SV# Chr Chr_coord_5p Chr_coord_3p TE TE_coord_start TE_coord_end Reads_collapsed Chr_Coord_Dist Symmetry avg_blat_score Norm_RefGen_Reads Coverage_Ratio classification comments insert_code loci_code Sym_score libname 1 chr2L 207029 207063 P-element 13 2861 5 34 '2-3 40.17 5.3 0.8 intron CG11617 - chr2L_5_205001 chr2L_205001 0.40 RAL-367 2 chr2L 357173 357242 1360 7 3387 17 69 '11-6 66.19 7.5 2.0 exon Ent1 - chr2L_17_355001 chr2L_355001 0.65 RAL-367 3 chr2L 661824 661899 roo 406 8667 16 75 '6-10 68.69 4.0 3.2 intron ds - chr2L_16_660001 chr2L_660001 0.38 RAL-367 4 chr2L 1063470 1063534 FB 5 8 6 64 '5-1 64.49 5.2 1.0 intron S - chr2L_6_1060001 chr2L_1060001 0.83 RAL-367 5 chr2L 1089550 1089627 hopper 1412 1 6 77 '3-3 67.19 3.4 1.4 intron CG4629 - chr2L_6_1085001 chr2L_1085001 0.50 RAL-367 6 chr2L 1733567 1733617 blood 7041 7389 17 50 '6-11 64.27 2.7 4.6 intron CG17646 + chr2L_17_1730001 chr2L_1730001 0.35 RAL-367 7 chr2L 2004933 2004967 jockey 4668 4702 12 34 '4-8 68.35 6.3 1.6 intron CG33543 - chr2L_12_2000001 chr2L_2000001 0.33 RAL-367 8 chr2L 2079333 2079397 Transpac 5211 4921 5 64 '4-1 71.33 2.4 1.5 intron dpr3 - chr2L_5_2075001 chr2L_2075001 0.80 RAL-367 9 chr2L 2653911 2653962 Transpac 26 5224 8 51 '1-7 62.33 0.2 6.7 3` UTR Prosbeta4R1 + chr2L_8_2650001 chr2L_2650001 0.12 RAL-367 10 chr2L 3116936 3117016 roo 410 8666 12 80 '6-6 65.06 3.9 2.4 intron toc - chr2L_12_3115001 chr2L_3115001 0.50 RAL-367 11 chr2L 3662289 3662368 Transpac 307 4919 19 79 '10-9 63.86 2.1 6.1 intergenic CG34340 + chr2L_19_3660001 chr2L_3660001 0.53 RAL-367 12 chr2L 4345862 4345932 jockey 4998 4666 10 70 '3-7 59.31 2.7 2.7 intergenic Atet + chr2L_10_4345001 chr2L_4345001 0.30 RAL-367 13 chr2L 4531089 4531161 pogo 2 2091 11 72 '9-2 66.24 2.1 3.5 intron dp - chr2L_11_4530001 chr2L_4530001 0.82 RAL-367 14 chr2L 4718163 4718245 Transpac 309 4918 17 82 '5-12 69.60 6.0 2.4 intron CG34351 + chr2L_17_4715001 chr2L_4715001 0.29 RAL-367 15 chr2L 5635372 5635401 jockey 7 36 8 29 '3-5 63.97 6.3 1.1 intron CG31646 - chr2L_8_5635001 chr2L_5635001 0.38 RAL-367 16 chr2L 5702563 5702637 opus 7494 112 9 74 '5-4 65.38 3.1 2.2 intergenic not near genes chr2L_9_5700001 chr2L_5700001 0.56 RAL-367 17 chr2L 5809625 5809701 roo 3 9070 13 76 '9-4 64.79 2.3 3.9 intergenic CR44575 + chr2L_13_5805001 chr2L_5805001 0.69 RAL-367 18 chr2L 5810193 5810246 jockey 11 4976 10 53 '9-1 59.48 4.9 1.7 5` UTR CR44575 + chr2L_10_5810001 chr2L_5810001 0.90 RAL-367 19 chr2L 6340455 6340511 Juan 4199 3 8 56 '1-7 60.50 1.5 3.2 intron Cpr + chr2L_8_6340001 chr2L_6340001 0.12 RAL-367 20 chr2L 6593089 6593119 F-element 10 40 7 30 '4-3 61.45 5.4 1.1 intron CG11319 - chr2L_7_6590001 chr2L_6590001 0.57 RAL-367 21 chr2L 6712033 6712079 hobo 2909 1 6 46 '3-3 63.18 1.3 2.6 intron AkhR - chr2L_6_6710001 chr2L_6710001 0.50 RAL-367 22 chr2L 6885094 6885168 roo 405 8667 15 74 '11-4 64.42 3.2 3.6 intron Nlg2 + chr2L_15_6885001 chr2L_6885001 0.73 RAL-367 23 chr2L 6890524 6890611 297 6972 2 8 87 '5-3 61.67 1.2 3.6 intron Nlg2 + chr2L_8_6890001 chr2L_6890001 0.62 RAL-367 24 chr2L 7401857 7401884 X-element 4686 12 5 27 '3-2 56.27 2.7 1.4 intron CG5171 + chr2L_5_7400001 chr2L_7400001 0.60 RAL-367 25 chr2L 7537524 7537590 FB 8 2 11 66 '5-6 64.31 4.6 2.0 intron RapGAP1 - chr2L_11_7535001 chr2L_7535001 0.45 RAL-367 26 chr2L 7919251 7919332 roo 409 8664 12 81 '3-9 68.33 3.3 2.8 intron Snoo - chr2L_12_7915001 chr2L_7915001 0.25 RAL-367 27 chr2L 7926951 7927021 hopper 1410 1409 11 70 '4-7 65.60 4.2 2.1 intron Snoo - chr2L_11_7925001 chr2L_7925001 0.36 RAL-367 28 chr2L 8993954 8994029 pogo 2099 7 8 75 '3-5 64.84 2.1 2.6 3` UTR alien - chr2L_8_8990001 chr2L_8990001 0.38 RAL-367 29 chr2L 9616797 9616814 P-element 29 2880 8 17 '3-5 44.81 3.4 1.8 intron GlcAT-S + chr2L_8_9615001 chr2L_9615001 0.38 RAL-367 30 chr2L 9874179 9874254 hobo 1 2937 11 75 '9-2 57.21 4.6 2.0 intron nAChRalpha6 - chr2L_11_9870001 chr2L_9870001 0.82 RAL-367 31 chr2L 9907895 9907965 Tirant 386 8108 14 70 '4-10 68.32 3.1 3.4 intron CG13124 - chr2L_14_9905001 chr2L_9905001 0.29 RAL-367 32 chr2L 10135770 10135795 hobo 2908 2933 5 25 '3-2 71.53 5.6 0.8 intron CG44153 - chr2L_5_10135001 chr2L_10135001 0.60 RAL-367 33 chr2L 11318818 11318838 297 395 375 5 20 '2-3 68.80 7.0 0.6 intergenic CR44583 + chr2L_5_11315001 chr2L_11315001 0.40 RAL-367 34 chr2L 11528344 11528370 pogo 4 30 5 26 '3-2 67.73 2.4 1.5 intergenic CG31705 - chr2L_5_11525001 chr2L_11525001 0.60 RAL-367 35 chr2L 11712505 11712532 jockey 4789 4762 9 27 '4-5 61.63 5.1 1.5 intergenic not near genes chr2L_9_11710001 chr2L_11710001 0.44 RAL-367 36 chr2L 11726170 11726219 jockey 4973 7 8 49 '2-6 64.53 5.0 1.3 intergenic not near genes chr2L_8_11725001 chr2L_11725001 0.25 RAL-367 37 chr2L 12419730 12419781 roo 19 398 6 51 '2-4 68.00 1.8 2.1 intron vir-1 - chr2L_6_12415001 chr2L_12415001 0.33 RAL-367 38 chr2L 12842739 12842821 blood 7009 7389 9 82 '6-3 65.29 3.1 2.2 intergenic not near genes chr2L_9_12840001 chr2L_12840001 0.67 RAL-367 39 chr2L 13061646 13061719 roo 407 8670 9 73 '6-3 64.28 1.9 3.1 intergenic not near genes chr2L_9_13060001 chr2L_13060001 0.67 RAL-367 40 chr2L 13154640 13154666 copia 4869 26 5 26 '4-1 70.23 6.4 0.7 intergenic not near genes chr2L_5_13150001 chr2L_13150001 0.80 RAL-367 41 chr2L 13446211 13446290 S-element 1713 1714 9 79 '7-2 64.48 4.1 1.8 intron CG42784 + chr2L_9_13445001 chr2L_13445001 0.78 RAL-367 42 chr2L 13568148 13568174 Ivk 2 29 11 26 '6-5 58.39 7.3 1.3 intron kuz + chr2L_11_13565001 chr2L_13565001 0.55 RAL-367 43 chr2L 13686215 13686287 hopper 3 5 5 72 '2-3 61.58 3.3 1.2 intron CG31814 - chr2L_5_13685001 chr2L_13685001 0.40 RAL-367 44 chr2L 13738738 13738823 opus 110 498 8 85 '5-3 73.57 2.2 2.5 intergenic not near genes chr2L_8_13735001 chr2L_13735001 0.62 RAL-367 45 chr2L 14885824 14885929 hobo 4 2933 7 105 '2-5 59.54 2.6 1.9 intergenic CR45302 + chr2L_7_14885001 chr2L_14885001 0.29 RAL-367 46 chr2L 15228767 15228839 mdg1 7044 418 11 72 '2-9 62.81 1.3 4.8 3` UTR ZnT35C - chr2L_11_15225001 chr2L_15225001 0.18 RAL-367 47 chr2L 15823690 15823762 HMS-Beagle 7036 6800 10 72 '1-9 66.87 3.9 2.0 intergenic not near genes chr2L_10_15820001 chr2L_15820001 0.10 RAL-367 48 chr2L 16014734 16014792 hobo 2938 19 10 58 '7-3 64.70 5.4 1.6 intron beat-Ic + chr2L_10_16010001 chr2L_16010001 0.70 RAL-367 49 chr2L 16342179 16342239 roo 8663 387 17 60 '10-7 69.43 4.9 2.9 exon CG44405 - chr2L_17_16340001 chr2L_16340001 0.59 RAL-367 50 chr2L 17008628 17008689 X-element 7 4711 11 61 '8-3 63.64 2.5 3.1 intergenic not near genes chr2L_11_17005001 chr2L_17005001 0.73 RAL-367 51 chr2L 17095449 17095518 hopper 1408 5 10 69 '3-7 64.53 3.7 2.1 intergenic not near genes chr2L_10_17095001 chr2L_17095001 0.30 RAL-367 52 chr2L 17183916 17183994 hobo 2708 3 6 78 '1-5 67.20 3.0 1.5 intergenic CG31750 + chr2L_6_17180001 chr2L_17180001 0.17 RAL-367 53 chr2L 17285443 17285510 HMS-Beagle 238 6803 9 67 '4-5 66.51 1.3 3.9 intergenic not near genes chr2L_9_17285001 chr2L_17285001 0.44 RAL-367 54 chr2L 17354109 17354188 Max-element 8233 298 11 79 '8-3 62.64 2.6 3.1 3` UTR CR43239 - chr2L_11_17350001 chr2L_17350001 0.73 RAL-367 55 chr2L 17367344 17367427 roo 8661 409 11 83 '5-6 71.10 3.4 2.5 intergenic Lrch - chr2L_11_17365001 chr2L_17365001 0.45 RAL-367 56 chr2L 17572479 17572544 hobo 6 2937 10 65 '4-6 61.71 2.6 2.8 intergenic not near genes chr2L_10_17570001 chr2L_17570001 0.40 RAL-367 57 chr2L 17730437 17730510 pogo 2097 2 13 73 '6-7 65.35 5.0 2.2 intron CadN - chr2L_13_17730001 chr2L_17730001 0.46 RAL-367 58 chr2L 17781160 17781184 I-element 6 29 6 24 '2-4 63.72 2.9 1.5 intergenic not near genes chr2L_6_17780001 chr2L_17780001 0.33 RAL-367 59 chr2L 17812994 17813039 hobo 17 2923 9 45 '4-5 63.44 2.6 2.5 intron CadN2 - chr2L_9_17810001 chr2L_17810001 0.44 RAL-367 60 chr2L 17841032 17841082 Juan 4026 4074 4 50 '2-2 56.24 1.2 1.8 intron CadN2 - chr2L_4_17840001 chr2L_17840001 0.50 RAL-367 61 chr2L 18570495 18570553 FB 16 3 7 58 '4-3 66.43 3.1 1.7 intron Pde11 - chr2L_7_18570001 chr2L_18570001 0.57 RAL-367 62 chr2L 18758267 18758350 roo 8664 411 15 83 '4-11 64.32 2.3 4.5 intergenic not near genes chr2L_15_18755001 chr2L_18755001 0.27 RAL-367 63 chr2L 18998139 18998194 412 486 6 4 55 '2-2 59.66 0.8 2.2 exon CG31792 + chr2L_4_18995001 chr2L_18995001 0.50 RAL-367 64 chr2L 19086840 19086909 hopper 1410 1408 6 69 '3-3 63.40 2.1 1.9 intron Lim3 - chr2L_6_19085001 chr2L_19085001 0.50 RAL-367 65 chr2L 19595560 19595587 jockey 8 35 8 27 '3-5 62.93 5.4 1.2 intron Lar + chr2L_8_19595001 chr2L_19595001 0.38 RAL-367 66 chr2L 19736770 19736799 412 2 31 7 29 '3-4 67.81 7.5 0.8 3` UTR Nf-YB + chr2L_7_19735001 chr2L_19735001 0.43 RAL-367 67 chr2L 19810366 19810395 hobo 2937 2929 7 29 '4-3 62.92 4.0 1.4 intron sick + chr2L_7_19810001 chr2L_19810001 0.57 RAL-367 68 chr2L 19811275 19811296 hobo 13 1 7 21 '3-4 61.59 1.7 2.6 intron sick + chr2L_7_19810001 chr2L_19810001 0.43 RAL-367 69 chr2L 19922997 19923024 roo 9045 409 7 27 '4-3 65.72 1.8 2.5 intron,5` UTR sick +,CR43827 + chr2L_7_19920001 chr2L_19920001 0.57 RAL-367 70 chr2L 20367304 20367332 I-element 29 1 9 28 '5-4 61.60 0.3 6.9 intergenic not near genes chr2L_9_20365001 chr2L_20365001 0.56 RAL-367 71 chr2L 20367346 20367373 Doc 29 2 7 27 '3-4 61.32 3.9 1.4 intergenic not near genes chr2L_7_20365001 chr2L_20365001 0.43 RAL-367 72 chr2L 20616374 20616450 Tirant 10 401 14 76 '5-9 65.09 3.3 3.3 intron CR44909 - chr2L_14_20615001 chr2L_20615001 0.36 RAL-367 73 chr2L 20718900 20718921 jockey 4675 4696 10 21 '4-6 59.45 4.8 1.7 intergenic not near genes chr2L_10_20715001 chr2L_20715001 0.40 RAL-367 74 chr2L 20961507 20961579 roo 8663 399 8 72 '4-4 65.36 3.5 1.8 intergenic not near genes chr2L_8_20960001 chr2L_20960001 0.50 RAL-367 75 chr2L 21276700 21276773 1360 2 3386 15 73 '6-9 69.22 4.5 2.7 intron CG8671 + chr2L_15_21275001 chr2L_21275001 0.40 RAL-367 76 chr2L 21672806 21672884 S-element 1712 2 7 78 '4-3 66.29 3.4 1.6 intron CG2225 - chr2L_7_21670001 chr2L_21670001 0.57 RAL-367 77 chr2L 22015141 22015213 flea 4766 255 13 72 '5-8 66.67 2.5 3.7 intergenic CG31693 + chr2L_13_22015001 chr2L_22015001 0.38 RAL-367 78 chr2L 22209288 22209344 opus 471 112 6 56 '1-5 65.04 5.3 1.0 intron Ir40a - chr2L_6_22205001 chr2L_22205001 0.17 RAL-367 79 chr2L 22340317 22340393 HMS-Beagle2 6890 7196 11 76 '4-7 66.25 3.2 2.6 intron CG17018 + chr2L_11_22340001 chr2L_22340001 0.36 RAL-367 80 chr2L 22497637 22497774 1360 23 106 13 137 '12-1 76.24 0.0 13.0 intergenic not near genes chr2L_13_22495001 chr2L_22495001 0.92 RAL-367 81 chr2L 23295817 23295863 micropia 456 5 7 46 '2-5 60.06 3.3 1.6 intergenic not near genes chr2L_7_23295001 chr2L_23295001 0.29 RAL-367 82 chr2L 23299980 23299997 invader4 321 332 5 17 '3-2 56.24 5.6 0.8 intergenic not near genes chr2L_5_23295001 chr2L_23295001 0.60 RAL-367 83 chr2R 544795 544874 HMS-Beagle 1 246 8 79 '4-4 63.43 2.9 2.1 intron CG40378 + chr2R_8_540001 chr2R_540001 0.50 RAL-367 84 chr2R 1393749 1393823 opus 112 489 9 74 '7-2 67.60 2.3 2.7 intron l(2)41Ab + chr2R_9_1390001 chr2R_1390001 0.78 RAL-367 85 chr2R 5178590 5178672 mdg3 251 5256 11 82 '7-4 60.10 1.9 3.8 exon Nipped-A - chr2R_11_5175001 chr2R_5175001 0.64 RAL-367 86 chr2R 5262578 5262655 1360 1 1 25 77 '14-11 69.94 3.3 5.8 intron d4 + chr2R_25_5260001 chr2R_5260001 0.56 RAL-367 87 chr2R 5485070 5485122 1360 9 3371 10 52 '9-1 68.67 3.0 2.5 intron CG30440 - chr2R_10_5485001 chr2R_5485001 0.90 RAL-367 88 chr2R 5674713 5674731 S-element 1714 4 4 18 '2-2 68.48 1.8 1.4 intergenic not near genes chr2R_4_5670001 chr2R_5670001 0.50 RAL-367 89 chr2R 5820513 5820559 hopper 14 16 10 46 '3-7 63.01 3.3 2.3 intron dpr12 + chr2R_10_5820001 chr2R_5820001 0.30 RAL-367 90 chr2R 5850968 5851042 297 6587 6973 6 74 '2-4 73.94 0.5 4.0 intron dpr12 + chr2R_6_5850001 chr2R_5850001 0.33 RAL-367 91 chr2R 5941133 5941189 3S18 6090 5772 5 56 '2-3 60.33 4.4 0.9 intergenic not near genes chr2R_5_5940001 chr2R_5940001 0.40 RAL-367 92 chr2R 6156325 6156369 P-element 2883 2857 5 44 '2-3 43.20 2.0 1.7 intron EcR - chr2R_5_6155001 chr2R_6155001 0.40 RAL-367 93 chr2R 6241832 6241904 P-element 2882 2886 15 72 '6-9 56.64 3.6 3.3 intergenic Pld + chr2R_15_6240001 chr2R_6240001 0.40 RAL-367 94 chr2R 6493160 6493180 transib2 2813 2822 4 20 '2-2 66.84 2.8 1.1 intergenic not near genes chr2R_4_6490001 chr2R_6490001 0.50 RAL-367 95 chr2R 6508945 6509021 Burdock 6386 1 5 76 '2-3 63.75 3.2 1.2 intron,3` UTR jing +,CR45127 - chr2R_5_6505001 chr2R_6505001 0.40 RAL-367 96 chr2R 6830015 6830084 1360 9 1 20 69 '8-12 63.12 4.9 3.4 exon CG15236 + chr2R_20_6830001 chr2R_6830001 0.40 RAL-367 97 chr2R 6872008 6872071 P-element 2881 2880 14 63 '6-8 42.85 6.5 1.9 intron coro - chr2R_14_6870001 chr2R_6870001 0.43 RAL-367 98 chr2R 6873309 6873385 1360 2 3388 25 76 '15-10 69.91 5.3 4.0 intron,intron CG9447 -,CR44169 + chr2R_25_6870001 chr2R_6870001 0.60 RAL-367 99 chr2R 7081233 7081291 roo 9049 8664 11 58 '8-3 69.64 2.0 3.7 intergenic not near genes chr2R_11_7080001 chr2R_7080001 0.73 RAL-367 100 chr2R 7955094 7955160 FB 9 2 12 66 '7-5 60.41 2.2 3.8 intron CG14764 - chr2R_12_7955001 chr2R_7955001 0.58 RAL-367 101 chr2R 8086809 8086860 1360 329 3387 17 51 '7-10 58.76 4.7 3.0 3` UTR sut1 + chr2R_17_8085001 chr2R_8085001 0.41 RAL-367 102 chr2R 8310899 8310915 pogo 18 2 5 16 '3-2 60.00 5.8 0.7 3` UTR CR44449 - chr2R_5_8310001 chr2R_8310001 0.60 RAL-367 103 chr2R 8493070 8493128 roo 24 411 9 58 '5-4 75.12 2.2 2.8 intron mtt - chr2R_9_8490001 chr2R_8490001 0.56 RAL-367 104 chr2R 8527833 8527904 R1A1-element 4900 5333 10 71 '3-7 64.14 4.8 1.7 intron mtt - chr2R_10_8525001 chr2R_8525001 0.30 RAL-367 105 chr2R 8652412 8652484 1360 3386 4 20 72 '10-10 65.68 5.4 3.1 intron ptc + chr2R_20_8650001 chr2R_8650001 0.50 RAL-367 106 chr2R 8864674 8864829 diver 225 6002 15 155 '11-4 65.17 3.9 3.1 intron RyR + chr2R_15_8860001 chr2R_8860001 0.73 RAL-367 107 chr2R 9300918 9300994 pogo 3 2099 7 76 '5-2 64.35 2.0 2.3 3` UTR Drep-2 + chr2R_7_9300001 chr2R_9300001 0.71 RAL-367 108 chr2R 9758245 9758310 blood 1 7387 11 65 '3-8 62.13 2.7 3.0 intron trpl + chr2R_11_9755001 chr2R_9755001 0.27 RAL-367 109 chr2R 9870963 9871021 roo 8664 397 12 58 '5-7 69.69 1.5 4.8 intron cbx - chr2R_12_9870001 chr2R_9870001 0.42 RAL-367 110 chr2R 9948358 9948425 hopper 1408 4 20 67 '12-8 63.70 4.0 4.0 intron Mef2 - chr2R_20_9945001 chr2R_9945001 0.60 RAL-367 111 chr2R 10351641 10351726 blood 379 7009 14 85 '8-6 66.33 1.9 4.8 intron,3` UTR,3` UTR CG42732 -,CG43172 -,CG43200 - chr2R_14_10350001 chr2R_10350001 0.57 RAL-367 112 chr2R 10473691 10473770 blood 7015 379 13 79 '6-7 65.81 3.1 3.2 intron whd - chr2R_13_10470001 chr2R_10470001 0.46 RAL-367 113 chr2R 10542130 10542205 1360 2 3387 22 75 '8-14 63.17 3.5 4.9 intron lola - chr2R_22_10540001 chr2R_10540001 0.36 RAL-367 114 chr2R 11030559 11030582 F-element 46 23 7 23 '3-4 60.37 1.6 2.7 intron luna - chr2R_7_11030001 chr2R_11030001 0.43 RAL-367 115 chr2R 11132900 11132976 hobo 2938 1 15 76 '7-8 63.08 2.4 4.4 intergenic not near genes chr2R_15_11130001 chr2R_11130001 0.47 RAL-367 116 chr2R 11248051 11248135 ZAM 456 1 17 84 '9-8 62.85 1.4 7.1 intergenic CG34227 + chr2R_17_11245001 chr2R_11245001 0.53 RAL-367 117 chr2R 11256441 11256515 roo 8666 404 14 74 '5-9 67.86 1.4 5.8 intergenic CG13223 +,Cpr47Eb + chr2R_14_11255001 chr2R_11255001 0.36 RAL-367 118 chr2R 11395460 11395532 roo 402 8666 10 72 '5-5 67.47 2.8 2.6 intron sprt - chr2R_10_11395001 chr2R_11395001 0.50 RAL-367 119 chr2R 12185329 12185406 accord 7381 2 14 77 '10-4 65.99 6.1 2.0 3` UTR,3` UTR CG13175 +,CG33964 + chr2R_14_12185001 chr2R_12185001 0.71 RAL-367 120 chr2R 12479065 12479103 FB 16 23 8 38 '4-4 67.91 1.0 4.0 intron Dh44-R2 + chr2R_8_12475001 chr2R_12475001 0.50 RAL-367 121 chr2R 12782259 12782324 412 10 487 9 65 '3-6 64.71 3.8 1.9 intron sca + chr2R_9_12780001 chr2R_12780001 0.33 RAL-367 122 chr2R 13314150 13314178 jockey 4706 4678 11 28 '6-5 63.90 6.2 1.5 intergenic not near genes chr2R_11_13310001 chr2R_13310001 0.55 RAL-367 123 chr2R 13476860 13476912 Stalker2 7628 7554 5 52 '2-3 59.73 3.6 1.1 intron arr - chr2R_5_13475001 chr2R_13475001 0.40 RAL-367 124 chr2R 13664111 13664188 hopper 1414 1412 20 77 '9-11 63.46 3.9 4.1 intron fas + chr2R_20_13660001 chr2R_13660001 0.45 RAL-367 125 chr2R 13686426 13686448 McClintock 21 5951 6 22 '4-2 66.22 3.3 1.4 intron fas + chr2R_6_13685001 chr2R_13685001 0.67 RAL-367 126 chr2R 13705839 13705923 roo 411 8663 16 84 '7-9 69.10 5.0 2.7 intron fas + chr2R_16_13705001 chr2R_13705001 0.44 RAL-367 127 chr2R 13714855 13714915 Transpac 14 302 12 60 '3-9 67.33 2.5 3.4 exon fas + chr2R_12_13710001 chr2R_13710001 0.25 RAL-367 128 chr2R 13995901 13995956 FB 4 15 11 55 '7-4 62.29 5.8 1.6 intron mam + chr2R_11_13995001 chr2R_13995001 0.64 RAL-367 129 chr2R 14134502 14134529 FB 32 3 5 27 '1-4 63.83 2.4 1.5 intron Prosap - chr2R_5_14130001 chr2R_14130001 0.20 RAL-367 130 chr2R 14306791 14306869 hobo 1 2710 17 78 '11-6 63.20 4.0 3.4 intergenic not near genes chr2R_17_14305001 chr2R_14305001 0.65 RAL-367 131 chr2R 14484815 14484872 Burdock 6148 252 9 57 '4-5 66.25 0.9 4.7 intron L + chr2R_9_14480001 chr2R_14480001 0.44 RAL-367 132 chr2R 14497189 14497268 HMS-Beagle 4 247 8 79 '2-6 68.93 2.4 2.4 3` UTR L + chr2R_8_14495001 chr2R_14495001 0.25 RAL-367 133 chr2R 16050643 16050720 roo 405 8664 14 77 '6-8 68.43 4.0 2.8 intron CG8405 + chr2R_14_16050001 chr2R_16050001 0.43 RAL-367 134 chr2R 16056461 16056535 mdg3 5261 248 26 74 '13-13 62.99 3.1 6.3 intron CG8405 + chr2R_26_16055001 chr2R_16055001 0.50 RAL-367 135 chr2R 16451801 16451878 Burdock 249 6135 6 77 '3-3 68.89 2.7 1.6 intergenic not near genes chr2R_6_16450001 chr2R_16450001 0.50 RAL-367 136 chr2R 17170536 17170605 hobo 7 2937 12 69 '9-3 63.79 4.6 2.1 intergenic not near genes chr2R_12_17170001 chr2R_17170001 0.75 RAL-367 137 chr2R 17343984 17344043 hobo 11 2931 9 59 '5-4 63.17 4.0 1.8 intron mbl + chr2R_9_17340001 chr2R_17340001 0.56 RAL-367 138 chr2R 17892088 17892138 Ivk 5355 1 16 50 '5-11 59.17 3.7 3.4 intron Elk + chr2R_16_17890001 chr2R_17890001 0.31 RAL-367 139 chr2R 18050995 18051011 mdg1 7055 33 4 16 '1-3 64.35 18.8 0.2 exon Muc55B - chr2R_4_18050001 chr2R_18050001 0.25 RAL-367 140 chr2R 18541944 18542023 Transpac 4918 306 16 79 '9-7 66.24 5.7 2.4 intron Rgk2 + chr2R_16_18540001 chr2R_18540001 0.56 RAL-367 141 chr2R 18831317 18831413 roo 8664 453 21 96 '15-6 67.33 2.1 6.8 intron CG15082 + chr2R_21_18830001 chr2R_18830001 0.71 RAL-367 142 chr2R 19085821 19085905 diver 5885 225 12 84 '7-5 63.41 2.1 3.9 intron 5-HT1A + chr2R_12_19085001 chr2R_19085001 0.58 RAL-367 143 chr2R 19200026 19200094 hopper 2 389 14 68 '5-9 50.67 5.4 2.2 intron hppy + chr2R_14_19200001 chr2R_19200001 0.36 RAL-367 144 chr2R 19330276 19330306 McClintock 5953 5983 13 30 '6-7 65.95 4.0 2.6 intron Rgk1 - chr2R_13_19330001 chr2R_19330001 0.46 RAL-367 145 chr2R 19639273 19639348 roo 8663 402 17 75 '10-7 65.59 4.7 3.0 intergenic not near genes chr2R_17_19635001 chr2R_19635001 0.59 RAL-367 146 chr2R 19849207 19849283 mdg3 5498 5257 19 76 '12-7 64.59 2.7 5.1 intergenic not near genes chr2R_19_19845001 chr2R_19845001 0.63 RAL-367 147 chr2R 20397131 20397218 flea 257 4753 9 87 '5-4 70.22 3.1 2.2 intergenic not near genes chr2R_9_20395001 chr2R_20395001 0.56 RAL-367 148 chr2R 20417587 20417665 roo 412 6 17 78 '11-6 67.00 3.6 3.7 intergenic not near genes chr2R_17_20415001 chr2R_20415001 0.65 RAL-367 149 chr2R 20510197 20510275 rover 348 6956 10 78 '7-3 68.00 4.5 1.8 intergenic not near genes chr2R_10_20510001 chr2R_20510001 0.70 RAL-367 150 chr2R 20574961 20575036 roo 405 2 16 75 '8-8 68.05 3.4 3.6 intron qsm - chr2R_16_20570001 chr2R_20570001 0.50 RAL-367 151 chr2R 21235852 21235886 jockey 8 35 8 34 '5-3 66.35 7.4 1.0 intron ASPP - chr2R_8_21235001 chr2R_21235001 0.62 RAL-367 152 chr2R 21848229 21848283 copia 4892 252 5 54 '1-4 58.93 1.2 2.3 intergenic not near genes chr2R_5_21845001 chr2R_21845001 0.20 RAL-367 153 chr2R 22452203 22452266 hopper 1 116 6 63 '5-1 63.71 2.8 1.6 intergenic not near genes chr2R_6_22450001 chr2R_22450001 0.83 RAL-367 154 chr2R 22469442 22469525 HMS-Beagle 247 6796 16 83 '4-12 64.81 2.0 5.3 intron CG10384 + chr2R_16_22465001 chr2R_22465001 0.25 RAL-367 155 chr2R 22516159 22516229 Transpac 11 5228 13 70 '2-11 63.18 1.1 6.2 intron px - chr2R_13_22515001 chr2R_22515001 0.15 RAL-367 156 chr2R 22545329 22545403 Tirant 8114 8503 11 74 '3-8 63.46 3.1 2.7 intron px - chr2R_11_22545001 chr2R_22545001 0.27 RAL-367 157 chr2R 22592956 22593022 P-element 7 2883 9 66 '5-4 47.64 1.3 3.9 5` UTR dnr1 - chr2R_9_22590001 chr2R_22590001 0.56 RAL-367 158 chr2R 22751909 22751994 opus 7498 109 8 85 '5-3 66.58 4.9 1.4 intron CG42260 - chr2R_8_22750001 chr2R_22750001 0.62 RAL-367 159 chr2R 23004574 23004598 pogo 28 9 5 24 '3-2 66.85 2.9 1.3 intron twi + chr2R_5_23000001 chr2R_23000001 0.60 RAL-367 160 chr2R 23267863 23267939 297 6581 389 13 76 '10-3 68.44 5.3 2.1 intergenic not near genes chr2R_13_23265001 chr2R_23265001 0.77 RAL-367 161 chr2R 23389381 23389447 412 3 481 14 66 '6-8 62.76 4.7 2.5 3` UTR CG3530 - chr2R_14_23385001 chr2R_23385001 0.43 RAL-367 162 chr2R 23449597 23449672 mdg3 5493 5253 9 75 '2-7 61.09 4.9 1.5 intron CG43795 + chr2R_9_23445001 chr2R_23445001 0.22 RAL-367 163 chr2R 23491269 23491289 F-element 39 19 4 20 '2-2 64.20 11.5 0.3 3` UTR CG43795 + chr2R_4_23490001 chr2R_23490001 0.50 RAL-367 164 chr2R 23883222 23883306 opus 7500 110 10 84 '2-8 67.96 4.9 1.7 3` UTR PHDP - chr2R_10_23880001 chr2R_23880001 0.20 RAL-367 165 chr2R 24021578 24021637 pogo 15 2091 9 59 '5-4 69.06 4.2 1.7 intron CG3907 - chr2R_9_24020001 chr2R_24020001 0.56 RAL-367 166 chr2R 24211618 24211682 Stalker2 7637 7251 16 64 '2-14 60.26 2.9 4.1 intergenic not near genes chr2R_16_24210001 chr2R_24210001 0.12 RAL-367 167 chr2R 24853222 24853274 I-element 5350 13 15 52 '5-10 63.37 4.0 3.0 intergenic not near genes chr2R_15_24850001 chr2R_24850001 0.33 RAL-367 168 chr3L 34538 34571 HeT-A 6027 6060 11 33 '7-4 62.12 5.9 1.6 intergenic not near genes chr3L_11_30001 chr3L_30001 0.64 RAL-367 169 chr3L 46923 46989 FB 4 7 6 66 '3-3 58.06 1.7 2.2 intergenic not near genes chr3L_6_45001 chr3L_45001 0.50 RAL-367 170 chr3L 477696 477769 roo 9066 2 11 73 '3-8 66.21 3.1 2.7 intron klar - chr3L_11_475001 chr3L_475001 0.27 RAL-367 171 chr3L 680266 680323 S-element 1 1707 6 57 '5-1 65.83 3.9 1.2 5` UTR CG17129 - chr3L_6_680001 chr3L_680001 0.83 RAL-367 172 chr3L 751725 751794 hopper 8 8 10 69 '2-8 69.29 4.4 1.9 intron,intron hng3 -,emc + chr3L_10_750001 chr3L_750001 0.20 RAL-367 173 chr3L 1745317 1745398 roo 411 8666 11 81 '7-4 67.23 3.3 2.6 3` UTR Gk + chr3L_11_1745001 chr3L_1745001 0.64 RAL-367 174 chr3L 1832219 1832294 pogo 3 2100 13 75 '5-8 62.24 2.6 3.6 intergenic Cpr62Bb -,Cpr62Ba - chr3L_13_1830001 chr3L_1830001 0.38 RAL-367 175 chr3L 1976096 1976136 Tabor 7308 6864 4 40 '3-1 60.00 1.2 1.8 intergenic not near genes chr3L_4_1975001 chr3L_1975001 0.75 RAL-367 176 chr3L 2016635 2016698 Transpac 5226 4935 10 63 '9-1 65.07 3.7 2.1 intergenic not near genes chr3L_10_2015001 chr3L_2015001 0.90 RAL-367 177 chr3L 2309846 2309905 Transpac 287 4919 12 59 '4-8 64.52 2.0 4.0 intergenic not near genes chr3L_12_2305001 chr3L_2305001 0.33 RAL-367 178 chr3L 2333043 2333063 jockey 4963 4983 9 20 '4-5 57.92 7.3 1.1 intron MsR1 + chr3L_9_2330001 chr3L_2330001 0.44 RAL-367 179 chr3L 2485915 2485962 jockey 4975 4677 6 47 '2-4 59.81 1.1 2.9 intron CG45186 + chr3L_6_2485001 chr3L_2485001 0.33 RAL-367 180 chr3L 5168357 5168431 roo 6 408 21 74 '8-13 64.25 4.0 4.2 intron shep - chr3L_21_5165001 chr3L_5165001 0.38 RAL-367 181 chr3L 5203791 5203810 jockey 16 34 13 19 '10-3 54.24 8.2 1.4 intron shep - chr3L_13_5200001 chr3L_5200001 0.77 RAL-367 182 chr3L 5221170 5221201 jockey 4702 4671 17 31 '11-6 61.71 3.1 4.1 intron shep - chr3L_17_5220001 chr3L_5220001 0.65 RAL-367 183 chr3L 5353707 5353778 1360 6 2 18 71 '7-11 64.56 4.3 3.4 intron lama - chr3L_18_5350001 chr3L_5350001 0.39 RAL-367 184 chr3L 5409640 5409700 Transpac 4942 311 10 60 '1-9 57.20 0.0 10.0 intergenic not near genes chr3L_10_5405001 chr3L_5405001 0.10 RAL-367 185 chr3L 6001448 6001498 hobo 2914 1 12 50 '5-7 69.09 4.5 2.2 intron PVRAP + chr3L_12_6000001 chr3L_6000001 0.42 RAL-367 186 chr3L 6215743 6215774 I-element 2 33 13 31 '6-7 65.59 5.0 2.2 intron LanA - chr3L_13_6215001 chr3L_6215001 0.46 RAL-367 187 chr3L 7286221 7286302 roo 412 3 10 81 '6-4 68.13 2.9 2.6 intron unc-13-4A - chr3L_10_7285001 chr3L_7285001 0.60 RAL-367 188 chr3L 7505527 7505601 diver 222 4 9 74 '2-7 61.81 1.2 4.1 intergenic CG7548 - chr3L_9_7505001 chr3L_7505001 0.22 RAL-367 189 chr3L 8580531 8580550 Stalker 6847 17 6 19 '2-4 60.67 8.6 0.6 intron CG43078 + chr3L_6_8580001 chr3L_8580001 0.33 RAL-367 190 chr3L 8606752 8606825 roo 402 8665 11 73 '8-3 64.17 3.8 2.3 intron CG6282 + chr3L_11_8605001 chr3L_8605001 0.73 RAL-367 191 chr3L 8625637 8625719 Stalker2 7246 402 22 82 '17-5 64.57 3.3 5.1 intron Zasp66 + chr3L_22_8625001 chr3L_8625001 0.77 RAL-367 192 chr3L 8883856 8883926 hobo 2933 2 13 70 '1-12 63.30 3.2 3.1 intron dally + chr3L_13_8880001 chr3L_8880001 0.08 RAL-367 193 chr3L 9086842 9086884 1360 3382 3359 12 42 '10-2 67.29 4.2 2.3 exon Tequila + chr3L_12_9085001 chr3L_9085001 0.83 RAL-367 194 chr3L 9493062 9493139 pogo 2100 6 8 77 '6-2 66.90 1.9 2.8 intergenic not near genes chr3L_8_9490001 chr3L_9490001 0.75 RAL-367 195 chr3L 9571770 9571848 hopper 1414 1413 10 78 '6-4 63.77 1.2 4.5 intron CG42673 + chr3L_10_9570001 chr3L_9570001 0.60 RAL-367 196 chr3L 9907300 9907336 BS 5004 5065 6 36 '3-3 61.78 0.3 4.6 intergenic not near genes chr3L_6_9905001 chr3L_9905001 0.50 RAL-367 197 chr3L 10009589 10009659 roo 8673 9070 11 70 '7-4 62.12 3.4 2.5 intron dpr6 + chr3L_11_10005001 chr3L_10005001 0.64 RAL-367 198 chr3L 10173011 10173053 Juan 4205 4043 5 42 '2-3 60.09 0.9 2.6 intron dpr10 - chr3L_5_10170001 chr3L_10170001 0.40 RAL-367 199 chr3L 10209989 10210063 hobo 2936 1 16 74 '5-11 62.42 1.4 6.7 intergenic not near genes chr3L_16_10205001 chr3L_10205001 0.31 RAL-367 200 chr3L 10726386 10726405 hobo 3 10 7 19 '3-4 62.49 4.6 1.2 intergenic not near genes chr3L_7_10725001 chr3L_10725001 0.43 RAL-367 201 chr3L 11164957 11165030 P-element 2 3 17 73 '3-14 48.61 4.5 3.1 intergenic Alg10 +,CR43989 - chr3L_17_11160001 chr3L_11160001 0.18 RAL-367 202 chr3L 11358786 11358852 Burdock 3 6380 11 66 '7-4 64.41 1.9 3.8 intergenic not near genes chr3L_11_11355001 chr3L_11355001 0.64 RAL-367 203 chr3L 11582434 11582459 jockey 31 6 5 25 '2-3 63.20 5.0 0.8 3` UTR CG32086 - chr3L_5_11580001 chr3L_11580001 0.40 RAL-367 204 chr3L 11705254 11705314 FB 2 14 19 60 '8-11 62.16 3.6 4.1 intron CG11658 - chr3L_19_11705001 chr3L_11705001 0.42 RAL-367 205 chr3L 12125397 12125482 HMS-Beagle2 7196 6881 13 85 '3-10 70.05 2.2 4.1 intergenic Ir68b -,yps - chr3L_13_12125001 chr3L_12125001 0.23 RAL-367 206 chr3L 12799014 12799074 FB 12 5 15 60 '9-6 67.59 6.0 2.1 intron Atg1 - chr3L_15_12795001 chr3L_12795001 0.60 RAL-367 207 chr3L 12863208 12863275 hobo 5 2934 9 67 '6-3 61.59 3.8 1.9 intergenic CG10943 - chr3L_9_12860001 chr3L_12860001 0.67 RAL-367 208 chr3L 12863688 12863760 Transpac 4920 5220 8 72 '6-2 66.80 3.6 1.7 intergenic not near genes chr3L_8_12860001 chr3L_12860001 0.75 RAL-367 209 chr3L 13348057 13348089 F-element 235 267 4 32 '2-2 69.00 3.0 1.0 intergenic not near genes chr3L_4_13345001 chr3L_13345001 0.50 RAL-367 210 chr3L 13372977 13373000 jockey 4692 4669 6 23 '3-3 61.01 4.9 1.0 intergenic not near genes chr3L_6_13370001 chr3L_13370001 0.50 RAL-367 211 chr3L 13618776 13618861 opus 7113 498 9 85 '3-6 73.15 4.4 1.7 intron bru-3 - chr3L_9_13615001 chr3L_13615001 0.33 RAL-367 212 chr3L 13625616 13625644 jockey 4685 4713 5 28 '3-2 62.04 8.5 0.5 intron bru-3 - chr3L_5_13625001 chr3L_13625001 0.60 RAL-367 213 chr3L 13627765 13627814 jockey 4988 4769 6 49 '4-2 57.11 4.8 1.0 intron bru-3 - chr3L_6_13625001 chr3L_13625001 0.67 RAL-367 214 chr3L 13728532 13728590 hobo 2928 2 5 58 '1-4 62.14 4.8 0.9 intron bru-3 - chr3L_5_13725001 chr3L_13725001 0.20 RAL-367 215 chr3L 14153748 14153806 hopper 13 1405 4 58 '2-2 58.67 8.3 0.4 intergenic not near genes chr3L_4_14150001 chr3L_14150001 0.50 RAL-367 216 chr3L 14260228 14260248 F-element 239 259 6 20 '4-2 57.69 9.8 0.6 intergenic not near genes chr3L_6_14260001 chr3L_14260001 0.67 RAL-367 217 chr3L 14603276 14603292 jockey 4695 4679 7 16 '4-3 61.20 4.2 1.3 intergenic not near genes chr3L_7_14600001 chr3L_14600001 0.57 RAL-367 218 chr3L 15494657 15494732 S-element 1 1710 9 75 '8-1 61.94 3.1 2.2 intron CG12355 - chr3L_9_15490001 chr3L_15490001 0.89 RAL-367 219 chr3L 15619380 15619442 Max-element 8235 19 8 62 '4-4 68.20 4.4 1.5 intron comm3 - chr3L_8_15615001 chr3L_15615001 0.50 RAL-367 220 chr3L 15890492 15890570 Tabor 4 486 18 78 '6-12 62.63 4.6 3.2 intron pHCl - chr3L_18_15890001 chr3L_15890001 0.33 RAL-367 221 chr3L 16087460 16087508 P-element 2880 23 5 48 '3-2 44.27 3.8 1.0 5` UTR Taspase1 - chr3L_5_16085001 chr3L_16085001 0.60 RAL-367 222 chr3L 16273709 16273788 297 1 6973 9 79 '6-3 62.43 4.1 1.8 intergenic CG13066 + chr3L_9_16270001 chr3L_16270001 0.67 RAL-367 223 chr3L 16364029 16364086 Bari1 1707 28 4 57 '1-3 74.26 5.6 0.6 intergenic Cpr72Ea + chr3L_4_16360001 chr3L_16360001 0.25 RAL-367 224 chr3L 16784805 16784874 Max-element 8522 8233 6 69 '3-3 65.38 2.6 1.7 intron CG9706 + chr3L_6_16780001 chr3L_16780001 0.50 RAL-367 225 chr3L 16787388 16787407 Chimpo 150 169 6 19 '3-3 60.00 1.4 2.5 intergenic CG9674 -,Int6 - chr3L_6_16785001 chr3L_16785001 0.50 RAL-367 226 chr3L 17829895 17829960 roo 394 2 8 65 '1-7 61.67 1.2 3.6 intron Grd + chr3L_8_17825001 chr3L_17825001 0.12 RAL-367 227 chr3L 18197902 18197944 F-element 4447 4662 10 42 '7-3 57.33 0.5 6.7 intergenic not near genes chr3L_10_18195001 chr3L_18195001 0.70 RAL-367 228 chr3L 18472918 18472983 3S18 5764 324 13 65 '12-1 68.33 3.2 3.1 intergenic not near genes chr3L_13_18470001 chr3L_18470001 0.92 RAL-367 229 chr3L 18489740 18489797 Burdock 6375 6145 4 57 '3-1 59.00 1.9 1.4 intron AstC-R2 - chr3L_4_18485001 chr3L_18485001 0.75 RAL-367 230 chr3L 18545579 18545657 flea 4760 255 13 78 '8-5 70.27 2.5 3.7 intergenic not near genes chr3L_13_18545001 chr3L_18545001 0.62 RAL-367 231 chr3L 18546116 18546188 Max-element 4 302 11 72 '3-8 66.46 4.7 1.9 intergenic not near genes chr3L_11_18545001 chr3L_18545001 0.27 RAL-367 232 chr3L 18599916 18599941 hobo 29 4 5 25 '4-1 69.44 3.4 1.1 intergenic CG13380 -,CG4174 - chr3L_5_18595001 chr3L_18595001 0.80 RAL-367 233 chr3L 18707311 18707361 Stalker2 3 7623 10 50 '8-2 64.71 1.6 3.8 intergenic not near genes chr3L_10_18705001 chr3L_18705001 0.80 RAL-367 234 chr3L 19021688 19021712 Doc 24 4 6 24 '3-3 66.78 3.2 1.4 intron nkd - chr3L_6_19020001 chr3L_19020001 0.50 RAL-367 235 chr3L 19136318 19136396 Stalker4 407 6957 8 78 '5-3 66.40 3.3 1.9 intron CG14082 - chr3L_8_19135001 chr3L_19135001 0.62 RAL-367 236 chr3L 19136364 19136385 Stalker 33 12 6 21 '3-3 60.66 4.4 1.1 intron CG14082 - chr3L_6_19135001 chr3L_19135001 0.50 RAL-367 237 chr3L 19153608 19153635 R1A1-element 5311 5333 4 27 '3-1 67.12 5.7 0.6 intron fz2 - chr3L_4_19150001 chr3L_19150001 0.75 RAL-367 238 chr3L 19274727 19274875 transib2 408 2819 12 148 '8-4 64.33 1.3 5.2 intergenic not near genes chr3L_12_19270001 chr3L_19270001 0.67 RAL-367 239 chr3L 19290243 19290324 opus 1 498 20 81 '9-11 69.10 3.2 4.8 intron Gbs-76A - chr3L_20_19290001 chr3L_19290001 0.45 RAL-367 240 chr3L 19349945 19350001 1360 3385 3198 9 56 '6-3 60.74 4.2 1.7 intron CG32206 - chr3L_9_19345001 chr3L_19345001 0.67 RAL-367 241 chr3L 19371972 19372040 gypsy10 5983 5643 7 68 '2-5 67.87 4.6 1.2 intron CG32206 - chr3L_7_19370001 chr3L_19370001 0.29 RAL-367 242 chr3L 19482069 19482122 P-element 2865 2884 11 53 '5-6 48.53 6.1 1.5 intergenic not near genes chr3L_11_19480001 chr3L_19480001 0.45 RAL-367 243 chr3L 20065275 20065331 pogo 2084 11 7 56 '3-4 74.66 2.5 2.0 intron sNPF-R - chr3L_7_20065001 chr3L_20065001 0.43 RAL-367 244 chr3L 20199301 20199382 Burdock 255 6137 16 81 '12-4 67.14 3.3 3.7 intergenic not near genes chr3L_16_20195001 chr3L_20195001 0.75 RAL-367 245 chr3L 20361690 20361762 pogo 2098 9 4 72 '2-2 67.00 1.9 1.4 intergenic DNApol-alpha60 -,Toll-9 - chr3L_4_20360001 chr3L_20360001 0.50 RAL-367 246 chr3L 21057775 21057822 jockey 4674 4985 9 47 '6-3 59.73 5.8 1.3 intron siz + chr3L_9_21055001 chr3L_21055001 0.67 RAL-367 247 chr3L 22338813 22338843 jockey 4672 4702 10 30 '5-5 62.90 10.2 0.9 intron Ten-m - chr3L_10_22335001 chr3L_22335001 0.50 RAL-367 248 chr3L 22408506 22408580 Burdock 256 9 7 74 '4-3 67.62 3.6 1.5 intergenic not near genes chr3L_7_22405001 chr3L_22405001 0.57 RAL-367 249 chr3L 22635684 22635761 hopper 1 1412 7 77 '1-6 64.95 4.6 1.2 intron CG14459 - chr3L_7_22635001 chr3L_22635001 0.14 RAL-367 250 chr3L 22885158 22885225 P-element 2880 4 6 67 '1-5 54.67 8.2 0.7 intron slif + chr3L_6_22885001 chr3L_22885001 0.17 RAL-367 251 chr3L 23146484 23146517 1360 3 36 14 33 '7-7 64.44 9.6 1.3 intergenic not near genes chr3L_14_23145001 chr3L_23145001 0.50 RAL-367 252 chr3L 23227616 23227681 412 7537 7 4 65 '2-2 60.87 0.9 2.1 intron nAChRalpha4 + chr3L_4_23225001 chr3L_23225001 0.50 RAL-367 253 chr3L 25186283 25186344 412 7542 7 8 61 '4-4 59.50 2.5 2.3 intergenic not near genes chr3L_8_25185001 chr3L_25185001 0.50 RAL-367 254 chr3L 25752315 25752386 P-element 2881 1 5 71 '1-4 61.35 4.1 1.0 intergenic not near genes chr3L_5_25750001 chr3L_25750001 0.20 RAL-367 255 chr3R 1167850 1167867 Doc 37 35 5 17 '2-3 55.10 14.6 0.3 intron CG15831 + chr3R_5_1165001 chr3R_1165001 0.40 RAL-367 256 chr3R 4565287 4565312 1360 3378 3353 12 25 '5-7 71.46 7.5 1.4 intergenic not near genes chr3R_12_4565001 chr3R_4565001 0.42 RAL-367 257 chr3R 5065721 5065785 Tirant 8486 8107 4 64 '3-1 63.66 4.5 0.7 intergenic not near genes chr3R_4_5065001 chr3R_5065001 0.75 RAL-367 258 chr3R 5066621 5066694 Tirant 8113 394 17 73 '7-10 63.76 3.8 3.5 intergenic not near genes chr3R_17_5065001 chr3R_5065001 0.41 RAL-367 259 chr3R 5107825 5107850 blood 7042 6 4 25 '2-2 70.31 4.4 0.7 intergenic not near genes chr3R_4_5105001 chr3R_5105001 0.50 RAL-367 260 chr3R 5156930 5156945 BS 5017 5002 4 15 '3-1 57.33 9.5 0.4 intron dpr16 + chr3R_4_5155001 chr3R_5155001 0.75 RAL-367 261 chr3R 5192846 5192903 mdg3 5481 5259 5 57 '2-3 60.80 4.5 0.9 intron cno - chr3R_5_5190001 chr3R_5190001 0.40 RAL-367 262 chr3R 5571337 5571378 springer 23 7504 4 41 '2-2 60.78 6.3 0.5 intron CRMP + chr3R_4_5570001 chr3R_5570001 0.50 RAL-367 263 chr3R 5672991 5673052 Tirant 399 15 8 61 '6-2 65.86 5.5 1.2 intron Atg17 + chr3R_8_5670001 chr3R_5670001 0.75 RAL-367 264 chr3R 5830088 5830151 roo 395 8668 4 63 '1-3 69.00 3.1 1.0 5` UTR glob3 + chr3R_4_5830001 chr3R_5830001 0.25 RAL-367 265 chr3R 5861021 5861101 Tirant 404 8112 12 80 '8-4 64.13 5.2 1.9 intron CG2017 - chr3R_12_5860001 chr3R_5860001 0.67 RAL-367 266 chr3R 5911013 5911085 412 10 494 7 72 '1-6 62.21 3.3 1.6 intron CG34113 - chr3R_7_5910001 chr3R_5910001 0.14 RAL-367 267 chr3R 5974306 5974378 roo 8664 400 4 72 '3-1 67.67 3.3 0.9 intron Obp83a - chr3R_4_5970001 chr3R_5970001 0.75 RAL-367 268 chr3R 6040920 6040976 roo 8671 9055 7 56 '4-3 66.23 5.9 1.0 intergenic not near genes chr3R_7_6040001 chr3R_6040001 0.57 RAL-367 269 chr3R 6322454 6322527 flea 5005 4756 7 73 '3-4 67.05 2.8 1.8 intron Osi17 + chr3R_7_6320001 chr3R_6320001 0.43 RAL-367 270 chr3R 6464095 6464175 roo 8668 412 6 80 '3-3 66.22 4.7 1.1 intergenic not near genes chr3R_6_6460001 chr3R_6460001 0.50 RAL-367 271 chr3R 7725723 7725798 opus 490 110 9 75 '6-3 67.51 5.2 1.5 intergenic not near genes chr3R_9_7725001 chr3R_7725001 0.67 RAL-367 272 chr3R 7852803 7852877 pogo 1 2091 6 74 '3-3 62.00 4.3 1.1 intron CG34384 + chr3R_6_7850001 chr3R_7850001 0.50 RAL-367 273 chr3R 8134852 8134923 roo 404 5 6 71 '5-1 73.44 1.9 2.1 intergenic not near genes chr3R_6_8130001 chr3R_8130001 0.83 RAL-367 274 chr3R 8250399 8250461 P-element 2876 2882 12 62 '6-6 43.36 5.1 2.0 intergenic CG15864 +,mtg + chr3R_12_8250001 chr3R_8250001 0.50 RAL-367 275 chr3R 8510242 8510303 roo 388 8663 8 61 '3-5 68.33 5.5 1.2 exon Or85b - chr3R_8_8510001 chr3R_8510001 0.38 RAL-367 276 chr3R 9024844 9024904 pogo 14 2091 10 60 '4-6 65.20 5.6 1.5 intron neur - chr3R_10_9020001 chr3R_9020001 0.40 RAL-367 277 chr3R 9192517 9192592 invader3 5193 279 7 75 '1-6 66.69 1.5 2.8 intron pum - chr3R_7_9190001 chr3R_9190001 0.14 RAL-367 278 chr3R 9348910 9348985 S-element 1714 7 4 75 '2-2 65.67 3.2 1.0 intron CG45050 + chr3R_4_9345001 chr3R_9345001 0.50 RAL-367 279 chr3R 9610093 9610125 roo 1 33 8 32 '3-5 65.83 5.7 1.2 intron CG8312 + chr3R_8_9610001 chr3R_9610001 0.38 RAL-367 280 chr3R 9867929 9867983 hopper 1411 23 11 54 '5-6 70.74 3.5 2.4 5` UTR Teh1 - chr3R_11_9865001 chr3R_9865001 0.45 RAL-367 281 chr3R 10029369 10029435 FB 3 8 11 66 '8-3 67.60 3.0 2.8 intron Mical - chr3R_11_10025001 chr3R_10025001 0.73 RAL-367 282 chr3R 10030753 10030784 BS 5032 5001 12 31 '10-2 57.16 2.8 3.2 intron Mical - chr3R_12_10030001 chr3R_10030001 0.83 RAL-367 283 chr3R 10182542 10182616 roo 405 8667 9 74 '3-6 67.69 3.1 2.2 intron CG12814 - chr3R_9_10180001 chr3R_10180001 0.33 RAL-367 284 chr3R 10285741 10285786 17.6 7407 6952 5 45 '4-1 67.73 4.4 0.9 intron CG43143 + chr3R_5_10285001 chr3R_10285001 0.80 RAL-367 285 chr3R 10424814 10424895 mdg3 247 5253 9 81 '4-5 66.07 1.3 3.9 intergenic not near genes chr3R_9_10420001 chr3R_10420001 0.44 RAL-367 286 chr3R 10460442 10460473 BS 5023 4992 4 31 '3-1 63.34 3.1 1.0 intergenic not near genes chr3R_4_10460001 chr3R_10460001 0.75 RAL-367 287 chr3R 10544391 10544421 Doc 4455 4485 12 30 '8-4 59.07 5.1 2.0 intron hth - chr3R_12_10540001 chr3R_10540001 0.67 RAL-367 288 chr3R 10986349 10986407 copia 4885 249 11 58 '3-8 67.30 0.7 6.5 intron CG34114 + chr3R_11_10985001 chr3R_10985001 0.27 RAL-367 289 chr3R 11177709 11177758 copia 247 4890 6 49 '3-3 67.41 0.8 3.3 3` UTR Ugt86Dh + chr3R_6_11175001 chr3R_11175001 0.50 RAL-367 290 chr3R 11563032 11563062 jockey 4675 4705 13 30 '5-8 63.69 5.1 2.1 intron,intron fabp -,sea - chr3R_13_11560001 chr3R_11560001 0.38 RAL-367 291 chr3R 11565306 11565365 hobo 2 2922 10 59 '7-3 59.60 2.7 2.7 intron,intron fabp -,sea - chr3R_10_11565001 chr3R_11565001 0.70 RAL-367 292 chr3R 12719946 12720033 P-element 1 2882 11 87 '4-7 40.74 3.8 2.3 exon Men - chr3R_11_12715001 chr3R_12715001 0.36 RAL-367 293 chr3R 13119011 13119063 jockey 4668 4982 19 52 '14-5 61.88 5.2 3.1 intron timeout + chr3R_19_13115001 chr3R_13115001 0.74 RAL-367 294 chr3R 13631274 13631347 1360 2 3386 16 73 '10-6 62.54 3.4 3.6 3` UTR CR45594 - chr3R_16_13630001 chr3R_13630001 0.62 RAL-367 295 chr3R 13907874 13907950 pogo 2099 6 9 76 '4-5 69.78 3.2 2.1 intergenic not near genes chr3R_9_13905001 chr3R_13905001 0.44 RAL-367 296 chr3R 13937672 13937742 springer 380 8 10 70 '5-5 66.27 4.0 2.0 intergenic not near genes chr3R_10_13935001 chr3R_13935001 0.50 RAL-367 297 chr3R 14049352 14049410 transib2 11 2812 5 58 '2-3 56.85 4.3 0.9 intergenic not near genes chr3R_5_14045001 chr3R_14045001 0.40 RAL-367 298 chr3R 14308194 14308265 hobo 2934 2 9 71 '4-5 63.97 4.8 1.6 5` UTR su(Hw) - chr3R_9_14305001 chr3R_14305001 0.44 RAL-367 299 chr3R 14806398 14806473 opus 499 8 15 75 '12-3 63.23 3.8 3.1 3` UTR btsz - chr3R_15_14805001 chr3R_14805001 0.80 RAL-367 300 chr3R 14986372 14986413 P-element 2860 9 10 41 '4-6 42.71 3.0 2.5 intergenic not near genes chr3R_10_14985001 chr3R_14985001 0.40 RAL-367 301 chr3R 15091724 15091795 hobo 3 2935 12 71 '7-5 62.81 4.3 2.3 intron CG6966 - chr3R_12_15090001 chr3R_15090001 0.58 RAL-367 302 chr3R 15681612 15681664 hobo 2922 6 10 52 '2-8 61.97 3.6 2.2 intron pxb + chr3R_10_15680001 chr3R_15680001 0.20 RAL-367 303 chr3R 15724009 15724080 Max-element 298 8242 14 71 '9-5 58.52 4.9 2.4 intergenic not near genes chr3R_14_15720001 chr3R_15720001 0.64 RAL-367 304 chr3R 16448362 16448435 FB 1 2 20 73 '12-8 64.16 8.0 2.2 intron Pak3 - chr3R_20_16445001 chr3R_16445001 0.60 RAL-367 305 chr3R 17166524 17166545 Stalker 6848 6869 5 21 '1-4 60.58 5.1 0.8 intron Mur89F - chr3R_5_17165001 chr3R_17165001 0.20 RAL-367 306 chr3R 17166525 17166608 Stalker4 6956 411 18 83 '6-12 61.93 3.1 4.4 intron Mur89F - chr3R_18_17165001 chr3R_17165001 0.33 RAL-367 307 chr3R 17243122 17243153 hopper 1 27 4 31 '1-3 68.54 2.5 1.1 intron beat-IIb - chr3R_4_17240001 chr3R_17240001 0.25 RAL-367 308 chr3R 17288104 17288167 roo 406 8679 9 63 '6-3 65.63 3.0 2.2 5` UTR CR43490 + chr3R_9_17285001 chr3R_17285001 0.67 RAL-367 309 chr3R 17312823 17312902 roo 8663 406 13 79 '5-8 68.49 4.0 2.6 intergenic not near genes chr3R_13_17310001 chr3R_17310001 0.38 RAL-367 310 chr3R 17450540 17450620 Transpac 310 4921 12 80 '7-5 68.97 3.9 2.4 intergenic not near genes chr3R_12_17450001 chr3R_17450001 0.58 RAL-367 311 chr3R 17450638 17450717 HMS-Beagle 246 6799 9 79 '4-5 64.91 2.2 2.8 intergenic not near genes chr3R_9_17450001 chr3R_17450001 0.44 RAL-367 312 chr3R 17673763 17673825 FB 8 7 11 62 '4-7 70.18 6.4 1.5 exon,3` UTR ald +,alt - chr3R_11_17670001 chr3R_17670001 0.36 RAL-367 313 chr3R 17733259 17733280 INE-1 561 540 4 21 '2-2 72.00 3.4 0.9 intergenic Lgr1 +,CG14321 + chr3R_4_17730001 chr3R_17730001 0.50 RAL-367 314 chr3R 17944239 17944311 pogo 3 2092 16 72 '7-9 63.74 5.2 2.6 intron cpo + chr3R_16_17940001 chr3R_17940001 0.44 RAL-367 315 chr3R 18149259 18149338 roo 8665 408 6 79 '3-3 68.68 2.9 1.5 intergenic not near genes chr3R_6_18145001 chr3R_18145001 0.50 RAL-367 316 chr3R 18577136 18577212 1731 4317 316 15 76 '4-11 61.92 2.0 5.0 intron,intron CG7694 +,fray + chr3R_15_18575001 chr3R_18575001 0.27 RAL-367 317 chr3R 18809732 18809790 Tabor 486 6861 7 58 '6-1 62.58 1.3 3.0 intron CG18208 - chr3R_7_18805001 chr3R_18805001 0.86 RAL-367 318 chr3R 18903237 18903301 jockey 4990 4666 13 64 '4-9 61.55 4.1 2.5 intergenic CG34284 - chr3R_13_18900001 chr3R_18900001 0.31 RAL-367 319 chr3R 19764574 19764647 hopper 5 1412 13 73 '4-9 64.65 3.0 3.2 intron GluClalpha + chr3R_13_19760001 chr3R_19760001 0.31 RAL-367 320 chr3R 19807377 19807429 Quasimodo 25 7362 6 52 '2-4 72.22 3.4 1.4 intron bnl - chr3R_6_19805001 chr3R_19805001 0.33 RAL-367 321 chr3R 19939041 19939065 jockey 34 10 7 24 '4-3 63.29 3.2 1.7 intron Hs6st - chr3R_7_19935001 chr3R_19935001 0.57 RAL-367 322 chr3R 20124934 20124959 jockey 4705 4681 10 25 '5-5 71.98 2.5 2.9 intergenic not near genes chr3R_10_20120001 chr3R_20120001 0.50 RAL-367 323 chr3R 20379863 20379940 roo 8667 402 7 77 '5-2 62.29 1.2 3.2 3` UTR Gfrl - chr3R_7_20375001 chr3R_20375001 0.71 RAL-367 324 chr3R 20685479 20685500 blood 7017 27 5 21 '1-4 65.80 5.1 0.8 intergenic not near genes chr3R_5_20685001 chr3R_20685001 0.20 RAL-367 325 chr3R 20685852 20685927 Stalker4 399 6952 11 75 '5-6 60.76 3.1 2.7 intergenic not near genes chr3R_11_20685001 chr3R_20685001 0.45 RAL-367 326 chr3R 20685895 20685925 Stalker 28 6847 7 30 '3-4 66.86 2.5 2.0 intergenic not near genes chr3R_7_20685001 chr3R_20685001 0.43 RAL-367 327 chr3R 20696590 20696615 jockey 8 33 12 25 '7-5 58.81 5.9 1.7 intron Oamb - chr3R_12_20695001 chr3R_20695001 0.58 RAL-367 328 chr3R 20703183 20703267 flea 257 4756 8 84 '4-4 67.33 2.7 2.2 intron Oamb - chr3R_8_20700001 chr3R_20700001 0.50 RAL-367 329 chr3R 20985693 20985756 roo 9070 8680 19 63 '10-9 65.05 2.6 5.3 intron Calx + chr3R_19_20985001 chr3R_20985001 0.53 RAL-367 330 chr3R 21297366 21297439 P-element 2883 2886 17 73 '7-10 49.58 4.2 3.3 5` UTR Hsromega + chr3R_17_21295001 chr3R_21295001 0.41 RAL-367 331 chr3R 21313283 21313345 pogo 2091 12 5 62 '4-1 67.20 0.7 2.9 5` UTR Hsromega + chr3R_5_21310001 chr3R_21310001 0.80 RAL-367 332 chr3R 21487709 21487781 pogo 11 2098 8 72 '6-2 65.78 0.9 4.2 intergenic CG7922 + chr3R_8_21485001 chr3R_21485001 0.75 RAL-367 333 chr3R 22112892 22112923 copia 4869 4900 6 31 '4-2 64.45 7.2 0.7 intergenic not near genes chr3R_6_22110001 chr3R_22110001 0.67 RAL-367 334 chr3R 22310729 22310788 hopper 2 411 9 59 '4-5 57.04 1.8 3.2 3` UTR CG34377 - chr3R_9_22310001 chr3R_22310001 0.44 RAL-367 335 chr3R 22430545 22430620 297 6586 388 7 75 '6-1 64.43 3.1 1.7 intron CG13847 - chr3R_7_22430001 chr3R_22430001 0.86 RAL-367 336 chr3R 22627402 22627432 jockey 4725 4695 8 30 '3-5 60.67 3.7 1.7 intron loco - chr3R_8_22625001 chr3R_22625001 0.38 RAL-367 337 chr3R 22909851 22909895 mdg1 415 31 5 44 '3-2 66.13 3.1 1.2 intron klg + chr3R_5_22905001 chr3R_22905001 0.60 RAL-367 338 chr3R 24117469 24117550 opus 7114 7498 21 81 '8-13 70.37 3.6 4.6 intron Rootletin + chr3R_21_24115001 chr3R_24115001 0.38 RAL-367 339 chr3R 24272098 24272170 hopper 4 5 14 72 '7-7 68.35 2.2 4.4 intergenic not near genes chr3R_14_24270001 chr3R_24270001 0.50 RAL-367 340 chr3R 24436170 24436402 412 7070 7484 13 232 '12-1 64.60 3.6 2.8 intron nAChRalpha1 - chr3R_13_24435001 chr3R_24435001 0.92 RAL-367 341 chr3R 24447347 24447367 Doc 4688 4668 8 20 '3-5 55.67 1.7 3.0 intron nAChRalpha1 - chr3R_8_24445001 chr3R_24445001 0.38 RAL-367 342 chr3R 25286969 25287004 I-element 5330 7 9 35 '4-5 60.15 2.1 2.9 3` UTR CG31104 + chr3R_9_25285001 chr3R_25285001 0.44 RAL-367 343 chr3R 25388820 25388844 jockey 4762 4769 8 24 '2-6 59.54 3.8 1.7 intron Fur1 - chr3R_8_25385001 chr3R_25385001 0.25 RAL-367 344 chr3R 25420109 25420188 HMS-Beagle 245 6796 10 79 '3-7 67.38 5.1 1.6 intron Fur1 - chr3R_10_25420001 chr3R_25420001 0.30 RAL-367 345 chr3R 25589403 25589478 Tirant 4 397 12 75 '6-6 64.63 2.8 3.2 intron msi + chr3R_12_25585001 chr3R_25585001 0.50 RAL-367 346 chr3R 25888860 25888915 Ivk 5366 15 14 55 '6-8 59.24 3.8 2.9 5` UTR Lnk + chr3R_14_25885001 chr3R_25885001 0.43 RAL-367 347 chr3R 25906422 25906459 mdg1 390 13 7 37 '1-6 63.24 5.2 1.1 3` UTR CR43259 - chr3R_7_25905001 chr3R_25905001 0.14 RAL-367 348 chr3R 26128915 26128944 roo 9047 408 5 29 '2-3 68.69 1.4 2.1 intron CG31324 + chr3R_5_26125001 chr3R_26125001 0.40 RAL-367 349 chr3R 27301500 27301532 jockey 4958 4990 9 32 '3-6 61.63 3.5 2.0 intron CG3339 - chr3R_9_27300001 chr3R_27300001 0.33 RAL-367 350 chr3R 27379001 27379065 hobo 3 2937 14 64 '8-6 57.15 0.0 14.0 3` UTR side - chr3R_14_27375001 chr3R_27375001 0.57 RAL-367 351 chr3R 27783298 27783380 roo 8663 409 21 82 '10-11 68.82 3.9 4.3 intron CG34353 - chr3R_21_27780001 chr3R_27780001 0.48 RAL-367 352 chr3R 27791144 27791160 Doc 343 327 4 16 '2-2 60.00 0.0 4.0 intron CG34353 - chr3R_4_27790001 chr3R_27790001 0.50 RAL-367 353 chr3R 27911591 27911669 blood 7010 7385 25 78 '15-10 63.47 2.8 6.6 intergenic not near genes chr3R_25_27910001 chr3R_27910001 0.60 RAL-367 354 chr3R 28057197 28057212 Quasimodo 7360 7345 4 15 '3-1 64.20 7.1 0.5 intron CG34362 + chr3R_4_28055001 chr3R_28055001 0.75 RAL-367 355 chr3R 28138579 28138655 roo 410 8670 14 76 '7-7 67.54 2.4 4.1 intergenic not near genes chr3R_14_28135001 chr3R_28135001 0.50 RAL-367 356 chr3R 28302536 28302580 hobo 27 2932 6 44 '3-3 67.91 2.5 1.7 intergenic not near genes chr3R_6_28300001 chr3R_28300001 0.50 RAL-367 357 chr3R 28549020 28549087 mdg1 10 7455 8 67 '7-1 67.33 1.7 3.0 intergenic not near genes chr3R_8_28545001 chr3R_28545001 0.88 RAL-367 358 chr3R 28804949 28804969 jockey 13 33 10 20 '7-3 63.77 4.5 1.8 intergenic not near genes chr3R_10_28800001 chr3R_28800001 0.70 RAL-367 359 chr3R 29310019 29310139 mdg1 39 39 4 120 '2-2 74.56 0.3 3.1 intergenic not near genes chr3R_4_29310001 chr3R_29310001 0.50 RAL-367 360 chr3R 29705489 29705557 S-element 1702 2 8 68 '3-5 60.74 3.0 2.0 intergenic not near genes chr3R_8_29705001 chr3R_29705001 0.38 RAL-367 361 chr3R 30211964 30212028 Transpac 17 5228 13 64 '1-12 69.85 2.2 4.1 intergenic CecA2 + chr3R_13_30210001 chr3R_30210001 0.08 RAL-367 362 chr3R 30231721 30231783 roo 1 391 14 62 '11-3 66.04 3.0 3.5 intergenic not near genes chr3R_14_30230001 chr3R_30230001 0.79 RAL-367 363 chr3R 30385557 30385618 roo 8684 409 11 61 '5-6 74.67 1.8 3.9 intergenic Fer1HCH - chr3R_11_30385001 chr3R_30385001 0.45 RAL-367 364 chr3R 30406133 30406204 roo 400 1 16 71 '9-7 67.61 4.6 2.9 intergenic not near genes chr3R_16_30405001 chr3R_30405001 0.56 RAL-367 365 chr3R 30616648 30616726 roo 8664 406 15 78 '4-11 65.84 3.0 3.8 intergenic not near genes chr3R_15_30615001 chr3R_30615001 0.27 RAL-367 366 chr3R 31121326 31121372 Max-element 283 8234 11 46 '7-4 57.48 1.7 4.1 intergenic not near genes chr3R_11_31120001 chr3R_31120001 0.64 RAL-367 367 chr3R 31157399 31157453 412 7071 7537 4 54 '2-2 59.03 1.4 1.7 intron Gycbeta100B + chr3R_4_31155001 chr3R_31155001 0.50 RAL-367 368 chr3R 31457967 31458020 jockey 4971 3 12 53 '8-4 63.87 2.2 3.8 intergenic Gprk2 +,lox - chr3R_12_31455001 chr3R_31455001 0.67 RAL-367 369 chr4 227672 227730 P-element 2882 15 9 58 '2-7 46.74 2.0 3.0 intron CG31999 - chr4_9_225001 chr4_225001 0.22 RAL-367 370 chr4 311205 311590 1360 2 2 14 385 '5-9 66.13 0.5 9.3 3` UTR Zip102B - chr4_14_310001 chr4_310001 0.36 RAL-367 371 chr4 854902 854937 Doc 160 125 6 35 '4-2 65.33 0.8 3.3 intron CG11148 - chr4_6_850001 chr4_850001 0.67 RAL-367 372 chr4 856899 856924 F-element 223 248 7 25 '4-3 60.11 7.5 0.8 intron CG11148 - chr4_7_855001 chr4_855001 0.57 RAL-367 373 chr4 968125 968194 1360 3385 6 16 69 '6-10 66.20 3.7 3.4 intron fuss - chr4_16_965001 chr4_965001 0.38 RAL-367 374 chrX 690669 690739 opus 7488 7115 8 70 '4-4 71.67 2.7 2.2 intron sdk + chrX_8_690001 chrX_690001 0.50 RAL-367 375 chrX 711737 711816 297 1 392 4 79 '2-2 64.00 1.3 1.7 intron sdk + chrX_4_710001 chrX_710001 0.50 RAL-367 376 chrX 757606 757669 S-element 1697 2 5 63 '2-3 68.02 0.9 2.6 intron CG5254 + chrX_5_755001 chrX_755001 0.40 RAL-367 377 chrX 1185035 1185107 roo 8669 405 10 72 '8-2 65.59 3.9 2.0 5` UTR CG14626 + chrX_10_1185001 chrX_1185001 0.80 RAL-367 378 chrX 1800189 1800264 roo 8671 410 14 75 '6-8 67.34 3.4 3.2 intron CG42666 + chrX_14_1800001 chrX_1800001 0.43 RAL-367 379 chrX 2295906 2295990 Tirant 8112 404 23 84 '12-11 65.83 2.5 6.6 5` UTR phl + chrX_23_2295001 chrX_2295001 0.52 RAL-367 380 chrX 2593955 2594033 pogo 2098 3 11 78 '3-8 61.94 3.9 2.2 intron egh + chrX_11_2590001 chrX_2590001 0.27 RAL-367 381 chrX 2745149 2745221 FB 2 3 15 72 '8-7 64.30 3.6 3.3 intron kirre + chrX_15_2745001 chrX_2745001 0.53 RAL-367 382 chrX 2868385 2868407 412 489 7530 10 22 '7-3 57.49 4.3 1.9 intron kirre + chrX_10_2865001 chrX_2865001 0.70 RAL-367 383 chrX 3249225 3249308 mdg3 5251 247 14 83 '6-8 65.27 3.0 3.5 intron,exon dnc +,Pig1 - chrX_14_3245001 chrX_3245001 0.43 RAL-367 384 chrX 3254429 3254495 roo 3 397 15 66 '10-5 64.86 3.4 3.4 intron dnc + chrX_15_3250001 chrX_3250001 0.67 RAL-367 385 chrX 3304336 3304406 hobo 2932 1 11 70 '2-9 60.25 1.8 3.9 intron dnc + chrX_11_3300001 chrX_3300001 0.18 RAL-367 386 chrX 3468751 3468769 297 21 3 4 18 '3-1 63.33 1.5 1.6 intron,intron CR44999 +,CG12206 - chrX_4_3465001 chrX_3465001 0.75 RAL-367 387 chrX 3487308 3487377 Tc3 315 315 5 69 '2-3 61.94 2.9 1.3 intron,exon CR44999 +,CG10803 + chrX_5_3485001 chrX_3485001 0.40 RAL-367 388 chrX 3504890 3504959 roo 400 8666 5 69 '1-4 66.19 4.1 1.0 intron CR44999 + chrX_5_3500001 chrX_3500001 0.20 RAL-367 389 chrX 3901595 3901677 Transpac 309 4918 19 82 '8-11 64.05 3.4 4.3 intron CG42541 - chrX_19_3900001 chrX_3900001 0.42 RAL-367 390 chrX 4067103 4067169 I-element 5343 7 5 66 '2-3 55.47 0.3 3.8 intergenic not near genes chrX_5_4065001 chrX_4065001 0.40 RAL-367 391 chrX 4185922 4185995 1360 4 2 18 73 '11-7 64.87 2.2 5.6 intron Fas2 - chrX_18_4185001 chrX_4185001 0.61 RAL-367 392 chrX 4492614 4492696 mdg3 5250 5497 8 82 '5-3 69.50 2.3 2.4 intron CR32773 - chrX_8_4490001 chrX_4490001 0.62 RAL-367 393 chrX 4850554 4850603 hobo 2915 5 5 49 '1-4 60.80 3.8 1.0 intron CG42594 + chrX_5_4850001 chrX_4850001 0.20 RAL-367 394 chrX 6068894 6068954 P-element 3 14 4 60 '2-2 55.85 5.4 0.6 3` UTR CG5928 + chrX_4_6065001 chrX_6065001 0.50 RAL-367 395 chrX 6755732 6755747 transib4 154 169 4 15 '2-2 78.67 9.5 0.4 3` UTR CG14439 + chrX_4_6755001 chrX_6755001 0.50 RAL-367 396 chrX 6860901 6860984 S-element 1714 3 7 83 '6-1 67.09 2.7 1.9 intron,5` UTR CG14434 -,CR45531 + chrX_7_6860001 chrX_6860001 0.86 RAL-367 397 chrX 7154189 7154255 hobo 2709 2 8 66 '5-3 66.77 5.2 1.3 intron CG9650 + chrX_8_7150001 chrX_7150001 0.62 RAL-367 398 chrX 7269636 7269696 roo 8680 404 15 60 '4-11 64.00 4.0 3.0 intron CR44357 - chrX_15_7265001 chrX_7265001 0.27 RAL-367 399 chrX 7502804 7502885 opus 7113 494 10 81 '6-4 70.88 3.6 2.2 intergenic not near genes chrX_10_7500001 chrX_7500001 0.60 RAL-367 400 chrX 9019176 9019252 roo 8663 403 9 76 '5-4 70.97 3.5 2.0 intron,intron rdgA +,CR43836 - chrX_9_9015001 chrX_9015001 0.56 RAL-367 401 chrX 9383045 9383125 mdg3 247 5254 21 80 '14-7 64.27 2.9 5.4 intron mgl - chrX_21_9380001 chrX_9380001 0.67 RAL-367 402 chrX 9468180 9468207 hobo 4 31 7 27 '2-5 63.16 5.4 1.1 intron mgl - chrX_7_9465001 chrX_9465001 0.29 RAL-367 403 chrX 9600623 9600642 jockey 4760 4776 4 19 '2-2 65.26 7.9 0.4 intergenic Gga + chrX_4_9600001 chrX_9600001 0.50 RAL-367 404 chrX 10201728 10201797 mdg3 240 5258 7 69 '4-3 66.29 2.8 1.8 intron CR44894 - chrX_7_10200001 chrX_10200001 0.57 RAL-367 405 chrX 10757727 10757776 jockey 4994 4670 7 49 '2-5 55.72 4.2 1.3 intergenic Rph - chrX_7_10755001 chrX_10755001 0.29 RAL-367 406 chrX 10784710 10784779 1360 3382 3386 21 69 '12-9 66.20 3.7 4.5 intron,intron Ant2 -,sesB - chrX_21_10780001 chrX_10780001 0.57 RAL-367 407 chrX 11296403 11296433 BS 4987 5015 6 30 '2-4 64.73 5.7 0.9 intron CG44422 - chrX_6_11295001 chrX_11295001 0.33 RAL-367 408 chrX 12041525 12041599 297 9 395 9 74 '7-2 69.63 3.2 2.1 intergenic not near genes chrX_9_12040001 chrX_12040001 0.78 RAL-367 409 chrX 12392482 12392566 roo 411 8664 10 84 '6-4 71.33 1.3 4.3 intergenic not near genes chrX_10_12390001 chrX_12390001 0.60 RAL-367 410 chrX 12612178 12612259 pogo 2 2100 11 81 '5-6 69.50 1.4 4.6 intron,3` UTR CG2543 +,CR45621 - chrX_11_12610001 chrX_12610001 0.45 RAL-367 411 chrX 13208315 13208373 roo 9047 8662 4 58 '2-2 73.33 2.6 1.1 intron sno - chrX_4_13205001 chrX_13205001 0.50 RAL-367 412 chrX 13438666 13438702 BS 5075 8 5 36 '1-4 53.60 6.4 0.7 intergenic not near genes chrX_5_13435001 chrX_13435001 0.20 RAL-367 413 chrX 13446430 13446507 roo 8663 404 8 77 '3-5 72.94 2.2 2.5 intron Neto + chrX_8_13445001 chrX_13445001 0.38 RAL-367 414 chrX 13463037 13463123 Tirant 4 405 15 86 '5-10 65.32 2.1 4.8 intron Neto + chrX_15_13460001 chrX_13460001 0.33 RAL-367 415 chrX 13473415 13473496 roo 408 8663 9 81 '5-4 70.14 2.2 2.8 intron Neto + chrX_9_13470001 chrX_13470001 0.56 RAL-367 416 chrX 13495448 13495517 roo 8674 407 7 69 '4-3 66.47 1.0 3.5 intron Neto + chrX_7_13495001 chrX_13495001 0.57 RAL-367 417 chrX 13542827 13542881 412 9 19 9 54 '6-3 61.59 0.8 5.0 intergenic not near genes chrX_9_13540001 chrX_13540001 0.67 RAL-367 418 chrX 13786967 13787013 FB 15 16 5 46 '1-4 70.89 1.5 2.0 intron inaE + chrX_5_13785001 chrX_13785001 0.20 RAL-367 419 chrX 14343403 14343472 copia 243 4868 6 69 '2-4 63.55 2.1 1.9 intron dpr8 + chrX_6_14340001 chrX_14340001 0.33 RAL-367 420 chrX 14427624 14427684 pogo 2090 11 5 60 '1-4 67.75 1.3 2.2 intron dpr8 + chrX_5_14425001 chrX_14425001 0.20 RAL-367 421 chrX 15026029 15026060 FB 20 25 4 31 '3-1 65.58 2.5 1.1 intron,intron hiw -,be + chrX_4_15025001 chrX_15025001 0.75 RAL-367 422 chrX 15196179 15196256 roo 8664 405 8 77 '4-4 67.87 1.1 3.8 intergenic not near genes chrX_8_15195001 chrX_15195001 0.50 RAL-367 423 chrX 16101963 16102019 pogo 13 2086 10 56 '5-5 63.88 3.0 2.5 intron,intron CG42353 -,CG42354 - chrX_10_16100001 chrX_16100001 0.50 RAL-367 424 chrX 16109647 16109696 mdg3 5258 5472 6 49 '3-3 67.94 3.5 1.3 intergenic not near genes chrX_6_16105001 chrX_16105001 0.50 RAL-367 425 chrX 16911094 16911178 opus 498 111 9 84 '6-3 68.89 1.8 3.2 intron CR44754 - chrX_9_16910001 chrX_16910001 0.67 RAL-367 426 chrX 16989175 16989195 I-element 4 24 4 20 '2-2 66.34 5.6 0.6 intron CG45002 - chrX_4_16985001 chrX_16985001 0.50 RAL-367 427 chrX 17058794 17058866 flea 5013 4765 6 72 '3-3 71.84 1.7 2.2 intron CG45002 - chrX_6_17055001 chrX_17055001 0.50 RAL-367 428 chrX 17161609 17161648 FB 11 21 4 39 '3-1 64.69 0.7 2.4 intron baz + chrX_4_17160001 chrX_17160001 0.75 RAL-367 429 chrX 17520636 17520681 hopper 14 1393 5 45 '2-3 63.59 1.3 2.2 intron CG43658 - chrX_5_17520001 chrX_17520001 0.40 RAL-367 430 chrX 17576298 17576367 Transpac 4920 5217 10 69 '7-3 64.25 2.9 2.6 intron l(1)G0222 - chrX_10_17575001 chrX_17575001 0.70 RAL-367 431 chrX 17998274 17998341 roo 8674 405 7 67 '3-4 64.19 3.2 1.7 intron Sh - chrX_7_17995001 chrX_17995001 0.43 RAL-367 432 chrX 18128509 18128525 1360 8 3365 4 16 '1-3 60.00 8.5 0.4 intergenic mir-210 + chrX_4_18125001 chrX_18125001 0.25 RAL-367 433 chrX 18573555 18573607 opus 141 7499 11 52 '2-9 68.08 2.8 2.9 intergenic not near genes chrX_11_18570001 chrX_18570001 0.18 RAL-367 434 chrX 18842503 18842563 412 499 7080 10 60 '5-5 67.33 2.0 3.3 3` UTR Pvf1 + chrX_10_18840001 chrX_18840001 0.50 RAL-367 435 chrX 19670156 19670226 Juan 4212 1 8 70 '5-3 64.17 1.9 2.8 intron Zw + chrX_8_19670001 chrX_19670001 0.62 RAL-367 436 chrX 19847839 19847886 springer 7153 7502 7 47 '4-3 69.63 2.6 1.9 intron pico - chrX_7_19845001 chrX_19845001 0.57 RAL-367 437 chrX 19993326 19993397 roo 2 401 10 71 '7-3 65.20 3.8 2.1 intergenic not near genes chrX_10_19990001 chrX_19990001 0.70 RAL-367 438 chrX 20106329 20106356 hopper 6 1382 5 27 '4-1 61.07 3.0 1.2 intergenic not near genes chrX_5_20105001 chrX_20105001 0.80 RAL-367 439 chrX 20289575 20289659 mdg3 248 5251 22 84 '12-10 65.89 2.8 5.8 intergenic not near genes chrX_22_20285001 chrX_20285001 0.55 RAL-367 440 chrX 20330550 20330604 P-element 2865 2 8 54 '4-4 51.38 2.9 2.1 intergenic CG1504 - chrX_8_20330001 chrX_20330001 0.50 RAL-367 441 chrX 20348049 20348119 hopper 1407 1412 11 70 '3-8 62.85 3.5 2.4 intergenic not near genes chrX_11_20345001 chrX_20345001 0.27 RAL-367 442 chrX 20468276 20468339 P-element 2884 12 7 63 '3-4 49.62 2.3 2.1 5` UTR GstT3 + chrX_7_20465001 chrX_20465001 0.43 RAL-367 443 chrX 20553006 20553028 Ivk 5374 5352 8 22 '5-3 67.49 4.7 1.4 intron RunxB + chrX_8_20550001 chrX_20550001 0.62 RAL-367 444 chrX 21667898 21667932 gypsy2 29 6491 9 34 '6-3 69.18 0.0 9.0 intergenic not near genes chrX_9_21665001 chrX_21665001 0.67 RAL-367 445 chrX 21772480 21772497 springer 7155 7203 4 17 '3-1 64.05 4.5 0.7 intergenic not near genes chrX_4_21770001 chrX_21770001 0.75 RAL-367 446 chrX 22496855 22496920 roo 8674 403 11 65 '4-7 69.28 3.2 2.6 exon l(1)G0196 + chrX_11_22495001 chrX_22495001 0.36 RAL-367 447 chrX 22635755 22635824 Juan 4207 1 6 69 '2-4 69.55 3.1 1.5 intergenic not near genes chrX_6_22635001 chrX_22635001 0.33 RAL-367 448 chrX 22676051 22676115 pogo 2099 18 9 64 '7-2 63.64 2.4 2.6 intron CR44997 + chrX_9_22675001 chrX_22675001 0.78 RAL-367 449 chrX 22678388 22678463 Tirant 8114 404 13 75 '3-10 67.99 4.3 2.5 intron CR44997 + chrX_13_22675001 chrX_22675001 0.23 RAL-367 450 chrX 22759978 22760031 roo 9057 13 4 53 '2-2 62.67 0.4 2.9 intron CR44997 + chrX_4_22755001 chrX_22755001 0.50 RAL-367 451 chrX 22916247 22916311 Transpac 4 5222 6 64 '2-4 63.16 2.1 1.9 intergenic not near genes chrX_6_22915001 chrX_22915001 0.33 RAL-367 452 chrY 3648859 3648916 Transpac 5203 4918 7 57 '3-4 71.09 0.6 4.4 intergenic not near genes chrY_7_3645001 chrY_3645001 0.43 RAL-367