SV# Chr_5p Chr_coord_5p_start Chr_coord_5p_end Chr_3p Chr_coord_3p_start Chr_coord_3p_end repName Reads_collapsed avg_del_len RefGen_3prime Refgen_5prime RefGen_Avg Coverage_Ratio size Chr_5p Chr_coord_5p classification_5p comment_5p Chr_mid Chr_coord_mid classification_mid comment_mid Chr_3p Chr_coord_3p classification_3p comment_3p depletion_code loci_code libname 1 chr2L 47447 47488 chr2L 52571 52612 jockey 12 5124 8.0 9.5 8.8 1.2 5165 chr2L 47447 intron Cda5 - chr2L 50030 intron Cda5 - chr2L 52612 intron Cda5 - chr2L_12_50001 chr2L_50001 RAL-370 2 chr2L 263300 263314 chr2L 263452 263480 4 162 0.0 7.5 3.8 0.8 180 chr2L 263300 intron,3` UTR CG3645 -,CG17075 - chr2L 263390 intron,3` UTR CG3645 -,CG17075 - chr2L 263480 intron,3` UTR CG3645 -,CG17075 - chr2L_4_260001 chr2L_260001 RAL-370 3 chr2L 297676 297718 chr2L 297785 297837 17 115 2.0 3.5 2.8 4.5 161 chr2L 297676 intergenic Pi3K21B +,Hop + chr2L 297756 intergenic Pi3K21B +,Hop + chr2L 297837 intergenic Pi3K21B +,Hop + chr2L_17_295001 chr2L_295001 RAL-370 4 chr2L 323433 323483 chr2L 323531 323578 23 92 5.0 4.0 4.5 4.2 145 chr2L 323433 intron Plc21C + chr2L 323506 intron Plc21C + chr2L 323578 intron Plc21C + chr2L_23_320001 chr2L_320001 RAL-370 5 chr2L 325119 325150 chr2L 325207 325233 6 90 5.0 4.5 4.8 1.0 114 chr2L 325119 intron Plc21C + chr2L 325176 intron Plc21C + chr2L 325233 intron Plc21C + chr2L_6_325001 chr2L_325001 RAL-370 6 chr2L 347865 347918 chr2L 355385 355438 blood 13 7516 2.5 2.5 2.5 3.7 7573 chr2L 347865 3` UTR Plc21C + chr2L 351652 intron Plc21C + chr2L 355438 3` UTR Plc21C + chr2L_13_350001 chr2L_350001 RAL-370 7 chr2L 371423 371456 chr2L 371522 371555 7 99 4.0 5.5 4.8 1.2 132 chr2L 371423 intergenic not near genes chr2L 371489 intergenic not near genes chr2L 371555 intergenic not near genes chr2L_7_370001 chr2L_370001 RAL-370 8 chr2L 407934 407973 chr2L 408034 408074 7 99 4.5 4.5 4.5 1.3 140 chr2L 407934 3` UTR RpI135 + chr2L 408004 intergenic AP-2alpha -,RpI135 + chr2L 408074 3` UTR AP-2alpha - chr2L_7_405001 chr2L_405001 RAL-370 9 chr2L 489513 489565 chr2L 489618 489654 11 98 3.0 6.0 4.5 2.0 141 chr2L 489513 intron ush + chr2L 489584 intron ush + chr2L 489654 intron ush + chr2L_11_485001 chr2L_485001 RAL-370 10 chr2L 597382 597392 chr2L 597816 597823 5 430 8.5 4.5 6.5 0.7 441 chr2L 597382 intergenic not near genes chr2L 597602 intergenic not near genes chr2L 597823 intergenic not near genes chr2L_5_595001 chr2L_595001 RAL-370 11 chr2L 597409 597431 chr2L 597809 597829 7 415 2.0 4.0 3.0 1.8 420 chr2L 597409 intergenic not near genes chr2L 597619 intergenic not near genes chr2L 597829 intergenic not near genes chr2L_7_595001 chr2L_595001 RAL-370 12 chr2L 609307 609325 chr2L 609420 609445 6 118 2.5 8.5 5.5 0.9 138 chr2L 609307 intergenic CR43649 - chr2L 609376 intergenic CR43649 - chr2L 609445 intergenic CR43649 - chr2L_6_605001 chr2L_605001 RAL-370 13 chr2L 686913 686940 chr2L 695970 696000 roo 8 9059 2.5 6.5 4.5 1.5 9087 chr2L 686913 intron ds - chr2L 691456 intron ds - chr2L 696000 intron ds - chr2L_8_690001 chr2L_690001 RAL-370 14 chr2L 764543 764591 chr2L 764643 764692 13 98 1.5 1.0 1.2 5.9 149 chr2L 764543 intergenic not near genes chr2L 764618 intergenic not near genes chr2L 764692 intergenic not near genes chr2L_13_760001 chr2L_760001 RAL-370 15 chr2L 770472 770481 chr2L 772251 772281 Bari1 4 1783 9.0 6.0 7.5 0.5 1809 chr2L 770472 intergenic not near genes chr2L 771376 intergenic not near genes chr2L 772281 intergenic CR44614 + chr2L_4_770001 chr2L_770001 RAL-370 16 chr2L 791433 791470 chr2L 791545 791567 13 112 4.5 0.5 2.5 3.7 134 chr2L 791433 intergenic not near genes chr2L 791500 intergenic not near genes chr2L 791567 intergenic not near genes chr2L_13_790001 chr2L_790001 RAL-370 17 chr2L 795902 795936 chr2L 796064 796098 7 160 4.5 3.5 4.0 1.4 196 chr2L 795902 intergenic not near genes chr2L 796000 intergenic not near genes chr2L 796098 intergenic not near genes chr2L_7_795001 chr2L_795001 RAL-370 18 chr2L 795941 795952 chr2L 796062 796114 4 152 2.5 3.5 3.0 1.0 173 chr2L 795941 intergenic not near genes chr2L 796028 intergenic not near genes chr2L 796114 intergenic not near genes chr2L_4_795001 chr2L_795001 RAL-370 19 chr2L 877829 877845 chr2L 877930 877935 4 98 4.5 3.0 3.8 0.8 106 chr2L 877829 3` UTR,exon CG15824 -,ninaA + chr2L 877882 3` UTR,intron CG15824 -,ninaA + chr2L 877935 3` UTR,intron CG15824 -,ninaA + chr2L_4_875001 chr2L_875001 RAL-370 20 chr2L 877851 877871 chr2L 877921 877972 5 89 2.0 2.5 2.2 1.6 121 chr2L 877851 3` UTR,exon CG15824 -,ninaA + chr2L 877912 3` UTR,intron CG15824 -,ninaA + chr2L 877972 3` UTR,exon CG15824 -,ninaA + chr2L_5_875001 chr2L_875001 RAL-370 21 chr2L 927857 927885 chr2L 928012 928036 5 164 3.5 4.5 4.0 1.0 179 chr2L 927857 intron CG4341 + chr2L 927946 intron CG4341 + chr2L 928036 intron CG4341 + chr2L_5_925001 chr2L_925001 RAL-370 22 chr2L 976731 976778 chr2L 976828 976874 11 96 2.0 1.5 1.8 3.9 143 chr2L 976731 intergenic not near genes chr2L 976802 intergenic not near genes chr2L 976874 intergenic not near genes chr2L_11_975001 chr2L_975001 RAL-370 23 chr2L 976858 976889 chr2L 984514 984545 roo 13 7656 1.5 0.5 1.0 6.5 7687 chr2L 976858 intergenic not near genes chr2L 980702 intergenic not near genes chr2L 984545 intergenic not near genes chr2L_13_980001 chr2L_980001 RAL-370 24 chr2L 996702 996747 chr2L 1005817 1005862 roo 9 9115 0.0 3.5 1.8 3.2 9160 chr2L 996702 intergenic not near genes chr2L 1001282 intergenic not near genes chr2L 1005862 intergenic not near genes chr2L_9_1000001 chr2L_1000001 RAL-370 25 chr2L 1045216 1045247 chr2L 1045300 1045346 12 94 5.0 7.5 6.2 1.7 130 chr2L 1045216 intron IA-2 - chr2L 1045281 intron IA-2 - chr2L 1045346 intron IA-2 - chr2L_12_1045001 chr2L_1045001 RAL-370 26 chr2L 1094235 1094263 chr2L 1094331 1094359 8 96 5.5 0.0 2.8 2.1 124 chr2L 1094235 intron CG4629 - chr2L 1094297 intron CG4629 - chr2L 1094359 intron CG4629 - chr2L_8_1090001 chr2L_1090001 RAL-370 27 chr2L 1126658 1126706 chr2L 1126747 1126802 7 90 3.5 3.5 3.5 1.6 144 chr2L 1126658 intron Pino - chr2L 1126730 intron Pino - chr2L 1126802 intron Pino - chr2L_7_1125001 chr2L_1125001 RAL-370 28 chr2L 1156841 1156878 chr2L 1156966 1157001 9 124 3.5 2.0 2.8 2.4 160 chr2L 1156841 intron capt - chr2L 1156921 intron capt - chr2L 1157001 intron capt - chr2L_9_1155001 chr2L_1155001 RAL-370 29 chr2L 1220115 1220160 chr2L 1227593 1227646 blood 18 7485 4.5 2.5 3.5 4.0 7531 chr2L 1220115 intron CG42329 + chr2L 1223880 intron CG42329 + chr2L 1227646 intron CG42329 + chr2L_18_1220001 chr2L_1220001 RAL-370 30 chr2L 1261133 1261252 chr2L 1261235 1261347 10 98 0.0 0.0 0.0 10.0 214 chr2L 1261133 intron robo3 + chr2L 1261240 intron robo3 + chr2L 1261347 intron robo3 + chr2L_10_1260001 chr2L_1260001 RAL-370 31 chr2L 1367383 1367428 chr2L 1367760 1367762 4 356 6.0 1.0 3.5 0.9 379 chr2L 1367383 intergenic not near genes chr2L 1367572 intergenic CG14346 + chr2L 1367762 intergenic CG14346 + chr2L_4_1365001 chr2L_1365001 RAL-370 32 chr2L 1505764 1505812 chr2L 1505861 1505907 16 90 3.0 3.0 3.0 4.0 143 chr2L 1505764 intergenic not near genes chr2L 1505836 intergenic not near genes chr2L 1505907 intergenic not near genes chr2L_16_1505001 chr2L_1505001 RAL-370 33 chr2L 1536510 1536523 chr2L 1536628 1536673 5 142 0.0 5.0 2.5 1.4 163 chr2L 1536510 intergenic not near genes chr2L 1536592 intergenic not near genes chr2L 1536673 intergenic not near genes chr2L_5_1535001 chr2L_1535001 RAL-370 34 chr2L 1557132 1557174 chr2L 1557277 1557316 7 144 2.5 5.0 3.8 1.5 184 chr2L 1557132 intron haf + chr2L 1557224 intron haf + chr2L 1557316 intron haf + chr2L_7_1555001 chr2L_1555001 RAL-370 35 chr2L 1570679 1570717 chr2L 1573571 1573609 F-element 18 2891 1.5 5.0 3.2 4.3 2930 chr2L 1570679 intron haf + chr2L 1572144 intron haf + chr2L 1573609 intron haf + chr2L_18_1570001 chr2L_1570001 RAL-370 36 chr2L 1591862 1591893 chr2L 1591966 1591992 16 103 3.5 4.0 3.8 3.3 130 chr2L 1591862 intron haf + chr2L 1591927 intron haf + chr2L 1591992 intron haf + chr2L_16_1590001 chr2L_1590001 RAL-370 37 chr2L 1603942 1603958 chr2L 1604065 1604081 9 123 4.5 3.0 3.8 1.9 139 chr2L 1603942 intron,intron haf +,CG31935 - chr2L 1604012 intron,intron haf +,CG31935 - chr2L 1604081 intron,intron haf +,CG31935 - chr2L_9_1600001 chr2L_1600001 RAL-370 38 chr2L 1634750 1634760 chr2L 1634855 1634871 5 110 4.5 4.0 4.2 1.0 121 chr2L 1634750 intergenic not near genes chr2L 1634810 intergenic not near genes chr2L 1634871 intergenic not near genes chr2L_5_1630001 chr2L_1630001 RAL-370 39 chr2L 1678962 1679004 chr2L 1686445 1686489 blood 10 7480 4.5 7.0 5.8 1.5 7527 chr2L 1678962 intron chinmo + chr2L 1682726 intron chinmo + chr2L 1686489 intron chinmo + chr2L_10_1680001 chr2L_1680001 RAL-370 40 chr2L 1721820 1721854 chr2L 1721906 1721958 11 93 2.0 6.0 4.0 2.2 138 chr2L 1721820 intron Rim2 - chr2L 1721889 intron Rim2 - chr2L 1721958 intron Rim2 - chr2L_11_1720001 chr2L_1720001 RAL-370 41 chr2L 1724795 1724833 chr2L 1724897 1724935 9 100 2.5 5.5 4.0 1.8 140 chr2L 1724795 3` UTR Eno - chr2L 1724865 3` UTR Eno - chr2L 1724935 3` UTR Eno - chr2L_9_1720001 chr2L_1720001 RAL-370 42 chr2L 1823624 1823632 chr2L 1824201 1824209 6 577 8.5 0.0 4.2 1.2 585 chr2L 1823624 intergenic CG31933 - chr2L 1823916 intergenic CG31664 - chr2L 1824209 3` UTR CG31664 - chr2L_6_1820001 chr2L_1820001 RAL-370 43 chr2L 1856231 1856255 chr2L 1856370 1856393 8 137 4.5 3.0 3.8 1.7 162 chr2L 1856231 intron wry + chr2L 1856312 intron wry + chr2L 1856393 intron wry + chr2L_8_1855001 chr2L_1855001 RAL-370 44 chr2L 1883442 1883447 chr2L 1884015 1884046 4 593 0.0 3.5 1.8 1.4 604 chr2L 1883442 intron CG15358 - chr2L 1883744 exon CG15358 - chr2L 1884046 exon CG15358 - chr2L_4_1880001 chr2L_1880001 RAL-370 45 chr2L 1930586 1930629 chr2L 1930684 1930727 13 93 5.5 3.0 4.2 2.5 141 chr2L 1930586 intron CG7337 + chr2L 1930656 intron CG7337 + chr2L 1930727 intron CG7337 + chr2L_13_1930001 chr2L_1930001 RAL-370 46 chr2L 1993191 1993229 chr2L 1993287 1993332 14 100 2.0 5.5 3.8 2.9 141 chr2L 1993191 intergenic not near genes chr2L 1993262 intergenic not near genes chr2L 1993332 intergenic not near genes chr2L_14_1990001 chr2L_1990001 RAL-370 47 chr2L 2001769 2001798 chr2L 2001866 2001896 5 97 1.5 5.0 3.2 1.2 127 chr2L 2001769 intron,5` UTR CG33543 -,CR43464 + chr2L 2001832 intron,5` UTR CG33543 -,CR43464 + chr2L 2001896 intron,5` UTR CG33543 -,CR43464 + chr2L_5_2000001 chr2L_2000001 RAL-370 48 chr2L 2001802 2001814 chr2L 2001861 2001912 9 93 1.0 5.0 3.0 2.2 110 chr2L 2001802 intron,5` UTR CG33543 -,CR43464 + chr2L 2001857 intron,5` UTR CG33543 -,CR43464 + chr2L 2001912 intron,5` UTR CG33543 -,CR43464 + chr2L_9_2000001 chr2L_2000001 RAL-370 49 chr2L 2007833 2007871 chr2L 2007961 2007999 5 128 1.0 4.0 2.5 1.4 166 chr2L 2007833 intergenic CR45712 + chr2L 2007916 intergenic CR45712 +,Nplp4 + chr2L 2007999 intergenic CR45712 +,Nplp4 + chr2L_5_2005001 chr2L_2005001 RAL-370 50 chr2L 2049225 2049238 chr2L 2049329 2049342 7 103 0.0 12.0 6.0 1.0 117 chr2L 2049225 intergenic not near genes chr2L 2049284 intergenic not near genes chr2L 2049342 intergenic not near genes chr2L_7_2045001 chr2L_2045001 RAL-370 51 chr2L 2061179 2061227 chr2L 2061284 2061333 15 102 3.0 2.0 2.5 4.3 154 chr2L 2061179 intron dpr3 - chr2L 2061256 intron dpr3 - chr2L 2061333 intron dpr3 - chr2L_15_2060001 chr2L_2060001 RAL-370 52 chr2L 2100386 2100406 chr2L 2109539 2109555 roo 8 9162 5.5 5.0 5.2 1.3 9169 chr2L 2100386 intron dpr3 - chr2L 2104970 intron dpr3 - chr2L 2109555 intron dpr3 - chr2L_8_2100001 chr2L_2100001 RAL-370 53 chr2L 2250397 2250421 chr2L 2251184 2251196 5 785 8.5 0.5 4.5 0.9 799 chr2L 2250397 intergenic Ser12 - chr2L 2250796 exon Ser12 - chr2L 2251196 exon Ser12 - chr2L_5_2250001 chr2L_2250001 RAL-370 54 chr2L 2276573 2276612 chr2L 2278199 2278238 10 1626 24.5 21.5 23.0 0.4 1665 chr2L 2276573 intron CR43753 - chr2L 2277406 intron CR43753 - chr2L 2278238 intron CR43753 - chr2L_10_2275001 chr2L_2275001 RAL-370 55 chr2L 2276560 2276610 chr2L 2278345 2278396 17 1786 24.5 31.0 27.8 0.6 1836 chr2L 2276560 intron CR43753 - chr2L 2277478 intron CR43753 - chr2L 2278396 intron CR43753 - chr2L_17_2275001 chr2L_2275001 RAL-370 56 chr2L 2292435 2292483 chr2L 2292534 2292575 12 97 3.5 7.0 5.2 1.9 140 chr2L 2292435 intergenic not near genes chr2L 2292505 intergenic not near genes chr2L 2292575 intergenic not near genes chr2L_12_2290001 chr2L_2290001 RAL-370 57 chr2L 2372347 2372400 chr2L 2372453 2372499 8 104 0.0 4.0 2.0 2.7 152 chr2L 2372347 intergenic CG3609 - chr2L 2372423 intergenic CG3609 - chr2L 2372499 3` UTR CG3609 - chr2L_8_2370001 chr2L_2370001 RAL-370 58 chr2L 2498191 2498214 chr2L 2498289 2498314 6 99 2.0 5.0 3.5 1.3 123 chr2L 2498191 3` UTR oaf + chr2L 2498252 3` UTR oaf + chr2L 2498314 3` UTR oaf + chr2L_6_2495001 chr2L_2495001 RAL-370 59 chr2L 2504207 2504227 chr2L 2504305 2504325 4 98 1.5 6.0 3.8 0.8 118 chr2L 2504207 intergenic not near genes chr2L 2504266 intergenic not near genes chr2L 2504325 intergenic not near genes chr2L_4_2500001 chr2L_2500001 RAL-370 60 chr2L 2557813 2557847 chr2L 2557918 2557952 18 104 0.0 8.0 4.0 3.6 139 chr2L 2557813 intergenic not near genes chr2L 2557882 intergenic not near genes chr2L 2557952 intergenic not near genes chr2L_18_2555001 chr2L_2555001 RAL-370 61 chr2L 2565536 2565563 chr2L 2571629 2571656 297 8 6093 1.5 5.5 3.5 1.8 6120 chr2L 2565536 exon Cyp309a2 - chr2L 2568596 intron Cyp309a2 - chr2L 2571656 exon Cyp309a2 - chr2L_8_2565001 chr2L_2565001 RAL-370 62 chr2L 2587801 2587834 chr2L 2587897 2587932 5 90 1.5 2.5 2.0 1.7 131 chr2L 2587801 intergenic not near genes chr2L 2587866 intergenic not near genes chr2L 2587932 intergenic not near genes chr2L_5_2585001 chr2L_2585001 RAL-370 63 chr2L 2618015 2618069 chr2L 2618114 2618167 17 98 2.0 0.0 1.0 8.5 152 chr2L 2618015 intergenic not near genes chr2L 2618091 intergenic not near genes chr2L 2618167 intergenic not near genes chr2L_17_2615001 chr2L_2615001 RAL-370 64 chr2L 2620637 2620650 chr2L 2620758 2620775 4 124 0.0 7.5 3.8 0.8 138 chr2L 2620637 3` UTR CG43403 + chr2L 2620706 3` UTR CG43403 + chr2L 2620775 3` UTR CG43403 + chr2L_4_2620001 chr2L_2620001 RAL-370 65 chr2L 2667610 2667628 chr2L 2667708 2667726 9 98 7.0 5.0 6.0 1.3 116 chr2L 2667610 intergenic not near genes chr2L 2667668 intergenic not near genes chr2L 2667726 intergenic not near genes chr2L_9_2665001 chr2L_2665001 RAL-370 66 chr2L 2667630 2667652 chr2L 2667707 2667749 8 91 5.5 5.0 5.2 1.3 119 chr2L 2667630 intergenic not near genes chr2L 2667690 intergenic not near genes chr2L 2667749 intergenic not near genes chr2L_8_2665001 chr2L_2665001 RAL-370 67 chr2L 2725155 2725166 chr2L 2725254 2725263 5 99 5.0 11.0 8.0 0.6 108 chr2L 2725155 intergenic not near genes chr2L 2725209 intergenic CG31689 + chr2L 2725263 intergenic CG31689 + chr2L_5_2725001 chr2L_2725001 RAL-370 68 chr2L 2734513 2734532 chr2L 2734611 2734630 6 98 1.5 8.0 4.8 1.0 117 chr2L 2734513 intron CG31689 + chr2L 2734572 intron CG31689 + chr2L 2734630 intron CG31689 + chr2L_6_2730001 chr2L_2730001 RAL-370 69 chr2L 2793930 2793971 chr2L 2794023 2794026 12 91 3.0 1.5 2.2 3.8 96 chr2L 2793930 intron Syt1 - chr2L 2793978 intron Syt1 - chr2L 2794026 intron Syt1 - chr2L_12_2790001 chr2L_2790001 RAL-370 70 chr2L 2800588 2800615 chr2L 2800691 2800711 4 101 1.0 0.0 0.5 2.7 123 chr2L 2800588 intergenic not near genes chr2L 2800650 intergenic not near genes chr2L 2800711 intergenic not near genes chr2L_4_2800001 chr2L_2800001 RAL-370 71 chr2L 2826537 2826574 chr2L 2826648 2826678 8 107 0.5 5.5 3.0 2.0 141 chr2L 2826537 intron Duox - chr2L 2826608 intron Duox - chr2L 2826678 intron Duox - chr2L_8_2825001 chr2L_2825001 RAL-370 72 chr2L 2831065 2831088 chr2L 2831191 2831191 7 122 1.0 0.0 0.5 4.7 126 chr2L 2831065 intergenic not near genes chr2L 2831128 intergenic not near genes chr2L 2831191 intergenic not near genes chr2L_7_2830001 chr2L_2830001 RAL-370 73 chr2L 2834727 2834779 chr2L 2834827 2834880 13 100 2.5 0.0 1.2 5.9 153 chr2L 2834727 intergenic CG3119 - chr2L 2834804 intergenic CG3119 - chr2L 2834880 intergenic CG3119 - chr2L_13_2830001 chr2L_2830001 RAL-370 74 chr2L 2857800 2857833 chr2L 2857896 2857929 4 96 0.0 2.5 1.2 1.8 129 chr2L 2857800 intron CG2991 + chr2L 2857864 intron CG2991 + chr2L 2857929 intron CG2991 + chr2L_4_2855001 chr2L_2855001 RAL-370 75 chr2L 2895676 2895693 chr2L 2895780 2895795 6 102 5.0 0.0 2.5 1.7 119 chr2L 2895676 intron lilli + chr2L 2895736 intron lilli + chr2L 2895795 intron lilli + chr2L_6_2895001 chr2L_2895001 RAL-370 76 chr2L 2895698 2895717 chr2L 2895773 2895783 5 90 2.5 0.0 1.2 2.3 85 chr2L 2895698 intron lilli + chr2L 2895740 intron lilli + chr2L 2895783 intron lilli + chr2L_5_2895001 chr2L_2895001 RAL-370 77 chr2L 2911151 2911192 chr2L 2911420 2911450 12 264 4.0 3.0 3.5 2.7 299 chr2L 2911151 intron lilli + chr2L 2911300 intron lilli + chr2L 2911450 intron lilli + chr2L_12_2910001 chr2L_2910001 RAL-370 78 chr2L 2933291 2933332 chr2L 2935487 2935529 pogo 11 2195 6.0 8.5 7.2 1.3 2238 chr2L 2933291 intron lilli + chr2L 2934410 intron lilli + chr2L 2935529 intron lilli + chr2L_11_2930001 chr2L_2930001 RAL-370 79 chr2L 3073014 3073058 chr2L 3078237 3078281 copia 13 5223 3.0 8.0 5.5 2.0 5267 chr2L 3073014 intron toc - chr2L 3075648 intron toc - chr2L 3078281 intron toc - chr2L_13_3075001 chr2L_3075001 RAL-370 80 chr2L 3108858 3108892 chr2L 3108948 3108989 7 96 3.0 5.0 4.0 1.4 131 chr2L 3108858 exon toc - chr2L 3108924 intron toc - chr2L 3108989 intron toc - chr2L_7_3105001 chr2L_3105001 RAL-370 81 chr2L 3113416 3113446 chr2L 3113531 3113560 8 111 0.0 5.5 2.8 2.1 144 chr2L 3113416 intron toc - chr2L 3113488 intron toc - chr2L 3113560 intron toc - chr2L_8_3110001 chr2L_3110001 RAL-370 82 chr2L 3134278 3134293 chr2L 3134374 3134387 6 96 2.5 15.5 9.0 0.6 109 chr2L 3134278 intron toc - chr2L 3134332 intron toc - chr2L 3134387 intron toc - chr2L_6_3130001 chr2L_3130001 RAL-370 83 chr2L 3137075 3137119 chr2L 3137695 3137739 11 619 4.0 7.0 5.5 1.7 664 chr2L 3137075 intron toc - chr2L 3137407 intron toc - chr2L 3137739 intron toc - chr2L_11_3135001 chr2L_3135001 RAL-370 84 chr2L 3147255 3147306 chr2L 3147350 3147396 16 92 1.0 1.5 1.2 7.3 141 chr2L 3147255 3` UTR Mad - chr2L 3147326 3` UTR Mad - chr2L 3147396 3` UTR Mad - chr2L_16_3145001 chr2L_3145001 RAL-370 85 chr2L 3202719 3202771 chr2L 3210168 3210220 mdg1 11 7449 2.0 1.0 1.5 4.4 7501 chr2L 3202719 intergenic not near genes chr2L 3206470 intergenic not near genes chr2L 3210220 intergenic CR45336 + chr2L_11_3205001 chr2L_3205001 RAL-370 86 chr2L 3226006 3226052 chr2L 3226218 3226260 6 208 1.5 3.0 2.2 1.9 254 chr2L 3226006 intergenic not near genes chr2L 3226133 intergenic not near genes chr2L 3226260 intergenic not near genes chr2L_6_3225001 chr2L_3225001 RAL-370 87 chr2L 3232026 3232074 chr2L 3232125 3232177 7 101 5.5 0.0 2.8 1.8 151 chr2L 3232026 intergenic not near genes chr2L 3232102 intergenic not near genes chr2L 3232177 intergenic not near genes chr2L_7_3230001 chr2L_3230001 RAL-370 88 chr2L 3240603 3240637 chr2L 3240982 3241006 11 381 4.0 4.5 4.2 2.1 403 chr2L 3240603 intergenic not near genes chr2L 3240804 intergenic not near genes chr2L 3241006 intergenic not near genes chr2L_11_3240001 chr2L_3240001 RAL-370 89 chr2L 3251475 3251526 chr2L 3259060 3259111 springer 15 7584 4.5 4.5 4.5 2.7 7636 chr2L 3251475 intergenic not near genes chr2L 3255293 intergenic not near genes chr2L 3259111 intergenic not near genes chr2L_15_3255001 chr2L_3255001 RAL-370 90 chr2L 3260708 3260715 chr2L 3260854 3260875 7 157 4.5 7.0 5.8 1.0 167 chr2L 3260708 intergenic CR45337 - chr2L 3260792 intergenic CR45337 - chr2L 3260875 intergenic CR45337 - chr2L_7_3260001 chr2L_3260001 RAL-370 91 chr2L 3261496 3261509 chr2L 3261608 3261621 4 112 1.5 9.5 5.5 0.6 125 chr2L 3261496 intergenic CR45338 -,CR45337 - chr2L 3261558 intergenic CR45338 -,CR45337 - chr2L 3261621 intergenic CR45338 -,CR45337 - chr2L_4_3260001 chr2L_3260001 RAL-370 92 chr2L 3272950 3272962 chr2L 3273046 3273058 7 96 0.5 8.5 4.5 1.3 108 chr2L 3272950 intergenic not near genes chr2L 3273004 intergenic not near genes chr2L 3273058 intergenic not near genes chr2L_7_3270001 chr2L_3270001 RAL-370 93 chr2L 3291217 3291261 chr2L 3291317 3291361 7 100 1.0 3.5 2.2 2.2 144 chr2L 3291217 intergenic CG9664 - chr2L 3291289 3` UTR CG9664 - chr2L 3291361 3` UTR CG9664 - chr2L_7_3290001 chr2L_3290001 RAL-370 94 chr2L 3314677 3314721 chr2L 3314774 3314817 18 93 5.0 2.0 3.5 4.0 140 chr2L 3314677 intron CG3277 + chr2L 3314747 intron CG3277 + chr2L 3314817 intron CG3277 + chr2L_18_3310001 chr2L_3310001 RAL-370 95 chr2L 3386223 3386269 chr2L 3386344 3386392 16 120 4.0 3.5 3.8 3.3 169 chr2L 3386223 intergenic not near genes chr2L 3386308 intergenic not near genes chr2L 3386392 intergenic CR45301 - chr2L_16_3385001 chr2L_3385001 RAL-370 96 chr2L 3388587 3388615 chr2L 3388848 3388876 pogo 8 261 5.0 3.5 4.2 1.5 289 chr2L 3388587 intergenic CG42460 - chr2L 3388732 intergenic CG42460 - chr2L 3388876 intergenic CG42460 -,CR44791 + chr2L_8_3385001 chr2L_3385001 RAL-370 97 chr2L 3437143 3437161 chr2L 3437241 3437261 4 101 0.0 3.5 1.8 1.4 118 chr2L 3437143 intergenic not near genes chr2L 3437202 intergenic not near genes chr2L 3437261 intergenic not near genes chr2L_4_3435001 chr2L_3435001 RAL-370 98 chr2L 3482131 3482183 chr2L 3482240 3482290 15 109 1.5 1.0 1.2 6.8 159 chr2L 3482131 intron CG15414 - chr2L 3482210 intron CG15414 - chr2L 3482290 intron CG15414 - chr2L_15_3480001 chr2L_3480001 RAL-370 99 chr2L 3569959 3569999 chr2L 3570100 3570139 11 141 2.0 3.5 2.8 2.9 180 chr2L 3569959 intergenic not near genes chr2L 3570049 intergenic not near genes chr2L 3570139 intergenic not near genes chr2L_11_3570001 chr2L_3570001 RAL-370 100 chr2L 3582877 3582900 chr2L 3582973 3582995 7 96 2.0 3.5 2.8 1.8 118 chr2L 3582877 intergenic not near genes chr2L 3582936 intergenic not near genes chr2L 3582995 intergenic not near genes chr2L_7_3580001 chr2L_3580001 RAL-370 101 chr2L 3603608 3603651 chr2L 3603721 3603767 21 116 4.0 2.0 3.0 5.2 159 chr2L 3603608 intergenic not near genes chr2L 3603688 intergenic not near genes chr2L 3603767 intergenic odd - chr2L_21_3600001 chr2L_3600001 RAL-370 102 chr2L 3632243 3632268 chr2L 3632342 3632365 7 97 0.0 9.5 4.8 1.2 122 chr2L 3632243 intron for - chr2L 3632304 intron for - chr2L 3632365 intron for - chr2L_7_3630001 chr2L_3630001 RAL-370 103 chr2L 3649771 3649802 chr2L 3654993 3655022 copia 9 5221 2.0 4.0 3.0 2.2 5251 chr2L 3649771 intron for - chr2L 3652396 intron for - chr2L 3655022 intron for - chr2L_9_3650001 chr2L_3650001 RAL-370 104 chr2L 3670708 3670760 chr2L 3670810 3670820 24 99 6.5 2.0 4.2 4.6 112 chr2L 3670708 intron CG34340 + chr2L 3670764 intron CG34340 + chr2L 3670820 intron CG34340 + chr2L_24_3670001 chr2L_3670001 RAL-370 105 chr2L 3819019 3819049 chr2L 3819120 3819151 9 101 3.5 0.5 2.0 3.0 132 chr2L 3819019 intergenic CR44077 + chr2L 3819085 intergenic not near genes chr2L 3819151 intergenic not near genes chr2L_9_3815001 chr2L_3815001 RAL-370 106 chr2L 3862408 3862512 chr2L 3862512 3862619 8 99 0.0 0.0 0.0 8.0 211 chr2L 3862408 intergenic CG3964 +,CR44078 - chr2L 3862514 intergenic CG3964 +,CR44078 - chr2L 3862619 intergenic CG3964 + chr2L_8_3860001 chr2L_3860001 RAL-370 107 chr2L 3891879 3891923 chr2L 3891983 3892025 15 104 5.5 4.5 5.0 2.5 146 chr2L 3891879 intron capu - chr2L 3891952 intron capu - chr2L 3892025 intron capu - chr2L_15_3890001 chr2L_3890001 RAL-370 108 chr2L 3943776 3943822 chr2L 3943887 3943933 7 111 0.0 3.0 1.5 2.8 157 chr2L 3943776 intron fred - chr2L 3943854 intron fred - chr2L 3943933 intron fred - chr2L_7_3940001 chr2L_3940001 RAL-370 109 chr2L 3960548 3960564 chr2L 3960738 3960753 8 189 8.0 4.5 6.2 1.1 205 chr2L 3960548 intron fred - chr2L 3960650 intron fred - chr2L 3960753 intron fred - chr2L_8_3960001 chr2L_3960001 RAL-370 110 chr2L 3960565 3960596 chr2L 3960733 3960785 16 186 3.0 4.0 3.5 3.6 220 chr2L 3960565 intron fred - chr2L 3960675 intron fred - chr2L 3960785 intron fred - chr2L_16_3960001 chr2L_3960001 RAL-370 111 chr2L 4037783 4037809 chr2L 4037889 4037916 11 107 4.0 1.0 2.5 3.1 133 chr2L 4037783 intron ed + chr2L 4037850 intron ed + chr2L 4037916 intron ed + chr2L_11_4035001 chr2L_4035001 RAL-370 112 chr2L 4066033 4066057 chr2L 4068878 4068902 Juan 4 2845 6.5 6.0 6.2 0.6 2869 chr2L 4066033 intron ed + chr2L 4067468 intron ed + chr2L 4068902 intron ed + chr2L_4_4065001 chr2L_4065001 RAL-370 113 chr2L 4082790 4082839 chr2L 4082893 4082907 9 96 4.5 6.5 5.5 1.4 117 chr2L 4082790 intron ed + chr2L 4082848 intron ed + chr2L 4082907 intron ed + chr2L_9_4080001 chr2L_4080001 RAL-370 114 chr2L 4119959 4119985 chr2L 4120056 4120082 7 97 7.5 3.0 5.2 1.1 123 chr2L 4119959 intergenic Sr-CIII + chr2L 4120020 intergenic Sr-CIII + chr2L 4120082 intergenic Sr-CIII + chr2L_7_4120001 chr2L_4120001 RAL-370 115 chr2L 4150621 4150654 chr2L 4150703 4150733 5 87 1.0 4.0 2.5 1.4 112 chr2L 4150621 exon CG2955 + chr2L 4150677 exon CG2955 + chr2L 4150733 exon CG2955 + chr2L_5_4150001 chr2L_4150001 RAL-370 116 chr2L 4155597 4155633 chr2L 4155858 4155893 7 261 0.0 6.0 3.0 1.8 296 chr2L 4155597 intergenic not near genes chr2L 4155745 intergenic not near genes chr2L 4155893 intergenic not near genes chr2L_7_4155001 chr2L_4155001 RAL-370 117 chr2L 4181296 4181304 chr2L 4183919 4183949 Burdock 4 2642 6.0 8.5 7.2 0.5 2653 chr2L 4181296 intergenic not near genes chr2L 4182622 intergenic not near genes chr2L 4183949 intergenic not near genes chr2L_4_4180001 chr2L_4180001 RAL-370 118 chr2L 4184454 4184497 chr2L 4184793 4184836 6 339 0.5 3.5 2.0 2.0 382 chr2L 4184454 intergenic not near genes chr2L 4184645 intergenic not near genes chr2L 4184836 intergenic not near genes chr2L_6_4180001 chr2L_4180001 RAL-370 119 chr2L 4296404 4296459 chr2L 4296682 4296703 15 265 3.5 5.5 4.5 2.7 299 chr2L 4296404 intron tutl + chr2L 4296554 intron tutl + chr2L 4296703 intron tutl + chr2L_15_4295001 chr2L_4295001 RAL-370 120 chr2L 4351452 4351502 chr2L 4351548 4351559 18 92 6.0 3.5 4.8 3.1 107 chr2L 4351452 intergenic CR44700 + chr2L 4351506 intergenic CR44700 + chr2L 4351559 intergenic CR44700 + chr2L_18_4350001 chr2L_4350001 RAL-370 121 chr2L 4356610 4356659 chr2L 4356708 4356755 13 97 0.5 3.5 2.0 4.3 145 chr2L 4356610 intergenic not near genes chr2L 4356682 intergenic not near genes chr2L 4356755 intergenic not near genes chr2L_13_4355001 chr2L_4355001 RAL-370 122 chr2L 4362194 4362236 chr2L 4362332 4362374 10 135 1.5 1.5 1.5 4.0 180 chr2L 4362194 5` UTR Traf4 + chr2L 4362284 5` UTR Traf4 + chr2L 4362374 5` UTR Traf4 + chr2L_10_4360001 chr2L_4360001 RAL-370 123 chr2L 4601686 4601734 chr2L 4609146 4609192 mdg1 18 7458 4.5 4.0 4.2 3.5 7506 chr2L 4601686 intron dp - chr2L 4605439 intron dp - chr2L 4609192 intron dp - chr2L_18_4605001 chr2L_4605001 RAL-370 124 chr2L 4661823 4661855 chr2L 4669423 4669455 opus 9 7600 5.5 8.5 7.0 1.1 7632 chr2L 4661823 intergenic not near genes chr2L 4665639 intergenic not near genes chr2L 4669455 intergenic not near genes chr2L_9_4665001 chr2L_4665001 RAL-370 125 chr2L 4677996 4678019 chr2L 4678095 4678115 6 98 2.5 6.5 4.5 1.1 119 chr2L 4677996 intergenic not near genes chr2L 4678056 intergenic not near genes chr2L 4678115 intergenic not near genes chr2L_6_4675001 chr2L_4675001 RAL-370 126 chr2L 4774179 4774204 chr2L 4774743 4774784 6 576 5.0 2.0 3.5 1.3 605 chr2L 4774179 intron CG15630 - chr2L 4774482 intron CG15630 - chr2L 4774784 intron CG15630 - chr2L_6_4770001 chr2L_4770001 RAL-370 127 chr2L 4793295 4793316 chr2L 4793608 4793615 8 312 6.0 3.5 4.8 1.4 320 chr2L 4793295 intron CG15630 - chr2L 4793455 intron CG15630 - chr2L 4793615 intron CG15630 - chr2L_8_4790001 chr2L_4790001 RAL-370 128 chr2L 4803285 4803331 chr2L 4803566 4803612 7 273 4.0 3.0 3.5 1.6 327 chr2L 4803285 intergenic not near genes chr2L 4803448 intergenic not near genes chr2L 4803612 intergenic not near genes chr2L_7_4800001 chr2L_4800001 RAL-370 129 chr2L 4803864 4803914 chr2L 4803968 4804013 17 104 2.0 2.0 2.0 5.7 149 chr2L 4803864 intergenic not near genes chr2L 4803938 intergenic not near genes chr2L 4804013 intergenic not near genes chr2L_17_4800001 chr2L_4800001 RAL-370 130 chr2L 4819472 4819515 chr2L 4819615 4819658 12 142 4.0 3.0 3.5 2.7 186 chr2L 4819472 intergenic not near genes chr2L 4819565 intergenic not near genes chr2L 4819658 intergenic not near genes chr2L_12_4815001 chr2L_4815001 RAL-370 131 chr2L 4858452 4858479 chr2L 4858560 4858587 11 108 2.5 4.5 3.5 2.4 135 chr2L 4858452 intron pog + chr2L 4858520 intron pog + chr2L 4858587 intron pog + chr2L_11_4855001 chr2L_4855001 RAL-370 132 chr2L 4862267 4862310 chr2L 4862361 4862404 12 95 4.0 3.5 3.8 2.5 137 chr2L 4862267 intron pog + chr2L 4862336 intron pog + chr2L 4862404 intron pog + chr2L_12_4860001 chr2L_4860001 RAL-370 133 chr2L 4869934 4869977 chr2L 4870039 4870060 14 102 1.5 6.0 3.8 2.9 126 chr2L 4869934 intron pog + chr2L 4869997 intron pog + chr2L 4870060 intron pog + chr2L_14_4870001 chr2L_4870001 RAL-370 134 chr2L 4918158 4918194 chr2L 4923251 4923287 jockey 9 5093 2.0 5.0 3.5 2.0 5129 chr2L 4918158 intron hoe1 - chr2L 4920722 intron hoe1 - chr2L 4923287 intron hoe1 - chr2L_9_4920001 chr2L_4920001 RAL-370 135 chr2L 4925657 4925695 chr2L 4925756 4925794 4 99 4.0 1.5 2.8 1.1 137 chr2L 4925657 intron hoe1 - chr2L 4925726 intron hoe1 - chr2L 4925794 intron hoe1 - chr2L_4_4925001 chr2L_4925001 RAL-370 136 chr2L 4929122 4929148 chr2L 4929227 4929253 13 104 6.5 3.5 5.0 2.2 131 chr2L 4929122 intron hoe1 - chr2L 4929188 intron hoe1 - chr2L 4929253 intron hoe1 - chr2L_13_4925001 chr2L_4925001 RAL-370 137 chr2L 4996072 4996111 chr2L 4996169 4996206 11 96 6.0 5.0 5.5 1.7 134 chr2L 4996072 intron Rtnl1 - chr2L 4996139 intron Rtnl1 - chr2L 4996206 intron Rtnl1 - chr2L_11_4995001 chr2L_4995001 RAL-370 138 chr2L 5092396 5092444 chr2L 5092503 5092551 10 104 2.5 4.0 3.2 2.4 155 chr2L 5092396 intron pgant5 - chr2L 5092474 intron pgant5 - chr2L 5092551 intron pgant5 - chr2L_10_5090001 chr2L_5090001 RAL-370 139 chr2L 5117285 5117325 chr2L 5117386 5117427 11 101 2.5 1.0 1.8 3.9 142 chr2L 5117285 intron Msp300 + chr2L 5117356 intron Msp300 + chr2L 5117427 intron Msp300 + chr2L_11_5115001 chr2L_5115001 RAL-370 140 chr2L 5147718 5147755 chr2L 5147960 5148007 11 246 4.0 2.0 3.0 2.8 289 chr2L 5147718 intron Msp300 + chr2L 5147862 intron Msp300 + chr2L 5148007 intron Msp300 + chr2L_11_5145001 chr2L_5145001 RAL-370 141 chr2L 5285582 5285592 chr2L 5285718 5285728 5 136 10.5 4.0 7.2 0.6 146 chr2L 5285582 intergenic not near genes chr2L 5285655 intergenic not near genes chr2L 5285728 intergenic not near genes chr2L_5_5285001 chr2L_5285001 RAL-370 142 chr2L 5285595 5285630 chr2L 5285714 5285747 10 124 3.0 3.5 3.2 2.4 152 chr2L 5285595 intergenic not near genes chr2L 5285671 intergenic not near genes chr2L 5285747 intergenic not near genes chr2L_10_5285001 chr2L_5285001 RAL-370 143 chr2L 5342758 5342789 chr2L 5345158 5345189 Doc 9 2399 3.0 7.5 5.2 1.5 2431 chr2L 5342758 intergenic not near genes chr2L 5343974 intergenic not near genes chr2L 5345189 intergenic not near genes chr2L_9_5340001 chr2L_5340001 RAL-370 144 chr2L 5378414 5378453 chr2L 5378512 5378551 10 99 3.0 1.5 2.2 3.1 137 chr2L 5378414 intergenic not near genes chr2L 5378482 intergenic not near genes chr2L 5378551 intergenic not near genes chr2L_10_5375001 chr2L_5375001 RAL-370 145 chr2L 5508520 5508538 chr2L 5508616 5508634 9 96 6.0 4.0 5.0 1.5 114 chr2L 5508520 intergenic not near genes chr2L 5508577 intergenic not near genes chr2L 5508634 intergenic not near genes chr2L_9_5505001 chr2L_5505001 RAL-370 146 chr2L 5508542 5508554 chr2L 5508615 5508649 9 92 2.5 4.0 3.2 2.1 107 chr2L 5508542 intergenic not near genes chr2L 5508596 intergenic not near genes chr2L 5508649 intergenic not near genes chr2L_9_5505001 chr2L_5505001 RAL-370 147 chr2L 5677170 5677222 chr2L 5677286 5677339 16 115 5.0 4.5 4.8 2.8 169 chr2L 5677170 intergenic not near genes chr2L 5677254 intergenic not near genes chr2L 5677339 intergenic not near genes chr2L_16_5675001 chr2L_5675001 RAL-370 148 chr2L 5719171 5719203 chr2L 5719280 5719333 16 118 3.0 5.5 4.2 3.1 162 chr2L 5719171 exon CG11149 - chr2L 5719252 exon CG11149 - chr2L 5719333 exon CG11149 - chr2L_16_5715001 chr2L_5715001 RAL-370 149 chr2L 5804999 5805042 chr2L 5805316 5805329 12 314 3.0 2.5 2.8 3.2 330 chr2L 5804999 intergenic CG11034 + chr2L 5805164 intergenic CG11034 + chr2L 5805329 intergenic CG11034 + chr2L_12_5805001 chr2L_5805001 RAL-370 150 chr2L 5814670 5814709 chr2L 5814773 5814812 10 103 3.5 4.5 4.0 2.0 142 chr2L 5814670 intergenic not near genes chr2L 5814741 intergenic not near genes chr2L 5814812 intergenic not near genes chr2L_10_5810001 chr2L_5810001 RAL-370 151 chr2L 5827700 5827714 chr2L 5836728 5836742 roo 5 9028 7.5 8.0 7.8 0.6 9042 chr2L 5827700 intron TrissinR + chr2L 5832221 intron TrissinR + chr2L 5836742 intron TrissinR + chr2L_5_5830001 chr2L_5830001 RAL-370 152 chr2L 5827719 5827738 chr2L 5836726 5836766 roo 6 9024 4.5 8.0 6.2 0.8 9047 chr2L 5827719 intron TrissinR + chr2L 5832242 intron TrissinR + chr2L 5836766 intron TrissinR + chr2L_6_5830001 chr2L_5830001 RAL-370 153 chr2L 5852501 5852515 chr2L 5852631 5852645 8 129 11.5 6.0 8.8 0.8 144 chr2L 5852501 intron TrissinR + chr2L 5852573 intron TrissinR + chr2L 5852645 intron TrissinR + chr2L_8_5850001 chr2L_5850001 RAL-370 154 chr2L 5852517 5852543 chr2L 5852624 5852647 12 116 6.0 4.5 5.2 1.9 130 chr2L 5852517 intron TrissinR + chr2L 5852582 intron TrissinR + chr2L 5852647 intron TrissinR + chr2L_12_5850001 chr2L_5850001 RAL-370 155 chr2L 5895928 5895990 chr2L 5896035 5896086 11 104 0.0 1.5 0.8 6.1 158 chr2L 5895928 intergenic not near genes chr2L 5896007 intergenic not near genes chr2L 5896086 intergenic not near genes chr2L_11_5895001 chr2L_5895001 RAL-370 156 chr2L 5904440 5904475 chr2L 5904540 5904551 12 98 4.5 0.0 2.2 3.8 111 chr2L 5904440 exon CG9021 - chr2L 5904496 intron CG9021 - chr2L 5904551 intron CG9021 - chr2L_12_5900001 chr2L_5900001 RAL-370 157 chr2L 5926304 5926600 chr2L 5926450 5926699 7 119 2.0 0.0 1.0 3.5 395 chr2L 5926304 intron dsf + chr2L 5926502 intron dsf + chr2L 5926699 intron dsf + chr2L_7_5925001 chr2L_5925001 RAL-370 158 chr2L 5931303 5931514 chr2L 5931435 5931614 18 129 3.5 3.5 3.5 4.0 311 chr2L 5931303 intron dsf + chr2L 5931458 intron dsf + chr2L 5931614 intron dsf + chr2L_18_5930001 chr2L_5930001 RAL-370 159 chr2L 5946694 5946729 chr2L 5946797 5946832 16 102 6.0 2.5 4.2 3.1 138 chr2L 5946694 intron Gpdh + chr2L 5946763 intron Gpdh + chr2L 5946832 intron Gpdh + chr2L_16_5945001 chr2L_5945001 RAL-370 160 chr2L 5961376 5961389 chr2L 5961462 5961478 4 88 5.5 4.0 4.8 0.7 102 chr2L 5961376 intergenic not near genes chr2L 5961427 intergenic not near genes chr2L 5961478 intergenic not near genes chr2L_4_5960001 chr2L_5960001 RAL-370 161 chr2L 5962264 5962291 chr2L 5962360 5962387 7 96 2.0 4.5 3.2 1.7 123 chr2L 5962264 intergenic not near genes chr2L 5962326 intergenic not near genes chr2L 5962387 intergenic not near genes chr2L_7_5960001 chr2L_5960001 RAL-370 162 chr2L 6002420 6002449 chr2L 6002526 6002555 5 106 3.0 2.5 2.8 1.3 135 chr2L 6002420 3` UTR Tsp26A + chr2L 6002488 3` UTR Tsp26A + chr2L 6002555 3` UTR Tsp26A + chr2L_5_6000001 chr2L_6000001 RAL-370 163 chr2L 6133582 6133608 chr2L 6133694 6133720 13 110 4.5 6.0 5.2 2.1 138 chr2L 6133582 3` UTR CR45719 - chr2L 6133651 3` UTR CR45719 - chr2L 6133720 intergenic CR45719 - chr2L_13_6130001 chr2L_6130001 RAL-370 164 chr2L 6173859 6173884 chr2L 6173955 6173978 6 94 4.5 1.5 3.0 1.5 119 chr2L 6173859 intergenic not near genes chr2L 6173918 intergenic not near genes chr2L 6173978 intergenic not near genes chr2L_6_6170001 chr2L_6170001 RAL-370 165 chr2L 6283938 6283973 chr2L 6284066 6284103 14 130 3.5 5.5 4.5 2.5 165 chr2L 6283938 intron Ddr + chr2L 6284020 intron Ddr + chr2L 6284103 intron Ddr + chr2L_14_6280001 chr2L_6280001 RAL-370 166 chr2L 6304885 6304931 chr2L 6304990 6305036 16 101 3.5 4.0 3.8 3.3 151 chr2L 6304885 intron Ddr + chr2L 6304960 intron Ddr + chr2L 6305036 intron Ddr + chr2L_16_6300001 chr2L_6300001 RAL-370 167 chr2L 6308303 6308337 chr2L 6308394 6308440 15 102 5.0 4.5 4.8 2.6 137 chr2L 6308303 intron Ddr + chr2L 6308372 intron Ddr + chr2L 6308440 intron,3` UTR Ddr +,CG43922 - chr2L_15_6305001 chr2L_6305001 RAL-370 168 chr2L 6363140 6363183 chr2L 6366078 6366095 Burdock 13 2931 2.0 3.5 2.8 3.4 2955 chr2L 6363140 intergenic not near genes chr2L 6364618 intergenic not near genes chr2L 6366095 intergenic not near genes chr2L_13_6360001 chr2L_6360001 RAL-370 169 chr2L 6414459 6414475 chr2L 6414885 6414901 6 426 2.0 2.5 2.2 1.9 442 chr2L 6414459 3` UTR CG13982 + chr2L 6414680 3` UTR CG13982 + chr2L 6414901 3` UTR CG13982 + chr2L_6_6410001 chr2L_6410001 RAL-370 170 chr2L 6426838 6426878 chr2L 6445118 6445158 roo 11 18279 4.0 2.0 3.0 2.8 18320 chr2L 6426838 3` UTR CG9527 - chr2L 6435998 intron CG9527 - chr2L 6445158 exon CG9527 - chr2L_11_6435001 chr2L_6435001 RAL-370 171 chr2L 6508889 6508907 chr2L 6509006 6509014 6 113 5.0 6.5 5.8 0.9 125 chr2L 6508889 intron CG31637 + chr2L 6508952 intron CG31637 + chr2L 6509014 intron CG31637 + chr2L_6_6505001 chr2L_6505001 RAL-370 172 chr2L 6508920 6508935 chr2L 6509003 6509049 9 110 1.5 5.5 3.5 2.0 129 chr2L 6508920 intron CG31637 + chr2L 6508984 intron CG31637 + chr2L 6509049 intron CG31637 + chr2L_9_6505001 chr2L_6505001 RAL-370 173 chr2L 6537122 6537165 chr2L 6537220 6537263 11 98 1.5 1.5 1.5 4.4 141 chr2L 6537122 intron eya - chr2L 6537192 intron eya - chr2L 6537263 intron eya - chr2L_11_6535001 chr2L_6535001 RAL-370 174 chr2L 6544350 6544394 chr2L 6544462 6544505 15 112 5.5 6.0 5.8 2.2 155 chr2L 6544350 intron eya - chr2L 6544428 intron eya - chr2L 6544505 intron eya - chr2L_15_6540001 chr2L_6540001 RAL-370 175 chr2L 6564826 6564880 chr2L 6564938 6564991 9 112 1.0 5.5 3.2 2.1 165 chr2L 6564826 3` UTR CG13766 - chr2L 6564908 3` UTR CG13766 - chr2L 6564991 3` UTR CG13766 - chr2L_9_6560001 chr2L_6560001 RAL-370 176 chr2L 6590079 6590123 chr2L 6590176 6590217 7 96 3.0 4.0 3.5 1.6 138 chr2L 6590079 intron CG11319 - chr2L 6590148 intron CG11319 - chr2L 6590217 intron CG11319 - chr2L_7_6590001 chr2L_6590001 RAL-370 177 chr2L 6598120 6598151 chr2L 6599073 6599089 15 957 6.0 4.5 5.2 2.4 969 chr2L 6598120 intron CG11319 - chr2L 6598604 intron CG11319 - chr2L 6599089 intron CG11319 - chr2L_15_6595001 chr2L_6595001 RAL-370 178 chr2L 6626869 6626918 chr2L 6626974 6627020 14 102 6.5 3.0 4.8 2.4 151 chr2L 6626869 intron Oatp26F - chr2L 6626944 intron Oatp26F - chr2L 6627020 intron Oatp26F - chr2L_14_6625001 chr2L_6625001 RAL-370 179 chr2L 6655508 6655524 chr2L 6655888 6655893 5 379 4.0 3.0 3.5 1.1 385 chr2L 6655508 exon CG31633 - chr2L 6655700 exon CG31633 - chr2L 6655893 exon CG31633 - chr2L_5_6655001 chr2L_6655001 RAL-370 180 chr2L 6655525 6655546 chr2L 6655887 6655925 5 377 3.0 3.0 3.0 1.2 400 chr2L 6655525 exon CG31633 - chr2L 6655725 exon CG31633 - chr2L 6655925 exon CG31633 - chr2L_5_6655001 chr2L_6655001 RAL-370 181 chr2L 6724511 6724546 chr2L 6724614 6724649 11 103 2.0 0.5 1.2 5.0 138 chr2L 6724511 intron Liprin-alpha + chr2L 6724580 intron Liprin-alpha + chr2L 6724649 intron Liprin-alpha + chr2L_11_6720001 chr2L_6720001 RAL-370 182 chr2L 6799528 6799571 chr2L 6799636 6799672 5 106 1.5 4.5 3.0 1.2 144 chr2L 6799528 5` UTR CR43610 + chr2L 6799600 5` UTR CR43610 + chr2L 6799672 intergenic CR43610 +,CG17376 - chr2L_5_6795001 chr2L_6795001 RAL-370 183 chr2L 6850364 6850407 chr2L 6850460 6850510 12 102 4.0 3.0 3.5 2.7 146 chr2L 6850364 intergenic not near genes chr2L 6850437 intergenic not near genes chr2L 6850510 intergenic not near genes chr2L_12_6850001 chr2L_6850001 RAL-370 184 chr2L 6876767 6876810 chr2L 6882965 6883021 diver 5 6194 6.0 5.5 5.8 0.7 6254 chr2L 6876767 intron Nlg2 + chr2L 6879894 intron Nlg2 + chr2L 6883021 intron Nlg2 + chr2L_5_6875001 chr2L_6875001 RAL-370 185 chr2L 6891429 6891458 chr2L 6891547 6891576 9 117 5.0 1.5 3.2 2.1 147 chr2L 6891429 intron Nlg2 + chr2L 6891502 intron Nlg2 + chr2L 6891576 intron Nlg2 + chr2L_9_6890001 chr2L_6890001 RAL-370 186 chr2L 7041262 7041287 chr2L 7041371 7041396 7 109 0.5 3.5 2.0 2.3 134 chr2L 7041262 intron milt + chr2L 7041329 intron milt + chr2L 7041396 intron milt + chr2L_7_7040001 chr2L_7040001 RAL-370 187 chr2L 7043516 7043530 chr2L 7043670 7043684 5 154 0.0 3.0 1.5 2.0 168 chr2L 7043516 intron milt + chr2L 7043600 intron milt + chr2L 7043684 intron milt + chr2L_5_7040001 chr2L_7040001 RAL-370 188 chr2L 7089852 7089902 chr2L 7089985 7090015 5 122 2.5 3.0 2.8 1.3 163 chr2L 7089852 intergenic not near genes chr2L 7089934 intergenic not near genes chr2L 7090015 intergenic not near genes chr2L_5_7085001 chr2L_7085001 RAL-370 189 chr2L 7111735 7111777 chr2L 7111840 7111845 4 96 0.5 0.0 0.2 3.3 110 chr2L 7111735 intron Pvf3 - chr2L 7111790 intron Pvf3 - chr2L 7111845 intron Pvf3 - chr2L_4_7110001 chr2L_7110001 RAL-370 190 chr2L 7136661 7136697 chr2L 7138290 7138306 10 1627 3.0 3.0 3.0 2.5 1645 chr2L 7136661 intron Pvf3 - chr2L 7137484 intron Pvf3 - chr2L 7138306 intron Pvf3 - chr2L_10_7135001 chr2L_7135001 RAL-370 191 chr2L 7191584 7191637 chr2L 7196131 7196166 9 4538 15.0 8.0 11.5 0.7 4582 chr2L 7191584 exon CG4497 - chr2L 7193875 intron CG4497 - chr2L 7196166 exon CG4502 - chr2L_9_7190001 chr2L_7190001 RAL-370 192 chr2L 7210990 7211026 chr2L 7211085 7211125 11 95 0.5 3.5 2.0 3.7 135 chr2L 7210990 intron CG13784 - chr2L 7211058 intron CG13784 - chr2L 7211125 intron CG13784 - chr2L_11_7210001 chr2L_7210001 RAL-370 193 chr2L 7247471 7247479 chr2L 7247569 7247577 6 98 14.0 3.5 8.8 0.6 106 chr2L 7247471 intron Ndae1 - chr2L 7247524 intron Ndae1 - chr2L 7247577 intron Ndae1 - chr2L_6_7245001 chr2L_7245001 RAL-370 194 chr2L 7247483 7247521 chr2L 7247566 7247618 8 95 4.0 2.5 3.2 1.9 135 chr2L 7247483 intron Ndae1 - chr2L 7247550 intron Ndae1 - chr2L 7247618 intron Ndae1 - chr2L_8_7245001 chr2L_7245001 RAL-370 195 chr2L 7249350 7249355 chr2L 7249441 7249455 4 98 5.0 2.0 3.5 0.9 105 chr2L 7249350 intergenic Ndae1 - chr2L 7249402 intergenic Ndae1 - chr2L 7249455 intergenic Ndae1 - chr2L_4_7245001 chr2L_7245001 RAL-370 196 chr2L 7254520 7254543 chr2L 7254618 7254641 7 98 0.0 2.0 1.0 3.5 121 chr2L 7254520 intergenic not near genes chr2L 7254580 intergenic not near genes chr2L 7254641 intergenic not near genes chr2L_7_7250001 chr2L_7250001 RAL-370 197 chr2L 7301303 7301325 chr2L 7301384 7301428 8 98 3.5 1.5 2.5 2.3 125 chr2L 7301303 intergenic not near genes chr2L 7301366 intergenic not near genes chr2L 7301428 intergenic not near genes chr2L_8_7300001 chr2L_7300001 RAL-370 198 chr2L 7343308 7343357 chr2L 7350443 7350493 roo 14 7134 1.0 4.5 2.8 3.7 7185 chr2L 7343308 intron Wnt6 + chr2L 7346900 intron Wnt6 + chr2L 7350493 intron Wnt6 + chr2L_14_7345001 chr2L_7345001 RAL-370 199 chr2L 7360288 7360330 chr2L 7360432 7360476 10 145 1.5 2.5 2.0 3.3 188 chr2L 7360288 intergenic not near genes chr2L 7360382 intergenic not near genes chr2L 7360476 intergenic not near genes chr2L_10_7360001 chr2L_7360001 RAL-370 200 chr2L 7375786 7375833 chr2L 7375916 7375966 8 132 2.5 4.0 3.2 1.9 180 chr2L 7375786 exon Wnt10 + chr2L 7375876 intron Wnt10 + chr2L 7375966 intron Wnt10 + chr2L_8_7375001 chr2L_7375001 RAL-370 201 chr2L 7461027 7461078 chr2L 7461302 7461353 18 271 3.5 3.5 3.5 4.0 326 chr2L 7461027 intron Gr28b - chr2L 7461190 intron Gr28b - chr2L 7461353 intron Gr28b - chr2L_18_7460001 chr2L_7460001 RAL-370 202 chr2L 7516312 7516355 chr2L 7516446 7516490 14 132 4.5 3.0 3.8 2.9 178 chr2L 7516312 intron RapGAP1 - chr2L 7516401 intron RapGAP1 - chr2L 7516490 intron RapGAP1 - chr2L_14_7515001 chr2L_7515001 RAL-370 203 chr2L 7555204 7555228 chr2L 7555301 7555325 9 96 0.0 7.5 3.8 1.9 121 chr2L 7555204 intron RapGAP1 - chr2L 7555264 intron RapGAP1 - chr2L 7555325 intron RapGAP1 - chr2L_9_7555001 chr2L_7555001 RAL-370 204 chr2L 7579873 7579920 chr2L 7579975 7580019 15 101 2.0 4.0 3.0 3.8 146 chr2L 7579873 intergenic not near genes chr2L 7579946 intergenic not near genes chr2L 7580019 intergenic not near genes chr2L_15_7575001 chr2L_7575001 RAL-370 205 chr2L 7640408 7640421 chr2L 7640514 7640527 5 106 3.5 2.0 2.8 1.3 119 chr2L 7640408 intergenic not near genes chr2L 7640468 intergenic not near genes chr2L 7640527 intergenic not near genes chr2L_5_7640001 chr2L_7640001 RAL-370 206 chr2L 7685493 7685513 chr2L 7685575 7685610 7 91 2.0 4.0 3.0 1.8 117 chr2L 7685493 intron Myo28B1 + chr2L 7685552 intron Myo28B1 + chr2L 7685610 intron Myo28B1 + chr2L_7_7685001 chr2L_7685001 RAL-370 207 chr2L 7702877 7702916 chr2L 7703065 7703085 7 178 2.0 5.0 3.5 1.6 208 chr2L 7702877 5` UTR Tep3 + chr2L 7702981 5` UTR Tep3 + chr2L 7703085 5` UTR Tep3 + chr2L_7_7700001 chr2L_7700001 RAL-370 208 chr2L 7765800 7765812 chr2L 7765914 7765924 5 114 6.0 0.0 3.0 1.2 124 chr2L 7765800 3` UTR CG7196 + chr2L 7765862 3` UTR CG7196 + chr2L 7765924 intergenic CG7196 + chr2L_5_7765001 chr2L_7765001 RAL-370 209 chr2L 7781475 7781498 chr2L 7781587 7781609 7 111 3.0 3.5 3.2 1.7 134 chr2L 7781475 5` UTR CG7164 + chr2L 7781542 5` UTR CG7164 + chr2L 7781609 5` UTR CG7164 + chr2L_7_7780001 chr2L_7780001 RAL-370 210 chr2L 7867550 7867569 chr2L 7867664 7867682 6 113 10.5 3.5 7.0 0.8 132 chr2L 7867550 intron Proc - chr2L 7867616 intron Proc - chr2L 7867682 intron Proc - chr2L_6_7865001 chr2L_7865001 RAL-370 211 chr2L 7922721 7922774 chr2L 7922822 7922875 7 96 4.0 4.0 4.0 1.4 154 chr2L 7922721 intron Snoo - chr2L 7922798 intron Snoo - chr2L 7922875 intron Snoo - chr2L_7_7920001 chr2L_7920001 RAL-370 212 chr2L 7941181 7941196 chr2L 7941278 7941280 4 92 4.0 9.0 6.5 0.5 99 chr2L 7941181 intron Snoo - chr2L 7941230 intron Snoo - chr2L 7941280 intron Snoo - chr2L_4_7940001 chr2L_7940001 RAL-370 213 chr2L 7959029 7959041 chr2L 7960460 7960469 pogo 8 1430 8.0 1.5 4.8 1.4 1440 chr2L 7959029 intron Snoo - chr2L 7959749 intron Snoo - chr2L 7960469 intron Snoo - chr2L_8_7955001 chr2L_7955001 RAL-370 214 chr2L 7959042 7959073 chr2L 7960459 7960506 pogo 7 1419 4.5 1.0 2.8 1.8 1464 chr2L 7959042 intron Snoo - chr2L 7959774 intron Snoo - chr2L 7960506 intron Snoo - chr2L_7_7955001 chr2L_7955001 RAL-370 215 chr2L 7977070 7977107 chr2L 7984066 7984070 297 6 6990 5.5 2.5 4.0 1.2 7000 chr2L 7977070 intron Snoo - chr2L 7980570 intron Snoo - chr2L 7984070 intron,5` UTR Snoo -,CG7231 + chr2L_6_7980001 chr2L_7980001 RAL-370 216 chr2L 8003033 8003059 chr2L 8003135 8003161 6 100 2.0 5.5 3.8 1.2 128 chr2L 8003033 intron Wwox - chr2L 8003097 intron Wwox - chr2L 8003161 intron Wwox - chr2L_6_8000001 chr2L_8000001 RAL-370 217 chr2L 8044079 8044125 chr2L 8044178 8044219 9 96 2.0 5.0 3.5 2.0 140 chr2L 8044079 intron CG7466 + chr2L 8044149 intron CG7466 + chr2L 8044219 intron CG7466 + chr2L_9_8040001 chr2L_8040001 RAL-370 218 chr2L 8089665 8089717 chr2L 8105693 8105745 12 16026 23.5 17.0 20.2 0.6 16080 chr2L 8089665 exon Bsg + chr2L 8097705 intron Bsg + chr2L 8105745 exon Bsg + chr2L_12_8095001 chr2L_8095001 RAL-370 219 chr2L 8106939 8107150 chr2L 8107074 8107282 23 134 25.0 21.0 23.0 1.0 343 chr2L 8106939 exon Bsg + chr2L 8107110 exon Bsg + chr2L 8107282 exon Bsg + chr2L_23_8105001 chr2L_8105001 RAL-370 220 chr2L 8107409 8107420 chr2L 8107749 8107768 4 355 20.0 21.5 20.8 0.2 359 chr2L 8107409 exon Bsg + chr2L 8107588 intron Bsg + chr2L 8107768 exon Bsg + chr2L_4_8105001 chr2L_8105001 RAL-370 221 chr2L 8128012 8128061 chr2L 8128114 8128132 18 99 5.5 2.0 3.8 3.8 120 chr2L 8128012 intron CG8668 + chr2L 8128072 intron CG8668 + chr2L 8128132 intron CG8668 + chr2L_18_8125001 chr2L_8125001 RAL-370 222 chr2L 8151224 8151235 chr2L 8151487 8151499 4 263 0.5 6.0 3.2 1.0 275 chr2L 8151224 intron,intron CG8552 -,CG43394 + chr2L 8151362 intron,intron CG8552 -,CG43394 + chr2L 8151499 intron,intron CG8552 -,CG43394 + chr2L_4_8150001 chr2L_8150001 RAL-370 223 chr2L 8151236 8151263 chr2L 8151486 8151526 7 259 0.5 6.0 3.2 1.7 290 chr2L 8151236 intron,intron CG8552 -,CG43394 + chr2L 8151381 intron,intron CG8552 -,CG43394 + chr2L 8151526 intron,intron CG8552 -,CG43394 + chr2L_7_8150001 chr2L_8150001 RAL-370 224 chr2L 8205592 8205616 chr2L 8205709 8205733 7 116 4.5 3.5 4.0 1.4 141 chr2L 8205592 3` UTR CR44120 - chr2L 8205662 intergenic CR44120 -,CR44121 -,CR44119 + chr2L 8205733 intergenic CR44121 -,CR44120 -,CR44119 +,CG8419 + chr2L_7_8205001 chr2L_8205001 RAL-370 225 chr2L 8230307 8230339 chr2L 8230411 8230439 5 103 1.5 4.0 2.8 1.3 132 chr2L 8230307 5` UTR Pvr - chr2L 8230373 intron Pvr - chr2L 8230439 intron Pvr - chr2L_5_8230001 chr2L_8230001 RAL-370 226 chr2L 8232161 8232198 chr2L 8232341 8232378 10 179 1.5 7.0 4.2 1.9 217 chr2L 8232161 intron Pvr - chr2L 8232270 intron Pvr - chr2L 8232378 intron Pvr - chr2L_10_8230001 chr2L_8230001 RAL-370 227 chr2L 8244716 8244747 chr2L 8244858 8244889 10 139 2.5 4.0 3.2 2.4 173 chr2L 8244716 intron CG8086 - chr2L 8244802 intron CG8086 - chr2L 8244889 intron CG8086 - chr2L_10_8240001 chr2L_8240001 RAL-370 228 chr2L 8256325 8256370 chr2L 8257646 8257693 12 1322 30.5 40.0 35.2 0.3 1368 chr2L 8256325 intron CG8086 - chr2L 8257009 intron CG8086 - chr2L 8257693 intergenic CG8086 - chr2L_12_8255001 chr2L_8255001 RAL-370 229 chr2L 8285003 8285028 chr2L 8285099 8285124 11 96 6.0 2.5 4.2 2.1 121 chr2L 8285003 intron Btk29A - chr2L 8285064 intron Btk29A - chr2L 8285124 intron Btk29A - chr2L_11_8285001 chr2L_8285001 RAL-370 230 chr2L 8287304 8287336 chr2L 8287550 8287586 9 249 2.5 2.5 2.5 2.6 282 chr2L 8287304 intron Btk29A - chr2L 8287445 intron Btk29A - chr2L 8287586 intron Btk29A - chr2L_9_8285001 chr2L_8285001 RAL-370 231 chr2L 8328157 8328196 chr2L 8335096 8335139 17 6946 32.0 33.5 32.8 0.5 6982 chr2L 8328157 intron CG14275 + chr2L 8331648 intron CG14275 + chr2L 8335139 intergenic not near genes chr2L_17_8330001 chr2L_8330001 RAL-370 232 chr2L 8336918 8336966 chr2L 8337017 8337045 9 96 0.5 2.0 1.2 4.1 127 chr2L 8336918 intergenic not near genes chr2L 8336982 intergenic not near genes chr2L 8337045 intergenic not near genes chr2L_9_8335001 chr2L_8335001 RAL-370 233 chr2L 8452402 8452452 chr2L 8461593 8461620 roo 14 9188 3.0 4.5 3.8 2.9 9218 chr2L 8452402 intron fu12 - chr2L 8457011 intron fu12 - chr2L 8461620 intron fu12 - chr2L_14_8455001 chr2L_8455001 RAL-370 234 chr2L 8461824 8461870 chr2L 8461925 8461967 11 100 3.0 3.0 3.0 2.8 143 chr2L 8461824 intron fu12 - chr2L 8461896 intron fu12 - chr2L 8461967 intron fu12 - chr2L_11_8460001 chr2L_8460001 RAL-370 235 chr2L 8502644 8502690 chr2L 8502748 8502794 11 101 5.0 5.5 5.2 1.8 150 chr2L 8502644 intron Dh31 - chr2L 8502719 intron Dh31 - chr2L 8502794 intron Dh31 - chr2L_11_8500001 chr2L_8500001 RAL-370 236 chr2L 8508975 8509005 chr2L 8509096 8509127 6 121 0.0 0.0 0.0 6.0 152 chr2L 8508975 intergenic CG13096 - chr2L 8509051 intergenic CG13096 - chr2L 8509127 3` UTR CG13096 - chr2L_6_8505001 chr2L_8505001 RAL-370 237 chr2L 8587294 8587310 chr2L 8587393 8587409 5 99 4.5 8.0 6.2 0.7 115 chr2L 8587294 intron Sema-1a + chr2L 8587352 intron Sema-1a + chr2L 8587409 intron Sema-1a + chr2L_5_8585001 chr2L_8585001 RAL-370 238 chr2L 8594449 8594490 chr2L 8601522 8601564 297 8 7074 8.0 3.0 5.5 1.2 7115 chr2L 8594449 intron,3` UTR Sema-1a +,CR43855 - chr2L 8598006 intron Sema-1a + chr2L 8601564 intron Sema-1a + chr2L_8_8595001 chr2L_8595001 RAL-370 239 chr2L 8652384 8652405 chr2L 8652488 8652506 6 104 8.0 2.0 5.0 1.0 122 chr2L 8652384 intron Sema-1a + chr2L 8652445 intron Sema-1a + chr2L 8652506 intron Sema-1a + chr2L_6_8650001 chr2L_8650001 RAL-370 240 chr2L 8709898 8709924 chr2L 8710015 8710017 4 110 0.5 3.0 1.8 1.4 119 chr2L 8709898 3` UTR raw - chr2L 8709958 3` UTR raw - chr2L 8710017 3` UTR raw - chr2L_4_8705001 chr2L_8705001 RAL-370 241 chr2L 8723096 8723144 chr2L 8731492 8731538 Tirant 15 8394 6.0 4.5 5.2 2.4 8442 chr2L 8723096 intron raw - chr2L 8727317 intron raw - chr2L 8731538 intron raw - chr2L_15_8725001 chr2L_8725001 RAL-370 242 chr2L 8736245 8736255 chr2L 8736345 8736355 5 100 1.0 1.0 1.0 2.5 110 chr2L 8736245 intron raw - chr2L 8736300 intron raw - chr2L 8736355 intron raw - chr2L_5_8735001 chr2L_8735001 RAL-370 243 chr2L 8799779 8799831 chr2L 8799915 8799920 16 132 4.0 5.0 4.5 2.9 141 chr2L 8799779 intergenic not near genes chr2L 8799850 intergenic not near genes chr2L 8799920 intergenic not near genes chr2L_16_8795001 chr2L_8795001 RAL-370 244 chr2L 8946705 8946734 chr2L 8946827 8946863 7 128 3.5 5.0 4.2 1.3 158 chr2L 8946705 intron C1GalTA - chr2L 8946784 intron C1GalTA - chr2L 8946863 intron C1GalTA - chr2L_7_8945001 chr2L_8945001 RAL-370 245 chr2L 9000258 9000307 chr2L 9007788 9007836 roo 12 7530 6.5 3.0 4.8 2.1 7578 chr2L 9000258 intergenic Try29F + chr2L 9004047 intergenic not near genes chr2L 9007836 intergenic not near genes chr2L_12_9000001 chr2L_9000001 RAL-370 246 chr2L 9036229 9036264 chr2L 9036338 9036345 15 104 5.5 0.5 3.0 3.8 116 chr2L 9036229 intergenic not near genes chr2L 9036287 intergenic not near genes chr2L 9036345 intergenic not near genes chr2L_15_9035001 chr2L_9035001 RAL-370 247 chr2L 9040027 9040056 chr2L 9040134 9040163 6 107 2.0 5.5 3.8 1.2 136 chr2L 9040027 intergenic not near genes chr2L 9040095 intergenic not near genes chr2L 9040163 intergenic not near genes chr2L_6_9040001 chr2L_9040001 RAL-370 248 chr2L 9040865 9040912 chr2L 9040961 9041008 20 94 3.5 4.5 4.0 4.0 143 chr2L 9040865 intergenic not near genes chr2L 9040936 intergenic not near genes chr2L 9041008 intergenic not near genes chr2L_20_9040001 chr2L_9040001 RAL-370 249 chr2L 9043384 9043424 chr2L 9044627 9044634 11 1238 5.5 3.5 4.5 2.0 1250 chr2L 9043384 intergenic not near genes chr2L 9044009 intergenic not near genes chr2L 9044634 intergenic not near genes chr2L_11_9040001 chr2L_9040001 RAL-370 250 chr2L 9068302 9068324 chr2L 9069126 9069148 4 824 14.5 23.5 19.0 0.2 846 chr2L 9068302 intron CG31708 - chr2L 9068725 intron CG31708 - chr2L 9069148 intron CG31708 - chr2L_4_9065001 chr2L_9065001 RAL-370 251 chr2L 9084337 9084340 chr2L 16217660 16217660 7 7133322 14.0 23.5 18.8 0.4 7133323 chr2L 9084337 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_7_12650001 chr2L_12650001 RAL-370 252 chr2L 9092011 9092046 chr2L 9092108 9092150 18 104 2.5 4.0 3.2 4.3 139 chr2L 9092011 intergenic not near genes chr2L 9092080 intergenic not near genes chr2L 9092150 intergenic not near genes chr2L_18_9090001 chr2L_9090001 RAL-370 253 chr2L 9095553 9095605 chr2L 9095660 9095696 14 104 1.5 2.5 2.0 4.7 143 chr2L 9095553 intergenic not near genes chr2L 9095624 intergenic not near genes chr2L 9095696 intergenic not near genes chr2L_14_9095001 chr2L_9095001 RAL-370 254 chr2L 9152140 9152164 chr2L 9152286 9152311 9 145 0.0 1.0 0.5 6.0 171 chr2L 9152140 intron CG32982 + chr2L 9152226 intron CG32982 + chr2L 9152311 intron CG32982 + chr2L_9_9150001 chr2L_9150001 RAL-370 255 chr2L 9235221 9235251 chr2L 9235341 9235377 12 122 5.0 0.5 2.8 3.2 156 chr2L 9235221 exon tai + chr2L 9235299 intron tai + chr2L 9235377 intron tai + chr2L_12_9235001 chr2L_9235001 RAL-370 256 chr2L 9270739 9270762 chr2L 9270834 9270851 7 104 6.0 3.0 4.5 1.3 112 chr2L 9270739 intron Ggamma30A + chr2L 9270795 intron Ggamma30A + chr2L 9270851 intron Ggamma30A + chr2L_7_9270001 chr2L_9270001 RAL-370 257 chr2L 9279968 9280015 chr2L 9280081 9280129 4 112 1.0 2.5 1.8 1.4 161 chr2L 9279968 intron Ggamma30A + chr2L 9280048 intron Ggamma30A + chr2L 9280129 intron Ggamma30A + chr2L_4_9280001 chr2L_9280001 RAL-370 258 chr2L 9296121 9296166 chr2L 9296241 9296287 12 121 3.5 7.5 5.5 1.8 166 chr2L 9296121 3` UTR Ggamma30A + chr2L 9296204 3` UTR Ggamma30A + chr2L 9296287 3` UTR Ggamma30A + chr2L_12_9295001 chr2L_9295001 RAL-370 259 chr2L 9297358 9297404 chr2L 9297455 9297501 21 94 3.0 8.5 5.8 3.1 143 chr2L 9297358 3` UTR Ggamma30A + chr2L 9297430 3` UTR Ggamma30A + chr2L 9297501 3` UTR Ggamma30A + chr2L_21_9295001 chr2L_9295001 RAL-370 260 chr2L 9304487 9304517 chr2L 9304585 9304616 8 99 0.5 6.0 3.2 1.9 129 chr2L 9304487 3` UTR CR42844 - chr2L 9304552 3` UTR CR42844 - chr2L 9304616 3` UTR CR42844 - chr2L_8_9300001 chr2L_9300001 RAL-370 261 chr2L 9317405 9317544 chr2L 9317543 9317841 8 177 0.0 0.0 0.0 8.0 436 chr2L 9317405 intergenic not near genes chr2L 9317623 intergenic not near genes chr2L 9317841 intergenic not near genes chr2L_8_9315001 chr2L_9315001 RAL-370 262 chr2L 9334993 9335028 chr2L 9335092 9335125 10 98 2.5 2.5 2.5 2.9 132 chr2L 9334993 intron Eaat1 + chr2L 9335059 intron Eaat1 + chr2L 9335125 intron Eaat1 + chr2L_10_9335001 chr2L_9335001 RAL-370 263 chr2L 9385100 9385151 chr2L 9385210 9385256 20 108 2.0 5.5 3.8 4.2 156 chr2L 9385100 intron Shawl - chr2L 9385178 intron Shawl - chr2L 9385256 intron Shawl - chr2L_20_9385001 chr2L_9385001 RAL-370 264 chr2L 9387237 9387276 chr2L 9387355 9387394 5 118 1.0 2.5 1.8 1.8 157 chr2L 9387237 intron Shawl - chr2L 9387316 intron Shawl - chr2L 9387394 intron,5` UTR Shawl -,Aldh + chr2L_5_9385001 chr2L_9385001 RAL-370 265 chr2L 9393483 9393529 chr2L 9396470 9396516 jockey 15 2986 4.5 7.5 6.0 2.1 3033 chr2L 9393483 intron Shawl - chr2L 9395000 intron Shawl - chr2L 9396516 intron Shawl - chr2L_15_9390001 chr2L_9390001 RAL-370 266 chr2L 9396922 9396961 chr2L 9397192 9397231 12 272 18.5 26.5 22.5 0.5 309 chr2L 9396922 intron Shawl - chr2L 9397076 intron,3` UTR Shawl -,CG4438 - chr2L 9397231 intron,exon Shawl -,CG4438 - chr2L_12_9395001 chr2L_9395001 RAL-370 267 chr2L 9411060 9411089 chr2L 9411498 9411527 5 436 3.0 7.0 5.0 0.8 467 chr2L 9411060 intron Shawl - chr2L 9411294 intron Shawl - chr2L 9411527 intron Shawl - chr2L_5_9410001 chr2L_9410001 RAL-370 268 chr2L 9456910 9456952 chr2L 9457011 9457017 10 97 2.5 4.0 3.2 2.4 107 chr2L 9456910 intron numb + chr2L 9456964 intron numb + chr2L 9457017 intron numb + chr2L_10_9455001 chr2L_9455001 RAL-370 269 chr2L 9463759 9463769 chr2L 9463864 9463874 4 105 2.0 1.5 1.8 1.4 115 chr2L 9463759 intergenic not near genes chr2L 9463816 intergenic not near genes chr2L 9463874 intergenic not near genes chr2L_4_9460001 chr2L_9460001 RAL-370 270 chr2L 9474761 9474809 chr2L 9474875 9474921 7 114 1.0 1.0 1.0 3.5 160 chr2L 9474761 intergenic not near genes chr2L 9474841 intergenic not near genes chr2L 9474921 intergenic not near genes chr2L_7_9470001 chr2L_9470001 RAL-370 271 chr2L 9506426 9506452 chr2L 9506586 9506622 6 168 3.0 5.0 4.0 1.2 196 chr2L 9506426 intron CG33298 + chr2L 9506524 intron CG33298 + chr2L 9506622 intron CG33298 + chr2L_6_9505001 chr2L_9505001 RAL-370 272 chr2L 9602135 9602159 chr2L 9602210 9602235 5 78 3.5 3.5 3.5 1.1 100 chr2L 9602135 intergenic not near genes chr2L 9602185 intergenic not near genes chr2L 9602235 intergenic not near genes chr2L_5_9600001 chr2L_9600001 RAL-370 273 chr2L 9730963 9730985 chr2L 9731066 9731085 6 102 5.5 6.5 6.0 0.9 122 chr2L 9730963 intron Nckx30C - chr2L 9731024 intron Nckx30C - chr2L 9731085 intron Nckx30C - chr2L_6_9730001 chr2L_9730001 RAL-370 274 chr2L 9730991 9731002 chr2L 9731061 9731105 9 98 4.5 5.0 4.8 1.6 114 chr2L 9730991 intron Nckx30C - chr2L 9731048 intron Nckx30C - chr2L 9731105 intron Nckx30C - chr2L_9_9730001 chr2L_9730001 RAL-370 275 chr2L 9775969 9776007 chr2L 9776071 9776109 7 102 2.0 2.5 2.2 2.2 140 chr2L 9775969 intergenic not near genes chr2L 9776039 intergenic not near genes chr2L 9776109 intergenic not near genes chr2L_7_9775001 chr2L_9775001 RAL-370 276 chr2L 9828249 9828272 chr2L 9828349 9828372 4 99 3.0 7.5 5.2 0.6 123 chr2L 9828249 intron nAChRalpha6 - chr2L 9828310 intron nAChRalpha6 - chr2L 9828372 intron nAChRalpha6 - chr2L_4_9825001 chr2L_9825001 RAL-370 277 chr2L 9829562 9829596 chr2L 9829784 9829814 17 221 6.5 4.5 5.5 2.6 252 chr2L 9829562 intron nAChRalpha6 - chr2L 9829688 intron nAChRalpha6 - chr2L 9829814 intron nAChRalpha6 - chr2L_17_9825001 chr2L_9825001 RAL-370 278 chr2L 9892484 9892533 chr2L 9892579 9892629 17 95 5.5 4.0 4.8 2.9 145 chr2L 9892484 intron mtDNA-helicase - chr2L 9892556 intron mtDNA-helicase - chr2L 9892629 intron mtDNA-helicase - chr2L_17_9890001 chr2L_9890001 RAL-370 279 chr2L 9973707 9973759 chr2L 9980845 9980897 HMS-Beagle 21 7133 4.0 4.0 4.0 4.2 7190 chr2L 9973707 intergenic not near genes chr2L 9977302 intergenic not near genes chr2L 9980897 intergenic not near genes chr2L_21_9975001 chr2L_9975001 RAL-370 280 chr2L 9986346 9986376 chr2L 9986445 9986477 9 107 2.5 4.0 3.2 2.1 131 chr2L 9986346 intron bib + chr2L 9986412 intron bib + chr2L 9986477 intron bib + chr2L_9_9985001 chr2L_9985001 RAL-370 281 chr2L 9989314 9989356 chr2L 9989411 9989451 10 97 4.5 3.0 3.8 2.1 137 chr2L 9989314 intron bib + chr2L 9989382 intron bib + chr2L 9989451 intron bib + chr2L_10_9985001 chr2L_9985001 RAL-370 282 chr2L 10002021 10002062 chr2L 10002133 10002174 7 111 5.0 7.0 6.0 1.0 153 chr2L 10002021 intron,intron CG31875 -,SoYb - chr2L 10002098 intron,intron CG31875 -,SoYb - chr2L 10002174 intron,intron CG31875 -,SoYb - chr2L_7_10000001 chr2L_10000001 RAL-370 283 chr2L 10002065 10002070 chr2L 10002132 10002182 5 102 3.0 7.0 5.0 0.8 117 chr2L 10002065 intron,intron CG31875 -,SoYb - chr2L 10002124 intron,intron CG31875 -,SoYb - chr2L 10002182 intron,intron CG31875 -,SoYb - chr2L_5_10000001 chr2L_10000001 RAL-370 284 chr2L 10005082 10005127 chr2L 10005195 10005239 15 113 7.0 7.0 7.0 1.9 157 chr2L 10005082 intron CG4747 + chr2L 10005160 intron CG4747 + chr2L 10005239 intron CG4747 + chr2L_15_10005001 chr2L_10005001 RAL-370 285 chr2L 10051712 10051751 chr2L 10051815 10051819 5 96 2.5 5.0 3.8 1.0 107 chr2L 10051712 5` UTR CR44874 + chr2L 10051766 5` UTR CR44874 + chr2L 10051819 5` UTR CR44874 + chr2L_5_10050001 chr2L_10050001 RAL-370 286 chr2L 10087458 10087474 chr2L 10087554 10087571 4 97 3.0 3.5 3.2 1.0 113 chr2L 10087458 intron CG44153 - chr2L 10087514 intron CG44153 - chr2L 10087571 intron CG44153 - chr2L_4_10085001 chr2L_10085001 RAL-370 287 chr2L 10087479 10087488 chr2L 10087552 10087582 4 90 1.5 3.5 2.5 1.1 103 chr2L 10087479 intron CG44153 - chr2L 10087530 intron CG44153 - chr2L 10087582 intron CG44153 - chr2L_4_10085001 chr2L_10085001 RAL-370 288 chr2L 10105268 10105284 chr2L 10105361 10105380 5 93 7.0 4.0 5.5 0.8 112 chr2L 10105268 intron,intron CG44153 -,CG34109 + chr2L 10105324 intron,intron CG44153 -,CG34109 + chr2L 10105380 intron,intron CG44153 -,CG34109 + chr2L_5_10105001 chr2L_10105001 RAL-370 289 chr2L 10138171 10138187 chr2L 10143435 10143448 Rt1c 9 5263 4.5 8.0 6.2 1.2 5277 chr2L 10138171 intron CG44153 - chr2L 10140810 intron CG44153 - chr2L 10143448 intron CG44153 - chr2L_9_10140001 chr2L_10140001 RAL-370 290 chr2L 10153180 10153234 chr2L 10153279 10153327 14 95 2.5 2.0 2.2 4.4 147 chr2L 10153180 intron,exon CG44153 -,CG4839 + chr2L 10153254 intron,intron CG44153 -,CG4839 + chr2L 10153327 intron,exon CG44153 -,CG4839 + chr2L_14_10150001 chr2L_10150001 RAL-370 291 chr2L 10156302 10156337 chr2L 10163792 10163827 blood 12 7488 9.5 5.0 7.2 1.5 7525 chr2L 10156302 intron,3` UTR CG44153 -,CG4839 + chr2L 10160064 intron CG44153 - chr2L 10163827 intron CG44153 - chr2L_12_10160001 chr2L_10160001 RAL-370 292 chr2L 10156341 10156355 chr2L 10163790 10163828 blood 4 7475 4.5 5.0 4.8 0.7 7487 chr2L 10156341 intron,3` UTR CG44153 -,CG4839 + chr2L 10160084 intron CG44153 - chr2L 10163828 intron CG44153 - chr2L_4_10160001 chr2L_10160001 RAL-370 293 chr2L 10180569 10180601 chr2L 10180676 10180685 11 104 4.0 0.0 2.0 3.7 116 chr2L 10180569 intergenic CG44153 - chr2L 10180627 intergenic CG44153 - chr2L 10180685 intergenic CG44153 - chr2L_11_10180001 chr2L_10180001 RAL-370 294 chr2L 10294661 10294689 chr2L 10294767 10294794 5 104 0.5 1.5 1.0 2.5 133 chr2L 10294661 intron Hand - chr2L 10294728 intron Hand - chr2L 10294794 intron Hand - chr2L_5_10290001 chr2L_10290001 RAL-370 295 chr2L 10321897 10321922 chr2L 10321998 10322006 11 96 6.5 5.0 5.8 1.6 109 chr2L 10321897 intron CG5381 - chr2L 10321952 intron CG5381 - chr2L 10322006 intron CG5381 - chr2L_11_10320001 chr2L_10320001 RAL-370 296 chr2L 10474371 10474394 chr2L 10474463 10474474 4 87 4.0 3.0 3.5 0.9 103 chr2L 10474371 intergenic RluA-1 - chr2L 10474422 intergenic RluA-1 - chr2L 10474474 intergenic RluA-1 - chr2L_4_10470001 chr2L_10470001 RAL-370 297 chr2L 10515340 10515374 chr2L 10515453 10515487 12 113 6.5 3.5 5.0 2.0 147 chr2L 10515340 intron,intron CG45083 -,Fatp - chr2L 10515414 intron,intron CG45083 -,Fatp - chr2L 10515487 intron,intron CG45083 -,Fatp - chr2L_12_10515001 chr2L_10515001 RAL-370 298 chr2L 10540870 10540879 chr2L 10540968 10540977 4 98 2.0 7.0 4.5 0.7 107 chr2L 10540870 intergenic not near genes chr2L 10540924 intergenic not near genes chr2L 10540977 intergenic not near genes chr2L_4_10540001 chr2L_10540001 RAL-370 299 chr2L 10563894 10563944 chr2L 10564006 10564051 12 111 4.0 2.5 3.2 2.9 157 chr2L 10563894 intron Trim9 + chr2L 10563972 intron Trim9 + chr2L 10564051 intron Trim9 + chr2L_12_10560001 chr2L_10560001 RAL-370 300 chr2L 10579028 10579080 chr2L 10579138 10579190 14 110 2.5 2.5 2.5 4.0 162 chr2L 10579028 intron Trim9 + chr2L 10579109 intron Trim9 + chr2L 10579190 intron Trim9 + chr2L_14_10575001 chr2L_10575001 RAL-370 301 chr2L 10580772 10580821 chr2L 10580873 10580898 12 96 4.5 1.5 3.0 3.0 126 chr2L 10580772 intron Trim9 + chr2L 10580835 intron Trim9 + chr2L 10580898 intron Trim9 + chr2L_12_10580001 chr2L_10580001 RAL-370 302 chr2L 10592824 10592872 chr2L 10600506 10600553 opus 9 7681 1.5 5.0 3.2 2.1 7729 chr2L 10592824 intron Trim9 + chr2L 10596688 intron Trim9 + chr2L 10600553 intron Trim9 + chr2L_9_10595001 chr2L_10595001 RAL-370 303 chr2L 10683426 10683477 chr2L 10683525 10683576 10 99 1.0 0.0 0.5 6.7 150 chr2L 10683426 3` UTR CG7299 - chr2L 10683501 3` UTR CG7299 - chr2L 10683576 3` UTR CG7299 - chr2L_10_10680001 chr2L_10680001 RAL-370 304 chr2L 10704935 10704946 chr2L 10705049 10705058 6 114 3.0 4.0 3.5 1.3 123 chr2L 10704935 intron Lip2 - chr2L 10704996 intron Lip2 - chr2L 10705058 exon Lip2 - chr2L_6_10700001 chr2L_10700001 RAL-370 305 chr2L 10762409 10762420 chr2L 10762506 10762517 4 97 2.0 2.5 2.2 1.2 108 chr2L 10762409 intron CG6495 + chr2L 10762463 intron CG6495 + chr2L 10762517 intron CG6495 + chr2L_4_10760001 chr2L_10760001 RAL-370 306 chr2L 10777202 10777243 chr2L 10777334 10777370 7 126 10.5 0.0 5.2 1.1 168 chr2L 10777202 intron CG31869 - chr2L 10777286 intron CG31869 - chr2L 10777370 intron CG31869 - chr2L_7_10775001 chr2L_10775001 RAL-370 307 chr2L 10795407 10795458 chr2L 10795557 10795562 8 140 1.5 4.0 2.8 2.1 155 chr2L 10795407 intron CG31869 - chr2L 10795484 intron CG31869 - chr2L 10795562 intron CG31869 - chr2L_8_10795001 chr2L_10795001 RAL-370 308 chr2L 10809508 10809553 chr2L 10809608 10809626 17 98 3.0 2.5 2.8 4.5 118 chr2L 10809508 intron Nos - chr2L 10809567 intron Nos - chr2L 10809626 intron Nos - chr2L_17_10805001 chr2L_10805001 RAL-370 309 chr2L 10862861 10862870 chr2L 10864453 10864477 Rt1c 5 1599 4.0 4.5 4.2 1.0 1616 chr2L 10862861 3` UTR CR43807 - chr2L 10863669 intron CR43807 - chr2L 10864477 3` UTR CR43807 - chr2L_5_10860001 chr2L_10860001 RAL-370 310 chr2L 10874984 10875028 chr2L 10875086 10875130 12 100 2.0 3.0 2.5 3.4 146 chr2L 10874984 intergenic not near genes chr2L 10875057 intergenic not near genes chr2L 10875130 intergenic not near genes chr2L_12_10875001 chr2L_10875001 RAL-370 311 chr2L 10891462 10891519 chr2L 10891596 10891653 8 123 5.5 2.5 4.0 1.6 191 chr2L 10891462 intergenic not near genes chr2L 10891558 intergenic not near genes chr2L 10891653 intergenic not near genes chr2L_8_10890001 chr2L_10890001 RAL-370 312 chr2L 10919798 10919819 chr2L 10919899 10919928 5 107 2.5 5.0 3.8 1.0 130 chr2L 10919798 intron dpr2 - chr2L 10919863 intron dpr2 - chr2L 10919928 intron dpr2 - chr2L_5_10915001 chr2L_10915001 RAL-370 313 chr2L 10946942 10946974 chr2L 10956176 10956209 roo 4 9232 0.5 7.0 3.8 0.8 9267 chr2L 10946942 intron dpr2 - chr2L 10951576 intron dpr2 - chr2L 10956209 intron dpr2 - chr2L_4_10950001 chr2L_10950001 RAL-370 314 chr2L 10987590 10987627 chr2L 10987698 10987737 5 109 1.5 1.0 1.2 2.3 147 chr2L 10987590 intergenic piwi -,CG12253 + chr2L 10987664 intergenic CG12253 +,piwi - chr2L 10987737 intergenic CG12253 +,piwi - chr2L_5_10985001 chr2L_10985001 RAL-370 315 chr2L 11084526 11084564 chr2L 11084773 11084813 10 245 3.0 3.0 3.0 2.5 287 chr2L 11084526 intron AstCC - chr2L 11084670 intron AstCC - chr2L 11084813 exon AstCC - chr2L_10_11080001 chr2L_11080001 RAL-370 316 chr2L 11147237 11147288 chr2L 11147345 11147361 9 101 2.5 1.0 1.8 3.2 124 chr2L 11147237 intron Gyc32E - chr2L 11147299 intron Gyc32E - chr2L 11147361 intron Gyc32E - chr2L_9_11145001 chr2L_11145001 RAL-370 317 chr2L 11166304 11166354 chr2L 11166662 11166711 16 357 2.0 0.5 1.2 7.3 407 chr2L 11166304 intron Ca-beta - chr2L 11166508 intron Ca-beta - chr2L 11166711 intron Ca-beta - chr2L_16_11165001 chr2L_11165001 RAL-370 318 chr2L 11214974 11214994 chr2L 11215079 11215102 12 106 9.5 0.0 4.8 2.1 128 chr2L 11214974 intron ab + chr2L 11215038 intron ab + chr2L 11215102 intron ab + chr2L_12_11215001 chr2L_11215001 RAL-370 319 chr2L 11292359 11292408 chr2L 11292460 11292510 9 102 4.0 4.5 4.2 1.7 151 chr2L 11292359 intergenic not near genes chr2L 11292434 intergenic not near genes chr2L 11292510 intergenic not near genes chr2L_9_11290001 chr2L_11290001 RAL-370 320 chr2L 11303266 11303269 chr2L 11303363 11303366 4 97 7.5 0.0 3.8 0.8 100 chr2L 11303266 intergenic not near genes chr2L 11303316 intergenic not near genes chr2L 11303366 intergenic not near genes chr2L_4_11300001 chr2L_11300001 RAL-370 321 chr2L 11315257 11315272 chr2L 11317681 11317696 G2 6 2422 2.5 3.5 3.0 1.5 2439 chr2L 11315257 intergenic not near genes chr2L 11316476 intergenic not near genes chr2L 11317696 intergenic not near genes chr2L_6_11315001 chr2L_11315001 RAL-370 322 chr2L 11364461 11364509 chr2L 11364556 11364605 8 90 5.0 2.0 3.5 1.8 144 chr2L 11364461 intron salr + chr2L 11364533 intron salr + chr2L 11364605 intron salr + chr2L_8_11360001 chr2L_11360001 RAL-370 323 chr2L 11404769 11404800 chr2L 11404859 11404896 6 90 7.0 4.0 5.5 0.9 127 chr2L 11404769 intergenic not near genes chr2L 11404832 intergenic not near genes chr2L 11404896 intergenic not near genes chr2L_6_11400001 chr2L_11400001 RAL-370 324 chr2L 11418637 11418683 chr2L 11418735 11418782 15 95 2.5 3.5 3.0 3.8 145 chr2L 11418637 intergenic not near genes chr2L 11418710 intergenic not near genes chr2L 11418782 intergenic not near genes chr2L_15_11415001 chr2L_11415001 RAL-370 325 chr2L 11457048 11457059 chr2L 11457270 11457277 6 221 7.5 1.5 4.5 1.1 229 chr2L 11457048 intergenic not near genes chr2L 11457162 intergenic not near genes chr2L 11457277 intergenic not near genes chr2L_6_11455001 chr2L_11455001 RAL-370 326 chr2L 11496620 11496648 chr2L 11496718 11496744 9 97 3.5 1.5 2.5 2.6 124 chr2L 11496620 intergenic CG6488 - chr2L 11496682 intergenic CG6488 - chr2L 11496744 intergenic CG6488 - chr2L_9_11495001 chr2L_11495001 RAL-370 327 chr2L 11517611 11517656 chr2L 11517711 11517759 10 93 3.0 3.5 3.2 2.4 148 chr2L 11517611 exon CG4970 + chr2L 11517685 exon CG4970 + chr2L 11517759 exon CG4970 + chr2L_10_11515001 chr2L_11515001 RAL-370 328 chr2L 11540565 11540610 chr2L 11547990 11548032 Tabor 5 7423 3.5 3.5 3.5 1.1 7467 chr2L 11540565 intergenic not near genes chr2L 11544298 intergenic not near genes chr2L 11548032 intergenic not near genes chr2L_5_11540001 chr2L_11540001 RAL-370 329 chr2L 11555391 11555430 chr2L 11555530 11555566 5 139 1.5 1.5 1.5 2.0 175 chr2L 11555391 intergenic not near genes chr2L 11555478 intergenic not near genes chr2L 11555566 intergenic not near genes chr2L_5_11555001 chr2L_11555001 RAL-370 330 chr2L 11563626 11563653 chr2L 11568850 11568877 copia 5 5224 7.5 6.5 7.0 0.6 5251 chr2L 11563626 intergenic not near genes chr2L 11566252 intergenic not near genes chr2L 11568877 intergenic not near genes chr2L_5_11565001 chr2L_11565001 RAL-370 331 chr2L 11563654 11563669 chr2L 11568845 11568879 copia 6 5207 4.0 4.5 4.2 1.2 5225 chr2L 11563654 intergenic not near genes chr2L 11566266 intergenic not near genes chr2L 11568879 intergenic not near genes chr2L_6_11565001 chr2L_11565001 RAL-370 332 chr2L 11633147 11633200 chr2L 11633269 11633319 14 110 2.5 4.0 3.2 3.3 172 chr2L 11633147 intergenic not near genes chr2L 11633233 intergenic not near genes chr2L 11633319 intergenic not near genes chr2L_14_11630001 chr2L_11630001 RAL-370 333 chr2L 11673651 11673688 chr2L 11673766 11673770 11 112 1.5 1.5 1.5 4.4 119 chr2L 11673651 intergenic not near genes chr2L 11673710 intergenic not near genes chr2L 11673770 intergenic not near genes chr2L_11_11670001 chr2L_11670001 RAL-370 334 chr2L 11713486 11713533 chr2L 11720974 11721021 blood 8 7487 5.0 8.0 6.5 1.1 7535 chr2L 11713486 intergenic not near genes chr2L 11717254 intergenic not near genes chr2L 11721021 intergenic CR44143 + chr2L_8_11715001 chr2L_11715001 RAL-370 335 chr2L 11828398 11828445 chr2L 11828512 11828559 7 112 0.0 4.0 2.0 2.3 161 chr2L 11828398 intron,intron Pde1c -,esc - chr2L 11828478 intron,intron Pde1c -,esc - chr2L 11828559 intron,intron Pde1c -,esc - chr2L_7_11825001 chr2L_11825001 RAL-370 336 chr2L 11841351 11841388 chr2L 11841449 11841486 6 98 2.0 1.0 1.5 2.4 135 chr2L 11841351 intron Pde1c - chr2L 11841418 intron Pde1c - chr2L 11841486 intron Pde1c - chr2L_6_11840001 chr2L_11840001 RAL-370 337 chr2L 11862344 11862390 chr2L 11862456 11862501 15 112 3.0 5.5 4.2 2.9 157 chr2L 11862344 intron Pde1c - chr2L 11862422 intron Pde1c - chr2L 11862501 intron Pde1c - chr2L_15_11860001 chr2L_11860001 RAL-370 338 chr2L 11866986 11867012 chr2L 11867118 11867144 8 132 4.0 2.5 3.2 1.9 158 chr2L 11866986 intron Pde1c - chr2L 11867065 intron Pde1c - chr2L 11867144 intron Pde1c - chr2L_8_11865001 chr2L_11865001 RAL-370 339 chr2L 11927171 11927213 chr2L 11927435 11927459 10 258 3.5 1.0 2.2 3.1 288 chr2L 11927171 intron Pde1c - chr2L 11927315 intron Pde1c - chr2L 11927459 intron Pde1c - chr2L_10_11925001 chr2L_11925001 RAL-370 340 chr2L 11951949 11951987 chr2L 11952057 11952095 5 108 1.0 1.5 1.2 2.3 146 chr2L 11951949 intergenic CR43314 - chr2L 11952022 intergenic CR43314 - chr2L 11952095 intergenic CR43314 - chr2L_5_11950001 chr2L_11950001 RAL-370 341 chr2L 12031381 12031415 chr2L 12031482 12031516 9 100 0.5 2.0 1.2 4.1 135 chr2L 12031381 intron dmGlut + chr2L 12031448 intron dmGlut + chr2L 12031516 intron dmGlut + chr2L_9_12030001 chr2L_12030001 RAL-370 342 chr2L 12067314 12067353 chr2L 12074386 12074424 297 8 7072 2.5 2.5 2.5 2.3 7110 chr2L 12067314 intergenic not near genes chr2L 12070869 intergenic not near genes chr2L 12074424 intergenic not near genes chr2L_8_12070001 chr2L_12070001 RAL-370 343 chr2L 12156094 12156135 chr2L 12156203 12156244 9 109 2.5 4.0 3.2 2.1 150 chr2L 12156094 intron CG31760 + chr2L 12156169 intron CG31760 + chr2L 12156244 intron CG31760 + chr2L_9_12155001 chr2L_12155001 RAL-370 344 chr2L 12169533 12169574 chr2L 12169633 12169674 8 100 2.5 2.5 2.5 2.3 141 chr2L 12169533 3` UTR CG31760 + chr2L 12169604 3` UTR CG31760 + chr2L 12169674 3` UTR CG31760 + chr2L_8_12165001 chr2L_12165001 RAL-370 345 chr2L 12254012 12254043 chr2L 12254123 12254134 9 109 5.0 0.0 2.5 2.6 122 chr2L 12254012 intron aret + chr2L 12254073 intron aret + chr2L 12254134 intron aret + chr2L_9_12250001 chr2L_12250001 RAL-370 346 chr2L 12283882 12283922 chr2L 12284027 12284067 5 145 5.5 0.0 2.8 1.3 185 chr2L 12283882 intron aret + chr2L 12283974 intron aret + chr2L 12284067 intron aret + chr2L_5_12280001 chr2L_12280001 RAL-370 347 chr2L 12286922 12286967 chr2L 12287022 12287068 20 99 5.0 0.0 2.5 5.7 146 chr2L 12286922 intron aret + chr2L 12286995 intron aret + chr2L 12287068 intron aret + chr2L_20_12285001 chr2L_12285001 RAL-370 348 chr2L 12377334 12377365 chr2L 12377425 12377469 22 103 2.0 5.0 3.5 4.9 135 chr2L 12377334 intron bru-2 + chr2L 12377402 intron bru-2 + chr2L 12377469 intron bru-2 + chr2L_22_12375001 chr2L_12375001 RAL-370 349 chr2L 12394969 12394995 chr2L 12395100 12395126 4 132 2.0 4.5 3.2 1.0 157 chr2L 12394969 intron bru-2 + chr2L 12395048 intron bru-2 + chr2L 12395126 intron bru-2 + chr2L_4_12395001 chr2L_12395001 RAL-370 350 chr2L 12487871 12487888 chr2L 12487972 12487989 6 101 12.5 5.5 9.0 0.6 118 chr2L 12487871 intron bun - chr2L 12487930 intron bun - chr2L 12487989 intron bun - chr2L_6_12485001 chr2L_12485001 RAL-370 351 chr2L 12487889 12487914 chr2L 12487971 12487989 9 96 6.5 5.5 6.0 1.3 100 chr2L 12487889 intron bun - chr2L 12487939 intron bun - chr2L 12487989 intron bun - chr2L_9_12485001 chr2L_12485001 RAL-370 352 chr2L 12510113 12510135 chr2L 12510218 12510218 11 102 9.0 12.0 10.5 1.0 105 chr2L 12510113 intron bun - chr2L 12510166 intron bun - chr2L 12510218 intron bun - chr2L_11_12510001 chr2L_12510001 RAL-370 353 chr2L 12529233 12529258 chr2L 12529398 12529430 6 171 2.0 7.0 4.5 1.1 197 chr2L 12529233 intron bun - chr2L 12529332 intron bun - chr2L 12529430 intron bun - chr2L_6_12525001 chr2L_12525001 RAL-370 354 chr2L 12547446 12547495 chr2L 12547550 12547574 5 97 0.0 0.0 0.0 5.0 128 chr2L 12547446 intergenic not near genes chr2L 12547510 intergenic not near genes chr2L 12547574 intergenic not near genes chr2L_5_12545001 chr2L_12545001 RAL-370 355 chr2L 12558306 12558333 chr2L 12565455 12565482 HMS-Beagle 4 7149 8.0 3.0 5.5 0.6 7176 chr2L 12558306 intergenic not near genes chr2L 12561894 intergenic not near genes chr2L 12565482 intergenic not near genes chr2L_4_12560001 chr2L_12560001 RAL-370 356 chr2L 12638759 12638801 chr2L 12638882 12638923 12 122 3.0 4.5 3.8 2.5 164 chr2L 12638759 intron Ref2 - chr2L 12638841 intron Ref2 - chr2L 12638923 intron Ref2 - chr2L_12_12635001 chr2L_12635001 RAL-370 357 chr2L 12643151 12643189 chr2L 12643248 12643286 5 97 0.0 0.0 0.0 5.0 135 chr2L 12643151 intron Ref2 - chr2L 12643218 intron Ref2 - chr2L 12643286 intron Ref2 - chr2L_5_12640001 chr2L_12640001 RAL-370 358 chr2L 12653785 12653797 chr2L 12653919 12653934 4 136 2.5 5.5 4.0 0.8 149 chr2L 12653785 intergenic not near genes chr2L 12653860 intergenic not near genes chr2L 12653934 intergenic not near genes chr2L_4_12650001 chr2L_12650001 RAL-370 359 chr2L 12731040 12731086 chr2L 12735825 12735873 F-element 12 4786 7.0 3.5 5.2 1.9 4833 chr2L 12731040 intron MRP + chr2L 12733456 intron MRP + chr2L 12735873 intron MRP + chr2L_12_12730001 chr2L_12730001 RAL-370 360 chr2L 12739163 12739199 chr2L 12743954 12744000 Doc 10 4797 7.5 6.5 7.0 1.2 4837 chr2L 12739163 exon MRP + chr2L 12741582 intron MRP + chr2L 12744000 exon MRP + chr2L_10_12740001 chr2L_12740001 RAL-370 361 chr2L 12751292 12751308 chr2L 12751395 12751411 5 103 5.5 2.0 3.8 1.0 119 chr2L 12751292 intergenic not near genes chr2L 12751352 intergenic not near genes chr2L 12751411 intergenic not near genes chr2L_5_12750001 chr2L_12750001 RAL-370 362 chr2L 12751311 12751340 chr2L 12751391 12751407 8 92 2.5 1.5 2.0 2.7 96 chr2L 12751311 intergenic not near genes chr2L 12751359 intergenic not near genes chr2L 12751407 intergenic not near genes chr2L_8_12750001 chr2L_12750001 RAL-370 363 chr2L 12760228 12760247 chr2L 12760344 12760363 6 116 4.0 2.5 3.2 1.4 135 chr2L 12760228 intergenic CG15483 - chr2L 12760296 intergenic CG15483 - chr2L 12760363 3` UTR CG15483 - chr2L_6_12760001 chr2L_12760001 RAL-370 364 chr2L 12781792 12781805 chr2L 12789252 12789274 Quasimodo 4 7466 7.0 4.5 5.8 0.6 7482 chr2L 12781792 intergenic not near genes chr2L 12785533 intergenic not near genes chr2L 12789274 intergenic not near genes chr2L_4_12785001 chr2L_12785001 RAL-370 365 chr2L 12791596 12791627 chr2L 12795291 12795311 F-element 11 3691 2.0 9.0 5.5 1.7 3715 chr2L 12791596 intergenic not near genes chr2L 12793454 intergenic not near genes chr2L 12795311 intergenic not near genes chr2L_11_12790001 chr2L_12790001 RAL-370 366 chr2L 12791630 12791633 chr2L 12795279 12795303 F-element 4 3666 2.0 6.5 4.2 0.8 3673 chr2L 12791630 intergenic not near genes chr2L 12793466 intergenic not near genes chr2L 12795303 intergenic not near genes chr2L_4_12790001 chr2L_12790001 RAL-370 367 chr2L 12835541 12835577 chr2L 12835670 12835706 4 129 3.5 1.0 2.2 1.2 165 chr2L 12835541 intergenic not near genes chr2L 12835624 intergenic not near genes chr2L 12835706 intergenic not near genes chr2L_4_12835001 chr2L_12835001 RAL-370 368 chr2L 12861677 12861722 chr2L 12863164 12863209 hobo 8 1484 4.0 1.5 2.8 2.1 1532 chr2L 12861677 intergenic not near genes chr2L 12862443 intergenic not near genes chr2L 12863209 intergenic not near genes chr2L_8_12860001 chr2L_12860001 RAL-370 369 chr2L 12933831 12933880 chr2L 12941318 12941367 blood 20 7485 4.5 5.0 4.8 3.4 7536 chr2L 12933831 intergenic not near genes chr2L 12937599 intergenic not near genes chr2L 12941367 intergenic not near genes chr2L_20_12935001 chr2L_12935001 RAL-370 370 chr2L 12956004 12956055 chr2L 12956105 12956133 19 98 6.5 4.5 5.5 2.9 129 chr2L 12956004 intergenic not near genes chr2L 12956068 intergenic not near genes chr2L 12956133 intergenic not near genes chr2L_19_12955001 chr2L_12955001 RAL-370 371 chr2L 13036224 13036273 chr2L 13036486 13036492 X-element 9 257 4.5 3.5 4.0 1.8 268 chr2L 13036224 intron CG9932 - chr2L 13036358 intron CG9932 - chr2L 13036492 intron CG9932 - chr2L_9_13035001 chr2L_13035001 RAL-370 372 chr2L 13045334 13045368 chr2L 13045432 13045471 11 103 5.5 5.5 5.5 1.7 137 chr2L 13045334 intron CG9932 - chr2L 13045402 intron CG9932 - chr2L 13045471 intron CG9932 - chr2L_11_13045001 chr2L_13045001 RAL-370 373 chr2L 13047933 13047977 chr2L 13048077 13048122 10 144 2.0 4.0 3.0 2.5 189 chr2L 13047933 intron CG9932 - chr2L 13048028 intron CG9932 - chr2L 13048122 intron CG9932 - chr2L_10_13045001 chr2L_13045001 RAL-370 374 chr2L 13069257 13069303 chr2L 13069396 13069442 11 137 7.5 3.5 5.5 1.7 185 chr2L 13069257 intergenic not near genes chr2L 13069350 intergenic not near genes chr2L 13069442 intergenic not near genes chr2L_11_13065001 chr2L_13065001 RAL-370 375 chr2L 13077549 13077599 chr2L 13078163 13078213 19 614 6.0 4.5 5.2 3.1 664 chr2L 13077549 intergenic not near genes chr2L 13077881 intergenic not near genes chr2L 13078213 intergenic not near genes chr2L_19_13075001 chr2L_13075001 RAL-370 376 chr2L 13122864 13122917 chr2L 13122963 13123018 13 99 4.0 2.5 3.2 3.1 154 chr2L 13122864 intergenic not near genes chr2L 13122941 intergenic not near genes chr2L 13123018 intergenic not near genes chr2L_13_13120001 chr2L_13120001 RAL-370 377 chr2L 13152208 13152259 chr2L 13152306 13152332 17 94 3.5 4.0 3.8 3.5 124 chr2L 13152208 intergenic not near genes chr2L 13152270 intergenic not near genes chr2L 13152332 intergenic not near genes chr2L_17_13150001 chr2L_13150001 RAL-370 378 chr2L 13176004 13176026 chr2L 13176104 13176126 7 100 3.5 5.5 4.5 1.3 122 chr2L 13176004 intron Sfmbt - chr2L 13176065 intron Sfmbt - chr2L 13176126 intron Sfmbt - chr2L_7_13175001 chr2L_13175001 RAL-370 379 chr2L 13204297 13204320 chr2L 13204416 13204424 4 113 7.0 3.0 5.0 0.7 127 chr2L 13204297 intron Pect + chr2L 13204360 intron Pect + chr2L 13204424 intron Pect + chr2L_4_13200001 chr2L_13200001 RAL-370 380 chr2L 13215368 13215408 chr2L 13215663 13215703 13 294 3.0 5.0 4.0 2.6 335 chr2L 13215368 intergenic kek4 -,snRNA:U2:34ABb +,snRNA:U2:34ABc + chr2L 13215536 intergenic kek4 -,snRNA:U2:34ABb +,snRNA:U2:34ABc + chr2L 13215703 intergenic snRNA:U2:34ABb +,snRNA:U2:34ABc +,kek4 - chr2L_13_13215001 chr2L_13215001 RAL-370 381 chr2L 13241343 13241390 chr2L 13241461 13241509 10 119 1.5 2.0 1.8 3.6 166 chr2L 13241343 intron CG5945 + chr2L 13241426 intron CG5945 + chr2L 13241509 exon CG5945 + chr2L_10_13240001 chr2L_13240001 RAL-370 382 chr2L 13241945 13241988 chr2L 13244343 13244352 BS 4 2392 5.0 5.0 5.0 0.7 2407 chr2L 13241945 5` UTR CR45330 + chr2L 13243148 intron CR45330 + chr2L 13244352 5` UTR CR45330 + chr2L_4_13240001 chr2L_13240001 RAL-370 383 chr2L 13349226 13349273 chr2L 13349343 13349394 12 120 2.0 3.0 2.5 3.4 168 chr2L 13349226 intergenic CG16826 + chr2L 13349310 intergenic CG16826 + chr2L 13349394 intergenic CG16826 +,CG9395 - chr2L_12_13345001 chr2L_13345001 RAL-370 384 chr2L 13362839 13362858 chr2L 13363058 13363078 4 220 3.5 2.5 3.0 1.0 239 chr2L 13362839 intergenic Nnp-1 - chr2L 13362958 intergenic Nnp-1 - chr2L 13363078 intergenic Nnp-1 - chr2L_4_13360001 chr2L_13360001 RAL-370 385 chr2L 13398702 13398748 chr2L 13398802 13398848 9 100 1.5 3.0 2.2 2.8 146 chr2L 13398702 intergenic CG10859 -,CR44600 -,CG7110 + chr2L 13398775 intergenic CR44600 -,CG10859 -,CG7110 + chr2L 13398848 intergenic CR44600 -,CG7110 +,CG10859 - chr2L_9_13395001 chr2L_13395001 RAL-370 386 chr2L 13405635 13405674 chr2L 13410444 13410491 Doc 15 4816 2.5 4.5 3.5 3.3 4856 chr2L 13405635 exon CG7110 + chr2L 13408063 intron CG7110 + chr2L 13410491 intron CG7110 + chr2L_15_13405001 chr2L_13405001 RAL-370 387 chr2L 13422486 13422502 chr2L 13422583 13422601 6 99 0.0 10.5 5.2 1.0 115 chr2L 13422486 intron CG42784 + chr2L 13422544 intron CG42784 + chr2L 13422601 intron CG42784 + chr2L_6_13420001 chr2L_13420001 RAL-370 388 chr2L 13449454 13449493 chr2L 13456910 13456949 Quasimodo 15 7456 0.0 6.5 3.2 3.6 7495 chr2L 13449454 intron,5` UTR CG42784 +,Hsp60D - chr2L 13453202 intron CG42784 + chr2L 13456949 intron CG42784 + chr2L_15_13450001 chr2L_13450001 RAL-370 389 chr2L 13481447 13481458 chr2L 13482063 13482085 jockey 4 624 14.5 7.5 11.0 0.3 638 chr2L 13481447 intron CG42784 + chr2L 13481766 intron CG42784 + chr2L 13482085 intron CG42784 + chr2L_4_13480001 chr2L_13480001 RAL-370 390 chr2L 13556397 13556430 chr2L 13556493 13556521 11 93 3.5 2.0 2.8 2.9 124 chr2L 13556397 intron kuz + chr2L 13556459 intron kuz + chr2L 13556521 intron kuz + chr2L_11_13555001 chr2L_13555001 RAL-370 391 chr2L 13560385 13560420 chr2L 13565224 13565261 F-element 16 4840 1.5 4.0 2.8 4.2 4876 chr2L 13560385 intron kuz + chr2L 13562823 intron kuz + chr2L 13565261 intron kuz + chr2L_16_13560001 chr2L_13560001 RAL-370 392 chr2L 13604764 13604781 chr2L 13604851 13604862 7 100 6.0 7.0 6.5 0.9 98 chr2L 13604764 intron kuz + chr2L 13604813 intron kuz + chr2L 13604862 intron kuz + chr2L_7_13600001 chr2L_13600001 RAL-370 393 chr2L 13693002 13693040 chr2L 13693097 13693110 8 92 3.5 5.5 4.5 1.5 108 chr2L 13693002 intron CG31814 - chr2L 13693056 intron CG31814 - chr2L 13693110 intron CG31814 - chr2L_8_13690001 chr2L_13690001 RAL-370 394 chr2L 13713240 13713535 chr2L 13713372 13713631 9 123 5.5 3.5 4.5 1.6 391 chr2L 13713240 intron CG31814 - chr2L 13713436 intron CG31814 - chr2L 13713631 intron CG31814 - chr2L_9_13710001 chr2L_13710001 RAL-370 395 chr2L 13713540 13713572 chr2L 13713635 13713668 5 96 1.5 0.0 0.8 2.8 128 chr2L 13713540 intron CG31814 - chr2L 13713604 intron CG31814 - chr2L 13713668 intron CG31814 - chr2L_5_13710001 chr2L_13710001 RAL-370 396 chr2L 13720055 13720084 chr2L 13720185 13720212 9 130 4.5 2.0 3.2 2.1 157 chr2L 13720055 intergenic not near genes chr2L 13720134 intergenic not near genes chr2L 13720212 intergenic not near genes chr2L_9_13720001 chr2L_13720001 RAL-370 397 chr2L 13733753 13733785 chr2L 13733891 13733923 15 137 2.0 1.5 1.8 5.4 170 chr2L 13733753 intergenic not near genes chr2L 13733838 intergenic not near genes chr2L 13733923 intergenic not near genes chr2L_15_13730001 chr2L_13730001 RAL-370 398 chr2L 13740076 13740093 chr2L 13740153 13740193 5 95 0.0 7.0 3.5 1.1 117 chr2L 13740076 intergenic not near genes chr2L 13740134 intergenic not near genes chr2L 13740193 intergenic not near genes chr2L_5_13740001 chr2L_13740001 RAL-370 399 chr2L 13761281 13761314 chr2L 13761370 13761389 8 93 4.0 5.0 4.5 1.5 108 chr2L 13761281 intron TM9SF4 + chr2L 13761335 intron TM9SF4 + chr2L 13761389 intron TM9SF4 + chr2L_8_13760001 chr2L_13760001 RAL-370 400 chr2L 13761788 13761837 chr2L 13762915 13762925 Doc 12 1125 4.0 3.0 3.5 2.7 1137 chr2L 13761788 intron TM9SF4 + chr2L 13762356 intron TM9SF4 + chr2L 13762925 intron TM9SF4 + chr2L_12_13760001 chr2L_13760001 RAL-370 401 chr2L 13842114 13842164 chr2L 13842217 13842268 9 104 2.0 1.0 1.5 3.6 154 chr2L 13842114 intron CenG1A + chr2L 13842191 intron CenG1A + chr2L 13842268 intron CenG1A + chr2L_9_13840001 chr2L_13840001 RAL-370 402 chr2L 13853068 13853079 chr2L 13862238 13862249 roo 7 9170 11.5 4.5 8.0 0.8 9181 chr2L 13853068 intron CenG1A + chr2L 13857658 intron CenG1A + chr2L 13862249 intron CenG1A + chr2L_7_13855001 chr2L_13855001 RAL-370 403 chr2L 13853082 13853098 chr2L 13862237 13862268 roo 9 9167 7.5 4.5 6.0 1.3 9186 chr2L 13853082 intron CenG1A + chr2L 13857675 intron CenG1A + chr2L 13862268 intron CenG1A + chr2L_9_13855001 chr2L_13855001 RAL-370 404 chr2L 13875834 13875855 chr2L 13875936 13875953 6 102 3.5 0.0 1.8 2.1 119 chr2L 13875834 intron CenG1A + chr2L 13875894 intron CenG1A + chr2L 13875953 intron CenG1A + chr2L_6_13875001 chr2L_13875001 RAL-370 405 chr2L 13988260 13988302 chr2L 13988367 13988408 11 107 2.5 4.5 3.5 2.4 148 chr2L 13988260 intron rk - chr2L 13988334 intron rk - chr2L 13988408 intron rk - chr2L_11_13985001 chr2L_13985001 RAL-370 406 chr2L 14109502 14109543 chr2L 14109613 14109653 6 111 3.0 2.0 2.5 1.7 151 chr2L 14109502 intergenic CG15293 -,CG31769 - chr2L 14109578 intergenic CG31769 -,CG15293 - chr2L 14109653 3` UTR CG31769 - chr2L_6_14105001 chr2L_14105001 RAL-370 407 chr2L 14118643 14118653 chr2L 14118761 14118772 7 118 11.5 4.5 8.0 0.8 129 chr2L 14118643 intergenic not near genes chr2L 14118708 intergenic not near genes chr2L 14118772 intergenic not near genes chr2L_7_14115001 chr2L_14115001 RAL-370 408 chr2L 14118658 14118690 chr2L 14118760 14118809 15 116 5.0 4.5 4.8 2.6 151 chr2L 14118658 intergenic not near genes chr2L 14118734 intergenic not near genes chr2L 14118809 intergenic not near genes chr2L_15_14115001 chr2L_14115001 RAL-370 409 chr2L 14151582 14151628 chr2L 14151671 14151724 10 96 2.0 4.5 3.2 2.4 142 chr2L 14151582 intron CG17341 + chr2L 14151653 intron CG17341 + chr2L 14151724 intron CG17341 + chr2L_10_14150001 chr2L_14150001 RAL-370 410 chr2L 14160678 14160704 chr2L 14160784 14160794 7 101 1.0 2.5 1.8 2.5 116 chr2L 14160678 intergenic CG17341 +,CG43332 - chr2L 14160736 intergenic CG17341 +,CG43332 - chr2L 14160794 intergenic CG17341 +,CG43332 - chr2L_7_14160001 chr2L_14160001 RAL-370 411 chr2L 14162126 14162138 chr2L 14162260 14162272 9 134 0.0 12.5 6.2 1.2 146 chr2L 14162126 exon CG43332 - chr2L 14162199 exon CG43332 - chr2L 14162272 exon CG43332 - chr2L_9_14160001 chr2L_14160001 RAL-370 412 chr2L 14222295 14222305 chr2L 14222401 14222412 4 104 5.5 5.0 5.2 0.6 117 chr2L 14222295 intron Dyrk2 - chr2L 14222354 intron Dyrk2 - chr2L 14222412 intron Dyrk2 - chr2L_4_14220001 chr2L_14220001 RAL-370 413 chr2L 14222309 14222329 chr2L 14222387 14222417 6 95 3.0 3.0 3.0 1.5 108 chr2L 14222309 intron Dyrk2 - chr2L 14222363 intron Dyrk2 - chr2L 14222417 intron Dyrk2 - chr2L_6_14220001 chr2L_14220001 RAL-370 414 chr2L 14236217 14236272 chr2L 14236334 14236389 11 116 3.5 0.5 2.0 3.7 172 chr2L 14236217 5` UTR CR44728 + chr2L 14236303 5` UTR CR44728 + chr2L 14236389 intergenic CR44728 + chr2L_11_14235001 chr2L_14235001 RAL-370 415 chr2L 14374768 14374797 chr2L 14374879 14374906 11 110 0.5 3.5 2.0 3.7 138 chr2L 14374768 intergenic not near genes chr2L 14374837 intergenic not near genes chr2L 14374906 intergenic not near genes chr2L_11_14370001 chr2L_14370001 RAL-370 416 chr2L 14378630 14378681 chr2L 14378729 14378735 20 96 3.0 0.5 1.8 7.1 105 chr2L 14378630 3` UTR ppk - chr2L 14378682 3` UTR ppk - chr2L 14378735 3` UTR ppk - chr2L_20_14375001 chr2L_14375001 RAL-370 417 chr2L 14396201 14396233 chr2L 14398970 14399009 9 2775 17.0 29.5 23.2 0.4 2808 chr2L 14396201 intron elB - chr2L 14397605 intron elB - chr2L 14399009 intron elB - chr2L_9_14395001 chr2L_14395001 RAL-370 418 chr2L 14396031 14396076 chr2L 14399120 14399165 22 3091 38.0 48.5 43.2 0.5 3134 chr2L 14396031 intron elB - chr2L 14397598 intron elB - chr2L 14399165 intron elB - chr2L_22_14395001 chr2L_14395001 RAL-370 419 chr2L 14429416 14429439 chr2L 14429517 14429540 10 101 4.5 4.0 4.2 1.9 124 chr2L 14429416 3` UTR CR44732 - chr2L 14429478 3` UTR CR44732 - chr2L 14429540 3` UTR CR44732 - chr2L_10_14425001 chr2L_14425001 RAL-370 420 chr2L 14462710 14462822 chr2L 14462817 14462938 5 112 0.0 0.0 0.0 5.0 228 chr2L 14462710 intergenic not near genes chr2L 14462824 intergenic not near genes chr2L 14462938 intergenic not near genes chr2L_5_14460001 chr2L_14460001 RAL-370 421 chr2L 14503414 14503434 chr2L 14503513 14503533 8 99 3.5 4.0 3.8 1.7 119 chr2L 14503414 intergenic not near genes chr2L 14503474 intergenic not near genes chr2L 14503533 intergenic not near genes chr2L_8_14500001 chr2L_14500001 RAL-370 422 chr2L 14524610 14524651 chr2L 14525114 14525169 11 511 1.0 2.5 1.8 3.9 559 chr2L 14524610 intron CG33648 + chr2L 14524890 intron CG33648 + chr2L 14525169 exon CG33648 + chr2L_11_14520001 chr2L_14520001 RAL-370 423 chr2L 14554145 14554194 chr2L 14554241 14554264 17 93 4.0 4.0 4.0 3.4 119 chr2L 14554145 intergenic not near genes chr2L 14554204 intergenic not near genes chr2L 14554264 intergenic not near genes chr2L_17_14550001 chr2L_14550001 RAL-370 424 chr2L 14555126 14555155 chr2L 14555225 14555254 6 99 6.5 5.5 6.0 0.9 128 chr2L 14555126 intergenic not near genes chr2L 14555190 intergenic not near genes chr2L 14555254 intergenic not near genes chr2L_6_14555001 chr2L_14555001 RAL-370 425 chr2L 14588366 14588419 chr2L 14588540 14588593 18 171 5.5 4.5 5.0 3.0 227 chr2L 14588366 intergenic CG42680 - chr2L 14588480 intergenic CG42680 - chr2L 14588593 intergenic CG42680 - chr2L_18_14585001 chr2L_14585001 RAL-370 426 chr2L 14642554 14642604 chr2L 14651737 14651755 roo 14 9178 6.5 4.5 5.5 2.2 9201 chr2L 14642554 intron osp - chr2L 14647154 intron osp - chr2L 14651755 intron osp - chr2L_14_14645001 chr2L_14645001 RAL-370 427 chr2L 14707196 14707233 chr2L 14707332 14707372 18 136 4.5 0.0 2.2 5.6 176 chr2L 14707196 intergenic not near genes chr2L 14707284 intergenic not near genes chr2L 14707372 intergenic not near genes chr2L_18_14705001 chr2L_14705001 RAL-370 428 chr2L 14715517 14715567 chr2L 14715627 14715677 15 108 4.5 7.5 6.0 2.1 160 chr2L 14715517 intergenic not near genes chr2L 14715597 intergenic not near genes chr2L 14715677 intergenic not near genes chr2L_15_14715001 chr2L_14715001 RAL-370 429 chr2L 14747768 14747781 chr2L 14747879 14747892 4 111 0.0 10.5 5.2 0.6 124 chr2L 14747768 intergenic not near genes chr2L 14747830 intergenic not near genes chr2L 14747892 intergenic not near genes chr2L_4_14745001 chr2L_14745001 RAL-370 430 chr2L 14768914 14768957 chr2L 14769012 14769055 10 98 0.0 3.0 1.5 4.0 141 chr2L 14768914 intergenic not near genes chr2L 14768984 intergenic not near genes chr2L 14769055 intergenic not near genes chr2L_10_14765001 chr2L_14765001 RAL-370 431 chr2L 14769347 14769385 chr2L 14769526 14769564 13 179 5.0 4.0 4.5 2.4 217 chr2L 14769347 intergenic not near genes chr2L 14769456 intergenic not near genes chr2L 14769564 intergenic not near genes chr2L_13_14765001 chr2L_14765001 RAL-370 432 chr2L 14772687 14772716 chr2L 14772806 14772835 4 118 3.5 1.0 2.2 1.2 148 chr2L 14772687 intergenic not near genes chr2L 14772761 intergenic not near genes chr2L 14772835 intergenic not near genes chr2L_4_14770001 chr2L_14770001 RAL-370 433 chr2L 14803862 14803910 chr2L 14809085 14809103 copia 17 5220 3.5 8.0 5.8 2.5 5241 chr2L 14803862 intergenic not near genes chr2L 14806482 intergenic not near genes chr2L 14809103 intergenic not near genes chr2L_17_14805001 chr2L_14805001 RAL-370 434 chr2L 14816345 14816398 chr2L 14816452 14816479 5 100 4.5 6.0 5.2 0.8 134 chr2L 14816345 intergenic not near genes chr2L 14816412 intergenic not near genes chr2L 14816479 intergenic not near genes chr2L_5_14815001 chr2L_14815001 RAL-370 435 chr2L 14905722 14905762 chr2L 14905839 14905879 7 116 2.0 0.0 1.0 3.5 157 chr2L 14905722 intergenic not near genes chr2L 14905800 intergenic not near genes chr2L 14905879 intergenic not near genes chr2L_7_14905001 chr2L_14905001 RAL-370 436 chr2L 14923090 14923136 chr2L 14923188 14923236 17 99 4.5 2.5 3.5 3.8 146 chr2L 14923090 intron CG42313 - chr2L 14923163 intron CG42313 - chr2L 14923236 intron CG42313 - chr2L_17_14920001 chr2L_14920001 RAL-370 437 chr2L 14961683 14961731 chr2L 14962022 14962032 15 330 3.0 3.5 3.2 3.6 349 chr2L 14961683 intron CG42313 - chr2L 14961858 intron CG42313 - chr2L 14962032 intron CG42313 - chr2L_15_14960001 chr2L_14960001 RAL-370 438 chr2L 14984386 14984405 chr2L 14991987 14992026 opus 5 7617 5.5 5.0 5.2 0.8 7640 chr2L 14984386 intron mol - chr2L 14988206 intron mol - chr2L 14992026 intron mol - chr2L_5_14985001 chr2L_14985001 RAL-370 439 chr2L 15013137 15013181 chr2L 15013261 15013310 7 127 1.5 4.0 2.8 1.8 173 chr2L 15013137 intergenic CR43856 - chr2L 15013224 intergenic not near genes chr2L 15013310 intergenic not near genes chr2L_7_15010001 chr2L_15010001 RAL-370 440 chr2L 15021421 15021467 chr2L 15021517 15021563 16 96 5.0 3.5 4.2 3.1 142 chr2L 15021421 intron GABA-B-R1 + chr2L 15021492 intron GABA-B-R1 + chr2L 15021563 intron GABA-B-R1 + chr2L_16_15020001 chr2L_15020001 RAL-370 441 chr2L 15044700 15044716 chr2L 15044796 15044812 5 96 6.5 0.0 3.2 1.2 112 chr2L 15044700 intergenic ck - chr2L 15044756 intergenic ck - chr2L 15044812 intergenic ck - chr2L_5_15040001 chr2L_15040001 RAL-370 442 chr2L 15044723 15044741 chr2L 15044786 15044826 4 85 2.5 0.0 1.2 1.8 103 chr2L 15044723 intergenic ck - chr2L 15044774 intergenic ck - chr2L 15044826 intergenic ck - chr2L_4_15040001 chr2L_15040001 RAL-370 443 chr2L 15078057 15078102 chr2L 15078156 15078210 9 101 2.0 1.5 1.8 3.2 153 chr2L 15078057 intron CG15270 + chr2L 15078134 intron CG15270 + chr2L 15078210 intron CG15270 + chr2L_9_15075001 chr2L_15075001 RAL-370 444 chr2L 15079890 15079933 chr2L 15080001 15080046 8 112 3.0 5.0 4.0 1.6 156 chr2L 15079890 intron CG15270 + chr2L 15079968 intron CG15270 + chr2L 15080046 intron CG15270 + chr2L_8_15075001 chr2L_15075001 RAL-370 445 chr2L 15082639 15082686 chr2L 15082753 15082799 18 114 6.5 3.0 4.8 3.1 160 chr2L 15082639 intron CG15270 + chr2L 15082719 intron CG15270 + chr2L 15082799 intron CG15270 + chr2L_18_15080001 chr2L_15080001 RAL-370 446 chr2L 15087734 15087764 chr2L 15087864 15087893 9 129 1.5 5.0 3.2 2.1 159 chr2L 15087734 exon CG15270 + chr2L 15087814 intron CG15270 + chr2L 15087893 intron CG15270 + chr2L_9_15085001 chr2L_15085001 RAL-370 447 chr2L 15122790 15122804 chr2L 15122890 15122904 5 100 0.0 4.0 2.0 1.7 114 chr2L 15122790 intergenic not near genes chr2L 15122847 intergenic not near genes chr2L 15122904 intergenic not near genes chr2L_5_15120001 chr2L_15120001 RAL-370 448 chr2L 15226352 15226392 chr2L 15226448 15226466 6 92 4.0 3.5 3.8 1.2 114 chr2L 15226352 intergenic not near genes chr2L 15226409 intergenic not near genes chr2L 15226466 intergenic not near genes chr2L_6_15225001 chr2L_15225001 RAL-370 449 chr2L 15247297 15247324 chr2L 15247377 15247411 4 92 1.5 4.5 3.0 1.0 114 chr2L 15247297 intron ZnT35C - chr2L 15247354 intron ZnT35C - chr2L 15247411 intron ZnT35C - chr2L_4_15245001 chr2L_15245001 RAL-370 450 chr2L 15446032 15446079 chr2L 15453519 15453568 blood 7 7484 2.0 5.0 3.5 1.6 7536 chr2L 15446032 intergenic not near genes chr2L 15449800 intergenic not near genes chr2L 15453568 intergenic not near genes chr2L_7_15445001 chr2L_15445001 RAL-370 451 chr2L 15476394 15476412 chr2L 15476573 15476591 4 179 0.0 4.0 2.0 1.3 197 chr2L 15476394 intergenic sna - chr2L 15476492 intergenic sna - chr2L 15476591 intergenic sna - chr2L_4_15475001 chr2L_15475001 RAL-370 452 chr2L 15500051 15500063 chr2L 15500150 15500153 5 97 2.0 6.0 4.0 1.0 102 chr2L 15500051 intron lace + chr2L 15500102 intron lace + chr2L 15500153 intron lace + chr2L_5_15500001 chr2L_15500001 RAL-370 453 chr2L 15500810 15500858 chr2L 15500907 15500955 6 97 5.0 7.0 6.0 0.9 145 chr2L 15500810 intron lace + chr2L 15500882 intron lace + chr2L 15500955 intron lace + chr2L_6_15500001 chr2L_15500001 RAL-370 454 chr2L 15514304 15514330 chr2L 15514407 15514421 7 101 14.5 7.0 10.8 0.6 117 chr2L 15514304 intergenic not near genes chr2L 15514362 intergenic not near genes chr2L 15514421 intergenic not near genes chr2L_7_15510001 chr2L_15510001 RAL-370 455 chr2L 15527413 15527456 chr2L 15527511 15527555 8 97 0.0 3.0 1.5 3.2 142 chr2L 15527413 intergenic not near genes chr2L 15527484 intergenic not near genes chr2L 15527555 intergenic not near genes chr2L_8_15525001 chr2L_15525001 RAL-370 456 chr2L 15565814 15565859 chr2L 15565916 15565961 10 102 6.0 5.0 5.5 1.5 147 chr2L 15565814 intron kek3 + chr2L 15565888 intron kek3 + chr2L 15565961 intron kek3 + chr2L_10_15565001 chr2L_15565001 RAL-370 457 chr2L 15586394 15586440 chr2L 15593464 15593512 297 14 7072 2.5 4.0 3.2 3.3 7118 chr2L 15586394 intergenic not near genes chr2L 15589953 intergenic not near genes chr2L 15593512 intergenic not near genes chr2L_14_15585001 chr2L_15585001 RAL-370 458 chr2L 15598774 15598798 chr2L 15598873 15598897 6 99 4.5 0.0 2.2 1.9 123 chr2L 15598774 intergenic not near genes chr2L 15598836 intergenic not near genes chr2L 15598897 intergenic not near genes chr2L_6_15595001 chr2L_15595001 RAL-370 459 chr2L 15730880 15730891 chr2L 15730977 15730996 4 103 4.5 4.5 4.5 0.7 116 chr2L 15730880 intron CycE - chr2L 15730938 intron CycE - chr2L 15730996 intron CycE - chr2L_4_15730001 chr2L_15730001 RAL-370 460 chr2L 15761099 15761105 chr2L 15761199 15761205 5 100 0.0 5.5 2.8 1.3 106 chr2L 15761099 intron Gli - chr2L 15761152 intron Gli - chr2L 15761205 intron Gli - chr2L_5_15760001 chr2L_15760001 RAL-370 461 chr2L 15776202 15776246 chr2L 15776553 15776601 10 344 2.5 2.5 2.5 2.9 399 chr2L 15776202 intergenic CG43760 - chr2L 15776402 intergenic CG43760 - chr2L 15776601 exon CG43760 - chr2L_10_15775001 chr2L_15775001 RAL-370 462 chr2L 15799028 15799053 chr2L 15799189 15799216 4 162 0.0 3.0 1.5 1.6 188 chr2L 15799028 intergenic not near genes chr2L 15799122 intergenic not near genes chr2L 15799216 intergenic not near genes chr2L_4_15795001 chr2L_15795001 RAL-370 463 chr2L 15814009 15814037 chr2L 15814116 15814144 6 107 0.0 0.5 0.2 5.0 135 chr2L 15814009 intergenic not near genes chr2L 15814076 intergenic not near genes chr2L 15814144 intergenic not near genes chr2L_6_15810001 chr2L_15810001 RAL-370 464 chr2L 15823336 15823372 chr2L 15823432 15823468 5 96 3.0 1.5 2.2 1.6 132 chr2L 15823336 intergenic CR44601 - chr2L 15823402 intergenic CR44601 - chr2L 15823468 intergenic not near genes chr2L_5_15820001 chr2L_15820001 RAL-370 465 chr2L 15915650 15915684 chr2L 15915735 15915773 13 92 5.5 5.5 5.5 2.0 123 chr2L 15915650 intron beat-Ib - chr2L 15915712 intron beat-Ib - chr2L 15915773 intron beat-Ib - chr2L_13_15915001 chr2L_15915001 RAL-370 466 chr2L 15950365 15950414 chr2L 15950463 15950511 10 96 0.0 1.5 0.8 5.6 146 chr2L 15950365 intron beat-Ib - chr2L 15950438 intron beat-Ib - chr2L 15950511 intron beat-Ib - chr2L_10_15950001 chr2L_15950001 RAL-370 467 chr2L 15954167 15954206 chr2L 15954264 15954307 12 99 4.5 3.0 3.8 2.5 140 chr2L 15954167 intron beat-Ib - chr2L 15954237 intron beat-Ib - chr2L 15954307 intron beat-Ib - chr2L_12_15950001 chr2L_15950001 RAL-370 468 chr2L 15954519 15954547 chr2L 15954710 15954720 10 189 6.0 5.0 5.5 1.5 201 chr2L 15954519 intron beat-Ib - chr2L 15954620 intron beat-Ib - chr2L 15954720 intron beat-Ib - chr2L_10_15950001 chr2L_15950001 RAL-370 469 chr2L 15956004 15956058 chr2L 15957491 15957501 hobo 17 1481 5.0 6.5 5.8 2.5 1497 chr2L 15956004 intron beat-Ib - chr2L 15956752 intron beat-Ib - chr2L 15957501 intron beat-Ib - chr2L_17_15955001 chr2L_15955001 RAL-370 470 chr2L 16001447 16001488 chr2L 16001555 16001596 12 107 0.0 3.5 1.8 4.3 149 chr2L 16001447 intron beat-Ic + chr2L 16001522 intron beat-Ic + chr2L 16001596 intron beat-Ic + chr2L_12_16000001 chr2L_16000001 RAL-370 471 chr2L 16005620 16005649 chr2L 16005748 16005778 5 129 1.5 4.5 3.0 1.2 158 chr2L 16005620 intron beat-Ic + chr2L 16005699 intron beat-Ic + chr2L 16005778 intron beat-Ic + chr2L_5_16005001 chr2L_16005001 RAL-370 472 chr2L 16051589 16051640 chr2L 16051687 16051737 11 98 1.0 3.0 2.0 3.7 148 chr2L 16051589 intron beat-Ia + chr2L 16051663 intron beat-Ia + chr2L 16051737 intron beat-Ia + chr2L_11_16050001 chr2L_16050001 RAL-370 473 chr2L 16058109 16058150 chr2L 16058270 16058311 13 160 5.0 2.5 3.8 2.7 202 chr2L 16058109 intron beat-Ia + chr2L 16058210 intron beat-Ia + chr2L 16058311 intron beat-Ia + chr2L_13_16055001 chr2L_16055001 RAL-370 474 chr2L 16059940 16059975 chr2L 16060058 16060091 4 118 1.5 2.5 2.0 1.3 151 chr2L 16059940 intron beat-Ia + chr2L 16060016 intron beat-Ia + chr2L 16060091 intron beat-Ia + chr2L_4_16060001 chr2L_16060001 RAL-370 475 chr2L 8578452 8578452 chr2L 16071771 16071771 4 7493319 16.0 19.0 17.5 0.2 7493319 chr2L 8578452 intron Sema-1a + chr2L 12325112 intergenic not near genes chr2L 16071771 intron beat-Ia + chr2L_4_12325001 chr2L_12325001 RAL-370 476 chr2L 16071771 16071771 chr2L 16217660 16217660 copia 5 145889 20.5 23.5 22.0 0.2 145889 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_5_16140001 chr2L_16140001 RAL-370 477 chr2L 16141147 16141180 chr2L 16146374 16146407 copia 7 5227 7.0 2.5 4.8 1.2 5260 chr2L 16141147 intergenic not near genes chr2L 16143777 intergenic not near genes chr2L 16146407 intergenic not near genes chr2L_7_16140001 chr2L_16140001 RAL-370 478 chr2L 16153727 16153748 chr2L 16160814 16160836 297 6 7088 4.5 2.5 3.5 1.3 7109 chr2L 16153727 intergenic not near genes chr2L 16157282 intergenic not near genes chr2L 16160836 intergenic not near genes chr2L_6_16155001 chr2L_16155001 RAL-370 479 chr2L 9084336 9084339 chr2L 16217660 16217660 9 7133322 14.0 23.5 18.8 0.5 7133324 chr2L 9084336 intron Toll-4 + chr2L 12650998 intergenic not near genes chr2L 16217660 intergenic not near genes chr2L_9_12650001 chr2L_12650001 RAL-370 480 chr2L 16071771 16071771 chr2L 16217660 16217661 copia 4 145889 20.5 23.5 22.0 0.2 145890 chr2L 16071771 intron beat-Ia + chr2L 16144716 intergenic not near genes chr2L 16217661 intergenic not near genes chr2L_4_16140001 chr2L_16140001 RAL-370 481 chr2L 16224787 16224827 chr2L 16224911 16224924 13 125 2.5 1.0 1.8 4.6 137 chr2L 16224787 intergenic not near genes chr2L 16224856 intergenic not near genes chr2L 16224924 intergenic not near genes chr2L_13_16220001 chr2L_16220001 RAL-370 482 chr2L 16242082 16242090 chr2L 16242165 16242201 4 104 3.5 0.0 1.8 1.4 119 chr2L 16242082 exon CG42818 + chr2L 16242142 exon CG42818 + chr2L 16242201 exon CG42818 + chr2L_4_16240001 chr2L_16240001 RAL-370 483 chr2L 16243679 16243834 chr2L 16243778 16243949 11 109 2.5 2.5 2.5 3.1 270 chr2L 16243679 exon CG42818 + chr2L 16243814 exon CG42818 + chr2L 16243949 exon CG42818 + chr2L_11_16240001 chr2L_16240001 RAL-370 484 chr2L 16263970 16264021 chr2L 16264078 16264132 6 105 3.0 3.5 3.2 1.4 162 chr2L 16263970 3` UTR crp - chr2L 16264051 3` UTR crp - chr2L 16264132 3` UTR crp - chr2L_6_16260001 chr2L_16260001 RAL-370 485 chr2L 16280241 16280286 chr2L 16281425 16281430 1360 7 1176 4.5 3.5 4.0 1.4 1189 chr2L 16280241 intron crp - chr2L 16280836 intron crp - chr2L 16281430 intron crp - chr2L_7_16280001 chr2L_16280001 RAL-370 486 chr2L 16354761 16354780 chr2L 16354873 16354892 6 112 2.5 5.0 3.8 1.2 131 chr2L 16354761 intergenic CaBP1 -,CG4455 + chr2L 16354826 intergenic CaBP1 -,CG4455 + chr2L 16354892 3` UTR CaBP1 - chr2L_6_16350001 chr2L_16350001 RAL-370 487 chr2L 16363925 16363969 chr2L 16364191 16364234 6 266 2.0 3.0 2.5 1.7 309 chr2L 16363925 intergenic not near genes chr2L 16364080 intergenic not near genes chr2L 16364234 intergenic not near genes chr2L_6_16360001 chr2L_16360001 RAL-370 488 chr2L 16434086 16434131 chr2L 16434188 16434233 6 101 3.5 2.0 2.8 1.6 147 chr2L 16434086 intron CG5888 - chr2L 16434160 intron CG5888 - chr2L 16434233 intron CG5888 - chr2L_6_16430001 chr2L_16430001 RAL-370 489 chr2L 16537306 16537355 chr2L 16537402 16537451 5 96 3.5 5.5 4.5 0.9 145 chr2L 16537306 intergenic not near genes chr2L 16537378 intergenic not near genes chr2L 16537451 intergenic not near genes chr2L_5_16535001 chr2L_16535001 RAL-370 490 chr2L 16694127 16694144 chr2L 16694219 16694247 6 100 7.0 4.5 5.8 0.9 120 chr2L 16694127 intron grp + chr2L 16694187 intron grp + chr2L 16694247 intron grp + chr2L_6_16690001 chr2L_16690001 RAL-370 491 chr2L 16939978 16940012 chr2L 16940070 16940109 7 92 2.0 5.5 3.8 1.5 131 chr2L 16939978 intergenic not near genes chr2L 16940044 intergenic not near genes chr2L 16940109 intergenic not near genes chr2L_7_16940001 chr2L_16940001 RAL-370 492 chr2L 16958083 16958126 chr2L 16962891 16962934 Doc 10 4807 3.0 3.5 3.2 2.4 4851 chr2L 16958083 intergenic not near genes chr2L 16960508 intergenic not near genes chr2L 16962934 intergenic not near genes chr2L_10_16960001 chr2L_16960001 RAL-370 493 chr2L 17000104 17000149 chr2L 17000245 17000291 8 142 6.0 4.5 5.2 1.3 187 chr2L 17000104 intergenic not near genes chr2L 17000198 intergenic not near genes chr2L 17000291 intergenic not near genes chr2L_8_17000001 chr2L_17000001 RAL-370 494 chr2L 17032482 17032519 chr2L 17032586 17032623 5 105 5.5 5.0 5.2 0.8 141 chr2L 17032482 intergenic not near genes chr2L 17032552 intergenic not near genes chr2L 17032623 intergenic not near genes chr2L_5_17030001 chr2L_17030001 RAL-370 495 chr2L 17087361 17087404 chr2L 17087496 17087542 10 134 3.0 2.0 2.5 2.9 181 chr2L 17087361 intergenic CG12620 + chr2L 17087452 intergenic CG12620 + chr2L 17087542 intergenic CG12620 + chr2L_10_17085001 chr2L_17085001 RAL-370 496 chr2L 17101889 17101914 chr2L 17101978 17102010 9 95 6.5 2.5 4.5 1.6 121 chr2L 17101889 intergenic not near genes chr2L 17101950 intergenic not near genes chr2L 17102010 intergenic not near genes chr2L_9_17100001 chr2L_17100001 RAL-370 497 chr2L 17102995 17103034 chr2L 17103103 17103142 11 105 2.0 3.0 2.5 3.1 147 chr2L 17102995 intergenic not near genes chr2L 17103068 intergenic not near genes chr2L 17103142 intergenic not near genes chr2L_11_17100001 chr2L_17100001 RAL-370 498 chr2L 17125454 17125484 chr2L 17125558 17125588 7 103 3.0 4.5 3.8 1.5 134 chr2L 17125454 exon CG31784 - chr2L 17125521 exon CG31784 - chr2L 17125588 exon CG31784 - chr2L_7_17125001 chr2L_17125001 RAL-370 499 chr2L 17158720 17158750 chr2L 17158843 17158873 8 123 3.5 5.5 4.5 1.5 153 chr2L 17158720 5` UTR,exon CG34106 +,beat-IIIa + chr2L 17158796 intron,intron CG34106 +,beat-IIIa + chr2L 17158873 intron,intron CG34106 +,beat-IIIa + chr2L_8_17155001 chr2L_17155001 RAL-370 500 chr2L 17168175 17168224 chr2L 17168973 17168979 14 794 2.5 2.5 2.5 4.0 804 chr2L 17168175 intron,intron CG34106 +,beat-IIIa + chr2L 17168577 intron,intron CG34106 +,beat-IIIa + chr2L 17168979 intron,intron CG34106 +,beat-IIIa + chr2L_14_17165001 chr2L_17165001 RAL-370 501 chr2L 17184782 17184832 chr2L 17185100 17185149 10 313 4.5 2.5 3.5 2.2 367 chr2L 17184782 intergenic not near genes chr2L 17184966 intergenic not near genes chr2L 17185149 intergenic not near genes chr2L_10_17180001 chr2L_17180001 RAL-370 502 chr2L 17199144 17199181 chr2L 17200631 17200667 hobo 7 1487 7.0 2.0 4.5 1.3 1523 chr2L 17199144 intron beat-IIIc - chr2L 17199906 intron beat-IIIc - chr2L 17200667 intron beat-IIIc - chr2L_7_17195001 chr2L_17195001 RAL-370 503 chr2L 17223769 17223818 chr2L 17223867 17223917 10 96 2.0 3.5 2.8 2.6 148 chr2L 17223769 intron beat-IIIc - chr2L 17223843 intron beat-IIIc - chr2L 17223917 intron beat-IIIc - chr2L_10_17220001 chr2L_17220001 RAL-370 504 chr2L 17273181 17273193 chr2L 17277983 17277996 F-element 6 4802 6.5 4.0 5.2 1.0 4815 chr2L 17273181 intergenic not near genes chr2L 17275588 intergenic not near genes chr2L 17277996 intergenic not near genes chr2L_6_17275001 chr2L_17275001 RAL-370 505 chr2L 17273195 17273229 chr2L 17277971 17277994 F-element 13 4793 3.0 3.0 3.0 3.2 4799 chr2L 17273195 intergenic not near genes chr2L 17275594 intergenic not near genes chr2L 17277994 intergenic not near genes chr2L_13_17275001 chr2L_17275001 RAL-370 506 chr2L 17300867 17300920 chr2L 17301129 17301182 13 261 2.5 4.5 3.5 2.9 315 chr2L 17300867 intergenic not near genes chr2L 17301024 intergenic not near genes chr2L 17301182 intergenic not near genes chr2L_13_17300001 chr2L_17300001 RAL-370 507 chr2L 17303425 17303437 chr2L 17303619 17303625 5 192 4.5 2.0 3.2 1.2 200 chr2L 17303425 intergenic not near genes chr2L 17303525 intergenic not near genes chr2L 17303625 intergenic not near genes chr2L_5_17300001 chr2L_17300001 RAL-370 508 chr2L 17303438 17303458 chr2L 17303618 17303633 7 185 2.5 1.5 2.0 2.3 195 chr2L 17303438 intergenic not near genes chr2L 17303536 intergenic not near genes chr2L 17303633 intergenic not near genes chr2L_7_17300001 chr2L_17300001 RAL-370 509 chr2L 17327893 17327923 chr2L 17327999 17328028 12 105 7.0 8.0 7.5 1.4 135 chr2L 17327893 intergenic not near genes chr2L 17327960 intergenic not near genes chr2L 17328028 intergenic not near genes chr2L_12_17325001 chr2L_17325001 RAL-370 510 chr2L 17360003 17360044 chr2L 17360201 17360243 10 198 2.0 0.0 1.0 5.0 240 chr2L 17360003 intergenic not near genes chr2L 17360123 intergenic not near genes chr2L 17360243 intergenic not near genes chr2L_10_17360001 chr2L_17360001 RAL-370 511 chr2L 17377261 17377314 chr2L 17377377 17377413 20 112 4.0 4.5 4.2 3.8 152 chr2L 17377261 intron Lrch - chr2L 17377337 intron Lrch - chr2L 17377413 intron Lrch - chr2L_20_17375001 chr2L_17375001 RAL-370 512 chr2L 17379695 17379703 chr2L 17379763 17379806 5 96 2.0 0.0 1.0 2.5 111 chr2L 17379695 intron Lrch - chr2L 17379750 intron Lrch - chr2L 17379806 intron Lrch - chr2L_5_17375001 chr2L_17375001 RAL-370 513 chr2L 17425751 17425792 chr2L 17425895 17425939 9 146 2.5 4.0 3.2 2.1 188 chr2L 17425751 intron Dif - chr2L 17425845 intron Dif - chr2L 17425939 intron Dif - chr2L_9_17425001 chr2L_17425001 RAL-370 514 chr2L 17432635 17432664 chr2L 17432708 17432760 11 88 3.0 5.0 4.0 2.2 125 chr2L 17432635 intron Dif - chr2L 17432698 intron Dif - chr2L 17432760 intron Dif - chr2L_11_17430001 chr2L_17430001 RAL-370 515 chr2L 17517839 17517874 chr2L 17517938 17517949 15 100 6.0 6.0 6.0 2.1 110 chr2L 17517839 intron Dhc36C + chr2L 17517894 intron Dhc36C + chr2L 17517949 intron Dhc36C + chr2L_15_17515001 chr2L_17515001 RAL-370 516 chr2L 17543606 17543625 chr2L 17543695 17543737 8 99 6.0 10.5 8.2 0.9 131 chr2L 17543606 intergenic not near genes chr2L 17543672 intergenic not near genes chr2L 17543737 intergenic not near genes chr2L_8_17540001 chr2L_17540001 RAL-370 517 chr2L 17565359 17565388 chr2L 17565470 17565499 8 111 2.0 0.0 1.0 4.0 140 chr2L 17565359 intergenic not near genes chr2L 17565429 intergenic not near genes chr2L 17565499 intergenic not near genes chr2L_8_17565001 chr2L_17565001 RAL-370 518 chr2L 17675931 17675958 chr2L 17676030 17676049 4 96 2.5 2.0 2.2 1.2 118 chr2L 17675931 intron CadN - chr2L 17675990 intron CadN - chr2L 17676049 intron CadN - chr2L_4_17675001 chr2L_17675001 RAL-370 519 chr2L 17687500 17687522 chr2L 17692265 17692286 F-element 8 4765 2.0 3.5 2.8 2.1 4786 chr2L 17687500 intron CadN - chr2L 17689893 intron CadN - chr2L 17692286 intron CadN - chr2L_8_17685001 chr2L_17685001 RAL-370 520 chr2L 17692929 17692976 chr2L 17693063 17693110 12 133 5.5 5.5 5.5 1.8 181 chr2L 17692929 intron CadN - chr2L 17693020 intron CadN - chr2L 17693110 intron CadN - chr2L_12_17690001 chr2L_17690001 RAL-370 521 chr2L 17703645 17703683 chr2L 17703737 17703794 13 107 3.5 2.0 2.8 3.4 149 chr2L 17703645 intron CadN - chr2L 17703720 intron CadN - chr2L 17703794 intron CadN - chr2L_13_17700001 chr2L_17700001 RAL-370 522 chr2L 17709099 17709151 chr2L 17709203 17709254 20 103 4.5 5.0 4.8 3.4 155 chr2L 17709099 intron CadN - chr2L 17709176 intron CadN - chr2L 17709254 intron CadN - chr2L_20_17705001 chr2L_17705001 RAL-370 523 chr2L 17723769 17723800 chr2L 17723882 17723913 6 113 2.5 3.0 2.8 1.6 144 chr2L 17723769 intron CadN - chr2L 17723841 intron CadN - chr2L 17723913 intron CadN - chr2L_6_17720001 chr2L_17720001 RAL-370 524 chr2L 17727852 17727882 chr2L 17729335 17729368 hobo 6 1485 2.5 10.0 6.2 0.8 1516 chr2L 17727852 intron CadN - chr2L 17728610 intron CadN - chr2L 17729368 intron CadN - chr2L_6_17725001 chr2L_17725001 RAL-370 525 chr2L 17741946 17741990 chr2L 17742042 17742086 12 96 4.0 6.5 5.2 1.9 140 chr2L 17741946 intron CadN - chr2L 17742016 intron CadN - chr2L 17742086 intron CadN - chr2L_12_17740001 chr2L_17740001 RAL-370 526 chr2L 17796008 17796044 chr2L 17796109 17796145 7 100 1.5 3.0 2.2 2.2 137 chr2L 17796008 intron CadN2 - chr2L 17796076 intron CadN2 - chr2L 17796145 intron CadN2 - chr2L_7_17795001 chr2L_17795001 RAL-370 527 chr2L 17819907 17819952 chr2L 17825130 17825175 copia 7 5216 0.5 4.5 2.5 2.0 5268 chr2L 17819907 intron CadN2 - chr2L 17822541 intron CadN2 - chr2L 17825175 intron CadN2 - chr2L_7_17820001 chr2L_17820001 RAL-370 528 chr2L 17879980 17880021 chr2L 17880087 17880128 11 106 3.5 4.0 3.8 2.3 148 chr2L 17879980 intergenic not near genes chr2L 17880054 intergenic not near genes chr2L 17880128 intergenic not near genes chr2L_11_17880001 chr2L_17880001 RAL-370 529 chr2L 17911939 17911990 chr2L 17914137 17914140 pogo 13 2189 1.5 5.5 3.5 2.9 2201 chr2L 17911939 intergenic not near genes chr2L 17913040 intergenic not near genes chr2L 17914140 intergenic CG43271 - chr2L_13_17910001 chr2L_17910001 RAL-370 530 chr2L 17933510 17933558 chr2L 17933921 17933969 12 410 3.0 3.5 3.2 2.9 459 chr2L 17933510 intergenic not near genes chr2L 17933740 intergenic not near genes chr2L 17933969 intergenic not near genes chr2L_12_17930001 chr2L_17930001 RAL-370 531 chr2L 17938670 17938719 chr2L 17938776 17938825 13 105 4.0 1.5 2.8 3.4 155 chr2L 17938670 intergenic CR44399 - chr2L 17938748 intergenic CR44399 - chr2L 17938825 intergenic CR44399 - chr2L_13_17935001 chr2L_17935001 RAL-370 532 chr2L 17943329 17943383 chr2L 17943620 17943632 22 287 3.0 5.5 4.2 4.2 303 chr2L 17943329 intergenic not near genes chr2L 17943480 intergenic not near genes chr2L 17943632 intergenic not near genes chr2L_22_17940001 chr2L_17940001 RAL-370 533 chr2L 17943872 17943919 chr2L 17943995 17944042 16 121 5.0 5.5 5.2 2.6 170 chr2L 17943872 intergenic not near genes chr2L 17943957 intergenic not near genes chr2L 17944042 intergenic not near genes chr2L_16_17940001 chr2L_17940001 RAL-370 534 chr2L 17951923 17951972 chr2L 17953410 17953459 hobo 23 1486 7.0 4.5 5.8 3.4 1536 chr2L 17951923 intergenic CR44398 -,CR44397 - chr2L 17952691 intergenic not near genes chr2L 17953459 intergenic not near genes chr2L_23_17950001 chr2L_17950001 RAL-370 535 chr2L 17989987 17990003 chr2L 17990075 17990086 7 89 7.0 4.0 5.5 1.1 99 chr2L 17989987 intergenic Prosbeta5R2 + chr2L 17990036 intergenic Prosbeta5R2 + chr2L 17990086 intergenic Prosbeta5R2 + chr2L_7_17990001 chr2L_17990001 RAL-370 536 chr2L 17990008 17990018 chr2L 17990070 17990114 7 87 5.0 3.0 4.0 1.4 106 chr2L 17990008 intergenic Prosbeta5R2 + chr2L 17990061 intergenic Prosbeta5R2 + chr2L 17990114 intergenic Prosbeta5R2 + chr2L_7_17990001 chr2L_17990001 RAL-370 537 chr2L 18051856 18051904 chr2L 18061023 18061071 roo 6 9152 2.5 6.0 4.2 1.2 9215 chr2L 18051856 intron rdo + chr2L 18056464 intron rdo + chr2L 18061071 intron rdo + chr2L_6_18055001 chr2L_18055001 RAL-370 538 chr2L 18079821 18079837 chr2L 18079927 18079942 6 106 1.5 5.5 3.5 1.3 121 chr2L 18079821 intron Arr1 + chr2L 18079882 intron Arr1 + chr2L 18079942 intron Arr1 + chr2L_6_18075001 chr2L_18075001 RAL-370 539 chr2L 18111224 18111245 chr2L 18111335 18111354 7 111 6.0 5.5 5.8 1.0 130 chr2L 18111224 intergenic not near genes chr2L 18111289 intergenic not near genes chr2L 18111354 intergenic not near genes chr2L_7_18110001 chr2L_18110001 RAL-370 540 chr2L 18235057 18235094 chr2L 18235200 18235243 10 138 5.5 7.0 6.2 1.4 186 chr2L 18235057 intron CG42750 - chr2L 18235150 intron CG42750 - chr2L 18235243 intron CG42750 - chr2L_10_18235001 chr2L_18235001 RAL-370 541 chr2L 18255464 18255503 chr2L 18255569 18255606 12 102 3.0 3.0 3.0 3.0 142 chr2L 18255464 intron CG42750 - chr2L 18255535 intron CG42750 - chr2L 18255606 intron CG42750 - chr2L_12_18255001 chr2L_18255001 RAL-370 542 chr2L 18274024 18274070 chr2L 18274127 18274173 11 105 5.0 4.5 4.8 1.9 149 chr2L 18274024 intron CG42750 - chr2L 18274098 intron CG42750 - chr2L 18274173 intron CG42750 - chr2L_11_18270001 chr2L_18270001 RAL-370 543 chr2L 18286393 18286448 chr2L 18286506 18286561 12 113 1.0 3.0 2.0 4.0 168 chr2L 18286393 intergenic not near genes chr2L 18286477 intergenic not near genes chr2L 18286561 intergenic not near genes chr2L_12_18285001 chr2L_18285001 RAL-370 544 chr2L 18291508 18291537 chr2L 18291626 18291655 9 117 1.5 0.0 0.8 5.0 147 chr2L 18291508 intergenic CG43362 -,CR44693 +,CR44696 - chr2L 18291582 intergenic CR44693 +,CG43362 -,CR44696 - chr2L 18291655 intergenic CR44693 +,CG43362 -,CR44696 - chr2L_9_18290001 chr2L_18290001 RAL-370 545 chr2L 18408011 18408039 chr2L 18412815 18412839 Doc 15 4802 7.5 0.0 3.8 3.1 4828 chr2L 18408011 intergenic not near genes chr2L 18410425 intergenic not near genes chr2L 18412839 intergenic not near genes chr2L_15_18410001 chr2L_18410001 RAL-370 546 chr2L 18440029 18440323 chr2L 18440312 18440449 12 216 0.0 0.0 0.0 12.0 420 chr2L 18440029 intergenic not near genes chr2L 18440239 intergenic not near genes chr2L 18440449 intergenic not near genes chr2L_12_18440001 chr2L_18440001 RAL-370 547 chr2L 18440330 18440338 chr2L 18440455 18440464 5 126 0.0 5.5 2.8 1.3 134 chr2L 18440330 intergenic not near genes chr2L 18440397 intergenic not near genes chr2L 18440464 intergenic not near genes chr2L_5_18440001 chr2L_18440001 RAL-370 548 chr2L 18440339 18440351 chr2L 18440454 18440476 4 121 0.0 5.5 2.8 1.1 137 chr2L 18440339 intergenic not near genes chr2L 18440408 intergenic not near genes chr2L 18440476 intergenic not near genes chr2L_4_18440001 chr2L_18440001 RAL-370 549 chr2L 18584755 18584780 chr2L 18584860 18584885 8 104 0.5 6.5 3.5 1.8 130 chr2L 18584755 intron Pde11 - chr2L 18584820 intron Pde11 - chr2L 18584885 intron Pde11 - chr2L_8_18580001 chr2L_18580001 RAL-370 550 chr2L 18629352 18629403 chr2L 18629455 18629506 13 102 6.0 7.5 6.8 1.7 154 chr2L 18629352 intron MESR3 + chr2L 18629429 intron MESR3 + chr2L 18629506 intron MESR3 + chr2L_13_18625001 chr2L_18625001 RAL-370 551 chr2L 18629129 18629161 chr2L 18629907 18629939 11 779 36.5 27.0 31.8 0.3 810 chr2L 18629129 intron MESR3 + chr2L 18629534 intron MESR3 + chr2L 18629939 intron MESR3 + chr2L_11_18625001 chr2L_18625001 RAL-370 552 chr2L 18730774 18730783 chr2L 18730871 18730880 4 97 0.5 7.5 4.0 0.8 106 chr2L 18730774 intron CG10348 - chr2L 18730827 intron CG10348 - chr2L 18730880 intron CG10348 - chr2L_4_18730001 chr2L_18730001 RAL-370 553 chr2L 18816722 18816767 chr2L 18816873 18816919 15 147 4.0 4.5 4.2 2.9 197 chr2L 18816722 intergenic not near genes chr2L 18816820 intergenic not near genes chr2L 18816919 intergenic not near genes chr2L_15_18815001 chr2L_18815001 RAL-370 554 chr2L 18876843 18876884 chr2L 18876941 18876982 14 97 3.0 7.0 5.0 2.3 139 chr2L 18876843 intron tup - chr2L 18876912 intron tup - chr2L 18876982 intron tup - chr2L_14_18875001 chr2L_18875001 RAL-370 555 chr2L 18898383 18898422 chr2L 18898484 18898524 11 98 2.5 0.5 1.5 4.4 141 chr2L 18898383 intergenic not near genes chr2L 18898454 intergenic not near genes chr2L 18898524 intergenic not near genes chr2L_11_18895001 chr2L_18895001 RAL-370 556 chr2L 18902628 18902639 chr2L 18902929 18902940 5 301 3.0 3.5 3.2 1.2 312 chr2L 18902628 intergenic not near genes chr2L 18902784 intergenic not near genes chr2L 18902940 intergenic not near genes chr2L_5_18900001 chr2L_18900001 RAL-370 557 chr2L 19024096 19024097 chr2L 21768291 21768294 8 2744195 5.5 17.0 11.2 0.7 2744198 chr2L 19024096 3` UTR CR43700 - chr2L 20396195 intron CG10947 - chr2L 21768294 intron CG31612 - chr2L_8_20395001 chr2L_20395001 RAL-370 558 chr2L 19077276 19077321 chr2L 19078734 19078778 12 1459 2.5 3.5 3.0 3.0 1502 chr2L 19077276 3` UTR CG10700 - chr2L 19078027 exon CG10700 - chr2L 19078778 exon CG10700 - chr2L_12_19075001 chr2L_19075001 RAL-370 559 chr2L 19147255 19147279 chr2L 19147389 19147401 7 133 5.5 0.0 2.8 1.8 146 chr2L 19147255 intron brat + chr2L 19147328 intron brat + chr2L 19147401 intron brat + chr2L_7_19145001 chr2L_19145001 RAL-370 560 chr2L 19147292 19147387 chr2L 19154408 19154442 297 5 7092 0.0 5.0 2.5 1.4 7150 chr2L 19147292 intron brat + chr2L 19150867 intron brat + chr2L 19154442 intron brat + chr2L_5_19150001 chr2L_19150001 RAL-370 561 chr2L 19189956 19189987 chr2L 19190121 19190161 11 173 4.0 2.0 3.0 2.8 205 chr2L 19189956 intergenic pigeon +,drl + chr2L 19190058 intergenic pigeon +,drl + chr2L 19190161 intergenic drl +,pigeon + chr2L_11_19190001 chr2L_19190001 RAL-370 562 chr2L 19199655 19199705 chr2L 19199747 19199785 15 88 3.5 2.5 3.0 3.8 130 chr2L 19199655 intron drl + chr2L 19199720 intron drl + chr2L 19199785 intron drl + chr2L_15_19195001 chr2L_19195001 RAL-370 563 chr2L 19209609 19209649 chr2L 19209702 19209754 9 99 3.0 3.5 3.2 2.1 145 chr2L 19209609 intergenic not near genes chr2L 19209682 intergenic not near genes chr2L 19209754 intergenic not near genes chr2L_9_19205001 chr2L_19205001 RAL-370 564 chr2L 19241039 19241089 chr2L 19241136 19241186 13 98 3.5 1.5 2.5 3.7 147 chr2L 19241039 intergenic not near genes chr2L 19241112 intergenic not near genes chr2L 19241186 intergenic not near genes chr2L_13_19240001 chr2L_19240001 RAL-370 565 chr2L 19305587 19305628 chr2L 19305713 19305754 13 124 6.0 1.0 3.5 2.9 167 chr2L 19305587 intergenic not near genes chr2L 19305670 intergenic not near genes chr2L 19305754 intergenic not near genes chr2L_13_19305001 chr2L_19305001 RAL-370 566 chr2L 19309600 19309610 chr2L 19309700 19309710 9 99 12.5 5.5 9.0 0.9 110 chr2L 19309600 intergenic not near genes chr2L 19309655 intergenic not near genes chr2L 19309710 intergenic not near genes chr2L_9_19305001 chr2L_19305001 RAL-370 567 chr2L 19309611 19309651 chr2L 19309697 19309751 13 92 3.5 5.0 4.2 2.5 140 chr2L 19309611 intergenic not near genes chr2L 19309681 intergenic not near genes chr2L 19309751 intergenic not near genes chr2L_13_19305001 chr2L_19305001 RAL-370 568 chr2L 19316183 19316229 chr2L 19316280 19316326 11 96 3.5 0.5 2.0 3.7 143 chr2L 19316183 intergenic not near genes chr2L 19316254 intergenic not near genes chr2L 19316326 intergenic not near genes chr2L_11_19315001 chr2L_19315001 RAL-370 569 chr2L 19344997 19345039 chr2L 19357226 19357268 blood 11 12228 3.0 2.0 2.5 3.1 12271 chr2L 19344997 intron dnt - chr2L 19351132 intron dnt - chr2L 19357268 intron dnt - chr2L_11_19350001 chr2L_19350001 RAL-370 570 chr2L 19357527 19357567 chr2L 19357637 19357677 19 108 7.0 6.5 6.8 2.4 150 chr2L 19357527 intron dnt - chr2L 19357602 intron dnt - chr2L 19357677 intron dnt - chr2L_19_19355001 chr2L_19355001 RAL-370 571 chr2L 19360578 19360610 chr2L 19360731 19360767 5 156 4.0 5.0 4.5 0.9 189 chr2L 19360578 intron dnt - chr2L 19360672 intron dnt - chr2L 19360767 intron dnt - chr2L_5_19360001 chr2L_19360001 RAL-370 572 chr2L 19380489 19380529 chr2L 19380589 19380628 14 98 5.0 6.5 5.8 2.1 139 chr2L 19380489 intergenic CG17350 + chr2L 19380558 intergenic CG17350 + chr2L 19380628 intergenic CG17350 + chr2L_14_19380001 chr2L_19380001 RAL-370 573 chr2L 19405599 19405637 chr2L 19405709 19405715 11 104 2.0 1.0 1.5 4.4 116 chr2L 19405599 intron Pax - chr2L 19405657 intron Pax - chr2L 19405715 intron Pax - chr2L_11_19405001 chr2L_19405001 RAL-370 574 chr2L 19407700 19407738 chr2L 19407913 19407955 16 215 6.5 3.5 5.0 2.7 255 chr2L 19407700 intron Pax - chr2L 19407828 intron Pax - chr2L 19407955 intron Pax - chr2L_16_19405001 chr2L_19405001 RAL-370 575 chr2L 19441045 19441088 chr2L 19441142 19441154 21 93 4.0 4.0 4.0 4.2 109 chr2L 19441045 intron CG10237 - chr2L 19441100 intron CG10237 - chr2L 19441154 intron CG10237 - chr2L_21_19440001 chr2L_19440001 RAL-370 576 chr2L 19559990 19560032 chr2L 19560263 19560304 8 272 5.5 5.0 5.2 1.3 314 chr2L 19559990 exon Tep5 + chr2L 19560147 exon Tep5 + chr2L 19560304 intron Tep5 + chr2L_8_19560001 chr2L_19560001 RAL-370 577 chr2L 19560816 19560856 chr2L 19560916 19560949 15 99 3.5 0.5 2.0 5.0 133 chr2L 19560816 exon Tep5 + chr2L 19560882 intron Tep5 + chr2L 19560949 exon Tep5 + chr2L_15_19560001 chr2L_19560001 RAL-370 578 chr2L 19601557 19601587 chr2L 19601654 19601684 8 96 3.0 6.0 4.5 1.5 127 chr2L 19601557 intron,intron Lar +,CR44978 - chr2L 19601620 intron,intron Lar +,CR44978 - chr2L 19601684 intron,intron Lar +,CR44978 - chr2L_8_19600001 chr2L_19600001 RAL-370 579 chr2L 19601591 19601598 chr2L 19601650 19601695 9 93 1.5 5.0 3.2 2.1 104 chr2L 19601591 intron,intron Lar +,CR44978 - chr2L 19601643 intron,intron Lar +,CR44978 - chr2L 19601695 intron,intron Lar +,CR44978 - chr2L_9_19600001 chr2L_19600001 RAL-370 580 chr2L 19620081 19620130 chr2L 19621083 19621117 jockey 12 994 4.5 4.0 4.2 2.3 1036 chr2L 19620081 intron Lar + chr2L 19620599 intron Lar + chr2L 19621117 intron Lar + chr2L_12_19620001 chr2L_19620001 RAL-370 581 chr2L 19652553 19652603 chr2L 19674007 19674018 opus 13 21448 6.5 6.5 6.5 1.7 21465 chr2L 19652553 intron Lar + chr2L 19663286 intron Lar + chr2L 19674018 intron Lar + chr2L_13_19660001 chr2L_19660001 RAL-370 582 chr2L 19689047 19689075 chr2L 19689171 19689199 13 124 5.5 5.0 5.2 2.1 152 chr2L 19689047 intron Lar + chr2L 19689123 intron Lar + chr2L 19689199 intron Lar + chr2L_13_19685001 chr2L_19685001 RAL-370 583 chr2L 19697116 19697168 chr2L 19697229 19697236 10 105 1.0 1.5 1.2 4.5 120 chr2L 19697116 intron Lar + chr2L 19697176 intron Lar + chr2L 19697236 intron Lar + chr2L_10_19695001 chr2L_19695001 RAL-370 584 chr2L 19703520 19703556 chr2L 19712676 19712711 roo 12 9154 8.5 7.0 7.8 1.4 9191 chr2L 19703520 intron Lar + chr2L 19708116 intron Lar + chr2L 19712711 intron Lar + chr2L_12_19705001 chr2L_19705001 RAL-370 585 chr2L 19737381 19737388 chr2L 19740828 19740839 1360 4 3451 2.0 5.5 3.8 0.8 3458 chr2L 19737381 intergenic Nf-YB + chr2L 19739110 intergenic not near genes chr2L 19740839 intergenic not near genes chr2L_4_19735001 chr2L_19735001 RAL-370 586 chr2L 19762789 19762839 chr2L 19763051 19763101 pogo 12 258 5.0 2.5 3.8 2.5 312 chr2L 19762789 exon fbp - chr2L 19762945 intron fbp - chr2L 19763101 intron fbp - chr2L_12_19760001 chr2L_19760001 RAL-370 587 chr2L 19773150 19773191 chr2L 19773257 19773298 15 107 3.5 2.5 3.0 3.8 148 chr2L 19773150 intergenic not near genes chr2L 19773224 intergenic not near genes chr2L 19773298 intergenic not near genes chr2L_15_19770001 chr2L_19770001 RAL-370 588 chr2L 19776641 19776658 chr2L 19776741 19776758 7 100 10.5 7.5 9.0 0.7 117 chr2L 19776641 3` UTR CdGAPr - chr2L 19776700 3` UTR CdGAPr - chr2L 19776758 3` UTR CdGAPr - chr2L_7_19775001 chr2L_19775001 RAL-370 589 chr2L 19837261 19837271 chr2L 19837361 19837371 4 99 9.0 2.5 5.8 0.6 110 chr2L 19837261 intron sick + chr2L 19837316 intron sick + chr2L 19837371 intron sick + chr2L_4_19835001 chr2L_19835001 RAL-370 590 chr2L 19837272 19837308 chr2L 19837358 19837401 18 97 4.0 2.5 3.2 4.3 129 chr2L 19837272 intron sick + chr2L 19837336 intron sick + chr2L 19837401 intron sick + chr2L_18_19835001 chr2L_19835001 RAL-370 591 chr2L 19846239 19846276 chr2L 19846340 19846377 12 101 0.0 6.5 3.2 2.9 138 chr2L 19846239 intron sick + chr2L 19846308 intron sick + chr2L 19846377 intron sick + chr2L_12_19845001 chr2L_19845001 RAL-370 592 chr2L 19865403 19865453 chr2L 19865508 19865559 11 106 7.0 3.5 5.2 1.8 156 chr2L 19865403 intron sick + chr2L 19865481 intron sick + chr2L 19865559 intron sick + chr2L_11_19865001 chr2L_19865001 RAL-370 593 chr2L 19878967 19879018 chr2L 19879196 19879227 18 227 3.5 0.0 1.8 6.4 260 chr2L 19878967 intron sick + chr2L 19879097 intron sick + chr2L 19879227 intron sick + chr2L_18_19875001 chr2L_19875001 RAL-370 594 chr2L 19902316 19902364 chr2L 19902461 19902463 20 141 3.5 3.0 3.2 4.8 147 chr2L 19902316 intron sick + chr2L 19902390 intron sick + chr2L 19902463 intron sick + chr2L_20_19900001 chr2L_19900001 RAL-370 595 chr2L 19964812 19964863 chr2L 19964916 19964965 12 102 5.5 2.0 3.8 2.5 153 chr2L 19964812 intron CG10680 + chr2L 19964888 exon CG10680 + chr2L 19964965 exon CG10680 + chr2L_12_19960001 chr2L_19960001 RAL-370 596 chr2L 20005851 20005897 chr2L 20010947 20010993 flea 6 5096 2.5 2.5 2.5 1.7 5142 chr2L 20005851 intron CG43861 - chr2L 20008422 intron CG43861 - chr2L 20010993 intron CG43861 - chr2L_6_20005001 chr2L_20005001 RAL-370 597 chr2L 20032429 20032454 chr2L 20033156 20033180 8 727 6.5 3.5 5.0 1.3 751 chr2L 20032429 intron sNPF + chr2L 20032804 intron sNPF + chr2L 20033180 intron sNPF + chr2L_8_20030001 chr2L_20030001 RAL-370 598 chr2L 20057045 20057071 chr2L 20057142 20057167 7 95 5.0 2.0 3.5 1.6 122 chr2L 20057045 intergenic not near genes chr2L 20057106 intergenic not near genes chr2L 20057167 intergenic not near genes chr2L_7_20055001 chr2L_20055001 RAL-370 599 chr2L 20067565 20067616 chr2L 20067690 20067741 13 124 4.5 4.0 4.2 2.5 176 chr2L 20067565 intron bwa + chr2L 20067653 intron bwa + chr2L 20067741 intron bwa + chr2L_13_20065001 chr2L_20065001 RAL-370 600 chr2L 20085450 20085499 chr2L 20085562 20085610 15 109 1.5 6.0 3.8 3.1 160 chr2L 20085450 intron neb + chr2L 20085530 intron neb + chr2L 20085610 intron neb + chr2L_15_20085001 chr2L_20085001 RAL-370 601 chr2L 20124321 20124357 chr2L 20124419 20124455 10 98 5.5 5.5 5.5 1.5 134 chr2L 20124321 intergenic not near genes chr2L 20124388 intergenic not near genes chr2L 20124455 intergenic not near genes chr2L_10_20120001 chr2L_20120001 RAL-370 602 chr2L 20269590 20269626 chr2L 20269834 20269869 13 239 4.5 3.5 4.0 2.6 279 chr2L 20269590 intergenic not near genes chr2L 20269730 intergenic not near genes chr2L 20269869 intergenic not near genes chr2L_13_20265001 chr2L_20265001 RAL-370 603 chr2L 20271241 20271271 chr2L 20271344 20271374 8 102 8.5 7.0 7.8 0.9 133 chr2L 20271241 intergenic not near genes chr2L 20271308 intergenic not near genes chr2L 20271374 intergenic not near genes chr2L_8_20270001 chr2L_20270001 RAL-370 604 chr2L 20272109 20272139 chr2L 20282840 20282870 copia 13 10731 6.0 6.0 6.0 1.9 10761 chr2L 20272109 intergenic not near genes chr2L 20277490 intergenic not near genes chr2L 20282870 intergenic not near genes chr2L_13_20275001 chr2L_20275001 RAL-370 605 chr2L 20296502 20296540 chr2L 20296602 20296642 7 101 1.0 5.5 3.2 1.7 140 chr2L 20296502 intergenic CR43414 - chr2L 20296572 intergenic CR43414 - chr2L 20296642 3` UTR CR43414 - chr2L_7_20295001 chr2L_20295001 RAL-370 606 chr2L 20303148 20303170 chr2L 20310636 20310658 blood 5 7488 2.5 3.5 3.0 1.2 7510 chr2L 20303148 intergenic not near genes chr2L 20306903 intergenic not near genes chr2L 20310658 intergenic not near genes chr2L_5_20305001 chr2L_20305001 RAL-370 607 chr2L 20372208 20372244 chr2L 20372469 20372505 pogo 13 261 0.0 4.5 2.2 4.1 297 chr2L 20372208 intergenic Ugt37a1 - chr2L 20372356 intergenic Ugt37a1 - chr2L 20372505 exon Ugt37a1 - chr2L_13_20370001 chr2L_20370001 RAL-370 608 chr2L 20396803 20396812 chr2L 20396897 20396908 5 95 6.0 4.5 5.2 0.8 105 chr2L 20396803 intron CG10947 - chr2L 20396856 intron CG10947 - chr2L 20396908 intron CG10947 - chr2L_5_20395001 chr2L_20395001 RAL-370 609 chr2L 20498669 20498705 chr2L 20498787 20498824 11 118 5.5 7.5 6.5 1.5 155 chr2L 20498669 intergenic not near genes chr2L 20498746 intergenic not near genes chr2L 20498824 intergenic not near genes chr2L_11_20495001 chr2L_20495001 RAL-370 610 chr2L 20533856 20533861 chr2L 20533937 20533958 4 93 1.5 3.0 2.2 1.2 102 chr2L 20533856 intergenic not near genes chr2L 20533907 intergenic not near genes chr2L 20533958 intergenic not near genes chr2L_4_20530001 chr2L_20530001 RAL-370 611 chr2L 20553178 20553198 chr2L 20553271 20553294 7 95 7.0 5.5 6.2 1.0 116 chr2L 20553178 intergenic not near genes chr2L 20553236 intergenic not near genes chr2L 20553294 intergenic not near genes chr2L_7_20550001 chr2L_20550001 RAL-370 612 chr2L 20568644 20568683 chr2L 20569053 20569093 X-element 9 408 6.0 4.5 5.2 1.5 449 chr2L 20568644 intron CR45347 + chr2L 20568868 intron CR45347 + chr2L 20569093 intron CR45347 + chr2L_9_20565001 chr2L_20565001 RAL-370 613 chr2L 20572946 20572995 chr2L 20573049 20573100 18 100 2.0 1.0 1.5 7.2 154 chr2L 20572946 intron CR45347 + chr2L 20573023 intron CR45347 + chr2L 20573100 intron CR45347 + chr2L_18_20570001 chr2L_20570001 RAL-370 614 chr2L 20576201 20576246 chr2L 20583688 20583734 blood 13 7487 9.0 4.0 6.5 1.7 7533 chr2L 20576201 intergenic CR45347 + chr2L 20579968 intergenic not near genes chr2L 20583734 3` UTR CR44909 - chr2L_13_20575001 chr2L_20575001 RAL-370 615 chr2L 20589490 20589523 chr2L 20589570 20589614 17 93 6.0 6.0 6.0 2.4 124 chr2L 20589490 intron CR44909 - chr2L 20589552 intron CR44909 - chr2L 20589614 intron CR44909 - chr2L_17_20585001 chr2L_20585001 RAL-370 616 chr2L 20668673 20668718 chr2L 20668769 20668814 16 95 3.0 3.5 3.2 3.8 141 chr2L 20668673 intron CG31678 - chr2L 20668744 intron CG31678 - chr2L 20668814 intron CG31678 - chr2L_16_20665001 chr2L_20665001 RAL-370 617 chr2L 20674812 20674849 chr2L 20674916 20674947 5 103 7.0 0.0 3.5 1.1 135 chr2L 20674812 intron CG31678 - chr2L 20674880 intron CG31678 - chr2L 20674947 intron CG31678 - chr2L_5_20670001 chr2L_20670001 RAL-370 618 chr2L 20695780 20695820 chr2L 20695888 20695928 16 105 4.5 4.0 4.2 3.1 148 chr2L 20695780 intron Hr38 - chr2L 20695854 intron Hr38 - chr2L 20695928 intron Hr38 - chr2L_16_20695001 chr2L_20695001 RAL-370 619 chr2L 20818493 20818536 chr2L 20818594 20818638 7 95 4.0 4.5 4.2 1.3 145 chr2L 20818493 exon CheB38a - chr2L 20818566 intergenic CheB38a - chr2L 20818638 intergenic CheB38a - chr2L_7_20815001 chr2L_20815001 RAL-370 620 chr2L 20835790 20835830 chr2L 20836527 20836567 Quasimodo 12 734 2.5 1.5 2.0 4.0 777 chr2L 20835790 5` UTR Oseg5 - chr2L 20836178 intergenic Oseg5 -,Spn38F - chr2L 20836567 intergenic Spn38F - chr2L_12_20835001 chr2L_20835001 RAL-370 621 chr2L 20839692 20839735 chr2L 20839788 20839829 11 96 2.0 4.5 3.2 2.6 137 chr2L 20839692 intergenic not near genes chr2L 20839760 intergenic not near genes chr2L 20839829 intergenic not near genes chr2L_11_20835001 chr2L_20835001 RAL-370 622 chr2L 20891515 20891544 chr2L 20896636 20896664 jockey 9 5120 4.0 5.0 4.5 1.6 5149 chr2L 20891515 intron,intron CG43739 -,sky - chr2L 20894090 intron,intron CG43739 -,sky - chr2L 20896664 intron,intron CG43739 -,sky - chr2L_9_20890001 chr2L_20890001 RAL-370 623 chr2L 20909353 20909389 chr2L 20909457 20909493 10 103 5.0 2.5 3.8 2.1 140 chr2L 20909353 intron,intron CG43739 -,sky - chr2L 20909423 intron,intron CG43739 -,sky - chr2L 20909493 intron,intron CG43739 -,sky - chr2L_10_20905001 chr2L_20905001 RAL-370 624 chr2L 20927281 20927288 chr2L 20927527 20927533 5 246 17.0 27.0 22.0 0.2 252 chr2L 20927281 exon CG9272 - chr2L 20927407 exon CG9272 - chr2L 20927533 exon CG9272 - chr2L_5_20925001 chr2L_20925001 RAL-370 625 chr2L 20927272 20927296 chr2L 20927535 20927557 11 251 20.0 24.0 22.0 0.5 285 chr2L 20927272 exon CG9272 - chr2L 20927414 exon CG9272 - chr2L 20927557 exon CG9272 - chr2L_11_20925001 chr2L_20925001 RAL-370 626 chr2L 20946925 20946962 chr2L 20947032 20947065 16 105 4.0 3.5 3.8 3.3 140 chr2L 20946925 intergenic CR44606 - chr2L 20946995 intergenic CR44606 - chr2L 20947065 intergenic CR44606 - chr2L_16_20945001 chr2L_20945001 RAL-370 627 chr2L 20967065 20967105 chr2L 20967170 20967211 12 106 3.5 3.0 3.2 2.9 146 chr2L 20967065 3` UTR CG42238 - chr2L 20967138 3` UTR CG42238 - chr2L 20967211 3` UTR CG42238 - chr2L_12_20965001 chr2L_20965001 RAL-370 628 chr2L 20976634 20976664 chr2L 20981469 20981480 X-element 10 4833 6.5 5.0 5.8 1.5 4846 chr2L 20976634 intron CG42238 - chr2L 20979057 intron CG42238 - chr2L 20981480 intron CG42238 - chr2L_10_20975001 chr2L_20975001 RAL-370 629 chr2L 21019312 21019318 chr2L 21019453 21019457 4 140 10.0 1.5 5.8 0.6 145 chr2L 21019312 intron CG42238 - chr2L 21019384 intron CG42238 - chr2L 21019457 intron CG42238 - chr2L_4_21015001 chr2L_21015001 RAL-370 630 chr2L 21019320 21019361 chr2L 21019451 21019502 7 132 5.5 1.5 3.5 1.6 182 chr2L 21019320 intron CG42238 - chr2L 21019411 intron CG42238 - chr2L 21019502 intron CG42238 - chr2L_7_21015001 chr2L_21015001 RAL-370 631 chr2L 21020262 21020311 chr2L 21023958 21023990 NOF 14 3690 5.0 4.0 4.5 2.5 3728 chr2L 21020262 intron CG42238 - chr2L 21022126 intron CG42238 - chr2L 21023990 intron CG42238 - chr2L_14_21020001 chr2L_21020001 RAL-370 632 chr2L 21035384 21035425 chr2L 21035513 21035554 9 126 4.5 1.0 2.8 2.4 170 chr2L 21035384 intron CG42238 - chr2L 21035469 intron CG42238 - chr2L 21035554 intron CG42238 - chr2L_9_21035001 chr2L_21035001 RAL-370 633 chr2L 21041125 21041164 chr2L 21049397 21049419 Tirant 5 8273 4.5 7.0 5.8 0.7 8294 chr2L 21041125 intron CG42238 - chr2L 21045272 intron CG42238 - chr2L 21049419 intron CG42238 - chr2L_5_21045001 chr2L_21045001 RAL-370 634 chr2L 21110639 21110680 chr2L 21110744 21110785 12 105 6.5 2.5 4.5 2.2 146 chr2L 21110639 intron Nhe2 + chr2L 21110712 intron Nhe2 + chr2L 21110785 intron Nhe2 + chr2L_12_21110001 chr2L_21110001 RAL-370 635 chr2L 21118812 21118866 chr2L 21118948 21118992 19 133 3.0 3.0 3.0 4.8 180 chr2L 21118812 intron Nhe2 + chr2L 21118902 intron Nhe2 + chr2L 21118992 intron Nhe2 + chr2L_19_21115001 chr2L_21115001 RAL-370 636 chr2L 21286584 21286620 chr2L 21286682 21286718 14 96 8.0 3.0 5.5 2.2 134 chr2L 21286584 exon Mio - chr2L 21286651 intron Mio - chr2L 21286718 intron Mio - chr2L_14_21285001 chr2L_21285001 RAL-370 637 chr2L 21307453 21307464 chr2L 21307555 21307566 8 102 5.0 4.0 4.5 1.5 113 chr2L 21307453 intron Mio - chr2L 21307510 intron Mio - chr2L 21307566 intron Mio - chr2L_8_21305001 chr2L_21305001 RAL-370 638 chr2L 21307482 21307491 chr2L 21307551 21307593 4 93 3.5 3.5 3.5 0.9 111 chr2L 21307482 intron Mio - chr2L 21307538 intron Mio - chr2L 21307593 intron Mio - chr2L_4_21305001 chr2L_21305001 RAL-370 639 chr2L 21347531 21347566 chr2L 21355023 21355057 blood 5 7491 6.5 0.5 3.5 1.1 7526 chr2L 21347531 intron Tsp39D + chr2L 21351294 intron Tsp39D + chr2L 21355057 intron Tsp39D + chr2L_5_21350001 chr2L_21350001 RAL-370 640 chr2L 21396588 21396618 chr2L 21396842 21396873 11 255 7.0 8.5 7.8 1.2 285 chr2L 21396588 intergenic not near genes chr2L 21396730 intergenic not near genes chr2L 21396873 intergenic not near genes chr2L_11_21395001 chr2L_21395001 RAL-370 641 chr2L 21597031 21597063 chr2L 21604777 21604827 roo 12 7760 6.5 7.0 6.8 1.5 7796 chr2L 21597031 intergenic not near genes chr2L 21600929 intergenic not near genes chr2L 21604827 intergenic not near genes chr2L_12_21600001 chr2L_21600001 RAL-370 642 chr2L 21605020 21605062 chr2L 21606702 21606744 9 1682 4.0 2.0 3.0 2.2 1724 chr2L 21605020 intergenic not near genes chr2L 21605882 intergenic not near genes chr2L 21606744 intergenic not near genes chr2L_9_21605001 chr2L_21605001 RAL-370 643 chr2L 21634050 21634072 chr2L 21634234 21634256 8 184 3.5 5.5 4.5 1.5 206 chr2L 21634050 intron Ac3 + chr2L 21634153 intron Ac3 + chr2L 21634256 intron Ac3 + chr2L_8_21630001 chr2L_21630001 RAL-370 644 chr2L 21691805 21691838 chr2L 21698295 21698328 Burdock 8 6490 5.5 0.0 2.8 2.1 6523 chr2L 21691805 intron CG31619 + chr2L 21695066 intron CG31619 + chr2L 21698328 intron CG31619 + chr2L_8_21695001 chr2L_21695001 RAL-370 645 chr2L 21743743 21743785 chr2L 21743840 21743882 8 97 4.0 2.0 3.0 2.0 139 chr2L 21743743 intron step - chr2L 21743812 intron step - chr2L 21743882 exon step - chr2L_8_21740001 chr2L_21740001 RAL-370 646 chr2L 21744672 21744719 chr2L 21744779 21744825 14 104 4.0 4.5 4.2 2.7 153 chr2L 21744672 intron step - chr2L 21744748 intron step - chr2L 21744825 intron step - chr2L_14_21740001 chr2L_21740001 RAL-370 647 chr2L 21745228 21745281 chr2L 21745338 21745391 5 109 1.5 2.5 2.0 1.7 163 chr2L 21745228 intron step - chr2L 21745310 intron step - chr2L 21745391 intron step - chr2L_5_21745001 chr2L_21745001 RAL-370 648 chr2L 21750082 21750122 chr2L 21750422 21750465 7 340 1.5 2.0 1.8 2.5 383 chr2L 21750082 intron step - chr2L 21750274 intron step - chr2L 21750465 intron step - chr2L_7_21750001 chr2L_21750001 RAL-370 649 chr2L 21766632 21766677 chr2L 21766739 21766751 12 104 4.5 5.0 4.8 2.1 119 chr2L 21766632 intron CG31612 - chr2L 21766692 intron CG31612 - chr2L 21766751 intron CG31612 - chr2L_12_21765001 chr2L_21765001 RAL-370 650 chr2L 21819308 21819357 chr2L 21819415 21819436 11 105 4.5 4.0 4.2 2.1 128 chr2L 21819308 intergenic CR44786 + chr2L 21819372 intergenic CR44786 + chr2L 21819436 intergenic CR44786 + chr2L_11_21815001 chr2L_21815001 RAL-370 651 chr2L 21981664 21981690 chr2L 21990849 21990872 roo 4 9184 11.0 6.5 8.8 0.4 9208 chr2L 21981664 exon CG2528 - chr2L 21986268 intron CG2528 - chr2L 21990872 exon CG2528 - chr2L_4_21985001 chr2L_21985001 RAL-370 652 chr2L 21981692 21981710 chr2L 21990847 21990893 roo 7 9178 7.0 5.5 6.2 1.0 9201 chr2L 21981692 exon CG2528 - chr2L 21986292 intron CG2528 - chr2L 21990893 exon CG2528 - chr2L_7_21985001 chr2L_21985001 RAL-370 653 chr2L 22047234 22047256 chr2L 22047379 22047401 11 145 4.0 6.0 5.0 1.8 167 chr2L 22047234 intergenic not near genes chr2L 22047318 intergenic not near genes chr2L 22047401 intergenic not near genes chr2L_11_22045001 chr2L_22045001 RAL-370 654 chr2L 22136363 22136388 chr2L 22136458 22136491 7 102 4.0 6.0 5.0 1.2 128 chr2L 22136363 intron CG42748 + chr2L 22136427 intron CG42748 + chr2L 22136491 intron CG42748 + chr2L_7_22135001 chr2L_22135001 RAL-370 655 chr2L 22165493 22165541 chr2L 22165598 22165646 8 104 2.0 1.5 1.8 2.9 153 chr2L 22165493 3` UTR CG42748 + chr2L 22165570 3` UTR CG42748 + chr2L 22165646 3` UTR CG42748 + chr2L_8_22165001 chr2L_22165001 RAL-370 656 chr2L 22191828 22192052 chr2L 22191936 22192116 42 106 6.0 4.0 5.0 7.0 288 chr2L 22191828 intron Ir40a - chr2L 22191972 intron Ir40a - chr2L 22192116 intron Ir40a - chr2L_42_22190001 chr2L_22190001 RAL-370 657 chr2L 22239421 22239425 chr2L 22239516 22239526 4 98 12.0 9.5 10.8 0.3 105 chr2L 22239421 intron CR43765 - chr2L 22239474 3` UTR CR43765 - chr2L 22239526 3` UTR CR43765 - chr2L_4_22235001 chr2L_22235001 RAL-370 658 chr2L 22239427 22239459 chr2L 22239507 22239549 15 92 5.5 5.5 5.5 2.3 122 chr2L 22239427 3` UTR CR43765 - chr2L 22239488 3` UTR CR43765 - chr2L 22239549 3` UTR CR43765 - chr2L_15_22235001 chr2L_22235001 RAL-370 659 chr2L 22258590 22258634 chr2L 22260735 22260754 G6 8 2141 0.5 4.0 2.2 2.5 2164 chr2L 22258590 intergenic Tif-IA + chr2L 22259672 intergenic not near genes chr2L 22260754 intergenic not near genes chr2L_8_22255001 chr2L_22255001 RAL-370 660 chr2L 22350244 22350295 chr2L 22350366 22350379 12 113 3.0 3.5 3.2 2.9 135 chr2L 22350244 intron CG17018 + chr2L 22350312 intron CG17018 + chr2L 22350379 intron CG17018 + chr2L_12_22350001 chr2L_22350001 RAL-370 661 chr2L 22510396 22510435 chr2L 22510621 22510625 6 221 3.5 3.5 3.5 1.3 229 chr2L 22510396 intergenic not near genes chr2L 22510510 intergenic not near genes chr2L 22510625 intergenic not near genes chr2L_6_22510001 chr2L_22510001 RAL-370 662 chr2L 22545958 22546006 chr2L 22546074 22546111 21 113 3.0 2.5 2.8 5.5 153 chr2L 22545958 intron CG17490 + chr2L 22546034 intron CG17490 + chr2L 22546111 intron CG17490 + chr2L_21_22545001 chr2L_22545001 RAL-370 663 chr2L 22548923 22548938 chr2L 22550144 22550173 1360 5 1238 0.5 7.0 3.8 1.0 1250 chr2L 22548923 intergenic CG17490 + chr2L 22549548 intergenic not near genes chr2L 22550173 intergenic CG17493 + chr2L_5_22545001 chr2L_22545001 RAL-370 664 chr2L 22674053 22674077 chr2L 22674150 22674173 13 97 4.5 3.5 4.0 2.6 120 chr2L 22674053 intron CG40006 - chr2L 22674113 intron CG40006 - chr2L 22674173 intron CG40006 - chr2L_13_22670001 chr2L_22670001 RAL-370 665 chr2L 22676110 22676156 chr2L 22676368 22676414 14 258 3.0 4.0 3.5 3.1 304 chr2L 22676110 intron CG40006 - chr2L 22676262 intron CG40006 - chr2L 22676414 intron CG40006 - chr2L_14_22675001 chr2L_22675001 RAL-370 666 chr2L 22679803 22679820 chr2L 22684573 22684610 F-element 7 4788 8.0 4.5 6.2 1.0 4807 chr2L 22679803 intron CG40006 - chr2L 22682206 intron CG40006 - chr2L 22684610 intron CG40006 - chr2L_7_22680001 chr2L_22680001 RAL-370 667 chr2L 22693910 22693948 chr2L 22694006 22694055 16 100 2.0 4.0 3.0 4.0 145 chr2L 22693910 intron CG40006 - chr2L 22693982 intron CG40006 - chr2L 22694055 intron CG40006 - chr2L_16_22690001 chr2L_22690001 RAL-370 668 chr2L 22776402 22776441 chr2L 22778211 22778250 S-element 4 1809 3.5 2.5 3.0 1.0 1848 chr2L 22776402 intergenic not near genes chr2L 22777326 intergenic not near genes chr2L 22778250 intergenic not near genes chr2L_4_22775001 chr2L_22775001 RAL-370 669 chr2L 22983927 22983968 chr2L 22984018 22984064 10 90 2.0 2.0 2.0 3.3 137 chr2L 22983927 intron cta + chr2L 22983996 intron cta + chr2L 22984064 intron cta + chr2L_10_22980001 chr2L_22980001 RAL-370 670 chr2L 23168876 23168887 chr2L 23168968 23168980 6 94 7.0 10.0 8.5 0.6 104 chr2L 23168876 intron,5` UTR CG12567 -,mir-2490 + chr2L 23168928 intron CG12567 - chr2L 23168980 intron CG12567 - chr2L_6_23165001 chr2L_23165001 RAL-370 671 chr2R 529320 529341 chr2R 537959 537984 Max-element 10 8642 3.5 5.5 4.5 1.8 8664 chr2R 529320 intron CG40378 + chr2R 533652 intron CG40378 + chr2R 537984 intron CG40378 + chr2R_10_530001 chr2R_530001 RAL-370 672 chr2R 552738 552783 chr2R 553975 553988 1360 6 1218 2.5 3.5 3.0 1.5 1250 chr2R 552738 intron CG40378 + chr2R 553363 intron CG40378 + chr2R 553988 intron CG40378 + chr2R_6_550001 chr2R_550001 RAL-370 673 chr2R 952424 952454 chr2R 952567 952596 6 143 4.0 2.0 3.0 1.5 172 chr2R 952424 intergenic not near genes chr2R 952510 intergenic not near genes chr2R 952596 intergenic not near genes chr2R_6_950001 chr2R_950001 RAL-370 674 chr2R 1082381 1082385 chr2R 1087133 1087133 Doc 4 4756 1.5 4.0 2.8 1.1 4752 chr2R 1082381 intron rl + chr2R 1084757 intron rl + chr2R 1087133 intron rl + chr2R_4_1080001 chr2R_1080001 RAL-370 675 chr2R 1340584 1340591 chr2R 1340868 1340874 4 283 20.5 33.5 27.0 0.1 290 chr2R 1340584 intergenic not near genes chr2R 1340729 intergenic not near genes chr2R 1340874 intergenic not near genes chr2R_4_1340001 chr2R_1340001 RAL-370 676 chr2R 1365844 1365894 chr2R 1365975 1366026 12 128 3.5 3.5 3.5 2.7 182 chr2R 1365844 intron l(2)41Ab + chr2R 1365935 intron l(2)41Ab + chr2R 1366026 intron l(2)41Ab + chr2R_12_1365001 chr2R_1365001 RAL-370 677 chr2R 1516586 1516598 chr2R 1521334 1521346 1731 8 4748 16.5 5.0 10.8 0.7 4760 chr2R 1516586 exon Maf1 - chr2R 1518966 intron Maf1 - chr2R 1521346 5` UTR Maf1 - chr2R_8_1515001 chr2R_1515001 RAL-370 678 chr2R 2015116 2015162 chr2R 2015213 2015258 5 95 3.0 3.5 3.2 1.2 142 chr2R 2015116 intron CG17684 - chr2R 2015187 intron CG17684 - chr2R 2015258 intron CG17684 - chr2R_5_2015001 chr2R_2015001 RAL-370 679 chr2R 2498974 2499014 chr2R 2508140 2508181 roo 13 9167 4.0 3.0 3.5 2.9 9207 chr2R 2498974 intron MFS17 - chr2R 2503578 intron MFS17 - chr2R 2508181 intron MFS17 - chr2R_13_2500001 chr2R_2500001 RAL-370 680 chr2R 2508292 2508339 chr2R 2508445 2508494 8 156 3.0 4.0 3.5 1.8 202 chr2R 2508292 intron MFS17 - chr2R 2508393 intron MFS17 - chr2R 2508494 intron MFS17 - chr2R_8_2505001 chr2R_2505001 RAL-370 681 chr2R 3107741 3107750 chr2R 3108444 3108454 4 703 2.0 5.0 3.5 0.9 713 chr2R 3107741 intron CG42596 + chr2R 3108098 intron CG42596 + chr2R 3108454 intron CG42596 + chr2R_4_3105001 chr2R_3105001 RAL-370 682 chr2R 3144098 3144109 chr2R 3393396 3393407 Doc 6 249297 25.0 7.0 16.0 0.4 249309 chr2R 3144098 intron CG42596 + chr2R 3268752 intergenic not near genes chr2R 3393407 intergenic not near genes chr2R_6_3265001 chr2R_3265001 RAL-370 683 chr2R 3291843 3292099 chr2R 3915027 3915276 5 623184 12.5 25.0 18.8 0.3 623433 chr2R 3291843 intergenic not near genes chr2R 3603560 intergenic not near genes chr2R 3915276 intron uex - chr2R_5_3600001 chr2R_3600001 RAL-370 684 chr2R 3293741 3293759 chr2R 3293835 3293835 9 93 4.0 5.5 4.8 1.6 94 chr2R 3293741 intergenic not near genes chr2R 3293788 intergenic not near genes chr2R 3293835 intergenic not near genes chr2R_9_3290001 chr2R_3290001 RAL-370 685 chr2R 3532600 3532641 chr2R 3536063 3536103 Doc 6 3462 0.5 1.5 1.0 3.0 3503 chr2R 3532600 intergenic not near genes chr2R 3534352 intergenic not near genes chr2R 3536103 intergenic not near genes chr2R_6_3530001 chr2R_3530001 RAL-370 686 chr2R 4312938 4312987 chr2R 4313042 4313091 16 103 5.0 6.5 5.8 2.4 153 chr2R 4312938 intergenic not near genes chr2R 4313014 intergenic not near genes chr2R 4313091 intergenic not near genes chr2R_16_4310001 chr2R_4310001 RAL-370 687 chr2R 4602820 4602869 chr2R 4603195 4603241 11 366 3.0 5.0 4.0 2.2 421 chr2R 4602820 intron p120ctn + chr2R 4603030 intron p120ctn + chr2R 4603241 intron p120ctn + chr2R_11_4600001 chr2R_4600001 RAL-370 688 chr2R 4621302 4621341 chr2R 4621859 4621897 10 559 4.5 2.5 3.5 2.2 595 chr2R 4621302 3` UTR CR44101 - chr2R 4621600 3` UTR CR44101 - chr2R 4621897 3` UTR CR44101 - chr2R_10_4620001 chr2R_4620001 RAL-370 689 chr2R 4622947 4622987 chr2R 4624126 4624166 1360 8 1173 6.0 9.0 7.5 0.9 1219 chr2R 4622947 intergenic CR44101 - chr2R 4623556 intergenic not near genes chr2R 4624166 intergenic not near genes chr2R_8_4620001 chr2R_4620001 RAL-370 690 chr2R 4634631 4634647 chr2R 4634731 4634745 5 100 6.5 6.0 6.2 0.7 114 chr2R 4634631 intergenic not near genes chr2R 4634688 intergenic not near genes chr2R 4634745 intergenic not near genes chr2R_5_4630001 chr2R_4630001 RAL-370 691 chr2R 4782777 4782792 chr2R 4782898 4782913 5 121 2.0 11.5 6.8 0.6 136 chr2R 4782777 intergenic not near genes chr2R 4782845 intergenic not near genes chr2R 4782913 intergenic not near genes chr2R_5_4780001 chr2R_4780001 RAL-370 692 chr2R 4783238 4783268 chr2R 4783390 4783422 15 151 2.0 6.0 4.0 3.0 184 chr2R 4783238 intergenic not near genes chr2R 4783330 intergenic not near genes chr2R 4783422 intergenic not near genes chr2R_15_4780001 chr2R_4780001 RAL-370 693 chr2R 4821216 4821234 chr2R 4821322 4821335 6 103 2.5 4.0 3.2 1.4 119 chr2R 4821216 intron CG17528 - chr2R 4821276 intron CG17528 - chr2R 4821335 intron CG17528 - chr2R_6_4820001 chr2R_4820001 RAL-370 694 chr2R 4838852 4838904 chr2R 4840395 4840447 transib2 14 1542 6.5 3.0 4.8 2.4 1595 chr2R 4838852 intergenic not near genes chr2R 4839650 intergenic not near genes chr2R 4840447 intergenic not near genes chr2R_14_4835001 chr2R_4835001 RAL-370 695 chr2R 4870723 4870742 chr2R 4871254 4871273 R1A1-element 8 530 5.5 6.5 6.0 1.1 550 chr2R 4870723 intergenic not near genes chr2R 4870998 intergenic not near genes chr2R 4871273 intergenic not near genes chr2R_8_4870001 chr2R_4870001 RAL-370 696 chr2R 4887599 4887646 chr2R 4887815 4887861 9 216 1.0 3.5 2.2 2.8 262 chr2R 4887599 intergenic not near genes chr2R 4887730 intergenic not near genes chr2R 4887861 intergenic not near genes chr2R_9_4885001 chr2R_4885001 RAL-370 697 chr2R 4933363 4933392 chr2R 4933932 4933976 6 574 0.5 3.0 1.8 2.1 613 chr2R 4933363 intron Ir41a + chr2R 4933670 intron Ir41a + chr2R 4933976 intron Ir41a + chr2R_6_4930001 chr2R_4930001 RAL-370 698 chr2R 4940939 4940988 chr2R 4943409 4943430 9 2467 0.0 5.0 2.5 2.6 2491 chr2R 4940939 intron Ir41a + chr2R 4942184 intron Ir41a + chr2R 4943430 intron Ir41a + chr2R_9_4940001 chr2R_4940001 RAL-370 699 chr2R 5019258 5019309 chr2R 5019362 5019415 10 105 1.5 2.5 2.0 3.3 157 chr2R 5019258 intron Ir41a + chr2R 5019336 intron Ir41a + chr2R 5019415 intron Ir41a + chr2R_10_5015001 chr2R_5015001 RAL-370 700 chr2R 5038510 5038526 chr2R 5039327 5039343 5 815 26.0 20.5 23.2 0.2 833 chr2R 5038510 intergenic not near genes chr2R 5038926 intergenic not near genes chr2R 5039343 intergenic not near genes chr2R_5_5035001 chr2R_5035001 RAL-370 701 chr2R 5040747 5040752 chr2R 5041255 5041261 4 509 5.0 4.0 4.5 0.7 514 chr2R 5040747 intergenic not near genes chr2R 5041004 intergenic not near genes chr2R 5041261 intergenic not near genes chr2R_4_5040001 chr2R_5040001 RAL-370 702 chr2R 5075209 5075226 chr2R 5075354 5075355 9 143 12.0 0.0 6.0 1.3 146 chr2R 5075209 intergenic not near genes chr2R 5075282 intergenic not near genes chr2R 5075355 intergenic not near genes chr2R_9_5075001 chr2R_5075001 RAL-370 703 chr2R 5075349 5075373 chr2R 5075782 5075809 4 435 0.0 6.5 3.2 1.0 460 chr2R 5075349 intergenic not near genes chr2R 5075579 intergenic not near genes chr2R 5075809 intergenic not near genes chr2R_4_5075001 chr2R_5075001 RAL-370 704 chr2R 5080770 5080818 chr2R 5080876 5080928 10 98 4.5 2.5 3.5 2.2 158 chr2R 5080770 intergenic not near genes chr2R 5080849 intergenic not near genes chr2R 5080928 intergenic not near genes chr2R_10_5080001 chr2R_5080001 RAL-370 705 chr2R 5301560 5301614 chr2R 5301666 5301720 9 103 4.0 4.5 4.2 1.7 160 chr2R 5301560 intergenic not near genes chr2R 5301640 intergenic not near genes chr2R 5301720 intergenic not near genes chr2R_9_5300001 chr2R_5300001 RAL-370 706 chr2R 5472360 5472390 chr2R 5472479 5472512 4 122 4.0 5.5 4.8 0.7 152 chr2R 5472360 intron CG30440 - chr2R 5472436 intron CG30440 - chr2R 5472512 intron CG30440 - chr2R_4_5470001 chr2R_5470001 RAL-370 707 chr2R 5505338 5505386 chr2R 5505436 5505486 16 94 2.5 5.5 4.0 3.2 148 chr2R 5505338 intron,intron CG30438 +,TpnC4 - chr2R 5505412 intron,intron CG30438 +,TpnC4 - chr2R 5505486 intron,intron CG30438 +,TpnC4 - chr2R_16_5505001 chr2R_5505001 RAL-370 708 chr2R 5541934 5541953 chr2R 5542187 5542204 6 253 3.5 3.0 3.2 1.4 270 chr2R 5541934 intron CG30438 + chr2R 5542069 intron CG30438 + chr2R 5542204 intron CG30438 + chr2R_6_5540001 chr2R_5540001 RAL-370 709 chr2R 5543204 5543223 chr2R 5547308 5547327 invader1 5 4103 0.0 5.0 2.5 1.4 4123 chr2R 5543204 intron CG30438 + chr2R 5545266 intron CG30438 + chr2R 5547327 intron CG30438 + chr2R_5_5545001 chr2R_5545001 RAL-370 710 chr2R 5581403 5581406 chr2R 5627632 5627635 4 46229 11.5 8.5 10.0 0.4 46232 chr2R 5581403 intergenic not near genes chr2R 5604519 intron Fis1 - chr2R 5627635 intergenic not near genes chr2R_4_5600001 chr2R_5600001 RAL-370 711 chr2R 5640000 5640046 chr2R 5640096 5640140 17 96 6.5 4.5 5.5 2.6 140 chr2R 5640000 intergenic not near genes chr2R 5640070 intergenic not near genes chr2R 5640140 intergenic not near genes chr2R_17_5640001 chr2R_5640001 RAL-370 712 chr2R 5750430 5750450 chr2R 5750541 5750562 8 111 5.5 7.0 6.2 1.1 132 chr2R 5750430 intergenic not near genes chr2R 5750496 intergenic not near genes chr2R 5750562 intergenic not near genes chr2R_8_5750001 chr2R_5750001 RAL-370 713 chr2R 5772509 5772547 chr2R 5772622 5772658 13 110 5.0 2.0 3.5 2.9 149 chr2R 5772509 3` UTR Gp210 + chr2R 5772584 3` UTR Gp210 + chr2R 5772658 3` UTR Gp210 + chr2R_13_5770001 chr2R_5770001 RAL-370 714 chr2R 5772819 5772856 chr2R 5772921 5772958 5 101 3.0 3.0 3.0 1.2 139 chr2R 5772819 3` UTR Gp210 + chr2R 5772888 3` UTR Gp210 + chr2R 5772958 3` UTR Gp210 + chr2R_5_5770001 chr2R_5770001 RAL-370 715 chr2R 5779228 5779280 chr2R 5779471 5779523 16 243 4.5 2.5 3.5 3.6 295 chr2R 5779228 intron ZnT41F - chr2R 5779376 intron ZnT41F - chr2R 5779523 intron ZnT41F - chr2R_16_5775001 chr2R_5775001 RAL-370 716 chr2R 5790443 5790494 chr2R 5790548 5790599 5 105 4.5 1.5 3.0 1.2 156 chr2R 5790443 intergenic not near genes chr2R 5790521 intergenic not near genes chr2R 5790599 intergenic not near genes chr2R_5_5790001 chr2R_5790001 RAL-370 717 chr2R 5826779 5826822 chr2R 5827017 5827060 19 236 6.0 7.0 6.5 2.5 281 chr2R 5826779 intron dpr12 + chr2R 5826920 intron dpr12 + chr2R 5827060 intron dpr12 + chr2R_19_5825001 chr2R_5825001 RAL-370 718 chr2R 5840734 5840783 chr2R 5840837 5840885 13 99 4.5 4.5 4.5 2.4 151 chr2R 5840734 intron dpr12 + chr2R 5840810 intron dpr12 + chr2R 5840885 intron dpr12 + chr2R_13_5840001 chr2R_5840001 RAL-370 719 chr2R 5869263 5869308 chr2R 5874358 5874389 flea 22 5092 5.0 9.0 7.0 2.8 5126 chr2R 5869263 intergenic not near genes chr2R 5871826 intergenic not near genes chr2R 5874389 intergenic not near genes chr2R_22_5870001 chr2R_5870001 RAL-370 720 chr2R 5876855 5876905 chr2R 5876976 5877000 8 112 2.5 4.5 3.5 1.8 145 chr2R 5876855 intergenic not near genes chr2R 5876928 intergenic not near genes chr2R 5877000 intergenic not near genes chr2R_8_5875001 chr2R_5875001 RAL-370 721 chr2R 5878905 5878958 chr2R 5879008 5879058 9 101 2.5 5.5 4.0 1.8 153 chr2R 5878905 intergenic CG44438 - chr2R 5878982 intergenic CG44438 - chr2R 5879058 intergenic CG44438 - chr2R_9_5875001 chr2R_5875001 RAL-370 722 chr2R 5885354 5885372 chr2R 5885503 5885521 4 149 4.5 2.5 3.5 0.9 167 chr2R 5885354 5` UTR CR44125 + chr2R 5885438 5` UTR CR44125 + chr2R 5885521 5` UTR CR44125 + chr2R_4_5885001 chr2R_5885001 RAL-370 723 chr2R 5902145 5902190 chr2R 5909722 5909769 17.6 4 7578 2.5 4.0 3.2 1.0 7624 chr2R 5902145 intron CG43366 + chr2R 5905957 intron CG43366 + chr2R 5909769 intron CG43366 + chr2R_4_5905001 chr2R_5905001 RAL-370 724 chr2R 6096717 6096745 chr2R 6101917 6101933 BS 5 5206 6.0 3.0 4.5 0.9 5216 chr2R 6096717 intron EcR - chr2R 6099325 intron EcR - chr2R 6101933 intron EcR - chr2R_5_6095001 chr2R_6095001 RAL-370 725 chr2R 6129306 6129356 chr2R 6129404 6129453 18 97 3.5 2.0 2.8 4.7 147 chr2R 6129306 intron EcR - chr2R 6129380 intron EcR - chr2R 6129453 intron EcR - chr2R_18_6125001 chr2R_6125001 RAL-370 726 chr2R 6178101 6178132 chr2R 6178247 6178278 7 146 3.5 3.0 3.2 1.7 177 chr2R 6178101 intergenic not near genes chr2R 6178190 intergenic not near genes chr2R 6178278 intergenic not near genes chr2R_7_6175001 chr2R_6175001 RAL-370 727 chr2R 6178684 6178710 chr2R 6178767 6178816 8 104 4.0 5.5 4.8 1.4 132 chr2R 6178684 intergenic not near genes chr2R 6178750 intergenic not near genes chr2R 6178816 intergenic not near genes chr2R_8_6175001 chr2R_6175001 RAL-370 728 chr2R 6194666 6194693 chr2R 6194769 6194772 6 97 6.0 4.5 5.2 1.0 106 chr2R 6194666 intron Ptr - chr2R 6194719 intron Ptr - chr2R 6194772 intron Ptr - chr2R_6_6190001 chr2R_6190001 RAL-370 729 chr2R 6247791 6247837 chr2R 6247888 6247916 12 96 3.0 7.0 5.0 2.0 125 chr2R 6247791 intron Pld + chr2R 6247854 intron Pld + chr2R 6247916 intron Pld + chr2R_12_6245001 chr2R_6245001 RAL-370 730 chr2R 6500940 6500986 chr2R 6501053 6501101 17 113 6.0 4.0 5.0 2.8 161 chr2R 6500940 intergenic not near genes chr2R 6501020 intergenic not near genes chr2R 6501101 intergenic not near genes chr2R_17_6500001 chr2R_6500001 RAL-370 731 chr2R 6530751 6530777 chr2R 6530851 6530877 5 99 5.0 2.5 3.8 1.0 126 chr2R 6530751 intron jing + chr2R 6530814 intron jing + chr2R 6530877 intron jing + chr2R_5_6530001 chr2R_6530001 RAL-370 732 chr2R 6539834 6539850 chr2R 6539963 6539984 6 133 5.0 4.0 4.5 1.1 150 chr2R 6539834 intron jing + chr2R 6539909 intron jing + chr2R 6539984 intron jing + chr2R_6_6535001 chr2R_6535001 RAL-370 733 chr2R 6550906 6550952 chr2R 6551002 6551033 15 95 5.5 6.5 6.0 2.1 127 chr2R 6550906 intron jing + chr2R 6550970 intron jing + chr2R 6551033 intron jing + chr2R_15_6550001 chr2R_6550001 RAL-370 734 chr2R 6579754 6579802 chr2R 6584860 6584904 flea 9 5105 1.5 3.0 2.2 2.8 5150 chr2R 6579754 intron jing + chr2R 6582329 intron jing + chr2R 6584904 intron jing + chr2R_9_6580001 chr2R_6580001 RAL-370 735 chr2R 6594043 6594053 chr2R 6594199 6594209 6 156 0.0 6.5 3.2 1.4 166 chr2R 6594043 intron jing + chr2R 6594126 intron jing + chr2R 6594209 intron jing + chr2R_6_6590001 chr2R_6590001 RAL-370 736 chr2R 6597862 6597903 chr2R 6597969 6597994 11 104 4.5 4.5 4.5 2.0 132 chr2R 6597862 intron jing + chr2R 6597928 intron jing + chr2R 6597994 intron jing + chr2R_11_6595001 chr2R_6595001 RAL-370 737 chr2R 6607908 6607954 chr2R 6608029 6608076 15 118 5.0 3.5 4.2 2.9 168 chr2R 6607908 intron jing + chr2R 6607992 intron jing + chr2R 6608076 intron jing + chr2R_15_6605001 chr2R_6605001 RAL-370 738 chr2R 6699575 6699616 chr2R 6699679 6699721 7 104 1.0 2.0 1.5 2.8 146 chr2R 6699575 intergenic Rab2 + chr2R 6699648 intergenic Rab2 + chr2R 6699721 intergenic Rab2 +,CG3409 -,CG45092 - chr2R_7_6695001 chr2R_6695001 RAL-370 739 chr2R 6706955 6706990 chr2R 6707236 6707271 15 280 5.0 7.5 6.2 2.1 316 chr2R 6706955 intron,intron CG3409 -,CG45092 - chr2R 6707113 intron,intron CG3409 -,CG45092 - chr2R 6707271 intron,intron,3` UTR CG3409 -,CG45092 -,mir-4975 - chr2R_15_6705001 chr2R_6705001 RAL-370 740 chr2R 6712568 6712599 chr2R 6712685 6712716 15 116 7.0 6.0 6.5 2.0 148 chr2R 6712568 intron,intron CG3409 -,CG45092 - chr2R 6712642 intron,intron CG3409 -,CG45092 - chr2R 6712716 intron,intron CG3409 -,CG45092 - chr2R_15_6710001 chr2R_6710001 RAL-370 741 chr2R 6738841 6738876 chr2R 6738942 6738978 10 100 6.0 9.5 7.8 1.1 137 chr2R 6738841 intron l(2)01289 - chr2R 6738910 intron l(2)01289 - chr2R 6738978 intron l(2)01289 - chr2R_10_6735001 chr2R_6735001 RAL-370 742 chr2R 6846289 6846329 chr2R 6846386 6846390 7 92 0.5 5.0 2.8 1.8 101 chr2R 6846289 intergenic not near genes chr2R 6846340 intergenic not near genes chr2R 6846390 intergenic not near genes chr2R_7_6845001 chr2R_6845001 RAL-370 743 chr2R 6879462 6879490 chr2R 6879562 6879590 11 98 5.0 1.0 3.0 2.8 128 chr2R 6879462 intron,3` UTR CR44169 +,Spn42Db - chr2R 6879526 intron,3` UTR CR44169 +,Spn42Db - chr2R 6879590 intron,3` UTR CR44169 +,Spn42Db - chr2R_11_6875001 chr2R_6875001 RAL-370 744 chr2R 6948061 6948099 chr2R 6948157 6948195 9 96 3.5 3.5 3.5 2.0 134 chr2R 6948061 intron,intron mim -,CheB42c - chr2R 6948128 intron,intron mim -,CheB42c - chr2R 6948195 intron,intron mim -,CheB42c - chr2R_9_6945001 chr2R_6945001 RAL-370 745 chr2R 6952155 6952183 chr2R 6959755 6959783 opus 6 7600 3.0 3.0 3.0 1.5 7628 chr2R 6952155 intron,intron,exon mim -,CheB42c -,ppk25 + chr2R 6955969 intron,intron mim -,CheB42c - chr2R 6959783 intron,intron mim -,CheB42c - chr2R_6_6955001 chr2R_6955001 RAL-370 746 chr2R 7153151 7153185 chr2R 7153257 7153291 7 105 3.0 5.0 4.0 1.4 140 chr2R 7153151 intron,intron pk +,Spn43Ab - chr2R 7153221 intron,intron pk +,Spn43Ab - chr2R 7153291 intron,intron pk +,Spn43Ab - chr2R_7_7150001 chr2R_7150001 RAL-370 747 chr2R 7196554 7196591 chr2R 7201349 7201386 F-element 4 4795 6.5 0.0 3.2 1.0 4832 chr2R 7196554 intron pk + chr2R 7198970 intron pk + chr2R 7201386 intron pk + chr2R_4_7195001 chr2R_7195001 RAL-370 748 chr2R 7205095 7205135 chr2R 7205192 7205235 7 97 4.0 1.5 2.8 1.8 140 chr2R 7205095 intron pk + chr2R 7205165 intron pk + chr2R 7205235 intron pk + chr2R_7_7205001 chr2R_7205001 RAL-370 749 chr2R 7209847 7209868 chr2R 7217615 7217635 roo 6 7768 1.5 12.0 6.8 0.8 7788 chr2R 7209847 intron pk + chr2R 7213741 intron pk + chr2R 7217635 intron pk + chr2R_6_7210001 chr2R_7210001 RAL-370 750 chr2R 7235810 7235845 chr2R 7240915 7240943 jockey 7 5106 6.0 2.5 4.2 1.3 5133 chr2R 7235810 intergenic not near genes chr2R 7238376 intergenic not near genes chr2R 7240943 intergenic not near genes chr2R_7_7235001 chr2R_7235001 RAL-370 751 chr2R 7242589 7242614 chr2R 7242689 7242720 4 104 1.5 1.0 1.2 1.8 131 chr2R 7242589 intergenic Ady43A - chr2R 7242654 intergenic Ady43A - chr2R 7242720 intergenic Ady43A - chr2R_4_7240001 chr2R_7240001 RAL-370 752 chr2R 7262190 7262204 chr2R 7269267 7269285 297 6 7076 3.5 5.5 4.5 1.1 7095 chr2R 7262190 intergenic not near genes chr2R 7265738 intergenic not near genes chr2R 7269285 intergenic not near genes chr2R_6_7265001 chr2R_7265001 RAL-370 753 chr2R 7371731 7371774 chr2R 7371853 7371898 14 119 4.0 2.0 3.0 3.5 167 chr2R 7371731 intron Dscam1 - chr2R 7371814 intron Dscam1 - chr2R 7371898 intron Dscam1 - chr2R_14_7370001 chr2R_7370001 RAL-370 754 chr2R 7417884 7418169 chr2R 7417990 7418266 11 94 4.0 5.5 4.8 1.9 382 chr2R 7417884 intergenic not near genes chr2R 7418075 intergenic not near genes chr2R 7418266 intergenic not near genes chr2R_11_7415001 chr2R_7415001 RAL-370 755 chr2R 7434886 7434911 chr2R 7439207 7439232 Juan 6 4321 2.5 5.5 4.0 1.2 4346 chr2R 7434886 intergenic so + chr2R 7437059 intergenic not near genes chr2R 7439232 intergenic not near genes chr2R_6_7435001 chr2R_7435001 RAL-370 756 chr2R 7551664 7551711 chr2R 7551775 7551821 17 109 5.5 5.0 5.2 2.7 157 chr2R 7551664 intron Corin + chr2R 7551742 intron Corin + chr2R 7551821 intron Corin + chr2R_17_7550001 chr2R_7550001 RAL-370 757 chr2R 7587555 7587586 chr2R 7587881 7587882 4 316 4.5 1.0 2.8 1.1 327 chr2R 7587555 intergenic CG1360 -,blow - chr2R 7587718 intergenic CG1360 - chr2R 7587882 3` UTR CG1360 - chr2R_4_7585001 chr2R_7585001 RAL-370 758 chr2R 7587590 7587595 chr2R 7587878 7587922 4 312 2.5 1.0 1.8 1.4 332 chr2R 7587590 intergenic CG1360 - chr2R 7587756 intergenic CG1360 - chr2R 7587922 3` UTR CG1360 - chr2R_4_7585001 chr2R_7585001 RAL-370 759 chr2R 7608389 7608425 chr2R 7613611 7613648 I-element 7 5221 3.0 4.5 3.8 1.5 5259 chr2R 7608389 intron CG1358 - chr2R 7611018 intron CG1358 - chr2R 7613648 intron CG1358 - chr2R_7_7610001 chr2R_7610001 RAL-370 760 chr2R 7642850 7642891 chr2R 7642950 7642991 18 99 4.5 7.0 5.8 2.6 141 chr2R 7642850 intron CG43340 + chr2R 7642920 intron CG43340 + chr2R 7642991 intron CG43340 + chr2R_18_7640001 chr2R_7640001 RAL-370 761 chr2R 7691995 7692015 chr2R 7692096 7692116 9 100 6.0 6.0 6.0 1.3 121 chr2R 7691995 intron CG1399 - chr2R 7692056 intron CG1399 - chr2R 7692116 intron CG1399 - chr2R_9_7690001 chr2R_7690001 RAL-370 762 chr2R 7692016 7692033 chr2R 7692094 7692134 8 97 3.5 6.0 4.8 1.4 118 chr2R 7692016 intron CG1399 - chr2R 7692075 intron CG1399 - chr2R 7692134 intron CG1399 - chr2R_8_7690001 chr2R_7690001 RAL-370 763 chr2R 7737890 7738183 chr2R 7737989 7738280 10 98 17.0 8.0 12.5 0.7 390 chr2R 7737890 intergenic not near genes chr2R 7738085 intergenic not near genes chr2R 7738280 intergenic not near genes chr2R_10_7735001 chr2R_7735001 RAL-370 764 chr2R 7815656 7815701 chr2R 7822145 7822190 Burdock 18 6488 4.0 7.5 5.8 2.6 6534 chr2R 7815656 intergenic CG1882 + chr2R 7818923 intergenic not near genes chr2R 7822190 3` UTR cathD - chr2R_18_7815001 chr2R_7815001 RAL-370 765 chr2R 7858798 7858815 chr2R 7858911 7858931 7 116 5.5 8.0 6.8 0.9 133 chr2R 7858798 intron Dgk - chr2R 7858864 intron Dgk - chr2R 7858931 intron Dgk - chr2R_7_7855001 chr2R_7855001 RAL-370 766 chr2R 7869175 7869203 chr2R 7873981 7874009 Doc 8 4805 8.0 6.5 7.2 1.0 4834 chr2R 7869175 intron Dgk - chr2R 7871592 intron Dgk - chr2R 7874009 intron Dgk - chr2R_8_7870001 chr2R_7870001 RAL-370 767 chr2R 7884176 7884230 chr2R 7884280 7884329 14 101 5.5 6.5 6.0 2.0 153 chr2R 7884176 intron Dgk - chr2R 7884252 intron Dgk - chr2R 7884329 intron Dgk - chr2R_14_7880001 chr2R_7880001 RAL-370 768 chr2R 7897150 7897155 chr2R 7897232 7897263 4 97 0.0 10.0 5.0 0.7 113 chr2R 7897150 intron CG30377 + chr2R 7897206 intron CG30377 + chr2R 7897263 intron CG30377 + chr2R_4_7895001 chr2R_7895001 RAL-370 769 chr2R 7916405 7916457 chr2R 7916510 7916547 12 103 4.0 5.0 4.5 2.2 142 chr2R 7916405 5` UTR CG12159 - chr2R 7916476 5` UTR CG12159 - chr2R 7916547 intergenic CG12159 -,Cul1 + chr2R_12_7915001 chr2R_7915001 RAL-370 770 chr2R 8015634 8015677 chr2R 8017677 8017720 9 2032 1.5 5.5 3.5 2.0 2086 chr2R 8015634 intergenic mir-4981 + chr2R 8016677 intergenic not near genes chr2R 8017720 intergenic not near genes chr2R_9_8015001 chr2R_8015001 RAL-370 771 chr2R 8277637 8277668 chr2R 8277735 8277744 8 97 3.0 4.0 3.5 1.8 107 chr2R 8277637 5` UTR CR44280 + chr2R 8277690 5` UTR CR44280 + chr2R 8277744 5` UTR CR44280 + chr2R_8_8275001 chr2R_8275001 RAL-370 772 chr2R 8330849 8330888 chr2R 8331354 8331394 roo 12 506 5.5 6.0 5.8 1.8 545 chr2R 8330849 intron pdm3 + chr2R 8331122 intron pdm3 + chr2R 8331394 intron pdm3 + chr2R_12_8330001 chr2R_8330001 RAL-370 773 chr2R 8338626 8338668 chr2R 8338728 8338770 11 102 0.5 3.5 2.0 3.7 144 chr2R 8338626 intron pdm3 + chr2R 8338698 intron pdm3 + chr2R 8338770 intron pdm3 + chr2R_11_8335001 chr2R_8335001 RAL-370 774 chr2R 8398209 8398233 chr2R 8402997 8403034 Doc 8 4798 3.0 3.0 3.0 2.0 4825 chr2R 8398209 intron CG2121 - chr2R 8400622 intron CG2121 - chr2R 8403034 intron CG2121 - chr2R_8_8400001 chr2R_8400001 RAL-370 775 chr2R 8483948 8483993 chr2R 8484044 8484089 14 93 5.0 3.5 4.2 2.7 141 chr2R 8483948 intron mtt - chr2R 8484018 intron mtt - chr2R 8484089 intron mtt - chr2R_14_8480001 chr2R_8480001 RAL-370 776 chr2R 8508769 8508793 chr2R 8508855 8508891 5 88 1.0 5.5 3.2 1.2 122 chr2R 8508769 intron mtt - chr2R 8508830 intron mtt - chr2R 8508891 intron mtt - chr2R_5_8505001 chr2R_8505001 RAL-370 777 chr2R 8518784 8518798 chr2R 12066271 12066287 6 3547488 15.0 0.0 7.5 0.7 3547503 chr2R 8518784 intron mtt - chr2R 10292536 intron CAP + chr2R 12066287 intron CG8888 - chr2R_6_10290001 chr2R_10290001 RAL-370 778 chr2R 8612561 8612610 chr2R 8612658 8612706 8 97 4.5 1.5 3.0 2.0 145 chr2R 8612561 intron CG8642 - chr2R 8612634 intron CG8642 - chr2R 8612706 intron CG8642 - chr2R_8_8610001 chr2R_8610001 RAL-370 779 chr2R 8635926 8635934 chr2R 8636024 8636032 4 96 0.0 8.5 4.2 0.8 106 chr2R 8635926 intergenic not near genes chr2R 8635979 intergenic not near genes chr2R 8636032 intergenic not near genes chr2R_4_8635001 chr2R_8635001 RAL-370 780 chr2R 8668408 8668453 chr2R 8668516 8668559 14 105 2.5 1.5 2.0 4.7 151 chr2R 8668408 intron Acsl + chr2R 8668484 intron Acsl + chr2R 8668559 intron Acsl + chr2R_14_8665001 chr2R_8665001 RAL-370 781 chr2R 8714712 8714722 chr2R 8714782 8714829 4 89 0.0 4.0 2.0 1.3 117 chr2R 8714712 3` UTR PGRP-SC1b + chr2R 8714770 3` UTR PGRP-SC1b + chr2R 8714829 3` UTR PGRP-SC1b + chr2R_4_8710001 chr2R_8710001 RAL-370 782 chr2R 8722759 8722791 chr2R 8723008 8723012 pogo 12 253 10.0 2.5 6.2 1.7 253 chr2R 8722759 intron CG14767 - chr2R 8722886 intron CG14767 - chr2R 8723012 intron CG14767 - chr2R_12_8720001 chr2R_8720001 RAL-370 783 chr2R 8833408 8833440 chr2R 8833510 8833525 15 98 7.5 4.0 5.8 2.2 117 chr2R 8833408 intron sns + chr2R 8833466 intron sns + chr2R 8833525 intron sns + chr2R_15_8830001 chr2R_8830001 RAL-370 784 chr2R 8847182 8847198 chr2R 8847290 8847318 4 114 4.5 10.0 7.2 0.5 136 chr2R 8847182 intron sns + chr2R 8847250 intron sns + chr2R 8847318 intron sns + chr2R_4_8845001 chr2R_8845001 RAL-370 785 chr2R 8966132 8966174 chr2R 8966242 8966284 12 110 8.5 5.0 6.8 1.5 152 chr2R 8966132 intron CG8216 - chr2R 8966208 intron CG8216 - chr2R 8966284 intron CG8216 - chr2R_12_8965001 chr2R_8965001 RAL-370 786 chr2R 9047403 9047437 chr2R 9047518 9047551 8 115 3.5 6.5 5.0 1.3 148 chr2R 9047403 intron CG13743 - chr2R 9047477 intron CG13743 - chr2R 9047551 intron CG13743 - chr2R_8_9045001 chr2R_9045001 RAL-370 787 chr2R 9051432 9051443 chr2R 9051539 9051549 5 107 7.0 0.0 3.5 1.1 117 chr2R 9051432 intron CG13743 - chr2R 9051490 intron CG13743 - chr2R 9051549 intron CG13743 - chr2R_5_9050001 chr2R_9050001 RAL-370 788 chr2R 9076118 9076165 chr2R 9076213 9076261 11 95 1.0 4.0 2.5 3.1 143 chr2R 9076118 intron ana + chr2R 9076190 intron ana + chr2R 9076261 intron ana + chr2R_11_9075001 chr2R_9075001 RAL-370 789 chr2R 9078462 9078490 chr2R 9078560 9078587 6 97 6.0 4.0 5.0 1.0 125 chr2R 9078462 intergenic CG8083 + chr2R 9078524 intergenic CG8083 + chr2R 9078587 intergenic CG8083 + chr2R_6_9075001 chr2R_9075001 RAL-370 790 chr2R 9132087 9132136 chr2R 9132184 9132232 9 97 1.0 3.5 2.2 2.8 145 chr2R 9132087 intergenic CG18659 -,Hydr1 + chr2R 9132160 intergenic CG18659 -,Hydr1 + chr2R 9132232 intergenic CG18659 -,Hydr1 + chr2R_9_9130001 chr2R_9130001 RAL-370 791 chr2R 9151287 9151328 chr2R 9157772 9157818 Burdock 7 6489 6.0 4.0 5.0 1.2 6531 chr2R 9151287 exon CG30345 + chr2R 9154552 intergenic not near genes chr2R 9157818 intergenic CG8008 - chr2R_7_9150001 chr2R_9150001 RAL-370 792 chr2R 9161957 9162003 chr2R 9162061 9162101 13 100 4.5 5.5 5.0 2.2 144 chr2R 9161957 5` UTR CR44283 + chr2R 9162029 intergenic CG8046 -,CR44283 + chr2R 9162101 3` UTR CG8046 - chr2R_13_9160001 chr2R_9160001 RAL-370 793 chr2R 9182406 9182450 chr2R 9182529 9182573 13 122 6.0 6.0 6.0 1.9 167 chr2R 9182406 intron ltd - chr2R 9182490 intron ltd - chr2R 9182573 intron ltd - chr2R_13_9180001 chr2R_9180001 RAL-370 794 chr2R 9212689 9212721 chr2R 9213183 9213227 roo 11 503 4.5 5.0 4.8 1.9 538 chr2R 9212689 intergenic CR45309 + chr2R 9212958 intergenic CR45309 + chr2R 9213227 5` UTR CR45309 + chr2R_11_9210001 chr2R_9210001 RAL-370 795 chr2R 9230210 9230242 chr2R 9230307 9230342 8 98 5.0 4.5 4.8 1.4 132 chr2R 9230210 intron hig - chr2R 9230276 intron hig - chr2R 9230342 exon hig - chr2R_8_9230001 chr2R_9230001 RAL-370 796 chr2R 9267977 9268012 chr2R 9268083 9268115 10 105 3.5 2.0 2.8 2.6 138 chr2R 9267977 intron Pkn - chr2R 9268046 intron Pkn - chr2R 9268115 intron Pkn - chr2R_10_9265001 chr2R_9265001 RAL-370 797 chr2R 9368132 9368149 chr2R 9368212 9368225 7 85 1.5 0.0 0.8 3.9 93 chr2R 9368132 intron CG13954 - chr2R 9368178 intron CG13954 - chr2R 9368225 intron CG13954 - chr2R_7_9365001 chr2R_9365001 RAL-370 798 chr2R 9378094 9378104 chr2R 9378196 9378200 5 101 7.0 2.0 4.5 0.9 106 chr2R 9378094 intron CG13954 - chr2R 9378147 intron CG13954 - chr2R 9378200 intron CG13954 - chr2R_5_9375001 chr2R_9375001 RAL-370 799 chr2R 9378107 9378141 chr2R 9378192 9378224 9 93 2.5 1.0 1.8 3.2 117 chr2R 9378107 intron CG13954 - chr2R 9378166 intron CG13954 - chr2R 9378224 intron CG13954 - chr2R_9_9375001 chr2R_9375001 RAL-370 800 chr2R 9408209 9408252 chr2R 9408311 9408354 14 102 3.5 5.0 4.2 2.7 145 chr2R 9408209 intron wun - chr2R 9408282 intron wun - chr2R 9408354 intron wun - chr2R_14_9405001 chr2R_9405001 RAL-370 801 chr2R 9429777 9429828 chr2R 9429901 9429953 18 121 2.0 2.5 2.2 5.6 176 chr2R 9429777 intron Pdk + chr2R 9429865 intron Pdk + chr2R 9429953 intron Pdk + chr2R_18_9425001 chr2R_9425001 RAL-370 802 chr2R 9478472 9478504 chr2R 9478570 9478596 9 96 4.5 7.0 5.8 1.3 124 chr2R 9478472 intergenic Camta + chr2R 9478534 intergenic Camta + chr2R 9478596 intergenic not near genes chr2R_9_9475001 chr2R_9475001 RAL-370 803 chr2R 9480067 9480102 chr2R 9490618 9490653 roo 4 10551 2.5 6.5 4.5 0.7 10586 chr2R 9480067 intergenic not near genes chr2R 9485360 intergenic not near genes chr2R 9490653 intergenic not near genes chr2R_4_9485001 chr2R_9485001 RAL-370 804 chr2R 9535589 9535640 chr2R 9535752 9535803 10 162 3.5 3.0 3.2 2.4 214 chr2R 9535589 intron brp + chr2R 9535696 intron brp + chr2R 9535803 intron brp + chr2R_10_9535001 chr2R_9535001 RAL-370 805 chr2R 9541612 9541648 chr2R 9541709 9541739 15 96 0.0 4.5 2.2 4.7 127 chr2R 9541612 intergenic brp +,CG1888 - chr2R 9541676 intergenic brp +,CG1888 - chr2R 9541739 intergenic brp +,CG1888 - chr2R_15_9540001 chr2R_9540001 RAL-370 806 chr2R 9561826 9561840 chr2R 9561934 9561948 4 108 0.0 0.0 0.0 4.0 122 chr2R 9561826 3` UTR,intron CR45281 -,CG1809 + chr2R 9561887 3` UTR,intron CR45281 -,CG1809 + chr2R 9561948 3` UTR,intron CR45281 -,CG1809 + chr2R_4_9560001 chr2R_9560001 RAL-370 807 chr2R 9699405 9699427 chr2R 9699510 9699531 7 104 6.0 7.5 6.8 0.9 126 chr2R 9699405 intergenic not near genes chr2R 9699468 intergenic not near genes chr2R 9699531 intergenic not near genes chr2R_7_9695001 chr2R_9695001 RAL-370 808 chr2R 9699430 9699434 chr2R 9699502 9699540 5 94 4.0 7.0 5.5 0.8 110 chr2R 9699430 intergenic not near genes chr2R 9699485 intergenic not near genes chr2R 9699540 intergenic not near genes chr2R_5_9695001 chr2R_9695001 RAL-370 809 chr2R 9726600 9726640 chr2R 9734171 9734211 17.6 9 7571 2.5 4.5 3.5 2.0 7611 chr2R 9726600 intron sqa - chr2R 9730406 intron sqa - chr2R 9734211 intron sqa - chr2R_9_9730001 chr2R_9730001 RAL-370 810 chr2R 9777548 9777573 chr2R 9777681 9777735 5 142 4.0 1.5 2.8 1.3 187 chr2R 9777548 intron CG1688 - chr2R 9777642 intron CG1688 - chr2R 9777735 intron CG1688 - chr2R_5_9775001 chr2R_9775001 RAL-370 811 chr2R 9807410 9807462 chr2R 9807573 9807626 7 162 0.0 4.0 2.0 2.3 216 chr2R 9807410 intergenic not near genes chr2R 9807518 intergenic not near genes chr2R 9807626 intergenic not near genes chr2R_7_9805001 chr2R_9805001 RAL-370 812 chr2R 9862738 9862793 chr2R 9862834 9862875 15 91 4.5 7.5 6.0 2.1 137 chr2R 9862738 intergenic not near genes chr2R 9862806 intergenic not near genes chr2R 9862875 intergenic not near genes chr2R_15_9860001 chr2R_9860001 RAL-370 813 chr2R 9871060 9871072 chr2R 9871527 9871578 roo 4 496 0.0 6.5 3.2 1.0 518 chr2R 9871060 intron cbx - chr2R 9871319 intron cbx - chr2R 9871578 intron,5` UTR cbx -,CG18446 + chr2R_4_9870001 chr2R_9870001 RAL-370 814 chr2R 9950301 9950325 chr2R 9950379 9950388 5 86 3.5 2.5 3.0 1.2 87 chr2R 9950301 intron Mef2 - chr2R 9950344 intron Mef2 - chr2R 9950388 intron Mef2 - chr2R_5_9950001 chr2R_9950001 RAL-370 815 chr2R 10017629 10017650 chr2R 10017728 10017748 6 99 8.5 2.5 5.5 0.9 119 chr2R 10017629 intron Pka-R2 - chr2R 10017688 intron Pka-R2 - chr2R 10017748 intron Pka-R2 - chr2R_6_10015001 chr2R_10015001 RAL-370 816 chr2R 10017656 10017677 chr2R 10017727 10017776 10 95 5.5 2.0 3.8 2.1 120 chr2R 10017656 intron Pka-R2 - chr2R 10017716 intron Pka-R2 - chr2R 10017776 intron Pka-R2 - chr2R_10_10015001 chr2R_10015001 RAL-370 817 chr2R 10122721 10122738 chr2R 10122951 10122967 9 229 5.0 3.5 4.2 1.7 246 chr2R 10122721 intergenic Ccs - chr2R 10122844 intergenic Ccs - chr2R 10122967 intergenic Ccs - chr2R_9_10120001 chr2R_10120001 RAL-370 818 chr2R 10129685 10129713 chr2R 10130095 10130117 9 410 1.5 5.5 3.5 2.0 432 chr2R 10129685 intron gem + chr2R 10129901 intron gem + chr2R 10130117 intron gem + chr2R_9_10125001 chr2R_10125001 RAL-370 819 chr2R 10171091 10171145 chr2R 10171195 10171249 22 104 1.0 6.5 3.8 4.6 158 chr2R 10171091 intron KCNQ - chr2R 10171170 intron KCNQ - chr2R 10171249 intron KCNQ - chr2R_22_10170001 chr2R_10170001 RAL-370 820 chr2R 10176856 10176905 chr2R 10186046 10186095 roo 9 9190 2.5 1.0 1.8 3.2 9239 chr2R 10176856 intron KCNQ - chr2R 10181476 intron KCNQ - chr2R 10186095 intron KCNQ - chr2R_9_10180001 chr2R_10180001 RAL-370 821 chr2R 10190430 10190471 chr2R 10190532 10190544 6 94 7.5 4.0 5.8 0.9 114 chr2R 10190430 intron KCNQ - chr2R 10190487 intron KCNQ - chr2R 10190544 intron KCNQ - chr2R_6_10190001 chr2R_10190001 RAL-370 822 chr2R 10198209 10198228 chr2R 10198312 10198331 5 103 2.5 3.0 2.8 1.3 122 chr2R 10198209 intron CG34221 - chr2R 10198270 intron CG34221 - chr2R 10198331 intron CG34221 - chr2R_5_10195001 chr2R_10195001 RAL-370 823 chr2R 10198235 10198252 chr2R 10198307 10198352 7 97 1.5 3.0 2.2 2.2 117 chr2R 10198235 intron CG34221 - chr2R 10198294 intron CG34221 - chr2R 10198352 intron CG34221 - chr2R_7_10195001 chr2R_10195001 RAL-370 824 chr2R 10203631 10203661 chr2R 10203735 10203766 11 104 3.5 5.0 4.2 2.1 135 chr2R 10203631 intergenic not near genes chr2R 10203698 intergenic not near genes chr2R 10203766 intergenic not near genes chr2R_11_10200001 chr2R_10200001 RAL-370 825 chr2R 10206303 10206334 chr2R 10206420 10206424 7 113 4.5 1.5 3.0 1.8 121 chr2R 10206303 3` UTR,3` UTR CG12912 -,Hr46 - chr2R 10206364 3` UTR,3` UTR CG12912 -,Hr46 - chr2R 10206424 3` UTR,3` UTR CG12912 -,Hr46 - chr2R_7_10205001 chr2R_10205001 RAL-370 826 chr2R 10216213 10216216 chr2R 10216274 10216312 4 87 5.5 2.5 4.0 0.8 99 chr2R 10216213 intron,intron CG12912 -,Hr46 - chr2R 10216262 intron,intron CG12912 -,Hr46 - chr2R 10216312 intron,intron CG12912 -,Hr46 - chr2R_4_10215001 chr2R_10215001 RAL-370 827 chr2R 10225715 10225735 chr2R 10225817 10225837 9 102 2.5 2.0 2.2 2.8 122 chr2R 10225715 intron,intron CG12912 -,Hr46 - chr2R 10225776 intron,intron CG12912 -,Hr46 - chr2R 10225837 intron,intron CG12912 -,Hr46 - chr2R_9_10225001 chr2R_10225001 RAL-370 828 chr2R 10263172 10263205 chr2R 10263277 10263311 4 106 0.5 1.5 1.0 2.0 139 chr2R 10263172 3` UTR CR30009 - chr2R 10263242 3` UTR CR30009 - chr2R 10263311 3` UTR CR30009 - chr2R_4_10260001 chr2R_10260001 RAL-370 829 chr2R 10270547 10270596 chr2R 10270656 10270705 12 107 5.0 4.5 4.8 2.1 158 chr2R 10270547 intron CAP + chr2R 10270626 intron CAP + chr2R 10270705 intron CAP + chr2R_12_10270001 chr2R_10270001 RAL-370 830 chr2R 10290107 10290141 chr2R 10290196 10290227 10 97 5.0 2.0 3.5 2.2 120 chr2R 10290107 intron CAP + chr2R 10290167 intron CAP + chr2R 10290227 intron CAP + chr2R_10_10290001 chr2R_10290001 RAL-370 831 chr2R 10370490 10370502 chr2R 10370653 10370665 4 163 6.5 2.5 4.5 0.7 175 chr2R 10370490 intron CG42732 - chr2R 10370578 intron CG42732 - chr2R 10370665 intron CG42732 - chr2R_4_10370001 chr2R_10370001 RAL-370 832 chr2R 10409045 10409086 chr2R 10409142 10409182 6 96 0.5 6.0 3.2 1.4 137 chr2R 10409045 intron CG42732 - chr2R 10409114 intron CG42732 - chr2R 10409182 intron,exon CG42732 -,CG33477 - chr2R_6_10405001 chr2R_10405001 RAL-370 833 chr2R 10429003 10429050 chr2R 10429099 10429147 21 93 5.0 5.0 5.0 3.5 144 chr2R 10429003 intergenic not near genes chr2R 10429075 intergenic not near genes chr2R 10429147 intergenic not near genes chr2R_21_10425001 chr2R_10425001 RAL-370 834 chr2R 10454082 10454130 chr2R 10454176 10454218 19 93 5.5 5.5 5.5 2.9 136 chr2R 10454082 intron,intron Galphao +,Cyp49a1 - chr2R 10454150 intron,intron Galphao +,Cyp49a1 - chr2R 10454218 intron,intron Galphao +,Cyp49a1 - chr2R_19_10450001 chr2R_10450001 RAL-370 835 chr2R 10469012 10469053 chr2R 10469148 10469189 11 135 3.0 4.0 3.5 2.4 177 chr2R 10469012 intron CG11777 + chr2R 10469100 intron CG11777 + chr2R 10469189 intron CG11777 + chr2R_11_10465001 chr2R_10465001 RAL-370 836 chr2R 10550334 10550365 chr2R 10550441 10550471 5 107 3.0 0.0 1.5 2.0 137 chr2R 10550334 intergenic not near genes chr2R 10550402 intergenic not near genes chr2R 10550471 intergenic not near genes chr2R_5_10550001 chr2R_10550001 RAL-370 837 chr2R 10563232 10563248 chr2R 10563350 10563363 4 117 0.0 6.0 3.0 1.0 131 chr2R 10563232 intron psq + chr2R 10563298 intron psq + chr2R 10563363 intron psq + chr2R_4_10560001 chr2R_10560001 RAL-370 838 chr2R 10582104 10582136 chr2R 10582215 10582250 7 114 3.5 0.0 1.8 2.5 146 chr2R 10582104 intron psq + chr2R 10582177 intron psq + chr2R 10582250 intron psq + chr2R_7_10580001 chr2R_10580001 RAL-370 839 chr2R 10621220 10621258 chr2R 10621354 10621392 8 133 3.0 3.5 3.2 1.9 172 chr2R 10621220 intron CG11883 + chr2R 10621306 intron CG11883 + chr2R 10621392 intron CG11883 + chr2R_8_10620001 chr2R_10620001 RAL-370 840 chr2R 10644043 10644079 chr2R 10644141 10644177 10 98 5.5 0.0 2.8 2.6 134 chr2R 10644043 intron Git - chr2R 10644110 intron Git - chr2R 10644177 intron Git - chr2R_10_10640001 chr2R_10640001 RAL-370 841 chr2R 10790121 10790176 chr2R 10790228 10790271 18 103 4.5 5.0 4.8 3.1 150 chr2R 10790121 intron CG33144 - chr2R 10790196 intron CG33144 - chr2R 10790271 intron CG33144 - chr2R_18_10790001 chr2R_10790001 RAL-370 842 chr2R 10827321 10827360 chr2R 10827428 10827468 12 106 1.0 5.0 3.0 3.0 147 chr2R 10827321 exon CG12325 + chr2R 10827394 3` UTR CG12325 + chr2R 10827468 3` UTR,3` UTR CG12325 +,CG12344 - chr2R_12_10825001 chr2R_10825001 RAL-370 843 chr2R 10873326 10873374 chr2R 10873433 10873481 5 107 2.5 2.0 2.2 1.6 155 chr2R 10873326 intron CG30015 - chr2R 10873404 intron CG30015 - chr2R 10873481 intron CG30015 - chr2R_5_10870001 chr2R_10870001 RAL-370 844 chr2R 10948023 10948055 chr2R 10955593 10955619 17.6 4 7566 1.0 7.0 4.0 0.8 7596 chr2R 10948023 intergenic not near genes chr2R 10951821 intergenic not near genes chr2R 10955619 intergenic not near genes chr2R_4_10950001 chr2R_10950001 RAL-370 845 chr2R 10959088 10959102 chr2R 10959187 10959201 6 98 2.0 4.5 3.2 1.4 113 chr2R 10959088 intergenic not near genes chr2R 10959144 intergenic not near genes chr2R 10959201 intergenic not near genes chr2R_6_10955001 chr2R_10955001 RAL-370 846 chr2R 10976334 10976383 chr2R 10976437 10976486 6 100 1.0 2.5 1.8 2.1 152 chr2R 10976334 intergenic not near genes chr2R 10976410 intergenic not near genes chr2R 10976486 intergenic not near genes chr2R_6_10975001 chr2R_10975001 RAL-370 847 chr2R 11009795 11009818 chr2R 11018989 11019012 roo 9 9193 7.0 2.5 4.8 1.6 9217 chr2R 11009795 intron luna - chr2R 11014404 intron luna - chr2R 11019012 intron luna - chr2R_9_11010001 chr2R_11010001 RAL-370 848 chr2R 11009829 11009842 chr2R 11018986 11019036 roo 5 9168 5.0 2.5 3.8 1.0 9207 chr2R 11009829 intron luna - chr2R 11014432 intron luna - chr2R 11019036 intron luna - chr2R_5_11010001 chr2R_11010001 RAL-370 849 chr2R 11102849 11102891 chr2R 11102948 11102976 7 90 4.0 0.0 2.0 2.3 127 chr2R 11102849 intron luna - chr2R 11102912 intron luna - chr2R 11102976 intron luna - chr2R_7_11100001 chr2R_11100001 RAL-370 850 chr2R 11129832 11129848 chr2R 11129898 11129951 4 94 2.0 4.0 3.0 1.0 119 chr2R 11129832 intergenic not near genes chr2R 11129892 intergenic not near genes chr2R 11129951 intergenic not near genes chr2R_4_11125001 chr2R_11125001 RAL-370 851 chr2R 11161647 11161653 chr2R 11161805 11161813 4 160 6.0 2.5 4.2 0.8 166 chr2R 11161647 intron,intron CG13229 -,shn + chr2R 11161730 intron,intron CG13229 -,shn + chr2R 11161813 intron,intron CG13229 -,shn + chr2R_4_11160001 chr2R_11160001 RAL-370 852 chr2R 11179252 11179285 chr2R 11179358 11179391 9 101 0.0 9.0 4.5 1.6 139 chr2R 11179252 intron shn + chr2R 11179322 intron shn + chr2R 11179391 intron shn + chr2R_9_11175001 chr2R_11175001 RAL-370 853 chr2R 11207825 11207842 chr2R 11208007 11208037 BS 6 200 5.0 2.5 3.8 1.2 212 chr2R 11207825 intron shn + chr2R 11207931 intron shn + chr2R 11208037 intron shn + chr2R_6_11205001 chr2R_11205001 RAL-370 854 chr2R 11256263 11256298 chr2R 11256473 11256508 12 209 5.5 6.0 5.8 1.8 245 chr2R 11256263 intergenic CG13223 +,Cpr47Eb + chr2R 11256386 intergenic CG13223 +,Cpr47Eb + chr2R 11256508 5` UTR CG13223 + chr2R_12_11255001 chr2R_11255001 RAL-370 855 chr2R 11284269 11284318 chr2R 11284381 11284430 12 109 6.0 3.5 4.8 2.1 161 chr2R 11284269 intergenic CG13220 +,CG9062 - chr2R 11284350 5` UTR CG13220 + chr2R 11284430 5` UTR CG13220 + chr2R_12_11280001 chr2R_11280001 RAL-370 856 chr2R 11297620 11297635 chr2R 11301964 11301979 flea 9 4343 5.5 0.0 2.8 2.4 4359 chr2R 11297620 intergenic CG42336 - chr2R 11299800 intergenic not near genes chr2R 11301979 5` UTR CG7741 + chr2R_9_11295001 chr2R_11295001 RAL-370 857 chr2R 11344147 11344158 chr2R 11344261 11344274 5 115 0.0 3.0 1.5 2.0 127 chr2R 11344147 intergenic alphaTry - chr2R 11344210 intergenic alphaTry - chr2R 11344274 3` UTR alphaTry - chr2R_5_11340001 chr2R_11340001 RAL-370 858 chr2R 11368021 11368035 chr2R 11368117 11368129 5 95 2.5 5.0 3.8 1.0 108 chr2R 11368021 intron CG13204 + chr2R 11368075 intron CG13204 + chr2R 11368129 intron CG13204 + chr2R_5_11365001 chr2R_11365001 RAL-370 859 chr2R 11415504 11415550 chr2R 11418671 11418715 opus 11 3166 4.0 6.0 5.0 1.8 3211 chr2R 11415504 intron Drip - chr2R 11417110 intron Drip - chr2R 11418715 intron Drip - chr2R_11_11415001 chr2R_11415001 RAL-370 860 chr2R 11472627 11472680 chr2R 11473844 11473897 pogo 15 1216 6.0 5.5 5.8 2.2 1270 chr2R 11472627 intergenic not near genes chr2R 11473262 intergenic not near genes chr2R 11473897 intergenic not near genes chr2R_15_11470001 chr2R_11470001 RAL-370 861 chr2R 11567317 11567337 chr2R 11567414 11567432 4 96 0.5 0.0 0.2 3.3 115 chr2R 11567317 intergenic not near genes chr2R 11567374 intergenic not near genes chr2R 11567432 intergenic not near genes chr2R_4_11565001 chr2R_11565001 RAL-370 862 chr2R 11637309 11637337 chr2R 11637406 11637417 7 94 4.5 6.5 5.5 1.1 108 chr2R 11637309 intron CG9005 - chr2R 11637363 intron CG9005 - chr2R 11637417 intron CG9005 - chr2R_7_11635001 chr2R_11635001 RAL-370 863 chr2R 11641839 11641885 chr2R 11641945 11641999 13 112 2.0 2.5 2.2 4.1 160 chr2R 11641839 3` UTR CG9003 - chr2R 11641919 3` UTR CG9003 - chr2R 11641999 3` UTR CG9003 - chr2R_13_11640001 chr2R_11640001 RAL-370 864 chr2R 8518778 8518780 chr2R 12066156 12066180 5 3547383 15.5 13.0 14.2 0.3 3547402 chr2R 8518778 intron mtt - chr2R 10292479 intron CAP + chr2R 12066180 intron CG8888 - chr2R_5_10290001 chr2R_10290001 RAL-370 865 chr2R 12093934 12093980 chr2R 12094067 12094113 9 130 4.0 4.5 4.2 1.7 179 chr2R 12093934 intron jeb - chr2R 12094024 intron jeb - chr2R 12094113 intron jeb - chr2R_9_12090001 chr2R_12090001 RAL-370 866 chr2R 12185985 12186007 chr2R 12186100 12186122 7 115 5.0 5.0 5.0 1.2 137 chr2R 12185985 intron Cyp6g1 + chr2R 12186054 intron Cyp6g1 + chr2R 12186122 intron Cyp6g1 + chr2R_7_12185001 chr2R_12185001 RAL-370 867 chr2R 12186008 12186032 chr2R 12186099 12186128 12 109 1.5 4.5 3.0 3.0 120 chr2R 12186008 intron Cyp6g1 + chr2R 12186068 intron Cyp6g1 + chr2R 12186128 intron Cyp6g1 + chr2R_12_12185001 chr2R_12185001 RAL-370 868 chr2R 12185223 12185235 chr2R 12188136 12188143 4 2908 30.0 128.5 79.2 0.0 2920 chr2R 12185223 3` UTR,exon CG13175 +,CG33964 + chr2R 12186683 exon Cyp6g1 + chr2R 12188143 3` UTR Cyp6g1 + chr2R_4_12185001 chr2R_12185001 RAL-370 869 chr2R 12187475 12187483 chr2R 12190071 12190082 6 2598 48.0 57.5 52.8 0.1 2607 chr2R 12187475 exon Cyp6g1 + chr2R 12188778 exon Cyp6g2 - chr2R 12190082 exon Cyp6g2 - chr2R_6_12185001 chr2R_12185001 RAL-370 870 chr2R 12187471 12187506 chr2R 12190088 12190122 19 2615 68.5 49.5 59.0 0.3 2651 chr2R 12187471 exon Cyp6g1 + chr2R 12188796 exon Cyp6g2 - chr2R 12190122 exon Cyp6g2 - chr2R_19_12185001 chr2R_12185001 RAL-370 871 chr2R 12217569 12217587 chr2R 12217670 12217688 7 99 5.0 9.5 7.2 0.9 119 chr2R 12217569 intergenic not near genes chr2R 12217628 intergenic not near genes chr2R 12217688 intergenic not near genes chr2R_7_12215001 chr2R_12215001 RAL-370 872 chr2R 12217592 12217598 chr2R 12217656 12217699 4 91 1.5 6.5 4.0 0.8 107 chr2R 12217592 intergenic not near genes chr2R 12217646 intergenic not near genes chr2R 12217699 intergenic not near genes chr2R_4_12215001 chr2R_12215001 RAL-370 873 chr2R 12235602 12235622 chr2R 12235699 12235718 8 97 5.5 2.0 3.8 1.7 116 chr2R 12235602 intergenic not near genes chr2R 12235660 intergenic not near genes chr2R 12235718 intergenic not near genes chr2R_8_12235001 chr2R_12235001 RAL-370 874 chr2R 12245394 12245448 chr2R 12245494 12245533 5 97 2.0 0.5 1.2 2.3 139 chr2R 12245394 intergenic not near genes chr2R 12245464 intergenic not near genes chr2R 12245533 intergenic not near genes chr2R_5_12245001 chr2R_12245001 RAL-370 875 chr2R 12286342 12286389 chr2R 12286441 12286489 18 98 5.5 7.0 6.2 2.5 147 chr2R 12286342 intron CG42700 + chr2R 12286416 intron CG42700 + chr2R 12286489 intron CG42700 + chr2R_18_12285001 chr2R_12285001 RAL-370 876 chr2R 12479106 12479154 chr2R 12479214 12479214 7 99 4.0 1.5 2.8 1.8 108 chr2R 12479106 intron Dh44-R2 + chr2R 12479160 intron Dh44-R2 + chr2R 12479214 intron Dh44-R2 + chr2R_7_12475001 chr2R_12475001 RAL-370 877 chr2R 12501711 12501722 chr2R 12503855 12503903 Rt1c 4 2162 4.5 5.0 4.8 0.7 2192 chr2R 12501711 intron fdl - chr2R 12502807 intron fdl - chr2R 12503903 intron fdl - chr2R_4_12500001 chr2R_12500001 RAL-370 878 chr2R 12527274 12527302 chr2R 12527487 12527494 13 221 0.5 5.0 2.8 3.4 220 chr2R 12527274 intergenic not near genes chr2R 12527384 intergenic not near genes chr2R 12527494 intergenic not near genes chr2R_13_12525001 chr2R_12525001 RAL-370 879 chr2R 12565273 12565311 chr2R 12565378 12565416 7 103 5.0 0.0 2.5 2.0 143 chr2R 12565273 intergenic CG33775 - chr2R 12565344 intergenic CG33775 - chr2R 12565416 intergenic not near genes chr2R_7_12565001 chr2R_12565001 RAL-370 880 chr2R 12610704 12610744 chr2R 12610819 12610858 16 115 5.0 6.0 5.5 2.5 154 chr2R 12610704 exon Amph + chr2R 12610781 intron Amph + chr2R 12610858 intron Amph + chr2R_16_12610001 chr2R_12610001 RAL-370 881 chr2R 12789299 12789308 chr2R 12797663 12797680 roo 5 8372 2.5 1.5 2.0 1.7 8381 chr2R 12789299 intron,3` UTR sca +,CR45137 - chr2R 12793490 intron,intron sca +,CR45137 - chr2R 12797680 intron,3` UTR sca +,CR45137 - chr2R_5_12790001 chr2R_12790001 RAL-370 882 chr2R 12819442 12819474 chr2R 12824531 12824563 jockey 7 5082 3.0 5.0 4.0 1.4 5121 chr2R 12819442 intergenic not near genes chr2R 12822002 intergenic not near genes chr2R 12824563 intergenic not near genes chr2R_7_12820001 chr2R_12820001 RAL-370 883 chr2R 12879897 12880080 chr2R 12879997 12880179 8 101 0.0 0.0 0.0 8.0 282 chr2R 12879897 intron,intron Aats-asp +,Nmda1 - chr2R 12880038 intron,intron Aats-asp +,Nmda1 - chr2R 12880179 5` UTR,5` UTR Aats-asp +,Nmda1 - chr2R_8_12880001 chr2R_12880001 RAL-370 884 chr2R 13136828 13136837 chr2R 13141646 13141654 Doc 6 4816 9.5 3.5 6.5 0.8 4826 chr2R 13136828 exon Cap-G + chr2R 13139241 intron Cap-G + chr2R 13141654 intron Cap-G + chr2R_6_13135001 chr2R_13135001 RAL-370 885 chr2R 13136839 13136868 chr2R 13141639 13141685 Doc 5 4812 5.5 3.5 4.5 0.9 4846 chr2R 13136839 exon Cap-G + chr2R 13139262 intron Cap-G + chr2R 13141685 intron Cap-G + chr2R_5_13135001 chr2R_13135001 RAL-370 886 chr2R 13167416 13167444 chr2R 13167530 13167558 8 114 7.0 0.5 3.8 1.7 142 chr2R 13167416 intron GLaz - chr2R 13167487 intron GLaz - chr2R 13167558 intron GLaz - chr2R_8_13165001 chr2R_13165001 RAL-370 887 chr2R 13218284 13218323 chr2R 13218387 13218436 8 104 4.5 0.0 2.2 2.5 152 chr2R 13218284 intron CG4630 - chr2R 13218360 intron CG4630 - chr2R 13218436 intron CG4630 - chr2R_8_13215001 chr2R_13215001 RAL-370 888 chr2R 13302568 13302601 chr2R 13302666 13302699 12 97 4.5 4.0 4.2 2.3 131 chr2R 13302568 intergenic not near genes chr2R 13302634 intergenic not near genes chr2R 13302699 intergenic not near genes chr2R_12_13300001 chr2R_13300001 RAL-370 889 chr2R 13432916 13432969 chr2R 13433011 13433065 12 95 3.0 4.5 3.8 2.5 149 chr2R 13432916 intron CG42321 - chr2R 13432990 intron CG42321 - chr2R 13433065 intron,5` UTR CG42321 -,CG30065 + chr2R_12_13430001 chr2R_13430001 RAL-370 890 chr2R 13439099 13439137 chr2R 13439234 13439271 7 133 6.0 5.0 5.5 1.1 172 chr2R 13439099 intergenic CG42321 -,cnn - chr2R 13439185 intergenic cnn -,CG42321 - chr2R 13439271 intergenic cnn -,CG42321 - chr2R_7_13435001 chr2R_13435001 RAL-370 891 chr2R 13532501 13532544 chr2R 13532636 13532680 9 136 4.0 2.0 3.0 2.2 179 chr2R 13532501 intron Vmat - chr2R 13532590 intron Vmat - chr2R 13532680 intron Vmat - chr2R_9_13530001 chr2R_13530001 RAL-370 892 chr2R 13547061 13547105 chr2R 13547276 13547320 13 214 2.5 2.0 2.2 4.1 259 chr2R 13547061 intron CG6145 - chr2R 13547190 intron CG6145 - chr2R 13547320 intron CG6145 - chr2R_13_13545001 chr2R_13545001 RAL-370 893 chr2R 13557254 13557284 chr2R 13557360 13557390 6 102 3.5 3.5 3.5 1.3 136 chr2R 13557254 3` UTR link + chr2R 13557322 3` UTR link + chr2R 13557390 intergenic link +,snoRNA:Psi28S-1153 -,snoRNA:2R:9445205 - chr2R_6_13555001 chr2R_13555001 RAL-370 894 chr2R 13580484 13580517 chr2R 13580854 13580885 jockey 10 369 4.0 3.0 3.5 2.2 401 chr2R 13580484 3` UTR CG6191 - chr2R 13580684 3` UTR,3` UTR CG6191 -,CG45088 - chr2R 13580885 3` UTR,3` UTR CG6191 -,CG45088 - chr2R_10_13580001 chr2R_13580001 RAL-370 895 chr2R 13632302 13632313 chr2R 13632407 13632421 7 107 7.5 8.5 8.0 0.8 119 chr2R 13632302 intron fas + chr2R 13632362 intron fas + chr2R 13632421 intron fas + chr2R_7_13630001 chr2R_13630001 RAL-370 896 chr2R 13709834 13709853 chr2R 13709947 13709966 8 113 5.0 0.5 2.8 2.1 132 chr2R 13709834 intron fas + chr2R 13709900 intron fas + chr2R 13709966 intron fas + chr2R_8_13705001 chr2R_13705001 RAL-370 897 chr2R 13727838 13727842 chr2R 13727942 13727947 4 104 8.0 13.0 10.5 0.3 109 chr2R 13727838 intron fas + chr2R 13727892 intron fas + chr2R 13727947 intron fas + chr2R_4_13725001 chr2R_13725001 RAL-370 898 chr2R 13728112 13728156 chr2R 13735789 13735832 opus 14 7677 5.5 4.5 5.0 2.3 7720 chr2R 13728112 intron fas + chr2R 13731972 intron fas + chr2R 13735832 intron fas + chr2R_14_13730001 chr2R_13730001 RAL-370 899 chr2R 13752805 13752832 chr2R 13752923 13752950 10 116 4.5 7.0 5.8 1.5 145 chr2R 13752805 intergenic not near genes chr2R 13752878 intergenic not near genes chr2R 13752950 intergenic not near genes chr2R_10_13750001 chr2R_13750001 RAL-370 900 chr2R 13768960 13769010 chr2R 13769079 13769129 12 114 3.5 5.0 4.2 2.3 169 chr2R 13768960 intergenic not near genes chr2R 13769044 intergenic not near genes chr2R 13769129 intergenic not near genes chr2R_12_13765001 chr2R_13765001 RAL-370 901 chr2R 13817674 13817686 chr2R 13817775 13817788 5 102 4.5 2.0 3.2 1.2 114 chr2R 13817674 intron stj + chr2R 13817731 intron stj + chr2R 13817788 intron stj + chr2R_5_13815001 chr2R_13815001 RAL-370 902 chr2R 13905587 13905629 chr2R 13907589 13907631 Rt1a 4 2002 0.0 4.0 2.0 1.3 2044 chr2R 13905587 intron shot - chr2R 13906609 intron shot - chr2R 13907631 intron shot - chr2R_4_13905001 chr2R_13905001 RAL-370 903 chr2R 13915375 13915387 chr2R 13915471 13915483 7 95 3.5 6.0 4.8 1.2 108 chr2R 13915375 intron shot - chr2R 13915429 intron shot - chr2R 13915483 intron shot - chr2R_7_13915001 chr2R_13915001 RAL-370 904 chr2R 13925849 13925893 chr2R 13926023 13926067 12 174 6.0 1.5 3.8 2.5 218 chr2R 13925849 intron shot - chr2R 13925958 intron shot - chr2R 13926067 intron shot - chr2R_12_13925001 chr2R_13925001 RAL-370 905 chr2R 13986859 13986912 chr2R 13986968 13987021 15 108 1.5 3.5 2.5 4.3 162 chr2R 13986859 intron RN-tre - chr2R 13986940 intron RN-tre - chr2R 13987021 intron RN-tre - chr2R_15_13985001 chr2R_13985001 RAL-370 906 chr2R 14037242 14037288 chr2R 14037345 14037391 7 103 0.0 4.0 2.0 2.3 149 chr2R 14037242 intron mam + chr2R 14037316 intron mam + chr2R 14037391 intron mam + chr2R_7_14035001 chr2R_14035001 RAL-370 907 chr2R 14093413 14093424 chr2R 14109584 14109595 4 16171 8.0 1.0 4.5 0.7 16182 chr2R 14093413 intron Prosap - chr2R 14101504 intron Prosap - chr2R 14109595 intron Prosap - chr2R_4_14100001 chr2R_14100001 RAL-370 908 chr2R 14141934 14141948 chr2R 14142059 14142073 6 125 5.5 3.5 4.5 1.1 139 chr2R 14141934 intergenic not near genes chr2R 14142004 intergenic not near genes chr2R 14142073 intergenic not near genes chr2R_6_14140001 chr2R_14140001 RAL-370 909 chr2R 14168350 14168396 chr2R 14168459 14168505 6 109 1.0 3.5 2.2 1.9 155 chr2R 14168350 intergenic CG18327 +,CG18324 +,CR44368 - chr2R 14168428 intergenic CG18327 +,CG18324 +,CR44368 - chr2R 14168505 intergenic CG18327 +,CG18324 +,CR44368 - chr2R_6_14165001 chr2R_14165001 RAL-370 910 chr2R 14266844 14266873 chr2R 14266942 14266977 8 98 8.0 5.0 6.5 1.1 133 chr2R 14266844 intron CG8547 - chr2R 14266910 intron CG8547 - chr2R 14266977 intron CG8547 - chr2R_8_14265001 chr2R_14265001 RAL-370 911 chr2R 14277566 14277609 chr2R 14277665 14277700 16 99 4.5 7.0 5.8 2.4 134 chr2R 14277566 5` UTR Ih + chr2R 14277633 5` UTR Ih + chr2R 14277700 5` UTR Ih + chr2R_16_14275001 chr2R_14275001 RAL-370 912 chr2R 14285025 14285051 chr2R 14285142 14285168 11 117 3.5 8.0 5.8 1.6 143 chr2R 14285025 intron Ih + chr2R 14285096 intron Ih + chr2R 14285168 intron Ih + chr2R_11_14285001 chr2R_14285001 RAL-370 913 chr2R 14294810 14294861 chr2R 14294910 14294961 22 97 5.5 4.5 5.0 3.7 151 chr2R 14294810 intron Ih + chr2R 14294886 intron Ih + chr2R 14294961 intron Ih + chr2R_22_14290001 chr2R_14290001 RAL-370 914 chr2R 14393853 14393897 chr2R 14393951 14394001 10 98 9.5 3.0 6.2 1.4 148 chr2R 14393853 intergenic not near genes chr2R 14393927 intergenic not near genes chr2R 14394001 intergenic not near genes chr2R_10_14390001 chr2R_14390001 RAL-370 915 chr2R 14394208 14394226 chr2R 14399017 14399035 Doc 5 4809 8.5 4.5 6.5 0.7 4827 chr2R 14394208 intergenic not near genes chr2R 14396622 intergenic not near genes chr2R 14399035 intergenic not near genes chr2R_5_14395001 chr2R_14395001 RAL-370 916 chr2R 14467287 14467327 chr2R 14476465 14476505 roo 11 9172 1.5 3.0 2.2 3.4 9218 chr2R 14467287 intergenic not near genes chr2R 14471896 intergenic not near genes chr2R 14476505 5` UTR CR44462 + chr2R_11_14470001 chr2R_14470001 RAL-370 917 chr2R 14497372 14497410 chr2R 14498558 14498594 1360 13 1183 4.5 2.5 3.5 2.9 1222 chr2R 14497372 3` UTR Cpsf160 - chr2R 14497983 intron Cpsf160 - chr2R 14498594 3` UTR Cpsf160 - chr2R_13_14495001 chr2R_14495001 RAL-370 918 chr2R 14514470 14514493 chr2R 14514586 14514606 5 113 5.5 5.0 5.2 0.8 136 chr2R 14514470 intron,intron Cpr51A -,CG30197 + chr2R 14514538 intron,intron Cpr51A -,CG30197 + chr2R 14514606 intron,intron Cpr51A -,CG30197 + chr2R_5_14510001 chr2R_14510001 RAL-370 919 chr2R 14524830 14524868 chr2R 14524947 14524969 7 111 3.0 0.0 1.5 2.8 139 chr2R 14524830 intergenic not near genes chr2R 14524900 intergenic not near genes chr2R 14524969 intergenic not near genes chr2R_7_14520001 chr2R_14520001 RAL-370 920 chr2R 14530776 14530786 chr2R 14530846 14530885 5 93 3.5 6.0 4.8 0.9 109 chr2R 14530776 intron ttv + chr2R 14530830 intron ttv + chr2R 14530885 intron ttv + chr2R_5_14530001 chr2R_14530001 RAL-370 921 chr2R 14533758 14533780 chr2R 14533860 14533863 5 97 3.5 3.5 3.5 1.1 105 chr2R 14533758 intron ttv + chr2R 14533810 intron ttv + chr2R 14533863 intron ttv + chr2R_5_14530001 chr2R_14530001 RAL-370 922 chr2R 14653891 14653928 chr2R 14654002 14654048 11 116 4.0 5.0 4.5 2.0 157 chr2R 14653891 intergenic not near genes chr2R 14653970 intergenic not near genes chr2R 14654048 intergenic not near genes chr2R_11_14650001 chr2R_14650001 RAL-370 923 chr2R 14799870 14799897 chr2R 14799966 14799992 4 95 3.0 10.0 6.5 0.5 122 chr2R 14799870 intron kn - chr2R 14799931 intron kn - chr2R 14799992 intron kn - chr2R_4_14795001 chr2R_14795001 RAL-370 924 chr2R 14873670 14873720 chr2R 14875208 14875258 18 1535 5.5 0.0 2.8 4.7 1588 chr2R 14873670 intergenic Cyp6a22 +,Cyp6a17 + chr2R 14874464 exon Cyp6a17 + chr2R 14875258 exon Cyp6a17 + chr2R_18_14870001 chr2R_14870001 RAL-370 925 chr2R 14875238 14875264 chr2R 14875663 14875696 12 431 0.5 9.0 4.8 2.1 458 chr2R 14875238 exon Cyp6a17 + chr2R 14875467 exon Cyp6a17 + chr2R 14875696 3` UTR Cyp6a17 + chr2R_12_14875001 chr2R_14875001 RAL-370 926 chr2R 14889193 14889218 chr2R 14897821 14897844 Max-element 13 8627 10.0 0.0 5.0 2.2 8651 chr2R 14889193 intergenic Cyp6a8 - chr2R 14893518 intergenic not near genes chr2R 14897844 intergenic not near genes chr2R_13_14890001 chr2R_14890001 RAL-370 927 chr2R 14906467 14906515 chr2R 14906596 14906631 11 128 3.5 4.0 3.8 2.3 164 chr2R 14906467 intron CG10249 - chr2R 14906549 intron CG10249 - chr2R 14906631 intron CG10249 - chr2R_11_14905001 chr2R_14905001 RAL-370 928 chr2R 14911683 14911725 chr2R 14911826 14911867 13 142 3.0 4.0 3.5 2.9 184 chr2R 14911683 intron CG10249 - chr2R 14911775 intron CG10249 - chr2R 14911867 intron CG10249 - chr2R_13_14910001 chr2R_14910001 RAL-370 929 chr2R 14916544 14916574 chr2R 14916642 14916670 11 97 2.5 5.5 4.0 2.2 126 chr2R 14916544 intron CG10249 - chr2R 14916607 intron CG10249 - chr2R 14916670 intron CG10249 - chr2R_11_14915001 chr2R_14915001 RAL-370 930 chr2R 14922121 14922162 chr2R 14922217 14922253 7 95 11.0 3.0 7.0 0.9 132 chr2R 14922121 intron CG10249 - chr2R 14922187 intron CG10249 - chr2R 14922253 intron CG10249 - chr2R_7_14920001 chr2R_14920001 RAL-370 931 chr2R 14968452 14968470 chr2R 14968525 14968561 8 92 3.5 5.0 4.2 1.5 109 chr2R 14968452 intron ckn + chr2R 14968506 intron ckn + chr2R 14968561 intron ckn + chr2R_8_14965001 chr2R_14965001 RAL-370 932 chr2R 14998496 14998512 chr2R 14998656 14998672 6 160 3.0 4.0 3.5 1.3 176 chr2R 14998496 intergenic not near genes chr2R 14998584 intergenic not near genes chr2R 14998672 intergenic not near genes chr2R_6_14995001 chr2R_14995001 RAL-370 933 chr2R 15004717 15004750 chr2R 15005066 15005099 jockey 10 348 4.5 7.5 6.0 1.4 382 chr2R 15004717 intergenic not near genes chr2R 15004908 intergenic not near genes chr2R 15005099 intergenic not near genes chr2R_10_15000001 chr2R_15000001 RAL-370 934 chr2R 15015442 15015488 chr2R 15022884 15022932 mdg1 22 7440 3.0 3.0 3.0 5.5 7490 chr2R 15015442 intron hbs + chr2R 15019187 intron hbs + chr2R 15022932 intron hbs + chr2R_22_15015001 chr2R_15015001 RAL-370 935 chr2R 15084959 15085001 chr2R 15092028 15092069 297 9 7065 5.0 3.5 4.2 1.7 7110 chr2R 15084959 intergenic not near genes chr2R 15088514 intergenic not near genes chr2R 15092069 5` UTR CR44457 + chr2R_9_15085001 chr2R_15085001 RAL-370 936 chr2R 15119305 15119347 chr2R 15127804 15127846 Tirant 7 8496 3.0 4.5 3.8 1.5 8541 chr2R 15119305 intron chn + chr2R 15123576 intron chn + chr2R 15127846 intron chn + chr2R_7_15120001 chr2R_15120001 RAL-370 937 chr2R 15187861 15187916 chr2R 15187959 15188006 20 94 6.0 7.0 6.5 2.7 145 chr2R 15187861 intron igl + chr2R 15187934 intron igl + chr2R 15188006 intron igl + chr2R_20_15185001 chr2R_15185001 RAL-370 938 chr2R 15191629 15191671 chr2R 15191725 15191747 9 89 4.0 3.0 3.5 2.0 118 chr2R 15191629 intergenic not near genes chr2R 15191688 intergenic not near genes chr2R 15191747 intergenic not near genes chr2R_9_15190001 chr2R_15190001 RAL-370 939 chr2R 15235054 15235088 chr2R 15235188 15235222 5 134 2.5 5.0 3.8 1.0 168 chr2R 15235054 intron Fs - chr2R 15235138 intron Fs - chr2R 15235222 intron Fs - chr2R_5_15235001 chr2R_15235001 RAL-370 940 chr2R 15296144 15296168 chr2R 15296244 15296271 7 103 3.0 5.0 4.0 1.4 127 chr2R 15296144 intron Trpm - chr2R 15296208 intron Trpm - chr2R 15296271 intron Trpm - chr2R_7_15295001 chr2R_15295001 RAL-370 941 chr2R 15326603 15326653 chr2R 15326750 15326799 13 145 0.5 2.0 1.2 5.9 196 chr2R 15326603 intergenic CG8157 - chr2R 15326701 intergenic CG8157 -,CG8160 - chr2R 15326799 intergenic CG8160 -,CG8157 - chr2R_13_15325001 chr2R_15325001 RAL-370 942 chr2R 15374793 15375062 chr2R 15374896 15375192 4 116 5.5 3.0 4.2 0.8 399 chr2R 15374793 intergenic not near genes chr2R 15374992 intergenic not near genes chr2R 15375192 intergenic not near genes chr2R_4_15370001 chr2R_15370001 RAL-370 943 chr2R 15375342 15375362 chr2R 15376172 15376181 10 831 1.5 2.0 1.8 3.6 839 chr2R 15375342 intergenic not near genes chr2R 15375762 intergenic not near genes chr2R 15376181 intergenic dup - chr2R_10_15375001 chr2R_15375001 RAL-370 944 chr2R 15624835 15624880 chr2R 15624933 15624979 9 98 0.0 4.0 2.0 3.0 144 chr2R 15624835 intron CG42524 + chr2R 15624907 intron CG42524 + chr2R 15624979 intron CG42524 + chr2R_9_15620001 chr2R_15620001 RAL-370 945 chr2R 15690742 15690765 chr2R 15690872 15690883 5 131 2.0 6.0 4.0 1.0 141 chr2R 15690742 exon CG30090 + chr2R 15690812 exon CG30090 + chr2R 15690883 exon CG30090 + chr2R_5_15690001 chr2R_15690001 RAL-370 946 chr2R 15697874 15697914 chr2R 15697975 15698015 8 101 3.5 0.5 2.0 2.7 141 chr2R 15697874 exon CG33462 + chr2R 15697944 3` UTR CG33462 + chr2R 15698015 intergenic CG33462 + chr2R_8_15695001 chr2R_15695001 RAL-370 947 chr2R 15794871 15794889 chr2R 15794981 15794998 4 110 0.0 0.0 0.0 4.0 127 chr2R 15794871 intron,5` UTR Zasp52 -,tun + chr2R 15794934 intron,5` UTR Zasp52 -,tun + chr2R 15794998 intron,intron Zasp52 -,tun + chr2R_4_15790001 chr2R_15790001 RAL-370 948 chr2R 15833515 15833517 chr2R 15833611 15833624 4 104 9.5 5.5 7.5 0.5 109 chr2R 15833515 intron,intron tun +,Poxn - chr2R 15833570 intron,intron tun +,Poxn - chr2R 15833624 intron,intron tun +,Poxn - chr2R_4_15830001 chr2R_15830001 RAL-370 949 chr2R 15833521 15833554 chr2R 15833608 15833626 8 85 5.5 5.0 5.2 1.3 105 chr2R 15833521 intron,intron tun +,Poxn - chr2R 15833574 intron,intron tun +,Poxn - chr2R 15833626 intron,intron tun +,Poxn - chr2R_8_15830001 chr2R_15830001 RAL-370 950 chr2R 15845132 15845180 chr2R 15845231 15845279 5 99 0.0 3.0 1.5 2.0 147 chr2R 15845132 intron,intron tun +,CG8249 - chr2R 15845206 intron,intron tun +,CG8249 - chr2R 15845279 intron,intron tun +,CG8249 - chr2R_5_15845001 chr2R_15845001 RAL-370 951 chr2R 16119888 16119921 chr2R 16120013 16120033 17 135 4.5 3.0 3.8 3.5 145 chr2R 16119888 5` UTR Jhe + chr2R 16119960 intron Jhe + chr2R 16120033 intron Jhe + chr2R_17_16115001 chr2R_16115001 RAL-370 952 chr2R 16125769 16125814 chr2R 16126221 16126267 9 452 1.0 3.0 2.0 3.0 498 chr2R 16125769 exon spin + chr2R 16126018 intron spin + chr2R 16126267 intron spin + chr2R_9_16125001 chr2R_16125001 RAL-370 953 chr2R 16225859 16225887 chr2R 16225951 16225994 4 102 3.0 7.0 5.0 0.7 135 chr2R 16225859 intron CG15706 - chr2R 16225926 intron CG15706 - chr2R 16225994 intron CG15706 - chr2R_4_16225001 chr2R_16225001 RAL-370 954 chr2R 16236201 16236242 chr2R 16236295 16236308 6 90 3.5 3.0 3.2 1.4 107 chr2R 16236201 intergenic not near genes chr2R 16236254 intergenic CG3687 + chr2R 16236308 intergenic CG3687 + chr2R_6_16235001 chr2R_16235001 RAL-370 955 chr2R 16289586 16289611 chr2R 16289700 16289718 8 113 5.5 5.0 5.2 1.3 132 chr2R 16289586 intron,exon CR43730 -,JhI-26 + chr2R 16289652 intron,intron CR43730 -,JhI-26 + chr2R 16289718 intron,intron CR43730 -,JhI-26 + chr2R_8_16285001 chr2R_16285001 RAL-370 956 chr2R 16352826 16352860 chr2R 16352926 16352962 7 102 6.0 0.0 3.0 1.8 136 chr2R 16352826 intergenic not near genes chr2R 16352894 intergenic not near genes chr2R 16352962 intergenic not near genes chr2R_7_16350001 chr2R_16350001 RAL-370 957 chr2R 16359369 16359389 chr2R 16359445 16359491 6 94 4.5 3.0 3.8 1.2 122 chr2R 16359369 3` UTR CR45322 - chr2R 16359430 3` UTR CR45322 - chr2R 16359491 3` UTR CR45322 - chr2R_6_16355001 chr2R_16355001 RAL-370 958 chr2R 16544857 16544871 chr2R 16544962 16544976 4 105 0.0 4.0 2.0 1.3 119 chr2R 16544857 intergenic not near genes chr2R 16544916 intergenic not near genes chr2R 16544976 intergenic not near genes chr2R_4_16540001 chr2R_16540001 RAL-370 959 chr2R 16617059 16617067 chr2R 16617157 16617166 5 99 6.0 8.0 7.0 0.6 107 chr2R 16617059 intron CG5065 + chr2R 16617112 intron CG5065 + chr2R 16617166 intron CG5065 + chr2R_5_16615001 chr2R_16615001 RAL-370 960 chr2R 16617068 16617082 chr2R 16617149 16617181 4 94 5.5 7.5 6.5 0.5 113 chr2R 16617068 intron CG5065 + chr2R 16617124 intron CG5065 + chr2R 16617181 intron CG5065 + chr2R_4_16615001 chr2R_16615001 RAL-370 961 chr2R 16775629 16775672 chr2R 16775913 16775956 16 283 3.5 3.5 3.5 3.6 327 chr2R 16775629 3` UTR Arp53D + chr2R 16775792 intergenic Arp53D + chr2R 16775956 intergenic Arp53D + chr2R_16_16775001 chr2R_16775001 RAL-370 962 chr2R 16828477 16828495 chr2R 16828575 16828594 4 99 0.0 3.5 1.8 1.4 117 chr2R 16828477 intergenic not near genes chr2R 16828536 intergenic not near genes chr2R 16828594 intergenic CR43650 + chr2R_4_16825001 chr2R_16825001 RAL-370 963 chr2R 16917063 16917104 chr2R 16917167 16917208 14 99 5.0 5.0 5.0 2.3 145 chr2R 16917063 intergenic not near genes chr2R 16917136 intergenic not near genes chr2R 16917208 intergenic not near genes chr2R_14_16915001 chr2R_16915001 RAL-370 964 chr2R 16962689 16962730 chr2R 16963062 16963102 11 370 2.5 3.0 2.8 2.9 413 chr2R 16962689 intergenic not near genes chr2R 16962896 intergenic not near genes chr2R 16963102 intergenic not near genes chr2R_11_16960001 chr2R_16960001 RAL-370 965 chr2R 16972247 16972294 chr2R 16972432 16972479 12 184 0.5 6.0 3.2 2.9 232 chr2R 16972247 intergenic not near genes chr2R 16972363 intergenic not near genes chr2R 16972479 intergenic not near genes chr2R_12_16970001 chr2R_16970001 RAL-370 966 chr2R 16975185 16975223 chr2R 16975281 16975320 6 97 2.0 5.0 3.5 1.3 135 chr2R 16975185 intron Cbp53E + chr2R 16975252 intron Cbp53E + chr2R 16975320 intron Cbp53E + chr2R_6_16975001 chr2R_16975001 RAL-370 967 chr2R 17079033 17079088 chr2R 17079135 17079189 6 101 3.0 3.5 3.2 1.4 156 chr2R 17079033 intron CG30460 - chr2R 17079111 intron CG30460 - chr2R 17079189 intron CG30460 - chr2R_6_17075001 chr2R_17075001 RAL-370 968 chr2R 17120263 17120316 chr2R 17120381 17120432 12 114 1.5 2.0 1.8 4.3 169 chr2R 17120263 exon Amy-p - chr2R 17120348 intergenic Amy-p - chr2R 17120432 intergenic Amy-p - chr2R_12_17120001 chr2R_17120001 RAL-370 969 chr2R 17147225 17147267 chr2R 17152276 17152317 jockey 15 5051 5.0 9.0 7.0 1.9 5092 chr2R 17147225 intergenic not near genes chr2R 17149771 intergenic not near genes chr2R 17152317 intergenic not near genes chr2R_15_17145001 chr2R_17145001 RAL-370 970 chr2R 17183433 17183458 chr2R 17183531 17183571 5 104 3.5 0.0 1.8 1.8 138 chr2R 17183433 intergenic not near genes chr2R 17183502 intergenic not near genes chr2R 17183571 intergenic not near genes chr2R_5_17180001 chr2R_17180001 RAL-370 971 chr2R 17201084 17201095 chr2R 17201186 17201199 6 104 8.0 0.0 4.0 1.2 115 chr2R 17201084 intergenic not near genes chr2R 17201142 intergenic not near genes chr2R 17201199 intergenic not near genes chr2R_6_17200001 chr2R_17200001 RAL-370 972 chr2R 17233291 17233312 chr2R 17233399 17233403 11 113 3.5 3.0 3.2 2.6 112 chr2R 17233291 intron mbl + chr2R 17233347 intron mbl + chr2R 17233403 intron mbl + chr2R_11_17230001 chr2R_17230001 RAL-370 973 chr2R 17233314 17233320 chr2R 17233392 17233440 5 110 3.0 2.0 2.5 1.4 126 chr2R 17233314 intron mbl + chr2R 17233377 intron mbl + chr2R 17233440 intron mbl + chr2R_5_17230001 chr2R_17230001 RAL-370 974 chr2R 17236491 17236540 chr2R 17241715 17241751 copia 18 5223 6.0 5.0 5.5 2.8 5260 chr2R 17236491 intron mbl + chr2R 17239121 intron mbl + chr2R 17241751 intron mbl + chr2R_18_17235001 chr2R_17235001 RAL-370 975 chr2R 17299731 17299784 chr2R 17299956 17299992 4 211 1.5 3.0 2.2 1.2 261 chr2R 17299731 intron mbl + chr2R 17299862 intron mbl + chr2R 17299992 intron mbl + chr2R_4_17295001 chr2R_17295001 RAL-370 976 chr2R 17319109 17319132 chr2R 17319350 17319393 5 255 1.5 0.0 0.8 2.8 284 chr2R 17319109 intron mbl + chr2R 17319251 intron mbl + chr2R 17319393 intron mbl + chr2R_5_17315001 chr2R_17315001 RAL-370 977 chr2R 17397796 17397821 chr2R 17397905 17397932 7 107 2.0 1.5 1.8 2.5 136 chr2R 17397796 intron Sip1 + chr2R 17397864 intron Sip1 + chr2R 17397932 intron Sip1 + chr2R_7_17395001 chr2R_17395001 RAL-370 978 chr2R 17443754 17443800 chr2R 17443850 17443896 6 96 1.0 4.0 2.5 1.7 142 chr2R 17443754 intron EDTP - chr2R 17443825 intron EDTP - chr2R 17443896 intron EDTP - chr2R_6_17440001 chr2R_17440001 RAL-370 979 chr2R 17458985 17459028 chr2R 17459090 17459132 12 105 10.0 8.0 9.0 1.2 147 chr2R 17458985 intron CG14478 + chr2R 17459058 intron CG14478 + chr2R 17459132 intron CG14478 + chr2R_12_17455001 chr2R_17455001 RAL-370 980 chr2R 17470337 17470355 chr2R 17470441 17470459 5 103 0.0 2.0 1.0 2.5 122 chr2R 17470337 intron qkr54B + chr2R 17470398 intron qkr54B + chr2R 17470459 intron qkr54B + chr2R_5_17470001 chr2R_17470001 RAL-370 981 chr2R 17485899 17485945 chr2R 17490689 17490733 F-element 6 4789 4.0 4.0 4.0 1.2 4834 chr2R 17485899 5` UTR,intron CG43110 -,NT5E-2 + chr2R 17488316 intron NT5E-2 + chr2R 17490733 intron NT5E-2 + chr2R_6_17485001 chr2R_17485001 RAL-370 982 chr2R 17708382 17708405 chr2R 17708483 17708506 5 101 5.5 0.5 3.0 1.2 124 chr2R 17708382 intron CG6424 - chr2R 17708444 intron CG6424 - chr2R 17708506 intron CG6424 - chr2R_5_17705001 chr2R_17705001 RAL-370 983 chr2R 17709966 17710011 chr2R 17710077 17710120 7 109 2.5 3.0 2.8 1.8 154 chr2R 17709966 intron CG6424 - chr2R 17710043 intron CG6424 - chr2R 17710120 intron CG6424 - chr2R_7_17710001 chr2R_17710001 RAL-370 984 chr2R 17724822 17724873 chr2R 17724926 17724949 13 100 1.5 5.0 3.2 3.1 127 chr2R 17724822 exon CG10933 + chr2R 17724886 3` UTR CG10933 + chr2R 17724949 3` UTR CG10933 + chr2R_13_17720001 chr2R_17720001 RAL-370 985 chr2R 17784007 17784033 chr2R 17784266 17784292 pogo 7 259 6.5 1.0 3.8 1.5 285 chr2R 17784007 intergenic mir-31a - chr2R 17784150 intergenic mir-31a - chr2R 17784292 intergenic mir-31a - chr2R_7_17780001 chr2R_17780001 RAL-370 986 chr2R 17929127 17929150 chr2R 17929220 17929239 5 97 3.5 5.5 4.5 0.9 112 chr2R 17929127 intergenic not near genes chr2R 17929183 intergenic not near genes chr2R 17929239 intergenic not near genes chr2R_5_17925001 chr2R_17925001 RAL-370 987 chr2R 17971111 17971128 chr2R 17971210 17971227 4 98 4.0 7.0 5.5 0.6 116 chr2R 17971111 intergenic not near genes chr2R 17971169 intergenic not near genes chr2R 17971227 intergenic not near genes chr2R_4_17970001 chr2R_17970001 RAL-370 988 chr2R 17995128 17995169 chr2R 17995265 17995305 9 139 4.5 4.0 4.2 1.7 177 chr2R 17995128 intron dpr13 - chr2R 17995216 intron dpr13 - chr2R 17995305 intron dpr13 - chr2R_9_17995001 chr2R_17995001 RAL-370 989 chr2R 18021487 18021487 chr2R 18021971 18022036 4 497 0.0 4.0 2.0 1.3 549 chr2R 18021487 exon CG10910 + chr2R 18021762 exon CG10910 + chr2R 18022036 exon CG10910 + chr2R_4_18020001 chr2R_18020001 RAL-370 990 chr2R 18026681 18026712 chr2R 18026777 18026809 8 94 4.0 5.5 4.8 1.4 128 chr2R 18026681 intergenic not near genes chr2R 18026745 intergenic not near genes chr2R 18026809 intergenic not near genes chr2R_8_18025001 chr2R_18025001 RAL-370 991 chr2R 18035394 18035430 chr2R 18035490 18035495 16 88 5.0 4.0 4.5 2.9 101 chr2R 18035394 intergenic not near genes chr2R 18035444 intergenic not near genes chr2R 18035495 intergenic not near genes chr2R_16_18035001 chr2R_18035001 RAL-370 992 chr2R 18045283 18045326 chr2R 18045391 18045434 9 105 2.5 3.5 3.0 2.2 151 chr2R 18045283 intergenic CG5770 - chr2R 18045358 intergenic CG5770 - chr2R 18045434 intergenic CG5770 - chr2R_9_18045001 chr2R_18045001 RAL-370 993 chr2R 18045652 18045690 chr2R 18046024 18046062 jockey 7 372 3.5 2.0 2.8 1.8 410 chr2R 18045652 intergenic not near genes chr2R 18045857 intergenic not near genes chr2R 18046062 intergenic CG5767 - chr2R_7_18045001 chr2R_18045001 RAL-370 994 chr2R 18074583 18074618 chr2R 18074678 18074714 8 96 2.0 1.5 1.8 2.9 131 chr2R 18074583 intron CG34386 + chr2R 18074648 intron CG34386 + chr2R 18074714 intron CG34386 + chr2R_8_18070001 chr2R_18070001 RAL-370 995 chr2R 18111666 18111712 chr2R 18115554 18115600 F-element 6 3888 1.0 4.5 2.8 1.6 3934 chr2R 18111666 intergenic not near genes chr2R 18113633 intergenic not near genes chr2R 18115600 intergenic not near genes chr2R_6_18110001 chr2R_18110001 RAL-370 996 chr2R 18307557 18307603 chr2R 18307665 18307711 18 108 3.0 5.5 4.2 3.5 154 chr2R 18307557 intron sbb - chr2R 18307634 intron sbb - chr2R 18307711 intron sbb - chr2R_18_18305001 chr2R_18305001 RAL-370 997 chr2R 18358376 18358419 chr2R 18372608 18372609 roo 14 14228 4.5 5.0 4.8 2.4 14233 chr2R 18358376 intergenic not near genes chr2R 18365492 intergenic not near genes chr2R 18372609 intergenic not near genes chr2R_14_18365001 chr2R_18365001 RAL-370 998 chr2R 18396283 18396297 chr2R 18396439 18396443 7 157 2.0 7.0 4.5 1.3 160 chr2R 18396283 intergenic GstE10 - chr2R 18396363 intergenic GstE10 - chr2R 18396443 intergenic GstE10 - chr2R_7_18395001 chr2R_18395001 RAL-370 999 chr2R 18402481 18402534 chr2R 18402588 18402634 17 106 2.0 5.0 3.5 3.8 153 chr2R 18402481 intergenic not near genes chr2R 18402558 intergenic not near genes chr2R 18402634 intergenic not near genes chr2R_17_18400001 chr2R_18400001 RAL-370 1000 chr2R 18404783 18404824 chr2R 18404881 18404923 18 96 6.0 3.5 4.8 3.1 140 chr2R 18404783 exon GstE5 + chr2R 18404853 exon GstE5 + chr2R 18404923 exon GstE5 + chr2R_18_18400001 chr2R_18400001 RAL-370 1001 chr2R 18405732 18405787 chr2R 18405833 18405887 5 100 3.5 0.0 1.8 1.8 155 chr2R 18405732 intergenic GstE6 +,GstE5 + chr2R 18405810 intergenic GstE6 +,GstE5 + chr2R 18405887 intergenic GstE6 + chr2R_5_18405001 chr2R_18405001 RAL-370 1002 chr2R 18439023 18439060 chr2R 18439134 18439172 8 110 4.5 2.5 3.5 1.8 149 chr2R 18439023 intron CG30118 - chr2R 18439098 intron CG30118 - chr2R 18439172 intron CG30118 - chr2R_8_18435001 chr2R_18435001 RAL-370 1003 chr2R 18487825 18487852 chr2R 18495295 18495342 blood 5 7486 3.0 5.5 4.2 1.0 7517 chr2R 18487825 intron CG30116 - chr2R 18491584 intron CG30116 - chr2R 18495342 intron CG30116 - chr2R_5_18490001 chr2R_18490001 RAL-370 1004 chr2R 18528172 18528219 chr2R 18528277 18528324 12 95 4.5 1.5 3.0 3.0 152 chr2R 18528172 intron CG10924 + chr2R 18528248 intron CG10924 + chr2R 18528324 intron CG10924 + chr2R_12_18525001 chr2R_18525001 RAL-370 1005 chr2R 18574203 18574232 chr2R 18574988 18575017 7 782 7.5 7.0 7.2 0.9 814 chr2R 18574203 intron GEFmeso - chr2R 18574610 intron GEFmeso - chr2R 18575017 intron GEFmeso - chr2R_7_18570001 chr2R_18570001 RAL-370 1006 chr2R 18575143 18575154 chr2R 18575368 18575390 4 234 0.0 1.0 0.5 2.7 247 chr2R 18575143 intron GEFmeso - chr2R 18575266 intron GEFmeso - chr2R 18575390 intron GEFmeso - chr2R_4_18575001 chr2R_18575001 RAL-370 1007 chr2R 18575780 18575831 chr2R 18581988 18582039 3S18 17 6203 2.5 5.0 3.8 3.5 6259 chr2R 18575780 intron GEFmeso - chr2R 18578910 intron GEFmeso - chr2R 18582039 intron GEFmeso - chr2R_17_18575001 chr2R_18575001 RAL-370 1008 chr2R 18590854 18590896 chr2R 18600026 18600048 roo 6 9167 1.5 2.5 2.0 2.0 9194 chr2R 18590854 intron GEFmeso - chr2R 18595451 intron GEFmeso - chr2R 18600048 intron GEFmeso - chr2R_6_18595001 chr2R_18595001 RAL-370 1009 chr2R 18692880 18692903 chr2R 18692987 18693010 7 107 4.5 0.0 2.2 2.2 130 chr2R 18692880 intron Sik3 + chr2R 18692945 intron Sik3 + chr2R 18693010 intron Sik3 + chr2R_7_18690001 chr2R_18690001 RAL-370 1010 chr2R 18713219 18713269 chr2R 18713316 18713366 15 97 5.0 5.5 5.2 2.4 147 chr2R 18713219 intergenic not near genes chr2R 18713292 intergenic not near genes chr2R 18713366 intergenic not near genes chr2R_15_18710001 chr2R_18710001 RAL-370 1011 chr2R 18769634 18769734 chr2R 18769915 18769958 6 253 0.5 4.0 2.2 1.9 324 chr2R 18769634 intron Mctp + chr2R 18769796 intron Mctp + chr2R 18769958 intron Mctp + chr2R_6_18765001 chr2R_18765001 RAL-370 1012 chr2R 18808137 18808184 chr2R 18808232 18808280 18 94 2.0 0.0 1.0 9.0 143 chr2R 18808137 intergenic CG15096 - chr2R 18808208 intergenic CG15096 - chr2R 18808280 intergenic CG15096 - chr2R_18_18805001 chr2R_18805001 RAL-370 1013 chr2R 18827697 18827720 chr2R 18827796 18827820 4 100 5.5 7.0 6.2 0.6 123 chr2R 18827697 intron CG15097 - chr2R 18827758 intron CG15097 - chr2R 18827820 intron CG15097 - chr2R_4_18825001 chr2R_18825001 RAL-370 1014 chr2R 18862336 18862407 chr2R 18862473 18862512 4 121 0.0 0.0 0.0 4.0 176 chr2R 18862336 intergenic Jheh3 - chr2R 18862424 intergenic Jheh3 -,CG43069 + chr2R 18862512 intergenic CG43069 +,Jheh3 - chr2R_4_18860001 chr2R_18860001 RAL-370 1015 chr2R 18863296 18863337 chr2R 18863398 18863439 10 101 3.5 1.5 2.5 2.9 143 chr2R 18863296 intergenic CG43069 + chr2R 18863368 intergenic CG43069 + chr2R 18863439 intergenic CG43069 +,CG43070 + chr2R_10_18860001 chr2R_18860001 RAL-370 1016 chr2R 18871625 18871661 chr2R 18871730 18871766 16 105 9.0 3.5 6.2 2.2 141 chr2R 18871625 intergenic not near genes chr2R 18871696 intergenic not near genes chr2R 18871766 intergenic not near genes chr2R_16_18870001 chr2R_18870001 RAL-370 1017 chr2R 18953140 18953190 chr2R 18953246 18953283 10 101 3.0 2.0 2.5 2.9 143 chr2R 18953140 intron sano + chr2R 18953212 intron sano + chr2R 18953283 intron sano + chr2R_10_18950001 chr2R_18950001 RAL-370 1018 chr2R 18995513 18995562 chr2R 18995612 18995633 13 96 5.5 5.5 5.5 2.0 120 chr2R 18995513 intron tn + chr2R 18995573 intron tn + chr2R 18995633 intron tn + chr2R_13_18995001 chr2R_18995001 RAL-370 1019 chr2R 19010757 19010774 chr2R 19010863 19010911 7 118 3.0 5.0 4.0 1.4 154 chr2R 19010757 intergenic not near genes chr2R 19010834 intergenic not near genes chr2R 19010911 intergenic not near genes chr2R_7_19010001 chr2R_19010001 RAL-370 1020 chr2R 19012923 19012944 chr2R 19013037 19013058 9 112 10.5 8.0 9.2 0.9 135 chr2R 19012923 intergenic not near genes chr2R 19012990 intergenic not near genes chr2R 19013058 intergenic not near genes chr2R_9_19010001 chr2R_19010001 RAL-370 1021 chr2R 19012945 19012968 chr2R 19013032 19013065 8 103 8.0 6.5 7.2 1.0 120 chr2R 19012945 intergenic not near genes chr2R 19013005 intergenic not near genes chr2R 19013065 intergenic not near genes chr2R_8_19010001 chr2R_19010001 RAL-370 1022 chr2R 19026031 19026057 chr2R 19026188 19026217 9 160 5.0 2.5 3.8 1.9 186 chr2R 19026031 intron 5-HT1B - chr2R 19026124 intron 5-HT1B - chr2R 19026217 intron 5-HT1B - chr2R_9_19025001 chr2R_19025001 RAL-370 1023 chr2R 19067709 19067755 chr2R 19067805 19067845 12 95 0.0 2.0 1.0 6.0 136 chr2R 19067709 intron 5-HT1A + chr2R 19067777 intron 5-HT1A + chr2R 19067845 intron 5-HT1A + chr2R_12_19065001 chr2R_19065001 RAL-370 1024 chr2R 19203323 19203340 chr2R 19203724 19203737 6 400 14.5 12.5 13.5 0.4 414 chr2R 19203323 intron hppy + chr2R 19203530 intron hppy + chr2R 19203737 intron hppy + chr2R_6_19200001 chr2R_19200001 RAL-370 1025 chr2R 19300941 19300991 chr2R 19301043 19301093 17 102 3.5 2.5 3.0 4.2 152 chr2R 19300941 intron Tab2 + chr2R 19301017 intron Tab2 + chr2R 19301093 intron Tab2 + chr2R_17_19300001 chr2R_19300001 RAL-370 1026 chr2R 19372887 19372920 chr2R 19373189 19373195 5 293 5.5 1.5 3.5 1.1 308 chr2R 19372887 intron CG9416 - chr2R 19373041 intron CG9416 - chr2R 19373195 intron CG9416 - chr2R_5_19370001 chr2R_19370001 RAL-370 1027 chr2R 19588731 19588776 chr2R 19588829 19588874 14 98 1.5 3.0 2.2 4.4 143 chr2R 19588731 intron sm - chr2R 19588802 intron sm - chr2R 19588874 intron sm - chr2R_14_19585001 chr2R_19585001 RAL-370 1028 chr2R 19715838 19715857 chr2R 19723327 19723331 blood 7 7486 15.5 6.0 10.8 0.6 7493 chr2R 19715838 intergenic not near genes chr2R 19719584 intergenic not near genes chr2R 19723331 intergenic not near genes chr2R_7_19715001 chr2R_19715001 RAL-370 1029 chr2R 19773995 19774039 chr2R 19774128 19774172 9 133 3.5 4.5 4.0 1.8 177 chr2R 19773995 intergenic not near genes chr2R 19774084 intergenic not near genes chr2R 19774172 intergenic not near genes chr2R_9_19770001 chr2R_19770001 RAL-370 1030 chr2R 19776591 19776620 chr2R 19779923 19779957 jockey 9 3337 5.5 6.0 5.8 1.3 3366 chr2R 19776591 intergenic not near genes chr2R 19778274 intergenic not near genes chr2R 19779957 intergenic not near genes chr2R_9_19775001 chr2R_19775001 RAL-370 1031 chr2R 19794885 19794901 chr2R 19794976 19795021 4 110 3.5 5.0 4.2 0.8 136 chr2R 19794885 intergenic not near genes chr2R 19794953 intergenic not near genes chr2R 19795021 intergenic not near genes chr2R_4_19790001 chr2R_19790001 RAL-370 1032 chr2R 19807657 19807702 chr2R 19807759 19807803 5 102 2.5 6.0 4.2 1.0 146 chr2R 19807657 intergenic not near genes chr2R 19807730 intergenic not near genes chr2R 19807803 intergenic not near genes chr2R_5_19805001 chr2R_19805001 RAL-370 1033 chr2R 19836899 19836951 chr2R 19837019 19837030 14 116 3.5 6.0 4.8 2.4 131 chr2R 19836899 intergenic not near genes chr2R 19836964 intergenic not near genes chr2R 19837030 intergenic not near genes chr2R_14_19835001 chr2R_19835001 RAL-370 1034 chr2R 19914832 19914878 chr2R 19922264 19922310 mdg1 5 7432 8.5 4.5 6.5 0.7 7478 chr2R 19914832 intergenic not near genes chr2R 19918571 intergenic not near genes chr2R 19922310 intergenic not near genes chr2R_5_19915001 chr2R_19915001 RAL-370 1035 chr2R 19943253 19943280 chr2R 19943381 19943410 11 130 1.0 4.0 2.5 3.1 157 chr2R 19943253 intergenic not near genes chr2R 19943332 intergenic not near genes chr2R 19943410 intergenic not near genes chr2R_11_19940001 chr2R_19940001 RAL-370 1036 chr2R 19957451 19957461 chr2R 19962647 19962683 copia 5 5216 2.5 7.5 5.0 0.8 5232 chr2R 19957451 intergenic CG44623 + chr2R 19960067 intergenic not near genes chr2R 19962683 intergenic not near genes chr2R_5_19960001 chr2R_19960001 RAL-370 1037 chr2R 20012150 20012188 chr2R 20012374 20012414 12 225 7.5 6.0 6.8 1.5 264 chr2R 20012150 intergenic not near genes chr2R 20012282 intergenic not near genes chr2R 20012414 intergenic not near genes chr2R_12_20010001 chr2R_20010001 RAL-370 1038 chr2R 20069215 20069248 chr2R 20071874 20071908 opus 4 2660 0.0 1.0 0.5 2.7 2693 chr2R 20069215 intergenic not near genes chr2R 20070562 intergenic not near genes chr2R 20071908 intergenic not near genes chr2R_4_20070001 chr2R_20070001 RAL-370 1039 chr2R 20320702 20320737 chr2R 20320798 20320832 8 94 2.5 6.0 4.2 1.5 130 chr2R 20320702 intron CG8920 + chr2R 20320767 intron CG8920 + chr2R 20320832 intron CG8920 + chr2R_8_20320001 chr2R_20320001 RAL-370 1040 chr2R 20326740 20326789 chr2R 20326836 20326878 19 90 5.0 4.0 4.5 3.5 138 chr2R 20326740 5` UTR MED8 - chr2R 20326809 intergenic MED8 -,CG8929 + chr2R 20326878 intergenic MED8 -,CG8929 + chr2R_19_20325001 chr2R_20325001 RAL-370 1041 chr2R 20382319 20382354 chr2R 20382421 20382438 8 94 5.5 4.0 4.8 1.4 119 chr2R 20382319 intergenic not near genes chr2R 20382378 intergenic not near genes chr2R 20382438 intergenic not near genes chr2R_8_20380001 chr2R_20380001 RAL-370 1042 chr2R 20405913 20405960 chr2R 20406037 20406052 8 110 4.5 2.0 3.2 1.9 139 chr2R 20405913 intergenic not near genes chr2R 20405982 intergenic not near genes chr2R 20406052 intergenic not near genes chr2R_8_20405001 chr2R_20405001 RAL-370 1043 chr2R 20430688 20430736 chr2R 20430793 20430844 16 103 2.5 4.0 3.2 3.8 156 chr2R 20430688 intron CG12484 + chr2R 20430766 intron CG12484 + chr2R 20430844 intron CG12484 + chr2R_16_20430001 chr2R_20430001 RAL-370 1044 chr2R 20541976 20542017 chr2R 20542067 20542115 8 97 4.5 1.5 3.0 2.0 139 chr2R 20541976 intergenic not near genes chr2R 20542046 intergenic not near genes chr2R 20542115 intergenic not near genes chr2R_8_20540001 chr2R_20540001 RAL-370 1045 chr2R 20545631 20545669 chr2R 20545780 20545807 5 147 0.5 3.0 1.8 1.8 176 chr2R 20545631 intergenic not near genes chr2R 20545719 intergenic not near genes chr2R 20545807 intergenic not near genes chr2R_5_20545001 chr2R_20545001 RAL-370 1046 chr2R 20555323 20555336 chr2R 20555435 20555448 7 112 3.5 3.0 3.2 1.7 125 chr2R 20555323 intergenic not near genes chr2R 20555386 intergenic not near genes chr2R 20555448 intergenic not near genes chr2R_7_20555001 chr2R_20555001 RAL-370 1047 chr2R 20578632 20578649 chr2R 20578739 20578754 7 107 2.0 4.0 3.0 1.8 122 chr2R 20578632 intron qsm - chr2R 20578693 intron qsm - chr2R 20578754 intron qsm - chr2R_7_20575001 chr2R_20575001 RAL-370 1048 chr2R 20592568 20592599 chr2R 20592666 20592697 12 96 4.0 3.0 3.5 2.7 129 chr2R 20592568 intron bl + chr2R 20592632 intron bl + chr2R 20592697 intron bl + chr2R_12_20590001 chr2R_20590001 RAL-370 1049 chr2R 20684093 20684121 chr2R 20684181 20684226 4 100 1.0 3.0 2.0 1.3 133 chr2R 20684093 intergenic not near genes chr2R 20684160 intergenic not near genes chr2R 20684226 intergenic not near genes chr2R_4_20680001 chr2R_20680001 RAL-370 1050 chr2R 20707352 20707401 chr2R 20707541 20707570 5 173 4.0 5.5 4.8 0.9 218 chr2R 20707352 intron dpr + chr2R 20707461 intron dpr + chr2R 20707570 intron dpr + chr2R_5_20705001 chr2R_20705001 RAL-370 1051 chr2R 20739425 20739474 chr2R 20744213 20744262 F-element 14 4786 7.0 3.5 5.2 2.3 4837 chr2R 20739425 intron dpr + chr2R 20741844 intron dpr + chr2R 20744262 intron dpr + chr2R_14_20740001 chr2R_20740001 RAL-370 1052 chr2R 20783294 20783332 chr2R 20788086 20788124 F-element 6 4792 3.0 6.0 4.5 1.1 4830 chr2R 20783294 intergenic not near genes chr2R 20785709 intergenic not near genes chr2R 20788124 intergenic CG43666 - chr2R_6_20785001 chr2R_20785001 RAL-370 1053 chr2R 20830522 20830570 chr2R 20830622 20830670 13 99 6.5 4.0 5.2 2.1 148 chr2R 20830522 intron,intron insc -,sktl - chr2R 20830596 intron,intron insc -,sktl - chr2R 20830670 intron,intron insc -,sktl - chr2R_13_20830001 chr2R_20830001 RAL-370 1054 chr2R 20863098 20863139 chr2R 20863203 20863214 11 103 4.0 5.5 4.8 1.9 116 chr2R 20863098 intergenic not near genes chr2R 20863156 intergenic not near genes chr2R 20863214 intergenic not near genes chr2R_11_20860001 chr2R_20860001 RAL-370 1055 chr2R 20962454 20962491 chr2R 20962545 20962584 9 93 6.0 4.0 5.0 1.5 130 chr2R 20962454 intergenic not near genes chr2R 20962519 intergenic not near genes chr2R 20962584 intergenic not near genes chr2R_9_20960001 chr2R_20960001 RAL-370 1056 chr2R 20962887 20962938 chr2R 20963005 20963056 23 118 3.5 3.0 3.2 5.5 169 chr2R 20962887 intergenic not near genes chr2R 20962972 intergenic not near genes chr2R 20963056 intergenic not near genes chr2R_23_20960001 chr2R_20960001 RAL-370 1057 chr2R 20967008 20967047 chr2R 20967102 20967144 5 95 8.0 1.5 4.8 0.9 136 chr2R 20967008 intergenic not near genes chr2R 20967076 intergenic not near genes chr2R 20967144 intergenic not near genes chr2R_5_20965001 chr2R_20965001 RAL-370 1058 chr2R 21075663 21075681 chr2R 21075769 21075786 11 105 7.5 5.5 6.5 1.5 123 chr2R 21075663 intron Treh + chr2R 21075724 intron Treh + chr2R 21075786 intron Treh + chr2R_11_21075001 chr2R_21075001 RAL-370 1059 chr2R 21103528 21103541 chr2R 21103625 21103640 7 97 6.5 0.0 3.2 1.7 112 chr2R 21103528 intron ktub + chr2R 21103584 intron ktub + chr2R 21103640 intron ktub + chr2R_7_21100001 chr2R_21100001 RAL-370 1060 chr2R 21103852 21103911 chr2R 21103962 21104013 7 111 0.0 3.5 1.8 2.5 161 chr2R 21103852 intron ktub + chr2R 21103932 intron ktub + chr2R 21104013 intron ktub + chr2R_7_21100001 chr2R_21100001 RAL-370 1061 chr2R 21113460 21113486 chr2R 21113569 21113593 8 108 9.0 4.0 6.5 1.1 133 chr2R 21113460 intron ktub + chr2R 21113526 intron ktub + chr2R 21113593 intron ktub + chr2R_8_21110001 chr2R_21110001 RAL-370 1062 chr2R 21136880 21136940 chr2R 21136984 21137038 10 103 0.0 0.5 0.2 8.3 158 chr2R 21136880 intron Magi - chr2R 21136959 intron Magi - chr2R 21137038 intron Magi - chr2R_10_21135001 chr2R_21135001 RAL-370 1063 chr2R 21151102 21151146 chr2R 21153754 21153799 opus 14 2650 6.0 2.5 4.2 2.7 2697 chr2R 21151102 intron CG30389 - chr2R 21152450 intron CG30389 - chr2R 21153799 intron CG30389 - chr2R_14_21150001 chr2R_21150001 RAL-370 1064 chr2R 21188208 21188250 chr2R 21188298 21188349 12 98 3.0 3.5 3.2 2.9 141 chr2R 21188208 exon tud + chr2R 21188278 intron tud + chr2R 21188349 intron tud + chr2R_12_21185001 chr2R_21185001 RAL-370 1065 chr2R 21232626 21232637 chr2R 21232816 21232827 4 190 6.5 0.0 3.2 1.0 201 chr2R 21232626 intron ASPP - chr2R 21232726 intron ASPP - chr2R 21232827 intron ASPP - chr2R_4_21230001 chr2R_21230001 RAL-370 1066 chr2R 21285414 21285436 chr2R 21285511 21285533 4 96 4.5 5.0 4.8 0.7 119 chr2R 21285414 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285474 3` UTR,3` UTR MFS16 +,CG10505 - chr2R 21285533 3` UTR,3` UTR MFS16 +,CG10505 - chr2R_4_21285001 chr2R_21285001 RAL-370 1067 chr2R 21491270 21491297 chr2R 21491368 21491395 7 98 3.0 5.0 4.0 1.4 125 chr2R 21491270 intron Fkbp14 - chr2R 21491332 intron Fkbp14 - chr2R 21491395 intron Fkbp14 - chr2R_7_21490001 chr2R_21490001 RAL-370 1068 chr2R 21546021 21546061 chr2R 21546120 21546159 19 98 3.5 7.0 5.2 3.1 138 chr2R 21546021 intron Egfr + chr2R 21546090 intron Egfr + chr2R 21546159 intron Egfr + chr2R_19_21545001 chr2R_21545001 RAL-370 1069 chr2R 21578742 21578760 chr2R 21578847 21578865 6 105 0.0 3.5 1.8 2.1 123 chr2R 21578742 intergenic not near genes chr2R 21578804 intergenic not near genes chr2R 21578865 intergenic not near genes chr2R_6_21575001 chr2R_21575001 RAL-370 1070 chr2R 21647972 21648013 chr2R 21648093 21648121 14 118 4.0 4.5 4.2 2.7 149 chr2R 21647972 intron CG10082 + chr2R 21648046 intron CG10082 + chr2R 21648121 intron CG10082 + chr2R_14_21645001 chr2R_21645001 RAL-370 1071 chr2R 21700160 21700185 chr2R 21700249 21700291 7 100 3.0 5.0 4.0 1.4 131 chr2R 21700160 intron HmgZ - chr2R 21700226 intron HmgZ - chr2R 21700291 intron HmgZ - chr2R_7_21700001 chr2R_21700001 RAL-370 1072 chr2R 21721561 21721611 chr2R 21721669 21721706 16 106 1.0 3.0 2.0 5.3 145 chr2R 21721561 intron LBR + chr2R 21721634 intron LBR + chr2R 21721706 intron LBR + chr2R_16_21720001 chr2R_21720001 RAL-370 1073 chr2R 21736267 21736308 chr2R 21736368 21736382 16 99 3.5 3.0 3.2 3.8 115 chr2R 21736267 intergenic not near genes chr2R 21736324 intergenic not near genes chr2R 21736382 intergenic not near genes chr2R_16_21735001 chr2R_21735001 RAL-370 1074 chr2R 21738263 21738307 chr2R 21747442 21747478 roo 5 9168 0.5 3.0 1.8 1.8 9215 chr2R 21738263 intergenic not near genes chr2R 21742870 intergenic not near genes chr2R 21747478 intergenic not near genes chr2R_5_21740001 chr2R_21740001 RAL-370 1075 chr2R 21753064 21753111 chr2R 21753569 21753614 roo 27 502 3.0 5.0 4.0 5.4 550 chr2R 21753064 intergenic not near genes chr2R 21753339 intergenic not near genes chr2R 21753614 intergenic not near genes chr2R_27_21750001 chr2R_21750001 RAL-370 1076 chr2R 21809503 21809513 chr2R 21817763 21817773 roo 6 8260 5.0 7.5 6.2 0.8 8270 chr2R 21809503 intergenic not near genes chr2R 21813638 intergenic not near genes chr2R 21817773 intergenic not near genes chr2R_6_21810001 chr2R_21810001 RAL-370 1077 chr2R 21830201 21830236 chr2R 21830300 21830335 5 99 2.0 4.5 3.2 1.2 134 chr2R 21830201 intron CG13492 - chr2R 21830268 intron CG13492 - chr2R 21830335 intron CG13492 - chr2R_5_21830001 chr2R_21830001 RAL-370 1078 chr2R 21888298 21888322 chr2R 21888406 21888439 14 116 3.0 4.5 3.8 2.9 141 chr2R 21888298 intron Fili + chr2R 21888368 intron Fili + chr2R 21888439 intron Fili + chr2R_14_21885001 chr2R_21885001 RAL-370 1079 chr2R 21963177 21963204 chr2R 21963282 21963309 10 103 5.5 5.5 5.5 1.5 132 chr2R 21963177 intergenic not near genes chr2R 21963243 intergenic not near genes chr2R 21963309 intergenic not near genes chr2R_10_21960001 chr2R_21960001 RAL-370 1080 chr2R 22006637 22006666 chr2R 22006714 22006762 15 86 4.0 1.5 2.8 3.9 125 chr2R 22006637 intron CG34370 - chr2R 22006700 intron CG34370 - chr2R 22006762 intron CG34370 - chr2R_15_22005001 chr2R_22005001 RAL-370 1081 chr2R 22018447 22018485 chr2R 22018700 22018737 8 252 7.0 2.5 4.8 1.4 290 chr2R 22018447 intron CG34370 - chr2R 22018592 intron CG34370 - chr2R 22018737 intron CG34370 - chr2R_8_22015001 chr2R_22015001 RAL-370 1082 chr2R 22029465 22029506 chr2R 22029622 22029664 8 154 1.5 5.0 3.2 1.9 199 chr2R 22029465 intron CG34370 - chr2R 22029564 intron CG34370 - chr2R 22029664 intron CG34370 - chr2R_8_22025001 chr2R_22025001 RAL-370 1083 chr2R 22035525 22035575 chr2R 22035632 22035682 17 103 3.0 7.5 5.2 2.7 157 chr2R 22035525 intron,exon CG34370 -,CG9308 + chr2R 22035604 intron,3` UTR CG34370 -,CG9308 + chr2R 22035682 intron CG34370 - chr2R_17_22035001 chr2R_22035001 RAL-370 1084 chr2R 22072680 22072703 chr2R 22072783 22072808 9 105 6.0 4.0 5.0 1.5 128 chr2R 22072680 intron CG11474 - chr2R 22072744 intron CG11474 - chr2R 22072808 exon CG11474 - chr2R_9_22070001 chr2R_22070001 RAL-370 1085 chr2R 22179225 22179231 chr2R 22179343 22179356 4 124 0.5 5.5 3.0 1.0 131 chr2R 22179225 intron CG11170 - chr2R 22179290 intron CG11170 - chr2R 22179356 intron CG11170 - chr2R_4_22175001 chr2R_22175001 RAL-370 1086 chr2R 22185683 22185695 chr2R 22185801 22185810 4 117 1.0 0.5 0.8 2.2 127 chr2R 22185683 3` UTR MED16 + chr2R 22185746 3` UTR MED16 + chr2R 22185810 3` UTR MED16 + chr2R_4_22185001 chr2R_22185001 RAL-370 1087 chr2R 22297705 22297726 chr2R 22297800 22297822 6 96 0.0 3.0 1.5 2.4 117 chr2R 22297705 intergenic not near genes chr2R 22297764 intergenic wdp - chr2R 22297822 intergenic wdp - chr2R_6_22295001 chr2R_22295001 RAL-370 1088 chr2R 22349678 22349717 chr2R 22351482 22351512 jockey 11 1798 5.5 4.0 4.8 1.9 1834 chr2R 22349678 intron Liprin-gamma - chr2R 22350595 intron Liprin-gamma - chr2R 22351512 intron Liprin-gamma - chr2R_11_22350001 chr2R_22350001 RAL-370 1089 chr2R 22360367 22360403 chr2R 22360819 22360827 jockey 6 448 5.0 4.0 4.5 1.1 460 chr2R 22360367 intron Liprin-gamma - chr2R 22360597 intron Liprin-gamma - chr2R 22360827 intron Liprin-gamma - chr2R_6_22360001 chr2R_22360001 RAL-370 1090 chr2R 22362645 22362686 chr2R 22362742 22362784 10 98 2.5 3.5 3.0 2.5 139 chr2R 22362645 intron Liprin-gamma - chr2R 22362714 intron Liprin-gamma - chr2R 22362784 intron Liprin-gamma - chr2R_10_22360001 chr2R_22360001 RAL-370 1091 chr2R 22411476 22411528 chr2R 22411574 22411626 9 96 2.5 4.5 3.5 2.0 150 chr2R 22411476 5` UTR qkr58E-3 - chr2R 22411551 intergenic qkr58E-3 -,Mes4 + chr2R 22411626 intergenic qkr58E-3 -,Mes4 + chr2R_9_22410001 chr2R_22410001 RAL-370 1092 chr2R 22505484 22505509 chr2R 22505694 22505700 5 206 2.0 2.0 2.0 1.7 216 chr2R 22505484 intron px - chr2R 22505592 intron px - chr2R 22505700 intron px - chr2R_5_22505001 chr2R_22505001 RAL-370 1093 chr2R 22525731 22525768 chr2R 22529306 22529343 jockey 9 3572 6.5 3.0 4.8 1.6 3612 chr2R 22525731 intron px - chr2R 22527537 intron px - chr2R 22529343 intron px - chr2R_9_22525001 chr2R_22525001 RAL-370 1094 chr2R 22525769 22525787 chr2R 22529300 22529312 jockey 7 3557 5.0 1.5 3.2 1.7 3543 chr2R 22525769 intron px - chr2R 22527540 intron px - chr2R 22529312 intron px - chr2R_7_22525001 chr2R_22525001 RAL-370 1095 chr2R 22541844 22541882 chr2R 22541960 22542002 9 117 5.5 4.5 5.0 1.5 158 chr2R 22541844 intron px - chr2R 22541923 intron px - chr2R 22542002 intron px - chr2R_9_22540001 chr2R_22540001 RAL-370 1096 chr2R 22654349 22654401 chr2R 22654450 22654502 10 100 2.0 3.5 2.8 2.6 153 chr2R 22654349 exon Cyp6d2 - chr2R 22654426 5` UTR Cyp6d2 - chr2R 22654502 5` UTR Cyp6d2 - chr2R_10_22650001 chr2R_22650001 RAL-370 1097 chr2R 22756532 22756582 chr2R 22756628 22756679 11 96 3.5 7.0 5.2 1.8 147 chr2R 22756532 intron,intron CG42260 -,CR30267 + chr2R 22756606 intron,intron CG42260 -,CR30267 + chr2R 22756679 intron,intron CG42260 -,CR30267 + chr2R_11_22755001 chr2R_22755001 RAL-370 1098 chr2R 22774953 22774999 chr2R 22775392 22775435 jockey 17 438 5.5 6.5 6.0 2.4 482 chr2R 22774953 intron CG42260 - chr2R 22775194 intron CG42260 - chr2R 22775435 intron CG42260 - chr2R_17_22775001 chr2R_22775001 RAL-370 1099 chr2R 22781950 22781984 chr2R 22782156 22782166 5 202 2.5 1.0 1.8 1.8 216 chr2R 22781950 intron CG42260 - chr2R 22782058 intron CG42260 - chr2R 22782166 intron CG42260 - chr2R_5_22780001 chr2R_22780001 RAL-370 1100 chr2R 22785713 22785759 chr2R 22785811 22785853 6 97 3.5 3.5 3.5 1.3 140 chr2R 22785713 intron CG42260 - chr2R 22785783 intron CG42260 - chr2R 22785853 intron CG42260 - chr2R_6_22785001 chr2R_22785001 RAL-370 1101 chr2R 22836955 22837002 chr2R 22837113 22837161 6 154 14.5 16.0 15.2 0.4 206 chr2R 22836955 intergenic CG12490 +,CG9825 + chr2R 22837058 intergenic CG9825 +,CG12490 + chr2R 22837161 intergenic CG9825 +,CG12490 + chr2R_6_22835001 chr2R_22835001 RAL-370 1102 chr2R 22843005 22843050 chr2R 22844987 22845031 flea 12 1982 8.5 6.5 7.5 1.4 2026 chr2R 22843005 intergenic CG9826 + chr2R 22844018 intergenic not near genes chr2R 22845031 intergenic not near genes chr2R_12_22840001 chr2R_22840001 RAL-370 1103 chr2R 22978266 22978310 chr2R 22978364 22978409 7 98 4.5 5.0 4.8 1.2 143 chr2R 22978266 intergenic not near genes chr2R 22978338 intergenic not near genes chr2R 22978409 intergenic not near genes chr2R_7_22975001 chr2R_22975001 RAL-370 1104 chr2R 23037257 23037275 chr2R 23037353 23037367 4 91 8.5 3.5 6.0 0.6 110 chr2R 23037257 intron,intron twi +,CG42741 - chr2R 23037312 intron,intron twi +,CG42741 - chr2R 23037367 intron,intron twi +,CG42741 - chr2R_4_23035001 chr2R_23035001 RAL-370 1105 chr2R 23037279 23037300 chr2R 23037346 23037396 5 76 8.0 3.0 5.5 0.8 117 chr2R 23037279 intron,intron twi +,CG42741 - chr2R 23037338 intron,intron twi +,CG42741 - chr2R 23037396 intron,intron twi +,CG42741 - chr2R_5_23035001 chr2R_23035001 RAL-370 1106 chr2R 23052631 23052682 chr2R 23052727 23052777 10 96 4.5 4.5 4.5 1.8 146 chr2R 23052631 intergenic not near genes chr2R 23052704 intergenic not near genes chr2R 23052777 intergenic not near genes chr2R_10_23050001 chr2R_23050001 RAL-370 1107 chr2R 23134822 23134846 chr2R 23134923 23134948 4 100 1.0 10.5 5.8 0.6 126 chr2R 23134822 intergenic not near genes chr2R 23134885 intergenic not near genes chr2R 23134948 intergenic not near genes chr2R_4_23130001 chr2R_23130001 RAL-370 1108 chr2R 23184290 23184296 chr2R 23184363 23184401 4 97 0.0 6.0 3.0 1.0 111 chr2R 23184290 intron,intron CG34371 -,CG13539 + chr2R 23184346 intron,intron CG34371 -,CG13539 + chr2R 23184401 intron,intron CG34371 -,CG13539 + chr2R_4_23180001 chr2R_23180001 RAL-370 1109 chr2R 23188539 23188586 chr2R 23188637 23188684 16 98 3.5 4.0 3.8 3.3 145 chr2R 23188539 intron CG34371 - chr2R 23188612 intron CG34371 - chr2R 23188684 intron CG34371 - chr2R_16_23185001 chr2R_23185001 RAL-370 1110 chr2R 23218989 23219008 chr2R 23219246 23219265 6 255 9.0 0.0 4.5 1.1 276 chr2R 23218989 intergenic not near genes chr2R 23219127 intergenic not near genes chr2R 23219265 intergenic not near genes chr2R_6_23215001 chr2R_23215001 RAL-370 1111 chr2R 23225950 23225985 chr2R 23226074 23226088 9 115 1.5 4.5 3.0 2.2 138 chr2R 23225950 intergenic not near genes chr2R 23226019 intergenic not near genes chr2R 23226088 intergenic not near genes chr2R_9_23225001 chr2R_23225001 RAL-370 1112 chr2R 23236797 23236852 chr2R 23236915 23236961 7 114 1.0 0.0 0.5 4.7 164 chr2R 23236797 intergenic not near genes chr2R 23236879 intergenic not near genes chr2R 23236961 intergenic not near genes chr2R_7_23235001 chr2R_23235001 RAL-370 1113 chr2R 23402589 23402635 chr2R 23407685 23407731 flea 18 5095 3.5 6.5 5.0 3.0 5142 chr2R 23402589 intergenic CG3520 - chr2R 23405160 intergenic not near genes chr2R 23407731 intergenic not near genes chr2R_18_23405001 chr2R_23405001 RAL-370 1114 chr2R 23421066 23421120 chr2R 23421163 23421219 21 95 4.5 3.5 4.0 4.2 153 chr2R 23421066 intergenic CG9815 - chr2R 23421142 intergenic CG9815 - chr2R 23421219 intergenic CG9815 - chr2R_21_23420001 chr2R_23420001 RAL-370 1115 chr2R 23437216 23437242 chr2R 23437313 23437325 6 90 2.0 4.5 3.2 1.4 109 chr2R 23437216 intergenic not near genes chr2R 23437270 intergenic not near genes chr2R 23437325 intergenic not near genes chr2R_6_23435001 chr2R_23435001 RAL-370 1116 chr2R 23450812 23450817 chr2R 23450915 23450917 5 102 11.0 6.5 8.8 0.5 105 chr2R 23450812 intron CG43795 + chr2R 23450864 intron CG43795 + chr2R 23450917 intron CG43795 + chr2R_5_23450001 chr2R_23450001 RAL-370 1117 chr2R 23450819 23450848 chr2R 23450914 23450951 10 102 6.0 6.5 6.2 1.4 132 chr2R 23450819 intron CG43795 + chr2R 23450885 intron CG43795 + chr2R 23450951 intron CG43795 + chr2R_10_23450001 chr2R_23450001 RAL-370 1118 chr2R 23461132 23461138 chr2R 23461234 23461243 4 103 5.5 8.0 6.8 0.5 111 chr2R 23461132 intron CG43795 + chr2R 23461188 intron CG43795 + chr2R 23461243 intron CG43795 + chr2R_4_23460001 chr2R_23460001 RAL-370 1119 chr2R 23508904 23508941 chr2R 23509041 23509078 12 137 2.5 3.0 2.8 3.2 174 chr2R 23508904 intergenic not near genes chr2R 23508991 intergenic not near genes chr2R 23509078 intergenic not near genes chr2R_12_23505001 chr2R_23505001 RAL-370 1120 chr2R 23607017 23607193 chr2R 23607118 23607306 31 104 1.0 1.0 1.0 15.5 289 chr2R 23607017 intron CG17664 - chr2R 23607162 intron CG17664 - chr2R 23607306 intron CG17664 - chr2R_31_23605001 chr2R_23605001 RAL-370 1121 chr2R 23914281 23914305 chr2R 23921925 23921928 412 8 7638 5.0 6.0 5.5 1.2 7647 chr2R 23914281 exon kcc + chr2R 23918104 intron kcc + chr2R 23921928 intron kcc + chr2R_8_23915001 chr2R_23915001 RAL-370 1122 chr2R 23914320 23914331 chr2R 23921921 23921975 412 9 7631 2.5 5.5 4.0 1.8 7655 chr2R 23914320 exon kcc + chr2R 23918148 intron kcc + chr2R 23921975 exon kcc + chr2R_9_23915001 chr2R_23915001 RAL-370 1123 chr2R 23926816 23926852 chr2R 23926915 23926954 14 101 1.5 3.5 2.5 4.0 138 chr2R 23926816 3` UTR,3` UTR Ca-P60A -,CG2812 + chr2R 23926885 3` UTR,3` UTR Ca-P60A -,CG2812 + chr2R 23926954 3` UTR Ca-P60A - chr2R_14_23925001 chr2R_23925001 RAL-370 1124 chr2R 23986493 23986531 chr2R 23986593 23986631 14 100 4.0 6.5 5.2 2.3 138 chr2R 23986493 intron Phm - chr2R 23986562 intron Phm - chr2R 23986631 intron,5` UTR Phm -,CG30178 + chr2R_14_23985001 chr2R_23985001 RAL-370 1125 chr2R 24031361 24031411 chr2R 24031465 24031514 32 101 8.0 8.0 8.0 3.6 153 chr2R 24031361 5` UTR CG30172 - chr2R 24031438 intergenic CG30172 -,Chi - chr2R 24031514 intergenic Chi -,CG30172 - chr2R_32_24030001 chr2R_24030001 RAL-370 1126 chr2R 24058036 24058044 chr2R 24058137 24058144 5 100 11.5 6.0 8.8 0.5 108 chr2R 24058036 intron eIF-5A + chr2R 24058090 intron eIF-5A + chr2R 24058144 intron eIF-5A + chr2R_5_24055001 chr2R_24055001 RAL-370 1127 chr2R 24147067 24147095 chr2R 24154656 24154691 412 6 7593 3.0 5.5 4.2 1.2 7624 chr2R 24147067 intron Dat + chr2R 24150879 intron Dat + chr2R 24154691 intron Dat + chr2R_6_24150001 chr2R_24150001 RAL-370 1128 chr2R 24177214 24177260 chr2R 24184719 24184744 412 15 7502 6.5 7.0 6.8 1.9 7530 chr2R 24177214 3` UTR Nop60B + chr2R 24180979 intron Nop60B + chr2R 24184744 3` UTR Nop60B + chr2R_15_24180001 chr2R_24180001 RAL-370 1129 chr2R 24320165 24320203 chr2R 24320262 24320289 9 94 3.0 2.5 2.8 2.4 124 chr2R 24320165 intergenic not near genes chr2R 24320227 intergenic not near genes chr2R 24320289 intergenic not near genes chr2R_9_24320001 chr2R_24320001 RAL-370 1130 chr2R 24353409 24353446 chr2R 24361789 24361828 roo 5 8379 5.0 2.0 3.5 1.1 8419 chr2R 24353409 intron,intron bs +,CR44811 - chr2R 24357618 intron,intron bs +,CR44811 - chr2R 24361828 intron,intron bs +,CR44811 - chr2R_5_24355001 chr2R_24355001 RAL-370 1131 chr2R 24415303 24415347 chr2R 24415406 24415427 14 103 7.0 4.0 5.5 2.2 124 chr2R 24415303 intergenic CG45068 +,CG45069 +,prom - chr2R 24415365 intergenic prom -,CG45068 +,CG45069 + chr2R 24415427 3` UTR prom - chr2R_14_24415001 chr2R_24415001 RAL-370 1132 chr2R 24430696 24430950 chr2R 24430850 24431053 15 115 0.0 0.0 0.0 15.0 357 chr2R 24430696 5` UTR CG15873 - chr2R 24430874 intergenic CG15873 -,Pgam5-2 - chr2R 24431053 intergenic Pgam5-2 -,CG15873 - chr2R_15_24430001 chr2R_24430001 RAL-370 1133 chr2R 24542306 24542344 chr2R 24542580 24542616 8 268 4.5 4.5 4.5 1.5 310 chr2R 24542306 intron,intron CG4622 -,ITP + chr2R 24542461 intron,intron CG4622 -,ITP + chr2R 24542616 intron,intron CG4622 -,ITP + chr2R_8_24540001 chr2R_24540001 RAL-370 1134 chr2R 24629122 24629175 chr2R 24629242 24629294 15 116 3.5 5.5 4.5 2.7 172 chr2R 24629122 intron CG13594 - chr2R 24629208 intron CG13594 - chr2R 24629294 intron CG13594 - chr2R_15_24625001 chr2R_24625001 RAL-370 1135 chr2R 24636885 24636915 chr2R 24636991 24637009 9 104 5.5 0.0 2.8 2.4 124 chr2R 24636885 intron CG13594 - chr2R 24636947 intron CG13594 - chr2R 24637009 intron CG13594 - chr2R_9_24635001 chr2R_24635001 RAL-370 1136 chr2R 24647557 24647613 chr2R 24655148 24655182 412 10 7580 0.5 4.0 2.2 3.1 7625 chr2R 24647557 intergenic not near genes chr2R 24651370 intergenic not near genes chr2R 24655182 intergenic not near genes chr2R_10_24650001 chr2R_24650001 RAL-370 1137 chr2R 24687643 24687653 chr2R 24687739 24687756 7 103 5.0 6.0 5.5 1.1 113 chr2R 24687643 intergenic Mmp1 - chr2R 24687700 intergenic Mmp1 - chr2R 24687756 intergenic Mmp1 - chr2R_7_24685001 chr2R_24685001 RAL-370 1138 chr2R 24687656 24687666 chr2R 24687738 24687771 6 99 5.0 5.5 5.2 1.0 115 chr2R 24687656 intergenic Mmp1 - chr2R 24687714 intergenic Mmp1 - chr2R 24687771 intergenic Mmp1 - chr2R_6_24685001 chr2R_24685001 RAL-370 1139 chr2R 24737136 24737172 chr2R 24737276 24737310 7 130 4.5 4.0 4.2 1.3 174 chr2R 24737136 intergenic Mid1 - chr2R 24737223 intergenic not near genes chr2R 24737310 intergenic not near genes chr2R_7_24735001 chr2R_24735001 RAL-370 1140 chr2R 24763614 24763635 chr2R 24765588 24765591 G2 6 1977 0.5 2.5 1.5 2.4 1977 chr2R 24763614 exon CG3894 + chr2R 24764602 intron CG3894 + chr2R 24765591 exon CG3894 + chr2R_6_24760001 chr2R_24760001 RAL-370 1141 chr2R 24844091 24844365 chr2R 24844172 24844470 15 101 1.0 3.5 2.2 4.7 379 chr2R 24844091 intergenic not near genes chr2R 24844280 intergenic not near genes chr2R 24844470 intergenic not near genes chr2R_15_24840001 chr2R_24840001 RAL-370 1142 chr2R 24884038 24884079 chr2R 24884139 24884181 17 102 4.5 4.5 4.5 3.1 143 chr2R 24884038 intron NKAIN + chr2R 24884110 intron NKAIN + chr2R 24884181 intron NKAIN + chr2R_17_24880001 chr2R_24880001 RAL-370 1143 chr2R 24983985 24984030 chr2R 24984118 24984153 18 132 4.0 5.0 4.5 3.3 168 chr2R 24983985 intron emp - chr2R 24984069 intron emp - chr2R 24984153 intron emp - chr2R_18_24980001 chr2R_24980001 RAL-370 1144 chr2R 25101255 25101301 chr2R 25101377 25101413 18 119 7.5 3.5 5.5 2.8 158 chr2R 25101255 intron lov - chr2R 25101334 intron lov - chr2R 25101413 intron lov - chr2R_18_25100001 chr2R_25100001 RAL-370 1145 chr2R 25141632 25141681 chr2R 25159342 25159391 roo 9 17710 7.0 7.5 7.2 1.1 17759 chr2R 25141632 intergenic not near genes chr2R 25150512 intergenic not near genes chr2R 25159391 intergenic not near genes chr2R_9_25150001 chr2R_25150001 RAL-370 1146 chr2R 25234748 25234796 chr2R 25234848 25234896 11 99 3.5 4.5 4.0 2.2 148 chr2R 25234748 intron CG9380 - chr2R 25234822 intron CG9380 - chr2R 25234896 intron CG9380 - chr2R_11_25230001 chr2R_25230001 RAL-370 1147 chr3L 68967 68977 chr3L 69073 69083 5 107 12.0 4.0 8.0 0.6 116 chr3L 68967 3` UTR Lsp1gamma + chr3L 69025 intergenic Lsp1gamma +,CR44510 + chr3L 69083 intergenic CR44510 +,Lsp1gamma + chr3L_5_65001 chr3L_65001 RAL-370 1148 chr3L 68978 69014 chr3L 69072 69121 13 103 6.5 4.0 5.2 2.1 143 chr3L 68978 3` UTR Lsp1gamma + chr3L 69050 intergenic Lsp1gamma +,CR44510 + chr3L 69121 intergenic CR44510 +,Lsp1gamma + chr3L_13_65001 chr3L_65001 RAL-370 1149 chr3L 88730 88765 chr3L 90670 90705 15 1938 4.0 4.0 4.0 3.0 1975 chr3L 88730 intergenic not near genes chr3L 89718 intergenic not near genes chr3L 90705 intergenic not near genes chr3L_15_85001 chr3L_85001 RAL-370 1150 chr3L 110191 110242 chr3L 119378 119429 roo 17 9186 5.5 3.5 4.5 3.1 9238 chr3L 110191 intergenic not near genes chr3L 114810 intergenic not near genes chr3L 119429 intergenic not near genes chr3L_17_110001 chr3L_110001 RAL-370 1151 chr3L 159295 159332 chr3L 159405 159412 17 111 3.5 6.0 4.8 2.9 117 chr3L 159295 intron p130CAS + chr3L 159354 intron p130CAS + chr3L 159412 intron p130CAS + chr3L_17_155001 chr3L_155001 RAL-370 1152 chr3L 161686 161715 chr3L 162532 162561 12 846 5.5 6.5 6.0 1.7 875 chr3L 161686 intron p130CAS + chr3L 162124 intron p130CAS + chr3L 162561 intron p130CAS + chr3L_12_160001 chr3L_160001 RAL-370 1153 chr3L 339444 339469 chr3L 339528 339572 10 93 0.0 4.5 2.2 3.1 128 chr3L 339444 intron,intron Ptpmeg +,mthl10 - chr3L 339508 intron,intron Ptpmeg +,mthl10 - chr3L 339572 intron,intron Ptpmeg +,mthl10 - chr3L_10_335001 chr3L_335001 RAL-370 1154 chr3L 340734 340784 chr3L 340857 340888 23 115 4.5 1.0 2.8 6.1 154 chr3L 340734 intron,intron Ptpmeg +,mthl10 - chr3L 340811 intron,intron Ptpmeg +,mthl10 - chr3L 340888 intron,intron Ptpmeg +,mthl10 - chr3L_23_340001 chr3L_340001 RAL-370 1155 chr3L 372161 372193 chr3L 373524 373551 9 1359 2.5 0.5 1.5 3.6 1390 chr3L 372161 intron trh - chr3L 372856 intron trh - chr3L 373551 intron trh - chr3L_9_370001 chr3L_370001 RAL-370 1156 chr3L 402671 402718 chr3L 409742 409790 297 20 7065 4.5 6.5 5.5 3.1 7119 chr3L 402671 intergenic not near genes chr3L 406230 intergenic not near genes chr3L 409790 intergenic not near genes chr3L_20_405001 chr3L_405001 RAL-370 1157 chr3L 501672 501715 chr3L 501758 501765 12 80 3.5 2.5 3.0 3.0 93 chr3L 501672 intron klar - chr3L 501718 intron klar - chr3L 501765 intron klar - chr3L_12_500001 chr3L_500001 RAL-370 1158 chr3L 524728 524775 chr3L 524831 524877 10 98 1.5 3.5 2.5 2.9 149 chr3L 524728 intron klar - chr3L 524802 intron klar - chr3L 524877 intron klar - chr3L_10_520001 chr3L_520001 RAL-370 1159 chr3L 525055 525083 chr3L 525151 525176 4 95 6.0 2.5 4.2 0.8 121 chr3L 525055 intron klar - chr3L 525116 intron klar - chr3L 525176 intron klar - chr3L_4_525001 chr3L_525001 RAL-370 1160 chr3L 554914 554930 chr3L 555007 555032 6 98 2.0 10.0 6.0 0.9 118 chr3L 554914 intron hipk + chr3L 554973 intron hipk + chr3L 555032 intron hipk + chr3L_6_550001 chr3L_550001 RAL-370 1161 chr3L 563959 563992 chr3L 564155 564188 16 197 5.5 5.0 5.2 2.6 229 chr3L 563959 intron hipk + chr3L 564074 intron hipk + chr3L 564188 intron hipk + chr3L_16_560001 chr3L_560001 RAL-370 1162 chr3L 592946 592963 chr3L 593042 593059 4 96 2.0 5.0 3.5 0.9 113 chr3L 592946 intergenic MED14 + chr3L 593002 intergenic MED14 + chr3L 593059 intergenic MED14 + chr3L_4_590001 chr3L_590001 RAL-370 1163 chr3L 606875 606923 chr3L 606971 607022 8 98 2.5 0.0 1.2 3.6 147 chr3L 606875 intergenic Reg-2 - chr3L 606948 intergenic Reg-2 - chr3L 607022 intergenic Reg-2 - chr3L_8_605001 chr3L_605001 RAL-370 1164 chr3L 651371 651396 chr3L 651479 651504 12 107 8.5 3.5 6.0 1.7 133 chr3L 651371 intergenic Gale +,CG3402 - chr3L 651438 intergenic CG3402 -,Gale + chr3L 651504 intergenic CG3402 -,Gale + chr3L_12_650001 chr3L_650001 RAL-370 1165 chr3L 651397 651423 chr3L 651474 651496 13 102 5.0 2.5 3.8 2.7 99 chr3L 651397 intergenic Gale +,CG3402 - chr3L 651446 intergenic CG3402 -,Gale + chr3L 651496 intergenic CG3402 -,Gale + chr3L_13_650001 chr3L_650001 RAL-370 1166 chr3L 665854 665884 chr3L 665957 665987 4 103 1.0 0.5 0.8 2.2 133 chr3L 665854 intergenic not near genes chr3L 665920 intergenic not near genes chr3L 665987 intergenic not near genes chr3L_4_665001 chr3L_665001 RAL-370 1167 chr3L 789893 789904 chr3L 790398 790409 roo 5 505 1.5 2.0 1.8 1.8 516 chr3L 789893 intergenic not near genes chr3L 790151 intergenic not near genes chr3L 790409 intergenic not near genes chr3L_5_790001 chr3L_790001 RAL-370 1168 chr3L 822079 822094 chr3L 822177 822193 5 98 0.0 7.5 3.8 1.0 114 chr3L 822079 intergenic not near genes chr3L 822136 intergenic not near genes chr3L 822193 intergenic not near genes chr3L_5_820001 chr3L_820001 RAL-370 1169 chr3L 843704 843720 chr3L 843805 843820 6 101 7.5 0.0 3.8 1.2 116 chr3L 843704 intergenic Gr61a +,CG13889 + chr3L 843762 intergenic Gr61a +,CG13889 + chr3L 843820 intergenic CG13889 +,Gr61a + chr3L_6_840001 chr3L_840001 RAL-370 1170 chr3L 843743 843749 chr3L 843802 843851 5 92 3.5 0.0 1.8 1.8 108 chr3L 843743 intergenic Gr61a +,CG13889 + chr3L 843797 intergenic Gr61a +,CG13889 + chr3L 843851 intergenic CG13889 +,Gr61a + chr3L_5_840001 chr3L_840001 RAL-370 1171 chr3L 900006 900020 chr3L 900079 900124 4 96 0.5 7.5 4.0 0.8 118 chr3L 900006 intergenic not near genes chr3L 900065 intergenic not near genes chr3L 900124 intergenic not near genes chr3L_4_900001 chr3L_900001 RAL-370 1172 chr3L 901856 901906 chr3L 901954 901999 18 96 1.5 1.5 1.5 7.2 143 chr3L 901856 intergenic not near genes chr3L 901928 intergenic not near genes chr3L 901999 intergenic not near genes chr3L_18_900001 chr3L_900001 RAL-370 1173 chr3L 925157 925208 chr3L 932602 932654 mdg1 13 7443 2.5 2.0 2.2 4.1 7497 chr3L 925157 intron Glut1 + chr3L 928906 intron Glut1 + chr3L 932654 intron Glut1 + chr3L_13_925001 chr3L_925001 RAL-370 1174 chr3L 933890 933942 chr3L 934014 934065 15 123 2.0 6.0 4.0 3.0 175 chr3L 933890 intron Glut1 + chr3L 933978 intron Glut1 + chr3L 934065 intron Glut1 + chr3L_15_930001 chr3L_930001 RAL-370 1175 chr3L 939756 939775 chr3L 940897 940907 jockey 9 1140 2.5 8.5 5.5 1.4 1151 chr3L 939756 intron Glut1 + chr3L 940332 intron Glut1 + chr3L 940907 intron Glut1 + chr3L_9_940001 chr3L_940001 RAL-370 1176 chr3L 939778 939787 chr3L 940893 940927 jockey 4 1134 2.5 7.5 5.0 0.7 1149 chr3L 939778 intron Glut1 + chr3L 940352 intron Glut1 + chr3L 940927 intron Glut1 + chr3L_4_940001 chr3L_940001 RAL-370 1177 chr3L 1010980 1010992 chr3L 1011081 1011091 4 100 6.0 3.0 4.5 0.7 111 chr3L 1010980 intron trio - chr3L 1011036 intron trio - chr3L 1011091 intron trio - chr3L_4_1010001 chr3L_1010001 RAL-370 1178 chr3L 1010995 1011028 chr3L 1011078 1011119 6 95 2.0 2.5 2.2 1.9 124 chr3L 1010995 intron trio - chr3L 1011057 intron trio - chr3L 1011119 intron trio - chr3L_6_1010001 chr3L_1010001 RAL-370 1179 chr3L 1016422 1016462 chr3L 1017480 1017508 4 1058 4.5 0.0 2.2 1.2 1086 chr3L 1016422 intron trio - chr3L 1016965 intron trio - chr3L 1017508 intron trio - chr3L_4_1015001 chr3L_1015001 RAL-370 1180 chr3L 1021358 1021408 chr3L 1021458 1021506 20 97 4.0 6.5 5.2 3.2 148 chr3L 1021358 intron trio - chr3L 1021432 intron trio - chr3L 1021506 intron trio - chr3L_20_1020001 chr3L_1020001 RAL-370 1181 chr3L 1028793 1028841 chr3L 1028898 1028915 12 103 2.0 2.5 2.2 3.8 122 chr3L 1028793 intron trio - chr3L 1028854 intron trio - chr3L 1028915 intron trio - chr3L_12_1025001 chr3L_1025001 RAL-370 1182 chr3L 1040528 1040581 chr3L 1040632 1040684 14 102 5.5 3.0 4.2 2.7 156 chr3L 1040528 intron bab1 - chr3L 1040606 intron bab1 - chr3L 1040684 intron bab1 - chr3L_14_1040001 chr3L_1040001 RAL-370 1183 chr3L 1109618 1109646 chr3L 1109724 1109754 15 107 9.5 2.5 6.0 2.1 136 chr3L 1109618 intergenic not near genes chr3L 1109686 intergenic not near genes chr3L 1109754 intergenic not near genes chr3L_15_1105001 chr3L_1105001 RAL-370 1184 chr3L 1154131 1154152 chr3L 1163301 1163322 roo 7 9170 3.5 5.5 4.5 1.3 9191 chr3L 1154131 intron bab2 - chr3L 1158726 intron bab2 - chr3L 1163322 intron bab2 - chr3L_7_1155001 chr3L_1155001 RAL-370 1185 chr3L 1219574 1219621 chr3L 1227327 1227371 412 19 7749 1.5 4.0 2.8 5.0 7797 chr3L 1219574 intron mwh + chr3L 1223472 intron mwh + chr3L 1227371 intron mwh + chr3L_19_1220001 chr3L_1220001 RAL-370 1186 chr3L 1268137 1268178 chr3L 1268344 1268351 15 197 3.0 0.0 1.5 6.0 214 chr3L 1268137 intron CG9134 + chr3L 1268244 intron CG9134 + chr3L 1268351 intron CG9134 + chr3L_15_1265001 chr3L_1265001 RAL-370 1187 chr3L 1310981 1311026 chr3L 1315840 1315866 5 4847 20.0 29.5 24.8 0.2 4885 chr3L 1310981 exon CG2469 + chr3L 1313424 intergenic CG9186 -,CG9153 + chr3L 1315866 exon CG9153 + chr3L_5_1310001 chr3L_1310001 RAL-370 1188 chr3L 1321544 1321592 chr3L 1321764 1321810 10 219 0.5 3.5 2.0 3.3 266 chr3L 1321544 intron Myo61F + chr3L 1321677 intron Myo61F + chr3L 1321810 intron,3` UTR Myo61F +,CG9184 - chr3L_10_1320001 chr3L_1320001 RAL-370 1189 chr3L 1323817 1323867 chr3L 1323926 1323973 9 107 0.5 4.0 2.2 2.8 156 chr3L 1323817 intron,intron Myo61F +,CR45166 - chr3L 1323895 intron,intron Myo61F +,CR45166 - chr3L 1323973 intron,3` UTR Myo61F +,CR45166 - chr3L_9_1320001 chr3L_1320001 RAL-370 1190 chr3L 1324608 1324653 chr3L 1324701 1324750 9 97 5.0 3.0 4.0 1.8 142 chr3L 1324608 intron Myo61F + chr3L 1324679 intron Myo61F + chr3L 1324750 intron Myo61F + chr3L_9_1320001 chr3L_1320001 RAL-370 1191 chr3L 1370211 1370231 chr3L 1370302 1370321 4 94 2.0 5.5 3.8 0.8 110 chr3L 1370211 intron Ptp61F - chr3L 1370266 intron Ptp61F - chr3L 1370321 intron Ptp61F - chr3L_4_1370001 chr3L_1370001 RAL-370 1192 chr3L 1396737 1396759 chr3L 1396837 1396859 8 100 4.5 8.0 6.2 1.1 122 chr3L 1396737 intron Ptp61F - chr3L 1396798 intron Ptp61F - chr3L 1396859 intron Ptp61F - chr3L_8_1395001 chr3L_1395001 RAL-370 1193 chr3L 1463400 1463443 chr3L 1463500 1463537 11 98 3.5 2.0 2.8 2.9 137 chr3L 1463400 intron Ptp61F - chr3L 1463468 intron Ptp61F - chr3L 1463537 intron Ptp61F - chr3L_11_1460001 chr3L_1460001 RAL-370 1194 chr3L 1474490 1474531 chr3L 1474612 1474659 4 124 2.0 0.0 1.0 2.0 169 chr3L 1474490 intron Ptp61F - chr3L 1474574 intron Ptp61F - chr3L 1474659 5` UTR Ptp61F - chr3L_4_1470001 chr3L_1470001 RAL-370 1195 chr3L 1505984 1506030 chr3L 1513600 1513647 17.6 20 7616 5.5 8.0 6.8 2.6 7663 chr3L 1505984 intron,intron Psa +,cue - chr3L 1509816 intron,intron Psa +,cue - chr3L 1513647 intron,intron Psa +,cue - chr3L_20_1505001 chr3L_1505001 RAL-370 1196 chr3L 1571233 1571478 chr3L 1571326 1571583 8 101 4.5 4.0 4.2 1.5 350 chr3L 1571233 intron CG12004 + chr3L 1571408 intron CG12004 + chr3L 1571583 intron CG12004 + chr3L_8_1570001 chr3L_1570001 RAL-370 1197 chr3L 1585907 1585935 chr3L 1586009 1586038 6 103 0.5 1.5 1.0 3.0 131 chr3L 1585907 intron CG13917 + chr3L 1585972 intron CG13917 + chr3L 1586038 intron CG13917 + chr3L_6_1585001 chr3L_1585001 RAL-370 1198 chr3L 1600481 1600505 chr3L 1600785 1600809 11 304 3.5 4.0 3.8 2.3 328 chr3L 1600481 3` UTR CG13917 + chr3L 1600645 3` UTR CG13917 + chr3L 1600809 3` UTR,3` UTR CG13917 +,CG12104 - chr3L_11_1600001 chr3L_1600001 RAL-370 1199 chr3L 1728501 1728551 chr3L 1728602 1728656 18 102 5.0 5.0 5.0 3.0 155 chr3L 1728501 intron drpr - chr3L 1728578 intron drpr - chr3L 1728656 intron drpr - chr3L_18_1725001 chr3L_1725001 RAL-370 1200 chr3L 1740845 1740882 chr3L 1741097 1741127 pogo 12 252 6.5 2.5 4.5 2.2 282 chr3L 1740845 intron Gk + chr3L 1740986 intron Gk + chr3L 1741127 intron Gk + chr3L_12_1740001 chr3L_1740001 RAL-370 1201 chr3L 1805677 1805702 chr3L 1805871 1805894 7 194 3.0 2.5 2.8 1.8 217 chr3L 1805677 exon CG42676 + chr3L 1805786 intron CG42676 + chr3L 1805894 intron CG42676 + chr3L_7_1805001 chr3L_1805001 RAL-370 1202 chr3L 1809990 1810028 chr3L 1810201 1810238 5 211 0.5 2.5 1.5 2.0 248 chr3L 1809990 intergenic not near genes chr3L 1810114 intergenic GV1 + chr3L 1810238 intergenic GV1 + chr3L_5_1810001 chr3L_1810001 RAL-370 1203 chr3L 1853025 1853046 chr3L 1853129 1853149 5 103 2.5 3.5 3.0 1.2 124 chr3L 1853025 intron CG13936 - chr3L 1853087 intron CG13936 - chr3L 1853149 intron CG13936 - chr3L_5_1850001 chr3L_1850001 RAL-370 1204 chr3L 1924957 1924977 chr3L 1925112 1925135 5 157 0.0 1.5 0.8 2.8 178 chr3L 1924957 exon Dbx + chr3L 1925046 intron Dbx + chr3L 1925135 intron Dbx + chr3L_5_1925001 chr3L_1925001 RAL-370 1205 chr3L 1991117 1991147 chr3L 1991214 1991244 7 98 3.0 4.0 3.5 1.6 127 chr3L 1991117 intergenic not near genes chr3L 1991180 intergenic not near genes chr3L 1991244 intergenic not near genes chr3L_7_1990001 chr3L_1990001 RAL-370 1206 chr3L 1993053 1993105 chr3L 1993153 1993207 18 101 1.5 4.5 3.0 4.5 154 chr3L 1993053 intergenic not near genes chr3L 1993130 intergenic not near genes chr3L 1993207 intergenic not near genes chr3L_18_1990001 chr3L_1990001 RAL-370 1207 chr3L 2023926 2023945 chr3L 2024007 2024049 4 92 4.0 3.5 3.8 0.8 123 chr3L 2023926 intergenic not near genes chr3L 2023988 intergenic not near genes chr3L 2024049 intergenic not near genes chr3L_4_2020001 chr3L_2020001 RAL-370 1208 chr3L 2139193 2139228 chr3L 2139291 2139327 18 99 4.0 1.5 2.8 4.7 134 chr3L 2139193 intron zormin - chr3L 2139260 intron zormin - chr3L 2139327 intron zormin - chr3L_18_2135001 chr3L_2135001 RAL-370 1209 chr3L 2184470 2184524 chr3L 2184589 2184643 24 117 3.0 4.5 3.8 5.0 173 chr3L 2184470 intergenic not near genes chr3L 2184556 intergenic not near genes chr3L 2184643 intergenic not near genes chr3L_24_2180001 chr3L_2180001 RAL-370 1210 chr3L 2199792 2199819 chr3L 2199888 2199915 7 96 0.0 6.5 3.2 1.7 123 chr3L 2199792 intergenic not near genes chr3L 2199854 intergenic not near genes chr3L 2199915 intergenic not near genes chr3L_7_2195001 chr3L_2195001 RAL-370 1211 chr3L 2307983 2308035 chr3L 2308109 2308116 16 115 5.0 4.5 4.8 2.8 133 chr3L 2307983 intergenic not near genes chr3L 2308050 intergenic not near genes chr3L 2308116 intergenic not near genes chr3L_16_2305001 chr3L_2305001 RAL-370 1212 chr3L 2331568 2331609 chr3L 2331662 2331706 11 95 3.0 5.5 4.2 2.1 138 chr3L 2331568 intron MsR1 + chr3L 2331637 intron MsR1 + chr3L 2331706 intron MsR1 + chr3L_11_2330001 chr3L_2330001 RAL-370 1213 chr3L 2447488 2447534 chr3L 2456660 2456710 roo 18 9172 8.0 4.0 6.0 2.6 9222 chr3L 2447488 intron CG45186 + chr3L 2452099 intron CG45186 + chr3L 2456710 intron CG45186 + chr3L_18_2450001 chr3L_2450001 RAL-370 1214 chr3L 2467477 2467486 chr3L 2467594 2467603 4 117 3.5 7.5 5.5 0.6 126 chr3L 2467477 intron CG45186 + chr3L 2467540 intron CG45186 + chr3L 2467603 intron CG45186 + chr3L_4_2465001 chr3L_2465001 RAL-370 1215 chr3L 2492298 2492328 chr3L 2492409 2492439 9 111 3.0 2.5 2.8 2.4 141 chr3L 2492298 intron,3` UTR CG45186 +,CG1146 + chr3L 2492368 intron,3` UTR CG45186 +,CG1146 + chr3L 2492439 intron,3` UTR CG45186 +,CG1146 + chr3L_9_2490001 chr3L_2490001 RAL-370 1216 chr3L 2493812 2493850 chr3L 2493904 2493957 7 99 3.0 0.0 1.5 2.8 145 chr3L 2493812 intron CG45186 + chr3L 2493884 intron CG45186 + chr3L 2493957 intron CG45186 + chr3L_7_2490001 chr3L_2490001 RAL-370 1217 chr3L 2534612 2534641 chr3L 2534712 2534744 6 102 0.0 6.0 3.0 1.5 132 chr3L 2534612 intron Spn - chr3L 2534678 intron Spn - chr3L 2534744 exon Spn - chr3L_6_2530001 chr3L_2530001 RAL-370 1218 chr3L 2560938 2560981 chr3L 2561037 2561080 15 97 2.5 3.0 2.8 3.9 142 chr3L 2560938 intron msn - chr3L 2561009 intron msn - chr3L 2561080 intron msn - chr3L_15_2560001 chr3L_2560001 RAL-370 1219 chr3L 2561511 2561555 chr3L 2561608 2561652 8 96 6.5 2.5 4.5 1.5 141 chr3L 2561511 intron msn - chr3L 2561582 intron msn - chr3L 2561652 intron msn - chr3L_8_2560001 chr3L_2560001 RAL-370 1220 chr3L 2564166 2564196 chr3L 2564265 2564284 8 95 4.5 3.5 4.0 1.6 118 chr3L 2564166 intron msn - chr3L 2564225 intron msn - chr3L 2564284 intron msn - chr3L_8_2560001 chr3L_2560001 RAL-370 1221 chr3L 2591693 2591740 chr3L 2591800 2591843 11 106 2.5 5.0 3.8 2.3 150 chr3L 2591693 intron dos + chr3L 2591768 intron dos + chr3L 2591843 intron dos + chr3L_11_2590001 chr3L_2590001 RAL-370 1222 chr3L 2609661 2609680 chr3L 2609756 2609776 6 96 5.5 1.0 3.2 1.4 115 chr3L 2609661 intron Pxn - chr3L 2609718 intron Pxn - chr3L 2609776 intron Pxn - chr3L_6_2605001 chr3L_2605001 RAL-370 1223 chr3L 2617247 2617260 chr3L 2617353 2617366 4 106 6.0 9.0 7.5 0.5 119 chr3L 2617247 intron Pxn - chr3L 2617306 intron Pxn - chr3L 2617366 intron Pxn - chr3L_4_2615001 chr3L_2615001 RAL-370 1224 chr3L 2683924 2683978 chr3L 2684020 2684042 11 92 4.5 3.0 3.8 2.3 118 chr3L 2683924 intron Fife - chr3L 2683983 intron Fife - chr3L 2684042 intron Fife - chr3L_11_2680001 chr3L_2680001 RAL-370 1225 chr3L 2698400 2698559 chr3L 2698513 2698663 17 101 3.5 6.0 4.8 2.9 263 chr3L 2698400 intron Fife - chr3L 2698532 intron Fife - chr3L 2698663 intron Fife - chr3L_17_2695001 chr3L_2695001 RAL-370 1226 chr3L 2700882 2700900 chr3L 2701058 2701075 4 176 6.5 1.5 4.0 0.8 193 chr3L 2700882 intron Fife - chr3L 2700978 intron Fife - chr3L 2701075 intron Fife - chr3L_4_2700001 chr3L_2700001 RAL-370 1227 chr3L 2700902 2700924 chr3L 2701057 2701100 5 170 3.5 1.5 2.5 1.4 198 chr3L 2700902 intron Fife - chr3L 2701001 intron Fife - chr3L 2701100 intron Fife - chr3L_5_2700001 chr3L_2700001 RAL-370 1228 chr3L 2751440 2751466 chr3L 2755755 2755779 F-element 7 4314 10.5 11.5 11.0 0.6 4339 chr3L 2751440 intron Mrtf - chr3L 2753610 intron Mrtf - chr3L 2755779 intron Mrtf - chr3L_7_2750001 chr3L_2750001 RAL-370 1229 chr3L 2766725 2766759 chr3L 2766842 2766874 9 117 3.0 6.0 4.5 1.6 149 chr3L 2766725 intergenic Mrtf -,Non2 + chr3L 2766800 intergenic Non2 +,Mrtf - chr3L 2766874 intergenic Non2 +,Mrtf - chr3L_9_2765001 chr3L_2765001 RAL-370 1230 chr3L 2795705 2795741 chr3L 2795846 2795884 6 142 1.5 1.5 1.5 2.4 179 chr3L 2795705 intron CG43444 - chr3L 2795794 intron CG43444 - chr3L 2795884 intron CG43444 - chr3L_6_2795001 chr3L_2795001 RAL-370 1231 chr3L 2882089 2882144 chr3L 2882190 2882240 9 98 2.0 1.5 1.8 3.2 151 chr3L 2882089 intergenic not near genes chr3L 2882164 intergenic not near genes chr3L 2882240 intergenic not near genes chr3L_9_2880001 chr3L_2880001 RAL-370 1232 chr3L 2897395 2897419 chr3L 2897521 2897545 9 125 2.0 4.5 3.2 2.1 150 chr3L 2897395 5` UTR Shab + chr3L 2897470 intron Shab + chr3L 2897545 intron Shab + chr3L_9_2895001 chr3L_2895001 RAL-370 1233 chr3L 2927819 2927872 chr3L 2936114 2936169 Tirant 13 8297 4.0 2.0 3.0 3.2 8350 chr3L 2927819 intron Shab + chr3L 2931994 intron Shab + chr3L 2936169 intron Shab + chr3L_13_2930001 chr3L_2930001 RAL-370 1234 chr3L 2987705 2987718 chr3L 2987807 2987820 7 102 6.0 1.0 3.5 1.6 115 chr3L 2987705 intergenic not near genes chr3L 2987762 intergenic not near genes chr3L 2987820 intergenic not near genes chr3L_7_2985001 chr3L_2985001 RAL-370 1235 chr3L 3040310 3040356 chr3L 3042119 3042165 S-element 6 1809 3.0 2.0 2.5 1.7 1855 chr3L 3040310 3` UTR CG2162 + chr3L 3041238 intergenic not near genes chr3L 3042165 intergenic Jafrac2 + chr3L_6_3040001 chr3L_3040001 RAL-370 1236 chr3L 3050884 3050926 chr3L 3050991 3051033 9 100 2.5 0.5 1.5 3.6 149 chr3L 3050884 intron CG32485 + chr3L 3050958 intron CG32485 + chr3L 3051033 exon CG32485 + chr3L_9_3050001 chr3L_3050001 RAL-370 1237 chr3L 3051723 3051750 chr3L 3051985 3052011 pogo 6 262 7.0 3.0 5.0 1.0 288 chr3L 3051723 3` UTR CG32485 + chr3L 3051867 intergenic CG32485 + chr3L 3052011 intergenic CG32485 + chr3L_6_3050001 chr3L_3050001 RAL-370 1238 chr3L 3254077 3254115 chr3L 3254187 3254226 7 111 3.0 3.0 3.0 1.8 149 chr3L 3254077 5` UTR CR43626 + chr3L 3254152 5` UTR CR43626 + chr3L 3254226 5` UTR CR43626 + chr3L_7_3250001 chr3L_3250001 RAL-370 1239 chr3L 3281454 3281469 chr3L 3281932 3281970 Doc 19 501 4.5 2.5 3.5 4.2 516 chr3L 3281454 intron CG12017 + chr3L 3281712 intron CG12017 + chr3L 3281970 intron CG12017 + chr3L_19_3280001 chr3L_3280001 RAL-370 1240 chr3L 3317527 3317553 chr3L 3317626 3317652 4 98 0.0 8.5 4.2 0.8 125 chr3L 3317527 intergenic Drsl5 +,PIG-C - chr3L 3317590 intergenic PIG-C -,Drsl5 + chr3L 3317652 intergenic PIG-C - chr3L_4_3315001 chr3L_3315001 RAL-370 1241 chr3L 3317558 3317566 chr3L 3317616 3317662 5 86 3.0 7.0 5.0 0.8 104 chr3L 3317558 intergenic Drsl5 +,PIG-C - chr3L 3317610 intergenic PIG-C -,Drsl5 + chr3L 3317662 intergenic PIG-C - chr3L_5_3315001 chr3L_3315001 RAL-370 1242 chr3L 3436272 3436316 chr3L 3436371 3436407 17 98 2.5 3.0 2.8 4.5 135 chr3L 3436272 intron eIF5B - chr3L 3436340 intron eIF5B - chr3L 3436407 intron eIF5B - chr3L_17_3435001 chr3L_3435001 RAL-370 1243 chr3L 3455735 3455755 chr3L 3455832 3455852 5 95 1.5 6.0 3.8 1.0 117 chr3L 3455735 intron eIF5B - chr3L 3455794 intron eIF5B - chr3L 3455852 intron eIF5B - chr3L_5_3455001 chr3L_3455001 RAL-370 1244 chr3L 3494176 3494205 chr3L 3494273 3494302 8 97 2.5 2.5 2.5 2.3 126 chr3L 3494176 intron CG42324 + chr3L 3494239 intron CG42324 + chr3L 3494302 intron CG42324 + chr3L_8_3490001 chr3L_3490001 RAL-370 1245 chr3L 3533612 3533659 chr3L 3533732 3533799 15 131 2.5 0.0 1.2 6.8 187 chr3L 3533612 intron Eip63E + chr3L 3533706 intron Eip63E + chr3L 3533799 intron Eip63E + chr3L_15_3530001 chr3L_3530001 RAL-370 1246 chr3L 3581728 3581778 chr3L 3581831 3581882 10 102 2.0 6.5 4.2 1.9 154 chr3L 3581728 intron Eip63E + chr3L 3581805 intron Eip63E + chr3L 3581882 intron Eip63E + chr3L_10_3580001 chr3L_3580001 RAL-370 1247 chr3L 3601279 3601331 chr3L 3606610 3606661 copia 17 5328 3.5 4.5 4.0 3.4 5382 chr3L 3601279 intron Eip63E + chr3L 3603970 intron Eip63E + chr3L 3606661 intron Eip63E + chr3L_17_3600001 chr3L_3600001 RAL-370 1248 chr3L 3619387 3619431 chr3L 3619501 3619545 12 114 3.0 5.5 4.2 2.3 158 chr3L 3619387 intergenic not near genes chr3L 3619466 intergenic not near genes chr3L 3619545 intergenic not near genes chr3L_12_3615001 chr3L_3615001 RAL-370 1249 chr3L 3627221 3627259 chr3L 3627346 3627383 10 122 2.5 5.0 3.8 2.1 162 chr3L 3627221 intron dar1 + chr3L 3627302 intron dar1 + chr3L 3627383 intron dar1 + chr3L_10_3625001 chr3L_3625001 RAL-370 1250 chr3L 3763739 3763756 chr3L 3763840 3763847 5 98 5.5 0.0 2.8 1.3 108 chr3L 3763739 intron CG32264 - chr3L 3763793 intron CG32264 - chr3L 3763847 intron CG32264 - chr3L_5_3760001 chr3L_3760001 RAL-370 1251 chr3L 3766731 3766744 chr3L 3766837 3766850 4 106 4.5 0.0 2.2 1.2 119 chr3L 3766731 intron CG32264 - chr3L 3766790 intron CG32264 - chr3L 3766850 intron CG32264 - chr3L_4_3765001 chr3L_3765001 RAL-370 1252 chr3L 3783251 3783276 chr3L 3783347 3783364 4 94 4.0 1.0 2.5 1.1 113 chr3L 3783251 intron CG32264 - chr3L 3783308 intron CG32264 - chr3L 3783364 intron CG32264 - chr3L_4_3780001 chr3L_3780001 RAL-370 1253 chr3L 3798040 3798074 chr3L 3798139 3798175 12 100 2.5 7.5 5.0 2.0 135 chr3L 3798040 intron CG32264 - chr3L 3798108 intron CG32264 - chr3L 3798175 intron CG32264 - chr3L_12_3795001 chr3L_3795001 RAL-370 1254 chr3L 3802943 3802969 chr3L 3803026 3803072 8 99 3.0 3.0 3.0 2.0 129 chr3L 3802943 intron CG32264 - chr3L 3803008 intron CG32264 - chr3L 3803072 intron CG32264 - chr3L_8_3800001 chr3L_3800001 RAL-370 1255 chr3L 3815034 3815082 chr3L 3815135 3815182 23 100 4.0 5.0 4.5 4.2 148 chr3L 3815034 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815108 intron,3` UTR Scsalpha +,CR43932 - chr3L 3815182 intron,intron Scsalpha +,CR43932 - chr3L_23_3815001 chr3L_3815001 RAL-370 1256 chr3L 3833724 3833748 chr3L 3833985 3834009 pogo 5 261 4.0 2.5 3.2 1.2 285 chr3L 3833724 intron enc + chr3L 3833866 intron enc + chr3L 3834009 intron enc + chr3L_5_3830001 chr3L_3830001 RAL-370 1257 chr3L 3877454 3877464 chr3L 3877597 3877607 8 142 0.0 5.5 2.8 2.1 153 chr3L 3877454 intergenic not near genes chr3L 3877530 intergenic not near genes chr3L 3877607 intergenic not near genes chr3L_8_3875001 chr3L_3875001 RAL-370 1258 chr3L 3888982 3889010 chr3L 3889111 3889143 7 132 5.5 0.0 2.8 1.8 161 chr3L 3888982 intergenic not near genes chr3L 3889062 intergenic not near genes chr3L 3889143 intergenic not near genes chr3L_7_3885001 chr3L_3885001 RAL-370 1259 chr3L 3890944 3890975 chr3L 3891045 3891075 9 101 4.0 0.0 2.0 3.0 131 chr3L 3890944 intergenic not near genes chr3L 3891010 intergenic not near genes chr3L 3891075 intergenic not near genes chr3L_9_3890001 chr3L_3890001 RAL-370 1260 chr3L 3926010 3926042 chr3L 3926123 3926155 9 113 1.5 1.5 1.5 3.6 145 chr3L 3926010 intron Eip63F-1 - chr3L 3926082 intron Eip63F-1 - chr3L 3926155 intron Eip63F-1 - chr3L_9_3925001 chr3L_3925001 RAL-370 1261 chr3L 3932767 3932814 chr3L 3934206 3934252 12 1433 16.5 12.0 14.2 0.8 1485 chr3L 3932767 intron Eip63F-1 - chr3L 3933510 intron Eip63F-1 - chr3L 3934252 intron Eip63F-1 - chr3L_12_3930001 chr3L_3930001 RAL-370 1262 chr3L 3932072 3932075 chr3L 3934180 3934185 4 2108 25.5 14.0 19.8 0.2 2113 chr3L 3932072 intron Eip63F-1 - chr3L 3933128 intron Eip63F-1 - chr3L 3934185 intron Eip63F-1 - chr3L_4_3930001 chr3L_3930001 RAL-370 1263 chr3L 3932104 3932118 chr3L 3934213 3934226 5 2108 31.0 12.0 21.5 0.2 2122 chr3L 3932104 intron Eip63F-1 - chr3L 3933165 intron Eip63F-1 - chr3L 3934226 intron Eip63F-1 - chr3L_5_3930001 chr3L_3930001 RAL-370 1264 chr3L 4015715 4015765 chr3L 4015818 4015868 20 101 5.5 3.0 4.2 3.8 153 chr3L 4015715 intergenic not near genes chr3L 4015792 intergenic not near genes chr3L 4015868 intergenic not near genes chr3L_20_4015001 chr3L_4015001 RAL-370 1265 chr3L 4099351 4099402 chr3L 4099448 4099527 14 118 3.5 0.5 2.0 4.7 176 chr3L 4099351 intron CG14995 - chr3L 4099439 intron CG14995 - chr3L 4099527 intron CG14995 - chr3L_14_4095001 chr3L_4095001 RAL-370 1266 chr3L 4164779 4164791 chr3L 4164875 4164885 5 95 2.5 0.0 1.2 2.3 106 chr3L 4164779 exon mas - chr3L 4164832 intron mas - chr3L 4164885 exon mas - chr3L_5_4160001 chr3L_4160001 RAL-370 1267 chr3L 4208733 4208755 chr3L 4208821 4208853 6 96 7.0 2.5 4.8 1.0 120 chr3L 4208733 intron,intron CG43367 +,Cpr64Aa - chr3L 4208793 intron,intron CG43367 +,Cpr64Aa - chr3L 4208853 intron,intron CG43367 +,Cpr64Aa - chr3L_6_4205001 chr3L_4205001 RAL-370 1268 chr3L 4229714 4229763 chr3L 4229827 4229848 11 100 5.0 5.5 5.2 1.8 134 chr3L 4229714 intron ImpL2 - chr3L 4229781 intron ImpL2 - chr3L 4229848 intron ImpL2 - chr3L_11_4225001 chr3L_4225001 RAL-370 1269 chr3L 4328733 4328765 chr3L 4336250 4336282 412 8 7516 3.5 3.5 3.5 1.8 7549 chr3L 4328733 intron Cip4 - chr3L 4332508 intron Cip4 - chr3L 4336282 exon Cip4 - chr3L_8_4330001 chr3L_4330001 RAL-370 1270 chr3L 4342388 4342439 chr3L 4342487 4342516 8 92 2.5 5.0 3.8 1.7 128 chr3L 4342388 intron Cip4 - chr3L 4342452 intron Cip4 - chr3L 4342516 intron Cip4 - chr3L_8_4340001 chr3L_4340001 RAL-370 1271 chr3L 4343493 4343515 chr3L 4343590 4343612 5 97 0.5 4.0 2.2 1.6 119 chr3L 4343493 intron Cip4 - chr3L 4343552 intron Cip4 - chr3L 4343612 intron Cip4 - chr3L_5_4340001 chr3L_4340001 RAL-370 1272 chr3L 4344884 4345066 chr3L 4345009 4345162 6 101 0.0 0.0 0.0 6.0 278 chr3L 4344884 intron Cip4 - chr3L 4345023 intron Cip4 - chr3L 4345162 intron Cip4 - chr3L_6_4345001 chr3L_4345001 RAL-370 1273 chr3L 4364208 4364228 chr3L 4364317 4364337 4 109 1.0 2.5 1.8 1.4 129 chr3L 4364208 intergenic Cip4 -,mRpS6 + chr3L 4364272 intergenic Cip4 -,mRpS6 + chr3L 4364337 intergenic mRpS6 +,Cip4 - chr3L_4_4360001 chr3L_4360001 RAL-370 1274 chr3L 4477275 4477318 chr3L 4477398 4477442 4 124 2.5 2.0 2.2 1.2 167 chr3L 4477275 intergenic not near genes chr3L 4477358 intergenic not near genes chr3L 4477442 intergenic not near genes chr3L_4_4475001 chr3L_4475001 RAL-370 1275 chr3L 4484703 4484747 chr3L 4484801 4484845 9 95 1.5 4.0 2.8 2.4 142 chr3L 4484703 intergenic CG11350 +,CG13722 - chr3L 4484774 intergenic CG13722 -,CG11350 + chr3L 4484845 intergenic CG13722 -,CG11350 + chr3L_9_4480001 chr3L_4480001 RAL-370 1276 chr3L 4617033 4617090 chr3L 4617210 4617255 10 172 3.0 4.0 3.5 2.2 222 chr3L 4617033 intron Src64B - chr3L 4617144 intron Src64B - chr3L 4617255 intron Src64B - chr3L_10_4615001 chr3L_4615001 RAL-370 1277 chr3L 4723322 4723344 chr3L 4723437 4723459 7 115 2.5 6.0 4.2 1.3 137 chr3L 4723322 intron RhoGEF64C + chr3L 4723390 intron RhoGEF64C + chr3L 4723459 intron RhoGEF64C + chr3L_7_4720001 chr3L_4720001 RAL-370 1278 chr3L 4837869 4837911 chr3L 4837968 4838009 12 97 2.0 6.0 4.0 2.4 140 chr3L 4837869 3` UTR CG13707 - chr3L 4837939 3` UTR CG13707 - chr3L 4838009 3` UTR CG13707 - chr3L_12_4835001 chr3L_4835001 RAL-370 1279 chr3L 4846566 4846603 chr3L 4846682 4846715 10 111 7.0 4.0 5.5 1.5 149 chr3L 4846566 intergenic not near genes chr3L 4846640 intergenic not near genes chr3L 4846715 intergenic not near genes chr3L_10_4845001 chr3L_4845001 RAL-370 1280 chr3L 4858290 4858311 chr3L 4858400 4858420 4 105 9.0 2.0 5.5 0.6 130 chr3L 4858290 intergenic not near genes chr3L 4858355 intergenic not near genes chr3L 4858420 intergenic not near genes chr3L_4_4855001 chr3L_4855001 RAL-370 1281 chr3L 4858318 4858332 chr3L 4858392 4858427 7 86 4.0 1.5 2.8 1.8 109 chr3L 4858318 intergenic not near genes chr3L 4858372 intergenic not near genes chr3L 4858427 intergenic not near genes chr3L_7_4855001 chr3L_4855001 RAL-370 1282 chr3L 4989174 4989190 chr3L 4989284 4989299 6 110 0.0 0.0 0.0 6.0 125 chr3L 4989174 intron Con - chr3L 4989236 intron Con - chr3L 4989299 intron Con - chr3L_6_4985001 chr3L_4985001 RAL-370 1283 chr3L 5034136 5034184 chr3L 5043308 5043356 roo 16 9170 2.5 2.5 2.5 4.6 9220 chr3L 5034136 intron Con - chr3L 5038746 intron Con - chr3L 5043356 intron Con - chr3L_16_5035001 chr3L_5035001 RAL-370 1284 chr3L 5104466 5104505 chr3L 5124619 5124659 10 20153 4.5 3.0 3.8 2.1 20193 chr3L 5104466 intergenic not near genes chr3L 5114562 intergenic not near genes chr3L 5124659 intergenic not near genes chr3L_10_5110001 chr3L_5110001 RAL-370 1285 chr3L 5203076 5203115 chr3L 5203200 5203237 13 124 1.0 4.5 2.8 3.4 161 chr3L 5203076 intron shep - chr3L 5203156 intron shep - chr3L 5203237 intron shep - chr3L_13_5200001 chr3L_5200001 RAL-370 1286 chr3L 5212224 5212264 chr3L 5212322 5212365 11 91 4.5 3.0 3.8 2.3 141 chr3L 5212224 intron shep - chr3L 5212294 intron shep - chr3L 5212365 intron shep - chr3L_11_5210001 chr3L_5210001 RAL-370 1287 chr3L 5327450 5327473 chr3L 5327554 5327578 6 105 4.0 4.5 4.2 1.2 128 chr3L 5327450 intergenic not near genes chr3L 5327514 intergenic not near genes chr3L 5327578 intergenic not near genes chr3L_6_5325001 chr3L_5325001 RAL-370 1288 chr3L 5409257 5409302 chr3L 5409360 5409397 12 102 4.5 4.0 4.2 2.3 140 chr3L 5409257 intergenic not near genes chr3L 5409327 intergenic not near genes chr3L 5409397 intergenic not near genes chr3L_12_5405001 chr3L_5405001 RAL-370 1289 chr3L 5482933 5482952 chr3L 5483153 5483176 8 222 8.5 27.5 18.0 0.4 243 chr3L 5482933 exon CG4835 + chr3L 5483054 exon CG4835 + chr3L 5483176 exon CG4835 + chr3L_8_5480001 chr3L_5480001 RAL-370 1290 chr3L 5484747 5484794 chr3L 5485099 5485146 9 348 1.5 4.0 2.8 2.4 399 chr3L 5484747 intergenic not near genes chr3L 5484946 intergenic not near genes chr3L 5485146 intergenic not near genes chr3L_9_5480001 chr3L_5480001 RAL-370 1291 chr3L 5493180 5493222 chr3L 5493345 5493359 12 163 1.5 3.5 2.5 3.4 179 chr3L 5493180 intergenic CR44520 - chr3L 5493270 intergenic CR44520 - chr3L 5493359 intergenic CR44520 - chr3L_12_5490001 chr3L_5490001 RAL-370 1292 chr3L 5498367 5498432 chr3L 5498476 5498504 10 94 2.5 6.5 4.5 1.8 137 chr3L 5498367 exon blanks - chr3L 5498436 exon blanks - chr3L 5498504 exon blanks - chr3L_10_5495001 chr3L_5495001 RAL-370 1293 chr3L 5690453 5690493 chr3L 5690550 5690591 17 95 6.0 6.0 6.0 2.4 138 chr3L 5690453 intron sif + chr3L 5690522 intron sif + chr3L 5690591 intron sif + chr3L_17_5690001 chr3L_5690001 RAL-370 1294 chr3L 5869446 5869479 chr3L 5869588 5869621 7 141 4.5 0.5 2.5 2.0 175 chr3L 5869446 intergenic not near genes chr3L 5869534 intergenic not near genes chr3L 5869621 intergenic not near genes chr3L_7_5865001 chr3L_5865001 RAL-370 1295 chr3L 5908063 5908107 chr3L 5908157 5908207 6 99 0.5 0.5 0.5 4.0 144 chr3L 5908063 intron CG13288 + chr3L 5908135 intron CG13288 + chr3L 5908207 intron CG13288 + chr3L_6_5905001 chr3L_5905001 RAL-370 1296 chr3L 5910013 5910062 chr3L 5910274 5910323 pogo 12 261 3.0 4.5 3.8 2.5 310 chr3L 5910013 intron CG13288 + chr3L 5910168 intron CG13288 + chr3L 5910323 intron CG13288 + chr3L_12_5910001 chr3L_5910001 RAL-370 1297 chr3L 5926305 5926349 chr3L 5926510 5926536 BS 13 205 4.5 8.5 6.5 1.7 231 chr3L 5926305 intron Vap-33B + chr3L 5926420 intron Vap-33B + chr3L 5926536 intron Vap-33B + chr3L_13_5925001 chr3L_5925001 RAL-370 1298 chr3L 6001664 6001713 chr3L 6004384 6004432 jockey 9 2720 5.5 1.0 3.2 2.1 2768 chr3L 6001664 intron PVRAP + chr3L 6003048 intron PVRAP + chr3L 6004432 intron PVRAP + chr3L_9_6000001 chr3L_6000001 RAL-370 1299 chr3L 6040362 6040390 chr3L 6042721 6042741 Doc 15 2372 2.5 5.5 4.0 3.0 2379 chr3L 6040362 intergenic Jon65Aiv + chr3L 6041552 intergenic not near genes chr3L 6042741 intergenic not near genes chr3L_15_6040001 chr3L_6040001 RAL-370 1300 chr3L 6052126 6052152 chr3L 6052232 6052258 10 104 0.0 4.0 2.0 3.3 132 chr3L 6052126 intergenic Jon65Aii +,Jon65Aiii + chr3L 6052192 intergenic Jon65Aii + chr3L 6052258 intergenic Jon65Aii + chr3L_10_6050001 chr3L_6050001 RAL-370 1301 chr3L 6064999 6065039 chr3L 6065096 6065135 6 97 2.5 1.5 2.0 2.0 136 chr3L 6064999 intergenic not near genes chr3L 6065067 intergenic not near genes chr3L 6065135 intergenic not near genes chr3L_6_6065001 chr3L_6065001 RAL-370 1302 chr3L 6116678 6116726 chr3L 6116782 6116830 14 104 4.0 3.5 3.8 2.9 152 chr3L 6116678 intron Ets65A + chr3L 6116754 intron Ets65A + chr3L 6116830 intron Ets65A + chr3L_14_6115001 chr3L_6115001 RAL-370 1303 chr3L 6165077 6165088 chr3L 6165200 6165212 4 124 7.0 9.5 8.2 0.4 135 chr3L 6165077 3` UTR CG10289 - chr3L 6165144 3` UTR CG10289 - chr3L 6165212 3` UTR CG10289 - chr3L_4_6165001 chr3L_6165001 RAL-370 1304 chr3L 6220899 6220938 chr3L 6230071 6230104 roo 15 9172 4.5 5.0 4.8 2.6 9205 chr3L 6220899 5` UTR pncr008:3L + chr3L 6225502 intergenic not near genes chr3L 6230104 intergenic not near genes chr3L_15_6225001 chr3L_6225001 RAL-370 1305 chr3L 6334997 6335038 chr3L 6335487 6335521 297 9 490 4.5 1.5 3.0 2.2 524 chr3L 6334997 intron CG13300 - chr3L 6335259 intron CG13300 - chr3L 6335521 intron CG13300 - chr3L_9_6335001 chr3L_6335001 RAL-370 1306 chr3L 6405640 6405681 chr3L 6432124 6432165 roo 8 26484 7.0 3.0 5.0 1.3 26525 chr3L 6405640 intron CG42747 + chr3L 6418902 intron CG42747 + chr3L 6432165 intron CG42747 + chr3L_8_6415001 chr3L_6415001 RAL-370 1307 chr3L 6512240 6512294 chr3L 6512346 6512350 12 94 4.0 2.0 3.0 3.0 110 chr3L 6512240 intron sfl + chr3L 6512295 intron sfl + chr3L 6512350 intron sfl + chr3L_12_6510001 chr3L_6510001 RAL-370 1308 chr3L 6555741 6555854 chr3L 6555841 6555952 7 99 0.0 0.0 0.0 7.0 211 chr3L 6555741 intron CG18769 + chr3L 6555846 intron CG18769 + chr3L 6555952 intron CG18769 + chr3L_7_6555001 chr3L_6555001 RAL-370 1309 chr3L 6562847 6562869 chr3L 6562944 6562969 4 98 2.5 4.0 3.2 1.0 122 chr3L 6562847 intron CG18769 + chr3L 6562908 intron CG18769 + chr3L 6562969 intron CG18769 + chr3L_4_6560001 chr3L_6560001 RAL-370 1310 chr3L 6583771 6583820 chr3L 6583877 6583882 10 98 5.0 0.0 2.5 2.9 111 chr3L 6583771 intron,intron CG18769 +,jv - chr3L 6583826 intron,intron CG18769 +,jv - chr3L 6583882 intron,intron CG18769 +,jv - chr3L_10_6580001 chr3L_6580001 RAL-370 1311 chr3L 6620594 6620605 chr3L 6621053 6621065 Rt1c 7 459 9.5 12.0 10.8 0.6 471 chr3L 6620594 intergenic not near genes chr3L 6620830 intergenic not near genes chr3L 6621065 intergenic not near genes chr3L_7_6620001 chr3L_6620001 RAL-370 1312 chr3L 6652093 6652104 chr3L 6652156 6652202 8 93 6.0 5.0 5.5 1.2 109 chr3L 6652093 intergenic not near genes chr3L 6652148 intergenic not near genes chr3L 6652202 intergenic not near genes chr3L_8_6650001 chr3L_6650001 RAL-370 1313 chr3L 6781105 6781153 chr3L 6783138 6783183 Doc 12 2032 2.5 0.0 1.2 5.5 2078 chr3L 6781105 intergenic not near genes chr3L 6782144 intergenic not near genes chr3L 6783183 intergenic not near genes chr3L_12_6780001 chr3L_6780001 RAL-370 1314 chr3L 6835911 6835922 chr3L 6836009 6836020 8 98 5.5 2.0 3.8 1.7 109 chr3L 6835911 intergenic not near genes chr3L 6835966 intergenic not near genes chr3L 6836020 intergenic not near genes chr3L_8_6835001 chr3L_6835001 RAL-370 1315 chr3L 6855928 6855942 chr3L 6860715 6860746 Doc 6 4801 3.0 2.5 2.8 1.6 4818 chr3L 6855928 intergenic not near genes chr3L 6858337 intergenic not near genes chr3L 6860746 intergenic not near genes chr3L_6_6855001 chr3L_6855001 RAL-370 1316 chr3L 6868706 6868743 chr3L 6868803 6868841 6 97 0.0 5.5 2.8 1.6 135 chr3L 6868706 intergenic not near genes chr3L 6868774 intergenic not near genes chr3L 6868841 intergenic not near genes chr3L_6_6865001 chr3L_6865001 RAL-370 1317 chr3L 6887501 6887542 chr3L 6895013 6895054 roo 15 7512 6.5 3.5 5.0 2.5 7553 chr3L 6887501 intergenic not near genes chr3L 6891278 intergenic not near genes chr3L 6895054 intergenic not near genes chr3L_15_6890001 chr3L_6890001 RAL-370 1318 chr3L 6897654 6897684 chr3L 6897763 6897793 10 108 0.5 4.0 2.2 3.1 139 chr3L 6897654 intergenic not near genes chr3L 6897724 intergenic not near genes chr3L 6897793 intergenic not near genes chr3L_10_6895001 chr3L_6895001 RAL-370 1319 chr3L 6934317 6934362 chr3L 6934448 6934493 10 131 3.0 1.0 2.0 3.3 176 chr3L 6934317 exon CG14820 + chr3L 6934405 intron CG14820 + chr3L 6934493 exon CG14820 + chr3L_10_6930001 chr3L_6930001 RAL-370 1320 chr3L 6974504 6974523 chr3L 6974625 6974643 6 121 2.0 10.5 6.2 0.8 139 chr3L 6974504 intron Galphai - chr3L 6974574 intron Galphai - chr3L 6974643 intron Galphai - chr3L_6_6970001 chr3L_6970001 RAL-370 1321 chr3L 6994871 6994911 chr3L 6995502 6995538 BS 7 630 0.0 3.5 1.8 2.5 667 chr3L 6994871 intergenic bin + chr3L 6995204 intergenic not near genes chr3L 6995538 intergenic not near genes chr3L_7_6995001 chr3L_6995001 RAL-370 1322 chr3L 7041905 7041924 chr3L 7042001 7042021 7 96 3.0 5.0 4.0 1.4 116 chr3L 7041905 intron Mp + chr3L 7041963 intron Mp + chr3L 7042021 intron Mp + chr3L_7_7040001 chr3L_7040001 RAL-370 1323 chr3L 7104030 7104074 chr3L 7104154 7104198 17 124 4.5 4.0 4.2 3.3 168 chr3L 7104030 intron form3 + chr3L 7104114 intron form3 + chr3L 7104198 intron form3 + chr3L_17_7100001 chr3L_7100001 RAL-370 1324 chr3L 7112563 7112614 chr3L 7112669 7112684 10 99 5.0 5.5 5.2 1.6 121 chr3L 7112563 intron form3 + chr3L 7112624 intron form3 + chr3L 7112684 intron form3 + chr3L_10_7110001 chr3L_7110001 RAL-370 1325 chr3L 7129931 7129969 chr3L 7130142 7130178 BS 4 211 1.5 2.5 2.0 1.3 247 chr3L 7129931 intergenic CG15829 + chr3L 7130054 intergenic CG15829 + chr3L 7130178 intergenic not near genes chr3L_4_7130001 chr3L_7130001 RAL-370 1326 chr3L 7150018 7150043 chr3L 7150117 7150140 7 99 0.0 7.5 3.8 1.5 122 chr3L 7150018 intron corn - chr3L 7150079 intron corn - chr3L 7150140 intron corn - chr3L_7_7150001 chr3L_7150001 RAL-370 1327 chr3L 7258965 7258990 chr3L 7259094 7259120 5 129 0.0 6.5 3.2 1.2 155 chr3L 7258965 intron CG14830 - chr3L 7259042 intron CG14830 - chr3L 7259120 intron CG14830 - chr3L_5_7255001 chr3L_7255001 RAL-370 1328 chr3L 7264773 7264915 chr3L 7264889 7264984 18 103 0.0 0.0 0.0 18.0 211 chr3L 7264773 intergenic not near genes chr3L 7264878 intergenic not near genes chr3L 7264984 intergenic not near genes chr3L_18_7260001 chr3L_7260001 RAL-370 1329 chr3L 7377300 7377346 chr3L 7380424 7380471 297 13 3125 3.5 2.0 2.8 3.4 3171 chr3L 7377300 intron SMSr - chr3L 7378886 intron SMSr - chr3L 7380471 intron SMSr - chr3L_13_7375001 chr3L_7375001 RAL-370 1330 chr3L 7444001 7444024 chr3L 7444117 7444142 12 117 7.0 0.0 3.5 2.7 141 chr3L 7444001 intron CG42458 + chr3L 7444072 intron CG42458 + chr3L 7444142 intron CG42458 + chr3L_12_7440001 chr3L_7440001 RAL-370 1331 chr3L 7450685 7450706 chr3L 7450776 7450786 9 99 4.5 5.0 4.8 1.6 101 chr3L 7450685 intron CG42458 + chr3L 7450736 intron CG42458 + chr3L 7450786 intron CG42458 + chr3L_9_7450001 chr3L_7450001 RAL-370 1332 chr3L 7498747 7498785 chr3L 7503544 7503582 F-element 10 4797 6.0 4.5 5.2 1.6 4835 chr3L 7498747 5` UTR CG8539 - chr3L 7501164 intergenic not near genes chr3L 7503582 intergenic not near genes chr3L_10_7500001 chr3L_7500001 RAL-370 1333 chr3L 7574841 7574855 chr3L 7574938 7574952 6 97 0.0 1.5 0.8 3.3 111 chr3L 7574841 intergenic not near genes chr3L 7574896 intergenic not near genes chr3L 7574952 intergenic not near genes chr3L_6_7570001 chr3L_7570001 RAL-370 1334 chr3L 7576194 7576243 chr3L 7576302 7576346 16 107 4.0 3.5 3.8 3.3 152 chr3L 7576194 intergenic not near genes chr3L 7576270 intergenic not near genes chr3L 7576346 intergenic not near genes chr3L_16_7575001 chr3L_7575001 RAL-370 1335 chr3L 7591156 7591171 chr3L 7591266 7591267 4 106 3.5 8.5 6.0 0.6 111 chr3L 7591156 intergenic CG7716 - chr3L 7591212 intergenic CG7716 - chr3L 7591267 intergenic CG7716 - chr3L_4_7590001 chr3L_7590001 RAL-370 1336 chr3L 7650529 7650571 chr3L 7650706 7650749 11 178 2.5 0.0 1.2 5.0 220 chr3L 7650529 intergenic CG32373 + chr3L 7650639 5` UTR CG32373 + chr3L 7650749 5` UTR CG32373 + chr3L_11_7650001 chr3L_7650001 RAL-370 1337 chr3L 7767539 7767567 chr3L 7767690 7767696 6 147 12.0 6.5 9.2 0.6 157 chr3L 7767539 intron,exon Clk -,CG32371 - chr3L 7767618 intron,exon Clk -,CG32371 - chr3L 7767696 intron,exon Clk -,CG32371 - chr3L_6_7765001 chr3L_7765001 RAL-370 1338 chr3L 7792035 7792080 chr3L 7792139 7792184 17 103 8.5 4.0 6.2 2.4 149 chr3L 7792035 intron CG32369 - chr3L 7792110 intron CG32369 - chr3L 7792184 intron CG32369 - chr3L_17_7790001 chr3L_7790001 RAL-370 1339 chr3L 7793692 7793737 chr3L 7800764 7800809 297 9 7072 5.0 5.0 5.0 1.5 7117 chr3L 7793692 intron CG32369 - chr3L 7797250 intron CG32369 - chr3L 7800809 intron CG32369 - chr3L_9_7795001 chr3L_7795001 RAL-370 1340 chr3L 7867793 7867942 chr3L 7867891 7868026 6 105 1.5 1.5 1.5 2.4 233 chr3L 7867793 intergenic Pdp1 - chr3L 7867910 intergenic not near genes chr3L 7868026 intergenic not near genes chr3L_6_7865001 chr3L_7865001 RAL-370 1341 chr3L 7884445 7884469 chr3L 7884544 7884569 4 99 0.0 2.5 1.2 1.8 124 chr3L 7884445 intron CG32365 + chr3L 7884507 intron CG32365 + chr3L 7884569 intron CG32365 + chr3L_4_7880001 chr3L_7880001 RAL-370 1342 chr3L 7886506 7886547 chr3L 7889031 7889085 Stalker4 17 2533 2.0 3.0 2.5 4.9 2579 chr3L 7886506 intron CG32365 + chr3L 7887796 intron CG32365 + chr3L 7889085 intron CG32365 + chr3L_17_7885001 chr3L_7885001 RAL-370 1343 chr3L 7916820 7916858 chr3L 7926011 7926049 roo 9 9188 1.5 2.5 2.0 3.0 9229 chr3L 7916820 3` UTR syd - chr3L 7921434 intron syd - chr3L 7926049 3` UTR syd - chr3L_9_7920001 chr3L_7920001 RAL-370 1344 chr3L 7939439 7939470 chr3L 7939541 7939569 9 101 4.5 4.0 4.2 1.7 130 chr3L 7939439 intergenic not near genes chr3L 7939504 intergenic not near genes chr3L 7939569 intergenic not near genes chr3L_9_7935001 chr3L_7935001 RAL-370 1345 chr3L 7985360 7985389 chr3L 7987699 7987737 NOF 7 2346 6.5 6.5 6.5 0.9 2377 chr3L 7985360 intron nmo + chr3L 7986548 intron nmo + chr3L 7987737 intron nmo + chr3L_7_7985001 chr3L_7985001 RAL-370 1346 chr3L 8033231 8033241 chr3L 8033311 8033336 4 86 4.0 10.0 7.0 0.5 105 chr3L 8033231 intron nmo + chr3L 8033284 intron nmo + chr3L 8033336 intron nmo + chr3L_4_8030001 chr3L_8030001 RAL-370 1347 chr3L 8062840 8062852 chr3L 8062937 8062947 5 96 2.5 4.5 3.5 1.1 107 chr3L 8062840 intergenic not near genes chr3L 8062894 intergenic not near genes chr3L 8062947 intergenic not near genes chr3L_5_8060001 chr3L_8060001 RAL-370 1348 chr3L 8149746 8149772 chr3L 8149872 8149898 8 126 4.0 2.5 3.2 1.9 152 chr3L 8149746 intron CG13676 - chr3L 8149822 intron CG13676 - chr3L 8149898 intron CG13676 - chr3L_8_8145001 chr3L_8145001 RAL-370 1349 chr3L 8295776 8295825 chr3L 8295954 8296003 12 178 4.0 6.5 5.2 1.9 227 chr3L 8295776 intergenic CG7201 - chr3L 8295890 intergenic not near genes chr3L 8296003 intergenic not near genes chr3L_12_8295001 chr3L_8295001 RAL-370 1350 chr3L 8316496 8316516 chr3L 8316594 8316614 4 98 1.0 3.0 2.0 1.3 118 chr3L 8316496 intergenic not near genes chr3L 8316555 intergenic not near genes chr3L 8316614 intergenic not near genes chr3L_4_8315001 chr3L_8315001 RAL-370 1351 chr3L 8395829 8395862 chr3L 8395929 8395951 6 102 4.5 1.5 3.0 1.5 122 chr3L 8395829 intergenic CG7120 + chr3L 8395890 intergenic CG7120 + chr3L 8395951 intergenic CG7120 + chr3L_6_8395001 chr3L_8395001 RAL-370 1352 chr3L 8443547 8443583 chr3L 8443648 8443685 7 101 3.5 1.5 2.5 2.0 138 chr3L 8443547 3` UTR CG6983 - chr3L 8443616 3` UTR CG6983 - chr3L 8443685 3` UTR CG6983 - chr3L_7_8440001 chr3L_8440001 RAL-370 1353 chr3L 8498299 8498321 chr3L 8505763 8505808 blood 7 7483 3.0 5.0 4.0 1.4 7509 chr3L 8498299 intron CG43163 - chr3L 8502054 intron CG43163 - chr3L 8505808 intron CG43163 - chr3L_7_8500001 chr3L_8500001 RAL-370 1354 chr3L 8546013 8546057 chr3L 8546118 8546162 7 105 2.5 2.0 2.2 2.2 149 chr3L 8546013 intron rhea + chr3L 8546088 intron rhea + chr3L 8546162 intron rhea + chr3L_7_8545001 chr3L_8545001 RAL-370 1355 chr3L 8584897 8584950 chr3L 8585011 8585064 16 112 3.0 7.5 5.2 2.6 167 chr3L 8584897 intron CG43078 + chr3L 8584980 intron CG43078 + chr3L 8585064 intron CG43078 + chr3L_16_8580001 chr3L_8580001 RAL-370 1356 chr3L 8644619 8644656 chr3L 8644707 8644725 9 87 1.5 0.5 1.0 4.5 106 chr3L 8644619 intergenic CG13305 - chr3L 8644672 intergenic CG13305 - chr3L 8644725 intergenic CG13305 - chr3L_9_8640001 chr3L_8640001 RAL-370 1357 chr3L 8682592 8682640 chr3L 8682699 8682747 14 107 5.0 2.5 3.8 2.9 155 chr3L 8682592 intergenic not near genes chr3L 8682670 intergenic not near genes chr3L 8682747 intergenic not near genes chr3L_14_8680001 chr3L_8680001 RAL-370 1358 chr3L 8782108 8782149 chr3L 8782254 8782295 17 145 3.0 2.5 2.8 4.5 187 chr3L 8782108 intron Fhos + chr3L 8782202 intron Fhos + chr3L 8782295 intron Fhos + chr3L_17_8780001 chr3L_8780001 RAL-370 1359 chr3L 8784841 8784864 chr3L 8784944 8784967 11 102 2.0 5.5 3.8 2.3 126 chr3L 8784841 intron Fhos + chr3L 8784904 intron Fhos + chr3L 8784967 intron Fhos + chr3L_11_8780001 chr3L_8780001 RAL-370 1360 chr3L 8791258 8791303 chr3L 8796698 8796742 I-element 7 5439 6.0 0.0 3.0 1.8 5484 chr3L 8791258 exon Fhos + chr3L 8794000 intron Fhos + chr3L 8796742 intron Fhos + chr3L_7_8790001 chr3L_8790001 RAL-370 1361 chr3L 8827515 8827538 chr3L 8827605 8827618 5 96 2.5 8.0 5.2 0.8 103 chr3L 8827515 5` UTR dally + chr3L 8827566 5` UTR dally + chr3L 8827618 5` UTR dally + chr3L_5_8825001 chr3L_8825001 RAL-370 1362 chr3L 8830735 8830781 chr3L 8830851 8830876 11 115 4.5 4.5 4.5 2.0 141 chr3L 8830735 intron dally + chr3L 8830806 intron dally + chr3L 8830876 intron dally + chr3L_11_8830001 chr3L_8830001 RAL-370 1363 chr3L 8839720 8839748 chr3L 8839819 8839848 6 100 2.0 1.0 1.5 2.4 128 chr3L 8839720 intron dally + chr3L 8839784 intron dally + chr3L 8839848 intron dally + chr3L_6_8835001 chr3L_8835001 RAL-370 1364 chr3L 8846092 8846133 chr3L 8846196 8846220 11 102 6.0 0.0 3.0 2.8 128 chr3L 8846092 intron dally + chr3L 8846156 intron dally + chr3L 8846220 intron dally + chr3L_11_8845001 chr3L_8845001 RAL-370 1365 chr3L 8861514 8861552 chr3L 8861625 8861663 8 111 2.0 3.0 2.5 2.3 149 chr3L 8861514 intron dally + chr3L 8861588 intron dally + chr3L 8861663 intron dally + chr3L_8_8860001 chr3L_8860001 RAL-370 1366 chr3L 8884419 8884425 chr3L 8884606 8884627 4 203 4.0 0.5 2.2 1.2 208 chr3L 8884419 intron dally + chr3L 8884523 intron dally + chr3L 8884627 intron dally + chr3L_4_8880001 chr3L_8880001 RAL-370 1367 chr3L 8950531 8950583 chr3L 8950645 8950696 14 113 1.5 3.5 2.5 4.0 165 chr3L 8950531 intron,intron CG43783 -,orb2 - chr3L 8950614 intron,intron CG43783 -,orb2 - chr3L 8950696 intron,intron CG43783 -,orb2 - chr3L_14_8950001 chr3L_8950001 RAL-370 1368 chr3L 8959379 8959401 chr3L 8959560 8959582 10 181 1.0 3.0 2.0 3.3 203 chr3L 8959379 intron CG13313 + chr3L 8959480 intron CG13313 + chr3L 8959582 intron CG13313 + chr3L_10_8955001 chr3L_8955001 RAL-370 1369 chr3L 9009940 9009977 chr3L 9010063 9010101 13 124 0.5 3.0 1.8 4.6 161 chr3L 9009940 intergenic CG5194 - chr3L 9010020 intergenic CG5194 - chr3L 9010101 intergenic CG5194 - chr3L_13_9010001 chr3L_9010001 RAL-370 1370 chr3L 9028043 9028083 chr3L 9028164 9028206 9 121 3.5 4.5 4.0 1.8 163 chr3L 9028043 intergenic not near genes chr3L 9028124 intergenic not near genes chr3L 9028206 intergenic not near genes chr3L_9_9025001 chr3L_9025001 RAL-370 1371 chr3L 9067297 9067349 chr3L 9067396 9067448 17 99 2.5 3.0 2.8 4.5 151 chr3L 9067297 3` UTR CG4911 - chr3L 9067372 3` UTR CG4911 - chr3L 9067448 3` UTR CG4911 - chr3L_17_9065001 chr3L_9065001 RAL-370 1372 chr3L 9076914 9076959 chr3L 9084487 9084494 412 14 7572 5.0 6.0 5.5 2.2 7580 chr3L 9076914 exon Tequila + chr3L 9080704 intron Tequila + chr3L 9084494 exon Tequila + chr3L_14_9080001 chr3L_9080001 RAL-370 1373 chr3L 9096184 9096189 chr3L 9096307 9096312 4 123 14.0 1.0 7.5 0.5 128 chr3L 9096184 intergenic not near genes chr3L 9096248 intergenic not near genes chr3L 9096312 intergenic not near genes chr3L_4_9095001 chr3L_9095001 RAL-370 1374 chr3L 9130540 9130566 chr3L 9134321 9134332 412 6 3778 9.0 5.0 7.0 0.8 3792 chr3L 9130540 intergenic bol - chr3L 9132436 intergenic not near genes chr3L 9134332 intergenic Dhpr + chr3L_6_9130001 chr3L_9130001 RAL-370 1375 chr3L 9164682 9164726 chr3L 9166167 9166174 hobo 13 1483 7.0 0.5 3.8 2.7 1492 chr3L 9164682 intron Rdl - chr3L 9165428 intron Rdl - chr3L 9166174 intron Rdl - chr3L_13_9165001 chr3L_9165001 RAL-370 1376 chr3L 9172275 9172285 chr3L 9172378 9172388 4 102 4.0 4.0 4.0 0.8 113 chr3L 9172275 intron Rdl - chr3L 9172332 intron Rdl - chr3L 9172388 intron Rdl - chr3L_4_9170001 chr3L_9170001 RAL-370 1377 chr3L 9172286 9172297 chr3L 9172357 9172372 6 92 3.0 2.5 2.8 1.6 86 chr3L 9172286 intron Rdl - chr3L 9172329 intron Rdl - chr3L 9172372 intron Rdl - chr3L_6_9170001 chr3L_9170001 RAL-370 1378 chr3L 9213223 9213234 chr3L 9213323 9213334 6 100 4.5 4.5 4.5 1.1 111 chr3L 9213223 intron CG4476 + chr3L 9213278 intron CG4476 + chr3L 9213334 intron CG4476 + chr3L_6_9210001 chr3L_9210001 RAL-370 1379 chr3L 9219244 9219254 chr3L 9219913 9219943 jockey 4 680 4.5 3.5 4.0 0.8 699 chr3L 9219244 intergenic not near genes chr3L 9219594 intergenic not near genes chr3L 9219943 intergenic not near genes chr3L_4_9215001 chr3L_9215001 RAL-370 1380 chr3L 9219260 9219276 chr3L 9219911 9219930 jockey 6 665 3.0 3.0 3.0 1.5 670 chr3L 9219260 intergenic not near genes chr3L 9219595 intergenic not near genes chr3L 9219930 intergenic not near genes chr3L_6_9215001 chr3L_9215001 RAL-370 1381 chr3L 9237479 9237488 chr3L 9237576 9237587 4 98 8.5 0.0 4.2 0.8 108 chr3L 9237479 intergenic not near genes chr3L 9237533 intergenic not near genes chr3L 9237587 intergenic not near genes chr3L_4_9235001 chr3L_9235001 RAL-370 1382 chr3L 9270602 9270644 chr3L 9278376 9278377 roo 11 7768 5.0 2.5 3.8 2.3 7775 chr3L 9270602 intron GluRIB + chr3L 9274490 intron GluRIB + chr3L 9278377 intron GluRIB + chr3L_11_9270001 chr3L_9270001 RAL-370 1383 chr3L 9344195 9344212 chr3L 9344293 9344310 7 97 0.0 7.0 3.5 1.6 115 chr3L 9344195 intron PGRP-LC + chr3L 9344252 intron PGRP-LC + chr3L 9344310 intron PGRP-LC + chr3L_7_9340001 chr3L_9340001 RAL-370 1384 chr3L 9344214 9344217 chr3L 9344282 9344315 4 90 0.0 6.0 3.0 1.0 101 chr3L 9344214 intron PGRP-LC + chr3L 9344264 intron PGRP-LC + chr3L 9344315 intron PGRP-LC + chr3L_4_9340001 chr3L_9340001 RAL-370 1385 chr3L 9348447 9348704 chr3L 9348968 9349063 9 482 0.0 0.5 0.2 7.5 616 chr3L 9348447 intergenic PGRP-LC + chr3L 9348755 intergenic PGRP-LC + chr3L 9349063 intergenic not near genes chr3L_9_9345001 chr3L_9345001 RAL-370 1386 chr3L 9359566 9359610 chr3L 9359677 9359720 10 110 4.5 2.5 3.5 2.2 154 chr3L 9359566 3` UTR CG32039 + chr3L 9359643 3` UTR CG32039 + chr3L 9359720 3` UTR CG32039 + chr3L_10_9355001 chr3L_9355001 RAL-370 1387 chr3L 9437920 9437965 chr3L 9438051 9438095 12 130 2.5 2.5 2.5 3.4 175 chr3L 9437920 intron MTF-1 + chr3L 9438008 intron MTF-1 + chr3L 9438095 intron MTF-1 + chr3L_12_9435001 chr3L_9435001 RAL-370 1388 chr3L 9443492 9443542 chr3L 9445298 9445349 S-element 10 1805 1.5 4.5 3.0 2.5 1857 chr3L 9443492 intron CG33926 + chr3L 9444420 intron CG33926 + chr3L 9445349 intron CG33926 + chr3L_10_9440001 chr3L_9440001 RAL-370 1389 chr3L 9447004 9447054 chr3L 9447135 9447185 14 131 5.0 4.0 4.5 2.5 181 chr3L 9447004 exon CG3529 + chr3L 9447094 intron CG3529 + chr3L 9447185 intron CG3529 + chr3L_14_9445001 chr3L_9445001 RAL-370 1390 chr3L 9533758 9533781 chr3L 9541316 9541347 412 4 7562 0.5 5.5 3.0 1.0 7589 chr3L 9533758 intergenic not near genes chr3L 9537552 intergenic not near genes chr3L 9541347 intergenic not near genes chr3L_4_9535001 chr3L_9535001 RAL-370 1391 chr3L 9572276 9572326 chr3L 9572375 9572425 10 95 3.5 1.5 2.5 2.9 149 chr3L 9572276 intron CG42673 + chr3L 9572350 intron CG42673 + chr3L 9572425 intron CG42673 + chr3L_10_9570001 chr3L_9570001 RAL-370 1392 chr3L 9613870 9613921 chr3L 9613977 9614028 10 107 2.0 0.0 1.0 5.0 158 chr3L 9613870 3` UTR CG3280 + chr3L 9613949 intergenic CG3280 + chr3L 9614028 intergenic CG3280 + chr3L_10_9610001 chr3L_9610001 RAL-370 1393 chr3L 9637837 9637886 chr3L 9637934 9637988 16 100 5.5 1.5 3.5 3.6 151 chr3L 9637837 intron fry - chr3L 9637912 intron fry - chr3L 9637988 intron fry - chr3L_16_9635001 chr3L_9635001 RAL-370 1394 chr3L 9639038 9639062 chr3L 9639143 9639166 12 105 0.0 11.5 5.8 1.8 128 chr3L 9639038 intron fry - chr3L 9639102 intron fry - chr3L 9639166 intron fry - chr3L_12_9635001 chr3L_9635001 RAL-370 1395 chr3L 9646798 9646837 chr3L 9646915 9646953 8 117 2.5 1.5 2.0 2.7 155 chr3L 9646798 intron,intron fry -,CG33696 + chr3L 9646876 intron,intron fry -,CG33696 + chr3L 9646953 intron,intron fry -,CG33696 + chr3L_8_9645001 chr3L_9645001 RAL-370 1396 chr3L 9676473 9676516 chr3L 9676569 9676612 10 96 3.5 2.0 2.8 2.6 139 chr3L 9676473 intron fry - chr3L 9676542 intron fry - chr3L 9676612 intron fry - chr3L_10_9675001 chr3L_9675001 RAL-370 1397 chr3L 9684185 9684212 chr3L 9684304 9684331 9 118 8.5 0.5 4.5 1.6 146 chr3L 9684185 3` UTR CG6767 - chr3L 9684258 3` UTR CG6767 - chr3L 9684331 3` UTR CG6767 - chr3L_9_9680001 chr3L_9680001 RAL-370 1398 chr3L 9824147 9824167 chr3L 9824246 9824266 10 99 2.0 0.0 1.0 5.0 119 chr3L 9824147 intron CG43897 + chr3L 9824206 intron CG43897 + chr3L 9824266 intron CG43897 + chr3L_10_9820001 chr3L_9820001 RAL-370 1399 chr3L 9918863 9918881 chr3L 9918977 9918996 6 114 10.5 4.5 7.5 0.7 133 chr3L 9918863 intron CG34356 + chr3L 9918930 intron CG34356 + chr3L 9918996 intron CG34356 + chr3L_6_9915001 chr3L_9915001 RAL-370 1400 chr3L 9918882 9918911 chr3L 9918974 9919018 17 112 4.5 4.0 4.2 3.3 136 chr3L 9918882 intron CG34356 + chr3L 9918950 intron CG34356 + chr3L 9919018 intron CG34356 + chr3L_17_9915001 chr3L_9915001 RAL-370 1401 chr3L 9929653 9929700 chr3L 9938453 9938501 roo 13 8798 5.5 5.5 5.5 2.0 8848 chr3L 9929653 intron CG34356 + chr3L 9934077 intron CG34356 + chr3L 9938501 intron CG34356 + chr3L_13_9930001 chr3L_9930001 RAL-370 1402 chr3L 10004075 10004113 chr3L 10004175 10004212 5 100 0.0 4.5 2.2 1.6 137 chr3L 10004075 exon dpr6 + chr3L 10004144 intron dpr6 + chr3L 10004212 intron dpr6 + chr3L_5_10000001 chr3L_10000001 RAL-370 1403 chr3L 10007172 10007198 chr3L 10007295 10007310 9 122 2.5 4.5 3.5 2.0 138 chr3L 10007172 intron dpr6 + chr3L 10007241 intron dpr6 + chr3L 10007310 intron dpr6 + chr3L_9_10005001 chr3L_10005001 RAL-370 1404 chr3L 10214714 10214830 chr3L 10214821 10214950 9 119 0.0 0.0 0.0 9.0 236 chr3L 10214714 intergenic not near genes chr3L 10214832 intergenic not near genes chr3L 10214950 intergenic not near genes chr3L_9_10210001 chr3L_10210001 RAL-370 1405 chr3L 10222746 10222775 chr3L 10222846 10222875 5 100 0.5 9.5 5.0 0.8 129 chr3L 10222746 intron scramb1 - chr3L 10222810 intron scramb1 - chr3L 10222875 intron scramb1 - chr3L_5_10220001 chr3L_10220001 RAL-370 1406 chr3L 10298654 10298692 chr3L 10298756 10298797 7 106 0.0 1.0 0.5 4.7 143 chr3L 10298654 intergenic not near genes chr3L 10298726 intergenic not near genes chr3L 10298797 intergenic not near genes chr3L_7_10295001 chr3L_10295001 RAL-370 1407 chr3L 10300033 10300053 chr3L 10300145 10300165 6 111 2.0 1.5 1.8 2.1 132 chr3L 10300033 intergenic not near genes chr3L 10300099 intergenic not near genes chr3L 10300165 intergenic not near genes chr3L_6_10300001 chr3L_10300001 RAL-370 1408 chr3L 10308733 10308751 chr3L 10308826 10308848 7 96 5.0 2.5 3.8 1.5 115 chr3L 10308733 intergenic not near genes chr3L 10308790 intergenic not near genes chr3L 10308848 intergenic not near genes chr3L_7_10305001 chr3L_10305001 RAL-370 1409 chr3L 10308753 10308764 chr3L 10308825 10308861 5 90 3.5 3.0 3.2 1.2 108 chr3L 10308753 intergenic not near genes chr3L 10308807 intergenic not near genes chr3L 10308861 intergenic not near genes chr3L_5_10305001 chr3L_10305001 RAL-370 1410 chr3L 10328106 10328124 chr3L 10328238 10328256 4 128 4.0 5.0 4.5 0.7 150 chr3L 10328106 intergenic not near genes chr3L 10328181 intergenic not near genes chr3L 10328256 intergenic not near genes chr3L_4_10325001 chr3L_10325001 RAL-370 1411 chr3L 10348635 10348672 chr3L 10348772 10348809 17 136 2.5 0.5 1.5 6.8 174 chr3L 10348635 intron CR44327 + chr3L 10348722 intron CR44327 + chr3L 10348809 intron CR44327 + chr3L_17_10345001 chr3L_10345001 RAL-370 1412 chr3L 10386369 10386418 chr3L 10386466 10386515 16 96 2.5 3.0 2.8 4.2 146 chr3L 10386369 intergenic CR45245 + chr3L 10386442 intergenic CR45245 + chr3L 10386515 5` UTR CR45245 + chr3L_16_10385001 chr3L_10385001 RAL-370 1413 chr3L 10414928 10414955 chr3L 10417319 10417347 Doc 9 2391 0.5 4.5 2.5 2.6 2419 chr3L 10414928 intergenic CG12362 + chr3L 10416138 intergenic not near genes chr3L 10417347 intergenic not near genes chr3L_9_10415001 chr3L_10415001 RAL-370 1414 chr3L 10414963 10414970 chr3L 10417316 10417362 Doc 4 2380 0.5 4.5 2.5 1.1 2399 chr3L 10414963 intergenic CG12362 + chr3L 10416162 intergenic not near genes chr3L 10417362 intergenic not near genes chr3L_4_10415001 chr3L_10415001 RAL-370 1415 chr3L 10430059 10430101 chr3L 10430156 10430174 6 93 3.5 0.0 1.8 2.1 115 chr3L 10430059 3` UTR Ir67b - chr3L 10430116 3` UTR Ir67b - chr3L 10430174 3` UTR Ir67b - chr3L_6_10430001 chr3L_10430001 RAL-370 1416 chr3L 10469914 10469952 chr3L 10470010 10470048 9 94 7.0 1.0 4.0 1.8 134 chr3L 10469914 intergenic not near genes chr3L 10469981 intergenic not near genes chr3L 10470048 intergenic not near genes chr3L_9_10465001 chr3L_10465001 RAL-370 1417 chr3L 10551461 10551486 chr3L 10551568 10551593 10 107 0.0 4.5 2.2 3.1 132 chr3L 10551461 intron A2bp1 + chr3L 10551527 intron A2bp1 + chr3L 10551593 intron A2bp1 + chr3L_10_10550001 chr3L_10550001 RAL-370 1418 chr3L 10553079 10553122 chr3L 10553182 10553224 10 101 2.5 3.5 3.0 2.5 145 chr3L 10553079 intron A2bp1 + chr3L 10553152 intron A2bp1 + chr3L 10553224 intron A2bp1 + chr3L_10_10550001 chr3L_10550001 RAL-370 1419 chr3L 10584264 10584295 chr3L 10584371 10584400 8 107 3.5 1.5 2.5 2.3 136 chr3L 10584264 intron A2bp1 + chr3L 10584332 intron A2bp1 + chr3L 10584400 intron A2bp1 + chr3L_8_10580001 chr3L_10580001 RAL-370 1420 chr3L 10621835 10621875 chr3L 10621942 10621982 5 107 1.0 5.0 3.0 1.2 147 chr3L 10621835 intergenic not near genes chr3L 10621908 intergenic not near genes chr3L 10621982 intergenic not near genes chr3L_5_10620001 chr3L_10620001 RAL-370 1421 chr3L 10653328 10653359 chr3L 10653433 10653462 8 105 2.5 3.0 2.8 2.1 134 chr3L 10653328 intron CG32066 - chr3L 10653395 intron CG32066 - chr3L 10653462 intron CG32066 - chr3L_8_10650001 chr3L_10650001 RAL-370 1422 chr3L 10654106 10654148 chr3L 10654211 10654247 10 105 3.5 1.5 2.5 2.9 141 chr3L 10654106 intron CG32066 - chr3L 10654176 intron CG32066 - chr3L 10654247 intron CG32066 - chr3L_10_10650001 chr3L_10650001 RAL-370 1423 chr3L 10654950 10655003 chr3L 10655050 10655103 22 92 2.5 4.5 3.5 4.9 153 chr3L 10654950 intron CG32066 - chr3L 10655026 intron CG32066 - chr3L 10655103 intron CG32066 - chr3L_22_10655001 chr3L_10655001 RAL-370 1424 chr3L 10683521 10683555 chr3L 10683731 10683757 4 206 6.0 5.0 5.5 0.6 236 chr3L 10683521 intron simj + chr3L 10683639 intron simj + chr3L 10683757 intron simj + chr3L_4_10680001 chr3L_10680001 RAL-370 1425 chr3L 10721969 10722012 chr3L 10722071 10722110 10 98 0.0 0.0 0.0 10.0 141 chr3L 10721969 intergenic not near genes chr3L 10722040 intergenic not near genes chr3L 10722110 intergenic not near genes chr3L_10_10720001 chr3L_10720001 RAL-370 1426 chr3L 10762813 10762858 chr3L 10762916 10762921 5 95 2.5 0.5 1.5 2.0 108 chr3L 10762813 intergenic not near genes chr3L 10762867 intergenic not near genes chr3L 10762921 intergenic not near genes chr3L_5_10760001 chr3L_10760001 RAL-370 1427 chr3L 10889213 10889238 chr3L 10889313 10889337 5 99 12.5 5.5 9.0 0.5 124 chr3L 10889213 intergenic not near genes chr3L 10889275 intergenic not near genes chr3L 10889337 intergenic not near genes chr3L_5_10885001 chr3L_10885001 RAL-370 1428 chr3L 10889240 10889260 chr3L 10889310 10889354 8 90 4.5 4.5 4.5 1.5 114 chr3L 10889240 intergenic not near genes chr3L 10889297 intergenic not near genes chr3L 10889354 intergenic not near genes chr3L_8_10885001 chr3L_10885001 RAL-370 1429 chr3L 10941417 10941424 chr3L 10941522 10941529 7 105 4.0 0.0 2.0 2.3 112 chr3L 10941417 intergenic not near genes chr3L 10941473 intergenic not near genes chr3L 10941529 intergenic not near genes chr3L_7_10940001 chr3L_10940001 RAL-370 1430 chr3L 10956436 10956468 chr3L 10956574 10956606 9 135 0.5 1.0 0.8 5.0 170 chr3L 10956436 intergenic not near genes chr3L 10956521 intergenic not near genes chr3L 10956606 intergenic not near genes chr3L_9_10955001 chr3L_10955001 RAL-370 1431 chr3L 11042100 11042110 chr3L 11042259 11042269 4 159 8.0 0.0 4.0 0.8 169 chr3L 11042100 intron CG43693 - chr3L 11042184 intron CG43693 - chr3L 11042269 intron CG43693 - chr3L_4_11040001 chr3L_11040001 RAL-370 1432 chr3L 11054966 11055020 chr3L 11055090 11055144 24 123 3.5 3.5 3.5 5.3 178 chr3L 11054966 intron CG7888 + chr3L 11055055 intron CG7888 + chr3L 11055144 intron CG7888 + chr3L_24_11055001 chr3L_11055001 RAL-370 1433 chr3L 11067188 11067218 chr3L 11071207 11071238 11 4021 37.5 40.0 38.8 0.3 4050 chr3L 11067188 3` UTR,exon CG45101 +,SuUR + chr3L 11069213 exon CG6310 - chr3L 11071238 intron Mocs1 + chr3L_11_11065001 chr3L_11065001 RAL-370 1434 chr3L 11087046 11087081 chr3L 11088853 11088890 S-element 4 1808 3.5 3.0 3.2 1.0 1844 chr3L 11087046 intron JIL-1 - chr3L 11087968 intron JIL-1 - chr3L 11088890 intron JIL-1 - chr3L_4_11085001 chr3L_11085001 RAL-370 1435 chr3L 11105275 11105325 chr3L 11107006 11107042 X-element 7 1727 1.0 2.5 1.8 2.5 1767 chr3L 11105275 intergenic not near genes chr3L 11106158 intergenic not near genes chr3L 11107042 exon CG32073 - chr3L_7_11105001 chr3L_11105001 RAL-370 1436 chr3L 11113975 11113995 chr3L 11114069 11114091 6 96 2.5 0.0 1.2 2.7 116 chr3L 11113975 intergenic fd68A -,Sod - chr3L 11114033 intergenic fd68A -,Sod - chr3L 11114091 intergenic fd68A -,Sod - chr3L_6_11110001 chr3L_11110001 RAL-370 1437 chr3L 11127906 11127957 chr3L 11128027 11128078 13 120 1.5 3.0 2.2 4.1 172 chr3L 11127906 intron CG42575 + chr3L 11127992 intron CG42575 + chr3L 11128078 intron CG42575 + chr3L_13_11125001 chr3L_11125001 RAL-370 1438 chr3L 11131791 11131813 chr3L 11132075 11132088 5 282 5.0 3.5 4.2 1.0 297 chr3L 11131791 intron CG42575 + chr3L 11131940 intron,3` UTR CG42575 +,CG32074 - chr3L 11132088 intron,exon CG42575 +,CG32074 - chr3L_5_11130001 chr3L_11130001 RAL-370 1439 chr3L 11135509 11135795 chr3L 11135759 11135900 14 142 0.5 0.5 0.5 9.3 391 chr3L 11135509 intergenic CG14143 + chr3L 11135704 intergenic CG14143 +,CG32082 + chr3L 11135900 intergenic CG32082 +,CG14143 + chr3L_14_11135001 chr3L_11135001 RAL-370 1440 chr3L 11194313 11194328 chr3L 11194450 11194467 5 138 2.5 8.0 5.2 0.8 154 chr3L 11194313 intron GlcAT-P - chr3L 11194390 intron GlcAT-P - chr3L 11194467 intron GlcAT-P - chr3L_5_11190001 chr3L_11190001 RAL-370 1441 chr3L 11264456 11264485 chr3L 11271416 11271457 17.6 5 6969 8.0 5.5 6.8 0.6 7001 chr3L 11264456 intergenic not near genes chr3L 11267956 intergenic not near genes chr3L 11271457 intergenic not near genes chr3L_5_11265001 chr3L_11265001 RAL-370 1442 chr3L 11304819 11304870 chr3L 11304936 11304942 7 110 0.0 0.0 0.0 7.0 123 chr3L 11304819 intergenic not near genes chr3L 11304880 intergenic not near genes chr3L 11304942 intergenic not near genes chr3L_7_11300001 chr3L_11300001 RAL-370 1443 chr3L 11329678 11329721 chr3L 11332895 11332946 jockey 11 3218 3.0 3.0 3.0 2.8 3268 chr3L 11329678 intergenic not near genes chr3L 11331312 intergenic not near genes chr3L 11332946 intergenic not near genes chr3L_11_11330001 chr3L_11330001 RAL-370 1444 chr3L 11432902 11432939 chr3L 11433001 11433038 10 98 2.0 4.0 3.0 2.5 136 chr3L 11432902 intergenic not near genes chr3L 11432970 intergenic not near genes chr3L 11433038 intergenic not near genes chr3L_10_11430001 chr3L_11430001 RAL-370 1445 chr3L 11456890 11456915 chr3L 11457008 11457032 4 118 3.0 0.0 1.5 1.6 142 chr3L 11456890 intergenic CG12289 - chr3L 11456961 intergenic CG12289 - chr3L 11457032 intergenic CG12289 - chr3L_4_11455001 chr3L_11455001 RAL-370 1446 chr3L 11471564 11471608 chr3L 11471660 11471706 8 93 3.0 3.0 3.0 2.0 142 chr3L 11471564 intergenic not near genes chr3L 11471635 intergenic not near genes chr3L 11471706 intergenic not near genes chr3L_8_11470001 chr3L_11470001 RAL-370 1447 chr3L 11564788 11564813 chr3L 11572408 11572427 412 5 7621 5.0 2.5 3.8 1.0 7639 chr3L 11564788 exon CG33267 + chr3L 11568608 intron CG33267 + chr3L 11572427 exon CG33267 + chr3L_5_11565001 chr3L_11565001 RAL-370 1448 chr3L 11579547 11579584 chr3L 11579673 11579691 13 123 3.0 2.5 2.8 3.4 144 chr3L 11579547 intergenic CG43390 - chr3L 11579619 intergenic CG43390 - chr3L 11579691 intergenic CG43390 - chr3L_13_11575001 chr3L_11575001 RAL-370 1449 chr3L 11663730 11663758 chr3L 11663875 11663903 9 145 2.5 0.0 1.2 4.1 173 chr3L 11663730 intron CG32085 - chr3L 11663816 intron CG32085 - chr3L 11663903 intron CG32085 - chr3L_9_11660001 chr3L_11660001 RAL-370 1450 chr3L 11673906 11673956 chr3L 11674001 11674052 17 96 4.5 4.0 4.2 3.3 146 chr3L 11673906 intron CG32085 - chr3L 11673979 intron CG32085 - chr3L 11674052 intron CG32085 - chr3L_17_11670001 chr3L_11670001 RAL-370 1451 chr3L 11678078 11678125 chr3L 11678185 11678231 13 107 1.0 4.0 2.5 3.7 153 chr3L 11678078 intron CG32085 - chr3L 11678154 intron CG32085 - chr3L 11678231 intron CG32085 - chr3L_13_11675001 chr3L_11675001 RAL-370 1452 chr3L 11723067 11723115 chr3L 11727882 11727930 Doc 12 4815 2.5 1.0 1.8 4.3 4863 chr3L 11723067 3` UTR Bmcp + chr3L 11725498 intron Bmcp + chr3L 11727930 3` UTR Bmcp + chr3L_12_11725001 chr3L_11725001 RAL-370 1453 chr3L 11729661 11729701 chr3L 11729757 11729797 12 93 5.5 2.0 3.8 2.5 136 chr3L 11729661 exon CG32088 + chr3L 11729729 intron CG32088 + chr3L 11729797 exon CG32088 + chr3L_12_11725001 chr3L_11725001 RAL-370 1454 chr3L 11743998 11744020 chr3L 11744125 11744148 6 128 6.0 0.5 3.2 1.4 150 chr3L 11743998 exon CG6024 - chr3L 11744073 intron CG6024 - chr3L 11744148 intron CG6024 - chr3L_6_11740001 chr3L_11740001 RAL-370 1455 chr3L 11757898 11757936 chr3L 11758015 11758053 7 117 1.5 0.0 0.8 3.9 155 chr3L 11757898 intron CG6024 - chr3L 11757976 intron CG6024 - chr3L 11758053 intron CG6024 - chr3L_7_11755001 chr3L_11755001 RAL-370 1456 chr3L 11849317 11849351 chr3L 11849436 11849471 12 118 4.0 4.0 4.0 2.4 154 chr3L 11849317 intergenic not near genes chr3L 11849394 intergenic not near genes chr3L 11849471 intergenic not near genes chr3L_12_11845001 chr3L_11845001 RAL-370 1457 chr3L 11864540 11864581 chr3L 11865853 11865890 pogo 19 1311 5.0 5.5 5.2 3.1 1350 chr3L 11864540 intron CG44837 - chr3L 11865215 intron CG44837 - chr3L 11865890 intron CG44837 - chr3L_19_11865001 chr3L_11865001 RAL-370 1458 chr3L 11872639 11872689 chr3L 11873001 11873051 13 361 3.5 2.5 3.0 3.2 412 chr3L 11872639 intron CG44837 - chr3L 11872845 intron CG44837 - chr3L 11873051 intron CG44837 - chr3L_13_11870001 chr3L_11870001 RAL-370 1459 chr3L 11943475 11943519 chr3L 11943596 11943640 12 120 2.5 4.5 3.5 2.7 165 chr3L 11943475 3` UTR Rpt4R + chr3L 11943558 intergenic Rpt4R +,CG5883 - chr3L 11943640 3` UTR CG5883 - chr3L_12_11940001 chr3L_11940001 RAL-370 1460 chr3L 11974330 11974367 chr3L 11974430 11974467 4 100 1.5 1.5 1.5 1.6 137 chr3L 11974330 intergenic not near genes chr3L 11974398 intergenic not near genes chr3L 11974467 intergenic CG14125 + chr3L_4_11970001 chr3L_11970001 RAL-370 1461 chr3L 12052695 12052734 chr3L 12052804 12052842 18 107 3.5 5.0 4.2 3.5 147 chr3L 12052695 intron rols - chr3L 12052768 intron rols - chr3L 12052842 intron rols - chr3L_18_12050001 chr3L_12050001 RAL-370 1462 chr3L 12105960 12105984 chr3L 12106062 12106091 7 102 7.5 3.5 5.5 1.1 131 chr3L 12105960 intergenic not near genes chr3L 12106026 intergenic not near genes chr3L 12106091 intergenic not near genes chr3L_7_12105001 chr3L_12105001 RAL-370 1463 chr3L 12115727 12115769 chr3L 12115853 12115897 6 126 1.5 0.0 0.8 3.3 170 chr3L 12115727 intergenic l(3)j2D3 + chr3L 12115812 intergenic l(3)j2D3 + chr3L 12115897 intergenic l(3)j2D3 + chr3L_6_12115001 chr3L_12115001 RAL-370 1464 chr3L 10740940 10740941 chr3L 12160820 12160824 4 1419881 13.5 11.5 12.5 0.3 1419884 chr3L 10740940 intergenic not near genes chr3L 11450882 intergenic not near genes chr3L 12160824 intron CG9760 - chr3L_4_11450001 chr3L_11450001 RAL-370 1465 chr3L 12170771 12170821 chr3L 12170872 12170923 10 99 2.5 5.0 3.8 2.1 152 chr3L 12170771 intron Rh7 - chr3L 12170847 intron Rh7 - chr3L 12170923 intron Rh7 - chr3L_10_12170001 chr3L_12170001 RAL-370 1466 chr3L 12186383 12186399 chr3L 12186532 12186548 7 149 0.5 5.5 3.0 1.8 165 chr3L 12186383 intron CG6910 + chr3L 12186466 intron CG6910 + chr3L 12186548 exon CG6910 + chr3L_7_12185001 chr3L_12185001 RAL-370 1467 chr3L 12204377 12204417 chr3L 12204488 12204528 8 111 1.5 5.0 3.2 1.9 151 chr3L 12204377 3` UTR CG5626 - chr3L 12204452 intron CG5626 - chr3L 12204528 intron CG5626 - chr3L_8_12200001 chr3L_12200001 RAL-370 1468 chr3L 12219553 12219585 chr3L 12219655 12219677 9 101 4.0 9.5 6.8 1.2 124 chr3L 12219553 intron app - chr3L 12219615 intron app - chr3L 12219677 intron app - chr3L_9_12215001 chr3L_12215001 RAL-370 1469 chr3L 12231372 12231425 chr3L 12231652 12231704 16 280 37.0 36.5 36.8 0.4 332 chr3L 12231372 intron app - chr3L 12231538 intron app - chr3L 12231704 intron app - chr3L_16_12230001 chr3L_12230001 RAL-370 1470 chr3L 12304086 12304115 chr3L 12304169 12304180 11 90 4.5 3.5 4.0 2.2 94 chr3L 12304086 intergenic not near genes chr3L 12304133 intergenic not near genes chr3L 12304180 intergenic not near genes chr3L_11_12300001 chr3L_12300001 RAL-370 1471 chr3L 12366241 12366250 chr3L 12367117 12367128 5 877 30.0 32.0 31.0 0.2 887 chr3L 12366241 intergenic not near genes chr3L 12366684 intergenic not near genes chr3L 12367128 intergenic not near genes chr3L_5_12365001 chr3L_12365001 RAL-370 1472 chr3L 12366239 12366286 chr3L 12367135 12367165 6 887 38.5 29.5 34.0 0.2 926 chr3L 12366239 intergenic not near genes chr3L 12366702 intergenic not near genes chr3L 12367165 intergenic not near genes chr3L_6_12365001 chr3L_12365001 RAL-370 1473 chr3L 12369517 12369566 chr3L 12369627 12369676 18 110 2.5 4.5 3.5 4.0 159 chr3L 12369517 intron Ncc69 - chr3L 12369596 intron Ncc69 - chr3L 12369676 intron Ncc69 - chr3L_18_12365001 chr3L_12365001 RAL-370 1474 chr3L 12381523 12381539 chr3L 12381621 12381637 9 98 0.5 1.5 1.0 4.5 114 chr3L 12381523 intron Ncc69 - chr3L 12381580 intron Ncc69 - chr3L 12381637 intron Ncc69 - chr3L_9_12380001 chr3L_12380001 RAL-370 1475 chr3L 12460312 12460342 chr3L 12460409 12460438 6 96 0.5 6.5 3.5 1.3 126 chr3L 12460312 intergenic not near genes chr3L 12460375 intergenic not near genes chr3L 12460438 intergenic not near genes chr3L_6_12460001 chr3L_12460001 RAL-370 1476 chr3L 12543427 12543437 chr3L 12543515 12543545 4 98 5.0 3.0 4.0 0.8 118 chr3L 12543427 intron sowah - chr3L 12543486 intron sowah - chr3L 12543545 intron sowah - chr3L_4_12540001 chr3L_12540001 RAL-370 1477 chr3L 12543442 12543459 chr3L 12543514 12543525 4 81 3.0 2.5 2.8 1.1 83 chr3L 12543442 intron sowah - chr3L 12543484 intron sowah - chr3L 12543525 intron sowah - chr3L_4_12540001 chr3L_12540001 RAL-370 1478 chr3L 12578044 12578081 chr3L 12578152 12578184 5 107 2.0 0.0 1.0 2.5 140 chr3L 12578044 intergenic not near genes chr3L 12578114 intergenic not near genes chr3L 12578184 intergenic not near genes chr3L_5_12575001 chr3L_12575001 RAL-370 1479 chr3L 12626145 12626158 chr3L 12626274 12626287 10 129 0.0 4.5 2.2 3.1 142 chr3L 12626145 intergenic not near genes chr3L 12626216 intergenic not near genes chr3L 12626287 intergenic not near genes chr3L_10_12625001 chr3L_12625001 RAL-370 1480 chr3L 12704604 12704627 chr3L 12704723 12704771 8 126 3.0 6.0 4.5 1.5 167 chr3L 12704604 intron mirr + chr3L 12704688 intron mirr + chr3L 12704771 intron mirr + chr3L_8_12700001 chr3L_12700001 RAL-370 1481 chr3L 12808639 12808685 chr3L 12808740 12808741 14 98 4.0 2.5 3.2 3.3 102 chr3L 12808639 intron Sap130 + chr3L 12808690 intron Sap130 + chr3L 12808741 intron,5` UTR Sap130 +,CG32110 + chr3L_14_12805001 chr3L_12805001 RAL-370 1482 chr3L 12867540 12867575 chr3L 12867651 12867688 10 110 2.0 1.5 1.8 3.6 148 chr3L 12867540 intergenic not near genes chr3L 12867614 intergenic not near genes chr3L 12867688 intergenic not near genes chr3L_10_12865001 chr3L_12865001 RAL-370 1483 chr3L 12874904 12874959 chr3L 12877216 12877271 jockey 19 2309 3.5 3.0 3.2 4.5 2367 chr3L 12874904 intergenic not near genes chr3L 12876088 intergenic not near genes chr3L 12877271 intergenic not near genes chr3L_19_12875001 chr3L_12875001 RAL-370 1484 chr3L 12896228 12896267 chr3L 12896322 12896365 11 91 2.5 3.0 2.8 2.9 137 chr3L 12896228 intergenic not near genes chr3L 12896296 intergenic not near genes chr3L 12896365 intergenic not near genes chr3L_11_12895001 chr3L_12895001 RAL-370 1485 chr3L 12955108 12955160 chr3L 12955204 12955256 17 96 4.5 6.5 5.5 2.6 148 chr3L 12955108 intergenic CG10752 - chr3L 12955182 intergenic not near genes chr3L 12955256 intergenic not near genes chr3L_17_12955001 chr3L_12955001 RAL-370 1486 chr3L 12957768 12957813 chr3L 12962270 12962314 copia 18 4501 5.0 7.5 6.2 2.5 4546 chr3L 12957768 intergenic not near genes chr3L 12960041 intergenic not near genes chr3L 12962314 intergenic not near genes chr3L_18_12960001 chr3L_12960001 RAL-370 1487 chr3L 12975878 12975928 chr3L 12975974 12976026 9 97 5.0 3.5 4.2 1.7 148 chr3L 12975878 intergenic not near genes chr3L 12975952 intergenic not near genes chr3L 12976026 intergenic not near genes chr3L_9_12975001 chr3L_12975001 RAL-370 1488 chr3L 12981134 12981177 chr3L 12981247 12981290 7 106 5.5 2.0 3.8 1.5 156 chr3L 12981134 intergenic not near genes chr3L 12981212 intergenic not near genes chr3L 12981290 intergenic not near genes chr3L_7_12980001 chr3L_12980001 RAL-370 1489 chr3L 13007685 13007700 chr3L 13007784 13007799 8 99 3.5 2.5 3.0 2.0 114 chr3L 13007685 exon CG11263 + chr3L 13007742 3` UTR CG11263 + chr3L 13007799 3` UTR CG11263 + chr3L_8_13005001 chr3L_13005001 RAL-370 1490 chr3L 13056449 13056727 chr3L 13056626 13056806 8 125 0.0 0.0 0.0 8.0 357 chr3L 13056449 intergenic not near genes chr3L 13056628 intergenic not near genes chr3L 13056806 intergenic not near genes chr3L_8_13055001 chr3L_13055001 RAL-370 1491 chr3L 13069540 13069583 chr3L 13069639 13069682 15 99 3.0 2.0 2.5 4.3 142 chr3L 13069540 intergenic not near genes chr3L 13069611 intergenic not near genes chr3L 13069682 intergenic not near genes chr3L_15_13065001 chr3L_13065001 RAL-370 1492 chr3L 13085041 13085084 chr3L 13085140 13085183 15 98 1.0 5.0 3.0 3.8 142 chr3L 13085041 intergenic not near genes chr3L 13085112 intergenic not near genes chr3L 13085183 intergenic not near genes chr3L_15_13085001 chr3L_13085001 RAL-370 1493 chr3L 13132470 13132488 chr3L 13132565 13132593 6 102 4.0 7.0 5.5 0.9 123 chr3L 13132470 intergenic not near genes chr3L 13132532 intergenic not near genes chr3L 13132593 intergenic not near genes chr3L_6_13130001 chr3L_13130001 RAL-370 1494 chr3L 13159271 13159291 chr3L 13159370 13159390 7 96 3.0 0.5 1.8 2.5 119 chr3L 13159271 intergenic not near genes chr3L 13159330 intergenic not near genes chr3L 13159390 intergenic not near genes chr3L_7_13155001 chr3L_13155001 RAL-370 1495 chr3L 13207113 13207140 chr3L 13207211 13207237 8 97 4.0 4.0 4.0 1.6 124 chr3L 13207113 intergenic not near genes chr3L 13207175 intergenic not near genes chr3L 13207237 intergenic not near genes chr3L_8_13205001 chr3L_13205001 RAL-370 1496 chr3L 13208345 13208353 chr3L 13208444 13208452 8 98 10.5 0.0 5.2 1.3 107 chr3L 13208345 intergenic CR45096 - chr3L 13208398 intergenic CR45096 - chr3L 13208452 intergenic CR45096 - chr3L_8_13205001 chr3L_13205001 RAL-370 1497 chr3L 13296511 13296549 chr3L 13296621 13296660 8 111 4.5 7.5 6.0 1.1 149 chr3L 13296511 intergenic Sfp70A4 -,CR45253 + chr3L 13296586 3` UTR Sfp70A4 - chr3L 13296660 3` UTR Sfp70A4 - chr3L_8_13295001 chr3L_13295001 RAL-370 1498 chr3L 13314590 13314612 chr3L 13314683 13314715 9 101 4.0 4.5 4.2 1.7 125 chr3L 13314590 intergenic not near genes chr3L 13314652 intergenic not near genes chr3L 13314715 intergenic not near genes chr3L_9_13310001 chr3L_13310001 RAL-370 1499 chr3L 13315837 13315857 chr3L 13315943 13315947 8 104 4.5 4.0 4.2 1.5 110 chr3L 13315837 intergenic not near genes chr3L 13315892 intergenic not near genes chr3L 13315947 intergenic not near genes chr3L_8_13315001 chr3L_13315001 RAL-370 1500 chr3L 13317771 13317822 chr3L 13317881 13317932 17 109 5.5 5.0 5.2 2.7 161 chr3L 13317771 intergenic not near genes chr3L 13317852 intergenic not near genes chr3L 13317932 intergenic not near genes chr3L_17_13315001 chr3L_13315001 RAL-370 1501 chr3L 13365027 13365042 chr3L 13365125 13365140 4 98 9.0 0.0 4.5 0.7 113 chr3L 13365027 intergenic not near genes chr3L 13365084 intergenic not near genes chr3L 13365140 intergenic not near genes chr3L_4_13365001 chr3L_13365001 RAL-370 1502 chr3L 13375898 13375911 chr3L 13375998 13376011 8 100 5.0 2.0 3.5 1.8 113 chr3L 13375898 intergenic not near genes chr3L 13375954 intergenic not near genes chr3L 13376011 intergenic not near genes chr3L_8_13375001 chr3L_13375001 RAL-370 1503 chr3L 13379672 13379683 chr3L 13379862 13379873 4 190 4.0 3.5 3.8 0.8 201 chr3L 13379672 intron CG14111 + chr3L 13379772 intron CG14111 + chr3L 13379873 intron CG14111 + chr3L_4_13375001 chr3L_13375001 RAL-370 1504 chr3L 13525134 13525189 chr3L 13532950 13533001 roo 19 7812 10.0 7.5 8.8 1.9 7867 chr3L 13525134 intergenic not near genes chr3L 13529068 intergenic not near genes chr3L 13533001 intergenic not near genes chr3L_19_13525001 chr3L_13525001 RAL-370 1505 chr3L 13582223 13582231 chr3L 13582302 13582342 4 102 3.0 7.0 5.0 0.7 119 chr3L 13582223 intron bru-3 - chr3L 13582282 intron bru-3 - chr3L 13582342 intron bru-3 - chr3L_4_13580001 chr3L_13580001 RAL-370 1506 chr3L 13677511 13677558 chr3L 13677608 13677615 11 93 3.5 3.5 3.5 2.4 104 chr3L 13677511 intron bru-3 - chr3L 13677563 intron bru-3 - chr3L 13677615 intron bru-3 - chr3L_11_13675001 chr3L_13675001 RAL-370 1507 chr3L 13740013 13740052 chr3L 13740124 13740148 13 108 3.5 3.0 3.2 3.1 135 chr3L 13740013 intron bru-3 - chr3L 13740080 intron bru-3 - chr3L 13740148 intron bru-3 - chr3L_13_13740001 chr3L_13740001 RAL-370 1508 chr3L 13804538 13804570 chr3L 13822844 13822876 roo 12 18305 2.5 7.0 4.8 2.1 18338 chr3L 13804538 intergenic not near genes chr3L 13813707 intergenic not near genes chr3L 13822876 intergenic not near genes chr3L_12_13810001 chr3L_13810001 RAL-370 1509 chr3L 13841138 13841157 chr3L 13841245 13841264 6 107 4.0 6.5 5.2 1.0 126 chr3L 13841138 3` UTR CG8757 - chr3L 13841201 3` UTR CG8757 - chr3L 13841264 3` UTR CG8757 - chr3L_6_13840001 chr3L_13840001 RAL-370 1510 chr3L 13884368 13884376 chr3L 13884482 13884489 4 114 7.5 0.0 3.8 0.8 121 chr3L 13884368 intron dysc - chr3L 13884428 intron dysc - chr3L 13884489 intron dysc - chr3L_4_13880001 chr3L_13880001 RAL-370 1511 chr3L 13931347 13931365 chr3L 13931472 13931490 5 125 0.5 4.0 2.2 1.6 143 chr3L 13931347 intron Gl + chr3L 13931418 intron Gl + chr3L 13931490 intron Gl + chr3L_5_13930001 chr3L_13930001 RAL-370 1512 chr3L 13956301 13956348 chr3L 13956522 13956570 20 222 3.5 5.5 4.5 3.6 269 chr3L 13956301 intron CG32137 + chr3L 13956436 intron CG32137 + chr3L 13956570 intron CG32137 + chr3L_20_13955001 chr3L_13955001 RAL-370 1513 chr3L 14031304 14031309 chr3L 14031363 14031410 4 89 10.0 6.5 8.2 0.4 106 chr3L 14031304 intron endos - chr3L 14031357 intron endos - chr3L 14031410 5` UTR endos - chr3L_4_14030001 chr3L_14030001 RAL-370 1514 chr3L 14159428 14159442 chr3L 14159525 14159538 7 97 4.0 5.0 4.5 1.3 110 chr3L 14159428 intergenic not near genes chr3L 14159483 intergenic not near genes chr3L 14159538 intergenic not near genes chr3L_7_14155001 chr3L_14155001 RAL-370 1515 chr3L 14190214 14190265 chr3L 14190319 14190373 24 106 3.0 1.0 2.0 8.0 159 chr3L 14190214 intergenic not near genes chr3L 14190294 intergenic not near genes chr3L 14190373 intergenic nuf + chr3L_24_14190001 chr3L_14190001 RAL-370 1516 chr3L 14207837 14207875 chr3L 14207939 14207978 10 100 3.5 3.5 3.5 2.2 141 chr3L 14207837 intron nuf + chr3L 14207908 intron nuf + chr3L 14207978 intron nuf + chr3L_10_14205001 chr3L_14205001 RAL-370 1517 chr3L 14211428 14211464 chr3L 14211526 14211562 11 98 0.0 8.5 4.2 2.1 134 chr3L 14211428 intron nuf + chr3L 14211495 intron nuf + chr3L 14211562 intron nuf + chr3L_11_14210001 chr3L_14210001 RAL-370 1518 chr3L 14245552 14245594 chr3L 14245666 14245708 1360 11 111 2.0 1.5 1.8 3.9 156 chr3L 14245552 3` UTR CR44561 - chr3L 14245630 3` UTR CR44561 - chr3L 14245708 intergenic CR44561 -,CR44560 + chr3L_11_14245001 chr3L_14245001 RAL-370 1519 chr3L 14295974 14296000 chr3L 14296480 14296505 roo 6 506 3.0 3.5 3.2 1.4 531 chr3L 14295974 intron fz + chr3L 14296240 intron fz + chr3L 14296505 intron fz + chr3L_6_14295001 chr3L_14295001 RAL-370 1520 chr3L 14356506 14356551 chr3L 14356606 14356651 13 97 4.0 1.5 2.8 3.4 145 chr3L 14356506 intron fz + chr3L 14356578 intron fz + chr3L 14356651 intron fz + chr3L_13_14355001 chr3L_14355001 RAL-370 1521 chr3L 14439193 14439241 chr3L 14439375 14439424 6 182 3.5 0.5 2.0 2.0 231 chr3L 14439193 intron bbg - chr3L 14439308 intron bbg - chr3L 14439424 intron bbg - chr3L_6_14435001 chr3L_14435001 RAL-370 1522 chr3L 14468437 14468468 chr3L 14473662 14473694 copia 5 5225 6.5 2.5 4.5 0.9 5257 chr3L 14468437 intron bbg - chr3L 14471066 intron bbg - chr3L 14473694 intron bbg - chr3L_5_14470001 chr3L_14470001 RAL-370 1523 chr3L 14486000 14486034 chr3L 14486100 14486135 9 101 7.5 1.5 4.5 1.6 135 chr3L 14486000 intron bbg - chr3L 14486068 intron bbg - chr3L 14486135 intron bbg - chr3L_9_14485001 chr3L_14485001 RAL-370 1524 chr3L 14522086 14522130 chr3L 14522205 14522248 9 118 3.5 6.5 5.0 1.5 162 chr3L 14522086 intron bbg - chr3L 14522167 intron bbg - chr3L 14522248 intron bbg - chr3L_9_14520001 chr3L_14520001 RAL-370 1525 chr3L 14618386 14618421 chr3L 14618619 14618656 9 234 6.5 3.0 4.8 1.6 270 chr3L 14618386 intron shd + chr3L 14618521 intron shd + chr3L 14618656 intron shd + chr3L_9_14615001 chr3L_14615001 RAL-370 1526 chr3L 14633777 14633804 chr3L 14633893 14633920 10 116 2.0 3.5 2.8 2.6 143 chr3L 14633777 intron dlp + chr3L 14633848 intron dlp + chr3L 14633920 intron dlp + chr3L_10_14630001 chr3L_14630001 RAL-370 1527 chr3L 14714124 14714130 chr3L 14714223 14714229 4 98 10.0 4.0 7.0 0.5 105 chr3L 14714124 intron ome + chr3L 14714176 intron ome + chr3L 14714229 intron ome + chr3L_4_14710001 chr3L_14710001 RAL-370 1528 chr3L 14714133 14714142 chr3L 14714221 14714240 7 97 7.0 4.0 5.5 1.1 107 chr3L 14714133 intron ome + chr3L 14714186 intron ome + chr3L 14714240 intron ome + chr3L_7_14710001 chr3L_14710001 RAL-370 1529 chr3L 14714143 14714172 chr3L 14714220 14714228 11 93 4.5 4.0 4.2 2.1 85 chr3L 14714143 intron ome + chr3L 14714186 intron ome + chr3L 14714228 intron ome + chr3L_11_14710001 chr3L_14710001 RAL-370 1530 chr3L 14716993 14717043 chr3L 14717119 14717169 10 123 7.0 6.0 6.5 1.3 176 chr3L 14716993 intron ome + chr3L 14717081 intron ome + chr3L 14717169 intron ome + chr3L_10_14715001 chr3L_14715001 RAL-370 1531 chr3L 14721186 14721207 chr3L 14723023 14723043 Rt1c 4 1844 3.0 1.5 2.2 1.2 1857 chr3L 14721186 intron ome + chr3L 14722114 intron ome + chr3L 14723043 intron ome + chr3L_4_14720001 chr3L_14720001 RAL-370 1532 chr3L 14729508 14729545 chr3L 14729641 14729647 8 126 4.5 0.5 2.5 2.3 139 chr3L 14729508 intron ome + chr3L 14729578 intron ome + chr3L 14729647 intron ome + chr3L_8_14725001 chr3L_14725001 RAL-370 1533 chr3L 14839019 14839051 chr3L 14839128 14839160 6 108 1.0 5.5 3.2 1.4 141 chr3L 14839019 intron CG17839 + chr3L 14839090 intron CG17839 + chr3L 14839160 intron CG17839 + chr3L_6_14835001 chr3L_14835001 RAL-370 1534 chr3L 14870039 14870066 chr3L 14870135 14870162 5 96 4.5 5.0 4.8 0.9 123 chr3L 14870039 intron CG17839 + chr3L 14870100 intron CG17839 + chr3L 14870162 intron CG17839 + chr3L_5_14870001 chr3L_14870001 RAL-370 1535 chr3L 14917646 14917693 chr3L 14917749 14917776 13 101 4.0 2.5 3.2 3.1 130 chr3L 14917646 intron DCX-EMAP + chr3L 14917711 intron DCX-EMAP + chr3L 14917776 intron DCX-EMAP + chr3L_13_14915001 chr3L_14915001 RAL-370 1536 chr3L 14922085 14922134 chr3L 14922212 14922234 8 120 4.0 1.5 2.8 2.1 149 chr3L 14922085 intron DCX-EMAP + chr3L 14922160 intron DCX-EMAP + chr3L 14922234 intron DCX-EMAP + chr3L_8_14920001 chr3L_14920001 RAL-370 1537 chr3L 14954214 14954399 chr3L 14956051 14956088 transib2 4 1800 0.0 3.5 1.8 1.4 1874 chr3L 14954214 intergenic not near genes chr3L 14955151 intergenic not near genes chr3L 14956088 intergenic not near genes chr3L_4_14955001 chr3L_14955001 RAL-370 1538 chr3L 14958407 14958458 chr3L 14958510 14958561 17 101 2.0 5.5 3.8 3.5 154 chr3L 14958407 intergenic not near genes chr3L 14958484 intergenic not near genes chr3L 14958561 intergenic not near genes chr3L_17_14955001 chr3L_14955001 RAL-370 1539 chr3L 15085029 15085049 chr3L 15086215 15086235 1360 4 1185 6.0 6.5 6.2 0.6 1206 chr3L 15085029 intron cp309 - chr3L 15085632 intron cp309 - chr3L 15086235 intron cp309 - chr3L_4_15085001 chr3L_15085001 RAL-370 1540 chr3L 15193675 15193711 chr3L 15193863 15193900 12 188 7.5 5.0 6.2 1.7 225 chr3L 15193675 intergenic not near genes chr3L 15193788 intergenic not near genes chr3L 15193900 intergenic not near genes chr3L_12_15190001 chr3L_15190001 RAL-370 1541 chr3L 15209048 15209090 chr3L 15209154 15209195 11 105 4.0 2.5 3.2 2.6 147 chr3L 15209048 intergenic CG6888 + chr3L 15209122 intergenic not near genes chr3L 15209195 intergenic not near genes chr3L_11_15205001 chr3L_15205001 RAL-370 1542 chr3L 15257419 15257445 chr3L 15257652 15257678 5 233 2.5 2.5 2.5 1.4 259 chr3L 15257419 intergenic not near genes chr3L 15257548 intergenic not near genes chr3L 15257678 intergenic not near genes chr3L_5_15255001 chr3L_15255001 RAL-370 1543 chr3L 15295747 15295801 chr3L 15298609 15298663 gypsy5 12 2863 3.0 3.0 3.0 3.0 2916 chr3L 15295747 intergenic not near genes chr3L 15297205 intergenic not near genes chr3L 15298663 intergenic Best4 + chr3L_12_15295001 chr3L_15295001 RAL-370 1544 chr3L 15321836 15321849 chr3L 15321936 15321949 5 100 4.5 3.0 3.8 1.0 113 chr3L 15321836 intergenic not near genes chr3L 15321892 intergenic not near genes chr3L 15321949 intergenic not near genes chr3L_5_15320001 chr3L_15320001 RAL-370 1545 chr3L 15349595 15349641 chr3L 15349844 15349890 7 243 2.0 2.5 2.2 2.2 295 chr3L 15349595 intergenic not near genes chr3L 15349742 intergenic not near genes chr3L 15349890 intergenic not near genes chr3L_7_15345001 chr3L_15345001 RAL-370 1546 chr3L 15366666 15366677 chr3L 15366799 15366808 4 132 3.5 6.0 4.8 0.7 142 chr3L 15366666 intergenic not near genes chr3L 15366737 intergenic not near genes chr3L 15366808 intergenic not near genes chr3L_4_15365001 chr3L_15365001 RAL-370 1547 chr3L 15366680 15366693 chr3L 15366790 15366826 6 128 2.5 5.5 4.0 1.2 146 chr3L 15366680 intergenic not near genes chr3L 15366753 intergenic not near genes chr3L 15366826 intergenic not near genes chr3L_6_15365001 chr3L_15365001 RAL-370 1548 chr3L 15400802 15400845 chr3L 15400948 15400991 8 146 2.5 5.0 3.8 1.7 189 chr3L 15400802 intergenic not near genes chr3L 15400896 intergenic not near genes chr3L 15400991 intergenic not near genes chr3L_8_15400001 chr3L_15400001 RAL-370 1549 chr3L 15406946 15406957 chr3L 15407560 15407577 5 619 4.5 3.0 3.8 1.0 631 chr3L 15406946 intergenic not near genes chr3L 15407262 intergenic not near genes chr3L 15407577 intergenic CG33259 + chr3L_5_15405001 chr3L_15405001 RAL-370 1550 chr3L 15418062 15418069 chr3L 15418127 15418173 8 98 4.5 3.0 3.8 1.7 111 chr3L 15418062 intergenic not near genes chr3L 15418118 intergenic not near genes chr3L 15418173 intergenic not near genes chr3L_8_15415001 chr3L_15415001 RAL-370 1551 chr3L 15418490 15418525 chr3L 15418587 15418631 9 101 4.0 4.5 4.2 1.7 141 chr3L 15418490 intergenic not near genes chr3L 15418560 intergenic not near genes chr3L 15418631 intergenic not near genes chr3L_9_15415001 chr3L_15415001 RAL-370 1552 chr3L 15423754 15423774 chr3L 15426618 15426638 opus 4 2864 3.0 3.0 3.0 1.0 2884 chr3L 15423754 intergenic not near genes chr3L 15425196 intergenic not near genes chr3L 15426638 intergenic not near genes chr3L_4_15425001 chr3L_15425001 RAL-370 1553 chr3L 15444633 15444681 chr3L 15444744 15444764 16 106 5.5 3.5 4.5 2.9 131 chr3L 15444633 intergenic not near genes chr3L 15444698 intergenic not near genes chr3L 15444764 intergenic not near genes chr3L_16_15440001 chr3L_15440001 RAL-370 1554 chr3L 15466850 15466900 chr3L 15468202 15468253 9 1347 5.0 20.0 12.5 0.7 1403 chr3L 15466850 intergenic not near genes chr3L 15467552 intergenic not near genes chr3L 15468253 intergenic not near genes chr3L_9_15465001 chr3L_15465001 RAL-370 1555 chr3L 15466928 15466937 chr3L 15468314 15468357 9 1391 7.0 20.5 13.8 0.6 1429 chr3L 15466928 intergenic not near genes chr3L 15467642 intergenic not near genes chr3L 15468357 intergenic not near genes chr3L_9_15465001 chr3L_15465001 RAL-370 1556 chr3L 15541606 15541642 chr3L 15541707 15541753 6 109 5.5 1.5 3.5 1.3 147 chr3L 15541606 intron CrebA + chr3L 15541680 intron CrebA + chr3L 15541753 intron CrebA + chr3L_6_15540001 chr3L_15540001 RAL-370 1557 chr3L 15600178 15600197 chr3L 15600299 15600318 4 120 7.0 2.5 4.8 0.7 140 chr3L 15600178 intron RhoGAP71E + chr3L 15600248 intron RhoGAP71E + chr3L 15600318 intron RhoGAP71E + chr3L_4_15600001 chr3L_15600001 RAL-370 1558 chr3L 15617776 15617806 chr3L 15617986 15618021 5 213 1.5 2.0 1.8 1.8 245 chr3L 15617776 intron comm3 - chr3L 15617898 intron comm3 - chr3L 15618021 intron comm3 - chr3L_5_15615001 chr3L_15615001 RAL-370 1559 chr3L 15629879 15629908 chr3L 15630023 15630052 7 144 4.0 2.0 3.0 1.8 173 chr3L 15629879 intron comm3 - chr3L 15629966 intron comm3 - chr3L 15630052 intron comm3 - chr3L_7_15625001 chr3L_15625001 RAL-370 1560 chr3L 15641788 15641807 chr3L 15641893 15641912 5 105 0.0 5.0 2.5 1.4 124 chr3L 15641788 intron comm3 - chr3L 15641850 intron comm3 - chr3L 15641912 intron comm3 - chr3L_5_15640001 chr3L_15640001 RAL-370 1561 chr3L 15691393 15691439 chr3L 15691495 15691541 6 91 0.0 4.0 2.0 2.0 148 chr3L 15691393 intron CG34451 - chr3L 15691467 intron CG34451 - chr3L 15691541 intron CG34451 - chr3L_6_15690001 chr3L_15690001 RAL-370 1562 chr3L 15695957 15696010 chr3L 15696054 15696108 19 95 4.5 4.5 4.5 3.5 151 chr3L 15695957 intergenic not near genes chr3L 15696032 intergenic not near genes chr3L 15696108 intergenic not near genes chr3L_19_15695001 chr3L_15695001 RAL-370 1563 chr3L 15744586 15744608 chr3L 15745041 15745062 11 456 30.5 23.0 26.8 0.4 476 chr3L 15744586 intergenic not near genes chr3L 15744824 intergenic not near genes chr3L 15745062 intergenic not near genes chr3L_11_15740001 chr3L_15740001 RAL-370 1564 chr3L 15833809 15833848 chr3L 15834028 15834067 9 220 18.0 17.0 17.5 0.5 258 chr3L 15833809 3` UTR,3` UTR CG12713 +,CG18081 - chr3L 15833938 3` UTR,3` UTR CG12713 +,CG18081 - chr3L 15834067 3` UTR CG18081 - chr3L_9_15830001 chr3L_15830001 RAL-370 1565 chr3L 15834971 15834999 chr3L 15835146 15835172 9 170 6.0 4.5 5.2 1.5 201 chr3L 15834971 intron CG18081 - chr3L 15835072 intron CG18081 - chr3L 15835172 intron CG18081 - chr3L_9_15835001 chr3L_15835001 RAL-370 1566 chr3L 15871577 15871612 chr3L 15871681 15871715 7 104 7.0 4.0 5.5 1.1 138 chr3L 15871577 intron pHCl - chr3L 15871646 intron pHCl - chr3L 15871715 intron pHCl - chr3L_7_15870001 chr3L_15870001 RAL-370 1567 chr3L 15883174 15883223 chr3L 15883487 15883533 17 309 2.5 3.5 3.0 4.2 359 chr3L 15883174 intron pHCl - chr3L 15883354 intron pHCl - chr3L 15883533 intron pHCl - chr3L_17_15880001 chr3L_15880001 RAL-370 1568 chr3L 15929175 15929229 chr3L 15938342 15938389 roo 15 9167 1.5 4.0 2.8 3.9 9214 chr3L 15929175 intron Pka-C3 - chr3L 15933782 intron Pka-C3 - chr3L 15938389 intron Pka-C3 - chr3L_15_15930001 chr3L_15930001 RAL-370 1569 chr3L 15941600 15941643 chr3L 15941697 15941740 16 95 4.0 3.0 3.5 3.6 140 chr3L 15941600 intron Pka-C3 - chr3L 15941670 intron Pka-C3 - chr3L 15941740 intron Pka-C3 - chr3L_16_15940001 chr3L_15940001 RAL-370 1570 chr3L 15946483 15946537 chr3L 15946589 15946643 5 106 4.5 0.0 2.2 1.6 160 chr3L 15946483 intron Pka-C3 - chr3L 15946563 intron Pka-C3 - chr3L 15946643 intron Pka-C3 - chr3L_5_15945001 chr3L_15945001 RAL-370 1571 chr3L 15966532 15966563 chr3L 15968901 15968932 10 2371 31.0 44.5 37.8 0.3 2400 chr3L 15966532 exon l(3)72Ab - chr3L 15967732 exon l(3)72Ab - chr3L 15968932 intron CG10516 + chr3L_10_15965001 chr3L_15965001 RAL-370 1572 chr3L 15966524 15966566 chr3L 15968933 15968948 5 2381 31.5 38.5 35.0 0.1 2424 chr3L 15966524 exon l(3)72Ab - chr3L 15967736 exon l(3)72Ab - chr3L 15968948 intron CG10516 + chr3L_5_15965001 chr3L_15965001 RAL-370 1573 chr3L 16162594 16162610 chr3L 16162698 16162714 8 102 4.0 6.5 5.2 1.3 120 chr3L 16162594 intron CG5151 - chr3L 16162654 intron CG5151 - chr3L 16162714 intron CG5151 - chr3L_8_16160001 chr3L_16160001 RAL-370 1574 chr3L 16182060 16182093 chr3L 16182187 16182233 10 138 0.5 4.0 2.2 3.1 173 chr3L 16182060 intergenic not near genes chr3L 16182146 intergenic not near genes chr3L 16182233 intergenic not near genes chr3L_10_16180001 chr3L_16180001 RAL-370 1575 chr3L 16184068 16184115 chr3L 16188932 16188979 X-element 11 4864 2.0 4.0 3.0 2.8 4911 chr3L 16184068 intergenic not near genes chr3L 16186524 intergenic not near genes chr3L 16188979 intergenic not near genes chr3L_11_16185001 chr3L_16185001 RAL-370 1576 chr3L 16212801 16212840 chr3L 16212912 16212951 8 111 1.5 0.5 1.0 4.0 150 chr3L 16212801 intergenic CG13073 - chr3L 16212876 intergenic CG13073 - chr3L 16212951 intergenic CG13073 - chr3L_8_16210001 chr3L_16210001 RAL-370 1577 chr3L 16236325 16236366 chr3L 16236460 16236501 11 132 2.5 2.0 2.2 3.4 176 chr3L 16236325 3` UTR l(3)72Dp + chr3L 16236413 3` UTR l(3)72Dp + chr3L 16236501 3` UTR l(3)72Dp + chr3L_11_16235001 chr3L_16235001 RAL-370 1578 chr3L 16322805 16322825 chr3L 16322915 16322935 8 109 9.5 3.5 6.5 1.1 130 chr3L 16322805 intergenic not near genes chr3L 16322870 intergenic not near genes chr3L 16322935 intergenic not near genes chr3L_8_16320001 chr3L_16320001 RAL-370 1579 chr3L 16322831 16322856 chr3L 16322912 16322965 8 106 5.0 3.0 4.0 1.6 134 chr3L 16322831 intergenic not near genes chr3L 16322898 intergenic not near genes chr3L 16322965 intergenic not near genes chr3L_8_16320001 chr3L_16320001 RAL-370 1580 chr3L 16437049 16437100 chr3L 16437148 16437206 8 105 3.5 0.0 1.8 2.9 157 chr3L 16437049 intron,intron CG33158 +,dsx-c73A - chr3L 16437128 intron,intron CG33158 +,dsx-c73A - chr3L 16437206 intron,intron CG33158 +,dsx-c73A - chr3L_8_16435001 chr3L_16435001 RAL-370 1581 chr3L 16443830 16443870 chr3L 16446190 16446229 Doc 19 2359 3.0 6.5 4.8 3.3 2399 chr3L 16443830 intron,intron CG33158 +,dsx-c73A - chr3L 16445030 intron,intron CG33158 +,dsx-c73A - chr3L 16446229 intron,intron CG33158 +,dsx-c73A - chr3L_19_16445001 chr3L_16445001 RAL-370 1582 chr3L 16457507 16457540 chr3L 16457623 16457655 7 113 5.0 1.5 3.2 1.7 148 chr3L 16457507 intron CG33158 + chr3L 16457581 intron CG33158 + chr3L 16457655 intron CG33158 + chr3L_7_16455001 chr3L_16455001 RAL-370 1583 chr3L 16462714 16462765 chr3L 16462827 16462869 11 112 1.0 1.5 1.2 5.0 155 chr3L 16462714 intron CG33158 + chr3L 16462792 intron CG33158 + chr3L 16462869 intron CG33158 + chr3L_11_16460001 chr3L_16460001 RAL-370 1584 chr3L 16493961 16493990 chr3L 16494496 16494524 jockey 15 536 8.5 7.5 8.0 1.7 563 chr3L 16493961 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494242 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494524 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_15_16490001 chr3L_16490001 RAL-370 1585 chr3L 16493991 16494005 chr3L 16494493 16494511 jockey 9 528 6.0 7.5 6.8 1.2 520 chr3L 16493991 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494251 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L 16494511 intron,intron,intron CG33158 +,CG42514 -,CG43373 - chr3L_9_16490001 chr3L_16490001 RAL-370 1586 chr3L 16503626 16503652 chr3L 16503723 16503749 6 95 1.5 3.5 2.5 1.7 123 chr3L 16503626 intron CG43373 - chr3L 16503688 intron CG43373 - chr3L 16503749 intron CG43373 - chr3L_6_16500001 chr3L_16500001 RAL-370 1587 chr3L 16533545 16533587 chr3L 16533675 16533717 5 130 2.5 2.5 2.5 1.4 172 chr3L 16533545 intron CG43373 - chr3L 16533631 intron CG43373 - chr3L 16533717 intron CG43373 - chr3L_5_16530001 chr3L_16530001 RAL-370 1588 chr3L 16537834 16537879 chr3L 16537941 16537986 6 106 1.5 4.5 3.0 1.5 152 chr3L 16537834 intron CG43373 - chr3L 16537910 intron CG43373 - chr3L 16537986 intron CG43373 - chr3L_6_16535001 chr3L_16535001 RAL-370 1589 chr3L 16540034 16540082 chr3L 16540141 16540152 14 105 4.0 2.0 3.0 3.5 118 chr3L 16540034 intron CG43373 - chr3L 16540093 intron CG43373 - chr3L 16540152 intron CG43373 - chr3L_14_16540001 chr3L_16540001 RAL-370 1590 chr3L 16560290 16560336 chr3L 16560395 16560428 9 103 4.0 5.0 4.5 1.6 138 chr3L 16560290 intergenic not near genes chr3L 16560359 intergenic not near genes chr3L 16560428 intergenic not near genes chr3L_9_16560001 chr3L_16560001 RAL-370 1591 chr3L 16561095 16561141 chr3L 16561190 16561199 13 82 3.0 4.0 3.5 2.9 104 chr3L 16561095 intergenic not near genes chr3L 16561147 intergenic not near genes chr3L 16561199 intergenic not near genes chr3L_13_16560001 chr3L_16560001 RAL-370 1592 chr3L 16563211 16563231 chr3L 16563312 16563331 4 100 2.0 0.0 1.0 2.0 120 chr3L 16563211 intergenic Mipp1 - chr3L 16563271 intergenic Mipp1 - chr3L 16563331 intergenic Mipp1 - chr3L_4_16560001 chr3L_16560001 RAL-370 1593 chr3L 16616488 16616537 chr3L 16621836 16621884 297 12 5347 6.5 4.5 5.5 1.8 5396 chr3L 16616488 3` UTR Abl - chr3L 16619186 3` UTR Abl - chr3L 16621884 3` UTR Abl - chr3L_12_16615001 chr3L_16615001 RAL-370 1594 chr3L 16652662 16652714 chr3L 16652761 16652812 20 96 5.5 4.5 5.0 3.3 150 chr3L 16652662 intron Baldspot - chr3L 16652737 intron Baldspot - chr3L 16652812 intron Baldspot - chr3L_20_16650001 chr3L_16650001 RAL-370 1595 chr3L 16684010 16684043 chr3L 16689245 16689284 copia 9 5240 2.5 1.5 2.0 3.0 5274 chr3L 16684010 intron,intron Lasp -,CG43954 - chr3L 16686647 intron,intron Lasp -,CG43954 - chr3L 16689284 intron,intron,5` UTR Lasp -,CG43954 -,CR45179 + chr3L_9_16685001 chr3L_16685001 RAL-370 1596 chr3L 16757633 16757668 chr3L 16757742 16757778 8 110 3.0 6.5 4.8 1.4 145 chr3L 16757633 intergenic not near genes chr3L 16757706 intergenic not near genes chr3L 16757778 intergenic not near genes chr3L_8_16755001 chr3L_16755001 RAL-370 1597 chr3L 16764587 16764610 chr3L 16764706 16764737 7 125 4.5 3.5 4.0 1.4 150 chr3L 16764587 intergenic not near genes chr3L 16764662 intergenic not near genes chr3L 16764737 intergenic not near genes chr3L_7_16760001 chr3L_16760001 RAL-370 1598 chr3L 16800567 16800613 chr3L 16800720 16800761 12 152 4.0 2.5 3.2 2.9 194 chr3L 16800567 intron CG9674 - chr3L 16800664 intron CG9674 - chr3L 16800761 intron CG9674 - chr3L_12_16800001 chr3L_16800001 RAL-370 1599 chr3L 16808024 16808056 chr3L 16808120 16808143 7 94 3.5 1.5 2.5 2.0 119 chr3L 16808024 intron nudC + chr3L 16808084 intron nudC + chr3L 16808143 intron nudC + chr3L_7_16805001 chr3L_16805001 RAL-370 1600 chr3L 16815831 16815887 chr3L 16815937 16815990 10 105 0.0 2.0 1.0 5.0 159 chr3L 16815831 intron,intron nudC +,CG13024 - chr3L 16815910 intron,intron nudC +,CG13024 - chr3L 16815990 intron,intron nudC +,CG13024 - chr3L_10_16815001 chr3L_16815001 RAL-370 1601 chr3L 16817856 16817897 chr3L 16818015 16818043 8 153 2.5 4.5 3.5 1.8 187 chr3L 16817856 intron,intron nudC +,CG13024 - chr3L 16817950 intron,intron nudC +,CG13024 - chr3L 16818043 intron,intron nudC +,CG13024 - chr3L_8_16815001 chr3L_16815001 RAL-370 1602 chr3L 16817899 16817901 chr3L 16818014 16818029 5 143 2.5 4.5 3.5 1.1 130 chr3L 16817899 intron,intron nudC +,CG13024 - chr3L 16817964 intron,intron nudC +,CG13024 - chr3L 16818029 intron,intron nudC +,CG13024 - chr3L_5_16815001 chr3L_16815001 RAL-370 1603 chr3L 16821274 16821287 chr3L 16821380 16821392 5 105 7.5 2.5 5.0 0.8 118 chr3L 16821274 intron CG13024 - chr3L 16821333 intron CG13024 - chr3L 16821392 intron CG13024 - chr3L_5_16820001 chr3L_16820001 RAL-370 1604 chr3L 16836297 16836340 chr3L 16836408 16836452 4 112 5.5 0.0 2.8 1.1 155 chr3L 16836297 intergenic not near genes chr3L 16836374 intergenic not near genes chr3L 16836452 intergenic not near genes chr3L_4_16835001 chr3L_16835001 RAL-370 1605 chr3L 16845007 16845025 chr3L 16845139 16845158 6 131 3.0 3.5 3.2 1.4 151 chr3L 16845007 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845082 intergenic CG9669 -,CG9715 +,TSG101 + chr3L 16845158 intergenic CG9669 -,CG9715 + chr3L_6_16845001 chr3L_16845001 RAL-370 1606 chr3L 16869563 16869602 chr3L 16869665 16869705 15 103 5.0 3.5 4.2 2.9 142 chr3L 16869563 intron Lmpt + chr3L 16869634 intron Lmpt + chr3L 16869705 intron Lmpt + chr3L_15_16865001 chr3L_16865001 RAL-370 1607 chr3L 16870844 16870887 chr3L 16870956 16870998 8 111 1.5 0.5 1.0 4.0 154 chr3L 16870844 intron Lmpt + chr3L 16870921 intron Lmpt + chr3L 16870998 intron Lmpt + chr3L_8_16870001 chr3L_16870001 RAL-370 1608 chr3L 16873332 16873358 chr3L 16873444 16873477 4 120 5.5 5.0 5.2 0.6 145 chr3L 16873332 intron Lmpt + chr3L 16873404 intron Lmpt + chr3L 16873477 intron Lmpt + chr3L_4_16870001 chr3L_16870001 RAL-370 1609 chr3L 16887467 16887516 chr3L 16887593 16887645 11 123 0.0 4.0 2.0 3.7 178 chr3L 16887467 intron Lmpt + chr3L 16887556 intron Lmpt + chr3L 16887645 intron Lmpt + chr3L_11_16885001 chr3L_16885001 RAL-370 1610 chr3L 16945724 16945760 chr3L 16954882 16954896 roo 4 9139 3.0 4.5 3.8 0.8 9172 chr3L 16945724 exon Obp73a + chr3L 16950310 intergenic not near genes chr3L 16954896 5` UTR Nc73EF + chr3L_4_16950001 chr3L_16950001 RAL-370 1611 chr3L 16973737 16973741 chr3L 16973796 16973838 6 75 2.5 2.5 2.5 1.7 101 chr3L 16973737 intron Exn + chr3L 16973788 intron Exn + chr3L 16973838 intron Exn + chr3L_6_16970001 chr3L_16970001 RAL-370 1612 chr3L 17026768 17026823 chr3L 17026869 17026924 17 93 5.5 3.5 4.5 3.1 156 chr3L 17026768 exon Fit2 + chr3L 17026846 3` UTR Fit2 + chr3L 17026924 3` UTR Fit2 + chr3L_17_17025001 chr3L_17025001 RAL-370 1613 chr3L 17034921 17034961 chr3L 17035129 17035168 G2 6 208 1.0 4.5 2.8 1.6 247 chr3L 17034921 intergenic not near genes chr3L 17035044 intergenic not near genes chr3L 17035168 intergenic beg + chr3L_6_17035001 chr3L_17035001 RAL-370 1614 chr3L 17084989 17085030 chr3L 17094158 17094199 roo 12 9169 7.5 6.0 6.8 1.5 9210 chr3L 17084989 intron Rbp6 - chr3L 17089594 intron Rbp6 - chr3L 17094199 intron Rbp6 - chr3L_12_17085001 chr3L_17085001 RAL-370 1615 chr3L 17110332 17110343 chr3L 17110390 17110441 7 87 6.0 3.5 4.8 1.2 109 chr3L 17110332 intron Rbp6 - chr3L 17110386 intron Rbp6 - chr3L 17110441 intron Rbp6 - chr3L_7_17110001 chr3L_17110001 RAL-370 1616 chr3L 17113094 17113137 chr3L 17113286 17113334 7 190 2.5 4.0 3.2 1.7 240 chr3L 17113094 intron Rbp6 - chr3L 17113214 intron Rbp6 - chr3L 17113334 intron Rbp6 - chr3L_7_17110001 chr3L_17110001 RAL-370 1617 chr3L 17120634 17120928 chr3L 17120729 17121017 28 92 7.0 4.5 5.8 4.1 383 chr3L 17120634 intron Rbp6 - chr3L 17120826 intron Rbp6 - chr3L 17121017 intron Rbp6 - chr3L_28_17120001 chr3L_17120001 RAL-370 1618 chr3L 17203173 17203220 chr3L 17203290 17203336 10 116 1.5 6.5 4.0 2.0 163 chr3L 17203173 intron Rbp6 - chr3L 17203254 intron Rbp6 - chr3L 17203336 intron Rbp6 - chr3L_10_17200001 chr3L_17200001 RAL-370 1619 chr3L 17272224 17272248 chr3L 17272377 17272401 6 153 1.0 4.5 2.8 1.6 177 chr3L 17272224 intergenic not near genes chr3L 17272312 intergenic not near genes chr3L 17272401 intergenic not near genes chr3L_6_17270001 chr3L_17270001 RAL-370 1620 chr3L 17310049 17310088 chr3L 17310161 17310197 7 110 0.0 2.0 1.0 3.5 148 chr3L 17310049 intergenic not near genes chr3L 17310123 intergenic not near genes chr3L 17310197 intergenic not near genes chr3L_7_17310001 chr3L_17310001 RAL-370 1621 chr3L 17321710 17321739 chr3L 17321799 17321839 10 96 5.0 4.0 4.5 1.8 129 chr3L 17321710 intergenic not near genes chr3L 17321774 intergenic not near genes chr3L 17321839 intergenic not near genes chr3L_10_17320001 chr3L_17320001 RAL-370 1622 chr3L 17367418 17367460 chr3L 17367532 17367574 13 114 4.0 3.0 3.5 2.9 156 chr3L 17367418 intergenic CR45688 +,Cad74A - chr3L 17367496 intergenic CR45688 +,Cad74A - chr3L 17367574 intergenic Cad74A -,CR45688 + chr3L_13_17365001 chr3L_17365001 RAL-370 1623 chr3L 17408896 17408921 chr3L 17408991 17409017 6 96 5.5 1.0 3.2 1.4 121 chr3L 17408896 intron blot - chr3L 17408956 intron blot - chr3L 17409017 intron blot - chr3L_6_17405001 chr3L_17405001 RAL-370 1624 chr3L 17510726 17510738 chr3L 17510830 17510842 4 104 5.5 3.0 4.2 0.8 116 chr3L 17510726 exon Oatp74D + chr3L 17510784 intron Oatp74D + chr3L 17510842 intron Oatp74D + chr3L_4_17510001 chr3L_17510001 RAL-370 1625 chr3L 17510739 17510759 chr3L 17510828 17510862 7 101 2.5 3.0 2.8 1.8 123 chr3L 17510739 exon Oatp74D + chr3L 17510800 intron Oatp74D + chr3L 17510862 intron Oatp74D + chr3L_7_17510001 chr3L_17510001 RAL-370 1626 chr3L 17516982 17516993 chr3L 17524559 17524571 412 5 7577 7.5 5.0 6.2 0.7 7589 chr3L 17516982 intron CG7564 + chr3L 17520776 intron CG7564 + chr3L 17524571 3` UTR CG7564 + chr3L_5_17520001 chr3L_17520001 RAL-370 1627 chr3L 17516996 17517011 chr3L 17524544 17524546 412 4 7554 5.0 3.0 4.0 0.8 7550 chr3L 17516996 intron CG7564 + chr3L 17520771 intron CG7564 + chr3L 17524546 3` UTR CG7564 + chr3L_4_17520001 chr3L_17520001 RAL-370 1628 chr3L 17535802 17535840 chr3L 17535935 17535971 8 130 2.5 6.5 4.5 1.5 169 chr3L 17535802 intron Nedd4 + chr3L 17535886 intron Nedd4 + chr3L 17535971 intron Nedd4 + chr3L_8_17535001 chr3L_17535001 RAL-370 1629 chr3L 17580568 17580607 chr3L 17580761 17580786 15 193 7.0 0.5 3.8 3.1 218 chr3L 17580568 intron Eip74EF - chr3L 17580677 intron Eip74EF - chr3L 17580786 intron Eip74EF - chr3L_15_17580001 chr3L_17580001 RAL-370 1630 chr3L 17592789 17592821 chr3L 17592899 17592932 7 110 0.0 4.0 2.0 2.3 143 chr3L 17592789 intron Eip74EF - chr3L 17592860 intron Eip74EF - chr3L 17592932 intron Eip74EF - chr3L_7_17590001 chr3L_17590001 RAL-370 1631 chr3L 17730830 17730874 chr3L 17738180 17738222 mdg1 10 7350 4.0 3.0 3.5 2.2 7392 chr3L 17730830 intron Ccn + chr3L 17734526 intron Ccn + chr3L 17738222 intron Ccn + chr3L_10_17730001 chr3L_17730001 RAL-370 1632 chr3L 17744502 17744551 chr3L 17744907 17744955 14 403 4.5 5.0 4.8 2.4 453 chr3L 17744502 intron Ccn + chr3L 17744728 intron Ccn + chr3L 17744955 intron Ccn + chr3L_14_17740001 chr3L_17740001 RAL-370 1633 chr3L 17753332 17753356 chr3L 17753438 17753462 11 105 6.0 6.5 6.2 1.5 130 chr3L 17753332 intron Adgf-A - chr3L 17753397 intron Adgf-A - chr3L 17753462 intron Adgf-A - chr3L_11_17750001 chr3L_17750001 RAL-370 1634 chr3L 17787669 17787694 chr3L 17787776 17787807 6 112 10.0 5.0 7.5 0.7 138 chr3L 17787669 intergenic not near genes chr3L 17787738 intergenic not near genes chr3L 17787807 intergenic not near genes chr3L_6_17785001 chr3L_17785001 RAL-370 1635 chr3L 17789830 17789877 chr3L 17789926 17789969 6 95 3.0 2.0 2.5 1.7 139 chr3L 17789830 intergenic not near genes chr3L 17789900 intergenic not near genes chr3L 17789969 intergenic not near genes chr3L_6_17785001 chr3L_17785001 RAL-370 1636 chr3L 17790586 17790636 chr3L 17790868 17790901 12 282 4.5 2.5 3.5 2.7 315 chr3L 17790586 intergenic CG42815 - chr3L 17790744 intergenic CG42815 - chr3L 17790901 intergenic CG42815 - chr3L_12_17790001 chr3L_17790001 RAL-370 1637 chr3L 17799792 17799828 chr3L 17801598 17801635 S-element 7 1807 4.0 1.5 2.8 1.8 1843 chr3L 17799792 intron NUCB1 - chr3L 17800714 intron NUCB1 - chr3L 17801635 intron NUCB1 - chr3L_7_17800001 chr3L_17800001 RAL-370 1638 chr3L 17834314 17834354 chr3L 17834498 17834538 5 182 0.0 2.5 1.2 2.3 224 chr3L 17834314 intron Grd + chr3L 17834426 intron Grd + chr3L 17834538 intron Grd + chr3L_5_17830001 chr3L_17830001 RAL-370 1639 chr3L 17837606 17837643 chr3L 17837714 17837751 13 105 1.0 3.5 2.2 4.1 145 chr3L 17837606 exon Grd + chr3L 17837678 intron Grd + chr3L 17837751 exon Grd + chr3L_13_17835001 chr3L_17835001 RAL-370 1640 chr3L 17918359 17918403 chr3L 17921182 17921224 opus 5 2822 3.5 2.0 2.8 1.3 2865 chr3L 17918359 intergenic not near genes chr3L 17919792 intergenic not near genes chr3L 17921224 intergenic not near genes chr3L_5_17915001 chr3L_17915001 RAL-370 1641 chr3L 17965479 17965502 chr3L 17965624 17965643 5 140 1.5 6.5 4.0 1.0 164 chr3L 17965479 intron Eip75B - chr3L 17965561 intron Eip75B - chr3L 17965643 intron Eip75B - chr3L_5_17965001 chr3L_17965001 RAL-370 1642 chr3L 17991563 17991588 chr3L 17991661 17991686 9 97 5.5 5.5 5.5 1.4 123 chr3L 17991563 intron Eip75B - chr3L 17991624 intron Eip75B - chr3L 17991686 intron Eip75B - chr3L_9_17990001 chr3L_17990001 RAL-370 1643 chr3L 18000653 18000707 chr3L 18000750 18000794 14 96 5.0 5.0 5.0 2.3 141 chr3L 18000653 intron Eip75B - chr3L 18000724 intron Eip75B - chr3L 18000794 intron Eip75B - chr3L_14_18000001 chr3L_18000001 RAL-370 1644 chr3L 18047690 18047739 chr3L 18056766 18056816 roo 6 9076 1.0 1.0 1.0 3.0 9126 chr3L 18047690 intron Eip75B - chr3L 18052253 intron Eip75B - chr3L 18056816 intron Eip75B - chr3L_6_18050001 chr3L_18050001 RAL-370 1645 chr3L 18092762 18092796 chr3L 18092897 18092926 10 134 7.5 0.0 3.8 2.1 164 chr3L 18092762 intron CG13698 - chr3L 18092844 intron CG13698 - chr3L 18092926 intron CG13698 - chr3L_10_18090001 chr3L_18090001 RAL-370 1646 chr3L 18119616 18119677 chr3L 18119748 18119795 7 122 0.0 4.5 2.2 2.2 179 chr3L 18119616 intron CG7341 + chr3L 18119706 intron CG7341 + chr3L 18119795 5` UTR CG7341 + chr3L_7_18115001 chr3L_18115001 RAL-370 1647 chr3L 18124414 18124421 chr3L 18124518 18124524 4 104 2.0 6.0 4.0 0.8 110 chr3L 18124414 intergenic not near genes chr3L 18124469 intergenic not near genes chr3L 18124524 intergenic not near genes chr3L_4_18120001 chr3L_18120001 RAL-370 1648 chr3L 18172676 18172698 chr3L 18172772 18172794 6 95 5.5 4.0 4.8 1.0 118 chr3L 18172676 intron W - chr3L 18172735 intron W - chr3L 18172794 intron W - chr3L_6_18170001 chr3L_18170001 RAL-370 1649 chr3L 18198930 18198931 chr3L 24821491 24821494 6 6622563 0.0 16.0 8.0 0.7 6622564 chr3L 18198930 intergenic not near genes chr3L 21510212 intron M6 + chr3L 24821494 intergenic not near genes chr3L_6_21510001 chr3L_21510001 RAL-370 1650 chr3L 18203577 18203587 chr3L 18203692 18203702 5 115 5.0 0.0 2.5 1.4 125 chr3L 18203577 3` UTR CG7320 + chr3L 18203640 intergenic CG7320 + chr3L 18203702 intergenic CG7320 + chr3L_5_18200001 chr3L_18200001 RAL-370 1651 chr3L 18221083 18221097 chr3L 18221184 18221198 6 101 0.0 0.0 0.0 6.0 115 chr3L 18221083 intergenic not near genes chr3L 18221140 intergenic not near genes chr3L 18221198 intergenic not near genes chr3L_6_18220001 chr3L_18220001 RAL-370 1652 chr3L 18221108 18221130 chr3L 18221180 18221228 4 92 0.0 0.0 0.0 4.0 120 chr3L 18221108 intergenic not near genes chr3L 18221168 intergenic not near genes chr3L 18221228 intergenic not near genes chr3L_4_18220001 chr3L_18220001 RAL-370 1653 chr3L 18223146 18223183 chr3L 18223249 18223296 6 104 4.5 0.0 2.2 1.9 150 chr3L 18223146 intergenic not near genes chr3L 18223221 intergenic not near genes chr3L 18223296 intergenic not near genes chr3L_6_18220001 chr3L_18220001 RAL-370 1654 chr3L 18239866 18239899 chr3L 18239960 18239995 19 93 4.5 4.5 4.5 3.5 129 chr3L 18239866 intergenic not near genes chr3L 18239930 intergenic not near genes chr3L 18239995 intergenic not near genes chr3L_19_18235001 chr3L_18235001 RAL-370 1655 chr3L 18258835 18258881 chr3L 18258981 18259027 14 143 5.5 2.0 3.8 2.9 192 chr3L 18258835 intergenic not near genes chr3L 18258931 intergenic not near genes chr3L 18259027 intergenic not near genes chr3L_14_18255001 chr3L_18255001 RAL-370 1656 chr3L 18262450 18262487 chr3L 18262553 18262590 6 103 1.0 2.0 1.5 2.4 140 chr3L 18262450 intergenic not near genes chr3L 18262520 intergenic not near genes chr3L 18262590 intergenic not near genes chr3L_6_18260001 chr3L_18260001 RAL-370 1657 chr3L 18339310 18339419 chr3L 18339494 18339517 4 141 0.0 3.5 1.8 1.4 207 chr3L 18339310 intergenic not near genes chr3L 18339414 intergenic not near genes chr3L 18339517 intergenic not near genes chr3L_4_18335001 chr3L_18335001 RAL-370 1658 chr3L 18383434 18383477 chr3L 18383538 18383584 12 106 2.0 3.0 2.5 3.4 150 chr3L 18383434 intergenic not near genes chr3L 18383509 intergenic not near genes chr3L 18383584 intergenic not near genes chr3L_12_18380001 chr3L_18380001 RAL-370 1659 chr3L 18408711 18408757 chr3L 18408817 18408863 11 106 1.5 3.5 2.5 3.1 152 chr3L 18408711 intergenic not near genes chr3L 18408787 intergenic not near genes chr3L 18408863 intergenic not near genes chr3L_11_18405001 chr3L_18405001 RAL-370 1660 chr3L 9013690 9013692 chr3L 18417066 18417066 8 9403375 22.0 13.0 17.5 0.4 9403376 chr3L 9013690 intron Doc2 - chr3L 13715378 intron bru-3 - chr3L 18417066 intergenic not near genes chr3L_8_13715001 chr3L_13715001 RAL-370 1661 chr3L 18445230 18445273 chr3L 18445326 18445352 7 85 3.5 0.5 2.0 2.3 122 chr3L 18445230 intergenic not near genes chr3L 18445291 intergenic not near genes chr3L 18445352 intergenic not near genes chr3L_7_18445001 chr3L_18445001 RAL-370 1662 chr3L 18456255 18456287 chr3L 18456363 18456394 9 108 6.5 5.0 5.8 1.3 139 chr3L 18456255 intergenic CR44670 - chr3L 18456324 intergenic CR44670 - chr3L 18456394 intergenic CR44670 - chr3L_9_18455001 chr3L_18455001 RAL-370 1663 chr3L 18506118 18506162 chr3L 18509601 18509615 F-element 9 3479 4.5 4.5 4.5 1.6 3497 chr3L 18506118 intergenic not near genes chr3L 18507866 intergenic not near genes chr3L 18509615 intergenic not near genes chr3L_9_18505001 chr3L_18505001 RAL-370 1664 chr3L 18528626 18528658 chr3L 18537806 18537839 roo 4 9178 2.5 4.5 3.5 0.9 9213 chr3L 18528626 intergenic not near genes chr3L 18533232 intergenic not near genes chr3L 18537839 intergenic not near genes chr3L_4_18530001 chr3L_18530001 RAL-370 1665 chr3L 18546689 18546736 chr3L 18546803 18546821 15 108 0.0 1.5 0.8 8.3 132 chr3L 18546689 intergenic not near genes chr3L 18546755 intergenic not near genes chr3L 18546821 intergenic not near genes chr3L_15_18545001 chr3L_18545001 RAL-370 1666 chr3L 18567014 18567049 chr3L 18567120 18567155 8 106 3.0 5.5 4.2 1.5 141 chr3L 18567014 intron AstC-R1 + chr3L 18567084 intron AstC-R1 + chr3L 18567155 intron AstC-R1 + chr3L_8_18565001 chr3L_18565001 RAL-370 1667 chr3L 18579557 18579587 chr3L 18579699 18579725 5 144 2.0 4.5 3.2 1.2 168 chr3L 18579557 intergenic not near genes chr3L 18579641 intergenic not near genes chr3L 18579725 intergenic not near genes chr3L_5_18575001 chr3L_18575001 RAL-370 1668 chr3L 18593930 18593981 chr3L 18595930 18595984 Doc 6 2000 2.5 0.0 1.2 2.7 2054 chr3L 18593930 intergenic term - chr3L 18594957 intergenic not near genes chr3L 18595984 intergenic CR45389 + chr3L_6_18590001 chr3L_18590001 RAL-370 1669 chr3L 18606738 18606770 chr3L 18606947 18606988 10 206 6.5 3.5 5.0 1.7 250 chr3L 18606738 intron,intron,exon CG13380 -,CG4174 -,CG18233 + chr3L 18606863 intron,intron,exon CG13380 -,CG4174 -,CG18233 + chr3L 18606988 intron,intron,exon CG13380 -,CG4174 -,CG18233 + chr3L_10_18605001 chr3L_18605001 RAL-370 1670 chr3L 18638561 18638591 chr3L 18638675 18638705 11 113 7.5 5.0 6.2 1.5 144 chr3L 18638561 intron MYPT-75D + chr3L 18638633 intron MYPT-75D + chr3L 18638705 intron MYPT-75D + chr3L_11_18635001 chr3L_18635001 RAL-370 1671 chr3L 18656182 18656214 chr3L 18656282 18656319 11 104 6.0 7.5 6.8 1.4 137 chr3L 18656182 intron MYPT-75D + chr3L 18656250 intron MYPT-75D + chr3L 18656319 intron MYPT-75D + chr3L_11_18655001 chr3L_18655001 RAL-370 1672 chr3L 18679383 18679417 chr3L 18689117 18689151 20 9734 36.5 27.5 32.0 0.6 9768 chr3L 18679383 intergenic not near genes chr3L 18684267 3` UTR Cyp12c1 - chr3L 18689151 intergenic not near genes chr3L_20_18680001 chr3L_18680001 RAL-370 1673 chr3L 18710740 18710788 chr3L 18718712 18718760 Stalker2 10 7971 5.0 2.0 3.5 2.2 8020 chr3L 18710740 intergenic not near genes chr3L 18714750 intergenic not near genes chr3L 18718760 intergenic not near genes chr3L_10_18710001 chr3L_18710001 RAL-370 1674 chr3L 18721784 18721800 chr3L 18721895 18721911 6 111 4.5 6.0 5.2 1.0 127 chr3L 18721784 intergenic CG12477 - chr3L 18721848 intergenic CG12477 - chr3L 18721911 3` UTR CG12477 - chr3L_6_18720001 chr3L_18720001 RAL-370 1675 chr3L 18725046 18725083 chr3L 18725682 18725719 11 636 3.0 4.5 3.8 2.3 673 chr3L 18725046 intergenic not near genes chr3L 18725382 intergenic not near genes chr3L 18725719 intergenic not near genes chr3L_11_18725001 chr3L_18725001 RAL-370 1676 chr3L 18772391 18772438 chr3L 18781092 18781139 roo 16 8699 4.0 5.0 4.5 2.9 8748 chr3L 18772391 intron ftz-f1 - chr3L 18776765 intron ftz-f1 - chr3L 18781139 intron ftz-f1 - chr3L_16_18775001 chr3L_18775001 RAL-370 1677 chr3L 18833767 18833806 chr3L 18834948 18834978 1360 12 1179 4.5 6.5 5.5 1.8 1211 chr3L 18833767 intron Indy - chr3L 18834372 intron Indy - chr3L 18834978 intron Indy - chr3L_12_18830001 chr3L_18830001 RAL-370 1678 chr3L 18843848 18843875 chr3L 18843966 18843992 5 118 4.5 1.5 3.0 1.2 144 chr3L 18843848 intron Indy - chr3L 18843920 intron Indy - chr3L 18843992 intron Indy - chr3L_5_18840001 chr3L_18840001 RAL-370 1679 chr3L 18868949 18868995 chr3L 18869050 18869094 5 100 1.0 3.0 2.0 1.7 145 chr3L 18868949 3` UTR Dysb + chr3L 18869022 3` UTR Dysb + chr3L 18869094 3` UTR Dysb + chr3L_5_18865001 chr3L_18865001 RAL-370 1680 chr3L 18896761 18896786 chr3L 18896915 18896936 4 153 2.5 4.5 3.5 0.9 175 chr3L 18896761 intron CG3902 - chr3L 18896848 intron CG3902 - chr3L 18896936 intron CG3902 - chr3L_4_18895001 chr3L_18895001 RAL-370 1681 chr3L 18924459 18924486 chr3L 18924555 18924582 8 95 3.5 4.0 3.8 1.7 123 chr3L 18924459 intron CG32204 - chr3L 18924520 intron CG32204 - chr3L 18924582 intron CG32204 - chr3L_8_18920001 chr3L_18920001 RAL-370 1682 chr3L 18933076 18933127 chr3L 18933177 18933232 12 104 2.0 3.5 2.8 3.2 156 chr3L 18933076 intron CG32204 - chr3L 18933154 intron CG32204 - chr3L 18933232 intron CG32204 - chr3L_12_18930001 chr3L_18930001 RAL-370 1683 chr3L 18948862 18948907 chr3L 18949105 18949112 12 242 1.0 1.5 1.2 5.5 250 chr3L 18948862 intergenic not near genes chr3L 18948987 intergenic not near genes chr3L 18949112 intergenic not near genes chr3L_12_18945001 chr3L_18945001 RAL-370 1684 chr3L 18958581 18958603 chr3L 18958677 18958699 4 96 3.5 3.0 3.2 1.0 118 chr3L 18958581 intergenic not near genes chr3L 18958640 intergenic not near genes chr3L 18958699 intergenic not near genes chr3L_4_18955001 chr3L_18955001 RAL-370 1685 chr3L 18959074 18959115 chr3L 18961951 18961993 6 2883 33.5 19.0 26.2 0.2 2919 chr3L 18959074 intergenic not near genes chr3L 18960534 intergenic not near genes chr3L 18961993 intergenic not near genes chr3L_6_18960001 chr3L_18960001 RAL-370 1686 chr3L 19008823 19008869 chr3L 19009174 19009227 jockey 6 354 3.5 2.0 2.8 1.6 404 chr3L 19008823 intron nkd - chr3L 19009025 intron nkd - chr3L 19009227 intron nkd - chr3L_6_19005001 chr3L_19005001 RAL-370 1687 chr3L 19029433 19029466 chr3L 19029555 19029588 5 121 5.5 4.5 5.0 0.8 155 chr3L 19029433 intron nkd - chr3L 19029510 intron nkd - chr3L 19029588 intron nkd - chr3L_5_19025001 chr3L_19025001 RAL-370 1688 chr3L 19091142 19091184 chr3L 19091259 19091301 11 116 5.5 3.0 4.2 2.1 159 chr3L 19091142 intergenic CR45386 + chr3L 19091222 intergenic CR45386 + chr3L 19091301 intergenic CR45386 + chr3L_11_19090001 chr3L_19090001 RAL-370 1689 chr3L 19101700 19101741 chr3L 19102092 19102133 11 391 0.5 7.5 4.0 2.2 433 chr3L 19101700 intergenic not near genes chr3L 19101916 intergenic not near genes chr3L 19102133 intergenic not near genes chr3L_11_19100001 chr3L_19100001 RAL-370 1690 chr3L 19111355 19111370 chr3L 19111462 19111477 7 107 4.5 11.0 7.8 0.8 122 chr3L 19111355 intron CG14082 - chr3L 19111416 intron CG14082 - chr3L 19111477 intron CG14082 - chr3L_7_19110001 chr3L_19110001 RAL-370 1691 chr3L 19115632 19115635 chr3L 19115830 19115830 BS 4 197 11.0 5.5 8.2 0.4 198 chr3L 19115632 intron CG14082 - chr3L 19115731 intron CG14082 - chr3L 19115830 intron CG14082 - chr3L_4_19115001 chr3L_19115001 RAL-370 1692 chr3L 19115636 19115674 chr3L 19115819 19115832 BS 10 186 6.5 3.5 5.0 1.7 196 chr3L 19115636 intron CG14082 - chr3L 19115734 intron CG14082 - chr3L 19115832 intron CG14082 - chr3L_10_19115001 chr3L_19115001 RAL-370 1693 chr3L 19117028 19117075 chr3L 19124494 19124542 mdg1 16 7461 2.5 3.5 3.0 4.0 7514 chr3L 19117028 intron CG14082 - chr3L 19120785 intron CG14082 - chr3L 19124542 intron CG14082 - chr3L_16_19120001 chr3L_19120001 RAL-370 1694 chr3L 19138537 19138587 chr3L 19138636 19138688 13 93 2.5 4.0 3.2 3.1 151 chr3L 19138537 intron CG14082 - chr3L 19138612 intron CG14082 - chr3L 19138688 intron CG14082 - chr3L_13_19135001 chr3L_19135001 RAL-370 1695 chr3L 19182370 19182415 chr3L 19182467 19182516 10 99 3.0 2.5 2.8 2.6 146 chr3L 19182370 intron fz2 - chr3L 19182443 intron fz2 - chr3L 19182516 intron fz2 - chr3L_10_19180001 chr3L_19180001 RAL-370 1696 chr3L 19208043 19208055 chr3L 19209437 19209449 Doc 4 1394 9.0 3.0 6.0 0.6 1406 chr3L 19208043 intron fz2 - chr3L 19208746 intron fz2 - chr3L 19209449 intron fz2 - chr3L_4_19205001 chr3L_19205001 RAL-370 1697 chr3L 19208056 19208091 chr3L 19209434 19209485 Doc 9 1391 4.5 3.0 3.8 1.9 1429 chr3L 19208056 intron fz2 - chr3L 19208770 intron fz2 - chr3L 19209485 intron fz2 - chr3L_9_19205001 chr3L_19205001 RAL-370 1698 chr3L 19216499 19216515 chr3L 19216591 19216612 4 96 6.5 2.0 4.2 0.8 113 chr3L 19216499 intron fz2 - chr3L 19216556 intron fz2 - chr3L 19216612 intron fz2 - chr3L_4_19215001 chr3L_19215001 RAL-370 1699 chr3L 19220633 19220634 chr3L 22908066 22908066 18 3687433 23.5 19.5 21.5 0.8 3687433 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908066 intergenic not near genes chr3L_18_21060001 chr3L_21060001 RAL-370 1700 chr3L 19220635 19220635 chr3L 22908066 22908067 4 3687432 23.0 19.5 21.2 0.2 3687432 chr3L 19220635 intron fz2 - chr3L 21064351 intron siz + chr3L 22908067 intergenic not near genes chr3L_4_21060001 chr3L_21060001 RAL-370 1701 chr3L 19220637 19220637 chr3L 22908066 22908067 14 3687429 23.0 19.5 21.2 0.6 3687430 chr3L 19220637 intron fz2 - chr3L 21064352 intron siz + chr3L 22908067 intergenic not near genes chr3L_14_21060001 chr3L_21060001 RAL-370 1702 chr3L 19228381 19228428 chr3L 19228494 19228540 20 110 3.0 1.5 2.2 6.2 159 chr3L 19228381 intron fz2 - chr3L 19228460 intron fz2 - chr3L 19228540 intron fz2 - chr3L_20_19225001 chr3L_19225001 RAL-370 1703 chr3L 19231336 19231383 chr3L 19231443 19231490 12 105 2.5 3.0 2.8 3.2 154 chr3L 19231336 intron fz2 - chr3L 19231413 intron fz2 - chr3L 19231490 intron fz2 - chr3L_12_19230001 chr3L_19230001 RAL-370 1704 chr3L 19248853 19248882 chr3L 19249036 19249074 7 186 2.0 3.0 2.5 2.0 221 chr3L 19248853 intergenic not near genes chr3L 19248964 intergenic not near genes chr3L 19249074 intergenic not near genes chr3L_7_19245001 chr3L_19245001 RAL-370 1705 chr3L 19269798 19269846 chr3L 19270022 19270033 11 216 3.5 4.0 3.8 2.3 235 chr3L 19269798 intron,exon CG14085 +,CG14088 - chr3L 19269916 intron,exon CG14085 +,CG14088 - chr3L 19270033 intron,exon CG14085 +,CG14088 - chr3L_11_19265001 chr3L_19265001 RAL-370 1706 chr3L 19353734 19353775 chr3L 19354761 19354799 17 1025 2.0 2.0 2.0 5.7 1065 chr3L 19353734 intron CG32206 - chr3L 19354266 intron CG32206 - chr3L 19354799 intron CG32206 - chr3L_17_19350001 chr3L_19350001 RAL-370 1707 chr3L 19366821 19366856 chr3L 19367056 19367089 11 235 4.5 4.5 4.5 2.0 268 chr3L 19366821 intron CG32206 - chr3L 19366955 intron CG32206 - chr3L 19367089 intron CG32206 - chr3L_11_19365001 chr3L_19365001 RAL-370 1708 chr3L 19417806 19417827 chr3L 19417877 19417927 4 92 4.5 4.0 4.2 0.8 121 chr3L 19417806 intergenic not near genes chr3L 19417866 intergenic not near genes chr3L 19417927 intergenic not near genes chr3L_4_19415001 chr3L_19415001 RAL-370 1709 chr3L 19426737 19426755 chr3L 19426835 19426852 4 97 9.0 5.5 7.2 0.5 115 chr3L 19426737 intergenic not near genes chr3L 19426794 intergenic not near genes chr3L 19426852 intergenic not near genes chr3L_4_19425001 chr3L_19425001 RAL-370 1710 chr3L 19426764 19426768 chr3L 19426831 19426865 5 91 7.0 5.5 6.2 0.7 101 chr3L 19426764 intergenic not near genes chr3L 19426814 intergenic not near genes chr3L 19426865 intergenic not near genes chr3L_5_19425001 chr3L_19425001 RAL-370 1711 chr3L 19488477 19488498 chr3L 19488579 19488600 4 102 9.0 7.0 8.0 0.4 123 chr3L 19488477 intergenic pncr009:3L -,CG32212 + chr3L 19488538 intergenic pncr009:3L -,CG32212 + chr3L 19488600 intergenic pncr009:3L -,CG32212 + chr3L_4_19485001 chr3L_19485001 RAL-370 1712 chr3L 19554795 19554852 chr3L 19554910 19554966 5 114 1.0 0.5 0.8 2.8 171 chr3L 19554795 intergenic CG9300 + chr3L 19554880 intergenic CG9300 + chr3L 19554966 intergenic CG9300 + chr3L_5_19550001 chr3L_19550001 RAL-370 1713 chr3L 19792343 19792362 chr3L 19792458 19792477 4 115 6.0 1.0 3.5 0.9 134 chr3L 19792343 intron,intron CG42637 -,Gyc76C - chr3L 19792410 intron,intron CG42637 -,Gyc76C - chr3L 19792477 intron,intron CG42637 -,Gyc76C - chr3L_4_19790001 chr3L_19790001 RAL-370 1714 chr3L 19807476 19807489 chr3L 19807582 19807594 6 106 9.5 5.0 7.2 0.7 118 chr3L 19807476 intron Kap-alpha1 + chr3L 19807535 intron Kap-alpha1 + chr3L 19807594 intron Kap-alpha1 + chr3L_6_19805001 chr3L_19805001 RAL-370 1715 chr3L 19807490 19807528 chr3L 19807580 19807632 9 104 5.0 5.0 5.0 1.5 142 chr3L 19807490 intron Kap-alpha1 + chr3L 19807561 intron Kap-alpha1 + chr3L 19807632 intron Kap-alpha1 + chr3L_9_19805001 chr3L_19805001 RAL-370 1716 chr3L 19820280 19820309 chr3L 19827849 19827877 412 5 7569 3.0 2.0 2.5 1.4 7597 chr3L 19820280 intron Deaf1 + chr3L 19824078 intron Deaf1 + chr3L 19827877 intron Deaf1 + chr3L_5_19820001 chr3L_19820001 RAL-370 1717 chr3L 19848488 19848532 chr3L 19857695 19857739 roo 16 9209 8.5 8.0 8.2 1.7 9251 chr3L 19848488 intron Papss + chr3L 19853114 intron Papss + chr3L 19857739 intron Papss + chr3L_16_19850001 chr3L_19850001 RAL-370 1718 chr3L 19861810 19861850 chr3L 19863618 19863634 S-element 9 1801 4.5 4.0 4.2 1.7 1824 chr3L 19861810 5` UTR CR45433 + chr3L 19862722 intergenic not near genes chr3L 19863634 intergenic not near genes chr3L_9_19860001 chr3L_19860001 RAL-370 1719 chr3L 19981183 19981229 chr3L 19981283 19981329 9 99 4.5 3.0 3.8 1.9 146 chr3L 19981183 intergenic not near genes chr3L 19981256 intergenic CG17732 + chr3L 19981329 intergenic CG17732 + chr3L_9_19980001 chr3L_19980001 RAL-370 1720 chr3L 20113458 20113502 chr3L 20113573 20113616 11 114 5.5 2.5 4.0 2.2 158 chr3L 20113458 intergenic not near genes chr3L 20113537 intergenic not near genes chr3L 20113616 intergenic not near genes chr3L_11_20110001 chr3L_20110001 RAL-370 1721 chr3L 20113643 20113681 chr3L 20122920 20122956 roo 11 9276 2.0 2.0 2.0 3.7 9313 chr3L 20113643 intergenic not near genes chr3L 20118300 intergenic not near genes chr3L 20122956 intergenic not near genes chr3L_11_20115001 chr3L_20115001 RAL-370 1722 chr3L 20143064 20143073 chr3L 20143164 20143173 6 100 8.0 5.0 6.5 0.8 109 chr3L 20143064 intergenic not near genes chr3L 20143118 intergenic not near genes chr3L 20143173 intergenic not near genes chr3L_6_20140001 chr3L_20140001 RAL-370 1723 chr3L 20143078 20143109 chr3L 20143161 20143208 10 98 5.0 3.0 4.0 2.0 130 chr3L 20143078 intergenic not near genes chr3L 20143143 intergenic not near genes chr3L 20143208 intergenic not near genes chr3L_10_20140001 chr3L_20140001 RAL-370 1724 chr3L 20148268 20148318 chr3L 20148377 20148428 16 107 3.5 4.0 3.8 3.3 160 chr3L 20148268 intergenic not near genes chr3L 20148348 intergenic not near genes chr3L 20148428 intergenic not near genes chr3L_16_20145001 chr3L_20145001 RAL-370 1725 chr3L 20257313 20257355 chr3L 20258453 20258475 pogo 13 1138 4.0 4.5 4.2 2.5 1162 chr3L 20257313 intron rdgC + chr3L 20257894 intron rdgC + chr3L 20258475 intron rdgC + chr3L_13_20255001 chr3L_20255001 RAL-370 1726 chr3L 20283656 20283705 chr3L 20283760 20283807 22 100 5.5 4.5 5.0 3.7 151 chr3L 20283656 intron gogo - chr3L 20283732 intron gogo - chr3L 20283807 intron gogo - chr3L_22_20280001 chr3L_20280001 RAL-370 1727 chr3L 20386920 20386964 chr3L 20387042 20387086 8 122 3.0 4.0 3.5 1.8 166 chr3L 20386920 intron fbl + chr3L 20387003 intron fbl + chr3L 20387086 intron fbl + chr3L_8_20385001 chr3L_20385001 RAL-370 1728 chr3L 20444796 20444851 chr3L 20444939 20444994 13 143 3.5 0.5 2.0 4.3 198 chr3L 20444796 intron CG5910 + chr3L 20444895 intron CG5910 + chr3L 20444994 intron CG5910 + chr3L_13_20440001 chr3L_20440001 RAL-370 1729 chr3L 20447680 20447691 chr3L 20447779 20447786 5 98 9.0 2.0 5.5 0.8 106 chr3L 20447680 intron CG5910 + chr3L 20447733 intron CG5910 + chr3L 20447786 intron CG5910 + chr3L_5_20445001 chr3L_20445001 RAL-370 1730 chr3L 20462572 20462594 chr3L 20462673 20462694 7 101 4.5 0.0 2.2 2.2 122 chr3L 20462572 intron atk - chr3L 20462633 intron atk - chr3L 20462694 intron atk - chr3L_7_20460001 chr3L_20460001 RAL-370 1731 chr3L 20476737 20476780 chr3L 20484356 20484399 springer 15 7619 3.0 4.0 3.5 3.3 7662 chr3L 20476737 3` UTR isoQC + chr3L 20480568 intergenic not near genes chr3L 20484399 3` UTR ZnT77C - chr3L_15_20480001 chr3L_20480001 RAL-370 1732 chr3L 20487647 20487663 chr3L 20488118 20488118 INE-1 6 468 7.5 4.0 5.8 0.9 471 chr3L 20487647 intron ZnT77C - chr3L 20487882 intron ZnT77C - chr3L 20488118 intron ZnT77C - chr3L_6_20485001 chr3L_20485001 RAL-370 1733 chr3L 20548344 20548387 chr3L 20548453 20548495 11 108 4.5 4.5 4.5 2.0 151 chr3L 20548344 intergenic not near genes chr3L 20548420 intergenic not near genes chr3L 20548495 intergenic not near genes chr3L_11_20545001 chr3L_20545001 RAL-370 1734 chr3L 20590047 20590093 chr3L 20590605 20590617 412 6 536 6.0 1.5 3.8 1.2 570 chr3L 20590047 intergenic not near genes chr3L 20590332 intergenic not near genes chr3L 20590617 intergenic not near genes chr3L_6_20590001 chr3L_20590001 RAL-370 1735 chr3L 20603417 20603460 chr3L 20603528 20603571 14 111 2.5 4.0 3.2 3.3 154 chr3L 20603417 intron knrl - chr3L 20603494 intron knrl - chr3L 20603571 intron knrl - chr3L_14_20600001 chr3L_20600001 RAL-370 1736 chr3L 20624596 20624644 chr3L 20624702 20624750 9 106 1.0 6.5 3.8 1.9 154 chr3L 20624596 intergenic CR44684 - chr3L 20624673 intergenic CR44684 - chr3L 20624750 intergenic CR44684 - chr3L_9_20620001 chr3L_20620001 RAL-370 1737 chr3L 20652611 20652626 chr3L 20652682 20652726 4 93 2.5 2.0 2.2 1.2 115 chr3L 20652611 intergenic CR44685 + chr3L 20652668 intergenic CR44685 + chr3L 20652726 intergenic CR44685 + chr3L_4_20650001 chr3L_20650001 RAL-370 1738 chr3L 20849255 20849301 chr3L 20849351 20849399 13 98 4.0 7.0 5.5 2.0 144 chr3L 20849255 intron CG32432 - chr3L 20849327 intron CG32432 - chr3L 20849399 intron CG32432 - chr3L_13_20845001 chr3L_20845001 RAL-370 1739 chr3L 20858050 20858102 chr3L 20858169 20858220 14 119 5.5 2.0 3.8 2.9 170 chr3L 20858050 intron CG32432 - chr3L 20858135 intron CG32432 - chr3L 20858220 intron CG32432 - chr3L_14_20855001 chr3L_20855001 RAL-370 1740 chr3L 20902699 20902725 chr3L 20902778 20902789 5 85 2.0 2.0 2.0 1.7 90 chr3L 20902699 intergenic CR45383 + chr3L 20902744 intergenic CR45383 + chr3L 20902789 intergenic CR45383 + chr3L_5_20900001 chr3L_20900001 RAL-370 1741 chr3L 20942551 20942595 chr3L 20942648 20942692 7 95 6.0 10.5 8.2 0.8 141 chr3L 20942551 intron fng - chr3L 20942622 intron fng - chr3L 20942692 intron fng - chr3L_7_20940001 chr3L_20940001 RAL-370 1742 chr3L 20978377 20978415 chr3L 20978473 20978509 8 96 3.5 3.5 3.5 1.8 132 chr3L 20978377 intergenic not near genes chr3L 20978443 intergenic not near genes chr3L 20978509 intergenic not near genes chr3L_8_20975001 chr3L_20975001 RAL-370 1743 chr3L 21009037 21009083 chr3L 21009131 21009179 13 91 8.0 4.5 6.2 1.8 142 chr3L 21009037 intron skd - chr3L 21009108 intron skd - chr3L 21009179 intron skd - chr3L_13_21005001 chr3L_21005001 RAL-370 1744 chr3L 21014895 21014937 chr3L 21023394 21023413 Tirant 8 8490 5.5 3.0 4.2 1.5 8518 chr3L 21014895 intron skd - chr3L 21019154 intron skd - chr3L 21023413 intron skd - chr3L_8_21015001 chr3L_21015001 RAL-370 1745 chr3L 21067935 21067981 chr3L 21068035 21068081 14 97 4.5 6.0 5.2 2.3 146 chr3L 21067935 intron siz + chr3L 21068008 intron siz + chr3L 21068081 intron siz + chr3L_14_21065001 chr3L_21065001 RAL-370 1746 chr3L 21082193 21082232 chr3L 21082290 21082330 14 97 3.5 5.5 4.5 2.5 137 chr3L 21082193 intron ko - chr3L 21082262 intron ko - chr3L 21082330 intron ko - chr3L_14_21080001 chr3L_21080001 RAL-370 1747 chr3L 21150911 21150961 chr3L 21151067 21151117 13 153 1.5 4.5 3.0 3.2 206 chr3L 21150911 intron Ac78C - chr3L 21151014 intron Ac78C - chr3L 21151117 intron Ac78C - chr3L_13_21150001 chr3L_21150001 RAL-370 1748 chr3L 21151845 21151895 chr3L 21156949 21156995 flea 15 5104 3.0 2.5 2.8 3.9 5150 chr3L 21151845 intron Ac78C - chr3L 21154420 intron Ac78C - chr3L 21156995 intron Ac78C - chr3L_15_21150001 chr3L_21150001 RAL-370 1749 chr3L 21160951 21160982 chr3L 21161062 21161094 7 114 3.5 2.5 3.0 1.8 143 chr3L 21160951 5` UTR Ac78C - chr3L 21161022 intron Ac78C - chr3L 21161094 intron Ac78C - chr3L_7_21160001 chr3L_21160001 RAL-370 1750 chr3L 21274187 21274235 chr3L 21274378 21274422 14 188 3.5 2.5 3.0 3.5 235 chr3L 21274187 intron AcCoAS - chr3L 21274304 intron AcCoAS - chr3L 21274422 intron AcCoAS - chr3L_14_21270001 chr3L_21270001 RAL-370 1751 chr3L 21306126 21306175 chr3L 21315305 21315354 roo 10 9178 6.0 2.0 4.0 2.0 9228 chr3L 21306126 3` UTR CG7632 + chr3L 21310740 intron Pc - chr3L 21315354 3` UTR Pc - chr3L_10_21310001 chr3L_21310001 RAL-370 1752 chr3L 21319508 21319557 chr3L 21319618 21319666 21 106 8.0 5.5 6.8 2.7 158 chr3L 21319508 5` UTR Rab26 + chr3L 21319587 5` UTR Rab26 + chr3L 21319666 5` UTR Rab26 + chr3L_21_21315001 chr3L_21315001 RAL-370 1753 chr3L 21415131 21415162 chr3L 21415228 21415264 6 101 5.0 8.5 6.8 0.8 133 chr3L 21415131 intron rgn + chr3L 21415198 intron rgn + chr3L 21415264 intron rgn + chr3L_6_21415001 chr3L_21415001 RAL-370 1754 chr3L 21749295 21749348 chr3L 21754474 21754494 Doc 6 5165 2.0 2.5 2.2 1.9 5199 chr3L 21749295 intron Syn1 - chr3L 21751894 intron Syn1 - chr3L 21754494 intron Syn1 - chr3L_6_21750001 chr3L_21750001 RAL-370 1755 chr3L 21769051 21769084 chr3L 21769158 21769191 7 107 1.0 2.5 1.8 2.5 140 chr3L 21769051 intron,intron Syn1 -,CG42689 + chr3L 21769121 intron,intron Syn1 -,CG42689 + chr3L 21769191 intron,intron Syn1 -,CG42689 + chr3L_7_21765001 chr3L_21765001 RAL-370 1756 chr3L 21770031 21770040 chr3L 21770131 21770143 4 104 2.5 4.5 3.5 0.9 112 chr3L 21770031 5` UTR,intron,5` UTR Syn1 -,CG42689 +,CG7370 + chr3L 21770087 5` UTR,intron,intron Syn1 -,CG42689 +,CG7370 + chr3L 21770143 5` UTR,intron,intron Syn1 -,CG42689 +,CG7370 + chr3L_4_21770001 chr3L_21770001 RAL-370 1757 chr3L 21852239 21852273 chr3L 21852352 21852386 13 106 3.0 1.5 2.2 4.1 147 chr3L 21852239 intron mub + chr3L 21852312 intron mub + chr3L 21852386 intron mub + chr3L_13_21850001 chr3L_21850001 RAL-370 1758 chr3L 21868548 21868596 chr3L 21868658 21868706 17 107 2.5 3.0 2.8 4.5 158 chr3L 21868548 intron mub + chr3L 21868627 intron mub + chr3L 21868706 intron mub + chr3L_17_21865001 chr3L_21865001 RAL-370 1759 chr3L 21872408 21872452 chr3L 21872507 21872536 13 97 2.5 2.5 2.5 3.7 128 chr3L 21872408 intron mub + chr3L 21872472 intron mub + chr3L 21872536 intron mub + chr3L_13_21870001 chr3L_21870001 RAL-370 1760 chr3L 21886371 21886417 chr3L 21886474 21886520 17 101 4.5 6.5 5.5 2.6 149 chr3L 21886371 intron,intron mub +,CR43878 - chr3L 21886446 intron,intron mub +,CR43878 - chr3L 21886520 intron,intron mub +,CR43878 - chr3L_17_21885001 chr3L_21885001 RAL-370 1761 chr3L 21905327 21905347 chr3L 21905427 21905447 7 97 7.0 11.0 9.0 0.7 120 chr3L 21905327 intron mub + chr3L 21905387 intron mub + chr3L 21905447 intron mub + chr3L_7_21905001 chr3L_21905001 RAL-370 1762 chr3L 21905349 21905360 chr3L 21905425 21905434 7 91 4.0 10.5 7.2 0.9 85 chr3L 21905349 intron mub + chr3L 21905392 intron mub + chr3L 21905434 intron mub + chr3L_7_21905001 chr3L_21905001 RAL-370 1763 chr3L 22001333 22001343 chr3L 22001423 22001442 4 96 9.5 2.5 6.0 0.6 109 chr3L 22001333 intergenic not near genes chr3L 22001388 intergenic not near genes chr3L 22001442 intergenic not near genes chr3L_4_22000001 chr3L_22000001 RAL-370 1764 chr3L 22006737 22006788 chr3L 22006881 22006932 18 142 3.0 3.0 3.0 4.5 195 chr3L 22006737 intergenic not near genes chr3L 22006834 intergenic not near genes chr3L 22006932 intergenic not near genes chr3L_18_22005001 chr3L_22005001 RAL-370 1765 chr3L 22008830 22008873 chr3L 22008927 22008961 7 88 4.0 1.5 2.8 1.8 131 chr3L 22008830 intergenic not near genes chr3L 22008896 intergenic not near genes chr3L 22008961 intergenic not near genes chr3L_7_22005001 chr3L_22005001 RAL-370 1766 chr3L 22034596 22034623 chr3L 22034718 22034743 9 121 5.0 4.0 4.5 1.6 147 chr3L 22034596 intergenic Oct-TyrR + chr3L 22034670 intergenic Oct-TyrR + chr3L 22034743 intergenic Oct-TyrR + chr3L_9_22030001 chr3L_22030001 RAL-370 1767 chr3L 22099661 22099704 chr3L 22105867 22105910 3S18 8 6206 3.0 3.5 3.2 1.9 6249 chr3L 22099661 intergenic not near genes chr3L 22102786 intergenic not near genes chr3L 22105910 intergenic not near genes chr3L_8_22100001 chr3L_22100001 RAL-370 1768 chr3L 22122154 22122190 chr3L 22122518 22122554 9 362 5.5 4.0 4.8 1.6 400 chr3L 22122154 5` UTR CR45236 + chr3L 22122354 intergenic CR45236 +,CR45235 + chr3L 22122554 intergenic CR45235 +,CR45236 + chr3L_9_22120001 chr3L_22120001 RAL-370 1769 chr3L 22137505 22137552 chr3L 22137598 22137649 14 96 2.5 2.5 2.5 4.0 144 chr3L 22137505 intron olf413 + chr3L 22137577 intron olf413 + chr3L 22137649 intron olf413 + chr3L_14_22135001 chr3L_22135001 RAL-370 1770 chr3L 22223425 22223441 chr3L 22223605 22223619 4 178 2.5 4.5 3.5 0.9 194 chr3L 22223425 intron olf413 + chr3L 22223522 intron olf413 + chr3L 22223619 intron olf413 + chr3L_4_22220001 chr3L_22220001 RAL-370 1771 chr3L 22223446 22223468 chr3L 22223602 22223647 8 172 1.5 3.5 2.5 2.3 201 chr3L 22223446 intron olf413 + chr3L 22223546 intron olf413 + chr3L 22223647 intron olf413 + chr3L_8_22220001 chr3L_22220001 RAL-370 1772 chr3L 22379914 22379948 chr3L 22380033 22380067 8 114 4.5 1.5 3.0 2.0 153 chr3L 22379914 intron Ten-m - chr3L 22379990 intron Ten-m - chr3L 22380067 intron Ten-m - chr3L_8_22375001 chr3L_22375001 RAL-370 1773 chr3L 22413879 22413900 chr3L 22413958 22414003 4 89 1.0 2.5 1.8 1.4 124 chr3L 22413879 intergenic not near genes chr3L 22413941 intergenic not near genes chr3L 22414003 intergenic not near genes chr3L_4_22410001 chr3L_22410001 RAL-370 1774 chr3L 22512995 22513040 chr3L 22513102 22513145 12 104 5.0 3.0 4.0 2.4 150 chr3L 22512995 intergenic not near genes chr3L 22513070 intergenic not near genes chr3L 22513145 intergenic not near genes chr3L_12_22510001 chr3L_22510001 RAL-370 1775 chr3L 22555759 22555795 chr3L 22563248 22563271 blood 7 7486 6.0 3.0 4.5 1.3 7512 chr3L 22555759 intergenic not near genes chr3L 22559515 intergenic not near genes chr3L 22563271 intergenic not near genes chr3L_7_22555001 chr3L_22555001 RAL-370 1776 chr3L 22577621 22577647 chr3L 22582402 22582455 Doc 5 4800 2.0 3.5 2.8 1.3 4834 chr3L 22577621 intergenic not near genes chr3L 22580038 intergenic not near genes chr3L 22582455 3` UTR CG14459 - chr3L_5_22580001 chr3L_22580001 RAL-370 1777 chr3L 22617172 22617218 chr3L 22624644 22624686 blood 16 7472 3.0 7.0 5.0 2.7 7514 chr3L 22617172 intron CG14459 - chr3L 22620929 intron CG14459 - chr3L 22624686 intron CG14459 - chr3L_16_22620001 chr3L_22620001 RAL-370 1778 chr3L 22678074 22678102 chr3L 22678171 22678191 7 104 5.0 3.5 4.2 1.3 117 chr3L 22678074 intron CG14457 + chr3L 22678132 intron CG14457 + chr3L 22678191 intron CG14457 + chr3L_7_22675001 chr3L_22675001 RAL-370 1779 chr3L 22731872 22731886 chr3L 22731971 22731983 6 99 5.5 12.0 8.8 0.6 111 chr3L 22731872 intron CG11367 + chr3L 22731928 intron CG11367 + chr3L 22731983 intron CG11367 + chr3L_6_22730001 chr3L_22730001 RAL-370 1780 chr3L 22761382 22761400 chr3L 22766836 22766854 Ivk 5 5454 4.0 8.0 6.0 0.7 5472 chr3L 22761382 intron SPoCk + chr3L 22764118 intron SPoCk + chr3L 22766854 intron SPoCk + chr3L_5_22760001 chr3L_22760001 RAL-370 1781 chr3L 22856589 22856639 chr3L 22856894 22856945 21 304 7.0 5.5 6.2 2.9 356 chr3L 22856589 intergenic not near genes chr3L 22856767 intergenic not near genes chr3L 22856945 intergenic not near genes chr3L_21_22855001 chr3L_22855001 RAL-370 1782 chr3L 22865960 22866005 chr3L 22867113 22867158 Doc 13 1153 8.5 6.0 7.2 1.6 1198 chr3L 22865960 exon CG33170 + chr3L 22866559 intron CG33170 + chr3L 22867158 intron CG33170 + chr3L_13_22865001 chr3L_22865001 RAL-370 1783 chr3L 22889646 22889696 chr3L 22889870 22889906 17 222 4.5 2.5 3.5 3.8 260 chr3L 22889646 intron slif + chr3L 22889776 intron slif + chr3L 22889906 intron slif + chr3L_17_22885001 chr3L_22885001 RAL-370 1784 chr3L 19220632 19220637 chr3L 22908066 22908066 25 3687432 23.0 19.5 21.2 1.1 3687434 chr3L 19220632 intron fz2 - chr3L 21064349 intron siz + chr3L 22908066 intergenic not near genes chr3L_25_21060001 chr3L_21060001 RAL-370 1785 chr3L 22908066 22908066 chr3L 24821494 24821495 5 1913428 18.0 15.5 16.8 0.3 1913429 chr3L 22908066 intergenic not near genes chr3L 23864780 intron CG40470 - chr3L 24821495 intergenic not near genes chr3L_5_23860001 chr3L_23860001 RAL-370 1786 chr3L 19220633 19220636 chr3L 22908067 22908067 12 3687433 22.5 20.0 21.2 0.5 3687434 chr3L 19220633 intron fz2 - chr3L 21064350 intron siz + chr3L 22908067 intergenic not near genes chr3L_12_21060001 chr3L_21060001 RAL-370 1787 chr3L 22908067 22908067 chr3L 24821492 24821495 4 1913427 18.0 16.0 17.0 0.2 1913428 chr3L 22908067 intergenic not near genes chr3L 23864781 intron CG40470 - chr3L 24821495 intergenic not near genes chr3L_4_23860001 chr3L_23860001 RAL-370 1788 chr3L 22974345 22974361 chr3L 22974444 22974456 6 97 11.5 4.5 8.0 0.7 111 chr3L 22974345 intergenic not near genes chr3L 22974400 intergenic not near genes chr3L 22974456 intergenic not near genes chr3L_6_22970001 chr3L_22970001 RAL-370 1789 chr3L 22974364 22974394 chr3L 22974443 22974490 9 92 5.5 4.0 4.8 1.6 126 chr3L 22974364 intergenic not near genes chr3L 22974427 intergenic not near genes chr3L 22974490 intergenic not near genes chr3L_9_22970001 chr3L_22970001 RAL-370 1790 chr3L 22985879 22985914 chr3L 22985975 22986013 11 98 4.0 3.5 3.8 2.3 134 chr3L 22985879 intergenic not near genes chr3L 22985946 intergenic not near genes chr3L 22986013 intergenic not near genes chr3L_11_22985001 chr3L_22985001 RAL-370 1791 chr3L 22989842 22989887 chr3L 22996836 22996881 297 12 6994 3.5 3.5 3.5 2.7 7039 chr3L 22989842 intergenic not near genes chr3L 22993362 intergenic not near genes chr3L 22996881 intergenic not near genes chr3L_12_22990001 chr3L_22990001 RAL-370 1792 chr3L 23042207 23042254 chr3L 23048980 23049026 gypsy6 19 6771 6.5 2.5 4.5 3.5 6819 chr3L 23042207 intergenic not near genes chr3L 23045616 intergenic not near genes chr3L 23049026 intergenic not near genes chr3L_19_23045001 chr3L_23045001 RAL-370 1793 chr3L 23096056 23096084 chr3L 23096157 23096187 16 102 6.0 2.0 4.0 3.2 131 chr3L 23096056 intergenic not near genes chr3L 23096122 intergenic not near genes chr3L 23096187 intergenic not near genes chr3L_16_23095001 chr3L_23095001 RAL-370 1794 chr3L 23255292 23255337 chr3L 23255387 23255397 10 92 3.5 1.5 2.5 2.9 105 chr3L 23255292 intron nAChRalpha4 + chr3L 23255344 intron nAChRalpha4 + chr3L 23255397 intron nAChRalpha4 + chr3L_10_23255001 chr3L_23255001 RAL-370 1795 chr3L 23428233 23428250 chr3L 23428333 23428350 7 99 7.5 2.5 5.0 1.2 117 chr3L 23428233 intergenic not near genes chr3L 23428292 intergenic not near genes chr3L 23428350 intergenic not near genes chr3L_7_23425001 chr3L_23425001 RAL-370 1796 chr3L 23428261 23428273 chr3L 23428332 23428351 5 89 3.0 2.5 2.8 1.3 90 chr3L 23428261 intergenic not near genes chr3L 23428306 intergenic not near genes chr3L 23428351 intergenic not near genes chr3L_5_23425001 chr3L_23425001 RAL-370 1797 chr3L 23529340 23529374 chr3L 23529445 23529479 13 104 5.0 3.5 4.2 2.5 139 chr3L 23529340 intergenic not near genes chr3L 23529410 intergenic not near genes chr3L 23529479 intergenic not near genes chr3L_13_23525001 chr3L_23525001 RAL-370 1798 chr3L 23665518 23665526 chr3L 23665625 23665636 gypsy8 5 109 30.5 28.5 29.5 0.2 118 chr3L 23665518 intron AGO3 + chr3L 23665577 intron AGO3 + chr3L 23665636 intron AGO3 + chr3L_5_23665001 chr3L_23665001 RAL-370 1799 chr3L 23754726 23754730 chr3L 23755025 23755029 gypsy8 4 299 7.0 3.5 5.2 0.6 303 chr3L 23754726 intergenic not near genes chr3L 23754878 intergenic not near genes chr3L 23755029 intergenic not near genes chr3L_4_23750001 chr3L_23750001 RAL-370 1800 chr3L 23754735 23754748 chr3L 23755024 23755047 gypsy8 6 297 3.5 3.0 3.2 1.4 312 chr3L 23754735 intergenic not near genes chr3L 23754891 intergenic not near genes chr3L 23755047 intergenic not near genes chr3L_6_23750001 chr3L_23750001 RAL-370 1801 chr3L 23787402 23787454 chr3L 23787506 23787539 15 101 10.5 13.5 12.0 1.2 137 chr3L 23787402 exon CG43968 + chr3L 23787470 intergenic CG43968 + chr3L 23787539 intergenic CG43968 + chr3L_15_23785001 chr3L_23785001 RAL-370 1802 chr3L 23824010 23824047 chr3L 23824443 23824445 8 428 3.0 6.0 4.5 1.5 435 chr3L 23824010 intergenic not near genes chr3L 23824228 intergenic not near genes chr3L 23824445 intergenic not near genes chr3L_8_23820001 chr3L_23820001 RAL-370 1803 chr3L 24021257 24021313 chr3L 24022434 24022453 1360 13 1171 4.0 3.5 3.8 2.7 1196 chr3L 24021257 intergenic not near genes chr3L 24021855 intergenic not near genes chr3L 24022453 intergenic not near genes chr3L_13_24020001 chr3L_24020001 RAL-370 1804 chr3L 24036770 24036813 chr3L 24036879 24036924 11 110 5.0 4.0 4.5 2.0 154 chr3L 24036770 intergenic not near genes chr3L 24036847 intergenic not near genes chr3L 24036924 intergenic not near genes chr3L_11_24035001 chr3L_24035001 RAL-370 1805 chr3L 24084480 24084519 chr3L 24084578 24084627 8 102 1.0 1.5 1.2 3.6 147 chr3L 24084480 intron Snap25 + chr3L 24084554 intron Snap25 + chr3L 24084627 intron Snap25 + chr3L_8_24080001 chr3L_24080001 RAL-370 1806 chr3L 24324303 24324325 chr3L 24324388 24324440 6 101 2.0 0.0 1.0 3.0 137 chr3L 24324303 intergenic not near genes chr3L 24324372 intergenic nvd + chr3L 24324440 intergenic nvd + chr3L_6_24320001 chr3L_24320001 RAL-370 1807 chr3L 24351965 24351991 chr3L 24352044 24352077 5 87 1.5 2.0 1.8 1.8 112 chr3L 24351965 intron nvd + chr3L 24352021 intron nvd + chr3L 24352077 intron nvd + chr3L_5_24350001 chr3L_24350001 RAL-370 1808 chr3L 24363227 24363270 chr3L 24363321 24363368 8 97 5.5 4.0 4.8 1.4 141 chr3L 24363227 intron nvd + chr3L 24363298 intron nvd + chr3L 24363368 intron nvd + chr3L_8_24360001 chr3L_24360001 RAL-370 1809 chr3L 24368487 24368501 chr3L 24368570 24368584 6 90 5.5 4.5 5.0 1.0 97 chr3L 24368487 intron nvd + chr3L 24368536 intron nvd + chr3L 24368584 intron nvd + chr3L_6_24365001 chr3L_24365001 RAL-370 1810 chr3L 24791885 24791913 chr3L 24796684 24796712 Doc 6 4799 0.5 3.0 1.8 2.1 4827 chr3L 24791885 intergenic not near genes chr3L 24794298 intergenic not near genes chr3L 24796712 intergenic not near genes chr3L_6_24790001 chr3L_24790001 RAL-370 1811 chr3L 25502176 25502214 chr3L 25502299 25502337 4 120 10.5 10.0 10.2 0.4 161 chr3L 25502176 intron CG41343 - chr3L 25502256 intron CG41343 - chr3L 25502337 intron CG41343 - chr3L_4_25500001 chr3L_25500001 RAL-370 1812 chr3L 25513558 25513609 chr3L 25513657 25513705 16 95 2.5 3.5 3.0 4.0 147 chr3L 25513558 intron CG41343 - chr3L 25513632 intron CG41343 - chr3L 25513705 intron CG41343 - chr3L_16_25510001 chr3L_25510001 RAL-370 1813 chr3L 25628505 25628517 chr3L 25633275 25633308 F-element 8 4788 4.0 10.0 7.0 1.0 4803 chr3L 25628505 intron CG41343 - chr3L 25630906 intron CG41343 - chr3L 25633308 intron CG41343 - chr3L_8_25630001 chr3L_25630001 RAL-370 1814 chr3L 26009428 26009454 chr3L 26009538 26009557 9 104 3.5 5.0 4.2 1.7 129 chr3L 26009428 intron CG40178 - chr3L 26009492 intron CG40178 - chr3L 26009557 intron CG40178 - chr3L_9_26005001 chr3L_26005001 RAL-370 1815 chr3L 26694909 26694955 chr3L 26695006 26695055 12 96 4.5 5.0 4.8 2.1 146 chr3L 26694909 intergenic not near genes chr3L 26694982 intergenic not near genes chr3L 26695055 intergenic not near genes chr3L_12_26690001 chr3L_26690001 RAL-370 1816 chr3L 27356096 27356105 chr3L 27357315 27357324 1360 4 1219 3.0 1.0 2.0 1.3 1228 chr3L 27356096 intron Dbp80 + chr3L 27356710 intron Dbp80 + chr3L 27357324 intron Dbp80 + chr3L_4_27355001 chr3L_27355001 RAL-370 1817 chr3L 27368860 27368902 chr3L 27369425 27369467 11 564 7.5 3.0 5.2 1.8 607 chr3L 27368860 intron Dbp80 + chr3L 27369164 intron Dbp80 + chr3L 27369467 intron Dbp80 + chr3L_11_27365001 chr3L_27365001 RAL-370 1818 chr3L 27390691 27390703 chr3L 27390767 27390799 4 88 34.5 27.5 31.0 0.1 108 chr3L 27390691 intron Dbp80 + chr3L 27390745 intron Dbp80 + chr3L 27390799 intron Dbp80 + chr3L_4_27390001 chr3L_27390001 RAL-370 1819 chr3L 27422680 27422729 chr3L 27422782 27422831 11 97 5.5 6.0 5.8 1.6 151 chr3L 27422680 intergenic not near genes chr3L 27422756 intergenic not near genes chr3L 27422831 intergenic not near genes chr3L_11_27420001 chr3L_27420001 RAL-370 1820 chr3L 27980676 27980725 chr3L 27985494 27985541 Doc 4 4818 2.5 3.0 2.8 1.1 4865 chr3L 27980676 intron CG17514 - chr3L 27983108 intron CG17514 - chr3L 27985541 intron CG17514 - chr3L_4_27980001 chr3L_27980001 RAL-370 1821 chr3R 1830827 1830839 chr3R 1830888 1830939 6 93 1.5 2.5 2.0 2.0 112 chr3R 1830827 intergenic not near genes chr3R 1830883 intergenic not near genes chr3R 1830939 intergenic not near genes chr3R_6_1830001 chr3R_1830001 RAL-370 1822 chr3R 1866434 1866442 chr3R 1866795 1866801 6 371 10.0 6.0 8.0 0.7 367 chr3R 1866434 intron CG42623 + chr3R 1866618 intron CG42623 + chr3R 1866801 intron CG42623 + chr3R_6_1865001 chr3R_1865001 RAL-370 1823 chr3R 2157567 2157580 chr3R 2160168 2160217 transib2 13 2604 19.0 20.5 19.8 0.6 2650 chr3R 2157567 intergenic not near genes chr3R 2158892 intergenic not near genes chr3R 2160217 intergenic not near genes chr3R_13_2155001 chr3R_2155001 RAL-370 1824 chr3R 2534150 2534167 chr3R 2541707 2541728 4 7564 16.0 15.0 15.5 0.2 7578 chr3R 2534150 intergenic not near genes chr3R 2537939 intergenic not near genes chr3R 2541728 intergenic not near genes chr3R_4_2535001 chr3R_2535001 RAL-370 1825 chr3R 2556890 2556931 chr3R 2557603 2557644 11 714 28.5 15.5 22.0 0.5 754 chr3R 2556890 intron CG41056 - chr3R 2557267 intron CG41056 - chr3R 2557644 intron CG41056 - chr3R_11_2555001 chr3R_2555001 RAL-370 1826 chr3R 3178696 3178713 chr3R 3595193 3595217 7 416500 18.0 17.0 17.5 0.4 416521 chr3R 3178696 intron CG42617 - chr3R 3386956 intergenic not near genes chr3R 3595217 intergenic not near genes chr3R_7_3385001 chr3R_3385001 RAL-370 1827 chr3R 3521546 3521581 chr3R 3521801 3521845 16 264 4.0 3.5 3.8 3.3 299 chr3R 3521546 intron Parp - chr3R 3521696 intron Parp - chr3R 3521845 intron Parp - chr3R_16_3520001 chr3R_3520001 RAL-370 1828 chr3R 3527042 3527057 chr3R 3527144 3527157 5 106 4.5 6.0 5.2 0.8 115 chr3R 3527042 intron Parp - chr3R 3527100 intron Parp - chr3R 3527157 intron Parp - chr3R_5_3525001 chr3R_3525001 RAL-370 1829 chr3R 3595316 3595329 chr3R 3595603 3595615 6 287 21.0 12.0 16.5 0.3 299 chr3R 3595316 intergenic not near genes chr3R 3595466 intergenic not near genes chr3R 3595615 intergenic not near genes chr3R_6_3595001 chr3R_3595001 RAL-370 1830 chr3R 4132886 4132920 chr3R 4133060 4133091 4 173 1.0 2.5 1.8 1.4 205 chr3R 4132886 5` UTR Gfat1 + chr3R 4132988 intron Gfat1 + chr3R 4133091 intron Gfat1 + chr3R_4_4130001 chr3R_4130001 RAL-370 1831 chr3R 4190633 4190676 chr3R 4190822 4190865 16 189 3.5 7.5 5.5 2.5 232 chr3R 4190633 intergenic Dsk - chr3R 4190749 intergenic Dsk - chr3R 4190865 intergenic not near genes chr3R_16_4190001 chr3R_4190001 RAL-370 1832 chr3R 4206049 4206103 chr3R 4211644 4211698 mdg3 18 5595 1.5 1.5 1.5 7.2 5649 chr3R 4206049 intron CG14636 - chr3R 4208874 intron CG14636 - chr3R 4211698 intron CG14636 - chr3R_18_4205001 chr3R_4205001 RAL-370 1833 chr3R 4366747 4366783 chr3R 4375138 4375186 roo 13 8402 4.0 2.5 3.2 3.1 8439 chr3R 4366747 3` UTR CG1090 + chr3R 4370966 intergenic not near genes chr3R 4375186 5` UTR CR44922 + chr3R_13_4370001 chr3R_4370001 RAL-370 1834 chr3R 4408391 4408440 chr3R 4412715 4412755 Juan 11 4321 5.5 5.0 5.2 1.8 4364 chr3R 4408391 intron CG32944 - chr3R 4410573 intron CG32944 - chr3R 4412755 intron CG32944 - chr3R_11_4410001 chr3R_4410001 RAL-370 1835 chr3R 4463385 4463403 chr3R 4463476 4463499 4 94 5.0 3.0 4.0 0.8 114 chr3R 4463385 intergenic not near genes chr3R 4463442 intergenic not near genes chr3R 4463499 intergenic not near genes chr3R_4_4460001 chr3R_4460001 RAL-370 1836 chr3R 4463405 4463421 chr3R 4463473 4463517 6 91 4.5 2.0 3.2 1.4 112 chr3R 4463405 intergenic not near genes chr3R 4463461 intergenic not near genes chr3R 4463517 intergenic not near genes chr3R_6_4460001 chr3R_4460001 RAL-370 1837 chr3R 4599284 4599332 chr3R 4599388 4599436 13 103 3.5 3.5 3.5 2.9 152 chr3R 4599284 intron CR44317 - chr3R 4599360 intron CR44317 - chr3R 4599436 intron CR44317 - chr3R_13_4595001 chr3R_4595001 RAL-370 1838 chr3R 4604266 4604280 chr3R 4604421 4604433 5 168 4.5 4.0 4.2 1.0 167 chr3R 4604266 intergenic not near genes chr3R 4604350 intergenic not near genes chr3R 4604433 intergenic not near genes chr3R_5_4600001 chr3R_4600001 RAL-370 1839 chr3R 4658017 4658059 chr3R 4658118 4658162 6 103 1.5 1.5 1.5 2.4 145 chr3R 4658017 intergenic spartin + chr3R 4658090 intergenic spartin + chr3R 4658162 intergenic spartin + chr3R_6_4655001 chr3R_4655001 RAL-370 1840 chr3R 4683161 4683202 chr3R 4684936 4684980 S-element 6 1774 5.5 3.0 4.2 1.2 1819 chr3R 4683161 intron CG43427 + chr3R 4684070 intron CG43427 + chr3R 4684980 intron CG43427 + chr3R_6_4680001 chr3R_4680001 RAL-370 1841 chr3R 4753228 4753248 chr3R 4757550 4757571 F-element 6 4322 7.5 7.0 7.2 0.7 4343 chr3R 4753228 intron,intron atms +,CG44098 - chr3R 4755400 intron,intron atms +,CG44098 - chr3R 4757571 intron,exon atms +,CG44098 - chr3R_6_4755001 chr3R_4755001 RAL-370 1842 chr3R 4759706 4759709 chr3R 4761223 4761226 hopper2 6 1517 7.5 11.0 9.2 0.6 1520 chr3R 4759706 intron,intron atms +,CG44098 - chr3R 4760466 intron,intron atms +,CG44098 - chr3R 4761226 intron,intron atms +,CG44098 - chr3R_6_4760001 chr3R_4760001 RAL-370 1843 chr3R 4759715 4759742 chr3R 4761218 4761259 hopper2 16 1514 2.5 9.0 5.8 2.4 1544 chr3R 4759715 intron,intron atms +,CG44098 - chr3R 4760487 intron,intron atms +,CG44098 - chr3R 4761259 intron,intron atms +,CG44098 - chr3R_16_4760001 chr3R_4760001 RAL-370 1844 chr3R 4769144 4769190 chr3R 4769242 4769288 18 94 5.0 5.0 5.0 3.0 144 chr3R 4769144 intron,intron atms +,CG44098 - chr3R 4769216 intron,intron atms +,CG44098 - chr3R 4769288 intron,intron atms +,CG44098 - chr3R_18_4765001 chr3R_4765001 RAL-370 1845 chr3R 4861561 4861593 chr3R 4861650 4861667 9 91 7.0 6.0 6.5 1.2 106 chr3R 4861561 intron opa + chr3R 4861614 intron opa + chr3R 4861667 intron opa + chr3R_9_4860001 chr3R_4860001 RAL-370 1846 chr3R 4887467 4887511 chr3R 4894860 4894906 rover 8 7391 2.0 2.0 2.0 2.7 7439 chr3R 4887467 intergenic not near genes chr3R 4891186 intergenic not near genes chr3R 4894906 intergenic not near genes chr3R_8_4890001 chr3R_4890001 RAL-370 1847 chr3R 4942122 4942160 chr3R 4942231 4942276 12 113 6.5 2.0 4.2 2.3 154 chr3R 4942122 intron Cdep + chr3R 4942199 intron Cdep + chr3R 4942276 intron Cdep + chr3R_12_4940001 chr3R_4940001 RAL-370 1848 chr3R 4948360 4948392 chr3R 4949002 4949033 12 641 19.5 24.5 22.0 0.5 673 chr3R 4948360 intergenic snRNA:U1:82Eb -,UbcD6 - chr3R 4948696 intergenic UbcD6 - chr3R 4949033 3` UTR UbcD6 - chr3R_12_4945001 chr3R_4945001 RAL-370 1849 chr3R 4965988 4966036 chr3R 4966097 4966148 18 110 3.0 0.5 1.8 6.4 160 chr3R 4965988 intron CG1124 + chr3R 4966068 intron CG1124 + chr3R 4966148 intron CG1124 + chr3R_18_4965001 chr3R_4965001 RAL-370 1850 chr3R 5067966 5068012 chr3R 5073497 5073549 mdg3 22 5536 5.5 3.5 4.5 4.0 5583 chr3R 5067966 intergenic not near genes chr3R 5070758 intergenic not near genes chr3R 5073549 intergenic not near genes chr3R_22_5070001 chr3R_5070001 RAL-370 1851 chr3R 5158123 5158171 chr3R 5158236 5158283 18 112 2.0 1.5 1.8 6.4 160 chr3R 5158123 intron dpr16 + chr3R 5158203 intron dpr16 + chr3R 5158283 intron dpr16 + chr3R_18_5155001 chr3R_5155001 RAL-370 1852 chr3R 5161941 5161963 chr3R 5162035 5162067 10 97 3.5 0.5 2.0 3.3 126 chr3R 5161941 intron dpr16 + chr3R 5162004 intron dpr16 + chr3R 5162067 intron dpr16 + chr3R_10_5160001 chr3R_5160001 RAL-370 1853 chr3R 5225150 5225189 chr3R 5225644 5225684 16 494 2.5 3.0 2.8 4.2 534 chr3R 5225150 3` UTR CG14664 + chr3R 5225417 3` UTR CG14664 + chr3R 5225684 intergenic CG14664 +,Vps37B + chr3R_16_5225001 chr3R_5225001 RAL-370 1854 chr3R 5278073 5278121 chr3R 5278174 5278220 23 99 5.0 8.0 6.5 3.1 147 chr3R 5278073 intron mtd - chr3R 5278146 intron mtd - chr3R 5278220 intron mtd - chr3R_23_5275001 chr3R_5275001 RAL-370 1855 chr3R 5338381 5338426 chr3R 5343578 5343623 Rt1c 12 5193 2.5 5.0 3.8 2.5 5242 chr3R 5338381 intron mtd - chr3R 5341002 intron mtd - chr3R 5343623 intron mtd - chr3R_12_5340001 chr3R_5340001 RAL-370 1856 chr3R 5351926 5351948 chr3R 5352902 5352926 6 976 30.5 16.5 23.5 0.2 1000 chr3R 5351926 intergenic not near genes chr3R 5352426 intergenic not near genes chr3R 5352926 intergenic not near genes chr3R_6_5350001 chr3R_5350001 RAL-370 1857 chr3R 5445940 5445988 chr3R 5452420 5452468 Burdock 17 6478 3.5 3.5 3.5 3.8 6528 chr3R 5445940 intron CG14669 + chr3R 5449204 intron CG14669 + chr3R 5452468 intron CG14669 + chr3R_17_5445001 chr3R_5445001 RAL-370 1858 chr3R 5471484 5471495 chr3R 5471603 5471610 4 118 7.0 4.0 5.5 0.6 126 chr3R 5471484 intron Snr1 + chr3R 5471547 intron Snr1 + chr3R 5471610 intron Snr1 + chr3R_4_5470001 chr3R_5470001 RAL-370 1859 chr3R 5471500 5471518 chr3R 5471591 5471637 6 113 3.5 4.0 3.8 1.2 137 chr3R 5471500 intron Snr1 + chr3R 5471568 intron Snr1 + chr3R 5471637 intron Snr1 + chr3R_6_5470001 chr3R_5470001 RAL-370 1860 chr3R 5681900 5681929 chr3R 5682002 5682036 15 105 3.0 4.0 3.5 3.3 136 chr3R 5681900 exon Rab23 - chr3R 5681968 intron Rab23 - chr3R 5682036 intron Rab23 - chr3R_15_5680001 chr3R_5680001 RAL-370 1861 chr3R 5726072 5726120 chr3R 5726254 5726302 13 182 3.0 4.5 3.8 2.7 230 chr3R 5726072 intergenic not near genes chr3R 5726187 intergenic not near genes chr3R 5726302 intergenic not near genes chr3R_13_5725001 chr3R_5725001 RAL-370 1862 chr3R 5746001 5746044 chr3R 5746260 5746305 pogo 16 260 1.0 6.5 3.8 3.3 304 chr3R 5746001 3` UTR Madm + chr3R 5746153 3` UTR Madm + chr3R 5746305 3` UTR Madm + chr3R_16_5745001 chr3R_5745001 RAL-370 1863 chr3R 5746997 5747016 chr3R 5753208 5753227 diver 4 6211 8.0 1.0 4.5 0.7 6230 chr3R 5746997 intergenic Madm + chr3R 5750112 intergenic not near genes chr3R 5753227 intergenic CG2091 - chr3R_4_5750001 chr3R_5750001 RAL-370 1864 chr3R 5747019 5747039 chr3R 5753200 5753250 diver 6 6200 4.0 1.0 2.5 1.7 6231 chr3R 5747019 intergenic Madm + chr3R 5750134 intergenic not near genes chr3R 5753250 intergenic CG2091 - chr3R_6_5750001 chr3R_5750001 RAL-370 1865 chr3R 5772368 5772409 chr3R 5772544 5772587 13 176 5.0 4.0 4.5 2.4 219 chr3R 5772368 intron CG2082 - chr3R 5772478 intron CG2082 - chr3R 5772587 intron CG2082 - chr3R_13_5770001 chr3R_5770001 RAL-370 1866 chr3R 5809095 5809142 chr3R 5809356 5809403 pogo 17 260 2.5 5.5 4.0 3.4 308 chr3R 5809095 3` UTR CG11000 + chr3R 5809249 3` UTR CG11000 + chr3R 5809403 3` UTR CG11000 + chr3R_17_5805001 chr3R_5805001 RAL-370 1867 chr3R 5896952 5896963 chr3R 5897330 5897342 6 377 11.5 5.0 8.2 0.7 390 chr3R 5896952 intron CG34113 - chr3R 5897147 intron CG34113 - chr3R 5897342 intron CG34113 - chr3R_6_5895001 chr3R_5895001 RAL-370 1868 chr3R 5896964 5896993 chr3R 5897329 5897372 8 372 7.5 5.0 6.2 1.1 408 chr3R 5896964 intron CG34113 - chr3R 5897168 intron CG34113 - chr3R 5897372 intron CG34113 - chr3R_8_5895001 chr3R_5895001 RAL-370 1869 chr3R 5927546 5927589 chr3R 5927803 5927816 pogo 15 252 5.0 6.5 5.8 2.2 270 chr3R 5927546 intron CG34113 - chr3R 5927681 intron CG34113 - chr3R 5927816 intron CG34113 - chr3R_15_5925001 chr3R_5925001 RAL-370 1870 chr3R 5988894 5988916 chr3R 5989115 5989137 6 221 4.0 1.0 2.5 1.7 243 chr3R 5988894 intergenic CR44927 + chr3R 5989016 intergenic CR44927 + chr3R 5989137 intergenic CR44927 + chr3R_6_5985001 chr3R_5985001 RAL-370 1871 chr3R 6117394 6117442 chr3R 6117535 6117541 12 130 6.0 6.5 6.2 1.7 147 chr3R 6117394 intergenic not near genes chr3R 6117468 intergenic not near genes chr3R 6117541 intergenic not near genes chr3R_12_6115001 chr3R_6115001 RAL-370 1872 chr3R 6121166 6121183 chr3R 6121404 6121421 BS 5 238 0.0 4.5 2.2 1.6 255 chr3R 6121166 intergenic not near genes chr3R 6121294 intergenic not near genes chr3R 6121421 intergenic not near genes chr3R_5_6120001 chr3R_6120001 RAL-370 1873 chr3R 6158492 6158530 chr3R 6167095 6167133 Tirant 6 8600 10.5 3.5 7.0 0.8 8641 chr3R 6158492 intergenic not near genes chr3R 6162812 intergenic not near genes chr3R 6167133 intergenic CG1077 + chr3R_6_6160001 chr3R_6160001 RAL-370 1874 chr3R 6428795 6428827 chr3R 6428913 6428949 9 121 4.0 2.5 3.2 2.1 154 chr3R 6428795 intron gpp + chr3R 6428872 intron gpp + chr3R 6428949 intron gpp + chr3R_9_6425001 chr3R_6425001 RAL-370 1875 chr3R 6461581 6461613 chr3R 6461681 6461713 5 100 2.0 1.5 1.8 1.8 132 chr3R 6461581 intergenic not near genes chr3R 6461647 intergenic not near genes chr3R 6461713 intergenic not near genes chr3R_5_6460001 chr3R_6460001 RAL-370 1876 chr3R 6510007 6510045 chr3R 6515108 6515145 jockey 11 5101 5.0 3.5 4.2 2.1 5138 chr3R 6510007 intergenic not near genes chr3R 6512576 intergenic not near genes chr3R 6515145 intergenic not near genes chr3R_11_6510001 chr3R_6510001 RAL-370 1877 chr3R 6579537 6579572 chr3R 6579633 6579666 4 88 4.5 6.0 5.2 0.6 129 chr3R 6579537 intron dpr11 - chr3R 6579602 intron dpr11 - chr3R 6579666 intron dpr11 - chr3R_4_6575001 chr3R_6575001 RAL-370 1878 chr3R 6689320 6689344 chr3R 6689422 6689445 5 101 8.0 4.5 6.2 0.7 125 chr3R 6689320 intergenic Ccp84Af - chr3R 6689382 intergenic Ccp84Af - chr3R 6689445 intergenic Ccp84Af - chr3R_5_6685001 chr3R_6685001 RAL-370 1879 chr3R 6689346 6689371 chr3R 6689418 6689473 7 96 4.0 3.5 3.8 1.5 127 chr3R 6689346 intergenic Ccp84Af - chr3R 6689410 intergenic Ccp84Af - chr3R 6689473 intergenic Ccp84Af - chr3R_7_6685001 chr3R_6685001 RAL-370 1880 chr3R 6705672 6705700 chr3R 6705916 6705944 6 244 0.0 2.5 1.2 2.7 272 chr3R 6705672 intergenic not near genes chr3R 6705808 intergenic not near genes chr3R 6705944 intergenic not near genes chr3R_6_6705001 chr3R_6705001 RAL-370 1881 chr3R 6737488 6737522 chr3R 6739295 6739329 Doc 12 1806 2.5 6.5 4.5 2.2 1841 chr3R 6737488 intron pb - chr3R 6738408 intron pb - chr3R 6739329 intron pb - chr3R_12_6735001 chr3R_6735001 RAL-370 1882 chr3R 6856364 6856393 chr3R 6856501 6856530 9 137 1.5 0.5 1.0 4.5 166 chr3R 6856364 intergenic not near genes chr3R 6856447 intergenic not near genes chr3R 6856530 intergenic not near genes chr3R_9_6855001 chr3R_6855001 RAL-370 1883 chr3R 6862200 6862248 chr3R 6862307 6862354 11 106 5.0 3.0 4.0 2.2 154 chr3R 6862200 intergenic not near genes chr3R 6862277 intergenic not near genes chr3R 6862354 intergenic not near genes chr3R_11_6860001 chr3R_6860001 RAL-370 1884 chr3R 6918053 6918089 chr3R 6918151 6918187 8 96 3.0 2.0 2.5 2.3 134 chr3R 6918053 intron Antp - chr3R 6918120 intron Antp - chr3R 6918187 intron Antp - chr3R_8_6915001 chr3R_6915001 RAL-370 1885 chr3R 6957457 6957479 chr3R 6958430 6958451 9 971 22.0 22.0 22.0 0.4 994 chr3R 6957457 intron Antp - chr3R 6957954 intron Antp - chr3R 6958451 intron Antp - chr3R_9_6955001 chr3R_6955001 RAL-370 1886 chr3R 6957481 6957502 chr3R 6958428 6958437 13 955 20.0 22.0 21.0 0.6 956 chr3R 6957481 intron Antp - chr3R 6957959 intron Antp - chr3R 6958437 intron Antp - chr3R_13_6955001 chr3R_6955001 RAL-370 1887 chr3R 6961167 6961192 chr3R 6961266 6961291 6 98 3.5 2.5 3.0 1.5 124 chr3R 6961167 intron Antp - chr3R 6961229 intron Antp - chr3R 6961291 intron Antp - chr3R_6_6960001 chr3R_6960001 RAL-370 1888 chr3R 7030683 7030730 chr3R 7030779 7030825 13 95 3.0 3.0 3.0 3.2 142 chr3R 7030683 intergenic not near genes chr3R 7030754 intergenic not near genes chr3R 7030825 intergenic not near genes chr3R_13_7030001 chr3R_7030001 RAL-370 1889 chr3R 7060237 7060281 chr3R 7060336 7060381 10 98 3.0 3.0 3.0 2.5 144 chr3R 7060237 3` UTR dj + chr3R 7060309 3` UTR dj + chr3R 7060381 3` UTR dj + chr3R_10_7060001 chr3R_7060001 RAL-370 1890 chr3R 7103911 7103961 chr3R 7104030 7104080 20 114 3.5 5.0 4.2 3.8 169 chr3R 7103911 intron Alh - chr3R 7103996 intron Alh - chr3R 7104080 intron Alh - chr3R_20_7100001 chr3R_7100001 RAL-370 1891 chr3R 7121726 7121736 chr3R 7121829 7121839 5 103 4.5 5.5 5.0 0.8 113 chr3R 7121726 exon Alh - chr3R 7121782 intron Alh - chr3R 7121839 intron Alh - chr3R_5_7120001 chr3R_7120001 RAL-370 1892 chr3R 7173661 7173706 chr3R 7173761 7173806 5 100 2.5 3.5 3.0 1.2 145 chr3R 7173661 intron sas + chr3R 7173734 intron sas + chr3R 7173806 intron sas + chr3R_5_7170001 chr3R_7170001 RAL-370 1893 chr3R 7198975 7199024 chr3R 7199079 7199130 12 102 1.5 2.0 1.8 4.3 155 chr3R 7198975 3` UTR lap + chr3R 7199052 3` UTR lap + chr3R 7199130 3` UTR lap + chr3R_12_7195001 chr3R_7195001 RAL-370 1894 chr3R 7205967 7205991 chr3R 7206075 7206099 9 107 8.0 3.5 5.8 1.3 132 chr3R 7205967 intergenic not near genes chr3R 7206033 intergenic not near genes chr3R 7206099 intergenic not near genes chr3R_9_7205001 chr3R_7205001 RAL-370 1895 chr3R 7205994 7206013 chr3R 7206073 7206121 7 98 4.0 3.0 3.5 1.6 127 chr3R 7205994 intergenic not near genes chr3R 7206058 intergenic not near genes chr3R 7206121 intergenic not near genes chr3R_7_7205001 chr3R_7205001 RAL-370 1896 chr3R 7272163 7272207 chr3R 7272270 7272305 4 98 3.0 6.5 4.8 0.7 142 chr3R 7272163 exon CG10032 + chr3R 7272234 intron CG10032 + chr3R 7272305 exon CG10032 + chr3R_4_7270001 chr3R_7270001 RAL-370 1897 chr3R 7276137 7276181 chr3R 7276381 7276425 5 241 2.0 3.0 2.5 1.4 288 chr3R 7276137 intron rn - chr3R 7276281 intron rn - chr3R 7276425 intron rn - chr3R_5_7275001 chr3R_7275001 RAL-370 1898 chr3R 7322210 7322236 chr3R 7322301 7322337 7 92 2.5 3.0 2.8 1.8 127 chr3R 7322210 intergenic not near genes chr3R 7322274 intergenic not near genes chr3R 7322337 intergenic not near genes chr3R_7_7320001 chr3R_7320001 RAL-370 1899 chr3R 7404945 7404972 chr3R 7405041 7405067 4 96 0.0 3.5 1.8 1.4 122 chr3R 7404945 intergenic not near genes chr3R 7405006 intergenic not near genes chr3R 7405067 intergenic not near genes chr3R_4_7405001 chr3R_7405001 RAL-370 1900 chr3R 7447988 7448005 chr3R 7448068 7448103 8 96 7.5 4.0 5.8 1.2 115 chr3R 7447988 intergenic not near genes chr3R 7448046 intergenic not near genes chr3R 7448103 intergenic not near genes chr3R_8_7445001 chr3R_7445001 RAL-370 1901 chr3R 7536724 7536724 chr3R 7536865 7536889 5 148 14.5 35.5 25.0 0.2 165 chr3R 7536724 3` UTR alpha-Est4 - chr3R 7536806 exon alpha-Est4 - chr3R 7536889 exon alpha-Est4 - chr3R_5_7535001 chr3R_7535001 RAL-370 1902 chr3R 7589778 7589827 chr3R 7589919 7589942 18 139 3.5 5.5 4.5 3.3 164 chr3R 7589778 intron CG34127 - chr3R 7589860 intron CG34127 - chr3R 7589942 intron CG34127 - chr3R_18_7585001 chr3R_7585001 RAL-370 1903 chr3R 7619958 7620001 chr3R 7620067 7620109 9 108 3.5 5.0 4.2 1.7 151 chr3R 7619958 intron CG34127 - chr3R 7620034 intron CG34127 - chr3R 7620109 intron CG34127 - chr3R_9_7620001 chr3R_7620001 RAL-370 1904 chr3R 7625283 7625313 chr3R 7625748 7625778 8 467 8.0 3.0 5.5 1.2 495 chr3R 7625283 intron CG34127 - chr3R 7625530 intron CG34127 - chr3R 7625778 intron CG34127 - chr3R_8_7625001 chr3R_7625001 RAL-370 1905 chr3R 7654983 7655036 chr3R 7655085 7655138 18 100 5.5 4.0 4.8 3.1 155 chr3R 7654983 intergenic not near genes chr3R 7655060 intergenic not near genes chr3R 7655138 intergenic not near genes chr3R_18_7655001 chr3R_7655001 RAL-370 1906 chr3R 7677899 7677909 chr3R 7678032 7678042 5 133 4.0 5.5 4.8 0.9 143 chr3R 7677899 intron Nlg1 + chr3R 7677970 intron Nlg1 + chr3R 7678042 intron Nlg1 + chr3R_5_7675001 chr3R_7675001 RAL-370 1907 chr3R 7677923 7677943 chr3R 7678028 7678076 9 126 2.5 5.5 4.0 1.8 153 chr3R 7677923 intron Nlg1 + chr3R 7678000 intron Nlg1 + chr3R 7678076 intron Nlg1 + chr3R_9_7675001 chr3R_7675001 RAL-370 1908 chr3R 7694563 7694605 chr3R 7713644 7713686 invader3 5 19080 2.0 3.0 2.5 1.4 19123 chr3R 7694563 3` UTR Nlg1 + chr3R 7704124 intergenic not near genes chr3R 7713686 intergenic not near genes chr3R_5_7700001 chr3R_7700001 RAL-370 1909 chr3R 7729445 7729492 chr3R 7737403 7737450 Stalker2 16 7958 4.0 5.5 4.8 2.8 8005 chr3R 7729445 intergenic not near genes chr3R 7733448 intergenic not near genes chr3R 7737450 intergenic not near genes chr3R_16_7730001 chr3R_7730001 RAL-370 1910 chr3R 7849624 7849675 chr3R 7850811 7850841 1360 10 1183 2.5 6.0 4.2 1.9 1217 chr3R 7849624 intron CG34384 + chr3R 7850232 intron CG34384 + chr3R 7850841 intron CG34384 + chr3R_10_7850001 chr3R_7850001 RAL-370 1911 chr3R 7973302 7973341 chr3R 7974384 7974422 1360 13 1082 3.5 4.0 3.8 2.7 1120 chr3R 7973302 intergenic not near genes chr3R 7973862 intergenic not near genes chr3R 7974422 3` UTR CD98hc - chr3R_13_7970001 chr3R_7970001 RAL-370 1912 chr3R 8090547 8090568 chr3R 8094044 8094064 297 6 3496 7.5 14.5 11.0 0.5 3517 chr3R 8090547 intergenic CR44330 + chr3R 8092306 intergenic not near genes chr3R 8094064 intergenic CG7900 + chr3R_6_8090001 chr3R_8090001 RAL-370 1913 chr3R 8094393 8094437 chr3R 8099718 8099761 Transpac 7 5325 3.0 5.0 4.0 1.4 5368 chr3R 8094393 intron CG7900 + chr3R 8097077 intron CG7900 + chr3R 8099761 intron CG7900 + chr3R_7_8095001 chr3R_8095001 RAL-370 1914 chr3R 8101776 8101790 chr3R 8104879 8104892 G2 5 3103 2.0 2.0 2.0 1.7 3116 chr3R 8101776 exon CG7900 + chr3R 8103334 intron CG7900 + chr3R 8104892 3` UTR CG7900 + chr3R_5_8100001 chr3R_8100001 RAL-370 1915 chr3R 8107368 8107419 chr3R 8107522 8107573 19 153 5.5 4.0 4.8 3.3 205 chr3R 8107368 intron puc + chr3R 8107470 intron puc + chr3R 8107573 intron puc + chr3R_19_8105001 chr3R_8105001 RAL-370 1916 chr3R 8207543 8207572 chr3R 8208404 8208434 F-element 4 861 4.5 3.5 4.0 0.8 891 chr3R 8207543 intergenic not near genes chr3R 8207988 intergenic not near genes chr3R 8208434 intergenic not near genes chr3R_4_8205001 chr3R_8205001 RAL-370 1917 chr3R 8284099 8284123 chr3R 8284190 8284227 9 96 4.0 2.0 3.0 2.2 128 chr3R 8284099 intergenic not near genes chr3R 8284163 intergenic not near genes chr3R 8284227 intergenic not near genes chr3R_9_8280001 chr3R_8280001 RAL-370 1918 chr3R 8339247 8339247 chr3R 21907534 21907536 7 13568288 16.0 28.5 22.2 0.3 13568289 chr3R 8339247 intergenic not near genes chr3R 15123392 intron CG42788 - chr3R 21907536 intergenic CG6678 + chr3R_7_15120001 chr3R_15120001 RAL-370 1919 chr3R 8376374 8376406 chr3R 8376751 8376783 9 378 36.0 24.5 30.2 0.3 409 chr3R 8376374 intron CG45263 - chr3R 8376578 intron CG45263 - chr3R 8376783 intron CG45263 - chr3R_9_8375001 chr3R_8375001 RAL-370 1920 chr3R 8393566 8393604 chr3R 8393666 8393708 12 100 1.0 3.0 2.0 4.0 142 chr3R 8393566 intron CG45263 - chr3R 8393637 intron CG45263 - chr3R 8393708 intron CG45263 - chr3R_12_8390001 chr3R_8390001 RAL-370 1921 chr3R 8403005 8403039 chr3R 8412176 8412198 roo 9 9172 2.5 3.5 3.0 2.2 9193 chr3R 8403005 intron CG45263 - chr3R 8407602 intron CG45263 - chr3R 8412198 intron CG45263 - chr3R_9_8405001 chr3R_8405001 RAL-370 1922 chr3R 8431131 8431144 chr3R 8431238 8431251 7 107 10.5 2.5 6.5 0.9 120 chr3R 8431131 intron CG45263 - chr3R 8431191 intron CG45263 - chr3R 8431251 intron CG45263 - chr3R_7_8430001 chr3R_8430001 RAL-370 1923 chr3R 8431160 8431180 chr3R 8431236 8431247 8 82 5.0 2.5 3.8 1.7 87 chr3R 8431160 intron CG45263 - chr3R 8431204 intron CG45263 - chr3R 8431247 intron CG45263 - chr3R_8_8430001 chr3R_8430001 RAL-370 1924 chr3R 8439497 8439535 chr3R 8439592 8439596 4 84 5.0 2.5 3.8 0.8 99 chr3R 8439497 intron CG45263 - chr3R 8439546 intron CG45263 - chr3R 8439596 intron CG45263 - chr3R_4_8435001 chr3R_8435001 RAL-370 1925 chr3R 8468166 8468203 chr3R 8468270 8468312 4 108 2.0 4.5 3.2 1.0 146 chr3R 8468166 intron CG45263 - chr3R 8468239 intron CG45263 - chr3R 8468312 intron CG45263 - chr3R_4_8465001 chr3R_8465001 RAL-370 1926 chr3R 8538339 8538367 chr3R 8538442 8538449 7 98 4.5 7.0 5.8 1.0 110 chr3R 8538339 intergenic not near genes chr3R 8538394 intergenic not near genes chr3R 8538449 intergenic not near genes chr3R_7_8535001 chr3R_8535001 RAL-370 1927 chr3R 8570478 8570510 chr3R 8575113 8575165 HMS-Beagle 14 4651 5.0 4.0 4.5 2.5 4687 chr3R 8570478 intergenic not near genes chr3R 8572822 intergenic not near genes chr3R 8575165 intergenic not near genes chr3R_14_8570001 chr3R_8570001 RAL-370 1928 chr3R 8575906 8575945 chr3R 8576009 8576031 6 100 7.0 6.0 6.5 0.8 125 chr3R 8575906 intergenic not near genes chr3R 8575968 intergenic not near genes chr3R 8576031 intergenic not near genes chr3R_6_8575001 chr3R_8575001 RAL-370 1929 chr3R 8601753 8601799 chr3R 8610926 8610969 roo 12 9167 4.0 2.5 3.2 2.9 9216 chr3R 8601753 intron 5-HT2B + chr3R 8606361 intron 5-HT2B + chr3R 8610969 intron 5-HT2B + chr3R_12_8605001 chr3R_8605001 RAL-370 1930 chr3R 8614801 8614820 chr3R 8614992 8615007 10 209 0.0 5.0 2.5 2.9 206 chr3R 8614801 intron 5-HT2B + chr3R 8614904 intron 5-HT2B + chr3R 8615007 intron 5-HT2B + chr3R_10_8610001 chr3R_8610001 RAL-370 1931 chr3R 8621528 8621554 chr3R 8621625 8621633 4 92 5.5 7.5 6.5 0.5 105 chr3R 8621528 intron 5-HT2B + chr3R 8621580 intron 5-HT2B + chr3R 8621633 intron 5-HT2B + chr3R_4_8620001 chr3R_8620001 RAL-370 1932 chr3R 8707338 8707387 chr3R 8709798 8709814 jockey 11 2454 2.5 5.0 3.8 2.3 2476 chr3R 8707338 intergenic not near genes chr3R 8708576 intergenic not near genes chr3R 8709814 intergenic not near genes chr3R_11_8705001 chr3R_8705001 RAL-370 1933 chr3R 8798631 8798682 chr3R 8798734 8798785 16 100 3.5 6.5 5.0 2.7 154 chr3R 8798631 intron,intron Pif1A -,Pif1B - chr3R 8798708 intron,intron Pif1A -,Pif1B - chr3R 8798785 intron,intron Pif1A -,Pif1B - chr3R_16_8795001 chr3R_8795001 RAL-370 1934 chr3R 8856354 8856393 chr3R 8856451 8856490 8 97 0.5 2.5 1.5 3.2 136 chr3R 8856354 intron pyd - chr3R 8856422 intron pyd - chr3R 8856490 intron pyd - chr3R_8_8855001 chr3R_8855001 RAL-370 1935 chr3R 8894853 8894903 chr3R 8896029 8896078 1360 20 1173 3.0 6.5 4.8 3.4 1225 chr3R 8894853 intron pyd - chr3R 8895466 intron pyd - chr3R 8896078 intron pyd - chr3R_20_8895001 chr3R_8895001 RAL-370 1936 chr3R 8917872 8917906 chr3R 8917970 8918006 15 99 2.5 5.5 4.0 3.0 134 chr3R 8917872 intron pyd - chr3R 8917939 intron pyd - chr3R 8918006 intron pyd - chr3R_15_8915001 chr3R_8915001 RAL-370 1937 chr3R 9101827 9101869 chr3R 9101944 9101987 11 117 4.0 6.0 5.0 1.8 160 chr3R 9101827 intron pum - chr3R 9101907 intron pum - chr3R 9101987 intron pum - chr3R_11_9100001 chr3R_9100001 RAL-370 1938 chr3R 9107192 9107222 chr3R 9107319 9107346 8 124 3.5 10.0 6.8 1.0 154 chr3R 9107192 intron pum - chr3R 9107269 intron pum - chr3R 9107346 intron pum - chr3R_8_9105001 chr3R_9105001 RAL-370 1939 chr3R 9108847 9108879 chr3R 9108943 9108975 9 96 4.5 3.0 3.8 1.9 128 chr3R 9108847 intron pum - chr3R 9108911 intron pum - chr3R 9108975 intron pum - chr3R_9_9105001 chr3R_9105001 RAL-370 1940 chr3R 9166515 9166558 chr3R 9166869 9166916 6 357 3.5 6.5 5.0 1.0 401 chr3R 9166515 intron pum - chr3R 9166716 intron pum - chr3R 9166916 intron pum - chr3R_6_9165001 chr3R_9165001 RAL-370 1941 chr3R 9192038 9192053 chr3R 9192143 9192157 5 103 6.0 2.5 4.2 1.0 119 chr3R 9192038 intron pum - chr3R 9192098 intron pum - chr3R 9192157 intron pum - chr3R_5_9190001 chr3R_9190001 RAL-370 1942 chr3R 9251415 9251455 chr3R 9251514 9251524 15 96 6.0 9.0 7.5 1.8 109 chr3R 9251415 3` UTR CG8420 + chr3R 9251470 intergenic CG8420 +,St2 + chr3R 9251524 intergenic CG8420 +,St2 + chr3R_15_9250001 chr3R_9250001 RAL-370 1943 chr3R 9278769 9278801 chr3R 9284045 9284081 Rt1a 8 5279 10.5 9.0 9.8 0.7 5312 chr3R 9278769 intergenic not near genes chr3R 9281425 intergenic not near genes chr3R 9284081 intergenic not near genes chr3R_8_9280001 chr3R_9280001 RAL-370 1944 chr3R 9319557 9319596 chr3R 9320012 9320051 jockey 16 454 7.5 5.5 6.5 2.1 494 chr3R 9319557 intron CG8861 - chr3R 9319804 intron CG8861 - chr3R 9320051 intron CG8861 - chr3R_16_9315001 chr3R_9315001 RAL-370 1945 chr3R 9350488 9350515 chr3R 9350589 9350615 10 101 6.5 6.0 6.2 1.4 127 chr3R 9350488 intron CG45050 + chr3R 9350552 intron CG45050 + chr3R 9350615 intron CG45050 + chr3R_10_9350001 chr3R_9350001 RAL-370 1946 chr3R 9361804 9361837 chr3R 9362064 9362097 pogo 6 258 5.0 3.5 4.2 1.2 293 chr3R 9361804 3` UTR CG45050 + chr3R 9361950 3` UTR CG45050 + chr3R 9362097 3` UTR CG45050 + chr3R_6_9360001 chr3R_9360001 RAL-370 1947 chr3R 9362956 9363001 chr3R 9363065 9363110 4 108 2.0 3.0 2.5 1.1 154 chr3R 9362956 3` UTR CG45050 + chr3R 9363033 intergenic CG45050 +,CG18473 + chr3R 9363110 intergenic CG45050 +,CG18473 + chr3R_4_9360001 chr3R_9360001 RAL-370 1948 chr3R 9379158 9379176 chr3R 9379260 9379278 5 101 0.0 3.5 1.8 1.8 120 chr3R 9379158 intron FER - chr3R 9379218 intron FER - chr3R 9379278 intron FER - chr3R_5_9375001 chr3R_9375001 RAL-370 1949 chr3R 9382799 9382849 chr3R 9382942 9382994 16 144 2.5 2.5 2.5 4.6 195 chr3R 9382799 intron FER - chr3R 9382896 intron FER - chr3R 9382994 intron FER - chr3R_16_9380001 chr3R_9380001 RAL-370 1950 chr3R 9500482 9500518 chr3R 9500564 9500616 10 92 0.5 4.5 2.5 2.9 134 chr3R 9500482 intron RhoL - chr3R 9500549 intron RhoL - chr3R 9500616 intron RhoL - chr3R_10_9500001 chr3R_9500001 RAL-370 1951 chr3R 9586680 9586724 chr3R 9586792 9586836 15 112 3.5 2.0 2.8 3.9 156 chr3R 9586680 intergenic CG8301 +,P58IPK + chr3R 9586758 intergenic CG8301 +,P58IPK + chr3R 9586836 intergenic P58IPK +,CG8301 + chr3R_15_9585001 chr3R_9585001 RAL-370 1952 chr3R 9610830 9610861 chr3R 9610993 9611023 6 161 2.5 5.0 3.8 1.2 193 chr3R 9610830 intron CG8312 + chr3R 9610926 intron CG8312 + chr3R 9611023 intron CG8312 + chr3R_6_9610001 chr3R_9610001 RAL-370 1953 chr3R 9615791 9615796 chr3R 9616276 9616284 4 487 5.0 16.0 10.5 0.3 493 chr3R 9615791 intron CG8312 + chr3R 9616038 intron CG8312 + chr3R 9616284 intron CG8312 + chr3R_4_9615001 chr3R_9615001 RAL-370 1954 chr3R 9644566 9644612 chr3R 9644667 9644713 18 101 3.0 4.5 3.8 3.8 147 chr3R 9644566 intron Dh44 + chr3R 9644640 intron Dh44 + chr3R 9644713 intron Dh44 + chr3R_18_9640001 chr3R_9640001 RAL-370 1955 chr3R 9836855 9836896 chr3R 9836959 9837004 12 105 4.0 3.5 3.8 2.5 149 chr3R 9836855 intron Teh1 - chr3R 9836930 intron Teh1 - chr3R 9837004 intron Teh1 - chr3R_12_9835001 chr3R_9835001 RAL-370 1956 chr3R 9885640 9885651 chr3R 9885744 9885755 6 104 6.0 12.5 9.2 0.6 115 chr3R 9885640 intron Glut4EF + chr3R 9885698 intron Glut4EF + chr3R 9885755 intron Glut4EF + chr3R_6_9885001 chr3R_9885001 RAL-370 1957 chr3R 9898768 9898819 chr3R 9898879 9898931 17 108 5.0 4.0 4.5 3.1 163 chr3R 9898768 intron Glut4EF + chr3R 9898850 intron Glut4EF + chr3R 9898931 intron Glut4EF + chr3R_17_9895001 chr3R_9895001 RAL-370 1958 chr3R 10174102 10174157 chr3R 10174204 10174212 21 99 2.5 4.5 3.5 4.7 110 chr3R 10174102 intron CG12814 - chr3R 10174157 intron CG12814 - chr3R 10174212 intron CG12814 - chr3R_21_10170001 chr3R_10170001 RAL-370 1959 chr3R 10231771 10231814 chr3R 10237368 10237406 mdg3 10 5596 2.5 4.5 3.5 2.2 5635 chr3R 10231771 intron CG42795 + chr3R 10234588 intron CG42795 + chr3R 10237406 intron CG42795 + chr3R_10_10230001 chr3R_10230001 RAL-370 1960 chr3R 10238003 10238048 chr3R 10238627 10238672 10 621 5.0 4.5 4.8 1.7 669 chr3R 10238003 intron CG42795 + chr3R 10238338 intron CG42795 + chr3R 10238672 intron CG42795 + chr3R_10_10235001 chr3R_10235001 RAL-370 1961 chr3R 10277132 10277139 chr3R 10277216 10277239 8 98 4.0 4.5 4.2 1.5 107 chr3R 10277132 intron CG43143 + chr3R 10277186 intron CG43143 + chr3R 10277239 intron CG43143 + chr3R_8_10275001 chr3R_10275001 RAL-370 1962 chr3R 10277143 10277163 chr3R 10277214 10277263 5 92 3.0 4.5 3.8 1.0 120 chr3R 10277143 intron CG43143 + chr3R 10277203 intron CG43143 + chr3R 10277263 intron CG43143 + chr3R_5_10275001 chr3R_10275001 RAL-370 1963 chr3R 10417501 10417505 chr3R 10417820 10417860 4 346 4.5 4.5 4.5 0.7 359 chr3R 10417501 intergenic not near genes chr3R 10417680 intergenic not near genes chr3R 10417860 intergenic not near genes chr3R_4_10415001 chr3R_10415001 RAL-370 1964 chr3R 6090420 6090421 chr3R 10451877 10451877 4 4361456 16.0 15.0 15.5 0.2 4361457 chr3R 6090420 intron Gasp - chr3R 8271148 intergenic not near genes chr3R 10451877 intergenic not near genes chr3R_4_8270001 chr3R_8270001 RAL-370 1965 chr3R 10531852 10531899 chr3R 10531953 10532000 8 100 3.0 0.0 1.5 3.2 148 chr3R 10531852 intron hth - chr3R 10531926 intron hth - chr3R 10532000 intron hth - chr3R_8_10530001 chr3R_10530001 RAL-370 1966 chr3R 10535321 10535342 chr3R 10535434 10535445 7 111 1.5 0.0 0.8 3.9 124 chr3R 10535321 intron hth - chr3R 10535383 intron hth - chr3R 10535445 intron hth - chr3R_7_10535001 chr3R_10535001 RAL-370 1967 chr3R 10593425 10593461 chr3R 10593531 10593565 6 104 1.0 10.0 5.5 0.9 140 chr3R 10593425 intron hth - chr3R 10593495 intron hth - chr3R 10593565 exon hth - chr3R_6_10590001 chr3R_10590001 RAL-370 1968 chr3R 10646086 10646127 chr3R 10646257 10646298 14 171 7.5 5.0 6.2 1.9 212 chr3R 10646086 intergenic CR44018 + chr3R 10646192 intergenic CR44018 + chr3R 10646298 intergenic not near genes chr3R_14_10645001 chr3R_10645001 RAL-370 1969 chr3R 10683538 10683555 chr3R 10683667 10683673 5 129 9.5 1.5 5.5 0.8 135 chr3R 10683538 intron CR44230 + chr3R 10683606 intron CR44230 + chr3R 10683673 intron CR44230 + chr3R_5_10680001 chr3R_10680001 RAL-370 1970 chr3R 10683556 10683586 chr3R 10683666 10683719 12 123 4.5 1.5 3.0 3.0 163 chr3R 10683556 intron CR44230 + chr3R 10683638 intron CR44230 + chr3R 10683719 5` UTR CR44230 + chr3R_12_10680001 chr3R_10680001 RAL-370 1971 chr3R 10730460 10730500 chr3R 10730575 10730615 19 113 2.5 5.0 3.8 4.0 155 chr3R 10730460 intergenic not near genes chr3R 10730538 intergenic not near genes chr3R 10730615 intergenic not near genes chr3R_19_10730001 chr3R_10730001 RAL-370 1972 chr3R 10730978 10731024 chr3R 10731163 10731191 19 184 1.5 4.5 3.0 4.8 213 chr3R 10730978 intergenic not near genes chr3R 10731084 intergenic not near genes chr3R 10731191 intergenic not near genes chr3R_19_10730001 chr3R_10730001 RAL-370 1973 chr3R 10737549 10737592 chr3R 10737933 10737978 10 386 3.0 2.0 2.5 2.9 429 chr3R 10737549 intergenic TkR86C - chr3R 10737764 3` UTR TkR86C - chr3R 10737978 3` UTR TkR86C - chr3R_10_10735001 chr3R_10735001 RAL-370 1974 chr3R 10759470 10759509 chr3R 10759569 10759593 11 97 2.5 3.5 3.0 2.8 123 chr3R 10759470 intergenic CG31272 - chr3R 10759532 intergenic CG31272 - chr3R 10759593 intergenic CG31272 -,MED7 - chr3R_11_10755001 chr3R_10755001 RAL-370 1975 chr3R 10785796 10785835 chr3R 10785895 10785934 14 99 6.5 1.0 3.8 2.9 138 chr3R 10785796 intron Rbp1 + chr3R 10785865 intron Rbp1 + chr3R 10785934 intron Rbp1 + chr3R_14_10785001 chr3R_10785001 RAL-370 1976 chr3R 10919683 10919717 chr3R 10919770 10919815 11 94 4.5 6.0 5.2 1.8 132 chr3R 10919683 intergenic not near genes chr3R 10919749 intergenic not near genes chr3R 10919815 intergenic not near genes chr3R_11_10915001 chr3R_10915001 RAL-370 1977 chr3R 10920040 10920057 chr3R 10920136 10920155 7 97 4.5 7.0 5.8 1.0 115 chr3R 10920040 intergenic not near genes chr3R 10920098 intergenic not near genes chr3R 10920155 intergenic not near genes chr3R_7_10920001 chr3R_10920001 RAL-370 1978 chr3R 10944235 10944264 chr3R 10944317 10944374 11 106 2.0 2.5 2.2 3.4 139 chr3R 10944235 intergenic not near genes chr3R 10944304 intergenic not near genes chr3R 10944374 intergenic not near genes chr3R_11_10940001 chr3R_10940001 RAL-370 1979 chr3R 11085462 11085490 chr3R 11085559 11085562 10 94 2.5 4.5 3.5 2.2 100 chr3R 11085462 3` UTR CR44940 - chr3R 11085512 intergenic CR44940 - chr3R 11085562 intergenic CR44940 - chr3R_10_11085001 chr3R_11085001 RAL-370 1980 chr3R 11085765 11085799 chr3R 11086080 11086114 11 314 2.0 6.0 4.0 2.2 349 chr3R 11085765 intergenic CR44940 - chr3R 11085940 intergenic CR44940 - chr3R 11086114 intergenic not near genes chr3R_11_11085001 chr3R_11085001 RAL-370 1981 chr3R 11087976 11087985 chr3R 11088236 11088237 4 275 3.0 2.5 2.8 1.1 261 chr3R 11087976 intergenic CG43449 + chr3R 11088106 intergenic CG43449 + chr3R 11088237 intergenic CG43449 + chr3R_4_11085001 chr3R_11085001 RAL-370 1982 chr3R 11102306 11102354 chr3R 11102407 11102424 8 88 3.0 4.5 3.8 1.7 118 chr3R 11102306 intergenic not near genes chr3R 11102365 intergenic not near genes chr3R 11102424 intergenic not near genes chr3R_8_11100001 chr3R_11100001 RAL-370 1983 chr3R 11130104 11130143 chr3R 11130213 11130252 9 107 4.0 0.0 2.0 3.0 148 chr3R 11130104 intergenic not near genes chr3R 11130178 intergenic not near genes chr3R 11130252 intergenic not near genes chr3R_9_11130001 chr3R_11130001 RAL-370 1984 chr3R 11174571 11174609 chr3R 11175305 11175338 6 731 17.5 21.0 19.2 0.3 767 chr3R 11174571 exon Ugt86Dj - chr3R 11174954 intron Ugt86Dj - chr3R 11175338 exon Ugt86Dj - chr3R_6_11170001 chr3R_11170001 RAL-370 1985 chr3R 11258845 11258884 chr3R 11259281 11259323 15 437 3.5 5.0 4.2 2.9 478 chr3R 11258845 intergenic not near genes chr3R 11259084 intergenic not near genes chr3R 11259323 intergenic not near genes chr3R_15_11255001 chr3R_11255001 RAL-370 1986 chr3R 11263378 11263419 chr3R 11263482 11263523 15 103 5.5 4.0 4.8 2.6 145 chr3R 11263378 intergenic not near genes chr3R 11263450 intergenic not near genes chr3R 11263523 intergenic not near genes chr3R_15_11260001 chr3R_11260001 RAL-370 1987 chr3R 11294446 11294499 chr3R 11294777 11294826 18 328 2.0 3.5 2.8 4.7 380 chr3R 11294446 intron CR31386 - chr3R 11294636 intron CR31386 - chr3R 11294826 intron CR31386 - chr3R_18_11290001 chr3R_11290001 RAL-370 1988 chr3R 11379219 11379241 chr3R 11388394 11388414 roo 4 9174 8.5 3.5 6.0 0.6 9195 chr3R 11379219 intron pros + chr3R 11383816 intron pros + chr3R 11388414 intron pros + chr3R_4_11380001 chr3R_11380001 RAL-370 1989 chr3R 11379244 11379255 chr3R 11388390 11388430 roo 8 9167 7.0 3.0 5.0 1.3 9186 chr3R 11379244 intron pros + chr3R 11383837 intron pros + chr3R 11388430 intron pros + chr3R_8_11380001 chr3R_11380001 RAL-370 1990 chr3R 11406272 11406316 chr3R 11406369 11406412 13 96 3.0 1.5 2.2 4.1 140 chr3R 11406272 3` UTR pros + chr3R 11406342 3` UTR pros + chr3R 11406412 3` UTR pros + chr3R_13_11405001 chr3R_11405001 RAL-370 1991 chr3R 11443681 11443695 chr3R 11443780 11443806 4 108 5.0 3.0 4.0 0.8 125 chr3R 11443681 intron,intron sals -,CG17230 + chr3R 11443744 intron,intron sals -,CG17230 + chr3R 11443806 intron,intron sals -,CG17230 + chr3R_4_11440001 chr3R_11440001 RAL-370 1992 chr3R 11443700 11443710 chr3R 11443773 11443822 5 104 3.0 2.5 2.8 1.3 122 chr3R 11443700 intron,intron sals -,CG17230 + chr3R 11443761 intron,intron sals -,CG17230 + chr3R 11443822 intron,intron sals -,CG17230 + chr3R_5_11440001 chr3R_11440001 RAL-370 1993 chr3R 11486389 11486405 chr3R 11486546 11486562 6 156 3.5 9.0 6.2 0.8 173 chr3R 11486389 intergenic CR45581 + chr3R 11486476 intergenic CR45581 + chr3R 11486562 intergenic CR45581 + chr3R_6_11485001 chr3R_11485001 RAL-370 1994 chr3R 11513836 11513847 chr3R 11513931 11513950 4 98 2.5 4.5 3.5 0.9 114 chr3R 11513836 intergenic not near genes chr3R 11513893 intergenic not near genes chr3R 11513950 intergenic not near genes chr3R_4_11510001 chr3R_11510001 RAL-370 1995 chr3R 11513852 11513877 chr3R 11513928 11513953 5 90 1.0 4.0 2.5 1.4 101 chr3R 11513852 intergenic not near genes chr3R 11513902 intergenic not near genes chr3R 11513953 intergenic not near genes chr3R_5_11510001 chr3R_11510001 RAL-370 1996 chr3R 11518797 11518844 chr3R 11518908 11518954 14 108 4.0 8.0 6.0 2.0 157 chr3R 11518797 intergenic not near genes chr3R 11518876 intergenic not near genes chr3R 11518954 intergenic not near genes chr3R_14_11515001 chr3R_11515001 RAL-370 1997 chr3R 11663085 11663101 chr3R 11663171 11663197 7 92 3.5 6.5 5.0 1.2 112 chr3R 11663085 intron CG42327 + chr3R 11663141 intron CG42327 + chr3R 11663197 intron CG42327 + chr3R_7_11660001 chr3R_11660001 RAL-370 1998 chr3R 11665920 11665958 chr3R 11666091 11666129 5 171 4.0 2.0 3.0 1.2 209 chr3R 11665920 intron CG42327 + chr3R 11666024 intron CG42327 + chr3R 11666129 intron CG42327 + chr3R_5_11665001 chr3R_11665001 RAL-370 1999 chr3R 11694706 11694751 chr3R 11694819 11694863 12 113 1.5 4.5 3.0 3.0 157 chr3R 11694706 intergenic Fer3 - chr3R 11694784 intergenic Fer3 - chr3R 11694863 intergenic not near genes chr3R_12_11690001 chr3R_11690001 RAL-370 2000 chr3R 11734141 11734190 chr3R 11734280 11734321 14 130 3.0 4.5 3.8 2.9 180 chr3R 11734141 intergenic not near genes chr3R 11734231 intergenic not near genes chr3R 11734321 intergenic not near genes chr3R_14_11730001 chr3R_11730001 RAL-370 2001 chr3R 11841067 11841092 chr3R 11846252 11846287 BS 7 5195 4.0 5.5 4.8 1.2 5220 chr3R 11841067 intron CG6959 - chr3R 11843677 intron CG6959 - chr3R 11846287 intron CG6959 - chr3R_7_11840001 chr3R_11840001 RAL-370 2002 chr3R 11900082 11900110 chr3R 11900175 11900178 7 90 4.0 5.0 4.5 1.3 96 chr3R 11900082 exon Cad87A - chr3R 11900130 exon Cad87A - chr3R 11900178 exon Cad87A - chr3R_7_11900001 chr3R_11900001 RAL-370 2003 chr3R 11919284 11919338 chr3R 11919391 11919416 11 92 5.0 4.5 4.8 1.9 132 chr3R 11919284 intron Cad87A - chr3R 11919350 intron Cad87A - chr3R 11919416 intron Cad87A - chr3R_11_11915001 chr3R_11915001 RAL-370 2004 chr3R 11930220 11930269 chr3R 11930321 11930373 18 99 5.5 4.0 4.8 3.1 153 chr3R 11930220 intron Cad87A - chr3R 11930296 intron Cad87A - chr3R 11930373 intron Cad87A - chr3R_18_11930001 chr3R_11930001 RAL-370 2005 chr3R 11943174 11943215 chr3R 11943546 11943582 10 367 3.5 1.0 2.2 3.1 408 chr3R 11943174 intron Cad87A - chr3R 11943378 intron Cad87A - chr3R 11943582 intron Cad87A - chr3R_10_11940001 chr3R_11940001 RAL-370 2006 chr3R 11945365 11945405 chr3R 11945483 11945515 8 117 3.5 5.0 4.2 1.5 150 chr3R 11945365 intron Cad87A - chr3R 11945440 intron Cad87A - chr3R 11945515 intron Cad87A - chr3R_8_11945001 chr3R_11945001 RAL-370 2007 chr3R 11957837 11957873 chr3R 11958140 11958160 S-element 9 301 3.0 0.0 1.5 3.6 323 chr3R 11957837 intergenic not near genes chr3R 11957998 intergenic not near genes chr3R 11958160 intergenic not near genes chr3R_9_11955001 chr3R_11955001 RAL-370 2008 chr3R 12022869 12022889 chr3R 12025066 12025086 pogo 6 2197 9.0 3.0 6.0 0.9 2217 chr3R 12022869 intergenic not near genes chr3R 12023978 intergenic not near genes chr3R 12025086 intergenic not near genes chr3R_6_12020001 chr3R_12020001 RAL-370 2009 chr3R 12022891 12022916 chr3R 12025064 12025113 pogo 9 2194 5.5 2.5 4.0 1.8 2222 chr3R 12022891 intergenic not near genes chr3R 12024002 intergenic not near genes chr3R 12025113 intergenic not near genes chr3R_9_12020001 chr3R_12020001 RAL-370 2010 chr3R 12080848 12080898 chr3R 12080945 12080996 15 95 3.5 5.0 4.2 2.9 148 chr3R 12080848 intron CG14741 - chr3R 12080922 intron CG14741 - chr3R 12080996 intron CG14741 - chr3R_15_12080001 chr3R_12080001 RAL-370 2011 chr3R 12111872 12111913 chr3R 12111968 12112009 11 96 4.0 6.0 5.0 1.8 137 chr3R 12111872 intergenic dpr17 + chr3R 12111940 intergenic not near genes chr3R 12112009 intergenic not near genes chr3R_11_12110001 chr3R_12110001 RAL-370 2012 chr3R 12112347 12112367 chr3R 12112432 12112440 4 97 2.0 3.0 2.5 1.1 93 chr3R 12112347 intergenic not near genes chr3R 12112394 intergenic not near genes chr3R 12112440 intergenic not near genes chr3R_4_12110001 chr3R_12110001 RAL-370 2013 chr3R 12116323 12116377 chr3R 12116524 12116577 16 199 4.5 6.0 5.2 2.6 254 chr3R 12116323 intergenic not near genes chr3R 12116450 intergenic not near genes chr3R 12116577 intergenic not near genes chr3R_16_12115001 chr3R_12115001 RAL-370 2014 chr3R 12117502 12117547 chr3R 12117910 12117941 12 403 2.0 4.5 3.2 2.9 439 chr3R 12117502 intergenic not near genes chr3R 12117722 intergenic not near genes chr3R 12117941 intergenic not near genes chr3R_12_12115001 chr3R_12115001 RAL-370 2015 chr3R 12119864 12119907 chr3R 12119978 12120020 7 105 4.5 2.5 3.5 1.6 156 chr3R 12119864 intergenic not near genes chr3R 12119942 intergenic not near genes chr3R 12120020 intergenic not near genes chr3R_7_12115001 chr3R_12115001 RAL-370 2016 chr3R 12165848 12165897 chr3R 12165945 12165995 13 98 2.5 2.5 2.5 3.7 147 chr3R 12165848 intron Cpn - chr3R 12165922 intron Cpn - chr3R 12165995 intron Cpn - chr3R_13_12165001 chr3R_12165001 RAL-370 2017 chr3R 12214347 12214370 chr3R 12214438 12214481 7 99 4.0 4.0 4.0 1.4 134 chr3R 12214347 3` UTR CG4848 - chr3R 12214414 3` UTR CG4848 - chr3R 12214481 3` UTR CG4848 - chr3R_7_12210001 chr3R_12210001 RAL-370 2018 chr3R 12252253 12252299 chr3R 12252357 12252400 12 98 5.0 7.5 6.2 1.7 147 chr3R 12252253 intergenic not near genes chr3R 12252326 intergenic not near genes chr3R 12252400 intergenic not near genes chr3R_12_12250001 chr3R_12250001 RAL-370 2019 chr3R 12273944 12273988 chr3R 12274285 12274334 13 337 6.5 5.0 5.8 1.9 390 chr3R 12273944 intron svp + chr3R 12274139 intron svp + chr3R 12274334 intron svp + chr3R_13_12270001 chr3R_12270001 RAL-370 2020 chr3R 12314224 12314251 chr3R 12314340 12314385 14 131 9.0 6.0 7.5 1.6 161 chr3R 12314224 intergenic not near genes chr3R 12314304 intergenic not near genes chr3R 12314385 intergenic not near genes chr3R_14_12310001 chr3R_12310001 RAL-370 2021 chr3R 12344109 12344151 chr3R 12344206 12344247 17 95 3.0 1.5 2.2 5.3 138 chr3R 12344109 intergenic not near genes chr3R 12344178 intergenic not near genes chr3R 12344247 intergenic not near genes chr3R_17_12340001 chr3R_12340001 RAL-370 2022 chr3R 12392877 12392889 chr3R 12392994 12393008 4 118 13.0 15.0 14.0 0.3 131 chr3R 12392877 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12392942 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R 12393008 intron,5` UTR,3` UTR CG34402 +,CG10096 -,CG10097 - chr3R_4_12390001 chr3R_12390001 RAL-370 2023 chr3R 12546439 12546475 chr3R 12546541 12546578 17 103 9.5 7.0 8.2 1.8 139 chr3R 12546439 intron Octbeta3R - chr3R 12546508 intron Octbeta3R - chr3R 12546578 intron Octbeta3R - chr3R_17_12545001 chr3R_12545001 RAL-370 2024 chr3R 12599363 12599404 chr3R 12599466 12599505 10 102 4.0 3.5 3.8 2.1 142 chr3R 12599363 intergenic not near genes chr3R 12599434 intergenic not near genes chr3R 12599505 intergenic not near genes chr3R_10_12595001 chr3R_12595001 RAL-370 2025 chr3R 12666770 12666795 chr3R 12666902 12666941 13 141 7.0 6.5 6.8 1.7 171 chr3R 12666770 intron CG14395 + chr3R 12666856 intron CG14395 + chr3R 12666941 intron CG14395 + chr3R_13_12665001 chr3R_12665001 RAL-370 2026 chr3R 12706469 12706493 chr3R 12715761 12715785 6 9293 35.0 41.0 38.0 0.2 9316 chr3R 12706469 exon mus308 - chr3R 12711127 exon mus308 - chr3R 12715785 intron Men - chr3R_6_12710001 chr3R_12710001 RAL-370 2027 chr3R 12706466 12706515 chr3R 12715792 12715807 5 9311 39.0 38.0 38.5 0.1 9341 chr3R 12706466 exon mus308 - chr3R 12711136 exon mus308 - chr3R 12715807 intron Men - chr3R_5_12710001 chr3R_12710001 RAL-370 2028 chr3R 12716938 12716992 chr3R 12717214 12717266 17 267 6.0 2.0 4.0 3.4 328 chr3R 12716938 intron Men - chr3R 12717102 intron Men - chr3R 12717266 intron Men - chr3R_17_12715001 chr3R_12715001 RAL-370 2029 chr3R 12733456 12733508 chr3R 12733552 12733605 15 86 5.0 5.0 5.0 2.5 149 chr3R 12733456 intergenic not near genes chr3R 12733530 intergenic not near genes chr3R 12733605 intergenic not near genes chr3R_15_12730001 chr3R_12730001 RAL-370 2030 chr3R 12735162 12735177 chr3R 12735432 12735447 9 270 4.0 7.0 5.5 1.4 285 chr3R 12735162 intergenic not near genes chr3R 12735304 intergenic not near genes chr3R 12735447 intergenic not near genes chr3R_9_12735001 chr3R_12735001 RAL-370 2031 chr3R 12763123 12763152 chr3R 12763220 12763249 10 97 0.0 4.5 2.2 3.1 126 chr3R 12763123 intron beat-Vc - chr3R 12763186 intron beat-Vc - chr3R 12763249 intron beat-Vc - chr3R_10_12760001 chr3R_12760001 RAL-370 2032 chr3R 12766072 12766103 chr3R 12766213 12766247 6 142 3.5 2.5 3.0 1.5 175 chr3R 12766072 intron beat-Vc - chr3R 12766160 intron beat-Vc - chr3R 12766247 intron beat-Vc - chr3R_6_12765001 chr3R_12765001 RAL-370 2033 chr3R 12786437 12786484 chr3R 12786817 12786862 12 377 5.0 9.0 7.0 1.5 425 chr3R 12786437 intergenic not near genes chr3R 12786650 intergenic not near genes chr3R 12786862 intergenic not near genes chr3R_12_12785001 chr3R_12785001 RAL-370 2034 chr3R 12814221 12814268 chr3R 12814318 12814329 15 93 3.5 3.5 3.5 3.3 108 chr3R 12814221 intron CG31345 - chr3R 12814275 intron CG31345 - chr3R 12814329 intron CG31345 - chr3R_15_12810001 chr3R_12810001 RAL-370 2035 chr3R 12866470 12866520 chr3R 12866641 12866691 19 169 3.0 3.0 3.0 4.8 221 chr3R 12866470 intergenic not near genes chr3R 12866580 intergenic not near genes chr3R 12866691 intergenic not near genes chr3R_19_12865001 chr3R_12865001 RAL-370 2036 chr3R 12920147 12920183 chr3R 12925369 12925404 copia 11 5220 2.5 6.0 4.2 2.1 5257 chr3R 12920147 intron beat-Vb + chr3R 12922776 intron beat-Vb + chr3R 12925404 intron beat-Vb + chr3R_11_12920001 chr3R_12920001 RAL-370 2037 chr3R 12943959 12944009 chr3R 12944062 12944105 13 106 2.0 5.5 3.8 2.7 146 chr3R 12943959 intergenic not near genes chr3R 12944032 intergenic not near genes chr3R 12944105 intergenic not near genes chr3R_13_12940001 chr3R_12940001 RAL-370 2038 chr3R 12952287 12952315 chr3R 12952408 12952439 12 130 5.5 2.5 4.0 2.4 152 chr3R 12952287 intron grsm - chr3R 12952363 intron grsm - chr3R 12952439 intron grsm - chr3R_12_12950001 chr3R_12950001 RAL-370 2039 chr3R 12972536 12972580 chr3R 12972694 12972739 11 159 2.5 3.5 3.0 2.8 203 chr3R 12972536 intron CG7381 - chr3R 12972638 intron CG7381 - chr3R 12972739 intron CG7381 - chr3R_11_12970001 chr3R_12970001 RAL-370 2040 chr3R 13037959 13037986 chr3R 13038128 13038145 5 167 1.0 0.0 0.5 3.3 186 chr3R 13037959 3` UTR ry + chr3R 13038052 intergenic ry +,CG11668 + chr3R 13038145 intergenic ry +,CG11668 + chr3R_5_13035001 chr3R_13035001 RAL-370 2041 chr3R 13059944 13059969 chr3R 13060159 13060184 7 212 5.0 6.0 5.5 1.1 240 chr3R 13059944 intron sim + chr3R 13060064 intron sim + chr3R 13060184 intron sim + chr3R_7_13060001 chr3R_13060001 RAL-370 2042 chr3R 13066990 13067007 chr3R 13067097 13067106 4 104 3.0 4.5 3.8 0.8 116 chr3R 13066990 intron sim + chr3R 13067048 intron sim + chr3R 13067106 intron sim + chr3R_4_13065001 chr3R_13065001 RAL-370 2043 chr3R 13073956 13074007 chr3R 13074055 13074075 10 96 1.5 1.0 1.2 4.5 119 chr3R 13073956 intron sim + chr3R 13074016 intron sim + chr3R 13074075 intron sim + chr3R_10_13070001 chr3R_13070001 RAL-370 2044 chr3R 13075347 13075377 chr3R 13075448 13075478 11 100 4.0 4.0 4.0 2.2 131 chr3R 13075347 intron sim + chr3R 13075412 intron sim + chr3R 13075478 intron sim + chr3R_11_13075001 chr3R_13075001 RAL-370 2045 chr3R 13135816 13135852 chr3R 13138001 13138037 pogo 7 2185 1.5 4.5 3.0 1.8 2221 chr3R 13135816 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13136926 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13138037 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_7_13135001 chr3R_13135001 RAL-370 2046 chr3R 13143023 13143065 chr3R 13148619 13148624 mdg3 16 5584 3.5 5.0 4.2 3.1 5601 chr3R 13143023 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13145824 intron,intron,intron timeout +,2mit -,CR45109 - chr3R 13148624 intron,intron,intron timeout +,2mit -,CR45109 - chr3R_16_13145001 chr3R_13145001 RAL-370 2047 chr3R 13195939 13195953 chr3R 13196053 13196068 8 113 8.5 2.0 5.2 1.3 129 chr3R 13195939 intergenic not near genes chr3R 13196004 intergenic not near genes chr3R 13196068 intergenic not near genes chr3R_8_13195001 chr3R_13195001 RAL-370 2048 chr3R 13195954 13195984 chr3R 13196048 13196073 12 105 3.5 2.0 2.8 3.2 119 chr3R 13195954 intergenic not near genes chr3R 13196014 intergenic not near genes chr3R 13196073 intergenic not near genes chr3R_12_13195001 chr3R_13195001 RAL-370 2049 chr3R 13260708 13260744 chr3R 13260859 13260895 9 151 5.0 5.0 5.0 1.5 187 chr3R 13260708 intron CG11686 + chr3R 13260802 intron CG11686 + chr3R 13260895 intron CG11686 + chr3R_9_13260001 chr3R_13260001 RAL-370 2050 chr3R 13272037 13272078 chr3R 13272139 13272183 8 104 4.5 3.0 3.8 1.7 146 chr3R 13272037 intergenic CG8449 - chr3R 13272110 intergenic CG8449 - chr3R 13272183 intergenic CG8449 - chr3R_8_13270001 chr3R_13270001 RAL-370 2051 chr3R 13274199 13274229 chr3R 13274294 13274328 12 98 7.0 6.5 6.8 1.5 129 chr3R 13274199 intergenic not near genes chr3R 13274264 intergenic not near genes chr3R 13274328 intergenic not near genes chr3R_12_13270001 chr3R_13270001 RAL-370 2052 chr3R 13274230 13274247 chr3R 13274292 13274346 9 86 5.0 6.0 5.5 1.4 116 chr3R 13274230 intergenic not near genes chr3R 13274288 intergenic not near genes chr3R 13274346 intergenic not near genes chr3R_9_13270001 chr3R_13270001 RAL-370 2053 chr3R 13305638 13305676 chr3R 13305745 13305783 8 107 3.0 5.0 4.0 1.6 145 chr3R 13305638 intron CG32473 + chr3R 13305710 intron CG32473 + chr3R 13305783 intron CG32473 + chr3R_8_13305001 chr3R_13305001 RAL-370 2054 chr3R 13306102 13306152 chr3R 13306508 13306556 17 404 5.5 3.5 4.5 3.1 454 chr3R 13306102 intron CG32473 + chr3R 13306329 intron CG32473 + chr3R 13306556 intron CG32473 + chr3R_17_13305001 chr3R_13305001 RAL-370 2055 chr3R 13323936 13323988 chr3R 13324066 13324110 16 125 3.0 3.5 3.2 3.8 174 chr3R 13323936 intergenic not near genes chr3R 13324023 intergenic not near genes chr3R 13324110 intergenic not near genes chr3R_16_13320001 chr3R_13320001 RAL-370 2056 chr3R 13326916 13326958 chr3R 13327031 13327073 9 110 6.5 2.5 4.5 1.6 157 chr3R 13326916 intergenic not near genes chr3R 13326994 intergenic not near genes chr3R 13327073 intergenic not near genes chr3R_9_13325001 chr3R_13325001 RAL-370 2057 chr3R 13356078 13356118 chr3R 13356183 13356222 8 105 2.0 2.5 2.2 2.5 144 chr3R 13356078 intergenic not near genes chr3R 13356150 intergenic not near genes chr3R 13356222 intergenic not near genes chr3R_8_13355001 chr3R_13355001 RAL-370 2058 chr3R 13441044 13441071 chr3R 13441319 13441354 15 280 5.5 4.0 4.8 2.6 310 chr3R 13441044 intergenic not near genes chr3R 13441199 intergenic not near genes chr3R 13441354 intergenic not near genes chr3R_15_13440001 chr3R_13440001 RAL-370 2059 chr3R 13554128 13554169 chr3R 13554226 13554260 7 89 6.5 5.5 6.0 1.0 132 chr3R 13554128 intergenic not near genes chr3R 13554194 intergenic not near genes chr3R 13554260 intergenic not near genes chr3R_7_13550001 chr3R_13550001 RAL-370 2060 chr3R 13567415 13567468 chr3R 13567516 13567567 8 100 3.0 4.0 3.5 1.8 152 chr3R 13567415 intergenic not near genes chr3R 13567491 intergenic not near genes chr3R 13567567 intergenic not near genes chr3R_8_13565001 chr3R_13565001 RAL-370 2061 chr3R 13599065 13599085 chr3R 13599136 13599185 5 94 2.5 2.0 2.2 1.6 120 chr3R 13599065 intergenic not near genes chr3R 13599125 intergenic not near genes chr3R 13599185 intergenic not near genes chr3R_5_13595001 chr3R_13595001 RAL-370 2062 chr3R 13603034 13603073 chr3R 13603145 13603184 13 111 5.5 3.0 4.2 2.5 150 chr3R 13603034 intergenic not near genes chr3R 13603109 intergenic not near genes chr3R 13603184 intergenic not near genes chr3R_13_13600001 chr3R_13600001 RAL-370 2063 chr3R 13647610 13647648 chr3R 13647708 13647745 9 97 3.5 4.0 3.8 1.9 135 chr3R 13647610 intron rin + chr3R 13647678 intron rin + chr3R 13647745 intron rin + chr3R_9_13645001 chr3R_13645001 RAL-370 2064 chr3R 13672937 13672973 chr3R 13673018 13673071 12 96 6.0 2.5 4.2 2.3 134 chr3R 13672937 intron Task6 - chr3R 13673004 intron Task6 - chr3R 13673071 intron Task6 - chr3R_12_13670001 chr3R_13670001 RAL-370 2065 chr3R 13692766 13692813 chr3R 13692864 13692911 12 98 6.5 6.5 6.5 1.6 145 chr3R 13692766 3` UTR flfl + chr3R 13692838 3` UTR flfl + chr3R 13692911 3` UTR flfl + chr3R_12_13690001 chr3R_13690001 RAL-370 2066 chr3R 13782037 13782082 chr3R 13782137 13782183 9 100 5.0 3.5 4.2 1.7 146 chr3R 13782037 exon CG9286 + chr3R 13782110 intergenic CG9286 +,Dip-B + chr3R 13782183 intergenic CG9286 +,Dip-B + chr3R_9_13780001 chr3R_13780001 RAL-370 2067 chr3R 13850293 13850342 chr3R 13850407 13850442 8 109 0.0 4.5 2.2 2.5 149 chr3R 13850293 intergenic not near genes chr3R 13850368 intergenic not near genes chr3R 13850442 intergenic not near genes chr3R_8_13850001 chr3R_13850001 RAL-370 2068 chr3R 13863670 13863712 chr3R 13863769 13863817 9 104 5.5 3.0 4.2 1.7 147 chr3R 13863670 intergenic not near genes chr3R 13863744 intergenic not near genes chr3R 13863817 intergenic not near genes chr3R_9_13860001 chr3R_13860001 RAL-370 2069 chr3R 13909899 13909906 chr3R 13909999 13910004 4 100 4.0 5.0 4.5 0.7 105 chr3R 13909899 intergenic not near genes chr3R 13909952 intergenic not near genes chr3R 13910004 intergenic not near genes chr3R_4_13905001 chr3R_13905001 RAL-370 2070 chr3R 13948208 13948247 chr3R 13948306 13948345 4 98 2.5 1.5 2.0 1.3 137 chr3R 13948208 intergenic CG31517 + chr3R 13948276 intergenic CG31517 + chr3R 13948345 intergenic CG31517 + chr3R_4_13945001 chr3R_13945001 RAL-370 2071 chr3R 14021628 14021658 chr3R 14023473 14023502 S-element 14 1843 4.5 5.0 4.8 2.4 1874 chr3R 14021628 intron rdx - chr3R 14022565 intron rdx - chr3R 14023502 intron rdx - chr3R_14_14020001 chr3R_14020001 RAL-370 2072 chr3R 14058109 14058146 chr3R 14058244 14058285 10 139 4.0 1.5 2.8 2.6 176 chr3R 14058109 intron foxo + chr3R 14058197 intron foxo + chr3R 14058285 intron foxo + chr3R_10_14055001 chr3R_14055001 RAL-370 2073 chr3R 14067122 14067154 chr3R 14067221 14067252 11 99 3.0 0.5 1.8 3.9 130 chr3R 14067122 exon foxo + chr3R 14067187 intron foxo + chr3R 14067252 intron foxo + chr3R_11_14065001 chr3R_14065001 RAL-370 2074 chr3R 14077942 14077986 chr3R 14078042 14078065 7 97 2.5 1.5 2.0 2.3 123 chr3R 14077942 intron foxo + chr3R 14078004 intron foxo + chr3R 14078065 intron foxo + chr3R_7_14075001 chr3R_14075001 RAL-370 2075 chr3R 14083395 14083421 chr3R 14083516 14083542 10 120 7.5 0.0 3.8 2.1 147 chr3R 14083395 intron foxo + chr3R 14083468 intron foxo + chr3R 14083542 intron foxo + chr3R_10_14080001 chr3R_14080001 RAL-370 2076 chr3R 14174939 14174989 chr3R 14175045 14175096 15 102 2.0 4.0 3.0 3.8 157 chr3R 14174939 3` UTR Dop1R1 - chr3R 14175018 3` UTR Dop1R1 - chr3R 14175096 3` UTR Dop1R1 - chr3R_15_14175001 chr3R_14175001 RAL-370 2077 chr3R 14180792 14180834 chr3R 14185576 14185619 F-element 14 4785 5.5 0.5 3.0 3.5 4827 chr3R 14180792 intron Dop1R1 - chr3R 14183206 intron Dop1R1 - chr3R 14185619 intron Dop1R1 - chr3R_14_14180001 chr3R_14180001 RAL-370 2078 chr3R 14246401 14246416 chr3R 14247882 14247929 jockey 6 1507 2.0 2.0 2.0 2.0 1528 chr3R 14246401 intergenic not near genes chr3R 14247165 intergenic not near genes chr3R 14247929 intergenic not near genes chr3R_6_14245001 chr3R_14245001 RAL-370 2079 chr3R 14329502 14329534 chr3R 14329766 14329798 6 263 5.5 3.5 4.5 1.1 296 chr3R 14329502 3` UTR spn-B + chr3R 14329650 intergenic spn-B +,NK7.1 - chr3R 14329798 intergenic spn-B +,NK7.1 - chr3R_6_14325001 chr3R_14325001 RAL-370 2080 chr3R 14440706 14440755 chr3R 14440802 14440851 13 96 3.5 5.5 4.5 2.4 145 chr3R 14440706 intron cv-c - chr3R 14440778 intron cv-c - chr3R 14440851 intron cv-c - chr3R_13_14440001 chr3R_14440001 RAL-370 2081 chr3R 14527392 14527412 chr3R 14527478 14527491 6 92 7.5 4.0 5.8 0.9 99 chr3R 14527392 intron Pde6 - chr3R 14527442 intron Pde6 - chr3R 14527491 intron Pde6 - chr3R_6_14525001 chr3R_14525001 RAL-370 2082 chr3R 14608453 14608472 chr3R 14608563 14608584 9 112 1.5 6.5 4.0 1.8 131 chr3R 14608453 intergenic stumps + chr3R 14608518 intergenic stumps + chr3R 14608584 intergenic not near genes chr3R_9_14605001 chr3R_14605001 RAL-370 2083 chr3R 14644581 14644582 chr3R 31300897 31300902 4 16656319 9.5 4.5 7.0 0.5 16656321 chr3R 14644581 3` UTR l(3)L1231 - chr3R 22972742 intergenic not near genes chr3R 31300902 intergenic not near genes chr3R_4_22970001 chr3R_22970001 RAL-370 2084 chr3R 14662294 14662337 chr3R 14662395 14662438 15 100 6.0 4.5 5.2 2.4 144 chr3R 14662294 exon Rad17 - chr3R 14662366 intron Rad17 - chr3R 14662438 exon Rad17 - chr3R_15_14660001 chr3R_14660001 RAL-370 2085 chr3R 14664858 14664902 chr3R 14664955 14664999 10 97 1.5 1.0 1.2 4.5 141 chr3R 14664858 intergenic BigH1 +,Meltrin - chr3R 14664928 3` UTR Meltrin - chr3R 14664999 3` UTR Meltrin - chr3R_10_14660001 chr3R_14660001 RAL-370 2086 chr3R 14704368 14704412 chr3R 14704465 14704509 19 96 6.0 5.0 5.5 2.9 141 chr3R 14704368 intron kibra - chr3R 14704438 intron kibra - chr3R 14704509 intron kibra - chr3R_19_14700001 chr3R_14700001 RAL-370 2087 chr3R 14727102 14727131 chr3R 14732091 14732138 16 4993 26.0 38.5 32.2 0.5 5036 chr3R 14727102 intron CG7530 - chr3R 14729620 intron CG7530 - chr3R 14732138 intergenic not near genes chr3R_16_14725001 chr3R_14725001 RAL-370 2088 chr3R 14767509 14767563 chr3R 14767624 14767639 11 108 3.0 1.5 2.2 3.4 130 chr3R 14767509 intron jvl + chr3R 14767574 intron jvl + chr3R 14767639 intron jvl + chr3R_11_14765001 chr3R_14765001 RAL-370 2089 chr3R 14775980 14776002 chr3R 14776091 14776113 5 111 11.0 5.0 8.0 0.6 133 chr3R 14775980 intron jvl + chr3R 14776046 intron jvl + chr3R 14776113 intron jvl + chr3R_5_14775001 chr3R_14775001 RAL-370 2090 chr3R 14776003 14776031 chr3R 14776090 14776141 14 106 5.5 5.0 5.2 2.3 138 chr3R 14776003 intron jvl + chr3R 14776072 intron jvl + chr3R 14776141 intron jvl + chr3R_14_14775001 chr3R_14775001 RAL-370 2091 chr3R 14779058 14779097 chr3R 14779158 14779192 9 99 2.0 9.0 5.5 1.4 134 chr3R 14779058 intron jvl + chr3R 14779125 intron jvl + chr3R 14779192 intron jvl + chr3R_9_14775001 chr3R_14775001 RAL-370 2092 chr3R 14943145 14943185 chr3R 14944229 14944269 14 1082 3.5 4.0 3.8 2.9 1124 chr3R 14943145 intergenic not near genes chr3R 14943707 intergenic not near genes chr3R 14944269 intergenic not near genes chr3R_14_14940001 chr3R_14940001 RAL-370 2093 chr3R 15026315 15026340 chr3R 15026421 15026446 6 106 3.5 4.5 4.0 1.2 131 chr3R 15026315 intergenic not near genes chr3R 15026380 intergenic not near genes chr3R 15026446 intergenic not near genes chr3R_6_15025001 chr3R_15025001 RAL-370 2094 chr3R 15059473 15059478 chr3R 15059580 15059585 4 107 0.0 7.5 3.8 0.8 112 chr3R 15059473 intron dpr9 - chr3R 15059529 intron dpr9 - chr3R 15059585 intron dpr9 - chr3R_4_15055001 chr3R_15055001 RAL-370 2095 chr3R 15079787 15079830 chr3R 15080048 15080090 pogo 12 261 4.0 6.0 5.0 2.0 303 chr3R 15079787 3` UTR CG6966 - chr3R 15079938 3` UTR CG6966 - chr3R 15080090 3` UTR CG6966 - chr3R_12_15075001 chr3R_15075001 RAL-370 2096 chr3R 15088079 15088083 chr3R 15088197 15088201 5 118 7.5 4.5 6.0 0.7 122 chr3R 15088079 intron CG6966 - chr3R 15088140 intron CG6966 - chr3R 15088201 intron CG6966 - chr3R_5_15085001 chr3R_15085001 RAL-370 2097 chr3R 15114897 15114934 chr3R 15114994 15115031 8 96 3.0 3.0 3.0 2.0 134 chr3R 15114897 intron CG42788 - chr3R 15114964 intron CG42788 - chr3R 15115031 intron CG42788 - chr3R_8_15110001 chr3R_15110001 RAL-370 2098 chr3R 15132053 15132073 chr3R 15135133 15135141 Juan 6 3078 10.0 11.0 10.5 0.5 3088 chr3R 15132053 intergenic CG42788 - chr3R 15133597 intergenic not near genes chr3R 15135141 3` UTR CG6912 - chr3R_6_15130001 chr3R_15130001 RAL-370 2099 chr3R 15156195 15156244 chr3R 15156362 15156411 10 167 3.5 1.0 2.2 3.1 216 chr3R 15156195 intron Gyc88E + chr3R 15156303 intron Gyc88E + chr3R 15156411 intron Gyc88E + chr3R_10_15155001 chr3R_15155001 RAL-370 2100 chr3R 15160545 15160594 chr3R 15160663 15160711 7 117 2.5 4.0 3.2 1.7 166 chr3R 15160545 intron Gyc88E + chr3R 15160628 intron Gyc88E + chr3R 15160711 intron Gyc88E + chr3R_7_15160001 chr3R_15160001 RAL-370 2101 chr3R 15162529 15162578 chr3R 15167316 15167364 F-element 13 4784 4.0 3.5 3.8 2.7 4835 chr3R 15162529 intron Gyc88E + chr3R 15164946 intron Gyc88E + chr3R 15167364 intron Gyc88E + chr3R_13_15160001 chr3R_15160001 RAL-370 2102 chr3R 15180886 15180913 chr3R 15180992 15181004 5 103 1.5 0.0 0.8 2.8 118 chr3R 15180886 intron Gyc88E + chr3R 15180945 intron Gyc88E + chr3R 15181004 intron Gyc88E + chr3R_5_15180001 chr3R_15180001 RAL-370 2103 chr3R 15184516 15184564 chr3R 15184618 15184650 18 97 3.0 5.5 4.2 3.5 134 chr3R 15184516 intron Gyc88E + chr3R 15184583 intron Gyc88E + chr3R 15184650 intron Gyc88E + chr3R_18_15180001 chr3R_15180001 RAL-370 2104 chr3R 15300591 15300605 chr3R 15300696 15300713 6 107 0.5 9.5 5.0 1.0 122 chr3R 15300591 intron Tm1 + chr3R 15300652 intron Tm1 + chr3R 15300713 intron Tm1 + chr3R_6_15300001 chr3R_15300001 RAL-370 2105 chr3R 15406128 15406169 chr3R 15406229 15406265 10 100 3.5 3.5 3.5 2.2 137 chr3R 15406128 intron CG6125 - chr3R 15406196 intron CG6125 - chr3R 15406265 intron CG6125 - chr3R_10_15405001 chr3R_15405001 RAL-370 2106 chr3R 15452256 15452303 chr3R 15452353 15452400 15 96 3.0 6.0 4.5 2.7 144 chr3R 15452256 intron AdamTS-A - chr3R 15452328 intron AdamTS-A - chr3R 15452400 intron AdamTS-A - chr3R_15_15450001 chr3R_15450001 RAL-370 2107 chr3R 15566402 15566448 chr3R 15566504 15566552 9 103 1.5 3.5 2.5 2.6 150 chr3R 15566402 intergenic not near genes chr3R 15566477 intergenic not near genes chr3R 15566552 intergenic not near genes chr3R_9_15565001 chr3R_15565001 RAL-370 2108 chr3R 15594661 15594675 chr3R 15594754 15594776 6 101 0.0 6.0 3.0 1.5 115 chr3R 15594661 intergenic not near genes chr3R 15594718 intergenic not near genes chr3R 15594776 intergenic not near genes chr3R_6_15590001 chr3R_15590001 RAL-370 2109 chr3R 15601159 15601194 chr3R 15608693 15608736 412 16 7540 5.0 6.5 5.8 2.4 7577 chr3R 15601159 intergenic not near genes chr3R 15604948 intergenic not near genes chr3R 15608736 intergenic not near genes chr3R_16_15600001 chr3R_15600001 RAL-370 2110 chr3R 15608777 15608786 chr3R 15609021 15609035 5 248 10.5 3.0 6.8 0.6 258 chr3R 15608777 intergenic not near genes chr3R 15608906 intergenic not near genes chr3R 15609035 intergenic not near genes chr3R_5_15605001 chr3R_15605001 RAL-370 2111 chr3R 15608791 15608819 chr3R 15609016 15609068 13 242 3.5 2.5 3.0 3.2 277 chr3R 15608791 intergenic not near genes chr3R 15608930 intergenic not near genes chr3R 15609068 intergenic not near genes chr3R_13_15605001 chr3R_15605001 RAL-370 2112 chr3R 15618753 15618764 chr3R 15626241 15626258 blood 7 7492 0.5 7.5 4.0 1.4 7505 chr3R 15618753 intergenic not near genes chr3R 15622506 intergenic not near genes chr3R 15626258 intergenic not near genes chr3R_7_15620001 chr3R_15620001 RAL-370 2113 chr3R 15667992 15668038 chr3R 15668099 15668121 11 106 7.0 2.5 4.8 1.9 129 chr3R 15667992 intron,5` UTR pxb +,CR43849 + chr3R 15668056 intron,5` UTR pxb +,CR43849 + chr3R 15668121 intron,5` UTR pxb +,CR43849 + chr3R_11_15665001 chr3R_15665001 RAL-370 2114 chr3R 15676532 15676577 chr3R 15676631 15676676 8 94 3.5 2.5 3.0 2.0 144 chr3R 15676532 intron pxb + chr3R 15676604 intron pxb + chr3R 15676676 intron pxb + chr3R_8_15675001 chr3R_15675001 RAL-370 2115 chr3R 15702869 15702890 chr3R 15703078 15703096 9 209 0.0 9.5 4.8 1.6 227 chr3R 15702869 intergenic not near genes chr3R 15702982 intergenic not near genes chr3R 15703096 intergenic not near genes chr3R_9_15700001 chr3R_15700001 RAL-370 2116 chr3R 15715783 15715826 chr3R 15715888 15715931 15 104 5.0 3.5 4.2 2.9 148 chr3R 15715783 exon CG31294 - chr3R 15715857 intron CG31294 - chr3R 15715931 exon CG31294 - chr3R_15_15715001 chr3R_15715001 RAL-370 2117 chr3R 15734155 15734193 chr3R 15734260 15734302 6 109 9.5 7.0 8.2 0.7 147 chr3R 15734155 intergenic not near genes chr3R 15734228 intergenic not near genes chr3R 15734302 intergenic not near genes chr3R_6_15730001 chr3R_15730001 RAL-370 2118 chr3R 15735222 15735236 chr3R 15739962 15739976 F-element 4 4740 2.0 3.5 2.8 1.1 4754 chr3R 15735222 intergenic not near genes chr3R 15737599 intergenic not near genes chr3R 15739976 intergenic not near genes chr3R_4_15735001 chr3R_15735001 RAL-370 2119 chr3R 15743850 15743901 chr3R 15743982 15744031 25 130 4.5 5.0 4.8 4.3 181 chr3R 15743850 intergenic not near genes chr3R 15743940 intergenic not near genes chr3R 15744031 intergenic not near genes chr3R_25_15740001 chr3R_15740001 RAL-370 2120 chr3R 15811491 15811535 chr3R 15811741 15811750 19 251 5.0 4.5 4.8 3.3 259 chr3R 15811491 intron alpha-Man-IIb + chr3R 15811620 intron alpha-Man-IIb + chr3R 15811750 intron,3` UTR alpha-Man-IIb +,CR45211 - chr3R_19_15810001 chr3R_15810001 RAL-370 2121 chr3R 15891651 15891676 chr3R 15892061 15892088 6 412 6.5 6.0 6.2 0.8 437 chr3R 15891651 intron CG14877 - chr3R 15891870 intron CG14877 - chr3R 15892088 intron CG14877 - chr3R_6_15890001 chr3R_15890001 RAL-370 2122 chr3R 15892637 15892645 chr3R 15892737 15892746 4 100 6.5 4.5 5.5 0.6 109 chr3R 15892637 intron CG14877 - chr3R 15892692 intron CG14877 - chr3R 15892746 intron CG14877 - chr3R_4_15890001 chr3R_15890001 RAL-370 2123 chr3R 15892648 15892681 chr3R 15892733 15892782 14 97 3.0 4.5 3.8 2.9 134 chr3R 15892648 intron CG14877 - chr3R 15892715 intron CG14877 - chr3R 15892782 intron CG14877 - chr3R_14_15890001 chr3R_15890001 RAL-370 2124 chr3R 16195547 16195582 chr3R 16195788 16195823 10 239 1.0 4.5 2.8 2.6 276 chr3R 16195547 intron sra + chr3R 16195685 intron sra + chr3R 16195823 intron sra + chr3R_10_16195001 chr3R_16195001 RAL-370 2125 chr3R 16225073 16225113 chr3R 16225178 16225218 9 105 4.0 3.5 3.8 1.9 145 chr3R 16225073 intergenic not near genes chr3R 16225146 intergenic not near genes chr3R 16225218 intergenic tara + chr3R_9_16225001 chr3R_16225001 RAL-370 2126 chr3R 16298875 16298906 chr3R 16298980 16299011 5 105 3.5 6.0 4.8 0.9 136 chr3R 16298875 intron gish + chr3R 16298943 intron gish + chr3R 16299011 intron gish + chr3R_5_16295001 chr3R_16295001 RAL-370 2127 chr3R 16462661 16462699 chr3R 16462756 16462799 21 97 2.5 6.5 4.5 3.8 138 chr3R 16462661 exon CG42232 - chr3R 16462730 exon CG42232 - chr3R 16462799 exon CG42232 - chr3R_21_16460001 chr3R_16460001 RAL-370 2128 chr3R 16472565 16472596 chr3R 16472660 16472664 12 88 4.5 4.5 4.5 2.2 99 chr3R 16472565 intergenic Gyc-89Da + chr3R 16472614 5` UTR Gyc-89Da + chr3R 16472664 5` UTR Gyc-89Da + chr3R_12_16470001 chr3R_16470001 RAL-370 2129 chr3R 16633675 16633681 chr3R 16633795 16633798 4 119 14.0 10.5 12.2 0.3 123 chr3R 16633675 intron Fas1 + chr3R 16633736 intron Fas1 + chr3R 16633798 intron Fas1 + chr3R_4_16630001 chr3R_16630001 RAL-370 2130 chr3R 16704566 16704614 chr3R 16704661 16704713 16 98 4.0 3.0 3.5 3.6 147 chr3R 16704566 intron Ubx - chr3R 16704640 intron Ubx - chr3R 16704713 intron Ubx - chr3R_16_16700001 chr3R_16700001 RAL-370 2131 chr3R 16756305 16756327 chr3R 16762514 16762538 diver 4 6210 7.5 3.0 5.2 0.6 6233 chr3R 16756305 intron bxd - chr3R 16759422 intron bxd - chr3R 16762538 intron bxd - chr3R_4_16755001 chr3R_16755001 RAL-370 2132 chr3R 16756330 16756352 chr3R 16762508 16762550 diver 6 6194 5.0 2.5 3.8 1.2 6220 chr3R 16756330 intron bxd - chr3R 16759440 intron bxd - chr3R 16762550 intron bxd - chr3R_6_16755001 chr3R_16755001 RAL-370 2133 chr3R 16782014 16782033 chr3R 16782115 16782134 5 101 4.5 7.0 5.8 0.7 120 chr3R 16782014 intergenic not near genes chr3R 16782074 intergenic not near genes chr3R 16782134 intergenic not near genes chr3R_5_16780001 chr3R_16780001 RAL-370 2134 chr3R 16782043 16782045 chr3R 16782097 16782115 5 77 3.0 5.0 4.0 1.0 72 chr3R 16782043 intergenic not near genes chr3R 16782079 intergenic not near genes chr3R 16782115 intergenic not near genes chr3R_5_16780001 chr3R_16780001 RAL-370 2135 chr3R 16795269 16795320 chr3R 16795379 16795428 15 109 5.5 3.5 4.5 2.7 159 chr3R 16795269 intergenic not near genes chr3R 16795348 intergenic not near genes chr3R 16795428 intergenic not near genes chr3R_15_16795001 chr3R_16795001 RAL-370 2136 chr3R 16816308 16816334 chr3R 16816496 16816524 6 190 2.0 4.0 3.0 1.5 216 chr3R 16816308 intron abd-A - chr3R 16816416 intron abd-A - chr3R 16816524 intron abd-A - chr3R_6_16815001 chr3R_16815001 RAL-370 2137 chr3R 16820233 16820276 chr3R 16820347 16820390 12 114 1.0 2.0 1.5 4.8 157 chr3R 16820233 intron abd-A - chr3R 16820312 intron abd-A - chr3R 16820390 intron abd-A - chr3R_12_16820001 chr3R_16820001 RAL-370 2138 chr3R 17120485 17120508 chr3R 17120728 17120753 13 244 7.5 3.0 5.2 2.1 268 chr3R 17120485 intron,exon cher -,CG34278 + chr3R 17120619 intron,exon cher -,CG34278 + chr3R 17120753 intron,exon cher -,CG34278 + chr3R_13_17120001 chr3R_17120001 RAL-370 2139 chr3R 17120515 17120522 chr3R 17120727 17120764 4 236 6.0 3.0 4.5 0.7 249 chr3R 17120515 intron,exon cher -,CG34278 + chr3R 17120640 intron,exon cher -,CG34278 + chr3R 17120764 intron,3` UTR cher -,CG34278 + chr3R_4_17120001 chr3R_17120001 RAL-370 2140 chr3R 17121506 17121550 chr3R 17121721 17121765 12 215 2.5 3.0 2.8 3.2 259 chr3R 17121506 intron cher - chr3R 17121636 intron,exon cher -,CG42779 + chr3R 17121765 intron,exon cher -,CG42779 + chr3R_12_17120001 chr3R_17120001 RAL-370 2141 chr3R 17155665 17155701 chr3R 17155760 17155762 8 86 6.0 6.0 6.0 1.1 97 chr3R 17155665 exon Mur89F - chr3R 17155714 exon Mur89F - chr3R 17155762 exon Mur89F - chr3R_8_17155001 chr3R_17155001 RAL-370 2142 chr3R 17166198 17166213 chr3R 17166317 17166332 5 119 3.0 3.0 3.0 1.2 134 chr3R 17166198 intron Mur89F - chr3R 17166265 intron Mur89F - chr3R 17166332 intron Mur89F - chr3R_5_17165001 chr3R_17165001 RAL-370 2143 chr3R 17194395 17194425 chr3R 17194494 17194524 8 96 2.5 3.5 3.0 2.0 129 chr3R 17194395 intron Mur89F - chr3R 17194460 intron Mur89F - chr3R 17194524 intron Mur89F - chr3R_8_17190001 chr3R_17190001 RAL-370 2144 chr3R 17209685 17209707 chr3R 17209793 17209815 6 107 8.5 5.5 7.0 0.8 130 chr3R 17209685 intergenic not near genes chr3R 17209750 intergenic not near genes chr3R 17209815 intergenic not near genes chr3R_6_17205001 chr3R_17205001 RAL-370 2145 chr3R 17294645 17294667 chr3R 17295093 17295115 BS 6 448 4.5 0.0 2.2 1.9 470 chr3R 17294645 intergenic not near genes chr3R 17294880 intergenic not near genes chr3R 17295115 intergenic not near genes chr3R_6_17290001 chr3R_17290001 RAL-370 2146 chr3R 17346673 17346702 chr3R 17348256 17348285 F-element 12 1583 5.5 12.5 9.0 1.2 1612 chr3R 17346673 intron beat-IIa - chr3R 17347479 intron beat-IIa - chr3R 17348285 intron beat-IIa - chr3R_12_17345001 chr3R_17345001 RAL-370 2147 chr3R 17346703 17346711 chr3R 17348244 17348288 F-element 5 1573 5.0 6.5 5.8 0.7 1585 chr3R 17346703 intron beat-IIa - chr3R 17347496 intron beat-IIa - chr3R 17348288 intron beat-IIa - chr3R_5_17345001 chr3R_17345001 RAL-370 2148 chr3R 17355480 17355522 chr3R 17355570 17355620 9 96 7.0 7.5 7.2 1.1 140 chr3R 17355480 intron beat-IIa - chr3R 17355550 intron beat-IIa - chr3R 17355620 intron beat-IIa - chr3R_9_17355001 chr3R_17355001 RAL-370 2149 chr3R 17406295 17406305 chr3R 17409253 17409284 4 2973 3.0 5.0 4.0 0.8 2989 chr3R 17406295 exon CG42824 - chr3R 17407790 intergenic CG17283 +,CG42798 + chr3R 17409284 3` UTR CG17283 + chr3R_4_17405001 chr3R_17405001 RAL-370 2150 chr3R 17452647 17452668 chr3R 17452743 17452763 4 96 0.0 0.5 0.2 3.3 116 chr3R 17452647 intergenic not near genes chr3R 17452705 intergenic not near genes chr3R 17452763 intergenic not near genes chr3R_4_17450001 chr3R_17450001 RAL-370 2151 chr3R 17461179 17461224 chr3R 17461281 17461326 15 100 3.0 5.5 4.2 2.9 147 chr3R 17461179 intergenic not near genes chr3R 17461252 intergenic not near genes chr3R 17461326 intergenic not near genes chr3R_15_17460001 chr3R_17460001 RAL-370 2152 chr3R 17497946 17497983 chr3R 17498052 17498089 8 105 2.5 1.0 1.8 2.9 143 chr3R 17497946 intron Dscam3 - chr3R 17498018 intron Dscam3 - chr3R 17498089 intron Dscam3 - chr3R_8_17495001 chr3R_17495001 RAL-370 2153 chr3R 17500614 17500647 chr3R 17501196 17501205 5 576 3.5 9.5 6.5 0.7 591 chr3R 17500614 intron Dscam3 - chr3R 17500910 intron Dscam3 - chr3R 17501205 intron Dscam3 - chr3R_5_17500001 chr3R_17500001 RAL-370 2154 chr3R 17546066 17546082 chr3R 17546170 17546186 6 104 6.0 0.5 3.2 1.4 120 chr3R 17546066 intron Prx3 - chr3R 17546126 intron Prx3 - chr3R 17546186 exon Prx3 - chr3R_6_17545001 chr3R_17545001 RAL-370 2155 chr3R 17584837 17584879 chr3R 17585029 17585069 20 190 6.0 2.5 4.2 3.8 232 chr3R 17584837 intergenic not near genes chr3R 17584953 intergenic not near genes chr3R 17585069 intergenic not near genes chr3R_20_17580001 chr3R_17580001 RAL-370 2156 chr3R 17591270 17591293 chr3R 17591721 17591742 F-element 7 454 7.0 0.5 3.8 1.5 472 chr3R 17591270 intergenic not near genes chr3R 17591506 intergenic not near genes chr3R 17591742 intergenic not near genes chr3R_7_17590001 chr3R_17590001 RAL-370 2157 chr3R 17638300 17638344 chr3R 17638806 17638850 roo 8 506 5.0 3.5 4.2 1.5 550 chr3R 17638300 intron CG43175 + chr3R 17638575 intron CG43175 + chr3R 17638850 intron,intron CG43175 +,CR45222 + chr3R_8_17635001 chr3R_17635001 RAL-370 2158 chr3R 17645686 17645724 chr3R 17645836 17645874 11 150 3.0 3.5 3.2 2.6 188 chr3R 17645686 intergenic CG43175 + chr3R 17645780 intergenic not near genes chr3R 17645874 intergenic not near genes chr3R_11_17645001 chr3R_17645001 RAL-370 2159 chr3R 17657651 17657661 chr3R 17657822 17657832 INE-1 6 171 0.0 11.0 5.5 0.9 181 chr3R 17657651 intron CG14322 + chr3R 17657742 intron CG14322 + chr3R 17657832 intron CG14322 + chr3R_6_17655001 chr3R_17655001 RAL-370 2160 chr3R 17766563 17766584 chr3R 17766687 17766708 9 123 0.0 2.0 1.0 4.5 145 chr3R 17766563 intergenic not near genes chr3R 17766636 intergenic not near genes chr3R 17766708 intergenic not near genes chr3R_9_17765001 chr3R_17765001 RAL-370 2161 chr3R 17773357 17773389 chr3R 17773470 17773504 10 115 2.5 3.0 2.8 2.6 147 chr3R 17773357 exon CG43102 - chr3R 17773430 intron CG43102 - chr3R 17773504 exon CG43102 - chr3R_10_17770001 chr3R_17770001 RAL-370 2162 chr3R 17823189 17823227 chr3R 17823294 17823301 9 102 3.0 4.5 3.8 1.9 112 chr3R 17823189 intron tinc + chr3R 17823245 intron tinc + chr3R 17823301 intron tinc + chr3R_9_17820001 chr3R_17820001 RAL-370 2163 chr3R 17848694 17848724 chr3R 17849112 17849142 10 418 2.5 4.0 3.2 2.4 448 chr3R 17848694 intron tinc + chr3R 17848918 intron tinc + chr3R 17849142 intron tinc + chr3R_10_17845001 chr3R_17845001 RAL-370 2164 chr3R 17856024 17856034 chr3R 17856143 17856144 6 117 4.5 6.0 5.2 1.0 120 chr3R 17856024 intron tinc + chr3R 17856084 intron tinc + chr3R 17856144 intron tinc + chr3R_6_17855001 chr3R_17855001 RAL-370 2165 chr3R 17884733 17884777 chr3R 17884839 17884884 9 106 4.0 6.0 5.0 1.5 151 chr3R 17884733 intron Rim - chr3R 17884808 intron Rim - chr3R 17884884 intron Rim - chr3R_9_17880001 chr3R_17880001 RAL-370 2166 chr3R 17925840 17925885 chr3R 17927327 17927329 hobo 8 1473 4.5 5.0 4.8 1.4 1489 chr3R 17925840 intron cpo + chr3R 17926584 intron cpo + chr3R 17927329 intron cpo + chr3R_8_17925001 chr3R_17925001 RAL-370 2167 chr3R 17976502 17976526 chr3R 17976599 17976622 10 96 4.0 4.0 4.0 2.0 120 chr3R 17976502 intron cpo + chr3R 17976562 intron cpo + chr3R 17976622 intron cpo + chr3R_10_17975001 chr3R_17975001 RAL-370 2168 chr3R 17995832 17995864 chr3R 17995943 17995975 13 111 1.0 2.0 1.5 5.2 143 chr3R 17995832 intron cpo + chr3R 17995904 intron cpo + chr3R 17995975 intron cpo + chr3R_13_17995001 chr3R_17995001 RAL-370 2169 chr3R 17997132 17997136 chr3R 17997230 17997244 4 102 0.0 13.5 6.8 0.5 112 chr3R 17997132 intron cpo + chr3R 17997188 intron cpo + chr3R 17997244 intron cpo + chr3R_4_17995001 chr3R_17995001 RAL-370 2170 chr3R 18003021 18003036 chr3R 18003136 18003152 8 116 9.0 0.5 4.8 1.4 131 chr3R 18003021 intron cpo + chr3R 18003086 intron cpo + chr3R 18003152 intron cpo + chr3R_8_18000001 chr3R_18000001 RAL-370 2171 chr3R 18025312 18025358 chr3R 18025413 18025459 14 99 4.5 5.0 4.8 2.4 147 chr3R 18025312 3` UTR CG7794 + chr3R 18025386 intergenic CG7794 + chr3R 18025459 intergenic CG7794 + chr3R_14_18025001 chr3R_18025001 RAL-370 2172 chr3R 18041738 18041763 chr3R 18041830 18041860 6 96 2.0 0.5 1.2 2.7 122 chr3R 18041738 intergenic not near genes chr3R 18041799 intergenic not near genes chr3R 18041860 intergenic not near genes chr3R_6_18040001 chr3R_18040001 RAL-370 2173 chr3R 18061431 18061445 chr3R 18061543 18061557 5 112 6.0 1.0 3.5 1.1 126 chr3R 18061431 intergenic not near genes chr3R 18061494 intergenic not near genes chr3R 18061557 intergenic not near genes chr3R_5_18060001 chr3R_18060001 RAL-370 2174 chr3R 18067957 18068024 chr3R 18068073 18068125 4 105 0.0 2.5 1.2 1.8 168 chr3R 18067957 intergenic not near genes chr3R 18068041 intergenic not near genes chr3R 18068125 intergenic not near genes chr3R_4_18065001 chr3R_18065001 RAL-370 2175 chr3R 18140428 18140473 chr3R 18140526 18140570 9 97 2.5 3.0 2.8 2.4 142 chr3R 18140428 intergenic not near genes chr3R 18140499 intergenic not near genes chr3R 18140570 intergenic not near genes chr3R_9_18140001 chr3R_18140001 RAL-370 2176 chr3R 18143558 18143584 chr3R 18143667 18143693 5 109 2.0 6.0 4.0 1.0 135 chr3R 18143558 intergenic not near genes chr3R 18143626 intergenic not near genes chr3R 18143693 intergenic not near genes chr3R_5_18140001 chr3R_18140001 RAL-370 2177 chr3R 18157610 18157619 chr3R 18157738 18157747 4 128 0.0 7.0 3.5 0.9 137 chr3R 18157610 intergenic CR45103 + chr3R 18157678 intergenic CR45103 + chr3R 18157747 5` UTR CR45103 + chr3R_4_18155001 chr3R_18155001 RAL-370 2178 chr3R 18338979 18339027 chr3R 18339100 18339151 14 124 0.0 2.5 1.2 6.4 172 chr3R 18338979 intron CG15803 - chr3R 18339065 intron CG15803 - chr3R 18339151 intron CG15803 - chr3R_14_18335001 chr3R_18335001 RAL-370 2179 chr3R 18481197 18481204 chr3R 18481299 18481308 5 103 0.0 9.0 4.5 0.9 111 chr3R 18481197 intron fru - chr3R 18481252 intron fru - chr3R 18481308 intron fru - chr3R_5_18480001 chr3R_18480001 RAL-370 2180 chr3R 18498178 18498189 chr3R 18498264 18498284 4 93 5.5 2.5 4.0 0.8 106 chr3R 18498178 intron fru - chr3R 18498231 intron fru - chr3R 18498284 intron fru - chr3R_4_18495001 chr3R_18495001 RAL-370 2181 chr3R 18501589 18501602 chr3R 18501690 18501703 4 101 5.5 6.0 5.8 0.6 114 chr3R 18501589 intron fru - chr3R 18501646 intron fru - chr3R 18501703 intron fru - chr3R_4_18500001 chr3R_18500001 RAL-370 2182 chr3R 18501607 18501623 chr3R 18501673 18501724 8 96 5.0 4.0 4.5 1.5 117 chr3R 18501607 intron fru - chr3R 18501666 intron fru - chr3R 18501724 intron fru - chr3R_8_18500001 chr3R_18500001 RAL-370 2183 chr3R 18606505 18606532 chr3R 18610740 18610784 F-element 11 4250 4.5 5.5 5.0 1.8 4279 chr3R 18606505 intron,intron qin +,CG14304 - chr3R 18608644 intron,intron qin +,CG14304 - chr3R 18610784 intron,intron qin +,CG14304 - chr3R_11_18605001 chr3R_18605001 RAL-370 2184 chr3R 18618245 18618291 chr3R 18618350 18618396 6 105 1.5 3.0 2.2 1.9 151 chr3R 18618245 intron,intron qin +,CG14304 - chr3R 18618320 intron,intron qin +,CG14304 - chr3R 18618396 intron,intron qin +,CG14304 - chr3R_6_18615001 chr3R_18615001 RAL-370 2185 chr3R 18628864 18628870 chr3R 18629006 18629014 4 144 0.0 0.0 0.0 4.0 150 chr3R 18628864 intron qin + chr3R 18628939 intron qin + chr3R 18629014 intron qin + chr3R_4_18625001 chr3R_18625001 RAL-370 2186 chr3R 18644167 18644207 chr3R 18644269 18644301 12 99 2.5 6.5 4.5 2.2 134 chr3R 18644167 intron qin + chr3R 18644234 intron qin + chr3R 18644301 intron qin + chr3R_12_18640001 chr3R_18640001 RAL-370 2187 chr3R 18670375 18670412 chr3R 18670481 18670525 14 111 5.0 3.0 4.0 2.8 150 chr3R 18670375 intron CG7702 + chr3R 18670450 intron CG7702 + chr3R 18670525 intron CG7702 + chr3R_14_18670001 chr3R_18670001 RAL-370 2188 chr3R 18721038 18721069 chr3R 18721195 18721226 7 157 2.5 1.5 2.0 2.3 188 chr3R 18721038 intron Cha + chr3R 18721132 intron Cha + chr3R 18721226 intron Cha + chr3R_7_18720001 chr3R_18720001 RAL-370 2189 chr3R 18730008 18730037 chr3R 18730104 18730116 7 93 2.5 1.5 2.0 2.3 108 chr3R 18730008 exon Cha + chr3R 18730062 intron Cha + chr3R 18730116 exon Cha + chr3R_7_18730001 chr3R_18730001 RAL-370 2190 chr3R 18766760 18766807 chr3R 18766858 18766905 17 97 5.5 5.0 5.2 2.7 145 chr3R 18766760 intron CG7720 - chr3R 18766832 intron CG7720 - chr3R 18766905 intron CG7720 - chr3R_17_18765001 chr3R_18765001 RAL-370 2191 chr3R 18770281 18770295 chr3R 18770380 18770397 5 101 10.0 2.5 6.2 0.7 116 chr3R 18770281 intron CG7720 - chr3R 18770339 intron CG7720 - chr3R 18770397 intron CG7720 - chr3R_5_18770001 chr3R_18770001 RAL-370 2192 chr3R 18770297 18770318 chr3R 18770375 18770420 7 98 3.0 2.5 2.8 1.8 123 chr3R 18770297 intron CG7720 - chr3R 18770358 intron CG7720 - chr3R 18770420 intron CG7720 - chr3R_7_18770001 chr3R_18770001 RAL-370 2193 chr3R 18781682 18781720 chr3R 18781777 18781814 5 89 3.0 3.0 3.0 1.2 132 chr3R 18781682 intron CG7720 - chr3R 18781748 intron CG7720 - chr3R 18781814 intron CG7720 - chr3R_5_18780001 chr3R_18780001 RAL-370 2194 chr3R 18782721 18782770 chr3R 18782835 18782884 9 113 2.5 0.5 1.5 3.6 163 chr3R 18782721 intron CG7720 - chr3R 18782802 intron CG7720 - chr3R 18782884 intron CG7720 - chr3R_9_18780001 chr3R_18780001 RAL-370 2195 chr3R 18785850 18785900 chr3R 18785946 18785994 14 91 2.5 3.0 2.8 3.7 144 chr3R 18785850 intron CG7720 - chr3R 18785922 intron CG7720 - chr3R 18785994 intron CG7720 - chr3R_14_18785001 chr3R_18785001 RAL-370 2196 chr3R 18802107 18802153 chr3R 18802212 18802258 15 104 4.5 7.0 5.8 2.2 151 chr3R 18802107 3` UTR CG18208 - chr3R 18802182 3` UTR CG18208 - chr3R 18802258 3` UTR CG18208 - chr3R_15_18800001 chr3R_18800001 RAL-370 2197 chr3R 18807309 18807332 chr3R 18807405 18807429 6 97 2.5 0.0 1.2 2.7 120 chr3R 18807309 intron CG18208 - chr3R 18807369 intron CG18208 - chr3R 18807429 intron CG18208 - chr3R_6_18805001 chr3R_18805001 RAL-370 2198 chr3R 18808456 18808508 chr3R 18808551 18808587 5 81 0.5 3.0 1.8 1.8 131 chr3R 18808456 intron CG18208 - chr3R 18808522 intron CG18208 - chr3R 18808587 intron CG18208 - chr3R_5_18805001 chr3R_18805001 RAL-370 2199 chr3R 18812066 18812103 chr3R 18812164 18812200 25 96 4.0 8.0 6.0 3.6 134 chr3R 18812066 intron CG18208 - chr3R 18812133 intron CG18208 - chr3R 18812200 intron CG18208 - chr3R_25_18810001 chr3R_18810001 RAL-370 2200 chr3R 18839793 18839838 chr3R 18839897 18839941 10 98 2.0 4.5 3.2 2.4 148 chr3R 18839793 intron CG18208 - chr3R 18839867 intron CG18208 - chr3R 18839941 intron CG18208 - chr3R_10_18835001 chr3R_18835001 RAL-370 2201 chr3R 18856328 18856372 chr3R 18856626 18856637 6 295 3.0 5.0 4.0 1.2 309 chr3R 18856328 intergenic not near genes chr3R 18856482 intergenic not near genes chr3R 18856637 intergenic not near genes chr3R_6_18855001 chr3R_18855001 RAL-370 2202 chr3R 18988513 18988558 chr3R 18988791 18988837 13 278 3.5 5.0 4.2 2.5 324 chr3R 18988513 intron gukh + chr3R 18988675 intron gukh + chr3R 18988837 intron gukh + chr3R_13_18985001 chr3R_18985001 RAL-370 2203 chr3R 18991384 18991397 chr3R 18991468 18991469 7 90 7.5 5.0 6.2 1.0 85 chr3R 18991384 intron gukh + chr3R 18991426 intron gukh + chr3R 18991469 intron gukh + chr3R_7_18990001 chr3R_18990001 RAL-370 2204 chr3R 18991400 18991421 chr3R 18991462 18991512 4 78 4.5 4.0 4.2 0.8 112 chr3R 18991400 intron gukh + chr3R 18991456 intron gukh + chr3R 18991512 intron gukh + chr3R_4_18990001 chr3R_18990001 RAL-370 2205 chr3R 19014079 19014122 chr3R 19014179 19014207 12 90 3.5 5.0 4.2 2.3 128 chr3R 19014079 intron gukh + chr3R 19014143 intron gukh + chr3R 19014207 intron gukh + chr3R_12_19010001 chr3R_19010001 RAL-370 2206 chr3R 19106804 19106844 chr3R 19106914 19106919 6 93 8.5 1.5 5.0 1.0 115 chr3R 19106804 intron CG6040 + chr3R 19106862 intron CG6040 + chr3R 19106919 intron CG6040 + chr3R_6_19105001 chr3R_19105001 RAL-370 2207 chr3R 19136407 19136430 chr3R 19139783 19139796 Bari1 6 3373 39.5 28.0 33.8 0.2 3389 chr3R 19136407 exon Cyp12a4 + chr3R 19138102 intergenic not near genes chr3R 19139796 3` UTR Ppcs - chr3R_6_19135001 chr3R_19135001 RAL-370 2208 chr3R 19146663 19146699 chr3R 19146828 19146867 10 164 1.5 4.5 3.0 2.5 204 chr3R 19146663 intron Ppcs - chr3R 19146765 intron Ppcs - chr3R 19146867 intron Ppcs - chr3R_10_19145001 chr3R_19145001 RAL-370 2209 chr3R 19180898 19180926 chr3R 19180983 19180992 9 96 4.0 7.5 5.8 1.3 94 chr3R 19180898 intron CG31475 + chr3R 19180945 intron CG31475 + chr3R 19180992 intron CG31475 + chr3R_9_19180001 chr3R_19180001 RAL-370 2210 chr3R 19187653 19187703 chr3R 19187750 19187800 8 97 4.0 5.5 4.8 1.4 147 chr3R 19187653 intron CG31475 + chr3R 19187726 intron CG31475 + chr3R 19187800 intron CG31475 + chr3R_8_19185001 chr3R_19185001 RAL-370 2211 chr3R 19276911 19276943 chr3R 19277011 19277043 5 100 4.5 2.0 3.2 1.2 132 chr3R 19276911 intergenic not near genes chr3R 19276977 intergenic not near genes chr3R 19277043 intergenic not near genes chr3R_5_19275001 chr3R_19275001 RAL-370 2212 chr3R 19494393 19494414 chr3R 19494492 19494514 5 100 1.5 3.0 2.2 1.6 121 chr3R 19494393 intron Dys + chr3R 19494454 intron Dys + chr3R 19494514 intron Dys + chr3R_5_19490001 chr3R_19490001 RAL-370 2213 chr3R 19499853 19499873 chr3R 19499981 19500001 6 127 3.0 9.0 6.0 0.9 148 chr3R 19499853 intron Dys + chr3R 19499927 intron Dys + chr3R 19500001 intron Dys + chr3R_6_19495001 chr3R_19495001 RAL-370 2214 chr3R 19505919 19505967 chr3R 19506038 19506086 13 118 7.5 4.5 6.0 1.9 167 chr3R 19505919 exon Dys + chr3R 19506002 intron Dys + chr3R 19506086 intron Dys + chr3R_13_19505001 chr3R_19505001 RAL-370 2215 chr3R 19561804 19561853 chr3R 19561901 19561932 9 94 3.5 0.5 2.0 3.0 128 chr3R 19561804 intron Dys + chr3R 19561868 intron Dys + chr3R 19561932 intron Dys + chr3R_9_19560001 chr3R_19560001 RAL-370 2216 chr3R 19587447 19587498 chr3R 19587553 19587604 13 100 3.0 1.0 2.0 4.3 157 chr3R 19587447 intron Dys + chr3R 19587526 intron Dys + chr3R 19587604 intron Dys + chr3R_13_19585001 chr3R_19585001 RAL-370 2217 chr3R 19593485 19593507 chr3R 19593590 19593612 8 104 6.0 3.5 4.8 1.4 127 chr3R 19593485 intron Dys + chr3R 19593548 intron Dys + chr3R 19593612 intron Dys + chr3R_8_19590001 chr3R_19590001 RAL-370 2218 chr3R 19602549 19602599 chr3R 19602649 19602656 11 95 4.5 2.0 3.2 2.6 107 chr3R 19602549 exon CG7333 + chr3R 19602602 3` UTR CG7333 + chr3R 19602656 intergenic CG7333 + chr3R_11_19600001 chr3R_19600001 RAL-370 2219 chr3R 19699143 19699188 chr3R 19699245 19699270 17 98 6.0 5.5 5.8 2.5 127 chr3R 19699143 intergenic not near genes chr3R 19699206 intergenic not near genes chr3R 19699270 intergenic not near genes chr3R_17_19695001 chr3R_19695001 RAL-370 2220 chr3R 19702303 19702355 chr3R 19702404 19702454 14 98 2.0 6.0 4.0 2.8 151 chr3R 19702303 intergenic not near genes chr3R 19702378 intergenic not near genes chr3R 19702454 intergenic not near genes chr3R_14_19700001 chr3R_19700001 RAL-370 2221 chr3R 19750023 19750071 chr3R 19750123 19750171 13 97 3.0 4.5 3.8 2.7 148 chr3R 19750023 intron GluClalpha + chr3R 19750097 intron GluClalpha + chr3R 19750171 intron GluClalpha + chr3R_13_19750001 chr3R_19750001 RAL-370 2222 chr3R 19827508 19827556 chr3R 19827614 19827662 8 105 2.5 4.5 3.5 1.8 154 chr3R 19827508 intron bnl - chr3R 19827585 intron bnl - chr3R 19827662 exon bnl - chr3R_8_19825001 chr3R_19825001 RAL-370 2223 chr3R 19913990 19914044 chr3R 19914103 19914157 25 110 3.0 3.5 3.2 6.0 167 chr3R 19913990 3` UTR RhoGAP92B + chr3R 19914074 3` UTR RhoGAP92B + chr3R 19914157 3` UTR RhoGAP92B + chr3R_25_19910001 chr3R_19910001 RAL-370 2224 chr3R 19945966 19946002 chr3R 19946081 19946125 16 120 3.5 5.0 4.2 3.1 159 chr3R 19945966 intron Hs6st - chr3R 19946046 intron Hs6st - chr3R 19946125 intron Hs6st - chr3R_16_19945001 chr3R_19945001 RAL-370 2225 chr3R 19953947 19953983 chr3R 19954031 19954068 6 79 4.5 5.0 4.8 1.0 121 chr3R 19953947 intron Hs6st - chr3R 19954008 intron Hs6st - chr3R 19954068 intron Hs6st - chr3R_6_19950001 chr3R_19950001 RAL-370 2226 chr3R 20060614 20060656 chr3R 20060717 20060758 13 101 2.0 2.5 2.2 4.1 144 chr3R 20060614 intergenic not near genes chr3R 20060686 intergenic not near genes chr3R 20060758 intergenic not near genes chr3R_13_20060001 chr3R_20060001 RAL-370 2227 chr3R 20077017 20077069 chr3R 20077123 20077173 16 105 1.0 2.5 1.8 5.7 156 chr3R 20077017 intergenic not near genes chr3R 20077095 intergenic not near genes chr3R 20077173 intergenic not near genes chr3R_16_20075001 chr3R_20075001 RAL-370 2228 chr3R 20109526 20109565 chr3R 20114752 20114762 copia 7 5222 3.5 4.5 4.0 1.4 5236 chr3R 20109526 intergenic not near genes chr3R 20112144 intergenic not near genes chr3R 20114762 intergenic CG10887 + chr3R_7_20110001 chr3R_20110001 RAL-370 2229 chr3R 20156687 20156715 chr3R 20165866 20165903 roo 5 9187 4.0 6.0 5.0 0.8 9216 chr3R 20156687 intergenic not near genes chr3R 20161295 intergenic not near genes chr3R 20165903 intergenic not near genes chr3R_5_20160001 chr3R_20160001 RAL-370 2230 chr3R 20195673 20195720 chr3R 20195770 20195816 13 96 2.0 5.5 3.8 2.7 143 chr3R 20195673 intergenic not near genes chr3R 20195744 intergenic not near genes chr3R 20195816 intergenic not near genes chr3R_13_20195001 chr3R_20195001 RAL-370 2231 chr3R 20205584 20205592 chr3R 20205725 20205734 4 142 0.0 4.0 2.0 1.3 150 chr3R 20205584 intron Nlg4 + chr3R 20205659 intron Nlg4 + chr3R 20205734 intron Nlg4 + chr3R_4_20205001 chr3R_20205001 RAL-370 2232 chr3R 20222248 20222283 chr3R 20222351 20222386 13 103 2.0 5.0 3.5 2.9 138 chr3R 20222248 intron Nlg4 + chr3R 20222317 intron Nlg4 + chr3R 20222386 intron Nlg4 + chr3R_13_20220001 chr3R_20220001 RAL-370 2233 chr3R 20252238 20252248 chr3R 20252336 20252344 4 97 0.5 0.0 0.2 3.3 106 chr3R 20252238 intergenic not near genes chr3R 20252291 intergenic cic + chr3R 20252344 intergenic cic + chr3R_4_20250001 chr3R_20250001 RAL-370 2234 chr3R 20256846 20256871 chr3R 20256944 20256969 9 96 1.5 8.0 4.8 1.6 123 chr3R 20256846 intron cic + chr3R 20256908 intron cic + chr3R 20256969 intron cic + chr3R_9_20255001 chr3R_20255001 RAL-370 2235 chr3R 20266498 20266539 chr3R 20272989 20273030 Burdock 17 6489 8.0 5.0 6.5 2.3 6532 chr3R 20266498 intron cic + chr3R 20269764 intron cic + chr3R 20273030 intron cic + chr3R_17_20265001 chr3R_20265001 RAL-370 2236 chr3R 20282258 20282306 chr3R 20282354 20282359 8 91 0.5 3.0 1.8 2.9 101 chr3R 20282258 intron cic + chr3R 20282308 intron cic + chr3R 20282359 intron cic + chr3R_8_20280001 chr3R_20280001 RAL-370 2237 chr3R 20308167 20308210 chr3R 20308275 20308329 6 115 3.0 0.0 1.5 2.4 162 chr3R 20308167 intergenic not near genes chr3R 20308248 intergenic not near genes chr3R 20308329 intergenic not near genes chr3R_6_20305001 chr3R_20305001 RAL-370 2238 chr3R 20312834 20312886 chr3R 20312940 20312992 13 106 4.5 2.5 3.5 2.9 158 chr3R 20312834 intron CG42668 + chr3R 20312913 intron CG42668 + chr3R 20312992 intron CG42668 + chr3R_13_20310001 chr3R_20310001 RAL-370 2239 chr3R 20330983 20331028 chr3R 20331489 20331534 roo 9 506 2.0 3.5 2.8 2.4 551 chr3R 20330983 intergenic Sirt2 + chr3R 20331258 intergenic Sirt2 + chr3R 20331534 intergenic not near genes chr3R_9_20330001 chr3R_20330001 RAL-370 2240 chr3R 20448080 20448133 chr3R 20448177 20448213 16 94 6.0 5.5 5.8 2.4 133 chr3R 20448080 intron Gfrl - chr3R 20448146 intron Gfrl - chr3R 20448213 intron Gfrl - chr3R_16_20445001 chr3R_20445001 RAL-370 2241 chr3R 20498463 20498510 chr3R 20498565 20498612 10 102 3.0 0.5 1.8 3.6 149 chr3R 20498463 intergenic not near genes chr3R 20498538 intergenic not near genes chr3R 20498612 intergenic not near genes chr3R_10_20495001 chr3R_20495001 RAL-370 2242 chr3R 20506578 20506603 chr3R 20507400 20507425 BS 13 822 10.5 7.5 9.0 1.3 847 chr3R 20506578 intergenic Or92a + chr3R 20507002 intergenic CG4288 - chr3R 20507425 3` UTR CG4288 - chr3R_13_20505001 chr3R_20505001 RAL-370 2243 chr3R 20508323 20508345 chr3R 20508423 20508446 6 101 3.0 0.0 1.5 2.4 123 chr3R 20508323 intron CG4288 - chr3R 20508384 intron CG4288 - chr3R 20508446 intron CG4288 - chr3R_6_20505001 chr3R_20505001 RAL-370 2244 chr3R 20663686 20663729 chr3R 20663810 20663853 18 123 4.5 3.0 3.8 3.8 167 chr3R 20663686 intergenic not near genes chr3R 20663770 intergenic not near genes chr3R 20663853 intergenic not near genes chr3R_18_20660001 chr3R_20660001 RAL-370 2245 chr3R 20684196 20684245 chr3R 20684300 20684349 7 104 1.5 4.0 2.8 1.8 153 chr3R 20684196 intergenic not near genes chr3R 20684272 intergenic not near genes chr3R 20684349 intergenic not near genes chr3R_7_20680001 chr3R_20680001 RAL-370 2246 chr3R 20703462 20703506 chr3R 20703876 20703920 9 414 2.5 2.5 2.5 2.6 458 chr3R 20703462 intron Oamb - chr3R 20703691 intron Oamb - chr3R 20703920 intron Oamb - chr3R_9_20700001 chr3R_20700001 RAL-370 2247 chr3R 20722845 20722862 chr3R 20722983 20723008 5 144 7.5 1.5 4.5 0.9 163 chr3R 20722845 intergenic not near genes chr3R 20722926 intergenic not near genes chr3R 20723008 intergenic not near genes chr3R_5_20720001 chr3R_20720001 RAL-370 2248 chr3R 20722864 20722876 chr3R 20722979 20723011 6 134 4.0 1.0 2.5 1.7 147 chr3R 20722864 intergenic not near genes chr3R 20722938 intergenic not near genes chr3R 20723011 intergenic not near genes chr3R_6_20720001 chr3R_20720001 RAL-370 2249 chr3R 20748086 20748134 chr3R 20748186 20748233 10 98 0.5 3.5 2.0 3.3 147 chr3R 20748086 intron CG42322 + chr3R 20748160 intron CG42322 + chr3R 20748233 intron,3` UTR CG42322 +,Prosalpha4T1 - chr3R_10_20745001 chr3R_20745001 RAL-370 2250 chr3R 20771710 20771731 chr3R 20771811 20771831 7 100 1.0 12.5 6.8 0.9 121 chr3R 20771710 intron,intron Syp +,Takl1 - chr3R 20771770 intron,intron Syp +,Takl1 - chr3R 20771831 intron,exon Syp +,Takl1 - chr3R_7_20770001 chr3R_20770001 RAL-370 2251 chr3R 20787442 20787458 chr3R 20787553 20787568 7 108 6.5 5.5 6.0 1.0 126 chr3R 20787442 intron Syp + chr3R 20787505 intron Syp + chr3R 20787568 intron Syp + chr3R_7_20785001 chr3R_20785001 RAL-370 2252 chr3R 20854461 20854501 chr3R 20859271 20859309 Doc 7 4812 0.5 2.0 1.2 3.2 4848 chr3R 20854461 intron Ir93a - chr3R 20856885 intron Ir93a - chr3R 20859309 exon Ir93a - chr3R_7_20855001 chr3R_20855001 RAL-370 2253 chr3R 20870233 20870280 chr3R 20870337 20870380 23 104 5.0 3.5 4.2 4.4 147 chr3R 20870233 intergenic not near genes chr3R 20870306 intergenic not near genes chr3R 20870380 intergenic not near genes chr3R_23_20870001 chr3R_20870001 RAL-370 2254 chr3R 20901326 20901374 chr3R 20901430 20901481 17 99 1.0 3.5 2.2 5.3 155 chr3R 20901326 intergenic not near genes chr3R 20901404 intergenic not near genes chr3R 20901481 intergenic CG5621 + chr3R_17_20900001 chr3R_20900001 RAL-370 2255 chr3R 20934814 20934840 chr3R 20934913 20934922 9 97 2.5 6.0 4.2 1.7 108 chr3R 20934814 intron CG31191 - chr3R 20934868 intron CG31191 - chr3R 20934922 intron CG31191 - chr3R_9_20930001 chr3R_20930001 RAL-370 2256 chr3R 20942816 20942833 chr3R 20942888 20942929 4 90 3.0 0.0 1.5 1.6 113 chr3R 20942816 intron CG31191 - chr3R 20942872 intron CG31191 - chr3R 20942929 intron CG31191 - chr3R_4_20940001 chr3R_20940001 RAL-370 2257 chr3R 20990704 20990753 chr3R 20990806 20990854 15 99 4.5 5.5 5.0 2.5 150 chr3R 20990704 intron Calx + chr3R 20990779 intron Calx + chr3R 20990854 intron Calx + chr3R_15_20990001 chr3R_20990001 RAL-370 2258 chr3R 21013995 21014016 chr3R 21014093 21014114 6 98 11.0 5.5 8.2 0.7 119 chr3R 21013995 3` UTR Calx + chr3R 21014054 3` UTR Calx + chr3R 21014114 3` UTR Calx + chr3R_6_21010001 chr3R_21010001 RAL-370 2259 chr3R 21014023 21014042 chr3R 21014091 21014140 9 94 3.5 5.5 4.5 1.6 117 chr3R 21014023 3` UTR Calx + chr3R 21014082 3` UTR Calx + chr3R 21014140 3` UTR Calx + chr3R_9_21010001 chr3R_21010001 RAL-370 2260 chr3R 21020385 21020430 chr3R 21020481 21020483 13 92 4.0 4.0 4.0 2.6 98 chr3R 21020385 3` UTR Rlip + chr3R 21020434 3` UTR Rlip + chr3R 21020483 3` UTR Rlip + chr3R_13_21020001 chr3R_21020001 RAL-370 2261 chr3R 21129801 21130013 chr3R 21129909 21130110 4 95 0.0 0.0 0.0 4.0 309 chr3R 21129801 intergenic Obp93a -,CG5793 +,Ice2 + chr3R 21129956 intergenic Obp93a -,Ice2 +,CG5793 + chr3R 21130110 intergenic Ice2 +,Obp93a - chr3R_4_21125001 chr3R_21125001 RAL-370 2262 chr3R 21141658 21141702 chr3R 21150156 21150159 Tirant 8 8493 4.0 3.0 3.5 1.8 8501 chr3R 21141658 intron SNF4Agamma + chr3R 21145908 intron SNF4Agamma + chr3R 21150159 intron SNF4Agamma + chr3R_8_21145001 chr3R_21145001 RAL-370 2263 chr3R 21150794 21150831 chr3R 21150949 21150986 13 155 6.0 8.0 7.0 1.6 192 chr3R 21150794 intron SNF4Agamma + chr3R 21150890 intron SNF4Agamma + chr3R 21150986 intron SNF4Agamma + chr3R_13_21150001 chr3R_21150001 RAL-370 2264 chr3R 21154530 21154587 chr3R 21154755 21154820 10 227 3.5 0.0 1.8 3.6 290 chr3R 21154530 intron SNF4Agamma + chr3R 21154675 intron SNF4Agamma + chr3R 21154820 intron SNF4Agamma + chr3R_10_21150001 chr3R_21150001 RAL-370 2265 chr3R 21189679 21189717 chr3R 21189776 21189814 4 97 2.5 4.0 3.2 1.0 135 chr3R 21189679 intron SNF4Agamma + chr3R 21189746 intron SNF4Agamma + chr3R 21189814 intron SNF4Agamma + chr3R_4_21185001 chr3R_21185001 RAL-370 2266 chr3R 21210115 21210160 chr3R 21210211 21210256 10 92 1.0 2.0 1.5 4.0 141 chr3R 21210115 intron SNF4Agamma + chr3R 21210186 intron SNF4Agamma + chr3R 21210256 intron SNF4Agamma + chr3R_10_21210001 chr3R_21210001 RAL-370 2267 chr3R 21252678 21252720 chr3R 21252794 21252812 6 103 2.5 1.0 1.8 2.1 134 chr3R 21252678 intron ETHR + chr3R 21252745 intron ETHR + chr3R 21252812 intron ETHR + chr3R_6_21250001 chr3R_21250001 RAL-370 2268 chr3R 21390417 21390439 chr3R 21390521 21390543 5 104 4.5 0.0 2.2 1.6 126 chr3R 21390417 3` UTR bap + chr3R 21390480 intergenic bap + chr3R 21390543 intergenic bap + chr3R_5_21390001 chr3R_21390001 RAL-370 2269 chr3R 21464382 21464427 chr3R 21464488 21464531 7 105 1.0 1.5 1.2 3.2 149 chr3R 21464382 intergenic not near genes chr3R 21464456 intergenic not near genes chr3R 21464531 intergenic not near genes chr3R_7_21460001 chr3R_21460001 RAL-370 2270 chr3R 21519966 21520131 chr3R 21520087 21520244 13 117 1.5 1.5 1.5 5.2 278 chr3R 21519966 intergenic not near genes chr3R 21520105 intergenic not near genes chr3R 21520244 intergenic not near genes chr3R_13_21520001 chr3R_21520001 RAL-370 2271 chr3R 21545597 21545634 chr3R 21545680 21545698 7 84 3.0 6.0 4.5 1.3 101 chr3R 21545597 intergenic not near genes chr3R 21545648 intergenic not near genes chr3R 21545698 intergenic not near genes chr3R_7_21545001 chr3R_21545001 RAL-370 2272 chr3R 21554043 21554077 chr3R 21554162 21554176 8 117 6.5 5.0 5.8 1.2 133 chr3R 21554043 intron slou - chr3R 21554110 intron slou - chr3R 21554176 intron slou - chr3R_8_21550001 chr3R_21550001 RAL-370 2273 chr3R 21582987 21583005 chr3R 21583108 21583121 7 120 2.5 6.0 4.2 1.3 134 chr3R 21582987 intron InR - chr3R 21583054 intron InR - chr3R 21583121 intron InR - chr3R_7_21580001 chr3R_21580001 RAL-370 2274 chr3R 21600253 21600274 chr3R 21600342 21600372 10 96 1.5 8.5 5.0 1.7 119 chr3R 21600253 intron InR - chr3R 21600312 intron InR - chr3R 21600372 intron InR - chr3R_10_21600001 chr3R_21600001 RAL-370 2275 chr3R 21624083 21624121 chr3R 21624197 21624235 7 113 2.0 1.5 1.8 2.5 152 chr3R 21624083 exon E2f - chr3R 21624159 intron E2f - chr3R 21624235 intron E2f - chr3R_7_21620001 chr3R_21620001 RAL-370 2276 chr3R 21731829 21731837 chr3R 21731956 21731964 5 127 2.0 6.0 4.0 1.0 135 chr3R 21731829 intergenic not near genes chr3R 21731896 intergenic not near genes chr3R 21731964 intergenic not near genes chr3R_5_21730001 chr3R_21730001 RAL-370 2277 chr3R 21761103 21761155 chr3R 21768515 21768565 mdg1 14 7395 4.0 7.0 5.5 2.2 7462 chr3R 21761103 exon CG42335 + chr3R 21764834 intron CG42335 + chr3R 21768565 exon CG42335 + chr3R_14_21760001 chr3R_21760001 RAL-370 2278 chr3R 21784847 21784866 chr3R 21784959 21784984 8 116 8.5 0.0 4.2 1.5 137 chr3R 21784847 3` UTR,3` UTR CASK -,CRG - chr3R 21784916 3` UTR,3` UTR CASK -,CRG - chr3R 21784984 3` UTR,3` UTR CASK -,CRG - chr3R_8_21780001 chr3R_21780001 RAL-370 2279 chr3R 21800470 21800516 chr3R 21800574 21800621 12 101 3.5 3.5 3.5 2.7 151 chr3R 21800470 intron CASK - chr3R 21800546 intron CASK - chr3R 21800621 intron CASK - chr3R_12_21800001 chr3R_21800001 RAL-370 2280 chr3R 21815232 21815258 chr3R 21815469 21815493 10 231 4.0 5.5 4.8 1.7 261 chr3R 21815232 intron CASK - chr3R 21815362 intron CASK - chr3R 21815493 intron CASK - chr3R_10_21815001 chr3R_21815001 RAL-370 2281 chr3R 21815259 21815282 chr3R 21815468 21815520 11 226 2.5 5.0 3.8 2.3 261 chr3R 21815259 intron CASK - chr3R 21815390 intron CASK - chr3R 21815520 intron CASK - chr3R_11_21815001 chr3R_21815001 RAL-370 2282 chr3R 21838801 21838850 chr3R 21839122 21839163 11 320 4.5 3.5 4.0 2.2 362 chr3R 21838801 intergenic not near genes chr3R 21838982 intergenic not near genes chr3R 21839163 intergenic not near genes chr3R_11_21835001 chr3R_21835001 RAL-370 2283 chr3R 21883951 21883974 chr3R 21884049 21884070 16 96 2.0 3.0 2.5 4.6 119 chr3R 21883951 intron,3` UTR,3` UTR CR45046 -,CG31465 +,fit - chr3R 21884010 intron,3` UTR CR45046 -,fit - chr3R 21884070 3` UTR,exon CR45046 -,fit - chr3R_16_21880001 chr3R_21880001 RAL-370 2284 chr3R 21907534 21907534 chr3R 28831801 28831804 14 6924268 31.0 13.5 22.2 0.6 6924270 chr3R 21907534 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831804 intron WASp - chr3R_14_25365001 chr3R_25365001 RAL-370 2285 chr3R 21907535 21907535 chr3R 28831801 28831802 11 6924266 31.0 13.5 22.2 0.5 6924267 chr3R 21907535 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_11_25365001 chr3R_25365001 RAL-370 2286 chr3R 21907536 21907536 chr3R 28831801 28831802 14 6924266 31.5 13.5 22.5 0.6 6924266 chr3R 21907536 intergenic CG6678 + chr3R 25369669 intron Fur1 - chr3R 28831802 intron WASp - chr3R_14_25365001 chr3R_25365001 RAL-370 2287 chr3R 21944391 21944399 chr3R 21944488 21944496 4 96 7.0 5.5 6.2 0.6 105 chr3R 21944391 intergenic not near genes chr3R 21944444 intergenic not near genes chr3R 21944496 intergenic not near genes chr3R_4_21940001 chr3R_21940001 RAL-370 2288 chr3R 21985210 21985251 chr3R 21985333 21985357 11 123 3.0 1.5 2.2 3.4 147 chr3R 21985210 intron Eip93F + chr3R 21985284 intron Eip93F + chr3R 21985357 intron Eip93F + chr3R_11_21985001 chr3R_21985001 RAL-370 2289 chr3R 22081536 22081554 chr3R 22081627 22081651 4 96 1.0 4.5 2.8 1.1 115 chr3R 22081536 intron CG13408 + chr3R 22081594 intron CG13408 + chr3R 22081651 intron CG13408 + chr3R_4_22080001 chr3R_22080001 RAL-370 2290 chr3R 22084606 22084625 chr3R 22084715 22084734 6 109 0.5 3.0 1.8 2.1 128 chr3R 22084606 intergenic not near genes chr3R 22084670 intergenic not near genes chr3R 22084734 intergenic not near genes chr3R_6_22080001 chr3R_22080001 RAL-370 2291 chr3R 22192487 22192542 chr3R 22192726 22192757 25 231 4.0 6.0 5.0 4.2 270 chr3R 22192487 intron SKIP + chr3R 22192622 intron SKIP + chr3R 22192757 intron SKIP + chr3R_25_22190001 chr3R_22190001 RAL-370 2292 chr3R 22234675 22234707 chr3R 22236014 22236045 pogo 11 1336 2.0 2.0 2.0 3.7 1370 chr3R 22234675 intron SKIP + chr3R 22235360 intron SKIP + chr3R 22236045 intron SKIP + chr3R_11_22235001 chr3R_22235001 RAL-370 2293 chr3R 22239477 22239522 chr3R 22248557 22248590 roo 4 9073 5.0 1.5 3.2 1.0 9113 chr3R 22239477 intron SKIP + chr3R 22244034 intron SKIP + chr3R 22248590 intron SKIP + chr3R_4_22240001 chr3R_22240001 RAL-370 2294 chr3R 22272330 22272372 chr3R 22272432 22272474 19 99 6.0 3.5 4.8 3.3 144 chr3R 22272330 intron SKIP + chr3R 22272402 intron SKIP + chr3R 22272474 intron SKIP + chr3R_19_22270001 chr3R_22270001 RAL-370 2295 chr3R 22433074 22433097 chr3R 22433194 22433215 7 119 10.0 9.0 9.5 0.7 141 chr3R 22433074 intron CG13847 - chr3R 22433144 intron CG13847 - chr3R 22433215 intron CG13847 - chr3R_7_22430001 chr3R_22430001 RAL-370 2296 chr3R 22437780 22437821 chr3R 22437884 22437910 14 107 1.0 3.5 2.2 4.4 130 chr3R 22437780 intergenic not near genes chr3R 22437845 intergenic not near genes chr3R 22437910 intergenic not near genes chr3R_14_22435001 chr3R_22435001 RAL-370 2297 chr3R 22450528 22450571 chr3R 22453188 22453188 NOF 16 2654 5.5 8.0 6.8 2.1 2660 chr3R 22450528 intron CG34376 + chr3R 22451858 intron CG34376 + chr3R 22453188 intron CG34376 + chr3R_16_22450001 chr3R_22450001 RAL-370 2298 chr3R 22580648 22580673 chr3R 22580726 22580763 8 86 3.0 2.0 2.5 2.3 115 chr3R 22580648 intergenic CSN6 +,CG33110 + chr3R 22580706 intergenic CSN6 +,CG33110 + chr3R 22580763 intergenic CSN6 +,CG33110 + chr3R_8_22580001 chr3R_22580001 RAL-370 2299 chr3R 22659660 22659709 chr3R 22660021 22660071 15 362 2.0 6.0 4.0 3.0 411 chr3R 22659660 intron wake + chr3R 22659866 intron wake + chr3R 22660071 intron wake + chr3R_15_22655001 chr3R_22655001 RAL-370 2300 chr3R 22684186 22684241 chr3R 22684282 22684337 11 94 4.0 6.5 5.2 1.8 151 chr3R 22684186 intergenic not near genes chr3R 22684262 intergenic not near genes chr3R 22684337 intergenic not near genes chr3R_11_22680001 chr3R_22680001 RAL-370 2301 chr3R 22794500 22794551 chr3R 22794593 22794646 18 92 6.0 4.5 5.2 2.9 146 chr3R 22794500 intergenic CG7029 + chr3R 22794573 intergenic not near genes chr3R 22794646 intergenic not near genes chr3R_18_22790001 chr3R_22790001 RAL-370 2302 chr3R 22835798 22835850 chr3R 22835900 22835941 16 99 3.0 6.0 4.5 2.9 143 chr3R 22835798 intergenic not near genes chr3R 22835870 intergenic not near genes chr3R 22835941 intergenic not near genes chr3R_16_22835001 chr3R_22835001 RAL-370 2303 chr3R 22840802 22840816 chr3R 22841281 22841298 6 482 12.0 4.0 8.0 0.7 496 chr3R 22840802 intergenic not near genes chr3R 22841050 intergenic not near genes chr3R 22841298 intergenic not near genes chr3R_6_22840001 chr3R_22840001 RAL-370 2304 chr3R 22840822 22840848 chr3R 22841275 22841285 10 465 5.0 2.5 3.8 2.1 463 chr3R 22840822 intergenic not near genes chr3R 22841054 intergenic not near genes chr3R 22841285 intergenic not near genes chr3R_10_22840001 chr3R_22840001 RAL-370 2305 chr3R 22842372 22842408 chr3R 22842490 22842527 10 118 5.0 4.5 4.8 1.7 155 chr3R 22842372 intergenic not near genes chr3R 22842450 intergenic not near genes chr3R 22842527 intergenic not near genes chr3R_10_22840001 chr3R_22840001 RAL-370 2306 chr3R 22860132 22860168 chr3R 22860244 22860280 8 112 1.5 2.0 1.8 2.9 148 chr3R 22860132 intergenic not near genes chr3R 22860206 intergenic not near genes chr3R 22860280 intergenic not near genes chr3R_8_22860001 chr3R_22860001 RAL-370 2307 chr3R 22877297 22877309 chr3R 22877444 22877452 6 145 7.0 7.0 7.0 0.8 155 chr3R 22877297 intergenic not near genes chr3R 22877374 intergenic not near genes chr3R 22877452 intergenic not near genes chr3R_6_22875001 chr3R_22875001 RAL-370 2308 chr3R 22877315 22877329 chr3R 22877436 22877477 4 141 2.0 6.5 4.2 0.8 162 chr3R 22877315 intergenic not near genes chr3R 22877396 intergenic not near genes chr3R 22877477 intergenic not near genes chr3R_4_22875001 chr3R_22875001 RAL-370 2309 chr3R 22927859 22927902 chr3R 22927974 22928004 4 104 1.5 9.0 5.2 0.6 145 chr3R 22927859 intron klg + chr3R 22927932 intron klg + chr3R 22928004 intron klg + chr3R_4_22925001 chr3R_22925001 RAL-370 2310 chr3R 22945944 22945949 chr3R 22946044 22946049 4 100 4.0 4.5 4.2 0.8 105 chr3R 22945944 intron klg + chr3R 22945996 intron klg + chr3R 22946049 intron klg + chr3R_4_22945001 chr3R_22945001 RAL-370 2311 chr3R 22950317 22950368 chr3R 22950709 22950760 28 391 2.0 1.5 1.8 10.0 443 chr3R 22950317 intron klg + chr3R 22950538 intron klg + chr3R 22950760 intron klg + chr3R_28_22950001 chr3R_22950001 RAL-370 2312 chr3R 22993487 22993536 chr3R 22993641 22993662 14 151 3.5 4.5 4.0 2.8 175 chr3R 22993487 intron Nha2 - chr3R 22993574 intron Nha2 - chr3R 22993662 intron Nha2 - chr3R_14_22990001 chr3R_22990001 RAL-370 2313 chr3R 23070641 23070700 chr3R 23070741 23070798 9 99 0.0 0.0 0.0 9.0 157 chr3R 23070641 3` UTR CG13830 - chr3R 23070720 3` UTR CG13830 - chr3R 23070798 3` UTR CG13830 - chr3R_9_23070001 chr3R_23070001 RAL-370 2314 chr3R 23073648 23073688 chr3R 23073748 23073795 8 102 4.0 4.5 4.2 1.5 147 chr3R 23073648 intron CG13830 - chr3R 23073722 intron CG13830 - chr3R 23073795 intron CG13830 - chr3R_8_23070001 chr3R_23070001 RAL-370 2315 chr3R 23197940 23197966 chr3R 23198039 23198065 12 99 6.0 3.5 4.8 2.1 125 chr3R 23197940 exon cnc - chr3R 23198002 intron cnc - chr3R 23198065 intron cnc - chr3R_12_23195001 chr3R_23195001 RAL-370 2316 chr3R 23346844 23346873 chr3R 23346942 23346971 6 98 2.0 2.5 2.2 1.9 127 chr3R 23346844 intergenic not near genes chr3R 23346908 intergenic not near genes chr3R 23346971 intergenic not near genes chr3R_6_23345001 chr3R_23345001 RAL-370 2317 chr3R 23390946 23390951 chr3R 23391048 23391052 4 102 2.5 0.0 1.2 1.8 106 chr3R 23390946 intergenic CR43387 + chr3R 23390999 intergenic CR43387 + chr3R 23391052 intergenic CR43387 + chr3R_4_23390001 chr3R_23390001 RAL-370 2318 chr3R 23412778 23412790 chr3R 23413341 23413353 6 560 2.0 7.0 4.5 1.1 575 chr3R 23412778 intron CG4374 - chr3R 23413066 intron CG4374 - chr3R 23413353 intron CG4374 - chr3R_6_23410001 chr3R_23410001 RAL-370 2319 chr3R 23540764 23540811 chr3R 23540870 23540922 17 103 2.5 4.0 3.2 4.0 158 chr3R 23540764 intergenic not near genes chr3R 23540843 intergenic not near genes chr3R 23540922 intergenic not near genes chr3R_17_23540001 chr3R_23540001 RAL-370 2320 chr3R 23558379 23558423 chr3R 23560180 23560224 Bari1 14 1800 5.0 3.5 4.2 2.7 1845 chr3R 23558379 intron beat-IV + chr3R 23559302 intron beat-IV + chr3R 23560224 intron beat-IV + chr3R_14_23555001 chr3R_23555001 RAL-370 2321 chr3R 23564421 23564475 chr3R 23564585 23564639 18 162 4.0 5.0 4.5 3.3 218 chr3R 23564421 intron beat-IV + chr3R 23564530 intron beat-IV + chr3R 23564639 intron beat-IV + chr3R_18_23560001 chr3R_23560001 RAL-370 2322 chr3R 23644816 23644867 chr3R 23645108 23645160 6 282 2.0 4.0 3.0 1.5 344 chr3R 23644816 intron CG31145 - chr3R 23644988 intron CG31145 - chr3R 23645160 intron CG31145 - chr3R_6_23640001 chr3R_23640001 RAL-370 2323 chr3R 23664955 23664981 chr3R 23665058 23665060 6 98 3.0 0.5 1.8 2.1 105 chr3R 23664955 intron CG31145 - chr3R 23665008 intron CG31145 - chr3R 23665060 intron CG31145 - chr3R_6_23665001 chr3R_23665001 RAL-370 2324 chr3R 23714060 23714069 chr3R 23714166 23714175 6 106 8.0 0.5 4.2 1.2 115 chr3R 23714060 intron nau - chr3R 23714118 intron nau - chr3R 23714175 intron nau - chr3R_6_23710001 chr3R_23710001 RAL-370 2325 chr3R 23733801 23733822 chr3R 23734027 23734055 7 228 9.5 2.5 6.0 1.0 254 chr3R 23733801 5` UTR Hmgcr + chr3R 23733928 intron Hmgcr + chr3R 23734055 intron Hmgcr + chr3R_7_23730001 chr3R_23730001 RAL-370 2326 chr3R 23733825 23733841 chr3R 23734024 23734052 7 217 6.0 2.5 4.2 1.3 227 chr3R 23733825 5` UTR Hmgcr + chr3R 23733938 intron Hmgcr + chr3R 23734052 intron Hmgcr + chr3R_7_23730001 chr3R_23730001 RAL-370 2327 chr3R 23835390 23835404 chr3R 23844560 23844574 roo 4 9170 5.5 0.0 2.8 1.1 9184 chr3R 23835390 intron CG34355 + chr3R 23839982 intron CG34355 + chr3R 23844574 intron CG34355 + chr3R_4_23835001 chr3R_23835001 RAL-370 2328 chr3R 23851070 23851080 chr3R 23858757 23858767 opus 4 7686 3.5 5.0 4.2 0.8 7697 chr3R 23851070 3` UTR CG34355 + chr3R 23854918 intergenic not near genes chr3R 23858767 intergenic not near genes chr3R_4_23850001 chr3R_23850001 RAL-370 2329 chr3R 23865019 23865065 chr3R 23865127 23865171 15 108 2.5 6.0 4.2 2.9 152 chr3R 23865019 intron Pli - chr3R 23865095 intron Pli - chr3R 23865171 intron Pli - chr3R_15_23865001 chr3R_23865001 RAL-370 2330 chr3R 23888093 23888114 chr3R 23888175 23888220 10 102 2.0 5.5 3.8 2.1 127 chr3R 23888093 intron Pli - chr3R 23888156 intron Pli - chr3R 23888220 intron Pli - chr3R_10_23885001 chr3R_23885001 RAL-370 2331 chr3R 23944895 23944935 chr3R 23944997 23945017 16 101 2.5 1.0 1.8 5.7 122 chr3R 23944895 intron CG12268 - chr3R 23944956 intron CG12268 - chr3R 23945017 exon CG12268 - chr3R_16_23940001 chr3R_23940001 RAL-370 2332 chr3R 23949025 23949075 chr3R 23949121 23949172 14 97 2.5 3.5 3.0 3.5 147 chr3R 23949025 intergenic not near genes chr3R 23949098 intergenic not near genes chr3R 23949172 intergenic not near genes chr3R_14_23945001 chr3R_23945001 RAL-370 2333 chr3R 24015040 24015092 chr3R 24015135 24015161 8 90 4.5 2.0 3.2 1.9 121 chr3R 24015040 intron KrT95D - chr3R 24015100 intron KrT95D - chr3R 24015161 intron KrT95D - chr3R_8_24015001 chr3R_24015001 RAL-370 2334 chr3R 24021610 24021656 chr3R 24021720 24021766 10 110 3.0 3.0 3.0 2.5 156 chr3R 24021610 intron KrT95D - chr3R 24021688 intron KrT95D - chr3R 24021766 intron KrT95D - chr3R_10_24020001 chr3R_24020001 RAL-370 2335 chr3R 24072079 24072123 chr3R 24072524 24072578 jockey 4 443 1.0 0.0 0.5 2.7 499 chr3R 24072079 intron 4EHP - chr3R 24072328 intron 4EHP - chr3R 24072578 intron 4EHP - chr3R_4_24070001 chr3R_24070001 RAL-370 2336 chr3R 24076897 24076946 chr3R 24078384 24078423 hobo 10 1486 4.5 4.5 4.5 1.8 1526 chr3R 24076897 intron 4EHP - chr3R 24077660 intron 4EHP - chr3R 24078423 intron 4EHP - chr3R_10_24075001 chr3R_24075001 RAL-370 2337 chr3R 24199717 24199770 chr3R 24199817 24199869 13 100 4.0 3.5 3.8 2.7 152 chr3R 24199717 intron twin - chr3R 24199793 intron twin - chr3R 24199869 intron twin - chr3R_13_24195001 chr3R_24195001 RAL-370 2338 chr3R 24207202 24207244 chr3R 24212297 24212340 flea 15 5092 5.0 8.5 6.8 1.9 5138 chr3R 24207202 intron twin - chr3R 24209771 intron twin - chr3R 24212340 intron twin - chr3R_15_24205001 chr3R_24205001 RAL-370 2339 chr3R 24431585 24431627 chr3R 24431684 24431703 12 96 5.5 0.0 2.8 3.2 118 chr3R 24431585 intron nAChRalpha1 - chr3R 24431644 intron nAChRalpha1 - chr3R 24431703 intron nAChRalpha1 - chr3R_12_24430001 chr3R_24430001 RAL-370 2340 chr3R 24493258 24493303 chr3R 24493507 24493552 BS 12 248 4.0 7.5 5.8 1.8 294 chr3R 24493258 intergenic not near genes chr3R 24493405 intergenic not near genes chr3R 24493552 intergenic not near genes chr3R_12_24490001 chr3R_24490001 RAL-370 2341 chr3R 24527790 24527836 chr3R 24527900 24527947 12 110 2.0 2.5 2.2 3.8 157 chr3R 24527790 intergenic CG6607 +,CG13618 + chr3R 24527868 intergenic CG6607 +,CG13618 + chr3R 24527947 intergenic CG6607 +,CG13618 + chr3R_12_24525001 chr3R_24525001 RAL-370 2342 chr3R 24579347 24579371 chr3R 24579445 24579473 9 99 0.5 4.5 2.5 2.6 126 chr3R 24579347 intron CG13624 - chr3R 24579410 intron CG13624 - chr3R 24579473 intron CG13624 - chr3R_9_24575001 chr3R_24575001 RAL-370 2343 chr3R 24605527 24605556 chr3R 24605647 24605675 7 118 7.5 7.0 7.2 0.9 148 chr3R 24605527 intron mld + chr3R 24605601 intron mld + chr3R 24605675 intron mld + chr3R_7_24605001 chr3R_24605001 RAL-370 2344 chr3R 24667590 24667624 chr3R 24667687 24667717 4 96 2.0 0.0 1.0 2.0 127 chr3R 24667590 intron slo + chr3R 24667654 intron slo + chr3R 24667717 intron slo + chr3R_4_24665001 chr3R_24665001 RAL-370 2345 chr3R 24730090 24730104 chr3R 24732485 24732496 Doc 4 2396 6.0 0.0 3.0 1.0 2406 chr3R 24730090 intron tok + chr3R 24731293 intron tok + chr3R 24732496 intron tok + chr3R_4_24730001 chr3R_24730001 RAL-370 2346 chr3R 24743014 24743063 chr3R 24743114 24743162 8 103 3.5 2.0 2.8 2.1 148 chr3R 24743014 intron tok + chr3R 24743088 intron tok + chr3R 24743162 exon tok + chr3R_8_24740001 chr3R_24740001 RAL-370 2347 chr3R 24789964 24790010 chr3R 24790127 24790132 16 159 3.5 1.0 2.2 5.0 168 chr3R 24789964 intron,5` UTR Ets96B +,CG13634 - chr3R 24790048 intron,5` UTR Ets96B +,CG13634 - chr3R 24790132 intron,5` UTR Ets96B +,CG13634 - chr3R_16_24790001 chr3R_24790001 RAL-370 2348 chr3R 24912459 24912510 chr3R 24912561 24912612 12 102 1.0 3.5 2.2 3.8 153 chr3R 24912459 intergenic not near genes chr3R 24912536 intergenic CR44267 + chr3R 24912612 intergenic CR44267 + chr3R_12_24910001 chr3R_24910001 RAL-370 2349 chr3R 24927123 24927151 chr3R 24931931 24931962 Doc 9 4807 4.0 4.5 4.2 1.7 4839 chr3R 24927123 intergenic Trf4-2 + chr3R 24929542 intergenic not near genes chr3R 24931962 intergenic CG11771 + chr3R_9_24925001 chr3R_24925001 RAL-370 2350 chr3R 24969467 24969500 chr3R 24969598 24969630 12 131 2.0 3.5 2.8 3.2 163 chr3R 24969467 intergenic not near genes chr3R 24969548 intergenic not near genes chr3R 24969630 intergenic not near genes chr3R_12_24965001 chr3R_24965001 RAL-370 2351 chr3R 24973932 24973964 chr3R 24974028 24974059 12 95 11.5 10.5 11.0 1.0 127 chr3R 24973932 intergenic not near genes chr3R 24973996 intergenic not near genes chr3R 24974059 intergenic not near genes chr3R_12_24970001 chr3R_24970001 RAL-370 2352 chr3R 24973970 24973980 chr3R 24974026 24974066 5 86 9.5 10.5 10.0 0.5 96 chr3R 24973970 intergenic not near genes chr3R 24974018 intergenic not near genes chr3R 24974066 intergenic not near genes chr3R_5_24970001 chr3R_24970001 RAL-370 2353 chr3R 25088074 25088078 chr3R 25088173 25088174 4 98 0.0 14.5 7.2 0.5 100 chr3R 25088074 intergenic not near genes chr3R 25088124 intergenic not near genes chr3R 25088174 intergenic not near genes chr3R_4_25085001 chr3R_25085001 RAL-370 2354 chr3R 25209580 25209630 chr3R 25209682 25209731 16 101 0.0 2.0 1.0 8.0 151 chr3R 25209580 intron CG13654 + chr3R 25209656 intron CG13654 + chr3R 25209731 intron CG13654 + chr3R_16_25205001 chr3R_25205001 RAL-370 2355 chr3R 25215680 25215731 chr3R 25215779 25215829 11 95 3.0 2.0 2.5 3.1 149 chr3R 25215680 intergenic CG13663 - chr3R 25215754 intergenic not near genes chr3R 25215829 intergenic CG31106 + chr3R_11_25215001 chr3R_25215001 RAL-370 2356 chr3R 25368454 25368486 chr3R 25368592 25368624 10 138 3.0 0.0 1.5 4.0 170 chr3R 25368454 intron Fur1 - chr3R 25368539 intron Fur1 - chr3R 25368624 intron Fur1 - chr3R_10_25365001 chr3R_25365001 RAL-370 2357 chr3R 25422048 25422087 chr3R 25422148 25422182 11 99 5.5 0.0 2.8 2.9 134 chr3R 25422048 intron Fur1 - chr3R 25422115 intron Fur1 - chr3R 25422182 intron Fur1 - chr3R_11_25420001 chr3R_25420001 RAL-370 2358 chr3R 25545947 25545985 chr3R 25546043 25546081 4 96 3.0 1.5 2.2 1.2 134 chr3R 25545947 intron msi + chr3R 25546014 intron msi + chr3R 25546081 intron msi + chr3R_4_25545001 chr3R_25545001 RAL-370 2359 chr3R 25637247 25637271 chr3R 25637367 25637393 8 122 1.0 5.0 3.0 2.0 146 chr3R 25637247 intergenic not near genes chr3R 25637320 intergenic not near genes chr3R 25637393 intergenic jigr1 + chr3R_8_25635001 chr3R_25635001 RAL-370 2360 chr3R 25701883 25701901 chr3R 25702043 25702061 5 160 3.5 0.5 2.0 1.7 178 chr3R 25701883 intron LpR2 - chr3R 25701972 intron LpR2 - chr3R 25702061 intron LpR2 - chr3R_5_25700001 chr3R_25700001 RAL-370 2361 chr3R 25720785 25720831 chr3R 25720897 25720933 8 101 0.0 7.0 3.5 1.8 148 chr3R 25720785 intron LpR2 - chr3R 25720859 intron LpR2 - chr3R 25720933 intron LpR2 - chr3R_8_25720001 chr3R_25720001 RAL-370 2362 chr3R 25725813 25725857 chr3R 25734993 25735037 roo 11 9179 0.5 3.0 1.8 3.9 9224 chr3R 25725813 intron LpR2 - chr3R 25730425 intron LpR2 - chr3R 25735037 intron LpR2 - chr3R_11_25730001 chr3R_25730001 RAL-370 2363 chr3R 25738616 25738663 chr3R 25738720 25738769 15 107 4.5 4.0 4.2 2.9 153 chr3R 25738616 intron LpR2 - chr3R 25738692 intron LpR2 - chr3R 25738769 intron LpR2 - chr3R_15_25735001 chr3R_25735001 RAL-370 2364 chr3R 25763757 25763791 chr3R 25764052 25764090 12 300 6.0 2.5 4.2 2.3 333 chr3R 25763757 intergenic not near genes chr3R 25763924 intergenic not near genes chr3R 25764090 intergenic not near genes chr3R_12_25760001 chr3R_25760001 RAL-370 2365 chr3R 25765864 25765907 chr3R 25765954 25766003 8 86 8.5 7.0 7.8 0.9 139 chr3R 25765864 intergenic not near genes chr3R 25765934 intergenic not near genes chr3R 25766003 intergenic not near genes chr3R_8_25765001 chr3R_25765001 RAL-370 2366 chr3R 25766466 25766511 chr3R 25766635 25766680 17 164 2.0 4.0 3.0 4.2 214 chr3R 25766466 intergenic not near genes chr3R 25766573 intergenic not near genes chr3R 25766680 intergenic not near genes chr3R_17_25765001 chr3R_25765001 RAL-370 2367 chr3R 25782014 25782027 chr3R 25782102 25782109 5 88 5.5 6.0 5.8 0.7 95 chr3R 25782014 intergenic not near genes chr3R 25782062 intergenic not near genes chr3R 25782109 intergenic not near genes chr3R_5_25780001 chr3R_25780001 RAL-370 2368 chr3R 25782031 25782046 chr3R 25782092 25782142 9 90 4.5 5.0 4.8 1.6 111 chr3R 25782031 intergenic not near genes chr3R 25782086 intergenic not near genes chr3R 25782142 intergenic not near genes chr3R_9_25780001 chr3R_25780001 RAL-370 2369 chr3R 25808096 25808106 chr3R 25808226 25808249 5 133 36.5 34.5 35.5 0.1 153 chr3R 25808096 5` UTR CR45652 + chr3R 25808172 5` UTR CR45652 + chr3R 25808249 5` UTR CR45652 + chr3R_5_25805001 chr3R_25805001 RAL-370 2370 chr3R 25832680 25832723 chr3R 25841881 25841911 roo 9 9196 1.5 4.5 3.0 2.2 9231 chr3R 25832680 exon alpha4GT2 + chr3R 25837296 intron alpha4GT2 + chr3R 25841911 exon alpha4GT2 + chr3R_9_25835001 chr3R_25835001 RAL-370 2371 chr3R 25843633 25843668 chr3R 25843783 25843818 7 149 0.5 9.0 4.8 1.2 185 chr3R 25843633 intergenic CR45653 + chr3R 25843726 intergenic CR45653 + chr3R 25843818 intergenic CR45653 + chr3R_7_25840001 chr3R_25840001 RAL-370 2372 chr3R 25900878 25900933 chr3R 25903575 25903630 14 2700 37.0 41.0 39.0 0.3 2752 chr3R 25900878 exon CG31091 + chr3R 25902254 intergenic CG31091 +,CG31089 + chr3R 25903630 exon,intron CG31089 +,CR43259 - chr3R_14_25900001 chr3R_25900001 RAL-370 2373 chr3R 25920838 25920881 chr3R 25920939 25920982 16 100 4.5 0.0 2.2 5.0 144 chr3R 25920838 exon CG42235 + chr3R 25920910 3` UTR CG42235 + chr3R 25920982 3` UTR CG42235 + chr3R_16_25920001 chr3R_25920001 RAL-370 2374 chr3R 26103803 26103838 chr3R 26104163 26104181 8 357 1.5 2.5 2.0 2.7 378 chr3R 26103803 intergenic not near genes chr3R 26103992 intergenic not near genes chr3R 26104181 intergenic not near genes chr3R_8_26100001 chr3R_26100001 RAL-370 2375 chr3R 26122442 26122480 chr3R 26122538 26122576 9 95 3.5 6.0 4.8 1.6 134 chr3R 26122442 intron CG31324 + chr3R 26122509 intron CG31324 + chr3R 26122576 intron CG31324 + chr3R_9_26120001 chr3R_26120001 RAL-370 2376 chr3R 26148680 26148715 chr3R 26148780 26148815 13 99 2.0 3.5 2.8 3.4 135 chr3R 26148680 intergenic not near genes chr3R 26148748 intergenic not near genes chr3R 26148815 intergenic not near genes chr3R_13_26145001 chr3R_26145001 RAL-370 2377 chr3R 26229209 26229255 chr3R 26229307 26229361 8 93 3.0 1.0 2.0 2.7 152 chr3R 26229209 intergenic not near genes chr3R 26229285 intergenic not near genes chr3R 26229361 intergenic not near genes chr3R_8_26225001 chr3R_26225001 RAL-370 2378 chr3R 26239810 26239857 chr3R 26240141 26240188 15 331 2.5 2.0 2.2 4.7 378 chr3R 26239810 intron CR42745 + chr3R 26239999 intron CR42745 + chr3R 26240188 intron CR42745 + chr3R_15_26235001 chr3R_26235001 RAL-370 2379 chr3R 26292096 26292131 chr3R 26292196 26292231 8 98 4.0 4.5 4.2 1.5 135 chr3R 26292096 intergenic not near genes chr3R 26292164 intergenic not near genes chr3R 26292231 intergenic not near genes chr3R_8_26290001 chr3R_26290001 RAL-370 2380 chr3R 26365089 26365141 chr3R 26365194 26365245 9 104 3.0 2.5 2.8 2.4 156 chr3R 26365089 intergenic not near genes chr3R 26365167 intergenic not near genes chr3R 26365245 intergenic not near genes chr3R_9_26365001 chr3R_26365001 RAL-370 2381 chr3R 26370324 26370352 chr3R 26370429 26370455 5 105 0.0 6.0 3.0 1.2 131 chr3R 26370324 intergenic not near genes chr3R 26370390 intergenic not near genes chr3R 26370455 intergenic not near genes chr3R_5_26370001 chr3R_26370001 RAL-370 2382 chr3R 26376308 26376344 chr3R 26385485 26385490 roo 14 9174 7.0 0.0 3.5 3.1 9182 chr3R 26376308 intergenic not near genes chr3R 26380899 intergenic not near genes chr3R 26385490 intergenic not near genes chr3R_14_26380001 chr3R_26380001 RAL-370 2383 chr3R 26405911 26405927 chr3R 26406007 26406023 5 96 2.0 3.5 2.8 1.3 112 chr3R 26405911 intergenic not near genes chr3R 26405967 intergenic not near genes chr3R 26406023 intergenic not near genes chr3R_5_26405001 chr3R_26405001 RAL-370 2384 chr3R 26413257 26413297 chr3R 26413372 26413414 8 116 4.5 6.5 5.5 1.2 157 chr3R 26413257 intergenic not near genes chr3R 26413336 intergenic not near genes chr3R 26413414 intergenic not near genes chr3R_8_26410001 chr3R_26410001 RAL-370 2385 chr3R 26503596 26503622 chr3R 26504333 26504359 4 729 19.0 33.0 26.0 0.1 763 chr3R 26503596 intron plum - chr3R 26503978 intron plum - chr3R 26504359 intron plum - chr3R_4_26500001 chr3R_26500001 RAL-370 2386 chr3R 26508906 26508946 chr3R 26509361 26509400 9 452 2.0 4.5 3.2 2.1 494 chr3R 26508906 intron plum - chr3R 26509153 intron plum - chr3R 26509400 intron plum - chr3R_9_26505001 chr3R_26505001 RAL-370 2387 chr3R 26510485 26510533 chr3R 26519566 26519614 roo 20 9081 4.5 5.0 4.8 3.4 9129 chr3R 26510485 intron plum - chr3R 26515050 intron plum - chr3R 26519614 intron,5` UTR plum -,CR45226 + chr3R_20_26515001 chr3R_26515001 RAL-370 2388 chr3R 26522605 26522652 chr3R 26522711 26522755 15 104 2.5 4.5 3.5 3.3 150 chr3R 26522605 intron plum - chr3R 26522680 intron plum - chr3R 26522755 intron plum - chr3R_15_26520001 chr3R_26520001 RAL-370 2389 chr3R 26558307 26558357 chr3R 26565639 26565689 Stalker4 9 7327 3.5 2.0 2.8 2.4 7382 chr3R 26558307 intron scrib + chr3R 26561998 intron scrib + chr3R 26565689 intron scrib + chr3R_9_26560001 chr3R_26560001 RAL-370 2390 chr3R 26571575 26571621 chr3R 26571673 26571719 9 94 3.5 4.5 4.0 1.8 144 chr3R 26571575 intron scrib + chr3R 26571647 intron scrib + chr3R 26571719 intron scrib + chr3R_9_26570001 chr3R_26570001 RAL-370 2391 chr3R 26607719 26607767 chr3R 26607814 26607861 14 92 3.0 7.0 5.0 2.3 142 chr3R 26607719 5` UTR CR44951 + chr3R 26607790 5` UTR CR44951 + chr3R 26607861 5` UTR CR44951 + chr3R_14_26605001 chr3R_26605001 RAL-370 2392 chr3R 26642717 26642756 chr3R 26643130 26643169 jockey 19 411 10.5 7.5 9.0 1.9 452 chr3R 26642717 intergenic not near genes chr3R 26642943 intergenic not near genes chr3R 26643169 intergenic not near genes chr3R_19_26640001 chr3R_26640001 RAL-370 2393 chr3R 26710810 26710855 chr3R 26710914 26710959 24 103 6.5 8.5 7.5 2.8 149 chr3R 26710810 intron amon - chr3R 26710884 intron amon - chr3R 26710959 intron amon - chr3R_24_26710001 chr3R_26710001 RAL-370 2394 chr3R 26729261 26729307 chr3R 26729359 26729404 9 99 3.5 3.5 3.5 2.0 143 chr3R 26729261 intron,3` UTR CG14246 +,CG14245 + chr3R 26729332 intron,3` UTR CG14246 +,CG14245 + chr3R 26729404 intron CG14246 + chr3R_9_26725001 chr3R_26725001 RAL-370 2395 chr3R 26770222 26770272 chr3R 26770319 26770369 18 97 5.0 5.5 5.2 2.9 147 chr3R 26770222 intergenic CR45563 + chr3R 26770296 intergenic CR45563 + chr3R 26770369 intergenic not near genes chr3R_18_26770001 chr3R_26770001 RAL-370 2396 chr3R 26810537 26810576 chr3R 26811042 26811081 roo 10 505 6.5 6.0 6.2 1.4 544 chr3R 26810537 intron Tl + chr3R 26810809 intron Tl + chr3R 26811081 intron Tl + chr3R_10_26810001 chr3R_26810001 RAL-370 2397 chr3R 26844518 26844558 chr3R 26844615 26844655 11 96 4.0 0.0 2.0 3.7 137 chr3R 26844518 intron Lerp - chr3R 26844586 intron Lerp - chr3R 26844655 intron Lerp - chr3R_11_26840001 chr3R_26840001 RAL-370 2398 chr3R 26983792 26983835 chr3R 26983895 26983938 10 103 0.0 2.0 1.0 5.0 146 chr3R 26983792 intron CG14253 + chr3R 26983865 intron CG14253 + chr3R 26983938 intron CG14253 + chr3R_10_26980001 chr3R_26980001 RAL-370 2399 chr3R 27007392 27007438 chr3R 27016547 27016547 roo 13 9149 2.0 6.5 4.2 2.5 9155 chr3R 27007392 intron RYa-R + chr3R 27011970 intron RYa-R + chr3R 27016547 intron RYa-R + chr3R_13_27010001 chr3R_27010001 RAL-370 2400 chr3R 27027660 27027703 chr3R 27027764 27027805 15 101 4.0 2.5 3.2 3.6 145 chr3R 27027660 intron RYa-R + chr3R 27027732 intron RYa-R + chr3R 27027805 intron RYa-R + chr3R_15_27025001 chr3R_27025001 RAL-370 2401 chr3R 27028702 27028756 chr3R 27028801 27028855 17 97 4.5 2.0 3.2 4.0 153 chr3R 27028702 intron RYa-R + chr3R 27028778 intron RYa-R + chr3R 27028855 intron RYa-R + chr3R_17_27025001 chr3R_27025001 RAL-370 2402 chr3R 27038422 27038469 chr3R 27039506 27039553 16 1082 2.5 3.5 3.0 4.0 1131 chr3R 27038422 intron RYa-R + chr3R 27038988 intron RYa-R + chr3R 27039553 intron RYa-R + chr3R_16_27035001 chr3R_27035001 RAL-370 2403 chr3R 27088404 27088410 chr3R 27088475 27088524 4 98 3.5 0.5 2.0 1.3 120 chr3R 27088404 intergenic not near genes chr3R 27088464 intergenic not near genes chr3R 27088524 intergenic not near genes chr3R_4_27085001 chr3R_27085001 RAL-370 2404 chr3R 27140493 27140546 chr3R 27148123 27148147 412 24 7625 3.0 5.5 4.2 4.6 7654 chr3R 27140493 intron CG6051 - chr3R 27144320 intron CG6051 - chr3R 27148147 intron CG6051 - chr3R_24_27140001 chr3R_27140001 RAL-370 2405 chr3R 27218688 27218738 chr3R 27218798 27218848 14 102 0.0 0.5 0.2 11.7 160 chr3R 27218688 intergenic not near genes chr3R 27218768 intergenic not near genes chr3R 27218848 intergenic not near genes chr3R_14_27215001 chr3R_27215001 RAL-370 2406 chr3R 27221238 27221259 chr3R 27221348 27221369 9 110 0.5 6.5 3.5 2.0 131 chr3R 27221238 intergenic not near genes chr3R 27221304 intergenic not near genes chr3R 27221369 intergenic not near genes chr3R_9_27220001 chr3R_27220001 RAL-370 2407 chr3R 27327436 27327448 chr3R 27327514 27327547 8 96 8.5 5.0 6.8 1.0 111 chr3R 27327436 intergenic not near genes chr3R 27327492 intergenic not near genes chr3R 27327547 intergenic not near genes chr3R_8_27325001 chr3R_27325001 RAL-370 2408 chr3R 27329454 27329499 chr3R 27329550 27329595 14 95 6.5 2.0 4.2 2.7 141 chr3R 27329454 intergenic CG3330 - chr3R 27329524 intergenic CG3330 - chr3R 27329595 intergenic CG3330 - chr3R_14_27325001 chr3R_27325001 RAL-370 2409 chr3R 27342771 27342825 chr3R 27351372 27351426 Tirant 12 8596 5.5 7.0 6.2 1.7 8655 chr3R 27342771 intron CG42534 + chr3R 27347098 intron CG42534 + chr3R 27351426 intron CG42534 + chr3R_12_27345001 chr3R_27345001 RAL-370 2410 chr3R 27377452 27377492 chr3R 27377560 27377600 4 108 5.5 4.5 5.0 0.7 148 chr3R 27377452 3` UTR side - chr3R 27377526 3` UTR side - chr3R 27377600 3` UTR side - chr3R_4_27375001 chr3R_27375001 RAL-370 2411 chr3R 27398555 27398601 chr3R 27398647 27398698 5 92 0.5 2.5 1.5 2.0 143 chr3R 27398555 intron side - chr3R 27398626 intron side - chr3R 27398698 intron side - chr3R_5_27395001 chr3R_27395001 RAL-370 2412 chr3R 27448830 27448849 chr3R 27448921 27448955 6 106 2.0 2.5 2.2 1.9 125 chr3R 27448830 intergenic not near genes chr3R 27448892 intergenic not near genes chr3R 27448955 intergenic not near genes chr3R_6_27445001 chr3R_27445001 RAL-370 2413 chr3R 27478925 27478975 chr3R 27479022 27479072 23 93 4.5 3.5 4.0 4.6 147 chr3R 27478925 exon Cyp6a18 + chr3R 27478998 exon Cyp6a18 + chr3R 27479072 exon Cyp6a18 + chr3R_23_27475001 chr3R_27475001 RAL-370 2414 chr3R 27492366 27492408 chr3R 27492473 27492501 5 104 4.0 0.0 2.0 1.7 135 chr3R 27492366 intergenic not near genes chr3R 27492434 intergenic not near genes chr3R 27492501 intergenic not near genes chr3R_5_27490001 chr3R_27490001 RAL-370 2415 chr3R 27499473 27499504 chr3R 27499579 27499612 5 104 4.5 3.0 3.8 1.0 139 chr3R 27499473 intergenic not near genes chr3R 27499542 intergenic not near genes chr3R 27499612 intergenic not near genes chr3R_5_27495001 chr3R_27495001 RAL-370 2416 chr3R 27521136 27521152 chr3R 27530365 27530380 roo 6 9229 10.0 2.5 6.2 0.8 9244 chr3R 27521136 intron CG12885 + chr3R 27525758 intron CG12885 + chr3R 27530380 intron CG12885 + chr3R_6_27525001 chr3R_27525001 RAL-370 2417 chr3R 27571566 27571610 chr3R 27571687 27571730 9 114 2.5 4.5 3.5 2.0 164 chr3R 27571566 intron wdb - chr3R 27571648 intron wdb - chr3R 27571730 intron wdb - chr3R_9_27570001 chr3R_27570001 RAL-370 2418 chr3R 27627077 27627104 chr3R 27627199 27627210 5 119 5.5 2.5 4.0 1.0 133 chr3R 27627077 intron Tusp + chr3R 27627144 intron Tusp + chr3R 27627210 intron Tusp + chr3R_5_27625001 chr3R_27625001 RAL-370 2419 chr3R 27627113 27627119 chr3R 27627197 27627232 5 111 4.0 2.5 3.2 1.2 119 chr3R 27627113 intron Tusp + chr3R 27627172 intron Tusp + chr3R 27627232 intron Tusp + chr3R_5_27625001 chr3R_27625001 RAL-370 2420 chr3R 27705357 27705392 chr3R 27705456 27705490 6 89 2.0 2.0 2.0 2.0 133 chr3R 27705357 exon CG12428 - chr3R 27705424 intron CG12428 - chr3R 27705490 exon CG12428 - chr3R_6_27705001 chr3R_27705001 RAL-370 2421 chr3R 27725578 27725590 chr3R 27731008 27731053 I-element 7 5458 0.5 0.0 0.2 5.8 5475 chr3R 27725578 intergenic not near genes chr3R 27728316 intergenic not near genes chr3R 27731053 intergenic not near genes chr3R_7_27725001 chr3R_27725001 RAL-370 2422 chr3R 27789082 27789113 chr3R 27789157 27789178 5 80 2.0 2.5 2.2 1.6 96 chr3R 27789082 exon CG34353 - chr3R 27789130 intron CG34353 - chr3R 27789178 intron CG34353 - chr3R_5_27785001 chr3R_27785001 RAL-370 2423 chr3R 27799921 27799960 chr3R 27800023 27800062 20 102 4.0 3.5 3.8 4.2 141 chr3R 27799921 intron CG34353 - chr3R 27799992 intron CG34353 - chr3R 27800062 intron CG34353 - chr3R_20_27795001 chr3R_27795001 RAL-370 2424 chr3R 27856738 27856789 chr3R 27858241 27858292 hopper2 17 1502 7.5 4.0 5.8 2.5 1554 chr3R 27856738 intron CG34353 - chr3R 27857515 intron CG34353 - chr3R 27858292 intron CG34353 - chr3R_17_27855001 chr3R_27855001 RAL-370 2425 chr3R 27870274 27870329 chr3R 27870377 27870421 11 93 4.0 4.0 4.0 2.2 147 chr3R 27870274 intron CG34353 - chr3R 27870348 intron CG34353 - chr3R 27870421 intron CG34353 - chr3R_11_27870001 chr3R_27870001 RAL-370 2426 chr3R 27875680 27875729 chr3R 27882755 27882803 297 19 7073 3.5 5.0 4.2 3.7 7123 chr3R 27875680 intron CG34353 - chr3R 27879242 intron CG34353 - chr3R 27882803 intron CG34353 - chr3R_19_27875001 chr3R_27875001 RAL-370 2427 chr3R 27900432 27900469 chr3R 27900542 27900579 10 110 5.0 5.0 5.0 1.7 147 chr3R 27900432 intron CG34353 - chr3R 27900506 intron CG34353 - chr3R 27900579 intron CG34353 - chr3R_10_27900001 chr3R_27900001 RAL-370 2428 chr3R 27911227 27911255 chr3R 27911325 27911353 9 96 3.5 3.0 3.2 2.1 126 chr3R 27911227 intergenic not near genes chr3R 27911290 intergenic not near genes chr3R 27911353 intergenic not near genes chr3R_9_27910001 chr3R_27910001 RAL-370 2429 chr3R 28054430 28054473 chr3R 28054525 28054569 11 96 3.5 5.0 4.2 2.1 139 chr3R 28054430 intron CG34362 + chr3R 28054500 intron CG34362 + chr3R 28054569 intron CG34362 + chr3R_11_28050001 chr3R_28050001 RAL-370 2430 chr3R 28068485 28068520 chr3R 28073945 28073953 I-element 9 5457 2.0 2.0 2.0 3.0 5468 chr3R 28068485 intron CG34362 + chr3R 28071219 intron CG34362 + chr3R 28073953 intron CG34362 + chr3R_9_28070001 chr3R_28070001 RAL-370 2431 chr3R 28132485 28132508 chr3R 28132586 28132605 4 99 4.5 1.5 3.0 1.0 120 chr3R 28132485 intergenic not near genes chr3R 28132545 intergenic not near genes chr3R 28132605 intergenic not near genes chr3R_4_28130001 chr3R_28130001 RAL-370 2432 chr3R 28152336 28152359 chr3R 28152433 28152456 9 97 8.0 6.5 7.2 1.1 120 chr3R 28152336 intron CG34354 + chr3R 28152396 intron CG34354 + chr3R 28152456 intron CG34354 + chr3R_9_28150001 chr3R_28150001 RAL-370 2433 chr3R 28172944 28172976 chr3R 28173120 28173153 10 174 2.0 2.5 2.2 3.1 209 chr3R 28172944 intron CG34354 + chr3R 28173048 intron CG34354 + chr3R 28173153 intron CG34354 + chr3R_10_28170001 chr3R_28170001 RAL-370 2434 chr3R 28173659 28173693 chr3R 28181101 28181143 mdg1 8 7448 4.0 1.0 2.5 2.3 7484 chr3R 28173659 intron CG34354 + chr3R 28177401 intron CG34354 + chr3R 28181143 intron CG34354 + chr3R_8_28175001 chr3R_28175001 RAL-370 2435 chr3R 28215805 28215847 chr3R 28215892 28215944 10 94 7.0 2.5 4.8 1.7 139 chr3R 28215805 intron CG34354 + chr3R 28215874 intron CG34354 + chr3R 28215944 intron CG34354 + chr3R_10_28215001 chr3R_28215001 RAL-370 2436 chr3R 28253329 28253367 chr3R 28255859 28255897 jockey 8 2525 6.0 7.5 6.8 1.0 2568 chr3R 28253329 intergenic not near genes chr3R 28254613 intergenic not near genes chr3R 28255897 intergenic not near genes chr3R_8_28250001 chr3R_28250001 RAL-370 2437 chr3R 28302086 28302127 chr3R 28302545 28302585 jockey 11 458 6.5 7.5 7.0 1.4 499 chr3R 28302086 intergenic not near genes chr3R 28302336 intergenic not near genes chr3R 28302585 intergenic not near genes chr3R_11_28300001 chr3R_28300001 RAL-370 2438 chr3R 28331488 28331525 chr3R 28331587 28331624 8 99 1.0 3.0 2.0 2.7 136 chr3R 28331488 intron larp - chr3R 28331556 intron larp - chr3R 28331624 intron larp - chr3R_8_28330001 chr3R_28330001 RAL-370 2439 chr3R 28393681 28393727 chr3R 28393797 28393847 19 119 3.5 3.0 3.2 4.5 166 chr3R 28393681 intergenic not near genes chr3R 28393764 intergenic not near genes chr3R 28393847 intergenic not near genes chr3R_19_28390001 chr3R_28390001 RAL-370 2440 chr3R 28407691 28407741 chr3R 28407796 28407812 13 101 1.0 5.0 3.0 3.2 121 chr3R 28407691 intergenic not near genes chr3R 28407752 intergenic not near genes chr3R 28407812 intergenic not near genes chr3R_13_28405001 chr3R_28405001 RAL-370 2441 chr3R 28420875 28420909 chr3R 28421011 28421045 7 136 3.0 2.0 2.5 2.0 170 chr3R 28420875 intron beat-VI + chr3R 28420960 intron beat-VI + chr3R 28421045 intron beat-VI + chr3R_7_28420001 chr3R_28420001 RAL-370 2442 chr3R 28426491 28426501 chr3R 28426596 28426607 6 106 0.0 14.0 7.0 0.8 116 chr3R 28426491 intron beat-VI + chr3R 28426549 intron beat-VI + chr3R 28426607 intron beat-VI + chr3R_6_28425001 chr3R_28425001 RAL-370 2443 chr3R 28478426 28478448 chr3R 28478502 28478535 5 86 4.0 3.0 3.5 1.1 109 chr3R 28478426 intergenic not near genes chr3R 28478480 intergenic not near genes chr3R 28478535 intergenic not near genes chr3R_5_28475001 chr3R_28475001 RAL-370 2444 chr3R 28479137 28479165 chr3R 28479241 28479268 8 101 3.5 7.0 5.2 1.3 131 chr3R 28479137 intergenic not near genes chr3R 28479202 intergenic not near genes chr3R 28479268 intergenic not near genes chr3R_8_28475001 chr3R_28475001 RAL-370 2445 chr3R 28480304 28480325 chr3R 28480405 28480417 5 99 1.5 1.0 1.2 2.3 113 chr3R 28480304 intergenic not near genes chr3R 28480360 intergenic not near genes chr3R 28480417 intergenic not near genes chr3R_5_28480001 chr3R_28480001 RAL-370 2446 chr3R 28484353 28484395 chr3R 28486250 28486292 70 1901 71.5 101.5 86.5 0.8 1939 chr3R 28484353 intergenic CG1894 + chr3R 28485322 exon CG1894 + chr3R 28486292 intergenic CG1894 + chr3R_70_28485001 chr3R_28485001 RAL-370 2447 chr3R 28562892 28562926 chr3R 28563050 28563078 6 154 17.5 21.5 19.5 0.3 186 chr3R 28562892 intergenic not near genes chr3R 28562985 intergenic not near genes chr3R 28563078 intergenic not near genes chr3R_6_28560001 chr3R_28560001 RAL-370 2448 chr3R 28616459 28616503 chr3R 28616573 28616617 12 114 4.0 5.5 4.8 2.1 158 chr3R 28616459 intron CG10011 - chr3R 28616538 intron CG10011 - chr3R 28616617 intron CG10011 - chr3R_12_28615001 chr3R_28615001 RAL-370 2449 chr3R 28633176 28633222 chr3R 28633274 28633322 25 97 3.5 4.0 3.8 5.2 146 chr3R 28633176 intron CG10011 - chr3R 28633249 intron CG10011 - chr3R 28633322 intron CG10011 - chr3R_25_28630001 chr3R_28630001 RAL-370 2450 chr3R 28658117 28658130 chr3R 28658182 28658230 5 92 4.0 8.0 6.0 0.7 113 chr3R 28658117 intergenic not near genes chr3R 28658174 intergenic not near genes chr3R 28658230 intergenic not near genes chr3R_5_28655001 chr3R_28655001 RAL-370 2451 chr3R 28758264 28758285 chr3R 28763901 28763922 roo 5 5636 8.5 0.0 4.2 1.0 5658 chr3R 28758264 intergenic aqrs - chr3R 28761093 intergenic not near genes chr3R 28763922 intergenic not near genes chr3R_5_28760001 chr3R_28760001 RAL-370 2452 chr3R 28792869 28792903 chr3R 28797965 28798017 jockey 7 5104 3.5 3.5 3.5 1.6 5148 chr3R 28792869 intergenic not near genes chr3R 28795443 intergenic not near genes chr3R 28798017 intergenic not near genes chr3R_7_28795001 chr3R_28795001 RAL-370 2453 chr3R 21907534 21907536 chr3R 28831801 28831802 36 6924267 31.5 13.5 22.5 1.5 6924268 chr3R 21907534 intergenic CG6678 + chr3R 25369668 intron Fur1 - chr3R 28831802 intron WASp - chr3R_36_25365001 chr3R_25365001 RAL-370 2454 chr3R 28862128 28862152 chr3R 28862225 28862249 8 96 4.5 3.5 4.0 1.6 121 chr3R 28862128 intron spg + chr3R 28862188 intron spg + chr3R 28862249 intron spg + chr3R_8_28860001 chr3R_28860001 RAL-370 2455 chr3R 28960489 28960541 chr3R 28960594 28960646 18 105 2.5 5.5 4.0 3.6 157 chr3R 28960489 intron CG14521 - chr3R 28960568 intron CG14521 - chr3R 28960646 intron CG14521 - chr3R_18_28960001 chr3R_28960001 RAL-370 2456 chr3R 28968435 28968448 chr3R 28968492 28968545 8 87 1.5 2.5 2.0 2.7 110 chr3R 28968435 intron CG14521 - chr3R 28968490 intron CG14521 - chr3R 28968545 intron CG14521 - chr3R_8_28965001 chr3R_28965001 RAL-370 2457 chr3R 28989900 28989930 chr3R 28990091 28990125 8 194 3.0 7.0 5.0 1.3 225 chr3R 28989900 intergenic not near genes chr3R 28990012 intergenic not near genes chr3R 28990125 intergenic not near genes chr3R_8_28990001 chr3R_28990001 RAL-370 2458 chr3R 29009936 29009987 chr3R 29010062 29010103 11 125 3.0 2.5 2.8 2.9 167 chr3R 29009936 intron wat - chr3R 29010020 intron wat - chr3R 29010103 intron wat - chr3R_11_29010001 chr3R_29010001 RAL-370 2459 chr3R 29012810 29012858 chr3R 29012910 29012960 9 102 2.5 0.5 1.5 3.6 150 chr3R 29012810 intron wat - chr3R 29012885 intron wat - chr3R 29012960 intron wat - chr3R_9_29010001 chr3R_29010001 RAL-370 2460 chr3R 29032727 29032745 chr3R 29032824 29032826 10 94 10.5 4.5 7.5 1.2 99 chr3R 29032727 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032776 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032826 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R_10_29030001 chr3R_29030001 RAL-370 2461 chr3R 29032747 29032770 chr3R 29032822 29032866 13 90 7.0 4.5 5.8 1.9 119 chr3R 29032747 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032806 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R 29032866 5` UTR,3` UTR CR45044 +,beta4GalNAcTB - chr3R_13_29030001 chr3R_29030001 RAL-370 2462 chr3R 29034049 29034096 chr3R 29034466 29034511 7 415 4.0 3.5 3.8 1.5 462 chr3R 29034049 5` UTR CR45044 + chr3R 29034280 intergenic CR45044 +,beta4GalNAcTB -,Cpsf100 + chr3R 29034511 intergenic Cpsf100 +,CR45044 + chr3R_7_29030001 chr3R_29030001 RAL-370 2463 chr3R 29053723 29053740 chr3R 29054249 29054256 4 526 4.5 0.0 2.2 1.2 533 chr3R 29053723 exon CG11842 + chr3R 29053990 intergenic CG11842 +,CG11843 + chr3R 29054256 intergenic CG11843 +,CG11842 + chr3R_4_29050001 chr3R_29050001 RAL-370 2464 chr3R 29054257 29054277 chr3R 29054362 29054381 5 104 0.0 6.5 3.2 1.2 124 chr3R 29054257 intergenic CG11843 +,CG11842 + chr3R 29054319 intergenic CG11843 +,CG11842 + chr3R 29054381 5` UTR CG11843 + chr3R_5_29050001 chr3R_29050001 RAL-370 2465 chr3R 29070034 29070076 chr3R 29070135 29070176 12 100 2.5 4.5 3.5 2.7 142 chr3R 29070034 intron CG11873 + chr3R 29070105 intron CG11873 + chr3R 29070176 intron CG11873 + chr3R_12_29070001 chr3R_29070001 RAL-370 2466 chr3R 29079363 29079397 chr3R 29080753 29080789 NOF 18 1392 7.0 7.5 7.2 2.2 1426 chr3R 29079363 intron CG11873 + chr3R 29080076 intron CG11873 + chr3R 29080789 intron CG11873 + chr3R_18_29080001 chr3R_29080001 RAL-370 2467 chr3R 29157460 29157506 chr3R 29157566 29157606 18 103 3.5 6.5 5.0 3.0 146 chr3R 29157460 intergenic Rpn2 + chr3R 29157533 intergenic Rpn2 + chr3R 29157606 intergenic Rpn2 + chr3R_18_29155001 chr3R_29155001 RAL-370 2468 chr3R 29203833 29203846 chr3R 29203932 29203946 5 100 6.5 0.0 3.2 1.2 113 chr3R 29203833 5` UTR CG14508 - chr3R 29203890 intron CG14508 - chr3R 29203946 intron CG14508 - chr3R_5_29200001 chr3R_29200001 RAL-370 2469 chr3R 29213044 29213090 chr3R 29213145 29213193 21 102 6.5 4.0 5.2 3.4 149 chr3R 29213044 intergenic not near genes chr3R 29213118 intergenic not near genes chr3R 29213193 intergenic not near genes chr3R_21_29210001 chr3R_29210001 RAL-370 2470 chr3R 29237242 29237536 chr3R 29239267 29239448 13 2009 18.5 3.5 11.0 1.1 2206 chr3R 29237242 exon CG11951 - chr3R 29238345 intron CG11951 - chr3R 29239448 exon CG31427 - chr3R_13_29235001 chr3R_29235001 RAL-370 2471 chr3R 29237522 29237534 chr3R 29239410 29239428 4 1890 18.5 13.0 15.8 0.2 1906 chr3R 29237522 exon CG11951 - chr3R 29238475 intron CG11951 - chr3R 29239428 exon CG31427 - chr3R_4_29235001 chr3R_29235001 RAL-370 2472 chr3R 29240294 29240323 chr3R 29240398 29240426 4 104 5.5 0.0 2.8 1.1 132 chr3R 29240294 intron CG31427 - chr3R 29240360 5` UTR CG31427 - chr3R 29240426 intergenic CG31427 -,CG31445 - chr3R_4_29240001 chr3R_29240001 RAL-370 2473 chr3R 29249887 29249915 chr3R 29249997 29250024 7 110 5.0 4.5 4.8 1.2 137 chr3R 29249887 intron SP1029 - chr3R 29249956 intron SP1029 - chr3R 29250024 intron SP1029 - chr3R_7_29245001 chr3R_29245001 RAL-370 2474 chr3R 29319809 29319834 chr3R 29320148 29320173 jockey 10 338 4.0 7.0 5.5 1.5 364 chr3R 29319809 intergenic Cnx99A - chr3R 29319991 intergenic Cnx99A - chr3R 29320173 intergenic not near genes chr3R_10_29315001 chr3R_29315001 RAL-370 2475 chr3R 29319839 29319855 chr3R 29320139 29320194 jockey 5 323 1.5 4.5 3.0 1.2 355 chr3R 29319839 intergenic Cnx99A - chr3R 29320016 intergenic Cnx99A - chr3R 29320194 intergenic not near genes chr3R_5_29320001 chr3R_29320001 RAL-370 2476 chr3R 29356028 29356081 chr3R 29356128 29356182 7 100 4.5 1.0 2.8 1.8 154 chr3R 29356028 intergenic CR45547 - chr3R 29356105 intergenic CR45547 - chr3R 29356182 3` UTR CR45547 - chr3R_7_29355001 chr3R_29355001 RAL-370 2477 chr3R 29384168 29384191 chr3R 29384263 29384282 11 93 8.0 5.0 6.5 1.5 114 chr3R 29384168 intron Ptp99A + chr3R 29384225 intron Ptp99A + chr3R 29384282 intron Ptp99A + chr3R_11_29380001 chr3R_29380001 RAL-370 2478 chr3R 29406620 29406645 chr3R 29407906 29407926 jockey 12 1296 4.0 6.0 5.0 2.0 1306 chr3R 29406620 intron Ptp99A + chr3R 29407273 intron Ptp99A + chr3R 29407926 intron Ptp99A + chr3R_12_29405001 chr3R_29405001 RAL-370 2479 chr3R 29429770 29429787 chr3R 29429868 29429881 5 97 5.5 1.0 3.2 1.2 111 chr3R 29429770 intron Ptp99A + chr3R 29429826 intron Ptp99A + chr3R 29429881 intron Ptp99A + chr3R_5_29425001 chr3R_29425001 RAL-370 2480 chr3R 29429788 29429805 chr3R 29429867 29429903 6 92 2.5 1.0 1.8 2.1 115 chr3R 29429788 intron Ptp99A + chr3R 29429846 intron Ptp99A + chr3R 29429903 intron Ptp99A + chr3R_6_29425001 chr3R_29425001 RAL-370 2481 chr3R 29447801 29447848 chr3R 29447928 29447975 9 120 3.5 2.0 2.8 2.4 174 chr3R 29447801 intron Ptp99A + chr3R 29447888 intron Ptp99A + chr3R 29447975 intron Ptp99A + chr3R_9_29445001 chr3R_29445001 RAL-370 2482 chr3R 29452169 29452187 chr3R 29452237 29452243 5 76 2.0 2.0 2.0 1.7 74 chr3R 29452169 intron Ptp99A + chr3R 29452206 intron Ptp99A + chr3R 29452243 intron Ptp99A + chr3R_5_29450001 chr3R_29450001 RAL-370 2483 chr3R 29472003 29472024 chr3R 29472116 29472137 6 112 2.0 5.5 3.8 1.2 134 chr3R 29472003 intron Ptp99A + chr3R 29472070 intron Ptp99A + chr3R 29472137 intron Ptp99A + chr3R_6_29470001 chr3R_29470001 RAL-370 2484 chr3R 29472028 29472038 chr3R 29472111 29472151 4 105 0.0 4.0 2.0 1.3 123 chr3R 29472028 intron Ptp99A + chr3R 29472090 intron Ptp99A + chr3R 29472151 intron Ptp99A + chr3R_4_29470001 chr3R_29470001 RAL-370 2485 chr3R 29590362 29590401 chr3R 29590475 29590512 12 112 3.0 2.0 2.5 3.4 150 chr3R 29590362 exon CG31041 - chr3R 29590437 intron CG31041 - chr3R 29590512 exon CG31041 - chr3R_12_29590001 chr3R_29590001 RAL-370 2486 chr3R 29606917 29606966 chr3R 29607015 29607062 20 97 4.0 4.0 4.0 4.0 145 chr3R 29606917 intron alph + chr3R 29606990 intron alph + chr3R 29607062 intron alph + chr3R_20_29605001 chr3R_29605001 RAL-370 2487 chr3R 29738248 29738296 chr3R 29739734 29739783 hobo 19 1486 3.5 6.0 4.8 3.3 1535 chr3R 29738248 intergenic CG1969 +,CG7598 + chr3R 29739016 intron CG1969 + chr3R 29739783 5` UTR CG1969 + chr3R_19_29735001 chr3R_29735001 RAL-370 2488 chr3R 29882003 29882049 chr3R 29891180 29891226 roo 20 9175 6.0 7.5 6.8 2.6 9223 chr3R 29882003 intron CG31038 + chr3R 29886614 intron CG31038 + chr3R 29891226 intron CG31038 + chr3R_20_29885001 chr3R_29885001 RAL-370 2489 chr3R 30032143 30032176 chr3R 30032242 30032253 5 89 5.5 3.0 4.2 1.0 110 chr3R 30032143 intron Axn + chr3R 30032198 intron Axn + chr3R 30032253 intron Axn + chr3R_5_30030001 chr3R_30030001 RAL-370 2490 chr3R 30051285 30051304 chr3R 30051381 30051403 4 98 3.5 7.0 5.2 0.6 118 chr3R 30051285 intron,intron CG15528 -,CR44046 + chr3R 30051344 intron,intron CG15528 -,CR44046 + chr3R 30051403 intron,intron CG15528 -,CR44046 + chr3R_4_30050001 chr3R_30050001 RAL-370 2491 chr3R 30061817 30061853 chr3R 30061915 30061951 7 98 8.5 0.0 4.2 1.3 134 chr3R 30061817 intron sima + chr3R 30061884 intron sima + chr3R 30061951 intron sima + chr3R_7_30060001 chr3R_30060001 RAL-370 2492 chr3R 30084864 30084876 chr3R 30086351 30086360 hobo 6 1486 0.5 3.5 2.0 2.0 1496 chr3R 30084864 intron sima + chr3R 30085612 intron sima + chr3R 30086360 intron sima + chr3R_6_30085001 chr3R_30085001 RAL-370 2493 chr3R 30124943 30124979 chr3R 30125036 30125068 14 91 4.0 4.0 4.0 2.8 125 chr3R 30124943 intergenic CG45073 - chr3R 30125006 intergenic CG45073 - chr3R 30125068 intergenic CG45073 - chr3R_14_30125001 chr3R_30125001 RAL-370 2494 chr3R 30147830 30147873 chr3R 30147935 30147976 15 104 0.0 2.5 1.2 6.8 146 chr3R 30147830 intron AdoR - chr3R 30147903 intron AdoR - chr3R 30147976 intron AdoR - chr3R_15_30145001 chr3R_30145001 RAL-370 2495 chr3R 30177724 30177737 chr3R 30177861 30177874 5 136 8.0 3.0 5.5 0.8 150 chr3R 30177724 intergenic CG1983 -,CG15530 + chr3R 30177799 intergenic CG15530 +,CG1983 - chr3R 30177874 intergenic CG15530 +,CG1983 - chr3R_5_30175001 chr3R_30175001 RAL-370 2496 chr3R 30177738 30177769 chr3R 30177859 30177888 4 128 5.5 2.5 4.0 0.8 150 chr3R 30177738 intergenic CG1983 -,CG15530 + chr3R 30177813 intergenic CG15530 +,CG1983 - chr3R 30177888 5` UTR CG15530 + chr3R_4_30175001 chr3R_30175001 RAL-370 2497 chr3R 30183221 30183236 chr3R 30183324 30183365 6 125 5.0 4.5 4.8 1.0 144 chr3R 30183221 intergenic not near genes chr3R 30183293 intergenic not near genes chr3R 30183365 intergenic CR44262 - chr3R_6_30180001 chr3R_30180001 RAL-370 2498 chr3R 30217464 30217484 chr3R 30217560 30217583 5 99 7.0 6.5 6.8 0.6 119 chr3R 30217464 intergenic not near genes chr3R 30217524 intergenic not near genes chr3R 30217583 intergenic not near genes chr3R_5_30215001 chr3R_30215001 RAL-370 2499 chr3R 30260350 30260395 chr3R 30260446 30260491 23 95 2.5 3.5 3.0 5.8 141 chr3R 30260350 intergenic not near genes chr3R 30260420 intergenic not near genes chr3R 30260491 intergenic not near genes chr3R_23_30260001 chr3R_30260001 RAL-370 2500 chr3R 30287757 30287775 chr3R 30287855 30287870 4 96 6.0 3.5 4.8 0.7 113 chr3R 30287757 intron hdc + chr3R 30287814 intron hdc + chr3R 30287870 intron hdc + chr3R_4_30285001 chr3R_30285001 RAL-370 2501 chr3R 30317337 30317343 chr3R 30324941 30324955 roo 4 7607 0.5 4.5 2.5 1.1 7618 chr3R 30317337 intron hdc + chr3R 30321146 intron hdc + chr3R 30324955 intron hdc + chr3R_4_30320001 chr3R_30320001 RAL-370 2502 chr3R 30317355 30317359 chr3R 30324925 30324942 roo 4 7586 0.0 4.0 2.0 1.3 7587 chr3R 30317355 intron hdc + chr3R 30321148 intron hdc + chr3R 30324942 intron hdc + chr3R_4_30320001 chr3R_30320001 RAL-370 2503 chr3R 30330472 30330524 chr3R 30330572 30330614 13 93 2.5 3.5 3.0 3.2 142 chr3R 30330472 intron hdc + chr3R 30330543 intron hdc + chr3R 30330614 intron hdc + chr3R_13_30330001 chr3R_30330001 RAL-370 2504 chr3R 30359356 30359386 chr3R 30359489 30359538 4 147 1.0 5.0 3.0 1.0 182 chr3R 30359356 intron hdc + chr3R 30359447 intron hdc + chr3R 30359538 intron hdc + chr3R_4_30355001 chr3R_30355001 RAL-370 2505 chr3R 30375344 30375392 chr3R 30375460 30375505 7 116 0.0 2.5 1.2 3.2 161 chr3R 30375344 intergenic not near genes chr3R 30375424 intergenic not near genes chr3R 30375505 intergenic not near genes chr3R_7_30375001 chr3R_30375001 RAL-370 2506 chr3R 30396202 30396240 chr3R 30404484 30404526 roo 14 8286 5.5 5.0 5.2 2.3 8324 chr3R 30396202 intergenic not near genes chr3R 30400364 intergenic not near genes chr3R 30404526 5` UTR CR45570 + chr3R_14_30400001 chr3R_30400001 RAL-370 2507 chr3R 30456374 30456420 chr3R 30456472 30456519 15 96 1.5 2.5 2.0 5.0 145 chr3R 30456374 intergenic CG2224 - chr3R 30456446 3` UTR CG2224 - chr3R 30456519 3` UTR CG2224 - chr3R_15_30455001 chr3R_30455001 RAL-370 2508 chr3R 30457998 30458048 chr3R 30458096 30458147 16 94 5.5 2.0 3.8 3.3 149 chr3R 30457998 intron CG2224 - chr3R 30458072 intron CG2224 - chr3R 30458147 intron CG2224 - chr3R_16_30455001 chr3R_30455001 RAL-370 2509 chr3R 30480470 30480506 chr3R 30482941 30482994 jockey 5 2479 4.0 12.0 8.0 0.6 2524 chr3R 30480470 intron PH4alphaEFB + chr3R 30481732 intron PH4alphaEFB + chr3R 30482994 intron PH4alphaEFB + chr3R_5_30480001 chr3R_30480001 RAL-370 2510 chr3R 30539814 30539834 chr3R 30539910 30539930 6 95 5.0 3.5 4.2 1.2 116 chr3R 30539814 intron tmod + chr3R 30539872 intron tmod + chr3R 30539930 intron tmod + chr3R_6_30535001 chr3R_30535001 RAL-370 2511 chr3R 30548303 30548331 chr3R 30548401 30548426 9 98 5.0 8.5 6.8 1.2 123 chr3R 30548303 intron tmod + chr3R 30548364 intron tmod + chr3R 30548426 intron tmod + chr3R_9_30545001 chr3R_30545001 RAL-370 2512 chr3R 30558136 30558153 chr3R 30558236 30558254 5 100 1.0 7.5 4.2 1.0 118 chr3R 30558136 intron,intron tmod +,CG34155 - chr3R 30558195 intron,intron tmod +,CG34155 - chr3R 30558254 intron,intron tmod +,CG34155 - chr3R_5_30555001 chr3R_30555001 RAL-370 2513 chr3R 30560342 30560354 chr3R 30560440 30560453 10 96 3.5 3.0 3.2 2.4 111 chr3R 30560342 intron tmod + chr3R 30560398 intron tmod + chr3R 30560453 intron tmod + chr3R_10_30560001 chr3R_30560001 RAL-370 2514 chr3R 30560356 30560385 chr3R 30560439 30560467 19 94 1.0 3.0 2.0 6.3 111 chr3R 30560356 intron tmod + chr3R 30560412 intron tmod + chr3R 30560467 intron tmod + chr3R_19_30560001 chr3R_30560001 RAL-370 2515 chr3R 30566727 30566773 chr3R 30566842 30566882 10 110 6.0 7.0 6.5 1.3 155 chr3R 30566727 intron tmod + chr3R 30566804 intron tmod + chr3R 30566882 intron tmod + chr3R_10_30565001 chr3R_30565001 RAL-370 2516 chr3R 30627599 30627626 chr3R 30627695 30627704 6 87 7.5 6.0 6.8 0.8 105 chr3R 30627599 3` UTR CG2267 - chr3R 30627652 exon CG2267 - chr3R 30627704 exon CG2267 - chr3R_6_30625001 chr3R_30625001 RAL-370 2517 chr3R 30649842 30649872 chr3R 30649924 30649961 4 92 2.5 1.5 2.0 1.3 119 chr3R 30649842 3` UTR CG34432 + chr3R 30649902 intergenic CG34432 +,CG34433 + chr3R 30649961 5` UTR CG34433 + chr3R_4_30645001 chr3R_30645001 RAL-370 2518 chr3R 30650788 30650811 chr3R 30650905 30650928 9 117 0.0 3.0 1.5 3.6 140 chr3R 30650788 3` UTR CG34433 + chr3R 30650858 3` UTR CG34433 + chr3R 30650928 intergenic CG34433 + chr3R_9_30650001 chr3R_30650001 RAL-370 2519 chr3R 30679499 30679552 chr3R 30686987 30687041 blood 14 7488 6.5 7.0 6.8 1.8 7542 chr3R 30679499 intergenic not near genes chr3R 30683270 intergenic not near genes chr3R 30687041 intergenic not near genes chr3R_14_30680001 chr3R_30680001 RAL-370 2520 chr3R 30690143 30690190 chr3R 30690245 30690293 14 100 2.0 4.0 3.0 3.5 150 chr3R 30690143 intergenic Spn100A + chr3R 30690218 intergenic Spn100A + chr3R 30690293 intergenic Spn100A + chr3R_14_30690001 chr3R_30690001 RAL-370 2521 chr3R 30737930 30737974 chr3R 30738044 30738088 11 113 3.5 5.5 4.5 2.0 158 chr3R 30737930 intergenic not near genes chr3R 30738009 intergenic not near genes chr3R 30738088 intergenic not near genes chr3R_11_30735001 chr3R_30735001 RAL-370 2522 chr3R 30818790 30818838 chr3R 30820375 30820423 1360 6 1585 2.0 3.0 2.5 1.7 1633 chr3R 30818790 intron cindr + chr3R 30819606 intron cindr + chr3R 30820423 intron cindr + chr3R_6_30815001 chr3R_30815001 RAL-370 2523 chr3R 30859395 30859427 chr3R 30859491 30859525 10 95 5.5 2.5 4.0 2.0 130 chr3R 30859395 intergenic not near genes chr3R 30859460 intergenic not near genes chr3R 30859525 intergenic not near genes chr3R_10_30855001 chr3R_30855001 RAL-370 2524 chr3R 30952608 30952652 chr3R 30954015 30954059 13 1407 1.0 2.5 1.8 4.6 1451 chr3R 30952608 intergenic not near genes chr3R 30953334 intergenic not near genes chr3R 30954059 intergenic not near genes chr3R_13_30950001 chr3R_30950001 RAL-370 2525 chr3R 30973116 30973165 chr3R 30973295 30973346 17 179 2.0 1.5 1.8 6.1 230 chr3R 30973116 intron 5-HT7 - chr3R 30973231 intron 5-HT7 - chr3R 30973346 intron 5-HT7 - chr3R_17_30970001 chr3R_30970001 RAL-370 2526 chr3R 31042093 31042144 chr3R 31042200 31042251 15 107 4.5 3.5 4.0 3.0 158 chr3R 31042093 intron CanA1 + chr3R 31042172 intron CanA1 + chr3R 31042251 intron CanA1 + chr3R_15_31040001 chr3R_31040001 RAL-370 2527 chr3R 31070841 31070876 chr3R 31070933 31070950 9 90 1.5 1.0 1.2 4.1 109 chr3R 31070841 intron Sox100B + chr3R 31070896 intron Sox100B + chr3R 31070950 intron Sox100B + chr3R_9_31070001 chr3R_31070001 RAL-370 2528 chr3R 31072976 31072996 chr3R 31073183 31073221 7 227 3.0 4.5 3.8 1.5 245 chr3R 31072976 intron Sox100B + chr3R 31073098 intron Sox100B + chr3R 31073221 exon Sox100B + chr3R_7_31070001 chr3R_31070001 RAL-370 2529 chr3R 31074214 31074257 chr3R 31081828 31081875 springer 10 7618 5.0 3.0 4.0 2.0 7661 chr3R 31074214 intron Sox100B + chr3R 31078044 intron Sox100B + chr3R 31081875 intron Sox100B + chr3R_10_31075001 chr3R_31075001 RAL-370 2530 chr3R 31139415 31139462 chr3R 31139655 31139702 12 240 4.0 3.0 3.5 2.7 287 chr3R 31139415 intron Gycbeta100B + chr3R 31139558 intron Gycbeta100B + chr3R 31139702 intron Gycbeta100B + chr3R_12_31135001 chr3R_31135001 RAL-370 2531 chr3R 31146727 31146783 chr3R 31146825 31146872 26 97 6.0 5.5 5.8 3.8 145 chr3R 31146727 intron Gycbeta100B + chr3R 31146800 intron Gycbeta100B + chr3R 31146872 intron Gycbeta100B + chr3R_26_31145001 chr3R_31145001 RAL-370 2532 chr3R 31167688 31167707 chr3R 31167786 31167806 4 98 0.0 5.5 2.8 1.1 118 chr3R 31167688 intron,intron Gycbeta100B +,stops - chr3R 31167747 intron,intron Gycbeta100B +,stops - chr3R 31167806 intron,intron Gycbeta100B +,stops - chr3R_4_31165001 chr3R_31165001 RAL-370 2533 chr3R 31265221 31265269 chr3R 31265319 31265370 24 97 5.0 5.0 5.0 4.0 149 chr3R 31265221 intergenic not near genes chr3R 31265296 intergenic ppk24 + chr3R 31265370 intergenic ppk24 + chr3R_24_31265001 chr3R_31265001 RAL-370 2534 chr3R 31279376 31279408 chr3R 31285563 31285597 diver 10 6193 6.0 5.5 5.8 1.5 6221 chr3R 31279376 intergenic not near genes chr3R 31282486 intergenic not near genes chr3R 31285597 intergenic not near genes chr3R_10_31280001 chr3R_31280001 RAL-370 2535 chr3R 31412689 31412741 chr3R 31412802 31412852 12 113 2.5 0.5 1.5 4.8 163 chr3R 31412689 intron Gprk2 + chr3R 31412770 intron Gprk2 + chr3R 31412852 intron Gprk2 + chr3R_12_31410001 chr3R_31410001 RAL-370 2536 chr3R 31413076 31413121 chr3R 31418296 31418318 copia 8 5216 1.0 0.0 0.5 5.3 5242 chr3R 31413076 intron Gprk2 + chr3R 31415697 intron Gprk2 + chr3R 31418318 intron Gprk2 + chr3R_8_31415001 chr3R_31415001 RAL-370 2537 chr3R 31426868 31426907 chr3R 31426975 31427018 11 111 7.0 6.0 6.5 1.5 150 chr3R 31426868 intron Gprk2 + chr3R 31426943 intron Gprk2 + chr3R 31427018 intron Gprk2 + chr3R_11_31425001 chr3R_31425001 RAL-370 2538 chr3R 31437958 31437994 chr3R 31438283 31438328 14 332 4.5 3.0 3.8 2.9 370 chr3R 31437958 intron Gprk2 + chr3R 31438143 intron Gprk2 + chr3R 31438328 intron Gprk2 + chr3R_14_31435001 chr3R_31435001 RAL-370 2539 chr3R 31448584 31448622 chr3R 31448679 31448715 8 90 6.0 4.5 5.2 1.3 131 chr3R 31448584 intron Gprk2 + chr3R 31448650 intron Gprk2 + chr3R 31448715 intron Gprk2 + chr3R_8_31445001 chr3R_31445001 RAL-370 2540 chr3R 31482177 31482206 chr3R 31482261 31482312 5 96 5.0 3.0 4.0 1.0 135 chr3R 31482177 intergenic not near genes chr3R 31482244 intergenic not near genes chr3R 31482312 intergenic not near genes chr3R_5_31480001 chr3R_31480001 RAL-370 2541 chr3R 31610095 31610142 chr3R 31610201 31610248 9 106 4.0 3.0 3.5 2.0 153 chr3R 31610095 intron CycG - chr3R 31610172 intron CycG - chr3R 31610248 intron CycG - chr3R_9_31610001 chr3R_31610001 RAL-370 2542 chr3R 31666094 31666141 chr3R 31667304 31667351 13 1207 3.0 3.5 3.2 3.1 1257 chr3R 31666094 intergenic not near genes chr3R 31666722 intergenic not near genes chr3R 31667351 intergenic not near genes chr3R_13_31665001 chr3R_31665001 RAL-370 2543 chr3R 31691534 31691560 chr3R 31696298 31696345 Doc 8 4780 2.0 5.5 3.8 1.7 4811 chr3R 31691534 intergenic not near genes chr3R 31693940 intergenic not near genes chr3R 31696345 intergenic not near genes chr3R_8_31690001 chr3R_31690001 RAL-370 2544 chr3R 31911662 31911709 chr3R 31911768 31911815 13 105 4.5 7.0 5.8 1.9 153 chr3R 31911662 intron heph - chr3R 31911738 intron heph - chr3R 31911815 intron heph - chr3R_13_31910001 chr3R_31910001 RAL-370 2545 chr3R 31931173 31931194 chr3R 31931276 31931297 4 102 6.5 4.5 5.5 0.6 124 chr3R 31931173 intron heph - chr3R 31931235 intron heph - chr3R 31931297 intron heph - chr3R_4_31930001 chr3R_31930001 RAL-370 2546 chr3R 31946000 31946055 chr3R 31946109 31946147 16 102 3.5 3.5 3.5 3.6 147 chr3R 31946000 intron heph - chr3R 31946074 intron heph - chr3R 31946147 intron heph - chr3R_16_31945001 chr3R_31945001 RAL-370 2547 chr3R 31954414 31954437 chr3R 31954514 31954540 4 104 6.5 5.5 6.0 0.6 126 chr3R 31954414 intron heph - chr3R 31954477 intron heph - chr3R 31954540 intron heph - chr3R_4_31950001 chr3R_31950001 RAL-370 2548 chr3R 31957962 31958010 chr3R 31958064 31958112 9 102 0.0 2.0 1.0 4.5 150 chr3R 31957962 intron heph - chr3R 31958037 intron heph - chr3R 31958112 intron heph - chr3R_9_31955001 chr3R_31955001 RAL-370 2549 chr3R 31978548 31978578 chr3R 31978758 31978762 4 202 5.0 5.5 5.2 0.6 214 chr3R 31978548 intron,intron heph -,CG2003 + chr3R 31978655 intron,intron heph -,CG2003 + chr3R 31978762 intron,intron heph -,CG2003 + chr3R_4_31975001 chr3R_31975001 RAL-370 2550 chr3R 31997972 31998019 chr3R 32005462 32005509 blood 18 7489 4.5 3.5 4.0 3.6 7537 chr3R 31997972 intron heph - chr3R 32001740 intron heph - chr3R 32005509 intron heph - chr3R_18_32000001 chr3R_32000001 RAL-370 2551 chr4 76480 76506 chr4 81941 81949 I-element 6 5459 9.0 6.0 7.5 0.7 5469 chr4 76480 intron pan + chr4 79214 intron pan + chr4 81949 intron pan + chr4_6_75001 chr4_75001 RAL-370 2552 chr4 319978 320016 chr4 328174 328211 Stalker2 4 8196 3.0 2.0 2.5 1.1 8233 chr4 319978 3` UTR CG32850 + chr4 324094 intron CG32850 + chr4 328211 3` UTR,3` UTR CG32850 +,PMCA - chr4_4_320001 chr4_320001 RAL-370 2553 chr4 671584 671629 chr4 680187 680231 Tirant 20 8602 4.0 5.0 4.5 3.6 8647 chr4 671584 intron CG11360 + chr4 675908 intron CG11360 + chr4 680231 intron CG11360 + chr4_20_675001 chr4_675001 RAL-370 2554 chr4 706642 706662 chr4 706811 706833 5 169 10.5 16.5 13.5 0.3 191 chr4 706642 intron ey + chr4 706738 intron ey + chr4 706833 intron ey + chr4_5_705001 chr4_705001 RAL-370 2555 chr4 872938 872975 chr4 873039 873084 11 105 5.0 5.5 5.2 1.8 146 chr4 872938 intron unc-13 - chr4 873011 intron unc-13 - chr4 873084 intron unc-13 - chr4_11_870001 chr4_870001 RAL-370 2556 chr4 959606 959653 chr4 959805 959852 9 198 2.5 3.5 3.0 2.2 246 chr4 959606 intergenic CR44030 +,CR45201 - chr4 959729 5` UTR CR44030 + chr4 959852 5` UTR CR44030 + chr4_9_955001 chr4_955001 RAL-370 2557 chr4 1043203 1043236 chr4 1043316 1043349 8 113 2.0 1.5 1.8 2.9 146 chr4 1043203 intron CaMKII - chr4 1043276 intron CaMKII - chr4 1043349 intron CaMKII - chr4_8_1040001 chr4_1040001 RAL-370 2558 chrX 264169 264210 chrX 264276 264319 11 107 3.5 3.5 3.5 2.4 150 chrX 264169 intron CR43906 + chrX 264244 intron CR43906 + chrX 264319 intron CR43906 + chrX_11_260001 chrX_260001 RAL-370 2559 chrX 295836 295882 chrX 303476 303522 412 12 7638 1.0 6.0 3.5 2.7 7686 chrX 295836 intron CG3777 + chrX 299679 intron CG3777 + chrX 303522 intron CG3777 + chrX_12_295001 chrX_295001 RAL-370 2560 chrX 318457 318490 chrX 323563 323596 flea 6 5106 2.0 5.5 3.8 1.2 5139 chrX 318457 intron,intron CG3777 +,CG32816 - chrX 321026 intron,intron CG3777 +,CG32816 - chrX 323596 intron,intron CG3777 +,CG32816 - chrX_6_320001 chrX_320001 RAL-370 2561 chrX 428399 428452 chrX 434602 434657 3S18 18 6204 4.5 0.5 2.5 5.1 6258 chrX 428399 intron CG32816 - chrX 431528 intron CG32816 - chrX 434657 intron CG32816 - chrX_18_430001 chrX_430001 RAL-370 2562 chrX 447254 447262 chrX 447429 447437 5 175 11.0 4.0 7.5 0.6 183 chrX 447254 intron CG32816 - chrX 447346 intron CG32816 - chrX 447437 intron CG32816 - chrX_5_445001 chrX_445001 RAL-370 2563 chrX 447270 447306 chrX 447427 447481 14 165 1.5 3.5 2.5 4.0 211 chrX 447270 intron CG32816 - chrX 447376 intron CG32816 - chrX 447481 intron CG32816 - chrX_14_445001 chrX_445001 RAL-370 2564 chrX 450344 450394 chrX 450442 450492 12 98 4.0 5.0 4.5 2.2 148 chrX 450344 intron CG32816 - chrX 450418 intron CG32816 - chrX 450492 intron CG32816 - chrX_12_450001 chrX_450001 RAL-370 2565 chrX 551408 551446 chrX 558990 559013 412 9 7573 7.0 3.0 5.0 1.5 7605 chrX 551408 intron Appl + chrX 555210 intron Appl + chrX 559013 intron Appl + chrX_9_555001 chrX_555001 RAL-370 2566 chrX 667630 667678 chrX 667731 667782 9 103 2.5 2.0 2.2 2.8 152 chrX 667630 intergenic not near genes chrX 667706 intergenic not near genes chrX 667782 intergenic not near genes chrX_9_665001 chrX_665001 RAL-370 2567 chrX 670252 670296 chrX 670348 670362 4 90 0.0 2.0 1.0 2.0 110 chrX 670252 intergenic not near genes chrX 670307 intergenic not near genes chrX 670362 intergenic not near genes chrX_4_670001 chrX_670001 RAL-370 2568 chrX 680831 680871 chrX 680920 680974 8 96 0.5 5.0 2.8 2.1 143 chrX 680831 intergenic not near genes chrX 680902 intergenic not near genes chrX 680974 intergenic not near genes chrX_8_680001 chrX_680001 RAL-370 2569 chrX 706774 706820 chrX 707166 707198 7 385 0.0 5.5 2.8 1.8 424 chrX 706774 intron sdk + chrX 706986 intron sdk + chrX 707198 intron sdk + chrX_7_705001 chrX_705001 RAL-370 2570 chrX 718337 718359 chrX 718437 718445 7 98 1.5 8.5 5.0 1.2 108 chrX 718337 intron sdk + chrX 718391 intron sdk + chrX 718445 intron sdk + chrX_7_715001 chrX_715001 RAL-370 2571 chrX 778106 778160 chrX 778216 778270 14 108 4.5 0.0 2.2 4.4 164 chrX 778106 intron fz3 + chrX 778188 intron fz3 + chrX 778270 intron fz3 + chrX_14_775001 chrX_775001 RAL-370 2572 chrX 806767 806811 chrX 806882 806889 8 109 2.0 3.5 2.8 2.1 122 chrX 806767 intron Sec22 + chrX 806828 intron Sec22 + chrX 806889 intron Sec22 + chrX_8_805001 chrX_805001 RAL-370 2573 chrX 827604 827635 chrX 835395 835467 roo 8 7807 5.5 0.0 2.8 2.1 7863 chrX 827604 intron CG43867 - chrX 831536 intron CG43867 - chrX 835467 intron CG43867 - chrX_8_830001 chrX_830001 RAL-370 2574 chrX 885815 885850 chrX 886046 886082 12 230 6.5 1.0 3.8 2.5 267 chrX 885815 intron CG43867 - chrX 885948 intron CG43867 - chrX 886082 intron CG43867 - chrX_12_885001 chrX_885001 RAL-370 2575 chrX 906684 906689 chrX 908492 908498 S-element 4 1808 9.5 7.0 8.2 0.4 1814 chrX 906684 intron CG43867 - chrX 907591 intron CG43867 - chrX 908498 intron CG43867 - chrX_4_905001 chrX_905001 RAL-370 2576 chrX 906694 906732 chrX 908491 908509 S-element 7 1801 5.5 6.5 6.0 1.0 1815 chrX 906694 intron CG43867 - chrX 907602 intron CG43867 - chrX 908509 intron CG43867 - chrX_7_905001 chrX_905001 RAL-370 2577 chrX 986144 986191 chrX 986246 986293 15 96 3.0 6.5 4.8 2.6 149 chrX 986144 intergenic not near genes chrX 986218 intergenic not near genes chrX 986293 intergenic not near genes chrX_15_985001 chrX_985001 RAL-370 2578 chrX 990200 990242 chrX 990301 990343 11 101 5.0 4.5 4.8 1.9 143 chrX 990200 intergenic CG18823 + chrX 990272 intergenic CG18823 + chrX 990343 intergenic CG18823 + chrX_11_990001 chrX_990001 RAL-370 2579 chrX 1153170 1153194 chrX 1153273 1153297 5 101 7.0 7.0 7.0 0.6 127 chrX 1153170 intergenic not near genes chrX 1153234 intergenic not near genes chrX 1153297 intergenic not near genes chrX_5_1150001 chrX_1150001 RAL-370 2580 chrX 1153202 1153215 chrX 1153271 1153316 6 94 2.0 7.0 4.5 1.1 114 chrX 1153202 intergenic not near genes chrX 1153259 intergenic not near genes chrX 1153316 intergenic not near genes chrX_6_1150001 chrX_1150001 RAL-370 2581 chrX 1163276 1163329 chrX 1163374 1163427 17 96 2.0 3.5 2.8 4.5 151 chrX 1163276 intergenic CG34320 - chrX 1163352 intergenic CG34320 - chrX 1163427 intergenic CG34320 - chrX_17_1160001 chrX_1160001 RAL-370 2582 chrX 1179962 1179972 chrX 1180064 1180074 4 102 3.0 9.5 6.2 0.6 112 chrX 1179962 intergenic CG11379 + chrX 1180018 intergenic CG11379 + chrX 1180074 intergenic CG11379 + chrX_4_1180001 chrX_1180001 RAL-370 2583 chrX 1185547 1185563 chrX 1185643 1185662 7 97 12.5 5.5 9.0 0.7 115 chrX 1185547 intron CG14626 + chrX 1185604 intron CG14626 + chrX 1185662 intron CG14626 + chrX_7_1185001 chrX_1185001 RAL-370 2584 chrX 1185570 1185593 chrX 1185637 1185680 8 93 7.5 5.0 6.2 1.1 110 chrX 1185570 intron CG14626 + chrX 1185625 intron CG14626 + chrX 1185680 intron CG14626 + chrX_8_1185001 chrX_1185001 RAL-370 2585 chrX 1335127 1335177 chrX 1335239 1335289 13 111 2.0 4.0 3.0 3.2 162 chrX 1335127 intron CG11409 - chrX 1335208 intron CG11409 - chrX 1335289 intron CG11409 - chrX_13_1335001 chrX_1335001 RAL-370 2586 chrX 1357759 1357779 chrX 1367949 1367969 Doc 7 10190 6.0 6.0 6.0 1.0 10210 chrX 1357759 intergenic png - chrX 1362864 intergenic not near genes chrX 1367969 intergenic not near genes chrX_7_1360001 chrX_1360001 RAL-370 2587 chrX 1357783 1357801 chrX 1367948 1367991 Doc 10 10187 3.0 5.5 4.2 1.9 10208 chrX 1357783 intergenic png - chrX 1362887 intergenic not near genes chrX 1367991 intergenic not near genes chrX_10_1360001 chrX_1360001 RAL-370 2588 chrX 1386370 1386414 chrX 1386475 1386519 13 101 1.5 2.0 1.8 4.6 149 chrX 1386370 intron CG32813 + chrX 1386444 intron CG32813 + chrX 1386519 intron CG32813 + chrX_13_1385001 chrX_1385001 RAL-370 2589 chrX 1428573 1428621 chrX 1428679 1428726 18 103 2.5 3.5 3.0 4.5 153 chrX 1428573 intron futsch + chrX 1428650 intron futsch + chrX 1428726 intron futsch + chrX_18_1425001 chrX_1425001 RAL-370 2590 chrX 1560635 1560659 chrX 1560747 1560771 4 112 5.0 0.5 2.8 1.1 136 chrX 1560635 intron Mur2B - chrX 1560703 intron Mur2B - chrX 1560771 intron Mur2B - chrX_4_1560001 chrX_1560001 RAL-370 2591 chrX 1627984 1627989 chrX 1635445 1635462 gtwin 5 7464 1.5 2.0 1.8 1.8 7478 chrX 1627984 intron,intron Mur2B -,br + chrX 1631723 intron,intron Mur2B -,br + chrX 1635462 intron,intron Mur2B -,br + chrX_5_1630001 chrX_1630001 RAL-370 2592 chrX 1651638 1651653 chrX 1651739 1651753 5 100 8.0 11.0 9.5 0.5 115 chrX 1651638 intron Mur2B - chrX 1651696 intron Mur2B - chrX 1651753 intron Mur2B - chrX_5_1650001 chrX_1650001 RAL-370 2593 chrX 1674839 1674857 chrX 1674935 1674950 7 95 6.5 3.0 4.8 1.2 111 chrX 1674839 3` UTR CG32809 - chrX 1674894 3` UTR CG32809 - chrX 1674950 3` UTR CG32809 - chrX_7_1670001 chrX_1670001 RAL-370 2594 chrX 1757617 1757626 chrX 1757703 1757727 5 91 5.0 3.0 4.0 1.0 110 chrX 1757617 intergenic not near genes chrX 1757672 intergenic not near genes chrX 1757727 intergenic not near genes chrX_5_1755001 chrX_1755001 RAL-370 2595 chrX 1987466 1987490 chrX 1987590 1987614 10 123 8.0 2.0 5.0 1.7 148 chrX 1987466 intron Hr4 + chrX 1987540 intron Hr4 + chrX 1987614 intron Hr4 + chrX_10_1985001 chrX_1985001 RAL-370 2596 chrX 1987497 1987508 chrX 1987589 1987632 8 116 5.5 2.0 3.8 1.7 135 chrX 1987497 intron Hr4 + chrX 1987564 intron Hr4 + chrX 1987632 intron Hr4 + chrX_8_1985001 chrX_1985001 RAL-370 2597 chrX 2095916 2095949 chrX 2096012 2096045 10 96 5.5 0.0 2.8 2.6 129 chrX 2095916 intron csw + chrX 2095980 intron csw + chrX 2096045 intron csw + chrX_10_2095001 chrX_2095001 RAL-370 2598 chrX 2146639 2146652 chrX 2146751 2146764 7 112 11.0 6.0 8.5 0.7 125 chrX 2146639 intron Pgd + chrX 2146702 intron Pgd + chrX 2146764 intron Pgd + chrX_7_2145001 chrX_2145001 RAL-370 2599 chrX 2284179 2284227 chrX 2284277 2284316 8 92 1.0 1.5 1.2 3.6 137 chrX 2284179 intron CG2865 - chrX 2284248 intron CG2865 - chrX 2284316 intron CG2865 - chrX_8_2280001 chrX_2280001 RAL-370 2600 chrX 2399815 2399866 chrX 2408188 2408197 roo 4 8349 3.0 0.0 1.5 1.6 8382 chrX 2399815 intergenic not near genes chrX 2404006 intergenic not near genes chrX 2408197 intergenic not near genes chrX_4_2400001 chrX_2400001 RAL-370 2601 chrX 2429659 2429667 chrX 2429760 2429768 5 100 0.0 7.5 3.8 1.0 109 chrX 2429659 intergenic not near genes chrX 2429714 intergenic not near genes chrX 2429768 intergenic not near genes chrX_5_2425001 chrX_2425001 RAL-370 2602 chrX 2578798 2578826 chrX 2578910 2578915 7 106 5.5 6.0 5.8 1.0 117 chrX 2578798 intergenic Pdfr +,Vha36-3 - chrX 2578856 intergenic Pdfr +,Vha36-3 - chrX 2578915 intergenic Vha36-3 -,Pdfr + chrX_7_2575001 chrX_2575001 RAL-370 2603 chrX 2664367 2664418 chrX 2665533 2665582 1360 12 1166 3.5 3.0 3.2 2.9 1215 chrX 2664367 intron sgg + chrX 2664974 intron sgg + chrX 2665582 intron sgg + chrX_12_2660001 chrX_2660001 RAL-370 2604 chrX 2844881 2844925 chrX 2852311 2852355 mdg1 11 7427 6.0 2.5 4.2 2.1 7474 chrX 2844881 intron kirre + chrX 2848618 intron kirre + chrX 2852355 intron kirre + chrX_11_2845001 chrX_2845001 RAL-370 2605 chrX 2877023 2877069 chrX 2877144 2877186 13 121 3.5 3.5 3.5 2.9 163 chrX 2877023 intron kirre + chrX 2877104 intron kirre + chrX 2877186 intron kirre + chrX_13_2875001 chrX_2875001 RAL-370 2606 chrX 2972023 2972052 chrX 2972172 2972211 6 151 4.5 7.0 5.8 0.9 188 chrX 2972023 intron,intron kirre +,rst - chrX 2972117 intron,intron kirre +,rst - chrX 2972211 intron,intron kirre +,rst - chrX_6_2970001 chrX_2970001 RAL-370 2607 chrX 3058001 3058036 chrX 3058262 3058297 pogo 6 261 6.0 2.5 4.2 1.2 296 chrX 3058001 intron kirre + chrX 3058149 intron kirre + chrX 3058297 intron kirre + chrX_6_3055001 chrX_3055001 RAL-370 2608 chrX 3075631 3075641 chrX 3080957 3080966 Transpac 5 5325 8.5 9.0 8.8 0.5 5335 chrX 3075631 intron kirre + chrX 3078298 intron kirre + chrX 3080966 intron kirre + chrX_5_3075001 chrX_3075001 RAL-370 2609 chrX 3109426 3109466 chrX 3109523 3109559 12 96 3.0 2.5 2.8 3.2 133 chrX 3109426 intron kirre + chrX 3109492 intron kirre + chrX 3109559 intron kirre + chrX_12_3105001 chrX_3105001 RAL-370 2610 chrX 3111054 3111061 chrX 3111154 3111161 4 99 8.0 0.0 4.0 0.8 107 chrX 3111054 intron kirre + chrX 3111108 intron kirre + chrX 3111161 intron kirre + chrX_4_3110001 chrX_3110001 RAL-370 2611 chrX 3155703 3155750 chrX 3155812 3155852 10 108 3.5 1.0 2.2 3.1 149 chrX 3155703 intron N + chrX 3155778 intron N + chrX 3155852 intron N + chrX_10_3155001 chrX_3155001 RAL-370 2612 chrX 3178206 3178257 chrX 3178308 3178360 10 103 2.0 2.0 2.0 3.3 154 chrX 3178206 intron dnc + chrX 3178283 intron dnc + chrX 3178360 intron dnc + chrX_10_3175001 chrX_3175001 RAL-370 2613 chrX 3203458 3203491 chrX 3203677 3203681 11 216 2.0 5.5 3.8 2.3 223 chrX 3203458 intron dnc + chrX 3203570 intron dnc + chrX 3203681 intron dnc + chrX_11_3200001 chrX_3200001 RAL-370 2614 chrX 3208125 3208168 chrX 3208228 3208270 10 102 4.5 3.0 3.8 2.1 145 chrX 3208125 intron dnc + chrX 3208198 intron dnc + chrX 3208270 intron dnc + chrX_10_3205001 chrX_3205001 RAL-370 2615 chrX 3218488 3218538 chrX 3227657 3227706 roo 7 9168 1.0 2.5 1.8 2.5 9218 chrX 3218488 intron dnc + chrX 3223097 intron dnc + chrX 3227706 intron dnc + chrX_7_3220001 chrX_3220001 RAL-370 2616 chrX 3306324 3306369 chrX 3306425 3306470 5 101 2.0 2.5 2.2 1.6 146 chrX 3306324 intron dnc + chrX 3306397 intron dnc + chrX 3306470 intron dnc + chrX_5_3305001 chrX_3305001 RAL-370 2617 chrX 3321208 3321239 chrX 3321321 3321353 8 114 1.5 4.0 2.8 2.1 145 chrX 3321208 exon,intron dnc +,CR44886 - chrX 3321280 intron,intron dnc +,CR44886 - chrX 3321353 intron,intron dnc +,CR44886 - chrX_8_3320001 chrX_3320001 RAL-370 2618 chrX 3398123 3398372 chrX 3398224 3398470 11 99 1.0 9.0 5.0 1.8 347 chrX 3398123 intron,intron CR44999 +,CG12535 - chrX 3398296 intron,intron CR44999 +,CG12535 - chrX 3398470 intron,intron CR44999 +,CG12535 - chrX_11_3395001 chrX_3395001 RAL-370 2619 chrX 3415017 3415039 chrX 3421222 3421243 3S18 6 6205 4.0 6.0 5.0 1.0 6226 chrX 3415017 intron,intron CR44999 +,CG12535 - chrX 3418130 intron,intron CR44999 +,CG12535 - chrX 3421243 intron,intron CR44999 +,CG12535 - chrX_6_3415001 chrX_3415001 RAL-370 2620 chrX 3493071 3493125 chrX 3502250 3502267 roo 8 9174 1.5 2.0 1.8 2.9 9196 chrX 3493071 intron,intron CR44999 +,Gas8 - chrX 3497669 intron,intron CR44999 +,Gas8 - chrX 3502267 intron,intron CR44999 +,Gas8 - chrX_8_3495001 chrX_3495001 RAL-370 2621 chrX 3513739 3513784 chrX 3513842 3513887 10 102 5.0 2.5 3.8 2.1 148 chrX 3513739 intron,intron CR44999 +,CG32791 - chrX 3513813 intron,intron CR44999 +,CG32791 - chrX 3513887 intron,intron CR44999 +,CG32791 - chrX_10_3510001 chrX_3510001 RAL-370 2622 chrX 3553494 3553516 chrX 3553597 3553597 6 99 6.5 4.5 5.5 0.9 103 chrX 3553494 intron CG32791 - chrX 3553546 intron CG32791 - chrX 3553597 intron CG32791 - chrX_6_3550001 chrX_3550001 RAL-370 2623 chrX 3597533 3597581 chrX 3619720 3619769 roo 14 22185 4.5 6.0 5.2 2.3 22236 chrX 3597533 intron AstA-R1 + chrX 3608651 intron AstA-R1 + chrX 3619769 intron AstA-R1 + chrX_14_3605001 chrX_3605001 RAL-370 2624 chrX 3626125 3626144 chrX 3626228 3626249 8 104 0.0 0.0 0.0 8.0 124 chrX 3626125 intron AstA-R1 + chrX 3626187 intron AstA-R1 + chrX 3626249 intron AstA-R1 + chrX_8_3625001 chrX_3625001 RAL-370 2625 chrX 3726749 3726791 chrX 3730166 3730188 NOF 11 3414 4.0 3.5 3.8 2.3 3439 chrX 3726749 intron tlk + chrX 3728468 intron tlk + chrX 3730188 intron tlk + chrX_11_3725001 chrX_3725001 RAL-370 2626 chrX 3842343 3842351 chrX 3842581 3842589 pogo 5 238 2.5 5.5 4.0 1.0 246 chrX 3842343 intron ec + chrX 3842466 intron ec + chrX 3842589 intron ec + chrX_5_3840001 chrX_3840001 RAL-370 2627 chrX 3866087 3866131 chrX 3866185 3866229 14 97 3.0 1.0 2.0 4.7 142 chrX 3866087 intron yin - chrX 3866158 intron yin - chrX 3866229 intron yin - chrX_14_3865001 chrX_3865001 RAL-370 2628 chrX 3874724 3874774 chrX 3874825 3874851 14 96 2.5 3.5 3.0 3.5 127 chrX 3874724 intron CG2930 + chrX 3874788 intron CG2930 + chrX 3874851 intron CG2930 + chrX_14_3870001 chrX_3870001 RAL-370 2629 chrX 3986844 3986893 chrX 3994494 3994507 412 13 7648 5.5 4.5 5.0 2.2 7663 chrX 3986844 intergenic not near genes chrX 3990676 intergenic not near genes chrX 3994507 intergenic not near genes chrX_13_3990001 chrX_3990001 RAL-370 2630 chrX 4021162 4021191 chrX 4021270 4021295 8 112 0.5 2.0 1.2 3.6 133 chrX 4021162 intergenic not near genes chrX 4021228 intergenic not near genes chrX 4021295 intergenic not near genes chrX_8_4020001 chrX_4020001 RAL-370 2631 chrX 4157880 4157914 chrX 4164953 4164986 297 9 7072 4.0 3.5 3.8 1.9 7106 chrX 4157880 intron Fas2 - chrX 4161433 intron Fas2 - chrX 4164986 intron Fas2 - chrX_9_4160001 chrX_4160001 RAL-370 2632 chrX 4229969 4229984 chrX 4230104 4230120 5 134 2.5 2.5 2.5 1.4 151 chrX 4229969 intergenic not near genes chrX 4230044 intergenic not near genes chrX 4230120 intergenic not near genes chrX_5_4230001 chrX_4230001 RAL-370 2633 chrX 4247956 4247979 chrX 4248301 4248330 7 350 1.5 1.5 1.5 2.8 374 chrX 4247956 intergenic CG43134 +,CG43135 + chrX 4248143 intergenic CG43135 +,CG43134 + chrX 4248330 intergenic CG43135 + chrX_7_4245001 chrX_4245001 RAL-370 2634 chrX 4396953 4397010 chrX 4397058 4397106 17 102 3.5 1.5 2.5 4.9 153 chrX 4396953 intron CR32773 - chrX 4397030 intron CR32773 - chrX 4397106 intron CR32773 - chrX_17_4395001 chrX_4395001 RAL-370 2635 chrX 4574884 4574930 chrX 4574995 4575040 8 110 0.5 1.0 0.8 4.4 156 chrX 4574884 intron CR32773 - chrX 4574962 intron CR32773 - chrX 4575040 intron CR32773 - chrX_8_4570001 chrX_4570001 RAL-370 2636 chrX 4575594 4575641 chrX 4575703 4575750 14 109 4.0 6.0 5.0 2.3 156 chrX 4575594 intron CR32773 - chrX 4575672 intron CR32773 - chrX 4575750 intron CR32773 - chrX_14_4575001 chrX_4575001 RAL-370 2637 chrX 4700390 4700424 chrX 4700753 4700787 jockey 8 360 4.0 6.5 5.2 1.3 397 chrX 4700390 3` UTR ctp + chrX 4700588 3` UTR ctp + chrX 4700787 3` UTR ctp + chrX_8_4700001 chrX_4700001 RAL-370 2638 chrX 4731799 4731817 chrX 4736911 4736914 jockey 5 5109 4.5 4.0 4.2 1.0 5115 chrX 4731799 intergenic not near genes chrX 4734356 intergenic not near genes chrX 4736914 intergenic not near genes chrX_5_4730001 chrX_4730001 RAL-370 2639 chrX 4763234 4763280 chrX 4763742 4763786 Stalker4 11 507 4.0 3.0 3.5 2.4 552 chrX 4763234 intergenic not near genes chrX 4763510 intergenic not near genes chrX 4763786 intergenic not near genes chrX_11_4760001 chrX_4760001 RAL-370 2640 chrX 4792373 4792399 chrX 4792822 4792851 jockey 5 451 4.5 7.0 5.8 0.7 478 chrX 4792373 intergenic not near genes chrX 4792612 intergenic not near genes chrX 4792851 intergenic not near genes chrX_5_4790001 chrX_4790001 RAL-370 2641 chrX 4827946 4827998 chrX 4835337 4835389 Stalker4 19 7385 3.0 2.0 2.5 5.4 7443 chrX 4827946 intergenic not near genes chrX 4831668 intergenic not near genes chrX 4835389 intergenic not near genes chrX_19_4830001 chrX_4830001 RAL-370 2642 chrX 4878859 4878894 chrX 4878988 4879023 6 129 3.0 1.0 2.0 2.0 164 chrX 4878859 intron CG42594 + chrX 4878941 intron CG42594 + chrX 4879023 intron CG42594 + chrX_6_4875001 chrX_4875001 RAL-370 2643 chrX 4931325 4931379 chrX 4931439 4931491 13 111 33.5 27.5 30.5 0.4 166 chrX 4931325 intron CG44774 - chrX 4931408 intron CG44774 - chrX 4931491 intron CG44774 - chrX_13_4930001 chrX_4930001 RAL-370 2644 chrX 4990028 4990059 chrX 4997262 4997293 roo 10 7232 2.5 1.5 2.0 3.3 7265 chrX 4990028 intron CR44833 - chrX 4993660 intron CR44833 - chrX 4997293 intron CR44833 - chrX_10_4990001 chrX_4990001 RAL-370 2645 chrX 5055843 5055865 chrX 5055995 5056017 10 152 3.0 1.5 2.2 3.1 174 chrX 5055843 intron,intron CR44833 -,ovo + chrX 5055930 intron,intron CR44833 -,ovo + chrX 5056017 intron,intron CR44833 -,ovo + chrX_10_5055001 chrX_5055001 RAL-370 2646 chrX 5122798 5122844 chrX 5123047 5123073 4 244 4.5 0.5 2.5 1.1 275 chrX 5122798 intron,intron CG15465 +,rg + chrX 5122936 intron,intron CG15465 +,rg + chrX 5123073 intron,intron CG15465 +,rg + chrX_4_5120001 chrX_5120001 RAL-370 2647 chrX 5140695 5140748 chrX 5140843 5140896 9 147 2.0 1.0 1.5 3.6 201 chrX 5140695 intron,intron CG15465 +,rg + chrX 5140796 intron,intron CG15465 +,rg + chrX 5140896 intron,intron CG15465 +,rg + chrX_9_5140001 chrX_5140001 RAL-370 2648 chrX 5159704 5159742 chrX 5159819 5159856 6 114 6.0 2.0 4.0 1.2 152 chrX 5159704 intron,intron CG15465 +,rg + chrX 5159780 intron,intron CG15465 +,rg + chrX 5159856 intron,intron CG15465 +,rg + chrX_6_5155001 chrX_5155001 RAL-370 2649 chrX 5291490 5291512 chrX 5291593 5291615 8 101 7.5 2.5 5.0 1.3 125 chrX 5291490 intergenic not near genes chrX 5291552 intergenic not near genes chrX 5291615 intergenic not near genes chrX_8_5290001 chrX_5290001 RAL-370 2650 chrX 5338690 5338722 chrX 5339963 5339978 jockey 8 1270 5.0 1.0 3.0 2.0 1288 chrX 5338690 intergenic not near genes chrX 5339334 intergenic not near genes chrX 5339978 intergenic SK + chrX_8_5335001 chrX_5335001 RAL-370 2651 chrX 5350283 5350312 chrX 5350412 5350440 8 124 1.5 6.5 4.0 1.6 157 chrX 5350283 intron SK + chrX 5350362 intron SK + chrX 5350440 intron SK + chrX_8_5350001 chrX_5350001 RAL-370 2652 chrX 5473573 5473615 chrX 5473669 5473689 11 89 5.0 5.0 5.0 1.8 116 chrX 5473573 intron SPR + chrX 5473631 intron SPR + chrX 5473689 intron SPR + chrX_11_5470001 chrX_5470001 RAL-370 2653 chrX 5501470 5501504 chrX 5501579 5501614 6 110 2.0 2.5 2.2 1.9 144 chrX 5501470 intergenic CG4151 +,CG32762 - chrX 5501542 5` UTR CG4151 + chrX 5501614 5` UTR CG4151 + chrX_6_5500001 chrX_5500001 RAL-370 2654 chrX 5518713 5518735 chrX 5518817 5518840 6 104 7.5 5.0 6.2 0.8 127 chrX 5518713 3` UTR CG12730 + chrX 5518776 intergenic CG12730 + chrX 5518840 intergenic CG12730 + chrX_6_5515001 chrX_5515001 RAL-370 2655 chrX 5518737 5518762 chrX 5518815 5518867 7 101 4.5 4.5 4.5 1.3 130 chrX 5518737 3` UTR CG12730 + chrX 5518802 intergenic CG12730 + chrX 5518867 intergenic CG12730 + chrX_7_5515001 chrX_5515001 RAL-370 2656 chrX 5524826 5524859 chrX 5528709 5528742 412 10 3883 4.5 0.5 2.5 2.9 3916 chrX 5524826 intergenic snoRNA:Psi28S-3342 - chrX 5526784 intergenic not near genes chrX 5528742 intergenic Vsx2 - chrX_10_5525001 chrX_5525001 RAL-370 2657 chrX 5725012 5725054 chrX 5725135 5725177 13 120 4.0 2.5 3.2 3.1 165 chrX 5725012 intron CG32758 - chrX 5725094 intron CG32758 - chrX 5725177 intron CG32758 - chrX_13_5725001 chrX_5725001 RAL-370 2658 chrX 5823963 5823976 chrX 5824140 5824187 8 182 13.0 18.5 15.8 0.5 224 chrX 5823963 intron CG15765 + chrX 5824075 intron CG15765 + chrX 5824187 intron CG15765 + chrX_8_5820001 chrX_5820001 RAL-370 2659 chrX 5883790 5883836 chrX 5884051 5884096 pogo 8 261 3.5 3.0 3.2 1.9 306 chrX 5883790 intron CR45668 - chrX 5883943 intron CR45668 - chrX 5884096 intron CR45668 - chrX_8_5880001 chrX_5880001 RAL-370 2660 chrX 5884147 5884191 chrX 5884408 5884452 pogo 9 258 5.0 3.5 4.2 1.7 305 chrX 5884147 intron CR45668 - chrX 5884300 intron CR45668 - chrX 5884452 intron CR45668 - chrX_9_5880001 chrX_5880001 RAL-370 2661 chrX 6097795 6097844 chrX 6098070 6098118 16 271 1.0 3.0 2.0 5.3 323 chrX 6097795 intron Nep1 + chrX 6097956 intron Nep1 + chrX 6098118 intron Nep1 + chrX_16_6095001 chrX_6095001 RAL-370 2662 chrX 6118676 6118733 chrX 6118778 6118833 16 100 2.0 2.5 2.2 5.0 157 chrX 6118676 intron Ca-alpha1T - chrX 6118754 intron Ca-alpha1T - chrX 6118833 intron Ca-alpha1T - chrX_16_6115001 chrX_6115001 RAL-370 2663 chrX 6168080 6168125 chrX 6168185 6168218 14 102 5.0 3.5 4.2 2.7 138 chrX 6168080 intron Ca-alpha1T - chrX 6168149 intron Ca-alpha1T - chrX 6168218 intron Ca-alpha1T - chrX_14_6165001 chrX_6165001 RAL-370 2664 chrX 6171572 6171602 chrX 6179025 6179055 Quasimodo 5 7452 5.5 5.0 5.2 0.8 7483 chrX 6171572 intron Ca-alpha1T - chrX 6175314 intron Ca-alpha1T - chrX 6179055 intron Ca-alpha1T - chrX_5_6175001 chrX_6175001 RAL-370 2665 chrX 6205221 6205269 chrX 6205325 6205373 14 103 4.0 4.5 4.2 2.7 152 chrX 6205221 intergenic not near genes chrX 6205297 intergenic not near genes chrX 6205373 intergenic not near genes chrX_14_6205001 chrX_6205001 RAL-370 2666 chrX 6215507 6215525 chrX 6215608 6215611 6 98 7.5 5.5 6.5 0.8 104 chrX 6215507 intergenic not near genes chrX 6215559 intergenic not near genes chrX 6215611 intergenic not near genes chrX_6_6215001 chrX_6215001 RAL-370 2667 chrX 6301657 6301690 chrX 6301763 6301798 9 104 7.5 6.5 7.0 1.1 141 chrX 6301657 intergenic CG12219 - chrX 6301728 intergenic CG12219 - chrX 6301798 intergenic not near genes chrX_9_6300001 chrX_6300001 RAL-370 2668 chrX 6301691 6301705 chrX 6301762 6301813 7 97 5.5 6.0 5.8 1.0 122 chrX 6301691 intergenic CG12219 - chrX 6301752 intergenic CG12219 - chrX 6301813 intergenic not near genes chrX_7_6300001 chrX_6300001 RAL-370 2669 chrX 6335217 6335232 chrX 6337729 6337762 Tirant 5 2524 0.0 4.5 2.2 1.6 2545 chrX 6335217 intergenic not near genes chrX 6336490 intergenic not near genes chrX 6337762 5` UTR CG3842 + chrX_5_6335001 chrX_6335001 RAL-370 2670 chrX 6388654 6388692 chrX 6388750 6388788 13 95 2.5 8.5 5.5 2.0 134 chrX 6388654 intergenic not near genes chrX 6388721 intergenic not near genes chrX 6388788 intergenic not near genes chrX_13_6385001 chrX_6385001 RAL-370 2671 chrX 6392852 6392893 chrX 6397637 6397678 Doc 10 4785 3.5 3.5 3.5 2.2 4826 chrX 6392852 intergenic not near genes chrX 6395265 intergenic not near genes chrX 6397678 intergenic not near genes chrX_10_6395001 chrX_6395001 RAL-370 2672 chrX 6562810 6562846 chrX 6571300 6571306 Tirant 10 8491 7.0 2.5 4.8 1.7 8496 chrX 6562810 intron CG34417 + chrX 6567058 intron CG34417 + chrX 6571306 intron CG34417 + chrX_10_6565001 chrX_6565001 RAL-370 2673 chrX 6591835 6591874 chrX 6591940 6591957 5 100 2.5 0.0 1.2 2.3 122 chrX 6591835 intron Pat1 + chrX 6591896 intron Pat1 + chrX 6591957 intron Pat1 + chrX_5_6590001 chrX_6590001 RAL-370 2674 chrX 6618445 6618475 chrX 6618543 6618557 10 94 8.0 5.0 6.5 1.3 112 chrX 6618445 intron pigs + chrX 6618501 intron pigs + chrX 6618557 intron pigs + chrX_10_6615001 chrX_6615001 RAL-370 2675 chrX 6629767 6629790 chrX 6629874 6629896 7 107 4.0 5.0 4.5 1.3 129 chrX 6629767 intron pigs + chrX 6629832 intron pigs + chrX 6629896 intron pigs + chrX_7_6625001 chrX_6625001 RAL-370 2676 chrX 6792063 6792085 chrX 6792174 6792196 4 111 1.5 3.0 2.2 1.2 133 chrX 6792063 intron C3G - chrX 6792130 intron C3G - chrX 6792196 intron C3G - chrX_4_6790001 chrX_6790001 RAL-370 2677 chrX 6814266 6814286 chrX 6814364 6814384 5 98 3.5 1.5 2.5 1.4 118 chrX 6814266 intron iav + chrX 6814325 intron iav + chrX 6814384 intron iav + chrX_5_6810001 chrX_6810001 RAL-370 2678 chrX 6859543 6859567 chrX 6859976 6859994 6 429 5.5 0.0 2.8 1.6 451 chrX 6859543 intron CG14434 - chrX 6859768 intron CG14434 - chrX 6859994 intron CG14434 - chrX_6_6855001 chrX_6855001 RAL-370 2679 chrX 6871175 6871215 chrX 6871285 6871322 8 110 1.0 2.0 1.5 3.2 147 chrX 6871175 intron CG43736 + chrX 6871248 intron CG43736 + chrX 6871322 intron CG43736 + chrX_8_6870001 chrX_6870001 RAL-370 2680 chrX 6897668 6897711 chrX 6897798 6897825 15 126 2.5 3.5 3.0 3.8 157 chrX 6897668 intergenic not near genes chrX 6897746 intergenic not near genes chrX 6897825 intergenic not near genes chrX_15_6895001 chrX_6895001 RAL-370 2681 chrX 6901369 6901386 chrX 6901464 6901482 4 96 3.0 4.5 3.8 0.8 113 chrX 6901369 intergenic not near genes chrX 6901426 intergenic not near genes chrX 6901482 intergenic not near genes chrX_4_6900001 chrX_6900001 RAL-370 2682 chrX 6981398 6981449 chrX 6981503 6981554 14 104 5.0 3.5 4.2 2.7 156 chrX 6981398 intron ogre - chrX 6981476 intron ogre - chrX 6981554 intron ogre - chrX_14_6980001 chrX_6980001 RAL-370 2683 chrX 6987316 6987327 chrX 6987433 6987447 4 116 8.5 2.5 5.5 0.6 131 chrX 6987316 intron ogre - chrX 6987382 intron ogre - chrX 6987447 intron ogre - chrX_4_6985001 chrX_6985001 RAL-370 2684 chrX 6987330 6987360 chrX 6987431 6987480 7 117 4.0 2.0 3.0 1.8 150 chrX 6987330 intron ogre - chrX 6987405 intron ogre - chrX 6987480 intron ogre - chrX_7_6985001 chrX_6985001 RAL-370 2685 chrX 6989487 6989525 chrX 6989594 6989630 9 106 2.0 4.5 3.2 2.1 143 chrX 6989487 intron ogre - chrX 6989558 intron ogre - chrX 6989630 intron ogre - chrX_9_6985001 chrX_6985001 RAL-370 2686 chrX 7023584 7023629 chrX 7030992 7031039 Tabor 16 7407 10.5 4.5 7.5 1.9 7455 chrX 7023584 intron CG12541 - chrX 7027312 intron CG12541 - chrX 7031039 intron CG12541 - chrX_16_7025001 chrX_7025001 RAL-370 2687 chrX 7125236 7125269 chrX 7134415 7134448 roo 11 9178 2.0 4.0 3.0 2.8 9212 chrX 7125236 intergenic not near genes chrX 7129842 intergenic not near genes chrX 7134448 intergenic not near genes chrX_11_7125001 chrX_7125001 RAL-370 2688 chrX 7345200 7345215 chrX 7345290 7345327 4 106 7.0 2.5 4.8 0.7 127 chrX 7345200 intron,intron CR44357 -,CG1677 - chrX 7345264 intron,intron CR44357 -,CG1677 - chrX 7345327 intron,intron CR44357 -,CG1677 - chrX_4_7345001 chrX_7345001 RAL-370 2689 chrX 7552227 7552268 chrX 7552324 7552362 7 95 4.0 0.0 2.0 2.3 135 chrX 7552227 intergenic not near genes chrX 7552294 intergenic not near genes chrX 7552362 intergenic not near genes chrX_7_7550001 chrX_7550001 RAL-370 2690 chrX 7702885 7702924 chrX 7703343 7703383 jockey 11 458 5.5 4.5 5.0 1.8 498 chrX 7702885 intron CHES-1-like - chrX 7703134 intron CHES-1-like - chrX 7703383 intron CHES-1-like - chrX_11_7700001 chrX_7700001 RAL-370 2691 chrX 7737111 7737133 chrX 7737243 7737246 8 128 2.0 1.5 1.8 2.9 135 chrX 7737111 5` UTR Tom40 + chrX 7737178 intron Tom40 + chrX 7737246 intron Tom40 + chrX_8_7735001 chrX_7735001 RAL-370 2692 chrX 7845713 7845756 chrX 7847224 7847267 hopper2 7 1508 3.0 8.5 5.8 1.0 1554 chrX 7845713 intergenic not near genes chrX 7846490 intergenic not near genes chrX 7847267 intergenic not near genes chrX_7_7845001 chrX_7845001 RAL-370 2693 chrX 7960864 7960889 chrX 7960973 7960998 6 109 4.0 4.0 4.0 1.2 134 chrX 7960864 intron,5` UTR sws -,CR45620 + chrX 7960931 intron sws - chrX 7960998 intron sws - chrX_6_7960001 chrX_7960001 RAL-370 2694 chrX 8031429 8031445 chrX 8035735 8035768 Juan 4 4322 3.5 1.0 2.2 1.2 4339 chrX 8031429 intergenic not near genes chrX 8033598 intergenic not near genes chrX 8035768 3` UTR CG2233 - chrX_4_8030001 chrX_8030001 RAL-370 2695 chrX 8066558 8066599 chrX 8066660 8066708 6 106 0.0 0.5 0.2 5.0 150 chrX 8066558 intron mys + chrX 8066633 intron mys + chrX 8066708 intron mys + chrX_6_8065001 chrX_8065001 RAL-370 2696 chrX 8085557 8085603 chrX 8085661 8085708 21 104 6.0 2.0 4.0 4.2 151 chrX 8085557 intron,5` UTR CG2256 -,CR45535 + chrX 8085632 intron,5` UTR CG2256 -,CR45535 + chrX 8085708 intron,5` UTR CG2256 -,CR45535 + chrX_21_8085001 chrX_8085001 RAL-370 2697 chrX 8364831 8364866 chrX 8365248 8365300 BS 6 425 5.5 0.0 2.8 1.6 469 chrX 8364831 intron nAChRalpha3 - chrX 8365066 intron nAChRalpha3 - chrX 8365300 intron nAChRalpha3 - chrX_6_8365001 chrX_8365001 RAL-370 2698 chrX 8371137 8371178 chrX 8371315 8371319 4 167 1.5 0.0 0.8 2.2 182 chrX 8371137 intergenic not near genes chrX 8371228 intergenic not near genes chrX 8371319 intergenic not near genes chrX_4_8370001 chrX_8370001 RAL-370 2699 chrX 8450993 8451011 chrX 8451092 8451110 6 99 4.0 7.0 5.5 0.9 117 chrX 8450993 intron org-1 - chrX 8451052 intron org-1 - chrX 8451110 exon org-1 - chrX_6_8450001 chrX_8450001 RAL-370 2700 chrX 8506511 8506557 chrX 8506739 8506767 12 226 2.0 2.5 2.2 3.8 256 chrX 8506511 intron CG33181 + chrX 8506639 intron CG33181 + chrX 8506767 intron CG33181 + chrX_12_8505001 chrX_8505001 RAL-370 2701 chrX 8509104 8509119 chrX 8509201 8509216 6 97 3.5 3.5 3.5 1.3 112 chrX 8509104 intron CG33181 + chrX 8509160 intron CG33181 + chrX 8509216 intron CG33181 + chrX_6_8505001 chrX_8505001 RAL-370 2702 chrX 8710068 8710105 chrX 8710301 8710338 7 233 0.0 2.5 1.2 3.2 270 chrX 8710068 intron Hexo2 + chrX 8710203 intron Hexo2 + chrX 8710338 intron Hexo2 + chrX_7_8710001 chrX_8710001 RAL-370 2703 chrX 8772229 8772249 chrX 8772328 8772348 5 97 5.5 4.5 5.0 0.8 119 chrX 8772229 intron Lim1 - chrX 8772288 intron Lim1 - chrX 8772348 intron Lim1 - chrX_5_8770001 chrX_8770001 RAL-370 2704 chrX 8812203 8812222 chrX 8812701 8812720 4 498 4.0 2.0 3.0 1.0 517 chrX 8812203 intergenic not near genes chrX 8812462 intergenic not near genes chrX 8812720 intergenic not near genes chrX_4_8810001 chrX_8810001 RAL-370 2705 chrX 8843804 8843824 chrX 8843907 8843928 5 101 1.5 0.0 0.8 2.8 124 chrX 8843804 intron CG12075 + chrX 8843866 intron CG12075 + chrX 8843928 intron CG12075 + chrX_5_8840001 chrX_8840001 RAL-370 2706 chrX 8885669 8885695 chrX 8885786 8885815 6 119 3.0 6.5 4.8 1.0 146 chrX 8885669 intron Moe - chrX 8885742 intron Moe - chrX 8885815 intron Moe - chrX_6_8885001 chrX_8885001 RAL-370 2707 chrX 8922313 8922349 chrX 8922767 8922799 jockey 7 449 4.5 4.0 4.2 1.3 486 chrX 8922313 intron rdgA + chrX 8922556 intron rdgA + chrX 8922799 intron rdgA + chrX_7_8920001 chrX_8920001 RAL-370 2708 chrX 8922351 8922359 chrX 8922766 8922813 jockey 4 440 2.5 4.0 3.2 1.0 462 chrX 8922351 intron rdgA + chrX 8922582 intron rdgA + chrX 8922813 intron rdgA + chrX_4_8920001 chrX_8920001 RAL-370 2709 chrX 8944895 8944927 chrX 8945142 8945174 11 246 4.0 5.5 4.8 1.9 279 chrX 8944895 intron rdgA + chrX 8945034 intron rdgA + chrX 8945174 intron rdgA + chrX_11_8945001 chrX_8945001 RAL-370 2710 chrX 8948752 8948767 chrX 8956282 8956297 roo 6 7530 2.0 6.0 4.0 1.2 7545 chrX 8948752 intron rdgA + chrX 8952524 intron rdgA + chrX 8956297 intron rdgA + chrX_6_8950001 chrX_8950001 RAL-370 2711 chrX 8995536 8995543 chrX 8995722 8995748 5 198 4.5 1.0 2.8 1.3 212 chrX 8995536 intron,intron rdgA +,CR43836 - chrX 8995642 intron,intron rdgA +,CR43836 - chrX 8995748 intron,intron rdgA +,CR43836 - chrX_5_8995001 chrX_8995001 RAL-370 2712 chrX 9041989 9042020 chrX 9042117 9042149 4 128 0.0 2.5 1.2 1.8 160 chrX 9041989 intron,intron CR43836 -,CG42388 + chrX 9042069 intron,intron CR43836 -,CG42388 + chrX 9042149 intron,intron CR43836 -,CG42388 + chrX_4_9040001 chrX_9040001 RAL-370 2713 chrX 9220200 9220250 chrX 9220304 9220354 12 104 1.0 3.0 2.0 4.0 154 chrX 9220200 intron t - chrX 9220277 intron t - chrX 9220354 intron t - chrX_12_9220001 chrX_9220001 RAL-370 2714 chrX 9337927 9337967 chrX 9338033 9338079 16 101 1.5 1.0 1.2 7.3 152 chrX 9337927 intron CG34449 - chrX 9338003 intron CG34449 - chrX 9338079 exon CG34449 - chrX_16_9335001 chrX_9335001 RAL-370 2715 chrX 9429431 9429481 chrX 9430055 9430105 9 618 1.0 1.5 1.2 4.1 674 chrX 9429431 intron mgl - chrX 9429768 intron mgl - chrX 9430105 intron mgl - chrX_9_9425001 chrX_9425001 RAL-370 2716 chrX 9508121 9508129 chrX 9509659 9509664 jockey 4 1537 7.0 2.5 4.8 0.7 1543 chrX 9508121 intron CG32700 - chrX 9508892 intron CG32700 - chrX 9509664 intron CG32700 - chrX_4_9505001 chrX_9505001 RAL-370 2717 chrX 9508135 9508161 chrX 9509652 9509688 jockey 6 1533 3.5 2.5 3.0 1.5 1553 chrX 9508135 intron CG32700 - chrX 9508912 intron CG32700 - chrX 9509688 intron CG32700 - chrX_6_9505001 chrX_9505001 RAL-370 2718 chrX 9575799 9575813 chrX 9576115 9576155 mdg3 5 335 6.5 4.5 5.5 0.8 356 chrX 9575799 intron,exon CG32699 -,CG42395 - chrX 9575977 intron,intron CG32699 -,CG42395 - chrX 9576155 intron,5` UTR CG32699 -,CG42395 - chrX_5_9575001 chrX_9575001 RAL-370 2719 chrX 9599156 9599200 chrX 9599253 9599294 12 92 4.0 5.0 4.5 2.2 138 chrX 9599156 intergenic not near genes chrX 9599225 intergenic not near genes chrX 9599294 intergenic not near genes chrX_12_9595001 chrX_9595001 RAL-370 2720 chrX 9636450 9636489 chrX 9636625 9636673 15 183 2.5 1.5 2.0 5.0 223 chrX 9636450 intron l(1)G0232 - chrX 9636562 intron l(1)G0232 - chrX 9636673 intron l(1)G0232 - chrX_15_9635001 chrX_9635001 RAL-370 2721 chrX 9758032 9758079 chrX 9758137 9758184 5 105 2.0 0.0 1.0 2.5 152 chrX 9758032 intergenic not near genes chrX 9758108 intergenic not near genes chrX 9758184 intergenic not near genes chrX_5_9755001 chrX_9755001 RAL-370 2722 chrX 9792737 9792771 chrX 9792828 9792867 7 95 6.5 3.5 5.0 1.2 130 chrX 9792737 intron CG32698 + chrX 9792802 intron CG32698 + chrX 9792867 intron CG32698 + chrX_7_9790001 chrX_9790001 RAL-370 2723 chrX 9839320 9839373 chrX 9839423 9839441 6 94 0.0 3.0 1.5 2.4 121 chrX 9839320 intron CG32698 + chrX 9839380 intron CG32698 + chrX 9839441 intron CG32698 + chrX_6_9835001 chrX_9835001 RAL-370 2724 chrX 9845361 9845361 chrX 14544906 14544906 4 4699545 14.0 12.0 13.0 0.3 4699545 chrX 9845361 intron CG32698 + chrX 12195134 intron Ten-a + chrX 14544906 intergenic not near genes chrX_4_12195001 chrX_12195001 RAL-370 2725 chrX 9925509 9925560 chrX 9925611 9925662 11 99 3.5 6.0 4.8 1.9 153 chrX 9925509 intergenic not near genes chrX 9925586 intergenic not near genes chrX 9925662 intergenic not near genes chrX_11_9925001 chrX_9925001 RAL-370 2726 chrX 10119508 10119567 chrX 10119619 10119665 7 101 19.0 23.5 21.2 0.3 157 chrX 10119508 intron,intron RhoU +,CR44894 - chrX 10119586 intron,intron RhoU +,CR44894 - chrX 10119665 intron,intron RhoU +,CR44894 - chrX_7_10115001 chrX_10115001 RAL-370 2727 chrX 10138195 10138242 chrX 10145719 10145762 412 7 7522 3.5 1.5 2.5 2.0 7567 chrX 10138195 intron,intron RhoU +,CR44894 - chrX 10141978 intron,intron RhoU +,CR44894 - chrX 10145762 intron,intron RhoU +,CR44894 - chrX_7_10140001 chrX_10140001 RAL-370 2728 chrX 10248624 10248646 chrX 10248720 10248743 4 97 4.0 2.0 3.0 1.0 119 chrX 10248624 intron Hk - chrX 10248684 intron Hk - chrX 10248743 intron Hk - chrX_4_10245001 chrX_10245001 RAL-370 2729 chrX 10285876 10285889 chrX 10286230 10286241 6 355 7.0 2.0 4.5 1.1 365 chrX 10285876 intron alpha-Man-I - chrX 10286058 intron alpha-Man-I - chrX 10286241 intron alpha-Man-I - chrX_6_10285001 chrX_10285001 RAL-370 2730 chrX 10545076 10545117 chrX 10545379 10545421 7 304 2.5 4.0 3.2 1.7 345 chrX 10545076 intron spri - chrX 10545248 intron spri - chrX 10545421 intron spri - chrX_7_10545001 chrX_10545001 RAL-370 2731 chrX 10550317 10550364 chrX 10550415 10550458 9 96 2.0 2.5 2.2 2.8 141 chrX 10550317 intron spri - chrX 10550388 intron spri - chrX 10550458 intron spri - chrX_9_10550001 chrX_10550001 RAL-370 2732 chrX 10550838 10550872 chrX 10552325 10552359 hobo 10 1484 3.0 2.5 2.8 2.6 1521 chrX 10550838 intron spri - chrX 10551598 intron spri - chrX 10552359 intron spri - chrX_10_10550001 chrX_10550001 RAL-370 2733 chrX 10686032 10686079 chrX 10691188 10691236 roo 12 5157 3.0 3.5 3.2 2.9 5204 chrX 10686032 intron X11Lbeta + chrX 10688634 intron X11Lbeta + chrX 10691236 intron X11Lbeta + chrX_12_10685001 chrX_10685001 RAL-370 2734 chrX 10711064 10711097 chrX 10715014 10715027 5 3934 19.0 10.5 14.8 0.3 3963 chrX 10711064 intergenic CG32676 -,X11Lbeta + chrX 10713046 3` UTR CG32676 - chrX 10715027 exon CG32676 - chrX_5_10710001 chrX_10710001 RAL-370 2735 chrX 10719125 10719149 chrX 10719198 10719253 4 96 0.0 1.5 0.8 2.2 128 chrX 10719125 intron CG32676 - chrX 10719189 intron CG32676 - chrX 10719253 intron CG32676 - chrX_4_10715001 chrX_10715001 RAL-370 2736 chrX 10772672 10772693 chrX 10772775 10772793 Tirant 4 100 2.5 4.5 3.5 0.9 121 chrX 10772672 intron CG15211 + chrX 10772732 intron CG15211 + chrX 10772793 intron CG15211 + chrX_4_10770001 chrX_10770001 RAL-370 2737 chrX 10803017 10803041 chrX 10803122 10803145 11 101 10.0 7.0 8.5 1.2 128 chrX 10803017 intron Imp - chrX 10803081 intron Imp - chrX 10803145 intron Imp - chrX_11_10800001 chrX_10800001 RAL-370 2738 chrX 10933902 10933944 chrX 10934010 10934032 11 106 0.5 3.5 2.0 3.7 130 chrX 10933902 intron Myo10A + chrX 10933967 intron Myo10A + chrX 10934032 intron Myo10A + chrX_11_10930001 chrX_10930001 RAL-370 2739 chrX 11042437 11042470 chrX 11042537 11042568 6 99 1.5 2.5 2.0 2.0 131 chrX 11042437 intergenic not near genes chrX 11042502 intergenic not near genes chrX 11042568 intergenic not near genes chrX_6_11040001 chrX_11040001 RAL-370 2740 chrX 11095983 11096018 chrX 11103105 11103140 HMS-Beagle 6 7122 3.5 7.5 5.5 0.9 7157 chrX 11095983 intergenic not near genes chrX 11099562 intergenic not near genes chrX 11103140 intron CG42249 + chrX_6_11095001 chrX_11095001 RAL-370 2741 chrX 11141960 11142058 chrX 11142056 11142150 6 92 0.0 0.0 0.0 6.0 190 chrX 11141960 intergenic CG15199 - chrX 11142055 intergenic CG15199 -,CG15202 + chrX 11142150 intergenic CG15199 -,CG15202 + chrX_6_11140001 chrX_11140001 RAL-370 2742 chrX 11165886 11165901 chrX 11166237 11166253 4 350 4.5 4.0 4.2 0.8 367 chrX 11165886 intergenic not near genes chrX 11166070 intergenic not near genes chrX 11166253 intergenic not near genes chrX_4_11165001 chrX_11165001 RAL-370 2743 chrX 11184233 11184256 chrX 11189332 11189355 flea 8 5098 3.5 3.5 3.5 1.8 5122 chrX 11184233 intergenic not near genes chrX 11186794 intergenic not near genes chrX 11189355 intergenic not near genes chrX_8_11185001 chrX_11185001 RAL-370 2744 chrX 11268554 11268595 chrX 11270066 11270078 hopper2 6 1507 1.0 8.0 4.5 1.1 1524 chrX 11268554 intron CG44422 - chrX 11269316 intron CG44422 - chrX 11270078 intron CG44422 - chrX_6_11265001 chrX_11265001 RAL-370 2745 chrX 11312041 11312087 chrX 11319412 11319460 Stalker2 9 7369 4.0 4.5 4.2 1.7 7419 chrX 11312041 intergenic not near genes chrX 11315750 intergenic not near genes chrX 11319460 intergenic not near genes chrX_9_11315001 chrX_11315001 RAL-370 2746 chrX 11379745 11379792 chrX 11379910 11379955 15 164 2.5 3.5 3.0 3.8 210 chrX 11379745 intron dlg1 + chrX 11379850 intron dlg1 + chrX 11379955 intron dlg1 + chrX_15_11375001 chrX_11375001 RAL-370 2747 chrX 11535026 11535043 chrX 11541516 11541533 Burdock 7 6489 7.0 6.5 6.8 0.9 6507 chrX 11535026 intron Drak + chrX 11538280 intron Drak + chrX 11541533 intron Drak + chrX_7_11535001 chrX_11535001 RAL-370 2748 chrX 11558265 11558296 chrX 11558368 11558389 10 102 4.0 0.5 2.2 3.1 124 chrX 11558265 intron CG1572 - chrX 11558327 intron CG1572 - chrX 11558389 intron CG1572 - chrX_10_11555001 chrX_11555001 RAL-370 2749 chrX 11633396 11633444 chrX 11640470 11640518 297 6 7074 1.0 4.5 2.8 1.6 7122 chrX 11633396 intron Ptp10D + chrX 11636957 intron Ptp10D + chrX 11640518 intron Ptp10D + chrX_6_11635001 chrX_11635001 RAL-370 2750 chrX 11645091 11645137 chrX 11648280 11648327 NOF 4 3189 1.5 2.5 2.0 1.3 3236 chrX 11645091 intron Ptp10D + chrX 11646709 intron Ptp10D + chrX 11648327 intron Ptp10D + chrX_4_11645001 chrX_11645001 RAL-370 2751 chrX 11705658 11705671 chrX 11705762 11705774 4 103 6.5 3.5 5.0 0.7 116 chrX 11705658 intergenic CG2444 - chrX 11705716 intergenic CG2444 - chrX 11705774 intergenic CG2444 - chrX_4_11705001 chrX_11705001 RAL-370 2752 chrX 11705672 11705696 chrX 11705748 11705800 12 97 4.0 2.0 3.0 3.0 128 chrX 11705672 intergenic CG2444 - chrX 11705736 intergenic CG2444 - chrX 11705800 intergenic CG2444 - chrX_12_11705001 chrX_11705001 RAL-370 2753 chrX 11804667 11804690 chrX 11804790 11804814 5 124 1.0 4.5 2.8 1.3 147 chrX 11804667 intron Hsc70-3 - chrX 11804740 intron Hsc70-3 - chrX 11804814 intron Hsc70-3 - chrX_5_11800001 chrX_11800001 RAL-370 2754 chrX 11822204 11822213 chrX 11822361 11822372 5 158 4.0 8.5 6.2 0.7 168 chrX 11822204 intron rudhira + chrX 11822288 intron rudhira + chrX 11822372 intron rudhira + chrX_5_11820001 chrX_11820001 RAL-370 2755 chrX 11922343 11922376 chrX 11922496 11922529 11 152 5.5 3.5 4.5 2.0 186 chrX 11922343 exon Sclp - chrX 11922436 intron Sclp - chrX 11922529 intron Sclp - chrX_11_11920001 chrX_11920001 RAL-370 2756 chrX 11933910 11933951 chrX 11934016 11934066 15 114 4.0 2.5 3.2 3.6 156 chrX 11933910 3` UTR cac - chrX 11933988 3` UTR cac - chrX 11934066 3` UTR cac - chrX_15_11930001 chrX_11930001 RAL-370 2757 chrX 11936571 11936589 chrX 11936673 11936708 6 115 0.0 4.0 2.0 2.0 137 chrX 11936571 intron cac - chrX 11936640 intron cac - chrX 11936708 exon cac - chrX_6_11935001 chrX_11935001 RAL-370 2758 chrX 12176720 12176743 chrX 12176816 12176839 10 93 1.0 6.5 3.8 2.1 119 chrX 12176720 intron,3` UTR Ten-a +,CG1924 - chrX 12176780 intron,3` UTR Ten-a +,CG1924 - chrX 12176839 intron,3` UTR Ten-a +,CG1924 - chrX_10_12175001 chrX_12175001 RAL-370 2759 chrX 12176746 12176753 chrX 12176813 12176849 6 87 1.0 5.5 3.2 1.4 103 chrX 12176746 intron,3` UTR Ten-a +,CG1924 - chrX 12176798 intron,3` UTR Ten-a +,CG1924 - chrX 12176849 intron,3` UTR Ten-a +,CG1924 - chrX_6_12175001 chrX_12175001 RAL-370 2760 chrX 12272830 12272863 chrX 12272924 12272962 5 98 2.5 2.0 2.2 1.6 132 chrX 12272830 intron Ten-a + chrX 12272896 intron Ten-a + chrX 12272962 intron Ten-a + chrX_5_12270001 chrX_12270001 RAL-370 2761 chrX 12295314 12295322 chrX 12295410 12295418 4 96 5.0 2.5 3.8 0.8 104 chrX 12295314 exon Ten-a + chrX 12295366 intron Ten-a + chrX 12295418 intron Ten-a + chrX_4_12295001 chrX_12295001 RAL-370 2762 chrX 12350754 12350788 chrX 12350855 12350878 8 98 6.0 0.0 3.0 2.0 124 chrX 12350754 intergenic not near genes chrX 12350816 intergenic not near genes chrX 12350878 intergenic not near genes chrX_8_12350001 chrX_12350001 RAL-370 2763 chrX 12375470 12375501 chrX 12375588 12375619 10 118 2.5 1.0 1.8 3.6 149 chrX 12375470 intergenic Ir11a - chrX 12375544 intergenic Ir11a - chrX 12375619 exon Ir11a - chrX_10_12375001 chrX_12375001 RAL-370 2764 chrX 12381852 12381899 chrX 12385785 12385821 flea 4 3924 0.0 5.5 2.8 1.1 3969 chrX 12381852 intergenic not near genes chrX 12383836 intergenic not near genes chrX 12385821 intergenic not near genes chrX_4_12380001 chrX_12380001 RAL-370 2765 chrX 12533771 12533824 chrX 12533868 12533918 6 96 0.0 1.0 0.5 4.0 147 chrX 12533771 intron CG43921 - chrX 12533844 intron CG43921 - chrX 12533918 intron CG43921 - chrX_6_12530001 chrX_12530001 RAL-370 2766 chrX 12930576 12930609 chrX 12937712 12937744 HMS-Beagle 8 7134 0.5 5.5 3.0 2.0 7168 chrX 12930576 intron fne + chrX 12934160 intron fne + chrX 12937744 intron fne + chrX_8_12930001 chrX_12930001 RAL-370 2767 chrX 12960748 12960794 chrX 12960849 12960895 12 101 5.0 4.5 4.8 2.1 147 chrX 12960748 3` UTR CG32642 + chrX 12960822 intergenic CG32642 + chrX 12960895 intergenic CG32642 + chrX_12_12960001 chrX_12960001 RAL-370 2768 chrX 13146578 13146631 chrX 13146686 13146738 10 108 2.0 1.5 1.8 3.6 160 chrX 13146578 intron CG32645 + chrX 13146658 intron CG32645 + chrX 13146738 intron CG32645 + chrX_10_13145001 chrX_13145001 RAL-370 2769 chrX 13161684 13161715 chrX 13161774 13161812 10 96 1.5 1.0 1.2 4.5 128 chrX 13161684 3` UTR CG12096 + chrX 13161748 3` UTR,3` UTR CG12096 +,CG34411 - chrX 13161812 3` UTR,3` UTR CG12096 +,CG34411 - chrX_10_13160001 chrX_13160001 RAL-370 2770 chrX 13236886 13236902 chrX 13236981 13236998 6 100 0.0 3.0 1.5 2.4 112 chrX 13236886 intron mew - chrX 13236942 intron mew - chrX 13236998 intron mew - chrX_6_13235001 chrX_13235001 RAL-370 2771 chrX 13272157 13272175 chrX 13272254 13272270 5 97 8.5 8.0 8.2 0.5 113 chrX 13272157 intron HDAC4 - chrX 13272214 intron HDAC4 - chrX 13272270 intron HDAC4 - chrX_5_13270001 chrX_13270001 RAL-370 2772 chrX 13314401 13314424 chrX 13314515 13314539 5 114 2.5 0.0 1.2 2.3 138 chrX 13314401 intron IP3K2 + chrX 13314470 intron IP3K2 + chrX 13314539 intron IP3K2 + chrX_5_13310001 chrX_13310001 RAL-370 2773 chrX 13374826 13374869 chrX 13374926 13374968 12 99 1.5 2.5 2.0 4.0 142 chrX 13374826 intron CG1640 + chrX 13374897 intron CG1640 + chrX 13374968 intron CG1640 + chrX_12_13370001 chrX_13370001 RAL-370 2774 chrX 13401464 13401510 chrX 13401836 13401880 jockey 10 372 3.0 0.5 1.8 3.6 416 chrX 13401464 intergenic CG1673 +,CG12725 - chrX 13401672 intergenic CG12725 -,CG1673 + chrX 13401880 3` UTR CG12725 - chrX_10_13400001 chrX_13400001 RAL-370 2775 chrX 13406123 13406158 chrX 13406253 13406296 6 118 0.0 5.0 2.5 1.7 173 chrX 13406123 intron GstT4 + chrX 13406210 intron GstT4 + chrX 13406296 intron GstT4 + chrX_6_13405001 chrX_13405001 RAL-370 2776 chrX 13429469 13429484 chrX 13430638 13430649 jockey 8 1168 0.0 11.5 5.8 1.2 1180 chrX 13429469 intergenic not near genes chrX 13430059 intergenic not near genes chrX 13430649 intergenic not near genes chrX_8_13430001 chrX_13430001 RAL-370 2777 chrX 13432813 13432860 chrX 13432958 13432978 10 139 3.0 3.0 3.0 2.5 165 chrX 13432813 intergenic not near genes chrX 13432896 intergenic not near genes chrX 13432978 intergenic not near genes chrX_10_13430001 chrX_13430001 RAL-370 2778 chrX 13463629 13463662 chrX 13469226 13469259 mdg3 6 5597 3.0 1.0 2.0 2.0 5630 chrX 13463629 intron Neto + chrX 13466444 intron Neto + chrX 13469259 intron Neto + chrX_6_13465001 chrX_13465001 RAL-370 2779 chrX 13560542 13560595 chrX 13560643 13560693 16 99 3.0 1.0 2.0 5.3 151 chrX 13560542 intergenic not near genes chrX 13560618 intergenic not near genes chrX 13560693 intergenic not near genes chrX_16_13560001 chrX_13560001 RAL-370 2780 chrX 13795499 13795505 chrX 13798813 13798819 6 3314 15.0 8.5 11.8 0.5 3320 chrX 13795499 intron inaE + chrX 13797159 intron,exon inaE +,CG10996 - chrX 13798819 intron inaE + chrX_6_13795001 chrX_13795001 RAL-370 2781 chrX 13821454 13821465 chrX 13821550 13821562 4 96 4.0 2.5 3.2 1.0 108 chrX 13821454 intron Clic - chrX 13821508 intron Clic - chrX 13821562 intron Clic - chrX_4_13820001 chrX_13820001 RAL-370 2782 chrX 13934295 13934313 chrX 13934398 13934416 4 102 3.0 6.5 4.8 0.7 121 chrX 13934295 intron mamo - chrX 13934356 intron mamo - chrX 13934416 intron mamo - chrX_4_13930001 chrX_13930001 RAL-370 2783 chrX 13937946 13938002 chrX 13941246 13941293 I-element 5 3296 0.0 0.0 0.0 5.0 3347 chrX 13937946 intron mamo - chrX 13939620 intron mamo - chrX 13941293 intron mamo - chrX_5_13935001 chrX_13935001 RAL-370 2784 chrX 13057300 13057304 chrX 13966949 13966949 5 909646 12.5 6.0 9.2 0.5 909649 chrX 13057300 intron rad + chrX 13512124 intron Neto + chrX 13966949 intron mamo - chrX_5_13510001 chrX_13510001 RAL-370 2785 chrX 14105004 14105055 chrX 14114175 14114210 roo 15 9166 3.0 3.0 3.0 3.8 9206 chrX 14105004 intergenic not near genes chrX 14109607 intergenic not near genes chrX 14114210 5` UTR CR44657 + chrX_15_14105001 chrX_14105001 RAL-370 2786 chrX 14131479 14131518 chrX 14131577 14131600 4 90 1.0 5.0 3.0 1.0 121 chrX 14131479 intergenic not near genes chrX 14131540 intergenic not near genes chrX 14131600 intergenic not near genes chrX_4_14130001 chrX_14130001 RAL-370 2787 chrX 14173048 14173071 chrX 14173150 14173174 5 101 0.5 7.0 3.8 1.0 126 chrX 14173048 intergenic betaNACtes1 - chrX 14173111 intergenic betaNACtes1 - chrX 14173174 intergenic not near genes chrX_5_14170001 chrX_14170001 RAL-370 2788 chrX 14209452 14209490 chrX 14209554 14209600 7 108 3.5 6.5 5.0 1.2 148 chrX 14209452 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209526 intron,intron l(1)G0007 +,l(1)G0469 - chrX 14209600 intron,intron l(1)G0007 +,l(1)G0469 - chrX_7_14205001 chrX_14205001 RAL-370 2789 chrX 14401557 14401574 chrX 14401685 14401702 7 128 2.5 7.0 4.8 1.2 145 chrX 14401557 intron dpr8 + chrX 14401630 intron dpr8 + chrX 14401702 intron dpr8 + chrX_7_14400001 chrX_14400001 RAL-370 2790 chrX 14500499 14500515 chrX 14500620 14500635 6 121 3.5 4.5 4.0 1.2 136 chrX 14500499 intergenic not near genes chrX 14500567 intergenic not near genes chrX 14500635 intergenic not near genes chrX_6_14500001 chrX_14500001 RAL-370 2791 chrX 14597722 14597739 chrX 14597818 14597836 7 95 6.5 3.0 4.8 1.2 114 chrX 14597722 intron CG9413 - chrX 14597779 intron CG9413 - chrX 14597836 intron CG9413 - chrX_7_14595001 chrX_14595001 RAL-370 2792 chrX 14636453 14636492 chrX 14641912 14641945 I-element 6 5459 2.5 3.5 3.0 1.5 5492 chrX 14636453 intron NetA - chrX 14639199 intron NetA - chrX 14641945 intron NetA - chrX_6_14635001 chrX_14635001 RAL-370 2793 chrX 14714033 14714064 chrX 14714135 14714165 7 101 2.5 5.5 4.0 1.4 132 chrX 14714033 intron NetB - chrX 14714099 intron NetB - chrX 14714165 intron NetB - chrX_7_14710001 chrX_14710001 RAL-370 2794 chrX 14767936 14767977 chrX 14768036 14768077 10 94 0.5 0.5 0.5 6.7 141 chrX 14767936 intergenic not near genes chrX 14768006 intergenic not near genes chrX 14768077 intergenic not near genes chrX_10_14765001 chrX_14765001 RAL-370 2795 chrX 14778017 14778047 chrX 14782834 14782860 Doc 6 4816 3.5 3.5 3.5 1.3 4843 chrX 14778017 intergenic CG5347 + chrX 14780438 intergenic not near genes chrX 14782860 intergenic Ag5r2 - chrX_6_14780001 chrX_14780001 RAL-370 2796 chrX 14818763 14818796 chrX 14823986 14824020 copia 7 5214 4.0 4.0 4.0 1.4 5257 chrX 14818763 intron rut - chrX 14821392 intron rut - chrX 14824020 intron rut - chrX_7_14820001 chrX_14820001 RAL-370 2797 chrX 14890453 14890486 chrX 14890548 14890582 6 95 3.0 2.0 2.5 1.7 129 chrX 14890453 intron,intron Flo2 +,CG9514 - chrX 14890518 intron,intron Flo2 +,CG9514 - chrX 14890582 intron,intron Flo2 +,CG9514 - chrX_6_14890001 chrX_14890001 RAL-370 2798 chrX 14921936 14921989 chrX 14922334 14922379 16 396 5.0 6.5 5.8 2.4 443 chrX 14921936 intron,intron Flo2 +,CG9503 - chrX 14922158 intron,intron Flo2 +,CG9503 - chrX 14922379 intron,intron Flo2 +,CG9503 - chrX_16_14920001 chrX_14920001 RAL-370 2799 chrX 14936855 14936888 chrX 14946132 14946165 roo 6 9277 3.0 6.0 4.5 1.1 9310 chrX 14936855 intron pdgy - chrX 14941510 intron pdgy - chrX 14946165 intron pdgy - chrX_6_14940001 chrX_14940001 RAL-370 2800 chrX 14968053 14968101 chrX 14968152 14968200 10 98 0.0 3.5 1.8 3.6 147 chrX 14968053 intron eag + chrX 14968126 intron eag + chrX 14968200 intron eag + chrX_10_14965001 chrX_14965001 RAL-370 2801 chrX 14981693 14981721 chrX 14981785 14981820 4 97 6.0 0.0 3.0 1.0 127 chrX 14981693 intron eag + chrX 14981756 intron eag + chrX 14981820 intron eag + chrX_4_14980001 chrX_14980001 RAL-370 2802 chrX 15127203 15127242 chrX 15127384 15127423 8 181 1.5 1.5 1.5 3.2 220 chrX 15127203 intron drd + chrX 15127313 intron drd + chrX 15127423 intron drd + chrX_8_15125001 chrX_15125001 RAL-370 2803 chrX 15248242 15248295 chrX 15248338 15248391 7 96 1.5 2.5 2.0 2.3 149 chrX 15248242 intergenic not near genes chrX 15248316 intergenic not near genes chrX 15248391 intergenic not near genes chrX_7_15245001 chrX_15245001 RAL-370 2804 chrX 15273724 15273734 chrX 15274870 15274920 1360 4 1167 4.5 2.0 3.2 1.0 1196 chrX 15273724 intergenic not near genes chrX 15274322 intergenic not near genes chrX 15274920 intergenic not near genes chrX_4_15270001 chrX_15270001 RAL-370 2805 chrX 15277620 15277656 chrX 15277725 15277761 7 105 3.5 5.5 4.5 1.3 141 chrX 15277620 intergenic not near genes chrX 15277690 intergenic not near genes chrX 15277761 intergenic not near genes chrX_7_15275001 chrX_15275001 RAL-370 2806 chrX 15358286 15358338 chrX 15358394 15358441 8 107 0.0 1.5 0.8 4.4 155 chrX 15358286 intron acj6 - chrX 15358364 intron acj6 - chrX 15358441 intron acj6 - chrX_8_15355001 chrX_15355001 RAL-370 2807 chrX 15413049 15413083 chrX 15417353 15417403 Juan 7 4313 4.5 0.0 2.2 2.2 4354 chrX 15413049 intron Cngl - chrX 15415226 intron Cngl - chrX 15417403 intron Cngl - chrX_7_15415001 chrX_15415001 RAL-370 2808 chrX 15591185 15591190 chrX 15591281 15591286 4 96 0.0 7.0 3.5 0.9 101 chrX 15591185 intron CG9220 - chrX 15591236 intron CG9220 - chrX 15591286 intron CG9220 - chrX_4_15590001 chrX_15590001 RAL-370 2809 chrX 15671180 15671197 chrX 15671287 15671304 7 107 5.5 0.0 2.8 1.8 124 chrX 15671180 intergenic CG15646 - chrX 15671242 intergenic CG15646 - chrX 15671304 intergenic CG15646 - chrX_7_15670001 chrX_15670001 RAL-370 2810 chrX 15678017 15678068 chrX 15678114 15678165 15 94 3.5 7.0 5.2 2.4 148 chrX 15678017 intergenic CG12708 + chrX 15678091 intergenic CG12708 + chrX 15678165 intergenic CG12708 + chrX_15_15675001 chrX_15675001 RAL-370 2811 chrX 16059641 16059687 chrX 16059738 16059784 19 93 3.5 2.5 3.0 4.8 143 chrX 16059641 exon Muc14A + chrX 16059712 exon Muc14A + chrX 16059784 exon Muc14A + chrX_19_16055001 chrX_16055001 RAL-370 2812 chrX 16074119 16074157 chrX 16074473 16074513 4 356 4.0 1.0 2.5 1.1 394 chrX 16074119 intergenic not near genes chrX 16074316 intergenic Tob - chrX 16074513 intergenic Tob - chrX_4_16070001 chrX_16070001 RAL-370 2813 chrX 16101895 16101929 chrX 16102126 16102159 9 227 3.5 4.5 4.0 1.8 264 chrX 16101895 intron,intron CG42353 -,CG42354 - chrX 16102027 intron,intron CG42353 -,CG42354 - chrX 16102159 intron,intron CG42353 -,CG42354 - chrX_9_16100001 chrX_16100001 RAL-370 2814 chrX 16222762 16222810 chrX 16231132 16231179 roo 13 8368 3.0 1.5 2.2 4.1 8417 chrX 16222762 intergenic not near genes chrX 16226970 intergenic not near genes chrX 16231179 intergenic not near genes chrX_13_16225001 chrX_16225001 RAL-370 2815 chrX 16340647 16340658 chrX 16349822 16349833 roo 5 9175 2.5 2.0 2.2 1.6 9186 chrX 16340647 intergenic Dsp1 + chrX 16345240 intergenic not near genes chrX 16349833 intergenic sl + chrX_5_16345001 chrX_16345001 RAL-370 2816 chrX 16492637 16492674 chrX 16498234 16498271 mdg3 12 5597 4.5 3.5 4.0 2.4 5634 chrX 16492637 intron para - chrX 16495454 intron para - chrX 16498271 exon para - chrX_12_16495001 chrX_16495001 RAL-370 2817 chrX 16618040 16618082 chrX 16618151 16618187 13 110 3.5 4.5 4.0 2.6 147 chrX 16618040 intron CG9782 - chrX 16618114 intron CG9782 - chrX 16618187 intron CG9782 - chrX_13_16615001 chrX_16615001 RAL-370 2818 chrX 16623469 16623484 chrX 16623575 16623589 4 105 4.5 0.0 2.2 1.2 120 chrX 16623469 intergenic not near genes chrX 16623529 intergenic Rok - chrX 16623589 intergenic Rok - chrX_4_16620001 chrX_16620001 RAL-370 2819 chrX 16650909 16650937 chrX 16651006 16651029 5 95 4.5 0.0 2.2 1.6 120 chrX 16650909 intergenic CG32573 +,CG42512 + chrX 16650969 intergenic CG32573 +,CG42512 + chrX 16651029 intergenic CG32573 +,CG42512 + chrX_5_16650001 chrX_16650001 RAL-370 2820 chrX 16681633 16681655 chrX 16681726 16681751 7 95 0.5 4.0 2.2 2.2 118 chrX 16681633 3` UTR,intron sing +,Axs - chrX 16681692 3` UTR,intron sing +,Axs - chrX 16681751 3` UTR,intron sing +,Axs - chrX_7_16680001 chrX_16680001 RAL-370 2821 chrX 16689603 16689655 chrX 16689709 16689758 11 98 1.5 6.5 4.0 2.2 155 chrX 16689603 intron Sep4 - chrX 16689680 intron Sep4 - chrX 16689758 intron Sep4 - chrX_11_16685001 chrX_16685001 RAL-370 2822 chrX 16690460 16690478 chrX 16690533 16690561 7 90 2.5 4.0 3.2 1.7 101 chrX 16690460 intron Sep4 - chrX 16690510 intron Sep4 - chrX 16690561 intron Sep4 - chrX_7_16690001 chrX_16690001 RAL-370 2823 chrX 16785255 16785296 chrX 16785378 16785420 13 124 6.5 4.5 5.5 2.0 165 chrX 16785255 3` UTR CG9609 - chrX 16785338 3` UTR CG9609 - chrX 16785420 3` UTR CG9609 - chrX_13_16785001 chrX_16785001 RAL-370 2824 chrX 16821216 16821254 chrX 16821316 16821355 4 100 1.5 0.0 0.8 2.2 139 chrX 16821216 intron CG4829 + chrX 16821286 intron CG4829 + chrX 16821355 intron CG4829 + chrX_4_16820001 chrX_16820001 RAL-370 2825 chrX 16833188 16833213 chrX 16833292 16833309 7 104 5.5 0.0 2.8 1.8 121 chrX 16833188 intron CG13004 - chrX 16833248 intron CG13004 - chrX 16833309 intron CG13004 - chrX_7_16830001 chrX_16830001 RAL-370 2826 chrX 16839055 16839110 chrX 16839326 16839381 14 268 2.5 5.5 4.0 2.8 326 chrX 16839055 3` UTR RSG7 - chrX 16839218 3` UTR RSG7 - chrX 16839381 3` UTR RSG7 - chrX_14_16835001 chrX_16835001 RAL-370 2827 chrX 16865103 16865147 chrX 16865478 16865495 10 371 3.5 0.0 1.8 3.6 392 chrX 16865103 intron CG13003 - chrX 16865299 intron CG13003 - chrX 16865495 intron CG13003 - chrX_10_16865001 chrX_16865001 RAL-370 2828 chrX 16870060 16870092 chrX 16870162 16870195 6 101 3.0 3.5 3.2 1.4 135 chrX 16870060 intron CG13003 - chrX 16870128 intron CG13003 - chrX 16870195 intron CG13003 - chrX_6_16870001 chrX_16870001 RAL-370 2829 chrX 1053117 1053123 chrX 16983076 16983076 5 15929956 9.5 6.5 8.0 0.6 15929959 chrX 1053117 intron CR44779 + chrX 9018096 intron,intron rdgA +,CR43836 - chrX 16983076 intron CG45002 - chrX_5_9015001 chrX_9015001 RAL-370 2830 chrX 16993474 16993524 chrX 16993675 16993725 13 200 1.0 4.0 2.5 3.7 251 chrX 16993474 intron CG45002 - chrX 16993600 intron CG45002 - chrX 16993725 intron CG45002 - chrX_13_16990001 chrX_16990001 RAL-370 2831 chrX 17011982 17011999 chrX 17012055 17012060 5 82 3.5 5.5 4.5 0.9 78 chrX 17011982 intron CG45002 - chrX 17012021 intron CG45002 - chrX 17012060 intron CG45002 - chrX_5_17010001 chrX_17010001 RAL-370 2832 chrX 17052912 17052924 chrX 17053013 17053025 7 101 0.0 0.0 0.0 7.0 113 chrX 17052912 intron CG45002 - chrX 17052968 intron CG45002 - chrX 17053025 intron CG45002 - chrX_7_17050001 chrX_17050001 RAL-370 2833 chrX 17057927 17057946 chrX 17058186 17058208 pogo 4 261 1.0 3.0 2.0 1.3 281 chrX 17057927 intron CG45002 - chrX 17058068 intron CG45002 - chrX 17058208 intron CG45002 - chrX_4_17055001 chrX_17055001 RAL-370 2834 chrX 17088189 17088201 chrX 17088801 17088814 4 613 0.0 3.0 1.5 1.6 625 chrX 17088189 intergenic not near genes chrX 17088502 intergenic not near genes chrX 17088814 intergenic not near genes chrX_4_17085001 chrX_17085001 RAL-370 2835 chrX 17195185 17195231 chrX 17200291 17200337 flea 16 5106 4.5 7.0 5.8 2.4 5152 chrX 17195185 3` UTR baz + chrX 17197761 3` UTR baz + chrX 17200337 3` UTR baz + chrX_16_17195001 chrX_17195001 RAL-370 2836 chrX 17229940 17229959 chrX 17230063 17230081 6 123 6.0 4.0 5.0 1.0 141 chrX 17229940 intergenic CG10597 - chrX 17230010 intergenic CG10597 - chrX 17230081 intergenic CG10597 - chrX_6_17230001 chrX_17230001 RAL-370 2837 chrX 17282858 17282898 chrX 17282953 17282960 10 89 3.0 0.0 1.5 4.0 102 chrX 17282858 intron CG5445 + chrX 17282909 5` UTR CG5445 + chrX 17282960 5` UTR CG5445 + chrX_10_17280001 chrX_17280001 RAL-370 2838 chrX 17352580 17352623 chrX 17352694 17352746 12 121 0.5 6.0 3.2 2.9 166 chrX 17352580 intergenic not near genes chrX 17352663 intergenic not near genes chrX 17352746 intergenic not near genes chrX_12_17350001 chrX_17350001 RAL-370 2839 chrX 17435732 17435780 chrX 17435828 17435875 10 95 3.0 5.0 4.0 2.0 143 chrX 17435732 intron CG12994 - chrX 17435804 intron CG12994 - chrX 17435875 intron CG12994 - chrX_10_17435001 chrX_17435001 RAL-370 2840 chrX 17476458 17476468 chrX 17476539 17476565 4 92 6.5 2.5 4.5 0.7 107 chrX 17476458 intron CG43658 - chrX 17476512 intron CG43658 - chrX 17476565 intron CG43658 - chrX_4_17475001 chrX_17475001 RAL-370 2841 chrX 17476473 17476482 chrX 17476536 17476563 5 80 5.0 2.5 3.8 1.0 90 chrX 17476473 intron CG43658 - chrX 17476518 intron CG43658 - chrX 17476563 intron CG43658 - chrX_5_17475001 chrX_17475001 RAL-370 2842 chrX 17502334 17502367 chrX 17502433 17502467 6 100 4.0 4.0 4.0 1.2 133 chrX 17502334 intron CG43658 - chrX 17502400 intron CG43658 - chrX 17502467 intron CG43658 - chrX_6_17500001 chrX_17500001 RAL-370 2843 chrX 17594493 17594539 chrX 17594705 17594738 9 208 3.0 3.0 3.0 2.2 245 chrX 17594493 intron CG12991 + chrX 17594616 intron CG12991 + chrX 17594738 intron CG12991 + chrX_9_17590001 chrX_17590001 RAL-370 2844 chrX 17743268 17743280 chrX 17743380 17743392 5 112 8.0 4.0 6.0 0.7 124 chrX 17743268 intron CG42684 + chrX 17743330 intron CG42684 + chrX 17743392 intron CG42684 + chrX_5_17740001 chrX_17740001 RAL-370 2845 chrX 17766353 17766374 chrX 17766461 17766492 7 113 2.5 3.0 2.8 1.8 139 chrX 17766353 intergenic not near genes chrX 17766422 intergenic not near genes chrX 17766492 intergenic not near genes chrX_7_17765001 chrX_17765001 RAL-370 2846 chrX 17778355 17778399 chrX 17778457 17778505 11 102 4.0 2.5 3.2 2.6 150 chrX 17778355 3` UTR unc-4 + chrX 17778430 3` UTR unc-4 + chrX 17778505 3` UTR unc-4 + chrX_11_17775001 chrX_17775001 RAL-370 2847 chrX 17782202 17782240 chrX 17782320 17782358 9 118 2.0 3.5 2.8 2.4 156 chrX 17782202 intergenic not near genes chrX 17782280 intergenic not near genes chrX 17782358 intergenic not near genes chrX_9_17780001 chrX_17780001 RAL-370 2848 chrX 17782574 17782597 chrX 17782655 17782677 5 97 2.5 2.0 2.2 1.6 103 chrX 17782574 intergenic not near genes chrX 17782626 intergenic not near genes chrX 17782677 intergenic not near genes chrX_5_17780001 chrX_17780001 RAL-370 2849 chrX 17792937 17792978 chrX 17796255 17796296 flea 7 3309 1.0 3.5 2.2 2.2 3359 chrX 17792937 intron OdsH + chrX 17794616 intron OdsH + chrX 17796296 intron OdsH + chrX_7_17790001 chrX_17790001 RAL-370 2850 chrX 17911845 17911879 chrX 17911951 17911987 5 108 0.5 1.5 1.0 2.5 142 chrX 17911845 intron CG6847 + chrX 17911916 intron CG6847 + chrX 17911987 intron CG6847 + chrX_5_17910001 chrX_17910001 RAL-370 2851 chrX 18052730 18052772 chrX 18052829 18052872 7 99 3.5 3.0 3.2 1.7 142 chrX 18052730 intron Sh - chrX 18052801 intron Sh - chrX 18052872 intron Sh - chrX_7_18050001 chrX_18050001 RAL-370 2852 chrX 18177008 18177042 chrX 18177121 18177155 7 113 4.0 3.0 3.5 1.6 147 chrX 18177008 intergenic not near genes chrX 18177082 intergenic not near genes chrX 18177155 intergenic Frq2 + chrX_7_18175001 chrX_18175001 RAL-370 2853 chrX 18194071 18194104 chrX 18194626 18194649 BS 13 554 2.5 4.0 3.2 3.1 578 chrX 18194071 intron Frq2 + chrX 18194360 intron Frq2 + chrX 18194649 intron Frq2 + chrX_13_18190001 chrX_18190001 RAL-370 2854 chrX 18218048 18218065 chrX 18218185 18218202 4 137 6.0 10.0 8.0 0.4 154 chrX 18218048 intron CG33639 - chrX 18218125 intron CG33639 - chrX 18218202 intron CG33639 - chrX_4_18215001 chrX_18215001 RAL-370 2855 chrX 18427360 18427407 chrX 18427791 18427838 16 429 2.0 1.5 1.8 5.7 478 chrX 18427360 intergenic CG42323 + chrX 18427599 intergenic not near genes chrX 18427838 intergenic not near genes chrX_16_18425001 chrX_18425001 RAL-370 2856 chrX 18429484 18429519 chrX 18434810 18434850 Transpac 4 5329 4.5 4.0 4.2 0.8 5366 chrX 18429484 intergenic not near genes chrX 18432167 intergenic not near genes chrX 18434850 intergenic not near genes chrX_4_18430001 chrX_18430001 RAL-370 2857 chrX 18486091 18486142 chrX 18486200 18486229 14 103 0.5 3.0 1.8 5.0 138 chrX 18486091 exon psh - chrX 18486160 intron psh - chrX 18486229 intron psh - chrX_14_18485001 chrX_18485001 RAL-370 2858 chrX 18486571 18486602 chrX 18486670 18486684 15 97 5.0 4.0 4.5 2.7 113 chrX 18486571 intron psh - chrX 18486628 intron psh - chrX 18486684 5` UTR psh - chrX_15_18485001 chrX_18485001 RAL-370 2859 chrX 18558770 18558797 chrX 18558872 18558898 12 102 2.0 6.0 4.0 2.4 128 chrX 18558770 intron Bx + chrX 18558834 intron Bx + chrX 18558898 intron Bx + chrX_12_18555001 chrX_18555001 RAL-370 2860 chrX 18576080 18576102 chrX 18576178 18576200 8 97 0.0 1.5 0.8 4.4 120 chrX 18576080 intergenic not near genes chrX 18576140 intergenic not near genes chrX 18576200 intergenic not near genes chrX_8_18575001 chrX_18575001 RAL-370 2861 chrX 18644997 18645043 chrX 18645115 18645161 14 116 2.5 5.0 3.8 2.9 164 chrX 18644997 intron Rip11 - chrX 18645079 intron Rip11 - chrX 18645161 intron Rip11 - chrX_14_18645001 chrX_18645001 RAL-370 2862 chrX 18698829 18698874 chrX 18698966 18699011 6 137 5.5 3.0 4.2 1.2 182 chrX 18698829 intergenic not near genes chrX 18698920 intergenic not near genes chrX 18699011 intergenic not near genes chrX_6_18695001 chrX_18695001 RAL-370 2863 chrX 18728974 18729007 chrX 18729049 18729057 5 70 2.5 1.0 1.8 1.8 83 chrX 18728974 intergenic not near genes chrX 18729016 intergenic not near genes chrX 18729057 intergenic not near genes chrX_5_18725001 chrX_18725001 RAL-370 2864 chrX 18749853 18749900 chrX 18749955 18750004 11 103 6.5 6.0 6.2 1.5 151 chrX 18749853 intergenic not near genes chrX 18749928 intergenic not near genes chrX 18750004 intergenic not near genes chrX_11_18745001 chrX_18745001 RAL-370 2865 chrX 18896501 18896519 chrX 18896632 18896649 9 131 5.0 2.0 3.5 2.0 148 chrX 18896501 3` UTR CG7349 + chrX 18896575 3` UTR CG7349 + chrX 18896649 intergenic CG7349 + chrX_9_18895001 chrX_18895001 RAL-370 2866 chrX 18944531 18944546 chrX 18944603 18944651 5 90 1.0 2.5 1.8 1.8 120 chrX 18944531 intron CG43759 + chrX 18944591 intron CG43759 + chrX 18944651 intron CG43759 + chrX_5_18940001 chrX_18940001 RAL-370 2867 chrX 18947483 18947529 chrX 18947596 18947642 10 112 4.5 4.0 4.2 1.9 159 chrX 18947483 intron CG43759 + chrX 18947562 intron CG43759 + chrX 18947642 intron CG43759 + chrX_10_18945001 chrX_18945001 RAL-370 2868 chrX 18957054 18957097 chrX 18965735 18965778 roo 6 8680 1.0 2.5 1.8 2.1 8724 chrX 18957054 intron CG43759 + chrX 18961416 intron CG43759 + chrX 18965778 intron CG43759 + chrX_6_18960001 chrX_18960001 RAL-370 2869 chrX 18988282 18988526 chrX 18988458 18988634 13 145 0.0 0.0 0.0 13.0 352 chrX 18988282 intron CG43759 + chrX 18988458 intron CG43759 + chrX 18988634 intron CG43759 + chrX_13_18985001 chrX_18985001 RAL-370 2870 chrX 19019948 19019971 chrX 19020092 19020116 5 146 3.5 2.5 3.0 1.2 168 chrX 19019948 intron CG43759 + chrX 19020032 intron CG43759 + chrX 19020116 intron CG43759 + chrX_5_19020001 chrX_19020001 RAL-370 2871 chrX 19058129 19058168 chrX 19058235 19058274 6 105 3.0 4.0 3.5 1.3 145 chrX 19058129 intron CG14190 + chrX 19058202 intron CG14190 + chrX 19058274 intron CG14190 + chrX_6_19055001 chrX_19055001 RAL-370 2872 chrX 19060399 19060427 chrX 19065203 19065226 Doc 5 4802 4.5 3.0 3.8 1.0 4827 chrX 19060399 intron CG14190 + chrX 19062812 intron CG14190 + chrX 19065226 intron CG14190 + chrX_5_19060001 chrX_19060001 RAL-370 2873 chrX 19073669 19073696 chrX 19073772 19073802 5 105 6.0 4.5 5.2 0.8 133 chrX 19073669 intergenic not near genes chrX 19073736 intergenic not near genes chrX 19073802 intergenic not near genes chrX_5_19070001 chrX_19070001 RAL-370 2874 chrX 19084074 19084105 chrX 19084214 19084245 4 140 0.0 0.0 0.0 4.0 171 chrX 19084074 intergenic CR45503 + chrX 19084160 intergenic CR45503 + chrX 19084245 intergenic CR45503 + chrX_4_19080001 chrX_19080001 RAL-370 2875 chrX 19099636 19099683 chrX 19099738 19099785 14 102 3.0 3.5 3.2 3.3 149 chrX 19099636 intergenic not near genes chrX 19099710 intergenic not near genes chrX 19099785 intergenic not near genes chrX_14_19095001 chrX_19095001 RAL-370 2876 chrX 19109116 19109140 chrX 19109305 19109313 5 193 0.0 2.0 1.0 2.5 197 chrX 19109116 intergenic not near genes chrX 19109214 intergenic not near genes chrX 19109313 intergenic not near genes chrX_5_19105001 chrX_19105001 RAL-370 2877 chrX 19125657 19125695 chrX 19125760 19125799 12 103 5.0 3.5 4.2 2.3 142 chrX 19125657 intron tgy - chrX 19125728 intron tgy - chrX 19125799 intron tgy - chrX_12_19125001 chrX_19125001 RAL-370 2878 chrX 19136556 19136579 chrX 19143494 19143518 412 5 6938 3.5 6.0 4.8 0.9 6962 chrX 19136556 intergenic not near genes chrX 19140037 intergenic not near genes chrX 19143518 3` UTR RhoGAP18B - chrX_5_19140001 chrX_19140001 RAL-370 2879 chrX 19170577 19170592 chrX 19170674 19170689 4 96 9.0 6.0 7.5 0.5 112 chrX 19170577 5` UTR Inx5 - chrX 19170633 5` UTR Inx5 - chrX 19170689 5` UTR Inx5 - chrX_4_19170001 chrX_19170001 RAL-370 2880 chrX 19181994 19182042 chrX 19182126 19182174 9 130 0.0 0.0 0.0 9.0 180 chrX 19181994 3` UTR CG7453 + chrX 19182084 intergenic CG7453 + chrX 19182174 intergenic CG7453 + chrX_9_19180001 chrX_19180001 RAL-370 2881 chrX 19285792 19285829 chrX 19286023 19286058 15 229 3.5 5.5 4.5 2.7 266 chrX 19285792 intron CG8034 - chrX 19285925 intron CG8034 - chrX 19286058 intron CG8034 - chrX_15_19285001 chrX_19285001 RAL-370 2882 chrX 19339735 19339771 chrX 19339831 19339864 6 96 0.0 1.5 0.8 3.3 129 chrX 19339735 intron nAChRalpha7 - chrX 19339800 intron nAChRalpha7 - chrX 19339864 intron nAChRalpha7 - chrX_6_19335001 chrX_19335001 RAL-370 2883 chrX 19356975 19356993 chrX 19358436 19358454 NOF 7 1461 7.0 0.0 3.5 1.6 1479 chrX 19356975 intron kek5 + chrX 19357714 intron kek5 + chrX 19358454 intron kek5 + chrX_7_19355001 chrX_19355001 RAL-370 2884 chrX 19380138 19380185 chrX 19380399 19380446 pogo 10 260 2.5 3.0 2.8 2.6 308 chrX 19380138 intron kek5 + chrX 19380292 intron kek5 + chrX 19380446 intron kek5 + chrX_10_19380001 chrX_19380001 RAL-370 2885 chrX 16983076 16983077 chrX 19404963 19404964 4 2421887 8.5 8.5 8.5 0.4 2421888 chrX 16983076 intron CG45002 - chrX 18194020 intron Frq2 + chrX 19404964 intron kek5 + chrX_4_18190001 chrX_18190001 RAL-370 2886 chrX 19430541 19430564 chrX 19430659 19430682 6 118 3.0 4.0 3.5 1.3 141 chrX 19430541 intron kek5 + chrX 19430612 intron kek5 + chrX 19430682 intron kek5 + chrX_6_19430001 chrX_19430001 RAL-370 2887 chrX 19461127 19461141 chrX 19461243 19461249 5 114 7.0 4.5 5.8 0.7 122 chrX 19461127 intron kek5 + chrX 19461188 intron kek5 + chrX 19461249 intron kek5 + chrX_5_19460001 chrX_19460001 RAL-370 2888 chrX 19461147 19461170 chrX 19461239 19461286 7 110 4.5 4.5 4.5 1.3 139 chrX 19461147 intron kek5 + chrX 19461216 intron kek5 + chrX 19461286 intron kek5 + chrX_7_19460001 chrX_19460001 RAL-370 2889 chrX 19472106 19472155 chrX 19472695 19472718 jockey 7 577 3.0 5.5 4.2 1.3 612 chrX 19472106 intergenic kek5 + chrX 19472412 intergenic kek5 + chrX 19472718 intergenic not near genes chrX_7_19470001 chrX_19470001 RAL-370 2890 chrX 19500549 19500747 chrX 19500645 19500854 13 100 3.5 5.0 4.2 2.5 305 chrX 19500549 intron,intron CG14200 +,Pfrx + chrX 19500702 intron,intron CG14200 +,Pfrx + chrX 19500854 intron,intron CG14200 +,Pfrx + chrX_13_19500001 chrX_19500001 RAL-370 2891 chrX 19538901 19538951 chrX 19539003 19539054 11 101 2.5 2.0 2.2 3.4 153 chrX 19538901 intron CG32532 - chrX 19538978 intron CG32532 - chrX 19539054 intron CG32532 - chrX_11_19535001 chrX_19535001 RAL-370 2892 chrX 19576538 19576592 chrX 19576636 19576680 10 95 5.5 3.0 4.2 1.9 142 chrX 19576538 intron Tao - chrX 19576609 intron Tao - chrX 19576680 intron Tao - chrX_10_19575001 chrX_19575001 RAL-370 2893 chrX 19593928 19593977 chrX 19594033 19594078 15 103 4.5 4.5 4.5 2.7 150 chrX 19593928 exon CG14205 + chrX 19594003 intron CG14205 + chrX 19594078 intron CG14205 + chrX_15_19590001 chrX_19590001 RAL-370 2894 chrX 19595729 19595740 chrX 19595838 19595846 4 108 1.5 5.5 3.5 0.9 117 chrX 19595729 intergenic CG14205 + chrX 19595788 intergenic CG14205 + chrX 19595846 intergenic CG14205 + chrX_4_19595001 chrX_19595001 RAL-370 2895 chrX 19794296 19794317 chrX 19794391 19794414 8 96 5.5 6.5 6.0 1.1 118 chrX 19794296 intergenic not near genes chrX 19794355 intergenic not near genes chrX 19794414 intergenic not near genes chrX_8_19790001 chrX_19790001 RAL-370 2896 chrX 19821714 19821752 chrX 19821819 19821856 6 105 1.5 1.5 1.5 2.4 142 chrX 19821714 intergenic not near genes chrX 19821785 intergenic not near genes chrX 19821856 intergenic not near genes chrX_6_19820001 chrX_19820001 RAL-370 2897 chrX 19822815 19822848 chrX 19822998 19823029 8 180 3.5 4.5 4.0 1.6 214 chrX 19822815 intergenic not near genes chrX 19822922 intergenic skpE - chrX 19823029 intergenic skpE - chrX_8_19820001 chrX_19820001 RAL-370 2898 chrX 19974919 19974933 chrX 19975015 19975029 5 96 4.5 3.5 4.0 1.0 110 chrX 19974919 intergenic not near genes chrX 19974974 intergenic not near genes chrX 19975029 intergenic not near genes chrX_5_19970001 chrX_19970001 RAL-370 2899 chrX 19974943 19974966 chrX 19975014 19975060 8 92 2.0 4.0 3.0 2.0 117 chrX 19974943 intergenic not near genes chrX 19975002 intergenic not near genes chrX 19975060 intergenic not near genes chrX_8_19970001 chrX_19970001 RAL-370 2900 chrX 19983846 19983887 chrX 19983946 19983949 9 96 0.5 0.0 0.2 7.5 103 chrX 19983846 intergenic not near genes chrX 19983898 intergenic not near genes chrX 19983949 intergenic not near genes chrX_9_19980001 chrX_19980001 RAL-370 2901 chrX 19992405 19992416 chrX 19992501 19992507 4 94 4.0 9.0 6.5 0.5 102 chrX 19992405 intergenic not near genes chrX 19992456 intergenic not near genes chrX 19992507 intergenic not near genes chrX_4_19990001 chrX_19990001 RAL-370 2902 chrX 20052764 20052790 chrX 20052868 20052894 5 103 4.0 0.0 2.0 1.7 130 chrX 20052764 intron Dop2R - chrX 20052829 intron Dop2R - chrX 20052894 intron Dop2R - chrX_5_20050001 chrX_20050001 RAL-370 2903 chrX 20144293 20144314 chrX 20144392 20144414 9 99 0.0 4.0 2.0 3.0 121 chrX 20144293 intergenic not near genes chrX 20144354 intergenic not near genes chrX 20144414 intergenic not near genes chrX_9_20140001 chrX_20140001 RAL-370 2904 chrX 20144822 20144876 chrX 20145012 20145060 22 187 2.0 4.0 3.0 5.5 238 chrX 20144822 intergenic not near genes chrX 20144941 intergenic not near genes chrX 20145060 intergenic not near genes chrX_22_20140001 chrX_20140001 RAL-370 2905 chrX 20312861 20312907 chrX 20312959 20312987 18 96 6.5 4.5 5.5 2.8 126 chrX 20312861 intron CG1504 - chrX 20312924 intron CG1504 - chrX 20312987 intron CG1504 - chrX_18_20310001 chrX_20310001 RAL-370 2906 chrX 20369300 20369336 chrX 20369404 20369440 7 104 3.5 3.0 3.2 1.7 140 chrX 20369300 intergenic not near genes chrX 20369370 intergenic not near genes chrX 20369440 intergenic not near genes chrX_7_20365001 chrX_20365001 RAL-370 2907 chrX 20374073 20374124 chrX 20374169 20374206 11 87 0.0 1.0 0.5 7.3 133 chrX 20374073 intergenic not near genes chrX 20374140 intergenic not near genes chrX 20374206 intergenic not near genes chrX_11_20370001 chrX_20370001 RAL-370 2908 chrX 20377329 20377346 chrX 20378816 20378819 hobo 4 1483 4.5 5.5 5.0 0.7 1490 chrX 20377329 intergenic not near genes chrX 20378074 intergenic not near genes chrX 20378819 intergenic not near genes chrX_4_20375001 chrX_20375001 RAL-370 2909 chrX 20443165 20443201 chrX 20443261 20443296 8 96 3.0 6.0 4.5 1.5 131 chrX 20443165 exon CG1695 + chrX 20443230 intron CG1695 + chrX 20443296 intron CG1695 + chrX_8_20440001 chrX_20440001 RAL-370 2910 chrX 20468006 20468016 chrX 20468115 20468125 5 108 2.5 0.5 1.5 2.0 119 chrX 20468006 intron GstT3 + chrX 20468066 intron GstT3 + chrX 20468125 intron GstT3 + chrX_5_20465001 chrX_20465001 RAL-370 2911 chrX 20500211 20500263 chrX 20500315 20500366 14 103 1.0 3.0 2.0 4.7 155 chrX 20500211 intron RhoGAP19D - chrX 20500288 intron RhoGAP19D - chrX 20500366 intron RhoGAP19D - chrX_14_20500001 chrX_20500001 RAL-370 2912 chrX 20503157 20503199 chrX 20503273 20503316 7 114 2.0 4.5 3.2 1.7 159 chrX 20503157 intron RhoGAP19D - chrX 20503236 intron RhoGAP19D - chrX 20503316 intron RhoGAP19D - chrX_7_20500001 chrX_20500001 RAL-370 2913 chrX 20504114 20504154 chrX 20505655 20505669 transib2 8 1536 3.5 6.5 5.0 1.3 1555 chrX 20504114 intron RhoGAP19D - chrX 20504892 intron RhoGAP19D - chrX 20505669 intron RhoGAP19D - chrX_8_20500001 chrX_20500001 RAL-370 2914 chrX 20526458 20526473 chrX 20526594 20526609 5 136 0.5 0.0 0.2 4.2 151 chrX 20526458 intergenic not near genes chrX 20526534 intergenic not near genes chrX 20526609 intergenic not near genes chrX_5_20525001 chrX_20525001 RAL-370 2915 chrX 20528592 20528615 chrX 20528954 20528983 5 367 6.0 4.5 5.2 0.8 391 chrX 20528592 intergenic not near genes chrX 20528788 intergenic not near genes chrX 20528983 intergenic not near genes chrX_5_20525001 chrX_20525001 RAL-370 2916 chrX 20531741 20531795 chrX 20531860 20531876 10 115 1.5 1.0 1.2 4.5 135 chrX 20531741 intergenic not near genes chrX 20531808 intergenic not near genes chrX 20531876 intergenic not near genes chrX_10_20530001 chrX_20530001 RAL-370 2917 chrX 20539463 20539508 chrX 20539821 20539866 10 349 2.5 1.5 2.0 3.3 403 chrX 20539463 intron RunxB + chrX 20539664 intron RunxB + chrX 20539866 intron RunxB + chrX_10_20535001 chrX_20535001 RAL-370 2918 chrX 20541330 20541337 chrX 20541460 20541480 4 140 0.0 0.0 0.0 4.0 150 chrX 20541330 intron RunxB + chrX 20541405 intron RunxB + chrX 20541480 intron RunxB + chrX_4_20540001 chrX_20540001 RAL-370 2919 chrX 20546532 20546566 chrX 20546718 20546752 6 186 4.0 0.0 2.0 2.0 220 chrX 20546532 intron RunxB + chrX 20546642 intron RunxB + chrX 20546752 intron RunxB + chrX_6_20545001 chrX_20545001 RAL-370 2920 chrX 20578060 20578109 chrX 20578159 20578208 10 95 2.0 2.0 2.0 3.3 148 chrX 20578060 intergenic not near genes chrX 20578134 intergenic not near genes chrX 20578208 intergenic not near genes chrX_10_20575001 chrX_20575001 RAL-370 2921 chrX 20594291 20594314 chrX 20594396 20594420 4 105 4.5 3.0 3.8 0.8 129 chrX 20594291 intron RunxA - chrX 20594356 intron RunxA - chrX 20594420 intron RunxA - chrX_4_20590001 chrX_20590001 RAL-370 2922 chrX 20594321 20594332 chrX 20594389 20594438 4 96 2.5 2.5 2.5 1.1 117 chrX 20594321 intron RunxA - chrX 20594380 intron RunxA - chrX 20594438 intron RunxA - chrX_4_20590001 chrX_20590001 RAL-370 2923 chrX 20634421 20634454 chrX 20634515 20634559 5 92 3.5 2.0 2.8 1.3 138 chrX 20634421 intergenic not near genes chrX 20634490 intergenic not near genes chrX 20634559 intergenic not near genes chrX_5_20630001 chrX_20630001 RAL-370 2924 chrX 20635416 20635440 chrX 20635602 20635626 5 186 1.0 4.0 2.5 1.4 210 chrX 20635416 intergenic not near genes chrX 20635521 intergenic not near genes chrX 20635626 intergenic not near genes chrX_5_20635001 chrX_20635001 RAL-370 2925 chrX 20662297 20662343 chrX 20662400 20662442 10 99 3.0 0.0 1.5 4.0 145 chrX 20662297 intron CG1835 + chrX 20662370 intron CG1835 + chrX 20662442 intron CG1835 + chrX_10_20660001 chrX_20660001 RAL-370 2926 chrX 20710420 20710440 chrX 20710517 20710537 6 97 1.5 0.5 1.0 3.0 117 chrX 20710420 intergenic not near genes chrX 20710478 intergenic not near genes chrX 20710537 intergenic not near genes chrX_6_20710001 chrX_20710001 RAL-370 2927 chrX 20836707 20836742 chrX 20844329 20844364 roo 7 7622 1.5 0.5 1.0 3.5 7657 chrX 20836707 intron shakB - chrX 20840536 intron shakB - chrX 20844364 intron shakB - chrX_7_20840001 chrX_20840001 RAL-370 2928 chrX 20900283 20900294 chrX 20900382 20900390 5 100 2.5 3.5 3.0 1.2 107 chrX 20900283 intron shakB - chrX 20900336 intron shakB - chrX 20900390 intron shakB - chrX_5_20900001 chrX_20900001 RAL-370 2929 chrX 20915029 20915070 chrX 20915220 20915261 5 191 2.0 2.5 2.2 1.6 232 chrX 20915029 intron shakB - chrX 20915145 intron shakB - chrX 20915261 intron shakB - chrX_5_20915001 chrX_20915001 RAL-370 2930 chrX 20940709 20940747 chrX 20942194 20942228 hobo 10 1488 3.0 4.0 3.5 2.2 1519 chrX 20940709 intergenic not near genes chrX 20941468 intergenic not near genes chrX 20942228 intergenic not near genes chrX_10_20940001 chrX_20940001 RAL-370 2931 chrX 21055679 21055723 chrX 21055766 21055819 11 88 1.5 2.5 2.0 3.7 140 chrX 21055679 intron bves + chrX 21055749 intron bves + chrX 21055819 intron bves + chrX_11_21055001 chrX_21055001 RAL-370 2932 chrX 21076310 21076357 chrX 21076409 21076456 7 93 3.0 0.0 1.5 2.8 146 chrX 21076310 intron bves + chrX 21076383 intron bves + chrX 21076456 intron bves + chrX_7_21075001 chrX_21075001 RAL-370 2933 chrX 21077593 21077630 chrX 21077689 21077691 5 97 2.5 1.5 2.0 1.7 98 chrX 21077593 intron bves + chrX 21077642 intron bves + chrX 21077691 intron bves + chrX_5_21075001 chrX_21075001 RAL-370 2934 chrX 21078755 21078776 chrX 21078850 21078874 6 96 2.0 1.5 1.8 2.1 119 chrX 21078755 intron bves + chrX 21078814 intron bves + chrX 21078874 intron bves + chrX_6_21075001 chrX_21075001 RAL-370 2935 chrX 20144555 20144579 chrX 21085248 21085289 5 940704 16.0 21.0 18.5 0.3 940734 chrX 20144555 intergenic not near genes chrX 20614922 intron RunxA - chrX 21085289 intergenic not near genes chrX_5_20610001 chrX_20610001 RAL-370 2936 chrX 21086124 21086156 chrX 21087173 21087200 jockey 8 1047 5.0 5.5 5.2 1.3 1076 chrX 21086124 intergenic not near genes chrX 21086662 intergenic not near genes chrX 21087200 intergenic not near genes chrX_8_21085001 chrX_21085001 RAL-370 2937 chrX 21088024 21088074 chrX 21088174 21088224 10 148 1.0 1.5 1.2 4.5 200 chrX 21088024 intergenic not near genes chrX 21088124 intergenic not near genes chrX 21088224 intergenic not near genes chrX_10_21085001 chrX_21085001 RAL-370 2938 chrX 21190562 21190820 chrX 21190738 21190900 6 133 0.5 0.0 0.2 5.0 338 chrX 21190562 intergenic not near genes chrX 21190731 intergenic not near genes chrX 21190900 intergenic not near genes chrX_6_21190001 chrX_21190001 RAL-370 2939 chrX 21197061 21197090 chrX 21197142 21197187 6 95 5.0 7.5 6.2 0.8 126 chrX 21197061 intergenic not near genes chrX 21197124 intergenic not near genes chrX 21197187 intergenic not near genes chrX_6_21195001 chrX_21195001 RAL-370 2940 chrX 21253280 21253291 chrX 21253364 21253384 5 91 5.0 3.0 4.0 1.0 104 chrX 21253280 intron CG32521 - chrX 21253332 intron CG32521 - chrX 21253384 intron CG32521 - chrX_5_21250001 chrX_21250001 RAL-370 2941 chrX 21254710 21254721 chrX 21255316 21255327 hopper2 6 606 4.5 4.5 4.5 1.1 617 chrX 21254710 intron CG32521 - chrX 21255018 intron CG32521 - chrX 21255327 intron CG32521 - chrX_6_21255001 chrX_21255001 RAL-370 2942 chrX 21254723 21254730 chrX 21255308 21255335 hopper2 4 596 3.0 4.5 3.8 0.8 612 chrX 21254723 intron CG32521 - chrX 21255029 intron CG32521 - chrX 21255335 intron CG32521 - chrX_4_21255001 chrX_21255001 RAL-370 2943 chrX 21258819 21258852 chrX 21258938 21258971 10 118 2.5 3.5 3.0 2.5 152 chrX 21258819 intron CG32521 - chrX 21258895 intron CG32521 - chrX 21258971 intron CG32521 - chrX_10_21255001 chrX_21255001 RAL-370 2944 chrX 21308874 21308922 chrX 21308977 21309045 10 110 3.0 0.0 1.5 4.0 171 chrX 21308874 exon CG1801 - chrX 21308960 intron CG1801 - chrX 21309045 intron CG1801 - chrX_10_21305001 chrX_21305001 RAL-370 2945 chrX 21311659 21311676 chrX 21311780 21311796 6 120 1.0 0.5 0.8 3.3 137 chrX 21311659 intron CG1801 - chrX 21311728 intron CG1801 - chrX 21311796 intron CG1801 - chrX_6_21310001 chrX_21310001 RAL-370 2946 chrX 21312748 21312778 chrX 21312894 21312924 4 144 3.0 0.5 1.8 1.4 176 chrX 21312748 exon CG1801 - chrX 21312836 intron CG1801 - chrX 21312924 intron CG1801 - chrX_4_21310001 chrX_21310001 RAL-370 2947 chrX 21398865 21398908 chrX 21398962 21399004 7 97 4.0 6.0 5.0 1.2 139 chrX 21398865 intergenic not near genes chrX 21398934 intergenic not near genes chrX 21399004 intergenic not near genes chrX_7_21395001 chrX_21395001 RAL-370 2948 chrX 21400607 21400642 chrX 21400704 21400740 7 97 4.0 3.5 3.8 1.5 133 chrX 21400607 3` UTR CR45500 - chrX 21400674 3` UTR CR45500 - chrX 21400740 3` UTR CR45500 - chrX_7_21400001 chrX_21400001 RAL-370 2949 chrX 21419193 21419241 chrX 21419298 21419343 7 104 1.5 2.0 1.8 2.5 150 chrX 21419193 intergenic not near genes chrX 21419268 intergenic not near genes chrX 21419343 intergenic not near genes chrX_7_21415001 chrX_21415001 RAL-370 2950 chrX 21443442 21443484 chrX 21443639 21443682 14 198 3.0 3.0 3.0 3.5 240 chrX 21443442 intron CG42343 - chrX 21443562 intron CG42343 - chrX 21443682 intron CG42343 - chrX_14_21440001 chrX_21440001 RAL-370 2951 chrX 21455202 21455233 chrX 21455401 21455440 5 205 1.0 0.0 0.5 3.3 238 chrX 21455202 intron CG42343 - chrX 21455321 intron CG42343 - chrX 21455440 intron CG42343 - chrX_5_21455001 chrX_21455001 RAL-370 2952 chrX 21458669 21458724 chrX 21464125 21464180 Ivk 14 5455 4.0 5.0 4.5 2.5 5511 chrX 21458669 intergenic not near genes chrX 21461424 intergenic not near genes chrX 21464180 intergenic not near genes chrX_14_21460001 chrX_21460001 RAL-370 2953 chrX 21474389 21474432 chrX 21474775 21474816 1731 12 385 4.0 5.0 4.5 2.2 427 chrX 21474389 intergenic not near genes chrX 21474602 intergenic not near genes chrX 21474816 intergenic not near genes chrX_12_21470001 chrX_21470001 RAL-370 2954 chrX 21565400 21565435 chrX 21565496 21565533 10 97 3.5 4.5 4.0 2.0 133 chrX 21565400 intergenic not near genes chrX 21565466 intergenic not near genes chrX 21565533 intergenic not near genes chrX_10_21565001 chrX_21565001 RAL-370 2955 chrX 21668252 21668287 chrX 21668356 21668392 8 104 22.0 19.0 20.5 0.4 140 chrX 21668252 intergenic not near genes chrX 21668322 intergenic not near genes chrX 21668392 intergenic not near genes chrX_8_21665001 chrX_21665001 RAL-370 2956 chrX 22259783 22259797 chrX 22260224 22260227 rover 8 439 75.5 13.0 44.2 0.2 444 chrX 22259783 intergenic not near genes chrX 22260005 intergenic not near genes chrX 22260227 intergenic not near genes chrX_8_22260001 chrX_22260001 RAL-370 2957 chrX 22448255 22448295 chrX 22448414 22448454 10 158 1.5 3.0 2.2 3.1 199 chrX 22448255 intron CG14615 - chrX 22448354 intron CG14615 - chrX 22448454 intron CG14615 - chrX_10_22445001 chrX_22445001 RAL-370 2958 chrX 22478875 22478896 chrX 22479028 22479049 15 153 0.0 1.0 0.5 10.0 174 chrX 22478875 intron CG12576 - chrX 22478962 intron CG12576 - chrX 22479049 intron CG12576 - chrX_15_22475001 chrX_22475001 RAL-370 2959 chrX 22522609 22522644 chrX 22525449 22525484 NOF 6 2839 1.0 1.0 1.0 3.0 2875 chrX 22522609 intron CG17600 + chrX 22524046 intron CG17600 + chrX 22525484 intron CG17600 + chrX_6_22520001 chrX_22520001 RAL-370 2960 chrX 22526888 22526914 chrX 22526986 22527015 6 98 6.0 8.0 7.0 0.8 127 chrX 22526888 intron CG17600 + chrX 22526952 intron CG17600 + chrX 22527015 intron CG17600 + chrX_6_22525001 chrX_22525001 RAL-370 2961 chrX 22564558 22564585 chrX 22575110 22575139 jockey 8 10553 17.5 14.0 15.8 0.5 10581 chrX 22564558 intergenic not near genes chrX 22569848 intergenic not near genes chrX 22575139 intergenic not near genes chrX_8_22565001 chrX_22565001 RAL-370 2962 chrX 22585504 22585529 chrX 22585607 22585632 4 103 4.0 3.0 3.5 0.9 128 chrX 22585504 intron Cda4 - chrX 22585568 intron Cda4 - chrX 22585632 intron Cda4 - chrX_4_22585001 chrX_22585001 RAL-370 2963 chrX 22660560 22660566 chrX 22660664 22660670 4 103 7.5 0.0 3.8 0.8 110 chrX 22660560 intron CR44997 + chrX 22660615 intron CR44997 + chrX 22660670 intron CR44997 + chrX_4_22660001 chrX_22660001 RAL-370 2964 chrX 22665776 22665828 chrX 22665875 22665925 17 98 2.0 1.0 1.5 6.8 149 chrX 22665776 intron CR44997 + chrX 22665850 intron CR44997 + chrX 22665925 intron CR44997 + chrX_17_22665001 chrX_22665001 RAL-370 2965 chrX 22697478 22697512 chrX 22701795 22701829 Juan 8 4317 4.5 8.5 6.5 1.1 4351 chrX 22697478 intron CR44997 + chrX 22699654 intron CR44997 + chrX 22701829 intron CR44997 + chrX_8_22695001 chrX_22695001 RAL-370 2966 chrX 22734442 22734449 chrX 22734540 22734548 4 99 1.0 2.5 1.8 1.4 106 chrX 22734442 intron CR44997 + chrX 22734495 intron CR44997 + chrX 22734548 intron CR44997 + chrX_4_22730001 chrX_22730001 RAL-370 2967 chrX 22771486 22771528 chrX 22774797 22774838 297 8 3309 3.5 3.5 3.5 1.8 3352 chrX 22771486 intron CR44997 + chrX 22773162 intron CR44997 + chrX 22774838 intron CR44997 + chrX_8_22770001 chrX_22770001 RAL-370 2968 chrX 22784057 22784105 chrX 22784160 22784205 15 100 3.0 1.0 2.0 5.0 148 chrX 22784057 intron CR44997 + chrX 22784131 intron CR44997 + chrX 22784205 intron CR44997 + chrX_15_22780001 chrX_22780001 RAL-370 2969 chrX 22797014 22797025 chrX 22797118 22797130 6 104 0.0 8.0 4.0 1.2 116 chrX 22797014 intron CR44997 + chrX 22797072 intron CR44997 + chrX 22797130 intron CR44997 + chrX_6_22795001 chrX_22795001 RAL-370 2970 chrX 22811977 22812002 chrX 22816769 22816794 F-element 8 4792 11.5 4.5 8.0 0.9 4817 chrX 22811977 intergenic CG12446 - chrX 22814386 intergenic not near genes chrX 22816794 intergenic not near genes chrX_8_22810001 chrX_22810001 RAL-370 2971 chrX 22824221 22824432 chrX 22824366 22824585 8 147 0.5 1.0 0.8 4.4 364 chrX 22824221 intergenic fog - chrX 22824403 3` UTR fog - chrX 22824585 3` UTR fog - chrX_8_22820001 chrX_22820001 RAL-370 2972 chrX 22867962 22868009 chrX 22868091 22868148 12 128 4.0 0.0 2.0 4.0 186 chrX 22867962 exon CG42346 + chrX 22868055 intron CG42346 + chrX 22868148 intron CG42346 + chrX_12_22865001 chrX_22865001 RAL-370 2973 chrX 22870877 22870884 chrX 22870974 22870992 5 106 3.0 4.0 3.5 1.1 115 chrX 22870877 intron,3` UTR CG42346 +,CR43656 - chrX 22870934 intron,3` UTR CG42346 +,CR43656 - chrX 22870992 intron,3` UTR CG42346 +,CR43656 - chrX_5_22870001 chrX_22870001 RAL-370 2974 chrX 22870885 22870899 chrX 22870966 22870970 4 93 1.0 3.5 2.2 1.2 85 chrX 22870885 intron,3` UTR CG42346 +,CR43656 - chrX 22870928 intron,3` UTR CG42346 +,CR43656 - chrX 22870970 intron,3` UTR CG42346 +,CR43656 - chrX_4_22870001 chrX_22870001 RAL-370 2975 chrX 22895718 22895759 chrX 22895850 22895870 8 126 2.0 2.5 2.2 2.5 152 chrX 22895718 intergenic not near genes chrX 22895794 intergenic not near genes chrX 22895870 intergenic not near genes chrX_8_22895001 chrX_22895001 RAL-370 2976 chrX 22982819 22982867 chrX 22983022 22983069 13 201 5.0 2.5 3.8 2.7 250 chrX 22982819 3` UTR,exon stnA -,stnB - chrX 22982944 intron,intron stnA -,stnB - chrX 22983069 intron,intron stnA -,stnB - chrX_13_22980001 chrX_22980001 RAL-370 2977 chrX 22987091 22987131 chrX 22989770 22989810 Burdock 9 2678 1.5 3.0 2.2 2.8 2719 chrX 22987091 intron,intron stnA -,stnB - chrX 22988450 intron,intron stnA -,stnB - chrX 22989810 intron,intron stnA -,stnB - chrX_9_22985001 chrX_22985001 RAL-370 2978 chrX 22996292 22996334 chrX 23003546 23003588 roo 14 7250 4.0 3.0 3.5 3.1 7296 chrX 22996292 intron,intron stnA -,stnB - chrX 22999940 intron,intron stnA -,stnB - chrX 23003588 intron,intron stnA -,stnB - chrX_14_22995001 chrX_22995001 RAL-370