + chr2L_9_13560001 chr2L_13560001 RAL-371_125b 394 chr2L 13676289 13676354 chr2L 13676445 13676510 11 154 2.0 6.0 4.0 2.2 221 chr2L 13676289 intergenic not near genes chr2L 13676400 intergenic CG31814 - chr2L 13676510 intergenic CG31814 - chr2L_11_13675001 chr2L_13675001 RAL-371_125b 395 chr2L 13761785 13761825 chr2L 13762921 13762986 Doc 9 1156 5.0 4.5 4.8 1.6 1201 chr2L 13761785 intron TM9SF4 + chr2L 13762386 intron TM9SF4 + chr2L 13762986 intron TM9SF4 + chr2L_9_13760001 chr2L_13760001 RAL-371_125b 396 chr2L 13800137 13800190 chr2L 13800291 13800344 11 154 1.5 3.0 2.2 3.4 207 chr2L 13800137 intergenic Sec71 + chr2L 13800240 intergenic not near genes chr2L 13800344 intergenic not near genes chr2L_11_13800001 chr2L_13800001 RAL-371_125b 397 chr2L 13853046 13853115 chr2L 13862246 13862318 roo 11 9198 4.5 0.0 2.2 3.4 9272 chr2L 13853046 intron CenG1A + chr2L 13857682 intron CenG1A + chr2L 13862318 intron CenG1A + chr2L_11_13855001 chr2L_13855001 RAL-371_125b 398 chr2L 13882559 13882590 chr2L 13882702 13882733 6 143 1.0 4.5 2.8 1.6 174 chr2L 13882559 intron CenG1A + chr2L 13882646 intron CenG1A + chr2L 13882733 intron CenG1A + chr2L_6_13880001 chr2L_13880001 RAL-371_125b 399 chr2L 13918782 13918833 chr2L 13918919 13918970 9 137 2.5 0.5 1.5 3.6 188 chr2L 13918782 intron Ance-3 + chr2L 13918876 intron Ance-3 + chr2L 13918970 intron Ance-3 + chr2L_9_13915001 chr2L_13915001 RAL-371_125b 400 chr2L 13944357 13944420 chr2L 13944527 13944590 5 170 1.5 3.0 2.2 1.6 233 chr2L 13944357 intron Ance-3 + chr2L 13944474 intron Ance-3 + chr2L 13944590 intron Ance-3 + chr2L_5_13940001 chr2L_13940001 RAL-371_125b 401 chr2L 13953961 13954011 chr2L 13954137 13954187 6 176 1.5 3.0 2.2 1.9 226 chr2L 13953961 intron Ance-3 + chr2L 13954074 intron Ance-3 + chr2L 13954187 intron Ance-3 + chr2L_6_13950001 chr2L_13950001 RAL-371_125b 402 chr2L 14029184 14029245 chr2L 14029315 14029376 16 131 3.5 3.0 3.2 3.8 192 chr2L 14029184 exon CG4500 + chr2L 14029280 3` UTR,3` UTR CG4500 +,CG18095 - chr2L 14029376 3` UTR CG18095 - chr2L_16_14025001 chr2L_14025001 RAL-371_125b 403 chr2L 14298896 14298946 chr2L 14299034 14299084 8 137 8.0 8.0 8.0 0.9 188 chr2L 14298896 intron wb + chr2L 14298990 intron wb + chr2L 14299084 intron wb + chr2L_8_14295001 chr2L_14295001 RAL-371_125b 404 chr2L 14333866 14333908 chr2L 14334015 14334058 4 148 2.0 2.5 2.2 1.2 192 chr2L 14333866 intergenic ms(2)34Fe +,CG33090 + chr2L 14333962 intergenic ms(2)34Fe +,CG33090 + chr2L 14334058 intergenic CG33090 +,ms(2)34Fe + chr2L_4_14330001 chr2L_14330001 RAL-371_125b 405 chr2L 14396159 14396211 chr2L 14398965 14399017 12 2805 22.0 14.0 18.0 0.6 2858 chr2L 14396159 intron elB - chr2L 14397588 intron elB - chr2L 14399017 intron elB - chr2L_12_14395001 chr2L_14395001 RAL-371_125b 406 chr2L 14396033 14396106 chr2L 14399100 14399165 14 3060 28.5 23.0 25.8 0.5 3132 chr2L 14396033 intron elB - chr2L 14397599 intron elB - chr2L 14399165 intron elB - chr2L_14_14395001 chr2L_14395001 RAL-371_125b 407 chr2L 14465362 14465416 chr2L 14465555 14465609 14 192 4.5 0.0 2.2 4.4 247 chr2L 14465362 intergenic not near genes chr2L 14465486 intergenic not near genes chr2L 14465609 intergenic not near genes chr2L_14_14465001 chr2L_14465001 RAL-371_125b 408 chr2L 14465552 14465615 chr2L 14469065 14469128 hopper2 8 3513 0.0 3.5 1.8 2.9 3576 chr2L 14465552 intergenic not near genes chr2L 14467340 intergenic not near genes chr2L 14469128 intergenic not near genes chr2L_8_14465001 chr2L_14465001 RAL-371_125b 409 chr2L 14503391 14503429 chr2L 14503520 14503558 4 126 2.5 1.5 2.0 1.3 167 chr2L 14503391 intergenic not near genes chr2L 14503474 intergenic not near genes chr2L 14503558 intergenic not near genes chr2L_4_14500001 chr2L_14500001 RAL-371_125b 410 chr2L 14549108 14549171 chr2L 14549228 14549297 14 125 5.5 3.0 4.2 2.7 189 chr2L 14549108 5` UTR CG4218 - chr2L 14549202 intergenic CG4218 - chr2L 14549297 intergenic CG4218 - chr2L_14_14545001 chr2L_14545001 RAL-371_125b 411 chr2L 14552569 14552607 chr2L 14552679 14552738 7 118 3.5 3.5 3.5 1.6 169 chr2L 14552569 intergenic not near genes chr2L 14552654 intergenic not near genes chr2L 14552738 intergenic not near genes chr2L_7_14550001 chr2L_14550001 RAL-371_125b 412 chr2L 14555107 14555148 chr2L 14555236 14555277 4 129 5.5 7.5 6.5 0.5 170 chr2L 14555107 intergenic not near genes chr2L 14555192 intergenic not near genes chr2L 14555277 intergenic not near genes chr2L_4_14555001 chr2L_14555001 RAL-371_125b 413 chr2L 14588347 14588409 chr2L 14588551 14588613 15 204 0.5 6.0 3.2 3.6 266 chr2L 14588347 intergenic CG42680 - chr2L 14588480 intergenic CG42680 - chr2L 14588613 intergenic CG42680 - chr2L_15_14585001 chr2L_14585001 RAL-371_125b 414 chr2L 14588650 14588670 chr2L 14588991 14589006 5 340 3.5 4.0 3.8 1.0 356 chr2L 14588650 intergenic CG42680 - chr2L 14588828 intergenic not near genes chr2L 14589006 intergenic not near genes chr2L_5_14585001 chr2L_14585001 RAL-371_125b 415 chr2L 14590150 14590198 chr2L 14590280 14590328 7 129 4.0 5.0 4.5 1.3 178 chr2L 14590150 intergenic not near genes chr2L 14590239 intergenic not near genes chr2L 14590328 intergenic not near genes chr2L_7_14590001 chr2L_14590001 RAL-371_125b 416 chr2L 14601926 14601999 chr2L 14602060 14602133 17 134 4.0 4.0 4.0 3.4 207 chr2L 14601926 exon osp - chr2L 14602030 intron osp - chr2L 14602133 exon osp - chr2L_17_14600001 chr2L_14600001 RAL-371_125b 417 chr2L 14618869 14618889 chr2L 14619300 14619320 jockey 7 430 3.5 2.5 3.0 1.8 451 chr2L 14618869 intron,3` UTR,3` UTR osp -,Adh +,Adhr + chr2L 14619094 intron osp - chr2L 14619320 intron osp - chr2L_7_14615001 chr2L_14615001 RAL-371_125b 418 chr2L 14629650 14629700 chr2L 14629965 14630007 5 313 0.0 4.0 2.0 1.7 357 chr2L 14629650 intron osp - chr2L 14629828 intron osp - chr2L 14630007 intron osp - chr2L_5_14625001 chr2L_14625001 RAL-371_125b 419 chr2L 14642539 14642593 chr2L 14651747 14651806 roo 8 9212 5.5 3.5 4.5 1.5 9267 chr2L 14642539 intron osp - chr2L 14647172 intron osp - chr2L 14651806 intron osp - chr2L_8_14645001 chr2L_14645001 RAL-371_125b 420 chr2L 14686643 14686664 chr2L 14686797 14686818 4 154 3.5 0.0 1.8 1.4 175 chr2L 14686643 intron osp - chr2L 14686730 intron osp - chr2L 14686818 intron osp - chr2L_4_14685001 chr2L_14685001 RAL-371_125b 421 chr2L 14707164 14707238 chr2L 14707333 14707338 17 164 7.0 0.0 3.5 3.8 174 chr2L 14707164 intergenic not near genes chr2L 14707251 intergenic not near genes chr2L 14707338 intergenic not near genes chr2L_17_14705001 chr2L_14705001 RAL-371_125b 422 chr2L 14707584 14707613 chr2L 14708639 14708668 4 1055 2.5 17.5 10.0 0.4 1084 chr2L 14707584 intergenic not near genes chr2L 14708126 intergenic not near genes chr2L 14708668 intergenic not near genes chr2L_4_14705001 chr2L_14705001 RAL-371_125b 423 chr2L 14706740 14706775 chr2L 14708952 14708993 10 2213 20.5 22.0 21.2 0.5 2253 chr2L 14706740 intergenic not near genes chr2L 14707866 intergenic not near genes chr2L 14708993 intergenic not near genes chr2L_10_14705001 chr2L_14705001 RAL-371_125b 424 chr2L 14726541 14726552 chr2L 14726673 14726684 4 132 5.0 3.5 4.2 0.8 143 chr2L 14726541 intron CG42685 - chr2L 14726612 intron CG42685 - chr2L 14726684 intron CG42685 - chr2L_4_14725001 chr2L_14725001 RAL-371_125b 425 chr2L 14747484 14747559 chr2L 14747621 14747696 12 132 4.0 3.0 3.5 2.7 212 chr2L 14747484 intergenic not near genes chr2L 14747590 intergenic not near genes chr2L 14747696 intergenic not near genes chr2L_12_14745001 chr2L_14745001 RAL-371_125b 426 chr2L 14768884 14768955 chr2L 14769012 14769083 6 128 0.0 2.5 1.2 2.7 199 chr2L 14768884 intergenic not near genes chr2L 14768984 intergenic not near genes chr2L 14769083 intergenic not near genes chr2L_6_14765001 chr2L_14765001 RAL-371_125b 427 chr2L 14802417 14802487 chr2L 14802562 14802620 4 139 0.0 1.0 0.5 2.7 203 chr2L 14802417 5` UTR CG33308 + chr2L 14802518 exon CG33308 + chr2L 14802620 exon CG33308 + chr2L_4_14800001 chr2L_14800001 RAL-371_125b 428 chr2L 14803845 14803902 chr2L 14809098 14809155 copia 10 5251 5.5 5.5 5.5 1.5 5310 chr2L 14803845 intergenic not near genes chr2L 14806500 intergenic not near genes chr2L 14809155 intergenic not near genes chr2L_10_14805001 chr2L_14805001 RAL-371_125b 429 chr2L 14839707 14839775 chr2L 14839833 14839901 15 126 1.5 2.5 2.0 5.0 194 chr2L 14839707 intergenic not near genes chr2L 14839804 intergenic not near genes chr2L 14839901 intergenic not near genes chr2L_15_14835001 chr2L_14835001 RAL-371_125b 430 chr2L 14840932 14841005 chr2L 14841070 14841142 8 138 2.5 6.5 4.5 1.5 210 chr2L 14840932 3` UTR CR43805 - chr2L 14841037 3` UTR CR43805 - chr2L 14841142 3` UTR CR43805 - chr2L_8_14840001 chr2L_14840001 RAL-371_125b 431 chr2L 14889908 14889922 chr2L 14890383 14890396 jockey 4 475 7.5 1.5 4.5 0.7 488 chr2L 14889908 intergenic not near genes chr2L 14890152 intergenic not near genes chr2L 14890396 intergenic not near genes chr2L_4_14890001 chr2L_14890001 RAL-371_125b 432 chr2L 14889933 14889961 chr2L 14890381 14890436 jockey 5 470 5.0 1.5 3.2 1.2 503 chr2L 14889933 intergenic not near genes chr2L 14890184 intergenic not near genes chr2L 14890436 intergenic not near genes chr2L_5_14890001 chr2L_14890001 RAL-371_125b 433 chr2L 14984339 14984399 chr2L 14991991 14992051 opus 9 7652 2.5 3.5 3.0 2.2 7712 chr2L 14984339 intron mol - chr2L 14988195 intron mol - chr2L 14992051 intron mol - chr2L_9_14985001 chr2L_14985001 RAL-371_125b 434 chr2L 15003501 15003568 chr2L 15003635 15003702 13 133 2.5 2.5 2.5 3.7 201 chr2L 15003501 intergenic not near genes chr2L 15003602 intergenic not near genes chr2L 15003702 intergenic not near genes chr2L_13_15000001 chr2L_15000001 RAL-371_125b 435 chr2L 15044671 15044724 chr2L 15044797 15044850 8 126 2.0 2.5 2.2 2.5 179 chr2L 15044671 intergenic ck - chr2L 15044760 intergenic ck - chr2L 15044850 intergenic ck - chr2L_8_15040001 chr2L_15040001 RAL-371_125b 436 chr2L 15061764 15061827 chr2L 15064029 15064092 13 2265 16.5 20.5 18.5 0.7 2328 chr2L 15061764 intron vas + chr2L 15062928 intron vas + chr2L 15064092 intron,3` UTR vas +,vig - chr2L_13_15060001 chr2L_15060001 RAL-371_125b 437 chr2L 15077855 15078101 chr2L 15077980 15078208 20 134 2.0 1.5 1.8 7.1 353 chr2L 15077855 intron CG15270 + chr2L 15078032 intron CG15270 + chr2L 15078208 intron CG15270 + chr2L_20_15075001 chr2L_15075001 RAL-371_125b 438 chr2L 15083893 15083971 chr2L 15084900 15084978 12 1007 1.0 1.0 1.0 6.0 1085 chr2L 15083893 intron CG15270 + chr2L 15084436 intron CG15270 + chr2L 15084978 intron CG15270 + chr2L_12_15080001 chr2L_15080001 RAL-371_125b 439 chr2L 15098504 15098539 chr2L 15098623 15098665 9 128 5.0 1.0 3.0 2.2 161 chr2L 15098504 intergenic not near genes chr2L 15098584 intergenic not near genes chr2L 15098665 intergenic not near genes chr2L_9_15095001 chr2L_15095001 RAL-371_125b 440 chr2L 15122729 15122805 chr2L 15122859 15122936 7 131 0.5 1.0 0.8 3.9 207 chr2L 15122729 intergenic not near genes chr2L 15122832 intergenic not near genes chr2L 15122936 intergenic not near genes chr2L_7_15120001 chr2L_15120001 RAL-371_125b 441 chr2L 15179469 15179539 chr2L 15179599 15179621 14 119 1.0 4.5 2.8 3.7 152 chr2L 15179469 intron CG4168 - chr2L 15179545 intron CG4168 - chr2L 15179621 intron CG4168 - chr2L_14_15175001 chr2L_15175001 RAL-371_125b 442 chr2L 15197476 15197503 chr2L 15197622 15197649 INE-1 8 146 0.0 8.5 4.2 1.5 173 chr2L 15197476 intron CG4168 - chr2L 15197562 intron CG4168 - chr2L 15197649 intron CG4168 - chr2L_8_15195001 chr2L_15195001 RAL-371_125b 443 chr2L 15226328 15226389 chr2L 15226454 15226507 5 120 2.0 0.5 1.2 2.3 179 chr2L 15226328 intergenic not near genes chr2L 15226418 intergenic not near genes chr2L 15226507 intergenic not near genes chr2L_5_15225001 chr2L_15225001 RAL-371_125b 444 chr2L 15227190 15227233 chr2L 15227316 15227348 11 123 2.0 4.0 3.0 2.8 158 chr2L 15227190 intergenic not near genes chr2L 15227269 intergenic not near genes chr2L 15227348 intergenic not near genes chr2L_11_15225001 chr2L_15225001 RAL-371_125b 445 chr2L 15244013 15244059 chr2L 15244176 15244222 4 163 0.5 2.5 1.5 1.6 209 chr2L 15244013 intron ZnT35C - chr2L 15244118 intron ZnT35C - chr2L 15244222 intron ZnT35C - chr2L_4_15240001 chr2L_15240001 RAL-371_125b 446 chr2L 15252950 15253007 chr2L 15253079 15253136 11 129 3.5 5.0 4.2 2.1 186 chr2L 15252950 intron dao + chr2L 15253043 intron dao + chr2L 15253136 intron dao + chr2L_11_15250001 chr2L_15250001 RAL-371_125b 447 chr2L 15309311 15309352 chr2L 15309464 15309505 11 153 3.5 1.5 2.5 3.1 194 chr2L 15309311 intergenic not near genes chr2L 15309408 intergenic not near genes chr2L 15309505 intergenic not near genes chr2L_11_15305001 chr2L_15305001 RAL-371_125b 448 chr2L 15375773 15375839 chr2L 15375935 15376001 5 162 2.5 1.5 2.0 1.7 228 chr2L 15375773 intergenic not near genes chr2L 15375887 intergenic not near genes chr2L 15376001 intergenic not near genes chr2L_5_15375001 chr2L_15375001 RAL-371_125b 449 chr2L 15397857 15397879 chr2L 15397998 15398020 5 141 2.0 1.5 1.8 1.8 163 chr2L 15397857 intergenic not near genes chr2L 15397938 intergenic not near genes chr2L 15398020 intergenic not near genes chr2L_5_15395001 chr2L_15395001 RAL-371_125b 450 chr2L 15446011 15446073 chr2L 15453530 15453574 blood 9 7516 0.5 0.5 0.5 6.0 7563 chr2L 15446011 intergenic not near genes chr2L 15449792 intergenic not near genes chr2L 15453574 intergenic not near genes chr2L_9_15445001 chr2L_15445001 RAL-371_125b 451 chr2L 15458231 15458257 chr2L 15458369 15458395 5 138 0.5 1.0 0.8 2.8 164 chr2L 15458231 intergenic not near genes chr2L 15458313 intergenic not near genes chr2L 15458395 intergenic not near genes chr2L_5_15455001 chr2L_15455001 RAL-371_125b 452 chr2L 15482586 15482593 chr2L 15482772 15482779 5 186 2.0 4.5 3.2 1.2 193 chr2L 15482586 intergenic not near genes chr2L 15482682 intergenic not near genes chr2L 15482779 intergenic not near genes chr2L_5_15480001 chr2L_15480001 RAL-371_125b 453 chr2L 15514284 15514327 chr2L 15514418 15514461 8 133 6.0 5.5 5.8 1.2 177 chr2L 15514284 intergenic not near genes chr2L 15514372 intergenic not near genes chr2L 15514461 intergenic not near genes chr2L_8_15510001 chr2L_15510001 RAL-371_125b 454 chr2L 15586374 15586428 chr2L 15593476 15593530 297 8 7101 2.0 4.0 3.0 2.0 7156 chr2L 15586374 intergenic not near genes chr2L 15589952 intergenic not near genes chr2L 15593530 intergenic not near genes chr2L_8_15585001 chr2L_15585001 RAL-371_125b 455 chr2L 15598747 15598767 chr2L 15598876 15598896 5 129 4.0 0.0 2.0 1.7 149 chr2L 15598747 intergenic not near genes chr2L 15598822 intergenic not near genes chr2L 15598896 intergenic not near genes chr2L_5_15595001 chr2L_15595001 RAL-371_125b 456 chr2L 15826849 15826883 chr2L 15829293 15829327 Tabor 6 2444 3.0 4.5 3.8 1.2 2478 chr2L 15826849 intergenic not near genes chr2L 15828088 intergenic not near genes chr2L 15829327 intergenic not near genes chr2L_6_15825001 chr2L_15825001 RAL-371_125b 457 chr2L 15915609 15915635 chr2L 15915737 15915763 5 126 8.5 4.5 6.5 0.7 154 chr2L 15915609 intron beat-Ib - chr2L 15915686 intron beat-Ib - chr2L 15915763 intron beat-Ib - chr2L_5_15915001 chr2L_15915001 RAL-371_125b 458 chr2L 15915636 15915675 chr2L 15915735 15915803 5 120 6.0 4.5 5.2 0.8 167 chr2L 15915636 intron beat-Ib - chr2L 15915720 intron beat-Ib - chr2L 15915803 intron beat-Ib - chr2L_5_15915001 chr2L_15915001 RAL-371_125b 459 chr2L 15944094 15944165 chr2L 15944285 15944356 18 191 2.0 2.0 2.0 6.0 262 chr2L 15944094 intron beat-Ib - chr2L 15944225 intron beat-Ib - chr2L 15944356 intron beat-Ib - chr2L_18_15940001 chr2L_15940001 RAL-371_125b 460 chr2L 15955984 15956043 chr2L 15957501 15957560 hobo 13 1516 5.5 4.5 5.0 2.2 1576 chr2L 15955984 intron beat-Ib - chr2L 15956772 intron beat-Ib - chr2L 15957560 intron beat-Ib - chr2L_13_15955001 chr2L_15955001 RAL-371_125b 461 chr2L 16012077 16012142 chr2L 16012207 16012259 4 127 2.5 4.5 3.5 0.9 182 chr2L 16012077 intron beat-Ic + chr2L 16012168 intron beat-Ic + chr2L 16012259 intron beat-Ic + chr2L_4_16010001 chr2L_16010001 RAL-371_125b 462 chr2L 16071769 16071771 chr2L 16217660 16217660 copia 9 145889 14.5 11.5 13.0 0.6 145891 chr2L 16071769 intron beat-Ia + chr2L 16144714 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_9_16140001 chr2L_16140001 RAL-371_125b 463 chr2L 16129174 16129229 chr2L 16129369 16129424 9 195 5.0 5.5 5.2 1.5 250 chr2L 16129174 intergenic not near genes chr2L 16129299 intergenic not near genes chr2L 16129424 intergenic not near genes chr2L_9_16125001 chr2L_16125001 RAL-371_125b 464 chr2L 16141133 16141180 chr2L 16146390 16146437 copia 7 5257 4.0 2.0 3.0 1.8 5304 chr2L 16141133 intergenic not near genes chr2L 16143785 intergenic not near genes chr2L 16146437 intergenic not near genes chr2L_7_16140001 chr2L_16140001 RAL-371_125b 465 chr2L 16153690 16153755 chr2L 16160794 16160859 297 10 7100 7.5 3.5 5.5 1.5 7169 chr2L 16153690 intergenic not near genes chr2L 16157274 intergenic not near genes chr2L 16160859 intergenic not near genes chr2L_10_16155001 chr2L_16155001 RAL-371_125b 466 chr2L 16163566 16163585 chr2L 16163692 16163711 4 126 2.5 1.5 2.0 1.3 145 chr2L 16163566 intergenic not near genes chr2L 16163638 intergenic not near genes chr2L 16163711 intergenic not near genes chr2L_4_16160001 chr2L_16160001 RAL-371_125b 467 chr2L 16186559 16186603 chr2L 16186759 16186803 7 200 4.5 2.5 3.5 1.6 244 chr2L 16186559 intron Ca-alpha1D + chr2L 16186681 intron Ca-alpha1D + chr2L 16186803 intron Ca-alpha1D + chr2L_7_16185001 chr2L_16185001 RAL-371_125b 468 chr2L 9084338 9084340 chr2L 16217660 16217660 8 7133321 12.0 11.5 11.8 0.6 7133322 chr2L 9084338 intron Toll-4 + chr2L 12650999 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_8_12650001 chr2L_12650001 RAL-371_125b 469 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 5 145889 14.5 11.5 13.0 0.4 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_5_16140001 chr2L_16140001 RAL-371_125b 470 chr2L 16226134 16226205 chr2L 16226271 16226341 15 135 3.0 4.5 3.8 3.1 207 chr2L 16226134 intergenic not near genes chr2L 16226238 intergenic not near genes chr2L 16226341 intergenic not near genes chr2L_15_16225001 chr2L_16225001 RAL-371_125b 471 chr2L 16242029 16242055 chr2L 16242171 16242197 4 142 3.5 2.0 2.8 1.1 168 chr2L 16242029 5` UTR CG42818 + chr2L 16242113 exon CG42818 + chr2L 16242197 exon CG42818 + chr2L_4_16240001 chr2L_16240001 RAL-371_125b 472 chr2L 16243171 16243367 chr2L 16243298 16243497 13 129 0.5 1.0 0.8 7.2 326 chr2L 16243171 exon CG42818 + chr2L 16243334 exon CG42818 + chr2L 16243497 exon CG42818 + chr2L_13_16240001 chr2L_16240001 RAL-371_125b 473 chr2L 16254843 16254911 chr2L 16255152 16255220 11 309 2.0 2.5 2.2 3.4 377 chr2L 16254843 intron PRL-1 - chr2L 16255032 intron PRL-1 - chr2L 16255220 intron PRL-1 - chr2L_11_16255001 chr2L_16255001 RAL-371_125b 474 chr2L 16361848 16361879 chr2L 16361983 16362014 6 133 1.0 6.5 3.8 1.2 166 chr2L 16361848 intergenic not near genes chr2L 16361931 intergenic not near genes chr2L 16362014 intergenic not near genes chr2L_6_16360001 chr2L_16360001 RAL-371_125b 475 chr2L 16384454 16384506 chr2L 16384593 16384634 16 137 6.0 4.5 5.2 2.6 180 chr2L 16384454 intergenic not near genes chr2L 16384544 intergenic not near genes chr2L 16384634 intergenic not near genes chr2L_16_16380001 chr2L_16380001 RAL-371_125b 476 chr2L 16386427 16386440 chr2L 16386555 16386568 5 128 0.0 4.5 2.2 1.6 141 chr2L 16386427 intergenic not near genes chr2L 16386498 intergenic not near genes chr2L 16386568 intergenic not near genes chr2L_5_16385001 chr2L_16385001 RAL-371_125b 477 chr2L 16407377 16407423 chr2L 16407557 16407603 7 180 3.0 3.0 3.0 1.8 226 chr2L 16407377 intron CG5888 - chr2L 16407490 intron CG5888 - chr2L 16407603 intron CG5888 - chr2L_7_16405001 chr2L_16405001 RAL-371_125b 478 chr2L 16414101 16414144 chr2L 16414227 16414270 9 126 3.5 5.0 4.2 1.7 169 chr2L 16414101 intron CG5888 - chr2L 16414186 intron CG5888 - chr2L 16414270 intron CG5888 - chr2L_9_16410001 chr2L_16410001 RAL-371_125b 479 chr2L 16434059 16434131 chr2L 16434191 16434263 11 132 3.0 1.0 2.0 3.7 204 chr2L 16434059 intron CG5888 - chr2L 16434161 intron CG5888 - chr2L 16434263 intron CG5888 - chr2L_11_16430001 chr2L_16430001 RAL-371_125b 480 chr2L 16447770 16447811 chr2L 16447899 16447940 9 129 4.0 3.5 3.8 1.9 170 chr2L 16447770 intron,intron CG5888 -,Idgf2 + chr2L 16447855 intron,intron CG5888 -,Idgf2 + chr2L 16447940 intron,intron CG5888 -,Idgf2 + chr2L_9_16445001 chr2L_16445001 RAL-371_125b 481 chr2L 16511928 16511970 chr2L 16519185 16519227 HMS-Beagle 6 7256 1.0 6.0 3.5 1.3 7299 chr2L 16511928 intron CG5953 - chr2L 16515578 intron CG5953 - chr2L 16519227 intron CG5953 - chr2L_6_16515001 chr2L_16515001 RAL-371_125b 482 chr2L 16547149 16547202 chr2L 16547290 16547343 6 139 0.0 1.5 0.8 3.3 194 chr2L 16547149 intron CG42389 + chr2L 16547246 intron CG42389 + chr2L 16547343 intron CG42389 + chr2L_6_16545001 chr2L_16545001 RAL-371_125b 483 chr2L 16550622 16550676 chr2L 16550748 16550797 6 124 2.5 3.0 2.8 1.6 175 chr2L 16550622 intron CG42389 + chr2L 16550710 intron CG42389 + chr2L 16550797 intron CG42389 + chr2L_6_16550001 chr2L_16550001 RAL-371_125b 484 chr2L 16654409 16654415 chr2L 16654576 16654582 5 167 8.0 5.0 6.5 0.7 173 chr2L 16654409 intron CG42389 + chr2L 16654496 intron CG42389 + chr2L 16654582 intron CG42389 + chr2L_5_16650001 chr2L_16650001 RAL-371_125b 485 chr2L 16654419 16654471 chr2L 16654573 16654638 11 165 3.0 5.0 4.0 2.2 219 chr2L 16654419 intron CG42389 + chr2L 16654528 intron CG42389 + chr2L 16654638 intron CG42389 + chr2L_11_16650001 chr2L_16650001 RAL-371_125b 486 chr2L 16670379 16670441 chr2L 16670506 16670568 18 127 5.5 3.5 4.5 3.3 189 chr2L 16670379 intron Trpgamma - chr2L 16670474 intron Trpgamma - chr2L 16670568 intron Trpgamma - chr2L_18_16670001 chr2L_16670001 RAL-371_125b 487 chr2L 16709027 16709103 chr2L 16709161 16709237 8 134 3.0 2.5 2.8 2.1 210 chr2L 16709027 intron CG31808 - chr2L 16709132 intron CG31808 - chr2L 16709237 intron CG31808 - chr2L_8_16705001 chr2L_16705001 RAL-371_125b 488 chr2L 16796068 16796095 chr2L 16796219 16796246 4 151 0.0 4.0 2.0 1.3 178 chr2L 16796068 intergenic Ugt36Ba + chr2L 16796157 intergenic Ugt36Ba +,Ugt36Bb + chr2L 16796246 intergenic Ugt36Ba +,Ugt36Bb + chr2L_4_16795001 chr2L_16795001 RAL-371_125b 489 chr2L 16866978 16867036 chr2L 16867123 16867181 9 145 2.5 2.5 2.5 2.6 203 chr2L 16866978 intergenic not near genes chr2L 16867080 intergenic not near genes chr2L 16867181 intergenic not near genes chr2L_9_16865001 chr2L_16865001 RAL-371_125b 490 chr2L 16880819 16880828 chr2L 16880944 16880960 5 131 4.5 3.0 3.8 1.0 141 chr2L 16880819 intron,intron CG31743 +,CG34313 + chr2L 16880890 intron,intron CG31743 +,CG34313 + chr2L 16880960 intron,intron CG31743 +,CG34313 + chr2L_5_16880001 chr2L_16880001 RAL-371_125b 491 chr2L 16944187 16944233 chr2L 16944306 16944367 4 132 2.0 3.0 2.5 1.1 180 chr2L 16944187 intergenic not near genes chr2L 16944277 intergenic CR43053 - chr2L 16944367 intergenic CR43053 - chr2L_4_16940001 chr2L_16940001 RAL-371_125b 492 chr2L 16987512 16987561 chr2L 16987638 16987687 11 126 2.5 3.0 2.8 2.9 175 chr2L 16987512 intron beat-IIIb + chr2L 16987600 intron beat-IIIb + chr2L 16987687 intron beat-IIIb + chr2L_11_16985001 chr2L_16985001 RAL-371_125b 493 chr2L 17018662 17018736 chr2L 17018788 17018856 13 126 4.5 2.0 3.2 3.1 194 chr2L 17018662 intergenic not near genes chr2L 17018759 intergenic not near genes chr2L 17018856 intergenic not near genes chr2L_13_17015001 chr2L_17015001 RAL-371_125b 494 chr2L 17032468 17032510 chr2L 17032603 17032645 8 135 4.5 5.0 4.8 1.4 177 chr2L 17032468 intergenic not near genes chr2L 17032556 intergenic not near genes chr2L 17032645 intergenic not near genes chr2L_8_17030001 chr2L_17030001 RAL-371_125b 495 chr2L 17070151 17070209 chr2L 17070297 17070346 9 145 2.0 1.5 1.8 3.2 195 chr2L 17070151 intergenic not near genes chr2L 17070248 intergenic not near genes chr2L 17070346 intergenic not near genes chr2L_9_17070001 chr2L_17070001 RAL-371_125b 496 chr2L 17079838 17079885 chr2L 17079946 17079958 5 113 3.0 3.5 3.2 1.2 120 chr2L 17079838 intergenic not near genes chr2L 17079898 intergenic not near genes chr2L 17079958 intergenic not near genes chr2L_5_17075001 chr2L_17075001 RAL-371_125b 497 chr2L 17114186 17114223 chr2L 17114317 17114364 9 139 2.5 0.5 1.5 3.6 178 chr2L 17114186 intergenic not near genes chr2L 17114275 intergenic not near genes chr2L 17114364 intergenic not near genes chr2L_9_17110001 chr2L_17110001 RAL-371_125b 498 chr2L 17154765 17154838 chr2L 17154893 17154931 7 119 3.0 2.5 2.8 1.8 166 chr2L 17154765 intron,intron CG34106 +,beat-IIIa + chr2L 17154848 intron,intron CG34106 +,beat-IIIa + chr2L 17154931 intron,intron CG34106 +,beat-IIIa + chr2L_7_17150001 chr2L_17150001 RAL-371_125b 499 chr2L 17158700 17158745 chr2L 17158852 17158897 7 152 5.0 0.0 2.5 2.0 197 chr2L 17158700 5` UTR,exon CG34106 +,beat-IIIa + chr2L 17158798 intron,intron CG34106 +,beat-IIIa + chr2L 17158897 intron,intron CG34106 +,beat-IIIa + chr2L_7_17155001 chr2L_17155001 RAL-371_125b 500 chr2L 17167526 17167580 chr2L 17167817 17167871 pogo 5 291 0.5 4.5 2.5 1.4 345 chr2L 17167526 intron,intron CG34106 +,beat-IIIa + chr2L 17167698 intron,intron CG34106 +,beat-IIIa + chr2L 17167871 intron,intron CG34106 +,beat-IIIa + chr2L_5_17165001 chr2L_17165001 RAL-371_125b 501 chr2L 17168165 17168240 chr2L 17168474 17168549 13 309 2.5 2.5 2.5 3.7 384 chr2L 17168165 intron,intron CG34106 +,beat-IIIa + chr2L 17168357 intron,intron CG34106 +,beat-IIIa + chr2L 17168549 intron,intron CG34106 +,beat-IIIa + chr2L_13_17165001 chr2L_17165001 RAL-371_125b 502 chr2L 17169026 17169091 chr2L 17169162 17169227 12 135 4.5 3.0 3.8 2.5 201 chr2L 17169026 intron,intron CG34106 +,beat-IIIa + chr2L 17169126 intron,intron CG34106 +,beat-IIIa + chr2L 17169227 intron,intron CG34106 +,beat-IIIa + chr2L_12_17165001 chr2L_17165001 RAL-371_125b 503 chr2L 17199126 17199182 chr2L 17200643 17200699 hobo 7 1517 2.0 4.5 3.2 1.7 1573 chr2L 17199126 intron beat-IIIc - chr2L 17199912 intron beat-IIIc - chr2L 17200699 intron beat-IIIc - chr2L_7_17195001 chr2L_17195001 RAL-371_125b 504 chr2L 17238787 17238847 chr2L 17238921 17238954 7 131 2.0 3.5 2.8 1.8 167 chr2L 17238787 intron beat-IIIc - chr2L 17238870 intron beat-IIIc - chr2L 17238954 intron beat-IIIc - chr2L_7_17235001 chr2L_17235001 RAL-371_125b 505 chr2L 17240528 17240584 chr2L 17240660 17240721 13 136 4.5 4.0 4.2 2.5 193 chr2L 17240528 intron beat-IIIc - chr2L 17240624 intron beat-IIIc - chr2L 17240721 intron beat-IIIc - chr2L_13_17240001 chr2L_17240001 RAL-371_125b 506 chr2L 17243916 17243945 chr2L 17244174 17244203 5 258 4.5 5.0 4.8 0.9 287 chr2L 17243916 intron beat-IIIc - chr2L 17244060 intron beat-IIIc - chr2L 17244203 intron beat-IIIc - chr2L_5_17240001 chr2L_17240001 RAL-371_125b 507 chr2L 17273150 17273191 chr2L 17277983 17278024 F-element 7 4832 2.0 1.0 1.5 2.8 4874 chr2L 17273150 intergenic not near genes chr2L 17275587 intergenic not near genes chr2L 17278024 intergenic not near genes chr2L_7_17275001 chr2L_17275001 RAL-371_125b 508 chr2L 17280975 17281007 chr2L 17281073 17281129 7 115 2.5 6.0 4.2 1.3 154 chr2L 17280975 intergenic CR45729 + chr2L 17281052 intergenic not near genes chr2L 17281129 intergenic not near genes chr2L_7_17280001 chr2L_17280001 RAL-371_125b 509 chr2L 17292318 17292392 chr2L 17292448 17292523 5 130 2.5 0.0 1.2 2.3 205 chr2L 17292318 intergenic CG6380 - chr2L 17292420 intergenic CG6380 - chr2L 17292523 intergenic CG6380 - chr2L_5_17290001 chr2L_17290001 RAL-371_125b 510 chr2L 17327879 17327925 chr2L 17328015 17328061 6 136 5.0 5.0 5.0 1.0 182 chr2L 17327879 intergenic not near genes chr2L 17327970 intergenic not near genes chr2L 17328061 intergenic not near genes chr2L_6_17325001 chr2L_17325001 RAL-371_125b 511 chr2L 17328399 17328487 chr2L 17328561 17328637 7 150 0.0 2.0 1.0 3.5 238 chr2L 17328399 intergenic not near genes chr2L 17328518 intergenic not near genes chr2L 17328637 intergenic not near genes chr2L_7_17325001 chr2L_17325001 RAL-371_125b 512 chr2L 17335481 17335523 chr2L 17336712 17336754 1360 8 1231 4.5 3.0 3.8 1.7 1273 chr2L 17335481 intergenic not near genes chr2L 17336118 intergenic not near genes chr2L 17336754 intergenic not near genes chr2L_8_17335001 chr2L_17335001 RAL-371_125b 513 chr2L 17377240 17377279 chr2L 17377386 17377425 16 145 6.0 3.0 4.5 2.9 185 chr2L 17377240 intron Lrch - chr2L 17377332 intron Lrch - chr2L 17377425 intron Lrch - chr2L_16_17375001 chr2L_17375001 RAL-371_125b 514 chr2L 17377291 17377305 chr2L 17377402 17377451 4 132 3.5 4.5 4.0 0.8 160 chr2L 17377291 intron Lrch - chr2L 17377371 intron Lrch - chr2L 17377451 intron Lrch - chr2L_4_17375001 chr2L_17375001 RAL-371_125b 515 chr2L 17419248 17419266 chr2L 17419374 17419392 9 126 10.0 2.5 6.2 1.2 144 chr2L 17419248 intron Dif - chr2L 17419320 intron Dif - chr2L 17419392 intron Dif - chr2L_9_17415001 chr2L_17415001 RAL-371_125b 516 chr2L 17420843 17420912 chr2L 17420974 17421043 6 130 4.0 1.5 2.8 1.6 200 chr2L 17420843 intron Dif - chr2L 17420943 intron Dif - chr2L 17421043 intron Dif - chr2L_6_17420001 chr2L_17420001 RAL-371_125b 517 chr2L 17432585 17432657 chr2L 17432712 17432784 18 125 3.5 1.5 2.5 5.1 199 chr2L 17432585 intron Dif - chr2L 17432684 intron Dif - chr2L 17432784 intron Dif - chr2L_18_17430001 chr2L_17430001 RAL-371_125b 518 chr2L 17456409 17456426 chr2L 17456540 17456557 4 131 0.0 4.5 2.2 1.2 148 chr2L 17456409 intron CG5050 + chr2L 17456483 intron CG5050 + chr2L 17456557 intron CG5050 + chr2L_4_17455001 chr2L_17455001 RAL-371_125b 519 chr2L 17543554 17543600 chr2L 17543697 17543743 10 142 4.0 4.0 4.0 2.0 189 chr2L 17543554 intergenic not near genes chr2L 17543648 intergenic not near genes chr2L 17543743 intergenic not near genes chr2L_10_17540001 chr2L_17540001 RAL-371_125b 520 chr2L 17550115 17550163 chr2L 17550243 17550310 7 144 2.5 1.5 2.0 2.3 195 chr2L 17550115 intergenic not near genes chr2L 17550212 intergenic not near genes chr2L 17550310 intergenic not near genes chr2L_7_17550001 chr2L_17550001 RAL-371_125b 521 chr2L 17577684 17577735 chr2L 17577810 17577861 12 126 5.5 5.0 5.2 1.9 177 chr2L 17577684 intergenic not near genes chr2L 17577772 intergenic not near genes chr2L 17577861 intergenic not near genes chr2L_12_17575001 chr2L_17575001 RAL-371_125b 522 chr2L 17595448 17595484 chr2L 17595597 17595646 6 160 2.5 4.0 3.2 1.4 198 chr2L 17595448 intron Sytalpha + chr2L 17595547 intron Sytalpha + chr2L 17595646 intron Sytalpha + chr2L_6_17595001 chr2L_17595001 RAL-371_125b 523 chr2L 17687487 17687516 chr2L 17692282 17692300 F-element 5 4793 2.0 4.0 3.0 1.2 4813 chr2L 17687487 intron CadN - chr2L 17689894 intron CadN - chr2L 17692300 intron CadN - chr2L_5_17685001 chr2L_17685001 RAL-371_125b 524 chr2L 17727825 17727864 chr2L 17729342 17729381 hobo 9 1515 4.0 6.0 5.0 1.5 1556 chr2L 17727825 intron CadN - chr2L 17728603 intron CadN - chr2L 17729381 intron CadN - chr2L_9_17725001 chr2L_17725001 RAL-371_125b 525 chr2L 17740219 17740274 chr2L 17740426 17740448 5 190 2.5 3.5 3.0 1.2 229 chr2L 17740219 intron CadN - chr2L 17740334 intron CadN - chr2L 17740448 intron CadN - chr2L_5_17740001 chr2L_17740001 RAL-371_125b 526 chr2L 17784604 17784670 chr2L 17784752 17784813 4 147 2.5 4.0 3.2 1.0 209 chr2L 17784604 intergenic not near genes chr2L 17784708 intergenic not near genes chr2L 17784813 intergenic not near genes chr2L_4_17780001 chr2L_17780001 RAL-371_125b 527 chr2L 17795978 17796043 chr2L 17796109 17796174 15 130 2.0 0.5 1.2 6.8 196 chr2L 17795978 intron CadN2 - chr2L 17796076 intron CadN2 - chr2L 17796174 intron CadN2 - chr2L_15_17795001 chr2L_17795001 RAL-371_125b 528 chr2L 17819886 17819946 chr2L 17825139 17825199 copia 10 5253 2.0 3.5 2.8 2.6 5313 chr2L 17819886 intron CadN2 - chr2L 17822542 intron CadN2 - chr2L 17825199 intron CadN2 - chr2L_10_17820001 chr2L_17820001 RAL-371_125b 529 chr2L 17879978 17880024 chr2L 17880111 17880156 6 135 2.0 3.0 2.5 1.7 178 chr2L 17879978 intergenic not near genes chr2L 17880067 intergenic not near genes chr2L 17880156 intergenic not near genes chr2L_6_17880001 chr2L_17880001 RAL-371_125b 530 chr2L 17897177 17897237 chr2L 17897308 17897368 10 126 1.0 4.5 2.8 2.6 191 chr2L 17897177 intergenic not near genes chr2L 17897272 intergenic not near genes chr2L 17897368 intergenic not near genes chr2L_10_17895001 chr2L_17895001 RAL-371_125b 531 chr2L 17911928 17911988 chr2L 17914149 17914218 pogo 12 2230 5.0 2.0 3.5 2.7 2290 chr2L 17911928 intergenic not near genes chr2L 17913073 intergenic not near genes chr2L 17914218 intergenic CG43271 - chr2L_12_17910001 chr2L_17910001 RAL-371_125b 532 chr2L 17944382 17944427 chr2L 17944588 17944640 7 212 5.0 6.0 5.5 1.1 258 chr2L 17944382 intergenic not near genes chr2L 17944511 intergenic not near genes chr2L 17944640 intergenic not near genes chr2L_7_17940001 chr2L_17940001 RAL-371_125b 533 chr2L 17951906 17951971 chr2L 17953423 17953488 hobo 9 1517 5.5 3.0 4.2 1.7 1582 chr2L 17951906 intergenic CR44398 -,CR44397 - chr2L 17952697 intergenic not near genes chr2L 17953488 intergenic not near genes chr2L_9_17950001 chr2L_17950001 RAL-371_125b 534 chr2L 18051839 18051892 chr2L 18061030 18061076 roo 15 9193 3.0 4.5 3.8 3.1 9237 chr2L 18051839 intron rdo + chr2L 18056458 intron rdo + chr2L 18061076 intron rdo + chr2L_15_18055001 chr2L_18055001 RAL-371_125b 535 chr2L 18095554 18095591 chr2L 18095685 18095722 12 131 8.0 3.5 5.8 1.8 168 chr2L 18095554 intergenic not near genes chr2L 18095638 intergenic not near genes chr2L 18095722 intergenic not near genes chr2L_12_18095001 chr2L_18095001 RAL-371_125b 536 chr2L 18143427 18143499 chr2L 18143557 18143626 19 127 3.0 3.0 3.0 4.8 199 chr2L 18143427 intron Socs36E - chr2L 18143526 intron Socs36E - chr2L 18143626 intron Socs36E - chr2L_19_18140001 chr2L_18140001 RAL-371_125b 537 chr2L 18159749 18159776 chr2L 18162236 18162263 4 2487 17.0 13.5 15.2 0.2 2514 chr2L 18159749 intergenic CG42750 -,CG7200 - chr2L 18161006 3` UTR CG42750 - chr2L 18162263 intron CG42750 - chr2L_4_18160001 chr2L_18160001 RAL-371_125b 538 chr2L 18254770 18254834 chr2L 18254920 18254984 10 150 3.5 1.5 2.5 2.9 214 chr2L 18254770 intron CG42750 - chr2L 18254877 intron CG42750 - chr2L 18254984 intron CG42750 - chr2L_10_18250001 chr2L_18250001 RAL-371_125b 539 chr2L 18264036 18264085 chr2L 18264163 18264212 9 127 4.0 6.0 5.0 1.5 176 chr2L 18264036 intron CG42750 - chr2L 18264124 intron CG42750 - chr2L 18264212 intron CG42750 - chr2L_9_18260001 chr2L_18260001 RAL-371_125b 540 chr2L 18274018 18274051 chr2L 18274154 18274170 9 134 6.0 5.5 5.8 1.3 152 chr2L 18274018 intron CG42750 - chr2L 18274094 intron CG42750 - chr2L 18274170 intron CG42750 - chr2L_9_18270001 chr2L_18270001 RAL-371_125b 541 chr2L 18296918 18296949 chr2L 18297040 18297075 8 124 4.5 10.0 7.2 1.0 157 chr2L 18296918 exon CG5790 + chr2L 18296996 exon CG5790 + chr2L 18297075 exon CG5790 + chr2L_8_18295001 chr2L_18295001 RAL-371_125b 542 chr2L 18300237 18300264 chr2L 18300355 18300365 8 123 5.0 8.5 6.8 1.0 128 chr2L 18300237 intergenic not near genes chr2L 18300301 intergenic not near genes chr2L 18300365 intergenic not near genes chr2L_8_18300001 chr2L_18300001 RAL-371_125b 543 chr2L 18303928 18303998 chr2L 18304069 18304139 12 138 2.5 1.5 2.0 4.0 211 chr2L 18303928 intergenic not near genes chr2L 18304034 intergenic not near genes chr2L 18304139 intergenic not near genes chr2L_12_18300001 chr2L_18300001 RAL-371_125b 544 chr2L 18320879 18320936 chr2L 18328932 18328989 11 8054 31.0 23.0 27.0 0.4 8110 chr2L 18320879 intron Fas3 + chr2L 18324934 intron Fas3 + chr2L 18328989 intron Fas3 + chr2L_11_18320001 chr2L_18320001 RAL-371_125b 545 chr2L 18334573 18334633 chr2L 18334708 18334768 8 135 4.5 4.0 4.2 1.5 195 chr2L 18334573 intron Fas3 + chr2L 18334670 intron Fas3 + chr2L 18334768 intron Fas3 + chr2L_8_18330001 chr2L_18330001 RAL-371_125b 546 chr2L 18407984 18408035 chr2L 18412818 18412877 Doc 5 4836 5.0 0.0 2.5 1.4 4893 chr2L 18407984 intergenic not near genes chr2L 18410430 intergenic not near genes chr2L 18412877 intergenic not near genes chr2L_5_18410001 chr2L_18410001 RAL-371_125b 547 chr2L 18538547 18538567 chr2L 18538679 18538699 5 132 1.0 6.0 3.5 1.1 152 chr2L 18538547 intron Pde11 - chr2L 18538623 intron Pde11 - chr2L 18538699 intron Pde11 - chr2L_5_18535001 chr2L_18535001 RAL-371_125b 548 chr2L 18762349 18762367 chr2L 18762440 18762509 6 134 3.5 2.5 3.0 1.5 160 chr2L 18762349 intergenic not near genes chr2L 18762429 intergenic ham - chr2L 18762509 intergenic ham - chr2L_6_18760001 chr2L_18760001 RAL-371_125b 549 chr2L 18767607 18767659 chr2L 18767715 18767788 10 127 3.0 6.0 4.5 1.8 181 chr2L 18767607 intron ham - chr2L 18767698 intron ham - chr2L 18767788 intron ham - chr2L_10_18765001 chr2L_18765001 RAL-371_125b 550 chr2L 18811418 18811432 chr2L 18811550 18811562 4 132 3.5 4.5 4.0 0.8 144 chr2L 18811418 intergenic CG10570 -,CG42502 - chr2L 18811490 intergenic not near genes chr2L 18811562 intergenic not near genes chr2L_4_18810001 chr2L_18810001 RAL-371_125b 551 chr2L 18811622 18811674 chr2L 18811881 18811933 8 257 2.5 2.5 2.5 2.3 311 chr2L 18811622 intergenic not near genes chr2L 18811778 intergenic not near genes chr2L 18811933 intergenic not near genes chr2L_8_18810001 chr2L_18810001 RAL-371_125b 552 chr2L 18812523 18812585 chr2L 18812825 18812898 12 312 0.0 4.0 2.0 4.0 375 chr2L 18812523 intergenic CG17325 +,CG42305 + chr2L 18812710 5` UTR,5` UTR CG17325 +,CG42305 + chr2L 18812898 5` UTR,5` UTR CG17325 +,CG42305 + chr2L_12_18810001 chr2L_18810001 RAL-371_125b 553 chr2L 18866217 18866279 chr2L 18866694 18866753 10 477 3.0 0.5 1.8 3.6 536 chr2L 18866217 intron tup - chr2L 18866485 intron tup - chr2L 18866753 intron tup - chr2L_10_18865001 chr2L_18865001 RAL-371_125b 554 chr2L 18872919 18872931 chr2L 18873044 18873067 4 132 9.0 3.0 6.0 0.6 148 chr2L 18872919 intron tup - chr2L 18872993 intron tup - chr2L 18873067 intron tup - chr2L_4_18870001 chr2L_18870001 RAL-371_125b 555 chr2L 18872951 18872979 chr2L 18873032 18873094 9 122 5.5 1.5 3.5 2.0 143 chr2L 18872951 intron tup - chr2L 18873022 intron tup - chr2L 18873094 intron tup - chr2L_9_18870001 chr2L_18870001 RAL-371_125b 556 chr2L 18883813 18883878 chr2L 18883945 18884010 12 130 4.0 3.0 3.5 2.7 197 chr2L 18883813 intergenic not near genes chr2L 18883912 intergenic not near genes chr2L 18884010 intergenic not near genes chr2L_12_18880001 chr2L_18880001 RAL-371_125b 557 chr2L 18898355 18898415 chr2L 18898487 18898501 8 126 3.0 0.0 1.5 3.2 146 chr2L 18898355 intergenic not near genes chr2L 18898428 intergenic not near genes chr2L 18898501 intergenic not near genes chr2L_8_18895001 chr2L_18895001 RAL-371_125b 558 chr2L 18902574 18902650 chr2L 18902905 18902981 14 328 3.0 2.0 2.5 4.0 407 chr2L 18902574 intergenic not near genes chr2L 18902778 intergenic not near genes chr2L 18902981 intergenic not near genes chr2L_14_18900001 chr2L_18900001 RAL-371_125b 559 chr2L 18962190 18962251 chr2L 18962335 18962396 4 145 0.0 2.5 1.2 1.8 206 chr2L 18962190 intron Nak - chr2L 18962293 intron Nak - chr2L 18962396 intron Nak - chr2L_4_18960001 chr2L_18960001 RAL-371_125b 560 chr2L 19016203 19016270 chr2L 19016349 19016416 10 146 3.5 6.0 4.8 1.7 213 chr2L 19016203 intergenic not near genes chr2L 19016310 intergenic not near genes chr2L 19016416 intergenic not near genes chr2L_10_19015001 chr2L_19015001 RAL-371_125b 561 chr2L 19035877 19035919 chr2L 19036011 19036059 9 137 6.0 3.5 4.8 1.6 182 chr2L 19035877 intron mib2 + chr2L 19035968 intron mib2 + chr2L 19036059 intron mib2 + chr2L_9_19035001 chr2L_19035001 RAL-371_125b 562 chr2L 19035921 19035944 chr2L 19036007 19036084 4 124 4.5 2.0 3.2 1.0 163 chr2L 19035921 intron mib2 + chr2L 19036002 intron mib2 + chr2L 19036084 intron mib2 + chr2L_4_19035001 chr2L_19035001 RAL-371_125b 563 chr2L 19043276 19043319 chr2L 19043405 19043458 5 137 3.5 1.5 2.5 1.4 182 chr2L 19043276 exon Catsup + chr2L 19043367 3` UTR Catsup + chr2L 19043458 3` UTR Catsup + chr2L_5_19040001 chr2L_19040001 RAL-371_125b 564 chr2L 19121018 19121071 chr2L 19121146 19121200 10 128 0.5 3.5 2.0 3.3 182 chr2L 19121018 intergenic l(2)37Cc - chr2L 19121109 intergenic l(2)37Cc - chr2L 19121200 intergenic l(2)37Cc - chr2L_10_19120001 chr2L_19120001 RAL-371_125b 565 chr2L 19121535 19121558 chr2L 19121656 19121689 5 128 5.0 4.0 4.5 0.9 154 chr2L 19121535 3` UTR l(2)37Cc - chr2L 19121612 3` UTR l(2)37Cc - chr2L 19121689 3` UTR l(2)37Cc - chr2L_5_19120001 chr2L_19120001 RAL-371_125b 566 chr2L 19145152 19145181 chr2L 19145287 19145296 5 127 7.0 3.5 5.2 0.8 144 chr2L 19145152 intron brat + chr2L 19145224 intron brat + chr2L 19145296 intron brat + chr2L_5_19145001 chr2L_19145001 RAL-371_125b 567 chr2L 19147256 19147390 chr2L 19154403 19154475 297 6 7116 0.5 4.0 2.2 1.9 7219 chr2L 19147256 intron brat + chr2L 19150866 intron brat + chr2L 19154475 intron brat + chr2L_6_19150001 chr2L_19150001 RAL-371_125b 568 chr2L 19226863 19226937 chr2L 19226999 19227073 11 131 2.0 5.5 3.8 2.3 210 chr2L 19226863 intergenic not near genes chr2L 19226968 intergenic not near genes chr2L 19227073 intergenic not near genes chr2L_11_19225001 chr2L_19225001 RAL-371_125b 569 chr2L 19246795 19246833 chr2L 19246923 19246961 8 128 4.5 1.5 3.0 2.0 166 chr2L 19246795 intergenic not near genes chr2L 19246878 intergenic not near genes chr2L 19246961 intergenic not near genes chr2L_8_19245001 chr2L_19245001 RAL-371_125b 570 chr2L 19270851 19270924 chr2L 19270991 19271064 8 139 0.0 5.5 2.8 2.1 213 chr2L 19270851 intron CR44190 - chr2L 19270958 intron CR44190 - chr2L 19271064 intron CR44190 - chr2L_8_19270001 chr2L_19270001 RAL-371_125b 571 chr2L 19357501 19357565 chr2L 19357641 19357705 11 139 5.0 4.0 4.5 2.0 204 chr2L 19357501 intron dnt - chr2L 19357603 intron dnt - chr2L 19357705 intron dnt - chr2L_11_19355001 chr2L_19355001 RAL-371_125b 572 chr2L 19374824 19374882 chr2L 19374958 19375088 8 179 5.0 0.0 2.5 2.3 264 chr2L 19374824 intergenic not near genes chr2L 19374956 intergenic not near genes chr2L 19375088 intergenic not near genes chr2L_8_19370001 chr2L_19370001 RAL-371_125b 573 chr2L 19374889 19374960 chr2L 19374956 19375135 6 172 0.0 0.0 0.0 6.0 246 chr2L 19374889 intergenic not near genes chr2L 19375012 intergenic not near genes chr2L 19375135 intergenic not near genes chr2L_6_19370001 chr2L_19370001 RAL-371_125b 574 chr2L 19380457 19380499 chr2L 19380587 19380629 9 123 4.5 4.0 4.2 1.7 172 chr2L 19380457 intergenic CG17350 + chr2L 19380543 intergenic CG17350 + chr2L 19380629 intergenic CG17350 + chr2L_9_19380001 chr2L_19380001 RAL-371_125b 575 chr2L 19441021 19441046 chr2L 19441148 19441173 8 127 7.0 3.5 5.2 1.3 152 chr2L 19441021 intron CG10237 - chr2L 19441097 intron CG10237 - chr2L 19441173 5` UTR CG10237 - chr2L_8_19440001 chr2L_19440001 RAL-371_125b 576 chr2L 19468984 19469059 chr2L 19469110 19469181 12 126 2.5 3.5 3.0 3.0 197 chr2L 19468984 intergenic CR45722 + chr2L 19469082 intergenic CR45722 + chr2L 19469181 5` UTR CR45722 + chr2L_12_19465001 chr2L_19465001 RAL-371_125b 577 chr2L 19557780 19557984 chr2L 19557922 19558114 10 134 1.5 1.5 1.5 4.0 334 chr2L 19557780 intergenic Tep5 + chr2L 19557947 intergenic Tep5 + chr2L 19558114 exon Tep5 + chr2L_10_19555001 chr2L_19555001 RAL-371_125b 578 chr2L 19558480 19558545 chr2L 19558634 19558699 7 154 0.0 7.5 3.8 1.5 219 chr2L 19558480 intron Tep5 + chr2L 19558590 intron Tep5 + chr2L 19558699 intron Tep5 + chr2L_7_19555001 chr2L_19555001 RAL-371_125b 579 chr2L 19559955 19560032 chr2L 19560258 19560334 12 300 7.0 6.0 6.5 1.6 379 chr2L 19559955 exon Tep5 + chr2L 19560144 exon Tep5 + chr2L 19560334 intron Tep5 + chr2L_12_19560001 chr2L_19560001 RAL-371_125b 580 chr2L 19601528 19601584 chr2L 19601654 19601711 5 127 2.0 3.5 2.8 1.3 183 chr2L 19601528 intron,intron Lar +,CR44978 - chr2L 19601620 intron,intron Lar +,CR44978 - chr2L 19601711 intron,intron Lar +,CR44978 - chr2L_5_19600001 chr2L_19600001 RAL-371_125b 581 chr2L 19612950 19612987 chr2L 19613067 19613094 9 132 2.0 5.0 3.5 2.0 144 chr2L 19612950 intron Lar + chr2L 19613022 intron Lar + chr2L 19613094 intron Lar + chr2L_9_19610001 chr2L_19610001 RAL-371_125b 582 chr2L 19620059 19620085 chr2L 19621093 19621124 jockey 7 1038 9.5 4.5 7.0 0.9 1065 chr2L 19620059 intron Lar + chr2L 19620592 intron Lar + chr2L 19621124 intron Lar + chr2L_7_19620001 chr2L_19620001 RAL-371_125b 583 chr2L 19620087 19620119 chr2L 19621079 19621141 jockey 5 1026 5.5 2.0 3.8 1.0 1054 chr2L 19620087 intron Lar + chr2L 19620614 intron Lar + chr2L 19621141 intron Lar + chr2L_5_19620001 chr2L_19620001 RAL-371_125b 584 chr2L 19652535 19652591 chr2L 19674019 19674077 opus 10 21485 2.0 5.5 3.8 2.1 21542 chr2L 19652535 intron Lar + chr2L 19663306 intron Lar + chr2L 19674077 intron Lar + chr2L_10_19660001 chr2L_19660001 RAL-371_125b 585 chr2L 19703515 19703555 chr2L 19712696 19712731 roo 11 9182 5.0 2.5 3.8 2.3 9216 chr2L 19703515 intron Lar + chr2L 19708123 intron Lar + chr2L 19712731 intron Lar + chr2L_11_19705001 chr2L_19705001 RAL-371_125b 586 chr2L 19737321 19737383 chr2L 19740827 19740852 1360 9 3505 2.0 2.5 2.2 2.8 3531 chr2L 19737321 intergenic Nf-YB + chr2L 19739086 intergenic not near genes chr2L 19740852 intergenic not near genes chr2L_9_19735001 chr2L_19735001 RAL-371_125b 587 chr2L 19762775 19762826 chr2L 19763067 19763118 pogo 13 289 3.5 3.5 3.5 2.9 343 chr2L 19762775 exon fbp - chr2L 19762946 intron fbp - chr2L 19763118 intron fbp - chr2L_13_19760001 chr2L_19760001 RAL-371_125b 588 chr2L 19773121 19773190 chr2L 19773258 19773327 7 137 3.5 2.0 2.8 1.8 206 chr2L 19773121 intergenic not near genes chr2L 19773224 intergenic not near genes chr2L 19773327 intergenic not near genes chr2L_7_19770001 chr2L_19770001 RAL-371_125b 589 chr2L 19776621 19776655 chr2L 19776751 19776785 5 130 4.0 5.0 4.5 0.9 164 chr2L 19776621 3` UTR CdGAPr - chr2L 19776703 3` UTR CdGAPr - chr2L 19776785 3` UTR CdGAPr - chr2L_5_19775001 chr2L_19775001 RAL-371_125b 590 chr2L 19824372 19824429 chr2L 19824505 19824562 6 133 2.0 3.0 2.5 1.7 190 chr2L 19824372 intron sick + chr2L 19824467 intron sick + chr2L 19824562 intron sick + chr2L_6_19820001 chr2L_19820001 RAL-371_125b 591 chr2L 19837233 19837309 chr2L 19837363 19837438 14 129 6.0 5.5 5.8 2.1 205 chr2L 19837233 intron sick + chr2L 19837336 intron sick + chr2L 19837438 intron sick + chr2L_14_19835001 chr2L_19835001 RAL-371_125b 592 chr2L 19846236 19846265 chr2L 19846366 19846396 9 131 0.0 8.0 4.0 1.8 160 chr2L 19846236 intron sick + chr2L 19846316 intron sick + chr2L 19846396 intron sick + chr2L_9_19845001 chr2L_19845001 RAL-371_125b 593 chr2L 19901457 19901506 chr2L 19901610 19901659 5 152 3.5 6.0 4.8 0.9 202 chr2L 19901457 intron sick + chr2L 19901558 intron sick + chr2L 19901659 intron sick + chr2L_5_19900001 chr2L_19900001 RAL-371_125b 594 chr2L 19911254 19911311 chr2L 19911392 19911435 15 132 5.0 4.0 4.5 2.7 181 chr2L 19911254 intron,3` UTR sick +,CR43097 - chr2L 19911344 intron,3` UTR sick +,CR43097 - chr2L 19911435 intron,3` UTR sick +,CR43097 - chr2L_15_19910001 chr2L_19910001 RAL-371_125b 595 chr2L 19935220 19935256 chr2L 19935331 19935336 7 115 3.0 3.5 3.2 1.7 116 chr2L 19935220 intron sick + chr2L 19935278 intron sick + chr2L 19935336 intron sick + chr2L_7_19935001 chr2L_19935001 RAL-371_125b 596 chr2L 19950169 19950193 chr2L 19950301 19950325 9 132 3.0 2.0 2.5 2.6 156 chr2L 19950169 intron sick + chr2L 19950247 intron sick + chr2L 19950325 intron sick + chr2L_9_19950001 chr2L_19950001 RAL-371_125b 597 chr2L 20005831 20005897 chr2L 20010957 20011023 flea 9 5126 2.5 3.5 3.0 2.2 5192 chr2L 20005831 intron CG43861 - chr2L 20008427 intron CG43861 - chr2L 20011023 intron CG43861 - chr2L_9_20005001 chr2L_20005001 RAL-371_125b 598 chr2L 20011696 20011756 chr2L 20011829 20011889 7 130 2.5 0.5 1.5 2.8 193 chr2L 20011696 intron CG43861 - chr2L 20011792 intron CG43861 - chr2L 20011889 intron CG43861 - chr2L_7_20010001 chr2L_20010001 RAL-371_125b 599 chr2L 20022040 20022094 chr2L 20022203 20022257 8 162 1.0 5.0 3.0 2.0 217 chr2L 20022040 intergenic not near genes chr2L 20022148 intergenic not near genes chr2L 20022257 intergenic not near genes chr2L_8_20020001 chr2L_20020001 RAL-371_125b 600 chr2L 20124321 20124348 chr2L 20124438 20124476 8 125 5.0 5.0 5.0 1.3 155 chr2L 20124321 intergenic not near genes chr2L 20124398 intergenic not near genes chr2L 20124476 intergenic not near genes chr2L_8_20120001 chr2L_20120001 RAL-371_125b 601 chr2L 20229240 20229312 chr2L 20229414 20229486 15 173 4.5 2.5 3.5 3.3 246 chr2L 20229240 intergenic not near genes chr2L 20229363 intergenic not near genes chr2L 20229486 intergenic not near genes chr2L_15_20225001 chr2L_20225001 RAL-371_125b 602 chr2L 20272082 20272131 chr2L 20282843 20282892 copia 12 10760 7.0 3.0 5.0 2.0 10810 chr2L 20272082 intergenic not near genes chr2L 20277487 intergenic not near genes chr2L 20282892 intergenic not near genes chr2L_12_20275001 chr2L_20275001 RAL-371_125b 603 chr2L 20296468 20296534 chr2L 20296599 20296625 9 125 0.0 1.5 0.8 5.0 157 chr2L 20296468 intergenic CR43414 - chr2L 20296546 intergenic CR43414 - chr2L 20296625 intergenic CR43414 - chr2L_9_20295001 chr2L_20295001 RAL-371_125b 604 chr2L 20298791 20298851 chr2L 20298917 20298984 13 132 2.5 7.5 5.0 2.2 193 chr2L 20298791 intergenic not near genes chr2L 20298888 intergenic not near genes chr2L 20298984 intergenic not near genes chr2L_13_20295001 chr2L_20295001 RAL-371_125b 605 chr2L 20299968 20300012 chr2L 20300098 20300120 7 121 4.0 3.5 3.8 1.5 152 chr2L 20299968 intergenic not near genes chr2L 20300044 intergenic not near genes chr2L 20300120 intergenic not near genes chr2L_7_20300001 chr2L_20300001 RAL-371_125b 606 chr2L 20352702 20352762 chr2L 20352830 20352888 11 114 4.0 5.5 4.8 1.9 186 chr2L 20352702 intron RtGEF + chr2L 20352795 intron RtGEF + chr2L 20352888 intron RtGEF + chr2L_11_20350001 chr2L_20350001 RAL-371_125b 607 chr2L 20372199 20372240 chr2L 20372490 20372531 pogo 6 291 3.0 4.0 3.5 1.3 332 chr2L 20372199 intergenic Ugt37a1 - chr2L 20372365 intergenic Ugt37a1 - chr2L 20372531 exon Ugt37a1 - chr2L_6_20370001 chr2L_20370001 RAL-371_125b 608 chr2L 20383418 20383454 chr2L 20383539 20383593 7 138 7.0 3.0 5.0 1.2 175 chr2L 20383418 intergenic not near genes chr2L 20383506 intergenic not near genes chr2L 20383593 intergenic not near genes chr2L_7_20380001 chr2L_20380001 RAL-371_125b 609 chr2L 20396764 20396829 chr2L 20396885 20396955 7 124 4.5 1.5 3.0 1.8 191 chr2L 20396764 intron CG10947 - chr2L 20396860 intron CG10947 - chr2L 20396955 intron CG10947 - chr2L_7_20395001 chr2L_20395001 RAL-371_125b 610 chr2L 20498080 20498140 chr2L 20498345 20498405 9 263 4.5 4.5 4.5 1.6 325 chr2L 20498080 intergenic not near genes chr2L 20498242 intergenic not near genes chr2L 20498405 intergenic not near genes chr2L_9_20495001 chr2L_20495001 RAL-371_125b 611 chr2L 20498641 20498698 chr2L 20498790 20498847 14 149 2.5 1.5 2.0 4.7 206 chr2L 20498641 intergenic not near genes chr2L 20498744 intergenic not near genes chr2L 20498847 intergenic not near genes chr2L_14_20495001 chr2L_20495001 RAL-371_125b 612 chr2L 20568623 20568678 chr2L 20569062 20569118 X-element 10 440 3.0 2.0 2.5 2.9 495 chr2L 20568623 intron CR45347 + chr2L 20568870 intron CR45347 + chr2L 20569118 intron CR45347 + chr2L_10_20565001 chr2L_20565001 RAL-371_125b 613 chr2L 20572208 20572265 chr2L 20572348 20572384 9 134 5.0 3.5 4.2 1.7 176 chr2L 20572208 intron CR45347 + chr2L 20572296 intron CR45347 + chr2L 20572384 intron CR45347 + chr2L_9_20570001 chr2L_20570001 RAL-371_125b 614 chr2L 20576179 20576244 chr2L 20583697 20583748 blood 17 7517 2.5 5.0 3.8 3.5 7569 chr2L 20576179 intergenic CR45347 + chr2L 20579964 intergenic not near genes chr2L 20583748 3` UTR CR44909 - chr2L_17_20575001 chr2L_20575001 RAL-371_125b 615 chr2L 20597038 20597113 chr2L 20597164 20597219 10 125 4.5 2.0 3.2 2.4 181 chr2L 20597038 intron CR44909 - chr2L 20597128 intron CR44909 - chr2L 20597219 intron CR44909 - chr2L_10_20595001 chr2L_20595001 RAL-371_125b 616 chr2L 20601745 20601812 chr2L 20601873 20601940 7 128 2.0 1.0 1.5 2.8 195 chr2L 20601745 intron CR44909 - chr2L 20601842 intron CR44909 - chr2L 20601940 intron CR44909 - chr2L_7_20600001 chr2L_20600001 RAL-371_125b 617 chr2L 20602678 20602732 chr2L 20602816 20602870 6 138 0.0 4.5 2.2 1.9 192 chr2L 20602678 intron CR44909 - chr2L 20602774 intron CR44909 - chr2L 20602870 intron CR44909 - chr2L_6_20600001 chr2L_20600001 RAL-371_125b 618 chr2L 20607636 20607670 chr2L 20607729 20607758 8 105 3.0 4.5 3.8 1.7 122 chr2L 20607636 intron,3` UTR CR44909 -,CR43608 - chr2L 20607697 intron,3` UTR CR44909 -,CR43608 - chr2L 20607758 intron,3` UTR CR44909 -,CR43608 - chr2L_8_20605001 chr2L_20605001 RAL-371_125b 619 chr2L 20639458 20639513 chr2L 20639781 20639839 INE-1 4 325 5.5 3.0 4.2 0.8 381 chr2L 20639458 intergenic not near genes chr2L 20639648 intergenic CG31680 + chr2L 20639839 intergenic CG31680 + chr2L_4_20635001 chr2L_20635001 RAL-371_125b 620 chr2L 20643293 20643338 chr2L 20643475 20643520 9 182 3.5 3.5 3.5 2.0 227 chr2L 20643293 intergenic CG17470 -,phr6-4 - chr2L 20643406 3` UTR phr6-4 - chr2L 20643520 3` UTR phr6-4 - chr2L_9_20640001 chr2L_20640001 RAL-371_125b 621 chr2L 20804663 20804730 chr2L 20804798 20804865 12 134 4.0 4.5 4.2 2.3 202 chr2L 20804663 intron CG9328 + chr2L 20804764 intron CG9328 + chr2L 20804865 intron CG9328 + chr2L_12_20800001 chr2L_20800001 RAL-371_125b 622 chr2L 20821456 20821521 chr2L 20821652 20821719 12 196 6.5 1.0 3.8 2.5 263 chr2L 20821456 intergenic not near genes chr2L 20821588 intergenic not near genes chr2L 20821719 intergenic not near genes chr2L_12_20820001 chr2L_20820001 RAL-371_125b 623 chr2L 20891271 20891295 chr2L 20891413 20891437 8 141 6.0 8.5 7.2 1.0 166 chr2L 20891271 intron,intron CG43739 -,sky - chr2L 20891354 intron,intron CG43739 -,sky - chr2L 20891437 intron,intron CG43739 -,sky - chr2L_8_20890001 chr2L_20890001 RAL-371_125b 624 chr2L 20891520 20891539 chr2L 20896653 20896690 jockey 5 5146 5.0 5.0 5.0 0.8 5170 chr2L 20891520 intron,intron CG43739 -,sky - chr2L 20894105 intron,intron CG43739 -,sky - chr2L 20896690 intron,intron CG43739 -,sky - chr2L_5_20890001 chr2L_20890001 RAL-371_125b 625 chr2L 20922785 20922836 chr2L 20922921 20922979 6 132 3.5 1.0 2.2 1.9 194 chr2L 20922785 5` UTR Mtp - chr2L 20922882 intergenic Mtp - chr2L 20922979 intergenic Mtp - chr2L_6_20920001 chr2L_20920001 RAL-371_125b 626 chr2L 20922838 20922842 chr2L 20922920 20922976 4 120 3.0 1.0 2.0 1.3 138 chr2L 20922838 5` UTR Mtp - chr2L 20922907 intergenic Mtp - chr2L 20922976 intergenic Mtp - chr2L_4_20920001 chr2L_20920001 RAL-371_125b 627 chr2L 21020247 21020276 chr2L 21023974 21024003 NOF 5 3727 10.5 5.0 7.8 0.6 3756 chr2L 21020247 intron CG42238 - chr2L 21022125 intron CG42238 - chr2L 21024003 intron CG42238 - chr2L_5_21020001 chr2L_21020001 RAL-371_125b 628 chr2L 21020279 21020299 chr2L 21023967 21024026 NOF 6 3720 8.0 5.0 6.5 0.8 3747 chr2L 21020279 intron CG42238 - chr2L 21022152 intron CG42238 - chr2L 21024026 intron CG42238 - chr2L_6_21020001 chr2L_21020001 RAL-371_125b 629 chr2L 21041096 21041126 chr2L 21049407 21049437 Tirant 4 8308 8.5 5.0 6.8 0.5 8341 chr2L 21041096 intron CG42238 - chr2L 21045266 intron CG42238 - chr2L 21049437 intron CG42238 - chr2L_4_21045001 chr2L_21045001 RAL-371_125b 630 chr2L 21193304 21193368 chr2L 21193438 21193457 10 124 3.5 2.5 3.0 2.5 153 chr2L 21193304 intron Ret - chr2L 21193380 intron Ret - chr2L 21193457 intron Ret - chr2L_10_21190001 chr2L_21190001 RAL-371_125b 631 chr2L 21258962 21259038 chr2L 21259099 21259175 14 137 3.5 3.0 3.2 3.3 213 chr2L 21258962 3` UTR Hr39 + chr2L 21259068 3` UTR Hr39 + chr2L 21259175 3` UTR Hr39 + chr2L_14_21255001 chr2L_21255001 RAL-371_125b 632 chr2L 21262509 21262574 chr2L 21262644 21262709 11 135 3.5 1.5 2.5 3.1 200 chr2L 21262509 intergenic l(2)k14505 +,CG8671 + chr2L 21262609 intergenic l(2)k14505 +,CG8671 + chr2L 21262709 intergenic CG8671 +,l(2)k14505 + chr2L_11_21260001 chr2L_21260001 RAL-371_125b 633 chr2L 21276611 21276671 chr2L 21276733 21276799 13 125 3.5 3.0 3.2 3.1 188 chr2L 21276611 intron CG8671 + chr2L 21276705 intron CG8671 + chr2L 21276799 intron CG8671 + chr2L_13_21275001 chr2L_21275001 RAL-371_125b 634 chr2L 21323382 21323431 chr2L 21323520 21323569 11 138 5.5 3.0 4.2 2.1 187 chr2L 21323382 intergenic not near genes chr2L 21323476 intergenic not near genes chr2L 21323569 intergenic not near genes chr2L_11_21320001 chr2L_21320001 RAL-371_125b 635 chr2L 21347512 21347568 chr2L 21355034 21355088 blood 12 7521 3.0 4.5 3.8 2.5 7576 chr2L 21347512 intron Tsp39D + chr2L 21351300 intron Tsp39D + chr2L 21355088 intron Tsp39D + chr2L_12_21350001 chr2L_21350001 RAL-371_125b 636 chr2L 21596993 21597032 chr2L 21604787 21604826 roo 5 7790 1.5 2.5 2.0 1.7 7833 chr2L 21596993 intergenic not near genes chr2L 21600910 intergenic not near genes chr2L 21604826 intergenic not near genes chr2L_5_21600001 chr2L_21600001 RAL-371_125b 637 chr2L 21755448 21755515 chr2L 21755622 21755668 12 172 4.0 2.0 3.0 3.0 220 chr2L 21755448 intron step - chr2L 21755558 intron step - chr2L 21755668 intron step - chr2L_12_21755001 chr2L_21755001 RAL-371_125b 638 chr2L 21836355 21836404 chr2L 21836495 21836544 7 134 7.0 10.0 8.5 0.7 189 chr2L 21836355 3` UTR tsh + chr2L 21836450 3` UTR tsh + chr2L 21836544 3` UTR tsh + chr2L_7_21835001 chr2L_21835001 RAL-371_125b 639 chr2L 21855448 21855497 chr2L 21855585 21855634 9 137 1.5 2.0 1.8 3.2 186 chr2L 21855448 intron CR44917 + chr2L 21855541 intron CR44917 + chr2L 21855634 intron CR44917 + chr2L_9_21855001 chr2L_21855001 RAL-371_125b 640 chr2L 21859275 21859342 chr2L 21859405 21859472 12 128 3.0 5.0 4.0 2.4 197 chr2L 21859275 intron CR44917 + chr2L 21859374 intron CR44917 + chr2L 21859472 intron CR44917 + chr2L_12_21855001 chr2L_21855001 RAL-371_125b 641 chr2L 21961156 21961198 chr2L 21961342 21961415 11 208 2.0 4.5 3.2 2.6 259 chr2L 21961156 intergenic not near genes chr2L 21961286 intergenic not near genes chr2L 21961415 intergenic not near genes chr2L_11_21960001 chr2L_21960001 RAL-371_125b 642 chr2L 21981658 21981702 chr2L 21990873 21990912 roo 14 9211 5.5 6.5 6.0 2.0 9254 chr2L 21981658 exon CG2528 - chr2L 21986285 intron CG2528 - chr2L 21990912 exon CG2528 - chr2L_14_21985001 chr2L_21985001 RAL-371_125b 643 chr2L 22047206 22047256 chr2L 22047381 22047410 9 172 3.0 2.0 2.5 2.6 204 chr2L 22047206 intergenic not near genes chr2L 22047308 intergenic not near genes chr2L 22047410 intergenic not near genes chr2L_9_22045001 chr2L_22045001 RAL-371_125b 644 chr2L 22197845 22197905 chr2L 22198094 22198154 8 249 0.5 2.5 1.5 3.2 309 chr2L 22197845 intron Ir40a - chr2L 22198000 intron Ir40a - chr2L 22198154 intron Ir40a - chr2L_8_22195001 chr2L_22195001 RAL-371_125b 645 chr2L 22212093 22212163 chr2L 22212690 22212760 6 597 0.5 4.0 2.2 1.9 667 chr2L 22212093 intron Ir40a - chr2L 22212426 intron Ir40a - chr2L 22212760 exon Ir40a - chr2L_6_22210001 chr2L_22210001 RAL-371_125b 646 chr2L 22239382 22239446 chr2L 22239513 22239577 11 130 3.0 3.0 3.0 2.8 195 chr2L 22239382 intron CR43765 - chr2L 22239480 3` UTR CR43765 - chr2L 22239577 3` UTR CR43765 - chr2L_11_22235001 chr2L_22235001 RAL-371_125b 647 chr2L 22258566 22258635 chr2L 22260741 22260810 G6 5 2173 1.5 3.5 2.5 1.4 2244 chr2L 22258566 intergenic Tif-IA + chr2L 22259688 intergenic not near genes chr2L 22260810 intergenic not near genes chr2L_5_22255001 chr2L_22255001 RAL-371_125b 648 chr2L 22350222 22350243 chr2L 22350374 22350395 5 152 6.0 3.5 4.8 0.9 173 chr2L 22350222 intron CG17018 + chr2L 22350308 intron CG17018 + chr2L 22350395 intron CG17018 + chr2L_5_22350001 chr2L_22350001 RAL-371_125b 649 chr2L 22350259 22350289 chr2L 22350366 22350405 9 142 2.5 3.0 2.8 2.4 146 chr2L 22350259 intron CG17018 + chr2L 22350332 intron CG17018 + chr2L 22350405 intron CG17018 + chr2L_9_22350001 chr2L_22350001 RAL-371_125b 650 chr2L 22545930 22546001 chr2L 22546076 22546147 8 146 5.0 3.5 4.2 1.5 217 chr2L 22545930 intron CG17490 + chr2L 22546038 intron CG17490 + chr2L 22546147 intron CG17490 + chr2L_8_22545001 chr2L_22545001 RAL-371_125b 651 chr2L 22548885 22548936 chr2L 22550133 22550160 1360 8 1258 0.0 2.0 1.0 4.0 1275 chr2L 22548885 intergenic CG17490 + chr2L 22549522 intergenic not near genes chr2L 22550160 intergenic CG17493 + chr2L_8_22545001 chr2L_22545001 RAL-371_125b 652 chr2L 22581937 22581992 chr2L 22583776 22583832 S-element 9 1839 2.5 3.0 2.8 2.4 1895 chr2L 22581937 intron CG17494 + chr2L 22582884 intron CG17494 + chr2L 22583832 intron CG17494 + chr2L_9_22580001 chr2L_22580001 RAL-371_125b 653 chr2L 22676088 22676151 chr2L 22676376 22676439 7 288 0.5 2.5 1.5 2.8 351 chr2L 22676088 exon CG40006 - chr2L 22676264 intron CG40006 - chr2L 22676439 intron CG40006 - chr2L_7_22675001 chr2L_22675001 RAL-371_125b 654 chr2L 22693854 22693945 chr2L 22694010 22694082 11 137 0.0 3.0 1.5 4.4 228 chr2L 22693854 intron CG40006 - chr2L 22693968 intron CG40006 - chr2L 22694082 intron CG40006 - chr2L_11_22690001 chr2L_22690001 RAL-371_125b 655 chr2L 22776380 22776431 chr2L 22778219 22778270 S-element 13 1838 4.5 2.5 3.5 2.9 1890 chr2L 22776380 intergenic not near genes chr2L 22777325 intergenic not near genes chr2L 22778270 intergenic not near genes chr2L_13_22775001 chr2L_22775001 RAL-371_125b 656 chr2L 22983895 22983967 chr2L 22984021 22984093 6 125 4.0 4.5 4.2 1.2 198 chr2L 22983895 intron cta + chr2L 22983994 intron cta + chr2L 22984093 intron cta + chr2L_6_22980001 chr2L_22980001 RAL-371_125b 657 chr2L 23297053 23297070 chr2L 23297189 23297206 5 136 10.5 5.0 7.8 0.6 153 chr2L 23297053 intergenic not near genes chr2L 23297130 intergenic not near genes chr2L 23297206 intergenic not near genes chr2L_5_23295001 chr2L_23295001 RAL-371_125b 658 chr2L 23297074 23297118 chr2L 23297185 23297254 9 133 6.0 5.0 5.5 1.4 180 chr2L 23297074 intergenic not near genes chr2L 23297164 intergenic not near genes chr2L 23297254 intergenic not near genes chr2L_9_23295001 chr2L_23295001 RAL-371_125b 659 chr2R 469937 469975 chr2R 473206 473245 F-element 9 3278 1.0 5.5 3.2 2.1 3308 chr2R 469937 intergenic not near genes chr2R 471591 intergenic not near genes chr2R 473245 intergenic not near genes chr2R_9_470001 chr2R_470001 RAL-371_125b 660 chr2R 529315 529333 chr2R 537959 538008 Max-element 6 8668 6.5 7.5 7.0 0.8 8693 chr2R 529315 intron CG40378 + chr2R 533662 intron CG40378 + chr2R 538008 intron CG40378 + chr2R_6_530001 chr2R_530001 RAL-371_125b 661 chr2R 529336 529347 chr2R 537956 538022 Max-element 4 8661 5.5 7.0 6.2 0.6 8686 chr2R 529336 intron CG40378 + chr2R 533679 intron CG40378 + chr2R 538022 intron CG40378 + chr2R_4_530001 chr2R_530001 RAL-371_125b 662 chr2R 552715 552747 chr2R 553983 554005 1360 4 1262 13.5 17.5 15.5 0.2 1290 chr2R 552715 intron CG40378 + chr2R 553360 intron CG40378 + chr2R 554005 intron CG40378 + chr2R_4_550001 chr2R_550001 RAL-371_125b 663 chr2R 652209 652251 chr2R 652776 652835 5 582 7.0 10.5 8.8 0.5 626 chr2R 652209 intergenic not near genes chr2R 652522 intergenic not near genes chr2R 652835 intergenic not near genes chr2R_5_650001 chr2R_650001 RAL-371_125b 664 chr2R 1370124 1370162 chr2R 1370263 1370276 4 133 3.5 5.5 4.5 0.7 152 chr2R 1370124 intron,3` UTR l(2)41Ab +,CR44043 - chr2R 1370200 intron,3` UTR l(2)41Ab +,CR44043 - chr2R 1370276 intron,3` UTR l(2)41Ab +,CR44043 - chr2R_4_1370001 chr2R_1370001 RAL-371_125b 665 chr2R 1516563 1516602 chr2R 1521341 1521380 1731 11 4778 12.0 7.5 9.8 1.0 4817 chr2R 1516563 exon Maf1 - chr2R 1518972 intron Maf1 - chr2R 1521380 5` UTR Maf1 - chr2R_11_1515001 chr2R_1515001 RAL-371_125b 666 chr2R 1732808 1732837 chr2R 1733005 1733034 4 197 6.5 3.5 5.0 0.7 226 chr2R 1732808 intron CG41520 + chr2R 1732921 intron CG41520 + chr2R 1733034 intron CG41520 + chr2R_4_1730001 chr2R_1730001 RAL-371_125b 667 chr2R 2015090 2015154 chr2R 2015217 2015281 10 127 3.5 3.5 3.5 2.2 191 chr2R 2015090 intron CG17684 - chr2R 2015186 intron CG17684 - chr2R 2015281 intron CG17684 - chr2R_10_2015001 chr2R_2015001 RAL-371_125b 668 chr2R 2110471 2110496 chr2R 2118072 2118104 17.6 8 7607 4.5 4.5 4.5 1.5 7633 chr2R 2110471 intron CG17684 - chr2R 2114288 intron CG17684 - chr2R 2118104 intron CG17684 - chr2R_8_2110001 chr2R_2110001 RAL-371_125b 669 chr2R 2498953 2498985 chr2R 2508150 2508182 roo 6 9196 2.0 5.0 3.5 1.3 9229 chr2R 2498953 intron MFS17 - chr2R 2503568 intron MFS17 - chr2R 2508182 intron MFS17 - chr2R_6_2500001 chr2R_2500001 RAL-371_125b 670 chr2R 2875347 2875381 chr2R 2878912 2878946 HMS-Beagle 4 3565 15.0 10.5 12.8 0.3 3599 chr2R 2875347 intergenic not near genes chr2R 2877146 intergenic not near genes chr2R 2878946 intergenic not near genes chr2R_4_2875001 chr2R_2875001 RAL-371_125b 671 chr2R 3091357 3091374 chr2R 3092153 3092170 4 796 3.5 2.0 2.8 1.1 813 chr2R 3091357 intron CG42596 + chr2R 3091764 intron CG42596 + chr2R 3092170 intron CG42596 + chr2R_4_3090001 chr2R_3090001 RAL-371_125b 672 chr2R 3107697 3107725 chr2R 3108431 3108459 4 734 2.5 2.0 2.2 1.2 762 chr2R 3107697 intron CG42596 + chr2R 3108078 intron CG42596 + chr2R 3108459 intron CG42596 + chr2R_4_3105001 chr2R_3105001 RAL-371_125b 673 chr2R 3144041 3144067 chr2R 3393369 3393395 Doc 4 249328 15.5 4.0 9.8 0.4 249354 chr2R 3144041 intron CG42596 + chr2R 3268718 intergenic not near genes chr2R 3393395 intergenic not near genes chr2R_4_3265001 chr2R_3265001 RAL-371_125b 674 chr2R 3532581 3532619 chr2R 3536074 3536112 Doc 4 3492 0.5 2.0 1.2 1.8 3531 chr2R 3532581 intergenic not near genes chr2R 3534346 intergenic not near genes chr2R 3536112 intergenic not near genes chr2R_4_3530001 chr2R_3530001 RAL-371_125b 675 chr2R 3702642 3702659 chr2R 3702767 3702789 4 130 8.5 6.5 7.5 0.5 147 chr2R 3702642 intergenic not near genes chr2R 3702716 intergenic not near genes chr2R 3702789 intergenic not near genes chr2R_4_3700001 chr2R_3700001 RAL-371_125b 676 chr2R 3927661 3927715 chr2R 3927791 3927862 15 146 4.5 2.5 3.5 3.3 201 chr2R 3927661 intron uex - chr2R 3927762 intron uex - chr2R 3927862 intron uex - chr2R_15_3925001 chr2R_3925001 RAL-371_125b 677 chr2R 4015286 4015340 chr2R 4015509 4015561 13 223 2.5 3.5 3.0 3.2 275 chr2R 4015286 intron Haspin + chr2R 4015424 intron Haspin + chr2R 4015561 intron Haspin + chr2R_13_4015001 chr2R_4015001 RAL-371_125b 678 chr2R 4191305 4191368 chr2R 4191438 4191501 7 133 2.5 5.5 4.0 1.4 196 chr2R 4191305 intergenic not near genes chr2R 4191403 intergenic not near genes chr2R 4191501 intergenic not near genes chr2R_7_4190001 chr2R_4190001 RAL-371_125b 679 chr2R 4312912 4312977 chr2R 4313046 4313111 13 134 4.0 2.0 3.0 3.2 199 chr2R 4312912 intergenic not near genes chr2R 4313012 intergenic not near genes chr2R 4313111 intergenic not near genes chr2R_13_4310001 chr2R_4310001 RAL-371_125b 680 chr2R 4351579 4351597 chr2R 4352487 4352505 4 908 12.5 6.0 9.2 0.4 926 chr2R 4351579 intron Gprk1 - chr2R 4352042 intron Gprk1 - chr2R 4352505 intron Gprk1 - chr2R_4_4350001 chr2R_4350001 RAL-371_125b 681 chr2R 4622913 4622946 chr2R 4624117 4624155 1360 4 1208 5.0 4.5 4.8 0.7 1242 chr2R 4622913 intergenic CR44101 - chr2R 4623534 intergenic not near genes chr2R 4624155 intergenic not near genes chr2R_4_4620001 chr2R_4620001 RAL-371_125b 682 chr2R 4622952 4622976 chr2R 4624109 4624184 1360 8 1198 1.5 3.5 2.5 2.3 1232 chr2R 4622952 intergenic CR44101 - chr2R 4623568 intergenic not near genes chr2R 4624184 intergenic not near genes chr2R_8_4620001 chr2R_4620001 RAL-371_125b 683 chr2R 4688102 4688123 chr2R 4688245 4688266 6 143 2.0 5.5 3.8 1.2 164 chr2R 4688102 intergenic not near genes chr2R 4688184 intergenic not near genes chr2R 4688266 intergenic not near genes chr2R_6_4685001 chr2R_4685001 RAL-371_125b 684 chr2R 4783374 4783444 chr2R 4783502 4783552 11 120 5.0 4.0 4.5 2.0 178 chr2R 4783374 intergenic not near genes chr2R 4783463 intergenic not near genes chr2R 4783552 intergenic not near genes chr2R_11_4780001 chr2R_4780001 RAL-371_125b 685 chr2R 4819801 4819839 chr2R 4819940 4819961 9 135 4.0 2.5 3.2 2.1 160 chr2R 4819801 exon CG17528 - chr2R 4819881 exon CG17528 - chr2R 4819961 intron CG17528 - chr2R_9_4815001 chr2R_4815001 RAL-371_125b 686 chr2R 5125217 5125257 chr2R 5125585 5125625 7 362 3.5 4.0 3.8 1.5 408 chr2R 5125217 intron gus - chr2R 5125421 intron gus - chr2R 5125625 intron gus - chr2R_7_5125001 chr2R_5125001 RAL-371_125b 687 chr2R 5237303 5237340 chr2R 5237435 5237472 9 131 6.0 0.0 3.0 2.2 169 chr2R 5237303 intron Nipped-A - chr2R 5237388 intron Nipped-A - chr2R 5237472 intron Nipped-A - chr2R_9_5235001 chr2R_5235001 RAL-371_125b 688 chr2R 5255468 5255505 chr2R 5256694 5256761 20 1228 5.0 37.5 21.2 0.9 1293 chr2R 5255468 intergenic CR41443 + chr2R 5256114 intergenic not near genes chr2R 5256761 intergenic not near genes chr2R_20_5255001 chr2R_5255001 RAL-371_125b 689 chr2R 5363478 5363502 chr2R 5363606 5363630 5 128 5.0 6.5 5.8 0.7 152 chr2R 5363478 5` UTR CR42646 + chr2R 5363554 intron CR42646 + chr2R 5363630 intron CR42646 + chr2R_5_5360001 chr2R_5360001 RAL-371_125b 690 chr2R 5399112 5399170 chr2R 5399260 5399318 8 148 5.5 4.0 4.8 1.4 206 chr2R 5399112 intergenic not near genes chr2R 5399215 intergenic not near genes chr2R 5399318 intergenic not near genes chr2R_8_5395001 chr2R_5395001 RAL-371_125b 691 chr2R 5417951 5418013 chr2R 5420633 5420695 Burdock 11 2682 4.0 2.5 3.2 2.6 2744 chr2R 5417951 intron laccase2 + chr2R 5419323 intron laccase2 + chr2R 5420695 intron laccase2 + chr2R_11_5415001 chr2R_5415001 RAL-371_125b 692 chr2R 5472318 5472386 chr2R 5472462 5472511 15 139 2.5 5.0 3.8 3.1 193 chr2R 5472318 intron CG30440 - chr2R 5472414 intron CG30440 - chr2R 5472511 intron CG30440 - chr2R_15_5470001 chr2R_5470001 RAL-371_125b 693 chr2R 5476303 5476356 chr2R 5476897 5476921 10 590 3.5 2.0 2.8 2.6 618 chr2R 5476303 intron CG30440 - chr2R 5476612 intron CG30440 - chr2R 5476921 intron CG30440 - chr2R_10_5475001 chr2R_5475001 RAL-371_125b 694 chr2R 5491621 5491658 chr2R 5491764 5491801 8 143 4.0 3.0 3.5 1.8 180 chr2R 5491621 intron CG30440 - chr2R 5491711 intron CG30440 - chr2R 5491801 intron CG30440 - chr2R_8_5490001 chr2R_5490001 RAL-371_125b 695 chr2R 5491667 5491688 chr2R 5491760 5491830 5 133 1.5 2.5 2.0 1.7 163 chr2R 5491667 intron CG30440 - chr2R 5491748 intron CG30440 - chr2R 5491830 intron CG30440 - chr2R_5_5490001 chr2R_5490001 RAL-371_125b 696 chr2R 5509506 5509547 chr2R 5509652 5509693 13 146 2.0 7.5 4.8 2.2 187 chr2R 5509506 intron CG30438 + chr2R 5509600 intron CG30438 + chr2R 5509693 intron CG30438 + chr2R_13_5505001 chr2R_5505001 RAL-371_125b 697 chr2R 5604853 5604908 chr2R 5604979 5605034 7 126 4.5 2.5 3.5 1.6 181 chr2R 5604853 intergenic Fis1 - chr2R 5604944 intergenic Fis1 - chr2R 5605034 intergenic Fis1 - chr2R_7_5600001 chr2R_5600001 RAL-371_125b 698 chr2R 5653326 5653360 chr2R 5653475 5653509 6 148 3.0 4.0 3.5 1.3 183 chr2R 5653326 intergenic CG1344 + chr2R 5653418 intergenic CG1344 + chr2R 5653509 intergenic CG1344 + chr2R_6_5650001 chr2R_5650001 RAL-371_125b 699 chr2R 5664260 5664315 chr2R 5664399 5664460 13 143 4.0 4.5 4.2 2.5 200 chr2R 5664260 5` UTR CR45472 + chr2R 5664360 intron CR45472 + chr2R 5664460 intron CR45472 + chr2R_13_5660001 chr2R_5660001 RAL-371_125b 700 chr2R 5710615 5710671 chr2R 5710742 5710798 5 126 2.0 5.0 3.5 1.1 183 chr2R 5710615 intron ap - chr2R 5710706 intron ap - chr2R 5710798 intron ap - chr2R_5_5710001 chr2R_5710001 RAL-371_125b 701 chr2R 5772495 5772793 chr2R 5772639 5772925 13 137 5.0 5.5 5.2 2.1 430 chr2R 5772495 3` UTR Gp210 + chr2R 5772710 3` UTR Gp210 + chr2R 5772925 3` UTR Gp210 + chr2R_13_5770001 chr2R_5770001 RAL-371_125b 702 chr2R 5772795 5772856 chr2R 5772927 5772988 12 132 2.0 1.0 1.5 4.8 193 chr2R 5772795 3` UTR Gp210 + chr2R 5772892 3` UTR Gp210 + chr2R 5772988 3` UTR Gp210 + chr2R_12_5770001 chr2R_5770001 RAL-371_125b 703 chr2R 5790433 5790467 chr2R 5790568 5790602 6 135 3.5 5.5 4.5 1.1 169 chr2R 5790433 intergenic not near genes chr2R 5790518 intergenic not near genes chr2R 5790602 intergenic not near genes chr2R_6_5790001 chr2R_5790001 RAL-371_125b 704 chr2R 5859941 5859983 chr2R 5860103 5860145 9 162 4.0 5.0 4.5 1.6 204 chr2R 5859941 3` UTR dpr12 + chr2R 5860043 3` UTR dpr12 + chr2R 5860145 3` UTR dpr12 + chr2R_9_5860001 chr2R_5860001 RAL-371_125b 705 chr2R 5869231 5869299 chr2R 5874357 5874424 flea 11 5126 4.0 4.5 4.2 2.1 5193 chr2R 5869231 intergenic not near genes chr2R 5871828 intergenic not near genes chr2R 5874424 intergenic not near genes chr2R_11_5870001 chr2R_5870001 RAL-371_125b 706 chr2R 5878886 5878950 chr2R 5879010 5879080 12 129 1.5 2.5 2.0 4.0 194 chr2R 5878886 intergenic CG44438 - chr2R 5878983 intergenic CG44438 - chr2R 5879080 intergenic CG44438 - chr2R_12_5875001 chr2R_5875001 RAL-371_125b 707 chr2R 5884057 5884096 chr2R 5885948 5885987 7 1891 3.0 2.0 2.5 2.0 1930 chr2R 5884057 intergenic not near genes chr2R 5885022 5` UTR CR44125 + chr2R 5885987 5` UTR CR44125 + chr2R_7_5885001 chr2R_5885001 RAL-371_125b 708 chr2R 5902119 5902184 chr2R 5909728 5909793 17.6 10 7609 1.5 1.0 1.2 4.5 7674 chr2R 5902119 5` UTR CG43366 + chr2R 5905956 intron CG43366 + chr2R 5909793 intron CG43366 + chr2R_10_5905001 chr2R_5905001 RAL-371_125b 709 chr2R 5932756 5932810 chr2R 5932879 5932939 10 128 3.5 7.5 5.5 1.5 183 chr2R 5932756 intergenic not near genes chr2R 5932848 intergenic not near genes chr2R 5932939 intergenic not near genes chr2R_10_5930001 chr2R_5930001 RAL-371_125b 710 chr2R 5933043 5933107 chr2R 5933322 5933386 15 276 4.5 3.5 4.0 3.0 343 chr2R 5933043 intergenic not near genes chr2R 5933214 intergenic not near genes chr2R 5933386 intergenic not near genes chr2R_15_5930001 chr2R_5930001 RAL-371_125b 711 chr2R 5939623 5939670 chr2R 5940870 5940897 INE-1 13 1244 1.5 6.0 3.8 2.7 1274 chr2R 5939623 intergenic not near genes chr2R 5940260 intergenic not near genes chr2R 5940897 intergenic not near genes chr2R_13_5940001 chr2R_5940001 RAL-371_125b 712 chr2R 6037419 6037474 chr2R 6037554 6037609 12 135 5.0 3.0 4.0 2.4 190 chr2R 6037419 intron CG14591 - chr2R 6037514 intron CG14591 - chr2R 6037609 intron CG14591 - chr2R_12_6035001 chr2R_6035001 RAL-371_125b 713 chr2R 6065752 6065775 chr2R 6065874 6065937 6 150 6.5 5.0 5.8 0.9 185 chr2R 6065752 intron CCHa2-R + chr2R 6065844 intron CCHa2-R + chr2R 6065937 exon CCHa2-R + chr2R_6_6065001 chr2R_6065001 RAL-371_125b 714 chr2R 6088322 6088388 chr2R 6088465 6088531 12 143 4.0 6.5 5.2 1.9 209 chr2R 6088322 intergenic not near genes chr2R 6088426 intergenic not near genes chr2R 6088531 intergenic not near genes chr2R_12_6085001 chr2R_6085001 RAL-371_125b 715 chr2R 6096722 6096748 chr2R 6101909 6101938 BS 4 5218 4.0 4.0 4.0 0.8 5216 chr2R 6096722 intron EcR - chr2R 6099330 intron EcR - chr2R 6101938 intron EcR - chr2R_4_6095001 chr2R_6095001 RAL-371_125b 716 chr2R 6108639 6108697 chr2R 6108797 6108855 14 153 6.0 4.5 5.2 2.3 216 chr2R 6108639 intron EcR - chr2R 6108747 intron EcR - chr2R 6108855 intron EcR - chr2R_14_6105001 chr2R_6105001 RAL-371_125b 717 chr2R 6168169 6168210 chr2R 6168291 6168342 10 131 2.5 4.5 3.5 2.2 173 chr2R 6168169 intron EcR - chr2R 6168256 intron EcR - chr2R 6168342 intron EcR - chr2R_10_6165001 chr2R_6165001 RAL-371_125b 718 chr2R 6178070 6178137 chr2R 6178246 6178313 16 176 3.0 1.0 2.0 5.3 243 chr2R 6178070 intergenic not near genes chr2R 6178192 intergenic not near genes chr2R 6178313 intergenic not near genes chr2R_16_6175001 chr2R_6175001 RAL-371_125b 719 chr2R 6247767 6247836 chr2R 6247890 6247964 14 127 2.5 2.0 2.2 4.4 197 chr2R 6247767 intron Pld + chr2R 6247866 intron Pld + chr2R 6247964 intron Pld + chr2R_14_6245001 chr2R_6245001 RAL-371_125b 720 chr2R 6494515 6494532 chr2R 6499327 6499344 F-element 4 4812 3.5 2.0 2.8 1.1 4829 chr2R 6494515 intergenic not near genes chr2R 6496930 intergenic not near genes chr2R 6499344 intergenic not near genes chr2R_4_6495001 chr2R_6495001 RAL-371_125b 721 chr2R 6500922 6500985 chr2R 6501058 6501123 14 143 3.0 5.0 4.0 2.8 201 chr2R 6500922 intergenic not near genes chr2R 6501022 intergenic not near genes chr2R 6501123 intergenic not near genes chr2R_14_6500001 chr2R_6500001 RAL-371_125b 722 chr2R 6530727 6530785 chr2R 6530857 6530915 10 130 3.0 3.5 3.2 2.4 188 chr2R 6530727 intron jing + chr2R 6530821 intron jing + chr2R 6530915 intron jing + chr2R_10_6530001 chr2R_6530001 RAL-371_125b 723 chr2R 6559068 6559132 chr2R 6559195 6559238 12 123 3.0 7.5 5.2 1.9 170 chr2R 6559068 intron jing + chr2R 6559153 intron jing + chr2R 6559238 intron jing + chr2R_12_6555001 chr2R_6555001 RAL-371_125b 724 chr2R 6579760 6579797 chr2R 6584897 6584934 flea 9 5137 1.0 2.5 1.8 3.2 5174 chr2R 6579760 intron jing + chr2R 6582347 intron jing + chr2R 6584934 intron jing + chr2R_9_6580001 chr2R_6580001 RAL-371_125b 725 chr2R 6597832 6597903 chr2R 6597970 6597981 9 129 4.0 7.5 5.8 1.3 149 chr2R 6597832 intron jing + chr2R 6597906 intron jing + chr2R 6597981 intron jing + chr2R_9_6595001 chr2R_6595001 RAL-371_125b 726 chr2R 6607884 6607952 chr2R 6608036 6608104 11 152 4.0 5.5 4.8 1.9 220 chr2R 6607884 intron jing + chr2R 6607994 intron jing + chr2R 6608104 intron jing + chr2R_11_6605001 chr2R_6605001 RAL-371_125b 727 chr2R 6676940 6676989 chr2R 6677082 6677131 10 138 3.5 3.5 3.5 2.2 191 chr2R 6676940 intron CG9422 + chr2R 6677036 intron,3` UTR CG9422 +,Tdc1 - chr2R 6677131 intron,3` UTR CG9422 +,Tdc1 - chr2R_10_6675001 chr2R_6675001 RAL-371_125b 728 chr2R 6699555 6699611 chr2R 6699690 6699746 9 135 5.0 3.0 4.0 1.8 191 chr2R 6699555 intergenic Rab2 + chr2R 6699650 intergenic Rab2 + chr2R 6699746 intergenic Rab2 +,CG3409 -,CG45092 - chr2R_9_6695001 chr2R_6695001 RAL-371_125b 729 chr2R 6706947 6706993 chr2R 6707258 6707302 5 311 2.0 5.5 3.8 1.0 355 chr2R 6706947 intron,intron CG3409 -,CG45092 - chr2R 6707124 intron,intron CG3409 -,CG45092 - chr2R 6707302 intron,intron CG3409 -,CG45092 - chr2R_5_6705001 chr2R_6705001 RAL-371_125b 730 chr2R 6712539 6712600 chr2R 6712686 6712747 18 142 4.5 3.0 3.8 3.8 208 chr2R 6712539 intron,intron CG3409 -,CG45092 - chr2R 6712643 intron,intron CG3409 -,CG45092 - chr2R 6712747 intron,intron CG3409 -,CG45092 - chr2R_18_6710001 chr2R_6710001 RAL-371_125b 731 chr2R 6738805 6738877 chr2R 6738929 6739009 17 128 3.5 3.0 3.2 4.0 204 chr2R 6738805 intron l(2)01289 - chr2R 6738907 intron l(2)01289 - chr2R 6739009 intron l(2)01289 - chr2R_17_6735001 chr2R_6735001 RAL-371_125b 732 chr2R 6841239 6841292 chr2R 6841397 6841448 6 156 3.0 2.0 2.5 1.7 209 chr2R 6841239 intergenic CR44166 + chr2R 6841344 intergenic CR44166 + chr2R 6841448 intergenic CR44166 + chr2R_6_6840001 chr2R_6840001 RAL-371_125b 733 chr2R 6876173 6876219 chr2R 6876305 6876351 10 131 6.0 5.0 5.5 1.5 178 chr2R 6876173 5` UTR,intron CR44169 +,Spn42Da - chr2R 6876262 intron,intron CR44169 +,Spn42Da - chr2R 6876351 5` UTR,intron CR44169 +,Spn42Da - chr2R_10_6875001 chr2R_6875001 RAL-371_125b 734 chr2R 6895369 6895422 chr2R 6895494 6895501 10 122 4.5 4.5 4.5 1.8 132 chr2R 6895369 intron CG30158 + chr2R 6895435 intron CG30158 + chr2R 6895501 intron CG30158 + chr2R_10_6895001 chr2R_6895001 RAL-371_125b 735 chr2R 6964113 6964277 chr2R 6964251 6964404 18 134 0.0 0.0 0.0 18.0 291 chr2R 6964113 intron,intron mim -,CheB42c - chr2R 6964258 intron,intron mim -,CheB42c - chr2R 6964404 intron,intron mim -,CheB42c - chr2R_18_6960001 chr2R_6960001 RAL-371_125b 736 chr2R 7180974 7181016 chr2R 7181100 7181142 6 124 3.0 6.5 4.8 1.0 168 chr2R 7180974 intron pk + chr2R 7181058 intron pk + chr2R 7181142 intron pk + chr2R_6_7180001 chr2R_7180001 RAL-371_125b 737 chr2R 7235781 7235844 chr2R 7240923 7240946 jockey 13 5131 5.5 0.5 3.0 3.2 5165 chr2R 7235781 intergenic not near genes chr2R 7238364 intergenic not near genes chr2R 7240946 intergenic not near genes chr2R_13_7235001 chr2R_7235001 RAL-371_125b 738 chr2R 7252446 7252528 chr2R 7253259 7253301 14 802 3.0 3.0 3.0 3.5 855 chr2R 7252446 intergenic not near genes chr2R 7252874 intergenic not near genes chr2R 7253301 intergenic not near genes chr2R_14_7250001 chr2R_7250001 RAL-371_125b 739 chr2R 7254564 7254596 chr2R 7254690 7254690 6 119 6.0 4.5 5.2 1.0 126 chr2R 7254564 intergenic CR45280 + chr2R 7254627 5` UTR CR45280 + chr2R 7254690 5` UTR CR45280 + chr2R_6_7250001 chr2R_7250001 RAL-371_125b 740 chr2R 7328095 7328137 chr2R 7328256 7328298 8 161 0.5 8.0 4.2 1.5 203 chr2R 7328095 intron,intron Dscam1 -,CR45129 + chr2R 7328196 intron,intron Dscam1 -,CR45129 + chr2R 7328298 intron,intron Dscam1 -,CR45129 + chr2R_8_7325001 chr2R_7325001 RAL-371_125b 741 chr2R 7389561 7389583 chr2R 7389691 7389700 7 144 4.0 6.5 5.2 1.1 139 chr2R 7389561 intron CG11107 + chr2R 7389630 intron CG11107 + chr2R 7389700 intron CG11107 + chr2R_7_7385001 chr2R_7385001 RAL-371_125b 742 chr2R 7417872 7418162 chr2R 7418008 7418291 22 130 3.0 7.5 5.2 3.5 419 chr2R 7417872 intergenic not near genes chr2R 7418082 intergenic not near genes chr2R 7418291 intergenic not near genes chr2R_22_7415001 chr2R_7415001 RAL-371_125b 743 chr2R 7434863 7434908 chr2R 7439213 7439259 Juan 5 4351 3.5 9.0 6.2 0.7 4396 chr2R 7434863 3` UTR so + chr2R 7437061 intergenic not near genes chr2R 7439259 intergenic not near genes chr2R_5_7435001 chr2R_7435001 RAL-371_125b 744 chr2R 7551638 7551705 chr2R 7551779 7551846 23 140 4.5 4.5 4.5 4.2 208 chr2R 7551638 intron Corin + chr2R 7551742 intron Corin + chr2R 7551846 intron Corin + chr2R_23_7550001 chr2R_7550001 RAL-371_125b 745 chr2R 7608380 7608423 chr2R 7613633 7613674 I-element 5 5252 3.0 0.0 1.5 2.0 5294 chr2R 7608380 intron CG1358 - chr2R 7611027 intron CG1358 - chr2R 7613674 intron CG1358 - chr2R_5_7610001 chr2R_7610001 RAL-371_125b 746 chr2R 7639315 7639326 chr2R 7639455 7639466 4 140 5.0 2.0 3.5 0.9 151 chr2R 7639315 intron CG43340 + chr2R 7639390 intron CG43340 + chr2R 7639466 intron CG43340 + chr2R_4_7635001 chr2R_7635001 RAL-371_125b 747 chr2R 7815645 7815680 chr2R 7822164 7822189 Burdock 5 6517 3.5 0.0 1.8 1.8 6544 chr2R 7815645 intergenic CG1882 + chr2R 7818917 intergenic not near genes chr2R 7822189 3` UTR cathD - chr2R_5_7815001 chr2R_7815001 RAL-371_125b 748 chr2R 7842150 7842218 chr2R 7842288 7842356 17 137 6.0 3.0 4.5 3.1 206 chr2R 7842150 intron Dgk - chr2R 7842253 intron Dgk - chr2R 7842356 intron Dgk - chr2R_17_7840001 chr2R_7840001 RAL-371_125b 749 chr2R 7869147 7869220 chr2R 7873983 7873983 Doc 11 4830 2.5 4.5 3.5 2.4 4836 chr2R 7869147 intron Dgk - chr2R 7871565 intron Dgk - chr2R 7873983 intron Dgk - chr2R_11_7870001 chr2R_7870001 RAL-371_125b 750 chr2R 7915675 7915740 chr2R 7915817 7915882 10 142 4.5 3.5 4.0 2.0 207 chr2R 7915675 intron CG12159 - chr2R 7915778 intron CG12159 - chr2R 7915882 intron CG12159 - chr2R_10_7915001 chr2R_7915001 RAL-371_125b 751 chr2R 8015614 8015663 chr2R 8017687 8017726 7 2066 5.5 2.5 4.0 1.4 2112 chr2R 8015614 intergenic mir-4981 + chr2R 8016670 intergenic not near genes chr2R 8017726 intergenic not near genes chr2R_7_8015001 chr2R_8015001 RAL-371_125b 752 chr2R 8067029 8067085 chr2R 8067163 8067219 15 133 2.0 5.0 3.5 3.3 190 chr2R 8067029 intron CG17977 - chr2R 8067124 intron CG17977 - chr2R 8067219 exon CG17977 - chr2R_15_8065001 chr2R_8065001 RAL-371_125b 753 chr2R 8089203 8089286 chr2R 8089339 8089418 12 134 1.5 5.0 3.2 2.9 215 chr2R 8089203 exon sut2 + chr2R 8089310 intergenic sut2 +,sut3 + chr2R 8089418 intergenic sut3 +,sut2 + chr2R_12_8085001 chr2R_8085001 RAL-371_125b 754 chr2R 8209580 8209619 chr2R 8209684 8209704 11 109 5.0 5.0 5.0 1.8 124 chr2R 8209580 exon LRP1 + chr2R 8209642 intron LRP1 + chr2R 8209704 intron LRP1 + chr2R_11_8205001 chr2R_8205001 RAL-371_125b 755 chr2R 8218489 8218521 chr2R 8218642 8218674 13 152 10.5 10.0 10.2 1.2 185 chr2R 8218489 exon LRP1 + chr2R 8218582 intron LRP1 + chr2R 8218674 intron LRP1 + chr2R_13_8215001 chr2R_8215001 RAL-371_125b 756 chr2R 8305460 8305505 chr2R 8305594 8305639 5 131 3.0 3.5 3.2 1.2 179 chr2R 8305460 intergenic CR44447 + chr2R 8305550 intergenic CR44447 + chr2R 8305639 intergenic not near genes chr2R_5_8305001 chr2R_8305001 RAL-371_125b 757 chr2R 8330827 8330885 chr2R 8331363 8331421 roo 9 535 3.0 3.5 3.2 2.1 594 chr2R 8330827 intron pdm3 + chr2R 8331124 intron pdm3 + chr2R 8331421 intron pdm3 + chr2R_9_8330001 chr2R_8330001 RAL-371_125b 758 chr2R 8339167 8339195 chr2R 8339315 8339318 5 139 5.0 5.0 5.0 0.8 151 chr2R 8339167 intron pdm3 + chr2R 8339242 intron pdm3 + chr2R 8339318 intron pdm3 + chr2R_5_8335001 chr2R_8335001 RAL-371_125b 759 chr2R 8398200 8398241 chr2R 8402989 8403027 Doc 5 4800 4.0 4.0 4.0 1.0 4827 chr2R 8398200 intron CG2121 - chr2R 8400614 intron CG2121 - chr2R 8403027 intron CG2121 - chr2R_5_8400001 chr2R_8400001 RAL-371_125b 760 chr2R 8447527 8447597 chr2R 8448654 8448724 15 1125 4.0 6.0 5.0 2.5 1197 chr2R 8447527 exon Cyp4e1 + chr2R 8448126 exon Cyp4e1 + chr2R 8448724 exon Cyp4e1 + chr2R_15_8445001 chr2R_8445001 RAL-371_125b 761 chr2R 8454940 8455008 chr2R 8455833 8455901 16 893 27.0 25.5 26.2 0.6 961 chr2R 8454940 exon Mal-A2 + chr2R 8455420 exon Mal-A2 + chr2R 8455901 intergenic Mal-A3 -,Mal-A2 + chr2R_16_8455001 chr2R_8455001 RAL-371_125b 762 chr2R 8483923 8483984 chr2R 8484049 8484110 9 124 3.5 4.0 3.8 1.9 187 chr2R 8483923 intron mtt - chr2R 8484016 intron mtt - chr2R 8484110 intron mtt - chr2R_9_8480001 chr2R_8480001 RAL-371_125b 763 chr2R 8522498 8522517 chr2R 8522612 8522646 4 124 4.0 6.0 5.0 0.7 148 chr2R 8522498 5` UTR mtt - chr2R 8522572 5` UTR mtt - chr2R 8522646 5` UTR mtt - chr2R_4_8520001 chr2R_8520001 RAL-371_125b 764 chr2R 8536166 8536222 chr2R 8536448 8536504 6 281 3.5 3.0 3.2 1.4 338 chr2R 8536166 intergenic not near genes chr2R 8536335 intergenic not near genes chr2R 8536504 intergenic not near genes chr2R_6_8535001 chr2R_8535001 RAL-371_125b 765 chr2R 8565998 8566050 chr2R 8567000 8567052 1360 18 1001 6.0 8.0 7.0 2.2 1054 chr2R 8565998 5` UTR Cyp6a14 - chr2R 8566525 5` UTR Cyp6a14 - chr2R 8567052 5` UTR Cyp6a14 - chr2R_18_8565001 chr2R_8565001 RAL-371_125b 766 chr2R 8568710 8568733 chr2R 8568843 8568866 6 133 2.5 3.0 2.8 1.6 156 chr2R 8568710 intergenic not near genes chr2R 8568788 intergenic not near genes chr2R 8568866 intergenic not near genes chr2R_6_8565001 chr2R_8565001 RAL-371_125b 767 chr2R 8568735 8568769 chr2R 8568838 8568902 6 128 1.5 3.0 2.2 1.9 167 chr2R 8568735 intergenic not near genes chr2R 8568818 intergenic not near genes chr2R 8568902 intergenic not near genes chr2R_6_8565001 chr2R_8565001 RAL-371_125b 768 chr2R 8569143 8569189 chr2R 8569506 8569552 11 362 8.5 3.5 6.0 1.6 409 chr2R 8569143 intergenic not near genes chr2R 8569348 intergenic not near genes chr2R 8569552 intergenic not near genes chr2R_11_8565001 chr2R_8565001 RAL-371_125b 769 chr2R 8589743 8589780 chr2R 8589881 8589924 13 156 7.5 4.0 5.8 1.9 181 chr2R 8589743 intergenic not near genes chr2R 8589834 intergenic not near genes chr2R 8589924 intergenic not near genes chr2R_13_8585001 chr2R_8585001 RAL-371_125b 770 chr2R 8612531 8612593 chr2R 8612658 8612720 10 127 4.5 1.5 3.0 2.5 189 chr2R 8612531 intron CG8642 - chr2R 8612626 intron CG8642 - chr2R 8612720 intron CG8642 - chr2R_10_8610001 chr2R_8610001 RAL-371_125b 771 chr2R 8654136 8654156 chr2R 8654262 8654288 6 131 10.0 0.0 5.0 1.0 152 chr2R 8654136 intron ptc + chr2R 8654212 intron ptc + chr2R 8654288 intron ptc + chr2R_6_8650001 chr2R_8650001 RAL-371_125b 772 chr2R 8671750 8671798 chr2R 8671877 8671925 10 127 4.5 4.0 4.2 1.9 175 chr2R 8671750 intron Acsl + chr2R 8671838 intron Acsl + chr2R 8671925 intron Acsl + chr2R_10_8670001 chr2R_8670001 RAL-371_125b 773 chr2R 8671807 8671809 chr2R 8671864 8671926 7 87 5.5 4.0 4.8 1.2 119 chr2R 8671807 intron Acsl + chr2R 8671866 intron Acsl + chr2R 8671926 intron Acsl + chr2R_7_8670001 chr2R_8670001 RAL-371_125b 774 chr2R 8689908 8689977 chr2R 8690045 8690114 13 134 4.0 0.5 2.2 4.1 206 chr2R 8689908 intergenic not near genes chr2R 8690011 intergenic not near genes chr2R 8690114 intergenic not near genes chr2R_13_8690001 chr2R_8690001 RAL-371_125b 775 chr2R 8722724 8722787 chr2R 8723015 8723078 pogo 7 282 4.0 2.5 3.2 1.7 354 chr2R 8722724 intron CG14767 - chr2R 8722901 intron CG14767 - chr2R 8723078 intron CG14767 - chr2R_7_8720001 chr2R_8720001 RAL-371_125b 776 chr2R 8742640 8742699 chr2R 8742774 8742847 11 135 1.5 2.5 2.0 3.7 207 chr2R 8742640 intron CG8740 + chr2R 8742744 intron CG8740 + chr2R 8742847 intron CG8740 + chr2R_11_8740001 chr2R_8740001 RAL-371_125b 777 chr2R 8808241 8808309 chr2R 8808370 8808390 14 125 0.0 4.5 2.2 4.4 149 chr2R 8808241 intron sns + chr2R 8808316 intron sns + chr2R 8808390 intron sns + chr2R_14_8805001 chr2R_8805001 RAL-371_125b 778 chr2R 8964523 8964578 chr2R 8964945 8964985 6 420 1.5 2.5 2.0 2.0 462 chr2R 8964523 intron CG8216 - chr2R 8964754 intron CG8216 - chr2R 8964985 intron CG8216 - chr2R_6_8960001 chr2R_8960001 RAL-371_125b 779 chr2R 8967409 8967693 chr2R 8967606 8967834 12 182 4.5 5.5 5.0 2.0 425 chr2R 8967409 intron CG8216 - chr2R 8967622 intron CG8216 - chr2R 8967834 intron CG8216 - chr2R_12_8965001 chr2R_8965001 RAL-371_125b 780 chr2R 8976611 8976628 chr2R 8976692 8976757 5 112 3.5 3.0 3.2 1.2 146 chr2R 8976611 intron CG8213 - chr2R 8976684 intron CG8213 - chr2R 8976757 intron CG8213 - chr2R_5_8975001 chr2R_8975001 RAL-371_125b 781 chr2R 9025922 9025985 chr2R 9026341 9026404 9 416 3.5 1.5 2.5 2.6 482 chr2R 9025922 intron CG8170 - chr2R 9026163 intron CG8170 - chr2R 9026404 intron CG8170 - chr2R_9_9025001 chr2R_9025001 RAL-371_125b 782 chr2R 9047371 9047438 chr2R 9047516 9047583 17 145 2.5 5.5 4.0 3.4 212 chr2R 9047371 intron CG13743 - chr2R 9047477 intron CG13743 - chr2R 9047583 intron CG13743 - chr2R_17_9045001 chr2R_9045001 RAL-371_125b 783 chr2R 9065870 9065945 chr2R 9066002 9066077 10 132 2.5 5.0 3.8 2.1 207 chr2R 9065870 intron ana + chr2R 9065974 intron ana + chr2R 9066077 intron ana + chr2R_10_9065001 chr2R_9065001 RAL-371_125b 784 chr2R 9151264 9151323 chr2R 9157784 9157843 Burdock 7 6520 8.0 6.0 7.0 0.9 6579 chr2R 9151264 exon CG30345 + chr2R 9154554 intergenic not near genes chr2R 9157843 intergenic CG8008 - chr2R_7_9150001 chr2R_9150001 RAL-371_125b 785 chr2R 9161930 9161979 chr2R 9162065 9162114 10 135 4.0 2.5 3.2 2.4 184 chr2R 9161930 5` UTR CR44283 + chr2R 9162022 intergenic CG8046 -,CR44283 + chr2R 9162114 3` UTR CG8046 - chr2R_10_9160001 chr2R_9160001 RAL-371_125b 786 chr2R 9183090 9183145 chr2R 9183222 9183277 8 132 5.0 5.0 5.0 1.3 187 chr2R 9183090 intron ltd - chr2R 9183184 intron ltd - chr2R 9183277 intron ltd - chr2R_8_9180001 chr2R_9180001 RAL-371_125b 787 chr2R 9212688 9212710 chr2R 9213224 9213225 roo 6 532 4.5 6.0 5.2 1.0 537 chr2R 9212688 intergenic CR45309 + chr2R 9212956 intergenic CR45309 + chr2R 9213225 5` UTR CR45309 + chr2R_6_9210001 chr2R_9210001 RAL-371_125b 788 chr2R 9227830 9227892 chr2R 9227967 9228023 7 136 2.5 1.5 2.0 2.3 193 chr2R 9227830 3` UTR hig - chr2R 9227926 3` UTR hig - chr2R 9228023 3` UTR hig - chr2R_7_9225001 chr2R_9225001 RAL-371_125b 789 chr2R 9461193 9461221 chr2R 9461332 9461360 11 138 7.0 2.5 4.8 1.9 167 chr2R 9461193 intron Camta + chr2R 9461276 intron Camta + chr2R 9461360 intron Camta + chr2R_11_9460001 chr2R_9460001 RAL-371_125b 790 chr2R 9461222 9461252 chr2R 9461331 9461391 10 134 4.5 2.5 3.5 2.2 169 chr2R 9461222 intron Camta + chr2R 9461306 intron Camta + chr2R 9461391 intron Camta + chr2R_10_9460001 chr2R_9460001 RAL-371_125b 791 chr2R 9480038 9480064 chr2R 9490619 9490645 roo 5 10581 7.0 4.5 5.8 0.7 10607 chr2R 9480038 intergenic not near genes chr2R 9485342 intergenic not near genes chr2R 9490645 intergenic not near genes chr2R_5_9485001 chr2R_9485001 RAL-371_125b 792 chr2R 9531896 9531904 chr2R 9532007 9532030 4 122 0.5 3.5 2.0 1.3 134 chr2R 9531896 intron brp + chr2R 9531963 intron brp + chr2R 9532030 intron brp + chr2R_4_9530001 chr2R_9530001 RAL-371_125b 793 chr2R 9605780 9605853 chr2R 9605937 9606010 14 157 2.0 2.0 2.0 4.7 230 chr2R 9605780 3` UTR CR44285 - chr2R 9605895 intergenic CR44285 -,GstT1 +,CG1902 + chr2R 9606010 5` UTR GstT1 + chr2R_14_9605001 chr2R_9605001 RAL-371_125b 794 chr2R 9618522 9618534 chr2R 9618800 9618812 4 278 5.0 0.0 2.5 1.1 290 chr2R 9618522 intron Mmp2 - chr2R 9618667 intron Mmp2 - chr2R 9618812 intron Mmp2 - chr2R_4_9615001 chr2R_9615001 RAL-371_125b 795 chr2R 9699406 9699441 chr2R 9699503 9699547 6 125 4.0 2.5 3.2 1.4 141 chr2R 9699406 intergenic not near genes chr2R 9699476 intergenic not near genes chr2R 9699547 intergenic not near genes chr2R_6_9695001 chr2R_9695001 RAL-371_125b 796 chr2R 9726571 9726616 chr2R 9734172 9734217 17.6 7 7601 5.5 4.0 4.8 1.2 7646 chr2R 9726571 intron sqa - chr2R 9730394 intron sqa - chr2R 9734217 intron sqa - chr2R_7_9730001 chr2R_9730001 RAL-371_125b 797 chr2R 9789036 9789104 chr2R 9789184 9789244 10 143 1.5 1.5 1.5 4.0 208 chr2R 9789036 intron,5` UTR CG1688 -,CR44208 + chr2R 9789140 intron,5` UTR CG1688 -,CR44208 + chr2R 9789244 intron,5` UTR CG1688 -,CR44208 + chr2R_10_9785001 chr2R_9785001 RAL-371_125b 798 chr2R 9871021 9871058 chr2R 9871557 9871594 roo 4 534 5.5 7.5 6.5 0.5 573 chr2R 9871021 intron cbx - chr2R 9871308 intron cbx - chr2R 9871594 intron,5` UTR cbx -,CG18446 + chr2R_4_9870001 chr2R_9870001 RAL-371_125b 799 chr2R 9896770 9896841 chr2R 9896948 9897009 15 175 4.5 4.0 4.2 2.9 239 chr2R 9896770 exon CG30007 + chr2R 9896890 exon CG30007 + chr2R 9897009 exon CG30007 + chr2R_15_9895001 chr2R_9895001 RAL-371_125b 800 chr2R 9945421 9945464 chr2R 9945667 9945710 BS 8 244 2.0 8.0 5.0 1.3 289 chr2R 9945421 intron Mef2 - chr2R 9945566 intron Mef2 - chr2R 9945710 intron Mef2 - chr2R_8_9945001 chr2R_9945001 RAL-371_125b 801 chr2R 10005510 10005581 chr2R 10005657 10005728 8 146 1.5 3.0 2.2 2.5 218 chr2R 10005510 intron Pka-R2 - chr2R 10005619 intron Pka-R2 - chr2R 10005728 intron Pka-R2 - chr2R_8_10005001 chr2R_10005001 RAL-371_125b 802 chr2R 10005808 10005879 chr2R 10007023 10007060 1360 16 1210 5.0 4.0 4.5 2.9 1252 chr2R 10005808 intron Pka-R2 - chr2R 10006434 intron Pka-R2 - chr2R 10007060 intron Pka-R2 - chr2R_16_10005001 chr2R_10005001 RAL-371_125b 803 chr2R 10008579 10008596 chr2R 10008702 10008734 5 126 0.0 0.0 0.0 5.0 155 chr2R 10008579 intron Pka-R2 - chr2R 10008656 intron Pka-R2 - chr2R 10008734 intron Pka-R2 - chr2R_5_10005001 chr2R_10005001 RAL-371_125b 804 chr2R 10086886 10086924 chr2R 10087027 10087071 6 142 4.5 6.0 5.2 1.0 185 chr2R 10086886 intron,exon CG2269 +,sut4 - chr2R 10086978 intron,5` UTR CG2269 +,sut4 - chr2R 10087071 intron,5` UTR CG2269 +,sut4 - chr2R_6_10085001 chr2R_10085001 RAL-371_125b 805 chr2R 10132141 10132186 chr2R 10132271 10132316 10 130 6.0 4.0 5.0 1.7 175 chr2R 10132141 exon gem + chr2R 10132228 intron gem + chr2R 10132316 exon gem + chr2R_10_10130001 chr2R_10130001 RAL-371_125b 806 chr2R 10147605 10147668 chr2R 10147738 10147801 8 130 2.0 4.0 3.0 2.0 196 chr2R 10147605 intron KCNQ - chr2R 10147703 intron KCNQ - chr2R 10147801 intron KCNQ - chr2R_8_10145001 chr2R_10145001 RAL-371_125b 807 chr2R 10168315 10168356 chr2R 10168442 10168483 7 127 3.0 7.0 5.0 1.2 168 chr2R 10168315 intron KCNQ - chr2R 10168399 intron KCNQ - chr2R 10168483 intron KCNQ - chr2R_7_10165001 chr2R_10165001 RAL-371_125b 808 chr2R 10169497 10169561 chr2R 10169618 10169646 13 114 2.0 3.0 2.5 3.7 149 chr2R 10169497 intron KCNQ - chr2R 10169572 intron KCNQ - chr2R 10169646 intron KCNQ - chr2R_13_10165001 chr2R_10165001 RAL-371_125b 809 chr2R 10176837 10176904 chr2R 10186054 10186121 roo 8 9217 3.5 2.0 2.8 2.1 9284 chr2R 10176837 intron KCNQ - chr2R 10181479 intron KCNQ - chr2R 10186121 intron KCNQ - chr2R_8_10180001 chr2R_10180001 RAL-371_125b 810 chr2R 10196783 10196809 chr2R 10196924 10196947 roo 8 140 3.5 8.5 6.0 1.1 164 chr2R 10196783 intergenic CG34221 - chr2R 10196865 intergenic CG34221 - chr2R 10196947 intergenic CG34221 - chr2R_8_10195001 chr2R_10195001 RAL-371_125b 811 chr2R 10216144 10216204 chr2R 10216272 10216332 14 126 8.5 1.5 5.0 2.3 188 chr2R 10216144 intron,intron CG12912 -,Hr46 - chr2R 10216238 intron,intron CG12912 -,Hr46 - chr2R 10216332 intron,intron CG12912 -,Hr46 - chr2R_14_10215001 chr2R_10215001 RAL-371_125b 812 chr2R 10269541 10269583 chr2R 10269685 10269727 11 144 1.0 6.5 3.8 2.3 186 chr2R 10269541 intron CAP + chr2R 10269634 intron CAP + chr2R 10269727 intron CAP + chr2R_11_10265001 chr2R_10265001 RAL-371_125b 813 chr2R 10274783 10274794 chr2R 10274909 10274914 4 124 7.5 1.5 4.5 0.7 131 chr2R 10274783 intron CAP + chr2R 10274848 intron CAP + chr2R 10274914 intron CAP + chr2R_4_10270001 chr2R_10270001 RAL-371_125b 814 chr2R 10313268 10313336 chr2R 10313404 10313474 7 135 1.5 3.0 2.2 2.2 206 chr2R 10313268 intergenic not near genes chr2R 10313371 intergenic not near genes chr2R 10313474 intergenic Ndg + chr2R_7_10310001 chr2R_10310001 RAL-371_125b 815 chr2R 10352646 10352689 chr2R 10352773 10352816 12 127 5.0 6.0 5.5 1.8 170 chr2R 10352646 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352731 intron,3` UTR,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R 10352816 intron,exon,5` UTR,3` UTR CG42732 -,CG43171 -,CG43178 -,CG43201 - chr2R_12_10350001 chr2R_10350001 RAL-371_125b 816 chr2R 10387991 10388002 chr2R 10388100 10388126 4 130 0.0 5.0 2.5 1.1 135 chr2R 10387991 intron CG42732 - chr2R 10388058 intron CG42732 - chr2R 10388126 intron CG42732 - chr2R_4_10385001 chr2R_10385001 RAL-371_125b 817 chr2R 10411774 10411829 chr2R 10411885 10411961 12 129 2.5 4.0 3.2 2.9 187 chr2R 10411774 intron CG42732 - chr2R 10411868 intron CG42732 - chr2R 10411961 intron CG42732 - chr2R_12_10410001 chr2R_10410001 RAL-371_125b 818 chr2R 10454064 10454124 chr2R 10454179 10454241 14 125 6.0 6.0 6.0 2.0 177 chr2R 10454064 intron,intron Galphao +,Cyp49a1 - chr2R 10454152 intron,intron Galphao +,Cyp49a1 - chr2R 10454241 intron,intron Galphao +,Cyp49a1 - chr2R_14_10450001 chr2R_10450001 RAL-371_125b 819 chr2R 10563507 10563564 chr2R 10563637 10563693 11 129 2.0 5.0 3.5 2.4 186 chr2R 10563507 intron psq + chr2R 10563600 intron psq + chr2R 10563693 intron psq + chr2R_11_10560001 chr2R_10560001 RAL-371_125b 820 chr2R 10571567 10571652 chr2R 10571699 10571779 6 131 0.0 0.0 0.0 6.0 212 chr2R 10571567 intron psq + chr2R 10571673 intron psq + chr2R 10571779 intron psq + chr2R_6_10570001 chr2R_10570001 RAL-371_125b 821 chr2R 10574592 10574635 chr2R 10574724 10574767 4 132 8.0 6.5 7.2 0.5 175 chr2R 10574592 intron psq + chr2R 10574680 intron psq + chr2R 10574767 intron psq + chr2R_4_10570001 chr2R_10570001 RAL-371_125b 822 chr2R 10582065 10582107 chr2R 10582210 10582252 9 144 5.0 0.0 2.5 2.6 187 chr2R 10582065 intron psq + chr2R 10582158 intron psq + chr2R 10582252 intron psq + chr2R_9_10580001 chr2R_10580001 RAL-371_125b 823 chr2R 10585511 10585587 chr2R 10594144 10594185 Tirant 4 8610 3.0 0.0 1.5 1.6 8674 chr2R 10585511 intron psq + chr2R 10589848 intron psq + chr2R 10594185 intron psq + chr2R_4_10585001 chr2R_10585001 RAL-371_125b 824 chr2R 10622314 10622330 chr2R 10637128 10637144 mdg1 5 14812 5.0 0.0 2.5 1.4 14830 chr2R 10622314 intron CG11883 + chr2R 10629729 intron CG11883 + chr2R 10637144 intron CG11883 + chr2R_5_10625001 chr2R_10625001 RAL-371_125b 825 chr2R 10644014 10644061 chr2R 10644142 10644189 8 128 5.0 0.0 2.5 2.3 175 chr2R 10644014 intron Git - chr2R 10644102 intron Git - chr2R 10644189 intron Git - chr2R_8_10640001 chr2R_10640001 RAL-371_125b 826 chr2R 10658015 10658078 chr2R 10658157 10658220 11 142 4.0 3.5 3.8 2.3 205 chr2R 10658015 intergenic CR44452 - chr2R 10658118 intergenic not near genes chr2R 10658220 intergenic not near genes chr2R_11_10655001 chr2R_10655001 RAL-371_125b 827 chr2R 10761517 10761584 chr2R 10761721 10761788 12 203 4.0 3.5 3.8 2.5 271 chr2R 10761517 intron,5` UTR CG33144 -,CR43605 + chr2R 10761652 intron,5` UTR CG33144 -,CR43605 + chr2R 10761788 intron CG33144 - chr2R_12_10760001 chr2R_10760001 RAL-371_125b 828 chr2R 10770951 10771015 chr2R 10771082 10771146 11 131 1.5 3.0 2.2 3.4 195 chr2R 10770951 intron CG33144 - chr2R 10771048 intron CG33144 - chr2R 10771146 intron CG33144 - chr2R_11_10770001 chr2R_10770001 RAL-371_125b 829 chr2R 10800072 10800130 chr2R 10800204 10800262 12 132 6.5 3.0 4.8 2.1 190 chr2R 10800072 intergenic wde - chr2R 10800167 intergenic wde - chr2R 10800262 intergenic wde - chr2R_12_10800001 chr2R_10800001 RAL-371_125b 830 chr2R 10834046 10834107 chr2R 10834188 10834219 8 137 5.5 2.5 4.0 1.6 173 chr2R 10834046 intron CG12344 - chr2R 10834132 intron CG12344 - chr2R 10834219 intron CG12344 - chr2R_8_10830001 chr2R_10830001 RAL-371_125b 831 chr2R 10848274 10848284 chr2R 10848427 10848437 7 153 8.0 6.0 7.0 0.9 163 chr2R 10848274 intron CG30015 - chr2R 10848356 intron CG30015 - chr2R 10848437 intron CG30015 - chr2R_7_10845001 chr2R_10845001 RAL-371_125b 832 chr2R 11009786 11009824 chr2R 11019010 11019041 roo 4 9222 2.5 5.0 3.8 0.8 9255 chr2R 11009786 intron luna - chr2R 11014414 intron luna - chr2R 11019041 intron luna - chr2R_4_11010001 chr2R_11010001 RAL-371_125b 833 chr2R 11009834 11009847 chr2R 11019002 11019036 roo 4 9194 2.5 5.0 3.8 0.8 9202 chr2R 11009834 intron luna - chr2R 11014435 intron luna - chr2R 11019036 intron luna - chr2R_4_11010001 chr2R_11010001 RAL-371_125b 834 chr2R 11019842 11019881 chr2R 11024958 11024997 jockey 7 5115 4.5 2.5 3.5 1.6 5155 chr2R 11019842 intron luna - chr2R 11022420 intron luna - chr2R 11024997 intron luna - chr2R_7_11020001 chr2R_11020001 RAL-371_125b 835 chr2R 11044099 11044153 chr2R 11044233 11044269 4 130 1.0 5.0 3.0 1.0 170 chr2R 11044099 intron luna - chr2R 11044184 intron luna - chr2R 11044269 intron luna - chr2R_4_11040001 chr2R_11040001 RAL-371_125b 836 chr2R 11050576 11050639 chr2R 11054331 11054394 10 3758 32.0 20.0 26.0 0.4 3818 chr2R 11050576 intron luna - chr2R 11052485 intron luna - chr2R 11054394 intron luna - chr2R_10_11050001 chr2R_11050001 RAL-371_125b 837 chr2R 11102822 11102898 chr2R 11102954 11103030 12 132 2.5 0.0 1.2 5.5 208 chr2R 11102822 intron luna - chr2R 11102926 intron luna - chr2R 11103030 intron luna - chr2R_12_11100001 chr2R_11100001 RAL-371_125b 838 chr2R 11147027 11147095 chr2R 11147165 11147233 9 138 0.5 3.0 1.8 3.2 206 chr2R 11147027 intron,3` UTR CG13229 -,CG13231 + chr2R 11147130 intron CG13229 - chr2R 11147233 intron CG13229 - chr2R_9_11145001 chr2R_11145001 RAL-371_125b 839 chr2R 11154152 11154233 chr2R 11154321 11154403 8 168 2.5 1.5 2.0 2.7 251 chr2R 11154152 intron CG13229 - chr2R 11154278 intron CG13229 - chr2R 11154403 intron CG13229 - chr2R_8_11150001 chr2R_11150001 RAL-371_125b 840 chr2R 11161613 11161655 chr2R 11161803 11161818 10 184 3.0 3.0 3.0 2.5 205 chr2R 11161613 intron,intron CG13229 -,shn + chr2R 11161716 intron,intron CG13229 -,shn + chr2R 11161818 intron,intron CG13229 -,shn + chr2R_10_11160001 chr2R_11160001 RAL-371_125b 841 chr2R 11176115 11176157 chr2R 11176387 11176435 10 277 1.5 7.0 4.2 1.9 320 chr2R 11176115 intron shn + chr2R 11176275 intron shn + chr2R 11176435 intron shn + chr2R_10_11175001 chr2R_11175001 RAL-371_125b 842 chr2R 11179232 11179280 chr2R 11179368 11179416 11 136 2.0 4.0 3.0 2.8 184 chr2R 11179232 intron shn + chr2R 11179324 intron shn + chr2R 11179416 intron shn + chr2R_11_11175001 chr2R_11175001 RAL-371_125b 843 chr2R 11207783 11207809 chr2R 11208025 11208051 BS 4 242 7.5 5.0 6.2 0.6 268 chr2R 11207783 intron shn + chr2R 11207917 intron shn + chr2R 11208051 intron shn + chr2R_4_11205001 chr2R_11205001 RAL-371_125b 844 chr2R 11207813 11207835 chr2R 11208020 11208077 BS 7 235 6.5 4.5 5.5 1.1 264 chr2R 11207813 intron shn + chr2R 11207945 intron shn + chr2R 11208077 intron shn + chr2R_7_11205001 chr2R_11205001 RAL-371_125b 845 chr2R 11250047 11250088 chr2R 11250255 11250296 9 208 8.5 3.0 5.8 1.3 249 chr2R 11250047 intergenic CG43112 +,Or47a + chr2R 11250172 intergenic Or47a +,CG43112 + chr2R 11250296 intergenic Or47a +,CG43112 + chr2R_9_11250001 chr2R_11250001 RAL-371_125b 846 chr2R 11292930 11293001 chr2R 11293059 11293148 14 137 2.0 0.0 1.0 7.0 218 chr2R 11292930 exon,3` UTR dare -,CG30033 + chr2R 11293039 5` UTR,3` UTR dare -,CG30033 + chr2R 11293148 5` UTR,3` UTR dare -,CG30033 + chr2R_14_11290001 chr2R_11290001 RAL-371_125b 847 chr2R 11297590 11297627 chr2R 11301964 11302001 flea 6 4374 2.0 0.0 1.0 3.0 4411 chr2R 11297590 intergenic CG42336 - chr2R 11299796 intergenic not near genes chr2R 11302001 5` UTR CG7741 + chr2R_6_11295001 chr2R_11295001 RAL-371_125b 848 chr2R 11344106 11344159 chr2R 11344252 11344305 5 146 1.5 3.0 2.2 1.6 199 chr2R 11344106 intergenic alphaTry - chr2R 11344206 intergenic alphaTry - chr2R 11344305 3` UTR alphaTry - chr2R_5_11340001 chr2R_11340001 RAL-371_125b 849 chr2R 11367990 11368056 chr2R 11368116 11368129 10 120 2.5 1.0 1.8 3.6 139 chr2R 11367990 intron CG13204 + chr2R 11368060 intron CG13204 + chr2R 11368129 intron CG13204 + chr2R_10_11365001 chr2R_11365001 RAL-371_125b 850 chr2R 11380302 11380348 chr2R 11380543 11380589 8 240 2.0 3.0 2.5 2.3 287 chr2R 11380302 intergenic Sod3 - chr2R 11380446 3` UTR Sod3 - chr2R 11380589 3` UTR Sod3 - chr2R_8_11380001 chr2R_11380001 RAL-371_125b 851 chr2R 11415477 11415549 chr2R 11418675 11418723 opus 11 3194 2.0 5.5 3.8 2.3 3246 chr2R 11415477 intron Drip - chr2R 11417100 intron Drip - chr2R 11418723 intron Drip - chr2R_11_11415001 chr2R_11415001 RAL-371_125b 852 chr2R 11472610 11472674 chr2R 11473857 11473921 pogo 10 1243 2.5 7.0 4.8 1.7 1311 chr2R 11472610 intergenic not near genes chr2R 11473266 intergenic not near genes chr2R 11473921 intergenic not near genes chr2R_10_11470001 chr2R_11470001 RAL-371_125b 853 chr2R 11555350 11555413 chr2R 11555735 11555798 11 385 4.0 5.0 4.5 2.0 448 chr2R 11555350 intergenic not near genes chr2R 11555574 intergenic not near genes chr2R 11555798 intergenic not near genes chr2R_11_11555001 chr2R_11555001 RAL-371_125b 854 chr2R 11614580 11614793 chr2R 11614718 11614931 18 137 2.5 2.5 2.5 5.1 351 chr2R 11614580 intron tou - chr2R 11614756 intron tou - chr2R 11614931 intron tou - chr2R_18_11610001 chr2R_11610001 RAL-371_125b 855 chr2R 11724111 11724181 chr2R 11724244 11724314 6 132 1.5 2.0 1.8 2.1 203 chr2R 11724111 intron pyr + chr2R 11724212 intron pyr + chr2R 11724314 exon pyr + chr2R_6_11720001 chr2R_11720001 RAL-371_125b 856 chr2R 11863811 11863887 chr2R 11863948 11864024 15 137 5.0 3.0 4.0 3.0 213 chr2R 11863811 intergenic CG42531 + chr2R 11863918 intergenic CG42531 + chr2R 11864024 intergenic CG42531 + chr2R_15_11860001 chr2R_11860001 RAL-371_125b 857 chr2R 11928642 11928672 chr2R 11928770 11928800 5 128 0.0 3.0 1.5 2.0 158 chr2R 11928642 intergenic not near genes chr2R 11928721 intergenic not near genes chr2R 11928800 intergenic CR44312 - chr2R_5_11925001 chr2R_11925001 RAL-371_125b 858 chr2R 11931746 11931785 chr2R 11931873 11931912 7 125 6.5 2.5 4.5 1.3 166 chr2R 11931746 intergenic not near genes chr2R 11931829 intergenic not near genes chr2R 11931912 intergenic not near genes chr2R_7_11930001 chr2R_11930001 RAL-371_125b 859 chr2R 11934037 11934092 chr2R 11934169 11934224 6 132 5.0 3.5 4.2 1.2 187 chr2R 11934037 intergenic not near genes chr2R 11934130 intergenic not near genes chr2R 11934224 intergenic not near genes chr2R_6_11930001 chr2R_11930001 RAL-371_125b 860 chr2R 11952618 11952670 chr2R 11952745 11952797 4 127 2.0 4.5 3.2 1.0 179 chr2R 11952618 intron CG13188 + chr2R 11952708 intron CG13188 + chr2R 11952797 intron CG13188 + chr2R_4_11950001 chr2R_11950001 RAL-371_125b 861 chr2R 12087199 12087271 chr2R 12087331 12087403 5 132 2.0 2.0 2.0 1.7 204 chr2R 12087199 3` UTR jeb - chr2R 12087301 3` UTR jeb - chr2R 12087403 3` UTR jeb - chr2R_5_12085001 chr2R_12085001 RAL-371_125b 862 chr2R 12104641 12104694 chr2R 12104768 12104821 9 127 3.5 4.5 4.0 1.8 180 chr2R 12104641 intron jeb - chr2R 12104731 intron jeb - chr2R 12104821 intron jeb - chr2R_9_12100001 chr2R_12100001 RAL-371_125b 863 chr2R 12120367 12120394 chr2R 12120496 12120526 4 129 8.5 2.0 5.2 0.6 159 chr2R 12120367 intergenic not near genes chr2R 12120446 intergenic not near genes chr2R 12120526 intergenic not near genes chr2R_4_12120001 chr2R_12120001 RAL-371_125b 864 chr2R 12120404 12120427 chr2R 12120491 12120542 6 110 5.5 2.0 3.8 1.2 138 chr2R 12120404 intergenic not near genes chr2R 12120473 intergenic not near genes chr2R 12120542 intergenic not near genes chr2R_6_12120001 chr2R_12120001 RAL-371_125b 865 chr2R 12124784 12124820 chr2R 12124918 12124934 5 130 7.0 4.0 5.5 0.8 150 chr2R 12124784 intergenic not near genes chr2R 12124859 intergenic not near genes chr2R 12124934 intergenic not near genes chr2R_5_12120001 chr2R_12120001 RAL-371_125b 866 chr2R 12185960 12186028 chr2R 12186105 12186173 18 143 3.5 8.5 6.0 2.6 213 chr2R 12185960 intron Cyp6g1 + chr2R 12186066 intron Cyp6g1 + chr2R 12186173 intron Cyp6g1 + chr2R_18_12185001 chr2R_12185001 RAL-371_125b 867 chr2R 12185224 12185262 chr2R 12188111 12188137 6 2877 13.0 100.0 56.5 0.1 2913 chr2R 12185224 3` UTR,exon CG13175 +,CG33964 + chr2R 12186680 exon Cyp6g1 + chr2R 12188137 3` UTR Cyp6g1 + chr2R_6_12185001 chr2R_12185001 RAL-371_125b 868 chr2R 12189353 12189397 chr2R 12189596 12189624 6 240 94.0 82.0 88.0 0.1 271 chr2R 12189353 exon Cyp6g2 - chr2R 12189488 exon Cyp6g2 - chr2R 12189624 exon Cyp6g2 - chr2R_6_12185001 chr2R_12185001 RAL-371_125b 869 chr2R 12187480 12187489 chr2R 12190046 12190058 8 2568 66.5 86.5 76.5 0.1 2578 chr2R 12187480 exon Cyp6g1 + chr2R 12188769 exon Cyp6g2 - chr2R 12190058 exon Cyp6g2 - chr2R_8_12185001 chr2R_12185001 RAL-371_125b 870 chr2R 12187476 12187534 chr2R 12190060 12190100 26 2578 90.0 77.5 83.8 0.3 2624 chr2R 12187476 exon Cyp6g1 + chr2R 12188788 exon Cyp6g2 - chr2R 12190100 exon Cyp6g2 - chr2R_26_12185001 chr2R_12185001 RAL-371_125b 871 chr2R 12187472 12187510 chr2R 12190103 12190122 19 2590 80.5 60.0 70.2 0.3 2650 chr2R 12187472 exon Cyp6g1 + chr2R 12188797 exon Cyp6g2 - chr2R 12190122 exon Cyp6g2 - chr2R_19_12185001 chr2R_12185001 RAL-371_125b 872 chr2R 12207985 12208026 chr2R 12208087 12208160 5 120 3.0 3.5 3.2 1.2 175 chr2R 12207985 intergenic not near genes chr2R 12208072 intergenic not near genes chr2R 12208160 intergenic not near genes chr2R_5_12205001 chr2R_12205001 RAL-371_125b 873 chr2R 12217537 12217591 chr2R 12217658 12217721 14 128 4.0 4.0 4.0 2.8 184 chr2R 12217537 intergenic not near genes chr2R 12217629 intergenic not near genes chr2R 12217721 intergenic not near genes chr2R_14_12215001 chr2R_12215001 RAL-371_125b 874 chr2R 12284266 12284325 chr2R 12284400 12284459 4 134 0.0 3.5 1.8 1.4 193 chr2R 12284266 intron CG42700 + chr2R 12284362 intron CG42700 + chr2R 12284459 intron CG42700 + chr2R_4_12280001 chr2R_12280001 RAL-371_125b 875 chr2R 12355971 12356047 chr2R 12356280 12356348 15 305 3.5 3.5 3.5 3.3 377 chr2R 12355971 exon CG30049 + chr2R 12356160 exon CG30049 + chr2R 12356348 intron CG30049 + chr2R_15_12355001 chr2R_12355001 RAL-371_125b 876 chr2R 12363339 12363376 chr2R 12363821 12363847 13 480 10.5 3.5 7.0 1.6 508 chr2R 12363339 intergenic CG30043 + chr2R 12363593 intergenic CG30043 + chr2R 12363847 intergenic not near genes chr2R_13_12360001 chr2R_12360001 RAL-371_125b 877 chr2R 12370962 12370998 chr2R 12371195 12371231 7 233 2.5 4.5 3.5 1.6 269 chr2R 12370962 intergenic CG33012 + chr2R 12371096 intergenic CG33012 +,CG13160 + chr2R 12371231 intergenic CG33012 +,CG13160 + chr2R_7_12370001 chr2R_12370001 RAL-371_125b 878 chr2R 12501654 12501687 chr2R 12503866 12503899 Rt1c 6 2209 11.0 5.0 8.0 0.7 2245 chr2R 12501654 intron fdl - chr2R 12502776 intron fdl - chr2R 12503899 intron fdl - chr2R_6_12500001 chr2R_12500001 RAL-371_125b 879 chr2R 12535806 12535857 chr2R 12535922 12535982 11 123 5.0 6.5 5.8 1.6 176 chr2R 12535806 intron fra + chr2R 12535894 intron fra + chr2R 12535982 intron fra + chr2R_11_12535001 chr2R_12535001 RAL-371_125b 880 chr2R 12565518 12565594 chr2R 12565948 12565993 10 401 0.0 3.5 1.8 3.6 475 chr2R 12565518 intergenic not near genes chr2R 12565756 intergenic Cyp301a1 + chr2R 12565993 intergenic Cyp301a1 + chr2R_10_12565001 chr2R_12565001 RAL-371_125b 881 chr2R 12702278 12702346 chr2R 12702409 12702477 15 129 3.0 0.5 1.8 5.4 199 chr2R 12702278 intergenic not near genes chr2R 12702378 intergenic not near genes chr2R 12702477 intergenic not near genes chr2R_15_12700001 chr2R_12700001 RAL-371_125b 882 chr2R 12707486 12707537 chr2R 12715902 12715953 roo 4 8415 2.5 1.0 1.8 1.4 8467 chr2R 12707486 intron CG42663 + chr2R 12711720 intron CG42663 + chr2R 12715953 intron CG42663 + chr2R_4_12710001 chr2R_12710001 RAL-371_125b 883 chr2R 12777761 12777774 chr2R 12777916 12777929 4 155 4.0 4.0 4.0 0.8 168 chr2R 12777761 5` UTR CR45266 + chr2R 12777845 5` UTR CR45266 + chr2R 12777929 5` UTR CR45266 + chr2R_4_12775001 chr2R_12775001 RAL-371_125b 884 chr2R 12789266 12789300 chr2R 12797681 12797707 roo 7 8411 2.0 5.5 3.8 1.5 8441 chr2R 12789266 intron,3` UTR sca +,CR45137 - chr2R 12793486 intron,intron sca +,CR45137 - chr2R 12797707 intron,3` UTR sca +,CR45137 - chr2R_7_12790001 chr2R_12790001 RAL-371_125b 885 chr2R 12789317 12789322 chr2R 12797675 12797733 roo 4 8390 1.5 5.5 3.5 0.9 8416 chr2R 12789317 intron,3` UTR sca +,CR45137 - chr2R 12793525 intron,intron sca +,CR45137 - chr2R 12797733 intron,3` UTR sca +,CR45137 - chr2R_4_12790001 chr2R_12790001 RAL-371_125b 886 chr2R 12808269 12808345 chr2R 12808414 12808490 19 144 4.0 2.5 3.2 4.5 221 chr2R 12808269 intergenic CG17580 + chr2R 12808380 intergenic not near genes chr2R 12808490 intergenic not near genes chr2R_19_12805001 chr2R_12805001 RAL-371_125b 887 chr2R 12817193 12817223 chr2R 12817375 12817416 8 191 1.5 2.0 1.8 2.9 223 chr2R 12817193 intergenic not near genes chr2R 12817304 intergenic not near genes chr2R 12817416 intergenic not near genes chr2R_8_12815001 chr2R_12815001 RAL-371_125b 888 chr2R 12819416 12819471 chr2R 12824539 12824562 jockey 8 5119 2.0 5.0 3.5 1.8 5146 chr2R 12819416 intergenic not near genes chr2R 12821989 intergenic not near genes chr2R 12824562 intergenic not near genes chr2R_8_12820001 chr2R_12820001 RAL-371_125b 889 chr2R 13020396 13020474 chr2R 13020542 13020620 9 138 1.0 3.0 2.0 3.0 224 chr2R 13020396 intergenic not near genes chr2R 13020508 intergenic not near genes chr2R 13020620 intergenic not near genes chr2R_9_13020001 chr2R_13020001 RAL-371_125b 890 chr2R 13024810 13024815 chr2R 13024965 13024975 4 159 3.0 13.0 8.0 0.4 165 chr2R 13024810 intergenic not near genes chr2R 13024892 intergenic not near genes chr2R 13024975 intergenic not near genes chr2R_4_13020001 chr2R_13020001 RAL-371_125b 891 chr2R 13136819 13136855 chr2R 13141667 13141699 Doc 11 4846 4.0 7.0 5.5 1.7 4880 chr2R 13136819 exon Cap-G + chr2R 13139259 intron Cap-G + chr2R 13141699 intron Cap-G + chr2R_11_13135001 chr2R_13135001 RAL-371_125b 892 chr2R 13167391 13167459 chr2R 13167535 13167609 10 145 2.5 0.0 1.2 4.5 218 chr2R 13167391 intron GLaz - chr2R 13167500 intron GLaz - chr2R 13167609 intron GLaz - chr2R_10_13165001 chr2R_13165001 RAL-371_125b 893 chr2R 13194805 13194839 chr2R 13194947 13194969 9 135 8.5 4.5 6.5 1.2 164 chr2R 13194805 intergenic not near genes chr2R 13194887 intergenic not near genes chr2R 13194969 intergenic not near genes chr2R_9_13190001 chr2R_13190001 RAL-371_125b 894 chr2R 13266749 13266821 chr2R 13266875 13266948 10 112 7.0 8.0 7.5 1.2 199 chr2R 13266749 intergenic CG42319 + chr2R 13266848 intergenic not near genes chr2R 13266948 intergenic not near genes chr2R_10_13265001 chr2R_13265001 RAL-371_125b 895 chr2R 13302528 13302591 chr2R 13302656 13302719 15 128 3.0 6.0 4.5 2.7 191 chr2R 13302528 intergenic not near genes chr2R 13302624 intergenic not near genes chr2R 13302719 intergenic not near genes chr2R_15_13300001 chr2R_13300001 RAL-371_125b 896 chr2R 13368745 13368765 chr2R 13368906 13368926 5 161 6.5 3.0 4.8 0.9 181 chr2R 13368745 intergenic not near genes chr2R 13368836 intergenic not near genes chr2R 13368926 intergenic not near genes chr2R_5_13365001 chr2R_13365001 RAL-371_125b 897 chr2R 13372151 13372188 chr2R 13372273 13372279 4 118 5.5 7.5 6.5 0.5 128 chr2R 13372151 intergenic not near genes chr2R 13372215 intergenic not near genes chr2R 13372279 intergenic not near genes chr2R_4_13370001 chr2R_13370001 RAL-371_125b 898 chr2R 13439091 13439140 chr2R 13439279 13439328 4 188 4.0 4.0 4.0 0.8 237 chr2R 13439091 intergenic CG42321 -,cnn - chr2R 13439210 intergenic cnn -,CG42321 - chr2R 13439328 3` UTR cnn - chr2R_4_13435001 chr2R_13435001 RAL-371_125b 899 chr2R 13547063 13547086 chr2R 13547308 13547331 6 245 3.5 6.5 5.0 1.0 268 chr2R 13547063 intron CG6145 - chr2R 13547197 intron CG6145 - chr2R 13547331 intron CG6145 - chr2R_6_13545001 chr2R_13545001 RAL-371_125b 900 chr2R 13568449 13568482 chr2R 13568871 13568909 7 426 3.0 4.0 3.5 1.6 460 chr2R 13568449 intergenic not near genes chr2R 13568679 intergenic not near genes chr2R 13568909 intergenic not near genes chr2R_7_13565001 chr2R_13565001 RAL-371_125b 901 chr2R 13574357 13574428 chr2R 13574482 13574559 13 126 2.0 1.0 1.5 5.2 202 chr2R 13574357 intergenic CG42808 - chr2R 13574458 intergenic CG42808 -,CR44365 + chr2R 13574559 intergenic CG42808 -,CR44365 + chr2R_13_13570001 chr2R_13570001 RAL-371_125b 902 chr2R 13580466 13580518 chr2R 13580866 13580918 jockey 11 399 7.0 5.0 6.0 1.6 452 chr2R 13580466 3` UTR CG6191 - chr2R 13580692 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580918 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_11_13580001 chr2R_13580001 RAL-371_125b 903 chr2R 13629361 13629416 chr2R 13629495 13629550 13 132 5.0 3.5 4.2 2.5 189 chr2R 13629361 intron fas + chr2R 13629456 intron fas + chr2R 13629550 intron fas + chr2R_13_13625001 chr2R_13625001 RAL-371_125b 904 chr2R 13632275 13632305 chr2R 13632413 13632418 5 132 8.5 7.0 7.8 0.6 143 chr2R 13632275 intron fas + chr2R 13632346 intron fas + chr2R 13632418 intron fas + chr2R_5_13630001 chr2R_13630001 RAL-371_125b 905 chr2R 13670273 13670332 chr2R 13670497 13670561 15 228 6.0 2.5 4.2 2.9 288 chr2R 13670273 intron,exon fas +,CG18368 + chr2R 13670417 intron,exon fas +,CG18368 + chr2R 13670561 intron,exon fas +,CG18368 + chr2R_15_13670001 chr2R_13670001 RAL-371_125b 906 chr2R 13680012 13680025 chr2R 13680139 13680151 4 126 7.0 10.5 8.8 0.4 139 chr2R 13680012 intron fas + chr2R 13680082 intron fas + chr2R 13680151 intron fas + chr2R_4_13680001 chr2R_13680001 RAL-371_125b 907 chr2R 13684220 13684272 chr2R 13684348 13684395 13 128 1.0 2.5 1.8 4.6 175 chr2R 13684220 intron fas + chr2R 13684308 intron fas + chr2R 13684395 intron fas + chr2R_13_13680001 chr2R_13680001 RAL-371_125b 908 chr2R 13709809 13709835 chr2R 13709950 13709976 5 141 2.0 6.0 4.0 1.0 167 chr2R 13709809 intron fas + chr2R 13709892 intron fas + chr2R 13709976 intron fas + chr2R_5_13705001 chr2R_13705001 RAL-371_125b 909 chr2R 13715475 13715537 chr2R 13715660 13715722 9 184 3.0 5.0 4.0 1.8 247 chr2R 13715475 intron fas + chr2R 13715598 intron fas + chr2R 13715722 intron fas + chr2R_9_13715001 chr2R_13715001 RAL-371_125b 910 chr2R 13721161 13721177 chr2R 13721292 13721310 5 132 8.5 2.5 5.5 0.8 149 chr2R 13721161 intron fas + chr2R 13721236 intron fas + chr2R 13721310 intron fas + chr2R_5_13720001 chr2R_13720001 RAL-371_125b 911 chr2R 13721178 13721209 chr2R 13721290 13721342 7 119 5.5 2.0 3.8 1.5 164 chr2R 13721178 intron fas + chr2R 13721260 intron fas + chr2R 13721342 intron fas + chr2R_7_13720001 chr2R_13720001 RAL-371_125b 912 chr2R 13726258 13726269 chr2R 13726440 13726450 5 181 1.0 3.5 2.2 1.6 192 chr2R 13726258 exon fas + chr2R 13726354 intron fas + chr2R 13726450 intron fas + chr2R_5_13725001 chr2R_13725001 RAL-371_125b 913 chr2R 13752788 13752830 chr2R 13752936 13752978 7 147 7.0 3.0 5.0 1.2 190 chr2R 13752788 intergenic not near genes chr2R 13752883 intergenic not near genes chr2R 13752978 intergenic not near genes chr2R_7_13750001 chr2R_13750001 RAL-371_125b 914 chr2R 13768955 13769001 chr2R 13769104 13769150 6 149 4.0 2.0 3.0 1.5 195 chr2R 13768955 intergenic not near genes chr2R 13769052 intergenic not near genes chr2R 13769150 intergenic not near genes chr2R_6_13765001 chr2R_13765001 RAL-371_125b 915 chr2R 13790276 13790297 chr2R 13790402 13790423 4 126 4.5 0.0 2.2 1.2 147 chr2R 13790276 intergenic not near genes chr2R 13790350 intergenic not near genes chr2R 13790423 intergenic not near genes chr2R_4_13790001 chr2R_13790001 RAL-371_125b 916 chr2R 13793098 13793145 chr2R 13793224 13793271 13 123 1.5 3.0 2.2 4.1 173 chr2R 13793098 intergenic not near genes chr2R 13793184 intergenic not near genes chr2R 13793271 intergenic not near genes chr2R_13_13790001 chr2R_13790001 RAL-371_125b 917 chr2R 13798886 13798945 chr2R 13799018 13799077 5 132 3.0 3.5 3.2 1.2 191 chr2R 13798886 intron Cpr50Cb + chr2R 13798982 intron Cpr50Cb + chr2R 13799077 intron Cpr50Cb + chr2R_5_13795001 chr2R_13795001 RAL-371_125b 918 chr2R 13817644 13817669 chr2R 13817776 13817801 5 132 5.0 3.0 4.0 1.0 157 chr2R 13817644 intron stj + chr2R 13817722 intron stj + chr2R 13817801 intron stj + chr2R_5_13815001 chr2R_13815001 RAL-371_125b 919 chr2R 13837222 13837252 chr2R 13837353 13837383 5 131 1.0 4.0 2.5 1.4 161 chr2R 13837222 intron CG6347 + chr2R 13837302 intron CG6347 + chr2R 13837383 intron CG6347 + chr2R_5_13835001 chr2R_13835001 RAL-371_125b 920 chr2R 13888739 13888781 chr2R 13888866 13888920 5 135 4.0 0.0 2.0 1.7 181 chr2R 13888739 intron shot - chr2R 13888830 intron shot - chr2R 13888920 intron shot - chr2R_5_13885001 chr2R_13885001 RAL-371_125b 921 chr2R 13905571 13905591 chr2R 13907595 13907623 Rt1a 7 2028 2.0 2.5 2.2 2.2 2052 chr2R 13905571 intron shot - chr2R 13906597 intron shot - chr2R 13907623 intron shot - chr2R_7_13905001 chr2R_13905001 RAL-371_125b 922 chr2R 13925802 13925858 chr2R 13926028 13926084 8 226 6.5 2.0 4.2 1.5 282 chr2R 13925802 intron shot - chr2R 13925943 intron shot - chr2R 13926084 intron shot - chr2R_8_13925001 chr2R_13925001 RAL-371_125b 923 chr2R 14003604 14003630 chr2R 14003751 14003777 5 147 4.0 2.0 3.0 1.2 173 chr2R 14003604 intron mam + chr2R 14003690 intron mam + chr2R 14003777 intron mam + chr2R_5_14000001 chr2R_14000001 RAL-371_125b 924 chr2R 14014919 14014988 chr2R 14015763 14015822 8 843 2.5 3.0 2.8 2.1 903 chr2R 14014919 intron mam + chr2R 14015370 intron mam + chr2R 14015822 intron mam + chr2R_8_14015001 chr2R_14015001 RAL-371_125b 925 chr2R 14110933 14110993 chr2R 14111227 14111287 11 294 4.0 2.0 3.0 2.8 354 chr2R 14110933 intron Prosap - chr2R 14111110 intron Prosap - chr2R 14111287 intron Prosap - chr2R_11_14110001 chr2R_14110001 RAL-371_125b 926 chr2R 14168327 14168372 chr2R 14168466 14168511 4 139 3.5 1.5 2.5 1.1 184 chr2R 14168327 intergenic CG18327 +,CG18324 + chr2R 14168419 intergenic CG18327 +,CG18324 +,CR44368 - chr2R 14168511 intergenic CG18324 +,CG18327 +,CR44368 - chr2R_4_14165001 chr2R_14165001 RAL-371_125b 927 chr2R 14277539 14277598 chr2R 14277671 14277730 13 131 5.0 6.0 5.5 2.0 191 chr2R 14277539 5` UTR Ih + chr2R 14277634 5` UTR Ih + chr2R 14277730 5` UTR Ih + chr2R_13_14275001 chr2R_14275001 RAL-371_125b 928 chr2R 14285032 14285049 chr2R 14285165 14285174 4 131 0.0 4.0 2.0 1.3 142 chr2R 14285032 intron Ih + chr2R 14285103 intron Ih + chr2R 14285174 intron Ih + chr2R_4_14285001 chr2R_14285001 RAL-371_125b 929 chr2R 14294802 14294857 chr2R 14294931 14294987 16 126 4.0 8.0 6.0 2.3 185 chr2R 14294802 intron Ih + chr2R 14294894 intron Ih + chr2R 14294987 intron Ih + chr2R_16_14290001 chr2R_14290001 RAL-371_125b 930 chr2R 14357513 14357577 chr2R 14357653 14357717 12 140 4.0 0.5 2.2 3.8 204 chr2R 14357513 intergenic CG8617 -,Arc1 - chr2R 14357615 intergenic Arc1 -,CG8617 - chr2R 14357717 intergenic Arc1 -,CG8617 - chr2R_12_14355001 chr2R_14355001 RAL-371_125b 931 chr2R 14393832 14393885 chr2R 14393967 14394020 11 133 2.5 4.5 3.5 2.4 188 chr2R 14393832 intergenic not near genes chr2R 14393926 intergenic not near genes chr2R 14394020 intergenic not near genes chr2R_11_14390001 chr2R_14390001 RAL-371_125b 932 chr2R 14400322 14400379 chr2R 14400470 14400517 9 145 2.5 3.5 3.0 2.2 195 chr2R 14400322 intergenic not near genes chr2R 14400420 intergenic not near genes chr2R 14400517 intergenic not near genes chr2R_9_14400001 chr2R_14400001 RAL-371_125b 933 chr2R 14408980 14409050 chr2R 14409122 14409192 13 142 2.0 4.0 3.0 3.2 212 chr2R 14408980 intergenic CR44369 +,CG17385 - chr2R 14409086 intergenic CR44369 +,CG17385 - chr2R 14409192 intergenic CG17385 -,CR44369 + chr2R_13_14405001 chr2R_14405001 RAL-371_125b 934 chr2R 14427186 14427252 chr2R 14427315 14427381 13 129 2.0 3.5 2.8 3.4 195 chr2R 14427186 intergenic phyl - chr2R 14427284 intergenic phyl - chr2R 14427381 3` UTR phyl - chr2R_13_14425001 chr2R_14425001 RAL-371_125b 935 chr2R 14432406 14432442 chr2R 14432544 14432580 6 138 2.0 0.0 1.0 3.0 174 chr2R 14432406 intergenic phyl - chr2R 14432493 intergenic phyl - chr2R 14432580 intergenic phyl - chr2R_6_14430001 chr2R_14430001 RAL-371_125b 936 chr2R 14438804 14438825 chr2R 14438933 14438959 4 132 9.0 4.5 6.8 0.5 155 chr2R 14438804 intron Oaz + chr2R 14438882 intron Oaz + chr2R 14438959 intron Oaz + chr2R_4_14435001 chr2R_14435001 RAL-371_125b 937 chr2R 14460658 14460722 chr2R 14460792 14460832 10 129 3.5 2.0 2.8 2.6 174 chr2R 14460658 intron Oaz + chr2R 14460745 intron Oaz + chr2R 14460832 intron Oaz + chr2R_10_14460001 chr2R_14460001 RAL-371_125b 938 chr2R 14467267 14467327 chr2R 14476465 14476528 roo 16 9204 2.0 4.5 3.2 3.8 9261 chr2R 14467267 intergenic not near genes chr2R 14471898 intergenic not near genes chr2R 14476528 5` UTR CR44462 + chr2R_16_14470001 chr2R_14470001 RAL-371_125b 939 chr2R 14488925 14488998 chr2R 14489465 14489538 14 538 1.0 2.5 1.8 5.0 613 chr2R 14488925 intron L + chr2R 14489232 intron L + chr2R 14489538 intron L + chr2R_14_14485001 chr2R_14485001 RAL-371_125b 940 chr2R 14497344 14497409 chr2R 14498560 14498625 1360 6 1216 2.0 2.5 2.2 1.9 1281 chr2R 14497344 intergenic Cpsf160 -,L + chr2R 14497984 intron Cpsf160 - chr2R 14498625 3` UTR Cpsf160 - chr2R_6_14495001 chr2R_14495001 RAL-371_125b 941 chr2R 14514439 14514499 chr2R 14514585 14514642 12 140 5.5 3.5 4.5 2.2 203 chr2R 14514439 intron,exon Cpr51A -,CG30197 + chr2R 14514540 intron,intron Cpr51A -,CG30197 + chr2R 14514642 intron,intron Cpr51A -,CG30197 + chr2R_12_14510001 chr2R_14510001 RAL-371_125b 942 chr2R 14530326 14530365 chr2R 14530465 14530498 8 136 3.5 3.5 3.5 1.8 172 chr2R 14530326 intron ttv + chr2R 14530412 intron ttv + chr2R 14530498 intron ttv + chr2R_8_14530001 chr2R_14530001 RAL-371_125b 943 chr2R 14530696 14530777 chr2R 14530828 14530909 18 124 2.5 1.5 2.0 6.0 213 chr2R 14530696 intron ttv + chr2R 14530802 intron ttv + chr2R 14530909 intron ttv + chr2R_18_14530001 chr2R_14530001 RAL-371_125b 944 chr2R 14565520 14565584 chr2R 14565647 14565711 13 127 6.5 4.5 5.5 2.0 191 chr2R 14565520 intron ttv + chr2R 14565616 intron ttv + chr2R 14565711 intron ttv + chr2R_13_14565001 chr2R_14565001 RAL-371_125b 945 chr2R 14566432 14566462 chr2R 14566539 14566599 7 130 3.5 4.0 3.8 1.5 167 chr2R 14566432 intron ttv + chr2R 14566516 intron ttv + chr2R 14566599 intron ttv + chr2R_7_14565001 chr2R_14565001 RAL-371_125b 946 chr2R 14712482 14712539 chr2R 14712631 14712688 10 146 3.0 2.5 2.8 2.6 206 chr2R 14712482 intron mspo - chr2R 14712585 intron mspo - chr2R 14712688 intron mspo - chr2R_10_14710001 chr2R_14710001 RAL-371_125b 947 chr2R 14722262 14722283 chr2R 14722416 14722416 4 149 7.0 4.5 5.8 0.6 154 chr2R 14722262 intergenic not near genes chr2R 14722339 intergenic not near genes chr2R 14722416 intergenic not near genes chr2R_4_14720001 chr2R_14720001 RAL-371_125b 948 chr2R 14797548 14797629 chr2R 14797700 14797774 5 146 0.0 2.5 1.2 2.3 226 chr2R 14797548 intron kn - chr2R 14797661 intron kn - chr2R 14797774 intron kn - chr2R_5_14795001 chr2R_14795001 RAL-371_125b 949 chr2R 14826351 14826371 chr2R 14826505 14826525 7 154 3.5 0.5 2.0 2.3 174 chr2R 14826351 intergenic not near genes chr2R 14826438 intergenic not near genes chr2R 14826525 intergenic not near genes chr2R_7_14825001 chr2R_14825001 RAL-371_125b 950 chr2R 14842340 14842379 chr2R 14842486 14842525 6 146 6.5 1.5 4.0 1.2 185 chr2R 14842340 intergenic NaPi-T - chr2R 14842432 intergenic NaPi-T - chr2R 14842525 intergenic NaPi-T - chr2R_6_14840001 chr2R_14840001 RAL-371_125b 951 chr2R 14854989 14855012 chr2R 14855132 14855155 5 143 9.5 0.0 4.8 0.9 166 chr2R 14854989 5` UTR Ciao1 - chr2R 14855072 intergenic Ciao1 -,HPS1 + chr2R 14855155 intergenic Ciao1 -,HPS1 + chr2R_5_14855001 chr2R_14855001 RAL-371_125b 952 chr2R 14889173 14889242 chr2R 14897831 14897892 Max-element 8 8653 6.0 0.0 3.0 2.0 8719 chr2R 14889173 intergenic Cyp6a8 - chr2R 14893532 intergenic not near genes chr2R 14897892 intergenic not near genes chr2R_8_14890001 chr2R_14890001 RAL-371_125b 953 chr2R 14906441 14906511 chr2R 14906601 14906653 9 156 3.0 4.0 3.5 2.0 212 chr2R 14906441 intron CG10249 - chr2R 14906547 intron CG10249 - chr2R 14906653 intron CG10249 - chr2R_9_14905001 chr2R_14905001 RAL-371_125b 954 chr2R 14911660 14911716 chr2R 14911833 14911889 16 173 6.0 4.0 5.0 2.7 229 chr2R 14911660 intron CG10249 - chr2R 14911774 intron CG10249 - chr2R 14911889 intron CG10249 - chr2R_16_14910001 chr2R_14910001 RAL-371_125b 955 chr2R 14917801 14917877 chr2R 14917936 14918012 16 134 2.0 4.0 3.0 4.0 211 chr2R 14917801 intron CG10249 - chr2R 14917906 intron CG10249 - chr2R 14918012 intron CG10249 - chr2R_16_14915001 chr2R_14915001 RAL-371_125b 956 chr2R 14919058 14919120 chr2R 14919189 14919259 4 138 1.5 0.0 0.8 2.2 201 chr2R 14919058 intron CG10249 - chr2R 14919158 intron CG10249 - chr2R 14919259 intron CG10249 - chr2R_4_14915001 chr2R_14915001 RAL-371_125b 957 chr2R 14922099 14922167 chr2R 14922225 14922293 9 125 3.0 2.0 2.5 2.6 194 chr2R 14922099 intron CG10249 - chr2R 14922196 intron CG10249 - chr2R 14922293 intron CG10249 - chr2R_9_14920001 chr2R_14920001 RAL-371_125b 958 chr2R 14985425 14985464 chr2R 14985551 14985574 11 124 0.0 5.0 2.5 3.1 149 chr2R 14985425 intron pcs + chr2R 14985500 intron pcs + chr2R 14985574 intron pcs + chr2R_11_14985001 chr2R_14985001 RAL-371_125b 959 chr2R 14998474 14998504 chr2R 14998664 14998684 6 188 2.0 5.5 3.8 1.2 210 chr2R 14998474 intergenic not near genes chr2R 14998579 intergenic not near genes chr2R 14998684 intergenic not near genes chr2R_6_14995001 chr2R_14995001 RAL-371_125b 960 chr2R 15004671 15004745 chr2R 15005056 15005123 jockey 9 380 2.5 2.0 2.2 2.8 452 chr2R 15004671 intergenic not near genes chr2R 15004897 intergenic not near genes chr2R 15005123 intergenic not near genes chr2R_9_15000001 chr2R_15000001 RAL-371_125b 961 chr2R 15015414 15015479 chr2R 15022888 15022953 mdg1 13 7474 3.0 4.0 3.5 2.9 7539 chr2R 15015414 intron hbs + chr2R 15019184 intron hbs + chr2R 15022953 intron hbs + chr2R_13_15015001 chr2R_15015001 RAL-371_125b 962 chr2R 15027444 15027518 chr2R 15027582 15027631 12 128 3.5 3.5 3.5 2.7 187 chr2R 15027444 intron hbs + chr2R 15027538 intron hbs + chr2R 15027631 intron hbs + chr2R_12_15025001 chr2R_15025001 RAL-371_125b 963 chr2R 15051041 15051080 chr2R 15051173 15051212 9 132 3.5 4.5 4.0 1.8 171 chr2R 15051041 intergenic not near genes chr2R 15051126 intergenic not near genes chr2R 15051212 intergenic not near genes chr2R_9_15050001 chr2R_15050001 RAL-371_125b 964 chr2R 15051084 15051108 chr2R 15051170 15051230 8 124 1.5 4.5 3.0 2.0 146 chr2R 15051084 intergenic not near genes chr2R 15051157 intergenic not near genes chr2R 15051230 intergenic not near genes chr2R_8_15050001 chr2R_15050001 RAL-371_125b 965 chr2R 15051476 15051490 chr2R 15051608 15051660 6 154 6.0 2.5 4.2 1.2 184 chr2R 15051476 intergenic not near genes chr2R 15051568 intergenic not near genes chr2R 15051660 intergenic not near genes chr2R_6_15050001 chr2R_15050001 RAL-371_125b 966 chr2R 15065617 15065631 chr2R 15065696 15065714 4 104 3.0 2.0 2.5 1.1 97 chr2R 15065617 intergenic not near genes chr2R 15065666 intergenic not near genes chr2R 15065714 intergenic not near genes chr2R_4_15065001 chr2R_15065001 RAL-371_125b 967 chr2R 15092358 15092419 chr2R 15092497 15092559 5 140 0.5 1.5 1.0 2.5 201 chr2R 15092358 5` UTR CR44457 + chr2R 15092458 intergenic CR44457 + chr2R 15092559 intergenic CR44457 + chr2R_5_15090001 chr2R_15090001 RAL-371_125b 968 chr2R 15119274 15119336 chr2R 15127805 15127867 Tirant 15 8519 3.5 3.5 3.5 3.3 8593 chr2R 15119274 intron chn + chr2R 15123570 intron chn + chr2R 15127867 intron chn + chr2R_15_15120001 chr2R_15120001 RAL-371_125b 969 chr2R 15133386 15133448 chr2R 15133553 15133615 13 165 3.5 2.0 2.8 3.4 229 chr2R 15133386 intron chn + chr2R 15133500 intron chn + chr2R 15133615 intron chn + chr2R_13_15130001 chr2R_15130001 RAL-371_125b 970 chr2R 15137945 15137990 chr2R 15138077 15138089 8 128 1.5 2.0 1.8 2.9 144 chr2R 15137945 intron chn + chr2R 15138017 intron chn + chr2R 15138089 intron chn + chr2R_8_15135001 chr2R_15135001 RAL-371_125b 971 chr2R 15259024 15259081 chr2R 15259158 15259215 9 134 3.0 4.5 3.8 1.9 191 chr2R 15259024 intron ItgalphaPS4 + chr2R 15259120 intron ItgalphaPS4 + chr2R 15259215 intron ItgalphaPS4 + chr2R_9_15255001 chr2R_15255001 RAL-371_125b 972 chr2R 15295675 15295742 chr2R 15295842 15295897 6 170 4.5 2.0 3.2 1.4 222 chr2R 15295675 intron Trpm - chr2R 15295786 intron Trpm - chr2R 15295897 intron Trpm - chr2R_6_15295001 chr2R_15295001 RAL-371_125b 973 chr2R 15296113 15296161 chr2R 15296246 15296294 11 132 3.0 3.5 3.2 2.6 181 chr2R 15296113 intron Trpm - chr2R 15296204 intron Trpm - chr2R 15296294 intron Trpm - chr2R_11_15295001 chr2R_15295001 RAL-371_125b 974 chr2R 15330170 15330226 chr2R 15330354 15330410 11 184 1.0 2.0 1.5 4.4 240 chr2R 15330170 intergenic CR44371 - chr2R 15330290 intergenic CR44371 - chr2R 15330410 3` UTR CR44371 - chr2R_11_15330001 chr2R_15330001 RAL-371_125b 975 chr2R 15375347 15375362 chr2R 15376192 15376218 4 857 0.0 9.5 4.8 0.7 871 chr2R 15375347 intergenic not near genes chr2R 15375782 intergenic not near genes chr2R 15376218 intergenic dup - chr2R_4_15375001 chr2R_15375001 RAL-371_125b 976 chr2R 15580673 15580707 chr2R 15580801 15580835 5 123 5.0 0.0 2.5 1.4 162 chr2R 15580673 intergenic not near genes chr2R 15580754 intergenic not near genes chr2R 15580835 intergenic not near genes chr2R_5_15580001 chr2R_15580001 RAL-371_125b 977 chr2R 15580708 15580736 chr2R 15580795 15580844 5 108 2.0 1.0 1.5 2.0 136 chr2R 15580708 intergenic not near genes chr2R 15580776 intergenic not near genes chr2R 15580844 intergenic not near genes chr2R_5_15580001 chr2R_15580001 RAL-371_125b 978 chr2R 15697853 15697880 chr2R 15697984 15698011 4 131 8.0 0.0 4.0 0.8 158 chr2R 15697853 exon CG33462 + chr2R 15697932 3` UTR CG33462 + chr2R 15698011 intergenic CG33462 + chr2R_4_15695001 chr2R_15695001 RAL-371_125b 979 chr2R 15700212 15700252 chr2R 15700377 15700417 6 165 1.0 6.0 3.5 1.3 205 chr2R 15700212 intron,5` UTR CG30080 -,CG42662 - chr2R 15700314 intron,5` UTR CG30080 -,CG42662 - chr2R 15700417 intron,5` UTR CG30080 -,CG42662 - chr2R_6_15700001 chr2R_15700001 RAL-371_125b 980 chr2R 15712655 15712711 chr2R 15712791 15712847 6 136 7.5 3.5 5.5 0.9 192 chr2R 15712655 intergenic CG30083 - chr2R 15712751 intergenic CG30083 - chr2R 15712847 intergenic CG30083 - chr2R_6_15710001 chr2R_15710001 RAL-371_125b 981 chr2R 15752844 15752895 chr2R 15752973 15753004 6 126 2.5 4.0 3.2 1.4 160 chr2R 15752844 intron CG30089 + chr2R 15752924 intron CG30089 + chr2R 15753004 intron CG30089 + chr2R_6_15750001 chr2R_15750001 RAL-371_125b 982 chr2R 15833488 15833524 chr2R 15833615 15833648 5 131 2.5 3.5 3.0 1.2 160 chr2R 15833488 intron,intron tun +,Poxn - chr2R 15833568 intron,intron tun +,Poxn - chr2R 15833648 intron,intron tun +,Poxn - chr2R_5_15830001 chr2R_15830001 RAL-371_125b 983 chr2R 15845100 15845181 chr2R 15845229 15845310 10 129 2.5 2.5 2.5 2.9 210 chr2R 15845100 intron,intron tun +,CG8249 - chr2R 15845205 intron,intron tun +,CG8249 - chr2R 15845310 intron,exon tun +,CG8249 - chr2R_10_15845001 chr2R_15845001 RAL-371_125b 984 chr2R 15891772 15891835 chr2R 15891898 15891961 7 126 3.5 2.0 2.8 1.8 189 chr2R 15891772 intron sli - chr2R 15891866 intron sli - chr2R 15891961 intron sli - chr2R_7_15890001 chr2R_15890001 RAL-371_125b 985 chr2R 15910995 15911063 chr2R 15911620 15911686 7 622 2.5 2.0 2.2 2.2 691 chr2R 15910995 intron sli - chr2R 15911340 intron sli - chr2R 15911686 intron sli - chr2R_7_15910001 chr2R_15910001 RAL-371_125b 986 chr2R 15987917 15987977 chr2R 15988039 15988106 4 127 2.0 2.5 2.2 1.2 189 chr2R 15987917 intron,5` UTR Strn-Mlck -,CR45021 + chr2R 15988012 intron,5` UTR Strn-Mlck -,CR45021 + chr2R 15988106 intron Strn-Mlck - chr2R_4_15985001 chr2R_15985001 RAL-371_125b 987 chr2R 16037189 16037224 chr2R 16037312 16037349 7 123 13.5 9.0 11.2 0.6 160 chr2R 16037189 intron SP2353 + chr2R 16037269 intron SP2353 + chr2R 16037349 intron SP2353 + chr2R_7_16035001 chr2R_16035001 RAL-371_125b 988 chr2R 16093562 16093588 chr2R 16093670 16093725 4 130 0.5 4.5 2.5 1.1 163 chr2R 16093562 intron Dg - chr2R 16093644 intron Dg - chr2R 16093725 intron Dg - chr2R_4_16090001 chr2R_16090001 RAL-371_125b 989 chr2R 16119847 16119918 chr2R 16120021 16120072 12 165 3.5 5.0 4.2 2.3 225 chr2R 16119847 5` UTR Jhe + chr2R 16119960 intron Jhe + chr2R 16120072 intron Jhe + chr2R_12_16115001 chr2R_16115001 RAL-371_125b 990 chr2R 16236169 16236242 chr2R 16236296 16236369 19 122 5.5 4.0 4.8 3.3 200 chr2R 16236169 intergenic not near genes chr2R 16236269 intergenic CG3687 + chr2R 16236369 intergenic CG3687 + chr2R_19_16235001 chr2R_16235001 RAL-371_125b 991 chr2R 16400602 16400646 chr2R 16400749 16400790 9 144 3.0 5.0 4.0 1.8 188 chr2R 16400602 intron Sema-2b + chr2R 16400696 intron Sema-2b + chr2R 16400790 intron Sema-2b + chr2R_9_16400001 chr2R_16400001 RAL-371_125b 992 chr2R 16503824 16503897 chr2R 16503964 16504037 15 139 3.0 4.0 3.5 3.3 213 chr2R 16503824 intron Sema-2a + chr2R 16503930 intron Sema-2a + chr2R 16504037 intron Sema-2a + chr2R_15_16500001 chr2R_16500001 RAL-371_125b 993 chr2R 16517995 16518073 chr2R 16518121 16518199 11 125 3.0 2.0 2.5 3.1 204 chr2R 16517995 intron Sema-2a + chr2R 16518097 intron Sema-2a + chr2R 16518199 intron Sema-2a + chr2R_11_16515001 chr2R_16515001 RAL-371_125b 994 chr2R 16530477 16530484 chr2R 16530700 16530707 4 223 3.5 3.5 3.5 0.9 230 chr2R 16530477 exon Sema-2a + chr2R 16530592 intron Sema-2a + chr2R 16530707 intron Sema-2a + chr2R_4_16530001 chr2R_16530001 RAL-371_125b 995 chr2R 16538054 16538087 chr2R 16538198 16538231 10 144 5.5 3.0 4.2 1.9 177 chr2R 16538054 intergenic not near genes chr2R 16538142 intergenic not near genes chr2R 16538231 intergenic not near genes chr2R_10_16535001 chr2R_16535001 RAL-371_125b 996 chr2R 16539591 16539669 chr2R 16544858 16544928 copia 7 5261 0.0 0.5 0.2 5.8 5337 chr2R 16539591 intergenic not near genes chr2R 16542260 intergenic not near genes chr2R 16544928 intergenic not near genes chr2R_7_16540001 chr2R_16540001 RAL-371_125b 997 chr2R 16571830 16571901 chr2R 16571975 16572046 12 144 2.5 3.5 3.0 3.0 216 chr2R 16571830 intergenic CG4927 + chr2R 16571938 intergenic CG4927 + chr2R 16572046 intergenic CG4927 + chr2R_12_16570001 chr2R_16570001 RAL-371_125b 998 chr2R 16605239 16605263 chr2R 16605372 16605396 7 132 4.5 3.0 3.8 1.5 157 chr2R 16605239 intergenic not near genes chr2R 16605318 intergenic not near genes chr2R 16605396 intergenic not near genes chr2R_7_16605001 chr2R_16605001 RAL-371_125b 999 chr2R 16623297 16623353 chr2R 16623435 16623458 14 139 3.0 7.5 5.2 2.3 161 chr2R 16623297 exon CG5065 + chr2R 16623378 3` UTR CG5065 + chr2R 16623458 3` UTR CG5065 + chr2R_14_16620001 chr2R_16620001 RAL-371_125b 1000 chr2R 16695972 16696027 chr2R 16696089 16696153 10 122 5.0 5.0 5.0 1.7 181 chr2R 16695972 intron CG30463 - chr2R 16696062 intron CG30463 - chr2R 16696153 intron CG30463 - chr2R_10_16695001 chr2R_16695001 RAL-371_125b 1001 chr2R 16732573 16732651 chr2R 16732710 16732773 11 131 1.0 4.0 2.5 3.1 200 chr2R 16732573 5` UTR CG30463 - chr2R 16732673 5` UTR CG30463 - chr2R 16732773 5` UTR CG30463 - chr2R_11_16730001 chr2R_16730001 RAL-371_125b 1002 chr2R 16737097 16737115 chr2R 16737247 16737265 6 147 6.0 4.5 5.2 1.0 168 chr2R 16737097 3` UTR CG43104 - chr2R 16737181 3` UTR CG43104 - chr2R 16737265 exon CG43104 - chr2R_6_16735001 chr2R_16735001 RAL-371_125b 1003 chr2R 16737119 16737155 chr2R 16737239 16737305 10 144 2.5 2.0 2.2 3.1 186 chr2R 16737119 3` UTR CG43104 - chr2R 16737212 3` UTR CG43104 - chr2R 16737305 exon CG43104 - chr2R_10_16735001 chr2R_16735001 RAL-371_125b 1004 chr2R 16807997 16808050 chr2R 16808151 16808204 14 154 1.5 3.0 2.2 4.4 207 chr2R 16807997 intergenic not near genes chr2R 16808100 intergenic not near genes chr2R 16808204 intergenic not near genes chr2R_14_16805001 chr2R_16805001 RAL-371_125b 1005 chr2R 16974465 16974532 chr2R 16974591 16974658 11 125 1.0 0.5 0.8 6.1 193 chr2R 16974465 intron Cbp53E + chr2R 16974562 intron Cbp53E + chr2R 16974658 intron Cbp53E + chr2R_11_16970001 chr2R_16970001 RAL-371_125b 1006 chr2R 16983583 16983627 chr2R 16983714 16983758 14 130 5.5 4.5 5.0 2.3 175 chr2R 16983583 intron Cbp53E + chr2R 16983670 intron Cbp53E + chr2R 16983758 intron Cbp53E + chr2R_14_16980001 chr2R_16980001 RAL-371_125b 1007 chr2R 17077954 17077978 chr2R 17078076 17078105 7 126 3.5 0.0 1.8 2.5 151 chr2R 17077954 intron CG30460 - chr2R 17078030 intron CG30460 - chr2R 17078105 intron CG30460 - chr2R_7_17075001 chr2R_17075001 RAL-371_125b 1008 chr2R 17147203 17147252 chr2R 17152284 17152333 jockey 11 5081 4.5 6.0 5.2 1.8 5130 chr2R 17147203 intergenic not near genes chr2R 17149768 intergenic not near genes chr2R 17152333 intergenic not near genes chr2R_11_17145001 chr2R_17145001 RAL-371_125b 1009 chr2R 17161305 17161365 chr2R 17161562 17161579 4 246 2.5 1.0 1.8 1.4 274 chr2R 17161305 intergenic CG30457 - chr2R 17161442 intergenic not near genes chr2R 17161579 intergenic not near genes chr2R_4_17160001 chr2R_17160001 RAL-371_125b 1010 chr2R 17165731 17165738 chr2R 17165897 17165904 4 178 7.0 2.5 4.8 0.7 173 chr2R 17165731 exon CG10953 - chr2R 17165818 exon CG10953 - chr2R 17165904 exon CG10953 - chr2R_4_17165001 chr2R_17165001 RAL-371_125b 1011 chr2R 17176353 17176379 chr2R 17182593 17182619 diver 8 6240 0.0 11.5 5.8 1.2 6266 chr2R 17176353 intergenic not near genes chr2R 17179486 intergenic not near genes chr2R 17182619 intergenic not near genes chr2R_8_17175001 chr2R_17175001 RAL-371_125b 1012 chr2R 17236497 17236508 chr2R 17241719 17241759 copia 5 5245 7.0 2.0 4.5 0.9 5262 chr2R 17236497 intron mbl + chr2R 17239128 intron mbl + chr2R 17241759 intron mbl + chr2R_5_17235001 chr2R_17235001 RAL-371_125b 1013 chr2R 17263272 17263327 chr2R 17263403 17263457 4 128 1.5 4.5 3.0 1.0 185 chr2R 17263272 intron mbl + chr2R 17263364 intron mbl + chr2R 17263457 intron mbl + chr2R_4_17260001 chr2R_17260001 RAL-371_125b 1014 chr2R 17371227 17371268 chr2R 17371488 17371509 4 254 2.0 9.0 5.5 0.6 282 chr2R 17371227 intron mbl + chr2R 17371368 intron mbl + chr2R 17371509 intron mbl + chr2R_4_17370001 chr2R_17370001 RAL-371_125b 1015 chr2R 17381552 17381613 chr2R 17381690 17381751 8 137 3.0 8.0 5.5 1.2 199 chr2R 17381552 intergenic not near genes chr2R 17381652 intergenic not near genes chr2R 17381751 intergenic not near genes chr2R_8_17380001 chr2R_17380001 RAL-371_125b 1016 chr2R 17397769 17397818 chr2R 17397910 17397959 9 141 4.5 3.0 3.8 1.9 190 chr2R 17397769 intron Sip1 + chr2R 17397864 intron Sip1 + chr2R 17397959 intron Sip1 + chr2R_9_17395001 chr2R_17395001 RAL-371_125b 1017 chr2R 17458977 17459028 chr2R 17459112 17459163 13 135 5.0 4.0 4.5 2.4 186 chr2R 17458977 intron CG14478 + chr2R 17459070 intron CG14478 + chr2R 17459163 intron CG14478 + chr2R_13_17455001 chr2R_17455001 RAL-371_125b 1018 chr2R 17461241 17461294 chr2R 17461449 17461492 7 206 2.5 3.5 3.0 1.8 251 chr2R 17461241 intron CG14478 + chr2R 17461366 intron CG14478 + chr2R 17461492 intron CG14478 + chr2R_7_17460001 chr2R_17460001 RAL-371_125b 1019 chr2R 17485871 17485946 chr2R 17490691 17490757 F-element 14 4816 2.5 2.0 2.2 4.4 4886 chr2R 17485871 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488314 intron NT5E-2 + chr2R 17490757 intron NT5E-2 + chr2R_14_17485001 chr2R_17485001 RAL-371_125b 1020 chr2R 17561562 17561600 chr2R 17561691 17561729 10 129 6.5 4.0 5.2 1.6 167 chr2R 17561562 exon Klp54D + chr2R 17561646 intron Klp54D + chr2R 17561729 exon Klp54D + chr2R_10_17560001 chr2R_17560001 RAL-371_125b 1021 chr2R 17643956 17643965 chr2R 17644076 17644091 4 124 1.5 4.0 2.8 1.1 135 chr2R 17643956 intergenic not near genes chr2R 17644024 intergenic not near genes chr2R 17644091 intergenic not near genes chr2R_4_17640001 chr2R_17640001 RAL-371_125b 1022 chr2R 17699475 17699541 chr2R 17699627 17699633 15 146 4.0 5.0 4.5 2.7 158 chr2R 17699475 intron Uhg1 + chr2R 17699554 intron Uhg1 + chr2R 17699633 intron Uhg1 + chr2R_15_17695001 chr2R_17695001 RAL-371_125b 1023 chr2R 17709968 17710010 chr2R 17710108 17710150 5 140 2.0 4.0 3.0 1.2 182 chr2R 17709968 intron CG6424 - chr2R 17710059 intron CG6424 - chr2R 17710150 intron CG6424 - chr2R_5_17710001 chr2R_17710001 RAL-371_125b 1024 chr2R 17730602 17730658 chr2R 17730730 17730786 9 128 5.5 2.0 3.8 1.9 184 chr2R 17730602 intron,intron CG4975 +,CG4984 + chr2R 17730694 intron,intron CG4975 +,CG4984 + chr2R 17730786 intron,intron CG4975 +,CG4984 + chr2R_9_17730001 chr2R_17730001 RAL-371_125b 1025 chr2R 17782344 17782379 chr2R 17783597 17783632 pogo 8 1253 2.0 3.5 2.8 2.1 1288 chr2R 17782344 intergenic CG33981 -,fab1 - chr2R 17782988 intergenic not near genes chr2R 17783632 intergenic mir-31a - chr2R_8_17780001 chr2R_17780001 RAL-371_125b 1026 chr2R 17783982 17784043 chr2R 17784273 17784334 pogo 12 290 5.0 6.0 5.5 1.8 352 chr2R 17783982 intergenic mir-31a - chr2R 17784158 intergenic mir-31a - chr2R 17784334 intergenic mir-31a - chr2R_12_17780001 chr2R_17780001 RAL-371_125b 1027 chr2R 17785052 17785073 chr2R 17785190 17785211 5 138 5.0 9.0 7.0 0.6 159 chr2R 17785052 intergenic not near genes chr2R 17785132 intergenic not near genes chr2R 17785211 intergenic not near genes chr2R_5_17785001 chr2R_17785001 RAL-371_125b 1028 chr2R 17966127 17966174 chr2R 17966238 17966269 5 118 3.0 4.5 3.8 1.0 142 chr2R 17966127 intergenic not near genes chr2R 17966198 intergenic not near genes chr2R 17966269 intergenic not near genes chr2R_5_17965001 chr2R_17965001 RAL-371_125b 1029 chr2R 17997019 17997099 chr2R 17997177 17997247 17 151 15.5 15.5 15.5 1.0 228 chr2R 17997019 intron dpr13 - chr2R 17997133 intron dpr13 - chr2R 17997247 intron dpr13 - chr2R_17_17995001 chr2R_17995001 RAL-371_125b 1030 chr2R 18042785 18042986 chr2R 18042944 18043128 4 155 0.0 0.0 0.0 4.0 343 chr2R 18042785 3` UTR CG5773 - chr2R 18042956 3` UTR CG5773 - chr2R 18043128 exon CG5773 - chr2R_4_18040001 chr2R_18040001 RAL-371_125b 1031 chr2R 18045253 18045290 chr2R 18045391 18045428 13 138 7.5 3.5 5.5 2.0 175 chr2R 18045253 intergenic CG5770 - chr2R 18045340 intergenic CG5770 - chr2R 18045428 intergenic CG5770 - chr2R_13_18045001 chr2R_18045001 RAL-371_125b 1032 chr2R 18045626 18045684 chr2R 18046028 18046086 jockey 8 402 5.5 1.5 3.5 1.8 460 chr2R 18045626 intergenic not near genes chr2R 18045856 intergenic not near genes chr2R 18046086 intergenic CG5767 - chr2R_8_18045001 chr2R_18045001 RAL-371_125b 1033 chr2R 18089145 18089182 chr2R 18089307 18089344 6 162 3.5 3.0 3.2 1.4 199 chr2R 18089145 intron CG34386 + chr2R 18089244 intron CG34386 + chr2R 18089344 intron CG34386 + chr2R_6_18085001 chr2R_18085001 RAL-371_125b 1034 chr2R 18111649 18111699 chr2R 18115567 18115617 F-element 7 3918 6.0 5.5 5.8 1.0 3968 chr2R 18111649 intergenic not near genes chr2R 18113633 intergenic not near genes chr2R 18115617 intergenic not near genes chr2R_7_18110001 chr2R_18110001 RAL-371_125b 1035 chr2R 18124299 18124356 chr2R 18124426 18124483 11 124 5.0 2.0 3.5 2.4 184 chr2R 18124299 intron stau - chr2R 18124391 intron stau - chr2R 18124483 intron stau - chr2R_11_18120001 chr2R_18120001 RAL-371_125b 1036 chr2R 18197249 18197322 chr2R 18197383 18197448 12 132 2.0 7.0 4.5 2.2 199 chr2R 18197249 intergenic not near genes chr2R 18197348 intergenic not near genes chr2R 18197448 intergenic not near genes chr2R_12_18195001 chr2R_18195001 RAL-371_125b 1037 chr2R 18268561 18268625 chr2R 18268692 18268757 8 130 3.5 2.5 3.0 2.0 196 chr2R 18268561 intergenic not near genes chr2R 18268659 intergenic not near genes chr2R 18268757 intergenic not near genes chr2R_8_18265001 chr2R_18265001 RAL-371_125b 1038 chr2R 18343413 18343465 chr2R 18343546 18343598 11 133 5.0 8.5 6.8 1.4 185 chr2R 18343413 intron sbb - chr2R 18343506 intron sbb - chr2R 18343598 intron sbb - chr2R_11_18340001 chr2R_18340001 RAL-371_125b 1039 chr2R 18358349 18358412 chr2R 18372611 18372641 roo 16 14259 4.0 6.5 5.2 2.6 14292 chr2R 18358349 intergenic not near genes chr2R 18365495 intergenic not near genes chr2R 18372641 intergenic not near genes chr2R_16_18365001 chr2R_18365001 RAL-371_125b 1040 chr2R 18390822 18390855 chr2R 18390959 18390992 7 137 5.5 3.5 4.5 1.3 170 chr2R 18390822 intergenic CG15068 - chr2R 18390907 intergenic CG15068 - chr2R 18390992 intergenic CG15068 - chr2R_7_18390001 chr2R_18390001 RAL-371_125b 1041 chr2R 18398677 18398684 chr2R 18402508 18402531 9 3833 25.0 3.0 14.0 0.6 3854 chr2R 18398677 exon GstE1 + chr2R 18400604 intergenic GstE3 +,GstE2 + chr2R 18402531 intergenic not near genes chr2R_9_18400001 chr2R_18400001 RAL-371_125b 1042 chr2R 18405760 18405781 chr2R 18405890 18405911 5 130 1.5 4.5 3.0 1.2 151 chr2R 18405760 intergenic GstE6 +,GstE5 + chr2R 18405836 intergenic GstE6 +,GstE5 + chr2R 18405911 intergenic GstE6 + chr2R_5_18405001 chr2R_18405001 RAL-371_125b 1043 chr2R 18408245 18408312 chr2R 18408416 18408479 15 168 2.5 5.0 3.8 3.1 234 chr2R 18408245 exon GstE8 + chr2R 18408362 exon GstE8 + chr2R 18408479 exon GstE8 + chr2R_15_18405001 chr2R_18405001 RAL-371_125b 1044 chr2R 18477741 18477760 chr2R 18477839 18477892 5 125 0.5 6.5 3.5 1.1 151 chr2R 18477741 intron CG30116 - chr2R 18477816 intron CG30116 - chr2R 18477892 intron CG30116 - chr2R_5_18475001 chr2R_18475001 RAL-371_125b 1045 chr2R 18487788 18487849 chr2R 18495289 18495303 blood 7 7494 1.0 2.0 1.5 2.8 7515 chr2R 18487788 intron CG30116 - chr2R 18491546 intron CG30116 - chr2R 18495303 intron CG30116 - chr2R_7_18490001 chr2R_18490001 RAL-371_125b 1046 chr2R 18528149 18528210 chr2R 18528277 18528345 14 130 3.0 3.0 3.0 3.5 196 chr2R 18528149 intron CG10924 + chr2R 18528247 intron CG10924 + chr2R 18528345 intron CG10924 + chr2R_14_18525001 chr2R_18525001 RAL-371_125b 1047 chr2R 18575811 18575826 chr2R 18581985 18582064 3S18 6 6214 2.5 2.0 2.2 1.9 6253 chr2R 18575811 intron GEFmeso - chr2R 18578938 intron GEFmeso - chr2R 18582064 intron GEFmeso - chr2R_6_18575001 chr2R_18575001 RAL-371_125b 1048 chr2R 18590822 18590894 chr2R 18600024 18600096 roo 8 9199 4.5 1.0 2.8 2.1 9274 chr2R 18590822 intron GEFmeso - chr2R 18595459 intron GEFmeso - chr2R 18600096 intron GEFmeso - chr2R_8_18595001 chr2R_18595001 RAL-371_125b 1049 chr2R 18646383 18646427 chr2R 18646578 18646613 10 192 5.0 5.0 5.0 1.7 230 chr2R 18646383 intron SP2637 - chr2R 18646498 intron SP2637 - chr2R 18646613 intron SP2637 - chr2R_10_18645001 chr2R_18645001 RAL-371_125b 1050 chr2R 18735513 18735574 chr2R 18735753 18735814 6 239 2.5 3.0 2.8 1.6 301 chr2R 18735513 intron Hs3st-A + chr2R 18735664 intron Hs3st-A + chr2R 18735814 intron Hs3st-A + chr2R_6_18735001 chr2R_18735001 RAL-371_125b 1051 chr2R 18769613 18769728 chr2R 18769924 18769985 5 300 0.0 3.0 1.5 2.0 372 chr2R 18769613 intron Mctp + chr2R 18769799 intron Mctp + chr2R 18769985 intron Mctp + chr2R_5_18765001 chr2R_18765001 RAL-371_125b 1052 chr2R 18827691 18827724 chr2R 18827821 18827854 11 130 1.0 6.5 3.8 2.3 163 chr2R 18827691 intron CG15097 - chr2R 18827772 intron CG15097 - chr2R 18827854 intron CG15097 - chr2R_11_18825001 chr2R_18825001 RAL-371_125b 1053 chr2R 18862302 18862406 chr2R 18862470 18862541 6 144 0.0 0.0 0.0 6.0 239 chr2R 18862302 intergenic Jheh3 - chr2R 18862422 intergenic Jheh3 -,CG43069 + chr2R 18862541 intergenic CG43069 +,Jheh3 - chr2R_6_18860001 chr2R_18860001 RAL-371_125b 1054 chr2R 18871606 18871662 chr2R 18871741 18871790 10 132 5.0 4.5 4.8 1.7 184 chr2R 18871606 intergenic not near genes chr2R 18871698 intergenic not near genes chr2R 18871790 intergenic not near genes chr2R_10_18870001 chr2R_18870001 RAL-371_125b 1055 chr2R 18953116 18953189 chr2R 18953253 18953326 11 137 6.0 2.5 4.2 2.1 210 chr2R 18953116 intron sano + chr2R 18953221 intron sano + chr2R 18953326 intron sano + chr2R_11_18950001 chr2R_18950001 RAL-371_125b 1056 chr2R 18964873 18964905 chr2R 18964999 18965025 5 125 6.0 3.0 4.5 0.9 152 chr2R 18964873 intergenic not near genes chr2R 18964949 intergenic not near genes chr2R 18965025 intergenic not near genes chr2R_5_18960001 chr2R_18960001 RAL-371_125b 1057 chr2R 18984436 18984495 chr2R 18984730 18984804 10 304 1.5 3.0 2.2 3.1 368 chr2R 18984436 intergenic not near genes chr2R 18984620 intergenic not near genes chr2R 18984804 intergenic not near genes chr2R_10_18980001 chr2R_18980001 RAL-371_125b 1058 chr2R 19007065 19007134 chr2R 19007215 19007228 10 132 1.5 3.0 2.2 3.1 163 chr2R 19007065 intron tn + chr2R 19007146 intron tn + chr2R 19007228 intron tn + chr2R_10_19005001 chr2R_19005001 RAL-371_125b 1059 chr2R 19012899 19012950 chr2R 19013043 19013094 16 143 1.5 3.0 2.2 5.0 195 chr2R 19012899 intergenic not near genes chr2R 19012996 intergenic not near genes chr2R 19013094 intergenic not near genes chr2R_16_19010001 chr2R_19010001 RAL-371_125b 1060 chr2R 19026002 19026058 chr2R 19026153 19026204 10 150 3.0 1.0 2.0 3.3 202 chr2R 19026002 exon 5-HT1B - chr2R 19026103 intron 5-HT1B - chr2R 19026204 intron 5-HT1B - chr2R_10_19025001 chr2R_19025001 RAL-371_125b 1061 chr2R 19042657 19042689 chr2R 19042786 19042812 6 125 11.0 10.0 10.5 0.5 155 chr2R 19042657 intergenic not near genes chr2R 19042734 intergenic not near genes chr2R 19042812 intergenic not near genes chr2R_6_19040001 chr2R_19040001 RAL-371_125b 1062 chr2R 19089913 19089964 chr2R 19090034 19090102 8 130 5.0 5.5 5.2 1.3 189 chr2R 19089913 5` UTR 5-HT1A + chr2R 19090008 5` UTR 5-HT1A + chr2R 19090102 5` UTR 5-HT1A + chr2R_8_19090001 chr2R_19090001 RAL-371_125b 1063 chr2R 19103393 19103430 chr2R 19103525 19103562 9 132 2.5 3.0 2.8 2.4 169 chr2R 19103393 intron 5-HT1A + chr2R 19103478 intron 5-HT1A + chr2R 19103562 intron 5-HT1A + chr2R_9_19100001 chr2R_19100001 RAL-371_125b 1064 chr2R 19283765 19283798 chr2R 19285303 19285336 11 1539 28.0 19.5 23.8 0.4 1571 chr2R 19283765 exon CG11906 - chr2R 19284550 3` UTR CG10476 - chr2R 19285336 intergenic CG10474 -,CG10476 - chr2R_11_19280001 chr2R_19280001 RAL-371_125b 1065 chr2R 19363137 19363202 chr2R 19363263 19363328 6 126 2.5 0.0 1.2 2.7 191 chr2R 19363137 intergenic not near genes chr2R 19363232 intergenic CG10051 + chr2R 19363328 intergenic CG10051 + chr2R_6_19360001 chr2R_19360001 RAL-371_125b 1066 chr2R 19522605 19522665 chr2R 19522734 19522794 17 129 4.0 5.0 4.5 3.1 189 chr2R 19522605 3` UTR sm - chr2R 19522700 3` UTR sm - chr2R 19522794 3` UTR sm - chr2R_17_19520001 chr2R_19520001 RAL-371_125b 1067 chr2R 19546184 19546246 chr2R 19546311 19546373 13 127 2.0 0.0 1.0 6.5 189 chr2R 19546184 intron sm - chr2R 19546278 intron sm - chr2R 19546373 intron sm - chr2R_13_19545001 chr2R_19545001 RAL-371_125b 1068 chr2R 19601188 19601252 chr2R 19601316 19601380 17 126 6.0 5.0 5.5 2.6 192 chr2R 19601188 intron sm - chr2R 19601284 intron sm - chr2R 19601380 intron sm - chr2R_17_19600001 chr2R_19600001 RAL-371_125b 1069 chr2R 19701473 19701531 chr2R 19701607 19701665 17 134 3.0 3.0 3.0 4.2 192 chr2R 19701473 intergenic Obp56c - chr2R 19701569 intergenic Obp56c - chr2R 19701665 intergenic not near genes chr2R_17_19700001 chr2R_19700001 RAL-371_125b 1070 chr2R 19707694 19707754 chr2R 19707891 19707946 7 195 5.0 1.5 3.2 1.7 252 chr2R 19707694 intergenic not near genes chr2R 19707820 intergenic not near genes chr2R 19707946 intergenic not near genes chr2R_7_19705001 chr2R_19705001 RAL-371_125b 1071 chr2R 19715821 19715853 chr2R 19723340 19723372 blood 11 7516 8.5 7.0 7.8 1.2 7551 chr2R 19715821 intergenic not near genes chr2R 19719596 intergenic not near genes chr2R 19723372 intergenic not near genes chr2R_11_19715001 chr2R_19715001 RAL-371_125b 1072 chr2R 19776555 19776615 chr2R 19779928 19779988 jockey 11 3372 4.5 5.5 5.0 1.8 3433 chr2R 19776555 intergenic not near genes chr2R 19778272 intergenic not near genes chr2R 19779988 intergenic not near genes chr2R_11_19775001 chr2R_19775001 RAL-371_125b 1073 chr2R 19807650 19807703 chr2R 19807777 19807834 10 131 3.0 7.0 5.0 1.7 184 chr2R 19807650 intergenic not near genes chr2R 19807742 intergenic not near genes chr2R 19807834 intergenic not near genes chr2R_10_19805001 chr2R_19805001 RAL-371_125b 1074 chr2R 19816030 19816117 chr2R 19816208 19816274 4 162 0.0 0.0 0.0 4.0 244 chr2R 19816030 exon Obp56h + chr2R 19816152 3` UTR Obp56h + chr2R 19816274 intergenic Obp56h + chr2R_4_19815001 chr2R_19815001 RAL-371_125b 1075 chr2R 19821667 19821730 chr2R 19821797 19821817 17 127 3.5 2.5 3.0 4.2 150 chr2R 19821667 intergenic not near genes chr2R 19821742 intergenic not near genes chr2R 19821817 intergenic not near genes chr2R_17_19820001 chr2R_19820001 RAL-371_125b 1076 chr2R 19957395 19957450 chr2R 19962647 19962702 copia 5 5249 2.5 3.5 3.0 1.2 5307 chr2R 19957395 intergenic CG44623 + chr2R 19960048 intergenic not near genes chr2R 19962702 intergenic not near genes chr2R_5_19960001 chr2R_19960001 RAL-371_125b 1077 chr2R 20019173 20019219 chr2R 20019318 20019319 11 133 2.0 2.0 2.0 3.7 146 chr2R 20019173 intergenic not near genes chr2R 20019246 intergenic not near genes chr2R 20019319 intergenic not near genes chr2R_11_20015001 chr2R_20015001 RAL-371_125b 1078 chr2R 20069233 20069249 chr2R 20071875 20071939 opus 5 2678 0.0 2.5 1.2 2.3 2706 chr2R 20069233 intergenic not near genes chr2R 20070586 intergenic not near genes chr2R 20071939 intergenic not near genes chr2R_5_20070001 chr2R_20070001 RAL-371_125b 1079 chr2R 20080600 20080625 chr2R 20080727 20080752 5 127 1.0 15.5 8.2 0.5 152 chr2R 20080600 intergenic not near genes chr2R 20080676 intergenic not near genes chr2R 20080752 intergenic not near genes chr2R_5_20080001 chr2R_20080001 RAL-371_125b 1080 chr2R 20080684 20080762 chr2R 20082114 20082194 11 1432 24.5 24.0 24.2 0.4 1510 chr2R 20080684 intergenic not near genes chr2R 20081439 intergenic not near genes chr2R 20082194 intergenic not near genes chr2R_11_20080001 chr2R_20080001 RAL-371_125b 1081 chr2R 20087978 20088027 chr2R 20088136 20088185 1360 5 158 1.5 2.5 2.0 1.7 207 chr2R 20087978 intergenic not near genes chr2R 20088082 intergenic not near genes chr2R 20088185 intergenic not near genes chr2R_5_20085001 chr2R_20085001 RAL-371_125b 1082 chr2R 20142431 20142482 chr2R 20142560 20142608 5 128 1.5 3.5 2.5 1.4 177 chr2R 20142431 intergenic not near genes chr2R 20142520 intergenic not near genes chr2R 20142608 intergenic not near genes chr2R_5_20140001 chr2R_20140001 RAL-371_125b 1083 chr2R 20161923 20161970 chr2R 20162060 20162107 14 137 3.5 4.0 3.8 2.9 184 chr2R 20161923 intergenic not near genes chr2R 20162015 intergenic not near genes chr2R 20162107 intergenic not near genes chr2R_14_20160001 chr2R_20160001 RAL-371_125b 1084 chr2R 20196725 20196769 chr2R 20196884 20196932 4 162 3.0 0.0 1.5 1.6 207 chr2R 20196725 intergenic not near genes chr2R 20196828 intergenic not near genes chr2R 20196932 intergenic not near genes chr2R_4_20195001 chr2R_20195001 RAL-371_125b 1085 chr2R 20326733 20326781 chr2R 20326855 20326861 9 121 4.0 0.5 2.2 2.8 128 chr2R 20326733 5` UTR MED8 - chr2R 20326797 5` UTR MED8 - chr2R 20326861 intergenic MED8 -,CG8929 + chr2R_9_20325001 chr2R_20325001 RAL-371_125b 1086 chr2R 20382300 20382355 chr2R 20382422 20382489 13 131 5.0 3.5 4.2 2.5 189 chr2R 20382300 intergenic not near genes chr2R 20382394 intergenic not near genes chr2R 20382489 intergenic not near genes chr2R_13_20380001 chr2R_20380001 RAL-371_125b 1087 chr2R 20395005 20395055 chr2R 20395231 20395281 9 226 1.0 1.5 1.2 4.1 276 chr2R 20395005 intergenic not near genes chr2R 20395143 intergenic not near genes chr2R 20395281 intergenic not near genes chr2R_9_20395001 chr2R_20395001 RAL-371_125b 1088 chr2R 20463633 20463693 chr2R 20463753 20463807 19 123 2.5 4.0 3.2 4.5 174 chr2R 20463633 intron CG12484 + chr2R 20463720 intron CG12484 + chr2R 20463807 intron CG12484 + chr2R_19_20460001 chr2R_20460001 RAL-371_125b 1089 chr2R 20483865 20483925 chr2R 20484287 20484338 15 420 2.5 4.0 3.2 3.6 473 chr2R 20483865 intergenic not near genes chr2R 20484102 intergenic not near genes chr2R 20484338 intergenic not near genes chr2R_15_20480001 chr2R_20480001 RAL-371_125b 1090 chr2R 20502252 20502309 chr2R 20502416 20502490 7 171 3.0 0.0 1.5 2.8 238 chr2R 20502252 intergenic not near genes chr2R 20502371 intergenic not near genes chr2R 20502490 intergenic not near genes chr2R_7_20500001 chr2R_20500001 RAL-371_125b 1091 chr2R 20508130 20508204 chr2R 20508258 20508296 12 113 2.0 3.0 2.5 3.4 166 chr2R 20508130 intergenic CR44646 + chr2R 20508213 intergenic CR44646 + chr2R 20508296 intergenic CR44646 + chr2R_12_20505001 chr2R_20505001 RAL-371_125b 1092 chr2R 20541955 20541994 chr2R 20542083 20542122 10 128 6.0 4.5 5.2 1.6 167 chr2R 20541955 intergenic not near genes chr2R 20542038 intergenic not near genes chr2R 20542122 intergenic not near genes chr2R_10_20540001 chr2R_20540001 RAL-371_125b 1093 chr2R 20557672 20557681 chr2R 20557814 20557818 4 141 8.0 4.0 6.0 0.6 146 chr2R 20557672 intron lms + chr2R 20557745 intron lms + chr2R 20557818 intron lms + chr2R_4_20555001 chr2R_20555001 RAL-371_125b 1094 chr2R 20557691 20557743 chr2R 20557813 20557869 10 137 1.5 4.0 2.8 2.6 178 chr2R 20557691 intron lms + chr2R 20557780 intron lms + chr2R 20557869 intron lms + chr2R_10_20555001 chr2R_20555001 RAL-371_125b 1095 chr2R 20572487 20572542 chr2R 20572637 20572692 12 150 3.5 3.0 3.2 2.9 205 chr2R 20572487 intron qsm - chr2R 20572590 intron qsm - chr2R 20572692 intron qsm - chr2R_12_20570001 chr2R_20570001 RAL-371_125b 1096 chr2R 20578619 20578678 chr2R 20578758 20578797 5 135 2.5 5.0 3.8 1.0 178 chr2R 20578619 intron qsm - chr2R 20578708 intron qsm - chr2R 20578797 intron qsm - chr2R_5_20575001 chr2R_20575001 RAL-371_125b 1097 chr2R 20601674 20601746 chr2R 20601809 20601881 10 132 4.0 3.0 3.5 2.2 207 chr2R 20601674 intron bl + chr2R 20601778 intron bl + chr2R 20601881 intron bl + chr2R_10_20600001 chr2R_20600001 RAL-371_125b 1098 chr2R 20667324 20667338 chr2R 20667485 20667500 4 162 12.5 14.0 13.2 0.3 176 chr2R 20667324 intergenic Fem-1 -,exu - chr2R 20667412 intergenic exu -,Fem-1 - chr2R 20667500 3` UTR exu - chr2R_4_20665001 chr2R_20665001 RAL-371_125b 1099 chr2R 20739402 20739477 chr2R 20744220 20744244 F-element 16 4809 3.0 0.5 1.8 5.7 4842 chr2R 20739402 intron dpr + chr2R 20741823 intron dpr + chr2R 20744244 intron dpr + chr2R_16_20740001 chr2R_20740001 RAL-371_125b 1100 chr2R 20757423 20757458 chr2R 20757550 20757585 10 125 3.0 5.0 4.0 2.0 162 chr2R 20757423 intergenic not near genes chr2R 20757504 intergenic not near genes chr2R 20757585 intergenic not near genes chr2R_10_20755001 chr2R_20755001 RAL-371_125b 1101 chr2R 20759751 20759814 chr2R 20759877 20759922 6 123 0.0 5.0 2.5 1.7 171 chr2R 20759751 intergenic not near genes chr2R 20759836 intergenic not near genes chr2R 20759922 intergenic not near genes chr2R_6_20755001 chr2R_20755001 RAL-371_125b 1102 chr2R 20783275 20783300 chr2R 20788097 20788122 F-element 6 4822 6.0 4.5 5.2 1.0 4847 chr2R 20783275 intergenic not near genes chr2R 20785698 intergenic not near genes chr2R 20788122 intergenic CG43666 - chr2R_6_20785001 chr2R_20785001 RAL-371_125b 1103 chr2R 20853642 20853700 chr2R 20853771 20853829 9 129 4.0 4.5 4.2 1.7 187 chr2R 20853642 intergenic not near genes chr2R 20853736 intergenic not near genes chr2R 20853829 intergenic not near genes chr2R_9_20850001 chr2R_20850001 RAL-371_125b 1104 chr2R 20964882 20964921 chr2R 20965018 20965057 4 136 4.0 4.0 4.0 0.8 175 chr2R 20964882 intergenic not near genes chr2R 20964970 intergenic not near genes chr2R 20965057 intergenic not near genes chr2R_4_20960001 chr2R_20960001 RAL-371_125b 1105 chr2R 20964925 20964943 chr2R 20965000 20965073 4 119 2.5 3.5 3.0 1.0 148 chr2R 20964925 intergenic not near genes chr2R 20964999 intergenic not near genes chr2R 20965073 intergenic not near genes chr2R_4_20960001 chr2R_20960001 RAL-371_125b 1106 chr2R 21027607 21027669 chr2R 21027751 21027813 7 144 3.5 2.5 3.0 1.8 206 chr2R 21027607 intergenic not near genes chr2R 21027710 intergenic not near genes chr2R 21027813 intergenic not near genes chr2R_7_21025001 chr2R_21025001 RAL-371_125b 1107 chr2R 21103495 21103533 chr2R 21103625 21103663 11 130 6.5 0.0 3.2 2.6 168 chr2R 21103495 intron ktub + chr2R 21103579 intron ktub + chr2R 21103663 intron ktub + chr2R_11_21100001 chr2R_21100001 RAL-371_125b 1108 chr2R 21151101 21151145 chr2R 21153763 21153828 opus 5 2676 0.0 2.5 1.2 2.3 2727 chr2R 21151101 intron CG30389 - chr2R 21152464 intron CG30389 - chr2R 21153828 intron CG30389 - chr2R_5_21150001 chr2R_21150001 RAL-371_125b 1109 chr2R 21158846 21158906 chr2R 21159020 21159080 6 173 2.0 3.5 2.8 1.6 234 chr2R 21158846 intron CG30389 - chr2R 21158963 intron CG30389 - chr2R 21159080 intron CG30389 - chr2R_6_21155001 chr2R_21155001 RAL-371_125b 1110 chr2R 21285382 21285436 chr2R 21285509 21285563 16 125 6.0 5.5 5.8 2.4 181 chr2R 21285382 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285472 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285563 3` UTR,3` UTR MFS16 +,CG10505 - chr2R_16_21285001 chr2R_21285001 RAL-371_125b 1111 chr2R 21363138 21363171 chr2R 21363286 21363310 4 146 0.0 8.0 4.0 0.8 172 chr2R 21363138 intron cv-2 - chr2R 21363224 intron cv-2 - chr2R 21363310 intron cv-2 - chr2R_4_21360001 chr2R_21360001 RAL-371_125b 1112 chr2R 21491239 21491275 chr2R 21491367 21491403 7 126 3.0 3.0 3.0 1.8 164 chr2R 21491239 intron Fkbp14 - chr2R 21491321 intron Fkbp14 - chr2R 21491403 intron Fkbp14 - chr2R_7_21490001 chr2R_21490001 RAL-371_125b 1113 chr2R 21494937 21495001 chr2R 21495105 21495169 11 167 3.5 3.0 3.2 2.6 232 chr2R 21494937 intron Fkbp14 - chr2R 21495053 intron Fkbp14 - chr2R 21495169 exon Fkbp14 - chr2R_11_21495001 chr2R_21495001 RAL-371_125b 1114 chr2R 21532846 21532875 chr2R 21532974 21533003 6 127 3.0 3.5 3.2 1.4 157 chr2R 21532846 intron Egfr + chr2R 21532924 intron Egfr + chr2R 21533003 intron Egfr + chr2R_6_21530001 chr2R_21530001 RAL-371_125b 1115 chr2R 21540669 21540685 chr2R 21540937 21540953 4 268 4.5 4.5 4.5 0.7 284 chr2R 21540669 intron Egfr + chr2R 21540811 intron Egfr + chr2R 21540953 intron Egfr + chr2R_4_21540001 chr2R_21540001 RAL-371_125b 1116 chr2R 21578714 21578757 chr2R 21578849 21578892 9 135 3.0 5.5 4.2 1.7 178 chr2R 21578714 intergenic not near genes chr2R 21578803 intergenic not near genes chr2R 21578892 intergenic not near genes chr2R_9_21575001 chr2R_21575001 RAL-371_125b 1117 chr2R 21641951 21641996 chr2R 21642080 21642123 5 124 5.0 2.5 3.8 1.0 172 chr2R 21641951 intergenic not near genes chr2R 21642037 intergenic not near genes chr2R 21642123 intergenic not near genes chr2R_5_21640001 chr2R_21640001 RAL-371_125b 1118 chr2R 21659623 21659679 chr2R 21659905 21659966 9 272 16.0 13.5 14.8 0.6 343 chr2R 21659623 exon Rae1 - chr2R 21659794 exon Rae1 - chr2R 21659966 5` UTR Rae1 - chr2R_9_21655001 chr2R_21655001 RAL-371_125b 1119 chr2R 21726666 21726677 chr2R 21726847 21726858 7 181 6.5 3.5 5.0 1.2 192 chr2R 21726666 intergenic not near genes chr2R 21726762 intergenic not near genes chr2R 21726858 intergenic not near genes chr2R_7_21725001 chr2R_21725001 RAL-371_125b 1120 chr2R 21732138 21732159 chr2R 21732273 21732294 4 135 0.0 5.0 2.5 1.1 156 chr2R 21732138 intergenic not near genes chr2R 21732216 intergenic not near genes chr2R 21732294 intergenic not near genes chr2R_4_21730001 chr2R_21730001 RAL-371_125b 1121 chr2R 21738231 21738265 chr2R 21747441 21747461 roo 4 9203 5.0 1.5 3.2 1.0 9230 chr2R 21738231 intergenic not near genes chr2R 21742846 intergenic not near genes chr2R 21747461 intergenic not near genes chr2R_4_21740001 chr2R_21740001 RAL-371_125b 1122 chr2R 21752094 21752150 chr2R 21752222 21752278 7 127 4.0 5.0 4.5 1.3 184 chr2R 21752094 intergenic not near genes chr2R 21752186 intergenic not near genes chr2R 21752278 intergenic not near genes chr2R_7_21750001 chr2R_21750001 RAL-371_125b 1123 chr2R 21753052 21753110 chr2R 21753581 21753645 roo 13 530 4.5 6.0 5.2 2.1 593 chr2R 21753052 intergenic not near genes chr2R 21753348 intergenic not near genes chr2R 21753645 intergenic not near genes chr2R_13_21750001 chr2R_21750001 RAL-371_125b 1124 chr2R 21759511 21759579 chr2R 21759647 21759716 17 133 1.5 3.0 2.2 5.3 205 chr2R 21759511 intergenic not near genes chr2R 21759614 intergenic not near genes chr2R 21759716 intergenic not near genes chr2R_17_21755001 chr2R_21755001 RAL-371_125b 1125 chr2R 21768318 21768390 chr2R 21768452 21768524 9 133 4.0 2.5 3.2 2.1 206 chr2R 21768318 exon CG30395 + chr2R 21768421 intron CG30395 + chr2R 21768524 exon CG30395 + chr2R_9_21765001 chr2R_21765001 RAL-371_125b 1126 chr2R 21776049 21776129 chr2R 21776189 21776264 6 137 0.5 2.5 1.5 2.4 215 chr2R 21776049 intergenic not near genes chr2R 21776156 intergenic not near genes chr2R 21776264 intergenic not near genes chr2R_6_21775001 chr2R_21775001 RAL-371_125b 1127 chr2R 21802422 21802445 chr2R 21802563 21802586 5 141 4.0 7.5 5.8 0.7 164 chr2R 21802422 intergenic not near genes chr2R 21802504 intergenic not near genes chr2R 21802586 intergenic not near genes chr2R_5_21800001 chr2R_21800001 RAL-371_125b 1128 chr2R 21809488 21809550 chr2R 21817778 21817816 roo 6 8286 4.0 5.0 4.5 1.1 8328 chr2R 21809488 intergenic not near genes chr2R 21813652 intergenic not near genes chr2R 21817816 intergenic not near genes chr2R_6_21810001 chr2R_21810001 RAL-371_125b 1129 chr2R 21857297 21857372 chr2R 21857437 21857513 15 139 3.0 4.0 3.5 3.3 216 chr2R 21857297 intergenic not near genes chr2R 21857405 intergenic not near genes chr2R 21857513 intergenic not near genes chr2R_15_21855001 chr2R_21855001 RAL-371_125b 1130 chr2R 21888249 21888259 chr2R 21888409 21888420 4 161 1.5 4.0 2.8 1.1 171 chr2R 21888249 intron Fili + chr2R 21888334 intron Fili + chr2R 21888420 intron Fili + chr2R_4_21885001 chr2R_21885001 RAL-371_125b 1131 chr2R 21906223 21906294 chr2R 21906374 21906445 14 148 2.0 3.0 2.5 4.0 222 chr2R 21906223 intron Fili + chr2R 21906334 intron Fili + chr2R 21906445 intron Fili + chr2R_14_21905001 chr2R_21905001 RAL-371_125b 1132 chr2R 21938155 21938222 chr2R 21938287 21938354 13 129 3.0 3.0 3.0 3.2 199 chr2R 21938155 intron Fili + chr2R 21938254 intron Fili + chr2R 21938354 intron Fili + chr2R_13_21935001 chr2R_21935001 RAL-371_125b 1133 chr2R 22012945 22012994 chr2R 22013090 22013139 17 144 2.5 5.0 3.8 3.5 194 chr2R 22012945 intron CG34370 - chr2R 22013042 intron CG34370 - chr2R 22013139 intron CG34370 - chr2R_17_22010001 chr2R_22010001 RAL-371_125b 1134 chr2R 22029480 22029512 chr2R 22029608 22029640 13 128 3.0 0.0 1.5 5.2 160 chr2R 22029480 intron CG34370 - chr2R 22029560 intron CG34370 - chr2R 22029640 intron CG34370 - chr2R_13_22025001 chr2R_22025001 RAL-371_125b 1135 chr2R 22035501 22035564 chr2R 22035638 22035701 14 136 5.0 4.5 4.8 2.4 200 chr2R 22035501 intron,exon CG34370 -,CG9308 + chr2R 22035601 intron,3` UTR CG34370 -,CG9308 + chr2R 22035701 intron CG34370 - chr2R_14_22035001 chr2R_22035001 RAL-371_125b 1136 chr2R 22118378 22118445 chr2R 22118506 22118573 11 128 3.5 2.5 3.0 2.8 195 chr2R 22118378 intron Vrp1 - chr2R 22118476 intron Vrp1 - chr2R 22118573 intron Vrp1 - chr2R_11_22115001 chr2R_22115001 RAL-371_125b 1137 chr2R 22124261 22124328 chr2R 22124400 22124467 10 134 5.0 3.5 4.2 1.9 206 chr2R 22124261 exon mei-S332 + chr2R 22124364 3` UTR mei-S332 + chr2R 22124467 intergenic GM130 -,mei-S332 + chr2R_10_22120001 chr2R_22120001 RAL-371_125b 1138 chr2R 22132250 22132277 chr2R 22132380 22132407 7 130 4.0 5.0 4.5 1.3 157 chr2R 22132250 intergenic not near genes chr2R 22132328 intergenic not near genes chr2R 22132407 intergenic not near genes chr2R_7_22130001 chr2R_22130001 RAL-371_125b 1139 chr2R 22259607 22259620 chr2R 22259738 22259751 5 131 4.5 9.5 7.0 0.6 144 chr2R 22259607 intron dve + chr2R 22259679 intron dve + chr2R 22259751 intron dve + chr2R_5_22255001 chr2R_22255001 RAL-371_125b 1140 chr2R 22349650 22349704 chr2R 22351483 22351538 jockey 10 1829 8.0 4.5 6.2 1.4 1888 chr2R 22349650 intron Liprin-gamma - chr2R 22350594 intron Liprin-gamma - chr2R 22351538 intron Liprin-gamma - chr2R_10_22350001 chr2R_22350001 RAL-371_125b 1141 chr2R 22380318 22380385 chr2R 22380459 22380526 7 141 2.0 0.0 1.0 3.5 208 chr2R 22380318 intron wrapper + chr2R 22380422 intron wrapper + chr2R 22380526 intron wrapper + chr2R_7_22380001 chr2R_22380001 RAL-371_125b 1142 chr2R 22460338 22460397 chr2R 22460463 22460526 6 128 2.5 2.5 2.5 1.7 188 chr2R 22460338 intron CG10384 + chr2R 22460432 intron CG10384 + chr2R 22460526 intron CG10384 + chr2R_6_22460001 chr2R_22460001 RAL-371_125b 1143 chr2R 22503857 22503890 chr2R 22504002 22504035 6 145 1.0 5.0 3.0 1.5 178 chr2R 22503857 intron px - chr2R 22503946 intron px - chr2R 22504035 intron px - chr2R_6_22500001 chr2R_22500001 RAL-371_125b 1144 chr2R 22525702 22525766 chr2R 22529306 22529370 jockey 10 3603 0.0 4.0 2.0 3.3 3668 chr2R 22525702 intron px - chr2R 22527536 intron px - chr2R 22529370 intron px - chr2R_10_22525001 chr2R_22525001 RAL-371_125b 1145 chr2R 22532123 22532144 chr2R 22532264 22532285 8 138 8.5 1.0 4.8 1.4 162 chr2R 22532123 intron px - chr2R 22532204 intron px - chr2R 22532285 intron px - chr2R_8_22530001 chr2R_22530001 RAL-371_125b 1146 chr2R 22532146 22532159 chr2R 22532262 22532300 4 134 8.0 1.0 4.5 0.7 154 chr2R 22532146 intron px - chr2R 22532223 intron px - chr2R 22532300 intron px - chr2R_4_22530001 chr2R_22530001 RAL-371_125b 1147 chr2R 22545582 22545631 chr2R 22545711 22545760 5 127 5.0 4.5 4.8 0.9 178 chr2R 22545582 intron px - chr2R 22545671 intron px - chr2R 22545760 intron px - chr2R_5_22545001 chr2R_22545001 RAL-371_125b 1148 chr2R 22580390 22580443 chr2R 22586584 22586637 diver 6 6194 1.5 1.5 1.5 2.4 6247 chr2R 22580390 intron dnr1 - chr2R 22583514 intron dnr1 - chr2R 22586637 intron dnr1 - chr2R_6_22580001 chr2R_22580001 RAL-371_125b 1149 chr2R 22629370 22629392 chr2R 22629497 22629519 4 127 2.5 1.5 2.0 1.3 149 chr2R 22629370 intron CG33143 + chr2R 22629444 intron CG33143 + chr2R 22629519 intron CG33143 + chr2R_4_22625001 chr2R_22625001 RAL-371_125b 1150 chr2R 22654323 22654393 chr2R 22654453 22654523 8 131 4.0 6.0 5.0 1.3 200 chr2R 22654323 exon Cyp6d2 - chr2R 22654423 5` UTR Cyp6d2 - chr2R 22654523 5` UTR Cyp6d2 - chr2R_8_22650001 chr2R_22650001 RAL-371_125b 1151 chr2R 22729415 22729465 chr2R 22729673 22729723 INE-1 7 258 5.0 4.0 4.5 1.3 308 chr2R 22729415 intron jbug - chr2R 22729569 intron jbug - chr2R 22729723 intron jbug - chr2R_7_22725001 chr2R_22725001 RAL-371_125b 1152 chr2R 22774921 22774988 chr2R 22775390 22775457 jockey 11 468 4.0 6.5 5.2 1.8 536 chr2R 22774921 intron CG42260 - chr2R 22775189 intron CG42260 - chr2R 22775457 intron CG42260 - chr2R_11_22775001 chr2R_22775001 RAL-371_125b 1153 chr2R 22777947 22777992 chr2R 22778109 22778154 7 162 3.0 1.5 2.2 2.2 207 chr2R 22777947 intron CG42260 - chr2R 22778050 intron CG42260 - chr2R 22778154 intron CG42260 - chr2R_7_22775001 chr2R_22775001 RAL-371_125b 1154 chr2R 22787550 22787589 chr2R 22787733 22787772 9 183 3.0 4.0 3.5 2.0 222 chr2R 22787550 intron CG42260 - chr2R 22787661 intron CG42260 - chr2R 22787772 intron CG42260 - chr2R_9_22785001 chr2R_22785001 RAL-371_125b 1155 chr2R 22842990 22843038 chr2R 22845002 22845050 flea 8 2012 4.5 4.5 4.5 1.5 2060 chr2R 22842990 intergenic CG9826 + chr2R 22844020 intergenic not near genes chr2R 22845050 intergenic not near genes chr2R_8_22840001 chr2R_22840001 RAL-371_125b 1156 chr2R 22991583 22991650 chr2R 22991725 22991792 7 140 3.0 2.0 2.5 2.0 209 chr2R 22991583 intron twi + chr2R 22991688 intron twi + chr2R 22991792 intron twi + chr2R_7_22990001 chr2R_22990001 RAL-371_125b 1157 chr2R 23052610 23052676 chr2R 23052736 23052802 12 124 3.5 6.0 4.8 2.1 192 chr2R 23052610 intergenic not near genes chr2R 23052706 intergenic not near genes chr2R 23052802 intergenic not near genes chr2R_12_23050001 chr2R_23050001 RAL-371_125b 1158 chr2R 23061709 23061757 chr2R 23061871 23061912 12 166 2.5 6.5 4.5 2.2 203 chr2R 23061709 3` UTR l(2)06496 - chr2R 23061810 3` UTR l(2)06496 - chr2R 23061912 3` UTR l(2)06496 - chr2R_12_23060001 chr2R_23060001 RAL-371_125b 1159 chr2R 23134798 23134837 chr2R 23134931 23134970 7 133 3.5 5.5 4.5 1.3 172 chr2R 23134798 intergenic not near genes chr2R 23134884 intergenic not near genes chr2R 23134970 intergenic not near genes chr2R_7_23130001 chr2R_23130001 RAL-371_125b 1160 chr2R 23138404 23138458 chr2R 23138539 23138593 12 135 2.0 3.0 2.5 3.4 189 chr2R 23138404 intergenic CG30192 + chr2R 23138498 intergenic CG30192 + chr2R 23138593 5` UTR CG30192 + chr2R_12_23135001 chr2R_23135001 RAL-371_125b 1161 chr2R 23146143 23146204 chr2R 23146283 23146292 10 130 6.5 5.0 5.8 1.5 149 chr2R 23146143 intergenic not near genes chr2R 23146218 intergenic not near genes chr2R 23146292 intergenic not near genes chr2R_10_23145001 chr2R_23145001 RAL-371_125b 1162 chr2R 23186043 23186113 chr2R 23186238 23186308 7 195 2.0 2.0 2.0 2.3 265 chr2R 23186043 intron CG34371 - chr2R 23186176 intron CG34371 - chr2R 23186308 intron CG34371 - chr2R_7_23185001 chr2R_23185001 RAL-371_125b 1163 chr2R 23188515 23188572 chr2R 23188643 23188700 7 128 3.5 3.5 3.5 1.6 185 chr2R 23188515 intron CG34371 - chr2R 23188608 intron CG34371 - chr2R 23188700 intron CG34371 - chr2R_7_23185001 chr2R_23185001 RAL-371_125b 1164 chr2R 23189980 23189994 chr2R 23190110 23190124 4 130 7.0 0.5 3.8 0.8 144 chr2R 23189980 intron CG34371 - chr2R 23190052 intron CG34371 - chr2R 23190124 intron CG34371 - chr2R_4_23190001 chr2R_23190001 RAL-371_125b 1165 chr2R 23231924 23231991 chr2R 23232095 23232158 5 169 1.5 4.0 2.8 1.3 234 chr2R 23231924 intergenic not near genes chr2R 23232041 intergenic not near genes chr2R 23232158 intergenic CG3092 + chr2R_5_23230001 chr2R_23230001 RAL-371_125b 1166 chr2R 23236832 23236852 chr2R 23236975 23236996 6 142 2.5 6.5 4.5 1.1 164 chr2R 23236832 intergenic not near genes chr2R 23236914 intergenic not near genes chr2R 23236996 intergenic not near genes chr2R_6_23235001 chr2R_23235001 RAL-371_125b 1167 chr2R 23257516 23257525 chr2R 23257643 23257645 5 129 0.0 7.5 3.8 1.0 129 chr2R 23257516 intergenic not near genes chr2R 23257580 intergenic not near genes chr2R 23257645 intergenic not near genes chr2R_5_23255001 chr2R_23255001 RAL-371_125b 1168 chr2R 23291280 23291309 chr2R 23291408 23291437 7 128 4.5 0.0 2.2 2.2 157 chr2R 23291280 3` UTR CR44783 - chr2R 23291358 3` UTR CR44783 - chr2R 23291437 intergenic CR44783 - chr2R_7_23290001 chr2R_23290001 RAL-371_125b 1169 chr2R 23356240 23356302 chr2R 23356373 23356393 17 133 5.5 4.0 4.8 2.9 153 chr2R 23356240 3` UTR Rpi + chr2R 23356316 3` UTR Rpi + chr2R 23356393 3` UTR,3` UTR Rpi +,CG3500 - chr2R_17_23355001 chr2R_23355001 RAL-371_125b 1170 chr2R 23402572 23402635 chr2R 23407698 23407761 flea 10 5126 2.5 3.5 3.0 2.5 5189 chr2R 23402572 intergenic CG3520 - chr2R 23405166 intergenic not near genes chr2R 23407761 intergenic not near genes chr2R_10_23405001 chr2R_23405001 RAL-371_125b 1171 chr2R 23464086 23464122 chr2R 23464217 23464253 6 131 6.0 4.0 5.0 1.0 167 chr2R 23464086 intron CG43795 + chr2R 23464170 intron CG43795 + chr2R 23464253 intron CG43795 + chr2R_6_23460001 chr2R_23460001 RAL-371_125b 1172 chr2R 23485358 23485393 chr2R 23485488 23485498 8 124 5.5 5.5 5.5 1.2 140 chr2R 23485358 exon CG43795 + chr2R 23485428 intron CG43795 + chr2R 23485498 intron CG43795 + chr2R_8_23485001 chr2R_23485001 RAL-371_125b 1173 chr2R 23492964 23493038 chr2R 23493096 23493160 9 130 2.0 5.0 3.5 2.0 196 chr2R 23492964 intergenic not near genes chr2R 23493062 intergenic not near genes chr2R 23493160 intergenic not near genes chr2R_9_23490001 chr2R_23490001 RAL-371_125b 1174 chr2R 23508876 23508941 chr2R 23509043 23509108 9 167 4.0 2.5 3.2 2.1 232 chr2R 23508876 intergenic not near genes chr2R 23508992 intergenic not near genes chr2R 23509108 intergenic not near genes chr2R_9_23505001 chr2R_23505001 RAL-371_125b 1175 chr2R 23518167 23518201 chr2R 23518295 23518328 14 128 3.5 3.0 3.2 3.3 161 chr2R 23518167 intergenic not near genes chr2R 23518248 intergenic not near genes chr2R 23518328 intergenic not near genes chr2R_14_23515001 chr2R_23515001 RAL-371_125b 1176 chr2R 23529563 23529598 chr2R 23537148 23537155 412 8 7598 3.5 2.5 3.0 2.0 7592 chr2R 23529563 intron bw - chr2R 23533359 intron bw - chr2R 23537155 exon bw - chr2R_8_23530001 chr2R_23530001 RAL-371_125b 1177 chr2R 23563855 23563921 chr2R 23563985 23564051 22 130 2.5 9.0 5.8 3.2 196 chr2R 23563855 3` UTR Pi3K59F + chr2R 23563953 3` UTR Pi3K59F + chr2R 23564051 5` UTR CG30184 + chr2R_22_23560001 chr2R_23560001 RAL-371_125b 1178 chr2R 23606994 23607191 chr2R 23607124 23607334 20 134 0.5 0.5 0.5 13.3 340 chr2R 23606994 intron CG17664 - chr2R 23607164 intron CG17664 - chr2R 23607334 intron CG17664 - chr2R_20_23605001 chr2R_23605001 RAL-371_125b 1179 chr2R 23633693 23633735 chr2R 23633962 23634023 7 285 3.0 3.0 3.0 1.8 330 chr2R 23633693 intron retn + chr2R 23633858 intron retn + chr2R 23634023 intron retn + chr2R_7_23630001 chr2R_23630001 RAL-371_125b 1180 chr2R 23674145 23674192 chr2R 23674275 23674322 13 130 4.0 5.0 4.5 2.4 177 chr2R 23674145 intron Pde8 + chr2R 23674234 intron Pde8 + chr2R 23674322 exon Pde8 + chr2R_13_23670001 chr2R_23670001 RAL-371_125b 1181 chr2R 23713458 23713507 chr2R 23713648 23713697 13 190 7.0 3.0 5.0 2.2 239 chr2R 23713458 intergenic Sesn + chr2R 23713578 intergenic Sesn + chr2R 23713697 intergenic Sesn + chr2R_13_23710001 chr2R_23710001 RAL-371_125b 1182 chr2R 23724067 23724134 chr2R 23724427 23724489 5 359 1.5 3.0 2.2 1.6 422 chr2R 23724067 intron Sesn + chr2R 23724278 intron Sesn + chr2R 23724489 intron Sesn + chr2R_5_23720001 chr2R_23720001 RAL-371_125b 1183 chr2R 23771227 23771309 chr2R 23771358 23771441 4 130 0.0 0.0 0.0 4.0 214 chr2R 23771227 intron CG9850 - chr2R 23771334 intron CG9850 - chr2R 23771441 intron CG9850 - chr2R_4_23770001 chr2R_23770001 RAL-371_125b 1184 chr2R 23776118 23776146 chr2R 23776244 23776272 5 126 5.5 6.0 5.8 0.7 154 chr2R 23776118 intron CG9850 - chr2R 23776195 intron CG9850 - chr2R 23776272 intron CG9850 - chr2R_5_23775001 chr2R_23775001 RAL-371_125b 1185 chr2R 23776152 23776169 chr2R 23776233 23776289 5 116 4.0 4.5 4.2 1.0 137 chr2R 23776152 intron CG9850 - chr2R 23776220 intron CG9850 - chr2R 23776289 intron CG9850 - chr2R_5_23775001 chr2R_23775001 RAL-371_125b 1186 chr2R 23784437 23784493 chr2R 23784565 23784611 10 125 2.5 3.5 3.0 2.5 174 chr2R 23784437 intron CG9850 - chr2R 23784524 intron CG9850 - chr2R 23784611 intron CG9850 - chr2R_10_23780001 chr2R_23780001 RAL-371_125b 1187 chr2R 23802236 23802312 chr2R 23802389 23802445 11 148 2.0 7.0 4.5 2.0 209 chr2R 23802236 exon CG30177 + chr2R 23802340 3` UTR CG30177 + chr2R 23802445 3` UTR CG30177 + chr2R_11_23800001 chr2R_23800001 RAL-371_125b 1188 chr2R 23914260 23914326 chr2R 23921934 23921993 412 17 7673 2.5 4.5 3.5 3.8 7733 chr2R 23914260 exon kcc + chr2R 23918126 intron kcc + chr2R 23921993 exon kcc + chr2R_17_23915001 chr2R_23915001 RAL-371_125b 1189 chr2R 24087148 24087217 chr2R 24087315 24087389 20 171 5.0 4.5 4.8 3.4 241 chr2R 24087148 intron snama + chr2R 24087268 intron snama + chr2R 24087389 intron snama + chr2R_20_24085001 chr2R_24085001 RAL-371_125b 1190 chr2R 24147028 24147098 chr2R 24154650 24154686 412 8 7619 4.0 4.0 4.0 1.6 7658 chr2R 24147028 intron Dat + chr2R 24150857 intron Dat + chr2R 24154686 intron Dat + chr2R_8_24150001 chr2R_24150001 RAL-371_125b 1191 chr2R 24177209 24177263 chr2R 24184744 24184798 412 15 7535 4.5 4.5 4.5 2.7 7589 chr2R 24177209 3` UTR Nop60B + chr2R 24181004 intron Nop60B + chr2R 24184798 intron Nop60B + chr2R_15_24180001 chr2R_24180001 RAL-371_125b 1192 chr2R 24228355 24228430 chr2R 24228480 24228483 7 101 2.5 4.0 3.2 1.7 128 chr2R 24228355 intron CG30419 - chr2R 24228419 intron CG30419 - chr2R 24228483 intron CG30419 - chr2R_7_24225001 chr2R_24225001 RAL-371_125b 1193 chr2R 24272777 24272806 chr2R 24272905 24272914 roo 7 123 6.5 8.5 7.5 0.8 137 chr2R 24272777 intergenic not near genes chr2R 24272846 intergenic not near genes chr2R 24272914 intergenic not near genes chr2R_7_24270001 chr2R_24270001 RAL-371_125b 1194 chr2R 24339157 24339188 chr2R 24339283 24339297 6 116 2.5 9.0 5.8 0.9 140 chr2R 24339157 intergenic not near genes chr2R 24339227 intergenic not near genes chr2R 24339297 intergenic not near genes chr2R_6_24335001 chr2R_24335001 RAL-371_125b 1195 chr2R 24415283 24415342 chr2R 24415418 24415477 10 135 2.5 4.5 3.5 2.2 194 chr2R 24415283 3` UTR,3` UTR CG45068 +,CG45069 + chr2R 24415380 intergenic prom -,CG45068 +,CG45069 + chr2R 24415477 3` UTR prom - chr2R_10_24415001 chr2R_24415001 RAL-371_125b 1196 chr2R 24430920 24430942 chr2R 24431058 24431080 6 138 0.0 8.5 4.2 1.2 160 chr2R 24430920 intergenic CG15873 -,Pgam5-2 - chr2R 24431000 intergenic CG15873 -,Pgam5-2 - chr2R 24431080 intergenic Pgam5-2 -,CG15873 - chr2R_6_24430001 chr2R_24430001 RAL-371_125b 1197 chr2R 24491244 24491289 chr2R 24491420 24491475 10 189 2.5 2.5 2.5 2.9 231 chr2R 24491244 intergenic not near genes chr2R 24491360 intergenic not near genes chr2R 24491475 intergenic not near genes chr2R_10_24490001 chr2R_24490001 RAL-371_125b 1198 chr2R 24493043 24493083 chr2R 24493182 24493222 8 137 2.5 5.5 4.0 1.6 179 chr2R 24493043 intergenic CG13589 -,CG13590 - chr2R 24493132 intergenic CG13590 -,CG13589 - chr2R 24493222 intergenic CG13590 -,CG13589 - chr2R_8_24490001 chr2R_24490001 RAL-371_125b 1199 chr2R 24647526 24647608 chr2R 24655147 24655215 412 10 7615 0.0 5.0 2.5 2.9 7689 chr2R 24647526 intergenic not near genes chr2R 24651370 intergenic not near genes chr2R 24655215 intergenic not near genes chr2R_10_24650001 chr2R_24650001 RAL-371_125b 1200 chr2R 24727848 24727907 chr2R 24735395 24735465 mdg1 11 7552 4.5 5.5 5.0 1.8 7617 chr2R 24727848 intron Mid1 - chr2R 24731656 intron Mid1 - chr2R 24735465 intron Mid1 - chr2R_11_24730001 chr2R_24730001 RAL-371_125b 1201 chr2R 24763581 24763641 chr2R 24765591 24765651 G2 9 2012 2.5 6.5 4.5 1.6 2070 chr2R 24763581 exon CG3894 + chr2R 24764616 intron CG3894 + chr2R 24765651 exon CG3894 + chr2R_9_24760001 chr2R_24760001 RAL-371_125b 1202 chr2R 24813367 24813443 chr2R 24813515 24813591 19 148 2.0 1.0 1.5 7.6 224 chr2R 24813367 intergenic not near genes chr2R 24813479 intergenic not near genes chr2R 24813591 intergenic not near genes chr2R_19_24810001 chr2R_24810001 RAL-371_125b 1203 chr2R 24850556 24850607 chr2R 24850766 24850803 11 210 9.5 5.5 7.5 1.3 247 chr2R 24850556 intergenic CG3650 + chr2R 24850680 intergenic CG3650 + chr2R 24850803 intergenic not near genes chr2R_11_24850001 chr2R_24850001 RAL-371_125b 1204 chr2R 24859813 24859866 chr2R 24859943 24860002 9 130 4.0 0.5 2.2 2.8 189 chr2R 24859813 5` UTR CR44829 + chr2R 24859908 5` UTR CR44829 + chr2R 24860002 5` UTR CR44829 + chr2R_9_24855001 chr2R_24855001 RAL-371_125b 1205 chr2R 24884003 24884075 chr2R 24884135 24884207 19 132 2.5 4.0 3.2 4.5 204 chr2R 24884003 intron NKAIN + chr2R 24884105 intron NKAIN + chr2R 24884207 intron NKAIN + chr2R_19_24880001 chr2R_24880001 RAL-371_125b 1206 chr2R 25004847 25004914 chr2R 25004975 25005042 13 128 4.0 3.5 3.8 2.7 195 chr2R 25004847 intron zip - chr2R 25004944 intron zip - chr2R 25005042 intron zip - chr2R_13_25000001 chr2R_25000001 RAL-371_125b 1207 chr2R 25014500 25014567 chr2R 25014624 25014677 6 110 2.5 2.5 2.5 1.7 177 chr2R 25014500 intron uzip + chr2R 25014588 intron uzip + chr2R 25014677 intron uzip + chr2R_6_25010001 chr2R_25010001 RAL-371_125b 1208 chr2R 25018305 25018365 chr2R 25018456 25018516 12 149 3.5 8.0 5.8 1.8 211 chr2R 25018305 intron uzip + chr2R 25018410 intron uzip + chr2R 25018516 intron uzip + chr2R_12_25015001 chr2R_25015001 RAL-371_125b 1209 chr2R 25022595 25022661 chr2R 25022729 25022795 13 134 5.5 0.0 2.8 3.4 200 chr2R 25022595 intron uzip + chr2R 25022695 intron uzip + chr2R 25022795 intron uzip + chr2R_13_25020001 chr2R_25020001 RAL-371_125b 1210 chr2R 25101235 25101294 chr2R 25101387 25101441 11 150 3.0 4.5 3.8 2.3 206 chr2R 25101235 intron lov - chr2R 25101338 intron lov - chr2R 25101441 intron lov - chr2R_11_25100001 chr2R_25100001 RAL-371_125b 1211 chr2R 25122918 25122991 chr2R 25123047 25123119 11 129 1.5 2.0 1.8 3.9 201 chr2R 25122918 intron lov - chr2R 25123018 intron lov - chr2R 25123119 intron lov - chr2R_11_25120001 chr2R_25120001 RAL-371_125b 1212 chr2R 25141611 25141677 chr2R 25159351 25159417 roo 13 17739 3.5 5.5 4.5 2.4 17806 chr2R 25141611 intergenic not near genes chr2R 25150514 intergenic not near genes chr2R 25159417 intergenic not near genes chr2R_13_25150001 chr2R_25150001 RAL-371_125b 1213 chr2R 25180713 25180793 chr2R 25180842 25180920 8 127 2.5 1.5 2.0 2.7 207 chr2R 25180713 intergenic not near genes chr2R 25180816 intergenic not near genes chr2R 25180920 intergenic not near genes chr2R_8_25180001 chr2R_25180001 RAL-371_125b 1214 chr2R 25181066 25181125 chr2R 25181213 25181272 8 147 3.0 7.5 5.2 1.3 206 chr2R 25181066 intergenic not near genes chr2R 25181169 intergenic not near genes chr2R 25181272 intergenic not near genes chr2R_8_25180001 chr2R_25180001 RAL-371_125b 1215 chr2R 25191680 25191719 chr2R 25191808 25191847 5 128 3.0 3.0 3.0 1.2 167 chr2R 25191680 intron CG9380 - chr2R 25191764 intron CG9380 - chr2R 25191847 intron CG9380 - chr2R_5_25190001 chr2R_25190001 RAL-371_125b 1216 chr2R 25193294 25193364 chr2R 25193486 25193558 9 192 2.0 2.5 2.2 2.8 264 chr2R 25193294 intron CG9380 - chr2R 25193426 intron CG9380 - chr2R 25193558 intron CG9380 - chr2R_9_25190001 chr2R_25190001 RAL-371_125b 1217 chr2R 25235977 25236043 chr2R 25236139 25236204 8 161 1.0 3.0 2.0 2.7 227 chr2R 25235977 intron CG9380 - chr2R 25236090 intron CG9380 - chr2R 25236204 intron CG9380 - chr2R_8_25235001 chr2R_25235001 RAL-371_125b 1218 chr3L 30850 30866 chr3L 31029 31045 4 179 5.5 7.0 6.2 0.6 195 chr3L 30850 intergenic not near genes chr3L 30948 intergenic not near genes chr3L 31045 intergenic not near genes chr3L_4_30001 chr3L_30001 RAL-371_125b 1219 chr3L 36377 36453 chr3L 36713 36787 5 335 1.5 4.0 2.8 1.3 410 chr3L 36377 intergenic not near genes chr3L 36582 intergenic not near genes chr3L 36787 intergenic not near genes chr3L_5_35001 chr3L_35001 RAL-371_125b 1220 chr3L 41391 41462 chr3L 41611 41682 11 216 3.5 3.5 3.5 2.4 291 chr3L 41391 intergenic not near genes chr3L 41536 intergenic not near genes chr3L 41682 intergenic not near genes chr3L_11_40001 chr3L_40001 RAL-371_125b 1221 chr3L 68941 69006 chr3L 69078 69143 10 136 1.5 5.5 3.5 2.2 202 chr3L 68941 3` UTR Lsp1gamma + chr3L 69042 intergenic Lsp1gamma +,CR44510 + chr3L 69143 5` UTR CR44510 + chr3L_10_65001 chr3L_65001 RAL-371_125b 1222 chr3L 71888 71948 chr3L 72021 72081 10 132 5.5 2.5 4.0 2.0 193 chr3L 71888 intergenic CR43988 -,CG43150 + chr3L 71984 intergenic CR43988 - chr3L 72081 intergenic CR43988 - chr3L_10_70001 chr3L_70001 RAL-371_125b 1223 chr3L 110172 110238 chr3L 119389 119455 roo 11 9217 2.0 2.5 2.2 3.4 9283 chr3L 110172 intergenic not near genes chr3L 114814 intergenic not near genes chr3L 119455 intergenic not near genes chr3L_11_110001 chr3L_110001 RAL-371_125b 1224 chr3L 402656 402715 chr3L 409758 409818 297 12 7096 4.0 6.0 5.0 2.0 7162 chr3L 402656 intergenic not near genes chr3L 406237 intergenic not near genes chr3L 409818 intergenic not near genes chr3L_12_405001 chr3L_405001 RAL-371_125b 1225 chr3L 428156 428210 chr3L 428327 428347 4 154 4.0 0.5 2.2 1.2 191 chr3L 428156 intergenic not near genes chr3L 428252 intergenic not near genes chr3L 428347 intergenic not near genes chr3L_4_425001 chr3L_425001 RAL-371_125b 1226 chr3L 470874 470914 chr3L 471151 471191 9 273 3.5 6.5 5.0 1.5 317 chr3L 470874 intron klar - chr3L 471032 intron klar - chr3L 471191 intron klar - chr3L_9_470001 chr3L_470001 RAL-371_125b 1227 chr3L 470916 470942 chr3L 471149 471219 4 266 2.0 5.5 3.8 0.8 303 chr3L 470916 intron klar - chr3L 471068 intron klar - chr3L 471219 intron klar - chr3L_4_470001 chr3L_470001 RAL-371_125b 1228 chr3L 561442 561460 chr3L 561569 561587 6 127 5.0 0.5 2.8 1.6 145 chr3L 561442 intron hipk + chr3L 561514 intron hipk + chr3L 561587 intron hipk + chr3L_6_560001 chr3L_560001 RAL-371_125b 1229 chr3L 592917 592962 chr3L 593043 593088 6 126 3.0 4.5 3.8 1.2 171 chr3L 592917 intergenic MED14 + chr3L 593002 intergenic MED14 + chr3L 593088 intergenic MED14 + chr3L_6_590001 chr3L_590001 RAL-371_125b 1230 chr3L 606849 606892 chr3L 606975 607021 8 129 6.0 0.0 3.0 2.0 172 chr3L 606849 intergenic Reg-2 - chr3L 606935 intergenic Reg-2 - chr3L 607021 intergenic Reg-2 - chr3L_8_605001 chr3L_605001 RAL-371_125b 1231 chr3L 709520 709569 chr3L 709658 709707 10 137 2.5 0.0 1.2 4.5 187 chr3L 709520 intron CkIIalpha-i3 - chr3L 709614 intron CkIIalpha-i3 - chr3L 709707 intron CkIIalpha-i3 - chr3L_10_705001 chr3L_705001 RAL-371_125b 1232 chr3L 759778 759803 chr3L 760008 760028 6 226 8.0 3.5 5.8 0.9 250 chr3L 759778 intergenic not near genes chr3L 759903 intergenic not near genes chr3L 760028 intergenic not near genes chr3L_6_755001 chr3L_755001 RAL-371_125b 1233 chr3L 789874 789931 chr3L 790409 790466 roo 9 535 4.0 5.0 4.5 1.6 592 chr3L 789874 intergenic not near genes chr3L 790170 intergenic not near genes chr3L 790466 intergenic not near genes chr3L_9_790001 chr3L_790001 RAL-371_125b 1234 chr3L 857961 857991 chr3L 866492 866516 Tirant 7 8527 6.0 3.5 4.8 1.2 8555 chr3L 857961 intergenic not near genes chr3L 862238 intergenic not near genes chr3L 866516 5` UTR CG12502 + chr3L_7_860001 chr3L_860001 RAL-371_125b 1235 chr3L 858002 858029 chr3L 866491 866506 Tirant 5 8511 3.0 3.5 3.2 1.2 8504 chr3L 858002 intergenic not near genes chr3L 862254 intergenic not near genes chr3L 866506 5` UTR CG12502 + chr3L_5_860001 chr3L_860001 RAL-371_125b 1236 chr3L 875615 875685 chr3L 875752 875820 17 135 3.0 4.5 3.8 3.5 205 chr3L 875615 intron CG32479 + chr3L 875718 intron CG32479 + chr3L 875820 intron CG32479 + chr3L_17_875001 chr3L_875001 RAL-371_125b 1237 chr3L 922127 922184 chr3L 922254 922316 8 124 3.5 4.5 4.0 1.6 189 chr3L 922127 intron Glut1 + chr3L 922222 intron Glut1 + chr3L 922316 intron Glut1 + chr3L_8_920001 chr3L_920001 RAL-371_125b 1238 chr3L 925134 925194 chr3L 932610 932670 mdg1 16 7476 3.5 2.0 2.8 4.2 7536 chr3L 925134 intron Glut1 + chr3L 928902 intron Glut1 + chr3L 932670 intron Glut1 + chr3L_16_925001 chr3L_925001 RAL-371_125b 1239 chr3L 933825 933862 chr3L 934008 934045 7 183 5.0 3.5 4.2 1.3 220 chr3L 933825 intron Glut1 + chr3L 933935 intron Glut1 + chr3L 934045 intron Glut1 + chr3L_7_930001 chr3L_930001 RAL-371_125b 1240 chr3L 939744 939788 chr3L 940915 940959 jockey 11 1170 4.0 7.5 5.8 1.6 1215 chr3L 939744 intron Glut1 + chr3L 940352 intron Glut1 + chr3L 940959 intron Glut1 + chr3L_11_940001 chr3L_940001 RAL-371_125b 1241 chr3L 1003008 1003069 chr3L 1003130 1003196 17 126 6.0 7.0 6.5 2.3 188 chr3L 1003008 intron trio - chr3L 1003102 intron trio - chr3L 1003196 intron trio - chr3L_17_1000001 chr3L_1000001 RAL-371_125b 1242 chr3L 1010956 1010990 chr3L 1011087 1011096 10 126 3.5 6.5 5.0 1.7 140 chr3L 1010956 intron trio - chr3L 1011026 intron trio - chr3L 1011096 intron trio - chr3L_10_1010001 chr3L_1010001 RAL-371_125b 1243 chr3L 1010994 1011165 chr3L 1011084 1011292 5 105 9.5 6.0 7.8 0.6 298 chr3L 1010994 intron trio - chr3L 1011143 intron trio - chr3L 1011292 intron trio - chr3L_5_1010001 chr3L_1010001 RAL-371_125b 1244 chr3L 1014980 1015044 chr3L 1015142 1015189 15 157 4.5 6.5 5.5 2.3 209 chr3L 1014980 intron trio - chr3L 1015084 intron trio - chr3L 1015189 intron trio - chr3L_15_1015001 chr3L_1015001 RAL-371_125b 1245 chr3L 1031553 1031594 chr3L 1031661 1031710 8 117 7.5 4.0 5.8 1.2 157 chr3L 1031553 intron trio - chr3L 1031632 intron trio - chr3L 1031710 intron trio - chr3L_8_1030001 chr3L_1030001 RAL-371_125b 1246 chr3L 1047307 1047385 chr3L 1055169 1055195 412 6 7834 3.0 4.0 3.5 1.3 7888 chr3L 1047307 intron bab1 - chr3L 1051251 intron bab1 - chr3L 1055195 intron bab1 - chr3L_6_1050001 chr3L_1050001 RAL-371_125b 1247 chr3L 1058722 1058796 chr3L 1058851 1058906 10 122 1.5 2.0 1.8 3.6 184 chr3L 1058722 intron bab1 - chr3L 1058814 intron bab1 - chr3L 1058906 intron bab1 - chr3L_10_1055001 chr3L_1055001 RAL-371_125b 1248 chr3L 1109592 1109657 chr3L 1109725 1109795 7 136 0.0 7.0 3.5 1.6 203 chr3L 1109592 intergenic not near genes chr3L 1109694 intergenic not near genes chr3L 1109795 intergenic not near genes chr3L_7_1105001 chr3L_1105001 RAL-371_125b 1249 chr3L 1154091 1154156 chr3L 1163291 1163356 roo 6 9196 3.5 5.0 4.2 1.2 9265 chr3L 1154091 intron bab2 - chr3L 1158724 intron bab2 - chr3L 1163356 intron bab2 - chr3L_6_1155001 chr3L_1155001 RAL-371_125b 1250 chr3L 1219563 1219611 chr3L 1227328 1227388 412 9 7780 7.5 3.0 5.2 1.5 7825 chr3L 1219563 intron mwh + chr3L 1223476 intron mwh + chr3L 1227388 intron mwh + chr3L_9_1220001 chr3L_1220001 RAL-371_125b 1251 chr3L 1260115 1260151 chr3L 1260245 1260281 8 130 2.5 6.0 4.2 1.5 166 chr3L 1260115 intron CG9134 + chr3L 1260198 intron CG9134 + chr3L 1260281 intron CG9134 + chr3L_8_1260001 chr3L_1260001 RAL-371_125b 1252 chr3L 1265496 1265499 chr3L 1265623 1265626 4 127 5.0 3.5 4.2 0.8 130 chr3L 1265496 intron CG9134 + chr3L 1265561 intron CG9134 + chr3L 1265626 intron CG9134 + chr3L_4_1265001 chr3L_1265001 RAL-371_125b 1253 chr3L 1310992 1311037 chr3L 1315802 1315871 17 4820 30.0 30.5 30.2 0.5 4879 chr3L 1310992 exon CG2469 + chr3L 1313432 intergenic CG9186 -,CG9153 + chr3L 1315871 exon CG9153 + chr3L_17_1310001 chr3L_1310001 RAL-371_125b 1254 chr3L 1324576 1324641 chr3L 1324704 1324769 15 128 5.0 3.5 4.2 2.9 193 chr3L 1324576 intron Myo61F + chr3L 1324672 intron Myo61F + chr3L 1324769 intron Myo61F + chr3L_15_1320001 chr3L_1320001 RAL-371_125b 1255 chr3L 1356992 1357000 chr3L 1357112 1357127 4 125 6.0 9.5 7.8 0.5 135 chr3L 1356992 intron Ptp61F - chr3L 1357060 intron Ptp61F - chr3L 1357127 intron Ptp61F - chr3L_4_1355001 chr3L_1355001 RAL-371_125b 1256 chr3L 1363984 1364052 chr3L 1364120 1364188 9 132 2.0 4.5 3.2 2.1 204 chr3L 1363984 intron Ptp61F - chr3L 1364086 intron Ptp61F - chr3L 1364188 intron Ptp61F - chr3L_9_1360001 chr3L_1360001 RAL-371_125b 1257 chr3L 1396699 1396759 chr3L 1396832 1396893 10 134 2.5 3.5 3.0 2.5 194 chr3L 1396699 intron Ptp61F - chr3L 1396796 intron Ptp61F - chr3L 1396893 intron Ptp61F - chr3L_10_1395001 chr3L_1395001 RAL-371_125b 1258 chr3L 1415728 1415761 chr3L 1415860 1415892 7 129 6.5 1.0 3.8 1.5 164 chr3L 1415728 intron Ptp61F - chr3L 1415810 intron Ptp61F - chr3L 1415892 intron Ptp61F - chr3L_7_1415001 chr3L_1415001 RAL-371_125b 1259 chr3L 1415762 1415800 chr3L 1415857 1415932 4 120 3.5 1.0 2.2 1.2 170 chr3L 1415762 intron Ptp61F - chr3L 1415847 intron Ptp61F - chr3L 1415932 intron Ptp61F - chr3L_4_1415001 chr3L_1415001 RAL-371_125b 1260 chr3L 1480950 1481023 chr3L 1481080 1481153 14 123 5.5 8.5 7.0 1.8 203 chr3L 1480950 intron stet - chr3L 1481052 intron stet - chr3L 1481153 intron stet - chr3L_14_1480001 chr3L_1480001 RAL-371_125b 1261 chr3L 1485688 1485732 chr3L 1486909 1486953 1360 9 1218 6.5 4.5 5.5 1.4 1265 chr3L 1485688 intron stet - chr3L 1486320 intron stet - chr3L 1486953 intron stet - chr3L_9_1485001 chr3L_1485001 RAL-371_125b 1262 chr3L 1505959 1506027 chr3L 1513606 1513640 17.6 13 7643 6.0 3.0 4.5 2.4 7681 chr3L 1505959 intron,intron Psa +,cue - chr3L 1509800 intron,intron Psa +,cue - chr3L 1513640 intron,intron Psa +,cue - chr3L_13_1505001 chr3L_1505001 RAL-371_125b 1263 chr3L 1571192 1571256 chr3L 1571323 1571382 7 126 4.5 2.0 3.2 1.7 190 chr3L 1571192 intron CG12004 + chr3L 1571287 intron CG12004 + chr3L 1571382 intron CG12004 + chr3L_7_1570001 chr3L_1570001 RAL-371_125b 1264 chr3L 1571428 1571493 chr3L 1571563 1571629 11 136 3.0 2.5 2.8 2.9 201 chr3L 1571428 intron CG12004 + chr3L 1571528 intron CG12004 + chr3L 1571629 intron CG12004 + chr3L_11_1570001 chr3L_1570001 RAL-371_125b 1265 chr3L 1577535 1577589 chr3L 1577690 1577711 5 157 1.0 0.5 0.8 2.8 176 chr3L 1577535 intron CG13917 + chr3L 1577623 intron CG13917 + chr3L 1577711 intron CG13917 + chr3L_5_1575001 chr3L_1575001 RAL-371_125b 1266 chr3L 1585899 1585933 chr3L 1586032 1586066 5 133 0.0 0.0 0.0 5.0 167 chr3L 1585899 intron CG13917 + chr3L 1585982 intron CG13917 + chr3L 1586066 intron CG13917 + chr3L_5_1585001 chr3L_1585001 RAL-371_125b 1267 chr3L 1661545 1661601 chr3L 1661658 1661684 7 119 3.5 2.0 2.8 1.8 139 chr3L 1661545 exon CG7971 - chr3L 1661614 intron CG7971 - chr3L 1661684 intron CG7971 - chr3L_7_1660001 chr3L_1660001 RAL-371_125b 1268 chr3L 1683995 1684037 chr3L 1684118 1684160 7 119 8.0 5.5 6.8 0.9 165 chr3L 1683995 intron CG7991 + chr3L 1684078 intron CG7991 + chr3L 1684160 intron CG7991 + chr3L_7_1680001 chr3L_1680001 RAL-371_125b 1269 chr3L 1728480 1728543 chr3L 1728615 1728678 12 131 3.5 6.0 4.8 2.1 198 chr3L 1728480 intron drpr - chr3L 1728579 intron drpr - chr3L 1728678 intron drpr - chr3L_12_1725001 chr3L_1725001 RAL-371_125b 1270 chr3L 1740809 1740878 chr3L 1741104 1741173 pogo 13 289 4.0 5.5 4.8 2.2 364 chr3L 1740809 intron Gk + chr3L 1740991 intron Gk + chr3L 1741173 intron Gk + chr3L_13_1740001 chr3L_1740001 RAL-371_125b 1271 chr3L 1809954 1810001 chr3L 1810195 1810242 14 240 3.0 4.0 3.5 3.1 288 chr3L 1809954 intergenic not near genes chr3L 1810098 intergenic GV1 + chr3L 1810242 intergenic GV1 + chr3L_14_1810001 chr3L_1810001 RAL-371_125b 1272 chr3L 1821595 1821647 chr3L 1821727 1821779 9 132 4.0 4.0 4.0 1.8 184 chr3L 1821595 intron GV1 + chr3L 1821687 intron GV1 + chr3L 1821779 intron GV1 + chr3L_9_1820001 chr3L_1820001 RAL-371_125b 1273 chr3L 1922414 1922443 chr3L 1922538 1922563 5 126 4.0 7.0 5.5 0.8 149 chr3L 1922414 intron Dbx + chr3L 1922488 intron Dbx + chr3L 1922563 intron Dbx + chr3L_5_1920001 chr3L_1920001 RAL-371_125b 1274 chr3L 1924924 1924966 chr3L 1925112 1925154 6 187 2.0 5.0 3.5 1.3 230 chr3L 1924924 exon Dbx + chr3L 1925039 intron Dbx + chr3L 1925154 intron Dbx + chr3L_6_1925001 chr3L_1925001 RAL-371_125b 1275 chr3L 1988816 1988868 chr3L 1989045 1989081 12 227 0.5 3.5 2.0 4.0 265 chr3L 1988816 intergenic not near genes chr3L 1988948 intergenic not near genes chr3L 1989081 intergenic not near genes chr3L_12_1985001 chr3L_1985001 RAL-371_125b 1276 chr3L 1991070 1991127 chr3L 1991199 1991255 10 129 3.0 1.0 2.0 3.3 185 chr3L 1991070 intergenic not near genes chr3L 1991162 intergenic not near genes chr3L 1991255 intergenic not near genes chr3L_10_1990001 chr3L_1990001 RAL-371_125b 1277 chr3L 2108208 2108273 chr3L 2113462 2113527 copia 7 5254 2.5 3.0 2.8 1.8 5319 chr3L 2108208 intron sls - chr3L 2110868 intron sls - chr3L 2113527 intron sls - chr3L_7_2110001 chr3L_2110001 RAL-371_125b 1278 chr3L 2168732 2168795 chr3L 2168873 2168936 20 141 2.5 4.0 3.2 4.8 204 chr3L 2168732 exon CG15879 - chr3L 2168834 intron CG15879 - chr3L 2168936 intron CG15879 - chr3L_20_2165001 chr3L_2165001 RAL-371_125b 1279 chr3L 2199782 2199821 chr3L 2199908 2199947 11 126 1.5 8.0 4.8 1.9 165 chr3L 2199782 intergenic not near genes chr3L 2199864 intergenic not near genes chr3L 2199947 intergenic not near genes chr3L_11_2195001 chr3L_2195001 RAL-371_125b 1280 chr3L 2206453 2206524 chr3L 2206681 2206752 11 227 3.0 2.5 2.8 2.9 299 chr3L 2206453 intergenic not near genes chr3L 2206602 intergenic not near genes chr3L 2206752 intergenic not near genes chr3L_11_2205001 chr3L_2205001 RAL-371_125b 1281 chr3L 2277941 2278005 chr3L 2278187 2278251 9 242 0.5 4.5 2.5 2.6 310 chr3L 2277941 3` UTR yellow-g2 + chr3L 2278096 intergenic yellow-g2 + chr3L 2278251 intergenic yellow-g2 + chr3L_9_2275001 chr3L_2275001 RAL-371_125b 1282 chr3L 2307959 2308010 chr3L 2308115 2308133 9 151 6.0 2.0 4.0 1.8 174 chr3L 2307959 intergenic not near genes chr3L 2308046 intergenic not near genes chr3L 2308133 intergenic not near genes chr3L_9_2305001 chr3L_2305001 RAL-371_125b 1283 chr3L 2351443 2351504 chr3L 2352047 2352108 7 602 3.5 2.5 3.0 1.8 665 chr3L 2351443 intergenic not near genes chr3L 2351776 intergenic not near genes chr3L 2352108 intergenic not near genes chr3L_7_2350001 chr3L_2350001 RAL-371_125b 1284 chr3L 2411300 2411314 chr3L 2411430 2411439 4 129 2.0 2.0 2.0 1.3 139 chr3L 2411300 intron CG45186 + chr3L 2411370 intron CG45186 + chr3L 2411439 intron CG45186 + chr3L_4_2410001 chr3L_2410001 RAL-371_125b 1285 chr3L 2447463 2447527 chr3L 2456669 2456733 roo 16 9205 5.0 4.5 4.8 2.8 9270 chr3L 2447463 intron CG45186 + chr3L 2452098 intron CG45186 + chr3L 2456733 intron CG45186 + chr3L_16_2450001 chr3L_2450001 RAL-371_125b 1286 chr3L 2493779 2493839 chr3L 2493907 2493977 5 136 2.0 1.5 1.8 1.8 198 chr3L 2493779 intron CG45186 + chr3L 2493878 intron CG45186 + chr3L 2493977 intron CG45186 + chr3L_5_2490001 chr3L_2490001 RAL-371_125b 1287 chr3L 2515362 2515411 chr3L 2515496 2515543 8 133 1.0 5.5 3.2 1.9 181 chr3L 2515362 intron Spn - chr3L 2515452 intron Spn - chr3L 2515543 intron Spn - chr3L_8_2515001 chr3L_2515001 RAL-371_125b 1288 chr3L 2533620 2533672 chr3L 2533741 2533765 5 116 4.5 5.5 5.0 0.8 145 chr3L 2533620 intron Spn - chr3L 2533692 intron Spn - chr3L 2533765 intron Spn - chr3L_5_2530001 chr3L_2530001 RAL-371_125b 1289 chr3L 2534486 2534622 chr3L 2534615 2534755 14 139 0.0 0.0 0.0 14.0 269 chr3L 2534486 intron Spn - chr3L 2534620 intron Spn - chr3L 2534755 exon Spn - chr3L_14_2530001 chr3L_2530001 RAL-371_125b 1290 chr3L 2561485 2561555 chr3L 2561612 2561682 15 126 5.5 3.0 4.2 2.9 197 chr3L 2561485 intron msn - chr3L 2561584 intron msn - chr3L 2561682 intron msn - chr3L_15_2560001 chr3L_2560001 RAL-371_125b 1291 chr3L 2683927 2683968 chr3L 2684053 2684097 8 128 4.5 6.5 5.5 1.2 170 chr3L 2683927 intron Fife - chr3L 2684012 intron Fife - chr3L 2684097 intron Fife - chr3L_8_2680001 chr3L_2680001 RAL-371_125b 1292 chr3L 2751432 2751457 chr3L 2755777 2755802 F-element 4 4345 1.5 7.5 4.5 0.7 4370 chr3L 2751432 intron Mrtf - chr3L 2753617 intron Mrtf - chr3L 2755802 intron Mrtf - chr3L_4_2750001 chr3L_2750001 RAL-371_125b 1293 chr3L 2783595 2783660 chr3L 2783733 2783798 12 136 4.0 3.0 3.5 2.7 203 chr3L 2783595 intron pgant6 + chr3L 2783696 intron pgant6 + chr3L 2783798 exon pgant6 + chr3L_12_2780001 chr3L_2780001 RAL-371_125b 1294 chr3L 2829364 2829442 chr3L 2829500 2829550 7 130 0.5 4.5 2.5 2.0 186 chr3L 2829364 intron CG43444 - chr3L 2829457 intron CG43444 - chr3L 2829550 intron CG43444 - chr3L_7_2825001 chr3L_2825001 RAL-371_125b 1295 chr3L 2854435 2854500 chr3L 2854562 2854628 14 125 2.0 0.5 1.2 6.4 193 chr3L 2854435 intron CG43444 - chr3L 2854532 intron CG43444 - chr3L 2854628 intron CG43444 - chr3L_14_2850001 chr3L_2850001 RAL-371_125b 1296 chr3L 2906023 2906082 chr3L 2906160 2906178 10 132 3.5 2.0 2.8 2.6 155 chr3L 2906023 intron Shab + chr3L 2906100 intron Shab + chr3L 2906178 intron Shab + chr3L_10_2905001 chr3L_2905001 RAL-371_125b 1297 chr3L 2927799 2927848 chr3L 2936126 2936169 Tirant 10 8324 4.0 3.0 3.5 2.2 8370 chr3L 2927799 intron Shab + chr3L 2931984 intron Shab + chr3L 2936169 intron Shab + chr3L_10_2930001 chr3L_2930001 RAL-371_125b 1298 chr3L 2959687 2959741 chr3L 2959906 2959960 12 219 3.5 4.0 3.8 2.5 273 chr3L 2959687 intergenic CG34025 -,Shab + chr3L 2959824 3` UTR CG34025 - chr3L 2959960 intron CG34025 - chr3L_12_2955001 chr3L_2955001 RAL-371_125b 1299 chr3L 2987658 2987700 chr3L 2987790 2987806 5 127 6.5 0.0 3.2 1.2 148 chr3L 2987658 intergenic not near genes chr3L 2987732 intergenic not near genes chr3L 2987806 intergenic not near genes chr3L_5_2985001 chr3L_2985001 RAL-371_125b 1300 chr3L 3028978 3029021 chr3L 3029131 3029174 9 152 2.0 4.0 3.0 2.2 196 chr3L 3028978 intergenic not near genes chr3L 3029076 intergenic not near genes chr3L 3029174 intergenic not near genes chr3L_9_3025001 chr3L_3025001 RAL-371_125b 1301 chr3L 3040278 3040321 chr3L 3042117 3042160 S-element 10 1839 6.0 2.0 4.0 2.0 1882 chr3L 3040278 3` UTR CG2162 + chr3L 3041219 intergenic not near genes chr3L 3042160 intergenic Jafrac2 + chr3L_10_3040001 chr3L_3040001 RAL-371_125b 1302 chr3L 3050853 3050929 chr3L 3050990 3051054 9 129 0.0 2.5 1.2 4.1 201 chr3L 3050853 intron CG32485 + chr3L 3050954 intron CG32485 + chr3L 3051054 exon CG32485 + chr3L_9_3050001 chr3L_3050001 RAL-371_125b 1303 chr3L 3051696 3051755 chr3L 3051988 3052050 pogo 5 292 5.0 0.5 2.8 1.3 354 chr3L 3051696 3` UTR CG32485 + chr3L 3051873 intergenic CG32485 + chr3L 3052050 intergenic CG32485 +,CG1271 + chr3L_5_3050001 chr3L_3050001 RAL-371_125b 1304 chr3L 3057220 3057272 chr3L 3057414 3057466 12 194 4.0 6.0 5.0 2.0 246 chr3L 3057220 exon CG32486 - chr3L 3057343 intron CG32486 - chr3L 3057466 exon CG32486 - chr3L_12_3055001 chr3L_3055001 RAL-371_125b 1305 chr3L 3061282 3061307 chr3L 3069870 3069930 Tirant 6 8610 3.5 3.0 3.2 1.4 8648 chr3L 3061282 intron CG32486 - chr3L 3065606 intron CG32486 - chr3L 3069930 intron CG32486 - chr3L_6_3065001 chr3L_3065001 RAL-371_125b 1306 chr3L 3128143 3128204 chr3L 3128279 3128340 11 136 2.5 4.0 3.2 2.6 197 chr3L 3128143 intergenic prominin-like - chr3L 3128242 intergenic not near genes chr3L 3128340 intergenic CG11537 - chr3L_11_3125001 chr3L_3125001 RAL-371_125b 1307 chr3L 3171328 3171401 chr3L 3171455 3171528 14 127 4.5 5.0 4.8 2.4 200 chr3L 3171328 exon CG32278 + chr3L 3171428 3` UTR CG32278 + chr3L 3171528 3` UTR CG32278 + chr3L_14_3170001 chr3L_3170001 RAL-371_125b 1308 chr3L 3259590 3259627 chr3L 3259725 3259746 6 136 4.0 4.5 4.2 1.2 156 chr3L 3259590 intron ckd + chr3L 3259668 intron ckd + chr3L 3259746 intron ckd + chr3L_6_3255001 chr3L_3255001 RAL-371_125b 1309 chr3L 3281402 3281468 chr3L 3281947 3282013 Doc 10 544 2.5 6.0 4.2 1.9 611 chr3L 3281402 intron CG12017 + chr3L 3281708 intron CG12017 + chr3L 3282013 intron CG12017 + chr3L_10_3280001 chr3L_3280001 RAL-371_125b 1310 chr3L 3284410 3284468 chr3L 3284532 3284546 5 118 4.5 5.5 5.0 0.8 136 chr3L 3284410 intron CG12017 + chr3L 3284478 intron CG12017 + chr3L 3284546 intron CG12017 + chr3L_5_3280001 chr3L_3280001 RAL-371_125b 1311 chr3L 3308429 3308494 chr3L 3308620 3308651 11 188 6.0 4.0 5.0 1.8 222 chr3L 3308429 intron ZnT63C + chr3L 3308540 intron ZnT63C + chr3L 3308651 intron ZnT63C + chr3L_11_3305001 chr3L_3305001 RAL-371_125b 1312 chr3L 3317533 3317558 chr3L 3317662 3317687 7 129 0.0 4.5 2.2 2.2 154 chr3L 3317533 intergenic Drsl5 +,PIG-C - chr3L 3317610 intergenic PIG-C -,Drsl5 + chr3L 3317687 intergenic PIG-C - chr3L_7_3315001 chr3L_3315001 RAL-371_125b 1313 chr3L 3436240 3436315 chr3L 3436369 3436444 14 129 1.5 2.5 2.0 4.7 204 chr3L 3436240 intron eIF5B - chr3L 3436342 intron eIF5B - chr3L 3436444 intron eIF5B - chr3L_14_3435001 chr3L_3435001 RAL-371_125b 1314 chr3L 3439163 3439192 chr3L 3439289 3439302 8 123 3.0 2.0 2.5 2.3 139 chr3L 3439163 intron eIF5B - chr3L 3439232 intron eIF5B - chr3L 3439302 intron eIF5B - chr3L_8_3435001 chr3L_3435001 RAL-371_125b 1315 chr3L 3449216 3449233 chr3L 3449344 3449361 8 128 5.0 2.5 3.8 1.7 145 chr3L 3449216 intron eIF5B - chr3L 3449288 intron eIF5B - chr3L 3449361 intron eIF5B - chr3L_8_3445001 chr3L_3445001 RAL-371_125b 1316 chr3L 3470124 3470176 chr3L 3470250 3470302 8 126 0.0 2.5 1.2 3.6 178 chr3L 3470124 intron CG14971 - chr3L 3470213 intron CG14971 - chr3L 3470302 intron CG14971 - chr3L_8_3470001 chr3L_3470001 RAL-371_125b 1317 chr3L 3484383 3484441 chr3L 3484510 3484548 14 126 4.5 5.5 5.0 2.3 165 chr3L 3484383 intron,intron CG42324 +,CG43074 - chr3L 3484466 intron,exon CG42324 +,CG43074 - chr3L 3484548 intron,intron CG42324 +,CG43074 - chr3L_14_3480001 chr3L_3480001 RAL-371_125b 1318 chr3L 3528993 3529058 chr3L 3529341 3529407 10 346 1.5 2.5 2.0 3.3 414 chr3L 3528993 intron Eip63E + chr3L 3529200 intron Eip63E + chr3L 3529407 intron Eip63E + chr3L_10_3525001 chr3L_3525001 RAL-371_125b 1319 chr3L 3565921 3565962 chr3L 3566016 3566063 10 115 4.0 3.5 3.8 2.1 142 chr3L 3565921 intron Eip63E + chr3L 3565992 intron Eip63E + chr3L 3566063 intron Eip63E + chr3L_10_3565001 chr3L_3565001 RAL-371_125b 1320 chr3L 3585547 3585627 chr3L 3585689 3585752 10 134 0.0 4.0 2.0 3.3 205 chr3L 3585547 intron Eip63E + chr3L 3585650 intron Eip63E + chr3L 3585752 intron Eip63E + chr3L_10_3585001 chr3L_3585001 RAL-371_125b 1321 chr3L 3601260 3601314 chr3L 3606621 3606675 copia 10 5360 6.0 5.5 5.8 1.5 5415 chr3L 3601260 intron Eip63E + chr3L 3603968 intron Eip63E + chr3L 3606675 intron Eip63E + chr3L_10_3600001 chr3L_3600001 RAL-371_125b 1322 chr3L 3627142 3627201 chr3L 3627276 3627334 5 133 3.5 2.5 3.0 1.2 192 chr3L 3627142 exon dar1 + chr3L 3627238 intron dar1 + chr3L 3627334 intron dar1 + chr3L_5_3625001 chr3L_3625001 RAL-371_125b 1323 chr3L 3691265 3691273 chr3L 3691413 3691421 4 148 2.5 0.0 1.2 1.8 156 chr3L 3691265 intergenic not near genes chr3L 3691343 intergenic not near genes chr3L 3691421 intergenic not near genes chr3L_4_3690001 chr3L_3690001 RAL-371_125b 1324 chr3L 3783228 3783279 chr3L 3783355 3783406 8 127 4.5 3.5 4.0 1.6 178 chr3L 3783228 intron CG32264 - chr3L 3783317 intron CG32264 - chr3L 3783406 intron CG32264 - chr3L_8_3780001 chr3L_3780001 RAL-371_125b 1325 chr3L 3798009 3798068 chr3L 3798140 3798199 10 129 4.5 1.0 2.8 2.6 190 chr3L 3798009 intron CG32264 - chr3L 3798104 intron CG32264 - chr3L 3798199 intron CG32264 - chr3L_10_3795001 chr3L_3795001 RAL-371_125b 1326 chr3L 3833696 3833727 chr3L 3833987 3834018 pogo 4 291 3.5 5.5 4.5 0.7 322 chr3L 3833696 intron enc + chr3L 3833857 intron enc + chr3L 3834018 intron enc + chr3L_4_3830001 chr3L_3830001 RAL-371_125b 1327 chr3L 3889104 3889131 chr3L 3889232 3889264 5 132 4.0 4.5 4.2 1.0 160 chr3L 3889104 intergenic not near genes chr3L 3889184 intergenic not near genes chr3L 3889264 intergenic not near genes chr3L_5_3885001 chr3L_3885001 RAL-371_125b 1328 chr3L 3890923 3890955 chr3L 3891044 3891086 9 125 2.5 0.0 1.2 4.1 163 chr3L 3890923 intergenic not near genes chr3L 3891004 intergenic not near genes chr3L 3891086 intergenic not near genes chr3L_9_3890001 chr3L_3890001 RAL-371_125b 1329 chr3L 3935820 3935843 chr3L 3935948 3935971 4 128 1.0 0.5 0.8 2.2 151 chr3L 3935820 5` UTR Eip63F-2 + chr3L 3935896 5` UTR Eip63F-2 + chr3L 3935971 5` UTR Eip63F-2 + chr3L_4_3935001 chr3L_3935001 RAL-371_125b 1330 chr3L 4015692 4015753 chr3L 4015825 4015863 11 131 2.5 1.5 2.0 3.7 171 chr3L 4015692 intergenic not near genes chr3L 4015778 intergenic not near genes chr3L 4015863 intergenic not near genes chr3L_11_4015001 chr3L_4015001 RAL-371_125b 1331 chr3L 4099431 4099491 chr3L 4099562 4099622 15 131 2.0 1.0 1.5 6.0 191 chr3L 4099431 intron CG14995 - chr3L 4099526 intron CG14995 - chr3L 4099622 intron CG14995 - chr3L_15_4095001 chr3L_4095001 RAL-371_125b 1332 chr3L 4164756 4164793 chr3L 4164877 4164919 9 124 4.0 2.0 3.0 2.2 163 chr3L 4164756 exon mas - chr3L 4164838 intron mas - chr3L 4164919 exon mas - chr3L_9_4160001 chr3L_4160001 RAL-371_125b 1333 chr3L 4187259 4187287 chr3L 4187407 4187435 8 148 6.0 3.5 4.8 1.4 176 chr3L 4187259 intron,intron CG18675 +,Teh2 - chr3L 4187347 intron,intron CG18675 +,Teh2 - chr3L 4187435 intron,intron CG18675 +,Teh2 - chr3L_8_4185001 chr3L_4185001 RAL-371_125b 1334 chr3L 4303063 4303138 chr3L 4303224 4303299 8 157 4.5 4.5 4.5 1.5 236 chr3L 4303063 intron dyl - chr3L 4303181 intron dyl - chr3L 4303299 intron dyl - chr3L_8_4300001 chr3L_4300001 RAL-371_125b 1335 chr3L 4328701 4328751 chr3L 4336249 4336299 412 9 7548 2.0 2.0 2.0 3.0 7598 chr3L 4328701 intron Cip4 - chr3L 4332500 intron Cip4 - chr3L 4336299 exon Cip4 - chr3L_9_4330001 chr3L_4330001 RAL-371_125b 1336 chr3L 4347782 4347852 chr3L 4347918 4347988 12 136 2.0 6.0 4.0 2.4 206 chr3L 4347782 intron,5` UTR Cip4 -,CR45156 + chr3L 4347885 intron Cip4 - chr3L 4347988 intron Cip4 - chr3L_12_4345001 chr3L_4345001 RAL-371_125b 1337 chr3L 4597186 4597236 chr3L 4597306 4597368 8 129 5.0 5.5 5.2 1.3 182 chr3L 4597186 intron Src64B - chr3L 4597277 intron Src64B - chr3L 4597368 intron Src64B - chr3L_8_4595001 chr3L_4595001 RAL-371_125b 1338 chr3L 4654143 4654210 chr3L 4654275 4654337 18 132 9.0 2.5 5.8 2.6 194 chr3L 4654143 intron axo - chr3L 4654240 intron axo - chr3L 4654337 intron axo - chr3L_18_4650001 chr3L_4650001 RAL-371_125b 1339 chr3L 4657983 4657991 chr3L 4658433 4658496 4 493 0.0 4.5 2.2 1.2 513 chr3L 4657983 intron axo - chr3L 4658240 intron axo - chr3L 4658496 intron axo - chr3L_4_4655001 chr3L_4655001 RAL-371_125b 1340 chr3L 4703428 4703494 chr3L 4703556 4703622 14 128 2.5 2.0 2.2 4.4 194 chr3L 4703428 intron,5` UTR RhoGEF64C +,CR43879 + chr3L 4703525 intron,intron RhoGEF64C +,CR43879 + chr3L 4703622 intron,5` UTR RhoGEF64C +,CR43879 + chr3L_14_4700001 chr3L_4700001 RAL-371_125b 1341 chr3L 4748662 4748717 chr3L 4748803 4748858 11 136 4.5 1.5 3.0 2.8 196 chr3L 4748662 intron RhoGEF64C + chr3L 4748760 intron RhoGEF64C + chr3L 4748858 intron RhoGEF64C + chr3L_11_4745001 chr3L_4745001 RAL-371_125b 1342 chr3L 4784925 4784957 chr3L 4785173 4785216 5 256 0.0 1.5 0.8 2.8 291 chr3L 4784925 intron RhoGEF64C + chr3L 4785070 intron RhoGEF64C + chr3L 4785216 intron RhoGEF64C + chr3L_5_4785001 chr3L_4785001 RAL-371_125b 1343 chr3L 4858268 4858295 chr3L 4858408 4858435 9 140 4.5 6.0 5.2 1.5 167 chr3L 4858268 intergenic not near genes chr3L 4858352 intergenic not near genes chr3L 4858435 intergenic not near genes chr3L_9_4855001 chr3L_4855001 RAL-371_125b 1344 chr3L 4858296 4858337 chr3L 4858401 4858437 9 127 3.0 5.5 4.2 1.7 141 chr3L 4858296 intergenic not near genes chr3L 4858366 intergenic not near genes chr3L 4858437 intergenic not near genes chr3L_9_4855001 chr3L_4855001 RAL-371_125b 1345 chr3L 4901092 4901147 chr3L 4907332 4907387 diver 6 6240 3.5 2.0 2.8 1.6 6295 chr3L 4901092 intergenic CG13704 + chr3L 4904240 intergenic not near genes chr3L 4907387 intergenic not near genes chr3L_6_4900001 chr3L_4900001 RAL-371_125b 1346 chr3L 5045413 5045478 chr3L 5050244 5050308 Doc 7 4830 3.0 3.0 3.0 1.8 4895 chr3L 5045413 5` UTR Con - chr3L 5047860 intron Con - chr3L 5050308 intron Con - chr3L_7_5045001 chr3L_5045001 RAL-371_125b 1347 chr3L 5104444 5104507 chr3L 5124628 5124691 17 20183 5.5 3.5 4.5 3.1 20247 chr3L 5104444 intergenic not near genes chr3L 5114568 intergenic not near genes chr3L 5124691 intergenic not near genes chr3L_17_5110001 chr3L_5110001 RAL-371_125b 1348 chr3L 5164597 5164640 chr3L 5164723 5164766 7 126 5.0 5.0 5.0 1.2 169 chr3L 5164597 intron shep - chr3L 5164682 intron shep - chr3L 5164766 intron shep - chr3L_7_5160001 chr3L_5160001 RAL-371_125b 1349 chr3L 5261129 5261182 chr3L 5261257 5261310 6 128 5.0 5.5 5.2 1.0 181 chr3L 5261129 intron shep - chr3L 5261220 intron shep - chr3L 5261310 intron shep - chr3L_6_5260001 chr3L_5260001 RAL-371_125b 1350 chr3L 5265301 5265376 chr3L 5265459 5265529 16 150 2.5 6.0 4.2 3.1 228 chr3L 5265301 intron shep - chr3L 5265415 intron shep - chr3L 5265529 intron shep - chr3L_16_5265001 chr3L_5265001 RAL-371_125b 1351 chr3L 5280085 5280117 chr3L 5280277 5280309 9 192 1.0 1.5 1.2 4.1 224 chr3L 5280085 intergenic not near genes chr3L 5280197 intergenic not near genes chr3L 5280309 intergenic not near genes chr3L_9_5280001 chr3L_5280001 RAL-371_125b 1352 chr3L 5376240 5376287 chr3L 5376368 5376416 6 129 1.0 5.0 3.0 1.5 176 chr3L 5376240 intergenic not near genes chr3L 5376328 intergenic not near genes chr3L 5376416 intergenic not near genes chr3L_6_5375001 chr3L_5375001 RAL-371_125b 1353 chr3L 5388161 5388230 chr3L 5388535 5388592 11 371 1.5 3.0 2.2 3.4 431 chr3L 5388161 intergenic not near genes chr3L 5388376 intergenic not near genes chr3L 5388592 intergenic not near genes chr3L_11_5385001 chr3L_5385001 RAL-371_125b 1354 chr3L 5393424 5393472 chr3L 5393636 5393684 7 212 2.0 3.0 2.5 2.0 260 chr3L 5393424 intergenic not near genes chr3L 5393554 intergenic not near genes chr3L 5393684 intergenic not near genes chr3L_7_5390001 chr3L_5390001 RAL-371_125b 1355 chr3L 5482944 5483072 chr3L 5483184 5483241 4 185 0.0 6.5 3.2 1.0 297 chr3L 5482944 exon CG4835 + chr3L 5483092 exon CG4835 + chr3L 5483241 exon CG4835 + chr3L_4_5480001 chr3L_5480001 RAL-371_125b 1356 chr3L 5486008 5486029 chr3L 5486148 5486169 5 140 7.5 0.0 3.8 1.0 161 chr3L 5486008 intergenic not near genes chr3L 5486088 intergenic not near genes chr3L 5486169 intergenic not near genes chr3L_5_5485001 chr3L_5485001 RAL-371_125b 1357 chr3L 5486032 5486075 chr3L 5486147 5486221 7 140 5.0 0.0 2.5 2.0 189 chr3L 5486032 intergenic not near genes chr3L 5486126 intergenic not near genes chr3L 5486221 intergenic not near genes chr3L_7_5485001 chr3L_5485001 RAL-371_125b 1358 chr3L 5504076 5504115 chr3L 5504208 5504247 8 132 3.5 2.5 3.0 2.0 171 chr3L 5504076 exon CG34342 - chr3L 5504162 intron CG34342 - chr3L 5504247 intron CG34342 - chr3L_8_5500001 chr3L_5500001 RAL-371_125b 1359 chr3L 5572132 5572157 chr3L 5572250 5572299 4 133 5.5 5.0 5.2 0.6 167 chr3L 5572132 intron Msr-110 - chr3L 5572216 intron Msr-110 - chr3L 5572299 intron Msr-110 - chr3L_4_5570001 chr3L_5570001 RAL-371_125b 1360 chr3L 5747417 5747471 chr3L 5747552 5747606 7 135 5.0 3.0 4.0 1.4 189 chr3L 5747417 3` UTR sif + chr3L 5747512 3` UTR sif + chr3L 5747606 3` UTR sif + chr3L_7_5745001 chr3L_5745001 RAL-371_125b 1361 chr3L 5909985 5910013 chr3L 5910274 5910304 pogo 9 291 6.0 0.0 3.0 2.2 319 chr3L 5909985 intron CG13288 + chr3L 5910144 intron CG13288 + chr3L 5910304 intron CG13288 + chr3L_9_5910001 chr3L_5910001 RAL-371_125b 1362 chr3L 5910336 5910405 chr3L 5910821 5910879 17 474 0.0 2.0 1.0 8.5 543 chr3L 5910336 intron CG13288 + chr3L 5910608 intron CG13288 + chr3L 5910879 intron CG13288 + chr3L_17_5910001 chr3L_5910001 RAL-371_125b 1363 chr3L 5926280 5926347 chr3L 5926510 5926542 11 234 1.0 5.0 3.0 2.8 262 chr3L 5926280 intron Vap-33B + chr3L 5926411 intron Vap-33B + chr3L 5926542 intron Vap-33B + chr3L_11_5925001 chr3L_5925001 RAL-371_125b 1364 chr3L 6001638 6001705 chr3L 6004388 6004455 jockey 16 2748 3.5 2.5 3.0 4.0 2817 chr3L 6001638 intron PVRAP + chr3L 6003046 intron PVRAP + chr3L 6004455 intron PVRAP + chr3L_16_6000001 chr3L_6000001 RAL-371_125b 1365 chr3L 6040335 6040375 chr3L 6042741 6042781 Doc 7 2406 3.0 4.0 3.5 1.6 2446 chr3L 6040335 intergenic Jon65Aiv + chr3L 6041558 intergenic not near genes chr3L 6042781 intergenic not near genes chr3L_7_6040001 chr3L_6040001 RAL-371_125b 1366 chr3L 6052622 6052652 chr3L 6052756 6052776 4 129 7.0 8.0 7.5 0.5 154 chr3L 6052622 exon Jon65Aii + chr3L 6052699 intron Jon65Aii + chr3L 6052776 exon Jon65Aii + chr3L_4_6050001 chr3L_6050001 RAL-371_125b 1367 chr3L 6098416 6098484 chr3L 6098568 6098636 13 152 5.5 5.5 5.5 2.0 220 chr3L 6098416 5` UTR Ets65A + chr3L 6098526 intron Ets65A + chr3L 6098636 intron Ets65A + chr3L_13_6095001 chr3L_6095001 RAL-371_125b 1368 chr3L 6116657 6116727 chr3L 6116791 6116861 13 134 2.5 6.0 4.2 2.5 204 chr3L 6116657 intron Ets65A + chr3L 6116759 intron Ets65A + chr3L 6116861 intron Ets65A + chr3L_13_6115001 chr3L_6115001 RAL-371_125b 1369 chr3L 6155671 6155713 chr3L 6155807 6155849 11 136 2.0 0.0 1.0 5.5 178 chr3L 6155671 intergenic CR45421 - chr3L 6155760 intergenic not near genes chr3L 6155849 intergenic not near genes chr3L_11_6155001 chr3L_6155001 RAL-371_125b 1370 chr3L 6220883 6220926 chr3L 6230085 6230128 roo 9 9202 4.5 3.0 3.8 1.9 9245 chr3L 6220883 5` UTR pncr008:3L + chr3L 6225506 intergenic not near genes chr3L 6230128 intergenic not near genes chr3L_9_6225001 chr3L_6225001 RAL-371_125b 1371 chr3L 6231298 6231348 chr3L 6231434 6231483 7 136 3.5 0.0 1.8 2.5 185 chr3L 6231298 intergenic not near genes chr3L 6231390 intergenic CG13299 - chr3L 6231483 intergenic CG13299 - chr3L_7_6230001 chr3L_6230001 RAL-371_125b 1372 chr3L 6267314 6267335 chr3L 6267452 6267473 8 136 2.5 8.5 5.5 1.2 159 chr3L 6267314 intergenic not near genes chr3L 6267394 intergenic not near genes chr3L 6267473 intergenic not near genes chr3L_8_6265001 chr3L_6265001 RAL-371_125b 1373 chr3L 6335011 6335041 chr3L 6335501 6335562 297 6 513 2.5 4.0 3.2 1.4 551 chr3L 6335011 intron CG13300 - chr3L 6335286 intron CG13300 - chr3L 6335562 intron CG13300 - chr3L_6_6335001 chr3L_6335001 RAL-371_125b 1374 chr3L 6353363 6353407 chr3L 6353469 6353521 7 123 0.5 4.0 2.2 2.2 158 chr3L 6353363 intergenic not near genes chr3L 6353442 intergenic not near genes chr3L 6353521 intergenic not near genes chr3L_7_6350001 chr3L_6350001 RAL-371_125b 1375 chr3L 6362336 6362408 chr3L 6362463 6362535 5 127 1.5 0.5 1.0 2.5 199 chr3L 6362336 intergenic not near genes chr3L 6362436 intergenic not near genes chr3L 6362535 intergenic not near genes chr3L_5_6360001 chr3L_6360001 RAL-371_125b 1376 chr3L 6405619 6405674 chr3L 6432133 6432188 roo 8 26514 4.0 3.0 3.5 1.8 26569 chr3L 6405619 intron CG42747 + chr3L 6418904 intron CG42747 + chr3L 6432188 intron CG42747 + chr3L_8_6415001 chr3L_6415001 RAL-371_125b 1377 chr3L 6620566 6620598 chr3L 6621056 6621088 Rt1c 12 490 3.0 9.5 6.2 1.7 522 chr3L 6620566 intergenic not near genes chr3L 6620827 intergenic not near genes chr3L 6621088 intergenic not near genes chr3L_12_6620001 chr3L_6620001 RAL-371_125b 1378 chr3L 6621719 6621752 chr3L 6621952 6621985 6 233 2.0 4.0 3.0 1.5 266 chr3L 6621719 intergenic not near genes chr3L 6621852 intergenic not near genes chr3L 6621985 intergenic not near genes chr3L_6_6620001 chr3L_6620001 RAL-371_125b 1379 chr3L 6686802 6686808 chr3L 6687081 6687105 4 284 25.5 26.0 25.8 0.1 303 chr3L 6686802 intergenic not near genes chr3L 6686954 intergenic not near genes chr3L 6687105 intergenic not near genes chr3L_4_6685001 chr3L_6685001 RAL-371_125b 1380 chr3L 6781089 6781138 chr3L 6783152 6783201 Doc 10 2063 2.0 1.5 1.8 3.6 2112 chr3L 6781089 intergenic not near genes chr3L 6782145 intergenic not near genes chr3L 6783201 intergenic not near genes chr3L_10_6780001 chr3L_6780001 RAL-371_125b 1381 chr3L 6835888 6835921 chr3L 6836016 6836049 6 127 4.0 4.0 4.0 1.2 161 chr3L 6835888 intergenic not near genes chr3L 6835968 intergenic not near genes chr3L 6836049 intergenic not near genes chr3L_6_6835001 chr3L_6835001 RAL-371_125b 1382 chr3L 6855882 6855948 chr3L 6860717 6860783 Doc 8 4833 1.5 3.5 2.5 2.3 4901 chr3L 6855882 intergenic not near genes chr3L 6858332 intergenic not near genes chr3L 6860783 intergenic not near genes chr3L_8_6855001 chr3L_6855001 RAL-371_125b 1383 chr3L 6868672 6868740 chr3L 6868800 6868868 11 128 0.0 2.5 1.2 5.0 196 chr3L 6868672 intergenic not near genes chr3L 6868770 intergenic not near genes chr3L 6868868 intergenic not near genes chr3L_11_6865001 chr3L_6865001 RAL-371_125b 1384 chr3L 6887493 6887531 chr3L 6895035 6895073 roo 9 7542 3.0 5.5 4.2 1.7 7580 chr3L 6887493 intergenic not near genes chr3L 6891283 intergenic not near genes chr3L 6895073 intergenic not near genes chr3L_9_6890001 chr3L_6890001 RAL-371_125b 1385 chr3L 6907990 6908047 chr3L 6908105 6908175 13 124 3.0 0.5 1.8 4.6 185 chr3L 6907990 intergenic not near genes chr3L 6908082 intergenic not near genes chr3L 6908175 intergenic not near genes chr3L_13_6905001 chr3L_6905001 RAL-371_125b 1386 chr3L 6934298 6934364 chr3L 6934459 6934475 6 151 5.0 4.5 4.8 1.0 177 chr3L 6934298 exon CG14820 + chr3L 6934386 intron CG14820 + chr3L 6934475 intron CG14820 + chr3L_6_6930001 chr3L_6930001 RAL-371_125b 1387 chr3L 7061364 7061407 chr3L 7061500 7061543 13 135 1.0 2.5 1.8 4.6 179 chr3L 7061364 intron CG8641 - chr3L 7061454 intron CG8641 - chr3L 7061543 intron CG8641 - chr3L_13_7060001 chr3L_7060001 RAL-371_125b 1388 chr3L 7090877 7090943 chr3L 7091010 7091077 9 134 1.5 2.0 1.8 3.2 200 chr3L 7090877 intergenic not near genes chr3L 7090977 intergenic not near genes chr3L 7091077 intergenic not near genes chr3L_9_7090001 chr3L_7090001 RAL-371_125b 1389 chr3L 7091491 7091558 chr3L 7091616 7091638 13 113 4.0 5.0 4.5 2.4 147 chr3L 7091491 intergenic not near genes chr3L 7091564 intergenic not near genes chr3L 7091638 intergenic not near genes chr3L_13_7090001 chr3L_7090001 RAL-371_125b 1390 chr3L 7129911 7129971 chr3L 7130153 7130213 BS 6 242 0.0 2.5 1.2 2.7 302 chr3L 7129911 intergenic CG15829 + chr3L 7130062 intergenic CG15829 + chr3L 7130213 intergenic not near genes chr3L_6_7130001 chr3L_7130001 RAL-371_125b 1391 chr3L 7233294 7233336 chr3L 7233427 7233469 6 132 5.5 1.5 3.5 1.3 175 chr3L 7233294 intergenic not near genes chr3L 7233382 intergenic not near genes chr3L 7233469 intergenic not near genes chr3L_6_7230001 chr3L_7230001 RAL-371_125b 1392 chr3L 7236580 7236618 chr3L 7236806 7236844 5 226 4.0 1.5 2.8 1.3 264 chr3L 7236580 intergenic CG14829 - chr3L 7236712 intergenic CG14829 - chr3L 7236844 3` UTR CG14829 - chr3L_5_7235001 chr3L_7235001 RAL-371_125b 1393 chr3L 7258923 7258931 chr3L 7259113 7259121 4 190 2.0 7.0 4.5 0.7 198 chr3L 7258923 intron CG14830 - chr3L 7259022 intron CG14830 - chr3L 7259121 intron CG14830 - chr3L_4_7255001 chr3L_7255001 RAL-371_125b 1394 chr3L 7285400 7285458 chr3L 7285528 7285586 15 127 1.5 0.0 0.8 8.3 186 chr3L 7285400 intron unc-13-4A - chr3L 7285493 intron unc-13-4A - chr3L 7285586 intron unc-13-4A - chr3L_15_7285001 chr3L_7285001 RAL-371_125b 1395 chr3L 7318154 7318176 chr3L 7318299 7318321 6 145 5.5 1.0 3.2 1.4 167 chr3L 7318154 intergenic not near genes chr3L 7318238 intergenic not near genes chr3L 7318321 intergenic not near genes chr3L_6_7315001 chr3L_7315001 RAL-371_125b 1396 chr3L 7318181 7318209 chr3L 7318295 7318354 5 139 4.0 1.0 2.5 1.4 173 chr3L 7318181 intergenic not near genes chr3L 7318268 intergenic not near genes chr3L 7318354 intergenic not near genes chr3L_5_7315001 chr3L_7315001 RAL-371_125b 1397 chr3L 7353078 7353146 chr3L 7353205 7353273 11 127 4.0 2.5 3.2 2.6 195 chr3L 7353078 3` UTR qm + chr3L 7353176 3` UTR qm + chr3L 7353273 3` UTR qm + chr3L_11_7350001 chr3L_7350001 RAL-371_125b 1398 chr3L 7377277 7377338 chr3L 7380432 7380493 297 10 3155 2.0 5.0 3.5 2.2 3216 chr3L 7377277 intron SMSr - chr3L 7378885 intron SMSr - chr3L 7380493 intron SMSr - chr3L_10_7375001 chr3L_7375001 RAL-371_125b 1399 chr3L 7443973 7444046 chr3L 7444121 7444186 8 147 1.5 0.0 0.8 4.4 213 chr3L 7443973 intron CG42458 + chr3L 7444080 intron CG42458 + chr3L 7444186 intron CG42458 + chr3L_8_7440001 chr3L_7440001 RAL-371_125b 1400 chr3L 7449435 7449453 chr3L 7449530 7449583 7 123 0.0 3.0 1.5 2.8 148 chr3L 7449435 intron CG42458 + chr3L 7449509 intron CG42458 + chr3L 7449583 intron CG42458 + chr3L_7_7445001 chr3L_7445001 RAL-371_125b 1401 chr3L 7498727 7498778 chr3L 7503554 7503605 F-element 11 4827 4.5 3.0 3.8 2.3 4878 chr3L 7498727 5` UTR CG8539 - chr3L 7501166 intergenic not near genes chr3L 7503605 intergenic not near genes chr3L_11_7500001 chr3L_7500001 RAL-371_125b 1402 chr3L 7505395 7505431 chr3L 7505521 7505557 9 125 3.5 6.0 4.8 1.6 162 chr3L 7505395 intergenic CG7548 - chr3L 7505476 intergenic CG7548 - chr3L 7505557 3` UTR CG7548 - chr3L_9_7505001 chr3L_7505001 RAL-371_125b 1403 chr3L 7549059 7549088 chr3L 7549209 7549238 4 150 5.5 5.5 5.5 0.6 179 chr3L 7549059 intergenic not near genes chr3L 7549148 intergenic not near genes chr3L 7549238 intergenic not near genes chr3L_4_7545001 chr3L_7545001 RAL-371_125b 1404 chr3L 7574799 7574857 chr3L 7574939 7574984 4 130 0.0 0.0 0.0 4.0 185 chr3L 7574799 intergenic not near genes chr3L 7574892 intergenic not near genes chr3L 7574984 intergenic not near genes chr3L_4_7570001 chr3L_7570001 RAL-371_125b 1405 chr3L 7576169 7576228 chr3L 7576307 7576360 12 137 2.5 3.0 2.8 3.2 191 chr3L 7576169 intergenic not near genes chr3L 7576264 intergenic not near genes chr3L 7576360 intergenic not near genes chr3L_12_7575001 chr3L_7575001 RAL-371_125b 1406 chr3L 7591102 7591179 chr3L 7591243 7591275 13 129 1.5 3.5 2.5 3.7 173 chr3L 7591102 intergenic CG7716 - chr3L 7591188 intergenic CG7716 - chr3L 7591275 intergenic CG7716 - chr3L_13_7590001 chr3L_7590001 RAL-371_125b 1407 chr3L 7752107 7752162 chr3L 7752260 7752319 12 151 5.0 5.0 5.0 2.0 212 chr3L 7752107 intron CG32373 + chr3L 7752213 intron CG32373 + chr3L 7752319 intron CG32373 + chr3L_12_7750001 chr3L_7750001 RAL-371_125b 1408 chr3L 7767522 7767550 chr3L 7767703 7767721 6 177 4.5 4.5 4.5 1.1 199 chr3L 7767522 intron,exon Clk -,CG32371 - chr3L 7767622 intron,exon Clk -,CG32371 - chr3L 7767721 intron,exon Clk -,CG32371 - chr3L_6_7765001 chr3L_7765001 RAL-371_125b 1409 chr3L 7793670 7793719 chr3L 7800772 7800821 297 14 7102 6.5 3.0 4.8 2.4 7151 chr3L 7793670 intron CG32369 - chr3L 7797246 intron CG32369 - chr3L 7800821 intron CG32369 - chr3L_14_7795001 chr3L_7795001 RAL-371_125b 1410 chr3L 7814663 7814715 chr3L 7814798 7814839 8 133 3.0 3.0 3.0 2.0 176 chr3L 7814663 3` UTR Pdp1 - chr3L 7814751 3` UTR Pdp1 - chr3L 7814839 3` UTR Pdp1 - chr3L_8_7810001 chr3L_7810001 RAL-371_125b 1411 chr3L 7886472 7886541 chr3L 7889040 7889108 Stalker4 14 2566 4.0 3.0 3.5 3.1 2636 chr3L 7886472 intron CG32365 + chr3L 7887790 intron CG32365 + chr3L 7889108 intron CG32365 + chr3L_14_7885001 chr3L_7885001 RAL-371_125b 1412 chr3L 7916786 7916848 chr3L 7926007 7926069 roo 7 9217 6.0 2.5 4.2 1.3 9283 chr3L 7916786 3` UTR syd - chr3L 7921428 intron syd - chr3L 7926069 3` UTR syd - chr3L_7_7920001 chr3L_7920001 RAL-371_125b 1413 chr3L 8009537 8009568 chr3L 8009681 8009712 5 144 0.0 5.0 2.5 1.4 175 chr3L 8009537 intron nmo + chr3L 8009624 intron nmo + chr3L 8009712 intron nmo + chr3L_5_8005001 chr3L_8005001 RAL-371_125b 1414 chr3L 8062797 8062850 chr3L 8062925 8062978 7 128 3.0 6.0 4.5 1.3 181 chr3L 8062797 intergenic not near genes chr3L 8062888 intergenic not near genes chr3L 8062978 intergenic not near genes chr3L_7_8060001 chr3L_8060001 RAL-371_125b 1415 chr3L 8149720 8149780 chr3L 8149875 8149935 13 155 4.5 2.5 3.5 2.9 215 chr3L 8149720 intron CG13676 - chr3L 8149828 intron CG13676 - chr3L 8149935 intron CG13676 - chr3L_13_8145001 chr3L_8145001 RAL-371_125b 1416 chr3L 8203495 8203529 chr3L 8203622 8203655 7 120 4.0 5.0 4.5 1.3 160 chr3L 8203495 intergenic CG13679 + chr3L 8203575 intergenic CG13679 + chr3L 8203655 intergenic CG13679 + chr3L_7_8200001 chr3L_8200001 RAL-371_125b 1417 chr3L 8203530 8203568 chr3L 8203616 8203695 10 119 3.5 5.0 4.2 1.9 165 chr3L 8203530 intergenic CG13679 + chr3L 8203612 intergenic CG13679 + chr3L 8203695 intergenic CG13679 + chr3L_10_8200001 chr3L_8200001 RAL-371_125b 1418 chr3L 8295763 8295818 chr3L 8295961 8296023 15 206 5.0 5.5 5.2 2.4 260 chr3L 8295763 intergenic CG7201 - chr3L 8295893 intergenic not near genes chr3L 8296023 intergenic not near genes chr3L_15_8295001 chr3L_8295001 RAL-371_125b 1419 chr3L 8331708 8331739 chr3L 8331812 8331874 7 135 2.5 1.5 2.0 2.3 166 chr3L 8331708 intergenic not near genes chr3L 8331791 intergenic not near genes chr3L 8331874 intergenic not near genes chr3L_7_8330001 chr3L_8330001 RAL-371_125b 1420 chr3L 8443553 8443580 chr3L 8443685 8443712 10 131 2.0 6.5 4.2 1.9 159 chr3L 8443553 3` UTR CG6983 - chr3L 8443632 3` UTR CG6983 - chr3L 8443712 3` UTR CG6983 - chr3L_10_8440001 chr3L_8440001 RAL-371_125b 1421 chr3L 8456430 8456480 chr3L 8456571 8456616 14 133 7.5 6.5 7.0 1.8 186 chr3L 8456430 intron Gug + chr3L 8456523 intron Gug + chr3L 8456616 intron Gug + chr3L_14_8455001 chr3L_8455001 RAL-371_125b 1422 chr3L 8481749 8481801 chr3L 8490958 8491010 roo 12 9199 5.5 8.0 6.8 1.5 9261 chr3L 8481749 intron CG43163 - chr3L 8486380 intron CG43163 - chr3L 8491010 intron CG43163 - chr3L_12_8485001 chr3L_8485001 RAL-371_125b 1423 chr3L 8491600 8491647 chr3L 8491726 8491779 14 129 2.0 4.5 3.2 3.3 179 chr3L 8491600 intron CG43163 - chr3L 8491690 intron CG43163 - chr3L 8491779 intron CG43163 - chr3L_14_8490001 chr3L_8490001 RAL-371_125b 1424 chr3L 8498259 8498316 chr3L 8505773 8505833 blood 5 7516 0.5 3.0 1.8 1.8 7574 chr3L 8498259 intron CG43163 - chr3L 8502046 intron CG43163 - chr3L 8505833 intron CG43163 - chr3L_5_8500001 chr3L_8500001 RAL-371_125b 1425 chr3L 8519436 8519475 chr3L 8519870 8519872 8 425 5.0 2.5 3.8 1.7 436 chr3L 8519436 intron GstO3 + chr3L 8519654 exon GstO3 + chr3L 8519872 exon GstO3 + chr3L_8_8515001 chr3L_8515001 RAL-371_125b 1426 chr3L 8519481 8519498 chr3L 8519866 8519932 7 427 3.0 2.5 2.8 1.8 451 chr3L 8519481 intron GstO3 + chr3L 8519706 exon GstO3 + chr3L 8519932 exon GstO3 + chr3L_7_8515001 chr3L_8515001 RAL-371_125b 1427 chr3L 8545990 8546051 chr3L 8546120 8546186 9 134 5.0 2.5 3.8 1.9 196 chr3L 8545990 intron rhea + chr3L 8546088 intron rhea + chr3L 8546186 intron rhea + chr3L_9_8545001 chr3L_8545001 RAL-371_125b 1428 chr3L 8548617 8548682 chr3L 8548740 8548793 10 119 4.5 7.0 5.8 1.5 176 chr3L 8548617 intron rhea + chr3L 8548705 intron rhea + chr3L 8548793 intron rhea + chr3L_10_8545001 chr3L_8545001 RAL-371_125b 1429 chr3L 8583451 8583498 chr3L 8583593 8583604 4 128 3.0 0.0 1.5 1.6 153 chr3L 8583451 intron CG43078 + chr3L 8583528 intron CG43078 + chr3L 8583604 intron CG43078 + chr3L_4_8580001 chr3L_8580001 RAL-371_125b 1430 chr3L 8583500 8583509 chr3L 8583591 8583609 4 101 1.5 0.0 0.8 2.2 109 chr3L 8583500 intron CG43078 + chr3L 8583554 intron CG43078 + chr3L 8583609 intron CG43078 + chr3L_4_8580001 chr3L_8580001 RAL-371_125b 1431 chr3L 8727785 8727827 chr3L 8727918 8727960 8 133 4.0 4.5 4.2 1.5 175 chr3L 8727785 intergenic Cp18 + chr3L 8727872 intergenic Cp18 + chr3L 8727960 intergenic Cp18 + chr3L_8_8725001 chr3L_8725001 RAL-371_125b 1432 chr3L 8791236 8791287 chr3L 8796706 8796756 I-element 5 5468 3.5 1.0 2.2 1.6 5520 chr3L 8791236 exon Fhos + chr3L 8793996 intron Fhos + chr3L 8796756 intron Fhos + chr3L_5_8790001 chr3L_8790001 RAL-371_125b 1433 chr3L 8839718 8839755 chr3L 8839857 8839894 6 139 2.0 3.5 2.8 1.6 176 chr3L 8839718 intron dally + chr3L 8839806 intron dally + chr3L 8839894 intron dally + chr3L_6_8835001 chr3L_8835001 RAL-371_125b 1434 chr3L 8861471 8861540 chr3L 8861621 8861681 7 146 0.0 2.5 1.2 3.2 210 chr3L 8861471 intron dally + chr3L 8861576 intron dally + chr3L 8861681 intron dally + chr3L_7_8860001 chr3L_8860001 RAL-371_125b 1435 chr3L 9003911 9003957 chr3L 9004034 9004092 9 134 5.0 3.0 4.0 1.8 181 chr3L 9003911 intergenic not near genes chr3L 9004002 intergenic not near genes chr3L 9004092 intergenic not near genes chr3L_9_9000001 chr3L_9000001 RAL-371_125b 1436 chr3L 9009918 9009971 chr3L 9010072 9010125 12 154 2.5 4.0 3.2 2.9 207 chr3L 9009918 intergenic CG5194 - chr3L 9010022 intergenic CG5194 - chr3L 9010125 intergenic CG5194 - chr3L_12_9010001 chr3L_9010001 RAL-371_125b 1437 chr3L 9030385 9030450 chr3L 9030514 9030579 8 129 1.0 1.0 1.0 4.0 194 chr3L 9030385 intergenic not near genes chr3L 9030482 intergenic not near genes chr3L 9030579 intergenic not near genes chr3L_8_9030001 chr3L_9030001 RAL-371_125b 1438 chr3L 9047045 9047108 chr3L 9047182 9047245 11 137 0.5 3.5 2.0 3.7 200 chr3L 9047045 intergenic CG5144 + chr3L 9047145 intergenic CG5144 + chr3L 9047245 intergenic CG5144 + chr3L_11_9045001 chr3L_9045001 RAL-371_125b 1439 chr3L 9061107 9061163 chr3L 9061260 9061305 11 148 2.5 7.5 5.0 1.8 198 chr3L 9061107 intron Argk - chr3L 9061206 intron Argk - chr3L 9061305 intron Argk - chr3L_11_9060001 chr3L_9060001 RAL-371_125b 1440 chr3L 9066502 9066561 chr3L 9066653 9066712 10 147 3.0 2.0 2.5 2.9 210 chr3L 9066502 intergenic Argk - chr3L 9066607 intergenic not near genes chr3L 9066712 intergenic CG4911 - chr3L_10_9065001 chr3L_9065001 RAL-371_125b 1441 chr3L 9076890 9076912 chr3L 9084500 9084522 412 4 7608 13.0 8.0 10.5 0.3 7632 chr3L 9076890 exon Tequila + chr3L 9080706 intron Tequila + chr3L 9084522 exon Tequila + chr3L_4_9080001 chr3L_9080001 RAL-371_125b 1442 chr3L 9086206 9086217 chr3L 9086339 9086350 5 133 11.5 10.5 11.0 0.4 144 chr3L 9086206 exon Tequila + chr3L 9086278 exon Tequila + chr3L 9086350 exon Tequila + chr3L_5_9085001 chr3L_9085001 RAL-371_125b 1443 chr3L 9125747 9125776 chr3L 9125874 9125903 5 127 4.5 1.0 2.8 1.3 156 chr3L 9125747 intron bol - chr3L 9125825 intron bol - chr3L 9125903 intron bol - chr3L_5_9125001 chr3L_9125001 RAL-371_125b 1444 chr3L 9129152 9129212 chr3L 9129282 9129342 8 130 4.5 1.5 3.0 2.0 190 chr3L 9129152 intron bol - chr3L 9129247 intron bol - chr3L 9129342 intron bol - chr3L_8_9125001 chr3L_9125001 RAL-371_125b 1445 chr3L 9130526 9130572 chr3L 9134320 9134383 412 10 3805 4.5 3.5 4.0 2.0 3857 chr3L 9130526 intergenic bol - chr3L 9132454 intergenic not near genes chr3L 9134383 intergenic Dhpr + chr3L_10_9130001 chr3L_9130001 RAL-371_125b 1446 chr3L 9164669 9164679 chr3L 9166186 9166196 hobo 4 1517 5.0 0.0 2.5 1.1 1527 chr3L 9164669 intron Rdl - chr3L 9165432 intron Rdl - chr3L 9166196 intron Rdl - chr3L_4_9165001 chr3L_9165001 RAL-371_125b 1447 chr3L 9219207 9219273 chr3L 9219929 9219945 jockey 8 714 5.0 3.5 4.2 1.5 738 chr3L 9219207 intergenic not near genes chr3L 9219576 intergenic not near genes chr3L 9219945 intergenic not near genes chr3L_8_9215001 chr3L_9215001 RAL-371_125b 1448 chr3L 9270574 9270645 chr3L 9278379 9278403 roo 7 7793 3.5 4.0 3.8 1.5 7829 chr3L 9270574 intron GluRIB + chr3L 9274488 intron GluRIB + chr3L 9278403 exon GluRIB + chr3L_7_9270001 chr3L_9270001 RAL-371_125b 1449 chr3L 9320377 9320417 chr3L 9320491 9320548 8 128 5.5 4.5 5.0 1.3 171 chr3L 9320377 intergenic not near genes chr3L 9320462 intergenic not near genes chr3L 9320548 intergenic not near genes chr3L_8_9320001 chr3L_9320001 RAL-371_125b 1450 chr3L 9332624 9332651 chr3L 9333061 9333076 5 430 4.0 2.5 3.2 1.2 452 chr3L 9332624 intergenic not near genes chr3L 9332850 intergenic not near genes chr3L 9333076 intergenic not near genes chr3L_5_9330001 chr3L_9330001 RAL-371_125b 1451 chr3L 9332656 9332687 chr3L 9333056 9333127 6 415 1.0 1.5 1.2 2.7 471 chr3L 9332656 intergenic not near genes chr3L 9332892 intergenic not near genes chr3L 9333127 intergenic not near genes chr3L_6_9330001 chr3L_9330001 RAL-371_125b 1452 chr3L 9359544 9359602 chr3L 9359685 9359743 7 141 1.5 2.5 2.0 2.3 199 chr3L 9359544 3` UTR CG32039 + chr3L 9359644 3` UTR CG32039 + chr3L 9359743 3` UTR CG32039 + chr3L_7_9355001 chr3L_9355001 RAL-371_125b 1453 chr3L 9443502 9443534 chr3L 9445343 9445375 S-element 7 1840 2.5 10.0 6.2 1.0 1873 chr3L 9443502 intron CG33926 + chr3L 9444438 intron CG33926 + chr3L 9445375 intron CG33926 + chr3L_7_9440001 chr3L_9440001 RAL-371_125b 1454 chr3L 9501672 9501715 chr3L 9502191 9502251 roo 6 532 1.5 4.0 2.8 1.6 579 chr3L 9501672 intron path - chr3L 9501962 intron path - chr3L 9502251 intron path - chr3L_6_9500001 chr3L_9500001 RAL-371_125b 1455 chr3L 9502591 9502635 chr3L 9502716 9502765 8 129 3.5 4.0 3.8 1.7 174 chr3L 9502591 intron path - chr3L 9502678 intron path - chr3L 9502765 intron path - chr3L_8_9500001 chr3L_9500001 RAL-371_125b 1456 chr3L 9510877 9510954 chr3L 9511020 9511083 21 140 0.0 2.5 1.2 9.5 206 chr3L 9510877 intron RpS9 - chr3L 9510980 intron RpS9 - chr3L 9511083 exon RpS9 - chr3L_21_9510001 chr3L_9510001 RAL-371_125b 1457 chr3L 9513406 9513452 chr3L 9513543 9513589 6 137 6.0 3.0 4.5 1.1 183 chr3L 9513406 exon CG33702 - chr3L 9513498 intergenic CG33702 - chr3L 9513589 intergenic CG33702 - chr3L_6_9510001 chr3L_9510001 RAL-371_125b 1458 chr3L 9526446 9526498 chr3L 9528176 9528228 Doc 11 1730 3.5 4.5 4.0 2.2 1782 chr3L 9526446 intergenic not near genes chr3L 9527337 intergenic not near genes chr3L 9528228 intergenic not near genes chr3L_11_9525001 chr3L_9525001 RAL-371_125b 1459 chr3L 9533709 9533762 chr3L 9541319 9541351 412 6 7606 6.5 7.0 6.8 0.8 7642 chr3L 9533709 intergenic not near genes chr3L 9537530 intergenic not near genes chr3L 9541351 intergenic not near genes chr3L_6_9535001 chr3L_9535001 RAL-371_125b 1460 chr3L 9571865 9571914 chr3L 9572263 9572312 jockey 11 398 5.5 7.0 6.2 1.5 447 chr3L 9571865 intron CG42673 + chr3L 9572088 intron CG42673 + chr3L 9572312 intron CG42673 + chr3L_11_9570001 chr3L_9570001 RAL-371_125b 1461 chr3L 9575877 9575890 chr3L 9580999 9581018 jockey 4 5126 8.0 2.0 5.0 0.7 5141 chr3L 9575877 intron CG42673 + chr3L 9578448 intron CG42673 + chr3L 9581018 intron CG42673 + chr3L_4_9575001 chr3L_9575001 RAL-371_125b 1462 chr3L 9575891 9575931 chr3L 9580994 9581059 jockey 12 5119 3.5 1.5 2.5 3.4 5168 chr3L 9575891 intron CG42673 + chr3L 9578475 intron CG42673 + chr3L 9581059 intron CG42673 + chr3L_12_9575001 chr3L_9575001 RAL-371_125b 1463 chr3L 9613857 9613894 chr3L 9613994 9614031 7 137 2.0 0.0 1.0 3.5 174 chr3L 9613857 3` UTR CG3280 + chr3L 9613944 intergenic CG3280 + chr3L 9614031 intergenic CG3280 + chr3L_7_9610001 chr3L_9610001 RAL-371_125b 1464 chr3L 9646772 9646841 chr3L 9646920 9646985 4 147 3.0 4.5 3.8 0.8 213 chr3L 9646772 intron,intron fry -,CG33696 + chr3L 9646878 intron,intron fry -,CG33696 + chr3L 9646985 intron,intron fry -,CG33696 + chr3L_4_9645001 chr3L_9645001 RAL-371_125b 1465 chr3L 9741576 9741622 chr3L 9741718 9741753 13 138 2.5 3.5 3.0 3.2 177 chr3L 9741576 intron,intron CG42268 -,CR44348 + chr3L 9741664 intron,intron CG42268 -,CR44348 + chr3L 9741753 intron,intron CG42268 -,CR44348 + chr3L_13_9740001 chr3L_9740001 RAL-371_125b 1466 chr3L 9809686 9809739 chr3L 9809813 9809835 8 121 4.0 4.0 4.0 1.6 149 chr3L 9809686 intergenic not near genes chr3L 9809760 intergenic not near genes chr3L 9809835 intergenic not near genes chr3L_8_9805001 chr3L_9805001 RAL-371_125b 1467 chr3L 9831668 9831724 chr3L 9831799 9831855 8 131 1.0 4.5 2.8 2.1 187 chr3L 9831668 intron CG43897 + chr3L 9831762 intron CG43897 + chr3L 9831855 intron CG43897 + chr3L_8_9830001 chr3L_9830001 RAL-371_125b 1468 chr3L 9879324 9879391 chr3L 9879529 9879566 13 200 5.5 1.5 3.5 2.9 242 chr3L 9879324 5` UTR CG34382 + chr3L 9879445 5` UTR CG34382 + chr3L 9879566 exon CG34382 + chr3L_13_9875001 chr3L_9875001 RAL-371_125b 1469 chr3L 9929625 9929697 chr3L 9938456 9938528 roo 7 8831 2.0 1.5 1.8 2.5 8903 chr3L 9929625 intron CG34356 + chr3L 9934076 intron CG34356 + chr3L 9938528 intron CG34356 + chr3L_7_9930001 chr3L_9930001 RAL-371_125b 1470 chr3L 9987069 9987139 chr3L 9987197 9987267 11 120 1.0 5.0 3.0 2.8 198 chr3L 9987069 intron dpr6 + chr3L 9987168 intron dpr6 + chr3L 9987267 intron dpr6 + chr3L_11_9985001 chr3L_9985001 RAL-371_125b 1471 chr3L 9994058 9994085 chr3L 9994194 9994221 7 136 3.0 4.5 3.8 1.5 163 chr3L 9994058 intron dpr6 + chr3L 9994140 intron dpr6 + chr3L 9994221 intron dpr6 + chr3L_7_9990001 chr3L_9990001 RAL-371_125b 1472 chr3L 10003113 10003171 chr3L 10003260 10003318 9 147 5.5 4.5 5.0 1.5 205 chr3L 10003113 intron dpr6 + chr3L 10003216 intron dpr6 + chr3L 10003318 intron dpr6 + chr3L_9_10000001 chr3L_10000001 RAL-371_125b 1473 chr3L 10007143 10007205 chr3L 10007295 10007358 11 153 2.5 3.5 3.0 2.8 215 chr3L 10007143 intron dpr6 + chr3L 10007250 intron dpr6 + chr3L 10007358 intron dpr6 + chr3L_11_10005001 chr3L_10005001 RAL-371_125b 1474 chr3L 10032502 10032554 chr3L 10032638 10032691 4 136 0.0 6.0 3.0 1.0 189 chr3L 10032502 intron dpr6 + chr3L 10032596 intron dpr6 + chr3L 10032691 intron dpr6 + chr3L_4_10030001 chr3L_10030001 RAL-371_125b 1475 chr3L 10075715 10075776 chr3L 10075861 10075922 10 145 3.0 4.5 3.8 2.1 207 chr3L 10075715 intron dpr6 + chr3L 10075818 intron dpr6 + chr3L 10075922 intron dpr6 + chr3L_10_10075001 chr3L_10075001 RAL-371_125b 1476 chr3L 10116137 10116180 chr3L 10116243 10116282 4 108 0.5 4.0 2.2 1.2 145 chr3L 10116137 intron dpr6 + chr3L 10116210 intron dpr6 + chr3L 10116282 intron dpr6 + chr3L_4_10115001 chr3L_10115001 RAL-371_125b 1477 chr3L 10219186 10219260 chr3L 10219333 10219407 12 146 1.5 2.0 1.8 4.3 221 chr3L 10219186 exon CG32055 - chr3L 10219296 exon CG32055 - chr3L 10219407 exon CG32055 - chr3L_12_10215001 chr3L_10215001 RAL-371_125b 1478 chr3L 10248933 10249130 chr3L 10249054 10249257 7 126 0.5 0.0 0.2 5.8 324 chr3L 10248933 intergenic CR44540 - chr3L 10249095 intergenic not near genes chr3L 10249257 intergenic not near genes chr3L_7_10245001 chr3L_10245001 RAL-371_125b 1479 chr3L 10250317 10250350 chr3L 10250458 10250491 5 141 0.0 6.0 3.0 1.2 174 chr3L 10250317 intergenic not near genes chr3L 10250404 intergenic not near genes chr3L 10250491 intergenic not near genes chr3L_5_10250001 chr3L_10250001 RAL-371_125b 1480 chr3L 10308702 10308762 chr3L 10308829 10308873 14 122 1.0 3.5 2.2 4.4 171 chr3L 10308702 intergenic not near genes chr3L 10308788 intergenic not near genes chr3L 10308873 intergenic not near genes chr3L_14_10305001 chr3L_10305001 RAL-371_125b 1481 chr3L 10310311 10310378 chr3L 10310448 10310525 13 146 4.0 1.5 2.8 3.4 214 chr3L 10310311 intergenic not near genes chr3L 10310418 intergenic not near genes chr3L 10310525 intergenic not near genes chr3L_13_10310001 chr3L_10310001 RAL-371_125b 1482 chr3L 10328087 10328129 chr3L 10328249 10328291 10 162 3.5 3.0 3.2 2.4 204 chr3L 10328087 intergenic not near genes chr3L 10328189 intergenic not near genes chr3L 10328291 intergenic not near genes chr3L_10_10325001 chr3L_10325001 RAL-371_125b 1483 chr3L 10367502 10367520 chr3L 10367629 10367647 4 127 1.0 0.0 0.5 2.7 145 chr3L 10367502 intergenic CR44327 + chr3L 10367574 intergenic CR44327 + chr3L 10367647 intergenic CR44327 + chr3L_4_10365001 chr3L_10365001 RAL-371_125b 1484 chr3L 10376426 10376477 chr3L 10376564 10376629 5 149 4.5 2.0 3.2 1.2 203 chr3L 10376426 intergenic not near genes chr3L 10376528 intergenic not near genes chr3L 10376629 intergenic not near genes chr3L_5_10375001 chr3L_10375001 RAL-371_125b 1485 chr3L 10414895 10414951 chr3L 10417315 10417373 Doc 9 2419 3.0 2.5 2.8 2.4 2478 chr3L 10414895 intergenic CG12362 + chr3L 10416134 intergenic not near genes chr3L 10417373 intergenic not near genes chr3L_9_10415001 chr3L_10415001 RAL-371_125b 1486 chr3L 10417539 10417567 chr3L 10417660 10417687 5 120 4.5 4.0 4.2 1.0 148 chr3L 10417539 intergenic not near genes chr3L 10417613 intergenic not near genes chr3L 10417687 intergenic not near genes chr3L_5_10415001 chr3L_10415001 RAL-371_125b 1487 chr3L 10455970 10456033 chr3L 10456213 10456276 6 242 3.5 3.5 3.5 1.3 306 chr3L 10455970 intergenic not near genes chr3L 10456123 intergenic not near genes chr3L 10456276 intergenic not near genes chr3L_6_10455001 chr3L_10455001 RAL-371_125b 1488 chr3L 10584229 10584298 chr3L 10584366 10584435 12 134 3.5 2.0 2.8 3.2 206 chr3L 10584229 intron A2bp1 + chr3L 10584332 intron A2bp1 + chr3L 10584435 intron A2bp1 + chr3L_12_10580001 chr3L_10580001 RAL-371_125b 1489 chr3L 10600435 10600469 chr3L 10600567 10600601 10 131 2.5 2.5 2.5 2.9 166 chr3L 10600435 intergenic not near genes chr3L 10600518 intergenic not near genes chr3L 10600601 intergenic not near genes chr3L_10_10600001 chr3L_10600001 RAL-371_125b 1490 chr3L 10613147 10613198 chr3L 10613492 10613543 8 343 2.0 2.0 2.0 2.7 396 chr3L 10613147 intergenic not near genes chr3L 10613345 intergenic not near genes chr3L 10613543 intergenic not near genes chr3L_8_10610001 chr3L_10610001 RAL-371_125b 1491 chr3L 10621835 10621848 chr3L 10621957 10621985 4 133 1.0 3.5 2.2 1.2 150 chr3L 10621835 intergenic not near genes chr3L 10621910 intergenic not near genes chr3L 10621985 intergenic not near genes chr3L_4_10620001 chr3L_10620001 RAL-371_125b 1492 chr3L 10788614 10788641 chr3L 10788747 10788774 7 132 5.0 2.5 3.8 1.5 160 chr3L 10788614 intergenic not near genes chr3L 10788694 intergenic not near genes chr3L 10788774 intergenic not near genes chr3L_7_10785001 chr3L_10785001 RAL-371_125b 1493 chr3L 10833574 10833602 chr3L 10833714 10833729 6 138 7.5 4.0 5.8 0.9 155 chr3L 10833574 intergenic not near genes chr3L 10833652 intergenic not near genes chr3L 10833729 intergenic not near genes chr3L_6_10830001 chr3L_10830001 RAL-371_125b 1494 chr3L 10868777 10868817 chr3L 10868909 10868949 5 132 0.0 6.0 3.0 1.2 172 chr3L 10868777 intron tna + chr3L 10868863 intron tna + chr3L 10868949 intron tna + chr3L_5_10865001 chr3L_10865001 RAL-371_125b 1495 chr3L 10912498 10912534 chr3L 10912631 10912667 5 133 1.5 0.0 0.8 2.8 169 chr3L 10912498 intergenic not near genes chr3L 10912582 intergenic not near genes chr3L 10912667 intergenic not near genes chr3L_5_10910001 chr3L_10910001 RAL-371_125b 1496 chr3L 10956954 10957033 chr3L 10957080 10957141 15 123 4.5 6.5 5.5 2.3 187 chr3L 10956954 intergenic not near genes chr3L 10957048 intergenic not near genes chr3L 10957141 intergenic not near genes chr3L_15_10955001 chr3L_10955001 RAL-371_125b 1497 chr3L 11000057 11000091 chr3L 11000156 11000169 5 107 2.0 3.0 2.5 1.4 112 chr3L 11000057 intron klu - chr3L 11000113 intron klu - chr3L 11000169 intron klu - chr3L_5_11000001 chr3L_11000001 RAL-371_125b 1498 chr3L 11047291 11047356 chr3L 11047425 11047489 8 132 5.5 2.5 4.0 1.6 198 chr3L 11047291 intron CG43693 - chr3L 11047390 intron CG43693 - chr3L 11047489 intron CG43693 - chr3L_8_11045001 chr3L_11045001 RAL-371_125b 1499 chr3L 11083467 11083525 chr3L 11083615 11083673 10 148 5.0 4.5 4.8 1.7 206 chr3L 11083467 exon JIL-1 - chr3L 11083570 intron JIL-1 - chr3L 11083673 intron JIL-1 - chr3L_10_11080001 chr3L_11080001 RAL-371_125b 1500 chr3L 11085640 11085694 chr3L 11085773 11085827 11 133 5.5 3.5 4.5 2.0 187 chr3L 11085640 exon JIL-1 - chr3L 11085734 intron JIL-1 - chr3L 11085827 intron JIL-1 - chr3L_11_11085001 chr3L_11085001 RAL-371_125b 1501 chr3L 11086999 11087080 chr3L 11088855 11088919 S-element 11 1850 0.0 5.5 2.8 2.9 1920 chr3L 11086999 intron JIL-1 - chr3L 11087959 intron JIL-1 - chr3L 11088919 intron JIL-1 - chr3L_11_11085001 chr3L_11085001 RAL-371_125b 1502 chr3L 11105252 11105309 chr3L 11107013 11107065 X-element 11 1760 5.5 1.5 3.5 2.4 1813 chr3L 11105252 intergenic not near genes chr3L 11106158 intergenic not near genes chr3L 11107065 exon CG32073 - chr3L_11_11105001 chr3L_11105001 RAL-371_125b 1503 chr3L 11117117 11117156 chr3L 11117249 11117288 5 130 6.0 5.5 5.8 0.7 171 chr3L 11117117 exon fd68A - chr3L 11117202 intron fd68A - chr3L 11117288 intron fd68A - chr3L_5_11115001 chr3L_11115001 RAL-371_125b 1504 chr3L 11264426 11264488 chr3L 11271426 11271440 17.6 9 6996 3.0 1.0 2.0 3.0 7014 chr3L 11264426 intergenic not near genes chr3L 11267933 intergenic not near genes chr3L 11271440 intergenic not near genes chr3L_9_11265001 chr3L_11265001 RAL-371_125b 1505 chr3L 11329667 11329727 chr3L 11332922 11332993 jockey 7 3243 4.5 1.5 3.0 1.8 3326 chr3L 11329667 intergenic not near genes chr3L 11331330 intergenic not near genes chr3L 11332993 intergenic not near genes chr3L_7_11330001 chr3L_11330001 RAL-371_125b 1506 chr3L 11353092 11353157 chr3L 11353225 11353290 10 132 2.0 3.0 2.5 2.9 198 chr3L 11353092 intergenic not near genes chr3L 11353191 intergenic not near genes chr3L 11353290 intergenic not near genes chr3L_10_11350001 chr3L_11350001 RAL-371_125b 1507 chr3L 11397578 11397593 chr3L 11397672 11397730 4 120 3.5 1.0 2.2 1.2 152 chr3L 11397578 exon CG44362 + chr3L 11397654 exon CG44362 + chr3L 11397730 exon CG44362 + chr3L_4_11395001 chr3L_11395001 RAL-371_125b 1508 chr3L 11435518 11435578 chr3L 11435737 11435797 17 219 3.5 4.5 4.0 3.4 279 chr3L 11435518 intergenic CG6149 -,CR44548 + chr3L 11435658 5` UTR CR44548 + chr3L 11435797 5` UTR CR44548 + chr3L_17_11435001 chr3L_11435001 RAL-371_125b 1509 chr3L 11441352 11441367 chr3L 11441481 11441496 4 129 0.0 3.0 1.5 1.6 144 chr3L 11441352 intergenic not near genes chr3L 11441424 intergenic not near genes chr3L 11441496 intergenic not near genes chr3L_4_11440001 chr3L_11440001 RAL-371_125b 1510 chr3L 11475600 11475640 chr3L 11475741 11475781 5 140 0.0 3.0 1.5 2.0 181 chr3L 11475600 intergenic Vha16-2 + chr3L 11475690 intergenic Vha16-2 + chr3L 11475781 intergenic Vha16-2 + chr3L_5_11475001 chr3L_11475001 RAL-371_125b 1511 chr3L 11560738 11560810 chr3L 11560866 11560938 14 127 3.0 5.5 4.2 2.7 200 chr3L 11560738 intron Mob2 - chr3L 11560838 intron Mob2 - chr3L 11560938 intron Mob2 - chr3L_14_11560001 chr3L_11560001 RAL-371_125b 1512 chr3L 11579506 11579581 chr3L 11579662 11579737 17 155 3.0 1.5 2.2 5.3 231 chr3L 11579506 intergenic CG43390 - chr3L 11579622 intergenic CG43390 - chr3L 11579737 intergenic CG43390 - chr3L_17_11575001 chr3L_11575001 RAL-371_125b 1513 chr3L 11646275 11646323 chr3L 11646407 11646454 10 131 0.5 6.0 3.2 2.4 179 chr3L 11646275 3` UTR RIOK1 - chr3L 11646364 3` UTR RIOK1 - chr3L 11646454 exon RIOK1 - chr3L_10_11645001 chr3L_11645001 RAL-371_125b 1514 chr3L 11653790 11653850 chr3L 11653922 11653982 9 127 4.5 4.5 4.5 1.6 192 chr3L 11653790 intron CG32085 - chr3L 11653886 intron CG32085 - chr3L 11653982 exon CG32085 - chr3L_9_11650001 chr3L_11650001 RAL-371_125b 1515 chr3L 11663704 11663728 chr3L 11663879 11663903 6 173 10.0 1.5 5.8 0.9 199 chr3L 11663704 intron CG32085 - chr3L 11663804 intron CG32085 - chr3L 11663903 intron CG32085 - chr3L_6_11660001 chr3L_11660001 RAL-371_125b 1516 chr3L 11664480 11664502 chr3L 11664647 11664656 4 164 8.0 0.0 4.0 0.8 176 chr3L 11664480 intron CG32085 - chr3L 11664568 intron CG32085 - chr3L 11664656 intron CG32085 - chr3L_4_11660001 chr3L_11660001 RAL-371_125b 1517 chr3L 11723047 11723107 chr3L 11727896 11727956 Doc 12 4849 3.5 1.5 2.5 3.4 4909 chr3L 11723047 3` UTR Bmcp + chr3L 11725502 intron Bmcp + chr3L 11727956 3` UTR Bmcp + chr3L_12_11725001 chr3L_11725001 RAL-371_125b 1518 chr3L 11743974 11744045 chr3L 11744132 11744203 10 157 4.5 0.5 2.5 2.9 229 chr3L 11743974 exon CG6024 - chr3L 11744088 intron CG6024 - chr3L 11744203 intron CG6024 - chr3L_10_11740001 chr3L_11740001 RAL-371_125b 1519 chr3L 11755142 11755183 chr3L 11755271 11755293 8 125 4.0 4.0 4.0 1.6 151 chr3L 11755142 intron CG6024 - chr3L 11755218 intron CG6024 - chr3L 11755293 intron CG6024 - chr3L_8_11755001 chr3L_11755001 RAL-371_125b 1520 chr3L 11864514 11864544 chr3L 11865859 11865889 pogo 10 1342 7.0 3.0 5.0 1.7 1375 chr3L 11864514 intron CG44837 - chr3L 11865202 intron CG44837 - chr3L 11865889 intron CG44837 - chr3L_10_11865001 chr3L_11865001 RAL-371_125b 1521 chr3L 11864545 11864580 chr3L 11865857 11865925 pogo 8 1337 3.5 3.0 3.2 1.9 1380 chr3L 11864545 intron CG44837 - chr3L 11865235 intron CG44837 - chr3L 11865925 intron CG44837 - chr3L_8_11865001 chr3L_11865001 RAL-371_125b 1522 chr3L 11905073 11905143 chr3L 11905205 11905275 19 132 5.5 3.5 4.5 3.5 202 chr3L 11905073 intron CG44837 - chr3L 11905174 intron CG44837 - chr3L 11905275 intron CG44837 - chr3L_19_11905001 chr3L_11905001 RAL-371_125b 1523 chr3L 11910307 11910370 chr3L 11910442 11910503 6 132 0.0 2.5 1.2 2.7 196 chr3L 11910307 intron CG44837 - chr3L 11910405 intron CG44837 - chr3L 11910503 intron CG44837 - chr3L_6_11910001 chr3L_11910001 RAL-371_125b 1524 chr3L 12013866 12013936 chr3L 12014007 12014077 17 139 4.0 2.0 3.0 4.2 211 chr3L 12013866 intron rols - chr3L 12013972 intron rols - chr3L 12014077 intron rols - chr3L_17_12010001 chr3L_12010001 RAL-371_125b 1525 chr3L 12034860 12034902 chr3L 12034976 12035029 7 125 5.0 2.5 3.8 1.5 169 chr3L 12034860 intron rols - chr3L 12034944 intron rols - chr3L 12035029 intron rols - chr3L_7_12030001 chr3L_12030001 RAL-371_125b 1526 chr3L 12052668 12052729 chr3L 12052807 12052868 10 139 3.0 6.5 4.8 1.7 200 chr3L 12052668 intron rols - chr3L 12052768 intron rols - chr3L 12052868 intron rols - chr3L_10_12050001 chr3L_12050001 RAL-371_125b 1527 chr3L 12075396 12075458 chr3L 12075515 12075592 8 133 2.5 0.0 1.2 3.6 196 chr3L 12075396 intron Sema-5c - chr3L 12075494 intron Sema-5c - chr3L 12075592 intron Sema-5c - chr3L_8_12075001 chr3L_12075001 RAL-371_125b 1528 chr3L 12089035 12089105 chr3L 12089165 12089235 12 130 2.0 3.0 2.5 3.4 200 chr3L 12089035 exon CG17154 + chr3L 12089135 3` UTR CG17154 + chr3L 12089235 intergenic CG17154 + chr3L_12_12085001 chr3L_12085001 RAL-371_125b 1529 chr3L 12092346 12092399 chr3L 12092473 12092526 5 127 3.0 2.0 2.5 1.4 180 chr3L 12092346 intergenic not near genes chr3L 12092436 intergenic not near genes chr3L 12092526 intergenic not near genes chr3L_5_12090001 chr3L_12090001 RAL-371_125b 1530 chr3L 12114838 12114847 chr3L 12114969 12114978 4 131 2.0 3.0 2.5 1.1 140 chr3L 12114838 intergenic not near genes chr3L 12114908 intergenic not near genes chr3L 12114978 intergenic not near genes chr3L_4_12110001 chr3L_12110001 RAL-371_125b 1531 chr3L 12186371 12186399 chr3L 12186537 12186565 6 166 3.0 6.5 4.8 1.0 194 chr3L 12186371 intron CG6910 + chr3L 12186468 intron CG6910 + chr3L 12186565 exon CG6910 + chr3L_6_12185001 chr3L_12185001 RAL-371_125b 1532 chr3L 12300810 12300867 chr3L 12300999 12301056 8 189 7.5 6.0 6.8 1.0 246 chr3L 12300810 intergenic CR44550 + chr3L 12300933 intergenic CR44550 + chr3L 12301056 5` UTR CR44550 + chr3L_8_12300001 chr3L_12300001 RAL-371_125b 1533 chr3L 12304056 12304110 chr3L 12304182 12304236 9 124 3.0 6.0 4.5 1.6 180 chr3L 12304056 intergenic not near genes chr3L 12304146 intergenic not near genes chr3L 12304236 intergenic not near genes chr3L_9_12300001 chr3L_12300001 RAL-371_125b 1534 chr3L 12335334 12335415 chr3L 12335463 12335518 12 114 3.5 4.0 3.8 2.5 184 chr3L 12335334 exon CG32105 + chr3L 12335426 3` UTR CG32105 + chr3L 12335518 3` UTR CG32105 + chr3L_12_12335001 chr3L_12335001 RAL-371_125b 1535 chr3L 12353883 12353934 chr3L 12354022 12354067 7 136 3.5 4.5 4.0 1.4 184 chr3L 12353883 intergenic not near genes chr3L 12353975 intergenic not near genes chr3L 12354067 intergenic not near genes chr3L_7_12350001 chr3L_12350001 RAL-371_125b 1536 chr3L 12365356 12365363 chr3L 12365899 12365906 4 542 5.0 4.0 4.5 0.7 550 chr3L 12365356 intergenic not near genes chr3L 12365631 intergenic not near genes chr3L 12365906 intergenic not near genes chr3L_4_12365001 chr3L_12365001 RAL-371_125b 1537 chr3L 12365365 12365378 chr3L 12365890 12365918 4 536 3.5 2.5 3.0 1.0 553 chr3L 12365365 intergenic not near genes chr3L 12365642 intergenic not near genes chr3L 12365918 intergenic not near genes chr3L_4_12365001 chr3L_12365001 RAL-371_125b 1538 chr3L 12369487 12369564 chr3L 12369627 12369704 13 140 1.5 1.5 1.5 5.2 217 chr3L 12369487 intron Ncc69 - chr3L 12369596 intron Ncc69 - chr3L 12369704 intron Ncc69 - chr3L_13_12365001 chr3L_12365001 RAL-371_125b 1539 chr3L 12446220 12446289 chr3L 12446348 12446407 11 113 4.0 2.5 3.2 2.6 187 chr3L 12446220 intergenic not near genes chr3L 12446314 intergenic not near genes chr3L 12446407 intergenic not near genes chr3L_11_12445001 chr3L_12445001 RAL-371_125b 1540 chr3L 12453707 12453771 chr3L 12453879 12453943 17 172 3.0 3.5 3.2 4.0 236 chr3L 12453707 intergenic not near genes chr3L 12453825 intergenic not near genes chr3L 12453943 intergenic not near genes chr3L_17_12450001 chr3L_12450001 RAL-371_125b 1541 chr3L 12578043 12578055 chr3L 12578181 12578193 4 138 3.5 0.0 1.8 1.4 150 chr3L 12578043 intergenic not near genes chr3L 12578118 intergenic not near genes chr3L 12578193 intergenic not near genes chr3L_4_12575001 chr3L_12575001 RAL-371_125b 1542 chr3L 12610951 12611021 chr3L 12611247 12611317 11 296 0.5 1.5 1.0 5.5 366 chr3L 12610951 intron caup + chr3L 12611134 intron caup + chr3L 12611317 intron caup + chr3L_11_12610001 chr3L_12610001 RAL-371_125b 1543 chr3L 12639553 12639619 chr3L 12639771 12639797 14 200 3.5 4.0 3.8 2.9 244 chr3L 12639553 intron CR32111 + chr3L 12639675 intron CR32111 + chr3L 12639797 intron CR32111 + chr3L_14_12635001 chr3L_12635001 RAL-371_125b 1544 chr3L 12675137 12675141 chr3L 12675256 12675268 5 124 4.0 7.0 5.5 0.8 131 chr3L 12675137 intergenic not near genes chr3L 12675202 intergenic not near genes chr3L 12675268 intergenic not near genes chr3L_5_12675001 chr3L_12675001 RAL-371_125b 1545 chr3L 12706594 12706651 chr3L 12706771 12706828 14 176 6.0 2.5 4.2 2.7 234 chr3L 12706594 intron mirr + chr3L 12706711 intron mirr + chr3L 12706828 intron mirr + chr3L_14_12705001 chr3L_12705001 RAL-371_125b 1546 chr3L 12727986 12728043 chr3L 12728120 12728177 8 134 2.0 5.0 3.5 1.8 191 chr3L 12727986 intergenic not near genes chr3L 12728082 intergenic not near genes chr3L 12728177 intergenic not near genes chr3L_8_12725001 chr3L_12725001 RAL-371_125b 1547 chr3L 12801935 12802011 chr3L 12802061 12802122 16 124 3.5 2.5 3.0 4.0 187 chr3L 12801935 intron Atg1 - chr3L 12802028 intron Atg1 - chr3L 12802122 intron Atg1 - chr3L_16_12800001 chr3L_12800001 RAL-371_125b 1548 chr3L 12832031 12832100 chr3L 12832172 12832241 10 140 3.5 3.0 3.2 2.4 210 chr3L 12832031 intron CG10960 - chr3L 12832136 intron CG10960 - chr3L 12832241 intron CG10960 - chr3L_10_12830001 chr3L_12830001 RAL-371_125b 1549 chr3L 12874897 12874938 chr3L 12877239 12877280 jockey 10 2342 3.0 5.0 4.0 2.0 2383 chr3L 12874897 intergenic not near genes chr3L 12876088 intergenic not near genes chr3L 12877280 intergenic not near genes chr3L_10_12875001 chr3L_12875001 RAL-371_125b 1550 chr3L 12894771 12894807 chr3L 12894899 12894929 9 127 3.0 6.0 4.5 1.6 158 chr3L 12894771 intergenic CG14118 + chr3L 12894850 intergenic CG14118 + chr3L 12894929 intergenic CG14118 + chr3L_9_12890001 chr3L_12890001 RAL-371_125b 1551 chr3L 12919261 12919309 chr3L 12924751 12924837 Rt1c 7 5498 2.0 3.5 2.8 1.8 5576 chr3L 12919261 intergenic not near genes chr3L 12922049 intergenic not near genes chr3L 12924837 intergenic not near genes chr3L_7_12920001 chr3L_12920001 RAL-371_125b 1552 chr3L 12943824 12943847 chr3L 12943965 12943988 5 141 6.0 0.0 3.0 1.2 164 chr3L 12943824 intergenic not near genes chr3L 12943906 intergenic not near genes chr3L 12943988 intergenic not near genes chr3L_5_12940001 chr3L_12940001 RAL-371_125b 1553 chr3L 12957742 12957803 chr3L 12962274 12962320 copia 11 4527 5.0 4.0 4.5 2.0 4578 chr3L 12957742 intergenic not near genes chr3L 12960031 intergenic not near genes chr3L 12962320 intergenic not near genes chr3L_11_12960001 chr3L_12960001 RAL-371_125b 1554 chr3L 12966948 12967003 chr3L 12967609 12967683 14 678 8.0 4.0 6.0 2.0 735 chr3L 12966948 exon Or69a - chr3L 12967316 exon Or69a - chr3L 12967683 exon Or69a - chr3L_14_12965001 chr3L_12965001 RAL-371_125b 1555 chr3L 13050136 13050141 chr3L 13050406 13050411 4 270 7.5 4.5 6.0 0.6 275 chr3L 13050136 intergenic not near genes chr3L 13050274 intergenic not near genes chr3L 13050411 intergenic not near genes chr3L_4_13050001 chr3L_13050001 RAL-371_125b 1556 chr3L 13144081 13144141 chr3L 13144208 13144266 11 125 1.5 2.0 1.8 3.9 185 chr3L 13144081 intergenic not near genes chr3L 13144174 intergenic not near genes chr3L 13144266 intergenic not near genes chr3L_11_13140001 chr3L_13140001 RAL-371_125b 1557 chr3L 13206190 13206220 chr3L 13206322 13206352 6 132 7.0 4.5 5.8 0.9 162 chr3L 13206190 intergenic not near genes chr3L 13206271 intergenic not near genes chr3L 13206352 intergenic not near genes chr3L_6_13205001 chr3L_13205001 RAL-371_125b 1558 chr3L 13206226 13206258 chr3L 13206317 13206390 4 122 3.0 4.0 3.5 0.9 164 chr3L 13206226 intergenic not near genes chr3L 13206308 intergenic not near genes chr3L 13206390 intergenic not near genes chr3L_4_13205001 chr3L_13205001 RAL-371_125b 1559 chr3L 13235735 13235752 chr3L 13235873 13235889 5 137 5.0 6.5 5.8 0.7 154 chr3L 13235735 intron caps + chr3L 13235812 intron caps + chr3L 13235889 intron caps + chr3L_5_13235001 chr3L_13235001 RAL-371_125b 1560 chr3L 13270522 13270573 chr3L 13270728 13270778 9 205 2.5 3.0 2.8 2.4 256 chr3L 13270522 intron caps + chr3L 13270650 intron caps + chr3L 13270778 intron caps + chr3L_9_13270001 chr3L_13270001 RAL-371_125b 1561 chr3L 13296475 13296540 chr3L 13296616 13296681 21 141 4.0 4.0 4.0 4.2 206 chr3L 13296475 intergenic Sfp70A4 - chr3L 13296578 3` UTR Sfp70A4 - chr3L 13296681 3` UTR Sfp70A4 - chr3L_21_13295001 chr3L_13295001 RAL-371_125b 1562 chr3L 13314562 13314610 chr3L 13314695 13314743 4 133 3.5 2.0 2.8 1.1 181 chr3L 13314562 intergenic not near genes chr3L 13314652 intergenic not near genes chr3L 13314743 intergenic not near genes chr3L_4_13310001 chr3L_13310001 RAL-371_125b 1563 chr3L 13315808 13315862 chr3L 13315945 13315999 7 137 3.0 0.0 1.5 2.8 191 chr3L 13315808 intergenic not near genes chr3L 13315904 intergenic not near genes chr3L 13315999 intergenic not near genes chr3L_7_13315001 chr3L_13315001 RAL-371_125b 1564 chr3L 13317752 13317815 chr3L 13317892 13317955 13 140 0.0 3.5 1.8 4.6 203 chr3L 13317752 intergenic not near genes chr3L 13317854 intergenic not near genes chr3L 13317955 intergenic not near genes chr3L_13_13315001 chr3L_13315001 RAL-371_125b 1565 chr3L 13337136 13337157 chr3L 13337277 13337298 6 141 2.0 4.5 3.2 1.4 162 chr3L 13337136 intergenic not near genes chr3L 13337217 intergenic not near genes chr3L 13337298 intergenic not near genes chr3L_6_13335001 chr3L_13335001 RAL-371_125b 1566 chr3L 13361738 13361796 chr3L 13361870 13361933 11 136 3.0 8.0 5.5 1.7 195 chr3L 13361738 intergenic not near genes chr3L 13361836 intergenic not near genes chr3L 13361933 intergenic not near genes chr3L_11_13360001 chr3L_13360001 RAL-371_125b 1567 chr3L 13400479 13400493 chr3L 13400605 13400619 4 126 6.5 2.0 4.2 0.8 140 chr3L 13400479 intron sens - chr3L 13400549 intron sens - chr3L 13400619 intron sens - chr3L_4_13400001 chr3L_13400001 RAL-371_125b 1568 chr3L 13426926 13426980 chr3L 13429349 13429404 8 2423 7.5 16.5 12.0 0.6 2478 chr3L 13426926 intergenic CG14105 - chr3L 13428165 intergenic not near genes chr3L 13429404 3` UTR CG10713 - chr3L_8_13425001 chr3L_13425001 RAL-371_125b 1569 chr3L 13525121 13525169 chr3L 13532963 13533015 roo 9 7846 5.0 7.5 6.2 1.2 7894 chr3L 13525121 intergenic not near genes chr3L 13529068 intergenic not near genes chr3L 13533015 intergenic not near genes chr3L_9_13525001 chr3L_13525001 RAL-371_125b 1570 chr3L 13677500 13677546 chr3L 13677627 13677673 8 127 2.5 3.0 2.8 2.1 173 chr3L 13677500 intron bru-3 - chr3L 13677586 intron bru-3 - chr3L 13677673 intron bru-3 - chr3L_8_13675001 chr3L_13675001 RAL-371_125b 1571 chr3L 13804504 13804563 chr3L 13822840 13822899 roo 13 18336 6.0 4.0 5.0 2.2 18395 chr3L 13804504 intergenic not near genes chr3L 13813702 intergenic not near genes chr3L 13822899 intergenic not near genes chr3L_13_13810001 chr3L_13810001 RAL-371_125b 1572 chr3L 13841471 13841483 chr3L 13841605 13841617 4 134 9.0 2.0 5.5 0.6 146 chr3L 13841471 exon CG8757 - chr3L 13841544 intron CG8757 - chr3L 13841617 intron CG8757 - chr3L_4_13840001 chr3L_13840001 RAL-371_125b 1573 chr3L 13841488 13841536 chr3L 13841600 13841659 13 122 5.5 2.5 4.0 2.6 171 chr3L 13841488 exon CG8757 - chr3L 13841574 intron CG8757 - chr3L 13841659 exon CG8757 - chr3L_13_13840001 chr3L_13840001 RAL-371_125b 1574 chr3L 13884335 13884384 chr3L 13884476 13884523 10 141 3.0 3.0 3.0 2.5 188 chr3L 13884335 intron dysc - chr3L 13884429 intron dysc - chr3L 13884523 intron dysc - chr3L_10_13880001 chr3L_13880001 RAL-371_125b 1575 chr3L 13920382 13920431 chr3L 13920512 13920561 11 130 1.5 2.0 1.8 3.9 179 chr3L 13920382 intron Rgl - chr3L 13920472 intron Rgl - chr3L 13920561 intron Rgl - chr3L_11_13920001 chr3L_13920001 RAL-371_125b 1576 chr3L 13957838 13957905 chr3L 13958081 13958148 9 241 3.0 3.5 3.2 2.1 310 chr3L 13957838 intron CG32137 + chr3L 13957993 intron CG32137 + chr3L 13958148 intron CG32137 + chr3L_9_13955001 chr3L_13955001 RAL-371_125b 1577 chr3L 14168362 14168384 chr3L 14168575 14168597 5 213 0.0 2.5 1.2 2.3 235 chr3L 14168362 intergenic not near genes chr3L 14168480 intergenic not near genes chr3L 14168597 intergenic not near genes chr3L_5_14165001 chr3L_14165001 RAL-371_125b 1578 chr3L 14194675 14194732 chr3L 14194801 14194858 12 126 3.5 1.0 2.2 3.8 183 chr3L 14194675 intron nuf + chr3L 14194766 intron nuf + chr3L 14194858 intron nuf + chr3L_12_14190001 chr3L_14190001 RAL-371_125b 1579 chr3L 14214364 14214423 chr3L 14214502 14214561 8 136 2.5 6.0 4.2 1.5 197 chr3L 14214364 intron nuf + chr3L 14214462 intron nuf + chr3L 14214561 intron nuf + chr3L_8_14210001 chr3L_14210001 RAL-371_125b 1580 chr3L 14236007 14236072 chr3L 14236194 14236223 9 183 3.0 3.0 3.0 2.2 216 chr3L 14236007 intergenic CG34244 - chr3L 14236115 intergenic CG34244 - chr3L 14236223 intergenic CG34244 -,CG7906 + chr3L_9_14235001 chr3L_14235001 RAL-371_125b 1581 chr3L 14239940 14239997 chr3L 14240087 14240124 9 144 3.5 2.5 3.0 2.2 184 chr3L 14239940 intergenic CR45399 - chr3L 14240032 intergenic not near genes chr3L 14240124 intergenic not near genes chr3L_9_14240001 chr3L_14240001 RAL-371_125b 1582 chr3L 14267329 14267367 chr3L 14271819 14271857 F-element 7 4488 4.5 4.5 4.5 1.3 4528 chr3L 14267329 intergenic not near genes chr3L 14269593 intergenic not near genes chr3L 14271857 intergenic not near genes chr3L_7_14265001 chr3L_14265001 RAL-371_125b 1583 chr3L 14287027 14287081 chr3L 14287156 14287210 5 129 4.5 0.0 2.2 1.6 183 chr3L 14287027 intron fz + chr3L 14287118 intron fz + chr3L 14287210 intron fz + chr3L_5_14285001 chr3L_14285001 RAL-371_125b 1584 chr3L 14295938 14296001 chr3L 14296474 14296537 roo 10 534 2.5 7.0 4.8 1.7 599 chr3L 14295938 intron fz + chr3L 14296238 intron fz + chr3L 14296537 intron fz + chr3L_10_14295001 chr3L_14295001 RAL-371_125b 1585 chr3L 14326921 14326979 chr3L 14327107 14327165 11 186 2.0 1.0 1.5 4.4 244 chr3L 14326921 intron fz + chr3L 14327043 intron fz + chr3L 14327165 intron fz + chr3L_11_14325001 chr3L_14325001 RAL-371_125b 1586 chr3L 14341398 14341439 chr3L 14341583 14341623 7 185 0.0 6.0 3.0 1.8 225 chr3L 14341398 intron fz + chr3L 14341510 intron fz + chr3L 14341623 intron fz + chr3L_7_14340001 chr3L_14340001 RAL-371_125b 1587 chr3L 14385092 14385111 chr3L 14385230 14385244 7 137 3.5 5.5 4.5 1.3 152 chr3L 14385092 intergenic not near genes chr3L 14385168 intergenic not near genes chr3L 14385244 intergenic not near genes chr3L_7_14385001 chr3L_14385001 RAL-371_125b 1588 chr3L 14462835 14462905 chr3L 14462973 14463033 10 137 2.5 2.0 2.2 3.1 198 chr3L 14462835 intron bbg - chr3L 14462934 intron bbg - chr3L 14463033 intron bbg - chr3L_10_14460001 chr3L_14460001 RAL-371_125b 1589 chr3L 14468407 14468456 chr3L 14473663 14473712 copia 14 5256 4.5 3.5 4.0 2.8 5305 chr3L 14468407 intron bbg - chr3L 14471060 intron bbg - chr3L 14473712 intron bbg - chr3L_14_14470001 chr3L_14470001 RAL-371_125b 1590 chr3L 14522079 14522114 chr3L 14522228 14522263 8 149 3.5 5.0 4.2 1.5 184 chr3L 14522079 intron bbg - chr3L 14522171 intron bbg - chr3L 14522263 intron bbg - chr3L_8_14520001 chr3L_14520001 RAL-371_125b 1591 chr3L 14605594 14605644 chr3L 14605746 14605789 5 151 0.0 2.5 1.2 2.3 195 chr3L 14605594 intergenic not near genes chr3L 14605692 intergenic not near genes chr3L 14605789 intergenic not near genes chr3L_5_14605001 chr3L_14605001 RAL-371_125b 1592 chr3L 14715690 14715726 chr3L 14715828 14715864 5 138 3.0 2.0 2.5 1.4 174 chr3L 14715690 intron ome + chr3L 14715777 intron ome + chr3L 14715864 intron ome + chr3L_5_14715001 chr3L_14715001 RAL-371_125b 1593 chr3L 14721161 14721209 chr3L 14723044 14723045 Rt1c 7 1881 5.5 5.5 5.5 1.1 1884 chr3L 14721161 intron ome + chr3L 14722103 intron ome + chr3L 14723045 intron ome + chr3L_7_14720001 chr3L_14720001 RAL-371_125b 1594 chr3L 14835502 14835563 chr3L 14835703 14835764 14 198 4.5 3.0 3.8 2.9 262 chr3L 14835502 intron CG17839 + chr3L 14835633 intron CG17839 + chr3L 14835764 intron CG17839 + chr3L_14_14835001 chr3L_14835001 RAL-371_125b 1595 chr3L 14839001 14839017 chr3L 14839130 14839156 5 137 3.5 1.0 2.2 1.6 155 chr3L 14839001 intron CG17839 + chr3L 14839078 intron CG17839 + chr3L 14839156 intron CG17839 + chr3L_5_14835001 chr3L_14835001 RAL-371_125b 1596 chr3L 14861771 14861827 chr3L 14861901 14861956 9 129 4.0 6.0 5.0 1.5 185 chr3L 14861771 intron CG17839 + chr3L 14861864 intron CG17839 + chr3L 14861956 intron CG17839 + chr3L_9_14860001 chr3L_14860001 RAL-371_125b 1597 chr3L 14892408 14892476 chr3L 14892535 14892603 9 126 4.5 3.0 3.8 1.9 195 chr3L 14892408 intergenic not near genes chr3L 14892506 intergenic not near genes chr3L 14892603 intergenic not near genes chr3L_9_14890001 chr3L_14890001 RAL-371_125b 1598 chr3L 14892914 14892956 chr3L 14893030 14893085 9 124 6.5 1.5 4.0 1.8 171 chr3L 14892914 intergenic not near genes chr3L 14893000 intergenic not near genes chr3L 14893085 intergenic not near genes chr3L_9_14890001 chr3L_14890001 RAL-371_125b 1599 chr3L 14917624 14917678 chr3L 14917749 14917811 11 131 6.0 3.5 4.8 1.9 187 chr3L 14917624 intron DCX-EMAP + chr3L 14917718 intron DCX-EMAP + chr3L 14917811 intron DCX-EMAP + chr3L_11_14915001 chr3L_14915001 RAL-371_125b 1600 chr3L 14933396 14933451 chr3L 14933528 14933583 7 132 4.5 4.5 4.5 1.3 187 chr3L 14933396 intron DCX-EMAP + chr3L 14933490 intron DCX-EMAP + chr3L 14933583 intron DCX-EMAP + chr3L_7_14930001 chr3L_14930001 RAL-371_125b 1601 chr3L 14970720 14970748 chr3L 14971080 14971108 F-element 5 360 3.5 1.5 2.5 1.4 388 chr3L 14970720 intergenic Tom + chr3L 14970914 intergenic not near genes chr3L 14971108 intergenic not near genes chr3L_5_14970001 chr3L_14970001 RAL-371_125b 1602 chr3L 15035120 15035179 chr3L 15038030 15038089 12 2907 2.5 3.5 3.0 3.0 2969 chr3L 15035120 intron Sytbeta - chr3L 15036604 intron Sytbeta - chr3L 15038089 intron Sytbeta - chr3L_12_15035001 chr3L_15035001 RAL-371_125b 1603 chr3L 15048131 15048186 chr3L 15048445 15048500 10 314 16.0 19.5 17.8 0.5 369 chr3L 15048131 intron Sytbeta - chr3L 15048316 intron Sytbeta - chr3L 15048500 intron Sytbeta - chr3L_10_15045001 chr3L_15045001 RAL-371_125b 1604 chr3L 15069796 15069809 chr3L 15069984 15069995 4 194 13.0 14.0 13.5 0.3 199 chr3L 15069796 exon cp309 - chr3L 15069896 intron cp309 - chr3L 15069995 exon cp309 - chr3L_4_15065001 chr3L_15065001 RAL-371_125b 1605 chr3L 15070050 15070110 chr3L 15070324 15070372 4 263 20.0 25.0 22.5 0.2 322 chr3L 15070050 exon cp309 - chr3L 15070211 exon cp309 - chr3L 15070372 exon cp309 - chr3L_4_15070001 chr3L_15070001 RAL-371_125b 1606 chr3L 15085007 15085081 chr3L 15086223 15086294 1360 15 1215 2.5 3.0 2.8 3.9 1287 chr3L 15085007 intron cp309 - chr3L 15085650 intron cp309 - chr3L 15086294 intron cp309 - chr3L_15_15085001 chr3L_15085001 RAL-371_125b 1607 chr3L 15094931 15094953 chr3L 15095077 15095099 4 146 1.5 3.0 2.2 1.2 168 chr3L 15094931 intergenic cp309 -,Aats-gly +,CG6945 - chr3L 15095015 intergenic Aats-gly +,cp309 -,CG6945 - chr3L 15095099 intergenic Aats-gly +,cp309 -,CG6945 - chr3L_4_15095001 chr3L_15095001 RAL-371_125b 1608 chr3L 15146133 15146141 chr3L 15146260 15146268 4 127 0.0 2.5 1.2 1.8 135 chr3L 15146133 3` UTR Pex3 + chr3L 15146200 3` UTR Pex3 + chr3L 15146268 3` UTR Pex3 + chr3L_4_15145001 chr3L_15145001 RAL-371_125b 1609 chr3L 15193649 15193721 chr3L 15193868 15193930 11 218 1.5 2.5 2.0 3.7 281 chr3L 15193649 intergenic not near genes chr3L 15193790 intergenic not near genes chr3L 15193930 intergenic not near genes chr3L_11_15190001 chr3L_15190001 RAL-371_125b 1610 chr3L 15208572 15208643 chr3L 15208905 15208977 12 333 7.5 2.5 5.0 2.0 405 chr3L 15208572 3` UTR CG6888 + chr3L 15208774 intergenic CG6888 + chr3L 15208977 intergenic CG6888 + chr3L_12_15205001 chr3L_15205001 RAL-371_125b 1611 chr3L 15257389 15257445 chr3L 15257652 15257708 10 262 1.5 0.5 1.0 5.0 319 chr3L 15257389 intergenic not near genes chr3L 15257548 intergenic not near genes chr3L 15257708 intergenic not near genes chr3L_10_15255001 chr3L_15255001 RAL-371_125b 1612 chr3L 15295754 15295792 chr3L 15298647 15298685 gypsy5 7 2893 4.0 4.5 4.2 1.3 2931 chr3L 15295754 intergenic not near genes chr3L 15297220 intergenic not near genes chr3L 15298685 intergenic Best4 + chr3L_7_15295001 chr3L_15295001 RAL-371_125b 1613 chr3L 15333087 15333145 chr3L 15333219 15333274 7 129 3.0 1.5 2.2 2.2 187 chr3L 15333087 intergenic CR43247 + chr3L 15333180 intergenic CR43247 + chr3L 15333274 intergenic CR43247 + chr3L_7_15330001 chr3L_15330001 RAL-371_125b 1614 chr3L 15384915 15384983 chr3L 15385093 15385126 13 172 3.5 5.5 4.5 2.4 211 chr3L 15384915 intergenic not near genes chr3L 15385020 intergenic not near genes chr3L 15385126 intergenic not near genes chr3L_13_15385001 chr3L_15385001 RAL-371_125b 1615 chr3L 15405976 15406045 chr3L 15406108 15406178 9 127 1.0 3.5 2.2 2.8 202 chr3L 15405976 intergenic not near genes chr3L 15406077 intergenic not near genes chr3L 15406178 intergenic not near genes chr3L_9_15405001 chr3L_15405001 RAL-371_125b 1616 chr3L 15423716 15423770 chr3L 15426610 15426664 opus 7 2893 4.5 1.0 2.8 1.8 2948 chr3L 15423716 intergenic not near genes chr3L 15425190 intergenic not near genes chr3L 15426664 intergenic not near genes chr3L_7_15425001 chr3L_15425001 RAL-371_125b 1617 chr3L 15443542 15443614 chr3L 15443668 15443741 11 127 1.0 2.0 1.5 4.4 199 chr3L 15443542 intergenic not near genes chr3L 15443642 intergenic not near genes chr3L 15443741 intergenic not near genes chr3L_11_15440001 chr3L_15440001 RAL-371_125b 1618 chr3L 15463421 15463480 chr3L 15463561 15463620 5 140 3.5 3.0 3.2 1.2 199 chr3L 15463421 intergenic not near genes chr3L 15463520 intergenic not near genes chr3L 15463620 intergenic not near genes chr3L_5_15460001 chr3L_15460001 RAL-371_125b 1619 chr3L 15465987 15466134 chr3L 15466119 15466280 13 140 0.0 0.0 0.0 13.0 293 chr3L 15465987 intergenic not near genes chr3L 15466134 intergenic not near genes chr3L 15466280 intergenic not near genes chr3L_13_15465001 chr3L_15465001 RAL-371_125b 1620 chr3L 15466471 15466542 chr3L 15466605 15466675 8 134 3.5 1.0 2.2 2.5 204 chr3L 15466471 intergenic not near genes chr3L 15466573 intergenic not near genes chr3L 15466675 intergenic not near genes chr3L_8_15465001 chr3L_15465001 RAL-371_125b 1621 chr3L 15482557 15482623 chr3L 15482688 15482754 8 131 1.0 4.5 2.8 2.1 197 chr3L 15482557 intergenic not near genes chr3L 15482656 intergenic not near genes chr3L 15482754 intergenic not near genes chr3L_8_15480001 chr3L_15480001 RAL-371_125b 1622 chr3L 15493322 15493333 chr3L 15493467 15493478 4 145 3.5 3.0 3.2 1.0 156 chr3L 15493322 exon CG12355 - chr3L 15493400 intron CG12355 - chr3L 15493478 5` UTR CG12355 - chr3L_4_15490001 chr3L_15490001 RAL-371_125b 1623 chr3L 15501476 15501534 chr3L 15501641 15501705 9 168 7.0 3.0 5.0 1.5 229 chr3L 15501476 intron CG7272 + chr3L 15501590 intron CG7272 + chr3L 15501705 intron CG7272 + chr3L_9_15500001 chr3L_15500001 RAL-371_125b 1624 chr3L 15511255 15511314 chr3L 15511385 15511444 4 129 1.5 3.5 2.5 1.1 189 chr3L 15511255 intron Eip71CD + chr3L 15511350 intron Eip71CD + chr3L 15511444 intron Eip71CD + chr3L_4_15510001 chr3L_15510001 RAL-371_125b 1625 chr3L 15541590 15541645 chr3L 15541714 15541786 8 139 5.5 1.5 3.5 1.8 196 chr3L 15541590 intron CrebA + chr3L 15541688 intron CrebA + chr3L 15541786 intron CrebA + chr3L_8_15540001 chr3L_15540001 RAL-371_125b 1626 chr3L 15541915 15541964 chr3L 15542053 15542108 6 143 1.0 3.0 2.0 2.0 193 chr3L 15541915 intron CrebA + chr3L 15542012 intron CrebA + chr3L 15542108 intron CrebA + chr3L_6_15540001 chr3L_15540001 RAL-371_125b 1627 chr3L 15641734 15641814 chr3L 15641869 15641949 7 135 0.0 3.0 1.5 2.8 215 chr3L 15641734 intron comm3 - chr3L 15641842 intron comm3 - chr3L 15641949 intron comm3 - chr3L_7_15640001 chr3L_15640001 RAL-371_125b 1628 chr3L 15737332 15737382 chr3L 15737472 15737522 7 140 3.5 3.5 3.5 1.6 190 chr3L 15737332 intergenic not near genes chr3L 15737427 intergenic not near genes chr3L 15737522 intergenic not near genes chr3L_7_15735001 chr3L_15735001 RAL-371_125b 1629 chr3L 15744580 15744635 chr3L 15745004 15745069 18 430 19.0 15.5 17.2 1.0 489 chr3L 15744580 intergenic not near genes chr3L 15744824 intergenic not near genes chr3L 15745069 intergenic not near genes chr3L_18_15740001 chr3L_15740001 RAL-371_125b 1630 chr3L 15770287 15770325 chr3L 15770594 15770633 10 305 0.5 3.0 1.8 3.6 346 chr3L 15770287 intergenic not near genes chr3L 15770460 intergenic not near genes chr3L 15770633 intergenic not near genes chr3L_10_15770001 chr3L_15770001 RAL-371_125b 1631 chr3L 15832216 15832274 chr3L 15832347 15832404 14 131 4.5 3.0 3.8 2.9 188 chr3L 15832216 intergenic dbo +,CG12713 + chr3L 15832310 intergenic CG12713 +,dbo + chr3L 15832404 intergenic CG12713 +,dbo + chr3L_14_15830001 chr3L_15830001 RAL-371_125b 1632 chr3L 15840389 15840438 chr3L 15840527 15840576 5 138 2.0 4.0 3.0 1.2 187 chr3L 15840389 intron CG32150 - chr3L 15840482 intron CG32150 - chr3L 15840576 intron CG32150 - chr3L_5_15840001 chr3L_15840001 RAL-371_125b 1633 chr3L 15850916 15850970 chr3L 15851045 15851099 9 129 5.0 2.5 3.8 1.9 183 chr3L 15850916 3` UTR pHCl - chr3L 15851008 3` UTR pHCl - chr3L 15851099 3` UTR pHCl - chr3L_9_15850001 chr3L_15850001 RAL-371_125b 1634 chr3L 15871542 15871610 chr3L 15871676 15871744 16 134 4.0 3.0 3.5 3.6 202 chr3L 15871542 intron pHCl - chr3L 15871643 intron pHCl - chr3L 15871744 intron pHCl - chr3L_16_15870001 chr3L_15870001 RAL-371_125b 1635 chr3L 15883153 15883213 chr3L 15883496 15883556 7 343 1.5 5.5 3.5 1.6 403 chr3L 15883153 intron pHCl - chr3L 15883354 intron pHCl - chr3L 15883556 intron pHCl - chr3L_7_15880001 chr3L_15880001 RAL-371_125b 1636 chr3L 15899198 15899251 chr3L 15899806 15899848 jockey 10 601 2.5 5.5 4.0 2.0 650 chr3L 15899198 intergenic pHCl - chr3L 15899523 intergenic pHCl - chr3L 15899848 intergenic sff - chr3L_10_15895001 chr3L_15895001 RAL-371_125b 1637 chr3L 15920734 15920795 chr3L 15920870 15920942 14 142 3.5 4.5 4.0 2.8 208 chr3L 15920734 intron sff - chr3L 15920838 intron sff - chr3L 15920942 intron sff - chr3L_14_15920001 chr3L_15920001 RAL-371_125b 1638 chr3L 15929154 15929214 chr3L 15938351 15938411 roo 14 9197 3.5 5.0 4.2 2.7 9257 chr3L 15929154 intron Pka-C3 - chr3L 15933782 intron Pka-C3 - chr3L 15938411 intron Pka-C3 - chr3L_14_15930001 chr3L_15930001 RAL-371_125b 1639 chr3L 15946463 15946534 chr3L 15946599 15946670 5 136 3.0 0.0 1.5 2.0 207 chr3L 15946463 intron Pka-C3 - chr3L 15946566 intron Pka-C3 - chr3L 15946670 intron Pka-C3 - chr3L_5_15945001 chr3L_15945001 RAL-371_125b 1640 chr3L 15948727 15948768 chr3L 15948828 15948886 6 123 2.0 6.0 4.0 1.2 159 chr3L 15948727 intron Pka-C3 - chr3L 15948806 intron Pka-C3 - chr3L 15948886 intron Pka-C3 - chr3L_6_15945001 chr3L_15945001 RAL-371_125b 1641 chr3L 16162596 16162620 chr3L 16162730 16162754 5 134 2.0 10.5 6.2 0.7 158 chr3L 16162596 intron CG5151 - chr3L 16162675 intron CG5151 - chr3L 16162754 intron CG5151 - chr3L_5_16160001 chr3L_16160001 RAL-371_125b 1642 chr3L 16184062 16184130 chr3L 16188931 16188998 X-element 12 4869 2.0 3.5 2.8 3.2 4936 chr3L 16184062 intergenic not near genes chr3L 16186530 intergenic not near genes chr3L 16188998 intergenic not near genes chr3L_12_16185001 chr3L_16185001 RAL-371_125b 1643 chr3L 16310548 16310586 chr3L 16311132 16311171 6 584 2.0 2.5 2.2 1.9 623 chr3L 16310548 5` UTR CR32160 + chr3L 16310860 5` UTR CR32160 + chr3L 16311171 5` UTR CR32160 + chr3L_6_16310001 chr3L_16310001 RAL-371_125b 1644 chr3L 16431785 16431830 chr3L 16431929 16431974 4 144 2.5 0.0 1.2 1.8 189 chr3L 16431785 intron,intron CG33158 +,dsx-c73A - chr3L 16431880 intron,intron CG33158 +,dsx-c73A - chr3L 16431974 intron,intron CG33158 +,dsx-c73A - chr3L_4_16430001 chr3L_16430001 RAL-371_125b 1645 chr3L 16437046 16437103 chr3L 16437182 16437239 4 136 3.0 2.0 2.5 1.1 193 chr3L 16437046 intron,intron CG33158 +,dsx-c73A - chr3L 16437142 intron,intron CG33158 +,dsx-c73A - chr3L 16437239 intron,intron CG33158 +,dsx-c73A - chr3L_4_16435001 chr3L_16435001 RAL-371_125b 1646 chr3L 16443843 16443869 chr3L 16446208 16446259 Doc 8 2382 4.0 4.5 4.2 1.5 2416 chr3L 16443843 intron,intron CG33158 +,dsx-c73A - chr3L 16445051 intron,intron CG33158 +,dsx-c73A - chr3L 16446259 intron,intron CG33158 +,dsx-c73A - chr3L_8_16445001 chr3L_16445001 RAL-371_125b 1647 chr3L 16457488 16457544 chr3L 16457634 16457689 8 145 5.5 4.0 4.8 1.4 201 chr3L 16457488 intron CG33158 + chr3L 16457588 intron CG33158 + chr3L 16457689 intron CG33158 + chr3L_8_16455001 chr3L_16455001 RAL-371_125b 1648 chr3L 16457870 16457922 chr3L 16457996 16458019 7 122 3.0 1.5 2.2 2.2 149 chr3L 16457870 intron CG33158 + chr3L 16457944 intron CG33158 + chr3L 16458019 intron CG33158 + chr3L_7_16455001 chr3L_16455001 RAL-371_125b 1649 chr3L 16493937 16493966 chr3L 16494504 16494532 jockey 6 566 8.5 3.0 5.8 0.9 595 chr3L 16493937 intron,exon,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494234 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494532 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_6_16490001 chr3L_16490001 RAL-371_125b 1650 chr3L 16493969 16494001 chr3L 16494496 16494568 jockey 7 558 5.5 2.0 3.8 1.5 599 chr3L 16493969 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494268 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494568 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_7_16490001 chr3L_16490001 RAL-371_125b 1651 chr3L 16537821 16537874 chr3L 16537958 16538006 13 137 1.5 3.5 2.5 3.7 185 chr3L 16537821 intron CG43373 - chr3L 16537914 intron CG43373 - chr3L 16538006 intron CG43373 - chr3L_13_16535001 chr3L_16535001 RAL-371_125b 1652 chr3L 16540011 16540081 chr3L 16540149 16540179 12 135 3.0 4.0 3.5 2.7 168 chr3L 16540011 intron CG43373 - chr3L 16540095 intron CG43373 - chr3L 16540179 intron CG43373 - chr3L_12_16540001 chr3L_16540001 RAL-371_125b 1653 chr3L 16558156 16558181 chr3L 16558312 16558337 6 156 5.0 5.5 5.2 1.0 181 chr3L 16558156 intergenic CG4229 + chr3L 16558246 intergenic CG4229 + chr3L 16558337 intergenic CG4229 + chr3L_6_16555001 chr3L_16555001 RAL-371_125b 1654 chr3L 16560262 16560332 chr3L 16560397 16560452 11 130 2.5 4.0 3.2 2.6 190 chr3L 16560262 intergenic not near genes chr3L 16560357 intergenic not near genes chr3L 16560452 intergenic not near genes chr3L_11_16560001 chr3L_16560001 RAL-371_125b 1655 chr3L 16561086 16561130 chr3L 16561189 16561252 11 115 2.0 6.0 4.0 2.2 166 chr3L 16561086 intergenic not near genes chr3L 16561169 intergenic not near genes chr3L 16561252 intergenic not near genes chr3L_11_16560001 chr3L_16560001 RAL-371_125b 1656 chr3L 16563187 16563206 chr3L 16563318 16563337 5 131 5.0 0.0 2.5 1.4 150 chr3L 16563187 intergenic Mipp1 - chr3L 16563262 intergenic Mipp1 - chr3L 16563337 intergenic Mipp1 - chr3L_5_16560001 chr3L_16560001 RAL-371_125b 1657 chr3L 16616466 16616529 chr3L 16621844 16621907 297 7 5374 3.0 5.0 4.0 1.4 5441 chr3L 16616466 3` UTR Abl - chr3L 16619186 3` UTR Abl - chr3L 16621907 3` UTR Abl - chr3L_7_16615001 chr3L_16615001 RAL-371_125b 1658 chr3L 16642766 16642820 chr3L 16642890 16642953 4 119 4.0 1.5 2.8 1.1 187 chr3L 16642766 intron Abl - chr3L 16642860 intron Abl - chr3L 16642953 intron Abl - chr3L_4_16640001 chr3L_16640001 RAL-371_125b 1659 chr3L 16652640 16652711 chr3L 16652769 16652840 15 127 2.0 6.5 4.2 2.9 200 chr3L 16652640 intron Baldspot - chr3L 16652740 intron Baldspot - chr3L 16652840 intron Baldspot - chr3L_15_16650001 chr3L_16650001 RAL-371_125b 1660 chr3L 16690129 16690163 chr3L 16690260 16690294 5 131 3.5 9.5 6.5 0.7 165 chr3L 16690129 intron,intron,intron Lasp -,CG43954 -,CR45179 + chr3L 16690212 intron,intron,intron Lasp -,CG43954 -,CR45179 + chr3L 16690294 intron,intron,intron Lasp -,CG43954 -,CR45179 + chr3L_5_16690001 chr3L_16690001 RAL-371_125b 1661 chr3L 16698349 16698410 chr3L 16698475 16698552 10 137 4.0 2.0 3.0 2.5 203 chr3L 16698349 intron,intron Lasp -,CG43954 - chr3L 16698450 intron,intron Lasp -,CG43954 - chr3L 16698552 intron,intron Lasp -,CG43954 - chr3L_10_16695001 chr3L_16695001 RAL-371_125b 1662 chr3L 16764530 16764605 chr3L 16764673 16764762 9 155 2.5 0.0 1.2 4.1 232 chr3L 16764530 intergenic not near genes chr3L 16764646 intergenic not near genes chr3L 16764762 intergenic not near genes chr3L_9_16760001 chr3L_16760001 RAL-371_125b 1663 chr3L 16800533 16800582 chr3L 16800721 16800770 11 188 4.5 1.0 2.8 2.9 237 chr3L 16800533 intron CG9674 - chr3L 16800652 intron CG9674 - chr3L 16800770 intron CG9674 - chr3L_11_16800001 chr3L_16800001 RAL-371_125b 1664 chr3L 16808007 16808070 chr3L 16808133 16808199 4 127 3.0 3.5 3.2 1.0 192 chr3L 16808007 intron nudC + chr3L 16808103 intron nudC + chr3L 16808199 intron nudC + chr3L_4_16805001 chr3L_16805001 RAL-371_125b 1665 chr3L 16818707 16818768 chr3L 16818833 16818894 13 124 6.0 3.0 4.5 2.4 187 chr3L 16818707 intron,intron nudC +,CG13024 - chr3L 16818800 intron,intron nudC +,CG13024 - chr3L 16818894 intron,intron nudC +,CG13024 - chr3L_13_16815001 chr3L_16815001 RAL-371_125b 1666 chr3L 16825341 16825349 chr3L 16825470 16825478 4 129 0.0 3.0 1.5 1.6 137 chr3L 16825341 intron CG13024 - chr3L 16825410 intron CG13024 - chr3L 16825478 intron CG13024 - chr3L_4_16825001 chr3L_16825001 RAL-371_125b 1667 chr3L 16836275 16836345 chr3L 16836417 16836487 10 141 4.0 0.0 2.0 3.3 212 chr3L 16836275 intergenic not near genes chr3L 16836381 intergenic not near genes chr3L 16836487 intergenic not near genes chr3L_10_16835001 chr3L_16835001 RAL-371_125b 1668 chr3L 16844979 16845023 chr3L 16845142 16845186 6 163 6.0 1.5 3.8 1.2 207 chr3L 16844979 5` UTR CG9669 - chr3L 16845082 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845186 intergenic CG9669 -,CG9715 + chr3L_6_16845001 chr3L_16845001 RAL-371_125b 1669 chr3L 16869540 16869598 chr3L 16869673 16869731 11 132 1.0 3.5 2.2 3.4 191 chr3L 16869540 intron Lmpt + chr3L 16869636 intron Lmpt + chr3L 16869731 intron Lmpt + chr3L_11_16865001 chr3L_16865001 RAL-371_125b 1670 chr3L 16870828 16870876 chr3L 16870969 16871017 7 142 2.0 0.0 1.0 3.5 189 chr3L 16870828 intron Lmpt + chr3L 16870922 intron Lmpt + chr3L 16871017 intron Lmpt + chr3L_7_16870001 chr3L_16870001 RAL-371_125b 1671 chr3L 16913675 16913732 chr3L 16913907 16913974 12 240 5.5 6.0 5.8 1.8 299 chr3L 16913675 intron Lmpt + chr3L 16913824 intron Lmpt + chr3L 16913974 intron Lmpt + chr3L_12_16910001 chr3L_16910001 RAL-371_125b 1672 chr3L 16919919 16919932 chr3L 16920075 16920088 4 154 6.0 2.0 4.0 0.8 169 chr3L 16919919 intron Lmpt + chr3L 16920004 intron Lmpt + chr3L 16920088 intron Lmpt + chr3L_4_16920001 chr3L_16920001 RAL-371_125b 1673 chr3L 16941363 16941393 chr3L 16941514 16941544 7 151 10.5 1.5 6.0 1.0 181 chr3L 16941363 intron Cpr73D - chr3L 16941454 intron Cpr73D - chr3L 16941544 intron Cpr73D - chr3L_7_16940001 chr3L_16940001 RAL-371_125b 1674 chr3L 16945697 16945756 chr3L 16954888 16954917 roo 15 9194 3.5 4.5 4.0 3.0 9220 chr3L 16945697 exon Obp73a + chr3L 16950307 intergenic not near genes chr3L 16954917 5` UTR Nc73EF + chr3L_15_16950001 chr3L_16950001 RAL-371_125b 1675 chr3L 17084960 17085017 chr3L 17094159 17094216 roo 10 9199 8.0 4.5 6.2 1.4 9256 chr3L 17084960 intron Rbp6 - chr3L 17089588 intron Rbp6 - chr3L 17094216 intron Rbp6 - chr3L_10_17085001 chr3L_17085001 RAL-371_125b 1676 chr3L 17134262 17134324 chr3L 17134994 17135055 10 729 2.0 6.0 4.0 2.0 793 chr3L 17134262 intron Rbp6 - chr3L 17134658 intron Rbp6 - chr3L 17135055 intron Rbp6 - chr3L_10_17130001 chr3L_17130001 RAL-371_125b 1677 chr3L 17217216 17217273 chr3L 17217346 17217403 10 129 2.0 3.0 2.5 2.9 187 chr3L 17217216 intron Rbp6 - chr3L 17217310 intron Rbp6 - chr3L 17217403 intron Rbp6 - chr3L_10_17215001 chr3L_17215001 RAL-371_125b 1678 chr3L 17237339 17237402 chr3L 17237541 17237604 11 202 3.0 1.0 2.0 3.7 265 chr3L 17237339 intron Rbp6 - chr3L 17237472 intron Rbp6 - chr3L 17237604 intron Rbp6 - chr3L_11_17235001 chr3L_17235001 RAL-371_125b 1679 chr3L 17247461 17247539 chr3L 17248963 17249041 10 1499 4.5 17.0 10.8 0.8 1580 chr3L 17247461 intron CR43870 + chr3L 17248251 intron CR43870 + chr3L 17249041 intron CR43870 + chr3L_10_17245001 chr3L_17245001 RAL-371_125b 1680 chr3L 17247582 17247656 chr3L 17249031 17249096 8 1441 11.0 22.0 16.5 0.5 1514 chr3L 17247582 intron CR43870 + chr3L 17248339 intron CR43870 + chr3L 17249096 intron CR43870 + chr3L_8_17245001 chr3L_17245001 RAL-371_125b 1681 chr3L 17331025 17331085 chr3L 17331165 17331225 8 140 3.0 3.0 3.0 2.0 200 chr3L 17331025 intergenic not near genes chr3L 17331125 intergenic not near genes chr3L 17331225 intergenic not near genes chr3L_8_17330001 chr3L_17330001 RAL-371_125b 1682 chr3L 17367387 17367459 chr3L 17367531 17367603 14 144 2.0 2.0 2.0 4.7 216 chr3L 17367387 intergenic CR45688 +,Cad74A - chr3L 17367495 intergenic CR45688 +,Cad74A - chr3L 17367603 intergenic Cad74A -,CR45688 + chr3L_14_17365001 chr3L_17365001 RAL-371_125b 1683 chr3L 17395933 17395961 chr3L 17396083 17396111 9 148 5.0 6.5 5.8 1.3 178 chr3L 17395933 intergenic blot - chr3L 17396022 intergenic blot - chr3L 17396111 3` UTR blot - chr3L_9_17395001 chr3L_17395001 RAL-371_125b 1684 chr3L 17408872 17408917 chr3L 17408993 17409043 6 124 6.0 4.0 5.0 1.0 171 chr3L 17408872 intron blot - chr3L 17408958 intron blot - chr3L 17409043 intron blot - chr3L_6_17405001 chr3L_17405001 RAL-371_125b 1685 chr3L 17461972 17461990 chr3L 17462167 17462185 6 195 5.0 4.5 4.8 1.0 213 chr3L 17461972 intergenic not near genes chr3L 17462078 intergenic not near genes chr3L 17462185 intergenic not near genes chr3L_6_17460001 chr3L_17460001 RAL-371_125b 1686 chr3L 17492441 17492495 chr3L 17492800 17492854 8 356 3.5 2.5 3.0 2.0 413 chr3L 17492441 intron Oatp74D + chr3L 17492648 intron Oatp74D + chr3L 17492854 intron Oatp74D + chr3L_8_17490001 chr3L_17490001 RAL-371_125b 1687 chr3L 17516944 17517003 chr3L 17524552 17524605 412 13 7605 3.0 4.0 3.5 2.9 7661 chr3L 17516944 intron CG7564 + chr3L 17520774 intron CG7564 + chr3L 17524605 3` UTR CG7564 + chr3L_13_17520001 chr3L_17520001 RAL-371_125b 1688 chr3L 17586936 17586989 chr3L 17587111 17587173 6 179 4.0 3.0 3.5 1.3 237 chr3L 17586936 intron Eip74EF - chr3L 17587054 intron Eip74EF - chr3L 17587173 intron Eip74EF - chr3L_6_17585001 chr3L_17585001 RAL-371_125b 1689 chr3L 17612179 17612232 chr3L 17612303 17612358 10 125 4.0 5.5 4.8 1.7 179 chr3L 17612179 intron Eip74EF - chr3L 17612268 intron Eip74EF - chr3L 17612358 intron Eip74EF - chr3L_10_17610001 chr3L_17610001 RAL-371_125b 1690 chr3L 17674601 17674654 chr3L 17675316 17675327 5 706 2.0 1.0 1.5 2.0 726 chr3L 17674601 intron CG34251 + chr3L 17674964 intron CG34251 + chr3L 17675327 intron CG34251 + chr3L_5_17670001 chr3L_17670001 RAL-371_125b 1691 chr3L 17698226 17698235 chr3L 17698858 17698867 Juan 4 632 6.0 3.0 4.5 0.7 641 chr3L 17698226 intron Ccn + chr3L 17698546 intron Ccn + chr3L 17698867 intron Ccn + chr3L_4_17695001 chr3L_17695001 RAL-371_125b 1692 chr3L 17730808 17730870 chr3L 17738188 17738250 mdg1 8 7379 2.5 4.5 3.5 1.8 7442 chr3L 17730808 intron Ccn + chr3L 17734529 intron Ccn + chr3L 17738250 intron Ccn + chr3L_8_17730001 chr3L_17730001 RAL-371_125b 1693 chr3L 17789805 17789867 chr3L 17789931 17789993 8 126 3.5 4.5 4.0 1.6 188 chr3L 17789805 intergenic not near genes chr3L 17789899 intergenic not near genes chr3L 17789993 intergenic not near genes chr3L_8_17785001 chr3L_17785001 RAL-371_125b 1694 chr3L 17790586 17790634 chr3L 17790901 17790949 12 314 2.0 6.0 4.0 2.4 363 chr3L 17790586 intergenic CG42815 - chr3L 17790768 intergenic CG42815 - chr3L 17790949 intergenic CG42815 - chr3L_12_17790001 chr3L_17790001 RAL-371_125b 1695 chr3L 17799774 17799837 chr3L 17801611 17801674 S-element 10 1837 5.0 6.0 5.5 1.5 1900 chr3L 17799774 intron NUCB1 - chr3L 17800724 intron NUCB1 - chr3L 17801674 intron NUCB1 - chr3L_10_17800001 chr3L_17800001 RAL-371_125b 1696 chr3L 17836182 17836230 chr3L 17836309 17836357 9 127 4.0 4.5 4.2 1.7 175 chr3L 17836182 intron Grd + chr3L 17836270 intron Grd + chr3L 17836357 intron Grd + chr3L_9_17835001 chr3L_17835001 RAL-371_125b 1697 chr3L 17991534 17991583 chr3L 17991662 17991711 11 128 5.0 5.5 5.2 1.8 177 chr3L 17991534 intron Eip75B - chr3L 17991622 intron Eip75B - chr3L 17991711 intron Eip75B - chr3L_11_17990001 chr3L_17990001 RAL-371_125b 1698 chr3L 18000625 18000701 chr3L 18000752 18000828 14 127 1.5 3.5 2.5 4.0 203 chr3L 18000625 intron Eip75B - chr3L 18000726 intron Eip75B - chr3L 18000828 intron Eip75B - chr3L_14_18000001 chr3L_18000001 RAL-371_125b 1699 chr3L 18006543 18006616 chr3L 18006867 18006928 14 321 3.0 3.0 3.0 3.5 385 chr3L 18006543 intron Eip75B - chr3L 18006736 intron Eip75B - chr3L 18006928 intron Eip75B - chr3L_14_18005001 chr3L_18005001 RAL-371_125b 1700 chr3L 18020601 18020670 chr3L 18020835 18020904 9 234 4.0 1.5 2.8 2.4 303 chr3L 18020601 intron Eip75B - chr3L 18020752 intron Eip75B - chr3L 18020904 intron Eip75B - chr3L_9_18020001 chr3L_18020001 RAL-371_125b 1701 chr3L 18029910 18029933 chr3L 18030037 18030059 7 127 4.5 0.0 2.2 2.2 149 chr3L 18029910 intron Eip75B - chr3L 18029984 intron Eip75B - chr3L 18030059 intron Eip75B - chr3L_7_18025001 chr3L_18025001 RAL-371_125b 1702 chr3L 18047666 18047735 chr3L 18056773 18056842 roo 6 9106 4.0 1.5 2.8 1.6 9176 chr3L 18047666 intron Eip75B - chr3L 18052254 intron Eip75B - chr3L 18056842 intron Eip75B - chr3L_6_18050001 chr3L_18050001 RAL-371_125b 1703 chr3L 18064014 18064071 chr3L 18064148 18064207 5 134 2.0 1.5 1.8 1.8 193 chr3L 18064014 intron Eip75B - chr3L 18064110 intron Eip75B - chr3L 18064207 intron Eip75B - chr3L_5_18060001 chr3L_18060001 RAL-371_125b 1704 chr3L 18077108 18077134 chr3L 18077253 18077279 6 145 5.0 1.5 3.2 1.4 171 chr3L 18077108 intergenic CR45392 + chr3L 18077194 intergenic CR45392 + chr3L 18077279 intergenic CR45392 + chr3L_6_18075001 chr3L_18075001 RAL-371_125b 1705 chr3L 18092733 18092754 chr3L 18092898 18092919 9 165 5.5 0.0 2.8 2.4 186 chr3L 18092733 intron CG13698 - chr3L 18092826 intron CG13698 - chr3L 18092919 intron CG13698 - chr3L_9_18090001 chr3L_18090001 RAL-371_125b 1706 chr3L 18107569 18107641 chr3L 18107712 18107784 12 143 1.5 5.0 3.2 2.9 215 chr3L 18107569 intergenic mRpS26 +,CG5147 - chr3L 18107676 intergenic CG5147 -,mRpS26 + chr3L 18107784 intergenic CG5147 -,mRpS26 + chr3L_12_18105001 chr3L_18105001 RAL-371_125b 1707 chr3L 18118191 18118209 chr3L 18118319 18118337 10 127 3.5 1.5 2.5 2.9 146 chr3L 18118191 3` UTR,intron CG32195 +,CG7341 + chr3L 18118264 3` UTR,intron CG32195 +,CG7341 + chr3L 18118337 3` UTR,intron CG32195 +,CG7341 + chr3L_10_18115001 chr3L_18115001 RAL-371_125b 1708 chr3L 18124379 18124424 chr3L 18124513 18124558 9 134 3.0 1.5 2.2 2.8 179 chr3L 18124379 intergenic not near genes chr3L 18124468 intergenic not near genes chr3L 18124558 intergenic not near genes chr3L_9_18120001 chr3L_18120001 RAL-371_125b 1709 chr3L 18132987 18133023 chr3L 18133127 18133163 8 140 1.5 0.0 0.8 4.4 176 chr3L 18132987 intergenic Cyp312a1 - chr3L 18133075 intergenic Cyp312a1 - chr3L 18133163 intergenic Cyp312a1 - chr3L_8_18130001 chr3L_18130001 RAL-371_125b 1710 chr3L 18138130 18138184 chr3L 18138264 18138283 9 128 6.0 8.5 7.2 1.1 153 chr3L 18138130 intergenic not near genes chr3L 18138206 intergenic not near genes chr3L 18138283 intergenic not near genes chr3L_9_18135001 chr3L_18135001 RAL-371_125b 1711 chr3L 18172652 18172704 chr3L 18172778 18172830 11 126 5.0 6.5 5.8 1.6 178 chr3L 18172652 intron W - chr3L 18172741 intron W - chr3L 18172830 intron W - chr3L_11_18170001 chr3L_18170001 RAL-371_125b 1712 chr3L 18175768 18175837 chr3L 18176057 18176126 12 289 3.5 4.0 3.8 2.5 358 chr3L 18175768 intron W - chr3L 18175947 intron W - chr3L 18176126 intron W - chr3L_12_18175001 chr3L_18175001 RAL-371_125b 1713 chr3L 18186591 18186611 chr3L 18186780 18186800 4 189 9.5 4.5 7.0 0.5 209 chr3L 18186591 intergenic not near genes chr3L 18186696 intergenic not near genes chr3L 18186800 intergenic not near genes chr3L_4_18185001 chr3L_18185001 RAL-371_125b 1714 chr3L 18189557 18189573 chr3L 18190234 18190250 S-element 5 675 4.5 4.0 4.2 1.0 693 chr3L 18189557 intergenic not near genes chr3L 18189904 intergenic not near genes chr3L 18190250 intergenic not near genes chr3L_5_18185001 chr3L_18185001 RAL-371_125b 1715 chr3L 18226075 18226091 chr3L 18226210 18226226 4 135 0.0 3.5 1.8 1.4 151 chr3L 18226075 intergenic not near genes chr3L 18226150 intergenic not near genes chr3L 18226226 intergenic not near genes chr3L_4_18225001 chr3L_18225001 RAL-371_125b 1716 chr3L 18262424 18262483 chr3L 18262557 18262616 9 133 3.5 1.0 2.2 2.8 192 chr3L 18262424 intergenic not near genes chr3L 18262520 intergenic not near genes chr3L 18262616 intergenic not near genes chr3L_9_18260001 chr3L_18260001 RAL-371_125b 1717 chr3L 18276034 18276099 chr3L 18276179 18276244 7 141 3.0 4.5 3.8 1.5 210 chr3L 18276034 intergenic not near genes chr3L 18276139 intergenic not near genes chr3L 18276244 intergenic not near genes chr3L_7_18275001 chr3L_18275001 RAL-371_125b 1718 chr3L 18287901 18287966 chr3L 18288032 18288097 6 131 0.5 2.5 1.5 2.4 196 chr3L 18287901 intergenic not near genes chr3L 18287999 intergenic not near genes chr3L 18288097 intergenic not near genes chr3L_6_18285001 chr3L_18285001 RAL-371_125b 1719 chr3L 18406085 18406150 chr3L 18406211 18406276 10 125 0.5 5.0 2.8 2.6 191 chr3L 18406085 intergenic not near genes chr3L 18406180 intergenic not near genes chr3L 18406276 intergenic not near genes chr3L_10_18405001 chr3L_18405001 RAL-371_125b 1720 chr3L 18408696 18408749 chr3L 18408832 18408885 9 136 3.0 1.5 2.2 2.8 189 chr3L 18408696 intergenic not near genes chr3L 18408790 intergenic not near genes chr3L 18408885 intergenic not near genes chr3L_9_18405001 chr3L_18405001 RAL-371_125b 1721 chr3L 18436048 18436083 chr3L 18436196 18436231 4 148 3.0 3.5 3.2 1.0 183 chr3L 18436048 intergenic not near genes chr3L 18436140 intergenic not near genes chr3L 18436231 intergenic not near genes chr3L_4_18435001 chr3L_18435001 RAL-371_125b 1722 chr3L 18448578 18448618 chr3L 18448720 18448760 6 141 7.0 1.5 4.2 1.2 182 chr3L 18448578 intergenic not near genes chr3L 18448669 intergenic not near genes chr3L 18448760 intergenic not near genes chr3L_6_18445001 chr3L_18445001 RAL-371_125b 1723 chr3L 18456229 18456296 chr3L 18456367 18456426 10 137 2.5 3.0 2.8 2.6 197 chr3L 18456229 intergenic CR44670 - chr3L 18456328 intergenic CR44670 - chr3L 18456426 3` UTR CR44670 - chr3L_10_18455001 chr3L_18455001 RAL-371_125b 1724 chr3L 18464473 18464498 chr3L 18464584 18464619 7 124 1.0 6.0 3.5 1.6 146 chr3L 18464473 intergenic not near genes chr3L 18464546 intergenic not near genes chr3L 18464619 intergenic not near genes chr3L_7_18460001 chr3L_18460001 RAL-371_125b 1725 chr3L 18485644 18485713 chr3L 18485781 18485850 10 137 2.5 4.5 3.5 2.2 206 chr3L 18485644 3` UTR AstC-R2 - chr3L 18485747 3` UTR AstC-R2 - chr3L 18485850 3` UTR AstC-R2 - chr3L_10_18485001 chr3L_18485001 RAL-371_125b 1726 chr3L 18497327 18497398 chr3L 18497521 18497592 17 190 4.5 1.0 2.8 4.5 265 chr3L 18497327 intron AstC-R2 - chr3L 18497460 intron AstC-R2 - chr3L 18497592 intron AstC-R2 - chr3L_17_18495001 chr3L_18495001 RAL-371_125b 1727 chr3L 18498596 18498673 chr3L 18498943 18499020 8 341 0.5 0.5 0.5 5.3 424 chr3L 18498596 intron AstC-R2 - chr3L 18498808 intron AstC-R2 - chr3L 18499020 intron AstC-R2 - chr3L_8_18495001 chr3L_18495001 RAL-371_125b 1728 chr3L 18506093 18506152 chr3L 18509605 18509665 F-element 9 3511 5.0 3.0 4.0 1.8 3572 chr3L 18506093 intergenic not near genes chr3L 18507879 intergenic not near genes chr3L 18509665 intergenic not near genes chr3L_9_18505001 chr3L_18505001 RAL-371_125b 1729 chr3L 18528592 18528643 chr3L 18537803 18537854 roo 8 9211 3.5 2.5 3.0 2.0 9262 chr3L 18528592 intergenic not near genes chr3L 18533223 intergenic not near genes chr3L 18537854 intergenic not near genes chr3L_8_18530001 chr3L_18530001 RAL-371_125b 1730 chr3L 18546678 18546730 chr3L 18546800 18546819 7 132 2.5 2.5 2.5 2.0 141 chr3L 18546678 intergenic not near genes chr3L 18546748 intergenic not near genes chr3L 18546819 intergenic not near genes chr3L_7_18545001 chr3L_18545001 RAL-371_125b 1731 chr3L 18581298 18581353 chr3L 18581424 18581478 7 125 8.0 3.0 5.5 1.1 180 chr3L 18581298 intergenic not near genes chr3L 18581388 intergenic not near genes chr3L 18581478 intergenic not near genes chr3L_7_18580001 chr3L_18580001 RAL-371_125b 1732 chr3L 18639995 18640061 chr3L 18640198 18640202 5 185 4.0 4.0 4.0 1.0 207 chr3L 18639995 intron MYPT-75D + chr3L 18640098 intron MYPT-75D + chr3L 18640202 intron MYPT-75D + chr3L_5_18640001 chr3L_18640001 RAL-371_125b 1733 chr3L 18656173 18656206 chr3L 18656283 18656341 8 131 4.0 4.5 4.2 1.5 168 chr3L 18656173 intron MYPT-75D + chr3L 18656257 intron MYPT-75D + chr3L 18656341 intron MYPT-75D + chr3L_8_18655001 chr3L_18655001 RAL-371_125b 1734 chr3L 18665217 18665242 chr3L 18665353 18665363 8 134 2.0 5.5 3.8 1.7 146 chr3L 18665217 intron MYPT-75D + chr3L 18665290 intron MYPT-75D + chr3L 18665363 intron MYPT-75D + chr3L_8_18665001 chr3L_18665001 RAL-371_125b 1735 chr3L 18677869 18677912 chr3L 18678014 18678057 10 145 2.0 8.0 5.0 1.7 188 chr3L 18677869 3` UTR GNBP1 + chr3L 18677963 intergenic GNBP1 + chr3L 18678057 intergenic GNBP1 + chr3L_10_18675001 chr3L_18675001 RAL-371_125b 1736 chr3L 18682679 18682713 chr3L 18682829 18682863 9 151 23.0 23.0 23.0 0.4 184 chr3L 18682679 exon CG32202 + chr3L 18682771 3` UTR CG32202 + chr3L 18682863 intergenic CG32202 +,Chmp1 - chr3L_9_18680001 chr3L_18680001 RAL-371_125b 1737 chr3L 18710742 18710776 chr3L 18718742 18718761 Stalker2 9 7998 3.0 2.5 2.8 2.4 8019 chr3L 18710742 intergenic not near genes chr3L 18714752 intergenic not near genes chr3L 18718761 intergenic not near genes chr3L_9_18710001 chr3L_18710001 RAL-371_125b 1738 chr3L 18721739 18721798 chr3L 18721880 18721935 8 140 2.5 3.5 3.0 2.0 196 chr3L 18721739 intergenic CG12477 - chr3L 18721837 intergenic CG12477 - chr3L 18721935 3` UTR CG12477 - chr3L_8_18720001 chr3L_18720001 RAL-371_125b 1739 chr3L 18736013 18736047 chr3L 18736157 18736192 6 145 1.0 5.0 3.0 1.5 179 chr3L 18736013 intergenic not near genes chr3L 18736102 intergenic not near genes chr3L 18736192 intergenic not near genes chr3L_6_18735001 chr3L_18735001 RAL-371_125b 1740 chr3L 18772371 18772430 chr3L 18781102 18781161 roo 11 8731 2.5 5.0 3.8 2.3 8790 chr3L 18772371 intron ftz-f1 - chr3L 18776766 intron ftz-f1 - chr3L 18781161 intron ftz-f1 - chr3L_11_18775001 chr3L_18775001 RAL-371_125b 1741 chr3L 18810106 18810174 chr3L 18810227 18810306 11 131 2.0 0.0 1.0 5.5 200 chr3L 18810106 intron CG14073 - chr3L 18810206 intron CG14073 - chr3L 18810306 intron CG14073 - chr3L_11_18810001 chr3L_18810001 RAL-371_125b 1742 chr3L 18833744 18833796 chr3L 18834958 18835010 1360 14 1214 4.0 3.5 3.8 2.9 1266 chr3L 18833744 intron Indy - chr3L 18834377 intron Indy - chr3L 18835010 intron Indy - chr3L_14_18830001 chr3L_18830001 RAL-371_125b 1743 chr3L 18924431 18924475 chr3L 18924557 18924601 7 126 5.5 1.5 3.5 1.6 170 chr3L 18924431 intron CG32204 - chr3L 18924516 intron CG32204 - chr3L 18924601 intron CG32204 - chr3L_7_18920001 chr3L_18920001 RAL-371_125b 1744 chr3L 18933587 18933658 chr3L 18933731 18933801 11 143 3.0 4.0 3.5 2.4 214 chr3L 18933587 intron CG32204 - chr3L 18933694 intron CG32204 - chr3L 18933801 intron CG32204 - chr3L_11_18930001 chr3L_18930001 RAL-371_125b 1745 chr3L 18935789 18935862 chr3L 18935928 18936001 16 139 2.0 7.0 4.5 2.9 212 chr3L 18935789 intron CG32204 - chr3L 18935895 intron CG32204 - chr3L 18936001 intron CG32204 - chr3L_16_18935001 chr3L_18935001 RAL-371_125b 1746 chr3L 18941136 18941183 chr3L 18941297 18941344 7 159 3.0 3.5 3.2 1.7 208 chr3L 18941136 intron CG32204 - chr3L 18941240 intron CG32204 - chr3L 18941344 intron CG32204 - chr3L_7_18940001 chr3L_18940001 RAL-371_125b 1747 chr3L 18942835 18942870 chr3L 18942998 18943033 6 158 3.5 4.0 3.8 1.2 198 chr3L 18942835 intron CG32204 - chr3L 18942934 intron CG32204 - chr3L 18943033 intron CG32204 - chr3L_6_18940001 chr3L_18940001 RAL-371_125b 1748 chr3L 18948869 18948883 chr3L 18949145 18949159 5 276 0.0 3.5 1.8 1.8 290 chr3L 18948869 intergenic not near genes chr3L 18949014 intergenic not near genes chr3L 18949159 intergenic not near genes chr3L_5_18945001 chr3L_18945001 RAL-371_125b 1749 chr3L 18958551 18958598 chr3L 18958677 18958724 7 126 4.5 3.5 4.0 1.4 173 chr3L 18958551 intergenic not near genes chr3L 18958638 intergenic not near genes chr3L 18958724 intergenic not near genes chr3L_7_18955001 chr3L_18955001 RAL-371_125b 1750 chr3L 19029402 19029472 chr3L 19029553 19029604 14 144 3.5 4.5 4.0 2.8 202 chr3L 19029402 intron nkd - chr3L 19029503 intron nkd - chr3L 19029604 intron nkd - chr3L_14_19025001 chr3L_19025001 RAL-371_125b 1751 chr3L 19081994 19082004 chr3L 19082146 19082156 5 152 6.5 3.5 5.0 0.8 162 chr3L 19081994 intron Mkp3 - chr3L 19082075 intron Mkp3 - chr3L 19082156 intron Mkp3 - chr3L_5_19080001 chr3L_19080001 RAL-371_125b 1752 chr3L 19082013 19082055 chr3L 19082139 19082202 5 144 2.0 3.0 2.5 1.4 189 chr3L 19082013 intron Mkp3 - chr3L 19082108 intron Mkp3 - chr3L 19082202 intron Mkp3 - chr3L_5_19080001 chr3L_19080001 RAL-371_125b 1753 chr3L 19111319 19111350 chr3L 19111456 19111486 7 137 3.5 7.0 5.2 1.1 167 chr3L 19111319 intron CG14082 - chr3L 19111402 intron CG14082 - chr3L 19111486 intron CG14082 - chr3L_7_19110001 chr3L_19110001 RAL-371_125b 1754 chr3L 19115601 19115651 chr3L 19115829 19115857 BS 6 222 9.5 4.5 7.0 0.8 256 chr3L 19115601 intron CG14082 - chr3L 19115729 intron CG14082 - chr3L 19115857 intron CG14082 - chr3L_6_19115001 chr3L_19115001 RAL-371_125b 1755 chr3L 19116999 19117005 chr3L 19124495 19124502 mdg1 4 7496 8.5 5.0 6.8 0.5 7503 chr3L 19116999 intron CG14082 - chr3L 19120750 intron CG14082 - chr3L 19124502 intron CG14082 - chr3L_4_19120001 chr3L_19120001 RAL-371_125b 1756 chr3L 19117009 19117075 chr3L 19124491 19124564 mdg1 19 7486 2.5 3.0 2.8 5.0 7555 chr3L 19117009 intron CG14082 - chr3L 19120786 intron CG14082 - chr3L 19124564 intron CG14082 - chr3L_19_19120001 chr3L_19120001 RAL-371_125b 1757 chr3L 19133631 19133687 chr3L 19133765 19133821 8 130 4.5 3.5 4.0 1.6 190 chr3L 19133631 intron CG14082 - chr3L 19133726 intron CG14082 - chr3L 19133821 intron CG14082 - chr3L_8_19130001 chr3L_19130001 RAL-371_125b 1758 chr3L 19138111 19138155 chr3L 19138243 19138299 12 136 0.0 4.5 2.2 3.8 188 chr3L 19138111 intron CG14082 - chr3L 19138205 intron CG14082 - chr3L 19138299 intron CG14082 - chr3L_12_19135001 chr3L_19135001 RAL-371_125b 1759 chr3L 19182348 19182405 chr3L 19182479 19182536 7 131 3.0 4.5 3.8 1.5 188 chr3L 19182348 intron fz2 - chr3L 19182442 intron fz2 - chr3L 19182536 intron fz2 - chr3L_7_19180001 chr3L_19180001 RAL-371_125b 1760 chr3L 19186397 19186424 chr3L 19186539 19186566 4 142 3.5 8.0 5.8 0.6 169 chr3L 19186397 intron fz2 - chr3L 19186482 intron fz2 - chr3L 19186566 intron fz2 - chr3L_4_19185001 chr3L_19185001 RAL-371_125b 1761 chr3L 19208013 19208085 chr3L 19209437 19209509 Doc 14 1420 3.0 2.0 2.5 4.0 1496 chr3L 19208013 intron fz2 - chr3L 19208761 intron fz2 - chr3L 19209509 intron fz2 - chr3L_14_19205001 chr3L_19205001 RAL-371_125b 1762 chr3L 19220634 19220635 chr3L 22908066 22908066 5 3687432 19.0 18.0 18.5 0.3 3687432 chr3L 19220634 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_5_21060001 chr3L_21060001 RAL-371_125b 1763 chr3L 19224198 19224212 chr3L 19224492 19224506 5 294 3.0 3.0 3.0 1.2 308 chr3L 19224198 intron fz2 - chr3L 19224352 intron fz2 - chr3L 19224506 intron fz2 - chr3L_5_19220001 chr3L_19220001 RAL-371_125b 1764 chr3L 19244079 19244134 chr3L 19244191 19244255 11 119 4.5 4.0 4.2 2.1 176 chr3L 19244079 intergenic not near genes chr3L 19244167 intergenic not near genes chr3L 19244255 intergenic not near genes chr3L_11_19240001 chr3L_19240001 RAL-371_125b 1765 chr3L 19282221 19282286 chr3L 19282367 19282432 11 146 4.0 4.5 4.2 2.1 211 chr3L 19282221 3` UTR Gbs-76A - chr3L 19282326 3` UTR Gbs-76A - chr3L 19282432 3` UTR Gbs-76A - chr3L_11_19280001 chr3L_19280001 RAL-371_125b 1766 chr3L 19398901 19398926 chr3L 19403668 19403693 F-element 7 4767 4.0 4.5 4.2 1.3 4792 chr3L 19398901 intron CG32206 - chr3L 19401297 intron CG32206 - chr3L 19403693 intron CG32206 - chr3L_7_19400001 chr3L_19400001 RAL-371_125b 1767 chr3L 19404952 19404992 chr3L 19405079 19405107 7 122 3.5 5.0 4.2 1.3 155 chr3L 19404952 intron CG32206 - chr3L 19405030 intron CG32206 - chr3L 19405107 intron CG32206 - chr3L_7_19405001 chr3L_19405001 RAL-371_125b 1768 chr3L 19417766 19417820 chr3L 19417896 19417950 8 125 3.5 3.5 3.5 1.8 184 chr3L 19417766 intergenic not near genes chr3L 19417858 intergenic not near genes chr3L 19417950 intergenic not near genes chr3L_8_19415001 chr3L_19415001 RAL-371_125b 1769 chr3L 19426734 19426772 chr3L 19426842 19426885 9 117 4.0 5.5 4.8 1.6 151 chr3L 19426734 intergenic not near genes chr3L 19426810 intergenic not near genes chr3L 19426885 intergenic not near genes chr3L_9_19425001 chr3L_19425001 RAL-371_125b 1770 chr3L 19439147 19439190 chr3L 19439276 19439314 5 128 5.0 3.5 4.2 1.0 167 chr3L 19439147 intergenic not near genes chr3L 19439230 intergenic not near genes chr3L 19439314 intergenic not near genes chr3L_5_19435001 chr3L_19435001 RAL-371_125b 1771 chr3L 19493257 19493312 chr3L 19493383 19493438 9 125 3.0 6.0 4.5 1.6 181 chr3L 19493257 intron CG9449 - chr3L 19493348 intron CG9449 - chr3L 19493438 intron CG9449 - chr3L_9_19490001 chr3L_19490001 RAL-371_125b 1772 chr3L 19527889 19527932 chr3L 19528018 19528061 7 128 6.0 2.5 4.2 1.3 172 chr3L 19527889 intergenic not near genes chr3L 19527975 intergenic not near genes chr3L 19528061 intergenic not near genes chr3L_7_19525001 chr3L_19525001 RAL-371_125b 1773 chr3L 19792342 19792352 chr3L 19792469 19792497 5 141 10.0 4.0 7.0 0.6 155 chr3L 19792342 intron,intron CG42637 -,Gyc76C - chr3L 19792420 intron,intron CG42637 -,Gyc76C - chr3L 19792497 intron,intron CG42637 -,Gyc76C - chr3L_5_19790001 chr3L_19790001 RAL-371_125b 1774 chr3L 19820261 19820317 chr3L 19827860 19827916 412 6 7599 3.5 2.5 3.0 1.5 7655 chr3L 19820261 intron Deaf1 + chr3L 19824088 intron Deaf1 + chr3L 19827916 intron Deaf1 + chr3L_6_19820001 chr3L_19820001 RAL-371_125b 1775 chr3L 19861779 19861848 chr3L 19863617 19863686 S-element 12 1838 0.5 5.0 2.8 3.2 1907 chr3L 19861779 5` UTR CR45433 + chr3L 19862732 intergenic not near genes chr3L 19863686 intergenic not near genes chr3L_12_19860001 chr3L_19860001 RAL-371_125b 1776 chr3L 19933486 19933559 chr3L 19934358 19934431 13 872 3.0 2.0 2.5 3.7 945 chr3L 19933486 intergenic CR45678 + chr3L 19933958 5` UTR CR45678 + chr3L 19934431 intergenic CR45678 + chr3L_13_19930001 chr3L_19930001 RAL-371_125b 1777 chr3L 19981162 19981219 chr3L 19981292 19981349 10 130 2.5 2.5 2.5 2.9 187 chr3L 19981162 intergenic not near genes chr3L 19981256 intergenic CG17732 + chr3L 19981349 intergenic CG17732 + chr3L_10_19980001 chr3L_19980001 RAL-371_125b 1778 chr3L 20086744 20086809 chr3L 20086872 20086937 10 127 3.0 1.5 2.2 3.1 193 chr3L 20086744 intron sNPF-R - chr3L 20086840 intron sNPF-R - chr3L 20086937 intron sNPF-R - chr3L_10_20085001 chr3L_20085001 RAL-371_125b 1779 chr3L 20113619 20113675 chr3L 20122926 20122982 roo 16 9307 1.5 2.0 1.8 5.7 9363 chr3L 20113619 intergenic not near genes chr3L 20118300 intergenic not near genes chr3L 20122982 intergenic not near genes chr3L_16_20115001 chr3L_20115001 RAL-371_125b 1780 chr3L 20143050 20143090 chr3L 20143180 20143220 11 129 1.5 4.5 3.0 2.8 170 chr3L 20143050 intergenic not near genes chr3L 20143135 intergenic not near genes chr3L 20143220 intergenic not near genes chr3L_11_20140001 chr3L_20140001 RAL-371_125b 1781 chr3L 20148239 20148312 chr3L 20148379 20148452 9 140 4.0 3.0 3.5 2.0 213 chr3L 20148239 intergenic not near genes chr3L 20148346 intergenic not near genes chr3L 20148452 intergenic not near genes chr3L_9_20145001 chr3L_20145001 RAL-371_125b 1782 chr3L 20212568 20212584 chr3L 20218195 20218211 mdg3 7 5627 6.5 4.0 5.2 1.1 5643 chr3L 20212568 intergenic CG7017 - chr3L 20215390 intergenic not near genes chr3L 20218211 intergenic CG6933 - chr3L_7_20215001 chr3L_20215001 RAL-371_125b 1783 chr3L 20257300 20257350 chr3L 20258464 20258520 pogo 7 1167 6.0 2.0 4.0 1.4 1220 chr3L 20257300 intron rdgC + chr3L 20257910 intron rdgC + chr3L 20258520 intron rdgC + chr3L_7_20255001 chr3L_20255001 RAL-371_125b 1784 chr3L 20316552 20316567 chr3L 20318263 20318318 4 1721 18.0 6.0 12.0 0.3 1766 chr3L 20316552 3` UTR,intron alphaSnap +,CR43875 - chr3L 20317435 5` UTR Spn77Ba + chr3L 20318318 intron Spn77Ba + chr3L_4_20315001 chr3L_20315001 RAL-371_125b 1785 chr3L 20321113 20321141 chr3L 20342875 20342900 17.6 4 21758 7.0 21.0 14.0 0.3 21787 chr3L 20321113 exon Spn77Bb + chr3L 20332006 intergenic not near genes chr3L 20342900 exon Spn77Bc + chr3L_4_20330001 chr3L_20330001 RAL-371_125b 1786 chr3L 20344238 20344257 chr3L 20344378 20344397 INE-1 6 140 4.5 7.5 6.0 0.9 159 chr3L 20344238 3` UTR Spn77Bc + chr3L 20344318 3` UTR Spn77Bc + chr3L 20344397 intergenic Spn77Bc + chr3L_6_20340001 chr3L_20340001 RAL-371_125b 1787 chr3L 20386903 20386971 chr3L 20387055 20387117 12 151 3.5 4.0 3.8 2.5 214 chr3L 20386903 intron fbl + chr3L 20387010 intron fbl + chr3L 20387117 intron fbl + chr3L_12_20385001 chr3L_20385001 RAL-371_125b 1788 chr3L 20419716 20419781 chr3L 20419858 20419923 21 134 2.5 10.5 6.5 2.8 207 chr3L 20419716 exon zye + chr3L 20419820 exon zye + chr3L 20419923 exon zye + chr3L_21_20415001 chr3L_20415001 RAL-371_125b 1789 chr3L 20447710 20447729 chr3L 20447844 20447863 4 133 2.5 6.0 4.2 0.8 153 chr3L 20447710 intron CG5910 + chr3L 20447786 intron CG5910 + chr3L 20447863 intron CG5910 + chr3L_4_20445001 chr3L_20445001 RAL-371_125b 1790 chr3L 20476727 20476772 chr3L 20484376 20484421 springer 9 7646 4.5 5.0 4.8 1.6 7694 chr3L 20476727 3` UTR isoQC + chr3L 20480574 intergenic not near genes chr3L 20484421 3` UTR ZnT77C - chr3L_9_20480001 chr3L_20480001 RAL-371_125b 1791 chr3L 20508117 20508184 chr3L 20508263 20508333 18 149 3.5 3.5 3.5 4.0 216 chr3L 20508117 intron CG32425 + chr3L 20508225 intron CG32425 + chr3L 20508333 intron CG32425 + chr3L_18_20505001 chr3L_20505001 RAL-371_125b 1792 chr3L 20525228 20525228 chr3L 24821492 24821494 4 4296265 7.0 6.0 6.5 0.5 4296266 chr3L 20525228 intron CG4825 - chr3L 22673361 intron CG14457 + chr3L 24821494 intergenic not near genes chr3L_4_22670001 chr3L_22670001 RAL-371_125b 1793 chr3L 20548314 20548382 chr3L 20548453 20548521 10 139 3.5 5.0 4.2 1.9 207 chr3L 20548314 intergenic not near genes chr3L 20548418 intergenic not near genes chr3L 20548521 intergenic not near genes chr3L_10_20545001 chr3L_20545001 RAL-371_125b 1794 chr3L 20585381 20585434 chr3L 20585520 20585573 14 139 1.5 5.5 3.5 3.1 192 chr3L 20585381 intergenic not near genes chr3L 20585477 intergenic not near genes chr3L 20585573 intergenic not near genes chr3L_14_20585001 chr3L_20585001 RAL-371_125b 1795 chr3L 20590032 20590046 chr3L 20590621 20590635 412 4 588 5.0 2.5 3.8 0.8 603 chr3L 20590032 intergenic not near genes chr3L 20590334 intergenic not near genes chr3L 20590635 intergenic not near genes chr3L_4_20590001 chr3L_20590001 RAL-371_125b 1796 chr3L 20590052 20590077 chr3L 20590619 20590666 412 6 579 2.5 2.5 2.5 1.7 614 chr3L 20590052 intergenic not near genes chr3L 20590359 intergenic not near genes chr3L 20590666 intergenic not near genes chr3L_6_20590001 chr3L_20590001 RAL-371_125b 1797 chr3L 20590079 20590084 chr3L 20590606 20590673 412 4 570 2.5 2.0 2.2 1.2 594 chr3L 20590079 intergenic not near genes chr3L 20590376 intergenic not near genes chr3L 20590673 intergenic not near genes chr3L_4_20590001 chr3L_20590001 RAL-371_125b 1798 chr3L 20616153 20616166 chr3L 20616405 20616418 5 252 0.0 7.5 3.8 1.0 265 chr3L 20616153 intron knrl - chr3L 20616286 intron knrl - chr3L 20616418 intron knrl - chr3L_5_20615001 chr3L_20615001 RAL-371_125b 1799 chr3L 20724287 20724296 chr3L 20724476 20724485 6 188 5.5 8.5 7.0 0.8 198 chr3L 20724287 intergenic not near genes chr3L 20724386 intergenic not near genes chr3L 20724485 intergenic not near genes chr3L_6_20720001 chr3L_20720001 RAL-371_125b 1800 chr3L 20724299 20724315 chr3L 20724463 20724499 4 182 5.0 8.0 6.5 0.5 200 chr3L 20724299 intergenic not near genes chr3L 20724399 intergenic not near genes chr3L 20724499 intergenic not near genes chr3L_4_20720001 chr3L_20720001 RAL-371_125b 1801 chr3L 20739446 20739504 chr3L 20739611 20739669 7 165 4.0 2.0 3.0 1.8 223 chr3L 20739446 intron CG13252 + chr3L 20739558 intron CG13252 + chr3L 20739669 intron CG13252 + chr3L_7_20735001 chr3L_20735001 RAL-371_125b 1802 chr3L 20821240 20821307 chr3L 20824901 20824968 NOF 11 3658 3.0 2.5 2.8 2.9 3728 chr3L 20821240 intron Pka-R1 + chr3L 20823104 intron Pka-R1 + chr3L 20824968 intron Pka-R1 + chr3L_11_20820001 chr3L_20820001 RAL-371_125b 1803 chr3L 20849226 20849288 chr3L 20849355 20849417 10 129 3.0 4.5 3.8 2.1 191 chr3L 20849226 intron CG32432 - chr3L 20849322 intron CG32432 - chr3L 20849417 intron CG32432 - chr3L_10_20845001 chr3L_20845001 RAL-371_125b 1804 chr3L 20883746 20883781 chr3L 20883924 20883959 5 178 3.0 3.5 3.2 1.2 213 chr3L 20883746 intron CG32432 - chr3L 20883852 intron CG32432 - chr3L 20883959 intron CG32432 - chr3L_5_20880001 chr3L_20880001 RAL-371_125b 1805 chr3L 20917054 20917114 chr3L 20917172 20917241 14 124 4.5 4.5 4.5 2.5 187 chr3L 20917054 intergenic not near genes chr3L 20917148 intergenic not near genes chr3L 20917241 intergenic not near genes chr3L_14_20915001 chr3L_20915001 RAL-371_125b 1806 chr3L 21014886 21014947 chr3L 21023394 21023434 Tirant 12 8499 5.0 4.0 4.5 2.2 8548 chr3L 21014886 intron skd - chr3L 21019160 intron skd - chr3L 21023434 intron skd - chr3L_12_21015001 chr3L_21015001 RAL-371_125b 1807 chr3L 21071324 21071384 chr3L 21071453 21071513 12 129 2.5 3.5 3.0 3.0 189 chr3L 21071324 intron siz + chr3L 21071418 intron siz + chr3L 21071513 intron siz + chr3L_12_21070001 chr3L_21070001 RAL-371_125b 1808 chr3L 21100164 21100206 chr3L 21100318 21100337 5 149 4.0 4.0 4.0 1.0 173 chr3L 21100164 5` UTR ko - chr3L 21100250 intron ko - chr3L 21100337 intron ko - chr3L_5_21100001 chr3L_21100001 RAL-371_125b 1809 chr3L 21145264 21145282 chr3L 21145394 21145412 4 130 7.0 1.0 4.0 0.8 148 chr3L 21145264 intron Ac78C - chr3L 21145338 intron Ac78C - chr3L 21145412 intron Ac78C - chr3L_4_21145001 chr3L_21145001 RAL-371_125b 1810 chr3L 21151828 21151877 chr3L 21156962 21157011 flea 13 5134 5.5 4.5 5.0 2.2 5183 chr3L 21151828 intron Ac78C - chr3L 21154420 intron Ac78C - chr3L 21157011 intron Ac78C - chr3L_13_21150001 chr3L_21150001 RAL-371_125b 1811 chr3L 21306102 21306165 chr3L 21315311 21315374 roo 12 9209 4.5 3.0 3.8 2.5 9272 chr3L 21306102 3` UTR CG7632 + chr3L 21310738 intron Pc - chr3L 21315374 3` UTR Pc - chr3L_12_21310001 chr3L_21310001 RAL-371_125b 1812 chr3L 21372690 21372736 chr3L 21379248 21379294 McClintock 14 6558 2.0 4.5 3.2 3.3 6604 chr3L 21372690 intergenic not near genes chr3L 21375992 intergenic not near genes chr3L 21379294 intergenic not near genes chr3L_14_21375001 chr3L_21375001 RAL-371_125b 1813 chr3L 21406955 21406964 chr3L 21407084 21407093 4 129 6.0 4.0 5.0 0.7 138 chr3L 21406955 intron rgn + chr3L 21407024 intron rgn + chr3L 21407093 intron rgn + chr3L_4_21405001 chr3L_21405001 RAL-371_125b 1814 chr3L 21406970 21407012 chr3L 21407099 21407133 7 125 5.0 6.5 5.8 1.0 163 chr3L 21406970 intron rgn + chr3L 21407052 intron rgn + chr3L 21407133 intron rgn + chr3L_7_21405001 chr3L_21405001 RAL-371_125b 1815 chr3L 21414489 21414537 chr3L 21414615 21414662 8 126 3.5 4.5 4.0 1.6 173 chr3L 21414489 intron rgn + chr3L 21414576 intron rgn + chr3L 21414662 intron rgn + chr3L_8_21410001 chr3L_21410001 RAL-371_125b 1816 chr3L 21415412 21415473 chr3L 21415541 21415602 14 125 3.5 2.5 3.0 3.5 190 chr3L 21415412 intron rgn + chr3L 21415507 intron rgn + chr3L 21415602 intron rgn + chr3L_14_21415001 chr3L_21415001 RAL-371_125b 1817 chr3L 21498831 21498851 chr3L 21500509 21500537 1360 5 1684 5.0 6.0 5.5 0.8 1706 chr3L 21498831 intron Glg1 - chr3L 21499684 intron Glg1 - chr3L 21500537 intron Glg1 - chr3L_5_21495001 chr3L_21495001 RAL-371_125b 1818 chr3L 21689402 21689454 chr3L 21689524 21689537 8 116 7.0 5.0 6.0 1.1 135 chr3L 21689402 intergenic not near genes chr3L 21689470 intergenic not near genes chr3L 21689537 intergenic not near genes chr3L_8_21685001 chr3L_21685001 RAL-371_125b 1819 chr3L 21742469 21742528 chr3L 21742623 21742682 12 152 4.0 2.0 3.0 3.0 213 chr3L 21742469 intergenic CG14572 + chr3L 21742576 intergenic CG14572 + chr3L 21742682 intergenic CG14572 + chr3L_12_21740001 chr3L_21740001 RAL-371_125b 1820 chr3L 21749285 21749324 chr3L 21754479 21754534 Doc 5 5207 5.5 3.0 4.2 1.0 5249 chr3L 21749285 intron Syn1 - chr3L 21751910 intron Syn1 - chr3L 21754534 intron Syn1 - chr3L_5_21750001 chr3L_21750001 RAL-371_125b 1821 chr3L 21769593 21769628 chr3L 21769689 21769756 14 117 3.0 6.0 4.5 2.5 163 chr3L 21769593 intron,intron Syn1 -,CG42689 + chr3L 21769674 intron,intron Syn1 -,CG42689 + chr3L 21769756 intron,intron Syn1 -,CG42689 + chr3L_14_21765001 chr3L_21765001 RAL-371_125b 1822 chr3L 21769998 21770035 chr3L 21770135 21770172 6 136 4.0 5.0 4.5 1.1 174 chr3L 21769998 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L 21770085 5` UTR,intron,intron Syn1 -,CG42689 +,CG7370 + chr3L 21770172 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L_6_21770001 chr3L_21770001 RAL-371_125b 1823 chr3L 21771905 21771922 chr3L 21772066 21772083 7 161 5.5 7.5 6.5 0.9 178 chr3L 21771905 intron CG42689 + chr3L 21771994 intron CG42689 + chr3L 21772083 intron CG42689 + chr3L_7_21770001 chr3L_21770001 RAL-371_125b 1824 chr3L 21776639 21776695 chr3L 21776772 21776832 5 136 0.0 1.5 0.8 2.8 193 chr3L 21776639 intron,intron CG42689 +,CG42552 + chr3L 21776736 intron,intron CG42689 +,CG42552 + chr3L 21776832 exon,intron CG42689 +,CG42552 + chr3L_5_21775001 chr3L_21775001 RAL-371_125b 1825 chr3L 21875456 21875474 chr3L 21875586 21875604 4 130 4.5 3.0 3.8 0.8 148 chr3L 21875456 intron mub + chr3L 21875530 intron mub + chr3L 21875604 intron mub + chr3L_4_21875001 chr3L_21875001 RAL-371_125b 1826 chr3L 21875480 21875513 chr3L 21875569 21875643 9 120 2.5 2.5 2.5 2.6 163 chr3L 21875480 intron mub + chr3L 21875562 intron mub + chr3L 21875643 intron mub + chr3L_9_21875001 chr3L_21875001 RAL-371_125b 1827 chr3L 22016326 22016392 chr3L 22016487 22016558 17 164 4.5 3.0 3.8 3.5 232 chr3L 22016326 intergenic not near genes chr3L 22016442 intergenic not near genes chr3L 22016558 intergenic not near genes chr3L_17_22015001 chr3L_22015001 RAL-371_125b 1828 chr3L 22033649 22033718 chr3L 22033777 22033846 17 123 4.5 4.5 4.5 3.1 197 chr3L 22033649 intergenic not near genes chr3L 22033748 intergenic not near genes chr3L 22033846 intergenic not near genes chr3L_17_22030001 chr3L_22030001 RAL-371_125b 1829 chr3L 22046151 22046198 chr3L 22046287 22046351 9 151 4.5 2.0 3.2 2.1 200 chr3L 22046151 intron Oct-TyrR + chr3L 22046251 intron Oct-TyrR + chr3L 22046351 intron Oct-TyrR + chr3L_9_22045001 chr3L_22045001 RAL-371_125b 1830 chr3L 22099637 22099695 chr3L 22105872 22105931 3S18 13 6235 5.5 5.0 5.2 2.1 6294 chr3L 22099637 intergenic not near genes chr3L 22102784 intergenic not near genes chr3L 22105931 intergenic not near genes chr3L_13_22100001 chr3L_22100001 RAL-371_125b 1831 chr3L 22124758 22124833 chr3L 22124891 22124966 15 133 2.5 1.0 1.8 5.4 208 chr3L 22124758 intergenic not near genes chr3L 22124862 intergenic not near genes chr3L 22124966 intergenic not near genes chr3L_15_22120001 chr3L_22120001 RAL-371_125b 1832 chr3L 22137493 22137535 chr3L 22137618 22137662 5 126 4.0 5.5 4.8 0.9 169 chr3L 22137493 intron olf413 + chr3L 22137578 intron olf413 + chr3L 22137662 intron olf413 + chr3L_5_22135001 chr3L_22135001 RAL-371_125b 1833 chr3L 22166410 22166458 chr3L 22166538 22166580 7 127 3.5 5.0 4.2 1.3 170 chr3L 22166410 intron olf413 + chr3L 22166495 intron olf413 + chr3L 22166580 intron olf413 + chr3L_7_22165001 chr3L_22165001 RAL-371_125b 1834 chr3L 22169411 22169483 chr3L 22169554 22169626 6 140 1.0 5.0 3.0 1.5 215 chr3L 22169411 intron olf413 + chr3L 22169518 intron olf413 + chr3L 22169626 intron olf413 + chr3L_6_22165001 chr3L_22165001 RAL-371_125b 1835 chr3L 22194299 22194316 chr3L 22194411 22194443 6 122 6.5 7.0 6.8 0.8 144 chr3L 22194299 intron olf413 + chr3L 22194371 intron olf413 + chr3L 22194443 intron olf413 + chr3L_6_22190001 chr3L_22190001 RAL-371_125b 1836 chr3L 22411351 22411387 chr3L 22411453 22411494 8 118 2.5 4.5 3.5 1.8 143 chr3L 22411351 intergenic not near genes chr3L 22411422 intergenic not near genes chr3L 22411494 intergenic not near genes chr3L_8_22410001 chr3L_22410001 RAL-371_125b 1837 chr3L 22447161 22447217 chr3L 22447302 22447358 14 141 3.0 4.5 3.8 2.9 197 chr3L 22447161 intergenic not near genes chr3L 22447260 intergenic not near genes chr3L 22447358 intergenic not near genes chr3L_14_22445001 chr3L_22445001 RAL-371_125b 1838 chr3L 22507104 22507152 chr3L 22507220 22507286 8 124 2.0 4.5 3.2 1.9 182 chr3L 22507104 intergenic not near genes chr3L 22507195 intergenic not near genes chr3L 22507286 intergenic not near genes chr3L_8_22505001 chr3L_22505001 RAL-371_125b 1839 chr3L 22522652 22522695 chr3L 22522779 22522796 12 125 6.5 4.5 5.5 1.8 144 chr3L 22522652 intergenic not near genes chr3L 22522724 intergenic not near genes chr3L 22522796 intergenic not near genes chr3L_12_22520001 chr3L_22520001 RAL-371_125b 1840 chr3L 22542853 22542911 chr3L 22543024 22543077 10 169 2.0 3.5 2.8 2.6 224 chr3L 22542853 intergenic not near genes chr3L 22542965 intergenic not near genes chr3L 22543077 intergenic not near genes chr3L_10_22540001 chr3L_22540001 RAL-371_125b 1841 chr3L 22544350 22544411 chr3L 22544477 22544538 12 126 2.5 2.5 2.5 3.4 188 chr3L 22544350 intergenic not near genes chr3L 22544444 intergenic not near genes chr3L 22544538 intergenic not near genes chr3L_12_22540001 chr3L_22540001 RAL-371_125b 1842 chr3L 22554378 22554445 chr3L 22554504 22554571 10 125 1.5 8.5 5.0 1.7 193 chr3L 22554378 intergenic not near genes chr3L 22554474 intergenic not near genes chr3L 22554571 intergenic not near genes chr3L_10_22550001 chr3L_22550001 RAL-371_125b 1843 chr3L 22555724 22555775 chr3L 22563244 22563267 blood 7 7510 3.5 0.5 2.0 2.3 7543 chr3L 22555724 intergenic not near genes chr3L 22559496 intergenic not near genes chr3L 22563267 intergenic not near genes chr3L_7_22555001 chr3L_22555001 RAL-371_125b 1844 chr3L 22569539 22569574 chr3L 22569678 22569684 5 139 4.0 4.0 4.0 1.0 145 chr3L 22569539 intergenic not near genes chr3L 22569612 intergenic not near genes chr3L 22569684 intergenic not near genes chr3L_5_22565001 chr3L_22565001 RAL-371_125b 1845 chr3L 22570380 22570451 chr3L 22570574 22570645 16 192 4.5 3.5 4.0 3.2 265 chr3L 22570380 intergenic not near genes chr3L 22570512 intergenic not near genes chr3L 22570645 intergenic not near genes chr3L_16_22570001 chr3L_22570001 RAL-371_125b 1846 chr3L 22572079 22572116 chr3L 22572200 22572232 7 124 1.5 7.0 4.2 1.3 153 chr3L 22572079 intergenic not near genes chr3L 22572156 intergenic not near genes chr3L 22572232 intergenic not near genes chr3L_7_22570001 chr3L_22570001 RAL-371_125b 1847 chr3L 22577580 22577629 chr3L 22582418 22582467 Doc 4 4838 7.0 3.5 5.2 0.6 4887 chr3L 22577580 intergenic not near genes chr3L 22580024 intergenic not near genes chr3L 22582467 3` UTR CG14459 - chr3L_4_22580001 chr3L_22580001 RAL-371_125b 1848 chr3L 22610542 22610615 chr3L 22610688 22610760 16 139 1.5 3.0 2.2 5.0 218 chr3L 22610542 intron CG14459 - chr3L 22610651 intron CG14459 - chr3L 22610760 intron CG14459 - chr3L_16_22610001 chr3L_22610001 RAL-371_125b 1849 chr3L 22617148 22617222 chr3L 22624650 22624714 blood 12 7501 4.5 6.5 5.5 1.8 7566 chr3L 22617148 intron CG14459 - chr3L 22620931 intron CG14459 - chr3L 22624714 intron CG14459 - chr3L_12_22620001 chr3L_22620001 RAL-371_125b 1850 chr3L 22664971 22665029 chr3L 22665105 22665151 7 134 3.5 0.5 2.0 2.3 180 chr3L 22664971 intergenic CR43270 - chr3L 22665061 intergenic CR43270 - chr3L 22665151 intergenic CR43270 - chr3L_7_22665001 chr3L_22665001 RAL-371_125b 1851 chr3L 22726190 22726446 chr3L 22726318 22726582 28 135 3.0 2.0 2.5 8.0 392 chr3L 22726190 3` UTR mael + chr3L 22726386 3` UTR CG14450 - chr3L 22726582 3` UTR CG14450 - chr3L_28_22725001 chr3L_22725001 RAL-371_125b 1852 chr3L 22761329 22761405 chr3L 22766822 22766885 Ivk 10 5495 0.5 3.0 1.8 3.6 5556 chr3L 22761329 intron SPoCk + chr3L 22764107 intron SPoCk + chr3L 22766885 intron SPoCk + chr3L_10_22760001 chr3L_22760001 RAL-371_125b 1853 chr3L 22778980 22779041 chr3L 22779152 22779177 7 166 1.5 2.5 2.0 2.3 197 chr3L 22778980 intron SPoCk + chr3L 22779078 intron SPoCk + chr3L 22779177 intron SPoCk + chr3L_7_22775001 chr3L_22775001 RAL-371_125b 1854 chr3L 22825504 22825558 chr3L 22825631 22825685 12 127 3.5 4.0 3.8 2.5 181 chr3L 22825504 intron jim - chr3L 22825594 intron jim - chr3L 22825685 intron jim - chr3L_12_22825001 chr3L_22825001 RAL-371_125b 1855 chr3L 22865940 22865994 chr3L 22867123 22867178 Doc 9 1178 7.5 4.5 6.0 1.3 1238 chr3L 22865940 exon CG33170 + chr3L 22866559 intron CG33170 + chr3L 22867178 intron CG33170 + chr3L_9_22865001 chr3L_22865001 RAL-371_125b 1856 chr3L 22894210 22894250 chr3L 22894354 22894394 11 143 2.5 7.0 4.8 1.9 184 chr3L 22894210 intergenic slif + chr3L 22894302 intergenic slif + chr3L 22894394 intergenic not near genes chr3L_11_22890001 chr3L_22890001 RAL-371_125b 1857 chr3L 19220633 19220637 chr3L 22908066 22908066 5 3687431 19.0 18.0 18.5 0.3 3687433 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_5_21060001 chr3L_21060001 RAL-371_125b 1858 chr3L 20525228 20525229 chr3L 22908066 22908066 5 2382837 7.0 18.0 12.5 0.4 2382838 chr3L 20525228 intron CG4825 - chr3L 21716647 intergenic not near genes chr3L 22908066 intergenic not near genes chr3L_5_21715001 chr3L_21715001 RAL-371_125b 1859 chr3L 19220633 19220636 chr3L 22908067 22908067 4 3687432 18.5 17.5 18.0 0.2 3687434 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_4_21060001 chr3L_21060001 RAL-371_125b 1860 chr3L 22909003 22909036 chr3L 22909144 22909177 6 137 2.5 10.5 6.5 0.8 174 chr3L 22909003 intergenic CR45661 + chr3L 22909090 intergenic CR45661 + chr3L 22909177 intergenic CR45661 + chr3L_6_22905001 chr3L_22905001 RAL-371_125b 1861 chr3L 22924900 22924976 chr3L 22925026 22925104 14 123 2.0 3.5 2.8 3.7 204 chr3L 22924900 intergenic not near genes chr3L 22925002 intergenic not near genes chr3L 22925104 intergenic not near genes chr3L_14_22925001 chr3L_22925001 RAL-371_125b 1862 chr3L 22962408 22962469 chr3L 22963769 22963832 INE-1 15 1368 3.0 2.0 2.5 4.3 1424 chr3L 22962408 intergenic not near genes chr3L 22963120 intergenic not near genes chr3L 22963832 intergenic not near genes chr3L_15_22960001 chr3L_22960001 RAL-371_125b 1863 chr3L 22989825 22989868 chr3L 22996849 22996892 297 13 7022 9.0 4.0 6.5 1.7 7067 chr3L 22989825 intergenic not near genes chr3L 22993358 intergenic not near genes chr3L 22996892 intergenic not near genes chr3L_13_22990001 chr3L_22990001 RAL-371_125b 1864 chr3L 22997024 22997097 chr3L 22997159 22997232 7 133 3.0 2.0 2.5 2.0 208 chr3L 22997024 intergenic not near genes chr3L 22997128 intergenic not near genes chr3L 22997232 intergenic not near genes chr3L_7_22995001 chr3L_22995001 RAL-371_125b 1865 chr3L 23018470 23018540 chr3L 23018785 23018855 11 314 3.5 6.0 4.8 1.9 385 chr3L 23018470 intron nrm + chr3L 23018662 intron nrm + chr3L 23018855 intron nrm + chr3L_11_23015001 chr3L_23015001 RAL-371_125b 1866 chr3L 23026449 23026471 chr3L 23026615 23026637 5 165 2.5 2.5 2.5 1.4 188 chr3L 23026449 intron nrm + chr3L 23026543 intron nrm + chr3L 23026637 intron nrm + chr3L_5_23025001 chr3L_23025001 RAL-371_125b 1867 chr3L 23042182 23042246 chr3L 23048985 23049055 gypsy6 9 6805 3.0 5.0 4.0 1.8 6873 chr3L 23042182 intergenic not near genes chr3L 23045618 intergenic not near genes chr3L 23049055 intergenic not near genes chr3L_9_23045001 chr3L_23045001 RAL-371_125b 1868 chr3L 23182774 23182843 chr3L 23182900 23182969 8 126 5.0 4.0 4.5 1.5 195 chr3L 23182774 intron CG34031 + chr3L 23182872 intron CG34031 + chr3L 23182969 intron CG34031 + chr3L_8_23180001 chr3L_23180001 RAL-371_125b 1869 chr3L 23205408 23205442 chr3L 23205687 23205722 5 280 6.0 2.5 4.2 1.0 314 chr3L 23205408 intergenic not near genes chr3L 23205565 intergenic not near genes chr3L 23205722 intergenic not near genes chr3L_5_23205001 chr3L_23205001 RAL-371_125b 1870 chr3L 23823993 23824010 chr3L 23824449 23824473 5 461 6.5 3.0 4.8 0.9 480 chr3L 23823993 intergenic not near genes chr3L 23824233 intergenic not near genes chr3L 23824473 intergenic not near genes chr3L_5_23820001 chr3L_23820001 RAL-371_125b 1871 chr3L 23875487 23875548 chr3L 23875618 23875679 9 130 6.0 4.0 5.0 1.5 192 chr3L 23875487 intron CG40470 - chr3L 23875583 intron CG40470 - chr3L 23875679 intron CG40470 - chr3L_9_23875001 chr3L_23875001 RAL-371_125b 1872 chr3L 24012374 24012424 chr3L 24020765 24020778 roo 7 8383 4.5 3.5 4.0 1.4 8404 chr3L 24012374 intergenic not near genes chr3L 24016576 intergenic not near genes chr3L 24020778 intergenic not near genes chr3L_7_24015001 chr3L_24015001 RAL-371_125b 1873 chr3L 24791850 24791883 chr3L 24796679 24796712 Doc 5 4829 4.5 4.0 4.2 1.0 4862 chr3L 24791850 intergenic not near genes chr3L 24794281 intergenic not near genes chr3L 24796712 intergenic not near genes chr3L_5_24790001 chr3L_24790001 RAL-371_125b 1874 chr3L 18198931 18198931 chr3L 24821493 24821493 5 6622562 0.5 6.0 3.2 1.2 6622562 chr3L 18198931 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821493 intergenic not near genes chr3L_5_21510001 chr3L_21510001 RAL-371_125b 1875 chr3L 25331626 25331651 chr3L 25331727 25331788 4 123 5.0 2.0 3.5 0.9 162 chr3L 25331626 intergenic not near genes chr3L 25331707 intergenic not near genes chr3L 25331788 intergenic not near genes chr3L_4_25330001 chr3L_25330001 RAL-371_125b 1876 chr3L 26010785 26010855 chr3L 26010919 26010943 12 127 2.0 4.5 3.2 2.9 158 chr3L 26010785 intron CG40178 - chr3L 26010864 intron CG40178 - chr3L 26010943 intron CG40178 - chr3L_12_26010001 chr3L_26010001 RAL-371_125b 1877 chr3L 27390642 27390705 chr3L 27390771 27390834 8 124 20.0 25.5 22.8 0.3 192 chr3L 27390642 intron Dbp80 + chr3L 27390738 intron Dbp80 + chr3L 27390834 intron Dbp80 + chr3L_8_27390001 chr3L_27390001 RAL-371_125b 1878 chr3R 2534100 2534151 chr3R 2541708 2541770 7 7616 9.5 11.5 10.5 0.6 7670 chr3R 2534100 intergenic not near genes chr3R 2537935 intergenic not near genes chr3R 2541770 intergenic not near genes chr3R_7_2535001 chr3R_2535001 RAL-371_125b 1879 chr3R 2556893 2556955 chr3R 2557583 2557638 9 685 15.5 17.0 16.2 0.5 745 chr3R 2556893 intron CG41056 - chr3R 2557266 intron CG41056 - chr3R 2557638 intron CG41056 - chr3R_9_2555001 chr3R_2555001 RAL-371_125b 1880 chr3R 4063765 4063774 chr3R 4069095 4069104 4 5330 6.5 13.0 9.8 0.4 5339 chr3R 4063765 intergenic not near genes chr3R 4066434 intergenic not near genes chr3R 4069104 intergenic not near genes chr3R_4_4065001 chr3R_4065001 RAL-371_125b 1881 chr3R 4132853 4132926 chr3R 4133057 4133130 15 204 3.0 1.5 2.2 4.7 277 chr3R 4132853 intron Gfat1 + chr3R 4132992 intron Gfat1 + chr3R 4133130 intron Gfat1 + chr3R_15_4130001 chr3R_4130001 RAL-371_125b 1882 chr3R 4206032 4206086 chr3R 4211657 4211711 mdg3 7 5625 6.5 2.5 4.5 1.3 5679 chr3R 4206032 intron CG14636 - chr3R 4208872 intron CG14636 - chr3R 4211711 intron CG14636 - chr3R_7_4205001 chr3R_4205001 RAL-371_125b 1883 chr3R 4366716 4366782 chr3R 4375149 4375215 roo 14 8433 4.5 5.0 4.8 2.4 8499 chr3R 4366716 3` UTR CG1090 + chr3R 4370966 intergenic not near genes chr3R 4375215 5` UTR CR44922 + chr3R_14_4370001 chr3R_4370001 RAL-371_125b 1884 chr3R 4408386 4408421 chr3R 4412738 4412775 Juan 10 4354 6.5 8.0 7.2 1.2 4389 chr3R 4408386 intron CG32944 - chr3R 4410580 intron CG32944 - chr3R 4412775 intron CG32944 - chr3R_10_4410001 chr3R_4410001 RAL-371_125b 1885 chr3R 4609519 4609569 chr3R 4610733 4610783 1360 8 1214 5.0 7.0 6.0 1.1 1264 chr3R 4609519 intergenic not near genes chr3R 4610151 intergenic not near genes chr3R 4610783 intergenic not near genes chr3R_8_4610001 chr3R_4610001 RAL-371_125b 1886 chr3R 4722298 4722314 chr3R 4722485 4722501 4 187 4.5 5.0 4.8 0.7 203 chr3R 4722298 intron Nep2 - chr3R 4722400 intron Nep2 - chr3R 4722501 intron Nep2 - chr3R_4_4720001 chr3R_4720001 RAL-371_125b 1887 chr3R 4722324 4722365 chr3R 4722483 4722552 9 184 1.5 5.0 3.2 2.1 228 chr3R 4722324 intron Nep2 - chr3R 4722438 intron Nep2 - chr3R 4722552 intron Nep2 - chr3R_9_4720001 chr3R_4720001 RAL-371_125b 1888 chr3R 4739078 4739136 chr3R 4739205 4739263 16 124 4.5 5.0 4.8 2.8 185 chr3R 4739078 intron tacc - chr3R 4739170 intron tacc - chr3R 4739263 intron tacc - chr3R_16_4735001 chr3R_4735001 RAL-371_125b 1889 chr3R 4769112 4769186 chr3R 4769240 4769314 12 127 4.0 4.0 4.0 2.4 202 chr3R 4769112 intron,intron atms +,CG44098 - chr3R 4769213 intron,intron atms +,CG44098 - chr3R 4769314 intron,intron atms +,CG44098 - chr3R_12_4765001 chr3R_4765001 RAL-371_125b 1890 chr3R 4887435 4887501 chr3R 4894862 4894928 rover 7 7425 4.0 3.0 3.5 1.6 7493 chr3R 4887435 intergenic not near genes chr3R 4891182 intergenic not near genes chr3R 4894928 intergenic not near genes chr3R_7_4890001 chr3R_4890001 RAL-371_125b 1891 chr3R 4975887 4975955 chr3R 4976038 4976106 22 151 2.5 1.5 2.0 7.3 219 chr3R 4975887 intergenic not near genes chr3R 4975996 intergenic not near genes chr3R 4976106 intergenic not near genes chr3R_22_4975001 chr3R_4975001 RAL-371_125b 1892 chr3R 5045805 5045869 chr3R 5052957 5053021 HMS-Beagle 12 7152 5.0 1.5 3.2 2.9 7216 chr3R 5045805 3` UTR CR43635 - chr3R 5049413 intergenic not near genes chr3R 5053021 intergenic CR45588 - chr3R_12_5045001 chr3R_5045001 RAL-371_125b 1893 chr3R 5067937 5068002 chr3R 5073504 5073569 mdg3 13 5567 4.5 3.5 4.0 2.6 5632 chr3R 5067937 intergenic not near genes chr3R 5070753 intergenic not near genes chr3R 5073569 intergenic not near genes chr3R_13_5070001 chr3R_5070001 RAL-371_125b 1894 chr3R 5105533 5105580 chr3R 5105636 5105694 6 113 3.0 4.0 3.5 1.3 161 chr3R 5105533 intergenic not near genes chr3R 5105614 intergenic not near genes chr3R 5105694 intergenic not near genes chr3R_6_5105001 chr3R_5105001 RAL-371_125b 1895 chr3R 5278046 5278110 chr3R 5278177 5278241 18 127 7.0 5.0 6.0 2.6 195 chr3R 5278046 intron mtd - chr3R 5278144 intron mtd - chr3R 5278241 intron mtd - chr3R_18_5275001 chr3R_5275001 RAL-371_125b 1896 chr3R 5282952 5282991 chr3R 5283076 5283119 11 124 8.5 7.5 8.0 1.2 167 chr3R 5282952 intron mtd - chr3R 5283036 intron mtd - chr3R 5283119 intron mtd - chr3R_11_5280001 chr3R_5280001 RAL-371_125b 1897 chr3R 5306107 5306138 chr3R 5306244 5306275 6 134 4.5 7.5 6.0 0.9 168 chr3R 5306107 intron mtd - chr3R 5306191 intron mtd - chr3R 5306275 intron mtd - chr3R_6_5305001 chr3R_5305001 RAL-371_125b 1898 chr3R 5306141 5306159 chr3R 5306233 5306276 4 121 2.5 6.5 4.5 0.7 135 chr3R 5306141 intron mtd - chr3R 5306208 intron mtd - chr3R 5306276 intron mtd - chr3R_4_5305001 chr3R_5305001 RAL-371_125b 1899 chr3R 5338354 5338415 chr3R 5343581 5343591 Rt1c 18 5224 6.5 5.0 5.8 2.6 5237 chr3R 5338354 intron mtd - chr3R 5340972 intron mtd - chr3R 5343591 intron mtd - chr3R_18_5340001 chr3R_5340001 RAL-371_125b 1900 chr3R 5385978 5385999 chr3R 5386169 5386220 5 212 7.0 5.5 6.2 0.7 242 chr3R 5385978 intron kkv - chr3R 5386099 intron kkv - chr3R 5386220 intron kkv - chr3R_5_5385001 chr3R_5385001 RAL-371_125b 1901 chr3R 5445918 5445985 chr3R 5452428 5452495 Burdock 11 6510 4.0 3.5 3.8 2.3 6577 chr3R 5445918 intron CG14669 + chr3R 5449206 intron CG14669 + chr3R 5452495 intron CG14669 + chr3R_11_5445001 chr3R_5445001 RAL-371_125b 1902 chr3R 5627117 5627157 chr3R 5627578 5627618 9 461 4.0 4.0 4.0 1.8 501 chr3R 5627117 intergenic not near genes chr3R 5627368 intergenic CG31551 + chr3R 5627618 intergenic CG31551 + chr3R_9_5625001 chr3R_5625001 RAL-371_125b 1903 chr3R 5726056 5726118 chr3R 5726268 5726330 9 212 2.0 2.0 2.0 3.0 274 chr3R 5726056 intergenic not near genes chr3R 5726193 intergenic not near genes chr3R 5726330 intergenic not near genes chr3R_9_5725001 chr3R_5725001 RAL-371_125b 1904 chr3R 5745993 5746041 chr3R 5746268 5746318 pogo 4 284 3.0 3.0 3.0 1.0 325 chr3R 5745993 3` UTR Madm + chr3R 5746156 3` UTR Madm + chr3R 5746318 3` UTR Madm + chr3R_4_5745001 chr3R_5745001 RAL-371_125b 1905 chr3R 5746972 5747008 chr3R 5753213 5753249 diver 8 6241 2.0 1.0 1.5 3.2 6277 chr3R 5746972 intergenic Madm + chr3R 5750110 intergenic not near genes chr3R 5753249 intergenic CG2091 - chr3R_8_5750001 chr3R_5750001 RAL-371_125b 1906 chr3R 5769201 5769264 chr3R 5769339 5769380 9 133 2.5 3.0 2.8 2.4 179 chr3R 5769201 intron CG2082 - chr3R 5769290 intron CG2082 - chr3R 5769380 intron CG2082 - chr3R_9_5765001 chr3R_5765001 RAL-371_125b 1907 chr3R 5772337 5772393 chr3R 5772545 5772601 12 207 2.0 3.5 2.8 3.2 264 chr3R 5772337 intron CG2082 - chr3R 5772469 intron CG2082 - chr3R 5772601 intron CG2082 - chr3R_12_5770001 chr3R_5770001 RAL-371_125b 1908 chr3R 5809069 5809139 chr3R 5809360 5809419 pogo 18 290 2.5 4.5 3.5 4.0 350 chr3R 5809069 3` UTR CG11000 + chr3R 5809244 3` UTR CG11000 + chr3R 5809419 3` UTR CG11000 + chr3R_18_5805001 chr3R_5805001 RAL-371_125b 1909 chr3R 5822346 5822401 chr3R 5823563 5823618 1360 16 1217 2.5 7.0 4.8 2.8 1272 chr3R 5822346 3` UTR CG2023 - chr3R 5822982 3` UTR CG2023 - chr3R 5823618 3` UTR CG2023 - chr3R_16_5820001 chr3R_5820001 RAL-371_125b 1910 chr3R 5895966 5895981 chr3R 5896219 5896235 4 259 1.0 3.0 2.0 1.3 269 chr3R 5895966 intron CG34113 - chr3R 5896100 intron CG34113 - chr3R 5896235 intron CG34113 - chr3R_4_5895001 chr3R_5895001 RAL-371_125b 1911 chr3R 5896923 5896978 chr3R 5897332 5897387 11 406 2.5 2.5 2.5 3.1 464 chr3R 5896923 intron CG34113 - chr3R 5897155 intron CG34113 - chr3R 5897387 intron CG34113 - chr3R_11_5895001 chr3R_5895001 RAL-371_125b 1912 chr3R 5927521 5927562 chr3R 5927811 5927827 pogo 11 286 5.5 4.5 5.0 1.8 306 chr3R 5927521 intron CG34113 - chr3R 5927674 intron CG34113 - chr3R 5927827 intron CG34113 - chr3R_11_5925001 chr3R_5925001 RAL-371_125b 1913 chr3R 5989307 5989355 chr3R 5989419 5989467 8 125 3.5 2.0 2.8 2.1 160 chr3R 5989307 5` UTR CR44927 + chr3R 5989387 5` UTR CR44927 + chr3R 5989467 5` UTR CR44927 + chr3R_8_5985001 chr3R_5985001 RAL-371_125b 1914 chr3R 6015574 6015578 chr3R 6015709 6015713 4 135 0.0 8.0 4.0 0.8 139 chr3R 6015574 intergenic not near genes chr3R 6015644 intergenic not near genes chr3R 6015713 intergenic not near genes chr3R_4_6015001 chr3R_6015001 RAL-371_125b 1915 chr3R 6015937 6015975 chr3R 6024450 6024506 Tirant 6 8526 2.0 3.0 2.5 1.7 8569 chr3R 6015937 intergenic not near genes chr3R 6020222 intergenic not near genes chr3R 6024506 intergenic not near genes chr3R_6_6020001 chr3R_6020001 RAL-371_125b 1916 chr3R 6048400 6048467 chr3R 6048533 6048600 13 129 2.5 4.5 3.5 2.9 200 chr3R 6048400 intergenic not near genes chr3R 6048500 intergenic not near genes chr3R 6048600 intergenic not near genes chr3R_13_6045001 chr3R_6045001 RAL-371_125b 1917 chr3R 6121152 6121180 chr3R 6121387 6121448 BS 4 252 0.0 1.5 0.8 2.2 296 chr3R 6121152 intergenic not near genes chr3R 6121300 intergenic not near genes chr3R 6121448 intergenic not near genes chr3R_4_6120001 chr3R_6120001 RAL-371_125b 1918 chr3R 6123623 6123692 chr3R 6127374 6127443 11 3749 0.5 5.0 2.8 2.9 3820 chr3R 6123623 3` UTR Vha14-2 + chr3R 6125533 intergenic not near genes chr3R 6127443 intron CR43487 - chr3R_11_6125001 chr3R_6125001 RAL-371_125b 1919 chr3R 6158036 6158093 chr3R 6158300 6158357 7 264 3.5 3.5 3.5 1.6 321 chr3R 6158036 intergenic not near genes chr3R 6158196 intergenic not near genes chr3R 6158357 intergenic not near genes chr3R_7_6155001 chr3R_6155001 RAL-371_125b 1920 chr3R 6158508 6158529 chr3R 6167116 6167162 Tirant 6 8620 3.0 3.5 3.2 1.4 8654 chr3R 6158508 intergenic not near genes chr3R 6162835 intergenic not near genes chr3R 6167162 intergenic CG1077 + chr3R_6_6160001 chr3R_6160001 RAL-371_125b 1921 chr3R 6174241 6174299 chr3R 6174416 6174425 18 179 4.0 5.0 4.5 3.3 184 chr3R 6174241 exon Osi1 + chr3R 6174333 exon Osi1 + chr3R 6174425 exon Osi1 + chr3R_18_6170001 chr3R_6170001 RAL-371_125b 1922 chr3R 6175127 6175190 chr3R 6182449 6182512 HMS-Beagle2 7 7320 3.5 2.5 3.0 1.8 7385 chr3R 6175127 intergenic Osi1 + chr3R 6178820 intron CR45194 + chr3R 6182512 intergenic CR45194 + chr3R_7_6175001 chr3R_6175001 RAL-371_125b 1923 chr3R 6186482 6186536 chr3R 6186614 6186668 13 130 7.0 5.0 6.0 1.9 186 chr3R 6186482 intergenic not near genes chr3R 6186575 intergenic not near genes chr3R 6186668 intergenic not near genes chr3R_13_6185001 chr3R_6185001 RAL-371_125b 1924 chr3R 6191128 6191184 chr3R 6191258 6191314 12 129 4.0 2.5 3.2 2.9 186 chr3R 6191128 intron NPFR + chr3R 6191221 intron NPFR + chr3R 6191314 intron NPFR + chr3R_12_6190001 chr3R_6190001 RAL-371_125b 1925 chr3R 6192935 6192991 chr3R 6193126 6193182 7 191 1.5 3.5 2.5 2.0 247 chr3R 6192935 intron NPFR + chr3R 6193058 intron NPFR + chr3R 6193182 intron NPFR + chr3R_7_6190001 chr3R_6190001 RAL-371_125b 1926 chr3R 6206276 6206298 chr3R 6206512 6206565 BS 8 255 5.5 6.0 5.8 1.2 289 chr3R 6206276 exon Osi24 + chr3R 6206420 intron Osi24 + chr3R 6206565 intron Osi24 + chr3R_8_6205001 chr3R_6205001 RAL-371_125b 1927 chr3R 6282765 6282835 chr3R 6282944 6283014 23 178 3.0 3.0 3.0 5.8 249 chr3R 6282765 intergenic Osi12 + chr3R 6282890 intergenic Osi12 + chr3R 6283014 intergenic not near genes chr3R_23_6280001 chr3R_6280001 RAL-371_125b 1928 chr3R 6338955 6339008 chr3R 6339192 6339249 12 239 5.0 5.0 5.0 2.0 294 chr3R 6338955 intergenic not near genes chr3R 6339102 intergenic not near genes chr3R 6339249 intergenic not near genes chr3R_12_6335001 chr3R_6335001 RAL-371_125b 1929 chr3R 6461560 6461597 chr3R 6461690 6461727 6 130 1.5 5.5 3.5 1.3 167 chr3R 6461560 intergenic not near genes chr3R 6461644 intergenic not near genes chr3R 6461727 intergenic not near genes chr3R_6_6460001 chr3R_6460001 RAL-371_125b 1930 chr3R 6509982 6510039 chr3R 6515113 6515170 jockey 6 5131 2.5 5.0 3.8 1.2 5188 chr3R 6509982 intergenic not near genes chr3R 6512576 intergenic not near genes chr3R 6515170 intergenic not near genes chr3R_6_6510001 chr3R_6510001 RAL-371_125b 1931 chr3R 6523287 6523338 chr3R 6523713 6523764 7 425 2.5 3.5 3.0 1.8 477 chr3R 6523287 intergenic not near genes chr3R 6523526 intergenic not near genes chr3R 6523764 intergenic not near genes chr3R_7_6520001 chr3R_6520001 RAL-371_125b 1932 chr3R 6526816 6526868 chr3R 6526969 6527021 10 152 2.5 2.5 2.5 2.9 205 chr3R 6526816 intergenic not near genes chr3R 6526918 intergenic not near genes chr3R 6527021 intergenic CG15185 + chr3R_10_6525001 chr3R_6525001 RAL-371_125b 1933 chr3R 6737458 6737520 chr3R 6739295 6739339 Doc 8 1826 3.0 4.5 3.8 1.7 1881 chr3R 6737458 intron pb - chr3R 6738398 intron pb - chr3R 6739339 intron pb - chr3R_8_6735001 chr3R_6735001 RAL-371_125b 1934 chr3R 6856349 6856394 chr3R 6856516 6856561 7 167 3.0 3.5 3.2 1.7 212 chr3R 6856349 intergenic not near genes chr3R 6856455 intergenic not near genes chr3R 6856561 intergenic not near genes chr3R_7_6855001 chr3R_6855001 RAL-371_125b 1935 chr3R 6891238 6891245 chr3R 6891312 6891350 4 94 1.0 6.5 3.8 0.8 112 chr3R 6891238 intergenic not near genes chr3R 6891294 intergenic not near genes chr3R 6891350 intergenic not near genes chr3R_4_6890001 chr3R_6890001 RAL-371_125b 1936 chr3R 6918021 6918086 chr3R 6918149 6918214 8 128 3.0 1.0 2.0 2.7 193 chr3R 6918021 intron Antp - chr3R 6918118 intron Antp - chr3R 6918214 intron Antp - chr3R_8_6915001 chr3R_6915001 RAL-371_125b 1937 chr3R 7026817 7026842 chr3R 7026952 7026978 6 136 7.0 3.5 5.2 1.0 161 chr3R 7026817 intergenic not near genes chr3R 7026898 intergenic not near genes chr3R 7026978 intergenic not near genes chr3R_6_7025001 chr3R_7025001 RAL-371_125b 1938 chr3R 7026843 7026859 chr3R 7026944 7026995 4 127 6.0 3.5 4.8 0.7 152 chr3R 7026843 intergenic not near genes chr3R 7026919 intergenic not near genes chr3R 7026995 intergenic not near genes chr3R_4_7025001 chr3R_7025001 RAL-371_125b 1939 chr3R 7092751 7092810 chr3R 7093364 7093424 11 611 3.0 2.5 2.8 2.9 673 chr3R 7092751 3` UTR CR43685 - chr3R 7093088 intron CR43685 - chr3R 7093424 3` UTR CR43685 - chr3R_11_7090001 chr3R_7090001 RAL-371_125b 1940 chr3R 7103235 7103309 chr3R 7103361 7103389 5 112 2.5 4.0 3.2 1.2 154 chr3R 7103235 intron Alh - chr3R 7103312 intron Alh - chr3R 7103389 intron Alh - chr3R_5_7100001 chr3R_7100001 RAL-371_125b 1941 chr3R 7126471 7126513 chr3R 7126616 7126642 6 142 2.0 3.0 2.5 1.7 171 chr3R 7126471 3` UTR,3` UTR CG10098 +,CG10068 - chr3R 7126556 3` UTR CG10068 - chr3R 7126642 3` UTR CG10068 - chr3R_6_7125001 chr3R_7125001 RAL-371_125b 1942 chr3R 7210555 7210604 chr3R 7210682 7210740 4 129 0.0 2.5 1.2 1.8 185 chr3R 7210555 intergenic not near genes chr3R 7210648 intergenic not near genes chr3R 7210740 intergenic not near genes chr3R_4_7210001 chr3R_7210001 RAL-371_125b 1943 chr3R 7217420 7217483 chr3R 7217691 7217754 10 270 2.0 8.0 5.0 1.7 334 chr3R 7217420 intergenic CG14605 -,CG14606 - chr3R 7217587 intergenic CG14605 - chr3R 7217754 exon CG14605 - chr3R_10_7215001 chr3R_7215001 RAL-371_125b 1944 chr3R 7396328 7396384 chr3R 7396481 7396537 10 153 1.5 4.5 3.0 2.5 209 chr3R 7396328 intergenic not near genes chr3R 7396432 intergenic not near genes chr3R 7396537 intergenic not near genes chr3R_10_7395001 chr3R_7395001 RAL-371_125b 1945 chr3R 7447949 7448006 chr3R 7448077 7448134 5 128 1.5 4.5 3.0 1.2 185 chr3R 7447949 intergenic not near genes chr3R 7448042 intergenic not near genes chr3R 7448134 intergenic not near genes chr3R_5_7445001 chr3R_7445001 RAL-371_125b 1946 chr3R 7511721 7511795 chr3R 7511852 7511864 11 125 0.5 1.5 1.0 5.5 143 chr3R 7511721 intron alpha-Est8 - chr3R 7511792 intron alpha-Est8 - chr3R 7511864 intron alpha-Est8 - chr3R_11_7510001 chr3R_7510001 RAL-371_125b 1947 chr3R 7617944 7618011 chr3R 7618086 7618153 9 140 6.0 3.5 4.8 1.6 209 chr3R 7617944 intron CG34127 - chr3R 7618048 intron CG34127 - chr3R 7618153 intron CG34127 - chr3R_9_7615001 chr3R_7615001 RAL-371_125b 1948 chr3R 7621491 7621549 chr3R 7621631 7621689 8 140 1.0 1.0 1.0 4.0 198 chr3R 7621491 intron CG34127 - chr3R 7621590 intron CG34127 - chr3R 7621689 intron CG34127 - chr3R_8_7620001 chr3R_7620001 RAL-371_125b 1949 chr3R 7677875 7677938 chr3R 7678038 7678101 5 158 0.0 3.0 1.5 2.0 226 chr3R 7677875 intron Nlg1 + chr3R 7677988 intron Nlg1 + chr3R 7678101 intron Nlg1 + chr3R_5_7675001 chr3R_7675001 RAL-371_125b 1950 chr3R 7694535 7694591 chr3R 7713646 7713702 invader3 6 19110 5.5 3.0 4.2 1.2 19167 chr3R 7694535 3` UTR Nlg1 + chr3R 7704118 intergenic not near genes chr3R 7713702 intergenic not near genes chr3R_6_7700001 chr3R_7700001 RAL-371_125b 1951 chr3R 7729424 7729489 chr3R 7737412 7737477 Stalker2 13 7985 3.0 2.0 2.5 3.7 8053 chr3R 7729424 intergenic not near genes chr3R 7733450 intergenic not near genes chr3R 7737477 intergenic not near genes chr3R_13_7730001 chr3R_7730001 RAL-371_125b 1952 chr3R 7760216 7760275 chr3R 7760775 7760834 13 559 3.0 5.5 4.2 2.5 618 chr3R 7760216 intron Sp7 + chr3R 7760525 intron Sp7 + chr3R 7760834 5` UTR Sp7 + chr3R_13_7760001 chr3R_7760001 RAL-371_125b 1953 chr3R 7775873 7775943 chr3R 7776004 7776072 11 131 5.0 2.5 3.8 2.3 199 chr3R 7775873 intergenic not near genes chr3R 7775972 intergenic not near genes chr3R 7776072 intergenic not near genes chr3R_11_7775001 chr3R_7775001 RAL-371_125b 1954 chr3R 7955901 7955955 chr3R 7956028 7956082 9 127 1.5 4.5 3.0 2.2 181 chr3R 7955901 intron dsx - chr3R 7955992 intron dsx - chr3R 7956082 intron dsx - chr3R_9_7955001 chr3R_7955001 RAL-371_125b 1955 chr3R 7965274 7965320 chr3R 7965412 7965458 7 138 3.0 7.0 5.0 1.2 184 chr3R 7965274 intron dsx - chr3R 7965366 intron dsx - chr3R 7965458 intron dsx - chr3R_7_7965001 chr3R_7965001 RAL-371_125b 1956 chr3R 7973289 7973341 chr3R 7974403 7974455 1360 6 1113 3.0 4.0 3.5 1.3 1166 chr3R 7973289 intergenic not near genes chr3R 7973872 intergenic not near genes chr3R 7974455 3` UTR CD98hc - chr3R_6_7970001 chr3R_7970001 RAL-371_125b 1957 chr3R 8090233 8090298 chr3R 8090460 8090525 11 227 4.5 5.0 4.8 1.9 292 chr3R 8090233 5` UTR CR44330 + chr3R 8090379 intergenic CR44330 + chr3R 8090525 intergenic CR44330 + chr3R_11_8090001 chr3R_8090001 RAL-371_125b 1958 chr3R 8090515 8090562 chr3R 8094042 8094079 297 5 3525 4.5 5.5 5.0 0.8 3564 chr3R 8090515 intergenic CR44330 + chr3R 8092297 intergenic not near genes chr3R 8094079 intergenic CG7900 + chr3R_5_8090001 chr3R_8090001 RAL-371_125b 1959 chr3R 8094365 8094427 chr3R 8099720 8099782 Transpac 10 5355 4.0 2.5 3.2 2.4 5417 chr3R 8094365 intron CG7900 + chr3R 8097074 intron CG7900 + chr3R 8099782 intron CG7900 + chr3R_10_8095001 chr3R_8095001 RAL-371_125b 1960 chr3R 8101720 8101755 chr3R 8104854 8104889 G2 6 3134 2.5 2.0 2.2 1.9 3169 chr3R 8101720 exon CG7900 + chr3R 8103304 intron CG7900 + chr3R 8104889 3` UTR CG7900 + chr3R_6_8100001 chr3R_8100001 RAL-371_125b 1961 chr3R 8207511 8207581 chr3R 8208406 8208435 F-element 11 883 1.0 1.5 1.2 5.0 924 chr3R 8207511 intergenic not near genes chr3R 8207973 intergenic not near genes chr3R 8208435 intergenic not near genes chr3R_11_8205001 chr3R_8205001 RAL-371_125b 1962 chr3R 8261890 8261962 chr3R 8262111 8262183 20 222 20.5 20.5 20.5 0.9 293 chr3R 8261890 intergenic RpA-70 - chr3R 8262036 intergenic RpA-70 - chr3R 8262183 3` UTR RpA-70 - chr3R_20_8260001 chr3R_8260001 RAL-371_125b 1963 chr3R 8273707 8273743 chr3R 8273844 8273880 8 137 4.0 4.5 4.2 1.5 173 chr3R 8273707 intergenic not near genes chr3R 8273794 intergenic not near genes chr3R 8273880 intergenic not near genes chr3R_8_8270001 chr3R_8270001 RAL-371_125b 1964 chr3R 8339246 8339247 chr3R 21907534 21907536 17 13568288 14.5 11.5 13.0 1.2 13568290 chr3R 8339246 intergenic not near genes chr3R 15123391 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_17_15120001 chr3R_15120001 RAL-371_125b 1965 chr3R 8393528 8393600 chr3R 8393662 8393734 13 124 4.0 5.0 4.5 2.4 206 chr3R 8393528 intron CG45263 - chr3R 8393631 intron CG45263 - chr3R 8393734 intron CG45263 - chr3R_13_8390001 chr3R_8390001 RAL-371_125b 1966 chr3R 8401958 8402020 chr3R 8402134 8402201 11 179 6.0 1.0 3.5 2.4 243 chr3R 8401958 intron CG45263 - chr3R 8402080 intron CG45263 - chr3R 8402201 intron CG45263 - chr3R_11_8400001 chr3R_8400001 RAL-371_125b 1967 chr3R 8402995 8403034 chr3R 8412181 8412250 roo 9 9208 4.5 2.5 3.5 2.0 9255 chr3R 8402995 intron CG45263 - chr3R 8407622 intron CG45263 - chr3R 8412250 intron CG45263 - chr3R_9_8405001 chr3R_8405001 RAL-371_125b 1968 chr3R 8467951 8468015 chr3R 8468088 8468136 12 132 2.5 2.5 2.5 3.4 185 chr3R 8467951 intron CG45263 - chr3R 8468044 intron CG45263 - chr3R 8468136 intron CG45263 - chr3R_12_8465001 chr3R_8465001 RAL-371_125b 1969 chr3R 8552326 8552390 chr3R 8552456 8552520 14 128 4.5 4.5 4.5 2.5 194 chr3R 8552326 intergenic Or85d + chr3R 8552423 intergenic Or85d + chr3R 8552520 intergenic Or85d + chr3R_14_8550001 chr3R_8550001 RAL-371_125b 1970 chr3R 8570435 8570497 chr3R 8575121 8575183 HMS-Beagle 13 4681 2.0 6.0 4.0 2.6 4748 chr3R 8570435 intergenic not near genes chr3R 8572809 intergenic not near genes chr3R 8575183 intergenic not near genes chr3R_13_8570001 chr3R_8570001 RAL-371_125b 1971 chr3R 8601733 8601791 chr3R 8610936 8610977 roo 10 9195 3.0 3.0 3.0 2.5 9244 chr3R 8601733 intron 5-HT2B + chr3R 8606355 intron 5-HT2B + chr3R 8610977 intron 5-HT2B + chr3R_10_8605001 chr3R_8605001 RAL-371_125b 1972 chr3R 8621497 8621505 chr3R 8621624 8621624 4 125 9.5 5.0 7.2 0.5 127 chr3R 8621497 intron 5-HT2B + chr3R 8621560 intron 5-HT2B + chr3R 8621624 intron 5-HT2B + chr3R_4_8620001 chr3R_8620001 RAL-371_125b 1973 chr3R 8707312 8707361 chr3R 8709803 8709848 jockey 11 2489 5.0 5.0 5.0 1.8 2536 chr3R 8707312 intergenic not near genes chr3R 8708580 intergenic not near genes chr3R 8709848 intergenic not near genes chr3R_11_8705001 chr3R_8705001 RAL-371_125b 1974 chr3R 8898186 8898207 chr3R 8913816 8913837 297 5 15630 7.5 4.0 5.8 0.7 15651 chr3R 8898186 intron pyd - chr3R 8906012 intron pyd - chr3R 8913837 intron pyd - chr3R_5_8905001 chr3R_8905001 RAL-371_125b 1975 chr3R 8948105 8948152 chr3R 8948231 8948278 6 126 3.0 1.0 2.0 2.0 173 chr3R 8948105 intergenic not near genes chr3R 8948192 intergenic not near genes chr3R 8948278 intergenic not near genes chr3R_6_8945001 chr3R_8945001 RAL-371_125b 1976 chr3R 8967542 8967572 chr3R 8967655 8967662 6 115 9.0 6.5 7.8 0.7 120 chr3R 8967542 intergenic not near genes chr3R 8967602 intergenic not near genes chr3R 8967662 intergenic not near genes chr3R_6_8965001 chr3R_8965001 RAL-371_125b 1977 chr3R 9036332 9036387 chr3R 9036460 9036515 13 128 3.5 5.5 4.5 2.4 183 chr3R 9036332 intron neur - chr3R 9036424 intron neur - chr3R 9036515 intron neur - chr3R_13_9035001 chr3R_9035001 RAL-371_125b 1978 chr3R 9101803 9101852 chr3R 9101951 9102000 9 145 2.5 5.5 4.0 1.8 197 chr3R 9101803 intron pum - chr3R 9101902 intron pum - chr3R 9102000 intron pum - chr3R_9_9100001 chr3R_9100001 RAL-371_125b 1979 chr3R 9108820 9108881 chr3R 9108946 9109007 12 124 2.0 4.0 3.0 3.0 187 chr3R 9108820 intron pum - chr3R 9108914 intron pum - chr3R 9109007 intron pum - chr3R_12_9105001 chr3R_9105001 RAL-371_125b 1980 chr3R 9141131 9141188 chr3R 9141270 9141310 11 134 2.5 5.5 4.0 2.2 179 chr3R 9141131 intron pum - chr3R 9141220 intron pum - chr3R 9141310 intron pum - chr3R_11_9140001 chr3R_9140001 RAL-371_125b 1981 chr3R 9168938 9168999 chr3R 9169698 9169759 17 759 4.0 4.5 4.2 3.3 821 chr3R 9168938 intron pum - chr3R 9169348 intron pum - chr3R 9169759 intron pum - chr3R_17_9165001 chr3R_9165001 RAL-371_125b 1982 chr3R 9180829 9180878 chr3R 9181255 9181309 9 430 1.0 3.5 2.2 2.8 480 chr3R 9180829 intron pum - chr3R 9181069 intron pum - chr3R 9181309 intron pum - chr3R_9_9180001 chr3R_9180001 RAL-371_125b 1983 chr3R 9192018 9192053 chr3R 9192143 9192188 8 134 4.5 3.5 4.0 1.6 170 chr3R 9192018 intron pum - chr3R 9192103 intron pum - chr3R 9192188 intron pum - chr3R_8_9190001 chr3R_9190001 RAL-371_125b 1984 chr3R 9278754 9278799 chr3R 9284060 9284109 Rt1a 12 5309 8.5 4.5 6.5 1.6 5355 chr3R 9278754 intergenic not near genes chr3R 9281432 intergenic not near genes chr3R 9284109 intergenic not near genes chr3R_12_9280001 chr3R_9280001 RAL-371_125b 1985 chr3R 9284837 9284899 chr3R 9284971 9285033 11 134 3.5 4.0 3.8 2.3 196 chr3R 9284837 intergenic not near genes chr3R 9284935 intergenic not near genes chr3R 9285033 intergenic not near genes chr3R_11_9280001 chr3R_9280001 RAL-371_125b 1986 chr3R 9319541 9319589 chr3R 9320026 9320074 jockey 13 485 4.5 6.5 5.5 2.0 533 chr3R 9319541 intron CG8861 - chr3R 9319808 intron CG8861 - chr3R 9320074 intron CG8861 - chr3R_13_9315001 chr3R_9315001 RAL-371_125b 1987 chr3R 9361807 9361811 chr3R 9362098 9362102 pogo 4 291 5.0 7.5 6.2 0.6 295 chr3R 9361807 3` UTR CG45050 + chr3R 9361954 3` UTR CG45050 + chr3R 9362102 3` UTR CG45050 + chr3R_4_9360001 chr3R_9360001 RAL-371_125b 1988 chr3R 9361818 9361835 chr3R 9362063 9362126 pogo 5 282 4.0 5.0 4.5 0.9 308 chr3R 9361818 3` UTR CG45050 + chr3R 9361972 3` UTR CG45050 + chr3R 9362126 3` UTR CG45050 + chr3R_5_9360001 chr3R_9360001 RAL-371_125b 1989 chr3R 9362952 9363002 chr3R 9363091 9363141 10 139 2.0 6.5 4.2 1.9 189 chr3R 9362952 3` UTR CG45050 + chr3R 9363046 intergenic CG45050 +,CG18473 + chr3R 9363141 intergenic CG45050 +,CG18473 + chr3R_10_9360001 chr3R_9360001 RAL-371_125b 1990 chr3R 9382774 9382834 chr3R 9382949 9383009 10 175 3.0 2.0 2.5 2.9 235 chr3R 9382774 intron FER - chr3R 9382892 intron FER - chr3R 9383009 intron FER - chr3R_10_9380001 chr3R_9380001 RAL-371_125b 1991 chr3R 9434973 9435027 chr3R 9435219 9435273 10 244 1.0 2.5 1.8 3.6 300 chr3R 9434973 intron ps + chr3R 9435123 intron ps + chr3R 9435273 intron ps + chr3R_10_9435001 chr3R_9435001 RAL-371_125b 1992 chr3R 9599763 9599839 chr3R 9599987 9600052 16 222 3.5 5.0 4.2 3.1 289 chr3R 9599763 intron CG8312 + chr3R 9599908 intron CG8312 + chr3R 9600052 intron CG8312 + chr3R_16_9595001 chr3R_9595001 RAL-371_125b 1993 chr3R 9611836 9611860 chr3R 9611968 9611992 5 132 4.5 0.0 2.2 1.6 156 chr3R 9611836 intron CG8312 + chr3R 9611914 intron CG8312 + chr3R 9611992 intron CG8312 + chr3R_5_9610001 chr3R_9610001 RAL-371_125b 1994 chr3R 9699934 9699985 chr3R 9700073 9700124 1360 16 137 8.0 3.0 5.5 2.5 190 chr3R 9699934 intron Unc-115a - chr3R 9700029 intron Unc-115a - chr3R 9700124 intron Unc-115a - chr3R_16_9700001 chr3R_9700001 RAL-371_125b 1995 chr3R 9739884 9739937 chr3R 9741880 9741932 12 1992 13.0 17.0 15.0 0.8 2048 chr3R 9739884 5` UTR CG12950 - chr3R 9740908 5` UTR Pnn + chr3R 9741932 exon Pnn + chr3R_12_9740001 chr3R_9740001 RAL-371_125b 1996 chr3R 9739254 9739307 chr3R 9742271 9742324 10 3017 28.5 17.5 23.0 0.4 3070 chr3R 9739254 exon CG12950 - chr3R 9740789 intergenic Pnn + chr3R 9742324 3` UTR Pnn + chr3R_10_9740001 chr3R_9740001 RAL-371_125b 1997 chr3R 9829360 9829432 chr3R 9829495 9829567 14 135 2.5 2.0 2.2 4.4 207 chr3R 9829360 intron Teh1 - chr3R 9829464 intron Teh1 - chr3R 9829567 intron Teh1 - chr3R_14_9825001 chr3R_9825001 RAL-371_125b 1998 chr3R 9836836 9836850 chr3R 9836969 9836987 5 137 5.5 6.5 6.0 0.7 151 chr3R 9836836 intron Teh1 - chr3R 9836912 intron Teh1 - chr3R 9836987 intron Teh1 - chr3R_5_9835001 chr3R_9835001 RAL-371_125b 1999 chr3R 9836851 9836894 chr3R 9836967 9837032 10 127 3.0 5.5 4.2 1.9 181 chr3R 9836851 intron Teh1 - chr3R 9836942 intron Teh1 - chr3R 9837032 intron Teh1 - chr3R_10_9835001 chr3R_9835001 RAL-371_125b 2000 chr3R 9898738 9898818 chr3R 9898880 9898960 16 142 1.0 3.0 2.0 5.3 222 chr3R 9898738 intron Glut4EF + chr3R 9898849 intron Glut4EF + chr3R 9898960 intron Glut4EF + chr3R_16_9895001 chr3R_9895001 RAL-371_125b 2001 chr3R 9915559 9915588 chr3R 9915686 9915715 6 126 3.5 8.0 5.8 0.9 156 chr3R 9915559 intron Glut4EF + chr3R 9915637 intron Glut4EF + chr3R 9915715 intron Glut4EF + chr3R_6_9915001 chr3R_9915001 RAL-371_125b 2002 chr3R 10073732 10073795 chr3R 10073891 10073954 9 159 2.5 1.0 1.8 3.2 222 chr3R 10073732 3` UTR nerfin-2 + chr3R 10073843 3` UTR CG5361 - chr3R 10073954 exon CG5361 - chr3R_9_10070001 chr3R_10070001 RAL-371_125b 2003 chr3R 10178205 10178232 chr3R 10178332 10178359 9 126 7.0 3.5 5.2 1.5 154 chr3R 10178205 intron CG12814 - chr3R 10178282 intron CG12814 - chr3R 10178359 intron CG12814 - chr3R_9_10175001 chr3R_10175001 RAL-371_125b 2004 chr3R 10192237 10192293 chr3R 10192473 10192529 10 236 6.5 4.0 5.2 1.6 292 chr3R 10192237 intron Syn + chr3R 10192383 intron Syn + chr3R 10192529 intron Syn + chr3R_10_10190001 chr3R_10190001 RAL-371_125b 2005 chr3R 10196912 10196925 chr3R 10202949 10202962 297 5 6037 10.0 4.0 7.0 0.6 6050 chr3R 10196912 exon Syn + chr3R 10199937 intron Syn + chr3R 10202962 intron Syn + chr3R_5_10195001 chr3R_10195001 RAL-371_125b 2006 chr3R 10231742 10231806 chr3R 10237369 10237433 mdg3 18 5626 4.0 3.5 3.8 3.8 5691 chr3R 10231742 intron CG42795 + chr3R 10234588 intron CG42795 + chr3R 10237433 intron CG42795 + chr3R_18_10230001 chr3R_10230001 RAL-371_125b 2007 chr3R 10255352 10255382 chr3R 10260842 10260862 I-element 4 5488 6.5 6.0 6.2 0.6 5510 chr3R 10255352 3` UTR Sirt6 - chr3R 10258107 intron Sirt6 - chr3R 10260862 exon Sirt6 - chr3R_4_10255001 chr3R_10255001 RAL-371_125b 2008 chr3R 10264980 10265030 chr3R 10265116 10265166 12 136 3.5 4.0 3.8 2.5 186 chr3R 10264980 intron CG43143 + chr3R 10265073 intron CG43143 + chr3R 10265166 intron CG43143 + chr3R_12_10265001 chr3R_10265001 RAL-371_125b 2009 chr3R 10277088 10277153 chr3R 10277218 10277283 19 129 4.5 3.0 3.8 4.0 195 chr3R 10277088 intron CG43143 + chr3R 10277186 intron CG43143 + chr3R 10277283 intron CG43143 + chr3R_19_10275001 chr3R_10275001 RAL-371_125b 2010 chr3R 10308324 10308380 chr3R 10308460 10308516 13 133 4.0 3.0 3.5 2.9 192 chr3R 10308324 3` UTR,3` UTR CG43143 +,CG6293 - chr3R 10308420 3` UTR,3` UTR CG43143 +,CG6293 - chr3R 10308516 3` UTR CG6293 - chr3R_13_10305001 chr3R_10305001 RAL-371_125b 2011 chr3R 10420640 10420655 chr3R 10420766 10420777 4 125 4.0 6.0 5.0 0.7 137 chr3R 10420640 intergenic not near genes chr3R 10420708 intergenic not near genes chr3R 10420777 intergenic not near genes chr3R_4_10420001 chr3R_10420001 RAL-371_125b 2012 chr3R 10531830 10531870 chr3R 10531961 10532001 9 127 3.5 0.0 1.8 3.2 171 chr3R 10531830 intron hth - chr3R 10531916 intron hth - chr3R 10532001 intron hth - chr3R_9_10530001 chr3R_10530001 RAL-371_125b 2013 chr3R 10561757 10561818 chr3R 10561897 10561952 11 135 2.5 2.5 2.5 3.1 195 chr3R 10561757 intron hth - chr3R 10561854 intron hth - chr3R 10561952 exon hth - chr3R_11_10560001 chr3R_10560001 RAL-371_125b 2014 chr3R 10577126 10577180 chr3R 10577264 10577318 8 138 1.0 1.5 1.2 3.6 192 chr3R 10577126 intron hth - chr3R 10577222 intron hth - chr3R 10577318 intron hth - chr3R_8_10575001 chr3R_10575001 RAL-371_125b 2015 chr3R 10609315 10609372 chr3R 10609453 10609510 4 138 1.5 0.5 1.0 2.0 195 chr3R 10609315 intron hth - chr3R 10609412 intron hth - chr3R 10609510 intron hth - chr3R_4_10605001 chr3R_10605001 RAL-371_125b 2016 chr3R 10641547 10641620 chr3R 10641677 10641700 10 120 3.5 5.0 4.2 1.9 153 chr3R 10641547 5` UTR CR44018 + chr3R 10641624 5` UTR CR44018 + chr3R 10641700 5` UTR CR44018 + chr3R_10_10640001 chr3R_10640001 RAL-371_125b 2017 chr3R 10673608 10673679 chr3R 10673734 10673791 7 124 1.5 2.0 1.8 2.5 183 chr3R 10673608 intergenic not near genes chr3R 10673700 intergenic not near genes chr3R 10673791 intergenic not near genes chr3R_7_10670001 chr3R_10670001 RAL-371_125b 2018 chr3R 10727622 10727636 chr3R 10727725 10727766 4 118 7.5 2.0 4.8 0.7 144 chr3R 10727622 intergenic not near genes chr3R 10727694 intergenic not near genes chr3R 10727766 intergenic not near genes chr3R_4_10725001 chr3R_10725001 RAL-371_125b 2019 chr3R 10727647 10727673 chr3R 10727721 10727803 7 117 4.0 2.5 3.2 1.7 156 chr3R 10727647 intergenic not near genes chr3R 10727725 intergenic not near genes chr3R 10727803 intergenic not near genes chr3R_7_10725001 chr3R_10725001 RAL-371_125b 2020 chr3R 10732276 10732341 chr3R 10733198 10733263 21 922 2.0 4.5 3.2 5.0 987 chr3R 10732276 intergenic not near genes chr3R 10732770 intergenic not near genes chr3R 10733263 intergenic not near genes chr3R_21_10730001 chr3R_10730001 RAL-371_125b 2021 chr3R 10745394 10745454 chr3R 10745521 10745561 8 131 1.0 4.0 2.5 2.3 167 chr3R 10745394 intron TkR86C - chr3R 10745478 intron TkR86C - chr3R 10745561 intron TkR86C - chr3R_8_10745001 chr3R_10745001 RAL-371_125b 2022 chr3R 10817182 10817244 chr3R 10817315 10817377 9 133 3.5 1.5 2.5 2.6 195 chr3R 10817182 3` UTR CG4089 + chr3R 10817280 3` UTR CG4089 + chr3R 10817377 3` UTR CG4089 + chr3R_9_10815001 chr3R_10815001 RAL-371_125b 2023 chr3R 10870849 10870894 chr3R 10870980 10871009 12 128 3.5 12.0 7.8 1.4 160 chr3R 10870849 intergenic Fdh -,Tsp86D + chr3R 10870929 3` UTR Fdh - chr3R 10871009 exon Fdh - chr3R_12_10870001 chr3R_10870001 RAL-371_125b 2024 chr3R 10935709 10935765 chr3R 10935841 10935892 10 129 1.0 3.0 2.0 3.3 183 chr3R 10935709 intergenic not near genes chr3R 10935800 intergenic not near genes chr3R 10935892 intergenic not near genes chr3R_10_10935001 chr3R_10935001 RAL-371_125b 2025 chr3R 10954369 10954422 chr3R 10954607 10954660 10 235 4.0 4.5 4.2 1.9 291 chr3R 10954369 intergenic not near genes chr3R 10954514 intergenic not near genes chr3R 10954660 intergenic not near genes chr3R_10_10950001 chr3R_10950001 RAL-371_125b 2026 chr3R 10957860 10957882 chr3R 10963275 10963314 Rt1c 4 5419 2.5 1.5 2.0 1.3 5454 chr3R 10957860 intergenic not near genes chr3R 10960587 intergenic not near genes chr3R 10963314 intergenic not near genes chr3R_4_10960001 chr3R_10960001 RAL-371_125b 2027 chr3R 11085416 11085491 chr3R 11085543 11085618 9 127 1.5 2.5 2.0 3.0 202 chr3R 11085416 3` UTR CR44940 - chr3R 11085517 intergenic CR44940 - chr3R 11085618 intergenic CR44940 - chr3R_9_11085001 chr3R_11085001 RAL-371_125b 2028 chr3R 11130763 11130820 chr3R 11130985 11131042 15 221 3.0 5.5 4.2 2.9 279 chr3R 11130763 intergenic not near genes chr3R 11130902 intergenic not near genes chr3R 11131042 intergenic not near genes chr3R_15_11130001 chr3R_11130001 RAL-371_125b 2029 chr3R 11144146 11144189 chr3R 11144574 11144612 9 427 6.0 4.0 5.0 1.5 466 chr3R 11144146 intergenic CheA86a - chr3R 11144379 3` UTR CheA86a - chr3R 11144612 exon CheA86a - chr3R_9_11140001 chr3R_11140001 RAL-371_125b 2030 chr3R 11174561 11174614 chr3R 11175325 11175371 5 763 21.0 20.5 20.8 0.2 810 chr3R 11174561 exon Ugt86Dj - chr3R 11174966 intron Ugt86Dj - chr3R 11175371 exon Ugt86Dj - chr3R_5_11170001 chr3R_11170001 RAL-371_125b 2031 chr3R 11247205 11247226 chr3R 11247336 11247357 INE-1 4 131 4.0 3.0 3.5 0.9 152 chr3R 11247205 intergenic CG5214 +,CR43283 - chr3R 11247281 intergenic CR43283 -,CG5214 + chr3R 11247357 intergenic CR43283 -,CG5214 + chr3R_4_11245001 chr3R_11245001 RAL-371_125b 2032 chr3R 11265896 11265915 chr3R 11266020 11266049 5 131 5.5 7.5 6.5 0.7 153 chr3R 11265896 intergenic not near genes chr3R 11265972 intergenic not near genes chr3R 11266049 intergenic not near genes chr3R_5_11265001 chr3R_11265001 RAL-371_125b 2033 chr3R 11342509 11342571 chr3R 11342635 11342697 14 126 0.5 2.0 1.2 6.4 188 chr3R 11342509 intron pros + chr3R 11342603 intron pros + chr3R 11342697 intron pros + chr3R_14_11340001 chr3R_11340001 RAL-371_125b 2034 chr3R 11549772 11549801 chr3R 11549900 11549929 4 126 7.0 3.0 5.0 0.7 157 chr3R 11549772 intergenic not near genes chr3R 11549850 intergenic not near genes chr3R 11549929 intergenic not near genes chr3R_4_11545001 chr3R_11545001 RAL-371_125b 2035 chr3R 11694692 11694738 chr3R 11694835 11694881 9 143 2.0 3.5 2.8 2.4 189 chr3R 11694692 intergenic Fer3 - chr3R 11694786 intergenic Fer3 - chr3R 11694881 intergenic not near genes chr3R_9_11690001 chr3R_11690001 RAL-371_125b 2036 chr3R 11738337 11738372 chr3R 11742040 11742121 10 3717 29.0 25.0 27.0 0.4 3784 chr3R 11738337 exon Blm - chr3R 11740229 exon Blm - chr3R 11742121 5` UTR CG14722 + chr3R_10_11740001 chr3R_11740001 RAL-371_125b 2037 chr3R 11841035 11841045 chr3R 11846275 11846286 BS 5 5241 13.0 8.5 10.8 0.4 5251 chr3R 11841035 intron CG6959 - chr3R 11843660 intron CG6959 - chr3R 11846286 intron CG6959 - chr3R_5_11840001 chr3R_11840001 RAL-371_125b 2038 chr3R 11841046 11841082 chr3R 11846267 11846323 BS 9 5235 9.5 8.5 9.0 0.9 5277 chr3R 11841046 intron CG6959 - chr3R 11843684 intron CG6959 - chr3R 11846323 intron CG6959 - chr3R_9_11840001 chr3R_11840001 RAL-371_125b 2039 chr3R 11914341 11914383 chr3R 11914476 11914518 8 135 4.0 3.5 3.8 1.7 177 chr3R 11914341 intron Cad87A - chr3R 11914430 intron Cad87A - chr3R 11914518 intron Cad87A - chr3R_8_11910001 chr3R_11910001 RAL-371_125b 2040 chr3R 11919261 11919328 chr3R 11919399 11919465 12 133 2.5 4.5 3.5 2.7 204 chr3R 11919261 intron Cad87A - chr3R 11919363 intron Cad87A - chr3R 11919465 intron Cad87A - chr3R_12_11915001 chr3R_11915001 RAL-371_125b 2041 chr3R 11930190 11930259 chr3R 11930324 11930393 14 133 3.0 5.5 4.2 2.7 203 chr3R 11930190 intron Cad87A - chr3R 11930292 intron Cad87A - chr3R 11930393 intron Cad87A - chr3R_14_11930001 chr3R_11930001 RAL-371_125b 2042 chr3R 11943158 11943219 chr3R 11943560 11943621 12 398 2.0 1.5 1.8 4.3 463 chr3R 11943158 intron Cad87A - chr3R 11943390 intron Cad87A - chr3R 11943621 intron Cad87A - chr3R_12_11940001 chr3R_11940001 RAL-371_125b 2043 chr3R 11945346 11945405 chr3R 11945494 11945553 9 148 3.5 3.0 3.2 2.1 207 chr3R 11945346 intron Cad87A - chr3R 11945450 intron Cad87A - chr3R 11945553 intron Cad87A - chr3R_9_11945001 chr3R_11945001 RAL-371_125b 2044 chr3R 11957805 11957854 chr3R 11958138 11958177 S-element 8 331 4.5 0.0 2.2 2.5 372 chr3R 11957805 intergenic not near genes chr3R 11957991 intergenic not near genes chr3R 11958177 intergenic not near genes chr3R_8_11955001 chr3R_11955001 RAL-371_125b 2045 chr3R 12022842 12022908 chr3R 12025069 12025135 pogo 9 2225 6.5 5.0 5.8 1.3 2293 chr3R 12022842 intergenic not near genes chr3R 12023988 intergenic not near genes chr3R 12025135 intergenic not near genes chr3R_9_12020001 chr3R_12020001 RAL-371_125b 2046 chr3R 12111838 12111921 chr3R 12111973 12112032 6 129 0.5 3.0 1.8 2.1 194 chr3R 12111838 intergenic dpr17 + chr3R 12111935 intergenic not near genes chr3R 12112032 intergenic not near genes chr3R_6_12110001 chr3R_12110001 RAL-371_125b 2047 chr3R 12169190 12169220 chr3R 12169313 12169348 5 127 5.0 5.5 5.2 0.8 158 chr3R 12169190 intergenic not near genes chr3R 12169269 intergenic not near genes chr3R 12169348 intergenic not near genes chr3R_5_12165001 chr3R_12165001 RAL-371_125b 2048 chr3R 12175218 12175261 chr3R 12175349 12175380 5 129 4.0 5.0 4.5 0.9 162 chr3R 12175218 intergenic not near genes chr3R 12175299 intergenic not near genes chr3R 12175380 intergenic not near genes chr3R_5_12175001 chr3R_12175001 RAL-371_125b 2049 chr3R 12183130 12183190 chr3R 12183266 12183326 8 136 3.0 1.5 2.2 2.5 196 chr3R 12183130 intergenic not near genes chr3R 12183228 intergenic not near genes chr3R 12183326 intergenic not near genes chr3R_8_12180001 chr3R_12180001 RAL-371_125b 2050 chr3R 12267811 12267861 chr3R 12267941 12267991 11 130 3.5 4.0 3.8 2.3 180 chr3R 12267811 intron svp + chr3R 12267901 intron svp + chr3R 12267991 intron svp + chr3R_11_12265001 chr3R_12265001 RAL-371_125b 2051 chr3R 12297607 12297641 chr3R 12297734 12297756 5 121 6.5 8.0 7.2 0.6 149 chr3R 12297607 intron svp + chr3R 12297682 intron svp + chr3R 12297756 intron svp + chr3R_5_12295001 chr3R_12295001 RAL-371_125b 2052 chr3R 12321936 12321998 chr3R 12322056 12322128 9 129 4.0 3.5 3.8 1.9 192 chr3R 12321936 intergenic not near genes chr3R 12322032 intergenic not near genes chr3R 12322128 intergenic not near genes chr3R_9_12320001 chr3R_12320001 RAL-371_125b 2053 chr3R 12350401 12350467 chr3R 12350532 12350598 11 128 2.0 1.5 1.8 3.9 197 chr3R 12350401 exon CG10038 - chr3R 12350500 exon CG10038 - chr3R 12350598 5` UTR CG10038 - chr3R_11_12350001 chr3R_12350001 RAL-371_125b 2054 chr3R 12364716 12364784 chr3R 12364857 12364925 9 141 2.5 6.5 4.5 1.6 209 chr3R 12364716 intergenic Tim17a1 -,GstD10 - chr3R 12364820 3` UTR GstD10 - chr3R 12364925 exon GstD10 - chr3R_9_12360001 chr3R_12360001 RAL-371_125b 2055 chr3R 12541157 12541189 chr3R 12543323 12543323 7 2173 7.0 4.0 5.5 1.1 2166 chr3R 12541157 intron Octbeta3R - chr3R 12542240 intron Octbeta3R - chr3R 12543323 intron Octbeta3R - chr3R_7_12540001 chr3R_12540001 RAL-371_125b 2056 chr3R 12555430 12555461 chr3R 12555514 12555590 5 116 2.0 3.5 2.8 1.3 160 chr3R 12555430 intron Octbeta2R - chr3R 12555510 intron Octbeta2R - chr3R 12555590 intron Octbeta2R - chr3R_5_12555001 chr3R_12555001 RAL-371_125b 2057 chr3R 12598962 12599028 chr3R 12599152 12599218 13 183 1.5 3.5 2.5 3.7 256 chr3R 12598962 intergenic not near genes chr3R 12599090 intergenic not near genes chr3R 12599218 intergenic not near genes chr3R_13_12595001 chr3R_12595001 RAL-371_125b 2058 chr3R 12733436 12733498 chr3R 12733563 12733625 11 126 3.5 5.5 4.5 2.0 189 chr3R 12733436 intergenic not near genes chr3R 12733530 intergenic not near genes chr3R 12733625 intergenic not near genes chr3R_11_12730001 chr3R_12730001 RAL-371_125b 2059 chr3R 12733844 12733875 chr3R 12733937 12734005 6 121 2.0 2.0 2.0 2.0 161 chr3R 12733844 intergenic not near genes chr3R 12733924 intergenic not near genes chr3R 12734005 intergenic not near genes chr3R_6_12730001 chr3R_12730001 RAL-371_125b 2060 chr3R 12763060 12763152 chr3R 12763198 12763279 9 131 0.5 1.5 1.0 4.5 219 chr3R 12763060 intron beat-Vc - chr3R 12763170 intron beat-Vc - chr3R 12763279 intron beat-Vc - chr3R_9_12760001 chr3R_12760001 RAL-371_125b 2061 chr3R 12771371 12771415 chr3R 12771551 12771580 5 172 5.0 1.5 3.2 1.2 209 chr3R 12771371 intron beat-Vc - chr3R 12771476 intron beat-Vc - chr3R 12771580 intron beat-Vc - chr3R_5_12770001 chr3R_12770001 RAL-371_125b 2062 chr3R 12787893 12787941 chr3R 12788026 12788074 9 133 2.5 0.0 1.2 4.1 181 chr3R 12787893 intergenic not near genes chr3R 12787984 intergenic not near genes chr3R 12788074 intergenic not near genes chr3R_9_12785001 chr3R_12785001 RAL-371_125b 2063 chr3R 12805813 12805885 chr3R 12805949 12805975 14 133 3.0 7.0 5.0 2.3 162 chr3R 12805813 intergenic not near genes chr3R 12805894 intergenic not near genes chr3R 12805975 intergenic not near genes chr3R_14_12805001 chr3R_12805001 RAL-371_125b 2064 chr3R 12876911 12876973 chr3R 12877044 12877106 12 131 2.0 5.0 3.5 2.7 195 chr3R 12876911 intergenic not near genes chr3R 12877008 intergenic not near genes chr3R 12877106 intergenic not near genes chr3R_12_12875001 chr3R_12875001 RAL-371_125b 2065 chr3R 12894590 12894607 chr3R 12894753 12894770 4 163 0.0 3.5 1.8 1.4 180 chr3R 12894590 intergenic not near genes chr3R 12894680 intergenic not near genes chr3R 12894770 intergenic not near genes chr3R_4_12890001 chr3R_12890001 RAL-371_125b 2066 chr3R 12920122 12920183 chr3R 12925375 12925395 copia 6 5243 2.5 2.0 2.2 1.9 5273 chr3R 12920122 intron beat-Vb + chr3R 12922758 intron beat-Vb + chr3R 12925395 intron beat-Vb + chr3R_6_12920001 chr3R_12920001 RAL-371_125b 2067 chr3R 12972505 12972581 chr3R 12972694 12972770 14 189 3.0 1.5 2.2 4.4 265 chr3R 12972505 intron CG7381 - chr3R 12972638 intron CG7381 - chr3R 12972770 intron CG7381 - chr3R_14_12970001 chr3R_12970001 RAL-371_125b 2068 chr3R 13059916 13059963 chr3R 13060161 13060208 8 245 4.0 2.5 3.2 1.9 292 chr3R 13059916 intron sim + chr3R 13060062 intron sim + chr3R 13060208 intron sim + chr3R_8_13060001 chr3R_13060001 RAL-371_125b 2069 chr3R 13064739 13064777 chr3R 13064888 13064922 5 147 0.0 0.0 0.0 5.0 183 chr3R 13064739 intron sim + chr3R 13064830 intron sim + chr3R 13064922 intron sim + chr3R_5_13060001 chr3R_13060001 RAL-371_125b 2070 chr3R 13066969 13067003 chr3R 13067106 13067140 4 137 1.5 3.0 2.2 1.2 171 chr3R 13066969 intron sim + chr3R 13067054 intron sim + chr3R 13067140 intron sim + chr3R_4_13065001 chr3R_13065001 RAL-371_125b 2071 chr3R 13067797 13067869 chr3R 13067922 13067999 15 124 4.0 3.5 3.8 3.1 202 chr3R 13067797 intron sim + chr3R 13067898 intron sim + chr3R 13067999 intron sim + chr3R_15_13065001 chr3R_13065001 RAL-371_125b 2072 chr3R 13075315 13075349 chr3R 13075446 13075480 4 131 5.5 2.5 4.0 0.8 165 chr3R 13075315 intron sim + chr3R 13075398 intron sim + chr3R 13075480 intron sim + chr3R_4_13075001 chr3R_13075001 RAL-371_125b 2073 chr3R 13100899 13100951 chr3R 13101593 13101655 8 702 7.0 1.5 4.2 1.5 756 chr3R 13100899 intron timeout + chr3R 13101277 intron timeout + chr3R 13101655 intron timeout + chr3R_8_13100001 chr3R_13100001 RAL-371_125b 2074 chr3R 13135797 13135839 chr3R 13138012 13138054 pogo 5 2215 4.0 4.0 4.0 1.0 2257 chr3R 13135797 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136926 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138054 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_5_13135001 chr3R_13135001 RAL-371_125b 2075 chr3R 13138268 13138347 chr3R 13138413 13138485 15 132 3.5 2.5 3.0 3.8 217 chr3R 13138268 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138376 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138485 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_15_13135001 chr3R_13135001 RAL-371_125b 2076 chr3R 13142994 13143053 chr3R 13148615 13148679 mdg3 18 5619 4.5 3.0 3.8 3.8 5685 chr3R 13142994 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145836 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148679 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_18_13145001 chr3R_13145001 RAL-371_125b 2077 chr3R 13205373 13205432 chr3R 13205499 13205554 15 128 4.0 10.0 7.0 1.9 181 chr3R 13205373 intergenic not near genes chr3R 13205464 intergenic not near genes chr3R 13205554 intergenic not near genes chr3R_15_13205001 chr3R_13205001 RAL-371_125b 2078 chr3R 13274175 13274189 chr3R 13274304 13274318 5 129 3.5 5.0 4.2 1.0 143 chr3R 13274175 intergenic not near genes chr3R 13274246 intergenic not near genes chr3R 13274318 intergenic not near genes chr3R_5_13270001 chr3R_13270001 RAL-371_125b 2079 chr3R 13274190 13274240 chr3R 13274289 13274369 10 122 1.5 4.0 2.8 2.6 179 chr3R 13274190 intergenic not near genes chr3R 13274280 intergenic not near genes chr3R 13274369 intergenic not near genes chr3R_10_13270001 chr3R_13270001 RAL-371_125b 2080 chr3R 13276180 13276239 chr3R 13276562 13276627 14 386 1.5 2.0 1.8 5.0 447 chr3R 13276180 intergenic not near genes chr3R 13276404 intergenic not near genes chr3R 13276627 intergenic not near genes chr3R_14_13275001 chr3R_13275001 RAL-371_125b 2081 chr3R 13328455 13328480 chr3R 13328568 13328627 9 143 0.0 4.5 2.2 2.8 172 chr3R 13328455 intergenic not near genes chr3R 13328541 intergenic not near genes chr3R 13328627 intergenic PK2-R2 - chr3R_9_13325001 chr3R_13325001 RAL-371_125b 2082 chr3R 13378796 13378857 chr3R 13378937 13378998 6 140 1.0 3.5 2.2 1.9 202 chr3R 13378796 intron CG9813 - chr3R 13378897 intron CG9813 - chr3R 13378998 intron CG9813 - chr3R_6_13375001 chr3R_13375001 RAL-371_125b 2083 chr3R 13393969 13393998 chr3R 13394189 13394218 9 220 4.5 3.5 4.0 1.8 249 chr3R 13393969 intron CCHa2 - chr3R 13394094 intron CCHa2 - chr3R 13394218 intron CCHa2 - chr3R_9_13390001 chr3R_13390001 RAL-371_125b 2084 chr3R 13408405 13408464 chr3R 13408531 13408590 7 126 0.5 1.0 0.8 3.9 185 chr3R 13408405 intergenic not near genes chr3R 13408498 intergenic not near genes chr3R 13408590 intergenic not near genes chr3R_7_13405001 chr3R_13405001 RAL-371_125b 2085 chr3R 13470803 13470877 chr3R 13471182 13471256 6 379 2.0 0.5 1.2 2.7 453 chr3R 13470803 intergenic not near genes chr3R 13471030 intergenic not near genes chr3R 13471256 intergenic not near genes chr3R_6_13470001 chr3R_13470001 RAL-371_125b 2086 chr3R 13517213 13517259 chr3R 13520080 13520125 jockey 6 2867 1.0 1.5 1.2 2.7 2912 chr3R 13517213 intergenic not near genes chr3R 13518669 intergenic not near genes chr3R 13520125 intergenic not near genes chr3R_6_13515001 chr3R_13515001 RAL-371_125b 2087 chr3R 13580799 13580830 chr3R 13580932 13580957 8 132 7.0 5.0 6.0 1.1 158 chr3R 13580799 intergenic not near genes chr3R 13580878 intergenic not near genes chr3R 13580957 intergenic not near genes chr3R_8_13580001 chr3R_13580001 RAL-371_125b 2088 chr3R 13598038 13598318 chr3R 13598166 13598453 24 126 7.5 3.5 5.5 3.7 415 chr3R 13598038 intergenic not near genes chr3R 13598246 intergenic not near genes chr3R 13598453 intergenic not near genes chr3R_24_13595001 chr3R_13595001 RAL-371_125b 2089 chr3R 13598344 13598371 chr3R 13598462 13598490 7 127 1.0 3.0 2.0 2.3 146 chr3R 13598344 intergenic not near genes chr3R 13598417 intergenic not near genes chr3R 13598490 intergenic not near genes chr3R_7_13595001 chr3R_13595001 RAL-371_125b 2090 chr3R 13603014 13603069 chr3R 13603155 13603210 10 141 5.0 3.5 4.2 1.9 196 chr3R 13603014 intergenic not near genes chr3R 13603112 intergenic not near genes chr3R 13603210 intergenic not near genes chr3R_10_13600001 chr3R_13600001 RAL-371_125b 2091 chr3R 13648453 13648517 chr3R 13648649 13648713 9 195 1.5 1.0 1.2 4.1 260 chr3R 13648453 intron rin + chr3R 13648583 intron rin + chr3R 13648713 intron rin + chr3R_9_13645001 chr3R_13645001 RAL-371_125b 2092 chr3R 13672896 13672969 chr3R 13673024 13673087 19 125 2.0 4.5 3.2 4.5 191 chr3R 13672896 intron Task6 - chr3R 13672992 intron Task6 - chr3R 13673087 intron Task6 - chr3R_19_13670001 chr3R_13670001 RAL-371_125b 2093 chr3R 13734638 13734671 chr3R 13734771 13734804 7 133 5.0 7.0 6.0 1.0 166 chr3R 13734638 intron CG34383 + chr3R 13734721 intron CG34383 + chr3R 13734804 intron CG34383 + chr3R_7_13730001 chr3R_13730001 RAL-371_125b 2094 chr3R 13863669 13863701 chr3R 13863807 13863839 4 138 5.5 5.0 5.2 0.6 170 chr3R 13863669 intergenic not near genes chr3R 13863754 intergenic not near genes chr3R 13863839 intergenic not near genes chr3R_4_13860001 chr3R_13860001 RAL-371_125b 2095 chr3R 13909888 13909895 chr3R 13910015 13910022 4 127 3.0 7.5 5.2 0.6 134 chr3R 13909888 intergenic not near genes chr3R 13909955 intergenic not near genes chr3R 13910022 intergenic not near genes chr3R_4_13905001 chr3R_13905001 RAL-371_125b 2096 chr3R 13948188 13948233 chr3R 13948316 13948361 5 128 2.5 2.5 2.5 1.4 173 chr3R 13948188 intergenic CG31517 + chr3R 13948274 intergenic CG31517 + chr3R 13948361 intergenic CG31517 + chr3R_5_13945001 chr3R_13945001 RAL-371_125b 2097 chr3R 13975331 13975392 chr3R 13975461 13975522 14 127 1.5 3.5 2.5 4.0 191 chr3R 13975331 intron rdx - chr3R 13975426 intron rdx - chr3R 13975522 intron rdx - chr3R_14_13975001 chr3R_13975001 RAL-371_125b 2098 chr3R 13994277 13994329 chr3R 13994558 13994627 9 300 2.0 0.0 1.0 4.5 350 chr3R 13994277 intron rdx - chr3R 13994452 intron rdx - chr3R 13994627 intron rdx - chr3R_9_13990001 chr3R_13990001 RAL-371_125b 2099 chr3R 14021602 14021676 chr3R 14023469 14023543 S-element 13 1867 4.0 6.0 5.0 2.2 1941 chr3R 14021602 intron rdx - chr3R 14022572 intron rdx - chr3R 14023543 intron rdx - chr3R_13_14020001 chr3R_14020001 RAL-371_125b 2100 chr3R 14029812 14029859 chr3R 14029950 14029997 13 138 3.5 4.0 3.8 2.7 185 chr3R 14029812 intron,exon rdx -,Cyp6d5 + chr3R 14029904 intron,intron rdx -,Cyp6d5 + chr3R 14029997 intron,intron rdx -,Cyp6d5 + chr3R_13_14025001 chr3R_14025001 RAL-371_125b 2101 chr3R 14037541 14037589 chr3R 14037667 14037719 8 126 2.5 7.5 5.0 1.3 178 chr3R 14037541 intergenic not near genes chr3R 14037630 intergenic not near genes chr3R 14037719 intergenic not near genes chr3R_8_14035001 chr3R_14035001 RAL-371_125b 2102 chr3R 14070087 14070143 chr3R 14070218 14070274 10 127 8.5 5.0 6.8 1.3 187 chr3R 14070087 intron foxo + chr3R 14070180 intron foxo + chr3R 14070274 intron foxo + chr3R_10_14070001 chr3R_14070001 RAL-371_125b 2103 chr3R 14083357 14083393 chr3R 14083508 14083544 7 150 5.0 0.0 2.5 2.0 187 chr3R 14083357 intron foxo + chr3R 14083450 intron foxo + chr3R 14083544 intron foxo + chr3R_7_14080001 chr3R_14080001 RAL-371_125b 2104 chr3R 14138995 14139025 chr3R 14139656 14139667 5 657 9.5 4.5 7.0 0.6 672 chr3R 14138995 intergenic not near genes chr3R 14139331 intergenic not near genes chr3R 14139667 intergenic not near genes chr3R_5_14135001 chr3R_14135001 RAL-371_125b 2105 chr3R 14180772 14180839 chr3R 14185587 14185654 F-element 4 4815 4.5 1.5 3.0 1.0 4882 chr3R 14180772 intron Dop1R1 - chr3R 14183213 intron Dop1R1 - chr3R 14185654 intron Dop1R1 - chr3R_4_14180001 chr3R_14180001 RAL-371_125b 2106 chr3R 14193823 14193834 chr3R 14193980 14193985 4 156 4.5 6.0 5.2 0.6 162 chr3R 14193823 intron Dop1R1 - chr3R 14193904 intron Dop1R1 - chr3R 14193985 intron Dop1R1 - chr3R_4_14190001 chr3R_14190001 RAL-371_125b 2107 chr3R 14194390 14194451 chr3R 14203589 14203650 roo 12 9199 4.0 3.5 3.8 2.5 9260 chr3R 14194390 intron Dop1R1 - chr3R 14199020 intron Dop1R1 - chr3R 14203650 intron Dop1R1 - chr3R_12_14195001 chr3R_14195001 RAL-371_125b 2108 chr3R 14212667 14212731 chr3R 14212801 14212808 15 128 3.5 4.0 3.8 3.1 141 chr3R 14212667 intron Dop1R1 - chr3R 14212738 intron Dop1R1 - chr3R 14212808 intron Dop1R1 - chr3R_15_14210001 chr3R_14210001 RAL-371_125b 2109 chr3R 14246354 14246418 chr3R 14247900 14247964 jockey 8 1533 3.0 2.5 2.8 2.1 1610 chr3R 14246354 intergenic not near genes chr3R 14247159 intergenic not near genes chr3R 14247964 intergenic not near genes chr3R_8_14245001 chr3R_14245001 RAL-371_125b 2110 chr3R 14248677 14248738 chr3R 14248805 14248866 13 128 3.0 3.5 3.2 3.1 189 chr3R 14248677 intergenic not near genes chr3R 14248772 intergenic not near genes chr3R 14248866 intergenic not near genes chr3R_13_14245001 chr3R_14245001 RAL-371_125b 2111 chr3R 14256731 14256761 chr3R 14256867 14256892 5 132 5.5 3.5 4.5 0.9 161 chr3R 14256731 intron,exon Aats-met -,CG43179 + chr3R 14256812 intron,3` UTR Aats-met -,CG43179 + chr3R 14256892 intron,3` UTR Aats-met -,CG43179 + chr3R_5_14255001 chr3R_14255001 RAL-371_125b 2112 chr3R 14313683 14313729 chr3R 14313819 14313865 8 136 0.0 4.5 2.2 2.5 182 chr3R 14313683 intron CG31321 + chr3R 14313774 intron CG31321 + chr3R 14313865 exon CG31321 + chr3R_8_14310001 chr3R_14310001 RAL-371_125b 2113 chr3R 14338914 14338935 chr3R 14339045 14339066 4 127 9.0 9.0 9.0 0.4 152 chr3R 14338914 intron NK7.1 - chr3R 14338990 intron NK7.1 - chr3R 14339066 intron NK7.1 - chr3R_4_14335001 chr3R_14335001 RAL-371_125b 2114 chr3R 14364025 14364085 chr3R 14364151 14364211 6 118 5.5 6.0 5.8 0.9 186 chr3R 14364025 intron NK7.1 - chr3R 14364118 intron NK7.1 - chr3R 14364211 intron NK7.1 - chr3R_6_14360001 chr3R_14360001 RAL-371_125b 2115 chr3R 14386165 14386196 chr3R 14386295 14386330 4 131 2.5 3.5 3.0 1.0 165 chr3R 14386165 intergenic not near genes chr3R 14386248 intergenic not near genes chr3R 14386330 intergenic not near genes chr3R_4_14385001 chr3R_14385001 RAL-371_125b 2116 chr3R 14391166 14391217 chr3R 14391335 14391386 8 165 3.5 2.0 2.8 2.1 220 chr3R 14391166 intergenic not near genes chr3R 14391276 intergenic cv-c - chr3R 14391386 intergenic cv-c - chr3R_8_14390001 chr3R_14390001 RAL-371_125b 2117 chr3R 14440687 14440734 chr3R 14440813 14440860 14 126 0.0 2.5 1.2 6.4 173 chr3R 14440687 intron cv-c - chr3R 14440774 intron cv-c - chr3R 14440860 intron cv-c - chr3R_14_14440001 chr3R_14440001 RAL-371_125b 2118 chr3R 14453274 14453343 chr3R 14453465 14453524 6 189 2.5 3.0 2.8 1.6 250 chr3R 14453274 intron cv-c - chr3R 14453399 intron cv-c - chr3R 14453524 intron cv-c - chr3R_6_14450001 chr3R_14450001 RAL-371_125b 2119 chr3R 14514439 14514500 chr3R 14514574 14514635 13 133 4.0 9.0 6.5 1.7 196 chr3R 14514439 3` UTR Pde6 - chr3R 14514537 3` UTR Pde6 - chr3R 14514635 3` UTR Pde6 - chr3R_13_14510001 chr3R_14510001 RAL-371_125b 2120 chr3R 14548539 14548580 chr3R 14548671 14548718 10 135 9.0 4.5 6.8 1.3 179 chr3R 14548539 intron Pde6 - chr3R 14548628 intron Pde6 - chr3R 14548718 intron Pde6 - chr3R_10_14545001 chr3R_14545001 RAL-371_125b 2121 chr3R 14608421 14608475 chr3R 14608563 14608617 9 142 3.0 2.5 2.8 2.4 196 chr3R 14608421 intergenic stumps + chr3R 14608519 intergenic stumps + chr3R 14608617 intergenic not near genes chr3R_9_14605001 chr3R_14605001 RAL-371_125b 2122 chr3R 14804735 14804787 chr3R 14804878 14804930 8 143 4.5 2.5 3.5 1.8 195 chr3R 14804735 3` UTR btsz - chr3R 14804832 3` UTR btsz - chr3R 14804930 3` UTR btsz - chr3R_8_14800001 chr3R_14800001 RAL-371_125b 2123 chr3R 14821580 14821630 chr3R 14821779 14821829 10 199 6.5 3.5 5.0 1.7 249 chr3R 14821580 intron btsz - chr3R 14821704 intron btsz - chr3R 14821829 intron btsz - chr3R_10_14820001 chr3R_14820001 RAL-371_125b 2124 chr3R 14944857 14944895 chr3R 14944988 14945026 5 130 4.5 4.0 4.2 1.0 169 chr3R 14944857 intergenic not near genes chr3R 14944942 intergenic not near genes chr3R 14945026 intergenic not near genes chr3R_5_14940001 chr3R_14940001 RAL-371_125b 2125 chr3R 14964598 14964649 chr3R 14964925 14964976 8 327 3.5 2.0 2.8 2.1 378 chr3R 14964598 intergenic not near genes chr3R 14964787 intergenic not near genes chr3R 14964976 intergenic not near genes chr3R_8_14960001 chr3R_14960001 RAL-371_125b 2126 chr3R 15026303 15026328 chr3R 15026439 15026464 5 136 4.0 7.5 5.8 0.7 161 chr3R 15026303 intergenic not near genes chr3R 15026384 intergenic not near genes chr3R 15026464 intergenic not near genes chr3R_5_15025001 chr3R_15025001 RAL-371_125b 2127 chr3R 15026331 15026341 chr3R 15026436 15026477 6 131 3.0 7.0 5.0 1.0 146 chr3R 15026331 intergenic not near genes chr3R 15026404 intergenic not near genes chr3R 15026477 intergenic not near genes chr3R_6_15025001 chr3R_15025001 RAL-371_125b 2128 chr3R 15036231 15036300 chr3R 15036441 15036476 16 207 5.0 3.0 4.0 3.2 245 chr3R 15036231 intergenic not near genes chr3R 15036354 intergenic not near genes chr3R 15036476 intergenic not near genes chr3R_16_15035001 chr3R_15035001 RAL-371_125b 2129 chr3R 15041350 15041414 chr3R 15045184 15045248 Doc 4 3834 0.0 1.0 0.5 2.7 3898 chr3R 15041350 intergenic not near genes chr3R 15043299 intergenic not near genes chr3R 15045248 intergenic not near genes chr3R_4_15040001 chr3R_15040001 RAL-371_125b 2130 chr3R 15061005 15061033 chr3R 15061136 15061164 7 131 5.0 4.5 4.8 1.2 159 chr3R 15061005 intron dpr9 - chr3R 15061084 intron dpr9 - chr3R 15061164 intron dpr9 - chr3R_7_15060001 chr3R_15060001 RAL-371_125b 2131 chr3R 15076626 15076685 chr3R 15076745 15076802 8 116 3.0 1.5 2.2 2.5 176 chr3R 15076626 intron dpr9 - chr3R 15076714 intron dpr9 - chr3R 15076802 intron dpr9 - chr3R_8_15075001 chr3R_15075001 RAL-371_125b 2132 chr3R 15079768 15079832 chr3R 15080059 15080123 pogo 14 289 4.5 3.0 3.8 2.9 355 chr3R 15079768 3` UTR CG6966 - chr3R 15079946 3` UTR CG6966 - chr3R 15080123 3` UTR CG6966 - chr3R_14_15075001 chr3R_15075001 RAL-371_125b 2133 chr3R 15087395 15087432 chr3R 15087501 15087558 5 112 3.5 3.0 3.2 1.2 163 chr3R 15087395 intron CG6966 - chr3R 15087476 intron CG6966 - chr3R 15087558 intron CG6966 - chr3R_5_15085001 chr3R_15085001 RAL-371_125b 2134 chr3R 15088045 15088105 chr3R 15088193 15088252 5 139 4.0 2.0 3.0 1.2 207 chr3R 15088045 intron CG6966 - chr3R 15088148 intron CG6966 - chr3R 15088252 intron CG6966 - chr3R_5_15085001 chr3R_15085001 RAL-371_125b 2135 chr3R 15102472 15102528 chr3R 15109780 15109832 412 9 7308 1.5 7.0 4.2 1.7 7360 chr3R 15102472 intron CG42788 - chr3R 15106152 intron CG42788 - chr3R 15109832 intron CG42788 - chr3R_9_15105001 chr3R_15105001 RAL-371_125b 2136 chr3R 15114866 15114897 chr3R 15114992 15115023 9 126 11.5 2.0 6.8 1.2 157 chr3R 15114866 intron CG42788 - chr3R 15114944 intron CG42788 - chr3R 15115023 intron CG42788 - chr3R_9_15110001 chr3R_15110001 RAL-371_125b 2137 chr3R 15123604 15123650 chr3R 15123825 15123871 10 212 6.5 0.5 3.5 2.2 267 chr3R 15123604 intron CG42788 - chr3R 15123738 intron CG42788 - chr3R 15123871 intron CG42788 - chr3R_10_15120001 chr3R_15120001 RAL-371_125b 2138 chr3R 15127736 15127795 chr3R 15127866 15127902 10 126 2.5 2.0 2.2 3.1 166 chr3R 15127736 intron CG42788 - chr3R 15127819 intron CG42788 - chr3R 15127902 intron CG42788 - chr3R_10_15125001 chr3R_15125001 RAL-371_125b 2139 chr3R 15132028 15132062 chr3R 15135138 15135172 Juan 18 3109 11.5 12.5 12.0 1.4 3144 chr3R 15132028 intergenic CG42788 - chr3R 15133600 intergenic not near genes chr3R 15135172 3` UTR CG6912 - chr3R_18_15130001 chr3R_15130001 RAL-371_125b 2140 chr3R 15143878 15143944 chr3R 15144111 15144177 7 233 2.0 2.0 2.0 2.3 299 chr3R 15143878 intron GlyS - chr3R 15144028 intron GlyS - chr3R 15144177 intron GlyS - chr3R_7_15140001 chr3R_15140001 RAL-371_125b 2141 chr3R 15162501 15162553 chr3R 15167319 15167371 F-element 8 4818 2.5 2.5 2.5 2.3 4870 chr3R 15162501 intron Gyc88E + chr3R 15164936 intron Gyc88E + chr3R 15167371 intron Gyc88E + chr3R_8_15160001 chr3R_15160001 RAL-371_125b 2142 chr3R 15265381 15265420 chr3R 15265516 15265545 6 133 1.5 2.0 1.8 2.1 164 chr3R 15265381 intergenic Set +,Oscp + chr3R 15265463 intergenic Oscp +,Set + chr3R 15265545 intergenic Oscp +,Set + chr3R_6_15265001 chr3R_15265001 RAL-371_125b 2143 chr3R 15406102 15406169 chr3R 15406233 15406300 6 131 2.5 5.5 4.0 1.2 198 chr3R 15406102 intron CG6125 - chr3R 15406201 intron CG6125 - chr3R 15406300 intron CG6125 - chr3R_6_15405001 chr3R_15405001 RAL-371_125b 2144 chr3R 15493284 15493354 chr3R 15493521 15493591 8 237 17.5 18.0 17.8 0.4 307 chr3R 15493284 3` UTR CG5205 + chr3R 15493438 intergenic CG5205 + chr3R 15493591 intergenic CG5205 + chr3R_8_15490001 chr3R_15490001 RAL-371_125b 2145 chr3R 15517563 15517626 chr3R 15517688 15517759 9 121 4.0 2.0 3.0 2.2 196 chr3R 15517563 intergenic not near genes chr3R 15517661 intergenic not near genes chr3R 15517759 intergenic not near genes chr3R_9_15515001 chr3R_15515001 RAL-371_125b 2146 chr3R 15601126 15601189 chr3R 15608698 15608761 412 13 7570 6.0 6.0 6.0 1.9 7635 chr3R 15601126 intergenic not near genes chr3R 15604944 intergenic not near genes chr3R 15608761 intergenic not near genes chr3R_13_15600001 chr3R_15600001 RAL-371_125b 2147 chr3R 15618704 15618751 chr3R 15626228 15626263 blood 9 7522 2.0 5.0 3.5 2.0 7559 chr3R 15618704 intergenic not near genes chr3R 15622484 intergenic not near genes chr3R 15626263 intergenic not near genes chr3R_9_15620001 chr3R_15620001 RAL-371_125b 2148 chr3R 15632445 15632469 chr3R 15632569 15632601 6 130 3.5 2.5 3.0 1.5 156 chr3R 15632445 intergenic not near genes chr3R 15632523 intergenic not near genes chr3R 15632601 intergenic not near genes chr3R_6_15630001 chr3R_15630001 RAL-371_125b 2149 chr3R 15646766 15646795 chr3R 15646886 15646928 13 131 5.0 5.5 5.2 2.1 162 chr3R 15646766 intergenic not near genes chr3R 15646847 intergenic not near genes chr3R 15646928 intergenic not near genes chr3R_13_15645001 chr3R_15645001 RAL-371_125b 2150 chr3R 15765414 15765472 chr3R 15765578 15765631 13 161 4.0 4.0 4.0 2.6 217 chr3R 15765414 intergenic not near genes chr3R 15765522 intergenic not near genes chr3R 15765631 intergenic not near genes chr3R_13_15765001 chr3R_15765001 RAL-371_125b 2151 chr3R 15844058 15844115 chr3R 15844206 15844263 8 148 5.5 0.5 3.0 2.0 205 chr3R 15844058 exon spn-E + chr3R 15844160 3` UTR spn-E + chr3R 15844263 3` UTR spn-E + chr3R_8_15840001 chr3R_15840001 RAL-371_125b 2152 chr3R 15892609 15892644 chr3R 15892740 15892775 7 131 6.0 6.0 6.0 1.0 166 chr3R 15892609 intron CG14877 - chr3R 15892692 intron CG14877 - chr3R 15892775 intron CG14877 - chr3R_7_15890001 chr3R_15890001 RAL-371_125b 2153 chr3R 15894088 15894144 chr3R 15894195 15894257 7 122 2.5 2.5 2.5 2.0 169 chr3R 15894088 intron CG14877 - chr3R 15894172 intron CG14877 - chr3R 15894257 intron CG14877 - chr3R_7_15890001 chr3R_15890001 RAL-371_125b 2154 chr3R 15924165 15924211 chr3R 15924302 15924350 8 138 5.0 3.0 4.0 1.6 185 chr3R 15924165 intron CG4221 + chr3R 15924258 intron CG4221 + chr3R 15924350 intron CG4221 + chr3R_8_15920001 chr3R_15920001 RAL-371_125b 2155 chr3R 15937401 15937447 chr3R 15937515 15937563 9 129 4.5 5.5 5.0 1.5 162 chr3R 15937401 intron Sap47 + chr3R 15937482 intron Sap47 + chr3R 15937563 intron Sap47 + chr3R_9_15935001 chr3R_15935001 RAL-371_125b 2156 chr3R 15959084 15959107 chr3R 15959212 15959235 8 128 11.5 6.5 9.0 0.8 151 chr3R 15959084 intron Sap47 + chr3R 15959160 intron Sap47 + chr3R 15959235 intron Sap47 + chr3R_8_15955001 chr3R_15955001 RAL-371_125b 2157 chr3R 16003597 16003663 chr3R 16003744 16003810 9 147 0.5 1.5 1.0 4.5 213 chr3R 16003597 3` UTR srp + chr3R 16003704 3` UTR srp + chr3R 16003810 3` UTR srp + chr3R_9_16000001 chr3R_16000001 RAL-371_125b 2158 chr3R 16246474 16246553 chr3R 16246600 16246679 6 126 2.5 5.0 3.8 1.2 205 chr3R 16246474 intron tara + chr3R 16246576 intron tara + chr3R 16246679 intron tara + chr3R_6_16245001 chr3R_16245001 RAL-371_125b 2159 chr3R 16374253 16374330 chr3R 16374420 16374445 8 160 4.0 5.0 4.5 1.5 192 chr3R 16374253 intergenic ss - chr3R 16374349 intergenic ss - chr3R 16374445 3` UTR ss - chr3R_8_16370001 chr3R_16370001 RAL-371_125b 2160 chr3R 16471196 16471232 chr3R 16471344 16471379 7 148 6.5 4.5 5.5 1.1 183 chr3R 16471196 exon CSN5 + chr3R 16471288 3` UTR CSN5 + chr3R 16471379 3` UTR CSN5 + chr3R_7_16470001 chr3R_16470001 RAL-371_125b 2161 chr3R 16519889 16519923 chr3R 16520032 16520066 10 141 9.5 2.0 5.8 1.5 177 chr3R 16519889 intron CG42342 + chr3R 16519978 intron CG42342 + chr3R 16520066 intron CG42342 + chr3R_10_16515001 chr3R_16515001 RAL-371_125b 2162 chr3R 16521159 16521229 chr3R 16521293 16521364 13 135 3.0 5.0 4.0 2.6 205 chr3R 16521159 intron CG42342 + chr3R 16521262 intron CG42342 + chr3R 16521364 intron CG42342 + chr3R_13_16520001 chr3R_16520001 RAL-371_125b 2163 chr3R 16582867 16582912 chr3R 16582996 16583041 9 124 4.5 6.0 5.2 1.5 174 chr3R 16582867 intron Scp2 - chr3R 16582954 intron Scp2 - chr3R 16583041 intron Scp2 - chr3R_9_16580001 chr3R_16580001 RAL-371_125b 2164 chr3R 16582916 16582918 chr3R 16582988 16583018 4 107 3.5 5.0 4.2 0.8 102 chr3R 16582916 intron Scp2 - chr3R 16582967 intron Scp2 - chr3R 16583018 intron Scp2 - chr3R_4_16580001 chr3R_16580001 RAL-371_125b 2165 chr3R 16621082 16621153 chr3R 16621221 16621281 10 130 4.5 5.0 4.8 1.7 199 chr3R 16621082 exon CG14893 + chr3R 16621182 exon CG14893 + chr3R 16621281 exon CG14893 + chr3R_10_16620001 chr3R_16620001 RAL-371_125b 2166 chr3R 16638269 16638339 chr3R 16638490 16638551 18 219 4.5 7.0 5.8 2.6 282 chr3R 16638269 intron Fas1 + chr3R 16638410 intron Fas1 + chr3R 16638551 intron Fas1 + chr3R_18_16635001 chr3R_16635001 RAL-371_125b 2167 chr3R 16671194 16671257 chr3R 16671322 16671386 7 129 3.5 2.5 3.0 1.8 192 chr3R 16671194 intron Ubx - chr3R 16671290 intron Ubx - chr3R 16671386 intron Ubx - chr3R_7_16670001 chr3R_16670001 RAL-371_125b 2168 chr3R 16725737 16725805 chr3R 16725868 16725930 10 130 3.5 2.5 3.0 2.5 193 chr3R 16725737 intron Ubx - chr3R 16725834 intron Ubx - chr3R 16725930 intron Ubx - chr3R_10_16725001 chr3R_16725001 RAL-371_125b 2169 chr3R 16732113 16732155 chr3R 16732259 16732301 8 146 1.0 0.0 0.5 5.3 188 chr3R 16732113 intron Ubx - chr3R 16732207 intron Ubx - chr3R 16732301 intron Ubx - chr3R_8_16730001 chr3R_16730001 RAL-371_125b 2170 chr3R 16752967 16753012 chr3R 16753130 16753175 5 163 2.5 3.5 3.0 1.2 208 chr3R 16752967 intron bxd - chr3R 16753071 intron bxd - chr3R 16753175 intron bxd - chr3R_5_16750001 chr3R_16750001 RAL-371_125b 2171 chr3R 16756278 16756306 chr3R 16762519 16762531 diver 7 6239 5.5 2.0 3.8 1.5 6253 chr3R 16756278 intron bxd - chr3R 16759404 intron bxd - chr3R 16762531 intron bxd - chr3R_7_16755001 chr3R_16755001 RAL-371_125b 2172 chr3R 16771588 16771623 chr3R 16771698 16771747 7 123 5.0 2.5 3.8 1.5 159 chr3R 16771588 intron bxd - chr3R 16771668 intron bxd - chr3R 16771747 intron bxd - chr3R_7_16770001 chr3R_16770001 RAL-371_125b 2173 chr3R 16836914 16836968 chr3R 16837293 16837347 7 378 5.5 3.5 4.5 1.3 433 chr3R 16836914 intron iab-8 - chr3R 16837130 intron iab-8 - chr3R 16837347 intron iab-8 - chr3R_7_16835001 chr3R_16835001 RAL-371_125b 2174 chr3R 16860294 16860366 chr3R 16860411 16860444 9 121 3.5 1.5 2.5 2.6 150 chr3R 16860294 intron iab-8 - chr3R 16860369 intron iab-8 - chr3R 16860444 intron iab-8 - chr3R_9_16860001 chr3R_16860001 RAL-371_125b 2175 chr3R 16921799 16921854 chr3R 16921933 16921988 10 132 4.5 2.5 3.5 2.2 189 chr3R 16921799 intron iab-8 - chr3R 16921894 intron iab-8 - chr3R 16921988 intron iab-8 - chr3R_10_16920001 chr3R_16920001 RAL-371_125b 2176 chr3R 17003648 17003707 chr3R 17003936 17003995 11 285 2.0 2.0 2.0 3.7 347 chr3R 17003648 intron Irc + chr3R 17003822 intron Irc + chr3R 17003995 intron Irc + chr3R_11_17000001 chr3R_17000001 RAL-371_125b 2177 chr3R 17023957 17023975 chr3R 17024160 17024178 6 202 4.5 0.0 2.2 1.9 221 chr3R 17023957 intron Pxd + chr3R 17024068 intron Pxd + chr3R 17024178 intron Pxd + chr3R_6_17020001 chr3R_17020001 RAL-371_125b 2178 chr3R 17101096 17101110 chr3R 17101226 17101240 5 130 4.5 0.0 2.2 1.6 144 chr3R 17101096 intron cher - chr3R 17101168 intron cher - chr3R 17101240 intron cher - chr3R_5_17100001 chr3R_17100001 RAL-371_125b 2179 chr3R 17194375 17194431 chr3R 17194504 17194560 11 128 5.0 4.5 4.8 1.9 185 chr3R 17194375 intron Mur89F - chr3R 17194468 intron Mur89F - chr3R 17194560 intron Mur89F - chr3R_11_17190001 chr3R_17190001 RAL-371_125b 2180 chr3R 17208816 17208821 chr3R 17208942 17208947 4 126 7.0 0.5 3.8 0.8 131 chr3R 17208816 intergenic not near genes chr3R 17208882 intergenic not near genes chr3R 17208947 intergenic not near genes chr3R_4_17205001 chr3R_17205001 RAL-371_125b 2181 chr3R 17213413 17213455 chr3R 17213970 17214007 6 556 6.0 2.5 4.2 1.2 594 chr3R 17213413 intergenic not near genes chr3R 17213710 intergenic not near genes chr3R 17214007 intergenic not near genes chr3R_6_17210001 chr3R_17210001 RAL-371_125b 2182 chr3R 17217442 17217509 chr3R 17217820 17217887 15 377 1.5 4.5 3.0 3.8 445 chr3R 17217442 exon CG31262 - chr3R 17217664 exon CG31262 - chr3R 17217887 exon CG31262 - chr3R_15_17215001 chr3R_17215001 RAL-371_125b 2183 chr3R 17245440 17245475 chr3R 17245622 17245643 6 180 4.0 1.5 2.8 1.6 203 chr3R 17245440 intron beat-IIb - chr3R 17245542 intron beat-IIb - chr3R 17245643 intron beat-IIb - chr3R_6_17245001 chr3R_17245001 RAL-371_125b 2184 chr3R 17346659 17346696 chr3R 17348272 17348309 F-element 11 1613 4.5 4.5 4.5 2.0 1650 chr3R 17346659 intron beat-IIa - chr3R 17347484 intron beat-IIa - chr3R 17348309 intron beat-IIa - chr3R_11_17345001 chr3R_17345001 RAL-371_125b 2185 chr3R 17354779 17354816 chr3R 17354961 17354998 4 181 5.0 1.0 3.0 1.0 219 chr3R 17354779 intron beat-IIa - chr3R 17354888 intron beat-IIa - chr3R 17354998 intron beat-IIa - chr3R_4_17350001 chr3R_17350001 RAL-371_125b 2186 chr3R 17426739 17426799 chr3R 17426868 17426928 11 127 2.0 3.0 2.5 3.1 189 chr3R 17426739 intron CG5873 + chr3R 17426834 intron CG5873 + chr3R 17426928 intron CG5873 + chr3R_11_17425001 chr3R_17425001 RAL-371_125b 2187 chr3R 17463107 17463177 chr3R 17463237 17463312 7 134 0.0 1.5 0.8 3.9 205 chr3R 17463107 intergenic not near genes chr3R 17463210 intergenic not near genes chr3R 17463312 intergenic not near genes chr3R_7_17460001 chr3R_17460001 RAL-371_125b 2188 chr3R 17465274 17465345 chr3R 17465408 17465479 12 134 2.0 2.5 2.2 3.8 205 chr3R 17465274 intergenic not near genes chr3R 17465376 intergenic not near genes chr3R 17465479 intergenic not near genes chr3R_12_17465001 chr3R_17465001 RAL-371_125b 2189 chr3R 17497921 17497983 chr3R 17498057 17498119 10 136 3.0 5.0 4.0 2.0 198 chr3R 17497921 intron Dscam3 - chr3R 17498020 intron Dscam3 - chr3R 17498119 intron Dscam3 - chr3R_10_17495001 chr3R_17495001 RAL-371_125b 2190 chr3R 17506347 17506388 chr3R 17506475 17506516 9 127 3.5 4.5 4.0 1.8 169 chr3R 17506347 intergenic not near genes chr3R 17506432 intergenic not near genes chr3R 17506516 intergenic not near genes chr3R_9_17505001 chr3R_17505001 RAL-371_125b 2191 chr3R 17509231 17509242 chr3R 17516806 17516833 412 4 7584 3.0 7.5 5.2 0.6 7602 chr3R 17509231 intergenic not near genes chr3R 17513032 intergenic not near genes chr3R 17516833 intergenic not near genes chr3R_4_17510001 chr3R_17510001 RAL-371_125b 2192 chr3R 17521518 17521578 chr3R 17521725 17521788 4 204 1.5 4.0 2.8 1.1 270 chr3R 17521518 intergenic not near genes chr3R 17521653 intergenic not near genes chr3R 17521788 intergenic not near genes chr3R_4_17520001 chr3R_17520001 RAL-371_125b 2193 chr3R 17522173 17522182 chr3R 17522316 17522320 4 142 11.5 0.5 6.0 0.6 147 chr3R 17522173 intergenic not near genes chr3R 17522246 intergenic not near genes chr3R 17522320 intergenic not near genes chr3R_4_17520001 chr3R_17520001 RAL-371_125b 2194 chr3R 17546044 17546110 chr3R 17546173 17546244 16 127 2.5 2.5 2.5 4.6 200 chr3R 17546044 exon Prx3 - chr3R 17546144 intron Prx3 - chr3R 17546244 exon Prx3 - chr3R_16_17545001 chr3R_17545001 RAL-371_125b 2195 chr3R 17591259 17591274 chr3R 17591731 17591760 F-element 5 476 5.5 6.5 6.0 0.7 501 chr3R 17591259 intergenic not near genes chr3R 17591510 intergenic not near genes chr3R 17591760 intergenic not near genes chr3R_5_17590001 chr3R_17590001 RAL-371_125b 2196 chr3R 17638267 17638338 chr3R 17638803 17638874 roo 4 536 1.0 2.5 1.8 1.4 607 chr3R 17638267 intron CG43175 + chr3R 17638570 intron CG43175 + chr3R 17638874 intron,intron CG43175 +,CR45222 + chr3R_4_17635001 chr3R_17635001 RAL-371_125b 2197 chr3R 17645664 17645683 chr3R 17645844 17645863 4 180 5.0 7.5 6.2 0.6 199 chr3R 17645664 intergenic CG43175 + chr3R 17645764 intergenic not near genes chr3R 17645863 intergenic not near genes chr3R_4_17645001 chr3R_17645001 RAL-371_125b 2198 chr3R 17655823 17655879 chr3R 17655951 17656015 9 135 4.0 2.5 3.2 2.1 192 chr3R 17655823 intron CG14322 + chr3R 17655919 intron CG14322 + chr3R 17656015 intron CG14322 + chr3R_9_17655001 chr3R_17655001 RAL-371_125b 2199 chr3R 17725042 17725081 chr3R 17725177 17725211 4 138 5.0 0.0 2.5 1.1 169 chr3R 17725042 5` UTR Atg8b - chr3R 17725126 intergenic Atg8b - chr3R 17725211 intergenic Atg8b - chr3R_4_17725001 chr3R_17725001 RAL-371_125b 2200 chr3R 17734078 17734130 chr3R 17734216 17734265 9 135 4.0 5.0 4.5 1.6 187 chr3R 17734078 exon CG14321 + chr3R 17734172 3` UTR CG14321 + chr3R 17734265 3` UTR CG14321 + chr3R_9_17730001 chr3R_17730001 RAL-371_125b 2201 chr3R 17749012 17749092 chr3R 17749144 17749214 5 125 1.0 1.5 1.2 2.3 202 chr3R 17749012 intergenic not near genes chr3R 17749113 intergenic not near genes chr3R 17749214 intergenic not near genes chr3R_5_17745001 chr3R_17745001 RAL-371_125b 2202 chr3R 17773343 17773392 chr3R 17773473 17773522 8 130 2.5 5.0 3.8 1.7 179 chr3R 17773343 exon CG43102 - chr3R 17773432 intron CG43102 - chr3R 17773522 exon CG43102 - chr3R_8_17770001 chr3R_17770001 RAL-371_125b 2203 chr3R 17823388 17823444 chr3R 17823551 17823607 11 161 3.0 5.0 4.0 2.2 219 chr3R 17823388 intron tinc + chr3R 17823498 intron tinc + chr3R 17823607 intron tinc + chr3R_11_17820001 chr3R_17820001 RAL-371_125b 2204 chr3R 17840402 17840418 chr3R 17840529 17840545 4 127 1.0 7.0 4.0 0.8 143 chr3R 17840402 intron tinc + chr3R 17840474 intron tinc + chr3R 17840545 intron tinc + chr3R_4_17840001 chr3R_17840001 RAL-371_125b 2205 chr3R 17898322 17898338 chr3R 17898454 17898470 5 132 9.5 6.0 7.8 0.6 148 chr3R 17898322 intron Rim - chr3R 17898396 intron Rim - chr3R 17898470 intron Rim - chr3R_5_17895001 chr3R_17895001 RAL-371_125b 2206 chr3R 17925816 17925844 chr3R 17927333 17927361 hobo 8 1516 5.0 4.0 4.5 1.5 1545 chr3R 17925816 intron cpo + chr3R 17926588 intron cpo + chr3R 17927361 intron cpo + chr3R_8_17925001 chr3R_17925001 RAL-371_125b 2207 chr3R 17976483 17976531 chr3R 17976610 17976658 10 125 3.0 3.5 3.2 2.4 175 chr3R 17976483 intron cpo + chr3R 17976570 intron cpo + chr3R 17976658 intron cpo + chr3R_10_17975001 chr3R_17975001 RAL-371_125b 2208 chr3R 18032741 18032796 chr3R 18040453 18040516 opus 8 7720 0.5 3.0 1.8 2.9 7775 chr3R 18032741 intergenic not near genes chr3R 18036628 intergenic not near genes chr3R 18040516 intergenic not near genes chr3R_8_18035001 chr3R_18035001 RAL-371_125b 2209 chr3R 18061404 18061442 chr3R 18061546 18061584 5 142 1.0 0.0 0.5 3.3 180 chr3R 18061404 intergenic not near genes chr3R 18061494 intergenic not near genes chr3R 18061584 intergenic not near genes chr3R_5_18060001 chr3R_18060001 RAL-371_125b 2210 chr3R 18061576 18061582 chr3R 18063200 18063206 F-element 4 1624 0.0 4.0 2.0 1.3 1630 chr3R 18061576 intergenic not near genes chr3R 18062391 intergenic not near genes chr3R 18063206 intergenic not near genes chr3R_4_18060001 chr3R_18060001 RAL-371_125b 2211 chr3R 18067932 18068016 chr3R 18068078 18068148 8 138 0.0 2.5 1.2 3.6 216 chr3R 18067932 intergenic not near genes chr3R 18068040 intergenic not near genes chr3R 18068148 intergenic not near genes chr3R_8_18065001 chr3R_18065001 RAL-371_125b 2212 chr3R 18117370 18117439 chr3R 18117496 18117565 5 126 2.0 1.0 1.5 2.0 195 chr3R 18117370 intron sr + chr3R 18117468 intron sr + chr3R 18117565 intron sr + chr3R_5_18115001 chr3R_18115001 RAL-371_125b 2213 chr3R 18119702 18119743 chr3R 18119829 18119870 5 124 2.0 3.0 2.5 1.4 168 chr3R 18119702 intron sr + chr3R 18119786 intron sr + chr3R 18119870 intron sr + chr3R_5_18115001 chr3R_18115001 RAL-371_125b 2214 chr3R 18135655 18135703 chr3R 18135790 18135835 12 134 9.0 2.5 5.8 1.8 180 chr3R 18135655 intergenic not near genes chr3R 18135745 intergenic not near genes chr3R 18135835 intergenic not near genes chr3R_12_18135001 chr3R_18135001 RAL-371_125b 2215 chr3R 18143445 18143513 chr3R 18143582 18143651 7 138 3.0 0.0 1.5 2.8 206 chr3R 18143445 intergenic not near genes chr3R 18143548 intergenic not near genes chr3R 18143651 intergenic not near genes chr3R_7_18140001 chr3R_18140001 RAL-371_125b 2216 chr3R 18174705 18174728 chr3R 18174805 18174871 4 113 0.5 2.5 1.5 1.6 166 chr3R 18174705 intron PP2A-B' + chr3R 18174788 intron PP2A-B' + chr3R 18174871 intron PP2A-B' + chr3R_4_18170001 chr3R_18170001 RAL-371_125b 2217 chr3R 18419470 18419516 chr3R 18419609 18419655 9 138 5.0 7.0 6.0 1.3 185 chr3R 18419470 intron fru - chr3R 18419562 intron fru - chr3R 18419655 intron fru - chr3R_9_18415001 chr3R_18415001 RAL-371_125b 2218 chr3R 18464271 18464336 chr3R 18464459 18464525 6 188 0.5 3.0 1.8 2.1 254 chr3R 18464271 intron fru - chr3R 18464398 intron fru - chr3R 18464525 intron fru - chr3R_6_18460001 chr3R_18460001 RAL-371_125b 2219 chr3R 18472241 18472290 chr3R 18472392 18472441 9 151 0.5 0.0 0.2 7.5 200 chr3R 18472241 intron fru - chr3R 18472341 intron fru - chr3R 18472441 intron fru - chr3R_9_18470001 chr3R_18470001 RAL-371_125b 2220 chr3R 18473248 18473253 chr3R 18473386 18473391 5 137 0.0 9.0 4.5 0.9 143 chr3R 18473248 intron fru - chr3R 18473320 intron fru - chr3R 18473391 intron fru - chr3R_5_18470001 chr3R_18470001 RAL-371_125b 2221 chr3R 18501554 18501617 chr3R 18501685 18501748 17 131 2.5 6.5 4.5 3.1 194 chr3R 18501554 intron fru - chr3R 18501651 intron fru - chr3R 18501748 intron fru - chr3R_17_18500001 chr3R_18500001 RAL-371_125b 2222 chr3R 18528324 18528382 chr3R 18528461 18528519 16 136 5.0 2.5 3.8 3.3 195 chr3R 18528324 intron fru - chr3R 18528422 intron fru - chr3R 18528519 intron fru - chr3R_16_18525001 chr3R_18525001 RAL-371_125b 2223 chr3R 18559396 18559512 chr3R 18559523 18559658 4 132 0.0 0.0 0.0 4.0 262 chr3R 18559396 intergenic CG7691 + chr3R 18559527 intergenic CG7691 + chr3R 18559658 intergenic CG7691 + chr3R_4_18555001 chr3R_18555001 RAL-371_125b 2224 chr3R 18562520 18562588 chr3R 18562689 18562758 6 167 1.5 1.5 1.5 2.4 238 chr3R 18562520 intergenic not near genes chr3R 18562639 intergenic not near genes chr3R 18562758 intergenic not near genes chr3R_6_18560001 chr3R_18560001 RAL-371_125b 2225 chr3R 18606468 18606515 chr3R 18610750 18610797 F-element 14 4282 6.0 2.5 4.2 2.7 4329 chr3R 18606468 intron,intron qin +,CG14304 - chr3R 18608632 intron,intron qin +,CG14304 - chr3R 18610797 intron,intron qin +,CG14304 - chr3R_14_18605001 chr3R_18605001 RAL-371_125b 2226 chr3R 18622750 18622785 chr3R 18622876 18622881 5 120 4.5 0.0 2.2 1.6 131 chr3R 18622750 intron qin + chr3R 18622816 intron qin + chr3R 18622881 intron qin + chr3R_5_18620001 chr3R_18620001 RAL-371_125b 2227 chr3R 18622789 18622813 chr3R 18622866 18622944 5 119 4.0 0.0 2.0 1.7 155 chr3R 18622789 intron qin + chr3R 18622866 intron qin + chr3R 18622944 intron qin + chr3R_5_18620001 chr3R_18620001 RAL-371_125b 2228 chr3R 18766736 18766802 chr3R 18766864 18766930 15 122 3.5 3.5 3.5 3.3 194 chr3R 18766736 intron CG7720 - chr3R 18766833 intron CG7720 - chr3R 18766930 intron CG7720 - chr3R_15_18765001 chr3R_18765001 RAL-371_125b 2229 chr3R 18781652 18781724 chr3R 18781778 18781839 18 123 1.0 2.5 1.8 6.4 187 chr3R 18781652 intron CG7720 - chr3R 18781746 intron CG7720 - chr3R 18781839 intron CG7720 - chr3R_18_18780001 chr3R_18780001 RAL-371_125b 2230 chr3R 18782713 18782757 chr3R 18782857 18782892 14 142 7.5 4.5 6.0 2.0 179 chr3R 18782713 intron CG7720 - chr3R 18782802 intron CG7720 - chr3R 18782892 intron CG7720 - chr3R_14_18780001 chr3R_18780001 RAL-371_125b 2231 chr3R 18785840 18785895 chr3R 18785967 18786022 5 123 3.0 0.5 1.8 1.8 182 chr3R 18785840 intron CG7720 - chr3R 18785931 intron CG7720 - chr3R 18786022 intron CG7720 - chr3R_5_18785001 chr3R_18785001 RAL-371_125b 2232 chr3R 18807279 18807312 chr3R 18807405 18807438 7 126 2.0 0.0 1.0 3.5 159 chr3R 18807279 exon CG18208 - chr3R 18807358 intron CG18208 - chr3R 18807438 intron CG18208 - chr3R_7_18805001 chr3R_18805001 RAL-371_125b 2233 chr3R 18812062 18812090 chr3R 18812190 18812217 8 128 2.5 8.5 5.5 1.2 155 chr3R 18812062 intron CG18208 - chr3R 18812140 intron CG18208 - chr3R 18812217 intron CG18208 - chr3R_8_18810001 chr3R_18810001 RAL-371_125b 2234 chr3R 18887554 18887597 chr3R 18887685 18887728 11 130 2.0 6.5 4.2 2.1 174 chr3R 18887554 intergenic not near genes chr3R 18887641 intergenic not near genes chr3R 18887728 intergenic not near genes chr3R_11_18885001 chr3R_18885001 RAL-371_125b 2235 chr3R 18992296 18992352 chr3R 18992427 18992487 6 134 0.0 1.5 0.8 3.3 191 chr3R 18992296 intron gukh + chr3R 18992392 intron gukh + chr3R 18992487 intron gukh + chr3R_6_18990001 chr3R_18990001 RAL-371_125b 2236 chr3R 19136408 19136472 chr3R 19139761 19139808 Bari1 13 3339 54.5 17.5 36.0 0.4 3400 chr3R 19136408 exon Cyp12a4 + chr3R 19138108 intergenic not near genes chr3R 19139808 3` UTR Ppcs - chr3R_13_19135001 chr3R_19135001 RAL-371_125b 2237 chr3R 19140228 19140244 chr3R 19140726 19140742 4 496 8.5 3.0 5.8 0.6 514 chr3R 19140228 3` UTR Ppcs - chr3R 19140485 3` UTR Ppcs - chr3R 19140742 3` UTR Ppcs - chr3R_4_19140001 chr3R_19140001 RAL-371_125b 2238 chr3R 19140276 19140290 chr3R 19140714 19140762 5 466 7.0 2.5 4.8 0.9 486 chr3R 19140276 3` UTR Ppcs - chr3R 19140519 3` UTR Ppcs - chr3R 19140762 3` UTR Ppcs - chr3R_5_19140001 chr3R_19140001 RAL-371_125b 2239 chr3R 19165876 19165892 chr3R 19166036 19166052 8 160 9.0 3.0 6.0 1.1 176 chr3R 19165876 intron sqz + chr3R 19165964 intron sqz + chr3R 19166052 intron sqz + chr3R_8_19165001 chr3R_19165001 RAL-371_125b 2240 chr3R 19165894 19165949 chr3R 19166034 19166054 11 151 4.0 3.0 3.5 2.4 160 chr3R 19165894 intron sqz + chr3R 19165974 intron sqz + chr3R 19166054 intron sqz + chr3R_11_19165001 chr3R_19165001 RAL-371_125b 2241 chr3R 19198288 19198359 chr3R 19198460 19198531 10 170 2.0 4.0 3.0 2.5 243 chr3R 19198288 intron CG31475 + chr3R 19198410 intron CG31475 + chr3R 19198531 intron CG31475 + chr3R_10_19195001 chr3R_19195001 RAL-371_125b 2242 chr3R 19276903 19276941 chr3R 19277033 19277071 4 130 2.0 2.0 2.0 1.3 168 chr3R 19276903 intergenic not near genes chr3R 19276987 intergenic not near genes chr3R 19277071 intergenic not near genes chr3R_4_19275001 chr3R_19275001 RAL-371_125b 2243 chr3R 19337156 19337202 chr3R 19337294 19337333 11 136 6.5 8.0 7.2 1.3 177 chr3R 19337156 intergenic not near genes chr3R 19337244 intergenic not near genes chr3R 19337333 intergenic not near genes chr3R_11_19335001 chr3R_19335001 RAL-371_125b 2244 chr3R 19340361 19340422 chr3R 19340488 19340549 14 127 1.5 1.5 1.5 5.6 188 chr3R 19340361 intergenic not near genes chr3R 19340455 intergenic not near genes chr3R 19340549 intergenic not near genes chr3R_14_19340001 chr3R_19340001 RAL-371_125b 2245 chr3R 19344625 19344693 chr3R 19344810 19344878 11 185 5.5 1.0 3.2 2.6 253 chr3R 19344625 intergenic not near genes chr3R 19344752 intergenic not near genes chr3R 19344878 intergenic not near genes chr3R_11_19340001 chr3R_19340001 RAL-371_125b 2246 chr3R 13179948 13180021 chr3R 19449668 19449741 14 6269721 16.5 0.0 8.2 1.5 6269793 chr3R 13179948 intergenic not near genes chr3R 16314844 exon Sulf1 - chr3R 19449741 intron CG31221 + chr3R_14_16310001 chr3R_16310001 RAL-371_125b 2247 chr3R 19505932 19505964 chr3R 19506061 19506113 6 146 5.0 8.5 6.8 0.8 181 chr3R 19505932 exon Dys + chr3R 19506022 intron Dys + chr3R 19506113 intron Dys + chr3R_6_19505001 chr3R_19505001 RAL-371_125b 2248 chr3R 19590597 19590643 chr3R 19590739 19590785 7 139 2.5 4.0 3.2 1.7 188 chr3R 19590597 exon Dys + chr3R 19590691 intron Dys + chr3R 19590785 exon Dys + chr3R_7_19590001 chr3R_19590001 RAL-371_125b 2249 chr3R 19602724 19602783 chr3R 19602852 19602911 9 127 3.5 2.5 3.0 2.2 187 chr3R 19602724 intergenic CG7333 + chr3R 19602818 intergenic CG7333 + chr3R 19602911 intergenic CG7333 +,CG7342 + chr3R_9_19600001 chr3R_19600001 RAL-371_125b 2250 chr3R 19673948 19674020 chr3R 19674369 19674433 6 419 1.5 3.0 2.2 1.9 485 chr3R 19673948 intron Naam + chr3R 19674190 intron Naam + chr3R 19674433 intron Naam + chr3R_6_19670001 chr3R_19670001 RAL-371_125b 2251 chr3R 19735665 19735676 chr3R 19735821 19735832 4 156 6.5 3.5 5.0 0.7 167 chr3R 19735665 intron GluClalpha + chr3R 19735748 intron GluClalpha + chr3R 19735832 intron GluClalpha + chr3R_4_19735001 chr3R_19735001 RAL-371_125b 2252 chr3R 19735679 19735740 chr3R 19735816 19735896 6 140 2.0 2.5 2.2 1.9 217 chr3R 19735679 intron GluClalpha + chr3R 19735788 intron GluClalpha + chr3R 19735896 intron GluClalpha + chr3R_6_19735001 chr3R_19735001 RAL-371_125b 2253 chr3R 19783162 19783205 chr3R 19783290 19783343 8 137 3.0 3.0 3.0 2.0 181 chr3R 19783162 intergenic CG11407 +,CG11453 + chr3R 19783252 intergenic CG11407 +,CG11453 + chr3R 19783343 intergenic CG11453 +,CG11407 + chr3R_8_19780001 chr3R_19780001 RAL-371_125b 2254 chr3R 19827480 19827551 chr3R 19827616 19827687 5 136 5.5 0.5 3.0 1.2 207 chr3R 19827480 intron bnl - chr3R 19827584 intron bnl - chr3R 19827687 exon bnl - chr3R_5_19825001 chr3R_19825001 RAL-371_125b 2255 chr3R 20041081 20041140 chr3R 20041229 20041269 12 150 1.5 4.0 2.8 3.2 188 chr3R 20041081 intron CG17193 - chr3R 20041175 intron CG17193 - chr3R 20041269 intron CG17193 - chr3R_12_20040001 chr3R_20040001 RAL-371_125b 2256 chr3R 20109498 20109554 chr3R 20114754 20114810 copia 7 5255 3.0 3.0 3.0 1.8 5312 chr3R 20109498 intergenic not near genes chr3R 20112154 intergenic not near genes chr3R 20114810 intergenic CG10887 + chr3R_7_20110001 chr3R_20110001 RAL-371_125b 2257 chr3R 20156654 20156709 chr3R 20165874 20165929 roo 7 9220 2.5 3.5 3.0 1.8 9275 chr3R 20156654 intergenic not near genes chr3R 20161292 intergenic not near genes chr3R 20165929 intergenic not near genes chr3R_7_20160001 chr3R_20160001 RAL-371_125b 2258 chr3R 20203925 20203940 chr3R 20204056 20204071 6 131 1.0 5.0 3.0 1.5 146 chr3R 20203925 intergenic not near genes chr3R 20203998 intergenic not near genes chr3R 20204071 intergenic not near genes chr3R_6_20200001 chr3R_20200001 RAL-371_125b 2259 chr3R 20205516 20205590 chr3R 20205688 20205762 11 172 2.5 3.5 3.0 2.8 246 chr3R 20205516 intron Nlg4 + chr3R 20205639 intron Nlg4 + chr3R 20205762 intron Nlg4 + chr3R_11_20205001 chr3R_20205001 RAL-371_125b 2260 chr3R 20220982 20221041 chr3R 20221514 20221573 4 532 1.0 3.0 2.0 1.3 591 chr3R 20220982 intron Nlg4 + chr3R 20221278 intron Nlg4 + chr3R 20221573 intron Nlg4 + chr3R_4_20220001 chr3R_20220001 RAL-371_125b 2261 chr3R 20231463 20231513 chr3R 20231607 20231642 6 132 17.0 8.5 12.8 0.4 179 chr3R 20231463 intron Nlg4 + chr3R 20231552 intron Nlg4 + chr3R 20231642 intron Nlg4 + chr3R_6_20230001 chr3R_20230001 RAL-371_125b 2262 chr3R 20245243 20245287 chr3R 20248905 20248948 F-element 4 3662 3.5 0.0 1.8 1.4 3705 chr3R 20245243 3` UTR Nlg4 + chr3R 20247096 intergenic not near genes chr3R 20248948 intergenic not near genes chr3R_4_20245001 chr3R_20245001 RAL-371_125b 2263 chr3R 20252181 20252247 chr3R 20252309 20252375 9 128 1.0 3.0 2.0 3.0 194 chr3R 20252181 intergenic not near genes chr3R 20252278 intergenic cic + chr3R 20252375 intergenic cic + chr3R_9_20250001 chr3R_20250001 RAL-371_125b 2264 chr3R 20266486 20266536 chr3R 20273007 20273057 Burdock 8 6521 1.5 5.5 3.5 1.8 6571 chr3R 20266486 intron cic + chr3R 20269772 intron cic + chr3R 20273057 intron cic + chr3R_8_20265001 chr3R_20265001 RAL-371_125b 2265 chr3R 20282226 20282297 chr3R 20282352 20282423 13 125 0.0 2.5 1.2 5.9 197 chr3R 20282226 intron cic + chr3R 20282324 intron cic + chr3R 20282423 intron cic + chr3R_13_20280001 chr3R_20280001 RAL-371_125b 2266 chr3R 20330964 20331014 chr3R 20331500 20331550 roo 8 536 4.5 3.5 4.0 1.6 586 chr3R 20330964 intergenic Sirt2 + chr3R 20331257 intergenic Sirt2 + chr3R 20331550 intergenic not near genes chr3R_8_20330001 chr3R_20330001 RAL-371_125b 2267 chr3R 20362448 20362525 chr3R 20362577 20362654 12 129 4.5 0.5 2.5 3.4 206 chr3R 20362448 intergenic not near genes chr3R 20362551 intergenic not near genes chr3R 20362654 intergenic not near genes chr3R_12_20360001 chr3R_20360001 RAL-371_125b 2268 chr3R 20433078 20433118 chr3R 20433210 20433258 6 139 2.5 3.0 2.8 1.6 180 chr3R 20433078 intron Gfrl - chr3R 20433168 intron Gfrl - chr3R 20433258 intron Gfrl - chr3R_6_20430001 chr3R_20430001 RAL-371_125b 2269 chr3R 20467069 20467102 chr3R 20467166 20467223 7 113 4.0 3.5 3.8 1.5 154 chr3R 20467069 intron Gfrl - chr3R 20467146 intron Gfrl - chr3R 20467223 intron Gfrl - chr3R_7_20465001 chr3R_20465001 RAL-371_125b 2270 chr3R 20506553 20506596 chr3R 20507406 20507449 BS 8 853 5.0 3.5 4.2 1.5 896 chr3R 20506553 intergenic Or92a + chr3R 20507001 intergenic CG4288 - chr3R 20507449 3` UTR CG4288 - chr3R_8_20505001 chr3R_20505001 RAL-371_125b 2271 chr3R 20512298 20512334 chr3R 20512431 20512467 11 132 6.0 2.0 4.0 2.2 169 chr3R 20512298 intron CG4288 - chr3R 20512382 5` UTR CG4288 - chr3R 20512467 5` UTR CG4288 - chr3R_11_20510001 chr3R_20510001 RAL-371_125b 2272 chr3R 20512998 20513007 chr3R 20515743 20515760 opus 4 2751 4.0 0.0 2.0 1.3 2762 chr3R 20512998 intergenic not near genes chr3R 20514379 intergenic not near genes chr3R 20515760 intergenic not near genes chr3R_4_20510001 chr3R_20510001 RAL-371_125b 2273 chr3R 20594438 20594499 chr3R 20594578 20594644 6 141 2.0 0.0 1.0 3.0 206 chr3R 20594438 intron bon + chr3R 20594541 intron bon + chr3R 20594644 intron bon + chr3R_6_20590001 chr3R_20590001 RAL-371_125b 2274 chr3R 20596154 20596196 chr3R 20596280 20596333 7 135 5.5 4.0 4.8 1.2 179 chr3R 20596154 intron bon + chr3R 20596244 intron bon + chr3R 20596333 intron bon + chr3R_7_20595001 chr3R_20595001 RAL-371_125b 2275 chr3R 20684185 20684227 chr3R 20684319 20684361 7 134 2.0 3.0 2.5 2.0 176 chr3R 20684185 intergenic not near genes chr3R 20684273 intergenic not near genes chr3R 20684361 intergenic not near genes chr3R_7_20680001 chr3R_20680001 RAL-371_125b 2276 chr3R 20733718 20733789 chr3R 20733860 20733880 15 139 4.0 5.5 4.8 2.6 162 chr3R 20733718 intergenic not near genes chr3R 20733799 intergenic not near genes chr3R 20733880 intergenic not near genes chr3R_15_20730001 chr3R_20730001 RAL-371_125b 2277 chr3R 20734193 20734216 chr3R 20734439 20734462 4 246 2.5 2.5 2.5 1.1 269 chr3R 20734193 intergenic not near genes chr3R 20734328 intergenic not near genes chr3R 20734462 intergenic not near genes chr3R_4_20730001 chr3R_20730001 RAL-371_125b 2278 chr3R 20734995 20735032 chr3R 20735096 20735168 5 120 2.0 4.0 3.0 1.2 173 chr3R 20734995 intergenic not near genes chr3R 20735082 intergenic not near genes chr3R 20735168 intergenic cdc2c + chr3R_5_20735001 chr3R_20735001 RAL-371_125b 2279 chr3R 20763825 20763891 chr3R 20763959 20763995 14 131 3.0 5.0 4.0 2.8 170 chr3R 20763825 intron Syp + chr3R 20763910 intron Syp + chr3R 20763995 intron Syp + chr3R_14_20760001 chr3R_20760001 RAL-371_125b 2280 chr3R 20787388 20787456 chr3R 20787529 20787592 12 140 4.0 2.0 3.0 3.0 204 chr3R 20787388 intron Syp + chr3R 20787490 intron Syp + chr3R 20787592 intron Syp + chr3R_12_20785001 chr3R_20785001 RAL-371_125b 2281 chr3R 20807866 20807881 chr3R 20814163 20814173 6 6293 18.0 11.0 14.5 0.4 6307 chr3R 20807866 3` UTR Syp + chr3R 20811020 exon Fancd2 - chr3R 20814173 intron Fancd2 - chr3R_6_20810001 chr3R_20810001 RAL-371_125b 2282 chr3R 20870202 20870263 chr3R 20870337 20870398 12 135 2.0 3.0 2.5 3.4 196 chr3R 20870202 intergenic not near genes chr3R 20870300 intergenic not near genes chr3R 20870398 intergenic not near genes chr3R_12_20870001 chr3R_20870001 RAL-371_125b 2283 chr3R 20878457 20878510 chr3R 20878588 20878641 6 131 2.0 4.5 3.2 1.4 184 chr3R 20878457 3` UTR CR44048 - chr3R 20878549 3` UTR CR44048 - chr3R 20878641 3` UTR CR44048 - chr3R_6_20875001 chr3R_20875001 RAL-371_125b 2284 chr3R 20898478 20898491 chr3R 20898622 20898635 4 144 2.5 5.0 3.8 0.8 157 chr3R 20898478 intergenic not near genes chr3R 20898556 intergenic not near genes chr3R 20898635 intergenic not near genes chr3R_4_20895001 chr3R_20895001 RAL-371_125b 2285 chr3R 20901305 20901370 chr3R 20901440 20901506 8 125 2.0 4.5 3.2 1.9 201 chr3R 20901305 intergenic not near genes chr3R 20901406 intergenic not near genes chr3R 20901506 intergenic CG5621 + chr3R_8_20900001 chr3R_20900001 RAL-371_125b 2286 chr3R 20942796 20942838 chr3R 20942892 20942938 4 100 4.5 3.0 3.8 0.8 142 chr3R 20942796 intron CG31191 - chr3R 20942867 intron CG31191 - chr3R 20942938 intron CG31191 - chr3R_4_20940001 chr3R_20940001 RAL-371_125b 2287 chr3R 20947060 20947101 chr3R 20947416 20947457 9 356 4.5 7.5 6.0 1.3 397 chr3R 20947060 intergenic not near genes chr3R 20947258 intergenic not near genes chr3R 20947457 intergenic not near genes chr3R_9_20945001 chr3R_20945001 RAL-371_125b 2288 chr3R 21076292 21076331 chr3R 21076421 21076460 6 128 2.0 3.5 2.8 1.6 168 chr3R 21076292 exon dmrt93B + chr3R 21076376 intron dmrt93B + chr3R 21076460 intron dmrt93B + chr3R_6_21075001 chr3R_21075001 RAL-371_125b 2289 chr3R 21123054 21123105 chr3R 21123224 21123261 10 166 8.0 0.5 4.2 1.9 207 chr3R 21123054 intron slmb - chr3R 21123158 intron slmb - chr3R 21123261 intron slmb - chr3R_10_21120001 chr3R_21120001 RAL-371_125b 2290 chr3R 21129815 21129950 chr3R 21129947 21130095 4 139 0.0 0.0 0.0 4.0 280 chr3R 21129815 intergenic Obp93a -,CG5793 +,Ice2 + chr3R 21129955 intergenic Obp93a -,Ice2 +,CG5793 + chr3R 21130095 intergenic Ice2 +,Obp93a -,CG5793 + chr3R_4_21125001 chr3R_21125001 RAL-371_125b 2291 chr3R 21141648 21141658 chr3R 21150179 21150183 Tirant 4 8528 10.5 6.5 8.5 0.4 8535 chr3R 21141648 intron SNF4Agamma + chr3R 21145916 intron SNF4Agamma + chr3R 21150183 intron SNF4Agamma + chr3R_4_21145001 chr3R_21145001 RAL-371_125b 2292 chr3R 21240414 21240472 chr3R 21240555 21240614 11 140 2.0 5.0 3.5 2.4 200 chr3R 21240414 intergenic not near genes chr3R 21240514 intergenic not near genes chr3R 21240614 intergenic not near genes chr3R_11_21240001 chr3R_21240001 RAL-371_125b 2293 chr3R 21393404 21393483 chr3R 21393575 21393636 10 162 3.5 0.0 1.8 3.6 232 chr3R 21393404 intergenic not near genes chr3R 21393520 intergenic not near genes chr3R 21393636 intergenic not near genes chr3R_10_21390001 chr3R_21390001 RAL-371_125b 2294 chr3R 21471983 21472027 chr3R 21472114 21472158 8 130 4.0 3.0 3.5 1.8 175 chr3R 21471983 intergenic not near genes chr3R 21472070 intergenic not near genes chr3R 21472158 intergenic not near genes chr3R_8_21470001 chr3R_21470001 RAL-371_125b 2295 chr3R 21506828 21506878 chr3R 21506964 21507014 10 135 2.5 3.0 2.8 2.6 186 chr3R 21506828 intron C15 + chr3R 21506921 intron C15 + chr3R 21507014 intron C15 + chr3R_10_21505001 chr3R_21505001 RAL-371_125b 2296 chr3R 21518014 21518262 chr3R 21518193 21518396 5 141 0.0 0.0 0.0 5.0 382 chr3R 21518014 intergenic not near genes chr3R 21518205 intergenic not near genes chr3R 21518396 intergenic not near genes chr3R_5_21515001 chr3R_21515001 RAL-371_125b 2297 chr3R 21519939 21520128 chr3R 21520090 21520272 13 147 0.0 0.0 0.0 13.0 333 chr3R 21519939 intergenic not near genes chr3R 21520106 intergenic not near genes chr3R 21520272 intergenic not near genes chr3R_13_21520001 chr3R_21520001 RAL-371_125b 2298 chr3R 21600218 21600262 chr3R 21600347 21600390 6 128 0.0 7.0 3.5 1.3 172 chr3R 21600218 intron InR - chr3R 21600304 intron InR - chr3R 21600390 intron InR - chr3R_6_21600001 chr3R_21600001 RAL-371_125b 2299 chr3R 21608996 21609013 chr3R 21611645 21611697 NOF 6 2670 5.0 2.5 3.8 1.2 2701 chr3R 21608996 intron InR - chr3R 21610346 intron InR - chr3R 21611697 intron InR - chr3R_6_21610001 chr3R_21610001 RAL-371_125b 2300 chr3R 21624072 21624111 chr3R 21624216 21624247 5 142 5.0 2.5 3.8 1.0 175 chr3R 21624072 exon E2f - chr3R 21624160 intron E2f - chr3R 21624247 intron E2f - chr3R_5_21620001 chr3R_21620001 RAL-371_125b 2301 chr3R 21651197 21651256 chr3R 21651325 21651384 13 128 3.5 3.0 3.2 3.1 187 chr3R 21651197 intron E2f - chr3R 21651290 intron E2f - chr3R 21651384 intron E2f - chr3R_13_21650001 chr3R_21650001 RAL-371_125b 2302 chr3R 21734815 21734878 chr3R 21734941 21734941 10 118 3.0 0.5 1.8 3.6 126 chr3R 21734815 intergenic not near genes chr3R 21734878 intergenic not near genes chr3R 21734941 intergenic not near genes chr3R_10_21730001 chr3R_21730001 RAL-371_125b 2303 chr3R 21761078 21761154 chr3R 21768520 21768563 mdg1 13 7439 4.0 5.5 4.8 2.2 7485 chr3R 21761078 exon CG42335 + chr3R 21764820 intron CG42335 + chr3R 21768563 exon CG42335 + chr3R_13_21760001 chr3R_21760001 RAL-371_125b 2304 chr3R 21784808 21784886 chr3R 21784956 21785033 7 147 3.0 1.5 2.2 2.2 225 chr3R 21784808 3` UTR,3` UTR CASK -,CRG - chr3R 21784920 3` UTR,3` UTR CASK -,CRG - chr3R 21785033 3` UTR,3` UTR CASK -,CRG - chr3R_7_21780001 chr3R_21780001 RAL-371_125b 2305 chr3R 21832734 21832807 chr3R 21832881 21832893 6 133 3.5 3.5 3.5 1.3 159 chr3R 21832734 exon Gr93a + chr3R 21832814 exon Gr93a + chr3R 21832893 exon Gr93a + chr3R_6_21830001 chr3R_21830001 RAL-371_125b 2306 chr3R 21836530 21836543 chr3R 21836641 21836672 4 124 2.5 4.0 3.2 1.0 142 chr3R 21836530 intergenic not near genes chr3R 21836601 intergenic not near genes chr3R 21836672 intergenic not near genes chr3R_4_21835001 chr3R_21835001 RAL-371_125b 2307 chr3R 21858250 21858279 chr3R 21858351 21858423 4 121 4.0 3.0 3.5 0.9 173 chr3R 21858250 intergenic not near genes chr3R 21858336 intergenic not near genes chr3R 21858423 intergenic not near genes chr3R_4_21855001 chr3R_21855001 RAL-371_125b 2308 chr3R 21897646 21897651 chr3R 21897775 21897780 4 129 10.5 6.0 8.2 0.4 134 chr3R 21897646 intron CG6678 + chr3R 21897713 intron CG6678 + chr3R 21897780 intron CG6678 + chr3R_4_21895001 chr3R_21895001 RAL-371_125b 2309 chr3R 21897657 21897706 chr3R 21897773 21897835 5 120 6.5 5.0 5.8 0.7 178 chr3R 21897657 intron CG6678 + chr3R 21897746 intron CG6678 + chr3R 21897835 intron CG6678 + chr3R_5_21895001 chr3R_21895001 RAL-371_125b 2310 chr3R 21907534 21907534 chr3R 28831801 28831802 8 6924268 13.0 16.5 14.8 0.5 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_8_25365001 chr3R_25365001 RAL-371_125b 2311 chr3R 8339246 8339247 chr3R 21907535 21907535 8 13568288 14.5 11.5 13.0 0.6 13568289 chr3R 8339246 intergenic not near genes chr3R 15123390 intron CG42788 - chr3R 21907535 intergenic CG6678 + chr3R_8_15120001 chr3R_15120001 RAL-371_125b 2312 chr3R 21907535 21907535 chr3R 28831801 28831802 17 6924266 13.0 16.5 14.8 1.1 6924267 chr3R 21907535 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_17_25365001 chr3R_25365001 RAL-371_125b 2313 chr3R 21907536 21907536 chr3R 28831801 28831802 27 6924266 13.5 16.5 15.0 1.7 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_27_25365001 chr3R_25365001 RAL-371_125b 2314 chr3R 21937180 21937232 chr3R 21937307 21937359 12 126 2.5 8.5 5.5 1.8 179 chr3R 21937180 intergenic not near genes chr3R 21937270 intergenic not near genes chr3R 21937359 intergenic not near genes chr3R_12_21935001 chr3R_21935001 RAL-371_125b 2315 chr3R 21983117 21983161 chr3R 21983227 21983292 8 127 2.5 3.5 3.0 2.0 175 chr3R 21983117 intron Eip93F + chr3R 21983204 intron Eip93F + chr3R 21983292 intron Eip93F + chr3R_8_21980001 chr3R_21980001 RAL-371_125b 2316 chr3R 22055066 22055119 chr3R 22055210 22055263 19 143 3.5 3.5 3.5 4.2 197 chr3R 22055066 intron how + chr3R 22055164 intron how + chr3R 22055263 intron how + chr3R_19_22055001 chr3R_22055001 RAL-371_125b 2317 chr3R 22153530 22153603 chr3R 22153660 22153733 22 127 3.5 3.0 3.2 5.2 203 chr3R 22153530 intron SKIP + chr3R 22153632 intron SKIP + chr3R 22153733 intron SKIP + chr3R_22_22150001 chr3R_22150001 RAL-371_125b 2318 chr3R 22190777 22190852 chr3R 22190905 22190980 13 122 3.5 2.5 3.0 3.2 203 chr3R 22190777 intron SKIP + chr3R 22190878 intron SKIP + chr3R 22190980 intron SKIP + chr3R_13_22190001 chr3R_22190001 RAL-371_125b 2319 chr3R 22234637 22234701 chr3R 22236006 22236070 pogo 9 1369 3.0 5.0 4.0 1.8 1433 chr3R 22234637 intron SKIP + chr3R 22235354 intron SKIP + chr3R 22236070 intron SKIP + chr3R_9_22235001 chr3R_22235001 RAL-371_125b 2320 chr3R 22239485 22239524 chr3R 22248583 22248612 roo 8 9097 3.0 3.0 3.0 2.0 9127 chr3R 22239485 intron SKIP + chr3R 22244048 intron SKIP + chr3R 22248612 intron SKIP + chr3R_8_22240001 chr3R_22240001 RAL-371_125b 2321 chr3R 22272306 22272324 chr3R 22272438 22272450 4 130 8.0 3.5 5.8 0.6 144 chr3R 22272306 intron SKIP + chr3R 22272378 intron SKIP + chr3R 22272450 intron SKIP + chr3R_4_22270001 chr3R_22270001 RAL-371_125b 2322 chr3R 22272326 22272370 chr3R 22272432 22272502 14 128 3.0 2.5 2.8 3.7 176 chr3R 22272326 intron SKIP + chr3R 22272414 intron SKIP + chr3R 22272502 intron SKIP + chr3R_14_22270001 chr3R_22270001 RAL-371_125b 2323 chr3R 22330608 22330671 chr3R 22332263 22332326 21 1661 31.5 35.0 33.2 0.6 1718 chr3R 22330608 intergenic CG7080 +,CG33721 + chr3R 22331467 exon CG33721 + chr3R 22332326 exon CG13862 + chr3R_21_22330001 chr3R_22330001 RAL-371_125b 2324 chr3R 22384296 22384324 chr3R 22384426 22384442 4 127 3.5 9.5 6.5 0.5 146 chr3R 22384296 exon CG43343 + chr3R 22384369 exon CG43343 + chr3R 22384442 exon CG43343 + chr3R_4_22380001 chr3R_22380001 RAL-371_125b 2325 chr3R 22428542 22428580 chr3R 22428668 22428706 13 126 4.0 5.5 4.8 2.2 164 chr3R 22428542 intron CG13847 - chr3R 22428624 intron CG13847 - chr3R 22428706 intron CG13847 - chr3R_13_22425001 chr3R_22425001 RAL-371_125b 2326 chr3R 22428584 22428604 chr3R 22428653 22428730 8 118 2.5 4.0 3.2 1.9 146 chr3R 22428584 intron CG13847 - chr3R 22428657 intron CG13847 - chr3R 22428730 intron CG13847 - chr3R_8_22425001 chr3R_22425001 RAL-371_125b 2327 chr3R 22433060 22433083 chr3R 22433202 22433233 7 149 6.5 6.5 6.5 0.9 173 chr3R 22433060 intron CG13847 - chr3R 22433146 intron CG13847 - chr3R 22433233 intron CG13847 - chr3R_7_22430001 chr3R_22430001 RAL-371_125b 2328 chr3R 22450518 22450574 chr3R 22453208 22453245 NOF 9 2685 3.5 7.5 5.5 1.4 2727 chr3R 22450518 intron CG34376 + chr3R 22451882 intron CG34376 + chr3R 22453245 intron CG34376 + chr3R_9_22450001 chr3R_22450001 RAL-371_125b 2329 chr3R 22503840 22503875 chr3R 22503970 22504005 13 130 0.0 2.0 1.0 6.5 165 chr3R 22503840 intron Octbeta1R + chr3R 22503922 intron Octbeta1R + chr3R 22504005 intron Octbeta1R + chr3R_13_22500001 chr3R_22500001 RAL-371_125b 2330 chr3R 22520719 22520769 chr3R 22520856 22520900 8 136 5.5 2.5 4.0 1.6 181 chr3R 22520719 intron CG5346 - chr3R 22520810 intron CG5346 - chr3R 22520900 intron CG5346 - chr3R_8_22520001 chr3R_22520001 RAL-371_125b 2331 chr3R 22538402 22538472 chr3R 22538537 22538602 16 133 3.0 5.0 4.0 3.2 200 chr3R 22538402 intron CG5326 - chr3R 22538502 intron CG5326 - chr3R 22538602 intron CG5326 - chr3R_16_22535001 chr3R_22535001 RAL-371_125b 2332 chr3R 22575289 22575344 chr3R 22575578 22575597 6 280 6.5 1.5 4.0 1.2 308 chr3R 22575289 intron CG33110 + chr3R 22575443 intron CG33110 + chr3R 22575597 intron CG33110 + chr3R_6_22575001 chr3R_22575001 RAL-371_125b 2333 chr3R 22672253 22672326 chr3R 22672396 22672469 8 142 3.5 3.0 3.2 1.9 216 chr3R 22672253 intron wake + chr3R 22672361 intron wake + chr3R 22672469 intron wake + chr3R_8_22670001 chr3R_22670001 RAL-371_125b 2334 chr3R 22769047 22769110 chr3R 22769174 22769237 15 127 5.0 5.5 5.2 2.4 190 chr3R 22769047 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769142 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R 22769237 intron,intron,exon CG7029 +,Usp12-46 +,CG43092 - chr3R_15_22765001 chr3R_22765001 RAL-371_125b 2335 chr3R 22829750 22829807 chr3R 22829875 22829929 14 130 2.0 2.5 2.2 4.4 179 chr3R 22829750 intergenic not near genes chr3R 22829840 intergenic not near genes chr3R 22829929 intergenic not near genes chr3R_14_22825001 chr3R_22825001 RAL-371_125b 2336 chr3R 22853246 22853295 chr3R 22853373 22853411 12 124 3.5 7.0 5.2 1.9 165 chr3R 22853246 intergenic not near genes chr3R 22853328 intergenic not near genes chr3R 22853411 intergenic not near genes chr3R_12_22850001 chr3R_22850001 RAL-371_125b 2337 chr3R 22863896 22863923 chr3R 22864010 22864051 6 125 3.0 7.0 5.0 1.0 155 chr3R 22863896 intergenic not near genes chr3R 22863974 intergenic not near genes chr3R 22864051 intergenic not near genes chr3R_6_22860001 chr3R_22860001 RAL-371_125b 2338 chr3R 22880883 22880914 chr3R 22881071 22881102 7 188 8.0 1.5 4.8 1.2 219 chr3R 22880883 intergenic not near genes chr3R 22880992 intergenic not near genes chr3R 22881102 intergenic not near genes chr3R_7_22880001 chr3R_22880001 RAL-371_125b 2339 chr3R 22881191 22881231 chr3R 22884946 22884986 Doc 6 3755 2.0 3.5 2.8 1.6 3795 chr3R 22881191 intergenic not near genes chr3R 22883088 intergenic not near genes chr3R 22884986 intergenic not near genes chr3R_6_22880001 chr3R_22880001 RAL-371_125b 2340 chr3R 22913215 22913229 chr3R 22913341 22913355 4 126 0.5 7.0 3.8 0.8 140 chr3R 22913215 intron klg + chr3R 22913285 intron klg + chr3R 22913355 intron klg + chr3R_4_22910001 chr3R_22910001 RAL-371_125b 2341 chr3R 22993466 22993512 chr3R 22993651 22993697 11 182 6.0 5.5 5.8 1.6 231 chr3R 22993466 intron Nha2 - chr3R 22993582 intron Nha2 - chr3R 22993697 intron Nha2 - chr3R_11_22990001 chr3R_22990001 RAL-371_125b 2342 chr3R 23020989 23021016 chr3R 23021115 23021142 5 126 0.0 6.0 3.0 1.2 153 chr3R 23020989 intergenic lmd - chr3R 23021066 intergenic lmd - chr3R 23021142 intergenic lmd - chr3R_5_23020001 chr3R_23020001 RAL-371_125b 2343 chr3R 23034774 23034843 chr3R 23035237 23035306 10 463 2.0 3.5 2.8 2.6 532 chr3R 23034774 intron CG13833 - chr3R 23035040 intron CG13833 - chr3R 23035306 intron CG13833 - chr3R_10_23035001 chr3R_23035001 RAL-371_125b 2344 chr3R 23073625 23073676 chr3R 23073759 23073809 11 133 7.0 2.5 4.8 1.9 184 chr3R 23073625 intron CG13830 - chr3R 23073717 intron CG13830 - chr3R 23073809 intron CG13830 - chr3R_11_23070001 chr3R_23070001 RAL-371_125b 2345 chr3R 23090365 23090427 chr3R 23090498 23090560 12 131 4.0 4.0 4.0 2.4 195 chr3R 23090365 intron CG13830 - chr3R 23090462 intron CG13830 - chr3R 23090560 intron CG13830 - chr3R_12_23090001 chr3R_23090001 RAL-371_125b 2346 chr3R 23163657 23163694 chr3R 23163791 23163828 8 132 5.0 4.5 4.8 1.4 171 chr3R 23163657 intergenic not near genes chr3R 23163742 intergenic not near genes chr3R 23163828 intergenic not near genes chr3R_8_23160001 chr3R_23160001 RAL-371_125b 2347 chr3R 23211951 23211991 chr3R 23212072 23212118 8 126 0.0 1.0 0.5 5.3 167 chr3R 23211951 intron cnc - chr3R 23212034 intron cnc - chr3R 23212118 intron cnc - chr3R_8_23210001 chr3R_23210001 RAL-371_125b 2348 chr3R 23245961 23245975 chr3R 23246093 23246107 4 132 6.0 2.0 4.0 0.8 146 chr3R 23245961 intron CG4467 - chr3R 23246034 intron CG4467 - chr3R 23246107 intron CG4467 - chr3R_4_23245001 chr3R_23245001 RAL-371_125b 2349 chr3R 23246000 23246008 chr3R 23246075 23246140 6 122 4.0 1.0 2.5 1.7 140 chr3R 23246000 intron CG4467 - chr3R 23246070 intron CG4467 - chr3R 23246140 intron CG4467 - chr3R_6_23245001 chr3R_23245001 RAL-371_125b 2350 chr3R 23319657 23319676 chr3R 23319785 23319804 7 128 0.0 4.5 2.2 2.2 147 chr3R 23319657 intron pnt - chr3R 23319730 intron pnt - chr3R 23319804 intron pnt - chr3R_7_23315001 chr3R_23315001 RAL-371_125b 2351 chr3R 23335394 23335466 chr3R 23335522 23335583 10 126 2.5 3.5 3.0 2.5 189 chr3R 23335394 intron pnt - chr3R 23335488 intron pnt - chr3R 23335583 intron pnt - chr3R_10_23335001 chr3R_23335001 RAL-371_125b 2352 chr3R 23453641 23453692 chr3R 23453769 23453821 11 125 3.5 3.0 3.2 2.6 180 chr3R 23453641 intron CG4374 - chr3R 23453731 intron CG4374 - chr3R 23453821 intron CG4374 - chr3R_11_23450001 chr3R_23450001 RAL-371_125b 2353 chr3R 23496168 23496194 chr3R 23496402 23496428 4 230 4.0 2.5 3.2 1.0 260 chr3R 23496168 intergenic not near genes chr3R 23496298 intergenic not near genes chr3R 23496428 intergenic not near genes chr3R_4_23495001 chr3R_23495001 RAL-371_125b 2354 chr3R 23496197 23496237 chr3R 23496398 23496434 4 201 1.0 2.0 1.5 1.6 237 chr3R 23496197 intergenic not near genes chr3R 23496316 intergenic not near genes chr3R 23496434 intergenic not near genes chr3R_4_23495001 chr3R_23495001 RAL-371_125b 2355 chr3R 23558358 23558426 chr3R 23560189 23560241 Bari1 9 1827 1.5 2.5 2.0 3.0 1883 chr3R 23558358 intron beat-IV + chr3R 23559300 intron beat-IV + chr3R 23560241 intron beat-IV + chr3R_9_23555001 chr3R_23555001 RAL-371_125b 2356 chr3R 23564393 23564467 chr3R 23564587 23564661 16 191 3.0 4.0 3.5 3.6 268 chr3R 23564393 intron beat-IV + chr3R 23564527 intron beat-IV + chr3R 23564661 intron beat-IV + chr3R_16_23560001 chr3R_23560001 RAL-371_125b 2357 chr3R 23684655 23684693 chr3R 23685186 23685229 roo 10 525 6.5 2.5 4.5 1.8 574 chr3R 23684655 exon CG18754 + chr3R 23684942 intron CG18754 + chr3R 23685229 exon CG18754 + chr3R_10_23680001 chr3R_23680001 RAL-371_125b 2358 chr3R 23688426 23688483 chr3R 23688567 23688623 12 139 6.5 0.0 3.2 2.9 197 chr3R 23688426 intergenic SPE + chr3R 23688524 intergenic SPE +,CG10254 - chr3R 23688623 intergenic CG10254 -,SPE + chr3R_12_23685001 chr3R_23685001 RAL-371_125b 2359 chr3R 23835375 23835428 chr3R 23844575 23844626 roo 5 9198 4.5 0.0 2.2 1.6 9251 chr3R 23835375 intron CG34355 + chr3R 23840000 intron CG34355 + chr3R 23844626 intron CG34355 + chr3R_5_23840001 chr3R_23840001 RAL-371_125b 2360 chr3R 23851047 23851082 chr3R 23858764 23858799 opus 7 7715 4.5 5.5 5.0 1.2 7752 chr3R 23851047 3` UTR CG34355 + chr3R 23854923 intergenic not near genes chr3R 23858799 intergenic not near genes chr3R_7_23850001 chr3R_23850001 RAL-371_125b 2361 chr3R 23888044 23888111 chr3R 23888180 23888247 13 136 4.0 4.0 4.0 2.6 203 chr3R 23888044 intron Pli - chr3R 23888146 intron Pli - chr3R 23888247 intron Pli - chr3R_13_23885001 chr3R_23885001 RAL-371_125b 2362 chr3R 23944876 23944931 chr3R 23945011 23945061 11 135 0.5 4.0 2.2 3.4 185 chr3R 23944876 intron CG12268 - chr3R 23944968 intron CG12268 - chr3R 23945061 exon CG12268 - chr3R_11_23940001 chr3R_23940001 RAL-371_125b 2363 chr3R 23948994 23949070 chr3R 23949121 23949121 19 123 4.0 2.5 3.2 4.5 127 chr3R 23948994 intergenic not near genes chr3R 23949058 intergenic not near genes chr3R 23949121 intergenic not near genes chr3R_19_23945001 chr3R_23945001 RAL-371_125b 2364 chr3R 24011618 24011677 chr3R 24011751 24011809 7 133 2.5 3.0 2.8 1.8 191 chr3R 24011618 intron KrT95D - chr3R 24011714 intron KrT95D - chr3R 24011809 intron KrT95D - chr3R_7_24010001 chr3R_24010001 RAL-371_125b 2365 chr3R 24072067 24072107 chr3R 24072555 24072555 jockey 12 482 8.0 10.5 9.2 1.2 488 chr3R 24072067 intron 4EHP - chr3R 24072311 intron 4EHP - chr3R 24072555 intron 4EHP - chr3R_12_24070001 chr3R_24070001 RAL-371_125b 2366 chr3R 24076875 24076937 chr3R 24078386 24078454 hobo 9 1512 2.0 2.5 2.2 2.8 1579 chr3R 24076875 intron 4EHP - chr3R 24077664 intron 4EHP - chr3R 24078454 intron 4EHP - chr3R_9_24075001 chr3R_24075001 RAL-371_125b 2367 chr3R 24100857 24100880 chr3R 24101034 24101071 7 188 2.0 4.0 3.0 1.8 214 chr3R 24100857 intron 4EHP - chr3R 24100964 intron 4EHP - chr3R 24101071 intron 4EHP - chr3R_7_24100001 chr3R_24100001 RAL-371_125b 2368 chr3R 24207175 24207233 chr3R 24212301 24212359 flea 10 5124 5.0 4.5 4.8 1.7 5184 chr3R 24207175 intron twin - chr3R 24209767 intron twin - chr3R 24212359 intron twin - chr3R_10_24205001 chr3R_24205001 RAL-371_125b 2369 chr3R 24431549 24431627 chr3R 24431678 24431756 23 128 5.0 2.5 3.8 4.8 207 chr3R 24431549 intron nAChRalpha1 - chr3R 24431652 intron nAChRalpha1 - chr3R 24431756 intron nAChRalpha1 - chr3R_23_24430001 chr3R_24430001 RAL-371_125b 2370 chr3R 24434196 24434260 chr3R 24434324 24434350 8 121 4.0 5.5 4.8 1.4 154 chr3R 24434196 intron nAChRalpha1 - chr3R 24434273 intron nAChRalpha1 - chr3R 24434350 intron nAChRalpha1 - chr3R_8_24430001 chr3R_24430001 RAL-371_125b 2371 chr3R 24441577 24441646 chr3R 24441908 24441928 12 326 3.5 4.5 4.0 2.4 351 chr3R 24441577 intron nAChRalpha1 - chr3R 24441752 intron nAChRalpha1 - chr3R 24441928 intron nAChRalpha1 - chr3R_12_24440001 chr3R_24440001 RAL-371_125b 2372 chr3R 24493250 24493303 chr3R 24493518 24493557 BS 7 274 0.5 4.0 2.2 2.2 307 chr3R 24493250 intergenic not near genes chr3R 24493404 intergenic not near genes chr3R 24493557 intergenic not near genes chr3R_7_24490001 chr3R_24490001 RAL-371_125b 2373 chr3R 24527764 24527823 chr3R 24527905 24527964 9 141 4.5 2.5 3.5 2.0 200 chr3R 24527764 intergenic CG13618 +,CG6607 + chr3R 24527864 intergenic CG6607 +,CG13618 + chr3R 24527964 intergenic CG6607 +,CG13618 + chr3R_9_24525001 chr3R_24525001 RAL-371_125b 2374 chr3R 24594631 24594663 chr3R 24594921 24594938 pogo 7 288 6.0 5.0 5.5 1.1 307 chr3R 24594631 intron mld + chr3R 24594784 intron mld + chr3R 24594938 intron mld + chr3R_7_24590001 chr3R_24590001 RAL-371_125b 2375 chr3R 24624330 24624395 chr3R 24624468 24624529 10 138 3.5 6.0 4.8 1.7 199 chr3R 24624330 intron Syx18 - chr3R 24624430 intron Syx18 - chr3R 24624529 exon Syx18 - chr3R_10_24620001 chr3R_24620001 RAL-371_125b 2376 chr3R 24667560 24667596 chr3R 24667687 24667717 6 126 4.5 0.0 2.2 1.9 157 chr3R 24667560 intron slo + chr3R 24667638 intron slo + chr3R 24667717 intron slo + chr3R_6_24665001 chr3R_24665001 RAL-371_125b 2377 chr3R 24670149 24670194 chr3R 24670284 24670327 7 135 3.5 0.5 2.0 2.3 178 chr3R 24670149 intron slo + chr3R 24670238 intron slo + chr3R 24670327 intron slo + chr3R_7_24670001 chr3R_24670001 RAL-371_125b 2378 chr3R 24671208 24671242 chr3R 24671335 24671369 6 126 3.5 5.5 4.5 1.1 161 chr3R 24671208 intron slo + chr3R 24671288 intron slo + chr3R 24671369 intron slo + chr3R_6_24670001 chr3R_24670001 RAL-371_125b 2379 chr3R 24730058 24730069 chr3R 24732486 24732497 Doc 4 2428 6.5 2.0 4.2 0.8 2439 chr3R 24730058 intron tok + chr3R 24731278 intron tok + chr3R 24732497 intron tok + chr3R_4_24730001 chr3R_24730001 RAL-371_125b 2380 chr3R 24785042 24785092 chr3R 24785168 24785218 5 120 5.0 4.5 4.8 0.9 176 chr3R 24785042 3` UTR CG5805 - chr3R 24785130 3` UTR CG5805 - chr3R 24785218 3` UTR CG5805 - chr3R_5_24785001 chr3R_24785001 RAL-371_125b 2381 chr3R 24912455 24912508 chr3R 24912579 24912635 12 131 2.0 0.0 1.0 6.0 180 chr3R 24912455 intergenic not near genes chr3R 24912545 intergenic CR44267 + chr3R 24912635 intergenic CR44267 + chr3R_12_24910001 chr3R_24910001 RAL-371_125b 2382 chr3R 24927086 24927148 chr3R 24931927 24931989 Doc 10 4839 3.5 3.0 3.2 2.4 4903 chr3R 24927086 intergenic Trf4-2 + chr3R 24929538 intergenic not near genes chr3R 24931989 intergenic CG11771 + chr3R_10_24925001 chr3R_24925001 RAL-371_125b 2383 chr3R 24974866 24974932 chr3R 24974995 24975061 20 129 4.5 3.5 4.0 4.0 195 chr3R 24974866 intergenic not near genes chr3R 24974964 intergenic not near genes chr3R 24975061 intergenic not near genes chr3R_20_24970001 chr3R_24970001 RAL-371_125b 2384 chr3R 25004849 25004921 chr3R 25004982 25005054 9 128 4.5 2.5 3.5 2.0 205 chr3R 25004849 intron tnc + chr3R 25004952 intron tnc + chr3R 25005054 intron tnc + chr3R_9_25000001 chr3R_25000001 RAL-371_125b 2385 chr3R 25027501 25027568 chr3R 25027764 25027805 12 261 4.0 2.5 3.2 2.9 304 chr3R 25027501 intron Hr96 + chr3R 25027653 intron Hr96 + chr3R 25027805 intron Hr96 + chr3R_12_25025001 chr3R_25025001 RAL-371_125b 2386 chr3R 25072715 25072773 chr3R 25072857 25072915 17 142 7.0 6.5 6.8 2.2 200 chr3R 25072715 intergenic CG11836 +,CG9996 - chr3R 25072815 3` UTR CG9996 - chr3R 25072915 exon CG9996 - chr3R_17_25070001 chr3R_25070001 RAL-371_125b 2387 chr3R 25072775 25072784 chr3R 25072851 25072926 5 129 6.5 5.5 6.0 0.7 151 chr3R 25072775 3` UTR CG9996 - chr3R 25072850 3` UTR CG9996 - chr3R 25072926 exon CG9996 - chr3R_5_25070001 chr3R_25070001 RAL-371_125b 2388 chr3R 25368434 25368505 chr3R 25368602 25368677 6 168 4.0 0.0 2.0 2.0 243 chr3R 25368434 intron Fur1 - chr3R 25368556 intron Fur1 - chr3R 25368677 intron Fur1 - chr3R_6_25365001 chr3R_25365001 RAL-371_125b 2389 chr3R 25396071 25396139 chr3R 25396233 25396296 13 159 4.5 4.5 4.5 2.4 225 chr3R 25396071 intron Fur1 - chr3R 25396184 intron Fur1 - chr3R 25396296 intron Fur1 - chr3R_13_25395001 chr3R_25395001 RAL-371_125b 2390 chr3R 25514401 25514442 chr3R 25514532 25514573 6 131 0.0 6.0 3.0 1.5 172 chr3R 25514401 intergenic not near genes chr3R 25514487 intergenic not near genes chr3R 25514573 intergenic not near genes chr3R_6_25510001 chr3R_25510001 RAL-371_125b 2391 chr3R 25520951 25520982 chr3R 25521100 25521125 8 147 2.5 1.0 1.8 2.9 174 chr3R 25520951 intron msi + chr3R 25521038 intron msi + chr3R 25521125 intron msi + chr3R_8_25520001 chr3R_25520001 RAL-371_125b 2392 chr3R 25549890 25549935 chr3R 25550009 25550073 4 132 6.0 4.0 5.0 0.7 183 chr3R 25549890 intron msi + chr3R 25549982 intron msi + chr3R 25550073 intron msi + chr3R_4_25545001 chr3R_25545001 RAL-371_125b 2393 chr3R 25571839 25571871 chr3R 25571977 25572009 10 137 5.0 3.5 4.2 1.9 170 chr3R 25571839 intron msi + chr3R 25571924 intron msi + chr3R 25572009 intron msi + chr3R_10_25570001 chr3R_25570001 RAL-371_125b 2394 chr3R 25591359 25591396 chr3R 25591487 25591524 4 123 9.0 1.0 5.0 0.7 165 chr3R 25591359 intron msi + chr3R 25591442 intron msi + chr3R 25591524 intron,3` UTR msi +,ymp - chr3R_4_25590001 chr3R_25590001 RAL-371_125b 2395 chr3R 25608434 25608496 chr3R 25608576 25608649 6 151 2.0 0.0 1.0 3.0 215 chr3R 25608434 intron ymp - chr3R 25608542 intron ymp - chr3R 25608649 intron ymp - chr3R_6_25605001 chr3R_25605001 RAL-371_125b 2396 chr3R 25703144 25703157 chr3R 25703722 25703728 4 576 6.5 5.5 6.0 0.6 584 chr3R 25703144 intron LpR2 - chr3R 25703436 intron LpR2 - chr3R 25703728 intron LpR2 - chr3R_4_25700001 chr3R_25700001 RAL-371_125b 2397 chr3R 25703161 25703215 chr3R 25703718 25703759 6 564 3.5 5.5 4.5 1.1 598 chr3R 25703161 intron LpR2 - chr3R 25703460 intron LpR2 - chr3R 25703759 intron LpR2 - chr3R_6_25700001 chr3R_25700001 RAL-371_125b 2398 chr3R 25725795 25725854 chr3R 25735005 25735064 roo 12 9210 3.0 3.5 3.2 2.9 9269 chr3R 25725795 intron LpR2 - chr3R 25730430 intron LpR2 - chr3R 25735064 intron LpR2 - chr3R_12_25730001 chr3R_25730001 RAL-371_125b 2399 chr3R 25765830 25765901 chr3R 25765959 25766000 13 120 4.0 7.0 5.5 2.0 170 chr3R 25765830 intergenic not near genes chr3R 25765915 intergenic not near genes chr3R 25766000 intergenic not near genes chr3R_13_25765001 chr3R_25765001 RAL-371_125b 2400 chr3R 25781980 25782027 chr3R 25782106 25782153 11 124 2.0 5.0 3.5 2.4 173 chr3R 25781980 intergenic not near genes chr3R 25782066 intergenic not near genes chr3R 25782153 intergenic not near genes chr3R_11_25780001 chr3R_25780001 RAL-371_125b 2401 chr3R 25805326 25805357 chr3R 25805609 25805640 6 283 5.0 3.5 4.2 1.2 314 chr3R 25805326 intergenic not near genes chr3R 25805483 intergenic not near genes chr3R 25805640 intergenic not near genes chr3R_6_25805001 chr3R_25805001 RAL-371_125b 2402 chr3R 25805358 25805383 chr3R 25805599 25805666 8 277 3.0 3.0 3.0 2.0 308 chr3R 25805358 intergenic not near genes chr3R 25805512 intergenic not near genes chr3R 25805666 intergenic not near genes chr3R_8_25805001 chr3R_25805001 RAL-371_125b 2403 chr3R 25810288 25810321 chr3R 25810417 25810459 4 137 6.5 3.5 5.0 0.7 171 chr3R 25810288 intergenic not near genes chr3R 25810374 intergenic not near genes chr3R 25810459 intergenic not near genes chr3R_4_25810001 chr3R_25810001 RAL-371_125b 2404 chr3R 25832668 25832716 chr3R 25841889 25841948 roo 10 9228 2.5 7.0 4.8 1.7 9280 chr3R 25832668 exon alpha4GT2 + chr3R 25837308 intron alpha4GT2 + chr3R 25841948 exon alpha4GT2 + chr3R_10_25835001 chr3R_25835001 RAL-371_125b 2405 chr3R 25843619 25843657 chr3R 25843779 25843837 9 178 2.5 4.0 3.2 2.1 218 chr3R 25843619 intergenic CR45653 + chr3R 25843728 intergenic CR45653 + chr3R 25843837 intergenic CR45653 + chr3R_9_25840001 chr3R_25840001 RAL-371_125b 2406 chr3R 25847697 25847716 chr3R 25847852 25847930 5 197 5.0 2.5 3.8 1.0 233 chr3R 25847697 intergenic CR45656 -,CR45657 + chr3R 25847814 intergenic CR45656 -,CR45657 + chr3R 25847930 intergenic CR45657 +,CR45656 - chr3R_5_25845001 chr3R_25845001 RAL-371_125b 2407 chr3R 25869179 25869231 chr3R 25869404 25869455 13 240 5.5 2.5 4.0 2.6 276 chr3R 25869179 intron CG5890 + chr3R 25869317 intron CG5890 + chr3R 25869455 intron CG5890 + chr3R_13_25865001 chr3R_25865001 RAL-371_125b 2408 chr3R 25895216 25895292 chr3R 25895346 25895422 16 130 3.0 4.0 3.5 3.6 206 chr3R 25895216 intergenic CG5913 + chr3R 25895319 intergenic CG5913 + chr3R 25895422 intergenic CG5913 +,CG5948 + chr3R_16_25895001 chr3R_25895001 RAL-371_125b 2409 chr3R 25920805 25920849 chr3R 25920936 25920980 9 131 6.0 0.0 3.0 2.2 175 chr3R 25920805 exon CG42235 + chr3R 25920892 3` UTR CG42235 + chr3R 25920980 3` UTR CG42235 + chr3R_9_25920001 chr3R_25920001 RAL-371_125b 2410 chr3R 25997228 25997267 chr3R 25997365 25997393 5 133 2.0 3.0 2.5 1.4 165 chr3R 25997228 intergenic CG43116 -,E(spl)mdelta-HLH + chr3R 25997310 intergenic E(spl)mdelta-HLH +,CG43116 - chr3R 25997393 intergenic E(spl)mdelta-HLH +,CG43116 - chr3R_5_25995001 chr3R_25995001 RAL-371_125b 2411 chr3R 26093803 26093836 chr3R 26093931 26093964 6 127 6.0 3.5 4.8 1.0 161 chr3R 26093803 intron dys - chr3R 26093884 intron dys - chr3R 26093964 intron dys - chr3R_6_26090001 chr3R_26090001 RAL-371_125b 2412 chr3R 26093839 26093873 chr3R 26093923 26093970 7 115 3.0 2.5 2.8 1.8 131 chr3R 26093839 intron dys - chr3R 26093904 intron dys - chr3R 26093970 intron dys - chr3R_7_26090001 chr3R_26090001 RAL-371_125b 2413 chr3R 26121898 26121961 chr3R 26122045 26122108 4 140 2.0 1.5 1.8 1.4 210 chr3R 26121898 intron CG31324 + chr3R 26122003 intron CG31324 + chr3R 26122108 intron CG31324 + chr3R_4_26120001 chr3R_26120001 RAL-371_125b 2414 chr3R 26122420 26122465 chr3R 26122543 26122591 6 126 6.5 6.0 6.2 0.8 171 chr3R 26122420 intron CG31324 + chr3R 26122506 intron CG31324 + chr3R 26122591 intron CG31324 + chr3R_6_26120001 chr3R_26120001 RAL-371_125b 2415 chr3R 26123143 26123193 chr3R 26123272 26123322 7 129 2.0 2.0 2.0 2.3 179 chr3R 26123143 intron CG31324 + chr3R 26123232 intron CG31324 + chr3R 26123322 intron CG31324 + chr3R_7_26120001 chr3R_26120001 RAL-371_125b 2416 chr3R 26126227 26126291 chr3R 26126381 26126446 9 152 3.0 4.5 3.8 1.9 219 chr3R 26126227 intron CG31324 + chr3R 26126336 intron CG31324 + chr3R 26126446 intron CG31324 + chr3R_9_26125001 chr3R_26125001 RAL-371_125b 2417 chr3R 26144655 26144719 chr3R 26144783 26144847 11 126 5.0 5.5 5.2 1.8 192 chr3R 26144655 intergenic not near genes chr3R 26144751 intergenic not near genes chr3R 26144847 intergenic not near genes chr3R_11_26140001 chr3R_26140001 RAL-371_125b 2418 chr3R 26229189 26229249 chr3R 26229323 26229359 10 126 2.5 0.0 1.2 4.5 170 chr3R 26229189 intergenic not near genes chr3R 26229274 intergenic not near genes chr3R 26229359 intergenic not near genes chr3R_10_26225001 chr3R_26225001 RAL-371_125b 2419 chr3R 26242070 26242131 chr3R 26242210 26242271 9 139 2.0 1.5 1.8 3.2 201 chr3R 26242070 intron CR42745 + chr3R 26242170 intron CR42745 + chr3R 26242271 intron CR42745 + chr3R_9_26240001 chr3R_26240001 RAL-371_125b 2420 chr3R 26284184 26284250 chr3R 26284343 26284407 13 157 2.5 2.5 2.5 3.7 223 chr3R 26284184 intergenic not near genes chr3R 26284296 intergenic not near genes chr3R 26284407 intergenic not near genes chr3R_13_26280001 chr3R_26280001 RAL-371_125b 2421 chr3R 26292079 26292122 chr3R 26292209 26292252 6 130 5.5 4.5 5.0 1.0 173 chr3R 26292079 intergenic not near genes chr3R 26292166 intergenic not near genes chr3R 26292252 intergenic not near genes chr3R_6_26290001 chr3R_26290001 RAL-371_125b 2422 chr3R 26294677 26294719 chr3R 26294804 26294847 7 126 4.5 5.5 5.0 1.2 170 chr3R 26294677 intergenic not near genes chr3R 26294762 intergenic not near genes chr3R 26294847 intergenic not near genes chr3R_7_26290001 chr3R_26290001 RAL-371_125b 2423 chr3R 26326647 26326678 chr3R 26326775 26326806 4 126 3.0 4.0 3.5 0.9 159 chr3R 26326647 intron CG33970 + chr3R 26326726 intron CG33970 + chr3R 26326806 intron CG33970 + chr3R_4_26325001 chr3R_26325001 RAL-371_125b 2424 chr3R 26349220 26349238 chr3R 26349366 26349384 5 146 4.5 0.0 2.2 1.6 164 chr3R 26349220 intron CG33970 + chr3R 26349302 intron CG33970 + chr3R 26349384 intron CG33970 + chr3R_5_26345001 chr3R_26345001 RAL-371_125b 2425 chr3R 26374790 26374852 chr3R 26374942 26375004 11 150 3.5 3.0 3.2 2.6 214 chr3R 26374790 intergenic not near genes chr3R 26374897 intergenic not near genes chr3R 26375004 intergenic not near genes chr3R_11_26370001 chr3R_26370001 RAL-371_125b 2426 chr3R 26376282 26376339 chr3R 26385492 26385514 roo 13 9207 3.0 5.5 4.2 2.5 9232 chr3R 26376282 intergenic not near genes chr3R 26380898 intergenic not near genes chr3R 26385514 intergenic not near genes chr3R_13_26380001 chr3R_26380001 RAL-371_125b 2427 chr3R 26488354 26488362 chr3R 26488499 26488507 4 145 8.0 7.0 7.5 0.5 153 chr3R 26488354 intron plum - chr3R 26488430 intron plum - chr3R 26488507 intron plum - chr3R_4_26485001 chr3R_26485001 RAL-371_125b 2428 chr3R 26509305 26509361 chr3R 26509461 26509517 9 153 5.5 4.0 4.8 1.6 212 chr3R 26509305 intron plum - chr3R 26509411 intron plum - chr3R 26509517 intron plum - chr3R_9_26505001 chr3R_26505001 RAL-371_125b 2429 chr3R 26510476 26510498 chr3R 26519581 26519603 roo 6 9105 3.5 4.5 4.0 1.2 9127 chr3R 26510476 intron plum - chr3R 26515040 intron plum - chr3R 26519603 intron,5` UTR plum -,CR45226 + chr3R_6_26515001 chr3R_26515001 RAL-371_125b 2430 chr3R 26542000 26542070 chr3R 26542141 26542211 10 141 1.5 2.0 1.8 3.6 211 chr3R 26542000 intron scrib + chr3R 26542106 intron scrib + chr3R 26542211 intron scrib + chr3R_10_26540001 chr3R_26540001 RAL-371_125b 2431 chr3R 26558282 26558359 chr3R 26565645 26565659 Stalker4 14 7353 5.0 3.5 4.2 2.7 7377 chr3R 26558282 intron scrib + chr3R 26561970 intron scrib + chr3R 26565659 intron scrib + chr3R_14_26560001 chr3R_26560001 RAL-371_125b 2432 chr3R 26574961 26575038 chr3R 26575090 26575167 14 127 7.0 4.0 5.5 2.2 206 chr3R 26574961 exon scrib + chr3R 26575064 intron scrib + chr3R 26575167 exon scrib + chr3R_14_26575001 chr3R_26575001 RAL-371_125b 2433 chr3R 26607694 26607761 chr3R 26607820 26607887 14 124 4.5 4.5 4.5 2.5 193 chr3R 26607694 5` UTR CR44951 + chr3R 26607790 5` UTR CR44951 + chr3R 26607887 5` UTR CR44951 + chr3R_14_26605001 chr3R_26605001 RAL-371_125b 2434 chr3R 26611296 26611372 chr3R 26611422 26611498 10 126 2.5 1.5 2.0 3.3 202 chr3R 26611296 intergenic not near genes chr3R 26611397 intergenic not near genes chr3R 26611498 intergenic not near genes chr3R_10_26610001 chr3R_26610001 RAL-371_125b 2435 chr3R 26641591 26641661 chr3R 26641728 26641788 16 136 5.5 4.5 5.0 2.7 197 chr3R 26641591 intergenic not near genes chr3R 26641690 intergenic not near genes chr3R 26641788 intergenic not near genes chr3R_16_26640001 chr3R_26640001 RAL-371_125b 2436 chr3R 26642696 26642748 chr3R 26643140 26643192 jockey 12 444 8.0 6.5 7.2 1.5 496 chr3R 26642696 intergenic not near genes chr3R 26642944 intergenic not near genes chr3R 26643192 intergenic not near genes chr3R_12_26640001 chr3R_26640001 RAL-371_125b 2437 chr3R 26660599 26660673 chr3R 26660733 26660782 24 125 3.0 4.0 3.5 5.3 183 chr3R 26660599 intron beat-VII - chr3R 26660690 intron beat-VII - chr3R 26660782 intron beat-VII - chr3R_24_26660001 chr3R_26660001 RAL-371_125b 2438 chr3R 26669617 26669689 chr3R 26669749 26669821 13 132 2.0 4.5 3.2 3.1 204 chr3R 26669617 intron beat-VII - chr3R 26669719 intron beat-VII - chr3R 26669821 intron beat-VII - chr3R_13_26665001 chr3R_26665001 RAL-371_125b 2439 chr3R 26688276 26688335 chr3R 26688410 26688469 13 133 2.5 4.0 3.2 3.1 193 chr3R 26688276 intergenic not near genes chr3R 26688372 intergenic not near genes chr3R 26688469 intergenic not near genes chr3R_13_26685001 chr3R_26685001 RAL-371_125b 2440 chr3R 26770211 26770264 chr3R 26770338 26770391 13 127 4.0 3.0 3.5 2.9 180 chr3R 26770211 intergenic CR45563 + chr3R 26770301 intergenic CR45563 + chr3R 26770391 intergenic not near genes chr3R_13_26770001 chr3R_26770001 RAL-371_125b 2441 chr3R 26810511 26810569 chr3R 26811036 26811104 roo 9 534 4.5 4.5 4.5 1.6 593 chr3R 26810511 intron Tl + chr3R 26810808 intron Tl + chr3R 26811104 intron Tl + chr3R_9_26810001 chr3R_26810001 RAL-371_125b 2442 chr3R 26852451 26852464 chr3R 26852588 26852601 4 136 0.5 5.5 3.0 1.0 150 chr3R 26852451 intron Lerp - chr3R 26852526 intron Lerp - chr3R 26852601 intron Lerp - chr3R_4_26850001 chr3R_26850001 RAL-371_125b 2443 chr3R 27007359 27007425 chr3R 27016544 27016600 roo 14 9184 3.0 3.0 3.0 3.5 9241 chr3R 27007359 intron RYa-R + chr3R 27011980 intron RYa-R + chr3R 27016600 intron RYa-R + chr3R_14_27010001 chr3R_27010001 RAL-371_125b 2444 chr3R 27027633 27027701 chr3R 27027767 27027833 7 132 3.5 3.0 3.2 1.7 200 chr3R 27027633 intron RYa-R + chr3R 27027733 intron RYa-R + chr3R 27027833 intron RYa-R + chr3R_7_27025001 chr3R_27025001 RAL-371_125b 2445 chr3R 27028682 27028749 chr3R 27028811 27028878 11 128 1.5 3.0 2.2 3.4 196 chr3R 27028682 intron RYa-R + chr3R 27028780 intron RYa-R + chr3R 27028878 intron RYa-R + chr3R_11_27025001 chr3R_27025001 RAL-371_125b 2446 chr3R 27038399 27038456 chr3R 27039513 27039558 8 1112 4.5 3.0 3.8 1.7 1159 chr3R 27038399 intron RYa-R + chr3R 27038978 intron RYa-R + chr3R 27039558 intron RYa-R + chr3R_8_27035001 chr3R_27035001 RAL-371_125b 2447 chr3R 27133470 27133545 chr3R 27133637 27133712 15 167 4.5 1.5 3.0 3.8 242 chr3R 27133470 intron CG6051 - chr3R 27133591 intron CG6051 - chr3R 27133712 intron CG6051 - chr3R_15_27130001 chr3R_27130001 RAL-371_125b 2448 chr3R 27140470 27140533 chr3R 27148130 27148193 412 10 7657 3.0 5.0 4.0 2.0 7723 chr3R 27140470 intron CG6051 - chr3R 27144332 intron CG6051 - chr3R 27148193 intron CG6051 - chr3R_10_27140001 chr3R_27140001 RAL-371_125b 2449 chr3R 27292257 27292273 chr3R 27292399 27292435 4 153 2.5 2.5 2.5 1.1 178 chr3R 27292257 intergenic CG3348 - chr3R 27292346 intergenic CG3348 - chr3R 27292435 intergenic CG3348 - chr3R_4_27290001 chr3R_27290001 RAL-371_125b 2450 chr3R 27315947 27316011 chr3R 27316073 27316137 16 122 3.5 3.0 3.2 3.8 190 chr3R 27315947 intron CG3339 - chr3R 27316042 intron CG3339 - chr3R 27316137 exon CG3339 - chr3R_16_27315001 chr3R_27315001 RAL-371_125b 2451 chr3R 27317053 27317102 chr3R 27317181 27317227 9 126 6.5 4.5 5.5 1.4 174 chr3R 27317053 intron CG3339 - chr3R 27317140 intron CG3339 - chr3R 27317227 exon CG3339 - chr3R_9_27315001 chr3R_27315001 RAL-371_125b 2452 chr3R 27329428 27329436 chr3R 27329554 27329562 5 126 5.0 2.0 3.5 1.1 134 chr3R 27329428 intergenic CG3330 - chr3R 27329495 intergenic CG3330 - chr3R 27329562 intergenic CG3330 - chr3R_5_27325001 chr3R_27325001 RAL-371_125b 2453 chr3R 27329442 27329492 chr3R 27329552 27329619 6 124 2.5 2.0 2.2 1.9 177 chr3R 27329442 intergenic CG3330 - chr3R 27329530 intergenic CG3330 - chr3R 27329619 intergenic CG3330 - chr3R_6_27325001 chr3R_27325001 RAL-371_125b 2454 chr3R 27335897 27335947 chr3R 27336028 27336067 7 128 3.0 0.0 1.5 2.8 170 chr3R 27335897 intergenic not near genes chr3R 27335982 intergenic not near genes chr3R 27336067 intergenic not near genes chr3R_7_27335001 chr3R_27335001 RAL-371_125b 2455 chr3R 27342748 27342816 chr3R 27351379 27351447 Tirant 14 8626 3.5 5.0 4.2 2.7 8699 chr3R 27342748 intron CG42534 + chr3R 27347098 intron CG42534 + chr3R 27351447 intron CG42534 + chr3R_14_27345001 chr3R_27345001 RAL-371_125b 2456 chr3R 27353287 27353320 chr3R 27353422 27353455 7 135 5.5 4.0 4.8 1.2 168 chr3R 27353287 intron CG42534 + chr3R 27353371 intron CG42534 + chr3R 27353455 intron CG42534 + chr3R_7_27350001 chr3R_27350001 RAL-371_125b 2457 chr3R 27377424 27377494 chr3R 27377562 27377632 12 131 2.5 4.0 3.2 2.9 208 chr3R 27377424 3` UTR side - chr3R 27377528 3` UTR side - chr3R 27377632 3` UTR side - chr3R_12_27375001 chr3R_27375001 RAL-371_125b 2458 chr3R 27398521 27398574 chr3R 27398647 27398700 6 126 2.5 0.5 1.5 2.4 179 chr3R 27398521 intron side - chr3R 27398610 intron side - chr3R 27398700 intron side - chr3R_6_27395001 chr3R_27395001 RAL-371_125b 2459 chr3R 27426122 27426167 chr3R 27426256 27426261 6 121 4.0 9.0 6.5 0.8 139 chr3R 27426122 intron side - chr3R 27426192 intron side - chr3R 27426261 intron side - chr3R_6_27425001 chr3R_27425001 RAL-371_125b 2460 chr3R 27521117 27521174 chr3R 27530376 27530433 roo 6 9259 6.5 4.0 5.2 1.0 9316 chr3R 27521117 intron CG12885 + chr3R 27525775 intron CG12885 + chr3R 27530433 intron CG12885 + chr3R_6_27525001 chr3R_27525001 RAL-371_125b 2461 chr3R 27648563 27648848 chr3R 27648676 27648964 14 122 9.5 0.0 4.8 2.4 401 chr3R 27648563 intron tau - chr3R 27648764 intron tau - chr3R 27648964 intron tau - chr3R_14_27645001 chr3R_27645001 RAL-371_125b 2462 chr3R 27648850 27648867 chr3R 27648977 27648992 4 126 5.0 8.5 6.8 0.5 142 chr3R 27648850 intron tau - chr3R 27648921 intron tau - chr3R 27648992 intron tau - chr3R_4_27645001 chr3R_27645001 RAL-371_125b 2463 chr3R 27725545 27725585 chr3R 27731037 27731072 I-element 8 5491 3.5 7.5 5.5 1.2 5527 chr3R 27725545 intergenic not near genes chr3R 27728308 intergenic not near genes chr3R 27731072 intergenic not near genes chr3R_8_27725001 chr3R_27725001 RAL-371_125b 2464 chr3R 27752718 27752791 chr3R 27753153 27753196 11 428 1.5 5.5 3.5 2.4 478 chr3R 27752718 intergenic not near genes chr3R 27752957 intergenic not near genes chr3R 27753196 intergenic not near genes chr3R_11_27750001 chr3R_27750001 RAL-371_125b 2465 chr3R 27779256 27779285 chr3R 27779361 27779388 5 119 5.0 6.5 5.8 0.7 132 chr3R 27779256 exon CG34353 - chr3R 27779322 intron CG34353 - chr3R 27779388 intron CG34353 - chr3R_5_27775001 chr3R_27775001 RAL-371_125b 2466 chr3R 27789042 27789097 chr3R 27789163 27789223 5 123 4.0 4.5 4.2 1.0 181 chr3R 27789042 exon CG34353 - chr3R 27789132 intron CG34353 - chr3R 27789223 intron CG34353 - chr3R_5_27785001 chr3R_27785001 RAL-371_125b 2467 chr3R 27799890 27799957 chr3R 27800022 27800089 15 132 2.0 1.0 1.5 6.0 199 chr3R 27799890 intron CG34353 - chr3R 27799990 intron CG34353 - chr3R 27800089 intron CG34353 - chr3R_15_27795001 chr3R_27795001 RAL-371_125b 2468 chr3R 27856719 27856782 chr3R 27858252 27858315 hopper2 6 1533 3.5 5.5 4.5 1.1 1596 chr3R 27856719 intron CG34353 - chr3R 27857517 intron CG34353 - chr3R 27858315 intron CG34353 - chr3R_6_27855001 chr3R_27855001 RAL-371_125b 2469 chr3R 27862914 27862985 chr3R 27868269 27868351 Transpac 11 5356 0.5 0.0 0.2 9.2 5437 chr3R 27862914 intron CG34353 - chr3R 27865632 intron CG34353 - chr3R 27868351 intron CG34353 - chr3R_11_27865001 chr3R_27865001 RAL-371_125b 2470 chr3R 27875662 27875733 chr3R 27882767 27882772 297 16 7100 3.0 3.0 3.0 4.0 7110 chr3R 27875662 intron CG34353 - chr3R 27879217 intron CG34353 - chr3R 27882772 intron CG34353 - chr3R_16_27875001 chr3R_27875001 RAL-371_125b 2471 chr3R 28017920 28017978 chr3R 28018061 28018119 4 141 3.0 7.5 5.2 0.6 199 chr3R 28017920 intergenic not near genes chr3R 28018020 intergenic not near genes chr3R 28018119 intergenic not near genes chr3R_4_28015001 chr3R_28015001 RAL-371_125b 2472 chr3R 28054421 28054470 chr3R 28054531 28054596 13 120 3.0 3.5 3.2 3.1 175 chr3R 28054421 intron CG34362 + chr3R 28054508 intron CG34362 + chr3R 28054596 intron CG34362 + chr3R_13_28050001 chr3R_28050001 RAL-371_125b 2473 chr3R 28126682 28126753 chr3R 28126818 28126888 8 130 7.0 4.5 5.8 1.2 206 chr3R 28126682 intergenic not near genes chr3R 28126785 intergenic not near genes chr3R 28126888 intergenic not near genes chr3R_8_28125001 chr3R_28125001 RAL-371_125b 2474 chr3R 28152309 28152358 chr3R 28152436 28152485 8 126 3.5 3.5 3.5 1.8 176 chr3R 28152309 intron CG34354 + chr3R 28152397 intron CG34354 + chr3R 28152485 intron CG34354 + chr3R_8_28150001 chr3R_28150001 RAL-371_125b 2475 chr3R 28173655 28173693 chr3R 28181130 28181173 mdg1 7 7479 3.0 3.5 3.2 1.7 7518 chr3R 28173655 intron CG34354 + chr3R 28177414 intron CG34354 + chr3R 28181173 intron CG34354 + chr3R_7_28175001 chr3R_28175001 RAL-371_125b 2476 chr3R 28253301 28253362 chr3R 28255861 28255898 jockey 17 2554 5.0 3.5 4.2 3.3 2597 chr3R 28253301 intergenic not near genes chr3R 28254600 intergenic not near genes chr3R 28255898 intergenic not near genes chr3R_17_28250001 chr3R_28250001 RAL-371_125b 2477 chr3R 28262181 28262219 chr3R 28262310 28262348 4 129 3.0 3.0 3.0 1.0 167 chr3R 28262181 intergenic not near genes chr3R 28262264 intergenic CG43125 - chr3R 28262348 intergenic CG43125 - chr3R_4_28260001 chr3R_28260001 RAL-371_125b 2478 chr3R 28301743 28301789 chr3R 28301875 28301921 11 132 7.0 0.5 3.8 2.3 178 chr3R 28301743 intergenic not near genes chr3R 28301832 intergenic not near genes chr3R 28301921 intergenic not near genes chr3R_11_28300001 chr3R_28300001 RAL-371_125b 2479 chr3R 28302075 28302096 chr3R 28302558 28302588 jockey 9 491 3.5 6.5 5.0 1.5 513 chr3R 28302075 intergenic not near genes chr3R 28302332 intergenic not near genes chr3R 28302588 intergenic not near genes chr3R_9_28300001 chr3R_28300001 RAL-371_125b 2480 chr3R 28344051 28344058 chr3R 28344178 28344209 4 145 3.5 8.0 5.8 0.6 158 chr3R 28344051 exon Moca-cyp + chr3R 28344130 exon Moca-cyp + chr3R 28344209 exon Moca-cyp + chr3R_4_28340001 chr3R_28340001 RAL-371_125b 2481 chr3R 28352467 28352536 chr3R 28352857 28352926 12 388 3.5 1.0 2.2 3.8 459 chr3R 28352467 exon Or98b + chr3R 28352696 exon Or98b + chr3R 28352926 exon Or98b + chr3R_12_28350001 chr3R_28350001 RAL-371_125b 2482 chr3R 28368953 28368974 chr3R 28369087 28369108 5 134 2.0 5.0 3.5 1.1 155 chr3R 28368953 intergenic not near genes chr3R 28369030 intergenic not near genes chr3R 28369108 intergenic not near genes chr3R_5_28365001 chr3R_28365001 RAL-371_125b 2483 chr3R 28368979 28369010 chr3R 28369083 28369144 10 131 0.5 4.0 2.2 3.1 165 chr3R 28368979 intergenic not near genes chr3R 28369062 intergenic not near genes chr3R 28369144 intergenic not near genes chr3R_10_28365001 chr3R_28365001 RAL-371_125b 2484 chr3R 28390085 28390133 chr3R 28390190 28390261 7 116 2.0 3.0 2.5 2.0 176 chr3R 28390085 intergenic not near genes chr3R 28390173 intergenic not near genes chr3R 28390261 intergenic not near genes chr3R_7_28390001 chr3R_28390001 RAL-371_125b 2485 chr3R 28393670 28393724 chr3R 28393820 28393874 9 150 4.0 5.0 4.5 1.6 204 chr3R 28393670 intergenic not near genes chr3R 28393772 intergenic not near genes chr3R 28393874 intergenic not near genes chr3R_9_28390001 chr3R_28390001 RAL-371_125b 2486 chr3R 28424126 28424190 chr3R 28424265 28424329 15 139 4.0 2.5 3.2 3.6 203 chr3R 28424126 intron beat-VI + chr3R 28424228 intron beat-VI + chr3R 28424329 intron beat-VI + chr3R_15_28420001 chr3R_28420001 RAL-371_125b 2487 chr3R 28478381 28478425 chr3R 28478512 28478530 4 122 4.0 5.5 4.8 0.7 149 chr3R 28478381 intergenic not near genes chr3R 28478456 intergenic not near genes chr3R 28478530 intergenic not near genes chr3R_4_28475001 chr3R_28475001 RAL-371_125b 2488 chr3R 28479101 28479163 chr3R 28479234 28479296 10 133 2.0 1.5 1.8 3.6 195 chr3R 28479101 intergenic not near genes chr3R 28479198 intergenic not near genes chr3R 28479296 intergenic not near genes chr3R_10_28475001 chr3R_28475001 RAL-371_125b 2489 chr3R 28480307 28480330 chr3R 28480438 28480461 4 131 1.5 3.5 2.5 1.1 154 chr3R 28480307 intergenic not near genes chr3R 28480384 intergenic not near genes chr3R 28480461 intergenic not near genes chr3R_4_28480001 chr3R_28480001 RAL-371_125b 2490 chr3R 28484356 28484373 chr3R 28486223 28486240 10 1867 41.5 87.0 64.2 0.2 1884 chr3R 28484356 intergenic CG1894 + chr3R 28485298 exon CG1894 + chr3R 28486240 intergenic CG1894 + chr3R_10_28485001 chr3R_28485001 RAL-371_125b 2491 chr3R 28484354 28484425 chr3R 28486241 28486292 43 1868 60.5 79.5 70.0 0.6 1938 chr3R 28484354 intergenic CG1894 + chr3R 28485323 exon CG1894 + chr3R 28486292 intergenic CG1894 + chr3R_43_28485001 chr3R_28485001 RAL-371_125b 2492 chr3R 28575882 28575910 chr3R 28576035 28576068 7 166 0.5 8.5 4.5 1.3 186 chr3R 28575882 intergenic not near genes chr3R 28575975 intergenic not near genes chr3R 28576068 intergenic not near genes chr3R_7_28575001 chr3R_28575001 RAL-371_125b 2493 chr3R 28590026 28590083 chr3R 28590153 28590210 12 127 4.5 4.5 4.5 2.2 184 chr3R 28590026 5` UTR MRE23 + chr3R 28590118 5` UTR MRE23 + chr3R 28590210 5` UTR MRE23 + chr3R_12_28590001 chr3R_28590001 RAL-371_125b 2494 chr3R 28597451 28597517 chr3R 28597573 28597644 15 124 5.5 9.0 7.2 1.8 193 chr3R 28597451 intergenic not near genes chr3R 28597548 intergenic not near genes chr3R 28597644 intergenic Noa36 - chr3R_15_28595001 chr3R_28595001 RAL-371_125b 2495 chr3R 28711689 28711758 chr3R 28711828 28711897 9 137 5.0 1.5 3.2 2.1 208 chr3R 28711689 intron htt + chr3R 28711793 intron htt + chr3R 28711897 intron htt + chr3R_9_28710001 chr3R_28710001 RAL-371_125b 2496 chr3R 28712836 28712914 chr3R 28712975 28713057 10 140 3.0 0.0 1.5 4.0 221 chr3R 28712836 intron htt + chr3R 28712946 intron htt + chr3R 28713057 intron htt + chr3R_10_28710001 chr3R_28710001 RAL-371_125b 2497 chr3R 28736170 28736226 chr3R 28736289 28736325 8 125 2.5 1.0 1.8 2.9 155 chr3R 28736170 intergenic not near genes chr3R 28736248 intergenic not near genes chr3R 28736325 intergenic not near genes chr3R_8_28735001 chr3R_28735001 RAL-371_125b 2498 chr3R 28749477 28749530 chr3R 28749614 28749672 11 132 4.5 3.5 4.0 2.2 195 chr3R 28749477 exon CG10000 - chr3R 28749574 exon CG10000 - chr3R 28749672 intron CG10000 - chr3R_11_28745001 chr3R_28745001 RAL-371_125b 2499 chr3R 28758276 28758297 chr3R 28771333 28771354 Stalker4 4 13057 3.0 2.0 2.5 1.1 13078 chr3R 28758276 intergenic aqrs - chr3R 28764815 intergenic not near genes chr3R 28771354 intergenic not near genes chr3R_4_28760001 chr3R_28760001 RAL-371_125b 2500 chr3R 28792829 28792864 chr3R 28797974 28797999 jockey 4 5140 2.5 3.5 3.0 1.0 5170 chr3R 28792829 intergenic not near genes chr3R 28795414 intergenic not near genes chr3R 28797999 intergenic not near genes chr3R_4_28795001 chr3R_28795001 RAL-371_125b 2501 chr3R 21907534 21907536 chr3R 28831801 28831801 10 6924266 13.5 16.5 15.0 0.6 6924267 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831801 intron WASp - chr3R_10_25365001 chr3R_25365001 RAL-371_125b 2502 chr3R 21907534 21907536 chr3R 28831802 28831802 13 6924267 13.5 16.5 15.0 0.8 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_13_25365001 chr3R_25365001 RAL-371_125b 2503 chr3R 29053704 29053758 chr3R 29054262 29054318 12 559 2.5 1.0 1.8 4.3 614 chr3R 29053704 exon CG11842 + chr3R 29054011 intergenic CG11842 +,CG11843 + chr3R 29054318 intergenic CG11843 +,CG11842 + chr3R_12_29050001 chr3R_29050001 RAL-371_125b 2504 chr3R 29059329 29059391 chr3R 29059474 29059526 11 142 5.0 7.0 6.0 1.6 197 chr3R 29059329 3` UTR Cul5 - chr3R 29059428 3` UTR Cul5 - chr3R 29059526 3` UTR Cul5 - chr3R_11_29055001 chr3R_29055001 RAL-371_125b 2505 chr3R 29070009 29070072 chr3R 29070140 29070203 11 131 4.5 4.0 4.2 2.1 194 chr3R 29070009 intron CG11873 + chr3R 29070106 intron CG11873 + chr3R 29070203 intron CG11873 + chr3R_11_29070001 chr3R_29070001 RAL-371_125b 2506 chr3R 29091407 29091428 chr3R 29091535 29091556 5 130 6.0 4.0 5.0 0.8 149 chr3R 29091407 intron CG11873 + chr3R 29091482 intron CG11873 + chr3R 29091556 intron CG11873 + chr3R_5_29090001 chr3R_29090001 RAL-371_125b 2507 chr3R 29141526 29141549 chr3R 29141655 29141678 6 129 0.0 6.5 3.2 1.4 152 chr3R 29141526 intron CG14516 + chr3R 29141602 intron CG14516 + chr3R 29141678 intron CG14516 + chr3R_6_29140001 chr3R_29140001 RAL-371_125b 2508 chr3R 29237240 29237264 chr3R 29239291 29239335 9 2065 19.5 3.0 11.2 0.7 2095 chr3R 29237240 exon CG11951 - chr3R 29238288 intron CG11951 - chr3R 29239335 exon CG31427 - chr3R_9_29235001 chr3R_29235001 RAL-371_125b 2509 chr3R 29239213 29239241 chr3R 29245538 29245582 7 6335 2.0 22.0 12.0 0.5 6369 chr3R 29239213 exon CG31427 - chr3R 29242398 exon CG31445 - chr3R 29245582 exon SP1029 - chr3R_7_29240001 chr3R_29240001 RAL-371_125b 2510 chr3R 29282761 29282811 chr3R 29282897 29282911 8 130 6.5 10.5 8.5 0.8 150 chr3R 29282761 intergenic not near genes chr3R 29282836 intergenic not near genes chr3R 29282911 intergenic not near genes chr3R_8_29280001 chr3R_29280001 RAL-371_125b 2511 chr3R 29319778 29319848 chr3R 29320147 29320217 jockey 9 368 1.5 3.5 2.5 2.6 439 chr3R 29319778 intergenic Cnx99A - chr3R 29319998 intergenic Cnx99A - chr3R 29320217 intergenic not near genes chr3R_9_29315001 chr3R_29315001 RAL-371_125b 2512 chr3R 29356058 29356076 chr3R 29356189 29356207 4 131 0.0 5.5 2.8 1.1 149 chr3R 29356058 intergenic CR45547 - chr3R 29356132 intergenic CR45547 - chr3R 29356207 3` UTR CR45547 - chr3R_4_29355001 chr3R_29355001 RAL-371_125b 2513 chr3R 29372674 29372723 chr3R 29372800 29372849 5 126 1.5 3.5 2.5 1.4 175 chr3R 29372674 intergenic not near genes chr3R 29372762 intergenic not near genes chr3R 29372849 intergenic not near genes chr3R_5_29370001 chr3R_29370001 RAL-371_125b 2514 chr3R 29449321 29449383 chr3R 29449449 29449511 10 128 2.0 4.5 3.2 2.4 190 chr3R 29449321 intron Ptp99A + chr3R 29449416 intron Ptp99A + chr3R 29449511 intron Ptp99A + chr3R_10_29445001 chr3R_29445001 RAL-371_125b 2515 chr3R 29453688 29453779 chr3R 29453831 29453905 11 131 0.5 2.0 1.2 5.0 217 chr3R 29453688 intron Ptp99A + chr3R 29453796 intron Ptp99A + chr3R 29453905 intron Ptp99A + chr3R_11_29450001 chr3R_29450001 RAL-371_125b 2516 chr3R 29505849 29505918 chr3R 29505976 29506045 13 127 2.5 4.5 3.5 2.9 196 chr3R 29505849 intergenic not near genes chr3R 29505947 intergenic not near genes chr3R 29506045 intergenic not near genes chr3R_13_29505001 chr3R_29505001 RAL-371_125b 2517 chr3R 29516534 29516595 chr3R 29516668 29516729 9 128 2.5 4.0 3.2 2.1 195 chr3R 29516534 intergenic CG2014 + chr3R 29516632 intergenic CG2014 + chr3R 29516729 intergenic CG2014 + chr3R_9_29515001 chr3R_29515001 RAL-371_125b 2518 chr3R 29575785 29575793 chr3R 29575918 29575926 5 133 5.0 0.0 2.5 1.4 141 chr3R 29575785 intergenic not near genes chr3R 29575856 intergenic not near genes chr3R 29575926 intergenic not near genes chr3R_5_29575001 chr3R_29575001 RAL-371_125b 2519 chr3R 29576750 29577006 chr3R 29576894 29577135 11 133 4.0 4.0 4.0 2.2 385 chr3R 29576750 intergenic not near genes chr3R 29576942 intergenic not near genes chr3R 29577135 intergenic not near genes chr3R_11_29575001 chr3R_29575001 RAL-371_125b 2520 chr3R 29609121 29609180 chr3R 29609260 29609319 13 139 4.0 0.5 2.2 4.1 198 chr3R 29609121 intron alph + chr3R 29609220 intron alph + chr3R 29609319 intron alph + chr3R_13_29605001 chr3R_29605001 RAL-371_125b 2521 chr3R 29708531 29708590 chr3R 29708659 29708663 7 116 4.5 2.5 3.5 1.6 132 chr3R 29708531 intergenic not near genes chr3R 29708597 intergenic not near genes chr3R 29708663 intergenic not near genes chr3R_7_29705001 chr3R_29705001 RAL-371_125b 2522 chr3R 29719376 29719435 chr3R 29719504 29719563 13 128 4.0 3.5 3.8 2.7 187 chr3R 29719376 intron CG15506 + chr3R 29719470 intron CG15506 + chr3R 29719563 intron CG15506 + chr3R_13_29715001 chr3R_29715001 RAL-371_125b 2523 chr3R 29731927 29731969 chr3R 29732059 29732071 11 124 8.0 2.5 5.2 1.8 144 chr3R 29731927 exon Kul + chr3R 29731999 exon Kul + chr3R 29732071 exon Kul + chr3R_11_29730001 chr3R_29730001 RAL-371_125b 2524 chr3R 29738241 29738268 chr3R 29739758 29739785 hobo 4 1512 4.5 5.5 5.0 0.7 1544 chr3R 29738241 intergenic CG1969 +,CG7598 + chr3R 29739013 intron CG1969 + chr3R 29739785 5` UTR CG1969 + chr3R_4_29735001 chr3R_29735001 RAL-371_125b 2525 chr3R 29754934 29754987 chr3R 29755062 29755114 7 128 2.0 2.5 2.2 2.2 180 chr3R 29754934 intergenic CR44953 -,yata + chr3R 29755024 intergenic CR44953 -,yata + chr3R 29755114 intergenic CR44953 - chr3R_7_29755001 chr3R_29755001 RAL-371_125b 2526 chr3R 29758898 29758970 chr3R 29759026 29759067 13 125 3.5 4.0 3.8 2.7 169 chr3R 29758898 3` UTR CR44953 - chr3R 29758982 3` UTR CR44953 - chr3R 29759067 intergenic CR44953 - chr3R_13_29755001 chr3R_29755001 RAL-371_125b 2527 chr3R 29760321 29760383 chr3R 29761572 29761634 pogo 11 1250 3.0 1.5 2.2 3.4 1313 chr3R 29760321 intergenic not near genes chr3R 29760978 intergenic not near genes chr3R 29761634 intergenic not near genes chr3R_11_29760001 chr3R_29760001 RAL-371_125b 2528 chr3R 29773836 29773884 chr3R 29773977 29774003 7 138 6.5 0.0 3.2 1.7 167 chr3R 29773836 intron kay + chr3R 29773920 intron kay + chr3R 29774003 intron kay + chr3R_7_29770001 chr3R_29770001 RAL-371_125b 2529 chr3R 29829205 29829224 chr3R 29829338 29829346 4 130 4.5 1.0 2.8 1.1 141 chr3R 29829205 intron Atg16 - chr3R 29829276 intron Atg16 - chr3R 29829346 intron Atg16 - chr3R_4_29825001 chr3R_29825001 RAL-371_125b 2530 chr3R 29829243 29829277 chr3R 29829331 29829334 5 90 1.0 0.0 0.5 3.3 91 chr3R 29829243 intron Atg16 - chr3R 29829288 intron Atg16 - chr3R 29829334 intron Atg16 - chr3R_5_29825001 chr3R_29825001 RAL-371_125b 2531 chr3R 29880543 29880608 chr3R 29880678 29880712 18 133 3.0 2.0 2.5 5.1 169 chr3R 29880543 intron CG31038 + chr3R 29880628 intron CG31038 + chr3R 29880712 intron CG31038 + chr3R_18_29880001 chr3R_29880001 RAL-371_125b 2532 chr3R 29881979 29882034 chr3R 29891186 29891241 roo 16 9205 10.5 4.5 7.5 1.9 9262 chr3R 29881979 intron CG31038 + chr3R 29886610 intron CG31038 + chr3R 29891241 intron CG31038 + chr3R_16_29885001 chr3R_29885001 RAL-371_125b 2533 chr3R 29950524 29950588 chr3R 29950651 29950715 13 121 3.5 3.5 3.5 2.9 191 chr3R 29950524 intergenic TkR99D - chr3R 29950620 intergenic TkR99D - chr3R 29950715 intergenic TkR99D - chr3R_13_29950001 chr3R_29950001 RAL-371_125b 2534 chr3R 29963448 29963494 chr3R 29963595 29963646 12 146 2.5 0.0 1.2 5.5 198 chr3R 29963448 intron TkR99D - chr3R 29963547 intron TkR99D - chr3R 29963646 intron TkR99D - chr3R_12_29960001 chr3R_29960001 RAL-371_125b 2535 chr3R 30032119 30032130 chr3R 30032248 30032259 5 128 5.0 4.5 4.8 0.9 140 chr3R 30032119 intron Axn + chr3R 30032189 intron Axn + chr3R 30032259 intron Axn + chr3R_5_30030001 chr3R_30030001 RAL-371_125b 2536 chr3R 30084848 30084872 chr3R 30086316 30086389 hobo 6 1509 4.0 3.5 3.8 1.2 1541 chr3R 30084848 intron sima + chr3R 30085618 intron sima + chr3R 30086389 intron sima + chr3R_6_30085001 chr3R_30085001 RAL-371_125b 2537 chr3R 30182713 30182747 chr3R 30182902 30182926 4 186 5.5 1.5 3.5 0.9 213 chr3R 30182713 intergenic not near genes chr3R 30182820 intergenic not near genes chr3R 30182926 intergenic not near genes chr3R_4_30180001 chr3R_30180001 RAL-371_125b 2538 chr3R 30210518 30210673 chr3R 30210664 30210803 4 142 0.0 0.0 0.0 4.0 285 chr3R 30210518 intergenic Anp +,CecA1 + chr3R 30210660 intergenic CecA1 +,Anp + chr3R 30210803 intergenic CecA1 +,Anp + chr3R_4_30210001 chr3R_30210001 RAL-371_125b 2539 chr3R 30212017 30212062 chr3R 30212461 30212461 6 442 2.0 0.0 1.0 3.0 444 chr3R 30212017 intergenic CecA2 + chr3R 30212239 exon CecA2 + chr3R 30212461 exon CecA2 + chr3R_6_30210001 chr3R_30210001 RAL-371_125b 2540 chr3R 30238721 30238786 chr3R 30239935 30240000 1360 8 1214 5.0 3.5 4.2 1.5 1279 chr3R 30238721 intergenic not near genes chr3R 30239360 intergenic not near genes chr3R 30240000 intergenic not near genes chr3R_8_30235001 chr3R_30235001 RAL-371_125b 2541 chr3R 30268373 30268447 chr3R 30268494 30268527 13 122 3.5 2.0 2.8 3.4 154 chr3R 30268373 intergenic not near genes chr3R 30268450 intergenic not near genes chr3R 30268527 intergenic not near genes chr3R_13_30265001 chr3R_30265001 RAL-371_125b 2542 chr3R 30287762 30287775 chr3R 30287895 30287908 4 133 6.0 2.0 4.0 0.8 146 chr3R 30287762 intron hdc + chr3R 30287835 intron hdc + chr3R 30287908 intron hdc + chr3R_4_30285001 chr3R_30285001 RAL-371_125b 2543 chr3R 30317275 30317330 chr3R 30324916 30324972 roo 6 7638 3.0 0.0 1.5 2.4 7697 chr3R 30317275 intron hdc + chr3R 30321124 intron hdc + chr3R 30324972 intron hdc + chr3R_6_30320001 chr3R_30320001 RAL-371_125b 2544 chr3R 30375505 30375550 chr3R 30383180 30383225 412 4 7675 4.5 4.5 4.5 0.7 7720 chr3R 30375505 intergenic not near genes chr3R 30379365 intergenic not near genes chr3R 30383225 intergenic not near genes chr3R_4_30375001 chr3R_30375001 RAL-371_125b 2545 chr3R 30396170 30396217 chr3R 30404486 30404533 roo 10 8316 3.0 4.0 3.5 2.2 8363 chr3R 30396170 intergenic not near genes chr3R 30400352 intergenic not near genes chr3R 30404533 5` UTR CR45570 + chr3R_10_30400001 chr3R_30400001 RAL-371_125b 2546 chr3R 30445471 30445530 chr3R 30445613 30445672 10 142 3.5 3.0 3.2 2.4 201 chr3R 30445471 intergenic aralar1 -,Osi23 - chr3R 30445572 intergenic aralar1 - chr3R 30445672 3` UTR aralar1 - chr3R_10_30445001 chr3R_30445001 RAL-371_125b 2547 chr3R 30480441 30480492 chr3R 30482959 30483010 jockey 8 2518 2.5 7.0 4.8 1.4 2569 chr3R 30480441 intron PH4alphaEFB + chr3R 30481726 intron PH4alphaEFB + chr3R 30483010 intron PH4alphaEFB + chr3R_8_30480001 chr3R_30480001 RAL-371_125b 2548 chr3R 30495298 30495341 chr3R 30495407 30495473 7 125 2.0 1.0 1.5 2.8 175 chr3R 30495298 intron PH4alphaMP - chr3R 30495386 intron PH4alphaMP - chr3R 30495473 intron PH4alphaMP - chr3R_7_30495001 chr3R_30495001 RAL-371_125b 2549 chr3R 30539784 30539834 chr3R 30539911 30539961 7 127 1.0 2.0 1.5 2.8 177 chr3R 30539784 intron tmod + chr3R 30539872 intron tmod + chr3R 30539961 intron tmod + chr3R_7_30535001 chr3R_30535001 RAL-371_125b 2550 chr3R 30600758 30600772 chr3R 30600904 30600918 7 145 4.5 4.0 4.2 1.3 160 chr3R 30600758 intron CG2246 - chr3R 30600838 intron CG2246 - chr3R 30600918 intron CG2246 - chr3R_7_30600001 chr3R_30600001 RAL-371_125b 2551 chr3R 30600775 30600808 chr3R 30600901 30600954 11 144 3.5 4.0 3.8 2.3 179 chr3R 30600775 intron CG2246 - chr3R 30600864 intron CG2246 - chr3R 30600954 intron CG2246 - chr3R_11_30600001 chr3R_30600001 RAL-371_125b 2552 chr3R 30627562 30627628 chr3R 30627692 30627755 7 127 4.5 6.5 5.5 1.1 193 chr3R 30627562 3` UTR CG2267 - chr3R 30627658 exon CG2267 - chr3R 30627755 exon CG2267 - chr3R_7_30625001 chr3R_30625001 RAL-371_125b 2553 chr3R 30663519 30663569 chr3R 30663655 30663705 7 136 4.0 7.5 5.8 1.0 186 chr3R 30663519 intergenic not near genes chr3R 30663612 intergenic not near genes chr3R 30663705 intergenic not near genes chr3R_7_30660001 chr3R_30660001 RAL-371_125b 2554 chr3R 30679486 30679551 chr3R 30687005 30687070 blood 11 7515 2.5 3.0 2.8 2.9 7584 chr3R 30679486 intergenic not near genes chr3R 30683278 intergenic not near genes chr3R 30687070 intergenic not near genes chr3R_11_30680001 chr3R_30680001 RAL-371_125b 2555 chr3R 30700830 30700855 chr3R 30701003 30701028 4 173 2.0 0.0 1.0 2.0 198 chr3R 30700830 intergenic not near genes chr3R 30700929 intergenic not near genes chr3R 30701028 intergenic not near genes chr3R_4_30700001 chr3R_30700001 RAL-371_125b 2556 chr3R 30803805 30803842 chr3R 30803996 30804033 7 191 4.5 3.5 4.0 1.4 228 chr3R 30803805 intron wts - chr3R 30803919 intron wts - chr3R 30804033 intron wts - chr3R_7_30800001 chr3R_30800001 RAL-371_125b 2557 chr3R 30818765 30818834 chr3R 30820380 30820444 1360 9 1613 1.0 2.0 1.5 3.6 1679 chr3R 30818765 intron cindr + chr3R 30819604 intron cindr + chr3R 30820444 intron cindr + chr3R_9_30815001 chr3R_30815001 RAL-371_125b 2558 chr3R 30835616 30835690 chr3R 30835736 30835777 5 115 4.0 2.5 3.2 1.2 161 chr3R 30835616 intron CG15544 + chr3R 30835696 intron CG15544 + chr3R 30835777 intron CG15544 + chr3R_5_30835001 chr3R_30835001 RAL-371_125b 2559 chr3R 30843826 30843855 chr3R 30843986 30844015 5 160 4.0 2.0 3.0 1.2 189 chr3R 30843826 intergenic not near genes chr3R 30843920 intergenic not near genes chr3R 30844015 intergenic not near genes chr3R_5_30840001 chr3R_30840001 RAL-371_125b 2560 chr3R 30859355 30859418 chr3R 30859483 30859546 12 128 3.5 1.5 2.5 3.4 191 chr3R 30859355 intergenic not near genes chr3R 30859450 intergenic not near genes chr3R 30859546 intergenic not near genes chr3R_12_30855001 chr3R_30855001 RAL-371_125b 2561 chr3R 30914933 30914964 chr3R 30915104 30915127 5 169 1.5 6.5 4.0 1.0 194 chr3R 30914933 intron Ptx1 + chr3R 30915030 intron Ptx1 + chr3R 30915127 intron Ptx1 + chr3R_5_30915001 chr3R_30915001 RAL-371_125b 2562 chr3R 30994094 30994145 chr3R 30994254 30994297 5 157 6.5 0.0 3.2 1.2 203 chr3R 30994094 intron 5-HT7 - chr3R 30994196 intron 5-HT7 - chr3R 30994297 intron 5-HT7 - chr3R_5_30990001 chr3R_30990001 RAL-371_125b 2563 chr3R 31042064 31042139 chr3R 31042201 31042276 13 137 3.5 4.5 4.0 2.6 212 chr3R 31042064 exon CanA1 + chr3R 31042170 intron CanA1 + chr3R 31042276 intron CanA1 + chr3R_13_31040001 chr3R_31040001 RAL-371_125b 2564 chr3R 31070800 31070839 chr3R 31070930 31070968 8 126 5.0 2.0 3.5 1.8 168 chr3R 31070800 intron Sox100B + chr3R 31070884 intron Sox100B + chr3R 31070968 intron Sox100B + chr3R_8_31070001 chr3R_31070001 RAL-371_125b 2565 chr3R 31070845 31070879 chr3R 31070925 31071003 6 92 2.0 2.5 2.2 1.9 158 chr3R 31070845 intron Sox100B + chr3R 31070924 intron Sox100B + chr3R 31071003 intron Sox100B + chr3R_6_31070001 chr3R_31070001 RAL-371_125b 2566 chr3R 31074188 31074235 chr3R 31081836 31081883 springer 5 7647 2.0 5.5 3.8 1.0 7695 chr3R 31074188 intron Sox100B + chr3R 31078036 intron Sox100B + chr3R 31081883 intron Sox100B + chr3R_5_31075001 chr3R_31075001 RAL-371_125b 2567 chr3R 31095847 31095898 chr3R 31095995 31096031 6 146 6.0 5.0 5.5 0.9 184 chr3R 31095847 intron CG11317 - chr3R 31095939 intron CG11317 - chr3R 31096031 intron CG11317 - chr3R_6_31095001 chr3R_31095001 RAL-371_125b 2568 chr3R 31139432 31139488 chr3R 31139566 31139623 7 135 7.0 2.5 4.8 1.2 191 chr3R 31139432 intron Gycbeta100B + chr3R 31139528 intron Gycbeta100B + chr3R 31139623 intron Gycbeta100B + chr3R_7_31135001 chr3R_31135001 RAL-371_125b 2569 chr3R 31152227 31152259 chr3R 31152354 31152386 5 124 3.5 8.5 6.0 0.7 159 chr3R 31152227 intron Gycbeta100B + chr3R 31152306 intron Gycbeta100B + chr3R 31152386 intron Gycbeta100B + chr3R_5_31150001 chr3R_31150001 RAL-371_125b 2570 chr3R 31244537 31244605 chr3R 31244724 31244768 19 190 4.0 4.0 4.0 3.8 231 chr3R 31244537 intron qless - chr3R 31244652 intron qless - chr3R 31244768 intron qless - chr3R_19_31240001 chr3R_31240001 RAL-371_125b 2571 chr3R 31279367 31279399 chr3R 31285571 31285608 diver 5 6227 5.0 3.5 4.2 1.0 6241 chr3R 31279367 intergenic not near genes chr3R 31282488 intergenic not near genes chr3R 31285608 intergenic not near genes chr3R_5_31280001 chr3R_31280001 RAL-371_125b 2572 chr3R 31330385 31330401 chr3R 31335639 31335660 copia 5 5259 3.0 5.5 4.2 1.0 5275 chr3R 31330385 intron CG34347 + chr3R 31333022 intron CG34347 + chr3R 31335660 intron CG34347 + chr3R_5_31330001 chr3R_31330001 RAL-371_125b 2573 chr3R 31435315 31435389 chr3R 31435517 31435591 13 202 2.0 2.0 2.0 4.3 276 chr3R 31435315 intron Gprk2 + chr3R 31435453 intron Gprk2 + chr3R 31435591 intron Gprk2 + chr3R_13_31435001 chr3R_31435001 RAL-371_125b 2574 chr3R 31450776 31450809 chr3R 31450925 31450932 4 134 23.0 23.0 23.0 0.2 156 chr3R 31450776 intron Gprk2 + chr3R 31450854 intron Gprk2 + chr3R 31450932 intron Gprk2 + chr3R_4_31450001 chr3R_31450001 RAL-371_125b 2575 chr3R 31453171 31453241 chr3R 31453299 31453369 17 128 3.0 4.5 3.8 3.5 198 chr3R 31453171 intron Gprk2 + chr3R 31453270 intron Gprk2 + chr3R 31453369 exon Gprk2 + chr3R_17_31450001 chr3R_31450001 RAL-371_125b 2576 chr3R 31472161 31472206 chr3R 31472267 31472302 9 107 5.5 5.0 5.2 1.5 141 chr3R 31472161 intergenic not near genes chr3R 31472232 intergenic not near genes chr3R 31472302 intergenic not near genes chr3R_9_31470001 chr3R_31470001 RAL-371_125b 2577 chr3R 31691490 31691544 chr3R 31696305 31696360 Doc 11 4815 5.0 5.5 5.2 1.8 4870 chr3R 31691490 intergenic not near genes chr3R 31693925 intergenic not near genes chr3R 31696360 intergenic not near genes chr3R_11_31690001 chr3R_31690001 RAL-371_125b 2578 chr3R 31814447 31814499 chr3R 31814586 31814633 12 138 5.5 5.0 5.2 1.9 186 chr3R 31814447 intron RhoGAP100F + chr3R 31814540 intron RhoGAP100F + chr3R 31814633 intron RhoGAP100F + chr3R_12_31810001 chr3R_31810001 RAL-371_125b 2579 chr3R 31820518 31820565 chr3R 31820646 31820663 11 121 5.5 6.0 5.8 1.6 145 chr3R 31820518 intron RhoGAP100F + chr3R 31820590 intron RhoGAP100F + chr3R 31820663 intron RhoGAP100F + chr3R_11_31820001 chr3R_31820001 RAL-371_125b 2580 chr3R 31858126 31858150 chr3R 31858276 31858300 6 150 4.0 1.5 2.8 1.6 174 chr3R 31858126 intron heph - chr3R 31858213 intron heph - chr3R 31858300 intron heph - chr3R_6_31855001 chr3R_31855001 RAL-371_125b 2581 chr3R 31865327 31865406 chr3R 31865462 31865535 11 131 2.0 1.5 1.8 3.9 208 chr3R 31865327 intron heph - chr3R 31865431 intron heph - chr3R 31865535 intron heph - chr3R_11_31865001 chr3R_31865001 RAL-371_125b 2582 chr3R 31876170 31876194 chr3R 31876262 31876317 11 114 3.5 1.5 2.5 3.1 147 chr3R 31876170 intron heph - chr3R 31876244 intron heph - chr3R 31876317 intron heph - chr3R_11_31875001 chr3R_31875001 RAL-371_125b 2583 chr3R 31961294 31961319 chr3R 31961427 31961452 7 132 9.5 2.0 5.8 1.0 158 chr3R 31961294 intron heph - chr3R 31961373 intron heph - chr3R 31961452 intron heph - chr3R_7_31960001 chr3R_31960001 RAL-371_125b 2584 chr3R 31961323 31961361 chr3R 31961426 31961494 14 123 4.5 2.0 3.2 3.3 171 chr3R 31961323 intron heph - chr3R 31961408 intron heph - chr3R 31961494 intron heph - chr3R_14_31960001 chr3R_31960001 RAL-371_125b 2585 chr3R 31976541 31976564 chr3R 31976866 31976895 9 330 0.0 4.0 2.0 3.0 354 chr3R 31976541 intron heph - chr3R 31976718 intron heph - chr3R 31976895 intron heph - chr3R_9_31975001 chr3R_31975001 RAL-371_125b 2586 chr3R 31997948 31998016 chr3R 32005468 32005536 blood 14 7517 2.0 1.0 1.5 5.6 7588 chr3R 31997948 intron heph - chr3R 32001742 intron heph - chr3R 32005536 intron heph - chr3R_14_32000001 chr3R_32000001 RAL-371_125b 2587 chr4 76453 76499 chr4 81946 81992 I-element 7 5492 3.5 4.0 3.8 1.5 5539 chr4 76453 intron pan + chr4 79222 intron pan + chr4 81992 intron pan + chr4_7_75001 chr4_75001 RAL-371_125b 2588 chr4 264939 265001 chr4 265192 265254 10 252 4.0 2.0 3.0 2.5 315 chr4 264939 exon RhoGAP102A + chr4 265096 3` UTR RhoGAP102A + chr4 265254 3` UTR RhoGAP102A + chr4_10_265001 chr4_265001 RAL-371_125b 2589 chr4 319947 320000 chr4 328173 328226 Stalker2 5 8226 3.5 1.5 2.5 1.4 8279 chr4 319947 3` UTR CG32850 + chr4 324086 intron CG32850 + chr4 328226 3` UTR,3` UTR CG32850 +,PMCA - chr4_5_320001 chr4_320001 RAL-371_125b 2590 chr4 336214 336269 chr4 336431 336486 9 216 3.5 4.5 4.0 1.8 272 chr4 336214 intron PMCA - chr4 336350 intron PMCA - chr4 336486 intron PMCA - chr4_9_335001 chr4_335001 RAL-371_125b 2591 chr4 662146 662205 chr4 662841 662900 INE-1 6 694 3.5 2.5 3.0 1.5 754 chr4 662146 intron gw - chr4 662523 intron gw - chr4 662900 5` UTR gw - chr4_6_660001 chr4_660001 RAL-371_125b 2592 chr4 671567 671621 chr4 680200 680254 Tirant 13 8632 4.0 9.0 6.5 1.7 8687 chr4 671567 intron CG11360 + chr4 675910 intron CG11360 + chr4 680254 intron CG11360 + chr4_13_675001 chr4_675001 RAL-371_125b 2593 chr4 852883 852928 chr4 853277 853323 7 408 2.0 7.5 4.8 1.2 440 chr4 852883 intergenic not near genes chr4 853103 intergenic not near genes chr4 853323 intergenic CG11148 - chr4_7_850001 chr4_850001 RAL-371_125b 2594 chrX 295813 295880 chrX 303483 303550 412 15 7669 2.0 5.0 3.5 3.3 7737 chrX 295813 intron CG3777 + chrX 299682 intron CG3777 + chrX 303550 intron CG3777 + chrX_15_295001 chrX_295001 RAL-371_125b 2595 chrX 318432 318491 chrX 323568 323627 flea 13 5135 4.0 2.0 3.0 3.2 5195 chrX 318432 intron,intron CG3777 +,CG32816 - chrX 321030 intron,intron CG3777 +,CG32816 - chrX 323627 intron,intron CG3777 +,CG32816 - chrX_13_320001 chrX_320001 RAL-371_125b 2596 chrX 428378 428445 chrX 434613 434680 3S18 12 6228 1.5 2.5 2.0 4.0 6302 chrX 428378 intron CG32816 - chrX 431529 intron CG32816 - chrX 434680 intron CG32816 - chrX_12_430001 chrX_430001 RAL-371_125b 2597 chrX 551403 551442 chrX 558990 559044 412 4 7603 3.5 4.5 4.0 0.8 7641 chrX 551403 intron Appl + chrX 555224 intron Appl + chrX 559044 intron Appl + chrX_4_555001 chrX_555001 RAL-371_125b 2598 chrX 667607 667676 chrX 667741 667810 7 132 5.5 0.0 2.8 1.8 203 chrX 667607 intergenic not near genes chrX 667708 intergenic not near genes chrX 667810 intergenic not near genes chrX_7_665001 chrX_665001 RAL-371_125b 2599 chrX 670206 670296 chrX 670348 670363 7 114 0.0 1.5 0.8 3.9 157 chrX 670206 intergenic not near genes chrX 670284 intergenic not near genes chrX 670363 intergenic not near genes chrX_7_670001 chrX_670001 RAL-371_125b 2600 chrX 680787 680866 chrX 680920 680989 8 131 3.0 4.5 3.8 1.7 202 chrX 680787 intergenic not near genes chrX 680888 intergenic not near genes chrX 680989 intergenic not near genes chrX_8_680001 chrX_680001 RAL-371_125b 2601 chrX 684774 684832 chrX 685240 685298 5 466 0.5 3.5 2.0 1.7 524 chrX 684774 intergenic not near genes chrX 685036 intergenic not near genes chrX 685298 intergenic not near genes chrX_5_685001 chrX_685001 RAL-371_125b 2602 chrX 706742 706816 chrX 707164 707230 7 417 0.0 2.5 1.2 3.2 488 chrX 706742 intron sdk + chrX 706986 intron sdk + chrX 707230 intron sdk + chrX_7_705001 chrX_705001 RAL-371_125b 2603 chrX 718300 718353 chrX 718420 718483 5 127 2.0 3.5 2.8 1.3 183 chrX 718300 intron sdk + chrX 718392 intron sdk + chrX 718483 intron sdk + chrX_5_715001 chrX_715001 RAL-371_125b 2604 chrX 757178 757235 chrX 757474 757538 10 298 4.0 2.0 3.0 2.5 360 chrX 757178 intron CG5254 + chrX 757358 intron CG5254 + chrX 757538 intron CG5254 + chrX_10_755001 chrX_755001 RAL-371_125b 2605 chrX 778101 778159 chrX 778241 778289 11 139 3.0 0.0 1.5 4.4 188 chrX 778101 intron fz3 + chrX 778195 intron fz3 + chrX 778289 intron fz3 + chrX_11_775001 chrX_775001 RAL-371_125b 2606 chrX 806740 806806 chrX 806886 806940 11 145 1.5 5.0 3.2 2.6 200 chrX 806740 exon Sec22 + chrX 806840 intron Sec22 + chrX 806940 intron Sec22 + chrX_11_805001 chrX_805001 RAL-371_125b 2607 chrX 827563 827626 chrX 835405 835468 roo 15 7841 2.0 5.0 3.5 3.3 7905 chrX 827563 intron CG43867 - chrX 831516 intron CG43867 - chrX 835468 intron CG43867 - chrX_15_830001 chrX_830001 RAL-371_125b 2608 chrX 906661 906705 chrX 908499 908542 S-element 4 1838 6.5 3.0 4.8 0.7 1881 chrX 906661 intron CG43867 - chrX 907602 intron CG43867 - chrX 908542 intron CG43867 - chrX_4_905001 chrX_905001 RAL-371_125b 2609 chrX 1236222 1236270 chrX 1236331 1236392 9 124 5.5 1.5 3.5 2.0 170 chrX 1236222 intron CG3638 - chrX 1236307 intron CG3638 - chrX 1236392 intron CG3638 - chrX_9_1235001 chrX_1235001 RAL-371_125b 2610 chrX 1357744 1357793 chrX 1367964 1368013 Doc 10 10220 4.0 5.5 4.8 1.7 10269 chrX 1357744 intergenic png - chrX 1362878 intergenic not near genes chrX 1368013 intergenic not near genes chrX_10_1360001 chrX_1360001 RAL-371_125b 2611 chrX 1517995 1518054 chrX 1523447 1523506 jockey 8 5452 3.5 2.5 3.0 2.0 5511 chrX 1517995 intergenic inc + chrX 1520750 intergenic not near genes chrX 1523506 intergenic not near genes chrX_8_1520001 chrX_1520001 RAL-371_125b 2612 chrX 1554481 1554543 chrX 1554682 1554705 8 186 15.0 21.0 18.0 0.4 224 chrX 1554481 exon Mur2B - chrX 1554593 intron Mur2B - chrX 1554705 exon Mur2B - chrX_8_1550001 chrX_1550001 RAL-371_125b 2613 chrX 1555347 1555408 chrX 1555492 1555532 12 140 18.0 24.0 21.0 0.5 185 chrX 1555347 exon Mur2B - chrX 1555440 exon Mur2B - chrX 1555532 exon Mur2B - chrX_12_1555001 chrX_1555001 RAL-371_125b 2614 chrX 1758747 1758798 chrX 1758867 1758923 6 118 3.5 3.5 3.5 1.3 176 chrX 1758747 intergenic not near genes chrX 1758835 intergenic not near genes chrX 1758923 intergenic not near genes chrX_6_1755001 chrX_1755001 RAL-371_125b 2615 chrX 1894168 1894230 chrX 1894298 1894349 13 138 3.0 3.5 3.2 3.1 181 chrX 1894168 intron arm - chrX 1894258 intron arm - chrX 1894349 intron arm - chrX_13_1890001 chrX_1890001 RAL-371_125b 2616 chrX 1930496 1930550 chrX 1938116 1938171 opus 7 7621 2.0 2.5 2.2 2.2 7675 chrX 1930496 3` UTR CG11596 + chrX 1934334 intergenic not near genes chrX 1938171 3` UTR CG3857 - chrX_7_1930001 chrX_1930001 RAL-371_125b 2617 chrX 1954857 1954902 chrX 1962828 1962876 Stalker2 8 7975 3.5 2.0 2.8 2.1 8019 chrX 1954857 intron Hr4 + chrX 1958866 intron Hr4 + chrX 1962876 intron Hr4 + chrX_8_1955001 chrX_1955001 RAL-371_125b 2618 chrX 2069335 2069396 chrX 2069485 2069546 11 147 3.5 3.0 3.2 2.6 211 chrX 2069335 intron,exon CG4199 -,CG4194 + chrX 2069440 intron,3` UTR CG4199 -,CG4194 + chrX 2069546 intron,3` UTR CG4199 -,CG4194 + chrX_11_2065001 chrX_2065001 RAL-371_125b 2619 chrX 2126032 2126070 chrX 2126155 2126203 5 131 4.5 2.0 3.2 1.2 171 chrX 2126032 intergenic ph-p - chrX 2126118 intergenic ph-p - chrX 2126203 intergenic ph-p - chrX_5_2125001 chrX_2125001 RAL-371_125b 2620 chrX 2399807 2399837 chrX 2408198 2408239 roo 8 8398 7.5 4.0 5.8 1.2 8432 chrX 2399807 intergenic not near genes chrX 2404023 intergenic not near genes chrX 2408239 intergenic not near genes chrX_8_2400001 chrX_2400001 RAL-371_125b 2621 chrX 2399839 2399856 chrX 2408191 2408259 roo 4 8389 6.0 4.0 5.0 0.7 8420 chrX 2399839 intergenic not near genes chrX 2404049 intergenic not near genes chrX 2408259 intergenic not near genes chrX_4_2400001 chrX_2400001 RAL-371_125b 2622 chrX 2429623 2429661 chrX 2429754 2429792 9 131 0.0 4.0 2.0 3.0 169 chrX 2429623 intergenic not near genes chrX 2429708 intergenic not near genes chrX 2429792 intergenic not near genes chrX_9_2425001 chrX_2425001 RAL-371_125b 2623 chrX 2578768 2578841 chrX 2578910 2578983 17 139 0.0 4.0 2.0 5.7 215 chrX 2578768 intergenic Pdfr +,Vha36-3 - chrX 2578876 intergenic Vha36-3 -,Pdfr + chrX 2578983 intergenic Vha36-3 -,Pdfr + chrX_17_2575001 chrX_2575001 RAL-371_125b 2624 chrX 2635327 2635398 chrX 2635486 2635557 12 159 1.5 3.0 2.2 3.8 230 chrX 2635327 intron sgg + chrX 2635442 intron sgg + chrX 2635557 intron sgg + chrX_12_2635001 chrX_2635001 RAL-371_125b 2625 chrX 2664331 2664401 chrX 2665535 2665603 1360 6 1204 2.0 0.0 1.0 3.0 1272 chrX 2664331 intron sgg + chrX 2664967 intron sgg + chrX 2665603 intron sgg + chrX_6_2660001 chrX_2660001 RAL-371_125b 2626 chrX 2823754 2823774 chrX 2832352 2832372 roo 5 8598 4.0 3.0 3.5 1.1 8618 chrX 2823754 intron kirre + chrX 2828063 intron kirre + chrX 2832372 intron kirre + chrX_5_2825001 chrX_2825001 RAL-371_125b 2627 chrX 2844862 2844923 chrX 2852322 2852383 mdg1 7 7460 1.5 1.5 1.5 2.8 7521 chrX 2844862 intron kirre + chrX 2848622 intron kirre + chrX 2852383 intron kirre + chrX_7_2845001 chrX_2845001 RAL-371_125b 2628 chrX 2888075 2888136 chrX 2888203 2888264 8 127 5.5 4.0 4.8 1.4 189 chrX 2888075 intron kirre + chrX 2888170 intron kirre + chrX 2888264 intron kirre + chrX_8_2885001 chrX_2885001 RAL-371_125b 2629 chrX 3038689 3038752 chrX 3038827 3038884 15 135 4.5 2.0 3.2 3.6 195 chrX 3038689 intron kirre + chrX 3038786 intron kirre + chrX 3038884 intron kirre + chrX_15_3035001 chrX_3035001 RAL-371_125b 2630 chrX 3057984 3058036 chrX 3058275 3058327 pogo 8 291 5.0 1.0 3.0 2.0 343 chrX 3057984 intron kirre + chrX 3058156 intron kirre + chrX 3058327 intron kirre + chrX_8_3055001 chrX_3055001 RAL-371_125b 2631 chrX 3067902 3067964 chrX 3068041 3068078 5 134 1.0 0.0 0.5 3.3 176 chrX 3067902 intron kirre + chrX 3067990 intron kirre + chrX 3068078 intron kirre + chrX_5_3065001 chrX_3065001 RAL-371_125b 2632 chrX 3082547 3082601 chrX 3082674 3082707 6 115 3.0 3.5 3.2 1.4 160 chrX 3082547 intron kirre + chrX 3082627 intron kirre + chrX 3082707 intron kirre + chrX_6_3080001 chrX_3080001 RAL-371_125b 2633 chrX 3352727 3352747 chrX 3352866 3352886 4 139 3.5 6.0 4.8 0.7 159 chrX 3352727 intergenic not near genes chrX 3352806 intergenic not near genes chrX 3352886 intergenic not near genes chrX_4_3350001 chrX_3350001 RAL-371_125b 2634 chrX 3415016 3415037 chrX 3421251 3421272 3S18 8 6235 0.5 2.5 1.5 3.2 6256 chrX 3415016 intron,intron CR44999 +,CG12535 - chrX 3418144 intron,intron CR44999 +,CG12535 - chrX 3421272 intron,intron CR44999 +,CG12535 - chrX_8_3415001 chrX_3415001 RAL-371_125b 2635 chrX 3459954 3460005 chrX 3460081 3460113 5 123 3.5 2.5 3.0 1.2 159 chrX 3459954 intron,intron CR44999 +,CG16782 - chrX 3460034 intron,5` UTR CR44999 +,CG16782 - chrX 3460113 intron,5` UTR CR44999 +,CG16782 - chrX_5_3460001 chrX_3460001 RAL-371_125b 2636 chrX 3472691 3472705 chrX 3472818 3472832 4 127 4.5 7.5 6.0 0.6 141 chrX 3472691 intron,exon CR44999 +,CG12206 - chrX 3472762 intron,exon CR44999 +,CG12206 - chrX 3472832 intron,exon CR44999 +,CG12206 - chrX_4_3470001 chrX_3470001 RAL-371_125b 2637 chrX 3493051 3493124 chrX 3502256 3502297 roo 6 9201 1.5 1.0 1.2 2.7 9246 chrX 3493051 intron,intron CR44999 +,Gas8 - chrX 3497674 intron,intron CR44999 +,Gas8 - chrX 3502297 intron,intron CR44999 +,Gas8 - chrX_6_3495001 chrX_3495001 RAL-371_125b 2638 chrX 3513720 3513781 chrX 3513853 3513914 10 130 4.0 3.0 3.5 2.2 194 chrX 3513720 intron,intron CR44999 +,CG32791 - chrX 3513817 intron,intron CR44999 +,CG32791 - chrX 3513914 intron,intron CR44999 +,CG32791 - chrX_10_3510001 chrX_3510001 RAL-371_125b 2639 chrX 3597511 3597579 chrX 3619729 3619781 roo 11 22213 3.0 3.5 3.2 2.6 22270 chrX 3597511 intron AstA-R1 + chrX 3608646 intron AstA-R1 + chrX 3619781 intron AstA-R1 + chrX_11_3605001 chrX_3605001 RAL-371_125b 2640 chrX 3629815 3629864 chrX 3629948 3629999 6 135 5.0 0.0 2.5 1.7 184 chrX 3629815 intron AstA-R1 + chrX 3629907 intron AstA-R1 + chrX 3629999 intron AstA-R1 + chrX_6_3625001 chrX_3625001 RAL-371_125b 2641 chrX 3630499 3630572 chrX 3630625 3630698 20 126 2.0 5.5 3.8 4.2 199 chrX 3630499 intron AstA-R1 + chrX 3630598 intron AstA-R1 + chrX 3630698 intron AstA-R1 + chrX_20_3630001 chrX_3630001 RAL-371_125b 2642 chrX 3640285 3640312 chrX 3640440 3640467 5 155 1.5 1.5 1.5 2.0 182 chrX 3640285 intron AstA-R1 + chrX 3640376 intron AstA-R1 + chrX 3640467 intron AstA-R1 + chrX_5_3640001 chrX_3640001 RAL-371_125b 2643 chrX 3726729 3726795 chrX 3730176 3730185 NOF 12 3442 1.5 5.5 3.5 2.7 3456 chrX 3726729 intron tlk + chrX 3728457 intron tlk + chrX 3730185 intron tlk + chrX_12_3725001 chrX_3725001 RAL-371_125b 2644 chrX 3842281 3842347 chrX 3842571 3842638 pogo 8 290 3.0 5.0 4.0 1.6 357 chrX 3842281 intron ec + chrX 3842460 intron ec + chrX 3842638 intron ec + chrX_8_3840001 chrX_3840001 RAL-371_125b 2645 chrX 3866063 3866108 chrX 3866184 3866220 9 125 3.0 4.5 3.8 1.9 157 chrX 3866063 intron yin - chrX 3866142 intron yin - chrX 3866220 intron yin - chrX_9_3865001 chrX_3865001 RAL-371_125b 2646 chrX 3950757 3950814 chrX 3950887 3950944 5 130 4.0 2.5 3.2 1.2 187 chrX 3950757 intron Vap-33A + chrX 3950850 intron Vap-33A + chrX 3950944 intron Vap-33A + chrX_5_3950001 chrX_3950001 RAL-371_125b 2647 chrX 3986869 3986882 chrX 3994526 3994565 412 4 7676 2.0 4.5 3.2 1.0 7696 chrX 3986869 intergenic not near genes chrX 3990717 intergenic not near genes chrX 3994565 intergenic not near genes chrX_4_3990001 chrX_3990001 RAL-371_125b 2648 chrX 4055649 4055657 chrX 4055762 4055781 4 126 3.0 5.5 4.2 0.8 132 chrX 4055649 intergenic not near genes chrX 4055715 intergenic not near genes chrX 4055781 intergenic not near genes chrX_4_4055001 chrX_4055001 RAL-371_125b 2649 chrX 4132622 4132686 chrX 4132840 4132904 10 217 2.5 2.5 2.5 2.9 282 chrX 4132622 3` UTR GlcAT-I + chrX 4132763 3` UTR GlcAT-I + chrX 4132904 3` UTR Fas2 - chrX_10_4130001 chrX_4130001 RAL-371_125b 2650 chrX 4157859 4157908 chrX 4164956 4165011 297 9 7102 1.5 3.5 2.5 2.6 7152 chrX 4157859 intron Fas2 - chrX 4161435 intron Fas2 - chrX 4165011 intron Fas2 - chrX_9_4160001 chrX_4160001 RAL-371_125b 2651 chrX 4203477 4203541 chrX 4203607 4203671 7 129 1.5 3.5 2.5 2.0 194 chrX 4203477 5` UTR Fas2 - chrX 4203574 intron Fas2 - chrX 4203671 intron Fas2 - chrX_7_4200001 chrX_4200001 RAL-371_125b 2652 chrX 4216295 4216337 chrX 4216423 4216466 7 127 4.0 4.0 4.0 1.4 171 chrX 4216295 intergenic not near genes chrX 4216380 intergenic CG15571 - chrX 4216466 intergenic CG15571 - chrX_7_4215001 chrX_4215001 RAL-371_125b 2653 chrX 4252917 4252958 chrX 4253055 4253091 7 134 5.0 3.5 4.2 1.3 174 chrX 4252917 intergenic CG15576 - chrX 4253004 intergenic CG15576 - chrX 4253091 intergenic CG15576 - chrX_7_4250001 chrX_4250001 RAL-371_125b 2654 chrX 4324367 4324414 chrX 4324494 4324541 8 126 1.0 3.5 2.2 2.5 174 chrX 4324367 intron norpA + chrX 4324454 intron norpA + chrX 4324541 intron norpA + chrX_8_4320001 chrX_4320001 RAL-371_125b 2655 chrX 4337881 4337947 chrX 4338054 4338120 9 173 3.5 2.5 3.0 2.2 239 chrX 4337881 intron norpA + chrX 4338000 intron norpA + chrX 4338120 intron norpA + chrX_9_4335001 chrX_4335001 RAL-371_125b 2656 chrX 4700374 4700412 chrX 4700767 4700805 jockey 11 392 2.0 6.0 4.0 2.2 431 chrX 4700374 3` UTR ctp + chrX 4700590 3` UTR ctp + chrX 4700805 3` UTR ctp + chrX_11_4700001 chrX_4700001 RAL-371_125b 2657 chrX 4723529 4723570 chrX 4723659 4723700 11 129 8.5 5.5 7.0 1.4 171 chrX 4723529 exon Proc-R + chrX 4723614 intron Proc-R + chrX 4723700 intron Proc-R + chrX_11_4720001 chrX_4720001 RAL-371_125b 2658 chrX 4744108 4744146 chrX 4744256 4744294 4 148 2.5 2.0 2.2 1.2 186 chrX 4744108 intergenic not near genes chrX 4744201 intergenic not near genes chrX 4744294 intergenic not near genes chrX_4_4740001 chrX_4740001 RAL-371_125b 2659 chrX 4759360 4759394 chrX 4759486 4759520 7 124 4.5 7.5 6.0 1.0 160 chrX 4759360 intergenic not near genes chrX 4759440 intergenic not near genes chrX 4759520 intergenic not near genes chrX_7_4755001 chrX_4755001 RAL-371_125b 2660 chrX 4763212 4763224 chrX 4763750 4763762 Stalker4 4 538 8.0 3.5 5.8 0.6 550 chrX 4763212 intergenic not near genes chrX 4763487 intergenic not near genes chrX 4763762 intergenic not near genes chrX_4_4760001 chrX_4760001 RAL-371_125b 2661 chrX 4763227 4763262 chrX 4763746 4763800 Stalker4 6 535 6.0 3.5 4.8 1.0 573 chrX 4763227 intergenic not near genes chrX 4763514 intergenic not near genes chrX 4763800 intergenic not near genes chrX_6_4760001 chrX_4760001 RAL-371_125b 2662 chrX 4827926 4827990 chrX 4835347 4835386 Stalker4 8 7417 6.0 4.0 5.0 1.3 7460 chrX 4827926 intergenic not near genes chrX 4831656 intergenic not near genes chrX 4835386 intergenic not near genes chrX_8_4830001 chrX_4830001 RAL-371_125b 2663 chrX 4864146 4864172 chrX 4864263 4864276 5 121 4.0 6.0 5.0 0.8 130 chrX 4864146 intron CG42594 + chrX 4864211 intron CG42594 + chrX 4864276 intron CG42594 + chrX_5_4860001 chrX_4860001 RAL-371_125b 2664 chrX 4871169 4871229 chrX 4871316 4871379 9 148 2.0 0.0 1.0 4.5 210 chrX 4871169 intron CG42594 + chrX 4871274 intron CG42594 + chrX 4871379 intron CG42594 + chrX_9_4870001 chrX_4870001 RAL-371_125b 2665 chrX 4931303 4931371 chrX 4931447 4931515 4 140 19.0 19.5 19.2 0.2 212 chrX 4931303 intron CG44774 - chrX 4931409 intron CG44774 - chrX 4931515 intron CG44774 - chrX_4_4930001 chrX_4930001 RAL-371_125b 2666 chrX 4961805 4961870 chrX 4962057 4962122 7 252 2.0 3.5 2.8 1.8 317 chrX 4961805 intron CR44833 - chrX 4961964 intron CR44833 - chrX 4962122 intron CR44833 - chrX_7_4960001 chrX_4960001 RAL-371_125b 2667 chrX 5038186 5038237 chrX 5038374 5038425 6 188 4.0 3.0 3.5 1.3 239 chrX 5038186 intron CR44833 - chrX 5038306 intron CR44833 - chrX 5038425 intron CR44833 - chrX_6_5035001 chrX_5035001 RAL-371_125b 2668 chrX 5096231 5096281 chrX 5103846 5103896 springer 9 7614 2.5 2.0 2.2 2.8 7665 chrX 5096231 intron,intron CG15465 +,rg + chrX 5100064 intron,intron CG15465 +,rg + chrX 5103896 intron,intron CG15465 +,rg + chrX_9_5100001 chrX_5100001 RAL-371_125b 2669 chrX 5131355 5131426 chrX 5131486 5131541 14 113 2.5 5.0 3.8 2.9 186 chrX 5131355 intron,intron CG15465 +,rg + chrX 5131448 intron,intron CG15465 +,rg + chrX 5131541 intron,intron CG15465 +,rg + chrX_14_5130001 chrX_5130001 RAL-371_125b 2670 chrX 5159691 5159712 chrX 5159836 5159857 4 145 2.0 4.5 3.2 1.0 166 chrX 5159691 intron,intron CG15465 +,rg + chrX 5159774 intron,intron CG15465 +,rg + chrX 5159857 intron,intron CG15465 +,rg + chrX_4_5155001 chrX_5155001 RAL-371_125b 2671 chrX 5272779 5272848 chrX 5272916 5272964 4 131 2.0 3.5 2.8 1.1 185 chrX 5272779 intergenic not near genes chrX 5272872 intergenic not near genes chrX 5272964 intergenic not near genes chrX_4_5270001 chrX_5270001 RAL-371_125b 2672 chrX 5291470 5291731 chrX 5291603 5291847 4 127 6.5 7.5 7.0 0.5 377 chrX 5291470 intergenic not near genes chrX 5291658 intergenic not near genes chrX 5291847 intergenic not near genes chrX_4_5290001 chrX_5290001 RAL-371_125b 2673 chrX 5338688 5338729 chrX 5339991 5339995 jockey 4 1283 2.0 3.5 2.8 1.1 1307 chrX 5338688 intergenic not near genes chrX 5339342 intergenic not near genes chrX 5339995 intergenic SK + chrX_4_5335001 chrX_5335001 RAL-371_125b 2674 chrX 5345001 5345037 chrX 5345227 5345268 10 232 0.5 2.5 1.5 4.0 267 chrX 5345001 intron SK + chrX 5345134 intron SK + chrX 5345268 intron SK + chrX_10_5345001 chrX_5345001 RAL-371_125b 2675 chrX 5350284 5350315 chrX 5350413 5350444 6 129 4.5 8.0 6.2 0.8 160 chrX 5350284 intron SK + chrX 5350364 intron SK + chrX 5350444 intron SK + chrX_6_5350001 chrX_5350001 RAL-371_125b 2676 chrX 5479120 5479169 chrX 5479250 5479295 11 130 3.5 1.5 2.5 3.1 175 chrX 5479120 exon SPR + chrX 5479208 intron SPR + chrX 5479295 intron SPR + chrX_11_5475001 chrX_5475001 RAL-371_125b 2677 chrX 5481071 5481075 chrX 5485081 5485085 I-element 5 4010 0.0 2.0 1.0 2.5 4014 chrX 5481071 intron SPR + chrX 5483078 intron SPR + chrX 5485085 intron SPR + chrX_5_5480001 chrX_5480001 RAL-371_125b 2678 chrX 5515165 5515235 chrX 5515302 5515369 6 132 3.0 0.0 1.5 2.4 204 chrX 5515165 intergenic not near genes chrX 5515267 intergenic not near genes chrX 5515369 intergenic not near genes chrX_6_5515001 chrX_5515001 RAL-371_125b 2679 chrX 5524801 5524821 chrX 5528710 5528730 412 6 3909 6.0 0.0 3.0 1.5 3929 chrX 5524801 intergenic snoRNA:Psi28S-3342 - chrX 5526766 intergenic not near genes chrX 5528730 intergenic Vsx2 - chrX_6_5525001 chrX_5525001 RAL-371_125b 2680 chrX 5555339 5555358 chrX 5555498 5555502 4 159 6.0 2.5 4.2 0.8 163 chrX 5555339 intron Vsx2 - chrX 5555420 intron Vsx2 - chrX 5555502 intron Vsx2 - chrX_4_5555001 chrX_5555001 RAL-371_125b 2681 chrX 5555359 5555388 chrX 5555496 5555562 5 146 3.5 2.5 3.0 1.2 203 chrX 5555359 intron Vsx2 - chrX 5555460 intron Vsx2 - chrX 5555562 intron Vsx2 - chrX_5_5555001 chrX_5555001 RAL-371_125b 2682 chrX 5566773 5566784 chrX 5566869 5566899 4 113 3.5 5.0 4.2 0.8 126 chrX 5566773 intergenic not near genes chrX 5566836 intergenic not near genes chrX 5566899 intergenic not near genes chrX_4_5565001 chrX_5565001 RAL-371_125b 2683 chrX 5704658 5704716 chrX 5704779 5704835 11 126 2.5 2.5 2.5 3.1 177 chrX 5704658 exon CG4096 + chrX 5704746 intron CG4096 + chrX 5704835 intron CG4096 + chrX_11_5700001 chrX_5700001 RAL-371_125b 2684 chrX 5727377 5727414 chrX 5732166 5732203 Doc 8 4786 3.0 1.0 2.0 2.7 4826 chrX 5727377 intron CG32758 - chrX 5729790 intron CG32758 - chrX 5732203 intron CG32758 - chrX_8_5725001 chrX_5725001 RAL-371_125b 2685 chrX 5798850 5798889 chrX 5799062 5799101 9 210 0.0 7.0 3.5 2.0 251 chrX 5798850 intergenic not near genes chrX 5798976 intergenic not near genes chrX 5799101 intergenic not near genes chrX_9_5795001 chrX_5795001 RAL-371_125b 2686 chrX 5883771 5883805 chrX 5884056 5884073 pogo 9 288 5.0 2.5 3.8 1.9 302 chrX 5883771 intron CR45668 - chrX 5883922 intron CR45668 - chrX 5884073 intron CR45668 - chrX_9_5880001 chrX_5880001 RAL-371_125b 2687 chrX 5884122 5884178 chrX 5884413 5884469 pogo 9 291 5.5 4.5 5.0 1.5 347 chrX 5884122 intron CR45668 - chrX 5884296 intron CR45668 - chrX 5884469 intron CR45668 - chrX_9_5880001 chrX_5880001 RAL-371_125b 2688 chrX 6118663 6118729 chrX 6118795 6118843 12 130 4.0 4.5 4.2 2.3 180 chrX 6118663 intron Ca-alpha1T - chrX 6118753 intron Ca-alpha1T - chrX 6118843 intron Ca-alpha1T - chrX_12_6115001 chrX_6115001 RAL-371_125b 2689 chrX 6171534 6171598 chrX 6179021 6179085 Quasimodo 6 7487 2.5 4.0 3.2 1.4 7551 chrX 6171534 intron Ca-alpha1T - chrX 6175310 intron Ca-alpha1T - chrX 6179085 intron Ca-alpha1T - chrX_6_6175001 chrX_6175001 RAL-371_125b 2690 chrX 6215488 6215521 chrX 6215619 6215647 4 130 6.5 7.5 7.0 0.5 159 chrX 6215488 intergenic not near genes chrX 6215568 intergenic not near genes chrX 6215647 intergenic not near genes chrX_4_6215001 chrX_6215001 RAL-371_125b 2691 chrX 6219407 6219461 chrX 6219539 6219593 7 132 2.5 3.0 2.8 1.8 186 chrX 6219407 intergenic Btd - chrX 6219500 intergenic Btd -,Efr + chrX 6219593 intergenic Btd -,Efr + chrX_7_6215001 chrX_6215001 RAL-371_125b 2692 chrX 6335211 6335236 chrX 6337751 6337796 Tirant 4 2554 0.5 6.0 3.2 1.0 2585 chrX 6335211 intergenic not near genes chrX 6336504 intergenic not near genes chrX 6337796 5` UTR CG3842 + chrX_4_6335001 chrX_6335001 RAL-371_125b 2693 chrX 6388617 6388690 chrX 6388743 6388816 11 125 3.0 4.0 3.5 2.4 199 chrX 6388617 intergenic not near genes chrX 6388716 intergenic not near genes chrX 6388816 intergenic not near genes chrX_11_6385001 chrX_6385001 RAL-371_125b 2694 chrX 6392828 6392892 chrX 6397643 6397707 Doc 11 4809 5.0 2.5 3.8 2.3 4879 chrX 6392828 intergenic not near genes chrX 6395268 intergenic not near genes chrX 6397707 intergenic not near genes chrX_11_6395001 chrX_6395001 RAL-371_125b 2695 chrX 6404751 6404815 chrX 6405557 6405631 15 807 0.0 4.0 2.0 5.0 880 chrX 6404751 intergenic not near genes chrX 6405191 intergenic not near genes chrX 6405631 intergenic not near genes chrX_15_6405001 chrX_6405001 RAL-371_125b 2696 chrX 6470378 6470435 chrX 6470521 6470578 12 143 1.0 4.5 2.8 3.2 200 chrX 6470378 intron CG42340 - chrX 6470478 intron CG42340 - chrX 6470578 intron CG42340 - chrX_12_6470001 chrX_6470001 RAL-371_125b 2697 chrX 6562815 6562838 chrX 6571340 6571349 Tirant 6 8519 5.0 7.5 6.2 0.8 8534 chrX 6562815 intron CG34417 + chrX 6567082 intron CG34417 + chrX 6571349 intron CG34417 + chrX_6_6565001 chrX_6565001 RAL-371_125b 2698 chrX 6591805 6591851 chrX 6591940 6591986 9 132 4.5 0.0 2.2 2.8 181 chrX 6591805 intron Pat1 + chrX 6591896 intron Pat1 + chrX 6591986 intron Pat1 + chrX_9_6590001 chrX_6590001 RAL-371_125b 2699 chrX 6605450 6605497 chrX 6608522 6608569 Burdock 7 3070 2.5 3.5 3.0 1.8 3119 chrX 6605450 intron pigs + chrX 6607010 intron pigs + chrX 6608569 intron pigs + chrX_7_6605001 chrX_6605001 RAL-371_125b 2700 chrX 6618431 6618470 chrX 6618557 6618598 7 125 6.0 5.0 5.5 1.1 167 chrX 6618431 intron pigs + chrX 6618514 intron pigs + chrX 6618598 intron pigs + chrX_7_6615001 chrX_6615001 RAL-371_125b 2701 chrX 6733394 6733664 chrX 6733530 6733799 23 133 9.5 3.5 6.5 3.1 405 chrX 6733394 intron,intron CG3168 -,CR43461 + chrX 6733596 intron,intron CG3168 -,CR43461 + chrX 6733799 intron,intron CG3168 -,CR43461 + chrX_23_6730001 chrX_6730001 RAL-371_125b 2702 chrX 6737491 6737523 chrX 6737623 6737655 5 132 4.0 4.0 4.0 1.0 164 chrX 6737491 intron CG3168 - chrX 6737573 intron CG3168 - chrX 6737655 intron CG3168 - chrX_5_6735001 chrX_6735001 RAL-371_125b 2703 chrX 6865746 6865789 chrX 6865877 6865923 7 133 3.5 3.5 3.5 1.6 177 chrX 6865746 intron CG14434 - chrX 6865834 intron CG14434 - chrX 6865923 intron CG14434 - chrX_7_6865001 chrX_6865001 RAL-371_125b 2704 chrX 6896195 6896225 chrX 6896326 6896355 10 130 3.5 7.0 5.2 1.6 160 chrX 6896195 intergenic not near genes chrX 6896275 intergenic not near genes chrX 6896355 intergenic not near genes chrX_10_6895001 chrX_6895001 RAL-371_125b 2705 chrX 6897567 6897698 chrX 6897695 6897842 14 152 0.0 0.0 0.0 14.0 275 chrX 6897567 intergenic not near genes chrX 6897704 intergenic not near genes chrX 6897842 intergenic not near genes chrX_14_6895001 chrX_6895001 RAL-371_125b 2706 chrX 6901347 6901379 chrX 6901454 6901481 9 118 2.0 4.5 3.2 2.1 134 chrX 6901347 intergenic not near genes chrX 6901414 intergenic not near genes chrX 6901481 intergenic not near genes chrX_9_6900001 chrX_6900001 RAL-371_125b 2707 chrX 6989485 6989529 chrX 6989622 6989665 6 137 4.0 3.5 3.8 1.2 180 chrX 6989485 intron ogre - chrX 6989575 intron ogre - chrX 6989665 intron ogre - chrX_6_6985001 chrX_6985001 RAL-371_125b 2708 chrX 7023568 7023615 chrX 7031008 7031055 Tabor 9 7438 3.5 3.5 3.5 2.0 7487 chrX 7023568 intron CG12541 - chrX 7027312 intron CG12541 - chrX 7031055 intron CG12541 - chrX_9_7025001 chrX_7025001 RAL-371_125b 2709 chrX 7125221 7125266 chrX 7134419 7134475 roo 6 9207 0.0 4.5 2.2 1.9 9254 chrX 7125221 intergenic not near genes chrX 7129848 intergenic not near genes chrX 7134475 intergenic not near genes chrX_6_7125001 chrX_7125001 RAL-371_125b 2710 chrX 7250531 7250597 chrX 7250855 7250910 6 320 0.0 3.0 1.5 2.4 379 chrX 7250531 intron CR44357 - chrX 7250720 intron CR44357 - chrX 7250910 intron CR44357 - chrX_6_7250001 chrX_7250001 RAL-371_125b 2711 chrX 7322859 7322907 chrX 7322993 7323041 12 134 3.5 3.5 3.5 2.7 182 chrX 7322859 intron,intron,intron CR44357 -,CG1677 -,Atg5 - chrX 7322950 intron,intron,intron CR44357 -,CG1677 -,Atg5 - chrX 7323041 intron,intron,intron CR44357 -,CG1677 -,Atg5 - chrX_12_7320001 chrX_7320001 RAL-371_125b 2712 chrX 7330954 7330990 chrX 7331268 7331304 4 314 18.0 13.5 15.8 0.2 350 chrX 7330954 intron,intron,exon CR44357 -,CG1677 -,CG18155 + chrX 7331129 intron,intron,exon CR44357 -,CG1677 -,CG18155 + chrX 7331304 intron,intron,exon CR44357 -,CG1677 -,CG42780 - chrX_4_7330001 chrX_7330001 RAL-371_125b 2713 chrX 7345152 7345194 chrX 7345294 7345336 9 141 4.5 4.0 4.2 1.7 184 chrX 7345152 intron,intron CR44357 -,CG1677 - chrX 7345244 intron,intron CR44357 -,CG1677 - chrX 7345336 intron,intron CR44357 -,CG1677 - chrX_9_7345001 chrX_7345001 RAL-371_125b 2714 chrX 7409470 7409501 chrX 7409601 7409627 7 124 5.0 3.0 4.0 1.4 157 chrX 7409470 intergenic not near genes chrX 7409548 intergenic not near genes chrX 7409627 intergenic not near genes chrX_7_7405001 chrX_7405001 RAL-371_125b 2715 chrX 7409513 7409538 chrX 7409593 7409653 5 118 2.5 2.5 2.5 1.4 140 chrX 7409513 intergenic not near genes chrX 7409583 intergenic not near genes chrX 7409653 intergenic not near genes chrX_5_7405001 chrX_7405001 RAL-371_125b 2716 chrX 7658957 7658980 chrX 7659141 7659164 4 184 6.5 7.0 6.8 0.5 207 chrX 7658957 intron ct + chrX 7659060 intron ct + chrX 7659164 intron ct + chrX_4_7655001 chrX_7655001 RAL-371_125b 2717 chrX 7702448 7702521 chrX 7702602 7702663 8 146 0.0 4.5 2.2 2.5 215 chrX 7702448 intron CHES-1-like - chrX 7702556 intron CHES-1-like - chrX 7702663 intron CHES-1-like - chrX_8_7700001 chrX_7700001 RAL-371_125b 2718 chrX 7702868 7702903 chrX 7703357 7703392 jockey 10 489 5.5 1.5 3.5 2.2 524 chrX 7702868 intron CHES-1-like - chrX 7703130 intron CHES-1-like - chrX 7703392 intron CHES-1-like - chrX_10_7700001 chrX_7700001 RAL-371_125b 2719 chrX 7728399 7728460 chrX 7728668 7728729 14 268 3.0 6.5 4.8 2.4 330 chrX 7728399 intergenic NELF-B -,CG12155 + chrX 7728564 intergenic CG12155 +,NELF-B - chrX 7728729 intergenic CG12155 +,NELF-B - chrX_14_7725001 chrX_7725001 RAL-371_125b 2720 chrX 7832391 7832461 chrX 7832530 7832600 9 137 1.5 4.5 3.0 2.2 209 chrX 7832391 intron CG1402 + chrX 7832496 intron CG1402 + chrX 7832600 intron CG1402 + chrX_9_7830001 chrX_7830001 RAL-371_125b 2721 chrX 8031405 8031443 chrX 8035764 8035802 Juan 8 4357 5.0 3.0 4.0 1.6 4397 chrX 8031405 intergenic not near genes chrX 8033604 intergenic not near genes chrX 8035802 3` UTR CG2233 - chrX_8_8030001 chrX_8030001 RAL-371_125b 2722 chrX 8057467 8057547 chrX 8057845 8057917 10 364 3.0 2.0 2.5 2.9 450 chrX 8057467 intergenic not near genes chrX 8057692 intergenic not near genes chrX 8057917 intergenic not near genes chrX_10_8055001 chrX_8055001 RAL-371_125b 2723 chrX 8063695 8063760 chrX 8063838 8063905 13 145 1.5 2.0 1.8 4.6 210 chrX 8063695 intron mys + chrX 8063800 intron mys + chrX 8063905 5` UTR mys + chrX_13_8060001 chrX_8060001 RAL-371_125b 2724 chrX 8092252 8092310 chrX 8092384 8092445 12 135 3.0 2.0 2.5 3.4 193 chrX 8092252 intron Ubc-E2H - chrX 8092348 intron Ubc-E2H - chrX 8092445 intron Ubc-E2H - chrX_12_8090001 chrX_8090001 RAL-371_125b 2725 chrX 8211184 8211219 chrX 8211311 8211338 5 125 7.5 5.0 6.2 0.7 154 chrX 8211184 intron sdt + chrX 8211261 intron sdt + chrX 8211338 intron sdt + chrX_5_8210001 chrX_8210001 RAL-371_125b 2726 chrX 8211228 8211238 chrX 8211310 8211315 4 96 6.5 5.5 6.0 0.6 87 chrX 8211228 intron sdt + chrX 8211272 intron sdt + chrX 8211315 intron sdt + chrX_4_8210001 chrX_8210001 RAL-371_125b 2727 chrX 8226875 8226923 chrX 8227002 8227034 8 119 4.5 3.0 3.8 1.7 159 chrX 8226875 intron sdt + chrX 8226954 intron sdt + chrX 8227034 intron sdt + chrX_8_8225001 chrX_8225001 RAL-371_125b 2728 chrX 8260584 8260651 chrX 8260893 8260959 9 304 4.5 3.0 3.8 1.9 375 chrX 8260584 intron CG1632 + chrX 8260772 intron CG1632 + chrX 8260959 intron CG1632 + chrX_9_8260001 chrX_8260001 RAL-371_125b 2729 chrX 8263723 8263782 chrX 8263859 8263918 5 136 0.0 0.5 0.2 4.2 195 chrX 8263723 intron CG1632 + chrX 8263820 intron CG1632 + chrX 8263918 intron CG1632 + chrX_5_8260001 chrX_8260001 RAL-371_125b 2730 chrX 8371104 8371159 chrX 8371315 8371363 4 206 2.5 0.5 1.5 1.6 259 chrX 8371104 intergenic not near genes chrX 8371234 intergenic not near genes chrX 8371363 intergenic not near genes chrX_4_8370001 chrX_8370001 RAL-371_125b 2731 chrX 8506496 8506553 chrX 8506754 8506804 11 246 2.5 1.5 2.0 3.7 308 chrX 8506496 intron CG33181 + chrX 8506650 intron CG33181 + chrX 8506804 intron CG33181 + chrX_11_8505001 chrX_8505001 RAL-371_125b 2732 chrX 8605302 8605318 chrX 8605396 8605430 5 111 5.5 3.5 4.5 0.9 128 chrX 8605302 exon Caf1-180 - chrX 8605366 exon Caf1-180 - chrX 8605430 exon Caf1-180 - chrX_5_8605001 chrX_8605001 RAL-371_125b 2733 chrX 8708689 8708761 chrX 8708822 8708894 15 135 17.0 18.0 17.5 0.8 205 chrX 8708689 intergenic not near genes chrX 8708792 intergenic not near genes chrX 8708894 intergenic not near genes chrX_15_8705001 chrX_8705001 RAL-371_125b 2734 chrX 8730448 8730457 chrX 8730574 8730583 4 126 0.0 4.0 2.0 1.3 135 chrX 8730448 intergenic not near genes chrX 8730516 intergenic not near genes chrX 8730583 intergenic not near genes chrX_4_8730001 chrX_8730001 RAL-371_125b 2735 chrX 8842549 8842597 chrX 8842701 8842749 7 152 1.0 2.5 1.8 2.5 200 chrX 8842549 intron CG12075 + chrX 8842649 intron CG12075 + chrX 8842749 intron CG12075 + chrX_7_8840001 chrX_8840001 RAL-371_125b 2736 chrX 8885624 8885693 chrX 8885774 8885833 13 148 0.0 3.5 1.8 4.6 209 chrX 8885624 intron Moe - chrX 8885728 intron Moe - chrX 8885833 intron Moe - chrX_13_8885001 chrX_8885001 RAL-371_125b 2737 chrX 8922296 8922345 chrX 8922775 8922829 jockey 8 481 4.0 6.0 5.0 1.3 533 chrX 8922296 intron rdgA + chrX 8922562 intron rdgA + chrX 8922829 intron rdgA + chrX_8_8920001 chrX_8920001 RAL-371_125b 2738 chrX 8927541 8927610 chrX 8929861 8929930 NOF 10 2319 3.0 4.0 3.5 2.2 2389 chrX 8927541 intron rdgA + chrX 8928736 intron rdgA + chrX 8929930 intron rdgA + chrX_10_8925001 chrX_8925001 RAL-371_125b 2739 chrX 9129445 9129498 chrX 9129581 9129634 10 135 5.0 4.0 4.5 1.8 189 chrX 9129445 intron fend - chrX 9129540 intron fend - chrX 9129634 intron fend - chrX_10_9125001 chrX_9125001 RAL-371_125b 2740 chrX 9337895 9337964 chrX 9338037 9338106 9 137 4.0 2.5 3.2 2.1 211 chrX 9337895 intron CG34449 - chrX 9338000 intron CG34449 - chrX 9338106 exon CG34449 - chrX_9_9335001 chrX_9335001 RAL-371_125b 2741 chrX 9503211 9503211 chrX 22383088 22383377 10 12880134 10.0 108.5 59.2 0.2 12880166 chrX 9503211 3` UTR CG32700 - chrX 15943294 intron CG8924 + chrX 22383377 intergenic not near genes chrX_10_15940001 chrX_15940001 RAL-371_125b 2742 chrX 9508107 9508151 chrX 9509675 9509719 jockey 10 1567 6.5 3.5 5.0 1.7 1612 chrX 9508107 intron CG32700 - chrX 9508913 intron CG32700 - chrX 9509719 intron CG32700 - chrX_10_9505001 chrX_9505001 RAL-371_125b 2743 chrX 9575761 9575822 chrX 9576114 9576173 mdg3 15 365 2.0 1.0 1.5 6.0 412 chrX 9575761 intron,exon CG32699 -,CG42395 - chrX 9575967 intron,intron CG32699 -,CG42395 - chrX 9576173 intron,5` UTR CG32699 -,CG42395 - chrX_15_9575001 chrX_9575001 RAL-371_125b 2744 chrX 9961039 9961105 chrX 9961174 9961194 8 123 2.0 3.0 2.5 2.3 155 chrX 9961039 intergenic not near genes chrX 9961116 intergenic not near genes chrX 9961194 intergenic not near genes chrX_8_9960001 chrX_9960001 RAL-371_125b 2745 chrX 10077176 10077212 chrX 10077314 10077350 6 135 6.0 3.5 4.8 1.0 174 chrX 10077176 intron ZAP3 - chrX 10077263 intron ZAP3 - chrX 10077350 intron ZAP3 - chrX_6_10075001 chrX_10075001 RAL-371_125b 2746 chrX 10138191 10138243 chrX 10145730 10145797 412 10 7550 4.0 2.0 3.0 2.5 7606 chrX 10138191 intron,intron RhoU +,CR44894 - chrX 10141994 intron,intron RhoU +,CR44894 - chrX 10145797 intron,intron RhoU +,CR44894 - chrX_10_10140001 chrX_10140001 RAL-371_125b 2747 chrX 10149965 10150034 chrX 10150238 10150279 9 267 3.0 0.5 1.8 3.2 314 chrX 10149965 intron CR44894 - chrX 10150122 intron CR44894 - chrX 10150279 intron CR44894 - chrX_9_10150001 chrX_10150001 RAL-371_125b 2748 chrX 10216798 10216840 chrX 10216929 10216966 4 130 7.0 6.0 6.5 0.5 168 chrX 10216798 3` UTR l(1)G0230 + chrX 10216882 3` UTR l(1)G0230 + chrX 10216966 3` UTR l(1)G0230 + chrX_4_10215001 chrX_10215001 RAL-371_125b 2749 chrX 10295207 10295272 chrX 10295656 10295721 8 449 2.0 2.5 2.2 2.5 514 chrX 10295207 intron alpha-Man-I - chrX 10295464 intron alpha-Man-I - chrX 10295721 intron alpha-Man-I - chrX_8_10295001 chrX_10295001 RAL-371_125b 2750 chrX 10317531 10317580 chrX 10317659 10317708 7 128 0.0 4.0 2.0 2.3 177 chrX 10317531 intron alpha-Man-I - chrX 10317620 intron alpha-Man-I - chrX 10317708 intron alpha-Man-I - chrX_7_10315001 chrX_10315001 RAL-371_125b 2751 chrX 10348755 10348817 chrX 10356369 10356432 springer 7 7614 3.5 2.0 2.8 1.8 7677 chrX 10348755 intergenic snoRNA:U3:9B + chrX 10352594 intergenic not near genes chrX 10356432 intergenic l(1)G0289 - chrX_7_10350001 chrX_10350001 RAL-371_125b 2752 chrX 10367167 10367185 chrX 10367301 10367329 6 147 5.0 2.5 3.8 1.2 162 chrX 10367167 exon CG32679 - chrX 10367248 intron CG32679 - chrX 10367329 exon CG32679 - chrX_6_10365001 chrX_10365001 RAL-371_125b 2753 chrX 10506473 10506527 chrX 10506597 10506634 9 124 2.0 2.0 2.0 3.0 161 chrX 10506473 intron spri - chrX 10506554 intron spri - chrX 10506634 intron spri - chrX_9_10505001 chrX_10505001 RAL-371_125b 2754 chrX 10532463 10532527 chrX 10532592 10532656 15 129 5.5 5.5 5.5 2.3 193 chrX 10532463 intron spri - chrX 10532560 intron spri - chrX 10532656 intron spri - chrX_15_10530001 chrX_10530001 RAL-371_125b 2755 chrX 10550288 10550359 chrX 10550416 10550487 8 127 2.0 2.5 2.2 2.5 199 chrX 10550288 intron spri - chrX 10550388 intron spri - chrX 10550487 intron spri - chrX_8_10550001 chrX_10550001 RAL-371_125b 2756 chrX 10550817 10550877 chrX 10552334 10552394 hobo 8 1516 3.5 2.5 3.0 2.0 1577 chrX 10550817 intron spri - chrX 10551606 intron spri - chrX 10552394 intron spri - chrX_8_10550001 chrX_10550001 RAL-371_125b 2757 chrX 10651596 10651631 chrX 10651762 10651797 5 166 0.0 2.5 1.2 2.3 201 chrX 10651596 intron X11Lbeta + chrX 10651696 intron X11Lbeta + chrX 10651797 intron X11Lbeta + chrX_5_10650001 chrX_10650001 RAL-371_125b 2758 chrX 10772637 10772697 chrX 10772762 10772830 Tirant 9 127 4.0 4.0 4.0 1.8 193 chrX 10772637 intron CG15211 + chrX 10772734 intron CG15211 + chrX 10772830 intron CG15211 + chrX_9_10770001 chrX_10770001 RAL-371_125b 2759 chrX 10933889 10933943 chrX 10934008 10934081 9 131 0.0 0.5 0.2 7.5 192 chrX 10933889 intron Myo10A + chrX 10933985 intron Myo10A + chrX 10934081 intron Myo10A + chrX_9_10930001 chrX_10930001 RAL-371_125b 2760 chrX 10937642 10937676 chrX 10937832 10937866 5 190 4.5 2.0 3.2 1.2 224 chrX 10937642 intron Myo10A + chrX 10937754 intron Myo10A + chrX 10937866 intron Myo10A + chrX_5_10935001 chrX_10935001 RAL-371_125b 2761 chrX 11095958 11096015 chrX 11103110 11103167 HMS-Beagle 10 7152 2.5 3.5 3.0 2.5 7209 chrX 11095958 intergenic not near genes chrX 11099562 intergenic not near genes chrX 11103167 intron CG42249 + chrX_10_11095001 chrX_11095001 RAL-371_125b 2762 chrX 11109417 11109417 chrX 12946233 12946234 5 1836817 6.5 11.0 8.8 0.5 1836817 chrX 11109417 intron Hsp60 + chrX 12027826 exon Usp7 - chrX 12946234 3` UTR fne + chrX_5_12025001 chrX_12025001 RAL-371_125b 2763 chrX 11165831 11165901 chrX 11166213 11166283 4 382 2.5 1.5 2.0 1.3 452 chrX 11165831 intergenic not near genes chrX 11166057 intergenic not near genes chrX 11166283 intergenic not near genes chrX_4_11165001 chrX_11165001 RAL-371_125b 2764 chrX 11184213 11184266 chrX 11189332 11189392 flea 5 5124 3.5 2.0 2.8 1.3 5179 chrX 11184213 intergenic not near genes chrX 11186802 intergenic not near genes chrX 11189392 intergenic not near genes chrX_5_11185001 chrX_11185001 RAL-371_125b 2765 chrX 11237073 11237114 chrX 11237601 11237641 6 525 1.5 1.5 1.5 2.4 568 chrX 11237073 intron CG44422 - chrX 11237357 intron CG44422 - chrX 11237641 intron CG44422 - chrX_6_11235001 chrX_11235001 RAL-371_125b 2766 chrX 11312034 11312081 chrX 11319424 11319474 Stalker2 6 7390 3.0 4.5 3.8 1.2 7440 chrX 11312034 intergenic not near genes chrX 11315754 intergenic not near genes chrX 11319474 intergenic not near genes chrX_6_11315001 chrX_11315001 RAL-371_125b 2767 chrX 11319907 11319923 chrX 11320066 11320082 5 158 7.0 0.5 3.8 1.0 175 chrX 11319907 intergenic not near genes chrX 11319994 intergenic not near genes chrX 11320082 intergenic not near genes chrX_5_11315001 chrX_11315001 RAL-371_125b 2768 chrX 11379716 11379747 chrX 11379911 11379942 9 191 4.5 3.5 4.0 1.8 226 chrX 11379716 intron dlg1 + chrX 11379829 intron dlg1 + chrX 11379942 intron dlg1 + chrX_9_11375001 chrX_11375001 RAL-371_125b 2769 chrX 11379751 11379784 chrX 11379910 11379979 5 184 2.5 3.5 3.0 1.2 228 chrX 11379751 intron dlg1 + chrX 11379865 intron dlg1 + chrX 11379979 intron dlg1 + chrX_5_11375001 chrX_11375001 RAL-371_125b 2770 chrX 11499069 11499114 chrX 11499197 11499242 7 127 5.0 3.0 4.0 1.4 173 chrX 11499069 intron Drak + chrX 11499156 intron Drak + chrX 11499242 intron Drak + chrX_7_11495001 chrX_11495001 RAL-371_125b 2771 chrX 11535012 11535041 chrX 11541532 11541561 Burdock 6 6517 5.0 2.5 3.8 1.2 6549 chrX 11535012 intron Drak + chrX 11538286 intron Drak + chrX 11541561 intron Drak + chrX_6_11535001 chrX_11535001 RAL-371_125b 2772 chrX 11571426 11571464 chrX 11571713 11571751 pogo 6 286 4.0 4.0 4.0 1.2 325 chrX 11571426 3` UTR Kmn1 - chrX 11571588 3` UTR Kmn1 - chrX 11571751 3` UTR Kmn1 - chrX_6_11570001 chrX_11570001 RAL-371_125b 2773 chrX 11633381 11633433 chrX 11640485 11640537 297 4 7104 3.5 6.5 5.0 0.7 7156 chrX 11633381 intron Ptp10D + chrX 11636959 intron Ptp10D + chrX 11640537 intron Ptp10D + chrX_4_11635001 chrX_11635001 RAL-371_125b 2774 chrX 11645071 11645129 chrX 11648291 11648349 NOF 10 3220 2.0 4.0 3.0 2.5 3278 chrX 11645071 intron Ptp10D + chrX 11646710 intron Ptp10D + chrX 11648349 intron Ptp10D + chrX_10_11645001 chrX_11645001 RAL-371_125b 2775 chrX 11719837 11719894 chrX 11719966 11719989 4 121 3.5 2.0 2.8 1.1 152 chrX 11719837 3` UTR prtp + chrX 11719913 intergenic prtp +,Tango10 + chrX 11719989 intergenic prtp +,Tango10 + chrX_4_11715001 chrX_11715001 RAL-371_125b 2776 chrX 11761968 11762001 chrX 11762097 11762121 4 127 1.0 2.0 1.5 1.6 153 chrX 11761968 intron m + chrX 11762044 intron m + chrX 11762121 intron m + chrX_4_11760001 chrX_11760001 RAL-371_125b 2777 chrX 11764754 11764813 chrX 11765075 11765134 17 321 3.0 2.5 2.8 4.5 380 chrX 11764754 intron m + chrX 11764944 intron m + chrX 11765134 intron m + chrX_17_11760001 chrX_11760001 RAL-371_125b 2778 chrX 11798968 11799024 chrX 11799104 11799160 10 136 4.5 2.5 3.5 2.2 192 chrX 11798968 intron CkIIbeta + chrX 11799064 intron CkIIbeta + chrX 11799160 intron CkIIbeta + chrX_10_11795001 chrX_11795001 RAL-371_125b 2779 chrX 11999911 11999966 chrX 12000047 12000080 14 133 1.5 3.0 2.2 4.4 169 chrX 11999911 intron fw - chrX 11999996 intron fw - chrX 12000080 intron fw - chrX_14_12000001 chrX_12000001 RAL-371_125b 2780 chrX 12053499 12053540 chrX 12054077 12054118 9 577 4.5 3.0 3.8 1.9 619 chrX 12053499 intron,intron CR43960 +,Ten-a + chrX 12053808 intron,intron CR43960 +,Ten-a + chrX 12054118 intron,intron CR43960 +,Ten-a + chrX_9_12050001 chrX_12050001 RAL-371_125b 2781 chrX 12094610 12094674 chrX 12094794 12094858 7 182 3.5 3.0 3.2 1.7 248 chrX 12094610 intron,intron CR43960 +,Ten-a + chrX 12094734 intron,intron CR43960 +,Ten-a + chrX 12094858 intron,intron CR43960 +,Ten-a + chrX_7_12090001 chrX_12090001 RAL-371_125b 2782 chrX 12168099 12168123 chrX 12173591 12173615 I-element 5 5492 1.5 2.5 2.0 1.7 5516 chrX 12168099 intron Ten-a + chrX 12170857 intron Ten-a + chrX 12173615 intron Ten-a + chrX_5_12170001 chrX_12170001 RAL-371_125b 2783 chrX 12176707 12176768 chrX 12176818 12176888 15 122 1.0 3.5 2.2 4.7 181 chrX 12176707 intron,3` UTR Ten-a +,CG1924 - chrX 12176798 intron,3` UTR Ten-a +,CG1924 - chrX 12176888 intron,3` UTR Ten-a +,CG1924 - chrX_15_12175001 chrX_12175001 RAL-371_125b 2784 chrX 12191549 12191580 chrX 12191687 12191718 5 138 1.0 1.5 1.2 2.3 169 chrX 12191549 intron Ten-a + chrX 12191634 intron Ten-a + chrX 12191718 intron Ten-a + chrX_5_12190001 chrX_12190001 RAL-371_125b 2785 chrX 12202732 12202784 chrX 12202866 12202918 6 133 2.0 2.5 2.2 1.9 186 chrX 12202732 intron Ten-a + chrX 12202825 intron Ten-a + chrX 12202918 intron Ten-a + chrX_6_12200001 chrX_12200001 RAL-371_125b 2786 chrX 12282949 12282980 chrX 12283100 12283131 10 150 4.0 2.5 3.2 2.4 182 chrX 12282949 intron Ten-a + chrX 12283040 intron Ten-a + chrX 12283131 intron Ten-a + chrX_10_12280001 chrX_12280001 RAL-371_125b 2787 chrX 12295281 12295317 chrX 12295407 12295443 4 126 3.5 2.0 2.8 1.1 162 chrX 12295281 exon Ten-a + chrX 12295362 intron Ten-a + chrX 12295443 intron Ten-a + chrX_4_12295001 chrX_12295001 RAL-371_125b 2788 chrX 12349205 12349255 chrX 12349331 12349346 8 121 2.5 2.5 2.5 2.3 141 chrX 12349205 intergenic not near genes chrX 12349276 intergenic not near genes chrX 12349346 intergenic not near genes chrX_8_12345001 chrX_12345001 RAL-371_125b 2789 chrX 12350736 12350760 chrX 12350867 12350891 4 130 9.5 0.0 4.8 0.7 155 chrX 12350736 intergenic not near genes chrX 12350814 intergenic not near genes chrX 12350891 intergenic not near genes chrX_4_12350001 chrX_12350001 RAL-371_125b 2790 chrX 12460830 12460877 chrX 12460960 12461007 11 128 4.5 5.5 5.0 1.8 177 chrX 12460830 intron Rab40 - chrX 12460918 intron Rab40 - chrX 12461007 exon Rab40 - chrX_11_12460001 chrX_12460001 RAL-371_125b 2791 chrX 12511286 12511345 chrX 12511418 12511479 4 133 0.0 2.5 1.2 1.8 193 chrX 12511286 intron CG2556 + chrX 12511382 intron CG2556 + chrX 12511479 intron CG2556 + chrX_4_12510001 chrX_12510001 RAL-371_125b 2792 chrX 12532616 12532668 chrX 12532800 12532839 4 174 4.0 0.5 2.2 1.2 223 chrX 12532616 intron CG43921 - chrX 12532728 intron CG43921 - chrX 12532839 intron CG43921 - chrX_4_12530001 chrX_12530001 RAL-371_125b 2793 chrX 12557131 12557152 chrX 12557236 12557262 4 108 4.5 2.5 3.5 0.9 131 chrX 12557131 intron CG43921 - chrX 12557196 intron CG43921 - chrX 12557262 intron CG43921 - chrX_4_12555001 chrX_12555001 RAL-371_125b 2794 chrX 12635405 12635424 chrX 12635540 12635559 4 135 1.0 3.5 2.2 1.2 154 chrX 12635405 intron Tomosyn + chrX 12635482 intron Tomosyn + chrX 12635559 intron Tomosyn + chrX_4_12635001 chrX_12635001 RAL-371_125b 2795 chrX 12754655 12754678 chrX 12754893 12754915 5 238 3.5 7.0 5.2 0.8 260 chrX 12754655 intergenic CR44619 + chrX 12754785 intergenic CR44619 + chrX 12754915 intergenic CR44619 + chrX_5_12750001 chrX_12750001 RAL-371_125b 2796 chrX 12853376 12853419 chrX 12853515 12853558 5 139 5.0 5.0 5.0 0.8 182 chrX 12853376 intron Pde9 - chrX 12853467 intron Pde9 - chrX 12853558 intron Pde9 - chrX_5_12850001 chrX_12850001 RAL-371_125b 2797 chrX 13146552 13146624 chrX 13146690 13146762 10 138 2.5 5.0 3.8 2.1 210 chrX 13146552 intron CG32645 + chrX 13146657 intron CG32645 + chrX 13146762 intron CG32645 + chrX_10_13145001 chrX_13145001 RAL-371_125b 2798 chrX 13172323 13172371 chrX 13172439 13172471 12 123 6.5 4.0 5.2 1.9 148 chrX 13172323 exon CG34411 - chrX 13172397 intron CG34411 - chrX 13172471 intron CG34411 - chrX_12_13170001 chrX_13170001 RAL-371_125b 2799 chrX 13262451 13262477 chrX 13262605 13262631 4 148 2.5 1.0 1.8 1.4 180 chrX 13262451 3` UTR comt + chrX 13262541 intergenic comt +,HDAC4 - chrX 13262631 intergenic HDAC4 -,comt + chrX_4_13260001 chrX_13260001 RAL-371_125b 2800 chrX 13272128 13272179 chrX 13272255 13272306 14 125 5.0 3.0 4.0 2.8 178 chrX 13272128 intron HDAC4 - chrX 13272217 intron HDAC4 - chrX 13272306 intron HDAC4 - chrX_14_13270001 chrX_13270001 RAL-371_125b 2801 chrX 13278115 13278166 chrX 13278242 13278299 6 131 5.0 4.5 4.8 1.0 184 chrX 13278115 intron HDAC4 - chrX 13278207 intron HDAC4 - chrX 13278299 intron HDAC4 - chrX_6_13275001 chrX_13275001 RAL-371_125b 2802 chrX 13283448 13283491 chrX 13283578 13283621 7 129 2.0 3.5 2.8 1.8 173 chrX 13283448 intron HDAC4 - chrX 13283534 intron HDAC4 - chrX 13283621 intron HDAC4 - chrX_7_13280001 chrX_13280001 RAL-371_125b 2803 chrX 13374794 13374843 chrX 13374924 13374958 5 127 2.5 1.0 1.8 1.8 164 chrX 13374794 intron CG1640 + chrX 13374876 intron CG1640 + chrX 13374958 intron CG1640 + chrX_5_13370001 chrX_13370001 RAL-371_125b 2804 chrX 13429424 13429484 chrX 13430623 13430683 jockey 8 1199 3.0 4.0 3.5 1.8 1259 chrX 13429424 intergenic not near genes chrX 13430054 intergenic not near genes chrX 13430683 intergenic not near genes chrX_8_13430001 chrX_13430001 RAL-371_125b 2805 chrX 13463602 13463678 chrX 13469229 13469305 mdg3 10 5627 2.5 1.0 1.8 3.6 5703 chrX 13463602 intron Neto + chrX 13466454 intron Neto + chrX 13469305 intron Neto + chrX_10_13465001 chrX_13465001 RAL-371_125b 2806 chrX 13501792 13501864 chrX 13502280 13502352 14 486 1.0 5.5 3.2 3.3 560 chrX 13501792 intron Neto + chrX 13502072 intron Neto + chrX 13502352 intron Neto + chrX_14_13500001 chrX_13500001 RAL-371_125b 2807 chrX 13550441 13550482 chrX 13550573 13550614 6 132 1.5 0.0 0.8 3.3 173 chrX 13550441 intergenic not near genes chrX 13550528 intergenic not near genes chrX 13550614 intergenic not near genes chrX_6_13550001 chrX_13550001 RAL-371_125b 2808 chrX 13560527 13560585 chrX 13560658 13560715 9 126 4.0 3.0 3.5 2.0 188 chrX 13560527 intergenic not near genes chrX 13560621 intergenic not near genes chrX 13560715 intergenic not near genes chrX_9_13560001 chrX_13560001 RAL-371_125b 2809 chrX 13577719 13577757 chrX 13578004 13578042 5 281 5.0 2.5 3.8 1.0 323 chrX 13577719 intron Tango13 + chrX 13577880 intron Tango13 + chrX 13578042 intron Tango13 + chrX_5_13575001 chrX_13575001 RAL-371_125b 2810 chrX 13593186 13593197 chrX 13593316 13593327 5 130 0.0 0.5 0.2 4.2 141 chrX 13593186 3` UTR Tango13 + chrX 13593256 intergenic Tango13 +,up - chrX 13593327 intergenic Tango13 +,up - chrX_5_13590001 chrX_13590001 RAL-371_125b 2811 chrX 13776456 13776497 chrX 13776587 13776628 6 131 4.0 2.5 3.2 1.4 172 chrX 13776456 intron rdgB + chrX 13776542 intron rdgB + chrX 13776628 intron rdgB + chrX_6_13775001 chrX_13775001 RAL-371_125b 2812 chrX 13821426 13821466 chrX 13821552 13821593 6 122 1.0 2.0 1.5 2.4 167 chrX 13821426 intron Clic - chrX 13821510 intron Clic - chrX 13821593 intron Clic - chrX_6_13820001 chrX_13820001 RAL-371_125b 2813 chrX 13889101 13889169 chrX 13889300 13889358 10 196 2.5 2.0 2.2 3.1 257 chrX 13889101 intron mamo - chrX 13889230 intron mamo - chrX 13889358 intron mamo - chrX_10_13885001 chrX_13885001 RAL-371_125b 2814 chrX 13916684 13916716 chrX 13916811 13916823 4 121 2.5 3.5 3.0 1.0 139 chrX 13916684 intron mamo - chrX 13916754 intron mamo - chrX 13916823 intron mamo - chrX_4_13915001 chrX_13915001 RAL-371_125b 2815 chrX 13934274 13934303 chrX 13934407 13934436 4 133 4.0 2.5 3.2 1.0 162 chrX 13934274 intron mamo - chrX 13934355 intron mamo - chrX 13934436 intron mamo - chrX_4_13930001 chrX_13930001 RAL-371_125b 2816 chrX 13935503 13935520 chrX 13935636 13935653 5 132 4.5 4.0 4.2 1.0 150 chrX 13935503 intron mamo - chrX 13935578 intron mamo - chrX 13935653 intron mamo - chrX_5_13935001 chrX_13935001 RAL-371_125b 2817 chrX 13943752 13943806 chrX 13943888 13943895 14 129 3.5 4.0 3.8 2.9 143 chrX 13943752 intron mamo - chrX 13943824 intron mamo - chrX 13943895 intron mamo - chrX_14_13940001 chrX_13940001 RAL-371_125b 2818 chrX 14105008 14105030 chrX 14114209 14114231 roo 5 9200 2.0 4.5 3.2 1.2 9223 chrX 14105008 intergenic not near genes chrX 14109620 intergenic not near genes chrX 14114231 5` UTR CR44657 + chrX_5_14105001 chrX_14105001 RAL-371_125b 2819 chrX 14131455 14131490 chrX 14131576 14131606 5 126 4.0 5.0 4.5 0.9 151 chrX 14131455 intergenic not near genes chrX 14131530 intergenic not near genes chrX 14131606 intergenic not near genes chrX_5_14130001 chrX_14130001 RAL-371_125b 2820 chrX 14157551 14157614 chrX 14163258 14163321 297 5 5705 2.0 2.5 2.2 1.6 5770 chrX 14157551 intergenic not near genes chrX 14160436 intergenic not near genes chrX 14163321 intergenic not near genes chrX_5_14160001 chrX_14160001 RAL-371_125b 2821 chrX 14189844 14189867 chrX 14189969 14190010 4 134 3.0 2.5 2.8 1.1 166 chrX 14189844 exon CG11585 + chrX 14189927 exon CG11585 + chrX 14190010 exon CG11585 + chrX_4_14185001 chrX_14185001 RAL-371_125b 2822 chrX 14216751 14216779 chrX 14216886 14216914 7 135 5.5 2.5 4.0 1.4 163 chrX 14216751 intron l(1)G0007 + chrX 14216832 intron l(1)G0007 + chrX 14216914 intron l(1)G0007 + chrX_7_14215001 chrX_14215001 RAL-371_125b 2823 chrX 14331729 14331776 chrX 14331842 14331880 4 122 2.0 3.0 2.5 1.1 151 chrX 14331729 intron dpr8 + chrX 14331804 intron dpr8 + chrX 14331880 intron dpr8 + chrX_4_14330001 chrX_14330001 RAL-371_125b 2824 chrX 14353395 14353448 chrX 14353523 14353581 7 125 1.0 2.5 1.8 2.5 186 chrX 14353395 intron dpr8 + chrX 14353488 intron dpr8 + chrX 14353581 intron dpr8 + chrX_7_14350001 chrX_14350001 RAL-371_125b 2825 chrX 14383915 14383935 chrX 14384049 14384069 4 134 8.0 6.0 7.0 0.5 154 chrX 14383915 intron dpr8 + chrX 14383992 intron dpr8 + chrX 14384069 intron dpr8 + chrX_4_14380001 chrX_14380001 RAL-371_125b 2826 chrX 14395075 14395119 chrX 14395224 14395268 6 149 0.0 2.0 1.0 3.0 193 chrX 14395075 intron dpr8 + chrX 14395172 intron dpr8 + chrX 14395268 intron dpr8 + chrX_6_14395001 chrX_14395001 RAL-371_125b 2827 chrX 14404984 14405010 chrX 14405112 14405133 4 127 1.0 3.5 2.2 1.2 149 chrX 14404984 intron dpr8 + chrX 14405058 intron dpr8 + chrX 14405133 intron dpr8 + chrX_4_14405001 chrX_14405001 RAL-371_125b 2828 chrX 14411216 14411284 chrX 14411344 14411412 10 128 1.5 1.5 1.5 4.0 196 chrX 14411216 intron dpr8 + chrX 14411314 intron dpr8 + chrX 14411412 intron dpr8 + chrX_10_14410001 chrX_14410001 RAL-371_125b 2829 chrX 14416265 14416285 chrX 14421083 14421103 F-element 4 4818 5.0 2.0 3.5 0.9 4838 chrX 14416265 intron dpr8 + chrX 14418684 intron dpr8 + chrX 14421103 intron dpr8 + chrX_4_14415001 chrX_14415001 RAL-371_125b 2830 chrX 14421418 14421479 chrX 14421627 14421663 9 205 3.0 1.0 2.0 3.0 245 chrX 14421418 intron dpr8 + chrX 14421540 intron dpr8 + chrX 14421663 intron dpr8 + chrX_9_14420001 chrX_14420001 RAL-371_125b 2831 chrX 14484929 14484981 chrX 14485068 14485120 10 137 0.0 2.5 1.2 4.5 191 chrX 14484929 intergenic not near genes chrX 14485024 intergenic not near genes chrX 14485120 intergenic not near genes chrX_10_14485001 chrX_14485001 RAL-371_125b 2832 chrX 14560251 14560295 chrX 14560375 14560429 7 133 0.5 1.0 0.8 3.9 178 chrX 14560251 intergenic not near genes chrX 14560340 intergenic not near genes chrX 14560429 intergenic not near genes chrX_7_14560001 chrX_14560001 RAL-371_125b 2833 chrX 14636449 14636475 chrX 14641940 14641955 I-element 5 5485 3.0 4.5 3.8 1.0 5506 chrX 14636449 intron NetA - chrX 14639202 intron NetA - chrX 14641955 intron NetA - chrX_5_14635001 chrX_14635001 RAL-371_125b 2834 chrX 14777999 14778048 chrX 14782846 14782895 Doc 6 4846 2.0 4.0 3.0 1.5 4896 chrX 14777999 intergenic CG5347 + chrX 14780447 intergenic not near genes chrX 14782895 intergenic Ag5r2 - chrX_6_14780001 chrX_14780001 RAL-371_125b 2835 chrX 14818717 14818786 chrX 14823971 14824040 copia 12 5245 5.0 2.5 3.8 2.5 5323 chrX 14818717 intron rut - chrX 14821378 intron rut - chrX 14824040 intron rut - chrX_12_14820001 chrX_14820001 RAL-371_125b 2836 chrX 14900030 14900039 chrX 14900167 14900176 4 137 6.5 0.0 3.2 1.0 146 chrX 14900030 intron Flo2 + chrX 14900103 intron Flo2 + chrX 14900176 intron Flo2 + chrX_4_14900001 chrX_14900001 RAL-371_125b 2837 chrX 14936823 14936878 chrX 14946130 14946185 roo 14 9307 1.5 2.0 1.8 5.0 9362 chrX 14936823 intron pdgy - chrX 14941504 intron pdgy - chrX 14946185 intron pdgy - chrX_14_14940001 chrX_14940001 RAL-371_125b 2838 chrX 14950024 14950081 chrX 14950151 14950208 4 127 3.0 0.0 1.5 1.6 184 chrX 14950024 intron pdgy - chrX 14950116 intron pdgy - chrX 14950208 intron pdgy - chrX_4_14950001 chrX_14950001 RAL-371_125b 2839 chrX 14968035 14968100 chrX 14968164 14968229 7 129 0.0 2.5 1.2 3.2 194 chrX 14968035 intron eag + chrX 14968132 intron eag + chrX 14968229 intron eag + chrX_7_14965001 chrX_14965001 RAL-371_125b 2840 chrX 14981682 14981733 chrX 14981811 14981862 6 129 0.0 3.5 1.8 2.1 180 chrX 14981682 intron eag + chrX 14981772 intron eag + chrX 14981862 intron eag + chrX_6_14980001 chrX_14980001 RAL-371_125b 2841 chrX 15059130 15059159 chrX 15059286 15059315 5 156 5.0 1.0 3.0 1.2 185 chrX 15059130 exon hiw - chrX 15059222 intron hiw - chrX 15059315 intron hiw - chrX_5_15055001 chrX_15055001 RAL-371_125b 2842 chrX 15110588 15110633 chrX 15110718 15110763 7 129 5.0 3.0 4.0 1.4 175 chrX 15110588 exon Rab3-GEF + chrX 15110676 intron Rab3-GEF + chrX 15110763 intron Rab3-GEF + chrX_7_15110001 chrX_15110001 RAL-371_125b 2843 chrX 15127194 15127237 chrX 15127336 15127379 8 142 2.5 5.5 4.0 1.6 185 chrX 15127194 intron drd + chrX 15127286 intron drd + chrX 15127379 intron drd + chrX_8_15125001 chrX_15125001 RAL-371_125b 2844 chrX 15200596 15200640 chrX 15200722 15200766 9 125 0.5 2.0 1.2 4.1 170 chrX 15200596 intergenic not near genes chrX 15200681 intergenic not near genes chrX 15200766 intergenic not near genes chrX_9_15200001 chrX_15200001 RAL-371_125b 2845 chrX 15228476 15228518 chrX 15228772 15228814 5 296 2.0 5.5 3.8 1.0 338 chrX 15228476 intergenic CG9101 - chrX 15228645 intergenic CG9101 - chrX 15228814 3` UTR CG9101 - chrX_5_15225001 chrX_15225001 RAL-371_125b 2846 chrX 15265836 15265861 chrX 15265969 15265994 5 128 3.0 2.0 2.5 1.4 158 chrX 15265836 intergenic not near genes chrX 15265915 intergenic not near genes chrX 15265994 intergenic not near genes chrX_5_15265001 chrX_15265001 RAL-371_125b 2847 chrX 15268830 15268886 chrX 15268960 15269017 5 124 4.0 3.0 3.5 1.1 187 chrX 15268830 intergenic not near genes chrX 15268924 intergenic not near genes chrX 15269017 intergenic not near genes chrX_5_15265001 chrX_15265001 RAL-371_125b 2848 chrX 15326686 15326712 chrX 15326934 15326960 I-element 6 247 0.0 1.5 0.8 3.3 274 chrX 15326686 3` UTR Top1 + chrX 15326823 3` UTR Top1 + chrX 15326960 3` UTR Top1 + chrX_6_15325001 chrX_15325001 RAL-371_125b 2849 chrX 15413018 15413079 chrX 15417370 15417416 Juan 16 4349 3.5 3.0 3.2 3.8 4398 chrX 15413018 intron Cngl - chrX 15415217 intron Cngl - chrX 15417416 intron Cngl - chrX_16_15415001 chrX_15415001 RAL-371_125b 2850 chrX 15536660 15536702 chrX 15536787 15536829 9 121 7.0 5.5 6.2 1.2 169 chrX 15536660 intron Ac13E - chrX 15536744 intron Ac13E - chrX 15536829 intron Ac13E - chrX_9_15535001 chrX_15535001 RAL-371_125b 2851 chrX 15677986 15678061 chrX 15678114 15678139 10 121 2.0 3.0 2.5 2.9 153 chrX 15677986 intergenic CG12708 + chrX 15678062 intergenic CG12708 + chrX 15678139 intergenic CG12708 + chrX_10_15675001 chrX_15675001 RAL-371_125b 2852 chrX 15902532 15902549 chrX 15902655 15902678 4 128 4.5 2.5 3.5 0.9 146 chrX 15902532 intron shi + chrX 15902605 intron shi + chrX 15902678 intron shi + chrX_4_15900001 chrX_15900001 RAL-371_125b 2853 chrX 16100516 16100589 chrX 16100639 16100713 5 127 1.0 2.0 1.5 2.0 197 chrX 16100516 intron,intron CG42353 -,CG42354 - chrX 16100614 intron,intron CG42353 -,CG42354 - chrX 16100713 intron,intron CG42353 -,CG42354 - chrX_5_16100001 chrX_16100001 RAL-371_125b 2854 chrX 16160252 16160295 chrX 16160378 16160421 5 126 2.5 1.0 1.8 1.8 169 chrX 16160252 intergenic not near genes chrX 16160336 intergenic not near genes chrX 16160421 intergenic not near genes chrX_5_16160001 chrX_16160001 RAL-371_125b 2855 chrX 16222765 16222801 chrX 16231165 16231201 roo 5 8400 0.5 2.5 1.5 2.0 8436 chrX 16222765 intergenic not near genes chrX 16226983 intergenic not near genes chrX 16231201 intergenic not near genes chrX_5_16225001 chrX_16225001 RAL-371_125b 2856 chrX 16340623 16340691 chrX 16349830 16349898 roo 11 9205 2.5 4.0 3.2 2.6 9275 chrX 16340623 3` UTR Dsp1 + chrX 16345260 intergenic not near genes chrX 16349898 intergenic sl + chrX_11_16345001 chrX_16345001 RAL-371_125b 2857 chrX 16404331 16404377 chrX 16404477 16404523 10 144 3.5 5.0 4.2 1.9 192 chrX 16404331 intron CG9981 - chrX 16404427 intron CG9981 - chrX 16404523 5` UTR CG9981 - chrX_10_16400001 chrX_16400001 RAL-371_125b 2858 chrX 16437571 16437639 chrX 16437708 16437761 7 135 0.5 4.5 2.5 2.0 190 chrX 16437571 3` UTR,3` UTR hang +,CG9947 - chrX 16437666 3` UTR,3` UTR hang +,CG9947 - chrX 16437761 3` UTR,3` UTR hang +,CG9947 - chrX_7_16435001 chrX_16435001 RAL-371_125b 2859 chrX 16492603 16492655 chrX 16498230 16498282 mdg3 12 5627 4.0 3.5 3.8 2.5 5679 chrX 16492603 intron para - chrX 16495442 intron para - chrX 16498282 exon para - chrX_12_16495001 chrX_16495001 RAL-371_125b 2860 chrX 16529352 16529436 chrX 16529521 16529597 12 165 0.0 3.5 1.8 4.3 245 chrX 16529352 intron para - chrX 16529474 intron para - chrX 16529597 intron para - chrX_12_16525001 chrX_16525001 RAL-371_125b 2861 chrX 16554450 16554493 chrX 16554593 16554636 9 143 6.5 4.5 5.5 1.4 186 chrX 16554450 intergenic Pp2B-14D -,Arp2 - chrX 16554543 intergenic Pp2B-14D - chrX 16554636 3` UTR Pp2B-14D - chrX_9_16550001 chrX_16550001 RAL-371_125b 2862 chrX 16570828 16570900 chrX 16570958 16571030 8 128 3.5 0.0 1.8 2.9 202 chrX 16570828 intron CanA-14F - chrX 16570929 intron CanA-14F - chrX 16571030 intron CanA-14F - chrX_8_16570001 chrX_16570001 RAL-371_125b 2863 chrX 16622242 16622286 chrX 16622370 16622414 4 126 1.0 0.5 0.8 2.2 172 chrX 16622242 intergenic not near genes chrX 16622328 intergenic not near genes chrX 16622414 intergenic not near genes chrX_4_16620001 chrX_16620001 RAL-371_125b 2864 chrX 16788781 16788788 chrX 16789010 16789017 4 229 5.5 2.5 4.0 0.8 236 chrX 16788781 3` UTR Sap30 + chrX 16788899 3` UTR Sap30 + chrX 16789017 3` UTR Sap30 + chrX_4_16785001 chrX_16785001 RAL-371_125b 2865 chrX 16833161 16833224 chrX 16833296 16833359 10 135 4.0 4.0 4.0 2.0 198 chrX 16833161 intron CG13004 - chrX 16833260 intron CG13004 - chrX 16833359 intron CG13004 - chrX_10_16830001 chrX_16830001 RAL-371_125b 2866 chrX 16867754 16867760 chrX 16867882 16867888 4 128 4.0 0.5 2.2 1.2 134 chrX 16867754 intron CG13003 - chrX 16867821 intron CG13003 - chrX 16867888 intron CG13003 - chrX_4_16865001 chrX_16865001 RAL-371_125b 2867 chrX 16870030 16870065 chrX 16870162 16870197 6 131 4.0 4.0 4.0 1.2 167 chrX 16870030 intron CG13003 - chrX 16870114 intron CG13003 - chrX 16870197 intron CG13003 - chrX_6_16870001 chrX_16870001 RAL-371_125b 2868 chrX 16880146 16880157 chrX 16880287 16880298 5 141 4.0 8.0 6.0 0.7 152 chrX 16880146 intergenic not near genes chrX 16880222 intergenic not near genes chrX 16880298 intergenic not near genes chrX_5_16880001 chrX_16880001 RAL-371_125b 2869 chrX 16994276 16994321 chrX 16994569 16994614 5 293 14.0 18.0 16.0 0.3 338 chrX 16994276 intron CG45002 - chrX 16994445 intron CG45002 - chrX 16994614 intron CG45002 - chrX_5_16990001 chrX_16990001 RAL-371_125b 2870 chrX 17011937 17011989 chrX 17012064 17012077 12 125 4.0 3.0 3.5 2.7 140 chrX 17011937 intron CG45002 - chrX 17012007 intron CG45002 - chrX 17012077 intron CG45002 - chrX_12_17010001 chrX_17010001 RAL-371_125b 2871 chrX 17046971 17047033 chrX 17047141 17047203 7 169 1.0 3.5 2.2 2.2 232 chrX 17046971 intron CG45002 - chrX 17047087 intron CG45002 - chrX 17047203 intron CG45002 - chrX_7_17045001 chrX_17045001 RAL-371_125b 2872 chrX 17150749 17150799 chrX 17150950 17150980 4 196 1.5 3.5 2.5 1.1 231 chrX 17150749 intergenic CG5010 +,xmas-1 - chrX 17150864 intergenic CG5010 +,xmas-1 - chrX 17150980 intergenic xmas-1 -,CG5010 + chrX_4_17150001 chrX_17150001 RAL-371_125b 2873 chrX 17195168 17195228 chrX 17200302 17200362 flea 8 5134 4.0 3.0 3.5 1.8 5194 chrX 17195168 3` UTR baz + chrX 17197765 3` UTR baz + chrX 17200362 3` UTR baz + chrX_8_17195001 chrX_17195001 RAL-371_125b 2874 chrX 17205816 17205856 chrX 17205956 17205996 8 140 2.5 4.5 3.5 1.8 180 chrX 17205816 intergenic not near genes chrX 17205906 intergenic CG32564 + chrX 17205996 intergenic CG32564 + chrX_8_17205001 chrX_17205001 RAL-371_125b 2875 chrX 17221793 17221845 chrX 17221929 17221981 5 136 1.5 4.5 3.0 1.2 188 chrX 17221793 intron CG5172 + chrX 17221887 intron CG5172 + chrX 17221981 intron CG5172 + chrX_5_17220001 chrX_17220001 RAL-371_125b 2876 chrX 17229918 17229946 chrX 17230071 17230099 5 153 5.0 4.0 4.5 0.9 181 chrX 17229918 intergenic CG10597 - chrX 17230008 intergenic CG10597 - chrX 17230099 intergenic CG10597 - chrX_5_17230001 chrX_17230001 RAL-371_125b 2877 chrX 17276592 17276663 chrX 17276729 17276800 10 132 1.0 3.5 2.2 3.1 208 chrX 17276592 intron f + chrX 17276696 intron f + chrX 17276800 intron f + chrX_10_17275001 chrX_17275001 RAL-371_125b 2878 chrX 17290038 17290085 chrX 17290164 17290211 8 126 4.5 7.0 5.8 1.2 173 chrX 17290038 intron,intron CG5445 +,Fim - chrX 17290124 intron,intron CG5445 +,Fim - chrX 17290211 intron,intron CG5445 +,Fim - chrX_8_17290001 chrX_17290001 RAL-371_125b 2879 chrX 17352547 17352615 chrX 17352691 17352768 7 150 0.0 1.5 0.8 3.9 221 chrX 17352547 intergenic not near genes chrX 17352658 intergenic not near genes chrX 17352768 intergenic not near genes chrX_7_17350001 chrX_17350001 RAL-371_125b 2880 chrX 17435731 17435752 chrX 17435857 17435878 6 126 4.5 5.0 4.8 1.0 147 chrX 17435731 intron CG12994 - chrX 17435804 intron CG12994 - chrX 17435878 intron CG12994 - chrX_6_17435001 chrX_17435001 RAL-371_125b 2881 chrX 17502308 17502330 chrX 17502438 17502460 6 130 3.5 2.5 3.0 1.5 152 chrX 17502308 intron CG43658 - chrX 17502384 intron CG43658 - chrX 17502460 intron CG43658 - chrX_6_17500001 chrX_17500001 RAL-371_125b 2882 chrX 17544964 17545008 chrX 17545096 17545140 6 132 4.0 1.5 2.8 1.6 176 chrX 17544964 intron CG43658 - chrX 17545052 intron CG43658 - chrX 17545140 intron CG43658 - chrX_6_17545001 chrX_17545001 RAL-371_125b 2883 chrX 17680892 17680917 chrX 17681019 17681030 8 124 2.0 8.5 5.2 1.3 138 chrX 17680892 intron chas - chrX 17680961 intron chas - chrX 17681030 intron chas - chrX_8_17680001 chrX_17680001 RAL-371_125b 2884 chrX 17708780 17708847 chrX 17708907 17708988 8 136 4.0 0.5 2.2 2.5 208 chrX 17708780 intron CG8173 - chrX 17708884 intron CG8173 - chrX 17708988 intron CG8173 - chrX_8_17705001 chrX_17705001 RAL-371_125b 2885 chrX 17716554 17716568 chrX 17716691 17716705 5 137 1.0 2.5 1.8 1.8 151 chrX 17716554 intron CG42684 + chrX 17716630 intron CG42684 + chrX 17716705 intron CG42684 + chrX_5_17715001 chrX_17715001 RAL-371_125b 2886 chrX 17731095 17731132 chrX 17731221 17731258 6 126 2.0 9.0 5.5 0.9 163 chrX 17731095 intron CG42684 + chrX 17731176 intron CG42684 + chrX 17731258 intron CG42684 + chrX_6_17730001 chrX_17730001 RAL-371_125b 2887 chrX 17740364 17740400 chrX 17740451 17740454 8 98 6.5 3.0 4.8 1.4 90 chrX 17740364 intron CG42684 + chrX 17740409 intron CG42684 + chrX 17740454 intron CG42684 + chrX_8_17740001 chrX_17740001 RAL-371_125b 2888 chrX 17782176 17782228 chrX 17782319 17782376 4 147 2.5 2.0 2.2 1.2 200 chrX 17782176 intergenic not near genes chrX 17782276 intergenic not near genes chrX 17782376 intergenic not near genes chrX_4_17780001 chrX_17780001 RAL-371_125b 2889 chrX 17782530 17782591 chrX 17782659 17782730 11 136 5.0 2.5 3.8 2.3 200 chrX 17782530 intergenic not near genes chrX 17782630 intergenic not near genes chrX 17782730 intergenic not near genes chrX_11_17780001 chrX_17780001 RAL-371_125b 2890 chrX 17815640 17815688 chrX 17815836 17815890 10 200 4.5 3.5 4.0 2.0 250 chrX 17815640 intergenic not near genes chrX 17815765 intergenic not near genes chrX 17815890 intergenic not near genes chrX_10_17815001 chrX_17815001 RAL-371_125b 2891 chrX 18122773 18122823 chrX 18122899 18122949 8 126 5.0 3.0 4.0 1.6 176 chrX 18122773 5` UTR CR45606 + chrX 18122861 5` UTR CR45606 + chrX 18122949 intergenic CR45606 + chrX_8_18120001 chrX_18120001 RAL-371_125b 2892 chrX 18148589 18148619 chrX 18148742 18148772 4 153 0.5 0.0 0.2 3.3 183 chrX 18148589 intergenic not near genes chrX 18148680 intergenic not near genes chrX 18148772 intergenic not near genes chrX_4_18145001 chrX_18145001 RAL-371_125b 2893 chrX 18194037 18194088 chrX 18194612 18194672 BS 14 584 1.0 4.0 2.5 4.0 635 chrX 18194037 intron Frq2 + chrX 18194354 intron Frq2 + chrX 18194672 intron Frq2 + chrX_14_18190001 chrX_18190001 RAL-371_125b 2894 chrX 18257004 18257032 chrX 18257144 18257176 4 142 3.0 5.0 4.0 0.8 172 chrX 18257004 3` UTR CR45613 - chrX 18257090 3` UTR CR45613 - chrX 18257176 3` UTR CR45613 - chrX_4_18255001 chrX_18255001 RAL-371_125b 2895 chrX 18429453 18429507 chrX 18434814 18434868 Transpac 5 5361 2.0 3.0 2.5 1.4 5415 chrX 18429453 intergenic not near genes chrX 18432160 intergenic not near genes chrX 18434868 intergenic not near genes chrX_5_18430001 chrX_18430001 RAL-371_125b 2896 chrX 18438345 18438360 chrX 18438472 18438487 5 124 1.5 2.5 2.0 1.7 142 chrX 18438345 intron CG32548 - chrX 18438416 intron CG32548 - chrX 18438487 intron CG32548 - chrX_5_18435001 chrX_18435001 RAL-371_125b 2897 chrX 18453566 18453614 chrX 18453682 18453740 7 119 9.0 8.5 8.8 0.7 174 chrX 18453566 intron CG32547 - chrX 18453653 intron CG32547 - chrX 18453740 intron CG32547 - chrX_7_18450001 chrX_18450001 RAL-371_125b 2898 chrX 18486070 18486130 chrX 18486203 18486268 23 135 3.0 2.0 2.5 6.6 198 chrX 18486070 exon psh - chrX 18486169 intron psh - chrX 18486268 intron psh - chrX_23_18485001 chrX_18485001 RAL-371_125b 2899 chrX 18490002 18490051 chrX 18490206 18490256 8 198 3.0 3.5 3.2 1.9 254 chrX 18490002 intergenic CG15046 - chrX 18490129 intergenic not near genes chrX 18490256 intergenic not near genes chrX_8_18490001 chrX_18490001 RAL-371_125b 2900 chrX 18558727 18558805 chrX 18558858 18558937 10 131 1.0 3.0 2.0 3.3 210 chrX 18558727 intron Bx + chrX 18558832 intron Bx + chrX 18558937 intron Bx + chrX_10_18555001 chrX_18555001 RAL-371_125b 2901 chrX 12946233 12946235 chrX 18572525 18572525 5 5626291 10.5 10.5 10.5 0.4 5626292 chrX 12946233 3` UTR fne + chrX 15759379 intron Graf - chrX 18572525 intergenic not near genes chrX_5_15755001 chrX_15755001 RAL-371_125b 2902 chrX 18576076 18576098 chrX 18576204 18576215 5 126 3.0 1.0 2.0 1.7 139 chrX 18576076 intergenic not near genes chrX 18576146 intergenic not near genes chrX 18576215 intergenic not near genes chrX_5_18575001 chrX_18575001 RAL-371_125b 2903 chrX 18644986 18645029 chrX 18645116 18645177 7 142 4.5 0.5 2.5 2.0 191 chrX 18644986 intron Rip11 - chrX 18645082 intron Rip11 - chrX 18645177 intron Rip11 - chrX_7_18645001 chrX_18645001 RAL-371_125b 2904 chrX 18671172 18671215 chrX 18671304 18671347 4 131 2.5 0.5 1.5 1.6 175 chrX 18671172 intergenic not near genes chrX 18671260 intergenic not near genes chrX 18671347 intergenic not near genes chrX_4_18670001 chrX_18670001 RAL-371_125b 2905 chrX 18698801 18698829 chrX 18698968 18698996 6 167 4.5 3.0 3.8 1.2 195 chrX 18698801 intergenic not near genes chrX 18698898 intergenic not near genes chrX 18698996 intergenic not near genes chrX_6_18695001 chrX_18695001 RAL-371_125b 2906 chrX 18698839 18698878 chrX 18698964 18699045 5 159 2.5 3.0 2.8 1.3 206 chrX 18698839 intergenic not near genes chrX 18698942 intergenic not near genes chrX 18699045 intergenic not near genes chrX_5_18695001 chrX_18695001 RAL-371_125b 2907 chrX 18710183 18710204 chrX 18711067 18711134 8 912 2.5 1.5 2.0 2.7 951 chrX 18710183 intron,exon CCKLR-17D1 -,Cyp308a1 + chrX 18710658 intron,exon CCKLR-17D1 -,Cyp308a1 + chrX 18711134 intron,exon CCKLR-17D1 -,Cyp308a1 + chrX_8_18710001 chrX_18710001 RAL-371_125b 2908 chrX 18896479 18896539 chrX 18896640 18896700 6 161 2.0 2.5 2.2 1.9 221 chrX 18896479 3` UTR CG7349 + chrX 18896590 intergenic CG7349 + chrX 18896700 intergenic CG7349 + chrX_6_18895001 chrX_18895001 RAL-371_125b 2909 chrX 18924417 18924436 chrX 18924544 18924557 4 125 8.5 3.0 5.8 0.6 140 chrX 18924417 intergenic not near genes chrX 18924487 intergenic not near genes chrX 18924557 intergenic not near genes chrX_4_18920001 chrX_18920001 RAL-371_125b 2910 chrX 18924438 18924472 chrX 18924530 18924598 5 108 4.0 3.5 3.8 1.0 160 chrX 18924438 intergenic not near genes chrX 18924518 intergenic not near genes chrX 18924598 intergenic not near genes chrX_5_18920001 chrX_18920001 RAL-371_125b 2911 chrX 18957028 18957048 chrX 18965734 18965753 roo 5 8709 1.0 0.0 0.5 3.3 8725 chrX 18957028 intron CG43759 + chrX 18961390 intron CG43759 + chrX 18965753 intron CG43759 + chrX_5_18960001 chrX_18960001 RAL-371_125b 2912 chrX 19084045 19084082 chrX 19084215 19084252 6 170 7.0 3.0 5.0 1.0 207 chrX 19084045 intergenic CR45503 + chrX 19084148 intergenic CR45503 + chrX 19084252 intergenic CR45503 + chrX_6_19080001 chrX_19080001 RAL-371_125b 2913 chrX 19098713 19098776 chrX 19098840 19098904 5 126 0.0 1.0 0.5 3.3 191 chrX 19098713 intergenic not near genes chrX 19098808 intergenic not near genes chrX 19098904 intergenic not near genes chrX_5_19095001 chrX_19095001 RAL-371_125b 2914 chrX 19099628 19099686 chrX 19099761 19099819 7 133 1.5 4.0 2.8 1.8 191 chrX 19099628 intergenic not near genes chrX 19099724 intergenic not near genes chrX 19099819 intergenic not near genes chrX_7_19095001 chrX_19095001 RAL-371_125b 2915 chrX 19124389 19124456 chrX 19124527 19124595 6 139 3.0 3.0 3.0 1.5 206 chrX 19124389 intergenic CG15882 - chrX 19124492 intergenic CG15882 - chrX 19124595 intergenic CG15882 -,tgy - chrX_6_19120001 chrX_19120001 RAL-371_125b 2916 chrX 19125647 19125705 chrX 19125826 19125883 16 178 3.0 4.5 3.8 3.3 236 chrX 19125647 intron tgy - chrX 19125765 intron tgy - chrX 19125883 intron tgy - chrX_16_19125001 chrX_19125001 RAL-371_125b 2917 chrX 19182013 19182040 chrX 19182175 19182202 6 162 0.5 1.5 1.0 3.0 189 chrX 19182013 3` UTR CG7453 + chrX 19182108 intergenic CG7453 + chrX 19182202 intergenic CG7453 + chrX_6_19180001 chrX_19180001 RAL-371_125b 2918 chrX 19185499 19185563 chrX 19185645 19185699 10 144 0.0 3.0 1.5 4.0 200 chrX 19185499 intron CG33253 + chrX 19185599 intron CG33253 + chrX 19185699 exon CG33253 + chrX_10_19185001 chrX_19185001 RAL-371_125b 2919 chrX 19339734 19339766 chrX 19339854 19339892 5 125 0.0 1.5 0.8 2.8 158 chrX 19339734 intron nAChRalpha7 - chrX 19339813 intron nAChRalpha7 - chrX 19339892 intron nAChRalpha7 - chrX_5_19335001 chrX_19335001 RAL-371_125b 2920 chrX 19356963 19357016 chrX 19358454 19358525 NOF 6 1506 4.5 0.0 2.2 1.9 1562 chrX 19356963 intron kek5 + chrX 19357744 intron kek5 + chrX 19358525 intron kek5 + chrX_6_19355001 chrX_19355001 RAL-371_125b 2921 chrX 19380113 19380179 chrX 19380404 19380470 pogo 7 290 4.5 6.0 5.2 1.1 357 chrX 19380113 intron kek5 + chrX 19380292 intron kek5 + chrX 19380470 intron kek5 + chrX_7_19380001 chrX_19380001 RAL-371_125b 2922 chrX 19453951 19454022 chrX 19454100 19454171 7 148 3.0 1.5 2.2 2.2 220 chrX 19453951 intron kek5 + chrX 19454061 intron kek5 + chrX 19454171 intron kek5 + chrX_7_19450001 chrX_19450001 RAL-371_125b 2923 chrX 19461103 19461161 chrX 19461249 19461307 13 144 1.5 3.5 2.5 3.7 204 chrX 19461103 intron kek5 + chrX 19461205 intron kek5 + chrX 19461307 intron kek5 + chrX_13_19460001 chrX_19460001 RAL-371_125b 2924 chrX 19472100 19472154 chrX 19472692 19472769 jockey 6 602 1.0 2.0 1.5 2.4 669 chrX 19472100 intergenic kek5 + chrX 19472434 intergenic not near genes chrX 19472769 intergenic not near genes chrX_6_19470001 chrX_19470001 RAL-371_125b 2925 chrX 19554639 19554678 chrX 19554765 19554779 5 117 6.0 7.0 6.5 0.7 140 chrX 19554639 intergenic not near genes chrX 19554709 intergenic not near genes chrX 19554779 intergenic not near genes chrX_5_19550001 chrX_19550001 RAL-371_125b 2926 chrX 19595695 19595741 chrX 19595834 19595880 8 139 2.0 0.0 1.0 4.0 185 chrX 19595695 intergenic CG14205 + chrX 19595788 intergenic CG14205 + chrX 19595880 intergenic CG14205 + chrX_8_19595001 chrX_19595001 RAL-371_125b 2927 chrX 19661983 19662044 chrX 19662256 19662316 10 273 2.5 5.5 4.0 2.0 333 chrX 19661983 intron CG14223 - chrX 19662150 intron CG14223 - chrX 19662316 intron CG14223 - chrX_10_19660001 chrX_19660001 RAL-371_125b 2928 chrX 19710040 19710096 chrX 19711861 19711932 S-element 8 1832 4.0 4.5 4.2 1.5 1892 chrX 19710040 intron meso18E - chrX 19710986 intron meso18E - chrX 19711932 intron meso18E - chrX_8_19710001 chrX_19710001 RAL-371_125b 2929 chrX 19797308 19797338 chrX 19804671 19804701 Stalker4 8 7359 3.5 1.5 2.5 2.3 7393 chrX 19797308 intergenic not near genes chrX 19801004 intergenic not near genes chrX 19804701 intergenic not near genes chrX_8_19800001 chrX_19800001 RAL-371_125b 2930 chrX 19822798 19822815 chrX 19823015 19823032 7 217 8.0 7.0 7.5 0.8 234 chrX 19822798 intergenic not near genes chrX 19822915 intergenic skpE - chrX 19823032 intergenic skpE - chrX_7_19820001 chrX_19820001 RAL-371_125b 2931 chrX 19822827 19822861 chrX 19822998 19823078 10 208 4.5 4.5 4.5 1.8 251 chrX 19822827 intergenic not near genes chrX 19822952 intergenic skpE - chrX 19823078 intergenic skpE - chrX_10_19820001 chrX_19820001 RAL-371_125b 2932 chrX 19881408 19881452 chrX 19881535 19881583 8 128 4.0 2.5 3.2 1.9 175 chrX 19881408 intron Hers + chrX 19881496 intron Hers + chrX 19881583 intron Hers + chrX_8_19880001 chrX_19880001 RAL-371_125b 2933 chrX 19883718 19883796 chrX 19883853 19883875 9 127 3.5 2.5 3.0 2.2 157 chrX 19883718 intron Hers + chrX 19883796 intron Hers + chrX 19883875 intron Hers + chrX_9_19880001 chrX_19880001 RAL-371_125b 2934 chrX 19897343 19897409 chrX 19897470 19897536 17 126 1.5 0.5 1.0 8.5 193 chrX 19897343 intron Hers + chrX 19897440 intron Hers + chrX 19897536 intron Hers + chrX_17_19895001 chrX_19895001 RAL-371_125b 2935 chrX 19962543 19962615 chrX 19962742 19962812 16 194 5.0 0.5 2.8 4.2 269 chrX 19962543 intron Nep3 + chrX 19962678 intron Nep3 + chrX 19962812 intron Nep3 + chrX_16_19960001 chrX_19960001 RAL-371_125b 2936 chrX 19971772 19971802 chrX 19971899 19971929 7 127 4.5 3.5 4.0 1.4 157 chrX 19971772 intergenic not near genes chrX 19971850 intergenic not near genes chrX 19971929 intergenic not near genes chrX_7_19970001 chrX_19970001 RAL-371_125b 2937 chrX 20041483 20041553 chrX 20041613 20041683 10 130 4.0 3.0 3.5 2.2 200 chrX 20041483 intron Dop2R - chrX 20041583 intron Dop2R - chrX 20041683 intron Dop2R - chrX_10_20040001 chrX_20040001 RAL-371_125b 2938 chrX 20067137 20067161 chrX 20067396 20067420 4 259 3.5 2.0 2.8 1.1 283 chrX 20067137 intergenic not near genes chrX 20067278 intergenic not near genes chrX 20067420 intergenic not near genes chrX_4_20065001 chrX_20065001 RAL-371_125b 2939 chrX 20069243 20069279 chrX 20069419 20069462 5 182 8.0 2.5 5.2 0.8 219 chrX 20069243 intergenic not near genes chrX 20069352 intergenic not near genes chrX 20069462 intergenic not near genes chrX_5_20065001 chrX_20065001 RAL-371_125b 2940 chrX 20124049 20124099 chrX 20124238 20124286 5 187 2.0 1.0 1.5 2.0 237 chrX 20124049 intron CG34331 + chrX 20124168 intron CG34331 + chrX 20124286 intron CG34331 + chrX_5_20120001 chrX_20120001 RAL-371_125b 2941 chrX 20132254 20132285 chrX 20132387 20132408 5 131 9.5 4.0 6.8 0.6 154 chrX 20132254 intergenic not near genes chrX 20132331 intergenic not near genes chrX 20132408 intergenic not near genes chrX_5_20130001 chrX_20130001 RAL-371_125b 2942 chrX 20144801 20144858 chrX 20145021 20145078 13 219 3.5 3.0 3.2 3.1 277 chrX 20144801 intergenic not near genes chrX 20144940 intergenic not near genes chrX 20145078 intergenic not near genes chrX_13_20140001 chrX_20140001 RAL-371_125b 2943 chrX 20263382 20263415 chrX 20263522 20263530 8 131 4.0 1.5 2.8 2.1 148 chrX 20263382 intergenic not near genes chrX 20263456 intergenic not near genes chrX 20263530 intergenic not near genes chrX_8_20260001 chrX_20260001 RAL-371_125b 2944 chrX 20263416 20263438 chrX 20263521 20263548 6 127 3.0 1.5 2.2 1.9 132 chrX 20263416 intergenic not near genes chrX 20263482 intergenic not near genes chrX 20263548 intergenic not near genes chrX_6_20260001 chrX_20260001 RAL-371_125b 2945 chrX 20269887 20269938 chrX 20270019 20270070 5 132 3.0 2.5 2.8 1.3 183 chrX 20269887 intergenic Inx6 - chrX 20269978 intergenic Inx6 - chrX 20270070 intergenic Inx6 - chrX_5_20265001 chrX_20265001 RAL-371_125b 2946 chrX 20312850 20312911 chrX 20312978 20313039 14 125 3.0 1.5 2.2 4.4 189 chrX 20312850 intron CG1504 - chrX 20312944 intron CG1504 - chrX 20313039 intron CG1504 - chrX_14_20310001 chrX_20310001 RAL-371_125b 2947 chrX 20359093 20359159 chrX 20359221 20359261 14 126 4.5 2.0 3.2 3.3 168 chrX 20359093 intergenic not near genes chrX 20359177 intergenic not near genes chrX 20359261 intergenic not near genes chrX_14_20355001 chrX_20355001 RAL-371_125b 2948 chrX 20374059 20374125 chrX 20374185 20374251 6 122 2.5 4.0 3.2 1.4 192 chrX 20374059 intergenic not near genes chrX 20374155 intergenic not near genes chrX 20374251 intergenic not near genes chrX_6_20370001 chrX_20370001 RAL-371_125b 2949 chrX 20377273 20377345 chrX 20378790 20378839 hobo 8 1512 2.5 3.5 3.0 2.0 1566 chrX 20377273 intergenic not near genes chrX 20378056 intergenic not near genes chrX 20378839 intergenic not near genes chrX_8_20375001 chrX_20375001 RAL-371_125b 2950 chrX 20383270 20383345 chrX 20383444 20383519 17 174 3.0 1.5 2.2 5.3 249 chrX 20383270 intergenic not near genes chrX 20383394 intergenic not near genes chrX 20383519 intergenic not near genes chrX_17_20380001 chrX_20380001 RAL-371_125b 2951 chrX 20383827 20383893 chrX 20383957 20384013 4 128 2.5 2.5 2.5 1.1 186 chrX 20383827 intergenic not near genes chrX 20383920 intergenic not near genes chrX 20384013 intergenic not near genes chrX_4_20380001 chrX_20380001 RAL-371_125b 2952 chrX 20384194 20384222 chrX 20384356 20384374 4 159 0.0 6.0 3.0 1.0 180 chrX 20384194 intergenic not near genes chrX 20384284 intergenic not near genes chrX 20384374 intergenic not near genes chrX_4_20380001 chrX_20380001 RAL-371_125b 2953 chrX 20426192 20426216 chrX 20428358 20428402 4 2173 24.0 20.0 22.0 0.2 2210 chrX 20426192 exon cactin + chrX 20427297 intergenic CG11710 -,CG15456 - chrX 20428402 exon CG11710 - chrX_4_20425001 chrX_20425001 RAL-371_125b 2954 chrX 20504089 20504149 chrX 20505658 20505720 transib2 10 1569 2.0 9.5 5.8 1.5 1631 chrX 20504089 intron RhoGAP19D - chrX 20504904 intron RhoGAP19D - chrX 20505720 intron RhoGAP19D - chrX_10_20500001 chrX_20500001 RAL-371_125b 2955 chrX 20531644 20531681 chrX 20531784 20531821 7 140 1.5 3.5 2.5 2.0 177 chrX 20531644 intergenic not near genes chrX 20531732 intergenic not near genes chrX 20531821 intergenic not near genes chrX_7_20530001 chrX_20530001 RAL-371_125b 2956 chrX 20578030 20578106 chrX 20578159 20578235 4 129 4.0 4.0 4.0 0.8 205 chrX 20578030 intergenic not near genes chrX 20578132 intergenic not near genes chrX 20578235 intergenic not near genes chrX_4_20575001 chrX_20575001 RAL-371_125b 2957 chrX 20645303 20645353 chrX 20645549 20645568 6 241 5.5 2.5 4.0 1.2 265 chrX 20645303 intergenic not near genes chrX 20645436 intergenic not near genes chrX 20645568 intergenic not near genes chrX_6_20645001 chrX_20645001 RAL-371_125b 2958 chrX 20679997 20680047 chrX 20680119 20680174 6 126 3.0 3.5 3.2 1.4 177 chrX 20679997 intergenic not near genes chrX 20680086 intergenic not near genes chrX 20680174 intergenic not near genes chrX_6_20680001 chrX_20680001 RAL-371_125b 2959 chrX 20704161 20704181 chrX 20704473 20704488 6 310 1.5 3.5 2.5 1.7 327 chrX 20704161 intergenic not near genes chrX 20704324 intergenic not near genes chrX 20704488 intergenic not near genes chrX_6_20700001 chrX_20700001 RAL-371_125b 2960 chrX 20770162 20770212 chrX 20770327 20770334 6 161 5.5 2.0 3.8 1.2 172 chrX 20770162 3` UTR shakB - chrX 20770248 3` UTR shakB - chrX 20770334 3` UTR shakB - chrX_6_20770001 chrX_20770001 RAL-371_125b 2961 chrX 20791512 20791570 chrX 20791662 20791720 7 149 3.0 1.5 2.2 2.2 208 chrX 20791512 intron shakB - chrX 20791616 intron shakB - chrX 20791720 intron shakB - chrX_7_20790001 chrX_20790001 RAL-371_125b 2962 chrX 20836692 20836753 chrX 20844344 20844405 roo 7 7650 3.0 3.5 3.2 1.7 7713 chrX 20836692 intron shakB - chrX 20840548 intron shakB - chrX 20844405 intron shakB - chrX_7_20840001 chrX_20840001 RAL-371_125b 2963 chrX 20915016 20915061 chrX 20915237 20915282 6 221 4.0 2.0 3.0 1.5 266 chrX 20915016 intron shakB - chrX 20915149 intron shakB - chrX 20915282 intron shakB - chrX_6_20915001 chrX_20915001 RAL-371_125b 2964 chrX 20940678 20940715 chrX 20942197 20942234 hobo 10 1519 4.5 3.5 4.0 2.0 1556 chrX 20940678 intergenic not near genes chrX 20941456 intergenic not near genes chrX 20942234 intergenic not near genes chrX_10_20940001 chrX_20940001 RAL-371_125b 2965 chrX 20974151 20974186 chrX 20974385 20974420 5 234 4.0 2.5 3.2 1.2 269 chrX 20974151 intergenic not near genes chrX 20974286 intergenic not near genes chrX 20974420 intergenic not near genes chrX_5_20970001 chrX_20970001 RAL-371_125b 2966 chrX 20980991 20981044 chrX 20981144 20981197 8 153 2.0 3.5 2.8 2.1 206 chrX 20980991 intergenic not near genes chrX 20981094 intergenic not near genes chrX 20981197 intergenic not near genes chrX_8_20980001 chrX_20980001 RAL-371_125b 2967 chrX 21042587 21042627 chrX 21045322 21045362 9 2735 15.5 21.0 18.2 0.5 2775 chrX 21042587 exon Mgstl + chrX 21043974 exon,3` UTR Mgstl +,CR44431 - chrX 21045362 intron Cbs + chrX_9_21040001 chrX_21040001 RAL-371_125b 2968 chrX 21061823 21061889 chrX 21062362 21062424 roo 5 537 2.0 3.0 2.5 1.4 601 chrX 21061823 intron bves + chrX 21062124 intron bves + chrX 21062424 intron,3` UTR bves +,CG32512 - chrX_5_21060001 chrX_21060001 RAL-371_125b 2969 chrX 21076285 21076352 chrX 21076414 21076462 8 127 2.5 0.0 1.2 3.6 177 chrX 21076285 intron bves + chrX 21076374 intron bves + chrX 21076462 intron bves + chrX_8_21075001 chrX_21075001 RAL-371_125b 2970 chrX 21077549 21077631 chrX 21077688 21077744 6 128 1.5 3.5 2.5 1.7 195 chrX 21077549 intron bves + chrX 21077646 intron bves + chrX 21077744 intron bves + chrX_6_21075001 chrX_21075001 RAL-371_125b 2971 chrX 21078721 21078774 chrX 21078849 21078902 7 124 2.0 0.0 1.0 3.5 181 chrX 21078721 intron bves + chrX 21078812 intron bves + chrX 21078902 intron bves + chrX_7_21075001 chrX_21075001 RAL-371_125b 2972 chrX 21086089 21086151 chrX 21087168 21087225 jockey 11 1076 3.5 4.0 3.8 2.3 1136 chrX 21086089 intergenic not near genes chrX 21086657 intergenic not near genes chrX 21087225 intergenic not near genes chrX_11_21085001 chrX_21085001 RAL-371_125b 2973 chrX 21087999 21088066 chrX 21088181 21088222 12 178 1.0 2.5 1.8 4.3 223 chrX 21087999 intergenic not near genes chrX 21088110 intergenic not near genes chrX 21088222 intergenic not near genes chrX_12_21085001 chrX_21085001 RAL-371_125b 2974 chrX 21241707 21241799 chrX 21241858 21241867 6 137 0.0 0.0 0.0 6.0 160 chrX 21241707 intron CG32521 - chrX 21241787 intron CG32521 - chrX 21241867 intron CG32521 - chrX_6_21240001 chrX_21240001 RAL-371_125b 2975 chrX 21253237 21253287 chrX 21253363 21253364 6 113 4.0 1.5 2.8 1.6 127 chrX 21253237 intron CG32521 - chrX 21253300 intron CG32521 - chrX 21253364 intron CG32521 - chrX_6_21250001 chrX_21250001 RAL-371_125b 2976 chrX 21268027 21268084 chrX 21268158 21268215 8 131 3.0 1.5 2.2 2.5 188 chrX 21268027 intron CG32521 - chrX 21268121 intron CG32521 - chrX 21268215 intron CG32521 - chrX_8_21265001 chrX_21265001 RAL-371_125b 2977 chrX 21308823 21308873 chrX 21308979 21309049 7 159 3.5 0.0 1.8 2.5 226 chrX 21308823 exon CG1801 - chrX 21308936 intron CG1801 - chrX 21309049 intron CG1801 - chrX_7_21305001 chrX_21305001 RAL-371_125b 2978 chrX 21328080 21328118 chrX 21328241 21328247 7 154 3.0 3.0 3.0 1.8 167 chrX 21328080 3` UTR CG1486 + chrX 21328164 intergenic CG1486 +,tty - chrX 21328247 intergenic CG1486 +,tty - chrX_7_21325001 chrX_21325001 RAL-371_125b 2979 chrX 21358027 21358083 chrX 21358157 21358213 9 129 4.0 1.5 2.8 2.4 186 chrX 21358027 intergenic sol +,Sep1 + chrX 21358120 intergenic Sep1 +,sol + chrX 21358213 intergenic Sep1 +,sol + chrX_9_21355001 chrX_21355001 RAL-371_125b 2980 chrX 21414353 21414370 chrX 21414449 21414496 5 113 5.0 3.0 4.0 1.0 143 chrX 21414353 intergenic not near genes chrX 21414424 intergenic not near genes chrX 21414496 intergenic not near genes chrX_5_21410001 chrX_21410001 RAL-371_125b 2981 chrX 21419672 21419723 chrX 21419795 21419862 9 132 4.5 4.0 4.2 1.7 190 chrX 21419672 intergenic not near genes chrX 21419767 intergenic not near genes chrX 21419862 intergenic not near genes chrX_9_21415001 chrX_21415001 RAL-371_125b 2982 chrX 21428295 21428361 chrX 21428535 21428601 9 240 1.5 1.5 1.5 3.6 306 chrX 21428295 intron CG42343 - chrX 21428448 intron CG42343 - chrX 21428601 intron CG42343 - chrX_9_21425001 chrX_21425001 RAL-371_125b 2983 chrX 21458646 21458703 chrX 21464132 21464185 Ivk 5 5483 6.0 2.0 4.0 1.0 5539 chrX 21458646 intergenic not near genes chrX 21461416 intergenic not near genes chrX 21464185 intergenic not near genes chrX_5_21460001 chrX_21460001 RAL-371_125b 2984 chrX 21466979 21467043 chrX 21467112 21467177 6 132 1.5 2.0 1.8 2.1 198 chrX 21466979 intergenic CR45507 - chrX 21467078 intergenic CR45507 - chrX 21467177 3` UTR CR45507 - chrX_6_21465001 chrX_21465001 RAL-371_125b 2985 chrX 21474364 21474419 chrX 21474780 21474835 1731 6 416 2.5 1.5 2.0 2.0 471 chrX 21474364 intergenic not near genes chrX 21474600 intergenic not near genes chrX 21474835 intergenic not near genes chrX_6_21470001 chrX_21470001 RAL-371_125b 2986 chrX 21516947 21517006 chrX 21517076 21517135 11 127 3.0 2.5 2.8 2.9 188 chrX 21516947 intron CR45082 - chrX 21517041 intron CR45082 - chrX 21517135 intron CR45082 - chrX_11_21515001 chrX_21515001 RAL-371_125b 2987 chrX 21565396 21565432 chrX 21565524 21565555 4 127 3.5 5.5 4.5 0.7 159 chrX 21565396 intergenic not near genes chrX 21565476 intergenic not near genes chrX 21565555 intergenic not near genes chrX_4_21565001 chrX_21565001 RAL-371_125b 2988 chrX 21581507 21581559 chrX 21581638 21581690 7 131 1.0 0.0 0.5 4.7 183 chrX 21581507 intergenic not near genes chrX 21581598 intergenic not near genes chrX 21581690 intergenic not near genes chrX_7_21580001 chrX_21580001 RAL-371_125b 2989 chrX 21668233 21668288 chrX 21668368 21668423 12 135 1.0 1.5 1.2 5.5 190 chrX 21668233 intergenic not near genes chrX 21668328 intergenic not near genes chrX 21668423 intergenic not near genes chrX_12_21665001 chrX_21665001 RAL-371_125b 2990 chrX 22574773 22574821 chrX 22575058 22575106 6 285 3.0 1.0 2.0 2.0 333 chrX 22574773 intergenic not near genes chrX 22574940 intergenic not near genes chrX 22575106 intergenic not near genes chrX_6_22570001 chrX_22570001 RAL-371_125b 2991 chrX 22660560 22660602 chrX 22660655 22660736 9 130 3.0 3.0 3.0 2.2 176 chrX 22660560 intron CR44997 + chrX 22660648 intron CR44997 + chrX 22660736 intron CR44997 + chrX_9_22660001 chrX_22660001 RAL-371_125b 2992 chrX 22696984 22697045 chrX 22697150 22697211 7 166 2.0 2.0 2.0 2.3 227 chrX 22696984 intron CR44997 + chrX 22697098 intron CR44997 + chrX 22697211 intron CR44997 + chrX_7_22695001 chrX_22695001 RAL-371_125b 2993 chrX 22697476 22697509 chrX 22701823 22701856 Juan 7 4347 4.0 5.0 4.5 1.3 4380 chrX 22697476 intron CR44997 + chrX 22699666 intron CR44997 + chrX 22701856 intron CR44997 + chrX_7_22695001 chrX_22695001 RAL-371_125b 2994 chrX 22764335 22764395 chrX 22764481 22764536 7 144 4.5 3.0 3.8 1.5 201 chrX 22764335 intron CR44997 + chrX 22764436 intron CR44997 + chrX 22764536 intron,3` UTR CR44997 +,CR44109 - chrX_7_22760001 chrX_22760001 RAL-371_125b 2995 chrX 22771466 22771530 chrX 22774807 22774871 297 9 3340 4.0 2.5 3.2 2.1 3405 chrX 22771466 intron CR44997 + chrX 22773168 intron CR44997 + chrX 22774871 intron CR44997 + chrX_9_22770001 chrX_22770001 RAL-371_125b 2996 chrX 22798737 22798798 chrX 22798904 22798960 7 165 0.5 3.0 1.8 2.5 223 chrX 22798737 intergenic not near genes chrX 22798848 intergenic not near genes chrX 22798960 intergenic not near genes chrX_7_22795001 chrX_22795001 RAL-371_125b 2997 chrX 22811971 22811996 chrX 22816783 22816819 F-element 5 4821 5.0 4.5 4.8 0.9 4848 chrX 22811971 intergenic CG12446 - chrX 22814395 intergenic not near genes chrX 22816819 intergenic not near genes chrX_5_22810001 chrX_22810001 RAL-371_125b 2998 chrX 22824220 22824440 chrX 22824396 22824623 12 180 0.0 0.0 0.0 12.0 403 chrX 22824220 intergenic fog - chrX 22824422 3` UTR fog - chrX 22824623 3` UTR fog - chrX_12_22820001 chrX_22820001 RAL-371_125b 2999 chrX 22844490 22844526 chrX 22844627 22844663 10 136 4.0 1.5 2.8 2.6 173 chrX 22844490 intron,intron fog -,CG42346 + chrX 22844576 intron,intron fog -,CG42346 + chrX 22844663 intron,intron fog -,CG42346 + chrX_10_22840001 chrX_22840001 RAL-371_125b 3000 chrX 22922470 22922527 chrX 22922600 22922647 6 127 0.5 3.0 1.8 2.1 177 chrX 22922470 intergenic not near genes chrX 22922558 intergenic not near genes chrX 22922647 intergenic not near genes chrX_6_22920001 chrX_22920001 RAL-371_125b 3001 chrX 22967352 22967357 chrX 23154553 23154558 diver 4 187201 5.0 9.0 7.0 0.5 187206 chrX 22967352 intergenic not near genes chrX 23060955 intergenic not near genes chrX 23154558 intergenic not near genes chrX_4_23060001 chrX_23060001 RAL-371_125b 3002 chrX 22987092 22987104 chrX 22989765 22989813 Burdock 8 2701 5.0 1.5 3.2 1.9 2721 chrX 22987092 intron,intron stnA -,stnB - chrX 22988452 intron,intron stnA -,stnB - chrX 22989813 intron,intron stnA -,stnB - chrX_8_22985001 chrX_22985001 RAL-371_125b 3003 chrX 22992349 22992418 chrX 22992530 22992599 11 181 3.0 3.0 3.0 2.8 250 chrX 22992349 intron,intron stnA -,stnB - chrX 22992474 intron,intron stnA -,stnB - chrX 22992599 3` UTR,exon stnA -,stnB - chrX_11_22990001 chrX_22990001 RAL-371_125b 3004 chrX 22996267 22996332 chrX 23003549 23003614 roo 15 7282 3.5 3.0 3.2 3.6 7347 chrX 22996267 intron,intron stnA -,stnB - chrX 22999940 intron,intron stnA -,stnB - chrX 23003614 intron,intron stnA -,stnB - chrX_15_22995001 chrX_22995001 RAL-371_125b 3005 chrX 23036355 23036399 chrX 23037806 23037850 pogo 5 1451 8.0 2.5 5.2 0.8 1495 chrX 23036355 intron CG12061 + chrX 23037102 intron CG12061 + chrX 23037850 intron CG12061 + chrX_5_23035001 chrX_23035001 RAL-371_125b 3006 chrY 864674 864741 chrY 864801 864867 4 126 12.5 9.0 10.8 0.3 193 chrY 864674 intergenic not near genes chrY 864770 intergenic not near genes chrY 864867 intergenic not near genes chrY_4_860001 chrY_860001 RAL-371_125b 3007 chrY 975601 975816 chrY 975768 975973 12 150 109.5 103.5 106.5 0.1 372 chrY 975601 intergenic not near genes chrY 975787 intergenic not near genes chrY 975973 intergenic not near genes chrY_12_975001 chrY_975001 RAL-371_125b 3008 chrY 1419854 1419891 chrY 1420158 1420184 5 302 8.0 5.5 6.8 0.6 330 chrY 1419854 intergenic not near genes chrY 1420019 intergenic not near genes chrY 1420184 intergenic not near genes chrY_5_1420001 chrY_1420001 RAL-371_125b 3009 chrY 1445420 1445436 chrY 1447400 1447416 6 1977 10.5 9.0 9.8 0.6 1996 chrY 1445420 intergenic not near genes chrY 1446418 intergenic not near genes chrY 1447416 intergenic not near genes chrY_6_1445001 chrY_1445001 RAL-371_125b